BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012936
(453 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q1GIB5|RF2_RUEST Peptide chain release factor 2 OS=Ruegeria sp. (strain TM1040)
GN=prfB PE=3 SV=1
Length = 374
Score = 342 bits (877), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 170/354 (48%), Positives = 242/354 (68%), Gaps = 5/354 (1%)
Query: 90 AAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVK 149
A I +S+ ++ +R+ W+ RL +A + PNLWDDP A ++ R+ SL+ M K
Sbjct: 10 ADIEKSLDLLAQRMNWETAEFRLEEFNARVEDPNLWDDPAAAQKLMRDRQSLVDAMDTYK 69
Query: 150 AFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIE 209
+ Q+L + +++I+L E D E+ ++ + L ++ K+ +KEL+ALL GE DP ++E
Sbjct: 70 SIRQDLQDSVELIELGEMEEDAEVVKDAEDTLKALKEKAAQKELEALLDGETDPNDAFLE 129
Query: 210 VQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGY 269
++AGAGGTE+ DWASM+ +MY WA+ RG+ V L +E G AGIK AT ++ G A+G+
Sbjct: 130 IKAGAGGTEACDWASMLARMYVRWAESRGFSVELQEEQAGAEAGIKSATYQIKGHNAYGW 189
Query: 270 AKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAG 329
K+E G HRLVRISPF G R TSFAAV P D + +++N +D+RI+ +RS GAG
Sbjct: 190 LKSESGTHRLVRISPFGKGT-RETSFAAVGAYPVI-DDNIEIEVNPADIRIDTYRSSGAG 247
Query: 330 GQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ-AQMNAE 388
GQH NTTDSAVRI H PTGI T +E+SQHQN+ AM L+SR+ QLE+ R+ A++NA
Sbjct: 248 GQHVNTTDSAVRITHEPTGIVVTS-SEKSQHQNRDIAMKALKSRLYQLELDRRNAEVNAL 306
Query: 389 HTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
H ++ D WGNQIR+YV+ PY+MVKDLRTN+E +D VL+GDLDGF+ + L+
Sbjct: 307 H-EAKGDAGWGNQIRSYVMQPYQMVKDLRTNHETADTKGVLDGDLDGFMAATLA 359
>sp|Q2W3F8|RF2_MAGSA Peptide chain release factor 2 OS=Magnetospirillum magneticum
(strain AMB-1 / ATCC 700264) GN=prfB PE=3 SV=1
Length = 371
Score = 339 bits (869), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 174/358 (48%), Positives = 240/358 (67%), Gaps = 3/358 (0%)
Query: 89 AAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEV 148
A I +S ++K+ L W +RL+ L+A P+LW+D A +I RE L ++
Sbjct: 9 AQDIRRSAALLKRHLNWDEALMRLDELNASAENPDLWNDAGAAQKIMRERNELDSAIQGC 68
Query: 149 KAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYI 208
+A E+EL + ++I+L E D + ++ E + ++ ++ + EL+ LLSGE D CY+
Sbjct: 69 RALERELADLAELIELGEMEGDQTVIDDAEEQVRALKERAAKMELETLLSGEADHNDCYM 128
Query: 209 EVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFG 268
E+ AGAGGTES DWA M+L+MY WA++ GY+V ++E GE AGIK ATI++ G A+G
Sbjct: 129 EINAGAGGTESQDWAEMLLRMYTRWAEKHGYKVEWLEESAGEQAGIKSATIRILGHNAYG 188
Query: 269 YAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGA 328
+ K E GVHRLVRISP+DS RRHTSF++ V P D + +QINES+ RI+ +R+ GA
Sbjct: 189 WLKTESGVHRLVRISPYDSAARRHTSFSSAWVYPVI-DDTIDIQINESECRIDTYRASGA 247
Query: 329 GGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI-ARQAQMNA 387
GGQH N TDSAVRI HIPTGI CQ ERSQHQN+A A +L++R+ + E+ R+A A
Sbjct: 248 GGQHINKTDSAVRITHIPTGIAVACQMERSQHQNRARAWDMLRARLYEAELQKREAAAQA 307
Query: 388 EHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
Q TDI WG+QIR+YVL PY+MVKDLRTN E SD VL+GDLD F+ + L+A +
Sbjct: 308 LEDQK-TDIGWGHQIRSYVLQPYQMVKDLRTNVETSDTQGVLDGDLDMFMAASLAARV 364
>sp|Q165J6|RF2_ROSDO Peptide chain release factor 2 OS=Roseobacter denitrificans (strain
ATCC 33942 / OCh 114) GN=prfB PE=3 SV=1
Length = 374
Score = 336 bits (861), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 171/352 (48%), Positives = 240/352 (68%), Gaps = 4/352 (1%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
I +S+ ++ +RL + RL +A + P LWDDP A ++ RE L+ M +
Sbjct: 12 IQKSLDLLAQRLDVETAPYRLEEFNARVEDPTLWDDPDAAQKLMRERQMLVDAMATHDSI 71
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
+QE+ ++I++I+L E+D ++ ++ AL + + +KEL+ALL GE D ++EV
Sbjct: 72 KQEMADNIELIELGEMEDDADVVSDAENALRALEETAAKKELEALLDGEADSNDTFLEVN 131
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AGAGGTES DWASM+ +MY WA+++GY+V L G+ AGIK AT K+ G A+G+ K
Sbjct: 132 AGAGGTESCDWASMLARMYVRWAEKKGYKVELQSMSDGDEAGIKSATYKITGLNAYGWLK 191
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
+E GVHRLVRISPFDS +RHTSF++V V P D + +++N +D+RI+ +RS GAGGQ
Sbjct: 192 SESGVHRLVRISPFDSAAKRHTSFSSVWVYP-VVDDNIDIEVNPADIRIDTYRSSGAGGQ 250
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQ-AQMNAEHT 390
H NTTDSAVRI H PTGI T +E+SQHQN+ AM L+SR+ QLE+ R+ A +N H
Sbjct: 251 HVNTTDSAVRITHHPTGIVVTS-SEKSQHQNRDIAMKALKSRLYQLELDRRNAAINEAH- 308
Query: 391 QSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
++ D WGNQIR+YVL PY+MVKDLRTN+E SD VL+GDLDGF+ + L+
Sbjct: 309 ENKGDAGWGNQIRSYVLQPYQMVKDLRTNFETSDTKGVLDGDLDGFMAATLA 360
>sp|C5CGS4|RF2_KOSOT Peptide chain release factor 2 OS=Kosmotoga olearia (strain TBF
19.5.1) GN=prfB PE=3 SV=1
Length = 370
Score = 328 bits (841), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 172/355 (48%), Positives = 235/355 (66%), Gaps = 9/355 (2%)
Query: 99 IKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEH 158
IK + + +L+ + EL+ P++W D AG++ ++ +L ++ + QEL E+
Sbjct: 20 IKTTVDVDKIKEKLSRIEKELSDPSVWSDQRRAGKLGQQAQALRSQLDLLNKV-QELFEN 78
Query: 159 IDM-IKLAREENDTELELESLEALLT-MRRKSKEKELDALLSGELDPCSCYIEVQAGAGG 216
ID+ ++L+ E+ E LE+L LL KE EL+ LLS D + Y+ V GAGG
Sbjct: 79 IDIAVELSEED---ESYLENLNELLKEAEDMVKEFELNILLSSPYDAYNAYLSVHPGAGG 135
Query: 217 TESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGV 276
TES DWASM+L+MY WA+R Y+VT ++E PGE AGIK ATI + G YA+G K E GV
Sbjct: 136 TESQDWASMLLRMYIRWAERNNYKVTTIEEQPGEEAGIKSATINIAGPYAYGKLKYEAGV 195
Query: 277 HRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTT 336
HRLVRISPFD+ RRHTSFA+V+V P D + I DL+I+ +R+GGAGGQH N T
Sbjct: 196 HRLVRISPFDANHRRHTSFASVSVFPEM-DDDVEIDIRPEDLKIDTYRAGGAGGQHVNRT 254
Query: 337 DSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDI 396
+SAVRI HIPTGI TCQNERSQHQNKA+AM +L++++ +LE+ ++ Q + DI
Sbjct: 255 ESAVRITHIPTGIVVTCQNERSQHQNKATAMKILKAKLFELELEKKRQEKMKLMGEQKDI 314
Query: 397 SWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL--SASLDKDE 449
+WGNQIR+YV PY MVKD RTNYE D +V++G +D FI L AS+D+D+
Sbjct: 315 AWGNQIRSYVFQPYTMVKDHRTNYETGDVQAVMDGYIDDFIEKELLFFASIDEDK 369
>sp|O67695|RF2_AQUAE Peptide chain release factor 2 OS=Aquifex aeolicus (strain VF5)
GN=prfB PE=3 SV=1
Length = 373
Score = 323 bits (827), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 159/363 (43%), Positives = 238/363 (65%), Gaps = 2/363 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
K + + ++ +KK L + L L L ++++PN W+D A ++ + + +
Sbjct: 7 KGKVEELRKRLEDVKKILSPEKLESELKELDQKMSEPNFWEDQEKAKQVIQRRKWVEETL 66
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
++K E+ + + +++++ EE DTE E + + R +E EL LSGE+D +
Sbjct: 67 NKLKNLEKSVKDLEELVEITSEE-DTETWAMMDEEIKEVERTLRELELKTYLSGEMDAKN 125
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
Y+ +QAGAGGTE+ DWA M+ +MYK WA+++GY V L+D P ++AGIK T+ V G Y
Sbjct: 126 AYLTIQAGAGGTEACDWADMLFRMYKRWAEKKGYEVELIDITPDDVAGIKSVTVLVKGPY 185
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
A+GY K E GVHRLVRISPFD+ RRHTSFAAV+V+P D ++I DL+IE FR+
Sbjct: 186 AYGYLKGEQGVHRLVRISPFDANARRHTSFAAVSVMPQI-DEDIKIEIKPEDLKIETFRA 244
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQM 385
GAGGQ+ N TD+AVRI HIPTGIT +CQ ERSQ+QNK A+ +L++++ QLE+ + +
Sbjct: 245 SGAGGQYVNKTDTAVRITHIPTGITVSCQQERSQYQNKRKALELLKAKLYQLEMKKLEEK 304
Query: 386 NAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
++ TDI WG+QIR+YV HPY+++KDLRT YE + ++V++G++D FI SYL
Sbjct: 305 KKQYEGEKTDIGWGHQIRSYVFHPYKLIKDLRTGYETGNVEAVMDGEIDEFIESYLKWKA 364
Query: 446 DKD 448
K+
Sbjct: 365 QKE 367
>sp|Q2L224|RF2_BORA1 Peptide chain release factor 2 OS=Bordetella avium (strain 197N)
GN=prfB PE=3 SV=1
Length = 367
Score = 322 bits (826), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 162/353 (45%), Positives = 239/353 (67%), Gaps = 4/353 (1%)
Query: 90 AAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVK 149
A A+ Q +++ L + RL++++AEL P +W+DP HA + RE SL ++ +
Sbjct: 14 ADYAEREQALRRYLDYDAKTERLHVVNAELEDPAVWNDPKHAQDLGREKKSLEDVVQTLT 73
Query: 150 AFEQELLEHIDMIKLAREENDTELELESLEA-LLTMRRKSKEKELDALLSGELDPCSCYI 208
Q + + +++ +LA + D + LES+E T + + + E + S DP +C++
Sbjct: 74 ELGQGVADALELFELAAADED-DATLESIENDANTFQERLEGLEFRRMFSNPADPLNCFL 132
Query: 209 EVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFG 268
++QAGAGGTE+ DWASM+L+ Y +A+R+G++ +++E GEIAGIK ATIK++GEYAFG
Sbjct: 133 DIQAGAGGTEAQDWASMLLRQYLKYAERKGFKAEVLEESEGEIAGIKSATIKLEGEYAFG 192
Query: 269 YAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGA 328
Y + E GVHRLVR SPFDS RHTSFA+V V P D S V++N +DLR++ +R+ GA
Sbjct: 193 YLRTETGVHRLVRKSPFDSSGGRHTSFASVFVYPEV-DESFEVEVNPADLRVDTYRASGA 251
Query: 329 GGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAE 388
GGQH N TDSAVRI H+P+GI CQN+RSQH+N+A AM +L+S++ +LE+ ++ +
Sbjct: 252 GGQHINKTDSAVRITHMPSGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRKRMAEQQK 311
Query: 389 HTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
S TD+ WG+QIR+YVL R +KDLRTN E+S+ VL+GDLD FI + L
Sbjct: 312 LEDSKTDVGWGHQIRSYVLDQSR-IKDLRTNVEISNTQKVLDGDLDPFIQASL 363
>sp|B4EDB1|RF2_BURCJ Peptide chain release factor 2 OS=Burkholderia cepacia (strain
J2315 / LMG 16656) GN=prfB PE=3 SV=1
Length = 367
Score = 321 bits (822), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 161/347 (46%), Positives = 232/347 (66%), Gaps = 6/347 (1%)
Query: 99 IKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEH 158
++ L + RL ++ EL PN+W+D +A + RE L G + + A + +L +
Sbjct: 23 LRGYLDYDAKAARLTEVNKELEDPNVWNDSKNAQALGREKKLLEGVVTTLTALDSDLRDA 82
Query: 159 IDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTE 218
+D+ +LAREE D + L S E + + + E + S DP +C+I++QAGAGGTE
Sbjct: 83 LDLFELAREEGDEDTLLASEEDAAKLEARVGDIEFRRMFSNPADPNNCFIDIQAGAGGTE 142
Query: 219 SMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHR 278
+ DWASM+L+ Y + +R+G++ +++E G++AGIK AT+KV GEYA+G+ + E G+HR
Sbjct: 143 ACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATVKVTGEYAYGFLRTETGIHR 202
Query: 279 LVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDS 338
LVR SPFDS RHTSF++V V P D S V+IN +DLRI+ +R+ GAGGQH N TDS
Sbjct: 203 LVRKSPFDSSGGRHTSFSSVFVYPEI-DDSIEVEINPADLRIDTYRASGAGGQHINKTDS 261
Query: 339 AVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISW 398
AVRI H+PTGI CQN+RSQH+N+A AM +L+SR+ ++E+ ++ + S TD+ W
Sbjct: 262 AVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLYEVEMRKRQAEQDKLESSKTDVGW 321
Query: 399 GNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
G+QIR+YVL R VKDLRTN E+S+ +VL+GDLD FI SASL
Sbjct: 322 GHQIRSYVLDQSR-VKDLRTNVEMSNTRAVLDGDLDDFI----SASL 363
>sp|B2V5M0|RF2_SULSY Peptide chain release factor 2 OS=Sulfurihydrogenibium sp. (strain
YO3AOP1) GN=prfB PE=3 SV=1
Length = 369
Score = 320 bits (819), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 168/376 (44%), Positives = 240/376 (63%), Gaps = 8/376 (2%)
Query: 77 ILDESEGDWKSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISR 136
I++E + W+ I + +K+ L+ + L + L + PN W+D A IS
Sbjct: 2 IVEEIKTKWEE----IKEKWDNLKEILKPEKLEEEIKQLDDLMADPNFWNDTKKAQEISS 57
Query: 137 EHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDAL 196
L K++E+ ++++ +D I L E D EL E + L + ++ EL +L
Sbjct: 58 RRNYLGEKLEEILTVDKKVNNLLDYITLLEMEEDQELYNEVEKELKEIEKEISRLELGSL 117
Query: 197 LSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKR 256
LS E+D + + VQAG+GG E+ DW M+L+MY WA++RGY+V L+D P ++AG+K
Sbjct: 118 LSDEMDSKNAILTVQAGSGGVEACDWTEMLLRMYTRWAEKRGYQVELVDFQPDDVAGVKS 177
Query: 257 ATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINES 316
AT+ + G YA+GY K E GVHRLVRISPFD+ KRRHTSF+AV+VIP D V+INE
Sbjct: 178 ATLIIKGPYAYGYLKGEQGVHRLVRISPFDANKRRHTSFSAVSVIPEI-DEDIKVEINEE 236
Query: 317 DLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQ 376
DLRI+ +R+ GAGGQH N TDSAVRI HIPTGI CQ+ERSQ QNK A +L++++ Q
Sbjct: 237 DLRIDTYRASGAGGQHVNKTDSAVRITHIPTGIVVACQSERSQLQNKLKATNMLKAKLYQ 296
Query: 377 LEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGF 436
LE+ ++ + E DI+WG+QIR+YV PY+MVKDLRT +E + ++V++G++D F
Sbjct: 297 LELEKRKEKQKELEGEKKDITWGSQIRSYVFQPYQMVKDLRTGFETGNIEAVMDGEIDDF 356
Query: 437 ILSYLSASLDKDEGGQ 452
I SYL K +GGQ
Sbjct: 357 IESYLKW---KAKGGQ 369
>sp|B4RCR3|RF2_PHEZH Peptide chain release factor 2 OS=Phenylobacterium zucineum (strain
HLK1) GN=prfB PE=3 SV=1
Length = 369
Score = 319 bits (817), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 163/341 (47%), Positives = 223/341 (65%), Gaps = 3/341 (0%)
Query: 103 LQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMI 162
W+ +L+ L+A + P LW+DP A +SRE L +++ V E++L + +
Sbjct: 20 FDWEPALRKLDELNARVEDPTLWNDPDEAQAVSRERSRLSAQVEAVHGLERDLADALGYA 79
Query: 163 KLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDW 222
+LA EE D E+ L ++ ++ EL+ALLSGE D Y+E+ +GAGGTES DW
Sbjct: 80 ELADEEGDEASLDEARAQLREIKERAARAELEALLSGEADGNDAYVEINSGAGGTESNDW 139
Query: 223 ASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRI 282
A M+L+MY WAQ G V +++E GE AGIK T++V G A+G+ K E GVHRLVRI
Sbjct: 140 AGMLLRMYTRWAQAHGMSVDVIEETAGEQAGIKSVTLQVKGTNAYGWLKTEAGVHRLVRI 199
Query: 283 SPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRI 342
SP+DS RRHTSFA+V V P D + ++IN +D+R + +R+ GAGGQH N TDSAVR+
Sbjct: 200 SPYDSSARRHTSFASVWVYPVI-DDNIEIEINPADVRTDTYRASGAGGQHVNKTDSAVRL 258
Query: 343 IHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI-ARQAQMNAEHTQSLTDISWGNQ 401
HIPTGI CQ +RSQHQN+ A +L++R+ +LE+ R+A A Q TDI WG+Q
Sbjct: 259 THIPTGIAVACQTQRSQHQNRDQAWKMLRARLYELELEKREAAQQALEDQK-TDIGWGHQ 317
Query: 402 IRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
IR+YVL PY+MVKDLRT E SD VL+GDLD F+ + L+
Sbjct: 318 IRSYVLQPYQMVKDLRTEVETSDTQGVLDGDLDAFMGAALA 358
>sp|Q9A752|RF2_CAUCR Peptide chain release factor 2 OS=Caulobacter crescentus (strain
ATCC 19089 / CB15) GN=prfB PE=3 SV=1
Length = 371
Score = 317 bits (813), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 161/341 (47%), Positives = 224/341 (65%), Gaps = 3/341 (0%)
Query: 103 LQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMI 162
W +L+ L+A + P LWD P A +SRE +L K++ V++ E++L + ++
Sbjct: 20 FDWDVALRKLDELNARVEDPTLWDRPSEAQAVSRERANLAAKVEAVQSIERDLKDALEYA 79
Query: 163 KLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDW 222
+LA E+D + ++ L +++ ++ EL+ALLSGE D CY+E+ +GAGGTES DW
Sbjct: 80 ELAEMESDEDSLNDARAQLKSLKERAGRAELEALLSGEADGNDCYVEINSGAGGTESCDW 139
Query: 223 ASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRI 282
A ++L+MY WA G L++E G+ AGIK AT+ V G A+G+ K E GVHRLVRI
Sbjct: 140 AGILLRMYTRWANAHGMTTELIEETDGDQAGIKSATLLVKGANAYGWLKTEAGVHRLVRI 199
Query: 283 SPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRI 342
SP+DS RRHTSFA+ V P D + ++IN SD+R + +R+ GAGGQH N TDSAVR+
Sbjct: 200 SPYDSSARRHTSFASAWVYPVV-DDNIEIEINPSDVRTDTYRASGAGGQHINKTDSAVRL 258
Query: 343 IHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI-ARQAQMNAEHTQSLTDISWGNQ 401
HIPTGI CQ RSQHQN+ A +L++R+ + E+ R+A A Q TDI WG+Q
Sbjct: 259 THIPTGIAVACQAGRSQHQNREEAWKMLRARLYEAELQKREAAQQALEDQK-TDIGWGHQ 317
Query: 402 IRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
IR+YVL PY+MVKDLRTN E SD VL+GDLD F+ + L+
Sbjct: 318 IRSYVLQPYQMVKDLRTNVETSDTQGVLDGDLDAFMAASLA 358
>sp|B8GWM3|RF2_CAUCN Peptide chain release factor 2 OS=Caulobacter crescentus (strain
NA1000 / CB15N) GN=prfB PE=3 SV=1
Length = 371
Score = 317 bits (813), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 161/341 (47%), Positives = 224/341 (65%), Gaps = 3/341 (0%)
Query: 103 LQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMI 162
W +L+ L+A + P LWD P A +SRE +L K++ V++ E++L + ++
Sbjct: 20 FDWDVALRKLDELNARVEDPTLWDRPSEAQAVSRERANLAAKVEAVQSIERDLKDALEYA 79
Query: 163 KLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDW 222
+LA E+D + ++ L +++ ++ EL+ALLSGE D CY+E+ +GAGGTES DW
Sbjct: 80 ELAEMESDEDSLNDARAQLKSLKERAGRAELEALLSGEADGNDCYVEINSGAGGTESCDW 139
Query: 223 ASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRI 282
A ++L+MY WA G L++E G+ AGIK AT+ V G A+G+ K E GVHRLVRI
Sbjct: 140 AGILLRMYTRWANAHGMTTELIEETDGDQAGIKSATLLVKGANAYGWLKTEAGVHRLVRI 199
Query: 283 SPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRI 342
SP+DS RRHTSFA+ V P D + ++IN SD+R + +R+ GAGGQH N TDSAVR+
Sbjct: 200 SPYDSSARRHTSFASAWVYPVV-DDNIEIEINPSDVRTDTYRASGAGGQHINKTDSAVRL 258
Query: 343 IHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI-ARQAQMNAEHTQSLTDISWGNQ 401
HIPTGI CQ RSQHQN+ A +L++R+ + E+ R+A A Q TDI WG+Q
Sbjct: 259 THIPTGIAVACQAGRSQHQNREEAWKMLRARLYEAELQKREAAQQALEDQK-TDIGWGHQ 317
Query: 402 IRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
IR+YVL PY+MVKDLRTN E SD VL+GDLD F+ + L+
Sbjct: 318 IRSYVLQPYQMVKDLRTNVETSDTQGVLDGDLDAFMAASLA 358
>sp|B2U8V1|RF2_RALPJ Peptide chain release factor 2 OS=Ralstonia pickettii (strain 12J)
GN=prfB PE=3 SV=1
Length = 367
Score = 317 bits (811), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 156/344 (45%), Positives = 231/344 (67%), Gaps = 4/344 (1%)
Query: 99 IKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEH 158
+++ L + + RL + EL P +W+DP A + RE SL + + +++L
Sbjct: 23 LRRYLDYDVKSERLVEVDKELENPEVWNDPKRAQELGREKKSLETVVLALTKLDEDLTGA 82
Query: 159 IDMIKLAREENDTELELESLEA-LLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGT 217
++ +LAREE D E +E++EA MR ++ E + SG +D +C+I++QAGAGGT
Sbjct: 83 AELFELAREEGDDET-IEAIEADTAGMRAIVEDMEFRRMFSGPMDAANCFIDIQAGAGGT 141
Query: 218 ESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVH 277
E+ DWASM+L+ Y + +R+G++ +++E G++AGIK A+IKV+GEYAFG+ + E GVH
Sbjct: 142 EACDWASMLLRQYLKYCERKGFKTEVLEESEGDVAGIKSASIKVEGEYAFGFLRTETGVH 201
Query: 278 RLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTD 337
RLVR SPFDS RHTSF+++ V P D S +++N +DLR++ +R+ GAGGQH N TD
Sbjct: 202 RLVRKSPFDSAGGRHTSFSSIFVYPEV-DDSIEIEVNPADLRVDTYRASGAGGQHINKTD 260
Query: 338 SAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDIS 397
SAVRI HIPTGI CQN+RSQH+N+A AM +L+SR+ + E+ ++ + TD+
Sbjct: 261 SAVRITHIPTGIVVQCQNDRSQHRNRAEAMTMLKSRLYEHELRKRQAAADAQEAAKTDVG 320
Query: 398 WGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
WG+QIR+YVL R +KDLRTN E+S+ VL+GDLD FI + L
Sbjct: 321 WGHQIRSYVLDQSR-IKDLRTNVEISNTQKVLDGDLDPFIQASL 363
>sp|Q7W8T4|RF2_BORPA Peptide chain release factor 2 OS=Bordetella parapertussis (strain
12822 / ATCC BAA-587 / NCTC 13253) GN=prfB PE=3 SV=1
Length = 367
Score = 316 bits (810), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 157/350 (44%), Positives = 236/350 (67%), Gaps = 4/350 (1%)
Query: 93 AQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFE 152
A+ Q +++ L + + RL +++AEL P +W+DP HA + RE SL ++ +
Sbjct: 17 AEREQALRRYLDYDAKSERLQVVNAELEDPAIWNDPKHAQDLGREKKSLEDVVETLTELG 76
Query: 153 QELLEHIDMIKLAREENDTELELESLEALLT-MRRKSKEKELDALLSGELDPCSCYIEVQ 211
L + ++++LA ++D + LE++E + + K + E + + DP +C++++Q
Sbjct: 77 SGLADSCELVELALADSD-DATLEAIEHDVDRFQEKLETLEFRRMFANPADPLNCFVDIQ 135
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AGAGGTE+ DWASM+L+ Y +A+R+G++ +++E G++AG+K ATIK++GEYAFGY +
Sbjct: 136 AGAGGTEAQDWASMLLRQYLKYAERKGFKAEILEESEGDVAGLKSATIKIEGEYAFGYLR 195
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
E GVHRLVR SPFDS RHTSFA+V V P D S V++N +DLRI+ +R+ GAGGQ
Sbjct: 196 TETGVHRLVRKSPFDSSGGRHTSFASVFVYPEV-DESFEVEVNPADLRIDTYRASGAGGQ 254
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQ 391
H N TDSAVRI H P+GI CQN+RSQH+N+A AM +L+S++ +LE+ + +
Sbjct: 255 HINKTDSAVRITHAPSGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMTEQQKLED 314
Query: 392 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
S TD+ WG+QIR+YVL R +KDLRTN E+S+ VL+GDLD FI + L
Sbjct: 315 SKTDVGWGHQIRSYVLDQSR-IKDLRTNVEISNTQKVLDGDLDPFIQASL 363
>sp|B4F0M7|RF2_PROMH Peptide chain release factor 2 OS=Proteus mirabilis (strain HI4320)
GN=prfB PE=3 SV=1
Length = 365
Score = 316 bits (809), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 154/354 (43%), Positives = 235/354 (66%), Gaps = 2/354 (0%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
+A+ QV++ L + RL ++AEL +P++W++P A + +E SL ++ +
Sbjct: 14 VAERTQVLRGYLDYDAKKERLEEVNAELEQPDVWNEPEKAQALGKERSSLEAIVETIDQL 73
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
EQ L + ++ LA E +D E E++ L + +K ++ E + SGE D CY+++Q
Sbjct: 74 EQGLEDVSGLLDLAVEADDEETFNEAVAELEGLNKKLEQLEFRRMFSGEYDSADCYLDLQ 133
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AG+GGTE+ DWASM+++MY WA+ RG++ +++E G++AG+K ATIK+ GEYA+G+ +
Sbjct: 134 AGSGGTEAQDWASMLMRMYLRWAESRGFKTEIIEESDGDVAGLKSATIKIIGEYAYGWLR 193
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
E GVHRLVR SPFDSG RRHTSF++ V P D + ++IN +DLRI+ +R+ GAGGQ
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEV-DDNIDIEINPADLRIDVYRASGAGGQ 252
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQ 391
H N T+SAVRI H+PTG+ CQN+RSQH+NK AM +++++ +LE+ ++
Sbjct: 253 HVNKTESAVRITHVPTGLVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNADKQVMED 312
Query: 392 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ +DI WG+QIR+YVL R +KDLRT E + +VL+GDLD FI + L A L
Sbjct: 313 NKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASLKAGL 365
>sp|Q7VZ35|RF2_BORPE Peptide chain release factor 2 OS=Bordetella pertussis (strain
Tohama I / ATCC BAA-589 / NCTC 13251) GN=prfB PE=3 SV=1
Length = 367
Score = 315 bits (808), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 158/353 (44%), Positives = 235/353 (66%), Gaps = 10/353 (2%)
Query: 93 AQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFE 152
A+ Q +++ L + + RL +++AEL P +W+DP HA + RE SL ++ +
Sbjct: 17 AEREQALRRYLDYDAKSERLQVVNAELEDPAIWNDPKHAQDLGREKKSLEDVVETLTELG 76
Query: 153 QELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEK----ELDALLSGELDPCSCYI 208
L + ++++LA ++D +LEA+ + +EK E + + DP +C++
Sbjct: 77 SGLADSCELVELALADSDDA----TLEAIEHDADRFQEKLETLEFRRMFANPADPLNCFV 132
Query: 209 EVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFG 268
++QAGAGGTE+ DWASM+L+ Y +A+R+G++ +++E G++AG+K ATIK++GEYAFG
Sbjct: 133 DIQAGAGGTEAQDWASMLLRQYLKYAERKGFKAEILEESEGDVAGLKSATIKIEGEYAFG 192
Query: 269 YAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGA 328
Y + E GVHRLVR SPFDS RHTSFA+V V P D S V++N +DLRI+ +R+ GA
Sbjct: 193 YLRTETGVHRLVRKSPFDSSGGRHTSFASVFVYPEV-DESFEVEVNPADLRIDTYRASGA 251
Query: 329 GGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAE 388
GGQH N TDSAVRI H P+GI CQN+RSQH+N+A AM +L+S++ +LE+ + +
Sbjct: 252 GGQHINKTDSAVRITHAPSGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMTEQQK 311
Query: 389 HTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
S TD+ WG+QIR+YVL R +KDLRTN E+S+ VL+GDLD FI + L
Sbjct: 312 LEDSKTDVGWGHQIRSYVLDQSR-IKDLRTNVEISNTQKVLDGDLDPFIQASL 363
>sp|Q7WK44|RF2_BORBR Peptide chain release factor 2 OS=Bordetella bronchiseptica (strain
ATCC BAA-588 / NCTC 13252 / RB50) GN=prfB PE=3 SV=1
Length = 367
Score = 315 bits (808), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 158/353 (44%), Positives = 235/353 (66%), Gaps = 10/353 (2%)
Query: 93 AQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFE 152
A+ Q +++ L + + RL +++AEL P +W+DP HA + RE SL ++ +
Sbjct: 17 AEREQALRRYLDYDAKSERLQVVNAELEDPAIWNDPKHAQDLGREKKSLEDVVETLTELG 76
Query: 153 QELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEK----ELDALLSGELDPCSCYI 208
L + ++++LA ++D +LEA+ + +EK E + + DP +C++
Sbjct: 77 SGLADSCELVELALADSDDA----TLEAIEHDADRFQEKLETLEFRRMFANPADPLNCFV 132
Query: 209 EVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFG 268
++QAGAGGTE+ DWASM+L+ Y +A+R+G++ +++E G++AG+K ATIK++GEYAFG
Sbjct: 133 DIQAGAGGTEAQDWASMLLRQYLKYAERKGFKAEILEESEGDVAGLKSATIKIEGEYAFG 192
Query: 269 YAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGA 328
Y + E GVHRLVR SPFDS RHTSFA+V V P D S V++N +DLRI+ +R+ GA
Sbjct: 193 YLRTETGVHRLVRKSPFDSSGGRHTSFASVFVYPEV-DESFEVEVNPADLRIDTYRASGA 251
Query: 329 GGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAE 388
GGQH N TDSAVRI H P+GI CQN+RSQH+N+A AM +L+S++ +LE+ + +
Sbjct: 252 GGQHINKTDSAVRITHAPSGIVVQCQNDRSQHRNRAEAMQMLKSKLYELEMRNRMTEQQK 311
Query: 389 HTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
S TD+ WG+QIR+YVL R +KDLRTN E+S+ VL+GDLD FI + L
Sbjct: 312 LEDSKTDVGWGHQIRSYVLDQSR-IKDLRTNVEISNTQKVLDGDLDPFIQASL 363
>sp|Q63SP0|RF2_BURPS Peptide chain release factor 2 OS=Burkholderia pseudomallei (strain
K96243) GN=prfB PE=3 SV=1
Length = 367
Score = 315 bits (806), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 163/362 (45%), Positives = 235/362 (64%), Gaps = 13/362 (3%)
Query: 91 AIAQSIQVIKKR-------LQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
AI S+ +++R L + + RL ++ +L PN+W+D +A + RE SL
Sbjct: 8 AIESSLADLRRRAGELRGYLDYDVKSERLAEVNKQLEDPNVWNDSKNAQALGREKKSLES 67
Query: 144 KMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDP 203
+ + A + +L + D+ +LA EE D E + + + + + E + S DP
Sbjct: 68 VVTTLTALDNDLRDAQDLFELAHEEGDEETLVATESDAAKLEARVADIEFRRMFSNPADP 127
Query: 204 CSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDG 263
+C+I++QAGAGGTE+ DWASM+L+ Y + +R+G++ +++E G++AGIK ATIKV G
Sbjct: 128 NNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATIKVSG 187
Query: 264 EYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERF 323
EYA+GY + E G+HRLVR SPFDS RHTSF++V V P D S V+IN +DLRI+ +
Sbjct: 188 EYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEI-DDSIEVEINPADLRIDTY 246
Query: 324 RSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQA 383
R+ GAGGQH N TDSAVRI H+PTGI CQN+RSQH+N+A AM +L+SR+ + E+ ++
Sbjct: 247 RASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFEAELRKRQ 306
Query: 384 QMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSA 443
+ S TD+ WG+QIR+YVL R VKDLRTN E+S+ +VL+GDLD FI SA
Sbjct: 307 AEQDKLESSKTDVGWGHQIRSYVLDQSR-VKDLRTNVEMSNTKAVLDGDLDDFI----SA 361
Query: 444 SL 445
SL
Sbjct: 362 SL 363
>sp|A3NX26|RF2_BURP0 Peptide chain release factor 2 OS=Burkholderia pseudomallei (strain
1106a) GN=prfB PE=3 SV=3
Length = 367
Score = 315 bits (806), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 163/362 (45%), Positives = 235/362 (64%), Gaps = 13/362 (3%)
Query: 91 AIAQSIQVIKKR-------LQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
AI S+ +++R L + + RL ++ +L PN+W+D +A + RE SL
Sbjct: 8 AIESSLADLRRRAGELRGYLDYDVKSERLAEVNKQLEDPNVWNDSKNAQALGREKKSLES 67
Query: 144 KMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDP 203
+ + A + +L + D+ +LA EE D E + + + + + E + S DP
Sbjct: 68 VVTTLTALDNDLRDAQDLFELAHEEGDEETLVATESDAAKLEARVADIEFRRMFSNPADP 127
Query: 204 CSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDG 263
+C+I++QAGAGGTE+ DWASM+L+ Y + +R+G++ +++E G++AGIK ATIKV G
Sbjct: 128 NNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATIKVSG 187
Query: 264 EYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERF 323
EYA+GY + E G+HRLVR SPFDS RHTSF++V V P D S V+IN +DLRI+ +
Sbjct: 188 EYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEI-DDSIEVEINPADLRIDTY 246
Query: 324 RSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQA 383
R+ GAGGQH N TDSAVRI H+PTGI CQN+RSQH+N+A AM +L+SR+ + E+ ++
Sbjct: 247 RASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFEAELRKRQ 306
Query: 384 QMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSA 443
+ S TD+ WG+QIR+YVL R VKDLRTN E+S+ +VL+GDLD FI SA
Sbjct: 307 AEQDKLESSKTDVGWGHQIRSYVLDQSR-VKDLRTNVEMSNTKAVLDGDLDDFI----SA 361
Query: 444 SL 445
SL
Sbjct: 362 SL 363
>sp|Q62J00|RF2_BURMA Peptide chain release factor 2 OS=Burkholderia mallei (strain ATCC
23344) GN=prfB PE=3 SV=1
Length = 367
Score = 315 bits (806), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 163/362 (45%), Positives = 235/362 (64%), Gaps = 13/362 (3%)
Query: 91 AIAQSIQVIKKR-------LQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMG 143
AI S+ +++R L + + RL ++ +L PN+W+D +A + RE SL
Sbjct: 8 AIESSLADLRRRAGELRGYLDYDVKSERLAEVNKQLEDPNVWNDSKNAQALGREKKSLES 67
Query: 144 KMKEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDP 203
+ + A + +L + D+ +LA EE D E + + + + + E + S DP
Sbjct: 68 VVTTLTALDNDLRDAQDLFELAHEEGDEETLVATESDAAKLEARVADIEFRRMFSNPADP 127
Query: 204 CSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDG 263
+C+I++QAGAGGTE+ DWASM+L+ Y + +R+G++ +++E G++AGIK ATIKV G
Sbjct: 128 NNCFIDIQAGAGGTEACDWASMLLRQYLRYCERKGFKAEVLEESDGDVAGIKNATIKVSG 187
Query: 264 EYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERF 323
EYA+GY + E G+HRLVR SPFDS RHTSF++V V P D S V+IN +DLRI+ +
Sbjct: 188 EYAYGYLRTETGIHRLVRKSPFDSSGGRHTSFSSVFVYPEI-DDSIEVEINPADLRIDTY 246
Query: 324 RSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQA 383
R+ GAGGQH N TDSAVRI H+PTGI CQN+RSQH+N+A AM +L+SR+ + E+ ++
Sbjct: 247 RASGAGGQHINKTDSAVRITHMPTGIVVQCQNDRSQHRNRAEAMAMLKSRLFEAELRKRQ 306
Query: 384 QMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSA 443
+ S TD+ WG+QIR+YVL R VKDLRTN E+S+ +VL+GDLD FI SA
Sbjct: 307 AEQDKLESSKTDVGWGHQIRSYVLDQSR-VKDLRTNVEMSNTKAVLDGDLDDFI----SA 361
Query: 444 SL 445
SL
Sbjct: 362 SL 363
>sp|A8F531|RF2_THELT Peptide chain release factor 2 OS=Thermotoga lettingae (strain ATCC
BAA-301 / DSM 14385 / TMO) GN=prfB PE=3 SV=1
Length = 367
Score = 313 bits (803), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 158/331 (47%), Positives = 225/331 (67%), Gaps = 5/331 (1%)
Query: 108 LNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDM-IKLAR 166
LN+ L + +E++ P +W D AG IS++ + + ++ E+ E ID+ I+L+
Sbjct: 29 LNMELKKMESEMSDPEIWKDQRKAGEISKKVRRIKELLSDISEIERNF-EDIDVGIELSE 87
Query: 167 EENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMV 226
E+ ++E + + + + + +L+ +L+ LD + Y+ + GAGGTES DWA M+
Sbjct: 88 EDPGIAQDIEKI--VQEVEKNIRRFQLELILNDPLDQNNAYLSIHPGAGGTESHDWAQML 145
Query: 227 LQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFD 286
L+MY WA+R+G+ V L+D PGE AG+K ATI V GEYA+GY K E GVHRLVRISPFD
Sbjct: 146 LRMYMRWAERKGFIVELLDFQPGEEAGLKSATILVKGEYAYGYLKHERGVHRLVRISPFD 205
Query: 287 SGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIP 346
+ KRRHTSFA+V V+P D V+I D+RI+ FR+ G GGQ+ N TDSAVRI H+P
Sbjct: 206 AAKRRHTSFASVNVVPEISDD-IDVEIKPEDIRIDTFRASGHGGQYVNRTDSAVRITHLP 264
Query: 347 TGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYV 406
TGI +CQ+ERSQHQNKA AM VL++++ QLE+A++ + E L +ISWGNQIR+Y+
Sbjct: 265 TGIVVSCQSERSQHQNKALAMKVLKAKLYQLELAKRREQLDEIQGELKEISWGNQIRSYI 324
Query: 407 LHPYRMVKDLRTNYEVSDPDSVLEGDLDGFI 437
L PY +VKD RT+ E + D+VL+G+LD FI
Sbjct: 325 LQPYTLVKDHRTDIETGNFDAVLDGELDQFI 355
>sp|B1LB88|RF2_THESQ Peptide chain release factor 2 OS=Thermotoga sp. (strain RQ2)
GN=prfB PE=3 SV=1
Length = 367
Score = 313 bits (801), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 155/336 (46%), Positives = 223/336 (66%), Gaps = 7/336 (2%)
Query: 108 LNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLARE 167
+N L + +L P++WDD A RE+ + ++K + + + + +++A E
Sbjct: 29 INKELEEVEKKLTDPSVWDDQKKA----REYTQKLKRLKNISEDLKRVRSLFEDLEVAIE 84
Query: 168 --ENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASM 225
+ D E+ E + + K+ EL+ +L+G+ DP + Y+ V GAGGTES DWA M
Sbjct: 85 LSDEDQEMAQHVEEIVQELEGAVKKLELEIILNGKYDPNNAYLSVHPGAGGTESQDWAQM 144
Query: 226 VLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPF 285
+L+MY WA+R+G+ V +++ PGE AGIK ATI + GEYA+GY K E GVHRLVRISPF
Sbjct: 145 LLRMYMRWAERKGFDVEIVEFQPGEEAGIKDATILIKGEYAYGYLKHESGVHRLVRISPF 204
Query: 286 DSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHI 345
D+ +RRHTSFA+V VIP D ++I DL+IE FR+ G GGQ+ N T+SAVRI H+
Sbjct: 205 DAARRRHTSFASVNVIPEI-DDDVDIEIRPEDLKIETFRASGHGGQYVNKTESAVRITHL 263
Query: 346 PTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTY 405
PTGI +CQNERSQHQNK +A+ +L++++ QLE+ ++ + E L DISWGNQIR+Y
Sbjct: 264 PTGIVVSCQNERSQHQNKQTALKILKAKLYQLEMEKKRREIQEIQGELKDISWGNQIRSY 323
Query: 406 VLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
+ HPY MVKD RT E ++ D+V++GD+D FI + L
Sbjct: 324 IFHPYTMVKDHRTGVETANVDAVMDGDIDMFIEAEL 359
>sp|Q9X1R5|RF2_THEMA Peptide chain release factor 2 OS=Thermotoga maritima (strain ATCC
43589 / MSB8 / DSM 3109 / JCM 10099) GN=prfB PE=3 SV=1
Length = 369
Score = 313 bits (801), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 155/336 (46%), Positives = 223/336 (66%), Gaps = 7/336 (2%)
Query: 108 LNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLARE 167
+N L + +L P++WDD A RE+ + ++K + + + + +++A E
Sbjct: 31 INKELEEVEKKLTDPSVWDDQKKA----REYTQKLKRLKNISEDLKRVRSLFEDLEVAIE 86
Query: 168 --ENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASM 225
+ D E+ E + + K+ EL+ +L+G+ DP + Y+ V GAGGTES DWA M
Sbjct: 87 LSDEDQEMAQHVEEIVQELEGAVKKLELEIILNGKYDPNNAYLSVHPGAGGTESQDWAQM 146
Query: 226 VLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPF 285
+L+MY WA+R+G+ V +++ PGE AGIK ATI + GEYA+GY K E GVHRLVRISPF
Sbjct: 147 LLRMYMRWAERKGFDVEIVEFQPGEEAGIKDATILIKGEYAYGYLKHESGVHRLVRISPF 206
Query: 286 DSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHI 345
D+ +RRHTSFA+V VIP D ++I DL+IE FR+ G GGQ+ N T+SAVRI H+
Sbjct: 207 DAARRRHTSFASVNVIPEI-DDDVDIEIRPEDLKIETFRASGHGGQYVNKTESAVRITHL 265
Query: 346 PTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTY 405
PTGI +CQNERSQHQNK +A+ +L++++ QLE+ ++ + E L DISWGNQIR+Y
Sbjct: 266 PTGIVVSCQNERSQHQNKQTALKILKAKLYQLEMEKKRREIQEIQGELKDISWGNQIRSY 325
Query: 406 VLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
+ HPY MVKD RT E ++ D+V++GD+D FI + L
Sbjct: 326 IFHPYTMVKDHRTGVETANVDAVMDGDIDMFIEAEL 361
>sp|A5IM04|RF2_THEP1 Peptide chain release factor 2 OS=Thermotoga petrophila (strain
RKU-1 / ATCC BAA-488 / DSM 13995) GN=prfB PE=3 SV=1
Length = 367
Score = 310 bits (795), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 154/329 (46%), Positives = 220/329 (66%), Gaps = 7/329 (2%)
Query: 115 LSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLARE--ENDTE 172
+ +L P++WDD A RE+ + ++K + + + + +++A E + D E
Sbjct: 36 IEKKLTDPSVWDDQKKA----REYTQKLKRLKNISEDLKRVRSLFEDLEVAIELSDEDQE 91
Query: 173 LELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKS 232
+ E + + K+ EL+ +L+G+ DP + Y+ V GAGGTES DWA M+L+MY
Sbjct: 92 MAQHVEEIVQELEGAVKKLELEIILNGKYDPNNAYLSVHPGAGGTESQDWAQMLLRMYMR 151
Query: 233 WAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRH 292
WA+R+G+ V +++ PGE AGIK ATI + GEYA+GY K E GVHRLVRISPFD+ +RRH
Sbjct: 152 WAERKGFDVEIVEFQPGEEAGIKDATILIKGEYAYGYLKHESGVHRLVRISPFDAARRRH 211
Query: 293 TSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITAT 352
TSFA+V VIP D ++I DL+IE FR+ G GGQ+ N T+SAVRI H+PTGI +
Sbjct: 212 TSFASVNVIPEI-DDDVDIEIRPEDLKIETFRASGHGGQYVNKTESAVRITHLPTGIVVS 270
Query: 353 CQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRM 412
CQNERSQHQNK +A+ +L++++ QLE+ ++ + E L DISWGNQIR+YV HPY M
Sbjct: 271 CQNERSQHQNKQTALKILKAKLYQLEMEKKQREIQEIQGELKDISWGNQIRSYVFHPYTM 330
Query: 413 VKDLRTNYEVSDPDSVLEGDLDGFILSYL 441
VKD RT E ++ D+V++GD+D FI + L
Sbjct: 331 VKDHRTGVETANVDAVMDGDIDMFIEAEL 359
>sp|Q0C0Y0|RF2_HYPNA Peptide chain release factor 2 OS=Hyphomonas neptunium (strain ATCC
15444) GN=prfB PE=3 SV=1
Length = 368
Score = 310 bits (794), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 169/359 (47%), Positives = 237/359 (66%), Gaps = 5/359 (1%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
I S ++++RL W RL+ L+A +PN WDDP A + RE L + V+
Sbjct: 12 IESSAALLRRRLDWDTATKRLDELTALSERPNFWDDPQEAQAMMRERQKLADGIALVQTL 71
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
E+++ + ++++LA E D + + L ++ E EL ALLSGE D CY+++
Sbjct: 72 EKDVADAPELMELA--EGDASMLADLEATLRRAAARAAEAELAALLSGEADGNDCYLQIN 129
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AG GGTES DWAS++ +MY WA++RGY V L+DE GE AGIK AT+++ GE A+G+ K
Sbjct: 130 AGEGGTESQDWASILRRMYVRWAEKRGYGVELLDERDGEEAGIKSATLQIKGENAYGWLK 189
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
+E GVHRLVRISPFDS RRHTSF++VAV P D V+IN SD+R + +R+ GAGGQ
Sbjct: 190 SEQGVHRLVRISPFDSSARRHTSFSSVAVSPVI-DDKIDVEINPSDVRTDTYRASGAGGQ 248
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEI-ARQAQMNAEHT 390
H N TDSAVR+ HIPT CQ RSQHQN+ A +L+S++ +LE+ R+A +A++
Sbjct: 249 HVNRTDSAVRLTHIPTNTVVQCQAGRSQHQNRDEAWKMLRSKLYELELQKRRAVADAQYA 308
Query: 391 QSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASLDKDE 449
+ I +G+QIR+YVL PY+MVKDLRT E SD VL+GD+D F+ + L+AS+ KD+
Sbjct: 309 DK-SAIGFGHQIRSYVLQPYQMVKDLRTEVETSDTSGVLDGDIDRFLSAALAASVSKDQ 366
>sp|A9BHH8|RF2_PETMO Peptide chain release factor 2 OS=Petrotoga mobilis (strain DSM
10674 / SJ95) GN=prfB PE=3 SV=1
Length = 366
Score = 310 bits (793), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 151/323 (46%), Positives = 215/323 (66%), Gaps = 3/323 (0%)
Query: 115 LSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELE 174
L E+ +PN W+D A +IS+ +L ++ E K E + E ++L+ ++ +
Sbjct: 36 LDKEMMEPNFWNDQNRAKKISKMAQNLKDEIDEFKKLENDFEELEIAVELSEDDPSMTAQ 95
Query: 175 LESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWA 234
+E++ L + +K L LLS E D + ++ + GAGGTES DWASM+L+MY WA
Sbjct: 96 VEAI--LKVIEKKIGSFRLRMLLSEEYDDANAFLSLHPGAGGTESQDWASMLLRMYTRWA 153
Query: 235 QRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTS 294
+ Y + +D G+ AGIK ATIK+ G YA+G K E GVHRLVRISPFD+ RRHTS
Sbjct: 154 DKNNYDIETIDFQEGDEAGIKSATIKISGPYAYGKLKYESGVHRLVRISPFDANGRRHTS 213
Query: 295 FAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQ 354
FA+++V+P D + ++IN DL+I+ +RSGGAGGQH N TDSAVRI H+PTGI Q
Sbjct: 214 FASISVMP-EFDENVEIEINPDDLKIDTYRSGGAGGQHVNKTDSAVRITHLPTGIVVAVQ 272
Query: 355 NERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVK 414
NERSQHQNKA+A+ +L++++ +LE ++ + + DISWGNQIR+YVL+PY +VK
Sbjct: 273 NERSQHQNKATALKILKAKLYELEHQKKLEEKLRLRGEVKDISWGNQIRSYVLYPYTLVK 332
Query: 415 DLRTNYEVSDPDSVLEGDLDGFI 437
DLRT YE S+ +VL+G++D FI
Sbjct: 333 DLRTEYETSNAQAVLDGEIDEFI 355
>sp|B0SXB7|RF2_CAUSK Peptide chain release factor 2 OS=Caulobacter sp. (strain K31)
GN=prfB PE=3 SV=1
Length = 367
Score = 309 bits (791), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 156/340 (45%), Positives = 213/340 (62%), Gaps = 1/340 (0%)
Query: 103 LQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMI 162
W +L+ L+A + P LWD P A +SR+ SL ++ V+ E L + ++
Sbjct: 20 FDWDAALRKLDELNARVEDPTLWDRPSEAQAVSRDRASLAARVGAVQELEGGLKDALEYA 79
Query: 163 KLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDW 222
+LA E D L ++ L ++ ++ EL+ALLSGE D CY+E+ +GAGGTES DW
Sbjct: 80 ELADMEGDEALLEDARAQLKDLKDRAGRAELEALLSGEADGNDCYVEINSGAGGTESCDW 139
Query: 223 ASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRI 282
A M+L+MY WA V L++E G+ GIK AT+ V G A+G+ K E GVHRLVRI
Sbjct: 140 AGMLLRMYSRWANAHKMSVELVEETAGDQVGIKSATLLVKGANAYGWLKTEAGVHRLVRI 199
Query: 283 SPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRI 342
SP+D+ +RHTSFA+ V P D + + IN SD+R + +R+ GAGGQH N TDSAVR+
Sbjct: 200 SPYDAAAKRHTSFASAWVYPVV-DDTIEIDINPSDVRTDTYRASGAGGQHINKTDSAVRL 258
Query: 343 IHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQI 402
HIPTGI CQ RSQHQN+ A +L++R+ + E+ R+ TDI WG+QI
Sbjct: 259 THIPTGIAVACQAGRSQHQNREEAWKMLRARLYEAELQRREAAQQALEDQKTDIGWGHQI 318
Query: 403 RTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLS 442
R+YVL PY+MVKDLRTN E SD VL+GDLD F+ + L+
Sbjct: 319 RSYVLQPYQMVKDLRTNVETSDTQGVLDGDLDAFMGASLA 358
>sp|A7FF38|RF2_YERP3 Peptide chain release factor 2 OS=Yersinia pseudotuberculosis
serotype O:1b (strain IP 31758) GN=prfB PE=3 SV=1
Length = 365
Score = 306 bits (785), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 154/360 (42%), Positives = 231/360 (64%), Gaps = 2/360 (0%)
Query: 86 KSHAAAIAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKM 145
K+ ++ V++ L + RL ++AEL +P++W++P A + +E +L +
Sbjct: 8 KNRIQDLSDRTAVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSTLEEIV 67
Query: 146 KEVKAFEQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCS 205
+ EQ L + +++LA E +D E E++ L + K + E + SGE D +
Sbjct: 68 TTIDQLEQGLEDVSGLLELAVEADDEETFNETIAELEVLDGKLGQLEFRRMFSGEYDRAN 127
Query: 206 CYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEY 265
CY+++QAG+GGTE+ DWASM+L+MY WA+ RG++ +++E G++AG+K AT+K+ GEY
Sbjct: 128 CYLDLQAGSGGTEAQDWASMLLRMYLRWAESRGFKTEIIEESDGDVAGLKSATVKIIGEY 187
Query: 266 AFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRS 325
AFG+ + E GVHRLVR SPFDSG RRHTSF++ V P D ++IN +DLRI+ +R+
Sbjct: 188 AFGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEV-DDDIDIEINPADLRIDVYRA 246
Query: 326 GGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQM 385
GAGGQH N T+SAVRI HIPT I CQN+RSQH+NK AM L++++ + E+ ++
Sbjct: 247 SGAGGQHVNKTESAVRITHIPTNIVTQCQNDRSQHKNKDQAMKQLKAKLYEFEMQKKNAD 306
Query: 386 NAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ +DI WG+QIR+YVL R +KDLRT E + +VL+GDLD FI + L A L
Sbjct: 307 KQVLEDNKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGDLDKFIEASLKAGL 365
>sp|B4RQU4|RF2_NEIG2 Peptide chain release factor 2 OS=Neisseria gonorrhoeae (strain
NCCP11945) GN=prfB PE=3 SV=1
Length = 367
Score = 306 bits (784), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 150/320 (46%), Positives = 216/320 (67%), Gaps = 2/320 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
P LW+DP A I +E L G + + + ++ +I++A EEND E E +
Sbjct: 46 PELWNDPKRAQEIGKESKILEGIVLTLDNIASGIEDNRMLIEMAVEENDEEGFAAVKEDV 105
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
+ ++ + E + + DP +C+I++ AGAGGTE+ DWA M+ +MY +A+R+G+++
Sbjct: 106 AGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDWAGMLFRMYSRYAERKGFKI 165
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
+++E GEIAGI RATI+V+GEYA+G + E GVHRLVR SPFDS +RHTSFA+V V
Sbjct: 166 EILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRYSPFDSNNKRHTSFASVFVY 225
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D S ++IN +DLRI+ +R+ GAGGQH N TDSAVRI H PTGI CQN+RSQH
Sbjct: 226 PEI-DDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGIVVQCQNDRSQHA 284
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
NKA+AM +L+S++ +LE+ ++ + + +D+ WG+QIR+YVL R +KDLRT YE
Sbjct: 285 NKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIRSYVLDSSR-IKDLRTGYE 343
Query: 422 VSDPDSVLEGDLDGFILSYL 441
V + +VL+GDLDGFI + L
Sbjct: 344 VGNTKAVLDGDLDGFIEASL 363
>sp|Q5F5H5|RF2_NEIG1 Peptide chain release factor 2 OS=Neisseria gonorrhoeae (strain
ATCC 700825 / FA 1090) GN=prfB PE=3 SV=1
Length = 367
Score = 306 bits (784), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 150/320 (46%), Positives = 216/320 (67%), Gaps = 2/320 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
P LW+DP A I +E L G + + + ++ +I++A EEND E E +
Sbjct: 46 PELWNDPKRAQEIGKESKILEGIVLTLDNIASGIEDNRMLIEMAVEENDEEGFAAVKEDV 105
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
+ ++ + E + + DP +C+I++ AGAGGTE+ DWA M+ +MY +A+R+G+++
Sbjct: 106 AGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDWAGMLFRMYSRYAERKGFKI 165
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
+++E GEIAGI RATI+V+GEYA+G + E GVHRLVR SPFDS +RHTSFA+V V
Sbjct: 166 EILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRYSPFDSNNKRHTSFASVFVY 225
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D S ++IN +DLRI+ +R+ GAGGQH N TDSAVRI H PTGI CQN+RSQH
Sbjct: 226 PEI-DDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGIVVQCQNDRSQHA 284
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
NKA+AM +L+S++ +LE+ ++ + + +D+ WG+QIR+YVL R +KDLRT YE
Sbjct: 285 NKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIRSYVLDSSR-IKDLRTGYE 343
Query: 422 VSDPDSVLEGDLDGFILSYL 441
V + +VL+GDLDGFI + L
Sbjct: 344 VGNTKAVLDGDLDGFIEASL 363
>sp|B7LYF5|RF2_ECO8A Peptide chain release factor 2 OS=Escherichia coli O8 (strain IAI1)
GN=prfB PE=3 SV=1
Length = 365
Score = 306 bits (784), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 152/348 (43%), Positives = 225/348 (64%), Gaps = 2/348 (0%)
Query: 98 VIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLE 157
V++ L + RL ++AEL +P++W++P A + +E SL + + +Q L +
Sbjct: 20 VLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLED 79
Query: 158 HIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGT 217
+++LA E +D E E++ L + K + E + SGE D CY+++QAG+GGT
Sbjct: 80 VSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGT 139
Query: 218 ESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVH 277
E+ DWASM+ +MY WA+ RG++ +++E GE+AGIK TIK+ G+YA+G+ + E GVH
Sbjct: 140 EAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVH 199
Query: 278 RLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTD 337
RLVR SPFDSG RRHTSF++ V P D ++IN +DLRI+ +R+ GAGGQH N T+
Sbjct: 200 RLVRKSPFDSGGRRHTSFSSAFVYPEV-DDDIDIEINPADLRIDVYRASGAGGQHVNRTE 258
Query: 338 SAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDIS 397
SAVRI HIPTGI CQN+RSQH+NK AM +++++ +LE+ ++ + +DI
Sbjct: 259 SAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIG 318
Query: 398 WGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
WG+QIR+YVL R +KDLRT E + +VL+G LD FI + L A L
Sbjct: 319 WGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL 365
>sp|Q9JXB3|RF2_NEIMB Peptide chain release factor 2 OS=Neisseria meningitidis serogroup
B (strain MC58) GN=prfB PE=3 SV=1
Length = 367
Score = 306 bits (784), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 150/320 (46%), Positives = 215/320 (67%), Gaps = 2/320 (0%)
Query: 122 PNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLEHIDMIKLAREENDTELELESLEAL 181
P LW+DP A I +E L G + + + ++ +I++ EEND E E +
Sbjct: 46 PELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLIEMTVEENDEEGFAAVQEDV 105
Query: 182 LTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGTESMDWASMVLQMYKSWAQRRGYRV 241
+ ++ + E + + DP +C+I++ AGAGGTE+ DWA M+ +MY +A+R+G+R+
Sbjct: 106 AGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDWAGMLFRMYSRYAERKGFRI 165
Query: 242 TLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVI 301
+++E GEIAGI RATI+V+GEYA+G + E GVHRLVR SPFDS +RHTSFA+V V
Sbjct: 166 EILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRYSPFDSNNKRHTSFASVFVY 225
Query: 302 PNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTDSAVRIIHIPTGITATCQNERSQHQ 361
P D S ++IN +DLRI+ +R+ GAGGQH N TDSAVRI H PTGI CQN+RSQH
Sbjct: 226 PEI-DDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGIVVQCQNDRSQHA 284
Query: 362 NKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDISWGNQIRTYVLHPYRMVKDLRTNYE 421
NKA+AM +L+S++ +LE+ ++ + + +D+ WG+QIR+YVL R +KDLRT YE
Sbjct: 285 NKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIRSYVLDSSR-IKDLRTGYE 343
Query: 422 VSDPDSVLEGDLDGFILSYL 441
V + +VL+GDLDGFI + L
Sbjct: 344 VGNTKAVLDGDLDGFIEASL 363
>sp|P66025|RF2_SHIFL Peptide chain release factor 2 OS=Shigella flexneri GN=prfB PE=3
SV=1
Length = 365
Score = 306 bits (784), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 152/348 (43%), Positives = 225/348 (64%), Gaps = 2/348 (0%)
Query: 98 VIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLE 157
V++ L + RL ++AEL +P++W++P A + +E SL + + +Q L +
Sbjct: 20 VLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLED 79
Query: 158 HIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGT 217
+++LA E +D E E++ L + K + E + SGE D CY+++QAG+GGT
Sbjct: 80 VSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGT 139
Query: 218 ESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVH 277
E+ DWASM+ +MY WA+ RG++ +++E GE+AGIK TIK+ G+YA+G+ + E GVH
Sbjct: 140 EAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVH 199
Query: 278 RLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTD 337
RLVR SPFDSG RRHTSF++ V P D ++IN +DLRI+ +R+ GAGGQH N T+
Sbjct: 200 RLVRKSPFDSGGRRHTSFSSAFVYPEV-DDDIDIEINPADLRIDVYRASGAGGQHVNRTE 258
Query: 338 SAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDIS 397
SAVRI HIPTGI CQN+RSQH+NK AM +++++ +LE+ ++ + +DI
Sbjct: 259 SAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIG 318
Query: 398 WGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
WG+QIR+YVL R +KDLRT E + +VL+G LD FI + L A L
Sbjct: 319 WGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL 365
>sp|B7LPA4|RF2_ESCF3 Peptide chain release factor 2 OS=Escherichia fergusonii (strain
ATCC 35469 / DSM 13698 / CDC 0568-73) GN=prfB PE=3 SV=1
Length = 365
Score = 306 bits (784), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 152/348 (43%), Positives = 225/348 (64%), Gaps = 2/348 (0%)
Query: 98 VIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLE 157
V++ L + RL ++AEL +P++W++P A + +E SL + + +Q L +
Sbjct: 20 VLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLED 79
Query: 158 HIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGT 217
+++LA E +D E E++ L + K + E + SGE D CY+++QAG+GGT
Sbjct: 80 VSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGT 139
Query: 218 ESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVH 277
E+ DWASM+ +MY WA+ RG++ +++E GE+AGIK TIK+ G+YA+G+ + E GVH
Sbjct: 140 EAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVH 199
Query: 278 RLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTD 337
RLVR SPFDSG RRHTSF++ V P D ++IN +DLRI+ +R+ GAGGQH N T+
Sbjct: 200 RLVRKSPFDSGGRRHTSFSSAFVYPEV-DDDIDIEINPADLRIDVYRASGAGGQHVNRTE 258
Query: 338 SAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDIS 397
SAVRI HIPTGI CQN+RSQH+NK AM +++++ +LE+ ++ + +DI
Sbjct: 259 SAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIG 318
Query: 398 WGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
WG+QIR+YVL R +KDLRT E + +VL+G LD FI + L A L
Sbjct: 319 WGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL 365
>sp|B1LR73|RF2_ECOSM Peptide chain release factor 2 OS=Escherichia coli (strain SMS-3-5
/ SECEC) GN=prfB PE=3 SV=1
Length = 365
Score = 306 bits (784), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 152/348 (43%), Positives = 225/348 (64%), Gaps = 2/348 (0%)
Query: 98 VIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLE 157
V++ L + RL ++AEL +P++W++P A + +E SL + + +Q L +
Sbjct: 20 VLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLED 79
Query: 158 HIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGT 217
+++LA E +D E E++ L + K + E + SGE D CY+++QAG+GGT
Sbjct: 80 VSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGT 139
Query: 218 ESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVH 277
E+ DWASM+ +MY WA+ RG++ +++E GE+AGIK TIK+ G+YA+G+ + E GVH
Sbjct: 140 EAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVH 199
Query: 278 RLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTD 337
RLVR SPFDSG RRHTSF++ V P D ++IN +DLRI+ +R+ GAGGQH N T+
Sbjct: 200 RLVRKSPFDSGGRRHTSFSSAFVYPEV-DDDIDIEINPADLRIDVYRASGAGGQHVNRTE 258
Query: 338 SAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDIS 397
SAVRI HIPTGI CQN+RSQH+NK AM +++++ +LE+ ++ + +DI
Sbjct: 259 SAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIG 318
Query: 398 WGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
WG+QIR+YVL R +KDLRT E + +VL+G LD FI + L A L
Sbjct: 319 WGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL 365
>sp|B7N7D5|RF2_ECOLU Peptide chain release factor 2 OS=Escherichia coli O17:K52:H18
(strain UMN026 / ExPEC) GN=prfB PE=3 SV=1
Length = 365
Score = 306 bits (784), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 152/348 (43%), Positives = 225/348 (64%), Gaps = 2/348 (0%)
Query: 98 VIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLE 157
V++ L + RL ++AEL +P++W++P A + +E SL + + +Q L +
Sbjct: 20 VLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLED 79
Query: 158 HIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGT 217
+++LA E +D E E++ L + K + E + SGE D CY+++QAG+GGT
Sbjct: 80 VSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGT 139
Query: 218 ESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVH 277
E+ DWASM+ +MY WA+ RG++ +++E GE+AGIK TIK+ G+YA+G+ + E GVH
Sbjct: 140 EAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVH 199
Query: 278 RLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTD 337
RLVR SPFDSG RRHTSF++ V P D ++IN +DLRI+ +R+ GAGGQH N T+
Sbjct: 200 RLVRKSPFDSGGRRHTSFSSAFVYPEV-DDDIDIEINPADLRIDVYRASGAGGQHVNRTE 258
Query: 338 SAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDIS 397
SAVRI HIPTGI CQN+RSQH+NK AM +++++ +LE+ ++ + +DI
Sbjct: 259 SAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIG 318
Query: 398 WGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
WG+QIR+YVL R +KDLRT E + +VL+G LD FI + L A L
Sbjct: 319 WGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL 365
>sp|B1ITB1|RF2_ECOLC Peptide chain release factor 2 OS=Escherichia coli (strain ATCC
8739 / DSM 1576 / Crooks) GN=prfB PE=3 SV=1
Length = 365
Score = 306 bits (784), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 152/348 (43%), Positives = 225/348 (64%), Gaps = 2/348 (0%)
Query: 98 VIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLE 157
V++ L + RL ++AEL +P++W++P A + +E SL + + +Q L +
Sbjct: 20 VLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLED 79
Query: 158 HIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGT 217
+++LA E +D E E++ L + K + E + SGE D CY+++QAG+GGT
Sbjct: 80 VSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGT 139
Query: 218 ESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVH 277
E+ DWASM+ +MY WA+ RG++ +++E GE+AGIK TIK+ G+YA+G+ + E GVH
Sbjct: 140 EAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVH 199
Query: 278 RLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTD 337
RLVR SPFDSG RRHTSF++ V P D ++IN +DLRI+ +R+ GAGGQH N T+
Sbjct: 200 RLVRKSPFDSGGRRHTSFSSAFVYPEV-DDDIDIEINPADLRIDVYRASGAGGQHVNRTE 258
Query: 338 SAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDIS 397
SAVRI HIPTGI CQN+RSQH+NK AM +++++ +LE+ ++ + +DI
Sbjct: 259 SAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIG 318
Query: 398 WGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
WG+QIR+YVL R +KDLRT E + +VL+G LD FI + L A L
Sbjct: 319 WGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL 365
>sp|P66023|RF2_ECOL6 Peptide chain release factor 2 OS=Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC) GN=prfB PE=3 SV=1
Length = 365
Score = 306 bits (784), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 152/348 (43%), Positives = 225/348 (64%), Gaps = 2/348 (0%)
Query: 98 VIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLE 157
V++ L + RL ++AEL +P++W++P A + +E SL + + +Q L +
Sbjct: 20 VLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLED 79
Query: 158 HIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGT 217
+++LA E +D E E++ L + K + E + SGE D CY+++QAG+GGT
Sbjct: 80 VSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGT 139
Query: 218 ESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVH 277
E+ DWASM+ +MY WA+ RG++ +++E GE+AGIK TIK+ G+YA+G+ + E GVH
Sbjct: 140 EAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVH 199
Query: 278 RLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTD 337
RLVR SPFDSG RRHTSF++ V P D ++IN +DLRI+ +R+ GAGGQH N T+
Sbjct: 200 RLVRKSPFDSGGRRHTSFSSAFVYPEV-DDDIDIEINPADLRIDVYRASGAGGQHVNRTE 258
Query: 338 SAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDIS 397
SAVRI HIPTGI CQN+RSQH+NK AM +++++ +LE+ ++ + +DI
Sbjct: 259 SAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIG 318
Query: 398 WGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
WG+QIR+YVL R +KDLRT E + +VL+G LD FI + L A L
Sbjct: 319 WGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL 365
>sp|B7MZI9|RF2_ECO81 Peptide chain release factor 2 OS=Escherichia coli O81 (strain
ED1a) GN=prfB PE=3 SV=1
Length = 365
Score = 306 bits (784), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 152/348 (43%), Positives = 225/348 (64%), Gaps = 2/348 (0%)
Query: 98 VIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLE 157
V++ L + RL ++AEL +P++W++P A + +E SL + + +Q L +
Sbjct: 20 VLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLED 79
Query: 158 HIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGT 217
+++LA E +D E E++ L + K + E + SGE D CY+++QAG+GGT
Sbjct: 80 VSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGT 139
Query: 218 ESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVH 277
E+ DWASM+ +MY WA+ RG++ +++E GE+AGIK TIK+ G+YA+G+ + E GVH
Sbjct: 140 EAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVH 199
Query: 278 RLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTD 337
RLVR SPFDSG RRHTSF++ V P D ++IN +DLRI+ +R+ GAGGQH N T+
Sbjct: 200 RLVRKSPFDSGGRRHTSFSSAFVYPEV-DDDIDIEINPADLRIDVYRASGAGGQHVNRTE 258
Query: 338 SAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDIS 397
SAVRI HIPTGI CQN+RSQH+NK AM +++++ +LE+ ++ + +DI
Sbjct: 259 SAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIG 318
Query: 398 WGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
WG+QIR+YVL R +KDLRT E + +VL+G LD FI + L A L
Sbjct: 319 WGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL 365
>sp|B7NW32|RF2_ECO7I Peptide chain release factor 2 OS=Escherichia coli O7:K1 (strain
IAI39 / ExPEC) GN=prfB PE=3 SV=1
Length = 365
Score = 306 bits (784), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 152/348 (43%), Positives = 225/348 (64%), Gaps = 2/348 (0%)
Query: 98 VIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLE 157
V++ L + RL ++AEL +P++W++P A + +E SL + + +Q L +
Sbjct: 20 VLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLED 79
Query: 158 HIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGT 217
+++LA E +D E E++ L + K + E + SGE D CY+++QAG+GGT
Sbjct: 80 VSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGT 139
Query: 218 ESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVH 277
E+ DWASM+ +MY WA+ RG++ +++E GE+AGIK TIK+ G+YA+G+ + E GVH
Sbjct: 140 EAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVH 199
Query: 278 RLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTD 337
RLVR SPFDSG RRHTSF++ V P D ++IN +DLRI+ +R+ GAGGQH N T+
Sbjct: 200 RLVRKSPFDSGGRRHTSFSSAFVYPEV-DDDIDIEINPADLRIDVYRASGAGGQHVNRTE 258
Query: 338 SAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDIS 397
SAVRI HIPTGI CQN+RSQH+NK AM +++++ +LE+ ++ + +DI
Sbjct: 259 SAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIG 318
Query: 398 WGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
WG+QIR+YVL R +KDLRT E + +VL+G LD FI + L A L
Sbjct: 319 WGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL 365
>sp|P66024|RF2_ECO57 Peptide chain release factor 2 OS=Escherichia coli O157:H7 GN=prfB
PE=3 SV=1
Length = 365
Score = 306 bits (784), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 152/348 (43%), Positives = 225/348 (64%), Gaps = 2/348 (0%)
Query: 98 VIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLE 157
V++ L + RL ++AEL +P++W++P A + +E SL + + +Q L +
Sbjct: 20 VLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLED 79
Query: 158 HIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGT 217
+++LA E +D E E++ L + K + E + SGE D CY+++QAG+GGT
Sbjct: 80 VSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGT 139
Query: 218 ESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVH 277
E+ DWASM+ +MY WA+ RG++ +++E GE+AGIK TIK+ G+YA+G+ + E GVH
Sbjct: 140 EAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVH 199
Query: 278 RLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTD 337
RLVR SPFDSG RRHTSF++ V P D ++IN +DLRI+ +R+ GAGGQH N T+
Sbjct: 200 RLVRKSPFDSGGRRHTSFSSAFVYPEV-DDDIDIEINPADLRIDVYRASGAGGQHVNRTE 258
Query: 338 SAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDIS 397
SAVRI HIPTGI CQN+RSQH+NK AM +++++ +LE+ ++ + +DI
Sbjct: 259 SAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIG 318
Query: 398 WGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
WG+QIR+YVL R +KDLRT E + +VL+G LD FI + L A L
Sbjct: 319 WGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL 365
>sp|B7LF76|RF2_ECO55 Peptide chain release factor 2 OS=Escherichia coli (strain 55989 /
EAEC) GN=prfB PE=3 SV=1
Length = 365
Score = 306 bits (784), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 152/348 (43%), Positives = 225/348 (64%), Gaps = 2/348 (0%)
Query: 98 VIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLE 157
V++ L + RL ++AEL +P++W++P A + +E SL + + +Q L +
Sbjct: 20 VLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLED 79
Query: 158 HIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGT 217
+++LA E +D E E++ L + K + E + SGE D CY+++QAG+GGT
Sbjct: 80 VSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGT 139
Query: 218 ESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVH 277
E+ DWASM+ +MY WA+ RG++ +++E GE+AGIK TIK+ G+YA+G+ + E GVH
Sbjct: 140 EAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVH 199
Query: 278 RLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTD 337
RLVR SPFDSG RRHTSF++ V P D ++IN +DLRI+ +R+ GAGGQH N T+
Sbjct: 200 RLVRKSPFDSGGRRHTSFSSAFVYPEV-DDDIDIEINPADLRIDVYRASGAGGQHVNRTE 258
Query: 338 SAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDIS 397
SAVRI HIPTGI CQN+RSQH+NK AM +++++ +LE+ ++ + +DI
Sbjct: 259 SAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIG 318
Query: 398 WGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
WG+QIR+YVL R +KDLRT E + +VL+G LD FI + L A L
Sbjct: 319 WGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL 365
>sp|B7MM78|RF2_ECO45 Peptide chain release factor 2 OS=Escherichia coli O45:K1 (strain
S88 / ExPEC) GN=prfB PE=3 SV=1
Length = 365
Score = 306 bits (784), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 152/348 (43%), Positives = 225/348 (64%), Gaps = 2/348 (0%)
Query: 98 VIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLE 157
V++ L + RL ++AEL +P++W++P A + +E SL + + +Q L +
Sbjct: 20 VLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLED 79
Query: 158 HIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGT 217
+++LA E +D E E++ L + K + E + SGE D CY+++QAG+GGT
Sbjct: 80 VSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGT 139
Query: 218 ESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVH 277
E+ DWASM+ +MY WA+ RG++ +++E GE+AGIK TIK+ G+YA+G+ + E GVH
Sbjct: 140 EAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVH 199
Query: 278 RLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTD 337
RLVR SPFDSG RRHTSF++ V P D ++IN +DLRI+ +R+ GAGGQH N T+
Sbjct: 200 RLVRKSPFDSGGRRHTSFSSAFVYPEV-DDDIDIEINPADLRIDVYRASGAGGQHVNRTE 258
Query: 338 SAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDIS 397
SAVRI HIPTGI CQN+RSQH+NK AM +++++ +LE+ ++ + +DI
Sbjct: 259 SAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIG 318
Query: 398 WGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
WG+QIR+YVL R +KDLRT E + +VL+G LD FI + L A L
Sbjct: 319 WGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL 365
>sp|B7UHU0|RF2_ECO27 Peptide chain release factor 2 OS=Escherichia coli O127:H6 (strain
E2348/69 / EPEC) GN=prfB PE=3 SV=1
Length = 365
Score = 306 bits (784), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 152/348 (43%), Positives = 225/348 (64%), Gaps = 2/348 (0%)
Query: 98 VIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLE 157
V++ L + RL ++AEL +P++W++P A + +E SL + + +Q L +
Sbjct: 20 VLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLED 79
Query: 158 HIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGT 217
+++LA E +D E E++ L + K + E + SGE D CY+++QAG+GGT
Sbjct: 80 VSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGT 139
Query: 218 ESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVH 277
E+ DWASM+ +MY WA+ RG++ +++E GE+AGIK TIK+ G+YA+G+ + E GVH
Sbjct: 140 EAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVH 199
Query: 278 RLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTD 337
RLVR SPFDSG RRHTSF++ V P D ++IN +DLRI+ +R+ GAGGQH N T+
Sbjct: 200 RLVRKSPFDSGGRRHTSFSSAFVYPEV-DDDIDIEINPADLRIDVYRASGAGGQHVNRTE 258
Query: 338 SAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDIS 397
SAVRI HIPTGI CQN+RSQH+NK AM +++++ +LE+ ++ + +DI
Sbjct: 259 SAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIG 318
Query: 398 WGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
WG+QIR+YVL R +KDLRT E + +VL+G LD FI + L A L
Sbjct: 319 WGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL 365
>sp|P07012|RF2_ECOLI Peptide chain release factor 2 OS=Escherichia coli (strain K12)
GN=prfB PE=1 SV=3
Length = 365
Score = 306 bits (783), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 152/348 (43%), Positives = 225/348 (64%), Gaps = 2/348 (0%)
Query: 98 VIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLE 157
V++ L + RL ++AEL +P++W++P A + +E SL + + +Q L +
Sbjct: 20 VLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLED 79
Query: 158 HIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGT 217
+++LA E +D E E++ L + K + E + SGE D CY+++QAG+GGT
Sbjct: 80 VSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGT 139
Query: 218 ESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVH 277
E+ DWASM+ +MY WA+ RG++ +++E GE+AGIK TIK+ G+YA+G+ + E GVH
Sbjct: 140 EAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVH 199
Query: 278 RLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTD 337
RLVR SPFDSG RRHTSF++ V P D ++IN +DLRI+ +R+ GAGGQH N T+
Sbjct: 200 RLVRKSPFDSGGRRHTSFSSAFVYPEV-DDDIDIEINPADLRIDVYRTSGAGGQHVNRTE 258
Query: 338 SAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDIS 397
SAVRI HIPTGI CQN+RSQH+NK AM +++++ +LE+ ++ + +DI
Sbjct: 259 SAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIG 318
Query: 398 WGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
WG+QIR+YVL R +KDLRT E + +VL+G LD FI + L A L
Sbjct: 319 WGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL 365
>sp|B1XEH8|RF2_ECODH Peptide chain release factor 2 OS=Escherichia coli (strain K12 /
DH10B) GN=prfB PE=3 SV=1
Length = 365
Score = 306 bits (783), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 152/348 (43%), Positives = 225/348 (64%), Gaps = 2/348 (0%)
Query: 98 VIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLE 157
V++ L + RL ++AEL +P++W++P A + +E SL + + +Q L +
Sbjct: 20 VLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLED 79
Query: 158 HIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGT 217
+++LA E +D E E++ L + K + E + SGE D CY+++QAG+GGT
Sbjct: 80 VSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGT 139
Query: 218 ESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVH 277
E+ DWASM+ +MY WA+ RG++ +++E GE+AGIK TIK+ G+YA+G+ + E GVH
Sbjct: 140 EAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVH 199
Query: 278 RLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTD 337
RLVR SPFDSG RRHTSF++ V P D ++IN +DLRI+ +R+ GAGGQH N T+
Sbjct: 200 RLVRKSPFDSGGRRHTSFSSAFVYPEV-DDDIDIEINPADLRIDVYRTSGAGGQHVNRTE 258
Query: 338 SAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDIS 397
SAVRI HIPTGI CQN+RSQH+NK AM +++++ +LE+ ++ + +DI
Sbjct: 259 SAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIG 318
Query: 398 WGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
WG+QIR+YVL R +KDLRT E + +VL+G LD FI + L A L
Sbjct: 319 WGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL 365
>sp|C5A0G3|RF2_ECOBW Peptide chain release factor 2 OS=Escherichia coli (strain K12 /
MC4100 / BW2952) GN=prfB PE=3 SV=1
Length = 365
Score = 306 bits (783), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 152/348 (43%), Positives = 225/348 (64%), Gaps = 2/348 (0%)
Query: 98 VIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAFEQELLE 157
V++ L + RL ++AEL +P++W++P A + +E SL + + +Q L +
Sbjct: 20 VLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLED 79
Query: 158 HIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQAGAGGT 217
+++LA E +D E E++ L + K + E + SGE D CY+++QAG+GGT
Sbjct: 80 VSGLLELAVEADDEETFNEAVAELDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGT 139
Query: 218 ESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAKAEVGVH 277
E+ DWASM+ +MY WA+ RG++ +++E GE+AGIK TIK+ G+YA+G+ + E GVH
Sbjct: 140 EAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVH 199
Query: 278 RLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQHANTTD 337
RLVR SPFDSG RRHTSF++ V P D ++IN +DLRI+ +R+ GAGGQH N T+
Sbjct: 200 RLVRKSPFDSGGRRHTSFSSAFVYPEV-DDDIDIEINPADLRIDVYRTSGAGGQHVNRTE 258
Query: 338 SAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQSLTDIS 397
SAVRI HIPTGI CQN+RSQH+NK AM +++++ +LE+ ++ + +DI
Sbjct: 259 SAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIG 318
Query: 398 WGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
WG+QIR+YVL R +KDLRT E + +VL+G LD FI + L A L
Sbjct: 319 WGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL 365
>sp|P0A289|RF2_SALTY Peptide chain release factor 2 OS=Salmonella typhimurium (strain
LT2 / SGSC1412 / ATCC 700720) GN=prfB PE=3 SV=1
Length = 365
Score = 306 bits (783), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 155/354 (43%), Positives = 227/354 (64%), Gaps = 2/354 (0%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
+ + V++ L + RL ++AEL +P++W++P A + +E SL + +
Sbjct: 14 LTERTNVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTLDQM 73
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
Q L + +++LA E +D E E++ L T+ K + E + SGE D CY+++Q
Sbjct: 74 TQGLDDVSGLLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQ 133
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AG+GGTE+ DWASM+L+MY WA+ RG++ +++E GE+AGIK ATIK+ GEYA+G+ +
Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAYGWLR 193
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
E GVHRLVR SPFDSG RRHTSF++ V P + IN +DLRI+ +R+ GAGGQ
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVD-DDIDIDINPADLRIDVYRASGAGGQ 252
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQ 391
H N T+SAVRI HIPTGI CQN+RSQH+NK AM +++++ +LE+ ++
Sbjct: 253 HVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMED 312
Query: 392 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ +DI WG+QIR+YVL R +KDLRT E + +VL+G LD FI + L A L
Sbjct: 313 TKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL 365
>sp|P0A290|RF2_SALTI Peptide chain release factor 2 OS=Salmonella typhi GN=prfB PE=3
SV=1
Length = 365
Score = 306 bits (783), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 155/354 (43%), Positives = 227/354 (64%), Gaps = 2/354 (0%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
+ + V++ L + RL ++AEL +P++W++P A + +E SL + +
Sbjct: 14 LTERTNVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTLDQM 73
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
Q L + +++LA E +D E E++ L T+ K + E + SGE D CY+++Q
Sbjct: 74 TQGLDDVSGLLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQ 133
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AG+GGTE+ DWASM+L+MY WA+ RG++ +++E GE+AGIK ATIK+ GEYA+G+ +
Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAYGWLR 193
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
E GVHRLVR SPFDSG RRHTSF++ V P + IN +DLRI+ +R+ GAGGQ
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVD-DDIDIDINPADLRIDVYRASGAGGQ 252
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQ 391
H N T+SAVRI HIPTGI CQN+RSQH+NK AM +++++ +LE+ ++
Sbjct: 253 HVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMED 312
Query: 392 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ +DI WG+QIR+YVL R +KDLRT E + +VL+G LD FI + L A L
Sbjct: 313 TKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL 365
>sp|B5BFK6|RF2_SALPK Peptide chain release factor 2 OS=Salmonella paratyphi A (strain
AKU_12601) GN=prfB PE=3 SV=1
Length = 365
Score = 306 bits (783), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 155/354 (43%), Positives = 227/354 (64%), Gaps = 2/354 (0%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
+ + V++ L + RL ++AEL +P++W++P A + +E SL + +
Sbjct: 14 LTERTNVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTLDQM 73
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
Q L + +++LA E +D E E++ L T+ K + E + SGE D CY+++Q
Sbjct: 74 TQGLDDVSGLLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQ 133
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AG+GGTE+ DWASM+L+MY WA+ RG++ +++E GE+AGIK ATIK+ GEYA+G+ +
Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAYGWLR 193
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
E GVHRLVR SPFDSG RRHTSF++ V P + IN +DLRI+ +R+ GAGGQ
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVD-DDIDIDINPADLRIDVYRASGAGGQ 252
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQ 391
H N T+SAVRI HIPTGI CQN+RSQH+NK AM +++++ +LE+ ++
Sbjct: 253 HVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMED 312
Query: 392 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ +DI WG+QIR+YVL R +KDLRT E + +VL+G LD FI + L A L
Sbjct: 313 TKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL 365
>sp|Q5PJG1|RF2_SALPA Peptide chain release factor 2 OS=Salmonella paratyphi A (strain
ATCC 9150 / SARB42) GN=prfB PE=3 SV=1
Length = 365
Score = 306 bits (783), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 155/354 (43%), Positives = 227/354 (64%), Gaps = 2/354 (0%)
Query: 92 IAQSIQVIKKRLQWKNLNVRLNLLSAELNKPNLWDDPVHAGRISREHGSLMGKMKEVKAF 151
+ + V++ L + RL ++AEL +P++W++P A + +E SL + +
Sbjct: 14 LTERTNVLRGYLDYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAIVDTLDQM 73
Query: 152 EQELLEHIDMIKLAREENDTELELESLEALLTMRRKSKEKELDALLSGELDPCSCYIEVQ 211
Q L + +++LA E +D E E++ L T+ K + E + SGE D CY+++Q
Sbjct: 74 TQGLDDVSGLLELAVEADDEETFNEAVAELNTLEEKLAQLEFRRMFSGEYDSADCYLDIQ 133
Query: 212 AGAGGTESMDWASMVLQMYKSWAQRRGYRVTLMDEMPGEIAGIKRATIKVDGEYAFGYAK 271
AG+GGTE+ DWASM+L+MY WA+ RG++ +++E GE+AGIK ATIK+ GEYA+G+ +
Sbjct: 134 AGSGGTEAQDWASMLLRMYLRWAEARGFKTEVIEESEGEVAGIKSATIKISGEYAYGWLR 193
Query: 272 AEVGVHRLVRISPFDSGKRRHTSFAAVAVIPNSGDSSTHVQINESDLRIERFRSGGAGGQ 331
E GVHRLVR SPFDSG RRHTSF++ V P + IN +DLRI+ +R+ GAGGQ
Sbjct: 194 TETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVD-DDIDIDINPADLRIDVYRASGAGGQ 252
Query: 332 HANTTDSAVRIIHIPTGITATCQNERSQHQNKASAMGVLQSRVNQLEIARQAQMNAEHTQ 391
H N T+SAVRI HIPTGI CQN+RSQH+NK AM +++++ +LE+ ++
Sbjct: 253 HVNRTESAVRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMED 312
Query: 392 SLTDISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGDLDGFILSYLSASL 445
+ +DI WG+QIR+YVL R +KDLRT E + +VL+G LD FI + L A L
Sbjct: 313 TKSDIGWGSQIRSYVLDDSR-IKDLRTGVETRNTQAVLDGSLDQFIEASLKAGL 365
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.131 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 166,472,826
Number of Sequences: 539616
Number of extensions: 6681259
Number of successful extensions: 21043
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 949
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 18470
Number of HSP's gapped (non-prelim): 980
length of query: 453
length of database: 191,569,459
effective HSP length: 121
effective length of query: 332
effective length of database: 126,275,923
effective search space: 41923606436
effective search space used: 41923606436
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)