BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012936
(453 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|296089769|emb|CBI39588.3| unnamed protein product [Vitis vinifera]
Length = 472
Score = 736 bits (1899), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/442 (80%), Positives = 394/442 (89%)
Query: 9 ILAPRYCVLGENISGFGSNGLLRLKNPCGSTEVLLFPRGCRWFSTQAAVEPSTSDGLTVD 68
+L Y LG+N++GF S + NP G +V R R F +QAA E STSDGLTV+
Sbjct: 27 VLCSGYGFLGKNMTGFSSVMMETSINPSGFHQVSGNSRWVRQFGSQAAAEASTSDGLTVE 86
Query: 69 GIVASQWTILDESEGDWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDP 128
GI+A+QW ILDESE DWKSHAAAIA SI +IKKRLQWK L VRL++LSA+LNKP+LWD+P
Sbjct: 87 GIIANQWPILDESESDWKSHAAAIALSIHLIKKRLQWKKLVVRLDVLSAQLNKPDLWDNP 146
Query: 129 VHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKS 188
VHAG+ISREHG LMGKMK VK EQELLEHIDM+KLAREEND ELE ESL+ALL MRR S
Sbjct: 147 VHAGKISREHGMLMGKMKGVKNLEQELLEHIDMVKLAREENDPELESESLKALLGMRRNS 206
Query: 189 KEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMP 248
KEKEL+ALL+G+ D CSCYIEVQAGAGGTESMDWA+MV+QMYK WAQRRGY VT++DEMP
Sbjct: 207 KEKELEALLAGDHDSCSCYIEVQAGAGGTESMDWAAMVMQMYKMWAQRRGYGVTVVDEMP 266
Query: 249 GEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSS 308
GE AGIKRATIKVDGEY+FGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIP GD+S
Sbjct: 267 GETAGIKRATIKVDGEYSFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDAS 326
Query: 309 THVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMG 368
+HVQINESDLRIERFR+GGAGGQH NTT+SAVRI+HIPTG+TATCQNERSQHQNKASAM
Sbjct: 327 SHVQINESDLRIERFRAGGAGGQHVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMA 386
Query: 369 VLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSV 428
VLQSR++QLEI+RQAQ+NA+HTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSV
Sbjct: 387 VLQSRLDQLEISRQAQINAQHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSV 446
Query: 429 LEGDLDGFILSYLSASLDKDEG 450
LEGDLDGFILSYLSASLDKDEG
Sbjct: 447 LEGDLDGFILSYLSASLDKDEG 468
>gi|255542882|ref|XP_002512504.1| peptide chain release factor, putative [Ricinus communis]
gi|223548465|gb|EEF49956.1| peptide chain release factor, putative [Ricinus communis]
Length = 550
Score = 728 bits (1879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/451 (80%), Positives = 393/451 (87%), Gaps = 13/451 (2%)
Query: 9 ILAPRYCVLGENISGFGSNGLLRL-------KNPCGSTEVLLFPRGCRWFSTQAAVEPST 61
+LA VL N SGF S L R+ K+P ++ L F FSTQAAVE ST
Sbjct: 58 VLASGTGVLQRNFSGFASAQLPRVICRYECNKDPVNNSMWLYF------FSTQAAVELST 111
Query: 62 SDGLTVDGIVASQWTILDESEGDWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNK 121
+DGLTVDGIVA+ W ILDE+E DWKSHAAAIAQSIQVIKKRLQWK L VRL+LLS +LNK
Sbjct: 112 TDGLTVDGIVANNWIILDENESDWKSHAAAIAQSIQVIKKRLQWKKLMVRLDLLSVQLNK 171
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
P+LWDDPV AG+ISREHGSLM K KEV AFE+ELLEHIDMIKLAREE+D ELE ESL+AL
Sbjct: 172 PDLWDDPVLAGKISREHGSLMAKRKEVTAFERELLEHIDMIKLAREEDDAELESESLKAL 231
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
MRR SKEKEL+ALL+GE D CSCYIEVQ+GAGGTESMDWA MV+QMYK WAQRRGY V
Sbjct: 232 FHMRRNSKEKELEALLAGEQDSCSCYIEVQSGAGGTESMDWAKMVMQMYKLWAQRRGYNV 291
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
T++DEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI
Sbjct: 292 TVVDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 351
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P GD STHVQINESDLRIER+RSGG GGQHANTT+SAVRI+HIPTG+TATCQNERSQH
Sbjct: 352 PILGDGSTHVQINESDLRIERYRSGGPGGQHANTTESAVRIVHIPTGVTATCQNERSQHM 411
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
NKASAM VLQSR++QLE+ARQAQMNA+HTQSLT+ISWGNQIRTYVLHPYRMVKDLRTNYE
Sbjct: 412 NKASAMAVLQSRLDQLEMARQAQMNAQHTQSLTEISWGNQIRTYVLHPYRMVKDLRTNYE 471
Query: 422 VSDPDSVLEGDLDGFILSYLSASLDKDEGGQ 452
VSDPDSVLEG++DGFILSYLSASLDKDE Q
Sbjct: 472 VSDPDSVLEGEIDGFILSYLSASLDKDEDYQ 502
>gi|225450605|ref|XP_002277995.1| PREDICTED: peptide chain release factor 2-like [Vitis vinifera]
Length = 434
Score = 726 bits (1875), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/430 (81%), Positives = 387/430 (90%)
Query: 21 ISGFGSNGLLRLKNPCGSTEVLLFPRGCRWFSTQAAVEPSTSDGLTVDGIVASQWTILDE 80
++GF S + NP G +V R R F +QAA E STSDGLTV+GI+A+QW ILDE
Sbjct: 1 MTGFSSVMMETSINPSGFHQVSGNSRWVRQFGSQAAAEASTSDGLTVEGIIANQWPILDE 60
Query: 81 SEGDWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGS 140
SE DWKSHAAAIA SI +IKKRLQWK L VRL++LSA+LNKP+LWD+PVHAG+ISREHG
Sbjct: 61 SESDWKSHAAAIALSIHLIKKRLQWKKLVVRLDVLSAQLNKPDLWDNPVHAGKISREHGM 120
Query: 141 LMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGE 200
LMGKMK VK EQELLEHIDM+KLAREEND ELE ESL+ALL MRR SKEKEL+ALL+G+
Sbjct: 121 LMGKMKGVKNLEQELLEHIDMVKLAREENDPELESESLKALLGMRRNSKEKELEALLAGD 180
Query: 201 LDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIK 260
D CSCYIEVQAGAGGTESMDWA+MV+QMYK WAQRRGY VT++DEMPGE AGIKRATIK
Sbjct: 181 HDSCSCYIEVQAGAGGTESMDWAAMVMQMYKMWAQRRGYGVTVVDEMPGETAGIKRATIK 240
Query: 261 VDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRI 320
VDGEY+FGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIP GD+S+HVQINESDLRI
Sbjct: 241 VDGEYSFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDASSHVQINESDLRI 300
Query: 321 ERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIA 380
ERFR+GGAGGQH NTT+SAVRI+HIPTG+TATCQNERSQHQNKASAM VLQSR++QLEI+
Sbjct: 301 ERFRAGGAGGQHVNTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQSRLDQLEIS 360
Query: 381 RQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSY 440
RQAQ+NA+HTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSY
Sbjct: 361 RQAQINAQHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSY 420
Query: 441 LSASLDKDEG 450
LSASLDKDEG
Sbjct: 421 LSASLDKDEG 430
>gi|147834602|emb|CAN69654.1| hypothetical protein VITISV_010541 [Vitis vinifera]
Length = 426
Score = 724 bits (1869), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/417 (83%), Positives = 381/417 (91%)
Query: 34 NPCGSTEVLLFPRGCRWFSTQAAVEPSTSDGLTVDGIVASQWTILDESEGDWKSHAAAIA 93
NP G +V R R F +QAA E STSDGLTV+GI+A+QW ILDESE DWKSHAAAIA
Sbjct: 6 NPSGFHQVSGNSRWVRQFGSQAAAEASTSDGLTVEGIIANQWPILDESESDWKSHAAAIA 65
Query: 94 QSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQ 153
SI +IKKRLQWK L VRL++LSA+LNKP+LWD+PVHAG+ISREHG LMGKMK VK EQ
Sbjct: 66 LSIHLIKKRLQWKKLVVRLDVLSAQLNKPDLWDNPVHAGKISREHGMLMGKMKGVKNLEQ 125
Query: 154 ELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAG 213
ELLEHIDM+KLAREEND ELE ESL+ALL MRR SKEKEL+ALL+G+ D CSCYIEVQAG
Sbjct: 126 ELLEHIDMVKLAREENDPELESESLKALLGMRRNSKEKELEALLAGDHDSCSCYIEVQAG 185
Query: 214 AGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAE 273
AGGTESMDWA+MV+QMYK WAQRRGY VT++DEMPGE AGIKRATIKVDGEY+FGYAKAE
Sbjct: 186 AGGTESMDWAAMVMQMYKMWAQRRGYGVTVVDEMPGETAGIKRATIKVDGEYSFGYAKAE 245
Query: 274 VGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHA 333
VGVHRLVRISPFDSGKRRHTSFAAVAVIP GD+S+HVQINESDLRIERFR+GGAGGQH
Sbjct: 246 VGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDASSHVQINESDLRIERFRAGGAGGQHV 305
Query: 334 NTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSL 393
NTT+SAVRI+HIPTG+TATCQNERSQHQNKASAM VLQSR++QLEI+RQAQ+NA+HTQSL
Sbjct: 306 NTTESAVRIVHIPTGVTATCQNERSQHQNKASAMAVLQSRLDQLEISRQAQINAQHTQSL 365
Query: 394 TDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKDEG 450
TDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKDEG
Sbjct: 366 TDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKDEG 422
>gi|449523704|ref|XP_004168863.1| PREDICTED: peptide chain release factor 2-like [Cucumis sativus]
Length = 472
Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/439 (78%), Positives = 383/439 (87%), Gaps = 2/439 (0%)
Query: 11 APRYCVLGENISGFGSNGLLRLKNPCGSTEVLLFP-RGCRWFSTQAAVEPSTSDGLTVDG 69
AP Y IS + N L + ++ FP R FSTQ A EPSTSDGLTV+G
Sbjct: 31 APFYPSTSVFIS-YAQNFALWNRGITDFNKIFGFPFTTLRLFSTQIAFEPSTSDGLTVEG 89
Query: 70 IVASQWTILDESEGDWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPV 129
I+ ++WTILDESE DW+SHAAAIAQSI +IKKRLQWK L +RL LLS ELNK +LWDDP
Sbjct: 90 ILGNRWTILDESESDWRSHAAAIAQSIHLIKKRLQWKKLMMRLELLSVELNKADLWDDPA 149
Query: 130 HAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSK 189
HAG+ISREHGS+M K+KE+ AFE+ELLEHIDMIKLAREENDTELE ESL ALLTMRR S+
Sbjct: 150 HAGKISREHGSIMSKIKEINAFERELLEHIDMIKLAREENDTELESESLNALLTMRRNSR 209
Query: 190 EKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPG 249
EKEL+ALLSGE D CSCYIEVQAGAGGTESMDWA+MV+QMY WAQRRG++VT+M+EMPG
Sbjct: 210 EKELEALLSGENDSCSCYIEVQAGAGGTESMDWAAMVMQMYILWAQRRGFKVTVMEEMPG 269
Query: 250 EIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSST 309
EIAGIKRATIK+DGEYAFGYAK+EVGVHRLVRISPFDS KRRHTSFAAVAVIP +GD ST
Sbjct: 270 EIAGIKRATIKLDGEYAFGYAKSEVGVHRLVRISPFDSNKRRHTSFAAVAVIPITGDGST 329
Query: 310 HVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGV 369
HVQINESDLRIER+RSGGAGGQ NTTDSAVRI+HIPTGITATCQNERSQHQNKA+AM V
Sbjct: 330 HVQINESDLRIERYRSGGAGGQSVNTTDSAVRIVHIPTGITATCQNERSQHQNKAAAMAV 389
Query: 370 LQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVL 429
LQSR+NQLE+ RQAQMNA+HTQSL+DI+WGNQIR+YVLHPY+MVKDLRTNYEVSDPDSVL
Sbjct: 390 LQSRLNQLEMTRQAQMNAQHTQSLSDITWGNQIRSYVLHPYQMVKDLRTNYEVSDPDSVL 449
Query: 430 EGDLDGFILSYLSASLDKD 448
EGDLD FIL+YLSASLD D
Sbjct: 450 EGDLDSFILNYLSASLDND 468
>gi|449435599|ref|XP_004135582.1| PREDICTED: peptide chain release factor 2-like [Cucumis sativus]
Length = 467
Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/410 (82%), Positives = 374/410 (91%), Gaps = 1/410 (0%)
Query: 40 EVLLFP-RGCRWFSTQAAVEPSTSDGLTVDGIVASQWTILDESEGDWKSHAAAIAQSIQV 98
++ FP R FSTQ A EPSTSDGLTV+GI+ ++WTILDESE DW+SHAAAIAQSI +
Sbjct: 54 KIFGFPFTTLRLFSTQIAFEPSTSDGLTVEGILGNRWTILDESESDWRSHAAAIAQSIHL 113
Query: 99 IKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEH 158
IKKRLQWK L +RL LLS ELNK +LWDDP HAG+ISREHGS+M K+KE+ AFE+ELLEH
Sbjct: 114 IKKRLQWKKLMMRLELLSVELNKADLWDDPAHAGKISREHGSIMSKIKEINAFERELLEH 173
Query: 159 IDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTE 218
IDMIKLAREENDTELE ESL ALLTMRR S+EKEL+ALLSGE D CSCYIEVQAGAGGTE
Sbjct: 174 IDMIKLAREENDTELESESLNALLTMRRNSREKELEALLSGENDSCSCYIEVQAGAGGTE 233
Query: 219 SMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHR 278
SMDWA+MV+QMY WAQRRG++VT+M+EMPGEIAGIKRATIK+DGEYAFGYAK+EVGVHR
Sbjct: 234 SMDWAAMVMQMYILWAQRRGFKVTVMEEMPGEIAGIKRATIKLDGEYAFGYAKSEVGVHR 293
Query: 279 LVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDS 338
LVRISPFDS KRRHTSFAAVAVIP +GD STHVQINESDLRIER+RSGGAGGQ NTTDS
Sbjct: 294 LVRISPFDSNKRRHTSFAAVAVIPITGDGSTHVQINESDLRIERYRSGGAGGQSVNTTDS 353
Query: 339 AVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISW 398
AVRI+HIPTGITATCQNERSQHQNKA+AM VLQSR+NQLE+ RQAQMNA+HTQSL+DI+W
Sbjct: 354 AVRIVHIPTGITATCQNERSQHQNKAAAMAVLQSRLNQLEMTRQAQMNAQHTQSLSDITW 413
Query: 399 GNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKD 448
GNQIR+YVLHPY+MVKDLRTNYEVSDPDSVLEGDLD FIL+YLSASLD D
Sbjct: 414 GNQIRSYVLHPYQMVKDLRTNYEVSDPDSVLEGDLDSFILNYLSASLDND 463
>gi|224125026|ref|XP_002319484.1| predicted protein [Populus trichocarpa]
gi|222857860|gb|EEE95407.1| predicted protein [Populus trichocarpa]
Length = 488
Score = 698 bits (1801), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/399 (84%), Positives = 361/399 (90%)
Query: 51 FSTQAAVEPSTSDGLTVDGIVASQWTILDESEGDWKSHAAAIAQSIQVIKKRLQWKNLNV 110
FSTQAA E STSDG+TVDGIVAS WTILDESE DWKSHAAAIAQSIQVIK+RLQWK L V
Sbjct: 83 FSTQAAAELSTSDGITVDGIVASNWTILDESESDWKSHAAAIAQSIQVIKRRLQWKKLMV 142
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL+LLS +LNKP+LWDDPVHAG+ISREHGSLM KMK+V+ EQELLEHIDMIKLAREE+D
Sbjct: 143 RLDLLSVQLNKPDLWDDPVHAGKISREHGSLMAKMKKVRTLEQELLEHIDMIKLAREEDD 202
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
ELE E L+ALL MRR S EKE +ALLSGE D C CYIEVQAGAGGTESMDWA MV+QMY
Sbjct: 203 NELESEMLKALLQMRRNSNEKEQEALLSGEQDSCPCYIEVQAGAGGTESMDWAKMVMQMY 262
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
KSWAQR GY VT++DEMPGEIAGIKRATIKVDGEYAFGYAKAE GVHRLVRISPFDSGKR
Sbjct: 263 KSWAQRHGYGVTVVDEMPGEIAGIKRATIKVDGEYAFGYAKAEAGVHRLVRISPFDSGKR 322
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSFAAVAVIP D THV INESDLRIERFR+GGAGGQH NTT+SAVRI+HIPTGIT
Sbjct: 323 RHTSFAAVAVIPILRDGFTHVPINESDLRIERFRAGGAGGQHVNTTESAVRIVHIPTGIT 382
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
ATCQNERSQH NK SAM VLQSR++Q E+ARQAQMNA HTQSLTDI WGNQIR+YVLHPY
Sbjct: 383 ATCQNERSQHMNKDSAMAVLQSRLDQREMARQAQMNAYHTQSLTDIGWGNQIRSYVLHPY 442
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKDE 449
RMVKDLRTNYEV++PDSVLEG++DGFILSYLSA LDKDE
Sbjct: 443 RMVKDLRTNYEVTNPDSVLEGEIDGFILSYLSALLDKDE 481
>gi|356571075|ref|XP_003553706.1| PREDICTED: peptide chain release factor 2-like [Glycine max]
Length = 466
Score = 695 bits (1793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/391 (83%), Positives = 365/391 (93%)
Query: 59 PSTSDGLTVDGIVASQWTILDESEGDWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAE 118
PSTSDGLTV GI+A+ W ILDE++GDWKSHA AIAQSI +IK+RL W+ L VRL++LS +
Sbjct: 74 PSTSDGLTVQGILANNWNILDENDGDWKSHATAIAQSIHLIKRRLHWEKLKVRLDMLSFQ 133
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
L+K +LWDDPV AG+ISREHGSL+GKMKEV AFEQELLEHIDMIKLAREEND +LE ESL
Sbjct: 134 LSKEDLWDDPVRAGKISREHGSLLGKMKEVNAFEQELLEHIDMIKLAREENDADLESESL 193
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
+ALL MRR +KEKEL+ALLSGE D CSCYIEVQAGAGGTESMDWA+MV+QMYKSWAQ+RG
Sbjct: 194 KALLNMRRNAKEKELEALLSGEQDSCSCYIEVQAGAGGTESMDWAAMVMQMYKSWAQQRG 253
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
Y+VT++DEMPGEIAGIKRATIKVDGE+AFGYAKAE+GVHRLVRISPFDS KRRHTSFAAV
Sbjct: 254 YKVTVVDEMPGEIAGIKRATIKVDGEFAFGYAKAEIGVHRLVRISPFDSNKRRHTSFAAV 313
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
AVIP GD STHVQINESDLRIERFR+GGAGGQH NTT+SAVRI+HIPTG+TATCQNERS
Sbjct: 314 AVIPILGDGSTHVQINESDLRIERFRAGGAGGQHVNTTESAVRIVHIPTGVTATCQNERS 373
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
QHQNKASAM VLQSR++QLE+ARQAQ NA+HTQSLTDI+WG+QIR+YVLHPYRMVKDLRT
Sbjct: 374 QHQNKASAMAVLQSRLDQLEMARQAQFNAQHTQSLTDITWGSQIRSYVLHPYRMVKDLRT 433
Query: 419 NYEVSDPDSVLEGDLDGFILSYLSASLDKDE 449
NYEVSDPDSVLEGDLD FILSYLSASLDKD+
Sbjct: 434 NYEVSDPDSVLEGDLDSFILSYLSASLDKDD 464
>gi|12323033|gb|AAG51510.1|AC058785_13 peptide chain release factor 2, putative [Arabidopsis thaliana]
Length = 426
Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/406 (80%), Positives = 367/406 (90%)
Query: 44 FPRGCRWFSTQAAVEPSTSDGLTVDGIVASQWTILDESEGDWKSHAAAIAQSIQVIKKRL 103
F R S++A +T DGLTV+ I+A+QW ILDE+EGDWKSHAAAIAQSIQVIK+RL
Sbjct: 18 FASSTRSLSSEAVAVAATCDGLTVERIIANQWPILDENEGDWKSHAAAIAQSIQVIKRRL 77
Query: 104 QWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIK 163
QWK L VRL +LSAELNK +LWDDP HAG+ISREHGSL GKMK V FE+ELLEHIDM+K
Sbjct: 78 QWKKLLVRLKVLSAELNKSDLWDDPTHAGKISREHGSLTGKMKGVMTFERELLEHIDMLK 137
Query: 164 LAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWA 223
LA+EEND+ELE E+L+AL+ MRR SKEKEL+ALLS + DPCSCYIEVQAGAGGTES DWA
Sbjct: 138 LAKEENDSELESETLKALIDMRRVSKEKELEALLSADNDPCSCYIEVQAGAGGTESNDWA 197
Query: 224 SMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRIS 283
+MV++MYK+WAQRR + VT++DE PGEIAGIKRATIKV+GEYA+GYAKAEVGVHRLVRIS
Sbjct: 198 AMVMEMYKTWAQRRKFSVTVVDEAPGEIAGIKRATIKVNGEYAYGYAKAEVGVHRLVRIS 257
Query: 284 PFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRII 343
PFDSGKRRHTSFAAVAVIP GD ST V+IN+SDLRIERFRSGGAGGQHANTTDSAVRI+
Sbjct: 258 PFDSGKRRHTSFAAVAVIPILGDGSTRVEINDSDLRIERFRSGGAGGQHANTTDSAVRIV 317
Query: 344 HIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIR 403
HIPTGITATCQNERSQH NKASAM VLQSR++QLE+ARQ MNA+HTQSLT+ISWGNQIR
Sbjct: 318 HIPTGITATCQNERSQHSNKASAMAVLQSRLDQLEMARQTAMNAQHTQSLTEISWGNQIR 377
Query: 404 TYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKDE 449
TYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILS+LS+SLDKD+
Sbjct: 378 TYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSFLSSSLDKDD 423
>gi|42562784|ref|NP_176032.2| Peptide chain release factor 2 [Arabidopsis thaliana]
gi|332195261|gb|AEE33382.1| Peptide chain release factor 2 [Arabidopsis thaliana]
Length = 482
Score = 688 bits (1775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/406 (80%), Positives = 367/406 (90%)
Query: 44 FPRGCRWFSTQAAVEPSTSDGLTVDGIVASQWTILDESEGDWKSHAAAIAQSIQVIKKRL 103
F R S++A +T DGLTV+ I+A+QW ILDE+EGDWKSHAAAIAQSIQVIK+RL
Sbjct: 74 FASSTRSLSSEAVAVAATCDGLTVERIIANQWPILDENEGDWKSHAAAIAQSIQVIKRRL 133
Query: 104 QWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIK 163
QWK L VRL +LSAELNK +LWDDP HAG+ISREHGSL GKMK V FE+ELLEHIDM+K
Sbjct: 134 QWKKLLVRLKVLSAELNKSDLWDDPTHAGKISREHGSLTGKMKGVMTFERELLEHIDMLK 193
Query: 164 LAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWA 223
LA+EEND+ELE E+L+AL+ MRR SKEKEL+ALLS + DPCSCYIEVQAGAGGTES DWA
Sbjct: 194 LAKEENDSELESETLKALIDMRRVSKEKELEALLSADNDPCSCYIEVQAGAGGTESNDWA 253
Query: 224 SMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRIS 283
+MV++MYK+WAQRR + VT++DE PGEIAGIKRATIKV+GEYA+GYAKAEVGVHRLVRIS
Sbjct: 254 AMVMEMYKTWAQRRKFSVTVVDEAPGEIAGIKRATIKVNGEYAYGYAKAEVGVHRLVRIS 313
Query: 284 PFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRII 343
PFDSGKRRHTSFAAVAVIP GD ST V+IN+SDLRIERFRSGGAGGQHANTTDSAVRI+
Sbjct: 314 PFDSGKRRHTSFAAVAVIPILGDGSTRVEINDSDLRIERFRSGGAGGQHANTTDSAVRIV 373
Query: 344 HIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIR 403
HIPTGITATCQNERSQH NKASAM VLQSR++QLE+ARQ MNA+HTQSLT+ISWGNQIR
Sbjct: 374 HIPTGITATCQNERSQHSNKASAMAVLQSRLDQLEMARQTAMNAQHTQSLTEISWGNQIR 433
Query: 404 TYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKDE 449
TYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILS+LS+SLDKD+
Sbjct: 434 TYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSFLSSSLDKDD 479
>gi|297848140|ref|XP_002891951.1| hypothetical protein ARALYDRAFT_474798 [Arabidopsis lyrata subsp.
lyrata]
gi|297337793|gb|EFH68210.1| hypothetical protein ARALYDRAFT_474798 [Arabidopsis lyrata subsp.
lyrata]
Length = 470
Score = 685 bits (1768), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/401 (81%), Positives = 366/401 (91%)
Query: 49 RWFSTQAAVEPSTSDGLTVDGIVASQWTILDESEGDWKSHAAAIAQSIQVIKKRLQWKNL 108
R +++A +T DGLTV+ I+A+QW ILDE+E DWKSHAAAI+QSIQVIK+RLQWK L
Sbjct: 67 RSLNSEAVAVAATCDGLTVERIIANQWPILDENESDWKSHAAAISQSIQVIKRRLQWKKL 126
Query: 109 NVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREE 168
VRL +LSAELNKP+LW+DP+HAG+ISREHGSL GKMK V FE+ELLEHIDM+KLA+EE
Sbjct: 127 LVRLKVLSAELNKPDLWNDPIHAGKISREHGSLTGKMKGVMTFERELLEHIDMLKLAKEE 186
Query: 169 NDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQ 228
NDTELE E+L+A++ MRR SKEKEL+ALLS E DPCSCYIEVQAGAGGTES DWASMV++
Sbjct: 187 NDTELESETLKAMMDMRRVSKEKELEALLSAENDPCSCYIEVQAGAGGTESNDWASMVME 246
Query: 229 MYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSG 288
MYK+WAQRR + VT++DE GEIAGIKRATIKV+GEY++GYAKAEVGVHRLVRISPFDSG
Sbjct: 247 MYKTWAQRRKFSVTVVDEAAGEIAGIKRATIKVNGEYSYGYAKAEVGVHRLVRISPFDSG 306
Query: 289 KRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTG 348
KRRHTSFAAVAVIP GD ST VQIN+SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTG
Sbjct: 307 KRRHTSFAAVAVIPILGDGSTRVQINDSDLRIERFRSGGAGGQHANTTDSAVRIIHIPTG 366
Query: 349 ITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLH 408
ITATCQNERSQH NKASAM VLQSR++QLE+ARQ MNA+HTQSLT+ISWGNQIRTYVLH
Sbjct: 367 ITATCQNERSQHMNKASAMAVLQSRLDQLEMARQTAMNAQHTQSLTEISWGNQIRTYVLH 426
Query: 409 PYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKDE 449
PYRMVKDLRTNYEVSDPDSVLEGDLDGFILS+LS+SLDKD+
Sbjct: 427 PYRMVKDLRTNYEVSDPDSVLEGDLDGFILSFLSSSLDKDD 467
>gi|12321742|gb|AAG50902.1|AC069159_3 peptide chain release factor 2, putative [Arabidopsis thaliana]
Length = 524
Score = 651 bits (1680), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/441 (72%), Positives = 359/441 (81%), Gaps = 33/441 (7%)
Query: 44 FPRGCRWFSTQAAVEPSTSDGLTVDGIVASQWTILDESEGDWKSHAAAIAQSIQVIKKRL 103
F R S++A +T DGLTV+ I+A+QW ILDE+EGDWKSHAAAIAQSIQVIK+RL
Sbjct: 71 FASSTRSLSSEAVAVAATCDGLTVERIIANQWPILDENEGDWKSHAAAIAQSIQVIKRRL 130
Query: 104 QWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIK 163
QWK L VRL +LSAELNK +LWDDP HAG+ISREHGSL GKMK V FE+ELLEHIDM+K
Sbjct: 131 QWKKLLVRLKVLSAELNKSDLWDDPTHAGKISREHGSLTGKMKGVMTFERELLEHIDMLK 190
Query: 164 LAREENDTELE----------------------------LESLEALLTMRRKSKEKELDA 195
LA+EEND+ELE E+L+AL+ MRR SKEKEL+A
Sbjct: 191 LAKEENDSELESVGVLALISQTLGMFSFSVSVSLGMINPKETLKALIDMRRVSKEKELEA 250
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLS + DPCSCYIEVQAGAGGTES DWA+MV++MYK+WAQRR + VT++DE PGEIAGIK
Sbjct: 251 LLSADNDPCSCYIEVQAGAGGTESNDWAAMVMEMYKTWAQRRKFSVTVVDEAPGEIAGIK 310
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
RATIKV+GEYA+GYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIP GD ST V+IN+
Sbjct: 311 RATIKVNGEYAYGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDGSTRVEIND 370
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SDLRIERFRSGGAGGQHANTTDSAVRI+HIPTGITATCQNERSQH NKASAM VLQSR++
Sbjct: 371 SDLRIERFRSGGAGGQHANTTDSAVRIVHIPTGITATCQNERSQHSNKASAMAVLQSRLD 430
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
QLE+ARQ MNA+HTQSLT+ISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLD
Sbjct: 431 QLEMARQTAMNAQHTQSLTEISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDE 490
Query: 436 -----FILSYLSASLDKDEGG 451
++ L KD GG
Sbjct: 491 SSTYVYLKRLFITKLRKDLGG 511
>gi|115452569|ref|NP_001049885.1| Os03g0305700 [Oryza sativa Japonica Group]
gi|108707729|gb|ABF95524.1| peptide chain release factor 2 family protein, expressed [Oryza
sativa Japonica Group]
gi|113548356|dbj|BAF11799.1| Os03g0305700 [Oryza sativa Japonica Group]
gi|215707188|dbj|BAG93648.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 468
Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/402 (75%), Positives = 349/402 (86%), Gaps = 2/402 (0%)
Query: 48 CRWFSTQAAVE--PSTSDGLTVDGIVASQWTILDESEGDWKSHAAAIAQSIQVIKKRLQW 105
RWFS+ A V P T+DGLTVD I WTIL E+E DW+SHAAA+AQS+++IKKRL+W
Sbjct: 65 TRWFSSPATVAEAPMTADGLTVDSIAGKGWTILPEAESDWRSHAAAVAQSVKLIKKRLKW 124
Query: 106 KNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLA 165
+ R LS L +P+LWDDPV AG++SREHG LMGK+K V FEQEL+EHIDM++LA
Sbjct: 125 GWILERSRQLSVVLERPDLWDDPVFAGKVSREHGELMGKIKSVNQFEQELMEHIDMLRLA 184
Query: 166 REENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASM 225
REE+D ELE E++ AL MRR +KEKEL+ALLSG+ D CSC+IEVQAGAGGTESMDWA+M
Sbjct: 185 REEDDNELETETMRALAEMRRSAKEKELNALLSGDNDSCSCFIEVQAGAGGTESMDWAAM 244
Query: 226 VLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPF 285
V+ MY SWAQRRGY V++++EMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPF
Sbjct: 245 VMNMYSSWAQRRGYTVSIIEEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPF 304
Query: 286 DSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHI 345
DSGKRRHTSFAAVAV+P GD ST QI +SDLRIERFRSGG GGQHAN T+SAVRI+HI
Sbjct: 305 DSGKRRHTSFAAVAVVPILGDGSTRYQIKDSDLRIERFRSGGPGGQHANCTESAVRIVHI 364
Query: 346 PTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTY 405
PTGITATCQNERSQH NKASAM VLQSR++QLEIARQAQMNA+HTQSL++ISWGNQIR+Y
Sbjct: 365 PTGITATCQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNADHTQSLSEISWGNQIRSY 424
Query: 406 VLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDK 447
VLHPYRMVKDLRTNYEVSDPDSVL GDLD FIL++LS SLD+
Sbjct: 425 VLHPYRMVKDLRTNYEVSDPDSVLNGDLDDFILNFLSTSLDE 466
>gi|125543555|gb|EAY89694.1| hypothetical protein OsI_11230 [Oryza sativa Indica Group]
Length = 468
Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/402 (75%), Positives = 349/402 (86%), Gaps = 2/402 (0%)
Query: 48 CRWFSTQAAVE--PSTSDGLTVDGIVASQWTILDESEGDWKSHAAAIAQSIQVIKKRLQW 105
RWFS+ A V P T+DGLTVD I WTIL E+E DW+SHAAA+AQS+++IKKRL+W
Sbjct: 65 TRWFSSPATVAEAPMTADGLTVDSIAGKGWTILPEAESDWRSHAAAVAQSVKLIKKRLKW 124
Query: 106 KNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLA 165
+ R LS L +P+LWDDPV AG++SREHG LMGK+K V FEQEL+EHIDM++LA
Sbjct: 125 GWILERSRQLSVVLERPDLWDDPVFAGKVSREHGELMGKIKSVNQFEQELMEHIDMLRLA 184
Query: 166 REENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASM 225
REE+D ELE E++ AL MRR +KEKEL+ALLSG+ D CSC+IEVQAGAGGTESMDWA+M
Sbjct: 185 REEDDNELETETMRALAEMRRSAKEKELNALLSGDNDSCSCFIEVQAGAGGTESMDWAAM 244
Query: 226 VLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPF 285
V+ MY SWAQRRGY V++++EMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPF
Sbjct: 245 VMNMYSSWAQRRGYTVSIIEEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPF 304
Query: 286 DSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHI 345
DSGKRRHTSFAAVAV+P GD ST QI +SDLRIERFRSGG GGQHAN T+SAVRI+HI
Sbjct: 305 DSGKRRHTSFAAVAVVPILGDGSTRYQIKDSDLRIERFRSGGPGGQHANCTESAVRIVHI 364
Query: 346 PTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTY 405
PTGITATCQNERSQH NKASAM VLQSR++QLEIARQAQMNA+HTQSL++ISWGNQIR+Y
Sbjct: 365 PTGITATCQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNADHTQSLSEISWGNQIRSY 424
Query: 406 VLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDK 447
VLHPYRMVKDLRTNYEVSDPDSVL GDLD FIL++LS SLD+
Sbjct: 425 VLHPYRMVKDLRTNYEVSDPDSVLNGDLDDFILNFLSTSLDE 466
>gi|242041179|ref|XP_002467984.1| hypothetical protein SORBIDRAFT_01g037550 [Sorghum bicolor]
gi|241921838|gb|EER94982.1| hypothetical protein SORBIDRAFT_01g037550 [Sorghum bicolor]
Length = 467
Score = 641 bits (1653), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/404 (75%), Positives = 353/404 (87%), Gaps = 4/404 (0%)
Query: 48 CRWFS---TQAAVE-PSTSDGLTVDGIVASQWTILDESEGDWKSHAAAIAQSIQVIKKRL 103
RWFS T+A E P T+DGLTVD I WTIL E++ DW+SHAAA+AQS+++IKKRL
Sbjct: 59 VRWFSSPSTEALAEAPMTADGLTVDSIADKGWTILPEADSDWRSHAAAVAQSVKLIKKRL 118
Query: 104 QWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIK 163
+W + R L+ L +P+LW+DPV AGR+SRE G LMGK+K V FEQEL+EHI+M++
Sbjct: 119 KWGWILERTKQLAVVLERPDLWEDPVFAGRVSREQGELMGKIKSVNQFEQELIEHIEMLR 178
Query: 164 LAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWA 223
LAREEND ELE+ES+ AL MRR +KEKEL+ALLSG+ D C C+IEVQAGAGGTESMDWA
Sbjct: 179 LAREENDNELEMESMRALADMRRSAKEKELNALLSGDNDSCPCFIEVQAGAGGTESMDWA 238
Query: 224 SMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRIS 283
+MV+ MY+SWAQRRGY VT+++EMPGE+AGIKRATIKVDGEYAFGYAKAEVGVHRLVRIS
Sbjct: 239 AMVMNMYRSWAQRRGYTVTVVEEMPGEVAGIKRATIKVDGEYAFGYAKAEVGVHRLVRIS 298
Query: 284 PFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRII 343
PFDSGKRRHTSFAAVAVIP GD+++ QI +SDLRIERFRSGG GGQHANTT+SA+RI+
Sbjct: 299 PFDSGKRRHTSFAAVAVIPILGDAASRYQIKDSDLRIERFRSGGPGGQHANTTESAIRIV 358
Query: 344 HIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIR 403
HIPTGI+ATCQNERSQH NKASAM VLQSR++QLEIARQAQMNAEHTQSL +ISWGNQIR
Sbjct: 359 HIPTGISATCQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNAEHTQSLNEISWGNQIR 418
Query: 404 TYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDK 447
+YVLHPYRMVKDLRTNYEVSDPDSVLEGD+D FIL+YLS+SLD+
Sbjct: 419 SYVLHPYRMVKDLRTNYEVSDPDSVLEGDIDDFILNYLSSSLDE 462
>gi|326491925|dbj|BAJ98187.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 465
Score = 640 bits (1652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/408 (75%), Positives = 352/408 (86%), Gaps = 4/408 (0%)
Query: 42 LLFPRGCRWFSTQAAV--EPSTSDGLTVDGIVASQWTILDESEGDWKSHAAAIAQSIQVI 99
LL P RWFS+ A V P T DGLTVD I WTIL ++E DW+SHAAA+AQSI++I
Sbjct: 55 LLEP--TRWFSSPAPVVEAPRTVDGLTVDSIADKGWTILADAESDWRSHAAAVAQSIRLI 112
Query: 100 KKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHI 159
KKRL+WK L R L+ L KP+LW+DPV AG++SRE G LMGK+K V FEQ+L+EHI
Sbjct: 113 KKRLKWKWLLERSKQLAVVLEKPDLWEDPVFAGKVSREQGELMGKIKSVNQFEQQLMEHI 172
Query: 160 DMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTES 219
DM++LAR+E D ELE ES+ AL MRR++KEKEL+ALLSG+ DP C+IEVQAGAGG ES
Sbjct: 173 DMLRLARDEGDNELETESMRALADMRREAKEKELNALLSGDNDPYPCFIEVQAGAGGVES 232
Query: 220 MDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRL 279
MDWA+MV+ MYKSWAQRRGYRVT+++EMPGE+AGIKRATIKVDGEYAFGYAK+E+GVHRL
Sbjct: 233 MDWAAMVMNMYKSWAQRRGYRVTVIEEMPGELAGIKRATIKVDGEYAFGYAKSEIGVHRL 292
Query: 280 VRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSA 339
VRISPFDSGKRRHTSFAAVAVIP G+SS+ QINESDLRIERFRSGG GGQHANTT+SA
Sbjct: 293 VRISPFDSGKRRHTSFAAVAVIPILGESSSRYQINESDLRIERFRSGGPGGQHANTTESA 352
Query: 340 VRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWG 399
VRI+HIPTG TATCQNERSQH N+ASAM VLQSR++QLEI RQAQMNAEHTQSL++ISWG
Sbjct: 353 VRIVHIPTGTTATCQNERSQHMNRASAMAVLQSRLDQLEITRQAQMNAEHTQSLSEISWG 412
Query: 400 NQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDK 447
NQIR+YVL PYRMVKDLRTNYEVSDPDSVLEGDLD FILS+LS SLDK
Sbjct: 413 NQIRSYVLQPYRMVKDLRTNYEVSDPDSVLEGDLDDFILSFLSLSLDK 460
>gi|357112579|ref|XP_003558086.1| PREDICTED: peptide chain release factor 2-like [Brachypodium
distachyon]
Length = 465
Score = 640 bits (1651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/405 (74%), Positives = 351/405 (86%), Gaps = 2/405 (0%)
Query: 48 CRWFSTQAAV--EPSTSDGLTVDGIVASQWTILDESEGDWKSHAAAIAQSIQVIKKRLQW 105
RWFS+ A V P T+DG+TVD I WTIL E+E DW+SHAAA+AQSI++IKKRL+W
Sbjct: 59 ARWFSSPAPVVEAPRTADGMTVDAIADKGWTILAEAESDWRSHAAAVAQSIKLIKKRLKW 118
Query: 106 KNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLA 165
K L R L+ L +P+LW+DPV AG++SRE G LMGK+K V FEQEL+EHIDM++LA
Sbjct: 119 KWLLERSKQLAVVLERPDLWEDPVFAGKVSREQGELMGKIKSVNQFEQELMEHIDMLRLA 178
Query: 166 REENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASM 225
REE D ELE ES+ AL MRR +KEKEL+ALLSG+ D C+IEVQAGAGG ESMDWA+M
Sbjct: 179 REEGDNELETESMRALADMRRNAKEKELNALLSGDNDSYPCFIEVQAGAGGIESMDWAAM 238
Query: 226 VLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPF 285
V+ MY+SWAQRRGY VT+++EMPGE+AGIKRATIKVDG+YAFGYAK+E+GVHRLVRISPF
Sbjct: 239 VMNMYRSWAQRRGYAVTVVEEMPGEVAGIKRATIKVDGDYAFGYAKSEIGVHRLVRISPF 298
Query: 286 DSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHI 345
DSGKRRHTSFAAVAVIP GD+S+ QIN+SDLRIERFRSGG GGQHANTT+SAVRI+HI
Sbjct: 299 DSGKRRHTSFAAVAVIPILGDASSRYQINDSDLRIERFRSGGPGGQHANTTESAVRIVHI 358
Query: 346 PTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTY 405
PTG TATCQNERSQH NKASAM VLQSR++QLEI RQAQMNAEHTQSL++ISWGNQIR+Y
Sbjct: 359 PTGTTATCQNERSQHMNKASAMAVLQSRLDQLEITRQAQMNAEHTQSLSEISWGNQIRSY 418
Query: 406 VLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKDEG 450
VLHPYRMVKDLRTNYEVSDPDSVLEGDLD FI ++LS+SLDKD+G
Sbjct: 419 VLHPYRMVKDLRTNYEVSDPDSVLEGDLDDFIFNFLSSSLDKDDG 463
>gi|226528475|ref|NP_001148129.1| peptide chain release factor 2 [Zea mays]
gi|195616002|gb|ACG29831.1| peptide chain release factor 2 [Zea mays]
Length = 467
Score = 637 bits (1644), Expect = e-180, Method: Compositional matrix adjust.
Identities = 303/403 (75%), Positives = 353/403 (87%), Gaps = 4/403 (0%)
Query: 49 RWFST---QAAVE-PSTSDGLTVDGIVASQWTILDESEGDWKSHAAAIAQSIQVIKKRLQ 104
RW S+ +A E P T+DGLTVD I WTIL E+E DW+SHAAA+AQS++VIKKRL+
Sbjct: 60 RWLSSPSSEAVAEVPMTADGLTVDSIADKGWTILPEAESDWRSHAAAVAQSVKVIKKRLK 119
Query: 105 WKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKL 164
W + R L+ L KP+LW+DPV AGR+SRE G LMGK+K V FEQEL+EHI+M++L
Sbjct: 120 WGWILERTKQLAVVLEKPDLWEDPVFAGRVSREQGELMGKIKSVNQFEQELIEHIEMLRL 179
Query: 165 AREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWAS 224
AREEND ELE+ES++AL MRR +KEKEL+ALLSG+ D CSC+IEVQAGAGGTESMDWA+
Sbjct: 180 AREENDNELEMESMKALADMRRSAKEKELNALLSGDNDSCSCFIEVQAGAGGTESMDWAA 239
Query: 225 MVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISP 284
MV+ MY+SWAQRRGY++T+++EM GE+AGIKRATIKVDGEYAFGYAKAEVGVHRLVRISP
Sbjct: 240 MVMNMYRSWAQRRGYKITVVEEMSGEVAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISP 299
Query: 285 FDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIH 344
FDSGKRRHTSFAAVAVIP GD+++ QI +SDLRIERFRSGG GGQHANTT+SA+RI+H
Sbjct: 300 FDSGKRRHTSFAAVAVIPILGDTTSRYQIKDSDLRIERFRSGGPGGQHANTTESAIRIVH 359
Query: 345 IPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRT 404
IPTGI+AT QNERSQH NKASAM VLQSR++QLEIARQAQMNAEHTQSL +ISWGNQIR+
Sbjct: 360 IPTGISATSQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNAEHTQSLNEISWGNQIRS 419
Query: 405 YVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDK 447
YVLHPYRMVKDLRTNYEVSDPDSVLEGDLD FIL+YLS+SLD+
Sbjct: 420 YVLHPYRMVKDLRTNYEVSDPDSVLEGDLDDFILNYLSSSLDE 462
>gi|219887937|gb|ACL54343.1| unknown [Zea mays]
gi|413939254|gb|AFW73805.1| hypothetical protein ZEAMMB73_768662 [Zea mays]
Length = 467
Score = 637 bits (1644), Expect = e-180, Method: Compositional matrix adjust.
Identities = 302/403 (74%), Positives = 352/403 (87%), Gaps = 4/403 (0%)
Query: 49 RWFSTQA----AVEPSTSDGLTVDGIVASQWTILDESEGDWKSHAAAIAQSIQVIKKRLQ 104
RW S+ + A P T+DGLTVD I WTIL E+E DW+SHAAA+AQS++VIKKRL+
Sbjct: 60 RWLSSPSSEAVAEAPMTADGLTVDSIADKGWTILPEAESDWRSHAAAVAQSVKVIKKRLK 119
Query: 105 WKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKL 164
W + R L+ L KP+LW+DPV AGR+SRE G LMGK+K V FEQEL+EHI+M++L
Sbjct: 120 WGWILERTKQLAVVLEKPDLWEDPVFAGRVSREQGELMGKIKSVNQFEQELIEHIEMLRL 179
Query: 165 AREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWAS 224
AREEND ELE+ES++AL MRR +KEKEL+ALLSG+ D CSC+IEVQAGAGGTESMDWA+
Sbjct: 180 AREENDNELEMESMKALADMRRSAKEKELNALLSGDNDSCSCFIEVQAGAGGTESMDWAA 239
Query: 225 MVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISP 284
MV+ MY+SWAQRRGY++T+++EM GE+AGIKRATIKVDGEYAFGYAKAEVGVHRLVRISP
Sbjct: 240 MVMNMYRSWAQRRGYKITVVEEMSGEVAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISP 299
Query: 285 FDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIH 344
FDSGKRRHTSFAAVAVIP GD+++ QI +SDLRIERFRSGG GGQHANTT+SA+RI+H
Sbjct: 300 FDSGKRRHTSFAAVAVIPILGDTTSRYQIKDSDLRIERFRSGGPGGQHANTTESAIRIVH 359
Query: 345 IPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRT 404
IPTGI+AT QNERSQH NKASAM VLQSR++QLEIARQAQMNAEHTQSL +ISWGNQIR+
Sbjct: 360 IPTGISATSQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNAEHTQSLNEISWGNQIRS 419
Query: 405 YVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDK 447
YVLHPYRMVKDLRTNYEVSDPDSVLEGDLD FIL+YLS+SLD+
Sbjct: 420 YVLHPYRMVKDLRTNYEVSDPDSVLEGDLDDFILNYLSSSLDE 462
>gi|242066770|ref|XP_002454674.1| hypothetical protein SORBIDRAFT_04g035390 [Sorghum bicolor]
gi|241934505|gb|EES07650.1| hypothetical protein SORBIDRAFT_04g035390 [Sorghum bicolor]
Length = 467
Score = 634 bits (1634), Expect = e-179, Method: Compositional matrix adjust.
Identities = 303/404 (75%), Positives = 350/404 (86%), Gaps = 4/404 (0%)
Query: 48 CRWFS---TQAAVE-PSTSDGLTVDGIVASQWTILDESEGDWKSHAAAIAQSIQVIKKRL 103
RWFS T+A E P T+DGLT+D I WTIL E+E DW+SHAAA+AQS+++IKKRL
Sbjct: 59 VRWFSSPSTEAVAEAPMTADGLTIDSIADKGWTILPEAESDWRSHAAAVAQSVKLIKKRL 118
Query: 104 QWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIK 163
+W + R L+ L +P+LW+DPV AGR+SRE G LMGK+K V EQEL+EHI+M++
Sbjct: 119 KWGWILERTKQLAVVLERPDLWEDPVFAGRVSREQGELMGKIKSVNQLEQELIEHIEMLR 178
Query: 164 LAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWA 223
LAREEND ELE+ES+ AL MR +KEKEL+ALLS + D CSC+IEVQAGAGGTESMDWA
Sbjct: 179 LAREENDNELEMESMRALADMRISAKEKELNALLSRDNDSCSCFIEVQAGAGGTESMDWA 238
Query: 224 SMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRIS 283
+MV+ MYKSWAQRRGY VT+++EMPGE+AGIKRATIKVDGEYAFGYAKAEVGVHRLVRIS
Sbjct: 239 AMVMNMYKSWAQRRGYTVTVVEEMPGEVAGIKRATIKVDGEYAFGYAKAEVGVHRLVRIS 298
Query: 284 PFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRII 343
PFDSGKRRHTSFAAVAVIP GD+S+ QI +SDLRIERFRSGG GGQHANTT+SA+RI+
Sbjct: 299 PFDSGKRRHTSFAAVAVIPILGDASSRYQIKDSDLRIERFRSGGPGGQHANTTESAIRIV 358
Query: 344 HIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIR 403
HIPTGI+AT QNERSQH NKASAM VLQSR++QLEIARQAQMNAEHTQSL +ISWGNQIR
Sbjct: 359 HIPTGISATSQNERSQHMNKASAMAVLQSRLDQLEIARQAQMNAEHTQSLNEISWGNQIR 418
Query: 404 TYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDK 447
+YVLHPYRMVKDLRTNYEVSDPDSVLEGDLD FIL+YLS+SLD+
Sbjct: 419 SYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDDFILNYLSSSLDE 462
>gi|222624780|gb|EEE58912.1| hypothetical protein OsJ_10554 [Oryza sativa Japonica Group]
Length = 356
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 276/387 (71%), Positives = 313/387 (80%), Gaps = 34/387 (8%)
Query: 61 TSDGLTVDGIVASQWTILDESEGDWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELN 120
T+DGLTVD I WTIL E+E DW+SHAAA+AQS+++IKKRL+W + R LS L
Sbjct: 2 TADGLTVDSIAGKGWTILPEAESDWRSHAAAVAQSVKLIKKRLKWGWILERSRQLSVVLE 61
Query: 121 KPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEA 180
+P+LWDDPV AG++SREHG LMGK+K V FEQEL+EHIDM++LAREE+D ELE
Sbjct: 62 RPDLWDDPVFAGKVSREHGELMGKIKSVNQFEQELMEHIDMLRLAREEDDNELET----- 116
Query: 181 LLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYR 240
VQAGAGGTESMDWA+MV+ MY SWAQRRGY
Sbjct: 117 -----------------------------VQAGAGGTESMDWAAMVMNMYSSWAQRRGYT 147
Query: 241 VTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAV 300
V++++EMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAV
Sbjct: 148 VSIIEEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAV 207
Query: 301 IPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQH 360
+P GD ST QI +SDLRIERFRSGG GGQHAN T+SAVRI+HIPTGITATCQNERSQH
Sbjct: 208 VPILGDGSTRYQIKDSDLRIERFRSGGPGGQHANCTESAVRIVHIPTGITATCQNERSQH 267
Query: 361 QNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNY 420
NKASAM VLQSR++QLEIARQAQMNA+HTQSL++ISWGNQIR+YVLHPYRMVKDLRTNY
Sbjct: 268 MNKASAMAVLQSRLDQLEIARQAQMNADHTQSLSEISWGNQIRSYVLHPYRMVKDLRTNY 327
Query: 421 EVSDPDSVLEGDLDGFILSYLSASLDK 447
EVSDPDSVL GDLD FIL++LS SLD+
Sbjct: 328 EVSDPDSVLNGDLDDFILNFLSTSLDE 354
>gi|168051671|ref|XP_001778277.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670374|gb|EDQ56944.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 387
Score = 523 bits (1348), Expect = e-146, Method: Compositional matrix adjust.
Identities = 241/375 (64%), Positives = 307/375 (81%)
Query: 70 IVASQWTILDESEGDWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPV 129
++A W + ESE DW+SHAAA+A+SI +IK RL+WK L R+ L EL KPNLW++
Sbjct: 10 VIARGWQVSPESESDWRSHAAAVARSIDLIKARLEWKKLLARVQELDVELAKPNLWENAA 69
Query: 130 HAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSK 189
AG+ SRE G+L G++K V + E ELLEH+ + +LA EENDT++ + + L +R+ +
Sbjct: 70 KAGQFSRERGALSGQVKSVISMEDELLEHVGLAELAHEENDTQVVTDVTQGLAELRKTAS 129
Query: 190 EKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPG 249
E+EL ALLSGE D SC+IEVQAGAGGTESMDWA+MV++MY+ WAQ R Y VT++DEMPG
Sbjct: 130 ERELVALLSGEHDSRSCFIEVQAGAGGTESMDWAAMVMRMYRMWAQTRDYEVTVVDEMPG 189
Query: 250 EIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSST 309
E AGIKRATI+VDG YA+GYAK E GVHRLVRISPFD+GKRRHTSFAAVAVIP +S
Sbjct: 190 EEAGIKRATIRVDGLYAYGYAKTEAGVHRLVRISPFDAGKRRHTSFAAVAVIPALDESEV 249
Query: 310 HVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGV 369
++I ESDLRIERFR+GGAGGQH N T+SAVRIIHIPTGI CQ +RSQH+NKA+A+ +
Sbjct: 250 SIEIGESDLRIERFRAGGAGGQHVNKTESAVRIIHIPTGIVTQCQADRSQHRNKATALSM 309
Query: 370 LQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVL 429
LQSR++Q+E+ R+A+ NA+HTQSL+D+SWGNQIR+YVL PY+MVKDLRTNYEVSDP S+L
Sbjct: 310 LQSRLHQMEVTRRAKANAQHTQSLSDVSWGNQIRSYVLQPYQMVKDLRTNYEVSDPSSIL 369
Query: 430 EGDLDGFILSYLSAS 444
+G++DGFI++YL++S
Sbjct: 370 DGEIDGFIMAYLASS 384
>gi|302755404|ref|XP_002961126.1| hypothetical protein SELMODRAFT_75160 [Selaginella moellendorffii]
gi|300172065|gb|EFJ38665.1| hypothetical protein SELMODRAFT_75160 [Selaginella moellendorffii]
Length = 427
Score = 483 bits (1243), Expect = e-134, Method: Compositional matrix adjust.
Identities = 238/439 (54%), Positives = 312/439 (71%), Gaps = 32/439 (7%)
Query: 9 ILAPR-YCVLGENISGFGSNGLLRLKNPCGSTEVLLFP----RGCRWFSTQAAVEPSTSD 63
+LAPR +C+ F GL N C L P GC
Sbjct: 11 LLAPRLHCL-------FSRRGLHSALNLCSQKAAKLEPAREISGC--------------- 48
Query: 64 GLTVDGIVASQWTILDESEGDWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPN 123
D I A W I E E DWKSHAAA+A+S+Q++K R++W ++ +L L EL KP+
Sbjct: 49 ----DAIAARNWQI-TEDEKDWKSHAAAVARSMQLVKTRMKWGDVLSKLKDLEKELEKPD 103
Query: 124 LWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLT 183
LW D A R SRE GSL ++KE++ E EL+E++D+++LAREE D ++E E++ AL T
Sbjct: 104 LWSDTARASRYSREFGSLSSRVKEIREMESELVENVDLVELAREEKDEQVEAEAVSALAT 163
Query: 184 MRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTL 243
+R+ +K+KEL ALL E D C C++EVQAGAGG ESMD+A+M+L+MYK WA +RG+ +
Sbjct: 164 LRKAAKDKELLALLCEENDGCPCFLEVQAGAGGAESMDFAAMLLRMYKLWALQRGFEAAV 223
Query: 244 MDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPN 303
+DEMPG+ AGIKRAT++++G++A+G+AK E GVHRLVRISPFD RRHTSFAAVAVIP
Sbjct: 224 VDEMPGDRAGIKRATLRLEGDFAYGFAKTEAGVHRLVRISPFDEAGRRHTSFAAVAVIPI 283
Query: 304 SGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNK 363
++ ++INE+DL I+RFRS GAGGQH NTTDSA+RI+H PTGIT CQNERSQH+NK
Sbjct: 284 LDNAGAEIEINEADLVIDRFRSSGAGGQHVNTTDSAIRIVHKPTGITVQCQNERSQHKNK 343
Query: 364 ASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVS 423
SAM VL+SR+ QLE+ R+ + A+HTQSL +ISWGNQIR+YVL PY++VKDLRT YEV+
Sbjct: 344 DSAMEVLRSRLYQLELKRKTEETAQHTQSLHEISWGNQIRSYVLQPYQIVKDLRTGYEVT 403
Query: 424 DPDSVLEGDLDGFILSYLS 442
+P +VL+G LD FIL YLS
Sbjct: 404 NPTAVLDGGLDPFILQYLS 422
>gi|302766928|ref|XP_002966884.1| hypothetical protein SELMODRAFT_87356 [Selaginella moellendorffii]
gi|300164875|gb|EFJ31483.1| hypothetical protein SELMODRAFT_87356 [Selaginella moellendorffii]
Length = 427
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 238/438 (54%), Positives = 310/438 (70%), Gaps = 30/438 (6%)
Query: 9 ILAPRYCVLGENISGFGSNGLLRLKNPCGSTEVLLFP----RGCRWFSTQAAVEPSTSDG 64
+LAPR L F GL N C L P GC
Sbjct: 11 LLAPRLHCL------FSRRGLHSALNLCSQKAAKLEPGREISGC---------------- 48
Query: 65 LTVDGIVASQWTILDESEGDWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNL 124
D I A W I E E DWKSHAAA+A+S+Q++K R++W ++ +L L EL KP+L
Sbjct: 49 ---DAIAARNWQI-TEDEKDWKSHAAAVARSMQLVKTRMKWGDVLSKLKDLEKELEKPDL 104
Query: 125 WDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTM 184
W D A R SRE GSL ++KE++ E EL+E++D+++LAREE D ++E E++ AL T+
Sbjct: 105 WSDTARASRYSREFGSLSSRVKEIREMESELVENVDLVELAREEKDEQVEAEAVSALATL 164
Query: 185 RRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLM 244
R+ +K+KEL ALL E D C C++EVQAGAGG ESMD+A+M+L+MYK WA +RG+ ++
Sbjct: 165 RKAAKDKELLALLCEENDGCPCFLEVQAGAGGAESMDFAAMLLRMYKLWALQRGFEAAVV 224
Query: 245 DEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNS 304
DEMPG+ AGIKRAT++++G++A+G+AK E GVHRLVRISPFD RRHTSFAAVAVIP
Sbjct: 225 DEMPGDRAGIKRATLRLEGDFAYGFAKTEAGVHRLVRISPFDEAGRRHTSFAAVAVIPIL 284
Query: 305 GDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKA 364
++ ++INE+DL I+RFRS GAGGQH NTTDSA+RI+H PTGIT CQNERSQH+NK
Sbjct: 285 DNAGAEIEINEADLVIDRFRSSGAGGQHVNTTDSAIRIVHKPTGITVQCQNERSQHKNKD 344
Query: 365 SAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSD 424
SAM VL+SR+ QLE+ R+ + A+HTQSL +ISWGNQIR+YVL PY++VKDLRT YEV++
Sbjct: 345 SAMEVLRSRLYQLELKRKTEETAQHTQSLHEISWGNQIRSYVLQPYQIVKDLRTGYEVTN 404
Query: 425 PDSVLEGDLDGFILSYLS 442
P +VL+G LD FIL YLS
Sbjct: 405 PTAVLDGGLDPFILQYLS 422
>gi|254467077|ref|ZP_05080488.1| peptide chain release factor 2 [Rhodobacterales bacterium Y4I]
gi|206687985|gb|EDZ48467.1| peptide chain release factor 2 [Rhodobacterales bacterium Y4I]
Length = 375
Score = 357 bits (915), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 174/357 (48%), Positives = 250/357 (70%), Gaps = 4/357 (1%)
Query: 90 AAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVK 149
A I +S++++ +R+ W+ RL +A + PNLWDDP A ++ RE +L+ + K
Sbjct: 10 AEIEKSLELLAQRMNWETAEYRLEEFNARVEDPNLWDDPEAAQKLMRERQALVDSINTYK 69
Query: 150 AFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIE 209
+Q+L ++I++I+L E D E+ ++ E+L ++ ++ EKEL+ALL GE D ++E
Sbjct: 70 GIKQDLSDNIELIELGEMEEDAEVVKDAEESLKALKERAAEKELEALLDGEADANDTFLE 129
Query: 210 VQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGY 269
+ AGAGGTES DWASM+ +MY WA+++GY+V L E G+ AGIK A K+ G A+G+
Sbjct: 130 INAGAGGTESCDWASMLARMYVRWAEKKGYKVELQSESAGDEAGIKSAAYKISGHNAYGW 189
Query: 270 AKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAG 329
K+E GVHRLVRISP+DS +RHTSF++V V P D + +++N SD+R++ +RS GAG
Sbjct: 190 LKSESGVHRLVRISPYDSAAKRHTSFSSVWVYP-VVDDNIEIEVNPSDIRVDTYRSSGAG 248
Query: 330 GQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ-AQMNAE 388
GQH NTTDSAVRI HIPTGI T +E+SQHQN+ AM L+SR+ Q E+ R+ A++NA
Sbjct: 249 GQHVNTTDSAVRITHIPTGIVVTS-SEKSQHQNRDIAMKALKSRLYQQELDRRHAEINAA 307
Query: 389 HTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
H ++ D WGNQIR+YVL PY+MVKDLRT YE SD VL+GDLDGF+ + L+ ++
Sbjct: 308 H-EAKGDAGWGNQIRSYVLQPYQMVKDLRTQYETSDTKGVLDGDLDGFMAATLAMNV 363
>gi|254477534|ref|ZP_05090920.1| peptide chain release factor 2 [Ruegeria sp. R11]
gi|214031777|gb|EEB72612.1| peptide chain release factor 2 [Ruegeria sp. R11]
Length = 374
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 174/352 (49%), Positives = 246/352 (69%), Gaps = 4/352 (1%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
I +S++++ +RL W+ RL +A + PNLWDD A + RE L+ + K+
Sbjct: 12 IEKSLELLAQRLDWETAEFRLEEFNARVEDPNLWDDADAAQALMRERQMLVDAIDTYKSI 71
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
+QEL ++I++I+L E+D E+ ++ EAL+ ++ K+ EKEL+ALL GE D ++E+
Sbjct: 72 KQELADNIELIELGEMEDDNEVVKDAEEALVALKEKAAEKELEALLDGEADSNDTFLEIN 131
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AGAGGTES DWASM+ +MY WA+++GY+V L E G+ AGIK A K+ G A+G+ K
Sbjct: 132 AGAGGTESCDWASMLARMYVRWAEKKGYKVELQSESAGDEAGIKSAAYKISGHNAYGWLK 191
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
+E GVHRLVRISP+DS +RHTSF++V V P D + + +N +D+R++ +RS GAGGQ
Sbjct: 192 SESGVHRLVRISPYDSAAKRHTSFSSVWVYP-VVDDNIEIDVNPADIRVDTYRSSGAGGQ 250
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ-AQMNAEHT 390
H NTTDSAVRI HIPTGI T +E+SQHQN+ AM L+SR+ Q E+ R+ A +NA H
Sbjct: 251 HVNTTDSAVRITHIPTGIVVTS-SEKSQHQNRDIAMKALKSRLYQQELDRRNADINAAH- 308
Query: 391 QSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
++ D WGNQIR+YVL PY+MVKDLRT++E SD VL+GDLDGF+ + L+
Sbjct: 309 EAKGDAGWGNQIRSYVLQPYQMVKDLRTSHETSDTKGVLDGDLDGFMAATLA 360
>gi|260433401|ref|ZP_05787372.1| peptide chain release factor 2 [Silicibacter lacuscaerulensis
ITI-1157]
gi|260417229|gb|EEX10488.1| peptide chain release factor 2 [Silicibacter lacuscaerulensis
ITI-1157]
Length = 375
Score = 350 bits (899), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 172/357 (48%), Positives = 252/357 (70%), Gaps = 4/357 (1%)
Query: 90 AAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVK 149
A I +S++++ +R+ ++ RL +A + PNLWD+P +A ++ RE L+ ++ +
Sbjct: 10 AEIQKSLELLAQRMDYETAAHRLEEFNARVEDPNLWDNPENAQKLMRERQVLVDAIETYE 69
Query: 150 AFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIE 209
+ + +L +++++I+L E D E+ ++ EAL +R K+ EKEL+ALL GE D ++E
Sbjct: 70 SIKTDLKDNVELIELGEMEGDEEVVKDAEEALKKLRDKAAEKELEALLDGEADANDTFLE 129
Query: 210 VQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGY 269
+ AGAGGTES DWASM+ +MY WA+++GY+V L E PGE AGIK A K+ G A+G+
Sbjct: 130 INAGAGGTESCDWASMLARMYVRWAEKKGYKVELQSETPGEEAGIKSAAYKISGHNAYGW 189
Query: 270 AKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAG 329
K+E GVHRLVRISP+DS +RHTSF++V V P D + +++N +D+R++ +RS GAG
Sbjct: 190 LKSESGVHRLVRISPYDSAAKRHTSFSSVWVYP-VVDDNIEIEVNPADIRVDTYRSSGAG 248
Query: 330 GQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ-AQMNAE 388
GQH NTTDSAVRI HIPTGI T +E+SQHQN+ AM L+SR+ Q+E+ R+ A++NA
Sbjct: 249 GQHVNTTDSAVRITHIPTGIVVTS-SEKSQHQNRDIAMKALKSRLYQMELDRRNAEINAA 307
Query: 389 HTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
H ++ D WGNQIR+YVL PY+MVKDLRT YE SD VL+GDL GF+ + L+ ++
Sbjct: 308 H-EAKGDAGWGNQIRSYVLQPYQMVKDLRTGYETSDTKGVLDGDLGGFMAATLAMNV 363
>gi|126739118|ref|ZP_01754812.1| peptide chain release factor 2 [Roseobacter sp. SK209-2-6]
gi|126719735|gb|EBA16443.1| peptide chain release factor 2 [Roseobacter sp. SK209-2-6]
Length = 374
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 174/353 (49%), Positives = 246/353 (69%), Gaps = 2/353 (0%)
Query: 90 AAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVK 149
A I +S++++ +RL W+ RL +A + PNLWDDP A ++ RE +L+ M K
Sbjct: 10 AEIEKSLELLAQRLNWETAEYRLEEFNARVEDPNLWDDPEAAQKLMRERQTLVDAMDTYK 69
Query: 150 AFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIE 209
+Q+L ++I++I+L E D E+ ++ EAL +++K+ EKEL+ALL GE D ++E
Sbjct: 70 GIKQDLADNIELIELGEMEEDEEVVADAEEALKALQQKAAEKELEALLDGEADSNDTFLE 129
Query: 210 VQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGY 269
+ +GAGGTES DWASM+ +MY WA+++GY+V L E GE AGIK A K+ G A+G+
Sbjct: 130 INSGAGGTESCDWASMLARMYVRWAEKKGYKVELQSETAGEEAGIKSAAYKISGHNAYGW 189
Query: 270 AKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAG 329
K+E GVHRLVRISPFDS +RHTSF +V V P D + +++N +D+RI+ +RS GAG
Sbjct: 190 LKSESGVHRLVRISPFDSAAKRHTSFTSVKVYP-VVDDNIEIEVNPADIRIDTYRSSGAG 248
Query: 330 GQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEH 389
GQH NTTDSAVRI H PTGI T +E+SQHQN+ AM L+SR+ Q+E+ +++ + E
Sbjct: 249 GQHVNTTDSAVRITHNPTGIVVTS-SEKSQHQNRDIAMKALKSRLYQIELDKRSALVNEV 307
Query: 390 TQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
+S D WGNQIR+YVL PY+MVKDLRT++E SD VL+GDLDGF+ + L+
Sbjct: 308 HESAGDAGWGNQIRSYVLQPYQMVKDLRTSHETSDTKGVLDGDLDGFMAATLA 360
>gi|407786115|ref|ZP_11133261.1| peptide chain release factor 2 [Celeribacter baekdonensis B30]
gi|407201847|gb|EKE71843.1| peptide chain release factor 2 [Celeribacter baekdonensis B30]
Length = 374
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 173/353 (49%), Positives = 243/353 (68%), Gaps = 2/353 (0%)
Query: 90 AAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVK 149
A I +S+ ++K+RL W+ RL +A + P LWDDP A ++ RE LM + K
Sbjct: 10 AKIEKSVALLKQRLDWETAPHRLEEFNAMIEDPTLWDDPERAQKLMRERQMLMDAVNTAK 69
Query: 150 AFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIE 209
+ EQ++ ++I++I++ E D E+ E+ AL+ + + + EKEL+ALL GE D ++E
Sbjct: 70 SIEQDMKDNIELIEMGEMEEDQEVIAEAEAALMALTKTAAEKELEALLDGEADGNDTFLE 129
Query: 210 VQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGY 269
+ +GAGGTES DWASM+ +MY WA+++GY+V L E GE AGIK A K+ G A+G+
Sbjct: 130 INSGAGGTESCDWASMLARMYVRWAEKKGYKVELQSESAGEEAGIKSAAYKISGPNAYGW 189
Query: 270 AKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAG 329
K+E GVHRLVRISPFDS +RHTSF +V V P D + +++N SD+RI+ +RS GAG
Sbjct: 190 LKSESGVHRLVRISPFDSAAKRHTSFTSVKVYP-VVDDNIEIEVNPSDIRIDTYRSSGAG 248
Query: 330 GQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEH 389
GQH NTTDSAVRI H PTGI T +E+SQHQN+ AM L+SR+ Q+E+ +++ + E
Sbjct: 249 GQHVNTTDSAVRITHFPTGIVVTS-SEKSQHQNRDIAMKALKSRLYQMELDKRSALVNEA 307
Query: 390 TQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
++ D WGNQIR+YVL PY+MVKDLRTN+E SD VL+GDLDGF+ + L+
Sbjct: 308 HENAGDAGWGNQIRSYVLQPYQMVKDLRTNFETSDTKGVLDGDLDGFMAATLA 360
>gi|83951928|ref|ZP_00960660.1| peptide chain release factor 2 [Roseovarius nubinhibens ISM]
gi|83836934|gb|EAP76231.1| peptide chain release factor 2 [Roseovarius nubinhibens ISM]
Length = 375
Score = 348 bits (893), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 175/355 (49%), Positives = 244/355 (68%), Gaps = 4/355 (1%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
I +S++++++R+ W RL +A + PNLWDDP A ++ RE SL+ + A
Sbjct: 12 IEKSLELLRQRMDWDTAKHRLEEFNARVEDPNLWDDPAKAQKLMRERQSLVDAIDTHDAI 71
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
QE+ ++I++I+L E D E+ E+ AL +++ K+ KEL+ALL+GE D ++E+
Sbjct: 72 NQEMSDNIELIELGEMEGDNEVIGEAESALKSLKEKAGAKELEALLNGEADANDTFLEIN 131
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AGAGGTES DWASM+ +MY WA++RGY V L E GE AGIK A K+ G A+G+ K
Sbjct: 132 AGAGGTESCDWASMLARMYVRWAEKRGYTVELQSESAGEEAGIKSAAYKISGHNAYGWLK 191
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
+E GVHRLVRISP+DS +RHTSF++V V P D +++N +D+RI+ +RS GAGGQ
Sbjct: 192 SESGVHRLVRISPYDSAAKRHTSFSSVWVYPVV-DDDIEIEVNPADIRIDTYRSSGAGGQ 250
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ-AQMNAEHT 390
H NTTDSAVRI H PTGI T +E+SQHQN+ AM L+SR+ Q+E+ R+ A +NA H
Sbjct: 251 HVNTTDSAVRITHHPTGIVVTS-SEKSQHQNRDIAMKALKSRLYQMELDRRTADINAAH- 308
Query: 391 QSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
++ D WGNQIR+YVL PY+MVKDLRTN E SD VL+GDLD F+ + L+ ++
Sbjct: 309 EAKGDAGWGNQIRSYVLQPYQMVKDLRTNVETSDTKGVLDGDLDQFMAATLAMNV 363
>gi|399993195|ref|YP_006573435.1| peptide chain release factor 2 [Phaeobacter gallaeciensis DSM 17395
= CIP 105210]
gi|400754789|ref|YP_006563157.1| peptide chain release factor 2 [Phaeobacter gallaeciensis 2.10]
gi|398653942|gb|AFO87912.1| peptide chain release factor 2 [Phaeobacter gallaeciensis 2.10]
gi|398657750|gb|AFO91716.1| peptide chain release factor 2 [Phaeobacter gallaeciensis DSM 17395
= CIP 105210]
Length = 374
Score = 348 bits (892), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 175/354 (49%), Positives = 245/354 (69%), Gaps = 4/354 (1%)
Query: 90 AAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVK 149
A I +S++++ +RL W+ RL +A + PNLWDD A + R+ L+ + K
Sbjct: 10 ADIEKSLELLAQRLDWETAEFRLEEFNARVEDPNLWDDADAAQALMRDRQMLVDAIDTYK 69
Query: 150 AFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIE 209
+ +Q+L +++++I+L E D E+ ++ AL T++ K+ EKEL+ALL GE D ++E
Sbjct: 70 SIKQDLSDNMELIELGEMEEDAEVISDAEAALKTLKEKAAEKELEALLDGEADSNDTFLE 129
Query: 210 VQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGY 269
+ AGAGGTES DWASM+ +MY WA+++GY+V L E GE AGIK A K+ G A+G+
Sbjct: 130 INAGAGGTESCDWASMLARMYVRWAEKKGYKVELQSESAGEEAGIKSAAYKISGHNAYGW 189
Query: 270 AKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAG 329
K+E GVHRLVRISP+DS +RHTSF++V V P D + + +N SD+RI+ +RS GAG
Sbjct: 190 LKSESGVHRLVRISPYDSAAKRHTSFSSVWVYP-VVDDNIEIDVNPSDIRIDTYRSSGAG 248
Query: 330 GQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ-AQMNAE 388
GQH NTTDSAVRI H PTGI T +E+SQHQN+ AM L+SR+ QLE+ R+ A +NA
Sbjct: 249 GQHVNTTDSAVRITHEPTGIVVTS-SEKSQHQNRDIAMKALKSRLYQLELDRRNADINAA 307
Query: 389 HTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
H ++ D WGNQIR+YVL PY+MVKDLRT++E SD VL+GDLDGF+ + L+
Sbjct: 308 H-EAKGDAGWGNQIRSYVLQPYQMVKDLRTSHETSDTKGVLDGDLDGFMAATLA 360
>gi|332185456|ref|ZP_08387204.1| peptide chain release factor 2 [Sphingomonas sp. S17]
gi|332014434|gb|EGI56491.1| peptide chain release factor 2 [Sphingomonas sp. S17]
Length = 375
Score = 347 bits (891), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 178/358 (49%), Positives = 244/358 (68%), Gaps = 3/358 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
++H I ++ ++++ L W RL+ L+A + LW+DP A + RE L +
Sbjct: 6 QAHVDTINDALALLRRFLDWDRALRRLDELNARVEDQALWNDPKQAQAVMRERRRLDEAI 65
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
+A E EL +++I+LA E D ELE E++ +L + ++++ ++ ALL+GE D
Sbjct: 66 TATRAIENELSGTVELIELAEMEGDEELEKEAVTSLGDLAKRAEADKVKALLAGEADAND 125
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
YIE+ AGAGGTES DWA M+ +MY WA+RRG +V L+D GE AGIK AT+ V GE
Sbjct: 126 SYIEINAGAGGTESQDWAGMLQRMYTRWAERRGMKVELIDYHAGEQAGIKSATLLVKGEN 185
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
A+GYAK E GVHRLVRISP+DS RRHTSF++V V P D + V+INES+LRI+ +R+
Sbjct: 186 AYGYAKVESGVHRLVRISPYDSAARRHTSFSSVWVYP-VIDDNIEVEINESELRIDTYRA 244
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIA-RQAQ 384
GAGGQH NTTDSAVRI H+PTGI CQN+RSQH+NKA A L++R+ + E+A R+A
Sbjct: 245 SGAGGQHINTTDSAVRITHLPTGIVVQCQNQRSQHKNKAEAYNQLRARLYERELAEREAV 304
Query: 385 MNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
NAE+ + TDI WG+QIR+YVL PY++VKDLRT + P VL+GDLD F+ + LS
Sbjct: 305 ANAENA-TKTDIGWGHQIRSYVLQPYQLVKDLRTGVTSTAPGDVLDGDLDAFMAAALS 361
>gi|144897340|emb|CAM74204.1| peptide chain release factor 2 [Magnetospirillum gryphiswaldense
MSR-1]
Length = 372
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 173/364 (47%), Positives = 245/364 (67%), Gaps = 2/364 (0%)
Query: 89 AAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEV 148
AA I +S+ ++K+ L W + +RL+ L+A+ PNLW+D A ++ RE L ++
Sbjct: 9 AADIRKSVALLKRHLNWDDALMRLDELNAQAEDPNLWNDGDKAQKLMRERTQLDTQVSGC 68
Query: 149 KAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYI 208
+ E +L + + +I+LA E DT++ ++ L ++ + + EL+ LLSGE D CY+
Sbjct: 69 RKLEADLDDMLGLIELADAEGDTDVAADAEAQLRALKDLAGKLELETLLSGEADANDCYL 128
Query: 209 EVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFG 268
E+ +GAGGTE+ DWA M+L+MY WA++ GY++ ++E GE AGIK ATI+V G A+G
Sbjct: 129 EINSGAGGTEAQDWAEMLLRMYSRWAEQHGYKLEFVEESAGEGAGIKSATIRVVGHNAYG 188
Query: 269 YAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGA 328
+ K E GVHRLVRISPFDS RR TSFA+ V P D + +QINESD RI+ +R+ GA
Sbjct: 189 WLKTEAGVHRLVRISPFDSNARRQTSFASAWVYPVV-DDTIDIQINESDCRIDTYRASGA 247
Query: 329 GGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAE 388
GGQH N TDSAVRI HIPTGI CQ ERSQHQN+A A +L++R+ + E+ ++
Sbjct: 248 GGQHINKTDSAVRITHIPTGIAVACQTERSQHQNRARAWDMLRARLYEAELQKREAAAQA 307
Query: 389 HTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLD-K 447
+ TDI WG+QIR+YVL PY+M+KDLRTN E SD +VL+GDLD F+ + L++ + K
Sbjct: 308 LEDTKTDIGWGHQIRSYVLQPYQMIKDLRTNVETSDTQAVLDGDLDMFMAASLASRIKGK 367
Query: 448 DEGG 451
DEG
Sbjct: 368 DEGA 371
>gi|452963516|gb|EME68582.1| peptide chain release factor 2 [Magnetospirillum sp. SO-1]
Length = 371
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 175/361 (48%), Positives = 244/361 (67%), Gaps = 3/361 (0%)
Query: 89 AAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEV 148
A I +S ++K+ L W +RL+ L+A P+LW+D A +I RE L ++
Sbjct: 9 AQDIRRSAALLKRHLNWDEALMRLDELNASAENPDLWNDAASAQKIMRERNELDSAIQGC 68
Query: 149 KAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYI 208
+A E+EL + +++I+L E D + ++ E + T++ ++ + EL+ LLSGE D CY+
Sbjct: 69 RALERELADLLELIELGEMEGDQTVVDDAEEQVRTLKERAGKMELETLLSGEADHNDCYL 128
Query: 209 EVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFG 268
E+ AGAGGTES DWA M+L+MY WA++ GY+V ++E GE AGIK AT+++ G A+G
Sbjct: 129 EINAGAGGTESQDWAEMLLRMYTRWAEKHGYKVEWLEESSGEQAGIKSATVRILGHNAYG 188
Query: 269 YAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGA 328
+ K E GVHRLVRISP+DS RRHTSF++ V P D + +QINES+ RI+ +R+ GA
Sbjct: 189 WLKTESGVHRLVRISPYDSAARRHTSFSSAWVYPVI-DDTIDIQINESECRIDTYRASGA 247
Query: 329 GGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI-ARQAQMNA 387
GGQH N TDSAVRI HIPTGI CQ ERSQHQN+A A +L++R+ + E+ R+A A
Sbjct: 248 GGQHINKTDSAVRITHIPTGIAVACQMERSQHQNRARAWDMLRARLYEAELQKREAAAQA 307
Query: 388 EHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDK 447
Q TDI WG+QIR+YVL PY+MVKDLRTN E SD VL+GDLD F+ + L+A ++
Sbjct: 308 LEDQK-TDIGWGHQIRSYVLQPYQMVKDLRTNVETSDTQGVLDGDLDQFMAASLAARVEG 366
Query: 448 D 448
D
Sbjct: 367 D 367
>gi|163747048|ref|ZP_02154404.1| peptide chain release factor 2 [Oceanibulbus indolifex HEL-45]
gi|161379609|gb|EDQ04022.1| peptide chain release factor 2 [Oceanibulbus indolifex HEL-45]
Length = 374
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 171/357 (47%), Positives = 246/357 (68%), Gaps = 2/357 (0%)
Query: 89 AAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEV 148
A I++S++++ +RL RL +A + PNLWD+P A ++ RE SL+ +
Sbjct: 9 ADQISKSLELLAQRLDVDTAPYRLEEFNARVEDPNLWDNPDAAQKLMRERQSLVDAIDTY 68
Query: 149 KAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYI 208
+ +QEL +++++I+L E D E+ E+ AL ++ + +KEL+ALL+GE D ++
Sbjct: 69 EGIKQELADNVELIELGEMEGDEEVIKEAEVALKSLAATAAQKELEALLNGEADSNDTFL 128
Query: 209 EVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFG 268
E+ +GAGGTES DWASM+ +MY WA+++GY+V L E GE AGIK AT K++G A+G
Sbjct: 129 EINSGAGGTESCDWASMLARMYVRWAEKKGYKVDLQAESAGEEAGIKSATYKIEGHNAYG 188
Query: 269 YAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGA 328
+ K+E GVHRLVRISPFDS +RHTSF +V V P D + +++N SD+RI+ +RS GA
Sbjct: 189 WLKSESGVHRLVRISPFDSAAKRHTSFTSVKVYPVV-DDNIEIEVNPSDIRIDTYRSSGA 247
Query: 329 GGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAE 388
GGQH NTTDSAVRI H PTGI T +E+SQHQN+ AM L+SR+ Q+E+ +++ + E
Sbjct: 248 GGQHVNTTDSAVRITHHPTGIVVTS-SEKSQHQNRDIAMKALKSRLYQMELDKRSALVNE 306
Query: 389 HTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
++ D WGNQIR+YVL PY+MVKDLRTNYE SD VL+GDLDG + + L+ ++
Sbjct: 307 AHENAGDAGWGNQIRSYVLQPYQMVKDLRTNYETSDTKGVLDGDLDGLMGATLALAV 363
>gi|340027344|ref|ZP_08663407.1| peptide chain release factor 2 [Paracoccus sp. TRP]
Length = 375
Score = 345 bits (884), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 171/353 (48%), Positives = 248/353 (70%), Gaps = 4/353 (1%)
Query: 91 AIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKA 150
AI +S++++ +R+ W+ RL L+A + ++W DP A ++ R+ L ++ +
Sbjct: 11 AIRKSLKLLGQRMDWETAPHRLEELNAMIEAGDIWSDPARAQKLMRDRQMLSDAVETYRR 70
Query: 151 FEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEV 210
E EL ++I++I+L E DTE+ ++ AL + +++KEL+ALL+GE D ++E+
Sbjct: 71 IETELKDNIELIELGEAEGDTEVVTDAETALKELVELAQQKELEALLNGEADGNDTFLEI 130
Query: 211 QAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYA 270
AGAGGTES DWASM+ +MY WA+++GY V L+ E PGE AGI+ A K+ G A+G+
Sbjct: 131 NAGAGGTESADWASMLARMYVRWAEKKGYNVELLSETPGEEAGIRSAAYKISGPNAYGWL 190
Query: 271 KAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGG 330
K+E GVHRLVRISP+DS RRHTSF++V V P D + + I ++++RI+ +RS GAGG
Sbjct: 191 KSESGVHRLVRISPYDSAARRHTSFSSVWVYPVV-DDNIEIVIPDNEIRIDTYRSSGAGG 249
Query: 331 QHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI-ARQAQMNAEH 389
QH NTTDSAVRI H+PTGI T +E+SQHQN+A+AM L++R+ QLE+ R A +NA+H
Sbjct: 250 QHVNTTDSAVRITHLPTGIVVTS-SEKSQHQNRANAMAALKARLYQLELDKRNAAINAQH 308
Query: 390 TQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
++ D WGNQIR+YVLHPY+MVKDLRT+YE SD VL+GDLD F+ + L+
Sbjct: 309 -EAKGDAGWGNQIRSYVLHPYQMVKDLRTSYETSDTQGVLDGDLDAFMAATLA 360
>gi|83942252|ref|ZP_00954713.1| peptide chain release factor 2 [Sulfitobacter sp. EE-36]
gi|83846345|gb|EAP84221.1| peptide chain release factor 2 [Sulfitobacter sp. EE-36]
Length = 374
Score = 344 bits (883), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 175/364 (48%), Positives = 249/364 (68%), Gaps = 4/364 (1%)
Query: 83 GDWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLM 142
D ++ A I++S++++ +RL + RL +A + PNLWDDP A ++ R+ +L+
Sbjct: 3 ADAQNTADKISKSLELLAQRLDVETAPYRLEEFNARVEDPNLWDDPDAAQKLMRDRQALV 62
Query: 143 GKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELD 202
+ + +QEL ++I++I+L E D E+ E+ AL + + +KEL+ALL+GE D
Sbjct: 63 DSIATYEGIKQELADNIELIELGEMEGDDEVIAEAETALKKLAETAAQKELEALLNGEAD 122
Query: 203 PCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVD 262
++E+ AGAGGTES DWA+++ +MY WA+++GY+V L E PGE AGIK AT K+
Sbjct: 123 GNDTFLEINAGAGGTESCDWANILSRMYVRWAEKKGYKVELQSESPGEEAGIKSATYKIS 182
Query: 263 GEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIER 322
G A+G+ K+E GVHRLVRISPFDS +RHTSF ++ V P D + + IN SD+RI+
Sbjct: 183 GPNAYGWLKSESGVHRLVRISPFDSAAKRHTSFTSIWVYPVV-DDNIEIDINPSDIRIDT 241
Query: 323 FRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ 382
+RS GAGGQH NTTDSAVRI H PTGI T +E+SQHQN+ AM L+SR+ Q+E+ R+
Sbjct: 242 YRSSGAGGQHVNTTDSAVRITHHPTGIVVTS-SEKSQHQNRDIAMKALKSRLYQMELDRR 300
Query: 383 -AQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
A +N H ++ D WGNQIR+YVL PY+MVKDLRTNYE SD VL+GDLDG + + L
Sbjct: 301 NAAINEAH-ENKGDAGWGNQIRSYVLQPYQMVKDLRTNYETSDTKGVLDGDLDGLMGAAL 359
Query: 442 SASL 445
+ ++
Sbjct: 360 ALAV 363
>gi|354594597|ref|ZP_09012636.1| peptide chain release factor 2 [Commensalibacter intestini A911]
gi|353672273|gb|EHD13973.1| peptide chain release factor 2 [Commensalibacter intestini A911]
Length = 348
Score = 344 bits (882), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 163/332 (49%), Positives = 237/332 (71%), Gaps = 1/332 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL L+ ++ PNLWDD +A +I +E L ++ V+ EQE ++++MI+LA E D
Sbjct: 3 RLAELNHQIEDPNLWDDAENAQKIMQERTYLANQVDFVRRLEQECNDNLEMIELAELEGD 62
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
+ ++L L + ++ K E+++LLSGE D CY+EV +GAGGTE+ DWA M+L+MY
Sbjct: 63 QAIIDDALSNLKALEKEVKRLEIESLLSGEADRNDCYLEVNSGAGGTEAQDWAQMLLRMY 122
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA++RGY+V+ M+ G+ AGIK AT+++ G A+G+ K E GVHRLVRISPFDS KR
Sbjct: 123 TRWAEQRGYKVSFMESTEGDTAGIKSATLQISGINAYGWLKTEAGVHRLVRISPFDSAKR 182
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSFA+V V P D S + INESDL+++ +R+ GAGGQH N T+SA+RI H+PTGI
Sbjct: 183 RHTSFASVWVYP-VIDDSIQIDINESDLKVDTYRASGAGGQHINKTESAIRITHVPTGIV 241
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+N+A+AM +L++R+ + E+ ++ + A+ TDI WG+QIR+YVL PY
Sbjct: 242 VACQNDRSQHRNRATAMEMLKARLYEAELKKREEAAAQTEAGKTDIGWGHQIRSYVLAPY 301
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
++VKDLRT E ++P +VL+GDLD F+ + L+
Sbjct: 302 QLVKDLRTEVERTNPQAVLDGDLDEFMAASLA 333
>gi|254454841|ref|ZP_05068278.1| peptide chain release factor 2 [Octadecabacter arcticus 238]
gi|198269247|gb|EDY93517.1| peptide chain release factor 2 [Octadecabacter arcticus 238]
Length = 375
Score = 343 bits (881), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 166/354 (46%), Positives = 241/354 (68%), Gaps = 2/354 (0%)
Query: 89 AAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEV 148
A I +S+ ++ +R++W + RL +A + P LWDDP A ++ R+ SL+ +
Sbjct: 9 AGEIEKSLSLLAQRMEWDTASHRLEEFNARVEDPTLWDDPDAAQKLMRDRQSLVDAIASY 68
Query: 149 KAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYI 208
+A QEL +H+++I++ E+D + E+ + L + K+ EKEL+ALL+GE D ++
Sbjct: 69 EAIRQELSDHVELIEMGEMEDDAGVVTEAEDGLKVLAAKAAEKELEALLNGEADANDTFL 128
Query: 209 EVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFG 268
E+ +GAGGTE+ DWA+M+ +MY WA+R+GY+V L E GE GIK A+ K+ G A+G
Sbjct: 129 EINSGAGGTEACDWAAMLARMYVRWAERKGYKVELQSESAGEEVGIKSASYKISGHNAYG 188
Query: 269 YAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGA 328
+ K+E GVHRLVRISPFDS +RHTSF +V V P D + +++N SD+RI+ +RS GA
Sbjct: 189 WLKSESGVHRLVRISPFDSAAKRHTSFTSVKVYPVV-DDNIEIEVNPSDIRIDTYRSSGA 247
Query: 329 GGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAE 388
GGQH NTTDSAVRI H PTGI T +E+SQHQN+ AM L+SR+ Q+E+ +++ + E
Sbjct: 248 GGQHVNTTDSAVRITHAPTGIVVTS-SEKSQHQNRDIAMKALKSRLYQIEMDKRSALVNE 306
Query: 389 HTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
++ D WGNQIR+YVL PY+MVKDLRT +E SD VL+GDLD F+ + L+
Sbjct: 307 VHENAGDAGWGNQIRSYVLQPYQMVKDLRTRHETSDTQGVLDGDLDAFMGATLA 360
>gi|86136665|ref|ZP_01055244.1| peptide chain release factor 2 [Roseobacter sp. MED193]
gi|85827539|gb|EAQ47735.1| peptide chain release factor 2 [Roseobacter sp. MED193]
Length = 374
Score = 343 bits (880), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 172/354 (48%), Positives = 243/354 (68%), Gaps = 4/354 (1%)
Query: 90 AAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVK 149
A I +S++++ +RL W+ RL +A + PNLWDD A ++ RE +L+ + K
Sbjct: 10 AEIEKSLELLAQRLNWETAEYRLEEFNARVEDPNLWDDAEAAQKLMRERQNLVDAIDTYK 69
Query: 150 AFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIE 209
+Q+L ++I++I+L E D E+ ++ EAL ++ + EKEL+ALL GE D ++E
Sbjct: 70 GIKQDLADNIELIELGEMEEDQEVITDAEEALKALKVSAAEKELEALLDGEADSNDTFLE 129
Query: 210 VQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGY 269
+ +GAGGTES DWASM+ +MY WA+++GY+V L E GE AGIK A K+ G A+G+
Sbjct: 130 INSGAGGTESCDWASMLARMYVRWAEKKGYKVELQSESAGEEAGIKSAAYKISGHNAYGW 189
Query: 270 AKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAG 329
K+E GVHRLVRISPFDS +RHTSF +V V P D + + +N +D+RI+ +RS GAG
Sbjct: 190 LKSESGVHRLVRISPFDSAAKRHTSFCSVWVYP-VVDDNIEIDVNPADIRIDTYRSSGAG 248
Query: 330 GQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ-AQMNAE 388
GQH NTTDSAVRI H PTGI T +E+SQHQN+ AM L+SR+ Q+E+ R+ A +N
Sbjct: 249 GQHVNTTDSAVRITHHPTGIVVTS-SEKSQHQNRDIAMKALKSRLYQMELDRRNAAINEA 307
Query: 389 HTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
H ++ D WG+QIR+YVL PY+MVKDLRT++E SD VL+GDLDGF+ + L+
Sbjct: 308 H-ENKGDAGWGSQIRSYVLQPYQMVKDLRTSHETSDTKGVLDGDLDGFMAATLA 360
>gi|424910200|ref|ZP_18333577.1| peptide chain release factor 2 [Rhizobium leguminosarum bv. viciae
USDA 2370]
gi|392846231|gb|EJA98753.1| peptide chain release factor 2 [Rhizobium leguminosarum bv. viciae
USDA 2370]
Length = 376
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 169/351 (48%), Positives = 240/351 (68%), Gaps = 1/351 (0%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
I Q+I ++++ L W RL+ L+ + P LW+D A ++ RE L + VKA
Sbjct: 12 IKQAISLLRRHLDWDQAIRRLDWLNNKAEDPTLWNDAAEAQKLMRERQQLDDSINGVKAL 71
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
EQ+L ++I++I+L E D E+ ++ +AL ++ ++ ++++A+LSGE D Y+EV
Sbjct: 72 EQQLRDNIELIELGEMEGDDEIVKDAEDALKALKSEANRRQVEAMLSGEADGNDTYLEVH 131
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
+GAGGTES DWA+M+L+MY WA R G++V +++ GE AGIK ATI V G AFG+ K
Sbjct: 132 SGAGGTESQDWANMLLRMYTRWADREGFKVEVLEVHDGEEAGIKSATILVKGHNAFGWLK 191
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
E GVHRLVRISP+DS RRHTSF++V V P D S + INESD RI+ +RS GAGGQ
Sbjct: 192 TESGVHRLVRISPYDSNARRHTSFSSVWVYP-VVDDSIQIDINESDCRIDTYRSSGAGGQ 250
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQ 391
H NTTDSAVRI HIPTGI CQ ERSQH+N+A A +L++R+ ++E+ ++ +
Sbjct: 251 HVNTTDSAVRITHIPTGIAVACQQERSQHKNRAKAWDMLRARLYEVELQKREEAANAQAA 310
Query: 392 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
S TDI WG+QIR+YVL PY++VKDLRT E + P +VL+GDL+ F+ + L+
Sbjct: 311 SKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTAPGNVLDGDLNEFMEAALA 361
>gi|46201582|ref|ZP_00208157.1| COG1186: Protein chain release factor B [Magnetospirillum
magnetotacticum MS-1]
Length = 371
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 177/361 (49%), Positives = 242/361 (67%), Gaps = 3/361 (0%)
Query: 89 AAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEV 148
A I +S ++K+ L W +RL+ L+A P+LW+D A +I RE L ++
Sbjct: 9 AQDIRRSAALLKRHLNWDEALMRLDELNASAENPDLWNDAGAAQKIMRERNDLDSAIQGC 68
Query: 149 KAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYI 208
+A E+EL + I++I+L E D + ++ E + ++ ++ + EL+ LLSGE D CY+
Sbjct: 69 RALERELADLIELIELGEMEGDQTVIDDAEEQIRAVKERAAKMELETLLSGEADHNDCYM 128
Query: 209 EVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFG 268
E+ AGAGGTES DWA M+L+MY WA++ GY+V ++E GE AGIK ATI++ G A+G
Sbjct: 129 EINAGAGGTESQDWAEMLLRMYTRWAEKHGYKVEWLEESSGEQAGIKSATIRILGHNAYG 188
Query: 269 YAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGA 328
+ K E GVHRLVRISP+DS RRHTSF++ V P D S +QINES+ RI+ +R+ GA
Sbjct: 189 WLKTESGVHRLVRISPYDSAARRHTSFSSAWVYPVI-DDSIDIQINESECRIDTYRASGA 247
Query: 329 GGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI-ARQAQMNA 387
GGQH N TDSAVRI HIPTGI CQ ERSQHQN+A A +L++R+ + E+ R+A A
Sbjct: 248 GGQHINKTDSAVRITHIPTGIAVACQMERSQHQNRARAWDMLRARLYEAELQKREAAAQA 307
Query: 388 EHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDK 447
Q TDI WG+QIR+YVL PY+MVKDLRTN E SD VL+GDLD F+ + L+A +
Sbjct: 308 LEDQK-TDIGWGHQIRSYVLQPYQMVKDLRTNVETSDTQGVLDGDLDMFMAASLAARVQG 366
Query: 448 D 448
D
Sbjct: 367 D 367
>gi|255264706|ref|ZP_05344048.1| peptide chain release factor 2 [Thalassiobium sp. R2A62]
gi|255107041|gb|EET49715.1| peptide chain release factor 2 [Thalassiobium sp. R2A62]
Length = 375
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 165/354 (46%), Positives = 243/354 (68%), Gaps = 2/354 (0%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
I +S+ ++ +RL ++ RL +A + P LWDDP A ++ R+ +L+ +K +
Sbjct: 12 IEKSLVLLAQRLDYETAPYRLEEFNARVEDPTLWDDPEAAQKLMRDRQALVDAIKTYETI 71
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
QEL +++++I+L E+D ++ E+ AL T++ + +KEL+ALL GE D ++E+
Sbjct: 72 SQELADNVELIELGEMEDDADVVTEAETALATLKDAAAQKELEALLDGEADANDTFLEIN 131
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AGAGGTES DWASM+ +MY WA++ GY+V L E G+ AGIK A+ K+ G A+G+ K
Sbjct: 132 AGAGGTESCDWASMLARMYVRWAEKAGYKVELQSESAGDEAGIKSASYKISGHNAYGWLK 191
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
+E GVHRLVRISPFDS +RHTSF +V V P D + +++N +D+RI+ +RS GAGGQ
Sbjct: 192 SESGVHRLVRISPFDSAAKRHTSFTSVKVYPVV-DDNIEIEVNPADIRIDTYRSSGAGGQ 250
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQ 391
H NTTDSAVRI H PTGI T +E+SQHQN+ AM L+SR+ Q+E+ +++ + E +
Sbjct: 251 HVNTTDSAVRITHAPTGIVVTS-SEKSQHQNRDIAMKALKSRLYQIELDKRSALVNEAHE 309
Query: 392 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ D WGNQIR+YVL PY+MVKDLRT++E SD VL+GDLDG + + L+ ++
Sbjct: 310 NAGDAGWGNQIRSYVLQPYQMVKDLRTSFETSDTKGVLDGDLDGLMAATLAQNV 363
>gi|83955487|ref|ZP_00964118.1| peptide chain release factor 2 [Sulfitobacter sp. NAS-14.1]
gi|83840131|gb|EAP79306.1| peptide chain release factor 2 [Sulfitobacter sp. NAS-14.1]
Length = 374
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 174/364 (47%), Positives = 249/364 (68%), Gaps = 4/364 (1%)
Query: 83 GDWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLM 142
D ++ A I++S++++ +RL + RL +A + PNLWDDP A ++ R+ +L+
Sbjct: 3 ADAQNTADKISKSLELLAQRLDVETAPYRLEEFNARVEDPNLWDDPDAAQKLMRDRQALV 62
Query: 143 GKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELD 202
+ + +QEL ++I++I+L E D E+ E+ AL + + +KEL+ALL+GE D
Sbjct: 63 DSIATYEGIKQELADNIELIELGEMEGDDEVIAEAETALKKLAETAAQKELEALLNGEAD 122
Query: 203 PCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVD 262
++E+ AGAGGTES DWA+++ +MY WA+++GY+V L E PGE AGIK AT K+
Sbjct: 123 GNDTFLEINAGAGGTESCDWANILSRMYVRWAEKKGYKVELQSESPGEEAGIKSATYKIS 182
Query: 263 GEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIER 322
G A+G+ K+E GVHRLVRISPFDS +RHTSF ++ V P D + + IN SD+RI+
Sbjct: 183 GPNAYGWLKSESGVHRLVRISPFDSAAKRHTSFTSIWVYPVV-DDNIEIDINPSDIRIDT 241
Query: 323 FRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ 382
+RS GAGGQH NTTDSAVRI H PTGI T +E+SQHQN+ AM L+SR+ Q+E+ R+
Sbjct: 242 YRSSGAGGQHVNTTDSAVRITHHPTGIVVTS-SEKSQHQNRDIAMKALKSRLYQMELDRR 300
Query: 383 -AQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
A +N H ++ D WGNQIR+YVL PY+MVKDLRTN+E SD VL+GDLDG + + L
Sbjct: 301 NAAINEAH-ENKGDAGWGNQIRSYVLQPYQMVKDLRTNFETSDTKGVLDGDLDGLMGAAL 359
Query: 442 SASL 445
+ ++
Sbjct: 360 ALAV 363
>gi|254510235|ref|ZP_05122302.1| peptide chain release factor 2 [Rhodobacteraceae bacterium KLH11]
gi|221533946|gb|EEE36934.1| peptide chain release factor 2 [Rhodobacteraceae bacterium KLH11]
Length = 375
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 172/354 (48%), Positives = 247/354 (69%), Gaps = 4/354 (1%)
Query: 90 AAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVK 149
A I +S++++ +R+ ++ RL +A + PNLWD+P +A ++ RE L+ ++ +
Sbjct: 10 AEIEKSLELLAQRMDYETALHRLEEFNARVEDPNLWDNPENAQKLMRERQMLVDAIETYE 69
Query: 150 AFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIE 209
+ + +L ++I++I+L E D E+ ++ +A+ +R KS +KEL+ALL GE D ++E
Sbjct: 70 SIKTDLSDNIELIELGEMEEDGEVVQDAEDAIQKLRAKSAKKELEALLDGEADSNDTFLE 129
Query: 210 VQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGY 269
+ +GAGGTES DWASM+ +MY WA+++GY V L E GE AGIK A K+ G A+G+
Sbjct: 130 INSGAGGTESCDWASMLARMYVRWAEKKGYTVELQSETAGEEAGIKSAAYKITGHNAYGW 189
Query: 270 AKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAG 329
K+E GVHRLVRISPFDS +RHTSF +V V P D + +++N SD+RI+ +RS GAG
Sbjct: 190 LKSESGVHRLVRISPFDSAAKRHTSFCSVWVYP-VVDDNIEIEVNPSDIRIDTYRSSGAG 248
Query: 330 GQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ-AQMNAE 388
GQH NTTDSAVRI H+PTGI T +E+SQHQN+ AM L+SR+ Q E+ R+ A +NA
Sbjct: 249 GQHVNTTDSAVRITHLPTGIVVTS-SEKSQHQNRDIAMKALKSRLYQQELDRRNADINAA 307
Query: 389 HTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
H ++ D WGNQIR+YVL PY+MVKDLRTN+E SD VL+GDLDGF+ + L+
Sbjct: 308 H-EAKGDAGWGNQIRSYVLQPYQMVKDLRTNHETSDTKGVLDGDLDGFMAATLA 360
>gi|407798852|ref|ZP_11145755.1| peptide chain release factor 2 [Oceaniovalibus guishaninsula
JLT2003]
gi|407059200|gb|EKE45133.1| peptide chain release factor 2 [Oceaniovalibus guishaninsula
JLT2003]
Length = 375
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 170/354 (48%), Positives = 241/354 (68%), Gaps = 4/354 (1%)
Query: 90 AAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVK 149
AAI +S+ ++ +R+ W RL A + P LWDDP A ++ R+ +L+ M +
Sbjct: 10 AAIRKSLDLLAQRMDWPTAAHRLEEFDARVEDPALWDDPDTAQKLMRDRQTLVDAMDRYR 69
Query: 150 AFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIE 209
+EL +++++I L E D ++ E+ AL +R ++ E E++ALL+GE D ++E
Sbjct: 70 TMTRELDDNVELIALGEAEGDADIVAEAEAALRGLRDRAAEAEIEALLNGEADANDTFLE 129
Query: 210 VQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGY 269
+ +GAGGTES DWA+M+ +MY WA+++GY+V L E PGE AGIK A K+ G A+G+
Sbjct: 130 INSGAGGTESCDWAAMLARMYVRWAEKKGYKVELQSESPGEEAGIKSAAYKISGHNAYGW 189
Query: 270 AKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAG 329
K+E GVHRLVRISP+DS RRHTSF++V V P D + +++N SD+R++ +RS GAG
Sbjct: 190 LKSESGVHRLVRISPYDSAARRHTSFSSVWVYPVV-DDNIEIEVNPSDIRLDTYRSSGAG 248
Query: 330 GQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ-AQMNAE 388
GQH NTTDSAVRI HIPTGI T +E+SQHQN+ AM L+SR+ Q+E+ R+ A +NA
Sbjct: 249 GQHVNTTDSAVRITHIPTGIVVTS-SEKSQHQNRDIAMKALKSRLYQMELDRRNADINAA 307
Query: 389 HTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
H ++ D WGNQIR+YVL PY+MVKDLRT E SD VL+GDLD F+ + L+
Sbjct: 308 H-EAKGDAGWGNQIRSYVLQPYQMVKDLRTQVETSDTQGVLDGDLDRFMAATLA 360
>gi|99080709|ref|YP_612863.1| peptide chain release factor 2 [Ruegeria sp. TM1040]
gi|122984362|sp|Q1GIB5.1|RF2_SILST RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|99036989|gb|ABF63601.1| bacterial peptide chain release factor 2 (bRF-2) [Ruegeria sp.
TM1040]
Length = 374
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 170/354 (48%), Positives = 242/354 (68%), Gaps = 5/354 (1%)
Query: 90 AAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVK 149
A I +S+ ++ +R+ W+ RL +A + PNLWDDP A ++ R+ SL+ M K
Sbjct: 10 ADIEKSLDLLAQRMNWETAEFRLEEFNARVEDPNLWDDPAAAQKLMRDRQSLVDAMDTYK 69
Query: 150 AFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIE 209
+ Q+L + +++I+L E D E+ ++ + L ++ K+ +KEL+ALL GE DP ++E
Sbjct: 70 SIRQDLQDSVELIELGEMEEDAEVVKDAEDTLKALKEKAAQKELEALLDGETDPNDAFLE 129
Query: 210 VQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGY 269
++AGAGGTE+ DWASM+ +MY WA+ RG+ V L +E G AGIK AT ++ G A+G+
Sbjct: 130 IKAGAGGTEACDWASMLARMYVRWAESRGFSVELQEEQAGAEAGIKSATYQIKGHNAYGW 189
Query: 270 AKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAG 329
K+E G HRLVRISPF G R TSFAAV P D + +++N +D+RI+ +RS GAG
Sbjct: 190 LKSESGTHRLVRISPFGKGT-RETSFAAVGAYPVI-DDNIEIEVNPADIRIDTYRSSGAG 247
Query: 330 GQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ-AQMNAE 388
GQH NTTDSAVRI H PTGI T +E+SQHQN+ AM L+SR+ QLE+ R+ A++NA
Sbjct: 248 GQHVNTTDSAVRITHEPTGIVVTS-SEKSQHQNRDIAMKALKSRLYQLELDRRNAEVNAL 306
Query: 389 HTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
H ++ D WGNQIR+YV+ PY+MVKDLRTN+E +D VL+GDLDGF+ + L+
Sbjct: 307 H-EAKGDAGWGNQIRSYVMQPYQMVKDLRTNHETADTKGVLDGDLDGFMAATLA 359
>gi|344924433|ref|ZP_08777894.1| protein chain release factor B [Candidatus Odyssella
thessalonicensis L13]
Length = 367
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 165/366 (45%), Positives = 244/366 (66%), Gaps = 5/366 (1%)
Query: 87 SHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMK 146
S A + Q++ +IK+ L W N +L L+ + P LWDDP A ++ +E +L +
Sbjct: 7 SAAKLVEQNLSLIKRHLDWDNAVQKLASLNQQAESPTLWDDPAAAQKLLKEREALTNAVS 66
Query: 147 EVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSC 206
+++A +Q L+++I +I+L E D + LE+ +A+ ++++ +L+ LLSGE D +C
Sbjct: 67 KIRALQQRLVDNIGLIELGELEGDDSIVLEAEQAIFDLQKECGRLQLETLLSGEADANNC 126
Query: 207 YIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYA 266
+IE+ AGAGGTE+ DW M+ +MY WA+ + Y++ L+DE PG+ AG+K T+K G A
Sbjct: 127 FIEINAGAGGTEAQDWTQMLARMYSRWAESKKYKIELIDENPGDEAGLKSITMKFSGFQA 186
Query: 267 FGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSG 326
+G+ K E GVHRLVRISPFDS RRHTSFA+V V P D S + + E DLRI+ +R+
Sbjct: 187 YGWLKTESGVHRLVRISPFDSNARRHTSFASVWVYPEI-DDSIDIVVEEKDLRIDTYRAS 245
Query: 327 GAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMN 386
GAGGQH N T+SA+RI H+PT I CQN+RSQH+N+A AM +L++R+ +LE+ ++ +
Sbjct: 246 GAGGQHVNKTESAIRITHLPTNIAVQCQNDRSQHRNRAQAMSMLKARLYELELRKREEAA 305
Query: 387 AEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLD 446
+ S T+I WG+QIR+YVL PY+MVKDLRT E + VL+GDLD YL A+L
Sbjct: 306 LSASASKTEIGWGHQIRSYVLQPYQMVKDLRTGVEKGNAQGVLDGDLD----DYLEAALA 361
Query: 447 KDEGGQ 452
+ GG+
Sbjct: 362 QRIGGE 367
>gi|359408232|ref|ZP_09200704.1| peptide chain release factor 2 [SAR116 cluster alpha
proteobacterium HIMB100]
gi|356676989|gb|EHI49338.1| peptide chain release factor 2 [SAR116 cluster alpha
proteobacterium HIMB100]
Length = 369
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 161/355 (45%), Positives = 245/355 (69%), Gaps = 1/355 (0%)
Query: 91 AIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKA 150
AI ++++++K + W + R A+++ + WD+ A + RE L ++ +
Sbjct: 11 AIRTAVELLRKHVGWDTAHDRAAAFEAQISASDFWDNQETAQNVMREKTHLDQQIAAITD 70
Query: 151 FEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEV 210
E L + IDMI+LA EE DT+L E+ L + + +K+L++LLSGE D +C++E+
Sbjct: 71 LETRLQDQIDMIELAEEEGDTDLVAEAGAELTRLAEIAGKKQLESLLSGEADANNCFLEI 130
Query: 211 QAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYA 270
GAGGTE+ DWA+M+L+MY WA+ RG+++ +++E GE AGIK AT++V G A+G+
Sbjct: 131 HPGAGGTEAQDWAAMLLRMYSRWAEARGFKLEVIEESDGEEAGIKSATLRVMGINAYGWM 190
Query: 271 KAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGG 330
K E GVHRLVRISP+DS RRHTSFA+V + P D + +Q+ E DLR++ +R+ GAGG
Sbjct: 191 KTESGVHRLVRISPYDSSARRHTSFASVWIYPEV-DDNIDIQLEEKDLRVDTYRASGAGG 249
Query: 331 QHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHT 390
QH NTTDSA+RI HIPT I CQ++RSQH+N+A+A+ +L++R+ +LE+ ++ Q ++
Sbjct: 250 QHVNTTDSAIRITHIPTNIVVQCQSDRSQHRNRATALNMLKARIYELELQKREQAAMDNN 309
Query: 391 QSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ +DI WG+QIR+YVLHPY+MVKDLRTN E + +VL+G LD FI + L+A +
Sbjct: 310 ATKSDIGWGSQIRSYVLHPYQMVKDLRTNVETGNSQAVLDGALDDFIEASLAARV 364
>gi|85374178|ref|YP_458240.1| protein chain release factor B [Erythrobacter litoralis HTCC2594]
gi|84787261|gb|ABC63443.1| protein chain release factor B [Erythrobacter litoralis HTCC2594]
Length = 375
Score = 341 bits (875), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 171/352 (48%), Positives = 242/352 (68%), Gaps = 3/352 (0%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
I ++ ++++ L W+ RL+ L+A + P+LW+DP A ISRE +L +K V+
Sbjct: 12 IEAALALVRQSLDWERALRRLDELNARVQDPDLWNDPKEAQAISREQKTLETAVKTVREI 71
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
E+ + I+ ++L E D ++ E L +L + ++ ++ ALLSGE D YIE+
Sbjct: 72 GSEMADAIEFVELGEAEGDEDVVKEGLASLQKLADRADADKVQALLSGEADGNDTYIEIH 131
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AGAGGTES DWA M+L+MY WA+RRG++V ++ G+ AGIK AT+ V GE A+GYAK
Sbjct: 132 AGAGGTESQDWAEMLLRMYARWAERRGFKVETVEYQAGDQAGIKSATLLVKGENAYGYAK 191
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
E GVHRLVRISP+DS RRHTSF++V V P D + ++IN+SDL+I+ +R+ GAGGQ
Sbjct: 192 TESGVHRLVRISPYDSSARRHTSFSSVWVYPVI-DDNIEIEINDSDLKIDTYRASGAGGQ 250
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIA-RQAQMNAEHT 390
H NTTDSAVRI H PTGI QN+RSQH+N+A+AM +L++R+ + E+A R+A + E+
Sbjct: 251 HVNTTDSAVRITHQPTGIVVASQNDRSQHKNRATAMNMLKARLFEREMAEREAAASGEY- 309
Query: 391 QSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
Q T+I WG+QIR+YVL PY+MVKDLRT S PD VL+G LD +I + L+
Sbjct: 310 QEKTEIGWGHQIRSYVLQPYQMVKDLRTGVTSSSPDDVLDGALDPYISAALA 361
>gi|259419215|ref|ZP_05743132.1| peptide chain release factor 2 [Silicibacter sp. TrichCH4B]
gi|259345437|gb|EEW57291.1| peptide chain release factor 2 [Silicibacter sp. TrichCH4B]
Length = 374
Score = 341 bits (874), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 170/354 (48%), Positives = 241/354 (68%), Gaps = 5/354 (1%)
Query: 90 AAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVK 149
A I +S+ ++ +R+ W+ RL +A + PNLWDDP A ++ R+ SL+ + K
Sbjct: 10 ADIEKSLDLLAQRMNWETAEFRLEEFNARVEDPNLWDDPAAAQKLMRDRQSLVDAIDTYK 69
Query: 150 AFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIE 209
Q+L + +++I+L E D E+ ++ E L ++ K+ +KEL+ALL GE DP ++E
Sbjct: 70 GIRQDLDDSVELIELGEMEEDDEVVKDAEETLKALKEKAAQKELEALLDGETDPNDAFLE 129
Query: 210 VQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGY 269
++AGAGGTE+ DWASM+ +MY WA+ RG+ V L +E G AGIK AT ++ G A+G+
Sbjct: 130 IKAGAGGTEACDWASMLARMYVRWAESRGFSVDLQEEQAGAEAGIKSATYQIKGHNAYGW 189
Query: 270 AKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAG 329
K+E G HRLVRISPF G R TSFAAV P D + +++N +D+RI+ +RS GAG
Sbjct: 190 LKSESGTHRLVRISPFGKGT-RETSFAAVGAYPVI-DDNIEIEVNPADIRIDTYRSSGAG 247
Query: 330 GQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ-AQMNAE 388
GQH NTTDSAVRI H PTGI T +E+SQHQN+ AM L+SR+ QLE+ R+ A++NA
Sbjct: 248 GQHVNTTDSAVRITHEPTGIVVTS-SEKSQHQNRDIAMKALKSRLYQLELDRRNAEVNAL 306
Query: 389 HTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
H ++ D WGNQIR+YV+ PY+MVKDLRTN+E +D VL+GDLDGF+ + L+
Sbjct: 307 H-EAKGDAGWGNQIRSYVMQPYQMVKDLRTNHETADTKGVLDGDLDGFMAATLA 359
>gi|84684982|ref|ZP_01012882.1| peptide chain release factor 2 [Maritimibacter alkaliphilus
HTCC2654]
gi|84667317|gb|EAQ13787.1| peptide chain release factor 2 [Maritimibacter alkaliphilus
HTCC2654]
Length = 375
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 173/352 (49%), Positives = 242/352 (68%), Gaps = 2/352 (0%)
Query: 91 AIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKA 150
AI +S+ ++++R+ W+ RL L+A P LW+DP A ++ RE SL+ +M KA
Sbjct: 11 AIEKSLALLRQRIGWETAEHRLEELNAMTEDPELWNDPDRAQKLMRERQSLVAQMDGYKA 70
Query: 151 FEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEV 210
EQE + +++I+L E+D E+ ++ AL ++ ++ E++ALL+GE DP ++EV
Sbjct: 71 MEQEKNDSVELIELGEMEDDDEVVKDAEAALKALKERAAAAEIEALLNGEADPNDTFLEV 130
Query: 211 QAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYA 270
+GAGGTES DWASM+ +MY WA+ GY+V L PGE AGIK AT K+ G A+G+
Sbjct: 131 HSGAGGTESCDWASMLARMYVRWAEAHGYKVELQSTTPGEEAGIKSATYKISGHNAYGWL 190
Query: 271 KAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGG 330
K+E GVHRLVRISP+DS RRHTSF++V V P D + V++ +D+RI+ +RS GAGG
Sbjct: 191 KSESGVHRLVRISPYDSAARRHTSFSSVWVYP-VVDDNIEVEVAPNDIRIDTYRSSGAGG 249
Query: 331 QHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHT 390
QH NTTDSAVRI HIPTGI T +E+SQHQN+ AM L+SR+ Q+E+ R+ Q E
Sbjct: 250 QHVNTTDSAVRITHIPTGIVVTS-SEKSQHQNRDIAMKALKSRLYQMELDRRNQAINEAH 308
Query: 391 QSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
++ D WGNQIR+YVL PY+MVKDLRT++E SD VL+GDLDG + + L+
Sbjct: 309 ENKGDAGWGNQIRSYVLQPYQMVKDLRTSFETSDTQGVLDGDLDGLMAATLA 360
>gi|316934390|ref|YP_004109372.1| peptide chain release factor 2 [Rhodopseudomonas palustris DX-1]
gi|315602104|gb|ADU44639.1| peptide chain release factor 2 [Rhodopseudomonas palustris DX-1]
Length = 376
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 172/355 (48%), Positives = 240/355 (67%), Gaps = 9/355 (2%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNK----PNLWDDPVHAGRISREHGSLMGKMKE 147
I QS+ ++++ L VRL AELNK PNLW+DP A ++ +E SL +
Sbjct: 12 IKQSVGLLRRHLDVDQSTVRL----AELNKLAEDPNLWNDPQKAQKLMQERTSLEDALTG 67
Query: 148 VKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCY 207
+ E+EL ++IDMI+L E D + E+ EAL ++++ +EL+ALLSGE D Y
Sbjct: 68 IGKVERELTDNIDMIELGEAEGDEGIVKEAEEALKALKKEVARRELEALLSGEADRFDTY 127
Query: 208 IEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAF 267
+EV AGAGGTES DWASM+L+MY WA++ G+++ ++E GE AGIK ATI++ G A+
Sbjct: 128 LEVHAGAGGTESQDWASMLLRMYVRWAEKHGFKIEYLEESDGEEAGIKSATIQISGHNAY 187
Query: 268 GYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGG 327
G+ K E GVHRLVRISPFDS RRHTSF++V + P D S + I ESD+R + RSGG
Sbjct: 188 GWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVI-DDSIKIDIKESDVRTDTMRSGG 246
Query: 328 AGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNA 387
AGGQH N T+SAVR+ HIPTG+ CQ RSQH+N+A A +L++R+ ++E+ ++ + A
Sbjct: 247 AGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLYEIELKKREEQAA 306
Query: 388 EHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
+ T+I WG+QIR+YVL PY+MVKDLRT + SD VL+GDLD F+ + L+
Sbjct: 307 ADQAAKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDEFMAATLA 361
>gi|83311912|ref|YP_422176.1| peptide chain release factor 2 [Magnetospirillum magneticum AMB-1]
gi|123541518|sp|Q2W3F8.1|RF2_MAGMM RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|82946753|dbj|BAE51617.1| Protein chain release factor B [Magnetospirillum magneticum AMB-1]
Length = 371
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 174/358 (48%), Positives = 240/358 (67%), Gaps = 3/358 (0%)
Query: 89 AAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEV 148
A I +S ++K+ L W +RL+ L+A P+LW+D A +I RE L ++
Sbjct: 9 AQDIRRSAALLKRHLNWDEALMRLDELNASAENPDLWNDAGAAQKIMRERNELDSAIQGC 68
Query: 149 KAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYI 208
+A E+EL + ++I+L E D + ++ E + ++ ++ + EL+ LLSGE D CY+
Sbjct: 69 RALERELADLAELIELGEMEGDQTVIDDAEEQVRALKERAAKMELETLLSGEADHNDCYM 128
Query: 209 EVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFG 268
E+ AGAGGTES DWA M+L+MY WA++ GY+V ++E GE AGIK ATI++ G A+G
Sbjct: 129 EINAGAGGTESQDWAEMLLRMYTRWAEKHGYKVEWLEESAGEQAGIKSATIRILGHNAYG 188
Query: 269 YAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGA 328
+ K E GVHRLVRISP+DS RRHTSF++ V P D + +QINES+ RI+ +R+ GA
Sbjct: 189 WLKTESGVHRLVRISPYDSAARRHTSFSSAWVYPVI-DDTIDIQINESECRIDTYRASGA 247
Query: 329 GGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI-ARQAQMNA 387
GGQH N TDSAVRI HIPTGI CQ ERSQHQN+A A +L++R+ + E+ R+A A
Sbjct: 248 GGQHINKTDSAVRITHIPTGIAVACQMERSQHQNRARAWDMLRARLYEAELQKREAAAQA 307
Query: 388 EHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
Q TDI WG+QIR+YVL PY+MVKDLRTN E SD VL+GDLD F+ + L+A +
Sbjct: 308 LEDQK-TDIGWGHQIRSYVLQPYQMVKDLRTNVETSDTQGVLDGDLDMFMAASLAARV 364
>gi|56697430|ref|YP_167798.1| peptide chain release factor 2 [Ruegeria pomeroyi DSS-3]
gi|56679167|gb|AAV95833.1| peptide chain release factor 2 [Ruegeria pomeroyi DSS-3]
Length = 375
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 169/352 (48%), Positives = 245/352 (69%), Gaps = 4/352 (1%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
I +S++++ +R+ + RL +A + PNLWD+P +A ++ RE +L+ + K
Sbjct: 12 IQKSLRLLAQRMDQETAQHRLEEFNARVEDPNLWDNPENAQKLMRERQTLVDALDIYKGI 71
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
E +L ++I++I+L E+D ++ ++ AL +R ++ EKEL+ALL GE D ++E+
Sbjct: 72 ETDLADNIELIELGEMEDDQDVIKDAEAALKALRERAAEKELEALLDGEADGNDTFLEIN 131
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AGAGGTES DWASM+ +MY WA+++GY+V L E G+ AGIK A K+ G A+G+ K
Sbjct: 132 AGAGGTESCDWASMLARMYVRWAEKKGYKVELQSESAGDEAGIKSAAYKISGHNAYGWLK 191
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
+E GVHRLVRISP+D+ +RHTSF++V V P D + +++N SD+RI+ +RS GAGGQ
Sbjct: 192 SESGVHRLVRISPYDAAAKRHTSFSSVWVYPVV-DDNIEIEVNPSDIRIDTYRSSGAGGQ 250
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ-AQMNAEHT 390
H NTTDSAVRI HIPTGI T +E+SQHQN+ AM L+SR+ Q E+ R+ A++NA H
Sbjct: 251 HVNTTDSAVRITHIPTGIVVTS-SEKSQHQNRDIAMKALKSRLYQQELDRRNAEINAAH- 308
Query: 391 QSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
++ D WGNQIR+YVL PY+MVKDLRT +E SD VL+G LDGF+ + L+
Sbjct: 309 EAKGDAGWGNQIRSYVLQPYQMVKDLRTGHETSDTKGVLDGALDGFMAATLA 360
>gi|149914781|ref|ZP_01903311.1| LexA repressor [Roseobacter sp. AzwK-3b]
gi|149811574|gb|EDM71409.1| LexA repressor [Roseobacter sp. AzwK-3b]
Length = 375
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 168/353 (47%), Positives = 237/353 (67%), Gaps = 2/353 (0%)
Query: 90 AAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVK 149
A I S++++++R+ W+ RL +A + P LWDDP A ++ R+ L+ +
Sbjct: 10 AEIKTSLELLRQRMGWETARHRLEEFNARVEDPQLWDDPAKAQKLMRDRQGLVDAITTHD 69
Query: 150 AFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIE 209
+QE+ +++++I+L E D ++ E+ A+ + RK+ +KEL+ALL+GE D ++E
Sbjct: 70 TIQQEMQDNVELIELGEMEGDPDVVAEAEAAIKALARKAAQKELEALLNGEADANDAFLE 129
Query: 210 VQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGY 269
+ AGAGGTES DWASM+ +MY WA++ GY V L E GE AGIK T KV G A+G+
Sbjct: 130 IHAGAGGTESCDWASMLARMYVRWAEQHGYTVELQSETAGEEAGIKSVTYKVTGHNAYGW 189
Query: 270 AKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAG 329
K+E GVHRLVRISPFDS +RHTSF++V V P D + +++N +D+RI+ FRS GAG
Sbjct: 190 LKSESGVHRLVRISPFDSAAKRHTSFSSVWVYPVV-DDNIEIEVNPADIRIDTFRSSGAG 248
Query: 330 GQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEH 389
GQH N TDSAVRI H PTGI T +E+SQHQN+ AM L+SR+ Q+E+ R+ + AE
Sbjct: 249 GQHVNKTDSAVRITHHPTGIVVTS-SEKSQHQNRDIAMKALKSRLYQMELDRRNEAIAEA 307
Query: 390 TQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
+ D WGNQIR+YVL PY+MVKDLRT+ E SD VL+GDLD F+ + L+
Sbjct: 308 HDAKGDAGWGNQIRSYVLQPYQMVKDLRTSVETSDTKGVLDGDLDQFMAATLA 360
>gi|84515548|ref|ZP_01002910.1| peptide chain release factor 2 [Loktanella vestfoldensis SKA53]
gi|84510831|gb|EAQ07286.1| peptide chain release factor 2 [Loktanella vestfoldensis SKA53]
Length = 374
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 165/360 (45%), Positives = 242/360 (67%), Gaps = 2/360 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
+++ AI +S+ ++ +R+ ++ RL A + P LWDDP A ++ R+ L+ +
Sbjct: 6 QNNVDAIQKSLNLLAQRMDYETARYRLEEFDARVEDPTLWDDPDAAQKLMRDRQVLVDTL 65
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
+QEL ++I++I++ E D ++ E+ EAL ++R K+ +KEL+ALL GE D
Sbjct: 66 TMHDTIKQELADNIELIEMGEMEGDADIITEAEEALKSLREKAAQKELEALLDGEADAND 125
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
++EV AGAGGTES DWA+M+ +MY WA+++GY+V L G+ AGIK T K+ G
Sbjct: 126 TFLEVNAGAGGTESCDWANMLSRMYVRWAEKKGYKVELQSMQSGDEAGIKSVTYKIMGHN 185
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
A+G+ K+E GVHRLVRISPFDS +RHTSF +V V P D + +++N SD+R++ +RS
Sbjct: 186 AYGWLKSESGVHRLVRISPFDSAAKRHTSFTSVKVYPVV-DDNIEIEVNPSDIRLDTYRS 244
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQM 385
GAGGQH NTTDSAVRI H PTGI T +E+SQHQN+ AM L+SR+ Q+E+ +++ +
Sbjct: 245 SGAGGQHVNTTDSAVRITHFPTGIVVTS-SEKSQHQNRDIAMKALKSRLYQMELDKRSAL 303
Query: 386 NAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
E ++ D WGNQIR+YVL PY+MVKDLRT +E SD VL+GDLDG + + L+ +
Sbjct: 304 VNEAHENAGDAGWGNQIRSYVLQPYQMVKDLRTGFETSDTKGVLDGDLDGLMGATLALDM 363
>gi|225847994|ref|YP_002728157.1| peptide chain release factor 2 [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225644274|gb|ACN99324.1| peptide chain release factor 2 [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 370
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 164/356 (46%), Positives = 237/356 (66%), Gaps = 1/356 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
K+ I + +K L+ + L + +L +++ PN W+DP A IS + L K+
Sbjct: 7 KTKQEEIIEKWNNLKDILKPEKLQEEIKVLDSQMADPNFWNDPKKAQEISSKRNYLGEKL 66
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
+E+ ++++ + D I+L E D L E + + + ++ + E+ +LLS E+D +
Sbjct: 67 EEILKIDKKVKDLQDYIQLLEMEKDESLYTEVEKEINHLEKELERLEISSLLSDEMDSKN 126
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
+ +QAG+GG E+ DW M+++MY WA+ +G++V ++D P ++AGIK ATI + G +
Sbjct: 127 AILTLQAGSGGVEACDWTQMLMRMYLRWAEGKGFQVEIVDYQPDDVAGIKSATIIIKGPF 186
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
A+GY K E GVHRLVRISPFD+ KRRHTSFAAV+VIP D V+INE DLRI+ FR+
Sbjct: 187 AYGYLKGEQGVHRLVRISPFDANKRRHTSFAAVSVIPEI-DEEIKVEINEEDLRIDTFRA 245
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQM 385
GAGGQH N TDSAVRI HIPTGI CQ+ERSQ QNK A+ +L++++ QLE+ +Q +
Sbjct: 246 SGAGGQHVNKTDSAVRITHIPTGIVVACQSERSQLQNKLKALNMLKAKLYQLELQKQKEK 305
Query: 386 NAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
E DI+WGNQIR+YV PY+MVKDLRT YEV + ++V++GD+DGFI SYL
Sbjct: 306 QKELEGEKKDITWGNQIRSYVFQPYQMVKDLRTGYEVGNVEAVMDGDIDGFIESYL 361
>gi|87200328|ref|YP_497585.1| peptide chain release factor 2 [Novosphingobium aromaticivorans DSM
12444]
gi|87136009|gb|ABD26751.1| bacterial peptide chain release factor 2 (bRF-2) [Novosphingobium
aromaticivorans DSM 12444]
Length = 375
Score = 338 bits (866), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 166/357 (46%), Positives = 235/357 (65%), Gaps = 1/357 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
++H I ++ +++K L W RL+ L+A + P LWDDP A + RE L +
Sbjct: 6 QAHIDRIEAALALVRKFLDWDRAVRRLDELNARVEDPKLWDDPKKAEEVMRERRRLEASI 65
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
V QE+ + I+ ++L E D + E L L + ++ ++ ALL+GE D +
Sbjct: 66 GTVNQIGQEMADAIEFVELGEMEGDEDTINEGLATLAALAERADNDKVQALLAGEADANN 125
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
++EV AGAGGTES DWA M+ +MY WA+R GY+V L+D GE AGIK AT+ + GE
Sbjct: 126 AFLEVHAGAGGTESQDWAEMLQRMYTRWAERHGYKVELVDYHAGEAAGIKSATLLIKGEN 185
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
A+GYAK E GVHRLVRISP+DS RRHTSF++V V P D + V+IN +DL+I+ +R+
Sbjct: 186 AYGYAKTESGVHRLVRISPYDSSARRHTSFSSVWVYPEI-DDNIEVEINPADLKIDTYRA 244
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQM 385
GAGGQH NTTDSAVRI H+PTGI QN+RSQH+N+A+AMG+L++R+ + E+A++
Sbjct: 245 SGAGGQHVNTTDSAVRITHVPTGIIVASQNDRSQHKNRATAMGMLKARIYEAELAKREAA 304
Query: 386 NAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
+ + T+I WG+QIR+YVL PY+ VKDLRT ++P VL+G LD F+ + LS
Sbjct: 305 ASGEYAAKTEIGWGHQIRSYVLQPYQQVKDLRTGVVSTNPTEVLDGALDPFMAAALS 361
>gi|159043721|ref|YP_001532515.1| peptide chain release factor 2 [Dinoroseobacter shibae DFL 12]
gi|157911481|gb|ABV92914.1| peptide chain release factor 2 [Dinoroseobacter shibae DFL 12]
Length = 375
Score = 338 bits (866), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 170/353 (48%), Positives = 241/353 (68%), Gaps = 4/353 (1%)
Query: 91 AIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKA 150
AI +S+ ++ +RL ++ RL A + PNLW+D A ++ R+ L+ MK +
Sbjct: 11 AIRKSLDLLAQRLDYETAPHRLEEFDAMIEDPNLWNDQARAQKLMRDRQMLVDAMKTYEG 70
Query: 151 FEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEV 210
+QEL ++I++I+L E D E+ ++ EAL ++ + +KE++ALL GE D ++E+
Sbjct: 71 IKQELEDNIELIELGEMEADAEVVTDAEEALKSLAETAAKKEIEALLDGEADGNDTFLEI 130
Query: 211 QAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYA 270
+GAGGTES DWASM+ +MY WA+ +GY V L + PGE AGIK A K+ G A+G+
Sbjct: 131 NSGAGGTESCDWASMLARMYVRWAEAKGYTVELQSQSPGEEAGIKSAAYKISGPNAYGWL 190
Query: 271 KAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGG 330
K+E GVHRLVRISP+DS RRHTSF++V V P D + +++N +D+RI+ +RS GAGG
Sbjct: 191 KSESGVHRLVRISPYDSAARRHTSFSSVWVYPVV-DDNIEIEVNPADIRIDTYRSSGAGG 249
Query: 331 QHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ-AQMNAEH 389
QH NTTDSAVRI H+PTGI T +E+SQHQN+ AM L+SR+ Q+E+ R+ A +N H
Sbjct: 250 QHVNTTDSAVRITHVPTGIV-TTSSEKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAH 308
Query: 390 TQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
++ D WGNQIR+YVL PY+MVKDLRT YE SD VL+GDLDG + + L+
Sbjct: 309 -EAKGDAGWGNQIRSYVLQPYQMVKDLRTGYETSDTAGVLDGDLDGLMSATLA 360
>gi|338707960|ref|YP_004662161.1| peptide chain release factor 2 [Zymomonas mobilis subsp. pomaceae
ATCC 29192]
gi|336294764|gb|AEI37871.1| peptide chain release factor 2 [Zymomonas mobilis subsp. pomaceae
ATCC 29192]
Length = 375
Score = 337 bits (864), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 172/358 (48%), Positives = 246/358 (68%), Gaps = 3/358 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
++H I +S+ ++++ L W RL+ L+A + P+LWDD A + RE G L +
Sbjct: 6 QAHVDHIQESLALLRRFLDWDRALRRLDELNARVEDPHLWDDARAAQEVMRERGRLDESI 65
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
+A E+EL E+ID+I++A E + ++ +++ AL + ++ ++ ALLSGE D
Sbjct: 66 AATRAIERELQENIDLIEMAEAEEEEDMVKDAIAALAHLAERANRDKVKALLSGEADSND 125
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
YIEV AGAGGTES DWA M+ +MY+ WA+R G+RV L+D GE AGIK AT+ + GE
Sbjct: 126 TYIEVNAGAGGTESQDWAEMLSRMYQRWAEREGFRVELVDYHAGEQAGIKSATLLIKGES 185
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
A+GYAK E GVHRLVRISPFDS RRHTSFA+VAV P D +++ + DL+I+ +RS
Sbjct: 186 AYGYAKTENGVHRLVRISPFDSNARRHTSFASVAVYPVV-DDDIDIEVLDKDLKIDTYRS 244
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIA-RQAQ 384
GAGGQH NTTDSAVRI H+PTGI CQN+RSQH+N+A AM L++R+ + E+ R+A+
Sbjct: 245 SGAGGQHVNTTDSAVRITHMPTGIVVACQNQRSQHKNRAEAMKQLKARLYERELQIREAE 304
Query: 385 MNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
+A + + ++I WG+QIR+YVL PY++VKDLRT + P VL+G+L+ FI + L+
Sbjct: 305 ASAGYA-AKSEIGWGHQIRSYVLQPYQLVKDLRTGITSTAPSDVLDGNLEDFIAAALA 361
>gi|374575227|ref|ZP_09648323.1| peptide chain release factor 2 [Bradyrhizobium sp. WSM471]
gi|374423548|gb|EHR03081.1| peptide chain release factor 2 [Bradyrhizobium sp. WSM471]
Length = 376
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 177/355 (49%), Positives = 238/355 (67%), Gaps = 9/355 (2%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNK----PNLWDDPVHAGRISREHGSLMGKMKE 147
I QS+ ++++ L + RL AELNK PNLW+DP A ++ +E SL +
Sbjct: 12 IKQSVGLLRRHLDVEKSTARL----AELNKLAEDPNLWNDPQKAQKLMQERTSLEDALSG 67
Query: 148 VKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCY 207
+ EQEL + I MI+L E D + E+ AL T++++ +EL+ALLSGE D Y
Sbjct: 68 IGKVEQELEDDIGMIELGEAEGDEGVVKEAEAALKTLKKEVARRELEALLSGEADSFDSY 127
Query: 208 IEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAF 267
+EV AGAGGTES DWA M+L+MY WA+ G++V +++E GE AGIK ATI+V G A+
Sbjct: 128 LEVHAGAGGTESQDWAQMLLRMYSRWAETHGFKVEMLEESEGEEAGIKSATIQVSGHNAY 187
Query: 268 GYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGG 327
G+ K E GVHRLVRISPFDS RRHTSF++VAV P D + + I ESD+R++ RSGG
Sbjct: 188 GWLKTEAGVHRLVRISPFDSNARRHTSFSSVAVFPVI-DDTIKIDIKESDVRVDTMRSGG 246
Query: 328 AGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNA 387
AGGQH N T+SAVR+ HIPTG+ CQ RSQH+NKA A +L++R+ Q+E+ R+ + A
Sbjct: 247 AGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNKAQAWDMLRARLYQIELKRREEKAA 306
Query: 388 EHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
+ TDI WG+QIR+YVL PY+MVKDLRT + SD VL GDLD F+ + L+
Sbjct: 307 ADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLGGDLDDFMAATLA 361
>gi|398384190|ref|ZP_10542238.1| peptide chain release factor 2 [Sphingobium sp. AP49]
gi|397723340|gb|EJK83843.1| peptide chain release factor 2 [Sphingobium sp. AP49]
Length = 375
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 160/351 (45%), Positives = 238/351 (67%), Gaps = 1/351 (0%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
I ++ ++++ L W RL+ L+A + P LWD+ A + RE L G + +A
Sbjct: 12 IDAALDLLRRFLDWDRALRRLDELNARVEDPTLWDNAKLAQEVMRERTRLDGAISATRAI 71
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
E E + ++I++A E D ++ E++ +L + ++ E ++ ALL+GE D Y+E+
Sbjct: 72 ETEKTDTAELIEMADAEGDEDMVTEAIASLKALAERADEDKIKALLAGEADGSDTYLEIH 131
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AGAGGTES DWA ++ +MY+ WA+RRG++V L+D GE AGIK AT + GE A+GYAK
Sbjct: 132 AGAGGTESQDWAEILSRMYRRWAERRGFKVELVDYQAGETAGIKSATFLIKGENAYGYAK 191
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
E GVHRLVRISP+DS RRHTSF++V V P D + +++ ESDL+I+ +R+ GAGGQ
Sbjct: 192 TESGVHRLVRISPYDSAARRHTSFSSVWVYPVI-DDNIDIEVKESDLKIDTYRASGAGGQ 250
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQ 391
H NTTDSAVRI H+P+GI QN+RSQH+N+A+AM +L++R+ + E+ ++ + + Q
Sbjct: 251 HVNTTDSAVRITHVPSGIIVASQNDRSQHKNRATAMNMLKARLYEAELRKREEAASTDYQ 310
Query: 392 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
+ T+I WG+QIR+YVL PY++VKDLRT + PD VL+G LD F+ + LS
Sbjct: 311 AKTEIGWGHQIRSYVLQPYQLVKDLRTGVTSTAPDDVLDGALDPFMAAALS 361
>gi|315499977|ref|YP_004088780.1| peptide chain release factor 2 [Asticcacaulis excentricus CB 48]
gi|315417989|gb|ADU14629.1| peptide chain release factor 2 [Asticcacaulis excentricus CB 48]
Length = 373
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 173/359 (48%), Positives = 232/359 (64%), Gaps = 1/359 (0%)
Query: 84 DWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
D ++ A I QSI ++++RL W RL+ L+A + P LWD P A + RE L G
Sbjct: 4 DVEASARDIEQSIGLLRRRLDWDVALRRLDELNARVEDPTLWDKPEEAQSVMRERTKLSG 63
Query: 144 KMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDP 203
+ V + +EL + +D +LA E D EL E+ L ++ K+ EL+ALLSGE D
Sbjct: 64 GVDAVNSLTKELQDALDYAELADMEGDEELLEEARAMLKAIKEKAARAELEALLSGEADG 123
Query: 204 CSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDG 263
Y+E+ +GAGGTES DWA ++L+MY WA + G V++ +E PGE AGIK ATI V G
Sbjct: 124 NDAYVEINSGAGGTESCDWAGILLRMYTRWATQHGMTVSIEEETPGEQAGIKSATIMVKG 183
Query: 264 EYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERF 323
A+G+ K E GVHRLVRISPFDS RRHTSFA+V V P D+ + IN +D+R + +
Sbjct: 184 TNAYGWLKTEAGVHRLVRISPFDSNARRHTSFASVWVYPVVDDTIV-IDINPADVRTDTY 242
Query: 324 RSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQA 383
R+ GAGGQH N TDSAVR+ HIPTGI CQ RSQH N+ A +L++R+ +LE+ ++
Sbjct: 243 RASGAGGQHVNKTDSAVRLTHIPTGIAVACQAGRSQHANRDEAWKMLRARLYELELQKRE 302
Query: 384 QMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
A TDI WG+QIR+YVL PY+MVKDLRT+ E SD VL+GDLD F+ + L+
Sbjct: 303 AAQAALEDQKTDIGWGHQIRSYVLQPYQMVKDLRTDVETSDSQGVLDGDLDAFMGASLA 361
>gi|294010764|ref|YP_003544224.1| peptide chain release factor RF-2 [Sphingobium japonicum UT26S]
gi|292674094|dbj|BAI95612.1| peptide chain release factor RF-2 [Sphingobium japonicum UT26S]
Length = 375
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 161/351 (45%), Positives = 237/351 (67%), Gaps = 1/351 (0%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
I ++ ++++ L W RL+ L+A + P LWD+ A + RE L + +A
Sbjct: 12 IDAALDLLRRFLDWDRALRRLDELNARVEDPTLWDNQRQAQEVMRERTRLDAAIGATRAI 71
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
+ E + ++I++A E D ++ E++ +L + ++ E ++ ALL+GE D Y+E+
Sbjct: 72 DSEKTDTAELIEMAEAEGDEDMVNEAIASLKALADRADEDKIKALLAGEADASDTYLEIH 131
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AGAGGTES DWA M+ +MY+ WA+RRGY+V L+D G+ AGIK AT GE A+GYAK
Sbjct: 132 AGAGGTESQDWAEMLSRMYRRWAERRGYKVELVDYQAGDQAGIKSATFLFKGENAYGYAK 191
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
E GVHRLVRISP+DS RRHTSF++V V P D + +++NESDL+I+ +R+ GAGGQ
Sbjct: 192 TESGVHRLVRISPYDSSARRHTSFSSVWVYPVI-DDNIEIEVNESDLKIDTYRASGAGGQ 250
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQ 391
H NTTDSAVRI H+P+GI QN+RSQH+N+A+AM +L++R+ + E+ R+ + + Q
Sbjct: 251 HVNTTDSAVRITHVPSGIIVASQNDRSQHKNRATAMNMLKARLYEAELRRREEAASGEYQ 310
Query: 392 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
+ T+I WG+QIR+YVL PY++VKDLRT + PD VL+G LD F+ + LS
Sbjct: 311 AKTEIGWGHQIRSYVLQPYQLVKDLRTGVTSTSPDDVLDGALDPFMAAALS 361
>gi|334343687|ref|YP_004552239.1| peptide chain release factor 2 [Sphingobium chlorophenolicum L-1]
gi|334100309|gb|AEG47733.1| Peptide chain release factor 2 [Sphingobium chlorophenolicum L-1]
Length = 375
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 161/351 (45%), Positives = 237/351 (67%), Gaps = 1/351 (0%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
I ++ ++++ L W RL+ L+A + P LWD+ A + RE L + +A
Sbjct: 12 IDAALDLLRRFLDWDRALRRLDELNARVEDPTLWDNQKLAQEVMRERTRLEAAIGATRAI 71
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
+ E + ++I++A E D ++ E++ +L + ++ E ++ ALL+GE D Y+E+
Sbjct: 72 DSEKTDTAELIEMADAEGDEDMVTEAIASLKALADRADEDKIKALLAGEADASDTYLEIH 131
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AGAGGTES DWA M+ +MY+ WA+RRGY+V L+D G+ AGIK AT GE A+GYAK
Sbjct: 132 AGAGGTESQDWAEMLSRMYRRWAERRGYKVELVDYQAGDQAGIKSATFLFKGENAYGYAK 191
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
E GVHRLVRISP+DS RRHTSF++V V P D + +++NESDL+I+ +R+ GAGGQ
Sbjct: 192 TESGVHRLVRISPYDSSARRHTSFSSVWVYPVI-DDNIEIEVNESDLKIDTYRASGAGGQ 250
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQ 391
H NTTDSAVRI H+P+GI QN+RSQH+N+A+AM +L++R+ + E+ R+ + + Q
Sbjct: 251 HVNTTDSAVRITHVPSGIIVASQNDRSQHKNRATAMNMLKARLYEAELRRREEAASGEYQ 310
Query: 392 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
+ T+I WG+QIR+YVL PY++VKDLRT + PD VL+G LD F+ + LS
Sbjct: 311 AKTEIGWGHQIRSYVLQPYQLVKDLRTGVTSTSPDDVLDGALDPFMAAALS 361
>gi|110680026|ref|YP_683033.1| peptide chain release factor 2 [Roseobacter denitrificans OCh 114]
gi|123361814|sp|Q165J6.1|RF2_ROSDO RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|109456142|gb|ABG32347.1| peptide chain release factor 2 [Roseobacter denitrificans OCh 114]
Length = 374
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 171/352 (48%), Positives = 240/352 (68%), Gaps = 4/352 (1%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
I +S+ ++ +RL + RL +A + P LWDDP A ++ RE L+ M +
Sbjct: 12 IQKSLDLLAQRLDVETAPYRLEEFNARVEDPTLWDDPDAAQKLMRERQMLVDAMATHDSI 71
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
+QE+ ++I++I+L E+D ++ ++ AL + + +KEL+ALL GE D ++EV
Sbjct: 72 KQEMADNIELIELGEMEDDADVVSDAENALRALEETAAKKELEALLDGEADSNDTFLEVN 131
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AGAGGTES DWASM+ +MY WA+++GY+V L G+ AGIK AT K+ G A+G+ K
Sbjct: 132 AGAGGTESCDWASMLARMYVRWAEKKGYKVELQSMSDGDEAGIKSATYKITGLNAYGWLK 191
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
+E GVHRLVRISPFDS +RHTSF++V V P D + +++N +D+RI+ +RS GAGGQ
Sbjct: 192 SESGVHRLVRISPFDSAAKRHTSFSSVWVYP-VVDDNIDIEVNPADIRIDTYRSSGAGGQ 250
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ-AQMNAEHT 390
H NTTDSAVRI H PTGI T +E+SQHQN+ AM L+SR+ QLE+ R+ A +N H
Sbjct: 251 HVNTTDSAVRITHHPTGIVVTS-SEKSQHQNRDIAMKALKSRLYQLELDRRNAAINEAH- 308
Query: 391 QSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
++ D WGNQIR+YVL PY+MVKDLRTN+E SD VL+GDLDGF+ + L+
Sbjct: 309 ENKGDAGWGNQIRSYVLQPYQMVKDLRTNFETSDTKGVLDGDLDGFMAATLA 360
>gi|427410099|ref|ZP_18900301.1| peptide chain release factor 2 [Sphingobium yanoikuyae ATCC 51230]
gi|425712232|gb|EKU75247.1| peptide chain release factor 2 [Sphingobium yanoikuyae ATCC 51230]
Length = 375
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 160/351 (45%), Positives = 237/351 (67%), Gaps = 1/351 (0%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
I ++ ++++ L W RL+ L+A + P LWD+ A + RE L + +A
Sbjct: 12 IDAALDLLRRFLDWDRALRRLDELNARVEDPTLWDNAKLAQEVMRERTRLDSAIGATRAI 71
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
E E ++ ++I++A E D ++ E++ AL + ++ E ++ ALL+GE D Y+E+
Sbjct: 72 EAEKTDNAELIEMAEAEGDEDMVSEAIAALKALAERADEDKIKALLAGEADASDTYLEIH 131
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AGAGGTES DWA ++ +MY+ WA+RRGY+V L+D GE AGIK AT + GE A+GYAK
Sbjct: 132 AGAGGTESQDWAEILSRMYRRWAERRGYKVELVDYQAGETAGIKSATFLIKGENAYGYAK 191
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
E GVHRLVRISP+DS RRHTSF++V V P D + +++ ESDL+I+ +R+ GAGGQ
Sbjct: 192 TESGVHRLVRISPYDSAARRHTSFSSVWVYPVI-DDNIDIEVKESDLKIDTYRASGAGGQ 250
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQ 391
H NTTDSAVRI H+P+GI QN+RSQH+N+A+AM +L++R+ + E+ ++ + +
Sbjct: 251 HVNTTDSAVRITHVPSGIIVASQNDRSQHKNRATAMNMLKARLYEAELRKREEAASTDYA 310
Query: 392 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
+ T+I WG+QIR+YVL PY++VKDLRT + PD VL+G LD F+ + LS
Sbjct: 311 AKTEIGWGHQIRSYVLQPYQLVKDLRTGVTSTAPDDVLDGALDPFMAAALS 361
>gi|254487153|ref|ZP_05100358.1| peptide chain release factor 2 [Roseobacter sp. GAI101]
gi|214044022|gb|EEB84660.1| peptide chain release factor 2 [Roseobacter sp. GAI101]
Length = 374
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 173/358 (48%), Positives = 246/358 (68%), Gaps = 4/358 (1%)
Query: 89 AAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEV 148
A I++S++++ +RL + RL +A + PNLWDDP A ++ RE +L+ +
Sbjct: 9 AEQISKSLELLAQRLNVETAPYRLEEFNARVEDPNLWDDPDAAQKLMRERQALVDSIATY 68
Query: 149 KAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYI 208
+ +QEL +H+++I++ END E+ E+ AL + + +KEL+ALL GE D ++
Sbjct: 69 EGIKQELADHVELIEMGEMENDAEVVAEAEAALKALAETAAQKELEALLDGEADSNDTFL 128
Query: 209 EVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFG 268
E+ AGAGGTES DWA+++ +MY WA+++GY+V L E GE AGIK AT K+ G A+G
Sbjct: 129 EINAGAGGTESCDWANILARMYVRWAEKKGYKVELQSESAGEEAGIKSATYKISGLNAYG 188
Query: 269 YAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGA 328
+ K+E GVHRLVRISPFDS +RHTSF++V V P D + + +N SD+RI+ +RS GA
Sbjct: 189 WLKSESGVHRLVRISPFDSAAKRHTSFSSVWVYP-VVDDNIEIDVNPSDIRIDTYRSSGA 247
Query: 329 GGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ-AQMNA 387
GGQH NTTDSAVRI H PTGI T +E+SQHQN+ AM L+SR+ Q+E+ R+ A +N
Sbjct: 248 GGQHVNTTDSAVRITHHPTGIVVTS-SEKSQHQNRDIAMKALKSRLYQMELDRRNAAINE 306
Query: 388 EHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
H ++ D WGNQIR+YVL PY+MVKDLRTN+E SD VL+GDLDG + + L+ ++
Sbjct: 307 AH-ENKGDAGWGNQIRSYVLQPYQMVKDLRTNFETSDTKGVLDGDLDGLMGAALALAV 363
>gi|386395566|ref|ZP_10080344.1| peptide chain release factor 2 [Bradyrhizobium sp. WSM1253]
gi|385736192|gb|EIG56388.1| peptide chain release factor 2 [Bradyrhizobium sp. WSM1253]
Length = 376
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 176/355 (49%), Positives = 238/355 (67%), Gaps = 9/355 (2%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNK----PNLWDDPVHAGRISREHGSLMGKMKE 147
I QS+ ++++ L + RL AELNK PNLW+DP A ++ +E SL +
Sbjct: 12 IKQSVGLLRRHLDVEKSTARL----AELNKLAEDPNLWNDPQKAQKLMQERTSLEDSLSG 67
Query: 148 VKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCY 207
+ EQEL + I MI+L E D + E+ AL +++++ +EL+ALLSGE D Y
Sbjct: 68 IGKVEQELEDDIGMIELGEAEGDEGVVKEAEAALKSLKKEVARRELEALLSGEADGFDSY 127
Query: 208 IEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAF 267
+EV AGAGGTES DWA M+L+MY WA+ G++V +++E GE AGIK ATI+V G A+
Sbjct: 128 LEVHAGAGGTESQDWAQMLLRMYSRWAETHGFKVEVLEESEGEEAGIKSATIQVSGHNAY 187
Query: 268 GYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGG 327
G+ K E GVHRLVRISPFDS RRHTSF++VAV P D + + I ESD+R++ RSGG
Sbjct: 188 GWLKTEAGVHRLVRISPFDSNARRHTSFSSVAVFPVI-DDTIKIDIKESDVRVDTMRSGG 246
Query: 328 AGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNA 387
AGGQH N T+SAVR+ HIPTG+ CQ RSQH+NKA A +L++R+ Q+E+ R+ + A
Sbjct: 247 AGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNKAQAWDMLRARLYQIELKRREEKAA 306
Query: 388 EHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
+ TDI WG+QIR+YVL PY+MVKDLRT + SD VL GDLD F+ + L+
Sbjct: 307 ADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLGGDLDDFMAATLA 361
>gi|326387471|ref|ZP_08209080.1| peptide chain release factor 2 [Novosphingobium nitrogenifigens DSM
19370]
gi|326208127|gb|EGD58935.1| peptide chain release factor 2 [Novosphingobium nitrogenifigens DSM
19370]
Length = 375
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 165/357 (46%), Positives = 234/357 (65%), Gaps = 1/357 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
++H I ++ +I+K L W RL+ L A + P LWDDP A + RE L +
Sbjct: 6 QAHIDRIEGALALIRKFLDWDRAVRRLHELDARVEDPKLWDDPKQAEAVMRERRRLDAAI 65
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
VK QE+ + I+ ++L E D + E L L + ++ ++ ALL+GE D +
Sbjct: 66 GTVKQIGQEMADAIEFVELGEMEGDEDTVAEGLATLAALAERADADKVQALLAGEADANN 125
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
++EV AGAGGTES DWA M+ +MY WA+R GY+V L+D GE AGIK T+ + GE
Sbjct: 126 AFLEVHAGAGGTESQDWAEMLQRMYTRWAERHGYKVELVDYHAGEAAGIKGCTLLIKGEN 185
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
A+GYAK E GVHRLVRISP+DS RRHTSF++V V P D + ++IN +DL+++ +R+
Sbjct: 186 AYGYAKTESGVHRLVRISPYDSSARRHTSFSSVWVYPEI-DDNIDIEINPADLKVDTYRA 244
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQM 385
GAGGQH NTTDSAVRI H+PTGI QN+RSQH+N+A+AMG+L++R+ + E+A++
Sbjct: 245 SGAGGQHVNTTDSAVRITHVPTGIIVASQNDRSQHKNRATAMGMLRARLYEAELAKREAA 304
Query: 386 NAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
+ + T+I WG+QIR+YVL PY+ VKDLRT ++P VL+G LD F+ + LS
Sbjct: 305 ASGEYAAKTEIGWGHQIRSYVLQPYQQVKDLRTGVVSTNPTEVLDGALDPFMAAALS 361
>gi|148556746|ref|YP_001264328.1| peptide chain release factor 2 [Sphingomonas wittichii RW1]
gi|148501936|gb|ABQ70190.1| bacterial peptide chain release factor 2 (bRF-2) [Sphingomonas
wittichii RW1]
Length = 375
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 175/352 (49%), Positives = 240/352 (68%), Gaps = 3/352 (0%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
I Q++ ++++ L W RL+ L+ + P LWDD A + RE L + VKA
Sbjct: 12 INQAMALVRRFLDWDRALRRLDELNNRVEDPKLWDDAKAAQEVMRERRRLDEAVSAVKAI 71
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
EQE + I++I+LA E+DT L + ++AL + ++++ ++ ALL+GE D + YIEV
Sbjct: 72 EQERDDTIELIELAEAEDDTALVDDGVQALAALAERAEKDKIGALLAGEADANNTYIEVN 131
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
+GAGGTES DWA M+ +MY WA+R GY+V L+D GE AGIK AT+ V GE A+GYAK
Sbjct: 132 SGAGGTESQDWAGMLQRMYARWAERHGYKVELIDFHAGEQAGIKSATLLVRGENAYGYAK 191
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
E GVHRLVRISP+DS RRHTSFA+V V P D +++ E DL+I+ +RS GAGGQ
Sbjct: 192 TESGVHRLVRISPYDSAARRHTSFASVWVYPEV-DDDIDIEVLEKDLKIDTYRSSGAGGQ 250
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI-ARQAQMNAEHT 390
H NTTDSAVRI H+PTGI CQN+RSQH+N+A AM L++R+ + E+ R+A+ A +
Sbjct: 251 HVNTTDSAVRITHVPTGIIVACQNQRSQHKNRAEAMKQLKARLYEQELQKREAEAMAGYA 310
Query: 391 QSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
+ T+I WG+QIR+YVL PY+MVKDLRT + P VL+GDLD F+ + LS
Sbjct: 311 -AKTEIGWGHQIRSYVLQPYQMVKDLRTGTTSTAPSDVLDGDLDRFMAAALS 361
>gi|397676886|ref|YP_006518424.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis
ATCC 29191]
gi|395397575|gb|AFN56902.1| Peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis
ATCC 29191]
Length = 375
Score = 334 bits (857), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 173/358 (48%), Positives = 245/358 (68%), Gaps = 3/358 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
++H I +S+ ++++ L W RL+ L+A + P+LWDD A + RE G L +
Sbjct: 6 QAHVDHIQESLALLRRFLDWDRALRRLDELNARVEDPSLWDDARAAQEVMRERGRLDESI 65
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
+A EL E+I++I++A E + + +++ AL T+ ++ ++ ALLSGE D
Sbjct: 66 AATRAIATELQENIELIEMAEAEGEEGMVQDAISALETLAERADRDKVKALLSGEADGND 125
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
YIEV AGAGGTES DWA M+ +MY+ WA+R+G++V L+D GE AGIK AT+ V GE
Sbjct: 126 TYIEVNAGAGGTESQDWAEMLSRMYQRWAERQGFKVELVDYHAGEQAGIKSATLLVKGES 185
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
A+GYAK E GVHRLVRISPFDS RRHTSFA+VAV P D +++ + DL+I+ +RS
Sbjct: 186 AYGYAKTENGVHRLVRISPFDSNARRHTSFASVAVYPVV-DDDIDIEVLDKDLKIDTYRS 244
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIA-RQAQ 384
GAGGQH NTTDSAVRI HIPTGI CQN+RSQH+N+A AM L++R+ + E+ R+A+
Sbjct: 245 SGAGGQHVNTTDSAVRITHIPTGIVVACQNQRSQHKNRAEAMKQLKARLYERELQIREAE 304
Query: 385 MNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
+A + + ++I WG+QIR+YVL PY++VKDLRT + P VL+G+LD FI + L+
Sbjct: 305 ASAGYA-AKSEIGWGHQIRSYVLQPYQLVKDLRTGITSTAPADVLDGNLDAFIAAALA 361
>gi|94495879|ref|ZP_01302458.1| protein chain release factor B [Sphingomonas sp. SKA58]
gi|94424571|gb|EAT09593.1| protein chain release factor B [Sphingomonas sp. SKA58]
Length = 377
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 162/351 (46%), Positives = 235/351 (66%), Gaps = 1/351 (0%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
I ++ ++++ L W RL+ L+A + P LWD+ A + RE L + +A
Sbjct: 14 IDAALALLRQSLDWDRALRRLDELNARVEDPTLWDNAKQAQEVMRERTRLDSAIGATRAI 73
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
E E + ++I++A E D + E++ AL + ++ E ++ ALL+GE D Y+E+
Sbjct: 74 EAEKSDTAELIEMAEAEGDEGMVDEAVAALKALADRADEDKIKALLAGEADSYDTYLEIH 133
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AGAGGTES DWA M+ +MY+ WA+RRGY+V L+D G+ AGIK AT + GE A+GYAK
Sbjct: 134 AGAGGTESQDWAEMLSRMYRRWAERRGYKVELVDYQAGDQAGIKSATFLMKGENAYGYAK 193
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
E GVHRLVRISP+DS RRHTSF++V V P D +++ ESDL+I+ +R+ GAGGQ
Sbjct: 194 TESGVHRLVRISPYDSSARRHTSFSSVWVYPVI-DDDIDIEVKESDLKIDTYRASGAGGQ 252
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQ 391
H NTTDSAVRI H+P+GI QN+RSQH+N+A+AM +L++R+ + E+ R+ + + Q
Sbjct: 253 HVNTTDSAVRITHVPSGIIVASQNDRSQHKNRATAMNMLKARLYEAELRRREEAASSDYQ 312
Query: 392 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
+ T+I WG+QIR+YVL PY++VKDLRT + PD VL+G LD F+ + LS
Sbjct: 313 AKTEIGWGHQIRSYVLQPYQLVKDLRTGVTSTSPDDVLDGALDPFMAAALS 363
>gi|294084599|ref|YP_003551357.1| protein chain release factor B [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292664172|gb|ADE39273.1| Protein chain release factor B [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 369
Score = 334 bits (856), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 158/354 (44%), Positives = 243/354 (68%), Gaps = 1/354 (0%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
I+ ++++++K + ++ RLN L A+ P+ W+D A + RE L ++ +K
Sbjct: 12 ISSTLELLRKHVNFEVAVARLNDLEAQTTMPDFWNDQAVAQDVMREKNRLERQINLIKDM 71
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
+ E+ + + +I+L E D ++ E+ L + ++ +++L++LLSGE D C++E+
Sbjct: 72 QAEMDDCVALIELGIAEGDDDVVAEAEAVLTKLVTEADKRQLESLLSGEADANDCFLEIH 131
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AGAGGTE+ DWA M+++MY W ++RGY+V L++E GE AGIK T+++DGE A+G+ K
Sbjct: 132 AGAGGTEAQDWAQMLVRMYGRWCEQRGYKVHLIEESAGEEAGIKSVTMRIDGENAYGWLK 191
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
E GVHRLVRISP+DS RRHTSFA+ V P D + +++ + DLRI+ +R+ GAGGQ
Sbjct: 192 TESGVHRLVRISPYDSSARRHTSFASAWVYP-VVDDNIEIEVEDKDLRIDTYRASGAGGQ 250
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQ 391
H N TDSA+RI H+PT I CQN+RSQH+N+A+A +L++R+ +LE+ ++ + ++
Sbjct: 251 HVNKTDSAIRITHLPTNIVVQCQNDRSQHRNRATAFNMLKARLYELELQKREEAASDAAA 310
Query: 392 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
S TDI WGNQIR+YVLHPY+MVKDLRTN E + VL+GDLD FI + L+A +
Sbjct: 311 SKTDIGWGNQIRSYVLHPYQMVKDLRTNVEKGNAQGVLDGDLDSFIEASLAARV 364
>gi|85702878|ref|ZP_01033982.1| peptide chain release factor 2 [Roseovarius sp. 217]
gi|85671806|gb|EAQ26663.1| peptide chain release factor 2 [Roseovarius sp. 217]
Length = 375
Score = 333 bits (855), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 174/357 (48%), Positives = 241/357 (67%), Gaps = 4/357 (1%)
Query: 90 AAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVK 149
A I +S++++++RL W+ RL +A + P LWDDP A + RE +L+ +
Sbjct: 10 AEIEKSLELLRQRLGWETARHRLEEFNARVEDPTLWDDPARAQSLMRERQALVDALDTHD 69
Query: 150 AFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIE 209
+ +QEL +++ +I+L ENDTE+ E+ A+ + + + KEL+ALL GE D ++E
Sbjct: 70 SLKQELEDNLGLIELGEMENDTEVVSEAEAAIKALAKVAAAKELEALLDGEADSNDTFLE 129
Query: 210 VQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGY 269
+ AGAGGTES DWASM+ +MY WA++RGY V L E GE AGIK A K+ G A+G+
Sbjct: 130 INAGAGGTESCDWASMLARMYVRWAEKRGYTVELQSESAGEEAGIKSAAYKISGHNAYGW 189
Query: 270 AKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAG 329
K+E GVHRLVRISPFDS +RHTSF++V V P D + +++N SD+RI+ +RS GAG
Sbjct: 190 LKSESGVHRLVRISPFDSAAKRHTSFSSVWVYPVV-DDNIEIEVNPSDIRIDTYRSSGAG 248
Query: 330 GQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ-AQMNAE 388
GQH NTTDSAVRI HIPTGI T +++SQHQN+ AM L+SR+ Q E+ R+ A +N
Sbjct: 249 GQHVNTTDSAVRITHIPTGIVVTS-SQKSQHQNRDIAMKALKSRLYQQELDRRNAAINEA 307
Query: 389 HTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
H + D WGNQIR+YVL PY+MVKDLRT E SD VL+GDLD F+ + L+ ++
Sbjct: 308 H-DAKGDAGWGNQIRSYVLQPYQMVKDLRTGVETSDTKGVLDGDLDEFMAATLAMNV 363
>gi|430003273|emb|CCF19058.1| Peptide chain release factor 2 (RF-2) [Rhizobium sp.]
Length = 342
Score = 333 bits (855), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 161/321 (50%), Positives = 227/321 (70%), Gaps = 1/321 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
PNLW+D A ++ RE L + V+A EQ+L ++I++I++ EE D + ++ +AL
Sbjct: 8 PNLWNDASEAQKLMRERQQLDDSISGVRALEQQLSDNIELIEMGEEEGDEAIVKDAEDAL 67
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
+R ++ ++++A+LSGE D Y+EV +GAGGTES DWA+M+L+MY WA+R+GY+V
Sbjct: 68 KALRTEANRRQVEAMLSGEADSNDTYVEVHSGAGGTESQDWANMLLRMYIRWAERQGYKV 127
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
+++ GE AGIK ATI V G A+G+ K E GVHRLVRISP+DS RRHTSF+++ V
Sbjct: 128 EVLEVHEGEEAGIKSATILVKGHNAYGWMKTESGVHRLVRISPYDSNARRHTSFSSIWVY 187
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D S ++++NESD RI+ +RS GAGGQH NTTDSAVRI HIPTGI CQ ERSQH+
Sbjct: 188 P-VIDDSINIEVNESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVACQQERSQHK 246
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
N+A A +L++R+ + E+ ++ + S TDI WG+QIR+YVL PY++VKDLRT E
Sbjct: 247 NRAKAWDMLRARLYEAELKKREEAANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVE 306
Query: 422 VSDPDSVLEGDLDGFILSYLS 442
S PD VL GDL+ F+ + L+
Sbjct: 307 SSAPDDVLNGDLNEFMEAALA 327
>gi|349701070|ref|ZP_08902699.1| peptide chain release factor 2 [Gluconacetobacter europaeus LMG
18494]
Length = 333
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 155/314 (49%), Positives = 227/314 (72%), Gaps = 1/314 (0%)
Query: 124 LWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLT 183
+W+D A ++ RE L +++ V+ E ++ + I++++LA E D+ + E+L +L
Sbjct: 1 MWNDSEAAQKLMRERTLLANQIEGVQRLEADVNDTIELVELAEMEGDSAVVAEALSSLRA 60
Query: 184 MRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTL 243
+ ++K +E ++LLSGE D CY+EV AGAGGTE+ DWA M+L+MY WA++ GY+VT+
Sbjct: 61 LAEEAKRRETESLLSGEADSNDCYLEVNAGAGGTEAQDWAEMLLRMYTRWAEQHGYKVTM 120
Query: 244 MDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPN 303
M+ GE AGIK ATI+V G A+G+ K E GVHRLVRISPFD+ RR TSFA+V V P
Sbjct: 121 MESSEGEQAGIKSATIQVSGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPV 180
Query: 304 SGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNK 363
D S ++INE+DLR++ FR+ GAGGQH N T+SA+RI HIPTGI CQ +RSQH+N+
Sbjct: 181 V-DDSIEIEINEADLRVDTFRASGAGGQHVNKTESAIRITHIPTGIVVACQTDRSQHRNR 239
Query: 364 ASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVS 423
A+AM +L++R+ + E+ ++ A+ + TDI WG+QIR+YVL PY++VKDLRTN E +
Sbjct: 240 ATAMTMLKARMYEQELQKREAAAAQTEANKTDIGWGHQIRSYVLAPYQLVKDLRTNVEKT 299
Query: 424 DPDSVLEGDLDGFI 437
+PD++L+GD+D F+
Sbjct: 300 NPDAILDGDIDDFM 313
>gi|319783261|ref|YP_004142737.1| hypothetical protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317169149|gb|ADV12687.1| hypothetical protein Mesci_3567 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 376
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 172/361 (47%), Positives = 242/361 (67%), Gaps = 6/361 (1%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
I Q+I ++++ W RL L+ +LW++P+ A ++ RE SL + VK
Sbjct: 12 IRQAITLLRRHFDWDQAIKRLEYLNVRAEDASLWNEPLEAQKLMRERQSLEEGIASVKGL 71
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
Q L ++I +I+L EE D + E+ A+ +M+ ++K ++++ LLSGE D Y+E+
Sbjct: 72 TQALEDNIGLIELGEEERDEGVIAEAEAAIRSMQGEAKARQVETLLSGEADSNDTYLEIH 131
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AGAGGTES DWASM+L+MY WA+RR ++V +++ GE AGIK AT+ + G A+G+ K
Sbjct: 132 AGAGGTESQDWASMLLRMYTRWAERRRFKVEVLEMHDGEEAGIKSATLMIKGHNAYGWMK 191
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
E GVHRLVRISP+DS RRHTSFA+V V P D + + ++ESD+RI+ +RS G+GGQ
Sbjct: 192 TESGVHRLVRISPYDSNARRHTSFASVWVYPVI-DDTIEIDVSESDVRIDTYRSSGSGGQ 250
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI-ARQAQMNAEHT 390
H NTTDSAVRI H+ TGI CQ ERSQH+NKA A +L+SR+ + E+ R+A NA
Sbjct: 251 HVNTTDSAVRITHLATGIAVACQAERSQHKNKAKAWEMLRSRLYEEELKKREAVANATEA 310
Query: 391 QSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKDEG 450
S +DI WG+QIR+YVL PY++VKDLRT E + P SVL+GDLD F+ + LS + EG
Sbjct: 311 -SKSDIGWGHQIRSYVLQPYQLVKDLRTGVESTSPSSVLDGDLDDFMEASLSQRI---EG 366
Query: 451 G 451
G
Sbjct: 367 G 367
>gi|365858936|ref|ZP_09398829.1| peptide chain release factor 2 [Acetobacteraceae bacterium AT-5844]
gi|363713344|gb|EHL96973.1| peptide chain release factor 2 [Acetobacteraceae bacterium AT-5844]
Length = 376
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 163/354 (46%), Positives = 237/354 (66%), Gaps = 1/354 (0%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
I SI ++++ L W RL+ ++A P LW+ P A + RE G L +++ V+
Sbjct: 12 IQDSIALLRRHLDWDVALRRLDEVNARAEDPTLWERPDEAQAVMRERGRLADQIEGVQKL 71
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
EQ + + I++I++A E DTE ++ L ++K +E+++LLSGE D ++EV
Sbjct: 72 EQNVRDAIELIEMAEAEGDTETVEAAVADLKEFAAEAKRREIESLLSGEADQRDAFLEVN 131
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AGAGGTE+ DWA M+L+MY WA++RG +V L +E GE AGIK ATI+V G A+G+ K
Sbjct: 132 AGAGGTEAQDWAQMLLRMYTRWAEKRGLKVQLTEESEGEQAGIKSATIQVSGPNAYGWLK 191
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
E GVHRLVRISPFD+ RR TSFA+V V P D ++IN +DL+ + FR+ GAGGQ
Sbjct: 192 TESGVHRLVRISPFDAAARRQTSFASVYVFPVI-DDKIEIEINPADLKTDTFRASGAGGQ 250
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQ 391
H N T+S VR HIPTGI A +RSQH+N+ AM +L++R+ +LE+ ++ +++A
Sbjct: 251 HVNKTESGVRFTHIPTGIVAASTQDRSQHRNRVIAMDMLKARLYELELRKREEVSAATEA 310
Query: 392 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
TDI WG+QIR+YVL PY++VKDLRTN E +PD+VL+GDLD F+ + L++ +
Sbjct: 311 GKTDIGWGHQIRSYVLAPYQLVKDLRTNVEKGNPDAVLDGDLDDFMAAALASRV 364
>gi|217976907|ref|YP_002361054.1| hypothetical protein Msil_0721 [Methylocella silvestris BL2]
gi|217502283|gb|ACK49692.1| conserved hypothetical protein [Methylocella silvestris BL2]
Length = 376
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 168/353 (47%), Positives = 238/353 (67%), Gaps = 3/353 (0%)
Query: 91 AIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKA 150
+I QS+ ++++ L RL L+A++ PNLWDD A +I RE L ++ +
Sbjct: 11 SIKQSMGLLRRHLDVATAERRLAELNAKVEDPNLWDDADAAQKIMRERTDLEDRLGSLAR 70
Query: 151 FEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEV 210
F+ EL + + +++LA E DT E E++ L +++ +++ ++++ALLSGE+D YIEV
Sbjct: 71 FDSELDDAVTLVELAEAEEDTATEKEAIGQLKSLKLEAERRQIEALLSGEVDGNDTYIEV 130
Query: 211 QAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYA 270
+GAGGTES DWA M+ +MY WA+R ++V +++E G+ AG+K T+ V G A G+A
Sbjct: 131 HSGAGGTESCDWARMLFRMYARWAERHKFKVEVIEETAGDEAGLKSGTLLVKGHNAHGWA 190
Query: 271 KAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGG 330
K E GVHRLVRISPFDS RRHTSFA+V V P D + + ESD RI+ +RS GAGG
Sbjct: 191 KTESGVHRLVRISPFDSNARRHTSFASVWVYPVI-DDKIDIDVKESDCRIDTYRSSGAGG 249
Query: 331 QHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI-ARQAQMNAEH 389
QH NTTDSAVRI HIP+GI CQ ERSQH+N+A+A +L++R+ + EI R+A NA
Sbjct: 250 QHVNTTDSAVRITHIPSGIVVACQGERSQHKNRATAWNMLRARLYEQEIEKREAAANATE 309
Query: 390 TQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
S T+I WG+QIR+YVL PY++VKDLR+ PD VL+GDLD F+ + L+
Sbjct: 310 A-SKTEIGWGHQIRSYVLQPYQLVKDLRSGVTSGTPDDVLDGDLDSFMEAALA 361
>gi|339503157|ref|YP_004690577.1| peptide chain release factor 2 [Roseobacter litoralis Och 149]
gi|338757150|gb|AEI93614.1| peptide chain release factor 2 [Roseobacter litoralis Och 149]
Length = 374
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 169/352 (48%), Positives = 238/352 (67%), Gaps = 4/352 (1%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
I +S+ ++ +RL + RL +A + P LWDDP A ++ R+ L+ M
Sbjct: 12 IQKSLDLLAQRLDVETAPYRLEEFNARVEDPTLWDDPDAAQKLMRDRQMLVDAMATHDNI 71
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
+QE+ ++I++I+L E+D ++ ++ AL + + +KEL+ALL GE D ++EV
Sbjct: 72 KQEMADNIELIELGEMEDDADVITDAENALRALEETAAKKELEALLDGEADSNDTFLEVN 131
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AGAGGTES DWA+M+ +MY WA+++GY+V L G+ AGIK AT K+ G A+G+ K
Sbjct: 132 AGAGGTESCDWANMLARMYVRWAEKKGYKVELQSMSDGDEAGIKSATYKITGLNAYGWLK 191
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
+E GVHRLVRISPFDS +RHTSF++V V P D + + +N SD+RI+ +RS GAGGQ
Sbjct: 192 SESGVHRLVRISPFDSAAKRHTSFSSVWVYP-VVDDNIDIDVNPSDIRIDTYRSSGAGGQ 250
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ-AQMNAEHT 390
H NTTDSAVRI H PTGI T +E+SQHQN+ AM L+SR+ Q+E+ R+ A +N H
Sbjct: 251 HVNTTDSAVRITHHPTGIVVTS-SEKSQHQNRDIAMKALKSRLYQMELDRRNAAINEAH- 308
Query: 391 QSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
++ D WGNQIR+YVL PY+MVKDLRTN+E SD VL+GDLDGF+ + L+
Sbjct: 309 ENKGDAGWGNQIRSYVLQPYQMVKDLRTNFETSDTKGVLDGDLDGFMAATLA 360
>gi|225851497|ref|YP_002731731.1| peptide chain release factor 2 [Persephonella marina EX-H1]
gi|225646418|gb|ACO04604.1| peptide chain release factor 2 [Persephonella marina EX-H1]
Length = 370
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 164/358 (45%), Positives = 236/358 (65%), Gaps = 1/358 (0%)
Query: 84 DWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
++K + IK+ L ++L L L E+ +P+ W+D A IS + ++
Sbjct: 4 EFKEKLEQLENKFNNIKEILDPESLRGELFKLDQEMGRPDFWNDTKKAQEISSKRNAIAN 63
Query: 144 KMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDP 203
K++E+++ E+++ + + I+L E D E E E + + ++ + E +LLS E D
Sbjct: 64 KIQEIESVEKKINDIKEFIELLELEYDKETEDEIKREIEALDKEITKLETASLLSEEYDM 123
Query: 204 CSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDG 263
+ + +QAG+GG E+ DW M+L+MY WA++ G+ V ++D P ++AGIK AT V G
Sbjct: 124 KNAIVTLQAGSGGVEACDWTEMLLRMYLRWAEKNGFDVEMVDYQPDDVAGIKSATFIVKG 183
Query: 264 EYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERF 323
YA+GY K E GVHRLVRISPFD+ KRRHTSF+AV+VIP GD V+I E DLRI+ F
Sbjct: 184 PYAYGYLKGEQGVHRLVRISPFDANKRRHTSFSAVSVIPEIGD-EVKVEIKEEDLRIDTF 242
Query: 324 RSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQA 383
R+ GAGGQH NTTDSAVRI+HIPTGIT +CQ+ERSQ QN+A A+ +L++++ Q E+ +Q
Sbjct: 243 RASGAGGQHVNTTDSAVRIVHIPTGITVSCQSERSQIQNRAKALQMLKAKLYQYELEKQK 302
Query: 384 QMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
+ E DISWG+QIR+YV PY+MVKDLRT YE + +V++GD+D FI SYL
Sbjct: 303 EKQKELEGEKKDISWGSQIRSYVFQPYQMVKDLRTGYETGNIQAVMDGDIDPFIESYL 360
>gi|296533603|ref|ZP_06896168.1| peptide chain release factor RF2 [Roseomonas cervicalis ATCC 49957]
gi|296266065|gb|EFH12125.1| peptide chain release factor RF2 [Roseomonas cervicalis ATCC 49957]
Length = 376
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 162/354 (45%), Positives = 238/354 (67%), Gaps = 1/354 (0%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
I SI ++++ L W RL+ ++A P LW+ P A + RE L +++ VK
Sbjct: 12 IEDSIALLRRHLDWDVALRRLDEVNARAEDPTLWEKPDEAQAVMRERNRLADQVEGVKKL 71
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
EQ++ + +++I+LA E D ++ L + ++K +E+++LLSGE D C++EV
Sbjct: 72 EQDVKDALELIELAEAEGDGATADAAIADLHSFAAEAKRREIESLLSGEADMRDCFVEVN 131
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AGAGGTE+ DWA M+L+MY+ WA++RGY+V L +E GE AGIK ATI+V G A+G+ K
Sbjct: 132 AGAGGTEAQDWAQMLLRMYQRWAEKRGYKVQLTEESEGEQAGIKSATIQVTGPNAYGWLK 191
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
E GVHRLVRISPFD+ RR TSFA+V V P D ++IN +DL+ + FR+ GAGGQ
Sbjct: 192 TESGVHRLVRISPFDAAARRQTSFASVYVFPVI-DDKIEIEINPADLKTDTFRASGAGGQ 250
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQ 391
H N T+S VR HIPTGI A +RSQH+N+ AM +L++R+ +LE+ ++ ++ A
Sbjct: 251 HVNKTESGVRFTHIPTGIVAASTQDRSQHRNRVIAMEMLKARLYELELRKREEITAGIEA 310
Query: 392 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
TDI WG+QIR+YVL PY++VKDLRTN E +PD+VL+G+LD F+ + L++ +
Sbjct: 311 GKTDIGWGHQIRSYVLAPYQLVKDLRTNVEKGNPDAVLDGELDDFMAAALASRV 364
>gi|56551094|ref|YP_161933.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis
ZM4]
gi|260753249|ref|YP_003226142.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|384411569|ref|YP_005620934.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|56542668|gb|AAV88822.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis
ZM4]
gi|258552612|gb|ACV75558.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|335931943|gb|AEH62483.1| peptide chain release factor 2 [Zymomonas mobilis subsp. mobilis
ATCC 10988]
Length = 375
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 172/358 (48%), Positives = 246/358 (68%), Gaps = 3/358 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
++H I +S+ ++++ L W RL+ L+A + P+LWDD A + RE G L +
Sbjct: 6 QAHVDHIQESLALLRRFLDWDRALRRLDELNARVEDPSLWDDARAAQEVMRERGRLDESI 65
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
+A EL E+I++I++A E + E+ +++ AL ++ ++ ++ ALLSGE D
Sbjct: 66 AATRAIATELQENIELIEMAEAEGEEEMVQDAISALESLAERADRDKVKALLSGEADGND 125
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
YIEV AGAGGTES DWA M+ +MY+ WA+R+G++V L+D GE AGIK AT+ V GE
Sbjct: 126 TYIEVNAGAGGTESQDWAEMLSRMYQRWAERQGFKVELVDYHAGEQAGIKSATLLVKGES 185
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
A+GYAK E GVHRLVRISPFDS RRHTSFA+VAV P D +++ + DL+I+ +RS
Sbjct: 186 AYGYAKTENGVHRLVRISPFDSNARRHTSFASVAVYPVV-DDDIDIEVLDKDLKIDTYRS 244
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIA-RQAQ 384
GAGGQH NTTDSAVRI H+PTGI CQN+RSQH+N+A AM L++R+ + E+ R+A+
Sbjct: 245 SGAGGQHVNTTDSAVRITHMPTGIVVACQNQRSQHKNRAEAMKQLKARLYERELQIREAE 304
Query: 385 MNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
+A + + ++I WG+QIR+YVL PY++VKDLRT + P VL+G+LD FI + L+
Sbjct: 305 ASAGYA-AKSEIGWGHQIRSYVLQPYQLVKDLRTGITSTAPADVLDGNLDAFIAAALA 361
>gi|349687350|ref|ZP_08898492.1| peptide chain release factor 2 [Gluconacetobacter oboediens 174Bp2]
Length = 333
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 154/314 (49%), Positives = 227/314 (72%), Gaps = 1/314 (0%)
Query: 124 LWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLT 183
+W+D A ++ RE L +++ V+ E ++ + +++++LA E D+ + E+L +L
Sbjct: 1 MWNDSEAAQKLMRERTLLASQIEGVQRLEADVNDTLELVELAEMEGDSAVVAEALASLRA 60
Query: 184 MRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTL 243
+ ++K +E ++LLSGE D CY+EV AGAGGTE+ DWA M+L+MY WA++ GY+VT+
Sbjct: 61 LAEEAKRRETESLLSGEADSNDCYLEVNAGAGGTEAQDWAEMLLRMYTRWAEQHGYKVTM 120
Query: 244 MDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPN 303
++ GE AGIK ATI+V G A+G+ K E GVHRLVRISPFD+ RR TSFA+V V P
Sbjct: 121 LESSEGEQAGIKSATIQVSGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPV 180
Query: 304 SGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNK 363
D S ++INE+DLR++ FR+ GAGGQH N T+SA+RI HIPTGI CQ +RSQH+N+
Sbjct: 181 V-DDSIEIEINEADLRVDTFRASGAGGQHVNKTESAIRITHIPTGIVVACQTDRSQHRNR 239
Query: 364 ASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVS 423
A+AM +L++R+ + E+ ++ A+ + TDI WG+QIR+YVL PY++VKDLRTN E +
Sbjct: 240 ATAMTMLKARMYEQELQKREAAAAQTEANKTDIGWGHQIRSYVLAPYQLVKDLRTNVEKT 299
Query: 424 DPDSVLEGDLDGFI 437
+PD++L+GDLD F+
Sbjct: 300 NPDAILDGDLDDFM 313
>gi|407720270|ref|YP_006839932.1| peptide chain release factor 2 [Sinorhizobium meliloti Rm41]
gi|407318502|emb|CCM67106.1| Peptide chain release factor 2 [Sinorhizobium meliloti Rm41]
Length = 342
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 161/321 (50%), Positives = 228/321 (71%), Gaps = 1/321 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
P+LW+D A ++ RE L + ++ FEQ+L ++I++I+L +EE D+ + E+ EAL
Sbjct: 8 PSLWNDAAEAQKLMRERQQLDDGINGLRRFEQQLNDNIELIELGKEEGDSAIVAEAEEAL 67
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
+R ++ +K+++A+LSGE D Y+EV +GAGGTES DWA+M+L+MY WA+R+GY+V
Sbjct: 68 RQLRGEAAKKQVEAMLSGEADQNDTYLEVHSGAGGTESQDWANMLLRMYTRWAERQGYKV 127
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
LM+ GE AGIK AT+ V G A+G+ K E GVHRLVRISP+DS RRHTSF+++ V
Sbjct: 128 ELMEIQDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFSSIWVY 187
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D S + INESD RI+ +RS GAGGQH NTTDSAVRI H+P+GI CQ ERSQH+
Sbjct: 188 PVV-DESIQIDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHMPSGIVVQCQQERSQHK 246
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
N+A A +L++R+ + E+ ++ + S TDI WG+QIR+YVL PY++VKDLRT E
Sbjct: 247 NRAKAWDMLRARLYEAELKKREEAANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVE 306
Query: 422 VSDPDSVLEGDLDGFILSYLS 442
S P VL+G+L+ F+ + L+
Sbjct: 307 SSSPGDVLDGELNEFMEAALA 327
>gi|119384552|ref|YP_915608.1| peptide chain release factor 2 [Paracoccus denitrificans PD1222]
gi|119374319|gb|ABL69912.1| bacterial peptide chain release factor 2 (bRF-2) [Paracoccus
denitrificans PD1222]
Length = 402
Score = 331 bits (848), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 166/353 (47%), Positives = 243/353 (68%), Gaps = 4/353 (1%)
Query: 91 AIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKA 150
AI +S++++ +R+ W+ RL L+A + ++W D A ++ R+ L ++ +
Sbjct: 38 AIRKSLKLLGQRMDWETAPHRLEELNAMIEAGDIWSDQARAQKLMRDRQMLSDAVETYRR 97
Query: 151 FEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEV 210
E EL ++ ++I+L E D E+ ++ AL ++ + +KEL+ALL+GE D ++E+
Sbjct: 98 IESELKDNAELIELGEAEGDDEIVADAEAALKSLAELAAQKELEALLNGEADGNDTFLEI 157
Query: 211 QAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYA 270
AGAGGTES DWASM+ +MY WA+++GY V L+ E PGE AGI+ A K+ G A+G+
Sbjct: 158 NAGAGGTESADWASMLARMYVRWAEKKGYSVELLSETPGEEAGIRSAAYKISGPNAYGWL 217
Query: 271 KAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGG 330
K+E GVHRLVRISP+DS RRHTSF++V V P D + + I ++++RI+ +RS GAGG
Sbjct: 218 KSESGVHRLVRISPYDSAARRHTSFSSVWVYPVV-DDNIEITIPDNEIRIDTYRSSGAGG 276
Query: 331 QHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI-ARQAQMNAEH 389
QH NTTDSAVRI H+PTGI T +E+SQHQN+A+AM L++R+ QLE+ R A +NA+H
Sbjct: 277 QHVNTTDSAVRITHLPTGIVVTS-SEKSQHQNRANAMAALKARLYQLELDKRNAAINAQH 335
Query: 390 TQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
++ D WGNQIR+YVLHPY+MVKDLRT +E SD VL+G LD F+ + L+
Sbjct: 336 -EAKGDAGWGNQIRSYVLHPYQMVKDLRTGHETSDTQGVLDGALDAFMAATLA 387
>gi|334315869|ref|YP_004548488.1| peptide chain release factor 2 [Sinorhizobium meliloti AK83]
gi|384529041|ref|YP_005713129.1| Peptide chain release factor 2 [Sinorhizobium meliloti BL225C]
gi|333811217|gb|AEG03886.1| Peptide chain release factor 2 [Sinorhizobium meliloti BL225C]
gi|334094863|gb|AEG52874.1| Peptide chain release factor 2 [Sinorhizobium meliloti AK83]
Length = 376
Score = 330 bits (847), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 169/351 (48%), Positives = 243/351 (69%), Gaps = 1/351 (0%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
I Q+I ++++ L W RL+ L+ + P+LW+D A ++ RE L + ++ F
Sbjct: 12 IKQAISLLRRHLDWDQAVRRLDWLNNKAEDPSLWNDAAEAQKLMRERQQLDDGINGLRRF 71
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
EQ+L ++I++I+L EE D+ + E+ EAL +R ++ +K+++A+LSGE D Y+EV
Sbjct: 72 EQQLNDNIELIELGEEEGDSAIVAEAEEALRQLRGEAAKKQVEAMLSGEADQNDTYLEVH 131
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
+GAGGTES DWA+M+L+MY WA+R+GY+V LM+ GE AGIK AT+ V G A+G+ K
Sbjct: 132 SGAGGTESQDWANMLLRMYTRWAERQGYKVELMEIQDGEEAGIKSATLLVKGHNAYGWLK 191
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
E GVHRLVRISP+DS RRHTSF+++ V P D S + INESD RI+ +RS GAGGQ
Sbjct: 192 TESGVHRLVRISPYDSNARRHTSFSSIWVYPVV-DESIQIDINESDCRIDTYRSSGAGGQ 250
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQ 391
H NTTDSAVRI H+P+GI CQ ERSQH+N+A A +L++R+ + E+ ++ +
Sbjct: 251 HVNTTDSAVRITHMPSGIVVQCQQERSQHKNRAKAWDMLRARLYEAELKKREEAANAEAA 310
Query: 392 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
S TDI WG+QIR+YVL PY++VKDLRT E S P VL+G+L+ F+ + L+
Sbjct: 311 SKTDIGWGHQIRSYVLQPYQLVKDLRTGVESSSPGDVLDGELNEFMEAALA 361
>gi|300022372|ref|YP_003754983.1| hypothetical protein Hden_0845 [Hyphomicrobium denitrificans ATCC
51888]
gi|299524193|gb|ADJ22662.1| conserved hypothetical protein [Hyphomicrobium denitrificans ATCC
51888]
Length = 377
Score = 330 bits (846), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 168/355 (47%), Positives = 238/355 (67%), Gaps = 3/355 (0%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
I ++I ++++ L W+ RL L+A+ PNLW D +A ++ R+ +L +++ K
Sbjct: 12 IKEAIALLRRSLDWETAEDRLASLNAKAEDPNLWSDAKNAQKVMRQRQTLERSVEDFKRL 71
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
+++ + + +I+L E+D E AL + ++ + ++A+LSGE D S Y+EV
Sbjct: 72 QRDYDDALTLIELGEAESDEASVSEGEAALKRVDLEAHRRSVEAMLSGEADGMSTYVEVH 131
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AGAGGTES DWASM+ +MY W +RRGY+V L+DE PGE AGIK AT ++DG+ AFG+ K
Sbjct: 132 AGAGGTESQDWASMLARMYARWGERRGYKVKLIDESPGEEAGIKSATFEIDGDNAFGWLK 191
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
E GVHRLVRISPFDS RRHTSFA+V V P D + V IN +D+ I RS GAGGQ
Sbjct: 192 TEAGVHRLVRISPFDSNARRHTSFASVTVYPVI-DDTIEVDINPADVDISFARSSGAGGQ 250
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI-ARQAQMNAEHT 390
H N T+SAVR++H P+GI Q +RSQHQNK A L++R+ ++E+ R+A+ NAE
Sbjct: 251 HVNRTESAVRLVHKPSGIVIFAQEQRSQHQNKDIAFRRLKARLYEMELKKREAKANAEQA 310
Query: 391 QSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ TDI WG+QIR+YVL PY++VKDLRT + ++P VL+GD+D FI + LS L
Sbjct: 311 -AKTDIGWGHQIRSYVLQPYQLVKDLRTGAQSTNPSEVLDGDIDPFIEAALSQRL 364
>gi|15888668|ref|NP_354349.1| peptide chain release factor 2 [Agrobacterium fabrum str. C58]
gi|335035016|ref|ZP_08528359.1| peptide chain release factor 2 [Agrobacterium sp. ATCC 31749]
gi|15156400|gb|AAK87134.1| peptide chain release factor 2 [Agrobacterium fabrum str. C58]
gi|333793447|gb|EGL64801.1| peptide chain release factor 2 [Agrobacterium sp. ATCC 31749]
Length = 342
Score = 330 bits (846), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 160/321 (49%), Positives = 226/321 (70%), Gaps = 1/321 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
P LW+D A ++ RE L + VKA EQ+L ++I++I+L E D E+ ++ +AL
Sbjct: 8 PTLWNDASEAQKLMRERQQLDDSINGVKALEQQLKDNIELIELGEMEGDDEIVKDAEDAL 67
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
+R ++ ++++A+LSGE D Y+EV +GAGGTES DWA+M+L+MY WA+R+G++V
Sbjct: 68 KALRSEANRRQVEAMLSGEADSNDTYVEVHSGAGGTESQDWANMLLRMYTRWAERQGFKV 127
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
+++ G+ AGIK ATI V G AFG+ K E GVHRLVRISP+DS RRHTSF+++ V
Sbjct: 128 EVLEIHDGDEAGIKSATILVKGHNAFGWMKTESGVHRLVRISPYDSNARRHTSFSSIWVY 187
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D S + INESD RI+ +RS GAGGQH NTTDSAVRI HIPTGI CQ ERSQH+
Sbjct: 188 P-VVDDSIQIDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIAVACQQERSQHK 246
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
N+A A +L++R+ ++E+ ++ + S TDI WG+QIR+YVL PY++VKDLRT E
Sbjct: 247 NRAKAWDMLRARLYEVELQKREEAANAQAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVE 306
Query: 422 VSDPDSVLEGDLDGFILSYLS 442
+ P +VL+GDL+ F+ + L+
Sbjct: 307 STAPGNVLDGDLNEFMEAALA 327
>gi|346994068|ref|ZP_08862140.1| peptide chain release factor 2 [Ruegeria sp. TW15]
Length = 375
Score = 330 bits (846), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 170/354 (48%), Positives = 247/354 (69%), Gaps = 4/354 (1%)
Query: 90 AAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVK 149
A I +S++++ +R+ ++ RL +A + PNLWD+P +A ++ RE L+ ++ +
Sbjct: 10 AEIEKSLELLAQRMDYETAPHRLEEFNARVEDPNLWDNPENAQKLMRERQMLVDAIETYE 69
Query: 150 AFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIE 209
+ + +L ++I++I+L E D E+ ++ A+ +++ K+ +KEL+ALL GE D ++E
Sbjct: 70 SIKTDLSDNIELIELGEMEEDEEVVTDAENAIKSLQTKAAKKELEALLDGEADGNDTFLE 129
Query: 210 VQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGY 269
+ +GAGGTES DWASM+ +MY WA+++GY V L E GE AGIK A K+ G A+G+
Sbjct: 130 INSGAGGTESCDWASMLARMYVRWAEKKGYTVELQSETAGEEAGIKSAAYKITGHNAYGW 189
Query: 270 AKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAG 329
K+E GVHRLVRISPFDS +RHTSF++V V P D + +++N SD+RI+ +RS GAG
Sbjct: 190 LKSESGVHRLVRISPFDSAAKRHTSFSSVWVYP-VVDDNIEIEVNPSDIRIDTYRSSGAG 248
Query: 330 GQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ-AQMNAE 388
GQH NTTDSAVRI HIPTGI T +E+SQHQN+ AM L+SR+ Q E+ R+ A +NA
Sbjct: 249 GQHVNTTDSAVRITHIPTGIVVTS-SEKSQHQNRDIAMKALKSRLYQQELDRRNADINAA 307
Query: 389 HTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
H ++ D WGNQIR+YVL PY+MVKDLRTN+E SD VL+GDLD F+ + L+
Sbjct: 308 H-EAKGDAGWGNQIRSYVLQPYQMVKDLRTNHETSDTKGVLDGDLDEFMAATLA 360
>gi|114764683|ref|ZP_01443868.1| peptide chain release factor 2 [Pelagibaca bermudensis HTCC2601]
gi|114542883|gb|EAU45904.1| peptide chain release factor 2 [Pelagibaca bermudensis HTCC2601]
Length = 373
Score = 330 bits (846), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 169/352 (48%), Positives = 239/352 (67%), Gaps = 5/352 (1%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
I +S+ ++ +RL W+ RL +A + PNLWDDP A ++ R+ L+ M+ +
Sbjct: 12 IEKSLDLLGQRLDWETAPHRLEEFNARVEDPNLWDDPQAAQKLMRDRQFLVDAMETYTSI 71
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
+QEL +++++I+L E D E+ E+ AL + K+ +KEL+ALL GE D ++E+
Sbjct: 72 KQELSDNVELIELGEMEEDDEVVSEAEGALKALAEKAGQKELEALLDGEADGNDTFLEIN 131
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AGAGGTE+ DWA+M+ +MY WA++RGY V L E G AGIK K+ G A+G+ K
Sbjct: 132 AGAGGTEACDWAAMLQRMYVRWAEKRGYEVELQSEEAGAEAGIKSVAYKISGTNAYGWLK 191
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
+E GVHRLVRISPF G R TSFA+V V P D + + +N SD+R++ +RS GAGGQ
Sbjct: 192 SESGVHRLVRISPFGKGT-RETSFASVWVYPVV-DDNIEIDVNPSDIRVDTYRSSGAGGQ 249
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ-AQMNAEHT 390
H NTTDSAVRI H+PTGI T +E+SQHQN+ AM L+SR+ Q+E+ R+ A++NA+H
Sbjct: 250 HVNTTDSAVRITHMPTGIVVTS-SEKSQHQNRDIAMKALKSRLYQMELDRRNAEINAQH- 307
Query: 391 QSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
++ D WGNQIR+YVL PY+MVKDLRT++E SD VL+GDLD F+ + L+
Sbjct: 308 EAKGDAGWGNQIRSYVLQPYQMVKDLRTSHETSDTQGVLDGDLDPFMAATLA 359
>gi|149184652|ref|ZP_01862970.1| protein chain release factor B [Erythrobacter sp. SD-21]
gi|148831972|gb|EDL50405.1| protein chain release factor B [Erythrobacter sp. SD-21]
Length = 375
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 168/358 (46%), Positives = 238/358 (66%), Gaps = 3/358 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
++H I ++ ++++ L W+ RL+ L A + P LWDDP A I++E L +
Sbjct: 6 QAHIDRIEAALALVRQSLDWERALRRLDELDARVQDPTLWDDPKQAQAITQEQKRLETAI 65
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
V+ E E+ + ++ +++ E D ++ E L +L T+ ++ ++ ALLSGE D
Sbjct: 66 NTVREIESEMGDAMEFVEMGEAEGDDDVVNEGLTSLSTLADRADRDKVQALLSGEADGND 125
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
YIE+ AGAGGTES DWA M+ +MY WA+RRG++V ++ G+ AGIK AT+ + GE
Sbjct: 126 SYIEIHAGAGGTESQDWAEMLFRMYGRWAERRGFKVETVEYQAGDQAGIKSATLLLKGEN 185
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
A+GYAK E GVHRLVRISP+DS RRHTSF++V V P ++IN SDL+I+ +R+
Sbjct: 186 AYGYAKTESGVHRLVRISPYDSSARRHTSFSSVWVYPVID-DDIDIEINPSDLKIDTYRA 244
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIA-RQAQ 384
GAGGQH NTTDSAVRI H PTGI QN+RSQH+NKA+AM +L++R+ + E+A R+A
Sbjct: 245 SGAGGQHVNTTDSAVRITHQPTGIVVASQNDRSQHKNKATAMNMLKARLFEREMAEREAA 304
Query: 385 MNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
+ E+ Q +DI WG+QIR+YVL PY+MVKDLRT PD VL+G LD FI + L+
Sbjct: 305 ASGEY-QEKSDIGWGHQIRSYVLQPYQMVKDLRTGVTSPTPDDVLDGALDPFISAALA 361
>gi|330991179|ref|ZP_08315132.1| Peptide chain release factor 2 [Gluconacetobacter sp. SXCC-1]
gi|329761765|gb|EGG78256.1| Peptide chain release factor 2 [Gluconacetobacter sp. SXCC-1]
Length = 333
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 153/314 (48%), Positives = 226/314 (71%), Gaps = 1/314 (0%)
Query: 124 LWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLT 183
+W+D A ++ RE L +++ V+ E ++ + +++++LA E D+ + E++ L
Sbjct: 1 MWNDAEAAQKLMRERTLLANQIEGVQRLEADVNDTLELVELAEMEGDSAVVAEAVAGLRA 60
Query: 184 MRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTL 243
+ ++K +E ++LLSGE D CY+EV AGAGGTE+ DWA M+L+MY WA++ GY+VT+
Sbjct: 61 LAEEAKRRETESLLSGEADGNDCYLEVNAGAGGTEAQDWAEMLLRMYTRWAEQHGYKVTM 120
Query: 244 MDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPN 303
M+ GE AGIK ATI+V G A+G+ K E GVHRLVRISPFD+ RR TSFA+V V P
Sbjct: 121 MESSEGEQAGIKSATIQVSGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPV 180
Query: 304 SGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNK 363
D S ++INE+DLR++ FR+ GAGGQH N T+SA+RI HIPTGI CQ +RSQH+N+
Sbjct: 181 V-DDSIEIEINEADLRVDTFRASGAGGQHVNKTESAIRITHIPTGIVVACQTDRSQHRNR 239
Query: 364 ASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVS 423
A+AM +L++R+ + E+ ++ A+ + TDI WG+QIR+YVL PY++VKDLRTN E +
Sbjct: 240 ATAMTMLKARMYEQELQKREAAAAQTEANKTDIGWGHQIRSYVLAPYQLVKDLRTNVEKT 299
Query: 424 DPDSVLEGDLDGFI 437
+PD++L+GD+D F+
Sbjct: 300 NPDAILDGDIDDFM 313
>gi|325292702|ref|YP_004278566.1| peptide chain release factor 2 [Agrobacterium sp. H13-3]
gi|325060555|gb|ADY64246.1| peptide chain release factor 2 [Agrobacterium sp. H13-3]
Length = 342
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 160/321 (49%), Positives = 223/321 (69%), Gaps = 1/321 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
P LW+D A ++ RE L + VKA EQ+L +++++I+L E D E+ ++ +AL
Sbjct: 8 PTLWNDATEAQKLMRERQQLDDSINGVKALEQQLKDNVELIELGEMEGDDEIVKDAEDAL 67
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
+R ++ ++++A+LSGE D Y+EV +GAGGTES DWA+M+L+MY WA R G++V
Sbjct: 68 KALRSEANRRQVEAMLSGEADSNDTYLEVHSGAGGTESQDWANMLLRMYTRWADREGFKV 127
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
+++ GE AGIK ATI V G AFG+ K E GVHRLVRISP+DS RRHTSF++V V
Sbjct: 128 EVLEVHDGEEAGIKSATILVKGHNAFGWLKTESGVHRLVRISPYDSNARRHTSFSSVWVY 187
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D S + INESD RI+ +RS GAGGQH NTTDSAVRI HIPTGI CQ ERSQH+
Sbjct: 188 P-VVDDSIQIDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIAVACQQERSQHK 246
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
N+A A +L++R+ ++E+ ++ S TDI WG+QIR+YVL PY+++KDLRT E
Sbjct: 247 NRAKAWDMLRARLYEVELQKREDAANAQAASKTDIGWGHQIRSYVLQPYQLIKDLRTGVE 306
Query: 422 VSDPDSVLEGDLDGFILSYLS 442
+ P +VL+GDL+ F+ + L+
Sbjct: 307 STAPGNVLDGDLNQFMEAALA 327
>gi|254461473|ref|ZP_05074889.1| peptide chain release factor 2 [Rhodobacterales bacterium HTCC2083]
gi|206678062|gb|EDZ42549.1| peptide chain release factor 2 [Rhodobacteraceae bacterium
HTCC2083]
Length = 375
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 170/354 (48%), Positives = 244/354 (68%), Gaps = 2/354 (0%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
I +S++++++RL W RL +A + P+LW+DP A ++ +E +L+ M +
Sbjct: 12 IEKSLELLRQRLDWDTAEFRLEEFNARVEDPDLWNDPDAAQKLMQERQALVDAMGTYTSI 71
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
+QEL + ++MI+L E D ++ E+ EAL + + + KEL+ALL GE D ++E+
Sbjct: 72 KQELSDQVEMIELGEMEEDEDVVTEAEEALNALAKLAAAKELEALLDGEADSNDTFLEIN 131
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
+GAGGTES DWASM+ +MY WA++RGY+V L E GE AGIK A K+ G+ A+G+ K
Sbjct: 132 SGAGGTESCDWASMLARMYVRWAEKRGYKVELQSESAGEEAGIKSAAYKISGQNAYGWLK 191
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
+E GVHRLVRISPFDS +RHTSF +V V P D + +++N SD+RI+ +RS GAGGQ
Sbjct: 192 SESGVHRLVRISPFDSAAKRHTSFTSVKVYPVV-DDNIEIEVNPSDIRIDTYRSSGAGGQ 250
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQ 391
H NTTDSAVRI H PTGI T +E+SQHQN+ AM L+SR+ Q+E+ +++ + E +
Sbjct: 251 HVNTTDSAVRITHAPTGIVVTS-SEKSQHQNRDIAMKALKSRLYQIELDKRSALVNEAHE 309
Query: 392 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ D WGNQIR+YVL PY+MVKDLRTN+E SD VL+GDLDGF+ + L+ ++
Sbjct: 310 NAGDAGWGNQIRSYVLQPYQMVKDLRTNHETSDTKGVLDGDLDGFMGATLAMNV 363
>gi|146277893|ref|YP_001168052.1| peptide chain release factor 2 [Rhodobacter sphaeroides ATCC 17025]
gi|145556134|gb|ABP70747.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodobacter
sphaeroides ATCC 17025]
Length = 375
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 169/368 (45%), Positives = 245/368 (66%), Gaps = 8/368 (2%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
++H AI +S++++ +R+ + RL A + NLW+DP A ++ RE LM ++
Sbjct: 6 QNHVEAIKRSLELLGQRMDLETAPHRLEEFDAMIEDGNLWNDPARAQKLMRERQQLMDQL 65
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
+ + L +++++I+L E DTE+ E+ A+ T+ ++ KEL+ALL GE D
Sbjct: 66 STYRLIDTGLRDNVELIELGEAEGDTEIVTEAEAAIRTLVETARAKELEALLDGEADGND 125
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
++E+ AGAGGTES DWASM+ +MY WA+R+GY+V L E GE AGIK A K+ G
Sbjct: 126 TFLEINAGAGGTESCDWASMLARMYVRWAERKGYKVELQSESAGEEAGIKSAAYKISGPN 185
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
A+G+ K+E GVHRLVRISP+DS RRHTSF++V V P D + ++I +++RI+ +RS
Sbjct: 186 AYGWLKSESGVHRLVRISPYDSAARRHTSFSSVWVYPVV-DDNIEIEIPANEIRIDTYRS 244
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI-ARQAQ 384
GAGGQH NTTDSAVRI H+PT I T + +SQHQN+ +AM L++R+ Q+E+ R A
Sbjct: 245 SGAGGQHVNTTDSAVRITHLPTNIVVTS-SMKSQHQNREAAMNALKARLYQMELDKRNAA 303
Query: 385 MNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSAS 444
+NA+H ++ + WGNQIR+YVL PY+MVKDLRT E SD VL+GDLD F + A+
Sbjct: 304 INAQH-EAKGEAGWGNQIRSYVLQPYQMVKDLRTGVETSDTQGVLDGDLDRF----MQAT 358
Query: 445 LDKDEGGQ 452
L +D G+
Sbjct: 359 LAQDVAGK 366
>gi|347530025|ref|YP_004836773.1| peptide chain release factor 2 [Sphingobium sp. SYK-6]
gi|345138707|dbj|BAK68316.1| peptide chain release factor 2 [Sphingobium sp. SYK-6]
Length = 375
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 162/357 (45%), Positives = 240/357 (67%), Gaps = 1/357 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
++H I ++ ++++ L W RL+ L+A + P LWD+ A + RE L +
Sbjct: 6 EAHVDHIKAALDLLRRSLDWDRALRRLDELNARVEDPTLWDNQKMAQDVMRERTRLDSSI 65
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
+A EQE+ + +++I++A E D L E + L + ++ ++ ALL+GE D
Sbjct: 66 GATRAIEQEMTDTVELIEMAEAEGDNALVDEGIANLQALAARADRDKVAALLAGEADGND 125
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
Y+E+ AGAGGTES DWA M+L+MY+ WA++ GY+V +++ GE AGIK AT+ + GE
Sbjct: 126 TYLEIHAGAGGTESQDWAEMLLRMYQRWAEKHGYKVEMIEYQAGEQAGIKSATLLIKGEN 185
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
A+GYAK E GVHRLVRISP+DS RRHTSF++V V P D + ++I ESDL+I+ +R+
Sbjct: 186 AYGYAKTESGVHRLVRISPYDSSARRHTSFSSVWVYPVI-DDNIEIEIKESDLKIDTYRA 244
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQM 385
GAGGQH NTTDSAVRI H+P+GI QN+RSQH+N+A+AM +L++R+ + E+ R+ +
Sbjct: 245 SGAGGQHVNTTDSAVRITHVPSGIIVASQNDRSQHKNRATAMNMLKARLYEAELRRREEE 304
Query: 386 NAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
+ Q+ T+I WG+QIR+YVL PY++VKDLRT + P VL+GDLD F+ + LS
Sbjct: 305 ASSDYQAKTEIGWGHQIRSYVLQPYQLVKDLRTGVTSTAPGDVLDGDLDPFMAAALS 361
>gi|182677929|ref|YP_001832075.1| hypothetical protein Bind_0939 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182633812|gb|ACB94586.1| hypothetical protein Bind_0939 [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 376
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 168/356 (47%), Positives = 239/356 (67%), Gaps = 3/356 (0%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
I QS+ ++++ L RL L+A++ P+LW+D A +I RE L ++ +K F
Sbjct: 12 IKQSLGLLRRHLDVDTSTRRLEELNAKVENPDLWNDAEAAQKIMRERTELEERLGSIKQF 71
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
E +L + +I+LA E D E E ++ L ++ +++ ++++ALLSGE+D YIEV
Sbjct: 72 EGDLDDAATLIELAEAEGDEASEKEGIDLLKGLKIEAERRQIEALLSGEVDSNDTYIEVH 131
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
+GAGGTES DWA M+ +MY WA+R ++V +++E G+ AGIK AT+ V G A G+AK
Sbjct: 132 SGAGGTESCDWARMLFRMYARWAERHRFKVEIIEETAGDEAGIKSATLLVKGHNAHGWAK 191
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
E GVHRLVRISPFDS RRHTSFA+V V P D + + ESD RI+ +RS GAGGQ
Sbjct: 192 TESGVHRLVRISPFDSNARRHTSFASVWVYPVI-DDKIEIDVKESDCRIDTYRSSGAGGQ 250
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIA-RQAQMNAEHT 390
H NTTDSAVRI HIP+GI CQ ERSQH+N+A+A +L++R+ + E+ R+A+ NA
Sbjct: 251 HINTTDSAVRITHIPSGIVVACQGERSQHKNRATAWNMLRARLYEKELERREAEANATEA 310
Query: 391 QSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLD 446
+ T+I WG+QIR+YVL PY++VKDLRT PD VL+GDLD F+ + L+ ++
Sbjct: 311 -TKTEIGWGHQIRSYVLQPYQLVKDLRTGTTSGTPDEVLDGDLDTFMEAALAQKVN 365
>gi|239618275|ref|YP_002941597.1| peptide chain release factor 2 [Kosmotoga olearia TBF 19.5.1]
gi|259585228|sp|C5CGS4.1|RF2_KOSOT RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|239507106|gb|ACR80593.1| peptide chain release factor 2 [Kosmotoga olearia TBF 19.5.1]
Length = 370
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 172/355 (48%), Positives = 235/355 (66%), Gaps = 9/355 (2%)
Query: 99 IKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEH 158
IK + + +L+ + EL+ P++W D AG++ ++ +L ++ + QEL E+
Sbjct: 20 IKTTVDVDKIKEKLSRIEKELSDPSVWSDQRRAGKLGQQAQALRSQLDLLNKV-QELFEN 78
Query: 159 IDM-IKLAREENDTELELESLEALLT-MRRKSKEKELDALLSGELDPCSCYIEVQAGAGG 216
ID+ ++L+ E+ E LE+L LL KE EL+ LLS D + Y+ V GAGG
Sbjct: 79 IDIAVELSEED---ESYLENLNELLKEAEDMVKEFELNILLSSPYDAYNAYLSVHPGAGG 135
Query: 217 TESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGV 276
TES DWASM+L+MY WA+R Y+VT ++E PGE AGIK ATI + G YA+G K E GV
Sbjct: 136 TESQDWASMLLRMYIRWAERNNYKVTTIEEQPGEEAGIKSATINIAGPYAYGKLKYEAGV 195
Query: 277 HRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTT 336
HRLVRISPFD+ RRHTSFA+V+V P D + I DL+I+ +R+GGAGGQH N T
Sbjct: 196 HRLVRISPFDANHRRHTSFASVSVFPEM-DDDVEIDIRPEDLKIDTYRAGGAGGQHVNRT 254
Query: 337 DSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDI 396
+SAVRI HIPTGI TCQNERSQHQNKA+AM +L++++ +LE+ ++ Q + DI
Sbjct: 255 ESAVRITHIPTGIVVTCQNERSQHQNKATAMKILKAKLFELELEKKRQEKMKLMGEQKDI 314
Query: 397 SWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL--SASLDKDE 449
+WGNQIR+YV PY MVKD RTNYE D +V++G +D FI L AS+D+D+
Sbjct: 315 AWGNQIRSYVFQPYTMVKDHRTNYETGDVQAVMDGYIDDFIEKELLFFASIDEDK 369
>gi|418059360|ref|ZP_12697311.1| peptide chain release factor 2 [Methylobacterium extorquens DSM
13060]
gi|373567108|gb|EHP93086.1| peptide chain release factor 2 [Methylobacterium extorquens DSM
13060]
Length = 375
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 167/353 (47%), Positives = 235/353 (66%), Gaps = 3/353 (0%)
Query: 91 AIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKA 150
A QSI ++++ L W ++ RL L+A P+LW+DP A ++ RE L + +K
Sbjct: 11 AAKQSIGLLRRHLDWDTVDKRLAELNAASENPDLWNDPEAAQKVMRERQELDEAVTAIKK 70
Query: 151 FEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEV 210
E++L + +I+L E D E + + +++ ++++ LLSGE D Y+EV
Sbjct: 71 LERDLEDGATLIELGEMEGDQASISEGEATIKAVEKEAASRQVETLLSGEADGFDTYLEV 130
Query: 211 QAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYA 270
AGAGGTES DWA+M+ +MY WA+RR ++V +++ GE AGIK AT+ + G A+G+
Sbjct: 131 HAGAGGTESQDWANMLQRMYARWAERRKFKVEIVEMTDGEEAGIKGATLLIKGHNAYGWL 190
Query: 271 KAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGG 330
K E GVHRLVRISP+DS RRHTSFA+V V P D ++I ESD RI+ +RS GAGG
Sbjct: 191 KTESGVHRLVRISPYDSNARRHTSFASVWVYPVV-DDRIEIEIKESDCRIDTYRSSGAGG 249
Query: 331 QHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI-ARQAQMNAEH 389
QH NTTDSAVRI H PTGI CQ ERSQH+N+A+A +L++R+ + E+ R+ + NAE
Sbjct: 250 QHVNTTDSAVRITHNPTGIVVACQQERSQHKNRATAWNMLRARLYEAELKKREEKANAE- 308
Query: 390 TQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
S TDI WG+QIR+YVL PY++VKDLRT + +DPD VL+GDLD F+ + L+
Sbjct: 309 AASKTDIGWGHQIRSYVLQPYQLVKDLRTGTQSTDPDEVLDGDLDPFMEASLA 361
>gi|222148341|ref|YP_002549298.1| peptide chain release factor 2 [Agrobacterium vitis S4]
gi|221735329|gb|ACM36292.1| peptide chain release factor 2 [Agrobacterium vitis S4]
Length = 344
Score = 328 bits (840), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 159/331 (48%), Positives = 228/331 (68%), Gaps = 1/331 (0%)
Query: 112 LNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDT 171
++ L+ + PNLW+D A ++ RE L + V+ EQ++ ++I++I++ EE D
Sbjct: 1 MDWLNNKAEDPNLWNDAAEAQKLMRERQQLEDSIAGVRRLEQQMKDNIELIEMGEEEGDE 60
Query: 172 ELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYK 231
+ E+ + L ++ +S + +++A+LSGE D Y+EV +GAGGTES DWA+M+L+MY
Sbjct: 61 SIVKEAEDGLKALKAESGKLQVEAMLSGEADGNDTYVEVHSGAGGTESQDWANMLLRMYT 120
Query: 232 SWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRR 291
WA+R G++V L++ GE AGIK ATI V G A+G+ K E GVHRLVRISP+DS RR
Sbjct: 121 RWAERSGFKVELLEVHDGEEAGIKSATILVKGHNAYGWMKTESGVHRLVRISPYDSNARR 180
Query: 292 HTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITA 351
HTSF+++ V P D S + INESD RI+ +RS GAGGQH NTTDSAVRI HIP+GI
Sbjct: 181 HTSFSSIWVYPVV-DDSIQIDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPSGIAV 239
Query: 352 TCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYR 411
+CQ ERSQH+NKA A +L++R+ ++E+ ++ + S TDI WG+QIR+YVL PY+
Sbjct: 240 SCQQERSQHKNKAKAWDMLRARLYEVELKKREEAANAEAASKTDIGWGHQIRSYVLQPYQ 299
Query: 412 MVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
+VKDLRT E + PD VL GD+ F+ + L+
Sbjct: 300 LVKDLRTGVESTAPDDVLNGDISPFMEAALA 330
>gi|296283820|ref|ZP_06861818.1| peptide chain release factor 2 [Citromicrobium bathyomarinum JL354]
Length = 375
Score = 328 bits (840), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 163/358 (45%), Positives = 236/358 (65%), Gaps = 3/358 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
++H I ++ ++++ L W+ L+ L+A + P LWDDP A I RE L +
Sbjct: 6 QAHIDRIEAALALVRQSLDWERALRELDELNARVEDPTLWDDPKQAQAIMREQKRLESAI 65
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
V E+ + I+ +++ E D ++ E L +L + ++ ++ ALLSGE D
Sbjct: 66 GTVNTISSEMADAIEFVEMGEAEGDDDIVNEGLTSLEKLAARADADKVQALLSGEADAND 125
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
Y+EV AGAGGTES DWA M+++MY WA++RG++V ++ GE AGIK T+ + GE
Sbjct: 126 AYLEVHAGAGGTESQDWAEMLMRMYVRWAEKRGFKVETVEYQSGEQAGIKSVTLHIKGEN 185
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
A+GYAK E GVHRLVRISP+DS RRHTSF++V V P D ++INESDL+I+ +R+
Sbjct: 186 AYGYAKTESGVHRLVRISPYDSSARRHTSFSSVWVYPVI-DDDIEIEINESDLKIDTYRA 244
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIA-RQAQ 384
GAGGQH NTTDSAVRI H PTGI QN+RSQH+N+A+AM +L++R+ + E+A R+A
Sbjct: 245 SGAGGQHVNTTDSAVRITHQPTGIVVASQNDRSQHKNRATAMSMLKARLFEREMAEREAA 304
Query: 385 MNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
+ E+ + T+I WG+QIR+YVL PY++VKDLRT + P VL+G +D FI + L+
Sbjct: 305 ASGEYAEK-TEIGWGHQIRSYVLQPYQLVKDLRTGETSTAPGDVLDGAIDPFISAALA 361
>gi|341615264|ref|ZP_08702133.1| peptide chain release factor 2 [Citromicrobium sp. JLT1363]
Length = 375
Score = 327 bits (839), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 165/358 (46%), Positives = 235/358 (65%), Gaps = 3/358 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
++H I ++ ++++ L W+ L+ L+A + P LWDDP A I RE L +
Sbjct: 6 QAHIDRIEAALALVRQSLDWERALRELDELNARVEDPTLWDDPKQAQSIMREQKRLESAI 65
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
V E+ + I+ I+L E D + E L +L + ++ ++ ALLSGE D
Sbjct: 66 GTVNTISSEMADAIEFIELGEAEGDDDTVNEGLASLEKLAVRADADKVQALLSGEADAND 125
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
Y+EV AGAGGTES DWA M+++MY WA++RG++V ++ GE AGIK T+ + GE
Sbjct: 126 AYLEVHAGAGGTESQDWAEMLMRMYVRWAEKRGFKVETVEYQAGEQAGIKSVTLLIKGEN 185
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
A+GYAK E GVHRLVRISP+DS RRHTSF++V V P D ++INESDL+I+ +R+
Sbjct: 186 AYGYAKTESGVHRLVRISPYDSSARRHTSFSSVWVYPVI-DDDIEIEINESDLKIDTYRA 244
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIA-RQAQ 384
GAGGQH NTTDSAVRI H PTGI QN+RSQH+N+A+AM +L++R+ + E+A R+A
Sbjct: 245 SGAGGQHVNTTDSAVRITHQPTGIVVASQNDRSQHKNRATAMSMLKARLFEREMAEREAA 304
Query: 385 MNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
+ E+ + T+I WG+QIR+YVL PY++VKDLRT + P VL+G +D FI + L+
Sbjct: 305 ASGEYAEK-TEIGWGHQIRSYVLQPYQLVKDLRTGETSTAPGEVLDGAIDPFISAALA 361
>gi|329114780|ref|ZP_08243537.1| Peptide chain release factor 2 [Acetobacter pomorum DM001]
gi|326695911|gb|EGE47595.1| Peptide chain release factor 2 [Acetobacter pomorum DM001]
Length = 333
Score = 327 bits (839), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 156/319 (48%), Positives = 222/319 (69%), Gaps = 1/319 (0%)
Query: 124 LWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLT 183
+W+D A ++ RE L +++ V+A E + + ++I+LA E D +L E + L
Sbjct: 1 MWNDSDAAQKMMRERTLLANQIEGVEALETNVRDTSELIELAEAEGDADLVAEGMATLRD 60
Query: 184 MRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTL 243
+ ++K +E ++LLSGE D CY+EV AGAGGTE+ DW M+L+MY WA+ GY+VTL
Sbjct: 61 LAEEAKRRETESLLSGEADSNDCYLEVNAGAGGTEAQDWTEMLLRMYTRWAEAHGYKVTL 120
Query: 244 MDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPN 303
M+ GE AG+K ATI+V G A+G+ K E GVHRLVRISPFD+ RR TSFA+V V P
Sbjct: 121 MESSEGEQAGLKSATIQVSGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPV 180
Query: 304 SGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNK 363
D S ++IN++DL+++ FR+ GAGGQH N TDSA+RI H+PTGI CQ +RSQH+N+
Sbjct: 181 I-DDSIEIEINDADLKVDTFRASGAGGQHVNKTDSAIRITHMPTGIVVACQTDRSQHRNR 239
Query: 364 ASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVS 423
A+AM +L++R+ + E+ ++ A + TDI WG+QIR+YVL PY+MVKDLRT E
Sbjct: 240 ATAMQMLRARLYEAELQKREAEAAAAEAAKTDIGWGHQIRSYVLAPYQMVKDLRTGVETG 299
Query: 424 DPDSVLEGDLDGFILSYLS 442
+PD+VL+GDLD F+ + L+
Sbjct: 300 NPDAVLDGDLDAFMAAALA 318
>gi|149202750|ref|ZP_01879722.1| peptide chain release factor 2 [Roseovarius sp. TM1035]
gi|149144032|gb|EDM32066.1| peptide chain release factor 2 [Roseovarius sp. TM1035]
Length = 375
Score = 327 bits (839), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 170/357 (47%), Positives = 240/357 (67%), Gaps = 4/357 (1%)
Query: 90 AAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVK 149
A I +S++++++RL W+ RL +A + P LWDDP A + RE +L+ ++
Sbjct: 10 AEIEKSLELLRQRLGWETARHRLEEFNARVEDPTLWDDPARAQTLMRERQALVDALETHD 69
Query: 150 AFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIE 209
+ EL +++ +I+L E+D E+ E+ A+ + + + KEL+ALL GE D ++E
Sbjct: 70 GIKNELEDNLGLIELGEAESDAEVVGEAEAAIKALAKVAAAKELEALLDGEADSNDTFLE 129
Query: 210 VQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGY 269
+ AGAGGTES DWASM+ +MY WA++RGY V L E G+ AGIK A K+ G A+G+
Sbjct: 130 INAGAGGTESCDWASMLARMYVRWAEKRGYTVELQSESAGDEAGIKSAAYKISGHNAYGW 189
Query: 270 AKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAG 329
K+E GVHRLVRISPFDS +RHTSF++V V P D + +++N SD+RI+ +RS GAG
Sbjct: 190 LKSESGVHRLVRISPFDSAAKRHTSFSSVWVYPVV-DDNIEIEVNPSDIRIDTYRSSGAG 248
Query: 330 GQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ-AQMNAE 388
GQH NTTDSAVRI H+PTGI T +++SQHQN+ AM L+SR+ QLE+ R+ A +N
Sbjct: 249 GQHVNTTDSAVRITHMPTGIVVTS-SQKSQHQNRDIAMKALKSRLYQLELDRRNAAINEA 307
Query: 389 HTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
H + D WGNQIR+YVL PY+MVKDLRT E SD VL+GDLD F+ + L+ ++
Sbjct: 308 H-DAKGDAGWGNQIRSYVLQPYQMVKDLRTGVETSDTKGVLDGDLDEFMAATLAMNV 363
>gi|295689553|ref|YP_003593246.1| hypothetical protein Cseg_2164 [Caulobacter segnis ATCC 21756]
gi|295431456|gb|ADG10628.1| conserved hypothetical protein [Caulobacter segnis ATCC 21756]
Length = 373
Score = 327 bits (839), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 169/360 (46%), Positives = 237/360 (65%), Gaps = 3/360 (0%)
Query: 84 DWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
D ++ AA I QS+ ++++RL W +L+ L+A + P LWD P A +SRE +L
Sbjct: 4 DVEAAAADIEQSVGLLRRRLDWDVALRKLDELNARVEDPTLWDRPSEAQAVSRERAALAA 63
Query: 144 KMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDP 203
K++ V++ E++L + ++ +LA E D E ++ L ++ ++ EL+ALLSGE D
Sbjct: 64 KVEAVQSIERDLKDAVEYAELADMEGDEESLNDARVQLKALKDRAGRAELEALLSGEADG 123
Query: 204 CSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDG 263
YIE+ +GAGGTES DWA ++L+MY WA G + L++E G+ AGIK AT+ V G
Sbjct: 124 NDAYIEINSGAGGTESCDWAGILLRMYTRWANAHGMQTELIEETDGDQAGIKSATLLVKG 183
Query: 264 EYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERF 323
A+G+ K E GVHRLVRISP+DS RRHTSFA+ V P D + ++IN +D+R + +
Sbjct: 184 PNAYGWLKTEAGVHRLVRISPYDSSARRHTSFASAWVYPVV-DDTIEIEINPADVRTDTY 242
Query: 324 RSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI-ARQ 382
R+ GAGGQH N TDSAVR+ HIPTGI CQ RSQHQN+ A +L++R+ + E+ R+
Sbjct: 243 RASGAGGQHINKTDSAVRLTHIPTGIAVACQAGRSQHQNREEAWKMLRARLYEAELQKRE 302
Query: 383 AQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
A A Q TDI WG+QIR+YVL PY+MVKDLRTN E SD VL+GDLD F+ + L+
Sbjct: 303 AAQQALEDQK-TDIGWGHQIRSYVLQPYQMVKDLRTNVETSDTQGVLDGDLDAFMGAALA 361
>gi|192291110|ref|YP_001991715.1| hypothetical protein Rpal_2731 [Rhodopseudomonas palustris TIE-1]
gi|192284859|gb|ACF01240.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1]
Length = 376
Score = 327 bits (838), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 169/355 (47%), Positives = 242/355 (68%), Gaps = 9/355 (2%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNK----PNLWDDPVHAGRISREHGSLMGKMKE 147
I QS+ ++++ L VRL AELNK P+LW+DP A ++ +E SL +
Sbjct: 12 IKQSVGLLRRHLDVDQSTVRL----AELNKLAEDPDLWNDPQKAQKLMQERTSLEDSLTG 67
Query: 148 VKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCY 207
+ E+EL ++I+MI+L E D + E+ +AL ++++ +EL+ALLSGE D Y
Sbjct: 68 IGKVERELTDNIEMIELGEAEGDEGIVKEAEDALKALKKEVARRELEALLSGEADRFDTY 127
Query: 208 IEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAF 267
+EV AGAGGTES DWASM+L+MY WA++ G+++ ++E GE AGIK ATI++ G A+
Sbjct: 128 LEVHAGAGGTESQDWASMLLRMYVRWAEKHGFKIEYLEESEGEEAGIKSATIQISGHNAY 187
Query: 268 GYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGG 327
G+ K E GVHRLVRISPFDS RRHTSF++V + P D+S + I ESD+R++ RSGG
Sbjct: 188 GWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVI-DNSIKIDIAESDVRVDTMRSGG 246
Query: 328 AGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNA 387
AGGQH N T+SAVR+ HIPTG+ CQ RSQH+N+A A +L++R+ ++E+ ++ + A
Sbjct: 247 AGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLYEIELKKREEQAA 306
Query: 388 EHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
+ T+I WG+QIR+YVL PY+MVKDLRT + SD VL+GDLD F+ + L+
Sbjct: 307 ADQAAKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDEFMAATLA 361
>gi|418937449|ref|ZP_13491087.1| peptide chain release factor 2 [Rhizobium sp. PDO1-076]
gi|375055842|gb|EHS52064.1| peptide chain release factor 2 [Rhizobium sp. PDO1-076]
Length = 341
Score = 327 bits (837), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 159/321 (49%), Positives = 223/321 (69%), Gaps = 1/321 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
PNLW+D A ++ RE L + VK EQ++L++I++I++ EE D + ++ E L
Sbjct: 8 PNLWNDAQEAQKLMRERQQLDDSISGVKRLEQQMLDNIELIEMGEEEGDESIVKDAEEQL 67
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
++ ++ ++++A+LSGE D YIEV +GAGGTES DWA+M+L+MY WA+++G++V
Sbjct: 68 KLLKVEAARRQVEAMLSGEADSNDTYIEVHSGAGGTESQDWANMLLRMYIRWAEKQGFKV 127
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
+++ GE AGIK AT+ + G A+G+ K E GVHRLVRISP+DS RRHTSF++V V
Sbjct: 128 EVLEVHDGEEAGIKSATVHIKGHNAYGWMKTESGVHRLVRISPYDSNARRHTSFSSVWVY 187
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D S + INESD RI+ +RS GAGGQH NTTDSAVRI HIPTGI CQ ERSQH+
Sbjct: 188 P-VVDDSIQIDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQCQQERSQHK 246
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
NKA A +L++R+ + E+ ++ S TDI WG+QIR+YVL PY++VKDLRT E
Sbjct: 247 NKAKAWDMLRARMYEAELKKREDAANVEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVE 306
Query: 422 VSDPDSVLEGDLDGFILSYLS 442
+DPD VL G L+ F+ + L+
Sbjct: 307 STDPDYVLNGGLNEFMEAALA 327
>gi|374340372|ref|YP_005097108.1| peptide chain release factor 2 [Marinitoga piezophila KA3]
gi|372101906|gb|AEX85810.1| peptide chain release factor 2 [Marinitoga piezophila KA3]
Length = 368
Score = 327 bits (837), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 160/348 (45%), Positives = 232/348 (66%), Gaps = 7/348 (2%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
+ + + +K + R++ L ++ P+ W+D A +ISRE L +M+E
Sbjct: 13 LKEKFENLKNLFNIEKTTARISELENKMTDPDFWNDQKKAEKISRELQHLKHEMEEF--- 69
Query: 152 EQELLEHIDMIKLARE--ENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIE 209
L D + +A E E D ++ +++E L + +K K+ EL LLSG+ D + Y+
Sbjct: 70 -NNLSSLFDDLAVAIEFGEEDPSMKEQAMEILGEIEKKVKDFELAMLLSGKYDSNNVYLT 128
Query: 210 VQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGY 269
+ GAGGTES DWA M+L+MY WA++ Y++ ++D +PG+ AGIK T+K+ G +A+G
Sbjct: 129 IHPGAGGTESQDWADMLLRMYTRWAEKNNYKLEIIDYLPGDEAGIKSVTVKISGPFAYGK 188
Query: 270 AKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAG 329
K E GVHRLVR+SPFD+ RRHTSFA+V+V P ++I DL+I+ +R+GGAG
Sbjct: 189 LKYESGVHRLVRVSPFDAANRRHTSFASVSVTPEID-EEIDIEIRPDDLKIDTYRAGGAG 247
Query: 330 GQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEH 389
GQH N TDSAVRI H+PTGI CQNERSQHQNKA+AM +L++R+ +LE+ ++ + +
Sbjct: 248 GQHVNKTDSAVRITHLPTGIVVACQNERSQHQNKATAMQILKARLYELEMQKKMEEKMKL 307
Query: 390 TQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
+ DISWGNQIR+YVL+PY+MVKD RTNYE S+ D+VL+G+LDGFI
Sbjct: 308 MGDVKDISWGNQIRSYVLYPYKMVKDHRTNYETSNSDAVLDGELDGFI 355
>gi|417860203|ref|ZP_12505259.1| peptide chain release factor 2 [Agrobacterium tumefaciens F2]
gi|338823267|gb|EGP57235.1| peptide chain release factor 2 [Agrobacterium tumefaciens F2]
Length = 342
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 159/321 (49%), Positives = 224/321 (69%), Gaps = 1/321 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
P LW+D A ++ RE L + VKA EQ+L ++I++I+L E D E+ ++ ++L
Sbjct: 8 PTLWNDASEAQKLMRERQQLDDSINGVKALEQQLRDNIELIELGEMEGDDEIVKDAEDSL 67
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
++ ++ ++++A+LSGE D Y+EV +GAGGTES DWA+M+L+MY WA R G++V
Sbjct: 68 KALKSEANRRQVEAMLSGEADGNDTYLEVHSGAGGTESQDWANMLLRMYTRWADREGFKV 127
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
+++ GE AGIK ATI V G AFG+ K E GVHRLVRISP+DS RRHTSF++V V
Sbjct: 128 EVLEVHDGEEAGIKSATILVKGHNAFGWLKTESGVHRLVRISPYDSNARRHTSFSSVWVY 187
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D S + +NESD RI+ +RS GAGGQH NTTDSAVRI HIPTGI CQ ERSQH+
Sbjct: 188 PVV-DDSIQIDVNESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIAVACQQERSQHK 246
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
N+A A +L++R+ ++E+ ++ + S TDI WG+QIR+YVL PY++VKDLRT E
Sbjct: 247 NRAKAWDMLRARLYEVELQKREEAANAQAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVE 306
Query: 422 VSDPDSVLEGDLDGFILSYLS 442
+ P +VL+GDL+ F+ + L+
Sbjct: 307 STAPGNVLDGDLNEFMEAALA 327
>gi|315121916|ref|YP_004062405.1| peptide chain release factor 2 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495318|gb|ADR51917.1| peptide chain release factor 2 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 354
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 163/340 (47%), Positives = 228/340 (67%), Gaps = 1/340 (0%)
Query: 103 LQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMI 162
W N RL+ L+ + PNLW+ A + RE L + +KA + L ++I ++
Sbjct: 8 FDWDNALKRLHFLNDKAENPNLWEKVEEAKILMRERQHLDNAVSSLKALQDRLDDNIALL 67
Query: 163 KLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDW 222
LA EEN++ + ESL+ L ++ ++ K+ ++L SGE D Y+EV AGAGGTES DW
Sbjct: 68 DLAVEENNSSVLQESLDNLKQLKLDTEYKQFESLFSGEADSNDVYLEVHAGAGGTESQDW 127
Query: 223 ASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRI 282
A+M+++MY W++RR +++ L++ GE AGIK AT+ + G A+G+ K E GVHRLVRI
Sbjct: 128 ANMLVRMYIRWSERRKFKIDLLEVHDGEEAGIKSATLLIKGPNAYGWLKEEQGVHRLVRI 187
Query: 283 SPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRI 342
SP+DS RRHTSF++V V P D S ++INESD RI+ +R+ GAGGQH NTTDSAVRI
Sbjct: 188 SPYDSNSRRHTSFSSVWVYP-VVDESIEIEINESDCRIDTYRASGAGGQHVNTTDSAVRI 246
Query: 343 IHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQI 402
HIPTG+ CQ ERSQH+NKA A +L++++ LE+ ++ ++ S T+I WG QI
Sbjct: 247 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYDLELQKREEIANIGESSKTEIGWGRQI 306
Query: 403 RTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
R+YVL PY+MVKDLRTN E S P VL GDLD F+ + L+
Sbjct: 307 RSYVLQPYQMVKDLRTNIEKSSPLDVLNGDLDDFMKAALA 346
>gi|384918646|ref|ZP_10018716.1| peptide chain release factor 2 [Citreicella sp. 357]
gi|384467480|gb|EIE51955.1| peptide chain release factor 2 [Citreicella sp. 357]
Length = 373
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 167/352 (47%), Positives = 241/352 (68%), Gaps = 5/352 (1%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
I +S+ ++ +RL W+ RL +A + PNLWDDP A ++ R+ L+ M+ +
Sbjct: 12 IEKSLNLLGQRLDWETAPHRLEEFNARVEDPNLWDDPAAAQKLMRDRQMLVDAMETYHSI 71
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
+Q+L +++++I+L E+D ++ ++ AL T+ K+ +KEL+ALL GE D ++E+
Sbjct: 72 KQDLSDNLELIELGEMEDDADVVSDAEGALATLSEKAAQKELEALLDGEADGNDTFLEIN 131
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AGAGGTE+ DWA+M+ +MY WA++RGY V L E G AGIK K+ G+ A+G+ K
Sbjct: 132 AGAGGTEACDWAAMLQRMYVRWAEKRGYEVELQFEEAGAEAGIKSCGYKISGQNAYGWLK 191
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
+E GVHRLVRISPF G R TSFA+V V P D + +++N SD+RI+ +RS GAGGQ
Sbjct: 192 SESGVHRLVRISPFGKGT-RETSFASVWVYPVV-DDNIEIEVNPSDIRIDTYRSSGAGGQ 249
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ-AQMNAEHT 390
H NTTDSAVRI HIPT I T +E+SQHQN+ AM L+SR+ Q+E+ R+ A++NA+H
Sbjct: 250 HVNTTDSAVRITHIPTNIVVTS-SEKSQHQNRDIAMKALKSRLYQMELDRRNAEINAQH- 307
Query: 391 QSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
++ D WGNQIR+YVL PY+MVKDLRT++E SD VL+G LD F+ + L+
Sbjct: 308 EAKGDAGWGNQIRSYVLQPYQMVKDLRTSHETSDTQGVLDGALDPFMAATLA 359
>gi|126726324|ref|ZP_01742165.1| peptide chain release factor 2 [Rhodobacterales bacterium HTCC2150]
gi|126704187|gb|EBA03279.1| peptide chain release factor 2 [Rhodobacteraceae bacterium
HTCC2150]
Length = 375
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 162/357 (45%), Positives = 239/357 (66%), Gaps = 2/357 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
+++ AI +S+ ++++R+ ++ + RL +A PNLW+DP A ++ R+ L+
Sbjct: 6 QNNVEAINKSLALLRQRMDFETVPHRLEEFNALTEDPNLWNDPEKAQKLMRDRQLLLDAY 65
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
Q+L +++++I+L E+D ++ E+ L ++ + +KEL+ALL+GE D
Sbjct: 66 NNYNKLAQDLADNVELIELGEMEDDEDVVAEAEAGLRSVVEIAAKKELEALLNGEADSND 125
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
++E+ +GAGGTES DWA+M+ +MY WA+ RGY+V L E GE AGIK A K+ G
Sbjct: 126 TFLEINSGAGGTESCDWANMLARMYVRWAEARGYKVELQSETAGEEAGIKSAAYKISGHN 185
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
A+G+ K+E GVHRLVRISPFDS +RHTSF+++ V P D + +++N +D+RI+ +RS
Sbjct: 186 AYGWLKSESGVHRLVRISPFDSAAKRHTSFSSIWVYP-VVDDNIDIEVNPADIRIDTYRS 244
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQM 385
GAGGQH NTTDSAVRI H PTGI T +E+SQHQN+ AM L+SR+ Q+E+ R+
Sbjct: 245 SGAGGQHVNTTDSAVRITHHPTGIVVTS-SEKSQHQNRDIAMKALKSRLYQMELDRRNAA 303
Query: 386 NAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
E ++ D WGNQIR+YVL PY+MVKDLRTN E SD VL+GDLD F+ + L+
Sbjct: 304 INEAHENKGDAGWGNQIRSYVLQPYQMVKDLRTNVETSDTKGVLDGDLDQFMAATLA 360
>gi|310815685|ref|YP_003963649.1| peptide chain release factor 2 [Ketogulonicigenium vulgare Y25]
gi|385233196|ref|YP_005794538.1| peptide chain release factor 2 [Ketogulonicigenium vulgare WSH-001]
gi|308754420|gb|ADO42349.1| peptide chain release factor 2 [Ketogulonicigenium vulgare Y25]
gi|343462107|gb|AEM40542.1| Peptide chain release factor 2 [Ketogulonicigenium vulgare WSH-001]
Length = 375
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 166/354 (46%), Positives = 244/354 (68%), Gaps = 4/354 (1%)
Query: 90 AAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVK 149
AAI +SI ++ +R+ + + RL +A + P LWD+P A ++ R+ L+ K+ V
Sbjct: 10 AAIEKSITLVAQRMDRETASYRLEEFNARVEDPTLWDNPEAAQKLMRDRQVLLDKISNVD 69
Query: 150 AFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIE 209
A E++L ++I++I++ E D ++ E+ AL +R + +KE++ALL GE D ++E
Sbjct: 70 ALERDLRDNIELIEMGEAEGDDDVVAEAEAALRALRDVAGKKEIEALLDGEADGNDTFLE 129
Query: 210 VQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGY 269
+ +GAGGTES DWAS++ +MY WA+++GY V + E PGE AGIK + K+ G A+G+
Sbjct: 130 INSGAGGTESCDWASILARMYVRWAEKKGYTVEMQSESPGEEAGIKSVSYKISGHNAYGW 189
Query: 270 AKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAG 329
K+E GVHRLVRISP+DS RRHTSF++V V P D + +++ + D+RI+ +RS GAG
Sbjct: 190 LKSESGVHRLVRISPYDSAARRHTSFSSVWVYPVV-DDNIEIEVQDKDIRIDTYRSSGAG 248
Query: 330 GQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ-AQMNAE 388
GQH NTTDSAVRI H+PTGI T +++SQHQN+ AM L+SR+ Q+E+ R+ A +N
Sbjct: 249 GQHVNTTDSAVRITHLPTGIVVTS-SQKSQHQNRDIAMKALKSRLYQIELDRRNAAINEA 307
Query: 389 HTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
H +S WGNQIR+YVL PY+MVKDLRT++E SD VL+GDLDGF+ + L+
Sbjct: 308 H-ESKGSAGWGNQIRSYVLQPYQMVKDLRTSHETSDTQGVLDGDLDGFMAATLA 360
>gi|410944463|ref|ZP_11376204.1| peptide chain release factor 2 [Gluconobacter frateurii NBRC
101659]
Length = 322
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 155/307 (50%), Positives = 222/307 (72%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE +L +++ V+ EQ++ +++++LA ENDT+L E++ L + + +++E+++
Sbjct: 2 RERTTLANQIEGVQQIEQDVEGTLELVELAEMENDTDLVQEAITTLRGLAAEVQKREIES 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D CY+EV AGAGGTE+ DWA M+L+MY WA++ GY+VT ++ GE AGIK
Sbjct: 62 LLSGEADSNDCYVEVNAGAGGTEAQDWAEMILRMYTRWAEQHGYKVTFIESSEGEQAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI++ G A+G+ K E GVHRLVRISPFD+ RR TSFA+V V P D S V+IN+
Sbjct: 122 SATIQISGHNAYGWMKTEAGVHRLVRISPFDAAARRQTSFASVWVYPVV-DDSIEVEIND 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SDLR++ FR+ GAGGQH N TDSA+RI HIPTGI CQ +RSQH+N+A AM +L++R+
Sbjct: 181 SDLRVDTFRASGAGGQHVNKTDSAIRITHIPTGIVVACQTDRSQHRNRAKAMEMLRARMY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ ++ A+ + TDI WG+QIR+YVL PY++VKDLRTN E +PD+VL+G LD
Sbjct: 241 EAELQKREAAAAQTEAAKTDIGWGHQIRSYVLAPYQLVKDLRTNVEKGNPDAVLDGALDD 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMSASLA 307
>gi|237755833|ref|ZP_04584431.1| peptide chain release factor 2 [Sulfurihydrogenibium yellowstonense
SS-5]
gi|237691998|gb|EEP61008.1| peptide chain release factor 2 [Sulfurihydrogenibium yellowstonense
SS-5]
Length = 369
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 170/376 (45%), Positives = 242/376 (64%), Gaps = 8/376 (2%)
Query: 77 ILDESEGDWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISR 136
I++E + W+ I + +K+ L+ + L + L + PN W+D A IS
Sbjct: 2 IVEEIKTKWEE----IKEKWDNLKEILKPEKLEEEIKQLDDLMADPNFWNDTKKAQEISS 57
Query: 137 EHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDAL 196
L K++E+ ++++ +D I L E D EL E + L + ++ EL +L
Sbjct: 58 RRNYLGEKLEEILTVDEKINNLLDYITLLEMEEDQELYNEVEKELKEIEKEISRLELGSL 117
Query: 197 LSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKR 256
LS E+D + + VQAG+GG E+ DW M+L+MY WA++RGY+V L+D P ++AG+K
Sbjct: 118 LSDEMDSKNAILTVQAGSGGVEACDWTEMLLRMYTRWAEKRGYQVELVDFQPDDVAGVKS 177
Query: 257 ATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINES 316
AT+ + G YA+GY K E GVHRLVRISPFD+ KRRHTSF+AV+VIP D V+INE
Sbjct: 178 ATVIIKGPYAYGYLKGEQGVHRLVRISPFDANKRRHTSFSAVSVIPEI-DEDIKVEINEE 236
Query: 317 DLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQ 376
DLRI+ +R+GGAGGQH N TDSAVRI HIPTGI CQ+ERSQ QNK AM +L++++ Q
Sbjct: 237 DLRIDTYRAGGAGGQHVNKTDSAVRITHIPTGIVVACQSERSQLQNKLKAMNMLKAKLYQ 296
Query: 377 LEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGF 436
LE+ ++ + E DI+WG+QIR+YV PY+MVKDLRT +E + ++V++G++D F
Sbjct: 297 LELEKRKEKQKELEGEKKDITWGSQIRSYVFQPYQMVKDLRTGFETGNIEAVMDGEIDDF 356
Query: 437 ILSYLSASLDKDEGGQ 452
I SYL K +GGQ
Sbjct: 357 IESYLKW---KAKGGQ 369
>gi|340776437|ref|ZP_08696380.1| peptide chain release factor 2 [Acetobacter aceti NBRC 14818]
Length = 323
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 152/310 (49%), Positives = 223/310 (71%), Gaps = 1/310 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L +++ V+ E E+ + +++I +A EE D ++ + ++ L + ++K +E ++
Sbjct: 3 RERTLLANQIEGVQNLENEVEDTLELISMAEEEGDADMVADGMKTLNRLAEEAKRRETES 62
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D CY+EV AGAGGTE+ DWA M+L+MY WA+ GY++T+++ GE AG+K
Sbjct: 63 LLSGEADSNDCYLEVNAGAGGTEAQDWAEMLLRMYSRWAEAHGYKLTMIESSEGEQAGLK 122
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI+V G A+G+ K E GVHRLVRISPFD+ RR TSFA+V V P D + ++INE
Sbjct: 123 SATIQVSGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVFPVV-DDTIEIEINE 181
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
+DL+++ FR+ GAGGQH N T+SA+RI H+PTGI CQ +RSQH+N+A+AMG+L++R+
Sbjct: 182 ADLKVDTFRASGAGGQHVNKTESAIRITHVPTGIIVACQTDRSQHRNRATAMGMLKARMY 241
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ R+ A+ + TDI WG+QIR+YVL PY+MVKDLRTN E +PD+VL+GDLD
Sbjct: 242 EAELQRREAAAAQTEAAKTDIGWGHQIRSYVLAPYQMVKDLRTNVEKGNPDAVLDGDLDD 301
Query: 436 FILSYLSASL 445
F+ + L+A +
Sbjct: 302 FMAASLAARV 311
>gi|126735602|ref|ZP_01751347.1| peptide chain release factor 2 [Roseobacter sp. CCS2]
gi|126714789|gb|EBA11655.1| peptide chain release factor 2 [Roseobacter sp. CCS2]
Length = 374
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 166/357 (46%), Positives = 242/357 (67%), Gaps = 2/357 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
+++ AI +S+ ++ +R+ + RL +A + P LWDDP A ++ RE L+ M
Sbjct: 6 QNYVEAIEKSLALLAQRMDRETAPHRLEEFNARVEDPTLWDDPEAAQKLMRERQLLVDAM 65
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
+ QEL ++I++I+L E D E+ E+ AL+ + K+ +KEL+ALL GE D
Sbjct: 66 GNYDSINQELSDNIELIELGEMEEDAEVVAEAEAALVKLADKAAKKELEALLDGEADGND 125
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
++E+ AGAGGTES DWA+M+ +MY WA+++GY+V L E G+ AGIK A+ K+ G
Sbjct: 126 TFLEINAGAGGTESCDWANMLARMYVRWAEKKGYKVELQAEQSGDEAGIKSASYKISGHN 185
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
A+G+ K+E GVHRLVRISPFDS +RHTSF +V V P D + +++N +D+R++ +RS
Sbjct: 186 AYGWLKSESGVHRLVRISPFDSAAKRHTSFTSVKVYP-VVDDNIEIEVNPADIRLDTYRS 244
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQM 385
GAGGQH NTTDSAVRI H PTGI T +E+SQHQN+ A+ L+SR+ Q+E+ +++ +
Sbjct: 245 SGAGGQHVNTTDSAVRITHHPTGIVVTS-SEKSQHQNRDIAIKALKSRLYQMELDKRSTL 303
Query: 386 NAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
E ++ D WGNQIR+YVL PY+MVKDLRTN+E SD VL+GDLDG + + L+
Sbjct: 304 VNEAHENAGDAGWGNQIRSYVLQPYQMVKDLRTNFETSDTKGVLDGDLDGLMAATLA 360
>gi|399059016|ref|ZP_10744900.1| peptide chain release factor 2 [Novosphingobium sp. AP12]
gi|398040223|gb|EJL33337.1| peptide chain release factor 2 [Novosphingobium sp. AP12]
Length = 375
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 162/357 (45%), Positives = 227/357 (63%), Gaps = 1/357 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
++H I +++ +++K L W R + L+A + P LWD P A + +E L +
Sbjct: 6 QAHIVRIEKALALVRKFLDWDRALRRFDELNARVEDPTLWDKPKEAEAVMKERRRLEASI 65
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
V E+ + + ++L E D E E L L + ++ ++ ALL GE D
Sbjct: 66 GTVNQISAEMADAAEFVELGEMEGDEETIAEGLATLKALADRADADKIQALLGGEADAND 125
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
Y+EV AGAGGTES DWA ++ +MY WA+RRGY+V L+D GE AGIK T+ + GE
Sbjct: 126 TYLEVHAGAGGTESQDWAEILQRMYTRWAERRGYKVELVDYHAGEAAGIKSCTLLIKGEN 185
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
A+GYAK E GVHRLVRISP+DS RRHTSF++V V P D + + IN SDL+I+ +R+
Sbjct: 186 AYGYAKTESGVHRLVRISPYDSAARRHTSFSSVWVYPVI-DDTFEIDINPSDLKIDTYRA 244
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQM 385
GAGGQH NTTDSAVRI H P+GI Q +RSQH+N+ AMG+L++R+ + E+ R+ +
Sbjct: 245 SGAGGQHVNTTDSAVRITHQPSGIIVASQIDRSQHKNREIAMGMLKARMFEAEMRRREEA 304
Query: 386 NAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
+ S ++I WG+QIR+YVL PY+ VKDLRT Y + PD VL+GDLD F+ + LS
Sbjct: 305 ASAEHASKSEIGWGHQIRSYVLQPYQQVKDLRTGYVSTSPDDVLDGDLDPFMAAALS 361
>gi|254294252|ref|YP_003060275.1| hypothetical protein Hbal_1892 [Hirschia baltica ATCC 49814]
gi|254042783|gb|ACT59578.1| hypothetical protein Hbal_1892 [Hirschia baltica ATCC 49814]
Length = 370
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 165/363 (45%), Positives = 245/363 (67%), Gaps = 1/363 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
++ A I QSI+++++RL W + RL L+A P+ W+D +A ++ RE ++ M
Sbjct: 6 QAMADKIQQSIELLRRRLDWDVSSKRLEELNALSEDPDFWNDAENAQKLMRERTKIVTAM 65
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
++ A E E+ + +M ++A E D L + +E++ +++ EL ALLSGE+D
Sbjct: 66 DDITALETEISDAEEMAEMAEMEGDDSLLEDIVESMKAALIRAERAELSALLSGEVDGND 125
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
C++E+ AGAGGTES DWA+M+ +MY WA G +V +D GE AGIK AT+KV GE
Sbjct: 126 CFVEINAGAGGTESQDWANMLRRMYVRWANAHGMKVEELDSHDGEEAGIKSATLKVSGEN 185
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
A+G+ K+E GVHRLVRISPFDS +RHTSF++VAV P D + V+I + D+R + +R+
Sbjct: 186 AYGWLKSESGVHRLVRISPFDSNAKRHTSFSSVAVSP-VLDDTIEVEIEDKDVRTDTYRA 244
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQM 385
G+GGQH N TDSA+R+ H PTGI CQ++RSQH+N+ASA +L++R+ +L++ +A+
Sbjct: 245 SGSGGQHINKTDSAIRLTHAPTGIVVACQSDRSQHKNRASAWNMLRARIYELKMRERAEA 304
Query: 386 NAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ + TDI WG+QIR+YVL PY+M+KDLRT E SD VL+GDLD F+ + LSA++
Sbjct: 305 AQANADAKTDIGWGHQIRSYVLQPYQMIKDLRTGVETSDTKGVLDGDLDKFLAASLSAAV 364
Query: 446 DKD 448
D
Sbjct: 365 GGD 367
>gi|84502908|ref|ZP_01001021.1| peptide chain release factor 2 [Oceanicola batsensis HTCC2597]
gi|84388891|gb|EAQ01761.1| peptide chain release factor 2 [Oceanicola batsensis HTCC2597]
Length = 374
Score = 325 bits (832), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 166/352 (47%), Positives = 237/352 (67%), Gaps = 5/352 (1%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
I +S++++++R+ W+ RL +A + PNLWDDP A + ++ +L+ + +
Sbjct: 12 IEKSLELLRQRMNWETAQHRLEEFNARVEDPNLWDDPEKAQALMKDRQALVDSIAVHDSI 71
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
QEL ++ ++I+L E+D E+ E+ AL ++ ++ EKEL+ALL+GE D ++E+
Sbjct: 72 RQELSDNAELIELGEMEDDQEVVAEAETALRALKERAAEKELEALLNGEADSNDTFLEIN 131
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AGAGGTE+ DWA M+ +MY WA++RGY+V L E PG AGIK K+ G A+G+ K
Sbjct: 132 AGAGGTEACDWAQMLQRMYVRWAEKRGYKVELQSEEPGAEAGIKSCAYKITGHNAYGWLK 191
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
+E GVHRLVRISPF G R TSFA+V V P D + + +N +D+RI+ +RS GAGGQ
Sbjct: 192 SESGVHRLVRISPFGKGT-RETSFASVWVYP-VVDDNIDIDVNPADIRIDTYRSSGAGGQ 249
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ-AQMNAEHT 390
H NTTDSAVRI H PTGI T +E+SQHQN+ AM L+SR+ QLE+ R+ A +N H
Sbjct: 250 HVNTTDSAVRITHHPTGIVVTS-SEKSQHQNRDIAMKALKSRLYQLELDRRNAAINEAH- 307
Query: 391 QSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
++ WGNQIR+YVL PY+MVKDLRT +E SD VL+G+LDGF+ + L+
Sbjct: 308 ENKGSAGWGNQIRSYVLQPYQMVKDLRTEHETSDTQGVLDGNLDGFMAATLA 359
>gi|453329998|dbj|GAC87976.1| translation peptide chain release factor 2 [Gluconobacter
thailandicus NBRC 3255]
Length = 322
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 155/307 (50%), Positives = 221/307 (71%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE +L +++ V+ EQ++ +++++LA ENDT+L E+L L + + +++E+++
Sbjct: 2 RERTTLANQIEGVQQIEQDVEGTLELVELAEMENDTDLVQEALTTLRGLAAEVQKREIES 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D CY+EV AGAGGTE+ DWA M+L+MY WA++ GY+VT ++ GE AGIK
Sbjct: 62 LLSGEADSNDCYVEVNAGAGGTEAQDWAEMILRMYTRWAEQHGYKVTFIESSEGEQAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI++ G A+G+ K E GVHRLVRISPFD+ RR TSFA+V V P D S V+IN+
Sbjct: 122 SATIQISGHNAYGWMKTEAGVHRLVRISPFDAAARRQTSFASVWVYPVV-DDSIEVEIND 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SDLR++ FR+ GAGGQH N TDSA+RI HIPTGI CQ +RSQH+N+A AM +L++R+
Sbjct: 181 SDLRVDTFRASGAGGQHVNKTDSAIRITHIPTGIVVACQTDRSQHRNRAKAMEMLKARMY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ ++ A+ + TDI WG+QIR+YVL PY++VKDLRT E +PD+VL+G LD
Sbjct: 241 EAELQKREAAAAQTEAAKTDIGWGHQIRSYVLAPYQLVKDLRTGVEKGNPDAVLDGALDD 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMSASLA 307
>gi|337269139|ref|YP_004613194.1| hypothetical protein Mesop_4679 [Mesorhizobium opportunistum
WSM2075]
gi|336029449|gb|AEH89100.1| hypothetical protein Mesop_4679 [Mesorhizobium opportunistum
WSM2075]
Length = 376
Score = 324 bits (831), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 175/361 (48%), Positives = 242/361 (67%), Gaps = 6/361 (1%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
I Q+I ++++ L W RL L+ +LW++P+ A ++ RE L + VK
Sbjct: 12 IRQAITLLRRHLDWDQAIKRLEYLNVRAEDASLWNEPLEAQKLMRERQGLEEGIASVKGL 71
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
Q L ++I +I+L EE D + E+ AL +M+ ++K ++++ LLSGE D Y+EV
Sbjct: 72 TQALEDNIGLIELGEEEGDEGVIAEAEAALRSMQGEAKARQVETLLSGEADANDTYLEVH 131
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AGAGGTES DWASM+L+MY WA+RR ++V +++ GE AGIK AT+ + G A+G+ K
Sbjct: 132 AGAGGTESQDWASMLLRMYTRWAERRRFKVEVLEVHDGEEAGIKSATLLIKGHNAYGWLK 191
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
E GVHRLVRISP+DS RRHTSFA+V V P D + + ++ESD+RI+ +RS G+GGQ
Sbjct: 192 TESGVHRLVRISPYDSNARRHTSFASVWVYPVI-DDTIEIDVSESDVRIDTYRSSGSGGQ 250
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI-ARQAQMNAEHT 390
H NTTDSAVRI HI TGI CQ ERSQH+NKA A +L+SR+ + E+ R+A NA
Sbjct: 251 HVNTTDSAVRITHIATGIAVACQAERSQHKNKAKAWEMLRSRLYEEELKKREAVANATEA 310
Query: 391 QSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKDEG 450
S +DI WG+QIR+YVL PY++VKDLRT E + P SVL+GDLD F+ + LS + EG
Sbjct: 311 -SKSDIGWGHQIRSYVLQPYQLVKDLRTGVESTSPSSVLDGDLDDFMEASLSQRI---EG 366
Query: 451 G 451
G
Sbjct: 367 G 367
>gi|221639399|ref|YP_002525661.1| peptide chain release factor 2 [Rhodobacter sphaeroides KD131]
gi|221160180|gb|ACM01160.1| Bacterial peptide chain release factor 2 [Rhodobacter sphaeroides
KD131]
Length = 375
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 169/368 (45%), Positives = 241/368 (65%), Gaps = 8/368 (2%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
++ AI +S+ ++ +R+ + RL A + NLW+DP A ++ RE LM ++
Sbjct: 6 QNQVEAIRRSLALLGQRMDLETAPHRLEEFDAMIEDGNLWNDPARAQKLMRERQQLMDQL 65
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
K + L +++++I+L E D E+ E+ A+ + ++ KEL+ALL GE D
Sbjct: 66 STYKLIDTGLRDNVELIELGEAEGDEEIVTEAEAAIRALVETARAKELEALLDGEADGND 125
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
++E+ AGAGGTES DWASM+ +MY WA+R+GY+V L E GE AGIK A K+ G
Sbjct: 126 TFLEINAGAGGTESCDWASMLARMYVRWAERKGYKVELQSESAGEEAGIKSAAYKISGPN 185
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
A+G+ K+E GVHRLVRISP+DS RRHTSF++V V P D + ++I +D+RI+ +RS
Sbjct: 186 AYGWLKSESGVHRLVRISPYDSAARRHTSFSSVWVYPVV-DDNIEIEIPANDIRIDTYRS 244
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI-ARQAQ 384
GAGGQH NTTDSAVRI H+PT I T + +SQHQN+ +AM L++R+ QLE+ R A
Sbjct: 245 SGAGGQHVNTTDSAVRITHLPTNIVVTS-SMKSQHQNREAAMNALKARLYQLELDKRNAA 303
Query: 385 MNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSAS 444
+NA+H ++ + WGNQIR+YVL PY+MVKDLRT E SD VL+GDLD F + A+
Sbjct: 304 INAQH-EAKGEAGWGNQIRSYVLQPYQMVKDLRTGVETSDTQGVLDGDLDRF----MQAT 358
Query: 445 LDKDEGGQ 452
L +D G+
Sbjct: 359 LAQDVAGK 366
>gi|405381835|ref|ZP_11035658.1| peptide chain release factor 2 [Rhizobium sp. CF142]
gi|397321722|gb|EJJ26137.1| peptide chain release factor 2 [Rhizobium sp. CF142]
Length = 342
Score = 324 bits (830), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 158/321 (49%), Positives = 223/321 (69%), Gaps = 1/321 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
PNLW+D A ++ RE L + VKA EQ+L ++++++ L EE D + E+ AL
Sbjct: 8 PNLWNDAQEAQKLMRERQQLDDGINGVKALEQQLSDNVELVDLGEEEGDDSIVKEAEAAL 67
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
+++ ++ ++++A+LSGE D Y+EV +GAGGTES DWA+M+L+MY WA+R+ ++V
Sbjct: 68 KSLQAEAARRQVEAMLSGEADGNDTYLEVHSGAGGTESQDWANMLLRMYTRWAERQRFKV 127
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
L++ GE AGIK AT+ V G A+G+ K E GVHRLVRISP+DS RRHTSF+++ V
Sbjct: 128 ELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFSSIWVY 187
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D S ++INESD RI+ +RS GAGGQH NTTDSAVRI HIPTGI CQ ERSQH+
Sbjct: 188 PVV-DDSIQIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQCQQERSQHK 246
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
N+A A +L++R+ + E+ ++ S TDI WG+QIR+YVL PY++VKDLRT
Sbjct: 247 NRAKAWDMLRARMYEAELKKREDAANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVA 306
Query: 422 VSDPDSVLEGDLDGFILSYLS 442
+ PD VL+GDL+ F+ + L+
Sbjct: 307 STAPDDVLDGDLNEFMEAALA 327
>gi|254437327|ref|ZP_05050821.1| peptide chain release factor 2 [Octadecabacter antarcticus 307]
gi|198252773|gb|EDY77087.1| peptide chain release factor 2 [Octadecabacter antarcticus 307]
Length = 375
Score = 324 bits (830), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 166/351 (47%), Positives = 243/351 (69%), Gaps = 2/351 (0%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
I +S+ ++ +R++W + RL +A + P LWDDP A ++ R+ SL+ + +
Sbjct: 12 IEKSLSLLAQRMEWDTASHRLEEFNARVEDPTLWDDPEAAQKLMRDRQSLVDAIASYEVI 71
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
+QEL +HI++I++ E+D+++ E+ EAL + K+ +KEL+ALL+GE D ++E+
Sbjct: 72 KQELSDHIELIEMGEMEDDSDIVTEAEEALKVLAAKAAKKELEALLNGEADANDTFLEIN 131
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
+GAGGTE+ DWA+M+ +MY WA+R+GY+V L E GE GIK A+ K+ G A+G+ K
Sbjct: 132 SGAGGTEACDWAAMLARMYIRWAERKGYKVDLQSESAGEEVGIKSASYKISGHNAYGWLK 191
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
+E GVHRLVRISPFDS +RHTSF +V V P D + +++N SD+RI+ +RS GAGGQ
Sbjct: 192 SESGVHRLVRISPFDSAAKRHTSFTSVKVYP-VVDDNIEIEVNPSDIRIDTYRSSGAGGQ 250
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQ 391
H NTTDSAVRI H PTGI T +E+SQHQN+ AM L+SR+ Q+E+ +++ + E +
Sbjct: 251 HVNTTDSAVRITHAPTGIVVTS-SEKSQHQNRDIAMKALKSRLYQIELDKRSALVNEVHE 309
Query: 392 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
+ D WGNQIR+YVL PY+MVKDLRT +E SD VL+GDLD F+ + L+
Sbjct: 310 NAGDAGWGNQIRSYVLQPYQMVKDLRTRHETSDTQGVLDGDLDAFMGATLA 360
>gi|163784774|ref|ZP_02179571.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1]
gi|159879956|gb|EDP73663.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1]
Length = 348
Score = 324 bits (830), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 162/342 (47%), Positives = 232/342 (67%), Gaps = 13/342 (3%)
Query: 106 KNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQEL------LEHI 159
+++ +L L ++ P+ W+D A +IS E L K++++ E+++ +E +
Sbjct: 4 EDIKQKLKELDEIMSSPDFWNDQKKAQKISAERTYLSDKLEKLNNIEEKINYLEEYIELL 63
Query: 160 DMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTES 219
++ + D E E+++LE L+ + E+++LLSGE D + + VQAG+GG E+
Sbjct: 64 ELEPDEEAKQDLENEIKNLETLIN------KFEVESLLSGEYDSKNAIVSVQAGSGGVEA 117
Query: 220 MDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRL 279
DWA M+L+MY WA++ GY V ++D P ++AGIK AT V G YA+GY + E GVHRL
Sbjct: 118 CDWAEMLLRMYLRWAEKNGYNVEIVDYQPDDVAGIKSATFIVKGPYAYGYLQGEQGVHRL 177
Query: 280 VRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSA 339
VRISPFDS KRRHTSFAAV+VIP G+ V+INE DLRI+ FR+ GAGGQH N TDSA
Sbjct: 178 VRISPFDSNKRRHTSFAAVSVIPEIGE-EIKVEINEDDLRIDTFRASGAGGQHVNKTDSA 236
Query: 340 VRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWG 399
VRI HIPTGI +CQ+ERSQ QN+A AM +L++++ QLEI +Q + E +ISWG
Sbjct: 237 VRITHIPTGIVVSCQSERSQIQNRAKAMQMLKAKLYQLEIEKQKEKRKELEGEKKEISWG 296
Query: 400 NQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
+QIR+YV HPY+MVKDLRT YE + +V++G++D F+ +YL
Sbjct: 297 SQIRSYVFHPYQMVKDLRTGYETGNIQAVMDGEIDSFMETYL 338
>gi|158425248|ref|YP_001526540.1| peptide chain release factor 2 [Azorhizobium caulinodans ORS 571]
gi|158332137|dbj|BAF89622.1| peptide chain release factor 2 [Azorhizobium caulinodans ORS 571]
Length = 376
Score = 323 bits (829), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 164/351 (46%), Positives = 231/351 (65%), Gaps = 1/351 (0%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
I S+ ++++ L RL L+A P LWDDP A +I +E SL + +
Sbjct: 12 INASVDLLRQHLNVDRSRRRLAELNAIAEDPTLWDDPERAQKIMQERTSLEDALNAIDRI 71
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
++L ++I++I+L E D + E+ AL ++ + +ELDALLSGE D Y+EV
Sbjct: 72 TRDLTDNIELIELGEAEGDESVITEAAGALDALKAELARRELDALLSGEADSNDTYLEVH 131
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AGAGGT+S DWA M+L+MY+ W +R G++V L+DE GE AG+K ATI V G A+G+ K
Sbjct: 132 AGAGGTDSQDWAEMLLRMYRRWCERHGFKVELVDESAGEQAGLKSATIIVKGHNAYGWLK 191
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
E GVHRLVRISPFDS RR TSFA++ V P D V+INESD+R++ RSGGAGGQ
Sbjct: 192 TEAGVHRLVRISPFDSNARRQTSFASIDVYPVIDDRIV-VEINESDVRVDTMRSGGAGGQ 250
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQ 391
H N T+SAVR+ HIPTGI Q +RSQH+N+A+A +L++++ ++E+ ++ + A
Sbjct: 251 HVNKTESAVRLTHIPTGIAVVSQGDRSQHKNRATAWNMLRAKLFEMELKKREEAAAAEQA 310
Query: 392 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
+ TDI WG+QIR+YVL PY++VKDLRT P VL+GDLD F+ + L+
Sbjct: 311 ARTDIGWGHQIRSYVLQPYQLVKDLRTGVTSGTPQEVLDGDLDPFMEAALA 361
>gi|414341845|ref|YP_006983366.1| peptide chain release factor 2 [Gluconobacter oxydans H24]
gi|411027180|gb|AFW00435.1| peptide chain release factor 2 [Gluconobacter oxydans H24]
Length = 322
Score = 323 bits (829), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 154/307 (50%), Positives = 221/307 (71%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE +L +++ V+ EQ++ +++++LA ENDT+L E++ L + + +++E+++
Sbjct: 2 RERTTLANQIEGVQQIEQDVEGTLELVELAEMENDTDLVQEAITTLRGLAAEVQKREIES 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D CY+EV AGAGGTE+ DWA M+L+MY WA++ GY+VT ++ GE AGIK
Sbjct: 62 LLSGEADSNDCYVEVNAGAGGTEAQDWAEMILRMYTRWAEQHGYKVTFIESSEGEQAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI++ G A+G+ K E GVHRLVRISPFD+ RR TSFA+V V P D S V+IN+
Sbjct: 122 SATIQISGHNAYGWMKTEAGVHRLVRISPFDAAARRQTSFASVWVYPVV-DDSIEVEIND 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SDLR++ FR+ GAGGQH N TDSA+RI HIPTGI CQ +RSQH+N+A AM +L++R+
Sbjct: 181 SDLRVDTFRASGAGGQHVNKTDSAIRITHIPTGIVVACQTDRSQHRNRAKAMEMLKARMY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ ++ A+ + TDI WG+QIR+YVL PY++VKDLRT E +PD+VL+G LD
Sbjct: 241 EAELQKREAAAAQTEAAKTDIGWGHQIRSYVLAPYQLVKDLRTGVEKGNPDAVLDGALDD 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMSASLA 307
>gi|220925876|ref|YP_002501178.1| hypothetical protein Mnod_6050 [Methylobacterium nodulans ORS 2060]
gi|219950483|gb|ACL60875.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060]
Length = 375
Score = 323 bits (829), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 167/353 (47%), Positives = 234/353 (66%), Gaps = 3/353 (0%)
Query: 91 AIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKA 150
A QSI ++++ L W + RL L+A P LW+DP A ++ RE L + ++
Sbjct: 11 AAKQSIGLLRRHLDWDTADKRLAELNARSEDPALWNDPEAAQKVMRERTQLEEAVSAIRR 70
Query: 151 FEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEV 210
EQ L + +I+L E D E E + ++ ++ ++++ LL+GE D Y+EV
Sbjct: 71 LEQGLEDAATLIELGEMEGDEASIREGEEQIRAVQAEAARRQIETLLAGEADGNDTYLEV 130
Query: 211 QAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYA 270
AGAGGTES DWA+M+ +MY WA+RR Y+V +++ GE AGIK AT+ + G A+G+
Sbjct: 131 HAGAGGTESQDWANMLHRMYARWAERRKYKVEIVEWSEGEEAGIKGATLLIKGHNAYGWL 190
Query: 271 KAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGG 330
K E GVHRLVRISP+DS RRHTSFA+V V P D T +++ ESD RI+ +RS GAGG
Sbjct: 191 KTESGVHRLVRISPYDSNARRHTSFASVWVYPVIDDRIT-IEVKESDCRIDTYRSSGAGG 249
Query: 331 QHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI-ARQAQMNAEH 389
QH NTTDSAVRI HIPTGI CQ ERSQH+N+A+A +L++R+ +LE+ R+ + NAE
Sbjct: 250 QHVNTTDSAVRITHIPTGIVVACQQERSQHKNRATAWNMLRARLYELELKKREEKANAE- 308
Query: 390 TQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
S TDI WG+QIR+YVL PY++VKDLRT + + P VL+G++D FI + L+
Sbjct: 309 AASKTDIGWGHQIRSYVLQPYQLVKDLRTGAQSTSPGDVLDGEIDPFIEASLA 361
>gi|103488652|ref|YP_618213.1| peptide chain release factor 2 [Sphingopyxis alaskensis RB2256]
gi|98978729|gb|ABF54880.1| bacterial peptide chain release factor 2 (bRF-2) [Sphingopyxis
alaskensis RB2256]
Length = 375
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 167/355 (47%), Positives = 239/355 (67%), Gaps = 1/355 (0%)
Query: 88 HAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKE 147
H I ++ ++++ L W RL+ L+A++ P LWD+P A + RE L +
Sbjct: 8 HIDKITAALALLRRFLDWDRAVRRLDELNAKVEDPTLWDNPKAAQDVMRERRRLDEAITA 67
Query: 148 VKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCY 207
+A E+E + ++I+LA E D + E++ +L + +++E ++ ALL+GE D Y
Sbjct: 68 TRAIERECADTAELIELAEMEGDEAMVDEAVASLAALAARAEEDKVKALLAGEADGNDAY 127
Query: 208 IEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAF 267
IEV AGAGGTES DWA M+ +MY WA++RG +V L++ GE AGIK AT+ V GE A+
Sbjct: 128 IEVHAGAGGTESQDWAEMLQRMYMRWAEKRGMKVELIEYQAGEQAGIKSATMLVKGENAY 187
Query: 268 GYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGG 327
GYAK E GVHRLVRISP+DS RRHTSF++V V P D + ++INE DL+I+ +R+ G
Sbjct: 188 GYAKTESGVHRLVRISPYDSSARRHTSFSSVWVYPVI-DDNIEIEINEGDLKIDTYRASG 246
Query: 328 AGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNA 387
AGGQH NTTDSAVRI HIPTGI QN+RSQH+N+A+AMG+L++R+ + E+ ++ +
Sbjct: 247 AGGQHVNTTDSAVRITHIPTGIVVASQNDRSQHKNRATAMGMLKARLYEAELQKREAAAS 306
Query: 388 EHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
Q+ T+I WG+QIR+YVL PY++VKDLRT + P VL+G LD F+ + LS
Sbjct: 307 GEYQAKTEIGWGHQIRSYVLQPYQLVKDLRTGVTSTAPGDVLDGALDPFMAAALS 361
>gi|126729874|ref|ZP_01745687.1| peptide chain release factor 2 [Sagittula stellata E-37]
gi|126709993|gb|EBA09046.1| peptide chain release factor 2 [Sagittula stellata E-37]
Length = 374
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 171/358 (47%), Positives = 242/358 (67%), Gaps = 5/358 (1%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
++H I +S+ ++K+RL W+ RL +A + PNLWD+P A ++ R+ SL+ +
Sbjct: 6 QNHVEKIEKSLDLLKQRLGWETAQHRLEEFNARVEDPNLWDNPEAAQKLMRDRQSLVDAL 65
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
+ + +QEL + +++I+L E D E+ ++ AL + S +KEL+ALL GE D
Sbjct: 66 ESYTSLKQELEDQVELIELGEMEEDAEVVADAEAALKALVETSAKKELEALLDGETDGND 125
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
++E++AGAGGTE+ DWA+M+ +MY WA++RG+ V L +E G AGIK AT ++ G+
Sbjct: 126 AFLEIKAGAGGTEACDWANMLARMYVRWAEKRGFEVDLQEEQAGAEAGIKSATYQIKGKN 185
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
A+G+ K+E G HRLVRISPF G R TSFAAV P D + V +N +D+RI+ FRS
Sbjct: 186 AYGWLKSESGTHRLVRISPFGKGT-RETSFAAVGAYPVI-DDNIEVTVNPADIRIDTFRS 243
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ-AQ 384
GAGGQH NTTDSAVRI H PTGI T +E+SQHQN+ AM L+SR+ QLE+ R+ A+
Sbjct: 244 SGAGGQHVNTTDSAVRITHHPTGIVVTS-SEKSQHQNRDIAMKALKSRLYQLELDRRNAE 302
Query: 385 MNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
+NA H ++ D WGNQIR+YVL PY+MVKDLRT YE +D VL+GDLD F+ + L+
Sbjct: 303 VNALH-EAKGDAGWGNQIRSYVLQPYQMVKDLRTQYETADTQGVLDGDLDPFMEATLA 359
>gi|414162831|ref|ZP_11419078.1| peptide chain release factor 2 [Afipia felis ATCC 53690]
gi|410880611|gb|EKS28451.1| peptide chain release factor 2 [Afipia felis ATCC 53690]
Length = 322
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 155/307 (50%), Positives = 217/307 (70%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
+E SL G++ + E+EL + + MI+L END + E+ AL +++ +EL+A
Sbjct: 2 QERTSLEGQLTGIGKVERELEDQVGMIELGEAENDETVVTEAENALKALKKDVARQELEA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+EV AGAGGTES DWASM+L+MY WA+R+G+++ ++E GE AGIK
Sbjct: 62 LLSGEADRFDTYLEVHAGAGGTESQDWASMLLRMYTRWAERKGFKIEYLEETQGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI++ G A+G+ K E GVHRLVRISP+DS RRHTSF+++A+ P D+S + INE
Sbjct: 122 SATIQISGHNAYGWLKTEAGVHRLVRISPYDSNARRHTSFSSIAIFPVV-DNSIKIDINE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD+R++ RSGGAGGQH N T+SAVR+ HIPTG+ CQ RSQH+N+A A +L++R+
Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
++E+ R+ + A + TDI WG+QIR+YVL PY+MVKDLRT + SD VL+GDLD
Sbjct: 241 EIELKRREEQAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLDGDLDE 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMAATLA 307
>gi|296114415|ref|ZP_06833069.1| peptide chain release factor 2 [Gluconacetobacter hansenii ATCC
23769]
gi|295979176|gb|EFG85900.1| peptide chain release factor 2 [Gluconacetobacter hansenii ATCC
23769]
Length = 322
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 156/310 (50%), Positives = 222/310 (71%), Gaps = 1/310 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L +++ V+ E ++ + I++++LA E D ++ E + AL + ++K +E ++
Sbjct: 2 RERTLLANQIEGVQKLEGDVRDTIELVELAEMEGDGDVVAEGVLALRALAEEAKRRETES 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D CY+EV AGAGGTE+ DWA M+L+MY WA++ GY+VTLM+ GE AG+K
Sbjct: 62 LLSGEADGNDCYLEVNAGAGGTEAQDWAEMLLRMYTRWAEQHGYKVTLMESSEGEQAGLK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI+V G A+G+ K E GVHRLVRISPFD+ RR TSFA+V V P D S + INE
Sbjct: 122 SATIQVSGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPVI-DDSIEIDINE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
+DLR++ FR+ GAGGQH N T+SA+RI HIPTGI CQ +RSQH+N+A+AM +L++R+
Sbjct: 181 ADLRVDTFRASGAGGQHVNKTESAIRITHIPTGIVVACQTDRSQHRNRATAMAMLKARMY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ R+ A+ + TDI WG+QIR+YVL PY++VKDLRTN E ++P +VL+GDLD
Sbjct: 241 EQELQRREAAAAQTEAAKTDIGWGHQIRSYVLAPYQLVKDLRTNMEKTNPGAVLDGDLDD 300
Query: 436 FILSYLSASL 445
F+ + L+A +
Sbjct: 301 FMAASLAAQV 310
>gi|114331309|ref|YP_747531.1| peptide chain release factor 2 [Nitrosomonas eutropha C91]
gi|114308323|gb|ABI59566.1| bacterial peptide chain release factor 2 (bRF-2) [Nitrosomonas
eutropha C91]
Length = 348
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 160/332 (48%), Positives = 227/332 (68%), Gaps = 2/332 (0%)
Query: 110 VRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEN 169
VRL L + P +W+DP A + RE SL + +++ +++L + +++++A+EE+
Sbjct: 15 VRLTELERQSEDPAIWNDPARAQELGREKKSLENIVFTLRSIDRQLQDAQELLQIAQEES 74
Query: 170 DTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
D E E + + + +E E + S +DP +C+I++Q+G+GGTE+ DWASM+ +M
Sbjct: 75 DDETLHSISEDVAGLAKTVEEMEFHRMFSDPMDPNNCFIDIQSGSGGTEAQDWASMLERM 134
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y + +RRG V L++E PG++AGIK ATIKV GEYA+GY + E GVHRLVR SPFDSG
Sbjct: 135 YLHYCERRGLAVELLEESPGDVAGIKSATIKVSGEYAYGYLRTETGVHRLVRKSPFDSGN 194
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RRHTSFA+V V P D S + IN +DLR++ +R+ GAGGQH N TDSAVRI HIPTGI
Sbjct: 195 RRHTSFASVFVYPEV-DDSIEIDINPADLRVDTYRASGAGGQHINKTDSAVRITHIPTGI 253
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHP 409
CQ+ RSQH+N+A AM VL+SR+ + E+ ++ + S TDI+WG+QIR+YVL
Sbjct: 254 VVQCQSGRSQHRNRADAMTVLKSRLYEAELRKRNETKQAIEDSKTDIAWGHQIRSYVLDQ 313
Query: 410 YRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
R +KDLRTN EV + +VL+GDLD FI + L
Sbjct: 314 SR-IKDLRTNIEVGNTQAVLDGDLDVFIEASL 344
>gi|15606882|ref|NP_214263.1| peptide chain release factor 2 [Aquifex aeolicus VF5]
gi|6225943|sp|O67695.1|RF2_AQUAE RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|2984119|gb|AAC07656.1| peptide chain release factor RF-2 [Aquifex aeolicus VF5]
Length = 373
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 159/363 (43%), Positives = 238/363 (65%), Gaps = 2/363 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
K + + ++ +KK L + L L L ++++PN W+D A ++ + + +
Sbjct: 7 KGKVEELRKRLEDVKKILSPEKLESELKELDQKMSEPNFWEDQEKAKQVIQRRKWVEETL 66
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
++K E+ + + +++++ EE DTE E + + R +E EL LSGE+D +
Sbjct: 67 NKLKNLEKSVKDLEELVEITSEE-DTETWAMMDEEIKEVERTLRELELKTYLSGEMDAKN 125
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
Y+ +QAGAGGTE+ DWA M+ +MYK WA+++GY V L+D P ++AGIK T+ V G Y
Sbjct: 126 AYLTIQAGAGGTEACDWADMLFRMYKRWAEKKGYEVELIDITPDDVAGIKSVTVLVKGPY 185
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
A+GY K E GVHRLVRISPFD+ RRHTSFAAV+V+P D ++I DL+IE FR+
Sbjct: 186 AYGYLKGEQGVHRLVRISPFDANARRHTSFAAVSVMPQI-DEDIKIEIKPEDLKIETFRA 244
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQM 385
GAGGQ+ N TD+AVRI HIPTGIT +CQ ERSQ+QNK A+ +L++++ QLE+ + +
Sbjct: 245 SGAGGQYVNKTDTAVRITHIPTGITVSCQQERSQYQNKRKALELLKAKLYQLEMKKLEEK 304
Query: 386 NAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
++ TDI WG+QIR+YV HPY+++KDLRT YE + ++V++G++D FI SYL
Sbjct: 305 KKQYEGEKTDIGWGHQIRSYVFHPYKLIKDLRTGYETGNVEAVMDGEIDEFIESYLKWKA 364
Query: 446 DKD 448
K+
Sbjct: 365 QKE 367
>gi|187478021|ref|YP_786045.1| peptide chain release factor 2 [Bordetella avium 197N]
gi|123515203|sp|Q2L224.1|RF2_BORA1 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|115422607|emb|CAJ49132.1| peptide chain release factor 2 [Bordetella avium 197N]
Length = 367
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 162/353 (45%), Positives = 239/353 (67%), Gaps = 4/353 (1%)
Query: 90 AAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVK 149
A A+ Q +++ L + RL++++AEL P +W+DP HA + RE SL ++ +
Sbjct: 14 ADYAEREQALRRYLDYDAKTERLHVVNAELEDPAVWNDPKHAQDLGREKKSLEDVVQTLT 73
Query: 150 AFEQELLEHIDMIKLAREENDTELELESLEA-LLTMRRKSKEKELDALLSGELDPCSCYI 208
Q + + +++ +LA + D + LES+E T + + + E + S DP +C++
Sbjct: 74 ELGQGVADALELFELAAADED-DATLESIENDANTFQERLEGLEFRRMFSNPADPLNCFL 132
Query: 209 EVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFG 268
++QAGAGGTE+ DWASM+L+ Y +A+R+G++ +++E GEIAGIK ATIK++GEYAFG
Sbjct: 133 DIQAGAGGTEAQDWASMLLRQYLKYAERKGFKAEVLEESEGEIAGIKSATIKLEGEYAFG 192
Query: 269 YAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGA 328
Y + E GVHRLVR SPFDS RHTSFA+V V P D S V++N +DLR++ +R+ GA
Sbjct: 193 YLRTETGVHRLVRKSPFDSSGGRHTSFASVFVYPEV-DESFEVEVNPADLRVDTYRASGA 251
Query: 329 GGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAE 388
GGQH N TDSAVRI H+P+GI CQN+RSQH+N+A AM +L+S++ +LE+ ++ +
Sbjct: 252 GGQHINKTDSAVRITHMPSGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRKRMAEQQK 311
Query: 389 HTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
S TD+ WG+QIR+YVL R +KDLRTN E+S+ VL+GDLD FI + L
Sbjct: 312 LEDSKTDVGWGHQIRSYVLDQSR-IKDLRTNVEISNTQKVLDGDLDPFIQASL 363
>gi|302383300|ref|YP_003819123.1| hypothetical protein Bresu_2190 [Brevundimonas subvibrioides ATCC
15264]
gi|302193928|gb|ADL01500.1| conserved hypothetical protein [Brevundimonas subvibrioides ATCC
15264]
Length = 373
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 166/367 (45%), Positives = 231/367 (62%), Gaps = 1/367 (0%)
Query: 84 DWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
D ++ A I QS+ ++++RL W N +L+ L+A + P LW+DP A +SRE L
Sbjct: 4 DVEAMKADIEQSVALLRRRLDWDVANRKLDELNARVEDPTLWNDPDAAQAVSRERSRLKT 63
Query: 144 KMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDP 203
++ V E L E + + +A EE D E+ AL ++ ++ EL+ALLSGE D
Sbjct: 64 QIDTVLEMESGLEEGVMLADMADEEGDEATLEEARAALKAIKDRASRAELEALLSGEADG 123
Query: 204 CSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDG 263
Y+EV +GAGGTES DWA M+L+MY WA+ GY V + G+ AGIK ATI V G
Sbjct: 124 NDAYLEVNSGAGGTESCDWAGMLLRMYSRWAKAHGYEVQIEASEDGDQAGIKSATILVTG 183
Query: 264 EYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERF 323
A+G+ K+E GVHRLVRISP+D+ +RHTSFA+V V P D + + IN +D+R + +
Sbjct: 184 PNAYGWLKSESGVHRLVRISPYDAAAKRHTSFASVGVSPVV-DDTIEIDINPADVRTDTY 242
Query: 324 RSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQA 383
R+ G+GGQH N TDSAVR+ HIPT CQ RSQHQN+ A +L+ R+ +LE+ ++
Sbjct: 243 RASGSGGQHINKTDSAVRLTHIPTNTVVACQAGRSQHQNREQAWKMLRGRLYELELQKRE 302
Query: 384 QMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSA 443
+ TDI WG+QIR+YVL PY+MVKDLRT E SD VL+GDLD F+ + L+A
Sbjct: 303 AAAQALADAKTDIGWGHQIRSYVLQPYQMVKDLRTEVETSDTQGVLDGDLDAFMGAALAA 362
Query: 444 SLDKDEG 450
+ + G
Sbjct: 363 RVGETRG 369
>gi|421870204|ref|ZP_16301839.1| Peptide chain release factor 2 [Burkholderia cenocepacia H111]
gi|358069730|emb|CCE52717.1| Peptide chain release factor 2 [Burkholderia cenocepacia H111]
Length = 391
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 158/332 (47%), Positives = 226/332 (68%), Gaps = 2/332 (0%)
Query: 110 VRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEN 169
RL ++ EL PN+WDD +A + RE L G + + A + +L + +D+ +LAREE
Sbjct: 58 ARLTEVNKELEDPNVWDDSKNAQALGREKKLLEGVVTTLTALDSDLRDALDLFELAREEG 117
Query: 170 DTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
D + L S E + + + E + S DP +C+I++QAGAGGTE+ DWASM+L+
Sbjct: 118 DEDTLLASEEDAAKLEARVGDIEFRRMFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQ 177
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y + +R+G++ +++E G++AGIK AT+KV GEYA+G+ + E G+HRLVR SPFDS
Sbjct: 178 YLRYCERKGFKAEVLEESDGDVAGIKNATVKVTGEYAYGFLRTETGIHRLVRKSPFDSSG 237
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RHTSF++V V P D S V+IN +DLRI+ +R+ GAGGQH N TDSAVRI H+PTGI
Sbjct: 238 GRHTSFSSVFVYPEI-DDSIEVEINPADLRIDTYRASGAGGQHINKTDSAVRITHMPTGI 296
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHP 409
CQN+RSQH+N+A AM +L+SR+ ++E+ ++ + S TD+ WG+QIR+YVL
Sbjct: 297 VVQCQNDRSQHRNRAEAMAMLKSRLYEVEMRKRQAEQDKLESSKTDVGWGHQIRSYVLDQ 356
Query: 410 YRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
R VKDLRTN E+S+ +VL+GDLD FI + L
Sbjct: 357 SR-VKDLRTNVEMSNTRAVLDGDLDDFISASL 387
>gi|317051343|ref|YP_004112459.1| peptide chain release factor 2 [Desulfurispirillum indicum S5]
gi|316946427|gb|ADU65903.1| Peptide chain release factor 2 [Desulfurispirillum indicum S5]
Length = 367
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 165/358 (46%), Positives = 232/358 (64%), Gaps = 3/358 (0%)
Query: 84 DWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
D++ A+ + ++ ++ L RL L + P LW+DP A I RE L
Sbjct: 4 DFQPRIDAMEEKVEFFRRCLDVPAKEERLAELVPMIEDPTLWNDPQQAQGILREDKMLKD 63
Query: 144 KMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDP 203
+ + + LLE + ++ +E+++ ++ E + L + + + EL LLS E DP
Sbjct: 64 ALADFNEIHR-LLEDVKVLHEFCQEDESNVD-ELTQNLAKLEKLVADYELTVLLSDEHDP 121
Query: 204 CSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDG 263
+ Y+ + AGAGGTES DW SM+++MY WA++R ++VT+M+ GE AGIK T+ ++G
Sbjct: 122 SNAYLTINAGAGGTESQDWGSMLMRMYTRWAEKRKFKVTIMEYQEGEEAGIKSVTLFIEG 181
Query: 264 EYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERF 323
YA+G K+E GVHRLVRISPFDS RRHTSF +V V P D S V I ESDLRI+ +
Sbjct: 182 LYAYGNLKSETGVHRLVRISPFDSNARRHTSFTSVFVSPEI-DDSIEVDIRESDLRIDTY 240
Query: 324 RSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQA 383
RS GAGGQH NTTDSAVRI H PTG+ CQ+ERSQHQNK AM +L++++ +LE+ ++
Sbjct: 241 RSSGAGGQHVNTTDSAVRITHTPTGVVTQCQSERSQHQNKEQAMKMLRAKLYELELEKKR 300
Query: 384 QMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
Q E S DI+WG+QIR+YVLHPY+MVKDLRT +E + ++VL+G LD FI +YL
Sbjct: 301 QGLREVEDSKMDIAWGSQIRSYVLHPYKMVKDLRTRHETGNAEAVLDGALDEFIKAYL 358
>gi|92117370|ref|YP_577099.1| peptide chain release factor 2 [Nitrobacter hamburgensis X14]
gi|91800264|gb|ABE62639.1| bacterial peptide chain release factor 2 (bRF-2) [Nitrobacter
hamburgensis X14]
Length = 322
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 158/307 (51%), Positives = 215/307 (70%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
+E SL + + E+EL + I MI+L END + +S AL ++++ +EL+A
Sbjct: 2 QERTSLEDSLTGIGKVERELEDQIGMIELGEAENDQAIVNDSENALKNLKKEVARRELEA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D + Y+EV AGAGGTES DWASM+L+MY WA++RG+++ ++E PGE AGIK
Sbjct: 62 LLSGEADRFNTYLEVHAGAGGTESQDWASMLLRMYARWAEKRGFKIEYLEETPGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI+V G A+G+ K E GVHRLVRISPFDS RRHTSF++VA+ P D S + I E
Sbjct: 122 SATIQVSGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVAIFPVV-DDSIKIDIKE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD+R + RSGGAGGQH N T+SAVR+ HIPTG+ CQ RSQH+N+A A +L++R+
Sbjct: 181 SDVRTDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
Q+E+ ++ + A + TDI WG+QIR+YVL PY+MVKDLRT + SD VL+GDLD
Sbjct: 241 QIELKKREEQAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLDGDLDE 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMAATLA 307
>gi|85708766|ref|ZP_01039832.1| protein chain release factor B [Erythrobacter sp. NAP1]
gi|85690300|gb|EAQ30303.1| protein chain release factor B [Erythrobacter sp. NAP1]
Length = 375
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 161/358 (44%), Positives = 239/358 (66%), Gaps = 3/358 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
++H I ++ ++++ L W+ RL+ L+A + P LWDDP A +ISRE L +
Sbjct: 6 QAHIDRIEAALALVRQSLDWERALRRLDELNARVQDPTLWDDPKEAQKISREQKQLEDAV 65
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
V E+ + ++ I++ E + + + L++L + ++ ++ ALLSGE D
Sbjct: 66 NTVNEISAEMGDAVEFIEMGEAEGEESIVNDGLKSLEKLAARADADKVQALLSGEADGND 125
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
Y+E+ AGAGGTES DWA M+ +MY WA+RRG++V ++ G+ AGIK AT+ + G+
Sbjct: 126 TYLEIHAGAGGTESQDWAEMLFRMYGRWAERRGFKVETVEYQAGDQAGIKSATLLLKGDN 185
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
A+GYAK E GVHRLVRISP+DS +RHTSF++V V P ++IN +DL+I+ +R+
Sbjct: 186 AYGYAKTESGVHRLVRISPYDSAAKRHTSFSSVWVYPVID-DDIDIEINPADLKIDTYRA 244
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIA-RQAQ 384
GAGGQH NTTDSAVRI H PTGI QN+RSQH+N+A+AM +L++R+ + E+A R+A
Sbjct: 245 SGAGGQHVNTTDSAVRITHQPTGIVVASQNDRSQHKNRATAMNMLKARLFEREMAEREAA 304
Query: 385 MNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
+ E+ Q ++I WG+QIR+YVL PY+MVKDLRT S PD VL+GD+D +I + L+
Sbjct: 305 ASGEY-QEKSEIGWGHQIRSYVLQPYQMVKDLRTGVTSSSPDRVLDGDIDDYISAALA 361
>gi|77463535|ref|YP_353039.1| peptide chain release factor 2 [Rhodobacter sphaeroides 2.4.1]
gi|332558415|ref|ZP_08412737.1| peptide chain release factor 2 [Rhodobacter sphaeroides WS8N]
gi|429209053|ref|ZP_19200293.1| Peptide chain release factor 2 [Rhodobacter sp. AKP1]
gi|77387953|gb|ABA79138.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodobacter
sphaeroides 2.4.1]
gi|332276127|gb|EGJ21442.1| peptide chain release factor 2 [Rhodobacter sphaeroides WS8N]
gi|428187939|gb|EKX56511.1| Peptide chain release factor 2 [Rhodobacter sp. AKP1]
Length = 375
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 167/368 (45%), Positives = 241/368 (65%), Gaps = 8/368 (2%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
++ AI +S+ ++ +R+ + RL A + NLW+DP A ++ RE LM ++
Sbjct: 6 QNQVEAIRRSLALLGQRMDLETAPHRLEEFDAMIEDGNLWNDPARAQKLMRERQQLMDQL 65
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
+ + L +++++I+L E D E+ E+ ++ + ++ KEL+ALL GE D
Sbjct: 66 STYRLIDTGLRDNVELIELGEAEGDEEIVTEAEASIRALVETARAKELEALLDGEADGND 125
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
++E+ AGAGGTES DWASM+ +MY WA+R+GY+V L E GE AGIK A K+ G
Sbjct: 126 TFLEINAGAGGTESCDWASMLARMYVRWAERKGYKVELQSESAGEEAGIKSAAYKISGPN 185
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
A+G+ K+E GVHRLVRISP+DS RRHTSF++V V P D + ++I +D+RI+ +RS
Sbjct: 186 AYGWLKSESGVHRLVRISPYDSAARRHTSFSSVWVYPVV-DDNIEIEIPANDIRIDTYRS 244
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI-ARQAQ 384
GAGGQH NTTDSAVRI H+PT I T + +SQHQN+ +AM L++R+ QLE+ R A
Sbjct: 245 SGAGGQHVNTTDSAVRITHLPTNIVVTS-SMKSQHQNREAAMNALKARLYQLELDKRNAA 303
Query: 385 MNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSAS 444
+NA+H ++ + WGNQIR+YVL PY+MVKDLRT E SD VL+GDLD F + A+
Sbjct: 304 INAQH-EAKGEAGWGNQIRSYVLQPYQMVKDLRTGVETSDTQGVLDGDLDRF----MQAT 358
Query: 445 LDKDEGGQ 452
L +D G+
Sbjct: 359 LAQDVAGK 366
>gi|424874825|ref|ZP_18298487.1| peptide chain release factor 2 [Rhizobium leguminosarum bv. viciae
WSM1455]
gi|393170526|gb|EJC70573.1| peptide chain release factor 2 [Rhizobium leguminosarum bv. viciae
WSM1455]
Length = 376
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 167/349 (47%), Positives = 239/349 (68%), Gaps = 1/349 (0%)
Query: 94 QSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQ 153
Q+I ++++ L W RL+ L+ + PNLW+D A ++ RE L + VK EQ
Sbjct: 14 QAITLLRRHLDWDQAIRRLDWLNNKAEDPNLWNDASEAQKLMRERQQLDDGINGVKQLEQ 73
Query: 154 ELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAG 213
+L ++I++I+L EE D + E+ +AL ++ ++ ++++A+LSGE D Y+EV +G
Sbjct: 74 QLNDNIELIELGEEEGDQSVVKEAEDALKALKAEAGRRQVEAMLSGEADGNDTYLEVHSG 133
Query: 214 AGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAE 273
AGGTES DWA+M+L+MY WA+R+ ++V L++ GE AGIK AT+ V G A+G+ K E
Sbjct: 134 AGGTESQDWANMLLRMYTRWAERQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWLKTE 193
Query: 274 VGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHA 333
GVHRLVRISP+DS RRHTSF+++ V P D S ++INESD RI+ +RS GAGGQH
Sbjct: 194 SGVHRLVRISPYDSNARRHTSFSSIWVYP-VVDDSIQIEINESDCRIDTYRSSGAGGQHV 252
Query: 334 NTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSL 393
NTTDSAVRI HIPTGI CQ ERSQH+N+A A +L++R+ + E+ ++ + S
Sbjct: 253 NTTDSAVRITHIPTGIVVQCQQERSQHKNRAKAWDMLRARMYEAELKKREDAASAEAASK 312
Query: 394 TDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
T+I WG+QIR+YVL PY+MVKDLRT S PD VL+GDL+ F+ + L+
Sbjct: 313 TEIGWGHQIRSYVLQPYQMVKDLRTGVASSAPDDVLDGDLNEFMEAALA 361
>gi|85715460|ref|ZP_01046441.1| peptide chain release factor 2 [Nitrobacter sp. Nb-311A]
gi|85697655|gb|EAQ35531.1| peptide chain release factor 2 [Nitrobacter sp. Nb-311A]
Length = 322
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 157/307 (51%), Positives = 214/307 (69%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
+E SL + + E+EL + I MI+L END + ES AL T+R++ +EL+A
Sbjct: 2 QERTSLEDSLTGIGKVERELEDQIGMIELGEAENDQAVITESENALKTLRKEVARRELEA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+EV AGAGGTES DWA M+L+MY WA++RG++V ++E PGE AGIK
Sbjct: 62 LLSGEADRFDTYLEVHAGAGGTESQDWAQMLLRMYARWAEKRGFKVEYLEETPGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
AT+++ G A+G+ K E GVHRLVRISPFDS RRHTSF++VA+ P D S + I E
Sbjct: 122 SATVQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVAIFPVV-DDSIKIDIKE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD+R + RSGGAGGQH N T+SAVR+ HIPTG+ CQ RSQH+N+A A +L++R+
Sbjct: 181 SDVRTDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
++E+ ++ + A + T+I WG+QIR+YVL PY+MVKDLRT + SD VL+GDLD
Sbjct: 241 EIELKKREEQAAADQAAKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLDGDLDE 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMAATLA 307
>gi|393771841|ref|ZP_10360309.1| peptide chain release factor RF-2 [Novosphingobium sp. Rr 2-17]
gi|392722852|gb|EIZ80249.1| peptide chain release factor RF-2 [Novosphingobium sp. Rr 2-17]
Length = 375
Score = 321 bits (823), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 162/358 (45%), Positives = 231/358 (64%), Gaps = 3/358 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
++H A I +++ +++K L W R + L+A + P LWD P A + +E L +
Sbjct: 6 QAHIARIEKALALVRKFLDWDRALRRFDELNARVEDPTLWDKPKEAEAVMKERRRLEASI 65
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
V + +E+ + ++ ++L E+D E L +L + ++ ++ ALL+GE D
Sbjct: 66 NAVTSISREMADAVEFVELGEMEDDEATVNEGLASLAALAERADADKVQALLAGEADAND 125
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
Y+EV AGAGGTES DWA M+ +MY WA+R GY+V ++D GE AGIK T+ + GE
Sbjct: 126 TYLEVHAGAGGTESQDWAEMLQRMYTRWAERHGYKVEMVDYHAGEAAGIKSCTLLIKGEN 185
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
A+GYAK E GVHRLVRISP+DS RRHTSF++V V P D S ++IN SDL+I+ +R+
Sbjct: 186 AYGYAKTESGVHRLVRISPYDSSARRHTSFSSVWVYPVI-DDSFEIEINPSDLKIDTYRA 244
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI-ARQAQ 384
GAGGQH NTTDSAVRI H P+GI Q +RSQH+N+ AMG+L++R+ + E+ R+
Sbjct: 245 SGAGGQHVNTTDSAVRITHQPSGIVVASQIDRSQHKNREIAMGMLKARIFEAEMQKREEA 304
Query: 385 MNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
+AEH +DI WG+QIR+YVL PY+ VKDLRT + P VL+G LD F+ + LS
Sbjct: 305 ASAEHANK-SDIGWGHQIRSYVLQPYQQVKDLRTGVVSTAPGDVLDGALDPFMAAALS 361
>gi|206560551|ref|YP_002231316.1| peptide chain release factor 2 [Burkholderia cenocepacia J2315]
gi|238693117|sp|B4EDB1.1|RF2_BURCJ RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|198036593|emb|CAR52490.1| peptide chain release factor 2 [Burkholderia cenocepacia J2315]
Length = 367
Score = 321 bits (822), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 161/347 (46%), Positives = 232/347 (66%), Gaps = 6/347 (1%)
Query: 99 IKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEH 158
++ L + RL ++ EL PN+W+D +A + RE L G + + A + +L +
Sbjct: 23 LRGYLDYDAKAARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLTALDSDLRDA 82
Query: 159 IDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTE 218
+D+ +LAREE D + L S E + + + E + S DP +C+I++QAGAGGTE
Sbjct: 83 LDLFELAREEGDEDTLLASEEDAAKLEARVGDIEFRRMFSNPADPNNCFIDIQAGAGGTE 142
Query: 219 SMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHR 278
+ DWASM+L+ Y + +R+G++ +++E G++AGIK AT+KV GEYA+G+ + E G+HR
Sbjct: 143 ACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATVKVTGEYAYGFLRTETGIHR 202
Query: 279 LVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDS 338
LVR SPFDS RHTSF++V V P D S V+IN +DLRI+ +R+ GAGGQH N TDS
Sbjct: 203 LVRKSPFDSSGGRHTSFSSVFVYPEI-DDSIEVEINPADLRIDTYRASGAGGQHINKTDS 261
Query: 339 AVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISW 398
AVRI H+PTGI CQN+RSQH+N+A AM +L+SR+ ++E+ ++ + S TD+ W
Sbjct: 262 AVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEVEMRKRQAEQDKLESSKTDVGW 321
Query: 399 GNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
G+QIR+YVL R VKDLRTN E+S+ +VL+GDLD FI SASL
Sbjct: 322 GHQIRSYVLDQSR-VKDLRTNVEMSNTRAVLDGDLDDFI----SASL 363
>gi|424881103|ref|ZP_18304735.1| peptide chain release factor 2 [Rhizobium leguminosarum bv.
trifolii WU95]
gi|392517466|gb|EIW42198.1| peptide chain release factor 2 [Rhizobium leguminosarum bv.
trifolii WU95]
Length = 376
Score = 321 bits (822), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 166/349 (47%), Positives = 239/349 (68%), Gaps = 1/349 (0%)
Query: 94 QSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQ 153
Q+I ++++ L W RL+ L+ + PNLW+D A ++ RE L + VK EQ
Sbjct: 14 QAITLLRRHLDWDQAIRRLDWLNNKAEDPNLWNDASEAQKLMRERQQLDDGINGVKQLEQ 73
Query: 154 ELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAG 213
+L ++I++I+L EE D + E+ ++L ++ ++ ++++A+LSGE D Y+EV +G
Sbjct: 74 QLNDNIELIELGEEEGDQSVVKEAEDSLKALKAEAARRQVEAMLSGEADGNDTYLEVHSG 133
Query: 214 AGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAE 273
AGGTES DWA+M+L+MY WA+R+ ++V L++ GE AGIK AT+ V G A+G+ K E
Sbjct: 134 AGGTESQDWANMLLRMYTRWAERQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWLKTE 193
Query: 274 VGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHA 333
GVHRLVRISP+DS RRHTSF+++ V P D S ++INESD RI+ +RS GAGGQH
Sbjct: 194 SGVHRLVRISPYDSNARRHTSFSSIWVYP-VVDDSIQIEINESDCRIDTYRSSGAGGQHV 252
Query: 334 NTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSL 393
NTTDSAVRI HIPTGI CQ ERSQH+N+A A +L++R+ + E+ ++ + S
Sbjct: 253 NTTDSAVRITHIPTGIVVQCQQERSQHKNRAKAWDMLRARMYEAELKKREDAASAEAASK 312
Query: 394 TDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
T+I WG+QIR+YVL PY+MVKDLRT S PD VL+GDL+ F+ + L+
Sbjct: 313 TEIGWGHQIRSYVLQPYQMVKDLRTGVASSAPDDVLDGDLNEFMEAALA 361
>gi|241204131|ref|YP_002975227.1| peptide chain release factor 2 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240858021|gb|ACS55688.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 376
Score = 321 bits (822), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 166/349 (47%), Positives = 238/349 (68%), Gaps = 1/349 (0%)
Query: 94 QSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQ 153
Q+I ++++ L W RL+ L+ + PNLW+D A ++ RE L + VK EQ
Sbjct: 14 QAITLLRRHLDWDQAIRRLDWLNNKAEDPNLWNDASEAQKLMRERQQLDDGINGVKQLEQ 73
Query: 154 ELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAG 213
+L ++I++I+L EE D + E+ + L ++ ++ ++++A+LSGE D Y+EV +G
Sbjct: 74 QLNDNIELIELGEEEGDQSVVKEAEDTLKALKAEAARRQVEAMLSGEADGNDTYLEVHSG 133
Query: 214 AGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAE 273
AGGTES DWA+M+L+MY WA+R+ ++V L++ GE AGIK AT+ V G A+G+ K E
Sbjct: 134 AGGTESQDWANMLLRMYTRWAERQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWLKTE 193
Query: 274 VGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHA 333
GVHRLVRISP+DS RRHTSF+++ V P D S ++INESD RI+ +RS GAGGQH
Sbjct: 194 SGVHRLVRISPYDSNARRHTSFSSIWVYP-VVDDSIQIEINESDCRIDTYRSSGAGGQHV 252
Query: 334 NTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSL 393
NTTDSAVRI HIPTGI CQ ERSQH+N+A A +L++R+ + E+ ++ + S
Sbjct: 253 NTTDSAVRITHIPTGIVVQCQQERSQHKNRAKAWDMLRARMYEAELKKREDAASAEAASK 312
Query: 394 TDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
T+I WG+QIR+YVL PY+MVKDLRT S PD VL+GDL+ F+ + L+
Sbjct: 313 TEIGWGHQIRSYVLQPYQMVKDLRTGVASSAPDDVLDGDLNEFMEAALA 361
>gi|374583718|ref|ZP_09656812.1| peptide chain release factor 2 [Desulfosporosinus youngiae DSM
17734]
gi|374419800|gb|EHQ92235.1| peptide chain release factor 2 [Desulfosporosinus youngiae DSM
17734]
Length = 368
Score = 321 bits (822), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 162/361 (44%), Positives = 236/361 (65%)
Query: 84 DWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
DWK + S+ ++ L +++ L E ++P+LWDDPV+A +I +E G
Sbjct: 4 DWKKELETLEMSLADLRVSLDVAKRRDKISALETEFHRPDLWDDPVNAQKIMQELSLHQG 63
Query: 144 KMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDP 203
K+K + +QEL E + +LA EE+D LE + + + ++++ + EL+ LLSG D
Sbjct: 64 KVKTYEELKQELEETSTLWQLAVEEDDVSLEPDIEQGIEALKQRFEALELELLLSGPYDR 123
Query: 204 CSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDG 263
+ + + AGAGGTE+ DW M+ ++Y W +R GY+V +D + GE AGIK AT+ G
Sbjct: 124 NNAILTLHAGAGGTEAQDWVQMLYRLYIRWGERHGYKVETLDFLHGEEAGIKSATLSFSG 183
Query: 264 EYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERF 323
E A+GYAK+E GVHRLVRISPFD+ RRHTSFA+V VIP + + + I+ DLRI+ +
Sbjct: 184 ENAYGYAKSEKGVHRLVRISPFDASGRRHTSFASVDVIPEVAEDNDEIPIDAEDLRIDTY 243
Query: 324 RSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQA 383
RSGGAGGQH N TDSA+RI H+PTGI CQ+ERSQ QNKA+AM VLQ+++ +L+ Q
Sbjct: 244 RSGGAGGQHVNKTDSAIRITHLPTGIVVQCQSERSQTQNKAAAMRVLQAKLLELKRKEQE 303
Query: 384 QMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSA 443
+E +I+WG+QIR+YV HPY +VKD RTN E + +V++G++D FI ++L
Sbjct: 304 AEISEIRGEQQEIAWGSQIRSYVFHPYSLVKDHRTNVETGNVSAVMDGEIDAFIAAFLQK 363
Query: 444 S 444
+
Sbjct: 364 T 364
>gi|126462391|ref|YP_001043505.1| peptide chain release factor 2 [Rhodobacter sphaeroides ATCC 17029]
gi|126104055|gb|ABN76733.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodobacter
sphaeroides ATCC 17029]
Length = 375
Score = 320 bits (821), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 167/368 (45%), Positives = 240/368 (65%), Gaps = 8/368 (2%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
++ AI +S+ ++ +R+ + RL A + NLW+DP A ++ RE LM ++
Sbjct: 6 QNQVEAIRRSLALLGQRMDLETAPHRLEEFDAMIEDGNLWNDPARAQKLMRERQQLMDQL 65
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
+ + L +++++I+L E D E+ E+ ++ + + KEL+ALL GE D
Sbjct: 66 STYRLIDTGLRDNVELIELGEAEGDEEIVTEAEASIRALVETAGAKELEALLDGEADGND 125
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
++E+ AGAGGTES DWASM+ +MY WA+R+GY+V L E GE AGIK A K+ G
Sbjct: 126 TFLEINAGAGGTESCDWASMLARMYVRWAERKGYKVELQSESAGEEAGIKSAAYKISGPN 185
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
A+G+ K+E GVHRLVRISP+DS RRHTSF++V V P D + ++I +D+RI+ +RS
Sbjct: 186 AYGWLKSESGVHRLVRISPYDSAARRHTSFSSVWVYPVV-DDNIEIEIPANDIRIDTYRS 244
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI-ARQAQ 384
GAGGQH NTTDSAVRI H+PT I T + +SQHQN+ +AM L++R+ QLE+ R A
Sbjct: 245 SGAGGQHVNTTDSAVRITHLPTNIVVTS-SMKSQHQNREAAMNALKARLYQLELDKRNAA 303
Query: 385 MNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSAS 444
+NA+H ++ + WGNQIR+YVL PY+MVKDLRT E SD VL+GDLD F + A+
Sbjct: 304 INAQH-EAKGEAGWGNQIRSYVLQPYQMVKDLRTGVETSDTQGVLDGDLDRF----MQAT 358
Query: 445 LDKDEGGQ 452
L +D G+
Sbjct: 359 LAQDVAGK 366
>gi|444360903|ref|ZP_21162066.1| peptide chain release factor 2 [Burkholderia cenocepacia BC7]
gi|444372627|ref|ZP_21172067.1| peptide chain release factor 2 [Burkholderia cenocepacia
K56-2Valvano]
gi|443593214|gb|ELT61967.1| peptide chain release factor 2 [Burkholderia cenocepacia
K56-2Valvano]
gi|443599015|gb|ELT67326.1| peptide chain release factor 2 [Burkholderia cenocepacia BC7]
Length = 391
Score = 320 bits (821), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 157/332 (47%), Positives = 226/332 (68%), Gaps = 2/332 (0%)
Query: 110 VRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEN 169
RL ++ EL PN+W+D +A + RE L G + + A + +L + +D+ +LAREE
Sbjct: 58 ARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLTALDSDLRDALDLFELAREEG 117
Query: 170 DTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
D + L S E + + + E + S DP +C+I++QAGAGGTE+ DWASM+L+
Sbjct: 118 DEDTLLASEEDAAKLEARVGDIEFRRMFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQ 177
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y + +R+G++ +++E G++AGIK AT+KV GEYA+G+ + E G+HRLVR SPFDS
Sbjct: 178 YLRYCERKGFKAEVLEESDGDVAGIKNATVKVTGEYAYGFLRTETGIHRLVRKSPFDSSG 237
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RHTSF++V V P D S V+IN +DLRI+ +R+ GAGGQH N TDSAVRI H+PTGI
Sbjct: 238 GRHTSFSSVFVYPEI-DDSIEVEINPADLRIDTYRASGAGGQHINKTDSAVRITHMPTGI 296
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHP 409
CQN+RSQH+N+A AM +L+SR+ ++E+ ++ + S TD+ WG+QIR+YVL
Sbjct: 297 VVQCQNDRSQHRNRAEAMAMLKSRLYEVEMRKRQAEQDKLESSKTDVGWGHQIRSYVLDQ 356
Query: 410 YRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
R VKDLRTN E+S+ +VL+GDLD FI + L
Sbjct: 357 SR-VKDLRTNVEMSNTRAVLDGDLDDFISASL 387
>gi|117924338|ref|YP_864955.1| peptide chain release factor 2 [Magnetococcus marinus MC-1]
gi|117608094|gb|ABK43549.1| bacterial peptide chain release factor 2 (bRF-2) [Magnetococcus
marinus MC-1]
Length = 379
Score = 320 bits (821), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 161/359 (44%), Positives = 236/359 (65%), Gaps = 1/359 (0%)
Query: 91 AIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKA 150
AI + + +++ L ++ RL+ L + PNLW D A + E L + E A
Sbjct: 19 AIGEKLTLLRGHLNYEQGKERLSELESLAQDPNLWGDSERARTVMTEKNRLEKTIGEWDA 78
Query: 151 FEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEV 210
E + D++++A+EE D+ + E + + ++ + EL +LSGE D +C+IE+
Sbjct: 79 LNSESTDARDLLEMAQEEGDSGMIAEVTAQVAAILKRLEGLELARMLSGEADANNCFIEI 138
Query: 211 QAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYA 270
GAGGTES DWAS++L+MY + ++ G++ +D + G+ AGIK TIKV+G+YA+GY
Sbjct: 139 HPGAGGTESQDWASILLRMYLRYCEKSGFKTEEVDYLAGDEAGIKSVTIKVEGDYAYGYL 198
Query: 271 KAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGG 330
K E GVHRLVRISPFDS RRHTSF +V V P D S ++I + DLR++ FR+ GAGG
Sbjct: 199 KVESGVHRLVRISPFDSSARRHTSFTSVNVYPEI-DDSIEIEILDKDLRVDTFRASGAGG 257
Query: 331 QHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHT 390
QH N TDSA+RI H PTGI CQ+ RSQH+N+ AM +L++R+ QLE+ ++A+
Sbjct: 258 QHVNKTDSAIRITHQPTGIVVQCQSGRSQHRNRDEAMKMLRARLFQLEMDKRAEAAQAVA 317
Query: 391 QSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKDE 449
+ +DI+WG+QIR+YVL PYR+VKDLRT+YE + D+VL+G+LDGFI + LS + D+
Sbjct: 318 DAKSDIAWGHQIRSYVLAPYRLVKDLRTSYETGNTDAVLDGELDGFIKAALSQRIVGDD 376
>gi|294677084|ref|YP_003577699.1| peptide chain release factor 2 [Rhodobacter capsulatus SB 1003]
gi|294475904|gb|ADE85292.1| peptide chain release factor 2 [Rhodobacter capsulatus SB 1003]
Length = 375
Score = 320 bits (820), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 159/353 (45%), Positives = 239/353 (67%), Gaps = 4/353 (1%)
Query: 91 AIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKA 150
A+ ++++++ +R+ + RL +A + +LW DP A ++ RE LM K++ +
Sbjct: 11 AVRKTLRLLAQRMDLETAPHRLEEFNAMIEHGDLWSDPARAQKLMRERQMLMDKLETYRR 70
Query: 151 FEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEV 210
+++L ++I++I+L E+D E+ E+ ++L ++ + KEL+ALL GE D ++E+
Sbjct: 71 IDRDLTDNIELIELGEMEDDPEIVAEAEKSLRALKELAAAKELEALLDGEADGNDTFLEI 130
Query: 211 QAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYA 270
AGAGGTES DWASM+ +MY WA+++GY V L E G+ AGI+ K+ G+ A+G+
Sbjct: 131 NAGAGGTESCDWASMLARMYTRWAEKKGYTVELQSETAGDEAGIRSVAYKISGQNAYGWL 190
Query: 271 KAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGG 330
K+E GVHR VRISP+DS RRHTSF++V V P D + + I SD+RI+ +RS GAGG
Sbjct: 191 KSESGVHRQVRISPYDSAARRHTSFSSVWVYP-VVDDNIEIDIPASDIRIDTYRSSGAGG 249
Query: 331 QHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI-ARQAQMNAEH 389
QH NTTDSAVRI H+PT I T + +SQHQN+ +AM L++R+ Q+E+ R A +NA+H
Sbjct: 250 QHVNTTDSAVRITHLPTNIVVTS-SMKSQHQNREAAMNALRARLYQMELDKRNAAINAQH 308
Query: 390 TQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
++ + WGNQIR+YVL PY+MVKDLRT +E SD VL+GDLD F+ + L+
Sbjct: 309 -EAKGEAGWGNQIRSYVLQPYQMVKDLRTGHETSDTQGVLDGDLDAFMAATLA 360
>gi|433775548|ref|YP_007306015.1| peptide chain release factor 2 [Mesorhizobium australicum WSM2073]
gi|433667563|gb|AGB46639.1| peptide chain release factor 2 [Mesorhizobium australicum WSM2073]
Length = 376
Score = 320 bits (820), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 171/361 (47%), Positives = 240/361 (66%), Gaps = 6/361 (1%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
I Q+I ++++ W RL L+ +LW++P+ A ++ RE L + VK
Sbjct: 12 IRQAITLLRRHFDWDQAIKRLEYLNVRAEDASLWNEPLEAQKLMRERQGLEEGIAAVKGL 71
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
Q L ++I +I+L EE D + E+ A+ +M+ ++K ++++ LLSGE D Y+E+
Sbjct: 72 TQALEDNIGLIELGEEEGDEGVVAEAEAAIRSMQGEAKARQVETLLSGEADANDTYLEIH 131
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AGAGGTES DWASM+L+MY WA+RR ++V +++ GE AGIK AT+ + G A+G+ K
Sbjct: 132 AGAGGTESQDWASMLLRMYTRWAERRRFKVEVLEVHDGEEAGIKSATLLIKGHNAYGWMK 191
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
E GVHRLVRISP+DS RRHTSF++V V P D + ++ESD+RI+ +RS G+GGQ
Sbjct: 192 TESGVHRLVRISPYDSNARRHTSFSSVWVYPVV-DDRIEIDVSESDVRIDTYRSSGSGGQ 250
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI-ARQAQMNAEHT 390
H NTTDSAVRI HI TGI CQ ERSQH+NKA A +L+SR+ + E+ R+A NA
Sbjct: 251 HVNTTDSAVRITHIATGIAVACQAERSQHKNKAKAWEMLRSRLYEEELKKREAVANATEA 310
Query: 391 QSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKDEG 450
S +DI WG+QIR+YVL PY++VKDLRT E + P SVL+GDLD F+ + LS + EG
Sbjct: 311 -SKSDIGWGHQIRSYVLQPYQLVKDLRTGVESTSPSSVLDGDLDDFMEASLSQRI---EG 366
Query: 451 G 451
G
Sbjct: 367 G 367
>gi|221198422|ref|ZP_03571468.1| peptide chain release factor 2, programmed frameshift [Burkholderia
multivorans CGD2M]
gi|221208901|ref|ZP_03581898.1| peptide chain release factor 2, programmed frameshift [Burkholderia
multivorans CGD2]
gi|221214768|ref|ZP_03587737.1| peptide chain release factor 2, programmed frameshift [Burkholderia
multivorans CGD1]
gi|221165307|gb|EED97784.1| peptide chain release factor 2, programmed frameshift [Burkholderia
multivorans CGD1]
gi|221171184|gb|EEE03634.1| peptide chain release factor 2, programmed frameshift [Burkholderia
multivorans CGD2]
gi|221182354|gb|EEE14755.1| peptide chain release factor 2, programmed frameshift [Burkholderia
multivorans CGD2M]
Length = 367
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 160/336 (47%), Positives = 226/336 (67%), Gaps = 6/336 (1%)
Query: 110 VRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEN 169
RL ++ EL PN+W+D +A + RE L G + + + +L + +D+ +LAREE
Sbjct: 34 ARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLTELDNDLRDALDLFELAREEG 93
Query: 170 DTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
D + + S E + + + E + S DP +C+I++QAGAGGTE+ DWASM+L+
Sbjct: 94 DEDTLIASEEDAAKLEARVADIEFRRMFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQ 153
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y + +R+G++ +++E G++AGIK ATIKV GEYA+GY + E G+HRLVR SPFDS
Sbjct: 154 YLRYCERKGFKAEVLEESDGDVAGIKNATIKVSGEYAYGYLRTETGIHRLVRKSPFDSSG 213
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RHTSF++V V P D S V+IN +DLRI+ +R+ GAGGQH N TDSAVRI H+PTGI
Sbjct: 214 GRHTSFSSVFVYPEI-DDSIEVEINPADLRIDTYRASGAGGQHINKTDSAVRITHMPTGI 272
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHP 409
CQN+RSQH+N+A AM +L+SR+ + E+ ++ + S TD+ WG+QIR+YVL
Sbjct: 273 VVQCQNDRSQHRNRAEAMAMLKSRLYEAELRKRQAEQDKLESSKTDVGWGHQIRSYVLDQ 332
Query: 410 YRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R VKDLRTN E+S+ +VL+GDLD FI SASL
Sbjct: 333 SR-VKDLRTNVEMSNTKAVLDGDLDDFI----SASL 363
>gi|402819418|ref|ZP_10868986.1| hypothetical protein IMCC14465_02200 [alpha proteobacterium
IMCC14465]
gi|402511565|gb|EJW21826.1| hypothetical protein IMCC14465_02200 [alpha proteobacterium
IMCC14465]
Length = 322
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 153/307 (49%), Positives = 222/307 (72%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L +K V E++L +++DM+++A E D E+ ES A+ + +++ E++
Sbjct: 3 RERTRLDEAIKSVTTVERDLTDNLDMLEMAEAEGDAEIVAESEAAIAQLFSQAERMEVET 62
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE DP Y+EV AGAGGTES DWA+M+L+MY WA+++G++ L++E GE AGIK
Sbjct: 63 LLSGEADPNDSYLEVHAGAGGTESQDWANMLLRMYLRWAEKKGFKTELIEETSGEEAGIK 122
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATIK+ G ++G+AK E GVHRLVRISPFDS RRHTSFA+V P+ D + ++++++
Sbjct: 123 SATIKISGHNSYGWAKTESGVHRLVRISPFDSQSRRHTSFASVWCYPHV-DENINIEVSD 181
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
+D+RI+ FR+ GAGGQH NTTDSAVRI H PTGI CQNERSQH+N+A+A +L++R+
Sbjct: 182 ADVRIDTFRASGAGGQHVNTTDSAVRITHNPTGIVVQCQNERSQHKNRATAWNMLRARLY 241
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
++E+ ++ + +S T+I WG+QIR+YVL PY+MVKDLRT E +P +VL+G LD
Sbjct: 242 EMELKKREDEASAAAESKTEIGWGHQIRSYVLQPYQMVKDLRTGVENGNPQAVLDGLLDP 301
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 302 FMEAALA 308
>gi|372279374|ref|ZP_09515410.1| peptide chain release factor 2 [Oceanicola sp. S124]
Length = 373
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 171/357 (47%), Positives = 238/357 (66%), Gaps = 5/357 (1%)
Query: 90 AAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVK 149
A I +S++++++R+ W+ RL +A + PNLWDDP A + R+ +L+
Sbjct: 10 AEIEKSLELLRQRMDWETAQHRLEEFNARVEDPNLWDDPAKAQALMRDRQALVDAFATHD 69
Query: 150 AFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIE 209
+Q+L ++ID+I+L E D E+ E+ EAL ++ K+ KEL+ALL+GE D ++E
Sbjct: 70 GLKQDLQDNIDLIELGEMEEDDEVVAEAEEALKALKVKAAAKELEALLNGEADANDTFLE 129
Query: 210 VQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGY 269
+ AGAGGTE+ DWASM+ +MY WA++RGY+V L E G AGIK K+ G A+G+
Sbjct: 130 INAGAGGTEACDWASMLQRMYVRWAEKRGYKVELQSEEAGGEAGIKSCAYKISGPNAYGW 189
Query: 270 AKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAG 329
K+E GVHRLVRISPF G R TSFA+V V P D + +++N +D+RI+ FRS GAG
Sbjct: 190 LKSESGVHRLVRISPFGKGT-RETSFASVWVYPVV-DDNIEIEVNPADIRIDTFRSSGAG 247
Query: 330 GQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI-ARQAQMNAE 388
GQH NTTDSAVRI H PTGI T +E+SQHQN+ AM L+SR+ QLE+ R A +N
Sbjct: 248 GQHVNTTDSAVRITHHPTGIVVTS-SEKSQHQNRDIAMKALKSRLYQLELDKRTASINEA 306
Query: 389 HTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
H ++ WGNQIR+YVL PY+MVKDLRT +E SD VL+G LDGF+ + L+ ++
Sbjct: 307 H-ENKGSAGWGNQIRSYVLQPYQMVKDLRTQHETSDTSGVLDGALDGFMAATLAMNV 362
>gi|188997267|ref|YP_001931518.1| peptide chain release factor 2 [Sulfurihydrogenibium sp. YO3AOP1]
gi|229576671|sp|B2V5M0.1|RF2_SULSY RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|188932334|gb|ACD66964.1| peptide chain release factor 2 [Sulfurihydrogenibium sp. YO3AOP1]
Length = 369
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 168/376 (44%), Positives = 240/376 (63%), Gaps = 8/376 (2%)
Query: 77 ILDESEGDWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISR 136
I++E + W+ I + +K+ L+ + L + L + PN W+D A IS
Sbjct: 2 IVEEIKTKWEE----IKEKWDNLKEILKPEKLEEEIKQLDDLMADPNFWNDTKKAQEISS 57
Query: 137 EHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDAL 196
L K++E+ ++++ +D I L E D EL E + L + ++ EL +L
Sbjct: 58 RRNYLGEKLEEILTVDKKVNNLLDYITLLEMEEDQELYNEVEKELKEIEKEISRLELGSL 117
Query: 197 LSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKR 256
LS E+D + + VQAG+GG E+ DW M+L+MY WA++RGY+V L+D P ++AG+K
Sbjct: 118 LSDEMDSKNAILTVQAGSGGVEACDWTEMLLRMYTRWAEKRGYQVELVDFQPDDVAGVKS 177
Query: 257 ATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINES 316
AT+ + G YA+GY K E GVHRLVRISPFD+ KRRHTSF+AV+VIP D V+INE
Sbjct: 178 ATLIIKGPYAYGYLKGEQGVHRLVRISPFDANKRRHTSFSAVSVIPEI-DEDIKVEINEE 236
Query: 317 DLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQ 376
DLRI+ +R+ GAGGQH N TDSAVRI HIPTGI CQ+ERSQ QNK A +L++++ Q
Sbjct: 237 DLRIDTYRASGAGGQHVNKTDSAVRITHIPTGIVVACQSERSQLQNKLKATNMLKAKLYQ 296
Query: 377 LEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGF 436
LE+ ++ + E DI+WG+QIR+YV PY+MVKDLRT +E + ++V++G++D F
Sbjct: 297 LELEKRKEKQKELEGEKKDITWGSQIRSYVFQPYQMVKDLRTGFETGNIEAVMDGEIDDF 356
Query: 437 ILSYLSASLDKDEGGQ 452
I SYL K +GGQ
Sbjct: 357 IESYLKW---KAKGGQ 369
>gi|359401523|ref|ZP_09194491.1| peptide chain release factor RF-2 [Novosphingobium
pentaromativorans US6-1]
gi|357597198|gb|EHJ58948.1| peptide chain release factor RF-2 [Novosphingobium
pentaromativorans US6-1]
Length = 407
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 163/358 (45%), Positives = 231/358 (64%), Gaps = 3/358 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
++H I +++ +++K L W R + L+A + P LWD P A + +E L +
Sbjct: 38 QAHIDRIEKALALVRKFLDWDRALRRFDELNARVEDPTLWDKPKEAEAVMKERRRLEASI 97
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
V +E+ + ++ I+L E D + E L L + ++ ++ ALL+GE D
Sbjct: 98 GTVNEISREMADAVEFIELGEMEGDEDTVNEGLATLAQLADRADADKVQALLAGEADSND 157
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
Y+EV AGAGGTES DWA M+ +MY WA+R+GY+V L+D GE AGIK T+ + GE
Sbjct: 158 TYLEVHAGAGGTESQDWAEMLQRMYTRWAERKGYKVELVDYHSGEAAGIKSCTLLIKGEN 217
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
A+GYAK E GVHRLVRISP+DS RRHTSF++V V P D S V++N +DL+I+ +R+
Sbjct: 218 AYGYAKTESGVHRLVRISPYDSSARRHTSFSSVWVYPVI-DDSFEVEVNPADLKIDTYRA 276
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI-ARQAQ 384
GAGGQH NTTDSAVRI H P+GI Q +RSQH+N+ AMG+L++R+ + E+ R+
Sbjct: 277 SGAGGQHVNTTDSAVRITHQPSGIVVASQIDRSQHKNREIAMGMLKARLFEEEMRKREEA 336
Query: 385 MNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
+AEH S +DI WG+QIR+YVL PY+ VKDLRT + P VL+G+LD F+ + LS
Sbjct: 337 ASAEHA-SKSDIGWGHQIRSYVLQPYQQVKDLRTGVVSTSPGDVLDGELDAFMAAALS 393
>gi|334142138|ref|YP_004535345.1| peptide chain release factor RF-2 [Novosphingobium sp. PP1Y]
gi|333940169|emb|CCA93527.1| peptide chain release factor RF-2 [Novosphingobium sp. PP1Y]
Length = 375
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 162/358 (45%), Positives = 231/358 (64%), Gaps = 3/358 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
++H I +++ +++K L W R + L+A + P LWD P A + +E L +
Sbjct: 6 QAHIDRIEKALALVRKFLDWDRALRRFDELNARVEDPTLWDKPKEAEAVMKERRRLEASI 65
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
V +E+ + ++ ++L E D + E L L + ++ ++ ALL+GE D
Sbjct: 66 GTVNEISREMADAVEFVELGEMEGDEDTVNEGLATLAQLADRADADKVQALLAGEADSND 125
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
Y+EV AGAGGTES DWA M+ +MY WA+R+GY+V L+D GE AGIK T+ + GE
Sbjct: 126 TYLEVHAGAGGTESQDWAEMLQRMYTRWAERKGYKVELVDYHSGEAAGIKSCTLLIKGEN 185
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
A+GYAK E GVHRLVRISP+DS RRHTSF++V V P D S V++N +DL+I+ +R+
Sbjct: 186 AYGYAKTESGVHRLVRISPYDSSARRHTSFSSVWVYPVI-DDSFEVEVNPADLKIDTYRA 244
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI-ARQAQ 384
GAGGQH NTTDSAVRI H P+GI Q +RSQH+N+ AMG+L++R+ + E+ R+
Sbjct: 245 SGAGGQHVNTTDSAVRITHQPSGIVVASQIDRSQHKNREIAMGMLKARLFEEEMRKREEA 304
Query: 385 MNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
+AEH S +DI WG+QIR+YVL PY+ VKDLRT + P VL+G+LD F+ + LS
Sbjct: 305 ASAEHA-SKSDIGWGHQIRSYVLQPYQQVKDLRTGVVSTSPGDVLDGELDAFMAAALS 361
>gi|78066892|ref|YP_369661.1| peptide chain release factor 2 [Burkholderia sp. 383]
gi|77967637|gb|ABB09017.1| bacterial peptide chain release factor 2 (bRF-2) [Burkholderia sp.
383]
Length = 391
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 156/332 (46%), Positives = 226/332 (68%), Gaps = 2/332 (0%)
Query: 110 VRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEN 169
RL ++ EL PN+W+D +A + RE L G + + A + +L + +D+ +LAREE
Sbjct: 58 ARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLTALDSDLRDALDLFELAREEG 117
Query: 170 DTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
D + + S E + + + E + S DP +C+I++QAGAGGTE+ DWASM+L+
Sbjct: 118 DEDTLVASEEDAAKLASRVGDIEFRRMFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQ 177
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y + +R+G++ +++E G++AGIK AT+KV GEYA+G+ + E G+HRLVR SPFDS
Sbjct: 178 YLRYCERKGFKAEVLEESDGDVAGIKNATVKVSGEYAYGFLRTETGIHRLVRKSPFDSSG 237
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RHTSF++V V P D S V+IN +DLRI+ +R+ GAGGQH N TDSAVRI H+PTGI
Sbjct: 238 GRHTSFSSVFVYPEI-DDSIEVEINPADLRIDTYRASGAGGQHINKTDSAVRITHMPTGI 296
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHP 409
CQN+RSQH+N+A AM +L+SR+ ++E+ ++ + S TD+ WG+QIR+YVL
Sbjct: 297 VVQCQNDRSQHRNRAEAMAMLKSRLYEVEMRKRQAEQDKLESSKTDVGWGHQIRSYVLDQ 356
Query: 410 YRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
R VKDLRTN E+S+ +VL+GDLD FI + L
Sbjct: 357 SR-VKDLRTNVEMSNTRAVLDGDLDDFISASL 387
>gi|170733471|ref|YP_001765418.1| peptide chain release factor 2 [Burkholderia cenocepacia MC0-3]
gi|169816713|gb|ACA91296.1| peptide chain release factor 2 [Burkholderia cenocepacia MC0-3]
Length = 391
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 156/332 (46%), Positives = 226/332 (68%), Gaps = 2/332 (0%)
Query: 110 VRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEN 169
RL ++ EL PN+W+D +A + RE L G + + A + +L + +D+ +LAREE
Sbjct: 58 ARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLTALDSDLRDALDLFELAREEG 117
Query: 170 DTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
D + L S + + + + E + S DP +C+I++QAGAGGTE+ DWASM+L+
Sbjct: 118 DEDTLLASEDDAAKLEARVGDIEFRRMFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQ 177
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y + +R+G++ +++E G++AGIK AT+KV GEYA+G+ + E G+HRLVR SPFDS
Sbjct: 178 YLRYCERKGFKAEVLEESDGDVAGIKNATVKVTGEYAYGFLRTETGIHRLVRKSPFDSSG 237
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RHTSF++V V P D S V+IN +DLRI+ +R+ GAGGQH N TDSAVRI H+PTGI
Sbjct: 238 GRHTSFSSVFVYPEI-DDSIEVEINPADLRIDTYRASGAGGQHINKTDSAVRITHMPTGI 296
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHP 409
CQN+RSQH+N+A AM +L+SR+ ++E+ ++ + S TD+ WG+QIR+YVL
Sbjct: 297 VVQCQNDRSQHRNRAEAMAMLKSRLYEVEMRKRQAEQDKLESSKTDVGWGHQIRSYVLDQ 356
Query: 410 YRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
R VKDLRTN E+S+ +VL+GDLD FI + L
Sbjct: 357 SR-VKDLRTNVEMSNTRAVLDGDLDDFISASL 387
>gi|299133776|ref|ZP_07026970.1| peptide chain release factor 2 [Afipia sp. 1NLS2]
gi|298591612|gb|EFI51813.1| peptide chain release factor 2 [Afipia sp. 1NLS2]
Length = 322
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 155/307 (50%), Positives = 216/307 (70%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
+E SL ++ + E+EL + I MI+L END + E+ AL +++ +EL+A
Sbjct: 2 QERTSLENQLGGIGRTERELEDQIGMIELGEAENDEAVVTEAENALKALKKDVARQELEA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+EV AGAGGTES DWASM+L+MY WA+R+G++V ++E GE AGIK
Sbjct: 62 LLSGEADKFDTYLEVHAGAGGTESQDWASMLLRMYTRWAERKGFKVEYLEETQGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI++ G A+G+ K E GVHRLVRISP+DS RRHTSF+++A+ P D+S + INE
Sbjct: 122 SATIQISGHNAYGWLKTEAGVHRLVRISPYDSNARRHTSFSSIAIFPVV-DNSIKIDINE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD+R++ RSGGAGGQH N T+SAVR+ HIPTG+ CQ RSQH+N+A A +L++R+
Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
++E+ ++ + A + TDI WG+QIR+YVL PY+MVKDLRT + SD VL+GDLD
Sbjct: 241 EIELKKREEQAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLDGDLDE 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMAATLA 307
>gi|254500720|ref|ZP_05112871.1| peptide chain release factor 2 [Labrenzia alexandrii DFL-11]
gi|222436791|gb|EEE43470.1| peptide chain release factor 2 [Labrenzia alexandrii DFL-11]
Length = 322
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 156/307 (50%), Positives = 217/307 (70%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + VK EQEL ++I++I+L E+D + ++ EAL ++ K + +LD+
Sbjct: 2 RERQQLDDGINGVKGLEQELADNIELIELGEMEDDKSVVEDAEEALRGLKDKVNQLQLDS 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+E+ +GAGGTES DWASM+L+MY+ WA++RGY+V L++ GE AGIK
Sbjct: 62 LLSGEADGNDTYLEINSGAGGTESQDWASMLLRMYRRWAEKRGYKVELLEYHDGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
AT+ + GE A+G+ K E GVHRLVRISP+DS RRHTSF++ V P D S + +NE
Sbjct: 122 SATLLIKGENAYGWLKTESGVHRLVRISPYDSNARRHTSFSSAWVYPVI-DDSIEIDVNE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD RI+ +R+ GAGGQH NTTDSAVRI H PTGI CQ+ERSQH+N+A+A G+L++R+
Sbjct: 181 SDCRIDTYRASGAGGQHVNTTDSAVRITHQPTGIVVQCQSERSQHKNRATAWGMLKARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ ++ + S TDI WG+QIR+YVL PY++VKDLRT + + PD VL+G LD
Sbjct: 241 EAELKKREEAANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVQSTSPDDVLDGSLDS 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMEAALA 307
>gi|107028703|ref|YP_625798.1| peptide chain release factor 2 [Burkholderia cenocepacia AU 1054]
gi|116690138|ref|YP_835761.1| peptide chain release factor 2 [Burkholderia cenocepacia HI2424]
gi|105897867|gb|ABF80825.1| bacterial peptide chain release factor 2 (bRF-2) [Burkholderia
cenocepacia AU 1054]
gi|116648227|gb|ABK08868.1| bacterial peptide chain release factor 2 (bRF-2) [Burkholderia
cenocepacia HI2424]
Length = 391
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 156/332 (46%), Positives = 226/332 (68%), Gaps = 2/332 (0%)
Query: 110 VRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEN 169
RL ++ EL PN+W+D +A + RE L G + + A + +L + +D+ +LAREE
Sbjct: 58 ARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLTALDSDLRDALDLFELAREEG 117
Query: 170 DTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
D + L S + + + + E + S DP +C+I++QAGAGGTE+ DWASM+L+
Sbjct: 118 DEDTLLASEDDAAKLEARVGDIEFRRMFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQ 177
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y + +R+G++ +++E G++AGIK AT+KV GEYA+G+ + E G+HRLVR SPFDS
Sbjct: 178 YLRYCERKGFKAEVLEESDGDVAGIKNATVKVTGEYAYGFLRTETGIHRLVRKSPFDSSG 237
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RHTSF++V V P D S V+IN +DLRI+ +R+ GAGGQH N TDSAVRI H+PTGI
Sbjct: 238 GRHTSFSSVFVYPEI-DDSIEVEINPADLRIDTYRASGAGGQHINKTDSAVRITHMPTGI 296
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHP 409
CQN+RSQH+N+A AM +L+SR+ ++E+ ++ + S TD+ WG+QIR+YVL
Sbjct: 297 VVQCQNDRSQHRNRAEAMAMLKSRLYEVEMRKRQAEQDKLESSKTDVGWGHQIRSYVLDQ 356
Query: 410 YRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
R VKDLRTN E+S+ +VL+GDLD FI + L
Sbjct: 357 SR-VKDLRTNVEMSNTRAVLDGDLDDFISASL 387
>gi|325291337|ref|YP_004267518.1| peptide chain release factor 2 (bRF-2) [Syntrophobotulus glycolicus
DSM 8271]
gi|324966738|gb|ADY57517.1| bacterial peptide chain release factor 2 (bRF-2) [Syntrophobotulus
glycolicus DSM 8271]
Length = 371
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 169/373 (45%), Positives = 235/373 (63%), Gaps = 7/373 (1%)
Query: 83 GDWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLM 142
DWK + + ++ L V++ L ELN+P+ WDD +A +I +E L
Sbjct: 3 ADWKKEIENLVARLADLRVSLDVPAREVKIGQLEEELNRPDFWDDRSNAQKIMQE---LT 59
Query: 143 GKMKEVKAFEQELLEHIDM---IKLAREENDTELELESLEALLTMRRKSKEKELDALLSG 199
G +V F + E D+ ++A EE+D+ LE E ++ + +R + E EL+ LLSG
Sbjct: 60 GNKDKVALFGELKTETEDLEVLWQMAMEEDDSSLEDEIVKDIHRIRAQYDELELEILLSG 119
Query: 200 ELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATI 259
E D + I + +GAGGTE+ DW M+ +MY W +RR Y+V +D +PGE AGIK T
Sbjct: 120 EYDRNNAIITLHSGAGGTEAQDWVQMLYRMYLRWGERRRYKVETLDLLPGEEAGIKSVTF 179
Query: 260 KVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLR 319
+ GE AFGYAK E GVHRLVRISPFDS RRHTSFA+V VIP + + I+ DL+
Sbjct: 180 SLAGENAFGYAKCEKGVHRLVRISPFDSSGRRHTSFASVDVIPEVNE-DMEINIDSEDLK 238
Query: 320 IERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI 379
++ +RSGGAGGQH N TDSAVRI HIP+GI CQ+ERSQ QN+A M +LQ+++ +L+
Sbjct: 239 VDTYRSGGAGGQHVNKTDSAVRITHIPSGIIVQCQSERSQIQNRAYCMRILQAKLLELKR 298
Query: 380 ARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILS 439
+Q + E L DI+WG+QIR+YV HPY MVKD RTN E + +SV++G++D FI +
Sbjct: 299 KQQEEELLEIRGELNDIAWGSQIRSYVFHPYSMVKDHRTNTETGNVNSVMDGEIDLFISA 358
Query: 440 YLSASLDKDEGGQ 452
YL + K G+
Sbjct: 359 YLKQNARKAVAGK 371
>gi|75675907|ref|YP_318328.1| peptide chain release factor 2 [Nitrobacter winogradskyi Nb-255]
gi|74420777|gb|ABA04976.1| bacterial peptide chain release factor 2 (bRF-2) [Nitrobacter
winogradskyi Nb-255]
Length = 322
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 156/307 (50%), Positives = 214/307 (69%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
+E SL + + E+EL + I MI+L END + ES AL ++++ +EL+A
Sbjct: 2 QERTSLEDSLAGIGKVERELEDQIGMIELGEAENDEAVIDESENALKALKKEVDRRELEA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+EV AGAGGTES DWA+M+L+MY WA++RG++V ++E PGE AGIK
Sbjct: 62 LLSGEADRFDTYLEVHAGAGGTESQDWAAMLLRMYTRWAEKRGFKVEYLEETPGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
AT++V G A+G+ K E GVHRLVRISPFDS RRHTSF++VA+ P D S + I E
Sbjct: 122 SATVQVSGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVAIFPVV-DDSIKIDIKE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD+R + RSGGAGGQH N T+SAVR+ H+PTG+ CQ RSQH+N+A A +L++R+
Sbjct: 181 SDVRTDTMRSGGAGGQHVNKTESAVRLTHVPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
++E+ R+ + A + TDI WG+QIR+YVL PY+MVKDLRT + SD VL+G+LD
Sbjct: 241 EIELKRREEQAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLDGNLDD 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMAATLA 307
>gi|312115773|ref|YP_004013369.1| peptide chain release factor 2 [Rhodomicrobium vannielii ATCC
17100]
gi|311220902|gb|ADP72270.1| Peptide chain release factor 2 [Rhodomicrobium vannielii ATCC
17100]
Length = 376
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 164/351 (46%), Positives = 233/351 (66%), Gaps = 1/351 (0%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
I QS+ ++++ L W +RL L+ + P LWD+P A ++ RE L +
Sbjct: 12 IKQSLSLLRRYLDWDKAKIRLANLNEIVEDPTLWDNPQRAQKLLRERQHLDTALTAYSQL 71
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
L + + +I+L EE+D E+ E+ +L ++ + +++E++ALLSGE D ++EV
Sbjct: 72 AARLDDAVGLIELGEEESDEEVVKEAEASLAVLQTEVQKREVEALLSGEADGNDTFLEVH 131
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AGAGGTES DW M+L+MY WA+ +GY+V L++ GE AG+K ATI+V G AFG+ K
Sbjct: 132 AGAGGTESQDWTEMLLRMYMRWAEEQGYKVELIESAAGEEAGLKSATIQVKGSNAFGWLK 191
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
E GVHRLVRISP+DS RRHTSFA+V V P D + + +NESD RI+ +R+ GAGGQ
Sbjct: 192 TESGVHRLVRISPYDSNARRHTSFASVWVYPVV-DDTIDIAVNESDCRIDTYRASGAGGQ 250
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQ 391
H NTTDSAVRI H+PTGI CQ ERSQH+N+A+A +L++R+ + E+ ++
Sbjct: 251 HVNTTDSAVRITHVPTGIVVQCQMERSQHKNRATAWNMLKARLYEQELKKREDAAHAAAA 310
Query: 392 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
S TDI WG+QIR+YVL PY+MVKDLRT ++P +VL+GDL FI + L+
Sbjct: 311 SKTDIGWGHQIRSYVLQPYQMVKDLRTGIVNTNPPAVLDGDLTAFIEAALA 361
>gi|240850608|ref|YP_002972008.1| peptide chain release factor 2 [Bartonella grahamii as4aup]
gi|240267731|gb|ACS51319.1| peptide chain release factor 2 [Bartonella grahamii as4aup]
Length = 375
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 163/351 (46%), Positives = 234/351 (66%), Gaps = 1/351 (0%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
I ++IQ+++ L W RL L+ + P+LWDD A + RE L + + +F
Sbjct: 12 IQKAIQLLRGHLDWDQSLKRLEYLNQKAEDPSLWDDAQQAQDMMRERQRLDDSINGLLSF 71
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
+ L E I++I + EE+D E+ ++ ++ ++ + ++++D LLSGE DP Y+EV
Sbjct: 72 TKTLEECIELIAMGEEESDVEIIADAENSIRNLKNEIDKRQIDVLLSGEADPNDTYLEVH 131
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AGAGGTES DWASM+L+MY WA++ +V +++ GE AGIK ATI V G A+G K
Sbjct: 132 AGAGGTESQDWASMLLRMYMRWAEQHEMKVEILEIHDGEEAGIKSATILVKGHNAYGMLK 191
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
E GVHRLVRISPFDS +RHTSFA++ V P D + V ++E+D+RI+ +R+ GAGGQ
Sbjct: 192 TESGVHRLVRISPFDSNAKRHTSFASIWVYP-VIDDNIEVDVSEADVRIDTYRASGAGGQ 250
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQ 391
H NTTDSAVRI HI TGI CQ ERSQH+N+A+A +L++R+ + E+ ++ +
Sbjct: 251 HVNTTDSAVRITHIKTGIVVQCQTERSQHKNRATAWSMLRARLYEEELKKREEETNAAES 310
Query: 392 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
S T+I WG+QIR+YVL PY++VKDLRT E +DP SVL G+LD FI + L+
Sbjct: 311 SKTEIGWGHQIRSYVLQPYQLVKDLRTGIENTDPQSVLNGNLDAFIEAALA 361
>gi|197105302|ref|YP_002130679.1| peptide chain release factor 2 [Phenylobacterium zucineum HLK1]
gi|238690157|sp|B4RCR3.1|RF2_PHEZH RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|196478722|gb|ACG78250.1| peptide chain release factor 2 [Phenylobacterium zucineum HLK1]
Length = 369
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 163/341 (47%), Positives = 223/341 (65%), Gaps = 3/341 (0%)
Query: 103 LQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMI 162
W+ +L+ L+A + P LW+DP A +SRE L +++ V E++L + +
Sbjct: 20 FDWEPALRKLDELNARVEDPTLWNDPDEAQAVSRERSRLSAQVEAVHGLERDLADALGYA 79
Query: 163 KLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDW 222
+LA EE D E+ L ++ ++ EL+ALLSGE D Y+E+ +GAGGTES DW
Sbjct: 80 ELADEEGDEASLDEARAQLREIKERAARAELEALLSGEADGNDAYVEINSGAGGTESNDW 139
Query: 223 ASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRI 282
A M+L+MY WAQ G V +++E GE AGIK T++V G A+G+ K E GVHRLVRI
Sbjct: 140 AGMLLRMYTRWAQAHGMSVDVIEETAGEQAGIKSVTLQVKGTNAYGWLKTEAGVHRLVRI 199
Query: 283 SPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRI 342
SP+DS RRHTSFA+V V P D + ++IN +D+R + +R+ GAGGQH N TDSAVR+
Sbjct: 200 SPYDSSARRHTSFASVWVYPVI-DDNIEIEINPADVRTDTYRASGAGGQHVNKTDSAVRL 258
Query: 343 IHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI-ARQAQMNAEHTQSLTDISWGNQ 401
HIPTGI CQ +RSQHQN+ A +L++R+ +LE+ R+A A Q TDI WG+Q
Sbjct: 259 THIPTGIAVACQTQRSQHQNRDQAWKMLRARLYELELEKREAAQQALEDQK-TDIGWGHQ 317
Query: 402 IRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
IR+YVL PY+MVKDLRT E SD VL+GDLD F+ + L+
Sbjct: 318 IRSYVLQPYQMVKDLRTEVETSDTQGVLDGDLDAFMGAALA 358
>gi|258512512|ref|YP_003185946.1| hypothetical protein Aaci_2552 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257479238|gb|ACV59557.1| conserved hypothetical protein [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 383
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 165/370 (44%), Positives = 233/370 (62%)
Query: 80 ESEGDWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHG 139
E+ G+ + ++A + + L R+ L A + P+ WDDP A +I E
Sbjct: 3 ETYGELRQELKSMATRLADFGRSLDVAGKEHRIATLEALMAAPDFWDDPDRAQKIIAEMN 62
Query: 140 SLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSG 199
+ + ++ E L + ++LA+EE+D +L E+ ++ + E EL +LSG
Sbjct: 63 GVKSVVDTMRRLESLLQDAEVALQLAQEEDDHDLFAEANRLAEQLKSEMDEFELQLMLSG 122
Query: 200 ELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATI 259
E D + +E+ GAGGTES DWASM+L+MY WA+ GY+V ++D +PGE AGIK T+
Sbjct: 123 EYDKNNAILELHPGAGGTESQDWASMLLRMYTRWAEDHGYKVEVLDYLPGEEAGIKSVTL 182
Query: 260 KVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLR 319
V G A+GY KAE GVHRLVRISPFD+ RRHTSFA+V VIP + ++I +LR
Sbjct: 183 LVKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFASVDVIPEIAEDDDSIEIRPEELR 242
Query: 320 IERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI 379
I+ +RS GAGGQH NTTDSAVRI HIPTGI TCQ+ERSQ QN+A AM +L+SR+
Sbjct: 243 IDTYRSTGAGGQHVNTTDSAVRITHIPTGIVVTCQSERSQIQNRARAMEILKSRLAAKRR 302
Query: 380 ARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILS 439
+ Q A+ +I+WG+QIR+YV HPY +VKD RTNYE S+ +V++G++D FI +
Sbjct: 303 EEREQELAQLRGEQKEIAWGSQIRSYVFHPYSLVKDHRTNYETSNTQAVMDGEIDPFIHA 362
Query: 440 YLSASLDKDE 449
YL L +++
Sbjct: 363 YLRWQLAREQ 372
>gi|258541170|ref|YP_003186603.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
pasteurianus IFO 3283-01]
gi|384041091|ref|YP_005479835.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
pasteurianus IFO 3283-12]
gi|384049606|ref|YP_005476669.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
pasteurianus IFO 3283-03]
gi|384052716|ref|YP_005485810.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
pasteurianus IFO 3283-07]
gi|384055948|ref|YP_005488615.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
pasteurianus IFO 3283-22]
gi|384058589|ref|YP_005497717.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
pasteurianus IFO 3283-26]
gi|384061883|ref|YP_005482525.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
pasteurianus IFO 3283-32]
gi|384117959|ref|YP_005500583.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
pasteurianus IFO 3283-01-42C]
gi|421850077|ref|ZP_16283045.1| translation peptide chain release factor 2 [Acetobacter
pasteurianus NBRC 101655]
gi|421852692|ref|ZP_16285377.1| translation peptide chain release factor 2 [Acetobacter
pasteurianus subsp. pasteurianus LMG 1262 = NBRC 106471]
gi|256632248|dbj|BAH98223.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
pasteurianus IFO 3283-01]
gi|256635305|dbj|BAI01274.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
pasteurianus IFO 3283-03]
gi|256638360|dbj|BAI04322.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
pasteurianus IFO 3283-07]
gi|256641414|dbj|BAI07369.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
pasteurianus IFO 3283-22]
gi|256644469|dbj|BAI10417.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
pasteurianus IFO 3283-26]
gi|256647524|dbj|BAI13465.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
pasteurianus IFO 3283-32]
gi|256650577|dbj|BAI16511.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
pasteurianus IFO 3283-01-42C]
gi|256653568|dbj|BAI19495.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
pasteurianus IFO 3283-12]
gi|371459073|dbj|GAB28248.1| translation peptide chain release factor 2 [Acetobacter
pasteurianus NBRC 101655]
gi|371479023|dbj|GAB30580.1| translation peptide chain release factor 2 [Acetobacter
pasteurianus subsp. pasteurianus LMG 1262 = NBRC 106471]
Length = 323
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 153/307 (49%), Positives = 214/307 (69%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L +++ V+A E + + ++I+LA E D +L E + L + ++K +E ++
Sbjct: 3 RERTLLANQIEGVEALETNVRDTSELIELAEAEGDADLVAEGMATLRDLAEEAKRRETES 62
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D CY+EV AGAGGTE+ DW M+L+MY WA+ GY+VTLM+ GE AG+K
Sbjct: 63 LLSGEADSNDCYLEVNAGAGGTEAQDWTEMLLRMYTRWAEAHGYKVTLMESSEGEQAGLK 122
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI V G A+G+ K E GVHRLVRISPFD+ RR TSFA+V V P D S ++IN+
Sbjct: 123 SATILVSGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPVI-DDSIEIEIND 181
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
+DL+++ FR+ GAGGQH N TDSA+RI H+PTGI CQ +RSQH+N+A+AM +L++R+
Sbjct: 182 ADLKVDTFRASGAGGQHVNKTDSAIRITHMPTGIVVACQTDRSQHRNRATAMQMLRARLY 241
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ ++ A + TDI WG+QIR+YVL PY+MVKDLRT E +PD+VL+GDLD
Sbjct: 242 EAELQKREAEAAAAEAAKTDIGWGHQIRSYVLAPYQMVKDLRTGVETGNPDAVLDGDLDA 301
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 302 FMAAALA 308
>gi|148260683|ref|YP_001234810.1| peptide chain release factor 2 [Acidiphilium cryptum JF-5]
gi|326403877|ref|YP_004283959.1| peptide chain release factor 2 [Acidiphilium multivorum AIU301]
gi|338983807|ref|ZP_08632961.1| Peptide chain release factor 2 [Acidiphilium sp. PM]
gi|146402364|gb|ABQ30891.1| bacterial peptide chain release factor 1 (bRF-1) [Acidiphilium
cryptum JF-5]
gi|325050739|dbj|BAJ81077.1| peptide chain release factor 2 [Acidiphilium multivorum AIU301]
gi|338207262|gb|EGO95245.1| Peptide chain release factor 2 [Acidiphilium sp. PM]
Length = 323
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 152/310 (49%), Positives = 220/310 (70%), Gaps = 1/310 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + + V E+E + + + +LA E D + E+ AL + ++K +E+++
Sbjct: 3 RERNRLATQTEAVHTIERETEDALTLAELAEAEGDQSVLAEAEAALRRISEEAKRREIES 62
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LL+GE D CY+EV AGAGGTE+ DWA M+L+MY WA++ GY+VT+++E GE AGIK
Sbjct: 63 LLAGEADGNDCYLEVNAGAGGTEAQDWAEMLLRMYTRWAEQHGYKVTMLEESEGEQAGIK 122
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI+V G A+G+ K E GVHRLVRISPFD+ RR TSFA+V V P D S V+IN
Sbjct: 123 SATIQVSGMNAYGWLKTEAGVHRLVRISPFDANARRQTSFASVWVYPVV-DDSIEVEINP 181
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
+DL+++ FR+ GAGGQH N T+SA+RI H+P+GI CQN+RSQH+N+A+AM +L+SR+
Sbjct: 182 ADLKVDTFRASGAGGQHVNKTESAIRITHVPSGIIVACQNDRSQHRNRATAMEMLKSRLY 241
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
++E+ ++ + A + DI WG+QIR+YVL PY++VKDLRTN+E +PD+VL GDLD
Sbjct: 242 EMELQKREEAAAASESAKRDIGWGHQIRSYVLAPYQLVKDLRTNFESGNPDAVLNGDLDA 301
Query: 436 FILSYLSASL 445
F+ + L++ +
Sbjct: 302 FMAASLASRV 311
>gi|254456112|ref|ZP_05069541.1| peptide chain release factor 2 [Candidatus Pelagibacter sp.
HTCC7211]
gi|207083114|gb|EDZ60540.1| peptide chain release factor 2 [Candidatus Pelagibacter sp.
HTCC7211]
Length = 326
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 151/315 (47%), Positives = 214/315 (67%), Gaps = 1/315 (0%)
Query: 123 NLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALL 182
N W D ++ I +E + KA ++L++ D+ +LA EE + ++ E L+ +
Sbjct: 5 NFWQDKNNSKNIIKEKKLYEDLLNIHKASIEKLIDLNDISELAAEEENQAVQKEILQNIK 64
Query: 183 TMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVT 242
+R K E+ LS E D CYIE+ AGAGGTES DWA M+ +MY WA ++ ++
Sbjct: 65 DLRDLVKTNEIKCFLSNETDSLDCYIEIHAGAGGTESQDWAEMLRRMYLKWADQKNFKSN 124
Query: 243 LMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIP 302
L+ E G+ AGIK +TIK++G+Y FG+ K E G+HRLVRISPFDSG RRHTSFA++ V P
Sbjct: 125 LISEHKGDEAGIKSSTIKIEGDYVFGWLKKESGIHRLVRISPFDSGARRHTSFASIWVYP 184
Query: 303 NSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQN 362
D + +++I E DLRI+ +RS GAGGQH NTTDSAVRI HIP+ I CQNERSQH+N
Sbjct: 185 -VVDENINIEIIEKDLRIDTYRSSGAGGQHVNTTDSAVRITHIPSKIVVQCQNERSQHKN 243
Query: 363 KASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEV 422
K + + +L++R+ EI ++ Q N S ++I WG+QIR+YVL PYR+VKD RTN+E
Sbjct: 244 KETCINMLKARLYDYEIKKKEQKNQNTENSKSEIGWGHQIRSYVLQPYRLVKDNRTNFES 303
Query: 423 SDPDSVLEGDLDGFI 437
++PD +L+G++DGF+
Sbjct: 304 TNPDKILDGEIDGFL 318
>gi|339022504|ref|ZP_08646441.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
tropicalis NBRC 101654]
gi|338750491|dbj|GAA09745.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
tropicalis NBRC 101654]
Length = 322
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 153/302 (50%), Positives = 212/302 (70%), Gaps = 1/302 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L G+++ V A E + + ++++LA E D E+ E++ L + ++K +E ++
Sbjct: 2 RERTLLAGQVEGVLALENSVQDTCELVELAEAEGDAEVVQEAISTLKQLAEEAKRRETES 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D CY+EV AGAGGTE+ DWA M+L+MY WA+ GY+VTLM+ GE AG+K
Sbjct: 62 LLSGEADSNDCYLEVNAGAGGTEAQDWAEMMLRMYTRWAEAHGYKVTLMESSEGEQAGLK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI V G A+G+ K E GVHRLVRISPFD+ RR TSFA+V V P D S +++N+
Sbjct: 122 SATILVSGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPVI-DDSIEIEVND 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SDL+++ FR+ GAGGQH N TDSA+RI HIPTGI CQ +RSQH+N+A+AM +L++R+
Sbjct: 181 SDLKVDTFRASGAGGQHVNKTDSAIRITHIPTGIVVACQTDRSQHRNRATAMQMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ ++ A + TDI WG+QIR+YVL PY+MVKDLRT E +PD+VL+G LD
Sbjct: 241 EAELQKREAAAAATEAAKTDIGWGHQIRSYVLAPYQMVKDLRTGVETGNPDAVLDGALDD 300
Query: 436 FI 437
F+
Sbjct: 301 FM 302
>gi|399037698|ref|ZP_10734373.1| peptide chain release factor 2 [Rhizobium sp. CF122]
gi|398064720|gb|EJL56396.1| peptide chain release factor 2 [Rhizobium sp. CF122]
Length = 342
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 155/321 (48%), Positives = 224/321 (69%), Gaps = 1/321 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
PNLW+D A ++ RE L + V+ EQEL ++I++I++ EE D + ++ +AL
Sbjct: 8 PNLWNDAQEAQKLMRERQQLDDGINGVRQLEQELTDNIELIEMGEEEGDERVVKDAEDAL 67
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
++ ++ ++++A+LSGE D Y+EV +GAGGTES DWA+M+L+MY WA+R+ ++V
Sbjct: 68 KGLKAEAARRQVEAMLSGEADSNDTYLEVHSGAGGTESQDWANMLLRMYTRWAERQRFKV 127
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
L++ GE AGIK AT+ V G A+G+ K E GVHRLVRISP+DS RRHTSF+++ V
Sbjct: 128 ELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFSSIWVY 187
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D S +++INESD RI+ +RS GAGGQH NTTDSAVRI HIPTGI CQ ERSQH+
Sbjct: 188 PVV-DDSINIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVACQQERSQHK 246
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
N+A A +L++R+ + E+ ++ + S TDI WG+QIR+YVL PY++VKDLRT
Sbjct: 247 NRAKAWDMLRARMYEAELKKREEAANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVA 306
Query: 422 VSDPDSVLEGDLDGFILSYLS 442
+ P VL+G+L+ F+ + L+
Sbjct: 307 STAPGDVLDGELNEFMEAALA 327
>gi|71733798|ref|YP_276012.1| peptide chain release factor 2 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71554351|gb|AAZ33562.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
syringae pv. phaseolicola 1448A]
Length = 368
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 159/355 (44%), Positives = 238/355 (67%), Gaps = 4/355 (1%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
+++ + I+ L + + + RL ++ EL PN+W++P +A + RE L ++ +
Sbjct: 17 LSERSETIRGYLDYDHKHDRLTEVNRELEDPNVWNNPTYAQELGRERSLLAQIVETLDEM 76
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEK-ELDALLSGELDPCSCYIEV 210
L + D++ ++ EE D + ++ + A + R+S EK E + SGE+DP + Y+++
Sbjct: 77 SSGLADAKDLLLMSAEEED-QAAVDDVAAEVERLRESLEKLEFRRMFSGEMDPNNAYLDI 135
Query: 211 QAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYA 270
QAG+GGTE+ DWA+++L+MY WA +RG+ T+M+ GE+AGIK AT+ + GEYAFG+
Sbjct: 136 QAGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWL 195
Query: 271 KAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGG 330
+ E+GVHRLVR SPFDSG RRHTSF+AV V P D + + IN SDLRI+ +RS GAGG
Sbjct: 196 RTEIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEI-DDNIEIDINPSDLRIDTYRSSGAGG 254
Query: 331 QHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHT 390
QH NTTDSAVRI H+PT +CQNERSQH NK +AM +L++R+ + E+ ++ +
Sbjct: 255 QHVNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALE 314
Query: 391 QSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ +DI WG+QIR+YVL R +KDLRTN E SD D VL+GD+D ++++ L L
Sbjct: 315 DTKSDIGWGHQIRSYVLDASR-IKDLRTNIERSDCDKVLDGDIDEYLIASLKQGL 368
>gi|183219678|ref|YP_001837674.1| peptide chain release factor 2 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189909814|ref|YP_001961369.1| peptide chain release factor 2 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167774490|gb|ABZ92791.1| Peptide chain release factor 2 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167778100|gb|ABZ96398.1| Peptide chain release factor 2 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 375
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 166/374 (44%), Positives = 232/374 (62%), Gaps = 21/374 (5%)
Query: 78 LDESEGDWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISRE 137
+D S + K + +S Q ++ RL L + N P LWD P A ++++
Sbjct: 1 MDRSLKELKKQTTEMIESFQTYWTAQNFQEDYDRLLSLIEKANDPKLWDSPDQAKNVTQK 60
Query: 138 HGSLMGKMKEVKAFEQELLEHIDMIKLAREE----------NDTELELESLEALLTMRRK 187
L K+ ++ELL+ D+I+L EE +D + ES E L
Sbjct: 61 RNELQMKLDPWLGLKKELLDFPDLIELTSEEMGESGLKSLNDDFDRMFESFENL------ 114
Query: 188 SKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEM 247
+ LDAL SG+ D + +I + GAGGTES DWA M+L+MY +A+++GYR L+D
Sbjct: 115 ---QMLDAL-SGKDDGKAAFINIHPGAGGTESQDWADMLLRMYTRFAEQKGYRAELVDYQ 170
Query: 248 PGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDS 307
PGE AGIK AT+ + G++ FGY K E GVHRLVRISPFDS KRRHTSFA+V V P D
Sbjct: 171 PGETAGIKNATLYIQGDHPFGYLKCESGVHRLVRISPFDSNKRRHTSFASVYVTPEV-DD 229
Query: 308 STHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAM 367
V I E DLR++ +RS GAGGQH NTTDSAVRI HIPTG+ +CQ ERSQ +N+ +AM
Sbjct: 230 DIQVNIEEKDLRVDVYRSSGAGGQHVNTTDSAVRITHIPTGVVVSCQMERSQIKNRDTAM 289
Query: 368 GVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDS 427
+L++R+ ++E + + NA+ DI+WG+QIR+YV HPY +VKD RT++E + +
Sbjct: 290 KMLKARLYEMEKQKAEEENAKKAGEKRDIAWGSQIRSYVFHPYNLVKDHRTDFETGNVHA 349
Query: 428 VLEGDLDGFILSYL 441
V++GDL+ FI++YL
Sbjct: 350 VMDGDLEDFIIAYL 363
>gi|121602405|ref|YP_989094.1| peptide chain release factor 2 [Bartonella bacilliformis KC583]
gi|120614582|gb|ABM45183.1| peptide chain release factor 2 [Bartonella bacilliformis KC583]
Length = 376
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 161/351 (45%), Positives = 233/351 (66%), Gaps = 1/351 (0%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
I Q++Q++++ L W RL L+ + P+LWD+ A + RE SL + ++ F
Sbjct: 12 IQQALQLLRRHLDWDQSLKRLEYLNQKAEDPSLWDNAQQAQDMMRERQSLEDSINSIELF 71
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
Q+L E I++I + EE D ++ ++ + ++ + ++++D LLSGE D Y+E+
Sbjct: 72 TQKLEESIELIAMGEEERDVDVIADAENTIRELKNEIDKRQIDILLSGEADSNDTYLEIH 131
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AGAGGTES DWA+M+L+MY W ++ +V +++ GE AGIK ATI + G A+G K
Sbjct: 132 AGAGGTESQDWAAMLLRMYIRWVEQHKMKVEVLEINDGEEAGIKSATILIKGHNAYGMIK 191
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
E GVHRLVRISP+DS RRHTSFA+V V P D + V ++ESD+RI+ +R+ GAGGQ
Sbjct: 192 TESGVHRLVRISPYDSNARRHTSFASVWVYP-VVDDNIKVDVSESDVRIDTYRASGAGGQ 250
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQ 391
H NTTDSAVRI HI TGI CQ ERSQH+N+A+A +L++R+ + E+ ++ +
Sbjct: 251 HVNTTDSAVRITHIKTGIVVQCQTERSQHKNRATAWSMLRARLYEEELKKREEETNAVEA 310
Query: 392 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
S T+I WG+QIR+YVL PY++VKDLRT E +DP SVL GDLD FI + L+
Sbjct: 311 SKTEIGWGHQIRSYVLQPYQLVKDLRTGIENTDPQSVLNGDLDRFIEAALA 361
>gi|387126791|ref|YP_006295396.1| peptide chain release factor 2 [Methylophaga sp. JAM1]
gi|386273853|gb|AFI83751.1| Peptide chain release factor 2 [Methylophaga sp. JAM1]
Length = 351
Score = 317 bits (813), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 161/336 (47%), Positives = 228/336 (67%), Gaps = 4/336 (1%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++ EL PN+W++P +A ++ +E SL +K + + + L + D+++LA EEND
Sbjct: 19 RLVEVTRELEDPNVWNEPENAQKLGQERSSLERIVKTLSSHSEVLDDAKDLLELAVEEND 78
Query: 171 TELELESLEALLTMRRKSKEK-ELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
E ++ A L K EK E + SG+LD S Y+++Q+G+GGTE+ DWA+++L+M
Sbjct: 79 -EDTFNAVNADLDALEKGLEKLEFQRMFSGKLDANSAYLDIQSGSGGTEAQDWANIILRM 137
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y W + +GY+VTLM+ GE+AGIK AT++ +GEYAFG + E GVHRLVR SPFDSG
Sbjct: 138 YLRWGEAQGYKVTLMEVSEGEVAGIKSATVRFEGEYAFGMLRTETGVHRLVRKSPFDSGA 197
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RRHTSFA+V V P D + + IN SDLRI+ +RS GAGGQH NTTDSAVRI H+PT
Sbjct: 198 RRHTSFASVFVYPEV-DDTIEIDINPSDLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNT 256
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHP 409
CQ ERSQH+N+ AM L++++ +LE+ +Q ++ +S +DI WG+QIR+YVL
Sbjct: 257 VVQCQMERSQHKNRDQAMNQLRAKLYELELQKQNEVKQAAEESKSDIGWGSQIRSYVLDQ 316
Query: 410 YRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E + +VL+GDLD FI + L + L
Sbjct: 317 SR-IKDLRTGVETGNTQAVLDGDLDQFIEASLKSGL 351
>gi|30249212|ref|NP_841282.1| peptide chain release factor 2 [Nitrosomonas europaea ATCC 19718]
gi|30180531|emb|CAD85140.1| Peptide chain release factor 2 [Nitrosomonas europaea ATCC 19718]
Length = 347
Score = 317 bits (813), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 155/332 (46%), Positives = 225/332 (67%), Gaps = 2/332 (0%)
Query: 110 VRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEN 169
+RL L + P +W+DP A + RE SL + +++ +++L + +++++A+EEN
Sbjct: 14 IRLTELERQSEDPAIWNDPDRAQEMGREKKSLENIVHTLQSVDRQLRDTHELLQIAQEEN 73
Query: 170 DTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
D E + + + + E + S +DP +C++++Q+G+GGTE+ DWASM+ +M
Sbjct: 74 DKETLQSIADDVTELDQTLAGMEFRRMFSDPMDPNNCFVDIQSGSGGTEAQDWASMLERM 133
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y + +RRG V L++E PG++AGIK AT+K+ GEYA+GY + E GVHRLVR SPFDSG
Sbjct: 134 YLRYCERRGLGVELLEESPGDVAGIKSATLKISGEYAYGYLRTETGVHRLVRKSPFDSGN 193
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RRHTSFA+V V P D S + IN +DLR++ FR+ GAGGQH N TDSAVRI HIPTGI
Sbjct: 194 RRHTSFASVFVYPEV-DDSIEIDINPADLRVDTFRASGAGGQHINKTDSAVRITHIPTGI 252
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHP 409
CQ+ RSQH+N+A AM VL+SR+ + E+ ++ + S TDI+WG+QIR+YVL
Sbjct: 253 VVQCQSGRSQHRNRADAMTVLKSRLYEAELRKRNETKQAIEDSKTDIAWGHQIRSYVLDQ 312
Query: 410 YRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
R +KDLRTN E+ + +VL+GDLD FI + L
Sbjct: 313 SR-IKDLRTNIEIGNTQAVLDGDLDTFIEASL 343
>gi|108804456|ref|YP_644393.1| peptide chain release factor 2 [Rubrobacter xylanophilus DSM 9941]
gi|108765699|gb|ABG04581.1| bacterial peptide chain release factor 2 (bRF-2) [Rubrobacter
xylanophilus DSM 9941]
Length = 366
Score = 317 bits (813), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 162/350 (46%), Positives = 227/350 (64%), Gaps = 3/350 (0%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
++Q + ++ L R LS E+++P WDDP A ++ E ++K ++
Sbjct: 11 LSQRLDELEAFFDVGRLRERAARLSEEMSRPGFWDDPDRAKGVAAEFSRTEDRLKLMEEL 70
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
L + ++++LA E D EL E L + R+ +E+E+ L +GE D + +
Sbjct: 71 RGRLEDSSELLELA--EGDRELLEEVERELEGIERRIEEQEVARLFTGEYDEGDAILTIN 128
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
+GAGG +S DWA M+ +MY+ WA+RRG+ + +++ GE AGIK AT V G YAFG
Sbjct: 129 SGAGGVDSQDWAEMLARMYRRWAERRGFGLEVIEYTEGEEAGIKSATFSVSGPYAFGLLS 188
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
AE GVHRLVRISPFD+ RRHTSFA+VAV P + D + V+I+E DL+++ +R+ GAGGQ
Sbjct: 189 AERGVHRLVRISPFDASSRRHTSFASVAVAP-AIDDAVEVEIDEKDLKVDTYRASGAGGQ 247
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQ 391
H N TDSAVRI H+PTGI CQNERSQHQN+ +A+ VL++R+ +LE ++ Q A +
Sbjct: 248 HVNKTDSAVRITHLPTGIVVQCQNERSQHQNRETALRVLKARLFELEREKREQEIAAQSG 307
Query: 392 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
+I WG+QIR+YVLHPYRMVKDLRT E D D VL+GDLD FI +YL
Sbjct: 308 EKAEIGWGSQIRSYVLHPYRMVKDLRTGEETGDVDRVLDGDLDRFIYAYL 357
>gi|162147177|ref|YP_001601638.1| peptide chain release factor 2 [Gluconacetobacter diazotrophicus
PAl 5]
gi|161785754|emb|CAP55325.1| Peptide chain release factor 2 [Gluconacetobacter diazotrophicus
PAl 5]
Length = 322
Score = 317 bits (813), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 151/302 (50%), Positives = 218/302 (72%), Gaps = 1/302 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L G+++ V+ E ++ + +D+++LA E D + ++++ L + ++K +E ++
Sbjct: 2 RERTLLAGQVEGVQRLEADVRDTLDLVELAEMEGDDAVLKDAVQMLRALAEEAKRRETES 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D CY+EV AGAGGTE+ DWA M+L+MY WA++ GY+V LM+ GE AG+K
Sbjct: 62 LLSGEADSNDCYLEVNAGAGGTEAQDWAEMLLRMYTRWAEQHGYKVALMESSEGEQAGLK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI+V G A+G+ K E GVHRLVRISPFD+ RR TSFA+V V P D S ++INE
Sbjct: 122 SATIQVTGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPVV-DDSIEIEINE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
+DL+++ FR+ GAGGQH N T+SA+RI HIPTGI CQ +RSQH+N+A+AM +L++R+
Sbjct: 181 ADLKVDTFRASGAGGQHVNKTESAIRITHIPTGIIVACQTDRSQHRNRATAMTMLKARMY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ R+ A+ + TDI WG+QIR+YVL PY++VKDLRT+ E +PD+VL+GDLD
Sbjct: 241 EQELQRREAAAAQTEAAKTDIGWGHQIRSYVLAPYQLVKDLRTSVERGNPDAVLDGDLDD 300
Query: 436 FI 437
F+
Sbjct: 301 FM 302
>gi|435854879|ref|YP_007316198.1| peptide chain release factor 2 [Halobacteroides halobius DSM 5150]
gi|433671290|gb|AGB42105.1| peptide chain release factor 2 [Halobacteroides halobius DSM 5150]
Length = 362
Score = 317 bits (813), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 161/358 (44%), Positives = 233/358 (65%), Gaps = 1/358 (0%)
Query: 84 DWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
D + A I + ++ +++ L + L + L ++++P+ WDD A +IS++ +L
Sbjct: 3 DLTAKLAKIGEQLKELRRSLDYDKLVAKHEKLKEKMSQPDFWDDSSKAQQISKQASALQD 62
Query: 144 KMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDP 203
K+ + +E E +++LA E+D + E E + + +E EL LLSGE D
Sbjct: 63 KITGFDSLVEEREELEVLLELAIAEDDQAVIAEVKERSQKLVKAREELELKVLLSGEYDS 122
Query: 204 CSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDG 263
+ + + GAGGTES DWA M+L+MY WA++ Y + ++ +PGE AG+K TI+V G
Sbjct: 123 NNALLAINPGAGGTESQDWAEMLLRMYTRWAEQHNYDLETLEFIPGEEAGVKSVTIQVSG 182
Query: 264 EYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERF 323
+YA+GY K+E GVHRLVRISPFDS RRHTSFA+V V+P D V I++SDL+IE +
Sbjct: 183 DYAYGYLKSEKGVHRLVRISPFDSSSRRHTSFASVDVMPEL-DEDIEVDIDKSDLKIETY 241
Query: 324 RSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQA 383
R+ GAGGQH NTTDSAVRI H+PTGI A CQNERSQH+N+ AM VLQ+++ + +QA
Sbjct: 242 RASGAGGQHVNTTDSAVRITHLPTGIVAQCQNERSQHKNRQGAMKVLQAKLFEYLQEKQA 301
Query: 384 QMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
+ E +I+WGNQIR+YV HPY+M+KD RT++E + V++GDLD I +YL
Sbjct: 302 EKLDEIRGEHKEIAWGNQIRSYVFHPYQMIKDHRTDFETGKTEQVMDGDLDQLIEAYL 359
>gi|241662572|ref|YP_002980932.1| hypothetical protein Rpic12D_0960 [Ralstonia pickettii 12D]
gi|240864599|gb|ACS62260.1| conserved hypothetical protein [Ralstonia pickettii 12D]
Length = 367
Score = 317 bits (813), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 157/344 (45%), Positives = 231/344 (67%), Gaps = 4/344 (1%)
Query: 99 IKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEH 158
+++ L + + RL + EL P +W+DP A + RE SL + + +++L
Sbjct: 23 LRRYLDYDVKSERLVEVDKELENPEVWNDPKRAQELGREKKSLETVVLALTKLDEDLTGA 82
Query: 159 IDMIKLAREENDTELELESLEA-LLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGT 217
++ +LAREE D E +E++EA MR ++ E + SG +D +C+I++QAGAGGT
Sbjct: 83 AELFELAREEGDDET-IEAIEADTAGMRAIVEDMEFRRMFSGPMDAANCFIDIQAGAGGT 141
Query: 218 ESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVH 277
E+ DWASM+L+ Y + +R+G++ +++E G++AGIK A+IKV+GEYAFG+ + E GVH
Sbjct: 142 EACDWASMLLRQYLKYCERKGFKTEVLEESEGDVAGIKSASIKVEGEYAFGFLRTETGVH 201
Query: 278 RLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTD 337
RLVR SPFDS RHTSF+++ V P D S ++IN +DLR++ +R+ GAGGQH N TD
Sbjct: 202 RLVRKSPFDSAGGRHTSFSSIFVYPEV-DDSIEIEINPADLRVDTYRASGAGGQHINKTD 260
Query: 338 SAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDIS 397
SAVRI HIPTGI CQN+RSQH+N+A AM +L+SR+ + E+ ++ + TD+
Sbjct: 261 SAVRITHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHELRKRQAAADAQEAAKTDVG 320
Query: 398 WGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
WG+QIR+YVL R +KDLRTN E+S+ VL+GDLD FI + L
Sbjct: 321 WGHQIRSYVLDQSR-IKDLRTNVEISNTQKVLDGDLDPFIQASL 363
>gi|16126117|ref|NP_420681.1| peptide chain release factor 2 [Caulobacter crescentus CB15]
gi|221234887|ref|YP_002517323.1| peptide chain release factor 2 [Caulobacter crescentus NA1000]
gi|24638156|sp|Q9A752.1|RF2_CAUCR RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|254790910|sp|B8GWM3.1|RF2_CAUCN RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|13423319|gb|AAK23849.1| peptide chain release factor 2 [Caulobacter crescentus CB15]
gi|220964059|gb|ACL95415.1| bacterial peptide chain Release factor 2 (RF-2) [Caulobacter
crescentus NA1000]
Length = 371
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 161/341 (47%), Positives = 224/341 (65%), Gaps = 3/341 (0%)
Query: 103 LQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMI 162
W +L+ L+A + P LWD P A +SRE +L K++ V++ E++L + ++
Sbjct: 20 FDWDVALRKLDELNARVEDPTLWDRPSEAQAVSRERANLAAKVEAVQSIERDLKDALEYA 79
Query: 163 KLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDW 222
+LA E+D + ++ L +++ ++ EL+ALLSGE D CY+E+ +GAGGTES DW
Sbjct: 80 ELAEMESDEDSLNDARAQLKSLKERAGRAELEALLSGEADGNDCYVEINSGAGGTESCDW 139
Query: 223 ASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRI 282
A ++L+MY WA G L++E G+ AGIK AT+ V G A+G+ K E GVHRLVRI
Sbjct: 140 AGILLRMYTRWANAHGMTTELIEETDGDQAGIKSATLLVKGANAYGWLKTEAGVHRLVRI 199
Query: 283 SPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRI 342
SP+DS RRHTSFA+ V P D + ++IN SD+R + +R+ GAGGQH N TDSAVR+
Sbjct: 200 SPYDSSARRHTSFASAWVYPVV-DDNIEIEINPSDVRTDTYRASGAGGQHINKTDSAVRL 258
Query: 343 IHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI-ARQAQMNAEHTQSLTDISWGNQ 401
HIPTGI CQ RSQHQN+ A +L++R+ + E+ R+A A Q TDI WG+Q
Sbjct: 259 THIPTGIAVACQAGRSQHQNREEAWKMLRARLYEAELQKREAAQQALEDQK-TDIGWGHQ 317
Query: 402 IRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
IR+YVL PY+MVKDLRTN E SD VL+GDLD F+ + L+
Sbjct: 318 IRSYVLQPYQMVKDLRTNVETSDTQGVLDGDLDAFMAASLA 358
>gi|409436778|ref|ZP_11263948.1| Peptide chain release factor 2 (RF-2) [Rhizobium mesoamericanum
STM3625]
gi|408751702|emb|CCM75102.1| Peptide chain release factor 2 (RF-2) [Rhizobium mesoamericanum
STM3625]
Length = 342
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 154/321 (47%), Positives = 223/321 (69%), Gaps = 1/321 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
P LW+D A ++ RE L + VK EQEL ++I++I++ EE D + ++ +AL
Sbjct: 8 PTLWNDAQEAQKLMRERQQLDDGINGVKQLEQELTDNIELIEMGEEEGDESVVKDAEDAL 67
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
++ ++ ++++A+LSGE D Y+EV +GAGGTES DWA+M+L+MY WA+R+ ++V
Sbjct: 68 KGLKAEAARRQVEAMLSGEADSNDTYLEVHSGAGGTESQDWANMLLRMYTRWAERQRFKV 127
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
L++ GE AGIK AT+ + G A+G+ K E GVHRLVRISP+DS RRHTSF+++ V
Sbjct: 128 ELLEVHDGEEAGIKSATLLIKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFSSIWVY 187
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D S +++INESD RI+ +RS GAGGQH NTTDSAVRI HIPTGI CQ ERSQH+
Sbjct: 188 PVV-DDSINIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVACQQERSQHK 246
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
N+A A +L++R+ + E+ ++ + S TDI WG+QIR+YVL PY++VKDLRT
Sbjct: 247 NRAKAWDMLRARMYEAELKKREEAANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVA 306
Query: 422 VSDPDSVLEGDLDGFILSYLS 442
+ P VL+G+L+ F+ + L+
Sbjct: 307 STAPGDVLDGELNEFMEAALA 327
>gi|394987702|ref|ZP_10380541.1| peptide chain release factor 2 [Sulfuricella denitrificans skB26]
gi|393792921|dbj|GAB70180.1| peptide chain release factor 2 [Sulfuricella denitrificans skB26]
Length = 376
Score = 317 bits (813), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 155/336 (46%), Positives = 229/336 (68%), Gaps = 7/336 (2%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL + L P +WDD A + +E +L G + +K +Q L + D+ ++A+EE D
Sbjct: 43 RLTEVVQLLENPAVWDDAKRAQELGKERRTLEGIVDTLKNLDQSLHDSADLFEMAKEEGD 102
Query: 171 TELELESLEA-LLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
+ LES+ A + + E E + S +DP +C+I++Q+G+GGTE+ DWASM+++M
Sbjct: 103 -DATLESVAADAEALEKTVAEMEFRRMFSHPMDPNNCFIDIQSGSGGTEAQDWASMLMRM 161
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y + +R+G++V +++E GE+AG+K AT+K+ G+YAFGY + E GVHRLVR SPFDSG
Sbjct: 162 YVRYCERKGFKVEILEESAGEVAGLKSATLKISGDYAFGYLRTETGVHRLVRKSPFDSGN 221
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RRHTSF++V + P D S V+IN +DLRI+ FR+ GAGGQH N TDSA+RI H+PT +
Sbjct: 222 RRHTSFSSVFIYPEV-DDSIEVEINPADLRIDTFRASGAGGQHINKTDSAIRITHLPTNV 280
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHP 409
CQN+RSQH+N+A AM +L++R+ +LE+ ++ + + TDI WG+QIR+YVL
Sbjct: 281 VVQCQNDRSQHKNRAEAMSMLKARLYELELRKRNEEKQAMEDTKTDIGWGHQIRSYVLDQ 340
Query: 410 YRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRTNYEV + VL+GDL + ++SASL
Sbjct: 341 SR-IKDLRTNYEVGNTQGVLDGDL---LDDFISASL 372
>gi|298291326|ref|YP_003693265.1| peptide chain release factor 2 [Starkeya novella DSM 506]
gi|296927837|gb|ADH88646.1| peptide chain release factor 2 [Starkeya novella DSM 506]
Length = 376
Score = 317 bits (812), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 157/351 (44%), Positives = 233/351 (66%), Gaps = 1/351 (0%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
I ++ ++++ + + RL L+A PNLW+DP A ++ +E G+L + ++
Sbjct: 12 IREAAGLLRQHIDFDRSKARLAELNALAEDPNLWNDPERAQKLMQERGTLEDGLGAIERI 71
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
+EL +++++I+L E D + E+ AL ++ + ++L+ALLSGE D Y+EV
Sbjct: 72 NRELADNVELIELGEAEGDDSIVDEAAAALDRLKAEVARRQLEALLSGEADSNDSYLEVH 131
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AGAGGT+S DWA M+L+MY WA+RRG++V L++E GE AG+K AT+ V G A+G+ K
Sbjct: 132 AGAGGTDSQDWALMLLRMYTRWAERRGFKVELIEEQAGETAGLKSATMLVKGHNAYGWLK 191
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
E GVHRLVRISPFDS RR TSFA++ V P D V I E+D+R++ RSGGAGGQ
Sbjct: 192 TEGGVHRLVRISPFDSNARRQTSFASIDVYPVI-DDRIVVDIKEADVRVDTMRSGGAGGQ 250
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQ 391
H N T+SAVR+ HIPTGI Q +RSQH+N+A+A +L++++ ++E+ ++ A
Sbjct: 251 HVNKTESAVRLTHIPTGIAVVSQGDRSQHKNRATAWDMLRAKLYEMELKKREAQAAADQA 310
Query: 392 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
+ TDI WG+QIR+YVL PY++VKDLRT P VL+GDLD F+ + L+
Sbjct: 311 AKTDIGWGHQIRSYVLQPYQLVKDLRTGVTSGTPQEVLDGDLDPFMEAALA 361
>gi|85859385|ref|YP_461587.1| peptide chain release factor 2 [Syntrophus aciditrophicus SB]
gi|85722476|gb|ABC77419.1| bacterial peptide Chain Release Factor 2 (RF-2) [Syntrophus
aciditrophicus SB]
Length = 279
Score = 317 bits (812), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 149/282 (52%), Positives = 204/282 (72%), Gaps = 9/282 (3%)
Query: 164 LAREENDTELELESLEALL----TMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTES 219
+A+EEND E +LEA+ ++R+ +E EL +L E DP + + + AGAGGTE+
Sbjct: 1 MAKEENDEE----ALEAISNDIESLRKSVRESELKMMLGSEQDPMNAIVSIHAGAGGTEA 56
Query: 220 MDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRL 279
DW M+L+MY WA++RG++ T++D +PG+ AG+K + ++GEYA+GYAKAE+G+HRL
Sbjct: 57 QDWVEMLLRMYLRWAEKRGFKTTIIDYLPGDEAGVKSVSFTIEGEYAYGYAKAEIGIHRL 116
Query: 280 VRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSA 339
VRISPFD+ RRHTSFA+V V P D V+I+E DLRI+ +RS GAGGQH N TDSA
Sbjct: 117 VRISPFDASSRRHTSFASVFVYPEVNDEIV-VEIDEKDLRIDTYRSTGAGGQHVNKTDSA 175
Query: 340 VRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWG 399
VRI H+PTGI CQNERSQH+NKA AM L+SR+ +L+I Q + +E ++ DI+WG
Sbjct: 176 VRITHMPTGIVVQCQNERSQHKNKAMAMKYLRSRLYELKIQEQNEKLSEINKTKKDIAWG 235
Query: 400 NQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
+QIR+YVL PY+MVKD RTN E+ + VL+GD+D I +YL
Sbjct: 236 SQIRSYVLQPYKMVKDHRTNIEIGNVGRVLDGDIDDLIEAYL 277
>gi|163783151|ref|ZP_02178145.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1]
gi|159881485|gb|EDP74995.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1]
Length = 367
Score = 317 bits (812), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 161/367 (43%), Positives = 233/367 (63%), Gaps = 12/367 (3%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
KS + + + I+K L L L + ++ WDD A ++ ++ L +
Sbjct: 5 KSKIEELKERFEGIRKVLDIDRLKEELRKMDETMSAQGFWDDQEKAKKVIQKRKWLEETV 64
Query: 146 KEVKAFEQELLEHIDMIKLAREEN-DT----ELELESLEALLTMRRKSKEKELDALLSGE 200
++ E+ L + ++ + EE+ DT E E+ESLE L KE EL LSGE
Sbjct: 65 NSIETLEKSLRDVEELSQTTPEEDTDTWAILEEEMESLEDKL------KELELKTYLSGE 118
Query: 201 LDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIK 260
+D + Y+ +QAGAGGTE+ DWA M+ +MY+ WA+R+GY V ++D P ++AGIK T+
Sbjct: 119 MDSKNAYLTIQAGAGGTEACDWADMLYRMYRRWAERKGYDVEVVDITPDDVAGIKSVTLL 178
Query: 261 VDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRI 320
V G YA+GY + E GVHRLVRISPFDS RRHTSFAAV+V+P D ++++ + DL+I
Sbjct: 179 VKGPYAYGYLRGEQGVHRLVRISPFDSNARRHTSFAAVSVMPQI-DEDINIEVRDEDLKI 237
Query: 321 ERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIA 380
E FR+ GAGGQ+ N TD+AVR+ HIPTGI +CQ ERSQ QN+ A+ +L++++ QLE
Sbjct: 238 ETFRASGAGGQYVNKTDTAVRLTHIPTGIVVSCQQERSQFQNRRKALELLKAKLYQLEQQ 297
Query: 381 RQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSY 440
+ + ++ TDI WG+QIR+YV HPYR+VKDLRT YE + D+V++GD+D FI +
Sbjct: 298 KLMEKRKQYEGEKTDIGWGHQIRSYVFHPYRLVKDLRTGYETGNVDAVMDGDIDQFIEGF 357
Query: 441 LSASLDK 447
L +K
Sbjct: 358 LKWQAEK 364
>gi|187927990|ref|YP_001898477.1| hypothetical protein Rpic_0895 [Ralstonia pickettii 12J]
gi|238691788|sp|B2U8V1.1|RF2_RALPJ RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|187724880|gb|ACD26045.1| conserved hypothetical protein [Ralstonia pickettii 12J]
Length = 367
Score = 317 bits (811), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 156/344 (45%), Positives = 231/344 (67%), Gaps = 4/344 (1%)
Query: 99 IKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEH 158
+++ L + + RL + EL P +W+DP A + RE SL + + +++L
Sbjct: 23 LRRYLDYDVKSERLVEVDKELENPEVWNDPKRAQELGREKKSLETVVLALTKLDEDLTGA 82
Query: 159 IDMIKLAREENDTELELESLEA-LLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGT 217
++ +LAREE D E +E++EA MR ++ E + SG +D +C+I++QAGAGGT
Sbjct: 83 AELFELAREEGDDET-IEAIEADTAGMRAIVEDMEFRRMFSGPMDAANCFIDIQAGAGGT 141
Query: 218 ESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVH 277
E+ DWASM+L+ Y + +R+G++ +++E G++AGIK A+IKV+GEYAFG+ + E GVH
Sbjct: 142 EACDWASMLLRQYLKYCERKGFKTEVLEESEGDVAGIKSASIKVEGEYAFGFLRTETGVH 201
Query: 278 RLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTD 337
RLVR SPFDS RHTSF+++ V P D S +++N +DLR++ +R+ GAGGQH N TD
Sbjct: 202 RLVRKSPFDSAGGRHTSFSSIFVYPEV-DDSIEIEVNPADLRVDTYRASGAGGQHINKTD 260
Query: 338 SAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDIS 397
SAVRI HIPTGI CQN+RSQH+N+A AM +L+SR+ + E+ ++ + TD+
Sbjct: 261 SAVRITHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHELRKRQAAADAQEAAKTDVG 320
Query: 398 WGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
WG+QIR+YVL R +KDLRTN E+S+ VL+GDLD FI + L
Sbjct: 321 WGHQIRSYVLDQSR-IKDLRTNVEISNTQKVLDGDLDPFIQASL 363
>gi|291279507|ref|YP_003496342.1| peptide chain release factor RF-2 [Deferribacter desulfuricans
SSM1]
gi|290754209|dbj|BAI80586.1| peptide chain release factor RF-2 [Deferribacter desulfuricans
SSM1]
Length = 375
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 159/354 (44%), Positives = 235/354 (66%), Gaps = 10/354 (2%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSA-ELNKPNLWDDPVHAGRISREHGSLMGKMKEVKA 150
I +SI+ K+ ++ +N ++ + + P+ W+ + ++ +E SL + E
Sbjct: 15 IDKSIESFKQVVKEDEINKKIEAIDKMSMEDPDFWNKK-ESKQLLKEQASLKKFLSEW-- 71
Query: 151 FEQELL---EHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCY 207
+ELL E ID++ +E E++ + + L ++++ + EL +L+GE D +
Sbjct: 72 --EELLTIREDIDVLIELFKEGSEEVKEDIISNLNELKKRVSDFELKLILNGEHDINNAI 129
Query: 208 IEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAF 267
+ + AGAGGTE+ DW SM+ +MY W +R+ Y+ ++D +PG+ AGIK T V GEY++
Sbjct: 130 VTIHAGAGGTEACDWVSMLFRMYTRWVERKKYKYEILDMLPGDEAGIKSITFNVIGEYSY 189
Query: 268 GYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGG 327
GY K E GVHRLVRISPFDS RRHTSFA+V V+P ++INESDL+IE FR+ G
Sbjct: 190 GYLKGESGVHRLVRISPFDSNNRRHTSFASVFVLPEID-DEIDIEINESDLKIETFRASG 248
Query: 328 AGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNA 387
AGGQH NTTDSAVRI H+PTGI +CQNERSQH+NKA AM +L++R+ + E+ ++ +
Sbjct: 249 AGGQHVNTTDSAVRITHLPTGIVVSCQNERSQHKNKAHAMKILKARLYEYEMEKRNKEKE 308
Query: 388 EHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
+ S T+I WGNQIR+YV+HPY+MVKDLRT YE + D+V++GD+D FI +YL
Sbjct: 309 KLESSKTEIGWGNQIRSYVMHPYKMVKDLRTRYETGNVDAVMDGDIDDFIKTYL 362
>gi|418296153|ref|ZP_12907997.1| peptide chain release factor 2 [Agrobacterium tumefaciens
CCNWGS0286]
gi|355539585|gb|EHH08823.1| peptide chain release factor 2 [Agrobacterium tumefaciens
CCNWGS0286]
Length = 322
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 156/307 (50%), Positives = 216/307 (70%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + VKA EQ+L ++I++I+L E D E+ ++ +AL ++ ++ ++++A
Sbjct: 2 RERQQLDDSINGVKALEQQLRDNIELIELGEMEGDDEIVKDAEDALKALKSEANRRQVEA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
+LSGE D Y+EV +GAGGTES DWA+M+L+MY WA R G++V +++ GE AGIK
Sbjct: 62 MLSGEADGNDTYVEVHSGAGGTESQDWANMLLRMYTRWADREGFKVEVLEVHDGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI V G AFG+ K E GVHRLVRISP+DS RRHTSF++V V P D S + INE
Sbjct: 122 SATILVKGHNAFGWMKTESGVHRLVRISPYDSNARRHTSFSSVWVYPVV-DDSIQIDINE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD RI+ +RS GAGGQH NTTDSAVRI HIPTGI CQ ERSQH+N+A A +L++R+
Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIAVACQQERSQHKNRAKAWDMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
++E+ ++ + S TDI WG+QIR+YVL PY++VKDLRT E + P +VL+GDL+
Sbjct: 241 EVELQKREEAANAQAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTAPGNVLDGDLNE 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMEAALA 307
>gi|15965084|ref|NP_385437.1| peptide chain release factor 2 [Sinorhizobium meliloti 1021]
gi|384536678|ref|YP_005720763.1| peptide chain release factor 2 [Sinorhizobium meliloti SM11]
gi|433613101|ref|YP_007189899.1| peptide chain release factor 2 [Sinorhizobium meliloti GR4]
gi|15074263|emb|CAC45910.1| Probable peptide chain release factor 2 (RF-2) protein
[Sinorhizobium meliloti 1021]
gi|336033570|gb|AEH79502.1| peptide chain release factor 2 [Sinorhizobium meliloti SM11]
gi|429551291|gb|AGA06300.1| peptide chain release factor 2 [Sinorhizobium meliloti GR4]
Length = 342
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 161/321 (50%), Positives = 227/321 (70%), Gaps = 1/321 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
P+LW+D A ++ RE L + ++ FEQ+L ++I++I+L EE D+ + E+ EAL
Sbjct: 8 PSLWNDAAEAQKLMRERQQLDDGINGLRRFEQQLNDNIELIELGEEEGDSAIVAEAEEAL 67
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
+R ++ +K+++A+LSGE D Y+EV +GAGGTES DWA+M+L+MY WA+R+GY+V
Sbjct: 68 RQLRGEAAKKQVEAMLSGEADQNDTYLEVHSGAGGTESQDWANMLLRMYTRWAERQGYKV 127
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
LM+ GE AGIK AT+ V G A+G+ K E GVHRLVRISP+DS RRHTSF+++ V
Sbjct: 128 ELMEIQDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFSSIWVY 187
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D S + INESD RI+ +RS GAGGQH NTTDSAVRI H+P+GI CQ ERSQH+
Sbjct: 188 PVV-DESIQIDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHMPSGIVVQCQQERSQHK 246
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
N+A A +L++R+ + E+ ++ + S TDI WG+QIR+YVL PY++VKDLRT E
Sbjct: 247 NRAKAWDMLRARLYEAELKKREEAANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVE 306
Query: 422 VSDPDSVLEGDLDGFILSYLS 442
S P VL+G+L+ F+ + L+
Sbjct: 307 SSSPGDVLDGELNEFMEAALA 327
>gi|33596662|ref|NP_884305.1| peptide chain release factor 2 [Bordetella parapertussis 12822]
gi|81579293|sp|Q7W8T4.1|RF2_BORPA RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|33573363|emb|CAE37347.1| peptide chain release factor 2 [Bordetella parapertussis]
Length = 367
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 157/350 (44%), Positives = 236/350 (67%), Gaps = 4/350 (1%)
Query: 93 AQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFE 152
A+ Q +++ L + + RL +++AEL P +W+DP HA + RE SL ++ +
Sbjct: 17 AEREQALRRYLDYDAKSERLQVVNAELEDPAIWNDPKHAQDLGREKKSLEDVVETLTELG 76
Query: 153 QELLEHIDMIKLAREENDTELELESLEALLT-MRRKSKEKELDALLSGELDPCSCYIEVQ 211
L + ++++LA ++D + LE++E + + K + E + + DP +C++++Q
Sbjct: 77 SGLADSCELVELALADSD-DATLEAIEHDVDRFQEKLETLEFRRMFANPADPLNCFVDIQ 135
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AGAGGTE+ DWASM+L+ Y +A+R+G++ +++E G++AG+K ATIK++GEYAFGY +
Sbjct: 136 AGAGGTEAQDWASMLLRQYLKYAERKGFKAEILEESEGDVAGLKSATIKIEGEYAFGYLR 195
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
E GVHRLVR SPFDS RHTSFA+V V P D S V++N +DLRI+ +R+ GAGGQ
Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFASVFVYPEV-DESFEVEVNPADLRIDTYRASGAGGQ 254
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQ 391
H N TDSAVRI H P+GI CQN+RSQH+N+A AM +L+S++ +LE+ + +
Sbjct: 255 HINKTDSAVRITHAPSGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMTEQQKLED 314
Query: 392 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
S TD+ WG+QIR+YVL R +KDLRTN E+S+ VL+GDLD FI + L
Sbjct: 315 SKTDVGWGHQIRSYVLDQSR-IKDLRTNVEISNTQKVLDGDLDPFIQASL 363
>gi|83718832|ref|YP_442414.1| peptide chain release factor 2 [Burkholderia thailandensis E264]
gi|83652657|gb|ABC36720.1| peptide chain release factor 2, programmed [Burkholderia
thailandensis E264]
Length = 459
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 160/358 (44%), Positives = 234/358 (65%), Gaps = 9/358 (2%)
Query: 91 AIAQSIQVIKKR-------LQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
AI S+ +++R L + + RL ++ +L PN+W+D +A + RE SL G
Sbjct: 100 AIESSLADLRRRAGELRGYLDYDVKSERLAEVNKQLEDPNVWNDSKNAQALGREKKSLEG 159
Query: 144 KMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDP 203
+ + + +L + D+ LAREEND + + + + + + E + S DP
Sbjct: 160 VVTTLTELDNDLRDAQDLFDLAREENDEDTLVATESDAAKLEARVADIEFRRMFSNPADP 219
Query: 204 CSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDG 263
+C+I++QAGAGGTE+ DWASM+L+ Y + +R+G++ +++E G++AGIK ATIKV G
Sbjct: 220 NNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATIKVSG 279
Query: 264 EYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERF 323
+YA+GY + E G+HRLVR SPFDS RHTSF++V V P D S V+IN +DLRI+ +
Sbjct: 280 DYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEI-DDSIEVEINPADLRIDTY 338
Query: 324 RSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQA 383
R+ GAGGQH N TDSAVRI H+PTGI CQN+RSQH+N+A AM +L+SR+ + E+ ++
Sbjct: 339 RASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFEAELRKRQ 398
Query: 384 QMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
+ S TD+ WG+QIR+YVL R VKDLRTN E+S+ +VL+GDLD FI + L
Sbjct: 399 AEQDKLESSKTDVGWGHQIRSYVLDQSR-VKDLRTNVEMSNTKAVLDGDLDDFISASL 455
>gi|422320027|ref|ZP_16401095.1| peptide chain release factor 2 [Achromobacter xylosoxidans C54]
gi|317405230|gb|EFV85568.1| peptide chain release factor 2 [Achromobacter xylosoxidans C54]
Length = 386
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 158/332 (47%), Positives = 226/332 (68%), Gaps = 4/332 (1%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL +++AEL P +W+DP HA + RE +L ++ + L + ++ +LA +ND
Sbjct: 54 RLQVVNAELEDPAVWNDPKHAQDLGREKKALEDVVETLTGLGTGLADSNELFELAAADND 113
Query: 171 TELELESLEALLT-MRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
+ LES+E + K + E + S DP +C++++QAGAGGTE+ DWASM+L+
Sbjct: 114 -DATLESIELDANGFQEKLESLEFRRMFSNPADPLNCFLDIQAGAGGTEAQDWASMLLRQ 172
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y +A+R+G++ +++E GE+AGIK ATIK++GEYAFGY + E GVHRLVR SPFDS
Sbjct: 173 YLKYAERKGFKAEVLEESEGEVAGIKSATIKLEGEYAFGYLRTETGVHRLVRKSPFDSSG 232
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RHTSFA+V V P D S V++N +DLR++ +R+ GAGGQH N TDSAVR+ HIPTGI
Sbjct: 233 GRHTSFASVFVYPEV-DDSFEVEVNPADLRVDTYRASGAGGQHINKTDSAVRLTHIPTGI 291
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHP 409
CQN+RSQH+N+A AM +L+S++ +LE+ + + S TD+ WG+QIR+YVL
Sbjct: 292 VVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMAEQQKLEDSKTDVGWGHQIRSYVLDQ 351
Query: 410 YRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
R +KDLRTN E+S+ VL+GDLD FI + L
Sbjct: 352 SR-IKDLRTNVEISNTQKVLDGDLDPFIQASL 382
>gi|418403263|ref|ZP_12976757.1| peptide chain release factor 2 [Sinorhizobium meliloti CCNWSX0020]
gi|359502805|gb|EHK75373.1| peptide chain release factor 2 [Sinorhizobium meliloti CCNWSX0020]
Length = 322
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 156/307 (50%), Positives = 218/307 (71%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + ++ FEQ+L ++I++I+L EE D+ + E+ EAL +R ++ +K+++A
Sbjct: 2 RERQQLDDGINGLRRFEQQLNDNIELIELGDEEGDSAIVAEAEEALRQLRGEAAKKQVEA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
+LSGE D Y+EV +GAGGTES DWA+M+L+MY WA+R+GY+V LM+ GE AGIK
Sbjct: 62 MLSGEADQNDTYLEVHSGAGGTESQDWANMLLRMYTRWAERQGYKVELMEIQDGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
AT+ V G A+G+ K E GVHRLVRISP+DS RRHTSF+++ V P D S + INE
Sbjct: 122 SATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFSSIWVYPVV-DESIQIDINE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD RI+ +RS GAGGQH NTTDSAVRI H+P+GI CQ ERSQH+N+A A +L++R+
Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAVRITHMPSGIVVQCQQERSQHKNRAKAWDMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ ++ + S TDI WG+QIR+YVL PY++VKDLRT E S P VL+G+L+
Sbjct: 241 EAELKKREEAANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVESSSPGDVLDGELNE 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMEAALA 307
>gi|408786043|ref|ZP_11197783.1| peptide chain release factor 2 [Rhizobium lupini HPC(L)]
gi|408488232|gb|EKJ96546.1| peptide chain release factor 2 [Rhizobium lupini HPC(L)]
Length = 322
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 156/307 (50%), Positives = 216/307 (70%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + VKA EQ+L ++I++I+L E D E+ ++ +AL ++ ++ ++++A
Sbjct: 2 RERQQLDDSINGVKALEQQLRDNIELIELGEMEGDDEIVKDAEDALKALKSEANRRQVEA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
+LSGE D Y+EV +GAGGTES DWA+M+L+MY WA R G++V +++ GE AGIK
Sbjct: 62 MLSGEADGNDTYLEVHSGAGGTESQDWANMLLRMYTRWADREGFKVEVLEVHDGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI V G AFG+ K E GVHRLVRISP+DS RRHTSF++V V P D S + INE
Sbjct: 122 SATILVKGHNAFGWLKTESGVHRLVRISPYDSNARRHTSFSSVWVYPVV-DDSIQIDINE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD RI+ +RS GAGGQH NTTDSAVRI HIPTGI CQ ERSQH+N+A A +L++R+
Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIAVACQQERSQHKNRAKAWDMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
++E+ ++ + S TDI WG+QIR+YVL PY++VKDLRT E + P +VL+GDL+
Sbjct: 241 EVELQKREEAANAQAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTAPGNVLDGDLNE 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMEAALA 307
>gi|418406857|ref|ZP_12980176.1| peptide chain release factor 2 [Agrobacterium tumefaciens 5A]
gi|358007350|gb|EHJ99673.1| peptide chain release factor 2 [Agrobacterium tumefaciens 5A]
Length = 322
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 155/307 (50%), Positives = 215/307 (70%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + VKA EQ+L +++++I+L E D E+ ++ +AL +R ++ ++++A
Sbjct: 2 RERQQLDDSINGVKALEQQLKDNVELIELGEMEGDDEIVKDAEDALKALRSEANRRQVEA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
+LSGE D Y+EV +GAGGTES DWA+M+L+MY WA R G++V +++ GE AGIK
Sbjct: 62 MLSGEADSNDTYLEVHSGAGGTESQDWANMLLRMYTRWADREGFKVEVLEVHDGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI V G AFG+ K E GVHRLVRISP+DS RRHTSF++V V P D S + INE
Sbjct: 122 SATILVKGHNAFGWLKTESGVHRLVRISPYDSNARRHTSFSSVWVYPVV-DDSIQIDINE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD RI+ +RS GAGGQH NTTDSAVRI HIPTGI CQ ERSQH+N+A A +L++R+
Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIAVACQQERSQHKNRAKAWDMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
++E+ ++ S TDI WG+QIR+YVL PY+++KDLRT E + P +VL+GDL+
Sbjct: 241 EVELQKREDAANAQAASKTDIGWGHQIRSYVLQPYQLIKDLRTGVESTAPGNVLDGDLNQ 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMEAALA 307
>gi|383640705|ref|ZP_09953111.1| peptide chain release factor 2 [Sphingomonas elodea ATCC 31461]
Length = 321
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 159/308 (51%), Positives = 213/308 (69%), Gaps = 3/308 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + +A E EL + +++I++A E D E+ ++ +L + +S ++ A
Sbjct: 2 RERRRLDESISATRAIESELNDTVELIEMAEAEGDEEMAVDGTASLRALAERSDADKVKA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE DP Y+E+ AGAGGTES DWA M+ +MY WA+R GY+V L+D GE AGIK
Sbjct: 62 LLSGEADPNDTYVEINAGAGGTESNDWAEMLQRMYTRWAERHGYKVELVDYHAGEQAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
AT+ GE A+GYAK E GVHRLVRISPFDS RR TSFA+V V P D + ++INE
Sbjct: 122 SATLLFKGENAYGYAKTESGVHRLVRISPFDSNARRQTSFASVWVYP-VIDDNIDIEINE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
S+LRI+ +R+ GAGGQH NTTDSAVRI H+PTGI CQN+RSQH+N+A A L++R+
Sbjct: 181 SELRIDTYRASGAGGQHINTTDSAVRITHLPTGIVVQCQNQRSQHKNRAEAYNQLRARLY 240
Query: 376 QLEIA-RQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLD 434
+ E+A R+A NA + + TDI WG+QIR+YVL PY++VKDLRT + P VL+GDLD
Sbjct: 241 ERELAEREAAANAVNA-TKTDIGWGHQIRSYVLQPYQLVKDLRTGVTSTAPSDVLDGDLD 299
Query: 435 GFILSYLS 442
F+ + L+
Sbjct: 300 SFMAAALA 307
>gi|115352205|ref|YP_774044.1| peptide chain release factor 2 [Burkholderia ambifaria AMMD]
gi|115282193|gb|ABI87710.1| bacterial peptide chain release factor 2 (bRF-2) [Burkholderia
ambifaria AMMD]
Length = 406
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 154/333 (46%), Positives = 226/333 (67%), Gaps = 2/333 (0%)
Query: 109 NVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREE 168
+ RL ++ EL PN+W+D +A + RE L G + + A + +L + +D+ +LAREE
Sbjct: 72 SARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLTALDSDLRDALDLFELAREE 131
Query: 169 NDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQ 228
D + + S + + + + E + S DP +C+I++QAGAGGTE+ DWASM+L+
Sbjct: 132 GDEDTLVASEDDAKKLEARVGDIEFRRMFSNPADPNNCFIDIQAGAGGTEACDWASMLLR 191
Query: 229 MYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSG 288
Y + +R+G++ +++E G++AGIK AT+KV GEYA+G+ + E G+HRLVR SPFDS
Sbjct: 192 QYLRYCERKGFKAEVLEESDGDVAGIKNATVKVTGEYAYGFLRTETGIHRLVRKSPFDSS 251
Query: 289 KRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTG 348
RHTSF++V V P D S V++N +DLRI+ +R+ GAGGQH N TDSAVRI H+PTG
Sbjct: 252 GGRHTSFSSVFVYPEI-DDSIEVEVNPADLRIDTYRASGAGGQHINKTDSAVRITHMPTG 310
Query: 349 ITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLH 408
I CQN+RSQH+N+A AM +L+SR+ + E+ ++ + S TD+ WG+QIR+YVL
Sbjct: 311 IVVQCQNDRSQHRNRAEAMAMLKSRLYEAEMRKRQAEQDKLESSKTDVGWGHQIRSYVLD 370
Query: 409 PYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
R VKDLRTN E+S+ +VL+GDLD FI + L
Sbjct: 371 QSR-VKDLRTNVEMSNTRAVLDGDLDDFISASL 402
>gi|197285860|ref|YP_002151732.1| peptide chain release factor 2 [Proteus mirabilis HI4320]
gi|238693208|sp|B4F0M7.1|RF2_PROMH RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|194683347|emb|CAR44054.1| peptide chain release factor 2 [Proteus mirabilis HI4320]
Length = 365
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 154/354 (43%), Positives = 235/354 (66%), Gaps = 2/354 (0%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
+A+ QV++ L + RL ++AEL +P++W++P A + +E SL ++ +
Sbjct: 14 VAERTQVLRGYLDYDAKKERLEEVNAELEQPDVWNEPEKAQALGKERSSLEAIVETIDQL 73
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
EQ L + ++ LA E +D E E++ L + +K ++ E + SGE D CY+++Q
Sbjct: 74 EQGLEDVSGLLDLAVEADDEETFNEAVAELEGLNKKLEQLEFRRMFSGEYDSADCYLDLQ 133
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AG+GGTE+ DWASM+++MY WA+ RG++ +++E G++AG+K ATIK+ GEYA+G+ +
Sbjct: 134 AGSGGTEAQDWASMLMRMYLRWAESRGFKTEIIEESDGDVAGLKSATIKIIGEYAYGWLR 193
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
E GVHRLVR SPFDSG RRHTSF++ V P D + ++IN +DLRI+ +R+ GAGGQ
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEV-DDNIDIEINPADLRIDVYRASGAGGQ 252
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQ 391
H N T+SAVRI H+PTG+ CQN+RSQH+NK AM +++++ +LE+ ++
Sbjct: 253 HVNKTESAVRITHVPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNADKQVMED 312
Query: 392 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ +DI WG+QIR+YVL R +KDLRT E + +VL+GDLD FI + L A L
Sbjct: 313 NKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASLKAGL 365
>gi|33592241|ref|NP_879885.1| peptide chain release factor 2 [Bordetella pertussis Tohama I]
gi|33601278|ref|NP_888838.1| peptide chain release factor 2 [Bordetella bronchiseptica RB50]
gi|408416145|ref|YP_006626852.1| peptide chain release factor 2 [Bordetella pertussis 18323]
gi|81578745|sp|Q7VZ35.1|RF2_BORPE RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|81580061|sp|Q7WK44.1|RF2_BORBR RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|33571886|emb|CAE41402.1| peptide chain release factor 2 [Bordetella pertussis Tohama I]
gi|33575713|emb|CAE32791.1| peptide chain release factor 2 [Bordetella bronchiseptica RB50]
gi|401778315|emb|CCJ63718.1| peptide chain release factor 2 [Bordetella pertussis 18323]
Length = 367
Score = 315 bits (808), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 158/353 (44%), Positives = 235/353 (66%), Gaps = 10/353 (2%)
Query: 93 AQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFE 152
A+ Q +++ L + + RL +++AEL P +W+DP HA + RE SL ++ +
Sbjct: 17 AEREQALRRYLDYDAKSERLQVVNAELEDPAIWNDPKHAQDLGREKKSLEDVVETLTELG 76
Query: 153 QELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEK----ELDALLSGELDPCSCYI 208
L + ++++LA ++D +LEA+ + +EK E + + DP +C++
Sbjct: 77 SGLADSCELVELALADSDDA----TLEAIEHDADRFQEKLETLEFRRMFANPADPLNCFV 132
Query: 209 EVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFG 268
++QAGAGGTE+ DWASM+L+ Y +A+R+G++ +++E G++AG+K ATIK++GEYAFG
Sbjct: 133 DIQAGAGGTEAQDWASMLLRQYLKYAERKGFKAEILEESEGDVAGLKSATIKIEGEYAFG 192
Query: 269 YAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGA 328
Y + E GVHRLVR SPFDS RHTSFA+V V P D S V++N +DLRI+ +R+ GA
Sbjct: 193 YLRTETGVHRLVRKSPFDSSGGRHTSFASVFVYPEV-DESFEVEVNPADLRIDTYRASGA 251
Query: 329 GGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAE 388
GGQH N TDSAVRI H P+GI CQN+RSQH+N+A AM +L+S++ +LE+ + +
Sbjct: 252 GGQHINKTDSAVRITHAPSGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMTEQQK 311
Query: 389 HTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
S TD+ WG+QIR+YVL R +KDLRTN E+S+ VL+GDLD FI + L
Sbjct: 312 LEDSKTDVGWGHQIRSYVLDQSR-IKDLRTNVEISNTQKVLDGDLDPFIQASL 363
>gi|71065379|ref|YP_264106.1| peptide chain release factor 2 [Psychrobacter arcticus 273-4]
gi|71038364|gb|AAZ18672.1| bacterial peptide chain release factor 2 (bRF-2) [Psychrobacter
arcticus 273-4]
Length = 349
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 156/335 (46%), Positives = 223/335 (66%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++ EL P LW+DP A +I++E L G + V + E L + M++LA EE D
Sbjct: 17 RLEEVNLELENPELWNDPERATKINKEKSQLDGVIDVVVSLETTLEDASAMLELAVEEED 76
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
L + L ++ + E + SGE+DP +CY+++Q+G+GGTE+ DWA M+L+MY
Sbjct: 77 ESLLADVQAELDNAEKRVADLEFRRMFSGEMDPNNCYLDIQSGSGGTEAQDWAEMLLRMY 136
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA+ G++V +++ G +AGIK ATI++ G+YAFG+ + E+GVHRLVR SPFDS
Sbjct: 137 TRWAEAHGFKVDVIEVSAGGVAGIKSATIEIKGDYAFGWLRTEIGVHRLVRKSPFDSNNG 196
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSFAAV V P D + + +N +DLRI+ +RS GAGGQH NTTDSAVRI H P+G+
Sbjct: 197 RHTSFAAVFVSPEI-DDNIEIDVNPADLRIDTYRSSGAGGQHVNTTDSAVRITHEPSGVV 255
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
TCQNERSQH NKA+AM +L++++ +LE+ ++ + +D+ WG+QIR+YVL
Sbjct: 256 VTCQNERSQHGNKATAMKMLRAKLYELEMQKRMESQQAVEDGKSDVGWGSQIRSYVLDDS 315
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E + +VL+GDLD FI + L A L
Sbjct: 316 R-IKDLRTGVETFNTGAVLDGDLDQFIEASLKAGL 349
>gi|58039738|ref|YP_191702.1| peptide chain release factor 2 [Gluconobacter oxydans 621H]
gi|58002152|gb|AAW61046.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Gluconobacter
oxydans 621H]
Length = 322
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 152/310 (49%), Positives = 217/310 (70%), Gaps = 1/310 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE +L +++ V+ E E+ +++++LA E D L ++++ L + +++E+++
Sbjct: 2 RERTTLANQIEGVQRIESEVEGTLELVELAEMEGDESLVQDAVQTLRAIAEDVRKREIES 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D CY+EV AGAGGTE+ DWA M+L+MY WA++ GY+VT ++ GE AGIK
Sbjct: 62 LLSGEADSNDCYVEVNAGAGGTEAQDWAEMLLRMYTRWAEQHGYKVTFIEGSEGEQAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI+V G A+G+ K E GVHRLVRISPFD+ RR TSFA+V V P D S + IN+
Sbjct: 122 SATIQVSGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPVV-DDSIEIDIND 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SDLR++ FR+ GAGGQH N TDSA+RI HIPTGI CQ +RSQH+N+A AM +L++R+
Sbjct: 181 SDLRVDTFRASGAGGQHVNKTDSAIRITHIPTGIVVACQTDRSQHRNRAKAMEMLRARMY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ ++ A+ S TDI WG+QIR+YVL PY++VKDLRT E +P +VL+G LD
Sbjct: 241 EAELQKREAAAAQTEASKTDIGWGHQIRSYVLAPYQLVKDLRTGVEKGNPGAVLDGALDD 300
Query: 436 FILSYLSASL 445
F+ + L+ S+
Sbjct: 301 FMSASLAQSV 310
>gi|255323776|ref|ZP_05364902.1| peptide chain release factor 2 [Corynebacterium tuberculostearicum
SK141]
gi|255298956|gb|EET78247.1| peptide chain release factor 2 [Corynebacterium tuberculostearicum
SK141]
Length = 367
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 164/349 (46%), Positives = 230/349 (65%), Gaps = 13/349 (3%)
Query: 95 SIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQE 154
++ I+K + + L R+ L A+ P+LWDDP HA +++ E + K++++++
Sbjct: 15 TLTTIEKVMDPEALAARIRELEAQAGDPSLWDDPAHAQKVTSELSAAQAKVRKLESLRGR 74
Query: 155 LLEHIDMIKLAREENDTEL---ELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
L + M +LA EE DT L EL+SLE+ + + E+ +LSGE DP I ++
Sbjct: 75 LEDMPVMYELAEEEGDTSLADDELDSLESAI------ESLEVTTMLSGEYDPREAVINIR 128
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
+GAGG ++ DWA M+++MY WA++ G++V + D E AGIK AT V GEY +G
Sbjct: 129 SGAGGVDAADWAEMLMRMYTRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGEYMYGQLS 188
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
E G HRLVRISPFD+ RR TSFA V V+P + + H+ I ++D+R++ +RS G GGQ
Sbjct: 189 VEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVV-EQTDHIDIPDNDVRVDVYRSSGPGGQ 247
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ-AQMNAEHT 390
NTTDSAVR+ HIPTGI TCQNE+SQ QNKASAM VLQ+++ LE RQ Q +
Sbjct: 248 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKL--LERKRQEEQAELDAL 305
Query: 391 QSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILS 439
+ + SWGNQ+R+YVLHPY+MVKDLRTN+EV DP VL+GD+DGF+ S
Sbjct: 306 GAGGNASWGNQMRSYVLHPYQMVKDLRTNFEVGDPSKVLDGDIDGFLES 354
>gi|186476207|ref|YP_001857677.1| peptide chain release factor 2 [Burkholderia phymatum STM815]
gi|184192666|gb|ACC70631.1| peptide chain release factor 2 [Burkholderia phymatum STM815]
Length = 359
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 156/357 (43%), Positives = 235/357 (65%), Gaps = 6/357 (1%)
Query: 85 WKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGK 144
W++ A A A S + + +VRL ++ EL PN+W+D HA + +E L G
Sbjct: 5 WRTCAHAQASSGGI----FDYDAKSVRLIEVNKELEDPNVWNDSQHAQALGKEKKLLEGV 60
Query: 145 MKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPC 204
+ + + + +L + D+ +AREEND + + E + + + ++ E + S DP
Sbjct: 61 VDVLSSLDNDLRDTKDLFDMAREENDEDTLVACEEDVAKLTTRVEDMEFRRMFSNPADPN 120
Query: 205 SCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGE 264
+ +I++QAGAGGTE+ DWASM+L+ Y + +R+G++ +++E G++AGIK ATIKV+GE
Sbjct: 121 NAFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKTEVLEESEGDVAGIKSATIKVEGE 180
Query: 265 YAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFR 324
YA+G+ + E G+HRLVR SPFDS RHTSF++V V P D S +++N +DLRI+ +R
Sbjct: 181 YAYGFLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEI-DESFEIEVNPADLRIDTYR 239
Query: 325 SGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQ 384
+ GAGGQH N TDSAVRI HIP+GI CQN+RSQH+N+A AM +L+SR+ + E+ ++
Sbjct: 240 ASGAGGQHINKTDSAVRITHIPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEMRKRQS 299
Query: 385 MNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
+ +D+ WG+QIR+YVL R +KDLRTN E+S+ SVL+GDLD FI + L
Sbjct: 300 EQDKLEAGKSDVGWGHQIRSYVLDNSR-IKDLRTNVEISNTKSVLDGDLDAFISASL 355
>gi|304391525|ref|ZP_07373467.1| peptide chain release factor 2 [Ahrensia sp. R2A130]
gi|303295754|gb|EFL90112.1| peptide chain release factor 2 [Ahrensia sp. R2A130]
Length = 374
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 159/354 (44%), Positives = 233/354 (65%), Gaps = 2/354 (0%)
Query: 89 AAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEV 148
A I Q+I ++++ L W+ N RL L+A P+LW+DP A + +E L + +
Sbjct: 9 ADEITQAISLLRRHLDWEKANTRLEELNAASEDPDLWNDPGKAQLLMKERQQLETGITSI 68
Query: 149 KAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYI 208
E +L + D+I+LA E+D ++ E+ AL + +++ LLSGE D Y
Sbjct: 69 NGLEGDLGDTKDLIELAEMEDDADVLAEAESALRELHADLGKRQAATLLSGEADANDTYF 128
Query: 209 EVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFG 268
EV +GAGGTES DWA+M+L+MY WA+ GY+V + G+ AGIK AT+ V G A+G
Sbjct: 129 EVHSGAGGTESNDWANMLLRMYIRWAETNGYKVEVQATTSGDEAGIKAATVLVKGANAYG 188
Query: 269 YAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGA 328
Y K E GVHRLVRISP+DS +RHTSF++V V P D + + + ++++R++ FRS GA
Sbjct: 189 YMKTESGVHRLVRISPYDSQAKRHTSFSSVWVYP-VIDDNIEIIVPDNEIRLDTFRSSGA 247
Query: 329 GGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAE 388
GGQH NTTDSAVRI HIPTGI T +E+SQHQN+A+AM L+SR+ + E+ ++ +
Sbjct: 248 GGQHVNTTDSAVRITHIPTGIVVTS-SEKSQHQNRANAMKALKSRLYEAEMQKRNEATQA 306
Query: 389 HTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
++ +DI WG+QIR+YVL PY++VKDLRT E ++P +VL+GDL+ F+ + L+
Sbjct: 307 AHEAKSDIGWGHQIRSYVLQPYQLVKDLRTGVESTNPSAVLDGDLNAFMEAALA 360
>gi|209964906|ref|YP_002297821.1| peptide chain release factor 2 PrfB [Rhodospirillum centenum SW]
gi|209958372|gb|ACI99008.1| peptide chain release factor 2 PrfB [Rhodospirillum centenum SW]
Length = 319
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 151/318 (47%), Positives = 219/318 (68%), Gaps = 1/318 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + + E++L + +++I+LA E D E+ ++ + + ++ ++ + EL++
Sbjct: 2 REKTQLENALTGTRELERDLRDSLELIELAEAEGDAEMVADAEKTIAALKERAAKMELES 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D C++EV +GAGGTES DWA M+L+MY WA++ GY+V +DE PGE AGIK
Sbjct: 62 LLSGEADANDCFLEVNSGAGGTESQDWALMLLRMYTRWAEQHGYKVDELDETPGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI++ G +G+ K E GVHRLVRISPFDS RRHTSFA+V+V P D V+INE
Sbjct: 122 SATIQIKGHNGYGWLKTESGVHRLVRISPFDSQARRHTSFASVSVTPVIDDRIV-VEINE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
D++++ +RS GAGGQH N TDSAVR+ H+PTGI CQ ERSQH+N+A A +L++R+
Sbjct: 181 KDVKVDTYRSSGAGGQHVNKTDSAVRLTHLPTGIVVACQQERSQHKNRAKAWDMLRARIY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
++E+ ++ + A + T+I WG+QIR+YVL PY+MVKDLRT E SD VL+GDLD
Sbjct: 241 EMELRKREEAAAALEATKTEIGWGHQIRSYVLQPYQMVKDLRTGVETSDSGGVLDGDLDR 300
Query: 436 FILSYLSASLDKDEGGQQ 453
F+ + L+ + G++
Sbjct: 301 FLQAALAQRIKGHADGEE 318
>gi|347761175|ref|YP_004868736.1| translation peptide chain release factor 2 [Gluconacetobacter
xylinus NBRC 3288]
gi|347580145|dbj|BAK84366.1| translation peptide chain release factor 2 [Gluconacetobacter
xylinus NBRC 3288]
Length = 322
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 153/302 (50%), Positives = 220/302 (72%), Gaps = 1/302 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L +++ V+ E ++ + +++++LA E D+ + E+L AL + ++K +E ++
Sbjct: 2 RERTLLANQIEGVQRLEADVNDTLELVELAEMEGDSAVVAEALAALRALAEEAKRRETES 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D CY+EV AGAGGTE+ DWA M+L+MY WA++ GY+VT+M+ GE AGIK
Sbjct: 62 LLSGEADSNDCYLEVNAGAGGTEAQDWAEMLLRMYTRWAEQHGYKVTMMESSEGEQAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI+V G A+G+ K E GVHRLVRISPFD+ RR TSFA+V V P D S ++INE
Sbjct: 122 SATIQVSGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPVV-DDSIEIEINE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
+DLR++ FR+ GAGGQH N T+SA+RI HIPTGI CQ +RSQH+N+A+AM +L++R+
Sbjct: 181 ADLRVDTFRASGAGGQHVNKTESAIRITHIPTGIVVACQTDRSQHRNRATAMTMLKARMY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ ++ A+ S TDI WG+QIR+YVL PY++VKDLRTN E ++PD++L+GD+D
Sbjct: 241 EQELQKREAAAAQTEASKTDIGWGHQIRSYVLAPYQLVKDLRTNVEKTNPDAILDGDIDD 300
Query: 436 FI 437
F+
Sbjct: 301 FM 302
>gi|408792601|ref|ZP_11204211.1| peptide chain release factor 2 [Leptospira meyeri serovar Hardjo
str. Went 5]
gi|408464011|gb|EKJ87736.1| peptide chain release factor 2 [Leptospira meyeri serovar Hardjo
str. Went 5]
Length = 375
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 163/374 (43%), Positives = 233/374 (62%), Gaps = 21/374 (5%)
Query: 78 LDESEGDWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISRE 137
+D S D K + + ++ Q ++ RL+ L + N P LWD P A ++++
Sbjct: 1 MDRSLKDLKKQTSEMIETFQSYWTAQNFQEDYDRLSSLIEKANDPKLWDSPDQAKTVTQK 60
Query: 138 HGSLMGKMKEVKAFEQELLEHIDMIKLAREE----------NDTELELESLEALLTMRRK 187
L K+ ++EL++ D+I+L EE +D + E+ E L
Sbjct: 61 RNELQLKLDPWLDLKKELIDFPDLIELTSEEMGESGLKSLNDDFDRMFETFENL------ 114
Query: 188 SKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEM 247
+ LDAL +G+ D + +I + GAGGTES DWA M+L+MY + +++GYR L+D
Sbjct: 115 ---QMLDAL-AGKDDGKAAFINIHPGAGGTESQDWADMLLRMYTRFCEQKGYRAELVDYQ 170
Query: 248 PGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDS 307
PGE AGIK AT+ + G++ FGY K E GVHRLVRISPFDS KRRHTSFA+V V P D
Sbjct: 171 PGETAGIKNATLYIQGDHPFGYLKCESGVHRLVRISPFDSNKRRHTSFASVYVTPEV-DD 229
Query: 308 STHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAM 367
V I E DLR++ +RS GAGGQH NTTDSAVRI HIPTG+ +CQ ERSQ +N+ +AM
Sbjct: 230 DIQVNIEEKDLRVDVYRSSGAGGQHVNTTDSAVRITHIPTGVVVSCQMERSQIKNRDTAM 289
Query: 368 GVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDS 427
+L++R+ ++E + + NA+ DISWG+QIR+YV HPY +VKD RT++E + +
Sbjct: 290 KMLRARLYEMEKQKAEEENAKKAGEKRDISWGSQIRSYVFHPYNLVKDHRTDFETGNVHA 349
Query: 428 VLEGDLDGFILSYL 441
V++GDL+ FI++YL
Sbjct: 350 VMDGDLEDFIIAYL 363
>gi|311739769|ref|ZP_07713603.1| peptide chain release factor RF2 [Corynebacterium pseudogenitalium
ATCC 33035]
gi|311304842|gb|EFQ80911.1| peptide chain release factor RF2 [Corynebacterium pseudogenitalium
ATCC 33035]
Length = 367
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 164/349 (46%), Positives = 230/349 (65%), Gaps = 13/349 (3%)
Query: 95 SIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQE 154
++ I+K + + L R+ L A+ P+LWDDP HA +++ E + K++++++
Sbjct: 15 TLTTIEKVMDPEALAARIRELEAQAGDPSLWDDPAHAQQVTSELSAAQAKVRKLESLRVR 74
Query: 155 LLEHIDMIKLAREENDTEL---ELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
L + M +LA EE DT L EL+SLE+ + + E+ +LSGE DP I ++
Sbjct: 75 LEDMPVMYELAEEEGDTSLADDELDSLESAI------ESLEVTTMLSGEYDPREAVINIR 128
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
+GAGG ++ DWA M+++MY WA++ G++V + D E AGIK AT V GEY +G
Sbjct: 129 SGAGGVDAADWAEMLMRMYTRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGEYMYGQLS 188
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
E G HRLVRISPFD+ RR TSFA V V+P + + H+ I ++D+R++ +RS G GGQ
Sbjct: 189 VEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVV-EQTDHIDIPDNDVRVDVYRSSGPGGQ 247
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ-AQMNAEHT 390
NTTDSAVR+ HIPTGI TCQNE+SQ QNKASAM VLQ+++ LE RQ Q +
Sbjct: 248 SVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKL--LERKRQEEQAELDAL 305
Query: 391 QSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILS 439
+ + SWGNQ+R+YVLHPY+MVKDLRTN+EV DP VL+GD+DGF+ S
Sbjct: 306 GAGGNASWGNQMRSYVLHPYQMVKDLRTNFEVGDPSKVLDGDIDGFLES 354
>gi|406989550|gb|EKE09321.1| hypothetical protein ACD_16C00192G0003 [uncultured bacterium]
Length = 337
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 151/335 (45%), Positives = 224/335 (66%), Gaps = 5/335 (1%)
Query: 115 LSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELE 174
+ E+ P+LWDDP+ A +I RE L + + + QEL + D+I+LA END E
Sbjct: 1 MEKEVLNPSLWDDPLRAQKIMREREYLTEAINRITSTTQELKDATDLIELAEVENDRETL 60
Query: 175 LESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWA 234
L++ + + + ++ + L+ LLSGE D +C++E+ AGAGGTE+ DWA M+ +MY WA
Sbjct: 61 LDAEKDIEKLHQQIQRLRLETLLSGEADANNCFLEIHAGAGGTEAQDWALMLTRMYSRWA 120
Query: 235 QRRGYRVTLMDEMPGEIAGIKRATIKVDGE----YAFGYAKAEVGVHRLVRISPFDSGKR 290
+ +GY + ++E GE AGIK AT KV + + +G+ K E G+HRLVRISPFD+ R
Sbjct: 121 EMKGYVIEWIEESAGEEAGIKSATFKVSAQKSANHPYGWLKGESGIHRLVRISPFDANAR 180
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSFA+V V P D+ +QI + DLRI+ +R+ GAGGQH N TDSA+RI H+PTG+
Sbjct: 181 RHTSFASVWVYPEVEDT-IDIQIEDKDLRIDTYRASGAGGQHVNKTDSAIRITHLPTGVV 239
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+N+A AM +L++R+ + E+ ++ + + ++I WG+QIR+YVL PY
Sbjct: 240 VQCQNDRSQHRNRAQAMSMLKARLYEFELKKREEAAQALETTKSEIGWGHQIRSYVLQPY 299
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+MVKDLRTN E + VL+GD+D F+ + L+ +
Sbjct: 300 QMVKDLRTNVEKGNALGVLDGDIDAFLEATLAQKI 334
>gi|53719890|ref|YP_108876.1| peptide chain release factor 2 [Burkholderia pseudomallei K96243]
gi|53723794|ref|YP_103319.1| peptide chain release factor 2 [Burkholderia mallei ATCC 23344]
gi|226830773|ref|YP_001066897.2| peptide chain release factor 2 [Burkholderia pseudomallei 1106a]
gi|254200276|ref|ZP_04906642.1| peptide chain release factor 2 [Burkholderia mallei FMH]
gi|254209352|ref|ZP_04915698.1| peptide chain release factor 2 [Burkholderia mallei JHU]
gi|81604734|sp|Q62J00.1|RF2_BURMA RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|81607820|sp|Q63SP0.1|RF2_BURPS RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|229576668|sp|A3NX26.3|RF2_BURP0 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|52210304|emb|CAH36283.1| peptide chain release factor 2 [Burkholderia pseudomallei K96243]
gi|52427217|gb|AAU47810.1| peptide chain release factor 2, programmed frameshift [Burkholderia
mallei ATCC 23344]
gi|147749872|gb|EDK56946.1| peptide chain release factor 2 [Burkholderia mallei FMH]
gi|147750125|gb|EDK57196.1| peptide chain release factor 2 [Burkholderia mallei JHU]
gi|213385360|gb|ABN92528.3| peptide chain release factor 2, programmed frameshift [Burkholderia
pseudomallei 1106a]
Length = 367
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 163/362 (45%), Positives = 235/362 (64%), Gaps = 13/362 (3%)
Query: 91 AIAQSIQVIKKR-------LQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
AI S+ +++R L + + RL ++ +L PN+W+D +A + RE SL
Sbjct: 8 AIESSLADLRRRAGELRGYLDYDVKSERLAEVNKQLEDPNVWNDSKNAQALGREKKSLES 67
Query: 144 KMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDP 203
+ + A + +L + D+ +LA EE D E + + + + + E + S DP
Sbjct: 68 VVTTLTALDNDLRDAQDLFELAHEEGDEETLVATESDAAKLEARVADIEFRRMFSNPADP 127
Query: 204 CSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDG 263
+C+I++QAGAGGTE+ DWASM+L+ Y + +R+G++ +++E G++AGIK ATIKV G
Sbjct: 128 NNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATIKVSG 187
Query: 264 EYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERF 323
EYA+GY + E G+HRLVR SPFDS RHTSF++V V P D S V+IN +DLRI+ +
Sbjct: 188 EYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEI-DDSIEVEINPADLRIDTY 246
Query: 324 RSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQA 383
R+ GAGGQH N TDSAVRI H+PTGI CQN+RSQH+N+A AM +L+SR+ + E+ ++
Sbjct: 247 RASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFEAELRKRQ 306
Query: 384 QMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSA 443
+ S TD+ WG+QIR+YVL R VKDLRTN E+S+ +VL+GDLD FI SA
Sbjct: 307 AEQDKLESSKTDVGWGHQIRSYVLDQSR-VKDLRTNVEMSNTKAVLDGDLDDFI----SA 361
Query: 444 SL 445
SL
Sbjct: 362 SL 363
>gi|222085647|ref|YP_002544177.1| peptide chain release factor 2 [Agrobacterium radiobacter K84]
gi|221723095|gb|ACM26251.1| peptide chain release factor 2 [Agrobacterium radiobacter K84]
Length = 345
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 157/331 (47%), Positives = 229/331 (69%), Gaps = 1/331 (0%)
Query: 112 LNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDT 171
++ L+ + PNLW+D A ++ RE L + V+A EQ++ +++++I+L EE D
Sbjct: 1 MDWLNNKSEDPNLWNDATEAQKLMRERQQLDDGISGVRALEQQVADNVELIELGEEEGDA 60
Query: 172 ELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYK 231
++ E+ EAL ++ ++ ++++A+LSGE D Y+EV +GAGGTES DWA+M+L+MY
Sbjct: 61 DVVREAEEALKALKTEAARRQVEAMLSGEADSNDTYVEVHSGAGGTESQDWANMLLRMYT 120
Query: 232 SWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRR 291
WA+R+ ++V L++ GE AGIK AT+ V G A+G+ K E GVHRLVRISP+DS RR
Sbjct: 121 RWAERQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARR 180
Query: 292 HTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITA 351
HTSF+++ + P D S + INE D RI+ +RS GAGGQH NTTDSAVRI HIPTGI
Sbjct: 181 HTSFSSIWIYP-VVDDSIQIDINEGDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVV 239
Query: 352 TCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYR 411
CQ ERSQH+N+A A +L++R+ + E+ ++ + S TDI WG+QIR+YVL PY+
Sbjct: 240 QCQQERSQHKNRAKAWDMLRARMYEAELMKREEAANAEAASKTDIGWGHQIRSYVLQPYQ 299
Query: 412 MVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
+VKDLRT + PD VL+GDL+ F+ + L+
Sbjct: 300 LVKDLRTGVTSTAPDDVLDGDLNEFMEAALA 330
>gi|373457567|ref|ZP_09549334.1| Peptide chain release factor 2 [Caldithrix abyssi DSM 13497]
gi|371719231|gb|EHO41002.1| Peptide chain release factor 2 [Caldithrix abyssi DSM 13497]
Length = 367
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 165/358 (46%), Positives = 227/358 (63%), Gaps = 17/358 (4%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISRE---HGSLMGKMKEV 148
+ Q ++ ++ L N ++ L + + W+D A ++ ++ H + + V
Sbjct: 12 LEQRVKELRGYLDIDNRTEQIKRLEEKTGEDGFWNDQEKAQKVLKQINRHKEWVDAWQSV 71
Query: 149 KAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDAL-----LSGELDP 203
+E I+M+ E E E+L+ L K EKE++AL LSG DP
Sbjct: 72 NNLLEEAKILIEML--------AEDESEALKDELVSHFKKMEKEINALEFKRMLSGRDDP 123
Query: 204 CSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDG 263
+ + + GAGGTES DWASM+++MY +A+R+G+ +MD PGE AGIK TI+V G
Sbjct: 124 KNAILTIHPGAGGTESQDWASMLMRMYLRFAERQGFETEIMDYQPGEEAGIKSVTIEVKG 183
Query: 264 EYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERF 323
YA+GY KAE GVHRLVRISPFD+ KRRHTSFA+V VIP D + V+IN SDLRI+ +
Sbjct: 184 NYAYGYLKAENGVHRLVRISPFDANKRRHTSFASVFVIPEI-DENIDVEINPSDLRIDTY 242
Query: 324 RSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQA 383
R+ GAGGQH N TDSA+RI H+PTGI CQNERSQH+NKA+A+ +L +R+ QL++ Q
Sbjct: 243 RASGAGGQHVNKTDSAIRITHLPTGIVVQCQNERSQHKNKANALKILAARLYQLKLEEQL 302
Query: 384 QMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
E+ +S DI+WG+QIR+YV HPY MVKD RTNYE S+ V++GD+ FI YL
Sbjct: 303 AKKKEYEESKRDIAWGSQIRSYVFHPYNMVKDHRTNYETSNVQQVMDGDIYPFIEKYL 360
>gi|154253713|ref|YP_001414537.1| peptide chain release factor 2 [Parvibaculum lavamentivorans DS-1]
gi|154157663|gb|ABS64880.1| peptide chain release factor 2 [Parvibaculum lavamentivorans DS-1]
Length = 322
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 159/310 (51%), Positives = 211/310 (68%), Gaps = 1/310 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + +A E L +++++I++ E D + E+ AL R + E E++
Sbjct: 3 RERTRLEEAIGRYRALEASLNDNLELIEMGEAEGDAAIVAEAEAALKAARDVAAEAEIET 62
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+E+ AGAGGTES DWA M+L+MY WA+R+GY+V LM+ GE AGIK
Sbjct: 63 LLSGEADANDTYVEIHAGAGGTESQDWAQMLLRMYTRWAERKGYKVELMERHDGEEAGIK 122
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI V G AFG+ K E GVHRLVRISP+DS RRHTSF++V V P D ++++E
Sbjct: 123 SATILVKGHNAFGWLKTESGVHRLVRISPYDSAARRHTSFSSVWVYPVV-DDKIDIEVSE 181
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
+D+RI+ +RS GAGGQH NTTDSAVRI HIPTGI CQNERSQH+N+A+A +L++R+
Sbjct: 182 ADVRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVACQNERSQHKNRATAWDMLRARLY 241
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ ++ A TDI WG+QIR+YVL PY+MVKDLRT E SD D VL GDLD
Sbjct: 242 EAELQKREDAAAAQASGKTDIGWGHQIRSYVLQPYQMVKDLRTGVETSDTDGVLGGDLDP 301
Query: 436 FILSYLSASL 445
F+ + L+A +
Sbjct: 302 FMAAALAARV 311
>gi|218291021|ref|ZP_03495062.1| peptide chain release factor 2 [Alicyclobacillus acidocaldarius
LAA1]
gi|218239039|gb|EED06244.1| peptide chain release factor 2 [Alicyclobacillus acidocaldarius
LAA1]
Length = 342
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 157/328 (47%), Positives = 217/328 (66%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
P+ WDDP A +I E + + ++ E L + ++LA+EE+D +L E+
Sbjct: 4 PDFWDDPDRAQKIISEMNGVKSVVDTMRRLESLLQDAEVALQLAQEEDDHDLFAEANRLA 63
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
++ + E EL +LSGE D + +E+ GAGGTES DWASM+L+MY WA+ GY+V
Sbjct: 64 EQLKSEMDEFELQVMLSGEYDKNNAILELHPGAGGTESQDWASMLLRMYTRWAEDHGYKV 123
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
++D +PGE AGIK T+ + G A+GY KAE GVHRLVRISPFD+ RRHTSFA+V VI
Sbjct: 124 EVLDYLPGEEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFASVDVI 183
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P + ++I +LRI+ +RS GAGGQH NTTDSAVRI HIPTGI TCQ+ERSQ Q
Sbjct: 184 PEIAEDDDSIEIRPEELRIDTYRSTGAGGQHVNTTDSAVRITHIPTGIVVTCQSERSQIQ 243
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
N+A AM +L+SR+ + Q A+ +I+WG+QIR+YV HPY +VKD RTNYE
Sbjct: 244 NRARAMEILKSRLAAKRREEREQELAQLRGEQKEIAWGSQIRSYVFHPYSLVKDHRTNYE 303
Query: 422 VSDPDSVLEGDLDGFILSYLSASLDKDE 449
S+ +V++G++D FI +YL L +++
Sbjct: 304 TSNTQAVMDGEIDPFIHAYLRWQLAREQ 331
>gi|374287369|ref|YP_005034454.1| peptide chain release factor 2 [Bacteriovorax marinus SJ]
gi|301165910|emb|CBW25483.1| peptide chain release factor 2 [Bacteriovorax marinus SJ]
Length = 358
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 154/334 (46%), Positives = 222/334 (66%), Gaps = 3/334 (0%)
Query: 109 NVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHID-MIKLARE 167
+ RL+ +S WDD +A ++ +E S++ + E +EL + + +++ A
Sbjct: 14 SARLSEISDMEAMEGFWDDSDNAAKVQKEK-SVLSDVVETYTTLKELFDEFEVLVEFANG 72
Query: 168 ENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVL 227
E D + LE+++ ++ EL LLSGE+DP + + + AGAGGTES DWASM+
Sbjct: 73 EEDEDSALEAIDCYDKFLKQFNAAELKVLLSGEVDPNNAIVSINAGAGGTESCDWASMLF 132
Query: 228 QMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDS 287
+M WA+ + ++V ++D G+ AGIK AT+ + G YA+GY K+E+GVHRLVRISPFDS
Sbjct: 133 RMINRWAESKAFKVQVLDVQDGDSAGIKSATMTISGNYAYGYLKSEIGVHRLVRISPFDS 192
Query: 288 GKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPT 347
RRHTSF+++ V P D + ++I + DL+I+ +RSGGAGGQ NTTDSAVRI HIPT
Sbjct: 193 NARRHTSFSSIFVSPEI-DDNIEIEILDKDLKIDVYRSGGAGGQSVNTTDSAVRITHIPT 251
Query: 348 GITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVL 407
TCQNERSQ QNK AM VL+SR+ +LE+ ++ AE S +I WG QIR+YVL
Sbjct: 252 NTVVTCQNERSQLQNKLQAMKVLRSRLYELEMEKRRAQEAETEASKQEIGWGAQIRSYVL 311
Query: 408 HPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
HPY++VKD RT++E + + VL+GDLDGF+ ++L
Sbjct: 312 HPYKLVKDTRTSFESGNAEKVLDGDLDGFMDAFL 345
>gi|260575218|ref|ZP_05843218.1| peptide chain release factor 2 [Rhodobacter sp. SW2]
gi|259022478|gb|EEW25774.1| peptide chain release factor 2 [Rhodobacter sp. SW2]
Length = 375
Score = 314 bits (805), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 164/353 (46%), Positives = 233/353 (66%), Gaps = 4/353 (1%)
Query: 91 AIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKA 150
AI +S+ ++ +R+ + RL ++A + +LW DP A ++ RE +L+ + K
Sbjct: 11 AIGRSLALLGQRMDVETAPHRLEEMNAMIEDGDLWSDPARAQKLMRERQALLDAISTHKL 70
Query: 151 FEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEV 210
E L +++++I++ E D E+ E+ +AL + ++ KEL+ALL GE D ++EV
Sbjct: 71 IETGLRDNVELIEMGEAEGDAEIVSEAEQALRDLVELARGKELEALLDGEADGNDTFLEV 130
Query: 211 QAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYA 270
AGAGGTES DWASM+ +MY WA+++GY+V L GE AGIK A K+ G A+G+
Sbjct: 131 NAGAGGTESCDWASMLARMYVRWAEKKGYKVELQSMSDGEEAGIKSAAYKISGPNAYGWL 190
Query: 271 KAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGG 330
K+E GVHRLVRISP+DS RRHTSF++V V P D + + I D+RI+ +RS GAGG
Sbjct: 191 KSESGVHRLVRISPYDSAARRHTSFSSVWVYPVV-DDNIEIDIPAGDIRIDTYRSSGAGG 249
Query: 331 QHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI-ARQAQMNAEH 389
QH NTTDSAVRI H+PT I T + +SQHQN+ + M L++R+ QLE+ R A +NA+H
Sbjct: 250 QHVNTTDSAVRITHLPTNIVVTS-SMKSQHQNREACMVALRARLYQLELDKRNAAVNAQH 308
Query: 390 TQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
++ D WGNQIR+YVL PY+MVKDLRT E SD VL+GDLD F+ + L+
Sbjct: 309 -EAKGDAGWGNQIRSYVLQPYQMVKDLRTGVETSDTQGVLDGDLDRFMAATLA 360
>gi|333899355|ref|YP_004473228.1| peptide chain release factor 2 [Pseudomonas fulva 12-X]
gi|333114620|gb|AEF21134.1| peptide chain release factor 2 [Pseudomonas fulva 12-X]
Length = 364
Score = 314 bits (804), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 159/355 (44%), Positives = 236/355 (66%), Gaps = 4/355 (1%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
+++ Q I+ L + + + RL ++ EL PN+W+ P +A + RE +L ++ +
Sbjct: 13 LSERTQTIRGYLDYDHKHDRLVEVNRELEDPNVWNKPEYAQSLGRERSTLAQIVETIDDL 72
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEK-ELDALLSGELDPCSCYIEV 210
L + D++++A EEND + ++ + A + R+ EK E + S E+DP +CY+++
Sbjct: 73 TGSLADSRDLLEMAVEEND-QGAVDDVAAEIERLREILEKLEFRRMFSHEMDPNNCYLDI 131
Query: 211 QAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYA 270
QAG+GGTE+ DWA+++L+MY WA +RG+ +++ GE+AGIK AT+ + GEYAFG+
Sbjct: 132 QAGSGGTEAQDWANILLRMYLRWADKRGFNAEIVELSEGEVAGIKGATVHIKGEYAFGWL 191
Query: 271 KAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGG 330
+ E+GVHRLVR SPFDSG RRHTSF+AV V P D ++IN +DLRI+ +RS GAGG
Sbjct: 192 RTEIGVHRLVRKSPFDSGARRHTSFSAVFVSPEI-DDKVEIEINPADLRIDTYRSSGAGG 250
Query: 331 QHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHT 390
QH NTTDSAVRI H+PT CQNERSQH NK +AM +L++++ +LE+ ++ +
Sbjct: 251 QHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQKRNAASQALE 310
Query: 391 QSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
S +DI WG+QIR+YVL R +KDLRT E SD VL+GDLDG++ + L L
Sbjct: 311 DSKSDIGWGHQIRSYVLDDSR-IKDLRTGVERSDCQKVLDGDLDGYLEASLKQGL 364
>gi|217420389|ref|ZP_03451894.1| peptide chain release factor 2, programmed frameshift [Burkholderia
pseudomallei 576]
gi|226195477|ref|ZP_03791065.1| peptide chain release factor 2, programmed frameshift [Burkholderia
pseudomallei Pakistan 9]
gi|237813009|ref|YP_002897460.1| peptide chain release factor 2 [Burkholderia pseudomallei MSHR346]
gi|238561621|ref|ZP_00441741.2| peptide chain release factor 2, programmed frameshift [Burkholderia
mallei GB8 horse 4]
gi|242317384|ref|ZP_04816400.1| peptide chain release factor 2, programmed frameshift [Burkholderia
pseudomallei 1106b]
gi|251767233|ref|ZP_04820018.1| peptide chain release factor 2, programmed frameshift [Burkholderia
mallei PRL-20]
gi|284159918|ref|YP_001059616.2| peptide chain release factor 2 [Burkholderia pseudomallei 668]
gi|217395801|gb|EEC35818.1| peptide chain release factor 2, programmed frameshift [Burkholderia
pseudomallei 576]
gi|225932437|gb|EEH28436.1| peptide chain release factor 2, programmed frameshift [Burkholderia
pseudomallei Pakistan 9]
gi|237504244|gb|ACQ96562.1| peptide chain release factor 2, programmed frameshift [Burkholderia
pseudomallei MSHR346]
gi|238524226|gb|EEP87660.1| peptide chain release factor 2, programmed frameshift [Burkholderia
mallei GB8 horse 4]
gi|242140623|gb|EES27025.1| peptide chain release factor 2, programmed frameshift [Burkholderia
pseudomallei 1106b]
gi|243063468|gb|EES45654.1| peptide chain release factor 2, programmed frameshift [Burkholderia
mallei PRL-20]
gi|261825971|gb|ABN00993.2| peptide chain release factor 2, programmed frameshift [Burkholderia
mallei NCTC 10229]
gi|261835054|gb|ABO05438.2| peptide chain release factor 2, programmed frameshift [Burkholderia
mallei NCTC 10247]
gi|283775112|gb|ABN84239.2| peptide chain release factor 2, programmed frameshift [Burkholderia
pseudomallei 668]
Length = 367
Score = 314 bits (804), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 158/335 (47%), Positives = 224/335 (66%), Gaps = 6/335 (1%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++ +L PN+W+D +A + RE SL + + A + +L + D+ +LA EE D
Sbjct: 35 RLAEVNKQLEDPNVWNDSKNAQALGREKKSLESVVTTLTALDNDLRDAQDLFELAHEEGD 94
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
E + + + + + E + S DP +C+I++QAGAGGTE+ DWASM+L+ Y
Sbjct: 95 EETLVATESDAAKLEARVADIEFRRMFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQY 154
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
+ +R+G++ +++E G++AGIK ATIKV GEYA+GY + E G+HRLVR SPFDS
Sbjct: 155 LRYCERKGFKAEVLEESDGDVAGIKNATIKVSGEYAYGYLRTETGIHRLVRKSPFDSSGG 214
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSF++V V P D S V+IN +DLRI+ +R+ GAGGQH N TDSAVRI H+PTGI
Sbjct: 215 RHTSFSSVFVYPEI-DDSIEVEINPADLRIDTYRASGAGGQHINKTDSAVRITHMPTGIV 273
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+N+A AM +L+SR+ + E+ ++ + S TD+ WG+QIR+YVL
Sbjct: 274 VQCQNDRSQHRNRAEAMAMLKSRLFEAELRKRQAEQDKLESSKTDVGWGHQIRSYVLDQS 333
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R VKDLRTN E+S+ +VL+GDLD FI SASL
Sbjct: 334 R-VKDLRTNVEMSNTKAVLDGDLDDFI----SASL 363
>gi|319789223|ref|YP_004150856.1| hypothetical protein Theam_0242 [Thermovibrio ammonificans HB-1]
gi|317113725|gb|ADU96215.1| hypothetical protein Theam_0242 [Thermovibrio ammonificans HB-1]
Length = 373
Score = 314 bits (804), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 157/359 (43%), Positives = 230/359 (64%), Gaps = 3/359 (0%)
Query: 84 DWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
+ K + + + I+ + RL+ + E+ P+ W+DP A +S E L
Sbjct: 7 ELKEQVSKLKEKYAEIRGYFDLDKMKRRLSEIEEEMASPDFWNDPKKAQSLSVERNHLEQ 66
Query: 144 KMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEK-ELDALLSGELD 202
+++ K+ EQ++ + +I++A EE D L L+ E +L+ K+ ++ E+ +LSGE D
Sbjct: 67 ELEAFKSVEQKIEDSEVLIEMAEEEQDGSL-LDEAEQMLSDLDKTLDRLEVKKVLSGEFD 125
Query: 203 PCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVD 262
+ + + AGAGGTES DWA M+++MY WA+R+G+ V ++D E AGIK AT+ +
Sbjct: 126 KNNAIVTIHAGAGGTESCDWAQMLMRMYIRWAERKGFEVEILDLQENEEAGIKSATLLIK 185
Query: 263 GEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIER 322
G YA+G+ +AE G HRLVRISPFD+ RRHTSF V V+P D V+I E DLRI+
Sbjct: 186 GPYAYGFLRAEHGTHRLVRISPFDANARRHTSFCGVIVVPEI-DEDIEVEIKEEDLRIDT 244
Query: 323 FRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ 382
+R+ GAGGQH N TDSAVRI HIPTGI TCQ+ERSQ QN+ AM +L++R+ +LE ++
Sbjct: 245 YRASGAGGQHVNKTDSAVRITHIPTGIVVTCQSERSQIQNRQRAMKILKARLYELERQKR 304
Query: 383 AQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
+ A+ I+WGNQIR+Y+ PYR+VKD RT E S+ D+V++GD+D FI +YL
Sbjct: 305 EEKIAQARGEHKSIAWGNQIRSYIFQPYRLVKDHRTGVETSNIDAVMDGDIDLFIEAYL 363
>gi|163857078|ref|YP_001631376.1| peptide chain release factor 2 [Bordetella petrii DSM 12804]
gi|163260806|emb|CAP43108.1| peptide chain release factor 2 [Bordetella petrii]
Length = 337
Score = 314 bits (804), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 155/332 (46%), Positives = 227/332 (68%), Gaps = 4/332 (1%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL +++AEL P +W+DP HA + RE SL + + A + + +++ +LA ++D
Sbjct: 5 RLQVVNAELEDPAVWNDPKHAQDLGREKKSLEDVVTTLTALRSGVADALELFELASADDD 64
Query: 171 TELELESLEALLTMRRKSKEK-ELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
+ LES+E+ ++ E E + S DP +C++++QAGAGGTE+ DWASM+L+
Sbjct: 65 -DATLESIESDADGFQQQLEGLEFRRMFSNPADPLNCFLDIQAGAGGTEAQDWASMLLRQ 123
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y +A+R+G++ +++E GE+AGIK ATIK++G+YAFGY + E GVHRLVR SPFDS
Sbjct: 124 YLKYAERKGFKAEVLEESEGEVAGIKSATIKLEGDYAFGYLRTETGVHRLVRKSPFDSSG 183
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RHTSFA+V V P D S + +N +DLR++ +R+ GAGGQH N TDSAVR+ H+PTGI
Sbjct: 184 GRHTSFASVFVYPEV-DDSFEIDVNPADLRVDTYRASGAGGQHINKTDSAVRLTHLPTGI 242
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHP 409
CQN+RSQH+N+A AM +L+S++ +LE+ + + S TD+ WG+QIR+YVL
Sbjct: 243 VVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMAEQQKLEDSKTDVGWGHQIRSYVLDQ 302
Query: 410 YRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
R +KDLRTN E+S+ VL+GDLD FI + L
Sbjct: 303 SR-IKDLRTNVEISNTQKVLDGDLDTFIQASL 333
>gi|424894608|ref|ZP_18318182.1| peptide chain release factor 2 [Rhizobium leguminosarum bv.
trifolii WSM2297]
gi|393178835|gb|EJC78874.1| peptide chain release factor 2 [Rhizobium leguminosarum bv.
trifolii WSM2297]
Length = 376
Score = 314 bits (804), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 163/349 (46%), Positives = 237/349 (67%), Gaps = 1/349 (0%)
Query: 94 QSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQ 153
Q+I ++++ L W RL+ L+ + PNLW+D A ++ RE L + VK EQ
Sbjct: 14 QAITLLRRHLDWDQAIRRLDWLNNKAEDPNLWNDATEAQKLMRERQQLDDGISGVKQLEQ 73
Query: 154 ELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAG 213
+L ++I++I+L EE D + E+ + L ++ ++ ++++A+LSGE D Y+EV +G
Sbjct: 74 QLNDNIELIELGEEEGDEGVVKEAEDTLKALKAEAARRQVEAMLSGEADGNDTYLEVHSG 133
Query: 214 AGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAE 273
AGGTES DWA+M+L+MY WA+R+ ++V L++ GE AGIK AT+ V G A+G+ K E
Sbjct: 134 AGGTESQDWANMLLRMYTRWAERQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWLKTE 193
Query: 274 VGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHA 333
GVHRLVRISP+DS RRHTSF+++ V P D S ++INE D RI+ +RS GAGGQH
Sbjct: 194 SGVHRLVRISPYDSNARRHTSFSSIWVYP-VVDDSIQIEINEGDCRIDTYRSSGAGGQHV 252
Query: 334 NTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSL 393
NTTDSAVRI HIPTGI CQ ERSQH+N+A A +L++R+ + E+ ++ + S
Sbjct: 253 NTTDSAVRITHIPTGIVVQCQQERSQHKNRAKAWDMLRARMYEAELKKREDAASAEAASK 312
Query: 394 TDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
TDI WG+QIR+YVL PY++VKDLRT + PD VL+G+L+ F+ + L+
Sbjct: 313 TDIGWGHQIRSYVLQPYQLVKDLRTGVASTAPDDVLDGELNEFMEAALA 361
>gi|367477693|ref|ZP_09477040.1| Peptide chain release factor 2 (RF-2) [Bradyrhizobium sp. ORS 285]
gi|365270143|emb|CCD89508.1| Peptide chain release factor 2 (RF-2) [Bradyrhizobium sp. ORS 285]
Length = 323
Score = 314 bits (804), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 153/307 (49%), Positives = 212/307 (69%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
+E SL + + E+EL ++I+MI+L END + E+ AL ++++ +EL+A
Sbjct: 2 QERTSLEDSLTGIGKVERELNDNIEMIELGEAENDAGVVTEAENALKDLKKEVARRELEA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+EV AGAGGTES DWASM+L+MY WA+ G++V ++E GE AGIK
Sbjct: 62 LLSGEADKFDTYLEVHAGAGGTESQDWASMLLRMYTRWAETHGFKVEFLEESLGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI++ G A+G+ K E GVHRLVRISPFDS RRHTSF++V + P D S + I E
Sbjct: 122 SATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVI-DDSIKIDIKE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD+R++ RSGGAGGQH N T+SAVR+ HIPTG+ CQ RSQH+N+A A +L++R+
Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
++E+ ++ + A + T+I WG+QIR+YVL PY+MVKDLRT + SD VL GDLD
Sbjct: 241 EIELKKREEKAAADQAAKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLNGDLDE 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMAATLA 307
>gi|254491393|ref|ZP_05104572.1| peptide chain release factor 2 [Methylophaga thiooxidans DMS010]
gi|224462871|gb|EEF79141.1| peptide chain release factor 2 [Methylophaga thiooxydans DMS010]
Length = 348
Score = 314 bits (804), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 157/332 (47%), Positives = 224/332 (67%), Gaps = 4/332 (1%)
Query: 115 LSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELE 174
++ EL P++WDDP A ++ +E SL + + + L + D+++LA EEND E
Sbjct: 20 VTRELESPSVWDDPDRAQKLGQERASLEKIVTTLSSHRDTLEDAKDLLELAVEENDQET- 78
Query: 175 LESLEALLTMRRKSKEK-ELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSW 233
+++ A L K EK E + SG+LD S YI++Q+G+GGTE+ DWA+++L+MY W
Sbjct: 79 FDAITADLDELEKGLEKLEFQRMFSGKLDKNSAYIDIQSGSGGTEAQDWANILLRMYLRW 138
Query: 234 AQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHT 293
+ + Y+V LM+ GE+AGIK ATI+++GEYAFG + E GVHRLVR SPFDSG RRHT
Sbjct: 139 GESQDYKVELMEVSAGEVAGIKSATIRMEGEYAFGMLRTETGVHRLVRKSPFDSGARRHT 198
Query: 294 SFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATC 353
SFA++ V P D + + IN +DLR++ +R+ GAGGQH NTTDSA+RI H PT I C
Sbjct: 199 SFASIFVYPEV-DDTIEIDINPADLRVDTYRASGAGGQHVNTTDSAIRITHEPTNIVVQC 257
Query: 354 QNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMV 413
QNERSQH+NK AM L++++ +LE+ +Q ++ +S +DI WG+QIR+YVL R +
Sbjct: 258 QNERSQHKNKDQAMNQLRAKLYELELQKQNEVKQAAEESKSDIGWGSQIRSYVLDQSR-I 316
Query: 414 KDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
KDLRT E + +VL+GDLD FI + L + L
Sbjct: 317 KDLRTGVETGNTQAVLDGDLDQFIEASLKSGL 348
>gi|150396182|ref|YP_001326649.1| peptide chain release factor 2 [Sinorhizobium medicae WSM419]
gi|150027697|gb|ABR59814.1| peptide chain release factor 2 [Sinorhizobium medicae WSM419]
Length = 342
Score = 313 bits (803), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 160/321 (49%), Positives = 225/321 (70%), Gaps = 1/321 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
P+LW+D A ++ RE L + ++ FEQ+L ++I++I+L EE D+ + E+ EAL
Sbjct: 8 PSLWNDAAEAQKLMRERQQLDDGISGLRRFEQQLNDNIELIELGEEEGDSAIVSEAEEAL 67
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
+R + +K+++A+LSGE D Y+EV +GAGGTES DWA+M+L+MY WA+R+GY+V
Sbjct: 68 RQLRNDAAKKQVEAMLSGEADQNDTYVEVHSGAGGTESQDWANMLLRMYTRWAERQGYKV 127
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
LM+ GE AGIK AT+ V G A+G+ K E GVHRLVRISP+DS RRHTSF+++ V
Sbjct: 128 ELMEIQDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFSSIWVY 187
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D S V INESD RI+ +RS GAGGQH NTTDSAVRI H+P+GI CQ ERSQH+
Sbjct: 188 PVV-DESIQVDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHMPSGIVVQCQQERSQHK 246
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
N+A A +L++R+ + E+ ++ + S T+I WG+QIR+YVL PY++VKDLRT E
Sbjct: 247 NRAKAWDMLRARLYEAELKKREEAANAEAASKTEIGWGHQIRSYVLQPYQLVKDLRTGVE 306
Query: 422 VSDPDSVLEGDLDGFILSYLS 442
+ P VL+G+L F+ + L+
Sbjct: 307 STSPGDVLDGELSEFMEAALA 327
>gi|398377942|ref|ZP_10536111.1| peptide chain release factor 2 [Rhizobium sp. AP16]
gi|397725869|gb|EJK86313.1| peptide chain release factor 2 [Rhizobium sp. AP16]
Length = 342
Score = 313 bits (803), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 156/321 (48%), Positives = 224/321 (69%), Gaps = 1/321 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
PNLW+D A ++ RE L + V+A EQ++ +++++I+L EE D ++ E+ EAL
Sbjct: 8 PNLWNDATEAQKLMRERQQLDDGISGVRALEQQVADNVELIELGEEEGDADVVREAEEAL 67
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
++ ++ ++++A+LSGE D Y+EV +GAGGTES DWA+M+L+MY WA+R+ ++V
Sbjct: 68 KALKTEAARRQVEAMLSGEADSNDTYVEVHSGAGGTESQDWANMLLRMYTRWAERQRFKV 127
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
L++ GE AGIK AT+ V G A+G+ K E GVHRLVRISP+DS RRHTSF+++ +
Sbjct: 128 ELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFSSIWIY 187
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D S + INE D RI+ +RS GAGGQH NTTDSAVRI HIPTGI CQ ERSQH+
Sbjct: 188 P-VVDDSIQIDINEGDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQCQQERSQHK 246
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
N+A A +L++R+ + E+ ++ + S TDI WG+QIR+YVL PY++VKDLRT
Sbjct: 247 NRAKAWDMLRARMYEAELMKREEAANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVT 306
Query: 422 VSDPDSVLEGDLDGFILSYLS 442
+ PD VL+GDL+ F+ + L+
Sbjct: 307 STAPDDVLDGDLNEFMEAALA 327
>gi|157363562|ref|YP_001470329.1| peptide chain release factor 2 [Thermotoga lettingae TMO]
gi|166977374|sp|A8F531.1|RF2_THELT RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|157314166|gb|ABV33265.1| peptide chain release factor 2 [Thermotoga lettingae TMO]
Length = 367
Score = 313 bits (803), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 158/331 (47%), Positives = 225/331 (67%), Gaps = 5/331 (1%)
Query: 108 LNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDM-IKLAR 166
LN+ L + +E++ P +W D AG IS++ + + ++ E+ E ID+ I+L+
Sbjct: 29 LNMELKKMESEMSDPEIWKDQRKAGEISKKVRRIKELLSDISEIERNF-EDIDVGIELSE 87
Query: 167 EENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMV 226
E+ ++E + + + + + +L+ +L+ LD + Y+ + GAGGTES DWA M+
Sbjct: 88 EDPGIAQDIEKI--VQEVEKNIRRFQLELILNDPLDQNNAYLSIHPGAGGTESHDWAQML 145
Query: 227 LQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFD 286
L+MY WA+R+G+ V L+D PGE AG+K ATI V GEYA+GY K E GVHRLVRISPFD
Sbjct: 146 LRMYMRWAERKGFIVELLDFQPGEEAGLKSATILVKGEYAYGYLKHERGVHRLVRISPFD 205
Query: 287 SGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIP 346
+ KRRHTSFA+V V+P D V+I D+RI+ FR+ G GGQ+ N TDSAVRI H+P
Sbjct: 206 AAKRRHTSFASVNVVPEISDD-IDVEIKPEDIRIDTFRASGHGGQYVNRTDSAVRITHLP 264
Query: 347 TGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYV 406
TGI +CQ+ERSQHQNKA AM VL++++ QLE+A++ + E L +ISWGNQIR+Y+
Sbjct: 265 TGIVVSCQSERSQHQNKALAMKVLKAKLYQLELAKRREQLDEIQGELKEISWGNQIRSYI 324
Query: 407 LHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
L PY +VKD RT+ E + D+VL+G+LD FI
Sbjct: 325 LQPYTLVKDHRTDIETGNFDAVLDGELDQFI 355
>gi|237745578|ref|ZP_04576058.1| peptide chain release factor 2 [Oxalobacter formigenes HOxBLS]
gi|229376929|gb|EEO27020.1| peptide chain release factor 2 [Oxalobacter formigenes HOxBLS]
Length = 349
Score = 313 bits (803), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 153/332 (46%), Positives = 227/332 (68%), Gaps = 4/332 (1%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
+L ++AEL P +W+DP A + RE SL + + + L + ++ ++A+EE D
Sbjct: 17 KLEQVNAELEDPAVWNDPKKAQELGREKKSLENVVLSLSHIKSALTDAGELFEMAKEEQD 76
Query: 171 TELELESLEALLTMRRKSKEK-ELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
E L+++EA ++ + EK E + S +DPC+C++++QAGAGGTE+ DWASM+L+
Sbjct: 77 DET-LKAVEADVSELQDRIEKLEFRRMFSNPMDPCNCFVDIQAGAGGTEAQDWASMILRQ 135
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y + +R+G+ T++++ GEIAGIK ATIKV+G+YA+GY + E GVHRLVR SPFDS
Sbjct: 136 YLRYCERKGFNATILEQSDGEIAGIKTATIKVEGDYAYGYLRTETGVHRLVRKSPFDSAN 195
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RHTSF ++ V P D S + IN +D+R++ +R+ GAGGQH N TDSAVR+ HIPTGI
Sbjct: 196 GRHTSFCSLFVYPEV-DDSIEIDINPADVRVDTYRASGAGGQHINKTDSAVRLTHIPTGI 254
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHP 409
CQN+RSQH+N+A A +L+SR+ +LE+ ++ + S TD+ WG+QIR+YVL
Sbjct: 255 VVQCQNDRSQHRNRADAWEMLKSRLYELELRKRMAEQQKLEDSKTDVGWGHQIRSYVLDS 314
Query: 410 YRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
R +KDLRT++E + +VL+GDLD FI+ L
Sbjct: 315 SR-IKDLRTSHETGNTKAVLDGDLDDFIIESL 345
>gi|456355221|dbj|BAM89666.1| peptide chain release factor 2 [Agromonas oligotrophica S58]
Length = 323
Score = 313 bits (803), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 151/307 (49%), Positives = 214/307 (69%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
+E SL + + E+EL ++I+MI+L END+ + E+ AL ++++ +EL+A
Sbjct: 2 QERTSLEDSLTGIGKVERELSDNIEMIELGEAENDSGVVTEAEHALKELKKEVARRELEA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+EV AGAGGTES DWA M+L+MY WA++ G+++ ++E GE AGIK
Sbjct: 62 LLSGEADKFDTYLEVHAGAGGTESQDWAQMLLRMYARWAEKHGFKIEYLEESLGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI++ G A+G+ K E GVHRLVRISPFDS RRHTSF++V + P D S + I E
Sbjct: 122 SATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVI-DDSIKIDIKE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD+R++ RSGGAGGQH N T+SAVR+ HIPTG+ CQ RSQH+N+A A +L++R+
Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
++E+ ++ + A + T+I WG+QIR+YVL PY+MVKDLRT + SD VL+GDLD
Sbjct: 241 EIELKKREEKAAADQAAKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLDGDLDE 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMAATLA 307
>gi|377821217|ref|YP_004977588.1| peptide chain release factor 2 [Burkholderia sp. YI23]
gi|357936052|gb|AET89611.1| peptide chain release factor 2 [Burkholderia sp. YI23]
Length = 406
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 160/370 (43%), Positives = 239/370 (64%), Gaps = 8/370 (2%)
Query: 74 QW--TILDESEGDWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHA 131
QW + S+ W + AAA A + + + RL ++ EL PN+W+D +A
Sbjct: 39 QWKRNVSTRSKAFWPTCAAARASYGGI----FDYDAKSARLVEVNKELEDPNVWNDSKNA 94
Query: 132 GRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEK 191
+ RE L G + + A + +L + ++ ++AREE+D + + S +R + ++
Sbjct: 95 QALGREKKLLDGVVSALTALDNDLRDANELFEMAREEDDEDTLVASESDADALRLRVEDM 154
Query: 192 ELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEI 251
E + S DP SC+I++QAGAGGTE+ DWASM+L+ Y + +R+G++ +++E G++
Sbjct: 155 EFRRMFSNPADPNSCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKTEVLEESEGDV 214
Query: 252 AGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHV 311
AGIK ATIKV+GEYA+GY + E G+HRLVR SPFDS RHTSF++V V P D S +
Sbjct: 215 AGIKSATIKVEGEYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEI-DDSIEI 273
Query: 312 QINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQ 371
+IN +D+R + +R+ GAGGQH N TDSAVR+ H PTGI CQN+RSQH+N+A AM +L+
Sbjct: 274 EINPADIRTDTYRASGAGGQHINKTDSAVRLTHAPTGIVVQCQNDRSQHRNRAEAMQMLK 333
Query: 372 SRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEG 431
+R+ + E+ ++ + S TD+ WG+QIR+YVL R VKDLRTN E+S+ +VL+G
Sbjct: 334 ARLYEFEMRKRQAEQDKLESSKTDVGWGHQIRSYVLDQSR-VKDLRTNVEMSNTRAVLDG 392
Query: 432 DLDGFILSYL 441
DLD FI + L
Sbjct: 393 DLDDFISASL 402
>gi|93005664|ref|YP_580101.1| peptide chain release factor 2 [Psychrobacter cryohalolentis K5]
gi|92393342|gb|ABE74617.1| bacterial peptide chain release factor 2 (bRF-2) [Psychrobacter
cryohalolentis K5]
Length = 349
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 156/335 (46%), Positives = 221/335 (65%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++ EL P LW+DP A +I++E L G + V + E L + M++LA E D
Sbjct: 17 RLEEVNLELENPELWNDPERATKINKEKSQLDGVIDVVVSLETTLEDASAMLELAVEAED 76
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
L + L ++ + E + SGE+DP +CY+++Q+G+GGTE+ DWA M+L+MY
Sbjct: 77 ESLLADVQAELDNAEKRVADLEFRRMFSGEMDPNNCYLDIQSGSGGTEAQDWAEMLLRMY 136
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA+ G++V +++ G +AGIK ATI++ G YAFG+ + E+GVHRLVR SPFDS
Sbjct: 137 TRWAEAHGFKVEVIEVSSGSVAGIKSATIEIKGNYAFGWLRTEIGVHRLVRKSPFDSNNG 196
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSFAAV V P D + + IN +DLRI+ +RS GAGGQH NTTDSAVRI H P+G+
Sbjct: 197 RHTSFAAVFVSPEI-DDNIEIDINPADLRIDTYRSSGAGGQHVNTTDSAVRITHEPSGVV 255
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
TCQNERSQH NKA+AM +L++++ +LE+ ++ + +D+ WG+QIR+YVL
Sbjct: 256 VTCQNERSQHGNKATAMKMLRAKLYELEMQKRMESQQAVEDGKSDVGWGSQIRSYVLDDS 315
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E + +VL+GDLD FI + L A L
Sbjct: 316 R-IKDLRTGVETFNTGAVLDGDLDQFIEASLKAGL 349
>gi|146340475|ref|YP_001205523.1| peptide chain release factor 2 [Bradyrhizobium sp. ORS 278]
gi|146193281|emb|CAL77297.1| Peptide chain release factor 2 (RF-2) [Bradyrhizobium sp. ORS 278]
Length = 323
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 153/307 (49%), Positives = 212/307 (69%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
+E SL + + E+EL ++I+MI+L END + E+ AL ++++ +EL+A
Sbjct: 2 QERTSLEDSLTGIGKVERELSDNIEMIELGEAENDAGVVAEAENALKELKKEVARRELEA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+EV AGAGGTES DWASM+L+MY WA+ G++V ++E GE AGIK
Sbjct: 62 LLSGEADKFDTYLEVHAGAGGTESQDWASMLLRMYTRWAETHGFKVEYLEESLGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI++ G A+G+ K E GVHRLVRISPFDS RRHTSF++V + P D S + I E
Sbjct: 122 SATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVI-DDSIKIDIKE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD+R++ RSGGAGGQH N T+SAVR+ HIPTG+ CQ RSQH+N+A A +L++R+
Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
++E+ ++ + A + T+I WG+QIR+YVL PY+MVKDLRT + SD VL GDLD
Sbjct: 241 EIELKKREEKAAADQAAKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLNGDLDE 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMAATLA 307
>gi|348678026|gb|EGZ17843.1| hypothetical protein PHYSODRAFT_501483 [Phytophthora sojae]
Length = 451
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 169/403 (41%), Positives = 246/403 (61%), Gaps = 14/403 (3%)
Query: 40 EVLLFPRGCRWFSTQAAVEPSTSDGLTVDGIVASQWTILDESEGDWKSHAAAIAQS---I 96
EV + RG +FS ++ STS V ++W E+ +S + Q+ I
Sbjct: 41 EVWVPSRG--YFSLYGPLKLSTS-------AVPARWFSSPEAPTSGESFTSLANQAKREI 91
Query: 97 QVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELL 156
+VI + L L E P+LWDD A + + G+L + + + L
Sbjct: 92 EVIHDVVATAENKQELAELREEAAAPDLWDDATRAASVVQRLGALESRETRAEELHRRFL 151
Query: 157 EHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGG 216
+ ++ +A EE D + E + A+ + +++ L+ LLS E D SC++E+QAGAGG
Sbjct: 152 DTKELHLMAMEEEDEPMLRECVNAMAAVHADAQQLRLELLLSHESDARSCFLEIQAGAGG 211
Query: 217 TESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGV 276
T+S DW +M+ +MY W + RG++V +DE GE AG + +++DG YA+G+AK+E GV
Sbjct: 212 TDSCDWTAMLARMYARWGEARGFQVQNVDESVGEEAGFRSVVLRLDGAYAYGWAKSEAGV 271
Query: 277 HRLVRISPFDSGKRRHTSFAAVAVIPNS--GDSSTHVQINESDLRIERFRSGGAGGQHAN 334
HRLVRISPFDS RRHTSFA V V P + G SS ++I+ DLRI+ FRS GAGGQH N
Sbjct: 272 HRLVRISPFDSAGRRHTSFAQVRVYPMAAEGRSSEEIEISTKDLRIDTFRSSGAGGQHVN 331
Query: 335 TTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLT 394
TTDSA+RI H+PTGI Q+ERSQH+NKA A+ VL++++ Q ++ +A+ + Q L
Sbjct: 332 TTDSAIRITHLPTGIVVQSQSERSQHRNKAEALAVLRAKLYQRKLDEEARKKQQFAQGLG 391
Query: 395 DISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
+ +WGNQIR+YVL+PY++VKD RTNY + VL+GD+D FI
Sbjct: 392 ENAWGNQIRSYVLYPYQLVKDHRTNYSEGNTAQVLDGDIDHFI 434
>gi|373450066|ref|ZP_09542138.1| Peptide chain release factor 2 (RF-2) [Wolbachia pipientis wAlbB]
gi|371932728|emb|CCE77126.1| Peptide chain release factor 2 (RF-2) [Wolbachia pipientis wAlbB]
Length = 337
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 152/335 (45%), Positives = 225/335 (67%), Gaps = 2/335 (0%)
Query: 108 LNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLARE 167
+ +RL L ++ + NLW D A I +E + ++ E + + I ++K A +
Sbjct: 1 MKLRLEELDSQASNDNLWQDNQKAQEILKERSKIKHDIESFSKLESDYNDAISLMKSAID 60
Query: 168 ENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVL 227
END E E L+ + + K KE ++L +GE D +C++E+ +GAGGTES DWA M++
Sbjct: 61 ENDEEFFSEVKGELVKLEKLIKLKETESLFTGEADNNNCFLEIHSGAGGTESNDWAEMLM 120
Query: 228 QMYKSWAQ-RRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFD 286
+MY WA+ ++V +++++ G+ GIK TIK+ GE A+G+AK+E GVHRLVRISPFD
Sbjct: 121 RMYTRWAEIYHNFKVEVVEKLDGDAVGIKSTTIKIIGEKAYGWAKSESGVHRLVRISPFD 180
Query: 287 SGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIP 346
+ +RHTSFA+V V P DS + ++E DL+I+ +R+ GAGGQH N T+SAVRI HIP
Sbjct: 181 ANGKRHTSFASVGVTPVIEDS-IDIVVDEKDLKIDTYRASGAGGQHVNKTESAVRITHIP 239
Query: 347 TGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYV 406
TG+ A CQN RSQH+NK A+ +L+ R+ Q+E+ ++ Q AE DI WG+QIR+YV
Sbjct: 240 TGVVAQCQNGRSQHKNKDEALKLLKGRLYQIELEKKEQKMAEEYGKKCDIGWGSQIRSYV 299
Query: 407 LHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
+HPY+MVKDLRT +EV + +SV +G++D FI+S L
Sbjct: 300 MHPYQMVKDLRTGHEVGNINSVFDGNIDCFIVSVL 334
>gi|390168791|ref|ZP_10220744.1| peptide chain release factor 2 [Sphingobium indicum B90A]
gi|389588579|gb|EIM66621.1| peptide chain release factor 2 [Sphingobium indicum B90A]
Length = 321
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 149/307 (48%), Positives = 214/307 (69%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + +A + E + ++I++A E D ++ E++ +L + ++ E ++ A
Sbjct: 2 RERTRLDAAIGATRAIDSEKTDTAELIEMAEAEGDEDMVNEAIASLKALADRADEDKIKA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LL+GE D Y+E+ AGAGGTES DWA M+ +MY+ WA+RRGY+V L+D G+ AGIK
Sbjct: 62 LLAGEADASDTYLEIHAGAGGTESQDWAEMLSRMYRRWAERRGYKVELVDYQAGDQAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
AT GE A+GYAK E GVHRLVRISP+DS RRHTSF++V V P D + +++NE
Sbjct: 122 SATFLFKGENAYGYAKTESGVHRLVRISPYDSSARRHTSFSSVWVYPVI-DDNIEIEVNE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SDL+I+ +R+ GAGGQH NTTDSAVRI H+P+GI QN+RSQH+N+A+AM +L++R+
Sbjct: 181 SDLKIDTYRASGAGGQHVNTTDSAVRITHVPSGIIVASQNDRSQHKNRATAMNMLKARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ R+ + + Q+ T+I WG+QIR+YVL PY++VKDLRT + PD VL+G LD
Sbjct: 241 EAELRRREEAASGEYQAKTEIGWGHQIRSYVLQPYQLVKDLRTGVTSTSPDDVLDGALDP 300
Query: 436 FILSYLS 442
F+ + LS
Sbjct: 301 FMAAALS 307
>gi|88658024|ref|YP_507510.1| peptide chain release factor 2, programmed frameshift, partial
[Ehrlichia chaffeensis str. Arkansas]
gi|88599481|gb|ABD44950.1| peptide chain release factor 2, programmed frameshift [Ehrlichia
chaffeensis str. Arkansas]
Length = 366
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 157/358 (43%), Positives = 236/358 (65%), Gaps = 5/358 (1%)
Query: 90 AAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVK 149
++ +++Q+I+ L NL L LS + + +LWDD A RI E + +
Sbjct: 12 VSLGKALQLIRGHLDIDNLTSLLADLSLQCSSTSLWDDNSLAQRILCERARISKTLNSFT 71
Query: 150 AFEQELLEHIDMIKLAREENDTELELESLEA-LLTMRRKSKEKELDALLSGELDPCSCYI 208
E+E + +++ + NDT+ L LEA L ++ K ++KE++ L S E D C+I
Sbjct: 72 ELEEEYNYYTELLSVIN--NDTDELLNELEAGLAKLKEKVQKKEVECLFSNEADHNDCFI 129
Query: 209 EVQAGAGGTESMDWASMVLQMYKSWAQ-RRGYRVTLMDEMPGEIAGIKRATIKVDGEYAF 267
E+Q+GAGGTES DW+SM+ +MY WA+ ++ ++ ++ GE G+K ATIKV G+ A+
Sbjct: 130 EIQSGAGGTESNDWSSMLFRMYVRWAEIYHNFKTEIVHKLDGEEVGVKSATIKVIGDNAY 189
Query: 268 GYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGG 327
G+AK E G+HRLVRISPF+S +RHT+F+++ V P + T+++I + DLRI+ +R+ G
Sbjct: 190 GWAKTESGIHRLVRISPFNSNAKRHTTFSSILVSP-VINEDTNIEILDKDLRIDTYRASG 248
Query: 328 AGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNA 387
AGGQH N T+SAVRI HIP+GI CQN RSQHQN A A +L+SR+ QL++ + + A
Sbjct: 249 AGGQHVNKTESAVRITHIPSGIVVQCQNNRSQHQNLAEAHNLLKSRLYQLKLQEKEKKMA 308
Query: 388 EHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
E +I WGNQIR+YV+HPY+MVKD+RT +EV + +SVL+G+LD FI+S L+ +
Sbjct: 309 EEHNKRCNIGWGNQIRSYVMHPYQMVKDIRTGHEVGNVNSVLDGNLDSFIISALTTKI 366
>gi|148255578|ref|YP_001240163.1| peptide chain release factor 2 [Bradyrhizobium sp. BTAi1]
gi|146407751|gb|ABQ36257.1| bacterial peptide chain release factor 2 (bRF-2) [Bradyrhizobium
sp. BTAi1]
Length = 323
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 151/307 (49%), Positives = 212/307 (69%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
+E SL + + E++L ++I+MI+L END + E+ AL +++ +EL+A
Sbjct: 2 QERTSLEDSLTGIGKVERDLSDNIEMIELGEAENDAGVVTEAENALKALKKDVARRELEA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+EV AGAGGTES DWA M+L+MY WA++ G+++ ++E GE AGIK
Sbjct: 62 LLSGEADKFDTYLEVHAGAGGTESQDWAQMLLRMYTRWAEKHGFKIEYLEETQGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI++ G A+G+ K E GVHRLVRISPFDS RRHTSF++VA+ P D S + I E
Sbjct: 122 SATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVAIFPVV-DDSIKIDIKE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD+R + RSGGAGGQH N T+SAVR+ HIPTG+ CQ RSQH+N+A A +L++R+
Sbjct: 181 SDVRTDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
++E+ ++ + A + T+I WG+QIR+YVL PY+MVKDLRT + SD VL+GDLD
Sbjct: 241 EIELKKREEKAAADQAAKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDE 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMAATLA 307
>gi|395491948|ref|ZP_10423527.1| peptide chain release factor 2 [Sphingomonas sp. PAMC 26617]
Length = 321
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 163/307 (53%), Positives = 208/307 (67%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + +A E EL + ++I++A E DTE+E E + AL + R++ ++ A
Sbjct: 2 RERRRLDEAITATRAIESELNDTAELIEMAEAEGDTEMESEGVAALADLARRADTDKVKA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LL+GE D YIEV AGAGGTES DWA M+ +MY W +R G +V L+D+ GE AGIK
Sbjct: 62 LLAGEADGNDTYIEVNAGAGGTESQDWAGMLSRMYSRWGERHGLKVELIDQHSGEQAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
AT+ + GE A+GYAK E GVHRLVRISP+DS RRHTSFA+V V P D + V+ NE
Sbjct: 122 SATLLLKGENAYGYAKTESGVHRLVRISPYDSAARRHTSFASVWVYPVV-DDNIEVEYNE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SDLRI+ +R+ GAGGQH NTTDSAVRI HIPTGI CQN+RSQH+NKA A L++R+
Sbjct: 181 SDLRIDTYRASGAGGQHINTTDSAVRITHIPTGIVVQCQNQRSQHKNKAEAYNQLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+A + TDI WG+QIR+YVL PY+MVKDLRT S P VL+GDLD
Sbjct: 241 ERELAIREAAANAENAGKTDIGWGHQIRSYVLQPYQMVKDLRTGVTSSSPSDVLDGDLDA 300
Query: 436 FILSYLS 442
F+ + LS
Sbjct: 301 FMAAALS 307
>gi|365886879|ref|ZP_09425776.1| Peptide chain release factor 2 (RF-2) [Bradyrhizobium sp. STM 3809]
gi|365337572|emb|CCD98307.1| Peptide chain release factor 2 (RF-2) [Bradyrhizobium sp. STM 3809]
Length = 323
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 153/307 (49%), Positives = 212/307 (69%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
+E SL + + E+EL ++I+MI+L END + E+ AL ++++ +EL+A
Sbjct: 2 QERTSLEDSLTGIGKVERELSDNIEMIELGEAENDAGVVTEAENALKDLKKEVARRELEA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+EV AGAGGTES DWASM+L+MY WA+ G++V ++E GE AGIK
Sbjct: 62 LLSGEADKFDTYLEVHAGAGGTESQDWASMLLRMYTRWAETHGFKVEYLEESLGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI++ G A+G+ K E GVHRLVRISPFDS RRHTSF++V + P D S + I E
Sbjct: 122 SATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVI-DDSIKIDIKE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD+R++ RSGGAGGQH N T+SAVR+ HIPTG+ CQ RSQH+N+A A +L++R+
Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
++E+ ++ + A + T+I WG+QIR+YVL PY+MVKDLRT + SD VL GDLD
Sbjct: 241 EIELKKREEKAAADQAAKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLNGDLDE 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMAATLA 307
>gi|308198348|ref|YP_003933612.1| peptide chain release factor 1 [Pseudomonas aeruginosa PAO1]
gi|307752087|gb|ADN93061.1| peptide chain release factor I [Pseudomonas aeruginosa PAO1]
Length = 364
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 159/354 (44%), Positives = 230/354 (64%), Gaps = 6/354 (1%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
+++ Q I+ L + + RL ++ EL PN+W++P +A + RE L ++ +
Sbjct: 13 LSERTQTIRGYLDYDQKHDRLVEVNRELEDPNVWNNPEYAQNLGRERAQLAQVVETLDDL 72
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
L + D++ +A EE+D + + +R ++ E + SGE+DP + Y+++Q
Sbjct: 73 TSGLADSRDLLDMAVEEDDEGAVDDVANEVERLREILEKLEFRRMFSGEMDPNNAYLDIQ 132
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AG+GGTE+ DWA+M+L+MY WA + G+ T+++ GE+AGIK AT+ + GEYAFG+ +
Sbjct: 133 AGSGGTEAQDWANMLLRMYLRWADKHGFDATIIELSEGEVAGIKGATVHIKGEYAFGWLR 192
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
E+GVHRLVR SPFDSG RRHTSF AV V P D + ++IN +DLRI+ +RS GAGGQ
Sbjct: 193 TEIGVHRLVRKSPFDSGNRRHTSFTAVFVSPEI-DDNIEIEINPADLRIDTYRSSGAGGQ 251
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQ 391
H NTTDSAVRI H+PT CQNERSQH NK +AM +L++++ +LE+ ++ +
Sbjct: 252 HVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQKRTAASQALED 311
Query: 392 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
S +DI WG+QIR+YVL R +KDLRT E SD D VL+GDLD YL ASL
Sbjct: 312 SKSDIGWGHQIRSYVLDQSR-IKDLRTGIERSDCDKVLDGDLD----EYLEASL 360
>gi|227821685|ref|YP_002825655.1| peptide chain release factor 2 [Sinorhizobium fredii NGR234]
gi|227340684|gb|ACP24902.1| peptide chain release factor 2 protein [Sinorhizobium fredii
NGR234]
Length = 342
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 159/321 (49%), Positives = 224/321 (69%), Gaps = 1/321 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
P LW+D A ++ RE L + ++ FEQ+L ++I++I+L EE D+ + E+ EAL
Sbjct: 8 PTLWNDAGEAQKLMRERQQLDDSITGLRRFEQQLSDNIELIELGEEEGDSAIVTEAEEAL 67
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
+R ++ +K+++A+LSGE D Y+EV +GAGGTES DWA+M+L+MY WA+R+GY+V
Sbjct: 68 RQLRNEASKKQVEAMLSGEADQNDTYLEVHSGAGGTESQDWANMLLRMYSRWAERQGYKV 127
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
LM+ GE AGIK AT+ V G A+G+ K E GVHRLVRISP+DS RRHTSF+++ V
Sbjct: 128 ELMEIQDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFSSIWVY 187
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D S + INE D RI+ +RS GAGGQH NTTDSAVRI H+P+GI CQ ERSQH+
Sbjct: 188 PVV-DDSIQIDINEGDCRIDTYRSSGAGGQHVNTTDSAVRITHMPSGIVVQCQQERSQHK 246
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
N+A A +L++R+ + E+ ++ S TDI WG+QIR+YVL PY++VKDLRT E
Sbjct: 247 NRAKAWDMLRARLYEAELKKREDAANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVE 306
Query: 422 VSDPDSVLEGDLDGFILSYLS 442
+ P VL+G+L+ F+ + L+
Sbjct: 307 STSPGDVLDGELNEFMEAALA 327
>gi|404492859|ref|YP_006716965.1| peptide chain release factor 2 [Pelobacter carbinolicus DSM 2380]
gi|404397961|gb|ABA88496.2| peptide chain release factor 2 [Pelobacter carbinolicus DSM 2380]
Length = 364
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 157/332 (47%), Positives = 222/332 (66%), Gaps = 3/332 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
R+ L AE+++P W+ A I +E L + + +QEL E + ++ E+
Sbjct: 31 RVAELEAEMSRPGFWESGDQAQDILKERTGLEKLVTSFRESQQEL-EDLQLLADLGAESG 89
Query: 171 TELELESLEALLT-MRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
E LE + ALL ++R+ + E +LSGE D C + AGAGGTE+ DWA M+L+M
Sbjct: 90 DEATLEEISALLPDLQRRVDKMEFARMLSGEHDSCDAIFSINAGAGGTEAQDWADMLLRM 149
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y + +++G++ L D PG+ AGIK AT+ V G+YA+G+ +AE+G+HRLVRISPFDS
Sbjct: 150 YMRYFEKKGFKAELTDHQPGDEAGIKGATLTVSGDYAYGWLRAEIGIHRLVRISPFDSNA 209
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RRHTSF +V V P D V INE DL+++ +RS GAGGQH N TDSA+RI H+P+GI
Sbjct: 210 RRHTSFCSVFVFPELPDD-VEVDINEKDLKVDTYRSSGAGGQHVNKTDSAIRITHVPSGI 268
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHP 409
CQNERSQH+N+A+AM L++R+ +LE+ ++ + + +I WG+QIR+YVLHP
Sbjct: 269 VVACQNERSQHKNRATAMKQLKARLYELELRKKEEEASAIAGEKMEIGWGSQIRSYVLHP 328
Query: 410 YRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
YRMVKD RTN+E + D+VL+GDLDGFI +YL
Sbjct: 329 YRMVKDHRTNFESGNADAVLDGDLDGFIEAYL 360
>gi|357033071|ref|ZP_09095003.1| peptide chain release factor 2 [Gluconobacter morbifer G707]
gi|356413431|gb|EHH67086.1| peptide chain release factor 2 [Gluconobacter morbifer G707]
Length = 322
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 151/307 (49%), Positives = 217/307 (70%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L +++ V+ E ++ +++++LA E D L E++ L ++ ++ ++E+++
Sbjct: 2 RERTMLANQIEGVERIENDVQGTLELVELAEMEGDESLVNEAIGTLKSLAEETHKREIES 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D CY+EV AGAGGTE+ DWA M+L+MY WA++ GY+VT ++ GE AGIK
Sbjct: 62 LLSGEADSNDCYLEVNAGAGGTEAQDWAEMLLRMYTRWAEQHGYKVTFIESSEGEQAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI+V G A+G+ K E GVHRLVRISPFD+ RR TSFA+V V P D S V++N+
Sbjct: 122 SATIQVSGPNAYGWLKTEAGVHRLVRISPFDAAARRQTSFASVWVYPVV-DDSIEVEVND 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SDLR++ FR+ GAGGQH N TDSA+RI HIPTGI CQ +RSQH+N+A AM +L++R+
Sbjct: 181 SDLRVDTFRASGAGGQHVNKTDSAIRITHIPTGIVVACQTDRSQHRNRAKAMEMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ ++ A+ + TDI WG+QIR+YVL PY++VKDLRT E +PD+VL+G LD
Sbjct: 241 EAELQKREAAAAQTEAAKTDIGWGHQIRSYVLAPYQLVKDLRTGVEKGNPDAVLDGALDD 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMSASLA 307
>gi|58696790|ref|ZP_00372322.1| peptide chain release factor 2 [Wolbachia endosymbiont of
Drosophila simulans]
gi|58698424|ref|ZP_00373334.1| peptide chain release factor 2 [Wolbachia endosymbiont of
Drosophila ananassae]
gi|58698511|ref|ZP_00373415.1| peptide chain release factor 2 [Wolbachia endosymbiont of
Drosophila ananassae]
gi|225630212|ref|YP_002727003.1| Protein chain release factor B [Wolbachia sp. wRi]
gi|58534979|gb|EAL59074.1| peptide chain release factor 2 [Wolbachia endosymbiont of
Drosophila ananassae]
gi|58535047|gb|EAL59136.1| peptide chain release factor 2 [Wolbachia endosymbiont of
Drosophila ananassae]
gi|58537012|gb|EAL60158.1| peptide chain release factor 2 [Wolbachia endosymbiont of
Drosophila simulans]
gi|225592193|gb|ACN95212.1| Protein chain release factor B [Wolbachia sp. wRi]
Length = 336
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 152/334 (45%), Positives = 223/334 (66%), Gaps = 2/334 (0%)
Query: 110 VRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEN 169
+RL L ++ + NLW D A I +E + ++ E + + I ++K A +EN
Sbjct: 1 MRLEELDSQASNDNLWQDNQKAQEILKERSKIKNDVESFLKLESDYNDAISLMKSAIDEN 60
Query: 170 DTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
D E E L + + K KE ++L +GE D +C++E+ +GAGGTES DWA M+++M
Sbjct: 61 DEEFFSEVENELAKLEKLIKYKETESLFTGEADNNNCFLEIHSGAGGTESNDWAEMLMRM 120
Query: 230 YKSWAQ-RRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSG 288
Y WA+ ++V +++++ GE GIK A IK+ GE A+G+AK+E G+HRLVRISPFD+
Sbjct: 121 YVRWAEIYHNFKVEVVEKLEGESVGIKSAMIKIVGEKAYGWAKSESGIHRLVRISPFDAN 180
Query: 289 KRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTG 348
+RHTSFA+V V P DS + ++E DL+I+ +R+ GAGGQH N T+SAVRI HIPTG
Sbjct: 181 GKRHTSFASVGVTPVIEDS-IDIAVDEKDLKIDTYRASGAGGQHVNKTESAVRITHIPTG 239
Query: 349 ITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLH 408
+ CQN RSQH+NK A+ +L+ R+ Q+E+ ++ Q AE DI WGNQIR+YV+H
Sbjct: 240 VVVQCQNGRSQHRNKDEALKLLKGRLYQIELEKKEQKMAEEYGKKCDIGWGNQIRSYVMH 299
Query: 409 PYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
PY+MVKDLRT +EV + +SV +G++D FI+S L+
Sbjct: 300 PYQMVKDLRTGHEVGNINSVFDGNIDCFIVSVLT 333
>gi|381200564|ref|ZP_09907701.1| peptide chain release factor 2 [Sphingobium yanoikuyae XLDN2-5]
Length = 321
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 148/307 (48%), Positives = 214/307 (69%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + +A E E ++ ++I++A E D ++ E++ AL + ++ E ++ A
Sbjct: 2 RERTRLDSAIGATRAIEAEKTDNAELIEMAEAEGDEDMVSEAIAALKALAERADEDKIKA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LL+GE D Y+E+ AGAGGTES DWA ++ +MY+ WA+RRGY+V L+D GE AGIK
Sbjct: 62 LLAGEADASDTYLEIHAGAGGTESQDWAEILSRMYRRWAERRGYKVELVDYQAGETAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
AT + GE A+GYAK E GVHRLVRISP+DS RRHTSF++V V P D + +++ E
Sbjct: 122 SATFLIKGENAYGYAKTESGVHRLVRISPYDSAARRHTSFSSVWVYPVI-DDNIDIEVKE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SDL+I+ +R+ GAGGQH NTTDSAVRI H+P+GI QN+RSQH+N+A+AM +L++R+
Sbjct: 181 SDLKIDTYRASGAGGQHVNTTDSAVRITHVPSGIIVASQNDRSQHKNRATAMNMLKARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ ++ + + + T+I WG+QIR+YVL PY++VKDLRT + PD VL+G LD
Sbjct: 241 EAELRKREEAASTDYAAKTEIGWGHQIRSYVLQPYQLVKDLRTGVTSTAPDDVLDGALDP 300
Query: 436 FILSYLS 442
F+ + LS
Sbjct: 301 FMAAALS 307
>gi|170289031|ref|YP_001739269.1| peptide chain release factor 2 [Thermotoga sp. RQ2]
gi|281412649|ref|YP_003346728.1| peptide chain release factor 2 [Thermotoga naphthophila RKU-10]
gi|418045638|ref|ZP_12683733.1| peptide chain release factor 2 [Thermotoga maritima MSB8]
gi|238688848|sp|B1LB88.1|RF2_THESQ RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|170176534|gb|ACB09586.1| peptide chain release factor 2 [Thermotoga sp. RQ2]
gi|281373752|gb|ADA67314.1| peptide chain release factor 2 [Thermotoga naphthophila RKU-10]
gi|351676523|gb|EHA59676.1| peptide chain release factor 2 [Thermotoga maritima MSB8]
Length = 367
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 155/336 (46%), Positives = 223/336 (66%), Gaps = 7/336 (2%)
Query: 108 LNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLARE 167
+N L + +L P++WDD A RE+ + ++K + + + + +++A E
Sbjct: 29 INKELEEVEKKLTDPSVWDDQKKA----REYTQKLKRLKNISEDLKRVRSLFEDLEVAIE 84
Query: 168 --ENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASM 225
+ D E+ E + + K+ EL+ +L+G+ DP + Y+ V GAGGTES DWA M
Sbjct: 85 LSDEDQEMAQHVEEIVQELEGAVKKLELEIILNGKYDPNNAYLSVHPGAGGTESQDWAQM 144
Query: 226 VLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPF 285
+L+MY WA+R+G+ V +++ PGE AGIK ATI + GEYA+GY K E GVHRLVRISPF
Sbjct: 145 LLRMYMRWAERKGFDVEIVEFQPGEEAGIKDATILIKGEYAYGYLKHESGVHRLVRISPF 204
Query: 286 DSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHI 345
D+ +RRHTSFA+V VIP D ++I DL+IE FR+ G GGQ+ N T+SAVRI H+
Sbjct: 205 DAARRRHTSFASVNVIPEI-DDDVDIEIRPEDLKIETFRASGHGGQYVNKTESAVRITHL 263
Query: 346 PTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTY 405
PTGI +CQNERSQHQNK +A+ +L++++ QLE+ ++ + E L DISWGNQIR+Y
Sbjct: 264 PTGIVVSCQNERSQHQNKQTALKILKAKLYQLEMEKKRREIQEIQGELKDISWGNQIRSY 323
Query: 406 VLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
+ HPY MVKD RT E ++ D+V++GD+D FI + L
Sbjct: 324 IFHPYTMVKDHRTGVETANVDAVMDGDIDMFIEAEL 359
>gi|15644327|ref|NP_229379.1| peptide chain release factor 2 [Thermotoga maritima MSB8]
gi|7388057|sp|Q9X1R5.1|RF2_THEMA RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|4982148|gb|AAD36646.1|AE001802_15 peptide chain release factor RF-2 [Thermotoga maritima MSB8]
Length = 369
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 155/336 (46%), Positives = 223/336 (66%), Gaps = 7/336 (2%)
Query: 108 LNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLARE 167
+N L + +L P++WDD A RE+ + ++K + + + + +++A E
Sbjct: 31 INKELEEVEKKLTDPSVWDDQKKA----REYTQKLKRLKNISEDLKRVRSLFEDLEVAIE 86
Query: 168 --ENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASM 225
+ D E+ E + + K+ EL+ +L+G+ DP + Y+ V GAGGTES DWA M
Sbjct: 87 LSDEDQEMAQHVEEIVQELEGAVKKLELEIILNGKYDPNNAYLSVHPGAGGTESQDWAQM 146
Query: 226 VLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPF 285
+L+MY WA+R+G+ V +++ PGE AGIK ATI + GEYA+GY K E GVHRLVRISPF
Sbjct: 147 LLRMYMRWAERKGFDVEIVEFQPGEEAGIKDATILIKGEYAYGYLKHESGVHRLVRISPF 206
Query: 286 DSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHI 345
D+ +RRHTSFA+V VIP D ++I DL+IE FR+ G GGQ+ N T+SAVRI H+
Sbjct: 207 DAARRRHTSFASVNVIPEI-DDDVDIEIRPEDLKIETFRASGHGGQYVNKTESAVRITHL 265
Query: 346 PTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTY 405
PTGI +CQNERSQHQNK +A+ +L++++ QLE+ ++ + E L DISWGNQIR+Y
Sbjct: 266 PTGIVVSCQNERSQHQNKQTALKILKAKLYQLEMEKKRREIQEIQGELKDISWGNQIRSY 325
Query: 406 VLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
+ HPY MVKD RT E ++ D+V++GD+D FI + L
Sbjct: 326 IFHPYTMVKDHRTGVETANVDAVMDGDIDMFIEAEL 361
>gi|353328587|ref|ZP_08970914.1| protein chain release factor B [Wolbachia endosymbiont wVitB of
Nasonia vitripennis]
Length = 337
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 151/335 (45%), Positives = 225/335 (67%), Gaps = 2/335 (0%)
Query: 108 LNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLARE 167
+ +RL L ++ + NLW D A I +E + +++ E + + I ++K A +
Sbjct: 1 MKLRLEELDSQASNDNLWQDNQKAQEILKERSKIKHEIESFSKLESDYNDSISLMKSAID 60
Query: 168 ENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVL 227
END E E L+ + + K KE ++L +GE D +C++E+ +GAGGTES DW M++
Sbjct: 61 ENDEEFFSEVKGELVKLEKLIKLKETESLFTGEADNNNCFLEIHSGAGGTESNDWTEMLM 120
Query: 228 QMYKSWAQ-RRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFD 286
+MY WA+ ++V +++++ G+ GIK TIK+ GE A+G+AK+E GVHRLVRISPFD
Sbjct: 121 RMYTRWAEIYHNFKVEVVEKLDGDAVGIKSTTIKIIGEKAYGWAKSESGVHRLVRISPFD 180
Query: 287 SGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIP 346
+ +RHTSFA+V V P DS + ++E DL+I+ +R+ GAGGQH N T+SAVRI HIP
Sbjct: 181 ANGKRHTSFASVGVTPVIEDS-IDIVVDEKDLKIDTYRASGAGGQHVNKTESAVRITHIP 239
Query: 347 TGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYV 406
TG+ A CQN RSQH+NK A+ +L+ R+ Q+E+ ++ Q AE DI WG+QIR+YV
Sbjct: 240 TGVVAQCQNGRSQHKNKDEALKLLKGRLYQIELEKKEQKMAEEYGKKCDIGWGSQIRSYV 299
Query: 407 LHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
+HPY+MVKDLRT +EV + +SV +G++D FI+S L
Sbjct: 300 MHPYQMVKDLRTGHEVGNINSVFDGNIDCFIVSVL 334
>gi|431805419|ref|YP_007232320.1| peptide chain release factor 2 [Liberibacter crescens BT-1]
gi|430799394|gb|AGA64065.1| Peptide chain release factor 2 [Liberibacter crescens BT-1]
Length = 333
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 151/331 (45%), Positives = 224/331 (67%), Gaps = 1/331 (0%)
Query: 112 LNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDT 171
++ L+ + PNLW+D A ++ +E L + +K E+ L++I ++LA E +
Sbjct: 1 MDWLNNKAEDPNLWEDSEKASKLMQERQHLDNSISSIKDLEKNFLDNIAFLELAEAEGEQ 60
Query: 172 ELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYK 231
L E EALL ++ +++ ++ + LLSGE D Y+E+ +GAGGTES DWA+M+L+MY
Sbjct: 61 FLVCEVEEALLKLKCETERRQFETLLSGEADSNDSYLEIHSGAGGTESQDWANMLLRMYM 120
Query: 232 SWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRR 291
W++R+G++V L++ GE GIK ATI + G ++G+ K E GVHRLVRISP+DS RR
Sbjct: 121 RWSERKGFKVELLEMHDGEETGIKSATILIKGHNSYGWLKTESGVHRLVRISPYDSNSRR 180
Query: 292 HTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITA 351
HTSF+++ V P D + ++INESD RI+ +R+ G+GGQH NTTDSAVRI HIPT I
Sbjct: 181 HTSFSSIWVYP-VIDEAIEIEINESDCRIDTYRASGSGGQHINTTDSAVRITHIPTNIVV 239
Query: 352 TCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYR 411
CQ ERSQH+NK+ A +L++R+ +LE+ ++ + + S +I WG QIR+YVL PY+
Sbjct: 240 QCQQERSQHKNKSKAWDMLRARLYELELKKREEAVSIEASSKPEIGWGRQIRSYVLQPYQ 299
Query: 412 MVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
+VKDLRT E + P VL+G+LD FI + L+
Sbjct: 300 LVKDLRTGVENTAPLDVLDGNLDDFIKAALA 330
>gi|209548908|ref|YP_002280825.1| peptide chain release factor 2 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|424914513|ref|ZP_18337877.1| peptide chain release factor 2 [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|209534664|gb|ACI54599.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|392850689|gb|EJB03210.1| peptide chain release factor 2 [Rhizobium leguminosarum bv.
trifolii WSM597]
Length = 376
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 162/349 (46%), Positives = 237/349 (67%), Gaps = 1/349 (0%)
Query: 94 QSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQ 153
Q+I ++++ L W RL+ L+ + PNLW+D A ++ RE L + VK EQ
Sbjct: 14 QAITLLRRHLDWDQAIRRLDWLNNKAEDPNLWNDSTEAQKLMRERQQLDDGISGVKQLEQ 73
Query: 154 ELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAG 213
+L ++I++I+L EE D + E+ + L ++ ++ ++++A+LSGE D Y+EV +G
Sbjct: 74 QLNDNIELIELGEEEGDEGVVKEAEDTLKALKAEAARRQVEAMLSGEADGNDTYLEVHSG 133
Query: 214 AGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAE 273
AGGTES DWA+M+L+MY WA+R+ ++V L++ GE AGIK AT+ V G A+G+ K E
Sbjct: 134 AGGTESQDWANMLLRMYTRWAERQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWLKTE 193
Query: 274 VGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHA 333
GVHRLVRISP+DS RRHTSF+++ V P D S ++INE D RI+ +RS GAGGQH
Sbjct: 194 SGVHRLVRISPYDSNARRHTSFSSIWVYP-VVDDSIQIEINEGDCRIDTYRSSGAGGQHV 252
Query: 334 NTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSL 393
NTTDSAVRI H+PTGI CQ ERSQH+N+A A +L++R+ + E+ ++ + S
Sbjct: 253 NTTDSAVRITHMPTGIVVQCQQERSQHKNRAKAWDMLRARMYEAELKKREDAASAEAASK 312
Query: 394 TDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
TDI WG+QIR+YVL PY++VKDLRT + PD VL+G+L+ F+ + L+
Sbjct: 313 TDIGWGHQIRSYVLQPYQLVKDLRTGVASTAPDDVLDGELNEFMEAALA 361
>gi|404254623|ref|ZP_10958591.1| peptide chain release factor 2 [Sphingomonas sp. PAMC 26621]
Length = 321
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 163/307 (53%), Positives = 208/307 (67%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + +A E EL + ++I++A E DTE+E E + AL + R++ ++ A
Sbjct: 2 RERRRLDEAITATRAIESELNDTAELIEMAEAEGDTEMESEGVAALADLARRADTDKVKA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LL+GE D YIEV AGAGGTES DWA M+ +MY W +R G +V L+D+ GE AGIK
Sbjct: 62 LLAGEADGNDTYIEVNAGAGGTESQDWAGMLSRMYSRWGERHGLKVELIDQHSGEQAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
AT+ + GE A+GYAK E GVHRLVRISP+DS RRHTSFA+V V P D + V+ NE
Sbjct: 122 SATLLLKGENAYGYAKTESGVHRLVRISPYDSAARRHTSFASVWVYPVV-DDNIDVEYNE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SDLRI+ +R+ GAGGQH NTTDSAVRI HIPTGI CQN+RSQH+NKA A L++R+
Sbjct: 181 SDLRIDTYRASGAGGQHINTTDSAVRITHIPTGIVVQCQNQRSQHKNKAEAYNQLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+A + TDI WG+QIR+YVL PY+MVKDLRT S P VL+GDLD
Sbjct: 241 ERELAIREAAANAENAGKTDIGWGHQIRSYVLQPYQMVKDLRTGVTSSSPSDVLDGDLDA 300
Query: 436 FILSYLS 442
F+ + LS
Sbjct: 301 FMAAALS 307
>gi|424890804|ref|ZP_18314403.1| peptide chain release factor 2 [Rhizobium leguminosarum bv.
trifolii WSM2012]
gi|393173022|gb|EJC73067.1| peptide chain release factor 2 [Rhizobium leguminosarum bv.
trifolii WSM2012]
Length = 376
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 162/349 (46%), Positives = 237/349 (67%), Gaps = 1/349 (0%)
Query: 94 QSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQ 153
Q+I ++++ L W RL+ L+ + PNLW+D A ++ RE L + VK EQ
Sbjct: 14 QAITLLRRHLDWDQAIRRLDWLNNKAEDPNLWNDATEAQKLMRERQQLDDGISGVKQLEQ 73
Query: 154 ELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAG 213
+L ++I++I+L EE D + E+ + L ++ ++ ++++A+LSGE D Y+EV +G
Sbjct: 74 QLNDNIELIELGEEEGDEGVVKEAEDTLKALKAEAARRQVEAMLSGEADGNDTYLEVHSG 133
Query: 214 AGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAE 273
AGGTES DWA+M+L+MY WA+R+ ++V L++ GE AGIK AT+ V G A+G+ K E
Sbjct: 134 AGGTESQDWANMLLRMYTRWAERQRFKVELLEVHDGEEAGIKSATLLVKGHNAYGWLKTE 193
Query: 274 VGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHA 333
GVHRLVRISP+DS RRHTSF+++ V P D S ++INE D RI+ +RS GAGGQH
Sbjct: 194 SGVHRLVRISPYDSNARRHTSFSSIWVYP-VVDDSIQIEINEGDCRIDTYRSSGAGGQHV 252
Query: 334 NTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSL 393
NTTDSAVRI H+PTGI CQ ERSQH+N+A A +L++R+ + E+ ++ + S
Sbjct: 253 NTTDSAVRITHMPTGIVVQCQQERSQHKNRAKAWDMLRARMYEAELKKREDAASAEAASK 312
Query: 394 TDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
TDI WG+QIR+YVL PY++VKDLRT + PD VL+G+L+ F+ + L+
Sbjct: 313 TDIGWGHQIRSYVLQPYQLVKDLRTGVASTAPDDVLDGELNEFMEAALA 361
>gi|378825644|ref|YP_005188376.1| Peptide chain release factor 1 RF-1 [Sinorhizobium fredii HH103]
gi|365178696|emb|CCE95551.1| Peptide chain release factor 1 RF-1 [Sinorhizobium fredii HH103]
Length = 342
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 159/321 (49%), Positives = 224/321 (69%), Gaps = 1/321 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
P LW+D A ++ RE L + ++ FEQ+L ++I++I+L EE D+ + E+ EAL
Sbjct: 8 PALWNDASEAQKLMRERQQLDDGITGLRRFEQQLSDNIELIELGEEEGDSAIVTEAEEAL 67
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
+R ++ +K+++A+LSGE D Y+EV +GAGGTES DWA+M+L+MY WA+R+GY+V
Sbjct: 68 RQLRNEAAKKQVEAMLSGEADQNDTYLEVHSGAGGTESQDWANMLLRMYSRWAERQGYKV 127
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
LM+ GE AGIK AT+ V G A+G+ K E GVHRLVRISP+DS RRHTSF+++ V
Sbjct: 128 ELMEIQDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFSSIWVY 187
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D S + INE D RI+ +RS GAGGQH NTTDSAVRI H+P+GI CQ ERSQH+
Sbjct: 188 PVV-DDSIQIDINEGDCRIDTYRSSGAGGQHVNTTDSAVRITHMPSGIVVQCQQERSQHK 246
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
N+A A +L++R+ + E+ ++ S TDI WG+QIR+YVL PY++VKDLRT E
Sbjct: 247 NRAKAWDMLRARLYEAELKKREDAANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVE 306
Query: 422 VSDPDSVLEGDLDGFILSYLS 442
+ P VL+G+L+ F+ + L+
Sbjct: 307 STSPGDVLDGELNEFMEAALA 327
>gi|345863106|ref|ZP_08815319.1| peptide chain release factor 2 [endosymbiont of Tevnia jerichonana
(vent Tica)]
gi|345877278|ref|ZP_08829030.1| peptide chain release factor 2, programmed frameshift [endosymbiont
of Riftia pachyptila (vent Ph05)]
gi|344225666|gb|EGV52017.1| peptide chain release factor 2, programmed frameshift [endosymbiont
of Riftia pachyptila (vent Ph05)]
gi|345125989|gb|EGW55856.1| peptide chain release factor 2 [endosymbiont of Tevnia jerichonana
(vent Tica)]
Length = 348
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 156/335 (46%), Positives = 219/335 (65%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL + EL P +W D A + RE SL ++ + A + L + +D++++A EE D
Sbjct: 16 RLVEVLRELEDPGVWSDQARAQALGRERASLEAVVETIDALDVGLADAVDLLEMAVEEAD 75
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
E + L ++ E E + SGE+DP + ++++QAG+GGTE+ DWA M+L+MY
Sbjct: 76 DEALDAVVADLDAFEQRIAELEFRRMFSGEMDPSNAFLDIQAGSGGTEAQDWAEMLLRMY 135
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
W + G++ LM+ PGE+AGIK ATI+ +GEYAFG+ + E GVHRLVR SPFDSG R
Sbjct: 136 LRWGEAHGFKTELMEASPGEVAGIKSATIRFEGEYAFGWLRTETGVHRLVRKSPFDSGNR 195
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSF+AV V P D S ++IN +DLRI+ +R+ GAGGQH N T+SAVRI H PTGI
Sbjct: 196 RHTSFSAVFVSPEI-DDSIEIEINPADLRIDVYRASGAGGQHVNRTESAVRITHNPTGIV 254
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+NK AM L++++ +LEI +Q + + +DI WG+QIR+YVL
Sbjct: 255 VQCQNDRSQHKNKDQAMKQLKAKLYELEIQKQRETQQAVEDTKSDIGWGSQIRSYVLDAS 314
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRTN E + +VL+G LD FI + L + L
Sbjct: 315 R-IKDLRTNVETGNTQAVLDGGLDIFIEASLKSGL 348
>gi|408379573|ref|ZP_11177167.1| peptide chain release factor 2 [Agrobacterium albertimagni AOL15]
gi|407747057|gb|EKF58579.1| peptide chain release factor 2 [Agrobacterium albertimagni AOL15]
Length = 321
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 151/307 (49%), Positives = 216/307 (70%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + VK EQ + ++I++I++ EE D + ++ + L ++ ++ ++++A
Sbjct: 2 RERQQLDDSIAGVKRLEQAMNDNIELIEMGEEEGDESVVKDAEDQLKALKTEAARRQVEA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
+LSGE D Y+EV +GAGGTES DWA+M+L+MY WA+R G++V +++ GE AGIK
Sbjct: 62 MLSGEADGNDTYVEVHSGAGGTESQDWANMLLRMYTRWAERSGFKVEVLEVHDGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI + G A+G+ K E GVHRLVRISP+DS RRHTSF+++ V P D S ++INE
Sbjct: 122 SATILIKGHNAYGWMKTESGVHRLVRISPYDSNARRHTSFSSIWVYPVV-DDSIQIEINE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD RI+ +RS GAGGQH NTTDSAVRI HIPTGI CQ ERSQH+N+A A +L++R+
Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIAVACQQERSQHKNRAKAWDMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
++E+ ++ + S TDI WG+QIR+YVL PY++VKDLRT E +DPDSVL G+L+
Sbjct: 241 EVELKKREEAANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTDPDSVLNGELNE 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMEAALA 307
>gi|365882317|ref|ZP_09421564.1| Peptide chain release factor 2 (RF-2) [Bradyrhizobium sp. ORS 375]
gi|365289374|emb|CCD94095.1| Peptide chain release factor 2 (RF-2) [Bradyrhizobium sp. ORS 375]
Length = 323
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 152/307 (49%), Positives = 212/307 (69%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
+E SL + + E+EL ++I+MI+L E+D + E+ AL ++++ +EL+A
Sbjct: 2 QERTSLEDSLTGIGKVERELSDNIEMIELGEAEDDAGVVTEAENALKELKKEVARRELEA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+EV AGAGGTES DWASM+L+MY WA+ G++V ++E GE AGIK
Sbjct: 62 LLSGEADKFDTYLEVHAGAGGTESQDWASMLLRMYTRWAETHGFKVEFLEESLGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI++ G A+G+ K E GVHRLVRISPFDS RRHTSF++V + P D S + I E
Sbjct: 122 SATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVI-DDSIKIDIKE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD+R++ RSGGAGGQH N T+SAVR+ HIPTG+ CQ RSQH+N+A A +L++R+
Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
++E+ ++ + A + T+I WG+QIR+YVL PY+MVKDLRT + SD VL GDLD
Sbjct: 241 EIELKKREEKAAADQAAKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLNGDLDE 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMAATLA 307
>gi|148560211|ref|YP_001258893.1| peptide chain release factor 2 [Brucella ovis ATCC 25840]
gi|256369345|ref|YP_003106853.1| peptide chain release factor 2 [Brucella microti CCM 4915]
gi|340790546|ref|YP_004756011.1| peptide chain release factor 2 [Brucella pinnipedialis B2/94]
gi|148371468|gb|ABQ61447.1| peptide chain release factor 2 [Brucella ovis ATCC 25840]
gi|255999505|gb|ACU47904.1| peptide chain release factor 2 [Brucella microti CCM 4915]
gi|340559005|gb|AEK54243.1| peptide chain release factor 2 [Brucella pinnipedialis B2/94]
Length = 375
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 155/351 (44%), Positives = 225/351 (64%), Gaps = 1/351 (0%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
I Q+I ++++ L W RL L+ P LW+D A ++ RE L + +
Sbjct: 12 IQQAISLLRRHLDWDQAVKRLGYLNQRAEDPTLWNDAQEAQKLMRERQQLEDSINGINHL 71
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
+Q L + +++I + EE D + ++ + + ++ + +++D LLSGE D Y+EV
Sbjct: 72 KQTLNDSVELIAMGEEEGDKSIVEDAEKTIRDLKDEIDRRQIDMLLSGEADANDTYLEVH 131
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AGAGGTES DWASM+L+MY WA+R G +V +M+ GE AGIK ATI V G ++G K
Sbjct: 132 AGAGGTESQDWASMLLRMYTRWAERNGRKVEVMEVHEGEEAGIKSATILVKGHNSYGMLK 191
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
E GVHRLVRISP+DS RRHTSFA++ V P D + VQ+ E+D+RI+ +R+ GAGGQ
Sbjct: 192 TESGVHRLVRISPYDSNARRHTSFASIWVYP-VIDDNIEVQVTEADVRIDTYRASGAGGQ 250
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQ 391
H NTTDSAVRI HI TGI CQ ERSQH+N+ A +L++R+ + E+ ++ +
Sbjct: 251 HVNTTDSAVRITHIATGIVVQCQAERSQHKNREKAWSMLRARLYEEELKKREEATDAANA 310
Query: 392 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
+ TDI WG+QIR+YVL PY++VKDLRT E ++P VL+G + F+ + L+
Sbjct: 311 TKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTNPQEVLDGAVTPFMEAALA 361
>gi|301100688|ref|XP_002899433.1| peptide chain release factor, putative [Phytophthora infestans
T30-4]
gi|262103741|gb|EEY61793.1| peptide chain release factor, putative [Phytophthora infestans
T30-4]
Length = 378
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 154/341 (45%), Positives = 225/341 (65%), Gaps = 5/341 (1%)
Query: 115 LSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELE 174
L E P LWDD +A + + +L + V ++ L+ ++ LA+EE D +
Sbjct: 37 LRQEAADPKLWDDASNAASVVQRLAALESRETRVHELHRQFLDTKELYVLAKEEEDESML 96
Query: 175 LESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWA 234
+ + A+ +R ++++ L+ LLS E D SC++E+QAGAGGT+S DW +M+ +MY W+
Sbjct: 97 GDCVSAMTVVRAEAQQLRLEFLLSHETDAHSCFLEIQAGAGGTDSCDWTAMLARMYARWS 156
Query: 235 QRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTS 294
+ RG++V +DE G+ AG + +K+DG YA+G+AK E GVHRLVRISPFDS RRHTS
Sbjct: 157 EMRGFQVQYVDESVGDEAGFRSVVLKLDGVYAYGWAKNEAGVHRLVRISPFDSAGRRHTS 216
Query: 295 FAAVAVIPNS--GDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITAT 352
FA V V P + G SS ++++ DLRI+ FRS G GGQH N+TDSA+RI H+ TGI
Sbjct: 217 FAQVRVYPMAAEGRSSAEIEVSTKDLRIDTFRSSGPGGQHVNSTDSAIRITHLRTGIVVQ 276
Query: 353 CQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRM 412
Q++RSQH+NKA AM +L++++ Q ++ +A+ + Q L D +WGNQIR+YVLHPY++
Sbjct: 277 SQSDRSQHRNKAEAMAMLRAKLYQRKLEEEAKARQKFAQGLGDNAWGNQIRSYVLHPYQL 336
Query: 413 VKDLRTNYEVSDPDSVLEGDLDGFI---LSYLSASLDKDEG 450
VKD RTNY + VL+GD+D FI L + +A + DEG
Sbjct: 337 VKDHRTNYSEGNIAQVLDGDIDRFIEKMLLHQTAPNNPDEG 377
>gi|365893623|ref|ZP_09431793.1| Peptide chain release factor 2 (RF-2) [Bradyrhizobium sp. STM 3843]
gi|365425557|emb|CCE04335.1| Peptide chain release factor 2 (RF-2) [Bradyrhizobium sp. STM 3843]
Length = 323
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 153/307 (49%), Positives = 212/307 (69%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
+E SL + + E+EL ++I+MI+L END + E+ AL ++++ +EL+A
Sbjct: 2 QERTSLEDSLTGIGKVERELNDNIEMIELGEAENDAGVVAEAENALKDLKKEVARRELEA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+EV AGAGGTES DWA M+L+MY WA++ G+++ ++E GE AGIK
Sbjct: 62 LLSGEADKFDTYLEVHAGAGGTESQDWAQMLLRMYARWAEKHGFKIEYLEESQGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI++ G A+G+ K E GVHRLVRISPFDS RRHTSF++V + P D S + I E
Sbjct: 122 SATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVI-DDSIKIDIKE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD+R + RSGGAGGQH N T+SAVR+ HIPTGI CQ RSQH+N+A A +L++R+
Sbjct: 181 SDVRTDTMRSGGAGGQHVNKTESAVRLTHIPTGIAVVCQAGRSQHKNRAQAWDMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
++E+ ++ + A + TDI WG+QIR+YVL PY+MVKDLRT + SD VL+GDLD
Sbjct: 241 EIELKKREEKAAAEQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDE 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMAATLA 307
>gi|114771120|ref|ZP_01448560.1| peptide chain release factor 2 [Rhodobacterales bacterium HTCC2255]
gi|114548402|gb|EAU51288.1| peptide chain release factor 2 [alpha proteobacterium HTCC2255]
Length = 375
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 159/351 (45%), Positives = 236/351 (67%), Gaps = 2/351 (0%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
I +S++++K+R+ W R+ A P+LW++P A ++ RE L + K
Sbjct: 12 IHKSLELLKQRMDWDTAEHRMEEFDAMSENPDLWNNPEKAQKLMRERQMLSDSISNFKEL 71
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
L ++I++I+L E D + E+ +L ++++S ++EL+ALL+GE+D ++++
Sbjct: 72 SSNLQDNIELIELGEIEEDEVIIKEAENNILIIQQESAKQELEALLNGEVDSNDTFLQIN 131
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AGAGGTES DWA+M+ +MY WA+++GY+V M+E G+ AGIK T ++ G A+G+ K
Sbjct: 132 AGAGGTESCDWANMLARMYVRWAEQKGYQVDRMEESVGDEAGIKSVTYQIKGHNAYGWMK 191
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
+E GVHRLVRISPFDS +RHTSF++V V P D + ++IN S++R++ +RS GAGGQ
Sbjct: 192 SESGVHRLVRISPFDSNAKRHTSFSSVWVYP-VVDDNIDIEINPSEIRVDTYRSSGAGGQ 250
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQ 391
H NTTDSAVRI HIPT I +E+SQHQN+A+ M L+SR+ +LE+ ++ + E
Sbjct: 251 HVNTTDSAVRITHIPTNIVVQS-SEKSQHQNRANCMAALKSRLYELEMRKRTEGIQEAHD 309
Query: 392 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
+ D WGNQIR+YVLHPY+MVKDLRTN E SD VL GDLD F+ + L+
Sbjct: 310 NKGDAGWGNQIRSYVLHPYQMVKDLRTNVETSDSQGVLNGDLDMFMAATLA 360
>gi|420256137|ref|ZP_14758997.1| peptide chain release factor 2, partial [Burkholderia sp. BT03]
gi|398043797|gb|EJL36671.1| peptide chain release factor 2, partial [Burkholderia sp. BT03]
Length = 420
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 157/362 (43%), Positives = 235/362 (64%), Gaps = 6/362 (1%)
Query: 80 ESEGDWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHG 139
+S W++ A A A S + + +VRL ++ EL PN+W+D HA + +E
Sbjct: 61 QSNPPWRTCAHAQASSGGI----FDYDAKSVRLIEVNKELEDPNVWNDSKHAQALGKEKK 116
Query: 140 SLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSG 199
L G + + A + +L + D+ +AREEND + + E + + + E + S
Sbjct: 117 LLEGVVDVLSALDNDLRDTQDLFDMAREENDEDTLVAVDEDAAKLEARVADMEFRRMFSN 176
Query: 200 ELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATI 259
DP + +I++QAGAGGTE+ DWASM+L+ Y + +R+G++ +++E G++AGIK ATI
Sbjct: 177 PADPNNAFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKTEVLEESEGDVAGIKSATI 236
Query: 260 KVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLR 319
KV+GEYA+G+ + E G+HRLVR SPFDS RHTSF++V V P D S +++N +DLR
Sbjct: 237 KVEGEYAYGFLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEI-DESFEIEVNPADLR 295
Query: 320 IERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI 379
I+ +R+ GAGGQH N TDSAVRI H+P+GI CQN+RSQH+N+A AM +L+SR+ + E+
Sbjct: 296 IDTYRASGAGGQHINKTDSAVRITHVPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEM 355
Query: 380 ARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILS 439
++ + +D+ WG+QIR+YVL R +KDLRTN E+S+ SVL+GDLD FI +
Sbjct: 356 RKRQSEQDKLEAGKSDVGWGHQIRSYVLDNSR-IKDLRTNVEISNTKSVLDGDLDPFISA 414
Query: 440 YL 441
L
Sbjct: 415 SL 416
>gi|242240700|ref|YP_002988881.1| hypothetical protein Dd703_3297 [Dickeya dadantii Ech703]
gi|242132757|gb|ACS87059.1| hypothetical protein Dd703_3297 [Dickeya dadantii Ech703]
Length = 365
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 159/360 (44%), Positives = 230/360 (63%), Gaps = 2/360 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
K+ ++ V++ L + RL ++AEL +P++W++P A + +E SL +
Sbjct: 8 KNRIQDLSDRTAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPDRAQALGKERSSLEMIV 67
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
++ Q L + ++ LA EE+D E E++ L + K + E + SGE D
Sbjct: 68 DTIEQMNQGLEDVTGLLDLAVEEDDEETFNETIIELDQLENKLGQLEFRRMFSGEYDSAD 127
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
CYI++QAG+GGTE+ DWASM+L+MY WA+ +G++ +++E GE+AGIK ATIKV GEY
Sbjct: 128 CYIDLQAGSGGTEAQDWASMLLRMYLRWAESKGFKTEVIEESEGEVAGIKSATIKVVGEY 187
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
A+G+ + E GVHRLVR SPFDSG RRHTSF++ V P D ++IN +DLRI+ +R+
Sbjct: 188 AYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEV-DDDIDIEINPADLRIDVYRA 246
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQM 385
GAGGQH N T+SAVRI HIPT I CQN+RSQH+NK AM L++++ + E+ ++
Sbjct: 247 SGAGGQHVNRTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMRQLKAKLYEFELQKKNAE 306
Query: 386 NAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ +DI WG+QIR+YVL R +KDLRT E + SVL+GDLD FI + L A L
Sbjct: 307 KQAMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQSVLDGDLDKFIEASLKAGL 365
>gi|227549373|ref|ZP_03979422.1| peptide chain release factor 2 [Corynebacterium lipophiloflavum DSM
44291]
gi|227078558|gb|EEI16521.1| peptide chain release factor 2 [Corynebacterium lipophiloflavum DSM
44291]
Length = 365
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 163/348 (46%), Positives = 226/348 (64%), Gaps = 11/348 (3%)
Query: 95 SIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQE 154
++ I+K + L R L + N P+LWDDP HA +++ E ++ ++K+V + +
Sbjct: 15 TLTTIEKVIDLDELAARARELEQQANDPSLWDDPAHAQKVTTELSNVQARLKKVASLRER 74
Query: 155 LLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGA 214
+ + M +LA EE + L + L AL E+ +LSGE D + +++GA
Sbjct: 75 IDDLPVMYELAEEEGEPALVDDELAAL---EESIGSLEVQTMLSGEYDEREAVVNIRSGA 131
Query: 215 GGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEV 274
GG ++ DWA M+++MY WA++ G++V + D E AGIK AT V GEY +G E
Sbjct: 132 GGVDAADWAEMLMRMYTRWAEKNGHKVEVYDISYAEEAGIKSATFVVRGEYMYGQLSVEQ 191
Query: 275 GVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHAN 334
G HRLVRISPFD+ RR TSFA V V+P + + H+ I +SD+R++ +RS G GGQ N
Sbjct: 192 GAHRLVRISPFDNQGRRQTSFAEVEVLPVV-EQTDHIDIPDSDIRVDVYRSSGPGGQSVN 250
Query: 335 TTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ---AQMNAEHTQ 391
TTDSAVRI H+PTGI TCQNE+SQ QNKASA+GVLQS++ LE RQ A+M+A
Sbjct: 251 TTDSAVRITHLPTGIVVTCQNEKSQIQNKASALGVLQSKL--LERKRQEEKAEMDA--LG 306
Query: 392 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILS 439
+ + SWGNQ+R+YVLHPY+MVKDLRTNYEV DP VL+GD+DGF+ S
Sbjct: 307 AGGNASWGNQMRSYVLHPYQMVKDLRTNYEVGDPQKVLDGDIDGFLES 354
>gi|345872419|ref|ZP_08824354.1| peptide chain release factor 2 [Thiorhodococcus drewsii AZ1]
gi|343918967|gb|EGV29724.1| peptide chain release factor 2 [Thiorhodococcus drewsii AZ1]
Length = 365
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 164/363 (45%), Positives = 233/363 (64%), Gaps = 13/363 (3%)
Query: 92 IAQSIQVIKKRLQ-------WKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGK 144
IA I +K RL+ + RL + EL P +W+DP A + RE +L
Sbjct: 7 IAHQINDLKGRLESLRGYLDYAERQDRLTEVLRELEDPAIWNDPSRAQALGRERATLEAV 66
Query: 145 MKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPC 204
+ + L + +++++A EE D E + L T + E E + SGE+D
Sbjct: 67 VLTIDEMTAALTDADELLEMAAEEADDETLTSLVADLETYESRVAELEFRRMFSGEMDSK 126
Query: 205 SCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGE 264
+ ++++QAG+GGTE+ DWA M+L+M+ W +RRG++ LM+ PGE+AGIK ATI+ +GE
Sbjct: 127 NAFVDIQAGSGGTEAQDWAEMLLRMFLRWGERRGFKTELMEASPGEVAGIKSATIRFEGE 186
Query: 265 YAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFR 324
YAFG+ + E GVHRLVR SPFDSG RRHTSFA++ V P D S ++IN +DLRI+ +R
Sbjct: 187 YAFGWLRTETGVHRLVRKSPFDSGNRRHTSFASLFVSPEV-DDSVEIEINPADLRIDVYR 245
Query: 325 SGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI-ARQA 383
+ GAGGQH N T+SAVRI H+PTG+ CQN+RSQH+NK AM L++++ +LE+ RQA
Sbjct: 246 ASGAGGQHVNRTESAVRITHMPTGLVTQCQNDRSQHKNKDQAMKQLKAKLYELEMQKRQA 305
Query: 384 QMNA-EHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
A E T+S DI WG+QIR+YVL R +KDLRT E+++ SVL+G+LD FI + L
Sbjct: 306 TQQALEDTKS--DIGWGSQIRSYVLDQSR-IKDLRTGVEIANTQSVLDGNLDPFIEASLK 362
Query: 443 ASL 445
+ L
Sbjct: 363 SGL 365
>gi|89068846|ref|ZP_01156229.1| peptide chain release factor 2 [Oceanicola granulosus HTCC2516]
gi|89045616|gb|EAR51679.1| peptide chain release factor 2 [Oceanicola granulosus HTCC2516]
Length = 374
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 164/356 (46%), Positives = 240/356 (67%), Gaps = 5/356 (1%)
Query: 91 AIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKA 150
AI +S+ ++ +R+ + RL +A + P LWDDP A ++ RE +L+ ++
Sbjct: 11 AIEKSLALLAQRMDRETAPHRLEEFNARVEDPTLWDDPAAAQKLMRERQALVDSIETYDG 70
Query: 151 FEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEV 210
+EL +++++I+L E+D+E+ E+ AL ++ ++ +KEL+ALL GE D ++E+
Sbjct: 71 IARELADNVELIELGEMEDDSEVVAEAEAALAALKERAAQKELEALLDGEADGNDTFLEI 130
Query: 211 QAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYA 270
AGAGGTE+ DWA M+ +MY WA++RGY+V L E G AGIK + K+ G A+G+
Sbjct: 131 NAGAGGTEACDWAQMLQRMYVRWAEKRGYKVELQSEEAGTEAGIKSVSYKISGPNAYGWL 190
Query: 271 KAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGG 330
K+E GVHRLVRISPF G R TSFA+V V P D + ++IN S++R++ +RS GAGG
Sbjct: 191 KSESGVHRLVRISPFGKGT-RETSFASVWVYPVV-DDNIEIEINPSEIRLDTYRSSGAGG 248
Query: 331 QHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ-AQMNAEH 389
QH NTTDSAVRI H+PTGI T +E+SQHQN+ AM L+SR+ Q+E+ R+ A +NA H
Sbjct: 249 QHVNTTDSAVRITHLPTGIVVTS-SEKSQHQNRDIAMKALKSRLYQMELDRRTADINAAH 307
Query: 390 TQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
++ WGNQIR+YVL PY+MVKDLRT +E SD VL+G LDGF+ + L+ ++
Sbjct: 308 -EAKGSAGWGNQIRSYVLQPYQMVKDLRTGHETSDTGGVLDGALDGFMAATLAMAV 362
>gi|384136540|ref|YP_005519254.1| hypothetical protein TC41_2844 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
gi|339290625|gb|AEJ44735.1| hypothetical protein TC41_2844 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
Length = 342
Score = 311 bits (797), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 159/331 (48%), Positives = 220/331 (66%), Gaps = 6/331 (1%)
Query: 122 PNLWDDPVHAGRISREHG---SLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
P+ WD+P A +I E S++ MK +++ Q+ ++LA+EE+D +L E+
Sbjct: 4 PDFWDNPDRAQKIIAEMNGVKSVVDTMKRLESLHQDAEV---ALQLAQEEDDPDLFAEAN 60
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
++ + E EL +LSGE D + +E+ GAGGTES DWASM+L+MY WA+ G
Sbjct: 61 RLAEQLKSEMDEFELQLMLSGEYDKNNAILELHPGAGGTESQDWASMLLRMYTRWAEDHG 120
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
Y+V ++D +PGE AGIK T+ V G A+GY KAE GVHRLVRISPFD+ RRHTSFA+V
Sbjct: 121 YKVEVLDYLPGEEAGIKSVTLLVKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFASV 180
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
VIP + ++I +LRI+ +RS GAGGQH NTTDSAVRI HIPTGI TCQ+ERS
Sbjct: 181 DVIPEIAEDDDSIEIRPEELRIDTYRSTGAGGQHVNTTDSAVRITHIPTGIVVTCQSERS 240
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
Q QN+A AM +L+SR+ + Q A+ +I+WG+QIR+YV HPY +VKD RT
Sbjct: 241 QIQNRARAMEILKSRLAAKRREEREQELAQLRGEQKEIAWGSQIRSYVFHPYSLVKDHRT 300
Query: 419 NYEVSDPDSVLEGDLDGFILSYLSASLDKDE 449
NYE S+ +V++G++D FI +YL L +++
Sbjct: 301 NYETSNTQAVMDGEIDPFIHAYLRWQLAREQ 331
>gi|213019226|ref|ZP_03335033.1| protein chain release factor b [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|212995335|gb|EEB55976.1| protein chain release factor b [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 337
Score = 311 bits (797), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 150/335 (44%), Positives = 225/335 (67%), Gaps = 2/335 (0%)
Query: 108 LNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLARE 167
+ +RL L ++ + NLW D A I +E + +++ E + + I +++ A +
Sbjct: 1 MKLRLEELDSQASNDNLWQDNQKAQEILKERSKIKHEIESFSKLESDYNDSISLMRSAID 60
Query: 168 ENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVL 227
END E E L+ + + K KE ++L +GE D +C++E+ +GAGGTES DW M++
Sbjct: 61 ENDEEFFSEVKGELVKLEKLIKLKETESLFTGEADNNNCFLEIHSGAGGTESNDWTEMLM 120
Query: 228 QMYKSWAQ-RRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFD 286
+MY WA+ ++V +++++ G+ GIK TIK+ GE A+G+AK+E GVHRLVRISPFD
Sbjct: 121 RMYTRWAEIYHNFKVEVVEKLDGDAVGIKSTTIKIIGEKAYGWAKSESGVHRLVRISPFD 180
Query: 287 SGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIP 346
+ +RHTSFA+V V P DS + ++E DL+I+ +R+ GAGGQH N T+SAVRI HIP
Sbjct: 181 ANGKRHTSFASVGVTPVIEDS-IDIVVDEKDLKIDTYRASGAGGQHVNKTESAVRITHIP 239
Query: 347 TGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYV 406
TG+ A CQN RSQH+NK A+ +L+ R+ Q+E+ ++ Q AE DI WG+QIR+YV
Sbjct: 240 TGVVAQCQNGRSQHKNKDEALKLLKGRLYQIELEKKEQKMAEEYGKKCDIGWGSQIRSYV 299
Query: 407 LHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
+HPY+MVKDLRT +EV + +SV +G++D FI+S L
Sbjct: 300 MHPYQMVKDLRTGHEVGNINSVFDGNIDCFIVSVL 334
>gi|320355124|ref|YP_004196463.1| peptide chain release factor 2 (bRF-2) [Desulfobulbus propionicus
DSM 2032]
gi|320123626|gb|ADW19172.1| bacterial peptide chain release factor 2 (bRF-2) [Desulfobulbus
propionicus DSM 2032]
Length = 369
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 155/347 (44%), Positives = 224/347 (64%), Gaps = 7/347 (2%)
Query: 98 VIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQEL-- 155
V+K+ L ++ LL + PN WD+ A R+ R+ G L + +E+
Sbjct: 23 VLKEHLDLDGKREQVELLERQTVSPNFWDNQSEAKRVQRQLGQLQDL---IGVWEKNFGD 79
Query: 156 LEHIDMI-KLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGA 214
LE +M+ +AREEND + E + L +RR+ + EL+ + SGE D + + + AGA
Sbjct: 80 LEDAEMLLDMAREENDQDTYQEVVSGLDDLRRRVELVELECMFSGEHDANNAILTIHAGA 139
Query: 215 GGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEV 274
GGTE+ DW ++L+MY WA+ +G++ ++D +PG+ AG K TI V G+YA+GY ++EV
Sbjct: 140 GGTEAQDWVGILLRMYLRWAESKGFKADILDLLPGDEAGTKSVTIMVKGKYAYGYLRSEV 199
Query: 275 GVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHAN 334
G+HRLVRISPFD+ RRHTSFA+V V+P D ++IN+ D+RI+ +R+ G+GGQH N
Sbjct: 200 GIHRLVRISPFDASGRRHTSFASVMVMPEL-DDDVEIEINDKDIRIDTYRASGSGGQHVN 258
Query: 335 TTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLT 394
TDSA+RI H PTGI CQNERSQH NKA+AM +L +R+ + E Q +
Sbjct: 259 KTDSAIRITHFPTGIVVQCQNERSQHSNKATAMKMLMARLYEREKEEQQRTQENIQGDKK 318
Query: 395 DISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
+I+WG+QIR+YVL PYR++KD RTN E + D+VL+G LD FI +YL
Sbjct: 319 EIAWGSQIRSYVLQPYRLIKDHRTNTEEGNVDAVLDGRLDPFIKAYL 365
>gi|254191408|ref|ZP_04897912.1| peptide chain release factor 2 [Burkholderia pseudomallei Pasteur
52237]
gi|157939080|gb|EDO94750.1| peptide chain release factor 2 [Burkholderia pseudomallei Pasteur
52237]
Length = 367
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 162/362 (44%), Positives = 234/362 (64%), Gaps = 13/362 (3%)
Query: 91 AIAQSIQVIKKR-------LQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
AI S+ +++R L + + RL ++ +L PN+W+D +A + RE SL
Sbjct: 8 AIESSLADLRRRAGELRGYLDYDVKSERLAEVNKQLEDPNVWNDSKNAQALGREKKSLES 67
Query: 144 KMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDP 203
+ + A + +L + + +LA EE D E + + + + + E + S DP
Sbjct: 68 VVTTLTALDNDLRDAQALFELAHEEGDEETLVATESDAAKLEARVADIEFRRMFSNPADP 127
Query: 204 CSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDG 263
+C+I++QAGAGGTE+ DWASM+L+ Y + +R+G++ +++E G++AGIK ATIKV G
Sbjct: 128 NNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATIKVSG 187
Query: 264 EYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERF 323
EYA+GY + E G+HRLVR SPFDS RHTSF++V V P D S V+IN +DLRI+ +
Sbjct: 188 EYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEI-DDSIEVEINPADLRIDTY 246
Query: 324 RSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQA 383
R+ GAGGQH N TDSAVRI H+PTGI CQN+RSQH+N+A AM +L+SR+ + E+ ++
Sbjct: 247 RASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFEAELRKRQ 306
Query: 384 QMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSA 443
+ S TD+ WG+QIR+YVL R VKDLRTN E+S+ +VL+GDLD FI SA
Sbjct: 307 AEQDKLESSKTDVGWGHQIRSYVLDQSR-VKDLRTNVEMSNTKAVLDGDLDDFI----SA 361
Query: 444 SL 445
SL
Sbjct: 362 SL 363
>gi|440226311|ref|YP_007333402.1| peptide chain release factor 2 [Rhizobium tropici CIAT 899]
gi|440037822|gb|AGB70856.1| peptide chain release factor 2 [Rhizobium tropici CIAT 899]
Length = 342
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 157/321 (48%), Positives = 224/321 (69%), Gaps = 1/321 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
P LW+D A ++ RE L + V+A EQ+L +++++I+L EE D ++ E+ EAL
Sbjct: 8 PTLWNDASEAQKLMRERQQLDDGISGVRALEQQLADNVELIELGEEEGDADVVREAEEAL 67
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
++ ++ ++++A+LSGE D Y+EV +GAGGTES DWA+M+L+MY WA+R+ ++V
Sbjct: 68 KGLKAEAARRQVEAMLSGEADSNDTYLEVHSGAGGTESQDWANMLLRMYTRWAERQRFKV 127
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
L++ GE AGIK AT+ V G A+G+ K E GVHRLVRISP+DS RRHTSF+++ V
Sbjct: 128 ELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFSSIWVY 187
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D S ++INESD RI+ +RS GAGGQH NTTDSAVRI HIPTGI CQ ERSQH+
Sbjct: 188 PVV-DDSIQIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQCQQERSQHK 246
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
N+A A +L++R+ + E+ ++ + S TDI WG+QIR+YVL PY++VKDLRT
Sbjct: 247 NRAKAWDMLRARMYEAELMKREEAANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVS 306
Query: 422 VSDPDSVLEGDLDGFILSYLS 442
+ P VL+GDL+ F+ + L+
Sbjct: 307 STAPSDVLDGDLNEFMEAALA 327
>gi|94969367|ref|YP_591415.1| peptide chain release factor 2 [Candidatus Koribacter versatilis
Ellin345]
gi|94551417|gb|ABF41341.1| bacterial peptide chain release factor 2 (bRF-2) [Candidatus
Koribacter versatilis Ellin345]
Length = 343
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 158/337 (46%), Positives = 213/337 (63%), Gaps = 3/337 (0%)
Query: 115 LSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELE 174
+ E PNLW +P ++ R+ RE L + K + + LA+E D +
Sbjct: 4 VEKEAADPNLWGNPENSQRVMRERKRLEDALATDKDLSRRTDDITAYFDLAKEGEDITAD 63
Query: 175 LESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWA 234
L + +R ++ E + LLSG+ D S + + GAGGTES DWA M+L+MY WA
Sbjct: 64 LR--REMDQLRDIVEKLETETLLSGDSDRLSAIVTIHPGAGGTESQDWAEMLLRMYLRWA 121
Query: 235 QRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTS 294
+R+G+ T+ D PGE AG+K TI V G+ A+G +E+GVHRLVRISPFD KRRHTS
Sbjct: 122 ERQGFETTVNDYQPGEEAGLKSVTITVAGQDAYGLLTSEIGVHRLVRISPFDQAKRRHTS 181
Query: 295 FAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQ 354
FA+V V P D S V + D+R + +RSGG GGQH NTTDSAVRI H PTGI +CQ
Sbjct: 182 FASVFVSPEI-DESIEVIVKPDDIRTDTYRSGGKGGQHVNTTDSAVRITHFPTGIVVSCQ 240
Query: 355 NERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVK 414
NERSQH+N+ AM +L+S++ + E+ ++ + + S DI +G+QIR+YVLHPYRMVK
Sbjct: 241 NERSQHKNRERAMKILRSKIYEYELEKKRAASQKVEDSKLDIDFGSQIRSYVLHPYRMVK 300
Query: 415 DLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKDEGG 451
D RT +EV DPD VL+GDL GFI +YL + +GG
Sbjct: 301 DHRTKFEVGDPDRVLDGDLKGFIRAYLLMRRSESKGG 337
>gi|290968807|ref|ZP_06560344.1| peptide chain release factor 2 [Megasphaera genomosp. type_1 str.
28L]
gi|290781103|gb|EFD93694.1| peptide chain release factor 2 [Megasphaera genomosp. type_1 str.
28L]
Length = 352
Score = 311 bits (796), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 153/342 (44%), Positives = 224/342 (65%), Gaps = 1/342 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
R+ L +++ P+ W+ P A RIS+E +L +++ +A +++ + + ++LA EE D
Sbjct: 7 RIMDLDIQMSDPDFWNHPDTARRISQEATALKEEVQGHRALMEQVADLREYLELAMEEKD 66
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
T L + + + + +++E+ LLSGE D C+ + AGAGGTE+ DW M+++MY
Sbjct: 67 TSLTADIEKQYEALAGEVEKREIRLLLSGEYDRCNAIVTFHAGAGGTEAQDWTQMLIRMY 126
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA+R GY + LMD PG+ AG+K AT VDGEYA+GY K+E GVHRLVRISPFD+ R
Sbjct: 127 TRWAERNGYVMRLMDLQPGDEAGVKSATFSVDGEYAYGYLKSEKGVHRLVRISPFDAAAR 186
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSF AV V+P D V+IN ++R++ FR+ GAGGQH N T SAVR+ H+PTGI
Sbjct: 187 RHTSFTAVDVMPELPD-DVDVKINMDEVRVDYFRASGAGGQHVNKTSSAVRMTHLPTGIV 245
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQNERSQ QNK + L++++ +LE ++AQ+ AE + I WG+QIR+YV HPY
Sbjct: 246 VQCQNERSQLQNKEMCLKYLRAKLFELEEEKKAQLKAEIGGTHQAIEWGSQIRSYVFHPY 305
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKDEGGQ 452
+VKD RT+ E + +V++G+LD FI +L ++ GQ
Sbjct: 306 NLVKDHRTDVETGNTQAVMDGELDKFIEGFLQREKNRKTAGQ 347
>gi|56416847|ref|YP_153921.1| peptide chain release factor 2 [Anaplasma marginale str. St.
Maries]
gi|56388079|gb|AAV86666.1| peptide chain release factor 2 [Anaplasma marginale str. St.
Maries]
Length = 338
Score = 311 bits (796), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 155/335 (46%), Positives = 225/335 (67%), Gaps = 5/335 (1%)
Query: 115 LSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELE 174
L + + +LWDD +A ++ E + + +A E+E E ++++ LA +E+D+E
Sbjct: 4 LDSRCSSASLWDDQENAKKLLSERARVEEVLASFRALEKEYAECVELLDLA-DESDSEF- 61
Query: 175 LESL-EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSW 233
L+ L AL + R+ +K+ + + SGE D C++ ++ GAGGTES DWA+M+L+MY W
Sbjct: 62 LDGLWSALTQLERRVSQKKAECMFSGEADGSGCFLVIRPGAGGTESNDWAAMLLRMYVRW 121
Query: 234 A-QRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRH 292
A G+ ++D++ GE AG+K T+K+ G A+G+AK E GVHRLVRISPFDS RRH
Sbjct: 122 AGTFHGFTTEIVDKIDGEAAGLKSVTVKISGNGAYGWAKTESGVHRLVRISPFDSSSRRH 181
Query: 293 TSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITAT 352
TSFA+V V P + D ++I E DLRI+ +R+ GAGGQH N T+SAVRI H+P+GI
Sbjct: 182 TSFASVEVSPIA-DDKIDIEILEKDLRIDTYRASGAGGQHVNKTESAVRITHMPSGIVVQ 240
Query: 353 CQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRM 412
CQ RSQHQN+A A +L+SR+ ++E+ + + A+ S DI WG+QIR+YV+HPYRM
Sbjct: 241 CQTSRSQHQNRAEAYSLLRSRLYEMELQEKEKKMAQEHDSRCDIGWGHQIRSYVMHPYRM 300
Query: 413 VKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDK 447
VKDLRT +E D D+VL+GDLD FI + L+ L +
Sbjct: 301 VKDLRTGHETGDVDAVLDGDLDKFIAAALTYKLSQ 335
>gi|66044558|ref|YP_234399.1| peptide chain release factor 2 [Pseudomonas syringae pv. syringae
B728a]
gi|63255265|gb|AAY36361.1| bacterial peptide chain release factor 2 (bRF-2) [Pseudomonas
syringae pv. syringae B728a]
Length = 329
Score = 311 bits (796), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 153/332 (46%), Positives = 226/332 (68%), Gaps = 4/332 (1%)
Query: 115 LSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELE 174
++ EL PN+W++P +A + RE L ++ + L + D++ ++ EE D +
Sbjct: 1 MNRELEDPNVWNNPAYAQELGRERSLLAQIVETLDEMSSGLADAKDLLLMSAEEED-QAA 59
Query: 175 LESLEALLTMRRKSKEK-ELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSW 233
++ + A + R+S EK E + SG++DP + Y+++QAG+GGTE+ DWA+++L+MY W
Sbjct: 60 VDDVAAEVERLRESLEKLEFRRMFSGDMDPNNAYLDIQAGSGGTEAQDWANILLRMYLRW 119
Query: 234 AQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHT 293
A +RG+ T+M+ GE+AGIK AT+ + GEYAFG+ + E+GVHRLVR SPFDSG RRHT
Sbjct: 120 ADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGNRRHT 179
Query: 294 SFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATC 353
SF+AV V P D + + IN +DLRI+ +RS GAGGQH NTTDSAVRI H+PT +C
Sbjct: 180 SFSAVFVSPEI-DDNIEIDINPADLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVSC 238
Query: 354 QNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMV 413
QNERSQH NK +AM +L++R+ + E+ ++ + + +DI WG+QIR+YVL R +
Sbjct: 239 QNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDTKSDIGWGHQIRSYVLDASR-I 297
Query: 414 KDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
KDLRTN E SD D VL+GD+D ++++ L L
Sbjct: 298 KDLRTNIERSDCDKVLDGDIDEYLIASLKQGL 329
>gi|329850508|ref|ZP_08265353.1| peptide chain release factor 2 [Asticcacaulis biprosthecum C19]
gi|328840823|gb|EGF90394.1| peptide chain release factor 2 [Asticcacaulis biprosthecum C19]
Length = 358
Score = 311 bits (796), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 162/341 (47%), Positives = 216/341 (63%), Gaps = 3/341 (0%)
Query: 103 LQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMI 162
W RL+ L+A + P LWD P A +I+RE L ++ V+ E+EL + ++
Sbjct: 8 FDWDVALRRLDELNARVEDPTLWDKPDEAQKINRERSKLSASIEAVRTLEKELKDAVEFA 67
Query: 163 KLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDW 222
+L E D L ES L ++ + EL+ALLSGE D Y+E+ +GAGGTES DW
Sbjct: 68 ELGDMEGDESLIEESRAMLKGLKAHAGRAELEALLSGEADGNDAYVEINSGAGGTESCDW 127
Query: 223 ASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRI 282
A ++++MY WA G V + +E GE AGIK T+ + GE A+G+ K E GVHRLVRI
Sbjct: 128 AGILMRMYTRWATAHGMTVEVEEETSGEQAGIKSTTLMIKGENAYGWLKTEAGVHRLVRI 187
Query: 283 SPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRI 342
SPFDS RRHTSFA+V V P D + + IN +D+R + +R+ GAGGQH N TDSAVR+
Sbjct: 188 SPFDSSARRHTSFASVWVYPVV-DDTIVIDINPADVRTDTYRASGAGGQHINKTDSAVRL 246
Query: 343 IHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI-ARQAQMNAEHTQSLTDISWGNQ 401
HIPTGI CQ RSQH N+ A +L++R+ + E+ R+A A Q TDI WG+Q
Sbjct: 247 THIPTGIAVACQAGRSQHANRDEAWKMLRARLYEQELQKREAAQQALEDQK-TDIGWGHQ 305
Query: 402 IRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
IR+YVL PY+MVKDLRTN E SD VL+GDLD F+ + L+
Sbjct: 306 IRSYVLQPYQMVKDLRTNVETSDSQGVLDGDLDAFMGASLA 346
>gi|393721192|ref|ZP_10341119.1| peptide chain release factor 2 [Sphingomonas echinoides ATCC 14820]
Length = 321
Score = 311 bits (796), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 162/307 (52%), Positives = 209/307 (68%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + +A + EL + ++I++A E DTE+E + L AL + R+++ ++ A
Sbjct: 2 RERRRLDEAITATRAIQSELDDTAELIEMAEAEGDTEMETDGLAALADLARRAESDKIKA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LL+GE D YIEV AGAGGTES DWA M+ +MY W +R G +V L+D+ GE AGIK
Sbjct: 62 LLAGEADGNDTYIEVNAGAGGTESQDWAGMLSRMYSRWGERHGLKVELIDQHSGEQAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
AT+ + GE A+GYAK E GVHRLVRISP+DS RRHTSFA+V V P D + V+ NE
Sbjct: 122 SATLLLKGENAYGYAKTESGVHRLVRISPYDSAARRHTSFASVWVYPVV-DDNIEVEYNE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SDLRI+ +R+ GAGGQH NTTDSAVRI HIPTGI CQN+RSQH+NKA A L++R+
Sbjct: 181 SDLRIDTYRASGAGGQHINTTDSAVRITHIPTGIVVQCQNQRSQHKNKAEAYNQLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+A + TDI WG+QIR+YVL PY+MVKDLRT S P VL+GDLD
Sbjct: 241 ERELAIREAAANAENAGKTDIGWGHQIRSYVLQPYQMVKDLRTGVTSSSPSDVLDGDLDA 300
Query: 436 FILSYLS 442
F+ + LS
Sbjct: 301 FMAAALS 307
>gi|403253475|ref|ZP_10919776.1| peptide chain release factor 2 [Thermotoga sp. EMP]
gi|402811009|gb|EJX25497.1| peptide chain release factor 2 [Thermotoga sp. EMP]
Length = 367
Score = 311 bits (796), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 153/332 (46%), Positives = 221/332 (66%), Gaps = 7/332 (2%)
Query: 108 LNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLARE 167
+N L + +L P++W+D A RE+ + ++K + + + + +++A E
Sbjct: 29 INKELEEVEKKLTDPSVWNDQKKA----REYTQKLKRLKNISEDLKRVRSLFEDLEVAIE 84
Query: 168 --ENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASM 225
+ D E+ E + + K+ EL+ +L+G+ DP + Y+ V GAGGTES DWA M
Sbjct: 85 LSDEDQEMAQHVEEIVQELEGAVKKLELEIILNGKYDPNNAYLSVHPGAGGTESQDWAQM 144
Query: 226 VLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPF 285
+L+MY WA+R+G+ V +++ PGE AGIK ATI + GEYA+GY K E GVHRLVRISPF
Sbjct: 145 LLRMYMRWAERKGFDVEIVELQPGEEAGIKDATILIKGEYAYGYLKYESGVHRLVRISPF 204
Query: 286 DSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHI 345
D+ +RRHTSFA+V VIP D ++I DL+IE FR+ G GGQ+ N T+SAVRI H+
Sbjct: 205 DAARRRHTSFASVNVIPEI-DDDVDIEIKPEDLKIETFRASGHGGQYVNKTESAVRITHL 263
Query: 346 PTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTY 405
PTGI +CQNERSQHQNK +A+ +L++++ QLE+ ++ + E L DISWGNQIR+Y
Sbjct: 264 PTGIVVSCQNERSQHQNKQTALKILKAKLYQLEMEKKRREIQEIQGELKDISWGNQIRSY 323
Query: 406 VLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
+ HPY MVKD RT E ++ D+V++GD+D FI
Sbjct: 324 IFHPYTMVKDHRTGVETANVDAVMDGDIDMFI 355
>gi|209885116|ref|YP_002288973.1| peptide chain release factor 2 [Oligotropha carboxidovorans OM5]
gi|337741256|ref|YP_004632984.1| peptide chain release factor 2 [Oligotropha carboxidovorans OM5]
gi|386030272|ref|YP_005951047.1| peptide chain release factor 2 [Oligotropha carboxidovorans OM4]
gi|209873312|gb|ACI93108.1| peptide chain release factor 2 [Oligotropha carboxidovorans OM5]
gi|336095340|gb|AEI03166.1| peptide chain release factor 2 [Oligotropha carboxidovorans OM4]
gi|336098920|gb|AEI06743.1| peptide chain release factor 2 [Oligotropha carboxidovorans OM5]
Length = 322
Score = 311 bits (796), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 154/307 (50%), Positives = 216/307 (70%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
+E SL ++ + E+EL + I +I+L END + E+ AL +++ +EL+A
Sbjct: 2 QERTSLENQLGGIGRTERELEDQIGLIELGEAENDAAVVAEAEAALAALKKDVARQELEA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+EV AGAGGTES DWASM+L+MY WA+R+G++V ++E GE AGIK
Sbjct: 62 LLSGEADRFDTYLEVHAGAGGTESQDWASMLLRMYTRWAERKGFKVEFLEETQGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI++ G A+G+ K E GVHRLVRISP+DS RRHTSF+++A+ P D+S + INE
Sbjct: 122 SATIQISGHNAYGWLKTEAGVHRLVRISPYDSNARRHTSFSSIAIFPVV-DNSIKIDINE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD+R++ RSGGAGGQH N T+SAVR+ HIPTG+ CQ RSQH+N+A A +L++R+
Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
++E+ ++ + A + TDI WG+QIR+YVL PY+MVKDLRT + SD VL+GDLD
Sbjct: 241 EIELKKREEQAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLDGDLDE 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMAATLA 307
>gi|190571741|ref|YP_001976099.1| protein chain release factor b [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|190358013|emb|CAQ55482.1| protein chain release factor b [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
Length = 335
Score = 311 bits (796), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 150/333 (45%), Positives = 224/333 (67%), Gaps = 2/333 (0%)
Query: 110 VRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEN 169
+RL L ++ + NLW D A I +E + +++ E + + I +++ A +EN
Sbjct: 1 MRLEELDSQASNDNLWQDNQKAQEILKERSKIKHEIESFSKLESDYNDSISLMRSAIDEN 60
Query: 170 DTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
D E E L+ + + K KE ++L +GE D +C++E+ +GAGGTES DW M+++M
Sbjct: 61 DEEFFSEVKGELVKLEKLIKLKETESLFTGEADNNNCFLEIHSGAGGTESNDWTEMLMRM 120
Query: 230 YKSWAQ-RRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSG 288
Y WA+ ++V +++++ G+ GIK TIK+ GE A+G+AK+E GVHRLVRISPFD+
Sbjct: 121 YTRWAEIYHNFKVEVVEKLDGDAVGIKSTTIKIIGEKAYGWAKSESGVHRLVRISPFDAN 180
Query: 289 KRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTG 348
+RHTSFA+V V P DS + ++E DL+I+ +R+ GAGGQH N T+SAVRI HIPTG
Sbjct: 181 GKRHTSFASVGVTPVIEDS-IDIVVDEKDLKIDTYRASGAGGQHVNKTESAVRITHIPTG 239
Query: 349 ITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLH 408
+ A CQN RSQH+NK A+ +L+ R+ Q+E+ ++ Q AE DI WG+QIR+YV+H
Sbjct: 240 VVAQCQNGRSQHKNKDEALKLLKGRLYQIELEKKEQKMAEEYGKKCDIGWGSQIRSYVMH 299
Query: 409 PYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
PY+MVKDLRT +EV + +SV +G++D FI+S L
Sbjct: 300 PYQMVKDLRTGHEVGNINSVFDGNIDCFIVSVL 332
>gi|350560872|ref|ZP_08929711.1| peptide chain release factor 2 [Thioalkalivibrio thiocyanoxidans
ARh 4]
gi|349780979|gb|EGZ35287.1| peptide chain release factor 2 [Thioalkalivibrio thiocyanoxidans
ARh 4]
Length = 329
Score = 311 bits (796), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 148/328 (45%), Positives = 221/328 (67%), Gaps = 2/328 (0%)
Query: 118 ELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELES 177
EL P +W+DP A + RE L + ++ E +L + D+++LA ++DT
Sbjct: 4 ELEDPAIWNDPERAQALGRERAQLEAVVLNIREIEAQLSDSHDLLELAEADDDTSTVDAV 63
Query: 178 LEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRR 237
L + R+ +E E + SGE+D + ++++QAG+GGTE+ DWA M+L+MY W +RR
Sbjct: 64 ATDLEQLNRRVEELEFRRMFSGEMDSANAFLDIQAGSGGTEAQDWAEMLLRMYLRWGERR 123
Query: 238 GYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAA 297
G+R +++ G++AGIK AT+K DGEYAFG+ + E+GVHRLVR SP+DSG RRHTSFAA
Sbjct: 124 GFRTEIIELSEGDVAGIKSATVKFDGEYAFGWLRTEIGVHRLVRKSPYDSGNRRHTSFAA 183
Query: 298 VAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNER 357
V V P D S ++IN +DL+++ +R+ GAGGQH N T+SA+RI H+P+GI CQN+R
Sbjct: 184 VFVSPEI-DDSIEIEINPADLKVDTYRASGAGGQHVNRTESAIRITHMPSGIVVACQNDR 242
Query: 358 SQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLR 417
SQH+N+ +AM L++++ ++EI ++ ++ +DI WG+QIR+YVL R +KDLR
Sbjct: 243 SQHKNRDTAMKQLKAKLYEMEIQKRNAEKQALEETKSDIGWGSQIRSYVLDQSR-IKDLR 301
Query: 418 TNYEVSDPDSVLEGDLDGFILSYLSASL 445
T EV + SVL+GDLD FI + L + L
Sbjct: 302 TGVEVGNTQSVLDGDLDPFIEASLKSGL 329
>gi|406947899|gb|EKD78745.1| hypothetical protein ACD_41C00281G0010 [uncultured bacterium]
Length = 365
Score = 311 bits (796), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 156/359 (43%), Positives = 232/359 (64%), Gaps = 9/359 (2%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
+ Q I I ++L + ++ L AE+++P+ W +P HA ++ R L ++ +
Sbjct: 4 LLQRITTIGEQLNIAGMRAKVAALEAEMSQPDFWQNPSHAQQVGRVVNDLRKEIATWEQV 63
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
+Q+ +M +L +E D +L E + + R+ E E L + D S + +
Sbjct: 64 QQQATSLQEMAQLNEQERDPDLTKELEQQQKKLERQFAELEFHLLFGKKYDDASAVLAIH 123
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AGAGG ++ DWA M+++M + +R+G+ VT++D G AGIK T++V G YA+GY K
Sbjct: 124 AGAGGVDAQDWAEMLMRMVMRYCERKGFTVTVLDLSRGNEAGIKSVTMEVIGRYAYGYLK 183
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
+E GVHRLVR SPF++ R TSFA + V+P G+ S V+I + D+RI+ +RSGG GGQ
Sbjct: 184 SEHGVHRLVRQSPFNADALRQTSFALIEVLPELGELSP-VEIKDEDIRIDVYRSGGKGGQ 242
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI----ARQAQMNA 387
NTTDSAVRI H+ T I TCQNERSQHQNKA+AM +L+++++QL++ A + ++
Sbjct: 243 GVNTTDSAVRITHLSTNIVVTCQNERSQHQNKATAMKILRAKLHQLQLEAEQAEKLKLRG 302
Query: 388 EHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLD 446
E+T + WGNQIR+YVLHPY+MVKD RT YEVSDPDSVL G+LDGF+ +YL +++D
Sbjct: 303 EYTSA----EWGNQIRSYVLHPYKMVKDHRTEYEVSDPDSVLNGELDGFVEAYLRSTVD 357
>gi|148270343|ref|YP_001244803.1| peptide chain release factor 2 [Thermotoga petrophila RKU-1]
gi|166225119|sp|A5IM04.1|RF2_THEP1 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|147735887|gb|ABQ47227.1| bacterial peptide chain release factor 2 (bRF-2) [Thermotoga
petrophila RKU-1]
Length = 367
Score = 310 bits (795), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 154/329 (46%), Positives = 220/329 (66%), Gaps = 7/329 (2%)
Query: 115 LSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLARE--ENDTE 172
+ +L P++WDD A RE+ + ++K + + + + +++A E + D E
Sbjct: 36 IEKKLTDPSVWDDQKKA----REYTQKLKRLKNISEDLKRVRSLFEDLEVAIELSDEDQE 91
Query: 173 LELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKS 232
+ E + + K+ EL+ +L+G+ DP + Y+ V GAGGTES DWA M+L+MY
Sbjct: 92 MAQHVEEIVQELEGAVKKLELEIILNGKYDPNNAYLSVHPGAGGTESQDWAQMLLRMYMR 151
Query: 233 WAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRH 292
WA+R+G+ V +++ PGE AGIK ATI + GEYA+GY K E GVHRLVRISPFD+ +RRH
Sbjct: 152 WAERKGFDVEIVEFQPGEEAGIKDATILIKGEYAYGYLKHESGVHRLVRISPFDAARRRH 211
Query: 293 TSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITAT 352
TSFA+V VIP D ++I DL+IE FR+ G GGQ+ N T+SAVRI H+PTGI +
Sbjct: 212 TSFASVNVIPEI-DDDVDIEIRPEDLKIETFRASGHGGQYVNKTESAVRITHLPTGIVVS 270
Query: 353 CQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRM 412
CQNERSQHQNK +A+ +L++++ QLE+ ++ + E L DISWGNQIR+YV HPY M
Sbjct: 271 CQNERSQHQNKQTALKILKAKLYQLEMEKKQREIQEIQGELKDISWGNQIRSYVFHPYTM 330
Query: 413 VKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
VKD RT E ++ D+V++GD+D FI + L
Sbjct: 331 VKDHRTGVETANVDAVMDGDIDMFIEAEL 359
>gi|254261824|ref|ZP_04952878.1| peptide chain release factor 2, programmed frameshift [Burkholderia
pseudomallei 1710a]
gi|254220513|gb|EET09897.1| peptide chain release factor 2, programmed frameshift [Burkholderia
pseudomallei 1710a]
Length = 367
Score = 310 bits (795), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 157/335 (46%), Positives = 223/335 (66%), Gaps = 6/335 (1%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++ +L PN+W+D +A + RE SL + + A + +L + + +LA EE D
Sbjct: 35 RLAEVNKQLEDPNVWNDSKNAQALGREKKSLESVVTTLTALDNDLRDAQALFELAHEEGD 94
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
E + + + + + E + S DP +C+I++QAGAGGTE+ DWASM+L+ Y
Sbjct: 95 EETLVATESDAAKLEARVADIEFRRMFSNPADPNNCFIDIQAGAGGTEACDWASMLLRQY 154
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
+ +R+G++ +++E G++AGIK ATIKV GEYA+GY + E G+HRLVR SPFDS
Sbjct: 155 LRYCERKGFKAEVLEESDGDVAGIKNATIKVSGEYAYGYLRTETGIHRLVRKSPFDSSGG 214
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSF++V V P D S V+IN +DLRI+ +R+ GAGGQH N TDSAVRI H+PTGI
Sbjct: 215 RHTSFSSVFVYPEI-DDSIEVEINPADLRIDTYRASGAGGQHINKTDSAVRITHMPTGIV 273
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+N+A AM +L+SR+ + E+ ++ + S TD+ WG+QIR+YVL
Sbjct: 274 VQCQNDRSQHRNRAEAMAMLKSRLFEAELRKRQAEQDKLESSKTDVGWGHQIRSYVLDQS 333
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R VKDLRTN E+S+ +VL+GDLD FI SASL
Sbjct: 334 R-VKDLRTNVEMSNTKAVLDGDLDDFI----SASL 363
>gi|254469263|ref|ZP_05082668.1| peptide chain release factor 2 [Pseudovibrio sp. JE062]
gi|374331814|ref|YP_005081998.1| peptide chain release factor 2 [Pseudovibrio sp. FO-BEG1]
gi|211961098|gb|EEA96293.1| peptide chain release factor 2 [Pseudovibrio sp. JE062]
gi|359344602|gb|AEV37976.1| Peptide chain release factor 2 [Pseudovibrio sp. FO-BEG1]
Length = 322
Score = 310 bits (795), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 155/307 (50%), Positives = 215/307 (70%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + V+ EQ+L+++ ++I++ E+D + E+ AL M + + +L +
Sbjct: 2 RERQQLDDSINGVRKLEQDLVDNQELIEMGEMEDDQSVVDEAEGALKAMLEQVNKLQLQS 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D YIE+ +GAGGTES DWASM+L+MY+ W ++ GY+V LM+ GE AGIK
Sbjct: 62 LLSGEADGNDTYIEINSGAGGTESQDWASMLLRMYRRWGEQHGYKVELMEYNDGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
AT+ V GE A+G+ K E GVHRLVRISP+DS RRHTSFA+V V P D S +++INE
Sbjct: 122 SATLLVKGENAYGWMKTEAGVHRLVRISPYDSNARRHTSFASVWVYP-VIDDSINIEINE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
+D RI+ +R+ GAGGQH NTTDSAVRI H PTGI CQ+ERSQH+N+A+A +L++R+
Sbjct: 181 ADCRIDTYRASGAGGQHVNTTDSAVRITHNPTGIVVQCQSERSQHKNRATAWDMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ R+ + + S TDI WG+QIR+YVL PY++VKDLRT E + P VL+GDLD
Sbjct: 241 EAELQRREEQANKDAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTAPSDVLDGDLDK 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMEATLA 307
>gi|425068761|ref|ZP_18471877.1| peptide chain release factor 2 [Proteus mirabilis WGLW6]
gi|425071703|ref|ZP_18474809.1| peptide chain release factor 2 [Proteus mirabilis WGLW4]
gi|404598561|gb|EKA99031.1| peptide chain release factor 2 [Proteus mirabilis WGLW4]
gi|404598661|gb|EKA99129.1| peptide chain release factor 2 [Proteus mirabilis WGLW6]
Length = 355
Score = 310 bits (795), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 150/335 (44%), Positives = 226/335 (67%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++AEL +P++W++P A + +E SL ++ + EQ L + ++ LA E +D
Sbjct: 23 RLEEVNAELEQPDVWNEPEKAQALGKERSSLEAIVETIDQLEQGLEDVSGLLDLAVEADD 82
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
E E++ L + +K ++ E + SGE D CY+++QAG+GGTE+ DWASM+++MY
Sbjct: 83 EETFNEAVAELEGLNKKLEQLEFRRMFSGEYDSADCYLDLQAGSGGTEAQDWASMLMRMY 142
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA+ RG++ +++E G++AG+K ATIK+ GEYA+G+ + E GVHRLVR SPFDSG R
Sbjct: 143 LRWAESRGFKTEIIEESDGDVAGLKSATIKIIGEYAYGWLRTETGVHRLVRKSPFDSGGR 202
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSF++ V P D + ++IN +DLRI+ +R+ GAGGQH N T+SAVRI H+PTG+
Sbjct: 203 RHTSFSSAFVYPEV-DDNIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHVPTGLV 261
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+NK AM +++++ +LE+ ++ + +DI WG+QIR+YVL
Sbjct: 262 TQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNADKQVMEDNKSDIGWGSQIRSYVLDDS 321
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E + +VL+GDLD FI + L A L
Sbjct: 322 R-IKDLRTGVETRNTQAVLDGDLDKFIEASLKAGL 355
>gi|335048924|ref|ZP_08541936.1| peptide chain release factor 2 [Megasphaera sp. UPII 199-6]
gi|333764707|gb|EGL42093.1| peptide chain release factor 2 [Megasphaera sp. UPII 199-6]
Length = 344
Score = 310 bits (794), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 152/338 (44%), Positives = 222/338 (65%), Gaps = 1/338 (0%)
Query: 115 LSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELE 174
L +++ P+ W+ P A RIS+E +L +++ +A +++ + + ++LA EE DT L
Sbjct: 3 LDIQMSDPDFWNHPDTARRISQEATALKEEVQGHRALMEQVADLREYLELAMEEKDTSLT 62
Query: 175 LESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWA 234
+ + + + +++E+ LLSGE D C+ + AGAGGTE+ DW M+++MY WA
Sbjct: 63 ADIEKQYEALAGEVEKREIRLLLSGEYDRCNAIVTFHAGAGGTEAQDWTQMLIRMYTRWA 122
Query: 235 QRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTS 294
+R GY + LMD PG+ AG+K AT VDGEYA+GY K+E GVHRLVRISPFD+ RRHTS
Sbjct: 123 ERNGYVMRLMDLQPGDEAGVKSATFSVDGEYAYGYLKSEKGVHRLVRISPFDAAARRHTS 182
Query: 295 FAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQ 354
F AV V+P D V+IN ++R++ FR+ GAGGQH N T SAVR+ H+PTGI CQ
Sbjct: 183 FTAVDVMPELPD-DVDVKINMDEVRVDYFRASGAGGQHVNKTSSAVRMTHLPTGIVVQCQ 241
Query: 355 NERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVK 414
NERSQ QNK + L++++ +LE ++AQ+ AE + I WG+QIR+YV HPY +VK
Sbjct: 242 NERSQLQNKEMCLKYLRAKLFELEEEKKAQLKAEIGGTHQAIEWGSQIRSYVFHPYNLVK 301
Query: 415 DLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKDEGGQ 452
D RT+ E + +V++G+LD FI +L ++ GQ
Sbjct: 302 DHRTDVETGNTQAVMDGELDKFIEGFLQREKNRKAAGQ 339
>gi|398353222|ref|YP_006398686.1| peptide chain release factor 2 [Sinorhizobium fredii USDA 257]
gi|390128548|gb|AFL51929.1| peptide chain release factor 2 [Sinorhizobium fredii USDA 257]
Length = 342
Score = 310 bits (794), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 156/321 (48%), Positives = 227/321 (70%), Gaps = 1/321 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
P+LW+D A ++ RE L + ++ FE++L ++I++I+L EE D+ + E+ EAL
Sbjct: 8 PSLWNDAAEAQKLMRERQQLDDSIIGLRRFERQLNDNIELIELGEEEGDSAIVTEAEEAL 67
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
+R ++ +K+++A+LSGE D Y+EV +GAGGTES DWA+M+L+MY WA+R+GY+V
Sbjct: 68 RELRNEAAKKQVEAMLSGEADQNDTYLEVHSGAGGTESQDWANMLLRMYSRWAERQGYKV 127
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
L++ GE AGIK AT+ V G A+G+ K E GVHRLVRISP+DS RRHTSF+++ V
Sbjct: 128 ELLEIQDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFSSIWVY 187
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D S + +NESD RI+ +RS GAGGQH NTTDSAVRI H+P+GI CQ ERSQH+
Sbjct: 188 PVV-DDSIQIDVNESDCRIDTYRSSGAGGQHVNTTDSAVRITHMPSGIVVQCQQERSQHK 246
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
N+A A +L++R+ + E+ ++ + S T+I WG+QIR+YVL PY++VKDLRT E
Sbjct: 247 NRAKAWDMLRARLYEAELKKREEAANAEAASKTEIGWGHQIRSYVLQPYQLVKDLRTGVE 306
Query: 422 VSDPDSVLEGDLDGFILSYLS 442
+ P VL+G+L+ F+ + L+
Sbjct: 307 STSPGDVLDGELNDFMEAALA 327
>gi|99035041|ref|ZP_01314835.1| hypothetical protein Wendoof_01000330 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 336
Score = 310 bits (794), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 150/334 (44%), Positives = 223/334 (66%), Gaps = 2/334 (0%)
Query: 110 VRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEN 169
+RL L ++ + +LW D A + +E + ++ E + + I ++K A +EN
Sbjct: 1 MRLEELDSQASNDDLWQDNQKAQEVLKERSKIKNDVESFLKLESDYNDAISLMKSAIDEN 60
Query: 170 DTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
D E E L + + K KE ++L +GE D +C++E+ +GAGGTES DWA M+++M
Sbjct: 61 DEEFFSEVENELAKLEKLIKYKETESLFTGEADNNNCFLEIHSGAGGTESNDWAEMLMRM 120
Query: 230 YKSWAQ-RRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSG 288
Y WA+ ++V +++++ GE GIK A IK+ GE A+G+AK+E G+HRLVRISPFD+
Sbjct: 121 YIRWAEIYHNFKVEVVEKLEGESVGIKSAMIKIVGEKAYGWAKSESGIHRLVRISPFDAN 180
Query: 289 KRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTG 348
+RHTSFA+V V P DS + ++E DL+I+ +R+ GAGGQH N T+SAVRI HIPTG
Sbjct: 181 GKRHTSFASVGVTPVIEDS-IDIAVDEKDLKIDTYRASGAGGQHVNKTESAVRITHIPTG 239
Query: 349 ITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLH 408
+ CQN RSQH+NK A+ +L+ R+ Q+E+ ++ Q AE DI WGNQIR+YV+H
Sbjct: 240 VVVQCQNGRSQHRNKDEALKLLKGRLYQIELEKKEQKMAEEYGKKCDIGWGNQIRSYVMH 299
Query: 409 PYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
PY+MVKDLRT +EV + +SV +G++D FI+S L+
Sbjct: 300 PYQMVKDLRTGHEVGNINSVFDGNIDCFIVSVLT 333
>gi|297568438|ref|YP_003689782.1| hypothetical protein DaAHT2_0457 [Desulfurivibrio alkaliphilus
AHT2]
gi|296924353|gb|ADH85163.1| conserved hypothetical protein [Desulfurivibrio alkaliphilus AHT2]
Length = 368
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 152/360 (42%), Positives = 229/360 (63%), Gaps = 9/360 (2%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
K A + +Q ++ L N +R+ L PN WD+P A + +E L +
Sbjct: 10 KEKAENLQGRLQTLRSHLDLDNKLLRIQELEHRSAAPNFWDNPEAAAGVQKEQSDLQDTI 69
Query: 146 KE----VKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGEL 201
+ +FE + +++LA END E E E AL ++ ++ EL+ + +GE
Sbjct: 70 DNWQQVIDSFEDAEV----LLELAIAENDHETEQEVSRALNSVEQRLAAMELECMFNGEH 125
Query: 202 DPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKV 261
D + + + AGAGGTE+ DW ++L+MY WA+++G+ ++D +PG+ AG K T+ V
Sbjct: 126 DASNAMLTIHAGAGGTEAQDWTDILLRMYLRWAEKKGFSTEILDHLPGDEAGTKSVTVLV 185
Query: 262 DGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIE 321
G +A+GY ++E+G+HRLVRISPFD+G RRHTSFA+V + P D + V+IN+ DLRI+
Sbjct: 186 KGRWAYGYLRSEMGIHRLVRISPFDTGGRRHTSFASVFIFPEL-DDNIEVEINDKDLRID 244
Query: 322 RFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIAR 381
+R+ GAGGQH N T SA+RI H+P+GI CQNERSQH+NK +AM +L++++ + E A
Sbjct: 245 TYRASGAGGQHVNKTSSAIRITHLPSGIVVQCQNERSQHRNKDTAMKMLKAQLYERERAN 304
Query: 382 QAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
+ + +I+WG+QIR+YVL PYR+VKD RTN+E + D+VL+GDLD FI+SYL
Sbjct: 305 RKEEQQHLHGDKKEIAWGSQIRSYVLQPYRLVKDHRTNHETGNVDNVLDGDLDPFIISYL 364
>gi|114798643|ref|YP_760613.1| peptide chain release factor 2, programmed frameshift, partial
[Hyphomonas neptunium ATCC 15444]
gi|123128746|sp|Q0C0Y0.1|RF2_HYPNA RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|114738817|gb|ABI76942.1| peptide chain release factor 2, programmed frameshift [Hyphomonas
neptunium ATCC 15444]
Length = 368
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 169/359 (47%), Positives = 237/359 (66%), Gaps = 5/359 (1%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
I S ++++RL W RL+ L+A +PN WDDP A + RE L + V+
Sbjct: 12 IESSAALLRRRLDWDTATKRLDELTALSERPNFWDDPQEAQAMMRERQKLADGIALVQTL 71
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
E+++ + ++++LA E D + + L ++ E EL ALLSGE D CY+++
Sbjct: 72 EKDVADAPELMELA--EGDASMLADLEATLRRAAARAAEAELAALLSGEADGNDCYLQIN 129
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AG GGTES DWAS++ +MY WA++RGY V L+DE GE AGIK AT+++ GE A+G+ K
Sbjct: 130 AGEGGTESQDWASILRRMYVRWAEKRGYGVELLDERDGEEAGIKSATLQIKGENAYGWLK 189
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
+E GVHRLVRISPFDS RRHTSF++VAV P D V+IN SD+R + +R+ GAGGQ
Sbjct: 190 SEQGVHRLVRISPFDSSARRHTSFSSVAVSPVI-DDKIDVEINPSDVRTDTYRASGAGGQ 248
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI-ARQAQMNAEHT 390
H N TDSAVR+ HIPT CQ RSQHQN+ A +L+S++ +LE+ R+A +A++
Sbjct: 249 HVNRTDSAVRLTHIPTNTVVQCQAGRSQHQNRDEAWKMLRSKLYELELQKRRAVADAQYA 308
Query: 391 QSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKDE 449
+ I +G+QIR+YVL PY+MVKDLRT E SD VL+GD+D F+ + L+AS+ KD+
Sbjct: 309 DK-SAIGFGHQIRSYVLQPYQMVKDLRTEVETSDTSGVLDGDIDRFLSAALAASVSKDQ 366
>gi|339494817|ref|YP_004715110.1| peptide chain release factor 2 [Pseudomonas stutzeri ATCC 17588 =
LMG 11199]
gi|386021474|ref|YP_005939498.1| peptide chain release factor 2 [Pseudomonas stutzeri DSM 4166]
gi|327481446|gb|AEA84756.1| peptide chain release factor 2 [Pseudomonas stutzeri DSM 4166]
gi|338802189|gb|AEJ06021.1| peptide chain release factor 2 [Pseudomonas stutzeri ATCC 17588 =
LMG 11199]
Length = 370
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 153/335 (45%), Positives = 223/335 (66%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++ EL PN+W+ P +A + RE +L ++ + L + D++++A EEND
Sbjct: 38 RLVEVNRELEDPNVWNKPEYAQSLGRERATLAQIVETIDDLTGSLADSRDLLEMAAEEND 97
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
+ + + +R ++ E + S E+DP +CY+++QAG+GGTE+ DWA+++L+MY
Sbjct: 98 EGAVNDIVAEVERLREILEKLEFRRMFSHEMDPNNCYLDIQAGSGGTEAQDWANILLRMY 157
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA +RG+ +++ GE+AGIK AT+ + GEYAFG+ + E+GVHRLVR SPFDSG R
Sbjct: 158 LRWADKRGFSAEIVELSEGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGAR 217
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSF+AV V P D ++IN +DLRI+ +RS GAGGQH NTTDSAVRI H+PT
Sbjct: 218 RHTSFSAVFVSPEI-DDKVEIEINPADLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTV 276
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQNERSQH NK +AM +L++++ +LE+ ++ + S +DI WG+QIR+YVL
Sbjct: 277 VACQNERSQHANKDTAMKMLRAKLYELEMQKRNAASQALEDSKSDIGWGHQIRSYVLDDS 336
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E SD VL+GDLDG++ + L L
Sbjct: 337 R-IKDLRTGVERSDCQKVLDGDLDGYLEASLKQGL 370
>gi|296127692|ref|YP_003634944.1| hypothetical protein [Brachyspira murdochii DSM 12563]
gi|296019508|gb|ADG72745.1| hypothetical protein Bmur_2678 [Brachyspira murdochii DSM 12563]
Length = 367
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 153/362 (42%), Positives = 232/362 (64%), Gaps = 1/362 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
K+ + I + ++++ L ++ R+ + K + W+D + A ++ +E L+ K+
Sbjct: 7 KNTVSNIKEQSEILRGYLDPDSIYKRVKEIDEISAKDDFWNDNIKAQKLMKERMLLLDKI 66
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
+ V+ + +++++A E ND E+E E + ++R E E L SGE D +
Sbjct: 67 EPVENLIKNSNNIYELVEMAIESNDIEMEKELEGECIELQRVFDELETKNLFSGEFDSKN 126
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
Y+ + AGAGGTES DWASM+ +MY + +R G+ V + DE+PG+ AGIK+ + V G Y
Sbjct: 127 AYLTLNAGAGGTESCDWASMLSRMYVRFCERHGFTVEITDELPGDEAGIKQISFYVQGLY 186
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
A+GY ++E+GVHRLVRISPFD+ +RHTSF AV+V+P+ D V+IN SDLR++ +R+
Sbjct: 187 AYGYLRSEIGVHRLVRISPFDANAKRHTSFVAVSVMPDI-DEDIEVEINPSDLRVDTYRA 245
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQM 385
GAGGQH N T SA+RI HIPT I CQ ERSQH NK AM +L++++ QLE + +
Sbjct: 246 SGAGGQHVNKTSSAIRITHIPTNIVVQCQAERSQHNNKDMAMKMLKAKLYQLEKDKLDKE 305
Query: 386 NAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ TDI+WGNQIR+YV PY+MVKDLRT +E + +SV++G++D FI +YL +
Sbjct: 306 KQKIAGEKTDIAWGNQIRSYVFQPYQMVKDLRTGHETGNMNSVMDGNIDEFISAYLKQQI 365
Query: 446 DK 447
K
Sbjct: 366 KK 367
>gi|328543671|ref|YP_004303780.1| peptide chain release factor 2 [Polymorphum gilvum SL003B-26A1]
gi|326413415|gb|ADZ70478.1| Peptide chain release factor 2 [Polymorphum gilvum SL003B-26A1]
Length = 323
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 158/307 (51%), Positives = 214/307 (69%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + V+ E EL ++I++I+L E D + E+ EAL ++ + + ++ +
Sbjct: 2 RERQQLDEGITGVRRLESELSDNIELIELGDLEGDKSVVNEAEEALRGLKDEVLKLQMAS 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+E+ AGAGGTES DWASM+L+MY+ WA++RGY+V L++ GE AGIK
Sbjct: 62 LLSGEADGNDTYLEINAGAGGTESQDWASMLLRMYRRWAEKRGYKVELLEVHDGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
AT+ + GE A+G+ K E GVHRLVRISP+DS RRHTSFA+ V P D S + INE
Sbjct: 122 SATLLIKGENAYGWLKTESGVHRLVRISPYDSQARRHTSFASAWVYPVV-DDSIEIDINE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD RI+ +R+ GAGGQH NTTDSAVRI HIPTGI CQ+ERSQH+N+A+A +L++R+
Sbjct: 181 SDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGIVVQCQSERSQHKNRATAWAMLKARMY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ ++ + + S T I WG+QIR+YVL PY+MVKDLRT E S PD VL GDLD
Sbjct: 241 EAELQKREEAASAEAASKTSIGWGHQIRSYVLQPYQMVKDLRTGVESSSPDDVLNGDLDP 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMEAALA 307
>gi|219670742|ref|YP_002461177.1| hypothetical protein Dhaf_4746 [Desulfitobacterium hafniense DCB-2]
gi|219541002|gb|ACL22741.1| hypothetical protein Dhaf_4746 [Desulfitobacterium hafniense DCB-2]
Length = 368
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 153/361 (42%), Positives = 230/361 (63%)
Query: 84 DWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
+WK ++ + ++ L ++++L EL +P+ WD+P A ++ +E
Sbjct: 4 EWKKELESLEVRLADLRVSLDVPQREDKISILEIELQRPDFWDNPEGAQKVMQELSYQQE 63
Query: 144 KMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDP 203
K+K +Q+L + + + ++A EE D LE E E +L ++++ EL+ LLSG D
Sbjct: 64 KVKTYYTLQQQLDDMLTLYQMAVEEKDESLEPELEEGILALQQRLDGLELEILLSGPYDR 123
Query: 204 CSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDG 263
+ + + AGAGGTE+ DW SM+ +MY + +R GY+V MD +PG+ AGIK AT+ G
Sbjct: 124 NNAIVTLHAGAGGTEAQDWVSMLYRMYIRYGERHGYKVETMDFLPGDEAGIKSATLSFAG 183
Query: 264 EYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERF 323
E AFGY KAE GVHRLVRISPFD+ RRHTSFA+V VIP + + +QI DL+++ +
Sbjct: 184 ENAFGYLKAEKGVHRLVRISPFDASGRRHTSFASVDVIPEVMEDNAEIQIPPEDLKVDTY 243
Query: 324 RSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQA 383
R+ GAGGQH N T SAVRI H+PTGI Q+ERSQ QN+A + +LQ+++ +L+ +Q
Sbjct: 244 RASGAGGQHVNKTSSAVRITHLPTGIVVQSQSERSQIQNRAYCLRILQAKLLELKRKQQE 303
Query: 384 QMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSA 443
+E +I+WG+QIR+YV HPY MVKD RTN E ++ +V++G++D FI +YL
Sbjct: 304 DEISEIRGEQQEIAWGSQIRSYVFHPYNMVKDHRTNEETANTGAVMDGEIDQFIAAYLQK 363
Query: 444 S 444
+
Sbjct: 364 T 364
>gi|357384585|ref|YP_004899309.1| peptide chain release factor 2 [Pelagibacterium halotolerans B2]
gi|351593222|gb|AEQ51559.1| peptide chain release factor 2 [Pelagibacterium halotolerans B2]
Length = 320
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 156/315 (49%), Positives = 216/315 (68%), Gaps = 3/315 (0%)
Query: 137 EHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDAL 196
E SL + V+ E + +++++I+L E D E+ E+ +AL+ ++ + ++ L
Sbjct: 4 ERQSLESAIDTVRTLEAGINDNVELIELGEAEGDDEIVSEAEKALVELKGTAARMRVETL 63
Query: 197 LSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKR 256
LSGE D CY+EV +GAGGTES DWA M+ +MY WA+RRG++V ++ GE AGIK
Sbjct: 64 LSGEADANDCYVEVHSGAGGTESQDWAQMLFRMYTRWAERRGFKVETIEYSAGEEAGIKG 123
Query: 257 ATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINES 316
ATI V G A+G+ K E GVHRLVRISP+DS RRHTSF++V V P D S + +NES
Sbjct: 124 ATILVKGHNAYGWLKTESGVHRLVRISPYDSQARRHTSFSSVWVYPVI-DDSIDIDVNES 182
Query: 317 DLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQ 376
D+RI+ +R+ GAGGQH NTTDSAVRI HIPTGI CQNERSQH+N+A A +L++R+ +
Sbjct: 183 DVRIDTYRASGAGGQHVNTTDSAVRITHIPTGIVVQCQNERSQHKNRAQAWDMLRARLYE 242
Query: 377 LEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGF 436
LE+ ++ + + S T+I WG+QIR+YVL PY++VKDLRT E + P VL+G LD F
Sbjct: 243 LELQKREEAASAEAASKTEIGWGHQIRSYVLQPYQLVKDLRTQVESTSPSDVLDGALDPF 302
Query: 437 ILSYLSASL--DKDE 449
+ + L+ L DKDE
Sbjct: 303 MEASLAQRLGADKDE 317
>gi|325578209|ref|ZP_08148344.1| peptide chain release factor RF2 [Haemophilus parainfluenzae ATCC
33392]
gi|419844760|ref|ZP_14368047.1| peptide chain release factor 2 [Haemophilus parainfluenzae HK2019]
gi|325159945|gb|EGC72074.1| peptide chain release factor RF2 [Haemophilus parainfluenzae ATCC
33392]
gi|386416686|gb|EIJ31178.1| peptide chain release factor 2 [Haemophilus parainfluenzae HK2019]
Length = 364
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 154/335 (45%), Positives = 223/335 (66%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++AEL +P++W+DP A + +E SL + +K EQ L + +++LA E D
Sbjct: 32 RLEEVNAELEQPDVWNDPEKAQALGKERVSLEQVVDTIKNLEQGLEDVEGLLELAVEAED 91
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
E E++ L + ++ + E + SGE D C CY+++QAG+GGTE+ DW M+L+MY
Sbjct: 92 EETFNEAVAELDELEQQLAKLEFRRMFSGEHDACDCYVDLQAGSGGTEAQDWTEMLLRMY 151
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA+ +G++ LM+ G++AG+K ATI+V GEYAFG+ + E G+HRLVR SPFDS R
Sbjct: 152 LRWAESKGFKTELMEVSDGDVAGLKSATIRVSGEYAFGWLRTETGIHRLVRKSPFDSNNR 211
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSFAAV V P D + ++IN +DLRI+ +R+ GAGGQH N T+SAVRI H+P+GI
Sbjct: 212 RHTSFAAVFVYPEI-DDNIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHMPSGIV 270
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+NK AM L++++ +LE+ ++ + +DI WG+QIR+YVL
Sbjct: 271 VQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDIGWGSQIRSYVLDDA 330
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E + +VL+GDLD FI + L A L
Sbjct: 331 R-IKDLRTGVENRNTQAVLDGDLDRFIEASLKAGL 364
>gi|269958738|ref|YP_003328525.1| peptide chain release factor 2 [Anaplasma centrale str. Israel]
gi|269848567|gb|ACZ49211.1| peptide chain release factor 2 [Anaplasma centrale str. Israel]
Length = 338
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 154/335 (45%), Positives = 225/335 (67%), Gaps = 5/335 (1%)
Query: 115 LSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELE 174
L + + +LWDD +A ++ E + + +A E+E E ++++ +A +E+D+E
Sbjct: 4 LDSRCSSASLWDDQENAKKLLSERARVEEVLASFRALEKEYAECVELLDVA-DESDSEF- 61
Query: 175 LESL-EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSW 233
L+ L AL + R+ +K+ + + SGE D C++ ++ GAGGTES DWA+M+L+MY W
Sbjct: 62 LDGLWSALTQLERRVSQKKAECMFSGEADGSGCFLVIRPGAGGTESNDWAAMLLRMYVRW 121
Query: 234 A-QRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRH 292
A G+ ++D++ GE AG+K T+K+ G A+G+AK E GVHRLVRISPFDS RRH
Sbjct: 122 AGTFHGFTTEIVDKIDGEAAGLKSVTVKISGNGAYGWAKTESGVHRLVRISPFDSSSRRH 181
Query: 293 TSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITAT 352
TSFA+V V P + D ++I E DLRI+ +R+ GAGGQH N T+SAVRI H+P+GI
Sbjct: 182 TSFASVEVSPIA-DDKIDIEILEKDLRIDTYRASGAGGQHVNKTESAVRITHMPSGIVVQ 240
Query: 353 CQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRM 412
CQ RSQHQN+A A +L+SR+ ++E+ + + A+ S DI WG+QIR+YV+HPYRM
Sbjct: 241 CQTSRSQHQNRAEAYSLLRSRLYEMELQEKEKKMAQEHDSRCDIGWGHQIRSYVMHPYRM 300
Query: 413 VKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDK 447
VKDLRT +E D D+VL+GDLD FI + L+ L +
Sbjct: 301 VKDLRTGHETGDVDAVLDGDLDKFIAAALTYKLSQ 335
>gi|160902329|ref|YP_001567910.1| peptide chain release factor 2 [Petrotoga mobilis SJ95]
gi|189040002|sp|A9BHH8.1|RF2_PETMO RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|160359973|gb|ABX31587.1| peptide chain release factor 2 [Petrotoga mobilis SJ95]
Length = 366
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 151/323 (46%), Positives = 215/323 (66%), Gaps = 3/323 (0%)
Query: 115 LSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELE 174
L E+ +PN W+D A +IS+ +L ++ E K E + E ++L+ ++ +
Sbjct: 36 LDKEMMEPNFWNDQNRAKKISKMAQNLKDEIDEFKKLENDFEELEIAVELSEDDPSMTAQ 95
Query: 175 LESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWA 234
+E++ L + +K L LLS E D + ++ + GAGGTES DWASM+L+MY WA
Sbjct: 96 VEAI--LKVIEKKIGSFRLRMLLSEEYDDANAFLSLHPGAGGTESQDWASMLLRMYTRWA 153
Query: 235 QRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTS 294
+ Y + +D G+ AGIK ATIK+ G YA+G K E GVHRLVRISPFD+ RRHTS
Sbjct: 154 DKNNYDIETIDFQEGDEAGIKSATIKISGPYAYGKLKYESGVHRLVRISPFDANGRRHTS 213
Query: 295 FAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQ 354
FA+++V+P D + ++IN DL+I+ +RSGGAGGQH N TDSAVRI H+PTGI Q
Sbjct: 214 FASISVMP-EFDENVEIEINPDDLKIDTYRSGGAGGQHVNKTDSAVRITHLPTGIVVAVQ 272
Query: 355 NERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVK 414
NERSQHQNKA+A+ +L++++ +LE ++ + + DISWGNQIR+YVL+PY +VK
Sbjct: 273 NERSQHQNKATALKILKAKLYELEHQKKLEEKLRLRGEVKDISWGNQIRSYVLYPYTLVK 332
Query: 415 DLRTNYEVSDPDSVLEGDLDGFI 437
DLRT YE S+ +VL+G++D FI
Sbjct: 333 DLRTEYETSNAQAVLDGEIDEFI 355
>gi|222475212|ref|YP_002563628.1| peptide chain release factor 2 [Anaplasma marginale str. Florida]
gi|255003190|ref|ZP_05278154.1| peptide chain release factor 2 (prfB) [Anaplasma marginale str.
Puerto Rico]
gi|222419349|gb|ACM49372.1| peptide chain release factor 2 (prfB) [Anaplasma marginale str.
Florida]
Length = 338
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 154/335 (45%), Positives = 225/335 (67%), Gaps = 5/335 (1%)
Query: 115 LSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELE 174
L + + +LWDD +A ++ E + + +A E+E E ++++ +A +E+D+E
Sbjct: 4 LDSRCSSASLWDDQENAKKLLSERARVEEVLASFRALEKEYAECVELLDVA-DESDSEF- 61
Query: 175 LESL-EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSW 233
L+ L AL + R+ +K+ + + SGE D C++ ++ GAGGTES DWA+M+L+MY W
Sbjct: 62 LDGLWSALTQLERRVSQKKAECMFSGEADGSGCFLVIRPGAGGTESNDWAAMLLRMYIRW 121
Query: 234 A-QRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRH 292
A G+ ++D++ GE AG+K T+K+ G A+G+AK E GVHRLVRISPFDS RRH
Sbjct: 122 AGTFHGFTTEIVDKIDGEAAGLKSVTVKISGNGAYGWAKTESGVHRLVRISPFDSSSRRH 181
Query: 293 TSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITAT 352
TSFA+V V P + D ++I E DLRI+ +R+ GAGGQH N T+SAVRI H+P+GI
Sbjct: 182 TSFASVEVSPIA-DDKIDIEILEKDLRIDTYRASGAGGQHVNKTESAVRITHMPSGIVVQ 240
Query: 353 CQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRM 412
CQ RSQHQN+A A +L+SR+ ++E+ + + A+ S DI WG+QIR+YV+HPYRM
Sbjct: 241 CQTSRSQHQNRAEAYSLLRSRLYEMELQEKEKKMAQEHDSRCDIGWGHQIRSYVMHPYRM 300
Query: 413 VKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDK 447
VKDLRT +E D D+VL+GDLD FI + L+ L +
Sbjct: 301 VKDLRTGHETGDVDAVLDGDLDKFIAAALTYKLSQ 335
>gi|374853598|dbj|BAL56502.1| peptide chain release factor RF-2 [uncultured alpha
proteobacterium]
Length = 336
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 155/306 (50%), Positives = 212/306 (69%), Gaps = 1/306 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L ++ + E++L + ++ +LA +END E E L +++K + EL++
Sbjct: 2 RERSRLSEAVELQRRLERQLDDLRELAELADDENDVETLEEVSRELEALQQKVERLELES 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y++V AGAGGTES DWA M+L+MY WA+ GY V ++E PGE AGIK
Sbjct: 62 LLSGEADRNDAYLQVTAGAGGTESQDWAEMLLRMYVRWAEAHGYEVEWVEETPGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
AT+K+ GE A+G+ K E GVHRLVRISPFDS RRHTSFA+V V P D ++I+
Sbjct: 122 SATVKIKGENAYGWLKTESGVHRLVRISPFDSQGRRHTSFASVWVWPVV-DEDVEIEIDP 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
DLRI+ +R+ GAGGQH N TDSAVRI HIPTGI CQN+RSQH+N+A+AM +L++R+
Sbjct: 181 KDLRIDTYRASGAGGQHVNRTDSAVRITHIPTGIVVQCQNDRSQHRNRATAMAMLKARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+LE+ ++ + + TDI WG+QIR+YVLHPY+MVKDLRT E + +VL+GD+D
Sbjct: 241 ELELQKRRAEQQKLEEQKTDIGWGHQIRSYVLHPYKMVKDLRTGVETGNAQAVLDGDIDR 300
Query: 436 FILSYL 441
F+ + L
Sbjct: 301 FLEAAL 306
>gi|226328243|ref|ZP_03803761.1| hypothetical protein PROPEN_02136 [Proteus penneri ATCC 35198]
gi|225202976|gb|EEG85330.1| peptide chain release factor 2 [Proteus penneri ATCC 35198]
Length = 347
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 148/335 (44%), Positives = 227/335 (67%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++AEL +P++W++P A + +E SL ++ + +Q L + +++LA E +D
Sbjct: 15 RLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVETIDQLDQGLEDVSGLLELAVEADD 74
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
E E++ L + +K ++ E + SGE D CY+++QAG+GGTE+ DWASM+++MY
Sbjct: 75 EETFNEAIAELDVLNKKLEQLEFRRMFSGEYDSADCYLDLQAGSGGTEAQDWASMLMRMY 134
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA+ RG++ +++E G++AG+K ATIK+ GEYA+G+ + E GVHRLVR SPFDSG R
Sbjct: 135 LRWAESRGFKTEIIEESDGDVAGLKSATIKIIGEYAYGWLRTETGVHRLVRKSPFDSGGR 194
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSF++ + P D + ++IN +DLRI+ +R+ GAGGQH N T+SAVRI H+PTG+
Sbjct: 195 RHTSFSSAFIYPEV-DDNIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHVPTGLV 253
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+NK AM +++++ +LE+ ++ + +DI WG+QIR+YVL
Sbjct: 254 TQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNADKQVMEDNKSDIGWGSQIRSYVLDDS 313
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E + +VL+GDLD FI + L A L
Sbjct: 314 R-IKDLRTGVETRNTQAVLDGDLDKFIEASLKAGL 347
>gi|417105946|ref|ZP_11962003.1| peptide chain release factor 2 [Rhizobium etli CNPAF512]
gi|327190272|gb|EGE57372.1| peptide chain release factor 2 [Rhizobium etli CNPAF512]
Length = 342
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 158/321 (49%), Positives = 222/321 (69%), Gaps = 1/321 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
PNLW+D A ++ RE L + VK EQ+L ++I++I+L EE D + E+ + L
Sbjct: 8 PNLWNDAAEAQKLMRERQQLDDGINGVKQLEQQLNDNIELIELGEEEGDLSVVKEAEDTL 67
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
++ ++ ++++A+LSGE D Y+EV +GAGGTES DWA+M+L+MY WA+R+ ++V
Sbjct: 68 KALKAEAARRQVEAMLSGEADGNDTYLEVHSGAGGTESQDWANMLLRMYTRWAERQRFKV 127
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
L++ GE AGIK AT+ V G A+G+ K E GVHRLVRISP+DS RRHTSF+++ V
Sbjct: 128 ELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFSSIWVY 187
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D S ++INESD RI+ +RS GAGGQH NTTDSAVRI HIPTGI CQ ERSQH+
Sbjct: 188 P-VVDDSIQIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQCQQERSQHK 246
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
N+A A +L++R+ + E+ ++ S TDI WG+QIR+YVL PY++VKDLRT
Sbjct: 247 NRAKAWDMLRARMYEAELKKREDAANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVA 306
Query: 422 VSDPDSVLEGDLDGFILSYLS 442
+ PD VL+GDL+ F+ + L+
Sbjct: 307 STAPDDVLDGDLNEFMEAALA 327
>gi|89055024|ref|YP_510475.1| peptide chain release factor 2 [Jannaschia sp. CCS1]
gi|88864573|gb|ABD55450.1| bacterial peptide chain release factor 2 (bRF-2) [Jannaschia sp.
CCS1]
Length = 375
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 166/352 (47%), Positives = 235/352 (66%), Gaps = 4/352 (1%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
I S+ ++ +R+ + RL +A + PNLW+DP A ++ R+ L+ KMK+ +
Sbjct: 12 IRNSLTLLGQRMDIETAPHRLEEFNARVEDPNLWNDPEKAQKLMRDRQVLVDKMKQYETI 71
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
Q + ++ ++I+L E+D E+ E+ AL + ++ KEL+ALL GE D ++E+
Sbjct: 72 RQGVDDNAELIELGEMEDDAEVVAEAEAALTALVDEAAAKELEALLDGEADSNDTFLEIN 131
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
+GAGGTES DWASM+ +MY WA+++GY V L GE AGIK A K+ G A+G+ K
Sbjct: 132 SGAGGTESCDWASMLARMYTRWAEKQGYDVDLQSFSAGEEAGIKSAVYKISGHNAYGWLK 191
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
+E GVHRLVRISPFDS +RHTSF +V V P D + +++N SD+RI+ +RS GAGGQ
Sbjct: 192 SESGVHRLVRISPFDSAAKRHTSFTSVKVYP-VVDDNIEIEVNPSDIRIDTYRSSGAGGQ 250
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI-ARQAQMNAEHT 390
H NTTDSAVRI H PTGI T +E+SQHQN+ AM L+SR+ Q+E+ R A++N H
Sbjct: 251 HVNTTDSAVRITHHPTGIVVTS-SEKSQHQNRDIAMKALKSRLYQMELDKRSAKVNEVH- 308
Query: 391 QSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
++ D WGNQIR+YVL PY+MVKDLRT +E SD VL+G++DG + S L+
Sbjct: 309 ENAGDAGWGNQIRSYVLQPYQMVKDLRTAFETSDTQGVLDGNIDGLMASVLA 360
>gi|256821963|ref|YP_003145926.1| peptide chain release factor 2 [Kangiella koreensis DSM 16069]
gi|256795502|gb|ACV26158.1| bacterial peptide chain release factor 2 (bRF- 2) [Kangiella
koreensis DSM 16069]
Length = 365
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 151/355 (42%), Positives = 238/355 (67%), Gaps = 4/355 (1%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
+++ + ++ L + + RL + EL +P++W+D A + +E L + +K
Sbjct: 14 MSERVTTLRGYLDFDSKQERLVEVERELEQPDVWNDQERAQSLGQERAKLETVVNTIKDL 73
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEK-ELDALLSGELDPCSCYIEV 210
E + ++ ++++L+ EE+D E + +E + S EK E + SGE+D + Y+++
Sbjct: 74 EAGIDDNQELLELSVEEDDAE-SVAEIENEVKQLNTSLEKLEFRRMFSGEMDENNAYLDI 132
Query: 211 QAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYA 270
QAG+GGTE+ DWAS++L+MY W + RG++ + +E G++AGIK ATI+V+GEYA+G+
Sbjct: 133 QAGSGGTEAQDWASILLRMYLRWCESRGFKAEVTEESDGDVAGIKSATIRVEGEYAYGWL 192
Query: 271 KAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGG 330
+ E GVHRLVR SPFDSG RRHTSFA+V V P D S +++N +DLR++ +R+ GAGG
Sbjct: 193 RTETGVHRLVRKSPFDSGNRRHTSFASVFVYPEV-DDSIDIEVNPADLRVDTYRASGAGG 251
Query: 331 QHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHT 390
QH N TDSA+R+ HIPTGI CQN+RSQH+N+A AM ++++++ +LE+ +Q +
Sbjct: 252 QHVNKTDSAIRLTHIPTGIVVQCQNDRSQHKNRAQAMSMMKAKLYELEMQKQREEQQALE 311
Query: 391 QSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ +DI WG+QIR+YVL R +KDLRT +E S+ +VL+GDLD FI + L A +
Sbjct: 312 DTKSDIGWGSQIRSYVLDQSR-IKDLRTGHESSNTTAVLDGDLDSFIEASLKAGV 365
>gi|338730825|ref|YP_004660217.1| peptide chain release factor 2 (bRF-2) [Thermotoga thermarum DSM
5069]
gi|335365176|gb|AEH51121.1| bacterial peptide chain release factor 2 (bRF-2) [Thermotoga
thermarum DSM 5069]
Length = 367
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 152/339 (44%), Positives = 226/339 (66%), Gaps = 3/339 (0%)
Query: 99 IKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEH 158
+K+ ++ + L + + + ++L P++W+D A I ++ +++V ++ +LE
Sbjct: 20 LKQLVEPEKLQMEIQQMESKLASPDIWNDQKSASEIGKKLRRAKKLLEDVTKIDR-ILEE 78
Query: 159 IDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTE 218
I+ I L + D E + + + + K+ +LD +L+ +D + Y+ V GAGGTE
Sbjct: 79 IE-IGLELSDEDPEFVQDVERRVTNLEKIVKQFQLDLILNDPMDQNNAYLSVHPGAGGTE 137
Query: 219 SMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHR 278
S DWA M+L+MY WA+++G+ V L+D PGE AG+K AT+ + GEYA+GY K E GVHR
Sbjct: 138 SHDWAQMLLRMYMRWAEKKGFEVELVDFQPGEEAGVKSATLLIKGEYAYGYLKHERGVHR 197
Query: 279 LVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDS 338
LVRISPFD+ RRHTSFA+V VIP D ++I DL+IE FR+ G GGQ+ N TDS
Sbjct: 198 LVRISPFDAAGRRHTSFASVNVIPELSDD-IEIEIRPEDLKIETFRASGHGGQYVNKTDS 256
Query: 339 AVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISW 398
AVRI HIPTGI +CQ+ERSQHQNKA A+ +L++R+ QLE+ ++ + E L +I+W
Sbjct: 257 AVRITHIPTGIVVSCQSERSQHQNKAQALKMLKARLYQLEMLKRKEKIEELQGELKEIAW 316
Query: 399 GNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
GNQIR+Y+LHPY++VKD RT E D ++VL+G++D FI
Sbjct: 317 GNQIRSYILHPYKLVKDHRTEVETGDAEAVLDGEIDLFI 355
>gi|420243661|ref|ZP_14747558.1| peptide chain release factor 2 [Rhizobium sp. CF080]
gi|398058903|gb|EJL50775.1| peptide chain release factor 2 [Rhizobium sp. CF080]
Length = 342
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 159/321 (49%), Positives = 226/321 (70%), Gaps = 1/321 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
PNLW+D A ++ RE L + VKA EQ+L ++I++I+L EE D + E+ +AL
Sbjct: 8 PNLWNDAAEAQKLMRERQQLDDGINGVKAMEQQLNDNIELIELGEEEGDEGIVKEAEDAL 67
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
++ +S ++++A+LSGE D Y+EV +GAGGTES DWA+M+L+MY WA+R+ ++V
Sbjct: 68 KALKAESGRRQVEAMLSGEADSNDTYVEVHSGAGGTESQDWANMLLRMYTRWAERQRFKV 127
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
L++ GE AGIK ATI V G A+G+ K E GVHRLVRISP+DS RRHTSF+++ V
Sbjct: 128 ELLEVHDGEEAGIKSATILVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFSSIWVY 187
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D S +++INESD RI+ +RS GAGGQH NTTDSAVRI HIP+GI CQ ERSQH+
Sbjct: 188 P-VIDDSINIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPSGIVVQCQQERSQHK 246
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
N+A A +L++R+ + E+ ++ + S +DI WG+QIR+YVL PY++VKDLRT
Sbjct: 247 NRAKAWDMLRARLYEAELKKREEAANAEAASKSDIGWGHQIRSYVLQPYQLVKDLRTGVS 306
Query: 422 VSDPDSVLEGDLDGFILSYLS 442
+ PD VL+G+L+ F+ + L+
Sbjct: 307 STAPDDVLDGELNEFMEAALA 327
>gi|444920070|ref|ZP_21239914.1| Peptide chain release factor 2 [Wohlfahrtiimonas chitiniclastica
SH04]
gi|444508937|gb|ELV09105.1| Peptide chain release factor 2 [Wohlfahrtiimonas chitiniclastica
SH04]
Length = 347
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 145/335 (43%), Positives = 224/335 (66%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL + EL P +W+DP +A ++ +E L G + ++ L + D+++L END
Sbjct: 15 RLTEVLMELESPEIWNDPEYAQKLGKERSQLEGIVYGIRDLTSHLTDAKDLLELCEMEND 74
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
+ + L+ L ++ + E + SGELD + ++++QAGAGGTE+ DWASMV++MY
Sbjct: 75 EDSLVSVLDDLAQFEKEVEALEFRRMFSGELDGANAFLDIQAGAGGTEAQDWASMVMRMY 134
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
W + +G++ +++E PG++AG+K ATIK +G++A+G+ + E G+HRLVR SPFDS +
Sbjct: 135 LRWGEDKGFKTEVLEESPGDVAGLKSATIKFEGDHAYGWLRTETGIHRLVRKSPFDSNNK 194
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSF AV + P D + ++IN +DLRI+ +R+ GAGGQH N T+SAVRI H+PT I
Sbjct: 195 RHTSFCAVFISPEI-DDNVEIEINPADLRIDVYRASGAGGQHVNKTESAVRITHLPTNIV 253
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+NK AM L+S++ + E+ ++ + + S +D+ WG+QIR+YVL
Sbjct: 254 VQCQNDRSQHRNKEVAMNQLRSKLYEFEMQKRREKSDALEDSKSDVGWGSQIRSYVLDQS 313
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT YE+ + +VL+GDLDGFI + L + L
Sbjct: 314 R-IKDLRTGYEMGNTQAVLDGDLDGFIEASLKSGL 347
>gi|237747768|ref|ZP_04578248.1| peptide chain release factor 2 [Oxalobacter formigenes OXCC13]
gi|229379130|gb|EEO29221.1| peptide chain release factor 2 [Oxalobacter formigenes OXCC13]
Length = 349
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 148/331 (44%), Positives = 222/331 (67%), Gaps = 2/331 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
+L ++AEL P++W+DP A + +E SL + + + L + ++ ++A+EE D
Sbjct: 17 KLEQVNAELEDPDVWNDPKKAQDLGKEKKSLENVVLSLTRIKSGLDDAAELFEMAKEEQD 76
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
+ + L + + ++ E + S +DPC+C+I++QAGAGGTE+ DWASM+L+ Y
Sbjct: 77 DDTLKAVDDDTLELLDQIEKLEFRRMFSNPMDPCNCFIDIQAGAGGTEAQDWASMILRQY 136
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
+ +R+G+ T++++ GE+AGIK ATIKV+G+YA+GY + E GVHRLVR SPFDS
Sbjct: 137 LRYCERKGFNATILEQSDGEVAGIKTATIKVEGDYAYGYLRTETGVHRLVRKSPFDSSNG 196
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSF ++ V P D S + IN +D+R++ +R+ GAGGQH N TDSAVR+ H PTGI
Sbjct: 197 RHTSFCSLFVYPEV-DDSIEIDINPADVRVDTYRASGAGGQHINKTDSAVRLTHAPTGIV 255
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+N+A A +L+SR+ +LE+ ++ + S TD+ WG+QIR+YVL
Sbjct: 256 VQCQNDRSQHRNRADAWEMLKSRLFELELRKRMSEQQKLEDSKTDVGWGHQIRSYVLDNS 315
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
R +KDLRTN+E + +VL+GDLD FIL L
Sbjct: 316 R-IKDLRTNHETGNTKAVLDGDLDDFILESL 345
>gi|167646537|ref|YP_001684200.1| peptide chain release factor 2 [Caulobacter sp. K31]
gi|189039999|sp|B0SXB7.1|RF2_CAUSK RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|167348967|gb|ABZ71702.1| peptide chain release factor 2 [Caulobacter sp. K31]
Length = 367
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 156/340 (45%), Positives = 213/340 (62%), Gaps = 1/340 (0%)
Query: 103 LQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMI 162
W +L+ L+A + P LWD P A +SR+ SL ++ V+ E L + ++
Sbjct: 20 FDWDAALRKLDELNARVEDPTLWDRPSEAQAVSRDRASLAARVGAVQELEGGLKDALEYA 79
Query: 163 KLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDW 222
+LA E D L ++ L ++ ++ EL+ALLSGE D CY+E+ +GAGGTES DW
Sbjct: 80 ELADMEGDEALLEDARAQLKDLKDRAGRAELEALLSGEADGNDCYVEINSGAGGTESCDW 139
Query: 223 ASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRI 282
A M+L+MY WA V L++E G+ GIK AT+ V G A+G+ K E GVHRLVRI
Sbjct: 140 AGMLLRMYSRWANAHKMSVELVEETAGDQVGIKSATLLVKGANAYGWLKTEAGVHRLVRI 199
Query: 283 SPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRI 342
SP+D+ +RHTSFA+ V P D + + IN SD+R + +R+ GAGGQH N TDSAVR+
Sbjct: 200 SPYDAAAKRHTSFASAWVYPVV-DDTIEIDINPSDVRTDTYRASGAGGQHINKTDSAVRL 258
Query: 343 IHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQI 402
HIPTGI CQ RSQHQN+ A +L++R+ + E+ R+ TDI WG+QI
Sbjct: 259 THIPTGIAVACQAGRSQHQNREEAWKMLRARLYEAELQRREAAQQALEDQKTDIGWGHQI 318
Query: 403 RTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
R+YVL PY+MVKDLRTN E SD VL+GDLD F+ + L+
Sbjct: 319 RSYVLQPYQMVKDLRTNVETSDTQGVLDGDLDAFMGASLA 358
>gi|71083436|ref|YP_266155.1| peptide chain release factor 2 [Candidatus Pelagibacter ubique
HTCC1062]
gi|71062549|gb|AAZ21552.1| bacterial peptide chain release factor 2 (RF-2) [Candidatus
Pelagibacter ubique HTCC1062]
Length = 284
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 147/281 (52%), Positives = 201/281 (71%), Gaps = 1/281 (0%)
Query: 161 MIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESM 220
M +LA EE + + E LE++ +++ +K+ E LS E D CYIE+ AGAGGTES
Sbjct: 1 MNELALEEKNQSVINEVLESIKNLKKLAKKNETKCFLSNETDSLDCYIEIHAGAGGTESQ 60
Query: 221 DWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLV 280
DWA M+ +MY W+ + ++ L+ E GE AGIK +TIK++G+Y FG+ KAE G+HRLV
Sbjct: 61 DWAEMLRRMYLKWSDIKNFKSELISEHKGEEAGIKSSTIKIEGDYVFGWLKAESGIHRLV 120
Query: 281 RISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAV 340
RISPFDSG RRHTSFA++ + P D + ++INE DLRI+ +RS GAGGQH NTTDSAV
Sbjct: 121 RISPFDSGARRHTSFASIWIYP-VVDENIEIEINEKDLRIDTYRSSGAGGQHVNTTDSAV 179
Query: 341 RIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGN 400
RI H+P+ I CQNERSQH+NK + M +L++R+ E+ ++ Q + S ++I WG+
Sbjct: 180 RITHLPSKIVVQCQNERSQHKNKDTCMNMLKARLYDFELKKKEQESQTVESSKSEIGWGH 239
Query: 401 QIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
QIR+YVLHPYRMVKD RTN+E S+PD VL+G++D F+ S L
Sbjct: 240 QIRSYVLHPYRMVKDNRTNFESSNPDKVLDGEIDDFLESSL 280
>gi|307129433|ref|YP_003881449.1| peptide chain release factor 2 [Dickeya dadantii 3937]
gi|306526962|gb|ADM96892.1| putative peptide chain release factor 2 [Dickeya dadantii 3937]
Length = 365
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 156/360 (43%), Positives = 231/360 (64%), Gaps = 2/360 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
K+ +++ V++ L + RL ++AEL +P++W++P A + +E SL +
Sbjct: 8 KNRIQDLSERTAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEMIV 67
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
+ Q L + +++LA EE+D + +++ L + K + E + SGE D
Sbjct: 68 DTIDQMVQGLDDVSGLLELAVEEDDEDTFNDTVAELDQLESKLGQLEFRRMFSGEYDSAD 127
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
CY+++QAG+GGTE+ DWASM+L+MY WA+ +G++ +++E GE+AGIK ATIK+ GEY
Sbjct: 128 CYLDLQAGSGGTEAQDWASMLLRMYLRWAESKGFKTEIIEESEGEVAGIKSATIKIMGEY 187
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
AFG+ + E GVHRLVR SPFDSG RRHTSF++ V P D ++IN +DLRI+ +R+
Sbjct: 188 AFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEV-DDDIDIEINPADLRIDVYRA 246
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQM 385
GAGGQH N T+SAVRI HIPT I CQN+RSQH+NK AM L++++ + E+ ++
Sbjct: 247 SGAGGQHVNRTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAE 306
Query: 386 NAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ +DI WG+QIR+YVL R +KDLRT E + SVL+GDLD FI + L A L
Sbjct: 307 KQALEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQSVLDGDLDKFIEASLKAGL 365
>gi|345861348|ref|ZP_08813614.1| peptide chain release factor 2 [Desulfosporosinus sp. OT]
gi|344325613|gb|EGW37125.1| peptide chain release factor 2 [Desulfosporosinus sp. OT]
Length = 332
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 154/330 (46%), Positives = 219/330 (66%), Gaps = 1/330 (0%)
Query: 115 LSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELE 174
+ +L +P LWDDP A +I +E K+K E +L E + LA EE+D LE
Sbjct: 1 MERDLQRPGLWDDPDLAQKIMQELAYHQNKVKTYDELEGKLEETETLWLLAIEEDDLSLE 60
Query: 175 LESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWA 234
E + + ++R + + EL+ LLSG+ D + + + AGAGGTE+ DW M+ ++Y W
Sbjct: 61 SEIEQEVRSLRGRFEALELEILLSGQYDRNNAILTLHAGAGGTEAQDWVQMLYRLYIRWG 120
Query: 235 QRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTS 294
+R GY+V +D +PGE AGIK AT+ GE A+GYAK+E GVHRLVRISPFDS RRHTS
Sbjct: 121 ERHGYKVETLDFLPGEEAGIKSATLSFSGENAYGYAKSEKGVHRLVRISPFDSSGRRHTS 180
Query: 295 FAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQ 354
FA+V VIP + + + I+ DLR++ +RSGGAGGQH N TDSA+RI H+P+G+ CQ
Sbjct: 181 FASVDVIPEVTEDN-EITIDTEDLRVDTYRSGGAGGQHVNKTDSAIRITHLPSGVVVQCQ 239
Query: 355 NERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVK 414
+ERSQ QNKA+AM VLQ+++ +L+ Q +E +I+WG+QIR+YV HPY +VK
Sbjct: 240 SERSQIQNKAAAMRVLQAKLLELKRKEQESEISEIRGEQQEIAWGSQIRSYVFHPYSLVK 299
Query: 415 DLRTNYEVSDPDSVLEGDLDGFILSYLSAS 444
D RTN E + +V++G++D FI ++L +
Sbjct: 300 DHRTNVETGNVSAVMDGEIDAFIAAFLQKT 329
>gi|338974709|ref|ZP_08630067.1| peptide chain release factor 2 [Bradyrhizobiaceae bacterium SG-6C]
gi|338232304|gb|EGP07436.1| peptide chain release factor 2 [Bradyrhizobiaceae bacterium SG-6C]
Length = 322
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 153/307 (49%), Positives = 215/307 (70%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
+E SL G++ + E+E+ + I MI+L E D + LE+ AL +++ ++EL+A
Sbjct: 2 QERTSLEGQLTGIGRIEREVEDQIGMIELGEAEKDEGVVLEAENALKGLKKDVAKQELEA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D + Y+EV AGAGGTES DWASM+L+MY WA++ G+++ ++E GE AGIK
Sbjct: 62 LLSGEADKFNTYLEVHAGAGGTESQDWASMLLRMYTRWAEKHGFKIEYLEETEGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI++ G A+G+ K E GVHRLVRISPFDS RRHTSF++VA+ P D S + I E
Sbjct: 122 SATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVAIFPVV-DDSIKIDIKE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
+D+R + RSGGAGGQH N T+SAVR+ HIPTG+ CQ RSQH+N+A A +L++R+
Sbjct: 181 ADVRTDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
++E+ ++ + A + TDI WG+QIR+YVL PY+MVKDLRT + SD VL+GDLD
Sbjct: 241 EIELKKREEKAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTQGVLDGDLDE 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMAATLA 307
>gi|326794289|ref|YP_004312109.1| peptide chain release factor 2 [Marinomonas mediterranea MMB-1]
gi|326545053|gb|ADZ90273.1| Peptide chain release factor 2 [Marinomonas mediterranea MMB-1]
Length = 364
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 157/363 (43%), Positives = 233/363 (64%), Gaps = 20/363 (5%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
+++ Q+++ L + RL +S EL P +W+DP +A ++ +E +L ++ +
Sbjct: 13 LSERSQILRGYLDYDAKKERLEEVSRELEDPEIWNDPEYAQKLGKERSTLEAVVETLDNL 72
Query: 152 EQELLEHIDMIKLAREEND------TELELESLE---ALLTMRRKSKEKELDALLSGELD 202
E + + D++ +A EE+D ELEL L+ A L RR + SGE+D
Sbjct: 73 ESGVEDSKDLLDMAVEEDDADSVEAVELELNDLDEQLAKLEFRR---------MFSGEMD 123
Query: 203 PCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVD 262
S ++++Q+G+GGTE+ DWA+M+L+MY W + +G++V LM+ GE+AGIK AT++ +
Sbjct: 124 ANSAFLDIQSGSGGTEAQDWANMLLRMYLRWGEDKGFKVELMEVSEGEVAGIKSATVRFE 183
Query: 263 GEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIER 322
GEYAFG+ + E GVHRLVR SPFDSG RRHTSFA+V + P D + + IN +DLRI+
Sbjct: 184 GEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFASVFLSPEI-DDNVEIDINPADLRIDT 242
Query: 323 FRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ 382
+RS GAGGQH NTTDSAVRI H+PT CQN+RSQH NK AM L++++ +LE+ ++
Sbjct: 243 YRSSGAGGQHVNTTDSAVRITHVPTNTVVQCQNQRSQHANKDFAMKQLRAKLYELEMLKR 302
Query: 383 AQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
+ + +DI WG+QIR+YVL R +KDLRT E ++ SVL+G LD FI++ L
Sbjct: 303 TEAAQALEDTKSDIGWGSQIRSYVLDSSR-IKDLRTGVESTNTGSVLDGSLDQFIVASLK 361
Query: 443 ASL 445
L
Sbjct: 362 QGL 364
>gi|339499853|ref|YP_004697888.1| peptide chain release factor 2 [Spirochaeta caldaria DSM 7334]
gi|338834202|gb|AEJ19380.1| Peptide chain release factor 2 [Spirochaeta caldaria DSM 7334]
Length = 369
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 154/341 (45%), Positives = 219/341 (64%), Gaps = 2/341 (0%)
Query: 101 KRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHID 160
+RL + ++ L + + + W+DP A ++ E +L + + KA E+ +
Sbjct: 22 RRLDAAGFDEKIRNLEQKTHDADFWNDPSKAEKVMNEIKALKTRYEPWKALVAEIEDLEV 81
Query: 161 MIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESM 220
+ +LA E+D E ++++ +++ L L+SGE+D SC++ V AGAGGTE+
Sbjct: 82 LYQLASAEHDESHAPEIEATFKDIQKRFEKQNLVELMSGEVDQSSCFLTVHAGAGGTEAC 141
Query: 221 DWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLV 280
DWA M+ +MY WA+RRG+ + +D + E GIK T+K++G+YA+GY K E GVHRLV
Sbjct: 142 DWAQMLYRMYLRWAERRGFSIEEVDMLEAE-GGIKSVTVKIEGDYAYGYLKGETGVHRLV 200
Query: 281 RISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAV 340
RISPFD+ RRHTSFA+V V P D S V+I DLRI+ +RSGGAGGQH N TDSAV
Sbjct: 201 RISPFDANARRHTSFASVYVFP-VLDDSIEVEIRPEDLRIDTYRSGGAGGQHVNKTDSAV 259
Query: 341 RIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGN 400
R+ H+PTGI CQNERSQ +NKA+AM +L++R+ + A + + N Q DISWGN
Sbjct: 260 RLTHLPTGIVVACQNERSQIKNKATAMSMLKARLYEYYRAEKEKENERFAQEKKDISWGN 319
Query: 401 QIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
QIR+YV PY +VKD RT EV + +V++GD+D FI YL
Sbjct: 320 QIRSYVFQPYTLVKDARTKVEVGNIQAVMDGDIDVFIEEYL 360
>gi|414167018|ref|ZP_11423248.1| peptide chain release factor 2 [Afipia clevelandensis ATCC 49720]
gi|410892296|gb|EKS40091.1| peptide chain release factor 2 [Afipia clevelandensis ATCC 49720]
Length = 322
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 153/307 (49%), Positives = 215/307 (70%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
+E SL G++ + E+E+ + I MI+L E D + LE+ AL +++ ++EL+A
Sbjct: 2 QERTSLEGQLTGIGRIEREVEDQIGMIELGEAEKDEGVVLEAENALKGLKKDVAKQELEA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D + Y+EV AGAGGTES DWASM+L+MY WA++ G+++ ++E GE AGIK
Sbjct: 62 LLSGEADKFNTYLEVHAGAGGTESQDWASMLLRMYTRWAEKHGFKIEYLEETEGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI++ G A+G+ K E GVHRLVRISPFDS RRHTSF++VA+ P D S + I E
Sbjct: 122 SATIQISGHNAYGWLKTEAGVHRLVRISPFDSSARRHTSFSSVAIFPVV-DDSIKIDIKE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
+D+R + RSGGAGGQH N T+SAVR+ HIPTG+ CQ RSQH+N+A A +L++R+
Sbjct: 181 ADVRTDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
++E+ ++ + A + TDI WG+QIR+YVL PY+MVKDLRT + SD VL+GDLD
Sbjct: 241 EIELKKREEKAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTQGVLDGDLDE 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMAATLA 307
>gi|292492472|ref|YP_003527911.1| hypothetical protein Nhal_2436 [Nitrosococcus halophilus Nc4]
gi|291581067|gb|ADE15524.1| hypothetical protein Nhal_2436 [Nitrosococcus halophilus Nc4]
Length = 365
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 158/365 (43%), Positives = 236/365 (64%), Gaps = 4/365 (1%)
Query: 82 EGDWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSL 141
+G A+ + ++ ++ L + RL + EL P++W++P A R+ +E L
Sbjct: 4 QGAVMQRASNLKGRLEALRGYLDFAAKQERLVEVERELAIPSVWNEPERAQRLGQERAQL 63
Query: 142 MGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGEL 201
+ + A +E+ + ++ +LA EE D + E L TM ++ ++ E + +GE+
Sbjct: 64 QAVVGPLAALGEEIGQIKELFELAVEEGDEDTAREVSAELETMEQRLEKLEFQRMFAGEM 123
Query: 202 DPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKV 261
DP + Y+++QAG+GGTE+ DWA+M+L+MY W ++ G++ L + GE+AGIK ATI+
Sbjct: 124 DPNNAYLDIQAGSGGTEAQDWANMLLRMYLRWGEKHGFKTELTEVSAGEVAGIKSATIRF 183
Query: 262 DGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIE 321
+GEYAFG+ + E GVHRLVR SPFDSG RRHTSFA+V V P D ++IN +DLRI+
Sbjct: 184 EGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFASVFVYPEV-DERIDIEINPADLRID 242
Query: 322 RFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI-A 380
+R+ GAGGQH N TDSAVRI H+P+ I CQ+ERSQHQNKA M L++++ +LE+
Sbjct: 243 TYRAAGAGGQHVNRTDSAVRITHLPSNIVVQCQSERSQHQNKAHGMAQLRAKLYELEMRK 302
Query: 381 RQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSY 440
RQA+ A ++ DI WG+QIR+YVL R +KDLRT E+ + +VL+GDLD FI +
Sbjct: 303 RQAEKQAAE-EAKADIGWGSQIRSYVLDQSR-IKDLRTGVEMGNTQAVLDGDLDLFIEAS 360
Query: 441 LSASL 445
L + L
Sbjct: 361 LKSGL 365
>gi|116251510|ref|YP_767348.1| peptide chain release factor 2 [Rhizobium leguminosarum bv. viciae
3841]
gi|115256158|emb|CAK07239.1| putative peptide chain release factor 2 (rf-2) [Rhizobium
leguminosarum bv. viciae 3841]
Length = 342
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 159/321 (49%), Positives = 223/321 (69%), Gaps = 1/321 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
PNLW+D A ++ RE L + VK EQ+L ++I++I+L EE D + E+ + L
Sbjct: 8 PNLWNDASEAQKLMRERQQLDDGINGVKQLEQQLNDNIELIELGEEEGDQSVVKEAEDTL 67
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
++ ++ ++++A+LSGE D Y+EV +GAGGTES DWA+M+L+MY WA+R+ ++V
Sbjct: 68 KALKAEAARRQVEAMLSGEADGNDTYLEVHSGAGGTESQDWANMLLRMYTRWAERQRFKV 127
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
L++ GE AGIK AT+ V G A+G+ K E GVHRLVRISP+DS RRHTSF+++ V
Sbjct: 128 ELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFSSIWVY 187
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D S ++INESD RI+ +RS GAGGQH NTTDSAVRI HIPTGI CQ ERSQH+
Sbjct: 188 P-VVDDSIQIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQCQQERSQHK 246
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
N+A A +L++R+ + E+ ++ + S T+I WG+QIR+YVL PY+MVKDLRT
Sbjct: 247 NRAKAWDMLRARMYEAELKKREDAASAEAASKTEIGWGHQIRSYVLQPYQMVKDLRTGVA 306
Query: 422 VSDPDSVLEGDLDGFILSYLS 442
S PD VL+GDL+ F+ + L+
Sbjct: 307 SSAPDDVLDGDLNEFMEAALA 327
>gi|414173271|ref|ZP_11428034.1| peptide chain release factor 2 [Afipia broomeae ATCC 49717]
gi|410891923|gb|EKS39719.1| peptide chain release factor 2 [Afipia broomeae ATCC 49717]
Length = 322
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 154/307 (50%), Positives = 213/307 (69%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
+E SL ++ + E+EL + MI+L E D + LE+ AL +++ ++EL+A
Sbjct: 2 QERTSLENQLTGIGKIERELEDQTGMIELGESEKDESVVLEAESALKALKKDVAKQELEA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D + Y+EV AGAGGTES DWASM+L+MY WA++ G++V ++E GE AGIK
Sbjct: 62 LLSGEADRFNTYLEVHAGAGGTESQDWASMLLRMYTRWAEKHGFKVEYLEETEGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI++ G A+G+ K E GVHRLVRISPFDS RRHTSF++VA+ P D S + I E
Sbjct: 122 SATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVAIFPVV-DDSIKIDIKE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD+R + RSGGAGGQH N T+SAVR+ HIPTG+ CQ RSQH+N+A A +L++R+
Sbjct: 181 SDVRTDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
++E+ ++ + A + TDI WG+QIR+YVL PY+MVKDLRT + SD VL+GDLD
Sbjct: 241 EIELKKREEKAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLDGDLDE 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMAATLA 307
>gi|393722184|ref|ZP_10342111.1| peptide chain release factor 2 [Sphingomonas sp. PAMC 26605]
Length = 321
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 160/307 (52%), Positives = 208/307 (67%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + +A + EL + ++I++A E DT +E E + AL + R+++ ++ A
Sbjct: 2 RERRRLDEAITATRAIQSELDDTAELIEMAEAEGDTAMESEGVAALADLARRAESDKIKA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LL+GE D YIEV AGAGGTES DWA M+ +MY W +R G +V L+D+ GE AGIK
Sbjct: 62 LLAGEADGNDTYIEVNAGAGGTESQDWAGMLSRMYSRWGERHGLKVELIDQHSGEQAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
AT+ + GE A+GYAK E GVHRLVRISP+DS RRHTSFA+V V P D + V+ NE
Sbjct: 122 SATLLLKGENAYGYAKTESGVHRLVRISPYDSAARRHTSFASVWVYPVV-DDNIEVEYNE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SDLRI+ +R+ GAGGQH NTTDSAVRI HIPTGI CQN+RSQH+NKA A L++R+
Sbjct: 181 SDLRIDTYRASGAGGQHINTTDSAVRITHIPTGIVVQCQNQRSQHKNKAEAYNQLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+A + TDI WG+QIR+YVL PY+MVKDLRT S P VL+GDL+
Sbjct: 241 ERELAIREAAANAENAGKTDIGWGHQIRSYVLQPYQMVKDLRTGVTSSSPSDVLDGDLEA 300
Query: 436 FILSYLS 442
F+ + LS
Sbjct: 301 FMAAALS 307
>gi|389843547|ref|YP_006345627.1| peptide chain release factor 2 [Mesotoga prima MesG1.Ag.4.2]
gi|387858293|gb|AFK06384.1| peptide chain release factor 2 [Mesotoga prima MesG1.Ag.4.2]
Length = 370
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 154/352 (43%), Positives = 227/352 (64%), Gaps = 5/352 (1%)
Query: 87 SHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMK 146
S + + I+ L + ++ +L + ++ P++W+D A + RE S ++
Sbjct: 8 SRIQELKEKFDSIRATLDLERIDEKLKEIEKRMSDPSIWNDQREASNLGREAQSYRSTIE 67
Query: 147 EVKAFEQELLEHIDM-IKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
++ E+E E I++ ++L+ E+ +E L + + +K +E EL LLSGE D +
Sbjct: 68 LLRDVEEEF-ESIEIAVELSGEDESYVKHVEEL--VRSAEKKVREFELTILLSGEYDINN 124
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
C+I + GAGGTES DWASM+++MY WA+ +++T++DE+PGE AGIK TI + G +
Sbjct: 125 CFISIHPGAGGTESQDWASMLMRMYMRWAEANRFKITIVDELPGEEAGIKSVTINLAGPH 184
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
A+G K E GVHRLVRISPFD+ RRHTSFA+V+V P D ++I DL+I+ +RS
Sbjct: 185 AYGKMKFEAGVHRLVRISPFDANHRRHTSFASVSVFPEM-DEVPEIEIRPEDLKIDTYRS 243
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQM 385
GGAGGQH N TDSAVRI H+PTGI CQ ERSQHQNKA+AM +L +++ ++EI ++
Sbjct: 244 GGAGGQHVNKTDSAVRITHLPTGIVVACQTERSQHQNKANAMKMLYAKLFEIEIEKKRSE 303
Query: 386 NAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
+ +ISWGNQIR+YV PY +VKD RT++E D SV+ G++D FI
Sbjct: 304 KLKLMGDQKEISWGNQIRSYVFQPYTLVKDHRTDFETGDIQSVMNGEIDEFI 355
>gi|254780753|ref|YP_003065166.1| peptide chain release factor 2 [Candidatus Liberibacter asiaticus
str. psy62]
gi|254040430|gb|ACT57226.1| peptide chain release factor 2 [Candidatus Liberibacter asiaticus
str. psy62]
Length = 355
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 156/340 (45%), Positives = 228/340 (67%), Gaps = 1/340 (0%)
Query: 103 LQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMI 162
W N RL+ L+ + P+LW + + A + RE L + +K + L +++ ++
Sbjct: 14 FDWDNAVQRLSFLNTKTEDPHLWQNVIEAKMLMRERQHLDNAISFIKEIQDRLCDNLILL 73
Query: 163 KLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDW 222
+LA EE+D + E+ + L ++ + + K+ ++LLSGE D Y+EV AGAGGTES DW
Sbjct: 74 ELALEEDDCSILQETSDNLQRIKLEVEYKQFESLLSGEADSNDAYLEVHAGAGGTESQDW 133
Query: 223 ASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRI 282
A+M+L+MY WA++R ++ ++ GE AGIK AT+ + G A+G+ K E GVHRLVRI
Sbjct: 134 ANMLLRMYTRWAEKRKFKTEALEIHDGEEAGIKSATLLIKGPNAYGWLKGEQGVHRLVRI 193
Query: 283 SPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRI 342
SP+DS RRHTSF+++ V P D S ++I+ESD RI+ +R+ GAGGQH NTTDSAVRI
Sbjct: 194 SPYDSNSRRHTSFSSIWVYP-VVDDSIEIEISESDCRIDTYRASGAGGQHVNTTDSAVRI 252
Query: 343 IHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQI 402
HIPTG+ CQ ERSQH+NKA A +L++++ +LE+ ++ ++ S T+I WG QI
Sbjct: 253 THIPTGVVVQCQQERSQHKNKAQAWNMLRAKLYELELQKREEIANIGESSKTEIGWGRQI 312
Query: 403 RTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
R+YVL PY+MVKDLRTN E + P VL+GDLD F+ + L+
Sbjct: 313 RSYVLQPYQMVKDLRTNIEKTSPSDVLDGDLDDFMKATLA 352
>gi|218660225|ref|ZP_03516155.1| peptide chain release factor 2 [Rhizobium etli IE4771]
Length = 350
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 158/321 (49%), Positives = 222/321 (69%), Gaps = 1/321 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
PNLW+D A ++ RE L + VK EQ+L ++I++I+L EE D + E+ + L
Sbjct: 8 PNLWNDASEAQKLMRERQQLDDGINGVKQLEQQLNDNIELIELGEEEGDQSVVKEAEDTL 67
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
++ ++ ++++A+LSGE D Y+EV +GAGGTES DWA+M+L+MY WA+R+ ++V
Sbjct: 68 KALKAEAARRQVEAMLSGEADGNDTYLEVHSGAGGTESQDWANMLLRMYTRWAERQRFKV 127
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
L++ GE AGIK AT+ V G A+G+ K E GVHRLVRISP+DS RRHTSF+++ V
Sbjct: 128 ELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFSSIWVY 187
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D S ++INESD RI+ +RS GAGGQH NTTDSAVRI HIPTGI CQ ERSQH+
Sbjct: 188 P-VVDDSIQIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQCQQERSQHK 246
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
N+A A +L++R+ + E+ ++ S TDI WG+QIR+YVL PY++VKDLRT
Sbjct: 247 NRAKAWDMLRARMYEAELKKREDAANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVA 306
Query: 422 VSDPDSVLEGDLDGFILSYLS 442
+ PD VL+GDL+ F+ + L+
Sbjct: 307 STAPDDVLDGDLNEFMEAALA 327
>gi|313672869|ref|YP_004050980.1| peptide chain release factor 2 [Calditerrivibrio nitroreducens DSM
19672]
gi|312939625|gb|ADR18817.1| bacterial peptide chain release factor 2 (bRF-2) [Calditerrivibrio
nitroreducens DSM 19672]
Length = 371
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 155/357 (43%), Positives = 234/357 (65%), Gaps = 18/357 (5%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
+ + + K + ++L +L+ + + + P+ W S+E L+ + +K F
Sbjct: 13 LKEKFKRFKNIVNEEHLKEKLSNIEKQTHDPDFWS--------SKESKHLLKEQSSIKKF 64
Query: 152 EQE------LLEHID-MIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPC 204
+ E +D +++L E + E+E E +++ + EL +L+GE D
Sbjct: 65 LDDWYYLVRRFEDMDVLLELQEEGENVAAEIE--ENFTELKQIVNDFELKLILNGENDIN 122
Query: 205 SCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGE 264
+ + + +GAGGTE+ DWA+M+L+MY WA+ R ++ ++D G+ AGIK AT+ + G
Sbjct: 123 NAILTIHSGAGGTEANDWANMLLRMYIRWAENRKFKYEMLDYQAGDEAGIKSATLNIIGP 182
Query: 265 YAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFR 324
YA+GY K E GVHRLVR+SPFD+ +RHTSFA+V V+P D + INESDL+I+ FR
Sbjct: 183 YAYGYLKGETGVHRLVRLSPFDANNKRHTSFASVFVLPEIEDD-VDIVINESDLKIDTFR 241
Query: 325 SGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQ 384
+GGAGGQH NTTDSAVRI H+PTGI +CQNERSQH+NKA A+ +L+S++ +LE+ ++ +
Sbjct: 242 AGGAGGQHVNTTDSAVRITHLPTGIVVSCQNERSQHKNKAHALKILKSKLYELEMEKKNK 301
Query: 385 MNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
E S T+I++G+QIR+YVLHPY+MVKDLRT +E +PD+VL+G+LD FI SYL
Sbjct: 302 EKNELESSKTEINFGSQIRSYVLHPYKMVKDLRTRHETGNPDAVLDGELDDFIRSYL 358
>gi|91762141|ref|ZP_01264106.1| bacterial peptide chain release factor 2 (RF-2) [Candidatus
Pelagibacter ubique HTCC1002]
gi|91717943|gb|EAS84593.1| bacterial peptide chain release factor 2 (RF-2) [Candidatus
Pelagibacter ubique HTCC1002]
Length = 284
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 146/281 (51%), Positives = 202/281 (71%), Gaps = 1/281 (0%)
Query: 161 MIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESM 220
M +LA EE + + E LE++ +++ +K+ E LS E D +CYIE+ AGAGGTES
Sbjct: 1 MNELALEEKNQSVINEVLESIKNLKKLAKKNETKCFLSNETDSLNCYIEIHAGAGGTESQ 60
Query: 221 DWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLV 280
DWA M+ +MY W+ + ++ L+ E GE AGIK +TIK++G+Y FG+ KAE G+HRLV
Sbjct: 61 DWAEMLRRMYLKWSDIKNFKSELISEHKGEEAGIKSSTIKIEGDYVFGWLKAESGIHRLV 120
Query: 281 RISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAV 340
RISPFDSG RRHTSFA++ + P D + ++INE DLRI+ +RS GAGGQH NTTDSAV
Sbjct: 121 RISPFDSGARRHTSFASIWIYP-VIDENIEIEINEKDLRIDTYRSSGAGGQHVNTTDSAV 179
Query: 341 RIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGN 400
RI H+P+ I CQNERSQH+NK + M +L++R+ E+ ++ Q + S ++I WG+
Sbjct: 180 RITHLPSKIVVQCQNERSQHKNKDTCMNMLKARLYDFELKKKEQESQTVESSKSEIGWGH 239
Query: 401 QIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
QIR+YVLHPYRMVKD RTN+E S+PD +L+G++D F+ S L
Sbjct: 240 QIRSYVLHPYRMVKDNRTNFESSNPDKILDGEIDDFLESSL 280
>gi|319407240|emb|CBI80879.1| peptide chain release factor RF-2 [Bartonella sp. 1-1C]
Length = 333
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 154/319 (48%), Positives = 213/319 (66%), Gaps = 1/319 (0%)
Query: 124 LWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLT 183
LW+D A + RE +L M + F Q L E I++I + EEND E+ E+ +
Sbjct: 2 LWNDARKAQDMMRERQNLEDSMNSTQLFTQTLEECIELIAMGEEENDVEIITEAENTIRQ 61
Query: 184 MRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTL 243
++ + +K++ LLSGE D Y+E+ AGAGGTES DWASM+L+MY WA++ +V +
Sbjct: 62 LKSEIDKKQIATLLSGEADSNDTYLEIHAGAGGTESQDWASMLLRMYTRWAEQHKMKVEV 121
Query: 244 MDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPN 303
++ GE AGIK ATI V G A+G K E GVHRLVRISP+DS RRHTSFA++ V P
Sbjct: 122 LETHDGEEAGIKSATILVKGHNAYGLLKTESGVHRLVRISPYDSNARRHTSFASIWVYP- 180
Query: 304 SGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNK 363
D + + ++E+D+RI+ +R+ GAGGQH NTTDSAVRI HI T I CQ ERSQH+NK
Sbjct: 181 VVDENIEIDLSEADVRIDTYRASGAGGQHVNTTDSAVRITHIKTDIVVQCQTERSQHKNK 240
Query: 364 ASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVS 423
A+A +L++R+ + E+ ++ + S T+I WG+QIR+YVL PY++VKDLRT E +
Sbjct: 241 ATAWSMLRARLYEEELKKREEATNAVEASKTEIGWGHQIRSYVLQPYQLVKDLRTGVENT 300
Query: 424 DPDSVLEGDLDGFILSYLS 442
DP +VL GDLD FI + L+
Sbjct: 301 DPQTVLNGDLDTFIEAALA 319
>gi|431926694|ref|YP_007239728.1| peptide chain release factor 2 (bRF-2) [Pseudomonas stutzeri RCH2]
gi|431824981|gb|AGA86098.1| bacterial peptide chain release factor 2 (bRF-2) [Pseudomonas
stutzeri RCH2]
Length = 364
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 157/347 (45%), Positives = 226/347 (65%), Gaps = 6/347 (1%)
Query: 99 IKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEH 158
I+ L + + RL ++ EL PN+W+ P +A + RE +L ++ + L +
Sbjct: 20 IRGYLDYDQKHDRLVEVNRELEDPNVWNKPEYAQSLGRERATLAQIVETIDDLTGSLADS 79
Query: 159 IDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTE 218
D++ +A EEND + + + +R ++ E + S E+DP +CY+++QAG+GGTE
Sbjct: 80 RDLLDMAAEENDEGAVNDIVAEVERLREILEKLEFRRMFSHEMDPNNCYLDIQAGSGGTE 139
Query: 219 SMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHR 278
+ DWA+++L+MY WA +RG+ +++ GE+AGIK AT+ + GEYAFG+ + E+GVHR
Sbjct: 140 AQDWANILLRMYLRWADKRGFSAEIVELSEGEVAGIKGATVHIKGEYAFGWLRTEIGVHR 199
Query: 279 LVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDS 338
LVR SPFDSG RRHTSF+AV V P D ++IN +DLRI+ +RS GAGGQH NTTDS
Sbjct: 200 LVRKSPFDSGARRHTSFSAVFVSPEI-DDKVEIEINPADLRIDTYRSSGAGGQHVNTTDS 258
Query: 339 AVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISW 398
AVRI H+PT CQNERSQH NK +AM +L++R+ + E+ ++ + + +DI W
Sbjct: 259 AVRITHVPTNTVVACQNERSQHANKDTAMKMLRARLYEQEMQKRNAASQALEDTKSDIGW 318
Query: 399 GNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
G+QIR+YVL R +KDLRT E SD VL+GDLDG YL ASL
Sbjct: 319 GHQIRSYVLDDSR-IKDLRTGVERSDCQKVLDGDLDG----YLEASL 360
>gi|260427583|ref|ZP_05781562.1| peptide chain release factor 2 [Citreicella sp. SE45]
gi|260422075|gb|EEX15326.1| peptide chain release factor 2 [Citreicella sp. SE45]
Length = 397
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 168/352 (47%), Positives = 236/352 (67%), Gaps = 5/352 (1%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
I +S+ ++ +RL W+ RL +A + PNLWDDP A ++ R+ L+ M+ +
Sbjct: 36 IEKSLDLLGQRLDWETAPHRLEEFNARVEDPNLWDDPQAAQKLMRDRQMLVDAMETYSSI 95
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
+QEL +++++I++ E D E+ E+ AL + K+ +KEL+ALL GE D ++E+
Sbjct: 96 KQELSDNVELIEMGEMEEDDEVVSEAEAALRALAEKAGQKELEALLDGEADGNDTFLEIN 155
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AGAGGTE+ DWA+M+ +MY WA++RGY V L E G AG K K+ G A+G+ K
Sbjct: 156 AGAGGTEACDWAAMLQRMYVRWAEKRGYDVELQFEEAGAEAGTKSCGYKISGTNAYGWLK 215
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
+E GVHRLVRISPF G R TSFA+V V P D + + +N SD+RI+ +RS GAGGQ
Sbjct: 216 SESGVHRLVRISPFGKGT-RETSFASVWVYPVV-DDNIEIDVNPSDIRIDTYRSSGAGGQ 273
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI-ARQAQMNAEHT 390
H NTTDSAVRI HIPT I T +E+SQHQN+ AM L+SR+ Q+E+ R A++NA+H
Sbjct: 274 HVNTTDSAVRITHIPTNIVVTS-SEKSQHQNRDIAMKALKSRLYQMELDKRNAEINAQH- 331
Query: 391 QSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
++ D WGNQIR+YVL PY+MVKDLRT++E SD VL+GDLD F+ + L+
Sbjct: 332 EAKGDAGWGNQIRSYVLQPYQMVKDLRTSHETSDTQGVLDGDLDPFMAATLA 383
>gi|13470493|ref|NP_102062.1| peptide chain release factor 2 [Mesorhizobium loti MAFF303099]
gi|14021235|dbj|BAB47848.1| translation releasing factor RF-2 [Mesorhizobium loti MAFF303099]
Length = 340
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 160/329 (48%), Positives = 226/329 (68%), Gaps = 4/329 (1%)
Query: 123 NLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALL 182
+LW++P+ A ++ RE L + VK Q L ++I +I+L EE D + E+ A+
Sbjct: 7 SLWNEPLEAQKLMRERQGLEEGIAAVKGLTQALEDNIGLIELGEEEGDEGVITEAEAAIR 66
Query: 183 TMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVT 242
+M+ ++K ++++ LLSGE D Y+E+ AGAGGTES DWASM+L+MY WA+RR ++V
Sbjct: 67 SMQGEAKARQVETLLSGEADANDTYLEIHAGAGGTESQDWASMLLRMYTRWAERRRFKVE 126
Query: 243 LMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIP 302
+++ GE AGIK AT+ + G A+G+ K E GVHRLVRISP+DS RRHTSFA+V V P
Sbjct: 127 VLEVHDGEEAGIKSATLMIKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFASVWVYP 186
Query: 303 NSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQN 362
D + + ++ESD+RI+ +RS G+GGQH NTTDSAVRI HI TGI CQ ERSQH+N
Sbjct: 187 VI-DDTIEIDVSESDVRIDTYRSSGSGGQHVNTTDSAVRITHIATGIAVACQAERSQHKN 245
Query: 363 KASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEV 422
+A A +L+SR+ + E+ ++ + S +DI WG+QIR+YVL PY++VKDLRT E
Sbjct: 246 RAKAWEMLRSRLYEEELKKREAIANATEASKSDIGWGHQIRSYVLQPYQLVKDLRTGVES 305
Query: 423 SDPDSVLEGDLDGFILSYLSASLDKDEGG 451
+ P SVL+GDLD F+ + LS + EGG
Sbjct: 306 TSPSSVLDGDLDDFMEASLSQRI---EGG 331
>gi|304414309|ref|ZP_07395677.1| peptide chain release factor 2 [Candidatus Regiella insecticola
LSR1]
gi|304283523|gb|EFL91919.1| peptide chain release factor 2 [Candidatus Regiella insecticola
LSR1]
Length = 344
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 151/335 (45%), Positives = 222/335 (66%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL +SAEL +P++W+ P +A ++ +E +L + ++ E++L + ++ LA EEND
Sbjct: 12 RLEEVSAELEQPDVWNKPEYAQQLGKERSTLEAIVLTIQQLERQLADVNGLLDLAVEEND 71
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
E L L + + E + SGE D +CY+++QAG+GGTE+ DWA+M+L+MY
Sbjct: 72 EATFNEVLAELKAVENNLIQLEFRRMFSGEYDSANCYLDLQAGSGGTEAQDWANMLLRMY 131
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA +G++ ++D G++AG+K ATIK+ G+YAFG+ + E GVHRLVR SPFDSG R
Sbjct: 132 LRWADAKGFQTEIIDSSDGDVAGLKSATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGR 191
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSF++ V P D +++IN +DLRI+ +R+ GAGGQH N T+SAVRI HIPT I
Sbjct: 192 RHTSFSSAFVYPEI-DDKVNIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIV 250
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+NK AM L++++ + E+ ++ + +DI WG+QIR+YVL
Sbjct: 251 TQCQNDRSQHKNKDQAMQQLKAKLYEFEMQKKNADKQLQEDNKSDIGWGSQIRSYVLDDA 310
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRTN E + +VL+GDLD FI + L A L
Sbjct: 311 R-IKDLRTNVETRNTQAVLDGDLDKFIEASLKAGL 344
>gi|94309981|ref|YP_583191.1| peptide chain release factor RF-2 [Cupriavidus metallidurans CH34]
gi|93353833|gb|ABF07922.1| peptide chain release factor RF-2 [Cupriavidus metallidurans CH34]
Length = 357
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 159/337 (47%), Positives = 231/337 (68%), Gaps = 6/337 (1%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL+ ++ L P++W++P A + +E +L G ++ + +L ++ +LAREE D
Sbjct: 25 RLDEVNGLLEDPDVWNNPKRAQDLGKEKKALEGVVQVLGKLTDDLNGTDELFELAREEGD 84
Query: 171 TELELESLEALLT-MRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
E LES+EA ++ + E + SGE+D + +I++QAGAGGTE+ DWASM+L+
Sbjct: 85 DET-LESIEADVSGFEALVADMEFRRMFSGEMDQANAFIDIQAGAGGTEACDWASMLLRQ 143
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y + +R+G++ +++E G++AGIK ATIKV+GEYAFGY + E GVHRLVR SPFDS
Sbjct: 144 YLKYCERKGFKAEVLEESEGDVAGIKSATIKVEGEYAFGYLRTETGVHRLVRKSPFDSSG 203
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RHTSF++V V P D S V++N +DLR++ +R+ GAGGQH N TDSAVRI H+PTGI
Sbjct: 204 GRHTSFSSVFVYPEV-DDSFEVEVNPADLRVDTYRASGAGGQHINKTDSAVRITHMPTGI 262
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQS-LTDISWGNQIRTYVLH 408
CQN+RSQH+N+A AM +L+SR+ + E+ R+ Q A+ ++ TD+ WG+QIR+YVL
Sbjct: 263 VVQCQNDRSQHRNRAEAMSMLKSRLYEHEM-RKRQAEADKLEAGKTDVGWGHQIRSYVLD 321
Query: 409 PYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRTN E+S+ VL+GDLD FI + L L
Sbjct: 322 QSR-IKDLRTNVEMSNTQKVLDGDLDPFIEASLKQGL 357
>gi|347757727|ref|YP_004865289.1| peptide chain release factor 2 [Micavibrio aeruginosavorus ARL-13]
gi|347590245|gb|AEP09287.1| peptide chain release factor 2 [Micavibrio aeruginosavorus ARL-13]
Length = 320
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 149/318 (46%), Positives = 219/318 (68%), Gaps = 1/318 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
+E L K++ V+A E + + + +I++ EE D + E+ AL +R ++ ++ +
Sbjct: 2 KERNRLDQKVQSVRAVENSMNDCLGLIEMGEEEGDQSIVDEAEAALKKLRDDAQRMQITS 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D ++EV AG+GGTE+ DW ++L+MY WA++ GYRVTL+ GE AGIK
Sbjct: 62 LLSGEADANDAFLEVHAGSGGTEAQDWGEILLRMYTRWAEQHGYRVTLLQRSDGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATIK++GE A+G+ KAE GVHRLVRISP+DS RRHTSF++VAV P D + +++ +
Sbjct: 122 AATIKIEGENAYGWLKAETGVHRLVRISPYDSNARRHTSFSSVAVSPVI-DDTIEIEVLD 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
DL+++ +RS GAGGQH NTTDSA+RI HIP+GI CQ ERSQH+N+ +AM +L++R+
Sbjct: 181 KDLKVDTYRSSGAGGQHVNTTDSAIRITHIPSGIIVACQAERSQHKNRETAMSMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
++E+ ++ + T+I WG+QIR+YVL PY+MVKDLRT E +D VL+GDLD
Sbjct: 241 EMELKKREDASQASYGEKTEIGWGHQIRSYVLQPYQMVKDLRTEVENTDAFGVLDGDLDR 300
Query: 436 FILSYLSASLDKDEGGQQ 453
F+ + L+ L+ G +Q
Sbjct: 301 FLEASLAHGLEDKSGNKQ 318
>gi|222056175|ref|YP_002538537.1| hypothetical protein Geob_3093 [Geobacter daltonii FRC-32]
gi|221565464|gb|ACM21436.1| hypothetical protein Geob_3093 [Geobacter daltonii FRC-32]
Length = 370
Score = 308 bits (788), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 154/351 (43%), Positives = 220/351 (62%), Gaps = 1/351 (0%)
Query: 91 AIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKA 150
A+A+ I ++ L +L + L + + P WDD A ++ +E + +
Sbjct: 11 AMAERINNLRGSLDIDSLREDIQELESRIAAPGFWDDNEAAQKVLKERTVMEKTLASWDR 70
Query: 151 FEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEV 210
+++ + +I+L E D E + + + + E +LSG D SC+ +
Sbjct: 71 LNRQVEDIRVLIELGSEAEDEATLAEVHDLNDQLEKGLVDAEFQKMLSGPHDASSCFFSI 130
Query: 211 QAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYA 270
+GAGGTES DWA M+L+MY + +R+G++ + D G+ AG+K T V GEYA+GY
Sbjct: 131 NSGAGGTESQDWAEMLLRMYLRYCERKGWKTEITDYQSGDEAGVKGVTFSVSGEYAYGYL 190
Query: 271 KAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGG 330
KAEVG+HRLVRISPFDS RRHTSFA+V V P D V+I E+DLR++ FRS GAGG
Sbjct: 191 KAEVGIHRLVRISPFDSNARRHTSFASVFVFPEIEDD-IDVKIVETDLRVDTFRSSGAGG 249
Query: 331 QHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHT 390
QH NTTDSA+RI HIPTGI CQ ERSQH N+A+AM VL++++ + E+ + AE
Sbjct: 250 QHVNTTDSAIRITHIPTGIVVACQTERSQHMNRATAMRVLRAKLYERELQERESQAAEIA 309
Query: 391 QSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
+I WG+QIR+YVLHPY+MVKDLRT E +PD+VL+G+L+ FI+++L
Sbjct: 310 GEKKEIGWGSQIRSYVLHPYKMVKDLRTGVESGNPDAVLDGELEQFIIAFL 360
>gi|260599230|ref|YP_003211801.1| peptide chain release factor 2 [Cronobacter turicensis z3032]
gi|260218407|emb|CBA33491.1| Peptide chain release factor 2 [Cronobacter turicensis z3032]
Length = 342
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 152/335 (45%), Positives = 222/335 (66%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++AEL +P++W++P A + +E SL ++ + Q L + +++LA E +D
Sbjct: 10 RLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVETLDQMSQGLDDVAGLLELAVEADD 69
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
E E++ L + K + E + SGE D CY+++QAG+GGTE+ DWASM+L+MY
Sbjct: 70 EETFNEAVVELDQLEAKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLLRMY 129
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA+ RG++ +++E GE+AG+K ATIK+ G+YAFG+ + E GVHRLVR SPFDSG R
Sbjct: 130 LRWAEARGFKTEIIEESEGEVAGLKSATIKISGDYAFGWLRTETGVHRLVRKSPFDSGGR 189
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSF++ V P D ++IN +DLRI+ +R+ GAGGQH N T+SAVRI HIPTG
Sbjct: 190 RHTSFSSAFVYPEVED-DIDIEINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTGTV 248
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+NK AM +++++ +LE+ ++ + +DI WG+QIR+YVL
Sbjct: 249 TQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQALEDNKSDIGWGSQIRSYVLDDS 308
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E + +VL+GDLD FI + L A L
Sbjct: 309 R-IKDLRTGVETRNTQAVLDGDLDKFIEASLKAGL 342
>gi|302878965|ref|YP_003847529.1| hypothetical protein Galf_1754 [Gallionella capsiferriformans ES-2]
gi|302581754|gb|ADL55765.1| hypothetical protein Galf_1754 [Gallionella capsiferriformans ES-2]
Length = 367
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 154/347 (44%), Positives = 228/347 (65%), Gaps = 6/347 (1%)
Query: 99 IKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEH 158
+++ L + RL + P +W D A + RE L + + +Q+L +
Sbjct: 23 LRRYLDYDTKQERLTEVCELAEDPAIWQDAKRAQELGRERKMLESVVFGLGKIQQDLTDA 82
Query: 159 IDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTE 218
++ ++++EEND + + + + R+ E E + + +DP SC+I++QAG+GGTE
Sbjct: 83 AELFEMSQEENDEASLMSTAADIDDIERRVAEMEFRRMFNHPMDPNSCFIDIQAGSGGTE 142
Query: 219 SMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHR 278
+ DWASM+++MY +A+R+GY+V +++ G++AGIK A+IK+ GEYAFG+ + E GVHR
Sbjct: 143 AQDWASMLMRMYVRYAERKGYQVEVLEISDGDVAGIKGASIKLIGEYAFGHLRTETGVHR 202
Query: 279 LVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDS 338
LVR SPFDSG RRHTSF++V V P D S ++IN +DLR++ +R+ GAGGQH N TDS
Sbjct: 203 LVRKSPFDSGNRRHTSFSSVFVYPEV-DDSIEIEINPADLRVDTYRASGAGGQHINKTDS 261
Query: 339 AVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISW 398
AVRI HIPT I CQ++RSQH+N+A AM +L+SR+ + E+ ++ + E TDI W
Sbjct: 262 AVRITHIPTNIVVQCQSDRSQHRNRAEAMAMLKSRMYEEELRKRNEEKQEMEDGKTDIGW 321
Query: 399 GNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
G+QIR+YVL R +KDLRTN+EV + VL+GDLD FI SASL
Sbjct: 322 GHQIRSYVLDQSR-IKDLRTNHEVGNTQGVLDGDLDDFI----SASL 363
>gi|251790993|ref|YP_003005714.1| hypothetical protein Dd1591_3423 [Dickeya zeae Ech1591]
gi|247539614|gb|ACT08235.1| hypothetical protein Dd1591_3423 [Dickeya zeae Ech1591]
Length = 365
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 155/360 (43%), Positives = 230/360 (63%), Gaps = 2/360 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
K+ ++ V++ L + RL ++AEL +P++W++P A + +E SL +
Sbjct: 8 KNRIQDLSDRTAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEMIV 67
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
+ Q L + +++LA EE+D + +++ L + K + E + SGE D
Sbjct: 68 DTIDQMVQGLDDVAGLLELAVEEDDEDTFNDTVAELDQLESKLGQLEFRRMFSGEYDSAD 127
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
CY+++QAG+GGTE+ DWASM+L+MY WA+ +G++ +++E GE+AGIK ATIK+ G+Y
Sbjct: 128 CYLDLQAGSGGTEAQDWASMLLRMYLRWAESKGFKTEIIEESEGEVAGIKSATIKIMGDY 187
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
AFG+ + E GVHRLVR SPFDSG RRHTSF++ V P D ++IN +DLRI+ +R+
Sbjct: 188 AFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEV-DDDIDIEINPADLRIDVYRA 246
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQM 385
GAGGQH N T+SAVRI HIPT I CQN+RSQH+NK AM L++++ + E+ ++
Sbjct: 247 SGAGGQHVNRTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAE 306
Query: 386 NAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ +DI WG+QIR+YVL R +KDLRT E + SVL+GDLD FI + L A L
Sbjct: 307 KQAMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQSVLDGDLDKFIEASLKAGL 365
>gi|313201599|ref|YP_004040257.1| peptide chain release factor 1 [Methylovorus sp. MP688]
gi|312440915|gb|ADQ85021.1| peptide chain release factor 1 [Methylovorus sp. MP688]
Length = 347
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 148/327 (45%), Positives = 221/327 (67%), Gaps = 2/327 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL +S L P++W+D + ++ +E L +K + + L + ++ ++AREEND
Sbjct: 15 RLEEVSQLLEDPSIWNDNERSQKLGKERRELEFVVKSLTEVDNSLRDSAELFEMAREEND 74
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
L + ++ +E E + + +D +C+I++Q+G+GGTE+ DWASM+L+MY
Sbjct: 75 DATLLGIDADSKALEKQVEEMEFRRMFANPMDGNNCFIDIQSGSGGTEAQDWASMLLRMY 134
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
+ +RRG++V +++E G++AG+K A++K+ G+YA+GY + E GVHRLVR SPFDSG R
Sbjct: 135 LRYCERRGFKVEVLEESEGDVAGLKSASLKISGDYAYGYLRTESGVHRLVRKSPFDSGNR 194
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSFA+V+V P D S V+IN +DLRI+ +R+ GAGGQH N TDSAVRI H+PT
Sbjct: 195 RHTSFASVSVFPEV-DDSIEVEINPADLRIDTYRASGAGGQHINKTDSAVRITHLPTNTV 253
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+NKA AM +L++++ QLE+ ++ Q + TDI WG+QIR+YVL
Sbjct: 254 VQCQNDRSQHRNKAEAMNMLKAQLYQLELNKRNQEKQALEDAKTDIGWGHQIRSYVLDQS 313
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFI 437
R +KDLRTN E+ + VL+GDLD FI
Sbjct: 314 R-IKDLRTNVEIGNTQGVLDGDLDPFI 339
>gi|146308390|ref|YP_001188855.1| peptide chain release factor 2 [Pseudomonas mendocina ymp]
gi|145576591|gb|ABP86123.1| bacterial peptide chain release factor 2 (bRF-2) [Pseudomonas
mendocina ymp]
Length = 378
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 156/335 (46%), Positives = 223/335 (66%), Gaps = 6/335 (1%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++ EL ++W+ P +A + RE L ++ + L + D++++A EEND
Sbjct: 46 RLVEVNRELEDASVWNKPEYAQALGRERAMLAQIVETIDDLTGSLADSRDLLEMAAEEND 105
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
+ + + +R ++ E + SGE+DP +CY+++QAG+GGTE+ DWA+++L+MY
Sbjct: 106 EGAVNDIVAEVERLREILEKLEFRRMFSGEMDPNNCYLDIQAGSGGTEAQDWANILLRMY 165
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA +RG+ T+++ GE+AGIK AT+ + GEYAFG+ + E+GVHRLVR SPFDSG R
Sbjct: 166 LRWADKRGFDATIIELSEGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGAR 225
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSF+AV V P D ++IN +DLRI+ +RS GAGGQH NTTDSAVRI H+PT
Sbjct: 226 RHTSFSAVFVSPEI-DDKVEIEINPADLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTV 284
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQNERSQH NK +AM +L++++ +LE+ ++ + S +DI WG+QIR+YVL
Sbjct: 285 VACQNERSQHANKDTAMKMLRAKLYELEMQKRNAASQALEDSKSDIGWGHQIRSYVLDDS 344
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E SD VL+GDLDG YL ASL
Sbjct: 345 R-IKDLRTGVERSDCQKVLDGDLDG----YLEASL 374
>gi|227505562|ref|ZP_03935611.1| peptide chain release factor 2 [Corynebacterium striatum ATCC 6940]
gi|227197859|gb|EEI77907.1| peptide chain release factor 2 [Corynebacterium striatum ATCC 6940]
Length = 370
Score = 307 bits (787), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 163/354 (46%), Positives = 229/354 (64%), Gaps = 17/354 (4%)
Query: 90 AAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVK 149
A + ++ I+K + L ++ L A+ P+LWDDP HA +++ + K+++++
Sbjct: 10 AELDSTLATIEKVMDPAALAEQVRELEAQAGDPSLWDDPAHAQQVTSALSAAQAKIRKLE 69
Query: 150 AFEQELLEHIDMIKLAREENDTEL---ELESLEALLTMRRKSKEKELDALLSGELDPCSC 206
+ + + M +LA EE DT L ELE L A + + E+ +LSGE DP
Sbjct: 70 SLRSRVDDMPVMFELAEEEGDTALADDELEDLGAAI------EALEVTTMLSGEYDPREA 123
Query: 207 YIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYA 266
I +++GAGG ++ DWA M+++MY WA++ G++V + D E AGIK AT V GEY
Sbjct: 124 VINIRSGAGGVDAADWAEMLMRMYTRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGEYM 183
Query: 267 FGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSG 326
+G E G HRLVRISPFD+ RR TSFA V V+P + + H+ + + D+R++ +RS
Sbjct: 184 YGQLSVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVV-EQTDHIDVPDGDVRVDVYRSS 242
Query: 327 GAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ---A 383
G GGQ NTTDSAVR+ HIPTGI TCQNE+SQ QNKASAM VLQ+++ LE RQ A
Sbjct: 243 GPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKL--LERKRQEERA 300
Query: 384 QMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
+++A + + SWGNQ+R+YVLHPY+MVKDLRTNYEV DP VL+GDLDGF+
Sbjct: 301 ELDA--LGAGGNASWGNQMRSYVLHPYQMVKDLRTNYEVGDPSKVLDGDLDGFL 352
>gi|300781771|ref|ZP_07091625.1| peptide chain release factor RF2 [Corynebacterium genitalium ATCC
33030]
gi|300533478|gb|EFK54539.1| peptide chain release factor RF2 [Corynebacterium genitalium ATCC
33030]
Length = 364
Score = 307 bits (787), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 164/359 (45%), Positives = 229/359 (63%), Gaps = 11/359 (3%)
Query: 84 DWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
D + ++ Q++ I+K + ++ R L + P+LWDDP HA ++ E S+
Sbjct: 4 DTSNRIQSLEQTLTTIEKVMDLDEMDARARELEQQAADPSLWDDPEHAQSVTTELSSVQA 63
Query: 144 KMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDP 203
+++ V++ Q + + M +LA EE D L + L L T + E+ +LSGE D
Sbjct: 64 RVRRVRSLRQRIDDLPVMYELAAEEGDYTLAEDELADLTT---AVETLEVTTMLSGEYDQ 120
Query: 204 CSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDG 263
+ +++GAGG ++ DWA M+++MY WA++ G++V + D E AGIK AT V G
Sbjct: 121 REAVVNIRSGAGGVDAADWAEMLMRMYIRWAEKNGHKVDVYDISYAEEAGIKSATFVVHG 180
Query: 264 EYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERF 323
EY +G E G HRLVRISPFD+ RR TSFA V V+P + + H+ I +S++RI+ +
Sbjct: 181 EYMYGQLSVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVV-EKTDHIDIPDSEIRIDVY 239
Query: 324 RSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ- 382
RS G GGQ NTTDSAVRI H PTGI TCQNE+SQ QNKASAM VLQS++ LE RQ
Sbjct: 240 RSSGPGGQSVNTTDSAVRITHEPTGIVVTCQNEKSQIQNKASAMNVLQSKL--LERKRQE 297
Query: 383 --AQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILS 439
A+++A + + SWGNQ+R+YVLHPY+MVKDLRTNYEV DP VL+GD+DGF+ S
Sbjct: 298 EKAELDA--LGAGGNASWGNQMRSYVLHPYQMVKDLRTNYEVGDPQKVLDGDIDGFLES 354
>gi|307729220|ref|YP_003906444.1| hypothetical protein [Burkholderia sp. CCGE1003]
gi|307583755|gb|ADN57153.1| hypothetical protein BC1003_1175 [Burkholderia sp. CCGE1003]
Length = 367
Score = 307 bits (787), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 158/374 (42%), Positives = 240/374 (64%), Gaps = 13/374 (3%)
Query: 72 ASQWTILDESEGDWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHA 131
A + ++ S D ++ AA + + L + + + RL ++ EL P++W+D HA
Sbjct: 3 AERLNAIEASLADLRTRAADL-------RGYLDYDDKSRRLIEVNRELEDPDVWNDSKHA 55
Query: 132 GRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEK 191
+ RE L + ++ + + +L + D+ ++AREE D E L + ++ +
Sbjct: 56 QALGREKKLLDDTVGKLTSLDNDLRDTQDLFEMAREEGDDETLLACEADAQALEQRVADM 115
Query: 192 ELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEI 251
E + + DP + ++++QAGAGGTE+ DWASM+L+ Y + +R+G++ ++++ G++
Sbjct: 116 EFRRMFANPADPNNAFLDIQAGAGGTEACDWASMLLRQYLRYCERKGFKTEVLEQTDGDV 175
Query: 252 AGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHV 311
AGIK ATIK++GEYA+G+ + E GVHRLVR SPFDS RHTSF++V V P D S V
Sbjct: 176 AGIKNATIKIEGEYAYGFLRTETGVHRLVRKSPFDSSGGRHTSFSSVFVYPEI-DDSIEV 234
Query: 312 QINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQ 371
IN +DLRI+ +R+ GAGGQH N TDSAVRI H+P+GI CQN+RSQH+N+A AM +L+
Sbjct: 235 DINPADLRIDTYRASGAGGQHINKTDSAVRITHMPSGIVVQCQNDRSQHRNRAEAMAMLK 294
Query: 372 SRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEG 431
SR+ + EI ++ + + TD+ WG+QIR+YVL R +KDLRTN E+S+ SVL+G
Sbjct: 295 SRLYEAEIRKRQEEQDKLEAGKTDVGWGHQIRSYVLDNSR-IKDLRTNVEISNTKSVLDG 353
Query: 432 DLDGFILSYLSASL 445
DLD FI SASL
Sbjct: 354 DLDPFI----SASL 363
>gi|344341314|ref|ZP_08772235.1| Peptide chain release factor 2 [Thiocapsa marina 5811]
gi|343798894|gb|EGV16847.1| Peptide chain release factor 2 [Thiocapsa marina 5811]
Length = 365
Score = 307 bits (787), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 162/361 (44%), Positives = 230/361 (63%), Gaps = 24/361 (6%)
Query: 96 IQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQEL 155
++ ++ L + RL + EL P +W+DP A + RE +L + + L
Sbjct: 18 VESLRGYLDYPERKERLTEVLRELEDPTVWNDPERAQTLGRERATLEAIVLTIDELTTGL 77
Query: 156 LEHIDMIKLAREENDTEL---------ELESLEALLTMRRKSKEKELDALLSGELDPCSC 206
++ D++ +A EE D E + ES A+L RR + +GE+D +
Sbjct: 78 VDADDLLAMAAEEQDEETLDAVAKDLEQQESKVAVLEFRR---------MFAGEMDAKNA 128
Query: 207 YIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYA 266
Y+++QAG+GGTE+ DWA M+L+MY W +RRG++ L++ PGE+AGIK ATI+ G+YA
Sbjct: 129 YVDIQAGSGGTEAQDWAEMLLRMYLRWGERRGFKTELLEVSPGEVAGIKSATIQFSGDYA 188
Query: 267 FGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSG 326
FG+ + E GVHRLVR SPFDSG RRHTSFAAV V P D S +++IN +DLRI+ +R+
Sbjct: 189 FGWLRTETGVHRLVRKSPFDSGNRRHTSFAAVFVSPEV-DDSVNIEINPADLRIDVYRAS 247
Query: 327 GAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIA--RQAQ 384
GAGGQH N T+SAVRI H PTGI CQ +RSQH+NK AM L++++ +LE+ R +Q
Sbjct: 248 GAGGQHVNRTESAVRITHNPTGIVVQCQTDRSQHKNKDHAMKQLKAKLYELEMQNRRASQ 307
Query: 385 MNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSAS 444
E T+S DI WG+QIR+YVL R +KDLRTN E+++ SVL+G+LD FI + L +
Sbjct: 308 QAIEDTKS--DIGWGSQIRSYVLDQSR-IKDLRTNVEIANTQSVLDGNLDPFIEASLKSG 364
Query: 445 L 445
L
Sbjct: 365 L 365
>gi|296134253|ref|YP_003641500.1| hypothetical protein TherJR_2767 [Thermincola potens JR]
gi|296032831|gb|ADG83599.1| hypothetical protein TherJR_2767 [Thermincola potens JR]
Length = 371
Score = 307 bits (787), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 155/367 (42%), Positives = 229/367 (62%), Gaps = 2/367 (0%)
Query: 83 GDWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLM 142
D K +A+ ++ ++ L +N L + + WD+PV A ++ RE L
Sbjct: 3 ADLKRDLIELAERLEELRVSLDIAGKVRAVNALEEKTAEQGFWDNPVEAQKVMREINDLK 62
Query: 143 GKMKEVKAFEQELLEHIDMIKLAREENDT-ELELESLEALLTMRRKSKEKELDALLSGEL 201
+ +++ + + +L E++D E+E E + +R ++ EL LL +
Sbjct: 63 DTIGLYNTLKRQYDDVYTLWELGMEDDDPDEIEKEVARDIRHLRHNVEQAELTLLLGDKY 122
Query: 202 DPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKV 261
D + I + AGAGGTE+ DW M+L+MY WA+ +GY++ +D +PG+ AGIK A+I +
Sbjct: 123 DKGNAIISLHAGAGGTEAQDWVQMLLRMYTRWAEEKGYKIDTLDLLPGDEAGIKSASISI 182
Query: 262 DGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIE 321
+G YA+GY K+E GVHRLVRISPFD+ RRHTSFA+V V+P D T + I+ +DLRI+
Sbjct: 183 EGPYAYGYLKSEKGVHRLVRISPFDASGRRHTSFASVDVLPEV-DDETEIVIDPADLRID 241
Query: 322 RFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIAR 381
FRSGGAGGQH N TDSAVRI HIPTGI CQNERSQH N+ AM +LQ+R+ LEI +
Sbjct: 242 TFRSGGAGGQHVNKTDSAVRITHIPTGIVVQCQNERSQHSNRLKAMKLLQARLLDLEIKK 301
Query: 382 QAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
+ + + +I+WG+QIR+YV HPY +VKD RT E + +V++G++D FI +YL
Sbjct: 302 KEEELNKLRGEQQEIAWGSQIRSYVFHPYSLVKDHRTGVETGNVQAVMDGEIDEFIAAYL 361
Query: 442 SASLDKD 448
+ + +D
Sbjct: 362 KSRIKRD 368
>gi|224824516|ref|ZP_03697623.1| peptide chain release factor 2 [Pseudogulbenkiania ferrooxidans
2002]
gi|224603009|gb|EEG09185.1| peptide chain release factor 2 [Pseudogulbenkiania ferrooxidans
2002]
Length = 349
Score = 307 bits (786), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 146/316 (46%), Positives = 213/316 (67%), Gaps = 2/316 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
P++W+DP A + RE L + + + + D+ +AREEND + L + L
Sbjct: 28 PDVWNDPKRAQDLGRERKQLEDVVLVIDRISGAVNDSRDLFDMAREENDADTILAVQDDL 87
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
K + E + +DP +C++++QAGAGGTE+ DWA M+L+MY +A+R+G+RV
Sbjct: 88 AEAEAKLAQLEFRRMFHDPMDPNNCFLDIQAGAGGTEAQDWAGMLLRMYTRYAERKGFRV 147
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
+++E GE+AGI AT+K+ GEYA+G + EVGVHRLVR+SPFDS RRHTSF++V V
Sbjct: 148 EILEESEGEVAGITSATLKISGEYAYGLLRTEVGVHRLVRVSPFDSNARRHTSFSSVFVY 207
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P DS ++IN +DLR++ +R+ GAGGQH N TDSAVRI H PTGI CQN+RSQH+
Sbjct: 208 PEVDDSFV-IEINPADLRVDTYRASGAGGQHINKTDSAVRITHNPTGIVVQCQNDRSQHR 266
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
N+ AM +L++++ +LE+ ++ + + TD+ WG+QIR+YV R +KDLRT+YE
Sbjct: 267 NRDEAMQMLRAKLYELELKKRNEAKQALEDTKTDVGWGHQIRSYVFDQSR-IKDLRTSYE 325
Query: 422 VSDPDSVLEGDLDGFI 437
V + SV++GDLDGFI
Sbjct: 326 VGNIKSVMDGDLDGFI 341
>gi|426407960|ref|YP_007028059.1| peptide chain release factor 2 [Pseudomonas sp. UW4]
gi|426266177|gb|AFY18254.1| peptide chain release factor 2 [Pseudomonas sp. UW4]
Length = 364
Score = 307 bits (786), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 152/354 (42%), Positives = 229/354 (64%), Gaps = 2/354 (0%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
+++ + I+ + + RL ++ EL P++W+ P +A + RE +L + +
Sbjct: 13 LSERSETIRGIFDYDQKHERLTEVNRELEDPSVWNKPEYAQELGRERAALAQIVDTLDEL 72
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
L + D++ +A EEND + + L + + E + S E+DP + Y+++Q
Sbjct: 73 NTGLADCRDLLDMAVEENDEGAVDDVVAELARLEESLAKLEFRRMFSHEMDPNNAYLDIQ 132
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AG+GGTE+ DWA+++L+MY WA +RG+ T+M+ GE+AGIK AT+ + GEYAFG+ +
Sbjct: 133 AGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLR 192
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
E+GVHRLVR SPFDSG RRHTSF+AV V P D ++IN +DLRI+ +RS GAGGQ
Sbjct: 193 TEIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEI-DDKVEIEINPADLRIDTYRSSGAGGQ 251
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQ 391
H NTTDSAVRI H+PT +CQNERSQH NK +AM +L++++ + E+ ++ +
Sbjct: 252 HVNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRAKLYEQEMQKRNAASQALED 311
Query: 392 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ +DI WG+QIR+YVL R +KDLRTN E SD D VL+GD+D ++ + L + L
Sbjct: 312 TKSDIGWGHQIRSYVLDASR-IKDLRTNIERSDCDKVLDGDIDEYLEASLKSGL 364
>gi|399008378|ref|ZP_10710853.1| peptide chain release factor 2 [Pseudomonas sp. GM17]
gi|398116860|gb|EJM06617.1| peptide chain release factor 2 [Pseudomonas sp. GM17]
Length = 410
Score = 307 bits (786), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 152/335 (45%), Positives = 224/335 (66%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++ EL PN+W+ P +A + RE +L ++ + L + D++++A EEND
Sbjct: 78 RLTEVNRELEDPNVWNKPEYAQELGRERSALAQIVETLDELSGGLADCRDLLEMAVEEND 137
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
+ + L + + E + SGE+D + Y+++QAG+GGTE+ DWA+++L+MY
Sbjct: 138 EGAVGDVVAELTRLDEALAKLEFRRMFSGEMDMNNAYLDIQAGSGGTEAQDWANILLRMY 197
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA +RG+ T+M+ GE+AGIK AT+ + GEYAFG+ + E+GVHRLVR SPFDSG R
Sbjct: 198 LRWASKRGFDATIMELSEGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGAR 257
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSF+AV V P D ++IN +DLRI+ +RS GAGGQH NTTDSAVRI H+PT
Sbjct: 258 RHTSFSAVFVSPEI-DDKVEIEINPADLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTV 316
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
+CQNERSQH NK +AM +L++++ + E+ ++ + + +DI WG+QIR+YVL
Sbjct: 317 VSCQNERSQHANKDTAMKMLRAKLYEQEMQKRNAASQALEDTKSDIGWGHQIRSYVLDAS 376
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRTN E SD D VL+GD+D ++++ L + L
Sbjct: 377 R-IKDLRTNIERSDCDKVLDGDIDEYLVASLKSGL 410
>gi|347736698|ref|ZP_08869272.1| peptide chain release factor 2 PrfB [Azospirillum amazonense Y2]
gi|346919737|gb|EGY01135.1| peptide chain release factor 2 PrfB [Azospirillum amazonense Y2]
Length = 319
Score = 307 bits (786), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 146/307 (47%), Positives = 216/307 (70%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L ++ +A E++L + I++I++ E D E+ ++ + L+ +++++ EL++
Sbjct: 2 REKTQLETAIEGYRALERDLNDGIELIEMGELEGDQEIVTDAEQGLVALQKRAAALELES 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D CY+EV AGAGGTE+ DWA M+L+MY WA++ ++V L+DE GE AGIK
Sbjct: 62 LLSGEADANDCYLEVNAGAGGTEAQDWALMLLRMYSRWAEQHKFKVELLDETNGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
+TI++ G A+G+ K E GVHRLVRISPFDS RRHTSF++V+V P D V+INE
Sbjct: 122 SSTIQIKGHNAYGWLKTESGVHRLVRISPFDSQARRHTSFSSVSVTPVIDDKIV-VEINE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
D+R++ +R+ GAGGQH N TDSAVR+ H+PTGI CQ ERSQH+N++ A +L++R+
Sbjct: 181 KDVRVDTYRASGAGGQHVNKTDSAVRLTHMPTGIVVACQQERSQHKNRSKAWDMLRARIY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
++E+ ++ + A T+I WG+QIR+YVL PY+MVKDLRT E S +VL+GD+D
Sbjct: 241 EMELRKREEAAANLEAQKTEIGWGHQIRSYVLQPYQMVKDLRTGVETSQSGAVLDGDIDE 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FLQAALA 307
>gi|257453984|ref|ZP_05619260.1| peptide chain release factor 2 [Enhydrobacter aerosaccus SK60]
gi|257448649|gb|EEV23616.1| peptide chain release factor 2 [Enhydrobacter aerosaccus SK60]
Length = 349
Score = 307 bits (786), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 156/335 (46%), Positives = 217/335 (64%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++ EL P LW+DP A +IS+E L + + A + +L + MI LA E +D
Sbjct: 17 RLEEVNLELENPELWNDPERATKISKEKSQLDNVIGVITALDDKLEDAKAMIDLAVEADD 76
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
L + L K + E + SGE+D +CY+++Q+G+GGTE+ DWA M+L+MY
Sbjct: 77 ATLLADVQAELDEAEAKVADLEFKRMFSGEMDGNNCYVDIQSGSGGTEAQDWAEMLLRMY 136
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
W + G++ +M+ G +AGIK A+I V G+YAFG+ + E+GVHRLVR SPFDS
Sbjct: 137 LRWCESHGFKAEIMELSAGGVAGIKSASIHVKGDYAFGWLRTEIGVHRLVRKSPFDSNNG 196
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSFAAV V P D + + IN +DLRI+ +RS GAGGQH NTTDSAVRI H PTGI
Sbjct: 197 RHTSFAAVFVSPEI-DDNIEIDINPADLRIDTYRSSGAGGQHVNTTDSAVRITHQPTGIV 255
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQNERSQH NK +AM +L++++ + E+ ++ + ++ +DI WG+QIR+YVL
Sbjct: 256 VACQNERSQHANKDTAMKMLRAKLYEREMMQRMEKQQALEETKSDIGWGSQIRSYVLDDS 315
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E S+ +VL+GDLD FI + L A L
Sbjct: 316 R-IKDLRTGVETSNTQAVLDGDLDKFIEASLKAGL 349
>gi|237751447|ref|ZP_04581927.1| peptide chain release factor 2 [Helicobacter bilis ATCC 43879]
gi|229372813|gb|EEO23204.1| peptide chain release factor 2 [Helicobacter bilis ATCC 43879]
Length = 367
Score = 307 bits (786), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 165/353 (46%), Positives = 233/353 (66%), Gaps = 19/353 (5%)
Query: 97 QVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGS---LMGKMKEVKAFEQ 153
Q I K L +L RL+ ++A + W+D AG I++E ++ E+KA
Sbjct: 18 QNIAKILNPDSLQKRLDEINALESHQEFWNDAKKAGEITKEKRKCERILSTYTEMKA--- 74
Query: 154 ELLEHIDMIKLAREENDT---ELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEV 210
EL + ++ ++A E D+ EL E++E+L + +K E++ +LSGE D + I +
Sbjct: 75 ELDDARELFEIAESEGDSSTLELLFENVESLQSHIQKV---EIEVMLSGEFDSTNAIITI 131
Query: 211 QAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYA 270
Q GAGGTES DWASM+ +MY W++RRG++V L+D GE AGIK A + GE A+GYA
Sbjct: 132 QPGAGGTESQDWASMLYRMYLRWSERRGFKVELLDYQDGEEAGIKGAAFIIKGENAYGYA 191
Query: 271 KAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGG 330
K+E GVHRLVRISPFD+ +RHTSFA+V V P + ++I + D+RI+ +R+ GAGG
Sbjct: 192 KSENGVHRLVRISPFDANAKRHTSFASVQVSPELSE-DIDIEILDKDIRIDTYRASGAGG 250
Query: 331 QHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQ--MNAE 388
QH N T+SA+RI H PTGI CQN+RSQH+NKA+AM +LQS++ +LE +Q++ NAE
Sbjct: 251 QHVNKTESAIRITHFPTGIVVQCQNDRSQHKNKATAMKMLQSKLYELERLKQSEGVANAE 310
Query: 389 HTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
++ I WG+QIR+YVL PY+ VKDLR+NY SD D VL+GD+D I S L
Sbjct: 311 KSE----IGWGHQIRSYVLAPYQQVKDLRSNYATSDTDGVLDGDIDDLIESVL 359
>gi|121535512|ref|ZP_01667321.1| peptide chain release factor 2 [Thermosinus carboxydivorans Nor1]
gi|121305931|gb|EAX46864.1| peptide chain release factor 2 [Thermosinus carboxydivorans Nor1]
Length = 332
Score = 307 bits (786), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 152/324 (46%), Positives = 215/324 (66%), Gaps = 1/324 (0%)
Query: 118 ELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELES 177
+++ P+ WDDP A +I++E +L + + + + + +L +E D + E
Sbjct: 4 KMSAPDFWDDPAEAQKIAQEVTALKDSISQYQQLRSRHSDVAALWQLGMDEGDDSVYDEV 63
Query: 178 LEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRR 237
L + + ++ EL LL+GE D + + + AGAGGTE+ DWA M+L+MY WA++R
Sbjct: 64 AAELRALAKDLEQLELTVLLTGEYDANNAILTLHAGAGGTEAQDWAQMLLRMYMRWAEKR 123
Query: 238 GYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAA 297
GY+V L+D + GE AGIK ATI V G A+GY KAE GVHRLVRISPFD+ RRHTSFAA
Sbjct: 124 GYKVELLDALAGEEAGIKSATITVAGRNAYGYLKAEKGVHRLVRISPFDASGRRHTSFAA 183
Query: 298 VAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNER 357
V V+P D +T + IN +DL+I+ FRSGGAGGQH N T+SAVRI H+PTGI CQ+ER
Sbjct: 184 VDVMPEI-DDNTEIVINPADLKIDTFRSGGAGGQHVNKTESAVRITHLPTGIVVQCQSER 242
Query: 358 SQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLR 417
SQ QN+ AM +L++++ +LE ++ Q +E I WG+QIR+YV HPY +VKD R
Sbjct: 243 SQIQNREQAMRLLRAKLFELERQKREQKKSELAGDYQAIEWGSQIRSYVFHPYNLVKDHR 302
Query: 418 TNYEVSDPDSVLEGDLDGFILSYL 441
TN E + +V++G++D FI +YL
Sbjct: 303 TNAETGNVQAVMDGEIDLFIEAYL 326
>gi|374997883|ref|YP_004973382.1| peptide chain release factor 2 [Desulfosporosinus orientis DSM 765]
gi|357216249|gb|AET70867.1| peptide chain release factor 2 [Desulfosporosinus orientis DSM 765]
Length = 367
Score = 307 bits (786), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 166/364 (45%), Positives = 239/364 (65%), Gaps = 7/364 (1%)
Query: 84 DWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
DWK + S+ ++ L N +++ L E ++P+LWDDP +A +I +E
Sbjct: 4 DWKKELETLTLSLADLRVSLDVANRIEKISALETEFHRPDLWDDPENAQKIMQELALHQN 63
Query: 144 KMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDP 203
K+K + E+EL E + +LA EE+D LE + + + + ++ + EL+ LLSG+ D
Sbjct: 64 KVKLFQELEEELEETATLWQLAMEEDDVSLEGDVAQGVKALYQRFEALELELLLSGQYDR 123
Query: 204 CSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDG 263
+ + + AGAGGTE+ DW M+ ++Y W +R GY+V +D +PGE AGIK AT+ G
Sbjct: 124 NNAILTLHAGAGGTEAQDWVQMLYRLYVRWGERHGYKVETLDFLPGEEAGIKSATLSFSG 183
Query: 264 EYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERF 323
E A+GYAK+E GVHRLVRISPFD+ RRHTSFA+V VIP + + + I+ DLRI+ +
Sbjct: 184 ENAYGYAKSEKGVHRLVRISPFDASGRRHTSFASVDVIPEVTEDN-EITIDTEDLRIDTY 242
Query: 324 RSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQA 383
RSGGAGGQH N TDSA+RI H+PTGI CQ+ERSQ QNK +AM VLQ+++ LE+ R+
Sbjct: 243 RSGGAGGQHVNKTDSAIRITHLPTGIVVQCQSERSQTQNKLAAMRVLQAKL--LELKRKE 300
Query: 384 QMNAEHTQ---SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSY 440
Q AE T+ +I+WG+QIR+YV HPY +VKD RTN E + +V++G++D FI +Y
Sbjct: 301 Q-EAEITEIRGEQQEIAWGSQIRSYVFHPYSLVKDHRTNVETGNVSAVMDGEIDEFIAAY 359
Query: 441 LSAS 444
L +
Sbjct: 360 LQKT 363
>gi|271499213|ref|YP_003332238.1| hypothetical protein Dd586_0640 [Dickeya dadantii Ech586]
gi|270342768|gb|ACZ75533.1| hypothetical protein Dd586_0640 [Dickeya dadantii Ech586]
Length = 365
Score = 307 bits (786), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 156/360 (43%), Positives = 229/360 (63%), Gaps = 2/360 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
K+ ++ V++ L + RL ++AEL +P++W++P A + +E SL +
Sbjct: 8 KNRIQDLSDRTAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEMIV 67
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
+ Q L + +++LA E +D E E++ L + K + E + SGE D
Sbjct: 68 DTIDQMVQGLDDVAGLLELAVEADDEETFNEAIAELDLLEDKLGQLEFRRMFSGEYDSAD 127
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
CY+++QAG+GGTE+ DWASM+L+MY WA+ +G++ +++E GE+AGIK ATIK+ G+Y
Sbjct: 128 CYLDLQAGSGGTEAQDWASMLLRMYLRWAESKGFKTEIIEESEGEVAGIKSATIKIMGDY 187
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
AFG+ + E GVHRLVR SPFDSG RRHTSF++ V P D ++IN +DLRI+ +R+
Sbjct: 188 AFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEV-DDDIDIEINPADLRIDVYRA 246
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQM 385
GAGGQH N T+SAVRI HIPT I CQN+RSQH+NK AM L++++ + E+ ++
Sbjct: 247 SGAGGQHVNRTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAE 306
Query: 386 NAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ +DI WG+QIR+YVL R +KDLRT E + SVL+GDLD FI + L A L
Sbjct: 307 KQALEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQSVLDGDLDKFIEASLKAGL 365
>gi|338740013|ref|YP_004676975.1| peptide chain release factor 2 [Hyphomicrobium sp. MC1]
gi|337760576|emb|CCB66409.1| peptide chain release factor RF-2 [Hyphomicrobium sp. MC1]
Length = 323
Score = 307 bits (786), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 153/307 (49%), Positives = 210/307 (68%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
R+ SL + E K +++ + + +I+L END E AL + +++ + +DA
Sbjct: 2 RQRNSLERSVSEFKRLQRDYEDALTLIELGEAENDEASVSEGETALERIDHEAQRRSIDA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
+LSGE D + YIEV AGAGGTES DWASM+ +MY WA+RRGY+V L+DE PGE AGIK
Sbjct: 62 MLSGEADAMNTYIEVHAGAGGTESQDWASMLARMYVRWAERRGYKVKLIDESPGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
AT +++GE A+G+ K E GVHRLVRISP+DS RRHTSFA+V V P D + V IN
Sbjct: 122 SATYEIEGENAYGWLKTEAGVHRLVRISPYDSNARRHTSFASVTVYPVI-DDTIDVDINP 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
+D+ I RS GAGGQH N T+SAVR++H P+GI Q +RSQHQNK A L++R+
Sbjct: 181 ADVDISYARSSGAGGQHVNRTESAVRLVHKPSGIVIFAQEQRSQHQNKDIAFKRLKARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
++E+ R+ + + + TDI WG+QIR+YVL PY++VKDLRT + ++PD VL+GD+D
Sbjct: 241 EMELKRREEKASAEQAAKTDIGWGHQIRSYVLQPYQLVKDLRTGAQSTNPDEVLDGDIDQ 300
Query: 436 FILSYLS 442
FI + LS
Sbjct: 301 FIEAALS 307
>gi|399116847|emb|CCG19658.1| peptide chain release factor 2 [Taylorella asinigenitalis 14/45]
Length = 327
Score = 307 bits (786), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 157/334 (47%), Positives = 221/334 (66%), Gaps = 22/334 (6%)
Query: 118 ELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLARE---------- 167
EL PN+W+DP A +S+E SL + + EQ + + D+ +LA E
Sbjct: 2 ELEDPNIWNDPEKAQSLSKEKKSLEDVVLVLSELEQCIRDSKDLYELAVEDSDDSTLIAI 61
Query: 168 ENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVL 227
E D++ LE++E L E + S DP +C+I++Q+GAGGTE+ DWASM+L
Sbjct: 62 EEDSKQYLETIEGL----------EFRRMFSQPADPLNCFIDIQSGAGGTEAQDWASMLL 111
Query: 228 QMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDS 287
+ Y + +R+G++ L++E G++AGIK AT+KV+G+YAFG+ + E GVHRLVR SPFDS
Sbjct: 112 RQYLRYCERKGFKTELLEESAGDVAGIKSATLKVEGDYAFGFLRTESGVHRLVRKSPFDS 171
Query: 288 GKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPT 347
RHTSFA++ V P D S V+IN +DLRI+ +R+ GAGGQH N TDSAVRI H PT
Sbjct: 172 ANGRHTSFASLYVYPEI-DDSIEVEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPT 230
Query: 348 GITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVL 407
GI CQN+RSQH+NKA AM +L+S++ +LE+ ++ + +S +D+ WG+QIR+YVL
Sbjct: 231 GIVVQCQNDRSQHRNKAEAMSMLKSKLYELELRKRMADQQKLEESKSDVGWGHQIRSYVL 290
Query: 408 HPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
R +KDLRTN EVS+ VL+GDLD FI + L
Sbjct: 291 DQSR-IKDLRTNVEVSNTQKVLDGDLDMFIEASL 323
>gi|399521691|ref|ZP_10762431.1| Peptide chain release factor 1;RF-1 [Pseudomonas pseudoalcaligenes
CECT 5344]
gi|399110929|emb|CCH38991.1| Peptide chain release factor 1;RF-1 [Pseudomonas pseudoalcaligenes
CECT 5344]
Length = 378
Score = 306 bits (785), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 160/336 (47%), Positives = 224/336 (66%), Gaps = 8/336 (2%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++ EL ++W+ P +A + RE L ++ + L + D++++A EEND
Sbjct: 46 RLVEVNRELEDASVWNKPEYAQTLGRERAMLAQIVETIDDLTGSLADSKDLLEMAAEEND 105
Query: 171 TELELESLEALLTMRRKSKEK-ELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
E + + A + R+ EK E + SGE+DP +CY+++QAG+GGTE+ DWA+++L+M
Sbjct: 106 -EGAVNDIAAEVERLREILEKLEFRRMFSGEMDPNNCYLDIQAGSGGTEAQDWANILLRM 164
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y WA +RG+ T+++ GE+AGIK AT+ + GEYAFG+ + E GVHRLVR SPFDSG
Sbjct: 165 YLRWADKRGFDATIIELSEGEVAGIKGATVHIKGEYAFGWLRTESGVHRLVRKSPFDSGA 224
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RRHTSF+AV V P D ++IN +DLRI+ +RS GAGGQH NTTDSAVRI H+PT
Sbjct: 225 RRHTSFSAVFVSPEI-DDKVEIEINPADLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNT 283
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHP 409
CQNERSQH NK +AM +L++++ +LE+ ++ + S +DI WG+QIR+YVL
Sbjct: 284 VVACQNERSQHANKDTAMKMLRAKLYELEMQKRNAASQALEDSKSDIGWGHQIRSYVLDD 343
Query: 410 YRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E SD VL+GDLDG YL ASL
Sbjct: 344 SR-IKDLRTGVERSDCQKVLDGDLDG----YLEASL 374
>gi|387130322|ref|YP_006293212.1| peptide chain release factor 2 [Methylophaga sp. JAM7]
gi|386271611|gb|AFJ02525.1| Peptide chain release factor 2 [Methylophaga sp. JAM7]
Length = 348
Score = 306 bits (785), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 155/336 (46%), Positives = 222/336 (66%), Gaps = 4/336 (1%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++ EL P++W++P A ++ +E +L ++ + L + D++++A EE D
Sbjct: 16 RLVEVTRELEVPDVWNEPERAQKLGQERANLEKLVQTLSGHRDTLDDAKDLLEMAVEEGD 75
Query: 171 TELELESLEALLTMRRKSKEK-ELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
E ++ A L K EK E + SG+LD S Y+++QAG+GGTE+ DWA+M+L+M
Sbjct: 76 -EATFNAITADLDELEKGLEKLEFQRMFSGKLDASSAYLDIQAGSGGTEAQDWANMLLRM 134
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y W + Y+V LM+ G++AGIK AT++++GEYAFG + E GVHRLVR SPFDSG
Sbjct: 135 YLRWGEANEYKVELMEVSAGDVAGIKSATVRLEGEYAFGMLRTETGVHRLVRKSPFDSGA 194
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RRHTSFA+V V P D + + IN +DLR++ +RS GAGGQH NTTDSAVRI HIPT
Sbjct: 195 RRHTSFASVFVYPEV-DDTIEIDINPADLRVDTYRSSGAGGQHVNTTDSAVRITHIPTNT 253
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHP 409
CQ ERSQHQN+ AM L++++ +LE+ +Q ++ +S +DI WG+QIR+YVL
Sbjct: 254 VVQCQTERSQHQNRDRAMNALRAKLYELELQKQNEVKQAAEESKSDIGWGSQIRSYVLDQ 313
Query: 410 YRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E + +VL+GDLD FI + L + L
Sbjct: 314 SR-IKDLRTGVETGNTQAVLDGDLDQFIEASLKSGL 348
>gi|110634059|ref|YP_674267.1| peptide chain release factor 2 [Chelativorans sp. BNC1]
gi|110285043|gb|ABG63102.1| bacterial peptide chain release factor 2 (bRF-2) [Chelativorans sp.
BNC1]
Length = 322
Score = 306 bits (785), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 155/307 (50%), Positives = 209/307 (68%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE SL + + + L +++++IKL EE D + E+ A+ ++R + ++++
Sbjct: 2 RERQSLEENINAINGLSRSLDDNVELIKLGEEEGDAGIVEEAESAIRSLRGEISARQIET 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+EV AGAGGTES DWA M+L+MY WA+RRG +V ++ GE AGIK
Sbjct: 62 LLSGEADANDTYLEVHAGAGGTESQDWALMLLRMYTRWAERRGMKVETLEVHDGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI V G A+G+ K E GVHRLVRISPFDS RRHTSFA++ V P D S ++I E
Sbjct: 122 SATILVHGHNAYGWLKTESGVHRLVRISPFDSNARRHTSFASIWVYPVI-DDSIEIEIPE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
S++RI+ +RS GAGGQH NTTDSAVRI HIPTGI CQ ERSQH+N+A A +L++R+
Sbjct: 181 SEVRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIAVACQQERSQHKNRAKAWEMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+LE+ ++ + S +DI WG+QIR+YVL PY++VKDLRT E P VL+GDLD
Sbjct: 241 ELELKKREEAANATEASKSDIGWGHQIRSYVLQPYQLVKDLRTGVESPSPQDVLDGDLDE 300
Query: 436 FILSYLS 442
F+ + LS
Sbjct: 301 FMKASLS 307
>gi|150260100|ref|ZP_01916828.1| peptide chain release factor 2 [Yersinia pestis CA88-4125]
gi|153948098|ref|YP_001399866.1| peptide chain release factor 2 [Yersinia pseudotuberculosis IP
31758]
gi|218928062|ref|YP_002345937.1| peptide chain release factor 2 [Yersinia pestis CO92]
gi|229837575|ref|ZP_04457737.1| Peptide chain release factor 2 [Yersinia pestis Pestoides A]
gi|229840798|ref|ZP_04460957.1| Peptide chain release factor 2 [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229842643|ref|ZP_04462798.1| Peptide chain release factor 2 [Yersinia pestis biovar Orientalis
str. India 195]
gi|229903704|ref|ZP_04518817.1| Peptide chain release factor 2 [Yersinia pestis Nepal516]
gi|257168082|ref|NP_670572.2| peptide chain release factor 2 [Yersinia pestis KIM10+]
gi|384413531|ref|YP_005622893.1| Peptide chain release factor 2 [Yersinia pestis biovar Medievalis
str. Harbin 35]
gi|166977375|sp|A7FF38.1|RF2_YERP3 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|149289508|gb|EDM39585.1| peptide chain release factor 2 [Yersinia pestis CA88-4125]
gi|152959593|gb|ABS47054.1| peptide chain release factor 2 [Yersinia pseudotuberculosis IP
31758]
gi|229679474|gb|EEO75577.1| Peptide chain release factor 2 [Yersinia pestis Nepal516]
gi|229690953|gb|EEO83007.1| Peptide chain release factor 2 [Yersinia pestis biovar Orientalis
str. India 195]
gi|229697164|gb|EEO87211.1| Peptide chain release factor 2 [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229704263|gb|EEO91274.1| Peptide chain release factor 2 [Yersinia pestis Pestoides A]
gi|320014035|gb|ADV97606.1| Peptide chain release factor 2 [Yersinia pestis biovar Medievalis
str. Harbin 35]
Length = 365
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 154/360 (42%), Positives = 231/360 (64%), Gaps = 2/360 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
K+ ++ V++ L + RL ++AEL +P++W++P A + +E +L +
Sbjct: 8 KNRIQDLSDRTAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSTLEEIV 67
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
+ EQ L + +++LA E +D E E++ L + K + E + SGE D +
Sbjct: 68 TTIDQLEQGLEDVSGLLELAVEADDEETFNETIAELEVLDGKLGQLEFRRMFSGEYDRAN 127
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
CY+++QAG+GGTE+ DWASM+L+MY WA+ RG++ +++E G++AG+K AT+K+ GEY
Sbjct: 128 CYLDLQAGSGGTEAQDWASMLLRMYLRWAESRGFKTEIIEESDGDVAGLKSATVKIIGEY 187
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
AFG+ + E GVHRLVR SPFDSG RRHTSF++ V P D ++IN +DLRI+ +R+
Sbjct: 188 AFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEV-DDDIDIEINPADLRIDVYRA 246
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQM 385
GAGGQH N T+SAVRI HIPT I CQN+RSQH+NK AM L++++ + E+ ++
Sbjct: 247 SGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAD 306
Query: 386 NAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ +DI WG+QIR+YVL R +KDLRT E + +VL+GDLD FI + L A L
Sbjct: 307 KQVLEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASLKAGL 365
>gi|387892414|ref|YP_006322711.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
fluorescens A506]
gi|387161578|gb|AFJ56777.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
fluorescens A506]
Length = 364
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 152/354 (42%), Positives = 229/354 (64%), Gaps = 2/354 (0%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
+++ + I+ + + RL ++ EL P++W+ P +A + RE +L + +
Sbjct: 13 LSERSETIRGYFDYDQKHERLTEVNRELEDPSVWNKPEYAQELGRERAALAQIVDTLDEL 72
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
L + D++ +A EEND + + L + + E + S E+DP + Y+++Q
Sbjct: 73 NTGLGDCRDLLDMAVEENDEGAVGDVVAELARLEENLAKLEFRRMFSHEMDPNNAYLDIQ 132
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AG+GGTE+ DWA+++L+MY WA +RG+ T+M+ GE+AGIK AT+ + GEYAFG+ +
Sbjct: 133 AGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLR 192
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
E+GVHRLVR SPFDSG RRHTSF+AV V P D ++IN +DLRI+ +RS GAGGQ
Sbjct: 193 TEIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEI-DDKVEIEINPADLRIDTYRSSGAGGQ 251
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQ 391
H NTTDSAVRI H+PT +CQNERSQH NK +AM +L++++ + E+ ++ +
Sbjct: 252 HVNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRAKLYEQEMQKRNAASQALED 311
Query: 392 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ +DI WG+QIR+YVL R +KDLRTN E SD D VL+GD+D ++ + L + L
Sbjct: 312 TKSDIGWGHQIRSYVLDASR-IKDLRTNIERSDCDKVLDGDIDEYLEASLKSGL 364
>gi|116051698|ref|YP_789463.1| peptide chain release factor 2 [Pseudomonas aeruginosa UCBPP-PA14]
gi|115586919|gb|ABJ12934.1| putative peptide chain release factor 2 [Pseudomonas aeruginosa
UCBPP-PA14]
Length = 332
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 154/331 (46%), Positives = 219/331 (66%), Gaps = 6/331 (1%)
Query: 115 LSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELE 174
++ EL PN+W++P +A + RE L ++ + L + D++ +A EE+D
Sbjct: 4 VNRELEDPNVWNNPEYAQNLGRERAQLAQVVETLDDLTSGLADSRDLLDMAVEEDDEGAV 63
Query: 175 LESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWA 234
+ + +R ++ E + SGE+DP + Y+++QAG+GGTE+ DWA+M+L+MY WA
Sbjct: 64 DDVANEVERLREILEKLEFRRMFSGEMDPNNAYLDIQAGSGGTEAQDWANMLLRMYLRWA 123
Query: 235 QRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTS 294
+ G+ T+++ GE+AGIK AT+ + GEYAFG+ + E+GVHRLVR SPFDSG RRHTS
Sbjct: 124 DKHGFDATIIELSEGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGNRRHTS 183
Query: 295 FAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQ 354
F AV V P D + ++IN +DLRI+ +RS GAGGQH NTTDSAVRI H+PT CQ
Sbjct: 184 FTAVFVSPEI-DDNIEIEINPADLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQ 242
Query: 355 NERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVK 414
NERSQH NK +AM +L++++ +LE+ ++ + S +DI WG+QIR+YVL R +K
Sbjct: 243 NERSQHANKDTAMKMLRAKLYELEMQKRTAASQALEDSKSDIGWGHQIRSYVLDQSR-IK 301
Query: 415 DLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
DLRT E SD D VL+GDLD YL ASL
Sbjct: 302 DLRTGIERSDCDKVLDGDLD----EYLEASL 328
>gi|392383093|ref|YP_005032290.1| peptide chain release factor 2 (RF-2) [Azospirillum brasilense
Sp245]
gi|356878058|emb|CCC98920.1| peptide chain release factor 2 (RF-2) [Azospirillum brasilense
Sp245]
Length = 319
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 149/310 (48%), Positives = 211/310 (68%), Gaps = 1/310 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + +A E++L + +++I++ E D + ++ L +R ++ + ++++
Sbjct: 2 RERTQLETSVNGYRALERDLSDSLELIEMGEAEGDATVVADAEAQLYALRDRAAKLQIES 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D C+IEV AGAGGTE+ DWA M+++MY WA++ GY+ ++E PGE AGIK
Sbjct: 62 LLSGEADANDCFIEVNAGAGGTEAQDWALMLMRMYLRWAEQHGYKTQWLEESPGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
AT ++ G A+G+ K E GVHRLVRISPFDS RR TSFAAV+V P D +++INE
Sbjct: 122 SATAQISGHNAYGWLKTEAGVHRLVRISPFDSQARRQTSFAAVSVSPVI-DDKINIEINE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
D RI+ FR+ GAGGQH N TDSA+RI H+PTGI CQ ERSQH+N+A A +L++R+
Sbjct: 181 KDCRIDTFRASGAGGQHVNKTDSAIRITHLPTGIVVACQQERSQHKNRAKAWDMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ + A + +DI WG+QIR+YVLHPY+MVKDLRT E S +VL+GDLD
Sbjct: 241 ERELKIREDAAAALEATKSDIGWGHQIRSYVLHPYQMVKDLRTEVETSQSQAVLDGDLDM 300
Query: 436 FILSYLSASL 445
F+ + L+A L
Sbjct: 301 FLEAALAARL 310
>gi|452753071|ref|ZP_21952809.1| peptide chain release factor 2 [alpha proteobacterium JLT2015]
gi|451959689|gb|EMD82107.1| peptide chain release factor 2 [alpha proteobacterium JLT2015]
Length = 321
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 154/307 (50%), Positives = 214/307 (69%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
+E G L + +A +EL + +M++LA E D EL ++++AL + ++ ++ A
Sbjct: 2 QERGRLEEAVGATRAIRKELDDTAEMVELAEAEGDDELVNDAVKALAALAERADRDKVAA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+E+ +GAGGTES DWA M+ +MY+ WA+RRG +V L+D GE AGIK
Sbjct: 62 LLSGEADGNDTYVEINSGAGGTESNDWAGMLQRMYQRWAERRGMKVELVDYHAGEQAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
AT+ + G+ A+GYAK E GVHRLVRISP+DS RRHTSFA+V V P D +++NE
Sbjct: 122 SATLMLKGQGAYGYAKVESGVHRLVRISPYDSAARRHTSFASVWVYPVV-DDDIDIEVNE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SDL+I+ +R+ GAGGQH NTTDSAVRI H+PTGI CQN+RSQH+N+A AM L++R+
Sbjct: 181 SDLKIDTYRASGAGGQHVNTTDSAVRITHVPTGIVVACQNQRSQHKNRAQAMQQLKARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ R+ + + TDI WG+QIR+YVL PY+MVKDLRT +P +VL+GDLD
Sbjct: 241 EEELRRREEEANATNATKTDIGWGHQIRSYVLQPYQMVKDLRTGVTKGNPTAVLDGDLDE 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMAAALA 307
>gi|347538825|ref|YP_004846249.1| peptide chain release factor 2 [Pseudogulbenkiania sp. NH8B]
gi|345642002|dbj|BAK75835.1| peptide chain release factor 2 [Pseudogulbenkiania sp. NH8B]
Length = 355
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 145/316 (45%), Positives = 213/316 (67%), Gaps = 2/316 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
P +W+DP A + RE L + + + + + D+ +AREEND + L + L
Sbjct: 34 PEIWNDPKRAQDLGRERKQLEDVVLVIDSISGAVNDSRDLFDMAREENDADTILAVQDDL 93
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
K + E + +DP +C++++QAGAGGTE+ DWA M+L+MY +A+R+G++V
Sbjct: 94 AEAEAKLAQLEFRRMFHDPMDPNNCFLDIQAGAGGTEAQDWAGMLLRMYTRYAERKGFKV 153
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
+++E GE+AGI AT+K+ GEYA+G + EVGVHRLVR+SPFDS RRHTSF++V V
Sbjct: 154 EILEESEGEVAGITSATLKISGEYAYGLLRTEVGVHRLVRVSPFDSNARRHTSFSSVFVY 213
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P DS ++IN +DLR++ +R+ GAGGQH N TDSAVRI H PTGI CQN+RSQH+
Sbjct: 214 PEVDDSFV-IEINPADLRVDTYRASGAGGQHINKTDSAVRITHNPTGIVVQCQNDRSQHR 272
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
N+ AM +L++++ +LE+ ++ + + TD+ WG+QIR+YV R +KDLRT+YE
Sbjct: 273 NRDEAMQMLRAKLYELELKKRNEAKQALEDTKTDVGWGHQIRSYVFDQSR-IKDLRTSYE 331
Query: 422 VSDPDSVLEGDLDGFI 437
V + SV++GDLDGFI
Sbjct: 332 VGNIKSVMDGDLDGFI 347
>gi|317049377|ref|YP_004117025.1| hypothetical protein Pat9b_3172 [Pantoea sp. At-9b]
gi|316950994|gb|ADU70469.1| hypothetical protein Pat9b_3172 [Pantoea sp. At-9b]
Length = 365
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 155/360 (43%), Positives = 230/360 (63%), Gaps = 2/360 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
K+ + + V++ L + RL ++AEL +P++W++P A + +E SL +
Sbjct: 8 KNRIQDLTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEIIV 67
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
+ Q L + +++LA E +D E E++ L + K E E + SGE D
Sbjct: 68 GTLDQMYQGLEDVQGLLELAVEADDEETFNETIAELDGLETKLGELEFRRMFSGEYDSAD 127
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
CYI++QAG+GGTE+ DWASM+++MY WA+ +G++ +++E GE+AG+K ATI+V GEY
Sbjct: 128 CYIDLQAGSGGTEAQDWASMLMRMYLRWAEAKGFKTEIIEESEGEVAGLKSATIRVSGEY 187
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
AFG+ + E GVHRLVR SPFDSG RRHTSF++ + P D ++IN +DLRI+ +R+
Sbjct: 188 AFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFIYPEV-DDDIDIEINPADLRIDVYRA 246
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQM 385
GAGGQH N T+SAVRI HIPTG CQN+RSQH+NK AM +++++ +LE+ ++
Sbjct: 247 SGAGGQHVNRTESAVRITHIPTGTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAE 306
Query: 386 NAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ +DI WG+QIR+YVL R +KDLRT E + +VL+GDLD FI + L A L
Sbjct: 307 KQAAEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDRFIEASLKAGL 365
>gi|332288942|ref|YP_004419794.1| peptide chain release factor 2 [Gallibacterium anatis UMN179]
gi|330431838|gb|AEC16897.1| peptide chain release factor 2 [Gallibacterium anatis UMN179]
Length = 351
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 153/335 (45%), Positives = 221/335 (65%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL +SAEL +P++W+DP A + +E SL + +K+ +Q L + +++LA E +D
Sbjct: 19 RLEEVSAELEQPDVWNDPEKAQALGKERSSLEAVVNTIKSLQQGLDDVDGLLELAIEADD 78
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
E++ L + + + E + SG D CY+++QAG+GGTE+ DW M+L+MY
Sbjct: 79 QATFDEAVAELDQLEQSLAKLEFRRMFSGANDAADCYVDLQAGSGGTEAQDWTEMLLRMY 138
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA+ +G++ LM+ G++AGIK ATI+V GEYAFG+ + E G+HRLVR SPFDS R
Sbjct: 139 LRWAESKGFKAELMEVSDGDVAGIKSATIRVSGEYAFGWLRTETGIHRLVRKSPFDSNNR 198
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSF+AV V P D ++IN +DLRI+ +R+ GAGGQH N T+SAVRI H+PTGI
Sbjct: 199 RHTSFSAVFVYPEIND-DIDIEINPADLRIDVYRASGAGGQHVNRTESAVRITHMPTGIV 257
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+NK AM L++++ +LE+ ++ +S +DI WG+QIR+YVL
Sbjct: 258 VQCQNDRSQHKNKDQAMKQLKAKLYELELKKKNAEKQALEESKSDIGWGSQIRSYVLDDA 317
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E + +VL+GDLD FI + L A L
Sbjct: 318 R-IKDLRTGVENRNTQAVLDGDLDRFIEASLKAGL 351
>gi|326316598|ref|YP_004234270.1| peptide chain release factor 2 [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323373434|gb|ADX45703.1| Peptide chain release factor 2 [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 367
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 156/351 (44%), Positives = 229/351 (65%), Gaps = 4/351 (1%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
++Q Q +++ L + RL ++A L P++W+DP A + +E SL + +
Sbjct: 16 LSQRTQELRRYLDFDAKFERLRTVNASLEDPSVWNDPKKAQELGKEQKSLSAVVVTLDKL 75
Query: 152 EQELLEHIDMIKLAREENDTELELESLEA-LLTMRRKSKEKELDALLSGELDPCSCYIEV 210
+EL ++ ++ ++++EE D E L ++EA +R +E E + S E DP +C++++
Sbjct: 76 TRELADNAELYEMSKEEGD-EAGLLTIEAETAKLRPLIEELEFRRMFSNEADPLNCFVDI 134
Query: 211 QAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYA 270
QAGAGGTE+ DWA M+L+ Y +A+R+G++ T+ DE PG++AGIK ATIK++GEYA+G
Sbjct: 135 QAGAGGTEACDWAGMLLRQYLKYAERKGFKATVEDETPGDVAGIKSATIKIEGEYAYGLL 194
Query: 271 KAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGG 330
+ E GVHRLVR SPFDS RHTSFA++ V P D S + IN +D+R + FR+ GAGG
Sbjct: 195 RTETGVHRLVRKSPFDSSGGRHTSFASLFVYPEI-DDSIEININPADVRTDTFRASGAGG 253
Query: 331 QHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHT 390
QH N TDSAVR+ HIPTGI CQ+ RSQH N+ A L+SR+ E+ ++ + +
Sbjct: 254 QHINKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWQRLRSRLYDFEMRKRMEEQQKLE 313
Query: 391 QSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
+ TD+ WG+QIR+YVL R +KDLRTN EVS VL+GDLD FI + L
Sbjct: 314 DTKTDVGWGHQIRSYVLDNSR-IKDLRTNVEVSATQKVLDGDLDVFIEASL 363
>gi|261855042|ref|YP_003262325.1| hypothetical protein Hneap_0421 [Halothiobacillus neapolitanus c2]
gi|261835511|gb|ACX95278.1| hypothetical protein Hneap_0421 [Halothiobacillus neapolitanus c2]
Length = 365
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 149/336 (44%), Positives = 227/336 (67%), Gaps = 4/336 (1%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL + EL P++W+DP A + +E SL + + Q L ++ D++++A EE+D
Sbjct: 33 RLEEVDRELEVPDVWNDPARAQALGKERASLERVVHTLANMAQGLNDNADLLEMAAEEDD 92
Query: 171 TELELESLEA-LLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
E + S+E ++ ++ + E + SGE+D + Y+++Q+GAGGTES DWAS++++M
Sbjct: 93 -EATVASIEKDVVEFEKQIADLEFRRMFSGEMDESNAYLDIQSGAGGTESQDWASILMRM 151
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y W RRG++ +M+ GE+AGIK ATI+ +GEYAFG+ + E+GVHRLVR SPFDS
Sbjct: 152 YLRWGDRRGFKTEVMEMSDGEVAGIKSATIRFEGEYAFGWLRTEIGVHRLVRKSPFDSDN 211
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RRHTSFA+V V P D + +++N +DLR++ FR+ GAGGQH N T+SAVR H+PTG+
Sbjct: 212 RRHTSFASVFVSPEV-DDNIEIEVNPADLRVDVFRASGAGGQHVNRTESAVRFTHLPTGV 270
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHP 409
CQ ERSQ QN+ AM +L++++ +LE+ ++ ++ + +D+SWGNQIR+YVL
Sbjct: 271 VVACQAERSQIQNRERAMKMLKAKLYELEVQKRNAVSQALEDTKSDVSWGNQIRSYVLDQ 330
Query: 410 YRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT +E + +VL+GDLD FI + L + L
Sbjct: 331 SR-IKDLRTGHETGNTQAVLDGDLDPFIEASLKSGL 365
>gi|59802262|ref|YP_208974.1| peptide chain release factor 2 [Neisseria gonorrhoeae FA 1090]
gi|194099790|ref|YP_002002925.1| peptide chain release factor 2 [Neisseria gonorrhoeae NCCP11945]
gi|240013088|ref|ZP_04720001.1| peptide chain release factor 2 [Neisseria gonorrhoeae DGI18]
gi|240017657|ref|ZP_04724197.1| peptide chain release factor 2 [Neisseria gonorrhoeae FA6140]
gi|240122278|ref|ZP_04735240.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID24-1]
gi|254493466|ref|ZP_05106637.1| peptide chain release factor 2 [Neisseria gonorrhoeae 1291]
gi|268595771|ref|ZP_06129938.1| peptide chain release factor 2 [Neisseria gonorrhoeae 35/02]
gi|268597961|ref|ZP_06132128.1| peptide chain release factor 2 [Neisseria gonorrhoeae FA19]
gi|268600216|ref|ZP_06134383.1| peptide chain release factor 2 [Neisseria gonorrhoeae MS11]
gi|268602456|ref|ZP_06136623.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID18]
gi|268604723|ref|ZP_06138890.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID1]
gi|268681042|ref|ZP_06147904.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID332]
gi|268685277|ref|ZP_06152139.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-92-679]
gi|268685523|ref|ZP_06152385.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-93-1035]
gi|291044943|ref|ZP_06570652.1| peptide chain release factor 2 [Neisseria gonorrhoeae DGI2]
gi|293398016|ref|ZP_06642222.1| peptide chain release factor 2 [Neisseria gonorrhoeae F62]
gi|385336717|ref|YP_005890664.1| peptide chain release factor 2 [Neisseria gonorrhoeae TCDC-NG08107]
gi|75432344|sp|Q5F5H5.1|RF2_NEIG1 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|238693228|sp|B4RQU4.1|RF2_NEIG2 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|59719157|gb|AAW90562.1| putative peptide chain release factor 2 [Neisseria gonorrhoeae FA
1090]
gi|193935080|gb|ACF30904.1| PrfB [Neisseria gonorrhoeae NCCP11945]
gi|226512506|gb|EEH61851.1| peptide chain release factor 2 [Neisseria gonorrhoeae 1291]
gi|268549160|gb|EEZ44578.1| peptide chain release factor 2 [Neisseria gonorrhoeae 35/02]
gi|268551749|gb|EEZ46768.1| peptide chain release factor 2 [Neisseria gonorrhoeae FA19]
gi|268584347|gb|EEZ49023.1| peptide chain release factor 2 [Neisseria gonorrhoeae MS11]
gi|268586587|gb|EEZ51263.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID18]
gi|268588854|gb|EEZ53530.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID1]
gi|268621326|gb|EEZ53726.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID332]
gi|268625561|gb|EEZ57961.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-92-679]
gi|268625807|gb|EEZ58207.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-93-1035]
gi|291011837|gb|EFE03833.1| peptide chain release factor 2 [Neisseria gonorrhoeae DGI2]
gi|291611962|gb|EFF41031.1| peptide chain release factor 2 [Neisseria gonorrhoeae F62]
gi|317165260|gb|ADV08801.1| peptide chain release factor 2 [Neisseria gonorrhoeae TCDC-NG08107]
Length = 367
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 150/320 (46%), Positives = 216/320 (67%), Gaps = 2/320 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
P LW+DP A I +E L G + + + ++ +I++A EEND E E +
Sbjct: 46 PELWNDPKRAQEIGKESKILEGIVLTLDNIASGIEDNRMLIEMAVEENDEEGFAAVKEDV 105
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
+ ++ + E + + DP +C+I++ AGAGGTE+ DWA M+ +MY +A+R+G+++
Sbjct: 106 AGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDWAGMLFRMYSRYAERKGFKI 165
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
+++E GEIAGI RATI+V+GEYA+G + E GVHRLVR SPFDS +RHTSFA+V V
Sbjct: 166 EILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRYSPFDSNNKRHTSFASVFVY 225
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D S ++IN +DLRI+ +R+ GAGGQH N TDSAVRI H PTGI CQN+RSQH
Sbjct: 226 PEI-DDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGIVVQCQNDRSQHA 284
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
NKA+AM +L+S++ +LE+ ++ + + +D+ WG+QIR+YVL R +KDLRT YE
Sbjct: 285 NKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIRSYVLDSSR-IKDLRTGYE 343
Query: 422 VSDPDSVLEGDLDGFILSYL 441
V + +VL+GDLDGFI + L
Sbjct: 344 VGNTKAVLDGDLDGFIEASL 363
>gi|389874937|ref|YP_006374293.1| peptide chain release factor RF-2 [Tistrella mobilis KA081020-065]
gi|388532117|gb|AFK57311.1| peptide chain release factor RF-2 [Tistrella mobilis KA081020-065]
Length = 321
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 152/315 (48%), Positives = 214/315 (67%), Gaps = 1/315 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L G ++ + EQ + +++ +L E+D + E+ +L + + ++ ++++
Sbjct: 2 RERTQLEGAIERYRKLEQAFRDDLELAELGEMEDDESVVDEAQASLGRLLDELQKLKVES 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE+D Y+EV AGAGGTES DWA M+L+MY WA+ GY+ L++E GE AGIK
Sbjct: 62 LLSGEVDGNDSYLEVHAGAGGTESQDWALMLLRMYTRWAESHGYKTELVEETDGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
AT+ + G+ AFG+AK E GVHRLVRISPFDS RR TSFAAV V P D S ++I +
Sbjct: 122 SATLLIKGQNAFGWAKTETGVHRLVRISPFDSQARRQTSFAAVHVYPVI-DDSIDIEILD 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
DLRI+ +R+ GAGGQH N TDSA+RI H+PTGI CQ +RSQH+N+A+AMG+L++R+
Sbjct: 181 KDLRIDTYRASGAGGQHVNRTDSAIRITHVPTGIVVQCQQDRSQHKNRATAMGMLKARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ + + + TDI WG+QIR+YVLHPY+MVKDLRT E + +VL GDLD
Sbjct: 241 ERELRMREEKAQAEADAKTDIGWGHQIRSYVLHPYQMVKDLRTGVETGNTQAVLNGDLDA 300
Query: 436 FILSYLSASLDKDEG 450
F+ + LSA ++ G
Sbjct: 301 FMQAALSARVEGTSG 315
>gi|319779400|ref|YP_004130313.1| peptide chain release factor 2 [Taylorella equigenitalis MCE9]
gi|317109424|gb|ADU92170.1| Peptide chain release factor 2 [Taylorella equigenitalis MCE9]
gi|399115029|emb|CCG17826.1| peptide chain release factor 2 [Taylorella equigenitalis 14/56]
Length = 327
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 158/328 (48%), Positives = 218/328 (66%), Gaps = 10/328 (3%)
Query: 118 ELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELES 177
EL PN+W+DP A +S+E SL + + EQ + + D+ LA E+ND +
Sbjct: 2 ELEDPNIWNDPEKAQSLSKEKKSLEDVVIVLSELEQSIRDSKDLYTLALEDNDDS----T 57
Query: 178 LEALLTMRRKSKEK----ELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSW 233
L A+ +K EK E + S DP +C+I++Q GAGGTE+ DWASM+L+ Y +
Sbjct: 58 LIAIEEDSKKYLEKIEGLEFRRMFSQPADPLNCFIDIQFGAGGTEAQDWASMLLRQYLRY 117
Query: 234 AQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHT 293
+R+G++ +++E G++AGIK ATIKV+G+YAFG + E GVHRLVR SPFDS RHT
Sbjct: 118 CERKGFKTEVLEESAGDVAGIKSATIKVEGDYAFGLLRTESGVHRLVRKSPFDSANGRHT 177
Query: 294 SFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATC 353
SFA++ V P D S V IN +DLRI+ +R+ GAGGQH N TDSAVRI H PTGI C
Sbjct: 178 SFASLYVYPEI-DDSIEVDINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGIVVQC 236
Query: 354 QNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMV 413
QN+RSQH+NKA AM +L+S++ +LE+ ++ + +S +D+ WG+QIR+YVL R +
Sbjct: 237 QNDRSQHRNKAEAMSMLKSKLYELELRKRMAEQQKLEESKSDVGWGHQIRSYVLDQSR-I 295
Query: 414 KDLRTNYEVSDPDSVLEGDLDGFILSYL 441
KDLRTN EVS+ VL+GDLD FI + L
Sbjct: 296 KDLRTNVEVSNTQKVLDGDLDMFIEASL 323
>gi|317130277|ref|YP_004096559.1| hypothetical protein Bcell_3587 [Bacillus cellulosilyticus DSM
2522]
gi|315475225|gb|ADU31828.1| hypothetical protein Bcell_3587 [Bacillus cellulosilyticus DSM
2522]
Length = 366
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 158/362 (43%), Positives = 229/362 (63%), Gaps = 3/362 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
K AA+A+ + + L + R+ L ++ P+ WD+ +A +I E+ +L +
Sbjct: 7 KQELAAMAKRLNDFRGSLDLEEKETRIAELEELMSDPSFWDNQDNAQKIISENNALKEMV 66
Query: 146 KEVKAFEQELLEHIDM-IKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPC 204
+ E E E +D+ +L +EE D EL + + + +K + EL LLS D
Sbjct: 67 DTYRELEAEQ-EDLDVSYELVKEEGDEELAADLHAGIKELGKKFNDFELQLLLSEPYDKN 125
Query: 205 SCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGE 264
+ +E+ GAGGTES DWASM+L+MY+ WA +G++V +D +PG+ AG+K T+ + G
Sbjct: 126 NAILELHPGAGGTESQDWASMLLRMYQRWADDKGFKVETLDYLPGDEAGVKSVTLMISGH 185
Query: 265 YAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFR 324
A+GY KAE GVHRLVRISPFDS RRHTSF + V+P D + ++I+ L+I+ +R
Sbjct: 186 NAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVMPEL-DDNVEIEISPDQLKIDTYR 244
Query: 325 SGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQ 384
+ GAGGQH NTTDSAVRI H+PT TCQ+ERSQ +N+ AM +L++++ QLEI RQ Q
Sbjct: 245 ASGAGGQHINTTDSAVRITHLPTNTVVTCQSERSQIKNREQAMKMLKAKLFQLEIERQQQ 304
Query: 385 MNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSAS 444
E +DI WG+QIR+YV HPY MVKD RTNYE + SV++G+LD FI +YL +
Sbjct: 305 ELDEIRGEQSDIGWGSQIRSYVFHPYNMVKDHRTNYETGNTQSVMDGELDPFIDAYLRSK 364
Query: 445 LD 446
++
Sbjct: 365 IN 366
>gi|218555439|ref|YP_002388352.1| peptide chain release factor 2 [Escherichia coli IAI1]
gi|226739127|sp|B7LYF5.1|RF2_ECO8A RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|218362207|emb|CAQ99825.2| peptide chain release factor RF-2 [Escherichia coli IAI1]
Length = 365
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 152/348 (43%), Positives = 225/348 (64%), Gaps = 2/348 (0%)
Query: 98 VIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLE 157
V++ L + RL ++AEL +P++W++P A + +E SL + + +Q L +
Sbjct: 20 VLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLED 79
Query: 158 HIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGT 217
+++LA E +D E E++ L + K + E + SGE D CY+++QAG+GGT
Sbjct: 80 VSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGT 139
Query: 218 ESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVH 277
E+ DWASM+ +MY WA+ RG++ +++E GE+AGIK TIK+ G+YA+G+ + E GVH
Sbjct: 140 EAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVH 199
Query: 278 RLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTD 337
RLVR SPFDSG RRHTSF++ V P D ++IN +DLRI+ +R+ GAGGQH N T+
Sbjct: 200 RLVRKSPFDSGGRRHTSFSSAFVYPEV-DDDIDIEINPADLRIDVYRASGAGGQHVNRTE 258
Query: 338 SAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDIS 397
SAVRI HIPTGI CQN+RSQH+NK AM +++++ +LE+ ++ + +DI
Sbjct: 259 SAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIG 318
Query: 398 WGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
WG+QIR+YVL R +KDLRT E + +VL+G LD FI + L A L
Sbjct: 319 WGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL 365
>gi|15677951|ref|NP_275123.1| peptide chain release factor 2 [Neisseria meningitidis MC58]
gi|416198729|ref|ZP_11619096.1| peptide chain release factor 2 [Neisseria meningitidis CU385]
gi|427828244|ref|ZP_18995262.1| peptide chain release factor 2 [Neisseria meningitidis H44/76]
gi|433466118|ref|ZP_20423586.1| peptide chain release factor 2 [Neisseria meningitidis NM422]
gi|433489313|ref|ZP_20446458.1| peptide chain release factor 2 [Neisseria meningitidis M13255]
gi|433491493|ref|ZP_20448602.1| peptide chain release factor 2 [Neisseria meningitidis NM418]
gi|433506051|ref|ZP_20462979.1| peptide chain release factor 2 [Neisseria meningitidis 9506]
gi|433508129|ref|ZP_20465023.1| peptide chain release factor 2 [Neisseria meningitidis 9757]
gi|433510297|ref|ZP_20467149.1| peptide chain release factor 2 [Neisseria meningitidis 12888]
gi|433512387|ref|ZP_20469194.1| peptide chain release factor 2 [Neisseria meningitidis 4119]
gi|24638159|sp|Q9JXB3.1|RF2_NEIMB RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|7227395|gb|AAF42446.1| peptide chain release factor 2 [Neisseria meningitidis MC58]
gi|316984027|gb|EFV63006.1| peptide chain release factor 2 [Neisseria meningitidis H44/76]
gi|325139451|gb|EGC61991.1| peptide chain release factor 2 [Neisseria meningitidis CU385]
gi|432200320|gb|ELK56417.1| peptide chain release factor 2 [Neisseria meningitidis NM422]
gi|432219966|gb|ELK75794.1| peptide chain release factor 2 [Neisseria meningitidis M13255]
gi|432225245|gb|ELK80998.1| peptide chain release factor 2 [Neisseria meningitidis NM418]
gi|432238575|gb|ELK94141.1| peptide chain release factor 2 [Neisseria meningitidis 9506]
gi|432238711|gb|ELK94276.1| peptide chain release factor 2 [Neisseria meningitidis 9757]
gi|432244141|gb|ELK99637.1| peptide chain release factor 2 [Neisseria meningitidis 12888]
gi|432244520|gb|ELL00008.1| peptide chain release factor 2 [Neisseria meningitidis 4119]
Length = 367
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 150/320 (46%), Positives = 215/320 (67%), Gaps = 2/320 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
P LW+DP A I +E L G + + + ++ +I++ EEND E E +
Sbjct: 46 PELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLIEMTVEENDEEGFAAVQEDV 105
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
+ ++ + E + + DP +C+I++ AGAGGTE+ DWA M+ +MY +A+R+G+R+
Sbjct: 106 AGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDWAGMLFRMYSRYAERKGFRI 165
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
+++E GEIAGI RATI+V+GEYA+G + E GVHRLVR SPFDS +RHTSFA+V V
Sbjct: 166 EILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRYSPFDSNNKRHTSFASVFVY 225
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D S ++IN +DLRI+ +R+ GAGGQH N TDSAVRI H PTGI CQN+RSQH
Sbjct: 226 PEI-DDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGIVVQCQNDRSQHA 284
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
NKA+AM +L+S++ +LE+ ++ + + +D+ WG+QIR+YVL R +KDLRT YE
Sbjct: 285 NKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIRSYVLDSSR-IKDLRTGYE 343
Query: 422 VSDPDSVLEGDLDGFILSYL 441
V + +VL+GDLDGFI + L
Sbjct: 344 VGNTKAVLDGDLDGFIEASL 363
>gi|296446781|ref|ZP_06888719.1| peptide chain release factor 2 [Methylosinus trichosporium OB3b]
gi|296255656|gb|EFH02745.1| peptide chain release factor 2 [Methylosinus trichosporium OB3b]
Length = 322
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 150/308 (48%), Positives = 214/308 (69%), Gaps = 3/308 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE + ++ + E++L + + +++L END + E E + L + + ++E++++A
Sbjct: 2 RERTQIEDQLGAIARLERDLDDALTLVELGESENDADTEKEGIAQLEALLKDARERQIEA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
L SGE D YIEV +GAGGTES DWA M+ +MY WA+R+ ++V +++E G+ AGIK
Sbjct: 62 LFSGEADGNDTYIEVHSGAGGTESCDWARMLFRMYARWAERKKFKVEVIEETSGDEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
AT+ + G A G+AK E GVHRLVRISPFDS RRHTSFA+V V P D +Q+NE
Sbjct: 122 SATLLIKGMNAHGWAKTESGVHRLVRISPFDSNARRHTSFASVWVYPVV-DDKIDIQVNE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD RI+ +RS GAGGQH NTTDSA+RI HIP+GI CQ ERSQH+N+A+A +L++R+
Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAIRITHIPSGIVVACQAERSQHKNRATAWNMLRARLY 240
Query: 376 QLEI-ARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLD 434
++E+ R+A+ NA S TDI WG+QIR+YVL PY++VKDLRT + P VL+G+LD
Sbjct: 241 EMELKKREAEANAVEA-SKTDIGWGHQIRSYVLQPYQLVKDLRTGHTSGTPSEVLDGELD 299
Query: 435 GFILSYLS 442
F+ + L+
Sbjct: 300 DFMQASLA 307
>gi|451822971|ref|YP_007459245.1| peptide chain release factor RF-2 [Candidatus Kinetoplastibacterium
desouzaii TCC079E]
gi|451775771|gb|AGF46812.1| peptide chain release factor RF-2 [Candidatus Kinetoplastibacterium
desouzaii TCC079E]
Length = 367
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 151/341 (44%), Positives = 230/341 (67%), Gaps = 6/341 (1%)
Query: 99 IKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEH 158
+++ L++ RL ++ +EL P+LWD+P +A IS+E ++ + ++ + +E+ +
Sbjct: 23 LRRYLEYDKKIERLKIIDSELEDPHLWDNPHNAQLISKEKRTIEEILHDIDSIYEEIQDS 82
Query: 159 IDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTE 218
I++ LA+ + D + E ++ K + E + E DP +C++++QAGAGGTE
Sbjct: 83 IEIFYLAQNDEDHKTIKNLNENTNFIKEKIETLEFKRMFHNETDPLNCFLDIQAGAGGTE 142
Query: 219 SMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHR 278
+ DWASM+L+ Y +++++G++ L++E G++AGIK AT+K+ G YAFGY + E G+HR
Sbjct: 143 AQDWASMLLRQYVKYSEKKGFQTELIEESIGDVAGIKSATLKIIGNYAFGYLRTETGIHR 202
Query: 279 LVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDS 338
LVR SPFDS RHTSFA++ V P D S ++IN SDLRI+ +R+ GAGGQH N TDS
Sbjct: 203 LVRKSPFDSSNGRHTSFASIFVYPEI-DESFEIEINPSDLRIDTYRASGAGGQHINKTDS 261
Query: 339 AVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHT--QSLTDI 396
AVRI H PTGI CQ++RSQH+NKA A+ +L+S++ LE ++ ++N + S TD+
Sbjct: 262 AVRITHQPTGIVVQCQSDRSQHRNKAEALQILKSKLYDLE--KRNRLNEQQILEDSKTDV 319
Query: 397 SWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
WG+QIR+YVL R +KDLRTN EVS+ VL+GDLD FI
Sbjct: 320 GWGHQIRSYVLDQSR-IKDLRTNIEVSNTQKVLDGDLDIFI 359
>gi|15833017|ref|NP_311790.1| peptide chain release factor 2 [Escherichia coli O157:H7 str.
Sakai]
gi|26249306|ref|NP_755346.1| peptide chain release factor 2 [Escherichia coli CFT073]
gi|30064203|ref|NP_838374.1| peptide chain release factor 2 [Shigella flexneri 2a str. 2457T]
gi|170018863|ref|YP_001723817.1| peptide chain release factor 2 [Escherichia coli ATCC 8739]
gi|170682178|ref|YP_001745044.1| peptide chain release factor 2 [Escherichia coli SMS-3-5]
gi|215488191|ref|YP_002330622.1| peptide chain release factor 2 [Escherichia coli O127:H6 str.
E2348/69]
gi|218550138|ref|YP_002383929.1| peptide chain release factor 2 [Escherichia fergusonii ATCC 35469]
gi|218559884|ref|YP_002392797.1| peptide chain release factor 2 [Escherichia coli S88]
gi|218691016|ref|YP_002399228.1| peptide chain release factor 2 [Escherichia coli ED1a]
gi|218696486|ref|YP_002404153.1| peptide chain release factor 2 [Escherichia coli 55989]
gi|218701600|ref|YP_002409229.1| peptide chain release factor 2 [Escherichia coli IAI39]
gi|218706397|ref|YP_002413916.1| peptide chain release factor 2 [Escherichia coli UMN026]
gi|253772268|ref|YP_003035099.1| peptide chain release factor 2 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254162803|ref|YP_003045911.1| peptide chain release factor 2 [Escherichia coli B str. REL606]
gi|254289563|ref|YP_003055311.1| peptide chain release factor 2 [Escherichia coli BL21(DE3)]
gi|260845559|ref|YP_003223337.1| peptide chain release factor RF-2 [Escherichia coli O103:H2 str.
12009]
gi|260857014|ref|YP_003230905.1| peptide chain release factor 2 [Escherichia coli O26:H11 str.
11368]
gi|260869568|ref|YP_003235970.1| peptide chain release factor RF-2 [Escherichia coli O111:H- str.
11128]
gi|378711660|ref|YP_005276553.1| peptide chain release factor 2 [Escherichia coli KO11FL]
gi|387613515|ref|YP_006116631.1| peptide chain release factor 2 (RF-2) [Escherichia coli ETEC
H10407]
gi|387823480|ref|YP_006094281.1| peptide chain release factor RF2 [Escherichia coli BL21(DE3)]
gi|427806067|ref|ZP_18973134.1| peptide chain release factor RF-2 [Escherichia coli chi7122]
gi|427810660|ref|ZP_18977725.1| peptide chain release factor RF-2 [Escherichia coli]
gi|54039052|sp|P66024.1|RF2_ECO57 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|54039053|sp|P66025.1|RF2_SHIFL RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|54041596|sp|P66023.1|RF2_ECOL6 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|189040000|sp|B1ITB1.1|RF2_ECOLC RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|226739125|sp|B7MM78.1|RF2_ECO45 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|226739126|sp|B7NW32.1|RF2_ECO7I RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|226739128|sp|B7N7D5.1|RF2_ECOLU RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|226739129|sp|B1LR73.1|RF2_ECOSM RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|226739130|sp|B7LPA4.1|RF2_ESCF3 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|254790914|sp|B7UHU0.1|RF2_ECO27 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|254790915|sp|B7LF76.1|RF2_ECO55 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|254790916|sp|B7MZI9.1|RF2_ECO81 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|26109714|gb|AAN81919.1|AE016766_7 Peptide chain release factor 2 [Escherichia coli CFT073]
gi|13363235|dbj|BAB37186.1| peptide chain release factor RF-2 [Escherichia coli O157:H7 str.
Sakai]
gi|30042460|gb|AAP18184.1| peptide chain release factor RF-2 [Shigella flexneri 2a str. 2457T]
gi|169753791|gb|ACA76490.1| hypothetical protein EcolC_0818 [Escherichia coli ATCC 8739]
gi|170519896|gb|ACB18074.1| peptide chain release factor 2 [Escherichia coli SMS-3-5]
gi|215266263|emb|CAS10692.1| peptide chain release factor RF-2 [Escherichia coli O127:H6 str.
E2348/69]
gi|218353218|emb|CAU99134.1| peptide chain release factor RF-2 [Escherichia coli 55989]
gi|218357679|emb|CAQ90320.2| peptide chain release factor RF-2 [Escherichia fergusonii ATCC
35469]
gi|218366653|emb|CAR04407.2| peptide chain release factor RF-2 [Escherichia coli S88]
gi|218371586|emb|CAR19425.2| peptide chain release factor RF-2 [Escherichia coli IAI39]
gi|218428580|emb|CAR09507.2| peptide chain release factor RF-2 [Escherichia coli ED1a]
gi|218433494|emb|CAR14397.2| peptide chain release factor RF-2 [Escherichia coli UMN026]
gi|253323312|gb|ACT27914.1| hypothetical protein ECBD_0846 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253974704|gb|ACT40375.1| peptide chain release factor 2 [Escherichia coli B str. REL606]
gi|253978870|gb|ACT44540.1| peptide chain release factor 2 [Escherichia coli BL21(DE3)]
gi|257755663|dbj|BAI27165.1| peptide chain release factor RF-2 [Escherichia coli O26:H11 str.
11368]
gi|257760706|dbj|BAI32203.1| peptide chain release factor RF-2 [Escherichia coli O103:H2 str.
12009]
gi|257765924|dbj|BAI37419.1| peptide chain release factor RF-2 [Escherichia coli O111:H- str.
11128]
gi|309703251|emb|CBJ02586.1| peptide chain release factor 2 (RF-2) [Escherichia coli ETEC
H10407]
gi|313848742|emb|CAQ33203.2| peptide chain release factor RF2 [Escherichia coli BL21(DE3)]
gi|323377221|gb|ADX49489.1| Peptide chain release factor 2 [Escherichia coli KO11FL]
gi|412964249|emb|CCK48177.1| peptide chain release factor RF-2 [Escherichia coli chi7122]
gi|412970839|emb|CCJ45491.1| peptide chain release factor RF-2 [Escherichia coli]
Length = 365
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 152/348 (43%), Positives = 225/348 (64%), Gaps = 2/348 (0%)
Query: 98 VIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLE 157
V++ L + RL ++AEL +P++W++P A + +E SL + + +Q L +
Sbjct: 20 VLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLED 79
Query: 158 HIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGT 217
+++LA E +D E E++ L + K + E + SGE D CY+++QAG+GGT
Sbjct: 80 VSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGT 139
Query: 218 ESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVH 277
E+ DWASM+ +MY WA+ RG++ +++E GE+AGIK TIK+ G+YA+G+ + E GVH
Sbjct: 140 EAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVH 199
Query: 278 RLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTD 337
RLVR SPFDSG RRHTSF++ V P D ++IN +DLRI+ +R+ GAGGQH N T+
Sbjct: 200 RLVRKSPFDSGGRRHTSFSSAFVYPEV-DDDIDIEINPADLRIDVYRASGAGGQHVNRTE 258
Query: 338 SAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDIS 397
SAVRI HIPTGI CQN+RSQH+NK AM +++++ +LE+ ++ + +DI
Sbjct: 259 SAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIG 318
Query: 398 WGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
WG+QIR+YVL R +KDLRT E + +VL+G LD FI + L A L
Sbjct: 319 WGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL 365
>gi|385854173|ref|YP_005900687.1| peptide chain release factor 2 [Neisseria meningitidis H44/76]
gi|325201177|gb|ADY96632.1| peptide chain release factor 2 [Neisseria meningitidis H44/76]
Length = 341
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 150/320 (46%), Positives = 215/320 (67%), Gaps = 2/320 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
P LW+DP A I +E L G + + + ++ +I++ EEND E E +
Sbjct: 20 PELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLIEMTVEENDEEGFAAVQEDV 79
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
+ ++ + E + + DP +C+I++ AGAGGTE+ DWA M+ +MY +A+R+G+R+
Sbjct: 80 AGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDWAGMLFRMYSRYAERKGFRI 139
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
+++E GEIAGI RATI+V+GEYA+G + E GVHRLVR SPFDS +RHTSFA+V V
Sbjct: 140 EILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRYSPFDSNNKRHTSFASVFVY 199
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D S ++IN +DLRI+ +R+ GAGGQH N TDSAVRI H PTGI CQN+RSQH
Sbjct: 200 PEI-DDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGIVVQCQNDRSQHA 258
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
NKA+AM +L+S++ +LE+ ++ + + +D+ WG+QIR+YVL R +KDLRT YE
Sbjct: 259 NKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIRSYVLDSSR-IKDLRTGYE 317
Query: 422 VSDPDSVLEGDLDGFILSYL 441
V + +VL+GDLDGFI + L
Sbjct: 318 VGNTKAVLDGDLDGFIEASL 337
>gi|261401531|ref|ZP_05987656.1| peptide chain release factor 2 [Neisseria lactamica ATCC 23970]
gi|269208367|gb|EEZ74822.1| peptide chain release factor 2 [Neisseria lactamica ATCC 23970]
Length = 367
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 152/343 (44%), Positives = 224/343 (65%), Gaps = 2/343 (0%)
Query: 99 IKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEH 158
I+ + ++ RL + P LW+DP A I +E L G + + + ++
Sbjct: 23 IRVYMDYQGKKDRLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDN 82
Query: 159 IDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTE 218
+I++ EEND E E ++ + ++ + E + + DP +C+I++ AGAGGTE
Sbjct: 83 RMLIEMTVEENDEEGFAAVKEDVVGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTE 142
Query: 219 SMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHR 278
+ DWA M+ +MY +A+R+G+++ +++E GEIAGI RATI+V+GEYA+G + E GVHR
Sbjct: 143 AEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHR 202
Query: 279 LVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDS 338
LVR SPFDS +RHTSFA+V V P D S ++IN +DLRI+ +R+ GAGGQH N TDS
Sbjct: 203 LVRYSPFDSNNKRHTSFASVFVYPEI-DDSIEIEINPADLRIDTYRASGAGGQHINKTDS 261
Query: 339 AVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISW 398
AVRI H PTGI CQN+RSQH NKA+AM +L+S++ +LE+ ++ + + +D+ W
Sbjct: 262 AVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGW 321
Query: 399 GNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
G+QIR+YVL R +KDLRT YEV + +VL+GDLDGFI + L
Sbjct: 322 GSQIRSYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 363
>gi|16130793|ref|NP_417367.1| peptide chain release factor RF-2 [Escherichia coli str. K-12
substr. MG1655]
gi|170082452|ref|YP_001731772.1| peptide chain release factor 2 [Escherichia coli str. K-12 substr.
DH10B]
gi|238902016|ref|YP_002927812.1| peptide chain release factor 2 [Escherichia coli BW2952]
gi|386594374|ref|YP_006090774.1| hypothetical protein [Escherichia coli DH1]
gi|387622566|ref|YP_006130194.1| peptide chain release factor RF-2 [Escherichia coli DH1]
gi|388478900|ref|YP_491092.1| peptide chain release factor RF-2 [Escherichia coli str. K-12
substr. W3110]
gi|2507293|sp|P07012.3|RF2_ECOLI RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|229576667|sp|B1XEH8.1|RF2_ECODH RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|259585244|sp|C5A0G3.1|RF2_ECOBW RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|28373696|pdb|1ML5|Z Chain Z, Structure Of The E. Coli Ribosomal Termination Complex
With Release Factor 2
gi|2367172|gb|AAC75929.1| peptide chain release factor RF-2 [Escherichia coli str. K-12
substr. MG1655]
gi|85675703|dbj|BAE76956.1| peptide chain release factor RF-2 [Escherichia coli str. K12
substr. W3110]
gi|169890287|gb|ACB03994.1| peptide chain release factor RF-2 [Escherichia coli str. K-12
substr. DH10B]
gi|238861985|gb|ACR63983.1| peptide chain release factor RF-2 [Escherichia coli BW2952]
gi|260448063|gb|ACX38485.1| hypothetical protein EcDH1_0801 [Escherichia coli DH1]
gi|315137490|dbj|BAJ44649.1| peptide chain release factor RF-2 [Escherichia coli DH1]
gi|228558|prf||1806195A peptide chain-releasing factor:ISOTYPE=2
Length = 365
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 152/348 (43%), Positives = 225/348 (64%), Gaps = 2/348 (0%)
Query: 98 VIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLE 157
V++ L + RL ++AEL +P++W++P A + +E SL + + +Q L +
Sbjct: 20 VLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLED 79
Query: 158 HIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGT 217
+++LA E +D E E++ L + K + E + SGE D CY+++QAG+GGT
Sbjct: 80 VSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGT 139
Query: 218 ESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVH 277
E+ DWASM+ +MY WA+ RG++ +++E GE+AGIK TIK+ G+YA+G+ + E GVH
Sbjct: 140 EAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVH 199
Query: 278 RLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTD 337
RLVR SPFDSG RRHTSF++ V P D ++IN +DLRI+ +R+ GAGGQH N T+
Sbjct: 200 RLVRKSPFDSGGRRHTSFSSAFVYPEV-DDDIDIEINPADLRIDVYRTSGAGGQHVNRTE 258
Query: 338 SAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDIS 397
SAVRI HIPTGI CQN+RSQH+NK AM +++++ +LE+ ++ + +DI
Sbjct: 259 SAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIG 318
Query: 398 WGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
WG+QIR+YVL R +KDLRT E + +VL+G LD FI + L A L
Sbjct: 319 WGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL 365
>gi|283788451|ref|YP_003368316.1| peptide chain release factor 2 [Citrobacter rodentium ICC168]
gi|282951905|emb|CBG91623.1| peptide chain release factor 2 (RF-2) [Citrobacter rodentium
ICC168]
Length = 365
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 153/348 (43%), Positives = 224/348 (64%), Gaps = 2/348 (0%)
Query: 98 VIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLE 157
V++ L + RL ++AEL +P++W++P A + +E SL + + Q L +
Sbjct: 20 VLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTLDQMAQGLED 79
Query: 158 HIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGT 217
+++LA E +D E E++ L + K + E + SGE D CY+++QAG+GGT
Sbjct: 80 VSGLLELAVEADDEETFNEAVAELDMLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGT 139
Query: 218 ESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVH 277
E+ DWASM+ +MY WA+ RG++ +++E GE+AGIK TIK+ GEYA+G+ + E GVH
Sbjct: 140 EAQDWASMLERMYLRWAEARGFKTEIIEESEGEVAGIKSVTIKISGEYAYGWLRTETGVH 199
Query: 278 RLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTD 337
RLVR SPFDSG RRHTSF++ V P D ++IN +DLRI+ +R+ GAGGQH N T+
Sbjct: 200 RLVRKSPFDSGGRRHTSFSSAFVYPEV-DDDIDIEINPADLRIDVYRASGAGGQHVNRTE 258
Query: 338 SAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDIS 397
SAVRI HIPTGI CQN+RSQH+NK AM +++++ +LE+ ++ + +DI
Sbjct: 259 SAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIG 318
Query: 398 WGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
WG+QIR+YVL R +KDLRT E + +VL+G LD FI + L A L
Sbjct: 319 WGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL 365
>gi|311278189|ref|YP_003940420.1| peptide chain release factor 2 [Enterobacter cloacae SCF1]
gi|308747384|gb|ADO47136.1| Peptide chain release factor 2 [Enterobacter cloacae SCF1]
Length = 365
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 151/348 (43%), Positives = 226/348 (64%), Gaps = 2/348 (0%)
Query: 98 VIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLE 157
V++ L + RL ++AEL +P++W++P A + +E SL + + Q L +
Sbjct: 20 VLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTLNQMAQGLED 79
Query: 158 HIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGT 217
+++LA E +D E E++ L + K + E + SGE D CY+++QAG+GGT
Sbjct: 80 VSGLLELAVEADDEETFNEAVAELDVLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGT 139
Query: 218 ESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVH 277
E+ DWASM+L+MY WA+ RG++ +++E GE+AG+K ATIK+ G+YA+G+ + E GVH
Sbjct: 140 EAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGLKSATIKISGDYAYGWLRTETGVH 199
Query: 278 RLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTD 337
RLVR SPFDSG RRHTSF++ V P D ++IN +DLRI+ +R+ GAGGQH N T+
Sbjct: 200 RLVRKSPFDSGGRRHTSFSSAFVYPEV-DDDIDIEINPADLRIDVYRASGAGGQHVNRTE 258
Query: 338 SAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDIS 397
SAVRI HIP+G+ CQN+RSQH+NK AM +++++ +LE+ ++ + +DI
Sbjct: 259 SAVRITHIPSGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDTKSDIG 318
Query: 398 WGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
WG+QIR+YVL R +KDLRT E + +VL+G LD FI + L A L
Sbjct: 319 WGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL 365
>gi|358637040|dbj|BAL24337.1| peptide chain release factor 2 [Azoarcus sp. KH32C]
Length = 359
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 156/332 (46%), Positives = 220/332 (66%), Gaps = 4/332 (1%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
+L ++ L P +W++ A + +E L + ++ EQ ++ D+ LA+ E+D
Sbjct: 27 KLEEVTRALEDPAVWNNAEKAQELGKEKRQLENVVVNLRDIEQMSVDLKDLFDLAQAEDD 86
Query: 171 TELELESLEA-LLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
E L ++E L + K E + S +DP SC+IE+QAGAGGTE+ DWA M+ +M
Sbjct: 87 -EDTLSAVEGDLAPLEAKVHMLEFRRMFSNPMDPNSCFIEIQAGAGGTEAQDWAGMLERM 145
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y + +R+G+ V LM+E GE+AGIK ATIKV GEYA+G+ + E G+HRLVR SPFDS
Sbjct: 146 YLRYCERKGFNVELMEESEGEVAGIKSATIKVGGEYAYGFLRTETGIHRLVRKSPFDSNA 205
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RRHTSF++V V P D S + IN +DLRI+ +R+ GAGGQH N TDSAVRI H PTG+
Sbjct: 206 RRHTSFSSVFVYPEV-DDSIEIDINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGV 264
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHP 409
CQN+RSQH+NKA AM +L++R+ +LE+ ++ + S +DI WG+QIR+YVL
Sbjct: 265 VVQCQNDRSQHKNKAEAMSMLKARLYELELRKRQAEQQKLEDSKSDIGWGHQIRSYVLDQ 324
Query: 410 YRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
R +KDLRTNYEV + +VL+GDL+ FI + L
Sbjct: 325 SR-IKDLRTNYEVGNTQAVLDGDLEDFIAASL 355
>gi|187924547|ref|YP_001896189.1| peptide chain release factor 2 [Burkholderia phytofirmans PsJN]
gi|187715741|gb|ACD16965.1| peptide chain release factor 2 [Burkholderia phytofirmans PsJN]
Length = 417
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 153/343 (44%), Positives = 227/343 (66%), Gaps = 6/343 (1%)
Query: 103 LQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMI 162
+ + +RL ++ EL P++W+D HA + RE L + ++ + + +L + D+
Sbjct: 77 FDYDDKALRLIEVNRELEDPDVWNDSKHAQALGREKKLLDDTVGKLTSLDNDLRDAQDLF 136
Query: 163 KLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDW 222
+AREE+D E L + ++ + E + + DP + ++++QAGAGGTE+ DW
Sbjct: 137 DMAREEDDEETLLACESDAQGIEQRVADMEFRRMFANPADPNNAFLDIQAGAGGTEACDW 196
Query: 223 ASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRI 282
ASM+L+ Y + +R+G++ ++++ G++AGIK ATIK++GEYA+G+ + E GVHRLVR
Sbjct: 197 ASMLLRQYLRYCERKGFKTEVLEQTDGDVAGIKNATIKIEGEYAYGFLRTETGVHRLVRK 256
Query: 283 SPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRI 342
SPFDS RHTSF++V V P D S V IN +DLRI+ +R+ GAGGQH N TDSAVRI
Sbjct: 257 SPFDSSGGRHTSFSSVFVYPEI-DDSIEVDINPADLRIDTYRASGAGGQHINKTDSAVRI 315
Query: 343 IHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQI 402
HIP+GI CQN+RSQH+N+A AM +L+SR+ + EI ++ + + TD+ WG+QI
Sbjct: 316 THIPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQEEQDKLEAGKTDVGWGHQI 375
Query: 403 RTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R+YVL R +KDLRTN E+S+ SVL+GDLD FI SASL
Sbjct: 376 RSYVLDNSR-IKDLRTNVEISNTKSVLDGDLDPFI----SASL 413
>gi|347756472|ref|YP_004864035.1| peptide chain release factor 2 (bRF-2) [Candidatus
Chloracidobacterium thermophilum B]
gi|347588989|gb|AEP13518.1| bacterial peptide chain release factor 2 (bRF-2) [Candidatus
Chloracidobacterium thermophilum B]
Length = 344
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 154/339 (45%), Positives = 219/339 (64%), Gaps = 3/339 (0%)
Query: 112 LNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDT 171
+ L A + +P+ W+D A +I +E L ++ +++E + + + A + +
Sbjct: 1 METLEARIAQPDFWNDQEQAQKILKERRRLAQAIETAAFYDRETADLEVLFEFAEADPAS 60
Query: 172 ELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYK 231
ELE + L +++K + E LLSG D + + +Q+GAGGT++ DWA M+L+MY
Sbjct: 61 LTELE--QRLRVLQQKVEADETQMLLSGPNDANNAIVRIQSGAGGTDAQDWAEMLLRMYL 118
Query: 232 SWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRR 291
W +RRG++ +L+D PG+ AGI A V+G+YA+G E GVHRLVRISPF S R
Sbjct: 119 RWCERRGFKTSLLDVQPGKEAGITSAEFTVEGDYAYGLLSCESGVHRLVRISPFSSSGTR 178
Query: 292 HTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITA 351
TSFA++ V P D ++INE DLRI+ +RS GAGGQH N TDSA+RI H+PTGI
Sbjct: 179 ETSFASIFVTPEVEDD-IEIEINEKDLRIDTYRSSGAGGQHVNVTDSAIRITHLPTGIVV 237
Query: 352 TCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYR 411
+CQN+RSQHQN+ AM VL+SR+ +LE+ R+ +A+ + DIS+G+QIR YVLHPYR
Sbjct: 238 SCQNQRSQHQNREVAMKVLKSRLYELELERRRAESAKLEAAKRDISFGSQIRNYVLHPYR 297
Query: 412 MVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKDEG 450
+VKD RT E SD +SVL+GDLD FI YL A + +G
Sbjct: 298 LVKDTRTKLERSDVESVLDGDLDDFIKEYLVARSRQPDG 336
>gi|296136248|ref|YP_003643490.1| hypothetical protein Tint_1790 [Thiomonas intermedia K12]
gi|295796370|gb|ADG31160.1| conserved hypothetical protein [Thiomonas intermedia K12]
Length = 367
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 158/357 (44%), Positives = 232/357 (64%), Gaps = 8/357 (2%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
+ Q +Q ++ L + RL ++ L P +W+DP A + RE SL + +++
Sbjct: 16 LQQRVQALRGYLDFDAKASRLMEVAGALEDPQVWNDPKRAQELGRERKSLETVVLGLESL 75
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEK-ELDALLSGELDPCSCYIEV 210
L +H ++ +++REE D + E++EA + E E + S LDP +C+I++
Sbjct: 76 TTALADHSELFEMSREEGD-DATCEAIEADVEKSAAEVEALEFRRMFSNPLDPSNCFIDI 134
Query: 211 QAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYA 270
QAGAGGTE+ DWASM+L+ Y + +R+G++ +M+E G++AGI+ ATIKV+G+YA+G
Sbjct: 135 QAGAGGTEACDWASMLLRQYLRYCERKGFKTEVMEETEGDVAGIRSATIKVEGDYAYGQL 194
Query: 271 KAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGG 330
+ E GVHRLVR SPFDS RHTSFA+V V P D S + IN +D+R + FR+ GAGG
Sbjct: 195 RTETGVHRLVRKSPFDSSGGRHTSFASVFVYPEV-DDSIEIDINPADVRTDTFRASGAGG 253
Query: 331 QHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ--AQMNAE 388
QH N TDSAVR+ H+PTGI CQN+RSQH+N+A A +L+SR+ + E+ ++ Q E
Sbjct: 254 QHINKTDSAVRLTHMPTGIVVQCQNDRSQHKNRAEAWQMLRSRLYEHEMRKRMAEQQTLE 313
Query: 389 HTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
T+S D+ WG+QIR+YVL R +KDLRTN E+S+ VL+GDLD FI + L + L
Sbjct: 314 STKS--DVGWGHQIRSYVLDQSR-IKDLRTNVEISNTQKVLDGDLDEFITASLKSGL 367
>gi|440232230|ref|YP_007346023.1| bacterial peptide chain release factor 2 (bRF-2) [Serratia
marcescens FGI94]
gi|440053935|gb|AGB83838.1| bacterial peptide chain release factor 2 (bRF-2) [Serratia
marcescens FGI94]
Length = 365
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 151/360 (41%), Positives = 235/360 (65%), Gaps = 2/360 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
K+ +++ V++ L + RL ++AEL +P++W++P A + +E +L +
Sbjct: 8 KNRIQDLSERTAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSALEAIV 67
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
+ + +Q + + +++LA E +D E E++ L + K ++ E + SGE D
Sbjct: 68 ETIDGLQQGEEDVLGLLELAVEADDEETFNEAVVELDQLIVKLEQLEFRRMFSGEYDSAD 127
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
CY+++QAG+GGTE+ DWASM+L+MY WA+ +G++ +++E G++AGIK ATIK+ G+Y
Sbjct: 128 CYLDIQAGSGGTEAQDWASMLLRMYLRWAEDKGFKTEIIEESDGDVAGIKSATIKIIGDY 187
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
AFG+ + E GVHRLVR SPFDSG RRHTSF++V V P D + ++IN +DLRI+ +R+
Sbjct: 188 AFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSVFVYPEV-DDNIDIEINPADLRIDVYRA 246
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQM 385
GAGGQH N T+SAVRI H+PT I CQN+RSQH+NK A L++++ + E+ ++
Sbjct: 247 SGAGGQHVNKTESAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLYEFEMQKKNAD 306
Query: 386 NAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ +DI WG+QIR+YVL R +KDLRT+ E + +VL+GDLD FI + L A L
Sbjct: 307 KQAMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTSVETRNTQAVLDGDLDKFIEASLKAGL 365
>gi|16761822|ref|NP_457439.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29143309|ref|NP_806651.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56414987|ref|YP_152062.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197363916|ref|YP_002143553.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|61230204|sp|P0A289.1|RF2_SALTY RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|61230205|sp|P0A290.1|RF2_SALTI RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|76363351|sp|Q5PJG1.1|RF2_SALPA RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|238690721|sp|B5BFK6.1|RF2_SALPK RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|25299688|pir||AG0871 peptide chain release factor 2 (RF-2) [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|154276|gb|AAA72914.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
serovar Typhimurium]
gi|16504124|emb|CAD02871.1| peptide chain release factor 2 (RF-2) [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29138943|gb|AAO70511.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56129244|gb|AAV78750.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197095393|emb|CAR60952.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 365
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 155/354 (43%), Positives = 227/354 (64%), Gaps = 2/354 (0%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
+ + V++ L + RL ++AEL +P++W++P A + +E SL + +
Sbjct: 14 LTERTNVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTLDQM 73
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
Q L + +++LA E +D E E++ L T+ K + E + SGE D CY+++Q
Sbjct: 74 TQGLDDVSGLLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQ 133
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AG+GGTE+ DWASM+L+MY WA+ RG++ +++E GE+AGIK ATIK+ GEYA+G+ +
Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAYGWLR 193
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
E GVHRLVR SPFDSG RRHTSF++ V P + IN +DLRI+ +R+ GAGGQ
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVD-DDIDIDINPADLRIDVYRASGAGGQ 252
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQ 391
H N T+SAVRI HIPTGI CQN+RSQH+NK AM +++++ +LE+ ++
Sbjct: 253 HVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMED 312
Query: 392 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ +DI WG+QIR+YVL R +KDLRT E + +VL+G LD FI + L A L
Sbjct: 313 TKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL 365
>gi|78485070|ref|YP_390995.1| peptide chain release factor 2 [Thiomicrospira crunogena XCL-2]
gi|78363356|gb|ABB41321.1| bacterial peptide chain release factor 2 (bRF-2) [Thiomicrospira
crunogena XCL-2]
Length = 332
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 150/328 (45%), Positives = 216/328 (65%), Gaps = 2/328 (0%)
Query: 118 ELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELES 177
EL P +W+DP A + +E L + ++ E L +++++A + D E+ E
Sbjct: 7 ELEDPTVWNDPERAQALGKEKSQLDNVVTTIQDLESSLESAHEILEMAEMDADQEMVDEV 66
Query: 178 LEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRR 237
+ L + K ++ E + SGELD +CY+E+QAG+GGTE+ DWA+M+L+MY WA+
Sbjct: 67 VSELARLEEKLEQLEFQRMFSGELDANNCYLEIQAGSGGTEAQDWANMILRMYLRWAESH 126
Query: 238 GYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAA 297
G++ +++ G++AGIK AT+ V G+YAFG+ + E GVHRLVR SPFDSG RRHTSFA+
Sbjct: 127 GFKAEILEISAGDVAGIKGATVHVQGDYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFAS 186
Query: 298 VAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNER 357
V + P D S V+IN +DLRI+ +R+ GAGGQH N T+SAVRI H+PT CQN R
Sbjct: 187 VFISPEI-DDSFEVEINPADLRIDVYRASGAGGQHVNKTESAVRITHLPTNTVTQCQNGR 245
Query: 358 SQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLR 417
SQHQNKA AM L++++ +LE+ + E ++ +DI WG+QIR+YVL R +KDLR
Sbjct: 246 SQHQNKAEAMKQLRAKLYELEMLSRNAEKQEMEENKSDIGWGSQIRSYVLDSGR-IKDLR 304
Query: 418 TNYEVSDPDSVLEGDLDGFILSYLSASL 445
TN E + + VL+GDLD FI+ L A +
Sbjct: 305 TNVETGNTNGVLDGDLDQFIIPSLKAGV 332
>gi|194289273|ref|YP_002005180.1| peptide chain release factor rf-2 [Cupriavidus taiwanensis LMG
19424]
gi|193223108|emb|CAQ69113.1| peptide chain release factor RF-2 [Cupriavidus taiwanensis LMG
19424]
Length = 357
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 158/337 (46%), Positives = 229/337 (67%), Gaps = 6/337 (1%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL+ ++ L P++W++P A + +E L G + + +L+ ++ +LA+EE D
Sbjct: 25 RLDEVNGLLEDPDVWNNPKRAQDLGKEKKMLEGVVGVLGKLTDDLVGAEELFELAKEEGD 84
Query: 171 TELELESLEA-LLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
+ LES+EA + + E + SGE+D + +I++QAGAGGTE+ DWASM+L+
Sbjct: 85 DDT-LESIEADVKGFEAVVADMEFRRMFSGEMDQANAFIDIQAGAGGTEACDWASMLLRQ 143
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y + +R+G++ +++E G++AGIK ATIK++GEYAFGY + E GVHRLVR SPFDS
Sbjct: 144 YLKYCERKGFKAEVLEESEGDVAGIKSATIKIEGEYAFGYLRTETGVHRLVRKSPFDSSG 203
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RHTSF++V V P D S V+IN +DLR++ +R+ GAGGQH N TDSAVRI HIPTGI
Sbjct: 204 GRHTSFSSVFVYPEV-DDSFEVEINPADLRVDTYRASGAGGQHINKTDSAVRITHIPTGI 262
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQS-LTDISWGNQIRTYVLH 408
CQN+RSQH+N+A AM +L+SR+ + E+ R+ Q A+ ++ TD+ WG+QIR+YVL
Sbjct: 263 VVQCQNDRSQHRNRAEAMSMLKSRLYEHEM-RKRQAEADKLEAGKTDVGWGHQIRSYVLD 321
Query: 409 PYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRTN E+S+ VL+GDLD FI + L L
Sbjct: 322 QSR-IKDLRTNVEMSNTQKVLDGDLDPFIEASLKQGL 357
>gi|349611133|ref|ZP_08890442.1| peptide chain release factor 2 [Neisseria sp. GT4A_CT1]
gi|348614623|gb|EGY64165.1| peptide chain release factor 2 [Neisseria sp. GT4A_CT1]
Length = 367
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 149/320 (46%), Positives = 216/320 (67%), Gaps = 2/320 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
P LW+DP A I +E L G + + + ++ +I++A EEND E E +
Sbjct: 46 PELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLIEMAVEENDEEGFAAVQEDV 105
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
+ ++ + E + + DP +C+I++ AGAGGTE+ DWA M+ +MY +A+R+G+++
Sbjct: 106 AGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDWAGMLFRMYSRYAERKGFKI 165
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
+++E GEIAGI RATI+V+GEYA+G + E GVHRLVR SPFDS +RHTSF++V V
Sbjct: 166 EILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRYSPFDSNNKRHTSFSSVFVY 225
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D S ++IN +DLRI+ +R+ GAGGQH N TDSAVRI H PTGI CQN+RSQH
Sbjct: 226 PEI-DDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGIVVQCQNDRSQHA 284
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
NKA+AM +L+S++ +LE+ ++ + + +D+ WG+QIR+YVL R +KDLRT YE
Sbjct: 285 NKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIRSYVLDSSR-IKDLRTGYE 343
Query: 422 VSDPDSVLEGDLDGFILSYL 441
V + +VL+GDLDGFI + L
Sbjct: 344 VGNTKAVLDGDLDGFIEASL 363
>gi|261420549|ref|YP_003254231.1| hypothetical protein GYMC61_3194 [Geobacillus sp. Y412MC61]
gi|297531361|ref|YP_003672636.1| hypothetical protein GC56T3_3133 [Geobacillus sp. C56-T3]
gi|319768218|ref|YP_004133719.1| hypothetical protein [Geobacillus sp. Y412MC52]
gi|261377006|gb|ACX79749.1| hypothetical protein GYMC61_3194 [Geobacillus sp. Y412MC61]
gi|297254613|gb|ADI28059.1| hypothetical protein GC56T3_3133 [Geobacillus sp. C56-T3]
gi|317113084|gb|ADU95576.1| hypothetical protein GYMC52_3223 [Geobacillus sp. Y412MC52]
Length = 367
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 156/360 (43%), Positives = 223/360 (61%), Gaps = 1/360 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
K +A+ + I+ L + R+ L ++ PN WDD A + E +L +
Sbjct: 8 KQELEKMAKRLAEIRGSLDLEAKQARIRELEEQMAAPNFWDDQKAAQAVISEVNALKDLV 67
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
+E + E+ +L +EE D EL+ E +E + + E EL LL+ D +
Sbjct: 68 EEFSSLEERFDNLEVTYELLKEEPDDELQAELVEEAKKLMKDFSEFELQLLLNEPYDQNN 127
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
+E+ GAGGTES DWASM+L+MY WA+++G++V +D +PGE AGIK T+ + G
Sbjct: 128 AILELHPGAGGTESQDWASMLLRMYTRWAEKKGFKVETLDYLPGEEAGIKSVTLLIKGHN 187
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
A+GY KAE GVHRLVRISPFD+ RRHTSF + V+P D + ++I +L+I+ +RS
Sbjct: 188 AYGYLKAEKGVHRLVRISPFDASGRRHTSFVSCEVVPEL-DDNIEIEIRPEELKIDTYRS 246
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQM 385
GAGGQH NTTDSAVRI H+PTGI TCQ+ERSQ +N+ AM +L++++ Q ++ Q
Sbjct: 247 SGAGGQHVNTTDSAVRITHLPTGIVVTCQSERSQIKNREKAMNMLKAKLYQKKLEEQQAE 306
Query: 386 NAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
AE +I WGNQIR+YV HPY +VKD RTN EV + +V++G++D FI +YL A L
Sbjct: 307 LAELRGEQKEIGWGNQIRSYVFHPYSLVKDHRTNVEVGNVQAVMDGEIDVFIDAYLRAKL 366
>gi|336323796|ref|YP_004603763.1| peptide chain release factor 2 [Flexistipes sinusarabici DSM 4947]
gi|336107377|gb|AEI15195.1| Peptide chain release factor 2 [Flexistipes sinusarabici DSM 4947]
Length = 370
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 155/362 (42%), Positives = 227/362 (62%), Gaps = 21/362 (5%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
K + +++++ K+ + K + R + +P+ W RE L+ +
Sbjct: 14 KKRIESFSEAVKADDKKKRIKEIERR------SVEEPDFWS--------KRESKYLLKEQ 59
Query: 146 KEVKAFEQ------ELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSG 199
++K F E LE+ID+ EE E++ + ++ + E EL +L+
Sbjct: 60 SKLKKFLNRYDELLETLENIDVYMELFEEGSEEVKQDIETSVHNLENLVDEFELTLILND 119
Query: 200 ELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATI 259
E D + + + +GAGGTE+ DWA+M+ +MY W +R+ Y+ L+D +PG+ AGIK T
Sbjct: 120 ENDSNNAIVTIHSGAGGTEANDWAAMLYRMYSRWIERKNYKQELLDYLPGDEAGIKSVTF 179
Query: 260 KVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLR 319
V G+Y++GY K E G+HRLVR SPFDS +RHTSFA+V V+P D V +NESDLR
Sbjct: 180 NVIGDYSYGYLKGENGIHRLVRQSPFDSNNKRHTSFASVFVLPEI-DDDIEVDLNESDLR 238
Query: 320 IERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI 379
I+ +R+ GAGGQH NTTDSAVRI H PTGI +CQNERSQH+NKA AM +L++R+ + E+
Sbjct: 239 IDTYRASGAGGQHVNTTDSAVRITHEPTGIVVSCQNERSQHKNKAHAMKILKARLYEREL 298
Query: 380 ARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILS 439
++ + E S T++ WGNQIR+YV+HPY+MVKDLRT +E + D+VL+GD+D FI S
Sbjct: 299 EKKNEERQELEDSKTEMGWGNQIRSYVMHPYKMVKDLRTRHETGNVDAVLDGDIDDFIKS 358
Query: 440 YL 441
YL
Sbjct: 359 YL 360
>gi|354599124|ref|ZP_09017141.1| peptide chain release factor 2 [Brenneria sp. EniD312]
gi|353677059|gb|EHD23092.1| peptide chain release factor 2 [Brenneria sp. EniD312]
Length = 365
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 152/360 (42%), Positives = 229/360 (63%), Gaps = 2/360 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
K+ +++ V++ L + RL ++AEL +P++W++P A + +E SL +
Sbjct: 8 KNRIQDLSERTAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIV 67
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
+ Q L + +++LA EE+D + E+ L + K + E + SGE D
Sbjct: 68 DTIDQMTQGLEDVAGLLELAVEEDDEDTFNETAAELDALENKLGQLEFRRMFSGEYDSAD 127
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
CY+++QAG+GGTE+ DWASM+++MY WA+ +G++ +++E GE+AG K ATIK+ G+Y
Sbjct: 128 CYLDIQAGSGGTEAQDWASMLVRMYLRWAEAKGFKTEIIEESDGEVAGTKSATIKIMGDY 187
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
AFG+ + E GVHRLVR SPFDSG RRHTSF++ V P D ++IN +DLRI+ +R+
Sbjct: 188 AFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEV-DDDIDIEINPADLRIDVYRA 246
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQM 385
GAGGQH N T+SAVRI H+PT I CQN+RSQH+NK AM L++++ + E+ ++
Sbjct: 247 SGAGGQHVNRTESAVRITHLPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAE 306
Query: 386 NAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ +DI WG+QIR+YVL R +KDLRT E + +VL+GDLD FI + L A L
Sbjct: 307 KQVMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASLKAGL 365
>gi|404378910|ref|ZP_10983986.1| peptide chain release factor 2 [Simonsiella muelleri ATCC 29453]
gi|294483256|gb|EFG30942.1| peptide chain release factor 2 [Simonsiella muelleri ATCC 29453]
Length = 367
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 152/350 (43%), Positives = 226/350 (64%), Gaps = 2/350 (0%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
+AQ + I+ + ++ RL + P LW+DP A I +E L G + +
Sbjct: 16 LAQRNRDIRDYMDYQGKKERLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVLTMDNL 75
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
E + ++ ++I + EENDT+ + + + + E + + DP +C+I++
Sbjct: 76 ENGIADNRELIDMVVEENDTDGFAAIIADVADLETQMAALEFKRMFNQPADPNNCFIDIT 135
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AGAGGTE+ DWA M+ +MY +A+R+G+++ +++E GEIAGI RATI+V+G+YA+G +
Sbjct: 136 AGAGGTEAEDWAGMLFRMYSRYAERKGFKLDILEEDDGEIAGINRATIRVEGKYAYGLLR 195
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
E GVHRLVR SPFD+ +RHTSFA+V V P D S + IN +DLRI+ +R+ GAGGQ
Sbjct: 196 TETGVHRLVRYSPFDANNKRHTSFASVFVYPEV-DDSIEIDINPADLRIDTYRASGAGGQ 254
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQ 391
H N TDSAVRI H PTGI CQN+RSQH NKA+AM +L+S++ +LE+ ++ + +
Sbjct: 255 HINKTDSAVRITHEPTGIVVQCQNDRSQHANKAAAMEMLRSKLFELEMRKRNEEKQALEE 314
Query: 392 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
+D+ WG+QIR+YVL R +KDLRT YEV + +VL+GDLDGFI + L
Sbjct: 315 GKSDVGWGSQIRSYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 363
>gi|255066677|ref|ZP_05318532.1| peptide chain release factor 2 [Neisseria sicca ATCC 29256]
gi|255049005|gb|EET44469.1| peptide chain release factor 2 [Neisseria sicca ATCC 29256]
Length = 367
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 149/320 (46%), Positives = 215/320 (67%), Gaps = 2/320 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
P LW+DP A I +E L G + + + ++ +I++ EEND E E +
Sbjct: 46 PELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLIEMTVEENDEEGFAAVQEDV 105
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
+ ++ + E + + DP +C+I++ AGAGGTE+ DWA M+ +MY +A+R+G+++
Sbjct: 106 AELEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDWAGMLFRMYSRYAERKGFKI 165
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
+++E GEIAGI RATI+V+GEYA+G + E GVHRLVR SPFDS +RHTSFA+V V
Sbjct: 166 EILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRYSPFDSNNKRHTSFASVFVY 225
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D S ++IN +DLRI+ +R+ GAGGQH N TDSAVRI H PTGI CQN+RSQH
Sbjct: 226 PEI-DDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGIVVQCQNDRSQHA 284
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
NKA+AM +L+S++ +LE+ ++ + + +D+ WG+QIR+YVL R +KDLRT YE
Sbjct: 285 NKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIRSYVLDSSR-IKDLRTGYE 343
Query: 422 VSDPDSVLEGDLDGFILSYL 441
V + +VL+GDLDGFI + L
Sbjct: 344 VGNTKAVLDGDLDGFIEASL 363
>gi|322831509|ref|YP_004211536.1| Peptide chain release factor 2 [Rahnella sp. Y9602]
gi|321166710|gb|ADW72409.1| Peptide chain release factor 2 [Rahnella sp. Y9602]
Length = 365
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 151/360 (41%), Positives = 233/360 (64%), Gaps = 2/360 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
K+ +++ V++ L + RL ++AEL +P++W++P A + +E SL +
Sbjct: 8 KNRIQDLSERTVVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIV 67
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
+ + Q + +++LA E +D + E++ L + K ++ E + SGE D S
Sbjct: 68 ETIDELLQGAEDVTGLLELAVEADDEDTFNETVAELDVLTAKLEQLEFRRMFSGEYDSAS 127
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
CY+++QAG+GGTE+ DWASM+L+MY WA+ +G++ +++E GE+AG+K ATIK+ G+Y
Sbjct: 128 CYLDIQAGSGGTEAQDWASMLLRMYLRWAEAKGFKTEVIEESDGEVAGLKSATIKIIGDY 187
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
AFG+ + E GVHRLVR SPFDSG RRHTSF++ V P D ++IN +DLRI+ +R+
Sbjct: 188 AFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEV-DDDIEIEINPADLRIDVYRA 246
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQM 385
GAGGQH N T+SAVRI H+PT I CQN+RSQH+NK AM +++++ + E+ ++
Sbjct: 247 SGAGGQHVNKTESAVRITHLPTNIVTQCQNDRSQHKNKDQAMKQMRAKLYEYEMQKKNAD 306
Query: 386 NAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ + +DI WG+QIR+YVL R +KDLRT E + +VL+GDLD FI + L A L
Sbjct: 307 KQQLEDTKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASLKAGL 365
>gi|225077011|ref|ZP_03720210.1| hypothetical protein NEIFLAOT_02063 [Neisseria flavescens
NRL30031/H210]
gi|261379582|ref|ZP_05984155.1| peptide chain release factor 2 [Neisseria subflava NJ9703]
gi|224951568|gb|EEG32777.1| hypothetical protein NEIFLAOT_02063 [Neisseria flavescens
NRL30031/H210]
gi|284798056|gb|EFC53403.1| peptide chain release factor 2 [Neisseria subflava NJ9703]
Length = 367
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 152/343 (44%), Positives = 224/343 (65%), Gaps = 2/343 (0%)
Query: 99 IKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEH 158
I+ + ++ RL + P LW+DP A I +E L G + + + ++
Sbjct: 23 IRVYMDYQGKKDRLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVVTLDNIATGIEDN 82
Query: 159 IDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTE 218
+I++A EEND E E + + ++ + E + + DP +C+I++ AGAGGTE
Sbjct: 83 RMLIEMAVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTE 142
Query: 219 SMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHR 278
+ DWA M+ +MY +A+R+G+++ +++E GEIAGI RATI+V+GEYA+G + E GVHR
Sbjct: 143 AEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHR 202
Query: 279 LVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDS 338
LVR SPFDS +RHTSF++V V P D S ++IN +DLRI+ +R+ GAGGQH N TDS
Sbjct: 203 LVRYSPFDSNNKRHTSFSSVFVYPEI-DDSIEIEINPADLRIDTYRASGAGGQHINKTDS 261
Query: 339 AVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISW 398
AVRI H PTGI CQN+RSQH NKA+AM +L+S++ +LE+ ++ + + +D+ W
Sbjct: 262 AVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGW 321
Query: 399 GNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
G+QIR+YVL R +KDLRT YEV + +VL+GDLDGFI + L
Sbjct: 322 GSQIRSYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 363
>gi|334129644|ref|ZP_08503448.1| Peptide chain release factor 2 [Methyloversatilis universalis FAM5]
gi|333445329|gb|EGK73271.1| Peptide chain release factor 2 [Methyloversatilis universalis FAM5]
Length = 320
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 158/329 (48%), Positives = 219/329 (66%), Gaps = 24/329 (7%)
Query: 124 LWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND------TELELES 177
+W+D A + +E L ++ +++ + L + D+ LAREE D E + E
Sbjct: 1 MWNDTARAQELGKEKHGLESVVRTLESIDARLADARDLFDLAREEADEDTVVAIEADKEK 60
Query: 178 LEAL---LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWA 234
+EA L RR + + DP +C++E+QAGAGGTE+ DWASM+L+MY +
Sbjct: 61 IEADVAGLEFRR---------MFNNPQDPSNCFLEIQAGAGGTEAQDWASMLLRMYVKYC 111
Query: 235 QRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTS 294
+R+G+ V +M+E GE+AGIK AT+KV EYA+G + E G+HRLVR SPFDSG RRHTS
Sbjct: 112 ERKGFGVEVMEESEGEVAGIKSATLKVSAEYAYGTLRTETGIHRLVRKSPFDSGARRHTS 171
Query: 295 FAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQ 354
F++V V P D S V IN +DLR++ FR+ GAGGQH N TDSA+RI H+PTGI CQ
Sbjct: 172 FSSVFVYPEV-DDSIEVDINPADLRVDTFRASGAGGQHINKTDSAIRITHVPTGIVVQCQ 230
Query: 355 NERSQHQNKASAMGVLQSRVNQLEIARQ--AQMNAEHTQSLTDISWGNQIRTYVLHPYRM 412
N+RSQH+N+A AM +L+SR+ + E+ ++ AQ E T+S DI WG+QIR+YVL R
Sbjct: 231 NDRSQHKNRAEAMAMLKSRLYEAELRKRQAAQQALEDTKS--DIGWGHQIRSYVLDQSR- 287
Query: 413 VKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
+KDLRTN+EV + +VL+GDLDGFI + L
Sbjct: 288 IKDLRTNHEVGNTQAVLDGDLDGFIQASL 316
>gi|241760713|ref|ZP_04758805.1| peptide chain release factor 2 [Neisseria flavescens SK114]
gi|241318894|gb|EER55420.1| peptide chain release factor 2 [Neisseria flavescens SK114]
Length = 367
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 152/343 (44%), Positives = 224/343 (65%), Gaps = 2/343 (0%)
Query: 99 IKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEH 158
I+ + ++ RL + P LW+DP A I +E L G + + + ++
Sbjct: 23 IRIYMDYQGKKDRLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVVTLDNIATGIEDN 82
Query: 159 IDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTE 218
+I++A EEND E E + + ++ + E + + DP +C+I++ AGAGGTE
Sbjct: 83 RMLIEMAVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTE 142
Query: 219 SMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHR 278
+ DWA M+ +MY +A+R+G+++ +++E GEIAGI RATI+V+GEYA+G + E GVHR
Sbjct: 143 AEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHR 202
Query: 279 LVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDS 338
LVR SPFDS +RHTSF++V V P D S ++IN +DLRI+ +R+ GAGGQH N TDS
Sbjct: 203 LVRYSPFDSNNKRHTSFSSVFVYPEI-DDSIEIEINPADLRIDTYRASGAGGQHINKTDS 261
Query: 339 AVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISW 398
AVRI H PTGI CQN+RSQH NKA+AM +L+S++ +LE+ ++ + + +D+ W
Sbjct: 262 AVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGW 321
Query: 399 GNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
G+QIR+YVL R +KDLRT YEV + +VL+GDLDGFI + L
Sbjct: 322 GSQIRSYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 363
>gi|346642767|ref|YP_258268.2| peptide chain release factor 2 [Pseudomonas protegens Pf-5]
gi|341579906|gb|AAY90424.2| peptide chain release factor 2 [Pseudomonas protegens Pf-5]
Length = 364
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 152/354 (42%), Positives = 230/354 (64%), Gaps = 2/354 (0%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
+++ + I+ L + + RL ++ EL P++W+ P +A + RE +L ++ +
Sbjct: 13 LSERSETIRGYLCYDQKHERLTEVNRELEDPSVWNKPEYAQELGRERAALAQIVETLDEL 72
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
L + D++ +A EE D + + L + + E + S E+DP + Y+++Q
Sbjct: 73 NGGLADCRDLLDMAVEEEDEGAVGDVVAELARLEENLAKLEFRRMFSHEMDPNNAYLDIQ 132
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AG+GGTE+ DWA+++L+MY WA +RG+ T+M+ GE+AGIK AT+ + GEYAFG+ +
Sbjct: 133 AGSGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLR 192
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
E+GVHRLVR SPFDSG RRHTSF+AV V P D ++IN +DLRI+ +RS GAGGQ
Sbjct: 193 TEIGVHRLVRKSPFDSGNRRHTSFSAVFVSPEI-DDKVEIEINPADLRIDTYRSSGAGGQ 251
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQ 391
H NTTDSAVRI H+PT +CQNERSQH NK +AM +L++++ + E+ ++ +
Sbjct: 252 HVNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRAKLYEQEMQKRNAASQALED 311
Query: 392 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ +DI WG+QIR+YVL R +KDLRTN E SD D VL+GD+D ++ + L + L
Sbjct: 312 TKSDIGWGHQIRSYVLDASR-IKDLRTNIERSDCDKVLDGDIDEYLEASLKSGL 364
>gi|348590022|ref|YP_004874484.1| peptide chain release factor 2 [Taylorella asinigenitalis MCE3]
gi|347973926|gb|AEP36461.1| Peptide chain release factor 2 [Taylorella asinigenitalis MCE3]
Length = 327
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 156/334 (46%), Positives = 220/334 (65%), Gaps = 22/334 (6%)
Query: 118 ELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLARE---------- 167
EL PN+W+DP A +S+E SL + + EQ + + D+ +LA E
Sbjct: 2 ELEDPNIWNDPEKAQSLSKEKKSLEDVVLVLSELEQSIRDSKDLYELAVEDSDDSTLIAI 61
Query: 168 ENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVL 227
E D++ LE++E L E + S DP +C+I++Q+GAGGTE+ DWASM+L
Sbjct: 62 EEDSKRYLEAIEGL----------EFRRMFSQPADPLNCFIDIQSGAGGTEAQDWASMLL 111
Query: 228 QMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDS 287
+ Y + +R+G++ L++E G++AGIK AT+KV+G+YAFG+ + E GVHRLVR SPFDS
Sbjct: 112 RQYLRYCERKGFKTELLEESAGDVAGIKSATLKVEGDYAFGFLRTESGVHRLVRKSPFDS 171
Query: 288 GKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPT 347
RHTSFA++ V P D V+IN +DLRI+ +R+ GAGGQH N TDSAVRI H PT
Sbjct: 172 ANGRHTSFASLYVYPEI-DDLIEVEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPT 230
Query: 348 GITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVL 407
GI CQN+RSQH+NKA AM +L+S++ +LE+ ++ + +S +D+ WG+QIR+YVL
Sbjct: 231 GIVVQCQNDRSQHRNKAEAMSMLKSKLYELELRKRMADQQKLEESKSDVGWGHQIRSYVL 290
Query: 408 HPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
R +KDLRTN EVS+ VL+GDLD FI + L
Sbjct: 291 DQSR-IKDLRTNVEVSNTQKVLDGDLDMFIEASL 323
>gi|254804065|ref|YP_003082286.1| peptide chain release factor 2 [Neisseria meningitidis alpha14]
gi|385852212|ref|YP_005898727.1| peptide chain release factor 2 [Neisseria meningitidis M04-240196]
gi|416215034|ref|ZP_11623245.1| peptide chain release factor 2 [Neisseria meningitidis M01-240013]
gi|418289303|ref|ZP_12901654.1| peptide chain release factor 2 [Neisseria meningitidis NM233]
gi|418291561|ref|ZP_12903546.1| peptide chain release factor 2 [Neisseria meningitidis NM220]
gi|421560151|ref|ZP_16006014.1| peptide chain release factor 2 [Neisseria meningitidis 92045]
gi|421862691|ref|ZP_16294396.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|433470278|ref|ZP_20427683.1| peptide chain release factor 2 [Neisseria meningitidis 98080]
gi|254667607|emb|CBA03375.1| peptide chain release factor 2 [Neisseria meningitidis alpha14]
gi|254673936|emb|CBA09720.1| peptide chain release factor RF-2 [Neisseria meningitidis alpha275]
gi|309379815|emb|CBX21591.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|325143543|gb|EGC65864.1| peptide chain release factor 2 [Neisseria meningitidis M01-240013]
gi|325207035|gb|ADZ02488.1| peptide chain release factor 2 [Neisseria meningitidis M04-240196]
gi|372199674|gb|EHP13888.1| peptide chain release factor 2 [Neisseria meningitidis NM220]
gi|372199890|gb|EHP14055.1| peptide chain release factor 2 [Neisseria meningitidis NM233]
gi|389606895|emb|CCA45806.1| peptide chain release factor 1 RF-1 [Neisseria meningitidis
alpha522]
gi|402333807|gb|EJU69105.1| peptide chain release factor 2 [Neisseria meningitidis 92045]
gi|432200812|gb|ELK56901.1| peptide chain release factor 2 [Neisseria meningitidis 98080]
Length = 367
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 152/343 (44%), Positives = 223/343 (65%), Gaps = 2/343 (0%)
Query: 99 IKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEH 158
I+ + ++ RL + P LW+DP A I +E L G + + + ++
Sbjct: 23 IRVYMDYQGKKDRLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDN 82
Query: 159 IDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTE 218
+I++ EEND E E + + ++ + E + + DP +C+I++ AGAGGTE
Sbjct: 83 RMLIEMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTE 142
Query: 219 SMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHR 278
+ DWA M+ +MY +A+R+G+++ +++E GEIAGI RATI+V+GEYA+G + E GVHR
Sbjct: 143 AEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHR 202
Query: 279 LVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDS 338
LVR SPFDS +RHTSFA+V V P D S ++IN +DLRI+ +R+ GAGGQH N TDS
Sbjct: 203 LVRYSPFDSNNKRHTSFASVFVYPEI-DDSIEIEINPADLRIDTYRASGAGGQHINKTDS 261
Query: 339 AVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISW 398
AVRI H PTGI CQN+RSQH NKA+AM +L+S++ +LE+ ++ + + +D+ W
Sbjct: 262 AVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGW 321
Query: 399 GNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
G+QIR+YVL R +KDLRT YEV + +VL+GDLDGFI + L
Sbjct: 322 GSQIRSYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 363
>gi|398886665|ref|ZP_10641530.1| peptide chain release factor 2 [Pseudomonas sp. GM60]
gi|398188745|gb|EJM76040.1| peptide chain release factor 2 [Pseudomonas sp. GM60]
Length = 403
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 151/335 (45%), Positives = 221/335 (65%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++ EL P++W+ P +A + RE +L + + L + D++ +A EEND
Sbjct: 71 RLTEVNRELEDPSVWNKPEYAQELGRERSALAQIVDTLDELNTGLADCRDLLDMAVEEND 130
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
+ + L + + E + S E+DP + Y+++QAG+GGTE+ DWA+++L+MY
Sbjct: 131 EGAVGDVVAELARLEENLAKLEFRRMFSHEMDPNNAYLDIQAGSGGTEAQDWANILLRMY 190
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA +RG+ T+M+ GE+AGIK AT+ + GEYAFG+ + E+GVHRLVR SPFDSG R
Sbjct: 191 LRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGNR 250
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSF+AV V P D ++IN +DLRI+ +RS GAGGQH NTTDSAVRI H+PT
Sbjct: 251 RHTSFSAVFVSPEI-DDKVEIEINPADLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTV 309
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
+CQNERSQH NK +AM +L++++ + E+ ++ + + +DI WG+QIR+YVL
Sbjct: 310 VSCQNERSQHANKDTAMKMLRAKLYEQEMQKRNAASQALEDTKSDIGWGHQIRSYVLDAS 369
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRTN E SD D VL+GD+D ++ + L + L
Sbjct: 370 R-IKDLRTNIERSDCDKVLDGDIDEYLEASLKSGL 403
>gi|383188744|ref|YP_005198872.1| peptide chain release factor 2 [Rahnella aquatilis CIP 78.65 = ATCC
33071]
gi|371587002|gb|AEX50732.1| peptide chain release factor 2 [Rahnella aquatilis CIP 78.65 = ATCC
33071]
Length = 365
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 151/360 (41%), Positives = 233/360 (64%), Gaps = 2/360 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
K+ +++ V++ L + RL ++AEL +P++W++P A + +E SL +
Sbjct: 8 KNRIQDLSERTVVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIV 67
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
+ + Q + +++LA E +D + E++ L + K ++ E + SGE D S
Sbjct: 68 ETIDELLQGAEDVTGLLELAVEADDEDTFNETVAELDVLTAKLEQLEFRRMFSGEYDSAS 127
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
CY+++QAG+GGTE+ DWASM+L+MY WA+ +G++ +++E GE+AG+K ATIK+ G+Y
Sbjct: 128 CYLDIQAGSGGTEAQDWASMLLRMYLRWAEAKGFKTEVIEESDGEVAGLKSATIKIIGDY 187
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
AFG+ + E GVHRLVR SPFDSG RRHTSF++ V P D ++IN +DLRI+ +R+
Sbjct: 188 AFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEV-DDDIEIEINPADLRIDVYRA 246
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQM 385
GAGGQH N T+SAVRI H+PT I CQN+RSQH+NK AM +++++ + E+ ++
Sbjct: 247 SGAGGQHVNKTESAVRITHLPTNIVTQCQNDRSQHKNKDQAMKQMRAKLYEYEMQKKNAD 306
Query: 386 NAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ + +DI WG+QIR+YVL R +KDLRT E + +VL+GDLD FI + L A L
Sbjct: 307 KQQLEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASLKAGL 365
>gi|385858094|ref|YP_005904606.1| peptide chain release factor 2 [Neisseria meningitidis NZ-05/33]
gi|416189439|ref|ZP_11615352.1| peptide chain release factor 2 [Neisseria meningitidis M0579]
gi|325135363|gb|EGC57984.1| peptide chain release factor 2 [Neisseria meningitidis M0579]
gi|325208983|gb|ADZ04435.1| peptide chain release factor 2 [Neisseria meningitidis NZ-05/33]
Length = 367
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 152/343 (44%), Positives = 223/343 (65%), Gaps = 2/343 (0%)
Query: 99 IKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEH 158
I+ + ++ RL + P LW+DP A I +E L G + + + ++
Sbjct: 23 IRVYMDYQGKKDRLEEVVGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIATGIEDN 82
Query: 159 IDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTE 218
+I++ EEND E E + + ++ + E + + DP +C+I++ AGAGGTE
Sbjct: 83 RMLIEMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTE 142
Query: 219 SMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHR 278
+ DWA M+ +MY +A+R+G+++ +++E GEIAGI RATI+V+GEYA+G + E GVHR
Sbjct: 143 AEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHR 202
Query: 279 LVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDS 338
LVR SPFDS +RHTSFA+V V P D S ++IN +DLRI+ +R+ GAGGQH N TDS
Sbjct: 203 LVRYSPFDSNNKRHTSFASVFVYPEI-DDSIEIEINPADLRIDTYRASGAGGQHINKTDS 261
Query: 339 AVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISW 398
AVRI H PTGI CQN+RSQH NKA+AM +L+S++ +LE+ ++ + + +D+ W
Sbjct: 262 AVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGW 321
Query: 399 GNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
G+QIR+YVL R +KDLRT YEV + +VL+GDLDGFI + L
Sbjct: 322 GSQIRSYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 363
>gi|313144782|ref|ZP_07806975.1| peptide chain release factor 2 [Helicobacter cinaedi CCUG 18818]
gi|386761011|ref|YP_006234646.1| peptide chain release factor 2 [Helicobacter cinaedi PAGU611]
gi|313129813|gb|EFR47430.1| peptide chain release factor 2 [Helicobacter cinaedi CCUG 18818]
gi|385146027|dbj|BAM11535.1| peptide chain release factor 2 [Helicobacter cinaedi PAGU611]
gi|396078091|dbj|BAM31467.1| peptide chain release factor 2 [Helicobacter cinaedi ATCC BAA-847]
Length = 365
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 163/353 (46%), Positives = 233/353 (66%), Gaps = 19/353 (5%)
Query: 97 QVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGS---LMGKMKEVKAFEQ 153
Q I K L +L R++ ++A + W+D AG I++E ++ E+KA
Sbjct: 18 QNIAKILNPDSLQKRMDEINALESHQEFWNDAKKAGEITKEKRKCERILSTYTEMKA--- 74
Query: 154 ELLEHIDMIKLAREENDT---ELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEV 210
EL + ++ ++A E D+ EL E++E+L + +K E++ +LSGE D + I +
Sbjct: 75 ELDDAKELFEIAESEGDSSTLELLFENVESLQSHIQKV---EIEVMLSGEFDSSNAIITI 131
Query: 211 QAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYA 270
Q GAGGTES DWASM+ +MY W++RRG++V L+D GE AGIK A + GE A+GYA
Sbjct: 132 QPGAGGTESQDWASMLYRMYLRWSERRGFKVELLDHQDGEEAGIKGAAFIIKGENAYGYA 191
Query: 271 KAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGG 330
K+E GVHRLVRISPFD+ +RHTSFA+V V P + ++I + D+RI+ +R+ GAGG
Sbjct: 192 KSENGVHRLVRISPFDANAKRHTSFASVQVSPELSE-DIDIEILDKDIRIDTYRASGAGG 250
Query: 331 QHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQ--MNAE 388
QH N T+SA+RI H PTGI CQN+RSQH+NKA+AM +LQS++ +LE +Q++ NAE
Sbjct: 251 QHVNKTESAIRITHFPTGIVVQCQNDRSQHKNKATAMKMLQSKLYELERLKQSEGVANAE 310
Query: 389 HTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
++ I WG+QIR+YVL PY+ VKDLR+NY SD + VL+GD+D I S L
Sbjct: 311 KSE----IGWGHQIRSYVLAPYQQVKDLRSNYATSDTEGVLDGDIDDLIESVL 359
>gi|398877441|ref|ZP_10632586.1| peptide chain release factor 2 [Pseudomonas sp. GM67]
gi|398202336|gb|EJM89182.1| peptide chain release factor 2 [Pseudomonas sp. GM67]
Length = 403
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 151/335 (45%), Positives = 221/335 (65%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++ EL P++W+ P +A + RE +L + + L + D++ +A EEND
Sbjct: 71 RLTEVNRELEDPSVWNKPEYAQELGRERSALAQIVDTLDELNTGLADCRDLLDMAVEEND 130
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
+ + L + + E + S E+DP + Y+++QAG+GGTE+ DWA+++L+MY
Sbjct: 131 EGAVGDVVAELARLEENLAKLEFRRMFSHEMDPNNAYLDIQAGSGGTEAQDWANILLRMY 190
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA +RG+ T+M+ GE+AGIK AT+ + GEYAFG+ + E+GVHRLVR SPFDSG R
Sbjct: 191 LRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGNR 250
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSF+AV V P D ++IN +DLRI+ +RS GAGGQH NTTDSAVRI H+PT
Sbjct: 251 RHTSFSAVFVSPEI-DDKVEIEINPADLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTV 309
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
+CQNERSQH NK +AM +L++++ + E+ ++ + + +DI WG+QIR+YVL
Sbjct: 310 VSCQNERSQHANKDTAMKMLRAKLYEQEMQKRNAASQALEDTKSDIGWGHQIRSYVLDAS 369
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRTN E SD D VL+GD+D ++ + L + L
Sbjct: 370 R-IKDLRTNIERSDCDKVLDGDIDEYLEASLKSGL 403
>gi|255020528|ref|ZP_05292592.1| peptide chain release factor 2 [Acidithiobacillus caldus ATCC
51756]
gi|254970048|gb|EET27546.1| peptide chain release factor 2 [Acidithiobacillus caldus ATCC
51756]
Length = 349
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 155/336 (46%), Positives = 220/336 (65%), Gaps = 4/336 (1%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL + E P LW+DP A + RE L ++ ++ +Q+L + +M++LA E D
Sbjct: 17 RLEEVQLESEDPKLWEDPERAQALERERTQLEAVVRPLQELDQKLRDSAEMVELAVAEQD 76
Query: 171 TELELESLEALLTMRRKSKEK-ELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
L LE++ L R + EK E + SG D ++++QAGAGGTE+ DWA+M+L+M
Sbjct: 77 EAL-LEAVAGDLEAARATVEKLEFQRMFSGPQDGADAFVDIQAGAGGTEAQDWANMLLRM 135
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y W + RG+ L++ GE+AGIK A++ V G++AFG+ + E GVHRLVR SPFDSG
Sbjct: 136 YLHWCEARGFSTELVEVSEGEVAGIKSASLHVRGDHAFGWLRTETGVHRLVRKSPFDSGN 195
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RRHTSFA+V V P D S ++IN +DL+++ +R+ GAGGQH N TDSAVR+ HIPTGI
Sbjct: 196 RRHTSFASVFVYPEI-DDSFEIEINPADLKVDTYRASGAGGQHVNKTDSAVRLTHIPTGI 254
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHP 409
CQ +RSQH+N+A AM +L+S++ +LE+ ++ + +DI WG+QIR+YVL
Sbjct: 255 VVACQTDRSQHKNRAEAMRMLRSKLYELEMQKRNAEKQALEDTKSDIGWGHQIRSYVLDQ 314
Query: 410 YRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT EV D VL+GDLDGF+ + L A L
Sbjct: 315 SR-IKDLRTGVEVGDTQRVLDGDLDGFVEAALKAGL 349
>gi|409399832|ref|ZP_11250047.1| peptide chain release factor 2 [Acidocella sp. MX-AZ02]
gi|409131060|gb|EKN00785.1| peptide chain release factor 2 [Acidocella sp. MX-AZ02]
Length = 322
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 148/310 (47%), Positives = 214/310 (69%), Gaps = 1/310 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + V A E E + +++I+LA E D + + L L + +KEKE+++
Sbjct: 2 RERNRLASMVDGVNAIETETKDTLELIELAEAEGDEGMVKDGLATLERLAATAKEKEIES 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D +IE+ AGAGGTE+ DWA M+ +MY WA+R+G++ +M+E GE AGIK
Sbjct: 62 LLSGEADSRDAFIEINAGAGGTEAQDWAQMLARMYLRWAERKGFKTEIMEESEGEQAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
TI++ G A+G+ K E GVHRLVRISPFD+ RR TSFA+V V P D + ++IN
Sbjct: 122 SMTIQIFGTNAYGWLKTEAGVHRLVRISPFDANARRQTSFASVWVYPVV-DDTIEIEINP 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
+DL+++ FR+ GAGGQH N T+SA+RI HIPTGI CQ +RSQH+N+A+AM +L++R+
Sbjct: 181 ADLKVDTFRASGAGGQHVNKTESAIRITHIPTGIVVACQTDRSQHRNRATAMNMLKARMY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ ++ +A + TDI WG+QIR+YVL PY++VKDLR+N+E +P +VL+G LD
Sbjct: 241 EQELQKREAASAATEAAKTDIGWGHQIRSYVLAPYQLVKDLRSNHESGNPAAVLDGALDP 300
Query: 436 FILSYLSASL 445
F+ S L+A +
Sbjct: 301 FLASSLAARV 310
>gi|157162351|ref|YP_001459669.1| peptide chain release factor 2 [Escherichia coli HS]
gi|166977373|sp|A8A432.1|RF2_ECOHS RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|157068031|gb|ABV07286.1| peptide chain release factor 2 [Escherichia coli HS]
Length = 365
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 152/348 (43%), Positives = 225/348 (64%), Gaps = 2/348 (0%)
Query: 98 VIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLE 157
V++ L + RL ++AEL +P++W++P A + +E SL + + +Q L +
Sbjct: 20 VLRGYLCYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLED 79
Query: 158 HIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGT 217
+++LA E +D E E++ L + K + E + SGE D CY+++QAG+GGT
Sbjct: 80 VSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGT 139
Query: 218 ESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVH 277
E+ DWASM+ +MY WA+ RG++ +++E GE+AGIK TIK+ G+YA+G+ + E GVH
Sbjct: 140 EAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVH 199
Query: 278 RLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTD 337
RLVR SPFDSG RRHTSF++ V P D ++IN +DLRI+ +R+ GAGGQH N T+
Sbjct: 200 RLVRKSPFDSGGRRHTSFSSAFVYPEV-DDDIDIEINPADLRIDVYRASGAGGQHVNRTE 258
Query: 338 SAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDIS 397
SAVRI HIPTGI CQN+RSQH+NK AM +++++ +LE+ ++ + +DI
Sbjct: 259 SAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIG 318
Query: 398 WGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
WG+QIR+YVL R +KDLRT E + +VL+G LD FI + L A L
Sbjct: 319 WGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL 365
>gi|398834200|ref|ZP_10592061.1| peptide chain release factor 2 [Herbaspirillum sp. YR522]
gi|398220562|gb|EJN07008.1| peptide chain release factor 2 [Herbaspirillum sp. YR522]
Length = 337
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 146/331 (44%), Positives = 224/331 (67%), Gaps = 2/331 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
+L ++AEL PN+W+D A + +E SL + + + EL + D+ +AREE D
Sbjct: 5 KLEQVNAELEDPNVWNDQKRAQDLGKEKKSLEAIVHTLIKIDSELGDARDLFDMAREEKD 64
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
+ + T+R+ +E E + SG++D +C+I++QAGAGGTE+ DWASM+L+ Y
Sbjct: 65 DDTLVAIEGDADTLRKLVEEMEFRRMFSGQMDANNCFIDIQAGAGGTEAQDWASMLLRQY 124
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
+ +R+G++ ++++ GE+AGIK ATIKV+G+YA+G+ + E GVHRLVR SPFDS
Sbjct: 125 LRYCERKGFKAEILEQSDGEVAGIKTATIKVEGDYAYGFLRTETGVHRLVRKSPFDSSNG 184
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSF+++ V P D S ++IN +D+R++ +R+ GAGGQH N TDSAVR+ H P+GI
Sbjct: 185 RHTSFSSLFVYPEV-DESFDIEINPADVRVDTYRASGAGGQHINKTDSAVRLTHAPSGIV 243
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+N+A A +L+S++ +LE+ ++ + S TD+ WG+QIR+YVL
Sbjct: 244 VQCQNDRSQHRNRAEAWEMLKSKLFELELRKRMSEQQKLEDSKTDVGWGHQIRSYVLDQS 303
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
R +KDLRTN+E + +VL+GD+D FI + L
Sbjct: 304 R-IKDLRTNFETGNTKAVLDGDIDDFIAASL 333
>gi|50119718|ref|YP_048885.1| peptide chain release factor 2 [Pectobacterium atrosepticum
SCRI1043]
gi|81646129|sp|Q6D946.1|RF2_ERWCT RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|49610244|emb|CAG73687.1| putative peptide chain release factor 2 [Pectobacterium
atrosepticum SCRI1043]
Length = 365
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 152/360 (42%), Positives = 229/360 (63%), Gaps = 2/360 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
K+ +A+ V++ L + RL ++AEL +P++W++P A + +E SL +
Sbjct: 8 KNRIQDLAERSAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIV 67
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
+ Q L + +++LA EE+D + E+ L + K + E + SGE D
Sbjct: 68 DTIDQLAQGLEDVTGLLELAVEEDDEDTFNETSAELDVLENKLGQLEFRRMFSGEYDSAD 127
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
CY+++QAG+GGTE+ DWASM+++MY WA+ +G++ +++E G++AG K ATIK+ G+Y
Sbjct: 128 CYLDIQAGSGGTEAQDWASMLVRMYLRWAEAKGFKTEIIEESDGDVAGTKSATIKIIGDY 187
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
AFG+ + E GVHRLVR SPFDSG RRHTSF++ V P D ++IN +DLRI+ +R+
Sbjct: 188 AFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEV-DDDIDIEINPADLRIDVYRA 246
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQM 385
GAGGQH N T+SAVRI H+PT I CQN+RSQH+NK AM L++++ + E+ ++
Sbjct: 247 SGAGGQHVNRTESAVRITHLPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAE 306
Query: 386 NAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ +DI WG+QIR+YVL R +KDLRT E + +VL+GDLD FI + L A L
Sbjct: 307 KQVMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASLKAGL 365
>gi|433522855|ref|ZP_20479533.1| peptide chain release factor 2 [Neisseria meningitidis 61103]
gi|432257007|gb|ELL12313.1| peptide chain release factor 2 [Neisseria meningitidis 61103]
Length = 374
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 149/320 (46%), Positives = 215/320 (67%), Gaps = 2/320 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
P LW+DP A I +E L G + + + ++ +I++ EEND E E +
Sbjct: 46 PELWNDPKRAQEIGKERKILEGIVLTLDNIATGIEDNRMLIEMTVEENDEEGFAAVQEDV 105
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
+ ++ + E + + DP +C+I++ AGAGGTE+ DWA M+ +MY +A+R+G+++
Sbjct: 106 AGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDWAGMLFRMYSRYAERKGFKI 165
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
+++E GEIAGI RATI+V+GEYA+G + E GVHRLVR SPFDS +RHTSFA+V V
Sbjct: 166 EILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRYSPFDSNNKRHTSFASVFVY 225
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D S ++IN +DLRI+ +R+ GAGGQH N TDSAVRI H PTGI CQN+RSQH
Sbjct: 226 PEI-DDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGIVVQCQNDRSQHA 284
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
NKA+AM +L+S++ +LE+ ++ + + +D+ WG+QIR+YVL R +KDLRT YE
Sbjct: 285 NKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIRSYVLDSSR-IKDLRTGYE 343
Query: 422 VSDPDSVLEGDLDGFILSYL 441
V + +VL+GDLDGFI + L
Sbjct: 344 VGNTKAVLDGDLDGFIEASL 363
>gi|220934633|ref|YP_002513532.1| peptide chain release factor 2 [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|219995943|gb|ACL72545.1| peptide chain release factor 2 [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 364
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 153/351 (43%), Positives = 228/351 (64%), Gaps = 4/351 (1%)
Query: 96 IQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQEL 155
+ ++ L + RL +S EL PN+W++P A + RE L + + ++ L
Sbjct: 17 VDALRGYLDYDAKRERLEEVSRELEDPNVWNNPEKAQELGRERSRLEEVVLLISRMDKAL 76
Query: 156 LEHIDMIKLAREENDTELELESLEA-LLTMRRKSKEKELDALLSGELDPCSCYIEVQAGA 214
+ D++ +A EE+D E + ++EA L + E + SGE+D + Y+++QAG+
Sbjct: 77 GDTRDLLDMAAEEDDAET-VSAVEADLANYENDVAQLEFRRMFSGEMDENNAYMDIQAGS 135
Query: 215 GGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEV 274
GGTE+ DWA+M+L+MY W +RRG++ LM+ GE+AGIK ATIK +G YA+G+ + E
Sbjct: 136 GGTEAQDWANMLLRMYLRWGERRGFKTELMEVSEGEVAGIKSATIKFEGPYAYGWLRTET 195
Query: 275 GVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHAN 334
GVHRLVR SPFDSG RRHTSFAAV V P D S ++IN +DLR++ +R+ GAGGQH N
Sbjct: 196 GVHRLVRKSPFDSGNRRHTSFAAVFVSPEV-DDSIEIEINPADLRVDTYRASGAGGQHVN 254
Query: 335 TTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLT 394
T+SA+RI H+P+G+ CQ +RSQH+N+ +AM L++++ +LE+ +Q + +
Sbjct: 255 RTESAIRITHMPSGVVVACQADRSQHKNRDTAMKQLKAKLYELELQKQNAAKQALEDTKS 314
Query: 395 DISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
DI WG+QIR+YVL R +KDLRT EV + +VL+GDLD FI + L + L
Sbjct: 315 DIGWGSQIRSYVLDQSR-IKDLRTGVEVGNTQAVLDGDLDQFIEASLKSGL 364
>gi|51597475|ref|YP_071666.1| peptide chain release factor 2 [Yersinia pseudotuberculosis IP
32953]
gi|81638630|sp|Q666T2.1|RF2_YERPS RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|51590757|emb|CAH22402.1| Peptide chain release factor 2 [Yersinia pseudotuberculosis IP
32953]
Length = 366
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 151/335 (45%), Positives = 222/335 (66%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++AEL +P++W++P A + +E +L + + EQ L + +++LA E +D
Sbjct: 34 RLEEVNAELEQPDVWNEPERAQALGKERSTLEEIVTTIDQLEQGLEDVSGLLELAVEADD 93
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
E E++ L + K + E + SGE D +CY+++QAG+GGTE+ DWASM+L+MY
Sbjct: 94 EETFNETIAELEVLDGKLGQLEFRRMFSGEYDRANCYLDLQAGSGGTEAQDWASMLLRMY 153
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA+ RG++ +++E G++AG+K AT+K+ GEYAFG+ + E GVHRLVR SPFDSG R
Sbjct: 154 LRWAESRGFKTEIIEESDGDVAGLKSATVKIIGEYAFGWLRTETGVHRLVRKSPFDSGGR 213
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSF++ V P D ++IN +DLRI+ +R+ GAGGQH N T+SAVRI HIPT I
Sbjct: 214 RHTSFSSAFVYPEV-DDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIV 272
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+NK AM L++++ + E+ ++ + +DI WG+QIR+YVL
Sbjct: 273 TQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQVLEDNKSDIGWGSQIRSYVLDDS 332
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E + +VL+GDLD FI + L A L
Sbjct: 333 R-IKDLRTGVETRNTQAVLDGDLDKFIEASLKAGL 366
>gi|219849743|ref|YP_002464176.1| hypothetical protein Cagg_2879 [Chloroflexus aggregans DSM 9485]
gi|254790911|sp|B8G607.1|RF2_CHLAD RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|219544002|gb|ACL25740.1| hypothetical protein Cagg_2879 [Chloroflexus aggregans DSM 9485]
Length = 367
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 162/369 (43%), Positives = 238/369 (64%), Gaps = 20/369 (5%)
Query: 90 AAIAQSIQVIKKRLQWKNLNVRLNL---------LSAELNKPNLWDDPVHAGRISREHGS 140
A + + ++ I++R + NL L+L L + P LW+ P R+++E
Sbjct: 3 AELHEELETIRER--FANLRGHLDLAAKQAEIEQLEVRASDPELWNTP----RVAQELMQ 56
Query: 141 LMGKMKEVKAFEQELLEHI----DMIKLAREENDTELELESLEALLTMRRKSKEKELDAL 196
+ ++KE A +L + ++I+LA +E D L + L ++R+ ++EL+ L
Sbjct: 57 RLTRLKEEVALWNDLDHRMTSLAELIELAEQEGDESLAADLAAELRAVQREVAQRELEIL 116
Query: 197 LSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKR 256
LSG D ++ +QAG GGT++ DWA+M+L+MY WA+RRGY V L+D GE AGIK
Sbjct: 117 LSGPYDDRDAFLSIQAGMGGTDAQDWAAMLLRMYTRWAERRGYTVNLIDLSEGEEAGIKS 176
Query: 257 ATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINES 316
ATI++ G YA+GYA+AE GVHRL+R+SPF++ R TSFA V V+P D + V+I
Sbjct: 177 ATIEIRGPYAYGYARAEAGVHRLIRLSPFNAAHTRQTSFARVEVMPEV-DDAPEVEIKPE 235
Query: 317 DLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQ 376
DLRI+ FRSGG GGQ NTTDSAVRI H+PTGI TCQNERSQ QN+ +A+ VL++R+ +
Sbjct: 236 DLRIDVFRSGGHGGQGVNTTDSAVRITHLPTGIVVTCQNERSQIQNRETALRVLRARLLE 295
Query: 377 LEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGF 436
E+ RQA+ A + ++GNQ+RTY LHP +VKD RT+YE S+ +VL+G++D F
Sbjct: 296 RELQRQAEERARLRGEYREAAFGNQMRTYYLHPSTLVKDHRTDYETSNVQAVLDGEIDPF 355
Query: 437 ILSYLSASL 445
I ++L A++
Sbjct: 356 IEAFLRANV 364
>gi|28373662|pdb|1MI6|A Chain A, Docking Of The Modified Rf2 X-Ray Structure Into The Low
Resolution Cryo-Em Map Of Rf2 E.Coli 70s Ribosome
Length = 365
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 151/348 (43%), Positives = 225/348 (64%), Gaps = 2/348 (0%)
Query: 98 VIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLE 157
V++ L + RL ++AEL +P++W++P A + +E SL + + +Q L +
Sbjct: 20 VLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLED 79
Query: 158 HIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGT 217
+++LA E +D E E++ L + K + E + SGE D CY+++QAG+GGT
Sbjct: 80 VSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGT 139
Query: 218 ESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVH 277
E+ DWASM+ +MY WA+ RG++ +++E GE+AGIK TIK+ G+YA+G+ + E GVH
Sbjct: 140 EAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVH 199
Query: 278 RLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTD 337
RLVR SPFDSG RRHTSF++ V P D ++IN +DLRI+ +R+ GAGGQH N T+
Sbjct: 200 RLVRKSPFDSGGRRHTSFSSAFVYPEV-DDDIDIEINPADLRIDVYRASGAGGQHVNRTE 258
Query: 338 SAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDIS 397
SAVRI HIPTGI CQN+RSQH+NK AM +++++ ++E+ ++ + +DI
Sbjct: 259 SAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYEVEMQKKNAEKQAMEDNKSDIG 318
Query: 398 WGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
WG+QIR+YVL R +KDLRT E + +VL+G LD FI + L A L
Sbjct: 319 WGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL 365
>gi|147569|gb|AAA24520.1| peptide chain release factor 2 [Escherichia coli]
Length = 365
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 151/348 (43%), Positives = 225/348 (64%), Gaps = 2/348 (0%)
Query: 98 VIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLE 157
V++ L + RL ++AEL +P++W++P A + +E SL + + +Q L +
Sbjct: 20 VLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLED 79
Query: 158 HIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGT 217
+++LA E +D E E++ L + K + E + SGE D CY+++QAG+GGT
Sbjct: 80 VSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGT 139
Query: 218 ESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVH 277
E+ DWASM+ +MY WA+ RG++ +++E GE+AGIK TIK+ G+YA+G+ + E GVH
Sbjct: 140 EAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVH 199
Query: 278 RLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTD 337
R+VR SPFDSG RRHTSF++ V P D ++IN +DLRI+ +R+ GAGGQH N T+
Sbjct: 200 RVVRKSPFDSGGRRHTSFSSAFVYPEV-DDDIDIEINPADLRIDVYRTSGAGGQHVNRTE 258
Query: 338 SAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDIS 397
SAVRI HIPTGI CQN+RSQH+NK AM +++++ +LE+ ++ + +DI
Sbjct: 259 SAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIG 318
Query: 398 WGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
WG+QIR+YVL R +KDLRT E + +VL+G LD FI + L A L
Sbjct: 319 WGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL 365
>gi|24638154|sp|Q8ZHK4.1|RF2_YERPE RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|115346673|emb|CAL19556.1| peptide chain release factor 2 [Yersinia pestis CO92]
Length = 366
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 151/335 (45%), Positives = 222/335 (66%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++AEL +P++W++P A + +E +L + + EQ L + +++LA E +D
Sbjct: 34 RLEEVNAELEQPDVWNEPERAQALGKERSTLEEIVTTIDQLEQGLEDVSGLLELAVEADD 93
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
E E++ L + K + E + SGE D +CY+++QAG+GGTE+ DWASM+L+MY
Sbjct: 94 EETFNETIAELEVLDGKLGQLEFRRMFSGEYDRANCYLDLQAGSGGTEAQDWASMLLRMY 153
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA+ RG++ +++E G++AG+K AT+K+ GEYAFG+ + E GVHRLVR SPFDSG R
Sbjct: 154 LRWAESRGFKTEIIEESDGDVAGLKSATVKIIGEYAFGWLRTETGVHRLVRKSPFDSGGR 213
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSF++ V P D ++IN +DLRI+ +R+ GAGGQH N T+SAVRI HIPT I
Sbjct: 214 RHTSFSSAFVYPEV-DDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIV 272
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+NK AM L++++ + E+ ++ + +DI WG+QIR+YVL
Sbjct: 273 TQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQVLEDNKSDIGWGSQIRSYVLDDS 332
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E + +VL+GDLD FI + L A L
Sbjct: 333 R-IKDLRTGVETRNTQAVLDGDLDKFIEASLKAGL 366
>gi|397661636|ref|YP_006502336.1| peptide chain release factor 2 [Taylorella equigenitalis ATCC
35865]
gi|394349815|gb|AFN35729.1| peptide chain release factor 2 [Taylorella equigenitalis ATCC
35865]
Length = 327
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 158/328 (48%), Positives = 218/328 (66%), Gaps = 10/328 (3%)
Query: 118 ELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELES 177
EL PN+W+DP A +S+E SL + + EQ + + D+ LA E+ND +
Sbjct: 2 ELEDPNIWNDPEKAQSLSKEKKSLEDVVIVLSELEQSIRDSKDLYTLALEDNDDS----T 57
Query: 178 LEALLTMRRKSKEK----ELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSW 233
L A+ +K EK E + S DP +C+I++Q GAGGTE+ DWASM+L+ Y +
Sbjct: 58 LIAIEEDSKKYLEKIEGLEFRRMFSQPADPLNCFIDIQFGAGGTEAQDWASMLLRQYLRY 117
Query: 234 AQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHT 293
+R+G++ +++E G++AGIK ATIKV+G+YAFG + E GVHRLVR SPFDS RHT
Sbjct: 118 CERKGFKTEVLEESAGDVAGIKSATIKVEGDYAFGLLRTESGVHRLVRKSPFDSVNGRHT 177
Query: 294 SFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATC 353
SFA++ V P D S V IN +DLRI+ +R+ GAGGQH N TDSAVRI H PTGI C
Sbjct: 178 SFASLYVYPEI-DDSIEVDINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGIVVQC 236
Query: 354 QNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMV 413
QN+RSQH+NKA AM +L+S++ +LE+ ++ + +S +D+ WG+QIR+YVL R +
Sbjct: 237 QNDRSQHRNKAEAMSMLKSKLYELELRKRMAEQQKLEESKSDVGWGHQIRSYVLDQSR-I 295
Query: 414 KDLRTNYEVSDPDSVLEGDLDGFILSYL 441
KDLRTN EVS+ VL+GDLD FI + L
Sbjct: 296 KDLRTNVEVSNTQKVLDGDLDMFIEASL 323
>gi|121635783|ref|YP_976028.1| peptide chain release factor 2 [Neisseria meningitidis FAM18]
gi|261378556|ref|ZP_05983129.1| peptide chain release factor 2 [Neisseria cinerea ATCC 14685]
gi|304388773|ref|ZP_07370830.1| peptide chain release factor RF2 [Neisseria meningitidis ATCC
13091]
gi|385325066|ref|YP_005879505.1| peptide chain release factor II (RF-2) [Neisseria meningitidis
8013]
gi|385329369|ref|YP_005883672.1| peptide chain release factor 2 [Neisseria meningitidis alpha710]
gi|416180255|ref|ZP_11611396.1| peptide chain release factor 2 [Neisseria meningitidis M6190]
gi|421539101|ref|ZP_15985272.1| peptide chain release factor 2 [Neisseria meningitidis 93003]
gi|421539173|ref|ZP_15985340.1| peptide chain release factor 2 [Neisseria meningitidis 93004]
gi|421543390|ref|ZP_15989485.1| peptide chain release factor 2 [Neisseria meningitidis NM255]
gi|421545462|ref|ZP_15991525.1| peptide chain release factor 2 [Neisseria meningitidis NM140]
gi|421547513|ref|ZP_15993548.1| peptide chain release factor 2 [Neisseria meningitidis NM183]
gi|421549545|ref|ZP_15995558.1| peptide chain release factor 2 [Neisseria meningitidis NM2781]
gi|421551733|ref|ZP_15997718.1| peptide chain release factor 2 [Neisseria meningitidis NM576]
gi|421555908|ref|ZP_16001832.1| peptide chain release factor 2 [Neisseria meningitidis 98008]
gi|421562163|ref|ZP_16007999.1| peptide chain release factor 2 [Neisseria meningitidis NM2657]
gi|421562220|ref|ZP_16008050.1| peptide chain release factor 2 [Neisseria meningitidis NM2795]
gi|421907781|ref|ZP_16337650.1| Peptide chain release factor 1 RF-1 [Neisseria meningitidis
alpha704]
gi|433468133|ref|ZP_20425579.1| peptide chain release factor 2 [Neisseria meningitidis 87255]
gi|433474464|ref|ZP_20431816.1| peptide chain release factor 2 [Neisseria meningitidis 97021]
gi|433482900|ref|ZP_20440148.1| peptide chain release factor 2 [Neisseria meningitidis 2006087]
gi|433485018|ref|ZP_20442230.1| peptide chain release factor 2 [Neisseria meningitidis 2002038]
gi|433487145|ref|ZP_20444330.1| peptide chain release factor 2 [Neisseria meningitidis 97014]
gi|433493572|ref|ZP_20450653.1| peptide chain release factor 2 [Neisseria meningitidis NM586]
gi|433495624|ref|ZP_20452681.1| peptide chain release factor 2 [Neisseria meningitidis NM762]
gi|433497692|ref|ZP_20454717.1| peptide chain release factor 2 [Neisseria meningitidis M7089]
gi|433499738|ref|ZP_20456739.1| peptide chain release factor 2 [Neisseria meningitidis M7124]
gi|433501807|ref|ZP_20458786.1| peptide chain release factor 2 [Neisseria meningitidis NM174]
gi|433503842|ref|ZP_20460793.1| peptide chain release factor 2 [Neisseria meningitidis NM126]
gi|433537744|ref|ZP_20494235.1| peptide chain release factor 2 [Neisseria meningitidis 77221]
gi|166225113|sp|A1KWK6.1|RF2_NEIMF RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|120867489|emb|CAM11266.1| peptide chain release factor 2 [Neisseria meningitidis FAM18]
gi|254671300|emb|CBA08663.1| peptide chain release factor RF-2 [Neisseria meningitidis alpha153]
gi|261393453|emb|CAX51098.1| peptide chain release factor II (RF-2) [Neisseria meningitidis
8013]
gi|269145108|gb|EEZ71526.1| peptide chain release factor 2 [Neisseria cinerea ATCC 14685]
gi|304337265|gb|EFM03442.1| peptide chain release factor RF2 [Neisseria meningitidis ATCC
13091]
gi|308390220|gb|ADO32540.1| peptide chain release factor 2 [Neisseria meningitidis alpha710]
gi|325131224|gb|EGC53936.1| peptide chain release factor 2 [Neisseria meningitidis M6190]
gi|393291096|emb|CCI73657.1| Peptide chain release factor 1 RF-1 [Neisseria meningitidis
alpha704]
gi|402315036|gb|EJU50603.1| peptide chain release factor 2 [Neisseria meningitidis NM255]
gi|402315213|gb|EJU50779.1| peptide chain release factor 2 [Neisseria meningitidis 93003]
gi|402320823|gb|EJU56304.1| peptide chain release factor 2 [Neisseria meningitidis NM183]
gi|402321009|gb|EJU56489.1| peptide chain release factor 2 [Neisseria meningitidis NM140]
gi|402322449|gb|EJU57909.1| peptide chain release factor 2 [Neisseria meningitidis 93004]
gi|402323252|gb|EJU58698.1| peptide chain release factor 2 [Neisseria meningitidis NM2781]
gi|402328464|gb|EJU63834.1| peptide chain release factor 2 [Neisseria meningitidis 98008]
gi|402333294|gb|EJU68600.1| peptide chain release factor 2 [Neisseria meningitidis NM576]
gi|402335552|gb|EJU70817.1| peptide chain release factor 2 [Neisseria meningitidis NM2657]
gi|402343348|gb|EJU78495.1| peptide chain release factor 2 [Neisseria meningitidis NM2795]
gi|432200448|gb|ELK56539.1| peptide chain release factor 2 [Neisseria meningitidis 87255]
gi|432207120|gb|ELK63115.1| peptide chain release factor 2 [Neisseria meningitidis 97021]
gi|432213558|gb|ELK69474.1| peptide chain release factor 2 [Neisseria meningitidis 2006087]
gi|432218621|gb|ELK74475.1| peptide chain release factor 2 [Neisseria meningitidis 2002038]
gi|432219790|gb|ELK75625.1| peptide chain release factor 2 [Neisseria meningitidis 97014]
gi|432225632|gb|ELK81373.1| peptide chain release factor 2 [Neisseria meningitidis NM586]
gi|432227010|gb|ELK82725.1| peptide chain release factor 2 [Neisseria meningitidis NM762]
gi|432231631|gb|ELK87290.1| peptide chain release factor 2 [Neisseria meningitidis M7089]
gi|432232421|gb|ELK88066.1| peptide chain release factor 2 [Neisseria meningitidis M7124]
gi|432232808|gb|ELK88444.1| peptide chain release factor 2 [Neisseria meningitidis NM174]
gi|432238116|gb|ELK93692.1| peptide chain release factor 2 [Neisseria meningitidis NM126]
gi|432270493|gb|ELL25631.1| peptide chain release factor 2 [Neisseria meningitidis 77221]
Length = 367
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 149/320 (46%), Positives = 215/320 (67%), Gaps = 2/320 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
P LW+DP A I +E L G + + + ++ +I++ EEND E E +
Sbjct: 46 PELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLIEMTVEENDEEGFAAVQEDV 105
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
+ ++ + E + + DP +C+I++ AGAGGTE+ DWA M+ +MY +A+R+G+++
Sbjct: 106 AGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDWAGMLFRMYSRYAERKGFKI 165
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
+++E GEIAGI RATI+V+GEYA+G + E GVHRLVR SPFDS +RHTSFA+V V
Sbjct: 166 EILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRYSPFDSNNKRHTSFASVFVY 225
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D S ++IN +DLRI+ +R+ GAGGQH N TDSAVRI H PTGI CQN+RSQH
Sbjct: 226 PEI-DDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGIVVQCQNDRSQHA 284
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
NKA+AM +L+S++ +LE+ ++ + + +D+ WG+QIR+YVL R +KDLRT YE
Sbjct: 285 NKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIRSYVLDSSR-IKDLRTGYE 343
Query: 422 VSDPDSVLEGDLDGFILSYL 441
V + +VL+GDLDGFI + L
Sbjct: 344 VGNTKAVLDGDLDGFIEASL 363
>gi|56964831|ref|YP_176562.1| peptide chain release factor 2 [Bacillus clausii KSM-K16]
gi|56911074|dbj|BAD65601.1| peptide chain release factor 2 [Bacillus clausii KSM-K16]
Length = 328
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 151/324 (46%), Positives = 210/324 (64%), Gaps = 1/324 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
P+ W+D A I E L ++ K + + +L REE+DTEL E L
Sbjct: 4 PDFWNDQEQAQAIINETNGLKEQVHTFKDMAESYDDLEVSYELVREEDDTELASELESGL 63
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
+++K + EL LLS D + +E+ GAGGTES DWASM+L+MY WA++RG+ V
Sbjct: 64 AALKQKMNQFELQLLLSAPYDKNNAILELHPGAGGTESQDWASMLLRMYTRWAEKRGFAV 123
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
+D +PGE AG+K T+ + G A+GY KAE GVHRLVRISPFDS RRHTSF + V+
Sbjct: 124 ETLDYLPGEEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVM 183
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D + +++N DL+I+ +R+ GAGGQH NTTDSAVRI H+PT TCQ+ERSQ +
Sbjct: 184 PEL-DDAVDIELNSEDLKIDTYRASGAGGQHVNTTDSAVRITHLPTNTVVTCQSERSQIK 242
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
N+ AM ++++++ QL I Q + AE +I WG+QIR+YV HPY MVKD RT +E
Sbjct: 243 NREQAMKMMKAKLYQLRIEEQERELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTGFE 302
Query: 422 VSDPDSVLEGDLDGFILSYLSASL 445
+ + +SV++G++DGFI +YL SL
Sbjct: 303 IGNTNSVMDGEIDGFIDAYLRQSL 326
>gi|385856145|ref|YP_005902658.1| peptide chain release factor 2 [Neisseria meningitidis M01-240355]
gi|416175157|ref|ZP_11609418.1| peptide chain release factor 2 [Neisseria meningitidis OX99.30304]
gi|416185221|ref|ZP_11613395.1| peptide chain release factor 2 [Neisseria meningitidis M13399]
gi|325129251|gb|EGC52090.1| peptide chain release factor 2 [Neisseria meningitidis OX99.30304]
gi|325133309|gb|EGC55975.1| peptide chain release factor 2 [Neisseria meningitidis M13399]
gi|325205086|gb|ADZ00540.1| peptide chain release factor 2 [Neisseria meningitidis M01-240355]
Length = 341
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 149/320 (46%), Positives = 215/320 (67%), Gaps = 2/320 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
P LW+DP A I +E L G + + + ++ +I++ EEND E E +
Sbjct: 20 PELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLIEMTVEENDEEGFAAVQEDV 79
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
+ ++ + E + + DP +C+I++ AGAGGTE+ DWA M+ +MY +A+R+G+++
Sbjct: 80 AGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDWAGMLFRMYSRYAERKGFKI 139
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
+++E GEIAGI RATI+V+GEYA+G + E GVHRLVR SPFDS +RHTSFA+V V
Sbjct: 140 EILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRYSPFDSNNKRHTSFASVFVY 199
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D S ++IN +DLRI+ +R+ GAGGQH N TDSAVRI H PTGI CQN+RSQH
Sbjct: 200 PEI-DDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGIVVQCQNDRSQHA 258
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
NKA+AM +L+S++ +LE+ ++ + + +D+ WG+QIR+YVL R +KDLRT YE
Sbjct: 259 NKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIRSYVLDSSR-IKDLRTGYE 317
Query: 422 VSDPDSVLEGDLDGFILSYL 441
V + +VL+GDLDGFI + L
Sbjct: 318 VGNTKAVLDGDLDGFIEASL 337
>gi|404497221|ref|YP_006721327.1| peptide chain release factor 2 [Geobacter metallireducens GS-15]
gi|403378100|gb|ABB32591.2| peptide chain release factor 2 [Geobacter metallireducens GS-15]
Length = 372
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 159/332 (47%), Positives = 213/332 (64%), Gaps = 11/332 (3%)
Query: 115 LSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHID----MIKLAREEND 170
+ A + P WDD A ++ RE +++++ L D +I+L E D
Sbjct: 35 MEAHIAAPGFWDDNEKAQQLLRERT----RIEKILELWDRLTRQADDIRVLIELGEEAGD 90
Query: 171 TELELESLEALLTMRRKSKE-KELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
E L+ + AL K E E +LSG D +CY + AGAGGTE+ DWA M+L+M
Sbjct: 91 -EGTLDEVRALNDQLEKDVEGAEFQRMLSGTHDKNACYFSINAGAGGTEAQDWAEMLLRM 149
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y + +R+G++ + D G+ AG+K AT VDGEYA+GY KAE G+HRLVRISPFDS
Sbjct: 150 YLRYCERKGWKTEITDYQGGDEAGVKSATFTVDGEYAYGYLKAEAGIHRLVRISPFDSNA 209
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RRHTSFA+V P D V INE+DLRI+ +RS GAGGQH NTTDSAVRI HIPTG+
Sbjct: 210 RRHTSFASVFAFPEIEDD-IEVTINEADLRIDTYRSSGAGGQHVNTTDSAVRITHIPTGL 268
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHP 409
A Q ERSQH NKA+AM +L++++ + E+ + AE +I WG+QIR+YVLHP
Sbjct: 269 VAASQCERSQHMNKATAMKMLRAKLYEKELQEREAKAAEIGGEKKEIGWGSQIRSYVLHP 328
Query: 410 YRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
Y+MVKDLRT E +PD+VL+GDL+ FI+++L
Sbjct: 329 YKMVKDLRTGVETGNPDAVLDGDLEEFIVAFL 360
>gi|375107033|ref|ZP_09753294.1| peptide chain release factor 2 [Burkholderiales bacterium
JOSHI_001]
gi|374667764|gb|EHR72549.1| peptide chain release factor 2 [Burkholderiales bacterium
JOSHI_001]
Length = 367
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 149/356 (41%), Positives = 230/356 (64%), Gaps = 2/356 (0%)
Query: 90 AAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVK 149
A +++ Q ++ L + +RLN ++A L P +W++P A + RE SL ++ +
Sbjct: 14 ADLSERTQQLRGYLDYDRKALRLNEVNAALENPAVWNEPKRAQELGREKKSLETVVETID 73
Query: 150 AFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIE 209
+ L ++ ++ ++++ + D E +R ++ E + S DP +C+I+
Sbjct: 74 HLQSNLADNTELYEMSKADGDIAGVQAMAEEAAKLRTTVEQLEFRRMFSNPADPGNCFID 133
Query: 210 VQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGY 269
+QAGAGGTE+ DWASM+L+ Y + +R+G++ L++E G++AGI+ AT+KV+G+YAFG+
Sbjct: 134 IQAGAGGTEACDWASMLLRQYLKYCERKGFKAELLEETAGDVAGIRSATLKVEGDYAFGH 193
Query: 270 AKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAG 329
+ E GVHRLVR SPFDS RHTSFA++ V P D S + IN +D+R + FR+ GAG
Sbjct: 194 LRTETGVHRLVRKSPFDSSGGRHTSFASLFVYPEV-DDSIEIDINPADVRTDTFRASGAG 252
Query: 330 GQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEH 389
GQH N TDSAVR+ HIPTGI CQN+RSQH+N+ A +L+SR+ + E+ +Q + +
Sbjct: 253 GQHINKTDSAVRLTHIPTGIVVQCQNDRSQHRNRDEAWQMLRSRLYEHEMRKQQEAQQKL 312
Query: 390 TQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ TD+ WG+QIR+YVL R +KDLRTN E+S+ VL+GDLD FI + L + L
Sbjct: 313 EDTKTDVGWGHQIRSYVLDQSR-IKDLRTNVEISNTQKVLDGDLDPFIEASLKSGL 367
>gi|387618163|ref|YP_006121185.1| peptide chain release factor 2 [Escherichia coli O83:H1 str. NRG
857C]
gi|312947424|gb|ADR28251.1| peptide chain release factor 2 [Escherichia coli O83:H1 str. NRG
857C]
Length = 357
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 150/335 (44%), Positives = 220/335 (65%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++AEL +P++W++P A + +E SL + + +Q L + +++LA E +D
Sbjct: 25 RLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSGLLELAVEADD 84
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
E E++ L + K + E + SGE D CY+++QAG+GGTE+ DWASM+ +MY
Sbjct: 85 EETFNEAVAELDVLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLERMY 144
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA+ RG++ +++E GE+AGIK TIK+ G+YA+G+ + E GVHRLVR SPFDSG R
Sbjct: 145 LRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLVRKSPFDSGGR 204
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSF++ V P D ++IN +DLRI+ +R+ GAGGQH N T+SAVRI HIPTGI
Sbjct: 205 RHTSFSSAFVYPEV-DDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTGIV 263
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+NK AM +++++ +LE+ ++ + +DI WG+QIR+YVL
Sbjct: 264 TQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQIRSYVLDDS 323
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E + +VL+G LD FI + L A L
Sbjct: 324 R-IKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL 357
>gi|307941920|ref|ZP_07657273.1| peptide chain release factor 2 [Roseibium sp. TrichSKD4]
gi|307774826|gb|EFO34034.1| peptide chain release factor 2 [Roseibium sp. TrichSKD4]
Length = 322
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 150/307 (48%), Positives = 213/307 (69%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + VK EQ+L +++++I+L E D + ++ +AL ++ K E +L +
Sbjct: 2 RERQQLDDGINGVKGLEQDLADNMELIELGELEGDQSVIKDAEDALRGLKDKVNELQLQS 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+E+ +GAGGTES DWASM+L+MY+ WA++RG++V L++ GE AGIK
Sbjct: 62 LLSGEADGNDTYLEINSGAGGTESQDWASMLLRMYRRWAEKRGFKVELLEYHDGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
AT+ + GE A+G+ K E GVHRLVRISP+DS RRHTSF++ V P D S +++NE
Sbjct: 122 SATLLIKGENAYGWMKTESGVHRLVRISPYDSNARRHTSFSSAWVYPVI-DDSIEIEVNE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD RI+ +R+ GAGGQH NTTDSAVRI H PTGI CQ+ERSQH+N+A+A +L++R+
Sbjct: 181 SDCRIDTYRASGAGGQHVNTTDSAVRITHQPTGIVVQCQSERSQHKNRATAWSMLKARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ ++ + TDI WG+QIR+YVL PY++VKDLRT E + P VL+G LD
Sbjct: 241 EQELKKREEAANAEAAGKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTSPGDVLDGALDP 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMEAALA 307
>gi|218767251|ref|YP_002341763.1| peptide chain release factor 2 [Neisseria meningitidis Z2491]
gi|385339042|ref|YP_005892915.1| peptide chain release factor II (RF-2) [Neisseria meningitidis WUE
2594]
gi|421551716|ref|ZP_15997703.1| peptide chain release factor 2 [Neisseria meningitidis 69166]
gi|421567966|ref|ZP_16013697.1| peptide chain release factor 2 [Neisseria meningitidis NM3001]
gi|433472425|ref|ZP_20429801.1| peptide chain release factor 2 [Neisseria meningitidis 68094]
gi|433476620|ref|ZP_20433951.1| peptide chain release factor 2 [Neisseria meningitidis 88050]
gi|433478750|ref|ZP_20436056.1| peptide chain release factor 2 [Neisseria meningitidis 70012]
gi|433480820|ref|ZP_20438097.1| peptide chain release factor 2 [Neisseria meningitidis 63041]
gi|433515030|ref|ZP_20471804.1| peptide chain release factor 2 [Neisseria meningitidis 2004090]
gi|433518296|ref|ZP_20475035.1| peptide chain release factor 2 [Neisseria meningitidis 96023]
gi|433518837|ref|ZP_20475566.1| peptide chain release factor 2 [Neisseria meningitidis 65014]
gi|433525061|ref|ZP_20481712.1| peptide chain release factor 2 [Neisseria meningitidis 97020]
gi|433527127|ref|ZP_20483744.1| peptide chain release factor 2 [Neisseria meningitidis 69096]
gi|433529245|ref|ZP_20485849.1| peptide chain release factor 2 [Neisseria meningitidis NM3652]
gi|433531411|ref|ZP_20487987.1| peptide chain release factor 2 [Neisseria meningitidis NM3642]
gi|433533454|ref|ZP_20490009.1| peptide chain release factor 2 [Neisseria meningitidis 2007056]
gi|433535633|ref|ZP_20492157.1| peptide chain release factor 2 [Neisseria meningitidis 2001212]
gi|433539958|ref|ZP_20496422.1| peptide chain release factor 2 [Neisseria meningitidis 70030]
gi|433539994|ref|ZP_20496453.1| peptide chain release factor 2 [Neisseria meningitidis 63006]
gi|24638158|sp|Q9JWV4.1|RF2_NEIMA RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|121051259|emb|CAM07534.1| peptide chain release factor 2 [Neisseria meningitidis Z2491]
gi|319411456|emb|CBY91871.1| peptide chain release factor II (RF-2) [Neisseria meningitidis WUE
2594]
gi|402326723|gb|EJU62122.1| peptide chain release factor 2 [Neisseria meningitidis 69166]
gi|402342911|gb|EJU78067.1| peptide chain release factor 2 [Neisseria meningitidis NM3001]
gi|432206378|gb|ELK62387.1| peptide chain release factor 2 [Neisseria meningitidis 68094]
gi|432207478|gb|ELK63468.1| peptide chain release factor 2 [Neisseria meningitidis 88050]
gi|432213030|gb|ELK68961.1| peptide chain release factor 2 [Neisseria meningitidis 70012]
gi|432213238|gb|ELK69163.1| peptide chain release factor 2 [Neisseria meningitidis 63041]
gi|432251606|gb|ELL06969.1| peptide chain release factor 2 [Neisseria meningitidis 96023]
gi|432255232|gb|ELL10562.1| peptide chain release factor 2 [Neisseria meningitidis 2004090]
gi|432256985|gb|ELL12292.1| peptide chain release factor 2 [Neisseria meningitidis 65014]
gi|432257183|gb|ELL12488.1| peptide chain release factor 2 [Neisseria meningitidis 97020]
gi|432257944|gb|ELL13236.1| peptide chain release factor 2 [Neisseria meningitidis 69096]
gi|432263200|gb|ELL18421.1| peptide chain release factor 2 [Neisseria meningitidis NM3652]
gi|432263632|gb|ELL18846.1| peptide chain release factor 2 [Neisseria meningitidis NM3642]
gi|432264446|gb|ELL19649.1| peptide chain release factor 2 [Neisseria meningitidis 2007056]
gi|432268832|gb|ELL23998.1| peptide chain release factor 2 [Neisseria meningitidis 2001212]
gi|432271003|gb|ELL26136.1| peptide chain release factor 2 [Neisseria meningitidis 70030]
gi|432278250|gb|ELL33292.1| peptide chain release factor 2 [Neisseria meningitidis 63006]
Length = 367
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 149/320 (46%), Positives = 215/320 (67%), Gaps = 2/320 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
P LW+DP A I +E L G + + + ++ +I++ EEND E E +
Sbjct: 46 PELWNDPKRAQEIGKERKILEGIVLTLDNIATGIEDNRMLIEMTVEENDEEGFAAVQEDV 105
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
+ ++ + E + + DP +C+I++ AGAGGTE+ DWA M+ +MY +A+R+G+++
Sbjct: 106 AGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDWAGMLFRMYSRYAERKGFKI 165
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
+++E GEIAGI RATI+V+GEYA+G + E GVHRLVR SPFDS +RHTSFA+V V
Sbjct: 166 EILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRYSPFDSNNKRHTSFASVFVY 225
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D S ++IN +DLRI+ +R+ GAGGQH N TDSAVRI H PTGI CQN+RSQH
Sbjct: 226 PEI-DDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGIVVQCQNDRSQHA 284
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
NKA+AM +L+S++ +LE+ ++ + + +D+ WG+QIR+YVL R +KDLRT YE
Sbjct: 285 NKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIRSYVLDSSR-IKDLRTGYE 343
Query: 422 VSDPDSVLEGDLDGFILSYL 441
V + +VL+GDLDGFI + L
Sbjct: 344 VGNTKAVLDGDLDGFIEASL 363
>gi|451811389|ref|YP_007447844.1| peptide chain release factor RF-2 [Candidatus Kinetoplastibacterium
crithidii TCC036E]
gi|451776547|gb|AGF47546.1| peptide chain release factor RF-2 [Candidatus Kinetoplastibacterium
crithidii TCC036E]
Length = 367
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 149/336 (44%), Positives = 227/336 (67%), Gaps = 4/336 (1%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++ +EL P+LW+D +A +I++E L + E+ ++ + I+M LA+ +ND
Sbjct: 35 RLKIIESELENPDLWNDHSYAQKINKEKKILEETVFELTKIHDDIEDSIEMFHLAQIDND 94
Query: 171 TELELESLEALLTMRRKSKEK-ELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
+L ++SLE+ + + +++ E E + + D +C++++Q+GAGGTE+ DWA M+++
Sbjct: 95 NQL-IKSLESNVILFKETIESLEFKRMFVNKTDSLNCFLDIQSGAGGTEAQDWAFMLMRQ 153
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y +++++G+++ +++E GEI GIK AT+K+ G Y++GY + E G+HRLVR SPFDS
Sbjct: 154 YIRYSEKKGFKIEILEESLGEIVGIKSATLKIIGNYSYGYLRTETGIHRLVRKSPFDSSN 213
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RHTSFA++ V P D S ++IN SDLRI+ +R+ GAGGQH N TDSAVRI H PTGI
Sbjct: 214 GRHTSFASIFVYPEI-DDSFEIEINPSDLRIDTYRASGAGGQHINKTDSAVRITHNPTGI 272
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHP 409
CQN+RSQH+NKA A+ +L+S++ LEI + S TD++WG+QIR+YVL
Sbjct: 273 VVQCQNDRSQHRNKAEALQILKSKLYDLEIRNRLHEKKLLEDSKTDVAWGHQIRSYVLDQ 332
Query: 410 YRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KD RTN EVS+ VL+GDLD FI S L +
Sbjct: 333 SR-IKDNRTNIEVSNTQKVLDGDLDVFIKSSLKQGI 367
>gi|359792241|ref|ZP_09295061.1| peptide chain release factor 2 [Mesorhizobium alhagi CCNWXJ12-2]
gi|359251599|gb|EHK54937.1| peptide chain release factor 2 [Mesorhizobium alhagi CCNWXJ12-2]
Length = 322
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 152/315 (48%), Positives = 214/315 (67%), Gaps = 1/315 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE SL + VK Q L ++ D+I++ EE D ++ E+ A+ ++ + K ++++
Sbjct: 2 RERQSLDDGITSVKRLSQALADNTDLIEMGEEEGDADIVAEAETAIRSLSGEIKARQIET 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+EV AGAGGTES DWASM+L+MY WA+RR ++V +++ GE AGIK
Sbjct: 62 LLSGEADANDTYLEVHAGAGGTESQDWASMLLRMYTRWAERRRFKVEVLEVHDGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
AT+ + G A+G+ K E GVHRLVRISP+DS RRHTSFA+V V P D S + ++E
Sbjct: 122 SATVMIKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFASVWVYPVI-DDSIDIDVSE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD+RI+ +R+ G+GGQH NTTDSAVRI H+ TGI CQ ERSQH+NKA A +L+SR+
Sbjct: 181 SDVRIDTYRASGSGGQHINTTDSAVRITHLATGIAVACQAERSQHKNKAKAWEMLRSRLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ ++ + + T+I WG+QIR+YVL PY++VKDLRT E + P VL+GDLD
Sbjct: 241 EEELKKREAAASATEAAKTEIGWGHQIRSYVLQPYQLVKDLRTGVESTSPSDVLDGDLDD 300
Query: 436 FILSYLSASLDKDEG 450
F+ + LS ++ G
Sbjct: 301 FMEASLSQRIEGSAG 315
>gi|402772983|ref|YP_006592520.1| peptide chain release factor 2 [Methylocystis sp. SC2]
gi|401775003|emb|CCJ07869.1| Peptide chain release factor 2 [Methylocystis sp. SC2]
Length = 321
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 149/307 (48%), Positives = 208/307 (67%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L +M + + E+EL + + +++L E D E E +EAL ++ ++++ + +A
Sbjct: 2 RERTQLEEQMGALSSLERELDDALTLVELGEAEGDAATEKEGVEALKSILKQARARRTEA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
L +GE D YIEV +GAGGTES DWA M+ +MY W +R ++V +++E PGE AGIK
Sbjct: 62 LFAGEADANDTYIEVHSGAGGTESQDWARMLFRMYARWGERHKFQVEVIEETPGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
T+ V G A G+AK E GVHRLVRISPFDS RRHTSFA+V V P D V +NE
Sbjct: 122 SGTLLVKGHNAHGWAKTESGVHRLVRISPFDSNARRHTSFASVWVYPVV-DDRIEVNVNE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD RI+ +RS GAGGQH NTTDSA+RI HIPTGI CQ ERSQH+N+A+A +L++R+
Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAIRITHIPTGIVVACQAERSQHKNRATAWNMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+LE+ ++ + S T+I WG+QIR+YVL PY++VKDLR+ + P VL+G+LD
Sbjct: 241 ELELEKREAEANKVAASKTEIGWGHQIRSYVLQPYQLVKDLRSGFTSGTPSDVLDGELDD 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMQASLA 307
>gi|319638812|ref|ZP_07993570.1| peptide chain release factor 2 [Neisseria mucosa C102]
gi|317399716|gb|EFV80379.1| peptide chain release factor 2 [Neisseria mucosa C102]
Length = 367
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 149/320 (46%), Positives = 215/320 (67%), Gaps = 2/320 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
P LW+DP A I +E L G + + + ++ +I++A EEND E E +
Sbjct: 46 PELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLIEMAVEENDEEGFAAVQEDV 105
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
+ ++ + E + + DP +C+I++ AGAGGTE+ DWA M+ +MY +A+R+G+++
Sbjct: 106 AGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDWAGMLFRMYSRYAERKGFKI 165
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
+++E GEIAGI RATI+V+GEYA+G + E GVHRLVR SPFDS +RHTSF++V V
Sbjct: 166 EILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRYSPFDSNNKRHTSFSSVFVY 225
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D S ++IN +DLRI+ +R+ GAGGQH N TDSAVRI H PTGI CQN+RSQH
Sbjct: 226 PEI-DDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGIVVQCQNDRSQHA 284
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
NKA+AM +L+S++ +LE+ ++ + +D+ WG+QIR+YVL R +KDLRT YE
Sbjct: 285 NKAAAMEMLKSKLYELEMRKRNEEKQALEDGKSDVGWGSQIRSYVLDSSR-IKDLRTGYE 343
Query: 422 VSDPDSVLEGDLDGFILSYL 441
V + +VL+GDLDGFI + L
Sbjct: 344 VGNTKAVLDGDLDGFIEASL 363
>gi|418066617|ref|ZP_12703977.1| peptide chain release factor 2 [Geobacter metallireducens RCH3]
gi|373560110|gb|EHP86382.1| peptide chain release factor 2 [Geobacter metallireducens RCH3]
Length = 338
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 159/332 (47%), Positives = 213/332 (64%), Gaps = 11/332 (3%)
Query: 115 LSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHID----MIKLAREEND 170
+ A + P WDD A ++ RE +++++ L D +I+L E D
Sbjct: 1 MEAHIAAPGFWDDNEKAQQLLRERT----RIEKILELWDRLTRQADDIRVLIELGEEAGD 56
Query: 171 TELELESLEALLTMRRKSKE-KELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
E L+ + AL K E E +LSG D +CY + AGAGGTE+ DWA M+L+M
Sbjct: 57 -EGTLDEVRALNDQLEKDVEGAEFQRMLSGTHDKNACYFSINAGAGGTEAQDWAEMLLRM 115
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y + +R+G++ + D G+ AG+K AT VDGEYA+GY KAE G+HRLVRISPFDS
Sbjct: 116 YLRYCERKGWKTEITDYQGGDEAGVKSATFTVDGEYAYGYLKAEAGIHRLVRISPFDSNA 175
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RRHTSFA+V P D V INE+DLRI+ +RS GAGGQH NTTDSAVRI HIPTG+
Sbjct: 176 RRHTSFASVFAFPEIEDD-IEVTINEADLRIDTYRSSGAGGQHVNTTDSAVRITHIPTGL 234
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHP 409
A Q ERSQH NKA+AM +L++++ + E+ + AE +I WG+QIR+YVLHP
Sbjct: 235 VAASQCERSQHMNKATAMKMLRAKLYEKELQEREAKAAEIGGEKKEIGWGSQIRSYVLHP 294
Query: 410 YRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
Y+MVKDLRT E +PD+VL+GDL+ FI+++L
Sbjct: 295 YKMVKDLRTGVETGNPDAVLDGDLEEFIVAFL 326
>gi|335044433|ref|ZP_08537458.1| protein chain release factor B [Methylophaga aminisulfidivorans MP]
gi|333787679|gb|EGL53563.1| protein chain release factor B [Methylophaga aminisulfidivorans MP]
Length = 348
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 153/336 (45%), Positives = 223/336 (66%), Gaps = 4/336 (1%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++ EL P++W++P A ++ +E SL + + L + ++++LA E+ND
Sbjct: 16 RLIEVTRELESPSVWENPETAQKLGQERASLEKIVTTLSGHRDMLDDAKELLELAVEDND 75
Query: 171 TELELESLEALLTMRRKSKEK-ELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
+ ++++A L K EK E + SG+LD + Y+++Q+G+GGTE+ DWA+M+L+M
Sbjct: 76 -QATFDAIQADLNELEKGLEKLEFQRMFSGKLDKNNAYLDIQSGSGGTEAQDWANMILRM 134
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y W + + Y+V LM+ GE+AGIK AT++ +GEYAFG + E GVHRLVR SPFDSG
Sbjct: 135 YLRWGESQDYKVELMEVSAGEVAGIKSATVRFEGEYAFGMLRTETGVHRLVRKSPFDSGA 194
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RRHTSFA+V V P D + + IN +DLR + +RS GAGGQH NTTDSAVRI H+PT
Sbjct: 195 RRHTSFASVFVYPEV-DDTIEIDINPADLRTDTYRSSGAGGQHVNTTDSAVRITHVPTNT 253
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHP 409
CQ ERSQHQN+ AM L++++ +LE+ +Q ++ +S +DI WG+QIR+YVL
Sbjct: 254 VVQCQTERSQHQNRDRAMNQLRAKLYELELMKQNEVKQAAEESKSDIGWGSQIRSYVLDQ 313
Query: 410 YRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E + +VL+GDLD FI + L + L
Sbjct: 314 SR-IKDLRTGVETGNTQAVLDGDLDQFIEASLKSGL 348
>gi|385340970|ref|YP_005894842.1| peptide chain release factor 2 [Neisseria meningitidis G2136]
gi|385342908|ref|YP_005896779.1| peptide chain release factor 2 [Neisseria meningitidis M01-240149]
gi|416165527|ref|ZP_11607456.1| peptide chain release factor 2 [Neisseria meningitidis N1568]
gi|416193760|ref|ZP_11617316.1| peptide chain release factor 2 [Neisseria meningitidis ES14902]
gi|416209636|ref|ZP_11621272.1| peptide chain release factor 2 [Neisseria meningitidis 961-5945]
gi|325127235|gb|EGC50173.1| peptide chain release factor 2 [Neisseria meningitidis N1568]
gi|325137398|gb|EGC59986.1| peptide chain release factor 2 [Neisseria meningitidis ES14902]
gi|325141306|gb|EGC63796.1| peptide chain release factor 2 [Neisseria meningitidis 961-5945]
gi|325199214|gb|ADY94670.1| peptide chain release factor 2 [Neisseria meningitidis G2136]
gi|325203114|gb|ADY98568.1| peptide chain release factor 2 [Neisseria meningitidis M01-240149]
Length = 341
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 149/320 (46%), Positives = 215/320 (67%), Gaps = 2/320 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
P LW+DP A I +E L G + + + ++ +I++ EEND E E +
Sbjct: 20 PELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLIEMTVEENDEEGFAAVQEDV 79
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
+ ++ + E + + DP +C+I++ AGAGGTE+ DWA M+ +MY +A+R+G+++
Sbjct: 80 AGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDWAGMLFRMYSRYAERKGFKI 139
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
+++E GEIAGI RATI+V+GEYA+G + E GVHRLVR SPFDS +RHTSFA+V V
Sbjct: 140 EILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRYSPFDSNNKRHTSFASVFVY 199
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D S ++IN +DLRI+ +R+ GAGGQH N TDSAVRI H PTGI CQN+RSQH
Sbjct: 200 PEI-DDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGIVVQCQNDRSQHA 258
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
NKA+AM +L+S++ +LE+ ++ + + +D+ WG+QIR+YVL R +KDLRT YE
Sbjct: 259 NKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIRSYVLDSSR-IKDLRTGYE 317
Query: 422 VSDPDSVLEGDLDGFILSYL 441
V + +VL+GDLDGFI + L
Sbjct: 318 VGNTKAVLDGDLDGFIEASL 337
>gi|161871001|ref|YP_001600181.1| peptide chain release factor 2 [Neisseria meningitidis 053442]
gi|161596554|gb|ABX74214.1| peptide chain release factor 2 [Neisseria meningitidis 053442]
Length = 352
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 152/343 (44%), Positives = 223/343 (65%), Gaps = 2/343 (0%)
Query: 99 IKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEH 158
I+ + ++ RL + P LW+DP A I +E L G + + + ++
Sbjct: 8 IRVYMDYQGKKDRLEEVIGLSEDPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDN 67
Query: 159 IDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTE 218
+I++ EEND E E + + ++ + E + + DP +C+I++ AGAGGTE
Sbjct: 68 RMLIEMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTE 127
Query: 219 SMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHR 278
+ DWA M+ +MY +A+R+G+++ +++E GEIAGI RATI+V+GEYA+G + E GVHR
Sbjct: 128 AEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHR 187
Query: 279 LVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDS 338
LVR SPFDS +RHTSFA+V V P D S ++IN +DLRI+ +R+ GAGGQH N TDS
Sbjct: 188 LVRYSPFDSNNKRHTSFASVFVYPEI-DDSIEIEINPADLRIDTYRASGAGGQHINKTDS 246
Query: 339 AVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISW 398
AVRI H PTGI CQN+RSQH NKA+AM +L+S++ +LE+ ++ + + +D+ W
Sbjct: 247 AVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGW 306
Query: 399 GNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
G+QIR+YVL R +KDLRT YEV + +VL+GDLDGFI + L
Sbjct: 307 GSQIRSYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 348
>gi|430760730|ref|YP_007216587.1| Peptide chain release factor 2; programmed frameshift-containing
[Thioalkalivibrio nitratireducens DSM 14787]
gi|430010354|gb|AGA33106.1| Peptide chain release factor 2; programmed frameshift-containing
[Thioalkalivibrio nitratireducens DSM 14787]
Length = 328
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 144/328 (43%), Positives = 220/328 (67%), Gaps = 2/328 (0%)
Query: 118 ELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELES 177
EL P +W+DP A + RE L + ++ E +L + D+++LA ++D
Sbjct: 3 ELEDPEVWNDPERAQALGRERAQLEAIVLNIREIEAQLDDSRDLLELAEADDDPSTVDAV 62
Query: 178 LEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRR 237
L + R+ ++ E + SGE+D + ++++QAG+GGTE+ DWA M+L+MY WA+RR
Sbjct: 63 ATDLDQLNRRVEDLEFRRMFSGEMDSANAFLDIQAGSGGTEAQDWAEMLLRMYLRWAERR 122
Query: 238 GYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAA 297
G++ +++ G++AGIK AT+K DGEYAFG+ + E+GVHRLVR SP+DSG RRHTSFAA
Sbjct: 123 GFKTEIIELSEGDVAGIKSATVKFDGEYAFGWLRTEIGVHRLVRKSPYDSGNRRHTSFAA 182
Query: 298 VAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNER 357
V V P D S ++IN +DL+++ +R+ GAGGQH N T+SA+RI H+P+G+ CQN+R
Sbjct: 183 VFVSPEV-DDSFEIEINPADLKVDTYRASGAGGQHVNRTESAIRITHMPSGVVVACQNDR 241
Query: 358 SQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLR 417
SQH+N+ +AM L++++ ++EI ++ + +DI WG+QIR+YVL R +KDLR
Sbjct: 242 SQHKNRDTAMKQLKAKLYEIEIQKRNAEKQALEDTKSDIGWGSQIRSYVLDQSR-IKDLR 300
Query: 418 TNYEVSDPDSVLEGDLDGFILSYLSASL 445
T EV + +VL+GDLD FI + L + L
Sbjct: 301 TGVEVGNTQAVLDGDLDPFIEASLKSGL 328
>gi|385208965|ref|ZP_10035833.1| peptide chain release factor 2 [Burkholderia sp. Ch1-1]
gi|385181303|gb|EIF30579.1| peptide chain release factor 2 [Burkholderia sp. Ch1-1]
Length = 367
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 152/347 (43%), Positives = 228/347 (65%), Gaps = 6/347 (1%)
Query: 99 IKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEH 158
++ L + + +RL ++ EL P++W+D HA + RE L + ++ + + +L +
Sbjct: 23 LRGYLDYDDKALRLIEVNRELEDPDVWNDSKHAQALGREKKLLDDTVGKLTSLDNDLRDA 82
Query: 159 IDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTE 218
D+ +AREE D L + ++ + E + S DP + ++++QAGAGGTE
Sbjct: 83 QDLFDMAREEGDEATLLACESDAQGIEQRVADMEFRRMFSNPADPNNAFLDIQAGAGGTE 142
Query: 219 SMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHR 278
+ DWA+M+L+ Y + +R+G++ ++++ G++AGIK ATIK++GEYA+G+ + E GVHR
Sbjct: 143 ACDWAAMLLRQYLRYCERKGFKTEVLEQTDGDVAGIKNATIKIEGEYAYGFLRTETGVHR 202
Query: 279 LVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDS 338
LVR SPFDS RHTSF++V V P D S V IN +DLRI+ +R+ GAGGQH N TDS
Sbjct: 203 LVRKSPFDSSGGRHTSFSSVFVYPEI-DDSIEVDINPADLRIDTYRASGAGGQHINKTDS 261
Query: 339 AVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISW 398
AVRI H+P+GI CQN+RSQH+N+A AM +L+SR+ + EI ++ + + TD+ W
Sbjct: 262 AVRITHMPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQEEQDKLEAGKTDVGW 321
Query: 399 GNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
G+QIR+YVL R +KDLRTN E+S+ SVL+GDLD FI SASL
Sbjct: 322 GHQIRSYVLDNSR-IKDLRTNVEISNTKSVLDGDLDPFI----SASL 363
>gi|340781058|ref|YP_004747665.1| peptide chain release factor 2 [Acidithiobacillus caldus SM-1]
gi|340555211|gb|AEK56965.1| peptide chain release factor 2 [Acidithiobacillus caldus SM-1]
Length = 349
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 155/336 (46%), Positives = 220/336 (65%), Gaps = 4/336 (1%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL + E P LW+DP A + RE L ++ ++ +Q+L + +M++LA E D
Sbjct: 17 RLEEVQLESEDPRLWEDPERAQALGRERTQLEAVVRPLQELDQKLRDSAEMVELAVAEQD 76
Query: 171 TELELESLEALLTMRRKSKEK-ELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
L LE++ L R + EK E + SG D ++++QAGAGGTE+ DWA+M+L+M
Sbjct: 77 EAL-LEAVAGDLEAARATVEKLEFQRMFSGPQDGADAFVDIQAGAGGTEAQDWANMLLRM 135
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y W + RG+ L++ GE+AGIK A++ V G++AFG+ + E GVHRLVR SPFDSG
Sbjct: 136 YLHWCEARGFSTELVEVSEGEVAGIKSASLHVRGDHAFGWLRTETGVHRLVRKSPFDSGN 195
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RRHTSFA+V V P D S ++IN +DL+++ +R+ GAGGQH N TDSAVR+ HIPTGI
Sbjct: 196 RRHTSFASVFVYPEI-DDSFEIEINPADLKVDTYRASGAGGQHVNKTDSAVRLTHIPTGI 254
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHP 409
CQ +RSQH+N+A AM +L+S++ +LE+ ++ + +DI WG+QIR+YVL
Sbjct: 255 VVACQTDRSQHKNRAEAMRMLRSKLYELEMQKRNAEKQALEDTKSDIGWGHQIRSYVLDQ 314
Query: 410 YRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT EV D VL+GDLDGF+ + L A L
Sbjct: 315 SR-IKDLRTGVEVGDTQRVLDGDLDGFVEAALKAGL 349
>gi|416250223|ref|ZP_11637232.1| peptide chain release factor 2 [Moraxella catarrhalis CO72]
gi|326575346|gb|EGE25274.1| peptide chain release factor 2 [Moraxella catarrhalis CO72]
Length = 349
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 157/336 (46%), Positives = 223/336 (66%), Gaps = 4/336 (1%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++ EL P++W++P A +IS+E L G + + +L + M++LA E++D
Sbjct: 17 RLEEVNLELENPDIWNNPDLATKISKEKSVLDGIVGVIDGLSAKLDDAAAMLELAVEDDD 76
Query: 171 TELELESLEALLTMRRKSKEK-ELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
L L ++A L S E+ E + SGE+D +CY+++Q+G+GGTE+ DWA M+L+M
Sbjct: 77 ESL-LSDVQAELDDALNSVEELEFRRMFSGEMDANNCYLDIQSGSGGTEAQDWAQMLLRM 135
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y W + G++ +++ G +AGIK ATI V G+YAFG+ + E+GVHRLVR SPFDS
Sbjct: 136 YLRWCESHGFKAEVLEVSEGGVAGIKSATIMVKGDYAFGWLRTEIGVHRLVRKSPFDSNN 195
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RHTSFAAV V P D + + IN +DLRI+ +RS GAGGQH NTTDSAVRI H PTG+
Sbjct: 196 GRHTSFAAVFVSPEI-DDNIGIDINPADLRIDTYRSSGAGGQHVNTTDSAVRITHQPTGV 254
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHP 409
CQNERSQH NK +AM +L++++ +LE+ ++ + +S +DI WG+QIR+YVL
Sbjct: 255 VVACQNERSQHANKDTAMKMLRAKLYELEMQKRMEKQQALEESKSDIGWGSQIRSYVLDD 314
Query: 410 YRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E S+ +VL GDLD FI + L A L
Sbjct: 315 SR-IKDLRTGVETSNTTAVLNGDLDKFIEASLKAGL 349
>gi|354558919|ref|ZP_08978172.1| Peptide chain release factor 2 [Desulfitobacterium metallireducens
DSM 15288]
gi|353545243|gb|EHC14695.1| Peptide chain release factor 2 [Desulfitobacterium metallireducens
DSM 15288]
Length = 332
Score = 304 bits (779), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 150/327 (45%), Positives = 217/327 (66%)
Query: 118 ELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELES 177
+L +P+ WDDP A ++ +E G K+K + + + + +LA EE D LE E
Sbjct: 2 DLTRPDFWDDPDSAQKVMQELGFQQAKVKMYEDLHAKFEDLTVLYELATEEEDNSLETEV 61
Query: 178 LEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRR 237
+ ++ ++ EL+ LLS D + + + AGAGGTE+ DW SM+ +MY W +RR
Sbjct: 62 ETEVKELQGIFEKLELEILLSNPYDQNNTILTLHAGAGGTEAQDWVSMLYRMYVRWGERR 121
Query: 238 GYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAA 297
GY+V MD +PG+ AGIK ATI + GE A+GYAK+E GVHRLVRISPFD+ RRHTSFA+
Sbjct: 122 GYKVETMDLLPGDEAGIKSATISIAGENAYGYAKSEKGVHRLVRISPFDAAGRRHTSFAS 181
Query: 298 VAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNER 357
V VIP + + + IN +L+++ +R+ GAGGQH N T SAVRI H+PTGI CQ+ER
Sbjct: 182 VDVIPEVEEDDSEIMINPDELKVDTYRASGAGGQHINKTSSAVRITHLPTGIVVACQSER 241
Query: 358 SQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLR 417
SQ QN+A M VL++++ +L+ +QA +E +I+WG+QIR+YV HPY MVKD R
Sbjct: 242 SQIQNRAYVMRVLKAKLLELKRQQQADEISEIRGEQQEIAWGSQIRSYVFHPYNMVKDHR 301
Query: 418 TNYEVSDPDSVLEGDLDGFILSYLSAS 444
TN E ++ +V++G++D FI +YL ++
Sbjct: 302 TNVETANVAAVMDGEIDEFIAAYLQST 328
>gi|15604144|ref|NP_220659.1| peptide chain release factor 2 [Rickettsia prowazekii str. Madrid
E]
gi|6225944|sp|Q9ZDQ2.1|RF2_RICPR RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|3860836|emb|CAA14736.1| PEPTIDE CHAIN RELEASE FACTOR 2 (prfB) [Rickettsia prowazekii str.
Madrid E]
Length = 369
Score = 304 bits (779), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 157/368 (42%), Positives = 234/368 (63%), Gaps = 5/368 (1%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
+++ I QS+ +I + L + L VRL L PNLW++ +A + RE +L K+
Sbjct: 6 ENYIKKIEQSLDLIWRSLDIEALTVRLTELEELTADPNLWNNNANAQTLLREKNNLEEKL 65
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
+ L E +++ +A END E + + + + + E + L SGE D +
Sbjct: 66 NVFNKLKSNLKEILELEAMAEVENDLETLNQIEQDFKKLSIITAKFETECLFSGETDCNN 125
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
C++E+ AGAGGTES DWAS++++MY +A+R G++ +++ + GE GIK TI++ G+
Sbjct: 126 CFLEINAGAGGTESHDWASIMMRMYLRFAERLGFKTKIINMINGEEVGIKSCTIRIIGKR 185
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
A+G+ K E GVHRLVRISPF++ +R TSFA+ + P D + I + DLRI+ FRS
Sbjct: 186 AYGWFKTESGVHRLVRISPFNAAGKRMTSFASSWIYP-EIDDDIAITIEDKDLRIDTFRS 244
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQM 385
GAGGQH NTTDSAVRI HIPT CQ++RSQH+NKA AM +LQ+++ +LE+ ++ +
Sbjct: 245 SGAGGQHVNTTDSAVRITHIPTNTVTQCQSDRSQHKNKAQAMKMLQAKLYKLEMQKRNEN 304
Query: 386 NAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ + TD SWG+QIR+YVL PY++VKDLRTNYE SD VL+G+L+ F+ SASL
Sbjct: 305 VDKQNANKTDNSWGHQIRSYVLQPYQIVKDLRTNYETSDTKGVLDGNLEDFV----SASL 360
Query: 446 DKDEGGQQ 453
+ G +
Sbjct: 361 SMNNSGNK 368
>gi|409406593|ref|ZP_11255055.1| peptide chain release factor 2 [Herbaspirillum sp. GW103]
gi|386435142|gb|EIJ47967.1| peptide chain release factor 2 [Herbaspirillum sp. GW103]
Length = 349
Score = 304 bits (779), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 145/331 (43%), Positives = 223/331 (67%), Gaps = 2/331 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
+L ++AEL PN+W+D A + +E SL + + + EL + D+ ++AREE D
Sbjct: 17 KLEQVNAELEDPNVWNDQKRAQDLGKEKKSLEAIVHTLVKIDSELTDARDLFEMAREEKD 76
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
+ + +++ +E E + SG +D +C+I++QAGAGGTE+ DWASM+L+ Y
Sbjct: 77 EDTIIAIEADAENLKKLVEEMEFRRMFSGPMDANNCFIDIQAGAGGTEAQDWASMLLRQY 136
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
+ +R+G++ ++++ GE+AGIK ATIKV+GEYA+G+ + E GVHRLVR SPFDS
Sbjct: 137 LRYCERKGFKAEILEQSDGEVAGIKTATIKVEGEYAYGFLRTETGVHRLVRKSPFDSSNG 196
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSF+++ V P D S ++IN +D+R++ +R+ GAGGQH N TDSAVR+ H P+GI
Sbjct: 197 RHTSFSSLFVYPEV-DESFEIEINPADVRVDTYRASGAGGQHINKTDSAVRLTHAPSGIV 255
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+N+A A +L++++ +LE+ ++ + S TD+ WG+QIR+YVL
Sbjct: 256 VQCQNDRSQHRNRAEAWDMLRAKLFELELRKRMSEQQKLEDSKTDVGWGHQIRSYVLDQS 315
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
R +KDLRTN+E + +VL+GDLD FI + L
Sbjct: 316 R-IKDLRTNFETGNTKAVLDGDLDDFIAASL 345
>gi|344344357|ref|ZP_08775220.1| peptide chain release factor 2 [Marichromatium purpuratum 984]
gi|343804027|gb|EGV21930.1| peptide chain release factor 2 [Marichromatium purpuratum 984]
Length = 365
Score = 304 bits (779), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 164/363 (45%), Positives = 231/363 (63%), Gaps = 13/363 (3%)
Query: 92 IAQSIQVIKKRLQ-------WKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGK 144
IA I +K RLQ + RL + EL P++W++P A + RE +L
Sbjct: 7 IASQINDLKGRLQSLRGYLDYDGRQERLTEVLRELEDPDVWNEPDRAQALGRERATLEAV 66
Query: 145 MKEVKAFEQELLEHIDMIKLAREENDTELELESLEA-LLTMRRKSKEKELDALLSGELDP 203
+ + L + D++ +A EE D + + +LE L + E E + SGE+D
Sbjct: 67 VVTIDELTSGLADADDLLAMAVEEEDADT-VAALETDLAGYEARVAELEFRRMFSGEMDA 125
Query: 204 CSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDG 263
+ ++++QAG+GGTE+ DW+ M+L+MY W +RRG++ LM+ GE+AGIK ATIK +G
Sbjct: 126 NNAFVDIQAGSGGTEAQDWSEMLLRMYLRWGERRGFKTELMEASAGEVAGIKSATIKFEG 185
Query: 264 EYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERF 323
EYAFG+ + E GVHRLVR SPFDSG RRHTSFA+V V P D + ++IN +DLRI+ +
Sbjct: 186 EYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFASVFVSPEI-DDTVDIEINPADLRIDVY 244
Query: 324 RSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI-ARQ 382
R+ GAGGQH N T+SAVRI H PTGI CQN+RSQH+NK AM L++++ +LE+ RQ
Sbjct: 245 RASGAGGQHVNRTESAVRITHNPTGIVTQCQNDRSQHKNKDQAMKQLRAKLYELEMQKRQ 304
Query: 383 AQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
A A +S +DI WG+QIR+YVL R +KDLRT E+ + SVL+G+LD FI + L
Sbjct: 305 ADQQALE-ESKSDIGWGSQIRSYVLDQSR-IKDLRTGVEIGNTQSVLDGNLDPFIEASLK 362
Query: 443 ASL 445
+ L
Sbjct: 363 SGL 365
>gi|323526607|ref|YP_004228760.1| peptide chain release factor 2 [Burkholderia sp. CCGE1001]
gi|323383609|gb|ADX55700.1| Peptide chain release factor 2 [Burkholderia sp. CCGE1001]
Length = 367
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 157/374 (41%), Positives = 238/374 (63%), Gaps = 13/374 (3%)
Query: 72 ASQWTILDESEGDWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHA 131
A + ++ S D ++ AA + + L + + + RL ++ EL P++W+D HA
Sbjct: 3 AERLNAIEASLADLRTRAADL-------RGYLDYDDKSRRLIEVNRELEDPDVWNDSKHA 55
Query: 132 GRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEK 191
+ RE L + ++ + +L + D+ ++AREE D E + + ++ +
Sbjct: 56 QALGREKKLLDDTVGKLTSLHNDLRDAQDLFEMAREEGDDETLVACEADAQALEQRVADM 115
Query: 192 ELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEI 251
E + + DP + ++++QAGAGGTE+ DWASM+L+ Y + +R+G++ ++++ G++
Sbjct: 116 EFRRMFANPADPNNAFLDIQAGAGGTEACDWASMLLRQYLRYCERKGFKTEVLEQTDGDV 175
Query: 252 AGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHV 311
AGIK ATIK++GEYA+G+ + E GVHRLVR SPFDS RHTSF++V V P D S V
Sbjct: 176 AGIKNATIKIEGEYAYGFLRTETGVHRLVRKSPFDSSGGRHTSFSSVFVYPEI-DDSIEV 234
Query: 312 QINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQ 371
IN +DLRI+ +R+ GAGGQH N TDSAVRI H+P+GI CQN+RSQH+N+A AM +L+
Sbjct: 235 DINPADLRIDTYRASGAGGQHINKTDSAVRITHMPSGIVVQCQNDRSQHRNRAEAMAMLK 294
Query: 372 SRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEG 431
SR+ + EI ++ + TD+ WG+QIR+YVL R +KDLRTN E+S+ SVL+G
Sbjct: 295 SRLYEAEIRKRQAEQDKLEAGKTDVGWGHQIRSYVLDNSR-IKDLRTNVEISNTKSVLDG 353
Query: 432 DLDGFILSYLSASL 445
DLD FI SASL
Sbjct: 354 DLDPFI----SASL 363
>gi|253687049|ref|YP_003016239.1| hypothetical protein PC1_0648 [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|259585229|sp|C6D8Z5.1|RF2_PECCP RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|251753627|gb|ACT11703.1| hypothetical protein PC1_0648 [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 365
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 155/366 (42%), Positives = 233/366 (63%), Gaps = 14/366 (3%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
K+ +++ V++ L + RL ++AEL +P++W++P A + +E SL +
Sbjct: 8 KNRIQDLSERSAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIV 67
Query: 146 KEVKAFEQELLEHIDMIKLAREE------NDTELELESLEALLTMRRKSKEKELDALLSG 199
+ Q L + +++LA EE NDT +EL++LE K + E + SG
Sbjct: 68 DTIDQLTQGLEDVAGLLELAVEEDDEDTFNDTTVELDALE------NKLGQLEFRRMFSG 121
Query: 200 ELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATI 259
+ D CY+++QAG+GGTE+ DWASM+++MY WA+ +G++ +++E G++AG K ATI
Sbjct: 122 QYDSADCYLDIQAGSGGTEAQDWASMLVRMYLRWAEAKGFKTEIIEESDGDVAGTKSATI 181
Query: 260 KVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLR 319
K+ G+YAFG+ + E GVHRLVR SPFDSG RRHTSF++ V P D ++IN +DLR
Sbjct: 182 KIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVED-DIDIEINPADLR 240
Query: 320 IERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI 379
I+ +R+ GAGGQH N T+SAVRI H+PTGI CQN+RSQH+NK AM L++++ + E+
Sbjct: 241 IDVYRASGAGGQHVNRTESAVRITHMPTGIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEM 300
Query: 380 ARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILS 439
++ + +DI WG+QIR+YVL R +KDLRT E + +VL+GDLD FI +
Sbjct: 301 QKKNAEKQAMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEA 359
Query: 440 YLSASL 445
L A L
Sbjct: 360 SLKAGL 365
>gi|383787632|ref|YP_005472201.1| peptide chain release factor 2 [Fervidobacterium pennivorans DSM
9078]
gi|383110479|gb|AFG36082.1| peptide chain release factor 2 [Fervidobacterium pennivorans DSM
9078]
Length = 369
Score = 304 bits (778), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 157/333 (47%), Positives = 222/333 (66%), Gaps = 11/333 (3%)
Query: 109 NVRLNLLSAELNKPNLWDDPVHAGRISRE---HGSLMGKMKEVKAFEQELLEHIDM-IKL 164
+L L E KP+ W+D A +++RE ++ M+ +K L E I++ I+L
Sbjct: 30 KTKLKELEEESLKPDFWNDQKRAQQVNREIQRTRKIIEDMERIKV----LFEDIEVGIEL 85
Query: 165 AREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWAS 224
+ E+ + LE E + + +K +E EL+ +L+G+ D + Y+ + GAGGTES DWAS
Sbjct: 86 SEEDPSMQEHLE--EMIEEVAKKIREFELEMILNGKFDASNAYLSIHPGAGGTESQDWAS 143
Query: 225 MVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISP 284
M+L+MY WA+R+GY V ++D GE AGIK ATI + G++A+GY K E GVHRLVRISP
Sbjct: 144 MLLRMYMRWAERKGYDVEIVDYQEGEEAGIKSATIYIKGDFAYGYLKYERGVHRLVRISP 203
Query: 285 FDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIH 344
FD+ KRRHTSFA+V V+P D E DLRI+ +R+ GAGGQ+ N T+SAVRI H
Sbjct: 204 FDANKRRHTSFASVNVLPEIEDDIDIEIKPE-DLRIDTYRASGAGGQYVNKTESAVRITH 262
Query: 345 IPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRT 404
+PTGI TCQ ERSQ QN+ +AM +L++R+ QLE+ ++ + + L DISWGNQIR+
Sbjct: 263 LPTGIVVTCQTERSQLQNRETAMKMLKARLYQLELEKRRKQIEQIQGELKDISWGNQIRS 322
Query: 405 YVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
YV HPY MVKD RT+ E + ++V++GD+D FI
Sbjct: 323 YVFHPYTMVKDHRTDVETGNIEAVMDGDIDMFI 355
>gi|415912112|ref|ZP_11553493.1| Peptide chain release factor 2 [Herbaspirillum frisingense GSF30]
gi|407762148|gb|EKF71054.1| Peptide chain release factor 2 [Herbaspirillum frisingense GSF30]
Length = 337
Score = 304 bits (778), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 147/332 (44%), Positives = 227/332 (68%), Gaps = 4/332 (1%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
+L ++AEL PN+W+D A + +E SL + + + EL + D+ ++AREE D
Sbjct: 5 KLEQVNAELEDPNVWNDQKRAQDLGKEKKSLEAIVHTLIKIDSELTDARDLFEMAREEKD 64
Query: 171 TELELESLEA-LLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
E + ++EA +++ +E E + SG +D +C+I++QAGAGGTE+ DWASM+L+
Sbjct: 65 -EDTIVAIEADAENLKKLVEEMEFRRMFSGPMDANNCFIDIQAGAGGTEAQDWASMLLRQ 123
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y + +R+G++ +M++ GE+AGIK ATIKV+G+YA+G+ + E GVHRLVR SPFDS
Sbjct: 124 YLRYCERKGFKAEIMEQSDGEVAGIKTATIKVEGDYAYGFLRTETGVHRLVRKSPFDSSN 183
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RHTSF+++ V P D S ++IN +D+R++ +R+ GAGGQH N TDSAVR+ H P+GI
Sbjct: 184 GRHTSFSSLFVYPEV-DDSFEIEINPADVRVDTYRASGAGGQHINKTDSAVRLTHAPSGI 242
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHP 409
CQN+RSQH+N+A A +L++++ +LE+ ++ + S TD+ WG+QIR+YVL
Sbjct: 243 VVQCQNDRSQHRNRAEAWDMLRAKLFELELRKRMSEQQKLEDSKTDVGWGHQIRSYVLDQ 302
Query: 410 YRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
R +KDLRTN+E + +VL+GD+D FI + L
Sbjct: 303 SR-IKDLRTNFETGNTKAVLDGDIDDFIAASL 333
>gi|392400126|ref|YP_006436726.1| peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis Cp162]
gi|390531204|gb|AFM06933.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis Cp162]
Length = 366
Score = 304 bits (778), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 162/347 (46%), Positives = 229/347 (65%), Gaps = 12/347 (3%)
Query: 95 SIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQE 154
++ I+K + + L R+ L + + P LWD+P HA +++ E S+ ++K++ + Q
Sbjct: 15 TLTTIEKVMDPEELASRVRELEQQASDPTLWDNPDHAQKVTTELSSVQAQLKKLTSLRQR 74
Query: 155 LLEHIDMIKLAREEND-TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAG 213
+ + M +LA EE D TEL E L L + + + E+ A+LSGE D I +++G
Sbjct: 75 IDDMPVMYELAEEEGDGTELADEELAELTS---EIESLEVKAMLSGEYDAREAVINIRSG 131
Query: 214 AGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAE 273
AGG ++ DWA M+++MY WA++ +V + D E AGIK AT V GEY +G E
Sbjct: 132 AGGVDAADWAEMLMRMYVRWAEKNDRKVDIYDISYAEEAGIKSATFVVHGEYMYGQLSVE 191
Query: 274 VGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHA 333
G HRLVRISPFD+ RR TSFA + V+P + + H+ I +S++R++ +RS G GGQ
Sbjct: 192 QGAHRLVRISPFDNQGRRQTSFAEIEVLPVV-EQTDHIDIPDSEVRVDVYRSSGPGGQSV 250
Query: 334 NTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ---AQMNAEHT 390
NTTDSAVR+ HIPTGI TCQNE+SQ QNKASAM VLQ+++ LE RQ A+++A
Sbjct: 251 NTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKL--LEKKRQEERAELDA--L 306
Query: 391 QSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
+ + SWGNQ+R+YVLHPY+MVKDLRTNYEV+DP VL+GDLDGF+
Sbjct: 307 GAGGNASWGNQMRSYVLHPYQMVKDLRTNYEVNDPQKVLDGDLDGFL 353
>gi|58584553|ref|YP_198126.1| protein chain release factor B [Wolbachia endosymbiont strain TRS
of Brugia malayi]
gi|58418869|gb|AAW70884.1| Protein chain release factor B [Wolbachia endosymbiont strain TRS
of Brugia malayi]
Length = 336
Score = 304 bits (778), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 144/334 (43%), Positives = 218/334 (65%), Gaps = 2/334 (0%)
Query: 110 VRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEN 169
+RL L ++ NLW D A + +E+ + ++ E + + I ++K A +EN
Sbjct: 1 MRLEKLESQTADGNLWQDNQKAQEVLKEYSKIKNDVESFSKLESDYNDAISLMKSAIDEN 60
Query: 170 DTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
D E E L+ + + K KE D L + E D C++E+ +GAGGTES DWA M+++M
Sbjct: 61 DEEFFSEVENELVKLEKLIKRKETDFLFTDEADNNDCFLEIHSGAGGTESNDWAEMLMRM 120
Query: 230 YKSWAQ-RRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSG 288
Y WA+ ++V +++++ G+ GIK A IK+ GE A+G+AK+E G+HRLVRISPFD+
Sbjct: 121 YIRWAEIYHNFKVEVVEKLEGDSIGIKSAIIKIIGEKAYGWAKSESGIHRLVRISPFDAN 180
Query: 289 KRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTG 348
+RHTSF ++ V P DS + ++E L+I+ +R+ GAGGQH N T+SAVR+ HIPTG
Sbjct: 181 SKRHTSFVSIGVTPVIEDS-IDIAVDEGTLKIDTYRASGAGGQHVNKTESAVRVTHIPTG 239
Query: 349 ITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLH 408
+ CQN RSQHQNK A+ +L+ R+ Q+++ ++ Q AE I WGNQIR+YV+H
Sbjct: 240 VIVQCQNNRSQHQNKNEALKLLKGRLYQIKLEKKEQKMAEEYGKKCGIGWGNQIRSYVMH 299
Query: 409 PYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
PY+MVKDLRT YEV + +S+ +G++D FI++ L+
Sbjct: 300 PYQMVKDLRTGYEVGNINSIFDGNIDCFIVNVLT 333
>gi|206578228|ref|YP_002236652.1| peptide chain release factor 2 [Klebsiella pneumoniae 342]
gi|288933629|ref|YP_003437688.1| hypothetical protein Kvar_0746 [Klebsiella variicola At-22]
gi|238054482|sp|B5XUF3.1|RF2_KLEP3 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|206567286|gb|ACI09062.1| peptide chain release factor 2 [Klebsiella pneumoniae 342]
gi|288888358|gb|ADC56676.1| hypothetical protein Kvar_0746 [Klebsiella variicola At-22]
Length = 365
Score = 304 bits (778), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 152/360 (42%), Positives = 228/360 (63%), Gaps = 2/360 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
K+ + + V++ L + RL ++AEL +P++W++P A + +E SL +
Sbjct: 8 KNRIQDLTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIV 67
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
+ Q L + +++LA E D E E++ L + K + E + SGE D
Sbjct: 68 DTLDQMSQGLEDVAGLLELAVEAEDEETFNEAVAELDGLEEKLAQLEFRRMFSGEYDSAD 127
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
CY+++QAG+GGTE+ DWASM+++MY WA+ RG++ +++E GE+AGIK TIK+ G+Y
Sbjct: 128 CYLDIQAGSGGTEAQDWASMLMRMYLRWAEARGFKTEIIEESEGEVAGIKSVTIKIIGDY 187
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
A+G+ + E GVHRLVR SPFDSG RRHTSF++ V P D ++IN +DLRI+ +R+
Sbjct: 188 AYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEV-DDDIDIEINPADLRIDVYRA 246
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQM 385
GAGGQH N T+SAVRI HIPTG+ CQN+RSQH+NK AM +++++ +LE+ ++
Sbjct: 247 SGAGGQHVNRTESAVRITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAE 306
Query: 386 NAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ +DI WG+QIR+YVL R +KDLRT E + +VL+G LD FI + L A L
Sbjct: 307 KQAMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL 365
>gi|229586524|ref|YP_002845025.1| peptide chain release factor 2 [Rickettsia africae ESF-5]
gi|259585246|sp|C3PMX2.1|RF2_RICAE RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|228021574|gb|ACP53282.1| Peptide chain release factor RF-2 [Rickettsia africae ESF-5]
Length = 368
Score = 304 bits (778), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 161/373 (43%), Positives = 243/373 (65%), Gaps = 15/373 (4%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNV-----RLNLLSAELNKPNLWDDPVHAGRISREHGS 140
+++ I QS++++ W++L+V RLN L P+LW+D +A ++ RE +
Sbjct: 6 ENYVKKIEQSLELL-----WRSLDVEASTERLNALEELTADPSLWNDQANAQKLLREKSN 60
Query: 141 LMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGE 200
L K+ + L + +++ ++A END E + + L + + + E + L SGE
Sbjct: 61 LEEKLNAFNKLKSNLKDALELEEMAEAENDLETLSQIEQDLKNLSIIAAKFETECLFSGE 120
Query: 201 LDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIK 260
D +C++E+ AGAGGTES DWAS++++MY +A+R G++ +++ + GE AGIK TI+
Sbjct: 121 ADGNNCFLEINAGAGGTESHDWASIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIR 180
Query: 261 VDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRI 320
+ G+ A+G+ K E GVHRLVRISPF++ +R TSFA+ V P D + + I + DLRI
Sbjct: 181 IIGKRAYGWFKTETGVHRLVRISPFNAAGKRMTSFASSWVYPEI-DDNIAITIEDKDLRI 239
Query: 321 ERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIA 380
+ FR+ GAGGQH NTTDSAVRI HIPTG CQ++RSQH+NKA AM +LQ+++ +LE+
Sbjct: 240 DTFRASGAGGQHVNTTDSAVRITHIPTGTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQ 299
Query: 381 RQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSY 440
++ E + TD SWG+QIR+YVL PY MVKDLRT+YE SD VL+GDL+ F+
Sbjct: 300 KRTDSVNEQNATKTDNSWGHQIRSYVLQPYHMVKDLRTDYETSDTKGVLDGDLEEFV--- 356
Query: 441 LSASLDKDEGGQQ 453
SA+L + GG++
Sbjct: 357 -SANLAMNVGGKK 368
>gi|389690940|ref|ZP_10179833.1| peptide chain release factor 2 [Microvirga sp. WSM3557]
gi|388589183|gb|EIM29472.1| peptide chain release factor 2 [Microvirga sp. WSM3557]
Length = 321
Score = 304 bits (778), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 152/307 (49%), Positives = 209/307 (68%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE SL ++ VK EQ+L + I +I+L E D E E + ++ ++ ++++
Sbjct: 2 RERTSLEDQITAVKRLEQDLEDAITLIELGEAEEDEATIREGEETIRGLQAEAARRQVET 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+EV +GAGGTES DWA+M+ +MY WA+RR Y+V L++ GE AGIK
Sbjct: 62 LLSGEADANDTYVEVHSGAGGTESQDWANMLQRMYARWAERRKYKVELLEITDGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
AT+ + G A+G+ K E GVHRLVRISP+DS RRHTSFA+V V P D +++I E
Sbjct: 122 SATLLIKGLNAYGWLKTESGVHRLVRISPYDSNARRHTSFASVWVYPVV-DDRINIEIKE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD RI+ FRS GAGGQH NTTDSAVRI HIP+GI CQ ERSQH+N+A+A +L++R+
Sbjct: 181 SDCRIDTFRSSGAGGQHVNTTDSAVRITHIPSGIVVACQQERSQHKNRATAWNMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ ++ + + TDI WG+QIR+YVL PY+MVKDLRT + + P VL+GDLD
Sbjct: 241 EAELKKREEKANAEAAAKTDIGWGHQIRSYVLQPYQMVKDLRTGAQSTSPQDVLDGDLDP 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMEASLA 307
>gi|227486869|ref|ZP_03917185.1| peptide chain release factor 2 [Corynebacterium glucuronolyticum
ATCC 51867]
gi|227541969|ref|ZP_03972018.1| peptide chain release factor 2 [Corynebacterium glucuronolyticum
ATCC 51866]
gi|227092943|gb|EEI28255.1| peptide chain release factor 2 [Corynebacterium glucuronolyticum
ATCC 51867]
gi|227182412|gb|EEI63384.1| peptide chain release factor 2 [Corynebacterium glucuronolyticum
ATCC 51866]
Length = 366
Score = 304 bits (778), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 163/358 (45%), Positives = 227/358 (63%), Gaps = 12/358 (3%)
Query: 84 DWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
D S +++ ++ I+K L L R L P LWDDP +A +++ +
Sbjct: 4 DVASDIESLSDTLTTIEKVLDLDALAERARELELTAADPTLWDDPTNAQKVTSDLSHTQS 63
Query: 144 KMKEVKAFEQELLEHIDMIKLAREEND-TELELESLEALLTMRRKSKEKELDALLSGELD 202
+K+V+A Q + + M +LA EE + TEL + + +R+ + E+ +LSGE D
Sbjct: 64 TLKKVRALRQRVDDLPVMYELAEEEGEGTEL---ADDERADLRQAIESMEVQTMLSGEYD 120
Query: 203 PCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVD 262
+ +++GAGG ++ DWA M+++MY WA++ G++V + D E AGIK AT +V
Sbjct: 121 ERDAVVTIRSGAGGVDAADWAEMLMRMYIRWAEKEGHKVQVFDTSYAEEAGIKSATFQVS 180
Query: 263 GEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIER 322
Y +G E G HRLVRISPFD+ RR TSFA V V+P + + H+ I +SD+R++
Sbjct: 181 DPYMYGTLSVEQGTHRLVRISPFDNQARRQTSFAEVEVLPVV-EKTDHIDIPDSDVRVDV 239
Query: 323 FRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIAR- 381
+RS G GGQ NTTDSAVRI HIPTGI TCQNE+SQ QN+ASAM VLQSR+ LE R
Sbjct: 240 YRSSGPGGQSVNTTDSAVRITHIPTGIVVTCQNEKSQIQNRASAMAVLQSRL--LERKRQ 297
Query: 382 --QAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
QA+M+A + + SWGNQ+R+YVLHPY+MVKDLRTNYEV DP VL+GD+DGF+
Sbjct: 298 EEQAEMDA--LGAGGEASWGNQMRSYVLHPYQMVKDLRTNYEVGDPSKVLDGDIDGFL 353
>gi|302390246|ref|YP_003826067.1| peptide chain release factor 2 (bRF-2) [Thermosediminibacter oceani
DSM 16646]
gi|302200874|gb|ADL08444.1| bacterial peptide chain release factor 2 (bRF-2)
[Thermosediminibacter oceani DSM 16646]
Length = 365
Score = 304 bits (778), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 159/358 (44%), Positives = 226/358 (63%), Gaps = 1/358 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
+S A IQ ++ L+ L + L + PN WDD A +I + L +
Sbjct: 6 RSEIEAFEPHIQEMRDALEIDRLKSEIAQLEEKTLTPNFWDDAQAAQKILQTLNQLKETV 65
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
++ +A +++ + + +I+L E++D L E +++ +E L LL G D +
Sbjct: 66 EKFEAIKKKWEDLMTLIELGIEDHDEGLYGEISAEAEEFKKEFEEMRLKTLLRGRYDKNN 125
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
+ + AGAGGTE+ DW M+L+MY WA+ +GY+V ++D +PGE AGIK ATI V+G Y
Sbjct: 126 AILSLHAGAGGTEAQDWVQMLLRMYTRWAEDKGYKVKVLDMLPGEEAGIKSATILVEGPY 185
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
A+GY K+E GVHRLVRISPFD+ RRHTSFA+V VIP D V+I DL+IE FRS
Sbjct: 186 AYGYLKSEQGVHRLVRISPFDAAGRRHTSFASVDVIPEIED-DIEVEIKPEDLKIETFRS 244
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQM 385
GGAGGQ+ N T+SAVRI HIPTGI TCQNERSQ N+ +AM +L++++ L + Q +
Sbjct: 245 GGAGGQYVNKTESAVRITHIPTGIVVTCQNERSQQSNRNTAMKLLRAKLFNLYLEEQQKK 304
Query: 386 NAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSA 443
E +I+WGNQIR+YV HPY +VKD RTN EV + +V++G++D FI +YL +
Sbjct: 305 INELRGEQKEIAWGNQIRSYVFHPYSLVKDHRTNVEVGNVQAVMDGEIDMFINAYLKS 362
>gi|294668116|ref|ZP_06733223.1| peptide chain release factor 2 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291309824|gb|EFE51067.1| peptide chain release factor 2 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 367
Score = 304 bits (778), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 148/320 (46%), Positives = 215/320 (67%), Gaps = 2/320 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
P LW+DP A I +E L G + + + ++ +I++ EEND E E +
Sbjct: 46 PELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLIEMTVEENDEEGFAAVQEDV 105
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
+ ++ + E + + DP +C+I++ AGAGGTE+ DWA M+ +MY +A+R+G+++
Sbjct: 106 AGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDWAGMLFRMYSRYAERKGFKI 165
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
+++E GEIAGI RATI+V+GEYA+G + E GVHRLVR SPFDS +RHTSF++V V
Sbjct: 166 EILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRYSPFDSNNKRHTSFSSVFVY 225
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D S ++IN +DLRI+ +R+ GAGGQH N TDSAVRI H PTGI CQN+RSQH
Sbjct: 226 PEI-DDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGIVVQCQNDRSQHA 284
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
NKA+AM +L+S++ +LE+ ++ + + +D+ WG+QIR+YVL R +KDLRT YE
Sbjct: 285 NKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIRSYVLDSSR-IKDLRTGYE 343
Query: 422 VSDPDSVLEGDLDGFILSYL 441
V + +VL+GDLDGFI + L
Sbjct: 344 VGNTKAVLDGDLDGFIEASL 363
>gi|90424348|ref|YP_532718.1| peptide chain release factor 2 [Rhodopseudomonas palustris BisB18]
gi|90106362|gb|ABD88399.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodopseudomonas
palustris BisB18]
Length = 322
Score = 304 bits (778), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 153/307 (49%), Positives = 215/307 (70%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
+E SL + + E+EL +++DMI+L END + E+ AL ++++ +EL+A
Sbjct: 2 QERTSLEDSLGGIGKVERELTDNVDMIELGEAENDEGVVAEAEAALKALKKEVARRELEA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+EV AGAGGTES DWASM+L+MY WA++ G+++ ++E GE AGIK
Sbjct: 62 LLSGEADRFDSYLEVHAGAGGTESQDWASMLLRMYTRWAEKHGFKIEYLEETQGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI++ G A+G+ K E GVHRLVRISPFDS RRHTSF++V + P D++ + I E
Sbjct: 122 SATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVV-DNTIKIDIAE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD+R++ RSGGAGGQH N T+SAVR+ HIPTG+ CQ RSQH+NKA A +L++R+
Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNKAQAWDMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
++E+ ++ + A + TDI WG+QIR+YVL PY+MVKDLRT + SD VL+GDLD
Sbjct: 241 EIELKKREEQAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDE 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMGATLA 307
>gi|123443573|ref|YP_001007546.1| peptide chain release factor 2 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|166225120|sp|A1JPL5.1|RF2_YERE8 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|122090534|emb|CAL13403.1| peptide chain release factor 2 [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 365
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 152/360 (42%), Positives = 231/360 (64%), Gaps = 2/360 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
K+ ++ V++ L + RL ++AEL +P++W++P A + +E SL +
Sbjct: 8 KNRIQDLSDRTAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEEIV 67
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
+ +Q + + +++LA E +D E E++ L + K + E + SGE D +
Sbjct: 68 TTIDQLDQGMDDVTGLLELAIEADDEETFNEAVAELDILDGKLGQLEFRRMFSGEYDSAN 127
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
CY+++QAG+GGTE+ DWASM+L+MY WA+ +G++ +++E G++AG+K ATIK+ G+Y
Sbjct: 128 CYLDLQAGSGGTEAQDWASMLLRMYLRWAEAKGFKTEIIEESDGDVAGLKSATIKIIGDY 187
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
AFG+ + E GVHRLVR SPFDSG RRHTSF++ V P D ++IN +DLRI+ +R+
Sbjct: 188 AFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEV-DDDIDIEINPADLRIDVYRA 246
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQM 385
GAGGQH N T+SAVRI HIPT I CQN+RSQH+NK AM L++++ + E+ ++
Sbjct: 247 SGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAD 306
Query: 386 NAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ +DI WG+QIR+YVL R +KDLRT E + +VL+GDLD FI + L A L
Sbjct: 307 KQMLEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASLKAGL 365
>gi|39546356|ref|NP_461957.2| peptide chain release factor 2 [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|378451816|ref|YP_005239176.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|379702298|ref|YP_005244026.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|267995195|gb|ACY90080.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|323131397|gb|ADX18827.1| peptide chain release factor 2 [Salmonella enterica subsp. enterica
serovar Typhimurium str. ST4/74]
gi|379657328|emb|CBW19116.2| peptide chain release factor 2 (RF-2) [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
Length = 358
Score = 303 bits (777), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 154/335 (45%), Positives = 221/335 (65%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++AEL +P++W++P A + +E SL + + Q L + +++LA E +D
Sbjct: 26 RLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTLDQMTQGLDDVSGLLELAVEADD 85
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
E E++ L T+ K + E + SGE D CY+++QAG+GGTE+ DWASM+L+MY
Sbjct: 86 EETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLLRMY 145
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA+ RG++ +++E GE+AGIK ATIK+ GEYA+G+ + E GVHRLVR SPFDSG R
Sbjct: 146 LRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAYGWLRTETGVHRLVRKSPFDSGGR 205
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSF++ V P D + IN +DLRI+ +R+ GAGGQH N T+SAVRI HIPTGI
Sbjct: 206 RHTSFSSAFVYPEV-DDDIDIDINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTGIV 264
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+NK AM +++++ +LE+ ++ + +DI WG+QIR+YVL
Sbjct: 265 TQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDTKSDIGWGSQIRSYVLDDS 324
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E + +VL+G LD FI + L A L
Sbjct: 325 R-IKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL 358
>gi|298370446|ref|ZP_06981762.1| peptide chain release factor 2 [Neisseria sp. oral taxon 014 str.
F0314]
gi|298281906|gb|EFI23395.1| peptide chain release factor 2 [Neisseria sp. oral taxon 014 str.
F0314]
Length = 367
Score = 303 bits (777), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 148/320 (46%), Positives = 215/320 (67%), Gaps = 2/320 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
P LW+DP A I +E L G + + + ++ +I++ EEND E E +
Sbjct: 46 PELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLIEMTVEENDEEGFAAVQEDV 105
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
+ ++ + E + + DP +C+I++ AGAGGTE+ DWA M+ +MY +A+R+G+++
Sbjct: 106 AGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDWAGMLFRMYSRYAERKGFKI 165
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
+++E GEIAGI RATI+++GEYA+G + E GVHRLVR SPFDS +RHTSFA+V V
Sbjct: 166 DILEEDDGEIAGINRATIRLEGEYAYGLLRTETGVHRLVRYSPFDSNNKRHTSFASVFVY 225
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D S ++IN +DLRI+ +R+ GAGGQH N TDSAVRI H PTGI CQN+RSQH
Sbjct: 226 PEI-DDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGIVVQCQNDRSQHA 284
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
NKA+AM +L+S++ +LE+ ++ + + +D+ WG+QIR+YVL R +KDLRT YE
Sbjct: 285 NKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIRSYVLDSSR-IKDLRTGYE 343
Query: 422 VSDPDSVLEGDLDGFILSYL 441
V + +VL+GDLDGFI + L
Sbjct: 344 VGNTKAVLDGDLDGFIEASL 363
>gi|319404230|emb|CBI77823.1| peptide chain release factor RF-2 [Bartonella rochalimae ATCC
BAA-1498]
Length = 317
Score = 303 bits (777), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 153/307 (49%), Positives = 208/307 (67%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE +L M + F Q L E I++I + EEND E+ E+ + ++ + +K+++
Sbjct: 3 RERQNLEDSMNSTQLFTQMLEECIELIAMGEEENDVEIITEAENTIRQLKSEIDKKQIET 62
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+EV AGAGGTES DWASM+L+MY WA++ +V +++ GE AGIK
Sbjct: 63 LLSGEADSNDTYLEVHAGAGGTESQDWASMLLRMYTRWAEQHKMKVEILETHDGEEAGIK 122
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI V G A+G K E GVHRLVRISP+DS RRHTSFA++ V P D + V ++E
Sbjct: 123 SATILVKGYNAYGLLKTESGVHRLVRISPYDSNARRHTSFASIWVYP-VVDENIEVDLSE 181
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD+RI+ +R+ GAGGQH NTTDSAVRI HI TGI CQ ERSQH+NKA+A +L++R+
Sbjct: 182 SDVRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNKATAWSMLRARLY 241
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ ++ + T+I WG+QIR+YVL PY++VKDLRT E +DP +VL GDLD
Sbjct: 242 EEELKKREEATNAVEAFKTEIGWGHQIRSYVLQPYQLVKDLRTGVENADPQTVLNGDLDT 301
Query: 436 FILSYLS 442
FI + L+
Sbjct: 302 FIEAALA 308
>gi|339325257|ref|YP_004684950.1| peptide chain release factor 2 [Cupriavidus necator N-1]
gi|338165414|gb|AEI76469.1| peptide chain release factor 2 [Cupriavidus necator N-1]
Length = 357
Score = 303 bits (777), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 156/337 (46%), Positives = 228/337 (67%), Gaps = 6/337 (1%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL+ ++ L P++W++P A + +E ++ G + + +L ++ +LAREE D
Sbjct: 25 RLDEVNGLLEDPDVWNNPKRAQDLGKEKKAIEGVVSVLSKLTDDLSGAEELFELAREEGD 84
Query: 171 TELELESLEA-LLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
+ LE++EA + E + SGE+D + +I++QAGAGGTE+ DWASM+L+
Sbjct: 85 DDT-LEAIEADVKGFEEIVAGMEFRRMFSGEMDQANAFIDIQAGAGGTEACDWASMLLRQ 143
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y + +R+G++ +++E G++AGIK ATIK++GEYAFGY + E GVHRLVR SPFDS
Sbjct: 144 YLKYCERKGFKAEVLEESEGDVAGIKSATIKIEGEYAFGYLRTETGVHRLVRKSPFDSSG 203
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RHTSF++V V P D S V++N +DLR++ +R+ GAGGQH N TDSAVRI HIPTGI
Sbjct: 204 GRHTSFSSVFVYPEV-DDSFEVEVNPADLRVDTYRASGAGGQHINKTDSAVRITHIPTGI 262
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQS-LTDISWGNQIRTYVLH 408
CQN+RSQH+N+A AM +L+SR+ + E+ R+ Q A+ ++ TD+ WG+QIR+YVL
Sbjct: 263 VVQCQNDRSQHRNRAEAMSMLKSRLYEHEM-RKRQAEADKLEAGKTDVGWGHQIRSYVLD 321
Query: 409 PYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRTN E+S+ VL+GDLD FI + L L
Sbjct: 322 QSR-IKDLRTNVEMSNTQKVLDGDLDPFIEASLKQGL 357
>gi|261365043|ref|ZP_05977926.1| peptide chain release factor 2 [Neisseria mucosa ATCC 25996]
gi|296313763|ref|ZP_06863704.1| peptide chain release factor 2 [Neisseria polysaccharea ATCC 43768]
gi|288566638|gb|EFC88198.1| peptide chain release factor 2 [Neisseria mucosa ATCC 25996]
gi|296839690|gb|EFH23628.1| peptide chain release factor 2 [Neisseria polysaccharea ATCC 43768]
Length = 367
Score = 303 bits (777), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 148/320 (46%), Positives = 215/320 (67%), Gaps = 2/320 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
P LW+DP A I +E L G + + + ++ +I++ EEND E E +
Sbjct: 46 PELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLIEMTVEENDEEGFAAVQEDV 105
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
+ ++ + E + + DP +C+I++ AGAGGTE+ DWA M+ +MY +A+R+G+++
Sbjct: 106 AGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDWAGMLFRMYSRYAERKGFKI 165
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
+++E GEIAGI RATI+V+GEYA+G + E GVHRLVR SPFDS +RHTSF++V V
Sbjct: 166 EILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRYSPFDSNNKRHTSFSSVFVY 225
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D S ++IN +DLRI+ +R+ GAGGQH N TDSAVRI H PTGI CQN+RSQH
Sbjct: 226 PEI-DDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGIVVQCQNDRSQHA 284
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
NKA+AM +L+S++ +LE+ ++ + + +D+ WG+QIR+YVL R +KDLRT YE
Sbjct: 285 NKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIRSYVLDSSR-IKDLRTGYE 343
Query: 422 VSDPDSVLEGDLDGFILSYL 441
V + +VL+GDLDGFI + L
Sbjct: 344 VGNTKAVLDGDLDGFIEASL 363
>gi|440286288|ref|YP_007339053.1| bacterial peptide chain release factor 2 (bRF-2)
[Enterobacteriaceae bacterium strain FGI 57]
gi|440045810|gb|AGB76868.1| bacterial peptide chain release factor 2 (bRF-2)
[Enterobacteriaceae bacterium strain FGI 57]
Length = 365
Score = 303 bits (777), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 151/348 (43%), Positives = 224/348 (64%), Gaps = 2/348 (0%)
Query: 98 VIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLE 157
V++ L + RL ++AEL +P++W++P A + +E SL + + Q L +
Sbjct: 20 VLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTLDQMSQGLED 79
Query: 158 HIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGT 217
+++LA E +D E E++ L T+ K ++ E + SGE D CY+++QAG+GGT
Sbjct: 80 VSGLLELAVEADDEETFNEAVAELDTLEEKLEQLEFRRMFSGEYDSADCYLDIQAGSGGT 139
Query: 218 ESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVH 277
E+ DWASM+ +MY WA+ RG++ +++E GE+AGIK TIK+ G+YA+G+ + E GVH
Sbjct: 140 EAQDWASMLERMYLRWAEARGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVH 199
Query: 278 RLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTD 337
RLVR SPFDSG RRHTSF++ V P D ++IN +DLRI+ +R+ GAGGQH N T+
Sbjct: 200 RLVRKSPFDSGGRRHTSFSSAFVYPEV-DDDIDIEINPADLRIDVYRASGAGGQHVNRTE 258
Query: 338 SAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDIS 397
SAVRI HIPT CQN+RSQH+NK AM +++++ +LE+ ++ + +DI
Sbjct: 259 SAVRITHIPTNTVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIG 318
Query: 398 WGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
WG+QIR+YVL R +KDLRT E + +VL+G LD FI + L A L
Sbjct: 319 WGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL 365
>gi|152985089|ref|YP_001346821.1| peptide chain release factor 2 [Pseudomonas aeruginosa PA7]
gi|150960247|gb|ABR82272.1| peptide chain release factor 2 [Pseudomonas aeruginosa PA7]
Length = 382
Score = 303 bits (777), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 160/366 (43%), Positives = 228/366 (62%), Gaps = 11/366 (3%)
Query: 85 WKSHAAAIAQSIQVIKKR-----LQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHG 139
WKS ++ A R + + RL ++ EL PN+W++P +A + RE
Sbjct: 19 WKSTRSSTASRTSPSAPRPFGGIFDYDQKHDRLVEVNRELEDPNVWNNPEYAQNLGRERA 78
Query: 140 SLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSG 199
L ++ + L + D++ +A EE D + + +R ++ E + SG
Sbjct: 79 QLAQVVETLDDLTSGLADSRDLLDMAVEEGDEGAVGDVAGEVERLREILEKLEFRRMFSG 138
Query: 200 ELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATI 259
E+DP + Y+++QAG+GGTE+ DWA+M+L+MY WA + G+ T+++ GE+AGIK AT+
Sbjct: 139 EMDPNNAYLDIQAGSGGTEAQDWANMLLRMYLRWADKHGFDATIIELSEGEVAGIKGATV 198
Query: 260 KVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLR 319
V GEYAFG+ + E+GVHRLVR SPFDSG RRHTSF AV V P D + ++IN +DLR
Sbjct: 199 HVKGEYAFGWLRTEIGVHRLVRKSPFDSGNRRHTSFTAVFVSPEI-DDNIEIEINPADLR 257
Query: 320 IERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI 379
I+ +RS GAGGQH NTTDSAVRI H+PT CQNERSQH NK +AM +L++++ + E+
Sbjct: 258 IDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYEQEM 317
Query: 380 ARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILS 439
++ + + +DI WG+QIR+YVL R +KDLRT E SD D VL+GDLD
Sbjct: 318 QKRTAASQALEDTKSDIGWGHQIRSYVLDQSR-IKDLRTGIERSDCDKVLDGDLD----E 372
Query: 440 YLSASL 445
YL ASL
Sbjct: 373 YLEASL 378
>gi|323135929|ref|ZP_08071012.1| peptide chain release factor 2 [Methylocystis sp. ATCC 49242]
gi|322399020|gb|EFY01539.1| peptide chain release factor 2 [Methylocystis sp. ATCC 49242]
Length = 322
Score = 303 bits (777), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 149/307 (48%), Positives = 207/307 (67%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L +M + ++L + + +++L E D + E E +EAL + + ++ ++++A
Sbjct: 2 RERTQLEEQMGAIDKLSRDLEDALTLVELGEEAGDEDTEKEGVEALKAVLKDAQRRQIEA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
L SGE D +IE+ +GAGGTES DWA M+ +MY WA+R+ ++V +++E GE AGIK
Sbjct: 62 LFSGEADGNDTFIEIHSGAGGTESQDWARMLFRMYARWAERKKFKVEVIEETAGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
T+ V G A G+AK E GVHRLVRISPFDS RRHTSFA+V V P D V INE
Sbjct: 122 SGTLLVKGHNAHGWAKTESGVHRLVRISPFDSNARRHTSFASVWVYPVV-DDRIEVNINE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD RI+ +RS GAGGQH NTTDSA+RI HIPTGI CQ ERSQH+N+A+A +L++R+
Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAIRITHIPTGIVVACQAERSQHKNRATAWNMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+LE+ ++ + S TDI WG+QIR+YVL PY++VKDLRT P VL+G+LD
Sbjct: 241 ELELEKREAEANKAAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVTSGTPSEVLDGELDD 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMQASLA 307
>gi|113867189|ref|YP_725678.1| protein chain release factor B [Ralstonia eutropha H16]
gi|113525965|emb|CAJ92310.1| protein chain release factor B (RF-2) [Ralstonia eutropha H16]
Length = 357
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 156/337 (46%), Positives = 228/337 (67%), Gaps = 6/337 (1%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL+ ++ L P++W++P A + +E ++ G + + +L ++ +LAREE D
Sbjct: 25 RLDEVNGLLEDPDVWNNPKRAQDLGKEKKAIEGVVSVLSKLTDDLSGAEELFELAREEGD 84
Query: 171 TELELESLEA-LLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
+ LE++EA + E + SGE+D + +I++QAGAGGTE+ DWASM+L+
Sbjct: 85 DDT-LEAIEADVKGFEEIVAGMEFRRMFSGEMDQANAFIDIQAGAGGTEACDWASMLLRQ 143
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y + +R+G++ +++E G++AGIK ATIK++GEYAFGY + E GVHRLVR SPFDS
Sbjct: 144 YLKYCERKGFKAEVLEESEGDVAGIKSATIKIEGEYAFGYLRTETGVHRLVRKSPFDSSG 203
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RHTSF++V V P D S V++N +DLR++ +R+ GAGGQH N TDSAVRI HIPTGI
Sbjct: 204 GRHTSFSSVFVYPEV-DDSFEVEVNPADLRVDTYRASGAGGQHINKTDSAVRITHIPTGI 262
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQS-LTDISWGNQIRTYVLH 408
CQN+RSQH+N+A AM +L+SR+ + E+ R+ Q A+ ++ TD+ WG+QIR+YVL
Sbjct: 263 VVQCQNDRSQHRNRAEAMSMLKSRLYEHEM-RKRQAEADKLEAGKTDVGWGHQIRSYVLD 321
Query: 409 PYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRTN E+S+ VL+GDLD FI + L L
Sbjct: 322 QSR-IKDLRTNVEMSNTQKVLDGDLDPFIEASLKQGL 357
>gi|56478734|ref|YP_160323.1| peptide chain release factor 2 [Aromatoleum aromaticum EbN1]
gi|81598559|sp|Q5NZU2.1|RF2_AZOSE RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|56314777|emb|CAI09422.1| peptide chain release factor 2 (RF-2),gene containing programmed
frameshift site [Aromatoleum aromaticum EbN1]
Length = 367
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 159/359 (44%), Positives = 229/359 (63%), Gaps = 11/359 (3%)
Query: 91 AIAQSIQVIKKR-------LQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
AIAQ + ++ R L + + +L ++ L P +W++ A + +E L
Sbjct: 8 AIAQQLDDLRARGRELRRYLDYDEKSSKLEEVTRALEDPAVWNNAEKAQELGKEKRQLED 67
Query: 144 KMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALL-TMRRKSKEKELDALLSGELD 202
+ ++ E + D+ LA E+D E L ++EA + ++ K E + S +D
Sbjct: 68 VVHNLRDIESLSSDLKDLFDLAEAEDD-EDTLAAVEADIGELQAKVHALEFRRMFSNPMD 126
Query: 203 PCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVD 262
P C+IE+QAGAGGTE+ DWA M+ +MY + +R+G+ V LM+E GE+AGIK ATIKV
Sbjct: 127 PNPCFIEIQAGAGGTEAQDWAGMLERMYLRYCERKGFNVELMEESEGEVAGIKGATIKVS 186
Query: 263 GEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIER 322
G+YA+G+ + E G+HRLVR SPFDS RRHTSF++V V P D S + IN +DLRI+
Sbjct: 187 GDYAYGFLRTETGIHRLVRKSPFDSNARRHTSFSSVFVYPEV-DDSIQIDINPADLRIDT 245
Query: 323 FRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ 382
+R+ GAGGQH N TDSAVRI H PTG+ CQN+RSQH+NKA AM +L++R+ +LE+ ++
Sbjct: 246 YRASGAGGQHINKTDSAVRITHEPTGVVVQCQNDRSQHKNKAEAMSMLKARLYELELRKR 305
Query: 383 AQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
+ S +DI WG+QIR+YVL R +KDLRTN+EV + +VL+GDLD FI + L
Sbjct: 306 QSEQQKLEDSKSDIGWGHQIRSYVLDQSR-IKDLRTNFEVGNTQAVLDGDLDDFIAASL 363
>gi|300312096|ref|YP_003776188.1| peptide chain release factor 2 [Herbaspirillum seropedicae SmR1]
gi|300074881|gb|ADJ64280.1| peptide chain release factor 2 (RF-2) protein [Herbaspirillum
seropedicae SmR1]
Length = 337
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 144/331 (43%), Positives = 223/331 (67%), Gaps = 2/331 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
+L ++AEL PN+W+D A + +E SL + + + EL + D+ ++AREE D
Sbjct: 5 KLEQVNAELEDPNVWNDQKRAQDLGKEKKSLEAIVHTLIKIDSELTDARDLFEMAREEKD 64
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
+ + +++ +E E + SG +D +C+I++QAGAGGTE+ DWASM+L+ Y
Sbjct: 65 EDTIIAIEGDAENLKKMVEEMEFRRMFSGPMDANNCFIDIQAGAGGTEAQDWASMLLRQY 124
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
+ +R+G++ ++++ GE+AGIK ATIKV+GEYA+G+ + E GVHRLVR SPFDS
Sbjct: 125 LRYCERKGFKAEILEQSDGEVAGIKTATIKVEGEYAYGFLRTETGVHRLVRKSPFDSSNG 184
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSF+++ V P D S ++IN +D+R++ +R+ GAGGQH N TDSAVR+ H P+GI
Sbjct: 185 RHTSFSSLFVYPEV-DESFEIEINPADVRVDTYRASGAGGQHINKTDSAVRLTHAPSGIV 243
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+N+A A +L++++ +LE+ ++ + S TD+ WG+QIR+YVL
Sbjct: 244 VQCQNDRSQHRNRAEAWDMLRAKLFELELRKRMSEQQKLEDSKTDVGWGHQIRSYVLDQS 303
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
R +KDLRTN+E + +VL+GD+D FI + L
Sbjct: 304 R-IKDLRTNFETGNTKAVLDGDIDDFIAASL 333
>gi|419798487|ref|ZP_14323894.1| peptide chain release factor 2 [Neisseria sicca VK64]
gi|385694535|gb|EIG25132.1| peptide chain release factor 2 [Neisseria sicca VK64]
Length = 367
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 149/320 (46%), Positives = 214/320 (66%), Gaps = 2/320 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
P LW+DP A I +E L G + + + ++ +I++ EEND E E
Sbjct: 46 PELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLIEMTVEENDEEGFAAVQEDE 105
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
+ ++ + E + + DP +C+I++ AGAGGTE+ DWA M+ +MY +A+R+G+++
Sbjct: 106 AGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDWAGMLFRMYSRYAERKGFKI 165
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
+++E GEIAGI RATI+V+GEYA+G + E GVHRLVR SPFDS +RHTSFA+V V
Sbjct: 166 EILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRYSPFDSNNKRHTSFASVFVY 225
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D S ++IN +DLRI+ +R+ GAGGQH N TDSAVRI H PTGI CQN+RSQH
Sbjct: 226 PEI-DDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGIVVQCQNDRSQHA 284
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
NKA+AM +L+S++ +LE+ ++ + + +D+ WG+QIR+YVL R +KDLRT YE
Sbjct: 285 NKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIRSYVLDSSR-IKDLRTGYE 343
Query: 422 VSDPDSVLEGDLDGFILSYL 441
V + +VL+GDLDGFI + L
Sbjct: 344 VGNTKAVLDGDLDGFIEASL 363
>gi|342218238|ref|ZP_08710860.1| peptide chain release factor 2 [Megasphaera sp. UPII 135-E]
gi|341590673|gb|EGS33909.1| peptide chain release factor 2 [Megasphaera sp. UPII 135-E]
Length = 341
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 159/334 (47%), Positives = 210/334 (62%), Gaps = 3/334 (0%)
Query: 115 LSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELE 174
L ++ P+ W+DP A IS+E +L ++ + + E D + LA EE + L
Sbjct: 3 LDIRMSDPDFWNDPERARNISQEATALKEAVEAHYSLIRRAEELYDYVSLAIEEGEISL- 61
Query: 175 LESLEALLTMRRKSKEK-ELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSW 233
L LE + EK E+ LLSGE D C+ I AGAGGTE+ DWA M+++MY W
Sbjct: 62 LNELETQYKQLLEEVEKQEIRLLLSGEYDHCNAIITFHAGAGGTEAQDWAQMLIRMYTRW 121
Query: 234 AQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHT 293
A+R GY + LMD PG+ AG+K AT V G+ A+GY K+E GVHRLVRISPFD+ RRHT
Sbjct: 122 AERSGYTLVLMDLQPGDEAGVKSATFGVVGDLAYGYLKSEKGVHRLVRISPFDAAARRHT 181
Query: 294 SFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATC 353
SF AV V+P + +QIN D+R++ FR+ GAGGQH N T SAVR+ HIPTGI C
Sbjct: 182 SFTAVDVMPELPE-DVDIQINMDDVRVDYFRASGAGGQHVNKTSSAVRMTHIPTGIVVQC 240
Query: 354 QNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMV 413
QNERSQ QNK + L++++ +LE +QAQ+ AE I WG+QIR+YV HPY +V
Sbjct: 241 QNERSQLQNKEMCLKYLRAKLFELEQEKQAQLKAEIGGVHQAIEWGSQIRSYVFHPYNLV 300
Query: 414 KDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDK 447
KD RTN E + +V++GDLD FI YL +K
Sbjct: 301 KDHRTNVETGNVQAVMDGDLDMFIEGYLQQEKNK 334
>gi|374702748|ref|ZP_09709618.1| peptide chain release factor 1 [Pseudomonas sp. S9]
Length = 310
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 151/312 (48%), Positives = 214/312 (68%), Gaps = 2/312 (0%)
Query: 134 ISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKEL 193
+ RE SL ++ + + L + D++++A EE+D + + +R ++ E
Sbjct: 1 MGRERASLALIVETLDDLQTGLADCADLLEMAAEEDDQGAVDDVATEVERLREILEKLEF 60
Query: 194 DALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAG 253
+ SGE+DP + Y+++QAG+GGTE+ DWA+M+L+MY WA +RG+ T+M+ GE+AG
Sbjct: 61 RRMFSGEMDPNNAYLDIQAGSGGTEAQDWANMLLRMYLRWADKRGFDATIMELSAGEVAG 120
Query: 254 IKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQI 313
IK AT+ + GEYAFG+ + E+GVHRLVR SPFDSG RRHTSF AV V P D + ++I
Sbjct: 121 IKGATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGNRRHTSFTAVFVSPEI-DDNIEIEI 179
Query: 314 NESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSR 373
N +DLRI+ +RS GAGGQH NTTDSAVRI H+PT +CQNERSQH NK +AM +L+++
Sbjct: 180 NPADLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRAK 239
Query: 374 VNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDL 433
+ + EI ++ + E S +DI WG+QIR+YVL R +KDLRTN E S+ D+VL+GDL
Sbjct: 240 LYEQEIQKRNAASQELEDSKSDIGWGHQIRSYVLDQSR-IKDLRTNIENSNCDAVLDGDL 298
Query: 434 DGFILSYLSASL 445
DGFI + L L
Sbjct: 299 DGFIEASLKQGL 310
>gi|330814308|ref|YP_004358547.1| peptide chain release factor 2 [Candidatus Pelagibacter sp.
IMCC9063]
gi|327487403|gb|AEA81808.1| peptide chain release factor 2 [Candidatus Pelagibacter sp.
IMCC9063]
Length = 312
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 148/304 (48%), Positives = 206/304 (67%), Gaps = 1/304 (0%)
Query: 134 ISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKEL 193
+ +E L + + K++++EL ++++L ++ND L E +L + K +E EL
Sbjct: 2 VIKEKNHLERILNDYKSYKEELTNIKELVELNTKDNDENLTKELEMSLKKLELKIREIEL 61
Query: 194 DALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAG 253
LS + D Y+E+ AGAGGTES DWA M+ MY WA+++ + +L+ E GE G
Sbjct: 62 FCFLSKKNDELDVYVEIHAGAGGTESQDWAEMLRTMYIKWAEKKSFSFSLISETKGEEVG 121
Query: 254 IKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQI 313
K +TIK++G+YA+G+ + E GVHRLVRISPFDS KRRHTSFA+V V P +S V I
Sbjct: 122 FKSSTIKIEGKYAYGFLRHESGVHRLVRISPFDSDKRRHTSFASVWVYPVVNESVV-VDI 180
Query: 314 NESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSR 373
N+ DLRI+ +RS GAGGQH NTTDSAVRI H PT I CQNERSQH+NK +AM +L++R
Sbjct: 181 NDKDLRIDTYRSSGAGGQHVNTTDSAVRITHQPTNIVVQCQNERSQHKNKDTAMNMLKAR 240
Query: 374 VNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDL 433
+ +LE+ ++ + + S TDI WG+QIR+YVL PY+MVKD RT E +DPD VL+G L
Sbjct: 241 LYELELQKKKEESKSVESSKTDIGWGHQIRSYVLQPYQMVKDSRTGLERTDPDKVLDGHL 300
Query: 434 DGFI 437
+ F+
Sbjct: 301 NPFL 304
>gi|433514512|ref|ZP_20471294.1| peptide chain release factor 2 [Neisseria meningitidis 63049]
gi|432245474|gb|ELL00944.1| peptide chain release factor 2 [Neisseria meningitidis 63049]
Length = 367
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 148/320 (46%), Positives = 214/320 (66%), Gaps = 2/320 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
P LW+DP A I +E L G + + + ++ +I++ EEND E E +
Sbjct: 46 PELWNDPKRAQEIGKERKILEGIVLTLDNIATGIEDNRMLIEMTVEENDEEGFAAVQEDV 105
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
+ ++ + E + + DP +C+I++ AGAGGTE+ DWA M+ +MY +A+R+G+++
Sbjct: 106 AGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDWAGMLFRMYSRYAERKGFKI 165
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
+++E GEIAGI ATI+V+GEYA+G + E GVHRLVR SPFDS +RHTSFA+V V
Sbjct: 166 EILEEDDGEIAGINHATIRVEGEYAYGLLRTETGVHRLVRYSPFDSNNKRHTSFASVFVY 225
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D S ++IN +DLRI+ +R+ GAGGQH N TDSAVRI H PTGI CQN+RSQH
Sbjct: 226 PEI-DDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGIVVQCQNDRSQHA 284
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
NKA+AM +L+S++ +LE+ ++ + + +D+ WG+QIR+YVL R +KDLRT YE
Sbjct: 285 NKAAAMEILKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIRSYVLDSSR-IKDLRTGYE 343
Query: 422 VSDPDSVLEGDLDGFILSYL 441
V + +VL+GDLDGFI + L
Sbjct: 344 VGNTKAVLDGDLDGFIEASL 363
>gi|374291001|ref|YP_005038036.1| peptide chain release factor 2 (RF-2) [Azospirillum lipoferum 4B]
gi|357422940|emb|CBS85782.1| Peptide chain release factor 2 (RF-2) [Azospirillum lipoferum 4B]
Length = 322
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 146/310 (47%), Positives = 211/310 (68%), Gaps = 1/310 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + ++ E++L + +++I++ E D + ++ L +R ++ + ++++
Sbjct: 2 RERTQLEASVSGYRSLERDLSDSLELIEMGEAEGDATVVADAEAQLYGLRDRANKLQIES 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D C++EV AGAGGTE+ DWA M+++MY WA++ GY+ +DE PGE AGIK
Sbjct: 62 LLSGEADANDCFVEVNAGAGGTEAQDWALMLMRMYTRWAEQHGYKAEWLDETPGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
AT+++ G A+G+ K E GVHRLVRISPFDS RR TSFAAV+V P D ++INE
Sbjct: 122 SATVQIKGHNAYGWLKTEAGVHRLVRISPFDSQARRQTSFAAVSVSPVI-DDKIDIEINE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
D RI+ +R+ GAGGQH N TDSAVRI HIPT I +CQ ERSQH+N+A A +L++R+
Sbjct: 181 KDCRIDTYRASGAGGQHINKTDSAVRITHIPTNIVVSCQQERSQHKNRAKAWDMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ + A + TDI WG+QIR+YVLHPY+MVKDLRT+ E S +VL+G LD
Sbjct: 241 ERELKIREDAAAALEATKTDIGWGHQIRSYVLHPYQMVKDLRTDVETSQSQAVLDGALDP 300
Query: 436 FILSYLSASL 445
F+ + L++ +
Sbjct: 301 FLEAALASRI 310
>gi|150021425|ref|YP_001306779.1| peptide chain release factor 2 [Thermosipho melanesiensis BI429]
gi|166225118|sp|A6LN93.1|RF2_THEM4 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|149793946|gb|ABR31394.1| peptide chain release factor 2 [Thermosipho melanesiensis BI429]
Length = 369
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 147/268 (54%), Positives = 192/268 (71%), Gaps = 2/268 (0%)
Query: 175 LESLEALLT-MRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSW 233
L++++ L+ + RK K EL+ +L+ + D + Y+ + GAGGTES DWASM+L+MY W
Sbjct: 93 LDTIKQLIDDIERKVKTFELELILNEKFDSSNAYLSIHPGAGGTESQDWASMLLRMYMRW 152
Query: 234 AQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHT 293
A+RRG+ V ++D PGE AGIK A + + GEY +GY K E GVHRLVRISPFD+ KRRHT
Sbjct: 153 AERRGFDVQIVDYQPGEEAGIKSAMLYIKGEYVYGYLKYERGVHRLVRISPFDANKRRHT 212
Query: 294 SFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATC 353
SFA+V V+P D V+IN DLRI+ +R+ GAGGQ+ N T+SAVRI HIPTGI TC
Sbjct: 213 SFASVNVMPEIEDD-IDVEINPEDLRIDTYRASGAGGQYVNKTESAVRITHIPTGIVVTC 271
Query: 354 QNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMV 413
Q ERSQ QNK +AM VL++R+ QLE+ ++ + E L DISWGNQIR+YV PY MV
Sbjct: 272 QTERSQLQNKETAMKVLKARLYQLELEKRQKQLEEIQGELKDISWGNQIRSYVFQPYTMV 331
Query: 414 KDLRTNYEVSDPDSVLEGDLDGFILSYL 441
KD RTN E + D+V++GD+D FI S L
Sbjct: 332 KDHRTNVETGNIDAVMDGDIDIFIESEL 359
>gi|300857995|ref|YP_003782978.1| peptide chain release factor RF-2 [Corynebacterium
pseudotuberculosis FRC41]
gi|375288161|ref|YP_005122702.1| peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis 3/99-5]
gi|384504178|ref|YP_005680848.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis 1002]
gi|384506270|ref|YP_005682939.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis C231]
gi|384508358|ref|YP_005685026.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis I19]
gi|384510450|ref|YP_005690028.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis PAT10]
gi|385807033|ref|YP_005843430.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis 267]
gi|387136117|ref|YP_005692097.1| peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis 42/02-A]
gi|300685449|gb|ADK28371.1| peptide chain release factor RF-2 [Corynebacterium
pseudotuberculosis FRC41]
gi|302205723|gb|ADL10065.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis C231]
gi|302330275|gb|ADL20469.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis 1002]
gi|308275958|gb|ADO25857.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis I19]
gi|341824389|gb|AEK91910.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis PAT10]
gi|348606562|gb|AEP69835.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis 42/02-A]
gi|371575450|gb|AEX39053.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis 3/99-5]
gi|383804426|gb|AFH51505.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis 267]
Length = 366
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 161/347 (46%), Positives = 229/347 (65%), Gaps = 12/347 (3%)
Query: 95 SIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQE 154
++ I+K + + L R+ L + + P LWD+P HA +++ E S+ ++K++ + Q
Sbjct: 15 TLTTIEKVMDPEELASRVRELEQQASDPTLWDNPDHAQKVTTELSSVQAQLKKLTSLRQR 74
Query: 155 LLEHIDMIKLAREE-NDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAG 213
+ + M +LA EE +DTEL E L L + + + E+ +LSGE D I +++G
Sbjct: 75 IDDMPVMYELAEEEGDDTELADEELAELTS---EIESLEVKTMLSGEYDAREAVINIRSG 131
Query: 214 AGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAE 273
AGG ++ DWA M+++MY WA++ +V + D E AGIK AT V GEY +G E
Sbjct: 132 AGGVDAADWAEMLMRMYVRWAEKNDRKVDIYDISYAEEAGIKSATFVVHGEYMYGQLSVE 191
Query: 274 VGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHA 333
G HRLVRISPFD+ RR TSFA + V+P + + H+ I +S++R++ +RS G GGQ
Sbjct: 192 QGAHRLVRISPFDNQGRRQTSFAEIEVLP-VVEQTDHIDIPDSEVRVDVYRSSGPGGQSV 250
Query: 334 NTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ---AQMNAEHT 390
NTTDSAVR+ HIPTGI TCQNE+SQ QNKASAM VLQ+++ LE RQ A+++A
Sbjct: 251 NTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKL--LEKKRQEERAELDA--L 306
Query: 391 QSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
+ + SWGNQ+R+YVLHPY+MVKDLRTNYEV+DP VL+GDLDGF+
Sbjct: 307 GAGGNASWGNQMRSYVLHPYQMVKDLRTNYEVNDPQKVLDGDLDGFL 353
>gi|39997376|ref|NP_953327.1| peptide chain release factor 2 [Geobacter sulfurreducens PCA]
gi|409912720|ref|YP_006891185.1| peptide chain release factor 2 [Geobacter sulfurreducens KN400]
gi|39984267|gb|AAR35654.1| peptide chain release factor 2 [Geobacter sulfurreducens PCA]
gi|307634992|gb|ADI85036.2| peptide chain release factor 2 [Geobacter sulfurreducens KN400]
Length = 372
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 151/328 (46%), Positives = 216/328 (65%), Gaps = 3/328 (0%)
Query: 115 LSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELE 174
L A++ P WD+ A ++ RE + + ++ + +I+L E D E
Sbjct: 35 LEAQIAAPGFWDNNEEAQKVLRERTRIEKLIDLWDRLNRQADDIRVLIELGEEAQD-EAT 93
Query: 175 LESLEALL-TMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSW 233
L+ + AL ++ R+ + E +LSG D SC++ + AGAGGTE+ DWA M+L+MY +
Sbjct: 94 LDEVRALNDSLEREVEGAEFQRMLSGPHDKNSCFVSINAGAGGTEAQDWAEMLLRMYLRY 153
Query: 234 AQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHT 293
+R+G++ + D G+ AG+K AT VDGEYA+GY KAE G+HRLVRISPFDS RRHT
Sbjct: 154 CERKGWKTEITDFQAGDEAGVKSATFTVDGEYAYGYLKAEAGIHRLVRISPFDSNARRHT 213
Query: 294 SFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATC 353
SFA+V V P D ++I ESDLR++ +RS GAGGQH NTTDSAVR+ H+PTGI C
Sbjct: 214 SFASVFVFPEIEDD-IEIKIAESDLRVDTYRSSGAGGQHVNTTDSAVRLTHLPTGIVVAC 272
Query: 354 QNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMV 413
Q ERSQH NKA+A+ +L++++ + E+ + +E DI WG+QIR+YVLHPY+MV
Sbjct: 273 QCERSQHLNKATALRMLRAKLYEKELQEREVQASELAGEKKDIGWGSQIRSYVLHPYKMV 332
Query: 414 KDLRTNYEVSDPDSVLEGDLDGFILSYL 441
KDLRT E +PD+VL+G L+ F++++L
Sbjct: 333 KDLRTGVESGNPDAVLDGALEDFVVAFL 360
>gi|421555995|ref|ZP_16001914.1| peptide chain release factor 2 [Neisseria meningitidis 80179]
gi|402338402|gb|EJU73636.1| peptide chain release factor 2 [Neisseria meningitidis 80179]
Length = 367
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 148/320 (46%), Positives = 214/320 (66%), Gaps = 2/320 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
P LW+DP A I +E L G + + + ++ +I++ EEND E E +
Sbjct: 46 PELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLIEMTVEENDEEGFAAVQEDV 105
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
+ ++ + E + + DP +C+I++ AGAGGTE+ DWA M+ +MY + +R+G+++
Sbjct: 106 AGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDWAGMLFRMYSRYVERKGFKI 165
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
+++E GEIAGI RATI+V+GEYA+G + E GVHRLVR SPFDS +RHTSFA+V V
Sbjct: 166 EILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRYSPFDSNNKRHTSFASVFVY 225
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D S ++IN +DLRI+ +R+ GAGGQH N TDSAVRI H PTGI CQN+RSQH
Sbjct: 226 PEI-DDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGIVVQCQNDRSQHA 284
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
NKA+AM +L+S++ +LE+ ++ + + +D+ WG+QIR+YVL R +KDLRT YE
Sbjct: 285 NKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIRSYVLDSSR-IKDLRTGYE 343
Query: 422 VSDPDSVLEGDLDGFILSYL 441
V + +VL+GDLDGFI + L
Sbjct: 344 VGNTKAVLDGDLDGFIEASL 363
>gi|288941013|ref|YP_003443253.1| peptide chain release factor 2 [Allochromatium vinosum DSM 180]
gi|288896385|gb|ADC62221.1| peptide chain release factor 2 [Allochromatium vinosum DSM 180]
Length = 349
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 163/338 (48%), Positives = 226/338 (66%), Gaps = 8/338 (2%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL + EL P +W+DP A + RE +L + + L + D++ LA EE+D
Sbjct: 17 RLTEVLRELEDPTIWNDPGRAQALGRERATLEAVVLTIDELTGALADADDLLALAAEESD 76
Query: 171 TELELESLEA-LLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
E LESL A L + + E E + SGE+D C+ ++++QAG+GGTE+ DWA M+L+M
Sbjct: 77 -EATLESLVADLKSHEARVSELEFRRMFSGEMDACNAFVDIQAGSGGTEAQDWAEMLLRM 135
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y W +RRG++ LM+ GE+AGIK AT+K +G+YAFG+ + E+GVHRLVR SPFDSG
Sbjct: 136 YLRWGERRGFKTELMEVSAGEVAGIKSATVKFEGDYAFGWLRTEIGVHRLVRKSPFDSGN 195
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RRHTSF++V V P D S ++IN +DLRI+ +R+ GAGGQH N T+SAVRI H PTGI
Sbjct: 196 RRHTSFSSVFVSPEV-DDSVEIEINPADLRIDVYRASGAGGQHVNRTESAVRITHNPTGI 254
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIA--RQAQMNAEHTQSLTDISWGNQIRTYVL 407
CQN+RSQH+NK AM L+S++ +LE+ R +Q E T+S DI WG+QIR+YVL
Sbjct: 255 VVQCQNDRSQHKNKDQAMKQLKSKLYELEMQKRRASQQALEETKS--DIGWGSQIRSYVL 312
Query: 408 HPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E+++ VL+G+LD FI + L + L
Sbjct: 313 DQSR-IKDLRTGVEIANTQGVLDGNLDPFIQASLKSGL 349
>gi|15892291|ref|NP_360005.1| peptide chain release factor 2 [Rickettsia conorii str. Malish 7]
gi|24638155|sp|Q92IQ2.1|RF2_RICCN RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|15619432|gb|AAL02906.1| peptide chain release factor RF-2 [Rickettsia conorii str. Malish
7]
Length = 368
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 157/365 (43%), Positives = 240/365 (65%), Gaps = 11/365 (3%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNV-----RLNLLSAELNKPNLWDDPVHAGRISREHGS 140
+++ I QS++++ W++L+V RLN L P+LW+D +A ++ RE +
Sbjct: 6 ENYVKKIEQSLELL-----WRSLDVEASTERLNALEELTADPSLWNDQANAQKLLREKSN 60
Query: 141 LMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGE 200
L K+ + L + +++ ++A END E + + L + + + E + L SGE
Sbjct: 61 LEEKLNAFNKLKSNLKDALELEEMAEAENDLETLSQIEQDLKNLSIIAAKFETECLFSGE 120
Query: 201 LDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIK 260
D +C++E+ AGAGGTES DWAS++++MY +A+R G++ +++ + GE AGIK TI+
Sbjct: 121 ADGNNCFLEINAGAGGTESHDWASIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIR 180
Query: 261 VDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRI 320
+ G+ A+G+ K E GVHRLVRISPF++ +R TSFA+ V P D + + I + DLRI
Sbjct: 181 IIGKRAYGWFKTETGVHRLVRISPFNAAGKRMTSFASSWVYPEI-DDNIAITIEDKDLRI 239
Query: 321 ERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIA 380
+ FR+ GAGGQH NTTDSAVRI HIPTG CQ++RSQH+NKA AM +LQ+++ +LE+
Sbjct: 240 DTFRASGAGGQHVNTTDSAVRITHIPTGTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQ 299
Query: 381 RQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSY 440
++ E + TD SWG+QIR+YVL PY MVKDLRT+YE SD VL+GDL+ F+ ++
Sbjct: 300 KRTDSVNEQNAAKTDNSWGHQIRSYVLQPYHMVKDLRTDYETSDTKGVLDGDLEEFVSAH 359
Query: 441 LSASL 445
L+ ++
Sbjct: 360 LAMNV 364
>gi|217970376|ref|YP_002355610.1| peptide chain release factor 2 [Thauera sp. MZ1T]
gi|217507703|gb|ACK54714.1| conserved hypothetical protein [Thauera sp. MZ1T]
Length = 367
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 155/349 (44%), Positives = 226/349 (64%), Gaps = 4/349 (1%)
Query: 90 AAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVK 149
A +A + +++ L + +L ++ L P +W++ A + +E L + ++
Sbjct: 14 ADLAARGRELRRYLDYDVKASKLEEVNRALEDPAVWNNAERAQELGKEKRQLEDVVLTLQ 73
Query: 150 AFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEK-ELDALLSGELDPCSCYI 208
+ + + D+ +LA E+D + E++EA L + + EK E + S +DP +C+I
Sbjct: 74 KIDAQSRDLKDLFELAEAEDDDDT-FEAVEADLVELQGAIEKLEFRRMFSNPMDPNNCFI 132
Query: 209 EVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFG 268
E+QAGAGGTE+ DWA M+ +MY + +++G+ V LM+E GE+AGIK TIK GEYA+G
Sbjct: 133 EIQAGAGGTEAQDWAGMLERMYLRYGEKKGFTVELMEETEGEVAGIKNCTIKFSGEYAYG 192
Query: 269 YAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGA 328
Y + E G+HRLVR SPFDS RRHTSF +V V P D S ++IN +DLRI+ +R+ GA
Sbjct: 193 YLRTETGIHRLVRKSPFDSNARRHTSFTSVFVYPEV-DDSIEIEINPADLRIDTYRASGA 251
Query: 329 GGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAE 388
GGQH N TDSAVRI H PTGI CQN+RSQH+NKA AM +L++R+ + E+ ++ +
Sbjct: 252 GGQHINKTDSAVRITHEPTGIVVQCQNDRSQHKNKAEAMSMLKARLYEAELRKRQSEQQK 311
Query: 389 HTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
S +DI WG+QIR+YVL R +KDLRTNYEV + +VL+GDLD FI
Sbjct: 312 LEDSKSDIGWGHQIRSYVLDQSR-IKDLRTNYEVGNTQAVLDGDLDDFI 359
>gi|295676932|ref|YP_003605456.1| hypothetical protein BC1002_1882 [Burkholderia sp. CCGE1002]
gi|295436775|gb|ADG15945.1| conserved hypothetical protein [Burkholderia sp. CCGE1002]
Length = 367
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 156/362 (43%), Positives = 233/362 (64%), Gaps = 13/362 (3%)
Query: 91 AIAQSIQVIKKR-------LQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
AI S+ ++KR L + + +RL ++ EL P++W+D HA + +E L
Sbjct: 8 AIEASLADLRKRADDLRGYLDYDDKALRLIEVNRELEDPDVWNDAKHAQALGKEKKLLDD 67
Query: 144 KMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDP 203
+ ++ + ++ + D+ +AREE D E L + + + E + + DP
Sbjct: 68 TVGKLTSITNDVNDAQDLFDMAREEADDETLLACEADAQAIEARVADMEFRRMFANPADP 127
Query: 204 CSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDG 263
+ ++++QAGAGGTE+ DWASM+L+ Y + +R+G++ ++++ G++AGIK ATIK++G
Sbjct: 128 NNAFLDIQAGAGGTEACDWASMLLRQYLRYCERKGFKTEVLEQTEGDVAGIKNATIKIEG 187
Query: 264 EYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERF 323
EYA+G+ + E GVHRLVR SPFDS RHTSF++V V P D S V+IN +DLRI+ +
Sbjct: 188 EYAYGFLRTETGVHRLVRKSPFDSSGGRHTSFSSVFVYPEI-DDSIEVEINPADLRIDTY 246
Query: 324 RSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQA 383
R+ GAGGQH N TDSAVRI H+P+GI CQN+RSQH+N+A AM +L+SR+ + EI ++
Sbjct: 247 RASGAGGQHINKTDSAVRITHMPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQ 306
Query: 384 QMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSA 443
+ TD+ WG+QIR+YVL R +KDLRTN E+S+ SVL+GDLD FI SA
Sbjct: 307 AEQDKLEAGKTDVGWGHQIRSYVLDNSR-IKDLRTNVEISNTKSVLDGDLDPFI----SA 361
Query: 444 SL 445
SL
Sbjct: 362 SL 363
>gi|421604287|ref|ZP_16046502.1| peptide chain release factor 2 [Bradyrhizobium sp. CCGE-LA001]
gi|404263602|gb|EJZ29067.1| peptide chain release factor 2 [Bradyrhizobium sp. CCGE-LA001]
Length = 322
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 155/307 (50%), Positives = 208/307 (67%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
+E SL + + EQEL + I MI+L E D + E+ AL ++++ +EL+A
Sbjct: 2 QERTSLEDSLSGIGKVEQELEDDIGMIELGEAEGDEGVVAEAEAALKNLKKEVARRELEA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+EV AGAGGTES DWA M+L+MY WA+ G++V ++E GE AGIK
Sbjct: 62 LLSGEADRFDSYLEVHAGAGGTESQDWAQMLLRMYTRWAETHGFKVEYLEESEGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI+V G A+G+ K E GVHRLVRISPFDS RRHTSF++V V P D S + I E
Sbjct: 122 SATIQVSGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQVFPVI-DDSIKIDIKE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD+R++ RSGGAGGQH N T+SAVR+ HIPTG+ CQ RSQH+N+A A +L++R+
Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
++E+ ++ + A + TDI WG+QIR+YVL PY+MVKDLRT + SD VL GDLD
Sbjct: 241 EIELKKREEKAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLGGDLDD 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMAATLA 307
>gi|312959346|ref|ZP_07773863.1| peptide chain release factor 2 (RF-2) [Pseudomonas fluorescens WH6]
gi|311286063|gb|EFQ64627.1| peptide chain release factor 2 (RF-2) [Pseudomonas fluorescens WH6]
Length = 430
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 150/335 (44%), Positives = 221/335 (65%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++ EL P++W+ P +A + RE +L + + L + D++ +A EE+D
Sbjct: 98 RLTEVNRELEDPSVWNKPEYAQELGRERAALAQIVDTLDELNTGLADCRDLLDMAVEEDD 157
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
+ + L + + E + S E+DP + Y+++QAG+GGTE+ DWA+++L+MY
Sbjct: 158 EGAVGDVVAELARLEENLAKLEFRRMFSHEMDPNNAYLDIQAGSGGTEAQDWANILLRMY 217
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA +RG+ T+M+ GE+AGIK AT+ + GEYAFG+ + E+GVHRLVR SPFDSG R
Sbjct: 218 LRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTEIGVHRLVRKSPFDSGNR 277
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSF+AV V P D ++IN +DLRI+ +RS GAGGQH NTTDSAVRI H+PT
Sbjct: 278 RHTSFSAVFVSPEI-DDKVEIEINPADLRIDTYRSSGAGGQHVNTTDSAVRITHVPTNTV 336
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
+CQNERSQH NK +AM +L++++ + E+ ++ + + +DI WG+QIR+YVL
Sbjct: 337 VSCQNERSQHANKDTAMKMLRAKLYEQEMQKRNAASQALEDTKSDIGWGHQIRSYVLDAS 396
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRTN E SD D VL+GD+D ++ + L + L
Sbjct: 397 R-IKDLRTNIERSDCDKVLDGDIDEYLEASLKSGL 430
>gi|374301042|ref|YP_005052681.1| peptide chain release factor 2 [Desulfovibrio africanus str. Walvis
Bay]
gi|332553978|gb|EGJ51022.1| peptide chain release factor 2 [Desulfovibrio africanus str. Walvis
Bay]
Length = 368
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 151/358 (42%), Positives = 229/358 (63%), Gaps = 1/358 (0%)
Query: 84 DWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
D K+ A + S + + RL N RL + L++P WD P + +E +
Sbjct: 6 DLKARGAQLLDSYESLWGRLDHDRDNERLRQIEDALSRPGAWDKPDRLTPMLQEKRQISE 65
Query: 144 KMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDP 203
K++ + + E + + LARE+ E+ E L ++ + K+ EL +L+G D
Sbjct: 66 KLERLTVLHKTRQEVEEWLDLAREDQTQEVLAILSEQLDVLQERLKDVELREMLAGPEDQ 125
Query: 204 CSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDG 263
S +E+ +GAGGTE+ DWA M+L+MY+ W++R+GY+V+++D + GE AG K T++V+G
Sbjct: 126 NSAIMEIHSGAGGTEAQDWAEMLLRMYRRWSERQGYKVSILDFLEGEEAGFKSVTVQVEG 185
Query: 264 EYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERF 323
YA+G K E G+HRL+RISPFD+ RRHTSFA+VAV P+ G + + + E DLRI+ F
Sbjct: 186 LYAYGMLKGESGIHRLIRISPFDTSGRRHTSFASVAVYPDVG-TDIDIDVREEDLRIDVF 244
Query: 324 RSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQA 383
R+ GAGGQH N T+SAVRI H+PTG+ A CQNE+SQ +NK +A+ +L++R+ +LE+ + A
Sbjct: 245 RASGAGGQHVNKTESAVRITHLPTGVVAQCQNEKSQLRNKETALKILKARLYELELKKIA 304
Query: 384 QMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
+S I+WG+QIRTY L PYR+VKD RT E+ D ++VL G++D I ++L
Sbjct: 305 AARQAEYESKDTIAWGSQIRTYTLQPYRLVKDHRTGMEIGDVEAVLNGEIDPLIRNFL 362
>gi|407714054|ref|YP_006834619.1| hypothetical protein BUPH_06657 [Burkholderia phenoliruptrix
BR3459a]
gi|407236238|gb|AFT86437.1| hypothetical protein BUPH_06657 [Burkholderia phenoliruptrix
BR3459a]
Length = 342
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 151/343 (44%), Positives = 225/343 (65%), Gaps = 6/343 (1%)
Query: 103 LQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMI 162
+ + + RL ++ EL P++W+D HA + RE L + ++ + +L + D+
Sbjct: 2 FDYDDKSRRLIEVNRELEDPDVWNDSKHAQALGREKKLLDDTVGKLTSLHNDLRDAQDLF 61
Query: 163 KLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDW 222
++AREE D E + + ++ + E + + DP + ++++QAGAGGTE+ DW
Sbjct: 62 EMAREEGDDETLVACEADAQALEQRVADMEFRRMFANPADPNNAFLDIQAGAGGTEACDW 121
Query: 223 ASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRI 282
ASM+L+ Y + +R+G++ ++++ G++AGIK ATIK++GEYA+G+ + E GVHRLVR
Sbjct: 122 ASMLLRQYLRYCERKGFKTEVLEQTDGDVAGIKNATIKIEGEYAYGFLRTETGVHRLVRK 181
Query: 283 SPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRI 342
SPFDS RHTSF++V V P D S V IN +DLRI+ +R+ GAGGQH N TDSAVRI
Sbjct: 182 SPFDSSGGRHTSFSSVFVYPEI-DDSIEVDINPADLRIDTYRASGAGGQHINKTDSAVRI 240
Query: 343 IHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQI 402
H+P+GI CQN+RSQH+N+A AM +L+SR+ + EI ++ + TD+ WG+QI
Sbjct: 241 THMPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQAEQDKLEAGKTDVGWGHQI 300
Query: 403 RTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R+YVL R +KDLRTN E+S+ SVL+GDLD FI SASL
Sbjct: 301 RSYVLDNSR-IKDLRTNVEISNTKSVLDGDLDPFI----SASL 338
>gi|121595079|ref|YP_986975.1| peptide chain release factor 2 [Acidovorax sp. JS42]
gi|222111422|ref|YP_002553686.1| hypothetical protein Dtpsy_2248 [Acidovorax ebreus TPSY]
gi|229576664|sp|A1W9H4.1|RF2_ACISJ RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|254790913|sp|B9MBK7.1|RF2_DIAST RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|120607159|gb|ABM42899.1| bacterial peptide chain release factor 2 (bRF-2) [Acidovorax sp.
JS42]
gi|221730866|gb|ACM33686.1| conserved hypothetical protein [Acidovorax ebreus TPSY]
Length = 367
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 155/351 (44%), Positives = 228/351 (64%), Gaps = 4/351 (1%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
+ + Q +++ L + RL ++A L P +W+DP A + +E SL + ++
Sbjct: 16 LTERTQELRRYLDYDAKFERLRTVNASLEDPAVWNDPKKAQELGKEKKSLDAVVLTLQKL 75
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALL-TMRRKSKEKELDALLSGELDPCSCYIEV 210
EL ++ ++ ++++EE D E L ++EA +R +E E + S E DP +C++++
Sbjct: 76 TTELADNAELYEMSKEEGD-EAGLTTIEAEAEKLRPLIEELEFRRMFSNEADPLNCFVDI 134
Query: 211 QAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYA 270
QAGAGGTE+ DWASM+L+ Y +A+R+G++ T+ +E PG++AGIK ATIK++GEYA+G
Sbjct: 135 QAGAGGTEACDWASMLLRQYLKYAERKGFKATVEEETPGDVAGIKSATIKIEGEYAYGLL 194
Query: 271 KAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGG 330
+ E GVHRLVR SPFDS RHTSFA++ V P D S + IN SD+R + +R+ GAGG
Sbjct: 195 RTETGVHRLVRKSPFDSSGGRHTSFASLFVYPEI-DDSIEININPSDVRTDTYRASGAGG 253
Query: 331 QHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHT 390
QH N TDSAVR+ HIPTGI CQ+ RSQH N+ A L+SR+ E+ ++ + +
Sbjct: 254 QHINKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWQRLRSRLYDFEMRKRMEEQQKLE 313
Query: 391 QSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
+ TD+ WG+QIR+YVL R +KDLRTN EVS VL+GDLD FI + L
Sbjct: 314 DTKTDVGWGHQIRSYVLDNSR-IKDLRTNVEVSATQKVLDGDLDVFIEASL 363
>gi|260892371|ref|YP_003238468.1| PE-PGRS family protein [Ammonifex degensii KC4]
gi|260864512|gb|ACX51618.1| PE-PGRS family protein [Ammonifex degensii KC4]
Length = 377
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 157/359 (43%), Positives = 229/359 (63%), Gaps = 7/359 (1%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSL---MGKMKEV 148
+A+ ++ ++ L RL LL E+ P+ W D A +++E SL +G+ +
Sbjct: 12 LAERLKYLEDSLDLAQKEKRLALLEKEMEAPDFWRDLARAQAVTQEVASLRQCLGRFYRL 71
Query: 149 KAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYI 208
+ +EL +++LA EE D ++ E + + + + ++ E++ LLSG D + +
Sbjct: 72 REGHEEL---SVLLELAAEEGDAQVLAELAQDVKKLAGEIEDLEVELLLSGPYDASNAIV 128
Query: 209 EVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFG 268
+ AGAGGT++ DW +M+L+MY WA+ GYR+ +D + GE AGIK T +V G A+G
Sbjct: 129 SLHAGAGGTDAQDWVAMLLRMYARWAEAHGYRIRTLDLLTGEEAGIKSVTFEVIGPRAYG 188
Query: 269 YAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGA 328
Y KAE GVHRL+RISPFD+ RRHTSFA+V V+P D T ++I +LRI+ FR+ GA
Sbjct: 189 YLKAERGVHRLIRISPFDASGRRHTSFASVDVLPAVKDD-TEIKIAPEELRIDTFRASGA 247
Query: 329 GGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAE 388
GGQH N T++AVRI H+PTGIT TCQ+ERSQ NKA+AM +L++R+ L+I + + A
Sbjct: 248 GGQHVNKTETAVRITHLPTGITVTCQSERSQSANKAAAMEILRARLLDLKIKEREKELAA 307
Query: 389 HTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDK 447
+ +I+WGNQIRTYVLHPY +VKD RT E D +VL+GD+D FI +YL K
Sbjct: 308 LRGEVKEIAWGNQIRTYVLHPYTLVKDHRTGVERRDIQAVLDGDIDDFIRAYLKVEARK 366
>gi|91205413|ref|YP_537768.1| peptide chain release factor 2 [Rickettsia bellii RML369-C]
gi|122425715|sp|Q1RIY5.1|RF2_RICBR RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|91068957|gb|ABE04679.1| Peptide chain release factor RF-2 [Rickettsia bellii RML369-C]
Length = 368
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 157/368 (42%), Positives = 240/368 (65%), Gaps = 5/368 (1%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
+++ I QS++++++ L + RL L P+LW+D +A ++ RE +L ++
Sbjct: 6 ENYVKKIEQSLELLRRSLDVETSAARLAELEELAASPDLWNDQANAQKLLREKSNLEEQL 65
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
L + +++ ++A END E+ + + L ++ + + E + L SGE D +
Sbjct: 66 GAYNKIRSNLKDALELEEMAEAENDLEIMQQVEKDLQSLSTIAAKFETECLFSGEADSNN 125
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
C++E+ AGAGGTES DWAS++++MY +A+R G++ +++ + GE AGIK TI++ G
Sbjct: 126 CFLEINAGAGGTESHDWASIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGRR 185
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
A+G+ K E GVHRLVRISPF++ +R TSFA+ V P D + + I + DLRI+ FR+
Sbjct: 186 AYGWLKTEAGVHRLVRISPFNAAGKRMTSFASSWVYPEI-DDNIAITIEDKDLRIDTFRA 244
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQM 385
GAGGQH NTTDSAVRI HIPTG CQ++RSQH+NKA AM +LQ+++ +LE+ ++
Sbjct: 245 SGAGGQHVNTTDSAVRITHIPTGTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDS 304
Query: 386 NAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
E + TD SWG+QIR+YVL PY+MVKDLRT+YE SD VL+GDL+ F+ SASL
Sbjct: 305 VNEQNAAKTDNSWGHQIRSYVLQPYQMVKDLRTDYETSDTKGVLDGDLEEFV----SASL 360
Query: 446 DKDEGGQQ 453
+ G ++
Sbjct: 361 AMNAGSKK 368
>gi|333928926|ref|YP_004502505.1| peptide chain release factor 2 [Serratia sp. AS12]
gi|333933879|ref|YP_004507457.1| peptide chain release factor 2 [Serratia plymuthica AS9]
gi|386330749|ref|YP_006026919.1| Peptide chain release factor 2 [Serratia sp. AS13]
gi|333475486|gb|AEF47196.1| Peptide chain release factor 2 [Serratia plymuthica AS9]
gi|333492986|gb|AEF52148.1| Peptide chain release factor 2 [Serratia sp. AS12]
gi|333963082|gb|AEG29855.1| Peptide chain release factor 2 [Serratia sp. AS13]
Length = 365
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 151/360 (41%), Positives = 232/360 (64%), Gaps = 2/360 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
K+ +++ V++ L + RL ++AEL +P++W+DP A + +E +L +
Sbjct: 8 KNRIQDLSERTAVLRGYLDYDAKKERLEEVNAELEQPDVWNDPERAQALGKERAALEAIV 67
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
+ + EQ + +++LA E +D E E++ L + K ++ E + SGE D
Sbjct: 68 ETIDQLEQGGEDVTGLLELAVEADDEETFNEAVAELDQLSAKLEQLEFRRMFSGEYDSAD 127
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
CY+++QAG+GGTE+ DWASM+L+MY WA+ +G++ +++E G++AG+K ATIK+ G+Y
Sbjct: 128 CYLDIQAGSGGTEAQDWASMLLRMYLRWAESKGFKTEVIEESDGDVAGLKSATIKIIGDY 187
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
AFG+ + E GVHRLVR SPFDSG RRHTSF++V + P + IN +DLRI+ +R+
Sbjct: 188 AFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSVFIYPEVD-DDIDIDINPADLRIDVYRA 246
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQM 385
GAGGQH N T+SAVRI H+PT I CQN+RSQH+NK A L++++ + E+ ++
Sbjct: 247 SGAGGQHVNKTESAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLYEFEMQKKNAD 306
Query: 386 NAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ + +DI WG+QIR+YVL R +KDLRTN E + +VL+GDLD FI + L A L
Sbjct: 307 KQQMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTNVETRNTQAVLDGDLDKFIEASLKAGL 365
>gi|253701853|ref|YP_003023042.1| hypothetical protein GM21_3258 [Geobacter sp. M21]
gi|251776703|gb|ACT19284.1| conserved hypothetical protein [Geobacter sp. M21]
Length = 371
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 149/352 (42%), Positives = 224/352 (63%), Gaps = 4/352 (1%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
+A+ I ++ L+ + R+ L ++P+ W+D +A ++ R ++ + ++
Sbjct: 12 LAERIDKLRGSLEVDDKKERMQELEELTSRPDFWNDAENAQKVLRSRTAMEKDVTIWESL 71
Query: 152 EQELLEHIDMIKLAREEND--TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIE 209
+++ + ++I+L EE D T E+ ++ A L + E +LSG D ++
Sbjct: 72 DKQARDIQELIELGSEEQDEATLAEVAAMNAQLET--GVSQAEFRRMLSGPHDASGAFVS 129
Query: 210 VQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGY 269
+ +GAGGTES DWA M+L+MY + +++G++ + D G+ AG+K T V GE+A+GY
Sbjct: 130 INSGAGGTESQDWAEMLLRMYLRYCEKKGWKTEITDYQEGDGAGVKGVTFAVTGEFAYGY 189
Query: 270 AKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAG 329
KAE G+HRLVRISPFDS RRHTSFA+ V P + ++I ESDLRI+ +RS GAG
Sbjct: 190 LKAEAGIHRLVRISPFDSSARRHTSFASAFVFPVIEEDDIEIKIAESDLRIDTYRSSGAG 249
Query: 330 GQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEH 389
GQH NTTDSA+RI HIPTG CQ+ERSQH NKA+AM VL+S++ ++E+ + ++
Sbjct: 250 GQHVNTTDSAIRITHIPTGTVVACQSERSQHMNKATAMKVLRSKLYEMELREREAKASDI 309
Query: 390 TQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
+I WG+QIR+YVLHPY+MVKDLRT E PD+VL+G LD F++ YL
Sbjct: 310 AGEKKEIGWGSQIRSYVLHPYKMVKDLRTGVESGKPDAVLDGALDDFVVPYL 361
>gi|348027317|ref|YP_004767122.1| peptide chain release factor 2 [Megasphaera elsdenii DSM 20460]
gi|341823371|emb|CCC74295.1| peptide chain release factor 2 [Megasphaera elsdenii DSM 20460]
Length = 337
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 153/339 (45%), Positives = 218/339 (64%), Gaps = 7/339 (2%)
Query: 118 ELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDM---IKLAREENDTELE 174
+++ P W+DP A +IS+E L EV+ E+ + + D+ +++A E+ D
Sbjct: 2 QMSDPAFWNDPDKAKKISQEATLLK---TEVEGHEELVRKADDLSEYLEMAMEDGDASFA 58
Query: 175 LESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWA 234
+ + + + +++E+ LLSGE D C+ I AGAGGTE+ DWA M+++MY WA
Sbjct: 59 EDIEKQYHDLLKDIEKREVRLLLSGEYDKCNALITFHAGAGGTEAQDWAQMLIRMYTRWA 118
Query: 235 QRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTS 294
+R GY++T++D PG+ AGIK A +V+GEYA+GY K+E GVHRLVRISPFD+ RRHTS
Sbjct: 119 ERNGYKLTILDMQPGDEAGIKSAAFRVEGEYAYGYLKSEKGVHRLVRISPFDAAARRHTS 178
Query: 295 FAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQ 354
F AV V+P D V+IN D+R++ FR+ GAGGQH N T SAVR+ H+PTGI CQ
Sbjct: 179 FTAVDVMPELPD-DVDVEINMDDVRVDYFRASGAGGQHVNKTSSAVRMTHMPTGIVVQCQ 237
Query: 355 NERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVK 414
NERSQ QNK + L++++ +LE +Q ++ AE I WG+QIR+YV HPY +VK
Sbjct: 238 NERSQLQNKEMCLKYLRAKLFELEQEKQEKLKAEIGGVHQAIEWGSQIRSYVFHPYNLVK 297
Query: 415 DLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKDEGGQQ 453
D RTN E + +V++GDLD FI YL +K Q+
Sbjct: 298 DHRTNVETGNIQAVMDGDLDIFIEGYLQQEKEKKLAKQE 336
>gi|114704660|ref|ZP_01437568.1| peptide chain release factor 2 protein [Fulvimarina pelagi
HTCC2506]
gi|114539445|gb|EAU42565.1| peptide chain release factor 2 protein [Fulvimarina pelagi
HTCC2506]
Length = 321
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 146/307 (47%), Positives = 210/307 (68%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + ++ E + E++++I + EE D E+ E+ L T++ + +++++
Sbjct: 2 RERQHLETNITAIRELESAVEENVELIAMGEEEGDGEIVSEAEATLKTLQTDAAKRQIET 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+EV +GAGGTES DWASM+ +MY WA+R ++V +++E GE AGIK
Sbjct: 62 LLSGEADSNDTYMEVHSGAGGTESQDWASMLQRMYIRWAERANFKVEVLEEQGGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
T+ + G A+G+AK E GVHRLVRISP+DS RRHTSFA+V V P D + +++NE
Sbjct: 122 STTLLIKGHNAYGWAKTESGVHRLVRISPYDSQARRHTSFASVWVYPVV-DDTIDIEVNE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD+RI+ +R+ GAGGQH NTTDSAVRI HI TGI CQ ERSQH+N+A+A +L++R+
Sbjct: 181 SDVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVACQQERSQHKNRATAWNMLKARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ ++ S TDI WG+QIR+YVL PY++VKDLRT E + P VL+G+LD
Sbjct: 241 EAELEKREAEANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGIESTSPQDVLDGELDE 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMEAALA 307
>gi|421566459|ref|ZP_16012208.1| peptide chain release factor 2 [Neisseria meningitidis NM3081]
gi|402339981|gb|EJU75186.1| peptide chain release factor 2 [Neisseria meningitidis NM3081]
Length = 367
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 148/320 (46%), Positives = 214/320 (66%), Gaps = 2/320 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
P LW+DP A I +E L G + + + ++ +I++ EEND E E +
Sbjct: 46 PELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLIEMTVEENDEEGFAAVQEDV 105
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
+ ++ + E + + DP +C+I++ AGAGGTE+ DWA M+ +MY +A+R+G+++
Sbjct: 106 AGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDWAGMLFRMYSRYAERKGFKI 165
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
+++E GEIAGI RATI+V+GEYA+G + E GVHRLVR SPFDS +RHTSFA+V V
Sbjct: 166 EILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRYSPFDSNNKRHTSFASVFVY 225
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D ++IN +DLRI+ +R+ GAGGQH N TDSAVRI H PTGI CQN+RSQH
Sbjct: 226 PEI-DDFIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGIVVQCQNDRSQHA 284
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
NKA+AM +L+S++ +LE+ ++ + + +D+ WG+QIR+YVL R +KDLRT YE
Sbjct: 285 NKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIRSYVLDSSR-IKDLRTGYE 343
Query: 422 VSDPDSVLEGDLDGFILSYL 441
V + +VL+GDLDGFI + L
Sbjct: 344 VGNTKAVLDGDLDGFIEASL 363
>gi|229916623|ref|YP_002885269.1| peptide chain release factor 2 [Exiguobacterium sp. AT1b]
gi|259585245|sp|C4L5K9.1|RF2_EXISA RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|229468052|gb|ACQ69824.1| peptide chain release factor 2 [Exiguobacterium sp. AT1b]
Length = 366
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 150/358 (41%), Positives = 228/358 (63%), Gaps = 1/358 (0%)
Query: 84 DWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
D ++ A+A+ ++ + L R+ L E+ P+ WD+ A ++ E L
Sbjct: 5 DIRNELEAMAKRLENYRASLNLTEKEARIAELENEMTYPDFWDNQEKAQKVIDESNGLKA 64
Query: 144 KMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDP 203
+ + + + + ++L +EE D E++ E E++ ++++ + EL+ LL+G D
Sbjct: 65 MVDKYQDLANQHEDGEVTLELIKEEPDAEMQEELGESIQALKKEFDDFELEILLNGPYDA 124
Query: 204 CSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDG 263
+ +E+ GAGGTES DWASM+L+MY+ +A ++G++V +D +PGE AG+K T+++ G
Sbjct: 125 NNAILELHPGAGGTESQDWASMLLRMYQRFADKQGWKVETVDYLPGEEAGVKSVTLRIVG 184
Query: 264 EYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERF 323
A+GY KAE G+HRLVRISPFDS RRHTSF + V+P D +++ DLRI+ +
Sbjct: 185 HNAYGYLKAEKGIHRLVRISPFDSSGRRHTSFVSCDVMPEF-DDDIEIEVRTEDLRIDTY 243
Query: 324 RSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQA 383
R+ GAGGQH NTTDSAVRI H+PTG+ +CQ ERSQ +N+ SAM +L++++ Q E+ Q
Sbjct: 244 RASGAGGQHINTTDSAVRITHVPTGVVVSCQTERSQIKNRESAMKMLKAKLYQRELDEQQ 303
Query: 384 QMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
+ E TDI WG+QIR+YV HPY MVKD RTNYEV + V++GD+ FI +YL
Sbjct: 304 RKLDEIRGEKTDIGWGSQIRSYVFHPYSMVKDHRTNYEVGNTSGVMDGDVMPFIDAYL 361
>gi|15803427|ref|NP_289460.1| peptide chain release factor 2 [Escherichia coli O157:H7 str.
EDL933]
gi|12517417|gb|AAG58019.1|AE005519_5 peptide chain release factor RF-2 [Escherichia coli O157:H7 str.
EDL933]
Length = 365
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 151/348 (43%), Positives = 224/348 (64%), Gaps = 2/348 (0%)
Query: 98 VIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLE 157
V++ L + RL ++AEL +P++W++P A + +E SL + + +Q L +
Sbjct: 20 VLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLED 79
Query: 158 HIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGT 217
+++LA E +D E E++ L + K + E + SGE D CY+++QAG+GGT
Sbjct: 80 VSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGT 139
Query: 218 ESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVH 277
E+ DWASM+ +MY WA+ RG++ +++E GE+AGIK TIK+ G+YA+G+ + E GVH
Sbjct: 140 EAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVH 199
Query: 278 RLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTD 337
RLVR SPFDSG RRHTS ++ V P D ++IN +DLRI+ +R+ GAGGQH N T+
Sbjct: 200 RLVRKSPFDSGGRRHTSXSSAFVYPEV-DDDIDIEINPADLRIDVYRASGAGGQHVNRTE 258
Query: 338 SAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDIS 397
SAVRI HIPTGI CQN+RSQH+NK AM +++++ +LE+ ++ + +DI
Sbjct: 259 SAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIG 318
Query: 398 WGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
WG+QIR+YVL R +KDLRT E + +VL+G LD FI + L A L
Sbjct: 319 WGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL 365
>gi|222150753|ref|YP_002559906.1| peptide chain release factor RF-2 [Macrococcus caseolyticus
JCSC5402]
gi|222119875|dbj|BAH17210.1| peptide chain release factor RF-2 [Macrococcus caseolyticus
JCSC5402]
Length = 350
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 146/324 (45%), Positives = 212/324 (65%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
P+ W+D A I ++ +L ++E E+ L + ++ +EE+D + E +E L
Sbjct: 27 PDFWNDGDKAQDIINKNNALKSVVQEFSTLEEGLENSEVLFEMYKEESDEDTHQELIEQL 86
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
T+++ + + EL LLSGE D + +E+ GAGGTES DW M+L+MY+ +A ++G++V
Sbjct: 87 NTLQQIANDFELKMLLSGEFDANNAILELHPGAGGTESQDWGEMLLRMYQRFADKKGFKV 146
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
+D +PG+ AGIK T+ + G A+GY KAE GVHRLVRISPFDS RRHTSF + V
Sbjct: 147 ETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCEVT 206
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P + + ++IN D++I+ +R+ GAGGQH NTTDSAVRI H PTGI TCQNERSQ +
Sbjct: 207 PEFDNDNIEIEINSEDIKIDTYRASGAGGQHVNTTDSAVRITHQPTGIVVTCQNERSQIK 266
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
N+ AM +L++++ Q +I Q A +I WG+QIR+YV HPY MVKD RTN E
Sbjct: 267 NREQAMKMLKAKLYQKKIEEQEAELAAIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTNVE 326
Query: 422 VSDPDSVLEGDLDGFILSYLSASL 445
+ ++V++GD+D FI +YL + L
Sbjct: 327 TGNTNAVMDGDIDLFIDAYLKSQL 350
>gi|337744478|ref|YP_004638640.1| protein PrfB [Paenibacillus mucilaginosus KNP414]
gi|379718117|ref|YP_005310248.1| protein PrfB [Paenibacillus mucilaginosus 3016]
gi|386720677|ref|YP_006187002.1| protein PrfB [Paenibacillus mucilaginosus K02]
gi|336295667|gb|AEI38770.1| PrfB [Paenibacillus mucilaginosus KNP414]
gi|378566789|gb|AFC27099.1| PrfB [Paenibacillus mucilaginosus 3016]
gi|384087801|gb|AFH59237.1| protein PrfB [Paenibacillus mucilaginosus K02]
Length = 333
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 146/329 (44%), Positives = 216/329 (65%), Gaps = 1/329 (0%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
++ P+ WDD A ++ E ++ G + +++A E + M++L +EEND L E
Sbjct: 1 MSAPDFWDDNEKAQKLIAEMNAIKGSIDQLQALTAEYEDLELMMELVQEENDESLASELT 60
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
+ + +K + EL LLS D + +E+ GAGGTES DWA M+L+MY+ WA++RG
Sbjct: 61 SGITALVKKLEGFELQLLLSQPYDKLNAILELHPGAGGTESQDWAEMLLRMYRRWAEKRG 120
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
++V ++D +PG+ AG+K T+ + G A+GY KAE GVHRLVRISPFDS RRHTSF +
Sbjct: 121 FKVEVLDYLPGDEAGVKSVTLLIQGYNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
++P D ++I DL+++ +R+ GAGGQH NTTDSAVRI H+PTG+ +CQ ERS
Sbjct: 181 DIMPEI-DDDVEIEIRTEDLKVDTYRASGAGGQHINTTDSAVRITHMPTGVVVSCQTERS 239
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
Q +N+ AM +L+S++ + +I Q + AE + DI+WG+QIR+YV HPY MVKD RT
Sbjct: 240 QIKNRDRAMKMLRSKLYEKKIEEQQKQLAEIRGEVADIAWGSQIRSYVFHPYSMVKDHRT 299
Query: 419 NYEVSDPDSVLEGDLDGFILSYLSASLDK 447
E + +V++GDLD FI +YL ++K
Sbjct: 300 GEETGNVGAVMDGDLDPFIDAYLRGRINK 328
>gi|300718200|ref|YP_003743003.1| peptide chain release factor 2 [Erwinia billingiae Eb661]
gi|299064036|emb|CAX61156.1| Peptide chain release factor 2 [Erwinia billingiae Eb661]
Length = 348
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 154/339 (45%), Positives = 225/339 (66%), Gaps = 10/339 (2%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++AEL +P++W++P A + +E SL + + EQ L + +++LA E +D
Sbjct: 16 RLEEVNAELEQPDVWNEPDRAQALGKERSSLEAIVDTLDQMEQGLEDVRGLLELAVEADD 75
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
E E++ L + +K E E + SGE D CYI++QAG+GGTE+ DWA M+++MY
Sbjct: 76 EETFNETIAELDVLEKKLGELEFRRMFSGEYDSADCYIDIQAGSGGTEAQDWAGMLVRMY 135
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA+ +G++ +++E GE+AG K AT+++ G+YAFG+ + E GVHRLVR SPFDSG R
Sbjct: 136 LRWAEAKGFKTEIIEESEGEVAGTKSATLRIIGDYAFGWLRTETGVHRLVRKSPFDSGGR 195
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSF++ V P D ++IN +DLRI+ +R+ GAGGQH N T+SAVRI H+PT
Sbjct: 196 RHTSFSSAFVYPEV-DDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRITHLPTNTV 254
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSL----TDISWGNQIRTYV 406
CQN+RSQH+NK AM +++++ +LE+ ++ NAE QSL +DI WG+QIR+YV
Sbjct: 255 TQCQNDRSQHKNKDQAMKQMKAKLYELEMQKK---NAEK-QSLEDNKSDIGWGSQIRSYV 310
Query: 407 LHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
L R +KDLRT E + +VL+GDLD FI + L A L
Sbjct: 311 LDDSR-IKDLRTGVETRNTQAVLDGDLDRFIEASLKAGL 348
>gi|190891331|ref|YP_001977873.1| peptide chain release factor 2 [Rhizobium etli CIAT 652]
gi|190696610|gb|ACE90695.1| peptide chain release factor 2 (rf-2) protein [Rhizobium etli CIAT
652]
Length = 342
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 157/321 (48%), Positives = 225/321 (70%), Gaps = 1/321 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
PNLW+D A ++ RE L + V+ EQ+L +++++I+L EE D + E+ +AL
Sbjct: 8 PNLWNDAAEAQKLMRERQQLDDGINGVRQLEQQLKDNVELIELGEEEGDGGVVKEAEDAL 67
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
++ ++ ++++A+LSGE D Y+EV +GAGGTES DWA+M+L+MY WA+R+ ++V
Sbjct: 68 KALKAEAARRQVEAMLSGEADGNDTYLEVHSGAGGTESQDWANMLLRMYTRWAERQRFKV 127
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
L++ GE AGIK AT+ V G A+G+ K E GVHRLVRISP+DS RRHTSF+++ V
Sbjct: 128 ELLEVHDGEEAGIKSATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFSSIWVY 187
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D S +++INESD RI+ +RS GAGGQH NTTDSAVRI HIPTGI CQ ERSQH+
Sbjct: 188 P-VVDDSINIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVACQQERSQHK 246
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
N+A A +L++R+ + E+ ++ + S TDI WG+QIR+YVL PY++VKDLRT
Sbjct: 247 NRAKAWEMLRARMYEAELKKREEAANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVA 306
Query: 422 VSDPDSVLEGDLDGFILSYLS 442
+ PD VL+GDL+ F+ + L+
Sbjct: 307 STAPDDVLDGDLNEFMEAALA 327
>gi|83858490|ref|ZP_00952012.1| peptide chain release factor 2 [Oceanicaulis sp. HTCC2633]
gi|83853313|gb|EAP91165.1| peptide chain release factor 2 [Oceanicaulis sp. HTCC2633]
Length = 316
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 148/314 (47%), Positives = 212/314 (67%), Gaps = 1/314 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L M EV+ +L + +++ ++A E D +L ++ EAL +R ++ + EL A
Sbjct: 2 RERNRLDQSMTEVQEIVADLADTLELAEMAEMEGDDDLYQDATEALKALRARAGKAELQA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+E+ GAGGTE+ DWASM+ +MY WA++ G++V +++ GE AG+K
Sbjct: 62 LLSGEADGNDSYLEIHPGAGGTEAQDWASMLARMYTRWAEKSGFKVEVIEAQAGEEAGLK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
TI V GE A+G+ K E GVHRLVRISP+DS RRHTSFA+V P D + ++I +
Sbjct: 122 SITILVKGENAYGWLKTEAGVHRLVRISPYDSSGRRHTSFASVWTYPLV-DDTIEIEIED 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
D+R++ +R+ GAGGQH N TDSAVR+ H PTGI CQ +RSQH+N+A+A +L++R+
Sbjct: 181 KDVRVDTYRASGAGGQHINKTDSAVRLTHEPTGIVVACQTDRSQHKNRANAWTMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+LE+ ++ + +S TDI WG+QIR+YVL PY+MVKDLRT E SD VL+GDLD
Sbjct: 241 ELELQKREEAAQADAESKTDIGWGHQIRSYVLQPYQMVKDLRTQVETSDTQGVLDGDLDD 300
Query: 436 FILSYLSASLDKDE 449
F+ + L+ + K E
Sbjct: 301 FMAAALAQRVGKTE 314
>gi|397690960|ref|YP_006528214.1| peptide chain release factor 2 [Melioribacter roseus P3M]
gi|395812452|gb|AFN75201.1| peptide chain release factor 2 [Melioribacter roseus P3M]
Length = 329
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 151/324 (46%), Positives = 218/324 (67%), Gaps = 9/324 (2%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKM---KEVKAFEQELLEHID-MIKLAREENDTELELES 177
P+ W D A + ++ SL + E+K E ++HI+ ++L + E D E
Sbjct: 5 PDFWSDQKRAQSLLQKSKSLQNWVDLWNELK----EKVDHIEEFVELVKAEEDESFITEI 60
Query: 178 LEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRR 237
+ L + E EL ++LSG+ D +C + + +GAGGTE+ DW+ M+++MY W ++
Sbjct: 61 DKELTEAEKLYSELELKSMLSGKDDDKNCILTIHSGAGGTEAQDWSEMLMRMYMRWGEQN 120
Query: 238 GYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAA 297
GY+++++D + G+ AGIK ATI+V+G YA+GY KAE GVHRLVRISPFD+ KRRHTSFA+
Sbjct: 121 GYKMSIIDYLEGDGAGIKSATIEVEGLYAYGYLKAETGVHRLVRISPFDANKRRHTSFAS 180
Query: 298 VAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNER 357
V VIP D S ++IN +DLRI+ +RSGG GGQ+ N ++AVRI HIPTG+ A CQ+ER
Sbjct: 181 VFVIPEV-DDSIDIEINPADLRIDTYRSGGKGGQNVNKVETAVRITHIPTGVVAACQSER 239
Query: 358 SQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLR 417
SQ QNK +AM +L+S++ QLE+ +Q E ++ I WG+QIR+YV HPY +VKD R
Sbjct: 240 SQLQNKTNAMKLLKSKLYQLELEKQQAELNEIEKNKMKIEWGSQIRSYVFHPYNLVKDHR 299
Query: 418 TNYEVSDPDSVLEGDLDGFILSYL 441
T YE SD SV++G+++ FI YL
Sbjct: 300 TGYETSDTQSVMDGNINEFIKQYL 323
>gi|330447415|ref|ZP_08311064.1| peptide chain release factor 2 [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328491606|dbj|GAA05561.1| peptide chain release factor 2 [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 347
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 150/335 (44%), Positives = 220/335 (65%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++AEL +P++W++P A + +E SL ++ + +Q + + +++LA EE D
Sbjct: 15 RLEEVNAELEQPDVWNEPERAQALGKERASLEAVVETIDQLDQGVEDVEGLLELAVEEED 74
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
E E L + K + E + +G+ DP CY+++QAG+GGTE+ DW SM+L+MY
Sbjct: 75 QETFDEIEPELAELEEKLAKLEFRRMFAGDHDPSDCYVDLQAGSGGTEAQDWTSMMLRMY 134
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA +G++ +++ G++AG+K ATI+V GEYA+G+ + E GVHRLVR SPFDSG R
Sbjct: 135 LRWADAKGFKTEVIEVSEGDVAGLKSATIRVSGEYAYGWLRTETGVHRLVRKSPFDSGGR 194
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSFA+ V P D + + IN SDLRI+ +R+ GAGGQH NTT+SAVRI H+PT I
Sbjct: 195 RHTSFASAFVYPEI-DDNIAIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHLPTNIV 253
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+NK AM L++++ + E+ +Q + S +DI WG+QIR+YVL
Sbjct: 254 VQCQNDRSQHKNKDQAMKQLKAKLFEFELQKQNAEKQANEDSKSDIGWGSQIRSYVLDDS 313
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E + +VL+GDLD FI + L + L
Sbjct: 314 R-IKDLRTGVENRNTQAVLDGDLDRFIEASLKSGL 347
>gi|386739917|ref|YP_006213097.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis 31]
gi|384476611|gb|AFH90407.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis 31]
Length = 366
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 161/347 (46%), Positives = 228/347 (65%), Gaps = 12/347 (3%)
Query: 95 SIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQE 154
++ I+K + + L R+ L + + P LWD+P HA +++ E S+ ++K++ + Q
Sbjct: 15 TLTTIEKVMDPEELASRVRELEQQASDPTLWDNPDHAQKVTTELSSVQAQLKKLTSLRQR 74
Query: 155 LLEHIDMIKLAREEND-TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAG 213
+ + M +LA EE D TEL E L L + + + E+ +LSGE D I +++G
Sbjct: 75 IDDMPVMYELAEEEGDGTELADEELAELTS---EIESLEVKTMLSGEYDAREAVINIRSG 131
Query: 214 AGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAE 273
AGG ++ DWA M+++MY WA++ +V + D E AGIK AT V GEY +G E
Sbjct: 132 AGGVDAADWAEMLMRMYVRWAEKNDRKVDIYDISYAEEAGIKSATFVVHGEYMYGQLSVE 191
Query: 274 VGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHA 333
G HRLVRISPFD+ RR TSFA + V+P + + H+ I +S++R++ +RS G GGQ
Sbjct: 192 QGAHRLVRISPFDNQGRRQTSFAEIEVLPVV-EQTDHIDIPDSEVRVDVYRSSGPGGQSV 250
Query: 334 NTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ---AQMNAEHT 390
NTTDSAVR+ HIPTGI TCQNE+SQ QNKASAM VLQ+++ LE RQ A+++A
Sbjct: 251 NTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKL--LEKKRQEERAELDA--L 306
Query: 391 QSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
+ + SWGNQ+R+YVLHPY+MVKDLRTNYEV+DP VL+GDLDGF+
Sbjct: 307 GAGGNASWGNQMRSYVLHPYQMVKDLRTNYEVNDPQKVLDGDLDGFL 353
>gi|304322131|ref|YP_003855774.1| hypothetical protein PB2503_12974 [Parvularcula bermudensis
HTCC2503]
gi|303301033|gb|ADM10632.1| hypothetical protein PB2503_12974 [Parvularcula bermudensis
HTCC2503]
Length = 315
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 149/307 (48%), Positives = 213/307 (69%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
+E L ++ + A + EL +++++ ++A E D + AL ++ ++ EL+A
Sbjct: 2 QERTHLENQIAALTAMQTELDDNLELAEMAEAEGDDAAVDDIQAALADLKDRAGRAELEA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D + ++E+ AGAGGTES DWA+M+ +MY WAQ+ G++V +++E GE AGIK
Sbjct: 62 LLSGEADANNAFVEIHAGAGGTESNDWANMLYRMYVRWAQQHGHKVDIIEEQGGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI V G A+G+ K E GVHRLVRISP+DS RRHTSF++V V P D + +++ E
Sbjct: 122 SATILVKGINAYGWLKVESGVHRLVRISPYDSNARRHTSFSSVWVYPEI-DDNIEIEVAE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD R++ FR+ GAGGQH NTTDSAVRI H PTGI CQ+ERSQH+N+A+A +L++R+
Sbjct: 181 SDCRVDTFRASGAGGQHVNTTDSAVRITHEPTGIVVQCQSERSQHKNRATAWNMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
++E+ R+ + S TDI WG+QIR+YVL PY+MVKDLRT E PD+VL+GDLD
Sbjct: 241 EMELQRREEEANAQAASKTDIGWGHQIRSYVLQPYQMVKDLRTGVESPSPDAVLDGDLDA 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMGAALA 307
>gi|149183327|ref|ZP_01861766.1| peptide chain release factor 2 [Bacillus sp. SG-1]
gi|148848954|gb|EDL63165.1| peptide chain release factor 2 [Bacillus sp. SG-1]
Length = 327
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 151/327 (46%), Positives = 216/327 (66%), Gaps = 3/327 (0%)
Query: 121 KPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDM-IKLAREENDTELELESLE 179
+P+ W+D A + E L + E K QE+ E++++ ++L +EEND EL+ E +E
Sbjct: 3 QPDFWNDQQQAQGVINEANGLKELVNEYKDM-QEMQENLEVTLELVKEENDAELQEELVE 61
Query: 180 ALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGY 239
+ ++ E EL LLS D + +E+ GAGGTES DW SM+L+MY+ WA+++G+
Sbjct: 62 ETKDLNKRLNEYELQLLLSEPHDKNNAILELHPGAGGTESQDWGSMLLRMYQRWAEKKGF 121
Query: 240 RVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVA 299
+V +D +PG+ AGIK T+ + G A+GY KAE GVHRLVRISPFDS RRHTSF +
Sbjct: 122 KVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCE 181
Query: 300 VIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQ 359
V+P + + I DL+I+ +R+ GAGGQH NTTDSAVRI H PTG+ TCQ+ERSQ
Sbjct: 182 VMPEFNE-EIEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHQPTGVVVTCQSERSQ 240
Query: 360 HQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTN 419
+N+ AM +L++++ Q I Q Q AE DI WG+QIR+YV HPY MVKD RTN
Sbjct: 241 IKNREQAMKMLKAKLYQKRIEEQEQELAEIRGEQKDIGWGSQIRSYVFHPYSMVKDHRTN 300
Query: 420 YEVSDPDSVLEGDLDGFILSYLSASLD 446
E+ + +V++GD++GFI +YL + ++
Sbjct: 301 TEMGNVQAVMDGDINGFINAYLRSRIN 327
>gi|293449213|ref|ZP_06663634.1| peptide chain release factor 2 [Escherichia coli B088]
gi|332280425|ref|ZP_08392838.1| peptide chain release factor RF-2 [Shigella sp. D9]
gi|291322303|gb|EFE61732.1| peptide chain release factor 2 [Escherichia coli B088]
gi|332102777|gb|EGJ06123.1| peptide chain release factor RF-2 [Shigella sp. D9]
Length = 332
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 148/331 (44%), Positives = 218/331 (65%), Gaps = 2/331 (0%)
Query: 115 LSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELE 174
++AEL +P++W++P A + +E SL + + +Q L + +++LA E +D E
Sbjct: 4 VNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSGLLELAVEADDEETF 63
Query: 175 LESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWA 234
E++ L + K + E + SGE D CY+++QAG+GGTE+ DWASM+ +MY WA
Sbjct: 64 NEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLERMYLRWA 123
Query: 235 QRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTS 294
+ RG++ +++E GE+AGIK TIK+ G+YA+G+ + E GVHRLVR SPFDSG RRHTS
Sbjct: 124 ESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTS 183
Query: 295 FAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQ 354
F++ V P D ++IN +DLRI+ +R+ GAGGQH N T+SAVRI HIPTGI CQ
Sbjct: 184 FSSAFVYPEV-DDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTGIVTQCQ 242
Query: 355 NERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVK 414
N+RSQH+NK AM +++++ +LE+ ++ + +DI WG+QIR+YVL R +K
Sbjct: 243 NDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQIRSYVLDDSR-IK 301
Query: 415 DLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
DLRT E + +VL+G LD FI + L A L
Sbjct: 302 DLRTGVETRNTQAVLDGSLDQFIEASLKAGL 332
>gi|292900474|ref|YP_003539843.1| peptide chain release factor 2 [Erwinia amylovora ATCC 49946]
gi|291200322|emb|CBJ47450.1| peptide chain release factor 2 [Erwinia amylovora ATCC 49946]
Length = 365
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 150/348 (43%), Positives = 227/348 (65%), Gaps = 2/348 (0%)
Query: 98 VIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLE 157
V++ L + RL ++AEL +P++W++P A + +E +L ++ + Q L +
Sbjct: 20 VLRGYLDYDAKKERLQEVNAELEQPDVWNEPDRAQALGKERSALEAVVETLDQMTQGLED 79
Query: 158 HIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGT 217
+++LA E D + E++ L + +K E E + SGE D CY+++QAG+GGT
Sbjct: 80 VSGLLELAVEAEDEDTFNEAVAELDGLDKKLGELEFRRMFSGEYDSADCYMDIQAGSGGT 139
Query: 218 ESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVH 277
E+ DWASM+L+MY WA+ +G++ +++E GE+AG K ATIK+ G+YAFG+ + E GVH
Sbjct: 140 EAQDWASMLLRMYLRWAEAKGFKTEIIEESDGEVAGTKSATIKIIGDYAFGWLRTETGVH 199
Query: 278 RLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTD 337
RLVR SPFDSG RRHTSF++V + P D + ++IN +DLRI+ +R+ GAGGQH N T+
Sbjct: 200 RLVRKSPFDSGGRRHTSFSSVFIYPEV-DDNIDIEINPADLRIDVYRASGAGGQHVNKTE 258
Query: 338 SAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDIS 397
SAVRI H+PT I CQN+RSQH+NK A L++++ + E+ ++ + +DI
Sbjct: 259 SAVRITHLPTNIVVQCQNDRSQHKNKDQAFKQLRAKLYEYEMQKKNADKQTAEDNKSDIG 318
Query: 398 WGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
WG+QIR+YVL R +KDLRT+ E + +VL+GDLD FI + L A L
Sbjct: 319 WGSQIRSYVLDDSR-IKDLRTSVETRNTQAVLDGDLDRFIEASLKAGL 365
>gi|345300712|ref|YP_004830070.1| peptide chain release factor 2 [Enterobacter asburiae LF7a]
gi|345094649|gb|AEN66285.1| peptide chain release factor 2 [Enterobacter asburiae LF7a]
Length = 365
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 151/360 (41%), Positives = 228/360 (63%), Gaps = 2/360 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
K+ + + V++ L + RL ++AEL +P++W++P A + +E SL +
Sbjct: 8 KNRIQDLTERSDVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIV 67
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
+ Q L + +++LA E +D E E++ L + K + E + SGE D
Sbjct: 68 DTLDQMAQGLEDVSGLLELAVEADDEETFNEAVAELDVLEEKLAQLEFRRMFSGEYDSAD 127
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
CY+++QAG+GGTE+ DWASM+ +MY WA+ RG++ +++E GE+AG+K TIK+ G+Y
Sbjct: 128 CYLDIQAGSGGTEAQDWASMLTRMYLRWAEARGFKTEIIEESEGEVAGLKSVTIKIIGDY 187
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
A+G+ + E GVHRLVR SPFDSG RRHTSF++ V P D ++IN +DLRI+ +R+
Sbjct: 188 AYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVKD-DIDIEINPADLRIDVYRA 246
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQM 385
GAGGQH N T+SAVRI HIPTG+ CQN+RSQH+NK AM +++++ +LE+ ++
Sbjct: 247 SGAGGQHVNRTESAVRITHIPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAE 306
Query: 386 NAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ +DI WG+QIR+YVL R +KDLRT E + +VL+G LD FI + L A L
Sbjct: 307 KQAMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL 365
>gi|887841|gb|AAA83072.1| peptide chain release factor 2 (RF-2) [Escherichia coli]
Length = 365
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 150/348 (43%), Positives = 223/348 (64%), Gaps = 2/348 (0%)
Query: 98 VIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLE 157
V++ L + RL ++AEL +P++W++P A + +E SL + + +Q L +
Sbjct: 20 VLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLED 79
Query: 158 HIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGT 217
+++LA E +D E E++ L + K + E + SGE D CY+++QAG+GGT
Sbjct: 80 VSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGT 139
Query: 218 ESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVH 277
E+ DWASM+ +MY WA+ RG++ +++E GE+AGIK TIK+ G+YA+G+ + E GVH
Sbjct: 140 EAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVH 199
Query: 278 RLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTD 337
R VR SPFDSG RRHTSF++ V P D ++IN +DLRI+ +R+ GAGGQH N T+
Sbjct: 200 RXVRKSPFDSGGRRHTSFSSAFVYPEV-DDDIDIEINPADLRIDVYRTSGAGGQHVNRTE 258
Query: 338 SAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDIS 397
SAVRI HIPTGI CQN+RSQH+NK M +++++ +LE+ ++ + +DI
Sbjct: 259 SAVRITHIPTGIVTQCQNDRSQHKNKDQXMKQMKAKLYELEMQKKNAEKQAMEDNKSDIG 318
Query: 398 WGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
WG+QIR+YVL R +KDLRT E + +VL+G LD FI + L A L
Sbjct: 319 WGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL 365
>gi|68535523|ref|YP_250228.1| peptide chain release factor 2 [Corynebacterium jeikeium K411]
gi|260579727|ref|ZP_05847586.1| peptide chain release factor 2 [Corynebacterium jeikeium ATCC
43734]
gi|68263122|emb|CAI36610.1| peptide chain release factor RF-2 [Corynebacterium jeikeium K411]
gi|258602157|gb|EEW15475.1| peptide chain release factor 2 [Corynebacterium jeikeium ATCC
43734]
Length = 377
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 162/352 (46%), Positives = 226/352 (64%), Gaps = 14/352 (3%)
Query: 95 SIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQE 154
++ I+K L L R L + P+LWDDP HA +++ E + K+K+VK Q
Sbjct: 15 TLTTIEKVLDLDELGDRARELEEKSADPSLWDDPDHAQQVTSELSRVQSKLKKVKGLRQR 74
Query: 155 LLEHIDMIKLAREE--NDTELELESLEALLTMRRKSKEK----ELDALLSGELDPCSCYI 208
L + + +A EE +D + E+++ T R + +++ E+ +LSGE D +
Sbjct: 75 LDDLPVLYDMAEEEAGDDPDAAQEAVQLADTEREELRQEIESLEVTTMLSGEYDEREAVL 134
Query: 209 EVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFG 268
+++ AGG ++ DWA M+L+MY WA++ G++V + D E AGIK ATI + GEY +G
Sbjct: 135 NIRSAAGGVDAADWAEMLLRMYTRWAEKAGHKVEVYDISYAEEAGIKSATIVIHGEYMYG 194
Query: 269 YAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGA 328
E G HRLVRISPFD+ RR TSFA V V+P + + H+ I+E+D+R++ +RS G
Sbjct: 195 TLSVEQGTHRLVRISPFDNQGRRQTSFAEVEVLPVV-EQTDHIDIDENDVRVDVYRSSGP 253
Query: 329 GGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIAR---QAQM 385
GGQ NTTDSAVR+ H+PTGI TCQNE+SQ QNKASAM VLQ+++ LE R QA+M
Sbjct: 254 GGQSVNTTDSAVRLTHVPTGIVVTCQNEKSQIQNKASAMRVLQAKL--LERKRQEEQAEM 311
Query: 386 NAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
+A SWGNQ+R YVLHPY+MVKDLRTN EV+DP VL+GDLDGF+
Sbjct: 312 DALKGDGSN--SWGNQMRNYVLHPYQMVKDLRTNVEVNDPSKVLDGDLDGFL 361
>gi|217077931|ref|YP_002335649.1| peptide chain release factor 2 [Thermosipho africanus TCF52B]
gi|419760522|ref|ZP_14286797.1| peptide chain release factor 2 [Thermosipho africanus H17ap60334]
gi|226739131|sp|B7IE81.1|RF2_THEAB RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|217037786|gb|ACJ76308.1| peptide chain release factor 2 [Thermosipho africanus TCF52B]
gi|407514360|gb|EKF49187.1| peptide chain release factor 2 [Thermosipho africanus H17ap60334]
Length = 369
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 158/344 (45%), Positives = 223/344 (64%), Gaps = 5/344 (1%)
Query: 99 IKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEH 158
I K +N L L ++ + W D A IS++ + + ++K E + +
Sbjct: 20 IIKVFHPENKRKELEELEKQMGDSDFWSDQRKAREISQKAQRIRKIIDDMKDIEAKFEDL 79
Query: 159 IDMIKLAREENDTELELESLEALLT-MRRKSKEKELDALLSGELDPCSCYIEVQAGAGGT 217
I+L+ E+ +E+++ ++ + +K K EL+ +L+G+ D + Y+ + GAGGT
Sbjct: 80 DAAIELSDEDQSF---VETIKEMVEEIEKKVKTFELELILNGKFDASNAYLTIHPGAGGT 136
Query: 218 ESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVH 277
ES DWASM+L+MY WA+R+G+ V ++D PGE AGIK A I + G+YA+GY K E GVH
Sbjct: 137 ESQDWASMLLRMYMRWAERKGFDVQIVDYQPGEEAGIKSAMIYIKGDYAYGYLKYERGVH 196
Query: 278 RLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTD 337
RLVRISPFD+ KRRHTSFA+V VIP ++IN DLRI+ +R+ GAGGQ+ N T+
Sbjct: 197 RLVRISPFDANKRRHTSFASVNVIPEID-DDIDIEINPEDLRIDTYRASGAGGQYVNKTE 255
Query: 338 SAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDIS 397
SAVRI HIPTGI TCQ ERSQ QNK +A+ VL++R+ QLE+ ++ + E L DIS
Sbjct: 256 SAVRITHIPTGIVVTCQTERSQLQNKETALKVLKARLYQLELEKRQKQLEEIQGELKDIS 315
Query: 398 WGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
WGNQIR+YV PY MVKD RTN E + D+V++G++D FI S L
Sbjct: 316 WGNQIRSYVFQPYTMVKDHRTNVETGNIDAVMDGEIDIFIESEL 359
>gi|218282777|ref|ZP_03488959.1| hypothetical protein EUBIFOR_01545 [Eubacterium biforme DSM 3989]
gi|218216361|gb|EEC89899.1| hypothetical protein EUBIFOR_01545 [Eubacterium biforme DSM 3989]
Length = 346
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 151/325 (46%), Positives = 210/325 (64%), Gaps = 1/325 (0%)
Query: 121 KPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEA 180
+P+ W D A ++ R +L + + + +L D + E D EL + + E
Sbjct: 22 EPDFWQDQKKAQQVIRAKNALKDIVDRYEELDLQLNSLNDTADELKSEFDEELMMIAEEE 81
Query: 181 LLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYR 240
+ M +K + E+ LLS E D + +E+ GAGGTES DWASM+ +MY +A++ G++
Sbjct: 82 YMDMDKKFENFEIQVLLSHEYDQNNAILEIHPGAGGTESCDWASMLYRMYTRYAEKHGFK 141
Query: 241 VTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAV 300
VT++D +PG+ AGIK T V+G+ A+GY K+E GVHRLVRISPFDSG RRHTSFA++ V
Sbjct: 142 VTVLDYLPGDEAGIKSVTFLVEGDKAYGYLKSEKGVHRLVRISPFDSGARRHTSFASLDV 201
Query: 301 IPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQH 360
+P D + I DL +E R+ GAGGQH N TDSAVR++H PTGI ATCQN RSQH
Sbjct: 202 MPQFND-EIEIDIKPEDLIVETKRASGAGGQHINKTDSAVRMVHKPTGIVATCQNGRSQH 260
Query: 361 QNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNY 420
+N+ + VL+SR+ QLEI Q + A+ + WG+QIR+YV+HPY +VKD+RT Y
Sbjct: 261 ENREECLRVLKSRLYQLEIEEQEKKIAQIKGVQSANEWGSQIRSYVMHPYSLVKDVRTGY 320
Query: 421 EVSDPDSVLEGDLDGFILSYLSASL 445
E S SVL+GDLD FI +YL + +
Sbjct: 321 ETSQVQSVLDGDLDEFIFAYLKSQI 345
>gi|313669297|ref|YP_004049581.1| peptide chain release factor 2 [Neisseria lactamica 020-06]
gi|313006759|emb|CBN88229.1| peptide chain release factor 2 [Neisseria lactamica 020-06]
Length = 367
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 151/343 (44%), Positives = 222/343 (64%), Gaps = 2/343 (0%)
Query: 99 IKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEH 158
I+ + ++ RL + P LW+D A I +E L G + + + ++
Sbjct: 23 IRVYMDYQGKKDRLEEVVGLSEDPELWNDQKRAQEIGKERKILEGIVLTLDNIASGIEDN 82
Query: 159 IDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTE 218
+I++ EEND E E + + ++ + E + + DP +C+I++ AGAGGTE
Sbjct: 83 RMLIEMTVEENDEEGFAAVQEDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTE 142
Query: 219 SMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHR 278
+ DWA M+ +MY +A+R+G+++ +++E GEIAGI RATI+V+GEYA+G + E GVHR
Sbjct: 143 AEDWAGMLFRMYSRYAERKGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHR 202
Query: 279 LVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDS 338
LVR SPFDS +RHTSFA+V V P D S ++IN +DLRI+ +R+ GAGGQH N TDS
Sbjct: 203 LVRYSPFDSNNKRHTSFASVFVYPEI-DDSIEIEINPADLRIDTYRASGAGGQHINKTDS 261
Query: 339 AVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISW 398
AVRI H PTGI CQN+RSQH NKA+AM +L+S++ +LE+ ++ + + +D+ W
Sbjct: 262 AVRITHEPTGIVVQCQNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGW 321
Query: 399 GNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
G+QIR+YVL R +KDLRT YEV + +VL+GDLDGFI + L
Sbjct: 322 GSQIRSYVLDSSR-IKDLRTGYEVGNTKAVLDGDLDGFIEASL 363
>gi|222530070|ref|YP_002573952.1| hypothetical protein Athe_2103 [Caldicellulosiruptor bescii DSM
6725]
gi|222456917|gb|ACM61179.1| hypothetical protein Athe_2103 [Caldicellulosiruptor bescii DSM
6725]
Length = 372
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 151/335 (45%), Positives = 220/335 (65%), Gaps = 1/335 (0%)
Query: 108 LNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLARE 167
L L L E +KP W D ++ RI ++ + K++ + + + + +L+ E
Sbjct: 30 LESELKSLETETSKPEFWQDIENSQRILQKIKRIKDKIERFQKLYSQWEDLKVLTELSIE 89
Query: 168 ENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVL 227
E + E+ E + L+++ RK E +++ LL+G D + + + AGAGGTE+ DWA M+L
Sbjct: 90 EGNHEMSEELEKELISLERKIDEFKIEILLNGPYDKNNAILSIHAGAGGTEAQDWAEMLL 149
Query: 228 QMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDS 287
+MY WA ++GY+V +D +PGE AGIK TI++ GE A+GY KAE GVHRLVRISPFD+
Sbjct: 150 RMYTRWAAKKGYKVETLDILPGEEAGIKNVTIRIVGENAYGYLKAEKGVHRLVRISPFDA 209
Query: 288 GKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPT 347
RRHTSFAAV V+P D T ++I E DL I+ +RS GAGGQH N T+SAVRI HIPT
Sbjct: 210 AGRRHTSFAAVEVLPEVED-DTDIEIKEEDLEIDTYRSSGAGGQHVNKTESAVRIKHIPT 268
Query: 348 GITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVL 407
GI TCQNERSQH+N+ A+ +L++++ +L+ + + + T+I WGNQIR+YV
Sbjct: 269 GIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQTEIGWGNQIRSYVF 328
Query: 408 HPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
PY +VKD RT EV + ++V++G++D FI +YL
Sbjct: 329 CPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYLK 363
>gi|157803496|ref|YP_001492045.1| peptide chain release factor 2 [Rickettsia canadensis str. McKiel]
gi|157784759|gb|ABV73260.1| peptide chain release factor 2 [Rickettsia canadensis str. McKiel]
Length = 350
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 152/343 (44%), Positives = 227/343 (66%), Gaps = 5/343 (1%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL L+ P+LW+D V+A + RE +L K+ + + L + +++ LA END
Sbjct: 13 RLKELAELTTNPDLWNDQVNAQTLLREKSTLEEKLNTLNKLKSNLKDTLELEALAETEND 72
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
E + + L + + + E + L SGE D +C++E+ AGAGGTES DWAS++++MY
Sbjct: 73 LETLAQVKQDLKNLSIIAAKFETEYLFSGEADCNNCFLEINAGAGGTESHDWASIMMRMY 132
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
+A+R ++ +++ + GE AGIK TI++ G+ A+G+ K E GVHRLVRISPF++ +
Sbjct: 133 LRFAERLDFKTEIINMINGEEAGIKSCTIRIIGKRAYGWFKTEAGVHRLVRISPFNAAGK 192
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
R TSFA+ V P D + + I++ DLRI+ FR+ GAGGQH NTTDSAVRI HIPTG
Sbjct: 193 RMTSFASSWVYPEI-DDNISITIDDKDLRIDTFRASGAGGQHVNTTDSAVRITHIPTGTV 251
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQ++RSQH+NKA AM +L++++ +LE+ ++ E + TD SWG+QIR+Y+L PY
Sbjct: 252 TQCQSDRSQHKNKAQAMRMLKAKLYELEMQKRTDNINEQNAAKTDNSWGHQIRSYILQPY 311
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKDEGGQQ 453
+MVKDLRT+YE SD VL+G+L+ F+ SASL + G ++
Sbjct: 312 QMVKDLRTDYETSDTRGVLDGNLEEFV----SASLAMNAGSKR 350
>gi|398794940|ref|ZP_10554901.1| peptide chain release factor 2 [Pantoea sp. YR343]
gi|398207639|gb|EJM94386.1| peptide chain release factor 2 [Pantoea sp. YR343]
Length = 364
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 150/335 (44%), Positives = 220/335 (65%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++AEL +P++W++P A + +E SL ++ + Q L + ++ LA E +D
Sbjct: 32 RLEEVNAELEQPDVWNEPERAQALGKERASLEAVVETLDHMTQGLEDVQGLLDLAVEADD 91
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
E E++ L + K E E + SGE D CY+++QAG+GGTE+ DWASM+L+MY
Sbjct: 92 EETFNEAVAELDALEVKLGELEFRRMFSGEYDSADCYMDIQAGSGGTEAQDWASMLLRMY 151
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA+ +GY+ +++E GE+AG K ATIK+ G+YAFG+ + E GVHRLVR SPFDSG R
Sbjct: 152 LRWAEAKGYKTEIIEESDGEVAGTKSATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGR 211
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSF++V + P D + + IN +DLRI+ +R+ GAGGQH N T+SAVRI H+PT I
Sbjct: 212 RHTSFSSVFIYPEV-DDNIDIDINPADLRIDVYRASGAGGQHVNKTESAVRITHLPTNIV 270
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+NK A L++++ + E+ ++ + +DI WG+QIR+YVL
Sbjct: 271 VQCQNDRSQHKNKDQAFKQLRAKLYEYEMQKKNADKQAAEDNKSDIGWGSQIRSYVLDDS 330
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT+ E + +VL+GD+D FI + L A L
Sbjct: 331 R-IKDLRTSVETRNTQAVLDGDIDRFIEASLKAGL 364
>gi|387138177|ref|YP_005694156.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis CIP 52.97]
gi|389849923|ref|YP_006352158.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis 258]
gi|349734655|gb|AEQ06133.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis CIP 52.97]
gi|388247229|gb|AFK16220.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis 258]
Length = 366
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 161/347 (46%), Positives = 228/347 (65%), Gaps = 12/347 (3%)
Query: 95 SIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQE 154
++ I+K + + L R+ L + + P LWD+P HA +++ E S+ ++K++ + Q
Sbjct: 15 TLTTIEKVMDPEELASRVRELEQQASDPTLWDNPDHAQKVTTELSSVQAQLKKLTSLRQR 74
Query: 155 LLEHIDMIKLAREEND-TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAG 213
+ + M +LA EE D TEL E L L + + + E+ +LSGE D I +++G
Sbjct: 75 IDDMPVMYELAEEEGDGTELADEELAELTS---EIESLEVKTMLSGEYDAREAVINIRSG 131
Query: 214 AGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAE 273
AGG ++ DWA M+++MY WA++ +V + D E AGIK AT V GEY +G E
Sbjct: 132 AGGVDAADWAEMLMRMYVRWAEKNDRKVDIYDISYAEEAGIKSATFVVHGEYMYGQLSVE 191
Query: 274 VGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHA 333
G HRLVRISPFD+ RR TSFA + V+P + + H+ I +S++R++ +RS G GGQ
Sbjct: 192 QGAHRLVRISPFDNQGRRQTSFAEIEVLPVV-EQTDHIDIPDSEVRMDVYRSSGPGGQSV 250
Query: 334 NTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ---AQMNAEHT 390
NTTDSAVR+ HIPTGI TCQNE+SQ QNKASAM VLQ+++ LE RQ A+++A
Sbjct: 251 NTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKL--LEKKRQEERAELDA--L 306
Query: 391 QSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
+ + SWGNQ+R+YVLHPY+MVKDLRTNYEV+DP VL+GDLDGF+
Sbjct: 307 GAGGNASWGNQMRSYVLHPYQMVKDLRTNYEVNDPQKVLDGDLDGFL 353
>gi|358447104|ref|ZP_09157638.1| peptide chain release factor 2 [Corynebacterium casei UCMA 3821]
gi|356606976|emb|CCE55993.1| peptide chain release factor 2 [Corynebacterium casei UCMA 3821]
Length = 367
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 158/349 (45%), Positives = 227/349 (65%), Gaps = 11/349 (3%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
++ ++ I+K + + L R+ L A+ P+LWDDP HA +++ E + GK++++
Sbjct: 12 LSATLTTIEKVMDPRALEERVRELEAQAGDPSLWDDPNHAQKVTSELSATQGKLRKLTTL 71
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
L + M +LA EE D L E L+A+ R + E+ +LSGE D I ++
Sbjct: 72 RGRLEDLPVMYELAEEEGDASLADEELDAV---REAIESLEVTTMLSGEYDQREAVINIR 128
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
+GAGG ++ DWA M+++MY WA++ G++V + D E AGIK AT V GEY +G
Sbjct: 129 SGAGGVDAADWAEMLMRMYTRWAEKHGHKVDIYDVSYAEEAGIKSATFVVHGEYMYGTLS 188
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
E G HRLVR+SPFD+ RR TSFA V V+P + + ++I +S++R++ +RS G GGQ
Sbjct: 189 VEQGAHRLVRLSPFDNQNRRQTSFAEVEVLPVV-EQTDSIEIPDSEIRVDVYRSSGPGGQ 247
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ---AQMNAE 388
NTTDSAVR+ H+PTGI TCQNE+SQ QNKASAM VLQ+++ LE RQ A+M+A
Sbjct: 248 SVNTTDSAVRLTHVPTGIVVTCQNEKSQIQNKASAMRVLQAKL--LERKRQEERAEMDA- 304
Query: 389 HTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
+ + SWGNQ+R+YVLHPY+MVKDLRTN+EV DP VL G++D F+
Sbjct: 305 -LGAGGNASWGNQMRSYVLHPYQMVKDLRTNHEVGDPSKVLGGEIDDFL 352
>gi|171463253|ref|YP_001797366.1| peptide chain release factor 2 [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|171192791|gb|ACB43752.1| peptide chain release factor 2 [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 349
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 146/331 (44%), Positives = 217/331 (65%), Gaps = 2/331 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL +++ L P +WDD A + +E L G + + + +++ +A+EE+D
Sbjct: 17 RLTEINSILEDPTIWDDQKKAQALGKEKKLLDGIVATLTDLNTNITSALELFDMAKEESD 76
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
E + + + + E + E+D C+C+I++QAGAGGTE+ DWASM+ + Y
Sbjct: 77 FETIAAIEQDVEGYSKIIGDLEFRRMFHNEMDSCNCFIDIQAGAGGTEACDWASMLYRQY 136
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
+ +R+GY+ +++E G++AGIK ATIKVDGEYA+G+ ++E GVHRLVR SPFDS
Sbjct: 137 LKYCERKGYKTEILEESDGDVAGIKSATIKVDGEYAYGHLRSETGVHRLVRKSPFDSSNG 196
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSFA++ V P D S +++N +D+R + +R+ GAGGQH N TDSAVR+ HIPTGI
Sbjct: 197 RHTSFASIYVYPEI-DDSIEIEVNPADIRTDTYRASGAGGQHINKTDSAVRLTHIPTGIV 255
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+N+A AM +L+SR+ + E+ ++ + S TD+ WG+QIR+YVL
Sbjct: 256 VQCQNDRSQHRNRAEAMTMLKSRLYEHEMQKRRAEQDKLEASKTDVGWGHQIRSYVLDQS 315
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
R +KDLRTN E+S+ VL+GDLD FI + L
Sbjct: 316 R-IKDLRTNVEISNTQKVLDGDLDAFIEASL 345
>gi|426400945|ref|YP_007019917.1| peptide chain release factor 2 [Candidatus Endolissoclinum patella
L2]
gi|425857613|gb|AFX98649.1| peptide chain release factor 2 [Candidatus Endolissoclinum patella
L2]
Length = 310
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 146/302 (48%), Positives = 207/302 (68%), Gaps = 1/302 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
+E L +MK++KA E+ + ++ L + E+DT E+ L + K+++ +
Sbjct: 2 QERNHLKKQMKDMKALEEAFEDATILLSLGKSEDDTNTLAEARGELELILVKAQKMCIST 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
+LSGE D C CY+EV AGAGGTE+ WA +L+MY WA+R+ Y++ ++E PGE G+K
Sbjct: 62 MLSGENDQCDCYLEVHAGAGGTEAQSWADTLLRMYTRWAERKSYKIEWLEESPGEETGLK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATIK+ G A G+ K E GVHRLVRISP+DS RRHTSF++V V P D S ++ I +
Sbjct: 122 SATIKILGHNAHGWLKTESGVHRLVRISPYDSQARRHTSFSSVWVYPVV-DDSINIFIED 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
DL+I+ +R+ GAGGQH N TDSA+RI HIP+GI CQN+RSQH+N+ASAM VL++R+
Sbjct: 181 KDLKIDTYRASGAGGQHVNRTDSAIRITHIPSGIVVQCQNDRSQHRNRASAMNVLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ R+ S ++I WG+QIR+YVL PY+MVKDLRT E S+P +VL+GD+D
Sbjct: 241 EAELQRRGDEAHATEASKSEIGWGHQIRSYVLQPYQMVKDLRTGEESSNPSAVLDGDIDA 300
Query: 436 FI 437
F+
Sbjct: 301 FL 302
>gi|301335943|ref|ZP_07224187.1| peptide chain release factor 2 [Chlamydia trachomatis L2tet1]
gi|339626137|ref|YP_004717616.1| peptide chain release factor 2 [Chlamydia trachomatis L2c]
gi|339460691|gb|AEJ77194.1| peptide chain release factor 2 [Chlamydia trachomatis L2c]
Length = 334
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 154/323 (47%), Positives = 207/323 (64%), Gaps = 10/323 (3%)
Query: 124 LWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREE----NDTELELESLE 179
WDD AG+IS L ++ E EL + I+ E+ D E++ E +
Sbjct: 10 FWDDVARAGKISERIARLKQQLSEF----NELKNKVSTIQFFLEDEESSKDLEMQKELEK 65
Query: 180 ALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGY 239
+ +K E E LLSGELD SC++ + AGAGGTES DW MVL+MY WA +
Sbjct: 66 EFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMVLRMYMRWASSHSW 125
Query: 240 RVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVA 299
RV ++D + GE+AGIK T+K+ GEYA+GYAKAE GVHRLVRISPFDS +RHTSFA+V
Sbjct: 126 RVEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHTSFASVE 185
Query: 300 VIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQ 359
V P D V+I+ D+RI+ +RS GAGGQH N TDSAVRI H PTGI +CQNERSQ
Sbjct: 186 VFPEI-DDKIEVEIHPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSCQNERSQ 244
Query: 360 HQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTN 419
QN+ + M +L++R+ Q + + + ++ +ISWG+QIR YV PY +VKD+RT
Sbjct: 245 IQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGSQIRNYVFQPYTLVKDVRTG 304
Query: 420 YEVSDPDSVLEGD-LDGFILSYL 441
YEV + ++++G+ LD FI +YL
Sbjct: 305 YEVGNIQAMMDGELLDAFIKAYL 327
>gi|385240906|ref|YP_005808747.1| peptide chain release factor 2 [Chlamydia trachomatis G/11222]
gi|296436914|gb|ADH19084.1| peptide chain release factor 2 [Chlamydia trachomatis G/11222]
Length = 334
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 153/323 (47%), Positives = 208/323 (64%), Gaps = 10/323 (3%)
Query: 124 LWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREE----NDTELELESLE 179
WDD V AG+IS L ++ E EL + I+ E+ D E++ E +
Sbjct: 10 FWDDVVRAGKISERIARLKQQLSEF----NELKNKVSAIQFFLEDEESSKDLEMQKELEK 65
Query: 180 ALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGY 239
+ +K E E LLSGELD SC++ + AGAGGTES DW M+L+MY WA +
Sbjct: 66 EFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMLLRMYMRWASSHSW 125
Query: 240 RVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVA 299
R+ ++D + GE+AGIK T+K+ GEYA+GYAKAE GVHRLVRISPFDS +RHTSFA+V
Sbjct: 126 RIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHTSFASVE 185
Query: 300 VIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQ 359
V P D+ V+I D+RI+ +RS GAGGQH N TDSAVRI H PTGI +CQNERSQ
Sbjct: 186 VFPEI-DNKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSCQNERSQ 244
Query: 360 HQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTN 419
QN+ + M +L++R+ Q + + + ++ +ISWG+QIR YV PY +VKD+RT
Sbjct: 245 IQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGSQIRNYVFQPYTLVKDVRTG 304
Query: 420 YEVSDPDSVLEGD-LDGFILSYL 441
YEV + ++++G+ LD FI +YL
Sbjct: 305 YEVGNIQAMMDGELLDAFIKAYL 327
>gi|67459393|ref|YP_247017.1| peptide chain release factor 2 [Rickettsia felis URRWXCal2]
gi|75536187|sp|Q4UKS1.1|RF2_RICFE RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|67004926|gb|AAY61852.1| Peptide chain release factor RF-2 [Rickettsia felis URRWXCal2]
Length = 368
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 158/368 (42%), Positives = 240/368 (65%), Gaps = 5/368 (1%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
+++ I QS++++ + L ++ RLN L + P+LW+D +A + RE +L K+
Sbjct: 6 ENYVKKIEQSLELLWRSLDVESSTERLNELEELTSDPSLWNDQANAQTLLREKSNLEEKL 65
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
+ L + +++ ++A END E + + L + + + E + L SGE D +
Sbjct: 66 NAFNKLKSNLKDTLELEEMAEAENDLETLSQIEQDLKNLSVIAAKFETECLFSGEADGNN 125
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
C++E+ AGAGGTES DW S++++MY +A+R G++ +++ + GE AGIK TI++ G+
Sbjct: 126 CFLEINAGAGGTESHDWVSIMMRMYLRFAERLGFKTEIINMINGEEAGIKSCTIRIIGKR 185
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
A+G+ K E GVHRLVRISPF++ +R TSFA+ V P D + + I + DLRI+ FR+
Sbjct: 186 AYGWFKTEAGVHRLVRISPFNAAGKRMTSFASSWVYPEI-DDNIAITIEDKDLRIDTFRA 244
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQM 385
GAGGQH NTTDSAVRI HIPT CQ++RSQH+NKA AM +LQ+++ +LE+ ++
Sbjct: 245 SGAGGQHVNTTDSAVRITHIPTNTVTQCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDS 304
Query: 386 NAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
E + TD SWG+QIR+YVL PY+MVKDLRT+YE SD VL+GDL+ F+ SASL
Sbjct: 305 VNEQNAAKTDNSWGHQIRSYVLQPYQMVKDLRTDYETSDTKGVLDGDLEDFV----SASL 360
Query: 446 DKDEGGQQ 453
+ GG++
Sbjct: 361 AMNAGGRR 368
>gi|166154673|ref|YP_001654791.1| peptide chain release factor 2 [Chlamydia trachomatis 434/Bu]
gi|238687385|sp|B0B832.1|RF2_CHLT2 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|165930661|emb|CAP04158.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis
434/Bu]
Length = 368
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 156/335 (46%), Positives = 211/335 (62%), Gaps = 10/335 (2%)
Query: 112 LNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREE--- 168
L L + + WDD AG+IS L ++ E EL + I+ E+
Sbjct: 32 LKELEQQAVQDGFWDDVARAGKISERIARLKQQLSEF----NELKNKVSTIQFFLEDEES 87
Query: 169 -NDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVL 227
D E++ E + + +K E E LLSGELD SC++ + AGAGGTES DW MVL
Sbjct: 88 SKDLEMQKELEKEFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMVL 147
Query: 228 QMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDS 287
+MY WA +RV ++D + GE+AGIK T+K+ GEYA+GYAKAE GVHRLVRISPFDS
Sbjct: 148 RMYMRWASSHSWRVEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDS 207
Query: 288 GKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPT 347
+RHTSFA+V V P D V+I+ D+RI+ +RS GAGGQH N TDSAVRI H PT
Sbjct: 208 NAKRHTSFASVEVFPEI-DDKIEVEIHPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPT 266
Query: 348 GITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVL 407
GI +CQNERSQ QN+ + M +L++R+ Q + + + ++ +ISWG+QIR YV
Sbjct: 267 GIVVSCQNERSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGSQIRNYVF 326
Query: 408 HPYRMVKDLRTNYEVSDPDSVLEGD-LDGFILSYL 441
PY +VKD+RT YEV + ++++G+ LD FI +YL
Sbjct: 327 QPYTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYL 361
>gi|14195074|sp|P58105.1|RF2_CHLMU RecName: Full=Peptide chain release factor 2; Short=RF-2
Length = 369
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 153/327 (46%), Positives = 211/327 (64%), Gaps = 10/327 (3%)
Query: 121 KPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREE----NDTELELE 176
+ + WDD AGRIS + L ++ E EL I+ IK E+ D E++ E
Sbjct: 42 QDSFWDDVSRAGRISEKIARLKQQLLEY----NELKNKINSIKFFLEDEESSKDLEIQKE 97
Query: 177 SLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQR 236
+ + +K E E LL+GELD SC++ + AGAGGTES DW M+ +MY WA
Sbjct: 98 LEKEFIFCEKKIAEWETLRLLAGELDRNSCFLSINAGAGGTESCDWVEMLFRMYSRWANS 157
Query: 237 RGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFA 296
G++V ++D + GE+AGIK T+K+ GEYA+GYAKAE GVHRLVRISPFDS +RHTSFA
Sbjct: 158 HGWKVEVIDRLDGEVAGIKHITLKLIGEYAYGYAKAESGVHRLVRISPFDSNAKRHTSFA 217
Query: 297 AVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNE 356
+V V P D V+I D+RI+ +RS GAGGQH N TDSAVRI H PTGI +CQ+E
Sbjct: 218 SVEVFPEI-DDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSCQSE 276
Query: 357 RSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDL 416
RSQ QN+ + M +L++R+ Q + + + + + +ISWG+QIR YV PY +VKD+
Sbjct: 277 RSQIQNREACMNMLRARIYQKLLQERLEKQNTNRKEKKEISWGSQIRNYVFQPYTLVKDV 336
Query: 417 RTNYEVSDPDSVLEGD-LDGFILSYLS 442
RT YEV + ++++G+ LD FI +YL+
Sbjct: 337 RTGYEVGNIQAMMDGELLDAFIKAYLA 363
>gi|399018996|ref|ZP_10721146.1| peptide chain release factor 2 [Herbaspirillum sp. CF444]
gi|398098645|gb|EJL88927.1| peptide chain release factor 2 [Herbaspirillum sp. CF444]
Length = 349
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 148/332 (44%), Positives = 226/332 (68%), Gaps = 4/332 (1%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
+L+ ++ EL P +W+DP A + +E SL + + + +L + D+ +AREE D
Sbjct: 17 KLDQVNGELEDPEVWNDPKRAQDLGKEKKSLENIVHTLIKIDGDLTDTRDLFAMAREEKD 76
Query: 171 TELELESLEA-LLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
E L ++EA T++ + E + S +DP +C+I++QAGAGGTE+ DWASM+L+
Sbjct: 77 -EDTLIAIEADAETLKGLVEGMEFRRMFSNPMDPNNCFIDIQAGAGGTEAQDWASMLLRQ 135
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y + +R+G++ ++++ GE+AGIK ATIKV+GEYA+G+ + E GVHRLVR SPFDS
Sbjct: 136 YLRYCERKGFKAEILEQSDGEVAGIKTATIKVEGEYAYGFLRTETGVHRLVRKSPFDSAN 195
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RHTSF+++ V P D S + IN +D+R++ +R+ GAGGQH N TDSAVR+ H P+GI
Sbjct: 196 GRHTSFSSLFVYPEV-DESFEIDINPADVRVDTYRASGAGGQHINKTDSAVRLTHGPSGI 254
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHP 409
CQN+RSQH+N+A A +L++++ +LE+ ++ + S TD+ WG+QIR+YVL
Sbjct: 255 VVQCQNDRSQHRNRAEAWDMLRAKLFELELRKRMSEQQKLEDSKTDVGWGHQIRSYVLDQ 314
Query: 410 YRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
R +KDLRTN+E+ + +VL+GDLDGFI + L
Sbjct: 315 SR-IKDLRTNFEMGNTKAVLDGDLDGFIAASL 345
>gi|56421641|ref|YP_148959.1| peptide chain release factor 2 [Geobacillus kaustophilus HTA426]
gi|56381483|dbj|BAD77391.1| peptide chain release factor 2 in translation [Geobacillus
kaustophilus HTA426]
Length = 327
Score = 301 bits (771), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 150/324 (46%), Positives = 209/324 (64%), Gaps = 1/324 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
PN WDD A + E +L ++E + E+ +L +EE D EL+ E +E
Sbjct: 4 PNFWDDQKSAQAVISEANALKDLVEEFSSLEERFDNLEVTYELLKEEPDDELQAELVEEA 63
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
+ + E EL LL+ D + +E+ GAGGTES DWASM+L+MY WA+++G++V
Sbjct: 64 KKLMKDFSEFELQLLLNEPYDQNNAILELHPGAGGTESQDWASMLLRMYTRWAEKKGFKV 123
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
+D +PGE AGIK T+ + G A+GY KAE GVHRLVRISPFD+ RRHTSF + V+
Sbjct: 124 ETLDYLPGEEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSCEVV 183
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D + ++I +L+I+ +RS GAGGQH NTTDSAVRI H+PTGI TCQ+ERSQ +
Sbjct: 184 PEL-DDNIEIEIRPEELKIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVVTCQSERSQIK 242
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
N+ AM +L++++ Q ++ Q AE +I WGNQIR+YV HPY +VKD RTN E
Sbjct: 243 NREKAMNMLKAKLYQKKLEEQQAELAELRGEQKEIGWGNQIRSYVFHPYSLVKDHRTNVE 302
Query: 422 VSDPDSVLEGDLDGFILSYLSASL 445
V + +V++G++D FI +YL A L
Sbjct: 303 VGNVQAVMDGEIDVFIDAYLRAKL 326
>gi|403057117|ref|YP_006645334.1| peptide chain release factor 2 [Pectobacterium carotovorum subsp.
carotovorum PCC21]
gi|402804443|gb|AFR02081.1| peptide chain release factor 2 [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 348
Score = 301 bits (771), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 148/335 (44%), Positives = 219/335 (65%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++AEL +P++W++P A + +E SL + + Q L + +++LA EE+D
Sbjct: 16 RLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTIDQLTQGLEDVNGLLELAVEEDD 75
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
E ++ L + K + E + SG+ D CY+++QAG+GGTE+ DWASM+++MY
Sbjct: 76 EETFNDTTVELDALENKLGQLEFRRMFSGQYDSADCYLDIQAGSGGTEAQDWASMLVRMY 135
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA+ +G++ +++E G++AG K ATIK+ G+YAFG+ + E GVHRLVR SPFDSG R
Sbjct: 136 LRWAEAKGFKTEIIEESDGDVAGTKSATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGR 195
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSF++ V P D ++IN +DLRI+ +R+ GAGGQH N T+SAVRI HIPT I
Sbjct: 196 RHTSFSSAFVYPEV-DDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTNIV 254
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+NK AM L++++ + E+ ++ + +DI WG+QIR+YVL
Sbjct: 255 TQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAEKQAMEDNKSDIGWGSQIRSYVLDDS 314
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E + +VL+GDLD FI + L A L
Sbjct: 315 R-IKDLRTGVETRNTQAVLDGDLDKFIEASLKAGL 348
>gi|379022696|ref|YP_005299357.1| peptide chain release factor 2 [Rickettsia canadensis str. CA410]
gi|376323634|gb|AFB20875.1| peptide chain release factor 2 [Rickettsia canadensis str. CA410]
Length = 350
Score = 301 bits (771), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 152/343 (44%), Positives = 227/343 (66%), Gaps = 5/343 (1%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL L+ P+LW+D V+A + RE +L K+ + + L + +++ LA END
Sbjct: 13 RLKELAELTTNPDLWNDQVNAQTLLREQSTLEEKLNTLNKLKSNLKDTLELEALAETEND 72
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
E + + L + + + E + L SGE D +C++E+ AGAGGTES DWAS++++MY
Sbjct: 73 LETLAQVKQDLKNLSIIAAKFETEYLFSGEADCNNCFLEINAGAGGTESHDWASIMMRMY 132
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
+A+R ++ +++ + GE AGIK TI++ G+ A+G+ K E GVHRLVRISPF++ +
Sbjct: 133 LRFAERLDFKTEIINMINGEEAGIKSCTIRIIGKRAYGWFKTEAGVHRLVRISPFNAAGK 192
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
R TSFA+ V P D + + I++ DLRI+ FR+ GAGGQH NTTDSAVRI HIPTG
Sbjct: 193 RMTSFASSWVYPEI-DDNISITIDDKDLRIDTFRASGAGGQHVNTTDSAVRITHIPTGTV 251
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQ++RSQH+NKA AM +L++++ +LE+ ++ E + TD SWG+QIR+Y+L PY
Sbjct: 252 TQCQSDRSQHKNKAQAMRMLKAKLYELEMQKRTDNINEQNAAKTDNSWGHQIRSYILQPY 311
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKDEGGQQ 453
+MVKDLRT+YE SD VL+G+L+ F+ SASL + G ++
Sbjct: 312 QMVKDLRTDYETSDTRGVLDGNLEEFV----SASLAMNVGSKR 350
>gi|288957379|ref|YP_003447720.1| peptide chain release factor RF-2 [Azospirillum sp. B510]
gi|288909687|dbj|BAI71176.1| peptide chain release factor RF-2 [Azospirillum sp. B510]
Length = 322
Score = 301 bits (771), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 146/310 (47%), Positives = 210/310 (67%), Gaps = 1/310 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + +A E++L + +++I++ E D + ++ L +R ++ + ++++
Sbjct: 2 RERTQLDTSVAGYRALERDLSDSLELIEMGEMEEDATVVADAEAQLYGLRDRANKLQIES 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D C++EV AGAGGTE+ DWA M+++MY WA++ GY+ +DE PGE AGIK
Sbjct: 62 LLSGEADANDCFVEVNAGAGGTEAQDWALMLMRMYTRWAEQHGYKTEWLDETPGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
AT+++ G A+G+ K E GVHRLVRISPFDS RR TSFAAV++ P D ++INE
Sbjct: 122 SATVQIKGHNAYGWLKTEAGVHRLVRISPFDSQARRQTSFAAVSISPVI-DDKIDIEINE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
D RI+ +R+ GAGGQH N TDSAVRI HIPT I +CQ ERSQH+N+A A +L++R+
Sbjct: 181 KDCRIDTYRASGAGGQHINKTDSAVRITHIPTNIVVSCQQERSQHKNRAKAWDMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ + A + TDI WG+QIR+YVLHPY+MVKDLRT E S +VL+G LD
Sbjct: 241 ERELKIREDAAAALEATKTDIGWGHQIRSYVLHPYQMVKDLRTEVETSQSQAVLDGALDP 300
Query: 436 FILSYLSASL 445
F+ + L++ +
Sbjct: 301 FLEAALASRI 310
>gi|440540546|emb|CCP66060.1| peptide chain release factor 2 [Chlamydia trachomatis L2/25667R]
Length = 329
Score = 301 bits (771), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 154/323 (47%), Positives = 207/323 (64%), Gaps = 10/323 (3%)
Query: 124 LWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREE----NDTELELESLE 179
WDD AG+IS L ++ E EL + I+ E+ D E++ E +
Sbjct: 5 FWDDVARAGKISERIARLKQQLSEF----NELKNKVSTIQFFLEDEESSKDLEMQKELEK 60
Query: 180 ALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGY 239
+ +K E E LLSGELD SC++ + AGAGGTES DW MVL+MY WA +
Sbjct: 61 EFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMVLRMYMRWASSHSW 120
Query: 240 RVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVA 299
RV ++D + GE+AGIK T+K+ GEYA+GYAKAE GVHRLVRISPFDS +RHTSFA+V
Sbjct: 121 RVEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHTSFASVE 180
Query: 300 VIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQ 359
V P D V+I+ D+RI+ +RS GAGGQH N TDSAVRI H PTGI +CQNERSQ
Sbjct: 181 VFPEI-DDKIEVEIHPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSCQNERSQ 239
Query: 360 HQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTN 419
QN+ + M +L++R+ Q + + + ++ +ISWG+QIR YV PY +VKD+RT
Sbjct: 240 IQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGSQIRNYVFQPYTLVKDVRTG 299
Query: 420 YEVSDPDSVLEGD-LDGFILSYL 441
YEV + ++++G+ LD FI +YL
Sbjct: 300 YEVGNIQAMMDGELLDAFIKAYL 322
>gi|427414371|ref|ZP_18904561.1| peptide chain release factor 2 [Veillonella ratti ACS-216-V-Col6b]
gi|425714747|gb|EKU77750.1| peptide chain release factor 2 [Veillonella ratti ACS-216-V-Col6b]
Length = 330
Score = 301 bits (771), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 144/323 (44%), Positives = 215/323 (66%), Gaps = 1/323 (0%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
++ P W+DP A IS+E L ++ KA E+ + M+++A +E D +E E
Sbjct: 1 MSDPEFWNDPDSAKEISQEATQLKDAVEGYKALVSEIEDLKLMLEMAIDEQDVSMESELK 60
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
++ + + + +E+ LLSGE D + + AGAGGTE+ DW SM+++MY WA++ G
Sbjct: 61 TSVEHITEEVERREVLLLLSGEYDTNNAILTFHAGAGGTEAQDWVSMLIRMYLRWAEQHG 120
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
+ +T+MDE PG+ AGIK AT + GE AFGY K+E GVHRLVRISPFD+ RRHTSFAAV
Sbjct: 121 FAITMMDEQPGDEAGIKSATFLIKGENAFGYLKSEKGVHRLVRISPFDANARRHTSFAAV 180
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
V+P D + + ++ D+R++ +R+ GAGGQH N TDSA+R+ HIPTG+ CQ+ERS
Sbjct: 181 DVMPEI-DDTVDIHLDMKDVRVDTYRASGAGGQHINKTDSAIRMTHIPTGVVVQCQSERS 239
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
Q QN+ A+ +L++++ +LE+ +QA++ + + I WG+QIR+YV HPY +VKD RT
Sbjct: 240 QIQNREQALKLLRAKLFELELEKQAELKEKIGGTYQAIEWGSQIRSYVFHPYNLVKDHRT 299
Query: 419 NYEVSDPDSVLEGDLDGFILSYL 441
E + SV++G+LD F+ YL
Sbjct: 300 GVETGNIQSVMDGNLDAFMEGYL 322
>gi|124267958|ref|YP_001021962.1| peptide chain release factor 2 [Methylibium petroleiphilum PM1]
gi|124260733|gb|ABM95727.1| bacterial peptide chain release factor 2 (bRF-2) [Methylibium
petroleiphilum PM1]
Length = 355
Score = 301 bits (771), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 152/332 (45%), Positives = 223/332 (67%), Gaps = 4/332 (1%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL+ ++A L P +W+DP +A + RE SL + + + E+ L ++ ++ ++++EE D
Sbjct: 23 RLSEVNAALEDPTVWNDPKNAQALGREKKSLETVVDTIASLERNLADNAELYEMSKEEGD 82
Query: 171 TELELESLEA-LLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
E L ++EA L + + ++ E + S DP +C+I++QAGAGGTE+ DWASM+L+
Sbjct: 83 -EDGLRAIEAETLGLAAQVEQLEFRRMFSNPADPSNCFIDIQAGAGGTEACDWASMLLRQ 141
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y + +R+G++ T+ DE G+ AGIK ATIKV+G+YAFG+ + E GVHRLVR SPFDS
Sbjct: 142 YLKYCERKGFKATIEDETEGDTAGIKSATIKVEGDYAFGHLRTETGVHRLVRKSPFDSSG 201
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RHTSFA++ V P D S ++IN +D+R + FR+ GAGGQH N TDSAVR+ HIPTGI
Sbjct: 202 GRHTSFASLFVYPEV-DDSIEIEINPADVRTDTFRASGAGGQHINKTDSAVRLTHIPTGI 260
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHP 409
CQ+ RSQH N+ A L+SR+ E+ ++ + + + TD+ WG+QIR+YVL
Sbjct: 261 VVQCQDGRSQHSNRDVAWKRLRSRLYDHEMRKRQEEQQKLEDTKTDVGWGHQIRSYVLDN 320
Query: 410 YRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
R +KDLRTN E+S+ VL+GDLD FI + L
Sbjct: 321 SR-IKDLRTNVEISNTQKVLDGDLDAFIEASL 351
>gi|73540774|ref|YP_295294.1| peptide chain release factor 2 [Ralstonia eutropha JMP134]
gi|72118187|gb|AAZ60450.1| bacterial peptide chain release factor 2 (bRF-2) [Ralstonia
eutropha JMP134]
Length = 357
Score = 301 bits (771), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 156/337 (46%), Positives = 226/337 (67%), Gaps = 6/337 (1%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++ L P++W++P A + +E +L G + + +L ++ +LA+EE D
Sbjct: 25 RLEEVNGLLEDPDVWNNPKRAQDLGKEKKALEGVVSVLGKLTDDLNGADELFELAKEEGD 84
Query: 171 TELELESLEA-LLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
E LES+E + E + +GE+D + +I++QAGAGGTE+ DWASM+L+
Sbjct: 85 DET-LESIETDVKGFEEIVAGMEFRRMFAGEMDQANAFIDIQAGAGGTEACDWASMLLRQ 143
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y + +R+G++ +++E G++AGIK ATIK++GEYAFGY + E GVHRLVR SPFDS
Sbjct: 144 YLKYCERKGFKAEVLEESEGDVAGIKSATIKIEGEYAFGYLRTETGVHRLVRKSPFDSSG 203
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RHTSF++V V P D S V++N +DLR++ +R+ GAGGQH N TDSAVRI HIPTGI
Sbjct: 204 GRHTSFSSVFVYPEV-DDSFEVEVNPADLRVDTYRASGAGGQHINKTDSAVRITHIPTGI 262
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQS-LTDISWGNQIRTYVLH 408
CQN+RSQH+N+A AM +L+SR+ + E+ R+ Q A+ ++ TD+ WG+QIR+YVL
Sbjct: 263 VVQCQNDRSQHRNRAEAMSMLKSRLYEHEM-RKRQAEADKLEAGKTDVGWGHQIRSYVLD 321
Query: 409 PYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRTN E+S+ VL+GDLD FI + L L
Sbjct: 322 QSR-IKDLRTNVEMSNTQKVLDGDLDPFIEASLKQGL 357
>gi|145589652|ref|YP_001156249.1| peptide chain release factor 2 [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145048058|gb|ABP34685.1| bacterial peptide chain release factor 2 (bRF-2) [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
Length = 349
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 146/331 (44%), Positives = 217/331 (65%), Gaps = 2/331 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL +++ L P +WDD A + +E L G + + + I++ +A+EE+D
Sbjct: 17 RLTEVNSILEDPTIWDDQKKAQALGKEKKLLDGVVATLTDLNTNITGAIELFDMAKEESD 76
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
E + + + + + E + E+D C+C+I++QAGAGGTE+ DWASM+ + Y
Sbjct: 77 FETIAAIEQDVQSYSKLIGDLEFRRMFHNEMDSCNCFIDIQAGAGGTEACDWASMLYRQY 136
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
+ +R+GY+ +++E G++AGIK ATIKVDGEYA+G+ ++E GVHRLVR SPFDS
Sbjct: 137 LKYCERKGYKTEILEESDGDVAGIKSATIKVDGEYAYGHLRSETGVHRLVRKSPFDSSNG 196
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSFA++ V P D S + +N +D+R + +R+ GAGGQH N TDSAVR+ H+PTGI
Sbjct: 197 RHTSFASIYVYPEI-DDSIEIDVNPADIRTDTYRASGAGGQHINKTDSAVRLTHLPTGIV 255
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+N+A AM +L+SR+ + E+ ++ + S TD+ WG+QIR+YVL
Sbjct: 256 VQCQNDRSQHRNRAEAMTMLKSRLYEHEMQKRRAEQDKLEASKTDVGWGHQIRSYVLDQS 315
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
R +KDLRTN E+S+ VL+GDLD FI + L
Sbjct: 316 R-IKDLRTNVEISNTQKVLDGDLDAFIEASL 345
>gi|39935519|ref|NP_947795.1| peptide chain release factor 2 [Rhodopseudomonas palustris CGA009]
gi|39649371|emb|CAE27894.1| translation peptide releasing factor RF-2 [Rhodopseudomonas
palustris CGA009]
Length = 322
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 151/307 (49%), Positives = 215/307 (70%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
+E SL + + E+EL ++I+MI+L E D + E+ +AL ++++ +EL+A
Sbjct: 2 QERTSLEDSLTGIGKVERELTDNIEMIELGEAEGDEGIVKEAEDALKALKKEVARRELEA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+EV AGAGGTES DWASM+L+MY WA++ G+++ ++E GE AGIK
Sbjct: 62 LLSGEADRFDTYLEVHAGAGGTESQDWASMLLRMYVRWAEKHGFKIEYLEESEGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI++ G A+G+ K E GVHRLVRISPFDS RRHTSF++V + P D+S + I E
Sbjct: 122 SATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVI-DNSIKIDIAE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD+R++ RSGGAGGQH N T+SAVR+ HIPTG+ CQ RSQH+N+A A +L++R+
Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
++E+ ++ + A + T+I WG+QIR+YVL PY+MVKDLRT + SD VL+GDLD
Sbjct: 241 EIELKKREEQAAADQAAKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDE 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMAATLA 307
>gi|261820184|ref|YP_003258290.1| peptide chain release factor 2 [Pectobacterium wasabiae WPP163]
gi|261604197|gb|ACX86683.1| hypothetical protein Pecwa_0864 [Pectobacterium wasabiae WPP163]
Length = 365
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 150/360 (41%), Positives = 229/360 (63%), Gaps = 2/360 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
K+ +++ V++ L + RL ++AEL +P++W++P A + +E SL +
Sbjct: 8 KNRIQDLSERSAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEVIV 67
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
+ Q L + +++LA EE+D + E+ L + K + E + SG+ D
Sbjct: 68 DTIDQLAQGLEDVAGLLELAVEEDDEDTFNETSLELDVLENKLGQLEFRRMFSGQYDSAD 127
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
CY+++QAG+GGTE+ DWASM+++MY WA+ +G++ +++E G++AG K ATIK+ G+Y
Sbjct: 128 CYLDIQAGSGGTEAQDWASMLVRMYLRWAEAKGFKTEIIEESDGDVAGTKSATIKIIGDY 187
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
AFG+ + E GVHRLVR SPFDSG RRHTSF++ + P D ++IN +DLRI+ +R+
Sbjct: 188 AFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFIYPEV-DDDIDIEINPADLRIDVYRA 246
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQM 385
GAGGQH N T+SAVRI HIPT I CQN+RSQH+NK AM L++++ + E+ ++
Sbjct: 247 SGAGGQHVNRTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAE 306
Query: 386 NAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ +DI WG+QIR+YVL R +KDLRT E + +VL+GDLD FI + L A L
Sbjct: 307 KQAMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASLKAGL 365
>gi|15605186|ref|NP_219972.1| peptide chain release factor 2 [Chlamydia trachomatis D/UW-3/CX]
gi|76789195|ref|YP_328281.1| peptide chain release factor 2 [Chlamydia trachomatis A/HAR-13]
gi|7388051|sp|O84465.1|RF2_CHLTR RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|123606855|sp|Q3KLN9.1|RF2_CHLTA RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|3328893|gb|AAC68059.1| Peptide Chain Release Factor 2 [Chlamydia trachomatis D/UW-3/CX]
gi|76167725|gb|AAX50733.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis
A/HAR-13]
Length = 369
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 155/335 (46%), Positives = 211/335 (62%), Gaps = 10/335 (2%)
Query: 112 LNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREE--- 168
L L + + WDD V AG+IS L ++ E EL + I+ E+
Sbjct: 33 LKELEQQAVQDGFWDDVVRAGKISERIARLKQQLSEF----NELKNKVSAIQFFLEDEES 88
Query: 169 -NDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVL 227
D E++ E + + +K E E LLSGELD SC++ + AGAGGTES DW M+L
Sbjct: 89 SKDLEMQKELEKEFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMLL 148
Query: 228 QMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDS 287
+MY WA +R+ ++D + GE+AGIK T+K+ GEYA+GYAKAE GVHRLVRISPFDS
Sbjct: 149 RMYMRWASSHSWRIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDS 208
Query: 288 GKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPT 347
+RHTSFA+V V P D V+I D+RI+ +RS GAGGQH N TDSAVRI H PT
Sbjct: 209 NAKRHTSFASVEVFPEI-DDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPT 267
Query: 348 GITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVL 407
GI +CQNERSQ QN+ + M +L++R+ Q + + + ++ +ISWG+QIR YV
Sbjct: 268 GIVVSCQNERSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGSQIRNYVF 327
Query: 408 HPYRMVKDLRTNYEVSDPDSVLEGD-LDGFILSYL 441
PY +VKD+RT YEV + ++++G+ LD FI +YL
Sbjct: 328 QPYTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYL 362
>gi|440526268|emb|CCP51752.1| peptide chain release factor 2 [Chlamydia trachomatis L2b/8200/07]
gi|440536093|emb|CCP61606.1| peptide chain release factor 2 [Chlamydia trachomatis L2b/795]
gi|440536986|emb|CCP62500.1| peptide chain release factor 2 [Chlamydia trachomatis L1/440/LN]
gi|440537875|emb|CCP63389.1| peptide chain release factor 2 [Chlamydia trachomatis L1/1322/p2]
gi|440538765|emb|CCP64279.1| peptide chain release factor 2 [Chlamydia trachomatis L1/115]
gi|440539654|emb|CCP65168.1| peptide chain release factor 2 [Chlamydia trachomatis L1/224]
gi|440541434|emb|CCP66948.1| peptide chain release factor 2 [Chlamydia trachomatis L3/404/LN]
gi|440542321|emb|CCP67835.1| peptide chain release factor 2 [Chlamydia trachomatis L2b/UCH-2]
gi|440543212|emb|CCP68726.1| peptide chain release factor 2 [Chlamydia trachomatis L2b/Canada2]
gi|440544103|emb|CCP69617.1| peptide chain release factor 2 [Chlamydia trachomatis L2b/LST]
gi|440544993|emb|CCP70507.1| peptide chain release factor 2 [Chlamydia trachomatis L2b/Ams1]
gi|440545883|emb|CCP71397.1| peptide chain release factor 2 [Chlamydia trachomatis L2b/CV204]
gi|440914145|emb|CCP90562.1| peptide chain release factor 2 [Chlamydia trachomatis L2b/Ams2]
gi|440915035|emb|CCP91452.1| peptide chain release factor 2 [Chlamydia trachomatis L2b/Ams3]
gi|440915926|emb|CCP92343.1| peptide chain release factor 2 [Chlamydia trachomatis L2b/Canada1]
gi|440916821|emb|CCP93238.1| peptide chain release factor 2 [Chlamydia trachomatis L2b/Ams4]
gi|440917711|emb|CCP94128.1| peptide chain release factor 2 [Chlamydia trachomatis L2b/Ams5]
Length = 329
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 154/323 (47%), Positives = 206/323 (63%), Gaps = 10/323 (3%)
Query: 124 LWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREE----NDTELELESLE 179
WDD AG+IS L ++ E EL + I+ E+ D E++ E +
Sbjct: 5 FWDDVARAGKISERIARLKQQLSEF----NELKNKVSTIQFFLEDEESSKDLEMQKELEK 60
Query: 180 ALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGY 239
+ +K E E LLSGELD SC++ + AGAGGTES DW MVL+MY WA +
Sbjct: 61 EFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMVLRMYMRWASSHSW 120
Query: 240 RVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVA 299
RV ++D + GE+AGIK T+K+ GEYA+GYAKAE GVHRLVRISPFDS +RHTSFA+V
Sbjct: 121 RVEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHTSFASVE 180
Query: 300 VIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQ 359
V P D V+I D+RI+ +RS GAGGQH N TDSAVRI H PTGI +CQNERSQ
Sbjct: 181 VFPEI-DDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSCQNERSQ 239
Query: 360 HQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTN 419
QN+ + M +L++R+ Q + + + ++ +ISWG+QIR YV PY +VKD+RT
Sbjct: 240 IQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGSQIRNYVFQPYTLVKDVRTG 299
Query: 420 YEVSDPDSVLEGD-LDGFILSYL 441
YEV + ++++G+ LD FI +YL
Sbjct: 300 YEVGNIQAMMDGELLDAFIKAYL 322
>gi|255311271|ref|ZP_05353841.1| peptide chain release factor 2 [Chlamydia trachomatis 6276]
gi|255317573|ref|ZP_05358819.1| peptide chain release factor 2 [Chlamydia trachomatis 6276s]
gi|385243667|ref|YP_005811513.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Chlamydia
trachomatis D-EC]
gi|385244547|ref|YP_005812391.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Chlamydia
trachomatis D-LC]
gi|385270158|ref|YP_005813318.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Chlamydia
trachomatis A2497]
gi|297748590|gb|ADI51136.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Chlamydia
trachomatis D-EC]
gi|297749470|gb|ADI52148.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Chlamydia
trachomatis D-LC]
gi|347975298|gb|AEP35319.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Chlamydia
trachomatis A2497]
Length = 334
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 153/323 (47%), Positives = 207/323 (64%), Gaps = 10/323 (3%)
Query: 124 LWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREE----NDTELELESLE 179
WDD V AG+IS L ++ E EL + I+ E+ D E++ E +
Sbjct: 10 FWDDVVRAGKISERIARLKQQLSEF----NELKNKVSAIQFFLEDEESSKDLEMQKELEK 65
Query: 180 ALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGY 239
+ +K E E LLSGELD SC++ + AGAGGTES DW M+L+MY WA +
Sbjct: 66 EFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMLLRMYMRWASSHSW 125
Query: 240 RVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVA 299
R+ ++D + GE+AGIK T+K+ GEYA+GYAKAE GVHRLVRISPFDS +RHTSFA+V
Sbjct: 126 RIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHTSFASVE 185
Query: 300 VIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQ 359
V P D V+I D+RI+ +RS GAGGQH N TDSAVRI H PTGI +CQNERSQ
Sbjct: 186 VFPEI-DDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSCQNERSQ 244
Query: 360 HQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTN 419
QN+ + M +L++R+ Q + + + ++ +ISWG+QIR YV PY +VKD+RT
Sbjct: 245 IQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGSQIRNYVFQPYTLVKDVRTG 304
Query: 420 YEVSDPDSVLEGD-LDGFILSYL 441
YEV + ++++G+ LD FI +YL
Sbjct: 305 YEVGNIQAMMDGELLDAFIKAYL 327
>gi|237802887|ref|YP_002888081.1| peptide chain release factor 2 [Chlamydia trachomatis B/Jali20/OT]
gi|237804809|ref|YP_002888963.1| peptide chain release factor 2 [Chlamydia trachomatis B/TZ1A828/OT]
gi|376282468|ref|YP_005156294.1| peptide chain release factor 2 [Chlamydia trachomatis A2497]
gi|231273109|emb|CAX10022.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis
B/TZ1A828/OT]
gi|231274121|emb|CAX10915.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis
B/Jali20/OT]
gi|371908498|emb|CAX09128.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis
A2497]
Length = 368
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 155/335 (46%), Positives = 211/335 (62%), Gaps = 10/335 (2%)
Query: 112 LNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREE--- 168
L L + + WDD V AG+IS L ++ E EL + I+ E+
Sbjct: 32 LKELEQQAVQDGFWDDVVRAGKISERIARLKQQLSEF----NELKNKVSAIQFFLEDEES 87
Query: 169 -NDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVL 227
D E++ E + + +K E E LLSGELD SC++ + AGAGGTES DW M+L
Sbjct: 88 SKDLEMQKELEKEFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMLL 147
Query: 228 QMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDS 287
+MY WA +R+ ++D + GE+AGIK T+K+ GEYA+GYAKAE GVHRLVRISPFDS
Sbjct: 148 RMYMRWASSHSWRIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDS 207
Query: 288 GKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPT 347
+RHTSFA+V V P D V+I D+RI+ +RS GAGGQH N TDSAVRI H PT
Sbjct: 208 NAKRHTSFASVEVFPEI-DDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPT 266
Query: 348 GITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVL 407
GI +CQNERSQ QN+ + M +L++R+ Q + + + ++ +ISWG+QIR YV
Sbjct: 267 GIVVSCQNERSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGSQIRNYVF 326
Query: 408 HPYRMVKDLRTNYEVSDPDSVLEGD-LDGFILSYL 441
PY +VKD+RT YEV + ++++G+ LD FI +YL
Sbjct: 327 QPYTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYL 361
>gi|166155548|ref|YP_001653803.1| peptide chain release factor 2 [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|238687484|sp|B0BC97.1|RF2_CHLTB RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|165931536|emb|CAP07112.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis
L2b/UCH-1/proctitis]
Length = 368
Score = 301 bits (770), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 156/335 (46%), Positives = 210/335 (62%), Gaps = 10/335 (2%)
Query: 112 LNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREE--- 168
L L + + WDD AG+IS L ++ E EL + I+ E+
Sbjct: 32 LKELEQQAVQDGFWDDVARAGKISERIARLKQQLSEF----NELKNKVSTIQFFLEDEES 87
Query: 169 -NDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVL 227
D E++ E + + +K E E LLSGELD SC++ + AGAGGTES DW MVL
Sbjct: 88 SKDLEMQKELEKEFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMVL 147
Query: 228 QMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDS 287
+MY WA +RV ++D + GE+AGIK T+K+ GEYA+GYAKAE GVHRLVRISPFDS
Sbjct: 148 RMYMRWASSHSWRVEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDS 207
Query: 288 GKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPT 347
+RHTSFA+V V P D V+I D+RI+ +RS GAGGQH N TDSAVRI H PT
Sbjct: 208 NAKRHTSFASVEVFPEI-DDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPT 266
Query: 348 GITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVL 407
GI +CQNERSQ QN+ + M +L++R+ Q + + + ++ +ISWG+QIR YV
Sbjct: 267 GIVVSCQNERSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGSQIRNYVF 326
Query: 408 HPYRMVKDLRTNYEVSDPDSVLEGD-LDGFILSYL 441
PY +VKD+RT YEV + ++++G+ LD FI +YL
Sbjct: 327 QPYTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYL 361
>gi|104780459|ref|YP_606957.1| peptide chain release factor 2 [Pseudomonas entomophila L48]
gi|95109446|emb|CAK14147.1| peptide chain release factor 2 [Pseudomonas entomophila L48]
Length = 364
Score = 301 bits (770), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 158/349 (45%), Positives = 224/349 (64%), Gaps = 6/349 (1%)
Query: 97 QVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELL 156
Q I+ L + + + RL ++ EL +W+ P +A + RE L ++ + L
Sbjct: 18 QSIRGYLDYDHKHDRLVEVNRELEDAAVWNKPEYAQALGRERAMLAQVVETLDKLSGGLA 77
Query: 157 EHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGG 216
+ D++ +A EEND + + L + K + E + SGE+D + Y+++QAG+GG
Sbjct: 78 DCQDLLDMAVEENDEGAVGDVVTELEGLEEKLAQLEFRRMFSGEMDMNNAYLDIQAGSGG 137
Query: 217 TESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGV 276
TE+ DWA+++L+MY WA +RG+ T+++ GE+AGIK AT+ + GEYAFG+ + E+GV
Sbjct: 138 TEAQDWANILLRMYLRWADKRGFDATIIELSEGEVAGIKGATVHIKGEYAFGWLRTEIGV 197
Query: 277 HRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTT 336
HRLVR SPFDSG RRHTSF+AV V P D ++IN SDLRI+ +RS GAGGQH NTT
Sbjct: 198 HRLVRKSPFDSGARRHTSFSAVFVSPEI-DDKVEIEINPSDLRIDTYRSSGAGGQHVNTT 256
Query: 337 DSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDI 396
DSAVRI H+PT CQNERSQH NK +AM +L++++ +LE+ ++ + S +DI
Sbjct: 257 DSAVRITHVPTNTVVACQNERSQHANKDTAMKMLRAKLYELEMQKRNAASQALEDSKSDI 316
Query: 397 SWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
WG+QIR+YVL R +KDLRT E SD VL+GDLD YL ASL
Sbjct: 317 GWGHQIRSYVLDDSR-IKDLRTGVERSDCQKVLDGDLD----QYLEASL 360
>gi|348618446|ref|ZP_08884971.1| Peptide chain release factor 2 (RF-2) [Candidatus Glomeribacter
gigasporarum BEG34]
gi|347816246|emb|CCD29716.1| Peptide chain release factor 2 (RF-2) [Candidatus Glomeribacter
gigasporarum BEG34]
Length = 372
Score = 301 bits (770), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 148/332 (44%), Positives = 213/332 (64%), Gaps = 2/332 (0%)
Query: 110 VRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEN 169
RL L+ EL PN+W+ A + +E L + + A + + + ++ LAR +
Sbjct: 39 ARLEALNTELEDPNVWNSSERAQALGKEKKGLENTVLTLTALDADTRDARELFDLARADA 98
Query: 170 DTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
D + S + + E E + DP C+I+ QAGAGGTE+ DWA+M+L++
Sbjct: 99 DEAMLTSSAAEARALDMRIAEIEFRRMFDQPADPNHCFIDFQAGAGGTEACDWAAMLLRL 158
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y + +R+G++ L++E GE+AGIKRATIKV+GEYA+G + E G+HRLVR SPFDSG
Sbjct: 159 YLRYCERKGFQTALLEETAGEVAGIKRATIKVEGEYAYGTLRTETGIHRLVRKSPFDSGG 218
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RHTSFA+V V P D + ++IN +DLRI+ FR+ GAGGQH N TDSA+R+ H+P+GI
Sbjct: 219 SRHTSFASVFVYPEV-DDAISIEINPADLRIDTFRASGAGGQHVNKTDSAIRMTHLPSGI 277
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHP 409
CQN+RSQH+N+A AM +L++R+ + E+ ++ A S TD+ WG QIR+YVL
Sbjct: 278 VVQCQNDRSQHRNRAEAMAMLRARLYEAELRKRQSEQATLEASKTDVGWGRQIRSYVLDQ 337
Query: 410 YRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
R VKDLRT E S+ +VL+GD+D FI+ L
Sbjct: 338 SR-VKDLRTGVETSNTRAVLDGDIDLFIVESL 368
>gi|242129269|gb|ACS83718.1| peptide chain release factor 2 [uncultured bacterium AOCefta2]
Length = 367
Score = 301 bits (770), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 161/339 (47%), Positives = 217/339 (64%), Gaps = 13/339 (3%)
Query: 115 LSAELNKPNLWDDPVHAGRISREHGSLMGKMKEV----KAFEQELLEHIDMIKLAREEND 170
L AE + W+D A +EH + +K V A +++ + ++M ++ + E D
Sbjct: 33 LEAESAAGDFWNDNQRA----QEHLKKLTALKRVVEPWDALDRDTSDSLEMAEMLKAEGD 88
Query: 171 TEL--ELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQ 228
+ ELE A L R + E ++LS D ++ + GAGGTES DWA+M+L+
Sbjct: 89 ESMAPELEKQAAELAQRLN--DLEFKSMLSEAEDVSDSFLHIHPGAGGTESCDWANMLLR 146
Query: 229 MYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSG 288
MY WA+R+G++V L+D PGE AGI R T+ V GEYAFGY KAE GVHRLVRISPFD+
Sbjct: 147 MYTRWAERKGFKVELIDLQPGEGAGISRVTLAVRGEYAFGYLKAESGVHRLVRISPFDAN 206
Query: 289 KRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTG 348
KRRHTSFA+V D V+I + DLRI+ +RS GAGGQH N TDSAVRI HIPT
Sbjct: 207 KRRHTSFASVHAYAEVTD-DIEVEILDKDLRIDTYRSSGAGGQHVNVTDSAVRITHIPTK 265
Query: 349 ITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLH 408
I +CQNERSQH+NKA+AM VL+SR+ QL ++ A DISWG+QIR+YV
Sbjct: 266 IVVSCQNERSQHKNKATAMKVLRSRLYQLYKEQREADQAAKAGEKKDISWGSQIRSYVFQ 325
Query: 409 PYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDK 447
PY+MVKDLRT+ E S+ +V++G +D FI ++L + + K
Sbjct: 326 PYQMVKDLRTDVETSNIGAVMDGAIDPFIEAFLRSQMGK 364
>gi|398800080|ref|ZP_10559356.1| peptide chain release factor 2 [Pantoea sp. GM01]
gi|398096284|gb|EJL86609.1| peptide chain release factor 2 [Pantoea sp. GM01]
Length = 351
Score = 301 bits (770), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 150/335 (44%), Positives = 219/335 (65%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++AEL +P++W++P A + +E SL ++ + Q L + ++ LA E +D
Sbjct: 19 RLEEVNAELEQPDVWNEPERAQALGKERASLEAVVETLDHMRQGLEDVQGLLDLAVEADD 78
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
E E++ L + K E E + SGE D CY+++QAG+GGTE+ DWASM+L+MY
Sbjct: 79 EETFNEAVAELDALEVKLGELEFRRMFSGEYDSADCYMDIQAGSGGTEAQDWASMLLRMY 138
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA+ +GY+ +++E GE+AG K ATIK+ G+YAFG+ + E GVHRLVR SPFDSG R
Sbjct: 139 LRWAEAKGYKTEIIEESDGEVAGTKSATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGR 198
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSF++V + P D + + IN +DLRI+ +R+ GAGGQH N T+SAVRI H+PT I
Sbjct: 199 RHTSFSSVFIYPEV-DDNIDIDINPADLRIDVYRASGAGGQHVNKTESAVRITHLPTNIV 257
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+NK A L++++ + E+ ++ + +DI WG+QIR+YVL
Sbjct: 258 VQCQNDRSQHKNKDQAFKQLRAKLYEYEMHKKNADKQAAEDNKSDIGWGSQIRSYVLDDS 317
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E + +VL+GD+D FI + L A L
Sbjct: 318 R-IKDLRTGVETRNTQAVLDGDIDRFIEASLKAGL 351
>gi|456063655|ref|YP_007502625.1| peptide chain release factor 2 [beta proteobacterium CB]
gi|455440952|gb|AGG33890.1| peptide chain release factor 2 [beta proteobacterium CB]
Length = 349
Score = 301 bits (770), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 145/331 (43%), Positives = 217/331 (65%), Gaps = 2/331 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL +++ L P +WDD A + +E L G + + + +++ +A+EE+D
Sbjct: 17 RLTEVNSILEDPTIWDDQKKAQALGKEKKLLDGVVATLTDLNSNITGALELFDMAKEESD 76
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
E + + + + + E + E+D C+C+I++QAGAGGTE+ DWASM+ + Y
Sbjct: 77 FETIAAIEQDVESYSKIIHDLEFRRMFHNEMDSCNCFIDIQAGAGGTEACDWASMLFRQY 136
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
+ +R+GY+ +++E G++AGIK ATIKVDGEYA+G+ ++E GVHRLVR SPFDS
Sbjct: 137 LKYCERKGYKTEILEESDGDVAGIKSATIKVDGEYAYGHLRSETGVHRLVRKSPFDSSNG 196
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSFA++ V P D S + +N +D+R + +R+ GAGGQH N TDSAVR+ H+PTGI
Sbjct: 197 RHTSFASIYVYPEI-DDSIEIDVNPADIRTDTYRASGAGGQHINKTDSAVRLTHLPTGIV 255
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+N+A AM +L+SR+ + E+ ++ + S TD+ WG+QIR+YVL
Sbjct: 256 VQCQNDRSQHRNRAEAMTMLKSRLYEHEMQKRRAEQDKLEASKTDVGWGHQIRSYVLDQS 315
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
R +KDLRTN E+S+ VL+GDLD FI + L
Sbjct: 316 R-IKDLRTNVEISNTQKVLDGDLDAFIEASL 345
>gi|407774539|ref|ZP_11121837.1| peptide chain release factor 2 [Thalassospira profundimaris WP0211]
gi|407282581|gb|EKF08139.1| peptide chain release factor 2 [Thalassospira profundimaris WP0211]
Length = 321
Score = 301 bits (770), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 149/299 (49%), Positives = 203/299 (67%), Gaps = 1/299 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + K QEL + + +I+L E D E E+ E L ++R + ++EL++
Sbjct: 2 RERTQLDDAINGYKKLAQELEDSVGLIELGEAEGDNETVEEAEEVLRSIRDIAAKRELES 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+E+ AGAGGTE+ DWASM+ +MY WA+ +GY++ +++E GE AGIK
Sbjct: 62 LLSGEADGNDAYLEIHAGAGGTEAQDWASMLARMYYRWAESKGYKLEMLEESDGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
T K+ G A+G+ K EVGVHRLVRISP+DS RRHTSF++V V P D ++I +
Sbjct: 122 SVTYKITGHNAYGWLKNEVGVHRLVRISPYDSSARRHTSFSSVWVYPVI-DDDIEIEILD 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
DLR++ +R+ GAGGQH N TDSAVRI HIPTGI A CQN+RSQH+N+ +AM +L++R+
Sbjct: 181 KDLRVDTYRASGAGGQHVNRTDSAVRITHIPTGIVAQCQNDRSQHKNRDTAMKMLKARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLD 434
+ E+ ++ S TDI WG+QIR+YVL PY+M+KDLRT E SD VL GDLD
Sbjct: 241 EAELQKREAEAQAVEDSKTDIGWGHQIRSYVLQPYQMIKDLRTGTETSDTQGVLNGDLD 299
>gi|375010251|ref|YP_004983884.1| peptide chain release factor 2 [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|359289100|gb|AEV20784.1| Peptide chain release factor 2 [Geobacillus thermoleovorans
CCB_US3_UF5]
Length = 327
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 150/324 (46%), Positives = 209/324 (64%), Gaps = 1/324 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
PN WDD A + E +L ++E + E+ +L +EE D EL+ E +E
Sbjct: 4 PNFWDDQKAAQAVISEVNALKDLVEEFSSLEERFDNLEVTYELLKEEPDDELQAELVEEA 63
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
+ + E EL LL+ D + +E+ GAGGTES DWASM+L+MY WA+++G++V
Sbjct: 64 KKLMKDFSEFELQLLLNEPYDQNNAILELHPGAGGTESQDWASMLLRMYTRWAEKKGFKV 123
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
+D +PGE AGIK T+ + G A+GY KAE GVHRLVRISPFD+ RRHTSF + V+
Sbjct: 124 ETLDYLPGEEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSCEVV 183
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D + ++I +L+I+ +RS GAGGQH NTTDSAVRI H+PTGI TCQ+ERSQ +
Sbjct: 184 PEM-DDNIEIEIRPEELKIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVVTCQSERSQIK 242
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
N+ AM +L++++ Q ++ Q AE +I WGNQIR+YV HPY +VKD RTN E
Sbjct: 243 NREKAMNMLKAKLYQKKLEEQQAELAELRGEQKEIGWGNQIRSYVFHPYSLVKDHRTNVE 302
Query: 422 VSDPDSVLEGDLDGFILSYLSASL 445
V + +V++G++D FI +YL A L
Sbjct: 303 VGNVQAVMDGEIDVFIDAYLRAKL 326
>gi|291287317|ref|YP_003504133.1| peptide chain release factor 2 [Denitrovibrio acetiphilus DSM
12809]
gi|290884477|gb|ADD68177.1| peptide chain release factor 2 [Denitrovibrio acetiphilus DSM
12809]
Length = 371
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 159/341 (46%), Positives = 227/341 (66%), Gaps = 21/341 (6%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQE------LLEHID-MIKLARE-END 170
++ PN W+ S+E LM + K +E LLE + +I+L +E E
Sbjct: 41 MSDPNFWN--------SKESKVLMKEQAINKKKLEEWHELTGLLEDTEVLIELYKEGEQG 92
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
E ++E+ ++ T+ + EL +LSG+ D + I + +GAGGTE+ DWA+M+ +MY
Sbjct: 93 VEADIET--SIRTLEKTIAHFELKLVLSGQNDGNNAIITINSGAGGTEANDWAAMLYRMY 150
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
+A+R GY+ ++D M GE AGIK ATI + G + +GY K E GVHRLVRISP+DS R
Sbjct: 151 THYAERNGYKCDILDYMEGEEAGIKNATINIKGAFTYGYLKGETGVHRLVRISPYDSANR 210
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSFAAV V+P D + I+E+DL I+ +R+ GAGGQH NTTDSAVRI H+PTG
Sbjct: 211 RHTSFAAVFVMPEIEDDIE-IDISEADLHIDTYRASGAGGQHVNTTDSAVRITHVPTGTV 269
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
TCQ+ERSQH+NKA AM +L+SR+ +LEI ++ + + + T+I WGNQIR+YV+HPY
Sbjct: 270 VTCQSERSQHKNKAHAMKILKSRLYELEIDKKNEEKQKLESTKTEIGWGNQIRSYVMHPY 329
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYL--SASLDKDE 449
+MVKDLRT +E + D+V++G+LD FI +YL +A ++ DE
Sbjct: 330 KMVKDLRTRHETGNVDAVMDGNLDAFIRAYLLHTAGINTDE 370
>gi|194246500|ref|YP_002004139.1| peptide chain release factor 2 [Candidatus Phytoplasma mali]
gi|193806857|emb|CAP18286.1| peptide chain release factor 2 (RF-2) [Candidatus Phytoplasma mali]
Length = 363
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 143/336 (42%), Positives = 228/336 (67%), Gaps = 5/336 (1%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL L+ +N N W++ A +I++E SL K+ +++ F +E + + ++K+ +E D
Sbjct: 32 RLKDLNHLINLSNFWENFEKAKKINQEFKSLNEKIYKMQKFHEEYRDLLSLLKITKENTD 91
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
L LE + LL++++ ++ E++ LL+ D + + + GAGG ES DW M+L+MY
Sbjct: 92 DFLFLE--QTLLSLKKNIQDFEINILLNQTYDKKNAILILHPGAGGIESQDWCEMLLRMY 149
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
+ +AQ++ +++ ++D G++AG+K ++ + G YA+GY K+E GVHRLVRISPFDS +
Sbjct: 150 QKYAQKKNFKIVVLDYQVGDVAGLKSVSLLIKGVYAYGYLKSEKGVHRLVRISPFDSNSK 209
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSF + V+P + + ++I E +L+I+ FRS GAGGQH NTTDSAVR+ H+PT I
Sbjct: 210 RHTSFTSCDVLPEINE-NIEIKIKEEELKIDVFRSSGAGGQHVNTTDSAVRLTHLPTNIV 268
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSL-TDISWGNQIRTYVLHP 409
CQNERSQ +NK A+ +L++++ Q EI +Q ++N + Q + +ISWGNQIR+Y+ HP
Sbjct: 269 INCQNERSQTRNKERALQILKTKLFQREIKKQ-EINLKLIQGVQKEISWGNQIRSYIFHP 327
Query: 410 YRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
Y++VKD RTN E +SV++GDLD FI S+L ++
Sbjct: 328 YQLVKDHRTNVESYQIESVIDGDLDLFISSFLKKNI 363
>gi|438690392|emb|CCP49649.1| peptide chain release factor 2 [Chlamydia trachomatis A/7249]
gi|438691477|emb|CCP48751.1| peptide chain release factor 2 [Chlamydia trachomatis A/5291]
gi|438692850|emb|CCP47852.1| peptide chain release factor 2 [Chlamydia trachomatis A/363]
gi|440525381|emb|CCP50632.1| peptide chain release factor 2 [Chlamydia trachomatis K/SotonK1]
gi|440528058|emb|CCP53542.1| peptide chain release factor 2 [Chlamydia trachomatis D/SotonD5]
gi|440528948|emb|CCP54432.1| peptide chain release factor 2 [Chlamydia trachomatis D/SotonD6]
gi|440532523|emb|CCP58033.1| peptide chain release factor 2 [Chlamydia trachomatis G/SotonG1]
gi|440533416|emb|CCP58926.1| peptide chain release factor 2 [Chlamydia trachomatis Ia/SotonIa1]
gi|440534310|emb|CCP59820.1| peptide chain release factor 2 [Chlamydia trachomatis Ia/SotonIa3]
Length = 329
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 153/323 (47%), Positives = 207/323 (64%), Gaps = 10/323 (3%)
Query: 124 LWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREE----NDTELELESLE 179
WDD V AG+IS L ++ E EL + I+ E+ D E++ E +
Sbjct: 5 FWDDVVRAGKISERIARLKQQLSEF----NELKNKVSAIQFFLEDEESSKDLEMQKELEK 60
Query: 180 ALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGY 239
+ +K E E LLSGELD SC++ + AGAGGTES DW M+L+MY WA +
Sbjct: 61 EFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMLLRMYMRWASSHSW 120
Query: 240 RVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVA 299
R+ ++D + GE+AGIK T+K+ GEYA+GYAKAE GVHRLVRISPFDS +RHTSFA+V
Sbjct: 121 RIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHTSFASVE 180
Query: 300 VIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQ 359
V P D V+I D+RI+ +RS GAGGQH N TDSAVRI H PTGI +CQNERSQ
Sbjct: 181 VFPEI-DDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSCQNERSQ 239
Query: 360 HQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTN 419
QN+ + M +L++R+ Q + + + ++ +ISWG+QIR YV PY +VKD+RT
Sbjct: 240 IQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGSQIRNYVFQPYTLVKDVRTG 299
Query: 420 YEVSDPDSVLEGD-LDGFILSYL 441
YEV + ++++G+ LD FI +YL
Sbjct: 300 YEVGNIQAMMDGELLDAFIKAYL 322
>gi|403746666|ref|ZP_10955059.1| hypothetical protein URH17368_2375 [Alicyclobacillus hesperidum
URH17-3-68]
gi|403120525|gb|EJY54897.1| hypothetical protein URH17368_2375 [Alicyclobacillus hesperidum
URH17-3-68]
Length = 340
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 157/338 (46%), Positives = 219/338 (64%), Gaps = 12/338 (3%)
Query: 119 LNKPNLWDDPVHAGRISREHGSL---MGKMKEVKAFEQELLEHIDM---IKLAREENDTE 172
+ +PN WDD A +I E +L + KM E+ + H D ++LA+EEND +
Sbjct: 1 MAEPNFWDDQEKAQKIIGEMNALKSVVDKMNELTSL------HADAEVALQLAQEENDMD 54
Query: 173 LELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKS 232
L E+ E ++ EL +LSG+ D + +E+ GAGGTES DWAS++L+MY
Sbjct: 55 LFAEANEMATKLKDGIDSFELQLMLSGDYDANNAIVELHPGAGGTESQDWASILLRMYTR 114
Query: 233 WAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRH 292
WA+ GY+V ++D +PG+ AGIK T+++ G A+GY KAE GVHRLVRISPFD+ RRH
Sbjct: 115 WAEDHGYKVEVLDYLPGDEAGIKSVTLRIKGHNAYGYLKAEKGVHRLVRISPFDASGRRH 174
Query: 293 TSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITAT 352
TSFA+V VIP + T ++I +LRI+ +RS GAGGQH NTTDSAVRI H+PTGI +
Sbjct: 175 TSFASVDVIPEIAEDDTSIEIRPEELRIDTYRSTGAGGQHVNTTDSAVRITHLPTGIVVS 234
Query: 353 CQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRM 412
CQ+ERSQ QN+A AM +L++R+ + AE +I+WG+QIR+YV HPY +
Sbjct: 235 CQSERSQIQNRAVAMELLKARLAAKRQEEREAELAELRGEQKEIAWGSQIRSYVFHPYSL 294
Query: 413 VKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKDEG 450
VKD RTN EV + +V++G LD FI +YL L +++
Sbjct: 295 VKDHRTNQEVGNVQAVVDGLLDPFIHAYLRWQLAREQA 332
>gi|379008496|ref|YP_005257947.1| peptide chain release factor 2 [Sulfobacillus acidophilus DSM
10332]
gi|361054758|gb|AEW06275.1| peptide chain release factor 2 [Sulfobacillus acidophilus DSM
10332]
Length = 376
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 145/329 (44%), Positives = 218/329 (66%), Gaps = 1/329 (0%)
Query: 115 LSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELE 174
L + + +P+ W+DP A RI+R+ + G + E + + E + ++LA E D +L
Sbjct: 36 LESVMAEPDFWNDPKRAERITRQLHIVTGPLTEYETLVRRFQEWQEFVELANAEGDQDLL 95
Query: 175 LESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWA 234
+ L+ + + EL+ +L G D + + +GAGGTE+ DW M+L+MY WA
Sbjct: 96 RQQLKEAEQLAAALRHLELELILRGPYDHEDAILTLHSGAGGTEAQDWVQMLLRMYLRWA 155
Query: 235 QRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTS 294
+RRG+R ++D++PGE AG+K T++V GE AFG+ + E GVHRLVRISPFD+ RRHTS
Sbjct: 156 ERRGFRTQIIDQLPGEEAGLKSVTVEVHGENAFGFLRPERGVHRLVRISPFDASGRRHTS 215
Query: 295 FAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQ 354
FA+V V+P+ +S V+I +LRI+ FR+ GAGGQH N T+SAVRI H+PTGI TCQ
Sbjct: 216 FASVEVVPDI-ESDEAVEIRPEELRIDTFRASGAGGQHINKTESAVRITHLPTGIVVTCQ 274
Query: 355 NERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVK 414
+ERSQH N+ +AM +L+ ++ +L+ Q AE + +I WG+QIR+YV PY +V+
Sbjct: 275 SERSQHANRETAMRLLRGKLAELKEREWEQKMAEMRGAQAEIGWGSQIRSYVFQPYTVVR 334
Query: 415 DLRTNYEVSDPDSVLEGDLDGFILSYLSA 443
D RT +E+ + D+V++G++DGFI +YL A
Sbjct: 335 DHRTRFEMGNVDAVMDGEIDGFIEAYLQA 363
>gi|381150409|ref|ZP_09862278.1| peptide chain release factor 2 [Methylomicrobium album BG8]
gi|380882381|gb|EIC28258.1| peptide chain release factor 2 [Methylomicrobium album BG8]
Length = 365
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 156/369 (42%), Positives = 235/369 (63%), Gaps = 20/369 (5%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
K A + + + ++ L + + RL + EL P +WD+P A + +E G L +
Sbjct: 8 KYKIADLRERTESLRGYLDFDTKSERLVEVLRELENPKIWDNPEQAQALGKERGQLEMVV 67
Query: 146 KEVKAFEQELLEHIDMIKLAREEND--------TELE-LESLEALLTMRRKSKEKELDAL 196
+ L + +++ +A EE D ++LE LES A L RR +
Sbjct: 68 NTINELTSGLNDAEELLAMAVEEGDADTVDTVASDLEHLESQVATLEFRR---------M 118
Query: 197 LSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKR 256
+GE+DP + ++++QAG+GGTE+ DWASM+ +MY W + +G++ L++E PG++AGIK
Sbjct: 119 FAGEMDPNNAFLDIQAGSGGTEAQDWASMIERMYLRWGESKGFKTELIEESPGDVAGIKS 178
Query: 257 ATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINES 316
ATIK +G+YAFG+ + E GVHRLVR SPFDSG RRHTSFA+V V P D + ++IN +
Sbjct: 179 ATIKFEGDYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFASVFVSPEV-DDNIAIEINPA 237
Query: 317 DLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQ 376
DLRI+ +R+ GAGGQH N T+SAVRI H P+GI CQ++RSQH+NK +AM L++++ +
Sbjct: 238 DLRIDVYRASGAGGQHINRTESAVRITHNPSGIVVQCQSDRSQHKNKDTAMKQLKAKLYE 297
Query: 377 LEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGF 436
LE+ ++++ S +DI WG+QIR+YVL R +KDLRT E +P +VL+G+LD F
Sbjct: 298 LEMMKRSETQQALEDSKSDIGWGSQIRSYVLDQSR-IKDLRTGVETGNPQAVLDGNLDMF 356
Query: 437 ILSYLSASL 445
I + L + L
Sbjct: 357 IEASLKSGL 365
>gi|152991276|ref|YP_001356998.1| peptide chain release factor 2 [Nitratiruptor sp. SB155-2]
gi|166225114|sp|A6Q582.1|RF2_NITSB RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|151423137|dbj|BAF70641.1| peptide chain release factor 2 [Nitratiruptor sp. SB155-2]
Length = 368
Score = 300 bits (769), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 155/359 (43%), Positives = 225/359 (62%), Gaps = 7/359 (1%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
+ Q I+ IK ++ + RL + N P+ W+D AG I +E L +++ +
Sbjct: 13 LEQKIENIKNIIKPDLITKRLKEIEQLENSPDFWNDAKKAGEIQKEKNRLSRILEKFEEA 72
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
+ + D+ ++A EE DTE E T+ K + E++ +LSGE D + + +
Sbjct: 73 RSSVEDAKDLFEMATEEEDTETLNMLFEEAPTLEEKVNKIEIETMLSGENDDKNAIVTIH 132
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
GAGGTES DWAS++ +MY WA+R G++V ++D GE AGIK + + GE A+GY K
Sbjct: 133 PGAGGTESQDWASILYRMYLRWAERHGFKVEVLDYQEGEEAGIKDVSFIIKGENAYGYLK 192
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
AE G+HRLVRISPFDS RRHTSFA+V V P D ++ I + D+R++ +R+ GAGGQ
Sbjct: 193 AENGIHRLVRISPFDSNARRHTSFASVMVSPEV-DDDINIVIEDKDIRVDTYRASGAGGQ 251
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI--ARQAQMNAEH 389
H N TDSA+RI HIPTGI CQN+RSQH+N+A+AM +L+SR+ +LE+ R Q E
Sbjct: 252 HVNKTDSAIRITHIPTGIVVQCQNDRSQHKNRATAMKMLKSRLYELELEKKRAEQEGIEK 311
Query: 390 TQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKD 448
+DI WG+QIR+YVL PY+ VKD R+N S+ +++L+GD+D I L A +K+
Sbjct: 312 ----SDIGWGHQIRSYVLAPYQQVKDTRSNKAYSNVEAILDGDIDKIIEDVLIAEAEKE 366
>gi|374620324|ref|ZP_09692858.1| bacterial peptide chain release factor 2 (bRF-2) [gamma
proteobacterium HIMB55]
gi|374303551|gb|EHQ57735.1| bacterial peptide chain release factor 2 (bRF-2) [gamma
proteobacterium HIMB55]
Length = 347
Score = 300 bits (769), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 150/335 (44%), Positives = 219/335 (65%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL + EL +P++W+DP A + RE SL + ++A + + +D++++A+ E+D
Sbjct: 15 RLAEVELELGEPSVWEDPERAQSLGRERSSLELVVHTIEALDAGHQDGVDLLEMAQAEDD 74
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
E E L + + + E + SGE+DP + ++++QAG+GGTE+ DWA M+L+MY
Sbjct: 75 QETADEVANDLEKLMAQLETLEFRRMFSGEMDPNNAFLDIQAGSGGTEAQDWAEMLLRMY 134
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
W + +G++ TL + G++AGIK AT++ GEYAFG+ + E GVHRLVR SPFDSG R
Sbjct: 135 LRWGESKGFKTTLTEASAGDVAGIKSATVQFQGEYAFGWLRTETGVHRLVRKSPFDSGGR 194
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSF++V V P D + + IN +DLRI+ +RS GAGGQH NTTDSAVRI H P+G
Sbjct: 195 RHTSFSSVFVSPEI-DDNIEIDINPADLRIDTYRSSGAGGQHVNTTDSAVRITHEPSGTV 253
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
+CQ ERSQHQNK +AM L++++ +LE+ +++ S DI WG+QIR+YVL
Sbjct: 254 TSCQTERSQHQNKDNAMKQLRAKLYELEMLKRSAEKQAMEDSKADIGWGSQIRSYVLDDS 313
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E + +VL+G LD FI + L L
Sbjct: 314 R-IKDLRTGVENRNTQAVLDGALDPFIEASLKKGL 347
>gi|410694058|ref|YP_003624680.1| Peptide chain release factor 2 (RF-2) [Thiomonas sp. 3As]
gi|294340483|emb|CAZ88864.1| Peptide chain release factor 2 (RF-2) [Thiomonas sp. 3As]
Length = 331
Score = 300 bits (769), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 154/334 (46%), Positives = 222/334 (66%), Gaps = 8/334 (2%)
Query: 115 LSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELE 174
++ L P +W+DP A + RE SL + +++ L +H ++ +++REE D +
Sbjct: 3 VAGALEDPQVWNDPKRAQELGRERKSLETVVLGLESLTTALADHSELFEMSREEGD-DAT 61
Query: 175 LESLEALLTMRRKSKEK-ELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSW 233
E++EA + E E + S LDP +C+I++QAGAGGTE+ DWASM+L+ Y +
Sbjct: 62 CEAIEADVEKSADEVEALEFRRMFSNPLDPSNCFIDIQAGAGGTEACDWASMLLRQYLRY 121
Query: 234 AQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHT 293
+R+G++ +M+E G++AGI+ ATIKV+G+YA+G + E GVHRLVR SPFDS RHT
Sbjct: 122 CERKGFKTEVMEETEGDVAGIRSATIKVEGDYAYGQLRTETGVHRLVRKSPFDSSGGRHT 181
Query: 294 SFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATC 353
SFA+V V P D S + IN +D+R + FR+ GAGGQH N TDSAVR+ HIPTGI C
Sbjct: 182 SFASVFVYPEV-DDSIEIDINPADVRTDTFRASGAGGQHINKTDSAVRLTHIPTGIVVQC 240
Query: 354 QNERSQHQNKASAMGVLQSRVNQLEIARQ--AQMNAEHTQSLTDISWGNQIRTYVLHPYR 411
QN+RSQH+N+A A +L+SR+ + E+ ++ Q E T+S D+ WG+QIR+YVL R
Sbjct: 241 QNDRSQHKNRAEAWQMLRSRLYEHEMRKRMAEQQTLESTKS--DVGWGHQIRSYVLDQSR 298
Query: 412 MVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+KDLRTN E+S+ VL+GDLD FI + L + L
Sbjct: 299 -IKDLRTNVEISNTQKVLDGDLDEFITASLKSGL 331
>gi|357590811|ref|ZP_09129477.1| peptide chain release factor 2 [Corynebacterium nuruki S6-4]
Length = 374
Score = 300 bits (769), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 160/353 (45%), Positives = 228/353 (64%), Gaps = 13/353 (3%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
I ++ I+K L L+ ++ L A+ + P+LWDDP HA +++ + + G++K+V+
Sbjct: 12 IDSTLTTIEKVLDLDELDAQVRELEAQASDPSLWDDPDHAQQVTSKLSHVQGRLKKVRGL 71
Query: 152 EQELLEHIDMIKLAREENDTELELESLE----ALLTMRRKSKEKELDALLSGELDPCSCY 207
L + M ++A EE++ E E+ E L ++ E+ +LSGE D
Sbjct: 72 RSRLDDLPVMYEMA-EESEGEDAAEAKELADAELAELKEAVDSLEVTTMLSGEYDDREAV 130
Query: 208 IEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAF 267
+ +++ AGG ++ DWA M+++MY WA++ G++V + D E AGIK AT V G+Y +
Sbjct: 131 VNIRSAAGGVDAADWAEMLMRMYTRWAEKHGHKVEVYDISYAEEAGIKSATFVVHGDYMY 190
Query: 268 GYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGG 327
G E G HRLVRISPFD+ RR TSFA V V+P + S HV I+E+++R++ +RS G
Sbjct: 191 GTLSVEQGTHRLVRISPFDNQGRRQTSFAEVEVLPVV-EQSDHVDIDENEVRVDVYRSSG 249
Query: 328 AGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ---AQ 384
GGQ NTTDSAVR+ HIPTGI TCQNE+SQ QNKASAM VL +++ LE RQ A+
Sbjct: 250 PGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLAAKL--LERKRQEEAAE 307
Query: 385 MNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
M+A SWGNQ+R+YVLHPY+MVKDLRTNYEV+DP VL+GD+DGF+
Sbjct: 308 MDALRGDGSN--SWGNQMRSYVLHPYQMVKDLRTNYEVNDPQKVLDGDIDGFL 358
>gi|339627122|ref|YP_004718765.1| peptide chain release factor 2 [Sulfobacillus acidophilus TPY]
gi|339284911|gb|AEJ39022.1| peptide chain release factor 2 [Sulfobacillus acidophilus TPY]
Length = 337
Score = 300 bits (769), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 144/325 (44%), Positives = 216/325 (66%), Gaps = 1/325 (0%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
+ +P+ W+DP A RI+R+ + G + E + + E + ++LA E D +L + L
Sbjct: 1 MAEPDFWNDPKRAERITRQLHIVTGPLTEYETLVRRFQEWQEFVELANAEGDQDLLRQQL 60
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
+ + + EL+ +L G D + + +GAGGTE+ DW M+L+MY WA+RRG
Sbjct: 61 KEAEQLAAALRHLELELILRGPYDHEDAILTLHSGAGGTEAQDWVQMLLRMYLRWAERRG 120
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
+R ++D++PGE AG+K T++V GE AFG+ + E GVHRLVRISPFD+ RRHTSFA+V
Sbjct: 121 FRTQIIDQLPGEEAGLKSVTVEVHGENAFGFLRPERGVHRLVRISPFDASGRRHTSFASV 180
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
V+P+ +S V+I +LRI+ FR+ GAGGQH N T+SAVRI H+PTGI TCQ+ERS
Sbjct: 181 EVVPDI-ESDEAVEIRPEELRIDTFRASGAGGQHINKTESAVRITHLPTGIVVTCQSERS 239
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
QH N+ +AM +L+ ++ +L+ Q AE + +I WG+QIR+YV PY +V+D RT
Sbjct: 240 QHANRETAMRLLRGKLAELKEREWEQKMAEMRGAQAEIGWGSQIRSYVFQPYTVVRDHRT 299
Query: 419 NYEVSDPDSVLEGDLDGFILSYLSA 443
+E+ + D+V++G++DGFI +YL A
Sbjct: 300 RFEMGNVDAVMDGEIDGFIEAYLQA 324
>gi|374587319|ref|ZP_09660411.1| bacterial peptide chain release factor 2 (bRF-2) [Leptonema illini
DSM 21528]
gi|373876180|gb|EHQ08174.1| bacterial peptide chain release factor 2 (bRF-2) [Leptonema illini
DSM 21528]
Length = 391
Score = 300 bits (769), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 156/335 (46%), Positives = 215/335 (64%), Gaps = 2/335 (0%)
Query: 108 LNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLARE 167
L V L+ + +++P+ WDD A ISR+ +L K + +E+ + D+I L +
Sbjct: 41 LRVELSDMENRMSQPDFWDDADQAREISRQKSALEKKTEPWVELRREVDDFGDLIALTID 100
Query: 168 ENDTELELESL-EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMV 226
E E SL + M+ + +L L GE D + + + +GAGGTES DWA M+
Sbjct: 101 ELGEEEGFASLSKDFARMKEQFDGLQLSEALLGEDDGRNALVTISSGAGGTESQDWAQML 160
Query: 227 LQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFD 286
+MY W ++RGY V +D + AGIK A++ V GE AFGY K E GVHRLVRISPFD
Sbjct: 161 YRMYTRWFEKRGYDVETLDFQEADEAGIKSASLLVKGENAFGYLKGENGVHRLVRISPFD 220
Query: 287 SGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIP 346
S KRRHTSFA+V + P D S +V I E DLR++ +R+ GAGGQH N TDSA+RI HIP
Sbjct: 221 SNKRRHTSFASVHISPEL-DDSVNVLIEEKDLRVDTYRASGAGGQHVNKTDSAIRITHIP 279
Query: 347 TGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYV 406
TGI CQNERSQH+N+ AM +L++R+ ++E A++ D++WG+QIR+YV
Sbjct: 280 TGIVVQCQNERSQHKNRDRAMKMLKARLYEVEKAKKEAEAESKAGEKKDVAWGSQIRSYV 339
Query: 407 LHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
+HPY+MVKDLRT + SD +SV+ GDLD F++SYL
Sbjct: 340 MHPYKMVKDLRTGEQTSDVESVMNGDLDPFVISYL 374
>gi|238787318|ref|ZP_04631117.1| Peptide chain release factor 2 [Yersinia frederiksenii ATCC 33641]
gi|238724580|gb|EEQ16221.1| Peptide chain release factor 2 [Yersinia frederiksenii ATCC 33641]
Length = 347
Score = 300 bits (769), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 148/335 (44%), Positives = 222/335 (66%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++AEL +P++W++P A + +E +L + + +Q + + +++LA E +D
Sbjct: 15 RLEEVNAELEQPDVWNEPERAQALGKERSALEEIVTTIDQLDQGMEDVSGLLELAIEADD 74
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
E E++ L + K + E + SGE D +CY+++QAG+GGTE+ DWASM+L+MY
Sbjct: 75 EETFNEAVAELDILDGKLGQLEFRRMFSGEYDSANCYLDLQAGSGGTEAQDWASMLLRMY 134
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA+ +G++ +++E G++AG+K ATIK+ G+YAFG+ + E GVHRLVR SPFDSG R
Sbjct: 135 LRWAEAKGFKTEIIEESDGDVAGLKSATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGR 194
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSF++ V P D ++IN +DLRI+ +R+ GAGGQH N T+SAVRI HIPT I
Sbjct: 195 RHTSFSSAFVYPEV-DDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIV 253
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+NK AM L++++ + E+ ++ + +DI WG+QIR+YVL
Sbjct: 254 TQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNADKQVLEDNKSDIGWGSQIRSYVLDDS 313
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E + +VL+GDLD FI + L A L
Sbjct: 314 R-IKDLRTGVETRNTQAVLDGDLDKFIEASLKAGL 347
>gi|212710038|ref|ZP_03318166.1| hypothetical protein PROVALCAL_01091 [Providencia alcalifaciens DSM
30120]
gi|212687245|gb|EEB46773.1| hypothetical protein PROVALCAL_01091 [Providencia alcalifaciens DSM
30120]
Length = 329
Score = 300 bits (768), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 146/331 (44%), Positives = 222/331 (67%), Gaps = 2/331 (0%)
Query: 115 LSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELE 174
++AEL +P++W++P A + +E SL ++ + Q + + +++LA E +D E
Sbjct: 1 MNAELEQPDVWNEPERAQALGKERSSLEAIVETIDQLTQGIEDVEGLLELAVEADDEETF 60
Query: 175 LESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWA 234
E+ L ++ K ++ E + SGE D CYI++QAG+GGTE+ DWASM+++MY WA
Sbjct: 61 NEAGAELDALQGKLEQLEFRRMFSGEYDSADCYIDLQAGSGGTEAQDWASMLMRMYLRWA 120
Query: 235 QRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTS 294
+ +G++ +++E G++AG+K ATIK+ G+YA+G+ + E GVHRLVR SPFDSG RRHTS
Sbjct: 121 ESKGFKTEIIEESDGDVAGLKSATIKIIGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTS 180
Query: 295 FAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQ 354
F++ + P D ++IN +DLRI+ +R+ GAGGQH N T+SAVRI HIPT I CQ
Sbjct: 181 FSSAFIYPEV-DDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTNIVTQCQ 239
Query: 355 NERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVK 414
N+RSQH+NK AM L++++ +LE+ ++ ++ +DI WG+QIR+YVL R +K
Sbjct: 240 NDRSQHKNKDQAMRQLKAKLYELEMQKKNADKQAMEENKSDIGWGSQIRSYVLDDAR-IK 298
Query: 415 DLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
DLRT E + +VL+GDLD FI + L A L
Sbjct: 299 DLRTGVETRNTQAVLDGDLDKFIEASLKAGL 329
>gi|441503674|ref|ZP_20985676.1| Peptide chain release factor 2 [Photobacterium sp. AK15]
gi|441428750|gb|ELR66210.1| Peptide chain release factor 2 [Photobacterium sp. AK15]
Length = 353
Score = 300 bits (768), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 148/335 (44%), Positives = 221/335 (65%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++AEL +P++W++P A + +E +L + + +Q + + +++LA EEND
Sbjct: 21 RLEEVNAELEQPDVWNEPERAQALGKERAALEAVVDTIDQLDQGVEDVDGLLELAIEEND 80
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
E E L + K ++ E + SG+ D CYI++QAG+GGTE+ DW SM+L+MY
Sbjct: 81 QETFDEIEPELAELETKLEKLEFRRMFSGDHDESDCYIDLQAGSGGTEAQDWTSMMLRMY 140
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA+ +G++ +++ GE+AG+K AT+++ GEYA+G+ + E GVHRLVR SPFDSG R
Sbjct: 141 LRWAEAKGFKTEVIEVSEGEVAGLKSATVRISGEYAYGWLRTETGVHRLVRKSPFDSGGR 200
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSFA+ + P D + + IN SDLRI+ +R+ GAGGQH NTT+SAVRI H+PT
Sbjct: 201 RHTSFASAFIYPEV-DDNIDIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHLPTNTV 259
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+NK AM L++++ +LE+ +Q + + +DI WG+QIR+YVL
Sbjct: 260 VQCQNDRSQHKNKDQAMKQLKAKLFELEMQKQNAEKQANEDAKSDIGWGSQIRSYVLDDS 319
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E + +VL+GDLD FI + L + L
Sbjct: 320 R-IKDLRTGVENRNTQAVLDGDLDRFIEASLKSGL 353
>gi|118590063|ref|ZP_01547467.1| peptide chain release factor 2 [Stappia aggregata IAM 12614]
gi|118437560|gb|EAV44197.1| peptide chain release factor 2 [Stappia aggregata IAM 12614]
Length = 322
Score = 300 bits (768), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 151/307 (49%), Positives = 217/307 (70%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + +K+ EQ+L ++I++I+L E+D + ++ EAL ++ K + +L++
Sbjct: 2 RERQQLDDSISGIKSLEQDLSDNIELIELGEMEDDKSVVADAEEALRGLKGKVNQLQLNS 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+E+ +GAGGTES DWASM+L+MY+ WA++ G++V +++ GE AGIK
Sbjct: 62 LLSGEADANDTYLEINSGAGGTESQDWASMLLRMYRRWAEKHGFKVEVLEYHDGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
AT+ + GE A+G+ K E GVHRLVRISP+DS RRHTSF++ V P D S + INE
Sbjct: 122 SATLLIKGENAYGWLKTESGVHRLVRISPYDSNARRHTSFSSAWVYP-VIDDSIDIDINE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD RI+ +R+ GAGGQH NTTDSAVRI H PTGI CQ+ERSQH+N+A+A +L++R+
Sbjct: 181 SDCRIDTYRASGAGGQHVNTTDSAVRITHQPTGIVVQCQSERSQHKNRATAWSMLKARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ ++ + + S TDI WG+QIR+YVL PY++VKDLRT E + P VL+GDLD
Sbjct: 241 EAELKKREEAASAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTSPGDVLDGDLDE 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMEAALA 307
>gi|325981471|ref|YP_004293873.1| hypothetical protein NAL212_0774 [Nitrosomonas sp. AL212]
gi|325530990|gb|ADZ25711.1| hypothetical protein NAL212_0774 [Nitrosomonas sp. AL212]
Length = 368
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 153/352 (43%), Positives = 230/352 (65%), Gaps = 20/352 (5%)
Query: 99 IKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEH 158
+++ L + + RLN L+ L +W D I RE SL + + + E++L +
Sbjct: 23 LRRFLDFDSKQTRLNELTRLLEDSTVWSDSKRTQEIGREKKSLEDTVVTLVSMEKQLGDA 82
Query: 159 IDMIKLAREEND------TELELESLE---ALLTMRRKSKEKELDALLSGELDPCSCYIE 209
++ ++A++E D L+ E++E A L RR + SG +D +C+++
Sbjct: 83 KELFQIAKDEADEAALVSISLDAENIEKAIANLEFRR---------MFSGPMDSNNCFVD 133
Query: 210 VQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGY 269
+Q+G+GGTE+ DWA+M+ +MY + +R+G+ V +++E PG+IAGIK AT+K+ GEYA+G+
Sbjct: 134 IQSGSGGTEAQDWAAMLERMYLRYCERQGFDVEILEESPGDIAGIKSATLKISGEYAYGF 193
Query: 270 AKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAG 329
+ E GVHRLVR SPFDSG RRHTSF++V V P D S ++IN +DLRI+ FR+ GAG
Sbjct: 194 LRTETGVHRLVRKSPFDSGNRRHTSFSSVFVYPEV-DDSIEIEINPADLRIDTFRASGAG 252
Query: 330 GQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEH 389
GQH N TDSA+RI H PTGI CQ+ RSQH+NKA A+ +L+SR+ + E+ ++ +
Sbjct: 253 GQHINKTDSAIRITHNPTGIVVQCQSGRSQHRNKADALTMLKSRLFEAELRKRNEEKQAI 312
Query: 390 TQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
++ TDI WG+QIR+YVL R +KDLRTN EV + +VL+GDL+ FI + L
Sbjct: 313 EENKTDIGWGHQIRSYVLDQSR-IKDLRTNVEVGNTQNVLDGDLNSFIEASL 363
>gi|213965439|ref|ZP_03393634.1| peptide chain release factor 2 [Corynebacterium amycolatum SK46]
gi|213951823|gb|EEB63210.1| peptide chain release factor 2 [Corynebacterium amycolatum SK46]
Length = 370
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 165/347 (47%), Positives = 226/347 (65%), Gaps = 10/347 (2%)
Query: 95 SIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQE 154
++ I+K + L+ R+ L A+ P+LWDDP HA +++ KMK++ +
Sbjct: 15 TLTTIEKVVDVDELSDRIRELEAQAADPSLWDDPDHAQQVTSALSQAQAKMKKIDSLRGR 74
Query: 155 LLEHIDMIKLAREENDTE-LELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAG 213
L + M +LA EE+D++ +E+ E +R + E+ +LSG D I +++G
Sbjct: 75 LDDLSVMYELAEEESDSDAVEMADAERA-ELRAAIESLEVTTMLSGPYDEREAVINIRSG 133
Query: 214 AGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAE 273
AGG ++ DWA M+++MY WA + G++V + D E AGIK AT V GEY +G E
Sbjct: 134 AGGVDAADWAEMLMRMYLRWADKHGHKVEVYDTSYAEEAGIKSATFVVHGEYMYGTLSVE 193
Query: 274 VGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHA 333
G HRLVRISPFD+ RR TSFA V V+P + H+ I ESDLRI+ +RS G GGQ
Sbjct: 194 QGAHRLVRISPFDNQGRRQTSFAEVEVLPVVE-ETDHIDIPESDLRIDVYRSSGPGGQSV 252
Query: 334 NTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ---AQMNAEHT 390
NTTDSAVR+ H+PTGI TCQNE+SQHQNKASAM VLQ+++ LE RQ A+++A
Sbjct: 253 NTTDSAVRLTHVPTGIVVTCQNEKSQHQNKASAMRVLQAKL--LEKKRQEERAELDA--L 308
Query: 391 QSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
+ + SWGNQ+R+YVLHPY+MVKDLRT YEV++P SVL+GDLDGFI
Sbjct: 309 GAGGNASWGNQMRSYVLHPYQMVKDLRTEYEVNNPQSVLDGDLDGFI 355
>gi|421466491|ref|ZP_15915170.1| peptide chain release factor 2 [Acinetobacter radioresistens
WC-A-157]
gi|400203271|gb|EJO34264.1| peptide chain release factor 2 [Acinetobacter radioresistens
WC-A-157]
Length = 351
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 154/336 (45%), Positives = 221/336 (65%), Gaps = 4/336 (1%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL + EL P++W+D A +++E G L + ++ +L + M+ LA E +D
Sbjct: 19 RLEEVLRELEDPSIWNDQTRAQAMAKEKGELENVINVLEGLSTQLEDAQAMLDLAVEADD 78
Query: 171 TELELESLEALLTMRRKSKEK-ELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
L L ++A L+ ++ K E + S +DP CY+E+QAG+GGTE+ DWASM+L+M
Sbjct: 79 ESL-LADVQAELSSAEEALAKLEFRRMFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRM 137
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y W +R G++ LM+E G++AGIK ATI+V+GEYA+G+ + E GVHRLVR SPFDSG
Sbjct: 138 YMRWIERHGFKAELMEESDGDVAGIKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGN 197
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RRHTSF+AV V P D + + IN SD+R + +R+ GAGGQH N TDSAVR+ H+PTGI
Sbjct: 198 RRHTSFSAVFVSPEV-DDNIEIDINPSDVRTDTYRASGAGGQHINKTDSAVRLTHMPTGI 256
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHP 409
CQN+RSQH N+ A L++++ +LE++++ + S +DI WG+QIR+YVL
Sbjct: 257 VVACQNQRSQHANRDHAWKQLRAKLYELEMSKRNEAAQALEDSKSDIGWGSQIRSYVLDD 316
Query: 410 YRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E S+ +VL+GDLD FI + L L
Sbjct: 317 SR-IKDLRTGVENSNTGAVLDGDLDKFIEASLKQGL 351
>gi|322420980|ref|YP_004200203.1| peptide chain release factor 2 [Geobacter sp. M18]
gi|320127367|gb|ADW14927.1| Peptide chain release factor 2 [Geobacter sp. M18]
Length = 371
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 144/331 (43%), Positives = 211/331 (63%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
R+ L N+P+ W+D +A ++ + ++ + + +++ + ++I+L EE D
Sbjct: 31 RMQELDELTNRPDFWNDAENAQKVLKARTAMEKDVTAWENLDRQARDIRELIELGSEEED 90
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
E + + E +LSG D ++ + +GAGGTES DWA M+L+MY
Sbjct: 91 EATLAEVAAMNAELENGVSQAEFRRMLSGPHDASGAFVSINSGAGGTESQDWAEMLLRMY 150
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
+ +++G+R + D G+ AGIK T GE+A+GY KA+ G+HRLVRISPFDS R
Sbjct: 151 LRYCEKKGWRTEITDYQEGDGAGIKGVTFAATGEFAYGYLKADAGIHRLVRISPFDSSAR 210
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSFA+V V P + V+I ESDLRI+ +RS GAGGQH NTTDSA+RI H+PTGI
Sbjct: 211 RHTSFASVFVFPVIEEEDIEVKIAESDLRIDTYRSSGAGGQHVNTTDSAIRITHLPTGIV 270
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQ+ERSQH NKA+AM VL+S++ ++E+ + ++ +I WG+QIR+YVLHPY
Sbjct: 271 VACQSERSQHMNKATAMKVLRSKLYEMELREREAKASDIAGEKKEIGWGSQIRSYVLHPY 330
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
+MVKDLRT E +PD+VL+G LD F++ +L
Sbjct: 331 KMVKDLRTGVESGNPDAVLDGALDDFVVPFL 361
>gi|319650621|ref|ZP_08004761.1| peptide chain release factor 2 [Bacillus sp. 2_A_57_CT2]
gi|317397802|gb|EFV78500.1| peptide chain release factor 2 [Bacillus sp. 2_A_57_CT2]
Length = 331
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 153/326 (46%), Positives = 209/326 (64%), Gaps = 3/326 (0%)
Query: 121 KPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMI-KLAREENDTELELESLE 179
+P WDD A + E SL ++ E E E++++ +L +EE+D EL+ + E
Sbjct: 3 QPGFWDDQQAAQVVISESNSLKEQVVEFHDL-YETFENLELTYELVKEESDAELQADLEE 61
Query: 180 ALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGY 239
L + ++ + EL LLS E D + +E+ GAGGTES DW SM+L+MY WA+++G+
Sbjct: 62 ELKDLVKRLNDFELQLLLSEEYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKKGF 121
Query: 240 RVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVA 299
+V +D +PG+ AGIK T+ + G A+GY KAE GVHRLVRISPFDS RRHTSF +
Sbjct: 122 KVETLDYLPGDEAGIKSVTLSIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCE 181
Query: 300 VIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQ 359
V+P D + I DL+I+ +R+ GAGGQH NTTDSAVRI H+PT + TCQ ERSQ
Sbjct: 182 VMPEFND-EIEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTNVVVTCQTERSQ 240
Query: 360 HQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTN 419
+N+ AM +LQ+++ Q +I Q AE DI WG+QIR+YV HPY MVKD RTN
Sbjct: 241 IKNRERAMKMLQAKLYQKKIEEQEAELAEIRGEQKDIGWGSQIRSYVFHPYSMVKDHRTN 300
Query: 420 YEVSDPDSVLEGDLDGFILSYLSASL 445
EV + V++GDLD FI +YL + L
Sbjct: 301 TEVGNVQGVMDGDLDMFINAYLRSKL 326
>gi|269797862|ref|YP_003311762.1| peptide chain release factor 2 [Veillonella parvula DSM 2008]
gi|269094491|gb|ACZ24482.1| bacterial peptide chain release factor 2 (bRF- 2) [Veillonella
parvula DSM 2008]
Length = 368
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 145/331 (43%), Positives = 217/331 (65%), Gaps = 1/331 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
R+ L +++ P WD+P A IS+E L ++ K ++ + M+++A +E+D
Sbjct: 31 RIFTLDVQMSDPTFWDNPDKAREISQEATQLKNAVESYKQLVSDIEDANVMLEMAIDEDD 90
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
+E E E + + +++E+ LLSGE D + + AGAGGTE+ DW SM+++MY
Sbjct: 91 LSMESEIKEYVKQIEETLEKQEVLLLLSGEYDANNAILTFHAGAGGTEAQDWCSMLIRMY 150
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA++ G+ + LMDE PG+ AGIK AT V GE AFGY K+E GVHRLVRISPFD+ R
Sbjct: 151 LRWAEKSGFSIELMDEQPGDEAGIKSATFLVKGENAFGYLKSEKGVHRLVRISPFDAAAR 210
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSFAAV V+P D + + I+ D++++ +R+ GAGGQH N TDSAVR+ H PTGI
Sbjct: 211 RHTSFAAVDVMPEI-DDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGIV 269
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQ +RSQ QN+ A+ +L++++ +LE+ +QA++ + + I WG+QIR+YV HPY
Sbjct: 270 VQCQTQRSQMQNREQALRLLRAKLFELELEKQAELKEQIGGTYQAIEWGSQIRSYVFHPY 329
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
+VKD RT+ E + +V++G+LD FI +L
Sbjct: 330 NLVKDHRTSVETGNVQAVMDGNLDPFIEGFL 360
>gi|431795281|ref|YP_007222186.1| peptide chain release factor 2 (bRF-2) [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430785507|gb|AGA70790.1| bacterial peptide chain release factor 2 (bRF-2)
[Desulfitobacterium dichloroeliminans LMG P-21439]
Length = 368
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 155/361 (42%), Positives = 227/361 (62%)
Query: 84 DWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
+WK + + ++ L ++++L EL +P+ WD P A ++ +E
Sbjct: 4 EWKKELENLETRLADLRDSLDVAQRTDKISVLEIELQRPDFWDHPESAQKVMQEISYHQE 63
Query: 144 KMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDP 203
K+K + Q+L + + + +LA EEND LE E E + +++ + EL+ LLSG D
Sbjct: 64 KLKTYTSLRQQLDDLLTLYQLAVEENDESLEPEIEEGVKALQQVLEGLELEILLSGPYDR 123
Query: 204 CSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDG 263
+ + + AGAGGTE+ DW SM+ +MY + +R GY+V MD +PG+ AGIK AT+ + G
Sbjct: 124 NNAILTLHAGAGGTEAQDWVSMLYRMYVRYGERHGYKVETMDLLPGDEAGIKSATLSISG 183
Query: 264 EYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERF 323
E A+GY K+E GVHRLVRISPFD+ RRHTSFA++ VIP D V I DL+++ +
Sbjct: 184 ENAYGYLKSEKGVHRLVRISPFDASGRRHTSFASMDVIPEVMDDGEEVPIPTEDLKVDTY 243
Query: 324 RSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQA 383
R+ GAGGQH N T SAVRI H+PTGI Q+ERSQ QN+A M +LQ+++ +L+ +Q
Sbjct: 244 RASGAGGQHVNKTSSAVRITHLPTGIVVQSQSERSQIQNRAYCMRILQAKLLELKRKQQE 303
Query: 384 QMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSA 443
+E +I+WG+QIR+YV HPY MVKD RTN E S+ +V++G++D FI SYL
Sbjct: 304 DEISEIRGEQQEIAWGSQIRSYVFHPYNMVKDHRTNEETSNTGAVMDGEIDQFIASYLQK 363
Query: 444 S 444
+
Sbjct: 364 T 364
>gi|350570131|ref|ZP_08938502.1| peptide chain release factor RF2 [Neisseria wadsworthii 9715]
gi|349797416|gb|EGZ51180.1| peptide chain release factor RF2 [Neisseria wadsworthii 9715]
Length = 367
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 151/343 (44%), Positives = 223/343 (65%), Gaps = 2/343 (0%)
Query: 99 IKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEH 158
I+ L ++ RL + P+LW+DP A I +E L G + + + + ++
Sbjct: 23 IRVYLDYQGKKDRLEEVIGLSEDPDLWNDPKKAQEIGKERKILEGIVLTLDSIGSGIEDN 82
Query: 159 IDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTE 218
+I++A EEND E + + + E E + + D +C+I++ AGAGGTE
Sbjct: 83 RMLIEMAVEENDEAGFAAVQEDVAALEAQMAELEFKRMFNQPADANNCFIDITAGAGGTE 142
Query: 219 SMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHR 278
+ DWA M+L+MY + +R+G+++ +++E GEIAGI RATIK++GEYA+G + E G+HR
Sbjct: 143 AEDWAGMLLRMYSRYGERKGFKLEILEEDEGEIAGINRATIKLEGEYAYGLLRTETGIHR 202
Query: 279 LVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDS 338
LVR SPFDS +RHTSFA+V V P D S ++IN SDLRI+ +R+ GAGGQH N TDS
Sbjct: 203 LVRYSPFDSNNKRHTSFASVFVYPEV-DDSIEIEINPSDLRIDTYRASGAGGQHINKTDS 261
Query: 339 AVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISW 398
AVRI H PTGI CQN+RSQH NKA+AM +L+S++ +LE+ ++ + +S +D+ W
Sbjct: 262 AVRITHEPTGIVVQCQNDRSQHANKAAAMDMLKSKLFELEMRKRNEEKQSLEESKSDVGW 321
Query: 399 GNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
G+QIR+YV R +KDLRT +EV + +V++GDLDGFI + L
Sbjct: 322 GHQIRSYVFDSSR-IKDLRTGHEVGNIKAVMDGDLDGFIEASL 363
>gi|86750123|ref|YP_486619.1| peptide chain release factor 2 [Rhodopseudomonas palustris HaA2]
gi|86573151|gb|ABD07708.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodopseudomonas
palustris HaA2]
Length = 322
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 151/307 (49%), Positives = 214/307 (69%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
+E SL + + E+EL ++I+MI+L E D + E+ AL ++++ +EL+A
Sbjct: 2 QERTSLEDSLTGIGKVERELSDNIEMIELGEAEGDEGVVREAEAALKALKKEVARRELEA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+EV AGAGGTES DWASM+L+MY WA++ G++V ++E GE AGIK
Sbjct: 62 LLSGEADRFDTYLEVHAGAGGTESQDWASMLLRMYTRWAEKHGFKVEYLEESEGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI++ G A+G+ K E GVHRLVRISPFDS RRHTSF++V + P D+S + I E
Sbjct: 122 SATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVI-DNSIKIDIAE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD+R++ RSGGAGGQH N T+SAVR+ H+PTG+ CQ RSQH+N+A A +L++R+
Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHVPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
++E+ ++ + A + T+I WG+QIR+YVL PY+MVKDLRT + SD VL+GDLD
Sbjct: 241 EIELKKREEQAAADQAAKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDE 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMAATLA 307
>gi|418055784|ref|ZP_12693838.1| peptide chain release factor 2 [Hyphomicrobium denitrificans 1NES1]
gi|353210062|gb|EHB75464.1| peptide chain release factor 2 [Hyphomicrobium denitrificans 1NES1]
Length = 323
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 154/311 (49%), Positives = 210/311 (67%), Gaps = 3/311 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
R+ +L + + K +++ + + +I+L END E AL + ++ + ++A
Sbjct: 2 RQRQALERAVGDFKRLQRDYEDALTLIELGEAENDEASIAEGEAALKRVDIEAHHRSVEA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
+LSGE D S Y+EV AGAGGTES DWASM+ +MY W +RRGY+V L+DE PGE AGIK
Sbjct: 62 MLSGEADAMSTYVEVHAGAGGTESQDWASMLARMYARWGERRGYKVKLIDESPGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
AT ++DG+ A+G+ K E GVHRLVRISPFDS RRHTSFA+V V P D + V +N
Sbjct: 122 SATFEIDGDNAYGWLKTEAGVHRLVRISPFDSNARRHTSFASVTVYPVI-DDTIEVDVNP 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
+D+ I RS GAGGQH N T+SAVR++H P+GI Q +RSQHQNK A L++R+
Sbjct: 181 ADVDISFARSSGAGGQHVNRTESAVRLVHKPSGIVIFAQEQRSQHQNKDIAFKRLKARLY 240
Query: 376 QLEI-ARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLD 434
LE+ R+A+ NAE + TDI WG+QIR+YVL PY++VKDLRT + ++P VL+GD+D
Sbjct: 241 DLELKKREAKANAEQA-AKTDIGWGHQIRSYVLQPYQLVKDLRTGAQSTNPSEVLDGDID 299
Query: 435 GFILSYLSASL 445
FI + LS L
Sbjct: 300 PFIEAALSQRL 310
>gi|121603978|ref|YP_981307.1| peptide chain release factor 2 [Polaromonas naphthalenivorans CJ2]
gi|120592947|gb|ABM36386.1| bacterial peptide chain release factor 2 (bRF-2) [Polaromonas
naphthalenivorans CJ2]
Length = 347
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 153/332 (46%), Positives = 216/332 (65%), Gaps = 4/332 (1%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
+LN ++A L P +WD+P A + RE SL + + EQEL ++ ++ ++++++ND
Sbjct: 15 KLNEVNAALEDPKVWDNPKRAQELGREKKSLEDVVLILDRLEQELSDNTELFEMSKDDND 74
Query: 171 TELELESLEALLTMRRKSKEK-ELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
E + ++E EK E + + DP +C++++QAGAGGTE+ DWASM+L+
Sbjct: 75 -EAGMRAIEGEAAKVAAEVEKMEFRRMFNNPADPLNCFLDIQAGAGGTEACDWASMLLRQ 133
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y +A+R+G++ T+ DE G+ AGIK ATIK++GEYAFG + E GVHRLVR SPFDS
Sbjct: 134 YLKYAERKGFKTTIEDESAGDTAGIKGATIKIEGEYAFGLLRTETGVHRLVRKSPFDSSG 193
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RHTSFA+V V P D S + IN +D+R + +R+ GAGGQH N TDSAVR+ HIPTGI
Sbjct: 194 GRHTSFASVFVYPEI-DDSIEIDINPADVRTDTYRASGAGGQHINKTDSAVRLTHIPTGI 252
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHP 409
CQ RSQH N+ A L+SR+ E+ +Q + + + TD+ WG+QIR+YVL
Sbjct: 253 VVQCQEGRSQHGNRDVAWKRLRSRLYDFELRKQQEAQQKLEDTKTDVGWGHQIRSYVLDN 312
Query: 410 YRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
R +KDLRTNYE S VL+GDLD FI + L
Sbjct: 313 SR-IKDLRTNYETSATQKVLDGDLDPFIEASL 343
>gi|170751458|ref|YP_001757718.1| peptide chain release factor 2 [Methylobacterium radiotolerans JCM
2831]
gi|170657980|gb|ACB27035.1| peptide chain release factor 2 [Methylobacterium radiotolerans JCM
2831]
Length = 321
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 150/307 (48%), Positives = 208/307 (67%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + +K E++L + +I+L E D E A+L + +++ ++++
Sbjct: 2 RERQQLDEAVTAIKKLERDLEDGATLIELGEMEGDESSIREGEAAILAVEKEAASRQVET 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+EV AGAGGTES DWA+M+ +MY WA+RR Y+V +++ GE AGIK
Sbjct: 62 LLSGEADGFDTYLEVHAGAGGTESQDWANMLQRMYARWAERRKYKVEVVEMTDGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
AT+ + G A+G+ K E GVHRLVRISP+DS RRHTSFA+V V P D ++I E
Sbjct: 122 GATLLIKGHNAYGWLKTESGVHRLVRISPYDSSARRHTSFASVWVYPVI-DDRIEIEIKE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD RI+ +RS GAGGQH NTTDSAVRI H PTGI CQ ERSQH+N+A+A +L++R+
Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAVRITHNPTGIVVACQQERSQHKNRATAWNMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+LE+ ++ + + TDI WG+QIR+YVL PY++VKDLRT + +DPD VL+GDLD
Sbjct: 241 ELELKKREEKANAEAAAKTDIGWGHQIRSYVLQPYQLVKDLRTGTQSTDPDEVLDGDLDP 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMEASLA 307
>gi|163795148|ref|ZP_02189116.1| Protein chain release factor B [alpha proteobacterium BAL199]
gi|159179546|gb|EDP64075.1| Protein chain release factor B [alpha proteobacterium BAL199]
Length = 322
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 143/310 (46%), Positives = 215/310 (69%), Gaps = 1/310 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
+E L ++ EV Q L + + +I+L E D ++ + L +R K++ ++++
Sbjct: 2 QERTRLEKQLGEVNQLNQGLEDALMLIELGETEGDDATVADAEKELEAIRVKAESMQIES 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D CY+EV AGAGGTE+ DWA M+L+MY W++RRG++V ++E GE AG+K
Sbjct: 62 LLSGEADANDCYLEVHAGAGGTEAQDWAEMLLRMYTRWSERRGFKVEWLEESQGEEAGLK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
AT+K+ G A+G+ K E GVHRLVRISP+DS RRHTSF++ V P D S + + +
Sbjct: 122 SATVKISGHNAYGWLKIESGVHRLVRISPYDSQARRHTSFSSAWVYPVI-DDSIDIVVED 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
DL+++ +R+ GAGGQH N TDSA+RI H+P+GI CQ +RSQH+N+A+AM +L++R+
Sbjct: 181 KDLKVDTYRASGAGGQHVNRTDSAIRITHLPSGIVVQCQADRSQHRNRATAMEMLKARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ R+ + + + +DI WG+QIR+YVL PY+MVKDLRTN E S+P +VL+GD+D
Sbjct: 241 EAELKRREEEASATEATKSDIGWGHQIRSYVLQPYQMVKDLRTNEESSNPAAVLDGDIDA 300
Query: 436 FILSYLSASL 445
F+ + L+A +
Sbjct: 301 FLEAALAARV 310
>gi|337288092|ref|YP_004627564.1| hypothetical protein TOPB45_0534 [Thermodesulfobacterium sp. OPB45]
gi|334901830|gb|AEH22636.1| hypothetical protein TOPB45_0534 [Thermodesulfobacterium geofontis
OPF15]
Length = 378
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 148/339 (43%), Positives = 214/339 (63%), Gaps = 2/339 (0%)
Query: 103 LQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMI 162
L+ + L +L + EL WD ++ +E + K+ ++ E++ E ++
Sbjct: 31 LEPQKLETKLIKIEEELQNNKDWDSQ-KIKKLLQERAQIFEKISILENLERKFKEILEWY 89
Query: 163 KLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDW 222
L +EE ++ LE L + + K +E LLSGE D S + + AG GGT++ DW
Sbjct: 90 SLYKEEKSFDILNTLLEELTSFEKTFKTEETKLLLSGEYDSSSAILSIHAGTGGTDAQDW 149
Query: 223 ASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRI 282
AS++L+MY WA+++GY+V ++D +PGE AGIK A + ++GE A+GY K E G+HRL+RI
Sbjct: 150 ASILLRMYVKWAEKKGYKVKIVDILPGEEAGIKNAVLLIEGEKAYGYLKGEKGIHRLIRI 209
Query: 283 SPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRI 342
SPF++ +RHTSFA+V VIP + V+I DL+IE R+ G GGQH N T++AVRI
Sbjct: 210 SPFNANSKRHTSFASVTVIPQI-EEDIEVEIRPEDLKIETMRASGHGGQHVNKTETAVRI 268
Query: 343 IHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQI 402
HIPTGIT TCQNERSQ+ NK +A+ +L+SR+ QLE + +ISWGNQI
Sbjct: 269 THIPTGITVTCQNERSQYLNKMTALKILRSRLYQLEKQKLESKKESLIGEKKEISWGNQI 328
Query: 403 RTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
RTY LHPY++VKD RT YE + +L+G++D FI YL
Sbjct: 329 RTYTLHPYKVVKDHRTQYESYKVEEILDGEIDDFIREYL 367
>gi|262274920|ref|ZP_06052731.1| peptide chain release factor 2 [Grimontia hollisae CIP 101886]
gi|262221483|gb|EEY72797.1| peptide chain release factor 2 [Grimontia hollisae CIP 101886]
Length = 347
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 150/335 (44%), Positives = 218/335 (65%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++AEL +P++W+DP A + RE SL ++ + Q ++++LA EEND
Sbjct: 15 RLEEVNAELEQPDVWNDPERAQALGRERASLEAVVETIDQLAQGGEYITELLELAVEEND 74
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
E E L + K + E + SG+ D CYI++QAG+GGTE+ DW SM+L+MY
Sbjct: 75 QETFDEIEPELNDLEDKLAKLEFRRMFSGDHDASDCYIDLQAGSGGTEAQDWTSMMLRMY 134
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA +G++ +++ G++AG+K AT+++ GEYA+G+ + E GVHRLVR SPFDSG R
Sbjct: 135 LRWADAKGFKTEVIEVSEGDVAGLKSATVRISGEYAYGWLRTETGVHRLVRKSPFDSGGR 194
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSFA+ + P D + + IN +DLRI+ +R+ GAGGQH NTT+SAVRI HIPT
Sbjct: 195 RHTSFASAFIYPEV-DENIDIDINPADLRIDVYRASGAGGQHVNTTESAVRITHIPTNTV 253
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+NK AM L++++ +LE+ +Q + + +DI WG+QIR+YVL
Sbjct: 254 VQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEAAKSDIGWGSQIRSYVLDDS 313
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E + +VL+GDLD FI + L + L
Sbjct: 314 R-IKDLRTGVENRNTQAVLDGDLDKFIEASLKSGL 347
>gi|209519985|ref|ZP_03268764.1| peptide chain release factor 2 [Burkholderia sp. H160]
gi|209499582|gb|EDZ99658.1| peptide chain release factor 2 [Burkholderia sp. H160]
Length = 384
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 150/343 (43%), Positives = 225/343 (65%), Gaps = 6/343 (1%)
Query: 103 LQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMI 162
+ + +RL ++ EL P++W+D HA + +E L + ++ + ++ + D+
Sbjct: 44 FDYDDKALRLIEVNRELEDPDVWNDAKHAQALGKEKKLLDDTVGKLTSITNDVNDAQDLF 103
Query: 163 KLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDW 222
++AREE D E L + + + E + + DP + ++++QAGAGGTE+ DW
Sbjct: 104 EMAREEADDETLLACEADAQAIEARVADMEFRRMFANPADPNNAFLDIQAGAGGTEACDW 163
Query: 223 ASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRI 282
ASM+L+ Y + +R+G++ ++++ G++AGIK ATIK++GEYA+G+ + E GVHRLVR
Sbjct: 164 ASMLLRQYLRYCERKGFKTEVLEQTEGDVAGIKNATIKIEGEYAYGFLRTETGVHRLVRK 223
Query: 283 SPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRI 342
SPFDS RHTSF++V V P D S V+IN +DLRI+ +R+ GAGGQH N TDSAVRI
Sbjct: 224 SPFDSSGGRHTSFSSVFVYPEI-DDSIEVEINPADLRIDTYRASGAGGQHINKTDSAVRI 282
Query: 343 IHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQI 402
H+P+GI CQN+RSQH+N+A AM +L+SR+ + EI ++ + TD+ WG+QI
Sbjct: 283 THMPSGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEIRKRQAEQDKLEAGKTDVGWGHQI 342
Query: 403 RTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R+YVL R +KDLRTN E+S+ SVL+GDLD FI SASL
Sbjct: 343 RSYVLDNSR-IKDLRTNVEISNTKSVLDGDLDPFI----SASL 380
>gi|91976917|ref|YP_569576.1| peptide chain release factor 2 [Rhodopseudomonas palustris BisB5]
gi|91683373|gb|ABE39675.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodopseudomonas
palustris BisB5]
Length = 322
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 150/307 (48%), Positives = 214/307 (69%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
+E SL + + E+EL ++++MI+L E D + E+ AL ++++ +EL+A
Sbjct: 2 QERTSLEDALTGIGKVERELTDNVEMIELGEAEGDDGVVSEAEAALKALKKEVARRELEA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+EV AGAGGTES DWASM+L+MY WA++ G+++ ++E GE AGIK
Sbjct: 62 LLSGEADRFDSYLEVHAGAGGTESQDWASMLLRMYTRWAEKHGFKIEYLEESEGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI++ G A+G+ K E GVHRLVRISPFDS RRHTSF++V + P D+S + I E
Sbjct: 122 SATIQISGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQIFPVI-DNSIKIDIAE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD+R++ RSGGAGGQH N T+SAVR+ HIPTG+ CQ RSQH+N+A A +L++R+
Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
++E+ ++ + A + T+I WG+QIR+YVL PY+MVKDLRT + SD VL+GDLD
Sbjct: 241 EIELKKREEQAAADQAAKTEIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDE 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMAATLA 307
>gi|337290240|ref|YP_004629261.1| peptide chain release factor RF-2 [Corynebacterium ulcerans
BR-AD22]
gi|397653481|ref|YP_006494164.1| peptide chain release factor 2 [Corynebacterium ulcerans 0102]
gi|334698546|gb|AEG83342.1| peptide chain release factor RF-2 [Corynebacterium ulcerans
BR-AD22]
gi|393402437|dbj|BAM26929.1| peptide chain release factor 2 [Corynebacterium ulcerans 0102]
Length = 367
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 161/347 (46%), Positives = 226/347 (65%), Gaps = 12/347 (3%)
Query: 95 SIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQE 154
++ I+K + + L R+ L + + P LWD+P HA +++ E S+ ++K++ Q
Sbjct: 15 TLTTIEKVMDPEELASRVRELEQQASDPTLWDNPDHAQKVTTELSSVQAQLKKLTGLRQR 74
Query: 155 LLEHIDMIKLAREEND-TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAG 213
+ + M +LA EE D TEL E L AL + + E+ +LSGE D I +++G
Sbjct: 75 IDDIPVMYELAEEEGDGTELADEELAALTA---EIESLEVKTMLSGEYDSREAVINIRSG 131
Query: 214 AGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAE 273
AGG ++ DWA M+++MY WA++ +V + D E AGIK AT V GEY +G E
Sbjct: 132 AGGVDAADWAEMLMRMYVRWAEKNDRKVDIYDISYAEEAGIKSATFVVHGEYMYGQLSVE 191
Query: 274 VGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHA 333
G HRLVRISPFD+ RR TSFA V V+P + + H+ I +S++R++ +RS G GGQ
Sbjct: 192 QGAHRLVRISPFDNQGRRQTSFAEVEVLPVV-EQTDHIDIPDSEVRVDVYRSSGPGGQSV 250
Query: 334 NTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ---AQMNAEHT 390
NTTDSAVR+ HIPTGI TCQNE+SQ QNKASAM VLQ+++ LE RQ A+++A
Sbjct: 251 NTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKL--LEKKRQEERAELDA--L 306
Query: 391 QSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
+ + SWGNQ+R+YVLHPY+MVKDLRTNYEV+DP VL+GD+DG +
Sbjct: 307 GAGGNASWGNQMRSYVLHPYQMVKDLRTNYEVNDPQKVLDGDIDGLL 353
>gi|226941341|ref|YP_002796415.1| PrfB [Laribacter hongkongensis HLHK9]
gi|226716268|gb|ACO75406.1| PrfB [Laribacter hongkongensis HLHK9]
Length = 368
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 148/343 (43%), Positives = 220/343 (64%), Gaps = 2/343 (0%)
Query: 99 IKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEH 158
I++ L + RL +S + P +W+DP A + RE +L + + + L +
Sbjct: 24 IRQYLDYDGKKDRLEEVSRLVEDPTIWEDPKRAQELGREKKALEDVVLVIDSILSTLADS 83
Query: 159 IDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTE 218
++ + R E D + L + L + + + E + S +DP SC++++Q+GAGGTE
Sbjct: 84 RELFDMGRAEEDDDTVLAVRDDLAGVETRLEMLEFRRMFSNPMDPNSCFVDIQSGAGGTE 143
Query: 219 SMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHR 278
+ DWASM+ +MY + +R+ ++V +++E GE+AGIK AT+KV+GEYA+G+ + E GVHR
Sbjct: 144 AQDWASMLERMYLRYCERKNFKVEVIEESEGEVAGIKSATLKVEGEYAYGFLRTETGVHR 203
Query: 279 LVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDS 338
LVR SPFDS RR TSFA+V V P D S + IN +DLRI+ +R+ GAGGQH N TDS
Sbjct: 204 LVRNSPFDSNNRRQTSFASVFVYPEV-DDSIEIDINPADLRIDTYRASGAGGQHINKTDS 262
Query: 339 AVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISW 398
AVRI H+PT I CQN+RSQH+N+A AM +L++R+ +LE+ ++ + + TD+ W
Sbjct: 263 AVRITHLPTNIVVQCQNDRSQHKNRAEAMSMLKARLFELELRKRNEEKQALEDTKTDVGW 322
Query: 399 GNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
G+QIR+YV R VKDLRT EV + V++GDLDGFI + L
Sbjct: 323 GHQIRSYVFDQSR-VKDLRTLVEVGNVKGVMDGDLDGFIEASL 364
>gi|383757704|ref|YP_005436689.1| peptide chain release factor RF-2 PrfB [Rubrivivax gelatinosus
IL144]
gi|381378373|dbj|BAL95190.1| peptide chain release factor RF-2 PrfB [Rubrivivax gelatinosus
IL144]
Length = 351
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 147/337 (43%), Positives = 225/337 (66%), Gaps = 4/337 (1%)
Query: 110 VRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEN 169
+RLN ++A L P++W++P A + RE SL + + L +++++ ++++ +
Sbjct: 18 LRLNEVNAALENPSVWNEPKRAQELGREKKSLEDVVGTIDHLASNLADNLELFEMSKADE 77
Query: 170 DTELELESLEALLTMRRKSKEK-ELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQ 228
D + L ++EA R++ E+ E + S DP +C+I++QAGAGGTE+ DWASM+L+
Sbjct: 78 DFD-GLAAIEAEAHALRETVERLEFRRMFSNPADPSNCFIDIQAGAGGTEACDWASMLLR 136
Query: 229 MYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSG 288
Y + +++G++ +M+E G++AGI+ AT+K++G+YAFG+ + E GVHRLVR SPFDS
Sbjct: 137 QYLKYCEKKGFKAEVMEETEGDVAGIRSATLKIEGDYAFGHLRTETGVHRLVRKSPFDSA 196
Query: 289 KRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTG 348
RHTSFA++ V P D S + IN +D+R + FR+ GAGGQH N TDSAVR+ HIPTG
Sbjct: 197 GGRHTSFASLFVYPEV-DDSIEIDINPADVRTDTFRASGAGGQHINKTDSAVRLTHIPTG 255
Query: 349 ITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLH 408
I CQN+RSQH+N+ A +L+SR+ + E+ +Q + + S TD+ WG+QIR+YVL
Sbjct: 256 IVVQCQNDRSQHRNRDEAWAMLRSRLYEHEMRKQMEAQQKLEDSKTDVGWGHQIRSYVLD 315
Query: 409 PYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E+S+ VL+GDLD FI + L L
Sbjct: 316 QSR-IKDLRTGVEISNTQKVLDGDLDPFIEASLKQGL 351
>gi|312621634|ref|YP_004023247.1| hypothetical protein Calkro_0529 [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202101|gb|ADQ45428.1| hypothetical protein Calkro_0529 [Caldicellulosiruptor
kronotskyensis 2002]
Length = 372
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 149/335 (44%), Positives = 220/335 (65%), Gaps = 1/335 (0%)
Query: 108 LNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLARE 167
L L L E +KP W D ++ ++ ++ + K++ + + + + +L+ E
Sbjct: 30 LESELKSLENETSKPEFWQDIENSQKVLQKIKRIKDKIERFQKLYSQWEDLKVLTELSIE 89
Query: 168 ENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVL 227
E + E+ E + L+++ RK E +++ LL+G D + + + AGAGGTE+ DWA M+L
Sbjct: 90 EGNHEMSEELEKELISLERKIDEFKIEILLNGPYDKNNAILSIHAGAGGTEAQDWAEMLL 149
Query: 228 QMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDS 287
+MY WA ++GY+V +D +PGE AGIK TI++ GE A+GY KAE GVHRLVRISPFD+
Sbjct: 150 RMYTRWAAKKGYKVETLDILPGEEAGIKNVTIRIVGENAYGYLKAEKGVHRLVRISPFDA 209
Query: 288 GKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPT 347
RRHTSFAAV V+P D T ++I E DL I+ +RS GAGGQH N T+SAVRI HIPT
Sbjct: 210 AGRRHTSFAAVEVLPEVED-DTDIEIKEEDLEIDTYRSSGAGGQHVNKTESAVRIKHIPT 268
Query: 348 GITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVL 407
GI TCQNERSQH+N+ A+ +L++++ +L+ + + + T+I WGNQIR+YV
Sbjct: 269 GIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQTEIGWGNQIRSYVF 328
Query: 408 HPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
PY +VKD RT EV + ++V++G++D FI +YL
Sbjct: 329 CPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYLK 363
>gi|115524982|ref|YP_781893.1| peptide chain release factor 2 [Rhodopseudomonas palustris BisA53]
gi|115518929|gb|ABJ06913.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodopseudomonas
palustris BisA53]
Length = 322
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 150/307 (48%), Positives = 212/307 (69%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
+E SL + + E+EL +++ MI+L E D + E+ AL +++ +EL+A
Sbjct: 2 QERTSLEDSLDGIGKVERELDDNVGMIELGEAEGDDSVVAEAEAALKKLKKDVARRELEA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+EV AGAGGTES DWASM+L+MY WA++ G+++ ++E GE AGIK
Sbjct: 62 LLSGEADRFDSYLEVHAGAGGTESQDWASMLLRMYTRWAEKHGFKIEYLEETEGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI++ G A+G+ K E GVHRLVRISP+DS RRHTSF++V + P D+S + I E
Sbjct: 122 SATIQISGHNAYGWLKTEAGVHRLVRISPYDSNARRHTSFSSVQIFPVV-DNSIKIDIAE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD+R++ RSGGAGGQH N T+SAVR+ H+PTG+ CQ RSQH+NKA A +L++R+
Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHVPTGVAVVCQAGRSQHKNKAQAWDMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
++E+ ++ + A + TDI WG+QIR+YVL PY+MVKDLRT + SD VL+GDLD
Sbjct: 241 EIELKKREEQAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLDGDLDE 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMAATLA 307
>gi|339482086|ref|YP_004693872.1| peptide chain releast factor 2 [Nitrosomonas sp. Is79A3]
gi|338804231|gb|AEJ00473.1| peptide chain releast factor 2 [Nitrosomonas sp. Is79A3]
Length = 368
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 154/356 (43%), Positives = 231/356 (64%), Gaps = 4/356 (1%)
Query: 87 SHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMK 146
+H ++ +++ L + RL+ L+ L P +W+D I RE L +
Sbjct: 11 NHLQDLSNRANELRRFLDFDTKQTRLSELTRLLEDPAIWNDSKRTQEIGREKKLLEDTVF 70
Query: 147 EVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKS-KEKELDALLSGELDPCS 205
+++ EQ+L + ++ ++A++E+D LES+E + K E + S +DP +
Sbjct: 71 TLQSMEQQLHDAQELFQIAKDESDGAA-LESIEIDVNKVEKVIANLEFRRMFSDPMDPNN 129
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
C++++Q+G+GGTE+ DWA+M+ +MY + +R+G V +++E G+IAGIK AT+KV GEY
Sbjct: 130 CFVDIQSGSGGTEAQDWAAMLERMYLRYCERQGLNVEILEESVGDIAGIKSATLKVTGEY 189
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
A+GY + E GVHRLVR SPFDSG RRHTSFA+V V P D + ++IN +DLRI+ FR+
Sbjct: 190 AYGYLRTETGVHRLVRKSPFDSGNRRHTSFASVFVYPEV-DDTIEIEINPADLRIDTFRA 248
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQM 385
GAGGQH N TDSA+RI H PTGI CQ+ RSQH+NKA A+ +L+SR+ + E+ ++ +
Sbjct: 249 SGAGGQHINKTDSAIRITHNPTGIVVQCQSGRSQHRNKADALVMLKSRLYEAELRKRNEE 308
Query: 386 NAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
++ TDI WG+QIR+YVL R +KDLRTN E+ + SVL+GDL FI + L
Sbjct: 309 KQAIEETKTDIGWGHQIRSYVLDQSR-IKDLRTNIEIGNTQSVLDGDLSHFIEASL 363
>gi|451936364|ref|YP_007460218.1| peptide chain release factor RF-2 [Candidatus Kinetoplastibacterium
oncopeltii TCC290E]
gi|451777287|gb|AGF48262.1| peptide chain release factor RF-2 [Candidatus Kinetoplastibacterium
oncopeltii TCC290E]
Length = 367
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 152/340 (44%), Positives = 225/340 (66%), Gaps = 4/340 (1%)
Query: 99 IKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEH 158
+++ L++ RL+++++EL PNLWD+ +A +++E + + ++ E+ +
Sbjct: 23 LRRYLEYNKKQERLHIINSELEDPNLWDNIGYAQDLNKEKKHIEKIINTLELLHNEINDS 82
Query: 159 IDMIKLAREENDTELELESLEALLTM-RRKSKEKELDALLSGELDPCSCYIEVQAGAGGT 217
I++ ++ +ND + ++S+E L + K KE E + E D +C++++Q+GAGGT
Sbjct: 83 IELFYMSEIDNDFKT-IKSIENNLDLFNNKIKEMEFCRMFVNETDKLNCFLDIQSGAGGT 141
Query: 218 ESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVH 277
E+ DWASM+L+ Y +++ +G+ L+ E GEIAGIK ATI++ GEYAFGY + E GVH
Sbjct: 142 EAQDWASMLLRQYIRYSETKGFSFELISESAGEIAGIKSATIRIIGEYAFGYLRTETGVH 201
Query: 278 RLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTD 337
RLVR SPF+S RHTSFA++ V P D S + IN +DLRI+ +R+ GAGGQH N TD
Sbjct: 202 RLVRKSPFNSSGGRHTSFASIFVYPEI-DDSFDIIINPADLRIDTYRASGAGGQHINKTD 260
Query: 338 SAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDIS 397
SAVRI H TGI CQN+RSQH+NKA AM +L+S++ LE+ + + S TD+
Sbjct: 261 SAVRITHNTTGIVVQCQNDRSQHRNKAEAMKMLKSKLFDLEMRNRLVEQKKLEDSKTDVG 320
Query: 398 WGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
WGNQIR+YVL R +KDLRTN EVS+ +L+GDLD FI
Sbjct: 321 WGNQIRSYVLDKSR-IKDLRTNIEVSNVQKILDGDLDIFI 359
>gi|218961845|ref|YP_001741620.1| Protein chain release factor B [Candidatus Cloacamonas
acidaminovorans]
gi|167730502|emb|CAO81414.1| Protein chain release factor B [Candidatus Cloacamonas
acidaminovorans str. Evry]
Length = 340
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 142/327 (43%), Positives = 213/327 (65%), Gaps = 1/327 (0%)
Query: 115 LSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELE 174
L ++N P+ W+D A +IS++ L +++ +K + E + L E+ + EL
Sbjct: 5 LEQKMNAPDFWEDQTQAKKISKQLSQLRDELEHLKKLDTVKGELETYLTLLDEDFNAELL 64
Query: 175 LESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWA 234
E++ L ++ ++ E++ L+ + D + + +GAGGTES DWA M+L+MY WA
Sbjct: 65 AEAVSELPRIQSFIEKAEIECYLNDKYDHNDALLTIHSGAGGTESQDWAEMLLRMYAHWA 124
Query: 235 QRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTS 294
++ Y ++D +PGE AG+K ++++ G+YA+G K+E+GVHRLVRISPF++ +R TS
Sbjct: 125 EKNDYSFDIIDSLPGEEAGLKSVSVEIKGDYAYGMLKSEIGVHRLVRISPFNAQGKRQTS 184
Query: 295 FAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQ 354
FA+V V P D ++IN DL+I+ FR+ GAGGQ+ NTTDSAVRI H+PT IT TCQ
Sbjct: 185 FASVFVYP-EFDEDLEIEINPKDLKIDTFRASGAGGQYVNTTDSAVRITHLPTNITVTCQ 243
Query: 355 NERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVK 414
NERSQ QN+ AM +L+SR+ Q ++ + S T+I WGNQIR+YV HPY+M+K
Sbjct: 244 NERSQMQNREKAMSILKSRLYQYYEEQREKEKKNLENSKTEIGWGNQIRSYVFHPYQMIK 303
Query: 415 DLRTNYEVSDPDSVLEGDLDGFILSYL 441
D RTNYE + D V+ GDL+ FI ++L
Sbjct: 304 DHRTNYETGNVDKVMNGDLNDFIYAWL 330
>gi|350565918|ref|ZP_08934640.1| peptide chain release factor RF2 [Peptoniphilus indolicus ATCC
29427]
gi|348663296|gb|EGY79887.1| peptide chain release factor RF2 [Peptoniphilus indolicus ATCC
29427]
Length = 348
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 148/321 (46%), Positives = 210/321 (65%), Gaps = 1/321 (0%)
Query: 121 KPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEA 180
+PN WD+ A ++ +E GK+ + +++ E D+I+L E D E +
Sbjct: 22 EPNFWDNSESAQKVIKELNHHQGKVDKYDKLSKKIEEANDLIELMELEEDFTFYDEFKKD 81
Query: 181 LLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYR 240
L + + + E +L+ LL+GE D C + + AGAGGTE+ DWASM+L+MY +A+ +G++
Sbjct: 82 LEDIEKFADEFKLETLLNGEYDANDCILTIHAGAGGTEAQDWASMLLRMYTRYAESKGFK 141
Query: 241 VTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAV 300
V ++D + AGIK AT+ + G+ +GY K E GVHRLVRISPFDS KRRHTSF++V V
Sbjct: 142 VEILDIQKEDEAGIKSATLLISGDNGYGYMKGEKGVHRLVRISPFDSNKRRHTSFSSVDV 201
Query: 301 IPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQH 360
P D + V+I DL+++ +RS GAGGQH NTTDSAVRI HIPTGI CQNERSQ
Sbjct: 202 YPQI-DGAVEVEIRAEDLKVDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQCQNERSQI 260
Query: 361 QNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNY 420
QN+ +AM +L++++ L Q + + + + I+WG+QIR+YV PY +VKD RTN
Sbjct: 261 QNRETAMNMLKAKLIALAEEEQKEKIDDLQGNYSQIAWGSQIRSYVFQPYTLVKDHRTNT 320
Query: 421 EVSDPDSVLEGDLDGFILSYL 441
EV D + V++GDLD FI SYL
Sbjct: 321 EVGDVNRVMDGDLDEFINSYL 341
>gi|300869767|ref|YP_003784638.1| peptide chain release factor RF-2 [Brachyspira pilosicoli 95/1000]
gi|404476074|ref|YP_006707505.1| peptide chain release factor RF-0 [Brachyspira pilosicoli B2904]
gi|434382084|ref|YP_006703867.1| peptide chain release factor RF-2 [Brachyspira pilosicoli WesB]
gi|300687466|gb|ADK30137.1| peptide chain release factor RF-2 [Brachyspira pilosicoli 95/1000]
gi|404430733|emb|CCG56779.1| peptide chain release factor RF-2 [Brachyspira pilosicoli WesB]
gi|404437563|gb|AFR70757.1| peptide chain release factor RF-0 [Brachyspira pilosicoli B2904]
Length = 312
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 141/288 (48%), Positives = 199/288 (69%), Gaps = 1/288 (0%)
Query: 160 DMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTES 219
+++++A E NDTE+E E + +++ E E L SGE D + Y+ + AGAGGTES
Sbjct: 26 ELVEMAIESNDTEMEKELETECIELQKVFNELETKNLFSGEFDSKNAYLTLNAGAGGTES 85
Query: 220 MDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRL 279
DWASM+ +MY + +R G+ V DE+PG+ AGIK+ + V G YA+GY ++E+GVHRL
Sbjct: 86 CDWASMLSRMYVRFCERHGFTVETTDELPGDEAGIKQISFYVQGLYAYGYLRSEIGVHRL 145
Query: 280 VRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSA 339
VRISPFD+ +RHTSF AV+V+P+ D V+IN++DLRI+ +R+ GAGGQH N T SA
Sbjct: 146 VRISPFDANAKRHTSFVAVSVMPDI-DEDIEVEINQADLRIDTYRASGAGGQHVNKTSSA 204
Query: 340 VRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWG 399
+RI HIPT I CQ ERSQH NK AM +L++++ QLE + + + TDI+WG
Sbjct: 205 IRITHIPTNIVVQCQAERSQHNNKDMAMKMLKAKLYQLEKEKLDKEKQKIAGEKTDIAWG 264
Query: 400 NQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDK 447
NQIR+YV PY+MVKDLRT +E + +SV++G++D FI +YL + K
Sbjct: 265 NQIRSYVFQPYQMVKDLRTGHETGNMNSVMDGNIDEFISAYLKQQIKK 312
>gi|192358804|ref|YP_001982940.1| peptide chain release factor 2 [Cellvibrio japonicus Ueda107]
gi|190684969|gb|ACE82647.1| peptide chain release factor 2 [Cellvibrio japonicus Ueda107]
Length = 329
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 156/336 (46%), Positives = 219/336 (65%), Gaps = 12/336 (3%)
Query: 115 LSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELE 174
+ EL + ++WD+P A + RE SL +K +++ + + + +++ +A EEND
Sbjct: 1 MELELAESSVWDNPERAQALGRERSSLEIVVKTIESLDSGVADCGELLDMAVEEND---- 56
Query: 175 LESLEALLTMRRKSKEKELDAL-----LSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
ES+ A + EKEL L SGE DP + Y+++Q+G+GGTE+ DWA MVL+M
Sbjct: 57 -ESMVADVQAEIDRLEKELGVLEFRRMFSGETDPNNAYLDIQSGSGGTEAQDWAEMVLRM 115
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y W + +G++VTL + GE+AGIK ATI +GEYAFG+ + E GVHRLVR SPFDSG
Sbjct: 116 YLRWGEAKGFKVTLEECSAGEVAGIKSATIYFEGEYAFGWLRTETGVHRLVRKSPFDSGN 175
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RRHTSF +V V P D + ++IN +DLRI+ +R+ GAGGQH N TDSA+RI HIP+GI
Sbjct: 176 RRHTSFCSVFVSPEI-DDNIEIEINPADLRIDTYRASGAGGQHVNKTDSAIRITHIPSGI 234
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHP 409
CQNERSQH N+ A +L++R+ + E+ ++ S +DI WG+QIR+YVL
Sbjct: 235 VVQCQNERSQHANRDKAYKMLRARMYEQEMLKRNAEKQAMEDSKSDIGWGSQIRSYVLDD 294
Query: 410 YRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R VKDLRT + S+ +VL+GDLD FI+ L A L
Sbjct: 295 SR-VKDLRTGVQTSNTQAVLDGDLDQFIVESLKAGL 329
>gi|172087665|ref|YP_203835.2| peptide chain release factor 2 [Vibrio fischeri ES114]
gi|229576704|sp|Q5E7P9.2|RF2_VIBF1 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|171902260|gb|AAW84947.2| peptide chain release factor RF-2 [Vibrio fischeri ES114]
Length = 365
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 149/360 (41%), Positives = 230/360 (63%), Gaps = 2/360 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
K+ +++ +++ L + RL ++AEL +P++W++P A + +E SL +
Sbjct: 8 KNRLQDVSERTNILRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERASLEAVV 67
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
+ + +Q + + +++LA EE D E E L + K + E + SG+ D
Sbjct: 68 ETIDLLDQGVEDVDGLLELAVEEEDQETFDEIEPELAELEAKLAKLEFRRMFSGDHDASD 127
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
CYI++Q+G+GGTE+ DW SM+L+MY WA+ +G++V +++ GE+AG+K AT+++ GEY
Sbjct: 128 CYIDLQSGSGGTEAQDWTSMMLRMYLRWAEAKGFKVEVIEVSEGEVAGLKGATVRIAGEY 187
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
A+G+ + E GVHRLVR SPFDS RRHTSFA+ + P D + + IN SDLRI+ +R+
Sbjct: 188 AYGWLRTETGVHRLVRKSPFDSSGRRHTSFASAFIYPEI-DDNIQIDINPSDLRIDVYRA 246
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQM 385
GAGGQH NTT+SAVRI H+PT I CQN+RSQH+NK AM L++++ + E+ +Q
Sbjct: 247 SGAGGQHVNTTESAVRITHVPTNIVVQCQNDRSQHKNKDQAMKQLRAKLFEYELQKQNAE 306
Query: 386 NAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ + +DI WG+QIR+YVL R +KDLRT E + +VL+GDLD FI + L + L
Sbjct: 307 KQANEDAKSDIGWGSQIRSYVLDDSR-IKDLRTGIENRNTQAVLDGDLDKFIEASLKSGL 365
>gi|386266089|ref|YP_005829581.1| Peptide chain release factor 2 (RF-2) [Haemophilus influenzae
R2846]
gi|309973325|gb|ADO96526.1| Peptide chain release factor 2 (RF-2) [Haemophilus influenzae
R2846]
Length = 365
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 151/335 (45%), Positives = 221/335 (65%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++AEL +P++W+DP A + +E SL + +K EQ L + +++LA E D
Sbjct: 33 RLEEVNAELEQPDVWNDPDKAQALGKERVSLEQVVNTIKNLEQGLEDVDGLLELAIEAED 92
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
+ E++ L + ++ ++ E + SGE D C CY+++QAG+GGTE+ DW M+L+MY
Sbjct: 93 EDTFNEAVAELDELEQQLEKLEFRRMFSGEHDACDCYVDLQAGSGGTEAQDWTEMLLRMY 152
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA+ +G++ LM+ G++AG+K ATIKV GEYAFG+ + E G+HRLVR SPFDS R
Sbjct: 153 LRWAESKGFKTELMEVSDGDVAGLKSATIKVSGEYAFGWLRTETGIHRLVRKSPFDSNNR 212
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSF+A V P ++IN +DLRI+ +R+ GAGGQH N T+SAVRI H+P+GI
Sbjct: 213 RHTSFSAAFVYPEID-DDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHMPSGIV 271
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+NK AM L++++ +LE+ ++ + +DI WG+QIR+YVL
Sbjct: 272 VQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDIGWGSQIRSYVLDDS 331
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E + +VL+GDLD FI + L A L
Sbjct: 332 R-IKDLRTGVENRNTQAVLDGDLDRFIEASLKAGL 365
>gi|255320321|ref|ZP_05361506.1| peptide chain release factor 2 [Acinetobacter radioresistens SK82]
gi|421856199|ref|ZP_16288568.1| peptide chain release factor 2 [Acinetobacter radioresistens DSM
6976 = NBRC 102413]
gi|255302760|gb|EET81992.1| peptide chain release factor 2 [Acinetobacter radioresistens SK82]
gi|403188449|dbj|GAB74769.1| peptide chain release factor 2 [Acinetobacter radioresistens DSM
6976 = NBRC 102413]
Length = 351
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 154/336 (45%), Positives = 221/336 (65%), Gaps = 4/336 (1%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL + EL P++W+D A +++E G L + ++ +L + M+ LA E +D
Sbjct: 19 RLEEVLRELEDPSIWNDQSRAQAMAKEKGELENVINVLEGLSTQLEDAQAMLDLAVEADD 78
Query: 171 TELELESLEALLTMRRKSKEK-ELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
L L ++A L+ ++ K E + S +DP CY+E+QAG+GGTE+ DWASM+L+M
Sbjct: 79 ESL-LADVQAELSSAEEALAKLEFRRMFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRM 137
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y W +R G++ LM+E G++AGIK ATI+V+GEYA+G+ + E GVHRLVR SPFDSG
Sbjct: 138 YMRWIERHGFKAELMEESDGDVAGIKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGN 197
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RRHTSF+AV V P D + + IN SD+R + +R+ GAGGQH N TDSAVR+ H+PTGI
Sbjct: 198 RRHTSFSAVFVSPEV-DDNIEIDINPSDVRTDTYRASGAGGQHINKTDSAVRLTHMPTGI 256
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHP 409
CQN+RSQH N+ A L++++ +LE++++ + S +DI WG+QIR+YVL
Sbjct: 257 VVACQNQRSQHANRDHAWKQLRAKLYELEMSKRNEAAQALEDSKSDIGWGSQIRSYVLDD 316
Query: 410 YRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E S+ +VL+GDLD FI + L L
Sbjct: 317 SR-IKDLRTGVENSNTGAVLDGDLDKFIEASLKQGL 351
>gi|398827242|ref|ZP_10585456.1| peptide chain release factor 2 [Phyllobacterium sp. YR531]
gi|398220088|gb|EJN06548.1| peptide chain release factor 2 [Phyllobacterium sp. YR531]
Length = 321
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 146/307 (47%), Positives = 209/307 (68%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + ++ Q L ++I++I + EE D + E+ A+ ++ + +++D
Sbjct: 2 RERQQLEDSINSIRTLSQTLEDNIELIAMGEEEGDKSIVDEAEAAIRDIKTEVDRRQIDT 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+EV +GAGGTES DWA+M+L+MY WA+R+GY+V L++ GE AGIK
Sbjct: 62 LLSGEADANDTYVEVHSGAGGTESQDWANMLLRMYTRWAERKGYKVELLEVHYGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI V G A+G K E GVHRLVRISP+DS RRHTSF+++ V P D + + + E
Sbjct: 122 SATILVKGHNAYGMMKTESGVHRLVRISPYDSNARRHTSFSSIWVYPVV-DDNIDIAVTE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
+D+RI+ +R+ GAGGQH NTTDSAVRI HI TGI CQ ERSQH+N+A+A +L++R+
Sbjct: 181 ADVRIDTYRASGAGGQHVNTTDSAVRITHIATGIVVQCQAERSQHKNRATAWSMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ ++ Q + S TDI WG+QIR+YVL PY++VKDLRT E + P VL+G++D
Sbjct: 241 EAELEKREQAADAISASKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTSPQDVLDGEVDM 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMEAALA 307
>gi|289549137|ref|YP_003474125.1| peptide chain release factor 2 [Thermocrinis albus DSM 14484]
gi|289182754|gb|ADC89998.1| peptide chain release factor 2 [Thermocrinis albus DSM 14484]
Length = 372
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 148/352 (42%), Positives = 230/352 (65%), Gaps = 6/352 (1%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
+ + + +K+ L+ ++ L L + ++W+ A +I + L +++++A
Sbjct: 12 LTERFEEVKESLKLDSMKEELKELDNLMASSHIWNQQEKAKKILQRRKWLEENIQQLEAT 71
Query: 152 EQELLEHIDMIKLAREENDTELELESL--EALLTMRRKSKEKELDALLSGELDPCSCYIE 209
E+ L + +++ + EE+ LE ++L E L + K+ E+ A LSGE+D + Y+
Sbjct: 72 EKVLSDIRELLHITEEED---LETQTLLKEELEKAEQMIKDMEIRAFLSGEMDAKNAYLT 128
Query: 210 VQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGY 269
+QAGAGG E+ DWA M+L+MY+ WA++ GY V ++D P ++AGIK AT+ + G YA+GY
Sbjct: 129 IQAGAGGVEACDWAQMLLRMYRRWAEKHGYEVEVVDITPDDVAGIKSATLLIKGPYAYGY 188
Query: 270 AKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAG 329
K E GVHRLVRISPFD+ RRHTSFA+V V+P D S +++I E D+ +E FR+ GAG
Sbjct: 189 LKGESGVHRLVRISPFDANARRHTSFASVTVVPQI-DESINIEIREEDIEMETFRASGAG 247
Query: 330 GQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEH 389
GQ+ N TD+AVRI H PTGI TCQ ERSQ+QN+ A+ +L++++ QL++ +
Sbjct: 248 GQYVNKTDTAVRIRHKPTGIVVTCQQERSQYQNRMKALELLKAKLYQLKLQELEEKKRAL 307
Query: 390 TQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
T+I WG+QIR+YV PY++VKDLRT E+ D +SV++G++D FI +YL
Sbjct: 308 EGEKTEIGWGHQIRSYVFQPYQLVKDLRTGVEIGDVESVMDGEIDPFIEAYL 359
>gi|398821496|ref|ZP_10579951.1| peptide chain release factor 2 [Bradyrhizobium sp. YR681]
gi|398227833|gb|EJN14000.1| peptide chain release factor 2 [Bradyrhizobium sp. YR681]
Length = 322
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 154/307 (50%), Positives = 209/307 (68%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
+E SL + + EQEL + I MI+L E D + E+ AL T++++ +EL+A
Sbjct: 2 QERTSLEDSLSGIGKVEQELEDDIGMIELGEAEGDAGVVAEAEAALKTLKKEVARRELEA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+EV AGAGGTES DWA M+L+MY WA+ G++V ++E GE AGIK
Sbjct: 62 LLSGEADRFDSYLEVHAGAGGTESQDWAQMLLRMYTRWAETHGFKVEFLEESEGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI+V G A+G+ K E GVHRLVRISPFDS RRHTSF++V V P D S + I E
Sbjct: 122 SATIQVSGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQVFPVI-DDSIKIDIKE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
+D+R++ RSGGAGGQH N T+SAVR+ HIPTG+ CQ RSQH+N+A A +L++R+
Sbjct: 181 ADVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
++E+ ++ + A + TDI WG+QIR+YVL PY+MVKDLRT + SD VL G+LD
Sbjct: 241 EIELKKREEKAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLNGELDD 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMAATLA 307
>gi|295395219|ref|ZP_06805427.1| peptide chain release factor RF2 [Brevibacterium mcbrellneri ATCC
49030]
gi|294971981|gb|EFG47848.1| peptide chain release factor RF2 [Brevibacterium mcbrellneri ATCC
49030]
Length = 376
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 154/356 (43%), Positives = 227/356 (63%), Gaps = 6/356 (1%)
Query: 84 DWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
D+ S A++ Q+ I++ + L + L+ P+LWDDP A I+ + G
Sbjct: 4 DFPSEIASLQQTFSSIREVSDVEQLKSEVAELTEAAAAPDLWDDPDVAQAITSKLSHKQG 63
Query: 144 KMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDP 203
+++++ F+Q + + ++ + +E D + E+ + ++ + E+ LLSGE D
Sbjct: 64 TLEKLQKFDQRIEDVELLVSMGEDEGDEDALNEAAAEVEKLKSELAALEISTLLSGEFDE 123
Query: 204 CSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDG 263
S I V+AGAGG ++ DWA M+ +MY WA+ RGY+V +D E AG+K AT++V+
Sbjct: 124 RSAVITVRAGAGGDDATDWAQMLTRMYIRWAENRGYKVEELDTSYAEGAGVKSATVQVNA 183
Query: 264 EYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERF 323
YA+G E G HRLVRISPFD+ RR TSFAAV V+P + + H+ I+E+DLRI+ F
Sbjct: 184 PYAYGTLSVEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLI-EQTDHIDIDENDLRIDVF 242
Query: 324 RSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQA 383
RS G GGQ NTTDSAVRI H+PTG+ + QNE+SQ QN+A+AM VLQSR+ QL ++
Sbjct: 243 RSSGPGGQSVNTTDSAVRITHVPTGVVVSMQNEKSQIQNRAAAMRVLQSRLLQL---KRE 299
Query: 384 QMNAEHTQSLTDI--SWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
+ A+ DI SWG+Q+R+YV HPY+MVKDLRT YEV++P +V +GD+D F+
Sbjct: 300 EEEAQKKDLAGDIKASWGDQMRSYVTHPYQMVKDLRTGYEVNNPQAVFDGDIDDFL 355
>gi|50086456|ref|YP_047966.1| peptide chain release factor 2 [Acinetobacter sp. ADP1]
gi|49532432|emb|CAG70144.1| peptide chain release factor 2 [Acinetobacter sp. ADP1]
Length = 337
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 151/335 (45%), Positives = 217/335 (64%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL + EL P +W+D A +++E G L + + ++L + M+ LA E +D
Sbjct: 5 RLEEVLRELEDPAIWNDQSRAQAMAKEKGELENVLNVLDNLAEQLEDAKAMLDLAVEADD 64
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
L ++ L T + + E + S +DP CY+E+QAG+GGTE+ DWASM+L+MY
Sbjct: 65 ESLLVDVESELATAEDELAKLEFRRMFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMY 124
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
W +R G++ LM+E G++AGIK ATI+V+GEYA+G+ + E GVHRLVR SPFDSG R
Sbjct: 125 MRWIERHGFKAELMEESDGDVAGIKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNR 184
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSF+AV V P D + ++IN +D+R + +R+ GAGGQH N TDSAVR+ H PTGI
Sbjct: 185 RHTSFSAVFVSPEI-DDNIEIEINPADVRTDTYRASGAGGQHINKTDSAVRLTHAPTGIV 243
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH N+ A L++++ +LE++++ + S +DI WG+QIR+YVL
Sbjct: 244 VACQNQRSQHANRDHAWKQLRAKLYELEMSKRNEAAQALEDSKSDIGWGSQIRSYVLDDS 303
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E S+ +VL+GDLD FI + L L
Sbjct: 304 R-IKDLRTGVENSNTGAVLDGDLDKFIEASLKQGL 337
>gi|385239982|ref|YP_005807824.1| peptide chain release factor 2 [Chlamydia trachomatis G/9768]
gi|385242760|ref|YP_005810599.1| peptide chain release factor 2 [Chlamydia trachomatis G/9301]
gi|385246369|ref|YP_005815191.1| peptide chain release factor 2 [Chlamydia trachomatis G/11074]
gi|296435987|gb|ADH18161.1| peptide chain release factor 2 [Chlamydia trachomatis G/9768]
gi|296437848|gb|ADH20009.1| peptide chain release factor 2 [Chlamydia trachomatis G/11074]
gi|297140348|gb|ADH97106.1| peptide chain release factor 2 [Chlamydia trachomatis G/9301]
Length = 334
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 152/323 (47%), Positives = 206/323 (63%), Gaps = 10/323 (3%)
Query: 124 LWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREE----NDTELELESLE 179
WDD V AG+IS L ++ E EL + I+ E+ D E++ E +
Sbjct: 10 FWDDVVRAGKISERIARLKQQLSEF----NELKNKVSAIQFFLEDEESSKDLEMQKELEK 65
Query: 180 ALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGY 239
+ +K E E LLSGELD SC++ + AGAGGTES DW M+L+MY WA +
Sbjct: 66 EFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMLLRMYMRWASSHSW 125
Query: 240 RVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVA 299
R+ ++D + GE+AGIK T+K+ GEYA+GYAKAE GVHRLVRISPFDS +RHTSFA+V
Sbjct: 126 RIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHTSFASVE 185
Query: 300 VIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQ 359
V P D V+I D+RI+ +RS GAGGQH N TDSAVRI H PTGI +CQNERSQ
Sbjct: 186 VFPEI-DDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSCQNERSQ 244
Query: 360 HQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTN 419
QN+ + M +L +R+ Q + + + ++ ++SWG+QIR YV PY +VKD+RT
Sbjct: 245 IQNREACMNMLCARIYQKLLQERLEKQNIDRKNKKEVSWGSQIRNYVFQPYTLVKDVRTG 304
Query: 420 YEVSDPDSVLEGD-LDGFILSYL 441
YEV + ++++G+ LD FI +YL
Sbjct: 305 YEVGNIQAMMDGELLDAFIKAYL 327
>gi|365156912|ref|ZP_09353199.1| peptide chain release factor 2 [Bacillus smithii 7_3_47FAA]
gi|363626379|gb|EHL77369.1| peptide chain release factor 2 [Bacillus smithii 7_3_47FAA]
Length = 327
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 153/326 (46%), Positives = 210/326 (64%), Gaps = 3/326 (0%)
Query: 121 KPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMI-KLAREENDTELELESLE 179
+P+ W+D A I E L + E K E E++D+ L +EENDTEL+ E
Sbjct: 3 QPDFWNDQQKAQAIINEANGLKDLVNEYKDL-LETQENLDLTYDLVKEENDTELKAELES 61
Query: 180 ALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGY 239
L ++ EL+ LLS D + +E+ GAGGTES DW SM+L+MY WA+++GY
Sbjct: 62 ELEDFTKRLNRYELELLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKKGY 121
Query: 240 RVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVA 299
+V +D +PG+ AGIK T+ + G A+GY KAE GVHRLVRISPFDS RRHTSF +
Sbjct: 122 KVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCD 181
Query: 300 VIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQ 359
V+P + ++I DL+I+ +RS GAGGQH NTTDSAVRI H+PTGI TCQ+ERSQ
Sbjct: 182 VMPEFNE-EVEIEIRNEDLKIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVVTCQSERSQ 240
Query: 360 HQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTN 419
QN+ AM +L++++ Q ++ Q + AE +I WG+QIR+YV HPY MVKD RTN
Sbjct: 241 IQNRERAMNMLKAKLYQKKLEEQEKELAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRTN 300
Query: 420 YEVSDPDSVLEGDLDGFILSYLSASL 445
E + +V++G++D FI +YL + L
Sbjct: 301 TETGNVQAVMDGEIDMFIDAYLRSRL 326
>gi|376256646|ref|YP_005144537.1| peptide chain release factor 2 [Corynebacterium diphtheriae VA01]
gi|372119163|gb|AEX82897.1| peptide chain release factor 2 [Corynebacterium diphtheriae VA01]
Length = 369
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 158/355 (44%), Positives = 227/355 (63%), Gaps = 9/355 (2%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
+S + ++ I+K + ++L R+ L + + P LWDDP A +++ E S+ K+
Sbjct: 6 QSAVTQLDSTLTTIEKVMNPEDLESRVRELEQQASDPTLWDDPDTAQKVTTELSSVQAKL 65
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
K++ Q + + M +LA EE + L L E L + + E+ +LSGE D
Sbjct: 66 KKLSTLRQRIDDLPVMYELADEEGEDALALAD-EELAELTADVEALEVKTMLSGEYDSRE 124
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
I +++GAGG ++ DWA M+++MY WA++ ++V + D E AGIK AT V GEY
Sbjct: 125 AVINIRSGAGGVDAADWAEMLMRMYTRWAEKNDHKVDIYDISYAEEAGIKSATFVVHGEY 184
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
+G E G HRLVRISPFD+ RR TSFA + V+P + + H+ I +S++R++ +RS
Sbjct: 185 MYGQLSVEQGAHRLVRISPFDNQGRRQTSFAEIEVLPVV-EQTDHIDIPDSEVRVDVYRS 243
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ--- 382
G GGQ NTTDSAVR+ HIPTGI TCQNE+SQ QNKASAM VLQ+++ LE RQ
Sbjct: 244 SGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMCVLQAKL--LERKRQEER 301
Query: 383 AQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
A+++A + + SWGNQ+R+YVLHPY+MVKDLRTNYEV+DP VL+GD+DG +
Sbjct: 302 AELDA--LGAGGNASWGNQMRSYVLHPYQMVKDLRTNYEVNDPQKVLDGDIDGLL 354
>gi|330839015|ref|YP_004413595.1| Peptide chain release factor 2 [Selenomonas sputigena ATCC 35185]
gi|329746779|gb|AEC00136.1| Peptide chain release factor 2 [Selenomonas sputigena ATCC 35185]
Length = 368
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 152/363 (41%), Positives = 226/363 (62%), Gaps = 7/363 (1%)
Query: 84 DWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
DWK A+ ++ + L ++ L ++ +P WD+ A +I++E ++ G
Sbjct: 4 DWKPEILAMQAKLKEMGDSLDVARKEEKIAELEYKMGEPTFWDNAEEAQKINQELAAIKG 63
Query: 144 KMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDP 203
+ + K + + ++++A EENDT LE E T++ +E EL+ LLSG D
Sbjct: 64 SVDKYKEIVSKTDDAQALLEMALEENDTSLEPEVQTEFETIKTAVRELELEVLLSGPYDA 123
Query: 204 CSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDG 263
+ + + AGAGGTE+ DW M+L+MY WA+R G+ V D +PG+ AG+K AT+ ++G
Sbjct: 124 NNAILTLHAGAGGTEAQDWTQMLLRMYGRWAERHGFSVVTADLLPGDEAGVKSATLFING 183
Query: 264 EYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERF 323
A+GY K+E GVHRLVRISPFDS RRHTSF+A ++P D + V IN +D+R++ +
Sbjct: 184 HNAYGYLKSEKGVHRLVRISPFDSNARRHTSFSACDIMPEI-DDAVEVAINMADVRVDTY 242
Query: 324 RSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQA 383
R+ GAGGQH N T SAVR+ H+PTGI CQNERSQ QN+ M +L++++ +LE Q
Sbjct: 243 RASGAGGQHINKTSSAVRMTHMPTGIVVQCQNERSQLQNREQCMKMLRAKLFELE---QE 299
Query: 384 QMNAEHTQSLTD---ISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSY 440
+ AE + D I WG+QIR+YV PY MVKD+RT E + +V++GDLD FI ++
Sbjct: 300 KKEAEIQKLEGDQQKIEWGSQIRSYVFQPYTMVKDMRTGMETGNVQAVMDGDLDAFIEAF 359
Query: 441 LSA 443
L+A
Sbjct: 360 LAA 362
>gi|384219181|ref|YP_005610347.1| peptide chain release factor 2 [Bradyrhizobium japonicum USDA 6]
gi|354958080|dbj|BAL10759.1| peptide chain release factor 2 [Bradyrhizobium japonicum USDA 6]
Length = 322
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 154/307 (50%), Positives = 209/307 (68%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
+E SL + + EQEL + I MI+L E D + E+ AL +++++ +EL+A
Sbjct: 2 QERTSLEDSLSGIGKVEQELEDDIGMIELGEAEGDAGVVAEAEAALKSLKKEVARRELEA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+EV AGAGGTES DWA M+L+MY WA+ G++V ++E GE AGIK
Sbjct: 62 LLSGEADRFDSYLEVHAGAGGTESQDWAQMLLRMYTRWAETHGFKVEFLEESEGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI+V G A+G+ K E GVHRLVRISPFDS RRHTSF++V V P D S + I E
Sbjct: 122 SATIQVSGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQVFPVI-DDSIKIDIKE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD+R++ RSGGAGGQH N T+SAVR+ HIPTG+ CQ RSQH+N+A A +L++R+
Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
++E+ ++ + A + TDI WG+QIR+YVL PY+MVKDLRT + SD VL G+LD
Sbjct: 241 EIELKKREEKAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLNGELDD 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMAATLA 307
>gi|376250835|ref|YP_005137716.1| peptide chain release factor 2 [Corynebacterium diphtheriae HC03]
gi|372112339|gb|AEX78398.1| peptide chain release factor 2 [Corynebacterium diphtheriae HC03]
Length = 369
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 158/355 (44%), Positives = 227/355 (63%), Gaps = 9/355 (2%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
+S + ++ I+K + ++L R+ L + + P LWDDP A +++ E S+ K+
Sbjct: 6 QSAVTQLDSTLTTIEKVMNPEDLESRVRELEQQASDPTLWDDPDTAQKVTTELSSVQAKL 65
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
K++ Q + + M +LA EE + L L E L + + E+ +LSGE D
Sbjct: 66 KKLSTLRQRIDDLPVMYELADEEGEDALALAD-EELAELTADVEALEVKTMLSGEYDSRE 124
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
I +++GAGG ++ DWA M+++MY WA++ ++V + D E AGIK AT V GEY
Sbjct: 125 AVINIRSGAGGVDAADWAEMLMRMYTRWAEKNDHKVDIYDISYAEEAGIKSATFVVHGEY 184
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
+G E G HRLVRISPFD+ RR TSFA + V+P + + H+ I +S++R++ +RS
Sbjct: 185 MYGQLSVEQGAHRLVRISPFDNQGRRQTSFAEIEVLP-VVEQTDHIDIPDSEVRVDVYRS 243
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ--- 382
G GGQ NTTDSAVR+ HIPTGI TCQNE+SQ QNKASAM VLQ+++ LE RQ
Sbjct: 244 SGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKL--LERKRQEER 301
Query: 383 AQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
A+++A + + SWGNQ+R+YVLHPY+MVKDLRTNYEV+DP VL+GD+DG +
Sbjct: 302 AELDA--LGAGGNASWGNQMRSYVLHPYQMVKDLRTNYEVNDPQKVLDGDIDGLL 354
>gi|385810075|ref|YP_005846471.1| protein release subunit factor B [Ignavibacterium album JCM 16511]
gi|383802123|gb|AFH49203.1| Protein chain release factor B [Ignavibacterium album JCM 16511]
Length = 351
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 155/335 (46%), Positives = 221/335 (65%), Gaps = 1/335 (0%)
Query: 107 NLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAR 166
N ++ L + + W D A +I +E SL ++ K+ Q+ + I LA+
Sbjct: 12 NKEKKITELQKKSESSDFWTDQKSAQQILQEIKSLQSWVELWKSVHQKASAVEETILLAQ 71
Query: 167 EENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMV 226
E D E E + L + + +E E +LSG+ D +C + + +GAGGTE+ DWA M+
Sbjct: 72 MEEDESFEEEIDKELAELEKAIEEAEFKNMLSGKDDDKNCILTIHSGAGGTEAQDWAEML 131
Query: 227 LQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFD 286
L+MY W ++ GY++T++D + G+ AGIK AT++V+G +A+GY KAE GVHRLVRISPFD
Sbjct: 132 LRMYLRWGEKNGYKMTIIDMLEGDGAGIKSATVEVEGPFAYGYLKAENGVHRLVRISPFD 191
Query: 287 SGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIP 346
+ KRRHTSFA+V VIP D S ++IN +DL+I+ +RSGG GGQ+ N ++AVRI HIP
Sbjct: 192 ANKRRHTSFASVFVIPEI-DDSIEIEINPADLKIDTYRSGGKGGQNVNKVETAVRITHIP 250
Query: 347 TGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYV 406
TGI A CQ ERSQ QN+ +AM +L++R+ QLE+ +Q E +S I WG+QIR+YV
Sbjct: 251 TGIVAACQTERSQLQNRQNAMKLLKARLYQLELEKQKAEQEEIEKSKMKIEWGSQIRSYV 310
Query: 407 LHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
HPY MVKD RT+ E SD SV++G++D FI +YL
Sbjct: 311 FHPYNMVKDHRTDVETSDVQSVMDGEIDQFIKAYL 345
>gi|407769854|ref|ZP_11117227.1| peptide chain release factor 2 [Thalassospira xiamenensis M-5 = DSM
17429]
gi|407286998|gb|EKF12481.1| peptide chain release factor 2 [Thalassospira xiamenensis M-5 = DSM
17429]
Length = 321
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 150/288 (52%), Positives = 205/288 (71%), Gaps = 5/288 (1%)
Query: 149 KAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYI 208
KA QEL ++I +I+L E D + E+ + L +R + ++EL++LLSGE D Y+
Sbjct: 15 KALAQELEDNIGLIELGEAEGDADTVAEAEQGLRDIREIAAKRELESLLSGEADANDAYL 74
Query: 209 EVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFG 268
E+ AGAGGTE+ DWASM+ +MY WA+ +GY++ +++E GE AGIK T KV G A+G
Sbjct: 75 EIHAGAGGTEAQDWASMLARMYVRWAESKGYKLEMLEESDGEEAGIKSVTYKVTGHNAYG 134
Query: 269 YAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGA 328
+ K EVGVHRLVRISP+DS RRHTSF++ V P D ++++ + DLRI+ +R+ GA
Sbjct: 135 WLKNEVGVHRLVRISPYDSAARRHTSFSSCWVYPVI-DDDINIEVLDKDLRIDTYRASGA 193
Query: 329 GGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI-ARQAQMNA 387
GGQH N TDSAVRI HIPTGI A CQN+RSQH+N+ +AM +L++R+ + E+ R+A+ A
Sbjct: 194 GGQHVNRTDSAVRITHIPTGIVAQCQNDRSQHKNRDTAMKMLKARLYEAELQKREAEAQA 253
Query: 388 -EHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLD 434
E T+S DI WG+QIR+YVL PY+M+KDLRT E SD VL GDLD
Sbjct: 254 LEDTKS--DIGWGHQIRSYVLQPYQMIKDLRTGVETSDTQGVLNGDLD 299
>gi|152979178|ref|YP_001344807.1| peptide chain release factor 2 [Actinobacillus succinogenes 130Z]
gi|150840901|gb|ABR74872.1| peptide chain release factor 2 [Actinobacillus succinogenes 130Z]
Length = 335
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 150/335 (44%), Positives = 218/335 (65%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++AEL +P++W++P A + +E SL + +K +Q L + +++LA E D
Sbjct: 3 RLEEVNAELEQPDVWNEPEKAQALGKERSSLEAVVDTIKKLDQGLEDVDGLLELAVEGED 62
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
E E++ L + ++ + E + SGE D C CY+++QAG+GGTE+ DW M+L+MY
Sbjct: 63 QETFDEAVAELDELEQQLAKLEFRRMFSGEHDACDCYVDLQAGSGGTEAQDWTEMLLRMY 122
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA+ +G++ LM+ G++AG+K AT+KV GEYAFG+ + E G+HRLVR SPFDS R
Sbjct: 123 LRWAESKGFKTELMEVSDGDVAGLKSATVKVSGEYAFGWLRTETGIHRLVRKSPFDSNNR 182
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSFAA V P + IN +DLRI+ +R+ GAGGQH N T+SAVRI HIP+GI
Sbjct: 183 RHTSFAAAFVYPEID-DDIDIDINPADLRIDVYRASGAGGQHVNRTESAVRITHIPSGIV 241
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+NK M L++++ ++E+ ++ S +DI WG+QIR+YVL
Sbjct: 242 VQCQNDRSQHKNKDQCMKQLKAKLYEMELQKKNADKQALEDSKSDIGWGSQIRSYVLDDS 301
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E + +VL+GDLD FI + L A L
Sbjct: 302 R-IKDLRTGVENRNTQAVLDGDLDRFIEASLKAGL 335
>gi|220932479|ref|YP_002509387.1| peptide chain release factor 2 [Halothermothrix orenii H 168]
gi|219993789|gb|ACL70392.1| bacterial peptide chain release factor 2 (bRF-2) [Halothermothrix
orenii H 168]
Length = 331
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 154/326 (47%), Positives = 209/326 (64%), Gaps = 2/326 (0%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLARE-ENDTELELES 177
++ P LWDD A I+R+ + ++K +K ++ E MI+LA E E + EL E
Sbjct: 1 MSDPGLWDDNKKAREITRKSKVVKDRIKSLKKLDELREEAEVMIELAEEDETNRELWSEV 60
Query: 178 LEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRR 237
+ + ++ K + EL L+GE D C+ + + GAGGTES DWA M+L+MY WA+
Sbjct: 61 EDYINSLEEKIDKMELKFRLNGEYDDCNAILSIHPGAGGTESQDWADMLLRMYVRWAESH 120
Query: 238 GYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAA 297
GY+V +D +PG+ AGIKR T+ + GEY++GY K E GVHRLVRISPFDS RRHTSFA+
Sbjct: 121 GYKVETLDYLPGDEAGIKRVTLLISGEYSYGYLKGEKGVHRLVRISPFDSSGRRHTSFAS 180
Query: 298 VAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNER 357
V VIP D DL+IE +R+ GAGGQH N TDSAVRI HIPTGI CQNER
Sbjct: 181 VNVIPEIDDDIEVDIDT-GDLKIETYRASGAGGQHVNKTDSAVRITHIPTGIVVQCQNER 239
Query: 358 SQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLR 417
SQH+NK AM +L++R+ +L+ +A+ E +I+WGNQIR+YV HPY ++KD R
Sbjct: 240 SQHKNKKMAMMILKARLLELKKEARAEKIEELRGENKEIAWGNQIRSYVFHPYNLIKDHR 299
Query: 418 TNYEVSDPDSVLEGDLDGFILSYLSA 443
T E + V++G +D FI +YL
Sbjct: 300 TGLEEGNVQKVMDGYIDEFIEAYLKT 325
>gi|308271179|emb|CBX27788.1| Peptide chain release factor 2 [uncultured Desulfobacterium sp.]
Length = 344
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 149/331 (45%), Positives = 215/331 (64%), Gaps = 1/331 (0%)
Query: 107 NLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAR 166
N RLN + ++K N W++ A + +E + GK++ K+ ++L E + LA
Sbjct: 6 NKEKRLNEIEFLISKDNFWENHDKATPLLKERTFISGKVESFKSLLKDLEECEILYSLAI 65
Query: 167 EENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMV 226
EE+D++ E + ++ K + L +L GE D + + + AGAGGTE+ DW+ ++
Sbjct: 66 EESDSKTIEEVSVQIQKLKEKINKLSLLLMLDGEDDINNAIVSINAGAGGTEAQDWSEIL 125
Query: 227 LQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFD 286
+MY W +++G++ T++D PG+ AGIK TI V+G+YA+GY K E+GVHRLVRISPF+
Sbjct: 126 FRMYSRWIEKKGFKSTIIDFQPGDEAGIKSVTITVEGDYAYGYLKTEIGVHRLVRISPFN 185
Query: 287 SGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIP 346
+ +RHTSFA+V V P D+S + I+E DLRI+ FRS GAGGQH N T SA+RI H+P
Sbjct: 186 ANGKRHTSFASVFVYPEL-DNSIEIDIDEKDLRIDIFRSSGAGGQHVNKTSSAIRITHLP 244
Query: 347 TGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYV 406
TGI CQ ERSQH+NK AM VL+SR+ QLE +Q E +I+WGNQIR+YV
Sbjct: 245 TGIVVQCQQERSQHKNKDMAMSVLKSRLYQLEKQKQDDKMQEIHDGKDEIAWGNQIRSYV 304
Query: 407 LHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
LHPY+++KD R N E + +VL+G +D FI
Sbjct: 305 LHPYQLIKDHRINLETGNAAAVLDGAIDPFI 335
>gi|452943243|ref|YP_007499408.1| peptide chain release factor 2 [Hydrogenobaculum sp. HO]
gi|452881661|gb|AGG14365.1| peptide chain release factor 2 [Hydrogenobaculum sp. HO]
Length = 375
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 155/359 (43%), Positives = 228/359 (63%), Gaps = 13/359 (3%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNK-------PNLWDDPVHAGRISREHGSLMGK 144
I + IKKR + + ++ + E+ K P+ W D A IS++ +L K
Sbjct: 4 IVSNFSDIKKRFEELSSSIDEEKIRKEIEKYDQMMSEPDFWSDQEKAKSISQKRKALQDK 63
Query: 145 MKEVKAFEQELLEHIDMIKLAREEN-DTELEL-ESLEALLTMRRKSKEKELDALLSGELD 202
+ + + + + +M+ +EE+ DT L + E LEA+ + K+ EL+ LS E+D
Sbjct: 64 LNTYTSLKSRIKDLDEMVSELKEEDLDTTLLISEELEAV---EKDLKKFELETYLSDEMD 120
Query: 203 PCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVD 262
+ Y+ +QAGAGGTE+ DWASM+L+MY WA++ GY V L D P ++AGIK AT+ +
Sbjct: 121 INNAYLTIQAGAGGTEACDWASMLLRMYTRWAEKHGYEVQLTDINPDDVAGIKSATLYIK 180
Query: 263 GEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIER 322
G YA+GY K+E GVHRLVRISPFD+ RRHTSFA+V V+P + +++I E DLRI+
Sbjct: 181 GPYAYGYLKSENGVHRLVRISPFDANARRHTSFASVLVVPEVNE-DVNIEIKEEDLRIDT 239
Query: 323 FRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ 382
+R+ GAGGQ+ N TD+AVRI HIPTGI CQ ERSQ QN+ AM +L++R+ QLE+ +
Sbjct: 240 YRASGAGGQYVNKTDTAVRITHIPTGIVVACQQERSQIQNRRKAMEMLKARLYQLELQKI 299
Query: 383 AQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
+ TDI WG +IR+Y+ P ++VKDLRT E + ++V++G++D FI +YL
Sbjct: 300 EEKKKSLEGPKTDIGWGYKIRSYIFQPSQLVKDLRTGEESGNIEAVMDGEIDNFIEAYL 358
>gi|256762748|ref|ZP_05503328.1| peptide chain release factor 2 [Enterococcus faecalis T3]
gi|257079206|ref|ZP_05573567.1| peptide chain release factor 2 [Enterococcus faecalis JH1]
gi|294779419|ref|ZP_06744820.1| peptide chain release factor 2 [Enterococcus faecalis PC1.1]
gi|307269575|ref|ZP_07550914.1| peptide chain release factor 2 [Enterococcus faecalis TX4248]
gi|307289302|ref|ZP_07569258.1| peptide chain release factor 2 [Enterococcus faecalis TX0109]
gi|397700070|ref|YP_006537858.1| peptide chain release factor 2 [Enterococcus faecalis D32]
gi|422695176|ref|ZP_16753164.1| peptide chain release factor 2 [Enterococcus faecalis TX4244]
gi|422704670|ref|ZP_16762480.1| peptide chain release factor 2 [Enterococcus faecalis TX1302]
gi|256683999|gb|EEU23694.1| peptide chain release factor 2 [Enterococcus faecalis T3]
gi|256987236|gb|EEU74538.1| peptide chain release factor 2 [Enterococcus faecalis JH1]
gi|294453548|gb|EFG21949.1| peptide chain release factor 2 [Enterococcus faecalis PC1.1]
gi|306500011|gb|EFM69372.1| peptide chain release factor 2 [Enterococcus faecalis TX0109]
gi|306514195|gb|EFM82771.1| peptide chain release factor 2 [Enterococcus faecalis TX4248]
gi|315147459|gb|EFT91475.1| peptide chain release factor 2 [Enterococcus faecalis TX4244]
gi|315163916|gb|EFU07933.1| peptide chain release factor 2 [Enterococcus faecalis TX1302]
gi|397336709|gb|AFO44381.1| peptide chain release factor 2 [Enterococcus faecalis D32]
Length = 327
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 151/327 (46%), Positives = 209/327 (63%), Gaps = 1/327 (0%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
+ +P WD+ A ++ E SL K ++ +EL E M +L +EE DTE++ E
Sbjct: 1 MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDTEIQEELE 60
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
E + ++ + EL LL+ D + IE+ GAGGTES DW SM+L+MY WA+ G
Sbjct: 61 ERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHG 120
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
++V +D G+ AGIK T+ + G A+GY K+E GVHRLVRISPFDS KRRHTSF +V
Sbjct: 121 FQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
V+P D + + IN DL+I+ +R+ GAGGQH N T+SAVRI HIPTG Q +RS
Sbjct: 181 DVMPEL-DDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRS 239
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
Q +N+ AM +L++++ QLE+ ++AQ A +I WG+QIR+YV HPY MVKD RT
Sbjct: 240 QLKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRT 299
Query: 419 NYEVSDPDSVLEGDLDGFILSYLSASL 445
NYE + +V++GDLDGFI +YL L
Sbjct: 300 NYETGNVQAVMDGDLDGFIDAYLKQRL 326
>gi|374601529|ref|ZP_09674529.1| peptide chain release factor 2 [Paenibacillus dendritiformis C454]
gi|374392864|gb|EHQ64186.1| peptide chain release factor 2 [Paenibacillus dendritiformis C454]
Length = 340
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 149/324 (45%), Positives = 212/324 (65%), Gaps = 1/324 (0%)
Query: 118 ELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELES 177
+++ P+ WDD A I E ++ G ++E +Q+ + M++LA EEND L E
Sbjct: 8 KMSAPDFWDDNERAQGIISELNAIKGIVEEYSKLQQDHEDTQMMLELADEENDEGLAQEL 67
Query: 178 LEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRR 237
+++ + + ++ EL LLS D + +E+ GAGGTES DW M+L+MY WA++R
Sbjct: 68 ADSVKQLYERVEQFELQLLLSEPYDKMNAILELHPGAGGTESQDWGQMLLRMYTRWAEQR 127
Query: 238 GYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAA 297
G++V ++D +PG+ AGIK T+ + G A+GY KAE GVHRLVRISPFDS RRHTSF +
Sbjct: 128 GFKVEVLDYLPGDEAGIKSVTLLIKGYNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 187
Query: 298 VAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNER 357
V+P D +++ DL+I+ +R+ GAGGQH NTTDSAVRI HIPTGI TCQ ER
Sbjct: 188 CDVVPEITD-DVDIEVRTEDLKIDTYRASGAGGQHINTTDSAVRITHIPTGIVVTCQTER 246
Query: 358 SQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLR 417
SQ +N+ AM +L+S++ + +I Q + AE DI+WG+QIR+YV HPY MVKD R
Sbjct: 247 SQIKNRERAMTLLRSKLYERKIEEQQKQLAEIRGDQMDIAWGSQIRSYVFHPYSMVKDHR 306
Query: 418 TNYEVSDPDSVLEGDLDGFILSYL 441
T E + +V++GD+D FI +YL
Sbjct: 307 TQVETGNVGAVMDGDIDEFIEAYL 330
>gi|312796706|ref|YP_004029628.1| peptide chain release factor 2 (RF-2) [Burkholderia rhizoxinica HKI
454]
gi|312168481|emb|CBW75484.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Burkholderia
rhizoxinica HKI 454]
Length = 320
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 148/322 (45%), Positives = 214/322 (66%), Gaps = 6/322 (1%)
Query: 124 LWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLT 183
+W D A + RE L ++ + A +L + ++ +LA EE D + L +
Sbjct: 1 MWSDSKQAQALGREKKLLDAVVQMLSALNGDLTDTQELFELASEEQDDDTLLACERDVQA 60
Query: 184 MRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTL 243
+ R+ + E + + DP +C++++QAGAGGTE+ DWASM+L+ Y + +R+G++ +
Sbjct: 61 LERRVADIEFRRMFNNPADPNNCFVDIQAGAGGTEAQDWASMLLRQYLRYCERKGFKAEV 120
Query: 244 MDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPN 303
+++ GE+AGIK ATIKV+GEYA+GY + E G+HRLVR SPFDS RHTSF++V V P
Sbjct: 121 LEQSDGEVAGIKNATIKVEGEYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPE 180
Query: 304 SGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNK 363
D S + +N +DLRI+ FR+ GAGGQH N TDSAVRI H+P+GI CQN+RSQH+N+
Sbjct: 181 V-DESIDIDVNPADLRIDTFRASGAGGQHINKTDSAVRITHLPSGIVVQCQNDRSQHRNR 239
Query: 364 ASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVS 423
A AM +L+SR+ + E+ ++ + S TD+ WG+QIR+YVL R VKDLRTN E+S
Sbjct: 240 AEAMAMLKSRLYEAEMRKRQAEQDKLESSKTDVGWGHQIRSYVLDQSR-VKDLRTNVEIS 298
Query: 424 DPDSVLEGDLDGFILSYLSASL 445
+ +VL+GDLD FI SASL
Sbjct: 299 NTRAVLDGDLDDFI----SASL 316
>gi|425735918|ref|ZP_18854229.1| peptide chain release factor 2 [Brevibacterium casei S18]
gi|425479152|gb|EKU46332.1| peptide chain release factor 2 [Brevibacterium casei S18]
Length = 372
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 159/356 (44%), Positives = 229/356 (64%), Gaps = 6/356 (1%)
Query: 84 DWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
D S A + Q+ Q I L + L+ E + P+ WDDP A + S + G
Sbjct: 5 DHASEIANLRQTYQAILDVSDLPTLRDEVAELTEEASAPSFWDDPDSAQKTSAKLSHKQG 64
Query: 144 KMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDP 203
+++++ F + + + +I+++ E D++ +E+ + ++ + E E+ LLSGE D
Sbjct: 65 TLEKLEKFGERIDDAELLIEMSEAEGDSDSLVEAERDIAKLKDQLSELEISTLLSGEYDE 124
Query: 204 CSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDG 263
S + V++GAGG ++ DWA M+++MY WA+ RGY V +D E AGIK ATI+V+
Sbjct: 125 RSAVVTVRSGAGGDDATDWAQMLIRMYIRWAEGRGYNVQELDTSYAEGAGIKSATIQVNA 184
Query: 264 EYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERF 323
YA+G E G HRLVRISPFD+ RR TSFAAV V+P +S+ H++++E+DLRI+ +
Sbjct: 185 PYAYGTLSVEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLI-ESTDHIEVDENDLRIDVY 243
Query: 324 RSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQA 383
RS G GGQ NTTDSAVRI HIPTG+ + QNE+SQ QN+ +AM VLQSR+ LE RQ
Sbjct: 244 RSSGPGGQSVNTTDSAVRITHIPTGVVVSMQNEKSQIQNREAAMRVLQSRL--LERKRQE 301
Query: 384 QMNAEHTQSLTDI--SWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
+ A+ + DI SWG+Q+R+YV HPY+MVKDLRT YEV++P +V +GDLDG I
Sbjct: 302 EA-AQKKELAGDIKASWGDQMRSYVTHPYQMVKDLRTGYEVNNPQAVFDGDLDGLI 356
>gi|40063231|gb|AAR38058.1| peptide chain release factor 2 [uncultured marine bacterium 577]
Length = 359
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 144/321 (44%), Positives = 216/321 (67%), Gaps = 4/321 (1%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEA- 180
P +W D A + RE L + ++ + +L + ID+ ++A+EEND + LES+ A
Sbjct: 38 PEIWKDSKRAQELGREKKILDKIVLTLETIKLQLQDSIDLFQMAKEENDIVV-LESIRAD 96
Query: 181 LLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYR 240
+ E + S +DP +C++E+Q+G+GGTE+ DWA+M+ +MY + +RR Y+
Sbjct: 97 AAKLETNVANMEFCNMFSNPMDPNNCFLEIQSGSGGTEAQDWAAMLERMYLRYCERRDYK 156
Query: 241 VTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAV 300
V +++E GE+AGIK A++K+ G+YA+GY + E G+HRLVR SPFDSG RRHTSFA+V +
Sbjct: 157 VEVLEESSGEVAGIKSASLKISGDYAYGYLRTESGIHRLVRKSPFDSGSRRHTSFASVFI 216
Query: 301 IPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQH 360
P D + ++IN +DLR++ +R+ GAGGQH N TDSA+RI H P+GI +CQN+RSQH
Sbjct: 217 YPEV-DDTIEIEINPADLRVDTYRASGAGGQHINKTDSAIRITHNPSGIVVSCQNDRSQH 275
Query: 361 QNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNY 420
+N+A AM +L+SR+ ++E+ +Q+ S TDI WG+QIR+YVL R +KDLRT
Sbjct: 276 RNRAEAMAMLKSRLYEVELRKQSDEKQAMEDSKTDIGWGHQIRSYVLDQSR-IKDLRTGL 334
Query: 421 EVSDPDSVLEGDLDGFILSYL 441
E+ + VL+G LD FI + L
Sbjct: 335 EIGNTQGVLDGGLDEFIKTSL 355
>gi|419802549|ref|ZP_14327735.1| peptide chain release factor 2 [Haemophilus parainfluenzae HK262]
gi|385190109|gb|EIF37559.1| peptide chain release factor 2 [Haemophilus parainfluenzae HK262]
Length = 364
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 151/335 (45%), Positives = 220/335 (65%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++AEL +P++W++P A + +E SL + +K EQ L + +++LA E D
Sbjct: 32 RLEEVNAELEQPDVWNEPEKAQALGKERVSLEQVVDTIKNLEQGLEDVEGLLELAVEAED 91
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
E E++ L + ++ + E + SGE D C CY+++QAG+GGTE+ DW M+L+MY
Sbjct: 92 EETFSEAVAELDELEQQLAKLEFRRMFSGEHDACDCYVDLQAGSGGTEAQDWTEMLLRMY 151
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA+ +G++ LM+ G++AG+K ATI+V GEYAFG+ + E G+HRLVR SPFDS R
Sbjct: 152 LRWAESKGFKTELMEVSDGDVAGLKSATIRVSGEYAFGWLRTETGIHRLVRKSPFDSNNR 211
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSFAA V P ++IN +DLRI+ +R+ GAGGQH N T+SAVRI H+P+GI
Sbjct: 212 RHTSFAAAFVYPEID-DDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHMPSGIV 270
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+NK AM L++++ +LE+ ++ + +DI WG+QIR+YVL
Sbjct: 271 VQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDIGWGSQIRSYVLDDA 330
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E + +VL+GDLD FI + L A L
Sbjct: 331 R-IKDLRTGVENRNTQAVLDGDLDRFIEASLKAGL 364
>gi|395778225|ref|ZP_10458737.1| peptide chain release factor 2 [Bartonella elizabethae Re6043vi]
gi|423715518|ref|ZP_17689742.1| peptide chain release factor 2 [Bartonella elizabethae F9251]
gi|395417433|gb|EJF83770.1| peptide chain release factor 2 [Bartonella elizabethae Re6043vi]
gi|395429645|gb|EJF95706.1| peptide chain release factor 2 [Bartonella elizabethae F9251]
Length = 322
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 152/307 (49%), Positives = 212/307 (69%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + + +F + L E I++I + EE+D E+ ++ ++ ++ + ++++D
Sbjct: 3 RERQRLDDSINGLLSFTKTLEECIELIAMGEEESDVEVIADAENSIRNLKSEIDKRQIDV 62
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE DP Y+EV AGAGGTES DWASM+L+MY WA++ +V +++ GE AGIK
Sbjct: 63 LLSGEADPNDTYLEVHAGAGGTESQDWASMLLRMYMRWAEQHEMKVEVLEIHDGEEAGIK 122
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI V G A+G K E GVHRLVRISPFDS +RHTSFA++ V P D V ++E
Sbjct: 123 SATILVKGHNAYGLLKTESGVHRLVRISPFDSNAKRHTSFASIWVYP-VIDDDIEVDVSE 181
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
+D+RI+ +R+ GAGGQH NTTDSAVRI HI TGI CQ ERSQH+N+A+A +L++R+
Sbjct: 182 ADVRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNRATAWSMLRARLY 241
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ ++ + N+ S TDI WG+QIR+YVL PY++VKDLRT E +DP SVL G+LD
Sbjct: 242 EEELKKREEENSAVESSKTDIGWGHQIRSYVLQPYQLVKDLRTGIENTDPQSVLNGNLDA 301
Query: 436 FILSYLS 442
FI + LS
Sbjct: 302 FIEAALS 308
>gi|188582408|ref|YP_001925853.1| peptide chain release factor 2 [Methylobacterium populi BJ001]
gi|179345906|gb|ACB81318.1| peptide chain release factor 2 [Methylobacterium populi BJ001]
Length = 321
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 153/308 (49%), Positives = 209/308 (67%), Gaps = 3/308 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + +K EQ+L + +I+L E D E A+ + +++ ++++
Sbjct: 2 RERQELDEAVTAIKKLEQDLEDAATLIELGEMEGDQASITEGENAIKAVEKEAASRQVET 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+EV AGAGGTES DWA+M+ +MY WA+RR ++V +++ GE AGIK
Sbjct: 62 LLSGEADGFDTYLEVHAGAGGTESQDWANMLQRMYARWAERRKFKVEIVEMTDGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
AT+ + G A+G+ K E GVHRLVRISP+DS RRHTSFA+V V P D ++I E
Sbjct: 122 GATLLIKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFASVWVYPVI-DDRIEIEIKE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD RI+ +RS GAGGQH NTTDSAVRI H PTGI CQ ERSQH+N+A+A +L++R+
Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAVRITHNPTGIVVACQQERSQHKNRATAWNMLRARLY 240
Query: 376 QLEI-ARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLD 434
+ E+ R+ + NAE S TDI WG+QIR+YVL PY++VKDLRT + +DPD VL+GDLD
Sbjct: 241 EAELKKREEKANAE-AASKTDIGWGHQIRSYVLQPYQLVKDLRTGTQSTDPDEVLDGDLD 299
Query: 435 GFILSYLS 442
F+ + L+
Sbjct: 300 PFMEASLA 307
>gi|315924849|ref|ZP_07921066.1| peptide chain release factor RF2 [Pseudoramibacter alactolyticus
ATCC 23263]
gi|315621748|gb|EFV01712.1| peptide chain release factor RF2 [Pseudoramibacter alactolyticus
ATCC 23263]
Length = 369
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 153/342 (44%), Positives = 217/342 (63%), Gaps = 4/342 (1%)
Query: 96 IQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQEL 155
+ + K + ++ RL+ L + P W+D A ++ +E L K ++EL
Sbjct: 18 LTALGKSMDLPAIDARLSALMTQSEDPAFWNDQKSAQKVLKEQTILKRKRSRYDEVKEEL 77
Query: 156 LEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAG 215
+ M +LA EE + ELE + L + K ++ +L+ LLSGE D + I + GAG
Sbjct: 78 DDVSVMYELA-EEGEGMDELEQM--LGAFQEKFEDFKLEMLLSGEYDSNNAIISLHPGAG 134
Query: 216 GTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVG 275
GTES DWASM+L+MY WA+ RGY++ +D PG+IAGIK AT+ ++G A+GY K E G
Sbjct: 135 GTESHDWASMLLRMYTRWAEARGYKIKQLDYQPGDIAGIKSATLLIEGINAYGYLKTERG 194
Query: 276 VHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANT 335
VHRLVRISPFDS RRHTSFA++ V P D S ++IN D+R++ +RS GAGGQH N
Sbjct: 195 VHRLVRISPFDSSGRRHTSFASLDVTPEV-DDSVEIEINPDDIRVDTYRSSGAGGQHVNK 253
Query: 336 TDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTD 395
T SA+RI H+PTG+ CQNERSQHQN+ AM +L+S++ ++ Q + + +
Sbjct: 254 TSSAIRITHLPTGVVVQCQNERSQHQNREVAMNMLKSKLVEIMAQEQKEKLEDVVGDYSQ 313
Query: 396 ISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
I+WG+QIR+YV HPY MVKD RT EV + +V++GDLD F+
Sbjct: 314 IAWGSQIRSYVFHPYTMVKDHRTGVEVGNIQTVMDGDLDRFM 355
>gi|422729707|ref|ZP_16786105.1| peptide chain release factor 2 [Enterococcus faecalis TX0012]
gi|315149827|gb|EFT93843.1| peptide chain release factor 2 [Enterococcus faecalis TX0012]
Length = 327
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 151/327 (46%), Positives = 209/327 (63%), Gaps = 1/327 (0%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
+ +P WD+ A ++ E SL K ++ +EL E M +L +EE D E++ E
Sbjct: 1 MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELE 60
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
E + ++ + EL LL+ D + IE+ GAGGTES DW SM+L+MY WA+ G
Sbjct: 61 ERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHG 120
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
++V +D G+ AGIK T+ + G A+GY K+E GVHRLVRISPFDS KRRHTSF +V
Sbjct: 121 FQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
V+P D + + IN DL+I+ +R+ GAGGQH N T+SAVRI HIPTG Q +RS
Sbjct: 181 DVMPEL-DDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRS 239
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
Q +N+ AM +L++++ QLE+ ++AQ A +ISWG+QIR+YV HPY MVKD RT
Sbjct: 240 QLKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEISWGSQIRSYVFHPYSMVKDHRT 299
Query: 419 NYEVSDPDSVLEGDLDGFILSYLSASL 445
NYE + +V++GDLDGFI +YL L
Sbjct: 300 NYETGNVQAVMDGDLDGFIDAYLKQRL 326
>gi|376248040|ref|YP_005139984.1| peptide chain release factor 2 [Corynebacterium diphtheriae HC04]
gi|372114608|gb|AEX80666.1| peptide chain release factor 2 [Corynebacterium diphtheriae HC04]
Length = 405
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 158/355 (44%), Positives = 227/355 (63%), Gaps = 9/355 (2%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
+S + ++ I+K + ++L R+ L + + P LWDDP A +++ E S+ K+
Sbjct: 26 QSAVTRLDSTLTTIEKVMNPEDLESRVRELEQQASDPTLWDDPDTAQKVTTELSSVQAKL 85
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
K++ Q + + M +LA EE + L L E L + + E+ +LSGE D
Sbjct: 86 KKLSTLRQRIDDLPVMYELADEEGEDALALAD-EELAELAADIEALEVKTMLSGEYDSRE 144
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
I +++GAGG ++ DWA M+++MY WA++ ++V + D E AGIK AT V GEY
Sbjct: 145 AVINIRSGAGGVDAADWAEMLMRMYTRWAEKNDHKVDIYDISYAEEAGIKSATFVVHGEY 204
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
+G E G HRLVRISPFD+ RR TSFA + V+P + + H+ I +S++R++ +RS
Sbjct: 205 MYGQLSVEQGAHRLVRISPFDNQGRRQTSFAEIEVLPVV-EQTDHIDIPDSEVRVDVYRS 263
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ--- 382
G GGQ NTTDSAVR+ HIPTGI TCQNE+SQ QNKASAM VLQ+++ LE RQ
Sbjct: 264 SGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKL--LERKRQEER 321
Query: 383 AQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
A+++A + + SWGNQ+R+YVLHPY+MVKDLRTNYEV+DP VL+GD+DG +
Sbjct: 322 AELDA--LGAGGNASWGNQMRSYVLHPYQMVKDLRTNYEVNDPQKVLDGDIDGLL 374
>gi|376242385|ref|YP_005133237.1| peptide chain release factor 2 [Corynebacterium diphtheriae CDCE
8392]
gi|372105627|gb|AEX71689.1| peptide chain release factor 2 [Corynebacterium diphtheriae CDCE
8392]
Length = 369
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 158/355 (44%), Positives = 227/355 (63%), Gaps = 9/355 (2%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
+S + ++ I+K + ++L R+ L + + P LWDDP A +++ E S+ K+
Sbjct: 6 QSAVTRLDSTLTTIEKVMNPEDLESRVRELEQQASDPTLWDDPDTAQKVTTELSSVQAKL 65
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
K++ Q + + M +LA EE + L L E L + + E+ +LSGE D
Sbjct: 66 KKLSTLRQRIDDLPVMYELADEEGEDALALAD-EELAELTADIEALEVKTMLSGEYDSRE 124
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
I +++GAGG ++ DWA M+++MY WA++ ++V + D E AGIK AT V GEY
Sbjct: 125 AVINIRSGAGGVDAADWAEMLMRMYTRWAEKNDHKVDIYDISYAEEAGIKSATFVVHGEY 184
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
+G E G HRLVRISPFD+ RR TSFA + V+P + + H+ I +S++R++ +RS
Sbjct: 185 MYGQLSVEQGAHRLVRISPFDNQGRRQTSFAEIEVLP-VVEQTDHIDIPDSEVRVDVYRS 243
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ--- 382
G GGQ NTTDSAVR+ HIPTGI TCQNE+SQ QNKASAM VLQ+++ LE RQ
Sbjct: 244 SGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKL--LERKRQEER 301
Query: 383 AQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
A+++A + + SWGNQ+R+YVLHPY+MVKDLRTNYEV+DP VL+GD+DG +
Sbjct: 302 AELDA--LGAGGNASWGNQMRSYVLHPYQMVKDLRTNYEVNDPQKVLDGDIDGLL 354
>gi|419860362|ref|ZP_14383006.1| peptide chain release factor 2 [Corynebacterium diphtheriae bv.
intermedius str. NCTC 5011]
gi|387983171|gb|EIK56662.1| peptide chain release factor 2 [Corynebacterium diphtheriae bv.
intermedius str. NCTC 5011]
Length = 369
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 158/355 (44%), Positives = 227/355 (63%), Gaps = 9/355 (2%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
+S + ++ I+K + ++L R+ L + + P LWDDP A +++ E S+ K+
Sbjct: 6 QSAVTQLDSTLTTIEKVMNPEDLESRVRELEQQASDPTLWDDPDTAQKVTTELSSVQAKL 65
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
K++ Q + + M +LA EE + L L E L + + E+ +LSGE D
Sbjct: 66 KKLSTLRQRIDDLPVMYELADEEGEDALALAD-EELAELAADIEALEVKTMLSGEYDSRE 124
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
I +++GAGG ++ DWA M+++MY WA++ ++V + D E AGIK AT V GEY
Sbjct: 125 AVINIRSGAGGVDAADWAEMLMRMYTRWAEKNDHKVDIYDISYAEEAGIKSATFVVHGEY 184
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
+G E G HRLVRISPFD+ RR TSFA + V+P + + H+ I +S++R++ +RS
Sbjct: 185 MYGQLSVEQGAHRLVRISPFDNQGRRQTSFAEIEVLP-VVEQTDHIDIPDSEVRVDVYRS 243
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ--- 382
G GGQ NTTDSAVR+ HIPTGI TCQNE+SQ QNKASAM VLQ+++ LE RQ
Sbjct: 244 SGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKL--LERKRQEER 301
Query: 383 AQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
A+++A + + SWGNQ+R+YVLHPY+MVKDLRTNYEV+DP VL+GD+DG +
Sbjct: 302 AELDA--LGAGGNASWGNQMRSYVLHPYQMVKDLRTNYEVNDPQKVLDGDIDGLL 354
>gi|296118845|ref|ZP_06837421.1| peptide chain release factor 2 [Corynebacterium ammoniagenes DSM
20306]
gi|295968334|gb|EFG81583.1| peptide chain release factor 2 [Corynebacterium ammoniagenes DSM
20306]
Length = 367
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 157/349 (44%), Positives = 227/349 (65%), Gaps = 11/349 (3%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
++ ++ I+K + + + R+ L A+ P+LWDDP HA +++ E S K++++ A
Sbjct: 12 LSATLTTIEKVMDPRAMEERVRELEAQAGDPSLWDDPDHAQKVTSELSSTQAKLRKLSAL 71
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
L + M +LA EE D L + L+A+ R + E+ +LSG+ D I ++
Sbjct: 72 RGRLEDLPVMYELAEEEGDASLADDELDAV---RDAVETLEVTTMLSGDYDQREAVINIR 128
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
+GAGG ++ DWA M+++MY WA++ G++V + D E AGIK AT V GEY +G
Sbjct: 129 SGAGGVDAADWAEMLMRMYTRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGEYMYGTLS 188
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
E G HRLVR+SPFD+ RR TSFA V V+P + + ++I +S++R++ +RS G GGQ
Sbjct: 189 VEQGAHRLVRLSPFDNQNRRQTSFAEVEVLPVV-EQTDSIEIPDSEVRVDVYRSSGPGGQ 247
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ---AQMNAE 388
NTTDSAVR+ H+PTGI TCQNE+SQ QNKASAM VLQ+++ LE RQ A+M+A
Sbjct: 248 SVNTTDSAVRLTHVPTGIMVTCQNEKSQIQNKASAMRVLQAKL--LERKRQEERAEMDA- 304
Query: 389 HTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
+ + SWGNQ+R+YVLHPY+MVKDLRTN+EV DP VL GD+D F+
Sbjct: 305 -LGAGGNASWGNQMRSYVLHPYQMVKDLRTNHEVGDPSKVLGGDIDDFL 352
>gi|195952400|ref|YP_002120690.1| peptide chain release factor 2 [Hydrogenobaculum sp. Y04AAS1]
gi|195932012|gb|ACG56712.1| peptide chain release factor 2 [Hydrogenobaculum sp. Y04AAS1]
Length = 375
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 148/325 (45%), Positives = 217/325 (66%), Gaps = 6/325 (1%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEN-DTELEL-E 176
+++P+ W D A IS++ +L K+ + + + + +M+ +EE+ DT L + E
Sbjct: 38 MSEPDFWSDQEKAKSISQKRKALQDKLNTYTSLKSRIKDLDEMVSELKEEDLDTTLLISE 97
Query: 177 SLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQR 236
LEA+ + K+ EL+ LS E+D + Y+ +QAGAGGTE+ DWASM+L+MY WA++
Sbjct: 98 ELEAV---EKDLKKFELETYLSDEMDINNAYLTIQAGAGGTEACDWASMLLRMYTRWAEK 154
Query: 237 RGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFA 296
GY V L D P ++AGIK AT+ + G YA+GY K+E GVHRLVRISPFD+ RRHTSFA
Sbjct: 155 HGYEVQLTDINPDDVAGIKSATLYIKGPYAYGYLKSENGVHRLVRISPFDANARRHTSFA 214
Query: 297 AVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNE 356
+V V+P + +++I E DLRI+ +R+ GAGGQ+ N TD+AVRI HIPTGI CQ E
Sbjct: 215 SVLVVPEVNE-DVNIEIKEEDLRIDTYRASGAGGQYVNKTDTAVRITHIPTGIVVACQQE 273
Query: 357 RSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDL 416
RSQ QN+ AM +L++R+ QLE+ + + TDI WG +IR+Y+ P ++VKDL
Sbjct: 274 RSQIQNRRKAMEMLKARLYQLELQKIEEKKKSLEGPKTDIGWGYKIRSYIFQPSQLVKDL 333
Query: 417 RTNYEVSDPDSVLEGDLDGFILSYL 441
RT E + ++V++G++D FI +YL
Sbjct: 334 RTGEESGNIEAVMDGEIDNFIEAYL 358
>gi|374611917|ref|ZP_09684700.1| peptide chain release factor 2 [Mycobacterium tusciae JS617]
gi|373548561|gb|EHP75252.1| peptide chain release factor 2 [Mycobacterium tusciae JS617]
Length = 371
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 156/358 (43%), Positives = 227/358 (63%), Gaps = 7/358 (1%)
Query: 84 DWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
D ++ AA+ ++ +++ L + L VR+ L E + PNLWDD A +++ E G
Sbjct: 4 DRQADIAALDSTLTTVERVLDVEGLRVRIEKLEHEASDPNLWDDQSRAQKVTSELSHTQG 63
Query: 144 KMKEVKAFEQELLEHIDMIKLAREENDT---ELELESLEALLTMRRKSKEKELDALLSGE 200
+++ V+ Q L + + ++A EE + E + E+ L +R + E+ LLSGE
Sbjct: 64 ELRRVEELRQRLDDLPVLYEMAAEEEGSGAAEAQAEADTELKKLREDLEAMEVRTLLSGE 123
Query: 201 LDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIK 260
D + +++GAGG ++ DWA M+++MY WA++ Y V + D E AGIK AT
Sbjct: 124 YDAREALLNIRSGAGGVDAADWAEMLMRMYVRWAEQHNYPVEVFDTSYAEEAGIKSATFA 183
Query: 261 VDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRI 320
V YA+G E G HRLVRISPFD+ RR TSFA V V+P + +++ H+ I E D+R+
Sbjct: 184 VHAPYAYGTLSVEQGTHRLVRISPFDNQGRRQTSFAEVEVLPVT-ETTDHIDIPEGDVRV 242
Query: 321 ERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSR-VNQLEI 379
+ +RS G GGQ NTTDSAVR+ HIPTGI TCQNE+SQ QNK SAM VLQ++ + + +
Sbjct: 243 DVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLERKRL 302
Query: 380 ARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
+A+M+A + SWGNQ+R+YVLHPY+MVKDLRT YEV +P +VL+GD+DGF+
Sbjct: 303 EERAEMDALKGDGGS--SWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFL 358
>gi|376253852|ref|YP_005142311.1| peptide chain release factor 2 [Corynebacterium diphtheriae PW8]
gi|372116936|gb|AEX69406.1| peptide chain release factor 2 [Corynebacterium diphtheriae PW8]
Length = 369
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 158/355 (44%), Positives = 227/355 (63%), Gaps = 9/355 (2%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
+S + ++ I+K + ++L R+ L + + P LWDDP A +++ E S+ K+
Sbjct: 6 QSAVTQLDSTLTTIEKVMNPEDLESRVRELEQQASDPTLWDDPDTAQKVTTELSSVQAKL 65
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
K++ Q + + M +LA EE + L L E L + + E+ +LSGE D
Sbjct: 66 KKLSTLRQRIDDLPVMYELADEEGEDALALAD-EELAELTADVEALEVKTMLSGEYDSRE 124
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
I +++GAGG ++ DWA M+++MY WA++ ++V + D E AGIK AT V GEY
Sbjct: 125 AVINIRSGAGGVDAADWAEMLMRMYIRWAEKNDHKVDIYDISYAEEAGIKSATFVVHGEY 184
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
+G E G HRLVRISPFD+ RR TSFA + V+P + + H+ I +S++R++ +RS
Sbjct: 185 MYGQLSVEQGAHRLVRISPFDNQGRRQTSFAEIEVLP-VVEQTDHIDIPDSEVRVDVYRS 243
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ--- 382
G GGQ NTTDSAVR+ HIPTGI TCQNE+SQ QNKASAM VLQ+++ LE RQ
Sbjct: 244 SGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKL--LERKRQEER 301
Query: 383 AQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
A+++A + + SWGNQ+R+YVLHPY+MVKDLRTNYEV+DP VL+GD+DG +
Sbjct: 302 AELDA--LGAGGNASWGNQMRSYVLHPYQMVKDLRTNYEVNDPQKVLDGDIDGLL 354
>gi|372489474|ref|YP_005029039.1| peptide chain release factor 2 [Dechlorosoma suillum PS]
gi|359356027|gb|AEV27198.1| peptide chain release factor 2 [Dechlorosoma suillum PS]
Length = 367
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 149/349 (42%), Positives = 224/349 (64%), Gaps = 14/349 (4%)
Query: 99 IKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEH 158
+++ L + VRL +S EL P++WDD A + RE +L G + ++ Q L +
Sbjct: 23 LRRYLDYDTKEVRLVEVSRELESPDVWDDAKRAQDLGREKKALEGVVVTLQEVAQGLADG 82
Query: 159 IDMIKLAREENDTEL------ELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQA 212
++ ++AREE D + + E++EA K E + + DP C++E+QA
Sbjct: 83 KELFEIAREEGDFDTVAAVAADNEAIEA------KVAALEFRRMFNNPQDPNPCFLEIQA 136
Query: 213 GAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKA 272
GAGGTE+ DWASM+L+MY + +R+G+ V +++E G++AGIK AT+++ G+YA+G +
Sbjct: 137 GAGGTEAQDWASMLLRMYLRYTERKGFDVQVLEESEGDVAGIKSATLRIAGDYAYGMLRT 196
Query: 273 EVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQH 332
E G+HRLVR SPFDS RRHTSF +V V P D S + IN +D+R + +R+ GAGGQH
Sbjct: 197 ETGIHRLVRKSPFDSNARRHTSFTSVFVYPEV-DDSIEIDINPADVRTDTYRASGAGGQH 255
Query: 333 ANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQS 392
N TDSAVR+ H+PTGI CQN+RSQH+N+ A +L++R+ + E+ +Q + +
Sbjct: 256 INKTDSAVRLTHVPTGIVVQCQNDRSQHRNRDEAWQMLRARLYEFELRKQQAEQQKLEDA 315
Query: 393 LTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
+DI WG+QIR+YVL R +KDLRTN+E + +VL+GDLD FI + L
Sbjct: 316 KSDIGWGHQIRSYVLDQSR-IKDLRTNFETGNTQAVLDGDLDDFIQASL 363
>gi|134095412|ref|YP_001100487.1| peptide chain release factor 2 [Herminiimonas arsenicoxydans]
gi|133739315|emb|CAL62364.1| Peptide chain release factor 2 (RF-2) [Herminiimonas
arsenicoxydans]
Length = 325
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 148/327 (45%), Positives = 219/327 (66%), Gaps = 10/327 (3%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTE----LE 174
+ P +WDDP A + +E SL + + + EL + D+ ++AREEND + +E
Sbjct: 1 MEDPKVWDDPKRAQDLGKEKKSLEAIVHTLIKVDAELKDAHDLFEMAREENDEDTIVAIE 60
Query: 175 LESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWA 234
++ E L T+ + E + SG +D +C+I++QAGAGGTE+ DWASM+L+ Y +
Sbjct: 61 ADTQELLKTV----EGMEFRRMFSGPMDANNCFIDIQAGAGGTEAQDWASMLLRQYLRYC 116
Query: 235 QRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTS 294
+R+G++V ++++ GE+AGIK AT+KV+GEYA+G + E GVHRLVR SPFDS RHTS
Sbjct: 117 ERKGFKVEILEQSDGEVAGIKTATLKVEGEYAYGLLRTETGVHRLVRKSPFDSANGRHTS 176
Query: 295 FAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQ 354
F+++ V P D S + IN +D+RI+ +R+ GAGGQH N TDSAVR+ H P+GI CQ
Sbjct: 177 FSSLFVYPEV-DDSIEIDINPADVRIDTYRASGAGGQHINKTDSAVRLTHGPSGIVVQCQ 235
Query: 355 NERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVK 414
N+RSQH+NKA A +L++++ +LE+ + + S TD+ WG+QIR+YVL R +K
Sbjct: 236 NDRSQHRNKAEAWDMLKAKLFELEMRNRMSEQQKLEDSKTDVGWGHQIRSYVLDQSR-IK 294
Query: 415 DLRTNYEVSDPDSVLEGDLDGFILSYL 441
DLRTN+E + +VL+GDLD FI + L
Sbjct: 295 DLRTNFETGNTKAVLDGDLDDFIAASL 321
>gi|402824827|ref|ZP_10874163.1| peptide chain release factor 2 [Sphingomonas sp. LH128]
gi|402261628|gb|EJU11655.1| peptide chain release factor 2 [Sphingomonas sp. LH128]
Length = 321
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 149/307 (48%), Positives = 205/307 (66%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
+E L G + V + E+ + ++ ++L E D E E L AL + ++ + ++ A
Sbjct: 2 KERRRLEGAIGAVNSISAEMADAVEFVELGEMEGDEETIAEGLSALAALAERADQDKVTA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+EV AGAGGTES DWA ++ +MY WA+R GY+V L+D GE AGIK
Sbjct: 62 LLSGEADGNDTYLEVHAGAGGTESQDWAEILQRMYTRWAERHGYKVELVDYHAGEAAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
T+ + GE A+GYAK E GVHRLVRISP+DS RRHTSF++V V P D + ++IN
Sbjct: 122 SCTLLIKGENAYGYAKTESGVHRLVRISPYDSAARRHTSFSSVWVYPVI-DDTFEIEINP 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SDL+I+ +R+ GAGGQH NTTDSAVRI H P+GI Q +RSQH+N+ AMG+L++R+
Sbjct: 181 SDLKIDTYRASGAGGQHVNTTDSAVRITHQPSGIIVASQIDRSQHKNREIAMGMLKARMF 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ R+ + + S +DI WG+QIR+YVL PY+ VKDLRT + PD VL+G LD
Sbjct: 241 EAEMRRREEAASAEHASKSDIGWGHQIRSYVLQPYQQVKDLRTGVVSTAPDDVLDGALDP 300
Query: 436 FILSYLS 442
F+ + LS
Sbjct: 301 FMAAALS 307
>gi|38233352|ref|NP_939119.1| peptide chain release factor 2 [Corynebacterium diphtheriae NCTC
13129]
gi|375292628|ref|YP_005127167.1| peptide chain release factor 2 [Corynebacterium diphtheriae INCA
402]
gi|376289900|ref|YP_005162147.1| peptide chain release factor 2 [Corynebacterium diphtheriae C7
(beta)]
gi|376292796|ref|YP_005164470.1| peptide chain release factor 2 [Corynebacterium diphtheriae HC02]
gi|76363349|sp|Q6NIM2.1|RF2_CORDI RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|38199612|emb|CAE49268.1| peptide chain release factor 2 [Corynebacterium diphtheriae]
gi|371582299|gb|AEX45965.1| peptide chain release factor 2 [Corynebacterium diphtheriae INCA
402]
gi|372103296|gb|AEX66893.1| peptide chain release factor 2 [Corynebacterium diphtheriae C7
(beta)]
gi|372110119|gb|AEX76179.1| peptide chain release factor 2 [Corynebacterium diphtheriae HC02]
Length = 369
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 158/355 (44%), Positives = 227/355 (63%), Gaps = 9/355 (2%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
+S + ++ I+K + ++L R+ L + + P LWDDP A +++ E S+ K+
Sbjct: 6 QSAVTQLDSTLTTIEKVMNPEDLESRVRELEQQASDPTLWDDPDTAQKVTTELSSVQAKL 65
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
K++ Q + + M +LA EE + L L E L + + E+ +LSGE D
Sbjct: 66 KKLSTLRQRIDDLPVMYELADEEGEDALALAD-EELAELTADVEALEVKTMLSGEYDSRE 124
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
I +++GAGG ++ DWA M+++MY WA++ ++V + D E AGIK AT V GEY
Sbjct: 125 AVINIRSGAGGVDAADWAEMLMRMYIRWAEKNDHKVDIYDISYAEEAGIKSATFVVHGEY 184
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
+G E G HRLVRISPFD+ RR TSFA + V+P + + H+ I +S++R++ +RS
Sbjct: 185 MYGQLSVEQGAHRLVRISPFDNQGRRQTSFAEIEVLPVV-EQTDHIDIPDSEVRVDVYRS 243
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ--- 382
G GGQ NTTDSAVR+ HIPTGI TCQNE+SQ QNKASAM VLQ+++ LE RQ
Sbjct: 244 SGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKL--LERKRQEER 301
Query: 383 AQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
A+++A + + SWGNQ+R+YVLHPY+MVKDLRTNYEV+DP VL+GD+DG +
Sbjct: 302 AELDA--LGAGGNASWGNQMRSYVLHPYQMVKDLRTNYEVNDPQKVLDGDIDGLL 354
>gi|289450201|ref|YP_003475113.1| peptide chain release factor 2 [Clostridiales genomosp. BVAB3 str.
UPII9-5]
gi|289184748|gb|ADC91173.1| peptide chain release factor 2 [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 369
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 148/334 (44%), Positives = 215/334 (64%), Gaps = 5/334 (1%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
R++ L A +P+ W+D A + + L K+ + ++E + +I L +EEND
Sbjct: 33 RISELEARTQEPDFWNDQTKAQEVQTKLAGLQRKVDTYRHLQKEFDDIDTLIDLGQEEND 92
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
+ E + + L LL GE D + + + AGAGGTE+ DW M+ +MY
Sbjct: 93 GAVVAEVQTQFNAFKELFNKLRLQTLLVGEYDRNNVILNIHAGAGGTEAQDWTEMLYRMY 152
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA+ Y++ ++D + G+ AG+K + ++ GE A+GY ++E+GVHRLVRISPFD+ R
Sbjct: 153 TRWAEDHDYQLKVLDILDGDEAGLKSVSFEIIGENAYGYMRSEMGVHRLVRISPFDASGR 212
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSFA+V V+P D+S + IN DLRI+R+RS GAGGQH N T+SA+RI HIPTG+
Sbjct: 213 RHTSFASVEVLPEL-DNSIQININPDDLRIDRYRSSGAGGQHVNKTESAIRITHIPTGVV 271
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNA--EHTQSLTDISWGNQIRTYVLH 408
+CQ ERSQ QN+ +AM +L+S++ +A+ AQM+ + + DI+WG+QIR+YV
Sbjct: 272 VSCQTERSQIQNRETAMNMLKSKL--FALAKAAQMDKVDDLKGNQMDIAWGSQIRSYVFC 329
Query: 409 PYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
PY MVKD RTNYEV+ D V++GDLDGFI +YLS
Sbjct: 330 PYTMVKDHRTNYEVTGVDKVMDGDLDGFINAYLS 363
>gi|376284273|ref|YP_005157483.1| peptide chain release factor 2 [Corynebacterium diphtheriae 31A]
gi|371577788|gb|AEX41456.1| peptide chain release factor 2 [Corynebacterium diphtheriae 31A]
Length = 369
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 158/355 (44%), Positives = 227/355 (63%), Gaps = 9/355 (2%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
+S + ++ I+K + ++L R+ L + + P LWDDP A +++ E S+ K+
Sbjct: 6 QSAVTQLDSTLTTIEKVMNPEDLESRVRELEQQASDPTLWDDPDTAQKVTTELSSVQAKL 65
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
K++ Q + + M +LA EE + L L E L + + E+ +LSGE D
Sbjct: 66 KKLSTLRQRIDDLPVMYELADEEGEDALALAD-EELAELTADVEALEVKTMLSGEYDSRE 124
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
I +++GAGG ++ DWA M+++MY WA++ ++V + D E AGIK AT V GEY
Sbjct: 125 AVINIRSGAGGVDAADWAEMLMRMYIRWAEKNDHKVDIYDISYAEEAGIKSATFVVHGEY 184
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
+G E G HRLVRISPFD+ RR TSFA + V+P + + H+ I +S++R++ +RS
Sbjct: 185 MYGQLSVEQGAHRLVRISPFDNQGRRQTSFAEIEVLP-VVEQTDHIDIPDSEVRVDVYRS 243
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ--- 382
G GGQ NTTDSAVR+ HIPTGI TCQNE+SQ QNKASAM VLQ+++ LE RQ
Sbjct: 244 SGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKL--LERKRQDER 301
Query: 383 AQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
A+++A + + SWGNQ+R+YVLHPY+MVKDLRTNYEV+DP VL+GD+DG +
Sbjct: 302 AELDA--LGAGGNASWGNQMRSYVLHPYQMVKDLRTNYEVNDPQKVLDGDIDGLL 354
>gi|395789856|ref|ZP_10469364.1| peptide chain release factor 2 [Bartonella taylorii 8TBB]
gi|395428078|gb|EJF94160.1| peptide chain release factor 2 [Bartonella taylorii 8TBB]
Length = 322
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 150/310 (48%), Positives = 214/310 (69%), Gaps = 1/310 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + +++F + L E I++I + EE+D E+ ++ ++ ++ + ++++D
Sbjct: 3 RERQHLDDSINGIRSFTKTLEECIELIAMGEEESDIEIITDAENSIRNLKSEIDKRQIDV 62
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE+DP Y+EV AGAGGTES DWASM+L+MY WA++ +V +++ GE AGIK
Sbjct: 63 LLSGEVDPNDTYLEVHAGAGGTESQDWASMLLRMYTRWAEQHKMKVEILEIHDGEEAGIK 122
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI V G A+G K E GVHRLVRISPFDS +RHTSFA++ V P D + V ++E
Sbjct: 123 SATILVKGHNAYGMLKTESGVHRLVRISPFDSNAKRHTSFASIWVYP-VIDDNIEVDVSE 181
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
+D+RI+ +R+ GAGGQH NTTDSAVRI HI TGI CQ ERSQH+N+A+A +L++R+
Sbjct: 182 ADVRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNRATAWSMLRARLY 241
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ ++ + S T+I WG+QIR+YVL PY++VKDLRT E +DP SVL G+LD
Sbjct: 242 EEELKKREEETNAVEASKTEIGWGHQIRSYVLQPYQLVKDLRTGVENTDPQSVLNGNLDA 301
Query: 436 FILSYLSASL 445
FI + L+ L
Sbjct: 302 FIEATLAQRL 311
>gi|376287261|ref|YP_005159827.1| peptide chain release factor 2 [Corynebacterium diphtheriae BH8]
gi|371584595|gb|AEX48260.1| peptide chain release factor 2 [Corynebacterium diphtheriae BH8]
Length = 369
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 158/355 (44%), Positives = 226/355 (63%), Gaps = 9/355 (2%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
+S + ++ I+K + + L R+ L + + P LWDDP A +++ E S+ K+
Sbjct: 6 QSAVTQLDSTLTTIEKVMNPEELESRVRELEQQASDPTLWDDPDTAQKVTTELSSVQAKL 65
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
K++ Q + + M +LA EE + L L E L + + E+ +LSGE D
Sbjct: 66 KKLSTLRQRIDDLPVMYELADEEGEDALALAD-EELAELTADIEALEVKTMLSGEYDSRE 124
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
I +++GAGG ++ DWA M+++MY WA++ ++V + D E AGIK AT V GEY
Sbjct: 125 AVINIRSGAGGVDAADWAEMLMRMYTRWAEKNDHKVDIYDISYAEEAGIKSATFVVHGEY 184
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
+G E G HRLVRISPFD+ RR TSFA + V+P + + H+ I +S++R++ +RS
Sbjct: 185 MYGQLSVEQGAHRLVRISPFDNQGRRQTSFAEIEVLP-VVEQTDHIDIPDSEVRVDVYRS 243
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ--- 382
G GGQ NTTDSAVR+ HIPTGI TCQNE+SQ QNKASAM VLQ+++ LE RQ
Sbjct: 244 SGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKL--LERKRQEER 301
Query: 383 AQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
A+++A + + SWGNQ+R+YVLHPY+MVKDLRTNYEV+DP VL+GD+DG +
Sbjct: 302 AELDA--LGAGGNASWGNQMRSYVLHPYQMVKDLRTNYEVNDPQKVLDGDIDGLL 354
>gi|423712669|ref|ZP_17686969.1| peptide chain release factor 2 [Bartonella washoensis Sb944nv]
gi|395411462|gb|EJF77984.1| peptide chain release factor 2 [Bartonella washoensis Sb944nv]
Length = 322
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 149/307 (48%), Positives = 214/307 (69%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + +K+F ++L E +++I + EE+D E+ +++ ++ ++ + ++++D
Sbjct: 3 RERQRLDDAIGGIKSFTKKLEECVELIAMGEEESDIEIVIDAENSIRDLKNEIDKRQIDV 62
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE DP Y+EV AGAGGTES DWASM+L+MY WA++ +V +++ GE AGIK
Sbjct: 63 LLSGEADPNDTYLEVHAGAGGTESQDWASMLLRMYIRWAEQHKMKVEVLETHDGEEAGIK 122
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI + G A+G K E GVHRLVRISPFDS +RHTSFA++ V P D + V ++E
Sbjct: 123 SATILIKGHNAYGLLKTESGVHRLVRISPFDSNAKRHTSFASIWVYP-VIDDNIEVDVSE 181
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD+RI+ +R+ GAGGQH NTTDSAVRI HI TGI CQ ERSQH+N+A+A +L++R+
Sbjct: 182 SDVRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQKERSQHKNRATAWSMLRARLY 241
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ ++ + S T+I WG+QIR+YVL PY++VKDLRT E +DP SVL G+LD
Sbjct: 242 EEELKKKEEETNAVESSKTEIGWGHQIRSYVLQPYQLVKDLRTGVENTDPQSVLNGNLDA 301
Query: 436 FILSYLS 442
FI + L+
Sbjct: 302 FIEAALA 308
>gi|379714854|ref|YP_005303191.1| peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis 316]
gi|377653560|gb|AFB71909.1| Peptide chain release factor 2 (RF-2) [Corynebacterium
pseudotuberculosis 316]
Length = 366
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 160/347 (46%), Positives = 227/347 (65%), Gaps = 12/347 (3%)
Query: 95 SIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQE 154
++ I+K + + L R+ L + + P LWD+P HA +++ E S+ ++K++ + Q
Sbjct: 15 TLTTIEKVMDPEELASRVRELEQQASDPTLWDNPDHAQKVTTELSSVQAQLKKLTSLRQR 74
Query: 155 LLEHIDMIKLAREEND-TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAG 213
+ + M +LA EE D TEL E L L + + + E+ +LSGE D I +++G
Sbjct: 75 IDDMPVMYELAEEEGDGTELADEELAELTS---EIESLEVKTMLSGEYDAREAVINIRSG 131
Query: 214 AGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAE 273
AGG ++ DWA M+++MY WA++ +V + D E AGIK AT V GEY +G E
Sbjct: 132 AGGVDAADWAEMLMRMYVRWAEKNDRKVDIYDISYAEEAGIKSATFVVHGEYMYGQLSVE 191
Query: 274 VGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHA 333
G HRLVRISPFD+ RR TSFA + V+P + + H+ I +S++R++ +RS GGQ
Sbjct: 192 QGAHRLVRISPFDNQGRRQTSFAEIEVLP-VVEQTDHIDIPDSEVRMDVYRSSRPGGQSV 250
Query: 334 NTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ---AQMNAEHT 390
NTTDSAVR+ HIPTGI TCQNE+SQ QNKASAM VLQ+++ LE RQ A+++A
Sbjct: 251 NTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKL--LEKKRQEERAELDA--L 306
Query: 391 QSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
+ + SWGNQ+R+YVLHPY+MVKDLRTNYEV+DP VL+GDLDGF+
Sbjct: 307 GAGGNASWGNQMRSYVLHPYQMVKDLRTNYEVNDPQKVLDGDLDGFL 353
>gi|373107682|ref|ZP_09521975.1| peptide chain release factor 2 [Stomatobaculum longum]
gi|371650640|gb|EHO16093.1| peptide chain release factor 2 [Stomatobaculum longum]
Length = 379
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 149/349 (42%), Positives = 218/349 (62%), Gaps = 1/349 (0%)
Query: 94 QSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQ 153
+ +Q ++ L +N R+ L + +PN W++P + +I RE+ SL ++
Sbjct: 16 KPLQEVEGSLDLENKEKRIAELDRMMEEPNFWENPEQSTKIVRENKSLKDTVERFHKLSS 75
Query: 154 ELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAG 213
+ DMI+L EE D EL E E L + + + LL+GE D + + + AG
Sbjct: 76 AYRDIADMIELGNEEGDEELIPEIREMLDGFIHDLEALKAETLLTGEYDANNAILRLNAG 135
Query: 214 AGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAE 273
AGGTES DW SM+ +MY WA+ GY + ++D + G++AGIK TI+++GE A+G ++E
Sbjct: 136 AGGTESSDWCSMLYRMYTRWAESHGYSIEVLDYLDGDVAGIKSVTIQINGENAYGRLRSE 195
Query: 274 VGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHA 333
GVHRLVRISPF++ +R TSF + ++P + HV IN D+R++ +RS GAGGQH
Sbjct: 196 HGVHRLVRISPFNAAGKRQTSFVSCDIMPELSN-EIHVDINPDDIRVDTYRSSGAGGQHI 254
Query: 334 NTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSL 393
N T SA+RI H+PTGI TCQNERSQ QNK AM +L++++ LE +QA+ E +
Sbjct: 255 NKTSSAIRITHLPTGIVVTCQNERSQFQNKDKAMQMLEAKLYMLEQQQQAEKADEIRGVV 314
Query: 394 TDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
D WG+QIR+YVL PY MVKD RT + + D+VL+GDLD F+ +YL+
Sbjct: 315 KDNGWGSQIRSYVLQPYTMVKDHRTGFSTGNVDAVLDGDLDDFMTAYLT 363
>gi|149196339|ref|ZP_01873394.1| peptide chain release factor RF-2 [Lentisphaera araneosa HTCC2155]
gi|149140600|gb|EDM28998.1| peptide chain release factor RF-2 [Lentisphaera araneosa HTCC2155]
Length = 332
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 153/333 (45%), Positives = 222/333 (66%), Gaps = 5/333 (1%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEN-DTELELES 177
+ + WDD A +L + K E + + I + +L EE +EL ++
Sbjct: 1 MGSSSFWDDSNAAKSTVDRVSALKSVVVPYKELEARVEDFITLSELIEEEGASSELMDDA 60
Query: 178 LEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRR 237
E + + + EL + LSG+ D SC++ + AGAGGTES DWA M+L+MY+ WA+ +
Sbjct: 61 GEESPELEKALDDLELLSFLSGKYDSGSCFLSINAGAGGTESCDWADMLLRMYRRWAESK 120
Query: 238 GYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAA 297
G++VT + + GE AGIK T+ ++G AFGY KAE GVHRLVR+SPFDS KRRHTSF +
Sbjct: 121 GFKVTFVSILEGEEAGIKNCTMFIEGPMAFGYLKAERGVHRLVRVSPFDSNKRRHTSFTS 180
Query: 298 VAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNER 357
+ V+P+ GD + V I+ DLR++ FR+ GAGGQH NTTDSA+R+ H+PTGI +CQ ER
Sbjct: 181 IDVVPDIGDEA-EVDIDAKDLRVDTFRASGAGGQHVNTTDSAIRLTHLPTGIVVSCQMER 239
Query: 358 SQHQNKASAMGVLQSRVNQLEIA-RQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDL 416
SQH+N+A+AM +L +++ +L+ A R+A+++A + DI WG+QIR+YVL R VKD
Sbjct: 240 SQHKNRATAMKMLGAKLEELKQAEREAELDANAGEK-NDIGWGSQIRSYVLDDRR-VKDH 297
Query: 417 RTNYEVSDPDSVLEGDLDGFILSYLSASLDKDE 449
RTN+ S+ D VL+GD+D FI S+L + L+K+E
Sbjct: 298 RTNHSTSNTDKVLDGDIDPFIQSFLRSGLNKEE 330
>gi|300114892|ref|YP_003761467.1| peptide chain release factor 2 [Nitrosococcus watsonii C-113]
gi|299540829|gb|ADJ29146.1| peptide chain release factor 2 [Nitrosococcus watsonii C-113]
Length = 331
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 149/329 (45%), Positives = 218/329 (66%), Gaps = 4/329 (1%)
Query: 118 ELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELES 177
EL P++WD+P A ++ +E L + + +E+++ ++ +LA EE+D E
Sbjct: 6 ELAVPSVWDEPERAQQLGQERAQLQSVVSPLAELGEEIMQAKELFELAVEEDDEGTAQEM 65
Query: 178 LEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRR 237
+ L + ++ + E + +GE+DP + Y+++QAG+GGTE+ DWASM+L+MY W ++
Sbjct: 66 IAELDAVEQRLAKLEFQRMFAGEMDPNNAYLDIQAGSGGTEAQDWASMLLRMYLRWGEKH 125
Query: 238 GYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAA 297
++ L + GE+AGIK ATI +GEYAFG+ + E GVHRLVR SPFDSG RRHTSFA+
Sbjct: 126 DFKTGLTEVSEGEVAGIKSATIHFEGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFAS 185
Query: 298 VAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNER 357
V V P D ++IN +DLRI+ +R+ GAGGQH N TDSAVRI H+ + + CQ+ER
Sbjct: 186 VFVYPEV-DERIDIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHLSSNLVVQCQSER 244
Query: 358 SQHQNKASAMGVLQSRVNQLEI-ARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDL 416
SQHQNKA AM L++++ +LE+ +RQA+ A ++ DI WG+QIR YVL R +KDL
Sbjct: 245 SQHQNKAHAMAQLRAKLYELEMRSRQAEKQAAE-EAKADIGWGSQIRNYVLDQSR-IKDL 302
Query: 417 RTNYEVSDPDSVLEGDLDGFILSYLSASL 445
RT E+ + VL+GDLD FI + L + L
Sbjct: 303 RTGVEIGNTQGVLDGDLDPFIEASLKSGL 331
>gi|345430053|ref|YP_004823173.1| peptide chain release factor RF-2 [Haemophilus parainfluenzae T3T1]
gi|301156116|emb|CBW15587.1| peptide chain release factor RF-2 [Haemophilus parainfluenzae T3T1]
Length = 347
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 151/335 (45%), Positives = 220/335 (65%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++AEL +P++W++P A + +E SL + +K EQ L + +++LA E D
Sbjct: 15 RLEEVNAELEQPDVWNEPEKAQALGKERVSLEQVVDTIKNLEQGLEDVEGLLELAVEAED 74
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
E E++ L + ++ + E + SGE D C CY+++QAG+GGTE+ DW M+L+MY
Sbjct: 75 EETFNEAVAELDELEQQLAKLEFRRMFSGEHDACDCYVDLQAGSGGTEAQDWTEMLLRMY 134
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA+ +G++ LM+ G++AG+K ATI+V GEYAFG+ + E G+HRLVR SPFDS R
Sbjct: 135 LRWAESKGFKTELMEVSDGDVAGLKSATIRVSGEYAFGWLRTETGIHRLVRKSPFDSNNR 194
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSFAA V P ++IN +DLRI+ +R+ GAGGQH N T+SAVRI H+P+GI
Sbjct: 195 RHTSFAAAFVYPEID-DDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHMPSGIV 253
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+NK AM L++++ +LE+ ++ + +DI WG+QIR+YVL
Sbjct: 254 VQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDIGWGSQIRSYVLDDA 313
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E + +VL+GDLD FI + L A L
Sbjct: 314 R-IKDLRTGVENRNTQAVLDGDLDRFIEASLKAGL 347
>gi|308187994|ref|YP_003932125.1| peptide chain release factor 2 (RF-2) [Pantoea vagans C9-1]
gi|308058504|gb|ADO10676.1| Peptide chain release factor 2 (RF-2) [Pantoea vagans C9-1]
Length = 351
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 151/335 (45%), Positives = 220/335 (65%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++AEL +P++W++P A + +E SL ++ ++ Q L + +++LA E D
Sbjct: 19 RLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVQTLEQMSQGLEDVQGLLELAVEAED 78
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
E E++ L + K E E + SGE D CYI++QAG+GGTE+ DWASM+++MY
Sbjct: 79 EETFNEAVAELDVLEGKLGELEFRRMFSGEYDSADCYIDLQAGSGGTEAQDWASMLMRMY 138
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA+ +G++ +++E GE+AGIK TI+V G+YAFG+ + E GVHRLVR SPFDSG R
Sbjct: 139 LRWAEAKGFKTEIIEESEGEVAGIKSVTIRVSGDYAFGWLRTETGVHRLVRKSPFDSGGR 198
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSF++ + P D + IN +DLRI+ +R+ GAGGQH N T+SAVRI HIPTG
Sbjct: 199 RHTSFSSAFIYPEV-DDDIDIDINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTGTV 257
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+NK AM +++++ +LE+ ++ + +DI WG+QIR+YVL
Sbjct: 258 TQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQALEDNKSDIGWGSQIRSYVLDDA 317
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E + +VL+GDLD FI + L A L
Sbjct: 318 R-IKDLRTGVETRNTQAVLDGDLDRFIEASLKAGL 351
>gi|162447197|ref|YP_001620329.1| peptide chain release factor RF-2 [Acholeplasma laidlawii PG-8A]
gi|189039998|sp|A9NF23.1|RF2_ACHLI RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|161985304|gb|ABX80953.1| peptide chain release factor RF-2 [Acholeplasma laidlawii PG-8A]
Length = 365
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 153/353 (43%), Positives = 234/353 (66%), Gaps = 13/353 (3%)
Query: 96 IQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQEL 155
I+ ++ L +N RL + + PN W+D A +IS+E L K + + + + +
Sbjct: 17 IKDLENALDLDAINNRLKEIEPIMANPNFWNDSNQAKKISQELNQLTEKKQTITSIQNQY 76
Query: 156 LEHIDMIKLAREENDT----ELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
+ + ++ A+E ++ E E++SL+ +K E E++ LL+GE D + +E+
Sbjct: 77 EDALMWLEEAKEGTESWDILEAEIDSLQ------KKISEFEIEVLLNGEYDHNNAILELH 130
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
GAGGTESMDW ++++MY+ +A +GY+V +++ + GE AG+K T+++ G YA+G K
Sbjct: 131 PGAGGTESMDWCGILMRMYERFAGYKGYKVEILNYLAGEEAGVKSVTLRISGPYAYGNLK 190
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
+E GVHRLVRISPFDS KRRHTSF + V P D ++ V++ + D+R++ F+S GAGGQ
Sbjct: 191 SERGVHRLVRISPFDSNKRRHTSFVSCDVAPEI-DETSEVELKDDDIRMDTFQSSGAGGQ 249
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI-ARQAQMNAEHT 390
NTT SAVR+ HIPTGI QNERSQ +NK +AM +L+S++ Q E+ +QA++NA
Sbjct: 250 SVNTTYSAVRLTHIPTGIVVNIQNERSQIKNKEAAMQILKSKLIQKELEEKQAKLNALKG 309
Query: 391 QSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSA 443
+ +DI WG+QIR+YV PY+MVKD RTNYEV + SV++GD+DGFI +YL +
Sbjct: 310 EK-SDIGWGSQIRSYVFQPYQMVKDHRTNYEVGNIQSVMDGDIDGFINAYLKS 361
>gi|114326944|ref|YP_744101.1| peptide chain release factor 2 [Granulibacter bethesdensis CGDNIH1]
gi|114315118|gb|ABI61178.1| bacterial peptide chain release factor 2 (RF-2) [Granulibacter
bethesdensis CGDNIH1]
Length = 323
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 140/302 (46%), Positives = 211/302 (69%), Gaps = 1/302 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L +++ V E E+ + ++ ++A + D + ++ L T+ ++K E+++
Sbjct: 3 RERTRLASQVEGVLRMESEVSDATELAEMAEADGDEAMATDARRMLETIAAEAKRLEIES 62
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+E+ +GAGGTE+ DWA M+L+MY WA+ GY+VTL+++ GE AGIK
Sbjct: 63 LLSGEADGNDAYLEINSGAGGTEAQDWAEMLLRMYTRWAEAHGYKVTLIEQSDGEQAGIK 122
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
AT++V G A+G+ K E GVHRLVRISPFDS RR TSFA++ V P D + ++INE
Sbjct: 123 SATLQVAGPSAYGWLKTEAGVHRLVRISPFDSAARRQTSFASIWVYPVV-DDNIEIEINE 181
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
+DL+++ FR+ GAGGQH N T+SA+RI H+P+GI CQ +RSQH+N+A+AM +L++R+
Sbjct: 182 ADLKVDTFRASGAGGQHVNKTESAIRITHVPSGIIVACQTDRSQHRNRATAMNMLKARLY 241
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ ++ E + ++I WG+QIR+YVL PY++VKDLRTN E +P +VL+GDLD
Sbjct: 242 EAELQKREAAAQEQENAKSEIGWGHQIRSYVLAPYQLVKDLRTNVEKGNPGAVLDGDLDE 301
Query: 436 FI 437
F+
Sbjct: 302 FM 303
>gi|13959455|sp|P57511.1|RF2_BUCAI RecName: Full=Peptide chain release factor 2; Short=RF-2
Length = 365
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 142/347 (40%), Positives = 226/347 (65%), Gaps = 2/347 (0%)
Query: 91 AIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKA 150
++ + +Q +K+ L + R+ + EL+ P W + + ++++E L ++ +
Sbjct: 13 SLNRRVQDLKRYLDYNKKKSRVLEIDLELSSPKTWTEQISIKKLNKEKYLLNSIIQNINE 72
Query: 151 FEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEV 210
E+ + E + ++LA E D + ESL + + ++ K+ E + S + D CYI++
Sbjct: 73 IEENIKEVVIFLELAIETQDNLVFKESLLEIQKIEQEIKKLEFYRMFSKKNDHYDCYIDI 132
Query: 211 QAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYA 270
Q+G+GGT++ DW+ M+L+MY WA ++G+ ++DE GEI GIK +TIKV GEYAFG+
Sbjct: 133 QSGSGGTDAQDWSKMLLRMYLRWADKKGFHTEIIDESIGEIVGIKSSTIKVSGEYAFGWF 192
Query: 271 KAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGG 330
+ E G+HRL+R SPFDSGKRRHTSF+++ + P+ + + IN SDLRI+ +R+ GAGG
Sbjct: 193 RTETGIHRLIRKSPFDSGKRRHTSFSSIFIYPDINE-KIDININYSDLRIDVYRASGAGG 251
Query: 331 QHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHT 390
QH N T+SAVRI H+PT I CQN RSQH+NK AM +QS++ ++++ ++ + +
Sbjct: 252 QHVNRTESAVRITHLPTNIVTQCQNNRSQHKNKEQAMKQMQSKLYEIQMRKKQEEKQKIE 311
Query: 391 QSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
Q+ +DI+WGNQIR+Y+L + +KDLRT E + SVL+GDLD FI
Sbjct: 312 QNKSDITWGNQIRSYILDNSK-IKDLRTGVEKNHVQSVLDGDLDDFI 357
>gi|255348832|ref|ZP_05380839.1| peptide chain release factor 2 [Chlamydia trachomatis 70]
gi|255503372|ref|ZP_05381762.1| peptide chain release factor 2 [Chlamydia trachomatis 70s]
gi|255507050|ref|ZP_05382689.1| peptide chain release factor 2 [Chlamydia trachomatis D(s)2923]
gi|385241837|ref|YP_005809677.1| peptide chain release factor 2 [Chlamydia trachomatis E/11023]
gi|385245444|ref|YP_005814267.1| peptide chain release factor 2 [Chlamydia trachomatis E/150]
gi|296435060|gb|ADH17238.1| peptide chain release factor 2 [Chlamydia trachomatis E/150]
gi|296438780|gb|ADH20933.1| peptide chain release factor 2 [Chlamydia trachomatis E/11023]
Length = 334
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 151/323 (46%), Positives = 205/323 (63%), Gaps = 10/323 (3%)
Query: 124 LWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREE----NDTELELESLE 179
WDD AG+IS L ++ E EL + I+ E+ D E++ E +
Sbjct: 10 FWDDVARAGKISERIARLKQQLSEF----NELKNKVSTIQFFLEDEESSKDLEMQKELEK 65
Query: 180 ALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGY 239
+ +K E E LLSGELD SC++ + AGAGGTES DW M+L+MY WA +
Sbjct: 66 EFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMLLRMYMRWASSHSW 125
Query: 240 RVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVA 299
R+ ++D + GE+AGIK T+K+ GEYA+GYAKAE GVHRLVRISPFDS +RHTSF +V
Sbjct: 126 RIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHTSFVSVE 185
Query: 300 VIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQ 359
V P D V+I D+RI+ +RS GAGGQH N TDSAVRI H PTGI +CQNERSQ
Sbjct: 186 VFPEI-DDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSCQNERSQ 244
Query: 360 HQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTN 419
QN+ + M +L++R+ Q + + + ++ +ISWG+QIR YV PY +VKD+RT
Sbjct: 245 IQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGSQIRNYVFQPYTLVKDVRTG 304
Query: 420 YEVSDPDSVLEGD-LDGFILSYL 441
YEV + ++++G+ LD FI +YL
Sbjct: 305 YEVGNIQAMMDGELLDAFIKAYL 327
>gi|47558936|gb|AAT35568.1| protein release factor 2 [Chlamydia trachomatis]
Length = 368
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 156/335 (46%), Positives = 209/335 (62%), Gaps = 10/335 (2%)
Query: 112 LNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREE--- 168
L L + + WDD AG+IS L ++ E EL + I+ E+
Sbjct: 32 LKELEQQAVQDGFWDDVARAGKISERIARLKQQLSEF----NELKNKVSTIQFFLEDEES 87
Query: 169 -NDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVL 227
D E++ E + + RK E E LLSGELD SC++ + AGAGGTES DW MVL
Sbjct: 88 SKDLEMQKELEKEFVFCERKITEWETLRLLSGELDRSSCFLSINAGAGGTESCDWVEMVL 147
Query: 228 QMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDS 287
+MY WA +RV ++D + GE+AGIK T+K+ GEYA+GYAKAE GVHRLVRISPFDS
Sbjct: 148 RMYMRWASSHSWRVEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDS 207
Query: 288 GKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPT 347
+RHTSFA+V V P D V+I D+RI+ +RS GAGGQH N TDSAVRI H PT
Sbjct: 208 NAKRHTSFASVEVFPEI-DDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPT 266
Query: 348 GITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVL 407
GI + QNERSQ QN+ + M +L++R+ Q + + + ++ +ISWG+QIR YV
Sbjct: 267 GIVVSRQNERSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGSQIRNYVF 326
Query: 408 HPYRMVKDLRTNYEVSDPDSVLEGD-LDGFILSYL 441
PY +VKD+RT YEV + ++++G+ LD FI +YL
Sbjct: 327 QPYTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYL 361
>gi|320161067|ref|YP_004174291.1| peptide chain release factor 2 [Anaerolinea thermophila UNI-1]
gi|319994920|dbj|BAJ63691.1| peptide chain release factor 2 [Anaerolinea thermophila UNI-1]
Length = 351
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 157/344 (45%), Positives = 213/344 (61%), Gaps = 14/344 (4%)
Query: 112 LNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEN-- 169
L L E P +WDDP A R+ + L +E++ + Q L D ++LA E+
Sbjct: 16 LEQLQKEAENPGIWDDPTSAQRLMKRIADLR---EEIEGWNQFLKRCQDGLELAESEDES 72
Query: 170 ---DTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMV 226
D E E+ +LE L +++EL LLSG D + + + AGAGGT+S DWASM+
Sbjct: 73 LREDLEKEISALEKEL------QQRELTTLLSGPYDHENALLTINAGAGGTDSQDWASML 126
Query: 227 LQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFD 286
++MY W +RRG+ ++D GE AGIK TI V G YA+GY + E GVHRLVR+SPFD
Sbjct: 127 MRMYLRWCERRGFDSEILDFSEGEEAGIKSVTIAVTGPYAYGYLRGEKGVHRLVRLSPFD 186
Query: 287 SGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIP 346
+ RRHTSFA V V+P + +QIN DLRI+ +RS AGGQ+ +AVRI HIP
Sbjct: 187 AAHRRHTSFAQVEVLPEISNGDNEIQINPDDLRIDIYRSSSAGGQNVQKNATAVRITHIP 246
Query: 347 TGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYV 406
TGI +CQNERSQ QN+ +AM VL++R+ +L+ Q + AE WG+QIR+YV
Sbjct: 247 TGIVVSCQNERSQMQNRENAMRVLRARLAELKRQEQERQLAELRGEYIKAEWGSQIRSYV 306
Query: 407 LHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKDEG 450
LHPY++VKD RT YE + +VL+G+LDGFI +YL + K G
Sbjct: 307 LHPYQLVKDHRTEYETGNTQAVLDGELDGFIEAYLRSQKTKSGG 350
>gi|403382580|ref|ZP_10924637.1| protein PrfB [Paenibacillus sp. JC66]
Length = 334
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 151/334 (45%), Positives = 210/334 (62%), Gaps = 1/334 (0%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
++ P+ WDD A ++ E ++ + E + QE + M+ LA EE D LE E
Sbjct: 1 MSAPDFWDDNDRAQKMIAELNAVKDVVAEFASLNQEYEDLEVMLMLAEEEGDESLESELQ 60
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
E + + K K EL LLS D + +E+ GAGGTES DWA M+L+MY+ WA++R
Sbjct: 61 EGVAKLTEKLKSYELQLLLSEPYDRMNAILELHPGAGGTESQDWAEMLLRMYRRWAEKRD 120
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
Y+V ++D +PG+ AG+K T+ + G A+GY KAE GVHRLVRISPFDS RRHTSF +
Sbjct: 121 YKVEVLDYLPGDEAGVKSVTLLIKGFNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
V+P D ++I DL+I+ +R+ GAGGQH NTTDSAVRI HIPT + TCQ ERS
Sbjct: 181 DVVPEI-DDDVDIEIRTEDLKIDTYRASGAGGQHINTTDSAVRITHIPTNVVVTCQTERS 239
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
Q +N+ AM +L+S++ + ++ Q Q AE +I WG+QIR+YV HPY MVKD RT
Sbjct: 240 QIKNRERAMKILRSKLYERKLEEQRQELAEIRGEQREIGWGSQIRSYVFHPYSMVKDHRT 299
Query: 419 NYEVSDPDSVLEGDLDGFILSYLSASLDKDEGGQ 452
E + SV++G+LD I +YL + +D G +
Sbjct: 300 QAETGNVGSVMDGELDFLIDAYLRSQMDTKPGAK 333
>gi|256828464|ref|YP_003157192.1| peptide chain release factor 2 [Desulfomicrobium baculatum DSM
4028]
gi|256577640|gb|ACU88776.1| bacterial peptide chain release factor 2 (bRF- 2) [Desulfomicrobium
baculatum DSM 4028]
Length = 369
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 155/357 (43%), Positives = 227/357 (63%), Gaps = 3/357 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
K+ AA + + +RL + RLN + +++ P WD P + +E L ++
Sbjct: 8 KAQAAQLDERFTDFWRRLDLRRNKERLNEIEKQISSPGAWDKPELLTPVLQEKTQLESRV 67
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLE-ALLTMRRKSKEKELDALLSGELDPC 204
E +A Q ++ +++A E E+ L++LE AL M K + ++ LLS D
Sbjct: 68 DEWEALLQARDNALEWVEMASTEQTQEM-LQALEEALEEMSAKLEAAQMRTLLSDPEDVS 126
Query: 205 SCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGE 264
+E+ GAGGTES DWA M+L+MY+ +A+R G++V L+D +PG+ AGIK T+ + G
Sbjct: 127 EAILEIHPGAGGTESQDWAEMLLRMYRRFAERVGFKVELLDLLPGDEAGIKSVTLHIHGP 186
Query: 265 YAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFR 324
YA+G K E G HRL+RISPFDS RRHTSFA+V V P++G ++I + D+R++ FR
Sbjct: 187 YAYGQLKGEKGTHRLIRISPFDSSGRRHTSFASVDVYPDAG-QDIEIEIRDEDVRVDIFR 245
Query: 325 SGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQ 384
S G GGQ NTTDSAVR+ HIPTG+ A CQNE+SQH+NK +AM VL++R+ +LE+ + A
Sbjct: 246 SSGPGGQSVNTTDSAVRVTHIPTGLVAQCQNEKSQHKNKEAAMKVLKARLYELELQKIAS 305
Query: 385 MNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
+ I++G+QIRTY L PYR+VKD RT + S+ DSVL+G++D FI +YL
Sbjct: 306 ERQAEYVAKGAIAFGSQIRTYTLQPYRLVKDHRTGTDTSNVDSVLDGNIDAFIHNYL 362
>gi|157964348|ref|YP_001499172.1| peptide chain release factor 2 [Rickettsia massiliae MTU5]
gi|157844124|gb|ABV84625.1| Peptide chain release factor RF-2 [Rickettsia massiliae MTU5]
Length = 337
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 153/342 (44%), Positives = 227/342 (66%), Gaps = 5/342 (1%)
Query: 112 LNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDT 171
+N L P+LW+D +A ++ RE +L K+ + L + +++ ++A END
Sbjct: 1 MNTLEELTANPSLWNDQANAQKLLREKSNLEEKLNAFNKLKSNLKDALELEEMAEAENDL 60
Query: 172 ELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYK 231
E + + L + + + E + L SGE D +C++E+ AGAGGTES DWAS++++MY
Sbjct: 61 ETLSQIEQDLKNLSIIAAKFETECLFSGEADGNNCFLEINAGAGGTESHDWASIMMRMYL 120
Query: 232 SWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRR 291
+A+R G++ +++ + GE AGIK TI++ G+ A+G+ K E GVHRLVRISPF++ +R
Sbjct: 121 RFAERLGFKTEIINMINGEEAGIKSCTIRIIGKRAYGWFKTEAGVHRLVRISPFNAAGKR 180
Query: 292 HTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITA 351
TSFA+ V P D + + I + DLRI+ FR+ GAGGQH NTTDSAVRI HIPTG
Sbjct: 181 MTSFASSWVYPEI-DDNIAITIEDKDLRIDTFRASGAGGQHVNTTDSAVRITHIPTGTVT 239
Query: 352 TCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYR 411
CQ++RSQH+NKA AM +LQ+++ +LE+ ++ E + TD SWG+QIR+YVL PY+
Sbjct: 240 QCQSDRSQHKNKAQAMKMLQAKLYELEMQKRTDSVNEQNAAKTDNSWGHQIRSYVLQPYQ 299
Query: 412 MVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKDEGGQQ 453
MVKDLRT+YE SD VL+GDL+ F+ SA+L + GG++
Sbjct: 300 MVKDLRTDYETSDTKGVLDGDLEEFV----SANLAMNAGGKK 337
>gi|163759373|ref|ZP_02166459.1| peptide chain release factor 2 [Hoeflea phototrophica DFL-43]
gi|162283777|gb|EDQ34062.1| peptide chain release factor 2 [Hoeflea phototrophica DFL-43]
Length = 321
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 147/307 (47%), Positives = 211/307 (68%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + +K E +L +++++I++ EE D+++ E+ AL +R ++++++
Sbjct: 2 RERQQLEDSINGLKRTEAQLSDNLELIEMGEEEGDSDIVREAEAALKELRADVTKQQIES 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+EV +GAGGTES DWA+M+L+MY WA+R G +V L++ GE AGIK
Sbjct: 62 LLSGEADANDTYLEVHSGAGGTESQDWANMLLRMYTRWAERSGMKVELLEIHDGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
AT+ + G A+G+ K E GVHRLVRISP+DS RRHTSF+++ P D S V INE
Sbjct: 122 SATLLIKGHNAYGWLKTESGVHRLVRISPYDSQARRHTSFSSIWTYPVI-DDSIDVDINE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
S+ RI+ +R+ GAGGQH NTTDSAVRI HIPTGI CQ ERSQH+N+A A +L++R+
Sbjct: 181 SECRIDTYRASGAGGQHVNTTDSAVRITHIPTGIVVQCQQERSQHKNRAKAWDMLRARIY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ ++ + + S T+I WG+QIR+YVL PY++VKDLRT E + P VL+G LD
Sbjct: 241 EAELKKREEAANDEAASKTEIGWGHQIRSYVLQPYQLVKDLRTGTESTSPQDVLDGKLDP 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMEAALA 307
>gi|1172913|sp|P43918.1|RF2_HAEIN RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|309751145|gb|ADO81129.1| Peptide chain release factor 2 (RF-2) [Haemophilus influenzae
R2866]
Length = 365
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 153/360 (42%), Positives = 229/360 (63%), Gaps = 2/360 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
K+ ++ V++ L + RL ++ EL +P++W+DP A + +E SL +
Sbjct: 8 KNKIIDLSDRTSVLRGYLDFDAKVERLEEVNGELEQPDVWNDPDKAQALGKERVSLEQVV 67
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
+K EQ L + +++LA E D + E++ L + ++ ++ E + SGE D C
Sbjct: 68 NTIKNLEQGLEDVDGLLELAIEAEDEDTFNEAVAELDELEQQLEKLEFRRMFSGEHDACD 127
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
CY+++QAG+GGTE+ DW M+L+MY WA+ +G++ LM+ G++AG+K ATIKV GEY
Sbjct: 128 CYVDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELMEVSDGDVAGLKSATIKVSGEY 187
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
AFG+ + E G+HRLVR SPFDS RRHTSF+A V P ++IN +DLRI+ +R+
Sbjct: 188 AFGWLRTETGIHRLVRKSPFDSNNRRHTSFSAAFVYPEID-DDIDIEINPADLRIDVYRA 246
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQM 385
GAGGQH N T+SAVRI H+P+GI CQN+RSQH+NK AM L++++ +LE+ ++
Sbjct: 247 SGAGGQHVNKTESAVRITHMPSGIVVQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNAD 306
Query: 386 NAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ +DI WG+QIR+YVL R +KDLRT E + +VL+GDLD FI + L A L
Sbjct: 307 KQAMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDRFIEASLKAGL 365
>gi|292487146|ref|YP_003530016.1| peptide chain release factor 1 [Erwinia amylovora CFBP1430]
gi|428784074|ref|ZP_19001567.1| Peptide chain release factor 1 (RF-1) [Erwinia amylovora ACW56400]
gi|291552563|emb|CBA19608.1| Peptide chain release factor 1 (RF-1) [Erwinia amylovora CFBP1430]
gi|312171251|emb|CBX79510.1| Peptide chain release factor 1 (RF-1) [Erwinia amylovora ATCC
BAA-2158]
gi|426277789|gb|EKV55514.1| Peptide chain release factor 1 (RF-1) [Erwinia amylovora ACW56400]
Length = 332
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 146/331 (44%), Positives = 220/331 (66%), Gaps = 2/331 (0%)
Query: 115 LSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELE 174
++AEL +P++W++P A + +E +L ++ + Q L + +++LA E D +
Sbjct: 4 VNAELEQPDVWNEPDRAQALGKERSALEAVVETLDQMTQGLEDVSGLLELAVEAEDEDTF 63
Query: 175 LESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWA 234
E++ L + +K E E + SGE D CY+++QAG+GGTE+ DWASM+L+MY WA
Sbjct: 64 NEAVAELDGLDKKLGELEFRRMFSGEYDSADCYMDIQAGSGGTEAQDWASMLLRMYLRWA 123
Query: 235 QRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTS 294
+ +G++ +++E GE+AG K ATIK+ G+YAFG+ + E GVHRLVR SPFDSG RRHTS
Sbjct: 124 EAKGFKTEIIEESDGEVAGTKSATIKIIGDYAFGWLRTETGVHRLVRKSPFDSGGRRHTS 183
Query: 295 FAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQ 354
F++V + P D + ++IN +DLRI+ +R+ GAGGQH N T+SAVRI H+PT I CQ
Sbjct: 184 FSSVFIYPEV-DDNIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHLPTNIVVQCQ 242
Query: 355 NERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVK 414
N+RSQH+NK A L++++ + E+ ++ + +DI WG+QIR+YVL R +K
Sbjct: 243 NDRSQHKNKDQAFKQLRAKLYEYEMQKKNADKQTAEDNKSDIGWGSQIRSYVLDDSR-IK 301
Query: 415 DLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
DLRT+ E + +VL+GDLD FI + L A L
Sbjct: 302 DLRTSVETRNTQAVLDGDLDRFIEASLKAGL 332
>gi|319405668|emb|CBI79291.1| peptide chain release factor RF-2 [Bartonella sp. AR 15-3]
Length = 332
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 151/319 (47%), Positives = 213/319 (66%), Gaps = 1/319 (0%)
Query: 124 LWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLT 183
LW+D A + RE +L M + F Q L E I++I + EEND + E+ +
Sbjct: 2 LWNDAQKAQDMMRERQNLEDSMNSTQLFAQRLEECIELIAMGEEENDVGIIAETENTIRQ 61
Query: 184 MRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTL 243
++ + +++++ LLSGE D Y+E+ AGAGGTES DWASM+L+MY WA++ +V +
Sbjct: 62 LKSEIDKRQIEMLLSGEADSNDTYLEIHAGAGGTESQDWASMLLRMYTRWAEQHKMKVEV 121
Query: 244 MDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPN 303
++ GE AGIK ATI V G A+G K E GVHRLVRISP+DS +RHTSFA++ V P
Sbjct: 122 LETHDGEEAGIKSATILVKGHNAYGLLKTESGVHRLVRISPYDSNSKRHTSFASIWVYP- 180
Query: 304 SGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNK 363
D + V ++E+D+RI+ +R+ GAGGQH NTTDSAVRI HI TGI CQ ERSQH+N+
Sbjct: 181 VVDENIEVDLSEADVRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNR 240
Query: 364 ASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVS 423
A+A +L++R+ + E+ ++ + S T+I WG+QIR+YVL PY++VKD RT E +
Sbjct: 241 ATAWSMLRARLYEEELKKREEETNAVEASKTEIGWGHQIRSYVLQPYQLVKDSRTGLENT 300
Query: 424 DPDSVLEGDLDGFILSYLS 442
DP +VL GDLD FI + L+
Sbjct: 301 DPQTVLNGDLDAFIEAALA 319
>gi|227499885|ref|ZP_03929978.1| peptide chain release factor RF2 [Anaerococcus tetradius ATCC
35098]
gi|227217994|gb|EEI83267.1| peptide chain release factor RF2 [Anaerococcus tetradius ATCC
35098]
Length = 333
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 155/330 (46%), Positives = 208/330 (63%), Gaps = 9/330 (2%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLA-----REENDTELELE 176
P+ W+D A +I + + E K E+ + +++D++ L +EE+ E
Sbjct: 8 PDFWNDSDKASQIMADLSLKKEDLNEYKKLEEGIRDNVDLLDLVELSDNKEEDTVNAVEE 67
Query: 177 SLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQR 236
SLEAL + K K L LSGE D +CYI + AGAGG E+ DWA M+ +MYK +
Sbjct: 68 SLEALYKLADKMK---LKTQLSGEYDKNNCYISINAGAGGLEATDWADMLFRMYKRYFDN 124
Query: 237 RGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFA 296
GY+ L D E GIK AT+ V G YA+GY K E GVHRLVRISPFDS RRHTSFA
Sbjct: 125 VGYKYELKDLNNEEAGGIKSATLHVKGPYAYGYLKGEKGVHRLVRISPFDSQSRRHTSFA 184
Query: 297 AVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNE 356
+V V P D + + I+ SDLRI+ +R+ GAGGQH N TDSAVRI HIPTG+ AT Q E
Sbjct: 185 SVDVFPEL-DDNLEIDIDPSDLRIDTYRASGAGGQHVNKTDSAVRITHIPTGVVATSQAE 243
Query: 357 RSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDL 416
RSQ QNK +AM +L S++ Q++ Q + + + I+WG+QIR+YV PY MVKD
Sbjct: 244 RSQIQNKQTAMNLLMSKLVQIKEEEQREKIEDIQGKYSQIAWGSQIRSYVFQPYTMVKDH 303
Query: 417 RTNYEVSDPDSVLEGDLDGFILSYLSASLD 446
RTNYE+ + ++V++GDL GFI +YL++ D
Sbjct: 304 RTNYEMGNVEAVMDGDLQGFIDAYLASKND 333
>gi|260581088|ref|ZP_05848909.1| peptide chain release factor 2 [Haemophilus influenzae RdAW]
gi|260092217|gb|EEW76159.1| peptide chain release factor 2 [Haemophilus influenzae RdAW]
Length = 351
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 150/335 (44%), Positives = 220/335 (65%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++ EL +P++W+DP A + +E SL + +K EQ L + +++LA E D
Sbjct: 19 RLEEVNGELEQPDVWNDPDKAQALGKERVSLEQVVNTIKNLEQGLEDVDGLLELAIEAED 78
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
+ E++ L + ++ ++ E + SGE D C CY+++QAG+GGTE+ DW M+L+MY
Sbjct: 79 EDTFNEAVAELDELEQQLEKLEFRRMFSGEHDACDCYVDLQAGSGGTEAQDWTEMLLRMY 138
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA+ +G++ LM+ G++AG+K ATIKV GEYAFG+ + E G+HRLVR SPFDS R
Sbjct: 139 LRWAESKGFKTELMEVSDGDVAGLKSATIKVSGEYAFGWLRTETGIHRLVRKSPFDSNNR 198
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSF+A V P ++IN +DLRI+ +R+ GAGGQH N T+SAVRI H+P+GI
Sbjct: 199 RHTSFSAAFVYPEID-DDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHMPSGIV 257
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+NK AM L++++ +LE+ ++ + +DI WG+QIR+YVL
Sbjct: 258 VQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDIGWGSQIRSYVLDDS 317
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E + +VL+GDLD FI + L A L
Sbjct: 318 R-IKDLRTGVENRNTQAVLDGDLDRFIEASLKAGL 351
>gi|384515159|ref|YP_005710251.1| peptide chain release factor RF-2 [Corynebacterium ulcerans 809]
gi|334696360|gb|AEG81157.1| peptide chain release factor RF-2 [Corynebacterium ulcerans 809]
Length = 367
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 163/347 (46%), Positives = 227/347 (65%), Gaps = 12/347 (3%)
Query: 95 SIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQE 154
++ I+K + + L R+ L + + P LWD+P HA +++ E S+ ++K++ Q
Sbjct: 15 TLTTIEKVMDPEELASRVRELEQQASDPTLWDNPDHAQKVTTELSSVQAQLKKLTGLRQR 74
Query: 155 LLEHIDMIKLAREEND-TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAG 213
+ + M +LA EE D TEL E L A LT +S E + +LSGE D I +++G
Sbjct: 75 IDDIPVMYELAEEEGDGTELADEEL-AELTAEIESLE--VKTMLSGEYDSREAVINIRSG 131
Query: 214 AGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAE 273
AGG ++ DWA M+++MY WA++ +V + D E AGIK AT V GEY +G E
Sbjct: 132 AGGVDAADWAEMLMRMYVRWAEKNDRKVDIYDISYAEEAGIKSATFVVHGEYMYGQLSVE 191
Query: 274 VGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHA 333
G HRLVRISPFD+ RR TSFA V V+P + + H+ I +S++R++ +RS G GGQ
Sbjct: 192 QGAHRLVRISPFDNQGRRQTSFAEVEVLPVV-EQTDHIDIPDSEVRVDVYRSSGPGGQSV 250
Query: 334 NTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ---AQMNAEHT 390
NTTDSAVR+ HIPTGI TCQNE+SQ QNKASAM VLQ+++ LE RQ A+++A
Sbjct: 251 NTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKL--LEKKRQEERAELDA--L 306
Query: 391 QSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
+ + SWGNQ+R+YVLHPY+MVKDLRTNYEV+DP VL+GD+DG +
Sbjct: 307 GAGGNASWGNQMRSYVLHPYQMVKDLRTNYEVNDPQKVLDGDIDGLL 353
>gi|227356361|ref|ZP_03840749.1| peptide chain release factor 2 [Proteus mirabilis ATCC 29906]
gi|227163471|gb|EEI48392.1| peptide chain release factor 2 [Proteus mirabilis ATCC 29906]
Length = 320
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 144/322 (44%), Positives = 216/322 (67%), Gaps = 2/322 (0%)
Query: 124 LWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLT 183
+W++P A + +E SL ++ + EQ L + ++ LA E +D E E++ L
Sbjct: 1 MWNEPEKAQALGKERSSLEAIVETIDQLEQGLEDVSGLLDLAVEADDEETFNEAVAELEG 60
Query: 184 MRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTL 243
+ +K ++ E + SGE D CY+++QAG+GGTE+ DWASM+++MY WA+ RG++ +
Sbjct: 61 LNKKLEQLEFRRMFSGEYDSADCYLDLQAGSGGTEAQDWASMLMRMYLRWAESRGFKTEI 120
Query: 244 MDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPN 303
++E G++AG+K ATIK+ GEYA+G+ + E GVHRLVR SPFDSG RRHTSF++ V P
Sbjct: 121 IEESDGDVAGLKSATIKIIGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPE 180
Query: 304 SGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNK 363
D + ++IN +DLRI+ +R+ GAGGQH N T+SAVRI H+PTG+ CQN+RSQH+NK
Sbjct: 181 V-DDNIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHVPTGLVTQCQNDRSQHKNK 239
Query: 364 ASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVS 423
AM +++++ +LE+ ++ + +DI WG+QIR+YVL R +KDLRT E
Sbjct: 240 DQAMKQMKAKLYELEMQKKNADKQVMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVETR 298
Query: 424 DPDSVLEGDLDGFILSYLSASL 445
+ +VL+GDLD FI + L A L
Sbjct: 299 NTQAVLDGDLDKFIEASLKAGL 320
>gi|168215798|ref|ZP_02641423.1| peptide chain release factor 2 [Clostridium perfringens NCTC 8239]
gi|182382266|gb|EDT79745.1| peptide chain release factor 2 [Clostridium perfringens NCTC 8239]
Length = 323
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 139/325 (42%), Positives = 215/325 (66%), Gaps = 2/325 (0%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
+ + WDD A +++E + K+ + K E ++ ++++K EEND E E +
Sbjct: 1 MQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNL-NERIDDVEVLKELMEENDEETAQEII 59
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
+ + ++ +++ +LSGE D + + G GG+++ DW M+L+MY W +++G
Sbjct: 60 SEVKALSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWCEKKG 119
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
Y + +D +PG+ AG+K T+KV GE+A+GY KAE G+HRLVRISPF++ +R TSFA+V
Sbjct: 120 YSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASV 179
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
V+P S ++IN DLRI+ +R+GGAGGQH N T+SAVRI HIPTGI CQNERS
Sbjct: 180 EVLPELT-SDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERS 238
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
Q N+ +AMG+L+S++ +L+ + + T L D+ WG+QIR+YV HPY MVKD RT
Sbjct: 239 QFSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKDHRT 298
Query: 419 NYEVSDPDSVLEGDLDGFILSYLSA 443
N+E S+ + V++GD+D FI++YL++
Sbjct: 299 NFETSNVNGVMDGDIDNFIIAYLNS 323
>gi|347359929|ref|YP_388297.2| peptide chain release factor 2 [Desulfovibrio alaskensis G20]
gi|342906465|gb|ABB38602.2| Peptide chain release factor 2 [Desulfovibrio alaskensis G20]
Length = 369
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 159/362 (43%), Positives = 224/362 (61%), Gaps = 13/362 (3%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
+S A+ Q + + RL RL + +L+ P+ W+ P + RE L +
Sbjct: 8 RSRGNALLQQFETLWGRLDHAQSKYRLEEIEKQLSSPDAWNAPEKLTPVLREKSQLENSV 67
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTEL--ELES----LEALLTMRRKSKEKELDALLSG 199
+ A Q + ++LA EEN E+ +LE LEALL +E E+ LLS
Sbjct: 68 ARLDALRQAKDDMQGWLELAEEENTQEVLEQLEEQAGILEALL------EETEVGLLLSA 121
Query: 200 ELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATI 259
E D + +E+ GAGGTE+ DWA M+L+MY WA+ ++ +D + G+ AGIK T+
Sbjct: 122 EEDKHAAILEIHPGAGGTEAQDWAEMLLRMYVRWAESHEFKAEYLDYLDGDEAGIKSVTL 181
Query: 260 KVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLR 319
K+DG A+G K E G+HRL+RISP+D+ RRHTSFA+V VIP++G+ T + I +SDLR
Sbjct: 182 KIDGTNAYGLLKGEKGIHRLIRISPYDASGRRHTSFASVDVIPDAGEEIT-IDIKDSDLR 240
Query: 320 IERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI 379
I+ FRS G GGQ NTT SAVR+ HIPTGITA CQNE+SQH NK +AM +L++R+ + EI
Sbjct: 241 IDIFRSSGPGGQSVNTTSSAVRVTHIPTGITAQCQNEKSQHHNKETAMQILRARLYEAEI 300
Query: 380 ARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILS 439
R+ S I WG+QIRTY L PYR+VKD R+N+EV D ++VL+G+LD + +
Sbjct: 301 RRRDAEKQADYASKEAIGWGSQIRTYTLQPYRLVKDHRSNFEVGDVEAVLDGELDALMRN 360
Query: 440 YL 441
+L
Sbjct: 361 HL 362
>gi|49474202|ref|YP_032244.1| peptide chain release factor 2 [Bartonella quintana str. Toulouse]
gi|49239706|emb|CAF26082.1| Peptide chain release factor 2 (rf-2 [Bartonella quintana str.
Toulouse]
Length = 322
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 149/310 (48%), Positives = 211/310 (68%), Gaps = 1/310 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + +++F + L E I++I + EE+D E+ ++ + ++ + ++++D
Sbjct: 3 RERQRLDDSISGIQSFTKTLEECIELIAMGEEESDVEIITDAENLIRNLKNEIDKRQIDM 62
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLS E DP Y+EV AGAGGTES DWASM+L+MY WA++ +V +++ GE AGIK
Sbjct: 63 LLSREADPNDTYLEVHAGAGGTESQDWASMLLRMYMRWAEQHKMKVEILEIHDGEEAGIK 122
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI V G A+G K E GVHRLVRISP+DS +RHTSFA++ V P D + V ++E
Sbjct: 123 SATIFVKGHNAYGLLKTESGVHRLVRISPYDSNAKRHTSFASIWVYP-VIDDNIEVDVSE 181
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD+RI+ +RS GAGGQH NTTDSAVRI HI TGI CQ ERSQH+N+A+A +L++R+
Sbjct: 182 SDVRIDTYRSSGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNRATAWSMLRARLY 241
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ ++ + S T+I WG+QIR+YVL PY++VKDLRT E +DP SVL G+LD
Sbjct: 242 EQELKKREEKTNAVESSKTEIGWGHQIRSYVLQPYQLVKDLRTGVENTDPQSVLNGNLDA 301
Query: 436 FILSYLSASL 445
FI + L+ +
Sbjct: 302 FIEAALAQRI 311
>gi|313893701|ref|ZP_07827268.1| peptide chain release factor 2 [Veillonella sp. oral taxon 158 str.
F0412]
gi|313441715|gb|EFR60140.1| peptide chain release factor 2 [Veillonella sp. oral taxon 158 str.
F0412]
Length = 330
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 142/323 (43%), Positives = 213/323 (65%), Gaps = 1/323 (0%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
++ P WD+P A IS+E L ++ K ++ + M+++A EE+D+ +E E
Sbjct: 1 MSDPTFWDNPDKAREISQEATQLKNAVESYKQLVSDIEDANVMLEMAIEEDDSSMESEIK 60
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
E + + +++E+ LLSGE D + + AGAGGTE+ DW SM+++MY WA++ G
Sbjct: 61 EYVKAIEETVEKQEVLLLLSGEYDANNAILTFHAGAGGTEAQDWCSMLIRMYLRWAEKSG 120
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
+ + LMDE PG+ AG K +T + GE AFGY K+E GVHRLVRISPFD+ RRHTSFAAV
Sbjct: 121 FSIELMDEQPGDEAGTKSSTFLIKGENAFGYLKSEKGVHRLVRISPFDAAARRHTSFAAV 180
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
V+P D + + I+ D++++ +R+ GAGGQH N TDSAVR+ H PTGI CQ +RS
Sbjct: 181 DVMPEI-DDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGIVVQCQTQRS 239
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
Q QN+ A+ +L++++ +LE+ +QA++ + + I WG+QIR+YV HPY +VKD RT
Sbjct: 240 QMQNREQALRLLRAKLFELELEKQAEIKEQIGGTYQAIEWGSQIRSYVFHPYNLVKDHRT 299
Query: 419 NYEVSDPDSVLEGDLDGFILSYL 441
N E + +V++G+LD FI +L
Sbjct: 300 NVETGNVQAVMDGNLDQFIEGFL 322
>gi|386262816|ref|YP_005816095.1| peptide chain release factor 2 [Chlamydia trachomatis Sweden2]
gi|389858155|ref|YP_006360397.1| peptide chain release factor 2 [Chlamydia trachomatis F/SW4]
gi|389859031|ref|YP_006361272.1| peptide chain release factor 2 [Chlamydia trachomatis E/SW3]
gi|389859907|ref|YP_006362147.1| peptide chain release factor 2 [Chlamydia trachomatis F/SW5]
gi|289525504|emb|CBJ14981.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis
Sweden2]
gi|380249227|emb|CCE14519.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis
F/SW5]
gi|380250102|emb|CCE13630.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis
F/SW4]
gi|380250980|emb|CCE12741.1| bacterial peptide chain release factor 2 [Chlamydia trachomatis
E/SW3]
Length = 368
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 153/335 (45%), Positives = 209/335 (62%), Gaps = 10/335 (2%)
Query: 112 LNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREE--- 168
L L + + WDD AG+IS L ++ E EL + I+ E+
Sbjct: 32 LKELEQQAVQDGFWDDVARAGKISERIARLKQQLSEF----NELKNKVSTIQFFLEDEES 87
Query: 169 -NDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVL 227
D E++ E + + +K E E LLSGELD SC++ + AGAGGTES DW M+L
Sbjct: 88 SKDLEMQKELEKEFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMLL 147
Query: 228 QMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDS 287
+MY WA +R+ ++D + GE+AGIK T+K+ GEYA+GYAKAE GVHRLVRISPFDS
Sbjct: 148 RMYMRWASSHSWRIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDS 207
Query: 288 GKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPT 347
+RHTSF +V V P D V+I D+RI+ +RS GAGGQH N TDSAVRI H PT
Sbjct: 208 NAKRHTSFVSVEVFPEI-DDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPT 266
Query: 348 GITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVL 407
GI +CQNERSQ QN+ + M +L++R+ Q + + + ++ +ISWG+QIR YV
Sbjct: 267 GIVVSCQNERSQIQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGSQIRNYVF 326
Query: 408 HPYRMVKDLRTNYEVSDPDSVLEGD-LDGFILSYL 441
PY +VKD+RT YEV + ++++G+ LD FI +YL
Sbjct: 327 QPYTLVKDVRTGYEVGNIQAMMDGELLDAFIKAYL 361
>gi|300860397|ref|ZP_07106484.1| peptide chain release factor 2, programmed frameshift [Enterococcus
faecalis TUSoD Ef11]
gi|300849436|gb|EFK77186.1| peptide chain release factor 2, programmed frameshift [Enterococcus
faecalis TUSoD Ef11]
Length = 366
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 154/354 (43%), Positives = 216/354 (61%), Gaps = 1/354 (0%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
+ Q I ++ L L + + +P WD+ A ++ E SL K ++
Sbjct: 13 MTQKITSFRRSLCLDQLEEDIAEAENRMGEPGFWDNTETAQKLINETNSLKEKYQQFHQL 72
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
+EL E M +L +EE D E++ E E + ++ + EL LL+ D + IE+
Sbjct: 73 SEELDELTVMFELQQEEYDAEIQEELEERIHLLQERLTTYELSLLLNEPYDHNNALIELH 132
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
GAGGTES DW SM+L+MY WA+ G++V +D G+ AGIK T+ + G A+GY K
Sbjct: 133 PGAGGTESQDWGSMLLRMYTRWAESHGFQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLK 192
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
+E GVHRLVRISPFDS KRRHTSF +V V+P D + + IN DL+I+ +R+ GAGGQ
Sbjct: 193 SEKGVHRLVRISPFDSAKRRHTSFCSVDVMPEL-DDTIEIAINPDDLKIDTYRASGAGGQ 251
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQ 391
H N T+SAVRI HIPTG Q +RSQ +N+ AM +L++++ QLE+ ++AQ A
Sbjct: 252 HINKTESAVRITHIPTGTVVASQAQRSQLKNREQAMSMLKAKLYQLEMEKKAQEAASLRG 311
Query: 392 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+I WG+QIR+YV HPY MVKD RTNYE + +V++GDLDGFI +YL L
Sbjct: 312 EQMEIGWGSQIRSYVFHPYSMVKDHRTNYETGNVQAVMDGDLDGFIDAYLKQRL 365
>gi|77164311|ref|YP_342836.1| peptide chain release factor 2 [Nitrosococcus oceani ATCC 19707]
gi|254433270|ref|ZP_05046778.1| peptide chain release factor 2 [Nitrosococcus oceani AFC27]
gi|76882625|gb|ABA57306.1| bacterial peptide chain release factor 2 (bRF-2) [Nitrosococcus
oceani ATCC 19707]
gi|207089603|gb|EDZ66874.1| peptide chain release factor 2 [Nitrosococcus oceani AFC27]
Length = 331
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 148/329 (44%), Positives = 216/329 (65%), Gaps = 4/329 (1%)
Query: 118 ELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELES 177
EL P++WD+P A ++ +E L + + E+++ ++ +LA EE D + E
Sbjct: 6 ELAVPSVWDEPERAQQLGQERAQLQSVVAPLAELGGEIIQVRELFELAMEEGDEDTAQEI 65
Query: 178 LEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRR 237
+ L + ++ + E + +GE+DP + Y+++QAG+GGTE+ DWA+M+L+MY W ++
Sbjct: 66 IAELDVVEQRLAKLEFQRMFAGEMDPNNAYLDIQAGSGGTEAQDWANMLLRMYLRWGEKH 125
Query: 238 GYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAA 297
++ L + GE+AGIK A I+ +GEYAFG+ + E GVHRLVR SPFDSG RRHTSFA+
Sbjct: 126 SFKTELTEVSEGEVAGIKSAAIRFEGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFAS 185
Query: 298 VAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNER 357
V V P D ++IN +DLRI+ +R+ GAGGQH N TDSAVRI H+P+ + CQ+ER
Sbjct: 186 VFVYPEV-DERIDIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHLPSSLVVQCQSER 244
Query: 358 SQHQNKASAMGVLQSRVNQLEIA-RQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDL 416
SQHQNKA AM L++++ +LE+ RQA+ A ++ DI WG+QIR YVL R +KDL
Sbjct: 245 SQHQNKAHAMAQLRAKLYELEMRNRQAEKQAAE-EAKADIGWGSQIRNYVLDQSR-IKDL 302
Query: 417 RTNYEVSDPDSVLEGDLDGFILSYLSASL 445
RT EV + VL+GDLD FI + L +
Sbjct: 303 RTGIEVGNTQGVLDGDLDSFIEASLKSGF 331
>gi|375290410|ref|YP_005124950.1| peptide chain release factor 2 [Corynebacterium diphtheriae 241]
gi|376245243|ref|YP_005135482.1| peptide chain release factor 2 [Corynebacterium diphtheriae HC01]
gi|371580081|gb|AEX43748.1| peptide chain release factor 2 [Corynebacterium diphtheriae 241]
gi|372107873|gb|AEX73934.1| peptide chain release factor 2 [Corynebacterium diphtheriae HC01]
Length = 369
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 158/355 (44%), Positives = 226/355 (63%), Gaps = 9/355 (2%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
+S + ++ I+K + + L R+ L + + P LWDDP A +++ E S+ K+
Sbjct: 6 QSAVTQLDSTLTTIEKVMNPEELESRVRELEQQASDPTLWDDPDTAQKVTTELSSVQAKL 65
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
K++ Q + + M +LA EE + L L E L + + E+ +LSGE D
Sbjct: 66 KKLSTLRQRIDDLPVMYELADEEGEDALVLAD-EELAELTADIEALEVKTMLSGEYDSRE 124
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
I +++GAGG ++ DWA M+++MY WA++ ++V + D E AGIK AT V GEY
Sbjct: 125 AVINIRSGAGGVDAADWAEMLMRMYTRWAEKNDHKVDIYDISYAEEAGIKSATFVVHGEY 184
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
+G E G HRLVRISPFD+ RR TSFA + V+P + + H+ I +S++R++ +RS
Sbjct: 185 MYGQLSVEQGAHRLVRISPFDNQGRRQTSFAEIEVLP-VVEQTDHIDIPDSEVRVDVYRS 243
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ--- 382
G GGQ NTTDSAVR+ HIPTGI TCQNE+SQ QNKASAM VLQ+++ LE RQ
Sbjct: 244 SGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKL--LERKRQEER 301
Query: 383 AQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
A+++A + + SWGNQ+R+YVLHPY+MVKDLRTNYEV+DP VL+GD+DG +
Sbjct: 302 AELDA--LGAGGNASWGNQMRSYVLHPYQMVKDLRTNYEVNDPQKVLDGDIDGLL 354
>gi|440527166|emb|CCP52650.1| peptide chain release factor 2 [Chlamydia trachomatis D/SotonD1]
gi|440529840|emb|CCP55324.1| peptide chain release factor 2 [Chlamydia trachomatis E/SotonE4]
gi|440530739|emb|CCP56223.1| peptide chain release factor 2 [Chlamydia trachomatis E/SotonE8]
gi|440531630|emb|CCP57140.1| peptide chain release factor 2 [Chlamydia trachomatis F/SotonF3]
gi|440535207|emb|CCP60717.1| peptide chain release factor 2 [Chlamydia trachomatis E/Bour]
Length = 329
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 151/323 (46%), Positives = 205/323 (63%), Gaps = 10/323 (3%)
Query: 124 LWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREE----NDTELELESLE 179
WDD AG+IS L ++ E EL + I+ E+ D E++ E +
Sbjct: 5 FWDDVARAGKISERIARLKQQLSEF----NELKNKVSTIQFFLEDEESSKDLEMQKELEK 60
Query: 180 ALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGY 239
+ +K E E LLSGELD SC++ + AGAGGTES DW M+L+MY WA +
Sbjct: 61 EFVFCEKKITEWETLRLLSGELDRNSCFLSINAGAGGTESCDWVEMLLRMYMRWASSHSW 120
Query: 240 RVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVA 299
R+ ++D + GE+AGIK T+K+ GEYA+GYAKAE GVHRLVRISPFDS +RHTSF +V
Sbjct: 121 RIEVIDRLDGEVAGIKHITLKLVGEYAYGYAKAESGVHRLVRISPFDSNAKRHTSFVSVE 180
Query: 300 VIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQ 359
V P D V+I D+RI+ +RS GAGGQH N TDSAVRI H PTGI +CQNERSQ
Sbjct: 181 VFPEI-DDKIEVEIRPGDIRIDTYRSSGAGGQHVNVTDSAVRITHFPTGIVVSCQNERSQ 239
Query: 360 HQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTN 419
QN+ + M +L++R+ Q + + + ++ +ISWG+QIR YV PY +VKD+RT
Sbjct: 240 IQNREACMNMLRARIYQKLLQERLEKQNIDRKNKKEISWGSQIRNYVFQPYTLVKDVRTG 299
Query: 420 YEVSDPDSVLEGD-LDGFILSYL 441
YEV + ++++G+ LD FI +YL
Sbjct: 300 YEVGNIQAMMDGELLDAFIKAYL 322
>gi|399923642|ref|ZP_10781000.1| hypothetical protein Prhi1_00305 [Peptoniphilus rhinitidis 1-13]
Length = 371
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 150/329 (45%), Positives = 211/329 (64%), Gaps = 5/329 (1%)
Query: 117 AELNK----PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTE 172
ELNK P WDD A +I E S K+ + + + + D+I+L E D
Sbjct: 36 VELNKKQMEPGFWDDNDSAQKIINETNSYQKKIDQYDELNKLITDAEDLIELMEIEEDYS 95
Query: 173 LELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKS 232
+ + + +K+ E +L+ LL+GE D + + + AGAGGTE+ DWASM+L+MY
Sbjct: 96 SYDDFRNLVEEIEKKTTEFKLNTLLNGEYDSHNAILSIHAGAGGTEAQDWASMLLRMYSR 155
Query: 233 WAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRH 292
+A+ +G+++ +D + + AGIK T+K+ G+ A+GY K E GVHRLVRISPFDS KRRH
Sbjct: 156 YAENKGFKIETLDILKEDEAGIKSVTLKISGDNAYGYLKGEKGVHRLVRISPFDSNKRRH 215
Query: 293 TSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITAT 352
TSF++V V P D T V+I E +L+I+ +RS GAGGQH NTTDSAVRI HIPTGI
Sbjct: 216 TSFSSVDVFPEL-DDDTDVEIKEEELKIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQ 274
Query: 353 CQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRM 412
CQNERSQ QN+ AM +L++++ L + + + + + I+WG+QIR+YV PY M
Sbjct: 275 CQNERSQIQNREKAMNMLKAKLIALAEEEKKEKIEDLQGNYSQIAWGSQIRSYVFQPYTM 334
Query: 413 VKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
VKD RTN +V D + V++GDLD FI +YL
Sbjct: 335 VKDHRTNIDVGDVEKVMDGDLDVFINAYL 363
>gi|381165911|ref|ZP_09875130.1| Peptide chain release factor 2 (RF-2) [Phaeospirillum molischianum
DSM 120]
gi|380684895|emb|CCG39942.1| Peptide chain release factor 2 (RF-2) [Phaeospirillum molischianum
DSM 120]
Length = 261
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 147/255 (57%), Positives = 188/255 (73%), Gaps = 3/255 (1%)
Query: 192 ELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEI 251
EL+ LLSGE D CYIE+ AGAGGTES DWA M+L+MY WA++ GY+V ++E PGE
Sbjct: 2 ELETLLSGEADRNDCYIEINAGAGGTESQDWAEMLLRMYTRWAEQHGYKVDWLEESPGEQ 61
Query: 252 AGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHV 311
AGIK AT++V G A+G+ K E GVHRLVRISP+DS RRHTSF++V V P D + +
Sbjct: 62 AGIKSATVRVAGHNAYGWLKTESGVHRLVRISPYDSAARRHTSFSSVWVYPVI-DDTIDI 120
Query: 312 QINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQ 371
Q+NESD RI+ +R+ GAGGQH N TDSAVRI H+PTGI A CQ ERSQHQN+A A +L+
Sbjct: 121 QVNESDCRIDTYRASGAGGQHVNKTDSAVRITHVPTGIVAACQMERSQHQNRARAWEMLR 180
Query: 372 SRVNQLEI-ARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLE 430
+R+ + E+ R+A A Q T+I WG+QIR+YVL PY+MVKDLRTN E SD VL+
Sbjct: 181 ARLYEAELQKREAAAQALEDQK-TEIGWGHQIRSYVLQPYQMVKDLRTNVETSDTQGVLD 239
Query: 431 GDLDGFILSYLSASL 445
GDLD F+ + L++ +
Sbjct: 240 GDLDLFMAASLASRV 254
>gi|15618982|ref|NP_224772.1| peptide chain release factor 2 [Chlamydophila pneumoniae CWL029]
gi|7388054|sp|P56906.1|RF2_CHLPN RecName: Full=Peptide chain release factor 2; Short=RF-2
Length = 369
Score = 297 bits (761), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 156/337 (46%), Positives = 215/337 (63%), Gaps = 12/337 (3%)
Query: 112 LNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDT 171
L +L E ++ N W D VHAG+IS + SL +++E QEL ID I+ E+ D
Sbjct: 33 LQVLEEESSEENFWQDSVHAGKISEQIVSLRRQIQEY----QELKSKIDAIEFFLEDADA 88
Query: 172 ELE----LESLEA-LLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMV 226
LE E LE L +K E LLSGE D SC++ + AGAGGTES DW M+
Sbjct: 89 -LEDPAICEDLEKEFLFCEKKLAVWETQRLLSGEADKNSCFLTINAGAGGTESCDWVEML 147
Query: 227 LQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFD 286
+MY WA + + + ++D + GE+ GIK T+K G YA+GYAKAE GVHRLVRISPFD
Sbjct: 148 FRMYSRWATKHQWALEVVDRLDGEVVGIKHVTVKFSGMYAYGYAKAERGVHRLVRISPFD 207
Query: 287 SGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIP 346
S +RHTSFA+V V P D ++I +DLRI+ FRS GAGGQH N T+SAVRI H+P
Sbjct: 208 SNGKRHTSFASVDVFPEI-DDQIKIEIRPNDLRIDTFRSSGAGGQHVNVTESAVRITHLP 266
Query: 347 TGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYV 406
+G+ +CQNERSQ QN+ S M +LQ+++ Q + + + + + +I+WG+QIR YV
Sbjct: 267 SGVVVSCQNERSQIQNRESCMKMLQAKLYQQVLQERLEKQSLDRKDKKEIAWGSQIRNYV 326
Query: 407 LHPYRMVKDLRTNYEVSDPDSVLEGD-LDGFILSYLS 442
PY +VKD+RT +E + ++L+G+ LD FI +YL+
Sbjct: 327 FQPYTLVKDVRTGHETGNVQAMLDGELLDEFIKAYLA 363
>gi|15836107|ref|NP_300631.1| peptide chain release factor 2 [Chlamydophila pneumoniae J138]
gi|8978947|dbj|BAA98782.1| peptide chain release factor 2 [Chlamydophila pneumoniae J138]
Length = 350
Score = 297 bits (761), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 156/337 (46%), Positives = 215/337 (63%), Gaps = 12/337 (3%)
Query: 112 LNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDT 171
L +L E ++ N W D VHAG+IS + SL +++E QEL ID I+ E+ D
Sbjct: 14 LQVLEEESSEENFWQDSVHAGKISEQIVSLRRQIQEY----QELKSKIDAIEFFLEDADA 69
Query: 172 ELE----LESLEA-LLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMV 226
LE E LE L +K E LLSGE D SC++ + AGAGGTES DW M+
Sbjct: 70 -LEDPAICEDLEKEFLFCEKKLAVWETQRLLSGEADKNSCFLTINAGAGGTESCDWVEML 128
Query: 227 LQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFD 286
+MY WA + + + ++D + GE+ GIK T+K G YA+GYAKAE GVHRLVRISPFD
Sbjct: 129 FRMYSRWATKHQWALEVVDRLDGEVVGIKHVTVKFSGMYAYGYAKAERGVHRLVRISPFD 188
Query: 287 SGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIP 346
S +RHTSFA+V V P D ++I +DLRI+ FRS GAGGQH N T+SAVRI H+P
Sbjct: 189 SNGKRHTSFASVDVFPEI-DDQIKIEIRPNDLRIDTFRSSGAGGQHVNVTESAVRITHLP 247
Query: 347 TGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYV 406
+G+ +CQNERSQ QN+ S M +LQ+++ Q + + + + + +I+WG+QIR YV
Sbjct: 248 SGVVVSCQNERSQIQNRESCMKMLQAKLYQQVLQERLEKQSLDRKDKKEIAWGSQIRNYV 307
Query: 407 LHPYRMVKDLRTNYEVSDPDSVLEGD-LDGFILSYLS 442
PY +VKD+RT +E + ++L+G+ LD FI +YL+
Sbjct: 308 FQPYTLVKDVRTGHETGNVQAMLDGELLDEFIKAYLA 344
>gi|148652647|ref|YP_001279740.1| peptide chain release factor 2 [Psychrobacter sp. PRwf-1]
gi|148571731|gb|ABQ93790.1| bacterial peptide chain release factor 2 (bRF-2) [Psychrobacter sp.
PRwf-1]
Length = 325
Score = 297 bits (761), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 146/327 (44%), Positives = 210/327 (64%), Gaps = 2/327 (0%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
+ P LW+DP A +IS+E L + + + L + M++LA E +D L E
Sbjct: 1 MASPELWNDPERATKISKEKSQLDAVITTITGLDTTLEDAAAMLELAVEADDEGLLEEVQ 60
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
L + ++ E + GE+D +C++++Q+G+GGTE+ DWA M+L+MY W + G
Sbjct: 61 NELNAAQALVEDLEFKRMFDGEMDANNCFVDIQSGSGGTEAQDWAEMLLRMYTRWCESHG 120
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
++V +++ G +AG+K A+ KV G+YAFG+ + E GVHRLVR SPFDS RHTSFAAV
Sbjct: 121 FKVEIIEVSAGSVAGVKSASFKVSGDYAFGWLRTETGVHRLVRKSPFDSNNGRHTSFAAV 180
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
V P D + IN +DLRI+ +RS GAGGQH NTTDSAVRI H+PTG CQNERS
Sbjct: 181 FVSPEI-DDDFEIDINPADLRIDTYRSSGAGGQHVNTTDSAVRITHVPTGTVVQCQNERS 239
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
QH NKA+AM +L++++ +LE+ ++ + + +D+ WG+QIR+YVL R +KDLRT
Sbjct: 240 QHGNKATAMKMLRAKLYELEMQKRMEQQQAVEDNKSDVGWGSQIRSYVLDDSR-IKDLRT 298
Query: 419 NYEVSDPDSVLEGDLDGFILSYLSASL 445
E + +VL+GDLD FI + L A L
Sbjct: 299 GVETFNTGAVLDGDLDQFIEASLKAGL 325
>gi|281185482|sp|Q0TNE1.2|RF2_CLOP1 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|255529900|gb|ABG84933.2| peptide chain release factor 2, programmed frameshift [Clostridium
perfringens ATCC 13124]
Length = 362
Score = 297 bits (761), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 140/329 (42%), Positives = 216/329 (65%), Gaps = 2/329 (0%)
Query: 115 LSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELE 174
L ++ + WDD A +++E + K+ + K E ++ ++++K EEND E
Sbjct: 36 LELKMQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNL-NERIDDVEVLKELMEENDEETA 94
Query: 175 LESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWA 234
E + + + ++ +++ +LSGE D + + G GG+++ DW M+L+MY W
Sbjct: 95 KEIISEVKALSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWC 154
Query: 235 QRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTS 294
+++GY + +D +PG+ AG+K T+KV GE+A+GY KAE G+HRLVRISPF++ +R TS
Sbjct: 155 EKKGYSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTS 214
Query: 295 FAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQ 354
FA+V V+P S ++IN DLRI+ +R+GGAGGQH N T+SAVRI HIPTGI CQ
Sbjct: 215 FASVEVLPELT-SDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQ 273
Query: 355 NERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVK 414
NERSQ N+ +AMG+L+S++ +L+ + + T L D+ WG+QIR+YV HPY MVK
Sbjct: 274 NERSQFSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVK 333
Query: 415 DLRTNYEVSDPDSVLEGDLDGFILSYLSA 443
D RTN E S+ + V++GD+D FI++YL++
Sbjct: 334 DHRTNVETSNVNGVMDGDIDNFIIAYLNS 362
>gi|440759700|ref|ZP_20938828.1| Peptide chain release factor 2 [Pantoea agglomerans 299R]
gi|436426594|gb|ELP24303.1| Peptide chain release factor 2 [Pantoea agglomerans 299R]
Length = 351
Score = 297 bits (761), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 151/335 (45%), Positives = 219/335 (65%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++AEL +P++W++P A + +E SL ++ + Q L + +++LA E D
Sbjct: 19 RLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVQTLDQMSQGLEDVQGLLELAVEAED 78
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
E E++ L + K E E + SGE D CYI++QAG+GGTE+ DWASM+++MY
Sbjct: 79 EETFNEAVAELDVLEGKLGELEFRRMFSGEYDSADCYIDLQAGSGGTEAQDWASMLMRMY 138
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA+ +G++ +++E GE+AGIK TI+V G+YAFG+ + E GVHRLVR SPFDSG R
Sbjct: 139 LRWAEAKGFKTEIIEESEGEVAGIKSVTIRVSGDYAFGWLRTETGVHRLVRKSPFDSGGR 198
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSF++ + P D + IN +DLRI+ +R+ GAGGQH N T+SAVRI HIPTG
Sbjct: 199 RHTSFSSAFIYPEV-DDDIDIDINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTGTV 257
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+NK AM +++++ +LE+ ++ + +DI WG+QIR+YVL
Sbjct: 258 TQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQALEDNKSDIGWGSQIRSYVLDDA 317
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E + +VL+GDLD FI + L A L
Sbjct: 318 R-IKDLRTGVETRNTQAVLDGDLDRFIEASLKAGL 351
>gi|408790270|ref|ZP_11201899.1| Peptide chain release factor 2 [Lactobacillus florum 2F]
gi|408520492|gb|EKK20538.1| Peptide chain release factor 2 [Lactobacillus florum 2F]
Length = 355
Score = 297 bits (761), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 146/337 (43%), Positives = 218/337 (64%), Gaps = 3/337 (0%)
Query: 109 NVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREE 168
N+ +N A++ P+ W++P A + + ++++ + L D +++ E
Sbjct: 16 NIAIN--EAKMATPDFWENPTQAQALIAVTNHDKERYNQLQSLAENLHSLQDTLEVLAEL 73
Query: 169 NDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQ 228
D ELE E + L T + + L LL+G+ D + +E+ +GAGGTE+ DW +M+L+
Sbjct: 74 PDAELEAEFNKELATEQEAVDQYRLSLLLNGKYDANNAIVEINSGAGGTEACDWTAMLLR 133
Query: 229 MYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSG 288
MY W ++ G++V ++ + PGE AGI + T+ V G A+GY K+E GVHRLVRISPFD+
Sbjct: 134 MYTRWGEQNGFQVAVVADQPGETAGISQVTLTVTGHNAYGYLKSEKGVHRLVRISPFDAA 193
Query: 289 KRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTG 348
RRHTSFA+V V+P D + V IN DLR++ FRS GAGGQH N T SAVRI H+PTG
Sbjct: 194 GRRHTSFASVDVLPEL-DETVQVTINPDDLRVDVFRSSGAGGQHINKTSSAVRITHLPTG 252
Query: 349 ITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLH 408
I + Q +RSQ QN+ +AM +L+S++ +LE+ +QAQ A+ +I WG+QIR+YV H
Sbjct: 253 IVTSSQAQRSQLQNRVTAMNMLKSKLYELELEKQAQEKAQLEGKQLEIGWGSQIRSYVFH 312
Query: 409 PYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
PY +VKD RTNYE ++ +V++GDL+ FI +YL +L
Sbjct: 313 PYTLVKDHRTNYETANGKAVMDGDLNPFITAYLQWNL 349
>gi|167628822|ref|YP_001679321.1| peptide chain release factor 2 [Heliobacterium modesticaldum Ice1]
gi|167591562|gb|ABZ83310.1| peptide chain release factor 2 [Heliobacterium modesticaldum Ice1]
Length = 333
Score = 297 bits (761), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 154/334 (46%), Positives = 214/334 (64%), Gaps = 9/334 (2%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
+ +P WDD A + +E L K+K + + + + +L EEND E+ E
Sbjct: 2 IQEPGFWDDTERAQKTMQELTGLKDKVKAYRDLRSQWEDLCVLRELGAEENDAEILAEIE 61
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
+ T+ + L+ LL+G D + + + AGAGGTE+MDW M+L+MY W ++RG
Sbjct: 62 AGIQTITAELDRWHLELLLNGPYDRNNALLTLHAGAGGTEAMDWNEMLLRMYIRWGEKRG 121
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
Y+V L+D +PG+ AGIK AT+ V GE A+GY K E+GVHRLVRISPFDS RRHTSFA++
Sbjct: 122 YKVELLDSLPGDEAGIKSATLSVVGENAYGYLKGEMGVHRLVRISPFDSSGRRHTSFASL 181
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
V+P D + +QI DL+++ FR+GGAGGQH N T+SAVRI HIPTGI CQ+ERS
Sbjct: 182 EVLPEVSDGA-EIQIRPEDLKVDTFRAGGAGGQHVNKTESAVRITHIPTGIVVACQSERS 240
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLT----DISWGNQIRTYVLHPYRMVK 414
Q QN+A+AM +LQ+++ RQ Q L DI++G+QIR+YV HPY +VK
Sbjct: 241 QIQNRATAMRMLQAKL----FERQRQEQEAEVNRLKGDQQDIAFGSQIRSYVFHPYNLVK 296
Query: 415 DLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKD 448
D RTN EV + +V++G+LD FI +YL S +D
Sbjct: 297 DHRTNTEVGNVHAVMDGELDEFISAYLVWSTKQD 330
>gi|90020863|ref|YP_526690.1| peptide chain release factor 2 [Saccharophagus degradans 2-40]
gi|89950463|gb|ABD80478.1| bacterial peptide chain release factor 2 (bRF-2) [Saccharophagus
degradans 2-40]
Length = 347
Score = 297 bits (761), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 148/335 (44%), Positives = 220/335 (65%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL + EL +P++WDDP A + E SL ++ ++ E + + +++++A EE+D
Sbjct: 15 RLAEVELELAEPDVWDDPARAQALGSERSSLELVVETIETLENGVADCRELLEMAIEESD 74
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
+ LE + E + SGE+DP + Y+++QAG+GGTE+ DWA M+L+MY
Sbjct: 75 EDSFLEICSEADRLEAHLATLEFRRMFSGEMDPNNAYLDIQAGSGGTEAQDWAEMLLRMY 134
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
W + +G++ TL + G++AGIK ATI+ +GEYAFG+ + E GVHRLVR SPFDSG R
Sbjct: 135 LRWGEDKGFKTTLEEASAGDVAGIKSATIRFEGEYAFGWLRTETGVHRLVRKSPFDSGNR 194
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSF++V V P D + ++IN++D+R + +R+ GAGGQH N TDSAVR+ H PTGI
Sbjct: 195 RHTSFSSVFVSPEI-DDNIDIEINKADVREDTYRASGAGGQHVNKTDSAVRLTHAPTGIV 253
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQ+ERSQH N+ A +L++RV + E+ ++ S +DI WG+QIR+YVL
Sbjct: 254 VQCQSERSQHSNRDKAWKMLRARVYEQEMQKRNAEKQALEDSKSDIGWGSQIRSYVLDDQ 313
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRTN + S+ ++VL+G LD FI++ L A L
Sbjct: 314 R-IKDLRTNVQTSNCNAVLDGKLDDFIVASLKAGL 347
>gi|343519799|ref|ZP_08756775.1| peptide chain release factor 2 [Haemophilus pittmaniae HK 85]
gi|343392355|gb|EGV04924.1| peptide chain release factor 2 [Haemophilus pittmaniae HK 85]
Length = 365
Score = 297 bits (761), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 150/335 (44%), Positives = 221/335 (65%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++AEL +P++W++P A + +E SL + +K+ EQ L + +++LA E D
Sbjct: 33 RLEEVNAELEQPDVWNEPEKAQALGKERVSLEQVVNTIKSLEQGLDDVEGLVELAVEAED 92
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
+ E++ L + ++ + E + SGE D C CY+++QAG+GGTE+ DW M+L+MY
Sbjct: 93 EDTFNEAVAELDELEQQLGKLEFRRMFSGEHDACDCYVDLQAGSGGTEAQDWTEMLLRMY 152
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA+ +G++ LM+ G++AG+K ATI+V GEYAFG+ + E G+HRLVR SPFDS R
Sbjct: 153 LRWAESKGFKTELMEVSDGDVAGLKSATIRVSGEYAFGWLRTETGIHRLVRKSPFDSNNR 212
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSFAA V P ++IN +DLRI+ +R+ GAGGQH N T+SAVRI H+P+GI
Sbjct: 213 RHTSFAAAFVYPEID-DDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHMPSGIV 271
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+NK AM L++++ +LE+ ++ + +DI WG+QIR+YVL
Sbjct: 272 VQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDIGWGSQIRSYVLDDA 331
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E + +VL+GDLD FI + L A L
Sbjct: 332 R-IKDLRTGVENRNTQAVLDGDLDRFIEASLKAGL 365
>gi|19552028|ref|NP_600030.1| peptide chain release factor 2 [Corynebacterium glutamicum ATCC
13032]
gi|62389691|ref|YP_225093.1| peptide chain release factor 2 [Corynebacterium glutamicum ATCC
13032]
gi|145294961|ref|YP_001137782.1| peptide chain release factor 2 [Corynebacterium glutamicum R]
gi|418246625|ref|ZP_12873019.1| peptide chain release factor 2 [Corynebacterium glutamicum ATCC
14067]
gi|24638152|sp|Q8NS78.1|RF2_CORGL RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|166223627|sp|A4QCD3.1|RF2_CORGB RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|21323567|dbj|BAB98194.1| Protein chain release factor B [Corynebacterium glutamicum ATCC
13032]
gi|41325026|emb|CAF19507.1| PEPTIDE CHAIN RELEASE FACTOR 2 [Corynebacterium glutamicum ATCC
13032]
gi|140844881|dbj|BAF53880.1| hypothetical protein [Corynebacterium glutamicum R]
gi|354509240|gb|EHE82175.1| peptide chain release factor 2 [Corynebacterium glutamicum ATCC
14067]
Length = 368
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 157/358 (43%), Positives = 232/358 (64%), Gaps = 12/358 (3%)
Query: 84 DWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
++ + + + ++ I+K L + ++ R+ L A+ P+LWDDP HA +++ E +
Sbjct: 4 EFSAELSELDSTLTTIEKVLNPQEMSDRVRELEAQAADPSLWDDPDHAQQVTSELSHVQA 63
Query: 144 KMKEVKAFEQELLEHIDMIKLAREEN-DTELELESLEALLTMRRKSKEKELDALLSGELD 202
+++++ Q + + M++LA EE+ DT + + E L +R E+ +LSGE D
Sbjct: 64 ELRKITDLRQRIEDLPIMVELAEEEDGDTSI---AEEELADLRSLIDALEVKTMLSGEYD 120
Query: 203 PCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVD 262
I +++GAGG ++ DWA M+++MY WA++ G++V + D E AGIK AT V
Sbjct: 121 AREAVINIRSGAGGVDAADWAEMLMRMYTRWAEKNGHKVDIYDISYAEEAGIKSATFVVH 180
Query: 263 GEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIER 322
G+Y +G E G HRLVRISPFD+ RR TSFA V V+P + + I ++D+R++
Sbjct: 181 GDYMYGQLSVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVV-EKVDSIDIPDADVRVDV 239
Query: 323 FRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ 382
+RS G GGQ NTTDSAVR+ HIPTGI TCQNE+SQ QNKASAM VLQ+++ LE RQ
Sbjct: 240 YRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKL--LERKRQ 297
Query: 383 ---AQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
A+M+A + + SWGNQ+R+YVLHPY+MVKDLRTN+EV+DP VL+GD+DG +
Sbjct: 298 EERAEMDA--LGAGGNASWGNQMRSYVLHPYQMVKDLRTNFEVNDPQKVLDGDIDGLL 353
>gi|110801299|ref|YP_696849.1| peptide chain release factor 2 [Clostridium perfringens ATCC 13124]
Length = 362
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 140/329 (42%), Positives = 216/329 (65%), Gaps = 2/329 (0%)
Query: 115 LSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELE 174
L ++ + WDD A +++E + K+ + K E ++ ++++K EEND E
Sbjct: 36 LELKMQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNL-NERIDDVEVLKELMEENDEETA 94
Query: 175 LESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWA 234
E + + + ++ +++ +LSGE D + + G GG+++ DW M+L+MY W
Sbjct: 95 KEIISEVKALSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWC 154
Query: 235 QRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTS 294
+++GY + +D +PG+ AG+K T+KV GE+A+GY KAE G+HRLVRISPF++ +R TS
Sbjct: 155 EKKGYSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTS 214
Query: 295 FAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQ 354
FA+V V+P S ++IN DLRI+ +R+GGAGGQH N T+SAVRI HIPTGI CQ
Sbjct: 215 FASVEVLPELT-SDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQ 273
Query: 355 NERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVK 414
NERSQ N+ +AMG+L+S++ +L+ + + T L D+ WG+QIR+YV HPY MVK
Sbjct: 274 NERSQFSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVK 333
Query: 415 DLRTNYEVSDPDSVLEGDLDGFILSYLSA 443
D RTN E S+ + V++GD+D FI++YL++
Sbjct: 334 DHRTNVETSNVNGVMDGDIDNFIIAYLNS 362
>gi|444377661|ref|ZP_21176870.1| Peptide chain release factor 2 [Enterovibrio sp. AK16]
gi|443678245|gb|ELT84917.1| Peptide chain release factor 2 [Enterovibrio sp. AK16]
Length = 347
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 147/335 (43%), Positives = 219/335 (65%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++AEL +P++W++P A + RE SL ++ + +Q ++++LA EEND
Sbjct: 15 RLEEVNAELEQPDVWNEPERAQALGRERASLEAVVETIDQLDQGGEYITELLELAVEEND 74
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
+ E L + K + E + SG+ D CYI++QAG+GGTE+ DW SM+L+MY
Sbjct: 75 QDTFDEIEPELSDLEEKLSKLEFRRMFSGDHDGSDCYIDLQAGSGGTEAQDWTSMMLRMY 134
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA +G++ +++ G++AG+K AT+++ GEYA+G+ + E GVHRLVR SPFDSG R
Sbjct: 135 LRWADAKGFKTEVIEVSEGDVAGLKSATVRISGEYAYGWLRTETGVHRLVRKSPFDSGGR 194
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSF++ + P D + + IN SDLRI+ +R+ GAGGQH NTT+SAVRI H+PT
Sbjct: 195 RHTSFSSAFIYPEV-DENIDIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHVPTNTV 253
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+NK AM L++++ +LE+ +Q + + +DI WG+QIR+YVL
Sbjct: 254 VQCQNDRSQHKNKDQAMKQLRAKLFELELQKQNAEKQANEAAKSDIGWGSQIRSYVLDDS 313
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E + +VL+GDLD FI + L + L
Sbjct: 314 R-IKDLRTGIENRNTQAVLDGDLDKFIEASLKSGL 347
>gi|187734757|ref|YP_001876869.1| peptide chain release factor 2 [Akkermansia muciniphila ATCC
BAA-835]
gi|187424809|gb|ACD04088.1| peptide chain release factor 2 [Akkermansia muciniphila ATCC
BAA-835]
Length = 329
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 150/325 (46%), Positives = 218/325 (67%), Gaps = 5/325 (1%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDM-IKLAREENDTELELES 177
++ P+ WDD A + E L +M+ A + L E ID I+LA+E +D +L E+
Sbjct: 1 MSAPDFWDDQNAARALMAEVNPLKHRMEAFSALKSRL-EDIDAAIELAQEADDDDLGREA 59
Query: 178 LEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRR 237
+E ++ + EL LL+G D SCY+ + AGAGGTE+ DWASM+L+MY W +RR
Sbjct: 60 VEEFARWQKSLADFELLTLLNGPQDQASCYVTIHAGAGGTEACDWASMLLRMYIRWCERR 119
Query: 238 GYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAA 297
G+ VT ++ G+ AGI+ T+KVDGEYA+GY K E G+HRLVRISPFDS +RHTSFA+
Sbjct: 120 GFSVTYLESTDGDDAGIRSVTLKVDGEYAYGYLKNERGIHRLVRISPFDSAGKRHTSFAS 179
Query: 298 VAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNER 357
+ P D S +++I + DL+++ +RSGG GGQ+ N ++AVRI HIP+G+ CQNER
Sbjct: 180 LDATPEVSD-SINIEILDKDLKVDTYRSGGKGGQNVNKVETAVRITHIPSGVIVACQNER 238
Query: 358 SQHQNKASAMGVLQSRVNQL-EIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDL 416
SQ +NK AM +L++++ Q+ E +QA+ + ++++ DI WGNQIR+YV PY+MVKDL
Sbjct: 239 SQLRNKEEAMNMLRAKLYQIEEDKKQAEADRQYSEK-GDIGWGNQIRSYVFQPYQMVKDL 297
Query: 417 RTNYEVSDPDSVLEGDLDGFILSYL 441
RT E + V++G+LD FI + L
Sbjct: 298 RTGVESGNIQDVMDGNLDPFIEAML 322
>gi|256545449|ref|ZP_05472811.1| peptide chain release factor 2, programmed [Anaerococcus vaginalis
ATCC 51170]
gi|256398845|gb|EEU12460.1| peptide chain release factor 2, programmed [Anaerococcus vaginalis
ATCC 51170]
Length = 369
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 147/352 (41%), Positives = 220/352 (62%), Gaps = 2/352 (0%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
+ +++ +I L + LN + + + + N WDD A I + K +F
Sbjct: 14 LDKNLDMIGSHLNPEKLNTEIKEIEKQTLEENFWDDSQKAQEIMADLSDKKDNFKTFTSF 73
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALL-TMRRKSKEKELDALLSGELDPCSCYIEV 210
++EL + D++ + E N+ L +E +L +++++ ++ L GE D + Y+ +
Sbjct: 74 KEELKDQSDLLDIIEESNEDLESLNEIEEILNSLKKEIGSFKIKTELDGEYDKNNAYLVI 133
Query: 211 QAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYA 270
AGAGG E+ DWA M+++MY + ++R ++ + D E GIK ATI V G +A+GY
Sbjct: 134 HAGAGGLEATDWAEMLMRMYTRFFEKRNFKFDVTDLNNEEAGGIKSATIHVKGSFAYGYL 193
Query: 271 KAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGG 330
K E GVHRLVRISPFDS KRRHTSFA+V + P D + V+I+ DLRI+ +R+ GAGG
Sbjct: 194 KGEKGVHRLVRISPFDSSKRRHTSFASVDIFPELNDDMS-VEIDPKDLRIDTYRASGAGG 252
Query: 331 QHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHT 390
QH N TDSAVRI HIPTG+ A+ Q ERSQ QNK +AM +L +++ Q++ + +
Sbjct: 253 QHVNKTDSAVRITHIPTGVIASSQAERSQTQNKETAMKLLLAKLTQIKEEEHREKIEDIQ 312
Query: 391 QSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
+ T I+WGNQIR+YV HPY +VKD RTN+EV + +SV++GD+DGFI YL+
Sbjct: 313 GNYTQIAWGNQIRSYVFHPYTLVKDHRTNFEVGNVESVMDGDIDGFIDEYLA 364
>gi|284008432|emb|CBA74885.1| peptide chain release factor 2 [Arsenophonus nasoniae]
Length = 332
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 145/331 (43%), Positives = 221/331 (66%), Gaps = 2/331 (0%)
Query: 115 LSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELE 174
++AEL +P++W++P A + +E SL ++ + A Q L + ++ LA E +D +
Sbjct: 4 VNAELEQPDVWNEPERAQALGKERSSLEAIVETIDALIQGLDDVSGLLDLAIEADDEDTF 63
Query: 175 LESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWA 234
E++ L + K + E + SG+ D +CY+++QAG+GGTE+ DWASM+++MY WA
Sbjct: 64 HEAVAELAQLEGKLGQLEFRRMFSGQYDSANCYLDLQAGSGGTEAQDWASMLMRMYLRWA 123
Query: 235 QRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTS 294
+ +G++ +++ G++AG+K ATIK+ GEYA+G+ + E GVHRLVR SPFDSG RRHTS
Sbjct: 124 ESKGFKTEIIEASDGDVAGLKSATIKIIGEYAYGWLRTETGVHRLVRKSPFDSGGRRHTS 183
Query: 295 FAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQ 354
F++ + P D ++IN +DLRI+ +R+ GAGGQH N T+SAVRI HIPTGI CQ
Sbjct: 184 FSSAFIYPEV-DDDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHIPTGIVTQCQ 242
Query: 355 NERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVK 414
N+RSQH+NK A L++++ +LE+ ++ ++ +DI WG+QIR+YVL R +K
Sbjct: 243 NDRSQHKNKDQAFKQLKAKLYELEMQKKNADKQALEENKSDIGWGSQIRSYVLDDSR-IK 301
Query: 415 DLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
DLRT E + +VL+GDLD FI + L A L
Sbjct: 302 DLRTGVENRNTQAVLDGDLDKFIEASLKAGL 332
>gi|375137430|ref|YP_004998079.1| peptide chain release factor 2 [Mycobacterium rhodesiae NBB3]
gi|359818051|gb|AEV70864.1| peptide chain release factor 2 [Mycobacterium rhodesiae NBB3]
Length = 371
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 159/358 (44%), Positives = 230/358 (64%), Gaps = 7/358 (1%)
Query: 84 DWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
D ++ AA+ ++ +++ L L R+ L E + PNLWDD A +++ E G
Sbjct: 4 DRQADIAALDSTLTTVERVLDVDGLRQRIEKLEHEASDPNLWDDQSRAQKVTSELSHTQG 63
Query: 144 KMKEVKAFEQELLEHIDMIKLAREEN---DTELELESLEALLTMRRKSKEKELDALLSGE 200
+++ V+ Q L + + +LA EE+ +E E E+ L +R + E+ LLSGE
Sbjct: 64 ELRRVEELRQRLDDLPVLYELAAEEDGAGASEAEAEADAELKKLREDLEAMEVRTLLSGE 123
Query: 201 LDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIK 260
D + +++GAGG ++ DWA M+++MY WA++ Y V + D E AGIK AT
Sbjct: 124 YDAREALVNIRSGAGGVDAADWAEMLMRMYIRWAEQHDYGVEVFDTSYAEEAGIKSATFA 183
Query: 261 VDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRI 320
V YA+G E G HRLVRISPFD+ RR TSFA V V+P + +++ H++I ESD+R+
Sbjct: 184 VHAPYAYGTLSVEQGTHRLVRISPFDNQGRRQTSFAEVEVLPVT-ETTDHIEIPESDVRV 242
Query: 321 ERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSR-VNQLEI 379
+ +RS G GGQ NTTDSAVR+ HIPTGI TCQNE+SQ QNK SAM VLQ++ + + +
Sbjct: 243 DVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLERKRL 302
Query: 380 ARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
+A+M+A + S + SWGNQ+R+YVLHPY+MVKDLRT YEV +P +VL+GD+DGF+
Sbjct: 303 EERAEMDALKSDSGS--SWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFL 358
>gi|385142948|emb|CCH23987.1| peptide chain release factor 2 [Corynebacterium glutamicum K051]
Length = 368
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 157/358 (43%), Positives = 232/358 (64%), Gaps = 12/358 (3%)
Query: 84 DWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
++ + + + ++ I+K L + ++ R+ L A+ P+LWDDP HA +++ E +
Sbjct: 4 EFSAELSELDSTLTTIEKVLNPQEMSDRVRELEAQAADPSLWDDPDHAQQVTSELSHVQA 63
Query: 144 KMKEVKAFEQELLEHIDMIKLAREEN-DTELELESLEALLTMRRKSKEKELDALLSGELD 202
+++++ Q + + M++LA EE+ DT + + E L +R E+ +LSGE D
Sbjct: 64 ELRKITDLRQRIEDLPIMVELAEEEDGDTSI---AEEELADLRSLIDALEVKTMLSGEYD 120
Query: 203 PCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVD 262
I +++GAGG ++ DWA M+++MY WA++ G++V + D E AGIK AT V
Sbjct: 121 TREAVINIRSGAGGVDAADWAEMLMRMYTRWAEKNGHKVDIYDISYAEEAGIKSATFVVH 180
Query: 263 GEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIER 322
G+Y +G E G HRLVRISPFD+ RR TSFA V V+P + + I ++D+R++
Sbjct: 181 GDYMYGQLSVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVV-EKVDSIDIPDADVRVDV 239
Query: 323 FRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ 382
+RS G GGQ NTTDSAVR+ HIPTGI TCQNE+SQ QNKASAM VLQ+++ LE RQ
Sbjct: 240 YRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKL--LERKRQ 297
Query: 383 ---AQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
A+M+A + + SWGNQ+R+YVLHPY+MVKDLRTN+EV+DP VL+GD+DG +
Sbjct: 298 EERAEMDA--LGAGGNASWGNQMRSYVLHPYQMVKDLRTNFEVNDPQKVLDGDIDGLL 353
>gi|119897788|ref|YP_933001.1| peptide chain release factor 2 [Azoarcus sp. BH72]
gi|119670201|emb|CAL94114.1| peptide chain release factor [Azoarcus sp. BH72]
Length = 373
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 152/337 (45%), Positives = 216/337 (64%), Gaps = 14/337 (4%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
+L ++ L P +W+D A + +E L G + ++ EQ+ + D+ LA E D
Sbjct: 41 KLEEVNRALEDPAVWNDAARAQELGKEKRQLEGVVLTLQQIEQQSADLKDLFDLADMEGD 100
Query: 171 ------TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWAS 224
E +L LEAL+ + E + S +DP +C+IE+QAGAGGTE+ DWA
Sbjct: 101 DDTFEAVEGDLVGLEALVG------QLEFRRMFSNPMDPNACFIEIQAGAGGTEAQDWAG 154
Query: 225 MVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISP 284
M+ +MY + +++G+ V LM+E GE+AGIK TIK G+YA+G+ + E G+HRLVR SP
Sbjct: 155 MLERMYLRYGEKKGFTVELMEETEGEVAGIKNCTIKFTGDYAYGFLRTETGIHRLVRKSP 214
Query: 285 FDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIH 344
FDS RRHTSF +V V P D S ++IN +DLRI+ +R+ GAGGQH N TDSAVRI H
Sbjct: 215 FDSNARRHTSFTSVFVYPEV-DDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITH 273
Query: 345 IPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRT 404
PTGI CQN+RSQH+NK AM +L++R+ +LE+ ++ + + +DI WG+QIR+
Sbjct: 274 QPTGIVVQCQNDRSQHRNKDEAMSMLKARLYELELRKRQAEQQKLEDAKSDIGWGHQIRS 333
Query: 405 YVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
YVL R +KDLRT YEV + +VL+GDL+ FI + L
Sbjct: 334 YVLDQSR-IKDLRTGYEVGNTQAVLDGDLEDFIAASL 369
>gi|302037377|ref|YP_003797699.1| peptide chain release factor 2 [Candidatus Nitrospira defluvii]
gi|300605441|emb|CBK41774.1| Peptide chain release factor 2 (RF-2) [Candidatus Nitrospira
defluvii]
Length = 377
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 154/339 (45%), Positives = 221/339 (65%), Gaps = 3/339 (0%)
Query: 108 LNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLARE 167
+ LN + + ++P+ W D A +++R +L ++ + E+ + +++LA E
Sbjct: 25 MTAELNDIEVKTSQPDFWKDTQAAAKVNRRKAALDRELSRWRDTERRQNDIEALLELALE 84
Query: 168 ENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVL 227
D LE E L L + + ++ LLSGELD + + GAGGTES DWA M+L
Sbjct: 85 SGDAGLEQELLAELEPFEKAVAQFRIELLLSGELDSSNAIFAIHPGAGGTESQDWAQMLL 144
Query: 228 QMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDS 287
+MY WA+++G++V +D + G+ AGIK AT+ V G YA+GY KAE GVHRLVRISPFD+
Sbjct: 145 RMYVRWAEQKGFKVETLDLLAGDEAGIKSATLSVSGPYAYGYLKAEAGVHRLVRISPFDA 204
Query: 288 GKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPT 347
KRRHTSFA+V V P D V I++ DLR++ FR+GGAGGQ+ N ++A+RI HIPT
Sbjct: 205 NKRRHTSFASVFVYPELED-DVQVVIDDKDLRVDTFRAGGAGGQNVNKVETAIRITHIPT 263
Query: 348 GITATCQNERSQHQNKASAMGVLQSRVNQLEI-ARQAQMNAEHTQSLTDISWGNQIRTYV 406
GI CQNERSQ QN+ AM +L++R+ ++E ++A+ NA + DI+WG+QIR+YV
Sbjct: 264 GIVVQCQNERSQLQNRNGAMKILKARLFEVEQRKKEAEFNAIVGEK-KDIAWGSQIRSYV 322
Query: 407 LHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
PY+MVKD RT YEV +V++G+LDGFI +YL L
Sbjct: 323 FQPYQMVKDHRTGYEVGQVSAVMDGELDGFIEAYLQRKL 361
>gi|148263843|ref|YP_001230549.1| peptide chain release factor 2 [Geobacter uraniireducens Rf4]
gi|146397343|gb|ABQ25976.1| bacterial peptide chain release factor 2 (bRF-2) [Geobacter
uraniireducens Rf4]
Length = 317
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 136/250 (54%), Positives = 180/250 (72%), Gaps = 1/250 (0%)
Query: 192 ELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEI 251
E +LSG D SC++ + +GAGGTES DWA M+L+MY + +R+G++ + D G+
Sbjct: 59 EFQKMLSGPHDASSCFVSINSGAGGTESQDWAEMLLRMYLRYCERKGWKTEITDYQAGDE 118
Query: 252 AGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHV 311
AG+K T V GEY +GY KAE G+HRLVRISPFDS RRHTSFA+V V P D V
Sbjct: 119 AGVKGVTFSVSGEYGYGYLKAEAGIHRLVRISPFDSNARRHTSFASVFVFPEIEDD-IEV 177
Query: 312 QINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQ 371
++NE+DLR++ FRS GAGGQH NTTDSA+RI HIP+GI CQ ERSQH NKA+AM VL+
Sbjct: 178 KVNEADLRVDTFRSSGAGGQHVNTTDSAIRITHIPSGIVVACQTERSQHMNKATAMRVLR 237
Query: 372 SRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEG 431
+++ + E+ + AE +I WG+QIR+YVLHPY+MVKDLRT E +PD+VL+G
Sbjct: 238 AKLYERELQERESQAAEIGGEKKEIGWGSQIRSYVLHPYKMVKDLRTGVESGNPDAVLDG 297
Query: 432 DLDGFILSYL 441
DL+ FI+++L
Sbjct: 298 DLEEFIVAFL 307
>gi|395779952|ref|ZP_10460420.1| peptide chain release factor 2 [Bartonella washoensis 085-0475]
gi|395419702|gb|EJF85998.1| peptide chain release factor 2 [Bartonella washoensis 085-0475]
Length = 322
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 148/307 (48%), Positives = 214/307 (69%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + +K+F ++L E +++I + EE+D E+ +++ ++ ++ + ++++D
Sbjct: 3 RERQRLDDAIGGIKSFTKKLEECVELIAMGEEESDIEIVIDAENSIRDLKNEIDKRQIDV 62
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE DP Y+EV AGAGGTES DWASM+L+MY WA++ +V +++ GE AGIK
Sbjct: 63 LLSGEADPNDTYLEVHAGAGGTESQDWASMLLRMYIRWAEQHKMKVEVLETHDGEEAGIK 122
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI + G A+G K E GVHRLVRISPFDS +RHTSFA++ V P D + V ++E
Sbjct: 123 SATILIKGYNAYGLLKTESGVHRLVRISPFDSNAKRHTSFASIWVYP-VIDDNIEVDVSE 181
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD+RI+ +R+ GAGGQH NTTDSA+RI HI TGI CQ ERSQH+N+A+A +L++R+
Sbjct: 182 SDVRIDTYRASGAGGQHVNTTDSAIRITHIKTGIVVQCQKERSQHKNRATAWSMLRARLY 241
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ ++ + S T+I WG+QIR+YVL PY++VKDLRT E +DP SVL G+LD
Sbjct: 242 EEELKKREEETNAVESSKTEIGWGHQIRSYVLQPYQLVKDLRTGVENTDPQSVLNGNLDA 301
Query: 436 FILSYLS 442
FI + L+
Sbjct: 302 FIEAALA 308
>gi|404393934|ref|ZP_10985738.1| peptide chain release factor 2 [Ralstonia sp. 5_2_56FAA]
gi|348615744|gb|EGY65255.1| peptide chain release factor 2 [Ralstonia sp. 5_2_56FAA]
Length = 310
Score = 297 bits (760), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 146/309 (47%), Positives = 213/309 (68%), Gaps = 4/309 (1%)
Query: 134 ISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEA-LLTMRRKSKEKE 192
+ RE SL + + +++L ++ +LAREE D E +E++EA MR ++ E
Sbjct: 1 MGREKKSLETVVLALTKLDEDLTGAAELFELAREEGDDET-IEAIEADTAGMRAIVEDME 59
Query: 193 LDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIA 252
+ SG +D +C+I++QAGAGGTE+ DWASM+L+ Y + +R+G++ +++E G++A
Sbjct: 60 FRRMFSGPMDAANCFIDIQAGAGGTEACDWASMLLRQYLKYCERKGFKTEVLEESEGDVA 119
Query: 253 GIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQ 312
GIK A+IKV+GEYAFG+ + E GVHRLVR SPFDS RHTSF+++ V P D S ++
Sbjct: 120 GIKSASIKVEGEYAFGFLRTETGVHRLVRKSPFDSAGGRHTSFSSIFVYPEV-DDSIEIE 178
Query: 313 INESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQS 372
+N +DLR++ +R+ GAGGQH N TDSAVRI HIPTGI CQN+RSQH+N+A AM +L+S
Sbjct: 179 VNPADLRVDTYRASGAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNRAEAMTMLKS 238
Query: 373 RVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGD 432
R+ + E+ ++ + TD+ WG+QIR+YVL R +KDLRTN E+S+ VL+GD
Sbjct: 239 RLYEHELRKRQAAADAQEAAKTDVGWGHQIRSYVLDQSR-IKDLRTNVEISNTQKVLDGD 297
Query: 433 LDGFILSYL 441
LD FI + L
Sbjct: 298 LDPFIQASL 306
>gi|395786399|ref|ZP_10466126.1| peptide chain release factor 2 [Bartonella tamiae Th239]
gi|423716708|ref|ZP_17690898.1| peptide chain release factor 2 [Bartonella tamiae Th307]
gi|395422697|gb|EJF88893.1| peptide chain release factor 2 [Bartonella tamiae Th239]
gi|395428782|gb|EJF94857.1| peptide chain release factor 2 [Bartonella tamiae Th307]
Length = 344
Score = 297 bits (760), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 159/332 (47%), Positives = 225/332 (67%), Gaps = 3/332 (0%)
Query: 112 LNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDT 171
+ L+ P+LW+D A + RE L + + Q L ++I++I+L EE+D
Sbjct: 1 MEFLNQRAEDPDLWNDAQQAQELMRERQRLDDSIHGINYLTQTLHDNIELIELGEEEDDE 60
Query: 172 ELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYK 231
+ ++ +A+ ++ + +++++D LLSGE D Y+EV AGAGGTES DWASM+L+MY
Sbjct: 61 RIVNDAEDAIRNLKIEIEKRQIDILLSGEADANDSYLEVHAGAGGTESQDWASMLLRMYT 120
Query: 232 SWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRR 291
WA++ G +V L++ GE AGIK AT+ + G A+G K E GVHRLVRISPFDS RR
Sbjct: 121 RWAEQHGMKVDLLELHDGEEAGIKSATLLIKGHNAYGMLKTESGVHRLVRISPFDSNARR 180
Query: 292 HTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITA 351
HTSFA++ V P D + V ++ESD+RI+ +R+ GAGGQH NTTDSAVRI HI TGI
Sbjct: 181 HTSFASIWVYP-VIDDNIEVDVSESDVRIDTYRASGAGGQHINTTDSAVRITHIATGIVV 239
Query: 352 TCQNERSQHQNKASAMGVLQSRVNQLEI-ARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQ ERSQH+N+A+A +L++R+ + E+ R+ + NA + TDI WG+QIR+YVL PY
Sbjct: 240 QCQAERSQHKNRAAAWSMLRARLYEEELKKREDEANAVEA-TKTDIGWGHQIRSYVLQPY 298
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
++VKDLRT E +DP +VL GDLD F+ + LS
Sbjct: 299 QLVKDLRTGVESTDPQNVLNGDLDRFMEASLS 330
>gi|407982835|ref|ZP_11163500.1| peptide chain release factor 2 [Mycobacterium hassiacum DSM 44199]
gi|407375566|gb|EKF24517.1| peptide chain release factor 2 [Mycobacterium hassiacum DSM 44199]
Length = 368
Score = 297 bits (760), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 159/357 (44%), Positives = 225/357 (63%), Gaps = 8/357 (2%)
Query: 84 DWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
D ++ AA+ ++ +++ L + R+ L P+LWDD A +I+ E G
Sbjct: 4 DRQADIAALDSTLTTVERVLDVDGMRKRIKELEELAADPHLWDDQDRAQKITSELSRTQG 63
Query: 144 KMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDP 203
+++ V+ + L + + +LA EEN + E+ L +R + E+ LLSGE D
Sbjct: 64 ELRRVEDLRRRLDDLPVLYELAEEENSADARDEADAELKRLREDIEAMEVRTLLSGEYDQ 123
Query: 204 CSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDG 263
+ +++GAGG ++ DWA M+++MY WA++ GY V ++D E AGIK AT V
Sbjct: 124 REALVTIRSGAGGVDAADWAEMLMRMYIRWAEKHGYPVEVLDTSYAEEAGIKSATFVVHA 183
Query: 264 EYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERF 323
YA+G E G HRLVRISPFD+ RR TSFA V V+P + + H+ I ES++R++ +
Sbjct: 184 PYAYGTLSVEQGTHRLVRISPFDNQSRRQTSFADVEVLPVV-EQTDHIDIPESEIRVDVY 242
Query: 324 RSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ- 382
RS G GGQ NTTDSAVRI H+PTGI TCQNE+SQ QNK SAM VLQ+++ LE RQ
Sbjct: 243 RSSGPGGQSVNTTDSAVRITHLPTGIVVTCQNEKSQLQNKLSAMRVLQAKL--LERKRQE 300
Query: 383 --AQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
A+++A +S SWGNQ+R+YVLHPY+MVKDLRT YEV +P +VL+GD+DGFI
Sbjct: 301 ERAELDA--LKSDGSASWGNQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDIDGFI 355
>gi|291613970|ref|YP_003524127.1| hypothetical protein Slit_1503 [Sideroxydans lithotrophicus ES-1]
gi|291584082|gb|ADE11740.1| conserved hypothetical protein [Sideroxydans lithotrophicus ES-1]
Length = 367
Score = 297 bits (760), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 159/360 (44%), Positives = 234/360 (65%), Gaps = 13/360 (3%)
Query: 91 AIAQSIQVIKKR-------LQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
A++ S+Q ++ R L + + RL ++ P +W+D A + RE SL
Sbjct: 8 ALSNSLQDLRNRSNELRRFLDFDSKQERLAEVNQLAEDPAIWNDAKRAQELGRERKSLED 67
Query: 144 KMKEVKAFEQELLEHIDMIKLAREENDTELELESLEA-LLTMRRKSKEKELDALLSGELD 202
+ + Q L + ++ ++A+ END + L S+ A + + + E + S D
Sbjct: 68 VVLGLIRISQNLDDAAELFEMAQAENDDD-SLNSIAADVQDIETRVAALEFRRMFSNPAD 126
Query: 203 PCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVD 262
P +C+I++QAGAGGTE+ DWASM+L+ Y + +R+G++V ++++ G++AGI+ A++KV+
Sbjct: 127 PNNCFIDIQAGAGGTEACDWASMLLRQYLKYCERKGFKVEVLEQTDGDVAGIRSASLKVE 186
Query: 263 GEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIER 322
GEYA+G+ + E GVHRLVR SPFDS RHTSFA++ V P D S V IN +DLRI+
Sbjct: 187 GEYAYGHLRTETGVHRLVRKSPFDSSGGRHTSFASLFVSPEV-DDSIEVDINPADLRIDT 245
Query: 323 FRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ 382
FR+ GAGGQH N TDSA+RI H PTGI CQN+RSQH+NKA AM +L+SR+ +LE+ R+
Sbjct: 246 FRASGAGGQHINKTDSAIRITHQPTGIVVQCQNDRSQHRNKAEAMSMLKSRLYELEL-RK 304
Query: 383 AQMNAEHTQ-SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
Q A+ + S TD+ WG+QIR+YVL R +KDLRTN E+S+ VL+GDLD FI + L
Sbjct: 305 RQSEADKLEASKTDVGWGHQIRSYVLDQSR-IKDLRTNVEISNTQKVLDGDLDPFIEASL 363
>gi|423080609|ref|ZP_17069229.1| peptide chain release factor 2 [Clostridium difficile 002-P50-2011]
gi|423085978|ref|ZP_17074411.1| peptide chain release factor 2 [Clostridium difficile 050-P50-2011]
gi|357548002|gb|EHJ29875.1| peptide chain release factor 2 [Clostridium difficile 050-P50-2011]
gi|357552982|gb|EHJ34745.1| peptide chain release factor 2 [Clostridium difficile 002-P50-2011]
Length = 338
Score = 297 bits (760), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 150/334 (44%), Positives = 223/334 (66%), Gaps = 5/334 (1%)
Query: 109 NVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHID-MIKLARE 167
N+++N ++NK + W+D A R+ +E+ SL ++E ++ + LLE I+ +I++ E
Sbjct: 3 NIQIN--EEKMNKQDFWNDNEVAQRVLQENKSLKETLEEYESL-KSLLEDIEVLIEIGLE 59
Query: 168 ENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVL 227
E+D +E + +++ +M K E ++ LL+GE D + + + AG GG ++ DWA M+L
Sbjct: 60 EDDDSVERDIEKSIESMEEKLSEMKIKTLLNGEYDKNNAILSINAGTGGLDAQDWAQMLL 119
Query: 228 QMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDS 287
+MY W++ +GY+V L+D + AGIK ATI V+G A+GY K+E GVHRLVRISPFD
Sbjct: 120 RMYIRWSESKGYKVKLLDIISDPEAGIKTATILVEGTNAYGYLKSEKGVHRLVRISPFDP 179
Query: 288 GKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPT 347
+RHTSFA++ V P D + V+IN SDL+I+ +R+ GAGGQH NTTDSAVRI HIPT
Sbjct: 180 SGKRHTSFASIDVTPEL-DENIEVEINPSDLKIDTYRASGAGGQHVNTTDSAVRITHIPT 238
Query: 348 GITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVL 407
G+ CQNERSQH NK AM +L +++ +L+ Q + + + I+WG+QIR+YV
Sbjct: 239 GVVVQCQNERSQHLNKDRAMRLLMAKLIELKELEQKEKIEDIQGKYSQITWGSQIRSYVF 298
Query: 408 HPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
PY++VKD RTN E + DSV+ G++D FI YL
Sbjct: 299 QPYKLVKDHRTNAEFGNVDSVMNGNIDLFINEYL 332
>gi|431931305|ref|YP_007244351.1| peptide chain release factor 2 [Thioflavicoccus mobilis 8321]
gi|431829608|gb|AGA90721.1| peptide chain release factor 2 [Thioflavicoccus mobilis 8321]
Length = 365
Score = 297 bits (760), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 154/347 (44%), Positives = 217/347 (62%), Gaps = 2/347 (0%)
Query: 99 IKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEH 158
++ L + RL + EL P +W DP A + RE +L + + + L +
Sbjct: 21 LRGYLDYAEKKDRLTEVLRELEDPEVWSDPERAQGLGRERATLEQVVVGLDELDAGLTDA 80
Query: 159 IDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTE 218
+++ +A EE D L ++ E E + SGE+D + ++++QAG+GGTE
Sbjct: 81 DELLAMAVEEGDEATVATICTDLEGFEQRVGELEFRRMFSGEMDANNAFVDIQAGSGGTE 140
Query: 219 SMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHR 278
+ DWA M+L+MY W +R G++ LM+ PGE+AGIK ATI+ +G YAFG+ + E+GVHR
Sbjct: 141 AQDWAEMLLRMYLRWGERHGFKTELMEVSPGEVAGIKSATIRFEGGYAFGWLRTEIGVHR 200
Query: 279 LVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDS 338
LVR SPFDSG RRHTSFAAV V P D S V+IN +DLRI+ +R+ GAGGQH N T+S
Sbjct: 201 LVRKSPFDSGNRRHTSFAAVFVSPEI-DDSVEVEINPADLRIDVYRASGAGGQHVNRTES 259
Query: 339 AVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISW 398
AVRI H PTGI CQN RSQHQNK AM L++++ +LE+ ++ +S +DI W
Sbjct: 260 AVRITHNPTGIVVQCQNGRSQHQNKDQAMRQLKAKLYELEMQKRRASQQAVEESKSDIGW 319
Query: 399 GNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
G+QIR+YVL R +KDLRT E ++ +VL+G LD FI + L + L
Sbjct: 320 GSQIRSYVLDQSR-IKDLRTGVETANTQAVLDGHLDPFIEASLKSGL 365
>gi|260904322|ref|ZP_05912644.1| peptide chain release factor 2 [Brevibacterium linens BL2]
Length = 372
Score = 297 bits (760), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 156/356 (43%), Positives = 230/356 (64%), Gaps = 6/356 (1%)
Query: 84 DWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
D+ + A + Q+ + I NL + ++ + + P+ WDDP A +IS G
Sbjct: 4 DYSAEIANLRQTYKAILDVSDLDNLRSEVAEMTEQASAPSFWDDPDSAQKISATLSHKQG 63
Query: 144 KMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDP 203
+++++ F + + + +I+++ +E D + ++E+ L + + E E+ LL+ E D
Sbjct: 64 TLEKLEKFGERIDDAELIIEMSEDEGDEDSKVEAERDLKKLHDQLAELEISTLLNHEYDE 123
Query: 204 CSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDG 263
S + V++GAGG ++ DWA M+++MY WA+ RGY V +D E AGIK ATI+V+
Sbjct: 124 RSAVVTVRSGAGGDDATDWAQMLIRMYVRWAENRGYNVQQLDTSYAEGAGIKSATIQVNA 183
Query: 264 EYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERF 323
YA+G E G HRLVRISPFD+ RR TSFAAV V+P +S+ HV+I+E+DLRI+ +
Sbjct: 184 PYAYGTLSVEAGTHRLVRISPFDNQGRRQTSFAAVEVVPLI-ESTDHVEIDENDLRIDVY 242
Query: 324 RSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQA 383
RS G GGQ NTTDSAVRI H PTG+ + QNE+SQ QN+ +AM VLQSR+ L++ R+
Sbjct: 243 RSSGPGGQSVNTTDSAVRITHAPTGVVVSMQNEKSQIQNREAAMRVLQSRL--LDLKRKE 300
Query: 384 QMNAEHTQSLTDI--SWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
+ AE + DI SWG+Q+R+YV HPY+MVKDLRT YEV++P +V +GDLDG I
Sbjct: 301 EA-AEKKELAGDIKASWGDQMRSYVTHPYQMVKDLRTGYEVNNPSNVFDGDLDGLI 355
>gi|404419999|ref|ZP_11001748.1| peptide chain release factor 2 [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
gi|403660566|gb|EJZ15129.1| peptide chain release factor 2 [Mycobacterium fortuitum subsp.
fortuitum DSM 46621]
Length = 372
Score = 297 bits (760), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 159/360 (44%), Positives = 227/360 (63%), Gaps = 11/360 (3%)
Query: 84 DWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
D ++ AA+ ++ +++ L L R+++L + + PNLWDD A +++ E
Sbjct: 4 DRQAAVAALDTTLTTVERVLDIDGLRQRIDMLEQQASDPNLWDDQSRAQKVTSELSHAQS 63
Query: 144 KMKEVKAFEQELLEHIDMIKLAREENDTELELESLEA---LLTMRRKSKEKELDALLSGE 200
+M+ V+ Q + + + +LA EE E + EA L+ +R + + E+ LLSGE
Sbjct: 64 EMRRVQDLRQRVDDLPVLFELAFEEAGAEGDDAVAEADAELVKLREEIETLEVRTLLSGE 123
Query: 201 LDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIK 260
D + +++GAGG ++ DWA M+++MY WA++ Y V + D E AGIK AT
Sbjct: 124 YDEREAVVTIRSGAGGVDAADWAEMLMRMYIRWAEKHDYPVEVFDTSYAEEAGIKSATFA 183
Query: 261 VDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRI 320
V +A+G E G HRLVRISPFD+ RR TSFA V V+P +++ H+ I E DLR+
Sbjct: 184 VHAPFAYGTLSVEQGTHRLVRISPFDNQSRRQTSFADVEVLPVV-ETTDHIDIPEGDLRV 242
Query: 321 ERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIA 380
+ +RS G GGQ NTTDSAVR+ HIPTGI TCQNE+SQ QNK +AM VLQ+R+ LE
Sbjct: 243 DVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMRVLQARL--LERK 300
Query: 381 RQ---AQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
RQ A+M+A + SWGNQ+R+YVLHPY+MVKDLRT YEV +P +VL+GD+DGF+
Sbjct: 301 RQEERAEMDALKGDGGS--SWGNQMRSYVLHPYQMVKDLRTEYEVGNPATVLDGDIDGFL 358
>gi|227832559|ref|YP_002834266.1| peptide chain release factor 2 [Corynebacterium aurimucosum ATCC
700975]
gi|262183572|ref|ZP_06042993.1| peptide chain release factor 2 [Corynebacterium aurimucosum ATCC
700975]
gi|254790912|sp|C3PES4.1|RF2_CORA7 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|227453575|gb|ACP32328.1| peptide chain release factor RF-2 [Corynebacterium aurimucosum ATCC
700975]
Length = 368
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 159/357 (44%), Positives = 231/357 (64%), Gaps = 20/357 (5%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
++ ++ I+K + + ++ R+ L A+ P+LWDDP HA +++ E + K++++ +
Sbjct: 12 LSATLTSIEKVMDPEAVSERVRELEAQAGDPSLWDDPDHAQKVTSELSAQQAKLRKLNSL 71
Query: 152 EQELLEHIDMIKLAREEND------TELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
+ + M +LA EE D E EL+ L A + + E+ +LSGE D
Sbjct: 72 RGRIEDLPVMSELAEEEGDEASQELVETELKELGAAI------ESLEVTTMLSGEYDERE 125
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
I +++GAGG ++ DWA M+++MY WA++ G++V + D E AGIK AT V GEY
Sbjct: 126 AVINIRSGAGGVDAADWAEMLMRMYTRWAEKNGHKVDVYDISYAEEAGIKSATFVVHGEY 185
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
+G E G HRLVRISPFD+ RR TSFA V V+P + + +++ +S++R++ +RS
Sbjct: 186 MYGQLSVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVV-EQTDSIEVPDSEVRVDVYRS 244
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ--- 382
G GGQ NTTDSAVR+ HIPTGI TCQNE+SQ QNKASAM VLQ+++ LE RQ
Sbjct: 245 SGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKL--LERKRQEER 302
Query: 383 AQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILS 439
A+++A + + SWGNQ+R+YVLHPY+MVKDLRTNYEV DP VL+GD+DGF+ S
Sbjct: 303 AELDA--LGAGGNASWGNQMRSYVLHPYQMVKDLRTNYEVGDPSKVLDGDIDGFLES 357
>gi|303229877|ref|ZP_07316653.1| peptide chain release factor 2 [Veillonella atypica
ACS-134-V-Col7a]
gi|303232076|ref|ZP_07318779.1| peptide chain release factor 2 [Veillonella atypica ACS-049-V-Sch6]
gi|401679864|ref|ZP_10811788.1| peptide chain release factor 2 [Veillonella sp. ACP1]
gi|302513182|gb|EFL55221.1| peptide chain release factor 2 [Veillonella atypica ACS-049-V-Sch6]
gi|302515433|gb|EFL57399.1| peptide chain release factor 2 [Veillonella atypica
ACS-134-V-Col7a]
gi|400218991|gb|EJO49862.1| peptide chain release factor 2 [Veillonella sp. ACP1]
Length = 330
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 144/323 (44%), Positives = 213/323 (65%), Gaps = 1/323 (0%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
++ P WD+P A IS+E L ++ K ++ + M+ +A EE DT +E E
Sbjct: 1 MSDPTFWDNPDKAREISQEATQLKNSVEGYKQLVSDIEDASVMLDMAIEEEDTSMEGEIK 60
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
+ + ++ +++E+ LL GE D + + AGAGGTE+ DW SM+++MY WA++ G
Sbjct: 61 QFVNGIQEAVEKQEVLLLLGGEYDQNNAILTFHAGAGGTEAQDWCSMLIRMYLRWAEKTG 120
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
+ V LMDE PG+ AGIK AT + GE AFGY K+E GVHRLVRISPFD+ RRHTSFAAV
Sbjct: 121 FSVELMDEQPGDEAGIKSATFLIKGENAFGYLKSEKGVHRLVRISPFDAAARRHTSFAAV 180
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
V+P D + + I+ D++++ +R+ GAGGQH N TDSAVR+ H PTGI CQ++RS
Sbjct: 181 DVMPEI-DDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGIVVQCQSQRS 239
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
Q QN+ A+ +L++++ +LE+ +QA++ + + I WG+QIR+YV HPY MVKD RT
Sbjct: 240 QMQNREQALRLLRAKLFELELEKQAELKEQIGGTYQAIEWGSQIRSYVFHPYNMVKDHRT 299
Query: 419 NYEVSDPDSVLEGDLDGFILSYL 441
+ E + +V++G++D FI YL
Sbjct: 300 SVETGNVQAVMDGNIDQFIEGYL 322
>gi|288817909|ref|YP_003432256.1| peptide chain release factor RF-2 [Hydrogenobacter thermophilus
TK-6]
gi|384128671|ref|YP_005511284.1| peptide chain release factor 2 [Hydrogenobacter thermophilus TK-6]
gi|288787308|dbj|BAI69055.1| peptide chain release factor RF-2 [Hydrogenobacter thermophilus
TK-6]
gi|308751508|gb|ADO44991.1| peptide chain release factor 2 [Hydrogenobacter thermophilus TK-6]
Length = 369
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 148/330 (44%), Positives = 218/330 (66%), Gaps = 2/330 (0%)
Query: 112 LNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDT 171
L + ++ N W+D A I++ L +KE + + L ++++ EE+
Sbjct: 32 LKKIDMSMSSTNFWEDQGKAKEITQRRKWLEETIKEFERIKSTLETLQELLEEVDEEDLE 91
Query: 172 ELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYK 231
L + + E + ++ + ++ E+ LS E+D + Y+ VQAGAGGTE+ DWASM+L+MY+
Sbjct: 92 TLSMIA-EEIQSVEKPIRDLEIKTFLSEEMDKNNAYLTVQAGAGGTEACDWASMLLRMYR 150
Query: 232 SWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRR 291
WA++ GY V ++D P ++AGIK AT+ + G YA+GY K E GVHRLVRISPFD+ RR
Sbjct: 151 RWAEKHGYEVEVIDINPDDVAGIKSATLLIKGPYAYGYLKGESGVHRLVRISPFDANARR 210
Query: 292 HTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITA 351
HTSFA+V+V+P D +++I E D+++E FR+ GAGGQ+ N TD+AVRI HIPTGIT
Sbjct: 211 HTSFASVSVVPQI-DEKINIEIREEDIQMETFRASGAGGQYVNKTDTAVRIRHIPTGITV 269
Query: 352 TCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYR 411
+CQ ERSQ QN+ A+ +L++++ QLE+ + + TDI WG QIR+YV PY+
Sbjct: 270 SCQQERSQFQNRLKALELLKAKLYQLELQKLEEKKKALEGEKTDIGWGYQIRSYVFQPYQ 329
Query: 412 MVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
MVKDLRT EV + D+V++GD+D FI YL
Sbjct: 330 MVKDLRTGLEVGNVDAVMDGDIDSFIEEYL 359
>gi|237786018|ref|YP_002906723.1| peptide chain release factor 2 [Corynebacterium kroppenstedtii DSM
44385]
gi|237758930|gb|ACR18180.1| peptide chain release factor RF-2 [Corynebacterium kroppenstedtii
DSM 44385]
Length = 379
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 155/351 (44%), Positives = 225/351 (64%), Gaps = 11/351 (3%)
Query: 95 SIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQE 154
++ I+K + +L ++ L A+ + P+LWDDP HA +++ + + ++K+V Q
Sbjct: 15 TLTTIEKVVDVDDLKDQVRELEAQASDPSLWDDPDHAQQVTSKLSHVQAQIKKVTTLRQR 74
Query: 155 LLEHIDMIKLA---REENDTELELESLEAL----LTMRRKSKEKELDALLSGELDPCSCY 207
+ + M +LA E DT+ E+ E T+R + + E+ +LSGE D
Sbjct: 75 VDDMPVMYELADDATEAGDTDAADEAREMADSERETLRHEIESLEVQTMLSGEYDEREAV 134
Query: 208 IEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAF 267
+ +++ AGG ++ DWA M+++MY W ++ G+++ + D E AGIK AT V G+Y +
Sbjct: 135 VNIRSAAGGVDAADWAEMLMRMYTRWTEQHGHKIDVFDISYAEEAGIKSATFIVHGDYMY 194
Query: 268 GYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGG 327
G E G HRLVRISPFD+ RR TSFA V V+P + + H+ I+E+D+R++ +RS G
Sbjct: 195 GQLSVEQGTHRLVRISPFDNQGRRQTSFAEVEVLP-VVEKTDHIDIDENDVRVDVYRSSG 253
Query: 328 AGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSR-VNQLEIARQAQMN 386
GGQ NTTDSAVR+ HIPTGI TCQNE+SQ QNKASAM VL ++ +++ QA+MN
Sbjct: 254 PGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLAAKLLDRKREEEQAEMN 313
Query: 387 AEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
A SWGNQ+R+YVLHPY+MVKDLRTNYEV+DP VL+GDLDGF+
Sbjct: 314 ALKGDGSN--SWGNQMRSYVLHPYQMVKDLRTNYEVNDPSKVLDGDLDGFL 362
>gi|258517064|ref|YP_003193286.1| peptide chain release factor 2 [Desulfotomaculum acetoxidans DSM
771]
gi|257780769|gb|ACV64663.1| bacterial peptide chain release factor 2 (bRF- 2) [Desulfotomaculum
acetoxidans DSM 771]
Length = 366
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 149/324 (45%), Positives = 209/324 (64%), Gaps = 9/324 (2%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
P WDD A +ISR+ L + Q L + + +LA+EE+D E+ + L
Sbjct: 42 PGFWDDQAQAQKISRQQAVLKDSVSLYGELRQSLEDLEVLAELAQEEDDDIALRETAKDL 101
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
+ + E ELD LLSGE D + I + AGAGGTE+ DW M+L+M+ WA+ YRV
Sbjct: 102 KQLELRVSELELDVLLSGEYDRGNAIISLHAGAGGTEAQDWVEMLLRMFTRWAEDHRYRV 161
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
++D + G+ AGIK T+++ G AFGY K+E GVHRLVRISPFD+ RRHTSFA+V V+
Sbjct: 162 IVLDMLSGDEAGIKSVTVEIVGPNAFGYLKSEKGVHRLVRISPFDTAGRRHTSFASVEVL 221
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D ++I DL+I+ FR+GGAGGQH N TDSAVRI H+PTGI +CQNERSQ
Sbjct: 222 PEV-DEDVDIEIKTEDLKIDTFRAGGAGGQHVNKTDSAVRITHLPTGIVVSCQNERSQLS 280
Query: 362 NKASAMGVLQSRVNQLEI----ARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLR 417
N+ SAM +L++++ +LE+ A A + +H + I+WG+QIR+YV HPY +VKD R
Sbjct: 281 NRNSAMKLLKAKLAELELQKKEAEMASLRGDHQE----IAWGSQIRSYVFHPYSLVKDHR 336
Query: 418 TNYEVSDPDSVLEGDLDGFILSYL 441
T E + ++V+ G+LD F+ ++L
Sbjct: 337 TGAETGNIEAVMNGELDKFMAAFL 360
>gi|357399593|ref|YP_004911518.1| Peptide chain release factor 2 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|386355632|ref|YP_006053878.1| peptide chain release factor 2 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|337766002|emb|CCB74713.1| Peptide chain release factor 2 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|365806140|gb|AEW94356.1| peptide chain release factor 2 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
Length = 368
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 162/364 (44%), Positives = 232/364 (63%), Gaps = 13/364 (3%)
Query: 77 ILDESEGDWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISR 136
ILD SE + KS ++ +++ I+ L + + +L + P+LWDDP +A +I+
Sbjct: 3 ILDASE-ELKS----LSSTMESIEAVLDLDKMRADVAMLEEQAAAPSLWDDPDNAQKITS 57
Query: 137 EHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDAL 196
L G++++ +A + + + +LA END + E+ L+++R+ E E+ L
Sbjct: 58 RLSYLQGELRKTEALRSRIEDLAVLFELAEAENDADTRAEAETELVSVRQAVDEMEVRTL 117
Query: 197 LSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKR 256
LSGE D + V+A AGG ++ D+A + +MY WA+R GY +++ E AGIK
Sbjct: 118 LSGEYDAREALVSVRAEAGGVDAADFAEQLQRMYLRWAERHGYPTEVLETSYAEEAGIKS 177
Query: 257 ATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINES 316
T V YA+G E G HRLVRISPFD+ RR TSFA V V+P + S HV+I+ES
Sbjct: 178 TTFAVKSPYAYGTLSVEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVV-EQSDHVEIDES 236
Query: 317 DLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQ 376
+LRI+ +RS G GGQ NTTDSAVRI H+PTGI +CQNERSQ QN+ASAM VLQ+++
Sbjct: 237 ELRIDVYRSSGPGGQGVNTTDSAVRITHLPTGIVVSCQNERSQIQNRASAMNVLQAKL-- 294
Query: 377 LEIAR---QAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDL 433
LE R QA+M+A SWGNQ+R+YVLHPY+MVKDLRT++EV +P +VL+G++
Sbjct: 295 LERRRQEEQAKMDALKGDGGN--SWGNQMRSYVLHPYQMVKDLRTDHEVGNPQAVLDGEI 352
Query: 434 DGFI 437
DGF+
Sbjct: 353 DGFL 356
>gi|308535208|ref|YP_002137819.2| peptide chain release factor 2 [Geobacter bemidjiensis Bem]
gi|308052553|gb|ACH38023.2| peptide chain release factor 2 [Geobacter bemidjiensis Bem]
Length = 371
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 148/352 (42%), Positives = 224/352 (63%), Gaps = 4/352 (1%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
+ + I ++ L+ + R+ L ++P+ W+D +A ++ R ++ + ++
Sbjct: 12 LTERIDKLRGSLEVDDKKERMQELEELTSRPDFWNDAENAQKVLRSRTAMEKDVTTWESL 71
Query: 152 EQELLEHIDMIKLAREEND--TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIE 209
+++ + ++I+L EE D T E+ ++ A L + E +LSG D ++
Sbjct: 72 DKQARDIKELIELGSEEQDEATLAEVAAMNAQLET--GVSQAEFRRMLSGPHDASGAFVS 129
Query: 210 VQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGY 269
+ +GAGGTES DWA M+L+MY + +++G++ + D G+ AG+K T V GE+A+GY
Sbjct: 130 INSGAGGTESQDWAEMLLRMYLRYCEKKGWKTEITDYQEGDGAGVKGVTFAVTGEFAYGY 189
Query: 270 AKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAG 329
KAE G+HRLVRISPFDS RRHTSFA+ V P + ++I ESDLRI+ +RS GAG
Sbjct: 190 LKAEAGIHRLVRISPFDSSARRHTSFASAFVFPVIEEEDIEIKIAESDLRIDTYRSSGAG 249
Query: 330 GQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEH 389
GQH NTTDSA+RI HIPTG CQ+ERSQH NKA+AM VL+S++ ++E+ + ++
Sbjct: 250 GQHVNTTDSAIRITHIPTGTVVACQSERSQHMNKATAMKVLRSKLYEMELREREAKASDI 309
Query: 390 TQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
+I WG+QIR+YVLHPY+MVKDLRT E +PD+VL+G LD F++ YL
Sbjct: 310 AGEKKEIGWGSQIRSYVLHPYKMVKDLRTGVESGNPDAVLDGSLDDFVVPYL 361
>gi|257092654|ref|YP_003166295.1| peptide chain release factor 2 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257045178|gb|ACV34366.1| peptide chain release factor 2 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 347
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 149/332 (44%), Positives = 220/332 (66%), Gaps = 4/332 (1%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
+L ++ EL P +WD+ A + RE SL + + L + ++ +AREE+D
Sbjct: 15 QLKTVARELEDPAVWDNAERAQELGRERRSLENVVLTLNRVADSLRDTGELFAMAREEDD 74
Query: 171 TELELESLEALLT-MRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
E L ++ A + + ++ E + + DP +C++++QAGAGGTE+ DWA+M+L+M
Sbjct: 75 DET-LNAVAADIDGIEKEVSGLEFRRMFNNPADPLNCFVDIQAGAGGTEAQDWAAMLLRM 133
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y +A+R+GY V +++E GE+AGIK A+IK+ GEYA+G ++E G+HRLVR SPFDS
Sbjct: 134 YLRYAERKGYAVEVLEESEGEVAGIKTASIKISGEYAYGMLRSETGIHRLVRKSPFDSNA 193
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RRHTSF +V+ P D S V+IN ++LRI+ +R+ GAGGQH N TDSAVRI H+PT I
Sbjct: 194 RRHTSFCSVSAYPEI-DDSFEVEINPAELRIDTYRASGAGGQHINKTDSAVRITHLPTNI 252
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHP 409
CQN+RSQH+N+A AM +L+SR+ + E+ ++ + + +DI WG+QIR+YVL
Sbjct: 253 VVQCQNDRSQHRNRAEAMAMLKSRIYEAEMRKRQTEQQKLEDAKSDIGWGHQIRSYVLDQ 312
Query: 410 YRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
R +KDLRTN EV + VL+GDLD FI + L
Sbjct: 313 SR-IKDLRTNVEVGNTQGVLDGDLDQFIEASL 343
>gi|257090077|ref|ZP_05584438.1| peptide chain release factor [Enterococcus faecalis CH188]
gi|312903512|ref|ZP_07762692.1| peptide chain release factor 2 [Enterococcus faecalis TX0635]
gi|422689171|ref|ZP_16747283.1| peptide chain release factor 2 [Enterococcus faecalis TX0630]
gi|422731554|ref|ZP_16787912.1| peptide chain release factor 2 [Enterococcus faecalis TX0645]
gi|256998889|gb|EEU85409.1| peptide chain release factor [Enterococcus faecalis CH188]
gi|310633388|gb|EFQ16671.1| peptide chain release factor 2 [Enterococcus faecalis TX0635]
gi|315162421|gb|EFU06438.1| peptide chain release factor 2 [Enterococcus faecalis TX0645]
gi|315577792|gb|EFU89983.1| peptide chain release factor 2 [Enterococcus faecalis TX0630]
Length = 327
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 150/327 (45%), Positives = 208/327 (63%), Gaps = 1/327 (0%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
+ +P WD+ A ++ E SL K ++ +EL E M +L +EE D E++ E
Sbjct: 1 MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELE 60
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
E + ++ + EL LL+ D + IE+ GAGGTES DW SM+L+MY WA+ G
Sbjct: 61 ERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHG 120
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
++V +D G+ AGIK T+ + G A+GY K+E GVHRLVRISPFDS KRRHTSF +V
Sbjct: 121 FQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
V+P D + + IN DL+I+ +R+ GAGGQH N T+SAVRI HIPTG Q +RS
Sbjct: 181 DVMPEL-DDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRS 239
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
Q +N+ AM +L++++ QLE+ ++AQ A +I WG+QIR+YV HPY MVKD RT
Sbjct: 240 QLKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRT 299
Query: 419 NYEVSDPDSVLEGDLDGFILSYLSASL 445
NYE + +V++GDLDGFI +YL L
Sbjct: 300 NYETGNVQAVMDGDLDGFIDAYLKQRL 326
>gi|365921384|ref|ZP_09445666.1| peptide chain release factor 2 [Cardiobacterium valvarum F0432]
gi|364576242|gb|EHM53578.1| peptide chain release factor 2 [Cardiobacterium valvarum F0432]
Length = 378
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 146/320 (45%), Positives = 214/320 (66%), Gaps = 2/320 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
P++WD+P A ++ +E +L+ ++ + A +Q L + D+I+LA E+D ++ +
Sbjct: 55 PSIWDNPEEATKLGQERAALISVVQGLDAIKQGLQDAFDLIELAEAEDDEATVNAAIADI 114
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
T + ++ E + +GELD + ++++QAG+GGTE+ DWASM+L+MY W + RGY+
Sbjct: 115 DTHEKHIEDLEFRRMFAGELDANNAFLDIQAGSGGTEAQDWASMLLRMYLRWGEARGYKT 174
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
L++E PG++AGIK ATI+ GEYA+G+ + E+GVHRLVR SPFDSG RRHTSFAAV V
Sbjct: 175 ELIEESPGDVAGIKSATIQFSGEYAYGWLRTEIGVHRLVRKSPFDSGNRRHTSFAAVFVS 234
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D + V IN +DLR + +R+ GAGGQH N T+SAVRI HIP+GI Q +RSQH
Sbjct: 235 PEI-DDNIEVDINPADLRTDVYRASGAGGQHVNRTESAVRITHIPSGIVVQSQQDRSQHI 293
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
N+ M L++++ LE+ ++ S +DI WGNQIR+YVL R +KDLRT YE
Sbjct: 294 NRDICMKQLRAKLYDLELQKRRASAQAIEDSKSDIGWGNQIRSYVLDQSR-IKDLRTGYE 352
Query: 422 VSDPDSVLEGDLDGFILSYL 441
S+ +VL+G LD F+ + L
Sbjct: 353 TSNTQAVLDGALDPFLQASL 372
>gi|429730352|ref|ZP_19265000.1| peptide chain release factor 2 [Corynebacterium durum F0235]
gi|429147943|gb|EKX90961.1| peptide chain release factor 2 [Corynebacterium durum F0235]
Length = 376
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 157/347 (45%), Positives = 225/347 (64%), Gaps = 12/347 (3%)
Query: 95 SIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQE 154
++ I+K L + R+ L A+ + P+LWDDP HA +++ + + +++ V Q
Sbjct: 23 ALTTIEKVLDLDGMAERVRELEAQASDPSLWDDPDHAQQVTSQLSHVQAELRRVTELRQR 82
Query: 155 LLEHIDMIKLAREENDTELELESL-EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAG 213
L + + + A EE D +E+ E +R + + E+ +LSGE D I +++G
Sbjct: 83 LDDLPILYEFAEEEGDG---IEAADEERAAVRAEIETLEVKTMLSGEYDAREALINIRSG 139
Query: 214 AGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAE 273
AGG ++ DWA M+L+MY WA++ GY V + D E AGIK AT V GEY +G E
Sbjct: 140 AGGVDAADWAEMLLRMYTRWAEKAGYSVDIYDISYAEEAGIKSATFVVHGEYTYGTLSVE 199
Query: 274 VGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHA 333
G HRLVRISPFD+ RR TSFA V V+P + + H+++ +S++R++ +RS G GGQ
Sbjct: 200 QGAHRLVRISPFDNQGRRQTSFAEVEVLPVV-EQTDHIEVPDSEIRVDVYRSSGPGGQSV 258
Query: 334 NTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ---AQMNAEHT 390
NTTDSAVR+ HIPTGI TCQNE+SQ QNKASAM VLQ+++ LE RQ A+++A
Sbjct: 259 NTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKL--LERKRQEERAELDA--L 314
Query: 391 QSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
+ + SWGNQ+R+YVLHPY+MVKDLRT YEV+DP VL+G++DGF+
Sbjct: 315 GAGGNASWGNQMRSYVLHPYQMVKDLRTKYEVNDPSQVLDGEIDGFL 361
>gi|296452520|ref|ZP_06894217.1| peptide chain release factor RF2 [Clostridium difficile NAP08]
gi|296881068|ref|ZP_06905011.1| peptide chain release factor RF2 [Clostridium difficile NAP07]
gi|296258625|gb|EFH05523.1| peptide chain release factor RF2 [Clostridium difficile NAP08]
gi|296427934|gb|EFH13838.1| peptide chain release factor RF2 [Clostridium difficile NAP07]
Length = 338
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 150/334 (44%), Positives = 222/334 (66%), Gaps = 5/334 (1%)
Query: 109 NVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHID-MIKLARE 167
N+++N ++NK + W+D A R+ +E+ SL ++E ++ + LLE I+ +I++ E
Sbjct: 3 NIQIN--EEKMNKQDFWNDNEVAQRVLQENKSLKETLEEYESL-KSLLEDIEVLIEIGLE 59
Query: 168 ENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVL 227
E D +E + +++ +M K E ++ LL+GE D + + + AG GG ++ DWA M+L
Sbjct: 60 EEDDSVERDIEKSIESMEEKLSEMKIKTLLNGEYDKNNAILSINAGTGGLDAQDWAQMLL 119
Query: 228 QMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDS 287
+MY W++ +GY+V L+D + AGIK ATI V+G A+GY K+E GVHRLVRISPFD
Sbjct: 120 RMYIRWSESKGYKVKLLDIISDPEAGIKTATILVEGTNAYGYLKSEKGVHRLVRISPFDP 179
Query: 288 GKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPT 347
+RHTSFA++ V P D + V+IN SDL+I+ +R+ GAGGQH NTTDSAVRI HIPT
Sbjct: 180 SGKRHTSFASIDVTPEL-DENIEVEINPSDLKIDTYRASGAGGQHVNTTDSAVRITHIPT 238
Query: 348 GITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVL 407
G+ CQNERSQH NK AM +L +++ +L+ Q + + + I+WG+QIR+YV
Sbjct: 239 GVVVQCQNERSQHLNKDRAMRLLMAKLIELKELEQKEKIEDIQGKYSQITWGSQIRSYVF 298
Query: 408 HPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
PY++VKD RTN E + DSV+ G++D FI YL
Sbjct: 299 QPYKLVKDHRTNAEFGNVDSVMNGNIDLFINEYL 332
>gi|229545626|ref|ZP_04434351.1| peptide chain release factor RF2 [Enterococcus faecalis TX1322]
gi|229549816|ref|ZP_04438541.1| peptide chain release factor RF2 [Enterococcus faecalis ATCC 29200]
gi|255972544|ref|ZP_05423130.1| peptide chain release factor 2 [Enterococcus faecalis T1]
gi|255975657|ref|ZP_05426243.1| peptide chain release factor 2 [Enterococcus faecalis T2]
gi|256619256|ref|ZP_05476102.1| peptide chain release factor 2 [Enterococcus faecalis ATCC 4200]
gi|256853316|ref|ZP_05558686.1| peptide chain release factor 2 [Enterococcus faecalis T8]
gi|256959169|ref|ZP_05563340.1| peptide chain release factor 2 [Enterococcus faecalis DS5]
gi|256964932|ref|ZP_05569103.1| peptide chain release factor 2 [Enterococcus faecalis HIP11704]
gi|257084989|ref|ZP_05579350.1| peptide chain release factor 2 [Enterococcus faecalis Fly1]
gi|257087047|ref|ZP_05581408.1| peptide chain release factor 2 [Enterococcus faecalis D6]
gi|257419489|ref|ZP_05596483.1| peptide chain release factor [Enterococcus faecalis T11]
gi|257422371|ref|ZP_05599361.1| peptide chain release factor [Enterococcus faecalis X98]
gi|307273028|ref|ZP_07554274.1| peptide chain release factor 2 [Enterococcus faecalis TX0855]
gi|307275776|ref|ZP_07556915.1| peptide chain release factor 2 [Enterococcus faecalis TX2134]
gi|307277873|ref|ZP_07558957.1| peptide chain release factor 2 [Enterococcus faecalis TX0860]
gi|307291799|ref|ZP_07571670.1| peptide chain release factor 2 [Enterococcus faecalis TX0411]
gi|312951693|ref|ZP_07770588.1| peptide chain release factor 2 [Enterococcus faecalis TX0102]
gi|384513438|ref|YP_005708531.1| peptide chain release factor RF2 [Enterococcus faecalis OG1RF]
gi|384518787|ref|YP_005706092.1| peptide chain release factor 2 [Enterococcus faecalis 62]
gi|422685792|ref|ZP_16744005.1| peptide chain release factor 2 [Enterococcus faecalis TX4000]
gi|422692827|ref|ZP_16750842.1| peptide chain release factor 2 [Enterococcus faecalis TX0031]
gi|422696613|ref|ZP_16754569.1| peptide chain release factor 2 [Enterococcus faecalis TX1346]
gi|422701958|ref|ZP_16759798.1| peptide chain release factor 2 [Enterococcus faecalis TX1342]
gi|422706472|ref|ZP_16764170.1| peptide chain release factor 2 [Enterococcus faecalis TX0043]
gi|422708665|ref|ZP_16766193.1| peptide chain release factor 2 [Enterococcus faecalis TX0027]
gi|422720723|ref|ZP_16777332.1| peptide chain release factor 2 [Enterococcus faecalis TX0017]
gi|422722022|ref|ZP_16778599.1| peptide chain release factor 2 [Enterococcus faecalis TX2137]
gi|422727247|ref|ZP_16783690.1| peptide chain release factor 2 [Enterococcus faecalis TX0312]
gi|422735925|ref|ZP_16792191.1| peptide chain release factor 2 [Enterococcus faecalis TX1341]
gi|422739198|ref|ZP_16794381.1| peptide chain release factor 2 [Enterococcus faecalis TX2141]
gi|424673023|ref|ZP_18109966.1| peptide chain release factor 2 [Enterococcus faecalis 599]
gi|428767253|ref|YP_007153364.1| similar to peptide chain release factor 2, C-terminal [Enterococcus
faecalis str. Symbioflor 1]
gi|430361793|ref|ZP_19426870.1| peptide chain release factor RF2 [Enterococcus faecalis OG1X]
gi|430368471|ref|ZP_19428212.1| peptide chain release factor RF2 [Enterococcus faecalis M7]
gi|229305085|gb|EEN71081.1| peptide chain release factor RF2 [Enterococcus faecalis ATCC 29200]
gi|229309284|gb|EEN75271.1| peptide chain release factor RF2 [Enterococcus faecalis TX1322]
gi|255963562|gb|EET96038.1| peptide chain release factor 2 [Enterococcus faecalis T1]
gi|255968529|gb|EET99151.1| peptide chain release factor 2 [Enterococcus faecalis T2]
gi|256598783|gb|EEU17959.1| peptide chain release factor 2 [Enterococcus faecalis ATCC 4200]
gi|256711775|gb|EEU26813.1| peptide chain release factor 2 [Enterococcus faecalis T8]
gi|256949665|gb|EEU66297.1| peptide chain release factor 2 [Enterococcus faecalis DS5]
gi|256955428|gb|EEU72060.1| peptide chain release factor 2 [Enterococcus faecalis HIP11704]
gi|256993019|gb|EEU80321.1| peptide chain release factor 2 [Enterococcus faecalis Fly1]
gi|256995077|gb|EEU82379.1| peptide chain release factor 2 [Enterococcus faecalis D6]
gi|257161317|gb|EEU91277.1| peptide chain release factor [Enterococcus faecalis T11]
gi|257164195|gb|EEU94155.1| peptide chain release factor [Enterococcus faecalis X98]
gi|306497065|gb|EFM66611.1| peptide chain release factor 2 [Enterococcus faecalis TX0411]
gi|306505270|gb|EFM74456.1| peptide chain release factor 2 [Enterococcus faecalis TX0860]
gi|306507468|gb|EFM76599.1| peptide chain release factor 2 [Enterococcus faecalis TX2134]
gi|306510013|gb|EFM79037.1| peptide chain release factor 2 [Enterococcus faecalis TX0855]
gi|310630410|gb|EFQ13693.1| peptide chain release factor 2 [Enterococcus faecalis TX0102]
gi|315027919|gb|EFT39851.1| peptide chain release factor 2 [Enterococcus faecalis TX2137]
gi|315029504|gb|EFT41436.1| peptide chain release factor 2 [Enterococcus faecalis TX4000]
gi|315031977|gb|EFT43909.1| peptide chain release factor 2 [Enterococcus faecalis TX0017]
gi|315037173|gb|EFT49105.1| peptide chain release factor 2 [Enterococcus faecalis TX0027]
gi|315145002|gb|EFT89018.1| peptide chain release factor 2 [Enterococcus faecalis TX2141]
gi|315152286|gb|EFT96302.1| peptide chain release factor 2 [Enterococcus faecalis TX0031]
gi|315156087|gb|EFU00104.1| peptide chain release factor 2 [Enterococcus faecalis TX0043]
gi|315158272|gb|EFU02289.1| peptide chain release factor 2 [Enterococcus faecalis TX0312]
gi|315167276|gb|EFU11293.1| peptide chain release factor 2 [Enterococcus faecalis TX1341]
gi|315169439|gb|EFU13456.1| peptide chain release factor 2 [Enterococcus faecalis TX1342]
gi|315174820|gb|EFU18837.1| peptide chain release factor 2 [Enterococcus faecalis TX1346]
gi|323480920|gb|ADX80359.1| peptide chain release factor 2 [Enterococcus faecalis 62]
gi|327535327|gb|AEA94161.1| peptide chain release factor RF2 [Enterococcus faecalis OG1RF]
gi|402352833|gb|EJU87669.1| peptide chain release factor 2 [Enterococcus faecalis 599]
gi|427185426|emb|CCO72650.1| similar to peptide chain release factor 2, C-terminal [Enterococcus
faecalis str. Symbioflor 1]
gi|429512346|gb|ELA01954.1| peptide chain release factor RF2 [Enterococcus faecalis OG1X]
gi|429516227|gb|ELA05721.1| peptide chain release factor RF2 [Enterococcus faecalis M7]
Length = 327
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 150/327 (45%), Positives = 208/327 (63%), Gaps = 1/327 (0%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
+ +P WD+ A ++ E SL K ++ +EL E M +L +EE D E++ E
Sbjct: 1 MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELE 60
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
E + ++ + EL LL+ D + IE+ GAGGTES DW SM+L+MY WA+ G
Sbjct: 61 ERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHG 120
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
++V +D G+ AGIK T+ + G A+GY K+E GVHRLVRISPFDS KRRHTSF +V
Sbjct: 121 FQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
V+P D + + IN DL+I+ +R+ GAGGQH N T+SAVRI HIPTG Q +RS
Sbjct: 181 DVMPEL-DDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRS 239
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
Q +N+ AM +L++++ QLE+ ++AQ A +I WG+QIR+YV HPY MVKD RT
Sbjct: 240 QLKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRT 299
Query: 419 NYEVSDPDSVLEGDLDGFILSYLSASL 445
NYE + +V++GDLDGFI +YL L
Sbjct: 300 NYETGNVQAVMDGDLDGFIDAYLKQRL 326
>gi|255654235|ref|ZP_05399644.1| peptide chain release factor 2 [Clostridium difficile QCD-23m63]
Length = 339
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 150/334 (44%), Positives = 222/334 (66%), Gaps = 5/334 (1%)
Query: 109 NVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHID-MIKLARE 167
N+++N ++NK + W+D A R+ +E+ SL ++E ++ + LLE I+ +I++ E
Sbjct: 4 NIQIN--EEKMNKQDFWNDNEVAQRVLQENKSLKETLEEYESL-KSLLEDIEVLIEIGLE 60
Query: 168 ENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVL 227
E D +E + +++ +M K E ++ LL+GE D + + + AG GG ++ DWA M+L
Sbjct: 61 EEDDSVERDIEKSIESMEEKLSEMKIKTLLNGEYDKNNAILSINAGTGGLDAQDWAQMLL 120
Query: 228 QMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDS 287
+MY W++ +GY+V L+D + AGIK ATI V+G A+GY K+E GVHRLVRISPFD
Sbjct: 121 RMYIRWSESKGYKVKLLDIISDPEAGIKTATILVEGTNAYGYLKSEKGVHRLVRISPFDP 180
Query: 288 GKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPT 347
+RHTSFA++ V P D + V+IN SDL+I+ +R+ GAGGQH NTTDSAVRI HIPT
Sbjct: 181 SGKRHTSFASIDVTPEL-DENIEVEINPSDLKIDTYRASGAGGQHVNTTDSAVRITHIPT 239
Query: 348 GITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVL 407
G+ CQNERSQH NK AM +L +++ +L+ Q + + + I+WG+QIR+YV
Sbjct: 240 GVVVQCQNERSQHLNKDRAMRLLMAKLIELKELEQKEKIEDIQGKYSQITWGSQIRSYVF 299
Query: 408 HPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
PY++VKD RTN E + DSV+ G++D FI YL
Sbjct: 300 QPYKLVKDHRTNAEFGNVDSVMNGNIDLFINEYL 333
>gi|328952688|ref|YP_004370022.1| hypothetical protein Desac_0974 [Desulfobacca acetoxidans DSM
11109]
gi|328453012|gb|AEB08841.1| hypothetical protein Desac_0974 [Desulfobacca acetoxidans DSM
11109]
Length = 369
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 154/359 (42%), Positives = 230/359 (64%), Gaps = 1/359 (0%)
Query: 83 GDWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLM 142
D K+ + ++Q ++ RL + RL + KP+ W + + +I +E G+L
Sbjct: 6 ADLKNRLSTLSQRYSQLRGRLDLEKKKARLAEIEVLAAKPDFWQNSSQSSQILKERGALT 65
Query: 143 GKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELD 202
+ + +++ + +++LA+EE D + ++ L L R ++ EL+ LL GE D
Sbjct: 66 HLLTVWQEQGKKIEDLEVLLELAQEETDEQAFVDVLTDLKVQERALQQLELEMLLGGEDD 125
Query: 203 PCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVD 262
I + AGAGGTE+ DWA M+L+MY +A+R+G+R + D +PG+ AG+K +T V
Sbjct: 126 DKDAIITIHAGAGGTEAQDWAEMLLRMYLRFAERQGFRTEIYDLLPGDEAGVKSSTFAVS 185
Query: 263 GEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIER 322
G +A+GY K+E G+HRLVRISPFD+ RRHTSFAAV V P + D + + E DLRI+
Sbjct: 186 GPHAYGYLKSESGIHRLVRISPFDASGRRHTSFAAVFVYPEA-DEDIQIDLQEKDLRIDT 244
Query: 323 FRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ 382
FR+ GAGGQH N T SAVR+ HIPTGI + QNERSQH+N+ AM VL+SR+ +LE +++
Sbjct: 245 FRASGAGGQHVNKTSSAVRLTHIPTGIVVSMQNERSQHRNRELAMRVLKSRLYELEKSKR 304
Query: 383 AQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
+ + DI+WG+QIR+YVL PYR++KD RT +E + ++VL+GDLD FI +YL
Sbjct: 305 QEKAQVVLDAQKDIAWGSQIRSYVLQPYRLIKDHRTKHEEGNVEAVLDGDLDAFIEAYL 363
>gi|257416283|ref|ZP_05593277.1| peptide chain release factor 2 [Enterococcus faecalis ARO1/DG]
gi|424761121|ref|ZP_18188703.1| peptide chain release factor 2 [Enterococcus faecalis R508]
gi|257158111|gb|EEU88071.1| peptide chain release factor 2 [Enterococcus faecalis ARO1/DG]
gi|402402590|gb|EJV35298.1| peptide chain release factor 2 [Enterococcus faecalis R508]
Length = 327
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 150/327 (45%), Positives = 208/327 (63%), Gaps = 1/327 (0%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
+ +P WD+ A ++ E SL K ++ +EL E M +L +EE D E++ E
Sbjct: 1 MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELE 60
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
E + ++ + EL LL+ D + IE+ GAGGTES DW SM+L+MY WA+ G
Sbjct: 61 ERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHG 120
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
++V +D G+ AGIK T+ + G A+GY K+E GVHRLVRISPFDS KRRHTSF +V
Sbjct: 121 FQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
V+P D + + IN DL+I+ +R+ GAGGQH N T+SAVRI HIPTG Q +RS
Sbjct: 181 DVMPEL-DDTIEIAINLDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRS 239
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
Q +N+ AM +L++++ QLE+ ++AQ A +I WG+QIR+YV HPY MVKD RT
Sbjct: 240 QLKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRT 299
Query: 419 NYEVSDPDSVLEGDLDGFILSYLSASL 445
NYE + +V++GDLDGFI +YL L
Sbjct: 300 NYETGNVQAVMDGDLDGFIDAYLKQRL 326
>gi|294791755|ref|ZP_06756903.1| peptide chain release factor 2 [Veillonella sp. 6_1_27]
gi|294793616|ref|ZP_06758753.1| peptide chain release factor 2 [Veillonella sp. 3_1_44]
gi|416999056|ref|ZP_11939725.1| peptide chain release factor 2 [Veillonella parvula
ACS-068-V-Sch12]
gi|294455186|gb|EFG23558.1| peptide chain release factor 2 [Veillonella sp. 3_1_44]
gi|294456985|gb|EFG25347.1| peptide chain release factor 2 [Veillonella sp. 6_1_27]
gi|333977209|gb|EGL78068.1| peptide chain release factor 2 [Veillonella parvula
ACS-068-V-Sch12]
Length = 330
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 143/323 (44%), Positives = 213/323 (65%), Gaps = 1/323 (0%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
++ P WD+P A IS+E L ++ K ++ + M+++A +E+D +E E
Sbjct: 1 MSDPTFWDNPDKAREISQEATQLKNAVESYKQLVSDIEDANMMLEMAIDEDDLSMESEIK 60
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
E + + +++E+ LLSGE D + + AGAGGTE+ DW SM+++MY WA++ G
Sbjct: 61 EYVKQIEETLEKQEVLLLLSGEYDANNAILTFHAGAGGTEAQDWCSMLIRMYLRWAEKSG 120
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
+ + LMDE PG+ AGIK AT V GE AFGY K+E GVHRLVRISPFD+ RRHTSFAAV
Sbjct: 121 FSIELMDEQPGDEAGIKSATFLVKGENAFGYLKSEKGVHRLVRISPFDAAARRHTSFAAV 180
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
V+P D + + I+ D++++ +R+ GAGGQH N TDSAVR+ H PTGI CQ +RS
Sbjct: 181 DVMPEI-DDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGIVVQCQTQRS 239
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
Q QN+ A+ +L++++ +LE+ +QA++ + + I WG+QIR+YV HPY +VKD RT
Sbjct: 240 QMQNREQALRLLRAKLFELELEKQAELKEQIGGTYQAIEWGSQIRSYVFHPYNLVKDHRT 299
Query: 419 NYEVSDPDSVLEGDLDGFILSYL 441
+ E + +V++G+LD FI +L
Sbjct: 300 SVETGNVQAVMDGNLDPFIEGFL 322
>gi|347525097|ref|YP_004831845.1| peptide Chain Release Factor 2 [Lactobacillus ruminis ATCC 27782]
gi|345284056|gb|AEN77909.1| Bacterial Peptide Chain Release Factor 2 [Lactobacillus ruminis
ATCC 27782]
Length = 358
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 148/332 (44%), Positives = 212/332 (63%), Gaps = 1/332 (0%)
Query: 117 AELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELE 176
+++ P+ W++ A ++ E+ L K E+ + + ++++ +EE+D EL E
Sbjct: 25 SKMADPDFWNNQEEAQKVINENNELKNKYDNFNQLEEAIEDLEVLLEMVQEEDDDELVSE 84
Query: 177 SLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQR 236
E ++K +E +L LL+G+ D + +E+ GAGGTES DW SM+L+MY WA++
Sbjct: 85 LSEKFELAQKKMQEYQLSLLLNGKYDKDNAILELHPGAGGTESQDWGSMLLRMYTRWAEQ 144
Query: 237 RGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFA 296
G+ V D G+ AGIK T+ + G A+GY ++E GVHRLVRISPFDS RRHTSF
Sbjct: 145 HGFSVETDDYQAGDEAGIKSVTLTISGHNAYGYLRSEKGVHRLVRISPFDSAGRRHTSFC 204
Query: 297 AVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNE 356
+V V+P D V + D+++E FRS GAGGQH N T SAVR+IHIPTGI + Q +
Sbjct: 205 SVNVMPEL-DDDVEVDLRPEDIKMEVFRSSGAGGQHINKTSSAVRLIHIPTGIVVSSQAQ 263
Query: 357 RSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDL 416
RSQ QN+A+A +L+S++ Q+E+ Q + A DI WG+QIR+YV HPY MVKD
Sbjct: 264 RSQFQNRATAEKMLRSKLYQMELEEQEKKRAAIQGEQLDIGWGSQIRSYVFHPYSMVKDH 323
Query: 417 RTNYEVSDPDSVLEGDLDGFILSYLSASLDKD 448
RTNYE + SV++GDLDGFI +YL +L K+
Sbjct: 324 RTNYETGNISSVMDGDLDGFINAYLQWNLKKE 355
>gi|333909080|ref|YP_004482666.1| hypothetical protein Mar181_2716 [Marinomonas posidonica
IVIA-Po-181]
gi|333479086|gb|AEF55747.1| hypothetical protein Mar181_2716 [Marinomonas posidonica
IVIA-Po-181]
Length = 364
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 150/349 (42%), Positives = 228/349 (65%), Gaps = 4/349 (1%)
Query: 98 VIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLE 157
++ L + + RL ++ EL N+W+DP +A ++ +E +L + + + L +
Sbjct: 19 TLRGYLDYDSKKERLEEVNRELEDSNVWNDPDYAQKLGKERSALEAVVDTLDGMDNGLAD 78
Query: 158 HIDMIKLAREENDTELELESLEALLTMRRKSKEK-ELDALLSGELDPCSCYIEVQAGAGG 216
+++ +A EEND E +E+++ L K E + S E+D S ++++Q+G+GG
Sbjct: 79 AKELLDIAVEEND-EDSVEAVQLELDELEGLLAKLEFRRMFSKEMDENSAFLDIQSGSGG 137
Query: 217 TESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGV 276
TE+ DWA+++L+MY W + +G++V L++ GE+AGIK ATI+ +GEYAFG+ + E GV
Sbjct: 138 TEAQDWANILLRMYLRWGEDKGFKVDLVEVSAGEVAGIKSATIRFEGEYAFGWLRTETGV 197
Query: 277 HRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTT 336
HRLVR SPFDSG RRHTSFA+V V P D + + IN +DLR + +RS GAGGQH NTT
Sbjct: 198 HRLVRKSPFDSGNRRHTSFASVFVSPEI-DDNVEIDINPADLRTDTYRSSGAGGQHVNTT 256
Query: 337 DSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDI 396
DSAVRI H+P+GI CQN+RSQH N+ AM L++++ +LE+ ++ + S +DI
Sbjct: 257 DSAVRITHLPSGIVVQCQNQRSQHANRDFAMKQLRAKLYELEMMKRTEAAQAVEDSKSDI 316
Query: 397 SWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
WG+QIR+YVL R +KDLRT E S+ +VL+G+LD FI++ L L
Sbjct: 317 GWGSQIRSYVLDSSR-IKDLRTGVESSNTGAVLDGNLDQFIVASLKQGL 364
>gi|312901832|ref|ZP_07761097.1| peptide chain release factor 2 [Enterococcus faecalis TX0470]
gi|311291025|gb|EFQ69581.1| peptide chain release factor 2 [Enterococcus faecalis TX0470]
Length = 327
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 150/327 (45%), Positives = 208/327 (63%), Gaps = 1/327 (0%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
+ +P WD+ A ++ E SL K ++ +EL E M +L +EE D E++ E
Sbjct: 1 MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELE 60
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
E + ++ + EL LL+ D + IE+ GAGGTES DW SM+L+MY WA+ G
Sbjct: 61 ERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHG 120
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
++V +D G+ AGIK T+ + G A+GY K+E GVHRLVRISPFDS KRRHTSF +V
Sbjct: 121 FQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
V+P D + + IN DL+I+ +R+ GAGGQH N T+SAVRI HIPTG Q +RS
Sbjct: 181 DVMPEL-DDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQVQRS 239
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
Q +N+ AM +L++++ QLE+ ++AQ A +I WG+QIR+YV HPY MVKD RT
Sbjct: 240 QLKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRT 299
Query: 419 NYEVSDPDSVLEGDLDGFILSYLSASL 445
NYE + +V++GDLDGFI +YL L
Sbjct: 300 NYETGNVQAVMDGDLDGFIDAYLKQRL 326
>gi|422869151|ref|ZP_16915671.1| peptide chain release factor 2 [Enterococcus faecalis TX1467]
gi|329571835|gb|EGG53513.1| peptide chain release factor 2 [Enterococcus faecalis TX1467]
Length = 327
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 150/327 (45%), Positives = 208/327 (63%), Gaps = 1/327 (0%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
+ +P WD+ A ++ E SL K ++ +EL E M +L +EE DTE++ E
Sbjct: 1 MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDTEIQEELE 60
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
E + ++ + EL LL+ D + IE+ GAGGTES DW SM+L+MY WA+ G
Sbjct: 61 ERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHG 120
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
++V +D G+ AGIK T+ + G A+GY K+E GVHRLVRI PFDS KRRHTSF +V
Sbjct: 121 FQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRILPFDSAKRRHTSFCSV 180
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
V+P D + + IN DL+I+ +R+ GAGGQH N T+SAVRI HIPTG Q +RS
Sbjct: 181 DVMPEL-DDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRS 239
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
Q +N+ AM +L++++ QLE+ ++AQ A +I WG+QIR+YV HPY MVKD RT
Sbjct: 240 QLKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRT 299
Query: 419 NYEVSDPDSVLEGDLDGFILSYLSASL 445
NYE + +V++GDLDGFI +YL L
Sbjct: 300 NYETGNVQAVMDGDLDGFIDAYLKQRL 326
>gi|160914511|ref|ZP_02076726.1| hypothetical protein EUBDOL_00517 [Eubacterium dolichum DSM 3991]
gi|158433669|gb|EDP11958.1| peptide chain release factor 2 [Eubacterium dolichum DSM 3991]
Length = 346
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 157/340 (46%), Positives = 218/340 (64%), Gaps = 19/340 (5%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHI-----DMIKLA 165
++ L+A + + W DP HA + ++ L G V+++EQ L+H + + L
Sbjct: 12 KIEELTARTMEESFWSDPQHAQTLIQQ---LNGLKDVVESYEQ--LDHALAGMEETLTLL 66
Query: 166 REENDTE----LELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMD 221
+++ DTE LE+E E M + ++ EL LLS E D + +E+ GAGGTES D
Sbjct: 67 KDDFDTEIFELLEMEYHE----MEERFEQFELKMLLSHEYDHSNAILELHPGAGGTESCD 122
Query: 222 WASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVR 281
WA M+ +MY WA+++GY+V+++D + G+ AGIK T V+G+ A+GY KAE GVHRLVR
Sbjct: 123 WADMLYRMYSRWAEKKGYKVSVLDYLAGDEAGIKSITFLVEGDMAYGYLKAEKGVHRLVR 182
Query: 282 ISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVR 341
ISPFDSG RRHTSFA++ V+P D ++I DL +E R+ GAGGQH N TDSA+R
Sbjct: 183 ISPFDSGGRRHTSFASLDVMPQFNDE-IEIEIRPEDLIVETKRASGAGGQHINKTDSAIR 241
Query: 342 IIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQ 401
++H PTG+ ATCQN RSQH+N+ A+ +L+SR+ Q I Q AE WG+Q
Sbjct: 242 MVHKPTGLVATCQNGRSQHENREEALRILKSRIYQKMIEEQEAKIAEIKGEQKANEWGSQ 301
Query: 402 IRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
IR+YV HPY MVKD RT YE SD SV++G+LD FI +YL
Sbjct: 302 IRSYVFHPYSMVKDHRTGYETSDTQSVMDGNLDAFIFAYL 341
>gi|257082363|ref|ZP_05576724.1| peptide chain release factor 2 [Enterococcus faecalis E1Sol]
gi|256990393|gb|EEU77695.1| peptide chain release factor 2 [Enterococcus faecalis E1Sol]
Length = 327
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 150/327 (45%), Positives = 208/327 (63%), Gaps = 1/327 (0%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
+ +P WD+ A ++ E SL K ++ +EL E M +L +EE D E++ E
Sbjct: 1 MGEPGFWDNIETAQKLINETNSLKEKYQQFHQLSEELDELTVMFELQQEEYDAEIQEELE 60
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
E + ++ + EL LL+ D + IE+ GAGGTES DW SM+L+MY WA+ G
Sbjct: 61 ERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHG 120
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
++V +D G+ AGIK T+ + G A+GY K+E GVHRLVRISPFDS KRRHTSF +V
Sbjct: 121 FQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
V+P D + + IN DL+I+ +R+ GAGGQH N T+SAVRI HIPTG Q +RS
Sbjct: 181 DVMPEL-DDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRS 239
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
Q +N+ AM +L++++ QLE+ ++AQ A +I WG+QIR+YV HPY MVKD RT
Sbjct: 240 QLKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRT 299
Query: 419 NYEVSDPDSVLEGDLDGFILSYLSASL 445
NYE + +V++GDLDGFI +YL L
Sbjct: 300 NYETGNVQAVMDGDLDGFIDAYLKQRL 326
>gi|332284056|ref|YP_004415967.1| peptide chain release factor 2 [Pusillimonas sp. T7-7]
gi|330428009|gb|AEC19343.1| peptide chain release factor 2 [Pusillimonas sp. T7-7]
Length = 359
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 151/337 (44%), Positives = 215/337 (63%), Gaps = 14/337 (4%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSL------MGKMKEVKAFEQELLEHIDMIKL 164
RL++++AEL P++W+DP HA + RE SL + + QEL +
Sbjct: 27 RLHVVNAELESPDVWNDPKHAQDLGREKKSLETVVHTLADIANGLTDAQELFDLAAEDDD 86
Query: 165 AREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWAS 224
E + ++ A L +E E + S DP +C++++QAGAGGTE+ DWAS
Sbjct: 87 DATLAAVEADTNAIGARL------EELEFRRMFSNPADPLNCFMDIQAGAGGTEAQDWAS 140
Query: 225 MVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISP 284
++L+ Y + + + ++ +++E G++AGIK ATIK++GEYAFG + E GVHRLVR SP
Sbjct: 141 ILLRQYLRYCEHKDFKTEVLEESDGDVAGIKSATIKIEGEYAFGLLRTETGVHRLVRKSP 200
Query: 285 FDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIH 344
FDS RHTSFA+V V P D S + IN +DLR++ +R+ GAGGQH N TDSAVRI H
Sbjct: 201 FDSANGRHTSFASVFVYPEV-DESVEIDINPADLRVDTYRASGAGGQHINKTDSAVRITH 259
Query: 345 IPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRT 404
+PTGI CQN+RSQH+N+A AM +L+SR+ +LE+ + + S TD+ WG+QIR+
Sbjct: 260 MPTGIVVQCQNDRSQHRNRAEAMSMLKSRLYELEMRNRMAEQQKMEDSKTDVGWGHQIRS 319
Query: 405 YVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
YVL R +KDLRTN E+S+ VL+GDLD FI + L
Sbjct: 320 YVLDQSR-IKDLRTNVEISNTQKVLDGDLDPFIQASL 355
>gi|253997054|ref|YP_003049118.1| hypothetical protein Mmol_1687 [Methylotenera mobilis JLW8]
gi|253983733|gb|ACT48591.1| hypothetical protein Mmol_1687 [Methylotenera mobilis JLW8]
Length = 367
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 152/370 (41%), Positives = 229/370 (61%), Gaps = 9/370 (2%)
Query: 72 ASQWTILDESEGDWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHA 131
A Q I+ GD +++ ++ L +++ + RL ++ L P +WDD +
Sbjct: 3 AEQLNIIANRLGD-------LSERNHALRGYLDFESKSQRLEEVNGLLEDPKIWDDNAKS 55
Query: 132 GRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEK 191
+ +E +L + + + L + ++ ++AREEND + L L + ++ E
Sbjct: 56 QALGKEKRTLELVVNTLIHVQGGLKDAQELFEMAREENDDDTLLSVEHDSLALEKEIAEM 115
Query: 192 ELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEI 251
E + SGELD +C+IE Q+G+GGTE+ DWA+M+L+MY + +R+G++V +++E G++
Sbjct: 116 EFRRMFSGELDSANCFIEFQSGSGGTEAQDWANMLLRMYLRYCERKGFKVEVLEESEGDV 175
Query: 252 AGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHV 311
AGIK A+IKV G+YA+G + E GVHRLVR SPFDS +RHTSFA+V + P D S +
Sbjct: 176 AGIKGASIKVSGDYAYGTLRTENGVHRLVRKSPFDSNAKRHTSFASVQIFPEV-DDSIEI 234
Query: 312 QINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQ 371
IN +DLR++ +R+ GAGGQH N TDSAVRI HIPT CQN+RSQH+N+ AM +L+
Sbjct: 235 DINPADLRVDTYRASGAGGQHINKTDSAVRITHIPTNTVVQCQNDRSQHRNREEAMNMLK 294
Query: 372 SRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEG 431
+ LE+ ++ Q + TDI WG+QIR+YVL R +KDLRT E+ + VL+G
Sbjct: 295 GALYNLELNKRNQEKQALEDAKTDIGWGHQIRSYVLDQSR-IKDLRTGVEIGNTQGVLDG 353
Query: 432 DLDGFILSYL 441
DLD FI L
Sbjct: 354 DLDPFITESL 363
>gi|304396712|ref|ZP_07378592.1| peptide chain release factor 2 [Pantoea sp. aB]
gi|304355508|gb|EFM19875.1| peptide chain release factor 2 [Pantoea sp. aB]
Length = 351
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 151/335 (45%), Positives = 218/335 (65%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++AEL +P +W++P A + +E SL ++ + Q L + +++LA E D
Sbjct: 19 RLEEVNAELEQPYVWNEPERAQALGKERSSLEAIVQTLDQMSQGLEDVQGLLELAVEAED 78
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
E E++ L + K E E + SGE D CYI++QAG+GGTE+ DWASM+++MY
Sbjct: 79 EETFDEAVAELDVLEGKLGELEFRRMFSGEYDSADCYIDLQAGSGGTEAQDWASMLMRMY 138
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA+ +G++ +++E GE+AGIK TI+V G+YAFG+ + E GVHRLVR SPFDSG R
Sbjct: 139 LRWAEAKGFKTEIIEESEGEVAGIKSVTIRVSGDYAFGWLRTETGVHRLVRKSPFDSGGR 198
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSF++ + P D + IN +DLRI+ +R+ GAGGQH N T+SAVRI HIPTG
Sbjct: 199 RHTSFSSAFIYPEV-DDDIDIDINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTGTV 257
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+NK AM +++++ +LE+ ++ + +DI WG+QIR+YVL
Sbjct: 258 TQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQALEDNKSDIGWGSQIRSYVLDDA 317
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E + +VL+GDLD FI + L A L
Sbjct: 318 R-IKDLRTGVETRNTQAVLDGDLDRFIEASLKAGL 351
>gi|421858651|ref|ZP_16290915.1| protein chain release factor B [Paenibacillus popilliae ATCC 14706]
gi|410831824|dbj|GAC41352.1| protein chain release factor B [Paenibacillus popilliae ATCC 14706]
Length = 340
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 148/324 (45%), Positives = 212/324 (65%), Gaps = 1/324 (0%)
Query: 118 ELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELES 177
+++ P+ WDD A + E ++ G ++E + +Q+ + M++LA EE+D L E
Sbjct: 8 KMSAPDFWDDNERAQGMISELNAIKGIVEEYSSLQQDYEDTQMMLELADEEHDEGLAQEL 67
Query: 178 LEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRR 237
E + + + ++ EL LLS D + +E+ GAGGTES DW M+L+MY WA++R
Sbjct: 68 GEGVKQLYGRVEQFELQLLLSEPYDKMNAILELHPGAGGTESQDWGQMLLRMYTRWAEQR 127
Query: 238 GYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAA 297
G++V ++D +PG+ AGIK T+ + G A+GY KAE GVHRLVRISPFDS RRHTSF +
Sbjct: 128 GFKVEVLDYLPGDEAGIKSVTLLIKGYNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 187
Query: 298 VAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNER 357
V+P D +++ DL+I+ +R+ GAGGQH NTTDSAVRI HIPTGI TCQ ER
Sbjct: 188 CDVVPEITD-DVDIEVRNEDLKIDTYRASGAGGQHINTTDSAVRITHIPTGIVVTCQTER 246
Query: 358 SQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLR 417
SQ +N+ AM +L+S++ + +I Q + AE DI+WG+QIR+YV HPY MVKD R
Sbjct: 247 SQIKNRERAMTLLRSKLYERKIEEQQKQLAEIRGDQMDIAWGSQIRSYVFHPYSMVKDHR 306
Query: 418 TNYEVSDPDSVLEGDLDGFILSYL 441
T E + +V++GD+D FI +YL
Sbjct: 307 TQVETGNVGAVMDGDIDEFIEAYL 330
>gi|313888002|ref|ZP_07821680.1| peptide chain release factor 2 [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312845957|gb|EFR33340.1| peptide chain release factor 2 [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 371
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 157/364 (43%), Positives = 222/364 (60%), Gaps = 15/364 (4%)
Query: 92 IAQSIQVIKKRLQWKNLNVR----------LNLLSAELNK----PNLWDDPVHAGRISRE 137
+ Q+I + K+RL+ L + L ELNK P WDD A ++ RE
Sbjct: 1 MEQNIYLDKERLENSKLTTKSLGESLEIDSLKEKVVELNKKQMEPGFWDDNESAQKVIRE 60
Query: 138 HGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALL 197
S K+ + + + D+I L E D + E + + + + E +L+ LL
Sbjct: 61 TNSYQRKIDQYDKLIDLITDAEDLIALMEIEEDYSSYSDFQELVDEIEKDTAEFKLNTLL 120
Query: 198 SGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRA 257
+GE D + + AGAGGTE+ DWASM+L+MY +A+ +G++V +D + + AGIK
Sbjct: 121 NGEYDSHDAILSIHAGAGGTEAQDWASMLLRMYTRYAENKGFKVETLDLLKEDEAGIKSV 180
Query: 258 TIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESD 317
T+K+ G+ A+GY K E GVHRLVRISPFDS KRRHTSF++V V P D T V+I + +
Sbjct: 181 TLKISGDNAYGYLKGEKGVHRLVRISPFDSNKRRHTSFSSVDVFPEI-DDDTEVEIKDEE 239
Query: 318 LRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQL 377
L+I+ +RS GAGGQH NTTDSAVRI HIPTGI CQNERSQ QN+ AM +L++++ L
Sbjct: 240 LKIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQCQNERSQIQNREKAMNMLKAKLVAL 299
Query: 378 EIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
+ + + + + I+WG+QIR+YV PY MVKD RTN +V D + V++GDLD FI
Sbjct: 300 AEEEKKEKIEDLQGNYSQIAWGSQIRSYVFQPYTMVKDHRTNVDVGDVEKVMDGDLDIFI 359
Query: 438 LSYL 441
+YL
Sbjct: 360 NAYL 363
>gi|357405364|ref|YP_004917288.1| peptide chain release factor 2 [Methylomicrobium alcaliphilum 20Z]
gi|351718029|emb|CCE23694.1| Peptide chain release factor 2 (RF-2) [Methylomicrobium
alcaliphilum 20Z]
Length = 385
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 150/335 (44%), Positives = 219/335 (65%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL + EL P +W++P A + +E L + + + L + +++ +A EE D
Sbjct: 53 RLVEVLKELEDPAIWNNPDQAQAMGKERVQLEKVVGTINELDSGLADAEELLAMAVEEGD 112
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
E L + RK E E + SGE+DP + ++++QAG+GGTE+ DWASM+ +MY
Sbjct: 113 EETVDTVANDLDQLERKVAELEFRRMFSGEMDPNNAFLDIQAGSGGTEAQDWASMIERMY 172
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
W + +G++ L++E PG++AGIK ATIK +GEYAFG+ + E GVHRLVR SPFDSG R
Sbjct: 173 LRWGEAKGFKTELIEESPGDVAGIKSATIKFEGEYAFGWLRTETGVHRLVRKSPFDSGNR 232
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSFA+V V P D + IN +DLRI+ +R+ GAGGQH N T+SAVRI H P+GI
Sbjct: 233 RHTSFASVFVSPEI-DDDIDIDINPADLRIDVYRASGAGGQHVNRTESAVRITHGPSGIV 291
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQ++RSQH+NK +AM L++++ ++EI ++++ S +DI WG+QIR+YVL
Sbjct: 292 VQCQSDRSQHKNKDTAMKQLKAKLYEMEIMKRSEQQQALEDSKSDIGWGSQIRSYVLDQS 351
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRTN E + +VL+G+LD FI + L + L
Sbjct: 352 R-IKDLRTNVETGNTQAVLDGELDQFIEASLKSGL 385
>gi|90417703|ref|ZP_01225615.1| peptide chain release factor 2 [Aurantimonas manganoxydans
SI85-9A1]
gi|90337375|gb|EAS51026.1| peptide chain release factor 2 [Aurantimonas manganoxydans
SI85-9A1]
Length = 321
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 148/307 (48%), Positives = 207/307 (67%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + V Q L ++I++I + EE D E+ E+ A+ ++ ++ +++++
Sbjct: 2 RERQFLDTAIGAVNRLNQSLQDNIELIAMGEEEKDAEIVKEAEAAIREIKSEADKRQIET 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+EV +GAGGTES DWA+M+ +MY WA+R ++V +++E GE AGIK
Sbjct: 62 LLSGEADSNDTYVEVHSGAGGTESQDWAAMLQRMYMRWAERAKFKVEVLEEHSGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
AT+ + G A+G+ K E GVHRLVRISP+DS RRHTSFA+V V P D S + +NE
Sbjct: 122 SATLLIKGHNAYGWMKTESGVHRLVRISPYDSQARRHTSFASVWVYPVV-DDSIDIDVNE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD+RI+ +R+ GAGGQH NTTDSAVRI H+ TGI CQ ERSQH+N+A+A +L++R+
Sbjct: 181 SDVRIDTYRASGAGGQHVNTTDSAVRITHLETGIVVQCQAERSQHKNRATAWNMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ R+ S TDI WG+QIR+YVL PY+MVKDLRT E + P VL+G LD
Sbjct: 241 EAELERRENAANAEAASKTDIGWGHQIRSYVLQPYQMVKDLRTGIESTSPQDVLDGGLDP 300
Query: 436 FILSYLS 442
F+ L+
Sbjct: 301 FMEGALA 307
>gi|385779195|ref|YP_005688360.1| peptide chain release factor 2 [Clostridium thermocellum DSM 1313]
gi|316940875|gb|ADU74909.1| Peptide chain release factor 2 [Clostridium thermocellum DSM 1313]
Length = 375
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 152/363 (41%), Positives = 236/363 (65%), Gaps = 4/363 (1%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
Q++ + K L ++ ++ L + ++P+ W+D ++ +I ++ SL K++
Sbjct: 14 FKQNLDEMGKSLDIASIGNQIEELEQKASEPDFWNDTENSQKILQKIKSLRSKVERYNKL 73
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
+ + I + +L EE D + E++E +++ + L+ LL+G+ D + + +
Sbjct: 74 VSQWEDLITLCELGIEEQDESVIPEAVEGFKAFKKEFEALRLETLLTGQYDKNNAILTLH 133
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AGAGGTE+ DW M+ +MY WA+++G+ V ++D + GE AGIK T +V GE A+G+ K
Sbjct: 134 AGAGGTEAQDWVQMLFRMYTRWAEKKGFTVKVLDYLDGEEAGIKSVTFQVIGENAYGFLK 193
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
+E GVHRLVRISPFD+ RRHTSFA++ V+P D V IN DLRI+ +RS GAGGQ
Sbjct: 194 SEKGVHRLVRISPFDASGRRHTSFASLDVMPELND-DIEVHINPDDLRIDTYRSSGAGGQ 252
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQ 391
H N T+SAVRI HIPTGI +CQ+ERSQ QNK +AM +L++++ +L+ R+ + E +
Sbjct: 253 HINKTESAVRITHIPTGIVVSCQSERSQFQNKDTAMKMLKAKLMELK-ERENKEKIEDLK 311
Query: 392 SLT-DISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKDEG 450
+ +I+WG+QIR+YV PY +VKD RTNYE + D+V++G+LDGFI SYLS S+ KD
Sbjct: 312 GIQLEIAWGSQIRSYVFCPYTLVKDHRTNYEEINVDAVMDGELDGFINSYLS-SVSKDNN 370
Query: 451 GQQ 453
++
Sbjct: 371 KEK 373
>gi|269103439|ref|ZP_06156136.1| peptide chain release factor 2 [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268163337|gb|EEZ41833.1| peptide chain release factor 2 [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 347
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 149/335 (44%), Positives = 218/335 (65%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++AEL +P++W++P A + +E SL ++ + +Q + + +++LA E D
Sbjct: 15 RLEEVNAELEQPDVWNEPERAQALGKERASLEAVVETIDQLDQGVDDVEGLLELAVEAED 74
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
E E L + K + E + SG+ D CY+++QAG+GGTE+ DW SM+L+MY
Sbjct: 75 QETFDEIEPELAELEAKLAKLEFRRMFSGDHDGSDCYLDLQAGSGGTEAQDWTSMMLRMY 134
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA +G++ +++ G++AG+K ATI++ GEYA+G+ + E GVHRLVR SPFDSG R
Sbjct: 135 LRWADAKGFKTEVIEVSEGDVAGLKSATIRISGEYAYGWLRTETGVHRLVRKSPFDSGGR 194
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSFA+ V P D + + IN SDLRI+ +R+ GAGGQH NTT+SAVRI HIPT
Sbjct: 195 RHTSFASAFVYPEV-DDNIDIDINPSDLRIDVYRASGAGGQHVNTTESAVRITHIPTNTV 253
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+NK AM L++++ +LE+ +Q + S +DI WG+QIR+YVL
Sbjct: 254 VQCQNDRSQHKNKDQAMKQLKAKLFELEMQKQNAEKQANEDSKSDIGWGSQIRSYVLDDS 313
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E + +VL+GDLD FI + L + L
Sbjct: 314 R-IKDLRTGVENRNTQAVLDGDLDRFIEASLKSGL 347
>gi|416051802|ref|ZP_11577825.1| peptide chain release factor 2 [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
gi|347992614|gb|EGY33999.1| peptide chain release factor 2 [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
Length = 335
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 149/335 (44%), Positives = 221/335 (65%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++AEL +P++W+D A + +E SL+ + +K +Q L + +++LA E D
Sbjct: 3 RLEEVNAELEQPDVWNDADKAQALGKERVSLVQVVNTIKNLKQGLEDVDGLLELAVEAED 62
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
+ E++ L + ++ ++ E + SGE D C CY+++QAG+GGTE+ DW M+L+MY
Sbjct: 63 EDTFNEAVAELDELEQQLEKLEFRRMFSGEHDACDCYVDLQAGSGGTEAQDWTEMLLRMY 122
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA+ +G++ LM+ G++AG+K ATIKV GEYAFG+ + E G+HRLVR SPFDS R
Sbjct: 123 LRWAESKGFKTELMEVSDGDVAGLKSATIKVSGEYAFGWLRTETGIHRLVRKSPFDSNNR 182
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSF+A V P ++IN +DLRI+ +R+ GAGGQH N T+SAVRI H+P+GI
Sbjct: 183 RHTSFSAAFVYPEID-DDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHMPSGIV 241
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+NK AM L++++ +LE+ ++ + +DI WG+QIR+YVL
Sbjct: 242 VQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDIGWGSQIRSYVLDDS 301
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E + +VL+GDLD FI + L A L
Sbjct: 302 R-IKDLRTGVENRNTQAVLDGDLDRFIEASLKAGL 335
>gi|319762196|ref|YP_004126133.1| peptide chain release factor 2 [Alicycliphilus denitrificans BC]
gi|330825983|ref|YP_004389286.1| hypothetical protein Alide2_3440 [Alicycliphilus denitrificans
K601]
gi|317116757|gb|ADU99245.1| Peptide chain release factor 2 [Alicycliphilus denitrificans BC]
gi|329311355|gb|AEB85770.1| hypothetical protein Alide2_3440 [Alicycliphilus denitrificans
K601]
Length = 367
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 156/358 (43%), Positives = 228/358 (63%), Gaps = 10/358 (2%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
+A Q +++ L + RL ++A L PN+W+DP A + +E L G + ++
Sbjct: 16 LANRTQELRRYLDYDAKYERLRTVNASLEDPNVWNDPKKAQELGKEKKLLDGVVLTLQKL 75
Query: 152 EQELLEHIDMIKLAREENDTELELESLEA----LLTMRRKSKEKELDALLSGELDPCSCY 207
EL ++ ++ +++REE D E L ++E LL + +E E + S E DP +CY
Sbjct: 76 TAELADNAELYEMSREEGD-EAGLLAIEGEAAKLLPL---IEELEFRRMFSKEADPLNCY 131
Query: 208 IEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAF 267
I++QAGAGGTE+ DWA M+L+ Y +A+R+G++ T+ +E PG++AGIK ATI ++GEYA+
Sbjct: 132 IDIQAGAGGTEACDWAGMLLRQYLKYAERKGFKATVDEETPGDVAGIKSATIHIEGEYAY 191
Query: 268 GYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGG 327
G + E GVHRLVR SPFDS RHTSFA++ V P D S + IN +D+R + +R+ G
Sbjct: 192 GLLRTETGVHRLVRKSPFDSSGGRHTSFASLFVYPEV-DDSIEININPADVRTDTYRASG 250
Query: 328 AGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNA 387
AGGQH N TDSAVR+ HIPTGI CQ+ RSQH N+ A L+S++ + E+ ++
Sbjct: 251 AGGQHINKTDSAVRLTHIPTGIVVQCQDGRSQHSNRDVAWQRLRSKLYEHEMQKRMVEQQ 310
Query: 388 EHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ + TD+ WG+QIR+YVL R +KDLRTN EVS VL+GDLD FI + L +
Sbjct: 311 KLEDTKTDVGWGHQIRSYVLDNSR-IKDLRTNVEVSATQKVLDGDLDVFIEASLKQGI 367
>gi|110802702|ref|YP_699445.1| peptide chain release factor 2 [Clostridium perfringens SM101]
gi|123145940|sp|Q0SR12.1|RF2_CLOPS RecName: Full=Peptide chain release factor 2; Short=RF-2
Length = 364
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 140/329 (42%), Positives = 216/329 (65%), Gaps = 2/329 (0%)
Query: 115 LSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELE 174
L ++ + WDD A +++E + K+ + K E ++ ++++K EEND E
Sbjct: 38 LELKMQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNL-NERIDDVEVLKELMEENDEETA 96
Query: 175 LESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWA 234
E + + + ++ +++ +LSGE D + + + G GG+++ DW M+L+MY W
Sbjct: 97 KEIISEVKALSKEIDTLKIETILSGEYDRNNAILTLHTGVGGSDANDWTEMLLRMYTRWC 156
Query: 235 QRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTS 294
+++GY + +D +PG+ AG+K T+KV GE+A+GY KAE G+HRLVRISPF++ +R TS
Sbjct: 157 EKKGYSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTS 216
Query: 295 FAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQ 354
FA+V V+P S ++IN DLRI+ +R+GGAGGQH N T+SAVRI HIPTGI CQ
Sbjct: 217 FASVEVLPELT-SDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQ 275
Query: 355 NERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVK 414
NERSQ N+ +AMG+L+S++ +L+ + + T L D+ WG+QIR+YV HPY MVK
Sbjct: 276 NERSQFSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVK 335
Query: 415 DLRTNYEVSDPDSVLEGDLDGFILSYLSA 443
D RTN E S+ + V+ GD+D FI++YL++
Sbjct: 336 DHRTNVETSNVNGVMGGDIDNFIIAYLNS 364
>gi|385801583|ref|YP_005837986.1| peptide chain release factor 2 [Gardnerella vaginalis HMP9231]
gi|415707102|ref|ZP_11461949.1| peptide chain release factor 2 [Gardnerella vaginalis 0288E]
gi|333393731|gb|AEF31649.1| peptide chain release factor 2 [Gardnerella vaginalis HMP9231]
gi|388054102|gb|EIK77047.1| peptide chain release factor 2 [Gardnerella vaginalis 0288E]
Length = 380
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 149/339 (43%), Positives = 220/339 (64%), Gaps = 2/339 (0%)
Query: 99 IKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEH 158
I K L +L V + L + ++P LWDD HA +++ + + ++K ++A EQ + +
Sbjct: 20 ISKALDVDSLKVTIADLEKQASEPGLWDDSEHAQQVTSKLSAAQSQLKRLQAVEQRIEDT 79
Query: 159 IDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTE 218
+I+L +EE D + E+ E L ++ + + E+ LL GE D + + +++GAGG +
Sbjct: 80 KTLIELGQEEEDADSMSEAQEELGSIAHELDDMEVQTLLDGEYDARAAVVTIRSGAGGVD 139
Query: 219 SMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHR 278
+ D+A M+L+MY WA+R GY+ +MD E AGIK AT +VD YA+G E G HR
Sbjct: 140 AADFAQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTHR 199
Query: 279 LVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDS 338
+VRISPFD+ RR T F+AV VIP +++ H+ I +SD+R++ F++ G GGQ NTT S
Sbjct: 200 MVRISPFDNQGRRQTGFSAVEVIPLV-EATDHIDIPDSDIRVDTFQASGPGGQGVNTTYS 258
Query: 339 AVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISW 398
AVRI H+PTG+ + Q+ERSQ QN+A+AM VLQSR+ L+ A +A E + SW
Sbjct: 259 AVRITHLPTGLVVSMQDERSQIQNRAAAMAVLQSRLLVLKHAEEAAKKKELAGDIK-ASW 317
Query: 399 GNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
G+Q+R+YVLHPY+MVKDLRT YE S +V +GD+DGFI
Sbjct: 318 GDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFI 356
>gi|227518951|ref|ZP_03949000.1| peptide chain release factor RF2 [Enterococcus faecalis TX0104]
gi|227553571|ref|ZP_03983620.1| peptide chain release factor RF2 [Enterococcus faecalis HH22]
gi|256961736|ref|ZP_05565907.1| peptide chain release factor 2 [Enterococcus faecalis Merz96]
gi|293383442|ref|ZP_06629355.1| peptide chain release factor 2 [Enterococcus faecalis R712]
gi|293388904|ref|ZP_06633389.1| peptide chain release factor 2 [Enterococcus faecalis S613]
gi|312907729|ref|ZP_07766720.1| peptide chain release factor 2 [Enterococcus faecalis DAPTO 512]
gi|312910347|ref|ZP_07769194.1| peptide chain release factor 2 [Enterococcus faecalis DAPTO 516]
gi|422714426|ref|ZP_16771152.1| peptide chain release factor 2 [Enterococcus faecalis TX0309A]
gi|422715683|ref|ZP_16772399.1| peptide chain release factor 2 [Enterococcus faecalis TX0309B]
gi|424676570|ref|ZP_18113441.1| peptide chain release factor 2 [Enterococcus faecalis ERV103]
gi|424681614|ref|ZP_18118401.1| peptide chain release factor 2 [Enterococcus faecalis ERV116]
gi|424683804|ref|ZP_18120554.1| peptide chain release factor 2 [Enterococcus faecalis ERV129]
gi|424686292|ref|ZP_18122960.1| peptide chain release factor 2 [Enterococcus faecalis ERV25]
gi|424690436|ref|ZP_18126971.1| peptide chain release factor 2 [Enterococcus faecalis ERV31]
gi|424695530|ref|ZP_18131913.1| peptide chain release factor 2 [Enterococcus faecalis ERV37]
gi|424696732|ref|ZP_18133073.1| peptide chain release factor 2 [Enterococcus faecalis ERV41]
gi|424699882|ref|ZP_18136093.1| peptide chain release factor 2 [Enterococcus faecalis ERV62]
gi|424703104|ref|ZP_18139238.1| peptide chain release factor 2 [Enterococcus faecalis ERV63]
gi|424707399|ref|ZP_18143383.1| peptide chain release factor 2 [Enterococcus faecalis ERV65]
gi|424716941|ref|ZP_18146239.1| peptide chain release factor 2 [Enterococcus faecalis ERV68]
gi|424720519|ref|ZP_18149620.1| peptide chain release factor 2 [Enterococcus faecalis ERV72]
gi|424724067|ref|ZP_18153016.1| peptide chain release factor 2 [Enterococcus faecalis ERV73]
gi|424733659|ref|ZP_18162214.1| peptide chain release factor 2 [Enterococcus faecalis ERV81]
gi|424744042|ref|ZP_18172347.1| peptide chain release factor 2 [Enterococcus faecalis ERV85]
gi|424750450|ref|ZP_18178514.1| peptide chain release factor 2 [Enterococcus faecalis ERV93]
gi|227073640|gb|EEI11603.1| peptide chain release factor RF2 [Enterococcus faecalis TX0104]
gi|227177301|gb|EEI58273.1| peptide chain release factor RF2 [Enterococcus faecalis HH22]
gi|256952232|gb|EEU68864.1| peptide chain release factor 2 [Enterococcus faecalis Merz96]
gi|291079233|gb|EFE16597.1| peptide chain release factor 2 [Enterococcus faecalis R712]
gi|291081685|gb|EFE18648.1| peptide chain release factor 2 [Enterococcus faecalis S613]
gi|310626757|gb|EFQ10040.1| peptide chain release factor 2 [Enterococcus faecalis DAPTO 512]
gi|311289620|gb|EFQ68176.1| peptide chain release factor 2 [Enterococcus faecalis DAPTO 516]
gi|315576028|gb|EFU88219.1| peptide chain release factor 2 [Enterococcus faecalis TX0309B]
gi|315580603|gb|EFU92794.1| peptide chain release factor 2 [Enterococcus faecalis TX0309A]
gi|402350713|gb|EJU85611.1| peptide chain release factor 2 [Enterococcus faecalis ERV116]
gi|402356582|gb|EJU91313.1| peptide chain release factor 2 [Enterococcus faecalis ERV103]
gi|402364169|gb|EJU98612.1| peptide chain release factor 2 [Enterococcus faecalis ERV129]
gi|402364279|gb|EJU98721.1| peptide chain release factor 2 [Enterococcus faecalis ERV31]
gi|402367826|gb|EJV02163.1| peptide chain release factor 2 [Enterococcus faecalis ERV25]
gi|402368225|gb|EJV02545.1| peptide chain release factor 2 [Enterococcus faecalis ERV37]
gi|402375381|gb|EJV09368.1| peptide chain release factor 2 [Enterococcus faecalis ERV62]
gi|402377061|gb|EJV10972.1| peptide chain release factor 2 [Enterococcus faecalis ERV41]
gi|402384997|gb|EJV18538.1| peptide chain release factor 2 [Enterococcus faecalis ERV65]
gi|402385109|gb|EJV18649.1| peptide chain release factor 2 [Enterococcus faecalis ERV63]
gi|402386289|gb|EJV19795.1| peptide chain release factor 2 [Enterococcus faecalis ERV68]
gi|402391272|gb|EJV24583.1| peptide chain release factor 2 [Enterococcus faecalis ERV81]
gi|402392990|gb|EJV26220.1| peptide chain release factor 2 [Enterococcus faecalis ERV72]
gi|402396048|gb|EJV29123.1| peptide chain release factor 2 [Enterococcus faecalis ERV73]
gi|402399465|gb|EJV32337.1| peptide chain release factor 2 [Enterococcus faecalis ERV85]
gi|402406749|gb|EJV39295.1| peptide chain release factor 2 [Enterococcus faecalis ERV93]
Length = 327
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 149/327 (45%), Positives = 208/327 (63%), Gaps = 1/327 (0%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
+ +P WD+ A ++ E SL K ++ +E+ E M +L +EE D E++ E
Sbjct: 1 MGEPGFWDNTETAQKLINETNSLKEKYQQFHQLSEEIDELTVMFELQQEEYDAEIQEELE 60
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
E + ++ + EL LL+ D + IE+ GAGGTES DW SM+L+MY WA+ G
Sbjct: 61 ERIHLLQERLTTYELSLLLNEPYDHNNALIELHPGAGGTESQDWGSMLLRMYTRWAESHG 120
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
++V +D G+ AGIK T+ + G A+GY K+E GVHRLVRISPFDS KRRHTSF +V
Sbjct: 121 FQVETLDYQAGDEAGIKSVTLLIKGYNAYGYLKSEKGVHRLVRISPFDSAKRRHTSFCSV 180
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
V+P D + + IN DL+I+ +R+ GAGGQH N T+SAVRI HIPTG Q +RS
Sbjct: 181 DVMPEL-DDTIEIAINPDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRS 239
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
Q +N+ AM +L++++ QLE+ ++AQ A +I WG+QIR+YV HPY MVKD RT
Sbjct: 240 QLKNREQAMSMLKAKLYQLEMEKKAQEAASLRGEQMEIGWGSQIRSYVFHPYSMVKDHRT 299
Query: 419 NYEVSDPDSVLEGDLDGFILSYLSASL 445
NYE + +V++GDLDGFI +YL L
Sbjct: 300 NYETGNVQAVMDGDLDGFIDAYLKQRL 326
>gi|227502940|ref|ZP_03932989.1| peptide chain release factor 2 [Corynebacterium accolens ATCC
49725]
gi|227076362|gb|EEI14325.1| peptide chain release factor 2 [Corynebacterium accolens ATCC
49725]
Length = 367
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 155/346 (44%), Positives = 224/346 (64%), Gaps = 11/346 (3%)
Query: 95 SIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQE 154
++ I+K + + L R+ L A+ P+LWDDP HA +++ E S K++++++
Sbjct: 15 TLTTIEKVMDPEALAARIRELEAQAGDPSLWDDPEHAQKVTSELSSAQAKVRKLESLRGR 74
Query: 155 LLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGA 214
L + M +LA EE + E L L + + E+ +LSGE DP I +++GA
Sbjct: 75 LDDMPVMYELAEEEGTVSVADEDLAELES---AIESLEVTTMLSGEYDPREAVINIRSGA 131
Query: 215 GGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEV 274
GG ++ DWA M+++MY WA + ++V + D E AGIK AT V GEY +G E
Sbjct: 132 GGVDAADWAEMLMRMYTRWAGKHDHKVDIYDISYAEEAGIKSATFVVHGEYMYGQLSVEQ 191
Query: 275 GVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHAN 334
G HRLVR+SPFD+ RR TSFA V V+P + + H+ + ++++R++ +RS G GGQ N
Sbjct: 192 GAHRLVRLSPFDNQGRRQTSFAEVEVLPVV-EQTDHIDVPDNEVRVDVYRSSGPGGQSVN 250
Query: 335 TTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ---AQMNAEHTQ 391
TTDSAVR+ HIPTGI TCQNE+SQ QNKASAM VLQ+++ LE RQ A+++A
Sbjct: 251 TTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKL--LERKRQEERAELDA--LG 306
Query: 392 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
+ + SWGNQ+R+YVLHPY+MVKDLRTN+E+ DP VL+GD+DGF+
Sbjct: 307 AGGNASWGNQMRSYVLHPYQMVKDLRTNFEMGDPSKVLDGDIDGFL 352
>gi|357024412|ref|ZP_09086564.1| peptide chain release factor 2 [Mesorhizobium amorphae CCNWGS0123]
gi|355543644|gb|EHH12768.1| peptide chain release factor 2 [Mesorhizobium amorphae CCNWGS0123]
Length = 322
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 160/317 (50%), Positives = 218/317 (68%), Gaps = 6/317 (1%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + VK Q L +++ +I+L EE D + E+ +L +M+ ++K ++++
Sbjct: 2 RERQGLEEGIAAVKGLTQALEDNVGLIELGEEEGDEGVIAEAEASLRSMQGEAKARQVET 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+E+ AGAGGTES DWASM+L+MY WA+RR ++V +++ GE AGIK
Sbjct: 62 LLSGEADANDTYLEIHAGAGGTESQDWASMLLRMYTRWAERRRFKVEVLEVHDGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
AT+ + G A+G+ K E GVHRLVRISP+DS RRHTSFA+V V P D + + ++E
Sbjct: 122 SATLLIKGHNAYGWMKTESGVHRLVRISPYDSNARRHTSFASVWVYPVI-DDTIEIDVSE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD+RI+ +RS G+GGQH NTTDSAVRI HI TGI CQ ERSQH+NKA A +L+SR+
Sbjct: 181 SDVRIDTYRSSGSGGQHVNTTDSAVRITHIATGIAVACQAERSQHKNKAKAWEMLRSRLY 240
Query: 376 QLEI-ARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLD 434
+ E+ R+A NA S +DI WG+QIR+YVL PY++VKDLRT E + P SVL+GDLD
Sbjct: 241 EEELKKREAVANATEA-SKSDIGWGHQIRSYVLQPYQLVKDLRTGVESTSPSSVLDGDLD 299
Query: 435 GFILSYLSASLDKDEGG 451
F+ + LS + EGG
Sbjct: 300 DFMEASLSQRI---EGG 313
>gi|168205594|ref|ZP_02631599.1| peptide chain release factor 2 [Clostridium perfringens E str.
JGS1987]
gi|169344216|ref|ZP_02865198.1| peptide chain release factor 2 [Clostridium perfringens C str.
JGS1495]
gi|422346837|ref|ZP_16427751.1| peptide chain release factor 2 [Clostridium perfringens WAL-14572]
gi|169297675|gb|EDS79775.1| peptide chain release factor 2 [Clostridium perfringens C str.
JGS1495]
gi|170662903|gb|EDT15586.1| peptide chain release factor 2 [Clostridium perfringens E str.
JGS1987]
gi|373225670|gb|EHP48001.1| peptide chain release factor 2 [Clostridium perfringens WAL-14572]
Length = 323
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 139/325 (42%), Positives = 214/325 (65%), Gaps = 2/325 (0%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
+ + WDD A +++E + K+ + K E ++ ++++K EEND E E +
Sbjct: 1 MQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNL-NERIDDVEVLKELMEENDEETAKEII 59
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
+ + ++ +++ +LSGE D + + G GG+++ DW M+L+MY W +++G
Sbjct: 60 SEVKALSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWCEKKG 119
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
Y + +D +PG+ AG+K T+KV GE+A+GY KAE G+HRLVRISPF++ +R TSFA+V
Sbjct: 120 YSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASV 179
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
V+P S ++IN DLRI+ +R+GGAGGQH N T+SAVRI HIPTGI CQNERS
Sbjct: 180 EVLPELT-SDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERS 238
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
Q N+ +AMG+L+S++ +L+ + + T L D+ WG+QIR+YV HPY MVKD RT
Sbjct: 239 QFSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKDHRT 298
Query: 419 NYEVSDPDSVLEGDLDGFILSYLSA 443
N E S+ + V++GD+D FI++YL++
Sbjct: 299 NVETSNVNGVMDGDIDNFIIAYLNS 323
>gi|306835540|ref|ZP_07468554.1| peptide chain release factor RF2 [Corynebacterium accolens ATCC
49726]
gi|304568597|gb|EFM44148.1| peptide chain release factor RF2 [Corynebacterium accolens ATCC
49726]
Length = 370
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 155/346 (44%), Positives = 224/346 (64%), Gaps = 11/346 (3%)
Query: 95 SIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQE 154
++ I+K + + L R+ L A+ P+LWDDP HA +++ E S K++++++
Sbjct: 18 TLTTIEKVMDPEALAARIRELEAQAGDPSLWDDPEHAQKVTSELSSAQAKVRKLESLRGR 77
Query: 155 LLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGA 214
L + M +LA EE + E L L + + E+ +LSGE DP I +++GA
Sbjct: 78 LDDMPVMYELAEEEGTVSVADEDLAELES---AIESLEVTTMLSGEYDPREAVINIRSGA 134
Query: 215 GGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEV 274
GG ++ DWA M+++MY WA + ++V + D E AGIK AT V GEY +G E
Sbjct: 135 GGVDAADWAEMLMRMYTRWAGKHDHKVDIYDISYAEEAGIKSATFVVHGEYMYGQLSVEQ 194
Query: 275 GVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHAN 334
G HRLVR+SPFD+ RR TSFA V V+P + + H+ + ++++R++ +RS G GGQ N
Sbjct: 195 GAHRLVRLSPFDNQGRRQTSFAEVEVLPVV-EQTDHIDVPDNEVRVDVYRSSGPGGQSVN 253
Query: 335 TTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ---AQMNAEHTQ 391
TTDSAVR+ HIPTGI TCQNE+SQ QNKASAM VLQ+++ LE RQ A+++A
Sbjct: 254 TTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKL--LERKRQEERAELDA--LG 309
Query: 392 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
+ + SWGNQ+R+YVLHPY+MVKDLRTN+E+ DP VL+GD+DGF+
Sbjct: 310 AGGNASWGNQMRSYVLHPYQMVKDLRTNFEMGDPSKVLDGDIDGFL 355
>gi|293375591|ref|ZP_06621865.1| peptide chain release factor 2 [Turicibacter sanguinis PC909]
gi|325836763|ref|ZP_08166230.1| peptide chain release factor 2 [Turicibacter sp. HGF1]
gi|292645808|gb|EFF63844.1| peptide chain release factor 2 [Turicibacter sanguinis PC909]
gi|325491141|gb|EGC93430.1| peptide chain release factor 2 [Turicibacter sp. HGF1]
Length = 365
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 155/361 (42%), Positives = 221/361 (61%), Gaps = 3/361 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
+S +++ I K L + + ++ WDD A + ++ K+
Sbjct: 7 RSEIKKMSERINQFKDSLNVEQKEAEIKEYDDQMQVAGFWDDQRKAQEVINAANAIKDKV 66
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
+ E E+ E +L EE D +L+ E + + + EL+ LLSG D +
Sbjct: 67 NTFYSLEGEVEELAVAFELILEEPDADLQAELESQIEEVSEHLNKFELEILLSGPYDANN 126
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
+E+ GAGGTES DWA M+ +MY +A+R+G+++ ++D + GE AGIK TIK+ G
Sbjct: 127 AILELHPGAGGTESQDWAEMLYRMYTRYAERKGFKIEVLDYLVGEEAGIKSVTIKIKGTN 186
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPN-SGDSSTHVQINESDLRIERFR 324
AFGY KAE GVHRLVRISPFDSG RRHTSF + V+P SGD ++I DL+I+ +R
Sbjct: 187 AFGYFKAERGVHRLVRISPFDSGGRRHTSFCSCDVMPEFSGD--IDIEIRAEDLKIDTYR 244
Query: 325 SGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQ 384
+ GAGGQH NTTDSAVRI HIPT TCQN+RSQ +N+ +AM +L+S++ Q ++ Q
Sbjct: 245 ASGAGGQHINTTDSAVRITHIPTNTIVTCQNQRSQIKNREAAMEMLKSKLYQRKLEEQEA 304
Query: 385 MNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSAS 444
A+ + +I WG+QIR+YV HPY +VKD RT+YEV + SV++GDLDGFI +YL S
Sbjct: 305 ELAKIRGEVKEIGWGSQIRSYVFHPYSLVKDHRTSYEVGNVQSVMDGDLDGFIDAYLRYS 364
Query: 445 L 445
+
Sbjct: 365 I 365
>gi|168213727|ref|ZP_02639352.1| peptide chain release factor 2 [Clostridium perfringens CPE str.
F4969]
gi|170714817|gb|EDT26999.1| peptide chain release factor 2 [Clostridium perfringens CPE str.
F4969]
Length = 323
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 139/325 (42%), Positives = 214/325 (65%), Gaps = 2/325 (0%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
+ + WDD A +++E + K+ + K E ++ ++++K EEND E E +
Sbjct: 1 MQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNL-NERIDDVEVLKELMEENDEETAKEII 59
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
+ + ++ +++ +LSGE D + + G GG+++ DW M+L+MY W +++G
Sbjct: 60 NEVKALSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWCEKKG 119
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
Y + +D +PG+ AG+K T+KV GE+A+GY KAE G+HRLVRISPF++ +R TSFA+V
Sbjct: 120 YSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASV 179
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
V+P S ++IN DLRI+ +R+GGAGGQH N T+SAVRI HIPTGI CQNERS
Sbjct: 180 EVLPELT-SDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERS 238
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
Q N+ +AMG+L+S++ +L+ + + T L D+ WG+QIR+YV HPY MVKD RT
Sbjct: 239 QFSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKDHRT 298
Query: 419 NYEVSDPDSVLEGDLDGFILSYLSA 443
N E S+ + V++GD+D FI++YL++
Sbjct: 299 NVETSNVNGVMDGDIDNFIIAYLNS 323
>gi|91775149|ref|YP_544905.1| peptide chain release factor 2 [Methylobacillus flagellatus KT]
gi|91709136|gb|ABE49064.1| bacterial peptide chain release factor 2 (bRF-2) [Methylobacillus
flagellatus KT]
Length = 354
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 147/328 (44%), Positives = 219/328 (66%), Gaps = 4/328 (1%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL +S L PN+W+D + ++ +E L + + E + + ++ ++AREEND
Sbjct: 22 RLEEVSQLLEDPNIWNDNERSQKLGKERRELEFVVNSLTEVENGVRDSRELFEMAREEND 81
Query: 171 TELELESLEA-LLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
+ L S++A + + E E + S +D +C++++QAG+GGTE+ DWASM+L+M
Sbjct: 82 DDT-LRSIDADTQALEKIVAEMEFRRMFSHPMDQNNCFLDIQAGSGGTEAQDWASMLLRM 140
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y + + +G++V +++E G++AGIK A++K+ G+YA+G+ + E GVHRLVR SPFDSG
Sbjct: 141 YLRYCENKGFKVEVLEESEGDVAGIKSASLKISGDYAYGFLRTESGVHRLVRKSPFDSGN 200
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RRHTSFA+V V P DS V+IN +DLRI+ +R+ GAGGQH N TDSAVRI H+PT
Sbjct: 201 RRHTSFASVFVYPEVDDSIV-VEINPADLRIDTYRASGAGGQHINKTDSAVRITHLPTNT 259
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHP 409
CQN+RSQH+NK AM +L++++ LE+ ++ + + TDI WG+QIR+YVL
Sbjct: 260 VVQCQNDRSQHRNKDEAMNMLKAQLYALELRKRNEEKQAMEDAKTDIGWGHQIRSYVLDQ 319
Query: 410 YRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
R +KDLRTN EV + VL+GDLD FI
Sbjct: 320 SR-IKDLRTNVEVGNTQGVLDGDLDPFI 346
>gi|170743911|ref|YP_001772566.1| peptide chain release factor 2 [Methylobacterium sp. 4-46]
gi|168198185|gb|ACA20132.1| peptide chain release factor 2 [Methylobacterium sp. 4-46]
Length = 321
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 151/308 (49%), Positives = 210/308 (68%), Gaps = 3/308 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
R+ L + ++ EQ L + +I+L E D E E + ++ ++ ++++
Sbjct: 2 RDRNDLEEAVASIRRLEQGLEDAATLIELGEMEGDEASIREGEEQIRAVQAEAARRQIET 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LL+GE D Y+EV AGAGGTES DWA+M+ +MY WA+RR Y+V +++ GE AGIK
Sbjct: 62 LLAGEADGNDTYLEVHAGAGGTESQDWANMLQRMYARWAERRKYKVDIVEWSEGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
AT+ + G A+G+ K E GVHRLVRISP+DS RRHTSFA+V V P D T +++ E
Sbjct: 122 GATLLIKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFASVWVYPVVDDRIT-IEVKE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD RI+ +RS GAGGQH NTTDSAVRI H+PTGI CQ ERSQH+N+A+A +L++R+
Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVVACQQERSQHKNRATAWNMLRARLY 240
Query: 376 QLEI-ARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLD 434
+LE+ R+ + NAE S TDI WG+QIR+YVL PY++VKDLRT + + PD VL+GD+D
Sbjct: 241 ELELKKREEKANAE-AASKTDIGWGHQIRSYVLQPYQLVKDLRTGTQSTSPDDVLDGDID 299
Query: 435 GFILSYLS 442
FI + L+
Sbjct: 300 PFIEASLA 307
>gi|282848898|ref|ZP_06258288.1| peptide chain release factor 2 [Veillonella parvula ATCC 17745]
gi|282581403|gb|EFB86796.1| peptide chain release factor 2 [Veillonella parvula ATCC 17745]
Length = 330
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 142/323 (43%), Positives = 213/323 (65%), Gaps = 1/323 (0%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
++ P WD+P A IS+E L ++ K ++ + M+++A +E+D +E E
Sbjct: 1 MSDPTFWDNPDKAREISQEATQLKNAVESYKQLVSDIEDANMMLEMAIDEDDLSMESEIK 60
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
E + + +++E+ LLSGE D + + AGAGGTE+ DW SM+++MY WA++ G
Sbjct: 61 EYVKQIEETLEKQEVLLLLSGEYDANNAILTFHAGAGGTEAQDWCSMLIRMYLRWAEKSG 120
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
+ + LMDE PG+ AGIK AT V GE AFGY K+E GVHRLVRISPFD+ RRHTSFAAV
Sbjct: 121 FSIELMDEQPGDEAGIKSATFLVKGENAFGYLKSEKGVHRLVRISPFDAAARRHTSFAAV 180
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
V+P D + + I+ D++++ +R+ GAGGQH N TDSAVR+ H PTGI CQ +RS
Sbjct: 181 DVMPEI-DDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGIVVQCQTQRS 239
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
Q QN+ A+ +L++++ +LE+ +QA++ + + I WG+QIR+YV HPY +VKD RT
Sbjct: 240 QMQNREQALRLLRAKLFELELEKQAELKEQIGGTYQAIEWGSQIRSYVFHPYNLVKDHRT 299
Query: 419 NYEVSDPDSVLEGDLDGFILSYL 441
+ E + +V++G+LD F+ +L
Sbjct: 300 SVETGNVQAVMDGNLDPFVEGFL 322
>gi|88812905|ref|ZP_01128149.1| hypothetical protein NB231_00155 [Nitrococcus mobilis Nb-231]
gi|88789827|gb|EAR20950.1| hypothetical protein NB231_00155 [Nitrococcus mobilis Nb-231]
Length = 325
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 149/328 (45%), Positives = 223/328 (67%), Gaps = 4/328 (1%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
+ +P++W+DP A ++RE L + ++ + L + ++++LAR END E L L
Sbjct: 1 MEQPDVWNDPERAHELNRERVRLQTLVSSLERLTRGLADTAELLELARTEND-EATLAEL 59
Query: 179 EALLTMRRKSKEK-ELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRR 237
+A +T + E E + SGE+D + ++++QAG+GGTE+ DWA+M+L+MY W +++
Sbjct: 60 DADVTGYQSEIEALEFRRMFSGEMDERNAFLDIQAGSGGTEAQDWANMLLRMYLRWVEQK 119
Query: 238 GYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAA 297
+ +++ GE+AGIK AT++++G+YAFG+ + E GVHRLVR SPFDSG RRHTSFAA
Sbjct: 120 RFTAEIIEFSEGEVAGIKSATLRIEGDYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFAA 179
Query: 298 VAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNER 357
V V P D + V+IN +DLRI+ +R+ GAGGQH N T+SAVRI H+PTGI CQN+R
Sbjct: 180 VFVSPEL-DDAVEVEINPADLRIDVYRASGAGGQHVNRTESAVRITHMPTGIVTQCQNDR 238
Query: 358 SQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLR 417
SQH+NKA+AM L++++ +LE+ ++ + + +S DI WG+QIR+YVL R +KDLR
Sbjct: 239 SQHKNKATAMKQLRAKLYELEMHKRREQADQVEESKADIGWGSQIRSYVLDQSR-IKDLR 297
Query: 418 TNYEVSDPDSVLEGDLDGFILSYLSASL 445
T E+ +VL G LD FI + L A L
Sbjct: 298 TGVEIGHTQAVLNGALDPFIEASLKAGL 325
>gi|319943696|ref|ZP_08017977.1| peptide chain release factor RF2 [Lautropia mirabilis ATCC 51599]
gi|319742929|gb|EFV95335.1| peptide chain release factor RF2 [Lautropia mirabilis ATCC 51599]
Length = 359
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 153/335 (45%), Positives = 218/335 (65%), Gaps = 10/335 (2%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL +++ L P++W+D A + +E +L + ++ L + D+ ++A END
Sbjct: 27 RLTEVNSALEAPDIWNDAAAALELGKEKRALDNVVGTIEQLTGSLSDTRDLYEMAVAEND 86
Query: 171 T----ELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMV 226
ELE ESL + + + E + S DP C++E+QAGAGGTE+ DWA+M+
Sbjct: 87 DATLEELERESL----GIEKGVEGLEFRRMFSNPADPGPCFLEIQAGAGGTEACDWAAML 142
Query: 227 LQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFD 286
L+ Y + +RRG+ TL++E G++AGIK AT+KV+GEYA+GY + E G+HRLVR SPFD
Sbjct: 143 LRQYLRYCERRGFTTTLLEESEGDVAGIKGATLKVEGEYAYGYLRTETGIHRLVRKSPFD 202
Query: 287 SGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIP 346
S RHTSFA+V V P D S V IN +DLRI+ +R+ GAGGQH N T+SAVRI H+P
Sbjct: 203 SSGGRHTSFASVYVYPEV-DDSIEVDINPADLRIDVYRASGAGGQHVNKTESAVRITHLP 261
Query: 347 TGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYV 406
T CQN+RSQH+N+ AM +L++R+ +LE+ ++ + S TDI WG+QIR+YV
Sbjct: 262 TNTVVQCQNDRSQHRNRDEAMKMLRARLFELELRKRQAEQDKVEASKTDIGWGHQIRSYV 321
Query: 407 LHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
L R +KDLRTN+E S+ +VL+GDLD FI L
Sbjct: 322 LDQSR-IKDLRTNFETSNTKAVLDGDLDDFIAESL 355
>gi|255926563|gb|ABG86573.2| peptide chain release factor 2 [Clostridium perfringens SM101]
Length = 364
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 140/329 (42%), Positives = 216/329 (65%), Gaps = 2/329 (0%)
Query: 115 LSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELE 174
L ++ + WDD A +++E + K+ + K E ++ ++++K EEND E
Sbjct: 38 LELKMQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNL-NERIDDVEVLKELMEENDEETA 96
Query: 175 LESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWA 234
E + + + ++ +++ +LSGE D + + + G GG+++ DW M+L+MY W
Sbjct: 97 KEIISEVKALSKEIDTLKIETILSGEYDRNNAILTLHTGVGGSDANDWTEMLLRMYTRWC 156
Query: 235 QRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTS 294
+++GY + +D +PG+ AG+K T+KV GE+A+GY KAE G+HRLVRISPF++ +R TS
Sbjct: 157 EKKGYSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTS 216
Query: 295 FAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQ 354
FA+V V+P S ++IN DLRI+ +R+GGAGGQH N T+SAVRI HIPTGI CQ
Sbjct: 217 FASVEVLPELT-SDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQ 275
Query: 355 NERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVK 414
NERSQ N+ +AMG+L+S++ +L+ + + T L D+ WG+QIR+YV HPY MVK
Sbjct: 276 NERSQFSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVK 335
Query: 415 DLRTNYEVSDPDSVLEGDLDGFILSYLSA 443
D RTN E S+ + V+ GD+D FI++YL++
Sbjct: 336 DHRTNVETSNVNGVMGGDIDNFIIAYLNS 364
>gi|427404010|ref|ZP_18894892.1| peptide chain release factor 2 [Massilia timonae CCUG 45783]
gi|425717249|gb|EKU80214.1| peptide chain release factor 2 [Massilia timonae CCUG 45783]
Length = 349
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 146/336 (43%), Positives = 224/336 (66%), Gaps = 4/336 (1%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
+L ++ E+ P++W+DP A + +E +L G + ++ + +L + D+ +AREE D
Sbjct: 17 KLEQVNQEMEDPSIWNDPKKAQEMGKEKKALEGVVLVLEKAKGDLADARDLFDMAREEGD 76
Query: 171 TELELESLEALLTMRRKSKEK-ELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
+ +E++ L +K E E + S +D +C+I++QAGAGGTE+ DWASM+L+
Sbjct: 77 DDT-IEAVSGDLDEVQKVIEAMEFRRMFSNPMDHANCFIDIQAGAGGTEAQDWASMLLRQ 135
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y + +R+G++ ++++ GE+AGIK ATIKVDGEYA+G+ + E GVHRLVR SPFDS
Sbjct: 136 YLRYCERKGFKAEILEQSEGEVAGIKTATIKVDGEYAYGHLRTETGVHRLVRKSPFDSAN 195
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RHTSF ++ V P D S ++IN +D+RI+ +R+ GAGGQH N TDSAVR+ H P+GI
Sbjct: 196 GRHTSFTSLFVYPEV-DDSIEIEINPADVRIDTYRASGAGGQHINKTDSAVRLTHAPSGI 254
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHP 409
CQN+RSQH+NKA A +L++++ +LE+ + + S TD+ WG+QIR+YVL
Sbjct: 255 VVQCQNDRSQHRNKAEAWDMLRAKLYELELRNRMSEQQKLEDSKTDVGWGHQIRSYVLDQ 314
Query: 410 YRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT +E + +VL+GDLD FI + L ++
Sbjct: 315 SR-IKDLRTGFETGNTKNVLDGDLDDFISASLKQNV 349
>gi|83593375|ref|YP_427127.1| peptide chain release factor 2 [Rhodospirillum rubrum ATCC 11170]
gi|386350113|ref|YP_006048361.1| peptide chain release factor 2 [Rhodospirillum rubrum F11]
gi|83576289|gb|ABC22840.1| bacterial peptide chain release factor 2 (bRF-2) [Rhodospirillum
rubrum ATCC 11170]
gi|346718549|gb|AEO48564.1| peptide chain release factor 2 [Rhodospirillum rubrum F11]
Length = 322
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 149/310 (48%), Positives = 206/310 (66%), Gaps = 1/310 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + +A E+E+ + +I+L E+D E E L + +K++++EL++
Sbjct: 2 RERTHLEQSVAGYRALEREVDDAATLIELGDAEDDAESIAEGERMLHSAAQKARKQELES 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+EV AGAGGTE+ DWA ++L+MY WA+ G++V ++E GE AGIK
Sbjct: 62 LLSGEADHNDAYLEVHAGAGGTEAQDWALILLRMYTRWAEAHGHKVEFLEESAGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATIK+ G A+G+ K E GVHRLVRISPFDS RRHTSF+++ V P D + + I E
Sbjct: 122 SATIKIVGHNAYGWLKTESGVHRLVRISPFDSSARRHTSFSSIWVYPVV-DDTIEIDIEE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
D RI+ +R+ GAGGQH N T+SAVRI HIPTGI CQ+ERSQHQNK +L++R+
Sbjct: 181 KDCRIDTYRASGAGGQHVNRTESAVRITHIPTGIVVQCQSERSQHQNKDYCWSMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ ++ + + TDI WG+QIR+YVL PY+M+KD RTN E SD VL GDLD
Sbjct: 241 EHELQKREEKTKALEDTKTDIGWGHQIRSYVLQPYQMIKDTRTNVETSDTQGVLNGDLDQ 300
Query: 436 FILSYLSASL 445
F+ + L+A +
Sbjct: 301 FMAASLAARI 310
>gi|407009068|gb|EKE24289.1| hypothetical protein ACD_6C00170G0001 [uncultured bacterium]
Length = 349
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 152/336 (45%), Positives = 219/336 (65%), Gaps = 4/336 (1%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL + EL P +W+D A +++E G L + + +L + ++ LA E +D
Sbjct: 17 RLEEVLRELEDPTIWNDQSRAQAMAKEKGELENVLNVLDRLSTQLEDAQALLDLAVEADD 76
Query: 171 TELELESLEALLTMRRKSKEK-ELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
L LE ++A L+ + K E + + +DP CY+E+QAG+GGTE+ DWASM+L+M
Sbjct: 77 ESL-LEDVQAELSTAEEELAKLEFRRMFNNPMDPNPCYLEIQAGSGGTEAQDWASMLLRM 135
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y W +R G++ +M+E G++AGIK ATI+V+GEYA+G+ + E GVHRLVR SPFDSG
Sbjct: 136 YLRWIERHGFKAEVMEESDGDVAGIKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGN 195
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RRHTSF+AV V P D + ++IN SD+R + +R+ GAGGQH N TDSAVR+ H PTGI
Sbjct: 196 RRHTSFSAVFVSPEV-DDNIEIEINPSDVRTDTYRASGAGGQHINKTDSAVRLTHAPTGI 254
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHP 409
CQN+RSQH N+ A L++++ +LE++++ + S +DI WG+QIR+YVL
Sbjct: 255 VVACQNQRSQHANRDHAWKQLRAKLYELEMSKRNEAAQALEDSKSDIGWGSQIRSYVLDD 314
Query: 410 YRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E S+ +VL+GDLD FI + L L
Sbjct: 315 SR-IKDLRTGVENSNTGAVLDGDLDKFIEASLKQGL 349
>gi|319408605|emb|CBI82260.1| peptide chain release factor RF-2 [Bartonella schoenbuchensis R1]
Length = 323
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 154/313 (49%), Positives = 214/313 (68%), Gaps = 3/313 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + ++ F Q L E I++I + EE+D E+ ++ + ++ + ++++D
Sbjct: 3 RERQCLEDSINGIRLFTQTLEECIELIAMGEEESDEEIITDAENTIRKLKSEIDKRQIDL 62
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+E+ AGAGGTES DWASM+L+MY WA++ +V +++ GE AGIK
Sbjct: 63 LLSGEADSNDTYLEIHAGAGGTESQDWASMLLRMYIRWAEQHKMKVEVLEIHDGEEAGIK 122
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI V G A+G K E GVHRLVRISPFDS RRHTSFA+V V + D + + I+E
Sbjct: 123 SATILVKGHNAYGMLKTESGVHRLVRISPFDSNARRHTSFASVWVY-SVVDDNIEIDISE 181
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD+RI+ +R+ GAGGQH NTTDSAVRI HI TGI CQ ERSQH+N+A+A +L++R+
Sbjct: 182 SDIRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQVERSQHKNRATAWSMLRARLY 241
Query: 376 QLEI-ARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLD 434
+ E+ R+A+ NA S T+I WG+QIR+YVL PY++VKDLRT E +DP +VL G+LD
Sbjct: 242 EEELKKREAETNAIEA-SKTEIGWGHQIRSYVLQPYQLVKDLRTGVENTDPQTVLNGNLD 300
Query: 435 GFILSYLSASLDK 447
FI + L+ + K
Sbjct: 301 AFIEAALAQRVYK 313
>gi|332983173|ref|YP_004464614.1| peptide chain release factor 2 (bRF-2) [Mahella australiensis 50-1
BON]
gi|332700851|gb|AEE97792.1| bacterial peptide chain release factor 2 (bRF-2) [Mahella
australiensis 50-1 BON]
Length = 353
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 144/327 (44%), Positives = 214/327 (65%), Gaps = 1/327 (0%)
Query: 115 LSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELE 174
L ++ P+ W D + ++++ +L K++ ++A EQ+ + + L REE+D +
Sbjct: 19 LEKQMADPSFWSDMERSQKVNQRIKALKDKLQNLRAVEQKWEDLRTLADLGREEDDASIV 78
Query: 175 LESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWA 234
E L ++R++ + ++ LLSG D + + + AGAGGTE+ DW M+ +MY WA
Sbjct: 79 GEVAAELASLRKEVERLRIETLLSGPYDRNNAIVTLHAGAGGTEAQDWVQMLYRMYTRWA 138
Query: 235 QRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTS 294
+ +GY+V ++D + G+ AGIK T V+GE A+GY KAE GVHRLVRISPFD+ RRHTS
Sbjct: 139 EDKGYKVEVLDLLEGDEAGIKSVTFLVEGENAYGYLKAEKGVHRLVRISPFDAAGRRHTS 198
Query: 295 FAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQ 354
FA+V V+P D V+IN DL+I+ +RS GAGGQH N T+SA+RI HIPTGI CQ
Sbjct: 199 FASVDVMPELDDDEG-VEINPEDLKIDTYRSSGAGGQHVNKTESAIRITHIPTGIVVQCQ 257
Query: 355 NERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVK 414
NERSQH NK +AM +L++++ +L+ + ++ L I WG+QIR+Y+ PY MVK
Sbjct: 258 NERSQHSNKETAMKMLKAKLLELKEQEEQAKISDIKGELKRIEWGSQIRSYIFQPYTMVK 317
Query: 415 DLRTNYEVSDPDSVLEGDLDGFILSYL 441
D RTN E+ + ++V++GD+D FI YL
Sbjct: 318 DHRTNAEIGNVNAVMDGDIDLFISEYL 344
>gi|255091190|ref|ZP_05320668.1| peptide chain release factor 2 [Clostridium difficile CIP 107932]
gi|255099304|ref|ZP_05328281.1| peptide chain release factor 2 [Clostridium difficile QCD-63q42]
gi|255305089|ref|ZP_05349261.1| peptide chain release factor 2 [Clostridium difficile ATCC 43255]
gi|255312847|ref|ZP_05354430.1| peptide chain release factor 2 [Clostridium difficile QCD-76w55]
gi|255515606|ref|ZP_05383282.1| peptide chain release factor 2 [Clostridium difficile QCD-97b34]
gi|255648700|ref|ZP_05395602.1| peptide chain release factor 2 [Clostridium difficile QCD-37x79]
gi|306518820|ref|ZP_07405167.1| peptide chain release factor 2 [Clostridium difficile QCD-32g58]
Length = 339
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 149/334 (44%), Positives = 223/334 (66%), Gaps = 5/334 (1%)
Query: 109 NVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHID-MIKLARE 167
N+++N ++N+ + W+D A R+ +E+ SL ++E ++ + LLE I+ +I++ E
Sbjct: 4 NIQIN--EEKMNQQDFWNDNEVAQRVLQENKSLKETLEEYESL-KSLLEDIEVLIEIGLE 60
Query: 168 ENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVL 227
E+D +E + +++ +M K E ++ LL+GE D + + + AG GG ++ DWA M+L
Sbjct: 61 EDDDSVERDIEKSIESMEEKLSEMKIKTLLNGEYDKNNAILSINAGTGGLDAQDWAQMLL 120
Query: 228 QMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDS 287
+MY W++ +GY+V L+D + AGIK ATI V+G A+GY K+E GVHRLVRISPFD
Sbjct: 121 RMYIRWSESKGYKVKLLDIISDPEAGIKTATILVEGTNAYGYLKSEKGVHRLVRISPFDP 180
Query: 288 GKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPT 347
+RHTSFA++ V P D + V+IN SDL+I+ +R+ GAGGQH NTTDSAVRI HIPT
Sbjct: 181 SGKRHTSFASIDVTPEL-DENIEVEINPSDLKIDTYRASGAGGQHVNTTDSAVRITHIPT 239
Query: 348 GITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVL 407
G+ CQNERSQH NK AM +L +++ +L+ Q + + + I+WG+QIR+YV
Sbjct: 240 GVVVQCQNERSQHLNKDRAMRLLMAKLIELKELEQKEKIEDIQGKYSQITWGSQIRSYVF 299
Query: 408 HPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
PY++VKD RTN E + DSV+ G++D FI YL
Sbjct: 300 QPYKLVKDHRTNAEFGNVDSVMNGNIDLFINEYL 333
>gi|334139368|ref|ZP_08512760.1| peptide chain release factor 2 [Paenibacillus sp. HGF7]
gi|333602181|gb|EGL13612.1| peptide chain release factor 2 [Paenibacillus sp. HGF7]
Length = 333
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 149/328 (45%), Positives = 211/328 (64%), Gaps = 1/328 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
P+ WDD A +I E ++ + + +A E + M +LA EEND ++ E + L
Sbjct: 6 PDFWDDNEKAQKIIGELNAIKSVVDQFQALNNEYEDLDVMAQLADEENDEDMAAELADGL 65
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
+ RK ++ +L LL+ D + +E+ GAGGTES DWA M+L+MY+ WA++R ++V
Sbjct: 66 KGVLRKLEDFQLQLLLNQPYDRLNAILELHPGAGGTESQDWAEMLLRMYRRWAEKRDFKV 125
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
++D +PG+ AG+K T+ + G A+GY KAE GVHRLVRISPFD+ RRHTSF + V+
Sbjct: 126 EVLDYLPGDEAGVKSVTLLIKGYNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSCDVV 185
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D V I DL+I+ +R+ GAGGQH NTTDSAVRI H+PTG+ TCQ ERSQ +
Sbjct: 186 PEIED-DVEVDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTGVVVTCQTERSQIK 244
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
N+ AM L+S++ + +I Q + AE +DI+WG+QIR+YV HPY MVKD RT E
Sbjct: 245 NRERAMKHLRSKLYEKKIEEQEKHLAEIRGEQSDIAWGSQIRSYVFHPYSMVKDHRTTEE 304
Query: 422 VSDPDSVLEGDLDGFILSYLSASLDKDE 449
+ +V++GDLD FI +YL + K E
Sbjct: 305 TGNVGAVMDGDLDPFIDAYLRLQIQKKE 332
>gi|330817652|ref|YP_004361357.1| peptide chain release factor 2 [Burkholderia gladioli BSR3]
gi|327370045|gb|AEA61401.1| peptide chain release factor 2 [Burkholderia gladioli BSR3]
Length = 299
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 143/293 (48%), Positives = 203/293 (69%), Gaps = 2/293 (0%)
Query: 145 MKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPC 204
M + + +L + D+ +LAREEND + L S + ++ E E + S DP
Sbjct: 1 MTTLTTLDGDLRDAQDLFELAREENDEDTLLASEGEAAELEKRVAEIEFRRMFSNPADPN 60
Query: 205 SCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGE 264
+C+I++QAGAGGTE+ DWASM+L+ Y + +R+G++ +++E G++AGIK ATIKV G+
Sbjct: 61 NCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKTEVLEESDGDVAGIKNATIKVTGD 120
Query: 265 YAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFR 324
YA+G+ + E G+HRLVR SPFDS RHTSF++V V P D S V++N +DLRI+ +R
Sbjct: 121 YAYGFLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEI-DDSIEVEVNPADLRIDTYR 179
Query: 325 SGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQ 384
+ GAGGQH N TDSAVRI H+PTGI CQN+RSQH+N+A AM +L+SR+ + E+ ++
Sbjct: 180 ASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEAEMRKRQA 239
Query: 385 MNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
+ S TD+ WG+QIR+YVL R VKDLRTN E+S+ +VL+GDLD FI
Sbjct: 240 EQDKLESSKTDVGWGHQIRSYVLDQSR-VKDLRTNVEMSNTRAVLDGDLDDFI 291
>gi|254973803|ref|ZP_05270275.1| peptide chain release factor 2 [Clostridium difficile QCD-66c26]
gi|260681922|ref|YP_003213207.1| peptide chain release factor 2 [Clostridium difficile CD196]
gi|260685520|ref|YP_003216653.1| peptide chain release factor 2 [Clostridium difficile R20291]
gi|260208085|emb|CBA60326.1| peptide chain release factor 2 [Clostridium difficile CD196]
gi|260211536|emb|CBE01711.1| peptide chain release factor 2 [Clostridium difficile R20291]
Length = 338
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 149/334 (44%), Positives = 223/334 (66%), Gaps = 5/334 (1%)
Query: 109 NVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHID-MIKLARE 167
N+++N ++N+ + W+D A R+ +E+ SL ++E ++ + LLE I+ +I++ E
Sbjct: 3 NIQIN--EEKMNQQDFWNDNEVAQRVLQENKSLKETLEEYESL-KSLLEDIEVLIEIGLE 59
Query: 168 ENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVL 227
E+D +E + +++ +M K E ++ LL+GE D + + + AG GG ++ DWA M+L
Sbjct: 60 EDDDSVERDIEKSIESMEEKLSEMKIKTLLNGEYDKNNAILSINAGTGGLDAQDWAQMLL 119
Query: 228 QMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDS 287
+MY W++ +GY+V L+D + AGIK ATI V+G A+GY K+E GVHRLVRISPFD
Sbjct: 120 RMYIRWSESKGYKVKLLDIISDPEAGIKTATILVEGTNAYGYLKSEKGVHRLVRISPFDP 179
Query: 288 GKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPT 347
+RHTSFA++ V P D + V+IN SDL+I+ +R+ GAGGQH NTTDSAVRI HIPT
Sbjct: 180 SGKRHTSFASIDVTPEL-DENIEVEINPSDLKIDTYRASGAGGQHVNTTDSAVRITHIPT 238
Query: 348 GITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVL 407
G+ CQNERSQH NK AM +L +++ +L+ Q + + + I+WG+QIR+YV
Sbjct: 239 GVVVQCQNERSQHLNKDRAMRLLMAKLIELKELEQKEKIEDIQGKYSQITWGSQIRSYVF 298
Query: 408 HPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
PY++VKD RTN E + DSV+ G++D FI YL
Sbjct: 299 QPYKLVKDHRTNAEFGNVDSVMNGNIDLFINEYL 332
>gi|402566096|ref|YP_006615441.1| peptide chain release factor 2 [Burkholderia cepacia GG4]
gi|402247293|gb|AFQ47747.1| peptide chain release factor 2 [Burkholderia cepacia GG4]
Length = 298
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 145/298 (48%), Positives = 208/298 (69%), Gaps = 6/298 (2%)
Query: 148 VKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCY 207
+ A + +L + +D+ +LAREE D + + S + + + + E + S DP +C+
Sbjct: 3 LTALDSDLRDALDLFELAREEGDEDTLVASEDDAAKLEARVGDIEFRRMFSNPADPNNCF 62
Query: 208 IEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAF 267
I++QAGAGGTE+ DWASM+L+ Y + +R+G++ +++E G++AGIK AT+KV GEYA+
Sbjct: 63 IDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATVKVSGEYAY 122
Query: 268 GYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGG 327
G+ + E G+HRLVR SPFDS RHTSF++V V P D S V+IN +DLRI+ +R+ G
Sbjct: 123 GFLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEI-DDSIEVEINPADLRIDTYRASG 181
Query: 328 AGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNA 387
AGGQH N TDSAVRI H+PTGI CQN+RSQH+N+A AM +L+SR+ ++E+ ++
Sbjct: 182 AGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEVEMRKRQAEQD 241
Query: 388 EHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ S TD+ WG+QIR+YVL R VKDLRTN E+S+ +VL+GDLD FI SASL
Sbjct: 242 KLESSKTDVGWGHQIRSYVLDQSR-VKDLRTNVEMSNTRAVLDGDLDDFI----SASL 294
>gi|319898909|ref|YP_004159002.1| peptide chain release factor RF-2 [Bartonella clarridgeiae 73]
gi|319402873|emb|CBI76424.1| peptide chain release factor RF-2 [Bartonella clarridgeiae 73]
Length = 333
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 147/319 (46%), Positives = 214/319 (67%), Gaps = 1/319 (0%)
Query: 124 LWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLT 183
LW++ A + RE +L M + F Q L E I++I + EEND + E+ +L
Sbjct: 2 LWNNAQKAQDVMRERQNLENSMNSTQLFTQTLEECIELIAMGEEENDMGIIAEAENTILQ 61
Query: 184 MRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTL 243
++++ ++ ++ LLSGE D Y+E+ AGAGG ES DWASM+L+MY WA++ +V +
Sbjct: 62 LKKEIDKRRIEMLLSGEADSNDTYLEIHAGAGGIESQDWASMLLRMYSRWAEQNKMKVEV 121
Query: 244 MDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPN 303
++ GE AGIK AT+ + G A+G K E GVHRLVRISP+DS RRHTSFA++ + P
Sbjct: 122 LETHDGEEAGIKSATLLIKGHNAYGLLKTESGVHRLVRISPYDSNARRHTSFASIWIYP- 180
Query: 304 SGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNK 363
+ + V ++++D+RI+ +R+ GAGGQH NTTDSAVRI HI TGI CQ ERSQH+N+
Sbjct: 181 VVNENIEVDLSDADVRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNR 240
Query: 364 ASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVS 423
A+A +L++R+ + E+ ++ + S T+I WG+QIR+YVL PY++VKDLRT E +
Sbjct: 241 ATAWSMLRARLYEEELKKREEETNAVEASKTEIGWGHQIRSYVLQPYQLVKDLRTGVENT 300
Query: 424 DPDSVLEGDLDGFILSYLS 442
DP +VL GDLD FI + L+
Sbjct: 301 DPQTVLNGDLDIFIEAALA 319
>gi|417971945|ref|ZP_12612861.1| peptide chain release factor 2 [Corynebacterium glutamicum S9114]
gi|344043699|gb|EGV39387.1| peptide chain release factor 2 [Corynebacterium glutamicum S9114]
Length = 368
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 156/358 (43%), Positives = 232/358 (64%), Gaps = 12/358 (3%)
Query: 84 DWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
++ + + + ++ I+K L + ++ R+ L A+ P+LWDDP HA +++ E +
Sbjct: 4 EFSAELSELDSTLTTIEKVLNPQEMSDRVRELEAQAADPSLWDDPDHAQQVTSELSHVQA 63
Query: 144 KMKEVKAFEQELLEHIDMIKLAREEN-DTELELESLEALLTMRRKSKEKELDALLSGELD 202
+++++ Q + + M++LA EE+ DT + + E L +R E+ +LSGE D
Sbjct: 64 ELRKITDLRQRIEDLPIMVELAEEEDGDTSI---AEEELADLRSLIDALEVKTMLSGEYD 120
Query: 203 PCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVD 262
I +++GAGG ++ DWA M+++MY WA++ G++V + D E AGIK AT V
Sbjct: 121 AREAVINIRSGAGGVDAADWAEMLMRMYTRWAEKNGHKVDIYDISYAEEAGIKSATFVVH 180
Query: 263 GEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIER 322
G+Y +G E G HRLVRISPFD+ RR TSFA V V+P + + I ++D+R++
Sbjct: 181 GDYMYGQLSVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVV-EKVDSIDIPDADVRVDV 239
Query: 323 FRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ 382
+RS G GGQ NTTDSAVR+ HIPTGI TCQNE+SQ QNKASAM VLQ+++ LE RQ
Sbjct: 240 YRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKL--LERKRQ 297
Query: 383 ---AQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
A+M+A + + SWGNQ+R+YVLHPY+MVKDLRTN+EV+DP VL+GD++G +
Sbjct: 298 EERAEMDA--LGAGGNASWGNQMRSYVLHPYQMVKDLRTNFEVNDPQKVLDGDINGLL 353
>gi|259506494|ref|ZP_05749396.1| peptide chain release factor 2 [Corynebacterium efficiens YS-314]
gi|259165914|gb|EEW50468.1| peptide chain release factor 2 [Corynebacterium efficiens YS-314]
Length = 387
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 159/346 (45%), Positives = 224/346 (64%), Gaps = 10/346 (2%)
Query: 95 SIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQE 154
++ I+K L + L+ R+ L A+ P LWD+P HA +++ E + ++++V Q
Sbjct: 35 TLTTIEKILNPEELSDRVRELEAQAADPGLWDNPDHAQQVTSELSHVQAELRKVTELRQR 94
Query: 155 LLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGA 214
L + M +LA EE D ++ E L +R + E+ +LSGE D I +++GA
Sbjct: 95 LDDLPIMYELAEEEGDDTSLVD--EELADLRTGVEALEVKTMLSGEYDAREAVINIRSGA 152
Query: 215 GGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEV 274
GG ++ DWA M+++MY WA++ G++V + D E AGIK AT V G+Y +G E
Sbjct: 153 GGVDAADWAEMLMRMYIRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGDYMYGQLSVEQ 212
Query: 275 GVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHAN 334
G HRLVRISPFD+ RR TSFA V V+P + + I +S++R++ +RS G GGQ N
Sbjct: 213 GAHRLVRISPFDNQGRRQTSFAEVEVLPVV-EQVDSIDIPDSEVRVDVYRSSGPGGQSVN 271
Query: 335 TTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ---AQMNAEHTQ 391
TTDSAVR+ HIPTGI TCQNE+SQ QNKASAM VLQ+++ LE RQ A+M+A
Sbjct: 272 TTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKL--LEKKRQEERAEMDA--LG 327
Query: 392 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
+ + SWGNQ+R+YVLHPY+MVKDLRTNYEV+DP VL+GD+DG +
Sbjct: 328 AGGNASWGNQMRSYVLHPYQMVKDLRTNYEVNDPSKVLDGDIDGLL 373
>gi|114320956|ref|YP_742639.1| peptide chain release factor 2 [Alkalilimnicola ehrlichii MLHE-1]
gi|114227350|gb|ABI57149.1| bacterial peptide chain release factor 2 (bRF-2) [Alkalilimnicola
ehrlichii MLHE-1]
Length = 354
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 148/335 (44%), Positives = 222/335 (66%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++ EL +P +W+DP A + RE L G ++ + + L + +++++A +E D
Sbjct: 22 RLEEVTRELEQPEVWNDPERAQSLGRERAQLEGLVETFERLDSVLGDADELLEMAADEGD 81
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
E L R+ ++ E + SGE+DP + ++++QAGAGGTE+ DWA+M+L+MY
Sbjct: 82 EETVAALQSDLGDCERELQKLEFRRMFSGEMDPANAFMDIQAGAGGTEAQDWANMLLRMY 141
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
W +R G++ +++ G+ AGIK AT+K +GEYAFG+ + E+G+HRLVR SPFDSG R
Sbjct: 142 LRWGERHGFKTEIIELSEGDEAGIKSATVKFEGEYAFGWLRTEIGIHRLVRKSPFDSGNR 201
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSFA+V V P D + IN +DLR++ +R+ GAGGQH N T+SAVRI H+P+GI
Sbjct: 202 RHTSFASVFVSPEV-DDDVDIDINPADLRVDVYRASGAGGQHVNRTESAVRITHMPSGIV 260
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQ +RSQH+N+A+AM L+S++ +LE+ ++ + +DI WGNQIR+YVL
Sbjct: 261 VQCQQDRSQHKNRATAMKQLKSKLFELEMQKRRDEAEAVEGTKSDIGWGNQIRSYVLDQS 320
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT EV + +VL+GDLD FI + L A +
Sbjct: 321 R-IKDLRTGVEVGNTQAVLDGDLDQFIEASLKAGV 354
>gi|402496775|ref|YP_006556035.1| protein chain release factor B [Wolbachia endosymbiont of
Onchocerca ochengi]
gi|398650048|emb|CCF78218.1| protein chain release factor B [Wolbachia endosymbiont of
Onchocerca ochengi]
Length = 284
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 137/282 (48%), Positives = 198/282 (70%), Gaps = 2/282 (0%)
Query: 162 IKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMD 221
+K A END E E L+ + + K KE ++L +G+ D C++E+ +GAGGTES D
Sbjct: 1 MKSAINENDKEFFSEVENELIELEKLIKRKEAESLFTGKADINDCFLEIHSGAGGTESND 60
Query: 222 WASMVLQMYKSWAQ-RRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLV 280
WA M++ MY WA+ ++V +++++ GE GIK TIK+ GE A+G+AK+E G+HRLV
Sbjct: 61 WAEMLMNMYIRWAEIYHDFKVEIVEKLEGESVGIKSTTIKIIGEKAYGWAKSESGIHRLV 120
Query: 281 RISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAV 340
RISPFD+ +RHTSFA+V V P DS + ++E DLRI+ +R+ GAGGQH N T+SAV
Sbjct: 121 RISPFDANSKRHTSFASVGVTPVIEDS-IDIAVDEKDLRIDTYRASGAGGQHVNKTESAV 179
Query: 341 RIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGN 400
RI HIPTG+ CQN RSQHQNK A+ +L+ R+ ++E+ ++ Q A+ +I WGN
Sbjct: 180 RITHIPTGVIIQCQNSRSQHQNKNEALKLLKGRLYKIELKKKEQKTAQDYDKKCNIGWGN 239
Query: 401 QIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
QIR+Y++HPY+MVKDLRT YEV + +SV +G++D FI++ L+
Sbjct: 240 QIRSYIMHPYQMVKDLRTGYEVGNINSVFDGNIDCFIVNMLT 281
>gi|406945537|gb|EKD76997.1| hypothetical protein ACD_42C00506G0002 [uncultured bacterium]
Length = 350
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 148/334 (44%), Positives = 217/334 (64%), Gaps = 6/334 (1%)
Query: 110 VRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEN 169
+RL + EL P++W P A + +E L ++ + L + +++ +A+ EN
Sbjct: 18 IRLLEVRRELENPDIWKTPEKAQELGKERSELESIVEGLDTIASRLSDASELLDIAKSEN 77
Query: 170 DTEL--ELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVL 227
D L E+++ A +TM + E + SGE+DP + Y+E+Q+G+GGTE+ DWA M+L
Sbjct: 78 DEPLLQEIKNDVADITMH--VERIEFRRMFSGEMDPNNAYLEIQSGSGGTEAQDWAEMLL 135
Query: 228 QMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDS 287
+MY W + G+R T+ GE+AGIK A + V+GEYAFG+ + E GVHRLVR SPFDS
Sbjct: 136 RMYLRWCTQHGFRATIESISAGEVAGIKNAVVYVEGEYAFGWLRTETGVHRLVRKSPFDS 195
Query: 288 GKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPT 347
G RRHTSFA+V + P D ++IN +D+R++ FR+ GAGGQH N TDSA+R+ HIPT
Sbjct: 196 GNRRHTSFASVFISPEIND-DIQIEINMADVRVDTFRASGAGGQHVNKTDSAIRMTHIPT 254
Query: 348 GITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVL 407
CQ+ERSQH+N+ASA+ L++++ +LE+ ++ + S DISWG+QIR+YVL
Sbjct: 255 NTVVQCQSERSQHKNRASALKQLRAKLYELEMQKKREKQDAIEDSKMDISWGSQIRSYVL 314
Query: 408 HPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
R +KDLRT E +D VL+GDLD FI++ L
Sbjct: 315 DQSR-IKDLRTGVERTDTQKVLDGDLDKFIVATL 347
>gi|378581170|ref|ZP_09829820.1| peptide chain release factor RF-2 [Pantoea stewartii subsp.
stewartii DC283]
gi|377816249|gb|EHT99354.1| peptide chain release factor RF-2 [Pantoea stewartii subsp.
stewartii DC283]
Length = 364
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 150/335 (44%), Positives = 217/335 (64%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++AEL + ++W++P A + +E SL + + Q L + ++ LA E +D
Sbjct: 32 RLEEVNAELEQSDVWNEPERAQALGKERSSLEAIVNTLDQMTQGLEDVQGLLDLAVEADD 91
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
E E++E L + K E E + SGE D CYI++QAG+GGTE+ DWASM+++MY
Sbjct: 92 EETFNEAVEELDALDVKLGELEFRRMFSGEYDSADCYIDLQAGSGGTEAQDWASMLMRMY 151
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA+ +G++ +++E GE+AGIK TI+V G+YAFG+ + E GVHRLVR SPFDSG R
Sbjct: 152 LRWAEAKGFKTEIIEESEGEVAGIKSVTIRVSGDYAFGWLRTETGVHRLVRKSPFDSGGR 211
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSF++ + P + IN +DLRI+ +R+ GAGGQH N T+SAVRI HIPTG
Sbjct: 212 RHTSFSSAFIYPEVD-DDIDIDINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTGTV 270
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+NK AM +++++ +LE+ ++ + +DI WG+QIR+YVL
Sbjct: 271 TQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQALEDNKSDIGWGSQIRSYVLDDS 330
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E + +VL+GDLD FI + L A L
Sbjct: 331 R-IKDLRTGVETRNTQAVLDGDLDRFIEASLKAGL 364
>gi|335998126|ref|ZP_08564038.1| peptide chain release factor 2 [Lactobacillus ruminis SPM0211]
gi|417972748|ref|ZP_12613636.1| peptide chain release factor 2 [Lactobacillus ruminis ATCC 25644]
gi|335348640|gb|EGM50141.1| peptide chain release factor 2 [Lactobacillus ruminis SPM0211]
gi|346330813|gb|EGX99044.1| peptide chain release factor 2 [Lactobacillus ruminis ATCC 25644]
Length = 332
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 147/327 (44%), Positives = 209/327 (63%), Gaps = 1/327 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
P+ W++ A ++ E+ L K E+ + + ++++ +E++D EL E E
Sbjct: 4 PDFWNNQEEAQKVINENNELKNKYDNFNQLEEAIEDLEVLLEMVQEDDDDELVSELSEKF 63
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
++K +E +L LL+G+ D + +E+ GAGGTES DW SM+L+MY WA++ G+ V
Sbjct: 64 ELAQKKMQEYQLSLLLNGKYDKDNAILELHPGAGGTESQDWGSMLLRMYTRWAEQHGFSV 123
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
D G+ AGIK T+ + G A+GY ++E GVHRLVRISPFDS RRHTSF +V V+
Sbjct: 124 ETDDYQAGDEAGIKSVTLTISGHNAYGYLRSEKGVHRLVRISPFDSAGRRHTSFCSVNVM 183
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D V + D+++E FRS GAGGQH N T SAVR+IHIPTGI + Q +RSQ Q
Sbjct: 184 PEL-DDDVEVDLRPEDIKMEVFRSSGAGGQHINKTSSAVRLIHIPTGIVVSSQAQRSQFQ 242
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
N+A+A +L+S++ Q+E+ Q + A DI WG+QIR+YV HPY MVKD RTNYE
Sbjct: 243 NRATAEKMLRSKLYQMELEEQEKKRAAIQGEQLDIGWGSQIRSYVFHPYSMVKDHRTNYE 302
Query: 422 VSDPDSVLEGDLDGFILSYLSASLDKD 448
+ SV++GDLDGFI +YL +L K+
Sbjct: 303 TGNISSVMDGDLDGFINAYLQWNLKKE 329
>gi|407974333|ref|ZP_11155242.1| peptide chain release factor 2 [Nitratireductor indicus C115]
gi|407430022|gb|EKF42697.1| peptide chain release factor 2 [Nitratireductor indicus C115]
Length = 322
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 150/317 (47%), Positives = 207/317 (65%), Gaps = 1/317 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + V+ L +++ +I+L EE D + E+ AL + ++++
Sbjct: 2 RERQMLDDGINAVRGLSAALEDNVGLIELGEEEGDDSVVREAEAALKALSEDVAARQVET 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+EV AGAGGTES DWA M+L+MY WA R G +V +++ GE AGIK
Sbjct: 62 LLSGEADSNDTYLEVHAGAGGTESQDWAQMLLRMYTRWADRHGMKVEVLEMHDGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
AT+ + G A+G+ K E GVHRLVRISPFDS RRHTSFA+ V P D + + I E
Sbjct: 122 SATLLIKGRNAYGWLKTESGVHRLVRISPFDSNARRHTSFASAWVYPVV-DDTIAIDIPE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
S++RI+ +R+ GAGGQH NTTDSAVRI HIP+GI CQ ERSQH+N+A+A +L+SR+
Sbjct: 181 SEVRIDTYRASGAGGQHVNTTDSAVRITHIPSGIVVQCQKERSQHKNRATAWEMLRSRLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ ++ + + S TDI WG+QIR+YVL PY++VKDLRT E + P VL+GDLD
Sbjct: 241 EEELKKREEAASATEASKTDIGWGHQIRSYVLQPYQLVKDLRTGVESTSPQDVLDGDLDT 300
Query: 436 FILSYLSASLDKDEGGQ 452
F+ + LS ++ G +
Sbjct: 301 FMEASLSQRIEGGAGAE 317
>gi|387779889|ref|YP_005754687.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
LGA251]
gi|344176991|emb|CCC87455.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
LGA251]
Length = 369
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 148/355 (41%), Positives = 220/355 (61%)
Query: 94 QSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQ 153
Q + I+ L +N + + +PN WD+ A I ++ +L + KA +
Sbjct: 15 QDLTQIRGSLDLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKALQA 74
Query: 154 ELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAG 213
E+ + L +EE D E++ + + ++ + K E EL LL G D + +E+ G
Sbjct: 75 EVDDMDATWDLLQEEFDEEMKEDLEQEVINFKAKVDEYELQLLLDGPHDANNAILELHPG 134
Query: 214 AGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAE 273
AGGTES DWA+M+ +MY+ + +++G++V +D +PG+ AGIK T+ + G A+GY KAE
Sbjct: 135 AGGTESQDWANMLFRMYQRYCEKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAE 194
Query: 274 VGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHA 333
GVHRLVRISPFDS RRHTSFA+ VIP+ + ++IN D+ ++ FR+ GAGGQH
Sbjct: 195 KGVHRLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHI 254
Query: 334 NTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSL 393
N T+SA+RI H P+GI QNERSQ +N+ +AM +L+S++ QL++ QA+ AE
Sbjct: 255 NKTESAIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQ 314
Query: 394 TDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKD 448
+I WG+QIR+YV HPY MVKD RTN E D+V++GD+ FI SYL ++ D
Sbjct: 315 KEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYLRQTMSHD 369
>gi|387770358|ref|ZP_10126541.1| peptide chain release factor 2 [Pasteurella bettyae CCUG 2042]
gi|386904720|gb|EIJ69509.1| peptide chain release factor 2 [Pasteurella bettyae CCUG 2042]
Length = 364
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 148/335 (44%), Positives = 219/335 (65%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++AEL +P++W++P A + +E +L + +K +Q L + +++LA E D
Sbjct: 32 RLEEVNAELEQPDVWNNPEKAQALGKERSALEIVVNTIKKLDQGLEDVDGLLELAIEGED 91
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
E E++ L + ++ + E + SGE D C CY+++QAG+GGTE+ DW M+L+MY
Sbjct: 92 EETFNEAVAELEDLEKQLEILEFRRMFSGEHDACDCYVDLQAGSGGTEAQDWTEMLLRMY 151
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA+ +G++ LM+ G++AG+K ATI+V GEYAFG+ + E G+HRLVR SPFDS R
Sbjct: 152 LRWAESKGFKTELMEVSDGDVAGLKSATIRVSGEYAFGWLRTETGIHRLVRKSPFDSNNR 211
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSFAA + P ++IN +DLRI+ +R+ GAGGQH N T+SAVRI HIP+GI
Sbjct: 212 RHTSFAAAFIYPEID-DDIDIEINPADLRIDVYRASGAGGQHVNRTESAVRITHIPSGIV 270
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+NK M L++++ ++E+ ++ S +DI WG+QIR+YVL
Sbjct: 271 VQCQNDRSQHKNKDQCMKQLKAKLYEMELQKKNADKQALEDSKSDIGWGSQIRSYVLDDA 330
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E + +VL+GDLD FI + L A L
Sbjct: 331 R-IKDLRTGVENRNTQAVLDGDLDKFIEASLKAGL 364
>gi|238019424|ref|ZP_04599850.1| hypothetical protein VEIDISOL_01293 [Veillonella dispar ATCC 17748]
gi|237864123|gb|EEP65413.1| hypothetical protein VEIDISOL_01293 [Veillonella dispar ATCC 17748]
Length = 330
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 143/323 (44%), Positives = 211/323 (65%), Gaps = 1/323 (0%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
++ P WDDP A IS+E L ++ K ++ + M+++A EE+D LE E
Sbjct: 1 MSDPTFWDDPDKAREISQEATQLKNAVESYKQLVSDIEDANVMLEMAIEEDDRSLEGEIK 60
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
+ + + +++E+ LLSGE D + + AGAGGTE+ DW SM+++MY WA++ G
Sbjct: 61 DYVQQIEETVEKQEVLLLLSGEYDANNAILTFHAGAGGTEAQDWCSMLIRMYLRWAEKAG 120
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
+ + LMDE PG+ AG K AT + GE AFGY K+E GVHRLVRISPFD+ RRHTSFAAV
Sbjct: 121 FSIELMDEQPGDEAGTKSATFLIKGENAFGYLKSEKGVHRLVRISPFDAAARRHTSFAAV 180
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
V+P D + + I+ D++++ +R+ GAGGQH N TDSAVR+ H PTGI CQ +RS
Sbjct: 181 DVMPEI-DDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHRPTGIVVQCQTQRS 239
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
Q QN+ A+ +L++++ +LE+ +QA++ + + I WG+QIR+YV HPY +VKD RT
Sbjct: 240 QMQNREQALRLLRAKLFELELEKQAELKEQIGGTYQAIEWGSQIRSYVFHPYNLVKDHRT 299
Query: 419 NYEVSDPDSVLEGDLDGFILSYL 441
E + SV++G+LD F+ +L
Sbjct: 300 GVETGNVQSVMDGNLDQFMEGFL 322
>gi|25027367|ref|NP_737421.1| peptide chain release factor 2 [Corynebacterium efficiens YS-314]
gi|23492648|dbj|BAC17621.1| putative translation releasing factor RF-2 [Corynebacterium
efficiens YS-314]
Length = 389
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 159/346 (45%), Positives = 224/346 (64%), Gaps = 10/346 (2%)
Query: 95 SIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQE 154
++ I+K L + L+ R+ L A+ P LWD+P HA +++ E + ++++V Q
Sbjct: 37 TLTTIEKILNPEELSDRVRELEAQAADPGLWDNPDHAQQVTSELSHVQAELRKVTELRQR 96
Query: 155 LLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGA 214
L + M +LA EE D ++ E L +R + E+ +LSGE D I +++GA
Sbjct: 97 LDDLPIMYELAEEEGDDTSLVD--EELADLRTGVEALEVKTMLSGEYDAREAVINIRSGA 154
Query: 215 GGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEV 274
GG ++ DWA M+++MY WA++ G++V + D E AGIK AT V G+Y +G E
Sbjct: 155 GGVDAADWAEMLMRMYIRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGDYMYGQLSVEQ 214
Query: 275 GVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHAN 334
G HRLVRISPFD+ RR TSFA V V+P + + I +S++R++ +RS G GGQ N
Sbjct: 215 GAHRLVRISPFDNQGRRQTSFAEVEVLPVV-EQVDSIDIPDSEVRVDVYRSSGPGGQSVN 273
Query: 335 TTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ---AQMNAEHTQ 391
TTDSAVR+ HIPTGI TCQNE+SQ QNKASAM VLQ+++ LE RQ A+M+A
Sbjct: 274 TTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKL--LEKKRQEERAEMDA--LG 329
Query: 392 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
+ + SWGNQ+R+YVLHPY+MVKDLRTNYEV+DP VL+GD+DG +
Sbjct: 330 AGGNASWGNQMRSYVLHPYQMVKDLRTNYEVNDPSKVLDGDIDGLL 375
>gi|323340175|ref|ZP_08080439.1| peptide chain release factor RF2 [Lactobacillus ruminis ATCC 25644]
gi|323092366|gb|EFZ34974.1| peptide chain release factor RF2 [Lactobacillus ruminis ATCC 25644]
Length = 358
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 147/332 (44%), Positives = 212/332 (63%), Gaps = 1/332 (0%)
Query: 117 AELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELE 176
+++ P+ W++ A ++ E+ L K E+ + + ++++ +E++D EL E
Sbjct: 25 SKMADPDFWNNQEEAQKVINENNELKNKYDNFNQLEEAIEDLEVLLEMVQEDDDDELVSE 84
Query: 177 SLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQR 236
E ++K +E +L LL+G+ D + +E+ GAGGTES DW SM+L+MY WA++
Sbjct: 85 LSEKFELAQKKMQEYQLSLLLNGKYDKDNAILELHPGAGGTESQDWGSMLLRMYTRWAEQ 144
Query: 237 RGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFA 296
G+ V D G+ AGIK T+ + G A+GY ++E GVHRLVRISPFDS RRHTSF
Sbjct: 145 HGFSVETDDYQAGDEAGIKSVTLTISGHNAYGYLRSEKGVHRLVRISPFDSAGRRHTSFC 204
Query: 297 AVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNE 356
+V V+P D V + D+++E FRS GAGGQH N T SAVR+IHIPTGI + Q +
Sbjct: 205 SVNVMPEL-DDDVEVDLRPEDIKMEVFRSSGAGGQHINKTSSAVRLIHIPTGIVVSSQAQ 263
Query: 357 RSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDL 416
RSQ QN+A+A +L+S++ Q+E+ Q + A DI WG+QIR+YV HPY MVKD
Sbjct: 264 RSQFQNRATAEKMLRSKLYQMELEEQEKKRAAIQGEQLDIGWGSQIRSYVFHPYSMVKDH 323
Query: 417 RTNYEVSDPDSVLEGDLDGFILSYLSASLDKD 448
RTNYE + SV++GDLDGFI +YL +L K+
Sbjct: 324 RTNYETGNISSVMDGDLDGFINAYLQWNLKKE 355
>gi|407478095|ref|YP_006791972.1| peptide chain release factor 2 [Exiguobacterium antarcticum B7]
gi|407062174|gb|AFS71364.1| Peptide chain release factor 2 [Exiguobacterium antarcticum B7]
Length = 366
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 153/357 (42%), Positives = 223/357 (62%), Gaps = 3/357 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
++ A + + + K L +N R+ L E+ P+ W++ A ++ E L +
Sbjct: 7 RNTAEWMEKKLDEYKASLDLENKISRIEELENEMTYPDFWNNQESAQKVIDESNGLKAMV 66
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALL-TMRRKSKEKELDALLSGELDPC 204
+ + + +L +EE D EL+ E LE+ L ++RK E EL LL+GE D
Sbjct: 67 DKYQHLADGHENIVLTYELIKEEPDVELQ-EDLESELGDIKRKFDEFELQILLNGEYDAN 125
Query: 205 SCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGE 264
+ +E+ GAGGTES DWASM+L+MY+ + ++G++V MD PG+ AG+K T+++ G
Sbjct: 126 NAILELHPGAGGTESQDWASMLLRMYQRFCDKQGWKVETMDYQPGDEAGVKSVTLRIQGH 185
Query: 265 YAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFR 324
A+GY KAE G+HRLVRISPFDS RRHTSF + V+P D + I DLR++ +R
Sbjct: 186 NAYGYLKAEKGIHRLVRISPFDSSGRRHTSFVSCDVMPEFND-DIDIDIRTEDLRVDTYR 244
Query: 325 SGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQ 384
+ GAGGQH NTTDSAVRI HIPT + +CQ ERSQ +N+ +AM +L++++ Q EI + +
Sbjct: 245 ASGAGGQHINTTDSAVRITHIPTNVVVSCQQERSQIKNREAAMKMLKAKLYQREIEEKQK 304
Query: 385 MNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
E +DI+WG+QIR+YV HPY MVKD RTNYEV + ++GD+ GFI +YL
Sbjct: 305 KLDEIRGEKSDIAWGSQIRSYVFHPYSMVKDHRTNYEVGNTQGAMDGDIMGFIDAYL 361
>gi|422875084|ref|ZP_16921569.1| peptide chain release factor 2 [Clostridium perfringens F262]
gi|380304079|gb|EIA16372.1| peptide chain release factor 2 [Clostridium perfringens F262]
Length = 323
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 139/325 (42%), Positives = 214/325 (65%), Gaps = 2/325 (0%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
+ + WDD A +++E + K+ + K E ++ ++++K EEND E E +
Sbjct: 1 MQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNL-NERIDDVEVLKELMEENDEETAKEII 59
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
+ + ++ +++ +LSGE D + + G GG+++ DW M+L+MY W +++G
Sbjct: 60 SEVKALSKEIDTLKIEIILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWCEKKG 119
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
Y + +D +PG+ AG+K T+KV GE+A+GY KAE G+HRLVRISPF++ +R TSFA+V
Sbjct: 120 YSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASV 179
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
V+P S ++IN DLRI+ +R+GGAGGQH N T+SAVRI HIPTGI CQNERS
Sbjct: 180 EVLPELT-SDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERS 238
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
Q N+ +AMG+L+S++ +L+ + + T L D+ WG+QIR+YV HPY MVKD RT
Sbjct: 239 QFSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKDHRT 298
Query: 419 NYEVSDPDSVLEGDLDGFILSYLSA 443
N E S+ + V++GD+D FI++YL++
Sbjct: 299 NVETSNVNGVMDGDIDNFIIAYLNS 323
>gi|336118944|ref|YP_004573716.1| peptide chain release factor 2 [Microlunatus phosphovorus NM-1]
gi|334686728|dbj|BAK36313.1| peptide chain release factor 2 [Microlunatus phosphovorus NM-1]
Length = 368
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 161/359 (44%), Positives = 230/359 (64%), Gaps = 8/359 (2%)
Query: 84 DWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
D+ + +A+ +++ I+ + V + LS ++ P+LWDD +A RI+ +L
Sbjct: 5 DYPAELSALDKALTSIEAVVDPAAKKVEIAELSEQVAAPDLWDDVDNAQRITSRLSALQS 64
Query: 144 KMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDP 203
++ V L + +I+LA EE+D E+ L +++ + E+ LLSGE DP
Sbjct: 65 EIDRVADLRSRLDDLSVLIELATEESDAASLAEAEAELSSLQHAVESLEVRTLLSGEYDP 124
Query: 204 CSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDG 263
+ +++ AGG ++ D+A+M+L+MY WA+R GY + D E AGIK AT +V
Sbjct: 125 REALVTIRSEAGGVDAADFAAMLLRMYLRWAERHGYPAEVYDTSYAEEAGIKSATFQVKA 184
Query: 264 EYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERF 323
YA+G E G HRLVRISPFD+ RR TSFA V V+P + + + H+ I E+D+RI+ F
Sbjct: 185 PYAYGTLSVEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVT-EEADHIDIPEADIRIDVF 243
Query: 324 RSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIA--- 380
RS G GGQ NTTDSAVRI H+PTGI +CQNE+SQ QNKA+A+ VLQ+R+ LE A
Sbjct: 244 RSSGPGGQSVNTTDSAVRITHLPTGIVVSCQNEKSQLQNKAAALRVLQARL--LEKARRD 301
Query: 381 RQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILS 439
R+A+MNA SWG+Q+R+YVLHPY+MVKDLRT++EVS PD+V +G+LDGFI S
Sbjct: 302 REAEMNALKGDGGN--SWGSQMRSYVLHPYQMVKDLRTDFEVSSPDAVFDGELDGFIES 358
>gi|296112892|ref|YP_003626830.1| peptide chain release factor 2 [Moraxella catarrhalis RH4]
gi|416155726|ref|ZP_11604019.1| peptide chain release factor 2 [Moraxella catarrhalis 101P30B1]
gi|416222021|ref|ZP_11625985.1| peptide chain release factor 2 [Moraxella catarrhalis 103P14B1]
gi|416233334|ref|ZP_11629254.1| peptide chain release factor 2 [Moraxella catarrhalis 12P80B1]
gi|416239395|ref|ZP_11631945.1| peptide chain release factor 2 [Moraxella catarrhalis BC1]
gi|416241810|ref|ZP_11632944.1| peptide chain release factor 2 [Moraxella catarrhalis BC7]
gi|416247619|ref|ZP_11635802.1| peptide chain release factor 2 [Moraxella catarrhalis BC8]
gi|416254484|ref|ZP_11638750.1| peptide chain release factor 2 [Moraxella catarrhalis O35E]
gi|421779706|ref|ZP_16216198.1| peptide chain release factor 2 [Moraxella catarrhalis RH4]
gi|295920586|gb|ADG60937.1| peptide chain release factor 2 [Moraxella catarrhalis BBH18]
gi|326564445|gb|EGE14672.1| peptide chain release factor 2 [Moraxella catarrhalis 103P14B1]
gi|326566640|gb|EGE16781.1| peptide chain release factor 2 [Moraxella catarrhalis 12P80B1]
gi|326567583|gb|EGE17698.1| peptide chain release factor 2 [Moraxella catarrhalis BC1]
gi|326569431|gb|EGE19491.1| peptide chain release factor 2 [Moraxella catarrhalis BC8]
gi|326571371|gb|EGE21386.1| peptide chain release factor 2 [Moraxella catarrhalis BC7]
gi|326576569|gb|EGE26476.1| peptide chain release factor 2 [Moraxella catarrhalis 101P30B1]
gi|326577414|gb|EGE27298.1| peptide chain release factor 2 [Moraxella catarrhalis O35E]
gi|407813416|gb|EKF84198.1| peptide chain release factor 2 [Moraxella catarrhalis RH4]
Length = 349
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 156/336 (46%), Positives = 222/336 (66%), Gaps = 4/336 (1%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++ EL P++W++P A +IS+E L G + + +L + M++LA E++D
Sbjct: 17 RLEEVNLELENPDIWNNPDLATKISKEKSVLDGIVGVIDGLSAKLDDAAAMLELAVEDDD 76
Query: 171 TELELESLEALLTMRRKSKEK-ELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
L L ++A L S E+ E + SGE+D +CY+++Q+G+GGTE+ DWA M+L+M
Sbjct: 77 ESL-LSDVQAELDDALNSVEELEFRRMFSGEMDANNCYLDIQSGSGGTEAQDWAQMLLRM 135
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y W + G++ +++ G +AGIK ATI V G+YAFG+ + E+GVHRLVR SPFDS
Sbjct: 136 YLRWCESHGFKAEVLEVSEGGVAGIKSATIMVKGDYAFGWLRTEIGVHRLVRKSPFDSNN 195
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RHTSFAAV V P + + IN +DLRI+ +RS GAGGQH NTTDSAVRI H PTG+
Sbjct: 196 GRHTSFAAVFVSPEID-DNIDIDINPADLRIDTYRSSGAGGQHVNTTDSAVRITHQPTGV 254
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHP 409
CQNERSQH NK +AM +L++++ +LE+ ++ + +S +DI WG+QIR+YVL
Sbjct: 255 VVACQNERSQHANKDTAMKMLRAKLYELEMQKRMEKQQALEESKSDIGWGSQIRSYVLDD 314
Query: 410 YRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E S+ +VL GDLD FI + L A L
Sbjct: 315 SR-IKDLRTGVETSNTTAVLNGDLDKFIEASLKAGL 349
>gi|357974462|ref|ZP_09138433.1| peptide chain release factor 2 [Sphingomonas sp. KC8]
Length = 321
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 145/307 (47%), Positives = 208/307 (67%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + +A E E+ + ++++++A E D+ + +++ L + +++ ++ A
Sbjct: 2 RERRRLDEAITATRAIENEVRDTVELMEMAEAEGDSGMVDDAVATLAALAERAERDKVQA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LL+GE D + YIEV AGAGGTES DWA M+ +MY WA+R G +V L+D GE AGIK
Sbjct: 62 LLAGEADGNNAYIEVNAGAGGTESQDWAGMLQRMYARWAERHGMKVELVDFHAGEQAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
AT+ + GE A+G+ K E GVHRLVRISP+DS RRHTSFA+V V P D +++ +
Sbjct: 122 SATLMIRGENAYGHCKTESGVHRLVRISPYDSAARRHTSFASVWVYPEV-DDDIDIEVLD 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
DL+I+ +R+ GAGGQH NTTDSAVRI H+PTGI CQN+RSQH+N+A AM L++R+
Sbjct: 181 KDLKIDTYRASGAGGQHVNTTDSAVRITHVPTGIIVACQNQRSQHKNRAEAMKQLKARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ R+ +E + T+I WG+QIR+YVL PY++VKDLRT + P VL+G LD
Sbjct: 241 ERELQRREAEASEGYAAKTEIGWGHQIRSYVLQPYQLVKDLRTGVTSTAPSDVLDGALDP 300
Query: 436 FILSYLS 442
F+ + LS
Sbjct: 301 FMAAALS 307
>gi|73666975|ref|YP_302991.1| peptide chain release factor 2 [Ehrlichia canis str. Jake]
gi|72394116|gb|AAZ68393.1| bacterial peptide chain release factor 2 (bRF-2) [Ehrlichia canis
str. Jake]
Length = 335
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 144/333 (43%), Positives = 222/333 (66%), Gaps = 5/333 (1%)
Query: 115 LSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELE 174
L+ + + +LW D A I E + + E+E + +++ + + NDT+
Sbjct: 5 LNVQCSSTSLWTDNALAQNILSERARVSKIITSFTELEEEFNYYTELLDVVK--NDTDEL 62
Query: 175 LESLEALLT-MRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSW 233
L +E LT ++ + ++KE++ L S E D C+IE+Q+GAGGTES DW+ M+L+MY W
Sbjct: 63 LNDIEIGLTKLKERIQKKEVECLFSNEADQNDCFIEIQSGAGGTESNDWSCMLLRMYVRW 122
Query: 234 AQ-RRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRH 292
A+ + ++ ++ GE GIK ATIKV G+ A+G++K E G+HRLVRISPF+S +RH
Sbjct: 123 AEIYHNFTTEIVYKLDGEEVGIKSATIKVTGDNAYGWSKTESGIHRLVRISPFNSNAKRH 182
Query: 293 TSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITAT 352
T+F+++ V P + D + +++ + DLRI+ +R+ GAGGQH N T+SAVRI HIP+GI
Sbjct: 183 TTFSSILVSPIT-DENINIETLDKDLRIDTYRASGAGGQHVNKTESAVRITHIPSGIVVQ 241
Query: 353 CQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRM 412
CQN RSQHQN A A +L+SR+ QL++ + + AE +I WGNQIR+Y++HPY+M
Sbjct: 242 CQNNRSQHQNLAEAHNLLKSRLYQLKLQEKEKKMAEEHNKRCNIGWGNQIRSYIMHPYQM 301
Query: 413 VKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
VKD+RT +E+ + +SVL+G+LD FI+S L+A +
Sbjct: 302 VKDVRTGHEIGNVNSVLDGNLDPFIISALTAKI 334
>gi|403236255|ref|ZP_10914841.1| peptide chain release factor 2 [Bacillus sp. 10403023]
Length = 327
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 150/329 (45%), Positives = 212/329 (64%), Gaps = 3/329 (0%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMI-KLAREENDTELELES 177
++ P+ W+D A I E +L ++ E + E++++ +L +EE D +L+ E
Sbjct: 1 MSMPDFWNDQNAAQTIINEANALKDQVVEFTNL-HDSYENLELTYQLVKEEPDADLQAEL 59
Query: 178 LEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRR 237
E + + + E EL LLS D + +E+ GAGGTES DW SM+L+MY WA++R
Sbjct: 60 DEEIQELSKSVSEFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKR 119
Query: 238 GYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAA 297
G++V +D +PG+ AGIK T+ + G A+GY KAE GVHRLVRISPFDS RRHTSF +
Sbjct: 120 GFKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 179
Query: 298 VAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNER 357
V+P D ++I DL+I+ +R+ GAGGQH NTTDSAVRI H+PT TCQNER
Sbjct: 180 CEVMPEFSD-DIEIEIRSEDLKIDTYRASGAGGQHINTTDSAVRITHLPTNTVVTCQNER 238
Query: 358 SQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLR 417
SQ +N+ AM +L+S++ Q+EI +Q E +I WG+QIR+YV HPY MVKD R
Sbjct: 239 SQIKNREQAMKMLKSKLYQVEIEKQQAELDEIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 298
Query: 418 TNYEVSDPDSVLEGDLDGFILSYLSASLD 446
TN EV + SV++G++D FI +YL + L+
Sbjct: 299 TNVEVGNTGSVMDGEIDLFIDAYLRSKLN 327
>gi|89094633|ref|ZP_01167570.1| peptide chain release factor 2, programmed frameshift
[Neptuniibacter caesariensis]
gi|89081103|gb|EAR60338.1| peptide chain release factor 2, programmed frameshift
[Neptuniibacter caesariensis]
Length = 364
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 146/354 (41%), Positives = 225/354 (63%), Gaps = 2/354 (0%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
I + + ++ L ++ RL +S EL P +WDDP +A ++ +E +L + +
Sbjct: 13 IKERTEALRGFLDYETKQERLEEVSRELEDPAVWDDPENAQKLGKERSTLEAVVGTIDDL 72
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
+ + D++ +A EE+D + E + M + ++ E + +GE DP + ++++Q
Sbjct: 73 TAGVADTRDLLDMAVEEDDEDTVAEVESDVTAMLDRLQQLEFRRMFAGEADPNNAFLDIQ 132
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AG+GGTE+ DWA M+L+MY W + +G++ L++ G++AGIK ATI GEYAFG+ +
Sbjct: 133 AGSGGTEAQDWAEMMLRMYLRWGEDKGFKTELLECSAGDVAGIKSATISFQGEYAFGWLR 192
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
E GVHRLVR SPFDSG RRHTSF++V V P D + ++IN +DLR++ +R+ GAGGQ
Sbjct: 193 TETGVHRLVRKSPFDSGGRRHTSFSSVFVSPEI-DDNIDIEINPADLRVDVYRASGAGGQ 251
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQ 391
H N T+SAVRI H P+GI Q +RSQHQNK + M L++++ ++E+ ++ + E
Sbjct: 252 HVNRTESAVRITHEPSGIVVQSQAQRSQHQNKDTCMKQLRAKLYEVEMLKRTEAAQEQED 311
Query: 392 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ DI WG+QIR+YVL R +KDLRT + S+ D VL+GDLD FI + L A L
Sbjct: 312 NKADIGWGSQIRSYVLDDQR-IKDLRTGVQSSNCDKVLDGDLDMFIEASLKAGL 364
>gi|398803760|ref|ZP_10562778.1| peptide chain release factor 2 [Polaromonas sp. CF318]
gi|398096013|gb|EJL86344.1| peptide chain release factor 2 [Polaromonas sp. CF318]
Length = 355
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 151/332 (45%), Positives = 214/332 (64%), Gaps = 4/332 (1%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
+LN ++A L P +WD+P A + +E SL + + EL ++ ++ ++++ E D
Sbjct: 23 KLNEVNAALEDPKVWDNPKRAQELGKEKKSLEDVVHVIDRLSSELSDNSELFEMSKGEGD 82
Query: 171 TELELESLEALLTMRRKSKEK-ELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
+ + ++E EK E + + DP C++++QAGAGGTE+ DWASM+L+
Sbjct: 83 -DAGMATIEGEAAKIAAEVEKMEFRRMFNNPADPLPCFLDIQAGAGGTEACDWASMLLRQ 141
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y +A+R+G++ T+ DE PG+ AGIK ATIK++GEYAFG + E GVHRLVR SPFDS
Sbjct: 142 YLKYAERKGFKTTVEDESPGDTAGIKGATIKIEGEYAFGLLRTETGVHRLVRKSPFDSSG 201
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RHTSFA+V V P D S ++IN +D+R + FR+ GAGGQH N TDSAVR+ HIPTGI
Sbjct: 202 GRHTSFASVFVYPEI-DDSIEIEINPADVRTDTFRASGAGGQHINKTDSAVRLTHIPTGI 260
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHP 409
CQ+ RSQH N+ A L+SR+ E+ +Q + + + TD+ WG+QIR+YVL
Sbjct: 261 VVQCQDGRSQHSNRDVAWKRLRSRLYDFELRKQQEAQQKLEDTKTDVGWGHQIRSYVLDN 320
Query: 410 YRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
R +KDLRTN EVS VL+GDLD FI + L
Sbjct: 321 SR-IKDLRTNVEVSATQKVLDGDLDVFIEASL 351
>gi|329928717|ref|ZP_08282566.1| peptide chain release factor 2 [Paenibacillus sp. HGF5]
gi|328937498|gb|EGG33916.1| peptide chain release factor 2 [Paenibacillus sp. HGF5]
Length = 339
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 148/327 (45%), Positives = 209/327 (63%), Gaps = 1/327 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
P+ WDD A + E S+ + + + + + + + MI+LA EE D L E E +
Sbjct: 12 PDFWDDNEKAQALIAEMNSVKSSVDQYQKLQADYDDAVVMIELADEEGDDSLAGEIGETI 71
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
+ + +E EL LL+ D + +E+ GAGGTES DW M+ +MY WA++RG++V
Sbjct: 72 KDLVGRVEEFELQLLLNQPYDKMNAILELHPGAGGTESQDWGQMLHRMYTRWAEKRGFKV 131
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
+D +PG+ AGIK T+ + G A+GY KAE GVHRLVRISPFDS RRHTSF + V+
Sbjct: 132 ETLDYLPGDEAGIKSVTLLIKGFNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCDVV 191
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D + I DL+I+ +R+ GAGGQH NTTDSAVRI H+PTG+ TCQNERSQ +
Sbjct: 192 PEIND-EVELDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTGVVVTCQNERSQIK 250
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
N+ AM +L+S++ + +I Q + AE +DI+WG+QIR+YV HPY MVKD RT E
Sbjct: 251 NRERAMTMLRSKLYERKIEEQQKELAEIRGEQSDIAWGSQIRSYVFHPYSMVKDHRTQVE 310
Query: 422 VSDPDSVLEGDLDGFILSYLSASLDKD 448
+ +V++GDLDGFI YL + + ++
Sbjct: 311 TGNIGAVMDGDLDGFIDGYLRSQIKQE 337
>gi|297620623|ref|YP_003708760.1| Peptide chain release factor 2 [Waddlia chondrophila WSU 86-1044]
gi|297375924|gb|ADI37754.1| Peptide chain release factor 2 [Waddlia chondrophila WSU 86-1044]
gi|337292373|emb|CCB90402.1| peptide chain release factor 2 [Waddlia chondrophila 2032/99]
Length = 326
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 143/318 (44%), Positives = 205/318 (64%), Gaps = 1/318 (0%)
Query: 124 LWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLT 183
WDDP A ++ E SL K ++ L + ++ A E D L + + L
Sbjct: 6 FWDDPDAAQQVITEINSLKQWTIPCKELKRRLEDVKELQPEAEEAGDEGLLADLNQELFR 65
Query: 184 MRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTL 243
+ + E E+ +LSGELD +CY+ + AGAGGTE+ DW M+ +MY+ W +R ++ +
Sbjct: 66 IENELGELEIRRMLSGELDNKNCYLSINAGAGGTEACDWVEMLSRMYQRWCDKRKWKCEV 125
Query: 244 MDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPN 303
+D +PGE+AG K T+K+ G +AFGY+KAE GVHRLVRISPFDSG RRHTSFA+V V P
Sbjct: 126 VDMVPGEVAGTKSVTLKMTGNFAFGYSKAEKGVHRLVRISPFDSGSRRHTSFASVDVTPE 185
Query: 304 SGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNK 363
D ++IN D+RI+ FR+ GAGGQH N TDSAVR+ HIPTG+ +CQ++RSQ+QNK
Sbjct: 186 ITD-DIQIEINPDDIRIDTFRASGAGGQHVNVTDSAVRMTHIPTGVVVSCQSQRSQNQNK 244
Query: 364 ASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVS 423
+ +L+S++ ++E+ + + E DI WG+QIR YV HPY +VKD RT E +
Sbjct: 245 EACFKILKSKLYEMEVMEREKKIKELGGEKMDIGWGSQIRNYVFHPYSLVKDTRTKVESA 304
Query: 424 DPDSVLEGDLDGFILSYL 441
+ +V++G LD F+ +YL
Sbjct: 305 NVQAVMDGSLDLFVNAYL 322
>gi|169826759|ref|YP_001696917.1| peptide chain release factor 2 [Lysinibacillus sphaericus C3-41]
gi|168991247|gb|ACA38787.1| Peptide chain release factor 2 (RF-2) [Lysinibacillus sphaericus
C3-41]
Length = 328
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 160/327 (48%), Positives = 211/327 (64%), Gaps = 3/327 (0%)
Query: 121 KPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDM-IKLAREENDTELELESLE 179
+P WDD A I E L + E K E E E++DM ++L REE D EL+ E +
Sbjct: 4 EPGFWDDQQGAQVIINEGNGLKAIVNEYKELE-ETHENLDMTLELLREEPDEELQEELGK 62
Query: 180 ALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGY 239
L+ ++K + EL LLSG D + +E+ GAGGTES DW SM+L+MY WA++RG+
Sbjct: 63 ELVEFQQKMADFELQLLLSGPYDQNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGF 122
Query: 240 RVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVA 299
+V MD +PG+ AGIK TI + G AFGY +AE GVHRLVRISPFDS RRHTSF +
Sbjct: 123 KVETMDYLPGDEAGIKSVTISIKGHNAFGYLQAEKGVHRLVRISPFDSSGRRHTSFVSCD 182
Query: 300 VIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQ 359
V+P D + + I DL+I+ +R+ GAGGQH NTTDSAVRI HIPTG CQ ERSQ
Sbjct: 183 VMPEF-DENIEIDIRTEDLKIDTYRATGAGGQHINTTDSAVRITHIPTGTVVQCQAERSQ 241
Query: 360 HQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTN 419
+N+ AM +L+ ++ QLE+ +Q E DI WG+QIR+YV HPY MVKD RTN
Sbjct: 242 IKNREKAMAMLKGKLYQLELEKQQAQLDEIRGEQKDIGWGSQIRSYVFHPYSMVKDHRTN 301
Query: 420 YEVSDPDSVLEGDLDGFILSYLSASLD 446
E + +V++GDLD FI +YL + ++
Sbjct: 302 EETGNVGAVMDGDLDPFINAYLRSKIN 328
>gi|260582141|ref|ZP_05849935.1| peptide chain release factor 2 [Haemophilus influenzae NT127]
gi|260094773|gb|EEW78667.1| peptide chain release factor 2 [Haemophilus influenzae NT127]
Length = 351
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 149/335 (44%), Positives = 219/335 (65%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++AEL +P++W+ P A + +E SL + +K EQ L + +++LA E D
Sbjct: 19 RLEEVNAELEQPDVWNAPDKAQTLGKERVSLEQVVNTIKNLEQGLEDVDGLLELAIEAED 78
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
+ E++ L + ++ ++ E + SGE D C CY+++QAG+GGTE+ DW M+L+MY
Sbjct: 79 EDTFHEAVAELDELEQQLEKLEFRRMFSGEHDACDCYVDLQAGSGGTEAQDWTEMLLRMY 138
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
W + +G++ LM+ G++AG+K ATIKV GEYAFG+ + E G+HRLVR SPFDS R
Sbjct: 139 LRWTESKGFKTELMEVSDGDVAGLKSATIKVSGEYAFGWLRTETGIHRLVRKSPFDSNNR 198
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSF+A V P ++IN +DLRI+ +R+ GAGGQH N T+SAVRI H+P+GI
Sbjct: 199 RHTSFSAAFVYPEID-DDIDIEINPADLRIDVYRASGAGGQHVNKTESAVRITHMPSGIV 257
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+NK AM L++++ +LE+ ++ + +DI WG+QIR+YVL
Sbjct: 258 VQCQNDRSQHKNKDQAMKQLKAKLYELELQKKNADKQAMEDNKSDIGWGSQIRSYVLDDS 317
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E + +VL+GDLD FI + L A L
Sbjct: 318 R-IKDLRTGVENRNTQAVLDGDLDRFIEASLKAGL 351
>gi|291618681|ref|YP_003521423.1| PrfB [Pantoea ananatis LMG 20103]
gi|378765872|ref|YP_005194333.1| peptide chain release factor 2 [Pantoea ananatis LMG 5342]
gi|386078133|ref|YP_005991658.1| peptide chain release factor 2 PrfB [Pantoea ananatis PA13]
gi|291153711|gb|ADD78295.1| PrfB [Pantoea ananatis LMG 20103]
gi|354987314|gb|AER31438.1| peptide chain release factor 2 PrfB [Pantoea ananatis PA13]
gi|365185346|emb|CCF08296.1| peptide chain release factor 2 [Pantoea ananatis LMG 5342]
Length = 430
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 149/335 (44%), Positives = 216/335 (64%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++AEL +P++W++P A + +E SL + Q L + ++ LA E +D
Sbjct: 98 RLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTFDQMSQGLEDVQGLLDLAVEADD 157
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
E E++ L + K E E + SGE D CYI++QAG+GGTE+ DWASM+++MY
Sbjct: 158 EETFNEAVAELDALEGKLGELEFRRMFSGEYDSADCYIDLQAGSGGTEAQDWASMLMRMY 217
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA+ +G++ +++E GE+AGIK TI+V G+YAFG+ + E GVHRLVR SPFDSG R
Sbjct: 218 LRWAEAKGFKTEIIEESEGEVAGIKSVTIRVSGDYAFGWLRTETGVHRLVRKSPFDSGGR 277
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSF++ + P + IN +DLRI+ +R+ GAGGQH N T+SAVRI H+PTG
Sbjct: 278 RHTSFSSAFIYPEVD-DDIDIDINPADLRIDVYRASGAGGQHVNRTESAVRITHVPTGTV 336
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+NK AM +++++ +LE+ ++ + +DI WG+QIR+YVL
Sbjct: 337 TQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQMLEDNKSDIGWGSQIRSYVLDDS 396
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E + +VL+GDLD FI + L A L
Sbjct: 397 R-IKDLRTGVETRNTQAVLDGDLDRFIEASLKAGL 430
>gi|415883540|ref|ZP_11545569.1| Protein chain release factor B [Bacillus methanolicus MGA3]
gi|387591335|gb|EIJ83652.1| Protein chain release factor B [Bacillus methanolicus MGA3]
Length = 327
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 152/326 (46%), Positives = 212/326 (65%), Gaps = 3/326 (0%)
Query: 121 KPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMI-KLAREENDTELELESLE 179
+P+ WDD A I E L + E E LE++++ +L +EEND EL+ E +
Sbjct: 3 QPDFWDDQQKAQAIINEANGLKDLVNEFNDM-NETLENLELTYELVKEENDAELQEELEK 61
Query: 180 ALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGY 239
L + ++ + EL LLS D + +E+ GAGGTES DW SM+L+MY WA+++G+
Sbjct: 62 ELKDLTKRVNQFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKKGF 121
Query: 240 RVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVA 299
+V +D +PGE AGIK T+ + G A+GY KAE GVHRLVRISPFD+ RRHTSF +
Sbjct: 122 KVETLDYLPGEEAGIKSVTLAIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSCE 181
Query: 300 VIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQ 359
V+P D ++I DL+I+ +RS GAGGQH NTTDSAVRI HIPTGI TCQ ERSQ
Sbjct: 182 VMPEFND-EIEIEIRPEDLKIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVTCQTERSQ 240
Query: 360 HQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTN 419
+N+ AM +L++++ Q +I Q + AE +I WG+QIR+YV HPY +VKD RTN
Sbjct: 241 IKNRERAMNMLKAKLYQKKIEEQEKELAEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300
Query: 420 YEVSDPDSVLEGDLDGFILSYLSASL 445
E+ + +V++G++D FI +YL + L
Sbjct: 301 VEIGNVQAVMDGEIDPFINAYLRSRL 326
>gi|218666919|ref|YP_002424975.1| peptide chain release factor 2, programmed frameshift
[Acidithiobacillus ferrooxidans ATCC 23270]
gi|226739123|sp|B7J4M2.1|RF2_ACIF2 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|218519132|gb|ACK79718.1| peptide chain release factor 2, programmed frameshift
[Acidithiobacillus ferrooxidans ATCC 23270]
Length = 365
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 153/336 (45%), Positives = 215/336 (63%), Gaps = 4/336 (1%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL + EL P +W++ A + RE +L + + L + +M++LA E D
Sbjct: 33 RLEEVQRELEDPTIWNNAEKAQELGRERSALEAVITPMDKLTASLADGGEMLELALSEQD 92
Query: 171 TELELESLEALLTMRRKSKEK-ELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
EL L +++A L EK E + SG D +C++++QAGAGGTE+ DWA M+L+M
Sbjct: 93 AEL-LAAVDADLDTALSLVEKLEFQRMFSGAQDAANCFVDIQAGAGGTEAQDWAEMILRM 151
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y WA+ G+ L++ GE+AGIK A+I V G++AFG+ + E GVHRLVR SPFDSG
Sbjct: 152 YLHWAESHGFAAELVEVSEGEVAGIKSASIHVRGDHAFGWLRTETGVHRLVRKSPFDSGN 211
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RRHTSFA+V V P D S V IN +DL+++ +R+ GAGGQH N TDSA+RI H+P+GI
Sbjct: 212 RRHTSFASVFVYPEI-DDSFEVDINPADLKVDTYRASGAGGQHVNKTDSAIRITHVPSGI 270
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHP 409
CQ +RSQH+N+A AM +L+S++ ++E+ ++A S +DI WG+QIR+YVL
Sbjct: 271 VVACQTDRSQHKNRAEAMRMLRSKLYEMEMQKRAVEKQALEDSKSDIGWGHQIRSYVLDQ 330
Query: 410 YRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT EV D VL+G LD FI + L A L
Sbjct: 331 SR-IKDLRTGVEVGDTQKVLDGALDMFIEAALKAGL 365
>gi|168210100|ref|ZP_02635725.1| peptide chain release factor 2 [Clostridium perfringens B str. ATCC
3626]
gi|170711768|gb|EDT23950.1| peptide chain release factor 2 [Clostridium perfringens B str. ATCC
3626]
Length = 323
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 139/325 (42%), Positives = 214/325 (65%), Gaps = 2/325 (0%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
+ + WDD A +++E + K+ + K E ++ ++++K EEND E E +
Sbjct: 1 MQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNL-NERIDDVEVLKELMEENDEETAKEII 59
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
+ + ++ +++ +LSGE D + + G GG+++ DW M+L+MY W +++G
Sbjct: 60 SEVKALSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYIRWCEKKG 119
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
Y + +D +PG+ AG+K T+KV GE+A+GY KAE G+HRLVRISPF++ +R TSFA+V
Sbjct: 120 YSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASV 179
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
V+P S ++IN DLRI+ +R+GGAGGQH N T+SAVRI HIPTGI CQNERS
Sbjct: 180 EVLPELT-SDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERS 238
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
Q N+ +AMG+L+S++ +L+ + + T L D+ WG+QIR+YV HPY MVKD RT
Sbjct: 239 QFSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKDHRT 298
Query: 419 NYEVSDPDSVLEGDLDGFILSYLSA 443
N E S+ + V++GD+D FI++YL++
Sbjct: 299 NVETSNVNGVMDGDIDNFIIAYLNS 323
>gi|256006007|ref|ZP_05430946.1| peptide chain release factor 2 [Clostridium thermocellum DSM 2360]
gi|281417086|ref|ZP_06248106.1| peptide chain release factor 2 [Clostridium thermocellum JW20]
gi|419723549|ref|ZP_14250667.1| peptide chain release factor 2 [Clostridium thermocellum AD2]
gi|419725319|ref|ZP_14252368.1| peptide chain release factor 2 [Clostridium thermocellum YS]
gi|255990030|gb|EEU00173.1| peptide chain release factor 2 [Clostridium thermocellum DSM 2360]
gi|281408488|gb|EFB38746.1| peptide chain release factor 2 [Clostridium thermocellum JW20]
gi|380771283|gb|EIC05154.1| peptide chain release factor 2 [Clostridium thermocellum YS]
gi|380780424|gb|EIC10104.1| peptide chain release factor 2 [Clostridium thermocellum AD2]
Length = 357
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 233/358 (65%), Gaps = 10/358 (2%)
Query: 103 LQWKNL------NVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELL 156
++W NL ++ L + ++P+ W+D ++ +I ++ SL K++ +
Sbjct: 1 MKWGNLFDIASIGNQIEELEQKASEPDFWNDTENSQKILQKIKSLRSKVERYNKLVSQWE 60
Query: 157 EHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGG 216
+ I + +L EE D + E++E +++ + L+ LL+G+ D + + + AGAGG
Sbjct: 61 DLITLCELGIEEQDESVIPEAVEGFKAFKKEFEALRLETLLTGQYDKNNAILTLHAGAGG 120
Query: 217 TESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGV 276
TE+ DW M+ +MY WA+++G+ V ++D + GE AGIK T +V GE A+G+ K+E GV
Sbjct: 121 TEAQDWVQMLFRMYTRWAEKKGFTVKVLDYLDGEEAGIKSVTFQVIGENAYGFLKSEKGV 180
Query: 277 HRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTT 336
HRLVRISPFD+ RRHTSFA++ V+P D V IN DLRI+ +RS GAGGQH N T
Sbjct: 181 HRLVRISPFDASGRRHTSFASLDVMPELND-DIEVHINPDDLRIDTYRSSGAGGQHINKT 239
Query: 337 DSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLT-D 395
+SAVRI HIPTGI +CQ+ERSQ QNK +AM +L++++ +L+ R+ + E + + +
Sbjct: 240 ESAVRITHIPTGIVVSCQSERSQFQNKDTAMKMLKAKLMELK-ERENKEKIEDLKGIQLE 298
Query: 396 ISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKDEGGQQ 453
I+WG+QIR+YV PY +VKD RTNYE + D+V++G+LDGFI SYLS S+ KD ++
Sbjct: 299 IAWGSQIRSYVFCPYTLVKDHRTNYEEINVDAVMDGELDGFINSYLS-SVSKDNNKEK 355
>gi|387928642|ref|ZP_10131320.1| peptide chain release factor 2 [Bacillus methanolicus PB1]
gi|387588228|gb|EIJ80550.1| peptide chain release factor 2 [Bacillus methanolicus PB1]
Length = 327
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 151/326 (46%), Positives = 210/326 (64%), Gaps = 3/326 (0%)
Query: 121 KPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMI-KLAREENDTELELESLE 179
+P+ WDD A I E L + E E LE++D+ +L +EEND EL+ E
Sbjct: 3 QPDFWDDQQKAQTIINEANGLKDLVNEFNDL-NETLENLDLTYELVKEENDAELKEELEN 61
Query: 180 ALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGY 239
L ++ + EL LL+ D + +E+ GAGGTES DW SM+L+MY WA+++G+
Sbjct: 62 ELKDFTKRVNQFELQLLLNEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKKGF 121
Query: 240 RVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVA 299
+V +D +PG+ AGIK T+ + G A+GY KAE GVHRLVRISPFD+ RRHTSF +
Sbjct: 122 KVETLDYLPGDEAGIKSVTLAIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSCE 181
Query: 300 VIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQ 359
V+P D ++I DL+I+ +RS GAGGQH NTTDSAVRI HIPTG+ TCQ ERSQ
Sbjct: 182 VMPEFND-EIEIEIRPEDLKIDTYRSSGAGGQHVNTTDSAVRITHIPTGVVVTCQTERSQ 240
Query: 360 HQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTN 419
+N+ AM +L++++ Q +I Q + AE +I WG+QIR+YV HPY +VKD RTN
Sbjct: 241 IKNRERAMNMLKAKLYQKKIEEQEKELAEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTN 300
Query: 420 YEVSDPDSVLEGDLDGFILSYLSASL 445
E+ + +V++GD+D FI +YL + L
Sbjct: 301 TEIGNVQAVMDGDIDPFINAYLRSRL 326
>gi|379795225|ref|YP_005325223.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
MSHR1132]
gi|356872215|emb|CCE58554.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
MSHR1132]
Length = 369
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 146/355 (41%), Positives = 223/355 (62%)
Query: 94 QSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQ 153
Q + I+ L +N + +++PN WD+ A I ++ +L + K +Q
Sbjct: 15 QDLTQIRGSLDLENKETNIQEYEEMMSEPNFWDNQTKAQDIIDKNNALKSIVNGYKKLQQ 74
Query: 154 ELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAG 213
++ + +L +EE D E++++ + ++ + K E EL LL G D + +E+ G
Sbjct: 75 DVDDMEATWELLQEEFDEEMKVDLEQDVIDFKAKVDEYELQLLLDGPHDANNAILELHPG 134
Query: 214 AGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAE 273
AGGTES DWA+M+ +MY+ + +++G++V +D +PG+ AGIK T+ + G A+GY KAE
Sbjct: 135 AGGTESQDWANMLFRMYQRYCEKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAE 194
Query: 274 VGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHA 333
GVHRLVRISPFDS RRHTSFA+ VIP+ + ++IN D+ ++ FR+ GAGGQH
Sbjct: 195 KGVHRLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHI 254
Query: 334 NTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSL 393
N T+SA+RI H P+GI QNERSQ +N+ +AM +L+S++ QL++ QA+ AE
Sbjct: 255 NKTESAIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQ 314
Query: 394 TDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKD 448
+I WG+QIR+YV HPY MVKD RTN E D+V++G++ FI SYL ++ D
Sbjct: 315 KEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGEIGPFIESYLRQTMSHD 369
>gi|383316952|ref|YP_005377794.1| peptide chain release factor 2 [Frateuria aurantia DSM 6220]
gi|379044056|gb|AFC86112.1| peptide chain release factor 2 [Frateuria aurantia DSM 6220]
Length = 374
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 145/361 (40%), Positives = 225/361 (62%), Gaps = 2/361 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
++ + + + + +++ L + + + RL ++ EL P++WDDP A + RE L +
Sbjct: 8 QAQISDLIERVALLRGYLDYPSKSERLEEVNRELESPSVWDDPARAQELGRERARLATIV 67
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
+ L + +++++A + D + + + + + + E + SG++D C+
Sbjct: 68 NGIDELGSGLDDAGELLEMAAADGDEDTVNAIVGDVAALEARVGKLEFQRMFSGKMDACN 127
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
+I++QAGAGGTE+ DWA M+L+MY W + RG+ L++ G++AGIK AT +V+G+Y
Sbjct: 128 AFIDIQAGAGGTEAQDWAEMLLRMYLRWCESRGWNTELLEVSGGDVAGIKSATFRVEGDY 187
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
A+G+ K E+GVHRLVR SPFDS RRHTSF +V V P D + IN +DLR + +RS
Sbjct: 188 AYGWLKTEIGVHRLVRKSPFDSDNRRHTSFTSVFVSPEV-DDDIEIDINPADLRTDVYRS 246
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQM 385
GAGGQH N T+SAVRI H+PTG+ A CQ ERSQH N+ AM +L++++ +LE+ ++
Sbjct: 247 SGAGGQHVNKTESAVRITHVPTGVVAACQTERSQHANRDRAMKMLKAKLYELEVQKRNAE 306
Query: 386 NAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
S +DI WG+QIR YVL R +KDLRT E +D VL+GDLD F+ + L + L
Sbjct: 307 KDALEASKSDIGWGSQIRNYVLDQSR-IKDLRTGIERTDTQKVLDGDLDEFVEASLKSGL 365
Query: 446 D 446
D
Sbjct: 366 D 366
>gi|189425791|ref|YP_001952968.1| hypothetical protein Glov_2735 [Geobacter lovleyi SZ]
gi|189422050|gb|ACD96448.1| hypothetical protein Glov_2735 [Geobacter lovleyi SZ]
Length = 372
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 148/358 (41%), Positives = 224/358 (62%), Gaps = 7/358 (1%)
Query: 84 DWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
D S +++ +S+ + KR + + L+ R+ P WDDP + I ++ +
Sbjct: 11 DLTSRISSLRRSLDLDSKREELQELDARIA-------APGFWDDPSGSQDILKKRTVIEK 63
Query: 144 KMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDP 203
++ + ++ + MI+L E +D + E + ++ +E E +LSG D
Sbjct: 64 LLQSWDSLNRQADDVRVMIELGEESSDEDTLTEVHQMNERLKSGVEEAEFQRMLSGTHDR 123
Query: 204 CSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDG 263
C++ V +GAGGTES DWA+M+L+M + +++G++ + D GE AG+K AT V G
Sbjct: 124 NGCFVSVNSGAGGTESQDWANMLLRMLLRYCEKKGWKAVITDYQDGEEAGLKSATFSVSG 183
Query: 264 EYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERF 323
E+A+G+ KAE GVHRLVR+SPFDS RRHTSFA+V V P + ++I +SDLR++ +
Sbjct: 184 EFAYGHLKAEAGVHRLVRLSPFDSNNRRHTSFASVFVFPEIEEEDIDIRIADSDLRVDTY 243
Query: 324 RSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQA 383
RS G+GGQH NTTDSAVRI H+PT I CQ+ERSQ N+A+AM VL++++ + E+ +
Sbjct: 244 RSSGSGGQHVNTTDSAVRITHLPTNIVVACQSERSQILNRATAMKVLRAKLYEKEMEERN 303
Query: 384 QMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
+E +I WG+QIR+YVLHPY+MVKDLRT E +PDSVL+G LD F++ +L
Sbjct: 304 AKASEIAGEKREIGWGSQIRSYVLHPYKMVKDLRTGVESGNPDSVLDGALDDFVIPFL 361
>gi|182624026|ref|ZP_02951814.1| peptide chain release factor 2 [Clostridium perfringens D str.
JGS1721]
gi|177910919|gb|EDT73273.1| peptide chain release factor 2 [Clostridium perfringens D str.
JGS1721]
Length = 323
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 138/325 (42%), Positives = 214/325 (65%), Gaps = 2/325 (0%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
+ + WDD A +++E + K+ + K E ++ ++++K EEND E E +
Sbjct: 1 MQEAGFWDDVQKAQEVTQEAKRVKDKIDKFKNL-NERIDDVEVLKELMEENDEETAKEII 59
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
+ + ++ +++ +LSGE D + + G GG+++ DW M+L+MY W +++
Sbjct: 60 SEVKALSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWCEKKE 119
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
Y + +D +PG+ AG+K T+KV GE+A+GY KAE G+HRLVRISPF++ +R TSFA+V
Sbjct: 120 YSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASV 179
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
V+P S ++IN DLRI+ +R+GGAGGQH N T+SAVRI HIPTGI CQNERS
Sbjct: 180 EVLPELT-SDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERS 238
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
Q N+ +AMG+L+S++ +L+ + + T L D+ WG+QIR+YV HPY MVKD RT
Sbjct: 239 QFSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKDHRT 298
Query: 419 NYEVSDPDSVLEGDLDGFILSYLSA 443
N+E S+ + V++GD+D FI++YL++
Sbjct: 299 NFETSNVNGVMDGDIDNFIIAYLNS 323
>gi|18311152|ref|NP_563086.1| peptide chain release factor 2 [Clostridium perfringens str. 13]
gi|18145835|dbj|BAB81876.1| peptide chain release factor 2 [Clostridium perfringens str. 13]
Length = 323
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 138/325 (42%), Positives = 214/325 (65%), Gaps = 2/325 (0%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
+ + WDD A +++E + K+ + + E ++ ++++K EEND E E +
Sbjct: 1 MQEAGFWDDVQKAQEVTQEAKRVKDKIDKFRNL-NERIDDVEVLKELMEENDEETAKEII 59
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
+ + ++ +++ +LSGE D + + G GG+++ DW M+L+MY W +++G
Sbjct: 60 SEVKALSKEIDTLKIETILSGEYDRNDAILTLHTGVGGSDANDWTEMLLRMYTRWCEKKG 119
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
Y + +D +PG+ AG+K T+KV GE+A+GY KAE G+HRLVRISPF++ +R TSFA+V
Sbjct: 120 YSLETIDYLPGDEAGVKSVTLKVKGEFAYGYLKAEKGIHRLVRISPFNANGKRQTSFASV 179
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
V+P S ++IN DLRI+ +R+GGAGGQH N T+SAVRI HIPTGI CQNERS
Sbjct: 180 EVLPELT-SDQDIEINPVDLRIDTYRAGGAGGQHVNKTESAVRITHIPTGIVVQCQNERS 238
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
Q N+ +AMG+L+S++ +L+ + + T L D+ WG+QIR+YV HPY MVKD RT
Sbjct: 239 QFSNRDTAMGMLKSKLIELKERAHKEKIEDLTGELKDMGWGSQIRSYVFHPYSMVKDHRT 298
Query: 419 NYEVSDPDSVLEGDLDGFILSYLSA 443
N E S+ + V++GD+D FI++YL++
Sbjct: 299 NVETSNVNGVMDGDIDNFIIAYLNS 323
>gi|125972886|ref|YP_001036796.1| peptide chain release factor 2 [Clostridium thermocellum ATCC
27405]
gi|125713111|gb|ABN51603.1| peptide chain release factor 2 [Clostridium thermocellum ATCC
27405]
Length = 357
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 233/358 (65%), Gaps = 10/358 (2%)
Query: 103 LQWKNL------NVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELL 156
++W NL ++ L + ++P+ W+D ++ +I ++ SL K++ +
Sbjct: 1 MKWGNLFDIASIGNQIEELEQKASEPDFWNDTENSQKILQKIKSLRSKVERYNKLVSQWE 60
Query: 157 EHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGG 216
+ I + +L EE D + E++E +++ + L+ LL+G+ D + + + AGAGG
Sbjct: 61 DLITLCELGIEEQDESVIPEAVEGFKAFKKEFEALRLETLLTGQYDKNNALLTLHAGAGG 120
Query: 217 TESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGV 276
TE+ DW M+ +MY WA+++G+ V ++D + GE AGIK T +V GE A+G+ K+E GV
Sbjct: 121 TEAQDWVQMLFRMYTRWAEKKGFTVKVLDYLDGEEAGIKSVTFQVIGENAYGFLKSEKGV 180
Query: 277 HRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTT 336
HRLVRISPFD+ RRHTSFA++ V+P D V IN DLRI+ +RS GAGGQH N T
Sbjct: 181 HRLVRISPFDASGRRHTSFASLDVMPELND-DIEVHINPDDLRIDTYRSSGAGGQHINKT 239
Query: 337 DSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLT-D 395
+SAVRI HIPTGI +CQ+ERSQ QNK +AM +L++++ +L+ R+ + E + + +
Sbjct: 240 ESAVRITHIPTGIVVSCQSERSQFQNKDTAMKMLKAKLMELK-ERENKEKIEDLKGIQLE 298
Query: 396 ISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKDEGGQQ 453
I+WG+QIR+YV PY +VKD RTNYE + D+V++G+LDGFI SYLS S+ KD ++
Sbjct: 299 IAWGSQIRSYVFCPYTLVKDHRTNYEEINVDAVMDGELDGFINSYLS-SVSKDNNKEK 355
>gi|336324934|ref|YP_004604900.1| peptide chain release factor RF-2 [Corynebacterium resistens DSM
45100]
gi|336100916|gb|AEI08736.1| peptide chain release factor RF-2 [Corynebacterium resistens DSM
45100]
Length = 378
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 160/353 (45%), Positives = 227/353 (64%), Gaps = 15/353 (4%)
Query: 95 SIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQE 154
++ I+K L + L L P+LWDDP HA +++ E + GK+++VK+ Q
Sbjct: 15 TLTTIEKVLDLEALADSARELEDRAADPSLWDDPDHAQKVTSELSRVQGKLRKVKSLRQR 74
Query: 155 LLEHIDMIKLARE----ENDTELELESL--EALLTMRRKSKEKELDALLSGELDPCSCYI 208
L + M +A E + DT E + E +R++ + E+ +LSGE D +
Sbjct: 75 LEDLPVMYDMAEEAAAEDPDTADEAMEMADEERAELRKEIESLEVTTMLSGEYDQREAVV 134
Query: 209 EVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFG 268
+++GAGG ++ DWA M+++MY WA++ G++V + D E AGIK AT V GEY +G
Sbjct: 135 NIRSGAGGVDAADWAEMLMRMYTRWAEKSGHKVDIYDISYAEEAGIKSATFVVHGEYMYG 194
Query: 269 YAKAEVGVHRLVRISPFDSG-KRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGG 327
E G HRLVR+SPF SG +R TSFA V V+P + + H+ I ++++R++ +RS G
Sbjct: 195 TLSVEQGAHRLVRLSPFGSGGDKRQTSFAEVEVLPVV-EQTDHIDIPDAEVRVDVYRSSG 253
Query: 328 AGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ---AQ 384
GGQ NTTDSAVR+ HIPTGI TCQNE+SQ QNKASAM VLQ+++ LE RQ A+
Sbjct: 254 PGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKL--LERKRQEERAE 311
Query: 385 MNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
++A + + SWGNQ+R+YVLHPY+MVKDLRTNYEV+DP VL+GDLDGF+
Sbjct: 312 LDA--LGAGGNASWGNQMRSYVLHPYQMVKDLRTNYEVNDPSKVLDGDLDGFL 362
>gi|330444184|ref|YP_004377170.1| peptide chain release factor 2 [Chlamydophila pecorum E58]
gi|328807294|gb|AEB41467.1| Peptide chain release factor 2 [Chlamydophila pecorum E58]
Length = 344
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 156/342 (45%), Positives = 215/342 (62%), Gaps = 22/342 (6%)
Query: 112 LNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDT 171
L L + + N W+D V AG+IS + +L ++ E EL + I+ I+ +N+
Sbjct: 8 LRELEKQSAQENFWEDVVKAGKISEQIAALKRQLSEYS----ELQKKIETIEFFLNDNEA 63
Query: 172 ----------ELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMD 221
E E E+ L + E LLSGE+D SC++ + AGAGGTES D
Sbjct: 64 CADPEVGKELEKEFAFCESCLAVW------ETQRLLSGEVDKNSCFLSINAGAGGTESCD 117
Query: 222 WASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVR 281
W M+ +MY WA R ++V ++D + GE+AGIK T+K+ GEYA+GYAKAE GVHRLVR
Sbjct: 118 WVEMLFRMYSRWASRHHWKVDVIDRLDGEVAGIKHITLKLTGEYAYGYAKAESGVHRLVR 177
Query: 282 ISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVR 341
ISPFDS +RHTSFA+V V P D ++I +DLRI+ FRS GAGGQH N T+SAVR
Sbjct: 178 ISPFDSNAKRHTSFASVDVFPEV-DDQIQIEILPNDLRIDTFRSSGAGGQHVNVTESAVR 236
Query: 342 IIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQ 401
I H+PTGI +CQNERSQ QN+ S M VL++R+ Q E+ + + + +I+WG+Q
Sbjct: 237 ITHLPTGIVVSCQNERSQLQNRESCMKVLRARLYQRELQERLERRLLERKDKKEIAWGSQ 296
Query: 402 IRTYVLHPYRMVKDLRTNYEVSDPDSVLEGD-LDGFILSYLS 442
IR YV PY +VKD+RT YEV + ++++G+ LD FI YL+
Sbjct: 297 IRNYVFQPYTLVKDVRTGYEVGNIQAMMDGELLDEFIKVYLA 338
>gi|83748475|ref|ZP_00945497.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Ralstonia
solanacearum UW551]
gi|207743623|ref|YP_002260015.1| peptide chain release factor 2 (rf-2) protein [Ralstonia
solanacearum IPO1609]
gi|421888789|ref|ZP_16319870.1| peptide chain release factor RF-2; programmed frameshift [Ralstonia
solanacearum K60-1]
gi|421899276|ref|ZP_16329641.1| peptide chain release factor 2 (rf-2) protein [Ralstonia
solanacearum MolK2]
gi|83724886|gb|EAP72042.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Ralstonia
solanacearum UW551]
gi|206590482|emb|CAQ37444.1| peptide chain release factor 2 (rf-2) protein [Ralstonia
solanacearum MolK2]
gi|206595022|emb|CAQ61949.1| peptide chain release factor 2 (rf-2) protein [Ralstonia
solanacearum IPO1609]
gi|378965905|emb|CCF96618.1| peptide chain release factor RF-2; programmed frameshift [Ralstonia
solanacearum K60-1]
Length = 300
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 145/293 (49%), Positives = 210/293 (71%), Gaps = 6/293 (2%)
Query: 151 FEQELLEHIDMIKLAREENDTELELESLEA-LLTMRRKSKEKELDALLSGELDPCSCYIE 209
+++L ++ +LAREE D + +E++EA MR ++ E + SG +D +C+I+
Sbjct: 8 LDEDLTGGAELFELAREEGDDDT-IEAIEADTAGMRAIVEDMEFRRMFSGPMDAANCFID 66
Query: 210 VQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGY 269
+QAGAGGTE+ DWASM+L+ Y + +R+G++ +++E G++AGIK A+IKV+GEYAFG+
Sbjct: 67 IQAGAGGTEACDWASMLLRQYLKYCERKGFKAEVLEESEGDVAGIKSASIKVEGEYAFGF 126
Query: 270 AKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAG 329
+ E GVHRLVR SPFDS RHTSF+++ V P D S +++N +DLR++ +R+ GAG
Sbjct: 127 LRTETGVHRLVRKSPFDSAGGRHTSFSSIFVYPEV-DDSIEIEVNPADLRVDTYRASGAG 185
Query: 330 GQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEH 389
GQH N TDSAVRI HIPTGI CQN+RSQH+N+A AM +L+SR+ + E+ R+ Q A+
Sbjct: 186 GQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHEL-RKRQAEADK 244
Query: 390 TQ-SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
+ S TD+ WG+QIR+YVL R +KDLRTN E+S+ VL+GDLD FI + L
Sbjct: 245 LEASKTDVGWGHQIRSYVLDQSR-IKDLRTNVEISNTQKVLDGDLDAFIQASL 296
>gi|415705167|ref|ZP_11460438.1| peptide chain release factor 2 [Gardnerella vaginalis 75712]
gi|388051889|gb|EIK74913.1| peptide chain release factor 2 [Gardnerella vaginalis 75712]
Length = 380
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 148/340 (43%), Positives = 220/340 (64%), Gaps = 2/340 (0%)
Query: 98 VIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLE 157
+I K L +L + L + ++P LWDD HA +++ + + ++K ++A EQ + +
Sbjct: 19 LISKALDVNSLKTAIADLEKQASEPGLWDDSEHAQQVTSKLSAAQSQLKRLQAVEQRIED 78
Query: 158 HIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGT 217
+I+L +EE D + E+ E L ++ + + E+ LL GE D + + +++GAGG
Sbjct: 79 TKTLIELGQEEEDADSMSEAQEELGSIAHELDDMEVQTLLDGEYDARAAVVTIRSGAGGV 138
Query: 218 ESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVH 277
++ D+A M+L+MY WA+R GY+ +MD E AGIK AT +VD YA+G E G H
Sbjct: 139 DAADFAQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTH 198
Query: 278 RLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTD 337
R+VRISPFD+ RR T F+AV VIP +++ H+ I +SD+R++ F++ G GGQ NTT
Sbjct: 199 RMVRISPFDNQGRRQTGFSAVEVIPLV-EATDHIDIPDSDIRVDTFQASGPGGQGVNTTY 257
Query: 338 SAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDIS 397
SAVRI H+PTG+ + Q+ERSQ QN+A+AM VLQSR+ L+ A +A E + S
Sbjct: 258 SAVRITHLPTGLVVSMQDERSQIQNRAAAMAVLQSRLLVLKHAEEAAKKKELAGDIK-AS 316
Query: 398 WGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
WG+Q+R+YVLHPY+MVKDLRT YE S +V +GD+DGFI
Sbjct: 317 WGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFI 356
>gi|357056769|ref|ZP_09117798.1| peptide chain release factor 2 [Clostridium clostridioforme
2_1_49FAA]
gi|355379608|gb|EHG26764.1| peptide chain release factor 2 [Clostridium clostridioforme
2_1_49FAA]
Length = 338
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 145/323 (44%), Positives = 208/323 (64%), Gaps = 1/323 (0%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
+ +P WDDP + R+ RE +L ++ +A EQ+ + MI++ EEND+ L E
Sbjct: 1 MEEPGFWDDPEQSTRMVRESKNLKDEVDTYRALEQQYEDIQVMIQMGYEENDSSLIPEIE 60
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
E L + + + LLSGE D + + + AGAGGTES DW S++ +MY WA+ +G
Sbjct: 61 EMLEQFKETLENMRMKLLLSGEYDSNNAILRLNAGAGGTESCDWCSILYRMYCRWAESKG 120
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
++ ++D + GE AGIK T+++DGE A+GY ++E GVHRLVRISPF+S +R TSF +
Sbjct: 121 FKAHVLDFLDGEEAGIKSVTVQIDGENAYGYLRSEHGVHRLVRISPFNSAGKRQTSFVSC 180
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
V+PN + +++N D+R++ +RS GAGGQH N T SA+RI H PTGI TCQNERS
Sbjct: 181 DVMPNI-EEDIDIEVNPDDIRVDTYRSSGAGGQHINKTSSAIRITHFPTGIVVTCQNERS 239
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
Q QNK AM +L++++ ++ QA A + DI WG+QIR+YVL PY MVKD RT
Sbjct: 240 QFQNKEKAMQMLKAKLLMVKQEEQAAKAAGIRGDVKDIGWGSQIRSYVLQPYTMVKDHRT 299
Query: 419 NYEVSDPDSVLEGDLDGFILSYL 441
E + D+VL+G +D FI +YL
Sbjct: 300 GEESGNVDAVLDGAIDNFISAYL 322
>gi|383772216|ref|YP_005451282.1| peptide chain release factor 2 [Bradyrhizobium sp. S23321]
gi|381360340|dbj|BAL77170.1| peptide chain release factor 2 [Bradyrhizobium sp. S23321]
Length = 322
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 156/307 (50%), Positives = 209/307 (68%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
+E SL + + EQEL + I MI+L E DT + E+ AL ++++ +EL+A
Sbjct: 2 QERTSLEDSLSGIGKVEQELEDDIGMIELGEAEGDTGVVAEAEAALKALKKEVARRELEA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+EV AGAGGTES DWA M+L+MY WA+ G++V ++E GE AGIK
Sbjct: 62 LLSGEADRFDSYLEVHAGAGGTESQDWAQMLLRMYTRWAETHGFKVEFLEESEGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI+V G A+G+ K E GVHRLVRISPFDS RRHTSF++V V P D S + I E
Sbjct: 122 SATIQVSGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQVFPVI-DDSIKIDIKE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD+R++ RSGGAGGQH N T+SAVR+ HIPTG+ CQ RSQH+NKA A +L++R+
Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNKAQAWDMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
++E+ ++ + A + TDI WG+QIR+YVL PY+MVKDLRT + SD VL G+LD
Sbjct: 241 EIELKKREEKAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTAGVLNGELDD 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMAATLA 307
>gi|251799706|ref|YP_003014437.1| hypothetical protein Pjdr2_5745 [Paenibacillus sp. JDR-2]
gi|247547332|gb|ACT04351.1| hypothetical protein Pjdr2_5745 [Paenibacillus sp. JDR-2]
Length = 368
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 153/364 (42%), Positives = 222/364 (60%), Gaps = 8/364 (2%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNL-------LSAELNKPNLWDDPVHAGRISREHGSLMGK 144
+ Q ++ + KRLQ ++ L+L ++ P+ WDD A I E ++
Sbjct: 6 VKQDLREVAKRLQELRGSLDLDLKLEHIANFEEKMTAPDFWDDNTKAQGIISELNAIKSV 65
Query: 145 MKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPC 204
++ + + + +I+LA EE+D LE E + + ++ K EL LL+ D
Sbjct: 66 VEHYERLNADCEDLQTLIELADEESDDSLEAEVIGGIASLNEKVNGFELQLLLNQPYDKL 125
Query: 205 SCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGE 264
+ +E+ GAGGTES DWA M+ +MY WA++RG++V ++D + G+ AGIK TI V G
Sbjct: 126 NAILELHPGAGGTESQDWAQMLYRMYTRWAEKRGFKVEVLDYLDGDEAGIKSVTIAVKGY 185
Query: 265 YAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFR 324
A+GY KAE GVHRLVRISPFDS RRHTSF + V+P + V+I DL+++ +R
Sbjct: 186 NAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCDVVPEITE-DIEVEIRTEDLKVDTYR 244
Query: 325 SGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQ 384
+ GAGGQH N T+SA+RI HIPTGI CQ ERSQ QN+ AM +L+S++ + +I Q +
Sbjct: 245 ASGAGGQHVNKTESAIRITHIPTGIVVACQQERSQIQNRERAMNMLRSKLYERKIEEQQK 304
Query: 385 MNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSAS 444
AE +DI+WG+QIR+YV HPY MVKD RT+ E + +V++GDLD FI YL +
Sbjct: 305 HLAEIRGEQSDIAWGSQIRSYVFHPYSMVKDHRTSVETGNVGAVMDGDLDAFIDGYLRSQ 364
Query: 445 LDKD 448
+ D
Sbjct: 365 IRHD 368
>gi|393769300|ref|ZP_10357824.1| peptide chain release factor 2 [Methylobacterium sp. GXF4]
gi|392725199|gb|EIZ82540.1| peptide chain release factor 2 [Methylobacterium sp. GXF4]
Length = 321
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 147/307 (47%), Positives = 207/307 (67%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + ++ E++L + +I+L E D E A+L + +++ ++++
Sbjct: 2 RERQQLDEAVTSIRKLERDLEDGATLIELGEMEGDEASIREGEAAILAVEKEAASRQVET 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+EV AGAGGTES DWA+M+ +MY WA+RR Y+V +++ GE AGIK
Sbjct: 62 LLSGEADAFDTYLEVHAGAGGTESQDWANMLQRMYARWAERRKYKVEIVEWSDGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
AT+ + G A+G+ K E GVHRLVRISP+DS RRHTSFA+V V P D ++I E
Sbjct: 122 GATLLIKGHNAYGWLKTESGVHRLVRISPYDSSARRHTSFASVWVYPVI-DDRIEIEIKE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD RI+ +RS GAGGQH NTTDSAVRI H PTGI CQ ERSQH+N+A+A +L++R+
Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAVRITHNPTGIVVACQQERSQHKNRATAWNMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ ++ + + TDI WG+QIR+YVL PY++VKDLRT + +DPD+VL+G LD
Sbjct: 241 EAELKKREEKANAEAAAKTDIGWGHQIRSYVLQPYQLVKDLRTGTQSTDPDAVLDGALDP 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMEASLA 307
>gi|126652452|ref|ZP_01724624.1| peptide chain release factor 2 [Bacillus sp. B14905]
gi|126590723|gb|EAZ84838.1| peptide chain release factor 2 [Bacillus sp. B14905]
Length = 328
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 159/327 (48%), Positives = 212/327 (64%), Gaps = 3/327 (0%)
Query: 121 KPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDM-IKLAREENDTELELESLE 179
+P WDD A I E L + E K E E+ E++DM ++L REE D EL+ E +
Sbjct: 4 EPGFWDDQQGAQVIINEGNGLKAIVNEYKELE-EIHENLDMTLELLREEPDEELQEELGK 62
Query: 180 ALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGY 239
L+ ++K + EL LLSG D + +E+ GAGGTES DW SM+L+MY WA++RG+
Sbjct: 63 ELVEFQQKMADFELQLLLSGPYDQNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKRGF 122
Query: 240 RVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVA 299
+V MD +PG+ AGIK TI + G AFGY +AE GVHRLVRISPFDS RRHTSF +
Sbjct: 123 KVETMDYLPGDEAGIKSVTISIKGHNAFGYLQAEKGVHRLVRISPFDSSGRRHTSFVSCD 182
Query: 300 VIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQ 359
V+P D + + I DL+I+ +R+ GAGGQH NTTDSAVRI HIPTG CQ ERSQ
Sbjct: 183 VMPEF-DENIEIDIRTEDLKIDTYRATGAGGQHINTTDSAVRITHIPTGTVVQCQAERSQ 241
Query: 360 HQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTN 419
+N+ AM +L+ ++ QLE+ +Q E DI WG+QIR+YV HPY MVKD RTN
Sbjct: 242 IKNREKAMAMLKGKLYQLELEKQQAQLDEIRGEQKDIGWGSQIRSYVFHPYSMVKDHRTN 301
Query: 420 YEVSDPDSVLEGDLDGFILSYLSASLD 446
E + +V++GD+D FI +YL + ++
Sbjct: 302 EETGNVGAVMDGDVDPFINAYLRSRIN 328
>gi|445461523|ref|ZP_21448782.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC047]
gi|444771247|gb|ELW95378.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC047]
Length = 328
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 151/329 (45%), Positives = 214/329 (65%), Gaps = 4/329 (1%)
Query: 118 ELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELES 177
EL P +W+D A +++E G L + + +L + M+ LA E +D L LE
Sbjct: 3 ELEDPAIWNDQNRAQAMAKEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESL-LED 61
Query: 178 LEALLTMRRKSKEK-ELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQR 236
+++ L+ + K E + S +DP CY+E+QAG+GGTE+ DWASM+L+MY W +R
Sbjct: 62 VQSELSTAEEELAKLEFRRMFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIER 121
Query: 237 RGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFA 296
G++ LM+ G++AGIK ATI+V+GEYA+G+ + E GVHRLVR SPFDSG RRHTSF+
Sbjct: 122 HGFKAELMEVSDGDVAGIKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFS 181
Query: 297 AVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNE 356
AV + P D + + IN SD+R + +R+ GAGGQH N TDSAVR+ HIPTGI CQN+
Sbjct: 182 AVFISPEV-DDNIEIDINPSDVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIVVACQNQ 240
Query: 357 RSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDL 416
RSQH N+ A L++++ +LE+ ++ + S +DI WG+QIR+YVL R +KDL
Sbjct: 241 RSQHANRDHAWKQLRAKLYELEMQKRNEAAQALEDSKSDIGWGSQIRSYVLDDSR-IKDL 299
Query: 417 RTNYEVSDPDSVLEGDLDGFILSYLSASL 445
RT E S+ +VL+GDLD FI + L L
Sbjct: 300 RTGVENSNTGAVLDGDLDRFIEASLKQGL 328
>gi|300781808|ref|YP_003778203.1| hypothetical protein PSPTO_1500 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|290758052|gb|ADD53002.1| protein of unknown function [Pseudomonas syringae pv. tomato str.
DC3000]
Length = 293
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 145/292 (49%), Positives = 206/292 (70%), Gaps = 4/292 (1%)
Query: 155 LLEHIDMIKLAREENDTELELESLEALLTMRRKSKEK-ELDALLSGELDPCSCYIEVQAG 213
L++ D++ ++ EE D + ++ + A + R S EK E + SGE+DP + Y+++QAG
Sbjct: 5 LVDAKDLLLMSAEEED-QAAVDDVAAEVERLRASLEKLEFRRMFSGEMDPNNAYLDIQAG 63
Query: 214 AGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAE 273
+GGTE+ DWA+++L+MY WA +RG+ T+M+ GE+AGIK AT+ + GEYAFG+ + E
Sbjct: 64 SGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTE 123
Query: 274 VGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHA 333
+GVHRLVR SPFDSG RRHTSF+AV V P D + + IN SDLRI+ +RS GAGGQH
Sbjct: 124 IGVHRLVRKSPFDSGNRRHTSFSAVFVSPEI-DDNIEIDINPSDLRIDTYRSSGAGGQHV 182
Query: 334 NTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSL 393
NTTDSAVRI H+PT +CQNERSQH NK +AM +L++R+ + E+ ++ + +
Sbjct: 183 NTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDTK 242
Query: 394 TDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+DI WG+QIR+YVL R +KDLRTN E SD D VL+GD+D ++++ L L
Sbjct: 243 SDIGWGHQIRSYVLDASR-IKDLRTNIERSDCDKVLDGDIDEYLIASLKQGL 293
>gi|395766634|ref|ZP_10447173.1| peptide chain release factor 2 [Bartonella doshiae NCTC 12862]
gi|395415758|gb|EJF82185.1| peptide chain release factor 2 [Bartonella doshiae NCTC 12862]
Length = 322
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 148/307 (48%), Positives = 213/307 (69%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + +++F + L E I++I + EE+D E+ ++ ++ ++ + ++++D
Sbjct: 3 RERQRLDDSINGIQSFTKTLEECIELITMGEEESDIEIINDAENSIRNLKSEIDKRQIDV 62
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE DP Y+EV AGAGGTES DWASM+L+MY WA++ +V +++ GE AGIK
Sbjct: 63 LLSGEADPNDTYLEVHAGAGGTESQDWASMLLRMYTRWAEQHKMKVEILEIHDGEEAGIK 122
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI + G A+G K E GVHRLVRISPFDS +RHTSFA++ V P D + V ++E
Sbjct: 123 SATILIRGHNAYGMLKTESGVHRLVRISPFDSNAKRHTSFASIWVYP-VIDDNIEVAVSE 181
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
+D+RI+ +R+ GAGGQH NTTDSAVRI HI TGI CQ ERSQH+N+A+A ++++R+
Sbjct: 182 ADVRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQMERSQHKNRATAWSMMRARLY 241
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ ++ + S T+I WG+QIR+YVL PY++VKDLRT+ E +DP SVL GDLD
Sbjct: 242 EEELKKREEETNAIEASKTEIGWGHQIRSYVLQPYQLVKDLRTSVENTDPQSVLNGDLDA 301
Query: 436 FILSYLS 442
FI + L+
Sbjct: 302 FIEAALA 308
>gi|402849443|ref|ZP_10897676.1| peptide chain release factor 2 [Rhodovulum sp. PH10]
gi|402500263|gb|EJW11942.1| peptide chain release factor 2 [Rhodovulum sp. PH10]
Length = 322
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 147/307 (47%), Positives = 211/307 (68%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
+E L ++ + EQ+L +++ +I+L END + E+ +L ++ + ++L+A
Sbjct: 2 QERTGLEDSLEAIGRIEQDLDDNVGLIELGEAENDASVVAEAEASLDKLKAEVARRQLEA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE DP ++EV AGAGGTES DWA+M+L+MY WA++ GY++ ++E GE AGIK
Sbjct: 62 LLSGEADPNDTFLEVHAGAGGTESQDWAAMLLRMYTRWAEQHGYKIEYLEETEGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI++ G A+G+ K E GVHRLVRISPFDS RR TSFA+V V P D + I E
Sbjct: 122 SATIQIKGHNAYGWLKTERGVHRLVRISPFDSNARRQTSFASVDVYPVVDDRIV-IDIKE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD+R + RSGGAGGQH N T+SAVR+ HIP+G+ CQ ERSQH+N+A+A +L++R+
Sbjct: 181 SDVRTDTMRSGGAGGQHVNKTESAVRLTHIPSGVAVVCQAERSQHKNRATAWNMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
++E+ ++ ++ TDI WG+QIR+YVL PY+MVKDLRT + SD VL+GDLD
Sbjct: 241 EIELKKREAAATAEFEAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTGGVLDGDLDP 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMEATLA 307
>gi|395784224|ref|ZP_10464063.1| peptide chain release factor 2 [Bartonella melophagi K-2C]
gi|395423979|gb|EJF90167.1| peptide chain release factor 2 [Bartonella melophagi K-2C]
Length = 320
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 153/315 (48%), Positives = 215/315 (68%), Gaps = 3/315 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + ++ F Q L E I +I + EE+D E+ ++ + ++ + ++++D
Sbjct: 3 RERQCLEDSINGIRLFTQILEECIQLIAMGEEESDEEIITDAENTIRKLKSEIDKRQIDL 62
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+E+ AGAGGTES DWASM+L+MY WA++ +V +++ GE AGIK
Sbjct: 63 LLSGEADSNDTYLEIHAGAGGTESQDWASMLLRMYVRWAEQHKMKVEVLEIHDGEEAGIK 122
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI + G A+G K E GVHRLVRISPFDS RRHTSFA+V V + D + + I+E
Sbjct: 123 SATILIKGHNAYGMLKTESGVHRLVRISPFDSNARRHTSFASVWVY-SVVDDNIEIDISE 181
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD+RI+ +R+ GAGGQH NTTDSAVRI HI TGI CQ ERSQH+N+A+A +L++R++
Sbjct: 182 SDIRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQVERSQHKNRATAWSMLRARLH 241
Query: 376 QLEI-ARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLD 434
+ E+ R+A+ NA S T+I WG+QIR+YVL PY++VKDLRT E +DP +VL G+LD
Sbjct: 242 EEELKKREAETNAIEA-SKTEIGWGHQIRSYVLQPYQLVKDLRTGVENTDPQTVLNGNLD 300
Query: 435 GFILSYLSASLDKDE 449
FI + L+ + K +
Sbjct: 301 AFIEAALAQRVYKQD 315
>gi|301384023|ref|ZP_07232441.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
syringae pv. tomato Max13]
gi|302058729|ref|ZP_07250270.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
syringae pv. tomato K40]
gi|422297451|ref|ZP_16385086.1| hypothetical protein Pav631_1438 [Pseudomonas avellanae BPIC 631]
gi|422657724|ref|ZP_16720163.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
syringae pv. lachrymans str. M302278]
gi|331016328|gb|EGH96384.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
syringae pv. lachrymans str. M302278]
gi|407991143|gb|EKG33067.1| hypothetical protein Pav631_1438 [Pseudomonas avellanae BPIC 631]
Length = 304
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 145/292 (49%), Positives = 206/292 (70%), Gaps = 4/292 (1%)
Query: 155 LLEHIDMIKLAREENDTELELESLEALLTMRRKSKEK-ELDALLSGELDPCSCYIEVQAG 213
L++ D++ ++ EE D + ++ + A + R S EK E + SGE+DP + Y+++QAG
Sbjct: 16 LVDAKDLLLMSAEEED-QAAVDDVAAEVERLRASLEKLEFRRMFSGEMDPNNAYLDIQAG 74
Query: 214 AGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAE 273
+GGTE+ DWA+++L+MY WA +RG+ T+M+ GE+AGIK AT+ + GEYAFG+ + E
Sbjct: 75 SGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTE 134
Query: 274 VGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHA 333
+GVHRLVR SPFDSG RRHTSF+AV V P D + + IN SDLRI+ +RS GAGGQH
Sbjct: 135 IGVHRLVRKSPFDSGNRRHTSFSAVFVSPEI-DDNIEIDINPSDLRIDTYRSSGAGGQHV 193
Query: 334 NTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSL 393
NTTDSAVRI H+PT +CQNERSQH NK +AM +L++R+ + E+ ++ + +
Sbjct: 194 NTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDTK 253
Query: 394 TDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+DI WG+QIR+YVL R +KDLRTN E SD D VL+GD+D ++++ L L
Sbjct: 254 SDIGWGHQIRSYVLDASR-IKDLRTNIERSDCDKVLDGDIDEYLIASLKQGL 304
>gi|297539161|ref|YP_003674930.1| peptide chain release factor 2 [Methylotenera versatilis 301]
gi|297258508|gb|ADI30353.1| peptide chain release factor 2 [Methylotenera versatilis 301]
Length = 351
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 146/327 (44%), Positives = 213/327 (65%), Gaps = 2/327 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++ L P +WDD + + +E +L + ++A E L + ++ ++AREEND
Sbjct: 19 RLEEVNGLLEDPKVWDDNKKSQALGKEKRALELVVHSLQAVESSLNDSRELFEMAREEND 78
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
+ L + ++ E E + SGELD +C+IE Q+G+GGTE+ DWA+M+L+MY
Sbjct: 79 DDTLLSVDVDSQAVEKQVAEMEFRRMFSGELDSNNCFIEFQSGSGGTEAQDWAAMLLRMY 138
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
+ +R+G++V +++E G++AGIK A+IKV G+YA+G + E GVHRLVR SPFDS +
Sbjct: 139 LRYCERKGFKVEVLEESDGDVAGIKGASIKVTGDYAYGTLRTENGVHRLVRKSPFDSNAK 198
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSFA+V + P D S + IN +DLRI+ +R+ GAGGQH N TDSAVRI H+PT
Sbjct: 199 RHTSFASVQIFPEV-DDSIQIDINPADLRIDTYRASGAGGQHINKTDSAVRITHLPTNTV 257
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+N+ AM +L+ + LE+ ++ + TDI WG+QIR+YVL
Sbjct: 258 VQCQNDRSQHRNRDEAMNMLKGALYNLELNKRNADKQALEDAKTDIGWGHQIRSYVLDQG 317
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFI 437
R +KDLRTN E+ + VL+GDLD FI
Sbjct: 318 R-IKDLRTNVEIGNTQGVLDGDLDPFI 343
>gi|315641246|ref|ZP_07896323.1| peptide chain release factor RF2 [Enterococcus italicus DSM 15952]
gi|315483013|gb|EFU73532.1| peptide chain release factor RF2 [Enterococcus italicus DSM 15952]
Length = 340
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 150/329 (45%), Positives = 209/329 (63%), Gaps = 1/329 (0%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
+ +P WDD A ++ E+ S + EL E ++++ +EE D E+E E
Sbjct: 12 MAEPGFWDDTQSAQKVINENNSNKEAFDQFHELADELEELEVLLEMIQEEPDDEMEQELA 71
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
+ K EL LL G D + IE+ GAGGTES DW SM+L+MY+ WA +RG
Sbjct: 72 TRASELLGKMSAYELAMLLDGPYDHNNAIIELHPGAGGTESQDWGSMLLRMYQRWADKRG 131
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
++V +D +PG+ AGIK T+ + G AFGY K+E GVHRLVRISPFDS RRHTSF +V
Sbjct: 132 FQVETLDYLPGDEAGIKSVTLLIKGRNAFGYLKSEKGVHRLVRISPFDSANRRHTSFCSV 191
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
V+P D + ++IN DL+I+ +R+ GAGGQH N T+SAVRI HIPTG Q +RS
Sbjct: 192 DVMPEL-DDTIDIEINSDDLKIDTYRASGAGGQHINKTESAVRITHIPTGTVVASQAQRS 250
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
Q +N+ AMG+L++++ QLE+ +Q Q A +I WG+QIR+YV HPY MVKD RT
Sbjct: 251 QLKNREQAMGMLKAKLYQLEVEKQEQEAAALRGEQMEIGWGSQIRSYVFHPYSMVKDHRT 310
Query: 419 NYEVSDPDSVLEGDLDGFILSYLSASLDK 447
N+E + +V++GD+DGFI +YL L++
Sbjct: 311 NFETGNVQAVMDGDIDGFIDAYLKQKLNR 339
>gi|395787813|ref|ZP_10467405.1| peptide chain release factor 2 [Bartonella birtlesii LL-WM9]
gi|395410435|gb|EJF76990.1| peptide chain release factor 2 [Bartonella birtlesii LL-WM9]
Length = 322
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 148/312 (47%), Positives = 214/312 (68%), Gaps = 1/312 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + +++F + L E I +I + EE+D E+ ++ + ++ + +++++D
Sbjct: 3 RERQRLDDSIHSIRSFTKTLEECIALIAMGEEESDIEVITDAENTIHHLKSEIEKRQIDV 62
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE+DP Y+EV AGAGGTES DWASM+L+MY WA++ +V +++ GE AGIK
Sbjct: 63 LLSGEVDPNDTYLEVHAGAGGTESQDWASMLLRMYTRWAEQHKMKVEILEIHDGEEAGIK 122
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI + G A+G K E GVHRLVRISPFDS +RHTSFA++ + P D + V ++E
Sbjct: 123 SATILIKGHNAYGMLKTESGVHRLVRISPFDSNAKRHTSFASIWIYP-VIDDNIEVDVSE 181
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
+D+RI+ +R+ GAGGQH NTTDSAVRI HI TGI CQ ERSQH+N+A+A +L++R+
Sbjct: 182 ADVRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNRATAWSMLRARLY 241
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ ++ + S T+I WG+QIR+YVL PY++VKDLRT E +DP SVL G+LD
Sbjct: 242 EEELKKREEETNTIEASKTEIGWGHQIRSYVLQPYQLVKDLRTGVENTDPQSVLNGNLDS 301
Query: 436 FILSYLSASLDK 447
FI + L+ + K
Sbjct: 302 FIEAALARRIYK 313
>gi|308235215|ref|ZP_07665952.1| peptide chain release factor 2 [Gardnerella vaginalis ATCC 14018 =
JCM 11026]
gi|311114816|ref|YP_003986037.1| peptide chain release factor RF2 [Gardnerella vaginalis ATCC 14019]
gi|415711540|ref|ZP_11464277.1| peptide chain release factor 2 [Gardnerella vaginalis 55152]
gi|417556586|ref|ZP_12207643.1| peptide chain release factor 2 [Gardnerella vaginalis 315-A]
gi|310946310|gb|ADP39014.1| peptide chain release factor RF2 [Gardnerella vaginalis ATCC 14019]
gi|333602274|gb|EGL13704.1| peptide chain release factor 2 [Gardnerella vaginalis 315-A]
gi|388058374|gb|EIK81171.1| peptide chain release factor 2 [Gardnerella vaginalis 55152]
Length = 380
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 148/340 (43%), Positives = 220/340 (64%), Gaps = 2/340 (0%)
Query: 98 VIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLE 157
+I K L +L + L + ++P LWDD HA +++ + + ++K ++A EQ + +
Sbjct: 19 LISKALDVNSLKTAIADLEKQASEPGLWDDSDHAQQVTSKLSAAQSQLKRLQAVEQRIED 78
Query: 158 HIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGT 217
+I+L +EE D + E+ E L ++ + + E+ LL GE D + + +++GAGG
Sbjct: 79 TKTLIELGQEEEDADSMSEAQEELGSIAHELDDMEVQTLLDGEYDARAAVVTIRSGAGGV 138
Query: 218 ESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVH 277
++ D+A M+L+MY WA+R GY+ +MD E AGIK AT +VD YA+G E G H
Sbjct: 139 DAADFAQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTH 198
Query: 278 RLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTD 337
R+VRISPFD+ RR T F+AV VIP +++ H+ I +SD+R++ F++ G GGQ NTT
Sbjct: 199 RMVRISPFDNQGRRQTGFSAVEVIPLV-EATDHIDIPDSDIRVDTFQASGPGGQGVNTTY 257
Query: 338 SAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDIS 397
SAVRI H+PTG+ + Q+ERSQ QN+A+AM VLQSR+ L+ A +A E + S
Sbjct: 258 SAVRITHLPTGLVVSMQDERSQIQNRAAAMAVLQSRLLVLKHAEEAAKKKELAGDIK-AS 316
Query: 398 WGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
WG+Q+R+YVLHPY+MVKDLRT YE S +V +GD+DGFI
Sbjct: 317 WGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFI 356
>gi|407783481|ref|ZP_11130681.1| protein chain release factor B [Oceanibaculum indicum P24]
gi|407201606|gb|EKE71604.1| protein chain release factor B [Oceanibaculum indicum P24]
Length = 287
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 141/283 (49%), Positives = 200/283 (70%), Gaps = 1/283 (0%)
Query: 168 ENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVL 227
E+D ++ E+ +AL +R + +K+L++LLSGE D CY+EV AGAGGTE+ DWA M+
Sbjct: 2 EDDQDVVAEAEKALQRLREMAAKKQLESLLSGEADGNDCYLEVHAGAGGTEAQDWALMLS 61
Query: 228 QMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDS 287
+MY WA++ Y+V ++E GE AG+K AT+K+ G A+G+ K E GVHRLVRISPFDS
Sbjct: 62 RMYTRWAEQHDYKVEWLEESAGEEAGLKSATLKITGPNAYGWLKHESGVHRLVRISPFDS 121
Query: 288 GKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPT 347
RRHTSF++V V P D V+ E DLRI+ +R+ GAGGQH N TDSA+RI HIPT
Sbjct: 122 QARRHTSFSSVWVYPVV-DDEIEVEYQEKDLRIDTYRASGAGGQHVNKTDSAIRITHIPT 180
Query: 348 GITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVL 407
GI CQ++RSQH+N+A+A +L++R+ +LE+ ++ + + TDI WG+QIR+YVL
Sbjct: 181 GIVVQCQSDRSQHKNRATAFSMLKARLYELELQKREEAAQAQEDAKTDIGWGHQIRSYVL 240
Query: 408 HPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKDEG 450
PY+MVKDLRT E + +VL+GD+D F+ + L++ L + G
Sbjct: 241 QPYQMVKDLRTGVETGNSGAVLDGDIDRFLEASLASKLGEGSG 283
>gi|402833858|ref|ZP_10882467.1| peptide chain release factor 2 [Selenomonas sp. CM52]
gi|402279588|gb|EJU28372.1| peptide chain release factor 2 [Selenomonas sp. CM52]
Length = 371
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 147/332 (44%), Positives = 215/332 (64%), Gaps = 7/332 (2%)
Query: 115 LSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELE 174
L ++ +P WD+ A +I++E ++ G + + K + + ++++A EENDT LE
Sbjct: 38 LEYKMGEPTFWDNAEEAQKINQELAAIKGSVDKYKEIVSKTDDAQALLEMALEENDTSLE 97
Query: 175 LESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWA 234
E T++ +E EL+ LLSG D + + + AGAGGTE+ DW M+L+MY WA
Sbjct: 98 PEVQAEFETIKTAVRELELEVLLSGPYDANNAILTLHAGAGGTEAQDWTQMLLRMYGRWA 157
Query: 235 QRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTS 294
+R G+ V D +PG+ AG+K AT+ ++G A+GY K+E GVHRLVRISPFDS RRHTS
Sbjct: 158 ERHGFSVVTADLLPGDEAGVKSATLFINGHNAYGYLKSEKGVHRLVRISPFDSNARRHTS 217
Query: 295 FAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQ 354
F+A ++P D + V IN +D+R++ +R+ GAGGQH N T SAVR+ H+PTGI CQ
Sbjct: 218 FSACDIMPEI-DDAVEVAINMADVRVDTYRASGAGGQHINKTSSAVRMTHMPTGIVVQCQ 276
Query: 355 NERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTD---ISWGNQIRTYVLHPYR 411
NERSQ QN+ M +L++++ +LE Q + AE + D I WG+QIR+YV PY
Sbjct: 277 NERSQLQNREQCMKMLRAKLFELE---QEKKEAEIQKLEGDQQKIEWGSQIRSYVFQPYT 333
Query: 412 MVKDLRTNYEVSDPDSVLEGDLDGFILSYLSA 443
MVKD+RT E + +V++GDLD FI ++L+A
Sbjct: 334 MVKDMRTGMETGNVQAVMDGDLDAFIEAFLAA 365
>gi|163852399|ref|YP_001640442.1| peptide chain release factor 2 [Methylobacterium extorquens PA1]
gi|218531158|ref|YP_002421974.1| peptide chain release factor 2 [Methylobacterium extorquens CM4]
gi|240139734|ref|YP_002964211.1| peptide chain release factor RF-2 [Methylobacterium extorquens AM1]
gi|254562146|ref|YP_003069241.1| peptide chain release factor RF-2 [Methylobacterium extorquens DM4]
gi|163664004|gb|ABY31371.1| peptide chain release factor 2 [Methylobacterium extorquens PA1]
gi|218523461|gb|ACK84046.1| peptide chain release factor 2 [Methylobacterium extorquens CM4]
gi|240009708|gb|ACS40934.1| peptide chain release factor RF-2 [Methylobacterium extorquens AM1]
gi|254269424|emb|CAX25390.1| peptide chain release factor RF-2 [Methylobacterium extorquens DM4]
Length = 321
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 151/308 (49%), Positives = 208/308 (67%), Gaps = 3/308 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + +K E++L + +I+L E D E + + +++ ++++
Sbjct: 2 RERQELDEAVTAIKKLERDLEDGATLIELGEMEGDQASISEGEATIKAVEKEAASRQVET 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+EV AGAGGTES DWA+M+ +MY WA+RR ++V +++ GE AGIK
Sbjct: 62 LLSGEADGFDTYLEVHAGAGGTESQDWANMLQRMYARWAERRKFKVEIVEMTDGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
AT+ + G A+G+ K E GVHRLVRISP+DS RRHTSFA+V V P D ++I E
Sbjct: 122 GATLLIKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFASVWVYPVV-DDRIEIEIKE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD RI+ +RS GAGGQH NTTDSAVRI H PTGI CQ ERSQH+N+A+A +L++R+
Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAVRITHNPTGIVVACQQERSQHKNRATAWNMLRARLY 240
Query: 376 QLEI-ARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLD 434
+ E+ R+ + NAE S TDI WG+QIR+YVL PY++VKDLRT + +DPD VL+GDLD
Sbjct: 241 EAELKKREEKANAE-AASKTDIGWGHQIRSYVLQPYQLVKDLRTGTQSTDPDEVLDGDLD 299
Query: 435 GFILSYLS 442
F+ + L+
Sbjct: 300 PFMEASLA 307
>gi|83589099|ref|YP_429108.1| peptide chain release factor 2 [Moorella thermoacetica ATCC 39073]
gi|83572013|gb|ABC18565.1| bacterial peptide chain release factor 2 (bRF-2) [Moorella
thermoacetica ATCC 39073]
Length = 330
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 152/320 (47%), Positives = 205/320 (64%), Gaps = 1/320 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
P W+D A + + L K+ + E + + ++ +LA E+D LE E L
Sbjct: 4 PGFWEDRARAEAVGKRLTYLKEKLARYRELESKCADVRELWQLALAEDDHSLEEEIARDL 63
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
+ K + + L LL+G D + + + GAGGTES DWA+M+L+MY W + RGY+V
Sbjct: 64 AAVEGKVEGQLLATLLNGPYDRHNAILSLHPGAGGTESQDWAAMLLRMYNRWCEDRGYQV 123
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
L+D + GE AG+K ATI V GE A+GY +AE GVHRLVRISPFD+ RRHTSFA+V VI
Sbjct: 124 ELLDYLEGEEAGLKSATILVKGENAYGYLQAEKGVHRLVRISPFDAAGRRHTSFASVDVI 183
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P ++ V+IN DL+I+ FRS GAGGQH N TDSAVRI H+PTGI TCQNERSQH
Sbjct: 184 PEV-EADEEVEINPDDLKIDTFRSQGAGGQHVNKTDSAVRITHLPTGIVVTCQNERSQHA 242
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
N+ SAM +LQ+R+ L+ Q A+ +I+WG+QIR+YV HPY +VKD RT E
Sbjct: 243 NRLSAMKILQARLAALKRQEQEAELAQIRGEQREIAWGSQIRSYVFHPYSLVKDHRTGVE 302
Query: 422 VSDPDSVLEGDLDGFILSYL 441
+ +V++G +D FI +YL
Sbjct: 303 TGNIQAVMDGQIDPFIQAYL 322
>gi|212702489|ref|ZP_03310617.1| hypothetical protein DESPIG_00506 [Desulfovibrio piger ATCC 29098]
gi|212674150|gb|EEB34633.1| peptide chain release factor 2 [Desulfovibrio piger ATCC 29098]
Length = 366
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 157/340 (46%), Positives = 215/340 (63%), Gaps = 19/340 (5%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDM---IKLARE 167
RL + EL++PN WD+P + RE L ++ + A + H DM ++LA E
Sbjct: 29 RLAAIETELSRPNAWDNPEALTPLLREKRQLEDEVARLNALKTC---HDDMHEWLELAVE 85
Query: 168 ENDTEL------ELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMD 221
+ E + +SL+ALL E EL LLSGE D +E+ GAGGTES D
Sbjct: 86 SGEDEALESLAKQQDSLDALL------DETELVMLLSGEEDNQDAILEIHPGAGGTESQD 139
Query: 222 WASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVR 281
WA M+L+MY WA RR + V +D +PG+ AGIK T+++ G +AFG+ K+E G+HRL+R
Sbjct: 140 WAEMLLRMYTRWAARRHFTVEELDYLPGDEAGIKSVTLRISGPHAFGFLKSERGIHRLIR 199
Query: 282 ISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVR 341
ISPFD+ RRHTSFA+V V+P+ GD + I E+DLR + FRS G GGQ NTT SAVR
Sbjct: 200 ISPFDASGRRHTSFASVDVMPDVGD-DIQLDIKETDLRFDTFRSSGPGGQSVNTTSSAVR 258
Query: 342 IIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQ 401
+ HIPTGI+A CQNE+SQH NK +A+ +L++R+ LE+ ++ A I++G+Q
Sbjct: 259 VTHIPTGISAQCQNEKSQHHNKEAALCILKARLYNLELQKREAERAAQYAGKDAIAFGSQ 318
Query: 402 IRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
IRTY L PYR+VKD RTN E D ++VL+G +D F YL
Sbjct: 319 IRTYTLQPYRLVKDHRTNSECGDVEAVLDGQIDQFQHDYL 358
>gi|126697716|ref|YP_001086613.1| peptide chain release factor 2 (RF-2) [Clostridium difficile 630]
gi|384359474|ref|YP_006197326.1| peptide chain release factor 2 [Clostridium difficile BI1]
gi|115249153|emb|CAJ66964.1| Peptide chain release factor 2 (RF-2) [Clostridium difficile 630]
Length = 328
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 147/324 (45%), Positives = 217/324 (66%), Gaps = 3/324 (0%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHID-MIKLAREENDTELELES 177
+N+ + W+D A R+ +E+ SL ++E ++ + LLE I+ +I++ EE+D +E +
Sbjct: 1 MNQQDFWNDNEVAQRVLQENKSLKETLEEYESL-KSLLEDIEVLIEIGLEEDDDSVERDI 59
Query: 178 LEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRR 237
+++ +M K E ++ LL+GE D + + + AG GG ++ DWA M+L+MY W++ +
Sbjct: 60 EKSIESMEEKLSEMKIKTLLNGEYDKNNAILSINAGTGGLDAQDWAQMLLRMYIRWSESK 119
Query: 238 GYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAA 297
GY+V L+D + AGIK ATI V+G A+GY K+E GVHRLVRISPFD +RHTSFA+
Sbjct: 120 GYKVKLLDIISDPEAGIKTATILVEGTNAYGYLKSEKGVHRLVRISPFDPSGKRHTSFAS 179
Query: 298 VAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNER 357
+ V P D + V+IN SDL+I+ +R+ GAGGQH NTTDSAVRI HIPTG+ CQNER
Sbjct: 180 IDVTPEL-DENIEVEINPSDLKIDTYRASGAGGQHVNTTDSAVRITHIPTGVVVQCQNER 238
Query: 358 SQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLR 417
SQH NK AM +L +++ +L+ Q + + + I+WG+QIR+YV PY++VKD R
Sbjct: 239 SQHLNKDRAMRLLMAKLIELKELEQKEKIEDIQGKYSQITWGSQIRSYVFQPYKLVKDHR 298
Query: 418 TNYEVSDPDSVLEGDLDGFILSYL 441
TN E + DSV+ G++D FI YL
Sbjct: 299 TNAEFGNVDSVMNGNIDLFINEYL 322
>gi|445064386|ref|ZP_21376447.1| peptide chain release factor 2 [Brachyspira hampsonii 30599]
gi|444504225|gb|ELV04926.1| peptide chain release factor 2 [Brachyspira hampsonii 30599]
Length = 308
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 141/288 (48%), Positives = 196/288 (68%), Gaps = 1/288 (0%)
Query: 160 DMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTES 219
+++++A E NDTE+E E L +++ E E L SGE D + Y+ + AGAGGTES
Sbjct: 22 ELVEMAIESNDTEMEKELETECLELQKVFDELETKNLFSGEFDSKNAYLTLNAGAGGTES 81
Query: 220 MDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRL 279
DWASM+ +MY + +R G+ V DE+PG+ AGIK+ + V G YA+GY ++E+GVHRL
Sbjct: 82 CDWASMLSRMYVRFCERHGFTVETTDELPGDEAGIKQISFYVQGLYAYGYLRSEIGVHRL 141
Query: 280 VRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSA 339
VRISPFD+ +RHTSF AV+V+P+ D V+IN +DLRI+ +R+ GAGGQH N T SA
Sbjct: 142 VRISPFDANAKRHTSFVAVSVMPDI-DEDIEVEINPADLRIDTYRASGAGGQHVNKTSSA 200
Query: 340 VRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWG 399
+RI HIPT CQ ERSQH NK AM +L++++ QLE + + + TDI+WG
Sbjct: 201 IRITHIPTNTVVQCQAERSQHNNKDMAMKMLKAKLYQLEKEKLDKEKQKIAGEKTDIAWG 260
Query: 400 NQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDK 447
NQIR+YV PY+MVKDLRT E + +SV++G++D FI +YL + K
Sbjct: 261 NQIRSYVFQPYQMVKDLRTGCESGNMNSVMDGNIDEFISAYLKQQIKK 308
>gi|349573878|ref|ZP_08885845.1| peptide chain release factor RF2 [Neisseria shayeganii 871]
gi|348014548|gb|EGY53425.1| peptide chain release factor RF2 [Neisseria shayeganii 871]
Length = 367
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 152/344 (44%), Positives = 221/344 (64%), Gaps = 4/344 (1%)
Query: 99 IKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEH 158
I+ L + RL + P LW+DP A I +E L G + + + ++
Sbjct: 23 IRVYLDYDGKKDRLEEVIGLSEDPELWNDPKKAQEIGKERKVLEGIVLTLDTIAGGIEDN 82
Query: 159 IDMIKLAREENDTELELESLEA-LLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGT 217
+I++ EE D + +LEA + + + E E + + D +C+I++ AGAGGT
Sbjct: 83 RLLIEMTVEEGDAD-GFAALEADVAGLEAQMAELEFKRMFNQPADVNNCFIDITAGAGGT 141
Query: 218 ESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVH 277
E+ DWA M+L+MY + +R+G++V +++E GEIAGI RATIK+DGEYA+G + E G+H
Sbjct: 142 EAEDWAGMLLRMYTRYGERKGFKVEVLEEDEGEIAGINRATIKLDGEYAYGLLRTETGIH 201
Query: 278 RLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTD 337
RLVR SPFDS +RHTSFA+V V P D S ++IN +DLRI+ +R+ GAGGQH N TD
Sbjct: 202 RLVRYSPFDSNNKRHTSFASVFVYPEV-DDSIEIEINPADLRIDTYRASGAGGQHINKTD 260
Query: 338 SAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDIS 397
SAVRI H PTGI CQN+RSQH NKA+AM +L+S++ +LE+ ++ + +++
Sbjct: 261 SAVRITHEPTGIVVQCQNDRSQHANKAAAMDMLKSKLFELEMRKRNEEKQALEDGKSEVG 320
Query: 398 WGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
WG+QIR+YVL R +KDLRT YE+ + +VL+GDLDGFI + L
Sbjct: 321 WGHQIRSYVLDSSR-IKDLRTGYEMGNTKAVLDGDLDGFIEASL 363
>gi|344199097|ref|YP_004783423.1| peptide chain release factor 2 [Acidithiobacillus ferrivorans SS3]
gi|343774541|gb|AEM47097.1| peptide chain release factor 2 [Acidithiobacillus ferrivorans SS3]
Length = 365
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 152/336 (45%), Positives = 216/336 (64%), Gaps = 4/336 (1%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL + EL P +W++ A + RE +L + + L + +M++LA E D
Sbjct: 33 RLEEVQRELEDPTIWNNAEKAQELGRERAALEAIITPMDKLTASLADGSEMLELALSEQD 92
Query: 171 TELELESLEALLTMRRKSKEK-ELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
EL L +++A L EK E + SG D +C++++QAGAGGTE+ DWA M+L+M
Sbjct: 93 EEL-LAAVDADLDSALAMVEKLEFQRMFSGAQDAANCFVDIQAGAGGTEAQDWAEMILRM 151
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y WA+ G+ L++ GE+AGIK A+I V G++AFG+ ++E GVHRLVR SPFDSG
Sbjct: 152 YLHWAESHGFAAELVEVSEGEVAGIKSASIHVRGDHAFGWLRSETGVHRLVRKSPFDSGN 211
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RRHTSFA+V + P D S V IN +DL+++ +R+ GAGGQH N TDSA+RI H+P+GI
Sbjct: 212 RRHTSFASVFIYPEI-DDSFEVDINPADLKVDTYRASGAGGQHVNKTDSAIRITHVPSGI 270
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHP 409
CQ +RSQH+N+A AM +L+S++ ++E+ ++A S +DI WG+QIR+YVL
Sbjct: 271 VVACQTDRSQHKNRAEAMRMLRSKLYEMEMQKRAVEKQALEDSKSDIGWGHQIRSYVLDQ 330
Query: 410 YRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT EV D VL+G LD FI + L A L
Sbjct: 331 SR-IKDLRTGIEVGDTQKVLDGALDIFIEAALKAGL 365
>gi|451945828|ref|YP_007466423.1| bacterial peptide chain release factor 2 (bRF-2) [Desulfocapsa
sulfexigens DSM 10523]
gi|451905176|gb|AGF76770.1| bacterial peptide chain release factor 2 (bRF-2) [Desulfocapsa
sulfexigens DSM 10523]
Length = 330
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 145/321 (45%), Positives = 211/321 (65%), Gaps = 1/321 (0%)
Query: 121 KPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEA 180
+P WDD A R+ +E G L ++ + L E ++++A EE D + E E +
Sbjct: 7 QPGFWDDADTAKRVQKELGKLQDLIEGWEGRWALLEEADLLLEMAAEEEDYDTEHEVAAS 66
Query: 181 LLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYR 240
L M + EL+ + SGE D + I + AGAGGTE+ DW ++L+MY WA+ +G++
Sbjct: 67 LPDMETTLEVAELECMFSGEHDTSNAIISIHAGAGGTEAQDWVGILLRMYLRWAEAKGFK 126
Query: 241 VTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAV 300
++D + G+ AG K T + G +A+GY ++E+G+HRLVRISPFD+ RRHTSFA+V V
Sbjct: 127 ADILDILAGDEAGTKSVTFIIKGRFAYGYMRSELGIHRLVRISPFDASGRRHTSFASVMV 186
Query: 301 IPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQH 360
+P D + V I+E DLR++ +R+ G+GGQH N TDSA+RI HIP+G+ CQNERSQH
Sbjct: 187 MPEL-DDTIDVDIDEKDLRVDTYRASGSGGQHVNKTDSAIRITHIPSGVVVQCQNERSQH 245
Query: 361 QNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNY 420
+N+ AM +L SR+ +LE +QA+ A DISWG+QIR+YVL PYR++KD RT
Sbjct: 246 RNRDMAMKMLASRLYELEKEKQAEQQAGLHGDKKDISWGSQIRSYVLQPYRLIKDHRTEV 305
Query: 421 EVSDPDSVLEGDLDGFILSYL 441
E+ + D+VL+G+LD FI +YL
Sbjct: 306 EMGNVDAVLDGNLDMFIKAYL 326
>gi|261409628|ref|YP_003245869.1| peptide chain release factor 2 [Paenibacillus sp. Y412MC10]
gi|261286091|gb|ACX68062.1| peptide chain release factor 2 [Paenibacillus sp. Y412MC10]
Length = 331
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 147/327 (44%), Positives = 209/327 (63%), Gaps = 1/327 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
P+ WDD A + E ++ + + + + + + + MI+LA EE D L E E +
Sbjct: 4 PDFWDDNEKAQALIAEMNAVKSSVDQYQKLQADYDDAVVMIELADEEGDDSLAGEIGETI 63
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
+ + +E EL LL+ D + +E+ GAGGTES DW M+ +MY WA++RG++V
Sbjct: 64 KDLVGRVEEFELQLLLNQPYDKMNAILELHPGAGGTESQDWGQMLHRMYTRWAEKRGFKV 123
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
+D +PG+ AGIK T+ + G A+GY KAE GVHRLVRISPFDS RRHTSF + V+
Sbjct: 124 ETLDYLPGDEAGIKSVTLLIKGFNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCDVV 183
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D + I DL+I+ +R+ GAGGQH NTTDSAVRI H+PTG+ TCQNERSQ +
Sbjct: 184 PEITD-DVEIDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTGVVVTCQNERSQIK 242
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
N+ AM +L+S++ + +I Q + AE +DI+WG+QIR+YV HPY MVKD RT E
Sbjct: 243 NRERAMTMLRSKLYERKIEEQQKELAEIRGEQSDIAWGSQIRSYVFHPYSMVKDHRTQVE 302
Query: 422 VSDPDSVLEGDLDGFILSYLSASLDKD 448
+ +V++GDLDGFI YL + + ++
Sbjct: 303 TGNVGAVMDGDLDGFIDGYLRSQIKQE 329
>gi|293610588|ref|ZP_06692888.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292826932|gb|EFF85297.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 337
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 153/336 (45%), Positives = 215/336 (63%), Gaps = 4/336 (1%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL + EL P +W+D A +++E G L + + +L + M+ LA E +D
Sbjct: 5 RLEEVLRELEDPAIWNDQSRAQAMAKEKGELENVINVLDGLSTQLEDAKAMLDLAVEADD 64
Query: 171 TELELESLEALLTMRRKSKEK-ELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
L LE +++ L K E + S +DP CY+E+Q+G+GGTE+ DWASM+L+M
Sbjct: 65 ESL-LEDVQSELGAAEDELAKLEFRRMFSNPMDPNPCYVEIQSGSGGTEAQDWASMLLRM 123
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y W +R G++ LM+ G++AGIK ATI+V+GEYA+G+ + E GVHRLVR SPFDSG
Sbjct: 124 YMRWIERHGFKAELMEVSDGDVAGIKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGN 183
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RRHTSF+AV + P D + + IN SD+R + +R+ GAGGQH N TDSAVR+ HIPTGI
Sbjct: 184 RRHTSFSAVFISPEV-DDNIEIDINPSDVRTDTYRASGAGGQHINKTDSAVRLTHIPTGI 242
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHP 409
CQN+RSQH N+ A L++R+ +LE+ ++ + S +DI WG+QIR+YVL
Sbjct: 243 VVACQNQRSQHANRDHAWKQLRARLYELEMQKRNEAAQALEDSKSDIGWGSQIRSYVLDD 302
Query: 410 YRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E S+ +VL+GDLD FI + L L
Sbjct: 303 SR-IKDLRTGVENSNTGAVLDGDLDRFIEASLKQGL 337
>gi|74316939|ref|YP_314679.1| peptide chain release factor 2 [Thiobacillus denitrificans ATCC
25259]
gi|74056434|gb|AAZ96874.1| peptide chain release factor 2 [Thiobacillus denitrificans ATCC
25259]
Length = 349
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 147/321 (45%), Positives = 214/321 (66%), Gaps = 4/321 (1%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
P+ W+D A + RE SL + + L + ++ ++AREEND + L +++A
Sbjct: 28 PDFWNDAARAQELGRERKSLEDVVLVLDRVTSGLKDAGELFEMAREENDDDT-LAAVQAD 86
Query: 182 LT-MRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYR 240
+ + + E + S DP +C++++QAGAGGTE+ DWASM+L+ Y +A+R+G++
Sbjct: 87 IDGLEKDVATLEFRRMFSNPADPSNCFLDIQAGAGGTEACDWASMLLRQYLKYAERKGFK 146
Query: 241 VTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAV 300
L++E G++AGIK A+IK++G+YA+GY + E GVHRLVR SPFDS RHTSFA+V V
Sbjct: 147 AELLEESEGDVAGIKSASIKIEGDYAYGYLRTETGVHRLVRKSPFDSSGGRHTSFASVFV 206
Query: 301 IPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQH 360
P D S V+IN +DLR++ +R+ GAGGQH N TDSAVRI HIP+GI CQN+RSQH
Sbjct: 207 YPEV-DDSIEVEINPADLRVDTYRASGAGGQHINKTDSAVRITHIPSGIVVQCQNDRSQH 265
Query: 361 QNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNY 420
+N+A AM +L+S++ + E+ ++ + D+ WG+QIR+YVL R +KDLRTN
Sbjct: 266 KNRAEAMSMLKSKLYEAELRKRQAEQDKLEAGKADVGWGHQIRSYVLDNSR-IKDLRTNV 324
Query: 421 EVSDPDSVLEGDLDGFILSYL 441
EVS VL+GDLD FI + L
Sbjct: 325 EVSATQKVLDGDLDVFIEASL 345
>gi|302131691|ref|ZP_07257681.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
syringae pv. tomato NCPPB 1108]
Length = 304
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 145/292 (49%), Positives = 206/292 (70%), Gaps = 4/292 (1%)
Query: 155 LLEHIDMIKLAREENDTELELESLEALLTMRRKSKEK-ELDALLSGELDPCSCYIEVQAG 213
L++ D++ ++ EE D + ++ + A + R S EK E + SGE+DP + Y+++QAG
Sbjct: 16 LVDAKDLLLMSAEEED-QAAIDDVAAEVERLRASLEKLEFRRMFSGEMDPNNAYLDIQAG 74
Query: 214 AGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAE 273
+GGTE+ DWA+++L+MY WA +RG+ T+M+ GE+AGIK AT+ + GEYAFG+ + E
Sbjct: 75 SGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTE 134
Query: 274 VGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHA 333
+GVHRLVR SPFDSG RRHTSF+AV V P D + + IN SDLRI+ +RS GAGGQH
Sbjct: 135 IGVHRLVRKSPFDSGTRRHTSFSAVFVSPEI-DDNIEIDINPSDLRIDTYRSSGAGGQHV 193
Query: 334 NTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSL 393
NTTDSAVRI H+PT +CQNERSQH NK +AM +L++R+ + E+ ++ + +
Sbjct: 194 NTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDTK 253
Query: 394 TDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+DI WG+QIR+YVL R +KDLRTN E SD D VL+GD+D ++++ L L
Sbjct: 254 SDIGWGHQIRSYVLDASR-IKDLRTNIERSDCDKVLDGDIDEYLIASLKQGL 304
>gi|429124274|ref|ZP_19184806.1| peptide chain release factor 2 [Brachyspira hampsonii 30446]
gi|426280004|gb|EKV57023.1| peptide chain release factor 2 [Brachyspira hampsonii 30446]
Length = 308
Score = 294 bits (752), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 141/288 (48%), Positives = 196/288 (68%), Gaps = 1/288 (0%)
Query: 160 DMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTES 219
+++++A E NDTE+E E L +++ E E L SGE D + Y+ + AGAGGTES
Sbjct: 22 ELVEMAIESNDTEMEKELEAECLELQKVFDELETKNLFSGEFDSKNAYLTLNAGAGGTES 81
Query: 220 MDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRL 279
DWASM+ +MY + +R G+ V DE+PG+ AGIK+ + V G YA+GY ++E+GVHRL
Sbjct: 82 CDWASMLSRMYVRFCERHGFTVETTDELPGDEAGIKQISFYVQGLYAYGYLRSEIGVHRL 141
Query: 280 VRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSA 339
VRISPFD+ +RHTSF AV+V+P+ D V+IN +DLRI+ +R+ GAGGQH N T SA
Sbjct: 142 VRISPFDANAKRHTSFVAVSVMPDI-DEDIEVEINPADLRIDTYRASGAGGQHVNKTSSA 200
Query: 340 VRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWG 399
+RI HIPT CQ ERSQH NK AM +L++++ QLE + + + TDI+WG
Sbjct: 201 IRITHIPTNTVVQCQAERSQHNNKDMAMKMLKAKLYQLEKEKLDKEKQKIAGEKTDIAWG 260
Query: 400 NQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDK 447
NQIR+YV PY+MVKDLRT E + +SV++G++D FI +YL + K
Sbjct: 261 NQIRSYVFQPYQMVKDLRTGCESGNMNSVMDGNIDEFISAYLKQQIKK 308
>gi|298252599|ref|ZP_06976393.1| protein chain release factor B [Gardnerella vaginalis 5-1]
gi|297532963|gb|EFH71847.1| protein chain release factor B [Gardnerella vaginalis 5-1]
Length = 378
Score = 294 bits (752), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 149/339 (43%), Positives = 218/339 (64%), Gaps = 2/339 (0%)
Query: 99 IKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEH 158
I K L +L V + L + +P LWDD HA +++ + + ++K ++A +Q + +
Sbjct: 20 ISKALDVDSLKVTIADLEKQAAEPGLWDDSEHAQQVTSKLSAAQSQLKRLQAVDQRIEDT 79
Query: 159 IDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTE 218
+I+L +EE D + E+ E L + + + E+ LL GE D S + +++GAGG +
Sbjct: 80 KTLIELGQEEGDADSMSEAQEELGNIAHELDDMEVQTLLDGEYDARSAVVTIRSGAGGVD 139
Query: 219 SMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHR 278
+ D+A M+L+MY WA+R GY+ +MD E AGIK AT +VD YA+G E G HR
Sbjct: 140 AADFAQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTHR 199
Query: 279 LVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDS 338
+VRISPFD+ RR T F+AV VIP +++ H+ I +SD+R++ F++ G GGQ NTT S
Sbjct: 200 MVRISPFDNQGRRQTGFSAVEVIPLV-EATDHIDIPDSDIRVDTFQASGPGGQGVNTTYS 258
Query: 339 AVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISW 398
AVRI H+PTG+ + Q+ERSQ QN+A+AM VLQSR+ L+ A +A E + SW
Sbjct: 259 AVRITHLPTGLVVSMQDERSQIQNRAAAMAVLQSRLLVLKHAEEAAKKKELAGDIK-ASW 317
Query: 399 GNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
G+Q+R+YVLHPY+MVKDLRT YE S +V +GD+DGFI
Sbjct: 318 GDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFI 356
>gi|108798578|ref|YP_638775.1| peptide chain release factor 2 [Mycobacterium sp. MCS]
gi|119867678|ref|YP_937630.1| peptide chain release factor 2 [Mycobacterium sp. KMS]
gi|123070429|sp|Q1BBL5.1|RF2_MYCSS RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|166225110|sp|A1UDD2.1|RF2_MYCSK RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|108768997|gb|ABG07719.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium sp.
MCS]
gi|119693767|gb|ABL90840.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium sp.
KMS]
Length = 371
Score = 294 bits (752), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 155/360 (43%), Positives = 222/360 (61%), Gaps = 11/360 (3%)
Query: 84 DWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
D ++ AA+A ++ +++ L L R+ L E + PNLWDD A +++ E
Sbjct: 4 DRQADIAALAATLTTVERVLDVDGLRDRIQKLEQEASDPNLWDDQSRAQKVTSELSHAQN 63
Query: 144 KMKEVKAFEQELLEHIDMIKLAREENDTELELESLEA---LLTMRRKSKEKELDALLSGE 200
+++ V+ Q + + + ++A EE + E EA L +R + E+ LLSGE
Sbjct: 64 ELRRVEELRQRVEDLPVLYEMAAEEEGQDAENAGAEADAELAKLRVDIEAMEVRTLLSGE 123
Query: 201 LDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIK 260
D + +++GAGG ++ DWA M+++MY WA++ Y V + D E AGIK AT
Sbjct: 124 YDEREAVVTIRSGAGGVDAADWAEMLMRMYIRWAEQHDYPVEVFDTSYAEEAGIKSATFA 183
Query: 261 VDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRI 320
V YA+G E G HRLVRISPFD+ RR TSFA V V+P +++ H+ + E+DLR+
Sbjct: 184 VHAPYAYGTLSVEQGTHRLVRISPFDNQSRRQTSFADVEVLPVV-ETTDHIDVPETDLRV 242
Query: 321 ERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIA 380
+ +RS G GGQ NTTDSAVR+ HIPTGI TCQNE+SQ QNK +AM VLQ+++ +A
Sbjct: 243 DVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMRVLQAKL----LA 298
Query: 381 RQAQMNAEHTQSLT---DISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
R+ Q +L SWGNQ+R+YVLHPY+MVKDLRT YEV +P +VL+GD+DGF+
Sbjct: 299 RKKQEERAELDALKGDGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPSAVLDGDIDGFL 358
>gi|342215025|ref|ZP_08707694.1| peptide chain release factor 2 [Veillonella sp. oral taxon 780 str.
F0422]
gi|341590131|gb|EGS33380.1| peptide chain release factor 2 [Veillonella sp. oral taxon 780 str.
F0422]
Length = 330
Score = 294 bits (752), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 142/323 (43%), Positives = 213/323 (65%), Gaps = 1/323 (0%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
++ P+ W+DP A IS+E L ++ K ++ E M+++A +E D +E E
Sbjct: 1 MSDPDFWNDPDSARDISQEATQLKDAVEGYKKLVTDIEEAKLMLEMAIDEEDVSMEGELT 60
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
+ + + + +E+ LLSGE D + + AGAGGTE+ DW SM+++MY WA+++G
Sbjct: 61 TMVEQLTHEVEHREVLLLLSGEYDKNNAILTFHAGAGGTEAQDWCSMLIRMYLRWAEKQG 120
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
Y ++LMDE G+ AGIK AT + GE AFGY K+E GVHRLVRISPFDS RRHTSF AV
Sbjct: 121 YSISLMDEQVGDEAGIKSATFLIKGENAFGYMKSEKGVHRLVRISPFDSAARRHTSFCAV 180
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
V+P D + + ++ D++++ +R+ GAGGQH N TDSAVR+ HIPTGI CQ+ERS
Sbjct: 181 DVMPEI-DETVEINLDMKDVQVDTYRASGAGGQHINKTDSAVRMTHIPTGIVVQCQSERS 239
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
Q QN+ + +L++++ +LE+ +QA++ + + I WG+QIR+YV HPY MVKD RT
Sbjct: 240 QIQNREQCLKLLRAKLFELELEKQAELKEQLGGTYQAIEWGSQIRSYVFHPYNMVKDHRT 299
Query: 419 NYEVSDPDSVLEGDLDGFILSYL 441
+ E + +V++G+LD F+ +L
Sbjct: 300 SVETGNVQAVMDGNLDQFMEGFL 322
>gi|395792395|ref|ZP_10471829.1| peptide chain release factor 2 [Bartonella vinsonii subsp.
arupensis Pm136co]
gi|395432573|gb|EJF98552.1| peptide chain release factor 2 [Bartonella vinsonii subsp.
arupensis Pm136co]
Length = 322
Score = 294 bits (752), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 149/307 (48%), Positives = 212/307 (69%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + +++F + L E I++I++ EE+D E+ ++ ++ ++ + ++++D
Sbjct: 3 RERQRLDDSINGIRSFTKTLEECIELIEMGEEESDVEIITDAENSIRNLKNEIDKRQIDV 62
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+EV AGAGGTES DWASM+L+MY WA++ +V L++ GE AGIK
Sbjct: 63 LLSGEADQNDTYLEVHAGAGGTESQDWASMLLRMYTRWAEQHKMKVDLLEIHDGEEAGIK 122
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI V G A+G K E GVHRLVRISPFDS +RHTSFA++ V P D + V ++E
Sbjct: 123 SATILVKGHNAYGMLKTESGVHRLVRISPFDSNAKRHTSFASIWVYP-VIDDNIEVDVSE 181
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
+D+RI+ +R+ GAGGQH NTTDSAVRI HI TGI CQ ERSQH+N+A+A +L++R+
Sbjct: 182 ADVRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNRATAWSMLRARLY 241
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ ++ + S T+I WG+QIR+YVL PY++VKDLRT E +DP SVL G+LD
Sbjct: 242 EEELKKREEETNVVEASKTEIGWGHQIRSYVLQPYQLVKDLRTGVENTDPQSVLNGNLDA 301
Query: 436 FILSYLS 442
FI + L+
Sbjct: 302 FIEAALA 308
>gi|309777858|ref|ZP_07672804.1| peptide chain release factor 2 [Erysipelotrichaceae bacterium
3_1_53]
gi|308914419|gb|EFP60213.1| peptide chain release factor 2 [Erysipelotrichaceae bacterium
3_1_53]
Length = 327
Score = 294 bits (752), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 156/327 (47%), Positives = 210/327 (64%), Gaps = 9/327 (2%)
Query: 123 NLWDDPVHAGRISREHGSLMGKMKEVKAFEQ--ELLEHIDMIK-LAREENDTELELESLE 179
+ W DP HA + R+ L G V+++E+ LE ++ L +E+ D E+ E E
Sbjct: 6 DFWSDPQHAQTLIRQ---LNGIKDIVESYEKLNSALEGLEETHDLLKEDYDDEI-FELFE 61
Query: 180 A-LLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
A + M + + E+ LLS E D S +E+ GAGGTES DWA M+ +MY WA+++G
Sbjct: 62 AEYMEMEKNFDDFEIKILLSHEYDHSSAILELHPGAGGTESCDWADMLYRMYSRWAEKKG 121
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
++V+++D +PGE AGIK T V+G+ A+GY KAE GVHRLVRISPFDSG RRHTSFA++
Sbjct: 122 FKVSVLDYLPGEEAGIKSVTFLVEGDMAYGYLKAEKGVHRLVRISPFDSGGRRHTSFASL 181
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
V+P D ++I DL +E R+ GAGGQH N TDSAVR++H PTG+ ATCQN RS
Sbjct: 182 DVMPQFND-EIEIEIKPEDLIVETKRASGAGGQHINKTDSAVRMVHKPTGLVATCQNGRS 240
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
QH+N+ A+ VL+SR+ Q I Q AE WG+QIR+YV HPY MVKD RT
Sbjct: 241 QHENREEALRVLKSRLYQKMIEEQEAKLAEIKGEQKANEWGSQIRSYVFHPYSMVKDHRT 300
Query: 419 NYEVSDPDSVLEGDLDGFILSYLSASL 445
+ E SD V++GDLD FI +YL +
Sbjct: 301 SCETSDVQGVMDGDLDAFIFAYLKTQI 327
>gi|451942033|ref|YP_007462670.1| peptide chain release factor 2 [Bartonella vinsonii subsp.
berkhoffii str. Winnie]
gi|451901420|gb|AGF75882.1| peptide chain release factor 2 [Bartonella vinsonii subsp.
berkhoffii str. Winnie]
Length = 322
Score = 294 bits (752), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 149/307 (48%), Positives = 212/307 (69%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + +++F + L E I++I++ EE+D E+ ++ ++ ++ + ++++D
Sbjct: 3 RERQRLDDSINGIRSFTKTLEECIELIEMGEEESDVEIITDAENSIRNLKNEIYKRQIDV 62
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+EV AGAGGTES DWASM+L+MY WA++ +V L++ GE AGIK
Sbjct: 63 LLSGEADQNDTYLEVHAGAGGTESQDWASMLLRMYTRWAEQHKMKVDLLEIHDGEEAGIK 122
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI V G A+G K E GVHRLVRISPFDS +RHTSFA++ V P D + V ++E
Sbjct: 123 SATILVKGHNAYGMLKTESGVHRLVRISPFDSNAKRHTSFASIWVYP-VIDDNIEVDVSE 181
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
+D+RI+ +R+ GAGGQH NTTDSAVRI HI TGI CQ ERSQH+N+A+A +L++R+
Sbjct: 182 ADVRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNRATAWSMLRARLY 241
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ ++ + S T+I WG+QIR+YVL PY++VKDLRT E +DP SVL G+LD
Sbjct: 242 EEELKKREEETNAVEASKTEIGWGHQIRSYVLQPYQLVKDLRTGIENTDPQSVLNGNLDA 301
Query: 436 FILSYLS 442
FI + L+
Sbjct: 302 FIEAALA 308
>gi|298157123|gb|EFH98211.1| Peptide chain release factor 2 [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 293
Score = 294 bits (752), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 145/292 (49%), Positives = 206/292 (70%), Gaps = 4/292 (1%)
Query: 155 LLEHIDMIKLAREENDTELELESLEALLTMRRKSKEK-ELDALLSGELDPCSCYIEVQAG 213
L + D++ ++ EE D + ++ + A + R+S EK E + SGE+DP + Y+++QAG
Sbjct: 5 LADAKDLLLMSAEEED-QAAVDDVAAEVERLRESLEKLEFRRMFSGEMDPNNAYLDIQAG 63
Query: 214 AGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAE 273
+GGTE+ DWA+++L+MY WA +RG+ T+M+ GE+AGIK AT+ + GEYAFG+ + E
Sbjct: 64 SGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTE 123
Query: 274 VGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHA 333
+GVHRLVR SPFDSG RRHTSF+AV V P D + + IN SDLRI+ +RS GAGGQH
Sbjct: 124 IGVHRLVRKSPFDSGNRRHTSFSAVFVSPEI-DDNIEIDINPSDLRIDTYRSSGAGGQHV 182
Query: 334 NTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSL 393
NTTDSAVRI H+PT +CQNERSQH NK +AM +L++R+ + E+ ++ + +
Sbjct: 183 NTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDTK 242
Query: 394 TDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+DI WG+QIR+YVL R +KDLRTN E SD D VL+GD+D ++++ L L
Sbjct: 243 SDIGWGHQIRSYVLDASR-IKDLRTNIERSDCDKVLDGDIDEYLIASLKQGL 293
>gi|260887225|ref|ZP_05898488.1| peptide chain release factor 2 [Selenomonas sputigena ATCC 35185]
gi|260863287|gb|EEX77787.1| peptide chain release factor 2 [Selenomonas sputigena ATCC 35185]
Length = 330
Score = 294 bits (752), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 146/328 (44%), Positives = 213/328 (64%), Gaps = 7/328 (2%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
+ +P WD+ A +I++E ++ G + + K + + ++++A EENDT LE E
Sbjct: 1 MGEPTFWDNAEEAQKINQELAAIKGSVDKYKEIVSKTDDAQALLEMALEENDTSLEPEVQ 60
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
T++ +E EL+ LLSG D + + + AGAGGTE+ DW M+L+MY WA+R G
Sbjct: 61 TEFETIKTAVRELELEVLLSGPYDANNAILTLHAGAGGTEAQDWTQMLLRMYGRWAERHG 120
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
+ V D +PG+ AG+K AT+ ++G A+GY K+E GVHRLVRISPFDS RRHTSF+A
Sbjct: 121 FSVVTADLLPGDEAGVKSATLFINGHNAYGYLKSEKGVHRLVRISPFDSNARRHTSFSAC 180
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
++P D + V IN +D+R++ +R+ GAGGQH N T SAVR+ H+PTGI CQNERS
Sbjct: 181 DIMPEI-DDAVEVAINMADVRVDTYRASGAGGQHINKTSSAVRMTHMPTGIVVQCQNERS 239
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTD---ISWGNQIRTYVLHPYRMVKD 415
Q QN+ M +L++++ +LE Q + AE + D I WG+QIR+YV PY MVKD
Sbjct: 240 QLQNREQCMKMLRAKLFELE---QEKKEAEIQKLEGDQQKIEWGSQIRSYVFQPYTMVKD 296
Query: 416 LRTNYEVSDPDSVLEGDLDGFILSYLSA 443
+RT E + +V++GDLD FI ++L+A
Sbjct: 297 MRTGMETGNVQAVMDGDLDAFIEAFLAA 324
>gi|423088861|ref|ZP_17077231.1| peptide chain release factor 2 [Clostridium difficile 70-100-2010]
gi|357558975|gb|EHJ40444.1| peptide chain release factor 2 [Clostridium difficile 70-100-2010]
Length = 338
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 148/334 (44%), Positives = 223/334 (66%), Gaps = 5/334 (1%)
Query: 109 NVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHID-MIKLARE 167
N+++N ++N+ + W+D A R+ +E+ SL ++E ++ + LLE I+ +I++ E
Sbjct: 3 NIQIN--EEKMNQQDFWNDNEVAQRVLQENKSLKETLEEYESL-KSLLEDIEVLIEIGLE 59
Query: 168 ENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVL 227
E++ +E + +++ +M K E ++ LL+GE D + + + AG GG ++ DWA M+L
Sbjct: 60 EDNDSVERDIEKSIESMEEKLSEMKIKTLLNGEYDKNNAILSINAGTGGLDAQDWAQMLL 119
Query: 228 QMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDS 287
+MY W++ +GY+V L+D + AGIK ATI V+G A+GY K+E GVHRLVRISPFD
Sbjct: 120 RMYIRWSESKGYKVKLLDIISDPEAGIKTATILVEGTNAYGYLKSEKGVHRLVRISPFDP 179
Query: 288 GKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPT 347
+RHTSFA++ V P D + V+IN SDL+I+ +R+ GAGGQH NTTDSAVRI HIPT
Sbjct: 180 SGKRHTSFASIDVTPEL-DENIEVEINPSDLKIDTYRASGAGGQHVNTTDSAVRITHIPT 238
Query: 348 GITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVL 407
G+ CQNERSQH NK AM +L +++ +L+ Q + + + I+WG+QIR+YV
Sbjct: 239 GVVVQCQNERSQHLNKDRAMRLLMAKLIELKELEQKEKIEDIQGKYSQITWGSQIRSYVF 298
Query: 408 HPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
PY++VKD RTN E + DSV+ G++D FI YL
Sbjct: 299 QPYKLVKDHRTNAEFGNVDSVMNGNIDLFINEYL 332
>gi|383820469|ref|ZP_09975725.1| peptide chain release factor 2 [Mycobacterium phlei RIVM601174]
gi|383334859|gb|EID13292.1| peptide chain release factor 2 [Mycobacterium phlei RIVM601174]
Length = 368
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 155/357 (43%), Positives = 226/357 (63%), Gaps = 8/357 (2%)
Query: 84 DWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
D ++ AA+ ++ +++ + + L R+ L E + PNLWDD A +++ + G
Sbjct: 4 DRQADIAALDATLTTVERVVDVEGLRGRIEKLEHEASDPNLWDDQARAQKVTSDLSHAQG 63
Query: 144 KMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDP 203
+++ V+ + L + + +LA EE + E+ L +R + E+ LLSGE D
Sbjct: 64 ELRRVEDLRRRLDDLPVLYELAAEEGGADELAEADAELKKLREDIEAMEVRTLLSGEYDE 123
Query: 204 CSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDG 263
+ +++GAGG ++ DWA M+++MY WA++ Y V ++D E AGIK AT V
Sbjct: 124 REAVVTIRSGAGGVDAADWAEMLMRMYIRWAEKHNYSVEVLDTSYAEEAGIKSATFVVHA 183
Query: 264 EYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERF 323
+A+G E G HRLVRISPFD+ RR TSFA V V+P +++ H+ I E+D+R++ +
Sbjct: 184 PFAYGTLSVEQGTHRLVRISPFDNQSRRQTSFADVEVLPVV-ETTDHIDIPETDVRVDVY 242
Query: 324 RSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ- 382
RS G GGQ NTTDSAVR+ HIPTGI TCQNE+SQ QNK SAM VLQ+++ LE RQ
Sbjct: 243 RSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKMSAMRVLQAKL--LERKRQE 300
Query: 383 --AQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
A+M+A + SWGNQ+R+YVLHPY+MVKDLRT YEV +P +VL+GD+DGF+
Sbjct: 301 ERAEMDALKGDGGS--SWGNQMRSYVLHPYQMVKDLRTEYEVGNPSAVLDGDIDGFL 355
>gi|386334000|ref|YP_006030171.1| peptide chain release factor 2 (rf-2) protein [Ralstonia
solanacearum Po82]
gi|334196450|gb|AEG69635.1| peptide chain release factor 2 (rf-2) protein [Ralstonia
solanacearum Po82]
Length = 300
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 141/292 (48%), Positives = 206/292 (70%), Gaps = 4/292 (1%)
Query: 151 FEQELLEHIDMIKLAREENDTELELESLEA-LLTMRRKSKEKELDALLSGELDPCSCYIE 209
+++L ++ +LAREE D + +E++EA MR ++ E + SG +D +C+I+
Sbjct: 8 LDEDLTGGAELFELAREEGDDDT-IEAIEADTAGMRAIVEDMEFRRMFSGPMDAANCFID 66
Query: 210 VQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGY 269
+QAGAGGTE+ DWASM+L+ Y + +R+G++ +++E G++AGIK A+IKV+GEYAFG+
Sbjct: 67 IQAGAGGTEACDWASMLLRQYLKYCERKGFKAEVLEESEGDVAGIKSASIKVEGEYAFGF 126
Query: 270 AKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAG 329
+ E GVHRLVR SPFDS RHTSF+++ V P D S +++N +DLR++ +R+ GAG
Sbjct: 127 LRTETGVHRLVRKSPFDSAGGRHTSFSSIFVYPEV-DDSIEIEVNPADLRVDTYRASGAG 185
Query: 330 GQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEH 389
GQH N TDSAVRI HIPTGI CQN+RSQH+N+A AM +L+SR+ + E+ ++
Sbjct: 186 GQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHELRKRQAAADAQ 245
Query: 390 TQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
+ TD+ WG+QIR+YVL R +KDLRTN E+S+ VL+GDLD FI + L
Sbjct: 246 EAAKTDVGWGHQIRSYVLDQSR-IKDLRTNVEISNTQKVLDGDLDAFIQASL 296
>gi|415703468|ref|ZP_11459284.1| peptide chain release factor 2 [Gardnerella vaginalis 284V]
gi|415716587|ref|ZP_11466579.1| peptide chain release factor 2 [Gardnerella vaginalis 1400E]
gi|388052508|gb|EIK75530.1| peptide chain release factor 2 [Gardnerella vaginalis 284V]
gi|388057204|gb|EIK80037.1| peptide chain release factor 2 [Gardnerella vaginalis 1400E]
Length = 380
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 148/340 (43%), Positives = 219/340 (64%), Gaps = 2/340 (0%)
Query: 98 VIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLE 157
+I K L +L + L + ++P LWDD HA +++ + + ++K ++A EQ + +
Sbjct: 19 LISKALDVNSLKTAIADLEKQASEPGLWDDSEHAQQVTSKLSAAQSQLKRLQAVEQRIED 78
Query: 158 HIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGT 217
+I+L +EE D + E+ E L + + + E+ LL GE D + + +++GAGG
Sbjct: 79 TKTLIELGQEEEDADSMSEAQEELGNIAHELDDMEVQTLLDGEYDARAAVVTIRSGAGGV 138
Query: 218 ESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVH 277
++ D+A M+L+MY WA+R GY+ +MD E AGIK AT +VD YA+G E G H
Sbjct: 139 DAADFAQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTH 198
Query: 278 RLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTD 337
R+VRISPFD+ RR T F+AV VIP +++ H+ I +SD+R++ F++ G GGQ NTT
Sbjct: 199 RMVRISPFDNQGRRQTGFSAVEVIPLV-EATDHIDIPDSDIRVDTFQASGPGGQGVNTTY 257
Query: 338 SAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDIS 397
SAVRI H+PTG+ + Q+ERSQ QN+A+AM VLQSR+ L+ A +A E + S
Sbjct: 258 SAVRITHLPTGLVVSMQDERSQIQNRAAAMAVLQSRLLVLKHAEEAAKKKELAGDIK-AS 316
Query: 398 WGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
WG+Q+R+YVLHPY+MVKDLRT YE S +V +GD+DGFI
Sbjct: 317 WGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFI 356
>gi|218461792|ref|ZP_03501883.1| peptide chain release factor 2 [Rhizobium etli Kim 5]
Length = 320
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 152/307 (49%), Positives = 213/307 (69%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + VK EQ+L ++I++I+L EE D + E+ + L ++ ++ ++++A
Sbjct: 2 RERQQLDDGINGVKQLEQQLNDNIELIELGEEEGDQSVVKEAEDTLKALKAEAARRQVEA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
+LSGE D Y+EV +GAGGTES DWA+M+L+MY WA+R+ ++V L++ GE AGIK
Sbjct: 62 MLSGEADGNDTYLEVHSGAGGTESQDWANMLLRMYTRWAERQRFKVELLEVHDGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
AT+ V G A+G+ K E GVHRLVRISP+DS RRHTSF+++ V P D S ++INE
Sbjct: 122 SATLLVKGHNAYGWLKTESGVHRLVRISPYDSNARRHTSFSSIWVYPVV-DDSIQIEINE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD RI+ +RS GAGGQH NTTDSAVRI HIPTGI CQ ERSQH+N+A A +L++R+
Sbjct: 181 SDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQCQQERSQHKNRAKAWDMLRARMY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ ++ S TDI WG+QIR+YVL PY++VKDLRT + PD VL+GDL+
Sbjct: 241 EAELKKREDAANAEAASKTDIGWGHQIRSYVLQPYQLVKDLRTGVASTAPDDVLDGDLNE 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMEAALA 307
>gi|403530482|ref|YP_006665011.1| peptide chain release factor 2 [Bartonella quintana RM-11]
gi|403232554|gb|AFR26297.1| peptide chain release factor 2 [Bartonella quintana RM-11]
Length = 322
Score = 293 bits (751), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 148/310 (47%), Positives = 210/310 (67%), Gaps = 1/310 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + +++F + L E I++I + EE+D E+ ++ + ++ + ++++D
Sbjct: 3 RERQRLDDSISGIQSFTKTLEECIELIAMGEEESDVEIINDAENLIRNLKNEIDKRQIDM 62
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLS E DP Y+EV AGAGGTES DWA M+L+MY WA++ +V +++ GE AGIK
Sbjct: 63 LLSREADPNDTYLEVHAGAGGTESQDWALMLLRMYMRWAEQHKMKVEILEIHDGEEAGIK 122
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI V G A+G K E GVHRLVRISP+DS +RHTSFA++ V P D + V ++E
Sbjct: 123 SATIFVKGHNAYGLLKTESGVHRLVRISPYDSNAKRHTSFASIWVYP-VIDDNIEVDVSE 181
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD+RI+ +RS GAGGQH NTTDSAVRI HI TGI CQ ERSQH+N+A+A +L++R+
Sbjct: 182 SDVRIDTYRSSGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNRATAWSMLRARLY 241
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ ++ + S T+I WG+QIR+YVL PY++VKDLRT E +DP SVL G+LD
Sbjct: 242 EQELKKREEKTNAVESSKTEIGWGHQIRSYVLQPYQLVKDLRTGVENTDPQSVLNGNLDT 301
Query: 436 FILSYLSASL 445
FI + L+ +
Sbjct: 302 FIEAALAQCI 311
>gi|384226737|ref|YP_005618488.1| peptide chain release factor 2 [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
gi|311087834|gb|ADP67913.1| peptide chain release factor 2 [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
Length = 349
Score = 293 bits (751), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 138/323 (42%), Positives = 214/323 (66%), Gaps = 2/323 (0%)
Query: 115 LSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELE 174
+ EL+ P W + + ++++E L ++ + E+ + E + ++LA E D +
Sbjct: 21 IDLELSSPKTWTEQISIKKLNKEKYLLNSIIQNINEIEENIKEVVIFLELAIETQDNLVF 80
Query: 175 LESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWA 234
ESL + + ++ K+ E + S + D CYI++Q+G+GGT++ DW+ M+L+MY WA
Sbjct: 81 KESLLEIQKIEQEIKKLEFYRMFSKKNDYYDCYIDIQSGSGGTDAQDWSKMLLRMYLRWA 140
Query: 235 QRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTS 294
++G+ ++DE GEI GIK +TIKV GEYAFG+ + E G+HRL+R SPFDSGKRRHTS
Sbjct: 141 DKKGFHTEIIDESIGEIVGIKSSTIKVSGEYAFGWFRTETGIHRLIRKSPFDSGKRRHTS 200
Query: 295 FAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQ 354
F+++ + P+ + + IN SDLRI+ +R+ GAGGQH N T+SAVRI H+PT I CQ
Sbjct: 201 FSSIFIYPDINE-KIDININYSDLRIDVYRASGAGGQHVNRTESAVRITHLPTNIVTQCQ 259
Query: 355 NERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVK 414
N RSQH+NK AM +QS++ ++++ ++ + + Q+ +DI+WGNQIR+Y+L + +K
Sbjct: 260 NNRSQHKNKEQAMKQMQSKLYEIQMRKKQEEKQKIEQNKSDITWGNQIRSYILDNSK-IK 318
Query: 415 DLRTNYEVSDPDSVLEGDLDGFI 437
DLRT E + SVL+GDLD FI
Sbjct: 319 DLRTGVEKNHVQSVLDGDLDDFI 341
>gi|373124608|ref|ZP_09538449.1| peptide chain release factor 2 [Erysipelotrichaceae bacterium 21_3]
gi|422326386|ref|ZP_16407414.1| peptide chain release factor 2 [Erysipelotrichaceae bacterium
6_1_45]
gi|371659576|gb|EHO24841.1| peptide chain release factor 2 [Erysipelotrichaceae bacterium 21_3]
gi|371665965|gb|EHO31122.1| peptide chain release factor 2 [Erysipelotrichaceae bacterium
6_1_45]
Length = 327
Score = 293 bits (751), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 150/324 (46%), Positives = 207/324 (63%), Gaps = 3/324 (0%)
Query: 123 NLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEA-L 181
+ W+DP HA + R+ + ++ + L+ + L +E+ D E+ E EA
Sbjct: 6 DFWNDPQHAQTLIRQLNGIKDIVESYEKLNSALIGLEETHDLLKEDYDDEI-FELFEAEY 64
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
L M + + E+ LLS E D S +E+ GAGGTES DWA M+ +MY WA+++G++V
Sbjct: 65 LEMEKNFDDFEIKILLSHEYDHSSAILELHPGAGGTESCDWADMLYRMYSRWAEKKGFKV 124
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
+++D +PG+ AGIK T V+G+ A+GY KAE GVHRLVRISPFDSG RRHTSFA++ V+
Sbjct: 125 SMLDYLPGDEAGIKSVTFLVEGDMAYGYLKAEKGVHRLVRISPFDSGGRRHTSFASLDVM 184
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P ++ ++I DL +E R+ GAGGQH N TDSAVR++H PTG+ ATCQN RSQH+
Sbjct: 185 PQF-NNEIEIEIKPEDLIVETKRASGAGGQHINKTDSAVRMVHKPTGLVATCQNGRSQHE 243
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
N+ A+ VL+SR+ Q I Q AE WG+QIR+YV HPY MVKD RT+ E
Sbjct: 244 NREEALRVLKSRLYQKMIEEQEARLAEIKGEQKANEWGSQIRSYVFHPYSMVKDHRTSCE 303
Query: 422 VSDPDSVLEGDLDGFILSYLSASL 445
SD V++GDLD FI +YL +
Sbjct: 304 TSDVQGVMDGDLDAFIFAYLKTQI 327
>gi|319795017|ref|YP_004156657.1| hypothetical protein Varpa_4378 [Variovorax paradoxus EPS]
gi|315597480|gb|ADU38546.1| hypothetical protein Varpa_4378 [Variovorax paradoxus EPS]
Length = 367
Score = 293 bits (751), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 153/344 (44%), Positives = 220/344 (63%), Gaps = 4/344 (1%)
Query: 99 IKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEH 158
+++ L + RL ++A L PN+W+DP A + RE SL + + L ++
Sbjct: 23 LRRYLDYDAKAERLRTVNASLEDPNVWNDPKKAQELGREKKSLDDVVVTLDRLTNGLSDN 82
Query: 159 IDMIKLAREENDTELELESL-EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGT 217
++ ++++EE D + L+S+ + T+ K+ E + + DP + ++++QAGAGGT
Sbjct: 83 SELFEMSKEEGDMD-GLQSISDDAATLEADIKQLEFRRMFNNPADPLNAFVDIQAGAGGT 141
Query: 218 ESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVH 277
E+ DWASM+L+ Y +A+R+G++ + DE PG+ AGIK ATIKV+G+YAFG + E GVH
Sbjct: 142 EACDWASMLLRQYLKYAERKGFKTQIEDETPGDTAGIKGATIKVEGDYAFGLLRTETGVH 201
Query: 278 RLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTD 337
RLVR SPFDS RHTSFA++ V P D S + IN SD+R + FR+ GAGGQH N TD
Sbjct: 202 RLVRKSPFDSSGGRHTSFASIFVYPEI-DDSIEIDINPSDVRTDTFRASGAGGQHINKTD 260
Query: 338 SAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDIS 397
SAVR+ HIPTGI CQ+ RSQH N+ A L+SR+ E+ ++ + + S TD+
Sbjct: 261 SAVRLTHIPTGIVVQCQDGRSQHSNRDVAWKRLRSRLYDHEMRKRQEEQQKLEDSKTDVG 320
Query: 398 WGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
WG+QIR+YVL R +KDLRTN EVS VL+GDLD FI + L
Sbjct: 321 WGHQIRSYVLDNSR-IKDLRTNVEVSATQKVLDGDLDVFIEASL 363
>gi|49485626|ref|YP_042847.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57650094|ref|YP_185692.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
COL]
gi|150393263|ref|YP_001315938.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
JH1]
gi|387142448|ref|YP_005730841.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
TW20]
gi|56749392|sp|Q6GB76.1|RF2_STAAS RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|56749443|sp|Q7A6R4.2|RF2_STAAN RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|56749454|sp|Q99VM1.2|RF2_STAAM RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|71153100|sp|Q5HHR5.1|RF2_STAAC RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|115311853|sp|Q2YSH5.2|RF2_STAAB RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|189040005|sp|A6TZN3.1|RF2_STAA2 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|49244069|emb|CAG42495.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57284280|gb|AAW36374.1| peptide chain release factor 2, programmed frameshift
[Staphylococcus aureus subsp. aureus COL]
gi|149945715|gb|ABR51651.1| hypothetical protein SaurJH1_0795 [Staphylococcus aureus subsp.
aureus JH1]
gi|269940331|emb|CBI48708.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
TW20]
Length = 369
Score = 293 bits (751), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 147/355 (41%), Positives = 219/355 (61%)
Query: 94 QSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQ 153
Q + I+ L +N + + +PN WD+ A I ++ +L + K +
Sbjct: 15 QDLTQIRGSLDLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQA 74
Query: 154 ELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAG 213
E+ + L +EE D E++ + + ++ + K E EL LL G D + +E+ G
Sbjct: 75 EVDDMDATWDLLQEEFDEEMKEDLEQEVINFKAKVDEYELQLLLDGPHDANNAILELHPG 134
Query: 214 AGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAE 273
AGGTES DWA+M+ +MY+ + +++G++V +D +PG+ AGIK T+ + G A+GY KAE
Sbjct: 135 AGGTESQDWANMLFRMYQRYCEKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAE 194
Query: 274 VGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHA 333
GVHRLVRISPFDS RRHTSFA+ VIP+ + ++IN D+ ++ FR+ GAGGQH
Sbjct: 195 KGVHRLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHI 254
Query: 334 NTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSL 393
N T+SA+RI H P+GI QNERSQ +N+ +AM +L+S++ QL++ QA+ AE
Sbjct: 255 NKTESAIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQ 314
Query: 394 TDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKD 448
+I WG+QIR+YV HPY MVKD RTN E D+V++GD+ FI SYL ++ D
Sbjct: 315 KEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYLRQTMSHD 369
>gi|406705909|ref|YP_006756262.1| peptide chain release factor 2 (bRF-2) [alpha proteobacterium
HIMB5]
gi|406651685|gb|AFS47085.1| bacterial peptide chain release factor 2 (bRF-2) [alpha
proteobacterium HIMB5]
Length = 327
Score = 293 bits (751), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 146/288 (50%), Positives = 203/288 (70%), Gaps = 3/288 (1%)
Query: 151 FEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEV 210
E EL + ++ LA E + E+ + L T+++ K+ E+ LS E D YIE+
Sbjct: 33 IENELKDAEELFDLANNEENLEILSDLTINLKTLKKTVKKNEIKCFLSNEADSLDTYIEI 92
Query: 211 QAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYA 270
AGAGGTES DWA M+ +MY WA R+ ++V L+ E G+ AGIK +TIK++G+Y FG+
Sbjct: 93 HAGAGGTESQDWAQMLRRMYIKWADRKKFKVGLISEHKGDEAGIKSSTIKIEGDYVFGWL 152
Query: 271 KAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGG 330
K E G+HRLVRISPFDSG RRHTSFA+V + P D + V+I E DLRI+ +RS GAGG
Sbjct: 153 KKESGIHRLVRISPFDSGARRHTSFASVWIYP-MVDENIKVEIQEKDLRIDTYRSSGAGG 211
Query: 331 QHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHT 390
QH NTTDSAVRI HIPT I CQNERSQH+NK + M +L++R+ EI ++ + +++T
Sbjct: 212 QHVNTTDSAVRITHIPTKIVVQCQNERSQHKNKETCMNMLKARLYDYEIKKKEE-ESQNT 270
Query: 391 QSL-TDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
+S+ ++I WG+QIR+YVL PY++VKD RTN+E + PD VL+G++D F+
Sbjct: 271 ESIKSEIGWGHQIRSYVLQPYQLVKDNRTNFENTSPDKVLDGEIDEFL 318
>gi|333372654|ref|ZP_08464578.1| peptide chain release factor RF2 [Desmospora sp. 8437]
gi|332971716|gb|EGK10664.1| peptide chain release factor RF2 [Desmospora sp. 8437]
Length = 331
Score = 293 bits (751), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 151/323 (46%), Positives = 208/323 (64%), Gaps = 1/323 (0%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
+ P W+D A ++ E+ L G ++ VK E+ E + +L EE+D + E+
Sbjct: 1 MTDPAFWNDQGKAQKVIDENNHLKGIVQGVKELEEAHEELQVIAELIAEEDDESMLPEAE 60
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
E L ++RK E EL LLS D S +E+ GAGGTES DWA ++L+MY WA+ RG
Sbjct: 61 EGLKDLKRKLDEFELSLLLSDPYDKNSAILELHPGAGGTESQDWAQILLRMYTRWAEHRG 120
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
Y+V +D +PGE AG+K T+ + G A+GY +AE GVHRLVRISPFDS RRHTSF +
Sbjct: 121 YKVETLDFLPGEEAGVKSVTLLIKGHNAYGYLRAEKGVHRLVRISPFDSSGRRHTSFVSA 180
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
V+P D +E D++I+ +RS GAGGQH NTTDSAVRI H+PT I TCQ+ERS
Sbjct: 181 NVMPEIEDDDEIEIRSE-DIKIDTYRSSGAGGQHVNTTDSAVRITHLPTNIVVTCQSERS 239
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
Q +N+ AM +L++R+ + ++ + + AE T+I WGNQIR+YV HPY MVKD RT
Sbjct: 240 QIKNRDRAMKILKARLVERQMEEKQKEIAELKGEQTEIGWGNQIRSYVFHPYSMVKDHRT 299
Query: 419 NYEVSDPDSVLEGDLDGFILSYL 441
EV + SV++G++D FI +YL
Sbjct: 300 QVEVGNVQSVVDGEIDTFIEAYL 322
>gi|451943524|ref|YP_007464160.1| peptide chain release factor 2 [Corynebacterium halotolerans YIM
70093 = DSM 44683]
gi|451902911|gb|AGF71798.1| peptide chain release factor 2 [Corynebacterium halotolerans YIM
70093 = DSM 44683]
Length = 369
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 156/350 (44%), Positives = 230/350 (65%), Gaps = 6/350 (1%)
Query: 91 AIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKA 150
A+ ++ I+K + + + R+ L A+ P+LWDDP HA +++ E S+ G+++++
Sbjct: 11 ALDATLTTIEKVMDPEEMAARVRELEAQAADPSLWDDPDHAQKVTSELSSVQGRLRKLSD 70
Query: 151 FEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEV 210
Q L + M +LA EE E E A +R + + E+ +LSG+ DP I +
Sbjct: 71 LRQRLSDLPVMYELAEEEEGGEELAEEERA--DLRAEIEALEVKTMLSGDYDPREALINI 128
Query: 211 QAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYA 270
++GAGG ++ DWA M+++MY WA++ G++V + D E AGIK AT V G+Y +G
Sbjct: 129 RSGAGGVDAADWAEMLMRMYTRWAEKHGHKVDVYDISYAEEAGIKSATFVVHGDYMYGQL 188
Query: 271 KAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGG 330
E G HRLVRISPFD+ RR TSFA V V+P + + H+ + ++D+R++ +RS G GG
Sbjct: 189 SVEQGAHRLVRISPFDNQGRRQTSFAEVEVLPVV-EQTDHIDVPDNDVRVDVYRSSGPGG 247
Query: 331 QHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSR-VNQLEIARQAQMNAEH 389
Q NTTDSAVR+ HIPTGI TCQNE+SQ QNKASAM VLQ++ + + + +A+M+A
Sbjct: 248 QSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLQAKLLEKKRLEERAEMDA-- 305
Query: 390 TQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILS 439
+ SWGNQ+R+YVLHPY+MVKDLRTN+EV+DP VL+G++DGF+ S
Sbjct: 306 LGAGGHASWGNQMRSYVLHPYQMVKDLRTNFEVNDPSKVLDGEIDGFLES 355
>gi|49483011|ref|YP_040235.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|56749421|sp|Q6GIN7.1|RF2_STAAR RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|49241140|emb|CAG39818.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
MRSA252]
Length = 369
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 147/355 (41%), Positives = 219/355 (61%)
Query: 94 QSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQ 153
Q + I+ L +N + + +PN WD+ A I ++ +L + K +
Sbjct: 15 QDLTQIRGSLDLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQA 74
Query: 154 ELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAG 213
E+ + L +EE D E++ + + ++ + K E EL LL G D + +E+ G
Sbjct: 75 EVDDMDATWDLLQEEFDGEMKEDLEQEVINFKAKVDEYELQLLLDGPHDANNAILELHPG 134
Query: 214 AGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAE 273
AGGTES DWA+M+ +MY+ + +++G++V +D +PG+ AGIK T+ + G A+GY KAE
Sbjct: 135 AGGTESQDWANMLFRMYQRYCEKKGFKVKTVDYLPGDEAGIKSVTLLIKGHNAYGYLKAE 194
Query: 274 VGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHA 333
GVHRLVRISPFDS RRHTSFA+ VIP+ + ++IN D+ ++ FR+ GAGGQH
Sbjct: 195 KGVHRLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHI 254
Query: 334 NTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSL 393
N T+SA+RI H P+GI QNERSQ +N+ +AM +L+S++ QL++ QA+ AE
Sbjct: 255 NKTESAIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQ 314
Query: 394 TDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKD 448
+I WG+QIR+YV HPY MVKD RTN E D+V++GD+ FI SYL ++ D
Sbjct: 315 KEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYLRQTMSHD 369
>gi|90580579|ref|ZP_01236384.1| putative peptide chain release factor 2 [Photobacterium angustum
S14]
gi|90438237|gb|EAS63423.1| putative peptide chain release factor 2 [Photobacterium angustum
S14]
Length = 353
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 146/335 (43%), Positives = 218/335 (65%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++AEL +P++W++P A + +E SL ++ + +Q + + +++LA EEND
Sbjct: 21 RLEEVNAELEQPDVWNEPDRAQALGKERASLEAVVETIDLLDQGVEDVEGLLELAVEEND 80
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
E E L + K + E + +G+ D CY+++QAG+GGTE+ DW SM+L+MY
Sbjct: 81 QETFDEIEPELAELEAKLAKLEFRRMFAGDHDASDCYLDLQAGSGGTEAQDWTSMMLRMY 140
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA +G++ +++ G++AG+K T+++ GEYA+G+ + E GVHRLVR SPFDSG R
Sbjct: 141 LRWADAKGFKTEIIEISDGDVAGLKSVTVRISGEYAYGWLRTETGVHRLVRKSPFDSGGR 200
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSFA+ V P D+ + IN SDLRI+ +R+ GAGGQH NTT+SAVRI H+PT I
Sbjct: 201 RHTSFASAFVYPEIDDNIV-IDINPSDLRIDVYRASGAGGQHVNTTESAVRITHLPTNIV 259
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+NK AM L++++ + E+ +Q + +DI WG+QIR+YVL
Sbjct: 260 VQCQNDRSQHKNKDQAMKQLKAKLFEYEMQKQNAEKQASEDTKSDIGWGSQIRSYVLDDS 319
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E + +VL+GDLD FI + L + L
Sbjct: 320 R-IKDLRTGVENRNTQAVLDGDLDRFIEASLKSGL 353
>gi|15617035|ref|NP_240248.1| peptide chain release factor 2 [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219681787|ref|YP_002468173.1| peptide chain release factor 2 [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|257471489|ref|ZP_05635488.1| peptide chain release factor 2 [Buchnera aphidicola str. LSR1
(Acyrthosiphon pisum)]
gi|414562791|ref|YP_005617982.1| peptide chain release factor 2 [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
gi|25299669|pir||F84980 peptide chain release factor 2 [imported] - Buchnera sp. (strain
APS)
gi|10039100|dbj|BAB13134.1| peptide chain release factor 2 [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219624630|gb|ACL30785.1| peptide chain release factor 2 [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|311087327|gb|ADP67407.1| peptide chain release factor 2 [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
Length = 349
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 138/323 (42%), Positives = 214/323 (66%), Gaps = 2/323 (0%)
Query: 115 LSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELE 174
+ EL+ P W + + ++++E L ++ + E+ + E + ++LA E D +
Sbjct: 21 IDLELSSPKTWTEQISIKKLNKEKYLLNSIIQNINEIEENIKEVVIFLELAIETQDNLVF 80
Query: 175 LESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWA 234
ESL + + ++ K+ E + S + D CYI++Q+G+GGT++ DW+ M+L+MY WA
Sbjct: 81 KESLLEIQKIEQEIKKLEFYRMFSKKNDHYDCYIDIQSGSGGTDAQDWSKMLLRMYLRWA 140
Query: 235 QRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTS 294
++G+ ++DE GEI GIK +TIKV GEYAFG+ + E G+HRL+R SPFDSGKRRHTS
Sbjct: 141 DKKGFHTEIIDESIGEIVGIKSSTIKVSGEYAFGWFRTETGIHRLIRKSPFDSGKRRHTS 200
Query: 295 FAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQ 354
F+++ + P+ + + IN SDLRI+ +R+ GAGGQH N T+SAVRI H+PT I CQ
Sbjct: 201 FSSIFIYPDINE-KIDININYSDLRIDVYRASGAGGQHVNRTESAVRITHLPTNIVTQCQ 259
Query: 355 NERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVK 414
N RSQH+NK AM +QS++ ++++ ++ + + Q+ +DI+WGNQIR+Y+L + +K
Sbjct: 260 NNRSQHKNKEQAMKQMQSKLYEIQMRKKQEEKQKIEQNKSDITWGNQIRSYILDNSK-IK 318
Query: 415 DLRTNYEVSDPDSVLEGDLDGFI 437
DLRT E + SVL+GDLD FI
Sbjct: 319 DLRTGVEKNHVQSVLDGDLDDFI 341
>gi|423713848|ref|ZP_17688108.1| peptide chain release factor 2 [Bartonella vinsonii subsp.
arupensis OK-94-513]
gi|395421654|gb|EJF87890.1| peptide chain release factor 2 [Bartonella vinsonii subsp.
arupensis OK-94-513]
Length = 322
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 148/307 (48%), Positives = 212/307 (69%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + +++F + L E I++I++ EE+D E+ ++ ++ ++ + ++++D
Sbjct: 3 RERQRLDDSINGIRSFTKTLEECIELIEMGEEESDVEIITDAENSIRNLKNEIDKRQIDV 62
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+EV AGAGGTES DWASM+L+MY WA++ +V L++ GE AGIK
Sbjct: 63 LLSGEADQNDTYLEVHAGAGGTESQDWASMLLRMYTRWAEQHKMKVDLLEIHDGEEAGIK 122
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI V G A+G K E GVHRLVRISPFDS +RHTSFA++ V P D + V ++E
Sbjct: 123 SATILVKGHNAYGMLKTESGVHRLVRISPFDSNAKRHTSFASIWVYP-VIDDNIEVDVSE 181
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
+D+RI+ +R+ GAGGQH NTTDSAVRI HI TGI CQ ERSQH+N+A+A +L++R+
Sbjct: 182 ADVRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNRATAWSMLRARLY 241
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ ++ + S T+I WG+QIR+YVL PY++VKDLRT E +DP SVL G+LD
Sbjct: 242 EEELKKREEETNVVEASKTEIGWGHQIRSYVLQPYQLVKDLRTGVENTDPQSVLNGNLDA 301
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 302 FVEAALA 308
>gi|303257507|ref|ZP_07343519.1| peptide chain release factor 2 [Burkholderiales bacterium 1_1_47]
gi|302859477|gb|EFL82556.1| peptide chain release factor 2 [Burkholderiales bacterium 1_1_47]
Length = 348
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 149/332 (44%), Positives = 220/332 (66%), Gaps = 4/332 (1%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++ L P++W D A ++S+E L + +K L + +++ ++A+EE+D
Sbjct: 16 RLEEVNQALEDPSIWSDQERAQQLSKEKKRLEDVVLTIKHLTTGLSDALELFEMAKEEDD 75
Query: 171 TELELESLEALLTMRRKSKEK-ELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
+ LE++EA + +K E E + + E D +C++E+QAGAGGTE+ DWASM+ +M
Sbjct: 76 -DASLEAVEADINNLKKEVEHLEFQRMFNQEHDEANCFLEIQAGAGGTEAQDWASMLERM 134
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y +A+R+ ++ +++E G++AGIK TIK+ G+YA+G+ + E G+HRLVR SPFDS
Sbjct: 135 YIKFAERQSFKPEIVEETEGDVAGIKGCTIKITGDYAYGWLRTETGIHRLVRKSPFDSNA 194
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RRHTSFA+V V+P D S +++N +DLRI+ FR+ GAGGQH TDSAVRI HIPTGI
Sbjct: 195 RRHTSFASVFVVPEV-DDSFEIEVNPADLRIDTFRASGAGGQHIQKTDSAVRITHIPTGI 253
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHP 409
A Q RSQHQNK AM +L+SR+ + E+ ++ + +DISWG+QIR+YVL
Sbjct: 254 VAVSQTSRSQHQNKEEAMTILKSRLYEAELRKRQATQQALEDNKSDISWGHQIRSYVLDQ 313
Query: 410 YRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
R VKDLRTN E + +VL+G L+ FI + L
Sbjct: 314 SR-VKDLRTNVETGNTTAVLDGALESFIEASL 344
>gi|152980486|ref|YP_001352951.1| peptide chain release factor 2 [Janthinobacterium sp. Marseille]
gi|166223628|sp|A6SXF4.1|RF2_JANMA RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|151280563|gb|ABR88973.1| RF-2 peptide chain release factor [Janthinobacterium sp. Marseille]
Length = 367
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 143/343 (41%), Positives = 225/343 (65%), Gaps = 2/343 (0%)
Query: 99 IKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEH 158
+++ L + + +L+ ++ EL P++W+D A + +E SL + + + EL +
Sbjct: 23 LRRYLDFDVKSEKLDQVNGELEDPDVWNDQKRAQDLGKEKKSLEAIVHTLIKIDSELNDA 82
Query: 159 IDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTE 218
D+ ++AREE D + + + + + E + S +D +C+I++QAGAGGTE
Sbjct: 83 RDLFEMAREEKDEDTIVAIENDAQELLKLVEGMEFRRMFSNPMDANNCFIDIQAGAGGTE 142
Query: 219 SMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHR 278
+ DWASM+L+ Y + +R+G++V ++++ GE+AGIK AT+KV+G+YA+G+ + E GVHR
Sbjct: 143 AQDWASMLLRQYLRYCERKGFKVEILEQSDGEVAGIKTATLKVEGDYAYGFLRTETGVHR 202
Query: 279 LVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDS 338
LVR SPFDS RHTSF+++ V P D S + IN +D+RI+ +R+ GAGGQH N TDS
Sbjct: 203 LVRKSPFDSANGRHTSFSSLFVYPEV-DDSIEIDINPADVRIDTYRASGAGGQHINKTDS 261
Query: 339 AVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISW 398
AVR+ H P+GI CQN+RSQH+NKA A +L++++ +LE+ + + S TD+ W
Sbjct: 262 AVRLTHGPSGIVVQCQNDRSQHRNKAEAWDMLKAKLFELEMRNRMSEQQKLEDSKTDVGW 321
Query: 399 GNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
G+QIR+YVL R +KDLRTN+E + +VL+GDLD FI + L
Sbjct: 322 GHQIRSYVLDQSR-IKDLRTNFETGNTKAVLDGDLDDFIAASL 363
>gi|126434177|ref|YP_001069868.1| peptide chain release factor 2 [Mycobacterium sp. JLS]
gi|166225109|sp|A3PWV0.1|RF2_MYCSJ RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|126233977|gb|ABN97377.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium sp.
JLS]
Length = 371
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 155/360 (43%), Positives = 222/360 (61%), Gaps = 11/360 (3%)
Query: 84 DWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
D ++ AA+A ++ +++ L L R+ L E + PNLWDD A +++ E
Sbjct: 4 DRQADIAALAATLTTVERVLDVDGLRDRIQKLEQEASDPNLWDDQSRAQKVTSELSHAQN 63
Query: 144 KMKEVKAFEQELLEHIDMIKLAREENDTELELESLEA---LLTMRRKSKEKELDALLSGE 200
+++ V+ Q + + + ++A EE + E EA L +R + E+ LLSGE
Sbjct: 64 ELRRVEELRQRVEDLPVLYEMAAEEEGQDAENAGAEADAELAKLRVDIEAMEVRTLLSGE 123
Query: 201 LDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIK 260
D + +++GAGG ++ DWA M+++MY WA++ Y V + D E AGIK AT
Sbjct: 124 YDEREAVVTIRSGAGGVDAADWAEMLMRMYIRWAEQHDYPVEVFDTSYAEEAGIKSATFA 183
Query: 261 VDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRI 320
V YA+G E G HRLVRISPFD+ RR TSFA V V+P +++ H+ + E+DLR+
Sbjct: 184 VHAPYAYGTLSVEQGTHRLVRISPFDNQSRRQTSFADVEVLPVV-ETTDHIDVPETDLRV 242
Query: 321 ERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIA 380
+ +RS G GGQ NTTDSAVR+ HIPTGI TCQNE+SQ QNK +AM VLQ+++ +A
Sbjct: 243 DVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMRVLQAKL----LA 298
Query: 381 RQAQMNAEHTQSLT---DISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
R+ Q +L SWGNQ+R+YVLHPY+MVKDLRT YEV +P +VL+GD+DGF+
Sbjct: 299 RKKQEERAALDALKGDGGSSWGNQMRSYVLHPYQMVKDLRTEYEVGNPSAVLDGDIDGFL 358
>gi|300704641|ref|YP_003746244.1| peptide chain release factor rf-2; programmed frameshift, partial
[Ralstonia solanacearum CFBP2957]
gi|299072305|emb|CBJ43638.1| peptide chain release factor RF-2; programmed frameshift [Ralstonia
solanacearum CFBP2957]
Length = 300
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 145/296 (48%), Positives = 210/296 (70%), Gaps = 12/296 (4%)
Query: 151 FEQELLEHIDMIKLAREENDTELELESLEALLT----MRRKSKEKELDALLSGELDPCSC 206
+++L ++ +LAREE D + ++EA+ T MR ++ E + SG +D +C
Sbjct: 8 LDEDLTGGAELFELAREEGDDD----TIEAIETDTAGMRAIVEDMEFRRMFSGPMDAANC 63
Query: 207 YIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYA 266
+I++QAGAGGTE+ DWASM+L+ Y + +R+G++ +++E G++AGIK A+IKV+GEYA
Sbjct: 64 FIDIQAGAGGTEACDWASMLLRQYLKYCERKGFKAEVLEESEGDVAGIKSASIKVEGEYA 123
Query: 267 FGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSG 326
FG+ + E GVHRLVR SPFDS RHTSF+++ V P D S +++N +DLR++ +R+
Sbjct: 124 FGFLRTETGVHRLVRKSPFDSAGGRHTSFSSIFVYPEV-DDSIEIEVNPADLRVDTYRAS 182
Query: 327 GAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMN 386
GAGGQH N TDSAVRI HIPTGI CQN+RSQH+N+A AM +L+SR+ + E+ R+ Q
Sbjct: 183 GAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHEL-RKRQAE 241
Query: 387 AEHTQ-SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
A+ + S TD+ WG+QIR+YVL R +KDLRTN E+S+ VL+GDLD FI + L
Sbjct: 242 ADKLEASKTDVGWGHQIRSYVLDQSR-IKDLRTNVEISNTQKVLDGDLDAFIQASL 296
>gi|163816074|ref|ZP_02207444.1| hypothetical protein COPEUT_02254 [Coprococcus eutactus ATCC 27759]
gi|158448884|gb|EDP25879.1| peptide chain release factor 2 [Coprococcus eutactus ATCC 27759]
Length = 370
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 150/358 (41%), Positives = 230/358 (64%), Gaps = 1/358 (0%)
Query: 84 DWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
++++ A+ + ++ +K L +N R+ L+ E+ +P+ WDD + +SRE +L
Sbjct: 6 EFRAAMASYKEPLEEVKSSLDIENKTDRIAKLNYEMEQPSFWDDVDRSREVSRELKNLQD 65
Query: 144 KMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDP 203
+ K E + L+ +I +A EEND+ L E E + +++ +E ++ L + E D
Sbjct: 66 LVDNYKKLENDYLDIDTLILMAEEENDSSLIPEIGEQIDIFKKEFEEYRINLLFTDEFDD 125
Query: 204 CSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDG 263
C+ + + +G GGTES DWASM+ +MY WA++ G V ++D + G+ AGIK TI+++G
Sbjct: 126 CNAVLTLHSGEGGTESCDWASMLYRMYTRWAEKHGMSVEVLDFLEGDEAGIKSVTIQING 185
Query: 264 EYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERF 323
+A+GY K+E GVHRLVRISPF+S +R TSFA+ VIP+ + ++I + D+RI+ +
Sbjct: 186 PHAYGYLKSEKGVHRLVRISPFNSAGKRMTSFASCDVIPDI-EQDLEIEIRDEDIRIDTY 244
Query: 324 RSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQA 383
RS GAGGQH N T SA+RI H PTGI CQNERSQ NK AM +L+S++ L+
Sbjct: 245 RSSGAGGQHINKTSSAIRITHFPTGIVVQCQNERSQLMNKNKAMQMLKSKLYLLKKQENL 304
Query: 384 QMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
+ ++ +TD +G+QIR+YVL PY MVKD RT+YE S+ +VL+GDLDGF+ +YL
Sbjct: 305 ERISDIRGEVTDNGFGSQIRSYVLQPYTMVKDKRTSYENSNVSAVLDGDLDGFMTAYL 362
>gi|219682342|ref|YP_002468726.1| peptide chain release factor 2 [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|219622075|gb|ACL30231.1| peptide chain release factor 2 [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
Length = 349
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 138/323 (42%), Positives = 214/323 (66%), Gaps = 2/323 (0%)
Query: 115 LSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELE 174
+ EL+ P W + + ++++E L ++ + E+ + E + ++LA E D +
Sbjct: 21 IDLELSSPKTWTEQISIKKLNKEKYLLNSIIQNINEIEENIKEVVIFLELAIETQDNLVF 80
Query: 175 LESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWA 234
ESL + + ++ K+ E + S + D CYI++Q+G+GGT++ DW+ M+L+MY WA
Sbjct: 81 KESLLEIQKIEQEIKKLEFYRMFSKKDDHYDCYIDIQSGSGGTDAQDWSKMLLRMYLRWA 140
Query: 235 QRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTS 294
++G+ ++DE GEI GIK +TIKV GEYAFG+ + E G+HRL+R SPFDSGKRRHTS
Sbjct: 141 DKKGFHTEIIDESIGEIVGIKSSTIKVSGEYAFGWFRTETGIHRLIRKSPFDSGKRRHTS 200
Query: 295 FAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQ 354
F+++ + P+ + + IN SDLRI+ +R+ GAGGQH N T+SAVRI H+PT I CQ
Sbjct: 201 FSSIFIYPDINE-KIDININYSDLRIDVYRASGAGGQHVNRTESAVRITHLPTNIVTQCQ 259
Query: 355 NERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVK 414
N RSQH+NK AM +QS++ ++++ ++ + + Q+ +DI+WGNQIR+Y+L + +K
Sbjct: 260 NNRSQHKNKEQAMKQMQSKLYEIQMRKKQEEKQKIEQNKSDITWGNQIRSYILDNSK-IK 318
Query: 415 DLRTNYEVSDPDSVLEGDLDGFI 437
DLRT E + SVL+GDLD FI
Sbjct: 319 DLRTGVEKNHVQSVLDGDLDDFI 341
>gi|89072535|ref|ZP_01159107.1| putative peptide chain release factor 2 [Photobacterium sp. SKA34]
gi|89051639|gb|EAR57092.1| putative peptide chain release factor 2 [Photobacterium sp. SKA34]
Length = 353
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 146/335 (43%), Positives = 218/335 (65%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++AEL +P++W++P A + +E SL ++ + +Q + + +++LA EEND
Sbjct: 21 RLEEVNAELEQPDVWNEPDRAQALGKERSSLEAVVETIDLLDQGVEDVEGLLELAVEEND 80
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
E E L + K + E + +G+ D CY+++QAG+GGTE+ DW SM+L+MY
Sbjct: 81 QETFDEIEPELAELEAKLAKLEFRRMFAGDHDASDCYLDLQAGSGGTEAQDWTSMMLRMY 140
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA +G++ +++ G++AG+K T+++ GEYA+G+ + E GVHRLVR SPFDSG R
Sbjct: 141 LRWADAKGFKTEIIEISDGDVAGLKSVTVRISGEYAYGWLRTETGVHRLVRKSPFDSGGR 200
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSFA+ V P D+ + IN SDLRI+ +R+ GAGGQH NTT+SAVRI H+PT I
Sbjct: 201 RHTSFASAFVYPEIDDNIV-IDINPSDLRIDVYRASGAGGQHVNTTESAVRITHLPTNIV 259
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+NK AM L++++ + E+ +Q + +DI WG+QIR+YVL
Sbjct: 260 VQCQNDRSQHKNKDQAMKQLKAKLFEYEMQKQNAEKQASEDTKSDIGWGSQIRSYVLDDS 319
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E + +VL+GDLD FI + L + L
Sbjct: 320 R-IKDLRTGVENRNTQAVLDGDLDRFIEASLKSGL 353
>gi|386830396|ref|YP_006237050.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
HO 5096 0412]
gi|385195788|emb|CCG15397.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
HO 5096 0412]
Length = 369
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 147/355 (41%), Positives = 219/355 (61%)
Query: 94 QSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQ 153
Q + I+ L +N + + +PN WD+ A I ++ +L + K +
Sbjct: 15 QDLTQIRGSLDLENKETNIQEYEEMMAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQA 74
Query: 154 ELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAG 213
E+ + L +EE D E++ + + ++ + K E EL LL G D + +E+ G
Sbjct: 75 EVDDMDATWDLLQEEFDEEMKEDLEQEVIYFKAKVDEYELQLLLDGPHDANNAILELHPG 134
Query: 214 AGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAE 273
AGGTES DWA+M+ +MY+ + +++G++V +D +PG+ AGIK T+ + G A+GY KAE
Sbjct: 135 AGGTESQDWANMLFRMYQRYCEKKGFKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAE 194
Query: 274 VGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHA 333
GVHRLVRISPFDS RRHTSFA+ VIP+ + ++IN D+ ++ FR+ GAGGQH
Sbjct: 195 KGVHRLVRISPFDSSGRRHTSFASCDVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHI 254
Query: 334 NTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSL 393
N T+SA+RI H P+GI QNERSQ +N+ +AM +L+S++ QL++ QA+ AE
Sbjct: 255 NKTESAIRITHHPSGIVVNNQNERSQIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQ 314
Query: 394 TDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKD 448
+I WG+QIR+YV HPY MVKD RTN E D+V++GD+ FI SYL ++ D
Sbjct: 315 KEIGWGSQIRSYVFHPYSMVKDHRTNEETGKVDAVMDGDIGPFIESYLRQTMSHD 369
>gi|323486370|ref|ZP_08091695.1| hypothetical protein HMPREF9474_03446 [Clostridium symbiosum
WAL-14163]
gi|323695006|ref|ZP_08109153.1| peptide chain release factor 2 [Clostridium symbiosum WAL-14673]
gi|355624996|ref|ZP_09047980.1| peptide chain release factor 2 [Clostridium sp. 7_3_54FAA]
gi|323400352|gb|EGA92725.1| hypothetical protein HMPREF9474_03446 [Clostridium symbiosum
WAL-14163]
gi|323500950|gb|EGB16865.1| peptide chain release factor 2 [Clostridium symbiosum WAL-14673]
gi|354821641|gb|EHF06026.1| peptide chain release factor 2 [Clostridium sp. 7_3_54FAA]
Length = 335
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 142/323 (43%), Positives = 212/323 (65%), Gaps = 1/323 (0%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
+ +P WDDP + + RE +L ++ + EQ+ + MI++ EEND + E
Sbjct: 1 MEEPGFWDDPERSTKTVREAKNLKDTVETYRHLEQQYEDIQIMIEMGYEENDPSMIPEIQ 60
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
E L ++ LLSGE D C+ +++ AGAGGTE+MDW SM+ +MY+ WA ++G
Sbjct: 61 EMLDEFINSLEDIRTKTLLSGEYDNCNAILKLNAGAGGTEAMDWCSMLYRMYQRWADKKG 120
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
Y ++D + G+ AGIK T++++GE AFGY K+E GVHRLVRISPF++ +R TSF +
Sbjct: 121 YTTEVLDFLDGDEAGIKSITVQINGENAFGYLKSEKGVHRLVRISPFNAAGKRQTSFVSC 180
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
V+P+ + +++N+ DLRI+ +RS GAGGQH N T SA+RI HIPTGI CQNERS
Sbjct: 181 DVMPDI-EEDLDIEVNQDDLRIDTYRSSGAGGQHINKTSSAIRITHIPTGIVVQCQNERS 239
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
Q QNK AM +L++++ L+ A+ ++ + DI++GNQIR+YV+ PY +VKD RT
Sbjct: 240 QFQNKDKAMQMLKAKLYLLKQQENAEKLSDIRGDVKDINFGNQIRSYVMQPYTLVKDHRT 299
Query: 419 NYEVSDPDSVLEGDLDGFILSYL 441
N E + ++V++GD+D FI +YL
Sbjct: 300 NAENGNVNAVMDGDIDLFISAYL 322
>gi|415719555|ref|ZP_11467715.1| peptide chain release factor 2 [Gardnerella vaginalis 1500E]
gi|388059080|gb|EIK81840.1| peptide chain release factor 2 [Gardnerella vaginalis 1500E]
Length = 380
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 148/339 (43%), Positives = 219/339 (64%), Gaps = 2/339 (0%)
Query: 99 IKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEH 158
I+K L +L + L + +P LWDD HA +++ + + ++K ++A +Q + +
Sbjct: 20 IEKALDVDSLKATIADLEKQAAEPGLWDDSEHAQQVTSKLSAAQSQLKRLQAVDQRIEDT 79
Query: 159 IDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTE 218
+I+L +EE D + E+ E L ++ + + E+ LL GE D S + +++GAGG +
Sbjct: 80 KTLIELGQEEGDADSMSEAQEELGSIAHELDDMEVQTLLDGEYDARSAVVTIRSGAGGVD 139
Query: 219 SMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHR 278
+ D+A M+L+MY WA+R GY+ +MD E AGIK AT +VD YA+G E G HR
Sbjct: 140 AADFAQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTHR 199
Query: 279 LVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDS 338
+VRISPFD+ RR T F+AV VIP +++ H+ I +SD+R++ F++ G GGQ NTT S
Sbjct: 200 MVRISPFDNQGRRQTGFSAVEVIPLV-EATDHIDIPDSDIRVDTFQASGPGGQGVNTTYS 258
Query: 339 AVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISW 398
AVRI H+PTG+ + Q+ERSQ QN+A+AM VLQSR+ L+ A +A E + SW
Sbjct: 259 AVRITHLPTGLVVSMQDERSQIQNRAAAMAVLQSRLLVLKHAEEAAKKKELAGDIK-ASW 317
Query: 399 GNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
G+Q+R+YVLHPY+MVKDLRT YE S +V +GD+DGFI
Sbjct: 318 GDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFI 356
>gi|239828320|ref|YP_002950944.1| hypothetical protein GWCH70_3007 [Geobacillus sp. WCH70]
gi|239808613|gb|ACS25678.1| hypothetical protein GWCH70_3007 [Geobacillus sp. WCH70]
Length = 367
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 153/361 (42%), Positives = 223/361 (61%), Gaps = 3/361 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
K +A+ + I+ L + R+ L ++ PN WDD A + E +L +
Sbjct: 8 KQELEKMAKRLAEIRGSLDLETKQARIRELEEQMAAPNFWDDQKAAQTVINEANALKDLV 67
Query: 146 KEVKAFEQELLEHIDMI-KLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPC 204
E ++ E E E++++ +L +EE D +L+ E + + + E EL LL+ D
Sbjct: 68 GEFQSLE-ERFENLEVTYELIKEEPDEDLQQELVAEAKKLTKDFSEFELQLLLNEPYDKN 126
Query: 205 SCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGE 264
+ +E+ GAGGTES DWASM+L+MY WA+++G++V +D +PGE AG+K T+ + G
Sbjct: 127 NAILELHPGAGGTESQDWASMLLRMYTRWAEKKGFKVETLDYLPGEEAGVKSVTLLIKGH 186
Query: 265 YAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFR 324
A+GY KAE GVHRLVRISPFD+ RRHTSF + V+P D E ++++ +R
Sbjct: 187 NAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSCEVMPEMDDDIEIEIRPEE-IKVDTYR 245
Query: 325 SGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQ 384
S GAGGQH NTTDSAVRI HIPTGI TCQ+ERSQ +N+ AM +L++++ Q ++ Q
Sbjct: 246 SSGAGGQHVNTTDSAVRITHIPTGIVVTCQSERSQIKNREKAMNMLKAKLYQKKLEEQQA 305
Query: 385 MNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSAS 444
AE +I WGNQIR+YV HPY +VKD RTN EV + +V++G++D FI +YL +
Sbjct: 306 ELAEIRGEQKEIGWGNQIRSYVFHPYSLVKDHRTNVEVGNVQAVMDGEIDIFIDAYLRSK 365
Query: 445 L 445
L
Sbjct: 366 L 366
>gi|163846312|ref|YP_001634356.1| peptide chain release factor 2 [Chloroflexus aurantiacus J-10-fl]
gi|222524073|ref|YP_002568544.1| peptide chain release factor 2 [Chloroflexus sp. Y-400-fl]
gi|163667601|gb|ABY33967.1| peptide chain release factor 2 [Chloroflexus aurantiacus J-10-fl]
gi|222447952|gb|ACM52218.1| peptide chain release factor 2 [Chloroflexus sp. Y-400-fl]
Length = 313
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 146/295 (49%), Positives = 203/295 (68%), Gaps = 1/295 (0%)
Query: 151 FEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEV 210
E+ + ++I+LA E D L + + ++R+ ++EL+ LLSG D ++ V
Sbjct: 17 LERRIASAAELIELAELEGDESLTADLAAEVQAIQREVAQRELEILLSGPYDDRDAFLSV 76
Query: 211 QAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYA 270
QAG GGT++ DWA+M+L+MY WA+RRGY V L+D GE AGIK ATI++ G YA+GYA
Sbjct: 77 QAGMGGTDAQDWAAMLLRMYTRWAERRGYTVNLIDMSEGEEAGIKSATIEIRGPYAYGYA 136
Query: 271 KAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGG 330
+AE GVHRL+R+SPF++ R TSFA V V+P D + V+I DLRI+ FRSGG GG
Sbjct: 137 RAEAGVHRLIRLSPFNAAHTRQTSFARVEVMPEV-DDAPEVEIKPEDLRIDVFRSGGHGG 195
Query: 331 QHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHT 390
Q NTTDSAVRI H+PTGI TCQNERSQ QN+ AM VL++R+ + E+ RQA+ A
Sbjct: 196 QGVNTTDSAVRITHLPTGIVVTCQNERSQIQNRELAMRVLRARLLERELQRQAEERARLR 255
Query: 391 QSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ ++GNQ+RTY LHP +VKD RT+YE S+ +VL+G++D FI ++L A++
Sbjct: 256 GEYREAAFGNQMRTYYLHPSTLVKDHRTDYETSNVQAVLDGEIDPFIEAFLRANV 310
>gi|237807749|ref|YP_002892189.1| peptide chain release factor 2 [Tolumonas auensis DSM 9187]
gi|259585231|sp|C4LCN9.1|RF2_TOLAT RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|237500010|gb|ACQ92603.1| hypothetical protein Tola_0975 [Tolumonas auensis DSM 9187]
Length = 365
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 150/354 (42%), Positives = 219/354 (61%), Gaps = 2/354 (0%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
+++ ++++ L + RL +SAEL +P +W++P A + +E +L + +
Sbjct: 14 LSERTELLRGYLDYDAKKERLEEVSAELEQPEVWNEPERAQALGKERSALESVVATIDVL 73
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
Q + ++ LA E D E E+ + +K + E + SG+ D CY+++Q
Sbjct: 74 TQGAEDVEMLVSLAVEGEDEETFHEAETEADALEKKLVDLEFRRMFSGQHDASDCYMDIQ 133
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
+G+GGTE+ DWA MVL+MY W + GY+ L++ G++AGIK ATIK GEYAFG+ +
Sbjct: 134 SGSGGTEAQDWADMVLRMYLRWGEAHGYKPELIECSDGDVAGIKSATIKFTGEYAFGWLR 193
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
E GVHRLVR SPFDSG RRHTSF + V P D ++IN +DLRI+ +R+ GAGGQ
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFCSAFVYPEI-DEDVEIEINPADLRIDVYRASGAGGQ 252
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQ 391
H N T+SAVRI HIPT CQN+RSQH+NK AM L++++ +LE+ +Q +
Sbjct: 253 HVNRTESAVRITHIPTNTVTQCQNDRSQHKNKDQAMKQLKAKLYELEMMKQNAEKQALEE 312
Query: 392 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ +DI WG+QIR+YVL R +KDLRT E + SVL+GDLD FI + L + L
Sbjct: 313 TKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQSVLDGDLDKFIEASLKSGL 365
>gi|154250427|ref|YP_001411252.1| peptide chain release factor 2 [Fervidobacterium nodosum Rt17-B1]
gi|154154363|gb|ABS61595.1| peptide chain release factor 2 [Fervidobacterium nodosum Rt17-B1]
Length = 364
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 153/331 (46%), Positives = 221/331 (66%), Gaps = 11/331 (3%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSL---MGKMKEVKAFEQELLEHIDM-IKLAR 166
+L L +E KP+ W+D A +I+RE + + M+++K L E I++ I+LA
Sbjct: 27 KLKELESETLKPDFWNDQKKAQQINREIQRIRRIVEDMEKIKV----LFEDIEVGIELAE 82
Query: 167 EENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMV 226
E+ + LE + + + K +E EL +L+G+ D + Y+ + GAGGTES DWASM+
Sbjct: 83 EDPSMQEHLEQI--VDEVGEKIREFELALILNGKFDGSNAYLSIHPGAGGTESQDWASML 140
Query: 227 LQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFD 286
L+MY WA+R+G+ V L+D GE AGIK AT+ + G++A+GY K E GVHRLVRISPFD
Sbjct: 141 LRMYMRWAERKGFSVELVDYQEGEEAGIKSATLYIKGDFAYGYLKYERGVHRLVRISPFD 200
Query: 287 SGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIP 346
+ KRRHTSFA+V V+P D E DLR++ +R+ GAGGQ+ N T+SA+RI H+P
Sbjct: 201 ANKRRHTSFASVNVLPEIEDDIDIEIRPE-DLRVDTYRASGAGGQYVNKTESAIRITHLP 259
Query: 347 TGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYV 406
TGI TCQ ERSQ QN+ +AM +L++R+ QLE+ ++ + + L DISWGNQIR+YV
Sbjct: 260 TGIVVTCQTERSQLQNRETAMKMLKARLYQLELEKRRKQIEQIQGELRDISWGNQIRSYV 319
Query: 407 LHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
PY MVKD RT+ E + ++V++G++D FI
Sbjct: 320 FQPYTMVKDHRTDVETGNIEAVMDGEIDMFI 350
>gi|20663625|pdb|1GQE|A Chain A, Polypeptide Chain Release Factor 2 (Rf2) From Escherichia
Coli
Length = 365
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 148/348 (42%), Positives = 219/348 (62%), Gaps = 2/348 (0%)
Query: 98 VIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLE 157
V++ L + RL ++AEL +P++W++P A + +E SL + + +Q L +
Sbjct: 20 VLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQXKQGLED 79
Query: 158 HIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGT 217
+++LA E +D E E++ L + K + E SGE D CY+++QAG+GGT
Sbjct: 80 VSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRXFSGEYDSADCYLDIQAGSGGT 139
Query: 218 ESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVH 277
E+ DWAS + + Y WA+ RG++ +++E GE+AGIK TIK+ G+YA+G+ + E GVH
Sbjct: 140 EAQDWASXLERXYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVH 199
Query: 278 RLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTD 337
RLVR SPFDSG RRHTSF++ V P D ++IN +DLRI+ +R+ GAGGQH N T+
Sbjct: 200 RLVRKSPFDSGGRRHTSFSSAFVYPEV-DDDIDIEINPADLRIDVYRASGAGGQHVNRTE 258
Query: 338 SAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDIS 397
SAVRI HIPTGI CQN+RSQH+NK A ++++ ++E ++ + +DI
Sbjct: 259 SAVRITHIPTGIVTQCQNDRSQHKNKDQAXKQXKAKLYEVEXQKKNAEKQAXEDNKSDIG 318
Query: 398 WGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
WG+QIR+YVL R +KDLRT E + +VL+G LD FI + L A L
Sbjct: 319 WGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL 365
>gi|433461521|ref|ZP_20419130.1| peptide chain release factor RF2 [Halobacillus sp. BAB-2008]
gi|432190021|gb|ELK47072.1| peptide chain release factor RF2 [Halobacillus sp. BAB-2008]
Length = 328
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 153/330 (46%), Positives = 216/330 (65%), Gaps = 3/330 (0%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDM-IKLAREENDTELELES 177
+ +P WDD A ++ E L G + ++A E E E++++ +L +EE D EL +
Sbjct: 1 MTEPGFWDDQNTAQKVIDEVNGLKGLVHTLEAHE-ESHENLEVSYELVKEEADEELLEDL 59
Query: 178 LEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRR 237
++ + + + E EL+ LLS D + +E+ GAGGTES DWAS++L+MY WA+++
Sbjct: 60 IQEVQQLSKDLNEYELNILLSEPYDKNNAILELHPGAGGTESQDWASLLLRMYTRWAEKK 119
Query: 238 GYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAA 297
G+ V+ MD +PGE AG+K T+ + G A+GY KAE GVHRLVRISPFDS RRHTSF +
Sbjct: 120 GFSVSTMDYLPGEEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 179
Query: 298 VAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNER 357
V+P D + + DL+I+ +RS GAGGQH NTTDSAVRI H+PT TCQ+ER
Sbjct: 180 CEVMPEFNDE-VEIDVKTEDLKIDTYRSSGAGGQHVNTTDSAVRITHLPTNTVVTCQSER 238
Query: 358 SQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLR 417
SQ +N+ AM +L++++ QLEI RQ Q + +I WG+QIR+YV HPY MVKD R
Sbjct: 239 SQIKNREQAMKMLKAKLYQLEIERQQQELDDIRGEQKEIGWGSQIRSYVFHPYSMVKDHR 298
Query: 418 TNYEVSDPDSVLEGDLDGFILSYLSASLDK 447
TN E + +V++GDLD FI +YL + +DK
Sbjct: 299 TNIENGNTQAVMDGDLDKFINAYLRSQMDK 328
>gi|410659494|ref|YP_006911865.1| Peptide chain release factor 2; programmed frameshift-containing
[Dehalobacter sp. DCA]
gi|410662472|ref|YP_006914843.1| Peptide chain release factor 2; programmed frameshift-containing
[Dehalobacter sp. CF]
gi|409021849|gb|AFV03880.1| Peptide chain release factor 2; programmed frameshift-containing
[Dehalobacter sp. DCA]
gi|409024828|gb|AFV06858.1| Peptide chain release factor 2; programmed frameshift-containing
[Dehalobacter sp. CF]
Length = 314
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 145/304 (47%), Positives = 206/304 (67%), Gaps = 5/304 (1%)
Query: 142 MGKMKEVKAFEQELLEHIDMI----KLAREENDTELELESLEALLTMRRKSKEKELDALL 197
+ + K+ Q+L + I+ I +LA EE+D LE E ++ ++ + + EL+ LL
Sbjct: 4 LTREKDKVTVHQQLQDQIEDIAALWELAVEEDDISLESEIENTIVKLKNQFADLELEILL 63
Query: 198 SGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRA 257
SG D + I + +GAGGTES DW M+ +MY W +RRG++V +D +PGE AGIK
Sbjct: 64 SGPYDSNNAIITLHSGAGGTESQDWVQMLYRMYVRWGERRGFKVETLDLLPGEEAGIKSV 123
Query: 258 TIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESD 317
T + GE A+GYAK E GVHRLVRISPFD+ RRHTSFA+V VIP D + + I+ D
Sbjct: 124 TFSLAGENAYGYAKCEKGVHRLVRISPFDASGRRHTSFASVDVIPEVTDDA-EITIDAED 182
Query: 318 LRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQL 377
L+++ +RSGGAGGQH N TDSAVRI H+PTGI CQ+ERSQ QN+A M VLQ+++ +L
Sbjct: 183 LKVDTYRSGGAGGQHVNKTDSAVRITHLPTGIIVQCQSERSQIQNRAYCMRVLQAKLLEL 242
Query: 378 EIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
+ +Q + +E DI+WG+QIR+YV HPY MVKD RT+YE + ++V++G++D ++
Sbjct: 243 KRKQQEEEISEVRGEQNDIAWGSQIRSYVFHPYSMVKDHRTSYETGNVNAVMDGEIDPYV 302
Query: 438 LSYL 441
+YL
Sbjct: 303 TAYL 306
>gi|346315468|ref|ZP_08856981.1| peptide chain release factor 2 [Erysipelotrichaceae bacterium
2_2_44A]
gi|345904444|gb|EGX74191.1| peptide chain release factor 2 [Erysipelotrichaceae bacterium
2_2_44A]
Length = 327
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 150/324 (46%), Positives = 207/324 (63%), Gaps = 3/324 (0%)
Query: 123 NLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEA-L 181
+ W+DP HA + R+ + ++ + L+ + L +E+ D E+ E EA
Sbjct: 6 DFWNDPQHAQTLIRQLNGIKDIVESYEKLNSALVGLEETHDLLKEDYDDEI-FELFEAEY 64
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
L M + + E+ LLS E D S +E+ GAGGTES DWA M+ +MY WA+++G++V
Sbjct: 65 LEMEKNFDDFEIKILLSHEYDHSSAILELHPGAGGTESCDWADMLYRMYSRWAEKKGFKV 124
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
+++D +PG+ AGIK T V+G+ A+GY KAE GVHRLVRISPFDSG RRHTSFA++ V+
Sbjct: 125 SVLDYLPGDEAGIKSVTFLVEGDMAYGYLKAEKGVHRLVRISPFDSGGRRHTSFASLDVM 184
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P ++ ++I DL +E R+ GAGGQH N TDSAVR++H PTG+ ATCQN RSQH+
Sbjct: 185 PQF-NNEIEIEIKPEDLIVETKRASGAGGQHINKTDSAVRMVHKPTGLVATCQNGRSQHE 243
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
N+ A+ VL+SR+ Q I Q AE WG+QIR+YV HPY MVKD RT+ E
Sbjct: 244 NREEALRVLKSRLYQKMIEEQEARLAEIKGEQKANEWGSQIRSYVFHPYSMVKDHRTSCE 303
Query: 422 VSDPDSVLEGDLDGFILSYLSASL 445
SD V++GDLD FI +YL +
Sbjct: 304 TSDVQGVMDGDLDAFIFAYLKTQI 327
>gi|212640382|ref|YP_002316902.1| protein chain release factor B [Anoxybacillus flavithermus WK1]
gi|212561862|gb|ACJ34917.1| Protein chain release factor B [Anoxybacillus flavithermus WK1]
Length = 329
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 146/325 (44%), Positives = 212/325 (65%), Gaps = 3/325 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMI-KLAREENDTELELESLEA 180
P+ WDD A + E +L + E ++ E E E++++ +L +EE D EL+ E +
Sbjct: 4 PDFWDDQKAAQSVISEANALKDLVGEFRSLE-ERFENLEVTYELVKEEPDEELQKELVAE 62
Query: 181 LLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYR 240
+ + E EL LL+ D + +E+ GAGGTES DWASM+L+MY WA+++GY+
Sbjct: 63 AKKLSKDFSEFELQLLLNEPYDKNNAILELHPGAGGTESQDWASMLLRMYTRWAEKKGYK 122
Query: 241 VTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAV 300
V +D +PGE AG+K T+ + G A+GY KAE GVHRLVRISPFD+ RRHTSF + V
Sbjct: 123 VETLDYLPGEEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSCEV 182
Query: 301 IPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQH 360
+P D + + + +++++ +RS GAGGQH NTTDSAVRI HIPTGI TCQ+ERSQ
Sbjct: 183 VPEF-DDNIEIDVRPDEIKVDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVTCQSERSQI 241
Query: 361 QNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNY 420
+N+ AM +L++++ Q ++ Q AE +I WG+QIR+YV HPY +VKD RTN
Sbjct: 242 KNREKAMNMLKAKLYQKKLEEQQAELAEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNT 301
Query: 421 EVSDPDSVLEGDLDGFILSYLSASL 445
EV + +V++G++D FI +YL + L
Sbjct: 302 EVGNVQAVMDGEIDVFIDAYLRSKL 326
>gi|395765834|ref|ZP_10446425.1| peptide chain release factor 2 [Bartonella sp. DB5-6]
gi|395410839|gb|EJF77386.1| peptide chain release factor 2 [Bartonella sp. DB5-6]
Length = 322
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 149/310 (48%), Positives = 212/310 (68%), Gaps = 1/310 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + +++F + L E I++I + EE+D E+ ++ ++ ++ + ++++D
Sbjct: 3 RERQYLGDSINSIRSFTKTLEECIELIAMGEEESDIEIISDAENSIRNLKSEIDKRQIDV 62
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+EV AGAGGTES DWASM+L+MY WA++ RV +++ GE AGIK
Sbjct: 63 LLSGEADSNDTYLEVHAGAGGTESQDWASMLLRMYTRWAEQHKMRVEILEIHDGEEAGIK 122
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
AT+ V G A+G K E GVHRLVRISPFDS +RHTSFA++ V P D + V ++E
Sbjct: 123 SATLLVKGHNAYGMLKTESGVHRLVRISPFDSNAKRHTSFASIWVYP-VIDDNIEVDVSE 181
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
+D+RI+ +R+ GAGGQH NTTDSAVRI HI TGI CQ ERSQH+N+A+A +L++R+
Sbjct: 182 ADVRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNRATAWSMLRARLY 241
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ ++ + S T+I WG+QIR+YVL PY++VKDLRT E +DP SVL G+LD
Sbjct: 242 EEELKKREEETNAVEASKTEIGWGHQIRSYVLQPYQLVKDLRTGVENTDPQSVLNGNLDV 301
Query: 436 FILSYLSASL 445
FI + L+ L
Sbjct: 302 FIEATLAQRL 311
>gi|240143320|ref|ZP_04741921.1| peptide chain release factor 2 [Roseburia intestinalis L1-82]
gi|257204691|gb|EEV02976.1| peptide chain release factor 2 [Roseburia intestinalis L1-82]
gi|291536819|emb|CBL09931.1| bacterial peptide chain release factor 2 (bRF-2) [Roseburia
intestinalis M50/1]
gi|291539122|emb|CBL12233.1| bacterial peptide chain release factor 2 (bRF-2) [Roseburia
intestinalis XB6B4]
Length = 338
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 147/323 (45%), Positives = 204/323 (63%), Gaps = 1/323 (0%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
+ PN WDDPV + + +E S+ + + + E + +I++ EEND L E
Sbjct: 1 MEAPNFWDDPVVSQKKMKELKSMKDDVATYASLKTEFEDIETLIEMGYEENDASLIPEIQ 60
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
E L + + + LLSGE D + + AGAGGTES DWA+M+ +MY WA +G
Sbjct: 61 EMLDEFTKTYEGIRIKTLLSGEYDSDGAIVSLHAGAGGTESCDWAAMLYRMYTRWASDKG 120
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
+ V ++D + GE AGIK T +++GE A+GY K+E GVHRLVRISPF++ +R TSF +
Sbjct: 121 FSVEVLDSLDGEEAGIKSITFQINGENAYGYMKSEKGVHRLVRISPFNAAGKRQTSFVSC 180
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
V+P+ + V+INE DLRI+ +RS GAGGQH N T SA+RI HIPTGI CQNERS
Sbjct: 181 DVMPDI-EEDLDVEINEDDLRIDTYRSSGAGGQHINKTSSAIRITHIPTGIVVQCQNERS 239
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
Q QNK AM +L++++ L+ A+ A+ +T+I WGNQIR+YV+ PY MVKD RT
Sbjct: 240 QFQNKDKAMQMLKAKLYLLKQQENAEKAADIRGEVTEIGWGNQIRSYVMQPYTMVKDHRT 299
Query: 419 NYEVSDPDSVLEGDLDGFILSYL 441
E + DSV++G +D FI YL
Sbjct: 300 GVETGNVDSVMDGKIDIFINGYL 322
>gi|373453408|ref|ZP_09545302.1| peptide chain release factor 2 [Eubacterium sp. 3_1_31]
gi|371963780|gb|EHO81326.1| peptide chain release factor 2 [Eubacterium sp. 3_1_31]
Length = 346
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 149/331 (45%), Positives = 209/331 (63%), Gaps = 1/331 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
++ L+A+ + + W+DP A + R+ ++ + A ++ L + +L +E+ D
Sbjct: 12 KIQELTAKTLEESFWNDPQKAQVVIRQLNAIKDVVDSYDALQKALSSLDETQELLKEDFD 71
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
E+ M + + E+ LLS E D S +E+ GAGGTES DWA M+ +MY
Sbjct: 72 EEIFELFELEYQEMEKNFADFEIKVLLSHEYDHSSAILELHPGAGGTESCDWADMLYRMY 131
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA++ ++V+++D PG+ AGIK T V+G+ A+GY KAE GVHRLVRISPFD+G R
Sbjct: 132 SRWAEKHEFKVSVLDYQPGDEAGIKSITFLVEGDMAYGYLKAEKGVHRLVRISPFDAGGR 191
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSFA++ V+P D ++I DL +E R+ GAGGQH N TDSAVR++H PTG+
Sbjct: 192 RHTSFASLDVMPQFNDE-IEIEIKPEDLIVETKRASGAGGQHINKTDSAVRMVHKPTGLV 250
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
ATCQN RSQH+N+ A+ VL+SR+ Q I Q AE + WG+QIR+YV HPY
Sbjct: 251 ATCQNGRSQHENREEALRVLKSRLYQKMIEEQEAKLAEIKGEVKANEWGSQIRSYVFHPY 310
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
MVKD RTN+E SD V++GDLDGFI +YL
Sbjct: 311 SMVKDHRTNHETSDVQGVMDGDLDGFIFAYL 341
>gi|325849490|ref|ZP_08170771.1| peptide chain release factor 2 [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325480110|gb|EGC83185.1| peptide chain release factor 2 [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 369
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 153/355 (43%), Positives = 220/355 (61%), Gaps = 8/355 (2%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
+ +++++I L NL V + + E K N WDD A I L K + K F
Sbjct: 14 LDKNLKMIGAHLDPDNLFVEIKNIEKETLKENFWDDSQKAQEIM---ADLSDKKDDYKTF 70
Query: 152 ---EQELLEHIDMIKLAREENDTELELESLEALLTMRRKS-KEKELDALLSGELDPCSCY 207
++EL + D+I + E N+ L +E L M +K ++ L GE D + Y
Sbjct: 71 INLKEELKDQSDLIDIIEETNEELDSLVDVENSLNMLKKEISSFKIKTELDGEYDRNNAY 130
Query: 208 IEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAF 267
+ + AGAGG E+ DWA M+++MY + +RR ++ + D E GIK ATI + G +A+
Sbjct: 131 MVIHAGAGGLEATDWAEMLMRMYTRFFERRNFKFDITDLNNEEAGGIKSATIHIKGSFAY 190
Query: 268 GYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGG 327
GY K E GVHRLVRISPFDS KRRHTSFA++ + P D + V+I+ DLRI+ +R+ G
Sbjct: 191 GYLKGERGVHRLVRISPFDSSKRRHTSFASIDIFPELNDDMS-VEIDPKDLRIDTYRASG 249
Query: 328 AGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNA 387
AGGQH N TDSAVRI HIPTG+ A+ Q ERSQ QNK +AM +L +++ Q++ +
Sbjct: 250 AGGQHVNKTDSAVRITHIPTGVIASSQAERSQTQNKETAMKLLLAKLTQIKEEEHREKIE 309
Query: 388 EHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
+ + T I+WG+QIR+YV HPY +VKD RTN+EV + +SV++GD+DGFI +YL+
Sbjct: 310 DIQGNYTQIAWGSQIRSYVFHPYTLVKDHRTNFEVGNVESVMDGDIDGFIDAYLA 364
>gi|17545749|ref|NP_519151.1| peptide chain release factor 2 [Ralstonia solanacearum GMI1000]
gi|17428043|emb|CAD14732.1| probable peptide chain release factor 2 (rf-2) protein [Ralstonia
solanacearum GMI1000]
Length = 300
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 144/293 (49%), Positives = 210/293 (71%), Gaps = 6/293 (2%)
Query: 151 FEQELLEHIDMIKLAREENDTELELESLEA-LLTMRRKSKEKELDALLSGELDPCSCYIE 209
+++L ++ +LAREE D + +E++EA MR ++ E + SG +D +C+I+
Sbjct: 8 LDEDLTGGAELFELAREEGDDDT-IEAVEADTAGMRAIVEDMEFRRMFSGPMDAANCFID 66
Query: 210 VQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGY 269
+QAGAGGTE+ DWASM+L+ Y + +R+G++ +++E G++AGIK A++KV+GEYAFG+
Sbjct: 67 IQAGAGGTEACDWASMLLRQYLKYCERKGFKTEVLEESEGDVAGIKSASLKVEGEYAFGF 126
Query: 270 AKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAG 329
+ E GVHRLVR SPFDS RHTSF+++ V P D S +++N +DLR++ +R+ GAG
Sbjct: 127 LRTETGVHRLVRKSPFDSAGGRHTSFSSIFVYPEV-DDSIEIEVNPADLRVDTYRASGAG 185
Query: 330 GQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEH 389
GQH N TDSAVRI HIPTGI CQN+RSQH+N+A AM +L+SR+ + E+ R+ Q A+
Sbjct: 186 GQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHEL-RKRQAEADK 244
Query: 390 TQ-SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
+ S TD+ WG+QIR+YVL R +KDLRTN E+S+ VL+GDLD FI + L
Sbjct: 245 LEASKTDVGWGHQIRSYVLDQSR-IKDLRTNVEISNTQKVLDGDLDAFIEASL 296
>gi|452993792|emb|CCQ94608.1| Peptide chain release factor 2 [Clostridium ultunense Esp]
Length = 346
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 147/338 (43%), Positives = 216/338 (63%), Gaps = 9/338 (2%)
Query: 108 LNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHID----MIK 163
LN + L + + W D A +I ++ +L G +KE ++LL I+ +I+
Sbjct: 9 LNKEIEKLEKKSFAEDFWQDSDKAQKIMQKISNLKGAVKEY----EDLLNSIEDLEVLIE 64
Query: 164 LAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWA 223
L+ EE D + E E + ++++ +L LL+GE D + + + +GAGG E+ DWA
Sbjct: 65 LSLEEEDYHVYKEIKENFEKVSYEAEKFKLSTLLNGEYDKNNAILSIHSGAGGLEAQDWA 124
Query: 224 SMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRIS 283
M+ +MYK WA+++G+RV ++D + GIK T+ + G AFGY K+E GVHRLVRIS
Sbjct: 125 EMLFRMYKRWAEQKGFRVEILDLLSDTEGGIKSVTMLIKGFNAFGYLKSEKGVHRLVRIS 184
Query: 284 PFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRII 343
PFDS RRHTSFA++ + P D ++INESD++I+ +R+ GAGGQH NTTDSAVR+
Sbjct: 185 PFDSSNRRHTSFASIDIYPEL-DDDMDIEINESDIKIDTYRASGAGGQHVNTTDSAVRVT 243
Query: 344 HIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIR 403
HIPTGI CQNERSQH N+ +AM +L++++ QL+ Q + + T I+WG+QIR
Sbjct: 244 HIPTGIIVQCQNERSQHSNRLTAMKMLKAKLIQLKEEEQKEKIEDLQGKYTQIAWGSQIR 303
Query: 404 TYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
+Y+ HPY +VKD RT E+ D D V++GD+D FI YL
Sbjct: 304 SYIFHPYSLVKDHRTEVEIGDIDKVMDGDIDLFINEYL 341
>gi|297243831|ref|ZP_06927761.1| protein chain release factor B [Gardnerella vaginalis AMD]
gi|415708622|ref|ZP_11462636.1| peptide chain release factor 2 [Gardnerella vaginalis 6420LIT]
gi|415710294|ref|ZP_11463683.1| peptide chain release factor 2 [Gardnerella vaginalis 6420B]
gi|296888252|gb|EFH26994.1| protein chain release factor B [Gardnerella vaginalis AMD]
gi|388054521|gb|EIK77459.1| peptide chain release factor 2 [Gardnerella vaginalis 6420LIT]
gi|388055534|gb|EIK78435.1| peptide chain release factor 2 [Gardnerella vaginalis 6420B]
Length = 378
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 149/340 (43%), Positives = 217/340 (63%), Gaps = 2/340 (0%)
Query: 98 VIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLE 157
+I K L +L + L + +P LWDD HA +++ + + ++K ++A EQ + +
Sbjct: 19 LISKALDVDSLKATIADLEKQAAEPGLWDDSEHAQQVTSKLSAAQSQLKRLQAVEQRIED 78
Query: 158 HIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGT 217
+I+L EE D + E+ E L + + + E+ LL GE D S + +++GAGG
Sbjct: 79 TKTLIELGEEEGDADSMNEAQEELGNIAHELDDMEVQTLLDGEYDARSAVVTIRSGAGGV 138
Query: 218 ESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVH 277
++ D+A M+L+MY WA+R GY+ +MD E AGIK AT +VD YA+G E G H
Sbjct: 139 DAADFAQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTH 198
Query: 278 RLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTD 337
R+VRISPFD+ RR T F+AV VIP +++ H+ I +SD+R++ F++ G GGQ NTT
Sbjct: 199 RMVRISPFDNQGRRQTGFSAVEVIPLV-EATDHIDIPDSDIRVDTFQASGPGGQGVNTTY 257
Query: 338 SAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDIS 397
SAVRI H+PTG+ + Q+ERSQ QN+A+AM VLQSR+ L+ A +A E + S
Sbjct: 258 SAVRITHLPTGLVVSMQDERSQIQNRAAAMAVLQSRLLVLKHAEEAAKKKELAGDIK-AS 316
Query: 398 WGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
WG+Q+R+YVLHPY+MVKDLRT YE S +V +GD+DGFI
Sbjct: 317 WGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFI 356
>gi|357011498|ref|ZP_09076497.1| PrfB [Paenibacillus elgii B69]
Length = 336
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 143/329 (43%), Positives = 212/329 (64%), Gaps = 1/329 (0%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
++ P+ WDD A ++ E + + E +A E + M +L +EE D + E
Sbjct: 1 MSAPDFWDDNERAQKLIGEANGVKSVVDEFQALASEYEDLEVMAQLMQEEQDDSMVAEIE 60
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
+ ++ +K + EL LLS D + +E+ GAGGTES DWA M+L+MY+ WA++R
Sbjct: 61 AGIASLIKKLENFELQLLLSQPYDRLNAILELHPGAGGTESQDWAEMLLRMYRRWAEKRD 120
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
++V ++D +PG+ AG+K T+ + G A+GY KAE GVHRLVRISPFD+ RRHTSF +
Sbjct: 121 FKVEVLDYLPGDEAGVKSVTLLIKGYNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSC 180
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
V+P D ++I DL+++ +R+ GAGGQH NTTDSAVRI H+PTG+ +CQ ERS
Sbjct: 181 DVMPEI-DDDVEIEIRTEDLKVDTYRASGAGGQHINTTDSAVRITHLPTGVVVSCQTERS 239
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
Q +N+ AM +L+S++ + +I Q + AE ++DI+WG+QIR+YV HPY MVKD RT
Sbjct: 240 QIKNRERAMKMLRSKLYEKKIEEQQKQLAEIRGEVSDIAWGSQIRSYVFHPYSMVKDHRT 299
Query: 419 NYEVSDPDSVLEGDLDGFILSYLSASLDK 447
E + +V++GDLD FI +YL ++K
Sbjct: 300 QEETGNVGAVMDGDLDAFIDAYLRQQINK 328
>gi|118580454|ref|YP_901704.1| peptide chain release factor 2 [Pelobacter propionicus DSM 2379]
gi|118503164|gb|ABK99646.1| bacterial peptide chain release factor 2 (bRF-2) [Pelobacter
propionicus DSM 2379]
Length = 361
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 134/250 (53%), Positives = 180/250 (72%)
Query: 192 ELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEI 251
E +LSGE D SC+I + GAGGTES DWA M+L+MY + +++G++ ++ D G+
Sbjct: 101 EFQRMLSGEHDRNSCFISINPGAGGTESQDWAEMLLRMYLRYCEKKGWKTSITDYQSGDE 160
Query: 252 AGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHV 311
AGIK AT V GEYA+GY KAE G+HRLVRISPFDS RRHTSFA+V P + +
Sbjct: 161 AGIKSATFSVSGEYAYGYLKAEAGIHRLVRISPFDSNARRHTSFASVYAFPEIEEEDIDI 220
Query: 312 QINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQ 371
+I +SDLR++ FRSGGAGGQH NTTDSAVRI H+PT I CQ+ERSQ N+A+AM VL+
Sbjct: 221 KIADSDLRVDTFRSGGAGGQHVNTTDSAVRITHLPTNIVVACQSERSQILNRATAMKVLR 280
Query: 372 SRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEG 431
+++ + E+ + +E +I WG+QIR+YVLHPY+MVKDLRT E +PD+VL+G
Sbjct: 281 AKLYEKEVQERTARASEIASEKKEIGWGSQIRSYVLHPYKMVKDLRTGVESGNPDAVLDG 340
Query: 432 DLDGFILSYL 441
L+ F+++YL
Sbjct: 341 ALEEFVVAYL 350
>gi|385330508|ref|YP_005884459.1| peptide chain release factor 2 [Marinobacter adhaerens HP15]
gi|311693658|gb|ADP96531.1| peptide chain release factor 2 [Marinobacter adhaerens HP15]
Length = 351
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 156/339 (46%), Positives = 220/339 (64%), Gaps = 10/339 (2%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL + EL +P++WDDP A + +E L +K + L + ++ +A EE D
Sbjct: 19 RLIEVERELEQPSVWDDPERAQALGKERADLELIVKTIDNLTSGLEDAEGLLDIAAEEED 78
Query: 171 --TELELES-LEALLTMRRKSKEK-ELDALLSGELDPCSCYIEVQAGAGGTESMDWASMV 226
T E+ES LE L K EK E + SGE+D + Y+++QAG+GGTE+ DWA+M+
Sbjct: 79 EGTVAEIESDLEGL----DKELEKLEFRRMFSGEMDANNAYLDIQAGSGGTEAQDWANML 134
Query: 227 LQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFD 286
L+MY WA+RRG++ +++ M GE+AGIK ATI + G+YA+G+ + E GVHRLVR SPFD
Sbjct: 135 LRMYLRWAERRGFKAEIVELMEGEVAGIKSATIHIQGDYAYGWLRTETGVHRLVRKSPFD 194
Query: 287 SGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIP 346
SG RRHTSF++V V P D S ++IN +DLR++ +R+ GAGGQH N T+SAVR+ H P
Sbjct: 195 SGNRRHTSFSSVFVSPEV-DDSFEIEINPADLRVDVYRASGAGGQHVNRTESAVRLTHNP 253
Query: 347 TGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYV 406
TGI CQ RSQHQNK AM L++++ + E+ + + + DI WG+QIR+YV
Sbjct: 254 TGIVVACQAGRSQHQNKDQAMKQLKAKLFEREMQERNAEKQKAEDAKADIGWGSQIRSYV 313
Query: 407 LHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
L R +KDLRT E S+ SVL+GD+D FI + L +L
Sbjct: 314 LDDSR-IKDLRTKVETSNTQSVLDGDIDKFIEASLKMAL 351
>gi|395782041|ref|ZP_10462450.1| peptide chain release factor 2 [Bartonella rattimassiliensis 15908]
gi|395419892|gb|EJF86178.1| peptide chain release factor 2 [Bartonella rattimassiliensis 15908]
Length = 321
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 149/307 (48%), Positives = 210/307 (68%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + + +F + L E I+ I + EE+D E+ ++ ++ ++ + +K++D
Sbjct: 2 RERQRLDDSINGLLSFTKTLEECIEFITMGEEESDAEIIADAENSIRNLKSEIDKKQIDV 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE DP Y+E+ AGAGGTES DWASM+L+MY WA++ +V +++ GE AGIK
Sbjct: 62 LLSGEADPNDTYLEIHAGAGGTESQDWASMLLRMYMRWAEQHEMKVEVLEIHDGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI V G A+G K E GVHRLVRISPFDS +RHTSFA++ V P D + V ++E
Sbjct: 122 SATILVKGHSAYGLLKTESGVHRLVRISPFDSNAKRHTSFASIWVYP-VIDDNIEVDVSE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
+D+RI+ +R+ GAGGQH NTTDSAVRI HI TGI CQ ERSQH+N+A+A +L++R+
Sbjct: 181 ADVRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNRATAWSMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ ++ + S T+I WG+QIR+YVL PY++VKDLRT E +DP SVL G+LD
Sbjct: 241 EEELKKREEEANTAESSKTEIGWGHQIRSYVLQPYQLVKDLRTGVENTDPQSVLNGNLDA 300
Query: 436 FILSYLS 442
FI + L+
Sbjct: 301 FIEAALA 307
>gi|333896506|ref|YP_004470380.1| hypothetical protein Thexy_0660 [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333111771|gb|AEF16708.1| hypothetical protein Thexy_0660 [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 365
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 147/363 (40%), Positives = 221/363 (60%), Gaps = 9/363 (2%)
Query: 83 GDWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLM 142
D+K+ + +I+ + L + L + + ++++P+ W+D +S++ L
Sbjct: 3 ADYKTEVLNMIDTIKEMGASLDIEGLKREVAEIDKKMSEPDFWNDLEKFQELSKKQKDLK 62
Query: 143 GKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELD 202
+ E +A E++ + +I+L EE D L E E + +K + ++ LLSG D
Sbjct: 63 EIISEYEALEKQWEDLHTLIELGLEEGDESLSQEVHEEYKALSKKINDMKIKTLLSGPYD 122
Query: 203 PCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVD 262
+ + + AGAGGTE+ DW M+L+MY WA + Y V +D +PG+ AG+K TI V
Sbjct: 123 KNNAILSIHAGAGGTEAQDWTEMLLRMYMRWASSKNYDVETVDYLPGDDAGVKSVTIMVK 182
Query: 263 GEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIER 322
G +A+GY K+E GVHRLVRISPFD+ RRHTSFA V V+P D V I DL+I+
Sbjct: 183 GPFAYGYLKSEAGVHRLVRISPFDAAGRRHTSFALVEVLPEI-DDDIKVDIRPEDLKIDT 241
Query: 323 FRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ 382
+RS GAGGQH N T+SA+RI HIPTGI CQ ERSQ QN+ +AM +L++++ + I Q
Sbjct: 242 YRSSGAGGQHVNKTESAIRITHIPTGIIVQCQTERSQMQNRETAMKMLKAKLMDMMIKEQ 301
Query: 383 AQ----MNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFIL 438
+ + EH ++ WGNQIR+YV PY +VKD RTN+EV + ++V++G++D FI
Sbjct: 302 KEKIEDLKGEHKEA----GWGNQIRSYVFQPYTLVKDHRTNFEVGNVNAVMDGEIDDFIN 357
Query: 439 SYL 441
+YL
Sbjct: 358 AYL 360
>gi|320106646|ref|YP_004182236.1| hypothetical protein AciPR4_1419 [Terriglobus saanensis SP1PR4]
gi|319925167|gb|ADV82242.1| hypothetical protein AciPR4_1419 [Terriglobus saanensis SP1PR4]
Length = 375
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 153/363 (42%), Positives = 221/363 (60%), Gaps = 3/363 (0%)
Query: 84 DWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
D + + + ++ +++ L L L + + + P +W DP + + RE L G
Sbjct: 4 DLEYAYSPVRARVRDLREYLDSTRLKKDLARIEEQSSDPAIWADPARSQPLMRERKRLEG 63
Query: 144 KMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDP 203
+ + E+ + +L RE + E EL + ++ + ++ E +LS E DP
Sbjct: 64 LLSDDADLERRSGDIDAYFELGREGENVEPEL--AREIASIEQAIEKLESRTMLSEETDP 121
Query: 204 CSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDG 263
+ + V GAGGTES DWA M+++MY W +R+G++ + + G+ AGIK AT + G
Sbjct: 122 LNAIVTVHPGAGGTESQDWAEMLMRMYLRWGERQGFKTEINEIQDGDEAGIKSATFTITG 181
Query: 264 EYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERF 323
++A+G E GVHRLVRISPFDS KRRHTSF++V V P DS + I DLRI+ +
Sbjct: 182 DFAYGLLSGETGVHRLVRISPFDSAKRRHTSFSSVFVSPEIDDSIV-IDIKPDDLRIDTY 240
Query: 324 RSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQA 383
RSGG GGQH NTTDSAVRI H+PTGI A CQNERSQH+NK AM +L+SR+ + E+ ++
Sbjct: 241 RSGGKGGQHVNTTDSAVRITHLPTGIVAGCQNERSQHKNKDKAMKMLRSRLYEFELDKKK 300
Query: 384 QMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSA 443
++ + S +I++G+QIR+YVL PYRM KDLRT EV D D VL+GDL+ FI +L
Sbjct: 301 AISRKLEDSKLEINFGSQIRSYVLQPYRMAKDLRTRVEVGDVDRVLDGDLEPFIRGFLRM 360
Query: 444 SLD 446
D
Sbjct: 361 RRD 363
>gi|417956902|ref|ZP_12599836.1| peptide chain release factor 2 [Neisseria weaveri ATCC 51223]
gi|343969648|gb|EGV37858.1| peptide chain release factor 2 [Neisseria weaveri ATCC 51223]
Length = 367
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 148/344 (43%), Positives = 224/344 (65%), Gaps = 4/344 (1%)
Query: 99 IKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEH 158
I+ L + RL + P+LW+DP A I +E L G + + + ++
Sbjct: 23 IRVYLDYDGKKDRLEEVVGLSEDPDLWNDPKKAQEIGKERKVLEGIVLTLDNIAAGIDDN 82
Query: 159 IDMIKLAREENDTELELESLEA-LLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGT 217
+++++ EEND E S++A + + ++ E E + + D +C+I++ AGAGGT
Sbjct: 83 RELLEMVVEENDEE-GFASVQADIANLEKQMGELEFKRMFNQPADVNNCFIDITAGAGGT 141
Query: 218 ESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVH 277
E+ DWA M+ +MY +A+R+G++V +++E G+IAGI RATIK++GEYA+G + E G+H
Sbjct: 142 EAEDWAGMLYRMYLRYAERKGFKVDVLEEDEGDIAGINRATIKLEGEYAYGLLRTETGIH 201
Query: 278 RLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTD 337
RLVR SPFDS +RHTSF +V V P D S V+IN +DLRI+ +R+ GAGGQH N TD
Sbjct: 202 RLVRYSPFDSNNKRHTSFCSVFVYPEV-DDSFEVEINPADLRIDTYRASGAGGQHINKTD 260
Query: 338 SAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDIS 397
SAVRI H PTGI CQN+RSQH+N+ AM +L++++ +LE+ ++ + S +D+
Sbjct: 261 SAVRITHNPTGIVVQCQNDRSQHRNRDEAMNMLKAKLFELEMRKRNEEKQSLEDSKSDVG 320
Query: 398 WGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
WG+QIR+YV R +KDLRT+YEV + +V++GDLDGFI + L
Sbjct: 321 WGHQIRSYVFDQSR-IKDLRTSYEVGNIKAVMDGDLDGFIEASL 363
>gi|297618035|ref|YP_003703194.1| hypothetical protein Slip_1875 [Syntrophothermus lipocalidus DSM
12680]
gi|297145872|gb|ADI02629.1| hypothetical protein Slip_1875 [Syntrophothermus lipocalidus DSM
12680]
Length = 371
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 152/353 (43%), Positives = 225/353 (63%), Gaps = 1/353 (0%)
Query: 89 AAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEV 148
A I + ++ I L + L R+ L + +P WDD A ++ +E L ++
Sbjct: 10 ACEIKKRLEEIGGSLDVEGLKHRIKKLEDKTCQPGFWDDNQEAQKVVKEMSGLKERVDSY 69
Query: 149 KAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYI 208
++ +E+ + +++LA E D EL E+ L + R+ +E EL + GE D + +
Sbjct: 70 ESLVREIEDISALLELAEAEEDEELYREAAAELARLNRRFREYELSIMFKGEHDDSNAIV 129
Query: 209 EVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFG 268
+ AGAGGT++ DW M+L+MY WA+ GY V +MD +PGE AGIK T+ + G+YA+G
Sbjct: 130 SLHAGAGGTDAQDWVEMLLRMYTRWAEDNGYEVDIMDYLPGEEAGIKSVTLLIKGKYAYG 189
Query: 269 YAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGA 328
+AE GVHRL+R+SPFD+ RRHTSFA V+V+P D V I+ DLRI+ FR+GGA
Sbjct: 190 KMRAEAGVHRLIRVSPFDASGRRHTSFALVSVLPEIQD-DVEVTISSDDLRIDTFRAGGA 248
Query: 329 GGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAE 388
GGQH N TDSAVRI H+P+GI CQNERSQ+ NK +AM +L++++ +L+ Q + +
Sbjct: 249 GGQHVNKTDSAVRITHLPSGIVVQCQNERSQYANKLAAMKILRAKLYELKQREQEESLQK 308
Query: 389 HTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
+I+WGNQIRTYVL+P+ +VKD RT EV + ++VL+GD++ FI +YL
Sbjct: 309 LKGEYKEIAWGNQIRTYVLNPFSLVKDHRTGLEVGNVNAVLDGDINDFITAYL 361
>gi|417904612|ref|ZP_12548434.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21269]
gi|341846518|gb|EGS87710.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21269]
Length = 331
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 144/330 (43%), Positives = 212/330 (64%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
+ +PN WD+ A I ++ +L + KA + E+ + L +EE D E++ +
Sbjct: 2 MAEPNFWDNQTKAQDIIDKNNALKAIVNGYKALQAEVDDMDATWDLLQEEFDEEMKEDLE 61
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
+ ++ + K E EL LL G D + +E+ GAGGTES DWA+M+ +MY+ + +++G
Sbjct: 62 QEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKG 121
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
++V +D +PG+ AGIK T+ + G A+GY KAE GVHRLVRISPFDS RRHTSFA+
Sbjct: 122 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASC 181
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
VIP+ + ++IN D+ ++ FR+ GAGGQH N T+SA+RI H P+GI QNERS
Sbjct: 182 DVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERS 241
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
Q +N+ +AM +L+S++ QL++ QA+ AE +I WG+QIR+YV HPY MVKD RT
Sbjct: 242 QIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRT 301
Query: 419 NYEVSDPDSVLEGDLDGFILSYLSASLDKD 448
N E D+V++GD+ FI SYL ++ D
Sbjct: 302 NEETGKVDAVMDGDIGPFIESYLRQTMSHD 331
>gi|415728929|ref|ZP_11472267.1| peptide chain release factor 2 [Gardnerella vaginalis 6119V5]
gi|388064929|gb|EIK87444.1| peptide chain release factor 2 [Gardnerella vaginalis 6119V5]
Length = 380
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 148/339 (43%), Positives = 219/339 (64%), Gaps = 2/339 (0%)
Query: 99 IKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEH 158
I K L +L V + L + +P LWDD HA +++ + + ++K ++A +Q + +
Sbjct: 20 IVKALDVDSLKVTIADLEKQAAEPGLWDDSEHAQQVTSKLSAAQSQLKRLQAVDQRIEDT 79
Query: 159 IDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTE 218
+I+L +EE D + E+ + L ++ + + E+ LL GE D S + +++GAGG +
Sbjct: 80 KTLIELGQEEGDADSMSEAQDELGSIAHELDDMEVQTLLDGEYDARSAVVTIRSGAGGVD 139
Query: 219 SMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHR 278
+ D+A M+L+MY WA+R GY+ +MD E AGIK AT +VD YA+G E G HR
Sbjct: 140 AADFAQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTHR 199
Query: 279 LVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDS 338
+VRISPFD+ RR T F+AV VIP +++ H+ I +SD+R++ F++ G GGQ NTT S
Sbjct: 200 MVRISPFDNQGRRQTGFSAVEVIPLV-EATDHIDIPDSDIRVDTFQASGPGGQGVNTTYS 258
Query: 339 AVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISW 398
AVRI H+PTG+ + Q+ERSQ QN+A+AM VLQSR+ L+ A +A E + SW
Sbjct: 259 AVRITHLPTGLVVSMQDERSQIQNRAAAMAVLQSRLLVLKHAEEAAKKKELAGDIK-ASW 317
Query: 399 GNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
G+Q+R+YVLHPY+MVKDLRT YE S +V +GD+DGFI
Sbjct: 318 GDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFI 356
>gi|333924707|ref|YP_004498287.1| peptide chain release factor 2 [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|333750268|gb|AEF95375.1| Peptide chain release factor 2 [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 375
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 147/350 (42%), Positives = 220/350 (62%), Gaps = 1/350 (0%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
+ + I+ ++ L N + L E+ + WD+ H+ +++++ L K++ +
Sbjct: 16 LGKRIEDLRVSLDIANQQQEIEKLEHEMTQEGFWDNTEHSQQVTQKLALLKDKVEAFNSL 75
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
E + M++L EE D L+ E L ++ ++ + EL+ +LSG D + +
Sbjct: 76 ESAYQDLEVMLELCNEEEDPLLDDELKSDLASLTKRVADMELEVMLSGPYDRNDAILSLH 135
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AGAGGTES DW M+L+M+ + + Y+V ++D +PG+ AG+K ATI+V G A+GY K
Sbjct: 136 AGAGGTESQDWVQMLLRMFTRYCENHNYKVEVLDLLPGDEAGVKSATIQVSGPNAYGYLK 195
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
+E GVHRLVRISPFD+ RRHTSFA+V V+P D V I DL+I+ +RSGGAGGQ
Sbjct: 196 SEKGVHRLVRISPFDAAGRRHTSFASVDVLPVV-DDEVEVNIRPEDLKIDTYRSGGAGGQ 254
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQ 391
H N TDSAVRI H+PTGI CQNERSQ N+A+AM +L++++ LE+ ++ + A
Sbjct: 255 HVNKTDSAVRITHLPTGIVVACQNERSQTYNRAAAMKLLKAKLIDLELRKKEEELAALRG 314
Query: 392 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
DI+WG+QIR+YV HPY +VKD RT EV + +V++G +D FI +YL
Sbjct: 315 DQKDIAWGSQIRSYVFHPYSLVKDHRTGVEVGNVYAVMDGAIDEFIAAYL 364
>gi|293400349|ref|ZP_06644495.1| peptide chain release factor 2 [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291306749|gb|EFE47992.1| peptide chain release factor 2 [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 346
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 149/331 (45%), Positives = 209/331 (63%), Gaps = 1/331 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
++ L+A+ + + W+DP A + R+ ++ + A ++ L + +L +E+ D
Sbjct: 12 KIQELTAKTLEESFWNDPQKAQVVIRQLNAIKDVVDSYDALQKALNSLDETQELLKEDFD 71
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
E+ M + + E+ LLS E D S +E+ GAGGTES DWA M+ +MY
Sbjct: 72 EEIFELFELEYQEMEKNFADFEIKVLLSHEYDHSSAILELHPGAGGTESCDWADMLYRMY 131
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA++ ++V+++D PG+ AGIK T V+G+ A+GY KAE GVHRLVRISPFD+G R
Sbjct: 132 SRWAEKHEFKVSVLDYQPGDEAGIKSITFLVEGDMAYGYLKAEKGVHRLVRISPFDAGGR 191
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSFA++ V+P D ++I DL +E R+ GAGGQH N TDSAVR++H PTG+
Sbjct: 192 RHTSFASLDVMPQFNDE-IEIEIKPEDLIVETKRASGAGGQHINKTDSAVRMVHKPTGLV 250
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
ATCQN RSQH+N+ A+ VL+SR+ Q I Q AE + WG+QIR+YV HPY
Sbjct: 251 ATCQNGRSQHENREEALRVLKSRLYQKMIEEQEAKLAEIKGEVKANEWGSQIRSYVFHPY 310
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
MVKD RTN+E SD V++GDLDGFI +YL
Sbjct: 311 SMVKDHRTNHETSDVQGVMDGDLDGFIFAYL 341
>gi|283783522|ref|YP_003374276.1| peptide chain release factor 2 [Gardnerella vaginalis 409-05]
gi|283441040|gb|ADB13506.1| peptide chain release factor 2 [Gardnerella vaginalis 409-05]
Length = 378
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 148/339 (43%), Positives = 217/339 (64%), Gaps = 2/339 (0%)
Query: 99 IKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEH 158
I K L +L + L + +P LWDD HA +++ + + ++K ++A +Q + +
Sbjct: 20 ISKALDVDSLKATIADLEKQAAEPGLWDDSEHAQQVTSKLSAAQSQLKRLQAVDQRIEDT 79
Query: 159 IDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTE 218
+I+L +EE D + E+ E L + + + E+ LL GE D S + +++GAGG +
Sbjct: 80 KTLIELGQEEGDADSMSEAQEELGNIAHELDDMEVQTLLDGEYDARSAVVTIRSGAGGVD 139
Query: 219 SMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHR 278
+ D+A M+L+MY WA+R GY+ +MD E AGIK AT +VD YA+G E G HR
Sbjct: 140 AADFAQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTHR 199
Query: 279 LVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDS 338
+VRISPFD+ RR T F+AV VIP +++ H+ I +SD+R++ F++ G GGQ NTT S
Sbjct: 200 MVRISPFDNQGRRQTGFSAVEVIPLV-EATDHIDIPDSDIRVDTFQASGPGGQGVNTTYS 258
Query: 339 AVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISW 398
AVRI H+PTG+ + Q+ERSQ QN+A+AM VLQSR+ L+ A +A E + SW
Sbjct: 259 AVRITHLPTGLVVSMQDERSQIQNRAAAMAVLQSRLLVLKHAEEAAKKKELAGDIK-ASW 317
Query: 399 GNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
G+Q+R+YVLHPY+MVKDLRT YE S +V +GD+DGFI
Sbjct: 318 GDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFI 356
>gi|312135785|ref|YP_004003123.1| hypothetical protein Calow_1789 [Caldicellulosiruptor owensensis
OL]
gi|311775836|gb|ADQ05323.1| hypothetical protein Calow_1789 [Caldicellulosiruptor owensensis
OL]
Length = 372
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 153/372 (41%), Positives = 238/372 (63%), Gaps = 12/372 (3%)
Query: 78 LDESEGDWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISRE 137
L+++E D K ++ I ++ L+W L +E + P+ W D ++ ++ ++
Sbjct: 11 LEKAEEDLKEMRVSL--DIDRLENELKW---------LESETSNPDFWQDLENSQKVLQK 59
Query: 138 HGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALL 197
L K++ + + + + +L+ EE + ++ E + LL + RK ++ +++ LL
Sbjct: 60 IKRLKDKIERFQKLYSQWEDLKVLTELSLEEGNHDMAEELEKELLDLERKIEDFKIEVLL 119
Query: 198 SGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRA 257
+G D + + + AGAGGTE+ DWA M+L+MY WA ++GY+V +D +PGE AGIK
Sbjct: 120 NGPYDKNNAILSIHAGAGGTEAQDWAEMLLRMYTRWAAKKGYKVETLDILPGEEAGIKNV 179
Query: 258 TIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESD 317
T+++ GE A+GY KAE GVHRLVRISPFD+ RRHTSFAAV V+P D T ++I E D
Sbjct: 180 TVRIVGENAYGYLKAEKGVHRLVRISPFDAAGRRHTSFAAVEVLPEVED-DTDIEIKEED 238
Query: 318 LRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQL 377
L I+ FR+ GAGGQH N T+SAVRI HIPTGI TCQNERSQH+N+ A+ +L++++ +L
Sbjct: 239 LEIDTFRASGAGGQHVNKTESAVRIKHIPTGIVVTCQNERSQHKNREIALKILKAKLLEL 298
Query: 378 EIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
+ + + + T+I WGNQIR+YV PY +VKD RT EV + ++V++G++D FI
Sbjct: 299 KEKERREKIQKLKGEQTEIGWGNQIRSYVFCPYTLVKDHRTEAEVGNVEAVMDGEIDVFI 358
Query: 438 LSYLSASLDKDE 449
+YL +++E
Sbjct: 359 NAYLKKFRNEEE 370
>gi|160941606|ref|ZP_02088937.1| hypothetical protein CLOBOL_06506 [Clostridium bolteae ATCC
BAA-613]
gi|158435500|gb|EDP13267.1| hypothetical protein CLOBOL_06506 [Clostridium bolteae ATCC
BAA-613]
Length = 339
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 144/323 (44%), Positives = 208/323 (64%), Gaps = 1/323 (0%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
+ +P WD+P + R+ RE +L ++ +A EQ+ + MI++ EEND+ L E
Sbjct: 1 MEEPGFWDEPEQSTRMVRESKNLKDEVDTYRALEQQYEDIQVMIQMGYEENDSSLIPEIE 60
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
E L + + + LLSGE D + + + AGAGGTES DW S++ +MY WA+ +G
Sbjct: 61 EMLEQFKETLENMRMKLLLSGEYDSNNAILRLNAGAGGTESCDWCSILYRMYCRWAESKG 120
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
++ ++D + GE AGIK T+++DGE A+GY ++E GVHRLVRISPF+S +R TSF +
Sbjct: 121 FKAHVLDFLDGEEAGIKSVTVQIDGENAYGYLRSEHGVHRLVRISPFNSAGKRQTSFVSC 180
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
V+PN + +++N D+R++ +RS GAGGQH N T SA+RI H PTGI TCQNERS
Sbjct: 181 DVMPNI-EEDIDIEVNPDDIRVDTYRSSGAGGQHINKTSSAIRITHFPTGIVVTCQNERS 239
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
Q QNK AM +L++++ ++ QA A + DI WG+QIR+YVL PY MVKD RT
Sbjct: 240 QFQNKEKAMQMLKAKLLMVKQEEQAAKAAGIRGDVKDIGWGSQIRSYVLQPYTMVKDHRT 299
Query: 419 NYEVSDPDSVLEGDLDGFILSYL 441
E + D+VL+G +D FI +YL
Sbjct: 300 GEESGNVDAVLDGAIDNFISAYL 322
>gi|393775461|ref|ZP_10363774.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Ralstonia sp. PBA]
gi|392717511|gb|EIZ05072.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Ralstonia sp. PBA]
Length = 300
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 146/294 (49%), Positives = 204/294 (69%), Gaps = 10/294 (3%)
Query: 153 QELLEHIDMIKLAREENDTELELESLEA-LLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
QELLE LAREE D E LE++EA M ++ E + S +DP +C+I++Q
Sbjct: 16 QELLE------LAREEGD-EDTLEAIEADAQAMEAVVEDMEFRRMFSNPMDPANCFIDIQ 68
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AGAGGTE+ DWASM+L+ Y + +R+G++ +++E G++AGIK AT+K++GEYA+G+ +
Sbjct: 69 AGAGGTEACDWASMLLRQYLKYCERKGFKAEVLEESEGDVAGIKSATVKIEGEYAYGFLR 128
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
E GVHRLVR SPFDS RHTSF++V P D S +++N +DLRI+ +R+ GAGGQ
Sbjct: 129 TETGVHRLVRKSPFDSSGGRHTSFSSVFCYPEV-DDSIEIEVNPADLRIDTYRASGAGGQ 187
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQ 391
H N TDSAVRI HIP+GI CQN+RSQH+N+A AM +L+SR+ + E+ ++ +
Sbjct: 188 HINKTDSAVRITHIPSGIVVQCQNDRSQHRNRAEAMTMLKSRLFEFELRKRQAEQDKLEA 247
Query: 392 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
S TD+ WG+QIR+YVL R +KDLRTN E+S+ VL+GDLD FI + L L
Sbjct: 248 SKTDVGWGHQIRSYVLDQSR-IKDLRTNVEISNTQKVLDGDLDPFISASLKQGL 300
>gi|305679674|ref|ZP_07402484.1| peptide chain release factor 2 [Corynebacterium matruchotii ATCC
14266]
gi|305660294|gb|EFM49791.1| peptide chain release factor 2 [Corynebacterium matruchotii ATCC
14266]
Length = 368
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 159/351 (45%), Positives = 228/351 (64%), Gaps = 12/351 (3%)
Query: 91 AIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKA 150
A+ ++ I+K + +L+ R L+A+ P+LWDDP HA +++ E + ++K +++
Sbjct: 11 ALDTTLTSIEKVMNPADLSDRARELAAKAADPSLWDDPEHAQQVTSELSQVQVQLKRLQS 70
Query: 151 FEQELLEHIDMIKLAREEND-TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIE 209
L + M +LA EE + T++ + E L +R E+ +LSGE D I
Sbjct: 71 LRSRLTDLPIMYELAEEEGEGTDI---ADEELTDLRADIDALEVTTMLSGEYDSREALIN 127
Query: 210 VQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGY 269
+++GAGG ++ DWA M+++MY WA+++G +V + D E AGIK AT V GEY +G
Sbjct: 128 IRSGAGGVDAADWAEMLMRMYIRWAEKQGRKVEVYDISYAEEAGIKSATFIVHGEYMYGT 187
Query: 270 AKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAG 329
E GVHRLVRISPFD+ RR TSFA V V+P + + H+ I +S+LR++ +RS G G
Sbjct: 188 LSVEQGVHRLVRISPFDNQARRQTSFAEVEVLPVV-EITDHIDIPDSELRVDVYRSSGPG 246
Query: 330 GQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ---AQMN 386
GQ NTTDSAVR+ HIPTGI TCQNE+SQ QNKASA+ VLQ+++ LE RQ A+++
Sbjct: 247 GQSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASALRVLQAKL--LERKRQEERAELD 304
Query: 387 AEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
A + + SWGNQ+R YVLHP++MVKDLRT +EV DP VL+GDLD F+
Sbjct: 305 A--LGAGGNASWGNQMRNYVLHPFQMVKDLRTGFEVGDPQKVLDGDLDKFL 353
>gi|433646380|ref|YP_007291382.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium
smegmatis JS623]
gi|433296157|gb|AGB21977.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium
smegmatis JS623]
Length = 368
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 157/355 (44%), Positives = 224/355 (63%), Gaps = 4/355 (1%)
Query: 84 DWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
D ++ AA+ ++ +++ L L R+ L E + PNLWDD A +++ E G
Sbjct: 4 DRQADIAALDSTLTTVERVLDVDGLRGRIEKLEHEASDPNLWDDQTRAQKVTSELSHTQG 63
Query: 144 KMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDP 203
+++ V+ Q L + M +LA EE E E+ L +R + E+ LLSGE D
Sbjct: 64 ELRRVEELRQRLDDLPVMYELAAEEGGAEEVAEADAELRKLREDIEAMEVRTLLSGEYDA 123
Query: 204 CSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDG 263
+ +++GAGG ++ DWA M+++MY WA+ Y V + D E AGIK AT V
Sbjct: 124 REALVNIRSGAGGVDAADWAEMLMRMYIRWAEAHKYSVEVFDTSYAEEAGIKSATFAVHA 183
Query: 264 EYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERF 323
YA+G E G HRLVRISPFD+ RR TSFA V V+P + +++ H+ I ESD+R++ +
Sbjct: 184 PYAYGTLSVEQGTHRLVRISPFDNQGRRQTSFAEVEVLPVT-ETTDHIDIPESDVRVDVY 242
Query: 324 RSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSR-VNQLEIARQ 382
RS G GGQ NTTDSAVR+ HIPTGI TCQNE+SQ QNK SAM VLQ++ + + + +
Sbjct: 243 RSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLERKRLEER 302
Query: 383 AQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
A+++A + SWGNQ+R+YVLHPY+MVKDLRT+YEV +P +VL+GD+DGF+
Sbjct: 303 AELDALKGDGGS--SWGNQMRSYVLHPYQMVKDLRTDYEVGNPAAVLDGDIDGFL 355
>gi|429759674|ref|ZP_19292170.1| peptide chain release factor 2 [Veillonella atypica KON]
gi|429179264|gb|EKY20520.1| peptide chain release factor 2 [Veillonella atypica KON]
Length = 330
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 143/323 (44%), Positives = 212/323 (65%), Gaps = 1/323 (0%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
++ P WD+P A IS+E L ++ K ++ + M+ +A EE DT +E E
Sbjct: 1 MSDPTFWDNPDKAREISQEATQLKNSVEGYKQLVSDIEDASVMLDMAIEEEDTSMEGEIK 60
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
+ + ++ +++E+ LL GE D + + AGAGGTE+ DW SM+++MY WA++ G
Sbjct: 61 QFVNGIQEAVEKQEVLLLLGGEYDQNNAILTFHAGAGGTEAQDWCSMLIRMYLRWAEKTG 120
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
+ V LMDE G+ AGIK AT + GE AFGY K+E GVHRLVRISPFD+ RRHTSFAAV
Sbjct: 121 FSVELMDEQLGDEAGIKSATFLIKGENAFGYLKSEKGVHRLVRISPFDAAARRHTSFAAV 180
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
V+P D + + I+ D++++ +R+ GAGGQH N TDSAVR+ H PTGI CQ++RS
Sbjct: 181 DVMPEI-DDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGIVVQCQSQRS 239
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
Q QN+ A+ +L++++ +LE+ +QA++ + + I WG+QIR+YV HPY MVKD RT
Sbjct: 240 QMQNREQALRLLRAKLFELELEKQAELKEQIGGTYQAIEWGSQIRSYVFHPYNMVKDHRT 299
Query: 419 NYEVSDPDSVLEGDLDGFILSYL 441
+ E + +V++G++D FI YL
Sbjct: 300 SVETGNVQAVMDGNIDQFIEGYL 322
>gi|440744233|ref|ZP_20923537.1| peptide chain release factor 2 [Pseudomonas syringae BRIP39023]
gi|440374247|gb|ELQ10983.1| peptide chain release factor 2 [Pseudomonas syringae BRIP39023]
Length = 293
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 143/292 (48%), Positives = 207/292 (70%), Gaps = 4/292 (1%)
Query: 155 LLEHIDMIKLAREENDTELELESLEALLTMRRKSKEK-ELDALLSGELDPCSCYIEVQAG 213
L++ D++ ++ EE D + ++ + A + R+S EK E + SG++DP + Y+++QAG
Sbjct: 5 LVDAKDLLLMSAEEED-QAAVDDVAAEVERLRESLEKLEFRRMFSGDMDPNNAYLDIQAG 63
Query: 214 AGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAE 273
+GGTE+ DWA+++L+MY WA +RG+ T+M+ GE+AGIK AT+ + GEYAFG+ + E
Sbjct: 64 SGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTE 123
Query: 274 VGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHA 333
+GVHRLVR SPFDSG RRHTSF+AV V P D + + IN +DLRI+ +RS GAGGQH
Sbjct: 124 IGVHRLVRKSPFDSGNRRHTSFSAVFVSPEI-DDNIEIDINPADLRIDTYRSSGAGGQHV 182
Query: 334 NTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSL 393
NTTDSAVRI H+PT +CQNERSQH NK +AM +L++R+ + E+ ++ + +
Sbjct: 183 NTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDTK 242
Query: 394 TDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+DI WG+QIR+YVL R +KDLRTN E SD D VL+GD+D ++++ L L
Sbjct: 243 SDIGWGHQIRSYVLDASR-IKDLRTNIERSDCDKVLDGDIDEYLIASLKQGL 293
>gi|415724069|ref|ZP_11469756.1| peptide chain release factor 2 [Gardnerella vaginalis 00703C2mash]
gi|388063003|gb|EIK85601.1| peptide chain release factor 2 [Gardnerella vaginalis 00703C2mash]
Length = 373
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 148/339 (43%), Positives = 217/339 (64%), Gaps = 2/339 (0%)
Query: 99 IKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEH 158
I K + +L + L + +P LWDD HA +++ + + ++K ++A EQ + +
Sbjct: 20 ISKAIDIDSLKSTIADLEKQAAEPGLWDDSEHAQQVTSKLSAAQSQLKRLQAVEQSIEDT 79
Query: 159 IDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTE 218
+I+L +EE D + E+ E L + + + E+ LL GE D S + +++GAGG +
Sbjct: 80 KTLIELGQEEGDADSMSEAQEELGAIAHELDDMEVQTLLDGEYDARSAVVTIRSGAGGVD 139
Query: 219 SMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHR 278
+ D+A M+L+MY WA+R GY+ +MD E AGIK AT +VD YA+G E G HR
Sbjct: 140 AADFAQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTHR 199
Query: 279 LVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDS 338
+VRISPFD+ RR T F+AV VIP +++ H+ I +SD+R++ F++ G GGQ NTT S
Sbjct: 200 MVRISPFDNQGRRQTGFSAVEVIPLV-EATDHIDIPDSDIRVDTFQASGPGGQGVNTTYS 258
Query: 339 AVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISW 398
AVRI H+PTG+ + Q+ERSQ QN+A+AM VLQSR+ L+ A +A E + SW
Sbjct: 259 AVRITHLPTGLVVSMQDERSQIQNRAAAMAVLQSRLLVLKHAEEAAKKKELAGDIK-ASW 317
Query: 399 GNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
G+Q+R+YVLHPY+MVKDLRT YE S +V +GD+DGFI
Sbjct: 318 GDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFI 356
>gi|345875799|ref|ZP_08827588.1| peptide chain release factor 2 [Neisseria weaveri LMG 5135]
gi|343968497|gb|EGV36725.1| peptide chain release factor 2 [Neisseria weaveri LMG 5135]
Length = 367
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 146/343 (42%), Positives = 220/343 (64%), Gaps = 2/343 (0%)
Query: 99 IKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEH 158
I+ L + RL + P+LW+DP A I +E L G + + + ++
Sbjct: 23 IRVYLDYDGKKDRLEEVVGLSEDPDLWNDPKKAQEIGKERKVLEGIVLTLDNIAAGIDDN 82
Query: 159 IDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTE 218
+++++ EEND E + + ++ E E + + D +C+I++ AGAGGTE
Sbjct: 83 RELLEMVVEENDEEGFAAVQADIANLEKQMGELEFKRMFNQPADVNNCFIDITAGAGGTE 142
Query: 219 SMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHR 278
+ DWA M+ +MY +A+R+G++V +++E G+IAGI RATIK++GEYA+G + E G+HR
Sbjct: 143 AEDWAGMLYRMYLRYAERKGFKVEVLEEDEGDIAGINRATIKLEGEYAYGLLRTETGIHR 202
Query: 279 LVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDS 338
LVR SPFDS +RHTSF +V V P D S V+IN +DLRI+ +R+ GAGGQH N TDS
Sbjct: 203 LVRYSPFDSNNKRHTSFCSVFVYPEV-DDSFEVEINPADLRIDTYRASGAGGQHINKTDS 261
Query: 339 AVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISW 398
AVRI H PTGI CQN+RSQH+N+ AM +L++++ +LE+ ++ + S +D+ W
Sbjct: 262 AVRITHNPTGIVVQCQNDRSQHRNRDEAMNMLKAKLFELEMRKRNEEKQSLEDSKSDVGW 321
Query: 399 GNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
G+QIR+YV R +KDLRT+YEV + +V++GDLDGFI + L
Sbjct: 322 GHQIRSYVFDQSR-IKDLRTSYEVGNIKAVMDGDLDGFIEASL 363
>gi|357389817|ref|YP_004904657.1| putative peptide chain release factor 2 [Kitasatospora setae
KM-6054]
gi|311896293|dbj|BAJ28701.1| putative peptide chain release factor 2 [Kitasatospora setae
KM-6054]
Length = 351
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 153/339 (45%), Positives = 212/339 (62%), Gaps = 3/339 (0%)
Query: 99 IKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEH 158
I+ L + + L E P LWDD +A +++ L G++++V+ + +
Sbjct: 4 IEAVLDLDKIRADIATLEEEAAAPTLWDDVANAQKVTSRLSFLQGELRKVETLRGRVEDL 63
Query: 159 IDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTE 218
+ +LA E+D + E+ L+++++ +E E+ LLSGE D + ++A AGG +
Sbjct: 64 GVLFELAEAEDDADTRTEAEAELVSVQKAVEELEVRTLLSGEYDAREALVNIRAEAGGVD 123
Query: 219 SMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHR 278
+ D+A +++MY WA+R GY + D E AGIK AT V YA+G E G HR
Sbjct: 124 AADFAEQLMRMYLRWAERHGYPTEVYDTSYAEEAGIKSATFTVKSPYAYGTLSVEQGTHR 183
Query: 279 LVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDS 338
LVRISPFD+ RR TSFA V V+P ++S HV I+E DLRI+ +R+ G GGQ NTTDS
Sbjct: 184 LVRISPFDNQGRRQTSFAGVEVLPVV-ETSDHVDIDEGDLRIDVYRASGPGGQGVNTTDS 242
Query: 339 AVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISW 398
AVRI H+PTGI +CQNERSQ QNKASAM VLQ+++ LE RQ + A SW
Sbjct: 243 AVRITHLPTGIVVSCQNERSQIQNKASAMNVLQAKL--LERRRQEERAAMDALKDGGSSW 300
Query: 399 GNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
GNQ+R+YVLHPY+MVKDLRT +EV +P VL+GD+DGFI
Sbjct: 301 GNQMRSYVLHPYQMVKDLRTEHEVGNPQGVLDGDIDGFI 339
>gi|410089126|ref|ZP_11285754.1| hypothetical protein AAI_00827 [Pseudomonas viridiflava UASWS0038]
gi|409763653|gb|EKN48609.1| hypothetical protein AAI_00827 [Pseudomonas viridiflava UASWS0038]
Length = 293
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 145/292 (49%), Positives = 206/292 (70%), Gaps = 4/292 (1%)
Query: 155 LLEHIDMIKLAREENDTELELESLEALLTMRRKSKEK-ELDALLSGELDPCSCYIEVQAG 213
L++ D++ ++ EE D + ++ + A + R+S EK E + SGE+D + Y+++QAG
Sbjct: 5 LVDAKDLLLMSAEEED-QAAVDDVAAEVERLRESLEKLEFRRMFSGEMDQNNAYLDIQAG 63
Query: 214 AGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAE 273
+GGTE+ DWA+++L+MY WA +RG+ T+M+ GE+AGIK AT+ + GEYAFG+ + E
Sbjct: 64 SGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTE 123
Query: 274 VGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHA 333
+GVHRLVR SPFDSG RRHTSF+AV V P D + + IN SDLRI+ +RS GAGGQH
Sbjct: 124 IGVHRLVRKSPFDSGNRRHTSFSAVFVSPEI-DDNIEIDINPSDLRIDTYRSSGAGGQHV 182
Query: 334 NTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSL 393
NTTDSAVRI H+PT +CQNERSQH NK +AM +L++R+ + E+ ++ + +
Sbjct: 183 NTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDTK 242
Query: 394 TDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+DI WG+QIR+YVL R +KDLRTN E SD D VL+GDLD ++++ L L
Sbjct: 243 SDIGWGHQIRSYVLDASR-IKDLRTNIERSDCDKVLDGDLDEYLIASLKQGL 293
>gi|152971837|ref|YP_001336946.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238896431|ref|YP_002921169.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|262042532|ref|ZP_06015689.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|330010996|ref|ZP_08306940.1| peptide chain release factor 2 [Klebsiella sp. MS 92-3]
gi|365140380|ref|ZP_09346435.1| peptide chain release factor 2 [Klebsiella sp. 4_1_44FAA]
gi|378980546|ref|YP_005228687.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|402779072|ref|YP_006634618.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|421912593|ref|ZP_16342308.1| Peptide chain release factor 2; programmed frameshift-containing
[Klebsiella pneumoniae subsp. pneumoniae ST258-K26BO]
gi|421915017|ref|ZP_16344643.1| Peptide chain release factor 2; programmed frameshift-containing
[Klebsiella pneumoniae subsp. pneumoniae ST258-K28BO]
gi|425074998|ref|ZP_18478101.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|425083127|ref|ZP_18486224.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|425085634|ref|ZP_18488727.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|425093210|ref|ZP_18496294.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|428150391|ref|ZP_18998166.1| Peptide chain release factor 2; programmed frameshift-containing
[Klebsiella pneumoniae subsp. pneumoniae ST512-K30BO]
gi|150956686|gb|ABR78716.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238548751|dbj|BAH65102.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|259040092|gb|EEW41206.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328534333|gb|EGF60944.1| peptide chain release factor 2 [Klebsiella sp. MS 92-3]
gi|363653696|gb|EHL92645.1| peptide chain release factor 2 [Klebsiella sp. 4_1_44FAA]
gi|364519957|gb|AEW63085.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|402540015|gb|AFQ64164.1| Peptide chain release factor 2 [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|405595201|gb|EKB68591.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|405599446|gb|EKB72622.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|405607666|gb|EKB80635.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|405611142|gb|EKB83923.1| peptide chain release factor 2 [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|410113572|emb|CCM84933.1| Peptide chain release factor 2; programmed frameshift-containing
[Klebsiella pneumoniae subsp. pneumoniae ST258-K26BO]
gi|410122745|emb|CCM87268.1| Peptide chain release factor 2; programmed frameshift-containing
[Klebsiella pneumoniae subsp. pneumoniae ST258-K28BO]
gi|427539666|emb|CCM94304.1| Peptide chain release factor 2; programmed frameshift-containing
[Klebsiella pneumoniae subsp. pneumoniae ST512-K30BO]
Length = 320
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 144/322 (44%), Positives = 210/322 (65%), Gaps = 2/322 (0%)
Query: 124 LWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLT 183
+W++P A + +E SL + + Q L + ++ LA E +D E E++ L T
Sbjct: 1 MWNEPERAQALGKERSSLEAIVDTLDQMSQGLEDVAGLLDLAVEADDEETFNEAVAELDT 60
Query: 184 MRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTL 243
+ K + E + SGE D CY+++QAG+GGTE+ DWASM+++MY WA+ RG++ +
Sbjct: 61 LEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLMRMYLRWAEARGFKTEI 120
Query: 244 MDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPN 303
++E GE+AGIK TIK+ G+YA+G+ + E GVHRLVR SPFDSG RRHTSF++ V P
Sbjct: 121 IEESEGEVAGIKSVTIKIIGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPE 180
Query: 304 SGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNK 363
D ++IN +DLRI+ +R+ GAGGQH N T+SAVRI HIPTG+ CQN+RSQH+NK
Sbjct: 181 VED-DIDIEINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTGLVTQCQNDRSQHKNK 239
Query: 364 ASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVS 423
AM +++++ +LE+ ++ + +DI WG+QIR+YVL R +KDLRT E
Sbjct: 240 DQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVETR 298
Query: 424 DPDSVLEGDLDGFILSYLSASL 445
+ +VL+G LD FI + L A L
Sbjct: 299 NTQAVLDGSLDQFIEASLKAGL 320
>gi|333915124|ref|YP_004488856.1| peptide chain release factor 2 [Delftia sp. Cs1-4]
gi|333745324|gb|AEF90501.1| Peptide chain release factor 2 [Delftia sp. Cs1-4]
Length = 367
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 150/360 (41%), Positives = 226/360 (62%), Gaps = 14/360 (3%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
++Q +++ L + RL ++A L P++W+DP A + +E L G + ++
Sbjct: 16 LSQRAADLRRYLDYDAKYERLRTVNASLEDPSVWNDPKKAQELGKEKKLLDGVVLTLQKL 75
Query: 152 EQELLEHIDMIKLAREEND------TELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
EL ++ ++ ++++EE D E E L+ L+ +E E + E DP +
Sbjct: 76 TTELADNAELFEMSKEEGDETGLLTIEGETAKLQPLI------EELEFRRMFGKEADPLN 129
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
C++++QAGAGGTE+ DWA M+L+ Y +A+R+G++ T+ +E PG+IAGIK ATI ++GEY
Sbjct: 130 CFVDIQAGAGGTEACDWAGMLLRQYLKYAERKGFKATVEEETPGDIAGIKSATIHIEGEY 189
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
A+G + E GVHRLVR SPFDS RHTSFA++ V P D S ++IN SD+R + +R+
Sbjct: 190 AYGLLRTETGVHRLVRKSPFDSSGGRHTSFASLFVYPEI-DDSIQIEINPSDVRTDTYRA 248
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQM 385
GAGGQH N TDSAVR+ H+PTGI CQ+ RSQH N+ A L+S++ + E+ ++
Sbjct: 249 SGAGGQHINKTDSAVRLTHMPTGIVVQCQDGRSQHSNRDVAWQRLRSKLYEHEMQKRMVE 308
Query: 386 NAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ + TD+ WG+QIR+YVL R +KDLRTN E+S VL+GDLD FI + L L
Sbjct: 309 QQKLEDTKTDVGWGHQIRSYVLDNSR-IKDLRTNVEISATQKVLDGDLDAFIEASLKQGL 367
>gi|373488399|ref|ZP_09579064.1| bacterial peptide chain release factor 2 (bRF-2) [Holophaga foetida
DSM 6591]
gi|372006724|gb|EHP07356.1| bacterial peptide chain release factor 2 (bRF-2) [Holophaga foetida
DSM 6591]
Length = 368
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 152/327 (46%), Positives = 212/327 (64%), Gaps = 3/327 (0%)
Query: 124 LWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLT 183
WDDP A + + G L + K L + ++L+R++ D E E++EA +
Sbjct: 45 FWDDPDAAKPVLKARGLLTEDIATAKRLNGGLDDLETALELSRDDADMLGEAEAVEA--S 102
Query: 184 MRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTL 243
+R+ + EL +LSGELD + + + GAGGTES DWA+M+L+MY + + +G++ +
Sbjct: 103 LRQDIEGAELRMMLSGELDQMNAIVAIAPGAGGTESCDWAAMLLRMYLRYCESKGWKTEM 162
Query: 244 MDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPN 303
+D G+ AG+K AT V YA+GY +AE GVHRLVRISPFDS KRRHTSFAAV V P
Sbjct: 163 IDYQDGDEAGVKGATFIVTAPYAYGYLRAEAGVHRLVRISPFDSAKRRHTSFAAVYVSPE 222
Query: 304 SGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNK 363
D + +V I + DLRI+ FR+ GAGGQH N T+SAVR H+PTGI +CQNERSQ +N+
Sbjct: 223 L-DDTINVDIPDKDLRIDVFRASGAGGQHVNRTESAVRFTHLPTGIVVSCQNERSQIKNR 281
Query: 364 ASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVS 423
A+A+ VLQ R+ ++ + A + +D++WG+QIR+YVL PY+MVKD RTN+E S
Sbjct: 282 ATALKVLQGRLYEVRLREHEARVAAASGEKSDVAWGSQIRSYVLQPYQMVKDHRTNWETS 341
Query: 424 DPDSVLEGDLDGFILSYLSASLDKDEG 450
VL+GDLD F+ + L A K EG
Sbjct: 342 QTQKVLDGDLDDFVRAQLLAKSLKTEG 368
>gi|146296348|ref|YP_001180119.1| peptide chain release factor 2 [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145409924|gb|ABP66928.1| peptide chain release factor 2 [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 323
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 141/289 (48%), Positives = 202/289 (69%), Gaps = 1/289 (0%)
Query: 161 MIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESM 220
+ +L EE++ E+ E + L+ + RK +E +L+ LL+G D + + + AGAGGTE+
Sbjct: 34 LTQLCIEESNIEMSDELEKDLIDLERKIEEFKLEILLNGPYDKNNAILSIHAGAGGTEAQ 93
Query: 221 DWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLV 280
DWA M+L+MY WA ++GY+V +D +PGE AGIK T+++ GE A+GY KAE GVHRLV
Sbjct: 94 DWAEMLLRMYTRWAAKKGYKVETLDILPGEEAGIKNVTVRIVGENAYGYLKAEKGVHRLV 153
Query: 281 RISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAV 340
RISPFD+ RRHTSFAAV V+P D T ++I E DL I+ FR+ GAGGQH N T+SAV
Sbjct: 154 RISPFDAAGRRHTSFAAVEVLPEVED-DTDIEIKEEDLEIDTFRASGAGGQHVNKTESAV 212
Query: 341 RIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGN 400
RI HIPTGI TCQNERSQH+N+ A+ +L++++ +L + + + T+I WGN
Sbjct: 213 RIKHIPTGIVVTCQNERSQHKNREIALKILKAKLLELREKERREKIQKLKGEQTEIGWGN 272
Query: 401 QIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKDE 449
QIR+YV PY +VKD RT+ EV + ++V++G++D FI +YL +++E
Sbjct: 273 QIRSYVFCPYTLVKDHRTDAEVGNVEAVMDGEIDVFINAYLKKFRNEEE 321
>gi|289626068|ref|ZP_06459022.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
syringae pv. aesculi str. NCPPB 3681]
gi|289646233|ref|ZP_06477576.1| peptide chain release factor 2, programmed frameshift [Pseudomonas
syringae pv. aesculi str. 2250]
Length = 293
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 144/292 (49%), Positives = 205/292 (70%), Gaps = 4/292 (1%)
Query: 155 LLEHIDMIKLAREENDTELELESLEALLTMRRKSKEK-ELDALLSGELDPCSCYIEVQAG 213
L + D++ ++ EE D + ++ + + R+S EK E + SGE+DP + Y+++QAG
Sbjct: 5 LADAKDLLLMSAEEED-QAAVDDVATEVERLRESLEKLEFRRMFSGEMDPNNAYLDIQAG 63
Query: 214 AGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAE 273
+GGTE+ DWA+++L+MY WA +RG+ T+M+ GE+AGIK AT+ + GEYAFG+ + E
Sbjct: 64 SGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTE 123
Query: 274 VGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHA 333
+GVHRLVR SPFDSG RRHTSF+AV V P D + + IN SDLRI+ +RS GAGGQH
Sbjct: 124 IGVHRLVRKSPFDSGNRRHTSFSAVFVSPEI-DDNIEIDINPSDLRIDTYRSSGAGGQHV 182
Query: 334 NTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSL 393
NTTDSAVRI H+PT +CQNERSQH NK +AM +L++R+ + E+ ++ + +
Sbjct: 183 NTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDTK 242
Query: 394 TDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+DI WG+QIR+YVL R +KDLRTN E SD D VL+GD+D ++++ L L
Sbjct: 243 SDIGWGHQIRSYVLDASR-IKDLRTNIERSDCDKVLDGDIDEYLIASLKQGL 293
>gi|304317582|ref|YP_003852727.1| hypothetical protein Tthe_2166 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779084|gb|ADL69643.1| hypothetical protein Tthe_2166 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 365
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 150/364 (41%), Positives = 224/364 (61%), Gaps = 11/364 (3%)
Query: 83 GDWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLM 142
D+K+ + +I+ + L + L + + ++ +P+ W+D + +S++ L
Sbjct: 3 ADYKTEVLNLIDTIKEMGASLDIEGLKREVAEIDKKMAEPDFWNDLQKSQELSKKLKDLK 62
Query: 143 GKMKEVKAFEQELLEHID-MIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGEL 201
+ E ++ E+ L E ++ +I+L EE D L E E ++ +K + ++ LLSG
Sbjct: 63 ELISEYESIEK-LCEDLNALIELGIEEGDESLSQEVHEEYKSLSKKINDMKIKTLLSGPY 121
Query: 202 DPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKV 261
D + + + AGAGGTE+ DW M+L+MY WA + Y V +D +PG+ AG+K TI V
Sbjct: 122 DRNNAILSIHAGAGGTEAQDWTEMLLRMYMRWASSKNYEVETVDYLPGDDAGVKSVTIMV 181
Query: 262 DGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIE 321
G +A+GY K E GVHRLVRISPFD+ RRHTSFA V V+P D V I DL+I+
Sbjct: 182 KGAFAYGYLKGEAGVHRLVRISPFDAAGRRHTSFALVEVLPEI-DDDIKVDIRPEDLKID 240
Query: 322 RFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIAR 381
+RS GAGGQH N T+SA+RI HIPTGI CQ+ERSQ QN+ +AM +L++++ L I
Sbjct: 241 TYRSSGAGGQHVNKTESAIRITHIPTGIIVQCQSERSQMQNRETAMKMLKAKLMDLMIKE 300
Query: 382 QAQ----MNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
Q + + EH ++ WGNQIR+YV PY +VKD RTN+EV + ++V++GD+D FI
Sbjct: 301 QKEKIEDLKGEHKEA----GWGNQIRSYVFQPYTLVKDHRTNFEVGNVNAVMDGDIDEFI 356
Query: 438 LSYL 441
+YL
Sbjct: 357 NAYL 360
>gi|421760901|ref|ZP_16197712.1| peptide chain release factor 2 [Bartonella bacilliformis INS]
gi|411174132|gb|EKS44168.1| peptide chain release factor 2 [Bartonella bacilliformis INS]
Length = 322
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 148/307 (48%), Positives = 209/307 (68%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE SL + ++ F Q+L E I++I + EE D ++ ++ + ++ + ++++D
Sbjct: 2 RERQSLEDSINSIELFTQKLEESIELIAMGEEERDVDVIADAENTIRELKNEIDKRQIDI 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+E+ AGAGGTES DWA+M+L+MY W ++ +V +++ GE AGIK
Sbjct: 62 LLSGEADSNDTYLEIHAGAGGTESQDWAAMLLRMYIRWVEQHKMKVEVLEINDGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI + G A+G K E GVHRLVRISP+DS RRHTSFA+V V P D + V ++E
Sbjct: 122 SATILIKGHNAYGMIKTESGVHRLVRISPYDSNARRHTSFASVWVYP-VVDDNIKVDVSE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD+RI+ +R+ GAGGQH NTTDSAVRI HI TGI CQ ERSQH+N+A+A +L++R+
Sbjct: 181 SDVRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNRATAWSMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ ++ + S T+I WG+QIR+YVL PY++VKDLRT E +DP SVL GDLD
Sbjct: 241 EEELKKREEETNAVEASKTEIGWGHQIRSYVLQPYQLVKDLRTGIENTDPQSVLNGDLDR 300
Query: 436 FILSYLS 442
FI + L+
Sbjct: 301 FIEAALA 307
>gi|295707157|ref|YP_003600232.1| peptide chain release factor 2 [Bacillus megaterium DSM 319]
gi|294804816|gb|ADF41882.1| peptide chain release factor 2 [Bacillus megaterium DSM 319]
Length = 326
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 147/328 (44%), Positives = 209/328 (63%), Gaps = 3/328 (0%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDM-IKLAREENDTELELES 177
++ PN W+D A + E L + + + E E++ + +L +EE D +L E
Sbjct: 1 MSDPNFWNDQQAAQTVINEANGLKDAVNQFNHLD-ETYENLQVSYELVKEEYDEDLAEEL 59
Query: 178 LEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRR 237
+ L + + EL LLS D + +E+ GAGGTES DW SM+L+MY WA+++
Sbjct: 60 VSELKELISGMNDFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKK 119
Query: 238 GYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAA 297
G++V +D +PG+ AGIK T+ + G A+GY KAE GVHRLVRISPFDS RRHTSF +
Sbjct: 120 GFKVETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS 179
Query: 298 VAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNER 357
++P D + + I DL+++ +R+ GAGGQH NTTDSAVRI H+PT + +CQ ER
Sbjct: 180 CDIMPEFNDEIS-IDIRTEDLKVDTYRASGAGGQHINTTDSAVRITHLPTNVVVSCQTER 238
Query: 358 SQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLR 417
SQ +N+ AM +L+S++ QLEI +Q + AE DI WG+QIR+YV HPY +VKD R
Sbjct: 239 SQIKNREQAMKMLKSKLYQLEIEKQQEQLAEIRGEQKDIGWGSQIRSYVFHPYSLVKDHR 298
Query: 418 TNYEVSDPDSVLEGDLDGFILSYLSASL 445
TN EV + SV++GDLD FI +YL + +
Sbjct: 299 TNTEVGNTQSVMDGDLDPFIDAYLRSHI 326
>gi|27379419|ref|NP_770948.1| peptide chain release factor 2 [Bradyrhizobium japonicum USDA 110]
gi|27352570|dbj|BAC49573.1| peptide chain release factor 2 [Bradyrhizobium japonicum USDA 110]
Length = 322
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 154/307 (50%), Positives = 208/307 (67%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
+E SL + + EQEL + I MI+L E D + E+ AL ++++ +EL+A
Sbjct: 2 QERTSLEDSLSGIGKVEQELEDDIGMIELGEAEGDDGVVAEAEAALKALKKEVARRELEA 61
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+EV AGAGGTES DWA M+L+MY WA+ G++V ++E GE AGIK
Sbjct: 62 LLSGEADRFDSYLEVHAGAGGTESQDWAQMLLRMYTRWAETHGFKVEYLEESEGEEAGIK 121
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI+V G A+G+ K E GVHRLVRISPFDS RRHTSF++V V P D S + I E
Sbjct: 122 SATIQVSGHNAYGWLKTEAGVHRLVRISPFDSNARRHTSFSSVQVFPVI-DDSIKIDIKE 180
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
SD+R++ RSGGAGGQH N T+SAVR+ HIPTG+ CQ RSQH+N+A A +L++R+
Sbjct: 181 SDVRVDTMRSGGAGGQHVNKTESAVRLTHIPTGVAVVCQAGRSQHKNRAQAWDMLRARLY 240
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
++E+ ++ + A + TDI WG+QIR+YVL PY+MVKDLRT + SD VL G+LD
Sbjct: 241 EMELKKREEKAAADQAAKTDIGWGHQIRSYVLQPYQMVKDLRTGVQTSDTSGVLNGELDD 300
Query: 436 FILSYLS 442
F+ + L+
Sbjct: 301 FMAATLA 307
>gi|333367861|ref|ZP_08460092.1| peptide chain release factor RF2 [Psychrobacter sp. 1501(2011)]
gi|332978282|gb|EGK15010.1| peptide chain release factor RF2 [Psychrobacter sp. 1501(2011)]
Length = 325
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 145/327 (44%), Positives = 210/327 (64%), Gaps = 2/327 (0%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
+ P LW+DP A +IS+E L + + E L + M++LA E +D L +
Sbjct: 1 MESPELWNDPERATKISKEKSQLDAIINTITGLETTLEDAAAMLELAVEADDEGLLSDVQ 60
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
+ L + + ++ E + +GE+DP +C++++Q+G+GGTE+ DWA M+L+MY W + G
Sbjct: 61 QELNAAQAQVEDLEFKRMFNGEMDPNNCFVDIQSGSGGTEAQDWAEMLLRMYTRWCESHG 120
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
++V + + G +AG+K A+ KV G+YAFG+ + E GVHRLVR SPFDS RHTSFAAV
Sbjct: 121 FKVDVTEVSAGSVAGVKSASFKVTGDYAFGWLRTETGVHRLVRKSPFDSNNGRHTSFAAV 180
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
V P + IN +DLRI+ +RS GAGGQH NTTDSAVRI H PT CQNERS
Sbjct: 181 FVSPEID-DDIDIDINPADLRIDTYRSSGAGGQHVNTTDSAVRITHEPTNTVVQCQNERS 239
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
QH NKA+AM +L++++ +LE+ ++ + + +D+ WG+QIR+YVL R +KDLRT
Sbjct: 240 QHGNKATAMKMLRAKLYELEMQKRMEKQQAVEDNKSDVGWGSQIRSYVLDDSR-IKDLRT 298
Query: 419 NYEVSDPDSVLEGDLDGFILSYLSASL 445
E + +VL+GDLD FI + L A L
Sbjct: 299 GVETFNTGAVLDGDLDQFIEASLKAGL 325
>gi|53802400|ref|YP_112836.1| peptide chain release factor 2, programmed frameshift, partial
[Methylococcus capsulatus str. Bath]
gi|53756161|gb|AAU90452.1| peptide chain release factor 2, programmed frameshift
[Methylococcus capsulatus str. Bath]
Length = 365
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 151/336 (44%), Positives = 220/336 (65%), Gaps = 4/336 (1%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL + EL P +WD+P A + +E L G + + + + ++++LA EE+D
Sbjct: 33 RLTEVLRELEDPRIWDNPERAQALGKERTQLEGVVNRLNEIAAGIDDAAELLQLAVEEDD 92
Query: 171 TELELESLEALLTMRRKS-KEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
E +ES+ A L E E + SGE+DP + ++++QAG+GGTE+ DWA M+ +M
Sbjct: 93 -EDSVESVAADLAHYESVVAEMEFRRMFSGEMDPNNAFLDIQAGSGGTEAQDWAQMLERM 151
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y W +R+G++ L++E PGE+AGIK ATI+ +GEYA+G+ + E GVHRLVR SPFDSG
Sbjct: 152 YLRWGERKGFKTELVEESPGEVAGIKSATIRFEGEYAYGWLRTETGVHRLVRKSPFDSGN 211
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RRHTSF++V V P + + IN +DLR + +R+ GAGGQH N T+SAVRI H+PTGI
Sbjct: 212 RRHTSFSSVFVSPEID-DNIDIDINPADLRTDVYRASGAGGQHVNRTESAVRITHLPTGI 270
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHP 409
CQN+RSQH N+ M L++++ +LE+ ++ + S +DI WG+QIR+YVL
Sbjct: 271 VVQCQNQRSQHANRDWCMKQLRAKLYELEMQKRNTEKQKLEDSKSDIGWGSQIRSYVLDQ 330
Query: 410 YRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRTN E +P +VL+GDLD FI + L + L
Sbjct: 331 SR-IKDLRTNVETGNPQAVLDGDLDMFIEASLKSGL 365
>gi|299144433|ref|ZP_07037513.1| peptide chain release factor 2 [Peptoniphilus sp. oral taxon 386
str. F0131]
gi|298518918|gb|EFI42657.1| peptide chain release factor 2 [Peptoniphilus sp. oral taxon 386
str. F0131]
Length = 348
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 150/330 (45%), Positives = 210/330 (63%), Gaps = 13/330 (3%)
Query: 124 LWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND------TELELES 177
WD+ +A ++ RE K+ + + + E D+I L E+D +L+LE+
Sbjct: 26 FWDNAENAQKVIREQNHYQSKIDKYDKLIKSINEAEDLIDLMEMEDDYSFYGDLKLDLEN 85
Query: 178 LEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRR 237
+E L S + +L+ LL+GE D +C I + AGAGGTE+ DWASM+ +MY +A++R
Sbjct: 86 IEKL------SNDFKLETLLNGEYDSNNCIISIHAGAGGTEAQDWASMLNRMYVRYAEKR 139
Query: 238 GYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAA 297
G+RV +D + E AGIK T+ + G+ A+GY K E GVHRLVRISPFD+ KRRHTSFA+
Sbjct: 140 GFRVETLDMLKEEEAGIKSVTLLITGDNAYGYLKGEKGVHRLVRISPFDANKRRHTSFAS 199
Query: 298 VAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNER 357
+ V P D V+I DL+I+ +RS GAGGQH NTTDSAVRI HIPTGI CQNER
Sbjct: 200 LDVYPQL-DDDNEVEIKAEDLKIDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVQCQNER 258
Query: 358 SQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLR 417
SQ QN+ AM +L++++ L + + + + + I+WG+QIR+YV PY +VKD R
Sbjct: 259 SQIQNRDKAMNMLKAKLIALAEEEKKEKIEDLQGNYSQIAWGSQIRSYVFQPYTLVKDHR 318
Query: 418 TNYEVSDPDSVLEGDLDGFILSYLSASLDK 447
TN E+ D + V++G LD FI SYL + K
Sbjct: 319 TNTEIGDVNKVMDGYLDEFINSYLQLNASK 348
>gi|90413184|ref|ZP_01221180.1| putative peptide chain release factor 2 [Photobacterium profundum
3TCK]
gi|90325875|gb|EAS42327.1| putative peptide chain release factor 2 [Photobacterium profundum
3TCK]
Length = 353
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 147/335 (43%), Positives = 217/335 (64%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
+L ++AEL +P +W++P A + + +L ++ + + + + +++LA EE+D
Sbjct: 21 QLEEVNAELEQPAVWNEPERAQALGKSRAALEAVVETIDQLDLGVEDVAGLLELAVEEDD 80
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
E E L + K + E + SGE D CYI++QAG+GGTE+ DW SM+L+MY
Sbjct: 81 QETFDEIEPELAELEAKLAKLEFRRMFSGEYDSSDCYIDLQAGSGGTEAQDWTSMMLRMY 140
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA +G++ +++ G++AG+K ATI++ GEYA+G+ + E GVHRLVR SPFDSG R
Sbjct: 141 LRWADAKGFKTEIIEVSAGDVAGLKSATIRLVGEYAYGWLRTETGVHRLVRKSPFDSGGR 200
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSFA+ V P D+ + IN SDLRI+ +R+ GAGGQH NTT+SAVRI H+PT I
Sbjct: 201 RHTSFASAFVYPEIDDNIV-IDINPSDLRIDVYRASGAGGQHVNTTESAVRITHVPTNIV 259
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+NK AM L++++ + E+ +Q + S +DI WG+QIR+YVL
Sbjct: 260 VQCQNDRSQHKNKDQAMKQLKAKLFEFEMQKQNAEKQANEDSKSDIGWGSQIRSYVLDDS 319
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E + +VL+GDLD FI + L + L
Sbjct: 320 R-IKDLRTGVENRNTQAVLDGDLDRFIEASLKSGL 353
>gi|313901293|ref|ZP_07834780.1| peptide chain release factor 2 [Clostridium sp. HGF2]
gi|312953901|gb|EFR35582.1| peptide chain release factor 2 [Clostridium sp. HGF2]
Length = 349
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 150/336 (44%), Positives = 212/336 (63%), Gaps = 3/336 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
++ L++ + + W+DP HA + R+ + ++ + L+ + L +E+ D
Sbjct: 16 KIQELTSMTLQDDFWNDPQHAQTLIRQLNGIKDIVESYEKLNSALIGLEETHDLLKEDYD 75
Query: 171 TELELESLEA-LLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQM 229
E+ E EA L M + + E+ LLS E D S +E+ GAGGTES DWA M+ +M
Sbjct: 76 DEI-FELFEAEYLEMEKNFDDFEIKILLSHEYDHSSAILELHPGAGGTESCDWADMLYRM 134
Query: 230 YKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGK 289
Y WA+++G++V+++D +PG+ AGIK T V+G+ A+GY KAE GVHRLVRISPFDSG
Sbjct: 135 YSRWAEKKGFKVSVLDYLPGDEAGIKSVTFLVEGDMAYGYLKAEKGVHRLVRISPFDSGG 194
Query: 290 RRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGI 349
RRHTSFA++ V+P ++ ++I DL +E R+ GAGGQH N TDSAVR++H PTG+
Sbjct: 195 RRHTSFASLDVMPQF-NNEIEIEIKPEDLIVETKRASGAGGQHINKTDSAVRMVHKPTGL 253
Query: 350 TATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHP 409
A CQN RSQH+N+ A+ VL+SR+ Q I Q AE WG+QIR+YV HP
Sbjct: 254 VAICQNGRSQHENREEALRVLKSRLYQKMIEEQEARLAEIKGEQKANEWGSQIRSYVFHP 313
Query: 410 YRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
Y MVKD RT+ E SD V++GDLD FI +YL +
Sbjct: 314 YSMVKDHRTSCETSDVQGVMDGDLDAFIFAYLKTQI 349
>gi|395791000|ref|ZP_10470459.1| peptide chain release factor 2 [Bartonella alsatica IBS 382]
gi|395409296|gb|EJF75895.1| peptide chain release factor 2 [Bartonella alsatica IBS 382]
Length = 322
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 145/307 (47%), Positives = 213/307 (69%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L ++++++F + L E I++I + EE+D E+ ++ + ++ + +++++D
Sbjct: 3 RERQRLDDSIRDIRSFTKTLEECIELIAMGEEESDIEVITDAENTIRHLKNEIEKRQIDV 62
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE+D Y+EV AGAGGTES DWASM+L+MY WA++ ++ +++ GE AGIK
Sbjct: 63 LLSGEVDSNDTYLEVHAGAGGTESQDWASMLLRMYMRWAEQHKMKIEILEIHDGEEAGIK 122
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
ATI + G A+G K E GVHRLVRISPFDS +RHTSFA++ + P D + V + E
Sbjct: 123 SATILIKGHNAYGMLKTESGVHRLVRISPFDSNAKRHTSFASIWIYP-VIDDNIEVDVTE 181
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
+D+RI+ +R+ GAGGQH NTTDSAVRI HI TGI CQ ERSQH+N+A+A +L++R+
Sbjct: 182 ADVRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQMERSQHKNRATAWSMLRARLY 241
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ ++ + S T+I WG+QIR+YVL PY++VKDLRT E +DP SVL G+LD
Sbjct: 242 EEELKKREEETNAVEASKTEIGWGHQIRSYVLQPYQLVKDLRTGVENTDPQSVLNGNLDA 301
Query: 436 FILSYLS 442
FI + L+
Sbjct: 302 FIEAALA 308
>gi|225387178|ref|ZP_03756942.1| hypothetical protein CLOSTASPAR_00930 [Clostridium asparagiforme
DSM 15981]
gi|225046726|gb|EEG56972.1| hypothetical protein CLOSTASPAR_00930 [Clostridium asparagiforme
DSM 15981]
Length = 338
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 146/323 (45%), Positives = 209/323 (64%), Gaps = 1/323 (0%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
+ +P WDDP + R+ RE +L ++ + EQE + MI++ EEND + +
Sbjct: 1 MEEPGFWDDPEKSTRMVREVKNLKDDVETYRELEQEYDDIQVMIQMGYEENDASVIPDIQ 60
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
E L + ++ L LLSGE D + + + AGAGGTES DW SM+ +MY WA+R+G
Sbjct: 61 EMLDHFIKTLEDMRLKLLLSGEYDKNNAILRLNAGAGGTESCDWCSMLYRMYCRWAERKG 120
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
++ ++D + G+ AGIK TI+V+GE A+GY ++E GVHRLVRISPF++ +R TSF +
Sbjct: 121 FKYEVLDFLDGDEAGIKSVTIQVNGENAYGYLRSEHGVHRLVRISPFNAAGKRQTSFVSC 180
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
V+P+ ++ V++N D+R++ +RS GAGGQH N T SA+RI H+PTGI TCQNERS
Sbjct: 181 DVMPDI-EADLDVEVNPDDIRVDTYRSSGAGGQHINKTSSAIRITHMPTGIVVTCQNERS 239
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
Q QNK AM +L++++ L+ A A + DI WGNQIR+YVL PY MVKD RT
Sbjct: 240 QFQNKDKAMQMLKAKLYMLKQQESAAKAAGIRGEVKDIGWGNQIRSYVLQPYTMVKDHRT 299
Query: 419 NYEVSDPDSVLEGDLDGFILSYL 441
E + D+VL+G +D FI +YL
Sbjct: 300 GEESGNVDAVLDGSIDSFISAYL 322
>gi|118594576|ref|ZP_01551923.1| Peptide chain release factor 2 [Methylophilales bacterium HTCC2181]
gi|118440354|gb|EAV46981.1| Peptide chain release factor 2 [Methylophilales bacterium HTCC2181]
Length = 355
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 145/333 (43%), Positives = 216/333 (64%), Gaps = 16/333 (4%)
Query: 112 LNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDT 171
+ LLS + P W D + +I +E L + + + +L ++ ++ +A EEND
Sbjct: 24 IKLLSIQQEDPKTWSDRALSQKIGKEKKVLEDIVHQADSLISDLADNQELFDMAVEEND- 82
Query: 172 ELELESLEALLTMRRKSK--EKELDA-----LLSGELDPCSCYIEVQAGAGGTESMDWAS 224
L L T++ ++ EK +D + S +DP +C+++ Q+G+GGTE+ DWA+
Sbjct: 83 ------LNTLTTIKSDTEKLEKSVDDIEFKRMFSHPMDPNNCFVDFQSGSGGTEAQDWAN 136
Query: 225 MVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISP 284
M+ +MY +A+R+ +++ +++ GE+AGIK AT+K+ G+YAFG+ + E G+HRLVR SP
Sbjct: 137 MLFRMYTRYAERKNFKIEVLEYTEGEVAGIKGATLKIIGDYAFGFLRTESGIHRLVRKSP 196
Query: 285 FDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIH 344
FDSG RRHTSFA V V P D S + IN SDLRI+ +R+ GAGGQH N TDSAVRI H
Sbjct: 197 FDSGSRRHTSFAGVNVYPEI-DESIDIDINPSDLRIDTYRASGAGGQHINKTDSAVRITH 255
Query: 345 IPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRT 404
+PT CQN+RSQH+NKA AM +L++++ +E++++ + + TDI WG+QIR+
Sbjct: 256 VPTNTVVQCQNDRSQHRNKAQAMNMLKAQLYAIELSKRNEEKQAMEDAKTDIGWGHQIRS 315
Query: 405 YVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
YVL R +KDLRTN EV + VL+GDLD FI
Sbjct: 316 YVLDQSR-IKDLRTNLEVGNTQGVLDGDLDMFI 347
>gi|289208167|ref|YP_003460233.1| hypothetical protein TK90_0982 [Thioalkalivibrio sp. K90mix]
gi|288943798|gb|ADC71497.1| conserved hypothetical protein [Thioalkalivibrio sp. K90mix]
Length = 364
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 143/337 (42%), Positives = 223/337 (66%), Gaps = 6/337 (1%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL + EL P++W+DP A + +E L + ++ +L + D++++A ++D
Sbjct: 32 RLEEVQRELENPDIWNDPDRAQALGKERAQLENIVVNIREIGTQLDDSRDLLEMAEADDD 91
Query: 171 TELE--LESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQ 228
E +E+ LT R ++ E + SG++D + Y+++QAG+GGTE+ DWA+++L+
Sbjct: 92 AETASAVEADVEALTARVEALE--FRRMFSGDMDEANAYLDIQAGSGGTEAQDWANILLR 149
Query: 229 MYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSG 288
MY WA+ G++ +++ GE+AGIK AT++++GEYAFG+ + E GVHRLVR SPFDSG
Sbjct: 150 MYLRWAEAHGFKTEIIELSEGEVAGIKSATVRIEGEYAFGWLRTETGVHRLVRKSPFDSG 209
Query: 289 KRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTG 348
RRHTSFA+V P D S ++IN +DLR++ +R+ GAGGQH N T+SA+RI H P+G
Sbjct: 210 NRRHTSFASVFASPEV-DDSFEIEINPADLRVDTYRASGAGGQHVNRTESAIRITHEPSG 268
Query: 349 ITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLH 408
I CQN+RSQH+N+ +AM L++++ ++EI ++ + +DI WG+QIR+YVL
Sbjct: 269 IVVACQNDRSQHKNRDTAMKQLKAKLYEMEIQKRNAEKQAAEDAKSDIGWGSQIRSYVLD 328
Query: 409 PYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT EV + +VL+GDLD FI + L + L
Sbjct: 329 QSR-IKDLRTGVEVGNTQAVLDGDLDQFIEASLKSGL 364
>gi|71153099|sp|Q7VNG1.2|RF2_HAEDU RecName: Full=Peptide chain release factor 2; Short=RF-2
Length = 365
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 148/360 (41%), Positives = 223/360 (61%), Gaps = 2/360 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
++ A + + Q+I+ L + RL ++AEL +P +W+ P A + +E +L +
Sbjct: 8 RTQLADLTERTQLIRGYLDFDTKVERLEEVNAELEQPEIWNTPEKAQTLGKERSTLEMVV 67
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
+ A Q + + +I+LA E D + E+ + K + E + SG D
Sbjct: 68 NTINALIQGIEDVEALIELAVEAEDEQTLYEAQIEADELATKLAKLEFQRMFSGPYDATD 127
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
CY+++QAG+GGTE+ DW M+L+MY WA+ +G++ L++ G++AG+K ATI++ GEY
Sbjct: 128 CYLDLQAGSGGTEAQDWTEMLLRMYLRWAESKGFKTELIEVSDGDVAGLKSATIRITGEY 187
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
AFG+ + E G+HRLVR SPFDS RRHTSFAA V P D ++IN +DLRI+ +R+
Sbjct: 188 AFGWLRTETGIHRLVRKSPFDSNNRRHTSFAAAFVYPEV-DDDVDIEINPADLRIDVYRA 246
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQM 385
GAGGQH N T+SAVRI H+P+GI CQN RSQHQNK M L++++ ++E+ ++
Sbjct: 247 SGAGGQHVNKTESAVRITHMPSGIVVQCQNGRSQHQNKDQCMKQLRAKLYEMEMMKKNAE 306
Query: 386 NAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
++ +DI WG+QIR+YVL R +KDLRT E + +VL+GDLD FI + L A L
Sbjct: 307 KQAMEENKSDIGWGSQIRSYVLDDSR-IKDLRTGVENRNTQAVLDGDLDRFIEASLKAGL 365
>gi|138896684|ref|YP_001127137.1| peptide chain release factor 2 [Geobacillus thermodenitrificans
NG80-2]
gi|134268197|gb|ABO68392.1| Bacterial peptide chain release factor 2, RF-2 [Geobacillus
thermodenitrificans NG80-2]
Length = 327
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 150/328 (45%), Positives = 210/328 (64%), Gaps = 9/328 (2%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIK----LAREENDTELELES 177
P WDD A I E +L KE+ + L E D ++ L +EE D EL+ E
Sbjct: 4 PGFWDDQKAAQAIISEANAL----KELVGEFESLAERFDNLEVTYELLKEEPDDELQAEL 59
Query: 178 LEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRR 237
+E + + + EL LL+ D + +E+ GAGGTES DWASM+L+MY WA+++
Sbjct: 60 VEEAKKLTKDFSQFELQLLLNEPYDQNNAILELHPGAGGTESQDWASMLLRMYTRWAEKK 119
Query: 238 GYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAA 297
G++V +D +PGE AG+K T+ + G A+GY KAE GVHRLVRISPFD+ RRHTSF +
Sbjct: 120 GFKVETLDYLPGEEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVS 179
Query: 298 VAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNER 357
V+P D + ++I +L+I+ +RS GAGGQH NTTDSAVRI H+PTGI TCQ+ER
Sbjct: 180 CEVVPEM-DDNIEIEIRPEELKIDTYRSSGAGGQHVNTTDSAVRITHLPTGIVVTCQSER 238
Query: 358 SQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLR 417
SQ +N+ AM +L++++ Q ++ Q AE +I WG+QIR+YV HPY +VKD R
Sbjct: 239 SQIKNREKAMNMLKAKLYQKKMEEQQAELAELRGEQKEIGWGSQIRSYVFHPYSLVKDHR 298
Query: 418 TNYEVSDPDSVLEGDLDGFILSYLSASL 445
TN EV + +V++G++D FI +YL A L
Sbjct: 299 TNVEVGNVQAVMDGEIDVFIDAYLRAKL 326
>gi|295398527|ref|ZP_06808561.1| peptide chain release factor RF2 [Aerococcus viridans ATCC 11563]
gi|294973250|gb|EFG49043.1| peptide chain release factor RF2 [Aerococcus viridans ATCC 11563]
Length = 353
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 146/329 (44%), Positives = 210/329 (63%), Gaps = 1/329 (0%)
Query: 117 AELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELE 176
A++ +P WDD A + + +L E E E + ++ +EE D +L E
Sbjct: 22 ADMVQPGFWDDSEKAQSVIDANNALKKVYDEFNNLADEYEELTLLNEMVKEEPDPDLSKE 81
Query: 177 SLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQR 236
+ + + K E + LLSGE D +E+ GAGGTES DWASM+L+MY+ WA +
Sbjct: 82 LVNRIQAFQAKISAYERNILLSGEYDHNDALLEIHPGAGGTESQDWASMLLRMYQRWADQ 141
Query: 237 RGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFA 296
Y+VT +D G+ AGIK T+++ G A+G+ K+E G+HRLVRISPFDS KRRHTSFA
Sbjct: 142 HDYQVTTLDFQNGDEAGIKSVTLEIKGLNAYGFLKSEDGIHRLVRISPFDSNKRRHTSFA 201
Query: 297 AVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNE 356
+V ++P D +T ++I+ESD+ ++ FR+ GAGGQH N T SAVR+ H+PTGI Q +
Sbjct: 202 SVEIMP-VLDQNTEIEIDESDIEMDVFRASGAGGQHINKTSSAVRLTHVPTGIVVASQGQ 260
Query: 357 RSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDL 416
RSQ QN+ +AM +LQ+++ L + A+ E ++I+WG+QIR+YV HPY MVKD
Sbjct: 261 RSQFQNRDTAMKMLQAKLAHLLAEKNAKELDEIRGEKSEIAWGSQIRSYVFHPYNMVKDH 320
Query: 417 RTNYEVSDPDSVLEGDLDGFILSYLSASL 445
RT+YE ++ V++GDLDGFI +YL L
Sbjct: 321 RTDYETANVQGVMDGDLDGFIDAYLKNQL 349
>gi|334143923|ref|YP_004537079.1| hypothetical protein Thicy_0828 [Thioalkalimicrobium cyclicum ALM1]
gi|333964834|gb|AEG31600.1| hypothetical protein Thicy_0828 [Thioalkalimicrobium cyclicum ALM1]
Length = 364
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 150/349 (42%), Positives = 222/349 (63%), Gaps = 2/349 (0%)
Query: 97 QVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELL 156
QV++ L ++ + RL +S EL P +WD+P A + +E L + + L
Sbjct: 18 QVLRGYLDYETKSERLVEVSRELEDPKIWDNPGRAQSLGKEKVQLDNIVGTLDDLIGGLD 77
Query: 157 EHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGG 216
+++++A+ + D + E L +++K E E + SGE+D +CY+E+Q+G+GG
Sbjct: 78 ACKELLEMAQMDQDEAMVGEVENELADLQQKLDELEFQRMFSGEMDANNCYLEIQSGSGG 137
Query: 217 TESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGV 276
TE+ DWASM+L+MY W + +G++ +++ GE+AGIK ATI V G+YA+G+ + E GV
Sbjct: 138 TEAQDWASMLLRMYLRWIESKGFKAEVLEVSDGEVAGIKGATIHVVGDYAYGWMRTETGV 197
Query: 277 HRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTT 336
HRLVR SPFDSG RRHTSFA+V + P D + + IN +DLRI+ +R+ GAGGQH N T
Sbjct: 198 HRLVRKSPFDSGNRRHTSFASVFISPEV-DDNVEIDINPADLRIDVYRASGAGGQHVNKT 256
Query: 337 DSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDI 396
+SAVRI H+PT CQN RSQHQNK A L++++ +LE+ ++ S +DI
Sbjct: 257 ESAVRITHLPTNTVVQCQNGRSQHQNKDEAFKQLRAKLYELEMQKRNSEKQTLEDSKSDI 316
Query: 397 SWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
WG+QIR+YVL R +KDLRT+ E + +VL+GDLD FI + L A L
Sbjct: 317 GWGSQIRSYVLDSGR-IKDLRTSVETGNTTAVLDGDLDQFIEASLKAGL 364
>gi|259046384|ref|ZP_05736785.1| peptide chain release factor 2 [Granulicatella adiacens ATCC 49175]
gi|259036929|gb|EEW38184.1| peptide chain release factor 2 [Granulicatella adiacens ATCC 49175]
Length = 361
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 144/336 (42%), Positives = 214/336 (63%), Gaps = 1/336 (0%)
Query: 118 ELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELES 177
E+++P+ WDD A ++ +++ L E E + ++ +EE D E+ E
Sbjct: 26 EMSEPSFWDDSEKANQVIQKNNELKSIYDTFHKMELAHEETSLLFEMYKEEPDEEVHAEI 85
Query: 178 LEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRR 237
+EA+ ++ + + EL LL+G D S +E+ GAGGTES DW SM+L+MY WA++
Sbjct: 86 VEAIQSLEKDLQRYELSMLLNGPHDKNSAILEIHPGAGGTESQDWGSMLLRMYMRWAEKH 145
Query: 238 GYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAA 297
GYRV +D G+ AGIK T+ ++G A+GY ++E GVHRLVRISPFD+ +RHTSF +
Sbjct: 146 GYRVETVDYQDGDEAGIKSVTLSIEGLNAYGYLRSEKGVHRLVRISPFDAAGKRHTSFCS 205
Query: 298 VAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNER 357
V V+P D ++IN DL+++ +R+ GAGGQH N T SAVRI HIPTGI Q +R
Sbjct: 206 VDVVPQM-DGDIDIEINPDDLKVDVYRASGAGGQHINKTSSAVRITHIPTGIVTQSQAQR 264
Query: 358 SQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLR 417
SQ +N+ AM +L++++ QLE ++A A DI+WG+QIR YV HPY MVKDLR
Sbjct: 265 SQFKNRDQAMAMLKAKLFQLEEEKKAAELAAIRGEQKDIAWGSQIRNYVFHPYSMVKDLR 324
Query: 418 TNYEVSDPDSVLEGDLDGFILSYLSASLDKDEGGQQ 453
+ YE + +V++GDLD F+ +YL +L+ + G++
Sbjct: 325 SGYETGNIGAVMDGDLDSFMDAYLKWTLEGTKAGEE 360
>gi|299066996|emb|CBJ38191.1| peptide chain release factor RF-2; programmed frameshift [Ralstonia
solanacearum CMR15]
Length = 300
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 144/296 (48%), Positives = 210/296 (70%), Gaps = 12/296 (4%)
Query: 151 FEQELLEHIDMIKLAREENDTELELESLEALLT----MRRKSKEKELDALLSGELDPCSC 206
+++L ++ +LAREE D + ++EA+ T MR ++ E + SG +D +C
Sbjct: 8 LDEDLTGGAELFELAREEGDDD----TIEAVETDTAGMRAIVEDMEFRRMFSGPMDAANC 63
Query: 207 YIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYA 266
+I++QAGAGGTE+ DWASM+L+ Y + +R+G++ +++E G++AGIK A++KV+GEYA
Sbjct: 64 FIDIQAGAGGTEACDWASMLLRQYLKYCERKGFKTEVLEESEGDVAGIKSASLKVEGEYA 123
Query: 267 FGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSG 326
FG+ + E GVHRLVR SPFDS RHTSF+++ V P D S +++N +DLR++ +R+
Sbjct: 124 FGFLRTETGVHRLVRKSPFDSAGGRHTSFSSIFVYPEV-DDSIEIEVNPADLRVDTYRAS 182
Query: 327 GAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMN 386
GAGGQH N TDSAVRI HIPTGI CQN+RSQH+N+A AM +L+SR+ + E+ R+ Q
Sbjct: 183 GAGGQHINKTDSAVRITHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHEL-RKRQAE 241
Query: 387 AEHTQ-SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
A+ + S TD+ WG+QIR+YVL R +KDLRTN E+S+ VL+GDLD FI + L
Sbjct: 242 ADKLEASKTDVGWGHQIRSYVLDQSR-IKDLRTNVEISNTQKVLDGDLDAFIEASL 296
>gi|378823460|ref|ZP_09846091.1| peptide chain release factor 2 [Sutterella parvirubra YIT 11816]
gi|378597715|gb|EHY30972.1| peptide chain release factor 2 [Sutterella parvirubra YIT 11816]
Length = 334
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 144/327 (44%), Positives = 217/327 (66%), Gaps = 2/327 (0%)
Query: 115 LSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELE 174
++ E+ P+LW+DP HA IS+E L + + L + ++ +L+ E D +
Sbjct: 1 MNREVENPDLWNDPKHAQEISKEKKLLDDIVGSFQRLTAGLNDAAELFELSMAEEDWDTV 60
Query: 175 LESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWA 234
+ + + R+ E + + +DP +CY+E+QAGAGGTE+ DWASM+ +MY +A
Sbjct: 61 EAVGQDVEAIEREVASLEFKRMFNQPMDPANCYLEIQAGAGGTEAQDWASMLERMYMRYA 120
Query: 235 QRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTS 294
+R+G++VTL +E G++AGIK AT+ ++GE+AFG + E G+HRLVR SPFDS RRHTS
Sbjct: 121 ERKGFKVTLEEESAGDVAGIKSATLYIEGEWAFGTLRTETGIHRLVRKSPFDSNARRHTS 180
Query: 295 FAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQ 354
F +V V P D S ++IN +DL+++ FR+ GAGGQH T+SAVRI H+PTGI CQ
Sbjct: 181 FTSVYVYPEV-DDSIEIEINPADLKVDVFRASGAGGQHIQKTESAVRIHHVPTGIITICQ 239
Query: 355 NERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVK 414
++RSQH+N+ AM L++++ +LE+ ++ + + +S +DI WG+QIR+YVL R VK
Sbjct: 240 DDRSQHRNREKAMQQLKAKLYELEMRKRMEAQNKLEESKSDIGWGHQIRSYVLDQSR-VK 298
Query: 415 DLRTNYEVSDPDSVLEGDLDGFILSYL 441
DLRTN E + +VL+GDLD FI + L
Sbjct: 299 DLRTNVETGNTGAVLDGDLDQFIEASL 325
>gi|117617639|ref|YP_857857.1| peptide chain release factor 2 [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|166223621|sp|A0KNK6.1|RF2_AERHH RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|117559046|gb|ABK35994.1| peptide chain release factor 2 (programmed frameshift) [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
Length = 365
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 150/354 (42%), Positives = 223/354 (62%), Gaps = 2/354 (0%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
+++ ++++ L + RL ++AEL +P++W++P A + +E +L + +
Sbjct: 14 LSERTELLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERVALENVVGTIDTL 73
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
Q + +++LA E D + E++ + K + E + SG+ DP CYI++Q
Sbjct: 74 TQGADDVAMLVELAVEGEDEDTFNEAVAEADVLETKLVDLEFRRMFSGQHDPSDCYIDIQ 133
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
+G+GGTE+ DWA+MVL+MY W GY+ L++ G++AGIK ATIK GEYAFG+ +
Sbjct: 134 SGSGGTEAQDWANMVLRMYLRWGDAHGYKPELIECSEGDVAGIKSATIKFTGEYAFGWLR 193
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
E GVHRLVR SPFDSG RRHTSF +V V P ++IN +DLRI+ +R+ GAGGQ
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFCSVFVYPEID-DDIDIEINPADLRIDVYRASGAGGQ 252
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQ 391
H N T+SAVRI HIPTG+ CQN+RSQH+NK M L++++ +LEI +Q +
Sbjct: 253 HVNRTESAVRITHIPTGVVVQCQNDRSQHKNKDQCMKQLKAKLYELEIQKQNAEKQALEE 312
Query: 392 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ +DI WG+QIR+YVL R +KDLRT E + +VL+GDLD FI + L + L
Sbjct: 313 TKSDIGWGSQIRSYVLDDAR-IKDLRTGVETRNTQAVLDGDLDKFIEASLKSGL 365
>gi|299472049|emb|CBN80132.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 466
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 155/362 (42%), Positives = 230/362 (63%), Gaps = 9/362 (2%)
Query: 98 VIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLE 157
++ RL L RL L A ++ P L+DD AG+I +E + K++ VK+ EL
Sbjct: 106 LLSSRLDIPALEARLAELDALVSDPKLYDDSTKAGKIVKERAKVESKLENVKSLNSELQS 165
Query: 158 HIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLS--GELDPCSCYIEVQAGAG 215
+M ++A E + +L E +E + +R++++ + LLS GEL +CY+E+QAGAG
Sbjct: 166 WREMYEMASLEEEGDLLTECIEKVGALRKQAERARAETLLSLGGELSASNCYLELQAGAG 225
Query: 216 GTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVG 275
GTES DW SM+ +MY WA+ + + + ++ PG+ AG++ + V+GE A+G+ ++E G
Sbjct: 226 GTESHDWTSMLYKMYTRWAETKAFTLQPLNSSPGDEAGLRSVMVFVEGESAYGWLRSEAG 285
Query: 276 VHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSS---THVQINESDLRIERFRSGGAGGQH 332
VHRLVR SP+D RRHTSF+ V V P +G S V+I DL+++ R+ GAGGQH
Sbjct: 286 VHRLVRNSPYDPNGRRHTSFSQVRVFPEAGGESGDAAKVEIPAKDLKVDTMRAQGAGGQH 345
Query: 333 ANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQL-EIARQAQMNAEHTQ 391
NTTDSAVR+ H+PTG+ A Q++RSQH+N+ +AM L++++ Q E R A+ N E+
Sbjct: 346 VNTTDSAVRLTHLPTGLVALSQSDRSQHKNRENAMRALRAKIFQRKEEERHAKRN-EYAA 404
Query: 392 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKDEGG 451
L D ++GNQIR+YVL PY+MVKD RT + D VL+G LDGFI + L A K GG
Sbjct: 405 GLGDNAFGNQIRSYVLSPYQMVKDHRTGKQEGDVSGVLDGGLDGFIDAALIAEHSK--GG 462
Query: 452 QQ 453
++
Sbjct: 463 EE 464
>gi|443645036|ref|ZP_21128886.1| Peptide chain release factor 2 [Pseudomonas syringae pv. syringae
B64]
gi|443285053|gb|ELS44058.1| Peptide chain release factor 2 [Pseudomonas syringae pv. syringae
B64]
Length = 304
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 143/292 (48%), Positives = 206/292 (70%), Gaps = 4/292 (1%)
Query: 155 LLEHIDMIKLAREENDTELELESLEALLTMRRKSKEK-ELDALLSGELDPCSCYIEVQAG 213
L + D++ ++ EE D + ++ + A + R+S EK E + SG++DP + Y+++QAG
Sbjct: 16 LTDAKDLLLMSAEEED-QAAVDDVAAEVERLRESLEKLEFRRMFSGDMDPNNAYLDIQAG 74
Query: 214 AGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAE 273
+GGTE+ DWA+++L+MY WA +RG+ T+M+ GE+AGIK AT+ + GEYAFG+ + E
Sbjct: 75 SGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTE 134
Query: 274 VGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHA 333
+GVHRLVR SPFDSG RRHTSF+AV V P D + + IN +DLRI+ +RS GAGGQH
Sbjct: 135 IGVHRLVRKSPFDSGNRRHTSFSAVFVSPEI-DDNIEIDINPADLRIDTYRSSGAGGQHV 193
Query: 334 NTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSL 393
NTTDSAVRI H+PT +CQNERSQH NK +AM +L++R+ + E+ ++ + +
Sbjct: 194 NTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDTK 253
Query: 394 TDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+DI WG+QIR+YVL R +KDLRTN E SD D VL+GD+D ++++ L L
Sbjct: 254 SDIGWGHQIRSYVLDASR-IKDLRTNIERSDCDKVLDGDIDEYLIASLKQGL 304
>gi|294790676|ref|ZP_06755834.1| peptide chain release factor 2 [Scardovia inopinata F0304]
gi|294458573|gb|EFG26926.1| peptide chain release factor 2 [Scardovia inopinata F0304]
Length = 370
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 153/344 (44%), Positives = 214/344 (62%), Gaps = 6/344 (1%)
Query: 96 IQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQEL 155
+ I L +NL ++ L E + P LWDD +A ++ + K + E+ L
Sbjct: 17 FETISSALGRQNLAEKIVSLEKEASAPGLWDDQENAQLVTSRLSQTQNEAKRLDDLERRL 76
Query: 156 LEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAG 215
+ + +L EE+D + + E+ + L +R + E+ LL GE D + + +++GAG
Sbjct: 77 DDIATLYELGSEEDDQDSKAEAEKELTAVRSDLSDLEIQTLLDGEYDNRAAVVTIRSGAG 136
Query: 216 GTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVG 275
G ++ DWA M+++MY WA+R Y+V +MD E AGIK AT +VD YA+G E G
Sbjct: 137 GVDAADWAQMLMRMYLRWAERHHYKVQIMDTSYAEEAGIKSATFEVDAPYAYGKLSVEGG 196
Query: 276 VHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANT 335
HRLVRISPFD+ RR TSFAAV VIP + + H+ I +SD+R++ + S G GGQ NT
Sbjct: 197 THRLVRISPFDNNSRRQTSFAAVEVIPLV-EPTDHIDIPDSDIRVDTYMSHGPGGQGVNT 255
Query: 336 TDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTD 395
T SAVRI HIPTGI T Q+ERSQ QN+A+AM VLQSR L + +Q + A+ + D
Sbjct: 256 TYSAVRITHIPTGIVVTMQDERSQIQNRAAAMSVLQSR---LLVMKQEEEAAKKKELAGD 312
Query: 396 I--SWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
+ SWG+Q+R+YVLHPY+MVKDLRT YE SDP V +GD+D FI
Sbjct: 313 VKASWGDQMRSYVLHPYQMVKDLRTGYETSDPQKVFDGDIDAFI 356
>gi|294501808|ref|YP_003565508.1| peptide chain release factor 2 [Bacillus megaterium QM B1551]
gi|384044357|ref|YP_005492374.1| protein chain release factor B-like protein [Bacillus megaterium
WSH-002]
gi|294351745|gb|ADE72074.1| peptide chain release factor 2 [Bacillus megaterium QM B1551]
gi|345442048|gb|AEN87065.1| Protein chain release factor B-like protein [Bacillus megaterium
WSH-002]
Length = 326
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 147/325 (45%), Positives = 207/325 (63%), Gaps = 3/325 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDM-IKLAREENDTELELESLEA 180
PN W+D A + E L + + + E E++ + +L +EE D +L E +
Sbjct: 4 PNFWNDQQAAQTVINEANGLKDAVNQFNHLD-ETYENLQVSYELVKEEYDEDLAEELVSE 62
Query: 181 LLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYR 240
L + + EL LLS D + +E+ GAGGTES DW SM+L+MY WA+++G++
Sbjct: 63 LKELISGMNDFELQLLLSEPYDKNNAILELHPGAGGTESQDWGSMLLRMYTRWAEKKGFK 122
Query: 241 VTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAV 300
V +D +PG+ AGIK T+ + G A+GY KAE GVHRLVRISPFDS RRHTSF + +
Sbjct: 123 VETLDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCDI 182
Query: 301 IPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQH 360
+P D + + I DL+++ +R+ GAGGQH NTTDSAVRI H+PT + +CQ ERSQ
Sbjct: 183 MPEFNDEIS-IDIRTEDLKVDTYRASGAGGQHINTTDSAVRITHLPTNVVVSCQTERSQI 241
Query: 361 QNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNY 420
+N+ AM +L+S++ QLEI +Q + AE DI WG+QIR+YV HPY +VKD RTN
Sbjct: 242 KNREQAMKMLKSKLYQLEIEKQQEQLAEIRGEQKDIGWGSQIRSYVFHPYSLVKDHRTNT 301
Query: 421 EVSDPDSVLEGDLDGFILSYLSASL 445
EV + SV++GDLD FI +YL + +
Sbjct: 302 EVGNTQSVMDGDLDPFIDAYLRSHI 326
>gi|312126885|ref|YP_003991759.1| hypothetical protein Calhy_0649 [Caldicellulosiruptor
hydrothermalis 108]
gi|311776904|gb|ADQ06390.1| hypothetical protein Calhy_0649 [Caldicellulosiruptor
hydrothermalis 108]
Length = 370
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 149/342 (43%), Positives = 226/342 (66%), Gaps = 1/342 (0%)
Query: 108 LNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLARE 167
L L L +E ++P+ W D ++ ++ ++ L K++ + + + + +L+ E
Sbjct: 28 LESELKSLESETSRPDFWQDLENSQKVLQKIKRLKDKIERFQKLYSQWEDLKVLTELSLE 87
Query: 168 ENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVL 227
E + E+ E + LL + RK ++ +++ LL+G D + + + AGAGGTE+ DWA M+L
Sbjct: 88 EGNHEMAEELEKELLDLERKIEDFKIEVLLNGPYDKNNAILSIHAGAGGTEAQDWAEMLL 147
Query: 228 QMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDS 287
+MY WA ++GY+V +D +PGE AGIK T+++ GE A+GY KAE GVHRLVRISPFD+
Sbjct: 148 RMYTRWAAKKGYKVETLDILPGEEAGIKNVTVRIVGENAYGYLKAEKGVHRLVRISPFDA 207
Query: 288 GKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPT 347
RRHTSFAAV V+P D T ++I E DL I+ FR+ GAGGQH N T+SAVRI HIPT
Sbjct: 208 AGRRHTSFAAVEVLPEVED-DTDIEIKEEDLEIDTFRASGAGGQHVNKTESAVRIKHIPT 266
Query: 348 GITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVL 407
GI TCQNERSQH+N+ A+ +L++++ +L+ + + + T+I WGNQIR+YV
Sbjct: 267 GIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQTEIGWGNQIRSYVF 326
Query: 408 HPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKDE 449
PY +VKD RT EV + ++V++G++D FI +YL +++E
Sbjct: 327 CPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYLKKFRNEEE 368
>gi|406944423|gb|EKD76199.1| hypothetical protein ACD_43C00196G0003 [uncultured bacterium]
Length = 372
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 145/357 (40%), Positives = 221/357 (61%), Gaps = 1/357 (0%)
Query: 89 AAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEV 148
A + Q I +I ++L + + + L E+ +P+ W++ HA +S+E L ++
Sbjct: 8 AKDLRQRINIIGQQLNVSGMQAKQHALETEMAEPDFWNNTKHAQTVSKEVNDLREEISTW 67
Query: 149 KAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYI 208
+ EL I++ +L R D + ++ + + +K E E L +G+ D +
Sbjct: 68 ENLRHELDSIIELAQLNRTAGDAGMAIDLEQQFAAVNQKFSELEFHLLFNGQYDASPAVV 127
Query: 209 EVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFG 268
+ AGAGG ++ DWA ++++M + ++ ++VT++D G AGIK + V G YA+G
Sbjct: 128 AIHAGAGGVDAQDWAEILMRMVMRFCEQHHFQVTVLDISRGSEAGIKSVVMDVVGRYAYG 187
Query: 269 YAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGA 328
Y K+E GVHRLVR SPF++ R TSFA + V+P G+ + V I + DLRI+ FRSGG
Sbjct: 188 YLKSEHGVHRLVRQSPFNADALRQTSFALIEVLPELGELNP-VVIKDEDLRIDVFRSGGH 246
Query: 329 GGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAE 388
GGQ NTTDSAVRI H+PT I CQNERSQHQNK AM +L++++++L++ + +
Sbjct: 247 GGQSVNTTDSAVRITHLPTNIVVQCQNERSQHQNKIIAMKILRAKLHKLQLEAEQAEKLK 306
Query: 389 HTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
T WGNQIR+YVLHPY+MVKD RT++EVSDP +VL+G LDGFI +YL +++
Sbjct: 307 LRGEFTSAEWGNQIRSYVLHPYKMVKDHRTDFEVSDPQAVLDGKLDGFIEAYLRSTV 363
>gi|374261271|ref|ZP_09619855.1| peptide chain release factor 2 [Legionella drancourtii LLAP12]
gi|363538166|gb|EHL31576.1| peptide chain release factor 2 [Legionella drancourtii LLAP12]
Length = 335
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 149/328 (45%), Positives = 212/328 (64%), Gaps = 2/328 (0%)
Query: 118 ELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELES 177
EL +W++P A + RE L + + Q +++ ++ +LAREEND + E
Sbjct: 7 ELESSTVWNNPEVAQALGRERTQLENVVFTLSGLSQSIIDLTELFELAREENDEQAINEI 66
Query: 178 LEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRR 237
L T+ +K + E + SG +D C+ Y+++Q+G+GGTE+ DWA M+L+MY W ++
Sbjct: 67 GAELETIEQKVADLEFRRMFSGRMDGCNAYLDIQSGSGGTEAQDWAEMLLRMYLRWGEQH 126
Query: 238 GYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAA 297
G+ L++ PG++AGIK ATI GEYAFG+ + E GVHRLVR SPFDSG RRHTSFAA
Sbjct: 127 GFTTELIECSPGDVAGIKSATIYFQGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFAA 186
Query: 298 VAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNER 357
V + P D ++IN +DLRI+ +R+ GAGGQH N TDSAVRI H P+GI CQN+R
Sbjct: 187 VFISPEI-DDDIEIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHAPSGIVVQCQNDR 245
Query: 358 SQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLR 417
SQH+NK AM L++++ +LE+ ++ S +DI WG+QIR+YVL R +KDLR
Sbjct: 246 SQHRNKDQAMKQLRAKLYELEMQKKNAEQQALEASKSDIGWGSQIRSYVLDQSR-IKDLR 304
Query: 418 TNYEVSDPDSVLEGDLDGFILSYLSASL 445
T E S+ +VL+G LD FI + L A +
Sbjct: 305 TGVETSNTQAVLDGALDQFIEASLKAGV 332
>gi|440720380|ref|ZP_20900798.1| peptide chain release factor 2 [Pseudomonas syringae BRIP34876]
gi|440726508|ref|ZP_20906761.1| peptide chain release factor 2 [Pseudomonas syringae BRIP34881]
gi|440365905|gb|ELQ02992.1| peptide chain release factor 2 [Pseudomonas syringae BRIP34876]
gi|440366090|gb|ELQ03175.1| peptide chain release factor 2 [Pseudomonas syringae BRIP34881]
Length = 293
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 143/292 (48%), Positives = 206/292 (70%), Gaps = 4/292 (1%)
Query: 155 LLEHIDMIKLAREENDTELELESLEALLTMRRKSKEK-ELDALLSGELDPCSCYIEVQAG 213
L + D++ ++ EE D + ++ + A + R+S EK E + SG++DP + Y+++QAG
Sbjct: 5 LTDAKDLLLMSAEEED-QAAVDDVAAEVERLRESLEKLEFRRMFSGDMDPNNAYLDIQAG 63
Query: 214 AGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAE 273
+GGTE+ DWA+++L+MY WA +RG+ T+M+ GE+AGIK AT+ + GEYAFG+ + E
Sbjct: 64 SGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTE 123
Query: 274 VGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHA 333
+GVHRLVR SPFDSG RRHTSF+AV V P D + + IN +DLRI+ +RS GAGGQH
Sbjct: 124 IGVHRLVRKSPFDSGNRRHTSFSAVFVSPEI-DDNIEIDINPADLRIDTYRSSGAGGQHV 182
Query: 334 NTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSL 393
NTTDSAVRI H+PT +CQNERSQH NK +AM +L++R+ + E+ ++ + +
Sbjct: 183 NTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDTK 242
Query: 394 TDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+DI WG+QIR+YVL R +KDLRTN E SD D VL+GD+D ++++ L L
Sbjct: 243 SDIGWGHQIRSYVLDASR-IKDLRTNIERSDCDKVLDGDIDEYLIASLKQGL 293
>gi|388543658|ref|ZP_10146948.1| peptide chain release factor 2 [Pseudomonas sp. M47T1]
gi|388278215|gb|EIK97787.1| peptide chain release factor 2 [Pseudomonas sp. M47T1]
Length = 293
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 141/286 (49%), Positives = 199/286 (69%), Gaps = 2/286 (0%)
Query: 160 DMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTES 219
D++ +A EE D + E + +R ++ E + SGE+D + Y+++QAG+GGTE+
Sbjct: 10 DLLLMAAEEEDEGAVADVTEEVDRLRESLEKLEFRRMFSGEMDANNAYLDIQAGSGGTEA 69
Query: 220 MDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRL 279
DWA+++L+MY WA +RG+ T+M+ GE+AGIK AT+ + GEYAFG+ + E+GVHRL
Sbjct: 70 QDWANILLRMYLRWADKRGFDTTIMELSAGEVAGIKGATLHIKGEYAFGWLRTEIGVHRL 129
Query: 280 VRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSA 339
VR SPFDSG RRHTSF+AV V P D + + IN +DLRI+ +RS GAGGQH NTTDSA
Sbjct: 130 VRKSPFDSGNRRHTSFSAVFVSPEI-DDNIEIDINPADLRIDTYRSSGAGGQHVNTTDSA 188
Query: 340 VRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWG 399
VRI H+PT +CQNERSQH NK +AM +L++R+ + E+ ++ + S +DI WG
Sbjct: 189 VRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQAMEDSKSDIGWG 248
Query: 400 NQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+QIR+YVL R +KDLRTN E SD D VL+GD+D ++++ L L
Sbjct: 249 HQIRSYVLDASR-IKDLRTNIERSDCDKVLDGDIDEYLVASLKQGL 293
>gi|402299802|ref|ZP_10819375.1| peptide chain release factor 2 [Bacillus alcalophilus ATCC 27647]
gi|401725048|gb|EJS98362.1| peptide chain release factor 2 [Bacillus alcalophilus ATCC 27647]
Length = 328
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 144/327 (44%), Positives = 208/327 (63%), Gaps = 1/327 (0%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
+ P+ W++ A + E +L ++ E E + +L +EE+D +L E
Sbjct: 1 MTDPDFWNNQERAQTVINESNALKEQVNTFLKLEGEYEDLEVSYELVKEEDDEDLAAELF 60
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
+ ++ + EL LLS D + +E+ GAGGTES DWASM+L+MY WA +G
Sbjct: 61 TGVKSLTEQMNAFELQLLLSEPYDKNNAILELHPGAGGTESQDWASMLLRMYNRWADSKG 120
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
++V MD +PG+ AG+K T+ + G A+GY KAE GVHRLVRISPFDS RRHTSF +
Sbjct: 121 FKVETMDYLPGDEAGVKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSC 180
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
V+P D + ++IN DL+I+ +R+ GAGGQH NTTDSAVRI H+PT TCQ+ERS
Sbjct: 181 EVMPEL-DDTVEIEINTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTNTVVTCQSERS 239
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
Q +N+ AM ++++++ QL I Q + E +I WG+QIR+YV HPY +VKD RT
Sbjct: 240 QIKNRDQAMKMMKAKLYQLRIEEQQRELDEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRT 299
Query: 419 NYEVSDPDSVLEGDLDGFILSYLSASL 445
N+E + ++V++G+LDGFI +YL +SL
Sbjct: 300 NHESGNTNAVMDGELDGFIDAYLRSSL 326
>gi|424066504|ref|ZP_17803968.1| hypothetical protein Pav013_1293 [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
gi|424071158|ref|ZP_17808584.1| hypothetical protein Pav037_1270 [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
gi|407999469|gb|EKG39853.1| hypothetical protein Pav037_1270 [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
gi|408002237|gb|EKG42499.1| hypothetical protein Pav013_1293 [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
Length = 293
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 143/292 (48%), Positives = 206/292 (70%), Gaps = 4/292 (1%)
Query: 155 LLEHIDMIKLAREENDTELELESLEALLTMRRKSKEK-ELDALLSGELDPCSCYIEVQAG 213
L + D++ ++ EE D + ++ + A + R+S EK E + SG++DP + Y+++QAG
Sbjct: 5 LADAKDLLLMSAEEED-QAAVDDVAAEVERLRESLEKLEFRRMFSGDMDPNNAYLDIQAG 63
Query: 214 AGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAE 273
+GGTE+ DWA+++L+MY WA +RG+ T+M+ GE+AGIK AT+ + GEYAFG+ + E
Sbjct: 64 SGGTEAQDWANILLRMYLRWADKRGFDATIMELSAGEVAGIKGATVHIKGEYAFGWLRTE 123
Query: 274 VGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHA 333
+GVHRLVR SPFDSG RRHTSF+AV V P D + + IN +DLRI+ +RS GAGGQH
Sbjct: 124 IGVHRLVRKSPFDSGNRRHTSFSAVFVSPEI-DDNIEIDINPADLRIDTYRSSGAGGQHV 182
Query: 334 NTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSL 393
NTTDSAVRI H+PT +CQNERSQH NK +AM +L++R+ + E+ ++ + +
Sbjct: 183 NTTDSAVRITHVPTNTVVSCQNERSQHANKDTAMKMLRARLYEQEVQKRNAASQALEDTK 242
Query: 394 TDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+DI WG+QIR+YVL R +KDLRTN E SD D VL+GD+D ++++ L L
Sbjct: 243 SDIGWGHQIRSYVLDASR-IKDLRTNIERSDCDKVLDGDIDEYLIASLKQGL 293
>gi|308048394|ref|YP_003911960.1| peptide chain release factor 2 (bRF-2) [Ferrimonas balearica DSM
9799]
gi|307630584|gb|ADN74886.1| bacterial peptide chain release factor 2 (bRF-2) [Ferrimonas
balearica DSM 9799]
Length = 365
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 149/360 (41%), Positives = 229/360 (63%), Gaps = 14/360 (3%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
+++ ++++ L + RL ++AEL +P++W++P A + RE +L +K +
Sbjct: 14 LSERTELLRGYLDYDAKQERLEEVNAELEQPDVWNEPERAQELGRERSNLEAVVKTINDL 73
Query: 152 EQELLEHIDMIKLA------REENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
+Q L + +++ LA + + ELE LEA L ++ E + SG D
Sbjct: 74 DQGLEDVRELLDLAVEEQDEESFEEAKAELEGLEAQL------EKLEFRRMFSGAQDAND 127
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
Y+++QAG+GGTE+ DW +++L+MY WA+ +G++ +++ GE+AG+K AT+K+ GEY
Sbjct: 128 AYLDLQAGSGGTEAQDWCNILLRMYLRWAEAKGFKAEIIEVSEGEVAGLKSATVKISGEY 187
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
AFG+ + E GVHRLVR SPFDSG RRHTSF++ V P D + ++IN +DLRI+ +R+
Sbjct: 188 AFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEV-DDNIDIEINPADLRIDVYRA 246
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQM 385
GAGGQH NTT+SAVRI H+PT CQNERSQH+NK AM L++++ +LE+ +Q
Sbjct: 247 SGAGGQHVNTTESAVRITHMPTNTVVQCQNERSQHKNKDQAMKQLKAKLFELEMQKQNAE 306
Query: 386 NAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ +DI WG+QIR+YVL R +KDLRT E + +VL+GDLD FI + L + L
Sbjct: 307 KQAAEDAKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDRFIEASLKSGL 365
>gi|302385044|ref|YP_003820866.1| hypothetical protein Closa_0615 [Clostridium saccharolyticum WM1]
gi|302195672|gb|ADL03243.1| hypothetical protein Closa_0615 [Clostridium saccharolyticum WM1]
Length = 377
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 146/357 (40%), Positives = 220/357 (61%), Gaps = 1/357 (0%)
Query: 85 WKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGK 144
+K + + + ++ L N R++ L + +P W+DP + +I + +L
Sbjct: 7 YKYELSTFEKPLVEVRDSLDLDNKLKRIDELDKSMEEPGFWEDPEKSAKIVQLAKNLKDT 66
Query: 145 MKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPC 204
++ + E++ + MI++ EEND L E E L + + ++ LLSGE D
Sbjct: 67 VQSYQELERQYEDIGVMIEMGNEENDPSLVPEVEEMLREFKESLESMRINTLLSGEYDSD 126
Query: 205 SCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGE 264
+ + + AGAGGTES DW M+ +M+ WA+++G+ + ++D + GE AGIK T++++G
Sbjct: 127 NAILRLNAGAGGTESCDWCGMLYRMFCRWAEKKGFSLEVLDYLDGEEAGIKSVTVQINGP 186
Query: 265 YAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFR 324
A+GY K+E GVHRLVRISPF++ +R TSF + V+P+ + V+INE DLRI+ +R
Sbjct: 187 NAYGYLKSEKGVHRLVRISPFNAAGKRQTSFVSCDVMPDI-EEDLDVEINEEDLRIDTYR 245
Query: 325 SGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQ 384
S GAGGQH N T SA+RI H+PTGI CQNERSQ QNK AM +L++++ L+ A+
Sbjct: 246 SSGAGGQHINKTSSAIRITHLPTGIVVQCQNERSQFQNKDKAMQMLKAKLYMLKQQENAE 305
Query: 385 MNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
+ +T+I WGNQIR+YVL PY MVKD RTN E + SVL+G LD F+ +YL
Sbjct: 306 KLSGIRGDVTEIGWGNQIRSYVLQPYTMVKDHRTNAETGNVGSVLDGSLDQFMYAYL 362
>gi|160898706|ref|YP_001564288.1| peptide chain release factor 2 [Delftia acidovorans SPH-1]
gi|160364290|gb|ABX35903.1| peptide chain release factor 2 [Delftia acidovorans SPH-1]
Length = 386
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 148/341 (43%), Positives = 218/341 (63%), Gaps = 14/341 (4%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++A L P++W+DP A + +E L G + ++ EL ++ ++ ++++EE D
Sbjct: 54 RLRTVNASLEDPSVWNDPKKAQELGKEKKLLDGVVLTLQKLTTELADNAELFEMSKEEGD 113
Query: 171 ------TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWAS 224
E E L+ L+ +E E + E DP +C++++QAGAGGTE+ DWA
Sbjct: 114 ETGLLTIEGETAKLQPLI------EELEFRRMFGKEADPLNCFVDIQAGAGGTEACDWAG 167
Query: 225 MVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISP 284
M+L+ Y +A+R+G++ T+ +E PG+IAGIK ATI ++GEYA+G + E GVHRLVR SP
Sbjct: 168 MLLRQYLKYAERKGFKATVEEETPGDIAGIKSATIHIEGEYAYGLLRTETGVHRLVRKSP 227
Query: 285 FDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIH 344
FDS RHTSFA++ V P D S ++IN SD+R + +R+ GAGGQH N TDSAVR+ H
Sbjct: 228 FDSSGGRHTSFASLFVYPEI-DDSIQIEINPSDVRTDTYRASGAGGQHINKTDSAVRLTH 286
Query: 345 IPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRT 404
+PTGI CQ+ RSQH N+ A L+S++ + E+ ++ + + TD+ WG+QIR+
Sbjct: 287 MPTGIVVQCQDGRSQHSNRDVAWQRLRSKLYEHEMQKRMVEQQKLEDTKTDVGWGHQIRS 346
Query: 405 YVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
YVL R +KDLRTN E+S VL+GDLD FI + L L
Sbjct: 347 YVLDNSR-IKDLRTNVEISATQKVLDGDLDAFIEASLKQGL 386
>gi|284023776|ref|ZP_06378174.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
132]
Length = 331
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 143/330 (43%), Positives = 211/330 (63%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
+ +PN WD+ A I ++ +L + K + E+ + L +EE D E++ +
Sbjct: 2 MAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEDLE 61
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
+ ++ + K E EL LL G D + +E+ GAGGTES DWA+M+ +MY+ + +++G
Sbjct: 62 QEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKG 121
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
++V +D +PG+ AGIK T+ + G A+GY KAE GVHRLVRISPFDS RRHTSFA+
Sbjct: 122 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASC 181
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
VIP+ + ++IN D+ ++ FR+ GAGGQH N T+SA+RI H P+GI QNERS
Sbjct: 182 DVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERS 241
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
Q +N+ +AM +L+S++ QL++ QA+ AE +I WG+QIR+YV HPY MVKD RT
Sbjct: 242 QIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRT 301
Query: 419 NYEVSDPDSVLEGDLDGFILSYLSASLDKD 448
N E D+V++GD+ FI SYL ++ D
Sbjct: 302 NEETGKVDAVMDGDIRPFIESYLRQTMSHD 331
>gi|78047471|ref|YP_363646.1| peptide chain release factor 2 [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|123585257|sp|Q3BUB7.1|RF2_XANC5 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|78035901|emb|CAJ23592.1| peptide chain release factor 2 [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 374
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 153/337 (45%), Positives = 216/337 (64%), Gaps = 6/337 (1%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL +S EL P++W+D A + RE L + + L + D+++LA E D
Sbjct: 33 RLEEVSRELESPDVWNDAERAQALGRERSMLEKTVIGIADVLSGLADAGDLLELAESEQD 92
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
+ L + L + ++ E + SG++D + ++++QAGAGGTE+ DWA ++L+MY
Sbjct: 93 EDTALAVIADLDNYQAHVEKLEFQRMFSGQMDSANAFVDIQAGAGGTEAQDWAEILLRMY 152
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA+ RG++ LM+ GE+AGIK AT++++GEYA+G+ K E+GVHRLVR SPFDS R
Sbjct: 153 LRWAESRGWKTELMEVSGGEVAGIKSATVRIEGEYAYGWLKTEIGVHRLVRKSPFDSDNR 212
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSF +V V P D + + IN +DLR + +RS GAGGQH N T+SAVRI HIPT
Sbjct: 213 RHTSFTSVFVSPEV-DDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNTV 271
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEI-ARQAQMNA-EHTQSLTDISWGNQIRTYVLH 408
CQ RSQHQN+ +AM +L +++ +LE+ R A+ +A E T+S DI WG+QIR YVL
Sbjct: 272 VACQTGRSQHQNRDNAMKMLAAKLYELEVQKRNAEKDALEATKS--DIGWGSQIRNYVLD 329
Query: 409 PYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E SD VL+GDLD F+ + L A L
Sbjct: 330 QSR-IKDLRTGIERSDTQKVLDGDLDEFVEASLKAGL 365
>gi|229821252|ref|YP_002882778.1| peptide chain release factor 2 [Beutenbergia cavernae DSM 12333]
gi|259585260|sp|C5BYB6.1|RF2_BEUC1 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|229567165|gb|ACQ81016.1| peptide chain release factor 2 [Beutenbergia cavernae DSM 12333]
Length = 374
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 221/356 (62%), Gaps = 6/356 (1%)
Query: 84 DWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
D+ + +A+ +++ I L R+ LS P+LWDDP A +++
Sbjct: 4 DFPAEISALRGTLEQITAVTDPDALRARIAELSEAAAAPDLWDDPDAAQKVTSRLSHTQS 63
Query: 144 KMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDP 203
+++ + + + +++LA EE+D + E+ L +R E E+ LL+GE D
Sbjct: 64 ELERLDTLRSRIDDLETLVQLAAEEDDADTLAEAEAELTKIRTSMGELEVRTLLAGEYDS 123
Query: 204 CSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDG 263
+ +++GAGG ++ D+A M+L+MY WA+R+GY ++D E AG+K AT +V
Sbjct: 124 REAVVTIRSGAGGVDAADFAEMLLRMYLRWAERKGYPTQVLDTSYAEEAGLKSATFEVKV 183
Query: 264 EYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERF 323
YAFG E G HRLVRISPFD+ RR TSFAAV VIP + + H+ I E+D+RI+ F
Sbjct: 184 PYAFGTLSVEAGTHRLVRISPFDNQGRRQTSFAAVEVIPLI-EQTDHIDIPETDIRIDVF 242
Query: 324 RSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQA 383
RS G GGQ NTTDSAVRI H+PTGI + QNE+SQ QN+A+AM VLQSR L +A Q
Sbjct: 243 RSSGPGGQSVNTTDSAVRITHLPTGIVVSMQNEKSQIQNRAAAMRVLQSR---LLLAMQE 299
Query: 384 QMNAEHTQSLTDI--SWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
+ NA+ + D+ SWG+Q+R+YVL PY+MVKDLRT +EV +P +V +GD+D FI
Sbjct: 300 EENAKKKELAGDVKASWGDQMRSYVLQPYQMVKDLRTEHEVGNPSAVFDGDIDDFI 355
>gi|328948955|ref|YP_004366292.1| hypothetical protein Tresu_2126 [Treponema succinifaciens DSM 2489]
gi|328449279|gb|AEB14995.1| hypothetical protein Tresu_2126 [Treponema succinifaciens DSM 2489]
Length = 381
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 151/364 (41%), Positives = 218/364 (59%), Gaps = 10/364 (2%)
Query: 84 DWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
D++ A + + + RL ++N ++ A P WDD A +I + L G
Sbjct: 8 DFQEPIAQLKADVSAVWGRLDVDDINKKIAEKEALTTAPGFWDDNAKATKIMNDIKLLKG 67
Query: 144 KMKEVKAFEQELLEHID----MIKLAREENDTELELESLEALLTMRRKSKEKELDALLSG 199
+++ Q+L++ +D + +L EEND +E E E + + + + LLS
Sbjct: 68 RIEPW----QDLVQRVDDLEALYELGLEENDKSIESELKEQYEKAKADYEHQSILNLLSD 123
Query: 200 ELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATI 259
E+D C++ V AGAGGTE+ DW M+ +MY+ WA+R GY+V ++ + E G+K +
Sbjct: 124 EVDKNDCFLSVHAGAGGTEACDWTFMLSRMYQRWAERHGYKVEVLSQEEAE-GGLKSINM 182
Query: 260 KVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLR 319
K+ G Y +GY K E GVHRLVRISPFD+ RRHTSFA+V V P D S V I+ DLR
Sbjct: 183 KISGPYVYGYTKGEAGVHRLVRISPFDANARRHTSFASVYVFP-VLDDSIEVNIDPKDLR 241
Query: 320 IERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI 379
++ +RSGG GGQH N T+SAVR HIPTGI C +ERSQ N+ASAM +L+SR+ +
Sbjct: 242 VDTYRSGGKGGQHVNKTESAVRFTHIPTGIVVACDSERSQLMNRASAMSILKSRLYEYYK 301
Query: 380 ARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILS 439
+ + N++ DIS+G+QIR+YV PY MVKD RT Y V + V++GD+DGF+
Sbjct: 302 EEREKENSKFAGEKKDISFGSQIRSYVFQPYTMVKDHRTKYSVGNIQGVMDGDIDGFLDE 361
Query: 440 YLSA 443
+LSA
Sbjct: 362 FLSA 365
>gi|67461212|sp|Q927Y4.2|RF2_LISIN RecName: Full=Peptide chain release factor 2; Short=RF-2
Length = 366
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 150/353 (42%), Positives = 219/353 (62%), Gaps = 1/353 (0%)
Query: 93 AQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFE 152
AQ I+ + L ++ VR+ L ++ PN W+D A ++ E + A E
Sbjct: 14 AQQIKDFRGSLDLDSMEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALE 73
Query: 153 QELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQA 212
+E ++L +EE D +L+ E + + E EL +LS D + +E+
Sbjct: 74 EEQESMEISLELLKEEADEDLQAELEKDIKAYVATISEFELKLMLSDPYDKNNAILELHP 133
Query: 213 GAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKA 272
GAGGTES DW SM+L+MY+ W++++G++V ++D G+ AGIK T+ + G A+GY KA
Sbjct: 134 GAGGTESQDWGSMLLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKA 193
Query: 273 EVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQH 332
E GVHRLVRISPFDS RRHTSF +V V+P D +++ DL+I+ +R+ GAGGQH
Sbjct: 194 EKGVHRLVRISPFDSSGRRHTSFVSVDVMPEL-DDEIEIEVRTEDLKIDTYRATGAGGQH 252
Query: 333 ANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQS 392
NTTDSAVR+ HIP+GI TCQ+ERSQ +N+ AM +L++++ Q E + + AE
Sbjct: 253 INTTDSAVRMTHIPSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGE 312
Query: 393 LTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+I WG+QIR+YV HPY MVKD RTNYE + +V++GDLD FI +YL + +
Sbjct: 313 QKEIGWGSQIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDDFINAYLRSRI 365
>gi|148267214|ref|YP_001246157.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
JH9]
gi|151220935|ref|YP_001331757.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
str. Newman]
gi|221141228|ref|ZP_03565721.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
str. JKD6009]
gi|253315812|ref|ZP_04839025.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
str. CF-Marseille]
gi|253732798|ref|ZP_04866963.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
TCH130]
gi|258418241|ref|ZP_05682506.1| peptide chain release factor 2 [Staphylococcus aureus A9763]
gi|258430733|ref|ZP_05688445.1| peptide chain release factor 2 [Staphylococcus aureus A9299]
gi|258440954|ref|ZP_05690789.1| peptide chain release factor 2 [Staphylococcus aureus A8115]
gi|258445784|ref|ZP_05693961.1| peptide chain release factor 2 [Staphylococcus aureus A6300]
gi|258449595|ref|ZP_05697697.1| peptide chain release factor 2 [Staphylococcus aureus A6224]
gi|258452962|ref|ZP_05700956.1| peptide chain release factor 2 [Staphylococcus aureus A5948]
gi|258453995|ref|ZP_05701967.1| peptide chain release factor 2 [Staphylococcus aureus A5937]
gi|269202375|ref|YP_003281644.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
ED98]
gi|282895050|ref|ZP_06303271.1| peptide chain release factor 2 [Staphylococcus aureus A8117]
gi|282916096|ref|ZP_06323859.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
D139]
gi|282922051|ref|ZP_06329748.1| peptide chain release factor 2 [Staphylococcus aureus A9765]
gi|282926620|ref|ZP_06334250.1| peptide chain release factor 2 [Staphylococcus aureus A10102]
gi|283769917|ref|ZP_06342809.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
H19]
gi|297208519|ref|ZP_06924948.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300912611|ref|ZP_07130054.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
aureus TCH70]
gi|304381625|ref|ZP_07364275.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|379014042|ref|YP_005290278.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
VC40]
gi|384549614|ref|YP_005738866.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
JKD6159]
gi|384861422|ref|YP_005744142.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
str. JKD6008]
gi|386728520|ref|YP_006194903.1| peptide chain release factor 2 (RF-2) [Staphylococcus aureus subsp.
aureus 71193]
gi|404478154|ref|YP_006709584.1| peptide chain release factor 2 [Staphylococcus aureus 08BA02176]
gi|415689250|ref|ZP_11452649.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CGS01]
gi|415693279|ref|ZP_11455112.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CGS03]
gi|416842496|ref|ZP_11905045.1| peptide chain release factor 2 [Staphylococcus aureus O11]
gi|417650425|ref|ZP_12300196.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21189]
gi|417652465|ref|ZP_12302212.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21172]
gi|417655111|ref|ZP_12304825.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21193]
gi|417802439|ref|ZP_12449497.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21318]
gi|417890507|ref|ZP_12534580.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21200]
gi|417892399|ref|ZP_12536449.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21201]
gi|417900179|ref|ZP_12544074.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21259]
gi|418979251|ref|ZP_13527048.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Staphylococcus
aureus subsp. aureus DR10]
gi|422746643|ref|ZP_16800574.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
MRSA131]
gi|147740283|gb|ABQ48581.1| bacterial peptide chain release factor 2 (bRF-2) [Staphylococcus
aureus subsp. aureus JH9]
gi|150373735|dbj|BAF66995.1| peptide chain release factor 2, programmed frameshift
[Staphylococcus aureus subsp. aureus str. Newman]
gi|253729163|gb|EES97892.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
TCH130]
gi|257839034|gb|EEV63513.1| peptide chain release factor 2 [Staphylococcus aureus A9763]
gi|257849405|gb|EEV73375.1| peptide chain release factor 2 [Staphylococcus aureus A9299]
gi|257852468|gb|EEV76389.1| peptide chain release factor 2 [Staphylococcus aureus A8115]
gi|257855360|gb|EEV78298.1| peptide chain release factor 2 [Staphylococcus aureus A6300]
gi|257857103|gb|EEV80002.1| peptide chain release factor 2 [Staphylococcus aureus A6224]
gi|257859473|gb|EEV82327.1| peptide chain release factor 2 [Staphylococcus aureus A5948]
gi|257863860|gb|EEV86616.1| peptide chain release factor 2 [Staphylococcus aureus A5937]
gi|262074665|gb|ACY10638.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
ED98]
gi|282320044|gb|EFB50391.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
D139]
gi|282591513|gb|EFB96585.1| peptide chain release factor 2 [Staphylococcus aureus A10102]
gi|282593709|gb|EFB98701.1| peptide chain release factor 2 [Staphylococcus aureus A9765]
gi|282762546|gb|EFC02685.1| peptide chain release factor 2 [Staphylococcus aureus A8117]
gi|283460064|gb|EFC07154.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
H19]
gi|296886774|gb|EFH25678.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300886857|gb|EFK82059.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
aureus TCH70]
gi|302332463|gb|ADL22656.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
JKD6159]
gi|302750651|gb|ADL64828.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
str. JKD6008]
gi|304339988|gb|EFM05932.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|315129439|gb|EFT85432.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CGS03]
gi|315196430|gb|EFU26781.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CGS01]
gi|320139911|gb|EFW31772.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
MRSA131]
gi|323438713|gb|EGA96454.1| peptide chain release factor 2 [Staphylococcus aureus O11]
gi|329723780|gb|EGG60308.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21189]
gi|329724575|gb|EGG61082.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21172]
gi|329729572|gb|EGG65973.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21193]
gi|334274439|gb|EGL92757.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21318]
gi|341842951|gb|EGS84184.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21259]
gi|341854642|gb|EGS95508.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21200]
gi|341857861|gb|EGS98671.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21201]
gi|374362739|gb|AEZ36844.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
VC40]
gi|379992930|gb|EIA14379.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Staphylococcus
aureus subsp. aureus DR10]
gi|384229813|gb|AFH69060.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Staphylococcus
aureus subsp. aureus 71193]
gi|404439643|gb|AFR72836.1| peptide chain release factor 2 [Staphylococcus aureus 08BA02176]
gi|408423142|emb|CCJ10553.1| Peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
ST228]
gi|408425132|emb|CCJ12519.1| Peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
ST228]
gi|408427120|emb|CCJ14483.1| Peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
ST228]
gi|408429107|emb|CCJ26272.1| Peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
ST228]
gi|408431095|emb|CCJ18410.1| Peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
ST228]
gi|408433089|emb|CCJ20374.1| Peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
ST228]
gi|408435080|emb|CCJ22340.1| Peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
ST228]
gi|408437065|emb|CCJ24308.1| Peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
ST228]
Length = 331
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 143/330 (43%), Positives = 211/330 (63%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
+ +PN WD+ A I ++ +L + K + E+ + L +EE D E++ +
Sbjct: 2 MAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEDLE 61
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
+ ++ + K E EL LL G D + +E+ GAGGTES DWA+M+ +MY+ + +++G
Sbjct: 62 QEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKG 121
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
++V +D +PG+ AGIK T+ + G A+GY KAE GVHRLVRISPFDS RRHTSFA+
Sbjct: 122 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASC 181
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
VIP+ + ++IN D+ ++ FR+ GAGGQH N T+SA+RI H P+GI QNERS
Sbjct: 182 DVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERS 241
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
Q +N+ +AM +L+S++ QL++ QA+ AE +I WG+QIR+YV HPY MVKD RT
Sbjct: 242 QIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRT 301
Query: 419 NYEVSDPDSVLEGDLDGFILSYLSASLDKD 448
N E D+V++GD+ FI SYL ++ D
Sbjct: 302 NEETGKVDAVMDGDIGPFIESYLRQTMSHD 331
>gi|147732321|sp|Q68X96.2|RF2_RICTY RecName: Full=Peptide chain release factor 2; Short=RF-2
Length = 369
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 150/368 (40%), Positives = 233/368 (63%), Gaps = 5/368 (1%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
+++ I QS+++I + L ++L +RL L P+LW++ +A + RE ++ K+
Sbjct: 6 ENYIKNIEQSLELIWRSLDIESLTIRLTELEELTADPSLWNNNANAQILLREKTNIEEKL 65
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
+ + +++ +A END E + + + + + E + L S E D +
Sbjct: 66 NVFNNLKSNFEDILELEAMAEVENDFETLNQIEQDFKKLSIIAAKLETECLFSDESDYNN 125
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
C++E+ AGAGGTES DWAS++++MY +A+R G++ +++ + GE GIK TI++ G+
Sbjct: 126 CFLEINAGAGGTESHDWASIMMRMYLRFAERLGFKTQIINMINGEEVGIKSCTIRIIGKR 185
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
A+G+ K E GVHRLVRISPF++ +R TSFA+ V P D + I + DLRI+ FR+
Sbjct: 186 AYGWFKTEAGVHRLVRISPFNAAGKRMTSFASSWVYPEI-DDDIAITIEDKDLRIDTFRA 244
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQM 385
GAGGQH NTTDSAVRI HIPT CQ++RSQH+NKA AM +LQ+++ +LE+ ++
Sbjct: 245 SGAGGQHVNTTDSAVRITHIPTNTVTQCQSDRSQHKNKAQAMKMLQAKLYKLEMQKRTDS 304
Query: 386 NAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ + TD SWG+QIR+YVL PY++VKDLRT+YE SD VL+G+L+ F+ SASL
Sbjct: 305 VDKQNANKTDNSWGHQIRSYVLQPYQIVKDLRTDYETSDTKGVLDGNLENFV----SASL 360
Query: 446 DKDEGGQQ 453
+ G +
Sbjct: 361 AMNASGNK 368
>gi|397670209|ref|YP_006511744.1| peptide chain release factor 2 [Propionibacterium propionicum
F0230a]
gi|395141892|gb|AFN45999.1| peptide chain release factor 2 [Propionibacterium propionicum
F0230a]
Length = 371
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 156/360 (43%), Positives = 223/360 (61%), Gaps = 8/360 (2%)
Query: 81 SEGDWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGS 140
++ D + + +S++ I+ L + L+ E+ P+LW+D +A R++ +
Sbjct: 2 ADADLMTQIDQLDRSLESIEAVADLPGLRAEIAQLAEEVAAPDLWNDQENAQRVTSTLSA 61
Query: 141 LMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGE 200
+++ + L + M++LA EEND E E L + R+ + E+ LLSGE
Sbjct: 62 RQAEVERLDGLRGRLDDAAVMLELAVEENDAEARTEVENELNRLAREIEALEVRTLLSGE 121
Query: 201 LDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIK 260
D I ++A AGG ++ D+A +++MY WA+R GY V + D E AG+K AT
Sbjct: 122 YDSREALITIRAEAGGVDAADFAEKLMRMYLRWAERHGYAVEVYDTSYAEEAGLKSATFA 181
Query: 261 VDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRI 320
V +A+G E G HRLVRISPFD+ RR TSFA V V+P + + + H+ I ESD+R+
Sbjct: 182 VKAPFAYGTLSVEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVT-EETDHIDIPESDIRV 240
Query: 321 ERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIA 380
+ FRS G GGQ NTTDSAVRI H+PTG+ +CQNE+SQ QNKA+A+ VLQSR+ LE+A
Sbjct: 241 DVFRSSGPGGQSVNTTDSAVRITHLPTGVVVSCQNEKSQLQNKAAALRVLQSRL--LELA 298
Query: 381 RQ---AQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
RQ +MNA SWG Q+R+YV++PY+MVKDLRT YEV +PD+V +GDLDGFI
Sbjct: 299 RQEREKEMNALKGDGGN--SWGAQMRSYVMNPYQMVKDLRTEYEVGNPDAVFDGDLDGFI 356
>gi|406837850|ref|ZP_11097444.1| peptide Chain Release Factor 2 [Lactobacillus vini DSM 20605]
Length = 333
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 144/325 (44%), Positives = 212/325 (65%), Gaps = 2/325 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREE-NDTELELESLEA 180
PN W+D A + E+ +L K K + + ++++ +EE D EL+ E
Sbjct: 4 PNFWNDQKAAQLVIDENNALKTKFDNFKLLNDVIDDLKVLVEMLKEEPTDQELQHELDSK 63
Query: 181 LLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYR 240
L + K + +L+ LL+G+ D + +E+ GAGGTES DW SM+L+MY WAQ+ ++
Sbjct: 64 LNKAQHKLQNYQLELLLNGKYDAHNALLEIHPGAGGTESQDWGSMLLRMYDRWAQQHQFK 123
Query: 241 VTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAV 300
+ ++D + GE AGIK T+++ G+ A+GY ++E GVHRLVRISPFD+ RRHTSFA+V V
Sbjct: 124 IEVLDYLAGEEAGIKSVTLQIKGKNAYGYLRSEKGVHRLVRISPFDAAGRRHTSFASVNV 183
Query: 301 IPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQH 360
+P D + V++ D+++E FRS GAGGQH N T SAVR+IHIPTGI + Q +RSQ
Sbjct: 184 MPEL-DDNVEVELRPEDIKMEVFRSSGAGGQHINKTSSAVRLIHIPTGIVVSSQAQRSQF 242
Query: 361 QNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNY 420
QN+A+A +L+SR+ +L++ Q + A+ +I WG+QIR+YV HPY +VKD RT Y
Sbjct: 243 QNRATAESMLRSRLYELKLEEQEKKKAQIQGKQLEIGWGSQIRSYVFHPYSLVKDHRTGY 302
Query: 421 EVSDPDSVLEGDLDGFILSYLSASL 445
E + +V++GDLDGFI +YL L
Sbjct: 303 ETGNIQAVMDGDLDGFINAYLQYQL 327
>gi|415727369|ref|ZP_11471467.1| peptide chain release factor 2 [Gardnerella vaginalis 00703Dmash]
gi|388062266|gb|EIK84884.1| peptide chain release factor 2 [Gardnerella vaginalis 00703Dmash]
Length = 380
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 147/339 (43%), Positives = 218/339 (64%), Gaps = 2/339 (0%)
Query: 99 IKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEH 158
I+K L +L + L + +P LWDD HA +++ + + ++K ++A +Q + +
Sbjct: 20 IEKALDVDSLKATIADLEKQAAEPGLWDDSEHAQQVTSKLSAAQSQLKRLQAVDQRIDDT 79
Query: 159 IDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTE 218
+I+L +EE D + E+ + L + + + E+ LL GE D S + +++GAGG +
Sbjct: 80 KTLIELGQEEGDADSMSEAQDELGNIAHELDDMEVQTLLDGEYDARSAVVTIRSGAGGVD 139
Query: 219 SMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHR 278
+ D+A M+L+MY WA+R GY+ +MD E AGIK AT +VD YA+G E G HR
Sbjct: 140 AADFAQMLLRMYLRWAERNGYKTKMMDTSYAEEAGIKSATFQVDAPYAYGRLSVEGGTHR 199
Query: 279 LVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDS 338
+VRISPFD+ RR T F+AV VIP +++ H+ I +SD+R++ F++ G GGQ NTT S
Sbjct: 200 MVRISPFDNQGRRQTGFSAVEVIPLV-EATDHIDIPDSDIRVDTFQASGPGGQGVNTTYS 258
Query: 339 AVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISW 398
AVRI H+PTG+ + Q+ERSQ QN+A+AM VLQSR+ L+ A +A E + SW
Sbjct: 259 AVRITHLPTGLVVSMQDERSQIQNRAAAMAVLQSRLLVLKHAEEAAKKKELAGDIK-ASW 317
Query: 399 GNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
G+Q+R+YVLHPY+MVKDLRT YE S +V +GD+DGFI
Sbjct: 318 GDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDGFI 356
>gi|15923744|ref|NP_371278.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
Mu50]
gi|15926431|ref|NP_373964.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
N315]
gi|82750458|ref|YP_416199.1| peptide chain release factor 2 [Staphylococcus aureus RF122]
gi|156979082|ref|YP_001441341.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
Mu3]
gi|253731382|ref|ZP_04865547.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|255005545|ref|ZP_05144146.2| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257794925|ref|ZP_05643904.1| peptide chain release factor 2 [Staphylococcus aureus A9781]
gi|262052329|ref|ZP_06024532.1| peptide chain release factor 2 [Staphylococcus aureus 930918-3]
gi|296275163|ref|ZP_06857670.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
MR1]
gi|379020525|ref|YP_005297187.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
M013]
gi|384547036|ref|YP_005736289.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
ED133]
gi|384864079|ref|YP_005749438.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|384869340|ref|YP_005752054.1| Peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
T0131]
gi|385781080|ref|YP_005757251.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
11819-97]
gi|387149917|ref|YP_005741481.1| Peptide chain release factor 2 [Staphylococcus aureus 04-02981]
gi|387602109|ref|YP_005733630.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
ST398]
gi|418280783|ref|ZP_12893608.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21178]
gi|418285829|ref|ZP_12898496.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21209]
gi|418308216|ref|ZP_12919859.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21194]
gi|418309566|ref|ZP_12921120.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21331]
gi|418313637|ref|ZP_12925122.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21334]
gi|418315392|ref|ZP_12926856.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21340]
gi|418318355|ref|ZP_12929760.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21232]
gi|418322194|ref|ZP_12933531.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
VCU006]
gi|418423897|ref|ZP_12997039.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
VRS1]
gi|418426874|ref|ZP_12999895.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
VRS2]
gi|418429804|ref|ZP_13002730.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
VRS3a]
gi|418432700|ref|ZP_13005493.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
VRS4]
gi|418436415|ref|ZP_13008225.1| prfB- peptide chain release factor RF-2 [Staphylococcus aureus
subsp. aureus VRS5]
gi|418439312|ref|ZP_13011028.1| prfB- peptide chain release factor RF-2 [Staphylococcus aureus
subsp. aureus VRS6]
gi|418442290|ref|ZP_13013902.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
VRS7]
gi|418445418|ref|ZP_13016904.1| prfB- peptide chain release factor RF-2 [Staphylococcus aureus
subsp. aureus VRS8]
gi|418448357|ref|ZP_13019757.1| prfB- peptide chain release factor RF-2 [Staphylococcus aureus
subsp. aureus VRS9]
gi|418451178|ref|ZP_13022517.1| prfB- peptide chain release factor RF-2 [Staphylococcus aureus
subsp. aureus VRS10]
gi|418454200|ref|ZP_13025468.1| prfB- peptide chain release factor RF-2 [Staphylococcus aureus
subsp. aureus VRS11a]
gi|418457104|ref|ZP_13028314.1| prfB- peptide chain release factor RF-2 [Staphylococcus aureus
subsp. aureus VRS11b]
gi|418560578|ref|ZP_13125091.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21252]
gi|418569746|ref|ZP_13134060.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21283]
gi|418574180|ref|ZP_13138357.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21333]
gi|418578653|ref|ZP_13142748.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1114]
gi|418600554|ref|ZP_13164010.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21343]
gi|418639427|ref|ZP_13201674.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-3]
gi|418640930|ref|ZP_13203146.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-24]
gi|418647137|ref|ZP_13209216.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-88]
gi|418651038|ref|ZP_13213049.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-91]
gi|418654275|ref|ZP_13216188.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-99]
gi|418659140|ref|ZP_13220830.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-111]
gi|418660976|ref|ZP_13222582.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-122]
gi|418872469|ref|ZP_13426808.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-125]
gi|418874775|ref|ZP_13429041.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIGC93]
gi|418877599|ref|ZP_13431838.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1165]
gi|418880458|ref|ZP_13434678.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1213]
gi|418883384|ref|ZP_13437583.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1769]
gi|418886046|ref|ZP_13440196.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1150]
gi|418888652|ref|ZP_13442788.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1524]
gi|418894210|ref|ZP_13448311.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1057]
gi|418903029|ref|ZP_13457070.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1770]
gi|418904873|ref|ZP_13458902.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIGC345D]
gi|418911431|ref|ZP_13465414.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG547]
gi|418913943|ref|ZP_13467915.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|418919626|ref|ZP_13473569.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIGC348]
gi|418924992|ref|ZP_13478895.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG2018]
gi|418928077|ref|ZP_13481963.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1612]
gi|418930787|ref|ZP_13484635.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1750]
gi|418933689|ref|ZP_13487513.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIGC128]
gi|418948884|ref|ZP_13501164.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-157]
gi|418952399|ref|ZP_13504429.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-160]
gi|418952673|ref|ZP_13504689.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-189]
gi|418987657|ref|ZP_13535330.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1835]
gi|418990644|ref|ZP_13538305.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1096]
gi|418993467|ref|ZP_13541104.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG290]
gi|419775539|ref|ZP_14301478.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CO-23]
gi|419784550|ref|ZP_14310314.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-M]
gi|422744898|ref|ZP_16798853.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
MRSA177]
gi|424775720|ref|ZP_18202711.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CM05]
gi|424784611|ref|ZP_18211421.1| Peptide chain release factor 2 [Staphylococcus aureus CN79]
gi|440706819|ref|ZP_20887541.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21282]
gi|440734234|ref|ZP_20913846.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
DSM 20231]
gi|443637554|ref|ZP_21121630.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21236]
gi|448741992|ref|ZP_21723948.1| peptide chain release factor 2 [Staphylococcus aureus KT/314250]
gi|448744324|ref|ZP_21726218.1| peptide chain release factor 2 [Staphylococcus aureus KT/Y21]
gi|13700645|dbj|BAB41942.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
N315]
gi|14246523|dbj|BAB56916.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
Mu50]
gi|82655989|emb|CAI80394.1| peptide chain release factor 2 [Staphylococcus aureus RF122]
gi|156721217|dbj|BAF77634.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
Mu3]
gi|253724907|gb|EES93636.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|257788897|gb|EEV27237.1| peptide chain release factor 2 [Staphylococcus aureus A9781]
gi|259159769|gb|EEW44810.1| peptide chain release factor 2 [Staphylococcus aureus 930918-3]
gi|283470047|emb|CAQ49258.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
ST398]
gi|285816456|gb|ADC36943.1| Peptide chain release factor 2 [Staphylococcus aureus 04-02981]
gi|298694086|gb|ADI97308.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
ED133]
gi|312829246|emb|CBX34088.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|320141998|gb|EFW33826.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
MRSA177]
gi|329313475|gb|AEB87888.1| Peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
T0131]
gi|359829834|gb|AEV77812.1| Peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
M013]
gi|364522069|gb|AEW64819.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
11819-97]
gi|365167354|gb|EHM58819.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21178]
gi|365169390|gb|EHM60643.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21209]
gi|365223803|gb|EHM65078.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
VCU006]
gi|365235336|gb|EHM76255.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21334]
gi|365238899|gb|EHM79727.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21331]
gi|365240804|gb|EHM81567.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21194]
gi|365243224|gb|EHM83910.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21232]
gi|365244022|gb|EHM84690.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21340]
gi|371971642|gb|EHO89039.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21252]
gi|371980277|gb|EHO97491.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21333]
gi|371985352|gb|EHP02425.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21283]
gi|374393361|gb|EHQ64674.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21343]
gi|375016561|gb|EHS10200.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-99]
gi|375017453|gb|EHS11067.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-3]
gi|375020127|gb|EHS13668.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-24]
gi|375026850|gb|EHS20228.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-91]
gi|375030960|gb|EHS24255.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-88]
gi|375036385|gb|EHS29458.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-111]
gi|375039751|gb|EHS32669.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-122]
gi|375367219|gb|EHS71187.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-125]
gi|375368874|gb|EHS72772.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-160]
gi|375370391|gb|EHS74200.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-157]
gi|375376387|gb|EHS79922.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-189]
gi|377696307|gb|EHT20663.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1165]
gi|377696680|gb|EHT21035.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1114]
gi|377698558|gb|EHT22906.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1057]
gi|377716050|gb|EHT40235.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1769]
gi|377716654|gb|EHT40836.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1750]
gi|377719445|gb|EHT43615.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1835]
gi|377722766|gb|EHT46891.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1096]
gi|377724809|gb|EHT48924.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG547]
gi|377727344|gb|EHT51451.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1150]
gi|377732896|gb|EHT56946.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1213]
gi|377737989|gb|EHT61998.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1612]
gi|377742044|gb|EHT66029.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1770]
gi|377746287|gb|EHT70258.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG2018]
gi|377746626|gb|EHT70596.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG290]
gi|377754162|gb|EHT78071.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1524]
gi|377757445|gb|EHT81333.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|377766413|gb|EHT90246.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIGC345D]
gi|377767151|gb|EHT90964.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIGC348]
gi|377771469|gb|EHT95223.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIGC128]
gi|377772115|gb|EHT95868.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIGC93]
gi|383363994|gb|EID41319.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
IS-M]
gi|383970762|gb|EID86855.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CO-23]
gi|387720235|gb|EIK08148.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
VRS3a]
gi|387720486|gb|EIK08396.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
VRS2]
gi|387722260|gb|EIK10085.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
VRS1]
gi|387726884|gb|EIK14424.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
VRS4]
gi|387729085|gb|EIK16551.1| prfB- peptide chain release factor RF-2 [Staphylococcus aureus
subsp. aureus VRS5]
gi|387731393|gb|EIK18701.1| prfB- peptide chain release factor RF-2 [Staphylococcus aureus
subsp. aureus VRS6]
gi|387737592|gb|EIK24657.1| prfB- peptide chain release factor RF-2 [Staphylococcus aureus
subsp. aureus VRS8]
gi|387738825|gb|EIK25842.1| prfB- peptide chain release factor RF-2 [Staphylococcus aureus
subsp. aureus VRS9]
gi|387739267|gb|EIK26275.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
VRS7]
gi|387746342|gb|EIK33074.1| prfB- peptide chain release factor RF-2 [Staphylococcus aureus
subsp. aureus VRS10]
gi|387747174|gb|EIK33884.1| prfB- peptide chain release factor RF-2 [Staphylococcus aureus
subsp. aureus VRS11a]
gi|387748704|gb|EIK35373.1| prfB- peptide chain release factor RF-2 [Staphylococcus aureus
subsp. aureus VRS11b]
gi|402346795|gb|EJU81871.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CM05]
gi|421957210|gb|EKU09534.1| Peptide chain release factor 2 [Staphylococcus aureus CN79]
gi|436431262|gb|ELP28615.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
DSM 20231]
gi|436506693|gb|ELP42464.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21282]
gi|443405545|gb|ELS64147.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21236]
gi|445547384|gb|ELY15654.1| peptide chain release factor 2 [Staphylococcus aureus KT/314250]
gi|445562327|gb|ELY18503.1| peptide chain release factor 2 [Staphylococcus aureus KT/Y21]
Length = 330
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 143/330 (43%), Positives = 211/330 (63%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
+ +PN WD+ A I ++ +L + K + E+ + L +EE D E++ +
Sbjct: 1 MAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEDLE 60
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
+ ++ + K E EL LL G D + +E+ GAGGTES DWA+M+ +MY+ + +++G
Sbjct: 61 QEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKG 120
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
++V +D +PG+ AGIK T+ + G A+GY KAE GVHRLVRISPFDS RRHTSFA+
Sbjct: 121 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASC 180
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
VIP+ + ++IN D+ ++ FR+ GAGGQH N T+SA+RI H P+GI QNERS
Sbjct: 181 DVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERS 240
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
Q +N+ +AM +L+S++ QL++ QA+ AE +I WG+QIR+YV HPY MVKD RT
Sbjct: 241 QIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRT 300
Query: 419 NYEVSDPDSVLEGDLDGFILSYLSASLDKD 448
N E D+V++GD+ FI SYL ++ D
Sbjct: 301 NEETGKVDAVMDGDIGPFIESYLRQTMSHD 330
>gi|312884019|ref|ZP_07743736.1| peptide chain release factor RF-2 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309368477|gb|EFP96012.1| peptide chain release factor RF-2 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 332
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 146/331 (44%), Positives = 218/331 (65%), Gaps = 2/331 (0%)
Query: 115 LSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELE 174
++AEL +P++W++P A + +E SL ++ + Q + + +++LA EE D E
Sbjct: 4 VNAELEQPDVWNEPERAQALGKERSSLEAVVETIDQLNQGVEDVEGLLELAVEEEDQETF 63
Query: 175 LESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWA 234
E L+ + K ++ E + SG+ D CYI++Q+G+GGTE+ DW SM+L+MY WA
Sbjct: 64 DEIEPELIELEFKLEKLEFRRMFSGDHDSSDCYIDLQSGSGGTEAQDWTSMLLRMYLRWA 123
Query: 235 QRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTS 294
+ +G++ +++ GE+AG+K ATIK+ GEYA+G+ + E GVHRLVR SPFDS RRHTS
Sbjct: 124 EAKGFKTEVIEVSEGEVAGLKGATIKISGEYAYGWLRTETGVHRLVRKSPFDSSGRRHTS 183
Query: 295 FAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQ 354
FA+ + P D + + IN +DLRI+ +R+ GAGGQH NTT+SAVRI H+PT CQ
Sbjct: 184 FASAFIYPEI-DDNIQIDINPADLRIDVYRASGAGGQHVNTTESAVRITHVPTNTVVQCQ 242
Query: 355 NERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVK 414
N+RSQH+NK AM L++++ +LEI +Q + + +DI WG+QIR+YVL R +K
Sbjct: 243 NDRSQHKNKDQAMKQLRAKLFELEIQKQNAEKQANEDAKSDIGWGSQIRSYVLDDSR-IK 301
Query: 415 DLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
DLRT E + +VL+GDLD FI + L + L
Sbjct: 302 DLRTGIENRNTQAVLDGDLDKFIEASLKSGL 332
>gi|90409172|ref|ZP_01217287.1| putative peptide chain release factor 2 [Psychromonas sp. CNPT3]
gi|90309717|gb|EAS37887.1| putative peptide chain release factor 2 [Psychromonas sp. CNPT3]
Length = 349
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 147/335 (43%), Positives = 217/335 (64%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++ EL P +W+DP A + +E +L ++ +KA E E + +++LA +E D
Sbjct: 17 RLEEVTRELESPEVWNDPERAQALGKERSALELIVETIKALEIGCDEILMLVELAVDEQD 76
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
+ E+ L + +K + E + SG+ D CSCY+++Q+G+GGTE+ DWA+M+L+MY
Sbjct: 77 QDTFDEAANETLELEKKLEVLEFRRMFSGKNDSCSCYLDIQSGSGGTEAQDWANMLLRMY 136
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
W + GY+ LM+ G++AGIK ATI+ GEYA+G+ + E GVHRLVR SPFDS +
Sbjct: 137 LRWGEANGYKTELMEVSAGDVAGIKGATIRFSGEYAYGWLRTETGVHRLVRKSPFDSSGK 196
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSFA+ V P D + + IN ++LRI+ +R+ GAGGQH NTT+SAVRI H+PT I
Sbjct: 197 RHTSFASAFVYPEVED-NIDIVINPAELRIDVYRASGAGGQHVNTTESAVRITHLPTNIV 255
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+NK AM L++++ + E+ Q + +DI WG+QIR+YVL
Sbjct: 256 VQCQNDRSQHKNKDQAMKQLKAKLYEHEVQIQNVEKQISEDNKSDIGWGSQIRSYVLDDA 315
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E +P VL+G+L+ FI + L + L
Sbjct: 316 R-IKDLRTGVESRNPQRVLDGELNEFIEASLKSGL 349
>gi|418581468|ref|ZP_13145549.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1605]
gi|418891396|ref|ZP_13445513.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1176]
gi|418897171|ref|ZP_13451244.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIGC341D]
gi|418900141|ref|ZP_13454200.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1214]
gi|418908547|ref|ZP_13462555.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG149]
gi|418916619|ref|ZP_13470580.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1267]
gi|418922423|ref|ZP_13476340.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1233]
gi|418981657|ref|ZP_13529372.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1242]
gi|418985295|ref|ZP_13532984.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1500]
gi|377705223|gb|EHT29531.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1214]
gi|377707137|gb|EHT31431.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1500]
gi|377707477|gb|EHT31770.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1242]
gi|377711695|gb|EHT35924.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1605]
gi|377732353|gb|EHT56404.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1176]
gi|377735746|gb|EHT59776.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1233]
gi|377751124|gb|EHT75058.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG1267]
gi|377755886|gb|EHT79784.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIG149]
gi|377761950|gb|EHT85819.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CIGC341D]
Length = 330
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 143/330 (43%), Positives = 211/330 (63%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
+ +PN WD+ A I ++ +L + K + E+ + L +EE D E++ +
Sbjct: 1 MAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDGEMKEDLE 60
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
+ ++ + K E EL LL G D + +E+ GAGGTES DWA+M+ +MY+ + +++G
Sbjct: 61 QEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKG 120
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
++V +D +PG+ AGIK T+ + G A+GY KAE GVHRLVRISPFDS RRHTSFA+
Sbjct: 121 FKVKTVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASC 180
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
VIP+ + ++IN D+ ++ FR+ GAGGQH N T+SA+RI H P+GI QNERS
Sbjct: 181 DVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERS 240
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
Q +N+ +AM +L+S++ QL++ QA+ AE +I WG+QIR+YV HPY MVKD RT
Sbjct: 241 QIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRT 300
Query: 419 NYEVSDPDSVLEGDLDGFILSYLSASLDKD 448
N E D+V++GD+ FI SYL ++ D
Sbjct: 301 NEETGKVDAVMDGDIGPFIESYLRQTMSHD 330
>gi|443627028|ref|ZP_21111430.1| putative Peptide chain release factor 2 [Streptomyces
viridochromogenes Tue57]
gi|443339445|gb|ELS53685.1| putative Peptide chain release factor 2 [Streptomyces
viridochromogenes Tue57]
Length = 368
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 153/357 (42%), Positives = 223/357 (62%), Gaps = 8/357 (2%)
Query: 84 DWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
D +++ +++ I+ L L + +L + P+LWD+P A +I+ + L
Sbjct: 5 DVSEELKSLSSTMESIEAVLDLDRLRADIAVLEEQAAAPSLWDNPDEAQKITSKLSHLQA 64
Query: 144 KMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDP 203
++++ +A + + + ++A EE+D + E+ L +R+ E E+ LLSGE D
Sbjct: 65 EVRKAEALRSRIDDLAVLFEMAEEEDDPDTRAEAESELAAVRKALDEMEVRTLLSGEYDA 124
Query: 204 CSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDG 263
+ ++A AGG ++ D+A + +MY WA++RGY+ + + E AGIK T V
Sbjct: 125 REALVNIRAEAGGVDAADFAERLQRMYLRWAEQRGYKTEVYETSYAEEAGIKSTTFAVQA 184
Query: 264 EYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERF 323
YA+G E G HRLVRISPFD+ RR TSFA V V+P + S HV+I+ESDLRI+ +
Sbjct: 185 PYAYGTLSVEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVV-EQSDHVEIDESDLRIDVY 243
Query: 324 RSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIAR-- 381
RS G GGQ NTTDSAVRI H+PTGI +CQNERSQ QNKA+AM VLQ+++ LE R
Sbjct: 244 RSSGPGGQGVNTTDSAVRITHLPTGIVVSCQNERSQIQNKATAMNVLQAKL--LERRRQE 301
Query: 382 -QAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
QA+M+A SWGNQ+R+YVLHPY+MVKDLRT +EV +P++V G++DGF+
Sbjct: 302 EQAKMDALKGDGGN--SWGNQMRSYVLHPYQMVKDLRTEFEVGNPEAVFNGEIDGFL 356
>gi|315649817|ref|ZP_07902900.1| peptide chain release factor 2 [Paenibacillus vortex V453]
gi|315274791|gb|EFU38172.1| peptide chain release factor 2 [Paenibacillus vortex V453]
Length = 339
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 144/327 (44%), Positives = 208/327 (63%), Gaps = 1/327 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
P+ WDD A + E ++ + + + +Q+ + + M +LA EE D L E E +
Sbjct: 12 PDFWDDNEKAQALIAEMNAVKSSVDQYQKLQQDYDDAVVMTELADEEGDDSLAGEIGETI 71
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
+ ++ +E EL LL+ D + +E+ GAGGTES DW M+ +MY WA++RG++V
Sbjct: 72 KDLVKRVEEFELQLLLNQPYDKMNAILELHPGAGGTESQDWGQMLHRMYTRWAEKRGFKV 131
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
+D +PG+ AGIK T+ + G A+GY KAE GVHRLVRISPFDS RRHTSF + V+
Sbjct: 132 ETLDYLPGDEAGIKSVTLLIKGYNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVSCDVV 191
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D + I DL+I+ +R+ GAGGQH NTTDSAVRI H+PTG+ TCQNERSQ +
Sbjct: 192 PEIND-EIELDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTGVVVTCQNERSQIK 250
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
N+ AM +L+S++ + +I Q + AE ++I+WG+QIR+YV HPY M KD RT E
Sbjct: 251 NRERAMTMLRSKLYERKIEEQKKELAEIRGEQSEIAWGSQIRSYVFHPYSMAKDHRTQVE 310
Query: 422 VSDPDSVLEGDLDGFILSYLSASLDKD 448
+ +V++GDLD FI YL + + ++
Sbjct: 311 TGNIGAVMDGDLDAFIDGYLRSQIKQE 337
>gi|441206141|ref|ZP_20972932.1| peptide chain release factor 2 [Mycobacterium smegmatis MKD8]
gi|440628689|gb|ELQ90485.1| peptide chain release factor 2 [Mycobacterium smegmatis MKD8]
Length = 368
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 151/355 (42%), Positives = 221/355 (62%), Gaps = 4/355 (1%)
Query: 84 DWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
D ++ AA+ ++ +++ L L R+ L + + PNLWDD A +++ +
Sbjct: 4 DRQADIAALDTTLTTVERVLDVDGLRNRIEQLEKDASDPNLWDDQTRAQKVTSDLSHAQN 63
Query: 144 KMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDP 203
+++ V+ Q L + + +LA E + E+ L +R + E+ LLSGE D
Sbjct: 64 ELRRVEGLRQRLDDLPVLYELAAEAGGPDEVAEADAELAKLREDIEAMEVRTLLSGEYDE 123
Query: 204 CSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDG 263
+ +++GAGG ++ DWA M+++MY WA++ Y V + D E AGIK AT V
Sbjct: 124 REAVVTIRSGAGGVDAADWAEMLMRMYIRWAEKHDYPVEIFDTSYAEEAGIKSATFAVHA 183
Query: 264 EYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERF 323
+A+G E G HRLVRISPFD+ RR TSFA V V+P +++ H+ I E+DLR++ +
Sbjct: 184 PFAYGTLSVEQGTHRLVRISPFDNQSRRQTSFADVEVLPVV-ETTDHIDIPENDLRVDVY 242
Query: 324 RSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSR-VNQLEIARQ 382
RS G GGQ NTTDSAVR+ HIPTGI TCQNE+SQ QNK SAM VLQ++ + + + +
Sbjct: 243 RSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLERKRLEER 302
Query: 383 AQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
A+++A + SWGNQ+R+YVLHPY+MVKDLRT YEV +P SVL+GD+DGF+
Sbjct: 303 AELDALKGDGGS--SWGNQMRSYVLHPYQMVKDLRTEYEVGNPASVLDGDIDGFL 355
>gi|300692007|ref|YP_003753002.1| peptide chain release factor RF-2; programmed frameshift, partial
[Ralstonia solanacearum PSI07]
gi|299079067|emb|CBJ51729.1| peptide chain release factor RF-2; programmed frameshift [Ralstonia
solanacearum PSI07]
gi|344170628|emb|CCA83051.1| peptide chain release factor RF-2; programmed frameshift [blood
disease bacterium R229]
gi|344174187|emb|CCA85969.1| peptide chain release factor RF-2; programmed frameshift [Ralstonia
syzygii R24]
Length = 300
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 143/284 (50%), Positives = 206/284 (72%), Gaps = 6/284 (2%)
Query: 160 DMIKLAREENDTELELESLEA-LLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTE 218
++ +LAREE D + +E++EA MR ++ E + SG +D +C+I++QAGAGGTE
Sbjct: 17 ELFELAREEGDDDT-VEAVEADTAGMRAIVEDMEFRRMFSGPMDAANCFIDIQAGAGGTE 75
Query: 219 SMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHR 278
+ DWASM+L+ Y + +R+G++ +++E G++AGIK A+IKV+GEYAFG+ + E GVHR
Sbjct: 76 ACDWASMLLRQYLKYCERKGFKTEVLEESEGDVAGIKSASIKVEGEYAFGFLRTETGVHR 135
Query: 279 LVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDS 338
LVR SPFDS RHTSF+++ V P D S +++N +DLR++ +R+ GAGGQH N TDS
Sbjct: 136 LVRKSPFDSAGGRHTSFSSIFVYPEV-DDSIEIEVNPADLRVDTYRASGAGGQHINKTDS 194
Query: 339 AVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQ-SLTDIS 397
AVRI HIP+GI CQN+RSQH+N+A AM +L+SR+ + E+ R+ Q A+ + S TD+
Sbjct: 195 AVRITHIPSGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHEL-RKRQAEADKLEASKTDVG 253
Query: 398 WGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
WG+QIR+YVL R +KDLRTN E+S+ VL+GDLD FI + L
Sbjct: 254 WGHQIRSYVLDQSR-IKDLRTNVEISNTQKVLDGDLDTFIEASL 296
>gi|302872499|ref|YP_003841135.1| hypothetical protein COB47_1880 [Caldicellulosiruptor obsidiansis
OB47]
gi|302575358|gb|ADL43149.1| hypothetical protein COB47_1880 [Caldicellulosiruptor obsidiansis
OB47]
Length = 372
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 150/342 (43%), Positives = 225/342 (65%), Gaps = 1/342 (0%)
Query: 108 LNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLARE 167
L L L +E + P+ W D ++ ++ ++ L K++ + + + + +L+ E
Sbjct: 30 LQSELKWLESETSNPDFWQDLENSQKVLQKIKRLKDKIERFQKLCSQWEDLKVLTELSIE 89
Query: 168 ENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVL 227
E + E+ E + LL + +K ++ +++ LL+G D + + + AGAGGTE+ DWA M+L
Sbjct: 90 EGNHEMAEELEKELLDLEKKIEDFKIEVLLNGPYDKNNAILSIHAGAGGTEAQDWAEMLL 149
Query: 228 QMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDS 287
+MY WA ++GY+V +D +PGE AGIK TI++ GE A+GY KAE GVHRLVRISPFD+
Sbjct: 150 RMYTRWAAKKGYKVETLDILPGEEAGIKNVTIRIVGENAYGYLKAEKGVHRLVRISPFDA 209
Query: 288 GKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPT 347
RRHTSFAAV V+P D T ++I E DL I+ FR+ GAGGQH N T+SAVRI HIPT
Sbjct: 210 AGRRHTSFAAVEVLPEVED-DTDIEIKEEDLEIDTFRASGAGGQHVNKTESAVRIKHIPT 268
Query: 348 GITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVL 407
GI TCQNERSQH+N+ A+ +L++++ +L+ + + + TDI WGNQIR+YV
Sbjct: 269 GIVVTCQNERSQHKNREIALKILKAKLLELKEKERREKIQKLKGEQTDIGWGNQIRSYVF 328
Query: 408 HPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKDE 449
PY +VKD RT EV + ++V++G++D FI +YL +++E
Sbjct: 329 CPYTLVKDHRTEAEVGNVEAVMDGEIDVFINAYLKKFRNEEE 370
>gi|120402908|ref|YP_952737.1| peptide chain release factor 2 [Mycobacterium vanbaalenii PYR-1]
gi|166225112|sp|A1T6D1.1|RF2_MYCVP RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|119955726|gb|ABM12731.1| bacterial peptide chain release factor 2 (bRF-2) [Mycobacterium
vanbaalenii PYR-1]
Length = 368
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 149/355 (41%), Positives = 223/355 (62%), Gaps = 4/355 (1%)
Query: 84 DWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
D ++ AA+ ++ +++ + L R+ L + + P LWDD A +++ + G
Sbjct: 4 DRQADIAALDATLTTVERVIDVDGLRGRIEQLEKDASDPQLWDDQARAQKVTSDLSHAQG 63
Query: 144 KMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDP 203
+++ ++ L + + +LA EE ++ E+ L +R + E+ LLSGE D
Sbjct: 64 ELRRIEELRGRLEDLPVLYELAAEEGGSDEVAEADAELTKLREDIEAMEVRTLLSGEYDE 123
Query: 204 CSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDG 263
+ +++GAGG ++ DWA M+++MY WA++ Y V + D E AGIK AT V
Sbjct: 124 REALVTIRSGAGGVDAADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHA 183
Query: 264 EYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERF 323
YA+G E G HRLVRISPFD+ RR TSFA V V+P + +++ H++I E D+R++ +
Sbjct: 184 PYAYGNLSVEQGTHRLVRISPFDNQNRRQTSFADVEVLPVT-ETTDHIEIPEGDVRVDVY 242
Query: 324 RSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSR-VNQLEIARQ 382
RS G GGQ NTTDSAVR+ HIPTGI TCQNE+SQ QNK SAM VLQ++ + + + +
Sbjct: 243 RSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLERKRLEER 302
Query: 383 AQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
A+M+A + SWGNQ+R+YVLHPY+MVKDLRT YEV +P +VL+GD+DGF+
Sbjct: 303 AEMDALKGDGGS--SWGNQMRSYVLHPYQMVKDLRTEYEVGNPSAVLDGDIDGFL 355
>gi|397664232|ref|YP_006505770.1| Peptide chain release factor 2 (RF-2) [Legionella pneumophila
subsp. pneumophila]
gi|395127643|emb|CCD05842.1| Peptide chain release factor 2 (RF-2) [Legionella pneumophila
subsp. pneumophila]
Length = 335
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 152/328 (46%), Positives = 212/328 (64%), Gaps = 2/328 (0%)
Query: 118 ELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELES 177
EL N+WD+P A + RE L + + Q + + ++ +LAREEND + +
Sbjct: 7 ELESSNVWDNPEQAQALGRERTQLEAIVHSLSQLSQSISDQRELFELAREENDEQTINDI 66
Query: 178 LEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRR 237
E L ++ ++ E + SG++D + Y+++QAG+GGTE+ DWA M+L+MY W +
Sbjct: 67 GEELKSIEQQVASLEFRRMFSGKMDHTNAYLDIQAGSGGTEAQDWAEMLLRMYLRWGEYH 126
Query: 238 GYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAA 297
G+ L++ PGE+AGIK ATI GEYAFG+ + E GVHRLVR SPFDSG RRHTSFAA
Sbjct: 127 GFTTELIECSPGEVAGIKSATIHFTGEYAFGWLRTETGVHRLVRKSPFDSGNRRHTSFAA 186
Query: 298 VAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNER 357
V V P D ++IN +DLRI+ +R+ GAGGQH N TDSAVRI HIP+GI CQN+R
Sbjct: 187 VFVSPEI-DDDIEIEINPADLRIDTYRASGAGGQHVNRTDSAVRITHIPSGIVVQCQNDR 245
Query: 358 SQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLR 417
SQH+NK AM L++++ +LE+ ++ S +DI WG+QIR+YVL R +KDLR
Sbjct: 246 SQHKNKDQAMKQLRAKLYELEMQKKNAEQQALEASKSDIGWGSQIRSYVLDQSR-IKDLR 304
Query: 418 TNYEVSDPDSVLEGDLDGFILSYLSASL 445
T E S+ +VL+G LD FI + L A +
Sbjct: 305 TGVETSNTQAVLDGSLDQFIEASLKAGV 332
>gi|258421538|ref|ZP_05684463.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
aureus A9719]
gi|258423403|ref|ZP_05686294.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
aureus A9635]
gi|257842464|gb|EEV66888.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
aureus A9719]
gi|257846464|gb|EEV70487.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
aureus A9635]
Length = 352
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 143/330 (43%), Positives = 211/330 (63%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
+ +PN WD+ A I ++ +L + K + E+ + L +EE D E++ +
Sbjct: 23 MAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEDLE 82
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
+ ++ + K E EL LL G D + +E+ GAGGTES DWA+M+ +MY+ + +++G
Sbjct: 83 QEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKG 142
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
++V +D +PG+ AGIK T+ + G A+GY KAE GVHRLVRISPFDS RRHTSFA+
Sbjct: 143 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASC 202
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
VIP+ + ++IN D+ ++ FR+ GAGGQH N T+SA+RI H P+GI QNERS
Sbjct: 203 DVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERS 262
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
Q +N+ +AM +L+S++ QL++ QA+ AE +I WG+QIR+YV HPY MVKD RT
Sbjct: 263 QIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRT 322
Query: 419 NYEVSDPDSVLEGDLDGFILSYLSASLDKD 448
N E D+V++GD+ FI SYL ++ D
Sbjct: 323 NEETGKVDAVMDGDIGPFIESYLRQTMSHD 352
>gi|254468217|ref|ZP_05081623.1| peptide chain release factor 2 [beta proteobacterium KB13]
gi|207087027|gb|EDZ64310.1| peptide chain release factor 2 [beta proteobacterium KB13]
Length = 351
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 143/335 (42%), Positives = 216/335 (64%), Gaps = 2/335 (0%)
Query: 107 NLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAR 166
N +L L+ + P +W+D + +I +E L ++E + + + ++ LA
Sbjct: 15 NKKEQLKELTRQQEDPKIWEDHSLSQKIGKEKRILEDTIQEFEQLNSGIENNKELFDLAF 74
Query: 167 EENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMV 226
EE+D + + + + +K + E + S LDP +C+I+ Q+G+GGTE+ DWA+M+
Sbjct: 75 EESDDSTLNDLFQDTINLDKKLGQLEFKRMFSNPLDPNNCFIDFQSGSGGTEAQDWANML 134
Query: 227 LQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFD 286
L+MY + + +G++V +M+ GE+AGIK ATIK+ G+YA+GY + E G+HRLVR SPFD
Sbjct: 135 LRMYLRYCEEKGFKVEVMEITEGEVAGIKGATIKIIGDYAYGYFRTETGIHRLVRKSPFD 194
Query: 287 SGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIP 346
SG RRHTSFA V V P D S + IN +DLRI+ +R+ GAGGQH N TDSAVRI H P
Sbjct: 195 SGSRRHTSFAGVNVYPEI-DESVEIDINPADLRIDTYRASGAGGQHINKTDSAVRITHEP 253
Query: 347 TGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYV 406
+G+ CQN+RSQH+NKA AM +L++++ ++E+ ++ + + +DI WG+QIR+YV
Sbjct: 254 SGVVVQCQNDRSQHRNKAQAMDMLKAQLYRIELDKRNEEKQAMEDAKSDIGWGHQIRSYV 313
Query: 407 LHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
L R +KDLRT EV + VL+G+LD FI L
Sbjct: 314 LDQSR-IKDLRTGVEVGNTQGVLDGNLDPFITESL 347
>gi|348170778|ref|ZP_08877672.1| putative peptide chain release factor 2 [Saccharopolyspora spinosa
NRRL 18395]
Length = 368
Score = 291 bits (744), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 152/348 (43%), Positives = 220/348 (63%), Gaps = 7/348 (2%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
++ +++ I+ + L + L AE KP+LWDD HA R+S + +++++
Sbjct: 12 LSNTLEGIESVMDLAALRANIGELEAEAAKPDLWDDVEHAQRVSSQLVHRQAELRKITEL 71
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
Q L + + +L+ +E D+ E+ E +++ + E+ LLSGE D + ++
Sbjct: 72 RQRLEDLEVLYELSEDEGDSAGLSEADEERDRLKKDLEALEVRTLLSGEYDQREAMVTIR 131
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
A AGG ++ D+A M+++MY WA+R Y + D E AG+K AT +V+ YA+G
Sbjct: 132 AEAGGVDAADFAEMLMRMYLRWAERHSYPAEVYDTSYAEEAGLKSATFRVNAPYAYGTLS 191
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
E G HRLVRISPFD+ RR TSFA V V+P + + HV I E D+R++ FRS G GGQ
Sbjct: 192 VEQGTHRLVRISPFDNQGRRQTSFAGVEVLPVV-EETDHVDIPEKDIRVDVFRSSGPGGQ 250
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQ 391
NTTDSAVRI HIPTGI +CQNE+SQ QNKA+AM VLQS++ +AR+ +
Sbjct: 251 SVNTTDSAVRITHIPTGIVVSCQNEKSQLQNKAAAMRVLQSKL----LARKKEEERAELD 306
Query: 392 SLTD--ISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
+L D SWGNQ+R+YVLHPY+MVKDLRT +EV +PD+VL+GD+DGF+
Sbjct: 307 ALKDSGSSWGNQMRSYVLHPYQMVKDLRTEHEVGNPDAVLDGDIDGFL 354
>gi|437999915|ref|YP_007183648.1| peptide chain release factor 2 [Candidatus Kinetoplastibacterium
blastocrithidii (ex Strigomonas culicis)]
gi|429339149|gb|AFZ83571.1| peptide chain release factor 2 [Candidatus Kinetoplastibacterium
blastocrithidii (ex Strigomonas culicis)]
Length = 332
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 149/327 (45%), Positives = 215/327 (65%), Gaps = 4/327 (1%)
Query: 112 LNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDT 171
+++++ EL P LWD+ A ++RE L + ++ E+ + ID+ ++ +ND
Sbjct: 1 MHIINTELEDPKLWDNVSCAQNLNREKKYLEEIINTLEFLHNEINDSIDLFYISEIDNDF 60
Query: 172 ELELESLEALLTM-RRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
+ + SLE + + K KE E + + D +C++++Q+GAGGTE+ DWASM+L+ Y
Sbjct: 61 KT-IRSLENNMDLFYSKIKEMEFCRMFVNKTDKLNCFLDIQSGAGGTEAQDWASMLLRQY 119
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
+A+R+G+ ++ E GEIAGIK +TI++ GEYAFGY + E GVHRLVR SPF+S
Sbjct: 120 LRYAERKGFSSEIITESTGEIAGIKSSTIRIIGEYAFGYFRTETGVHRLVRKSPFNSSGG 179
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSFA++ V P D S + IN +DLRI+ +R+ GAGGQH N TDSAVRI H TGI
Sbjct: 180 RHTSFASIFVYPEI-DDSFDILINPNDLRIDTYRASGAGGQHINKTDSAVRITHNSTGIV 238
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQ++RSQH+NKA AM +L+S++ LE+ + + S TD+ WGNQIR+YVL
Sbjct: 239 VQCQSDRSQHRNKAEAMQMLKSKLYDLEMRNRMAEQKKLEDSKTDVGWGNQIRSYVLDKS 298
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFI 437
R +KDLRTN EVS+ +L+GDLD FI
Sbjct: 299 R-IKDLRTNVEVSNVQKILDGDLDVFI 324
>gi|119505213|ref|ZP_01627288.1| tRNA pseudouridine synthase D, TruD [marine gamma proteobacterium
HTCC2080]
gi|119458904|gb|EAW40004.1| tRNA pseudouridine synthase D, TruD [marine gamma proteobacterium
HTCC2080]
Length = 347
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 144/335 (42%), Positives = 216/335 (64%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL + EL +P++WD+P A + +E SL +K + ++ + D++++A E+D
Sbjct: 15 RLAEVELELAEPSVWDEPERAQALGKERASLELVVKTIDDLDRGSTDSHDLLEMAVAEDD 74
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
+ + + ++ E + SGE+DP + Y++VQ+G+GGTE+ DW M+L+MY
Sbjct: 75 IDTADMVASDTSDLIAQLEKLEFRRMFSGEMDPNNAYLDVQSGSGGTEAQDWTEMLLRMY 134
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
W + +G++ +++ GE+AG+K AT++ +GEYAFG+ + E GVHRLVR SPFDSG R
Sbjct: 135 LRWGESKGFKARVVEASAGEVAGLKSATVQFEGEYAFGWLRTETGVHRLVRKSPFDSGGR 194
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSFA++ V P D + + IN +DLR++ +RS GAGGQH NTTDSAVRI H PT
Sbjct: 195 RHTSFASIFVSPEI-DDNIEIDINPADLRVDTYRSSGAGGQHVNTTDSAVRITHEPTNTV 253
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
+CQ ERSQHQNK +AM L++++ +LE+ +++ S DI WG+QIR+YVL
Sbjct: 254 VSCQTERSQHQNKDNAMKQLRAKLYELEVLKRSADKQALEDSKADIGWGSQIRSYVLDDA 313
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E + +VL+GDLD FI + L L
Sbjct: 314 R-IKDLRTQVETRNTQAVLDGDLDKFIEASLKKGL 347
>gi|395237481|ref|ZP_10415549.1| peptide chain release factor 2 [Turicella otitidis ATCC 51513]
gi|394487252|emb|CCI83637.1| peptide chain release factor 2 [Turicella otitidis ATCC 51513]
Length = 369
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 156/349 (44%), Positives = 222/349 (63%), Gaps = 11/349 (3%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
+A+++ I++ + + L R+ L P LWDDP HA +++ E + K++ +K
Sbjct: 12 VAKTLDGIEQVMDPERLAERVRELEETAADPELWDDPPHAQQVTTELSATQAKLRRLKEL 71
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
Q + + + LA EE + E E L++L R E+ LLSGE D I ++
Sbjct: 72 RQRVDDLPVIADLAEEEGEPETFTEELDSL---RAAVDRLEVTTLLSGEYDEREAVITIR 128
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
+GAGG ++ DWA M+++MY WA+R ++V + D E AGIK AT V GEY +G
Sbjct: 129 SGAGGVDAADWAEMLMRMYTRWAERHDHQVEVFDVSYAEEAGIKSATFVVHGEYMYGELS 188
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
E G HRLVR+SPFD+ RR TSFA V V+P + + H+ I ES++R++ +RS G GGQ
Sbjct: 189 VEQGAHRLVRLSPFDNQNRRQTSFAEVEVLPVV-EQTDHIDIPESEIRVDVYRSSGPGGQ 247
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ---AQMNAE 388
NTTDSAVR+ H+PTGI TCQNE+SQ QN+ASA+ VLQ+++ LE RQ A+++A
Sbjct: 248 SVNTTDSAVRMTHLPTGIVVTCQNEKSQIQNRASALKVLQAKL--LERKRQEERAELDA- 304
Query: 389 HTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
+ + SWGNQ+R+YVLHPY+MVKDLRT EV+DPD VL GD+D F+
Sbjct: 305 -LGAGGNASWGNQMRSYVLHPYQMVKDLRTGVEVNDPDRVLGGDIDRFL 352
>gi|415683581|ref|ZP_11448797.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CGS00]
gi|418565434|ref|ZP_13129838.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21264]
gi|418595814|ref|ZP_13159409.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21342]
gi|418601772|ref|ZP_13165188.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21345]
gi|315194373|gb|EFU24765.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
CGS00]
gi|371973363|gb|EHO90713.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21264]
gi|374397583|gb|EHQ68792.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21345]
gi|374400422|gb|EHQ71536.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21342]
Length = 330
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 143/330 (43%), Positives = 211/330 (63%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
+ +PN WD+ A I ++ +L + K + E+ + L +EE D E++ +
Sbjct: 1 MAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDGEMKEDLE 60
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
+ ++ + K E EL LL G D + +E+ GAGGTES DWA+M+ +MY+ + +++G
Sbjct: 61 QEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKG 120
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
++V +D +PG+ AGIK T+ + G A+GY KAE GVHRLVRISPFDS RRHTSFA+
Sbjct: 121 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASC 180
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
VIP+ + ++IN D+ ++ FR+ GAGGQH N T+SA+RI H P+GI QNERS
Sbjct: 181 DVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERS 240
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
Q +N+ +AM +L+S++ QL++ QA+ AE +I WG+QIR+YV HPY MVKD RT
Sbjct: 241 QIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRT 300
Query: 419 NYEVSDPDSVLEGDLDGFILSYLSASLDKD 448
N E D+V++GD+ FI SYL ++ D
Sbjct: 301 NEETGKVDAVMDGDIGPFIESYLRQTMSHD 330
>gi|433676518|ref|ZP_20508618.1| peptide chain release factor 2 [Xanthomonas translucens pv.
translucens DSM 18974]
gi|430818380|emb|CCP38921.1| peptide chain release factor 2 [Xanthomonas translucens pv.
translucens DSM 18974]
Length = 364
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 150/338 (44%), Positives = 221/338 (65%), Gaps = 6/338 (1%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
RL ++ EL P++W+DP A + RE +L + + + L E ++ ++LA E+D
Sbjct: 23 RLEEVTRELENPDIWNDPERAQSLGRERANLEKTVGGIASVLDGLNEALEFLELAESEDD 82
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
+ L + + + ++ E + SG++D + ++++QAGAGGTE+ DWA ++L+MY
Sbjct: 83 EDTALAVVADVERFQVHVEKLEFQRMFSGQMDASNAFVDIQAGAGGTEAQDWAEILLRMY 142
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
W + RG++ LM+ GE+AGIK AT++V+G++A+G+ K E GVHRLVR SPFDS R
Sbjct: 143 LRWCESRGWKTELMEVSGGEVAGIKSATLRVEGDFAYGWLKTETGVHRLVRKSPFDSDNR 202
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSF +V V P D + ++IN +DLR + +RS GAGGQH N T+SAVRI HIPT I
Sbjct: 203 RHTSFTSVFVSPEV-DDNIDIEINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNIV 261
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEI-ARQAQMNA-EHTQSLTDISWGNQIRTYVLH 408
CQ RSQHQN+ +AM +L +++ +LEI R A+ +A E T+S DI WG+QIR YVL
Sbjct: 262 VACQTGRSQHQNRDNAMKMLAAKLYELEIQKRNAERDAVEATKS--DIGWGSQIRNYVLD 319
Query: 409 PYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLD 446
R +KDLRT E +D VL+GDLD F+ + L + L+
Sbjct: 320 QSR-IKDLRTGIERTDTQKVLDGDLDEFVEASLKSGLE 356
>gi|239816762|ref|YP_002945672.1| hypothetical protein Vapar_3791 [Variovorax paradoxus S110]
gi|259585247|sp|C5CUX0.1|RF2_VARPS RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|239803339|gb|ACS20406.1| conserved hypothetical protein [Variovorax paradoxus S110]
Length = 367
Score = 291 bits (744), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 148/343 (43%), Positives = 216/343 (62%), Gaps = 2/343 (0%)
Query: 99 IKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEH 158
+++ L + RL ++A L PN+W+DP A + RE SL + + L ++
Sbjct: 23 LRRYLDYDAKAERLRTVNASLEDPNVWNDPKKAQELGREKKSLDDVVVTLDRLTSGLSDN 82
Query: 159 IDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTE 218
++ ++++E+ D + + + K+ E + + DP + ++++QAGAGGTE
Sbjct: 83 TELYEMSKEDGDMDGLQSIADDAAALETDIKQLEFRRMFNNPADPLNAFVDIQAGAGGTE 142
Query: 219 SMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHR 278
+ DWASM+L+ Y +A+R+G++ + DE PG+ AGIK ATIKV+G+YAFG + E GVHR
Sbjct: 143 ACDWASMLLRQYLKYAERKGFKTQIEDETPGDTAGIKGATIKVEGDYAFGLLRTETGVHR 202
Query: 279 LVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDS 338
LVR SPFDS RHTSFA++ V P D S ++IN +D+R + FR+ GAGGQH N TDS
Sbjct: 203 LVRKSPFDSSGGRHTSFASIFVYPEI-DDSIEIEINPADVRTDTFRASGAGGQHINKTDS 261
Query: 339 AVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISW 398
AVR+ HIPTGI CQ+ RSQH N+ A L+SR+ E+ ++ + + S TD+ W
Sbjct: 262 AVRLTHIPTGIVVQCQDGRSQHSNRDVAWKRLRSRLYDHEMRKRQEEQQKLEDSKTDVGW 321
Query: 399 GNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
G+QIR+YVL R +KDLRTN EVS VL+GDLD FI + L
Sbjct: 322 GHQIRSYVLDNSR-IKDLRTNVEVSATQKVLDGDLDVFIEASL 363
>gi|257424874|ref|ZP_05601301.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
55/2053]
gi|257427542|ref|ZP_05603941.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
65-1322]
gi|257430173|ref|ZP_05606557.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
68-397]
gi|257432874|ref|ZP_05609234.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
E1410]
gi|257435778|ref|ZP_05611826.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
M876]
gi|282913594|ref|ZP_06321383.1| peptide chain release factor 2, programmed [Staphylococcus aureus
subsp. aureus M899]
gi|282918547|ref|ZP_06326284.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
C427]
gi|282923513|ref|ZP_06331193.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
C101]
gi|283957586|ref|ZP_06375039.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
A017934/97]
gi|293500640|ref|ZP_06666491.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
58-424]
gi|293509587|ref|ZP_06668298.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
M809]
gi|293524173|ref|ZP_06670860.1| peptide chain release factor 2, programmed [Staphylococcus aureus
subsp. aureus M1015]
gi|297590314|ref|ZP_06948953.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
aureus MN8]
gi|384868314|ref|YP_005748510.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
aureus TCH60]
gi|417887266|ref|ZP_12531399.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21195]
gi|257272444|gb|EEV04567.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
55/2053]
gi|257275735|gb|EEV07208.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
65-1322]
gi|257279370|gb|EEV09971.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
68-397]
gi|257282289|gb|EEV12424.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
E1410]
gi|257284969|gb|EEV15088.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
M876]
gi|282314381|gb|EFB44771.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
C101]
gi|282317681|gb|EFB48053.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
C427]
gi|282322626|gb|EFB52948.1| peptide chain release factor 2, programmed [Staphylococcus aureus
subsp. aureus M899]
gi|283791037|gb|EFC29852.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
A017934/97]
gi|290921136|gb|EFD98197.1| peptide chain release factor 2, programmed [Staphylococcus aureus
subsp. aureus M1015]
gi|291095645|gb|EFE25906.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
58-424]
gi|291467684|gb|EFF10199.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
M809]
gi|297576613|gb|EFH95328.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
aureus MN8]
gi|312438819|gb|ADQ77890.1| peptide chain release factor RF2 [Staphylococcus aureus subsp.
aureus TCH60]
gi|341858319|gb|EGS99116.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21195]
Length = 331
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 143/330 (43%), Positives = 211/330 (63%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
+ +PN WD+ A I ++ +L + K + E+ + L +EE D E++ +
Sbjct: 2 MAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDGEMKEDLE 61
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
+ ++ + K E EL LL G D + +E+ GAGGTES DWA+M+ +MY+ + +++G
Sbjct: 62 QEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKG 121
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
++V +D +PG+ AGIK T+ + G A+GY KAE GVHRLVRISPFDS RRHTSFA+
Sbjct: 122 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASC 181
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
VIP+ + ++IN D+ ++ FR+ GAGGQH N T+SA+RI H P+GI QNERS
Sbjct: 182 DVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERS 241
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
Q +N+ +AM +L+S++ QL++ QA+ AE +I WG+QIR+YV HPY MVKD RT
Sbjct: 242 QIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRT 301
Query: 419 NYEVSDPDSVLEGDLDGFILSYLSASLDKD 448
N E D+V++GD+ FI SYL ++ D
Sbjct: 302 NEETGKVDAVMDGDIGPFIESYLRQTMSHD 331
>gi|433447236|ref|ZP_20410869.1| peptide chain release factor B [Anoxybacillus flavithermus
TNO-09.006]
gi|432000070|gb|ELK20976.1| peptide chain release factor B [Anoxybacillus flavithermus
TNO-09.006]
Length = 329
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 146/324 (45%), Positives = 211/324 (65%), Gaps = 3/324 (0%)
Query: 123 NLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMI-KLAREENDTELELESLEAL 181
+ WDD A + E +L + E ++ E E E++++ +L +EE D EL+ E +
Sbjct: 5 DFWDDQKAAQAVISEANALKDLVGEFRSLE-ERFENLEVTYELVKEEPDEELQKELVAEA 63
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
+ + E EL LL+ D + +E+ GAGGTES DWASM+L+MY WA+++GY+V
Sbjct: 64 KKLSKDFSEFELQLLLNEPYDKNNAILELHPGAGGTESQDWASMLLRMYTRWAEKKGYKV 123
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
+D +PGE AGIK T+ + G A+GY KAE GVHRLVRISPFD+ RRHTSF + V+
Sbjct: 124 ETLDYLPGEEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDASGRRHTSFVSCEVV 183
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D + + + +++++ +RS GAGGQH NTTDSAVRI HIPTGI TCQ+ERSQ +
Sbjct: 184 PEF-DDNIEIDVRPDEIKVDTYRSSGAGGQHVNTTDSAVRITHIPTGIVVTCQSERSQIK 242
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
N+ AM +L++++ Q ++ Q AE +I WG+QIR+YV HPY +VKD RTN E
Sbjct: 243 NREKAMNMLKAKLYQKKLEEQQAELAEIRGEQKEIGWGSQIRSYVFHPYSLVKDHRTNTE 302
Query: 422 VSDPDSVLEGDLDGFILSYLSASL 445
V + +V++G++D FI +YL + L
Sbjct: 303 VGNVQAVMDGEIDVFIDAYLRSKL 326
>gi|291459037|ref|ZP_06598427.1| peptide chain release factor 2 [Oribacterium sp. oral taxon 078
str. F0262]
gi|291418291|gb|EFE92010.1| peptide chain release factor 2 [Oribacterium sp. oral taxon 078
str. F0262]
Length = 378
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 149/357 (41%), Positives = 219/357 (61%), Gaps = 1/357 (0%)
Query: 85 WKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGK 144
+K + A+ ++ + L +N R+ L + +P+ W DP A R+S E+ L +
Sbjct: 7 FKYELSTKAEPLEHLGASLDLENKRKRILELDRMMEEPDFWTDPERANRLSTENHHLKNE 66
Query: 145 MKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPC 204
++ ++ +Q + +I++ EE D + E E L K LLSGE D
Sbjct: 67 LESYQSLKQSYDDIGALIEMGVEEGDESVIPEIRELLSEFSEKLDSMSTQLLLSGEYDAM 126
Query: 205 SCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGE 264
+ + + AGAGGTE+ DWA M+ +MY WA+RRG+ + ++D + GE AGIK T+++DG+
Sbjct: 127 NAILRLNAGAGGTEANDWAGMLYRMYTRWAERRGFGIKILDYLEGEEAGIKSVTMEIDGD 186
Query: 265 YAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFR 324
YA+GY ++E G+HRLVRISPF++ +R TSF + V+P+ ++ V I E D+++E FR
Sbjct: 187 YAYGYLRSESGIHRLVRISPFNAQGKRQTSFVSCDVMPDI-ETDIDVDIREEDIKMEVFR 245
Query: 325 SGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQ 384
S GAGGQH N T SAVR+IHIPTG CQ ERSQ QN+ AM +L++++ E Q
Sbjct: 246 SSGAGGQHINKTSSAVRLIHIPTGFVVACQEERSQLQNRQKAMQMLKAKLYIKEKEEQEA 305
Query: 385 MNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
A + D WG+QIR+YVL PYRMVKDLRT E + D+VL+GD+D FI +YL
Sbjct: 306 KLAGIRGEVKDNGWGSQIRSYVLQPYRMVKDLRTGEETGNTDAVLDGDIDRFITAYL 362
>gi|54307774|ref|YP_128794.1| peptide chain release factor 2 [Photobacterium profundum SS9]
gi|46912197|emb|CAG18992.1| putative peptide chain release factor 2 [Photobacterium profundum
SS9]
Length = 353
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 146/335 (43%), Positives = 217/335 (64%), Gaps = 2/335 (0%)
Query: 111 RLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREEND 170
+L ++AEL +P +W++P A + + +L ++ + + + + +++LA EE+D
Sbjct: 21 QLEEVNAELEQPAVWNEPERAQALGKSRAALEAVVETIDQLDLGVEDVAGLLELAVEEDD 80
Query: 171 TELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMY 230
E E L + K + E + SGE D CYI++QAG+GGTE+ DW SM+L+MY
Sbjct: 81 QETFDEIEPELAELEAKLAKLEFRRMFSGEYDSSDCYIDLQAGSGGTEAQDWTSMMLRMY 140
Query: 231 KSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKR 290
WA +G++ +++ G++AG+K ATI++ GEYA+G+ + E GVHRLVR SPFDSG R
Sbjct: 141 LRWADAKGFKTEIIEVSAGDVAGLKSATIRLVGEYAYGWLRTETGVHRLVRKSPFDSGGR 200
Query: 291 RHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGIT 350
RHTSFA+ V P D+ + IN SDLRI+ +R+ GAGGQH NTT+SAVRI H+PT I
Sbjct: 201 RHTSFASAFVYPEIDDNIV-IDINPSDLRIDVYRASGAGGQHVNTTESAVRITHVPTNIV 259
Query: 351 ATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPY 410
CQN+RSQH+NK AM L++++ + E+ ++ + S +DI WG+QIR+YVL
Sbjct: 260 VQCQNDRSQHKNKDQAMKQLKAKLFEFEMQKKNAEKQANEDSKSDIGWGSQIRSYVLDDS 319
Query: 411 RMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
R +KDLRT E + +VL+GDLD FI + L + L
Sbjct: 320 R-IKDLRTGVENRNTQAVLDGDLDRFIEASLKSGL 353
>gi|118473158|ref|YP_886446.1| peptide chain release factor 2 [Mycobacterium smegmatis str. MC2
155]
gi|399986457|ref|YP_006566806.1| peptide chain release factor 2 [Mycobacterium smegmatis str. MC2
155]
gi|166225108|sp|A0QU58.1|RF2_MYCS2 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|118174445|gb|ABK75341.1| peptide chain release factor 2 [Mycobacterium smegmatis str. MC2
155]
gi|399231018|gb|AFP38511.1| Peptide chain release factor 2 [Mycobacterium smegmatis str. MC2
155]
Length = 368
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 150/355 (42%), Positives = 222/355 (62%), Gaps = 4/355 (1%)
Query: 84 DWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
D ++ AA+ ++ +++ L L R+ L + + PNLWDD A +++ +
Sbjct: 4 DRQADIAALDTTLTTVERVLDVDGLRNRIEQLEKDASDPNLWDDQTRAQKVTSDLSHAQN 63
Query: 144 KMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDP 203
+++ V+ Q L + + +LA E + E+ L +R + E+ LLSGE D
Sbjct: 64 ELRRVEGLRQRLDDLPVLYELAAEAGGPDEVAEADAELAKLREDIEAMEVRTLLSGEYDE 123
Query: 204 CSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDG 263
+ +++GAGG ++ DWA M+++MY WA++ Y V + D E AGIK AT V
Sbjct: 124 REAVVTIRSGAGGVDAADWAEMLMRMYIRWAEKHDYPVEIFDTSYAEEAGIKSATFAVHA 183
Query: 264 EYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERF 323
+A+G E G HRLVRISPFD+ RR TSFA V V+P +++ H++I E+D+R++ +
Sbjct: 184 PFAYGTLSVEQGTHRLVRISPFDNQSRRQTSFADVEVLPVV-ETTDHIEIPENDIRVDVY 242
Query: 324 RSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSR-VNQLEIARQ 382
RS G GGQ NTTDSAVR+ HIPTGI TCQNE+SQ QNK SAM VLQ++ + + + +
Sbjct: 243 RSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQAKLLERKRLEER 302
Query: 383 AQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
A+++A + SWGNQ+R+YVLHPY+MVKDLRT YEV +P SVL+GD+DGF+
Sbjct: 303 AELDALKGDGGS--SWGNQMRSYVLHPYQMVKDLRTEYEVGNPASVLDGDIDGFL 355
>gi|49475632|ref|YP_033673.1| peptide chain release factor 2 [Bartonella henselae str. Houston-1]
gi|49238439|emb|CAF27667.1| Peptide chain release factor 2 [Bartonella henselae str. Houston-1]
Length = 322
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 148/307 (48%), Positives = 211/307 (68%), Gaps = 1/307 (0%)
Query: 136 REHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDA 195
RE L + +++F + L E I++I + EE+D E+ ++ ++ ++ + ++++DA
Sbjct: 3 RERQRLDDSINGIRSFTKTLEECIELIAMGEEESDIEIITDAENSIRNLKSEIDKRQIDA 62
Query: 196 LLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIK 255
LLSGE D Y+EV AGAGGTES DWASM+L+MY WA++ +V +++ GE AGIK
Sbjct: 63 LLSGEADQNDTYLEVHAGAGGTESQDWASMLLRMYMRWAEQHKMKVEILEIHDGEEAGIK 122
Query: 256 RATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINE 315
AT+ V G A+G K E GVHRLVRISPFDS +RHTSFA++ V P D + V ++E
Sbjct: 123 SATLLVKGHNAYGMLKTESGVHRLVRISPFDSNAKRHTSFASIWVYP-VIDDNIEVDVSE 181
Query: 316 SDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVN 375
+D+RI+ +R+ GAGGQH NTTDSAVRI HI TGI CQ ERSQH+N+A A +L++R+
Sbjct: 182 ADVRIDTYRASGAGGQHVNTTDSAVRITHIKTGIVVQCQTERSQHKNRAIAWSMLRARLY 241
Query: 376 QLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDG 435
+ E+ ++ + S T+I WG+QIR+YVL PY++VKDLRT E +DP SVL G+LD
Sbjct: 242 EEELKKREEETNAVEASKTEIGWGHQIRSYVLQPYQLVKDLRTGVENTDPQSVLNGNLDS 301
Query: 436 FILSYLS 442
FI + L+
Sbjct: 302 FIEAALA 308
>gi|282908140|ref|ZP_06315971.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
aureus subsp. aureus WW2703/97]
gi|282910399|ref|ZP_06318203.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
aureus subsp. aureus WBG10049]
gi|282325791|gb|EFB56099.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
aureus subsp. aureus WBG10049]
gi|282327805|gb|EFB58087.1| LOW QUALITY PROTEIN: peptide chain release factor 2 [Staphylococcus
aureus subsp. aureus WW2703/97]
Length = 352
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 143/330 (43%), Positives = 211/330 (63%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
+ +PN WD+ A I ++ +L + K + E+ + L +EE D E++ +
Sbjct: 23 MAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDGEMKEDLE 82
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
+ ++ + K E EL LL G D + +E+ GAGGTES DWA+M+ +MY+ + +++G
Sbjct: 83 QEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKG 142
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
++V +D +PG+ AGIK T+ + G A+GY KAE GVHRLVRISPFDS RRHTSFA+
Sbjct: 143 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASC 202
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
VIP+ + ++IN D+ ++ FR+ GAGGQH N T+SA+RI H P+GI QNERS
Sbjct: 203 DVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERS 262
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
Q +N+ +AM +L+S++ QL++ QA+ AE +I WG+QIR+YV HPY MVKD RT
Sbjct: 263 QIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRT 322
Query: 419 NYEVSDPDSVLEGDLDGFILSYLSASLDKD 448
N E D+V++GD+ FI SYL ++ D
Sbjct: 323 NEETGKVDAVMDGDIGPFIESYLRQTMSHD 352
>gi|417798692|ref|ZP_12445852.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21310]
gi|421149526|ref|ZP_15609184.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
str. Newbould 305]
gi|334275553|gb|EGL93842.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21310]
gi|394330443|gb|EJE56535.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
str. Newbould 305]
Length = 331
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 143/330 (43%), Positives = 211/330 (63%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
+ +PN WD+ A I ++ +L + K + E+ + L +EE D E++ +
Sbjct: 2 MAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQAEVDDMDATWDLLQEEFDEEMKEDLE 61
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
+ ++ + K E EL LL G D + +E+ GAGGTES DWA+M+ +MY+ + +++G
Sbjct: 62 QEVIYFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKG 121
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
++V +D +PG+ AGIK T+ + G A+GY KAE GVHRLVRISPFDS RRHTSFA+
Sbjct: 122 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASC 181
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
VIP+ + ++IN D+ ++ FR+ GAGGQH N T+SA+RI H P+GI QNERS
Sbjct: 182 DVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERS 241
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
Q +N+ +AM +L+S++ QL++ QA+ AE +I WG+QIR+YV HPY MVKD RT
Sbjct: 242 QIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRT 301
Query: 419 NYEVSDPDSVLEGDLDGFILSYLSASLDKD 448
N E D+V++GD+ FI SYL ++ D
Sbjct: 302 NEETGKVDAVMDGDIGPFIESYLRQTMSHD 331
>gi|417896571|ref|ZP_12540517.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21235]
gi|341840537|gb|EGS82040.1| peptide chain release factor 2 [Staphylococcus aureus subsp. aureus
21235]
Length = 331
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 143/330 (43%), Positives = 211/330 (63%)
Query: 119 LNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESL 178
+ +PN WD+ A I ++ +L + K + E+ + L +EE D E++ +
Sbjct: 2 MAEPNFWDNQTKAQDIIDKNNALKAIVNGYKTLQVEVDDMDATWDLLQEEFDEEMKEDLE 61
Query: 179 EALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRG 238
+ ++ + K E EL LL G D + +E+ GAGGTES DWA+M+ +MY+ + +++G
Sbjct: 62 QEVINFKAKVDEYELQLLLDGPHDANNAILELHPGAGGTESQDWANMLFRMYQRYCEKKG 121
Query: 239 YRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAV 298
++V +D +PG+ AGIK T+ + G A+GY KAE GVHRLVRISPFDS RRHTSFA+
Sbjct: 122 FKVETVDYLPGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFASC 181
Query: 299 AVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERS 358
VIP+ + ++IN D+ ++ FR+ GAGGQH N T+SA+RI H P+GI QNERS
Sbjct: 182 DVIPDFNNDEIEIEINPDDITVDTFRASGAGGQHINKTESAIRITHHPSGIVVNNQNERS 241
Query: 359 QHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRT 418
Q +N+ +AM +L+S++ QL++ QA+ AE +I WG+QIR+YV HPY MVKD RT
Sbjct: 242 QIKNREAAMKMLKSKLYQLKLEEQAREMAEIRGEQKEIGWGSQIRSYVFHPYSMVKDHRT 301
Query: 419 NYEVSDPDSVLEGDLDGFILSYLSASLDKD 448
N E D+V++GD+ FI SYL ++ D
Sbjct: 302 NEETGKVDAVMDGDIGPFIESYLRQTMSHD 331
>gi|46908681|ref|YP_015070.1| peptide chain release factor 2 [Listeria monocytogenes serotype 4b
str. F2365]
gi|67461157|sp|Q71WR9.1|RF2_LISMF RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|46881953|gb|AAT05247.1| peptide chain release factor 2, programmed frameshift [Listeria
monocytogenes serotype 4b str. F2365]
Length = 366
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 150/353 (42%), Positives = 219/353 (62%), Gaps = 1/353 (0%)
Query: 93 AQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFE 152
AQ I+ + L ++ VR+ L ++ PN W+D A ++ E + A E
Sbjct: 14 AQQIKDFRGSLDLDSMEVRIAELEDQMLDPNFWNDQQAAQKVINESNGYKETYQAFHALE 73
Query: 153 QELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQA 212
+E ++L +EE D +L+ E + + E EL +LS D + +E+
Sbjct: 74 EEQESMEISLELLKEEADEDLQEELEKDIKAYMATISEFELKLMLSDPYDKNNAILELHP 133
Query: 213 GAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKA 272
GAGGTES DW SM+L+MY+ W++++G++V ++D G+ AGIK T+ + G A+GY KA
Sbjct: 134 GAGGTESQDWGSMLLRMYQRWSEKKGFKVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKA 193
Query: 273 EVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQH 332
E GVHRLVRISPFDS RRHTSF +V V+P D +++ DL+I+ +R+ GAGGQH
Sbjct: 194 EKGVHRLVRISPFDSSGRRHTSFVSVDVMPEL-DDDIEIEVRTEDLKIDTYRATGAGGQH 252
Query: 333 ANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQS 392
NTTDSAVR+ HIP+GI TCQ+ERSQ +N+ AM +L++++ Q E + + AE
Sbjct: 253 INTTDSAVRMTHIPSGIVVTCQSERSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGE 312
Query: 393 LTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+I WG+QIR+YV HPY MVKD RTNYE + +V++GDLD FI +YL + +
Sbjct: 313 QKEIGWGSQIRSYVFHPYSMVKDHRTNYETGNIQAVMDGDLDEFINAYLRSRI 365
>gi|170076819|ref|YP_001733457.1| peptide chain release factor 2 [Synechococcus sp. PCC 7002]
gi|169884488|gb|ACA98201.1| peptide chain release factor 2 [Synechococcus sp. PCC 7002]
Length = 359
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 146/343 (42%), Positives = 216/343 (62%), Gaps = 4/343 (1%)
Query: 106 KNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLA 165
K L+ ++ L + +P W+D A I +E L G + + + ++ + + + +L
Sbjct: 16 KTLDAKIFDLEQQAAQPEFWEDQQGAQDILQELTELKGTVAQYQQWQGQFEDAAAIAELL 75
Query: 166 REENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASM 225
E D L E++E L ++++ EL +LSGE D + + AGAGGT++ DWA M
Sbjct: 76 TEAEDPALLTEAMENLDDLQKELNRWELQQMLSGEYDNLGAVLTINAGAGGTDAQDWAEM 135
Query: 226 VLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPF 285
+L+MY W++++GY+V L + G+ AG+K AT++V G YAFGY K E G HRLVRISPF
Sbjct: 136 LLRMYTRWSEKQGYKVRLAEISEGDEAGLKSATLEVTGRYAFGYLKHEKGTHRLVRISPF 195
Query: 286 DSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHI 345
++ +R TSFA V V+P GD++ V I E DL I R+GG GGQ+ N ++AVRI+H+
Sbjct: 196 NANGKRQTSFAGVEVMPILGDNAVKVDIPEKDLEITTSRAGGKGGQNVNKVETAVRIVHL 255
Query: 346 PTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTY 405
PTG+ C ERSQ QNK A+ +L++++ + ++AQ AE + + +WGNQIR Y
Sbjct: 256 PTGVAVRCTQERSQLQNKEKALAILKAKLLIIAQEQRAQEIAEIRGDMVEAAWGNQIRNY 315
Query: 406 VLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKD 448
V HPY+MVKDLRTN+E +D D V++GDLD FI ASL +D
Sbjct: 316 VFHPYQMVKDLRTNHETTDVDGVMDGDLDAFI----EASLRQD 354
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.131 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,043,220,730
Number of Sequences: 23463169
Number of extensions: 280805065
Number of successful extensions: 784227
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8471
Number of HSP's successfully gapped in prelim test: 73
Number of HSP's that attempted gapping in prelim test: 762418
Number of HSP's gapped (non-prelim): 8788
length of query: 453
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 307
effective length of database: 8,933,572,693
effective search space: 2742606816751
effective search space used: 2742606816751
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 79 (35.0 bits)