Query 012940
Match_columns 453
No_of_seqs 232 out of 1853
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 19:11:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012940.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012940hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3doc_A Glyceraldehyde 3-phosph 100.0 4E-120 1E-124 914.8 31.7 333 85-421 1-333 (335)
2 4dib_A GAPDH, glyceraldehyde 3 100.0 4E-120 1E-124 916.4 30.7 334 86-424 4-337 (345)
3 3pym_A GAPDH 3, glyceraldehyde 100.0 7E-119 2E-123 904.8 32.7 328 87-421 2-331 (332)
4 3v1y_O PP38, glyceraldehyde-3- 100.0 2E-118 6E-123 903.3 31.4 330 86-422 3-336 (337)
5 3ids_C GAPDH, glyceraldehyde-3 100.0 2E-118 8E-123 907.7 27.2 335 85-423 1-354 (359)
6 3h9e_O Glyceraldehyde-3-phosph 100.0 8E-117 3E-121 894.1 33.0 331 86-423 7-339 (346)
7 3lvf_P GAPDH 1, glyceraldehyde 100.0 4E-117 1E-121 893.1 29.8 330 84-423 2-337 (338)
8 3hja_A GAPDH, glyceraldehyde-3 100.0 4E-117 1E-121 897.8 26.2 331 84-421 19-356 (356)
9 1obf_O Glyceraldehyde 3-phosph 100.0 9E-115 3E-119 878.1 32.1 331 87-422 2-334 (335)
10 2b4r_O Glyceraldehyde-3-phosph 100.0 3E-114 9E-119 877.1 29.4 330 86-421 11-344 (345)
11 2ep7_A GAPDH, glyceraldehyde-3 100.0 1E-114 4E-119 878.8 26.7 332 85-423 1-341 (342)
12 2d2i_A Glyceraldehyde 3-phosph 100.0 1E-112 4E-117 875.6 31.7 358 85-451 1-359 (380)
13 2g82_O GAPDH, glyceraldehyde-3 100.0 1E-107 4E-112 826.7 30.6 329 87-422 1-329 (331)
14 1rm4_O Glyceraldehyde 3-phosph 100.0 3E-106 1E-110 818.0 32.1 336 86-424 1-336 (337)
15 3b1j_A Glyceraldehyde 3-phosph 100.0 1E-105 4E-110 814.6 32.8 337 85-424 1-338 (339)
16 3cmc_O GAPDH, glyceraldehyde-3 100.0 3E-104 1E-108 802.6 31.0 331 87-422 2-332 (334)
17 1hdg_O Holo-D-glyceraldehyde-3 100.0 6E-103 2E-107 792.2 31.6 330 87-421 1-331 (332)
18 3cps_A Glyceraldehyde 3-phosph 100.0 3E-103 1E-107 799.8 29.5 334 84-422 15-352 (354)
19 1gad_O D-glyceraldehyde-3-phos 100.0 3E-102 1E-106 786.3 29.6 327 87-420 2-329 (330)
20 2x5j_O E4PDH, D-erythrose-4-ph 100.0 4E-102 1E-106 788.3 28.4 332 85-422 1-336 (339)
21 3e5r_O PP38, glyceraldehyde-3- 100.0 2E-101 8E-106 782.3 32.0 332 85-422 2-336 (337)
22 1u8f_O GAPDH, glyceraldehyde-3 100.0 7E-101 2E-105 777.8 30.0 331 85-422 2-334 (335)
23 2yyy_A Glyceraldehyde-3-phosph 100.0 1.1E-59 3.8E-64 477.9 13.6 242 85-356 1-253 (343)
24 2hjs_A USG-1 protein homolog; 100.0 1.5E-49 5.1E-54 402.6 24.8 304 85-422 5-336 (340)
25 2yv3_A Aspartate-semialdehyde 100.0 5.3E-49 1.8E-53 397.4 22.7 297 87-421 1-329 (331)
26 2r00_A Aspartate-semialdehyde 100.0 1.2E-48 4E-53 395.5 24.1 302 86-421 3-333 (336)
27 1cf2_P Protein (glyceraldehyde 100.0 1.6E-48 5.5E-53 394.8 7.6 274 86-405 1-285 (337)
28 1b7g_O Protein (glyceraldehyde 100.0 3.8E-46 1.3E-50 377.8 12.0 228 86-355 1-245 (340)
29 1t4b_A Aspartate-semialdehyde 100.0 1.4E-45 4.8E-50 377.4 10.4 239 87-354 2-299 (367)
30 2czc_A Glyceraldehyde-3-phosph 100.0 5.8E-45 2E-49 367.4 10.7 237 85-356 1-244 (334)
31 1xyg_A Putative N-acetyl-gamma 100.0 1.3E-41 4.3E-46 347.0 15.1 295 86-424 16-348 (359)
32 2ep5_A 350AA long hypothetical 100.0 2.1E-41 7.2E-46 343.8 13.9 242 86-355 4-270 (350)
33 1ys4_A Aspartate-semialdehyde 100.0 7.7E-40 2.6E-44 332.4 13.7 245 84-355 6-276 (354)
34 2ozp_A N-acetyl-gamma-glutamyl 100.0 2.6E-39 8.8E-44 328.2 14.0 294 86-424 4-334 (345)
35 3pwk_A Aspartate-semialdehyde 100.0 5.6E-38 1.9E-42 321.3 18.9 300 85-423 1-345 (366)
36 4dpk_A Malonyl-COA/succinyl-CO 100.0 1.2E-38 4E-43 325.4 11.2 307 85-422 6-354 (359)
37 4dpl_A Malonyl-COA/succinyl-CO 100.0 6.3E-38 2.2E-42 320.0 16.3 307 85-422 6-354 (359)
38 3tz6_A Aspartate-semialdehyde 100.0 2.4E-37 8.2E-42 314.3 18.8 293 87-421 2-342 (344)
39 3uw3_A Aspartate-semialdehyde 100.0 3.7E-38 1.3E-42 323.7 10.6 295 86-420 4-375 (377)
40 3pzr_A Aspartate-semialdehyde 100.0 9.2E-38 3.2E-42 320.0 12.0 295 87-421 1-368 (370)
41 3hsk_A Aspartate-semialdehyde 100.0 8.4E-36 2.9E-40 306.6 12.0 245 84-355 17-300 (381)
42 3dr3_A N-acetyl-gamma-glutamyl 100.0 4.7E-35 1.6E-39 296.7 12.5 295 87-422 5-330 (337)
43 2nqt_A N-acetyl-gamma-glutamyl 100.0 1.2E-32 4E-37 280.5 16.6 305 86-424 9-341 (352)
44 1vkn_A N-acetyl-gamma-glutamyl 99.9 3.3E-28 1.1E-32 247.7 8.3 293 86-424 13-340 (351)
45 1nvm_B Acetaldehyde dehydrogen 98.7 3.6E-08 1.2E-12 98.5 8.1 154 86-270 4-163 (312)
46 3b1j_C CP12; alpha/beta fold, 98.0 2E-06 6.9E-11 55.8 1.5 23 431-453 3-25 (26)
47 1f06_A MESO-diaminopimelate D- 97.6 5.1E-05 1.7E-09 75.4 6.0 89 86-210 3-91 (320)
48 3bio_A Oxidoreductase, GFO/IDH 97.4 0.00011 3.7E-09 72.5 5.5 87 86-207 9-95 (304)
49 4hkt_A Inositol 2-dehydrogenas 97.4 0.00023 7.7E-09 70.1 7.6 94 85-209 2-95 (331)
50 3ohs_X Trans-1,2-dihydrobenzen 97.4 0.00017 5.7E-09 71.3 6.5 98 85-209 1-98 (334)
51 3qv1_G CP12 protein; rossman f 97.4 3.7E-05 1.3E-09 62.8 1.4 23 431-453 60-82 (82)
52 3ezy_A Dehydrogenase; structur 97.4 0.00019 6.4E-09 71.2 6.6 96 85-209 1-96 (344)
53 2ejw_A HDH, homoserine dehydro 97.3 0.0002 6.8E-09 72.2 6.1 87 86-206 3-96 (332)
54 2lj9_A CP12 domain-containing 97.3 5.2E-05 1.8E-09 63.9 1.5 22 432-453 78-99 (99)
55 3mz0_A Inositol 2-dehydrogenas 97.3 0.00039 1.3E-08 68.9 7.5 98 85-209 1-98 (344)
56 3i23_A Oxidoreductase, GFO/IDH 97.3 0.00038 1.3E-08 69.3 7.0 96 85-209 1-97 (349)
57 4f3y_A DHPR, dihydrodipicolina 97.2 0.00046 1.6E-08 67.7 6.6 96 86-207 7-103 (272)
58 4had_A Probable oxidoreductase 97.2 0.00056 1.9E-08 67.6 7.1 95 86-209 23-118 (350)
59 3euw_A MYO-inositol dehydrogen 97.1 0.00076 2.6E-08 66.7 7.8 94 86-209 4-97 (344)
60 3f4l_A Putative oxidoreductase 97.1 0.00055 1.9E-08 68.0 6.7 96 85-209 1-97 (345)
61 3mtj_A Homoserine dehydrogenas 97.1 0.00059 2E-08 71.4 6.8 94 86-209 10-111 (444)
62 3e18_A Oxidoreductase; dehydro 97.1 0.00074 2.5E-08 67.7 6.9 93 86-209 5-97 (359)
63 3kux_A Putative oxidoreductase 97.1 0.0011 3.7E-08 66.0 8.1 92 86-209 7-99 (352)
64 4gqa_A NAD binding oxidoreduct 97.1 0.00048 1.6E-08 70.0 5.5 97 86-209 26-128 (412)
65 3c8m_A Homoserine dehydrogenas 97.1 0.00029 1E-08 70.6 3.8 36 86-121 6-46 (331)
66 4fb5_A Probable oxidoreductase 97.1 0.0011 3.7E-08 65.7 7.9 99 84-209 22-126 (393)
67 3ec7_A Putative dehydrogenase; 97.1 0.00087 3E-08 67.1 7.3 98 85-209 22-119 (357)
68 3gdo_A Uncharacterized oxidore 97.0 0.001 3.6E-08 66.5 7.7 92 86-209 5-97 (358)
69 3ing_A Homoserine dehydrogenas 97.0 0.00091 3.1E-08 67.1 7.2 36 86-121 4-43 (325)
70 3e9m_A Oxidoreductase, GFO/IDH 97.0 0.00061 2.1E-08 67.3 5.7 95 85-209 4-99 (330)
71 3db2_A Putative NADPH-dependen 97.0 0.00038 1.3E-08 69.3 4.2 95 85-209 4-98 (354)
72 3upl_A Oxidoreductase; rossman 97.0 0.00083 2.8E-08 70.4 6.8 109 86-206 23-137 (446)
73 3ijp_A DHPR, dihydrodipicolina 97.0 0.00022 7.5E-09 70.7 2.3 97 85-206 20-117 (288)
74 2ho3_A Oxidoreductase, GFO/IDH 97.0 0.0014 4.9E-08 64.2 7.9 94 86-209 1-94 (325)
75 3evn_A Oxidoreductase, GFO/IDH 96.9 0.00097 3.3E-08 65.7 6.3 95 86-209 5-99 (329)
76 3e82_A Putative oxidoreductase 96.9 0.0016 5.6E-08 65.2 7.7 92 86-209 7-99 (364)
77 3fhl_A Putative oxidoreductase 96.9 0.0012 4.2E-08 65.9 6.7 92 86-209 5-97 (362)
78 4h3v_A Oxidoreductase domain p 96.9 0.00063 2.2E-08 67.3 4.6 97 86-209 6-107 (390)
79 3ic5_A Putative saccharopine d 96.9 0.0014 4.9E-08 53.4 6.0 97 85-207 4-100 (118)
80 3rc1_A Sugar 3-ketoreductase; 96.8 0.0013 4.4E-08 65.7 6.4 94 86-209 27-121 (350)
81 3c1a_A Putative oxidoreductase 96.8 0.0012 3.9E-08 64.7 5.9 93 85-209 9-101 (315)
82 1ydw_A AX110P-like protein; st 96.8 0.0017 5.9E-08 64.7 6.9 98 86-209 6-103 (362)
83 1p9l_A Dihydrodipicolinate red 96.8 0.0016 5.4E-08 63.0 6.3 122 87-268 1-133 (245)
84 3cea_A MYO-inositol 2-dehydrog 96.8 0.0017 5.8E-08 63.9 6.6 95 86-209 8-103 (346)
85 3q2i_A Dehydrogenase; rossmann 96.8 0.00095 3.3E-08 66.4 4.7 96 85-209 12-107 (354)
86 3qy9_A DHPR, dihydrodipicolina 96.8 0.0011 3.7E-08 64.0 4.8 33 86-121 3-35 (243)
87 2dc1_A L-aspartate dehydrogena 96.7 0.0012 4.1E-08 62.2 5.0 136 87-269 1-136 (236)
88 3moi_A Probable dehydrogenase; 96.7 0.0013 4.6E-08 66.4 5.6 94 85-209 1-96 (387)
89 1tlt_A Putative oxidoreductase 96.7 0.0024 8.3E-08 62.4 7.2 92 86-209 5-97 (319)
90 1xea_A Oxidoreductase, GFO/IDH 96.7 0.0041 1.4E-07 60.9 8.6 94 85-209 1-95 (323)
91 3do5_A HOM, homoserine dehydro 96.6 0.0011 3.8E-08 66.5 4.2 96 86-207 2-114 (327)
92 2ixa_A Alpha-N-acetylgalactosa 96.6 0.0029 9.8E-08 65.2 7.3 101 86-209 20-123 (444)
93 1ebf_A Homoserine dehydrogenas 96.6 0.003 1E-07 64.2 7.0 36 86-121 4-40 (358)
94 3m2t_A Probable dehydrogenase; 96.6 0.0023 8E-08 64.0 6.1 95 86-209 5-100 (359)
95 4ew6_A D-galactose-1-dehydroge 96.6 0.0022 7.4E-08 63.7 5.8 87 86-209 25-113 (330)
96 1zh8_A Oxidoreductase; TM0312, 96.5 0.0039 1.3E-07 61.8 6.9 96 86-209 18-114 (340)
97 3uuw_A Putative oxidoreductase 96.5 0.0027 9.1E-08 61.8 5.5 92 86-209 6-98 (308)
98 1h6d_A Precursor form of gluco 96.5 0.0047 1.6E-07 63.7 7.6 99 86-209 83-182 (433)
99 1dih_A Dihydrodipicolinate red 96.4 0.0047 1.6E-07 60.3 6.8 99 86-209 5-104 (273)
100 1j5p_A Aspartate dehydrogenase 96.4 0.0021 7.3E-08 62.6 4.3 135 86-271 12-148 (253)
101 1lc0_A Biliverdin reductase A; 96.1 0.0074 2.5E-07 58.8 6.5 90 86-209 7-97 (294)
102 3ip3_A Oxidoreductase, putativ 96.1 0.0014 4.9E-08 64.7 1.3 96 85-209 1-99 (337)
103 3u3x_A Oxidoreductase; structu 95.9 0.0081 2.8E-07 60.2 5.6 94 86-209 26-120 (361)
104 2glx_A 1,5-anhydro-D-fructose 95.8 0.014 4.8E-07 57.0 6.9 93 87-209 1-94 (332)
105 1r0k_A 1-deoxy-D-xylulose 5-ph 95.5 0.014 4.7E-07 60.2 5.7 110 87-206 5-122 (388)
106 3v5n_A Oxidoreductase; structu 95.5 0.018 6E-07 58.9 6.5 97 86-209 37-142 (417)
107 3o9z_A Lipopolysaccaride biosy 95.5 0.025 8.6E-07 55.6 7.4 94 86-209 3-104 (312)
108 3oa2_A WBPB; oxidoreductase, s 95.5 0.022 7.6E-07 56.1 6.9 94 86-209 3-105 (318)
109 4gmf_A Yersiniabactin biosynth 95.4 0.034 1.2E-06 56.5 8.4 92 86-209 7-102 (372)
110 2dt5_A AT-rich DNA-binding pro 95.4 0.019 6.5E-07 54.1 5.9 94 87-210 81-174 (211)
111 2p2s_A Putative oxidoreductase 95.4 0.029 9.8E-07 55.1 7.3 93 86-209 4-98 (336)
112 2nvw_A Galactose/lactose metab 95.2 0.018 6.3E-07 60.2 5.6 99 86-209 39-146 (479)
113 3oqb_A Oxidoreductase; structu 94.8 0.021 7E-07 57.2 4.4 97 83-209 3-115 (383)
114 1y81_A Conserved hypothetical 94.5 0.12 4.2E-06 45.1 8.1 84 86-208 14-101 (138)
115 3dty_A Oxidoreductase, GFO/IDH 94.4 0.034 1.2E-06 56.2 5.1 97 86-209 12-117 (398)
116 2vt3_A REX, redox-sensing tran 94.4 0.051 1.7E-06 51.4 5.8 94 87-210 86-179 (215)
117 3ius_A Uncharacterized conserv 94.3 0.38 1.3E-05 45.0 11.8 33 85-120 4-36 (286)
118 3btv_A Galactose/lactose metab 94.2 0.022 7.4E-07 58.7 3.1 99 86-209 20-127 (438)
119 3keo_A Redox-sensing transcrip 94.0 0.037 1.3E-06 52.4 4.0 97 87-210 85-182 (212)
120 3abi_A Putative uncharacterize 93.8 0.019 6.5E-07 57.5 1.7 92 86-208 16-107 (365)
121 3dqp_A Oxidoreductase YLBE; al 93.7 0.1 3.5E-06 47.3 6.4 31 87-120 1-32 (219)
122 1iuk_A Hypothetical protein TT 93.7 0.15 5E-06 44.7 7.0 86 87-209 14-103 (140)
123 3a06_A 1-deoxy-D-xylulose 5-ph 93.6 0.19 6.3E-06 51.5 8.7 109 87-208 4-116 (376)
124 2d59_A Hypothetical protein PH 93.5 0.22 7.4E-06 43.6 7.9 83 87-208 23-109 (144)
125 2duw_A Putative COA-binding pr 93.4 0.24 8.3E-06 43.4 8.0 85 87-208 14-102 (145)
126 2bma_A Glutamate dehydrogenase 92.8 0.28 9.5E-06 51.7 8.7 103 86-206 252-365 (470)
127 3m2p_A UDP-N-acetylglucosamine 92.8 0.22 7.5E-06 47.5 7.4 33 85-120 1-34 (311)
128 2nu8_A Succinyl-COA ligase [AD 92.7 0.15 5.1E-06 49.9 6.2 87 86-206 7-94 (288)
129 3e48_A Putative nucleoside-dip 92.0 0.12 4.2E-06 48.6 4.5 95 87-207 1-104 (289)
130 2hmt_A YUAA protein; RCK, KTN, 91.9 0.24 8.2E-06 41.2 5.7 30 88-120 8-37 (144)
131 3c1o_A Eugenol synthase; pheny 91.8 0.18 6.1E-06 48.3 5.4 101 85-207 3-112 (321)
132 3ff4_A Uncharacterized protein 91.7 0.45 1.5E-05 41.0 7.3 82 88-209 6-91 (122)
133 3dhn_A NAD-dependent epimerase 91.3 0.17 5.7E-06 45.8 4.4 31 87-120 5-36 (227)
134 1qyd_A Pinoresinol-lariciresin 91.2 0.21 7.1E-06 47.4 5.1 32 87-121 5-37 (313)
135 4ina_A Saccharopine dehydrogen 91.2 0.34 1.2E-05 49.4 7.0 156 87-263 2-167 (405)
136 1hdo_A Biliverdin IX beta redu 91.1 0.25 8.6E-06 43.5 5.3 31 87-120 4-35 (206)
137 3fwz_A Inner membrane protein 91.1 0.23 7.9E-06 42.5 4.9 34 84-120 5-38 (140)
138 3ew7_A LMO0794 protein; Q8Y8U8 91.1 0.25 8.4E-06 44.2 5.3 31 87-120 1-32 (221)
139 2r6j_A Eugenol synthase 1; phe 91.0 0.21 7.1E-06 47.8 5.0 33 85-120 10-43 (318)
140 3e8x_A Putative NAD-dependent 89.6 2.2 7.5E-05 38.8 10.4 32 86-120 21-53 (236)
141 3i6i_A Putative leucoanthocyan 89.1 0.41 1.4E-05 46.5 5.4 99 86-208 10-119 (346)
142 1qyc_A Phenylcoumaran benzylic 89.0 0.36 1.2E-05 45.6 4.8 100 87-208 5-113 (308)
143 1bgv_A Glutamate dehydrogenase 88.9 0.67 2.3E-05 48.5 7.0 102 87-207 231-344 (449)
144 1oi7_A Succinyl-COA synthetase 88.4 0.48 1.6E-05 46.4 5.2 85 87-206 8-94 (288)
145 2tmg_A Protein (glutamate dehy 88.2 0.69 2.3E-05 47.9 6.5 95 86-208 209-314 (415)
146 4g2n_A D-isomer specific 2-hyd 88.1 0.41 1.4E-05 48.2 4.7 32 86-120 173-204 (345)
147 3kb6_A D-lactate dehydrogenase 88.0 0.56 1.9E-05 46.9 5.6 31 86-119 141-171 (334)
148 2pi1_A D-lactate dehydrogenase 88.0 0.41 1.4E-05 47.8 4.6 32 86-120 141-172 (334)
149 2gas_A Isoflavone reductase; N 87.7 0.42 1.4E-05 45.1 4.2 31 87-120 3-34 (307)
150 3ego_A Probable 2-dehydropanto 87.7 1.6 5.4E-05 42.4 8.5 32 85-120 1-32 (307)
151 3pp8_A Glyoxylate/hydroxypyruv 87.7 0.4 1.4E-05 47.6 4.3 32 86-120 139-170 (315)
152 3qvo_A NMRA family protein; st 87.6 0.49 1.7E-05 43.5 4.5 34 85-120 22-56 (236)
153 1qp8_A Formate dehydrogenase; 87.4 0.47 1.6E-05 46.7 4.6 32 86-120 124-155 (303)
154 1lss_A TRK system potassium up 87.4 0.64 2.2E-05 38.4 4.8 31 87-120 5-35 (140)
155 1vpd_A Tartronate semialdehyde 87.4 0.48 1.6E-05 45.2 4.5 32 85-119 4-35 (299)
156 3evt_A Phosphoglycerate dehydr 87.4 0.48 1.6E-05 47.3 4.6 32 86-120 137-168 (324)
157 3hg7_A D-isomer specific 2-hyd 87.3 0.49 1.7E-05 47.2 4.6 32 86-120 140-171 (324)
158 3llv_A Exopolyphosphatase-rela 87.2 0.55 1.9E-05 39.6 4.3 31 87-120 7-37 (141)
159 4huj_A Uncharacterized protein 87.1 0.56 1.9E-05 43.3 4.7 33 86-121 23-55 (220)
160 1vm6_A DHPR, dihydrodipicolina 87.1 0.86 2.9E-05 43.6 6.0 161 86-329 12-176 (228)
161 1xdw_A NAD+-dependent (R)-2-hy 87.1 0.5 1.7E-05 47.0 4.6 32 86-120 146-177 (331)
162 2yq5_A D-isomer specific 2-hyd 87.0 0.51 1.7E-05 47.5 4.6 33 86-121 148-180 (343)
163 2yfq_A Padgh, NAD-GDH, NAD-spe 86.9 0.56 1.9E-05 48.7 4.9 34 86-122 212-245 (421)
164 1dxy_A D-2-hydroxyisocaproate 86.9 0.53 1.8E-05 46.9 4.6 32 86-120 145-176 (333)
165 3gg9_A D-3-phosphoglycerate de 86.8 0.53 1.8E-05 47.5 4.6 32 86-120 160-191 (352)
166 2g76_A 3-PGDH, D-3-phosphoglyc 86.6 0.56 1.9E-05 46.9 4.7 32 86-120 165-196 (335)
167 2wm3_A NMRA-like family domain 86.6 0.56 1.9E-05 44.4 4.4 32 87-120 6-38 (299)
168 3jtm_A Formate dehydrogenase, 86.4 0.52 1.8E-05 47.6 4.3 32 86-120 164-195 (351)
169 3gt0_A Pyrroline-5-carboxylate 86.3 0.57 2E-05 43.8 4.3 35 85-119 1-36 (247)
170 1gtm_A Glutamate dehydrogenase 86.1 0.63 2.2E-05 48.1 4.9 32 87-121 213-245 (419)
171 4hy3_A Phosphoglycerate oxidor 86.1 0.55 1.9E-05 47.7 4.3 32 86-120 176-207 (365)
172 4e5n_A Thermostable phosphite 86.1 0.48 1.6E-05 47.2 3.8 33 86-121 145-177 (330)
173 1mx3_A CTBP1, C-terminal bindi 86.0 0.63 2.1E-05 46.8 4.7 32 86-120 168-199 (347)
174 4egb_A DTDP-glucose 4,6-dehydr 86.0 0.99 3.4E-05 43.4 5.9 35 86-121 24-59 (346)
175 1gdh_A D-glycerate dehydrogena 86.0 0.64 2.2E-05 46.0 4.7 32 86-120 146-177 (320)
176 3r3j_A Glutamate dehydrogenase 85.9 1.3 4.5E-05 46.4 7.1 103 86-206 239-352 (456)
177 2cuk_A Glycerate dehydrogenase 85.9 0.66 2.2E-05 45.8 4.6 32 86-120 144-175 (311)
178 3gvx_A Glycerate dehydrogenase 85.8 0.53 1.8E-05 46.2 3.9 31 87-120 123-153 (290)
179 4dgs_A Dehydrogenase; structur 85.8 0.65 2.2E-05 46.7 4.7 32 86-120 171-202 (340)
180 2b69_A UDP-glucuronate decarbo 85.8 6.8 0.00023 37.5 11.8 32 86-120 27-59 (343)
181 2ew2_A 2-dehydropantoate 2-red 85.6 0.71 2.4E-05 43.8 4.6 33 85-120 2-34 (316)
182 1wwk_A Phosphoglycerate dehydr 85.4 0.72 2.4E-05 45.4 4.6 33 86-121 142-174 (307)
183 3l4b_C TRKA K+ channel protien 85.1 0.6 2.1E-05 42.7 3.7 31 87-120 1-31 (218)
184 1j4a_A D-LDH, D-lactate dehydr 85.0 0.75 2.6E-05 45.8 4.6 33 86-121 146-178 (333)
185 4fcc_A Glutamate dehydrogenase 84.8 1.2 3.9E-05 46.8 6.1 102 86-206 235-347 (450)
186 2yv1_A Succinyl-COA ligase [AD 84.8 1 3.5E-05 44.1 5.4 88 86-208 13-103 (294)
187 2ekl_A D-3-phosphoglycerate de 84.8 0.79 2.7E-05 45.2 4.6 33 86-121 142-174 (313)
188 2o4c_A Erythronate-4-phosphate 84.7 0.77 2.6E-05 46.9 4.6 31 86-119 116-146 (380)
189 3c24_A Putative oxidoreductase 84.7 0.9 3.1E-05 43.3 4.9 33 85-120 10-43 (286)
190 3oet_A Erythronate-4-phosphate 84.6 0.78 2.7E-05 46.9 4.6 31 86-119 119-149 (381)
191 1sc6_A PGDH, D-3-phosphoglycer 84.4 0.81 2.8E-05 47.0 4.6 32 86-120 145-176 (404)
192 2w2k_A D-mandelate dehydrogena 84.4 0.84 2.9E-05 45.7 4.7 31 87-120 164-195 (348)
193 3aoe_E Glutamate dehydrogenase 84.3 1.4 5E-05 45.6 6.5 33 86-121 218-250 (419)
194 2yv2_A Succinyl-COA synthetase 84.3 1.4 4.8E-05 43.2 6.2 88 86-208 13-104 (297)
195 4ezb_A Uncharacterized conserv 84.2 0.87 3E-05 44.6 4.6 36 83-120 21-56 (317)
196 1id1_A Putative potassium chan 84.0 1 3.4E-05 38.8 4.5 31 87-120 4-34 (153)
197 3aog_A Glutamate dehydrogenase 83.6 2.2 7.5E-05 44.5 7.5 95 86-208 235-339 (440)
198 3ba1_A HPPR, hydroxyphenylpyru 83.6 0.84 2.9E-05 45.6 4.3 31 86-119 164-194 (333)
199 3ggo_A Prephenate dehydrogenas 83.4 0.99 3.4E-05 44.4 4.7 35 85-120 32-66 (314)
200 2nac_A NAD-dependent formate d 83.3 0.85 2.9E-05 46.8 4.3 32 86-120 191-222 (393)
201 1xgk_A Nitrogen metabolite rep 83.3 1.9 6.4E-05 42.5 6.7 32 86-120 5-37 (352)
202 2dbq_A Glyoxylate reductase; D 83.2 1 3.4E-05 44.8 4.6 32 86-120 150-181 (334)
203 2gcg_A Glyoxylate reductase/hy 83.1 0.86 2.9E-05 45.1 4.1 32 86-120 155-186 (330)
204 2d0i_A Dehydrogenase; structur 82.9 0.93 3.2E-05 45.1 4.3 32 86-120 146-177 (333)
205 1yb4_A Tartronic semialdehyde 82.7 0.8 2.7E-05 43.4 3.6 31 86-119 3-33 (295)
206 2g1u_A Hypothetical protein TM 82.6 1.4 4.7E-05 38.0 4.8 31 87-120 20-50 (155)
207 2vns_A Metalloreductase steap3 82.5 1.1 3.6E-05 41.3 4.2 32 86-120 28-59 (215)
208 3sc6_A DTDP-4-dehydrorhamnose 82.2 1.2 4.1E-05 41.6 4.6 45 84-131 3-52 (287)
209 2ahr_A Putative pyrroline carb 82.0 1.2 3.9E-05 41.7 4.4 30 87-119 4-33 (259)
210 2j6i_A Formate dehydrogenase; 81.8 1 3.5E-05 45.5 4.1 32 86-120 164-196 (364)
211 3g0o_A 3-hydroxyisobutyrate de 81.7 1.3 4.4E-05 42.8 4.7 33 85-120 6-38 (303)
212 3k5p_A D-3-phosphoglycerate de 81.6 1.2 4.1E-05 46.1 4.6 32 86-120 156-187 (416)
213 3d4o_A Dipicolinate synthase s 81.3 1.3 4.6E-05 42.7 4.6 31 87-120 156-186 (293)
214 3c85_A Putative glutathione-re 81.1 1.1 3.7E-05 39.6 3.6 32 86-120 39-71 (183)
215 3two_A Mannitol dehydrogenase; 81.0 2.8 9.6E-05 40.9 6.9 81 88-201 179-259 (348)
216 3qha_A Putative oxidoreductase 80.8 1.1 3.6E-05 43.3 3.7 32 86-120 15-46 (296)
217 2x0j_A Malate dehydrogenase; o 80.4 3.1 0.00011 40.9 7.0 22 87-108 1-22 (294)
218 2rir_A Dipicolinate synthase, 80.3 1.5 5.1E-05 42.4 4.6 32 86-120 157-188 (300)
219 3cky_A 2-hydroxymethyl glutara 79.8 1.6 5.4E-05 41.6 4.5 31 86-119 4-34 (301)
220 2qyt_A 2-dehydropantoate 2-red 79.8 1.2 4.1E-05 42.5 3.7 39 82-120 4-45 (317)
221 3l9w_A Glutathione-regulated p 79.8 1.3 4.5E-05 45.4 4.2 36 87-127 5-40 (413)
222 3b1f_A Putative prephenate deh 79.6 1.5 5.2E-05 41.6 4.3 33 86-119 6-38 (290)
223 1v9l_A Glutamate dehydrogenase 79.5 3.1 0.00011 43.1 6.9 32 87-121 211-242 (421)
224 2axq_A Saccharopine dehydrogen 79.4 1.8 6.3E-05 45.1 5.2 90 87-201 24-113 (467)
225 2z2v_A Hypothetical protein PH 79.1 1.2 4.3E-05 44.7 3.7 88 86-202 16-103 (365)
226 3dfu_A Uncharacterized protein 78.9 0.8 2.7E-05 43.7 2.1 32 86-120 6-37 (232)
227 4id9_A Short-chain dehydrogena 78.6 2.8 9.7E-05 40.1 6.0 32 86-120 19-51 (347)
228 4g65_A TRK system potassium up 78.1 1.6 5.5E-05 45.3 4.3 40 86-130 3-42 (461)
229 2f1k_A Prephenate dehydrogenas 78.0 2 6.9E-05 40.4 4.6 30 87-119 1-30 (279)
230 4dll_A 2-hydroxy-3-oxopropiona 77.8 1.9 6.6E-05 42.0 4.5 32 86-120 31-62 (320)
231 3gg2_A Sugar dehydrogenase, UD 77.7 1.9 6.5E-05 44.7 4.7 33 85-120 1-33 (450)
232 3pef_A 6-phosphogluconate dehy 77.7 2.1 7.1E-05 40.8 4.7 31 87-120 2-32 (287)
233 2h78_A Hibadh, 3-hydroxyisobut 77.7 2 6.7E-05 41.1 4.5 31 87-120 4-34 (302)
234 3dtt_A NADP oxidoreductase; st 77.6 2.1 7.3E-05 40.0 4.6 32 86-120 19-50 (245)
235 3l6d_A Putative oxidoreductase 77.6 1.8 6.2E-05 42.0 4.2 32 86-120 9-40 (306)
236 1yqd_A Sinapyl alcohol dehydro 77.5 2.5 8.6E-05 41.8 5.3 30 88-120 190-219 (366)
237 3d1l_A Putative NADP oxidoredu 77.4 2 6.7E-05 40.3 4.3 32 87-121 11-42 (266)
238 3doj_A AT3G25530, dehydrogenas 77.0 2.1 7.3E-05 41.4 4.6 31 87-120 22-52 (310)
239 3eag_A UDP-N-acetylmuramate:L- 77.0 9.2 0.00031 37.3 9.2 90 87-207 5-95 (326)
240 1leh_A Leucine dehydrogenase; 76.9 3.6 0.00012 41.7 6.3 31 87-121 174-204 (364)
241 3hwr_A 2-dehydropantoate 2-red 76.9 5.7 0.0002 38.6 7.7 30 86-118 19-48 (318)
242 3k92_A NAD-GDH, NAD-specific g 76.9 3 0.0001 43.3 5.9 96 86-207 221-323 (424)
243 2g5c_A Prephenate dehydrogenas 76.8 2.3 7.9E-05 40.1 4.7 32 87-119 2-33 (281)
244 1ygy_A PGDH, D-3-phosphoglycer 76.7 2 7E-05 45.3 4.7 32 86-120 142-173 (529)
245 2zcu_A Uncharacterized oxidore 76.6 1.1 3.9E-05 41.5 2.4 32 88-120 1-33 (286)
246 2raf_A Putative dinucleotide-b 76.2 2.5 8.7E-05 38.6 4.6 30 86-118 19-48 (209)
247 2uyy_A N-PAC protein; long-cha 75.8 2.5 8.4E-05 40.7 4.6 32 86-120 30-61 (316)
248 3h2s_A Putative NADH-flavin re 75.7 2.7 9.3E-05 37.5 4.6 31 87-120 1-32 (224)
249 1jay_A Coenzyme F420H2:NADP+ o 75.5 2.8 9.5E-05 37.7 4.6 31 87-120 1-32 (212)
250 2cvz_A Dehydrogenase, 3-hydrox 75.4 2.1 7.3E-05 40.2 4.0 30 87-120 2-31 (289)
251 2i76_A Hypothetical protein; N 75.2 0.86 2.9E-05 43.5 1.2 23 85-107 1-23 (276)
252 2gf2_A Hibadh, 3-hydroxyisobut 75.1 2.2 7.6E-05 40.4 4.1 31 87-120 1-31 (296)
253 3mw9_A GDH 1, glutamate dehydr 75.1 11 0.00037 40.0 9.5 33 86-121 244-276 (501)
254 2bka_A CC3, TAT-interacting pr 75.0 4.6 0.00016 36.5 6.0 32 87-120 19-52 (242)
255 3d64_A Adenosylhomocysteinase; 74.8 2.5 8.5E-05 44.7 4.6 32 86-120 277-308 (494)
256 1bg6_A N-(1-D-carboxylethyl)-L 74.8 2.7 9.2E-05 40.7 4.7 32 86-120 4-35 (359)
257 4e21_A 6-phosphogluconate dehy 74.7 2.6 9E-05 42.3 4.7 32 86-120 22-53 (358)
258 1i36_A Conserved hypothetical 74.5 2.5 8.6E-05 39.4 4.2 29 87-118 1-29 (264)
259 3i83_A 2-dehydropantoate 2-red 73.7 3.1 0.00011 40.4 4.8 33 85-120 1-33 (320)
260 4b4o_A Epimerase family protei 73.6 3.1 0.00011 39.1 4.7 31 87-120 1-32 (298)
261 1evy_A Glycerol-3-phosphate de 73.2 2.6 8.9E-05 41.5 4.2 33 85-120 13-46 (366)
262 2pv7_A T-protein [includes: ch 73.2 3.3 0.00011 39.9 4.8 32 85-119 20-52 (298)
263 1yqg_A Pyrroline-5-carboxylate 72.3 2.9 9.8E-05 38.9 4.0 31 87-119 1-31 (263)
264 3tri_A Pyrroline-5-carboxylate 72.3 3.1 0.0001 40.0 4.3 34 86-119 3-36 (280)
265 1ff9_A Saccharopine reductase; 72.3 5 0.00017 41.4 6.2 31 87-120 4-34 (450)
266 1v8b_A Adenosylhomocysteinase; 72.2 2.5 8.7E-05 44.5 3.9 32 86-120 257-288 (479)
267 3nep_X Malate dehydrogenase; h 72.0 6.5 0.00022 38.8 6.7 22 87-108 1-22 (314)
268 4gbj_A 6-phosphogluconate dehy 71.8 3 0.0001 40.6 4.1 34 84-120 3-36 (297)
269 3ktd_A Prephenate dehydrogenas 71.8 3.1 0.00011 41.6 4.3 31 87-120 9-39 (341)
270 3pdu_A 3-hydroxyisobutyrate de 71.8 2.4 8.2E-05 40.4 3.4 31 87-120 2-32 (287)
271 3n58_A Adenosylhomocysteinase; 71.7 3.3 0.00011 43.5 4.6 30 87-119 248-277 (464)
272 1ks9_A KPA reductase;, 2-dehyd 71.6 3.7 0.00013 38.3 4.6 31 87-120 1-31 (291)
273 2yjz_A Metalloreductase steap4 74.2 0.81 2.8E-05 42.1 0.0 32 85-119 18-49 (201)
274 3h9u_A Adenosylhomocysteinase; 71.3 3.4 0.00012 43.0 4.6 30 87-119 212-241 (436)
275 1q0q_A 1-deoxy-D-xylulose 5-ph 71.3 4.5 0.00015 41.7 5.4 114 84-208 8-132 (406)
276 1z82_A Glycerol-3-phosphate de 70.7 3.9 0.00013 39.8 4.7 35 83-120 11-45 (335)
277 2wtb_A MFP2, fatty acid multif 70.3 4.6 0.00016 44.4 5.6 31 87-120 313-343 (725)
278 4h7p_A Malate dehydrogenase; s 70.3 7.3 0.00025 39.1 6.7 27 81-107 18-46 (345)
279 4g65_A TRK system potassium up 70.3 2 6.9E-05 44.5 2.7 92 88-206 237-331 (461)
280 3hn2_A 2-dehydropantoate 2-red 69.9 3.4 0.00012 39.9 4.1 33 85-120 1-33 (312)
281 1np3_A Ketol-acid reductoisome 69.6 3.7 0.00013 40.5 4.3 31 87-120 17-47 (338)
282 3qsg_A NAD-binding phosphogluc 69.2 3.4 0.00012 40.1 3.9 31 86-119 24-55 (312)
283 2gn4_A FLAA1 protein, UDP-GLCN 68.5 8.1 0.00028 37.6 6.5 32 87-120 22-55 (344)
284 2iz1_A 6-phosphogluconate dehy 68.4 3.7 0.00013 42.6 4.2 32 86-120 5-36 (474)
285 3r6d_A NAD-dependent epimerase 68.4 4.9 0.00017 36.0 4.5 31 87-120 5-38 (221)
286 1c1d_A L-phenylalanine dehydro 68.1 4.5 0.00015 40.9 4.6 31 87-121 176-206 (355)
287 3gpi_A NAD-dependent epimerase 68.1 4.4 0.00015 37.8 4.3 31 87-120 4-34 (286)
288 2rcy_A Pyrroline carboxylate r 67.8 3 0.0001 38.8 3.0 22 87-108 5-26 (262)
289 3oj0_A Glutr, glutamyl-tRNA re 67.5 2.3 8E-05 36.1 2.1 31 86-119 21-51 (144)
290 3vps_A TUNA, NAD-dependent epi 67.3 5 0.00017 37.6 4.5 33 85-120 6-39 (321)
291 2ydy_A Methionine adenosyltran 67.2 5.2 0.00018 37.7 4.6 32 85-119 1-33 (315)
292 2a35_A Hypothetical protein PA 67.0 4.2 0.00014 35.9 3.7 35 85-120 4-39 (215)
293 2dq4_A L-threonine 3-dehydroge 67.0 6.6 0.00023 38.2 5.5 29 88-119 167-196 (343)
294 3ldh_A Lactate dehydrogenase; 66.9 8.9 0.00031 38.3 6.5 22 87-108 22-43 (330)
295 1uuf_A YAHK, zinc-type alcohol 65.9 5 0.00017 39.8 4.4 30 88-120 197-226 (369)
296 3g17_A Similar to 2-dehydropan 65.9 3.2 0.00011 39.8 2.9 32 85-119 1-32 (294)
297 3dfz_A SIRC, precorrin-2 dehyd 65.9 14 0.00046 34.9 7.2 31 87-120 32-62 (223)
298 3gvp_A Adenosylhomocysteinase 65.6 5.3 0.00018 41.6 4.6 30 87-119 221-250 (435)
299 1e6u_A GDP-fucose synthetase; 65.4 6.7 0.00023 37.0 5.0 31 86-119 3-34 (321)
300 2csu_A 457AA long hypothetical 64.9 17 0.00059 37.5 8.4 82 87-206 9-94 (457)
301 2pgd_A 6-phosphogluconate dehy 64.6 5 0.00017 41.7 4.3 31 87-120 3-33 (482)
302 4ej6_A Putative zinc-binding d 64.5 4.9 0.00017 39.8 4.1 29 88-119 185-214 (370)
303 3c7a_A Octopine dehydrogenase; 64.5 5.2 0.00018 39.9 4.3 33 85-119 1-33 (404)
304 2izz_A Pyrroline-5-carboxylate 64.2 4.9 0.00017 39.1 3.9 35 86-120 22-57 (322)
305 3goh_A Alcohol dehydrogenase, 63.9 5.6 0.00019 38.2 4.2 30 87-119 144-173 (315)
306 1txg_A Glycerol-3-phosphate de 63.9 5.3 0.00018 38.3 4.0 31 87-120 1-31 (335)
307 2cf5_A Atccad5, CAD, cinnamyl 63.6 4 0.00014 40.1 3.2 30 88-120 183-212 (357)
308 1f0y_A HCDH, L-3-hydroxyacyl-C 63.6 7.1 0.00024 37.3 4.9 31 87-120 16-46 (302)
309 3m6i_A L-arabinitol 4-dehydrog 63.5 6.1 0.00021 38.7 4.5 29 88-119 182-211 (363)
310 3kkj_A Amine oxidase, flavin-c 63.1 6.9 0.00024 33.5 4.2 33 85-120 1-33 (336)
311 3slg_A PBGP3 protein; structur 63.0 5.3 0.00018 38.7 3.9 34 86-121 24-58 (372)
312 3ip1_A Alcohol dehydrogenase, 63.0 15 0.00052 36.6 7.4 29 88-119 216-245 (404)
313 4gwg_A 6-phosphogluconate dehy 63.0 5.6 0.00019 41.8 4.3 32 86-120 4-35 (484)
314 1ek6_A UDP-galactose 4-epimera 62.9 6.6 0.00023 37.5 4.5 33 85-120 1-34 (348)
315 3obb_A Probable 3-hydroxyisobu 62.9 6.6 0.00022 38.3 4.5 32 85-120 3-34 (300)
316 1pgj_A 6PGDH, 6-PGDH, 6-phosph 62.9 5.6 0.00019 41.3 4.3 31 87-120 2-32 (478)
317 3jv7_A ADH-A; dehydrogenase, n 62.8 7.5 0.00026 37.7 4.9 31 88-120 174-204 (345)
318 3st7_A Capsular polysaccharide 62.6 6.7 0.00023 38.1 4.6 44 87-132 1-45 (369)
319 2x4g_A Nucleoside-diphosphate- 62.1 7.6 0.00026 36.8 4.8 31 87-120 14-45 (342)
320 2y1e_A 1-deoxy-D-xylulose 5-ph 61.8 8.8 0.0003 39.5 5.3 110 87-207 22-135 (398)
321 3nkl_A UDP-D-quinovosamine 4-d 61.6 9.4 0.00032 31.9 4.8 33 87-121 5-37 (141)
322 2fp4_A Succinyl-COA ligase [GD 61.5 8.2 0.00028 37.9 5.0 84 88-206 15-101 (305)
323 2q3e_A UDP-glucose 6-dehydroge 61.5 5.4 0.00019 41.1 3.9 33 87-120 6-38 (467)
324 2d8a_A PH0655, probable L-thre 61.3 9.2 0.00031 37.2 5.3 29 88-119 170-199 (348)
325 2aef_A Calcium-gated potassium 61.2 4.6 0.00016 37.0 3.0 30 86-119 9-38 (234)
326 1lld_A L-lactate dehydrogenase 61.1 7.7 0.00026 37.2 4.7 31 86-119 7-39 (319)
327 3phh_A Shikimate dehydrogenase 60.8 48 0.0016 31.9 10.2 32 87-121 119-150 (269)
328 2p4q_A 6-phosphogluconate dehy 60.8 6.4 0.00022 41.3 4.3 35 83-120 7-41 (497)
329 3uog_A Alcohol dehydrogenase; 60.5 15 0.0005 36.1 6.7 30 88-120 192-221 (363)
330 2yy7_A L-threonine dehydrogena 60.3 5.2 0.00018 37.5 3.2 35 85-120 1-36 (312)
331 1mv8_A GMD, GDP-mannose 6-dehy 60.3 7.2 0.00025 39.7 4.5 30 87-119 1-30 (436)
332 1ur5_A Malate dehydrogenase; o 59.7 8.7 0.0003 37.4 4.8 34 85-121 1-34 (309)
333 1piw_A Hypothetical zinc-type 59.6 6.3 0.00022 38.7 3.8 30 88-120 182-211 (360)
334 4e12_A Diketoreductase; oxidor 59.6 8.6 0.00029 36.6 4.6 30 87-119 5-34 (283)
335 2zyd_A 6-phosphogluconate dehy 59.4 7.1 0.00024 40.7 4.3 32 86-120 15-46 (480)
336 3fpc_A NADP-dependent alcohol 59.0 5.9 0.0002 38.7 3.4 29 88-119 169-198 (352)
337 3ruf_A WBGU; rossmann fold, UD 58.7 9.2 0.00031 36.6 4.7 33 86-121 25-58 (351)
338 4f6c_A AUSA reductase domain p 58.3 44 0.0015 33.1 9.8 32 87-121 70-102 (427)
339 3uko_A Alcohol dehydrogenase c 58.2 12 0.00042 36.8 5.7 29 88-119 196-225 (378)
340 2vhw_A Alanine dehydrogenase; 58.2 8.8 0.0003 38.5 4.6 32 86-120 168-199 (377)
341 1pl8_A Human sorbitol dehydrog 57.9 16 0.00056 35.6 6.4 29 88-119 174-203 (356)
342 2o3j_A UDP-glucose 6-dehydroge 57.8 7.9 0.00027 40.2 4.3 34 85-119 8-41 (481)
343 1xq6_A Unknown protein; struct 57.7 11 0.00038 33.7 4.9 34 86-120 4-38 (253)
344 2d5c_A AROE, shikimate 5-dehyd 57.6 8.7 0.0003 36.1 4.2 30 88-120 118-147 (263)
345 3ghy_A Ketopantoate reductase 57.5 8.8 0.0003 37.4 4.4 30 87-119 4-33 (335)
346 3ce6_A Adenosylhomocysteinase; 57.3 8.9 0.00031 40.4 4.6 30 87-119 275-304 (494)
347 1vj0_A Alcohol dehydrogenase, 57.0 10 0.00035 37.5 4.9 31 88-120 198-228 (380)
348 1yj8_A Glycerol-3-phosphate de 56.2 6.2 0.00021 39.1 3.1 24 85-108 20-43 (375)
349 1vl0_A DTDP-4-dehydrorhamnose 55.9 13 0.00044 34.5 5.1 30 87-119 13-43 (292)
350 3q2o_A Phosphoribosylaminoimid 55.6 10 0.00036 37.5 4.6 31 87-120 15-45 (389)
351 4hv4_A UDP-N-acetylmuramate--L 55.4 30 0.001 35.9 8.2 83 87-201 23-106 (494)
352 3k96_A Glycerol-3-phosphate de 55.1 10 0.00035 37.9 4.5 32 85-119 28-59 (356)
353 2ph5_A Homospermidine synthase 54.6 7.2 0.00024 41.1 3.3 93 86-207 13-112 (480)
354 1t2a_A GDP-mannose 4,6 dehydra 54.3 12 0.00039 36.4 4.6 33 85-120 23-56 (375)
355 4dvj_A Putative zinc-dependent 54.2 6.9 0.00024 38.6 3.0 91 87-201 173-264 (363)
356 1x13_A NAD(P) transhydrogenase 54.1 11 0.00038 38.2 4.6 32 86-120 172-203 (401)
357 1gpj_A Glutamyl-tRNA reductase 54.0 9.2 0.00032 38.7 4.0 31 87-120 168-199 (404)
358 3zwc_A Peroxisomal bifunctiona 53.8 12 0.0004 41.4 5.1 148 87-258 317-487 (742)
359 4b8w_A GDP-L-fucose synthase; 53.7 9.6 0.00033 35.2 3.8 24 85-108 5-29 (319)
360 2rh8_A Anthocyanidin reductase 53.5 12 0.00042 35.4 4.6 32 85-119 8-40 (338)
361 3mwd_B ATP-citrate synthase; A 53.4 22 0.00074 35.6 6.5 96 87-209 11-114 (334)
362 3ay3_A NAD-dependent epimerase 53.3 5.8 0.0002 36.6 2.2 32 85-119 1-33 (267)
363 3s2e_A Zinc-containing alcohol 52.5 9.7 0.00033 36.8 3.8 30 88-120 169-198 (340)
364 4aj2_A L-lactate dehydrogenase 52.1 20 0.0007 35.6 6.1 23 86-108 19-41 (331)
365 1rjw_A ADH-HT, alcohol dehydro 52.1 19 0.00066 34.8 5.8 31 87-120 166-196 (339)
366 1n2s_A DTDP-4-, DTDP-glucose o 51.7 14 0.00048 34.2 4.6 30 87-120 1-31 (299)
367 1l7d_A Nicotinamide nucleotide 51.4 13 0.00045 37.2 4.6 32 86-120 172-203 (384)
368 1e3j_A NADP(H)-dependent ketos 51.3 29 0.00098 33.7 6.9 29 88-119 171-199 (352)
369 3p2y_A Alanine dehydrogenase/p 51.2 11 0.00037 38.5 3.9 32 86-120 184-215 (381)
370 3ko8_A NAD-dependent epimerase 51.2 14 0.00049 34.4 4.6 31 87-120 1-32 (312)
371 1n7h_A GDP-D-mannose-4,6-dehyd 50.9 14 0.00048 35.8 4.6 33 85-120 27-60 (381)
372 1f8f_A Benzyl alcohol dehydrog 50.8 10 0.00036 37.2 3.7 29 88-119 193-222 (371)
373 2c20_A UDP-glucose 4-epimerase 50.8 15 0.0005 34.7 4.6 31 87-120 2-33 (330)
374 1xa0_A Putative NADPH dependen 50.7 24 0.00082 33.8 6.2 30 88-120 152-182 (328)
375 2jhf_A Alcohol dehydrogenase E 50.6 26 0.00089 34.3 6.6 29 88-119 194-223 (374)
376 2b5w_A Glucose dehydrogenase; 50.0 19 0.00064 35.2 5.4 31 87-120 174-207 (357)
377 3orq_A N5-carboxyaminoimidazol 50.0 19 0.00065 35.6 5.5 32 86-120 12-43 (377)
378 1rpn_A GDP-mannose 4,6-dehydra 49.9 16 0.00053 34.6 4.7 34 85-121 13-47 (335)
379 3qwb_A Probable quinone oxidor 49.5 18 0.0006 34.9 5.0 30 88-120 151-181 (334)
380 3lk7_A UDP-N-acetylmuramoylala 49.5 55 0.0019 33.3 9.0 88 87-207 10-101 (451)
381 1e3i_A Alcohol dehydrogenase, 49.4 21 0.00072 35.0 5.7 29 88-119 198-227 (376)
382 2r85_A PURP protein PF1517; AT 49.2 15 0.0005 34.9 4.4 32 85-120 1-32 (334)
383 1x0v_A GPD-C, GPDH-C, glycerol 49.1 11 0.00036 36.7 3.4 23 86-108 8-30 (354)
384 1orr_A CDP-tyvelose-2-epimeras 49.0 16 0.00055 34.5 4.6 31 87-120 2-33 (347)
385 1pjq_A CYSG, siroheme synthase 49.0 36 0.0012 35.0 7.6 93 87-210 13-107 (457)
386 3pid_A UDP-glucose 6-dehydroge 48.9 15 0.00051 38.0 4.6 37 87-129 37-73 (432)
387 1p0f_A NADP-dependent alcohol 48.9 20 0.00068 35.2 5.4 29 88-119 194-223 (373)
388 1smk_A Malate dehydrogenase, g 48.8 14 0.00046 36.4 4.1 33 85-118 7-40 (326)
389 2hk9_A Shikimate dehydrogenase 48.8 13 0.00044 35.4 3.9 31 87-120 130-160 (275)
390 4gx0_A TRKA domain protein; me 48.1 14 0.00048 38.6 4.4 31 87-120 349-379 (565)
391 2c5a_A GDP-mannose-3', 5'-epim 48.1 17 0.00057 35.5 4.7 32 86-120 29-61 (379)
392 3krt_A Crotonyl COA reductase; 48.0 20 0.00067 36.5 5.4 38 88-130 231-269 (456)
393 2eez_A Alanine dehydrogenase; 48.0 16 0.00055 36.3 4.6 32 86-120 166-197 (369)
394 1dlj_A UDP-glucose dehydrogena 47.8 14 0.00049 37.2 4.2 30 87-120 1-30 (402)
395 4dio_A NAD(P) transhydrogenase 47.7 16 0.00055 37.5 4.6 31 86-119 190-220 (405)
396 1hyh_A L-hicdh, L-2-hydroxyiso 47.7 14 0.00047 35.7 4.0 32 87-119 2-33 (309)
397 1zej_A HBD-9, 3-hydroxyacyl-CO 47.1 18 0.0006 35.4 4.6 40 86-131 12-51 (293)
398 3au8_A 1-deoxy-D-xylulose 5-ph 46.9 17 0.00058 38.2 4.6 114 87-208 78-204 (488)
399 2y0c_A BCEC, UDP-glucose dehyd 46.8 17 0.00058 37.8 4.7 31 86-119 8-38 (478)
400 1y7t_A Malate dehydrogenase; N 46.3 16 0.00056 35.4 4.3 34 86-119 4-42 (327)
401 2vn8_A Reticulon-4-interacting 46.3 17 0.00058 35.8 4.4 29 88-119 186-215 (375)
402 3o8q_A Shikimate 5-dehydrogena 46.1 48 0.0016 31.9 7.5 31 87-120 127-158 (281)
403 3jyn_A Quinone oxidoreductase; 46.0 14 0.00049 35.5 3.7 30 88-120 143-173 (325)
404 2fzw_A Alcohol dehydrogenase c 45.9 23 0.00078 34.7 5.3 29 88-119 193-222 (373)
405 3fbg_A Putative arginate lyase 45.7 16 0.00053 35.6 4.0 30 88-120 153-183 (346)
406 2hun_A 336AA long hypothetical 45.5 17 0.00059 34.3 4.2 33 87-120 4-37 (336)
407 1cdo_A Alcohol dehydrogenase; 45.5 30 0.001 33.9 6.1 29 88-119 195-224 (374)
408 2dph_A Formaldehyde dismutase; 45.3 31 0.001 34.2 6.2 29 88-119 188-217 (398)
409 3d7l_A LIN1944 protein; APC893 45.0 20 0.00067 31.4 4.2 29 87-119 4-33 (202)
410 1sb8_A WBPP; epimerase, 4-epim 45.0 21 0.00071 34.2 4.8 31 87-120 28-59 (352)
411 2p5y_A UDP-glucose 4-epimerase 44.8 21 0.00072 33.4 4.7 31 87-120 1-32 (311)
412 2q1w_A Putative nucleotide sug 44.7 21 0.00071 34.0 4.7 31 87-120 22-53 (333)
413 2dpo_A L-gulonate 3-dehydrogen 44.7 19 0.00066 35.3 4.5 39 87-130 7-45 (319)
414 2ewd_A Lactate dehydrogenase,; 44.5 17 0.00058 35.2 4.0 31 86-118 4-34 (317)
415 2bll_A Protein YFBG; decarboxy 44.4 21 0.00072 33.7 4.6 32 87-120 1-33 (345)
416 3oh8_A Nucleoside-diphosphate 44.1 19 0.00066 37.1 4.6 31 87-120 148-179 (516)
417 3enk_A UDP-glucose 4-epimerase 43.8 22 0.00077 33.5 4.7 32 86-120 5-37 (341)
418 1a5z_A L-lactate dehydrogenase 43.2 18 0.0006 35.3 3.9 30 87-119 1-32 (319)
419 3h5n_A MCCB protein; ubiquitin 42.9 11 0.00039 37.5 2.6 24 86-109 118-141 (353)
420 2cdc_A Glucose dehydrogenase g 42.9 17 0.00058 35.6 3.8 31 87-120 182-212 (366)
421 4a2c_A Galactitol-1-phosphate 42.6 27 0.00093 33.5 5.2 22 88-109 163-184 (346)
422 4gx0_A TRKA domain protein; me 42.5 19 0.00064 37.6 4.3 35 83-120 124-158 (565)
423 3nx4_A Putative oxidoreductase 42.4 28 0.00095 33.2 5.2 30 88-120 149-179 (324)
424 3mog_A Probable 3-hydroxybutyr 42.3 19 0.00065 37.5 4.2 30 87-119 6-35 (483)
425 2x6t_A ADP-L-glycero-D-manno-h 41.9 21 0.00073 34.2 4.3 33 87-121 47-80 (357)
426 1oc2_A DTDP-glucose 4,6-dehydr 41.8 19 0.00065 34.2 3.9 33 87-120 5-38 (348)
427 4hb9_A Similarities with proba 41.8 24 0.00082 33.9 4.6 31 87-120 2-32 (412)
428 1r6d_A TDP-glucose-4,6-dehydra 41.5 25 0.00084 33.3 4.6 34 87-120 1-38 (337)
429 3gqv_A Enoyl reductase; medium 41.4 38 0.0013 33.3 6.1 30 87-119 166-196 (371)
430 1iow_A DD-ligase, DDLB, D-ALA\ 41.2 25 0.00087 32.7 4.6 33 85-120 1-42 (306)
431 3k6j_A Protein F01G10.3, confi 40.6 41 0.0014 35.0 6.4 31 87-120 55-85 (460)
432 1udb_A Epimerase, UDP-galactos 40.3 26 0.0009 33.1 4.6 30 87-119 1-31 (338)
433 1kjq_A GART 2, phosphoribosylg 40.1 29 0.00098 33.9 5.0 33 85-120 10-42 (391)
434 1i24_A Sulfolipid biosynthesis 40.0 27 0.00091 33.9 4.7 31 87-120 12-43 (404)
435 3hyw_A Sulfide-quinone reducta 39.7 88 0.003 31.2 8.6 36 85-121 1-36 (430)
436 3tqh_A Quinone oxidoreductase; 39.5 35 0.0012 32.6 5.4 29 88-119 155-184 (321)
437 1kew_A RMLB;, DTDP-D-glucose 4 39.3 23 0.00078 33.8 4.0 32 87-120 1-33 (361)
438 2q1s_A Putative nucleotide sug 38.8 27 0.00091 34.0 4.5 32 87-120 33-65 (377)
439 4dup_A Quinone oxidoreductase; 38.8 28 0.00096 33.9 4.6 29 88-119 170-199 (353)
440 2v6b_A L-LDH, L-lactate dehydr 38.2 29 0.001 33.5 4.6 29 87-118 1-31 (304)
441 2pzm_A Putative nucleotide sug 38.2 31 0.0011 32.7 4.8 31 87-120 21-52 (330)
442 2eih_A Alcohol dehydrogenase; 38.2 50 0.0017 31.8 6.3 31 87-120 168-199 (343)
443 1y1p_A ARII, aldehyde reductas 37.5 31 0.001 32.4 4.5 31 87-120 12-43 (342)
444 2hjr_A Malate dehydrogenase; m 37.4 31 0.0011 33.8 4.7 25 85-109 13-37 (328)
445 2i99_A MU-crystallin homolog; 37.3 20 0.00067 34.9 3.2 23 86-108 135-157 (312)
446 2pk3_A GDP-6-deoxy-D-LYXO-4-he 37.1 32 0.0011 32.1 4.6 31 87-120 13-44 (321)
447 1lnq_A MTHK channels, potassiu 36.9 19 0.00064 34.9 3.0 35 87-127 116-150 (336)
448 2hrz_A AGR_C_4963P, nucleoside 36.5 33 0.0011 32.4 4.6 23 86-108 14-37 (342)
449 3hhp_A Malate dehydrogenase; M 36.4 20 0.00069 35.2 3.2 22 87-108 1-23 (312)
450 2dwc_A PH0318, 433AA long hypo 36.3 35 0.0012 34.1 4.9 33 85-120 18-50 (433)
451 3g79_A NDP-N-acetyl-D-galactos 36.3 30 0.001 36.1 4.6 33 86-120 18-51 (478)
452 2z1m_A GDP-D-mannose dehydrata 36.2 34 0.0011 32.1 4.6 31 87-120 4-35 (345)
453 1rkx_A CDP-glucose-4,6-dehydra 36.0 33 0.0011 32.7 4.6 31 87-120 10-41 (357)
454 3sxp_A ADP-L-glycero-D-mannohe 35.8 36 0.0012 32.7 4.8 32 86-120 10-44 (362)
455 1eq2_A ADP-L-glycero-D-mannohe 35.7 32 0.0011 31.8 4.3 32 88-121 1-33 (310)
456 1ldn_A L-lactate dehydrogenase 35.6 28 0.00094 33.9 4.0 32 86-118 6-37 (316)
457 1db3_A GDP-mannose 4,6-dehydra 35.5 35 0.0012 32.6 4.7 31 87-120 2-33 (372)
458 2jl1_A Triphenylmethane reduct 35.3 20 0.00068 33.0 2.8 32 88-120 2-34 (287)
459 3ehe_A UDP-glucose 4-epimerase 35.2 27 0.00094 32.6 3.8 30 87-120 2-32 (313)
460 1omo_A Alanine dehydrogenase; 35.2 36 0.0012 33.2 4.8 33 87-121 126-158 (322)
461 2ggs_A 273AA long hypothetical 35.2 28 0.00097 31.6 3.8 30 87-120 1-31 (273)
462 2v6g_A Progesterone 5-beta-red 35.0 24 0.00082 33.6 3.4 34 87-120 2-38 (364)
463 1gy8_A UDP-galactose 4-epimera 34.8 37 0.0012 32.9 4.7 31 87-120 3-35 (397)
464 1o9a_B FNBB, fibronectin bindi 34.8 6.4 0.00022 26.4 -0.5 21 387-407 13-33 (36)
465 3gvi_A Malate dehydrogenase; N 34.7 36 0.0012 33.6 4.7 30 86-118 7-37 (324)
466 1zcj_A Peroxisomal bifunctiona 34.7 34 0.0012 35.2 4.7 30 87-119 38-67 (463)
467 4a0s_A Octenoyl-COA reductase/ 34.7 38 0.0013 34.0 5.0 30 87-119 222-252 (447)
468 1tt7_A YHFP; alcohol dehydroge 34.5 18 0.0006 34.8 2.3 30 88-120 153-183 (330)
469 3pqe_A L-LDH, L-lactate dehydr 34.4 29 0.00099 34.3 4.0 32 86-119 5-37 (326)
470 3fbs_A Oxidoreductase; structu 34.2 42 0.0014 30.5 4.8 33 85-120 1-33 (297)
471 3fr7_A Putative ketol-acid red 33.8 29 0.001 36.9 4.0 22 87-108 55-76 (525)
472 1yvv_A Amine oxidase, flavin-c 33.7 35 0.0012 32.0 4.2 33 85-120 1-33 (336)
473 3tl2_A Malate dehydrogenase; c 33.6 39 0.0013 33.1 4.7 29 87-118 9-38 (315)
474 1wly_A CAAR, 2-haloacrylate re 33.5 42 0.0014 32.1 4.9 30 88-120 148-178 (333)
475 1y6j_A L-lactate dehydrogenase 33.4 36 0.0012 33.2 4.4 23 86-108 7-29 (318)
476 1pjc_A Protein (L-alanine dehy 33.3 38 0.0013 33.5 4.6 31 87-120 168-198 (361)
477 3ihm_A Styrene monooxygenase A 33.2 32 0.0011 34.4 4.1 37 81-120 17-53 (430)
478 3p7m_A Malate dehydrogenase; p 33.2 41 0.0014 33.0 4.8 32 86-119 5-36 (321)
479 4ffl_A PYLC; amino acid, biosy 32.7 41 0.0014 32.6 4.7 30 88-120 3-32 (363)
480 3gms_A Putative NADPH:quinone 32.3 20 0.00068 34.7 2.3 30 88-120 147-177 (340)
481 1guz_A Malate dehydrogenase; o 31.9 47 0.0016 32.1 4.9 32 87-119 1-32 (310)
482 1t2d_A LDH-P, L-lactate dehydr 31.8 44 0.0015 32.7 4.8 32 87-121 5-36 (322)
483 2gv8_A Monooxygenase; FMO, FAD 31.7 1.3E+02 0.0045 29.9 8.4 73 88-185 214-289 (447)
484 2q7v_A Thioredoxin reductase; 31.7 2.5E+02 0.0087 25.9 10.0 30 87-119 153-182 (325)
485 3ado_A Lambda-crystallin; L-gu 31.7 41 0.0014 33.3 4.5 28 88-118 8-35 (319)
486 2p4h_X Vestitone reductase; NA 31.1 46 0.0016 31.0 4.6 29 88-119 3-32 (322)
487 1oju_A MDH, malate dehydrogena 31.1 36 0.0012 33.1 3.9 22 87-108 1-22 (294)
488 3iup_A Putative NADPH:quinone 31.1 48 0.0016 32.7 4.9 29 88-119 173-203 (379)
489 3ond_A Adenosylhomocysteinase; 31.0 42 0.0014 35.3 4.6 29 87-118 266-294 (488)
490 2egg_A AROE, shikimate 5-dehyd 30.5 47 0.0016 32.0 4.6 31 87-120 142-173 (297)
491 2xve_A Flavin-containing monoo 30.3 1.4E+02 0.0048 30.1 8.4 74 88-185 199-273 (464)
492 1mld_A Malate dehydrogenase; o 30.2 45 0.0015 32.5 4.5 22 87-108 1-23 (314)
493 1b8p_A Protein (malate dehydro 30.2 43 0.0015 32.7 4.3 23 86-108 5-28 (329)
494 3hn7_A UDP-N-acetylmuramate-L- 30.2 1.7E+02 0.0058 30.4 9.2 88 87-207 20-109 (524)
495 1qor_A Quinone oxidoreductase; 29.9 37 0.0013 32.4 3.8 29 88-119 143-172 (327)
496 1pzg_A LDH, lactate dehydrogen 29.8 35 0.0012 33.5 3.6 23 86-108 9-31 (331)
497 2dkn_A 3-alpha-hydroxysteroid 29.7 53 0.0018 29.3 4.6 30 88-120 3-33 (255)
498 4a27_A Synaptic vesicle membra 29.4 20 0.00069 34.8 1.8 30 88-119 145-175 (349)
499 3d0o_A L-LDH 1, L-lactate dehy 29.4 33 0.0011 33.4 3.3 23 86-108 6-28 (317)
500 4a7p_A UDP-glucose dehydrogena 29.2 48 0.0016 34.2 4.7 32 86-120 8-39 (446)
No 1
>3doc_A Glyceraldehyde 3-phosphate dehydrogenase; ssgcid, structural genomics, PSI, protein structure initiative; HET: NAD; 2.40A {Brucella melitensis biovar ABORTUS2308} PDB: 3l0d_A*
Probab=100.00 E-value=4e-120 Score=914.81 Aligned_cols=333 Identities=52% Similarity=0.825 Sum_probs=324.1
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeC
Q 012940 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (453)
Q Consensus 85 m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~ 164 (453)
|++||||||||||||+++|+++++..++++||||||+.++++++|||||||+||+|+++++. ++++|.|||++|+++++
T Consensus 1 m~~kv~INGfGrIGr~v~Ra~~~~~~~~~~ivaiNd~~d~~~~a~l~kyDS~hG~f~~~v~~-~~~~l~i~Gk~I~v~~e 79 (335)
T 3doc_A 1 MAVRVAINGFGRIGRNILRAIVESGRTDIQVVAINDLGPVETNAHLLRYDSVHGRFPKEVEV-AGDTIDVGYGPIKVHAV 79 (335)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCSEEEEEEECSSCHHHHHHHHHEETTTEECSSCCEE-CSSEEESSSSEEEEECC
T ss_pred CCEEEEEECCCcHHHHHHHHHHhccCCCeEEEEEeCCCCHHHHHHHhcccCCCCCCCCeEEE-ecCEEEECCEEEEEEee
Confidence 67899999999999999999998733569999999999999999999999999999999997 78999999999999999
Q ss_pred CCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEeccCccccCccCCeEEecCCcchhh
Q 012940 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNC 244 (453)
Q Consensus 165 ~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISaps~d~dvPtvV~gVN~~~~~~~~~~IVSnaSCTTn~ 244 (453)
++|+++||+++|+||||||||.|+++|+|++|+++||||||||+|+++ ++||||||||++.|++. ++|||||||||||
T Consensus 80 ~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~d-~~p~vV~gVN~~~~~~~-~~IISNasCTTn~ 157 (335)
T 3doc_A 80 RNPAELPWKEENVDIALECTGIFTSRDKAALHLEAGAKRVIVSAPADG-ADLTVVYGVNNDKLTKD-HLVISNASCTTNC 157 (335)
T ss_dssp SSTTSSCTTTTTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCTT-CSEECCTTTTGGGCCTT-CCEEECCCHHHHH
T ss_pred cccccccccccCCCEEEEccCccCCHHHHHHHHHcCCCEEEECCCCCC-CCCEEecccCHHHhCcc-CCeEecCchhhhh
Confidence 999999999999999999999999999999999999999999999986 57999999999999875 7999999999999
Q ss_pred hhhHHHHHhhhcCeeEEEEEeeeccccchhhhccccccchhhhhhhhccccCCCchhHHHHhhccccCCceeEEEEEeee
Q 012940 245 LAPFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVMPQLKGKLNGIALRVPT 324 (453)
Q Consensus 245 Lapvlk~L~d~fGI~~~~mTTiha~Tg~Q~llD~~~~d~rr~Raaa~NIIPt~tGaakav~kVlPeL~gKisgtavRVPv 324 (453)
|+|++|+|||+|||++++|||||++|++|+++|++++||||+|++++||||++||++|+++||||+|+|||+|+|+||||
T Consensus 158 Lap~lk~L~d~fGI~~g~mTTvha~T~~q~~~D~p~kd~r~~r~aa~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv 237 (335)
T 3doc_A 158 LAPVAQVLNDTIGIEKGFMTTIHSYTGDQPTLDTMHKDLYRARAAALSMIPTSTGAAKAVGLVLPELKGKLDGVAIRVPT 237 (335)
T ss_dssp HHHHHHHHHHHTCEEEEEEEEEEECCTTSCSSCCCCSSTTTTSCTTSSCEEEECCHHHHHHHHSGGGTTCEEEEEEEESC
T ss_pred hHHhHHHHHHHcCEEEEEEEeeeeccchhhhhcCccccccccccCcceEecCCCchHHHHHHhccccCCCEEEEEEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCcceeecccCeEeecCCCCCcceEEeCCCCceecCCeEEEEEEecC
Q 012940 325 PNVSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDN 404 (453)
Q Consensus 325 ~~gs~vdltv~lek~~vt~eeI~~al~~aa~~~lkgil~~~~~~~VS~Df~~~~~S~i~D~~~t~v~~~~~vKl~~WYDN 404 (453)
++||++||+++|+|+ +++|||+++|+++++|+|||||+|+|+|+||+||+|++||+|||+.+|++++++|+||++||||
T Consensus 238 ~~~s~~dlt~~lek~-~t~eei~~~lk~A~~g~lkgil~yte~~~VS~Df~~~~~ssi~d~~~t~~~~~~~vk~~~WYDN 316 (335)
T 3doc_A 238 PNVSVVDLTFIAKRE-TTVEEVNNAIREAANGRLKGILGYTDEKLVSHDFNHDSHSSVFHTDQTKVMDGTMVRILSWYDN 316 (335)
T ss_dssp SSCEEEEEEEEESSC-CCHHHHHHHHHHHHTTTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEEETTTEEEEEEEECT
T ss_pred ccccceEEEEEECCC-CCHHHHHHHHHHhhcCCcCCeeEEEcCCeEeeeeCCCCCccccCchhhEEEcCCEEEEEEEEcC
Confidence 999999999999998 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchhhhHHHHHHHHHh
Q 012940 405 EWGYSQRVVDLAHLVAT 421 (453)
Q Consensus 405 E~GYs~r~vdl~~~~~~ 421 (453)
||||||||+||+.||++
T Consensus 317 E~gys~r~~dl~~~~~~ 333 (335)
T 3doc_A 317 EWGFSSRMSDTAVALGK 333 (335)
T ss_dssp THHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHh
Confidence 99999999999999986
No 2
>4dib_A GAPDH, glyceraldehyde 3-phosphate dehydrogenase; niaid, structural genomics, national institute of allergy AN infectious diseases; 2.55A {Bacillus anthracis}
Probab=100.00 E-value=4.2e-120 Score=916.40 Aligned_cols=334 Identities=54% Similarity=0.877 Sum_probs=311.8
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeCC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~~ 165 (453)
++||||||||||||+++|+++++ ++++||||||+.++++++|||||||+||+|+++++. ++++|.|||++|+|++++
T Consensus 4 ~~kv~INGfGrIGr~v~Ra~~~~--~~~~ivaINd~~d~~~~a~llkyDS~hG~f~~~v~~-~~~~l~inGk~I~v~~e~ 80 (345)
T 4dib_A 4 MTRVAINGFGRIGRMVFRQAIKE--SAFEIVAINASYPSETLAHLIKYDTVHGKFDGTVEA-FEDHLLVDGKMIRLLNNR 80 (345)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTC--SSSEEEEEECSSCHHHHHHHHHEETTTEECSSCEEE-CSSEEEETTEEEEEECCS
T ss_pred cEEEEEECCCcHHHHHHHHHHhC--CCceEEEEcCCCCHHHHHHHhcccCCCCCCCCcEEE-cCCEEEECCEEEEEeecC
Confidence 58999999999999999999987 469999999999999999999999999999999997 789999999999999999
Q ss_pred CCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEeccCccccCccCCeEEecCCcchhhh
Q 012940 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCL 245 (453)
Q Consensus 166 dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISaps~d~dvPtvV~gVN~~~~~~~~~~IVSnaSCTTn~L 245 (453)
+|+++||+++|+||||||||.|+++|+|++|+++||||||||+|+++ |+||||||||++.|++..++||||||||||||
T Consensus 81 dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~~-d~p~vV~gVN~~~~~~~~~~IISNaSCTTn~L 159 (345)
T 4dib_A 81 DPKELPWTDLGVEVVIEATGKFNSKEKAILHVEAGAKKVILTAPGKN-EDVTIVVGVNEDQLDITKHTVISNASCTTNCL 159 (345)
T ss_dssp CGGGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBS-CSEECCTTTTGGGCCTTTCSEEECCCHHHHHH
T ss_pred ChhhCCccccCccEEEEeccCcCCHHHHHHHHHCCCCEEEECCCCCC-CCCEEEecCCHHHcCcccCeEEECCchhhhhh
Confidence 99999999999999999999999999999999999999999999975 78999999999999873379999999999999
Q ss_pred hhHHHHHhhhcCeeEEEEEeeeccccchhhhccccccchhhhhhhhccccCCCchhHHHHhhccccCCceeEEEEEeeec
Q 012940 246 APFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVMPQLKGKLNGIALRVPTP 325 (453)
Q Consensus 246 apvlk~L~d~fGI~~~~mTTiha~Tg~Q~llD~~~~d~rr~Raaa~NIIPt~tGaakav~kVlPeL~gKisgtavRVPv~ 325 (453)
+|++|+|||+|||++++|||||++|++|+++|++++||||+|++++||||++||++|+++||||+|+|||+|+|+||||+
T Consensus 160 ap~lkvL~d~fGI~~g~mTTvhA~T~~Q~~~D~p~kd~r~~r~aa~NIIP~~tGaakav~kVlPeL~gkltg~avRVPv~ 239 (345)
T 4dib_A 160 APVVKVLDEQFGIENGLMTTVHAYTNDQKNIDNPHKDLRRARACGQSIIPTTTGAAKALAKVLPHLNGKLHGMALRVPTP 239 (345)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEECC-------------CCTTSCTTTCCEEECCTHHHHHHHHCGGGTTTEEEEEEECCCS
T ss_pred HHHHHHHHHhcCeEEEEEEeeeeccCCceeccccccccccchhhhhceecCCCchHHHHhhhccccCCcEEEEEEEccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCcceeecccCeEeecCCCCCcceEEeCCCCceecCCeEEEEEEecCC
Q 012940 326 NVSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNE 405 (453)
Q Consensus 326 ~gs~vdltv~lek~~vt~eeI~~al~~aa~~~lkgil~~~~~~~VS~Df~~~~~S~i~D~~~t~v~~~~~vKl~~WYDNE 405 (453)
+||++||+++|+|+ +++|||+++|+++++|+|||||+|+|+|+||+||+|++||+|||+.+|++++++|+||++|||||
T Consensus 240 ~~s~~dlt~~lek~-~t~eei~~~lk~As~g~lkgil~yte~~~VS~Df~~~~~ssi~d~~~t~~~~~~~vk~~~WYDNE 318 (345)
T 4dib_A 240 NVSLVDLVVDVKRD-VTVEAINDAFKTVANGALKGIVEFSEEPLVSIDFNTNTHSAIIDGLSTMVMGDRKVKVLAWYDNE 318 (345)
T ss_dssp SEEEEEEEEEESSC-CCHHHHHHHHHHHHTTTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEEETTTEEEEEEEEETT
T ss_pred ccEEEEEEEEECCC-CCHHHHHHHHHHhhcCcccceeeeEcCcEeeeecCCCCcchhhhhhccEEECCCEEEEEEEECCC
Confidence 99999999999998 89999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhhhHHHHHHHHHhcCC
Q 012940 406 WGYSQRVVDLAHLVATKWP 424 (453)
Q Consensus 406 ~GYs~r~vdl~~~~~~~~~ 424 (453)
|||||||+||+.||+++++
T Consensus 319 ~Gys~r~~dl~~~~~~~~~ 337 (345)
T 4dib_A 319 WGYSRRVVDLVTLVVDELA 337 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHHHhhcc
Confidence 9999999999999998754
No 3
>3pym_A GAPDH 3, glyceraldehyde-3-phosphate dehydrogenase 3; NAD(P)-binding rossmann-fold domain, alpha and beta protein, oxidoreductase; HET: NAD; 2.00A {Saccharomyces cerevisiae} PDB: 2i5p_O*
Probab=100.00 E-value=7.2e-119 Score=904.76 Aligned_cols=328 Identities=49% Similarity=0.784 Sum_probs=319.6
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCC-CChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeCC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS-GGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~-~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~~ 165 (453)
+||||||||||||+++|+++++ ++++||||||+ +++++++|||||||+||+|+++++. ++++|.|||++|+|++++
T Consensus 2 ~kv~INGfGrIGr~v~R~~~~~--~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~~~v~~-~~~~l~i~Gk~I~v~~e~ 78 (332)
T 3pym_A 2 VRVAINGFGRIGRLVMRIALSR--PNVEVVALNDPFITNDYAAYMFKYDSTHGRYAGEVSH-DDKHIIVDGKKIATYQER 78 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHS--TTCEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEE-CSSEEEETTEEEEEECCS
T ss_pred eEEEEECCCcHHHHHHHHHHhC--CCcEEEEEeCCCCCHHHHHHHhcccCCCCCCCCcEEE-cCCEEEECCEEEEEEeec
Confidence 7999999999999999999987 46999999998 8999999999999999999999997 789999999999999999
Q ss_pred CCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEeccCccccCccCCeEEecCCcchhhh
Q 012940 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCL 245 (453)
Q Consensus 166 dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISaps~d~dvPtvV~gVN~~~~~~~~~~IVSnaSCTTn~L 245 (453)
+|+++||+++|+||||||||.|+++|+|++|+++||||||||+|++ |+||||||||++.|+++ ++||||||||||||
T Consensus 79 dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~--d~p~vV~gVN~~~~~~~-~~IISnasCTTn~L 155 (332)
T 3pym_A 79 DPANLPWGSSNVDIAIDSTGVFKELDTAQKHIDAGAKKVVITAPSS--TAPMFVMGVNEEKYTSD-LKIVSNASCTTNCL 155 (332)
T ss_dssp SGGGSCTTTTTCSEEEECSSSSCSHHHHHHHHHTTCSEEEESSCCS--SSCBCCTTTTGGGCCTT-CCEEECCCHHHHHH
T ss_pred ccccCCccccCccEEEEecccccCHHHHHHHHHcCCCEEEECCCCC--CCCeEeeccchhhcCcc-ccEEecCcchhhhh
Confidence 9999999999999999999999999999999999999999999997 47999999999999875 79999999999999
Q ss_pred hhHHHHHhhhcCeeEEEEEeeeccccchhhhcccc-ccchhhhhhhhccccCCCchhHHHHhhccccCCceeEEEEEeee
Q 012940 246 APFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASH-RDLRRARAAALNIVPTSTGAAKAVSLVMPQLKGKLNGIALRVPT 324 (453)
Q Consensus 246 apvlk~L~d~fGI~~~~mTTiha~Tg~Q~llD~~~-~d~rr~Raaa~NIIPt~tGaakav~kVlPeL~gKisgtavRVPv 324 (453)
+|++|+|||+|||++++|||||+||++|+++|+++ +||||+|++++||||++||++|+++||||+|+|||+|+|+||||
T Consensus 156 ap~lkvL~d~fGI~~g~mTTvha~T~~Q~~vDg~~~kd~r~~r~aa~NiIP~~tGaakav~kVlPeL~gkltg~avRVPv 235 (332)
T 3pym_A 156 APLAKVINDAFGIEEGLMTTVHSLTATQKTVDGPSHKDWRGGRTASGNIIPSSTGAAKAVGKVLPELQGKLTGMAFRVPT 235 (332)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEEECCTTSCSSSCCCTTCTGGGSCGGGCCEEEECSHHHHHHHHSGGGTTSEEEEEEEESC
T ss_pred HHHHHHHHHhcCeEEEEEEEEeeccccchhccCCCcccCccccchhhcccCCCCChHHHHHHhhhhhcCCEEEEEEEcCC
Confidence 99999999999999999999999999999999986 89999999999999999999999999999999999999999999
Q ss_pred cceeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCcceeecccCeEeecCCCCCcceEEeCCCCceecCCeEEEEEEecC
Q 012940 325 PNVSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDN 404 (453)
Q Consensus 325 ~~gs~vdltv~lek~~vt~eeI~~al~~aa~~~lkgil~~~~~~~VS~Df~~~~~S~i~D~~~t~v~~~~~vKl~~WYDN 404 (453)
++||++||+++|+|+ +++|||+++|+++++|+|||||+|+|+|+||+||+|++||+|||+.+|++++++|+||++||||
T Consensus 236 ~~~s~~dlt~~lek~-~t~eei~~~lk~a~~g~lkgil~yte~~~VS~Df~~~~~ssi~d~~~~~~~~~~~vk~~~WYDN 314 (332)
T 3pym_A 236 VDVSVVDLTVKLNKE-TTYDEIKKVVKAAAEGKLKGVLGYTEDAVVSSDFLGDSHSSIFDASAGIQLSPKFVKLVSWYDN 314 (332)
T ss_dssp SSCEEEEEEEEESSC-CCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEEEETTEEEEEEEECT
T ss_pred CCcEeeEEEEEECCc-CCHHHHHHHHHHhccCccCceeEEEcCCeEeeccCCCCcceEEccccccccCCCEEEEEEEECC
Confidence 999999999999998 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchhhhHHHHHHHHHh
Q 012940 405 EWGYSQRVVDLAHLVAT 421 (453)
Q Consensus 405 E~GYs~r~vdl~~~~~~ 421 (453)
||||||||+||+.||++
T Consensus 315 E~gys~r~~dl~~~~~~ 331 (332)
T 3pym_A 315 EYGYSTRVVDLVEHVAK 331 (332)
T ss_dssp THHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHhc
Confidence 99999999999999975
No 4
>3v1y_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosol; rossmann fold; HET: NAD; 1.86A {Oryza sativa japonica group} PDB: 3e5r_O* 3e6a_O
Probab=100.00 E-value=1.8e-118 Score=903.33 Aligned_cols=330 Identities=48% Similarity=0.807 Sum_probs=320.4
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCC-CChhhhhhhhccccceeecCc-eEEEecCC-eEEECCeEEEEE
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS-GGVKNASHLLKYDSLLGTFKA-DVKIVDNE-TISVDGKLIKVV 162 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~-~~~~~~a~LlkyDS~~G~f~~-~v~~~~~~-~l~v~Gk~I~v~ 162 (453)
++||||||||||||+++|+++++ ++++||||||+ +++++++|||||||+||+|++ +++. +++ +|.|||++|+|+
T Consensus 3 ~~kv~INGfGrIGr~v~R~~~~~--~~~~ivaiNd~~~d~~~~a~l~kyDS~hG~f~~~~v~~-~~~~~l~i~Gk~I~v~ 79 (337)
T 3v1y_O 3 KIKIGINGFGRIGRLVARVALQS--EDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKI-KDSKTLLLGEKPVTVF 79 (337)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTC--SSEEEEEEECTTSCHHHHHHHHHCCTTTCCCCSSCEEE-EETTEEEETTEEEEEE
T ss_pred ceEEEEECCChHHHHHHHHHHhC--CCcEEEEEeCCCCCHHHHHHHhhhccCCCcccCceEEE-cCCcEEEECCEEEEEE
Confidence 48999999999999999999986 46999999999 899999999999999999999 9997 456 999999999999
Q ss_pred eCCCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEeccCccccCccCCeEEecCCcch
Q 012940 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTT 242 (453)
Q Consensus 163 ~~~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISaps~d~dvPtvV~gVN~~~~~~~~~~IVSnaSCTT 242 (453)
++++|+++||+++|+||||||||.|+++|+|++|+++||||||||+|++ |+||||||||++.|++. ++|||||||||
T Consensus 80 ~e~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViIsaps~--d~p~vV~gVN~~~~~~~-~~IISnasCTT 156 (337)
T 3v1y_O 80 GIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSK--DAPMFVCGVNEDKYTSD-IDIVSNASCTT 156 (337)
T ss_dssp CCSSGGGCCHHHHTCCEEEECSSSCCSHHHHTHHHHTTCCEEEESSCCS--SSCBCCTTTTGGGCCTT-CCEEECCCHHH
T ss_pred EecCcccCCccccCCcEEEEeccccCCHHHHHHHHHcCCCEEEECCCCC--CCCeECCCCCHHHcCCC-CcEEecCchhh
Confidence 9999999999999999999999999999999999999999999999987 58999999999999876 79999999999
Q ss_pred hhhhhHHHHHhhhcCeeEEEEEeeeccccchhhhcccc-ccchhhhhhhhccccCCCchhHHHHhhccccCCceeEEEEE
Q 012940 243 NCLAPFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASH-RDLRRARAAALNIVPTSTGAAKAVSLVMPQLKGKLNGIALR 321 (453)
Q Consensus 243 n~Lapvlk~L~d~fGI~~~~mTTiha~Tg~Q~llD~~~-~d~rr~Raaa~NIIPt~tGaakav~kVlPeL~gKisgtavR 321 (453)
|||+|++|+|||+|||++++|||||++|++|+++|+++ +||||+|++++||||++||++|+++||||+|+|||+|+|+|
T Consensus 157 n~Lap~lkvL~d~fGI~~g~mTTvha~T~~q~~~Dg~~~kd~r~~r~~a~NiIP~~tGaakav~kVlPeL~gkltg~avR 236 (337)
T 3v1y_O 157 NCLAPLAKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFR 236 (337)
T ss_dssp HHHHHHHHHHHHHHCEEEEEEEEEECCCTTSBSSSCCCTTCGGGGSBGGGCCEEEECCHHHHHHHHSGGGTTSEEEEEEE
T ss_pred hhHHHHHHHHHHhcCeEEEEEeeeeeccchhhhccCCccccccccccccceeecCCCChHHHHHHhccccCCcEEEEEEE
Confidence 99999999999999999999999999999999999987 89999999999999999999999999999999999999999
Q ss_pred eeecceeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCcceeecccCeEeecCCCCCcceEEeCCCCceecCCeEEEEEE
Q 012940 322 VPTPNVSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAW 401 (453)
Q Consensus 322 VPv~~gs~vdltv~lek~~vt~eeI~~al~~aa~~~lkgil~~~~~~~VS~Df~~~~~S~i~D~~~t~v~~~~~vKl~~W 401 (453)
|||++||++||+++|+|+ +++|||+++|+++++|+|||||+|+|+|+||+||+|++||+|||+.+|++++++|+||++|
T Consensus 237 VPv~~~s~~dlt~~lek~-~t~eei~~~lk~a~~g~lkgil~yte~~~VS~Df~~~~~ssi~d~~~~~~~~~~~vk~~~W 315 (337)
T 3v1y_O 237 VPTVDVSVVDLTVRIEKA-ASYDAIKSAIKSASEGKLKGIIGYVEEDLVSTDFVGDSRSSIFDAKAGIALNDNFVKLVAW 315 (337)
T ss_dssp CSCSSCEEEEEEEEESSC-CCHHHHHHHHHHHHHTTTBTTEEEECSCCCGGGGTTCCCSEEEETTTCEEEETTEEEEEEE
T ss_pred cCCCCcEEEEEEEEECCC-CcHHHHHHHHHHhccCccCCeeEEEcCCEEeeccCCCCcceEEecccCeEECCCEEEEEEE
Confidence 999999999999999998 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCchhhhHHHHHHHHHhc
Q 012940 402 YDNEWGYSQRVVDLAHLVATK 422 (453)
Q Consensus 402 YDNE~GYs~r~vdl~~~~~~~ 422 (453)
|||||||||||+||+.||+++
T Consensus 316 YDNE~gys~r~~dl~~~~~~~ 336 (337)
T 3v1y_O 316 YDNEWGYSNRVIDLIRHMAKT 336 (337)
T ss_dssp ECTTHHHHHHHHHHHHHHHHC
T ss_pred ECCccchHHHHHHHHHHHhcc
Confidence 999999999999999999875
No 5
>3ids_C GAPDH, glyceraldehyde-3-phosphate dehydrogenase, glycoso; irreversible inhibitor, protein-ligand complex,X-RAY, glycol NAD, oxireductase; HET: NAD; 1.80A {Trypanosoma cruzi} PDB: 1ml3_A* 1qxs_C* 3dmt_A* 1k3t_A* 2x0n_A* 1gga_O* 1i32_A* 1a7k_A* 1i33_A* 1gyp_A* 1gyq_A*
Probab=100.00 E-value=2.4e-118 Score=907.66 Aligned_cols=335 Identities=46% Similarity=0.770 Sum_probs=321.3
Q ss_pred ceeeEEEEcCChhHHHHHHH----HHhCCCCCceEEEEcC-CCChhhhhhhhccccceeecCceEEEe-------cCCeE
Q 012940 85 AKLKVAINGFGRIGRNFLRC----WHGRKDSPLDVVVVND-SGGVKNASHLLKYDSLLGTFKADVKIV-------DNETI 152 (453)
Q Consensus 85 m~ikVaInGfGrIGR~vlr~----l~~r~~~~ieiVaInd-~~~~~~~a~LlkyDS~~G~f~~~v~~~-------~~~~l 152 (453)
|++||||||||||||+++|+ ++++ ++++|||||| .+++++++|||||||+||+|+++++.. ++++|
T Consensus 1 m~~kv~INGFGrIGr~v~Ra~~~~~~~~--~~~~vvaINd~~~d~~~~a~llkyDS~hG~f~~~v~~~~~~~~~~~~~~l 78 (359)
T 3ids_C 1 MPIKVGINGFGRIGRMVFQALCEDGLLG--TEIDVVAVVDMNTDAEYFAYQMRYDTVHGKFKYEVTTTKSSPSVAKDDTL 78 (359)
T ss_dssp CCEEEEEECTTHHHHHHHHHHHHTTCBT--TTEEEEEEECSSCCHHHHHHHHHEETTTEECSSCEEEECSCTTSSSCCEE
T ss_pred CceEEEEECCChHHHHHHHHhHHHHhcC--CCcEEEEEecCCCCHHHHHHHhcccCCCCCEeeEEEecccccccCCCCEE
Confidence 67899999999999999999 4544 5699999999 589999999999999999999999962 68999
Q ss_pred EECCeEEEEEe-CCCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEeccCccccCccC
Q 012940 153 SVDGKLIKVVS-NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEV 231 (453)
Q Consensus 153 ~v~Gk~I~v~~-~~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISaps~d~dvPtvV~gVN~~~~~~~~ 231 (453)
.|||++|+|++ +++|+++||+++|+||||||||.|+++|+|++|+++||||||||+|+++ |+||||||||++.|++..
T Consensus 79 ~inGk~I~v~~~e~dp~~i~w~~~gvDiVlesTG~f~s~e~A~~hl~aGAkkViISaps~~-d~p~vV~gVN~~~~~~~~ 157 (359)
T 3ids_C 79 VVNGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTAKAAAEGHLRGGARKVVISAPASG-GAKTLVMGVNHHEYNPSE 157 (359)
T ss_dssp EETTEEEEECCCCSSTTTSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCCEEEESSCCBS-SCEECCTTTTGGGCCTTT
T ss_pred EECCEEEEEEEccCCcccCCccccCccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCCC-CCCeEEeccCHHHcCCCC
Confidence 99999999998 8999999999999999999999999999999999999999999999975 689999999999998723
Q ss_pred CeEEecCCcchhhhhhHHHHH-hhhcCeeEEEEEeeeccccchhhhcccc-ccchhhhhhhhccccCCCchhHHHHhhcc
Q 012940 232 ANIVSNASCTTNCLAPFVKVM-DEELGIVKGAMTTTHSYTGDQRLLDASH-RDLRRARAAALNIVPTSTGAAKAVSLVMP 309 (453)
Q Consensus 232 ~~IVSnaSCTTn~Lapvlk~L-~d~fGI~~~~mTTiha~Tg~Q~llD~~~-~d~rr~Raaa~NIIPt~tGaakav~kVlP 309 (453)
++||||||||||||+|++|+| ||+|||++++|||||+||++|+++|++| +||||+|++++||||++||++|+++||||
T Consensus 158 ~~IISNaSCTTn~Lap~lkvL~~d~fGI~~g~mTTvha~T~tQ~~vD~~~~kd~r~~r~aa~NiIP~~tGaakav~kVlP 237 (359)
T 3ids_C 158 HHVVSNASCTTNCLAPIVHVLVKEGFGVQTGLMTTIHSYTATQKTVDGVSVKDWRGGRAAAVNIIPSTTGAAKAVGMVIP 237 (359)
T ss_dssp CSEEECCCHHHHHHHHHHHHHHHTTCCCSEEEEEEEEECCTTSBSSSCCCTTCTGGGSBGGGCCEEEECSHHHHHHHHSG
T ss_pred CCEEECCchHhhhHHHhhhhhhhccCCeEEEEEeeeeeccchhhhhcCCccccccccccCcceeEccCCchHHHHhhhch
Confidence 799999999999999999999 9999999999999999999999999998 79999999999999999999999999999
Q ss_pred ccCCceeEEEEEeeecceeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCcceeecccCeEeecCCCCCcceEEeCCCCc
Q 012940 310 QLKGKLNGIALRVPTPNVSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTM 389 (453)
Q Consensus 310 eL~gKisgtavRVPv~~gs~vdltv~lek~~vt~eeI~~al~~aa~~~lkgil~~~~~~~VS~Df~~~~~S~i~D~~~t~ 389 (453)
+|+|||+|+|+||||++||++||+++|+|+ +++|||+++|+++++|+|||||+|+|+|+||+||+|++||+|||+.+|+
T Consensus 238 eL~gkltg~avRVPv~~vs~~dlt~~lek~-~t~eei~~~lk~A~~g~lkgil~yte~~~VS~Df~~~~~ssi~d~~~t~ 316 (359)
T 3ids_C 238 STQGKLTGMSFRVPTPDVSVVDLTFTAARD-TSIQEIDAALKRASKTYMKGILGYTDEELVSADFINDNRSSIYDSKATL 316 (359)
T ss_dssp GGTTSEEEEEEEESCSSCEEEEEEEECSSC-CCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCSSEEEEHHHHH
T ss_pred hhcCceEEEEEEcCCCCcEEEEEEEEECCC-CCHHHHHHHHHHhccCccCCceeEecCCEEeeecCCCCcceeEecccce
Confidence 999999999999999999999999999998 8999999999999999999999999999999999999999999999999
Q ss_pred eec----CCeEEEEEEecCCCchhhhHHHHHHHHHhcC
Q 012940 390 VMG----DDMVKVVAWYDNEWGYSQRVVDLAHLVATKW 423 (453)
Q Consensus 390 v~~----~~~vKl~~WYDNE~GYs~r~vdl~~~~~~~~ 423 (453)
+++ ++|+||++||||||||||||+||+.||+++.
T Consensus 317 ~~~~~~~~~~vk~~~WYDNE~Gys~r~vdl~~~~~~~~ 354 (359)
T 3ids_C 317 QNNLPKERRFFKIVSWYDNEWGYSHRVVDLVRHMASKD 354 (359)
T ss_dssp HSSCTTCSSEEEEEEEECTTHHHHHHHHHHHHHHHHHH
T ss_pred eecccCCCCEEEEeEEECCCcchHHHHHHHHHHHHhhh
Confidence 998 8999999999999999999999999998863
No 6
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=100.00 E-value=7.9e-117 Score=894.14 Aligned_cols=331 Identities=47% Similarity=0.776 Sum_probs=320.5
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCC-CChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS-GGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~-~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~ 164 (453)
++||||||||||||.++|++.++ + ++||||||+ .++++++|||||||+||+|+++++. ++++|.|||++|+|+++
T Consensus 7 ~~kvgInGFGRIGrlv~R~~~~~--~-veivainDp~~d~~~~a~l~~yDS~hG~f~~~v~~-~~~~l~i~Gk~I~v~~e 82 (346)
T 3h9e_O 7 ELTVGINGFGRIGRLVLRACMEK--G-VKVVAVNDPFIDPEYMVYMFKYDSTHGRYKGSVEF-RNGQLVVDNHEISVYQC 82 (346)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--T-CEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEE-ETTEEEETTEEEEEECC
T ss_pred eeEEEEECCChHHHHHHHHHHhC--C-CEEEEEeCCCCChhHhcccccccCCCCCCCCcEEE-cCCEEEECCEEEEEEec
Confidence 47999999999999999999986 3 999999997 7999999999999999999999997 78999999999999999
Q ss_pred CCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEeccCccccCccCCeEEecCCcchhh
Q 012940 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNC 244 (453)
Q Consensus 165 ~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISaps~d~dvPtvV~gVN~~~~~~~~~~IVSnaSCTTn~ 244 (453)
++|++|||+++|+||||||||.|+++|+|++|+++||||||||+|++ |+||||||||++.|++..++|||||||||||
T Consensus 83 ~dp~~i~W~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkVVIsaps~--d~plvV~gVN~~~~~~~~~~IISNasCTTn~ 160 (346)
T 3h9e_O 83 KEPKQIPWRAVGSPYVVESTGVYLSIQAASDHISAGAQRVVISAPSP--DAPMFVMGVNENDYNPGSMNIVSNASCTTNC 160 (346)
T ss_dssp SSGGGCCGGGGTSCEEEECSSSCCSHHHHHHHHHTTCSEEEESSCCS--SSCBCCTTTTGGGCCTTTCSEEECCCHHHHH
T ss_pred CChhhCCcccccccEEEEeccccCCHHHHHHHHHcCCCEEEECCCCC--CCCeeCcccCHHHcCcccCCEEECCcchhhh
Confidence 99999999999999999999999999999999999999999999987 5899999999999987237999999999999
Q ss_pred hhhHHHHHhhhcCeeEEEEEeeeccccchhhhcccc-ccchhhhhhhhccccCCCchhHHHHhhccccCCceeEEEEEee
Q 012940 245 LAPFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASH-RDLRRARAAALNIVPTSTGAAKAVSLVMPQLKGKLNGIALRVP 323 (453)
Q Consensus 245 Lapvlk~L~d~fGI~~~~mTTiha~Tg~Q~llD~~~-~d~rr~Raaa~NIIPt~tGaakav~kVlPeL~gKisgtavRVP 323 (453)
|+|++|+|||+|||++++|||||+||++|+++|+++ +||||+|++++||||++||++|+++||||+|+|||+|+|+|||
T Consensus 161 Lap~lkvL~d~fGI~~g~mTTvhA~T~tQ~~~Dg~~~kd~r~~r~aa~NiIP~~tGaakavgkViPeL~gkltg~avRVP 240 (346)
T 3h9e_O 161 LAPLAKVIHERFGIVEGLMTTVHSYTATQKTVDGPSRKAWRDGRGAHQNIIPASTGAAKAVTKVIPELKGKLTGMAFRVP 240 (346)
T ss_dssp HHHHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCTTSGGGGSBTTTCCEEECCHHHHHHHHHSGGGTTTEEEEEEEES
T ss_pred HHHHHHHHHHHhCeeEEEEeeeeeccCccccccCCCCCCccccccceeeeecccCchHHhhheechhhcCcEEEEEEEcc
Confidence 999999999999999999999999999999999986 8999999999999999999999999999999999999999999
Q ss_pred ecceeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCcceeecccCeEeecCCCCCcceEEeCCCCceecCCeEEEEEEec
Q 012940 324 TPNVSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYD 403 (453)
Q Consensus 324 v~~gs~vdltv~lek~~vt~eeI~~al~~aa~~~lkgil~~~~~~~VS~Df~~~~~S~i~D~~~t~v~~~~~vKl~~WYD 403 (453)
|++||++||+++++|+ +++|||+++|+++++|+|||||+|+|+|+||+||+|++||+|||+.+|++++++|+||++|||
T Consensus 241 v~~~s~~dlt~~lek~-~t~eei~~~lk~A~~g~lkgil~yte~~~VS~Df~~~~~ssi~d~~~~~~~~~~~vk~~~WYD 319 (346)
T 3h9e_O 241 TPDVSVVDLTCRLAQP-APYSAIKEAVKAAAKGPMAGILAYTEDEVVSTDFLGDTHSSIFDAKAGIALNDNFVKLISWYD 319 (346)
T ss_dssp CSSCEEEEEEEEESSC-CCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEETTTCEEEETTEEEEEEEEC
T ss_pred cccceeEEEEEEECCc-CCHHHHHHHHHHhccCccCCceeEEcCCeEeeccCCCCCceeEcccccEEecCCEEEEEEEEC
Confidence 9999999999999998 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCchhhhHHHHHHHHHhcC
Q 012940 404 NEWGYSQRVVDLAHLVATKW 423 (453)
Q Consensus 404 NE~GYs~r~vdl~~~~~~~~ 423 (453)
|||||||||+||+.||+++.
T Consensus 320 NE~gys~r~~dl~~~~~~~~ 339 (346)
T 3h9e_O 320 NEYGYSHRVVDLLRYMFSRD 339 (346)
T ss_dssp TTHHHHHHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHhhh
Confidence 99999999999999999863
No 7
>3lvf_P GAPDH 1, glyceraldehyde-3-phosphate dehydrogenase 1; oxidoreductase, glycolysis, rossmann fold; HET: NAD; 1.70A {Staphylococcus aureus} PDB: 3vaz_P* 3l6o_Q 3k73_Q 3lc2_O* 3lc7_O 3lc1_P* 3hq4_R* 3kv3_O* 3l4s_Q* 3k9q_Q* 3ksd_Q* 3ksz_O*
Probab=100.00 E-value=4.2e-117 Score=893.10 Aligned_cols=330 Identities=46% Similarity=0.702 Sum_probs=319.4
Q ss_pred cceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEe
Q 012940 84 VAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (453)
Q Consensus 84 ~m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~ 163 (453)
.|++||||||||||||+++|+++++ ++++||||||++++++++|||||||+||+|+++++. ++++|.|||++|+|++
T Consensus 2 ~m~~kv~INGfGrIGr~v~R~~~~~--~~~~ivaind~~d~~~~a~l~kyDS~hG~f~~~v~~-~~~~l~inGk~I~v~~ 78 (338)
T 3lvf_P 2 SMAVKVAINGFGRIGRLAFRRIQEV--EGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEV-VDGGFRVNGKEVKSFS 78 (338)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHTS--TTEEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEE-ETTEEEETTEEEEEEC
T ss_pred CccEEEEEECCCcHHHHHHHHHHHC--CCceEEEEecCCCHHHHHHHhccCCCCCCcCCeEEE-cCCEEEECCEEEEEEE
Confidence 5789999999999999999999986 469999999999999999999999999999999997 7899999999999999
Q ss_pred CCCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEeccCccccCccCCeEEecCCcchh
Q 012940 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTN 243 (453)
Q Consensus 164 ~~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISaps~d~dvPtvV~gVN~~~~~~~~~~IVSnaSCTTn 243 (453)
+++|+++||+++|+||||||||.|+++|+|++|+++||||||||+|+++ |+||||||||++.|++. ++||||||||||
T Consensus 79 e~dp~~i~w~~~gvDiVlesTG~f~s~e~a~~hl~aGAkkViISaps~~-d~p~vV~gVN~~~~~~~-~~IISNasCTTn 156 (338)
T 3lvf_P 79 EPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATG-DLKTIVFNTNHQELDGS-ETVVSGASCTTN 156 (338)
T ss_dssp CSCGGGSCTTTTTCSEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBS-SCEECCTTTTGGGCCSC-CSEEECCCHHHH
T ss_pred ecccccCCccccCCCEEEEccCCcCCHHHHHHHHHcCCCEEEECCCCCC-CCCEEeccCCHHHcCcc-CCeEecCchhhh
Confidence 9999999999999999999999999999999999999999999999975 68999999999999865 799999999999
Q ss_pred hhhhHHHHHhhhcCeeEEEEEeeeccccchhhhccccc--cchhhhhhhhccccCCCchhHHHHhhccccCCceeEEEEE
Q 012940 244 CLAPFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASHR--DLRRARAAALNIVPTSTGAAKAVSLVMPQLKGKLNGIALR 321 (453)
Q Consensus 244 ~Lapvlk~L~d~fGI~~~~mTTiha~Tg~Q~llD~~~~--d~rr~Raaa~NIIPt~tGaakav~kVlPeL~gKisgtavR 321 (453)
||+|++|+|||+|||++++|||||+||++|+++|++++ ||||+|++++||||++||++|+++||||+|+|||+|||+|
T Consensus 157 ~Lap~lkvL~d~fGI~~g~mTTvha~T~~q~~~D~~~~k~d~r~~r~aa~NiIP~~tGaakav~kVlPeL~gkltg~avR 236 (338)
T 3lvf_P 157 SLAPVAKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQR 236 (338)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEEECCTTSCSSSCCCTTCCTTTTSCGGGCCEEEECSTTTTGGGTCGGGTTSEEEEEEE
T ss_pred hhHHHHHHHHHhcCEEEEEEeeeccccchhhhhcCCccccccccchhhhceEEeCCCchHHHHhhhchhhcCcEEEEEEE
Confidence 99999999999999999999999999999999999986 9999999999999999999999999999999999999999
Q ss_pred eeecceeEEEEEEEEcc-CCCCHHHHHHHHHHcccCCCCcceeecccCeEeecCCCCCcceEEeCCCCceec---CCeEE
Q 012940 322 VPTPNVSVVDLVVNVEK-KGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMG---DDMVK 397 (453)
Q Consensus 322 VPv~~gs~vdltv~lek-~~vt~eeI~~al~~aa~~~lkgil~~~~~~~VS~Df~~~~~S~i~D~~~t~v~~---~~~vK 397 (453)
|||++||++||+++|+| + +++|||+++|+++++|+ |+|+|+|+||+||+|++||+|||+.+|++++ ++|+|
T Consensus 237 VPv~~~s~~dlt~~lek~~-~t~eei~~~lk~As~g~----l~yte~~~VS~Df~~~~~ssi~d~~~t~~~~~~~~~~vk 311 (338)
T 3lvf_P 237 VPVATGSLTELTVVLEKQD-VTVEQVNEAMKNASNES----FGYTEDEIVSSDVVGMTYGSLFDATQTRVMSVGDRQLVK 311 (338)
T ss_dssp ESCSSCEEEEEEEEESSSS-CCHHHHHHHHHHTCCSS----EEEECSCCCGGGGTTCCCSEEEEGGGCEEEEETTEEEEE
T ss_pred cCCCceEEEEEEEEEccCC-CCHHHHHHHHHHhhcCC----cccccCCEEeEeeCCCCcceEEecccceEecCCCCCEEE
Confidence 99999999999999999 8 89999999999999987 9999999999999999999999999999998 89999
Q ss_pred EEEEecCCCchhhhHHHHHHHHHhcC
Q 012940 398 VVAWYDNEWGYSQRVVDLAHLVATKW 423 (453)
Q Consensus 398 l~~WYDNE~GYs~r~vdl~~~~~~~~ 423 (453)
|++||||||||||||+||+.||+++.
T Consensus 312 ~~~WYDNE~gys~r~~dl~~~~~~~~ 337 (338)
T 3lvf_P 312 VAAWYDNEMSYTAQLVRTLAYLAELS 337 (338)
T ss_dssp EEEEECTTHHHHHHHHHHHHHHHHHT
T ss_pred EEEEECCccchHHHHHHHHHHHHhhc
Confidence 99999999999999999999998753
No 8
>3hja_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; niaid, ssgcid, decode, UW, SBRI, LYME disease, non-hodgkin lymphomas, cytoplasm; HET: NAD; 2.20A {Borrelia burgdorferi B31}
Probab=100.00 E-value=4.1e-117 Score=897.77 Aligned_cols=331 Identities=55% Similarity=0.890 Sum_probs=319.8
Q ss_pred cceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEe
Q 012940 84 VAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (453)
Q Consensus 84 ~m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~ 163 (453)
.|++||||||||||||.++|+|+++ +++||||||+.++++++|||||||+||+|+++++. ++++|.|||++|+|++
T Consensus 19 ~~~~kVaInGfGrIGr~vlr~l~e~---~~~ivaIndl~d~~~~a~llkydS~hG~f~~~v~~-~~~~l~i~Gk~I~v~~ 94 (356)
T 3hja_A 19 PGSMKLAINGFGRIGRNVFKIAFER---GIDIVAINDLTDPKTLAHLLKYDSTFGVYNKKVES-RDGAIVVDGREIKIIA 94 (356)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHT---TCEEEEEECSSCHHHHHHHHHEETTTEECSSCEEE-ETTEEEETTEEEEEEC
T ss_pred CCCeEEEEECCCHHHHHHHHHHHHC---CCCEEEEeCCCCHHHhhhhhccccCCCCCCCCEEE-cCCEEEECCEEEEEEE
Confidence 3468999999999999999999998 38999999999999999999999999999999997 7899999999999999
Q ss_pred CCCCCCCCccccCccEEEcCCCCCCC----hhhHHHHHH-cCCCEEEEeCCCCCCCCCeEEeccCccccCccCCeEEecC
Q 012940 164 NRDPLQLPWAELGIDIVIEGTGVFVD----GPGAGKHIQ-AGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNA 238 (453)
Q Consensus 164 ~~dp~~l~W~~~gvDiVie~TG~f~s----~e~a~~hl~-aGAkkVIISaps~d~dvPtvV~gVN~~~~~~~~~~IVSna 238 (453)
+++|+++||++.|+||||||||.|++ +++|++|++ +||||||||+|++| ++||||||||++.|++. ++|||||
T Consensus 95 ~~dp~~i~w~~~gvDiV~esTG~f~s~~~~~e~a~~hl~~aGAkkVVIsaps~d-~vp~vV~gVN~~~~~~~-~~IISNa 172 (356)
T 3hja_A 95 ERDPKNLPWAKLGIDVVIESTGVFSSATSDKGGYLDHVNHAGAKKVILTVPAKD-EIKTIVLGVNDHDINSD-LKAVSNA 172 (356)
T ss_dssp CSSGGGCCHHHHTCSEEEECSSSCCSSCCTTCCGGGGTTTSCCSEEEESSCCSS-CCEECCTTTSGGGCCTT-CCEEECC
T ss_pred cCChhhCCccccCCCEEEEecccccccchhHHHHHHHHHhCCCeEEEECCCCCC-CCCEEeccCCHHHcCcC-ccEEECC
Confidence 99999999999999999999999999 999999999 99999999999987 78999999999999876 6899999
Q ss_pred CcchhhhhhHHHHHhhhcCeeEEEEEeeeccccchhhhccccccchhhhhhhhccccCCCchhHHHHhhccccCCceeEE
Q 012940 239 SCTTNCLAPFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVMPQLKGKLNGI 318 (453)
Q Consensus 239 SCTTn~Lapvlk~L~d~fGI~~~~mTTiha~Tg~Q~llD~~~~d~rr~Raaa~NIIPt~tGaakav~kVlPeL~gKisgt 318 (453)
|||||||+|++|+|||+|||++++|||||++|++|+++|++++||||+|++++||||++||++|+++||||+|+|||+|+
T Consensus 173 SCTTn~Lap~lkvL~d~fGI~~g~mTTvhA~T~~Q~~~D~p~kd~r~~r~aa~NIIP~~tGaakav~kVlPeL~gkltg~ 252 (356)
T 3hja_A 173 SCTTNCLAPLAKVLHESFGIEQGLMTTVHAYTNDQRILDLPHSDLRRARAAALSIIPTSTGAAKAVGLVLPELKGKLNGT 252 (356)
T ss_dssp CHHHHHHHHHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCSSTTTTSBTTTSCEEEECCTTTTHHHHCGGGTTTEEEE
T ss_pred ccchhhhhHhHHHHHHhcCeEEEEEEEEEecccccccccCcccccccccccccEEEcCCCchHHHHHHhccccCCcEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeeecceeEEEEEEEE-ccCCCCHHHHHHHHHHcccCC-CCcceeecccCeEeecCCCCCcceEEeCCCCceecCCeE
Q 012940 319 ALRVPTPNVSVVDLVVNV-EKKGITAEDVNAAFRKAAEGP-LKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMV 396 (453)
Q Consensus 319 avRVPv~~gs~vdltv~l-ek~~vt~eeI~~al~~aa~~~-lkgil~~~~~~~VS~Df~~~~~S~i~D~~~t~v~~~~~v 396 (453)
|+||||++||++||+++| +|+ +++|||+++|+++++|+ |||||+|+|+|+||+||+|++||+|||+.+|++++++|+
T Consensus 253 avRVPv~~~s~~dlt~~l~ek~-~t~eeI~~~lk~Aa~g~~lkgil~yte~~~VS~Df~~~~~ssi~d~~~t~~~~~~~v 331 (356)
T 3hja_A 253 SMRVPVPTGSIVDLTVQLKKKD-VTKEEINSVLRKASETPELKGILGYTEDPIVSSDIKGNSHSSIVDGLETMVLENGFA 331 (356)
T ss_dssp EEEESCSSCEEEEEEEEESCTT-CCHHHHHHHHHHHHHSTTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEECSTTEE
T ss_pred EEEcCCCccEeEEEEEEEccCC-CCHHHHHHHHHHHhcCchhccccceecCCeEeeeccCCCCceEEcCcCCEEEcCCEE
Confidence 999999999999999999 998 89999999999999999 999999999999999999999999999999999999999
Q ss_pred EEEEEecCCCchhhhHHHHHHHHHh
Q 012940 397 KVVAWYDNEWGYSQRVVDLAHLVAT 421 (453)
Q Consensus 397 Kl~~WYDNE~GYs~r~vdl~~~~~~ 421 (453)
||++||||||||||||+||+.||++
T Consensus 332 k~~~WYDNE~Gys~r~vdl~~~~~~ 356 (356)
T 3hja_A 332 KILSWYDNEFGYSTRVVDLAQKLVK 356 (356)
T ss_dssp EEEEEECTTHHHHHHHHHHHHHHC-
T ss_pred EEEEEECCccchHHHHHHHHHHHhC
Confidence 9999999999999999999999863
No 9
>1obf_O Glyceraldehyde 3-phosphate dehydrogenase; glycolytic pathway, oxidoreductase, free-NAD GAPDH; HET: PG4; 1.7A {Achromobacter xylosoxidans} SCOP: c.2.1.3 d.81.1.1 PDB: 3gnq_A*
Probab=100.00 E-value=9.5e-115 Score=878.10 Aligned_cols=331 Identities=49% Similarity=0.815 Sum_probs=319.9
Q ss_pred eeEEEEcCChhHHHHHHHHHhCC-CCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeCC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRK-DSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~-~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~~ 165 (453)
+||||||||||||+++|+|+++. .++||||+|||++++++++|||+|||+||+|+++++. +++.|.++|++|.+++++
T Consensus 2 ikVaInGfGrIGr~v~r~l~~~~~~~~~evvaInd~~~~~~~a~ll~ydS~hg~f~~~v~~-~~~~l~v~g~~i~v~~~~ 80 (335)
T 1obf_O 2 IRVAINGYGRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLTRYDTAHGKFPGTVSV-NGSYMVVNGDKIRVDANR 80 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSCSSEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEE-ETTEEEETTEEEEEECCS
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCCcEEEEEeCCCCHHHHHHHhccCCcCCCCCCCEEE-eCCEEEECCEEEEEEEcC
Confidence 79999999999999999999871 2469999999999999999999999999999999997 689999999999999999
Q ss_pred CCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCC-eEEeccCccccCccCCeEEecCCcchhh
Q 012940 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIP-TYVVGVNEKDYDHEVANIVSNASCTTNC 244 (453)
Q Consensus 166 dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISaps~d~dvP-tvV~gVN~~~~~~~~~~IVSnaSCTTn~ 244 (453)
+|+++||++.|+||||||||.|+++++|++|+++||||||||+|+++ |+| |||||||++.|++. ++|||||||||||
T Consensus 81 dp~~~~w~~~gvDiV~estG~f~s~e~a~~h~~aGakkVviSaps~~-dvp~~vV~gVN~~~~~~~-~~IISNasCTTn~ 158 (335)
T 1obf_O 81 NPAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPGGA-DVDATVVYGVNHGTLKST-DTVISNASCTTNC 158 (335)
T ss_dssp CGGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCCCT-TSSEECCTTTSGGGCCTT-CCEEECCCHHHHH
T ss_pred CcccCCccccCCCEEEEccCccccHHHHHHHHHcCCCEEEECCcccC-CCCceEEccCCHHHhCcC-ccEEeCCcHHHHH
Confidence 99999999999999999999999999999999999999999999863 689 99999999999875 7899999999999
Q ss_pred hhhHHHHHhhhcCeeEEEEEeeeccccchhhhccccccchhhhhhhhccccCCCchhHHHHhhccccCCceeEEEEEeee
Q 012940 245 LAPFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVMPQLKGKLNGIALRVPT 324 (453)
Q Consensus 245 Lapvlk~L~d~fGI~~~~mTTiha~Tg~Q~llD~~~~d~rr~Raaa~NIIPt~tGaakav~kVlPeL~gKisgtavRVPv 324 (453)
|+|++|+|||+|||++++|||||+|||+|+++|++|+||||+|++++||||++||++|+++||||+|+|||+|||+||||
T Consensus 159 Lap~lk~L~d~fGI~~~~mTTvha~T~~q~~~d~~~~d~r~~r~~a~NiIP~~tGaakav~kVlP~L~gkltg~avRVPv 238 (335)
T 1obf_O 159 LAPLVKPLNDKLGLQDGLMTTVHAYTNNQVLTDVYHEDLRRARSATMSMIPTKTGAAAAVGDVLPELDGKLNGYAIRVPT 238 (335)
T ss_dssp HHHHHHHHHHHTCEEEEEEEEEEECCTTSCSSCCCCSSTTTTSCTTTCCEEEECCHHHHHHHHCGGGTTSEEEEEEEESC
T ss_pred HHHHHHHHHHhcCeeEEEEEEEchhhhhhhhhcccccccccccchhhccccCCCcchHhHhhhccccCCceEEEEEEeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCcceeecccCeEeecCCCCCcceEEeCCCCceecCCeEEEEEEecC
Q 012940 325 PNVSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDN 404 (453)
Q Consensus 325 ~~gs~vdltv~lek~~vt~eeI~~al~~aa~~~lkgil~~~~~~~VS~Df~~~~~S~i~D~~~t~v~~~~~vKl~~WYDN 404 (453)
++||++||+++|+|+ +++|||+++|+++++|+|||||+|+|+|+||+||+|++||+|||+.+|++ +++|+||++||||
T Consensus 239 ~~~s~~dl~v~lek~-~t~eei~~~lk~a~~~~lkgil~y~~~~~vS~d~~~~~~ssi~d~~~~~~-~~~~vk~~~WyDN 316 (335)
T 1obf_O 239 INVSIVDLSFVAKRN-TTVEEVNGILKAASEGELKGILDYNTEPLVSVDYNHDPASSTVDASLTKV-SGRLVKVSSWYDN 316 (335)
T ss_dssp SSCEEEEEEEEESSC-CCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEE-ETTEEEEEEEECT
T ss_pred cceEEEEEEEEECCC-CCHHHHHHHHHHhhhcccCCeecccCCceEeeeeCCCCccceeccccccc-cCCEEEEEEEeCC
Confidence 999999999999998 89999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred CCchhhhHHHHHHHHHhc
Q 012940 405 EWGYSQRVVDLAHLVATK 422 (453)
Q Consensus 405 E~GYs~r~vdl~~~~~~~ 422 (453)
||||||||+||+.||+++
T Consensus 317 E~gys~r~~dl~~~~~~~ 334 (335)
T 1obf_O 317 EWGFSNRMLDTTVALMSA 334 (335)
T ss_dssp THHHHHHHHHHHHHHHHC
T ss_pred CcchHhHHHHHHHHHhcc
Confidence 999999999999999764
No 10
>2b4r_O Glyceraldehyde-3-phosphate dehydrogenase; SGPP, structural genomics, PSI, structural genomi pathogenic protozoa consortium; HET: NAD AES; 2.25A {Plasmodium falciparum} SCOP: c.2.1.3 d.81.1.1 PDB: 2b4t_O* 1ywg_O*
Probab=100.00 E-value=2.5e-114 Score=877.14 Aligned_cols=330 Identities=48% Similarity=0.792 Sum_probs=319.9
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC-CCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND-SGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd-~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~ 164 (453)
++||||||||||||+++|+++++ ++||||+||| ..++++++|||+|||+||+|+++++. +++.|.++|++|.|+++
T Consensus 11 ~~kv~INGfGrIGr~v~ra~~~~--~~~evvaInd~~~~~~~~a~l~~yDS~hg~~~~~v~~-~~~~l~v~Gk~i~v~~~ 87 (345)
T 2b4r_O 11 ATKLGINGFGRIGRLVFRAAFGR--KDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTH-ADGFLLIGEKKVSVFAE 87 (345)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTC--SSEEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEE-ETTEEEESSCEEEEECC
T ss_pred heEEEEeCCchHHHHHHHHHhhC--CCcEEEEEcCCCCChHHHHHHhccCCCCCcCCCCEEE-cCCEEEECCEEEEEEEc
Confidence 68999999999999999999987 5799999999 68999999999999999999999996 68999999999999999
Q ss_pred CCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEeccCccccCccCCeEEecCCcchhh
Q 012940 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNC 244 (453)
Q Consensus 165 ~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISaps~d~dvPtvV~gVN~~~~~~~~~~IVSnaSCTTn~ 244 (453)
++|++++|+++|+||||||||.|+++++|++|+++||||||||+|+++ |+||||||||++.|++. ++|||||||||||
T Consensus 88 ~dp~~~~w~~~gvDiV~estG~f~s~e~a~~hl~aGakkVVIsaps~~-dvplvV~gVN~~~~~~~-~~IISNasCTTn~ 165 (345)
T 2b4r_O 88 KDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKD-DTPIYVMGINHHQYDTK-QLIVSNASCTTNC 165 (345)
T ss_dssp SSGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSS-SCCBCCTTTTGGGCCTT-CCEEECCCHHHHH
T ss_pred CCcccCcccccCCCEEEECcCccccHhhHHHHHHCCCCEEEECCCCCC-CCCEEEecCCHHHhCCC-CCEEECCchHHHH
Confidence 999999999999999999999999999999999999999999999974 58999999999999875 7899999999999
Q ss_pred hhhHHHHHhhhcCeeEEEEEeeeccccchhhhcccc---ccchhhhhhhhccccCCCchhHHHHhhccccCCceeEEEEE
Q 012940 245 LAPFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASH---RDLRRARAAALNIVPTSTGAAKAVSLVMPQLKGKLNGIALR 321 (453)
Q Consensus 245 Lapvlk~L~d~fGI~~~~mTTiha~Tg~Q~llD~~~---~d~rr~Raaa~NIIPt~tGaakav~kVlPeL~gKisgtavR 321 (453)
|+|++|+|||+|||++++|||||+|||+|+++|+++ +|+||+|++++||||++||++|+++||||+|+|||+|+|+|
T Consensus 166 Lap~lk~L~d~fGI~~~~mTTvhA~T~~q~~~d~~~~~~~d~r~~r~~a~NiIP~~tGaakav~kVlP~L~gkltg~avR 245 (345)
T 2b4r_O 166 LAPLAKVINDRFGIVEGLMTTVHASTANQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFR 245 (345)
T ss_dssp HHHHHHHHHHHHCEEEEEEEEEECCCTTSCSSSCCCGGGCCGGGGSCTTTCCEEEECCHHHHHHHHSGGGTTTEEEEEEE
T ss_pred HHHHHHHHHHhcCeeEEEEEEeehhhchhhhhcccccccCCCccccchhhccCcCCCchHHHHHHhhhhcCCcEEEEEEE
Confidence 999999999999999999999999999999999998 89999999999999999999999999999999999999999
Q ss_pred eeecceeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCcceeecccCeEeecCCCCCcceEEeCCCCceecCCeEEEEEE
Q 012940 322 VPTPNVSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAW 401 (453)
Q Consensus 322 VPv~~gs~vdltv~lek~~vt~eeI~~al~~aa~~~lkgil~~~~~~~VS~Df~~~~~S~i~D~~~t~v~~~~~vKl~~W 401 (453)
|||++||++||+++|+|+ +++|||+++|+++++|+|||||+|+|+|+||+||+|++||+|||+.+|++++++|+||++|
T Consensus 246 VPv~~gs~~dltv~lek~-~t~eei~~~lk~a~~~~lkgil~y~~~~~VS~d~~~~~~ssi~d~~~~~~~~~~~vk~~~W 324 (345)
T 2b4r_O 246 VPIGTVSVVDLVCRLQKP-AKYEEVALEIKKAAEGPLKGILGYTEDEVVSQDFVHDNRSSIFDMKAGLALNDNFFKLVSW 324 (345)
T ss_dssp CSCSSCEEEEEEEEESSC-CCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEEEEEEEEEETTEEEEEEE
T ss_pred ecccceEEEEEEEEECCC-CCHHHHHHHHHHhhhcccCCcccccCCCceEEeeCCCCcccccccccCeEecCCEEEEEEE
Confidence 999999999999999998 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCchhhhHHHHHHHHHh
Q 012940 402 YDNEWGYSQRVVDLAHLVAT 421 (453)
Q Consensus 402 YDNE~GYs~r~vdl~~~~~~ 421 (453)
|||||||||||+||+.||++
T Consensus 325 yDNE~gys~r~~dl~~~~~~ 344 (345)
T 2b4r_O 325 YDNEWGYSNRVLDLAVHITT 344 (345)
T ss_dssp ECTTHHHHHHHHHHHHHHHC
T ss_pred eCCCcchHhHHHHHHHHHhc
Confidence 99999999999999999965
No 11
>2ep7_A GAPDH, glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase, structural genomics, NPPSFA; HET: NAD; 2.30A {Aquifex aeolicus}
Probab=100.00 E-value=1.3e-114 Score=878.79 Aligned_cols=332 Identities=56% Similarity=0.902 Sum_probs=319.6
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeC
Q 012940 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (453)
Q Consensus 85 m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~ 164 (453)
|++||||||||||||.++|+|+++ ++|+||+|||+.++++++|||+|||+||+|+++++. +++.|.++|++|.++++
T Consensus 1 m~ikV~InGfGrIGr~v~r~l~~~--~~~evvaInd~~~~~~~a~ll~yDs~hG~~~~~v~~-~~~~l~v~Gk~i~v~~~ 77 (342)
T 2ep7_A 1 MAIKVGINGFGRIGRSFFRASWGR--EEIEIVAINDLTDAKHLAHLLKYDSVHGIFKGSVEA-KDDSIVVDGKEIKVFAQ 77 (342)
T ss_dssp --CEEEEECCSHHHHHHHHHHTTC--TTCEEEEEECSSCHHHHHHHHHEETTTEECSSCEEE-CSSEEEETTEEEEEECC
T ss_pred CceEEEEECCCHHHHHHHHHHHhC--CCceEEEEecCCChHHHhhhhhcccccccCCCcEEE-cCCEEEECCEEEEEEEc
Confidence 568999999999999999999887 569999999998999999999999999999999997 68999999999999999
Q ss_pred CCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCC-eEEeccCccccCccCCeEEecCCcchh
Q 012940 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIP-TYVVGVNEKDYDHEVANIVSNASCTTN 243 (453)
Q Consensus 165 ~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISaps~d~dvP-tvV~gVN~~~~~~~~~~IVSnaSCTTn 243 (453)
++|++++|+++|+||||||||.|+++++++.|+++||||||||+|++ |+| |||||||++.|++..++||||||||||
T Consensus 78 ~dp~~~~w~~~gvDiV~estG~~~s~e~a~~hl~aGakkVvisaps~--dvp~~vV~gVN~~~~~~~~~~IISNasCTTn 155 (342)
T 2ep7_A 78 KDPSQIPWGDLGVDVVIEATGVFRDRENASKHLQGGAKKVIITAPAK--NPDITVVLGVNEEKYNPKEHNIISNASCTTN 155 (342)
T ss_dssp SSGGGCCHHHHTCSEEEECSSSCCBHHHHTTTGGGTCSEEEESSCCB--SCSEECCTTTSGGGCCTTTCCEEECCCHHHH
T ss_pred CChhhCCccccCCCEEEECCCchhhhhhhHHHHhcCCCEEEecCCCC--CCCceEEcCcCHHHhcccCCeEEECCChHHH
Confidence 99999999999999999999999999999999999999999999987 589 999999999998744789999999999
Q ss_pred hhhhHHHHHhhhcCeeEEEEEeeeccccchhhhccccccchhhhhhhhccccCCCchhHHHHhhccccCCceeEEEEEee
Q 012940 244 CLAPFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVMPQLKGKLNGIALRVP 323 (453)
Q Consensus 244 ~Lapvlk~L~d~fGI~~~~mTTiha~Tg~Q~llD~~~~d~rr~Raaa~NIIPt~tGaakav~kVlPeL~gKisgtavRVP 323 (453)
||+|++|+|||+|||+++.|||||+|||+|+++|++|+||||+|++++||||++||++|+++||||+|+|||+|+|+|||
T Consensus 156 ~Lap~lk~L~d~fGI~~~~mTTvha~T~~q~~~d~p~~d~r~~r~~a~NiIP~~tGaakav~kVlP~L~gkltg~avRVP 235 (342)
T 2ep7_A 156 CLAPCVKVLNEAFGVEKGYMVTVHAYTNDQRLLDLPHKDFRRARAAAINIVPTTTGAAKAIGEVIPELKGKLDGTARRVP 235 (342)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCSSTTTTSBGGGCCEEECCCTTGGGGGTSGGGTTTEEEEEEEES
T ss_pred HHHHHHHHHHHHcCeeEEEEEEEeecccchhhhcCCcchhhhhhhHhhCccCCCCChHHHHHHhhhccCCCEEEEEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecceeEEEEEEEEcc-CCCCHHHHHHHHHHcccC-------CCCcceeecccCeEeecCCCCCcceEEeCCCCceecCCe
Q 012940 324 TPNVSVVDLVVNVEK-KGITAEDVNAAFRKAAEG-------PLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDM 395 (453)
Q Consensus 324 v~~gs~vdltv~lek-~~vt~eeI~~al~~aa~~-------~lkgil~~~~~~~VS~Df~~~~~S~i~D~~~t~v~~~~~ 395 (453)
|++||++||+++|+| + +++|||+++|+++++| +|||||+|+|+|+||+||+|++||+|||+.+|+++ ++|
T Consensus 236 v~~~s~~dltv~lek~~-~t~eei~~~lk~a~~~~~~~~~~~lkgil~y~~~~~vS~d~~~~~~ssi~d~~~~~~~-~~~ 313 (342)
T 2ep7_A 236 VPDGSLIDLTVVVNKAP-SSVEEVNEKFREAAQKYRESGKVYLKEILQYCEDPIVSTDIVGNPHSAIFDAPLTQVI-DNL 313 (342)
T ss_dssp CSSCEEEEEEEEESSCC-SCHHHHHHHHHHHHHHHHTSCCGGGTTSEEEECSCCCGGGGTTCCCSEEEEGGGCEEE-TTE
T ss_pred ccceEEEEEEEEEcCCC-CCHHHHHHHHHHHhcCCcccccccccccccccCCCeEeeeECCCCccceecccccccc-CCE
Confidence 999999999999999 8 8999999999999999 99999999999999999999999999999999999 889
Q ss_pred EEEEEEecCCCchhhhHHHHHHHHHhcC
Q 012940 396 VKVVAWYDNEWGYSQRVVDLAHLVATKW 423 (453)
Q Consensus 396 vKl~~WYDNE~GYs~r~vdl~~~~~~~~ 423 (453)
+||++||||||||||||+||+.||+++|
T Consensus 314 vk~~~wyDNE~gys~r~~dl~~~~~~~~ 341 (342)
T 2ep7_A 314 VHIAAWYDNEWGYSCRLRDLVIYLAERG 341 (342)
T ss_dssp EEEEEEECTTHHHHHHHHHHHHHHHHC-
T ss_pred EEEEEEECCCccchhHHHHHHHHHHhcc
Confidence 9999999999999999999999998865
No 12
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=100.00 E-value=1.2e-112 Score=875.64 Aligned_cols=358 Identities=62% Similarity=0.990 Sum_probs=323.6
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeC
Q 012940 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (453)
Q Consensus 85 m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~ 164 (453)
|++||||||||||||.++|+|+++..++++||+||++.++++++|||+|||+||+|.++++. +++.|.++|+.|.++++
T Consensus 1 M~ikVgInGfGrIGr~vlR~l~~~~~~~veIVaInd~~d~~~~a~ll~yds~~G~~~~~v~~-~~~~l~v~g~~i~v~~~ 79 (380)
T 2d2i_A 1 MTIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISY-DENSITVNGKTMKIVCD 79 (380)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCSSCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEE-ETTEEEETTEEEEEECC
T ss_pred CCcEEEEECcCHHHHHHHHHHhcCCCCCEEEEEEecCCCHHHHHHhhcccccCCCCCCcEEE-eCCeEEECCeEEEEEec
Confidence 56899999999999999999998733579999999999999999999999999999999996 68899999999999999
Q ss_pred CCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCC-eEEeccCccccCccCCeEEecCCcchh
Q 012940 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIP-TYVVGVNEKDYDHEVANIVSNASCTTN 243 (453)
Q Consensus 165 ~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISaps~d~dvP-tvV~gVN~~~~~~~~~~IVSnaSCTTn 243 (453)
++|++++|++.++||||||||.|.+++++++|+++||||||||+|+++ ++| +||||||++.|++.+++||||||||||
T Consensus 80 ~dp~~l~w~~~gvDvV~e~TG~f~s~e~a~~hl~aGakkVVIs~ps~d-~~p~~~V~GVN~e~~~~~~~~IVSNasCtTn 158 (380)
T 2d2i_A 80 RNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGKA-EGVGTYVIGVNDSEYRHEDFAVISNASCTTN 158 (380)
T ss_dssp SCGGGCCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBS-SSCEECCTTTTGGGCCTTTCSEEECCCHHHH
T ss_pred CChHHCCcccCCCCEEEECCCccccHHHHHHHHHcCCcEEEEcCCCCC-CCCceEEcccCHHHhcccCCcEEECCchHHH
Confidence 999999998889999999999999999999999999999999999874 478 999999999998743789999999999
Q ss_pred hhhhHHHHHhhhcCeeEEEEEeeeccccchhhhccccccchhhhhhhhccccCCCchhHHHHhhccccCCceeEEEEEee
Q 012940 244 CLAPFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVMPQLKGKLNGIALRVP 323 (453)
Q Consensus 244 ~Lapvlk~L~d~fGI~~~~mTTiha~Tg~Q~llD~~~~d~rr~Raaa~NIIPt~tGaakav~kVlPeL~gKisgtavRVP 323 (453)
||+|++|+||++|||+++.|||||++||+|+++|++|+|||++|++++||||++||++++++||||+|+|||+++|+|||
T Consensus 159 ~lap~lk~L~d~fgI~~g~mTTvha~Tg~q~~vD~~~~d~r~gR~aa~NiIP~~Tgaakav~kvlPeL~gkl~g~avRVP 238 (380)
T 2d2i_A 159 CLAPVAKVLHDNFGIIKGTMTTTHSYTLDQRILDASHRDLRRARAAAVNIVPTTTGAAKAVALVIPELKGKLNGIALRVP 238 (380)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEEECCTTSCSSSCCCSSTTTTSCGGGCCEEEECCHHHHHHHHCGGGTTTEEEEEEEES
T ss_pred HHHHHHHHHHHhcCeeEEEEEEEeeccccchhhccchhhhhhcchHhhCeEeccCchHHHHHhhhHhhhCcEEEEEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecceeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCcceeecccCeEeecCCCCCcceEEeCCCCceecCCeEEEEEEec
Q 012940 324 TPNVSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYD 403 (453)
Q Consensus 324 v~~gs~vdltv~lek~~vt~eeI~~al~~aa~~~lkgil~~~~~~~VS~Df~~~~~S~i~D~~~t~v~~~~~vKl~~WYD 403 (453)
|++||+++|+++++++ +++|||+++|+++++|+|||||+|+|+|+||+||+|++||+|||+.+|++++++|+||++|||
T Consensus 239 t~~gs~~dlt~~l~k~-~t~eeI~~~lk~a~~~~lkgil~y~~~~~vS~d~~~~~~ssi~d~~~~~~~~~~~vk~~~wyD 317 (380)
T 2d2i_A 239 TPNVSVVDLVVQVEKP-TITEQVNEVLQKASQTTMKGIIKYSDLPLVSSDFRGTDESSIVDSSLTLVMDGDLVKVIAWYD 317 (380)
T ss_dssp CSSCEEEEEEEEESSC-CCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEEETTTEEEEEEEEC
T ss_pred cCCEEEEEEEEEECCc-CCHHHHHHHHHHHhhCCCCCccCCcCCCeeeeeeCCCCcceEEecccCceecCCEEEEEEEEC
Confidence 9999999999999998 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCchhhhHHHHHHHHHhcCCCCCCCCCCChhhhhhccCCCCcccccc
Q 012940 404 NEWGYSQRVVDLAHLVATKWPGVAAGGSGDPLEDFCQTNPADEECKVY 451 (453)
Q Consensus 404 NE~GYs~r~vdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (453)
|||||||||+||+.||+++| .+++|+++||+++|..+||++|
T Consensus 318 Ne~gys~r~~d~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 359 (380)
T 2d2i_A 318 NEWGYSQRVVDLAELAARKS------GRLGLVQTLLISSQDSLPLTGG 359 (380)
T ss_dssp TTHHHHHHHHHHHHHHHTTC------C---------------------
T ss_pred CCcchHhHHHHHHHHHHhhc------ccccccccccccCccccccccc
Confidence 99999999999999998865 6789999999999999999998
No 13
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=100.00 E-value=1.1e-107 Score=826.72 Aligned_cols=329 Identities=55% Similarity=0.878 Sum_probs=317.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeCCC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~~d 166 (453)
+||||||||||||+++|+|+++ +++||+|||+.++++++|||+|||+||+|+++++. +++.|.++|+.|.++++++
T Consensus 1 ikVgInG~G~IGr~vlr~l~~~---~~evvaind~~~~~~~a~ll~~ds~~G~~~~~v~~-~~~~l~v~g~~i~v~~~~d 76 (331)
T 2g82_O 1 MKVGINGFGRIGRQVFRILHSR---GVEVALINDLTDNKTLAHLLKYDSIYHRFPGEVAY-DDQYLYVDGKAIRATAVKD 76 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH---TCCEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEE-CSSEEEETTEEEEEECCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhC---CCEEEEEecCCCHHHHhHhhhccccCCCCCceEEE-cCCEEEECCEEEEEEecCC
Confidence 5899999999999999999987 48999999999999999999999999999999996 6889999999999998889
Q ss_pred CCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEeccCccccCccCCeEEecCCcchhhhh
Q 012940 167 PLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLA 246 (453)
Q Consensus 167 p~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISaps~d~dvPtvV~gVN~~~~~~~~~~IVSnaSCTTn~La 246 (453)
|++++|++.++|+||||||.|++++++++|+++||||||||+|+++ ++|+||||||++.|++..++||||||||||||+
T Consensus 77 p~~l~w~~~gvDiV~estG~~~s~e~a~~~l~aGakkvVIsaps~d-~~p~vV~gVN~~~~~~~~~~IIsnasCtTn~la 155 (331)
T 2g82_O 77 PKEIPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPAKG-EDITIVMGVNHEAYDPSRHHIISNASCTTNSLA 155 (331)
T ss_dssp GGGSCTTTTTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBS-CSEECCTTTTGGGCCTTTCCEEECCCHHHHHHH
T ss_pred hhhCcccccCCCEEEECCCchhhHHHHHHHHHCCCCEEEECCCCcC-CCCEEeeccCHHHhCcCCCCEEECCChHHHHHH
Confidence 9999999999999999999999999999999999999999999974 589999999999998622689999999999999
Q ss_pred hHHHHHhhhcCeeEEEEEeeeccccchhhhccccccchhhhhhhhccccCCCchhHHHHhhccccCCceeEEEEEeeecc
Q 012940 247 PFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVMPQLKGKLNGIALRVPTPN 326 (453)
Q Consensus 247 pvlk~L~d~fGI~~~~mTTiha~Tg~Q~llD~~~~d~rr~Raaa~NIIPt~tGaakav~kVlPeL~gKisgtavRVPv~~ 326 (453)
|++||||++|||+++.|||||++||+|+++|++|+||||+|++++||||+++|++|+++||||+|+|||+++|+||||++
T Consensus 156 p~lk~L~~~fgI~~~~mtTvha~Tg~q~~~d~~~~d~r~~r~~a~NiIP~~tGaakav~kIlp~L~gkl~g~a~RVPv~~ 235 (331)
T 2g82_O 156 PVMKVLEEAFGVEKALMTTVHSYTNDQRLLDLPHKDLRRARAAAINIIPTTTGAAKATALVLPSLKGRFDGMALRVPTAT 235 (331)
T ss_dssp HHHHHHHHHTCEEEEEEEEEEECCTTSBSSSCCCSSTTTTSBGGGCCEEECCCHHHHHTTTCGGGTTSEEEEEEEESCSS
T ss_pred HHHHHHHHhcCccEEEEEEEeecccccchhccccccccccchhhhCccccCCCchhhhhhhHHhcCCCEEEEEEEeCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCcceeecccCeEeecCCCCCcceEEeCCCCceecCCeEEEEEEecCCC
Q 012940 327 VSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEW 406 (453)
Q Consensus 327 gs~vdltv~lek~~vt~eeI~~al~~aa~~~lkgil~~~~~~~VS~Df~~~~~S~i~D~~~t~v~~~~~vKl~~WYDNE~ 406 (453)
||++||+++++++ +|+|||+++|+++++|+|||||+|+|+|+||+||+|++||+|||+.+|+++ ++|+||++||||||
T Consensus 236 gs~~dl~v~l~k~-~t~eei~~~lk~a~~~~l~gil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~-~~~~k~~~wydne~ 313 (331)
T 2g82_O 236 GSISDITALLKRE-VTAEEVNAALKAAAEGPLKGILAYTEDEIVLQDIVMDPHSSIVDAKLTKAL-GNMVKVFAWYDNEW 313 (331)
T ss_dssp CEEEEEEEEESSC-CCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEEE-TTEEEEEEEECTTH
T ss_pred EEEEEEEEEECCC-CCHHHHHHHHHHhhcCccCCccCCCCCCeeeeeeCCCCccceecchhcccc-CCEEEEEEEECCCc
Confidence 9999999999998 899999999999999999999999999999999999999999999999999 78999999999999
Q ss_pred chhhhHHHHHHHHHhc
Q 012940 407 GYSQRVVDLAHLVATK 422 (453)
Q Consensus 407 GYs~r~vdl~~~~~~~ 422 (453)
||||||+||+.||+++
T Consensus 314 gys~r~~d~~~~~~~~ 329 (331)
T 2g82_O 314 GYANRVADLVELVLRK 329 (331)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhc
Confidence 9999999999999875
No 14
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=100.00 E-value=2.9e-106 Score=817.96 Aligned_cols=336 Identities=82% Similarity=1.294 Sum_probs=323.2
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeCC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~~ 165 (453)
++||||||||||||.++|+|+++.+|++|||+|||..++++++|||+|||+||+|.+++...+++.|.++|+.|.+++++
T Consensus 1 ~ikVgInG~G~IGr~llR~l~~~~~p~~eivaInd~~~~~~~a~ll~sds~~G~~~~~v~~~~~~~l~v~g~~i~v~~~~ 80 (337)
T 1rm4_O 1 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTGGVKQASHLLKYDSILGTFDADVKTAGDSAISVDGKVIKVVSDR 80 (337)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTCSSCSEEEEEEECTTCHHHHHHHHHCCTTTCSCSSCEEECTTSEEEETTEEEEEECCS
T ss_pred CeEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEEcCCCHHHHHHHhcccccCCCccceeEEecCCeEEECCeEEEEEecC
Confidence 47999999999999999999988667899999999999999999999999999999999833677899999999999999
Q ss_pred CCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEeccCccccCccCCeEEecCCcchhhh
Q 012940 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCL 245 (453)
Q Consensus 166 dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISaps~d~dvPtvV~gVN~~~~~~~~~~IVSnaSCTTn~L 245 (453)
+|++++|+++++|+||||||.|++++.+++|+++|||+|++|+|.++ ++|+||||||++.|++. ++||||||||||||
T Consensus 81 dp~~i~w~~~gvDiV~eatg~~~s~e~a~~~l~~Gak~V~iSap~r~-d~p~~V~GVN~~~~~~~-~~IIsNasCtTn~l 158 (337)
T 1rm4_O 81 NPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKG-DIPTYVVGVNEEGYTHA-DTIISNASCTTNCL 158 (337)
T ss_dssp CGGGSCHHHHTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBS-SCCBCCTTTTGGGCCTT-CSEEECCCHHHHHH
T ss_pred ChhhCcccccCCCEEEECCCchhhHHHHHHHHHcCCEEEEECCcccC-CCCeEeecCCHHHhCCC-CeEEECCChHHHHH
Confidence 99999999889999999999999999999999999999999999874 68999999999999865 78999999999999
Q ss_pred hhHHHHHhhhcCeeEEEEEeeeccccchhhhccccccchhhhhhhhccccCCCchhHHHHhhccccCCceeEEEEEeeec
Q 012940 246 APFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVMPQLKGKLNGIALRVPTP 325 (453)
Q Consensus 246 apvlk~L~d~fGI~~~~mTTiha~Tg~Q~llD~~~~d~rr~Raaa~NIIPt~tGaakav~kVlPeL~gKisgtavRVPv~ 325 (453)
+|++|+||++|||+++.|||||++||+|+++|++|+||||+|++++||||++||++++++|+||+|+|||+++|+||||+
T Consensus 159 ap~lk~L~~~fgI~~~~mtTvha~Tgaq~l~d~~~~~~r~~r~~a~NiiP~~tgaakav~kvlPel~gkl~~~a~RVP~~ 238 (337)
T 1rm4_O 159 APFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTP 238 (337)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEEECCTTSCSSSCCCSSTTTTSCTTTCCEEECCCHHHHHHHHCGGGTTTEEEEEEEESCS
T ss_pred HHHHHHHHHhcCeeEEEEEEEEecCCccchhhcchhhhccchhhhcCcccccchhhHHHHhhhhhhcCcEEEEEEEecCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCcceeecccCeEeecCCCCCcceEEeCCCCceecCCeEEEEEEecCC
Q 012940 326 NVSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNE 405 (453)
Q Consensus 326 ~gs~vdltv~lek~~vt~eeI~~al~~aa~~~lkgil~~~~~~~VS~Df~~~~~S~i~D~~~t~v~~~~~vKl~~WYDNE 405 (453)
+||+++|+++++++ +|+|||+++|+++++|+|||||+|+|+|+||+||+|++||+|||+.+|++++++|+||++|||||
T Consensus 239 ~gs~~dl~~~l~k~-~t~eei~~~lk~a~~~~lkgil~y~~~~~vs~d~~~~~~s~i~d~~~~~~~~~~~~k~~~wydne 317 (337)
T 1rm4_O 239 NVSVVDLVVQVSKK-TFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRCTDVSSTIDSSLTMVMGDDMVKVIAWYDNE 317 (337)
T ss_dssp SCEEEEEEEEESSC-CCHHHHHHHHHHHHTTTTTTTEEEECSCCCGGGGTTCCSSEEEEGGGCEEETTTEEEEEEEECTT
T ss_pred CEEEEEEEEEECCC-CCHHHHHHHHHHHhhCCcCceecCcCCCeeecccCCCCcccccchhccceecCCEEEEEEEECCC
Confidence 99999999999998 89999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhhhHHHHHHHHHhcCC
Q 012940 406 WGYSQRVVDLAHLVATKWP 424 (453)
Q Consensus 406 ~GYs~r~vdl~~~~~~~~~ 424 (453)
|||||||+||+.||++++.
T Consensus 318 ~gys~r~~d~~~~~~~~~~ 336 (337)
T 1rm4_O 318 WGYSQRVVDLADIVANKWQ 336 (337)
T ss_dssp HHHHHHHHHHHHHHHHTCC
T ss_pred ccchhhHHHHHHHHhhhcc
Confidence 9999999999999988643
No 15
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=100.00 E-value=1.1e-105 Score=814.64 Aligned_cols=337 Identities=66% Similarity=1.082 Sum_probs=323.5
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeC
Q 012940 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (453)
Q Consensus 85 m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~ 164 (453)
|++||||||||||||.++|+|+++..++++||+|||+.++++++|||+|||+||+|.++++. +++.|.++|+.|.++++
T Consensus 1 M~ikVgI~G~G~IGr~v~r~l~~~~~~~~evvaInd~~~~~~~~~l~~~ds~~G~~~~~v~~-~~~~l~v~g~~i~v~~~ 79 (339)
T 3b1j_A 1 MTIRVAINGFGRIGRNFLRCWFGRQNTDLEVVAINNTSDARTAAHLLEYDSVLGRFNADISY-DENSITVNGKTMKIVCD 79 (339)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHCSCCSEEEEEEECSSCHHHHHHHHHCCTTTCCCCSCEEE-ETTEEEETTEEEEEECC
T ss_pred CceEEEEECCCHHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHhccccccCCCCCcEEE-cCCeeeecCceEEEEec
Confidence 56899999999999999999998733579999999999999999999999999999999996 68899999999999999
Q ss_pred CCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCC-eEEeccCccccCccCCeEEecCCcchh
Q 012940 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIP-TYVVGVNEKDYDHEVANIVSNASCTTN 243 (453)
Q Consensus 165 ~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISaps~d~dvP-tvV~gVN~~~~~~~~~~IVSnaSCTTn 243 (453)
++|++++|++.++|+||||||.|.+++.+++|+++||||||||+|+++ ++| ++|||||++.|++..++||||||||||
T Consensus 80 ~dp~~l~w~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~~~~-~~p~~~V~gVN~~~~~~~~~~IISnasCtTn 158 (339)
T 3b1j_A 80 RNPLNLPWKEWDIDLVIESTGVFVTAEGASKHIQAGAKKVLITAPGKG-EGVGTYVIGVNDSEYRHEDFAVISNASCTTN 158 (339)
T ss_dssp SCGGGSCTTTTTCCEEEECSSSCCBHHHHHHHHHTTCSEEEESSCCBS-SSCEECCTTTTGGGCCTTTCSEEECCCHHHH
T ss_pred CChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCcEEEEeCCCCC-CCCeeEEcccCHHHhCcCCCeEEECCcchhh
Confidence 999999999889999999999999999999999999999999999873 478 999999999998744789999999999
Q ss_pred hhhhHHHHHhhhcCeeEEEEEeeeccccchhhhccccccchhhhhhhhccccCCCchhHHHHhhccccCCceeEEEEEee
Q 012940 244 CLAPFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVMPQLKGKLNGIALRVP 323 (453)
Q Consensus 244 ~Lapvlk~L~d~fGI~~~~mTTiha~Tg~Q~llD~~~~d~rr~Raaa~NIIPt~tGaakav~kVlPeL~gKisgtavRVP 323 (453)
||+|++|+||++|||+++.|||||+|||+|+++|++|+||||+|++++||||++||++++++||+|+|+|||+++|+|||
T Consensus 159 ~lap~lk~L~~~fgI~~~~~tTvha~Tg~q~~vd~~~~d~r~~r~a~~NiiP~~tgaakav~kVlpeL~gkl~g~a~rVP 238 (339)
T 3b1j_A 159 CLAPVAKVLHDNFGIIKGTMTTTHSYTLDQRILDASHRDLRRARAAAVNIVPTTTGAAKAVALVIPELKGKLNGIALRVP 238 (339)
T ss_dssp HHHHHHHHHHHHTCEEEEEEEEEEECCTTSCSSSCCCSSTTTTSCTTSCCEEEECSHHHHHHHHCGGGTTTEEEEEEEES
T ss_pred HHHHHHHHHHHhCCeeEEEEEEEEeecCCchhcccchhhhhccccHHHceEcccCchHHHHHHHhHhhcCcEEEEEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecceeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCcceeecccCeEeecCCCCCcceEEeCCCCceecCCeEEEEEEec
Q 012940 324 TPNVSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYD 403 (453)
Q Consensus 324 v~~gs~vdltv~lek~~vt~eeI~~al~~aa~~~lkgil~~~~~~~VS~Df~~~~~S~i~D~~~t~v~~~~~vKl~~WYD 403 (453)
|++||+++++++++++ +++|||+++|+++++|+|||||+|+|+|+||+||+|++||+|||+.+|++++++|+||++|||
T Consensus 239 ~~~g~~~dl~v~l~k~-~t~eeI~~~lk~a~~~~l~gil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wyd 317 (339)
T 3b1j_A 239 TPNVSVVDLVVQVEKP-TITEQVNEVLQKASQTTMKGIIKYSDLPLVSSDFRGTDESSIVDSSLTLVMDGDLVKVIAWYD 317 (339)
T ss_dssp CSSCEEEEEEEEESSC-CCHHHHHHHHHHHHHSTTBTTEEEECSCCCGGGGTTCCSSEEEEGGGCEEETTTEEEEEEEEC
T ss_pred cCCEEEEEEEEEEcCc-CCHHHHHHHHHHhhcCCCCCccCccCCceeehhcCCCCCceEEecccCceecCCEEEEEEEeC
Confidence 9999999999999998 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCchhhhHHHHHHHHHhcCC
Q 012940 404 NEWGYSQRVVDLAHLVATKWP 424 (453)
Q Consensus 404 NE~GYs~r~vdl~~~~~~~~~ 424 (453)
|||||||||+||+.||+++|.
T Consensus 318 ne~gys~r~~d~~~~~~~~~~ 338 (339)
T 3b1j_A 318 NEWGYSQRVVDLAELAARKWA 338 (339)
T ss_dssp TTHHHHHHHHHHHHHHHHTCC
T ss_pred CCcchHhHHHHHHHHHhhhcc
Confidence 999999999999999988753
No 16
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=100.00 E-value=2.9e-104 Score=802.64 Aligned_cols=331 Identities=60% Similarity=0.931 Sum_probs=319.2
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeCCC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~~d 166 (453)
+||||||||||||+++|+|.++ ++++||+||+..++++++|||+|||+||+|.++++. +++.|.++|+.|.++++++
T Consensus 2 ikVgI~G~G~iGr~l~R~l~~~--~~veivain~~~~~~~~~~ll~~ds~~G~~~~~v~~-~~~~l~v~g~~i~v~~~~d 78 (334)
T 3cmc_O 2 VKVGINGFGRIGRNVFRAALKN--PDIEVVAVNDLTDANTLAHLLKYDSVHGRLDAEVSV-NGNNLVVNGKEIIVKAERD 78 (334)
T ss_dssp EEEEEESCSHHHHHHHHHHTTC--TTEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEE-ETTEEEETTEEEEEECCSS
T ss_pred eEEEEECCCHHHHHHHHHHhCC--CCeEEEEEeCCCCHHHHHHHhccCCcCCCcCceEEE-ccCcEEECCEEEEEEecCC
Confidence 7999999999999999999887 579999999998999999999999999999999996 6889999999999998899
Q ss_pred CCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEeccCccccCccCCeEEecCCcchhhhh
Q 012940 167 PLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLA 246 (453)
Q Consensus 167 p~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISaps~d~dvPtvV~gVN~~~~~~~~~~IVSnaSCTTn~La 246 (453)
|++++|++.++|+||||||.|++++.+++|+++||||||||+|+++ ++|++|||||++.|++..++||||||||||||+
T Consensus 79 p~~i~w~~~~vDvV~~atg~~~s~e~a~~~l~~Gak~vVId~pa~d-~~p~~V~eVN~~~i~~~~~~IIsNpsCttn~la 157 (334)
T 3cmc_O 79 PENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAPAKN-EDITIVMGVNQDKYDPKAHHVISNASCTTNCLA 157 (334)
T ss_dssp GGGCCTGGGTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCBS-CSEECCTTTSGGGCCTTTCCEEECCCHHHHHHH
T ss_pred hhhcCcccCccCEEEECCCchhhHHHHHHHHHCCCCEEEEeCCCcc-CCCEeccccCHHHhCccCCeEEECCChHHHHHH
Confidence 9999999899999999999999999999999999999999999874 479999999999998622689999999999999
Q ss_pred hHHHHHhhhcCeeEEEEEeeeccccchhhhccccccchhhhhhhhccccCCCchhHHHHhhccccCCceeEEEEEeeecc
Q 012940 247 PFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVMPQLKGKLNGIALRVPTPN 326 (453)
Q Consensus 247 pvlk~L~d~fGI~~~~mTTiha~Tg~Q~llD~~~~d~rr~Raaa~NIIPt~tGaakav~kVlPeL~gKisgtavRVPv~~ 326 (453)
|++||||++|||+++.|||||++||+|+++|++|+|+||+|++++||||++||++++++|+||+|+|||+++|+||||++
T Consensus 158 p~lkpL~~~~gI~~~~mtTvha~Sg~q~~~d~~~~~~r~~r~~a~NiiP~~tg~a~ei~kvlp~l~gkl~~~a~rVP~~~ 237 (334)
T 3cmc_O 158 PFAKVLHEQFGIVRGMMTTVHSYTNDQRILDLPHKDLRRARAAAESIIPTTTGAAKAVALVLPELKGKLNGMAMRVPTPN 237 (334)
T ss_dssp HHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCSSTTTTSBTTTCCEEEECSHHHHHHHHCGGGTTTEEEEEEEESCSS
T ss_pred HHHHHHHHhcCceeeeEEEEEeccchhhhccccccccccchhhhhCEEeeccCcccchhhhChhhcCcEEEEEEEECCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCcceeecccCeEeecCCCCCcceEEeCCCCceecCCeEEEEEEecCCC
Q 012940 327 VSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNEW 406 (453)
Q Consensus 327 gs~vdltv~lek~~vt~eeI~~al~~aa~~~lkgil~~~~~~~VS~Df~~~~~S~i~D~~~t~v~~~~~vKl~~WYDNE~ 406 (453)
||+++++++++++ +|+|||+++|+++++|+|||||+|+|+|+||+||+|++||+|||+.+|++++++|+||++||||||
T Consensus 238 gs~~~l~~~l~k~-~t~eei~~~lk~a~~~~l~gil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne~ 316 (334)
T 3cmc_O 238 VSVVDLVAELEKE-VTVEEVNAALKAAAEGELKGILAYSEEPLVSRDYNGSTVSSTIDALSTMVIDGKMVKVVSWYDNET 316 (334)
T ss_dssp CEEEEEEEEESSC-CCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCSSEEEEGGGCEEETTTEEEEEEEECTTH
T ss_pred EEEEEEEEEECCC-CCHHHHHHHHHHHhhCccCCcccCCCCCEeeeeeCCCCccceeccccCeEecCCEEEEEEEeCCCc
Confidence 9999999999998 899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhHHHHHHHHHhc
Q 012940 407 GYSQRVVDLAHLVATK 422 (453)
Q Consensus 407 GYs~r~vdl~~~~~~~ 422 (453)
||||||+||+.||+++
T Consensus 317 gys~r~~d~~~~~~~~ 332 (334)
T 3cmc_O 317 GYSHRVVDLAAYIASK 332 (334)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred hhhhHHHHHHHHHHhc
Confidence 9999999999999875
No 17
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=6.5e-103 Score=792.22 Aligned_cols=330 Identities=55% Similarity=0.854 Sum_probs=317.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeCCC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~~d 166 (453)
+||||||||||||+++|+|.++..|+++||+||+..++++++|||+|||+||+|.++++. +++.|.++|+.|.++++++
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~~~~~~~~~~ll~~ds~~g~~~~~v~~-~~~~l~v~g~~i~v~~~~d 79 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEY-TENSLIVDGKEIKVFAEPD 79 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEE-CSSEEEETTEEEEEECCSS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEcCCChHHhhhhccCcCcCCCcCCcEEE-cCCEEEECCeEEEEEecCC
Confidence 589999999999999999988733579999999988999999999999999999999996 6899999999999988889
Q ss_pred CCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCC-eEEeccCccccCccCCeEEecCCcchhhh
Q 012940 167 PLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIP-TYVVGVNEKDYDHEVANIVSNASCTTNCL 245 (453)
Q Consensus 167 p~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISaps~d~dvP-tvV~gVN~~~~~~~~~~IVSnaSCTTn~L 245 (453)
|++++|++.++|+||||||.|++++.+++|+++||||||||+|++ |+| ++|||||++.|++. ++||||||||||||
T Consensus 80 p~~l~w~~~~vDvV~~atg~~~s~e~a~~~l~aGakkvVId~~a~--d~p~~~V~eVN~~~i~~~-~~iIsNpsCttn~l 156 (332)
T 1hdg_O 80 PSKLPWKDLGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPAK--GEDITVVIGCNEDQLKPE-HTIISCASCTTNSI 156 (332)
T ss_dssp GGGSCHHHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCB--SCSEECCTTTTGGGCCTT-CCEEECCCHHHHHH
T ss_pred hHHCcccccCCCEEEECCccchhHHHHHHHHHcCCcEEEEeCCCC--CCCceEEeccCHHHhCCC-CcEEECCccHHHHH
Confidence 999999988999999999999999999999999999999999986 478 99999999999863 68999999999999
Q ss_pred hhHHHHHhhhcCeeEEEEEeeeccccchhhhccccccchhhhhhhhccccCCCchhHHHHhhccccCCceeEEEEEeeec
Q 012940 246 APFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVMPQLKGKLNGIALRVPTP 325 (453)
Q Consensus 246 apvlk~L~d~fGI~~~~mTTiha~Tg~Q~llD~~~~d~rr~Raaa~NIIPt~tGaakav~kVlPeL~gKisgtavRVPv~ 325 (453)
+|+||||+++|||+++.|||||++||+|+++|++|+|+||+|++++||||++||++++++++||+|+|||+++|+||||+
T Consensus 157 ap~lkpL~~~~gI~~~~~ttvha~Sg~q~~~d~~~~~~~~~r~~a~NiiP~~tg~a~ei~kvLp~l~gkl~~~a~rVP~~ 236 (332)
T 1hdg_O 157 APIVKVLHEKFGIVSGMLTTVHSYTNDQRVLDLPHKDLRRARAAAVNIIPTTTGAAKAVALVVPEVKGKLDGMAIRVPTP 236 (332)
T ss_dssp HHHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCSSTTTTSBGGGCCEEECCTHHHHHHHHCGGGTTTEEEEEEEESCS
T ss_pred HHHHHHHHHhcCeeEeEEEEEEeccchhhhhcCcccccccchhHhhCcccccCCcccchhhhCccccCCEEEEeEEcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCcceeecccCeEeecCCCCCcceEEeCCCCceecCCeEEEEEEecCC
Q 012940 326 NVSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNE 405 (453)
Q Consensus 326 ~gs~vdltv~lek~~vt~eeI~~al~~aa~~~lkgil~~~~~~~VS~Df~~~~~S~i~D~~~t~v~~~~~vKl~~WYDNE 405 (453)
+||+++++++++++ +++|||+++|+++++|+|||||+|+|+|+||+||+|++||+|||+.+|++++++|+||++|||||
T Consensus 237 ~g~l~~l~~~l~k~-~t~eei~~~lk~a~~~~l~gil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne 315 (332)
T 1hdg_O 237 DGSITDLTVLVEKE-TTVEEVNAVMKEATEGRLKGIIGYNDEPIVSSDIIGTTFSGIFDATITNVIGGKLVKVASWYDNE 315 (332)
T ss_dssp SCEEEEEEEEESSC-CCHHHHHHHHHHHHTTTTTTTEEEECSCCCGGGGTTCCCSEEEETTTCEEETTTEEEEEEEECTT
T ss_pred CcEEEEEEEEECCC-CCHHHHHHHHHHHhhcccCCcccccCCCeeeeeeCCCCccceeccccCeEecCCEEEEEEEeCCC
Confidence 99999999999998 89999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhhhHHHHHHHHHh
Q 012940 406 WGYSQRVVDLAHLVAT 421 (453)
Q Consensus 406 ~GYs~r~vdl~~~~~~ 421 (453)
|||||||+||+.||++
T Consensus 316 ~gys~r~~d~~~~~~~ 331 (332)
T 1hdg_O 316 YGYSNRVVDTLELLLK 331 (332)
T ss_dssp HHHHHHHHHHHHHGGG
T ss_pred ccchhHHHHHHHHHhc
Confidence 9999999999999864
No 18
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=100.00 E-value=3.5e-103 Score=799.79 Aligned_cols=334 Identities=47% Similarity=0.792 Sum_probs=316.8
Q ss_pred cceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC-CCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEE
Q 012940 84 VAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND-SGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVV 162 (453)
Q Consensus 84 ~m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd-~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~ 162 (453)
++++||||||||||||.++|+|+++ |++|||+||| ..++++++|||+|||+||+|++.++. +++.|.++|+.|.++
T Consensus 15 ~~~ikVgI~G~G~iGr~llR~l~~~--p~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~-~~~~l~v~g~~i~v~ 91 (354)
T 3cps_A 15 YFQGTLGINGFGRIGRLVLRACMER--NDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEV-SGKDLCINGKVVKVF 91 (354)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHTC--SSCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEE-CC-CEEETTEEEEEE
T ss_pred CcceEEEEECCCHHHHHHHHHHHcC--CCeEEEEecCCCCChhHhhhhhcccccCCCCCCcEEE-eCCEEEECCeEEEEE
Confidence 4458999999999999999999987 5699999999 68999999999999999999999986 688999999999999
Q ss_pred eCCCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEeccCccccCccCCeEEecCCcch
Q 012940 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTT 242 (453)
Q Consensus 163 ~~~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISaps~d~dvPtvV~gVN~~~~~~~~~~IVSnaSCTT 242 (453)
++++|++++|++.++|+||||||.|.+++.+++|+++||||||||+|+++ ++|++|||||++.|++.+++|||||||||
T Consensus 92 ~~~dp~~i~w~~~~vDvV~eatg~~~s~e~a~~~l~~GakkvVId~padd-~~p~~V~GVN~~~~~~~~~~IISNpsCtT 170 (354)
T 3cps_A 92 QAKDPAEIPWGASGAQIVCESTGVFTTEEKASLHLKGGAKKVIISAPPKD-NVPMYVMGVNNTEYDPSKFNVISNASCTT 170 (354)
T ss_dssp CCSCGGGCCHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCCSS-CCCBCCTTTTGGGCCTTTCSEEECCCHHH
T ss_pred ecCChHHCCcccCCCCEEEECCCchhhHHHHHHHHHcCCcEEEEeCCCCC-CCCEEEeccCHHHhCcCCCcEEECCCcHH
Confidence 99999999998889999999999999999999999999999999999864 47999999999999863368999999999
Q ss_pred hhhhhHHHHHhhhcCeeEEEEEeeeccccchhhhcccc---ccchhhhhhhhccccCCCchhHHHHhhccccCCceeEEE
Q 012940 243 NCLAPFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASH---RDLRRARAAALNIVPTSTGAAKAVSLVMPQLKGKLNGIA 319 (453)
Q Consensus 243 n~Lapvlk~L~d~fGI~~~~mTTiha~Tg~Q~llD~~~---~d~rr~Raaa~NIIPt~tGaakav~kVlPeL~gKisgta 319 (453)
|||+|++|||+++|||+++.|||||++||+|+++|+++ +|||++|++++||||+++|++++++++||+|+|||++++
T Consensus 171 n~lap~lkpL~~~~gI~~g~mtTvha~Tg~q~~vd~~~~~~k~~r~~r~aa~NiiP~~tG~akei~kvlp~l~gkl~~~a 250 (354)
T 3cps_A 171 NCLAPLAKIINDKFGIVEGLMTTVHSLTANQLTVDGPSKGGKDWRAGRCAGNNIIPASTGAAKAVGKVIPALNGKLTGMA 250 (354)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEEEEEECCTTSCSSSCCCCC--CCGGGSCTTSCCEEEECCHHHHHHHHSGGGTTTEEEEE
T ss_pred HHHHHHHHHHHHhCCeeEEEEEEEecccccchhhhccchhccccccccchhccEEecCcCHHHHHHHHHHhcCCcEEEEE
Confidence 99999999999999999999999999999999999998 899999999999999999999999999999999999999
Q ss_pred EEeeecceeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCcceeecccCeEeecCCCCCcceEEeCCCCceecCCeEEEE
Q 012940 320 LRVPTPNVSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVV 399 (453)
Q Consensus 320 vRVPv~~gs~vdltv~lek~~vt~eeI~~al~~aa~~~lkgil~~~~~~~VS~Df~~~~~S~i~D~~~t~v~~~~~vKl~ 399 (453)
+||||++||+++++++++++ +++|||+++|+++++|+|||||+|+|+|+||+||+|++||+|||+.+|++++++|+||+
T Consensus 251 ~rVP~~~gs~~dl~~~l~k~-~t~eeI~~~~k~a~~~~lkgil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~ 329 (354)
T 3cps_A 251 IRVPTPDVSVVDLTCKLAKP-ASIEEIYQAVKEASNGPMKGIMGYTSDDVVSTDFIGCKYSSIFDKNACIALNDSFVKLI 329 (354)
T ss_dssp EEESCSSCEEEEEEEEESSC-CCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEEGGGCEEEETTEEEEE
T ss_pred EEeccCCEEEEEEEEEECCC-CCHHHHHHHHHHHhhCCCCCccCccCCCeeeEEEcCCCcceEEecccCeEecCCEEEEE
Confidence 99999999999999999998 89999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCchhhhHHHHHHHHHhc
Q 012940 400 AWYDNEWGYSQRVVDLAHLVATK 422 (453)
Q Consensus 400 ~WYDNE~GYs~r~vdl~~~~~~~ 422 (453)
+||||||||||||+||+.||+++
T Consensus 330 ~wydne~gys~r~~d~~~~~~~~ 352 (354)
T 3cps_A 330 SWYDNESGYSNRLVDLAVYVASR 352 (354)
T ss_dssp EEECTTHHHHHHHHHHHHHHHHT
T ss_pred EEECCCcchHhHHHHHHHHHHhc
Confidence 99999999999999999999875
No 19
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=100.00 E-value=3.5e-102 Score=786.32 Aligned_cols=327 Identities=48% Similarity=0.803 Sum_probs=316.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeCCC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~~d 166 (453)
+||||||||||||+++|+|.++ |+++||+||+..++++++|||+|||+||+|++.++. +++.|.++|++|.++++++
T Consensus 2 ikVgI~G~G~iG~~l~R~l~~~--~~veiv~i~~~~~~~~~a~l~~~ds~~g~~~~~v~~-~~~~l~v~g~~i~v~~~~d 78 (330)
T 1gad_O 2 IKVGINGFGRIGRIVFRAAQKR--SDIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEV-KDGHLIVNGKKIRVTAERD 78 (330)
T ss_dssp EEEEEECCSHHHHHHHHHHHTC--SSEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEE-ETTEEEETTEEEEEECCSS
T ss_pred eEEEEECcCHHHHHHHHHHHcC--CCeEEEEEcCCCChhHHhHhhcccccCCCCCCeEEE-cCCEEEECCEEEEEEEcCC
Confidence 7999999999999999999987 579999999988999999999999999999999986 6889999999999999999
Q ss_pred CCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEeccCccccCccCCeEEecCCcchhhhh
Q 012940 167 PLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLA 246 (453)
Q Consensus 167 p~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISaps~d~dvPtvV~gVN~~~~~~~~~~IVSnaSCTTn~La 246 (453)
|+++||++.++|+||||||.|.+++.+++|+++|+|+|++|+|.++ ++|++|||||++.|+ . ++||||||||||||+
T Consensus 79 p~~i~w~~~~vDvVf~atg~~~s~e~a~~~l~~GakvVdlSa~~~~-~~p~~V~GvN~~~~~-~-~~iIsNpsCtt~~la 155 (330)
T 1gad_O 79 PANLKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSKD-NTPMFVKGANFDKYA-G-QDIVSNASCTTNCLA 155 (330)
T ss_dssp GGGGCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSS-SCCBCCTTTTGGGCC-S-CSEEECCCHHHHHHH
T ss_pred hhhCccccccCCEEEECCCccccHHHHHHHHHCCCEEEEECCCCCC-CCCeEeecCCHHHhC-C-CCEEEcCChHHHHHH
Confidence 9999998889999999999999999999999999999999999843 579999999999998 3 789999999999999
Q ss_pred hHHHHHhhhcCeeEEEEEeeeccccchhhhcccc-ccchhhhhhhhccccCCCchhHHHHhhccccCCceeEEEEEeeec
Q 012940 247 PFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASH-RDLRRARAAALNIVPTSTGAAKAVSLVMPQLKGKLNGIALRVPTP 325 (453)
Q Consensus 247 pvlk~L~d~fGI~~~~mTTiha~Tg~Q~llD~~~-~d~rr~Raaa~NIIPt~tGaakav~kVlPeL~gKisgtavRVPv~ 325 (453)
|++||||++|||+++.|||+|++||+|+++|+++ +|+||+|++++||||+++|++++++++||+|+|||+++|+||||+
T Consensus 156 p~lkpL~~~~gI~~~~~ttvha~Tg~q~~vd~~~~~~~~~~r~~~~NiiP~~tg~a~ei~kvlpel~gkl~~~a~rVP~~ 235 (330)
T 1gad_O 156 PLAKVINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTP 235 (330)
T ss_dssp HHHHHHHHHHCEEEEEEEEEECCCTTSBSSSCCCSSCGGGGSBTTTCCEEEECCTTTTHHHHSGGGTTSEEEEEEECSCS
T ss_pred HHHHHHHHhcCeeEEEEEEEEecccccccccccccCCCccccchhhCeEEcCCCcchhHHHHHHHhcCcEEEEEEEeccc
Confidence 9999999999999999999999999999999998 789999999999999999999999999999999999999999999
Q ss_pred ceeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCcceeecccCeEeecCCCCCcceEEeCCCCceecCCeEEEEEEecCC
Q 012940 326 NVSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNE 405 (453)
Q Consensus 326 ~gs~vdltv~lek~~vt~eeI~~al~~aa~~~lkgil~~~~~~~VS~Df~~~~~S~i~D~~~t~v~~~~~vKl~~WYDNE 405 (453)
+||+++++++++++ +++|||+++|+++++|+|||||+|+|+|+||+||+|++||+|||+.+|++++++|+||++|||||
T Consensus 236 ~g~~~~l~~~l~k~-~t~eei~~~~k~a~~~~l~gil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wydne 314 (330)
T 1gad_O 236 NVSVVDLTVRLEKA-ATYEQIKAAVKAAAEGEMKGVLGYTEDDVVSTDFNGEVCTSVFDAKAGIALNDNFVKLVSWYDNE 314 (330)
T ss_dssp SCEEEEEEEEESSC-CCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCSSEEEETTTCEEEETTEEEEEEEECTT
T ss_pred cEEEEEEEEEECCC-CCHHHHHHHHHHHhcCCCCCEEeeECCceeeeeECCCCcceEEecccCeEecCCEEEEEEEECCC
Confidence 99999999999998 89999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhhhHHHHHHHHH
Q 012940 406 WGYSQRVVDLAHLVA 420 (453)
Q Consensus 406 ~GYs~r~vdl~~~~~ 420 (453)
|||||||+||+.||+
T Consensus 315 ~gys~r~~d~~~~~~ 329 (330)
T 1gad_O 315 TGYSNKVLDLIAHIS 329 (330)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred chhhhHHHHHHHHhc
Confidence 999999999999985
No 20
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=100.00 E-value=4.1e-102 Score=788.29 Aligned_cols=332 Identities=42% Similarity=0.730 Sum_probs=307.7
Q ss_pred ceeeEEEEcCChhHHHHHHHHHh---CCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEE
Q 012940 85 AKLKVAINGFGRIGRNFLRCWHG---RKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKV 161 (453)
Q Consensus 85 m~ikVaInGfGrIGR~vlr~l~~---r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v 161 (453)
|++||||||||||||.++|+|.+ + |+++||+||+..++++++|||+|||+||+|.++++. +++.|.++|+.|.+
T Consensus 1 M~ikVgI~G~G~iGr~l~r~l~~~~~~--~~~eivai~~~~~~~~~~~ll~~ds~~g~~~~~v~~-~~~~l~v~g~~i~v 77 (339)
T 2x5j_O 1 MTVRVAINGFGRIGRNVVRALYESGRR--AEITVVAINELADAAGMAHLLKYDTSHGRFAWEVRQ-ERDQLFVGDDAIRV 77 (339)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTSGG--GTEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEE-ETTEEEETTEEEEE
T ss_pred CCeEEEEECcCHHHHHHHHHHHcCCCC--CCEEEEEEeCCCCHHHHHHHhcccccCCCCCceEEE-cCCeeEECCEEEEE
Confidence 56899999999999999999998 6 569999999998999999999999999999999986 68899999999999
Q ss_pred EeCCCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCC-eEEeccCccccCccCCeEEecCCc
Q 012940 162 VSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIP-TYVVGVNEKDYDHEVANIVSNASC 240 (453)
Q Consensus 162 ~~~~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISaps~d~dvP-tvV~gVN~~~~~~~~~~IVSnaSC 240 (453)
+++++|++++|++.++|+||||||.|.+++.+++|+++|+||||||+|+. .|+| ++|||||++.|++. ++|||||||
T Consensus 78 ~~~~dp~~l~~~~~~vDvV~e~tg~~~s~e~a~~~l~~GakkVVId~~ad-~d~p~~~V~gvN~~~~~~~-~~iIsnpsC 155 (339)
T 2x5j_O 78 LHERSLQSLPWRELGVDVVLDCTGVYGSREHGEAHIAAGAKKVLFSHPGS-NDLDATVVYGVNQDQLRAE-HRIVSNASC 155 (339)
T ss_dssp ECCSSGGGCCHHHHTCSEEEECSSSCCSHHHHHHHHHTTCSEEEESSCCC-TTSSEECCTTTSGGGCCTT-CCEEECCCH
T ss_pred EecCChHHCcccccCCCEEEECCCccccHHHHHHHHHcCCCEEEEecccc-CCCCceeecccCHHHhcCC-CCEEECCCc
Confidence 98899999999888999999999999999999999999999999999982 2688 99999999999864 589999999
Q ss_pred chhhhhhHHHHHhhhcCeeEEEEEeeeccccchhhhccccccchhhhhhhhccccCCCchhHHHHhhccccCCceeEEEE
Q 012940 241 TTNCLAPFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVMPQLKGKLNGIAL 320 (453)
Q Consensus 241 TTn~Lapvlk~L~d~fGI~~~~mTTiha~Tg~Q~llD~~~~d~rr~Raaa~NIIPt~tGaakav~kVlPeL~gKisgtav 320 (453)
|||||+|++||||++|||+++.|||+|++||+|+++|++|+|+||+|++++||||++||++++++++||+|+|||+++++
T Consensus 156 ttn~lap~lkpL~~~~gI~~~~~ttvha~Tg~q~~~d~~~~d~r~~r~a~~NiiP~~tg~a~ei~kvlp~l~gkl~~~a~ 235 (339)
T 2x5j_O 156 TTNCIIPVIKLLDDAYGIESGTVTTIHSAMHDQQVIDAYHPDLRRTRAASQSIIPVDTKLAAGITRFFPQFNDRFEAIAV 235 (339)
T ss_dssp HHHHHHHHHHHHHHHHCEEEEEEEEEECCC-----------CTTTTSCCCCCCEEECCCHHHHHHHHSGGGTTSEEEEEE
T ss_pred HHHHHHHHHHHHHHccCcceeeEEEEEeccccccccccccccccchhhHHhCcccccCChHHHHHHHHHHhcCcEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeeecceeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCcceeecccCeEeecCCCCCcceEEeCCCCceecCCeEEEEE
Q 012940 321 RVPTPNVSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVA 400 (453)
Q Consensus 321 RVPv~~gs~vdltv~lek~~vt~eeI~~al~~aa~~~lkgil~~~~~~~VS~Df~~~~~S~i~D~~~t~v~~~~~vKl~~ 400 (453)
||||++||+++++++++++ +|+|||+++|+++++|+|||||+|+|+|+||+||+|++||+|||+.+|++++++|+||++
T Consensus 236 rVP~~~g~~~~l~v~l~k~-~t~eei~~~lk~a~~~~l~gil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~ 314 (339)
T 2x5j_O 236 RVPTINVTAIDLSVTVKKP-VKANEVNLLLQKAAQGAFHGIVDYTELPLVSVDFNHDPHSAIVDGTQTRVSGAHLIKTLV 314 (339)
T ss_dssp ECSSCSCEEEEEEEEESSC-CCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCSSEEEEEEEEEEETTTEEEEEE
T ss_pred EecccCcEEEEEEEEECCC-CCHHHHHHHHHHHhhcCCCcEEcccCCcccccccCCCCCceEEEcccceeccCCEEEEEE
Confidence 9999999999999999998 899999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCchhhhHHHHHHHHHhc
Q 012940 401 WYDNEWGYSQRVVDLAHLVATK 422 (453)
Q Consensus 401 WYDNE~GYs~r~vdl~~~~~~~ 422 (453)
||||||||||||+||+.||+++
T Consensus 315 wydne~gys~r~~d~~~~~~~~ 336 (339)
T 2x5j_O 315 WCDNEWGFANRMLDTTLAMATV 336 (339)
T ss_dssp EECHHHHHHHHHHHHHHHHHCC
T ss_pred EeCCCcccHhHHHHHHHHHhhh
Confidence 9999999999999999999764
No 21
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=100.00 E-value=2.3e-101 Score=782.27 Aligned_cols=332 Identities=48% Similarity=0.807 Sum_probs=317.6
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCC-CChhhhhhhhccccceeecC-ceEEEecCCeEEECCeEEEEE
Q 012940 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS-GGVKNASHLLKYDSLLGTFK-ADVKIVDNETISVDGKLIKVV 162 (453)
Q Consensus 85 m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~-~~~~~~a~LlkyDS~~G~f~-~~v~~~~~~~l~v~Gk~I~v~ 162 (453)
|++||||||||||||.++|+|.++ ++++||+|||+ .++++++|||+|||+||+|+ +.++..+++.|.++|+.|.++
T Consensus 2 m~ikVgI~G~GrIGr~l~R~l~~~--p~vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~i~v~ 79 (337)
T 3e5r_O 2 GKIKIGINGFGRIGRLVARVALQS--EDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVF 79 (337)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTC--SSEEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEEEEEE
T ss_pred CceEEEEECcCHHHHHHHHHHhCC--CCeEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecCCeeEECCeEEEEE
Confidence 568999999999999999999976 56999999995 79999999999999999999 888742578899999999999
Q ss_pred eCCCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEeccCccccCccCCeEEecCCcch
Q 012940 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTT 242 (453)
Q Consensus 163 ~~~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISaps~d~dvPtvV~gVN~~~~~~~~~~IVSnaSCTT 242 (453)
++++|++++|++.++|+||||||.|.+++.+++|+++|+||||||+|++ |+|++|||||++.|++. ++|||||||||
T Consensus 80 ~~~dp~~l~w~~~~vDvV~eaTg~~~~~e~a~~~l~aGak~VVIs~pa~--d~p~~V~gvN~~~~~~~-~~iIsnpsCtt 156 (337)
T 3e5r_O 80 GIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSK--DAPMFVCGVNEDKYTSD-IDIVSNASCTT 156 (337)
T ss_dssp CCSCGGGCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCS--SSCBCCTTTTGGGCCTT-CCEEECCCHHH
T ss_pred ecCChHHccccccCCCEEEECCCchhhHHHHHHHHHcCCCEEEEecCCC--CCCEEEeccCHHHhCCC-CcEEECCChHH
Confidence 8899999999888999999999999999999999999999999999986 58999999999999864 78999999999
Q ss_pred hhhhhHHHHHhhhcCeeEEEEEeeeccccchhhhcccc-ccchhhhhhhhccccCCCchhHHHHhhccccCCceeEEEEE
Q 012940 243 NCLAPFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASH-RDLRRARAAALNIVPTSTGAAKAVSLVMPQLKGKLNGIALR 321 (453)
Q Consensus 243 n~Lapvlk~L~d~fGI~~~~mTTiha~Tg~Q~llD~~~-~d~rr~Raaa~NIIPt~tGaakav~kVlPeL~gKisgtavR 321 (453)
|||+|++||||++|||+++.|||+|++||+|+++|++| +|||++|++++||||+++|++++++++||+|+|||+++++|
T Consensus 157 ~~la~~lkpL~~~~gI~~~~~ttvha~Tg~q~~vd~~~~~~~~~~r~~~~NiiP~~tg~a~ei~kvlpel~gkl~~~a~r 236 (337)
T 3e5r_O 157 NCLAPLAKVIHDNFGIIEGLMTTVHAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFR 236 (337)
T ss_dssp HHHHHHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCTTCSGGGSBGGGSCEEEECCHHHHHHHHSGGGTTTEEEEEEE
T ss_pred HHHHHHHHHHHHhcCccccceeEEEeeccccccccccccccccccccHhhCccccCCCchHHHHHHHHHhCCcEEEEEEE
Confidence 99999999999999999999999999999999999998 69999999999999999999999999999999999999999
Q ss_pred eeecceeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCcceeecccCeEeecCCCCCcceEEeCCCCceecCCeEEEEEE
Q 012940 322 VPTPNVSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAW 401 (453)
Q Consensus 322 VPv~~gs~vdltv~lek~~vt~eeI~~al~~aa~~~lkgil~~~~~~~VS~Df~~~~~S~i~D~~~t~v~~~~~vKl~~W 401 (453)
|||++||+++++++++++ +|+|||+++|+++++|+|||||+|+|+|+||+||+|++||+|||+.+|++++++|+||++|
T Consensus 237 VP~~~g~~~~l~~~l~k~-~t~eei~~~~~~a~~~~l~gil~y~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~w 315 (337)
T 3e5r_O 237 VPTVDVSVVDLTVRIEKA-ASYDAIKSAIKSASEGKLKGIIGYVEEDLVSTDFVGDSRSSIFDAKAGIALNDNFVKLVAW 315 (337)
T ss_dssp ESCSSCEEEEEEEEESSC-CCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEETTTCEEEETTEEEEEEE
T ss_pred eccCCeEEEEEEEEECCC-ccHHHHHHHHHHHhhCCCCCcccCCCCCeeeeeecCCCCceEEecccCcEecCCEEEEEEE
Confidence 999999999999999998 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCchhhhHHHHHHHHHhc
Q 012940 402 YDNEWGYSQRVVDLAHLVATK 422 (453)
Q Consensus 402 YDNE~GYs~r~vdl~~~~~~~ 422 (453)
|||||||||||+||+.||+++
T Consensus 316 ydne~gys~r~~~~~~~~~~~ 336 (337)
T 3e5r_O 316 YDNEWGYSNRVIDLIRHMAKT 336 (337)
T ss_dssp ECTTHHHHHHHHHHHHHHHHC
T ss_pred eCCCcchHhHHHHHHHHHhcc
Confidence 999999999999999999764
No 22
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=100.00 E-value=6.9e-101 Score=777.83 Aligned_cols=331 Identities=47% Similarity=0.793 Sum_probs=317.6
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCC-CChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEe
Q 012940 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS-GGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (453)
Q Consensus 85 m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~-~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~ 163 (453)
|++||||||||||||.++|+|.++ ++++||+|||+ .++++++||++|||+||+|++.++. +++.|.++|+.|.+++
T Consensus 2 M~ikVgI~G~G~iGr~~~R~l~~~--~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~-~~~~l~v~g~~i~v~~ 78 (335)
T 1u8f_O 2 GKVKVGVNGFGRIGRLVTRAAFNS--GKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKA-ENGKLVINGNPITIFQ 78 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHH--CSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEE-ETTEEEETTEEEEEEC
T ss_pred CceEEEEEccCHHHHHHHHHHHcC--CCcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEE-cCCeEEECCeEEEEEe
Confidence 568999999999999999999886 56999999995 8999999999999999999999986 6889999999999999
Q ss_pred CCCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEeccCccccCccCCeEEecCCcchh
Q 012940 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTN 243 (453)
Q Consensus 164 ~~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISaps~d~dvPtvV~gVN~~~~~~~~~~IVSnaSCTTn 243 (453)
+++|++++|++.++|+||||||.|.+++.+++|+++|+|+|++|+|.+ ++|++|||||++.|++. ++||||||||||
T Consensus 79 ~~d~~~l~~~~~~vDvV~eatg~~~~~e~a~~~l~aGak~V~iSap~~--~~p~~V~gvN~~~~~~~-~~iIsnpsCtt~ 155 (335)
T 1u8f_O 79 ERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSA--DAPMFVMGVNHEKYDNS-LKIISNASCTTN 155 (335)
T ss_dssp CSSGGGCCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCCS--SSCBCCTTTTGGGCCTT-CSEEECCCHHHH
T ss_pred cCCHHHCccccCCCCEEEECCCchhhHHHHHHHHhCCCeEEEeccCCC--CCCeEEeccCHHHhCCC-CCEEECCChHHH
Confidence 899999999888999999999999999999999999999999999965 58999999999999864 689999999999
Q ss_pred hhhhHHHHHhhhcCeeEEEEEeeeccccchhhhcccc-ccchhhhhhhhccccCCCchhHHHHhhccccCCceeEEEEEe
Q 012940 244 CLAPFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASH-RDLRRARAAALNIVPTSTGAAKAVSLVMPQLKGKLNGIALRV 322 (453)
Q Consensus 244 ~Lapvlk~L~d~fGI~~~~mTTiha~Tg~Q~llD~~~-~d~rr~Raaa~NIIPt~tGaakav~kVlPeL~gKisgtavRV 322 (453)
||+|++||||++|||+++.|||+|++||+|+++|++| +|+||+|++++||||+++|++++++|+||+|+||++++++||
T Consensus 156 ~l~~~lkpL~~~~gI~~~~~tt~~a~Tg~q~~vd~~~~~~~~~~r~~~~NiiP~~tg~a~ei~kvlpel~gkl~~~a~rV 235 (335)
T 1u8f_O 156 CLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGALQNIIPASTGAAKAVGKVIPELNGKLTGMAFRV 235 (335)
T ss_dssp HHHHHHHHHHHHHCEEEEEEEEEEECCTTSBSSSCCCTTCGGGGSBTTTCCEEEECCTTTTHHHHSGGGTTSEEEEEEEE
T ss_pred HHHHHHHHHHHhCCcceeEEEEEeccccCccccccccccccccchhhhcCceeccCChhHHHHHHHHHhCCcEEEEEEEe
Confidence 9999999999999999999999999999999999998 899999999999999999999999999999999999999999
Q ss_pred eecceeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCcceeecccCeEeecCCCCCcceEEeCCCCceecCCeEEEEEEe
Q 012940 323 PTPNVSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWY 402 (453)
Q Consensus 323 Pv~~gs~vdltv~lek~~vt~eeI~~al~~aa~~~lkgil~~~~~~~VS~Df~~~~~S~i~D~~~t~v~~~~~vKl~~WY 402 (453)
||++||+++++++++++ +|+|||+++|+++++|+|||||+|+|+|+||+||+|++||+|||+.+|++++++++||++||
T Consensus 236 P~~~g~~~~l~~~l~~~-~t~eei~~~~~~a~~~~~~~il~~~~~~~vs~d~~~~~~s~~~d~~~~~~~~~~~~k~~~wy 314 (335)
T 1u8f_O 236 PTANVSVVDLTCRLEKP-AKYDDIKKVVKQASEGPLKGILGYTEHQVVSSDFNSDTHSSTFDAGAGIALNDHFVKLISWY 314 (335)
T ss_dssp SCSSCEEEEEEEEESSC-CCHHHHHHHHHHHHHTTTTTTEEEECSCCCGGGGTTCCCSEEEETTTCEEEETTEEEEEEEE
T ss_pred ccCCEEEEEEEEEECCC-CCHHHHHHHHHHHhhCccCcEEcccCCCcceeeecCCCCceEEeCCCCEEecCCEEEEEEEE
Confidence 99999999999999998 89999999999999999999999999999999999999999999999999989999999999
Q ss_pred cCCCchhhhHHHHHHHHHhc
Q 012940 403 DNEWGYSQRVVDLAHLVATK 422 (453)
Q Consensus 403 DNE~GYs~r~vdl~~~~~~~ 422 (453)
||||||||||+||+.||+++
T Consensus 315 dne~gy~~r~~~~~~~~~~~ 334 (335)
T 1u8f_O 315 DNEFGYSNRVVDLMAHMASK 334 (335)
T ss_dssp CTTHHHHHHHHHHHHHHHHT
T ss_pred cCcchhHhHHHHHHHHHhcc
Confidence 99999999999999999764
No 23
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=1.1e-59 Score=477.91 Aligned_cols=242 Identities=20% Similarity=0.275 Sum_probs=215.9
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccc--cceeec--CceE-EEecCCeEEECCeEE
Q 012940 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYD--SLLGTF--KADV-KIVDNETISVDGKLI 159 (453)
Q Consensus 85 m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyD--S~~G~f--~~~v-~~~~~~~l~v~Gk~I 159 (453)
|++||||||||||||.++|+|.++ ++++||+|||. ++++++||++|| ++||+| ++++ +. .++.|.++|
T Consensus 1 MmikVgI~G~G~IGr~v~r~l~~~--~~~evvaV~d~-~~~~~~~l~~~dg~s~~g~~~~~~~v~~~-~~~~l~v~~--- 73 (343)
T 2yyy_A 1 MPAKVLINGYGSIGKRVADAVSMQ--DDMEVIGVTKT-KPDFEARLAVEKGYKLFVAIPDNERVKLF-EDAGIPVEG--- 73 (343)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHS--SSEEEEEEEES-SCSHHHHHHHHTTCCEEESSCCHHHHHHH-HHTTCCCCC---
T ss_pred CceEEEEECCCHHHHHHHHHHHhC--CCceEEEEecC-CHHHHHHHHHhcCCccccccCCCceeecc-cCCeEEECC---
Confidence 568999999999999999999887 46999999997 599999999999 999999 6665 43 455666665
Q ss_pred EEEeCCCCCCCCccccCccEEEcCCCCCCChhhHH-HHHHcCCCEEEEeCCCCCCCCC-eEEeccCccccCccCCeEEec
Q 012940 160 KVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAG-KHIQAGAKKVIITAPAKGADIP-TYVVGVNEKDYDHEVANIVSN 237 (453)
Q Consensus 160 ~v~~~~dp~~l~W~~~gvDiVie~TG~f~s~e~a~-~hl~aGAkkVIISaps~d~dvP-tvV~gVN~~~~~~~~~~IVSn 237 (453)
++..+.| ++|+||||||.+.+.+.++ +|+++| ++||+|+|++++++| +||||||++.|+. ++||||
T Consensus 74 ------~~~~~~~---~vDiV~eatg~~~s~~~a~~~~l~aG-~~VI~sap~~~d~vp~~vV~gvN~~~~~~--~~iIsn 141 (343)
T 2yyy_A 74 ------TILDIIE---DADIVVDGAPKKIGKQNLENIYKPHK-VKAILQGGEKAKDVEDNFNALWSYNRCYG--KDYVRV 141 (343)
T ss_dssp ------BGGGTGG---GCSEEEECCCTTHHHHHHHHTTTTTT-CEEEECTTSCGGGSSEEECTTTTHHHHTT--CSEEEE
T ss_pred ------chHHhcc---CCCEEEECCCccccHHHHHHHHHHCC-CEEEECCCccccCCCceEEcccCHHHhcc--CCEEec
Confidence 3445556 7999999999999999996 999999 569999998643389 9999999999974 589999
Q ss_pred CCcchhhhhhHHHHHhhhcCeeEEEEEeeeccccchhhhccccccchhhhhhhhccccC----CCchhHHHHhhccccCC
Q 012940 238 ASCTTNCLAPFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPT----STGAAKAVSLVMPQLKG 313 (453)
Q Consensus 238 aSCTTn~Lapvlk~L~d~fGI~~~~mTTiha~Tg~Q~llD~~~~d~rr~Raaa~NIIPt----~tGaakav~kVlPeL~g 313 (453)
||||||||+|+||+||++|||+++.|||||++||. + +++|++++||||+ ++|++|+++||||+|+|
T Consensus 142 ~sCtT~~lap~lk~L~~~fgI~~~~vtT~~a~sg~-------~---~~~r~~~~NiiP~~i~~~tg~~k~~~kilp~l~g 211 (343)
T 2yyy_A 142 VSCNTTGLCRILYAINSIADIKKARIVLVRRAADP-------N---DDKTGPVNAITPNPVTVPSHHGPDVVSVVPEFEG 211 (343)
T ss_dssp CCHHHHHHHHHHHHHHTTSEEEEEEEEEEEESSCT-------T---CSSCCCSSCCEESSSSSSCTHHHHHHHHCGGGTT
T ss_pred cchhhHHHHHHHHHHHHHcCceEEEEEeeeeccCc-------C---cchhhHHhcccCCCCCCCCcchHHHHHhhhcccc
Confidence 99999999999999999999999999999999982 2 5678999999999 99999999999999999
Q ss_pred ceeEEEEEeeecceeEEEEEEEEccCCCCHHHHHHHHHHcccC
Q 012940 314 KLNGIALRVPTPNVSVVDLVVNVEKKGITAEDVNAAFRKAAEG 356 (453)
Q Consensus 314 KisgtavRVPv~~gs~vdltv~lek~~vt~eeI~~al~~aa~~ 356 (453)
|++++|+||||++||+++|+++|+++ +|+|||+++|++++..
T Consensus 212 kl~~~avRVPv~~gh~~~l~v~l~~~-~t~eei~~~l~~a~~v 253 (343)
T 2yyy_A 212 KILTSAVIVPTTLMHMHTLMVEVDGD-VSRDDILEAIKKTPRI 253 (343)
T ss_dssp SEEEEEEEESCSSCEEEEEEEEEESC-CCHHHHHHHHHHSTTE
T ss_pred ceeeEEEEecccceEEEEEEEEECCC-CCHHHHHHHHHhCCCC
Confidence 99999999999999999999999998 8999999999999753
No 24
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=1.5e-49 Score=402.61 Aligned_cols=304 Identities=16% Similarity=0.162 Sum_probs=242.4
Q ss_pred ceeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEe
Q 012940 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (453)
Q Consensus 85 m~ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~ 163 (453)
|++||+|+| ||+|||.++|.|.++..+.++++++++.. + .++.+.++|+.+.+..
T Consensus 5 m~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~------------~------------~g~~~~~~g~~i~~~~ 60 (340)
T 2hjs_A 5 QPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAE------------S------------AGQRMGFAESSLRVGD 60 (340)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTT------------T------------TTCEEEETTEEEECEE
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCC------------C------------CCCccccCCcceEEec
Confidence 458999999 99999999999997766789999998631 0 1334457777777643
Q ss_pred CCCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEeccCccccCccCC-eEEecCCcch
Q 012940 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVA-NIVSNASCTT 242 (453)
Q Consensus 164 ~~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISaps~d~dvPtvV~gVN~~~~~~~~~-~IVSnaSCTT 242 (453)
.+++. |. ++|+||+|+|.+.+++.++.|+++|+|+|.+|++..++++|++|||||++.|+..++ +|||||||+|
T Consensus 61 -~~~~~--~~--~~DvV~~a~g~~~s~~~a~~~~~aG~kvId~Sa~~rd~~~~~~vpevN~~~i~~~~~~~iIanp~C~t 135 (340)
T 2hjs_A 61 -VDSFD--FS--SVGLAFFAAAAEVSRAHAERARAAGCSVIDLSGALEPSVAPPVMVSVNAERLASQAAPFLLSSPCAVA 135 (340)
T ss_dssp -GGGCC--GG--GCSEEEECSCHHHHHHHHHHHHHTTCEEEETTCTTTTTTSCBCCHHHHGGGGGGSCSSCEEECCCHHH
T ss_pred -CCHHH--hc--CCCEEEEcCCcHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCeEEcCcCHHHHhcCcCCCEEEcCCHHH
Confidence 34543 75 899999999999999999999999998777788765667899999999999975322 7999999999
Q ss_pred hhhhhHHHHHhhhcCeeEEEEEeeeccccchh-hhcccc---ccchh---------hhhhhhccccCCC-----c-----
Q 012940 243 NCLAPFVKVMDEELGIVKGAMTTTHSYTGDQR-LLDASH---RDLRR---------ARAAALNIVPTST-----G----- 299 (453)
Q Consensus 243 n~Lapvlk~L~d~fGI~~~~mTTiha~Tg~Q~-llD~~~---~d~rr---------~Raaa~NIIPt~t-----G----- 299 (453)
|||+|+|+||+++|||+++.|||+|+|||+|+ .+|.++ +|||+ +|++++||||+++ |
T Consensus 136 t~~~~~l~pL~~~~~i~~~~v~t~~~~SgaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~niip~~~~~~~~gh~~Ee 215 (340)
T 2hjs_A 136 AELCEVLAPLLATLDCRQLNLTACLSVSSLGREGVKELARQTAELLNARPLEPRLFDRQIAFNLLAQVGAVDAEGHSAIE 215 (340)
T ss_dssp HHHHHHHHHHTTTCCEEEEEEEEEECGGGGCHHHHHHHHHHHHHHHTTCCCCCSSSSSCCTTCCBSSSSCBCTTSCBHHH
T ss_pred HHHHHHHHHHHHhcCcceEEEEEecccCCCCccccHhHHHHHHHHhccCCccccccchhhccCeeccccCcccCCccHHH
Confidence 99999999999999999999999999999996 578766 56776 4789999999987 7
Q ss_pred --hhHHHHhhccccCCceeEEEEEeeecceeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCcceeecccCeEeecCCCC
Q 012940 300 --AAKAVSLVMPQLKGKLNGIALRVPTPNVSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCS 377 (453)
Q Consensus 300 --aakav~kVlPeL~gKisgtavRVPv~~gs~vdltv~lek~~vt~eeI~~al~~aa~~~lkgil~~~~~~~VS~Df~~~ 377 (453)
..++++||+|++++|++++|+||||++||+++++++++++ +|+|||+++|++++ +--++...+-|-...|..|.
T Consensus 216 ~k~~~~~~kil~~~~~~v~~~~~rVP~~~g~~~~~~~~l~~~-~t~eei~~~~~~~~---~V~v~~~~~~p~~~~~v~g~ 291 (340)
T 2hjs_A 216 RRIFAEVQALLGERIGPLNVTCIQAPVFFGDSLSVTLQCAEP-VDLAAVTRVLDATK---GIEWVGEGDYPTVVGDALGQ 291 (340)
T ss_dssp HHHHHHHHHHTGGGBCCEEEEEEECSCSSCEEEEEEEEESSC-CCHHHHHHHHHHST---TEEECCTTCCCCCCCCCTTS
T ss_pred HHHHHHHHHHhCCCCCcEEEEeEEcCcCceEEEEEEEEECCC-CCHHHHHHHHhcCC---CcEEeCCCCCCccHHHcCCC
Confidence 4455688999999999999999999999999999999998 89999999999754 21222211112111155666
Q ss_pred CcceEEeCCCCceecCCeEEEEEEecC-CCchhhhHHHHHHHHHhc
Q 012940 378 DVSSTIDSSLTMVMGDDMVKVVAWYDN-EWGYSQRVVDLAHLVATK 422 (453)
Q Consensus 378 ~~S~i~D~~~t~v~~~~~vKl~~WYDN-E~GYs~r~vdl~~~~~~~ 422 (453)
.+..|--...... .++.+.+++|.|| -||.|-..|-.+++|.++
T Consensus 292 ~~~~vgr~r~~~~-~~~~l~~~~~~DNl~kGAA~~avq~~~l~~~~ 336 (340)
T 2hjs_A 292 DETYVGRVRAGQA-DPCQVNLWIVSDNVRKGAALNAVLLGELLIKH 336 (340)
T ss_dssp SCEEEEEEEECSS-CTTEEEEEEEECCCCCCCHHHHHHHHHHHHHH
T ss_pred CEEEEEEEEecCC-CCCEEEEEEEechHHHHHHHHHHHHHHHHHHh
Confidence 6555433222221 3467999999999 999999999999998765
No 25
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=100.00 E-value=5.3e-49 Score=397.44 Aligned_cols=297 Identities=18% Similarity=0.212 Sum_probs=232.5
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeCC
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~~ 165 (453)
||||||| ||+|||.++|+|+++..+.++++ ++. | .+ ..++.+.++|+.+.++..
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~-------------~~~--s--------~~-~~g~~l~~~g~~i~v~~~- 55 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNFPLSELR-------------LYA--S--------PR-SAGVRLAFRGEEIPVEPL- 55 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCCE-------------EEE--C--------GG-GSSCEEEETTEEEEEEEC-
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEE-------------Eee--c--------cc-cCCCEEEEcCceEEEEeC-
Confidence 5899999 99999999999997654434432 221 1 01 146788899999999775
Q ss_pred CCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC-CCCCCCCeEEeccCccccCccCCeEEecCCcchhh
Q 012940 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP-AKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNC 244 (453)
Q Consensus 166 dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap-s~d~dvPtvV~gVN~~~~~~~~~~IVSnaSCTTn~ 244 (453)
+++ +| ++|+||+|+|.|.++++++.|+++|++.|..|++ ++++++|++|||||++.|+.. ++|||||||+|||
T Consensus 56 ~~~--~~---~~DvV~~a~g~~~s~~~a~~~~~~G~~vId~s~~~R~~~~~~~~vpevN~~~i~~~-~~iIanp~C~tt~ 129 (331)
T 2yv3_A 56 PEG--PL---PVDLVLASAGGGISRAKALVWAEGGALVVDNSSAWRYEPWVPLVVPEVNREKIFQH-RGIIANPNCTTAI 129 (331)
T ss_dssp CSS--CC---CCSEEEECSHHHHHHHHHHHHHHTTCEEEECSSSSTTCTTSCBCCTTSCGGGGGGC-SSEEECCCHHHHH
T ss_pred Chh--hc---CCCEEEECCCccchHHHHHHHHHCCCEEEECCCccccCCCCCEEEcCcCHHHhcCC-CCEEECCCHHHHH
Confidence 555 58 7999999999999999999999999943333433 245578999999999999863 5799999999999
Q ss_pred hhhHHHHHhhhcCeeEEEEEeeeccccc------------hhhhcccc-ccchhhhhhhhccccCC--------CchhHH
Q 012940 245 LAPFVKVMDEELGIVKGAMTTTHSYTGD------------QRLLDASH-RDLRRARAAALNIVPTS--------TGAAKA 303 (453)
Q Consensus 245 Lapvlk~L~d~fGI~~~~mTTiha~Tg~------------Q~llD~~~-~d~rr~Raaa~NIIPt~--------tGaaka 303 (453)
|+|+|+||+++|||+++.|||+|+|||+ |+++|+++ +++|++|++++||||++ |++++.
T Consensus 130 ~~~~l~pL~~~~~I~~~~vtt~~~~SgaG~~~~~~l~~q~~~~~~~~~~~~~~~~~~~a~niiP~~~~~~~~~ht~e~~~ 209 (331)
T 2yv3_A 130 LAMALWPLHRAFQAKRVIVATYQAASGAGAKAMEELLTETHRFLHGEAPKAEAFAHPLPFNVIPHIDAFQENGYTREEMK 209 (331)
T ss_dssp HHHHHHHHHHHHCEEEEEEEEEBCGGGGCHHHHHHHHHHHHHHHTSSCCCCCSSSSCCTTCCBSCCSCBCTTSCBHHHHH
T ss_pred HHHHHHHHHHhCCceEEEEEEEeecccCCcchhHHHHHHHHhhhcCccccccccchhhhcCcccccCccccCCCcHHHHH
Confidence 9999999999999999999999999999 88888764 78999999999999998 777666
Q ss_pred H----Hhhc--cccCCceeEEEEEeeecceeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCcceeeccc--CeEeecCC
Q 012940 304 V----SLVM--PQLKGKLNGIALRVPTPNVSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILAVCDV--PLVSVDFR 375 (453)
Q Consensus 304 v----~kVl--PeL~gKisgtavRVPv~~gs~vdltv~lek~~vt~eeI~~al~~aa~~~lkgil~~~~~--~~VS~Df~ 375 (453)
+ +|+| |+| +++++|+|||+++||+++++++++++ +++|||+++|++++- --++.-.++ ..-..+..
T Consensus 210 i~~e~~kil~~~~l--~v~~~~~rVP~~~g~~~~~~~~l~~~-~t~eei~~~~~~~~~---v~v~~~~~~~~~p~~~~~~ 283 (331)
T 2yv3_A 210 VVWETHKIFGDDTI--RISATAVRVPTLRAHAEAVSVEFARP-VTPEAAREVLKEAPG---VEVVDEPEAKRYPMPLTAS 283 (331)
T ss_dssp HHHHHHHHTTCTTC--EEEEECCBCSCSSEEEEEEEEEESSC-CCHHHHHHHHTTSTT---CCBCCBTTTTBCCCHHHHT
T ss_pred HHHHHHHHhCCCCc--eEEEEEEEeccCceEEEEEEEEECCC-CCHHHHHHHHHcCCC---eEEEeCCCcCCCCChhhcc
Confidence 7 8998 888 49999999999999999999999998 899999999998552 112111000 00012555
Q ss_pred CCCcceEEeCCCCceecCCeEEEEEEecCC-CchhhhHHHHHHHHHh
Q 012940 376 CSDVSSTIDSSLTMVMGDDMVKVVAWYDNE-WGYSQRVVDLAHLVAT 421 (453)
Q Consensus 376 ~~~~S~i~D~~~t~v~~~~~vKl~~WYDNE-~GYs~r~vdl~~~~~~ 421 (453)
|..+..|--...... .++.+.+++|.||- +|.|-+-|-.+++|.+
T Consensus 284 g~~~~~igr~~~d~~-~~~~l~~~~~~DNl~kGAAg~AVq~~nl~~~ 329 (331)
T 2yv3_A 284 GKWDVEVGRIRKSLA-FENGLDFFVVGDQLLKGAALNAVQIAEEWLK 329 (331)
T ss_dssp TCSSEEEEEEEECSS-STTEEEEEEEEETTHHHHTTHHHHHHHHHC-
T ss_pred CCceEEEEEEEECCC-CCCEEEEEEEechHHHHHHHHHHHHHHHHhh
Confidence 665554431111110 24578999999999 9999999998888754
No 26
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=100.00 E-value=1.2e-48 Score=395.49 Aligned_cols=302 Identities=21% Similarity=0.228 Sum_probs=221.2
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeC
Q 012940 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (453)
Q Consensus 86 ~ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~ 164 (453)
++||||+| ||+|||.++|+|.+++++++++++|++..+ .|..+.++|+.+.+. +
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~------------------------~G~~~~~~~~~i~~~-~ 57 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERS------------------------EGKTYRFNGKTVRVQ-N 57 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTT------------------------TTCEEEETTEEEEEE-E
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCC------------------------CCCceeecCceeEEe-c
Confidence 47999999 999999999999988667799999986311 234455778777773 3
Q ss_pred CCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCC-CCCCCCeEEeccCccccCccC-CeEEecCCcch
Q 012940 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA-KGADIPTYVVGVNEKDYDHEV-ANIVSNASCTT 242 (453)
Q Consensus 165 ~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISaps-~d~dvPtvV~gVN~~~~~~~~-~~IVSnaSCTT 242 (453)
.+++ +|. ++|+||+|+|.+.+++.++.|+++|++.|.+|++. +++++|++|||||++.|+..+ .+|||||||+|
T Consensus 58 ~~~~--~~~--~vDvVf~a~g~~~s~~~a~~~~~~G~~vId~s~~~R~~~~~~~~vpevN~~~i~~~~~~~iIanp~C~t 133 (336)
T 2r00_A 58 VEEF--DWS--QVHIALFSAGGELSAKWAPIAAEAGVVVIDNTSHFRYDYDIPLVVPEVNPEAIAEFRNRNIIANPNCST 133 (336)
T ss_dssp GGGC--CGG--GCSEEEECSCHHHHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGGGGGTTEEECCCHHH
T ss_pred CChH--Hhc--CCCEEEECCCchHHHHHHHHHHHcCCEEEEcCCccccCCCCCeEeccCCHHHhccccCCcEEECCChHH
Confidence 4443 684 89999999999999999999999999544445442 456789999999999997521 56999999999
Q ss_pred hhhhhHHHHHhhhcCeeEEEEEeeeccccchh-hhccccc------------cchhhhhhhhccccCCC-----ch----
Q 012940 243 NCLAPFVKVMDEELGIVKGAMTTTHSYTGDQR-LLDASHR------------DLRRARAAALNIVPTST-----GA---- 300 (453)
Q Consensus 243 n~Lapvlk~L~d~fGI~~~~mTTiha~Tg~Q~-llD~~~~------------d~rr~Raaa~NIIPt~t-----Ga---- 300 (453)
|||+|+|+||+++|||+++.|||+|+|||+|+ ++|+++. +++++|++++||||+++ |+
T Consensus 134 t~~~~~l~pL~~~~~i~~~~vtt~~~~SgaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~niip~~~~~~~~gh~~Ee 213 (336)
T 2r00_A 134 IQMLVALKPIYDAVGIERINVTTYQSVSGAGKAGIDELAGQTAKLLNGYPAETNTFSQQIAFNCIPQIDQFMDNGYTKEE 213 (336)
T ss_dssp HHHHHHHHHHHHHHCEEEEEEEEEEESSSCCTTSCC-----------------------------CCBCTTTCSSCBHHH
T ss_pred HHHHHHHHHHHHhCCccEEEEEEEEecccCChhhhHHHHHHHHHhhcCCCCCccccchhhhcCcccccCCcccCCccHHH
Confidence 99999999999999999999999999999975 8887764 67899999999999974 74
Q ss_pred ---hHHHHhhccccCCceeEEEEEeeecceeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCcceeecccCeEeecCCCC
Q 012940 301 ---AKAVSLVMPQLKGKLNGIALRVPTPNVSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCS 377 (453)
Q Consensus 301 ---akav~kVlPeL~gKisgtavRVPv~~gs~vdltv~lek~~vt~eeI~~al~~aa~~~lkgil~~~~~~~VS~Df~~~ 377 (453)
.++++||||++++|++++|+||||++||+++++++++++ +++|||+++|++++ +--++...+-|-.-.+..|.
T Consensus 214 ~k~~~e~~kil~~~~~~v~~t~~rVP~~~g~~~~~~~~l~~~-~t~~ei~~~~~~~~---~v~v~~~~~~p~~~~~v~g~ 289 (336)
T 2r00_A 214 MKMVWETQKIFNDPSIMVNPTCVRVPVFYGHAEAVHVETRAP-IDAEQVMDMLEQTD---GIELFRGADFPTQVRDAGGK 289 (336)
T ss_dssp HHHHHHHHHHTTCTTCEEEEEEEEESSCBSEEEEEEEEESSC-CCHHHHHHHHHHST---TEEECCCCSSGGGCCCCCSS
T ss_pred HHHHHHHHHHhCCCCCcEEEEeEEeccCcEEEEEEEEEeCCC-CCHHHHHHHHHhCC---CeEEECCCCCCcCHHHhCCC
Confidence 456678899999999999999999999999999999998 89999999999843 11122100112111144555
Q ss_pred CcceEEeCCCCceecCCeEEEEEEecCC-CchhhhHHHHHHHHHh
Q 012940 378 DVSSTIDSSLTMVMGDDMVKVVAWYDNE-WGYSQRVVDLAHLVAT 421 (453)
Q Consensus 378 ~~S~i~D~~~t~v~~~~~vKl~~WYDNE-~GYs~r~vdl~~~~~~ 421 (453)
.+..|--...... .++.+.++++.||- +|-|-+-|-.+++|.+
T Consensus 290 ~~~~vgr~~~d~~-~~~~l~~~~~~DNl~kGAAg~Avq~~nl~~~ 333 (336)
T 2r00_A 290 DHVLVGRVRNDIS-HHSGINLWVVADNVRKGAATNAVQIAELLVR 333 (336)
T ss_dssp SCEEEEEEEEETT-EEEEEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEEecCC-CCCEEEEEEEehhHHHhHHHHHHHHHHHHHh
Confidence 5444321111000 23468899999998 8999998888888765
No 27
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=1.6e-48 Score=394.79 Aligned_cols=274 Identities=18% Similarity=0.246 Sum_probs=218.9
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccc--cceeecCceE-EEecCCeEEECCeEEEEE
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYD--SLLGTFKADV-KIVDNETISVDGKLIKVV 162 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyD--S~~G~f~~~v-~~~~~~~l~v~Gk~I~v~ 162 (453)
++||||||+|+|||.++|+|.++ +++++++|++. +++..+++++|| ++||.|++.+ .. .+..+.+++.
T Consensus 1 mikVgIiGaG~iG~~l~r~L~~~--~~~elvav~d~-~~~~~~~~~~~~g~~~~~~~~~~v~~~-~~~~l~v~~~----- 71 (337)
T 1cf2_P 1 MKAVAINGYGTVGKRVADAIAQQ--DDMKVIGVSKT-RPDFEARMALKKGYDLYVAIPERVKLF-EKAGIEVAGT----- 71 (337)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTS--SSEEEEEEEES-SCSHHHHHHHHTTCCEEESSGGGHHHH-HHTTCCCCEE-----
T ss_pred CeEEEEEeECHHHHHHHHHHHcC--CCcEEEEEEcC-ChhHHHHhcCCcchhhccccccceeee-cCCceEEcCC-----
Confidence 37999999999999999999876 56999999997 567888999888 8999988765 32 2334545431
Q ss_pred eCCCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCC--CeEEeccCccccCccCCeEEecCCc
Q 012940 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADI--PTYVVGVNEKDYDHEVANIVSNASC 240 (453)
Q Consensus 163 ~~~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISaps~d~dv--PtvV~gVN~~~~~~~~~~IVSnaSC 240 (453)
++++.| ++|+||+|||.+.+++.+++|+++|+ +||+++|.++ |+ |++|||||++.|+. .+|||||||
T Consensus 72 ----~~~~~~---~vDvV~~atp~~~~~~~a~~~l~aG~-~VId~sp~~~-d~~~~~~V~gvN~e~~~~--~~iIanp~C 140 (337)
T 1cf2_P 72 ----VDDMLD---EADIVIDCTPEGIGAKNLKMYKEKGI-KAIFQGGEKH-EDIGLSFNSLSNYEESYG--KDYTRVVSC 140 (337)
T ss_dssp ----HHHHHH---TCSEEEECCSTTHHHHHHHHHHHHTC-CEEECTTSCH-HHHSCEECHHHHGGGGTT--CSEEEECCH
T ss_pred ----HHHHhc---CCCEEEECCCchhhHHHHHHHHHcCC-EEEEecCCCC-ccCCCeEEeeeCHHHhcC--CCEEEcCCc
Confidence 222223 79999999999999999999999996 4888888732 44 99999999999985 579999999
Q ss_pred chhhhhhHHHHHhhhcCeeEEEEEeeeccccchhhhccccccchhhhhhhhccccC----CCchhHHHHhhccccCCcee
Q 012940 241 TTNCLAPFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPT----STGAAKAVSLVMPQLKGKLN 316 (453)
Q Consensus 241 TTn~Lapvlk~L~d~fGI~~~~mTTiha~Tg~Q~llD~~~~d~rr~Raaa~NIIPt----~tGaakav~kVlPeL~gKis 316 (453)
+||||+|+|+||+++|||+++.|||||++|+ + .+++|++++||+|+ .++.+++++|+| +| +|+
T Consensus 141 ~tt~l~~~l~pL~~~~gI~~~~vtt~~a~s~-------p---~~~~~~~~~NiiP~~i~~~~~~~~ei~kil-~l--~v~ 207 (337)
T 1cf2_P 141 NTTGLCRTLKPLHDSFGIKKVRAVIVRRGAD-------P---AQVSKGPINAIIPNPPKLPSHHGPDVKTVL-DI--NID 207 (337)
T ss_dssp HHHHHHHHHHHHHHHHCEEEEEEEEEEESSC-------T---TCTTCCCSSCCEESSSSSSCTHHHHHHTTS-CC--CEE
T ss_pred HHHHHHHHHHHHHHhcCcceeEEEEEEEeec-------C---CccccchhcCEEeccCCCCCcchHHHHhhh-ee--EEE
Confidence 9999999999999999999999999999987 2 24567899999999 688899999999 88 599
Q ss_pred EEEEEeeecceeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCcceeecccCeEeecCCCCCcceEEeCCC--CceecCC
Q 012940 317 GIALRVPTPNVSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILAVCDVPLVSVDFRCSDVSSTIDSSL--TMVMGDD 394 (453)
Q Consensus 317 gtavRVPv~~gs~vdltv~lek~~vt~eeI~~al~~aa~~~lkgil~~~~~~~VS~Df~~~~~S~i~D~~~--t~v~~~~ 394 (453)
++|+||||++||+++++++|+++ +|+|||+++|++++... ++..++..+..+.+|+... +...+ +
T Consensus 208 ~t~~rVPv~~g~~~~~~v~l~~~-~t~eei~~~~~~~~~v~-----------v~~~~~~~~~~~~~~~~~~~~gr~r~-d 274 (337)
T 1cf2_P 208 TMAVIVPTTLMHQHNVMVEVEET-PTVDDIIDVFEDTPRVI-----------LISAEDGLTSTAEIMEYAKELGRSRN-D 274 (337)
T ss_dssp EEEEEESCCSCEEEEEEEEESSC-CCHHHHHHHHHHSTTEE-----------EECTTTTCCSHHHHHHHHHHHTCGGG-C
T ss_pred EEEEEcCccCeEEEEEEEEECCC-CCHHHHHHHHHhCCCcE-----------EeccccCCCCCcchhhhhhhcCCCcc-C
Confidence 99999999999999999999998 89999999999986321 1122222222333332221 22333 4
Q ss_pred eEEEEEEecCC
Q 012940 395 MVKVVAWYDNE 405 (453)
Q Consensus 395 ~vKl~~WYDNE 405 (453)
+.++..||||=
T Consensus 275 ~~~~~~w~~~~ 285 (337)
T 1cf2_P 275 LFEIPVWRESI 285 (337)
T ss_dssp CCSEEEEGGGC
T ss_pred chhheeehhee
Confidence 88899999963
No 28
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=3.8e-46 Score=377.77 Aligned_cols=228 Identities=16% Similarity=0.215 Sum_probs=189.7
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeCC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~~ 165 (453)
++||||||+|+|||.++|+|.++ ++++|++|+|. +++..+++++++- +.++..+
T Consensus 1 ~ikVgIiGaG~iG~~~~r~L~~~--p~~elvav~d~-~~~~~~~~a~~~g-----------------------~~~~~~~ 54 (340)
T 1b7g_O 1 MVNVAVNGYGTIGKRVADAIIKQ--PDMKLVGVAKT-SPNYEAFIAHRRG-----------------------IRIYVPQ 54 (340)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTC--TTEEEEEEECS-SCSHHHHHHHHTT-----------------------CCEECCG
T ss_pred CeEEEEEecCHHHHHHHHHHHcC--CCCEEEEEEcC-ChHHHHHHHHhcC-----------------------cceecCc
Confidence 37999999999999999999876 56999999997 5677777776431 1111112
Q ss_pred CCCCCCccc-------------cCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEeccCccccCccCC
Q 012940 166 DPLQLPWAE-------------LGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVA 232 (453)
Q Consensus 166 dp~~l~W~~-------------~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISaps~d~dvPtvV~gVN~~~~~~~~~ 232 (453)
+|+++ |++ .++|+||+|||.+.+++.++.|+++|+|+|++|++.++...++||+|||++.+.. .
T Consensus 55 ~~~~~-~~~~~v~v~~~~e~l~~~vDvV~~aTp~~~s~~~a~~~~~aG~kvV~~sa~~~~~~~~~~v~~vN~~~~~~--~ 131 (340)
T 1b7g_O 55 QSIKK-FEESGIPVAGTVEDLIKTSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGGEKAEVADISFSALCNYNEALG--K 131 (340)
T ss_dssp GGHHH-HHTTTCCCCCCHHHHHHHCSEEEECCSTTHHHHHHHHHHHTTCEEEECTTSCGGGSSCEECHHHHHHHHTT--C
T ss_pred CHHHH-hcccccccccCHhHhhcCCCEEEECCCCchhHHHHHHHHHcCCeEEEeCCCCCCCCCCEEEcCcchHHHcC--C
Confidence 23222 321 1699999999999999999999999998888888865433479999999876644 3
Q ss_pred eEEecCCcchhhhhhHHHHHhhhcCeeEEEEEeeeccccchhhhccccccchhhhhhhhccccC----CCchhHHHHhhc
Q 012940 233 NIVSNASCTTNCLAPFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPT----STGAAKAVSLVM 308 (453)
Q Consensus 233 ~IVSnaSCTTn~Lapvlk~L~d~fGI~~~~mTTiha~Tg~Q~llD~~~~d~rr~Raaa~NIIPt----~tGaakav~kVl 308 (453)
++|||||||||||+|+||+|+++|||+++.|||+|+++. ++++ .|++..||+|+ .+|+++++.+++
T Consensus 132 ~iIsnpsCtt~~l~~~lk~L~~~~gI~~~~~tt~~~~~~-------~~~~---~~~~~~niip~~~~i~t~~a~ev~~vl 201 (340)
T 1b7g_O 132 KYIRVVSCNTTALLRTICTVNKVSKVEKVRATIVRRAAD-------QKEV---KKGPINSLVPDPATVPSHHAKDVNSVI 201 (340)
T ss_dssp SEEEECCHHHHHHHHHHHHHHTTSCEEEEEEEEEEESSC-------TTCC---SCCCSSCCEESSSSSSCTHHHHHHTTS
T ss_pred CCcccCCcHHHHHHHHHHHHHHhCCeEEEEEEEEeccCC-------cccc---hHHHHcCCCCCCcCCCCCchhHHHHhC
Confidence 599999999999999999999999999999999998863 3343 35789999987 689999999999
Q ss_pred cccCCceeEEEEEeeecceeEEEEEEEEccCCCCHHHHHHHHHHccc
Q 012940 309 PQLKGKLNGIALRVPTPNVSVVDLVVNVEKKGITAEDVNAAFRKAAE 355 (453)
Q Consensus 309 PeL~gKisgtavRVPv~~gs~vdltv~lek~~vt~eeI~~al~~aa~ 355 (453)
|+|+ |+++|+||||++||+++++++++++ +|+|||+++|++++.
T Consensus 202 p~l~--l~~~a~rVPv~~gh~~~l~v~l~~~-~t~eei~~~l~~a~~ 245 (340)
T 1b7g_O 202 RNLD--IATMAVIAPTTLMHMHFINITLKDK-VEKKDILSVLENTPR 245 (340)
T ss_dssp TTCE--EEEEEEEESCSSCEEEEEEEEESSC-CCHHHHHHHHHTCTT
T ss_pred CCCc--EEEEEEEeccCCeEEEEEEEEECCC-CCHHHHHHHHHcCCC
Confidence 9995 9999999999999999999999998 899999999998774
No 29
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=100.00 E-value=1.4e-45 Score=377.40 Aligned_cols=239 Identities=15% Similarity=0.157 Sum_probs=198.3
Q ss_pred eeEEEEc-CChhHHHHHH-HHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeC
Q 012940 87 LKVAING-FGRIGRNFLR-CWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr-~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~ 164 (453)
+|||||| ||+||+.++| +|.+++ ++++.| |+++|+| +|+ .+. .++|+.+.+...
T Consensus 2 ~kVaIvGAtG~vG~~llr~ll~~~~---~~~v~i----------~~~~~~s-~G~---~v~-------~~~g~~i~~~~~ 57 (367)
T 1t4b_A 2 QNVGFIGWRGMVGSVLMQRMVEERD---FDAIRP----------VFFSTSQ-LGQ---AAP-------SFGGTTGTLQDA 57 (367)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTG---GGGSEE----------EEEESSS-TTS---BCC-------GGGTCCCBCEET
T ss_pred cEEEEECCCCHHHHHHHHHHHhcCC---CCeEEE----------EEEEeCC-CCC---Ccc-------ccCCCceEEEec
Confidence 6999999 9999999999 666553 443333 6677776 766 121 144556666555
Q ss_pred CCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCC---CCCCCCeEEeccCccccCcc--CC-eEEecC
Q 012940 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA---KGADIPTYVVGVNEKDYDHE--VA-NIVSNA 238 (453)
Q Consensus 165 ~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISaps---~d~dvPtvV~gVN~~~~~~~--~~-~IVSna 238 (453)
.++++ |+ ++|+||+|+|.+.+++.+++|+++|+|++||++++ +++++|++|||||++.|+.. +. ++|+||
T Consensus 58 ~~~~~--~~--~~DvVf~a~g~~~s~~~a~~~~~~G~k~vVID~ss~~R~~~~~~~~vpevN~~~i~~~~~~g~~~Ianp 133 (367)
T 1t4b_A 58 FDLEA--LK--ALDIIVTCQGGDYTNEIYPKLRESGWQGYWIDAASSLRMKDDAIIILDPVNQDVITDGLNNGIRTFVGG 133 (367)
T ss_dssp TCHHH--HH--TCSEEEECSCHHHHHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CChHH--hc--CCCEEEECCCchhHHHHHHHHHHCCCCEEEEcCChhhccCCCCcEEeCCcCHHHHhhhhhcCCCEEEeC
Confidence 44543 74 89999999999999999999999999989999886 35678999999999999752 12 699999
Q ss_pred CcchhhhhhHHHHHhhhcCeeEEEEEeeeccccchh--h-----------------hccccc---cchh-----------
Q 012940 239 SCTTNCLAPFVKVMDEELGIVKGAMTTTHSYTGDQR--L-----------------LDASHR---DLRR----------- 285 (453)
Q Consensus 239 SCTTn~Lapvlk~L~d~fGI~~~~mTTiha~Tg~Q~--l-----------------lD~~~~---d~rr----------- 285 (453)
||+|+|++|+|+||+++|+|+++.|||||++||+++ . +|.+++ |+||
T Consensus 134 ~Cttt~~~~al~pL~~~~~I~~~~vtt~~a~SGaG~~~~~el~~~~~~l~~~~~~~~~~~~~~ild~~r~~~~~~~~~~~ 213 (367)
T 1t4b_A 134 NCTVSLMLMSLGGLFANDLVDWVSVATYQAASGGGARHMRELLTQMGHLYGHVADELATPSSAILDIERKVTTLTRSGEL 213 (367)
T ss_dssp CHHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGTCHHHHHHHHHHHHHHHHHTHHHHTCTTCCHHHHHHHHHHHHHHTCS
T ss_pred CHHHHHHHHHHHHHHHcCCCcEEEEEEEeccccccccchHHHHHHHhhhhccccccccccccchhhhhhccccccccccC
Confidence 999999999999999999999999999999999943 1 344554 7776
Q ss_pred -----hhhhhhccccCCCc------------hhHHHHhhccc-cCCceeEEEEEeeecceeEEEEEEEEccCCCCHHHHH
Q 012940 286 -----ARAAALNIVPTSTG------------AAKAVSLVMPQ-LKGKLNGIALRVPTPNVSVVDLVVNVEKKGITAEDVN 347 (453)
Q Consensus 286 -----~Raaa~NIIPt~tG------------aakav~kVlPe-L~gKisgtavRVPv~~gs~vdltv~lek~~vt~eeI~ 347 (453)
++++++|+||+++| ..++++|++|+ .+.+|+++|+|||+++||+++++++++++ ++.|||+
T Consensus 214 ~~~~f~~~~a~NiiP~~~~~~~~~~t~EE~k~~~e~~kil~~~~~~~v~~t~vrVPv~~g~~~~v~v~l~~~-~t~eei~ 292 (367)
T 1t4b_A 214 PVDNFGVPLAGSLIPWIDKQLDNGQSREEWKGQAETNKILNTSSVIPVDGLCVRVGALRCHSQAFTIKLKKD-VSIPTVE 292 (367)
T ss_dssp CCTTTSSCCTTCEESCCSCBCTTSCBHHHHHHHHHHHHHHTCSSCCCEEEECCEESCSSEEEEEEEEEESSC-CCHHHHH
T ss_pred cccccchhhhCceEEEecCccccCccHHHHHHHHHHHHHhCcCCCceEEEEEEEcCccceEEEEEEEEECCC-CCHHHHH
Confidence 58899999999987 67788999976 56689999999999999999999999998 8999999
Q ss_pred HHHHHcc
Q 012940 348 AAFRKAA 354 (453)
Q Consensus 348 ~al~~aa 354 (453)
++|++++
T Consensus 293 ~~l~~~~ 299 (367)
T 1t4b_A 293 ELLAAHN 299 (367)
T ss_dssp HHHHHHC
T ss_pred HHHHhcC
Confidence 9999874
No 30
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=100.00 E-value=5.8e-45 Score=367.42 Aligned_cols=237 Identities=21% Similarity=0.254 Sum_probs=203.9
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccc--cceeecCceEEEecCCeEEECCeEEEEE
Q 012940 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYD--SLLGTFKADVKIVDNETISVDGKLIKVV 162 (453)
Q Consensus 85 m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyD--S~~G~f~~~v~~~~~~~l~v~Gk~I~v~ 162 (453)
|++||||||||+|||.++|+|.++ ++++|++|+|. +++.++++++|| ++||+|++.+...+++.+.+.+
T Consensus 1 M~irVgIiG~G~iG~~~~r~l~~~--~~~elvav~d~-~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~------ 71 (334)
T 2czc_A 1 MKVKVGVNGYGTIGKRVAYAVTKQ--DDMELIGITKT-KPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAG------ 71 (334)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTC--TTEEEEEEEES-SCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSC------
T ss_pred CCcEEEEEeEhHHHHHHHHHHhcC--CCCEEEEEEcC-CHHHHHHHHHhcCccccccccccceeccCCceEEcC------
Confidence 568999999999999999999876 56999999997 578888999888 8999988765111122222222
Q ss_pred eCCCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCC-C-CeEEeccCccccCccCCeEEecCCc
Q 012940 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGAD-I-PTYVVGVNEKDYDHEVANIVSNASC 240 (453)
Q Consensus 163 ~~~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISaps~d~d-v-PtvV~gVN~~~~~~~~~~IVSnaSC 240 (453)
+++++.| ++|+|++|||.+.+.+.++.|+++| |+||+++|.+. | . |++|+|||++.|.. .+||+||||
T Consensus 72 ---d~~~l~~---~vDvV~~aTp~~~h~~~a~~~l~aG-k~Vi~sap~~~-d~~~~~~v~~vn~~~~~~--~~ii~~~~C 141 (334)
T 2czc_A 72 ---TLNDLLE---KVDIIVDATPGGIGAKNKPLYEKAG-VKAIFQGGEKA-DVAEVSFVAQANYEAALG--KNYVRVVSC 141 (334)
T ss_dssp ---BHHHHHT---TCSEEEECCSTTHHHHHHHHHHHHT-CEEEECTTSCG-GGSSEEECHHHHGGGGTT--CSEEEECCH
T ss_pred ---cHHHhcc---CCCEEEECCCccccHHHHHHHHHcC-CceEeeccccc-ccccceEEeccCHHHHhh--CCcEEecCc
Confidence 3344434 7999999999999999999999999 57999999753 4 4 69999999999975 579999999
Q ss_pred chhhhhhHHHHHhhhcCeeEEEEEeeeccccchhhhccccccchhhhhhhhccccC---CCchhHHHHhhccccCCceeE
Q 012940 241 TTNCLAPFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPT---STGAAKAVSLVMPQLKGKLNG 317 (453)
Q Consensus 241 TTn~Lapvlk~L~d~fGI~~~~mTTiha~Tg~Q~llD~~~~d~rr~Raaa~NIIPt---~tGaakav~kVlPeL~gKisg 317 (453)
+||||+|++++|++. |+++.|+|+|++|+.| |++|++++||||+ .+|++++++++|| |+ +++
T Consensus 142 ~t~~l~P~~~~l~~~--I~~g~i~ti~a~s~~~----------~~~r~~~~niiP~i~~~~g~~~~i~~~l~-l~--l~~ 206 (334)
T 2czc_A 142 NTTGLVRTLSAIREY--ADYVYAVMIRRAADPN----------DTKRGPINAIKPTVEVPSHHGPDVQTVIP-IN--IET 206 (334)
T ss_dssp HHHHHHHHHHHHGGG--EEEEEEEEEEESSCTT----------CCSCCCSSCCEECCSSSCTHHHHHTTTSC-CC--EEE
T ss_pred HHHHHHHHHHHHHHH--hccccEEEEEEecCcc----------ccccChhhcEEeccCCCCchhhhhheEEE-EE--EEE
Confidence 999999999999987 9999999999999863 5678999999999 8999999999999 85 999
Q ss_pred EEEEeeecceeEEEEEEEEccCCCCHHHHHHHHHHcccC
Q 012940 318 IALRVPTPNVSVVDLVVNVEKKGITAEDVNAAFRKAAEG 356 (453)
Q Consensus 318 tavRVPv~~gs~vdltv~lek~~vt~eeI~~al~~aa~~ 356 (453)
+|+||||++||+++++++++++ +++|||+++|++++..
T Consensus 207 ~~~rVPv~~~~~~~~~~~~~~~-~~~e~i~~~~~~~~~~ 244 (334)
T 2czc_A 207 MAFVVPTTLMHVHSVMVELKKP-LTKDDVIDIFENTTRV 244 (334)
T ss_dssp EEEEESCSSCEEEEEEEEESSC-CCHHHHHHHHHTSTTE
T ss_pred EEEEcCCCceEEEEEEEEECCC-CCHHHHHHHHHhccCC
Confidence 9999999999999999999998 8999999999998754
No 31
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=100.00 E-value=1.3e-41 Score=346.99 Aligned_cols=295 Identities=13% Similarity=0.106 Sum_probs=221.5
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeC
Q 012940 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (453)
Q Consensus 86 ~ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~ 164 (453)
++||||+| ||+|||.++|+|.++ +++++++|++..+.. .+||++|++|.+.+ . . .+.+ +
T Consensus 16 ~~kV~IiGAtG~iG~~llr~L~~~--p~~elvai~~~~~~g-----~~~~~~~~~~~~~v-~---~-------dl~~-~- 75 (359)
T 1xyg_A 16 DIRIGLLGASGYTGAEIVRLLANH--PHFQVTLMTADRKAG-----QSMESVFPHLRAQK-L---P-------TLVS-V- 75 (359)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHTC--SSEEEEEEBCSTTTT-----SCHHHHCGGGTTSC-C---C-------CCBC-G-
T ss_pred CcEEEEECcCCHHHHHHHHHHHcC--CCcEEEEEeCchhcC-----CCHHHhCchhcCcc-c---c-------ccee-c-
Confidence 48999999 999999999999976 569999999853221 56789999887543 1 0 1112 1
Q ss_pred CCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCC---CCC-------------------CCCeEEecc
Q 012940 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA---KGA-------------------DIPTYVVGV 222 (453)
Q Consensus 165 ~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISaps---~d~-------------------dvPtvV~gV 222 (453)
+ ++ .|+ ++|+||+|+|.+.+++.++.| ++|+ +||+.++ .++ +.+..|||+
T Consensus 76 -~-~~-~~~--~vDvVf~atp~~~s~~~a~~~-~aG~--~VId~sa~~R~~~~~~y~~~y~~~~~~~~~l~~~vygvpE~ 147 (359)
T 1xyg_A 76 -K-DA-DFS--TVDAVFCCLPHGTTQEIIKEL-PTAL--KIVDLSADFRLRNIAEYEEWYGQPHKAVELQKEVVYGLTEI 147 (359)
T ss_dssp -G-GC-CGG--GCSEEEECCCTTTHHHHHHTS-CTTC--EEEECSSTTTCSCHHHHHHHHSSCCSCHHHHTTCEECCHHH
T ss_pred -c-hh-Hhc--CCCEEEEcCCchhHHHHHHHH-hCCC--EEEECCccccCCchhhhhhhhcCCcCChhhcCCceEECCcc
Confidence 1 22 575 899999999999999999999 9998 4565544 221 233444455
Q ss_pred CccccCccCCeEEecCCcchhhhhhHHHHHhhhcCee--EEEEEeeeccccchh-hhccccccchhhhhhhhccccCCCc
Q 012940 223 NEKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIV--KGAMTTTHSYTGDQR-LLDASHRDLRRARAAALNIVPTSTG 299 (453)
Q Consensus 223 N~~~~~~~~~~IVSnaSCTTn~Lapvlk~L~d~fGI~--~~~mTTiha~Tg~Q~-llD~~~~d~rr~Raaa~NIIPt~tG 299 (453)
|++.|+. .+|||||||+|||++|+|+||+++|+|+ ++.|||+|+|||+|+ ..|.+|.++ ++.||+|+.+|
T Consensus 148 n~~~i~~--~~iIanpgC~tt~~~~~l~pL~~~~~i~~~~i~v~t~~~~SGaG~~~~~~~~~~~-----~~~ni~py~~~ 220 (359)
T 1xyg_A 148 LREDIKK--ARLVANPGCYPTTIQLPLVPLLKANLIKHENIIIDAKSGVSGAGRGAKEANLYSE-----IAEGISSYGVT 220 (359)
T ss_dssp HHHHHHT--CSEEECCCHHHHHHHHHHHHHHHTTCBCSSSCEEEEEEEGGGGCSCCCGGGBHHH-----HTTCCEECSCS
T ss_pred CHHHhcc--CCEEECCCcHHHHHHHHHHHHHHcCCCCCCeEEEEEEEEccccCcccchhhhhHH-----HhcCeeccccc
Confidence 9999975 5899999999999999999999999999 999999999999998 577766543 57899999988
Q ss_pred hhHHHHhhccccC----------CceeEEEEEeeecceeEEEEEEEEccCCCCHHHHHHHHHHcccC-CCCcceeecccC
Q 012940 300 AAKAVSLVMPQLK----------GKLNGIALRVPTPNVSVVDLVVNVEKKGITAEDVNAAFRKAAEG-PLKGILAVCDVP 368 (453)
Q Consensus 300 aakav~kVlPeL~----------gKisgtavRVPv~~gs~vdltv~lek~~vt~eeI~~al~~aa~~-~lkgil~~~~~~ 368 (453)
.. +++||++ .+++++++|||+++||+++++++++++ +|.|||+++|+++.++ ++--++...+-|
T Consensus 221 ~h----~h~pEi~~~l~~~~~~~~~v~~t~~rvP~~~G~~~~i~~~l~~~-~t~eei~~~~~~~y~~~~~V~v~~~~~~p 295 (359)
T 1xyg_A 221 RH----RHVPEIEQGLSDVAQSKVTVSFTPHLMPMIRGMQSTIYVEMAPG-VRTEDLHQQLKTSYEDEEFVKVLDEGVVP 295 (359)
T ss_dssp CC----THHHHHHHHHHHHHTSCCCCEEECEEESSSSCEEEEEEEEBCTT-CCHHHHHHHHHHHHTTCSSEEECCTTCCC
T ss_pred cc----ccHHHHHHHHHHhcCCCCCEEEEEEEecccceEEEEEEEEeCCC-CCHHHHHHHHHHhhCCCCCEEEcCCCCCC
Confidence 53 3444433 389999999999999999999999998 8999999999987643 332222211112
Q ss_pred eEeecCCCCCcceEEeCCCCceecCCeEEEEEEecCC-CchhhhHHHHHHHHHhcCC
Q 012940 369 LVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNE-WGYSQRVVDLAHLVATKWP 424 (453)
Q Consensus 369 ~VS~Df~~~~~S~i~D~~~t~v~~~~~vKl~~WYDNE-~GYs~r~vdl~~~~~~~~~ 424 (453)
-. .+..|..+..|- ..... ..+.+.+++|.||- +|.|-+-|-.+++|....+
T Consensus 296 ~~-~~v~g~n~~~ig-~~~d~--~~~~l~~~~~~DNl~kGAAg~Avq~~nl~~g~~e 348 (359)
T 1xyg_A 296 RT-HNVRGSNYCHMS-VFPDR--IPGRAIIISVIDNLVKGASGQALQNLNIMLGYPE 348 (359)
T ss_dssp BG-GGTTTSSCEEEE-EEECS--STTEEEEEEEECTTTTTTHHHHHHHHHHHTTSCT
T ss_pred CH-HHhcCCCeEEEE-EEEeC--CCCEEEEEEEehhhhHhHHHHHHHHHHHHhCCCc
Confidence 11 245555544442 11111 23578899999999 8999999999999877543
No 32
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=100.00 E-value=2.1e-41 Score=343.82 Aligned_cols=242 Identities=17% Similarity=0.220 Sum_probs=195.9
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeC
Q 012940 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (453)
Q Consensus 86 ~ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~ 164 (453)
++||||+| ||+|||.++|+|.++ ++++|++|++... . .--+|+++|+.+. ++.+.++++.+.+ .+
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~--p~~elvai~~s~~--~--~g~~~~~~~~~~~-------~~~~~~~~~~~~~-~~ 69 (350)
T 2ep5_A 4 KIKVSLLGSTGMVGQKMVKMLAKH--PYLELVKVSASPS--K--IGKKYKDAVKWIE-------QGDIPEEVQDLPI-VS 69 (350)
T ss_dssp CEEEEEESCSSHHHHHHHHHHTTC--SSEEEEEEECCGG--G--TTSBHHHHCCCCS-------SSSCCHHHHTCBE-EC
T ss_pred CcEEEEECcCCHHHHHHHHHHHhC--CCcEEEEEecChh--h--cCCCHHHhcCccc-------ccccccCCceeEE-ee
Confidence 58999999 999999999999876 5699999984310 0 0123577776653 1122233333444 33
Q ss_pred CCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCC---CCCCCCeEEeccCccccCc-c--------CC
Q 012940 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA---KGADIPTYVVGVNEKDYDH-E--------VA 232 (453)
Q Consensus 165 ~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISaps---~d~dvPtvV~gVN~~~~~~-~--------~~ 232 (453)
.+++. |. ++|+||+|+|.+.+++.++.|+++|+| ||++++ +++++|++|||||++.|+. + +.
T Consensus 70 ~d~~~--~~--~vDvVf~atp~~~s~~~a~~~~~aG~~--VId~s~~~R~~~~~~~~vpevn~~~~~~~e~~r~~~~~~~ 143 (350)
T 2ep5_A 70 TNYED--HK--DVDVVLSALPNELAESIELELVKNGKI--VVSNASPFRMDPDVPLINPEINWEHLELLKFQKERKGWKG 143 (350)
T ss_dssp SSGGG--GT--TCSEEEECCCHHHHHHHHHHHHHTTCE--EEECSSTTTTCTTSCBCCHHHHGGGGGGHHHHHHHHTCSS
T ss_pred CCHHH--hc--CCCEEEECCChHHHHHHHHHHHHCCCE--EEECCccccCCCCCCeeCCccCHHHhcChHhhhhhcccCc
Confidence 34443 63 899999999999999999999999984 677665 3557899999999998873 1 24
Q ss_pred eEEecCCcchhhhhhHHHHHhhhcCeeEEEEEeeeccccchhhhccccccchhhhhhhhccccCCCch-hHHH---Hhhc
Q 012940 233 NIVSNASCTTNCLAPFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGA-AKAV---SLVM 308 (453)
Q Consensus 233 ~IVSnaSCTTn~Lapvlk~L~d~fGI~~~~mTTiha~Tg~Q~llD~~~~d~rr~Raaa~NIIPt~tGa-akav---~kVl 308 (453)
+|||||||+|||++|+|+||+++|||+++.|||+|+|||+|+. +.+ .+.+++||+|+++|+ .|.+ .++|
T Consensus 144 ~iIanpgC~tt~~~l~l~pL~~~~gi~~i~v~t~~~~SGaG~~--~~~-----~~~~~~ni~py~~~~e~k~~~E~~~~l 216 (350)
T 2ep5_A 144 ILVKNPNCTAAIMSMPIKPLIEIATKSKIIITTLQAVSGAGYN--GIS-----FMAIEGNIIPYIKGEEDKIAKELTKLN 216 (350)
T ss_dssp EEEECCCHHHHHHHHHHGGGHHHHHTSEEEEEEEECGGGGCSS--SSB-----HHHHTTCCBCCCTTHHHHHHHHHHHHT
T ss_pred eEEEcCchHHHHHHHHHHHHHHhcCCcEEEEEEEEecCcCCCC--CCC-----ChHHhCCEEeccCCcchHHHHHHHHHH
Confidence 7999999999999999999999999999999999999999986 222 467899999999995 6655 7899
Q ss_pred cccCC--------ceeEEEEEeeecceeEEEEEEEEccCCCCHHHHHHHHHHccc
Q 012940 309 PQLKG--------KLNGIALRVPTPNVSVVDLVVNVEKKGITAEDVNAAFRKAAE 355 (453)
Q Consensus 309 PeL~g--------KisgtavRVPv~~gs~vdltv~lek~~vt~eeI~~al~~aa~ 355 (453)
|+|+| |++++++|||+++||+++++++++++ +|.|||+++|+++..
T Consensus 217 ~~~~g~~~~~~~~~v~~t~~rvP~~~g~~~~i~~~l~~~-~t~eei~~~~~~~~~ 270 (350)
T 2ep5_A 217 GKLENNQIIPANLDSTVTSIRVPTRVGHMGVINIVTNER-INIEEIKKTLKNFKS 270 (350)
T ss_dssp CEECSSSEECCCCEEEEEEEECSCSSCEEEEEEEECCSC-CCHHHHHHHHHTCCC
T ss_pred hhccccccccccccEEEEeEEecccceEEEEEEEEECCC-CCHHHHHHHHHHhhc
Confidence 99877 89999999999999999999999998 899999999998863
No 33
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=7.7e-40 Score=332.44 Aligned_cols=245 Identities=19% Similarity=0.247 Sum_probs=193.2
Q ss_pred cceeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC-CCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEE
Q 012940 84 VAKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND-SGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKV 161 (453)
Q Consensus 84 ~m~ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd-~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v 161 (453)
.|++||||+| ||+|||.++|+|.++ ++++|++|++ .... --++++.|+.+... .+..+++.+.+
T Consensus 6 ~M~~kV~IiGAtG~iG~~llr~L~~~--p~~ev~~i~~s~~~~-----g~~~~~~~~~~~~~-------~~~~~~~~~~~ 71 (354)
T 1ys4_A 6 KMKIKVGVLGATGSVGQRFVQLLADH--PMFELTALAASERSA-----GKKYKDACYWFQDR-------DIPENIKDMVV 71 (354)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTC--SSEEEEEEEECTTTT-----TSBHHHHSCCCCSS-------CCCHHHHTCBC
T ss_pred cccceEEEECcCCHHHHHHHHHHhcC--CCCEEEEEEcccccc-----cccHHHhccccccc-------ccccCceeeEE
Confidence 3678999999 999999999999876 5699999984 2111 01246667654210 01112222333
Q ss_pred EeCCCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCC---CCCCCeEEeccCccccCc-c-------
Q 012940 162 VSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAK---GADIPTYVVGVNEKDYDH-E------- 230 (453)
Q Consensus 162 ~~~~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISaps~---d~dvPtvV~gVN~~~~~~-~------- 230 (453)
.+.++++ |.+.++|+||+|+|.+.+++.++.|+++|++ ||++++. +++.|++|||||++.|+. +
T Consensus 72 -~~~~~~~--~~~~~~DvV~~atp~~~~~~~a~~~~~aG~~--VId~s~~~R~~~~~~~~vpevn~~~~~~~e~~r~~~~ 146 (354)
T 1ys4_A 72 -IPTDPKH--EEFEDVDIVFSALPSDLAKKFEPEFAKEGKL--IFSNASAYRMEEDVPLVIPEVNADHLELIEIQREKRG 146 (354)
T ss_dssp -EESCTTS--GGGTTCCEEEECCCHHHHHHHHHHHHHTTCE--EEECCSTTTTCTTSCBCCHHHHGGGGGHHHHHHHHHC
T ss_pred -EeCCHHH--HhcCCCCEEEECCCchHHHHHHHHHHHCCCE--EEECCchhcCCCCCCccCcccCHHHhcChhhhhhhcc
Confidence 2235544 7435899999999999999999999999983 8888763 456899999999998873 1
Q ss_pred -CCeEEecCCcchhhhhhHHHHHhhhcCeeEEEEEeeeccccchhhhccccccchhhhhhhhccccCCCch-hH---HHH
Q 012940 231 -VANIVSNASCTTNCLAPFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGA-AK---AVS 305 (453)
Q Consensus 231 -~~~IVSnaSCTTn~Lapvlk~L~d~fGI~~~~mTTiha~Tg~Q~llD~~~~d~rr~Raaa~NIIPt~tGa-ak---av~ 305 (453)
+.+|||||||+|||++|+|+||+++|||+++.|+|+|++||+|+. +.+ .+.+++||+|+.+|. .| ++.
T Consensus 147 ~~~~iIanpgC~tt~~~l~l~pL~~~~gi~~~~v~t~~~~SGaG~~--~~~-----~~~~~~ni~py~~~~~~k~~~Ei~ 219 (354)
T 1ys4_A 147 WDGAIITNPNCSTICAVITLKPIMDKFGLEAVFIATMQAVSGAGYN--GVP-----SMAILDNLIPFIKNEEEKMQTESL 219 (354)
T ss_dssp CSSEEEECCCHHHHHHHHHHHHHHHHHCCSEEEEEEEBCSGGGCTT--TSC-----HHHHTTCCBSCCTTHHHHHHHHHH
T ss_pred cCCeEEECCCHHHHHHHHHHHHHHHhcCCcEEEEEEEEEcCcCCcc--ccc-----chHHhCCEEeccCchhhHHHHHHH
Confidence 246999999999999999999999999999999999999999886 222 357899999999885 44 445
Q ss_pred hhccccCC--------ceeEEEEEeeecceeEEEEEEEEccCCCCHHHHHHHHHHccc
Q 012940 306 LVMPQLKG--------KLNGIALRVPTPNVSVVDLVVNVEKKGITAEDVNAAFRKAAE 355 (453)
Q Consensus 306 kVlPeL~g--------KisgtavRVPv~~gs~vdltv~lek~~vt~eeI~~al~~aa~ 355 (453)
++|++++| +++++++|||+++||+++++++++++ +|.|||+++|+++..
T Consensus 220 ~~l~~~~g~~~~~~~~~v~~~~~rvP~~~G~~~~i~~~l~~~-~t~eei~~~~~~~~~ 276 (354)
T 1ys4_A 220 KLLGTLKDGKVELANFKISASCNRVAVIDGHTESIFVKTKEG-AEPEEIKEVMDKFDP 276 (354)
T ss_dssp HHTSEEETTEEECCCCEEEEECCBCSCSSCEEEEEEEECSSC-CCHHHHHHHHHHCCT
T ss_pred HHHhccccccccCCCceEEEEEEEecccceEEEEEEEEECCC-CCHHHHHHHHHHhhc
Confidence 67777655 79999999999999999999999998 899999999999874
No 34
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=100.00 E-value=2.6e-39 Score=328.22 Aligned_cols=294 Identities=15% Similarity=0.025 Sum_probs=216.3
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeC
Q 012940 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (453)
Q Consensus 86 ~ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~ 164 (453)
++||||+| ||+|||.++|+|.++ +++++++|++..+.. .+|++.|+.|.+.. .+.+
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~--p~~elv~v~s~~~~g-----~~~~~~~~~~~g~~-------------~~~~--- 60 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSH--PYLEVKQVTSRRFAG-----EPVHFVHPNLRGRT-------------NLKF--- 60 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTC--TTEEEEEEBCSTTTT-----SBGGGTCGGGTTTC-------------CCBC---
T ss_pred CCEEEEECCCCHHHHHHHHHHHcC--CCcEEEEEECchhhC-----chhHHhCchhcCcc-------------cccc---
Confidence 48999999 999999999999876 569999999852211 46788888876421 1122
Q ss_pred CCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCC-CCC------------------CCCeEEeccCcc
Q 012940 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA-KGA------------------DIPTYVVGVNEK 225 (453)
Q Consensus 165 ~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISaps-~d~------------------dvPtvV~gVN~~ 225 (453)
.+++ .|. ++|+||+|+|.+.+++.+++|+++|++.|.+|++. .++ +.|..||++|++
T Consensus 61 ~~~~--~~~--~vDvV~~a~g~~~s~~~a~~~~~aG~~VId~Sa~~r~~~~~~y~~~y~~h~~~e~l~~~vygvpE~n~~ 136 (345)
T 2ozp_A 61 VPPE--KLE--PADILVLALPHGVFAREFDRYSALAPVLVDLSADFRLKDPELYRRYYGEHPRPDLLGRFVYAVPELYRE 136 (345)
T ss_dssp BCGG--GCC--CCSEEEECCCTTHHHHTHHHHHTTCSEEEECSSTTSCSCHHHHHHHHCCCSSGGGTTSSEECCHHHHHH
T ss_pred cchh--Hhc--CCCEEEEcCCcHHHHHHHHHHHHCCCEEEEcCccccCCChHHHHhhhccccchhhhccCcEeccccCHH
Confidence 1222 373 89999999999999999999999998533334432 331 355555666999
Q ss_pred ccCccCCeEEecCCcchhhhhhHHHHHhhhcCee--EEEEEeeeccccchh-hhccccccchhhhhhhhccccCCCchhH
Q 012940 226 DYDHEVANIVSNASCTTNCLAPFVKVMDEELGIV--KGAMTTTHSYTGDQR-LLDASHRDLRRARAAALNIVPTSTGAAK 302 (453)
Q Consensus 226 ~~~~~~~~IVSnaSCTTn~Lapvlk~L~d~fGI~--~~~mTTiha~Tg~Q~-llD~~~~d~rr~Raaa~NIIPt~tGaak 302 (453)
.++. .+|||||||+|||++|+|+||+++|+|+ ++.|+|+|++||+|+ .+|.+|.++ +..||+|+.+|+
T Consensus 137 ~i~~--~~iIanp~C~tt~~~~~l~pL~~~~~i~~~~i~v~t~~~~SGaG~~~~~~~~~~~-----~~~n~~py~~~~-- 207 (345)
T 2ozp_A 137 ALKG--ADWIAGAGCNATATLLGLYPLLKAGVLKPTPIFVTLLISTSAGGAEASPASHHPE-----RAGSIRVYKPTG-- 207 (345)
T ss_dssp HHHT--CSEEECCCHHHHHHHHHHHHHHHTTCBCSSCEEEEEEECSGGGCSSCCGGGCHHH-----HTTCCEEEECSC--
T ss_pred Hhhc--CCEEeCCCcHHHHHHHHHHHHHHhcCCCCCeEEEEEEEEccccCccccccccchh-----hccccccCCCCC--
Confidence 9975 5899999999999999999999999999 999999999999986 467766443 578999998874
Q ss_pred HHHhhccccC-----C-ceeEEEEEeeecceeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCcceeeccc-------Ce
Q 012940 303 AVSLVMPQLK-----G-KLNGIALRVPTPNVSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILAVCDV-------PL 369 (453)
Q Consensus 303 av~kVlPeL~-----g-KisgtavRVPv~~gs~vdltv~lek~~vt~eeI~~al~~aa~~~lkgil~~~~~-------~~ 369 (453)
.+++||++ + +++++++|||+++||+++++++++++ +|.|||+++|+++.++. .+| .+.++ |-
T Consensus 208 --h~~~pei~~~l~~~~~v~~~~~rvP~~~g~~~~i~~~l~~~-~t~eei~~~~~~~y~~~-~~v-~v~~~~~~~~~~p~ 282 (345)
T 2ozp_A 208 --HRHTAEVVENLPGRPEVHLTAIATDRVRGILMTAQCFVQDG-WSERDVWQAYREAYAGE-PFI-RLVKQKKGVHRYPD 282 (345)
T ss_dssp --CTHHHHHHHTSSSCCCEEEEEEECSCSSCEEEEEEEEBCTT-CCHHHHHHHHHHHHTTC-TTE-EECCCSSSSCCSCC
T ss_pred --ccChHhHHHHhCCCCCeEEEEEEeccccEEEEEEEEEeCCC-CCHHHHHHHHHHHhCCC-CCE-EEEeCCCCcCCCCC
Confidence 56677765 5 89999999999999999999999998 89999999999976532 222 22211 11
Q ss_pred EeecCCCCCcceEEeCCCCceecCCeEEEEEEecCC-CchhhhHHHHHHHHHhcCC
Q 012940 370 VSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNE-WGYSQRVVDLAHLVATKWP 424 (453)
Q Consensus 370 VS~Df~~~~~S~i~D~~~t~v~~~~~vKl~~WYDNE-~GYs~r~vdl~~~~~~~~~ 424 (453)
. .+..|..+..|- .. .-...+.+.+++=-||= +|=|-+-|-.+++|....+
T Consensus 283 ~-~~~~g~~~~~ig-~~--~d~~~~~~~~~~~~DNl~kGAAg~Avq~~nl~~g~~e 334 (345)
T 2ozp_A 283 P-RFVQGTNYADIG-FE--LEEDTGRLVVMTAIDNLVKGTAGHALQALNVRMGWPE 334 (345)
T ss_dssp H-HHHTTSCCEEEE-EE--EETTTTEEEEEEEECTTTTTTHHHHHHHHHHHTTCCT
T ss_pred H-HHhcCCceEEEE-EE--EeCCCCEEEEEEEeccHHHHHHHHHHHHHHHHhCcch
Confidence 0 122333332221 00 00012456677777984 6888888888888876433
No 35
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=100.00 E-value=5.6e-38 Score=321.26 Aligned_cols=300 Identities=15% Similarity=0.175 Sum_probs=221.4
Q ss_pred ceeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEe
Q 012940 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (453)
Q Consensus 85 m~ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~ 163 (453)
|++||||+| +|.+|+.++|+|.++++|.++++.+... + + .|+.+.+.|+.+.+..
T Consensus 1 m~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~-------------~---------s--aG~~~~~~~~~~~~~~ 56 (366)
T 3pwk_A 1 MGYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASA-------------R---------S--AGKSLKFKDQDITIEE 56 (366)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECT-------------T---------T--TTCEEEETTEEEEEEE
T ss_pred CCcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEcc-------------c---------c--CCCcceecCCCceEee
Confidence 679999999 9999999999999886666776655421 0 1 4667778887777632
Q ss_pred CCCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC-CCCCCCCeEEeccCccccCccCCeEEecCCcch
Q 012940 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP-AKGADIPTYVVGVNEKDYDHEVANIVSNASCTT 242 (453)
Q Consensus 164 ~~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap-s~d~dvPtvV~gVN~~~~~~~~~~IVSnaSCTT 242 (453)
-+++. |. ++|+||+|+|.+.+++.+++|+++|++.|.+|++ ++++++|++|||||++.++.. .+|||||||+|
T Consensus 57 -~~~~~--~~--~~Dvvf~a~~~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpevN~~~i~~~-~~iIanpgC~t 130 (366)
T 3pwk_A 57 -TTETA--FE--GVDIALFSAGSSTSAKYAPYAVKAGVVVVDNTSYFRQNPDVPLVVPEVNAHALDAH-NGIIACPNCST 130 (366)
T ss_dssp -CCTTT--TT--TCSEEEECSCHHHHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCHHHHGGGGTTC-CSEEECCCHHH
T ss_pred -CCHHH--hc--CCCEEEECCChHhHHHHHHHHHHCCCEEEEcCCccccCCCceEEEccCCHHHHcCC-CCeEECCCcHH
Confidence 33433 43 7999999999999999999999999954444554 356678999999999999764 68999999999
Q ss_pred hhhhhHHHHHhhhcCeeEEEEEeeeccccchh-hhccccc---cc-------------hhh-------hhhhhccccCC-
Q 012940 243 NCLAPFVKVMDEELGIVKGAMTTTHSYTGDQR-LLDASHR---DL-------------RRA-------RAAALNIVPTS- 297 (453)
Q Consensus 243 n~Lapvlk~L~d~fGI~~~~mTTiha~Tg~Q~-llD~~~~---d~-------------rr~-------Raaa~NIIPt~- 297 (453)
||++|+|+||+++|||+++.|||+|++||+++ .++..+. ++ .++ +++++|+||.+
T Consensus 131 t~~~l~l~pL~~~~~i~~i~v~t~~~vSGAG~~~~~~l~~~~~~~~~~~~~~~~~~~~~y~~~~~HrH~~ia~NviP~I~ 210 (366)
T 3pwk_A 131 IQMMVALEPVRQKWGLDRIIVSTYQAVSGAGMGAILETQRELREVLNDGVKPCDLHAEILPSGGDKKHYPIAFNALPQID 210 (366)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEEEEBCGGGGCHHHHHHHHHHHHHHHHHCCCGGGCCCSSSSCTTSSCCCCCTTCCBCCSS
T ss_pred HHHHHHHHHHHHhCCCcEEEEEEEEeccccCcchhhHHHHHHHHHhcccccccccCcccCCcccccccchhhccccceec
Confidence 99999999999999999999999999999854 3332110 00 122 78999999986
Q ss_pred ----CchhHHHHhhc-------cccCCceeEEEEEeeecceeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCcceeecc
Q 012940 298 ----TGAAKAVSLVM-------PQLKGKLNGIALRVPTPNVSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILAVCD 366 (453)
Q Consensus 298 ----tGaakav~kVl-------PeL~gKisgtavRVPv~~gs~vdltv~lek~~vt~eeI~~al~~aa~~~lkgil~~~~ 366 (453)
+|+++++.|++ .....+++.+|+|||+++||++.++++++++ ++.|||+++|++++ +| .+.+
T Consensus 211 ~~~~~g~t~EE~k~~~E~~kil~~~~~~v~ftp~rVPv~rG~~~tv~v~l~~~-~s~eei~~~l~~~~-----~V-~v~~ 283 (366)
T 3pwk_A 211 VFTDNDYTYEEMKMTKETKKIMEDDSIAVSATCVRIPVLSAHSESVYIETKEV-APIEEVKAAIAAFP-----GA-VLED 283 (366)
T ss_dssp CBCTTSSBHHHHHHHHHHHHHTTCTTSEEEEECCBCSCSSCEEEEEEEECSSC-CCHHHHHHHHHHST-----TE-EECC
T ss_pred ccccCCCcHHHHHHHHHHHHHhcCCCCCeEEEEEEechhccEEEEEEEEECCC-CCHHHHHHHHHhCC-----Cc-EEec
Confidence 58888776554 4444579999999999999999999999998 89999999999873 22 1222
Q ss_pred cC------eEeecCCCCCcceEEeCCCCceecCCeEEEEEEecCC-CchhhhHHHHHHHHHhcC
Q 012940 367 VP------LVSVDFRCSDVSSTIDSSLTMVMGDDMVKVVAWYDNE-WGYSQRVVDLAHLVATKW 423 (453)
Q Consensus 367 ~~------~VS~Df~~~~~S~i~D~~~t~v~~~~~vKl~~WYDNE-~GYs~r~vdl~~~~~~~~ 423 (453)
+| -. .+..|..+..|-=.... ...++.+.+++=-||= ||=|-+-|-.+++|.++.
T Consensus 284 ~~~~~~~P~~-~~v~gtn~~~Vgr~r~d-~~~~~~l~~~~~~DNL~KGAAg~AVQn~nlm~~~~ 345 (366)
T 3pwk_A 284 DVAHQIYPQA-INAVGSRDTFVGRIRKD-LDAEKGIHMWVVSDNLLKGAAWNSVQIAETLHERG 345 (366)
T ss_dssp BGGGTBCCCH-HHHTTCSSEEEEEEEEC-SSCTTEEEEEEEECTTTTTTHHHHHHHHHHHHHTT
T ss_pred CcccCCCCch-hHcCCCCEEEEEEEEec-CCCCCEEEEEEEEccHHHhHHHHHHHHHHHHHHcC
Confidence 21 10 13334433322100000 0123457777778994 788888888888887753
No 36
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=100.00 E-value=1.2e-38 Score=325.41 Aligned_cols=307 Identities=19% Similarity=0.231 Sum_probs=216.2
Q ss_pred ceeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcCC--CChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEE
Q 012940 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDS--GGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKV 161 (453)
Q Consensus 85 m~ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd~--~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v 161 (453)
|++||||+| +|-+|+.++|+|.++ |.++|+.+... .+.. +...+.+- .|..++.. ++.+.+
T Consensus 6 ~~~kVaIvGATGyvG~eLlrlL~~h--P~~el~~l~S~~saGk~-~~~~~p~~-~~~~~~~~------------~~~~~v 69 (359)
T 4dpk_A 6 RTLKAAILGATGLVGIEYVRMLSNH--PYIKPAYLAGKGSVGKP-YGEVVRWQ-TVGQVPKE------------IADMEI 69 (359)
T ss_dssp CCEEEEETTTTSTTHHHHHHHHTTC--SSEEEEEEEESTTTTSB-HHHHCCCC-SSSCCCHH------------HHTCBC
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhC--CCceEEEEECchhcCCC-hhHhcccc-cccccccc------------cccceE
Confidence 368999999 999999999998876 56899888532 1211 11111000 00000100 001122
Q ss_pred EeCCCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCC-CCCCCCeEEeccCccccCc--c-------C
Q 012940 162 VSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA-KGADIPTYVVGVNEKDYDH--E-------V 231 (453)
Q Consensus 162 ~~~~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISaps-~d~dvPtvV~gVN~~~~~~--~-------~ 231 (453)
++-+++. |. ++|+||+|+|.+.+++.++.|+++|++.|.+|++. +++++|++|||||++.++. . +
T Consensus 70 -~~~~~~~--~~--~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpEvN~~~i~~i~~~~~~~~~~ 144 (359)
T 4dpk_A 70 -KPTDPKL--MD--DVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSPDHRFDPDVPLLVPELNPHTISLIDEQRKRREWK 144 (359)
T ss_dssp -EECCGGG--CT--TCCEEEECCCTTTHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGHHHHHHHHHTCS
T ss_pred -EeCCHHH--hc--CCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCCccCCCCccEEEcCCCHHHHhhHhhcccccccC
Confidence 1123333 43 79999999999999999999999999776777764 5668999999999999853 1 0
Q ss_pred CeEEecCCcchhhhhhHHHHHhhhcCeeEEEEEeeeccccchhhhccccccchhhhhhhhccccCCCch-hH---HHHhh
Q 012940 232 ANIVSNASCTTNCLAPFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGA-AK---AVSLV 307 (453)
Q Consensus 232 ~~IVSnaSCTTn~Lapvlk~L~d~fGI~~~~mTTiha~Tg~Q~llD~~~~d~rr~Raaa~NIIPt~tGa-ak---av~kV 307 (453)
.+|||||||+|+|++++|+||+++|||+++.|+|+|+|||+|+. +.+ .+.+++|++|+.+|. .| ++.++
T Consensus 145 ~~iIanPgC~tt~~~l~L~PL~~~~gi~~v~v~t~~g~SGaG~~--~~~-----~~~~~~N~ipy~~~~e~k~~~Ei~ki 217 (359)
T 4dpk_A 145 GFIVTTPLCTAQGAAIPLGAIFKDYKMDGAFITTIQSLSGAGYP--GIP-----SLDVVDNILPLGDGYDAKTIKEIFRI 217 (359)
T ss_dssp SEEEECCCHHHHHHHHHHHHHHHHSCEEEEEEEEEECSGGGCSS--CSB-----GGGTTTCCEECCHHHHHHHHHHHHHH
T ss_pred ccEEECCCcHHHHHHHHHHHHHHhcCCcEEEEEEEeccccCCCc--Ccc-----ChHHhCCeEeecCcHHHHHHHHHHHH
Confidence 26999999999999999999999999999999999999999875 222 156899999999876 44 57889
Q ss_pred ccccCC----------ceeEEEEEeeecceeEEEEEEEEccCCCCHHHHHHHHHHcccCC-CCcceeecccCeEee-cCC
Q 012940 308 MPQLKG----------KLNGIALRVPTPNVSVVDLVVNVEKKGITAEDVNAAFRKAAEGP-LKGILAVCDVPLVSV-DFR 375 (453)
Q Consensus 308 lPeL~g----------KisgtavRVPv~~gs~vdltv~lek~~vt~eeI~~al~~aa~~~-lkgil~~~~~~~VS~-Df~ 375 (453)
|++++| +++++|+|||+++||+++++++++++ +|.|||+++|+++.+.+ -.++...+ +|+|-. |-.
T Consensus 218 l~~l~g~~~~~~~~~~~v~~t~~rVPv~rG~~~tv~v~l~~~-~t~eei~~~l~~~~~~~~~~~l~~~p-~~fV~v~~~~ 295 (359)
T 4dpk_A 218 LSEVKRNVDEPKLEDVSLAATTHRIATIHGHYEVLYVSFKEE-TAAEKVKETLENFRGEPQDLKLPTAP-SKPIIVMNED 295 (359)
T ss_dssp HHTSCCSCCCSCGGGCEEEEEEEECSCSSCEEEEEEEEESSC-CCHHHHHHHHHTCCCHHHHTTCTTCC-SCSEEECCST
T ss_pred HhhcccccccccccCCceEEEEEEecccccEEEEEEEEECCC-CCHHHHHHHHHHhhcccccccccCCC-CccEEEcCCC
Confidence 998876 89999999999999999999999998 89999999999987541 11222211 222221 111
Q ss_pred CCCcceEEe--CC----CCce------ecCCeEEEEEEecCC-CchhhhHHHHHHHHHhc
Q 012940 376 CSDVSSTID--SS----LTMV------MGDDMVKVVAWYDNE-WGYSQRVVDLAHLVATK 422 (453)
Q Consensus 376 ~~~~S~i~D--~~----~t~v------~~~~~vKl~~WYDNE-~GYs~r~vdl~~~~~~~ 422 (453)
..|. ...+ +. .... .+++.+.+++=-||= +|=|-.-|-.+++|.++
T Consensus 296 ~~P~-~~~~~g~~~~~~~~~~Vgr~r~~~~~~l~~~~~~DNL~KGAAg~AVQn~nl~~~~ 354 (359)
T 4dpk_A 296 TRPQ-VYFDRWAGDIPGMSVVVGRLKQVNKRMIRLVSLIHNTVRGAAGGGILAAELLVEK 354 (359)
T ss_dssp TCCC-HHHHTTCTTTTTCSEEEEEEEEEETTEEEEEEEECTTTTTTHHHHHHHHHHHHHT
T ss_pred CCCC-HHHhhccCCCcCCeEEEEEEEEcCCCEEEEEEEEhhhhHhHHHHHHHHHHHHHHc
Confidence 0110 0001 00 0001 124567888888994 68888888888887665
No 37
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=100.00 E-value=6.3e-38 Score=320.04 Aligned_cols=307 Identities=18% Similarity=0.229 Sum_probs=216.3
Q ss_pred ceeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcCC--CChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEE
Q 012940 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDS--GGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKV 161 (453)
Q Consensus 85 m~ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd~--~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v 161 (453)
|++||||+| +|-+|+.++|+|.++ |.++|+.+... .+.. +...+.+- .|..++.. ++.+.+
T Consensus 6 ~~~kVaIvGATGyvG~eLlrlL~~h--P~~el~~l~S~~saGk~-~~~~~p~~-~~~~~~~~------------~~~~~v 69 (359)
T 4dpl_A 6 RTLKAAILGATGLVGIEYVRMLSNH--PYIKPAYLAGKGSVGKP-YGEVVRWQ-TVGQVPKE------------IADMEI 69 (359)
T ss_dssp CCEEEEETTTTSTTHHHHHHHHTTC--SSEEEEEEEESTTTTSB-HHHHCCCC-SSSCCCHH------------HHTCBC
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhC--CCceEEEEECchhcCCC-hhHhcccc-cccccccc------------cccceE
Confidence 368999999 999999999998876 56899888532 1211 11111000 00000100 001122
Q ss_pred EeCCCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCC-CCCCCCeEEeccCccccCc--c-------C
Q 012940 162 VSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA-KGADIPTYVVGVNEKDYDH--E-------V 231 (453)
Q Consensus 162 ~~~~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISaps-~d~dvPtvV~gVN~~~~~~--~-------~ 231 (453)
++-+++. |. ++|+||+|+|.+.+++.++.|+++|++.|.+|++. +++++|++|||||++.++. . +
T Consensus 70 -~~~~~~~--~~--~vDvvf~a~p~~~s~~~a~~~~~~G~~vIDlSa~~R~~~~~p~~vpEvN~~~i~~i~~~~~~~~~~ 144 (359)
T 4dpl_A 70 -KPTDPKL--MD--DVDIIFSPLPQGAAGPVEEQFAKEGFPVISNSPDHRFDPDVPLLVPELNPHTISLIDEQRKRREWK 144 (359)
T ss_dssp -EECCGGG--CT--TCCEEEECCCTTTHHHHHHHHHHTTCEEEECSSTTTTCTTSCBCCTTTCGGGGGHHHHHHHHHTCS
T ss_pred -EeCCHHH--hc--CCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCCccCCCCccEEEcCCCHHHHhhHhhcccccccC
Confidence 1123333 43 79999999999999999999999999776777764 5668999999999999853 1 0
Q ss_pred CeEEecCCcchhhhhhHHHHHhhhcCeeEEEEEeeeccccchhhhccccccchhhhhhhhccccCCCch-hH---HHHhh
Q 012940 232 ANIVSNASCTTNCLAPFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGA-AK---AVSLV 307 (453)
Q Consensus 232 ~~IVSnaSCTTn~Lapvlk~L~d~fGI~~~~mTTiha~Tg~Q~llD~~~~d~rr~Raaa~NIIPt~tGa-ak---av~kV 307 (453)
.+|||||||+|+|++++|+||+++|||+++.|+|+|+|||+|+. +.+ .+.+++|++|+.+|. .| ++.++
T Consensus 145 ~~iIanPgC~tt~~~l~L~PL~~~~gi~~v~v~t~~g~SGaG~~--~~~-----~~~~~~N~ipy~~~~e~k~~~Ei~ki 217 (359)
T 4dpl_A 145 GFIVTTPLCTAQGAAIPLGAIFKDYKMDGAFITTIQSLSGAGYP--GIP-----SLDVVDNILPLGDGYDAKTIKEIFRI 217 (359)
T ss_dssp SEEEECCCHHHHHHHHHHHHHHHHSCEEEEEEEEEBCGGGGCSS--CSB-----HHHHTTCCEECCHHHHHHHHHHHHHH
T ss_pred ccEEECCCcHHHHHHHHHHHHHHhcCCcEEEEEEEeccccCCCc--Ccc-----ChHHhCCeEeecCcHHHHHHHHHHHH
Confidence 26999999999999999999999999999999999999999875 222 257899999999876 44 57889
Q ss_pred ccccCC----------ceeEEEEEeeecceeEEEEEEEEccCCCCHHHHHHHHHHcccCC-CCcceeecccCeEe-ecCC
Q 012940 308 MPQLKG----------KLNGIALRVPTPNVSVVDLVVNVEKKGITAEDVNAAFRKAAEGP-LKGILAVCDVPLVS-VDFR 375 (453)
Q Consensus 308 lPeL~g----------KisgtavRVPv~~gs~vdltv~lek~~vt~eeI~~al~~aa~~~-lkgil~~~~~~~VS-~Df~ 375 (453)
|++++| +++++|+|||+++||+++++++++++ +|.|||+++|+++.+.+ -.++...+ +|+|- .|-.
T Consensus 218 l~~l~g~~~~~~~~~~~v~~t~~rVPv~rG~~~tv~v~l~~~-~t~eei~~~l~~~~~~~~~~~l~~~p-~~fV~v~~~~ 295 (359)
T 4dpl_A 218 LSEVKRNVDEPKLEDVSLAATTHRIATIHGHYEVLYVSFKEE-TAAEKVKETLENFRGEPQDLKLPTAP-SKPIIVMNED 295 (359)
T ss_dssp HTTSCCSSCCSCGGGCEEEEECEECSCSSCEEEEEEEEESSC-CCHHHHHHHHHTCCCHHHHTTCTTCC-SCSEEEECST
T ss_pred HhhcccccccccccCCceEEEEEEecccccEEEEEEEEECCC-CCHHHHHHHHHHhhcccccccccCCC-CccEEEcCCC
Confidence 998876 89999999999999999999999998 89999999999987541 11222222 22221 1111
Q ss_pred CCCcceEEe--CC----CCce------ecCCeEEEEEEecCC-CchhhhHHHHHHHHHhc
Q 012940 376 CSDVSSTID--SS----LTMV------MGDDMVKVVAWYDNE-WGYSQRVVDLAHLVATK 422 (453)
Q Consensus 376 ~~~~S~i~D--~~----~t~v------~~~~~vKl~~WYDNE-~GYs~r~vdl~~~~~~~ 422 (453)
..|. ...+ +. .... .+++.+.+++=-||= +|=|-.-|-.+++|.++
T Consensus 296 ~~P~-~~~~~g~~~~~~~~~~Vgr~r~~~~~~l~~~~~~DNL~KGAAg~AVQn~nl~~~~ 354 (359)
T 4dpl_A 296 TRPQ-VYFDRWAGDIPGMSVVVGRLKQVNKRMIRLVSLIHNTVRGAAGGGILAAELLVEK 354 (359)
T ss_dssp TCCC-HHHHTTCTTTTTCSEEEEEEEEEETTEEEEEEEECTTTTTTHHHHHHHHHHHHHT
T ss_pred CCCC-HHHhhccCCCcCCeEEEEEEEEcCCCEEEEEEEEhhhhHhHHHHHHHHHHHHHHc
Confidence 1110 0001 00 0000 124567888888994 68888888888887665
No 38
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=100.00 E-value=2.4e-37 Score=314.26 Aligned_cols=293 Identities=19% Similarity=0.269 Sum_probs=213.3
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeCC
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~~ 165 (453)
+||||+| +|.+|+.++|+|.++++|.++++.+... + + .|+.+.+.|+.+.+.. -
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~-------------~---------~--aG~~~~~~~~~~~~~~-~ 56 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASA-------------R---------S--QGRKLAFRGQEIEVED-A 56 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECT-------------T---------T--SSCEEEETTEEEEEEE-T
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECc-------------c---------c--CCCceeecCCceEEEe-C
Confidence 7999999 9999999999999987777777665421 1 1 4667778888777633 3
Q ss_pred CCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCC---CCCCCCeEEeccCc-cccCccCCeEEecCCcc
Q 012940 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA---KGADIPTYVVGVNE-KDYDHEVANIVSNASCT 241 (453)
Q Consensus 166 dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISaps---~d~dvPtvV~gVN~-~~~~~~~~~IVSnaSCT 241 (453)
+++ .|. ++|+||+|+|.+.+++.+++|+++|+ +||+.++ +++++|++|||||+ +.++...++|||||||+
T Consensus 57 ~~~--~~~--~~Dvvf~a~~~~~s~~~a~~~~~~G~--~vID~Sa~~R~~~~~p~~vpevN~~~~i~~~~~~iIanpgC~ 130 (344)
T 3tz6_A 57 ETA--DPS--GLDIALFSAGSAMSKVQAPRFAAAGV--TVIDNSSAWRKDPDVPLVVSEVNFERDAHRRPKGIIANPNCT 130 (344)
T ss_dssp TTS--CCT--TCSEEEECSCHHHHHHHHHHHHHTTC--EEEECSSTTTTCTTSCBCCTTTSHHHHTTCCTTSEEECCCHH
T ss_pred CHH--Hhc--cCCEEEECCChHHHHHHHHHHHhCCC--EEEECCCccccCCCccEEEccCCCHHHhhhcCCCEEECCCcH
Confidence 333 453 79999999999999999999999999 4555443 56688999999999 98875335899999999
Q ss_pred hhhhhhHHHHHhhhcCeeEEEEEeeeccccchh-hhccccc-----------------------cchhhhhhhhccccCC
Q 012940 242 TNCLAPFVKVMDEELGIVKGAMTTTHSYTGDQR-LLDASHR-----------------------DLRRARAAALNIVPTS 297 (453)
Q Consensus 242 Tn~Lapvlk~L~d~fGI~~~~mTTiha~Tg~Q~-llD~~~~-----------------------d~rr~Raaa~NIIPt~ 297 (453)
|||++|+|+||+++|||+++.|||+|+|||+++ .++..+. ...++...++|++|+.
T Consensus 131 tt~~~l~l~pL~~~~~i~~i~v~t~~~~SGAG~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aynv~p~i 210 (344)
T 3tz6_A 131 TMAAMPVLKVLHDEARLVRLVVSSYQAVSGSGLAGVAELAEQARAVIGGAEQLVYDGGALEFPPPNTYVAPIAFNVVPLA 210 (344)
T ss_dssp HHHHHHHHHHHHHHHCEEEEEEEEEBCGGGGCHHHHHHHHHHHHHHGGGGGGGGTCTTSSCCCCCSSSSSCCTTCCBCCC
T ss_pred HHHHHHHHHHHHHhCCCceEEEEeccCCCccChhhhHHHHHHHHhhhccccccccccccccccccccccccccccccccc
Confidence 999999999999999999999999999999854 2332221 1135667999999974
Q ss_pred -----Cch--hHHHH-------hhccccCCceeEEEEEeeecceeEEEEEEEEccCCCCHHHHHHHHHHcccCCCCccee
Q 012940 298 -----TGA--AKAVS-------LVMPQLKGKLNGIALRVPTPNVSVVDLVVNVEKKGITAEDVNAAFRKAAEGPLKGILA 363 (453)
Q Consensus 298 -----tGa--akav~-------kVlPeL~gKisgtavRVPv~~gs~vdltv~lek~~vt~eeI~~al~~aa~~~lkgil~ 363 (453)
+|+ ++++. |++..-..+++++|+|||+++||+..++++++++ ++.|||+++|++++ +--++.
T Consensus 211 ~~~~~~ghrHt~EE~k~~~e~~kilg~~~~~v~ft~vrvPv~rGh~~tv~v~l~~~-~s~eei~~~l~~~p---~V~v~~ 286 (344)
T 3tz6_A 211 GSLVDDGSGETDEDQKLRFESRKILGIPDLLVSGTCVRVPVFTGHSLSINAEFAQP-LSPERARELLDGAT---GVQLVD 286 (344)
T ss_dssp SCBCSSSSCCBHHHHHHHHHHHHHHTCTTCEEEEECCBCSCSSCEEEEEEEEESSC-CCHHHHHHHHHHCT---TEEECS
T ss_pred cccccCCCcCCHHHHHHHHHHHHhcCCCCCceEEEEEEeceeceEEEEEEEEECCC-CCHHHHHHHHhcCC---CeEEEC
Confidence 344 55543 4553223479999999999999999999999998 89999999999653 211222
Q ss_pred ecccCeEeecCCCCCcceEE----eCCCCceecCCeEEEEEEecCC-CchhhhHHHHHHHHHh
Q 012940 364 VCDVPLVSVDFRCSDVSSTI----DSSLTMVMGDDMVKVVAWYDNE-WGYSQRVVDLAHLVAT 421 (453)
Q Consensus 364 ~~~~~~VS~Df~~~~~S~i~----D~~~t~v~~~~~vKl~~WYDNE-~GYs~r~vdl~~~~~~ 421 (453)
|+. | .+..|..+..|- |... -+++.+.+++=-||= ||=|-.-|-.+++|.+
T Consensus 287 ~P~-p---~~v~gtn~~~Vgrir~d~~~---~~~~~l~~~~~~DNL~KGAAg~AVQ~anll~~ 342 (344)
T 3tz6_A 287 VPT-P---LAAAGVDESLVGRIRRDPGV---PDGRGLALFVSGDNLRKGAALNTIQIAELLTA 342 (344)
T ss_dssp SCC-H---HHHTTCSSEEEEEEEECTTS---GGGCEEEEEEEECTTTTTTHHHHHHHHHHHTC
T ss_pred CCC-h---HHhCCCceEEEEEEEecCCC---CCCCEEEEEEEEcchhHhHHHHHHHHHHHHHh
Confidence 211 1 133444332221 1100 002257777778984 6777777777776654
No 39
>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}
Probab=100.00 E-value=3.7e-38 Score=323.70 Aligned_cols=295 Identities=13% Similarity=0.109 Sum_probs=209.7
Q ss_pred eeeEEEEc-CChhHHHHHH-HHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEE-ECCeEEEEE
Q 012940 86 KLKVAING-FGRIGRNFLR-CWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETIS-VDGKLIKVV 162 (453)
Q Consensus 86 ~ikVaInG-fGrIGR~vlr-~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~-v~Gk~I~v~ 162 (453)
++||||+| +|.+|+.++| +|++++++.++++.+... . .|+.+. +.|+.+.+.
T Consensus 4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~-~------------------------aG~~~~~~~~~~~~v~ 58 (377)
T 3uw3_A 4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTS-N------------------------AGGKAPSFAKNETTLK 58 (377)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS-C------------------------TTSBCCTTCCSCCBCE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEech-h------------------------cCCCHHHcCCCceEEE
Confidence 37999999 9999999999 999887656777666431 0 111111 333333332
Q ss_pred eCCCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCC---CCCCCCeEEeccCccccCcc-CC--eEEe
Q 012940 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA---KGADIPTYVVGVNEKDYDHE-VA--NIVS 236 (453)
Q Consensus 163 ~~~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISaps---~d~dvPtvV~gVN~~~~~~~-~~--~IVS 236 (453)
...+++ .|. ++|+||+|+|.+.+++.+++|+++|+|++||++++ +++++|++|||||++.++.. ++ ++||
T Consensus 59 ~~~~~~--~~~--~vDvvf~a~~~~~s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i~~~~~~~i~~Ia 134 (377)
T 3uw3_A 59 DATSID--DLK--KCDVIITCQGGDYTNDVFPKLRAAGWNGYWIDAASSLRMKDDAVIILDPVNLNVIKDALVNGTKNFI 134 (377)
T ss_dssp ETTCHH--HHH--TCSEEEECSCHHHHHHHHHHHHHTTCCSEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEEE
T ss_pred eCCChh--Hhc--CCCEEEECCChHHHHHHHHHHHHCCCCEEEEeCCcccccCCCCceECCcCCHHHHhhhhhcCCcEEE
Confidence 211222 243 79999999999999999999999999889999886 56678999999999998642 12 4599
Q ss_pred cCCcchhhhhhHHHHHhhhcCeeEEEEEeeeccccchh-hhcccc-----------------------------------
Q 012940 237 NASCTTNCLAPFVKVMDEELGIVKGAMTTTHSYTGDQR-LLDASH----------------------------------- 280 (453)
Q Consensus 237 naSCTTn~Lapvlk~L~d~fGI~~~~mTTiha~Tg~Q~-llD~~~----------------------------------- 280 (453)
||||+|||++|+|+||+++|||+++.|||+|++||+.+ .++..+
T Consensus 135 np~C~tt~~~l~L~pL~~~~~I~~i~v~t~~avSGAG~~~~~el~~q~~~l~~~~~~~~~~p~~~ild~~~~~~~~~~~~ 214 (377)
T 3uw3_A 135 GGNCTVSLMLMALGGLFRENLVDWMTAMTYQAASGAGAQNMRELLAQMGTLNGAVAAQLADPASAILDIDRRVLAAMNGD 214 (377)
T ss_dssp ECCHHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGTCHHHHHHHHHHHHHHHHTTHHHHTCTTSCHHHHHHHHHHHHHST
T ss_pred cCCHHHHHHHHHHHHHHHhCCCCEEEEeeeecccccchhhHHHHHHHHHHhhcccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999999999843 221111
Q ss_pred --ccchhhhhhhhccccCC-----CchhHHH-------Hhhcccc------CCceeEEEEEeeecceeEEEEEEEEccCC
Q 012940 281 --RDLRRARAAALNIVPTS-----TGAAKAV-------SLVMPQL------KGKLNGIALRVPTPNVSVVDLVVNVEKKG 340 (453)
Q Consensus 281 --~d~rr~Raaa~NIIPt~-----tGaakav-------~kVlPeL------~gKisgtavRVPv~~gs~vdltv~lek~~ 340 (453)
..-.+++++++|++|+. +|+++++ .|++..+ ..+|++||+|||+++||+..++++++++
T Consensus 215 ~~~~~~f~~~ia~N~~P~i~~~~~~g~t~EE~ki~~E~~kilg~~~~~~~~~i~Vs~t~vrVPv~rGh~~tv~v~~~~~- 293 (377)
T 3uw3_A 215 AMPTSQFGVPLAGSLIPWIDKDLGNGMSREEWKGGAETNKILGKPAMGEPGSVPVDGLCVRIGAMRCHSQALTIKLKKD- 293 (377)
T ss_dssp TSCCTTTSSCCTBSCBSCCSCBCSSSCBHHHHHHHHHHHHHHTCCCTTSTTCCCEEEECCBCSBSSEEEEEEEEEESSC-
T ss_pred ccccccccccccCceEEeecccccCCCCHHHHHHHHHHHHHhcccccccCCCceEEEEeEEecccceEEEEEEEEeCCC-
Confidence 01245677999999996 4556554 5566553 4579999999999999999999999998
Q ss_pred CCHHHHHHHHHHcccCCCCcceeeccc-------CeEeecCCCCCcceE----EeCCCCceecCCeEEEEEEecC-CCch
Q 012940 341 ITAEDVNAAFRKAAEGPLKGILAVCDV-------PLVSVDFRCSDVSST----IDSSLTMVMGDDMVKVVAWYDN-EWGY 408 (453)
Q Consensus 341 vt~eeI~~al~~aa~~~lkgil~~~~~-------~~VS~Df~~~~~S~i----~D~~~t~v~~~~~vKl~~WYDN-E~GY 408 (453)
++.|||+++|+++. + +|--+.++ |- -.+..|..+..| .|.. +.+.+.+++=-|| -||=
T Consensus 294 ~~~eei~~~l~~~~--p--~V~v~~~~~~~~~~~P~-p~~v~G~n~v~VGrir~d~~-----~~~~l~~~~v~DNL~KGA 363 (377)
T 3uw3_A 294 VPLDEINGILASAN--D--WVKVVPNEREASMRDLS-PAKVTGTLSVPVGRLRKLAM-----GGEYLSAFTVGDQLLWGA 363 (377)
T ss_dssp CCHHHHHHHHHTSC--S--SEEECCSSHHHHHHHSS-HHHHTTSSCEEEEEEEECTT-----CTTEEEEEEEEETTCCCC
T ss_pred CCHHHHHHHHHhCC--C--CEEEecCCcccccCCCC-HHHhcCCCcEEEEEEEECCC-----CCCEEEEEEEehhhhHhH
Confidence 89999999999872 1 22111111 10 013334433222 1211 1245556666787 4677
Q ss_pred hhhHHHHHHHHH
Q 012940 409 SQRVVDLAHLVA 420 (453)
Q Consensus 409 s~r~vdl~~~~~ 420 (453)
|-+.+-.+..|.
T Consensus 364 AgqAvqn~nl~~ 375 (377)
T 3uw3_A 364 AEPLRRMLRILL 375 (377)
T ss_dssp CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 777777777664
No 40
>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A
Probab=100.00 E-value=9.2e-38 Score=320.03 Aligned_cols=295 Identities=14% Similarity=0.108 Sum_probs=209.8
Q ss_pred eeEEEEc-CChhHHHHHH-HHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEE-ECCeEEEEEe
Q 012940 87 LKVAING-FGRIGRNFLR-CWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETIS-VDGKLIKVVS 163 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr-~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~-v~Gk~I~v~~ 163 (453)
|||||+| +|.+|+.++| +|++++++.++++.+... + .|+.+. +.|+.+.+..
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~-------------~------------aG~~~~~~~~~~~~~~~ 55 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTS-------------Q------------IGVPAPNFGKDAGMLHD 55 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESS-------------S------------TTSBCCCSSSCCCBCEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEecc-------------c------------cCcCHHHhCCCceEEEe
Confidence 5899999 9999999999 999987656777666432 1 111111 3333333322
Q ss_pred CCCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCC---CCCCCCeEEeccCccccCcc-CC--eEEec
Q 012940 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA---KGADIPTYVVGVNEKDYDHE-VA--NIVSN 237 (453)
Q Consensus 164 ~~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISaps---~d~dvPtvV~gVN~~~~~~~-~~--~IVSn 237 (453)
..+++. |. ++|+||+|+|.+.+++.+++|+++|+|++||++++ +++++|++|||||++.|+.. ++ ++|||
T Consensus 56 ~~~~~~--~~--~~Dvvf~a~~~~~s~~~~~~~~~~G~k~~VID~ss~fR~~~~~p~~vpevN~~~i~~~~~~~i~~Ian 131 (370)
T 3pzr_A 56 AFDIES--LK--QLDAVITCQGGSYTEKVYPALRQAGWKGYWIDAASTLRMDKEAIITLDPVNLKQILHGIHHGTKTFVG 131 (370)
T ss_dssp TTCHHH--HT--TCSEEEECSCHHHHHHHHHHHHHTTCCCEEEECSSTTTTCTTEEEECHHHHHHHHHHHHHTTCCEEEE
T ss_pred cCChhH--hc--cCCEEEECCChHHHHHHHHHHHHCCCCEEEEeCCchhccCCCCcEEcccCCHHHHhhhhhcCCcEEEc
Confidence 222222 43 79999999999999999999999999889999987 56678999999999999642 12 46999
Q ss_pred CCcchhhhhhHHHHHhhhcCeeEEEEEeeeccccchh-hhcccc------------------------------------
Q 012940 238 ASCTTNCLAPFVKVMDEELGIVKGAMTTTHSYTGDQR-LLDASH------------------------------------ 280 (453)
Q Consensus 238 aSCTTn~Lapvlk~L~d~fGI~~~~mTTiha~Tg~Q~-llD~~~------------------------------------ 280 (453)
|||+|||++|+|+||+++|||+++.|||||++||+.+ .++..+
T Consensus 132 p~C~tt~~~l~L~pL~~~~~I~~i~v~t~~avSGAG~~~~~el~~q~~~~~~~~~~~l~~p~~~ild~~~~~~~~~~~~~ 211 (370)
T 3pzr_A 132 GNCTVSLMLMALGGLYERGLVEWMSAMTYQAASGAGAQNMRELISQMGVINDAVSSELANPASSILDIDKKVAETMRSGS 211 (370)
T ss_dssp CCHHHHHHHHHHHHHHHTTCEEEEEEEEEBCGGGTCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHSTT
T ss_pred CChHHHHHHHHHHHHHHhCCCcEEEEEeEEeccccChhhHHHHHHHHHHhhccccccccccccccccccccccccccccc
Confidence 9999999999999999999999999999999999843 211111
Q ss_pred -ccchhhhhhhhccccCC-----CchhHHH-------Hhhccc--cCCceeEEEEEeeecceeEEEEEEEEccCCCCHHH
Q 012940 281 -RDLRRARAAALNIVPTS-----TGAAKAV-------SLVMPQ--LKGKLNGIALRVPTPNVSVVDLVVNVEKKGITAED 345 (453)
Q Consensus 281 -~d~rr~Raaa~NIIPt~-----tGaakav-------~kVlPe--L~gKisgtavRVPv~~gs~vdltv~lek~~vt~ee 345 (453)
....+++++++|++|+. +|+++++ +|++.. -..++++||+|||+++||+..++++++++ ++.+|
T Consensus 212 ~~~~~f~~~ia~N~~P~i~~~~~~g~t~EE~ki~~E~~kilg~~~~~i~V~~t~vrVPv~rGh~~tv~v~~~~~-~~~~e 290 (370)
T 3pzr_A 212 FPTDNFGVPLAGSLIPWIDVKRDNGQSKEEWKAGVEANKILGLQDSPVPIDGTCVRIGAMRCHSQALTIKLKQN-IPLDE 290 (370)
T ss_dssp SCCTTTSSCCTTSEESCCSCBCTTSCBHHHHHHHHHHHHHTTCTTSCCCEECCCCEESCSSEEEEEEEEEESSC-CCHHH
T ss_pred cccccccccccCceeeeccccccCCCCHHHHHHHHHHHHHhCccCCCceEEEEeEEecccceEEEEEEEEeCCC-CCHHH
Confidence 01235677999999996 3555554 455553 23479999999999999999999999998 89999
Q ss_pred HHHHHHHcccCCCCcceeeccc-------CeEeecCCCCCcceE----EeCCCCceecCCeEEEEEEecC-CCchhhhHH
Q 012940 346 VNAAFRKAAEGPLKGILAVCDV-------PLVSVDFRCSDVSST----IDSSLTMVMGDDMVKVVAWYDN-EWGYSQRVV 413 (453)
Q Consensus 346 I~~al~~aa~~~lkgil~~~~~-------~~VS~Df~~~~~S~i----~D~~~t~v~~~~~vKl~~WYDN-E~GYs~r~v 413 (453)
++++|+++. + +|-=+.+. |- -.+..|..+..| .|.. +++.+.+++=-|| -||=|-+.+
T Consensus 291 i~~~l~~~~--p--~V~v~~~~~~~~~~~P~-p~~v~G~n~v~VGrir~d~~-----~~~~l~~~~v~DNL~KGAAgqAv 360 (370)
T 3pzr_A 291 IEEMIATHN--D--WVKVIPNERDITARELT-PAKVTGTLSVPVGRLRKMAM-----GDDFLNAFTVGDQLLWGAAEPLR 360 (370)
T ss_dssp HHHHHHTSC--S--SEEECCSCHHHHHHHSS-HHHHTTSCCEEEEEEEEETT-----EEEEEEEEEEEETTTTTTHHHHH
T ss_pred HHHHHHhCC--C--CEEEecCCcccccCCCC-HHHhcCCccEEEEEEEECCC-----CCCEEEEEEEehhhhHhHHHHHH
Confidence 999999872 2 22111111 10 013344443222 1211 1234555555788 478888888
Q ss_pred HHHHHHHh
Q 012940 414 DLAHLVAT 421 (453)
Q Consensus 414 dl~~~~~~ 421 (453)
-.+..|.+
T Consensus 361 Qn~Nl~~~ 368 (370)
T 3pzr_A 361 RTLRIILA 368 (370)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 88887755
No 41
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=100.00 E-value=8.4e-36 Score=306.58 Aligned_cols=245 Identities=22% Similarity=0.274 Sum_probs=181.4
Q ss_pred cceeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEc--C-CCChhhhhhhhccccceeecCceEEEecCCeEEECCeEE
Q 012940 84 VAKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN--D-SGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLI 159 (453)
Q Consensus 84 ~m~ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaIn--d-~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I 159 (453)
++++||||+| +|.+|+.++|+|.++ |.++|+.+- . ..+.. +... | +|... ..|..+++.+
T Consensus 17 M~~~kVaIvGAtG~vG~ell~lL~~h--p~~el~~l~aS~~saGk~-~~~~------~-~~~~~------~~~p~~~~~~ 80 (381)
T 3hsk_A 17 MSVKKAGVLGATGSVGQRFILLLSKH--PEFEIHALGASSRSAGKK-YKDA------A-SWKQT------ETLPETEQDI 80 (381)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTC--SSEEEEEEEECTTTTTSB-HHHH------C-CCCCS------SCCCHHHHTC
T ss_pred CCccEEEEECCCChHHHHHHHHHHcC--CCceEEEeeccccccCCC-HHHh------c-ccccc------cccccccccc
Confidence 4478999999 999999999999887 568987773 2 12221 1111 1 11000 0000000112
Q ss_pred EEEeCCCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC-CCCCCCCeEEeccCccccC----------
Q 012940 160 KVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP-AKGADIPTYVVGVNEKDYD---------- 228 (453)
Q Consensus 160 ~v~~~~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap-s~d~dvPtvV~gVN~~~~~---------- 228 (453)
.+ ++-++++ .|. ++|+||+|+|.+.+++.+++++++|++.|.+|+. ++++++|++|++||++.|+
T Consensus 81 ~v-~~~~~~~-~~~--~~Dvvf~alp~~~s~~~~~~~~~~G~~VIDlSa~fR~~~~vplvv~~vn~~~~~l~E~~r~~~~ 156 (381)
T 3hsk_A 81 VV-QECKPEG-NFL--ECDVVFSGLDADVAGDIEKSFVEAGLAVVSNAKNYRREKDVPLVVPIVNPEHIDVVENKVKQAV 156 (381)
T ss_dssp BC-EESSSCT-TGG--GCSEEEECCCHHHHHHHHHHHHHTTCEEEECCSTTTTCTTSCEECTTTCGGGGHHHHHHHHHHH
T ss_pred eE-EeCchhh-hcc--cCCEEEECCChhHHHHHHHHHHhCCCEEEEcCCcccCCCCCcEEecccCHHHcCCHhhhhhhhc
Confidence 22 1122321 354 7999999999999999999999999964444554 3666889999999999886
Q ss_pred ----ccCCeEEecCCcchhhhhhHHHHHhhhcC-eeEEEEEeeeccccchhhhccccccchhhhhhhhccccCCCch-hH
Q 012940 229 ----HEVANIVSNASCTTNCLAPFVKVMDEELG-IVKGAMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGA-AK 302 (453)
Q Consensus 229 ----~~~~~IVSnaSCTTn~Lapvlk~L~d~fG-I~~~~mTTiha~Tg~Q~llD~~~~d~rr~Raaa~NIIPt~tGa-ak 302 (453)
..+.+||+||+|+|+|++++|+||+++|| |+++.|+|+|+|||+++-... ..+.+++|++|+.+|. .|
T Consensus 157 ~~~~i~~~~iIaNPgC~tt~~~laL~PL~~~~glI~~v~v~t~~gvSGAG~~~~~------~~~~~~~N~~Py~~~~e~k 230 (381)
T 3hsk_A 157 SKGGKKPGFIICISNCSTAGLVAPLKPLVEKFGPIDALTTTTLQAISGAGFSPGV------SGMDILDNIVPYISGEEDK 230 (381)
T ss_dssp HTTCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCEEEEEEEEEBCCCC------C------CHHHHTTCCBCCCTTHHHH
T ss_pred ccccccCCcEEECCCcHHHHHHHHHHHHHHhcCCceEEEEEEeeccCCCCccCCc------chhhhhcChhhcccchHHH
Confidence 12357999999999999999999999999 999999999999999872111 1247899999999886 33
Q ss_pred ---HHHhhccccCC-------------ceeEEEEEeeecceeEEEEEEEEcc--CCCCHHHHHHHHHHccc
Q 012940 303 ---AVSLVMPQLKG-------------KLNGIALRVPTPNVSVVDLVVNVEK--KGITAEDVNAAFRKAAE 355 (453)
Q Consensus 303 ---av~kVlPeL~g-------------KisgtavRVPv~~gs~vdltv~lek--~~vt~eeI~~al~~aa~ 355 (453)
|+.|+|+.+++ +++++|+|||+++||++++++++++ + +|.|||+++|+++..
T Consensus 231 ~~~Ei~kiL~~l~~~~~~~~~~~~~~~~v~ft~~rVPv~rG~~~tv~v~l~~~~~-~t~eei~~~l~~~y~ 300 (381)
T 3hsk_A 231 LEWETKKILGGVNAEGTEFVPIPESEMKVSAQCNRVPVIDGHTECISLRFANRPA-PSVEDVKQCLREYEC 300 (381)
T ss_dssp HHHHHHHHTCEECTTSSSEECCCTTTCEEEEECCBCSCSSCCEEEEEEEESSSSC-CCHHHHHHHHHHCBC
T ss_pred HHHHHHHHhhhcccccccccccccCCCceEEEEEEeceeccEEEEEEEEeCCCCC-CCHHHHHHHHHHhhc
Confidence 46788887765 8999999999999999999999998 7 899999999999864
No 42
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=100.00 E-value=4.7e-35 Score=296.65 Aligned_cols=295 Identities=15% Similarity=0.130 Sum_probs=209.4
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeCC
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~~ 165 (453)
+||+|.| +|.+|+.++|.|.++ |+++++++-...+.+..-..+ ...|..|.+. ..+.+....
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~~--p~~el~~l~s~~~~~saGk~~--~~~~p~~~~~-------------~~~~v~~~~ 67 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNRH--PHMNITALTVSAQSNDAGKLI--SDLHPQLKGI-------------VELPLQPMS 67 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHC--TTEEEEEEEEETTCTTTTSBH--HHHCGGGTTT-------------CCCBEEEES
T ss_pred eEEEEECCCChHHHHHHHHHHhC--CCCcEEEEEecCchhhcCCch--HHhCccccCc-------------cceeEeccC
Confidence 7999999 999999999999886 568988874321000000000 1111112110 012221100
Q ss_pred CCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCC-C-CCCCC---------------e---EEeccCcc
Q 012940 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA-K-GADIP---------------T---YVVGVNEK 225 (453)
Q Consensus 166 dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISaps-~-d~dvP---------------t---vV~gVN~~ 225 (453)
++++ |. .++|+||+|+|.+.+++.+++|+++|+|.|.+|++. + ++++| + .|||+|.+
T Consensus 68 ~~~~--~~-~~~Dvvf~a~p~~~s~~~~~~~~~~g~~vIDlSa~fR~~d~~v~~~wy~~~~~~p~l~~~~vyglPEvn~~ 144 (337)
T 3dr3_A 68 DISE--FS-PGVDVVFLATAHEVSHDLAPQFLEAGCVVFDLSGAFRVNDATFYEKYYGFTHQYPELLEQAAYGLAEWCGN 144 (337)
T ss_dssp SGGG--TC-TTCSEEEECSCHHHHHHHHHHHHHTTCEEEECSSTTSSSCHHHHHHHTSSCCSCHHHHHHCEECCTTTCCH
T ss_pred CHHH--Hh-cCCCEEEECCChHHHHHHHHHHHHCCCEEEEcCCccccCCcccchhhccccccChhhhcceEEEccccCHH
Confidence 2332 31 279999999999999999999999999665566663 3 33343 2 35566999
Q ss_pred ccCccCCeEEecCCcchhhhhhHHHHHhh--hcCeeEE-EEEeeeccccch-hhhccccccchhhhhhhhccccCCCchh
Q 012940 226 DYDHEVANIVSNASCTTNCLAPFVKVMDE--ELGIVKG-AMTTTHSYTGDQ-RLLDASHRDLRRARAAALNIVPTSTGAA 301 (453)
Q Consensus 226 ~~~~~~~~IVSnaSCTTn~Lapvlk~L~d--~fGI~~~-~mTTiha~Tg~Q-~llD~~~~d~rr~Raaa~NIIPt~tGaa 301 (453)
.+.. .+|||||||+|+|++++|+||++ .|+++++ .|+|+|+|||++ +++|..|.+.| |++|+.++.
T Consensus 145 ~i~~--~~iIanPgC~tt~~~l~L~PL~~~g~~~~~~i~~v~t~~g~SGaG~~~~~~~~~~~~-------n~~py~~~~- 214 (337)
T 3dr3_A 145 KLKE--ANLIAVPGCYPTAAQLALKPLIDADLLDLNQWPVINATSGVSGAGRKAAISNSFCEV-------SLQPYGVFT- 214 (337)
T ss_dssp HHHT--CSEEECCCHHHHHHHHHHHHHHHTTCBCTTSCCEEEEEECGGGGCSCCCSTTSGGGC-------SEEECSTTT-
T ss_pred HhCC--CCEEecCChHHHHHHHHHHHHHHcCccCCCceEEEEEeeccccCCcccccccccccc-------ceEccCccc-
Confidence 9975 58999999999999999999998 6999999 999999999996 56676665543 999998875
Q ss_pred HHHHhhccccCC----ceeEEEEEeeecceeEEEEEEEEccCCCCHHHHHHHHHHccc-CCCCcceeecccCeEeecCCC
Q 012940 302 KAVSLVMPQLKG----KLNGIALRVPTPNVSVVDLVVNVEKKGITAEDVNAAFRKAAE-GPLKGILAVCDVPLVSVDFRC 376 (453)
Q Consensus 302 kav~kVlPeL~g----KisgtavRVPv~~gs~vdltv~lek~~vt~eeI~~al~~aa~-~~lkgil~~~~~~~VS~Df~~ 376 (453)
.+.+||+++ +++++++|||+++||+++++++++++ +|.|||+++|+++-+ .++--++.-.+ |-. .+..|
T Consensus 215 ---h~h~Pei~~~l~~~v~ft~~rvPv~rG~~~ti~~~l~~~-~t~eev~~~l~~~Y~~~p~V~v~~~~~-P~~-~~v~g 288 (337)
T 3dr3_A 215 ---HRHQPEIATHLGADVIFTPHLGNFPRGILETITCRLKSG-VTQAQVAQALQQAYAHKPLVRLYDKGV-PAL-KNVVG 288 (337)
T ss_dssp ---CTHHHHHHHHHTSCCEEEEEEESSSSCEEEEEEEEBCTT-CCHHHHHHHHHHHHTTCTTEEECSSSC-CCG-GGTTT
T ss_pred ---ceechhHHhhhcCCEEEEEEEecccccEEEEEEEEECCC-CCHHHHHHHHHHHhCCCCCEEECCCCC-CCH-HHhCC
Confidence 456777765 89999999999999999999999998 899999999998632 23322222111 221 25555
Q ss_pred CCcceEEeCCCCceecCCeEEEEEEecC-CCchhhhHHHHHHHHHhc
Q 012940 377 SDVSSTIDSSLTMVMGDDMVKVVAWYDN-EWGYSQRVVDLAHLVATK 422 (453)
Q Consensus 377 ~~~S~i~D~~~t~v~~~~~vKl~~WYDN-E~GYs~r~vdl~~~~~~~ 422 (453)
..+..|-- ..+++.+.+++..|| -+|=|-+-|-.+++|-..
T Consensus 289 tn~~~ig~-----~~~~~~l~~~~~~DNL~KGAAgqAVQ~~nlm~g~ 330 (337)
T 3dr3_A 289 LPFCDIGF-----AVQGEHLIIVATEDNLLKGAAAQAVQCANIRFGY 330 (337)
T ss_dssp SSCEEEEE-----EEETTEEEEEEEECTTTTTTHHHHHHHHHHHHTC
T ss_pred CCcEEEEE-----EEeCCEEEEEEEechHHHHHHHHHHHHHHHHhCC
Confidence 55443311 111467888999999 689999999999888764
No 43
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=100.00 E-value=1.2e-32 Score=280.54 Aligned_cols=305 Identities=13% Similarity=0.045 Sum_probs=216.1
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCC-CC--CceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEE
Q 012940 86 KLKVAING-FGRIGRNFLRCWHGRK-DS--PLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKV 161 (453)
Q Consensus 86 ~ikVaInG-fGrIGR~vlr~l~~r~-~~--~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v 161 (453)
++||+|+| +|+||+.++|.|.+++ ++ .++|++++...+... ++++.|++|.+... +.+
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk-----~~~~~~~~l~~~~~-------------~~~ 70 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGS-----TLGEHHPHLTPLAH-------------RVV 70 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTS-----BGGGTCTTCGGGTT-------------CBC
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCC-----chhhhcccccccce-------------eee
Confidence 47999999 9999999999999774 22 689999975322111 24566666543101 111
Q ss_pred EeCCCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCC-CCC-C-------------CCeEEecc--Cc
Q 012940 162 VSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA-KGA-D-------------IPTYVVGV--NE 224 (453)
Q Consensus 162 ~~~~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISaps-~d~-d-------------vPtvV~gV--N~ 224 (453)
.. .+++ .|. ++|+||+|+|.+.+++.++.+ ++|++.|.+|++. +++ + .|..|||+ |.
T Consensus 71 ~~-~~~~--~~~--~~DvVf~alg~~~s~~~~~~~-~~G~~vIDlSa~~R~~~~~~~~~~y~~~h~~~~vyglPEv~~n~ 144 (352)
T 2nqt_A 71 EP-TEAA--VLG--GHDAVFLALPHGHSAVLAQQL-SPETLIIDCGADFRLTDAAVWERFYGSSHAGSWPYGLPELPGAR 144 (352)
T ss_dssp EE-CCHH--HHT--TCSEEEECCTTSCCHHHHHHS-CTTSEEEECSSTTTCSCHHHHHHHHSSCCCCCCCBSCTTSTTHH
T ss_pred cc-CCHH--Hhc--CCCEEEECCCCcchHHHHHHH-hCCCEEEEECCCccCCcchhhhhhccccCCCCeeEEecccccCH
Confidence 11 1222 264 799999999999999999999 9998655567764 333 3 28889999 99
Q ss_pred cccCccCCeEEecCCcchhhhhhHHHHHhhhcCee-EEEEEeeeccccc-hhhhccccccchhhhhhhhcccc-CCCc--
Q 012940 225 KDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIV-KGAMTTTHSYTGD-QRLLDASHRDLRRARAAALNIVP-TSTG-- 299 (453)
Q Consensus 225 ~~~~~~~~~IVSnaSCTTn~Lapvlk~L~d~fGI~-~~~mTTiha~Tg~-Q~llD~~~~d~rr~Raaa~NIIP-t~tG-- 299 (453)
+.+.. .+|||||+|+|+|++++|+||+++++|+ ++.|+|+|++||+ ++.++..|.+.++.+..++|++| +..-
T Consensus 145 ~~i~~--~~iIanPgC~tt~~~lal~PL~~~~~i~~~i~v~t~~g~SGaG~~~~~~~~~~~~~~~~~ay~~~~~h~h~pE 222 (352)
T 2nqt_A 145 DQLRG--TRRIAVPGCYPTAALLALFPALAADLIEPAVTVVAVSGTSGAGRAATTDLLGAEVIGSARAYNIAGVHRHTPE 222 (352)
T ss_dssp HHHTT--CSEEECCCHHHHHHHHHHHHHHHTTCSCSEEEEEEEECGGGGCSSCCGGGSHHHHTTCCEECSTTTTSTTHHH
T ss_pred HHHhc--CCEEEcCCHHHHHHHHHHHHHHHcCCCcceEEEEEEeccccCCccccccccHHHHhhhcccccCCCcceecHH
Confidence 99974 5899999999999999999999999999 9999999999999 77888777777888888999998 4211
Q ss_pred hhHHHHhhccccCCceeEEEEEeeecceeEEEEEEEEccCCCCHHHHHHHHHHcccC-CCCcceeecccCeEeecCCCCC
Q 012940 300 AAKAVSLVMPQLKGKLNGIALRVPTPNVSVVDLVVNVEKKGITAEDVNAAFRKAAEG-PLKGILAVCDVPLVSVDFRCSD 378 (453)
Q Consensus 300 aakav~kVlPeL~gKisgtavRVPv~~gs~vdltv~lek~~vt~eeI~~al~~aa~~-~lkgil~~~~~~~VS~Df~~~~ 378 (453)
-..+++|++. .+++++++|+|||+++||+++++++++++ .|||+++|+++-++ ++--++.-.+-|- -.+..|..
T Consensus 223 i~~e~~ki~~-~~~~v~ft~~rvP~~rG~~~ti~~~l~~~---~~ei~~~~~~~y~~~~~V~v~~~~~~p~-~~~v~g~n 297 (352)
T 2nqt_A 223 IAQGLRAVTD-RDVSVSFTPVLIPASRGILATCTARTRSP---LSQLRAAYEKAYHAEPFIYLMPEGQLPR-TGAVIGSN 297 (352)
T ss_dssp HHHHHHTTCS-SCCEEEEEEEECSCSSCEEEEEEEECCSC---HHHHHHHHHHHHTTCTTEEECCTTCCCC-GGGTTTSS
T ss_pred HHHHHHHHhC-CCCCEEEEEEEEccccEEEEEEEEEECCC---HHHHHHHHHHhhCCCCCEEEeCCCCCcC-hHHhcCCc
Confidence 1123355554 36789999999999999999999999874 89999999986322 2221221000111 11444444
Q ss_pred cceEEeCCCCceecCCeEEEEEEecCC-CchhhhHHHHHHHHHhcCC
Q 012940 379 VSSTIDSSLTMVMGDDMVKVVAWYDNE-WGYSQRVVDLAHLVATKWP 424 (453)
Q Consensus 379 ~S~i~D~~~t~v~~~~~vKl~~WYDNE-~GYs~r~vdl~~~~~~~~~ 424 (453)
+..|- ...-...+.+.+++=-||= +|=|-+-|-.+++|....+
T Consensus 298 ~~~ig---~~~d~~~~~l~~~~~~DNL~KGAAg~AVQ~~nl~~g~~e 341 (352)
T 2nqt_A 298 AAHIA---VAVDEDAQTFVAIAAIDNLVKGTAGAAVQSMNLALGWPE 341 (352)
T ss_dssp CEEEE---EEEETTTTEEEEEEEECTTTTTTHHHHHHHHHHHHTCCT
T ss_pred EEEEE---EEEeCCCCEEEEEEEEcchhHhHHHHHHHHHHHHhCCCc
Confidence 33331 0000023456677777984 6888888888888876433
No 44
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=99.94 E-value=3.3e-28 Score=247.73 Aligned_cols=293 Identities=12% Similarity=0.089 Sum_probs=198.9
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeC
Q 012940 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (453)
Q Consensus 86 ~ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~ 164 (453)
++||||+| +|.+|+.++|+|.++ |.++|+.+......- -+|+..|..|. +.+.+ ++
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~h--P~~el~~l~S~~~aG-----~~~~~~~p~~~---------------~~l~~-~~ 69 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKNH--PEAKITYLSSRTYAG-----KKLEEIFPSTL---------------ENSIL-SE 69 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHC--TTEEEEEEECSTTTT-----SBHHHHCGGGC---------------CCCBC-BC
T ss_pred eeEEEEECCCCHHHHHHHHHHHcC--CCcEEEEEeCccccc-----CChHHhChhhc---------------cCceE-Ee
Confidence 58999999 999999999999988 579999987531110 11234444333 11222 11
Q ss_pred CCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCC---CCC-CC-----------------CeEEeccC
Q 012940 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA---KGA-DI-----------------PTYVVGVN 223 (453)
Q Consensus 165 ~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISaps---~d~-dv-----------------PtvV~gVN 223 (453)
.+++++ |. ++|+||+|+|...+++.++++ +|+ +||++++ +++ ++ |..+||+|
T Consensus 70 ~~~~~~-~~--~~Dvvf~alp~~~s~~~~~~~--~g~--~VIDlSsdfRl~~~~~y~~~y~~~h~~p~~~~~~yglPE~n 142 (351)
T 1vkn_A 70 FDPEKV-SK--NCDVLFTALPAGASYDLVREL--KGV--KIIDLGADFRFDDPGVYREWYGKELSGYENIKRVYGLPELH 142 (351)
T ss_dssp CCHHHH-HH--HCSEEEECCSTTHHHHHHTTC--CSC--EEEESSSTTTCSSHHHHHHHHCCCCTTGGGCCEEECCHHHH
T ss_pred CCHHHh-hc--CCCEEEECCCcHHHHHHHHHh--CCC--EEEECChhhhCCchhhhhhhcCCCCCchhhcCCceECCccC
Confidence 223222 23 699999999999999999988 788 6887775 342 32 78888899
Q ss_pred ccccCccCCeEEecCCcchhhhhhHHHHHhhhcCee--EEEEEeeeccccchh-hhccccccchhhhhhhhccccCCCch
Q 012940 224 EKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGIV--KGAMTTTHSYTGDQR-LLDASHRDLRRARAAALNIVPTSTGA 300 (453)
Q Consensus 224 ~~~~~~~~~~IVSnaSCTTn~Lapvlk~L~d~fGI~--~~~mTTiha~Tg~Q~-llD~~~~d~rr~Raaa~NIIPt~tGa 300 (453)
.+.+.. .+||+||+|+|+++++.|+||+++++|+ ++.++|+|++||+++ ..+..+. ..+..|+.|...+.
T Consensus 143 ~e~i~~--a~iIANPgC~~t~~~laL~PL~~~~~i~~~~iiv~t~sgvSGAG~~~~~~~~~-----~e~~~n~~~y~~~~ 215 (351)
T 1vkn_A 143 REEIKN--AQVVGNPGCYPTSVILALAPALKHNLVDPETILVDAKSGVSGAGRKEKVDYLF-----SEVNESLRPYNVAK 215 (351)
T ss_dssp HHHHTT--CSEEECCCHHHHHHHHHHHHHHHTTCSCCSEEEEEEEEEGGGGCSCCSGGGBH-----HHHTTCCEECSCSC
T ss_pred HHHhcc--CCEEeCCChHHHHHHHHHHHHHHcCCCCCCEEEEEEEeeccccCcccccccch-----hHHhcccccCCccc
Confidence 999975 4799999999999999999999999999 999999999999976 4444432 23456777766542
Q ss_pred hH-------HHHhhccccCCceeEEEEEeeecceeEEEEEEEEccCCCCHHHHHHHHHHcccC-CCCcceeecccCeEee
Q 012940 301 AK-------AVSLVMPQLKGKLNGIALRVPTPNVSVVDLVVNVEKKGITAEDVNAAFRKAAEG-PLKGILAVCDVPLVSV 372 (453)
Q Consensus 301 ak-------av~kVlPeL~gKisgtavRVPv~~gs~vdltv~lek~~vt~eeI~~al~~aa~~-~lkgil~~~~~~~VS~ 372 (453)
-+ ++++++.. ..+++.+|+|||+++||++.++++++ ++.|||+++|+++-++ ++--++.-.+-|-. .
T Consensus 216 h~h~pEi~~el~~i~~~-~~~v~ftp~rvPv~rG~~~tv~v~l~---~~~eei~~~l~~~Y~~~pfV~v~~~~~~P~~-~ 290 (351)
T 1vkn_A 216 HRHVPEMEQELGKISGK-KVNVVFTPHLVPMTRGILSTIYVKTD---KSLEEIHEAYLEFYKNEPFVHVLPMGIYPST-K 290 (351)
T ss_dssp CTHHHHHHHHHHHHHTS-CCEEEEEEEEESSSSCEEEEEEEECS---SCHHHHHHHHHHHHTTCTTEEECCTTCCCCG-G
T ss_pred cccHHHHHHHHHHhhCC-CCCEEEEEEEeccccEEEEEEEEEEc---CCHHHHHHHHHHhhCCCCCEEEeCCCCCcCh-H
Confidence 22 33444432 34799999999999999999999997 4899999999975432 22112110001110 1
Q ss_pred cCCCCCcceEEeCCCCcee-cCCeEEEEEEecCC-CchhhhHHHHHHHHHhcCC
Q 012940 373 DFRCSDVSSTIDSSLTMVM-GDDMVKVVAWYDNE-WGYSQRVVDLAHLVATKWP 424 (453)
Q Consensus 373 Df~~~~~S~i~D~~~t~v~-~~~~vKl~~WYDNE-~GYs~r~vdl~~~~~~~~~ 424 (453)
+..|..+..| +. ... ..+.+.+++=-||= +|=|-+-|-.+++|....+
T Consensus 291 ~v~gtn~~~I---g~-~~d~~~~~l~~~s~~DNL~KGAAgqAVQn~nlm~G~~E 340 (351)
T 1vkn_A 291 WCYGSNHVFI---GM-QMEERTNTLILMSAIDNLVKGASGQAVQNMNIMFGLDE 340 (351)
T ss_dssp GGTTSSCEEE---EE-EEETTTTEEEEEEEECTTTTTTHHHHHHHHHHHTTCCT
T ss_pred HhcCCceEEE---EE-EEcCCCCEEEEEEEcccHHHhHHHHHHHHHHHHhCCCc
Confidence 2333333322 10 000 12345555558984 6888888888888766433
No 45
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=98.66 E-value=3.6e-08 Score=98.53 Aligned_cols=154 Identities=22% Similarity=0.192 Sum_probs=96.2
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhh-hhhhhccccceeecCceEEEecCCeEEECCeEEEEEeC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKN-ASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~-~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~ 164 (453)
++||||+|+|.||+.+++.+..+ .+.+++++|-|. +++. ...+.+ .+|. ... . ++ +
T Consensus 4 ~irVaIIG~G~iG~~~~~~l~~~-~~~~elvav~d~-~~~~~~~~~a~---~~g~---~~~--~------~~----~--- 60 (312)
T 1nvm_B 4 KLKVAIIGSGNIGTDLMIKVLRN-AKYLEMGAMVGI-DAASDGLARAQ---RMGV---TTT--Y------AG----V--- 60 (312)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH-CSSEEEEEEECS-CTTCHHHHHHH---HTTC---CEE--S------SH----H---
T ss_pred CCEEEEEcCcHHHHHHHHHHHhh-CcCeEEEEEEeC-ChhhhHHHHHH---HcCC---Ccc--c------CC----H---
Confidence 58999999999999999999762 256999999886 2222 101110 0110 000 0 00 0
Q ss_pred CCC-CCCCccccCccEEEcCCCCCCChhhHHHHHHc--CCCEEEEeCCCCCCCCCeEEeccCccccCc-cCCeEEecCCc
Q 012940 165 RDP-LQLPWAELGIDIVIEGTGVFVDGPGAGKHIQA--GAKKVIITAPAKGADIPTYVVGVNEKDYDH-EVANIVSNASC 240 (453)
Q Consensus 165 ~dp-~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~a--GAkkVIISaps~d~dvPtvV~gVN~~~~~~-~~~~IVSnaSC 240 (453)
.+. ++.+| .++|+||+|||.....+.+..++++ |. .|+.-.|.. -.|..++++|.+.+.. ...++++++.|
T Consensus 61 e~ll~~~~~--~~iDvV~~atp~~~h~~~a~~al~a~~Gk-~Vi~ekp~~--~g~~~~p~v~~~~~~~~~~~~lva~~g~ 135 (312)
T 1nvm_B 61 EGLIKLPEF--ADIDFVFDATSASAHVQNEALLRQAKPGI-RLIDLTPAA--IGPYCVPVVNLEEHLGKLNVNMVTCGGQ 135 (312)
T ss_dssp HHHHHSGGG--GGEEEEEECSCHHHHHHHHHHHHHHCTTC-EEEECSTTC--SSCBCCHHHHTTTTTTCSEEECCCHHHH
T ss_pred HHHHhccCC--CCCcEEEECCChHHHHHHHHHHHHhCCCC-EEEEcCccc--ccccccCccCHHHHHhccCCcEEEeCCc
Confidence 000 11123 2799999999998889999999999 96 444444432 1477778888877632 12467877777
Q ss_pred chhhhhhHHHHHhhhcCeeEE-EEEeeeccc
Q 012940 241 TTNCLAPFVKVMDEELGIVKG-AMTTTHSYT 270 (453)
Q Consensus 241 TTn~Lapvlk~L~d~fGI~~~-~mTTiha~T 270 (453)
.+ .|++..+.+.|...-. .+.++++.+
T Consensus 136 ~~---ipl~~a~~~~~~~~~~~iv~~i~sgs 163 (312)
T 1nvm_B 136 AT---IPMVAAVSRVAKVHYAEIVASISSKS 163 (312)
T ss_dssp HH---HHHHHHHHTTSCEEEEEEEEEEEGGG
T ss_pred cc---chHHHHhhhhccchhHhHhhhhhccc
Confidence 54 5666666666665432 567777766
No 46
>3b1j_C CP12; alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_C*
Probab=97.97 E-value=2e-06 Score=55.79 Aligned_cols=23 Identities=30% Similarity=0.810 Sum_probs=20.7
Q ss_pred CCChhhhhhccCCCCcccccccC
Q 012940 431 SGDPLEDFCQTNPADEECKVYEA 453 (453)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~ 453 (453)
..+|||.||..||++.|||+||.
T Consensus 3 ~~t~lE~yC~enPea~Ecr~yd~ 25 (26)
T 3b1j_C 3 TEPFFGDYCSENPDAAECLIYDD 25 (26)
T ss_dssp -CTTHHHHHHHCTTSTTTCCCCC
T ss_pred cccHHHHHHHHCCCcHHHHhhcc
Confidence 46899999999999999999984
No 47
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=97.63 E-value=5.1e-05 Score=75.41 Aligned_cols=89 Identities=19% Similarity=0.224 Sum_probs=62.9
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeCC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~~ 165 (453)
++||||+|+|++|+.+++.+... ++++++++-|....+.+ . -| +.++ .
T Consensus 3 ~irV~IiG~G~mG~~~~~~l~~~--~~~elvav~d~~~~~~~--------------------~------~g--v~~~--~ 50 (320)
T 1f06_A 3 NIRVAIVGYGNLGRSVEKLIAKQ--PDMDLVGIFSRRATLDT--------------------K------TP--VFDV--A 50 (320)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTC--SSEEEEEEEESSSCCSS--------------------S------SC--EEEG--G
T ss_pred CCEEEEEeecHHHHHHHHHHhcC--CCCEEEEEEcCCHHHhh--------------------c------CC--Ccee--C
Confidence 68999999999999999998764 46999999875211100 0 01 1221 2
Q ss_pred CCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCC
Q 012940 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (453)
Q Consensus 166 dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISaps 210 (453)
+.+++- .++|+|++||+.....+.+..++++|. .||++.|.
T Consensus 51 d~~~ll---~~~DvViiatp~~~h~~~~~~al~aG~-~Vv~ekp~ 91 (320)
T 1f06_A 51 DVDKHA---DDVDVLFLCMGSATDIPEQAPKFAQFA-CTVDTYDN 91 (320)
T ss_dssp GGGGTT---TTCSEEEECSCTTTHHHHHHHHHTTTS-EEECCCCC
T ss_pred CHHHHh---cCCCEEEEcCCcHHHHHHHHHHHHCCC-EEEECCCC
Confidence 333332 268999999999888888999999995 67776653
No 48
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=97.44 E-value=0.00011 Score=72.50 Aligned_cols=87 Identities=20% Similarity=0.213 Sum_probs=59.1
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeCC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~~ 165 (453)
++||||+|+|+||+.+++.+... ++++|++|-|. +++.+.. +|. ++..+ .
T Consensus 9 ~irv~IIG~G~iG~~~~~~l~~~--~~~elvav~d~-~~~~~~~-------~g~------------------~~~~~--~ 58 (304)
T 3bio_A 9 KIRAAIVGYGNIGRYALQALREA--PDFEIAGIVRR-NPAEVPF-------ELQ------------------PFRVV--S 58 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHC--TTEEEEEEECC---------------CCT------------------TSCEE--S
T ss_pred CCEEEEECChHHHHHHHHHHhcC--CCCEEEEEEcC-CHHHHHH-------cCC------------------CcCCH--H
Confidence 58999999999999999998864 56999998875 2221100 110 00011 2
Q ss_pred CCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEe
Q 012940 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIIT 207 (453)
Q Consensus 166 dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIIS 207 (453)
+..+. .++|+|+.||+.....+.+..++++|. .||..
T Consensus 59 ~l~~~----~~~DvViiatp~~~h~~~~~~al~aG~-~Vi~e 95 (304)
T 3bio_A 59 DIEQL----ESVDVALVCSPSREVERTALEILKKGI-CTADS 95 (304)
T ss_dssp SGGGS----SSCCEEEECSCHHHHHHHHHHHHTTTC-EEEEC
T ss_pred HHHhC----CCCCEEEECCCchhhHHHHHHHHHcCC-eEEEC
Confidence 22222 269999999999999999999999985 55553
No 49
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=97.43 E-value=0.00023 Score=70.15 Aligned_cols=94 Identities=23% Similarity=0.262 Sum_probs=64.8
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeC
Q 012940 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (453)
Q Consensus 85 m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~ 164 (453)
|++||||+|+|.||+..++.+... ++++|++|-|. +++.+..+.+ .+|. + .
T Consensus 2 m~~~vgiiG~G~~g~~~~~~l~~~--~~~~l~av~d~-~~~~~~~~~~---~~~~------------------~--~--- 52 (331)
T 4hkt_A 2 MTVRFGLLGAGRIGKVHAKAVSGN--ADARLVAVADA-FPAAAEAIAG---AYGC------------------E--V--- 52 (331)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHC--TTEEEEEEECS-SHHHHHHHHH---HTTC------------------E--E---
T ss_pred CceEEEEECCCHHHHHHHHHHhhC--CCcEEEEEECC-CHHHHHHHHH---HhCC------------------C--c---
Confidence 779999999999999999998875 46999999886 4443322221 0100 0 0
Q ss_pred CCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 012940 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 165 ~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap 209 (453)
.+++++ ..+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 53 ~~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP 95 (331)
T 4hkt_A 53 RTIDAI-EAAADIDAVVICTPTDTHADLIERFARAG-KAIFCEKP 95 (331)
T ss_dssp CCHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred CCHHHH-hcCCCCCEEEEeCCchhHHHHHHHHHHcC-CcEEEecC
Confidence 111111 11126899999999999999999999999 56777655
No 50
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=97.42 E-value=0.00017 Score=71.29 Aligned_cols=98 Identities=19% Similarity=0.205 Sum_probs=65.3
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeC
Q 012940 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (453)
Q Consensus 85 m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~ 164 (453)
|++||||+|+|.||+.+++.+......+++|++|-|. +++....+.+ .||. . .++
T Consensus 1 M~~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~-~~~~a~~~a~---~~~~---~----------------~~~-- 55 (334)
T 3ohs_X 1 MALRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAAR-DLSRAKEFAQ---KHDI---P----------------KAY-- 55 (334)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECS-SHHHHHHHHH---HHTC---S----------------CEE--
T ss_pred CccEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcC-CHHHHHHHHH---HcCC---C----------------ccc--
Confidence 6799999999999999999887543235799999886 4443322221 1110 0 000
Q ss_pred CCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 012940 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 165 ~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap 209 (453)
.+.+++- .+.++|+|+-||+.....+.+..++++| |.|++--|
T Consensus 56 ~~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~~G-khVl~EKP 98 (334)
T 3ohs_X 56 GSYEELA-KDPNVEVAYVGTQHPQHKAAVMLCLAAG-KAVLCEKP 98 (334)
T ss_dssp SSHHHHH-HCTTCCEEEECCCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred CCHHHHh-cCCCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEECC
Confidence 1111110 1126899999999999999999999999 57887655
No 51
>3qv1_G CP12 protein; rossman fold, calvin cycle, NAD, chloroplast, oxidoreductase binding complex; HET: NAD; 2.00A {Arabidopsis thaliana} PDB: 3rvd_I*
Probab=97.41 E-value=3.7e-05 Score=62.78 Aligned_cols=23 Identities=43% Similarity=1.184 Sum_probs=20.3
Q ss_pred CCChhhhhhccCCCCcccccccC
Q 012940 431 SGDPLEDFCQTNPADEECKVYEA 453 (453)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~ 453 (453)
..+|||.||..||+++|||+||+
T Consensus 60 ~~t~lE~yC~~nPea~ECr~Ydd 82 (82)
T 3qv1_G 60 GSDPLEEYCKDNPETNECRTYDN 82 (82)
T ss_dssp --CHHHHHHHHCTTSTTTCCCCC
T ss_pred CCChHHHHHHHCCCchHhhhcCC
Confidence 68999999999999999999985
No 52
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=97.40 E-value=0.00019 Score=71.23 Aligned_cols=96 Identities=20% Similarity=0.266 Sum_probs=64.8
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeC
Q 012940 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (453)
Q Consensus 85 m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~ 164 (453)
|++||||+|+|.||+..++.|... +++++++|-|. +++.+..+.+ .+|. . .++
T Consensus 1 M~~rvgiIG~G~~g~~~~~~l~~~--~~~~l~av~d~-~~~~~~~~~~---~~~~---~----------------~~~-- 53 (344)
T 3ezy_A 1 MSLRIGVIGLGRIGTIHAENLKMI--DDAILYAISDV-REDRLREMKE---KLGV---E----------------KAY-- 53 (344)
T ss_dssp -CEEEEEECCSHHHHHHHHHGGGS--TTEEEEEEECS-CHHHHHHHHH---HHTC---S----------------EEE--
T ss_pred CeeEEEEEcCCHHHHHHHHHHHhC--CCcEEEEEECC-CHHHHHHHHH---HhCC---C----------------cee--
Confidence 678999999999999999998764 56999999886 4443322221 0110 0 011
Q ss_pred CCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 012940 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 165 ~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap 209 (453)
.+.+++ ..+.++|+|+-||+.....+.+..++++| |.|++--|
T Consensus 54 ~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP 96 (344)
T 3ezy_A 54 KDPHEL-IEDPNVDAVLVCSSTNTHSELVIACAKAK-KHVFCEKP 96 (344)
T ss_dssp SSHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESC
T ss_pred CCHHHH-hcCCCCCEEEEcCCCcchHHHHHHHHhcC-CeEEEECC
Confidence 112111 11126899999999998889999999999 56777665
No 53
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=97.35 E-value=0.0002 Score=72.20 Aligned_cols=87 Identities=21% Similarity=0.234 Sum_probs=57.7
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCC------CCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEE
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKD------SPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLI 159 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~------~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I 159 (453)
++||||.|+|.||+.+++.+.++.. .+++|++|-+. +++.. .+ + +..
T Consensus 3 ~irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~-~~~~~---------~~-~--------------~~~-- 55 (332)
T 2ejw_A 3 ALKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVR-DPRKP---------RA-I--------------PQE-- 55 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECS-CTTSC---------CS-S--------------CGG--
T ss_pred eeEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEEC-CHHHh---------hc-c--------------Ccc--
Confidence 5899999999999999999987531 04899999875 11100 00 0 000
Q ss_pred EEEeCCCCCCCCccccCccEEEcCCCCC-CChhhHHHHHHcCCCEEEE
Q 012940 160 KVVSNRDPLQLPWAELGIDIVIEGTGVF-VDGPGAGKHIQAGAKKVII 206 (453)
Q Consensus 160 ~v~~~~dp~~l~W~~~gvDiVie~TG~f-~s~e~a~~hl~aGAkkVII 206 (453)
.++ .+++++- ++|+|++|||.. ...+.+.+++++|. .||.
T Consensus 56 ~~~--~d~~~ll----~iDvVve~t~~~~~a~~~~~~AL~aGK-hVVt 96 (332)
T 2ejw_A 56 LLR--AEPFDLL----EADLVVEAMGGVEAPLRLVLPALEAGI-PLIT 96 (332)
T ss_dssp GEE--SSCCCCT----TCSEEEECCCCSHHHHHHHHHHHHTTC-CEEE
T ss_pred ccc--CCHHHHh----CCCEEEECCCCcHHHHHHHHHHHHcCC-eEEE
Confidence 011 2455543 689999999976 34578888999995 4444
No 54
>2lj9_A CP12 domain-containing protein 2; helix, protein binding, intrinsically disordered protein; NMR {Arabidopsis thaliana}
Probab=97.34 E-value=5.2e-05 Score=63.91 Aligned_cols=22 Identities=45% Similarity=1.232 Sum_probs=21.0
Q ss_pred CChhhhhhccCCCCcccccccC
Q 012940 432 GDPLEDFCQTNPADEECKVYEA 453 (453)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~ 453 (453)
.+|||.||..||+++||||||+
T Consensus 78 ~t~lE~yCdeNPea~ECrvYDd 99 (99)
T 2lj9_A 78 SDPLEEYCKDNPETNECRTYDN 99 (99)
T ss_dssp CCHHHHHHHHCTTTTSTTTSCC
T ss_pred CChHHHHHHHCCCchHHhhccC
Confidence 7999999999999999999985
No 55
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=97.29 E-value=0.00039 Score=68.92 Aligned_cols=98 Identities=21% Similarity=0.263 Sum_probs=65.6
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeC
Q 012940 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (453)
Q Consensus 85 m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~ 164 (453)
|++||||+|+|.||+..++.+..+ .++++|++|-|. +.+.+..+.+ .+|. . ..++
T Consensus 1 M~~rigiIG~G~~g~~~~~~l~~~-~~~~~l~av~d~-~~~~~~~~~~---~~g~---~---------------~~~~-- 55 (344)
T 3mz0_A 1 MSLRIGVIGTGAIGKEHINRITNK-LSGAEIVAVTDV-NQEAAQKVVE---QYQL---N---------------ATVY-- 55 (344)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT-CSSEEEEEEECS-SHHHHHHHHH---HTTC---C---------------CEEE--
T ss_pred CeEEEEEECccHHHHHHHHHHHhh-CCCcEEEEEEcC-CHHHHHHHHH---HhCC---C---------------Ceee--
Confidence 678999999999999999998833 246999999886 4433322221 1110 0 0111
Q ss_pred CCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 012940 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 165 ~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap 209 (453)
.+++++ ..+.++|+|+-||+.....+.+..++++| |.|++--|
T Consensus 56 ~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~G-k~vl~EKP 98 (344)
T 3mz0_A 56 PNDDSL-LADENVDAVLVTSWGPAHESSVLKAIKAQ-KYVFCEKP 98 (344)
T ss_dssp SSHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred CCHHHH-hcCCCCCEEEECCCchhHHHHHHHHHHCC-CcEEEcCC
Confidence 112211 01126899999999999999999999999 57777655
No 56
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=97.26 E-value=0.00038 Score=69.29 Aligned_cols=96 Identities=24% Similarity=0.279 Sum_probs=63.2
Q ss_pred ceeeEEEEcCChhHH-HHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEe
Q 012940 85 AKLKVAINGFGRIGR-NFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (453)
Q Consensus 85 m~ikVaInGfGrIGR-~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~ 163 (453)
|++||||+|+|.||+ ..++++... ++++|++|-|....+.++. +| |.. | +.++
T Consensus 1 M~~rvgiiG~G~~g~~~~~~~l~~~--~~~~l~av~d~~~~~~~a~--~~----~~~---------------~--~~~~- 54 (349)
T 3i23_A 1 MTVKMGFIGFGKSANRYHLPYVMIR--ETLEVKTIFDLHVNEKAAA--PF----KEK---------------G--VNFT- 54 (349)
T ss_dssp CCEEEEEECCSHHHHHTTHHHHTTC--TTEEEEEEECTTCCHHHHH--HH----HTT---------------T--CEEE-
T ss_pred CeeEEEEEccCHHHHHHHHHHHhhC--CCeEEEEEECCCHHHHHHH--hh----CCC---------------C--CeEE-
Confidence 789999999999999 567777653 5699999988631111111 11 100 0 0111
Q ss_pred CCCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 012940 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 164 ~~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap 209 (453)
.+.+++- .+.++|+|+-||+.....+.+..++++| |.|++--|
T Consensus 55 -~~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP 97 (349)
T 3i23_A 55 -ADLNELL-TDPEIELITICTPAHTHYDLAKQAILAG-KSVIVEKP 97 (349)
T ss_dssp -SCTHHHH-SCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred -CCHHHHh-cCCCCCEEEEeCCcHHHHHHHHHHHHcC-CEEEEECC
Confidence 2232221 1236899999999999999999999999 57777444
No 57
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=97.19 E-value=0.00046 Score=67.73 Aligned_cols=96 Identities=20% Similarity=0.188 Sum_probs=60.0
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeC
Q 012940 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (453)
Q Consensus 86 ~ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~ 164 (453)
+|||+|+| +|++||.+++++.+. ++++||++-|....+.. |+-.+++ .+ +.- | +.++
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~--~~~eLv~~~d~~~~~~~----------G~d~gel---~g--~~~-g--v~v~-- 64 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAA--PDATLVGALDRTGSPQL----------GQDAGAF---LG--KQT-G--VALT-- 64 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHC--TTEEEEEEBCCTTCTTT----------TSBTTTT---TT--CCC-S--CBCB--
T ss_pred ccEEEEECCCCHHHHHHHHHHHhC--CCCEEEEEEEecCcccc----------cccHHHH---hC--CCC-C--ceec--
Confidence 48999999 999999999999876 56999998765221110 1101110 00 000 1 1221
Q ss_pred CCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEe
Q 012940 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIIT 207 (453)
Q Consensus 165 ~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIIS 207 (453)
.+++++- .++|+|||+|......+.+...+++|. .+||.
T Consensus 65 ~dl~~ll---~~~DVVIDfT~p~a~~~~~~~al~~G~-~vVig 103 (272)
T 4f3y_A 65 DDIERVC---AEADYLIDFTLPEGTLVHLDAALRHDV-KLVIG 103 (272)
T ss_dssp CCHHHHH---HHCSEEEECSCHHHHHHHHHHHHHHTC-EEEEC
T ss_pred CCHHHHh---cCCCEEEEcCCHHHHHHHHHHHHHcCC-CEEEE
Confidence 2222211 158999999987777788888999997 46663
No 58
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=97.17 E-value=0.00056 Score=67.60 Aligned_cols=95 Identities=18% Similarity=0.152 Sum_probs=63.8
Q ss_pred eeeEEEEcCChhHHH-HHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeC
Q 012940 86 KLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (453)
Q Consensus 86 ~ikVaInGfGrIGR~-vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~ 164 (453)
+|||||+|+|+||+. +++++... ++++|+||-|+ +++.+..+.+ .||. . +++
T Consensus 23 mirigiIG~G~ig~~~~~~~~~~~--~~~~lvav~d~-~~~~a~~~a~---~~g~---~----------------~~y-- 75 (350)
T 4had_A 23 MLRFGIISTAKIGRDNVVPAIQDA--ENCVVTAIASR-DLTRAREMAD---RFSV---P----------------HAF-- 75 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHC--SSEEEEEEECS-SHHHHHHHHH---HHTC---S----------------EEE--
T ss_pred ccEEEEEcChHHHHHHHHHHHHhC--CCeEEEEEECC-CHHHHHHHHH---HcCC---C----------------eee--
Confidence 589999999999986 57777765 56999999987 5443322221 1110 0 011
Q ss_pred CCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 012940 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 165 ~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap 209 (453)
.+.+++ ..+.++|+|+=||+...-.+.+..++++| |.|++--|
T Consensus 76 ~d~~el-l~~~~iDaV~I~tP~~~H~~~~~~al~aG-khVl~EKP 118 (350)
T 4had_A 76 GSYEEM-LASDVIDAVYIPLPTSQHIEWSIKAADAG-KHVVCEKP 118 (350)
T ss_dssp SSHHHH-HHCSSCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred CCHHHH-hcCCCCCEEEEeCCCchhHHHHHHHHhcC-CEEEEeCC
Confidence 111111 11236899999999999999999999999 56777555
No 59
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=97.14 E-value=0.00076 Score=66.71 Aligned_cols=94 Identities=23% Similarity=0.348 Sum_probs=64.7
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeCC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~~ 165 (453)
++||||+|+|.||+.+++.|... ++++|++|-|. +.+.+..+.+ .+| + .++ .
T Consensus 4 ~~rvgiiG~G~~g~~~~~~l~~~--~~~~l~av~d~-~~~~~~~~a~---~~g-----~---------------~~~--~ 55 (344)
T 3euw_A 4 TLRIALFGAGRIGHVHAANIAAN--PDLELVVIADP-FIEGAQRLAE---ANG-----A---------------EAV--A 55 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHC--TTEEEEEEECS-SHHHHHHHHH---TTT-----C---------------EEE--S
T ss_pred ceEEEEECCcHHHHHHHHHHHhC--CCcEEEEEECC-CHHHHHHHHH---HcC-----C---------------cee--C
Confidence 58999999999999999998875 46999999886 4433322221 011 0 111 1
Q ss_pred CCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 012940 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 166 dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap 209 (453)
+++++ ..+.++|+|+-||+.....+.+..++++| |.|++--|
T Consensus 56 ~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP 97 (344)
T 3euw_A 56 SPDEV-FARDDIDGIVIGSPTSTHVDLITRAVERG-IPALCEKP 97 (344)
T ss_dssp SHHHH-TTCSCCCEEEECSCGGGHHHHHHHHHHTT-CCEEECSC
T ss_pred CHHHH-hcCCCCCEEEEeCCchhhHHHHHHHHHcC-CcEEEECC
Confidence 12211 11236899999999999999999999999 46777655
No 60
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=97.14 E-value=0.00055 Score=67.97 Aligned_cols=96 Identities=19% Similarity=0.228 Sum_probs=60.9
Q ss_pred ceeeEEEEcCChhHHH-HHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEe
Q 012940 85 AKLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (453)
Q Consensus 85 m~ikVaInGfGrIGR~-vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~ 163 (453)
|++||||+|+|.||+. .++.+... .++++|++|-|. +++.. ..++ .+. | +.++
T Consensus 1 m~~rvgiiG~G~~g~~~~~~~~~~~-~~~~~l~av~d~-~~~~~-~~~~------~~~--------------~--~~~~- 54 (345)
T 3f4l_A 1 MVINCAFIGFGKSTTRYHLPYVLNR-KDSWHVAHIFRR-HAKPE-EQAP------IYS--------------H--IHFT- 54 (345)
T ss_dssp -CEEEEEECCSHHHHHHTHHHHTTC-TTTEEEEEEECS-SCCGG-GGSG------GGT--------------T--CEEE-
T ss_pred CceEEEEEecCHHHHHHHHHHHHhc-CCCeEEEEEEcC-CHhHH-HHHH------hcC--------------C--CceE-
Confidence 6799999999999996 56623222 256999999886 22211 1110 000 1 0111
Q ss_pred CCCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 012940 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 164 ~~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap 209 (453)
.+++++- .+.++|+|+-||+.....+.+...+++| |.|++--|
T Consensus 55 -~~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP 97 (345)
T 3f4l_A 55 -SDLDEVL-NDPDVKLVVVCTHADSHFEYAKRALEAG-KNVLVEKP 97 (345)
T ss_dssp -SCTHHHH-TCTTEEEEEECSCGGGHHHHHHHHHHTT-CEEEECSS
T ss_pred -CCHHHHh-cCCCCCEEEEcCChHHHHHHHHHHHHcC-CcEEEeCC
Confidence 2232221 1236999999999999999999999999 56777544
No 61
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=97.11 E-value=0.00059 Score=71.41 Aligned_cols=94 Identities=20% Similarity=0.267 Sum_probs=61.2
Q ss_pred eeeEEEEcCChhHHHHHHHHHhC-------CCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeE
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGR-------KDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKL 158 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r-------~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~ 158 (453)
++||||.|+|.||+.+++.+.++ ..++++|++|-+. +.+....++ + +.
T Consensus 10 ~irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~-~~~~~~~~~--~--------------~~-------- 64 (444)
T 3mtj_A 10 PIHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVR-NLDKAEALA--G--------------GL-------- 64 (444)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECS-CHHHHHHHH--T--------------TC--------
T ss_pred cccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEEC-CHHHhhhhc--c--------------cC--------
Confidence 58999999999999999988642 1246999999886 332211111 0 00
Q ss_pred EEEEeCCCCCCCCccccCccEEEcCCCC-CCChhhHHHHHHcCCCEEEEeCC
Q 012940 159 IKVVSNRDPLQLPWAELGIDIVIEGTGV-FVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 159 I~v~~~~dp~~l~W~~~gvDiVie~TG~-f~s~e~a~~hl~aGAkkVIISap 209 (453)
.++ .+++++ ..+.++|+|++|||. ....+.+..++++|. .||..+|
T Consensus 65 -~~~--~d~~el-l~d~diDvVve~tp~~~~h~~~~~~AL~aGK-hVvtenk 111 (444)
T 3mtj_A 65 -PLT--TNPFDV-VDDPEIDIVVELIGGLEPARELVMQAIANGK-HVVTANK 111 (444)
T ss_dssp -CEE--SCTHHH-HTCTTCCEEEECCCSSTTHHHHHHHHHHTTC-EEEECCH
T ss_pred -ccc--CCHHHH-hcCCCCCEEEEcCCCchHHHHHHHHHHHcCC-EEEECCc
Confidence 011 122221 112368999999996 777888999999994 5655545
No 62
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=97.07 E-value=0.00074 Score=67.67 Aligned_cols=93 Identities=22% Similarity=0.204 Sum_probs=64.1
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeCC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~~ 165 (453)
++||||+|+|.||+..++.+... ++++|++|-|. +++.....-+|+- . ++ .
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~--~~~~l~av~d~-~~~~~~~a~~~g~---------~---------------~~--~ 55 (359)
T 3e18_A 5 KYQLVIVGYGGMGSYHVTLASAA--DNLEVHGVFDI-LAEKREAAAQKGL---------K---------------IY--E 55 (359)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTS--TTEEEEEEECS-SHHHHHHHHTTTC---------C---------------BC--S
T ss_pred cCcEEEECcCHHHHHHHHHHHhC--CCcEEEEEEcC-CHHHHHHHHhcCC---------c---------------ee--C
Confidence 58999999999999999988754 46999999886 4443321111110 0 00 1
Q ss_pred CCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 012940 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 166 dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap 209 (453)
+.+++ ..+.++|+|+-||+.....+.+..++++| |.|++--|
T Consensus 56 ~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-khVl~EKP 97 (359)
T 3e18_A 56 SYEAV-LADEKVDAVLIATPNDSHKELAISALEAG-KHVVCEKP 97 (359)
T ss_dssp CHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred CHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCC-CCEEeeCC
Confidence 11111 11226899999999999999999999999 56777655
No 63
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=97.07 E-value=0.0011 Score=65.99 Aligned_cols=92 Identities=27% Similarity=0.387 Sum_probs=63.2
Q ss_pred eeeEEEEcCChhHHH-HHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeC
Q 012940 86 KLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (453)
Q Consensus 86 ~ikVaInGfGrIGR~-vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~ 164 (453)
++||||+|+|+||+. .++++... ++++|++|-|. +++... -+| . + +.++
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~~~~~--~~~~l~av~d~-~~~~~~--~~~-------~--------------~--~~~~-- 56 (352)
T 3kux_A 7 KIKVGLLGYGYASKTFHAPLIMGT--PGLELAGVSSS-DASKVH--ADW-------P--------------A--IPVV-- 56 (352)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTS--TTEEEEEEECS-CHHHHH--TTC-------S--------------S--CCEE--
T ss_pred CceEEEECCCHHHHHHHHHHHhhC--CCcEEEEEECC-CHHHHH--hhC-------C--------------C--CceE--
Confidence 589999999999997 77887654 56999999986 443321 010 0 0 0111
Q ss_pred CCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 012940 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 165 ~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap 209 (453)
.+.+++- .+.++|+|+-||+.....+.+..++++| |.|++--|
T Consensus 57 ~~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aG-khV~~EKP 99 (352)
T 3kux_A 57 SDPQMLF-NDPSIDLIVIPTPNDTHFPLAQSALAAG-KHVVVDKP 99 (352)
T ss_dssp SCHHHHH-HCSSCCEEEECSCTTTHHHHHHHHHHTT-CEEEECSS
T ss_pred CCHHHHh-cCCCCCEEEEeCChHHHHHHHHHHHHCC-CcEEEECC
Confidence 1222221 1236899999999999999999999999 57777555
No 64
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=97.06 E-value=0.00048 Score=69.97 Aligned_cols=97 Identities=22% Similarity=0.230 Sum_probs=64.8
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCC------CCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEE
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRK------DSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLI 159 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~------~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I 159 (453)
||||||+|+|+||+..++++.... .+.++||||-|+ +++.+..+.+ .|| ..
T Consensus 26 klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~-~~~~a~~~a~---~~~---~~---------------- 82 (412)
T 4gqa_A 26 RLNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQ-DQAMAERHAA---KLG---AE---------------- 82 (412)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECS-SHHHHHHHHH---HHT---CS----------------
T ss_pred cceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcC-CHHHHHHHHH---HcC---CC----------------
Confidence 699999999999999888876421 134799999987 4443322221 011 01
Q ss_pred EEEeCCCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 012940 160 KVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 160 ~v~~~~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap 209 (453)
+++ .+.+++ ..+.++|+|+=||+...-.+.+..++++| |.|++--|
T Consensus 83 ~~y--~d~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aG-khVl~EKP 128 (412)
T 4gqa_A 83 KAY--GDWREL-VNDPQVDVVDITSPNHLHYTMAMAAIAAG-KHVYCEKP 128 (412)
T ss_dssp EEE--SSHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESC
T ss_pred eEE--CCHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHcC-CCeEeecC
Confidence 011 111111 11236899999999999999999999999 57888666
No 65
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=97.06 E-value=0.00029 Score=70.64 Aligned_cols=36 Identities=33% Similarity=0.549 Sum_probs=29.6
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCC-----CCCceEEEEcCC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRK-----DSPLDVVVVNDS 121 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~-----~~~ieiVaInd~ 121 (453)
++||||.|+|.||+.+++.+.++. ..+++|++|-|.
T Consensus 6 ~irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~ 46 (331)
T 3c8m_A 6 TINLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADS 46 (331)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECS
T ss_pred EEeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEEC
Confidence 589999999999999999987642 114899999875
No 66
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=97.05 E-value=0.0011 Score=65.71 Aligned_cols=99 Identities=20% Similarity=0.214 Sum_probs=62.4
Q ss_pred cc-eeeEEEEcCChhHHHHHHHHHh-----CCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCe
Q 012940 84 VA-KLKVAINGFGRIGRNFLRCWHG-----RKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGK 157 (453)
Q Consensus 84 ~m-~ikVaInGfGrIGR~vlr~l~~-----r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk 157 (453)
.| |+||||+|+|+||+.-++++.. ...+.++||||-|+ +++.+..+.+ .||. .
T Consensus 22 ~MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~-~~~~a~~~a~---~~g~---~-------------- 80 (393)
T 4fb5_A 22 SMKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEA-NAGLAEARAG---EFGF---E-------------- 80 (393)
T ss_dssp --CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC---TTHHHHHH---HHTC---S--------------
T ss_pred CCCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECC-CHHHHHHHHH---HhCC---C--------------
Confidence 45 6999999999999988777642 12356899999987 3333222221 0110 0
Q ss_pred EEEEEeCCCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 012940 158 LIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 158 ~I~v~~~~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap 209 (453)
+++ .+.+++ ..+.++|+|+=||+...-.+.+.+++++|. .|++--|
T Consensus 81 --~~y--~d~~el-l~~~~iDaV~IatP~~~H~~~a~~al~aGk-hVl~EKP 126 (393)
T 4fb5_A 81 --KAT--ADWRAL-IADPEVDVVSVTTPNQFHAEMAIAALEAGK-HVWCEKP 126 (393)
T ss_dssp --EEE--SCHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTTC-EEEECSC
T ss_pred --eec--CCHHHH-hcCCCCcEEEECCChHHHHHHHHHHHhcCC-eEEEccC
Confidence 011 111111 112368999999999999999999999994 6777555
No 67
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=97.05 E-value=0.00087 Score=67.08 Aligned_cols=98 Identities=27% Similarity=0.262 Sum_probs=65.0
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeC
Q 012940 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (453)
Q Consensus 85 m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~ 164 (453)
|++||||+|+|.||+..++.+..+ .++++|++|-|. +++.+..+.+ .+|. . ..++
T Consensus 22 ~~~rvgiIG~G~~g~~~~~~l~~~-~~~~~lvav~d~-~~~~~~~~a~---~~g~---~---------------~~~~-- 76 (357)
T 3ec7_A 22 MTLKAGIVGIGMIGSDHLRRLANT-VSGVEVVAVCDI-VAGRAQAALD---KYAI---E---------------AKDY-- 76 (357)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT-CTTEEEEEEECS-STTHHHHHHH---HHTC---C---------------CEEE--
T ss_pred CeeeEEEECCcHHHHHHHHHHHhh-CCCcEEEEEEeC-CHHHHHHHHH---HhCC---C---------------Ceee--
Confidence 478999999999999999998733 256999999886 3332211111 0110 0 0111
Q ss_pred CCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 012940 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 165 ~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap 209 (453)
.+.+++ ..+.++|+|+-||+.....+.+..++++| |.|++--|
T Consensus 77 ~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP 119 (357)
T 3ec7_A 77 NDYHDL-INDKDVEVVIITASNEAHADVAVAALNAN-KYVFCEKP 119 (357)
T ss_dssp SSHHHH-HHCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCC-CCEEeecC
Confidence 122211 11126899999999999999999999999 57777655
No 68
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=97.04 E-value=0.001 Score=66.46 Aligned_cols=92 Identities=22% Similarity=0.259 Sum_probs=63.1
Q ss_pred eeeEEEEcCChhHHH-HHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeC
Q 012940 86 KLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (453)
Q Consensus 86 ~ikVaInGfGrIGR~-vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~ 164 (453)
++||||+|+|.||+. .++++... ++++|++|-|. +++.++. +|. + +.++
T Consensus 5 ~~rvgiiG~G~~g~~~~~~~l~~~--~~~~l~av~d~-~~~~~~~--~~~---------------------~--~~~~-- 54 (358)
T 3gdo_A 5 TIKVGILGYGLSGSVFHGPLLDVL--DEYQISKIMTS-RTEEVKR--DFP---------------------D--AEVV-- 54 (358)
T ss_dssp CEEEEEECCSHHHHHTTHHHHTTC--TTEEEEEEECS-CHHHHHH--HCT---------------------T--SEEE--
T ss_pred cceEEEEccCHHHHHHHHHHHhhC--CCeEEEEEEcC-CHHHHHh--hCC---------------------C--CceE--
Confidence 589999999999997 67777544 56999999986 3333211 110 0 0111
Q ss_pred CCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 012940 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 165 ~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap 209 (453)
.+.+++ ..+.++|+|+-||+.....+.+..++++| |.|++--|
T Consensus 55 ~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKP 97 (358)
T 3gdo_A 55 HELEEI-TNDPAIELVIVTTPSGLHYEHTMACIQAG-KHVVMEKP 97 (358)
T ss_dssp SSTHHH-HTCTTCCEEEECSCTTTHHHHHHHHHHTT-CEEEEESS
T ss_pred CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHcC-CeEEEecC
Confidence 122222 11236999999999999999999999999 57777555
No 69
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=97.04 E-value=0.00091 Score=67.14 Aligned_cols=36 Identities=31% Similarity=0.503 Sum_probs=30.2
Q ss_pred eeeEEEEcCChhHHHHHHHHHhC----CCCCceEEEEcCC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGR----KDSPLDVVVVNDS 121 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r----~~~~ieiVaInd~ 121 (453)
++||||.|+|.||+.+++.+.++ ..++++|++|-|+
T Consensus 4 ~irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~ 43 (325)
T 3ing_A 4 EIRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDS 43 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECS
T ss_pred eEEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEec
Confidence 58999999999999999999763 1146999999886
No 70
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=97.02 E-value=0.00061 Score=67.29 Aligned_cols=95 Identities=18% Similarity=0.166 Sum_probs=64.5
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhh-ccccceeecCceEEEecCCeEEECCeEEEEEe
Q 012940 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLL-KYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (453)
Q Consensus 85 m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~Ll-kyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~ 163 (453)
+++||||+|+|.||+.+++.+.+. ++++|++|-|. +.+....+. +|.- . . ++
T Consensus 4 ~~~~igiiG~G~~g~~~~~~l~~~--~~~~l~av~d~-~~~~~~~~~~~~~~-------~-~---------------~~- 56 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPRFVAGLRES--AQAEVRGIASR-RLENAQKMAKELAI-------P-V---------------AY- 56 (330)
T ss_dssp CCEEEEECSCCTTHHHHHHHHHHS--SSEEEEEEBCS-SSHHHHHHHHHTTC-------C-C---------------CB-
T ss_pred CeEEEEEECchHHHHHHHHHHHhC--CCcEEEEEEeC-CHHHHHHHHHHcCC-------C-c---------------ee-
Confidence 358999999999999999999875 46899999886 333322222 1110 0 0 00
Q ss_pred CCCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 012940 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 164 ~~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap 209 (453)
.+.+++ ..+.++|+|+-||+.....+.+..++++| |.|++--|
T Consensus 57 -~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~vl~EKP 99 (330)
T 3e9m_A 57 -GSYEEL-CKDETIDIIYIPTYNQGHYSAAKLALSQG-KPVLLEKP 99 (330)
T ss_dssp -SSHHHH-HHCTTCSEEEECCCGGGHHHHHHHHHHTT-CCEEECSS
T ss_pred -CCHHHH-hcCCCCCEEEEcCCCHHHHHHHHHHHHCC-CeEEEeCC
Confidence 111111 01126899999999999999999999999 46777655
No 71
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=97.02 E-value=0.00038 Score=69.29 Aligned_cols=95 Identities=16% Similarity=0.136 Sum_probs=64.8
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeC
Q 012940 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (453)
Q Consensus 85 m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~ 164 (453)
|++||||+|+|.||+..++.+... ++++|++|-|. +++.+..+.+ .+|. . .+
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~--~~~~lvav~d~-~~~~~~~~~~---~~g~-----~---------------~~-- 55 (354)
T 3db2_A 4 NPVGVAAIGLGRWAYVMADAYTKS--EKLKLVTCYSR-TEDKREKFGK---RYNC-----A---------------GD-- 55 (354)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTC--SSEEEEEEECS-SHHHHHHHHH---HHTC-----C---------------CC--
T ss_pred CcceEEEEccCHHHHHHHHHHHhC--CCcEEEEEECC-CHHHHHHHHH---HcCC-----C---------------Cc--
Confidence 468999999999999999988754 46999999886 4443322221 0110 0 00
Q ss_pred CCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 012940 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 165 ~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap 209 (453)
.+++++ ..+.++|+|+-||+.....+.+..++++| |.|++--|
T Consensus 56 ~~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~vl~EKP 98 (354)
T 3db2_A 56 ATMEAL-LAREDVEMVIITVPNDKHAEVIEQCARSG-KHIYVEKP 98 (354)
T ss_dssp SSHHHH-HHCSSCCEEEECSCTTSHHHHHHHHHHTT-CEEEEESS
T ss_pred CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHcC-CEEEEccC
Confidence 111111 11136899999999999999999999999 56777666
No 72
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=97.00 E-value=0.00083 Score=70.37 Aligned_cols=109 Identities=17% Similarity=0.318 Sum_probs=62.7
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEE-----CCeEEE
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISV-----DGKLIK 160 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v-----~Gk~I~ 160 (453)
++||||+|+|+||+.+++.+... +.++|++|-|. +++......+ ..||. ...+... ++.-.+ .| .+.
T Consensus 23 ~IRVGIIGaG~iG~~~~~~l~~~--~~veLvAV~D~-~~era~~~a~--~~yG~-~~~~~~~-~~~~~i~~a~~~g-~~~ 94 (446)
T 3upl_A 23 PIRIGLIGAGEMGTDIVTQVARM--QGIEVGALSAR-RLPNTFKAIR--TAYGD-EENAREA-TTESAMTRAIEAG-KIA 94 (446)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTS--SSEEEEEEECS-STHHHHHHHH--HHHSS-STTEEEC-SSHHHHHHHHHTT-CEE
T ss_pred ceEEEEECChHHHHHHHHHHhhC--CCcEEEEEEeC-CHHHHHHHHH--HhcCC-ccccccc-cchhhhhhhhccC-Cce
Confidence 58999999999999999987653 57999999987 4443322221 00120 0011100 000000 01 122
Q ss_pred EEeCCCCCCCCccccCccEEEcCCCCC-CChhhHHHHHHcCCCEEEE
Q 012940 161 VVSNRDPLQLPWAELGIDIVIEGTGVF-VDGPGAGKHIQAGAKKVII 206 (453)
Q Consensus 161 v~~~~dp~~l~W~~~gvDiVie~TG~f-~s~e~a~~hl~aGAkkVII 206 (453)
++ .|.+++ ..+.++|+|++|||.. ...+.+..++++|- .|++
T Consensus 95 v~--~D~eeL-L~d~dIDaVviaTp~p~~H~e~a~~AL~AGK-HVv~ 137 (446)
T 3upl_A 95 VT--DDNDLI-LSNPLIDVIIDATGIPEVGAETGIAAIRNGK-HLVM 137 (446)
T ss_dssp EE--SCHHHH-HTCTTCCEEEECSCCHHHHHHHHHHHHHTTC-EEEE
T ss_pred EE--CCHHHH-hcCCCCCEEEEcCCChHHHHHHHHHHHHcCC-cEEe
Confidence 32 222222 1223699999999864 45688889999994 5554
No 73
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=97.00 E-value=0.00022 Score=70.71 Aligned_cols=97 Identities=18% Similarity=0.231 Sum_probs=60.8
Q ss_pred ceeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEe
Q 012940 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (453)
Q Consensus 85 m~ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~ 163 (453)
|++||+|+| +|++||.+++++.+. ++++||++-|..+.+. .-.|. |.+.+- .. .| +.++
T Consensus 20 ~~irV~V~Ga~GrMGr~i~~~v~~~--~~~eLvg~vd~~~~~~----~G~d~--gel~G~----~~-----~g--v~v~- 79 (288)
T 3ijp_A 20 GSMRLTVVGANGRMGRELITAIQRR--KDVELCAVLVRKGSSF----VDKDA--SILIGS----DF-----LG--VRIT- 79 (288)
T ss_dssp -CEEEEESSTTSHHHHHHHHHHHTC--SSEEEEEEBCCTTCTT----TTSBG--GGGTTC----SC-----CS--CBCB-
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhC--CCCEEEEEEecCCccc----cccch--HHhhcc----Cc-----CC--ceee-
Confidence 368999999 999999999999865 5799999987632111 00111 111100 00 01 2222
Q ss_pred CCCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEE
Q 012940 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVII 206 (453)
Q Consensus 164 ~~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVII 206 (453)
.+++++- .++|+|||+|......+.+...+++|. .+||
T Consensus 80 -~dl~~ll---~~aDVvIDFT~p~a~~~~~~~~l~~Gv-~vVi 117 (288)
T 3ijp_A 80 -DDPESAF---SNTEGILDFSQPQASVLYANYAAQKSL-IHII 117 (288)
T ss_dssp -SCHHHHT---TSCSEEEECSCHHHHHHHHHHHHHHTC-EEEE
T ss_pred -CCHHHHh---cCCCEEEEcCCHHHHHHHHHHHHHcCC-CEEE
Confidence 2333322 168999999987767778888999997 4566
No 74
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=96.98 E-value=0.0014 Score=64.21 Aligned_cols=94 Identities=20% Similarity=0.289 Sum_probs=63.6
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeCC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~~ 165 (453)
++||||+|+|.||+.+++.|... +.+++++|-|. +++....+.+ .+|. ..++ .
T Consensus 1 ~~~vgiiG~G~~g~~~~~~l~~~--~~~~~~~v~d~-~~~~~~~~~~---~~~~-------------------~~~~--~ 53 (325)
T 2ho3_A 1 MLKLGVIGTGAISHHFIEAAHTS--GEYQLVAIYSR-KLETAATFAS---RYQN-------------------IQLF--D 53 (325)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT--TSEEEEEEECS-SHHHHHHHGG---GSSS-------------------CEEE--S
T ss_pred CeEEEEEeCCHHHHHHHHHHHhC--CCeEEEEEEeC-CHHHHHHHHH---HcCC-------------------CeEe--C
Confidence 37999999999999999998765 45899999876 4433222111 1110 0111 2
Q ss_pred CCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 012940 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 166 dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap 209 (453)
+++++- +.++|+|+.||+.....+.+..++++| |.|++--|
T Consensus 54 ~~~~~l--~~~~D~V~i~tp~~~h~~~~~~al~~g-k~V~~EKP 94 (325)
T 2ho3_A 54 QLEVFF--KSSFDLVYIASPNSLHFAQAKAALSAG-KHVILEKP 94 (325)
T ss_dssp CHHHHH--TSSCSEEEECSCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred CHHHHh--CCCCCEEEEeCChHHHHHHHHHHHHcC-CcEEEecC
Confidence 232222 136899999999988889999999999 46776544
No 75
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=96.94 E-value=0.00097 Score=65.73 Aligned_cols=95 Identities=18% Similarity=0.181 Sum_probs=62.7
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeCC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~~ 165 (453)
++||||+|+|.||+.+++.+... +++++++|-|. +++....+.+ .+|. . .++ .
T Consensus 5 ~~rigiiG~G~ig~~~~~~l~~~--~~~~~~av~d~-~~~~~~~~a~---~~~~---~----------------~~~--~ 57 (329)
T 3evn_A 5 KVRYGVVSTAKVAPRFIEGVRLA--GNGEVVAVSSR-TLESAQAFAN---KYHL---P----------------KAY--D 57 (329)
T ss_dssp CEEEEEEBCCTTHHHHHHHHHHH--CSEEEEEEECS-CSSTTCC------CCCC---S----------------CEE--S
T ss_pred ceEEEEEechHHHHHHHHHHHhC--CCcEEEEEEcC-CHHHHHHHHH---HcCC---C----------------ccc--C
Confidence 58999999999999999998764 45899999876 2222111110 0100 0 011 1
Q ss_pred CCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 012940 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 166 dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap 209 (453)
+.+++- .+.++|+|+-||+.....+.+..++++| |.|++--|
T Consensus 58 ~~~~ll-~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP 99 (329)
T 3evn_A 58 KLEDML-ADESIDVIYVATINQDHYKVAKAALLAG-KHVLVEKP 99 (329)
T ss_dssp CHHHHH-TCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred CHHHHh-cCCCCCEEEECCCcHHHHHHHHHHHHCC-CeEEEccC
Confidence 222221 1236899999999999999999999999 46777665
No 76
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=96.89 E-value=0.0016 Score=65.23 Aligned_cols=92 Identities=18% Similarity=0.331 Sum_probs=62.4
Q ss_pred eeeEEEEcCChhHHH-HHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeC
Q 012940 86 KLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (453)
Q Consensus 86 ~ikVaInGfGrIGR~-vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~ 164 (453)
++||||+|+|.||+. .++++... ++++|++|-|. +++.+.. +| .+. .++
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~l~~~--~~~~l~av~d~-~~~~~~~--~~-------~~~----------------~~~-- 56 (364)
T 3e82_A 7 TINIALIGYGFVGKTFHAPLIRSV--PGLNLAFVASR-DEEKVKR--DL-------PDV----------------TVI-- 56 (364)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTS--TTEEEEEEECS-CHHHHHH--HC-------TTS----------------EEE--
T ss_pred cceEEEECCCHHHHHHHHHHHhhC--CCeEEEEEEcC-CHHHHHh--hC-------CCC----------------cEE--
Confidence 589999999999997 67777654 56999999987 4433221 11 000 111
Q ss_pred CCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 012940 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 165 ~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap 209 (453)
.+.+++- .+.++|+|+-||+.....+.+..++++| |.|++--|
T Consensus 57 ~~~~~ll-~~~~~D~V~i~tp~~~H~~~~~~al~aG-k~Vl~EKP 99 (364)
T 3e82_A 57 ASPEAAV-QHPDVDLVVIASPNATHAPLARLALNAG-KHVVVDKP 99 (364)
T ss_dssp SCHHHHH-TCTTCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred CCHHHHh-cCCCCCEEEEeCChHHHHHHHHHHHHCC-CcEEEeCC
Confidence 1222211 1236899999999999999999999999 56777544
No 77
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=96.89 E-value=0.0012 Score=65.91 Aligned_cols=92 Identities=20% Similarity=0.313 Sum_probs=63.0
Q ss_pred eeeEEEEcCChhHHH-HHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeC
Q 012940 86 KLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (453)
Q Consensus 86 ~ikVaInGfGrIGR~-vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~ 164 (453)
++||||+|+|+||+. .++++... ++++|++|-|. +++.++. +| + + +.++
T Consensus 5 ~~rvgiiG~G~~g~~~~~~~l~~~--~~~~l~av~d~-~~~~~~~--~~-------~--------------~--~~~~-- 54 (362)
T 3fhl_A 5 IIKTGLAAFGMSGQVFHAPFISTN--PHFELYKIVER-SKELSKE--RY-------P--------------Q--ASIV-- 54 (362)
T ss_dssp CEEEEESCCSHHHHHTTHHHHHHC--TTEEEEEEECS-SCCGGGT--TC-------T--------------T--SEEE--
T ss_pred ceEEEEECCCHHHHHHHHHHHhhC--CCeEEEEEEcC-CHHHHHH--hC-------C--------------C--CceE--
Confidence 589999999999997 67887665 46999999886 2222110 11 0 1 0111
Q ss_pred CCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 012940 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 165 ~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap 209 (453)
.+.+++- .+.++|+|+-||+.....+.+..++++| |.|++--|
T Consensus 55 ~~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKP 97 (362)
T 3fhl_A 55 RSFKELT-EDPEIDLIVVNTPDNTHYEYAGMALEAG-KNVVVEKP 97 (362)
T ss_dssp SCSHHHH-TCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred CCHHHHh-cCCCCCEEEEeCChHHHHHHHHHHHHCC-CeEEEecC
Confidence 2222221 1236999999999999999999999999 57777555
No 78
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=96.89 E-value=0.00063 Score=67.31 Aligned_cols=97 Identities=19% Similarity=0.187 Sum_probs=63.9
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCC-----CCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEE
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRK-----DSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIK 160 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~-----~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~ 160 (453)
++||||+|+|.||+..++++.... ....+|+||-|. +++.+..+.+ .||. . .
T Consensus 6 klrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~-~~~~a~~~a~---~~g~---~----------------~ 62 (390)
T 4h3v_A 6 NLGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGR-DAEAVRAAAG---KLGW---S----------------T 62 (390)
T ss_dssp EEEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECS-SHHHHHHHHH---HHTC---S----------------E
T ss_pred cCcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcC-CHHHHHHHHH---HcCC---C----------------c
Confidence 699999999999999888775421 012489999987 5444322221 0110 0 0
Q ss_pred EEeCCCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 012940 161 VVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 161 v~~~~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap 209 (453)
++ .+.+++ ..+.++|+|+=||+.....+.+..++++| |.|++--|
T Consensus 63 ~~--~d~~~l-l~~~~iDaV~I~tP~~~H~~~~~~al~aG-khVl~EKP 107 (390)
T 4h3v_A 63 TE--TDWRTL-LERDDVQLVDVCTPGDSHAEIAIAALEAG-KHVLCEKP 107 (390)
T ss_dssp EE--SCHHHH-TTCTTCSEEEECSCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred cc--CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHcC-CCceeecC
Confidence 11 112111 11236999999999999999999999999 57888655
No 79
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.89 E-value=0.0014 Score=53.35 Aligned_cols=97 Identities=24% Similarity=0.259 Sum_probs=58.9
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeC
Q 012940 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (453)
Q Consensus 85 m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~ 164 (453)
|++||+|.|.|.||+.+++.|..+. ..+|+++.. +++.+..+.... +. +.....
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g--~~~v~~~~r--~~~~~~~~~~~~---------~~-------------~~~~d~ 57 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSS--NYSVTVADH--DLAALAVLNRMG---------VA-------------TKQVDA 57 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCS--SEEEEEEES--CHHHHHHHHTTT---------CE-------------EEECCT
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCC--CceEEEEeC--CHHHHHHHHhCC---------Cc-------------EEEecC
Confidence 4469999999999999999998763 257777654 333332222100 00 000000
Q ss_pred CCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEe
Q 012940 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIIT 207 (453)
Q Consensus 165 ~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIIS 207 (453)
.+++.+.-.-.++|+||.|+|.......+...++.|++.+.++
T Consensus 58 ~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~g~~~~~~~ 100 (118)
T 3ic5_A 58 KDEAGLAKALGGFDAVISAAPFFLTPIIAKAAKAAGAHYFDLT 100 (118)
T ss_dssp TCHHHHHHHTTTCSEEEECSCGGGHHHHHHHHHHTTCEEECCC
T ss_pred CCHHHHHHHHcCCCEEEECCCchhhHHHHHHHHHhCCCEEEec
Confidence 1111110001268999999998888888888889998765554
No 80
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=96.85 E-value=0.0013 Score=65.65 Aligned_cols=94 Identities=17% Similarity=0.228 Sum_probs=63.6
Q ss_pred eeeEEEEcCChhHH-HHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeC
Q 012940 86 KLKVAINGFGRIGR-NFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (453)
Q Consensus 86 ~ikVaInGfGrIGR-~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~ 164 (453)
++||||+|+|.||+ .+++.|... ++++|++|-|. +++....+.+ .+|. ..+
T Consensus 27 ~~rigiIG~G~~g~~~~~~~l~~~--~~~~l~av~d~-~~~~~~~~a~---~~g~--------------------~~~-- 78 (350)
T 3rc1_A 27 PIRVGVIGCADIAWRRALPALEAE--PLTEVTAIASR-RWDRAKRFTE---RFGG--------------------EPV-- 78 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHC--TTEEEEEEEES-SHHHHHHHHH---HHCS--------------------EEE--
T ss_pred ceEEEEEcCcHHHHHHHHHHHHhC--CCeEEEEEEcC-CHHHHHHHHH---HcCC--------------------CCc--
Confidence 68999999999998 788988765 46999999876 4433322211 0110 011
Q ss_pred CCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 012940 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 165 ~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap 209 (453)
.+.+++ ..+.++|+|+-||+.....+.+..++++| |.|++--|
T Consensus 79 ~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-k~Vl~EKP 121 (350)
T 3rc1_A 79 EGYPAL-LERDDVDAVYVPLPAVLHAEWIDRALRAG-KHVLAEKP 121 (350)
T ss_dssp ESHHHH-HTCTTCSEEEECCCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred CCHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHCC-CcEEEeCC
Confidence 111111 11126899999999999999999999999 46777555
No 81
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=96.84 E-value=0.0012 Score=64.68 Aligned_cols=93 Identities=22% Similarity=0.274 Sum_probs=63.5
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeC
Q 012940 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (453)
Q Consensus 85 m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~ 164 (453)
+++||||+|+|++|+.+++.|.+. +.+++++|-|. +++.+..+. .. +.++
T Consensus 9 ~~~~igiIG~G~~g~~~~~~l~~~--~~~~~v~v~d~-~~~~~~~~~-----------------~~--------~~~~-- 58 (315)
T 3c1a_A 9 SPVRLALIGAGRWGKNYIRTIAGL--PGAALVRLASS-NPDNLALVP-----------------PG--------CVIE-- 58 (315)
T ss_dssp CCEEEEEEECTTTTTTHHHHHHHC--TTEEEEEEEES-CHHHHTTCC-----------------TT--------CEEE--
T ss_pred CcceEEEECCcHHHHHHHHHHHhC--CCcEEEEEEeC-CHHHHHHHH-----------------hh--------Cccc--
Confidence 458999999999999999999875 45899999876 333221111 11 1121
Q ss_pred CCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 012940 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 165 ~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap 209 (453)
.+++++- .+.++|+|+.||+.....+.+..++++| |.|++--|
T Consensus 59 ~~~~~~l-~~~~~D~V~i~tp~~~h~~~~~~al~~G-k~v~~eKP 101 (315)
T 3c1a_A 59 SDWRSVV-SAPEVEAVIIATPPATHAEITLAAIASG-KAVLVEKP 101 (315)
T ss_dssp SSTHHHH-TCTTCCEEEEESCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred CCHHHHh-hCCCCCEEEEeCChHHHHHHHHHHHHCC-CcEEEcCC
Confidence 2222221 1126899999999988889999999999 46776544
No 82
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=96.80 E-value=0.0017 Score=64.69 Aligned_cols=98 Identities=15% Similarity=0.163 Sum_probs=63.7
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeCC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~~ 165 (453)
++||||+|+|.||+.+++.|... +++++++|-|. +++....+.+ .+|..+ . ..++ .
T Consensus 6 ~~~vgiiG~G~ig~~~~~~l~~~--~~~~lv~v~d~-~~~~~~~~a~---~~~~~~-~---------------~~~~--~ 61 (362)
T 1ydw_A 6 QIRIGVMGCADIARKVSRAIHLA--PNATISGVASR-SLEKAKAFAT---ANNYPE-S---------------TKIH--G 61 (362)
T ss_dssp CEEEEEESCCTTHHHHHHHHHHC--TTEEEEEEECS-SHHHHHHHHH---HTTCCT-T---------------CEEE--S
T ss_pred ceEEEEECchHHHHHHHHHHhhC--CCcEEEEEEcC-CHHHHHHHHH---HhCCCC-C---------------Ceee--C
Confidence 58999999999999999998765 45899999886 4433322211 111000 0 0111 1
Q ss_pred CCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 012940 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 166 dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap 209 (453)
+.+++ ..+.++|+|+.||+.....+.+..++++|. .|++--|
T Consensus 62 ~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aGk-~V~~EKP 103 (362)
T 1ydw_A 62 SYESL-LEDPEIDALYVPLPTSLHVEWAIKAAEKGK-HILLEKP 103 (362)
T ss_dssp SHHHH-HHCTTCCEEEECCCGGGHHHHHHHHHTTTC-EEEECSS
T ss_pred CHHHH-hcCCCCCEEEEcCChHHHHHHHHHHHHCCC-eEEEecC
Confidence 12211 111268999999999988899999999994 6776444
No 83
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=96.79 E-value=0.0016 Score=62.97 Aligned_cols=122 Identities=16% Similarity=0.186 Sum_probs=74.3
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeCC
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~~ 165 (453)
|||+|+| +|++||.+++++.+. ++++|+++-|.. .
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~--~~~elva~~d~~------------------------------------------~ 36 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAA--DDLTLSAELDAG------------------------------------------D 36 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHC--TTCEEEEEECTT------------------------------------------C
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCCEEEEEEccC------------------------------------------C
Confidence 5899999 699999999998765 458998886531 0
Q ss_pred CCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEeccCccc---cCc----c-CCeEE--
Q 012940 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKD---YDH----E-VANIV-- 235 (453)
Q Consensus 166 dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISaps~d~dvPtvV~gVN~~~---~~~----~-~~~IV-- 235 (453)
+++.+. ..++|+|||+|......+.+...+++|.. +||..+.. +.+. +.. . ...++
T Consensus 37 dl~~~~--~~~~DvvIDfT~p~a~~~~~~~a~~~g~~-~VigTTG~-----------~~e~~~~l~~aa~~~~~~~vv~a 102 (245)
T 1p9l_A 37 PLSLLT--DGNTEVVIDFTHPDVVMGNLEFLIDNGIH-AVVGTTGF-----------TAERFQQVESWLVAKPNTSVLIA 102 (245)
T ss_dssp CTHHHH--HTTCCEEEECSCTTTHHHHHHHHHHTTCE-EEECCCCC-----------CHHHHHHHHHHHHTSTTCEEEEC
T ss_pred CHHHHh--ccCCcEEEEccChHHHHHHHHHHHHcCCC-EEEcCCCC-----------CHHHHHHHHHHHHhCCCCCEEEE
Confidence 011110 01478999999888778888888888874 55533322 1221 110 0 13333
Q ss_pred ecCCcchhhhhhHHHHHhhhcCeeEEEEEeeec
Q 012940 236 SNASCTTNCLAPFVKVMDEELGIVKGAMTTTHS 268 (453)
Q Consensus 236 SnaSCTTn~Lapvlk~L~d~fGI~~~~mTTiha 268 (453)
+|-|=-.|-|.-+++-+-+.|. .+.|.-.|-
T Consensus 103 ~N~siGv~ll~~l~~~aa~~~~--dieIiE~HH 133 (245)
T 1p9l_A 103 PNFAIGAVLSMHFAKQAARFFD--SAEVIELHH 133 (245)
T ss_dssp SCCCHHHHHHHHHHHHHGGGCS--EEEEEEEEC
T ss_pred CCccHHHHHHHHHHHHHHhhcC--CEEEEECcc
Confidence 3334445555556666656663 666666664
No 84
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=96.78 E-value=0.0017 Score=63.92 Aligned_cols=95 Identities=18% Similarity=0.178 Sum_probs=61.9
Q ss_pred eeeEEEEcCChhHHHHHHHHH-hCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeC
Q 012940 86 KLKVAINGFGRIGRNFLRCWH-GRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~-~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~ 164 (453)
++||||+|+|.||+..++.|. .. +.+++++|-|. +++.+..+.+ .+|. . .++
T Consensus 8 ~~~v~iiG~G~ig~~~~~~l~~~~--~~~~~vav~d~-~~~~~~~~a~---~~g~---~----------------~~~-- 60 (346)
T 3cea_A 8 PLRAAIIGLGRLGERHARHLVNKI--QGVKLVAACAL-DSNQLEWAKN---ELGV---E----------------TTY-- 60 (346)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHTC--SSEEEEEEECS-CHHHHHHHHH---TTCC---S----------------EEE--
T ss_pred cceEEEEcCCHHHHHHHHHHHhcC--CCcEEEEEecC-CHHHHHHHHH---HhCC---C----------------ccc--
Confidence 589999999999999999887 43 45899999876 3333222111 0110 0 011
Q ss_pred CCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 012940 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 165 ~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap 209 (453)
.+.+++ ..+.++|+|+.||+.....+.+..++++| |.|++--|
T Consensus 61 ~~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~G-~~v~~eKp 103 (346)
T 3cea_A 61 TNYKDM-IDTENIDAIFIVAPTPFHPEMTIYAMNAG-LNVFCEKP 103 (346)
T ss_dssp SCHHHH-HTTSCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred CCHHHH-hcCCCCCEEEEeCChHhHHHHHHHHHHCC-CEEEEcCC
Confidence 111111 01126899999999998889999999999 45666433
No 85
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=96.77 E-value=0.00095 Score=66.36 Aligned_cols=96 Identities=21% Similarity=0.228 Sum_probs=65.4
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeC
Q 012940 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (453)
Q Consensus 85 m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~ 164 (453)
+++||||+|+|.||+..++.+.... +.+++++|-|. +.+.+..+.+ .+| +.++
T Consensus 12 ~~~rvgiiG~G~~g~~~~~~l~~~~-~~~~lvav~d~-~~~~~~~~~~---~~~--------------------~~~~-- 64 (354)
T 3q2i_A 12 RKIRFALVGCGRIANNHFGALEKHA-DRAELIDVCDI-DPAALKAAVE---RTG--------------------ARGH-- 64 (354)
T ss_dssp SCEEEEEECCSTTHHHHHHHHHHTT-TTEEEEEEECS-SHHHHHHHHH---HHC--------------------CEEE--
T ss_pred CcceEEEEcCcHHHHHHHHHHHhCC-CCeEEEEEEcC-CHHHHHHHHH---HcC--------------------Ccee--
Confidence 3589999999999999999988752 46999999886 4443322221 011 0111
Q ss_pred CCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 012940 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 165 ~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap 209 (453)
.+++++ ..+.++|+|+-||+.....+.+..++++| |.|++--|
T Consensus 65 ~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~~g-k~v~~EKP 107 (354)
T 3q2i_A 65 ASLTDM-LAQTDADIVILTTPSGLHPTQSIECSEAG-FHVMTEKP 107 (354)
T ss_dssp SCHHHH-HHHCCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSS
T ss_pred CCHHHH-hcCCCCCEEEECCCcHHHHHHHHHHHHCC-CCEEEeCC
Confidence 122222 11226899999999998889999999999 56777555
No 86
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=96.75 E-value=0.0011 Score=64.01 Aligned_cols=33 Identities=18% Similarity=0.411 Sum_probs=28.7
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~ 121 (453)
+|||+|+|+|++||.+++++.++ ++ +||++-|.
T Consensus 3 MmkI~ViGaGrMG~~i~~~l~~~--~~-eLva~~d~ 35 (243)
T 3qy9_A 3 SMKILLIGYGAMNQRVARLAEEK--GH-EIVGVIEN 35 (243)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TC-EEEEEECS
T ss_pred ceEEEEECcCHHHHHHHHHHHhC--CC-EEEEEEec
Confidence 48999999999999999999876 46 99988664
No 87
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=96.75 E-value=0.0012 Score=62.19 Aligned_cols=136 Identities=15% Similarity=0.198 Sum_probs=78.3
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeCCC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~~d 166 (453)
|||||+|+|++|+.+++.|.. ++++++++-|... + ... ++ .+
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~---~g~~lv~v~d~~~-~----------------------~~~----------~~--~~ 42 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLER---NGFEIAAILDVRG-E----------------------HEK----------MV--RG 42 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---TTCEEEEEECSSC-C----------------------CTT----------EE--SS
T ss_pred CEEEEECCCHHHHHHHHHHhc---CCCEEEEEEecCc-c----------------------hhh----------hc--CC
Confidence 489999999999999999874 3489988876410 0 000 11 22
Q ss_pred CCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEeccCccccCccCCeEEecCCcchhhhh
Q 012940 167 PLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCTTNCLA 246 (453)
Q Consensus 167 p~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISaps~d~dvPtvV~gVN~~~~~~~~~~IVSnaSCTTn~La 246 (453)
++++-- .++|+|++|++.....+.+..++++|. .||+..|... +.+-....+- +........++-.+++... .
T Consensus 43 ~~~l~~--~~~DvVv~~~~~~~~~~~~~~~l~~G~-~vv~~~~~~~-~~~~~~~~l~-~~a~~~g~~~~i~~~~~g~--~ 115 (236)
T 2dc1_A 43 IDEFLQ--REMDVAVEAASQQAVKDYAEKILKAGI-DLIVLSTGAF-ADRDFLSRVR-EVCRKTGRRVYIASGAIGG--L 115 (236)
T ss_dssp HHHHTT--SCCSEEEECSCHHHHHHHHHHHHHTTC-EEEESCGGGG-GSHHHHHHHH-HHHHHHCCCEEECCTTCSC--H
T ss_pred HHHHhc--CCCCEEEECCCHHHHHHHHHHHHHCCC-cEEEECcccC-ChHHHHHHHH-HHHHhcCCeEEecCccccC--h
Confidence 322211 268999999999888888889999996 3444333210 1110000110 0111111233333333322 2
Q ss_pred hHHHHHhhhcCeeEEEEEeeecc
Q 012940 247 PFVKVMDEELGIVKGAMTTTHSY 269 (453)
Q Consensus 247 pvlk~L~d~fGI~~~~mTTiha~ 269 (453)
..++.... |++++.+++.|..
T Consensus 116 ~~~~~~~~--~~~~~~~~~~~~~ 136 (236)
T 2dc1_A 116 DAIFSASE--LIEEIVLTTRKNW 136 (236)
T ss_dssp HHHHHTGG--GEEEEEEEEEEEG
T ss_pred HHHHHhhc--cccEEEEEEEcCh
Confidence 34444443 8999999998875
No 88
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=96.74 E-value=0.0013 Score=66.37 Aligned_cols=94 Identities=14% Similarity=0.173 Sum_probs=65.0
Q ss_pred ceeeEEEEcCC-hhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhh-ccccceeecCceEEEecCCeEEECCeEEEEE
Q 012940 85 AKLKVAINGFG-RIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLL-KYDSLLGTFKADVKIVDNETISVDGKLIKVV 162 (453)
Q Consensus 85 m~ikVaInGfG-rIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~Ll-kyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~ 162 (453)
|++||||+|+| ++|+..++.+... ++++|++|-|. +++....+. +|.- .++
T Consensus 1 ~~~rigiiG~G~~~~~~~~~~l~~~--~~~~l~av~d~-~~~~~~~~a~~~g~------------------------~~~ 53 (387)
T 3moi_A 1 MKIRFGICGLGFAGSVLMAPAMRHH--PDAQIVAACDP-NEDVRERFGKEYGI------------------------PVF 53 (387)
T ss_dssp CCEEEEEECCSHHHHTTHHHHHHHC--TTEEEEEEECS-CHHHHHHHHHHHTC------------------------CEE
T ss_pred CceEEEEEeCCHHHHHHHHHHHHhC--CCeEEEEEEeC-CHHHHHHHHHHcCC------------------------CeE
Confidence 57899999999 9999999998765 46999999987 433322211 1110 011
Q ss_pred eCCCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 012940 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 163 ~~~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap 209 (453)
.+.+++ ..+.++|+|+-||+.....+.+..++++| |.|++--|
T Consensus 54 --~~~~el-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-k~Vl~EKP 96 (387)
T 3moi_A 54 --ATLAEM-MQHVQMDAVYIASPHQFHCEHVVQASEQG-LHIIVEKP 96 (387)
T ss_dssp --SSHHHH-HHHSCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred --CCHHHH-HcCCCCCEEEEcCCcHHHHHHHHHHHHCC-CceeeeCC
Confidence 122222 11226899999999998889999999999 57777555
No 89
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=96.73 E-value=0.0024 Score=62.39 Aligned_cols=92 Identities=16% Similarity=0.169 Sum_probs=61.0
Q ss_pred eeeEEEEcCChhHHH-HHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeC
Q 012940 86 KLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (453)
Q Consensus 86 ~ikVaInGfGrIGR~-vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~ 164 (453)
++||||+|+|.||+. +++.|... +++++++|-|. +++....+.+ .+|. .++
T Consensus 5 ~~~vgiiG~G~~g~~~~~~~l~~~--~~~~lvav~d~-~~~~~~~~~~---~~g~--------------------~~~-- 56 (319)
T 1tlt_A 5 KLRIGVVGLGGIAQKAWLPVLAAA--SDWTLQGAWSP-TRAKALPICE---SWRI--------------------PYA-- 56 (319)
T ss_dssp CEEEEEECCSTHHHHTHHHHHHSC--SSEEEEEEECS-SCTTHHHHHH---HHTC--------------------CBC--
T ss_pred cceEEEECCCHHHHHHHHHHHHhC--CCeEEEEEECC-CHHHHHHHHH---HcCC--------------------Ccc--
Confidence 589999999999996 88888654 45899999876 2222211110 0110 010
Q ss_pred CCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 012940 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 165 ~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap 209 (453)
.+++.+ +.++|+|+.||+.....+.+...+++|. .|++--|
T Consensus 57 ~~~~~l---~~~~D~V~i~tp~~~h~~~~~~al~~G~-~v~~eKP 97 (319)
T 1tlt_A 57 DSLSSL---AASCDAVFVHSSTASHFDVVSTLLNAGV-HVCVDKP 97 (319)
T ss_dssp SSHHHH---HTTCSEEEECSCTTHHHHHHHHHHHTTC-EEEEESS
T ss_pred CcHHHh---hcCCCEEEEeCCchhHHHHHHHHHHcCC-eEEEeCC
Confidence 122222 1368999999999888899999999994 5666544
No 90
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=96.70 E-value=0.0041 Score=60.93 Aligned_cols=94 Identities=19% Similarity=0.264 Sum_probs=60.2
Q ss_pred ceeeEEEEcCChhHHH-HHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEe
Q 012940 85 AKLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (453)
Q Consensus 85 m~ikVaInGfGrIGR~-vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~ 163 (453)
|++||||+|+|.||+. +++.|... ++++|+ |-|. +++....+.+ .+|. .. ..
T Consensus 1 m~~~igiIG~G~ig~~~~~~~l~~~--~~~~l~-v~d~-~~~~~~~~a~---~~g~---~~---------------~~-- 53 (323)
T 1xea_A 1 MSLKIAMIGLGDIAQKAYLPVLAQW--PDIELV-LCTR-NPKVLGTLAT---RYRV---SA---------------TC-- 53 (323)
T ss_dssp -CEEEEEECCCHHHHHTHHHHHTTS--TTEEEE-EECS-CHHHHHHHHH---HTTC---CC---------------CC--
T ss_pred CCcEEEEECCCHHHHHHHHHHHHhC--CCceEE-EEeC-CHHHHHHHHH---HcCC---Cc---------------cc--
Confidence 6789999999999984 88988654 458998 7776 4433322221 0110 00 00
Q ss_pred CCCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 012940 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 164 ~~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap 209 (453)
....+.+ +.++|+|+.||+.....+.+...+++|. .|++--|
T Consensus 54 ~~~~~~l---~~~~D~V~i~tp~~~h~~~~~~al~~Gk-~V~~EKP 95 (323)
T 1xea_A 54 TDYRDVL---QYGVDAVMIHAATDVHSTLAAFFLHLGI-PTFVDKP 95 (323)
T ss_dssp SSTTGGG---GGCCSEEEECSCGGGHHHHHHHHHHTTC-CEEEESC
T ss_pred cCHHHHh---hcCCCEEEEECCchhHHHHHHHHHHCCC-eEEEeCC
Confidence 0111222 2379999999999888899989999994 4666544
No 91
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=96.64 E-value=0.0011 Score=66.50 Aligned_cols=96 Identities=21% Similarity=0.341 Sum_probs=56.8
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCC------CCCceEEEEcCCCChhhh-----hhhhc--cccceeecCceEEEecCCeE
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRK------DSPLDVVVVNDSGGVKNA-----SHLLK--YDSLLGTFKADVKIVDNETI 152 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~------~~~ieiVaInd~~~~~~~-----a~Llk--yDS~~G~f~~~v~~~~~~~l 152 (453)
++||||.|+|.||+.+++.+.++. .++++|++|-|+ +.+.. +..+. |.. ++
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~-~~~~~~~id~~~~~~~~~~~--~~------------- 65 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADS-KSSISGDFSLVEALRMKRET--GM------------- 65 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECS-SCEEESSCCHHHHHHHHHHH--SS-------------
T ss_pred cEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeC-ChHhccccCHHHHHhhhccC--cc-------------
Confidence 389999999999999999998651 046999999886 21110 00010 000 00
Q ss_pred EECCeEEEEEeCCCCCCCCccccCccEEEcCCCCCCC----hhhHHHHHHcCCCEEEEe
Q 012940 153 SVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVD----GPGAGKHIQAGAKKVIIT 207 (453)
Q Consensus 153 ~v~Gk~I~v~~~~dp~~l~W~~~gvDiVie~TG~f~s----~e~a~~hl~aGAkkVIIS 207 (453)
++...+++++ ..+..+|+|++||+.... .+.+..++++|. .||..
T Consensus 66 --------~~~~~d~~~l-l~~~~iDvVv~~tp~~~h~~~a~~~~~~aL~aGk-hVv~~ 114 (327)
T 3do5_A 66 --------LRDDAKAIEV-VRSADYDVLIEASVTRVDGGEGVNYIREALKRGK-HVVTS 114 (327)
T ss_dssp --------CSBCCCHHHH-HHHSCCSEEEECCCCC----CHHHHHHHHHTTTC-EEEEC
T ss_pred --------ccCCCCHHHH-hcCCCCCEEEECCCCcccchhHHHHHHHHHHCCC-eEEec
Confidence 0000011111 112368999999987654 678889999995 44443
No 92
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=96.63 E-value=0.0029 Score=65.25 Aligned_cols=101 Identities=19% Similarity=0.195 Sum_probs=65.0
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhc-cccceeecCceEEEecCCeEEECCeEEEEEe-
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLK-YDSLLGTFKADVKIVDNETISVDGKLIKVVS- 163 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~Llk-yDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~- 163 (453)
++||||+|+|.||+..++.+... +.++|++|-|. +++.+..+.+ +. .+|. + . ..++.
T Consensus 20 ~~rvgiIG~G~~g~~h~~~l~~~--~~~~lvav~d~-~~~~~~~~a~~~~-~~g~-~-~---------------~~~~~~ 78 (444)
T 2ixa_A 20 KVRIAFIAVGLRGQTHVENMARR--DDVEIVAFADP-DPYMVGRAQEILK-KNGK-K-P---------------AKVFGN 78 (444)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTC--TTEEEEEEECS-CHHHHHHHHHHHH-HTTC-C-C---------------CEEECS
T ss_pred CceEEEEecCHHHHHHHHHHHhC--CCcEEEEEEeC-CHHHHHHHHHHHH-hcCC-C-C---------------Cceecc
Confidence 68999999999999999988764 56999999987 4443322211 00 0110 0 0 01111
Q ss_pred -CCCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 012940 164 -NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 164 -~~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap 209 (453)
+.+.+++ ..+.++|+|+-||+.....+.+.+++++|. .|++--|
T Consensus 79 ~~~~~~~l-l~~~~vD~V~i~tp~~~h~~~~~~al~aGk-hV~~EKP 123 (444)
T 2ixa_A 79 GNDDYKNM-LKDKNIDAVFVSSPWEWHHEHGVAAMKAGK-IVGMEVS 123 (444)
T ss_dssp STTTHHHH-TTCTTCCEEEECCCGGGHHHHHHHHHHTTC-EEEECCC
T ss_pred CCCCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCCC-eEEEeCC
Confidence 0122222 112369999999999999999999999994 6776444
No 93
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=96.60 E-value=0.003 Score=64.16 Aligned_cols=36 Identities=25% Similarity=0.423 Sum_probs=30.4
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCC-CCCceEEEEcCC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRK-DSPLDVVVVNDS 121 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~-~~~ieiVaInd~ 121 (453)
++||||.|+|.||+.+++.+.++. ..+++|++|-|.
T Consensus 4 ~i~vgIiG~G~VG~~~~~~l~~~~~g~~~~vvaV~d~ 40 (358)
T 1ebf_A 4 VVNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEA 40 (358)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECS
T ss_pred eEEEEEEecCHHHHHHHHHHHhcCCCCCEEEEEEEEC
Confidence 589999999999999999998753 225899999874
No 94
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=96.59 E-value=0.0023 Score=64.00 Aligned_cols=95 Identities=17% Similarity=0.242 Sum_probs=63.7
Q ss_pred eeeEEEEcCChhHHH-HHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeC
Q 012940 86 KLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (453)
Q Consensus 86 ~ikVaInGfGrIGR~-vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~ 164 (453)
++||||+|+|.||+. +++++... ++++|++|-|. +++.+..+.+ .+| + ..++
T Consensus 5 ~~rigiIG~G~~g~~~~~~~l~~~--~~~~l~av~d~-~~~~~~~~a~---~~~-----------------~--~~~~-- 57 (359)
T 3m2t_A 5 LIKVGLVGIGAQMQENLLPSLLQM--QDIRIVAACDS-DLERARRVHR---FIS-----------------D--IPVL-- 57 (359)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTC--TTEEEEEEECS-SHHHHGGGGG---TSC-----------------S--CCEE--
T ss_pred cceEEEECCCHHHHHHHHHHHHhC--CCcEEEEEEcC-CHHHHHHHHH---hcC-----------------C--Cccc--
Confidence 589999999999995 88988765 46999999886 4443322221 010 0 0111
Q ss_pred CCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 012940 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 165 ~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap 209 (453)
.+.+++- .+.++|+|+-||+.....+.+..++++| |.|++--|
T Consensus 58 ~~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKP 100 (359)
T 3m2t_A 58 DNVPAML-NQVPLDAVVMAGPPQLHFEMGLLAMSKG-VNVFVEKP 100 (359)
T ss_dssp SSHHHHH-HHSCCSEEEECSCHHHHHHHHHHHHHTT-CEEEECSC
T ss_pred CCHHHHh-cCCCCCEEEEcCCcHHHHHHHHHHHHCC-CeEEEECC
Confidence 1222221 1236899999999998889999999999 46777555
No 95
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=96.58 E-value=0.0022 Score=63.67 Aligned_cols=87 Identities=22% Similarity=0.201 Sum_probs=61.9
Q ss_pred eeeEEEEcCChhHH-HHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeC
Q 012940 86 KLKVAINGFGRIGR-NFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (453)
Q Consensus 86 ~ikVaInGfGrIGR-~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~ 164 (453)
++||||+|+|.||+ ..++++... ++++|++|-|. +.+. + | +.++
T Consensus 25 ~~rvgiiG~G~ig~~~~~~~l~~~--~~~~lvav~d~-~~~~------~----------------------g--~~~~-- 69 (330)
T 4ew6_A 25 PINLAIVGVGKIVRDQHLPSIAKN--ANFKLVATASR-HGTV------E----------------------G--VNSY-- 69 (330)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHHC--TTEEEEEEECS-SCCC------T----------------------T--SEEE--
T ss_pred CceEEEEecCHHHHHHHHHHHHhC--CCeEEEEEEeC-Chhh------c----------------------C--CCcc--
Confidence 58999999999999 799998875 56999999886 1110 0 1 1111
Q ss_pred CCCCCCCccc-cCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 012940 165 RDPLQLPWAE-LGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 165 ~dp~~l~W~~-~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap 209 (453)
.+.+++- .+ .++|+|+-||+...-.+.+.+++++| |.|++--|
T Consensus 70 ~~~~~ll-~~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKP 113 (330)
T 4ew6_A 70 TTIEAML-DAEPSIDAVSLCMPPQYRYEAAYKALVAG-KHVFLEKP 113 (330)
T ss_dssp SSHHHHH-HHCTTCCEEEECSCHHHHHHHHHHHHHTT-CEEEECSS
T ss_pred CCHHHHH-hCCCCCCEEEEeCCcHHHHHHHHHHHHcC-CcEEEeCC
Confidence 1222221 11 26899999999998899999999999 57777555
No 96
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=96.47 E-value=0.0039 Score=61.80 Aligned_cols=96 Identities=21% Similarity=0.232 Sum_probs=64.9
Q ss_pred eeeEEEEcCC-hhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeC
Q 012940 86 KLKVAINGFG-RIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (453)
Q Consensus 86 ~ikVaInGfG-rIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~ 164 (453)
++||||+|+| .+|+..++.+.... +.++|++|-|. +++....+.+ .||. . .++
T Consensus 18 ~irvgiIG~G~~~g~~~~~~l~~~~-~~~~lvav~d~-~~~~~~~~a~---~~~~---~----------------~~~-- 71 (340)
T 1zh8_A 18 KIRLGIVGCGIAARELHLPALKNLS-HLFEITAVTSR-TRSHAEEFAK---MVGN---P----------------AVF-- 71 (340)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTTT-TTEEEEEEECS-SHHHHHHHHH---HHSS---C----------------EEE--
T ss_pred ceeEEEEecCHHHHHHHHHHHHhCC-CceEEEEEEcC-CHHHHHHHHH---HhCC---C----------------ccc--
Confidence 5899999999 89999999987541 46999999987 4443322221 1110 0 111
Q ss_pred CCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 012940 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 165 ~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap 209 (453)
.+.+++ ..+.++|+|+-||+...-.+.+..++++| |.|++--|
T Consensus 72 ~~~~~l-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKP 114 (340)
T 1zh8_A 72 DSYEEL-LESGLVDAVDLTLPVELNLPFIEKALRKG-VHVICEKP 114 (340)
T ss_dssp SCHHHH-HHSSCCSEEEECCCGGGHHHHHHHHHHTT-CEEEEESS
T ss_pred CCHHHH-hcCCCCCEEEEeCCchHHHHHHHHHHHCC-CcEEEeCC
Confidence 111111 11226899999999998899999999999 46777555
No 97
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=96.47 E-value=0.0027 Score=61.80 Aligned_cols=92 Identities=12% Similarity=0.125 Sum_probs=62.4
Q ss_pred eeeEEEEcCChhHHH-HHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeC
Q 012940 86 KLKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (453)
Q Consensus 86 ~ikVaInGfGrIGR~-vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~ 164 (453)
++||||+|+|.||+. +++.+... +++++++|-|. +++.+..+.+ .||. .. +
T Consensus 6 ~~~igiIG~G~~g~~~~~~~l~~~--~~~~l~av~d~-~~~~~~~~a~---~~~~---~~---------~---------- 57 (308)
T 3uuw_A 6 NIKMGMIGLGSIAQKAYLPILTKS--ERFEFVGAFTP-NKVKREKICS---DYRI---MP---------F---------- 57 (308)
T ss_dssp CCEEEEECCSHHHHHHTHHHHTSC--SSSEEEEEECS-CHHHHHHHHH---HHTC---CB---------C----------
T ss_pred cCcEEEEecCHHHHHHHHHHHHhC--CCeEEEEEECC-CHHHHHHHHH---HcCC---CC---------c----------
Confidence 589999999999996 88888654 46899999886 4443322221 0110 00 0
Q ss_pred CCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 012940 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 165 ~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap 209 (453)
.+.+++- + ++|+|+-||+.....+.+...+++|. .|++--|
T Consensus 58 ~~~~~ll--~-~~D~V~i~tp~~~h~~~~~~al~~gk-~vl~EKP 98 (308)
T 3uuw_A 58 DSIESLA--K-KCDCIFLHSSTETHYEIIKILLNLGV-HVYVDKP 98 (308)
T ss_dssp SCHHHHH--T-TCSEEEECCCGGGHHHHHHHHHHTTC-EEEECSS
T ss_pred CCHHHHH--h-cCCEEEEeCCcHhHHHHHHHHHHCCC-cEEEcCC
Confidence 1121111 1 58999999999999999999999994 5777545
No 98
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=96.47 E-value=0.0047 Score=63.67 Aligned_cols=99 Identities=18% Similarity=0.152 Sum_probs=63.7
Q ss_pred eeeEEEEcCChhHH-HHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeC
Q 012940 86 KLKVAINGFGRIGR-NFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (453)
Q Consensus 86 ~ikVaInGfGrIGR-~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~ 164 (453)
++||||+|+|.||+ .+++.|.+. ++++||+|-|. +.+....+.+ .||.-.. .+.+ .
T Consensus 83 ~irigiIG~G~~g~~~~~~~l~~~--~~~~lvav~d~-~~~~~~~~a~---~~g~~~~---------------~~~~--~ 139 (433)
T 1h6d_A 83 RFGYAIVGLGKYALNQILPGFAGC--QHSRIEALVSG-NAEKAKIVAA---EYGVDPR---------------KIYD--Y 139 (433)
T ss_dssp CEEEEEECCSHHHHHTHHHHTTTC--SSEEEEEEECS-CHHHHHHHHH---HTTCCGG---------------GEEC--S
T ss_pred ceEEEEECCcHHHHHHHHHHHhhC--CCcEEEEEEcC-CHHHHHHHHH---HhCCCcc---------------cccc--c
Confidence 68999999999997 888988654 46899999886 4333222211 1111000 0111 1
Q ss_pred CCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 012940 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 165 ~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap 209 (453)
.+.+++- .+.++|+|+.||+.....+.+..++++| |.|++--|
T Consensus 140 ~~~~~ll-~~~~vD~V~iatp~~~h~~~~~~al~aG-k~Vl~EKP 182 (433)
T 1h6d_A 140 SNFDKIA-KDPKIDAVYIILPNSLHAEFAIRAFKAG-KHVMCEKP 182 (433)
T ss_dssp SSGGGGG-GCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSS
T ss_pred CCHHHHh-cCCCCCEEEEcCCchhHHHHHHHHHHCC-CcEEEcCC
Confidence 2233331 1236999999999999999999999999 46776444
No 99
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=96.41 E-value=0.0047 Score=60.33 Aligned_cols=99 Identities=21% Similarity=0.273 Sum_probs=60.1
Q ss_pred eeeEEEEcC-ChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeC
Q 012940 86 KLKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (453)
Q Consensus 86 ~ikVaInGf-GrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~ 164 (453)
+|||+|+|. |++||.+++.+.+. ++++||++-|... +. +...|. |.+.+- . . .| +.+.
T Consensus 5 ~mkV~V~Ga~G~mG~~~~~~~~~~--~~~elva~~d~~~-~~---~~g~d~--~~~~g~-~--~------~~--v~~~-- 63 (273)
T 1dih_A 5 NIRVAIAGAGGRMGRQLIQAALAL--EGVQLGAALEREG-SS---LLGSDA--GELAGA-G--K------TG--VTVQ-- 63 (273)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHS--TTEECCCEECCTT-CT---TCSCCT--TCSSSS-S--C------CS--CCEE--
T ss_pred CcEEEEECCCCHHHHHHHHHHHhC--CCCEEEEEEecCc-hh---hhhhhH--HHHcCC-C--c------CC--ceec--
Confidence 479999995 99999999988765 4589988766411 10 000010 110000 0 0 01 2232
Q ss_pred CCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 012940 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 165 ~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap 209 (453)
.+++.+- . ++|+|||+|......+.+...+++|. .+|+..+
T Consensus 64 ~dl~~~l-~--~~DvVIDft~p~~~~~~~~~a~~~G~-~vVigTt 104 (273)
T 1dih_A 64 SSLDAVK-D--DFDVFIDFTRPEGTLNHLAFCRQHGK-GMVIGTT 104 (273)
T ss_dssp SCSTTTT-T--SCSEEEECSCHHHHHHHHHHHHHTTC-EEEECCC
T ss_pred CCHHHHh-c--CCCEEEEcCChHHHHHHHHHHHhCCC-CEEEECC
Confidence 3444332 1 68999988877777788888999997 4666444
No 100
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=96.40 E-value=0.0021 Score=62.59 Aligned_cols=135 Identities=16% Similarity=0.165 Sum_probs=78.5
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeCC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~~ 165 (453)
.|||+|.|||.|||.++|. + ++|++++-+ +. .+ .| |- .+ ..
T Consensus 12 ~~rV~i~G~GaIG~~v~~~---~---~leLv~v~~----~k---------------------~g-el---gv--~a--~~ 52 (253)
T 1j5p_A 12 HMTVLIIGMGNIGKKLVEL---G---NFEKIYAYD----RI---------------------SK-DI---PG--VV--RL 52 (253)
T ss_dssp CCEEEEECCSHHHHHHHHH---S---CCSEEEEEC----SS---------------------CC-CC---SS--SE--EC
T ss_pred cceEEEECcCHHHHHHHhc---C---CcEEEEEEe----cc---------------------cc-cc---Cc--ee--eC
Confidence 4799999999999999997 2 489988754 10 01 11 21 22 14
Q ss_pred CCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEeccCccccCccCCeE-E-ecCCcchh
Q 012940 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEKDYDHEVANI-V-SNASCTTN 243 (453)
Q Consensus 166 dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISaps~d~dvPtvV~gVN~~~~~~~~~~I-V-SnaSCTTn 243 (453)
|.+.+.. +.|+|+||++...-.++..+.|++|.. ||++....-.| |-+.-.+....-... .+| + |-+..--.
T Consensus 53 d~d~lla---~pD~VVe~A~~~av~e~~~~iL~aG~d-vv~~S~gaLad-~~l~~~L~~aA~~gg-~~l~vpSGAi~GlD 126 (253)
T 1j5p_A 53 DEFQVPS---DVSTVVECASPEAVKEYSLQILKNPVN-YIIISTSAFAD-EVFRERFFSELKNSP-ARVFFPSGAIGGLD 126 (253)
T ss_dssp SSCCCCT---TCCEEEECSCHHHHHHHHHHHTTSSSE-EEECCGGGGGS-HHHHHHHHHHHHTCS-CEEECCCTTCCCHH
T ss_pred CHHHHhh---CCCEEEECCCHHHHHHHHHHHHHCCCC-EEEcChhhhcC-HHHHHHHHHHHHHCC-CeEEecCCcccchh
Confidence 6677763 689999999988777788999999984 44443321001 100000000000111 233 2 33333322
Q ss_pred hhhhHHHHHhhhcCeeEEEEEeeecccc
Q 012940 244 CLAPFVKVMDEELGIVKGAMTTTHSYTG 271 (453)
Q Consensus 244 ~Lapvlk~L~d~fGI~~~~mTTiha~Tg 271 (453)
+ |+... -+|+++.++|+-+..+
T Consensus 127 ~----l~aa~--g~l~~V~~~t~K~P~~ 148 (253)
T 1j5p_A 127 V----LSSIK--DFVKNVRIETIKPPKS 148 (253)
T ss_dssp H----HHHHG--GGEEEEEEEEEECGGG
T ss_pred H----HHHhc--CCccEEEEEEeCChHH
Confidence 2 23323 6899999999988754
No 101
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=96.12 E-value=0.0074 Score=58.83 Aligned_cols=90 Identities=22% Similarity=0.239 Sum_probs=60.4
Q ss_pred eeeEEEEcCChhHHHHHHHHHhC-CCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGR-KDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r-~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~ 164 (453)
++||||+|+|.||+..++.+... ..+.+++++|-|... + .. . . | +..
T Consensus 7 ~~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~-------~--a~---------~--~-------g--~~~--- 54 (294)
T 1lc0_A 7 KFGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRRE-------L--GS---------L--D-------E--VRQ--- 54 (294)
T ss_dssp SEEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSC-------C--CE---------E--T-------T--EEB---
T ss_pred cceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchH-------H--HH---------H--c-------C--CCC---
Confidence 58999999999999999987641 024589999987510 0 00 0 0 1 010
Q ss_pred CCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 012940 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 165 ~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap 209 (453)
.+.+++ ..+.++|+|+.||+.....+.+..++++| |.|++--|
T Consensus 55 ~~~~el-l~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKP 97 (294)
T 1lc0_A 55 ISLEDA-LRSQEIDVAYICSESSSHEDYIRQFLQAG-KHVLVEYP 97 (294)
T ss_dssp CCHHHH-HHCSSEEEEEECSCGGGHHHHHHHHHHTT-CEEEEESC
T ss_pred CCHHHH-hcCCCCCEEEEeCCcHhHHHHHHHHHHCC-CcEEEeCC
Confidence 122221 11236999999999999999999999999 46777544
No 102
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=96.11 E-value=0.0014 Score=64.74 Aligned_cols=96 Identities=11% Similarity=0.082 Sum_probs=62.0
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCC---hhhhhhhhccccceeecCceEEEecCCeEEECCeEEEE
Q 012940 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGG---VKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKV 161 (453)
Q Consensus 85 m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~---~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v 161 (453)
|++||||+|+|.+|+..++++ . +.++|++|-|... .+.++..++ .||. . .++
T Consensus 1 M~~rvgiiG~G~~~~~~~~~l--~--~~~~lvav~d~~~~~~~~~~~~~~~---~~~~---~---------------~~~ 55 (337)
T 3ip3_A 1 MSLKICVIGSSGHFRYALEGL--D--EECSITGIAPGVPEEDLSKLEKAIS---EMNI---K---------------PKK 55 (337)
T ss_dssp -CEEEEEECSSSCHHHHHTTC--C--TTEEEEEEECSSTTCCCHHHHHHHH---TTTC---C---------------CEE
T ss_pred CceEEEEEccchhHHHHHHhc--C--CCcEEEEEecCCchhhHHHHHHHHH---HcCC---C---------------Ccc
Confidence 779999999999999888877 2 5699999998621 222222221 0110 0 011
Q ss_pred EeCCCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 012940 162 VSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 162 ~~~~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap 209 (453)
+ .+.+++ ..+.++|+|+-||....-.+.+..++++| |.|++--|
T Consensus 56 ~--~~~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aG-khVl~EKP 99 (337)
T 3ip3_A 56 Y--NNWWEM-LEKEKPDILVINTVFSLNGKILLEALERK-IHAFVEKP 99 (337)
T ss_dssp C--SSHHHH-HHHHCCSEEEECSSHHHHHHHHHHHHHTT-CEEEECSS
T ss_pred c--CCHHHH-hcCCCCCEEEEeCCcchHHHHHHHHHHCC-CcEEEeCC
Confidence 1 122222 11236899999999998889999999999 46777555
No 103
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=95.85 E-value=0.0081 Score=60.18 Aligned_cols=94 Identities=13% Similarity=0.197 Sum_probs=61.7
Q ss_pred eeeEEEEcCChhHH-HHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeC
Q 012940 86 KLKVAINGFGRIGR-NFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (453)
Q Consensus 86 ~ikVaInGfGrIGR-~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~ 164 (453)
++||||+|+|.+|+ .+++++.. ++++|++|-|. +++....+.+ .||. . .++
T Consensus 26 ~irvgiiG~G~~~~~~~~~~~~~---~~~~lvav~d~-~~~~a~~~a~---~~~~----~---------------~~~-- 77 (361)
T 3u3x_A 26 ELRFAAVGLNHNHIYGQVNCLLR---AGARLAGFHEK-DDALAAEFSA---VYAD----A---------------RRI-- 77 (361)
T ss_dssp CCEEEEECCCSTTHHHHHHHHHH---TTCEEEEEECS-CHHHHHHHHH---HSSS----C---------------CEE--
T ss_pred CcEEEEECcCHHHHHHHHHHhhc---CCcEEEEEEcC-CHHHHHHHHH---HcCC----C---------------ccc--
Confidence 68999999999995 45666653 45899999987 4443322221 1110 0 011
Q ss_pred CCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 012940 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 165 ~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap 209 (453)
.+.+++ ..+.++|+|+-||+...-.+.+..++++| |.|++--|
T Consensus 78 ~~~~~l-l~~~~vD~V~I~tp~~~H~~~~~~al~aG-khVl~EKP 120 (361)
T 3u3x_A 78 ATAEEI-LEDENIGLIVSAAVSSERAELAIRAMQHG-KDVLVDKP 120 (361)
T ss_dssp SCHHHH-HTCTTCCEEEECCCHHHHHHHHHHHHHTT-CEEEEESC
T ss_pred CCHHHH-hcCCCCCEEEEeCChHHHHHHHHHHHHCC-CeEEEeCC
Confidence 111111 11226899999999999999999999999 57777665
No 104
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=95.81 E-value=0.014 Score=56.97 Aligned_cols=93 Identities=19% Similarity=0.213 Sum_probs=59.8
Q ss_pred eeEEEEcCChhHHHH-HHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeCC
Q 012940 87 LKVAINGFGRIGRNF-LRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (453)
Q Consensus 87 ikVaInGfGrIGR~v-lr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~~ 165 (453)
|||||+|+|.+|+.+ ++.+.. +.+++++|-|. +++....+.+ .+|. . . ++ .
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~---~~~~~vav~d~-~~~~~~~~~~---~~g~---~-~---------------~~--~ 52 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRA---TGGEVVSMMST-SAERGAAYAT---ENGI---G-K---------------SV--T 52 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHH---TTCEEEEEECS-CHHHHHHHHH---HTTC---S-C---------------CB--S
T ss_pred CeEEEEcccHHHHHhhhHHhhc---CCCeEEEEECC-CHHHHHHHHH---HcCC---C-c---------------cc--C
Confidence 589999999999998 788875 35899999886 4433322221 0110 0 0 00 1
Q ss_pred CCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 012940 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 166 dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap 209 (453)
+.+++ ..+.++|+|+.||+.....+.+..++++| |.|++--|
T Consensus 53 ~~~~~-l~~~~~D~V~i~tp~~~h~~~~~~al~~G-k~v~~ekP 94 (332)
T 2glx_A 53 SVEEL-VGDPDVDAVYVSTTNELHREQTLAAIRAG-KHVLCEKP 94 (332)
T ss_dssp CHHHH-HTCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSS
T ss_pred CHHHH-hcCCCCCEEEEeCChhHhHHHHHHHHHCC-CeEEEeCC
Confidence 11111 01125899999999988889999999999 45666444
No 105
>1r0k_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH dependent, fosmidomycin, non- mevalonate pathway, oxidoreductase; 1.91A {Zymomonas mobilis} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1r0l_A*
Probab=95.49 E-value=0.014 Score=60.18 Aligned_cols=110 Identities=15% Similarity=0.178 Sum_probs=59.1
Q ss_pred eeEEEEcC-ChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhh-ccccceeecCceEEEecCCe---EE--ECCeEE
Q 012940 87 LKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLL-KYDSLLGTFKADVKIVDNET---IS--VDGKLI 159 (453)
Q Consensus 87 ikVaInGf-GrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~Ll-kyDS~~G~f~~~v~~~~~~~---l~--v~Gk~I 159 (453)
+||+|.|+ |.||+.+++++..++ ..++++++.--.+.+.+.... +|... .+.+.+.+. +. +.+..+
T Consensus 5 ~rI~ILGsTGSIG~~~l~vi~~~p-~~~~v~al~ag~ni~~l~~~~~~f~~~------~v~v~d~~~~~~l~~~l~~~~~ 77 (388)
T 1r0k_A 5 RTVTVLGATGSIGHSTLDLIERNL-DRYQVIALTANRNVKDLADAAKRTNAK------RAVIADPSLYNDLKEALAGSSV 77 (388)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTG-GGEEEEEEEESSCHHHHHHHHHHTTCS------EEEESCGGGHHHHHHHTTTCSS
T ss_pred eEEEEECCCeEeHHHHHHHHHhCc-CcEEEEEEEcCCCHHHHHHHHHHcCCc------EEEEcChHHHHHHHHHhccCCc
Confidence 79999996 999999999998752 248999883222444333322 12211 111000000 00 011011
Q ss_pred EEEeC-CCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEE
Q 012940 160 KVVSN-RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVII 206 (453)
Q Consensus 160 ~v~~~-~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVII 206 (453)
.++.. .+..++- ... +|+|+++++.+...+.+-+++++| |.|+.
T Consensus 78 ~v~~g~~~~~el~-~~~-iDvVV~ai~G~aGl~ptlaAi~aG-K~Vvl 122 (388)
T 1r0k_A 78 EAAAGADALVEAA-MMG-ADWTMAAIIGCAGLKATLAAIRKG-KTVAL 122 (388)
T ss_dssp EEEESHHHHHHHH-TSC-CSEEEECCCSGGGHHHHHHHHHTT-SEEEE
T ss_pred EEEeCccHHHHHH-cCC-CCEEEEeCCCHHHHHHHHHHHHCC-CEEEE
Confidence 22211 1111111 112 799999995566778888899999 55544
No 106
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=95.49 E-value=0.018 Score=58.93 Aligned_cols=97 Identities=22% Similarity=0.224 Sum_probs=61.7
Q ss_pred eeeEEEEcCCh---hHHHHHHHHHhCCCCCceEEE-EcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEE
Q 012940 86 KLKVAINGFGR---IGRNFLRCWHGRKDSPLDVVV-VNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKV 161 (453)
Q Consensus 86 ~ikVaInGfGr---IGR~vlr~l~~r~~~~ieiVa-Ind~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v 161 (453)
++||||+|+|+ ||+..++++... +.++||+ |-|. +++....+.+ .+|. +.. . +
T Consensus 37 ~~rvgiiG~G~~~~ig~~h~~~~~~~--~~~~lva~v~d~-~~~~a~~~a~---~~g~-~~~-~---------------~ 93 (417)
T 3v5n_A 37 RIRLGMVGGGSGAFIGAVHRIAARLD--DHYELVAGALSS-TPEKAEASGR---ELGL-DPS-R---------------V 93 (417)
T ss_dssp CEEEEEESCC--CHHHHHHHHHHHHT--SCEEEEEEECCS-SHHHHHHHHH---HHTC-CGG-G---------------B
T ss_pred cceEEEEcCCCchHHHHHHHHHHhhC--CCcEEEEEEeCC-CHHHHHHHHH---HcCC-Ccc-c---------------c
Confidence 68999999999 999998887654 4589997 8776 4443322221 0110 000 0 0
Q ss_pred EeCCCCCCCCccc-----cCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 012940 162 VSNRDPLQLPWAE-----LGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 162 ~~~~dp~~l~W~~-----~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap 209 (453)
+ .+.+++- .+ .++|+|+-||+...-.+.+..++++| |.|++--|
T Consensus 94 ~--~~~~~ll-~~~~~~~~~vD~V~I~tp~~~H~~~~~~al~aG-khVl~EKP 142 (417)
T 3v5n_A 94 Y--SDFKEMA-IREAKLKNGIEAVAIVTPNHVHYAAAKEFLKRG-IHVICDKP 142 (417)
T ss_dssp C--SCHHHHH-HHHHHCTTCCSEEEECSCTTSHHHHHHHHHTTT-CEEEEESS
T ss_pred c--CCHHHHH-hcccccCCCCcEEEECCCcHHHHHHHHHHHhCC-CeEEEECC
Confidence 0 1111110 11 25899999999999999999999999 46777655
No 107
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=95.49 E-value=0.025 Score=55.58 Aligned_cols=94 Identities=16% Similarity=0.233 Sum_probs=62.3
Q ss_pred eeeEEEEcC-ChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeC
Q 012940 86 KLKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (453)
Q Consensus 86 ~ikVaInGf-GrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~ 164 (453)
++||||+|+ |.||+..++++... +.++|+|-|.. .+. +. + +..+ + + .+++
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~---~~~lvav~d~~-~~~-~~-~--~~~~---~--------------~--~~~~-- 53 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEV---GGVLVASLDPA-TNV-GL-V--DSFF---P--------------E--AEFF-- 53 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHT---TCEEEEEECSS-CCC-GG-G--GGTC---T--------------T--CEEE--
T ss_pred ceEEEEECCChHHHHHHHHHHHhC---CCEEEEEEcCC-HHH-HH-H--HhhC---C--------------C--Ccee--
Confidence 379999999 79999999999874 37999999862 221 11 1 1101 1 0 0111
Q ss_pred CCCCCCC-----c--cccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 012940 165 RDPLQLP-----W--AELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 165 ~dp~~l~-----W--~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap 209 (453)
.+.+++. | .+.++|+|+-||+.....+.+..++++| |.|++--|
T Consensus 54 ~~~~~ll~~~~~l~~~~~~vD~V~I~tP~~~H~~~~~~al~aG-khVl~EKP 104 (312)
T 3o9z_A 54 TEPEAFEAYLEDLRDRGEGVDYLSIASPNHLHYPQIRMALRLG-ANALSEKP 104 (312)
T ss_dssp SCHHHHHHHHHHHHHTTCCCSEEEECSCGGGHHHHHHHHHHTT-CEEEECSS
T ss_pred CCHHHHHHHhhhhcccCCCCcEEEECCCchhhHHHHHHHHHCC-CeEEEECC
Confidence 1111110 0 1237999999999999999999999999 56777544
No 108
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=95.45 E-value=0.022 Score=56.13 Aligned_cols=94 Identities=17% Similarity=0.137 Sum_probs=62.5
Q ss_pred eeeEEEEcC-ChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeC
Q 012940 86 KLKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (453)
Q Consensus 86 ~ikVaInGf-GrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~ 164 (453)
|+||||+|+ |.||+..++++... +.++++|-|.. .+. +. + +..+ +. .+++
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~---~~~lvav~d~~-~~~-~~-~--~~~~---~~----------------~~~~-- 53 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDT---GNCLVSAYDIN-DSV-GI-I--DSIS---PQ----------------SEFF-- 53 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHT---TCEEEEEECSS-CCC-GG-G--GGTC---TT----------------CEEE--
T ss_pred ceEEEEECCCcHHHHHHHHHHHhC---CCEEEEEEcCC-HHH-HH-H--HhhC---CC----------------CcEE--
Confidence 479999999 79999999999864 37999999862 221 11 1 1101 10 0111
Q ss_pred CCCCCCC--------ccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 012940 165 RDPLQLP--------WAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 165 ~dp~~l~--------W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap 209 (453)
.+.+++. ..+.++|+|+-||+.....+.+..++++| |.|++--|
T Consensus 54 ~~~~~ll~~~~~l~~~~~~~vD~V~I~tP~~~H~~~~~~al~aG-khVl~EKP 105 (318)
T 3oa2_A 54 TEFEFFLDHASNLKRDSATALDYVSICSPNYLHYPHIAAGLRLG-CDVICEKP 105 (318)
T ss_dssp SSHHHHHHHHHHHTTSTTTSCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSS
T ss_pred CCHHHHHHhhhhhhhccCCCCcEEEECCCcHHHHHHHHHHHHCC-CeEEEECC
Confidence 1111110 01247999999999999999999999999 56777555
No 109
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=95.44 E-value=0.034 Score=56.55 Aligned_cols=92 Identities=24% Similarity=0.266 Sum_probs=58.5
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeCC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~~ 165 (453)
++||||+|+| +|+.-++++.... +.++||||-|. +.+....+-+ .|| ++++ .
T Consensus 7 ~~rv~VvG~G-~g~~h~~a~~~~~-~~~elvav~~~-~~~~a~~~a~---~~g--------------------v~~~--~ 58 (372)
T 4gmf_A 7 KQRVLIVGAK-FGEMYLNAFMQPP-EGLELVGLLAQ-GSARSRELAH---AFG--------------------IPLY--T 58 (372)
T ss_dssp CEEEEEECST-TTHHHHHTTSSCC-TTEEEEEEECC-SSHHHHHHHH---HTT--------------------CCEE--S
T ss_pred CCEEEEEehH-HHHHHHHHHHhCC-CCeEEEEEECC-CHHHHHHHHH---HhC--------------------CCEE--C
Confidence 6899999999 7999888876542 35999999987 3332211111 111 1111 2
Q ss_pred CCCCCCccccCccEEEcCCCCCCC----hhhHHHHHHcCCCEEEEeCC
Q 012940 166 DPLQLPWAELGIDIVIEGTGVFVD----GPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 166 dp~~l~W~~~gvDiVie~TG~f~s----~e~a~~hl~aGAkkVIISap 209 (453)
+.+++. .++|+|+=||....- .+.+.+.+++|. .|++--|
T Consensus 59 ~~~~l~---~~~D~v~i~~p~~~h~~~~~~~a~~al~aGk-hVl~EKP 102 (372)
T 4gmf_A 59 SPEQIT---GMPDIACIVVRSTVAGGAGTQLARHFLARGV-HVIQEHP 102 (372)
T ss_dssp SGGGCC---SCCSEEEECCC--CTTSHHHHHHHHHHHTTC-EEEEESC
T ss_pred CHHHHh---cCCCEEEEECCCcccchhHHHHHHHHHHcCC-cEEEecC
Confidence 333332 158888889987766 678899999994 6777444
No 110
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=95.39 E-value=0.019 Score=54.14 Aligned_cols=94 Identities=19% Similarity=0.166 Sum_probs=61.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeCCC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~~d 166 (453)
.||+|+|.|.+|+.+++.+... . .+++|++-|. +++.. + -.++|.++. ...+
T Consensus 81 ~rV~IIGaG~~G~~la~~~~~~-~-g~~iVg~~D~-dp~k~---------------------g--~~i~gv~V~--~~~d 132 (211)
T 2dt5_A 81 WGLCIVGMGRLGSALADYPGFG-E-SFELRGFFDV-DPEKV---------------------G--RPVRGGVIE--HVDL 132 (211)
T ss_dssp EEEEEECCSHHHHHHHHCSCCC-S-SEEEEEEEES-CTTTT---------------------T--CEETTEEEE--EGGG
T ss_pred CEEEEECccHHHHHHHHhHhhc-C-CcEEEEEEeC-CHHHH---------------------h--hhhcCCeee--cHHh
Confidence 6899999999999999863322 3 6899998764 22111 1 113443332 2233
Q ss_pred CCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCC
Q 012940 167 PLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (453)
Q Consensus 167 p~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISaps 210 (453)
.+++ ..+ ++|+|+-|++.....+.+...+++|.+-++.-.|.
T Consensus 133 l~el-l~~-~ID~ViIA~Ps~~~~ei~~~l~~aGi~~Ilnf~P~ 174 (211)
T 2dt5_A 133 LPQR-VPG-RIEIALLTVPREAAQKAADLLVAAGIKGILNFAPV 174 (211)
T ss_dssp HHHH-STT-TCCEEEECSCHHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred HHHH-HHc-CCCEEEEeCCchhHHHHHHHHHHcCCCEEEECCcc
Confidence 3322 134 79999999998877788888899998655444664
No 111
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=95.35 E-value=0.029 Score=55.10 Aligned_cols=93 Identities=17% Similarity=0.189 Sum_probs=59.6
Q ss_pred eeeEEEEcCChhHH-HHHHHHHhCCCCCceEEEEcCCCChhhhhhhh-ccccceeecCceEEEecCCeEEECCeEEEEEe
Q 012940 86 KLKVAINGFGRIGR-NFLRCWHGRKDSPLDVVVVNDSGGVKNASHLL-KYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (453)
Q Consensus 86 ~ikVaInGfGrIGR-~vlr~l~~r~~~~ieiVaInd~~~~~~~a~Ll-kyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~ 163 (453)
++||||+|+|.+|. .+++.+.. ++++|++|-|. +++....+- +|. + +. ++
T Consensus 4 ~~rvgiiG~G~~~~~~~~~~l~~---~~~~lvav~d~-~~~~~~~~a~~~~-------~-~~---------------~~- 55 (336)
T 2p2s_A 4 KIRFAAIGLAHNHIYDMCQQLID---AGAELAGVFES-DSDNRAKFTSLFP-------S-VP---------------FA- 55 (336)
T ss_dssp CCEEEEECCSSTHHHHHHHHHHH---TTCEEEEEECS-CTTSCHHHHHHST-------T-CC---------------BC-
T ss_pred ccEEEEECCChHHHHHhhhhhcC---CCcEEEEEeCC-CHHHHHHHHHhcC-------C-Cc---------------cc-
Confidence 58999999999996 67777743 35899999886 332221111 110 0 00 00
Q ss_pred CCCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 012940 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 164 ~~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap 209 (453)
.+.+++ ..+.++|+|+-||+.....+.+..++++| |.|++--|
T Consensus 56 -~~~~~l-l~~~~~D~V~i~tp~~~h~~~~~~al~aG-khVl~EKP 98 (336)
T 2p2s_A 56 -ASAEQL-ITDASIDLIACAVIPCDRAELALRTLDAG-KDFFTAKP 98 (336)
T ss_dssp -SCHHHH-HTCTTCCEEEECSCGGGHHHHHHHHHHTT-CEEEECSS
T ss_pred -CCHHHH-hhCCCCCEEEEeCChhhHHHHHHHHHHCC-CcEEEeCC
Confidence 111111 11126899999999999999999999999 46777544
No 112
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=95.20 E-value=0.018 Score=60.20 Aligned_cols=99 Identities=10% Similarity=0.134 Sum_probs=65.3
Q ss_pred eeeEEEEcC----ChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEE
Q 012940 86 KLKVAINGF----GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKV 161 (453)
Q Consensus 86 ~ikVaInGf----GrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v 161 (453)
++||||+|+ |.+|+..+++|.... +.++||+|-|. +++....+.+ .||. + + +.+
T Consensus 39 ~irvgiIG~g~~GG~~g~~h~~~l~~~~-~~~~lvav~d~-~~~~a~~~a~---~~g~-~-------~---------~~~ 96 (479)
T 2nvw_A 39 PIRVGFVGLTSGKSWVAKTHFLAIQQLS-SQFQIVALYNP-TLKSSLQTIE---QLQL-K-------H---------ATG 96 (479)
T ss_dssp CEEEEEECCCSTTSHHHHTHHHHHHHTT-TTEEEEEEECS-CHHHHHHHHH---HTTC-T-------T---------CEE
T ss_pred cCEEEEEcccCCCCHHHHHHHHHHHhcC-CCeEEEEEEeC-CHHHHHHHHH---HcCC-C-------c---------cee
Confidence 589999999 999999999997641 45899999986 4433222211 0110 0 0 011
Q ss_pred EeCCCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCC-----CEEEEeCC
Q 012940 162 VSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGA-----KKVIITAP 209 (453)
Q Consensus 162 ~~~~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGA-----kkVIISap 209 (453)
+ .+.+++ ..+.++|+|+-||+.....+.+..++++|. |.|++--|
T Consensus 97 ~--~d~~el-l~~~~vD~V~I~tp~~~H~~~~~~al~aG~~~~~~khVl~EKP 146 (479)
T 2nvw_A 97 F--DSLESF-AQYKDIDMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEWA 146 (479)
T ss_dssp E--SCHHHH-HHCTTCSEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEEESS
T ss_pred e--CCHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHHHCCCCcCCceeEEEeCC
Confidence 1 112221 111268999999999988899999999994 67888555
No 113
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=94.78 E-value=0.021 Score=57.19 Aligned_cols=97 Identities=19% Similarity=0.259 Sum_probs=58.8
Q ss_pred ccceeeEEEEc-CChhHHH-HH----HHHHhCCCCCceEE---------EEcCCCChhhhhhhh-ccccceeecCceEEE
Q 012940 83 TVAKLKVAING-FGRIGRN-FL----RCWHGRKDSPLDVV---------VVNDSGGVKNASHLL-KYDSLLGTFKADVKI 146 (453)
Q Consensus 83 ~~m~ikVaInG-fGrIGR~-vl----r~l~~r~~~~ieiV---------aInd~~~~~~~a~Ll-kyDS~~G~f~~~v~~ 146 (453)
+..++||||+| +|++|+. .+ +++.+.. .++++ +|-|. +++....+. +|.. .
T Consensus 3 ~~~~irigiiG~~G~~g~~~h~~~~~~~~~~~~--~~~l~~~~~~~~~~av~~~-~~~~a~~~a~~~~~-------~--- 69 (383)
T 3oqb_A 3 TTQRLGLIMNGVTGRMGLNQHLIRSIVAIRDQG--GVRLKNGDRIMPDPILVGR-SAEKVEALAKRFNI-------A--- 69 (383)
T ss_dssp CCEEEEEEEESTTSTHHHHTTTTTTHHHHHHHT--SEECTTSCEEEEEEEEECS-SSHHHHHHHHHTTC-------C---
T ss_pred CCceeEEEEEeccchhhhhhhHHHHHHHHhhcC--ceeecCCcccceeeEEEcC-CHHHHHHHHHHhCC-------C---
Confidence 34579999999 9999997 66 6665432 23322 56655 333322221 1111 0
Q ss_pred ecCCeEEECCeEEEEEeCCCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 012940 147 VDNETISVDGKLIKVVSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 147 ~~~~~l~v~Gk~I~v~~~~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap 209 (453)
.++ .+.+++ ..+.++|+|+-||+.....+.+..++++| |.|++--|
T Consensus 70 -------------~~~--~~~~~l-l~~~~iD~V~i~tp~~~h~~~~~~al~~G-k~V~~EKP 115 (383)
T 3oqb_A 70 -------------RWT--TDLDAA-LADKNDTMFFDAATTQARPGLLTQAINAG-KHVYCEKP 115 (383)
T ss_dssp -------------CEE--SCHHHH-HHCSSCCEEEECSCSSSSHHHHHHHHTTT-CEEEECSC
T ss_pred -------------ccc--CCHHHH-hcCCCCCEEEECCCchHHHHHHHHHHHCC-CeEEEcCC
Confidence 011 112111 01126899999999999999999999999 56776444
No 114
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=94.46 E-value=0.12 Score=45.12 Aligned_cols=84 Identities=24% Similarity=0.303 Sum_probs=57.9
Q ss_pred eeeEEEEcC----ChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEE
Q 012940 86 KLKVAINGF----GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKV 161 (453)
Q Consensus 86 ~ikVaInGf----GrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v 161 (453)
+.+|||+|. |++|+.+++.|.+.. ++|..+|... +. +.|. ++
T Consensus 14 p~~IavIGaS~~~g~~G~~~~~~L~~~G---~~V~~vnp~~---------------------------~~--i~G~--~~ 59 (138)
T 1y81_A 14 FRKIALVGASKNPAKYGNIILKDLLSKG---FEVLPVNPNY---------------------------DE--IEGL--KC 59 (138)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTT---CEEEEECTTC---------------------------SE--ETTE--EC
T ss_pred CCeEEEEeecCCCCCHHHHHHHHHHHCC---CEEEEeCCCC---------------------------Ce--ECCe--ee
Confidence 358999998 999999999988754 5777776320 11 2332 22
Q ss_pred EeCCCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeC
Q 012940 162 VSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITA 208 (453)
Q Consensus 162 ~~~~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISa 208 (453)
+ .++++++- .+|+|+-+++.....+-+...+++|++.+++..
T Consensus 60 ~--~s~~el~~---~vDlvii~vp~~~v~~v~~~~~~~g~~~i~~~~ 101 (138)
T 1y81_A 60 Y--RSVRELPK---DVDVIVFVVPPKVGLQVAKEAVEAGFKKLWFQP 101 (138)
T ss_dssp B--SSGGGSCT---TCCEEEECSCHHHHHHHHHHHHHTTCCEEEECT
T ss_pred c--CCHHHhCC---CCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 2 34555552 689999999865555666667788998877754
No 115
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=94.41 E-value=0.034 Score=56.21 Aligned_cols=97 Identities=19% Similarity=0.106 Sum_probs=61.7
Q ss_pred eeeEEEEcCCh---hHHHHHHHHHhCCCCCceEEE-EcCCCChhhhhhhh-ccccceeecCceEEEecCCeEEECCeEEE
Q 012940 86 KLKVAINGFGR---IGRNFLRCWHGRKDSPLDVVV-VNDSGGVKNASHLL-KYDSLLGTFKADVKIVDNETISVDGKLIK 160 (453)
Q Consensus 86 ~ikVaInGfGr---IGR~vlr~l~~r~~~~ieiVa-Ind~~~~~~~a~Ll-kyDS~~G~f~~~v~~~~~~~l~v~Gk~I~ 160 (453)
++||||+|+|+ ||+..++++... +.++||+ |-|. +++....+. +|.. +.. .
T Consensus 12 ~~rvgiiG~G~~~~ig~~h~~~~~~~--~~~~lva~v~d~-~~~~a~~~a~~~g~-----~~~-~--------------- 67 (398)
T 3dty_A 12 PIRWAMVGGGSQSQIGYIHRCAALRD--NTFVLVAGAFDI-DPIRGSAFGEQLGV-----DSE-R--------------- 67 (398)
T ss_dssp CEEEEEEECCTTCSSHHHHHHHHHGG--GSEEEEEEECCS-SHHHHHHHHHHTTC-----CGG-G---------------
T ss_pred cceEEEEcCCccchhHHHHHHHHhhC--CCeEEEEEEeCC-CHHHHHHHHHHhCC-----Ccc-e---------------
Confidence 68999999999 999999887654 4589998 7776 443332222 1211 000 0
Q ss_pred EEeCCCCCCCCcc----ccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 012940 161 VVSNRDPLQLPWA----ELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 161 v~~~~dp~~l~W~----~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap 209 (453)
++ .+.+++--. +.++|+|+-||+.....+.+..++++| |.|++--|
T Consensus 68 ~~--~~~~~ll~~~~~~~~~vD~V~i~tp~~~H~~~~~~al~aG-khVl~EKP 117 (398)
T 3dty_A 68 CY--ADYLSMFEQEARRADGIQAVSIATPNGTHYSITKAALEAG-LHVVCEKP 117 (398)
T ss_dssp BC--SSHHHHHHHHTTCTTCCSEEEEESCGGGHHHHHHHHHHTT-CEEEECSC
T ss_pred ee--CCHHHHHhcccccCCCCCEEEECCCcHHHHHHHHHHHHCC-CeEEEeCC
Confidence 00 011111000 015899999999999999999999999 46777444
No 116
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=94.36 E-value=0.051 Score=51.38 Aligned_cols=94 Identities=17% Similarity=0.220 Sum_probs=58.2
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeCCC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~~d 166 (453)
+||+|+|.|.+|+.+++.+... ...+++|++-|. +++.. + -.++|.++. ...+
T Consensus 86 ~rV~IIGAG~~G~~La~~~~~~-~~g~~iVg~~D~-dp~k~---------------------g--~~i~gv~V~--~~~d 138 (215)
T 2vt3_A 86 TDVILIGVGNLGTAFLHYNFTK-NNNTKISMAFDI-NESKI---------------------G--TEVGGVPVY--NLDD 138 (215)
T ss_dssp -CEEEECCSHHHHHHHHCC-------CCEEEEEES-CTTTT---------------------T--CEETTEEEE--EGGG
T ss_pred CEEEEEccCHHHHHHHHHHhcc-cCCcEEEEEEeC-CHHHH---------------------H--hHhcCCeee--chhh
Confidence 5899999999999999942211 235899998775 22211 1 113443332 2223
Q ss_pred CCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCC
Q 012940 167 PLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (453)
Q Consensus 167 p~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISaps 210 (453)
.+++- .+ . |+|+-|++.....+-+...+++|.+.++.-+|.
T Consensus 139 l~eli-~~-~-D~ViIAvPs~~~~ei~~~l~~aGi~~Ilnf~P~ 179 (215)
T 2vt3_A 139 LEQHV-KD-E-SVAILTVPAVAAQSITDRLVALGIKGILNFTPA 179 (215)
T ss_dssp HHHHC-SS-C-CEEEECSCHHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred HHHHH-Hh-C-CEEEEecCchhHHHHHHHHHHcCCCEEEEcCce
Confidence 32221 12 3 999999998777788888899998766666664
No 117
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=94.31 E-value=0.38 Score=45.02 Aligned_cols=33 Identities=12% Similarity=0.097 Sum_probs=27.7
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 85 m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
|++||.|.|.|.||+.+++.|.++. .+|+++..
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~g---~~V~~~~r 36 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQG---WRIIGTSR 36 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGGT---CEEEEEES
T ss_pred CcCcEEEECCcHHHHHHHHHHHHCC---CEEEEEEc
Confidence 5679999999999999999998764 58888865
No 118
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=94.20 E-value=0.022 Score=58.71 Aligned_cols=99 Identities=9% Similarity=0.098 Sum_probs=65.4
Q ss_pred eeeEEEEcC----ChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEE
Q 012940 86 KLKVAINGF----GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKV 161 (453)
Q Consensus 86 ~ikVaInGf----GrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v 161 (453)
++||||+|+ |.+|+..++.|.... +.++||+|-|. +.+....+.+ .||. + . +.+
T Consensus 20 ~irvgiIG~g~~gG~~g~~~~~~l~~~~-~~~~lvav~d~-~~~~~~~~a~---~~g~-~-~---------------~~~ 77 (438)
T 3btv_A 20 PIRVGFVGLNAAKGWAIKTHYPAILQLS-SQFQITALYSP-KIETSIATIQ---RLKL-S-N---------------ATA 77 (438)
T ss_dssp CEEEEEESCCTTSSSTTTTHHHHHHHTT-TTEEEEEEECS-SHHHHHHHHH---HTTC-T-T---------------CEE
T ss_pred CCEEEEEcccCCCChHHHHHHHHHHhcC-CCeEEEEEEeC-CHHHHHHHHH---HcCC-C-c---------------cee
Confidence 489999999 999999999998651 45899999886 4433222211 0110 0 0 011
Q ss_pred EeCCCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCC-----CEEEEeCC
Q 012940 162 VSNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGA-----KKVIITAP 209 (453)
Q Consensus 162 ~~~~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGA-----kkVIISap 209 (453)
+ .+.+++- .+.++|+|+-||+.....+.+..++++|. |.|++--|
T Consensus 78 ~--~~~~~ll-~~~~vD~V~i~tp~~~H~~~~~~al~aG~~~~~~khVl~EKP 127 (438)
T 3btv_A 78 F--PTLESFA-SSSTIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWA 127 (438)
T ss_dssp E--SSHHHHH-HCSSCSEEEECSCHHHHHHHHHHHHHHGGGCTTCCEEEEESS
T ss_pred e--CCHHHHh-cCCCCCEEEEeCCcHHHHHHHHHHHHCCCCcccceeEEecCc
Confidence 1 1222221 11268999999999988899999999994 67777544
No 119
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=93.98 E-value=0.037 Score=52.40 Aligned_cols=97 Identities=21% Similarity=0.231 Sum_probs=61.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChh-hhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeCC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVK-NASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~-~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~~ 165 (453)
.||+|+|.|..|+.+++.+.. ...++++||+=|. +++ . .|+ + . ++|. .|..-.
T Consensus 85 ~~V~IvGaG~lG~aLa~~~~~-~~~g~~iVg~~D~-dp~~k----------iG~-----~-----~--i~Gv--pV~~~~ 138 (212)
T 3keo_A 85 TNVMLVGCGNIGRALLHYRFH-DRNKMQISMAFDL-DSNDL----------VGK-----T-----T--EDGI--PVYGIS 138 (212)
T ss_dssp EEEEEECCSHHHHHHTTCCCC-TTSSEEEEEEEEC-TTSTT----------TTC-----B-----C--TTCC--BEEEGG
T ss_pred CEEEEECcCHHHHHHHHhhhc-ccCCeEEEEEEeC-Cchhc----------cCc-----e-----e--ECCe--EEeCHH
Confidence 589999999999999886422 2246899988764 221 1 111 0 1 2332 332222
Q ss_pred CCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCC
Q 012940 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPA 210 (453)
Q Consensus 166 dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISaps 210 (453)
+.+++ -.+.++|+++-|++.....+-+....++|.|-++-=+|.
T Consensus 139 dL~~~-v~~~~Id~vIIAvPs~~aq~v~d~lv~~GIk~I~nFap~ 182 (212)
T 3keo_A 139 TINDH-LIDSDIETAILTVPSTEAQEVADILVKAGIKGILSFSPV 182 (212)
T ss_dssp GHHHH-C-CCSCCEEEECSCGGGHHHHHHHHHHHTCCEEEECSSS
T ss_pred HHHHH-HHHcCCCEEEEecCchhHHHHHHHHHHcCCCEEEEcCCc
Confidence 22211 134589999999998877778888899999865554553
No 120
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=93.79 E-value=0.019 Score=57.48 Aligned_cols=92 Identities=20% Similarity=0.200 Sum_probs=55.0
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeCC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~~ 165 (453)
+|||.|.|.|.||+.+++.|.+. .++.++.++ .+.+..+-+. . . .+.+ ...
T Consensus 16 ~mkilvlGaG~vG~~~~~~L~~~--~~v~~~~~~----~~~~~~~~~~-------~--------~-------~~~~-d~~ 66 (365)
T 3abi_A 16 HMKVLILGAGNIGRAIAWDLKDE--FDVYIGDVN----NENLEKVKEF-------A--------T-------PLKV-DAS 66 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTT--SEEEEEESC----HHHHHHHTTT-------S--------E-------EEEC-CTT
T ss_pred ccEEEEECCCHHHHHHHHHHhcC--CCeEEEEcC----HHHHHHHhcc-------C--------C-------cEEE-ecC
Confidence 57999999999999999988653 234433332 2222221110 0 0 1111 012
Q ss_pred CCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeC
Q 012940 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITA 208 (453)
Q Consensus 166 dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISa 208 (453)
|++.+.=--.++|+||.|+|.|...+-+...+++|+. +++.
T Consensus 67 d~~~l~~~~~~~DvVi~~~p~~~~~~v~~~~~~~g~~--yvD~ 107 (365)
T 3abi_A 67 NFDKLVEVMKEFELVIGALPGFLGFKSIKAAIKSKVD--MVDV 107 (365)
T ss_dssp CHHHHHHHHTTCSEEEECCCGGGHHHHHHHHHHHTCE--EEEC
T ss_pred CHHHHHHHHhCCCEEEEecCCcccchHHHHHHhcCcc--eEee
Confidence 2221111012689999999999988899999999984 4543
No 121
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=93.74 E-value=0.1 Score=47.31 Aligned_cols=31 Identities=23% Similarity=0.472 Sum_probs=26.2
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
|||.|.| .|.||+.+++.|.++. .+|+++..
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g---~~V~~~~R 32 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTD---YQIYAGAR 32 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSS---CEEEEEES
T ss_pred CeEEEECCCCHHHHHHHHHHHHCC---CEEEEEEC
Confidence 4899999 9999999999998763 58877764
No 122
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=93.68 E-value=0.15 Score=44.68 Aligned_cols=86 Identities=17% Similarity=0.069 Sum_probs=59.7
Q ss_pred eeEEEEcC----ChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEE
Q 012940 87 LKVAINGF----GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVV 162 (453)
Q Consensus 87 ikVaInGf----GrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~ 162 (453)
-+|||+|. |++|+.+++.|.+.. ++|..||-. . .++. +.|. +++
T Consensus 14 ~~vaVvGas~~~g~~G~~~~~~l~~~G---~~v~~vnp~----~---------------------~~~~--i~G~--~~~ 61 (140)
T 1iuk_A 14 KTIAVLGAHKDPSRPAHYVPRYLREQG---YRVLPVNPR----F---------------------QGEE--LFGE--EAV 61 (140)
T ss_dssp CEEEEETCCSSTTSHHHHHHHHHHHTT---CEEEEECGG----G---------------------TTSE--ETTE--ECB
T ss_pred CEEEEECCCCCCCChHHHHHHHHHHCC---CEEEEeCCC----c---------------------ccCc--CCCE--Eec
Confidence 47999997 899999999988764 577777631 0 0111 2342 232
Q ss_pred eCCCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 012940 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 163 ~~~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap 209 (453)
.++++++- .+|+|+-++......+.+....++|+|.++++.+
T Consensus 62 --~sl~el~~---~vDlavi~vp~~~~~~v~~~~~~~gi~~i~~~~g 103 (140)
T 1iuk_A 62 --ASLLDLKE---PVDILDVFRPPSALMDHLPEVLALRPGLVWLQSG 103 (140)
T ss_dssp --SSGGGCCS---CCSEEEECSCHHHHTTTHHHHHHHCCSCEEECTT
T ss_pred --CCHHHCCC---CCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 34555552 6899999998776667777788899998888654
No 123
>3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A*
Probab=93.63 E-value=0.19 Score=51.54 Aligned_cols=109 Identities=15% Similarity=0.142 Sum_probs=62.7
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhh-ccccceeecCceEEEecCCeE--EECCeEEEEE
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLL-KYDSLLGTFKADVKIVDNETI--SVDGKLIKVV 162 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~Ll-kyDS~~G~f~~~v~~~~~~~l--~v~Gk~I~v~ 162 (453)
.||+|.| +|.||++.|+++... +.++|+++.--.+.+.++... +|...+ +.+.++... .+. . .+.
T Consensus 4 k~i~ILGsTGSIG~~tldVi~~~--~~~~vvaL~a~~n~~~l~~q~~~f~p~~------v~v~~~~~~~~~l~--~-~~~ 72 (376)
T 3a06_A 4 RTLVILGATGSIGTQTLDVLKKV--KGIRLIGISFHSNLELAFKIVKEFNVKN------VAITGDVEFEDSSI--N-VWK 72 (376)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHS--CSEEEEEEEESSCHHHHHHHHHHHTCCE------EEECSSCCCCCSSS--E-EEE
T ss_pred ceEEEECCCCHHHHHHHHHHHhC--CCeEEEEEEccCCHHHHHHHHHHcCCCE------EEEccHHHHHHHHH--H-Hcc
Confidence 5899999 899999999999875 469999994333555554443 232211 110000000 000 0 010
Q ss_pred eCCCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeC
Q 012940 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITA 208 (453)
Q Consensus 163 ~~~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISa 208 (453)
......++- ....+|+|+.++-.+...+-.-.++++| |+|.+.+
T Consensus 73 G~~~l~el~-~~~~~D~Vv~AivG~aGL~ptlaAi~aG-K~vaLAN 116 (376)
T 3a06_A 73 GSHSIEEML-EALKPDITMVAVSGFSGLRAVLASLEHS-KRVCLAN 116 (376)
T ss_dssp STTHHHHHH-HHHCCSEEEECCCSTTHHHHHHHHHHHC-SEEEECC
T ss_pred CHHHHHHHh-cCCCCCEEEEEeeCHHHHHHHHHHHHCC-CEEEEeC
Confidence 000001110 1125899999998888888888899999 5666633
No 124
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=93.50 E-value=0.22 Score=43.63 Aligned_cols=83 Identities=25% Similarity=0.192 Sum_probs=58.3
Q ss_pred eeEEEEcC----ChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEE
Q 012940 87 LKVAINGF----GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVV 162 (453)
Q Consensus 87 ikVaInGf----GrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~ 162 (453)
.+|||+|. |++|+.+++.|.+.. ++|..||-. .+. +.|. .++
T Consensus 23 ~~iaVVGas~~~g~~G~~~~~~l~~~G---~~v~~Vnp~---------------------------~~~--i~G~--~~y 68 (144)
T 2d59_A 23 KKIALVGASPKPERDANIVMKYLLEHG---YDVYPVNPK---------------------------YEE--VLGR--KCY 68 (144)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTT---CEEEEECTT---------------------------CSE--ETTE--ECB
T ss_pred CEEEEEccCCCCCchHHHHHHHHHHCC---CEEEEECCC---------------------------CCe--ECCe--ecc
Confidence 48999997 799999999988754 577777632 000 2332 232
Q ss_pred eCCCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeC
Q 012940 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITA 208 (453)
Q Consensus 163 ~~~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISa 208 (453)
.++++++- .+|+|+-++......+.+...+++|+|.++++.
T Consensus 69 --~sl~~l~~---~vDlvvi~vp~~~~~~vv~~~~~~gi~~i~~~~ 109 (144)
T 2d59_A 69 --PSVLDIPD---KIEVVDLFVKPKLTMEYVEQAIKKGAKVVWFQY 109 (144)
T ss_dssp --SSGGGCSS---CCSEEEECSCHHHHHHHHHHHHHHTCSEEEECT
T ss_pred --CCHHHcCC---CCCEEEEEeCHHHHHHHHHHHHHcCCCEEEECC
Confidence 34555652 689999999886666777778889999877753
No 125
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=93.38 E-value=0.24 Score=43.43 Aligned_cols=85 Identities=18% Similarity=0.132 Sum_probs=58.7
Q ss_pred eeEEEEcC----ChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEE
Q 012940 87 LKVAINGF----GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVV 162 (453)
Q Consensus 87 ikVaInGf----GrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~ 162 (453)
.+|||+|. |++|+.+++.|.+.. ++|..+|-.. .++. +.|. +++
T Consensus 14 ~~IavIGas~~~g~~G~~~~~~L~~~G---~~v~~vnp~~-------------------------~g~~--i~G~--~~~ 61 (145)
T 2duw_A 14 RTIALVGASDKPDRPSYRVMKYLLDQG---YHVIPVSPKV-------------------------AGKT--LLGQ--QGY 61 (145)
T ss_dssp CCEEEESCCSCTTSHHHHHHHHHHHHT---CCEEEECSSS-------------------------TTSE--ETTE--ECC
T ss_pred CEEEEECcCCCCCChHHHHHHHHHHCC---CEEEEeCCcc-------------------------cccc--cCCe--ecc
Confidence 47999997 899999999987654 4677776320 0111 2342 232
Q ss_pred eCCCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeC
Q 012940 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITA 208 (453)
Q Consensus 163 ~~~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISa 208 (453)
.++++++- .+|+|+-|+......+-+...+++|+|.+++..
T Consensus 62 --~sl~el~~---~~Dlvii~vp~~~v~~v~~~~~~~g~~~i~i~~ 102 (145)
T 2duw_A 62 --ATLADVPE---KVDMVDVFRNSEAAWGVAQEAIAIGAKTLWLQL 102 (145)
T ss_dssp --SSTTTCSS---CCSEEECCSCSTHHHHHHHHHHHHTCCEEECCT
T ss_pred --CCHHHcCC---CCCEEEEEeCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 45666662 689999999876666666667789999888753
No 126
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=92.80 E-value=0.28 Score=51.67 Aligned_cols=103 Identities=17% Similarity=0.137 Sum_probs=67.5
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCC---------CChhhhhhhhccccce-eecCceEEEecCCeEEEC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS---------GGVKNASHLLKYDSLL-GTFKADVKIVDNETISVD 155 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~---------~~~~~~a~LlkyDS~~-G~f~~~v~~~~~~~l~v~ 155 (453)
..||+|-|||.||..+++.|.+.. -.||+|.|. .+.+.+..|+++-..+ |+...- .+. +.
T Consensus 252 g~~vaVqG~GnVG~~~a~~L~~~G---akvVavsD~~G~i~dp~Gid~edl~~l~~~k~~~~g~v~~~----~~~---~~ 321 (470)
T 2bma_A 252 KQTAVVSGSGNVALYCVQKLLHLN---VKVLTLSDSNGYVYEPNGFTHENLEFLIDLKEEKKGRIKEY----LNH---SS 321 (470)
T ss_dssp GCEEEEECSSHHHHHHHHHHHHTT---CEECEEEETTEEEECSSCCCHHHHHHHHHHHTTTTCCGGGG----GGT---CS
T ss_pred CCEEEEECCcHHHHHHHHHHHHCC---CEEEEEEeCCceEECCCCCCHHHHHHHHHHHHhcCCcHHHH----Hhh---cC
Confidence 358999999999999999998764 589999885 3455666666432211 222211 000 00
Q ss_pred CeEEEEEeCCCCCCCCccccCccEEEcCC-CCCCChhhHHHHHHcCCCEEEE
Q 012940 156 GKLIKVVSNRDPLQLPWAELGIDIVIEGT-GVFVDGPGAGKHIQAGAKKVII 206 (453)
Q Consensus 156 Gk~I~v~~~~dp~~l~W~~~gvDiVie~T-G~f~s~e~a~~hl~aGAkkVII 206 (453)
|- +.. +++++ |. ..+||.+-|+ +..++.+.+...++.+|| +|+
T Consensus 322 ~a--~~v---~~~~~-~~-~~~DI~iPcA~~~~I~~~na~~l~~~~ak-~V~ 365 (470)
T 2bma_A 322 TA--KYF---PNEKP-WG-VPCTLAFPCATQNDVDLDQAKLLQKNGCI-LVG 365 (470)
T ss_dssp SC--EEC---SSCCT-TS-SCCSEEEECSSTTCBCSHHHHHHHHTTCC-EEE
T ss_pred Cc--EEe---cCcCe-ee-cCccEEEeccccCcCCHHHHHHHHhcCcE-EEE
Confidence 10 111 12333 74 6899999987 778899999998888995 455
No 127
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=92.80 E-value=0.22 Score=47.48 Aligned_cols=33 Identities=18% Similarity=0.371 Sum_probs=27.3
Q ss_pred ceeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 85 m~ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
|++||.|.| .|.||+.+++.|.++. .+|+++..
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 34 (311)
T 3m2p_A 1 MSLKIAVTGGTGFLGQYVVESIKNDG---NTPIILTR 34 (311)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCC---CEEEEEeC
Confidence 567999999 9999999999998864 58877764
No 128
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=92.72 E-value=0.15 Score=49.90 Aligned_cols=87 Identities=20% Similarity=0.083 Sum_probs=57.1
Q ss_pred eeeEEEEcC-ChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeC
Q 012940 86 KLKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (453)
Q Consensus 86 ~ikVaInGf-GrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~ 164 (453)
++||+|.|+ |++|+..++.+.+.. +++|+.-++.. .++. +.| ++++
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l~~~g---~~~V~~V~p~~------------------------~g~~--~~G--~~vy-- 53 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQAIAYG---TKMVGGVTPGK------------------------GGTT--HLG--LPVF-- 53 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHT---CEEEEEECTTC------------------------TTCE--ETT--EEEE--
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC---CeEEEEeCCCc------------------------ccce--eCC--eecc--
Confidence 469999996 999999999887643 57664433310 0000 223 2333
Q ss_pred CCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEE
Q 012940 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVII 206 (453)
Q Consensus 165 ~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVII 206 (453)
.+.++++- +.++|+|+.++......+.+...+++|.+.+|+
T Consensus 54 ~sl~el~~-~~~~D~viI~tP~~~~~~~~~ea~~~Gi~~iVi 94 (288)
T 2nu8_A 54 NTVREAVA-ATGATASVIYVPAPFCKDSILEAIDAGIKLIIT 94 (288)
T ss_dssp SSHHHHHH-HHCCCEEEECCCGGGHHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHhh-cCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 22333321 126899999999998889999999999986444
No 129
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=92.01 E-value=0.12 Score=48.61 Aligned_cols=95 Identities=13% Similarity=0.126 Sum_probs=53.8
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeCC
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~~ 165 (453)
|||.|.| +|.||+.+++.|.++ +..+|+++... ++....+.. ..++ +....-.
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~--~g~~V~~~~R~--~~~~~~~~~---------~~v~-------------~~~~D~~ 54 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIAN--HIDHFHIGVRN--VEKVPDDWR---------GKVS-------------VRQLDYF 54 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHT--TCTTEEEEESS--GGGSCGGGB---------TTBE-------------EEECCTT
T ss_pred CEEEEEcCCchHHHHHHHHHhhC--CCCcEEEEECC--HHHHHHhhh---------CCCE-------------EEEcCCC
Confidence 4799999 999999999998865 13577777643 221111110 0011 0010112
Q ss_pred CCCCCCccccCccEEEcCCCCCCC--------hhhHHHHHHcCCCEEEEe
Q 012940 166 DPLQLPWAELGIDIVIEGTGVFVD--------GPGAGKHIQAGAKKVIIT 207 (453)
Q Consensus 166 dp~~l~W~~~gvDiVie~TG~f~s--------~e~a~~hl~aGAkkVIIS 207 (453)
|++.+.-.-.++|+||.++|.... +..+....++|++++|..
T Consensus 55 d~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~ 104 (289)
T 3e48_A 55 NQESMVEAFKGMDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFI 104 (289)
T ss_dssp CHHHHHHHTTTCSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CHHHHHHHHhCCCEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEEE
Confidence 222222111379999999986433 233445667899887764
No 130
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=91.89 E-value=0.24 Score=41.20 Aligned_cols=30 Identities=27% Similarity=0.485 Sum_probs=24.6
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 88 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 88 kVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
+|.|.|.|.+|+.+++.|.+.. .+++.+..
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~g---~~v~~~d~ 37 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRMG---HEVLAVDI 37 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHTT---CCCEEEES
T ss_pred cEEEECCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 6999999999999999998753 46666653
No 131
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=91.83 E-value=0.18 Score=48.25 Aligned_cols=101 Identities=18% Similarity=0.103 Sum_probs=55.0
Q ss_pred ceeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcCCC-C---hhhhhhhhccccceeecCceEEEecCCeEEECCeEE
Q 012940 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSG-G---VKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLI 159 (453)
Q Consensus 85 m~ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd~~-~---~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I 159 (453)
|+++|.|.| +|.||+.+++.|.++. .+|+++.... + ++....+-.... ..++. +
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~R~~~~~~~~~~~~~l~~~~~------~~v~~------------v 61 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSFS---HPTFIYARPLTPDSTPSSVQLREEFRS------MGVTI------------I 61 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHTT---CCEEEEECCCCTTCCHHHHHHHHHHHH------TTCEE------------E
T ss_pred cccEEEEEcCCchhHHHHHHHHHhCC---CcEEEEECCcccccChHHHHHHHHhhc------CCcEE------------E
Confidence 346899999 8999999999998864 4777765432 1 222111110000 00110 0
Q ss_pred EEEeCCCCCCCCccccCccEEEcCCCCC---CChhhHHHHHHcC-CCEEEEe
Q 012940 160 KVVSNRDPLQLPWAELGIDIVIEGTGVF---VDGPGAGKHIQAG-AKKVIIT 207 (453)
Q Consensus 160 ~v~~~~dp~~l~W~~~gvDiVie~TG~f---~s~e~a~~hl~aG-AkkVIIS 207 (453)
.. .-.|++.+.-.-.++|+||.++|.. .....+....++| ++++|.|
T Consensus 62 ~~-D~~d~~~l~~a~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S 112 (321)
T 3c1o_A 62 EG-EMEEHEKMVSVLKQVDIVISALPFPMISSQIHIINAIKAAGNIKRFLPS 112 (321)
T ss_dssp EC-CTTCHHHHHHHHTTCSEEEECCCGGGSGGGHHHHHHHHHHCCCCEEECS
T ss_pred Ee-cCCCHHHHHHHHcCCCEEEECCCccchhhHHHHHHHHHHhCCccEEecc
Confidence 00 0122222211112689999999853 3345556666788 9887743
No 132
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=91.73 E-value=0.45 Score=40.99 Aligned_cols=82 Identities=16% Similarity=0.072 Sum_probs=61.3
Q ss_pred eEEEEcC----ChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEe
Q 012940 88 KVAINGF----GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (453)
Q Consensus 88 kVaInGf----GrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~ 163 (453)
+|||+|. |++|..+++.|.+.. ++|..||-. ++. +.|.+ ++
T Consensus 6 siAVVGaS~~~~~~g~~v~~~L~~~g---~~V~pVnP~-----------~~~------------------i~G~~--~y- 50 (122)
T 3ff4_A 6 KTLILGATPETNRYAYLAAERLKSHG---HEFIPVGRK-----------KGE------------------VLGKT--II- 50 (122)
T ss_dssp CEEEETCCSCTTSHHHHHHHHHHHHT---CCEEEESSS-----------CSE------------------ETTEE--CB-
T ss_pred EEEEEccCCCCCCHHHHHHHHHHHCC---CeEEEECCC-----------CCc------------------CCCee--cc-
Confidence 6999994 899999999998764 588889842 111 33422 21
Q ss_pred CCCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCC
Q 012940 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAP 209 (453)
Q Consensus 164 ~~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISap 209 (453)
.+.+++| . +|+|+-+++.....+..+...+.|+|.|+++..
T Consensus 51 -~sl~dlp---~-vDlavi~~p~~~v~~~v~e~~~~g~k~v~~~~G 91 (122)
T 3ff4_A 51 -NERPVIE---G-VDTVTLYINPQNQLSEYNYILSLKPKRVIFNPG 91 (122)
T ss_dssp -CSCCCCT---T-CCEEEECSCHHHHGGGHHHHHHHCCSEEEECTT
T ss_pred -CChHHCC---C-CCEEEEEeCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 4567777 3 899999999888888888888999998877653
No 133
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=91.28 E-value=0.17 Score=45.80 Aligned_cols=31 Identities=26% Similarity=0.341 Sum_probs=26.5
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
+||.|.| .|.||+.+++.|.++. .+|+++..
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g---~~V~~~~r 36 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRG---FEVTAVVR 36 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTT---CEEEEECS
T ss_pred CEEEEEcCCchHHHHHHHHHHHCC---CEEEEEEc
Confidence 5899999 8999999999998764 58877764
No 134
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=91.23 E-value=0.21 Score=47.41 Aligned_cols=32 Identities=22% Similarity=0.222 Sum_probs=26.5
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcCC
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd~ 121 (453)
+||.|.| +|.||+.+++.|.++. .+|+++...
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~R~ 37 (313)
T 1qyd_A 5 SRVLIVGGTGYIGKRIVNASISLG---HPTYVLFRP 37 (313)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTT---CCEEEECCS
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCC---CcEEEEECC
Confidence 5899999 8999999999998764 577777543
No 135
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=91.20 E-value=0.34 Score=49.39 Aligned_cols=156 Identities=12% Similarity=0.112 Sum_probs=77.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc--eEEEEcCCCChhhhhhhhc-cccceeecCceEEEecCCeEEECCeEEEEEe
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPL--DVVVVNDSGGVKNASHLLK-YDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~i--eiVaInd~~~~~~~a~Llk-yDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~ 163 (453)
+||+|.|.|.||+.+++.|.++. ++ +|+.. +. +.+.+..+.+ +.. .....+. .+.+ .
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g--~~~~~V~v~-~r-~~~~~~~la~~l~~---~~~~~~~------------~~~~-D 61 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNR--EVFSHITLA-SR-TLSKCQEIAQSIKA---KGYGEID------------ITTV-D 61 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCT--TTCCEEEEE-ES-CHHHHHHHHHHHHH---TTCCCCE------------EEEC-C
T ss_pred CEEEEECCCHHHHHHHHHHHhCC--CCceEEEEE-EC-CHHHHHHHHHHhhh---hcCCceE------------EEEe-c
Confidence 58999999999999999998753 34 44443 33 2322222221 100 0000010 0010 0
Q ss_pred CCCCCCCC--ccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeCCCCCCCCCeEEeccCcc---ccCccCCeEEecC
Q 012940 164 NRDPLQLP--WAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEK---DYDHEVANIVSNA 238 (453)
Q Consensus 164 ~~dp~~l~--W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISaps~d~dvPtvV~gVN~~---~~~~~~~~IVSna 238 (453)
..+++++. ..+.++|+||.|+|.+...+.+...+++|+. ++-++....++...+.+..-.+ ........++.+.
T Consensus 62 ~~d~~~l~~~l~~~~~DvVin~ag~~~~~~v~~a~l~~g~~-vvD~a~~~~~~~~~~~~~~~~~l~~~a~~aG~~~i~g~ 140 (405)
T 4ina_A 62 ADSIEELVALINEVKPQIVLNIALPYQDLTIMEACLRTGVP-YLDTANYEHPDLAKFEYKEQWAFHDRYKEKGVMALLGS 140 (405)
T ss_dssp TTCHHHHHHHHHHHCCSEEEECSCGGGHHHHHHHHHHHTCC-EEESSCCBCTTCSCBCSHHHHTTHHHHHHHTCEEEECC
T ss_pred CCCHHHHHHHHHhhCCCEEEECCCcccChHHHHHHHHhCCC-EEEecCCCCcccchhhhHHHHHHHHHHHHhCCEEEEcC
Confidence 01111110 1112489999999999888888889999985 3323222111111111111001 1111114577777
Q ss_pred CcchhhhhhHHHHHhhh-cC-eeEEEE
Q 012940 239 SCTTNCLAPFVKVMDEE-LG-IVKGAM 263 (453)
Q Consensus 239 SCTTn~Lapvlk~L~d~-fG-I~~~~m 263 (453)
+|--.....++..+.++ |+ |+++.+
T Consensus 141 G~~PG~~~l~a~~~~~~~~~~i~~i~i 167 (405)
T 4ina_A 141 GFDPGVTNVFCAYAQKHYFDEIHEIDI 167 (405)
T ss_dssp BTTTBHHHHHHHHHHHHTCSEEEEEEE
T ss_pred CCCccHHHHHHHHHHHhccCcccEEEE
Confidence 77655555555555553 55 666655
No 136
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=91.15 E-value=0.25 Score=43.49 Aligned_cols=31 Identities=29% Similarity=0.255 Sum_probs=26.0
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
+||.|.| +|.||+.+++.|.++. .+|+++..
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g---~~V~~~~r 35 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAG---YEVTVLVR 35 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCC---CeEEEEEe
Confidence 5899999 8999999999998763 57777754
No 137
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=91.12 E-value=0.23 Score=42.47 Aligned_cols=34 Identities=18% Similarity=0.278 Sum_probs=28.5
Q ss_pred cceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 84 VAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 84 ~m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
.|+-+|.|.|+|++|+.+++.|.++. .++++|..
T Consensus 5 ~~~~~viIiG~G~~G~~la~~L~~~g---~~v~vid~ 38 (140)
T 3fwz_A 5 DICNHALLVGYGRVGSLLGEKLLASD---IPLVVIET 38 (140)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHTT---CCEEEEES
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCC---CCEEEEEC
Confidence 45568999999999999999998763 68888865
No 138
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=91.12 E-value=0.25 Score=44.17 Aligned_cols=31 Identities=29% Similarity=0.439 Sum_probs=26.5
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
|||.|.| +|.||+.+++.|.++. .+|+++..
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g---~~V~~~~R 32 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRG---HEVTAIVR 32 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CeEEEEcCCchhHHHHHHHHHhCC---CEEEEEEc
Confidence 4899999 8999999999998864 58888765
No 139
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=91.05 E-value=0.21 Score=47.82 Aligned_cols=33 Identities=24% Similarity=0.226 Sum_probs=26.7
Q ss_pred ceeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 85 m~ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
|+.||.|.| +|.||+.+++.|.++. .+|+++..
T Consensus 10 m~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~l~R 43 (318)
T 2r6j_A 10 MKSKILIFGGTGYIGNHMVKGSLKLG---HPTYVFTR 43 (318)
T ss_dssp CCCCEEEETTTSTTHHHHHHHHHHTT---CCEEEEEC
T ss_pred CCCeEEEECCCchHHHHHHHHHHHCC---CcEEEEEC
Confidence 445899999 8999999999998864 47777654
No 140
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=89.63 E-value=2.2 Score=38.79 Aligned_cols=32 Identities=19% Similarity=0.350 Sum_probs=26.9
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
.+||.|.| .|.||+.+++.|.++. .+|+++..
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G---~~V~~~~R 53 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKG---HEPVAMVR 53 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CCeEEEECCCChHHHHHHHHHHhCC---CeEEEEEC
Confidence 46899999 8999999999998864 58877764
No 141
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=89.09 E-value=0.41 Score=46.45 Aligned_cols=99 Identities=18% Similarity=0.146 Sum_probs=55.6
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcCCC--ChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEE
Q 012940 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSG--GVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVV 162 (453)
Q Consensus 86 ~ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd~~--~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~ 162 (453)
++||.|.| +|.||+.+++.|.++. .+|+++.... .++....+-.... .+ +.+.
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g---~~V~~l~R~~~~~~~~~~~~~~l~~------------~~---------v~~~ 65 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAH---RPTYILARPGPRSPSKAKIFKALED------------KG---------AIIV 65 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTT---CCEEEEECSSCCCHHHHHHHHHHHH------------TT---------CEEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCC---CCEEEEECCCCCChhHHHHHHHHHh------------CC---------cEEE
Confidence 36899999 8999999999998764 4777776532 2222221111000 00 0111
Q ss_pred e--CCCCCCCCc--cccCccEEEcCCCCC---CChhhHHHHHHcC-CCEEEEeC
Q 012940 163 S--NRDPLQLPW--AELGIDIVIEGTGVF---VDGPGAGKHIQAG-AKKVIITA 208 (453)
Q Consensus 163 ~--~~dp~~l~W--~~~gvDiVie~TG~f---~s~e~a~~hl~aG-AkkVIISa 208 (453)
. -.|++.+.. .+.++|+||.++|.. .+...+....++| ++++|.|.
T Consensus 66 ~~Dl~d~~~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~v~S~ 119 (346)
T 3i6i_A 66 YGLINEQEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLPSE 119 (346)
T ss_dssp ECCTTCHHHHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEEECSC
T ss_pred EeecCCHHHHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEEeecc
Confidence 1 112222221 122799999999863 2234445566788 99887653
No 142
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=89.04 E-value=0.36 Score=45.61 Aligned_cols=100 Identities=20% Similarity=0.230 Sum_probs=54.8
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcCCCC----hhhhhhhhccccceeecCceEEEecCCeEEECCeEEEE
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGG----VKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKV 161 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd~~~----~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v 161 (453)
+||.|.| +|.||+.+++.|.++. .+|+++..... ++....+-.... ..++. +.+
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g---~~V~~l~R~~~~~~~~~~~~~~~~l~~------~~v~~-------v~~----- 63 (308)
T 1qyc_A 5 SRILLIGATGYIGRHVAKASLDLG---HPTFLLVRESTASSNSEKAQLLESFKA------SGANI-------VHG----- 63 (308)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTT---CCEEEECCCCCTTTTHHHHHHHHHHHT------TTCEE-------ECC-----
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCC---CCEEEEECCcccccCHHHHHHHHHHHh------CCCEE-------EEe-----
Confidence 5899999 8999999999998764 47777654311 222211111000 00110 000
Q ss_pred EeCCCCCCCCccccCccEEEcCCCCC---CChhhHHHHHHcC-CCEEEEeC
Q 012940 162 VSNRDPLQLPWAELGIDIVIEGTGVF---VDGPGAGKHIQAG-AKKVIITA 208 (453)
Q Consensus 162 ~~~~dp~~l~W~~~gvDiVie~TG~f---~s~e~a~~hl~aG-AkkVIISa 208 (453)
.-.+++.+.-.-.++|+||.++|.. .....+....++| ++++|.|.
T Consensus 64 -D~~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v~S~ 113 (308)
T 1qyc_A 64 -SIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSE 113 (308)
T ss_dssp -CTTCHHHHHHHHHTCSEEEECCCGGGSGGGHHHHHHHHHHCCCSEEECSC
T ss_pred -ccCCHHHHHHHHcCCCEEEECCcchhhhhHHHHHHHHHhcCCCceEeecc
Confidence 0112222211112689999999853 2344555666788 99887543
No 143
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=88.86 E-value=0.67 Score=48.52 Aligned_cols=102 Identities=16% Similarity=0.168 Sum_probs=66.2
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCC---------C-Chhhhhhhhccccce-eecCceEEEecCCeEEEC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS---------G-GVKNASHLLKYDSLL-GTFKADVKIVDNETISVD 155 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~---------~-~~~~~a~LlkyDS~~-G~f~~~v~~~~~~~l~v~ 155 (453)
.+|+|-|||-+|..+++.|.+.. ..||+|.|. . +++.+..|++|-..+ |.+..- .+ . ++
T Consensus 231 ~~v~VqG~GnVG~~~a~~L~~~G---akvVavsD~~G~i~dp~Gi~d~edi~~l~~~k~~~~g~v~~y----~~-~--~~ 300 (449)
T 1bgv_A 231 KTVALAGFGNVAWGAAKKLAELG---AKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQDY----AD-K--FG 300 (449)
T ss_dssp CEEEECCSSHHHHHHHHHHHHHT---CEEEEEEETTEEEECTTCSCSHHHHHHHHHHHHHCCCCTHHH----HH-H--HT
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEEEeCCceEECCCcCCCHHHHHHHHHHHhccCCChhhc----cc-c--cC
Confidence 58999999999999999998763 699999884 1 344555565433222 222110 00 0 01
Q ss_pred CeEEEEEeCCCCCCCCccccCccEEEcCC-CCCCChhhHHHHHHcCCCEEEEe
Q 012940 156 GKLIKVVSNRDPLQLPWAELGIDIVIEGT-GVFVDGPGAGKHIQAGAKKVIIT 207 (453)
Q Consensus 156 Gk~I~v~~~~dp~~l~W~~~gvDiVie~T-G~f~s~e~a~~hl~aGAkkVIIS 207 (453)
.+.+ . ++++ |. ..+||.+-|+ +..++.+.+......||| +|+-
T Consensus 301 a~~i---~---~~e~-~~-~~~Dil~P~A~~~~I~~~na~~l~a~g~k-iV~E 344 (449)
T 1bgv_A 301 VQFF---P---GEKP-WG-QKVDIIMPCATQNDVDLEQAKKIVANNVK-YYIE 344 (449)
T ss_dssp CEEE---E---TCCG-GG-SCCSEEECCSCTTCBCHHHHHHHHHTTCC-EEEC
T ss_pred CEEe---C---chhh-hc-CCcceeeccccccccchhhHHHHHhcCCe-EEEe
Confidence 2222 1 2233 74 6899999987 778999999988888995 5553
No 144
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=88.37 E-value=0.48 Score=46.37 Aligned_cols=85 Identities=18% Similarity=0.137 Sum_probs=56.2
Q ss_pred eeEEEEcC-ChhHHHHHHHHHhCCCCCceEE-EEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeC
Q 012940 87 LKVAINGF-GRIGRNFLRCWHGRKDSPLDVV-VVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (453)
Q Consensus 87 ikVaInGf-GrIGR~vlr~l~~r~~~~ieiV-aInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~ 164 (453)
+||+|.|. |+.|+.+++.+.+.. ++++ .||... .++. +.| ++++.
T Consensus 8 ~~VaVvGasG~~G~~~~~~l~~~g---~~~v~~VnP~~-------------------------~g~~--i~G--~~vy~- 54 (288)
T 1oi7_A 8 TRVLVQGITGREGQFHTKQMLTYG---TKIVAGVTPGK-------------------------GGME--VLG--VPVYD- 54 (288)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHT---CEEEEEECTTC-------------------------TTCE--ETT--EEEES-
T ss_pred CEEEEECCCCCHHHHHHHHHHHcC---CeEEEEECCCC-------------------------CCce--ECC--EEeeC-
Confidence 69999995 999999999887653 5665 555210 0010 233 23332
Q ss_pred CCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEE
Q 012940 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVII 206 (453)
Q Consensus 165 ~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVII 206 (453)
+.++++- +.++|+++.++......+.+...+++|++.+|+
T Consensus 55 -sl~el~~-~~~~Dv~Ii~vp~~~~~~~~~ea~~~Gi~~vVi 94 (288)
T 1oi7_A 55 -TVKEAVA-HHEVDASIIFVPAPAAADAALEAAHAGIPLIVL 94 (288)
T ss_dssp -SHHHHHH-HSCCSEEEECCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred -CHHHHhh-cCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 2333321 126899999999888888888899999986555
No 145
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=88.17 E-value=0.69 Score=47.93 Aligned_cols=95 Identities=26% Similarity=0.369 Sum_probs=57.5
Q ss_pred eeeEEEEcCChhHHHHHHHHHh-CCCCCceEEEEcCCC---------ChhhhhhhhccccceeecCceEEEecCCeEEEC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHG-RKDSPLDVVVVNDSG---------GVKNASHLLKYDSLLGTFKADVKIVDNETISVD 155 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~-r~~~~ieiVaInd~~---------~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~ 155 (453)
..||+|-|||-||+.+++.|.+ . ...||+|.|.. +++.+ ++|-..+|++.. + .+
T Consensus 209 g~~vaVqG~GnVG~~~a~~L~e~~---GakvVavsD~~G~i~dp~Gld~~~l---~~~~~~~g~l~~---y-~~------ 272 (415)
T 2tmg_A 209 KATVAVQGFGNVGQFAALLISQEL---GSKVVAVSDSRGGIYNPEGFDVEEL---IRYKKEHGTVVT---Y-PK------ 272 (415)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT---CCEEEEEECSSCEEECTTCCCHHHH---HHHHHHSSCSTT---C-SS------
T ss_pred CCEEEEECCcHHHHHHHHHHHHhc---CCEEEEEEeCCCeEECCCCCCHHHH---HHHHHhhCCccc---C-CC------
Confidence 3689999999999999999987 5 37999999862 33322 222112232211 0 00
Q ss_pred CeEEEEEeCCCCCCCCccccCccEEEcCC-CCCCChhhHHHHHHcCCCEEEEeC
Q 012940 156 GKLIKVVSNRDPLQLPWAELGIDIVIEGT-GVFVDGPGAGKHIQAGAKKVIITA 208 (453)
Q Consensus 156 Gk~I~v~~~~dp~~l~W~~~gvDiVie~T-G~f~s~e~a~~hl~aGAkkVIISa 208 (453)
.+.+ +++++ |. ..+||++.|+ +..++.+.+... +|| +|+-+
T Consensus 273 a~~~------~~~ei-l~-~~~DIliP~A~~n~i~~~~a~~l---~ak-~V~Eg 314 (415)
T 2tmg_A 273 GERI------TNEEL-LE-LDVDILVPAALEGAIHAGNAERI---KAK-AVVEG 314 (415)
T ss_dssp SEEE------CHHHH-TT-CSCSEEEECSSTTSBCHHHHTTC---CCS-EEECC
T ss_pred ceEc------Cchhh-hc-CCCcEEEecCCcCccCcccHHHc---CCe-EEEeC
Confidence 1111 11222 54 5799999997 667777776543 664 55543
No 146
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=88.07 E-value=0.41 Score=48.23 Aligned_cols=32 Identities=31% Similarity=0.402 Sum_probs=26.5
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
..+|||+|+|+||+.+++.|... .++|++.+.
T Consensus 173 gktvGIIGlG~IG~~vA~~l~~~---G~~V~~~dr 204 (345)
T 4g2n_A 173 GRRLGIFGMGRIGRAIATRARGF---GLAIHYHNR 204 (345)
T ss_dssp TCEEEEESCSHHHHHHHHHHHTT---TCEEEEECS
T ss_pred CCEEEEEEeChhHHHHHHHHHHC---CCEEEEECC
Confidence 35899999999999999998754 378887764
No 147
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=88.02 E-value=0.56 Score=46.86 Aligned_cols=31 Identities=23% Similarity=0.350 Sum_probs=25.7
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
..+|||+|||+||+.+.+.+.... ++|++.+
T Consensus 141 g~tvGIiG~G~IG~~va~~~~~fg---~~v~~~d 171 (334)
T 3kb6_A 141 RLTLGVIGTGRIGSRVAMYGLAFG---MKVLCYD 171 (334)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CcEEEEECcchHHHHHHHhhcccC---ceeeecC
Confidence 358999999999999999987653 7887765
No 148
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=87.97 E-value=0.41 Score=47.83 Aligned_cols=32 Identities=22% Similarity=0.304 Sum_probs=26.8
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
..+|||+|+|+||+.+++.|... .++|++.+.
T Consensus 141 g~tvgIiG~G~IG~~vA~~l~~~---G~~V~~~d~ 172 (334)
T 2pi1_A 141 RLTLGVIGTGRIGSRVAMYGLAF---GMKVLCYDV 172 (334)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT---TCEEEEECS
T ss_pred CceEEEECcCHHHHHHHHHHHHC---cCEEEEECC
Confidence 45899999999999999999865 378887764
No 149
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=87.69 E-value=0.42 Score=45.14 Aligned_cols=31 Identities=23% Similarity=0.195 Sum_probs=25.2
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
+||.|.| +|.||+.+++.|.++. .+|+++..
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~R 34 (307)
T 2gas_A 3 NKILILGPTGAIGRHIVWASIKAG---NPTYALVR 34 (307)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHHT---CCEEEEEC
T ss_pred cEEEEECCCchHHHHHHHHHHhCC---CcEEEEEC
Confidence 4899999 8999999999998763 46666654
No 150
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=87.68 E-value=1.6 Score=42.44 Aligned_cols=32 Identities=31% Similarity=0.287 Sum_probs=25.3
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 85 m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
|+|||+|.|.|.||..+...|. .. .+|..+..
T Consensus 1 M~mkI~IiGaGa~G~~~a~~L~-~g---~~V~~~~r 32 (307)
T 3ego_A 1 MSLKIGIIGGGSVGLLCAYYLS-LY---HDVTVVTR 32 (307)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TT---SEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHh-cC---CceEEEEC
Confidence 6789999999999999998887 43 47666654
No 151
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=87.68 E-value=0.4 Score=47.60 Aligned_cols=32 Identities=16% Similarity=0.250 Sum_probs=26.5
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
..+|||+|+|+||+.+.+.|... .++|++.+.
T Consensus 139 g~tvGIiG~G~IG~~vA~~l~~~---G~~V~~~dr 170 (315)
T 3pp8_A 139 EFSVGIMGAGVLGAKVAESLQAW---GFPLRCWSR 170 (315)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTT---TCCEEEEES
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC---CCEEEEEcC
Confidence 35899999999999999998754 378877764
No 152
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=87.59 E-value=0.49 Score=43.48 Aligned_cols=34 Identities=18% Similarity=0.261 Sum_probs=26.5
Q ss_pred ceeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 85 m~ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
|+.+|.|.| .|.||+.+++.|.++. ..+|+++..
T Consensus 22 ~mk~vlVtGatG~iG~~l~~~L~~~G--~~~V~~~~R 56 (236)
T 3qvo_A 22 HMKNVLILGAGGQIARHVINQLADKQ--TIKQTLFAR 56 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCT--TEEEEEEES
T ss_pred cccEEEEEeCCcHHHHHHHHHHHhCC--CceEEEEEc
Confidence 345899999 9999999999998753 257776654
No 153
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=87.42 E-value=0.47 Score=46.68 Aligned_cols=32 Identities=25% Similarity=0.241 Sum_probs=25.8
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
..+|||+|+|+||+.+.+.|.... ++|++.+.
T Consensus 124 g~~vgIIG~G~IG~~~A~~l~~~G---~~V~~~dr 155 (303)
T 1qp8_A 124 GEKVAVLGLGEIGTRVGKILAALG---AQVRGFSR 155 (303)
T ss_dssp TCEEEEESCSTHHHHHHHHHHHTT---CEEEEECS
T ss_pred CCEEEEEccCHHHHHHHHHHHHCC---CEEEEECC
Confidence 358999999999999999987653 68766653
No 154
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=87.40 E-value=0.64 Score=38.43 Aligned_cols=31 Identities=23% Similarity=0.539 Sum_probs=26.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
+||+|.|+|++|+.+++.|.+.. .+|+.+..
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g---~~v~~~d~ 35 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKG---HDIVLIDI 35 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CeEEEEEC
Confidence 58999999999999999998753 57777754
No 155
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=87.38 E-value=0.48 Score=45.19 Aligned_cols=32 Identities=22% Similarity=0.381 Sum_probs=24.9
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 85 m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
|+|||+|.|+|.+|+.+++.|.... .+|..++
T Consensus 4 M~m~i~iiG~G~~G~~~a~~l~~~g---~~V~~~~ 35 (299)
T 1vpd_A 4 MTMKVGFIGLGIMGKPMSKNLLKAG---YSLVVSD 35 (299)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHTT---CEEEEEC
T ss_pred ccceEEEECchHHHHHHHHHHHhCC---CEEEEEe
Confidence 5679999999999999999988653 5765554
No 156
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=87.36 E-value=0.48 Score=47.25 Aligned_cols=32 Identities=25% Similarity=0.329 Sum_probs=26.9
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
..+|||+|+|+||+.+.+.|... .++|++.+.
T Consensus 137 gktvGIiGlG~IG~~vA~~l~~~---G~~V~~~dr 168 (324)
T 3evt_A 137 GQQLLIYGTGQIGQSLAAKASAL---GMHVIGVNT 168 (324)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT---TCEEEEEES
T ss_pred CCeEEEECcCHHHHHHHHHHHhC---CCEEEEECC
Confidence 35899999999999999998765 378888764
No 157
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=87.28 E-value=0.49 Score=47.25 Aligned_cols=32 Identities=22% Similarity=0.231 Sum_probs=26.8
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
..+|||+|+|+||+.+.+.|... .++|++.+.
T Consensus 140 g~tvGIIGlG~IG~~vA~~l~~~---G~~V~~~dr 171 (324)
T 3hg7_A 140 GRTLLILGTGSIGQHIAHTGKHF---GMKVLGVSR 171 (324)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT---TCEEEEECS
T ss_pred cceEEEEEECHHHHHHHHHHHhC---CCEEEEEcC
Confidence 35899999999999999999765 378888864
No 158
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=87.19 E-value=0.55 Score=39.62 Aligned_cols=31 Identities=16% Similarity=0.209 Sum_probs=26.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
.+|.|.|+|++|+.+++.|.++. .+++++..
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g---~~V~~id~ 37 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAG---KKVLAVDK 37 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT---CCEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CeEEEEEC
Confidence 48999999999999999998764 58887764
No 159
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=87.15 E-value=0.56 Score=43.31 Aligned_cols=33 Identities=21% Similarity=0.371 Sum_probs=26.8
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~ 121 (453)
++||+|.|.|.+|+.+++.|.+.. .+|+.+.+.
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g---~~V~~v~~r 55 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQ---IPAIIANSR 55 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTT---CCEEEECTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC---CEEEEEECC
Confidence 479999999999999999998753 577774554
No 160
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=87.15 E-value=0.86 Score=43.64 Aligned_cols=161 Identities=19% Similarity=0.224 Sum_probs=90.4
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeC
Q 012940 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (453)
Q Consensus 86 ~ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~ 164 (453)
.||-.|+| +||.||.+.+++.. ++++||+.-|. .++
T Consensus 12 ~~~~~v~Ga~GrMG~~i~~~~~~---~~~elv~~id~--------------------------~~~-------------- 48 (228)
T 1vm6_A 12 HMKYGIVGYSGRMGQEIQKVFSE---KGHELVLKVDV--------------------------NGV-------------- 48 (228)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH---TTCEEEEEEET--------------------------TEE--------------
T ss_pred cceeEEEEecCHHHHHHHHHHhC---CCCEEEEEEcC--------------------------CCc--------------
Confidence 46889999 79999999887643 34788776432 000
Q ss_pred CCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEE-eCCCCCCCCCeEEeccCccccCccCCeEEecCCcc--
Q 012940 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVII-TAPAKGADIPTYVVGVNEKDYDHEVANIVSNASCT-- 241 (453)
Q Consensus 165 ~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVII-Saps~d~dvPtvV~gVN~~~~~~~~~~IVSnaSCT-- 241 (453)
+++ . +.|+|||-|-.....+.+...++.|.. +|| |..-.++.. -.+ +.+... ..++-+||=+
T Consensus 49 ---~~l--~--~~DVvIDFT~P~a~~~~~~~~~~~g~~-~ViGTTG~~~~~~-~~l-----~~~a~~-~~vv~apNfSlG 113 (228)
T 1vm6_A 49 ---EEL--D--SPDVVIDFSSPEALPKTVDLCKKYRAG-LVLGTTALKEEHL-QML-----RELSKE-VPVVQAYNFSIG 113 (228)
T ss_dssp ---EEC--S--CCSEEEECSCGGGHHHHHHHHHHHTCE-EEECCCSCCHHHH-HHH-----HHHTTT-SEEEECSCCCHH
T ss_pred ---ccc--c--CCCEEEECCCHHHHHHHHHHHHHcCCC-EEEeCCCCCHHHH-HHH-----HHHHhh-CCEEEeccccHH
Confidence 011 1 469999888777788888889999974 455 222111000 000 011112 4566555544
Q ss_pred hhhhhhHHHHHhhhcCeeEEEEEeeeccccchhhhccccccchhhhhhhhccccCCCchhHHHHhhccccCCceeEEEEE
Q 012940 242 TNCLAPFVKVMDEELGIVKGAMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVMPQLKGKLNGIALR 321 (453)
Q Consensus 242 Tn~Lapvlk~L~d~fGI~~~~mTTiha~Tg~Q~llD~~~~d~rr~Raaa~NIIPt~tGaakav~kVlPeL~gKisgtavR 321 (453)
.|-|.-+++.+-+.|.==.+.|.-.|-- ++ +|. | +|.|..+.+.++ +.|.-.++|
T Consensus 114 vnll~~l~~~aA~~l~~ydiEIiE~HH~---~K-~DA----------------P--SGTAl~lae~i~---~~I~i~svR 168 (228)
T 1vm6_A 114 INVLKRFLSELVKVLEDWDVEIVETHHR---FK-KDA----------------P--SGTAILLESALG---KSVPIHSLR 168 (228)
T ss_dssp HHHHHHHHHHHHHHTTTSEEEEEEEECT---TC-CCS----------------S--CHHHHHHHHHTT---SCCCEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEcCCC---CC-CCC----------------C--CHHHHHHHHhcc---cCCCEEEEE
Confidence 3444444444444441002334444432 22 233 3 366666777774 357778999
Q ss_pred eeecceeE
Q 012940 322 VPTPNVSV 329 (453)
Q Consensus 322 VPv~~gs~ 329 (453)
.|-..++-
T Consensus 169 ~g~ivg~H 176 (228)
T 1vm6_A 169 VGGVPGDH 176 (228)
T ss_dssp CTTCCCEE
T ss_pred CCCCcEEE
Confidence 99877764
No 161
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=87.14 E-value=0.5 Score=47.01 Aligned_cols=32 Identities=31% Similarity=0.489 Sum_probs=26.3
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
..+|||+|+|+||+.+++.+.... ++|++.+.
T Consensus 146 g~~vgIiG~G~IG~~~A~~l~~~G---~~V~~~d~ 177 (331)
T 1xdw_A 146 NCTVGVVGLGRIGRVAAQIFHGMG---ATVIGEDV 177 (331)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHHCC---CEEEEECC
Confidence 458999999999999999987643 68777764
No 162
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=87.04 E-value=0.51 Score=47.50 Aligned_cols=33 Identities=21% Similarity=0.373 Sum_probs=27.2
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~ 121 (453)
..+|||+|+|+||+.+.+.+... .++|++.+..
T Consensus 148 gktvgIiGlG~IG~~vA~~l~~~---G~~V~~~d~~ 180 (343)
T 2yq5_A 148 NLTVGLIGVGHIGSAVAEIFSAM---GAKVIAYDVA 180 (343)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT---TCEEEEECSS
T ss_pred CCeEEEEecCHHHHHHHHHHhhC---CCEEEEECCC
Confidence 35899999999999999998765 3788887653
No 163
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=86.91 E-value=0.56 Score=48.67 Aligned_cols=34 Identities=21% Similarity=0.385 Sum_probs=29.7
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSG 122 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~ 122 (453)
..||+|-|||-||+.+++.|.+.. ..||+|.|..
T Consensus 212 g~~vaVqG~GnVG~~~a~~L~~~G---akvVavsD~~ 245 (421)
T 2yfq_A 212 DAKIAVQGFGNVGTFTVKNIERQG---GKVCAIAEWD 245 (421)
T ss_dssp GSCEEEECCSHHHHHHHHHHHHTT---CCEEECCBCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCC---CEEEEEEecC
Confidence 368999999999999999998864 6999999874
No 164
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=86.86 E-value=0.53 Score=46.88 Aligned_cols=32 Identities=22% Similarity=0.426 Sum_probs=26.2
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
..+|||+|+|+||+.+++.+.... ++|++.+.
T Consensus 145 g~~vgIiG~G~IG~~~A~~l~~~G---~~V~~~d~ 176 (333)
T 1dxy_A 145 QQTVGVMGTGHIGQVAIKLFKGFG---AKVIAYDP 176 (333)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHHCC---CEEEEECC
Confidence 458999999999999999987653 68777754
No 165
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=86.83 E-value=0.53 Score=47.46 Aligned_cols=32 Identities=22% Similarity=0.330 Sum_probs=26.7
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
..+|||+|+|+||+.+.+.|... .++|++.+.
T Consensus 160 g~tvGIIGlG~IG~~vA~~l~~~---G~~V~~~d~ 191 (352)
T 3gg9_A 160 GQTLGIFGYGKIGQLVAGYGRAF---GMNVLVWGR 191 (352)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT---TCEEEEECS
T ss_pred CCEEEEEeECHHHHHHHHHHHhC---CCEEEEECC
Confidence 45899999999999999998765 378888764
No 166
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=86.61 E-value=0.56 Score=46.92 Aligned_cols=32 Identities=22% Similarity=0.336 Sum_probs=26.5
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
..+|||+|+|+||+.+.+.|... .++|++.+.
T Consensus 165 g~tvgIIGlG~IG~~vA~~l~~~---G~~V~~~d~ 196 (335)
T 2g76_A 165 GKTLGILGLGRIGREVATRMQSF---GMKTIGYDP 196 (335)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT---TCEEEEECS
T ss_pred cCEEEEEeECHHHHHHHHHHHHC---CCEEEEECC
Confidence 35899999999999999998754 378888764
No 167
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=86.57 E-value=0.56 Score=44.35 Aligned_cols=32 Identities=25% Similarity=0.248 Sum_probs=26.2
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
++|.|.| +|.||+.+++.|.++. ..+|+++..
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g--~~~V~~~~R 38 (299)
T 2wm3_A 6 KLVVVFGGTGAQGGSVARTLLEDG--TFKVRVVTR 38 (299)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHC--SSEEEEEES
T ss_pred CEEEEECCCchHHHHHHHHHHhcC--CceEEEEEc
Confidence 5899999 8999999999998753 258877764
No 168
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=86.40 E-value=0.52 Score=47.55 Aligned_cols=32 Identities=19% Similarity=0.267 Sum_probs=26.3
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
..+|||+|+|+||+.+++.|... .++|++.+.
T Consensus 164 gktvGIIG~G~IG~~vA~~l~~~---G~~V~~~dr 195 (351)
T 3jtm_A 164 GKTIGTVGAGRIGKLLLQRLKPF---GCNLLYHDR 195 (351)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGG---CCEEEEECS
T ss_pred CCEEeEEEeCHHHHHHHHHHHHC---CCEEEEeCC
Confidence 35899999999999999998754 378877764
No 169
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=86.26 E-value=0.57 Score=43.80 Aligned_cols=35 Identities=11% Similarity=0.259 Sum_probs=25.9
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCC-CCceEEEEc
Q 012940 85 AKLKVAINGFGRIGRNFLRCWHGRKD-SPLDVVVVN 119 (453)
Q Consensus 85 m~ikVaInGfGrIGR~vlr~l~~r~~-~~ieiVaIn 119 (453)
|++||+|+|.|.+|+.+++.|..... +.-+|...+
T Consensus 1 M~~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~ 36 (247)
T 3gt0_A 1 MDKQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSD 36 (247)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEEC
T ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEe
Confidence 55799999999999999999987531 111655554
No 170
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=86.12 E-value=0.63 Score=48.12 Aligned_cols=32 Identities=31% Similarity=0.489 Sum_probs=28.4
Q ss_pred eeEEEEcCChhHHHHHHHHHh-CCCCCceEEEEcCC
Q 012940 87 LKVAINGFGRIGRNFLRCWHG-RKDSPLDVVVVNDS 121 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~-r~~~~ieiVaInd~ 121 (453)
.+|+|.|||+||+.+++.|.+ .. ++|++++|+
T Consensus 213 ktvgI~G~G~VG~~vA~~l~~~~G---~kVv~~sD~ 245 (419)
T 1gtm_A 213 KTIAIQGYGNAGYYLAKIMSEDFG---MKVVAVSDS 245 (419)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC---CEEEEEECS
T ss_pred CEEEEEcCCHHHHHHHHHHHHhcC---CEEEEEeCC
Confidence 489999999999999999987 53 799999886
No 171
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=86.10 E-value=0.55 Score=47.71 Aligned_cols=32 Identities=25% Similarity=0.478 Sum_probs=26.1
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
..+|||+|+|+||+.+++.+... .++|++.+.
T Consensus 176 gktvGIIGlG~IG~~vA~~l~~f---G~~V~~~d~ 207 (365)
T 4hy3_A 176 GSEIGIVGFGDLGKALRRVLSGF---RARIRVFDP 207 (365)
T ss_dssp SSEEEEECCSHHHHHHHHHHTTS---CCEEEEECS
T ss_pred CCEEEEecCCcccHHHHHhhhhC---CCEEEEECC
Confidence 35899999999999999988643 378887764
No 172
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=86.05 E-value=0.48 Score=47.24 Aligned_cols=33 Identities=18% Similarity=0.228 Sum_probs=26.5
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~ 121 (453)
..+|||+|+|+||+.+.+.|... .++|++.+..
T Consensus 145 g~tvGIIG~G~IG~~vA~~l~~~---G~~V~~~d~~ 177 (330)
T 4e5n_A 145 NATVGFLGMGAIGLAMADRLQGW---GATLQYHEAK 177 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHTTTS---CCEEEEECSS
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC---CCEEEEECCC
Confidence 45899999999999999987643 3788877643
No 173
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=86.02 E-value=0.63 Score=46.81 Aligned_cols=32 Identities=19% Similarity=0.289 Sum_probs=26.2
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
..+|||+|+|+||+.+.+.|... .++|++.+.
T Consensus 168 g~tvGIIG~G~IG~~vA~~l~~~---G~~V~~~d~ 199 (347)
T 1mx3_A 168 GETLGIIGLGRVGQAVALRAKAF---GFNVLFYDP 199 (347)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT---TCEEEEECT
T ss_pred CCEEEEEeECHHHHHHHHHHHHC---CCEEEEECC
Confidence 35899999999999999998754 378877753
No 174
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=85.99 E-value=0.99 Score=43.37 Aligned_cols=35 Identities=17% Similarity=0.363 Sum_probs=28.3
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcCC
Q 012940 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (453)
Q Consensus 86 ~ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd~ 121 (453)
++||.|.| +|.||+.+++.|.++. ..++|+++...
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~g-~~~~v~~~~~~ 59 (346)
T 4egb_A 24 AMNILVTGGAGFIGSNFVHYMLQSY-ETYKIINFDAL 59 (346)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHC-TTEEEEEEECC
T ss_pred CCeEEEECCccHHHHHHHHHHHhhC-CCcEEEEEecc
Confidence 46899999 8999999999998763 24788888653
No 175
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=85.97 E-value=0.64 Score=45.99 Aligned_cols=32 Identities=25% Similarity=0.480 Sum_probs=26.6
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
..+|||+|+|+||+.+++.|... .++|++.+.
T Consensus 146 g~~vgIIG~G~IG~~~A~~l~~~---G~~V~~~d~ 177 (320)
T 1gdh_A 146 NKTLGIYGFGSIGQALAKRAQGF---DMDIDYFDT 177 (320)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT---TCEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHHC---CCEEEEECC
Confidence 45899999999999999998754 378888775
No 176
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=85.86 E-value=1.3 Score=46.37 Aligned_cols=103 Identities=17% Similarity=0.226 Sum_probs=63.0
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCC---------CChhhhhhhhccccce-eecCceEEEecCCeEEEC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS---------GGVKNASHLLKYDSLL-GTFKADVKIVDNETISVD 155 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~---------~~~~~~a~LlkyDS~~-G~f~~~v~~~~~~~l~v~ 155 (453)
..||+|-|||.||..+++.|.+.. -.||+|.|. .+.+.+..+.++...+ ++...-+. .. .+
T Consensus 239 g~~VaVQG~GnVG~~aa~~L~e~G---akvVavsD~~G~iyd~~Gld~~~l~~~~~~k~~~~~~v~~~~~--~~----~~ 309 (456)
T 3r3j_A 239 NKKCLVSGSGNVAQYLVEKLIEKG---AIVLTMSDSNGYILEPNGFTKEQLNYIMDIKNNQRLRLKEYLK--YS----KT 309 (456)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHHT---CCBCCEECSSCEEECTTCCCHHHHHHHHHHHHTSCCCGGGGGG--TC----SS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC---CEEEEEECCCCcEECCCCCCHHHHHHHHHHHHhcCcchhhhhh--cC----CC
Confidence 358999999999999999988753 477888874 2444554443222211 11111000 00 01
Q ss_pred CeEEEEEeCCCCCCCCccccCccEEEcCC-CCCCChhhHHHHHHcCCCEEEE
Q 012940 156 GKLIKVVSNRDPLQLPWAELGIDIVIEGT-GVFVDGPGAGKHIQAGAKKVII 206 (453)
Q Consensus 156 Gk~I~v~~~~dp~~l~W~~~gvDiVie~T-G~f~s~e~a~~hl~aGAkkVII 206 (453)
.+ .. ++++ .|. ..+||.+=|+ +..++.+.+++.++.+|| +|+
T Consensus 310 a~---~v---~~~~-i~~-~~~DI~iPcA~~~~I~~~na~~l~~~~ak-~V~ 352 (456)
T 3r3j_A 310 AK---YF---ENQK-PWN-IPCDIAFPCATQNEINENDADLFIQNKCK-MIV 352 (456)
T ss_dssp CE---EE---CSCC-GGG-SCCSEEEECSCTTCBCHHHHHHHHHHTCC-EEE
T ss_pred ce---Ee---CCcc-ccc-cCccEEEeCCCccchhhHHHHHHHhcCCe-EEE
Confidence 11 11 1223 375 5799999885 778999999988888885 555
No 177
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=85.85 E-value=0.66 Score=45.78 Aligned_cols=32 Identities=25% Similarity=0.344 Sum_probs=26.0
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
..+|||+|+|+||+.+.+.|.... ++|++.+.
T Consensus 144 g~~vgIIG~G~IG~~~A~~l~~~G---~~V~~~d~ 175 (311)
T 2cuk_A 144 GLTLGLVGMGRIGQAVAKRALAFG---MRVVYHAR 175 (311)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CCEEEEEEECHHHHHHHHHHHHCC---CEEEEECC
Confidence 458999999999999999987653 68776653
No 178
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=85.83 E-value=0.53 Score=46.25 Aligned_cols=31 Identities=23% Similarity=0.357 Sum_probs=26.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
.+|||+|+|+||+.+.+.|.... ++|++.+.
T Consensus 123 ~tvGIIGlG~IG~~vA~~l~~~G---~~V~~~dr 153 (290)
T 3gvx_A 123 KALGILGYGGIGRRVAHLAKAFG---MRVIAYTR 153 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT---CEEEEECS
T ss_pred chheeeccCchhHHHHHHHHhhC---cEEEEEec
Confidence 58999999999999999987643 68888764
No 179
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=85.82 E-value=0.65 Score=46.67 Aligned_cols=32 Identities=22% Similarity=0.317 Sum_probs=25.8
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
..+|||+|+|+||+.+++.+... .++|++.+.
T Consensus 171 gktiGIIGlG~IG~~vA~~l~~~---G~~V~~~dr 202 (340)
T 4dgs_A 171 GKRIGVLGLGQIGRALASRAEAF---GMSVRYWNR 202 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT---TCEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHC---CCEEEEEcC
Confidence 35899999999999999998754 368776653
No 180
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=85.78 E-value=6.8 Score=37.50 Aligned_cols=32 Identities=22% Similarity=0.358 Sum_probs=26.6
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
++||.|.| .|.||+.+++.|.++. .+|+++..
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 59 (343)
T 2b69_A 27 RKRILITGGAGFVGSHLTDKLMMDG---HEVTVVDN 59 (343)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred CCEEEEEcCccHHHHHHHHHHHHCC---CEEEEEeC
Confidence 35899999 8999999999998763 58877754
No 181
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=85.60 E-value=0.71 Score=43.78 Aligned_cols=33 Identities=27% Similarity=0.441 Sum_probs=25.9
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 85 m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
|+|||+|.|.|.+|..+.+.|.... .+|+.++.
T Consensus 2 ~~m~i~iiG~G~~G~~~a~~l~~~g---~~V~~~~r 34 (316)
T 2ew2_A 2 NAMKIAIAGAGAMGSRLGIMLHQGG---NDVTLIDQ 34 (316)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CCCeEEEECcCHHHHHHHHHHHhCC---CcEEEEEC
Confidence 4579999999999999999988753 47777754
No 182
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=85.39 E-value=0.72 Score=45.38 Aligned_cols=33 Identities=21% Similarity=0.421 Sum_probs=27.0
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~ 121 (453)
..+|||+|+|+||+.+.+.|.... ++|++.+..
T Consensus 142 g~~vgIiG~G~IG~~~A~~l~~~G---~~V~~~d~~ 174 (307)
T 1wwk_A 142 GKTIGIIGFGRIGYQVAKIANALG---MNILLYDPY 174 (307)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT---CEEEEECSS
T ss_pred CceEEEEccCHHHHHHHHHHHHCC---CEEEEECCC
Confidence 358999999999999999987653 688777643
No 183
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=85.07 E-value=0.6 Score=42.65 Aligned_cols=31 Identities=32% Similarity=0.381 Sum_probs=26.6
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
|||.|.|+|++|+.+++.|.++. .+++.|..
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g---~~v~vid~ 31 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRK---YGVVIINK 31 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTT---CCEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CeEEEEEC
Confidence 48999999999999999998763 58888864
No 184
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=85.01 E-value=0.75 Score=45.75 Aligned_cols=33 Identities=24% Similarity=0.362 Sum_probs=27.1
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~ 121 (453)
..+|||+|+|+||+.+++.+.... ++|++.+..
T Consensus 146 g~~vgIiG~G~IG~~~A~~l~~~G---~~V~~~d~~ 178 (333)
T 1j4a_A 146 DQVVGVVGTGHIGQVFMQIMEGFG---AKVITYDIF 178 (333)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHTT---CEEEEECSS
T ss_pred CCEEEEEccCHHHHHHHHHHHHCC---CEEEEECCC
Confidence 458999999999999999987653 688877653
No 185
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=84.85 E-value=1.2 Score=46.76 Aligned_cols=102 Identities=20% Similarity=0.253 Sum_probs=63.9
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCC---------CChhhhhhhhc-cccceeecCceEEEecCCeEEEC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS---------GGVKNASHLLK-YDSLLGTFKADVKIVDNETISVD 155 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~---------~~~~~~a~Llk-yDS~~G~f~~~v~~~~~~~l~v~ 155 (453)
..||+|=|||.||..+++.|.+.. -.||+|.|. .+.+.+..|++ ..+..|+...-.+ + ++
T Consensus 235 Gk~vaVQG~GnVG~~aa~~L~e~G---akvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~~~~~--~-----~g 304 (450)
T 4fcc_A 235 GMRVSVSGSGNVAQYAIEKAMEFG---ARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVADYAK--E-----FG 304 (450)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT---CEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHHHHHH--H-----HT
T ss_pred CCEEEEeCCChHHHHHHHHHHhcC---CeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccccccc--c-----CC
Confidence 358999999999999999998864 589988764 23445555542 1222222111000 0 11
Q ss_pred CeEEEEEeCCCCCCCCccccCccEEEcCC-CCCCChhhHHHHHHcCCCEEEE
Q 012940 156 GKLIKVVSNRDPLQLPWAELGIDIVIEGT-GVFVDGPGAGKHIQAGAKKVII 206 (453)
Q Consensus 156 Gk~I~v~~~~dp~~l~W~~~gvDiVie~T-G~f~s~e~a~~hl~aGAkkVII 206 (453)
.+ ... +++ .|. ..+||.+=|+ +..++.+.++.....||| +|+
T Consensus 305 ~~---~~~---~~~-i~~-~~~DI~iPcAl~~~I~~~~a~~L~a~g~k-~Ia 347 (450)
T 4fcc_A 305 LV---YLE---GQQ-PWS-VPVDIALPCATQNELDVDAAHQLIANGVK-AVA 347 (450)
T ss_dssp CE---EEE---TCC-GGG-SCCSEEEECSCTTCBCHHHHHHHHHTTCC-EEE
T ss_pred cE---Eec---Ccc-ccc-CCccEEeeccccccccHHHHHHHHhcCce-EEe
Confidence 11 111 222 365 5799999875 778999999988888985 444
No 186
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=84.81 E-value=1 Score=44.14 Aligned_cols=88 Identities=18% Similarity=0.178 Sum_probs=57.4
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEE-EEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEe
Q 012940 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVV-VVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (453)
Q Consensus 86 ~ikVaInG-fGrIGR~vlr~l~~r~~~~ieiV-aInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~ 163 (453)
+.||+|.| .|+.|+.+++.+.+.. +++| .|| +.. .++. +.| ++++
T Consensus 13 ~~~v~V~Gasg~~G~~~~~~l~~~g---~~~V~~Vn-P~~------------------------~g~~--i~G--~~vy- 59 (294)
T 2yv1_A 13 NTKAIVQGITGRQGSFHTKKMLECG---TKIVGGVT-PGK------------------------GGQN--VHG--VPVF- 59 (294)
T ss_dssp TCCEEEETTTSHHHHHHHHHHHHTT---CCEEEEEC-TTC------------------------TTCE--ETT--EEEE-
T ss_pred CCEEEEECCCCCHHHHHHHHHHhCC---CeEEEEeC-CCC------------------------CCce--ECC--Eeee-
Confidence 46899999 5999999999988753 4544 555 300 0111 233 2343
Q ss_pred CCCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEE-eC
Q 012940 164 NRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVII-TA 208 (453)
Q Consensus 164 ~~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVII-Sa 208 (453)
.+.++++- +.++|+++.++......+.+...+++|++.+|+ |.
T Consensus 60 -~sl~el~~-~~~~Dv~ii~vp~~~~~~~v~ea~~~Gi~~vVi~t~ 103 (294)
T 2yv1_A 60 -DTVKEAVK-ETDANASVIFVPAPFAKDAVFEAIDAGIELIVVITE 103 (294)
T ss_dssp -SSHHHHHH-HHCCCEEEECCCHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred -CCHHHHhh-cCCCCEEEEccCHHHHHHHHHHHHHCCCCEEEEECC
Confidence 23333331 126899999999888888888899999985554 54
No 187
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=84.79 E-value=0.79 Score=45.20 Aligned_cols=33 Identities=24% Similarity=0.302 Sum_probs=27.0
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~ 121 (453)
..+|||+|+|+||+.+.+.|.... ++|++.+..
T Consensus 142 g~~vgIIG~G~IG~~~A~~l~~~G---~~V~~~d~~ 174 (313)
T 2ekl_A 142 GKTIGIVGFGRIGTKVGIIANAMG---MKVLAYDIL 174 (313)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHTT---CEEEEECSS
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCC---CEEEEECCC
Confidence 458999999999999999987653 688777643
No 188
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=84.72 E-value=0.77 Score=46.91 Aligned_cols=31 Identities=19% Similarity=0.418 Sum_probs=25.4
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
..+|||+|+|+||+.+.+.|.... ++|++.+
T Consensus 116 g~tvGIIGlG~IG~~vA~~l~~~G---~~V~~~d 146 (380)
T 2o4c_A 116 ERTYGVVGAGQVGGRLVEVLRGLG---WKVLVCD 146 (380)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CCEEEEEeCCHHHHHHHHHHHHCC---CEEEEEc
Confidence 358999999999999999987653 6876664
No 189
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=84.72 E-value=0.9 Score=43.32 Aligned_cols=33 Identities=24% Similarity=0.336 Sum_probs=26.9
Q ss_pred ceeeEEEEcC-ChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 85 AKLKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 85 m~ikVaInGf-GrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
|++||+|+|. |.+|+.+++.|.... .+|+.++.
T Consensus 10 mmm~I~iIG~tG~mG~~la~~l~~~g---~~V~~~~r 43 (286)
T 3c24_A 10 GPKTVAILGAGGKMGARITRKIHDSA---HHLAAIEI 43 (286)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHSS---SEEEEECC
T ss_pred cCCEEEEECCCCHHHHHHHHHHHhCC---CEEEEEEC
Confidence 4579999999 999999999998753 57776653
No 190
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=84.61 E-value=0.78 Score=46.95 Aligned_cols=31 Identities=13% Similarity=0.328 Sum_probs=25.7
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
..+|||+|+|+||+.+.+.|.... ++|++.+
T Consensus 119 gktvGIIGlG~IG~~vA~~l~a~G---~~V~~~d 149 (381)
T 3oet_A 119 DRTIGIVGVGNVGSRLQTRLEALG---IRTLLCD 149 (381)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CCEEEEEeECHHHHHHHHHHHHCC---CEEEEEC
Confidence 358999999999999999998653 7877764
No 191
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=84.37 E-value=0.81 Score=46.99 Aligned_cols=32 Identities=22% Similarity=0.218 Sum_probs=26.2
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
..+|||+|+|+||+.+.+.+.... ++|++.+.
T Consensus 145 gktlGiIGlG~IG~~vA~~l~~~G---~~V~~~d~ 176 (404)
T 1sc6_A 145 GKKLGIIGYGHIGTQLGILAESLG---MYVYFYDI 176 (404)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CCEEEEEeECHHHHHHHHHHHHCC---CEEEEEcC
Confidence 358999999999999999987653 78877753
No 192
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=84.37 E-value=0.84 Score=45.67 Aligned_cols=31 Identities=19% Similarity=0.237 Sum_probs=25.7
Q ss_pred eeEEEEcCChhHHHHHHHHH-hCCCCCceEEEEcC
Q 012940 87 LKVAINGFGRIGRNFLRCWH-GRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~-~r~~~~ieiVaInd 120 (453)
.+|||+|+|+||+.+++.+. ... ++|++.+.
T Consensus 164 ~~vgIIG~G~IG~~vA~~l~~~~G---~~V~~~d~ 195 (348)
T 2w2k_A 164 HVLGAVGLGAIQKEIARKAVHGLG---MKLVYYDV 195 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC---CEEEEECS
T ss_pred CEEEEEEECHHHHHHHHHHHHhcC---CEEEEECC
Confidence 58999999999999999987 543 68877764
No 193
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=84.28 E-value=1.4 Score=45.56 Aligned_cols=33 Identities=24% Similarity=0.363 Sum_probs=29.0
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~ 121 (453)
..+|+|-|||-+|+.+++.|.+.. ..||+|.|.
T Consensus 218 gk~vaVqG~GnVG~~~a~~L~~~G---akVVavsD~ 250 (419)
T 3aoe_E 218 GARVVVQGLGQVGAAVALHAERLG---MRVVAVATS 250 (419)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT---CEEEEEEET
T ss_pred CCEEEEECcCHHHHHHHHHHHHCC---CEEEEEEcC
Confidence 358999999999999999998763 699999886
No 194
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=84.28 E-value=1.4 Score=43.18 Aligned_cols=88 Identities=22% Similarity=0.211 Sum_probs=57.5
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEE-EEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEe
Q 012940 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVV-VVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (453)
Q Consensus 86 ~ikVaInG-fGrIGR~vlr~l~~r~~~~ieiV-aInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~ 163 (453)
+.||+|.| .|+.|+.+++.+.+.. +++| .|| +.. .++. +.| ++++
T Consensus 13 ~~~vvV~Gasg~~G~~~~~~l~~~g---~~~v~~Vn-P~~------------------------~g~~--i~G--~~vy- 59 (297)
T 2yv2_A 13 ETRVLVQGITGREGSFHAKAMLEYG---TKVVAGVT-PGK------------------------GGSE--VHG--VPVY- 59 (297)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHT---CEEEEEEC-TTC------------------------TTCE--ETT--EEEE-
T ss_pred CCEEEEECCCCCHHHHHHHHHHhCC---CcEEEEeC-CCC------------------------CCce--ECC--Eeee-
Confidence 46899999 5999999999887653 4544 555 300 0011 233 2343
Q ss_pred CCCCCCCCccccC-ccEEEcCCCCCCChhhHHHHHHcCCCEEEE-eC
Q 012940 164 NRDPLQLPWAELG-IDIVIEGTGVFVDGPGAGKHIQAGAKKVII-TA 208 (453)
Q Consensus 164 ~~dp~~l~W~~~g-vDiVie~TG~f~s~e~a~~hl~aGAkkVII-Sa 208 (453)
.+.++++- +.+ +|+++.++......+.+...+++|++.+|+ |.
T Consensus 60 -~sl~el~~-~~~~~DvaIi~vp~~~~~~~v~ea~~~Gi~~vVi~t~ 104 (297)
T 2yv2_A 60 -DSVKEALA-EHPEINTSIVFVPAPFAPDAVYEAVDAGIRLVVVITE 104 (297)
T ss_dssp -SSHHHHHH-HCTTCCEEEECCCGGGHHHHHHHHHHTTCSEEEECCC
T ss_pred -CCHHHHhh-cCCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEEECC
Confidence 22333331 113 899999999988889999999999985555 54
No 195
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=84.16 E-value=0.87 Score=44.64 Aligned_cols=36 Identities=17% Similarity=0.250 Sum_probs=28.1
Q ss_pred ccceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 83 TVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 83 ~~m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
+.|++||||+|+|.+|..+.+.|.... ..+|++.+.
T Consensus 21 ~~M~m~IgvIG~G~mG~~lA~~L~~~G--~~~V~~~dr 56 (317)
T 4ezb_A 21 QSMMTTIAFIGFGEAAQSIAGGLGGRN--AARLAAYDL 56 (317)
T ss_dssp HTSCCEEEEECCSHHHHHHHHHHHTTT--CSEEEEECG
T ss_pred cccCCeEEEECccHHHHHHHHHHHHcC--CCeEEEEeC
Confidence 346789999999999999999998653 147776653
No 196
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=84.02 E-value=1 Score=38.76 Aligned_cols=31 Identities=16% Similarity=0.207 Sum_probs=26.2
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
-+|.|.|+|++|+.+++.|.++. .+++.|..
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g---~~V~vid~ 34 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRG---QNVTVISN 34 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT---CCEEEEEC
T ss_pred CcEEEECCCHHHHHHHHHHHHCC---CCEEEEEC
Confidence 47999999999999999998753 58888864
No 197
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=83.60 E-value=2.2 Score=44.51 Aligned_cols=95 Identities=21% Similarity=0.407 Sum_probs=57.7
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCC---------ChhhhhhhhccccceeecCceEEEecCCeEEECC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSG---------GVKNASHLLKYDSLLGTFKADVKIVDNETISVDG 156 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~---------~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~G 156 (453)
..||+|-|||-||+.+++.|.+.. ..||+|.|.. +++. |+++-..+|.+.. + .+ .
T Consensus 235 g~~vaVqGfGnVG~~~a~~L~e~G---akvVavsD~~G~i~dp~Gld~~~---l~~~~~~~g~i~~---y-~~------a 298 (440)
T 3aog_A 235 GARVAIQGFGNVGNAAARAFHDHG---ARVVAVQDHTGTVYNEAGIDPYD---LLRHVQEFGGVRG---Y-PK------A 298 (440)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT---CEEEEEECSSCEEECTTCCCHHH---HHHHHHHTSSSTT---C-TT------S
T ss_pred CCEEEEeccCHHHHHHHHHHHHCC---CEEEEEEcCCcEEECCCCCCHHH---HHHHHHhcCCccc---C-CC------c
Confidence 368999999999999999998864 6999999862 3333 2322112332211 0 11 1
Q ss_pred eEEEEEeCCCCCCCCccccCccEEEcCC-CCCCChhhHHHHHHcCCCEEEEeC
Q 012940 157 KLIKVVSNRDPLQLPWAELGIDIVIEGT-GVFVDGPGAGKHIQAGAKKVIITA 208 (453)
Q Consensus 157 k~I~v~~~~dp~~l~W~~~gvDiVie~T-G~f~s~e~a~~hl~aGAkkVIISa 208 (453)
+.+ +++++ |. ..+||++.|+ +..++.+.+... +|| +|+-+
T Consensus 299 ~~i------~~~ei-~~-~~~DIlvPcA~~n~i~~~na~~l---~ak-~VvEg 339 (440)
T 3aog_A 299 EPL------PAADF-WG-LPVEFLVPAALEKQITEQNAWRI---RAR-IVAEG 339 (440)
T ss_dssp EEC------CHHHH-TT-CCCSEEEECSSSSCBCTTTGGGC---CCS-EEECC
T ss_pred eEc------Cchhh-hc-CCCcEEEecCCcCccchhhHHHc---CCc-EEEec
Confidence 111 11222 64 5799999997 556777776653 664 55543
No 198
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=83.57 E-value=0.84 Score=45.58 Aligned_cols=31 Identities=23% Similarity=0.261 Sum_probs=25.0
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
..+|||+|+|+||+.+++.|.... ++|++.+
T Consensus 164 g~~vgIIG~G~iG~~vA~~l~~~G---~~V~~~d 194 (333)
T 3ba1_A 164 GKRVGIIGLGRIGLAVAERAEAFD---CPISYFS 194 (333)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTTT---CCEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC---CEEEEEC
Confidence 358999999999999999987543 6776655
No 199
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=83.45 E-value=0.99 Score=44.35 Aligned_cols=35 Identities=17% Similarity=0.147 Sum_probs=26.8
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 85 m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
|.+||+|+|+|.||+.+.+.|..... ..+|++.+.
T Consensus 32 ~~~kI~IIG~G~mG~slA~~l~~~G~-~~~V~~~dr 66 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGSFAKSLRRSGF-KGKIYGYDI 66 (314)
T ss_dssp SCSEEEEESCSHHHHHHHHHHHHTTC-CSEEEEECS
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCC-CCEEEEEEC
Confidence 44699999999999999999987631 127766653
No 200
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=83.35 E-value=0.85 Score=46.78 Aligned_cols=32 Identities=22% Similarity=0.253 Sum_probs=26.2
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
..+|||+|+|+||+.+++.|... .++|++.+.
T Consensus 191 gktvGIIGlG~IG~~vA~~l~a~---G~~V~~~d~ 222 (393)
T 2nac_A 191 AMHVGTVAAGRIGLAVLRRLAPF---DVHLHYTDR 222 (393)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGG---TCEEEEECS
T ss_pred CCEEEEEeECHHHHHHHHHHHhC---CCEEEEEcC
Confidence 35899999999999999998754 278877764
No 201
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=83.32 E-value=1.9 Score=42.50 Aligned_cols=32 Identities=25% Similarity=0.288 Sum_probs=26.1
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
+++|.|.| +|.||+.+++.|.++. .+|+++..
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~R 37 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVG---HHVRAQVH 37 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTT---CCEEEEES
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC---CEEEEEEC
Confidence 45899999 8999999999998753 57777654
No 202
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=83.19 E-value=1 Score=44.75 Aligned_cols=32 Identities=22% Similarity=0.425 Sum_probs=26.5
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
.++|||+|+|+||+.+++.+.... ++|++.+.
T Consensus 150 g~~vgIIG~G~iG~~iA~~l~~~G---~~V~~~d~ 181 (334)
T 2dbq_A 150 GKTIGIIGLGRIGQAIAKRAKGFN---MRILYYSR 181 (334)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CCEEEEEccCHHHHHHHHHHHhCC---CEEEEECC
Confidence 358999999999999999988653 68877764
No 203
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=83.13 E-value=0.86 Score=45.11 Aligned_cols=32 Identities=25% Similarity=0.363 Sum_probs=26.0
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
.++|||+|+|+||+.+++.|.... ++|++.+.
T Consensus 155 g~~vgIIG~G~iG~~iA~~l~~~G---~~V~~~d~ 186 (330)
T 2gcg_A 155 QSTVGIIGLGRIGQAIARRLKPFG---VQRFLYTG 186 (330)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGGT---CCEEEEES
T ss_pred CCEEEEECcCHHHHHHHHHHHHCC---CEEEEECC
Confidence 358999999999999999987643 67777763
No 204
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=82.90 E-value=0.93 Score=45.07 Aligned_cols=32 Identities=25% Similarity=0.267 Sum_probs=26.1
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
..+|||+|+|+||+.+++.+.... ++|++.+.
T Consensus 146 g~~vgIIG~G~iG~~vA~~l~~~G---~~V~~~d~ 177 (333)
T 2d0i_A 146 GKKVGILGMGAIGKAIARRLIPFG---VKLYYWSR 177 (333)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGGT---CEEEEECS
T ss_pred cCEEEEEccCHHHHHHHHHHHHCC---CEEEEECC
Confidence 358999999999999999987543 68777764
No 205
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=82.75 E-value=0.8 Score=43.42 Aligned_cols=31 Identities=16% Similarity=0.234 Sum_probs=24.9
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
++||+|+|+|.+|+.+++.|.... .+|+.++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g---~~V~~~~ 33 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARAG---HQLHVTT 33 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHTT---CEEEECC
T ss_pred CCEEEEEccCHHHHHHHHHHHhCC---CEEEEEc
Confidence 369999999999999999988653 5776555
No 206
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=82.57 E-value=1.4 Score=38.04 Aligned_cols=31 Identities=29% Similarity=0.345 Sum_probs=26.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
.+|.|.|+|+||+.+++.|..+. .+|+++..
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g---~~V~vid~ 50 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSG---HSVVVVDK 50 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CcEEEECCCHHHHHHHHHHHhCC---CeEEEEEC
Confidence 58999999999999999998763 58877754
No 207
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=82.54 E-value=1.1 Score=41.33 Aligned_cols=32 Identities=31% Similarity=0.351 Sum_probs=25.3
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
++||+|.|+|.+|+.+++.|.... .+|+.++.
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g---~~V~~~~r 59 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSG---FKVVVGSR 59 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTT---CCEEEEES
T ss_pred CCEEEEEccCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 368999999999999999988653 47666653
No 208
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=82.21 E-value=1.2 Score=41.56 Aligned_cols=45 Identities=16% Similarity=0.346 Sum_probs=32.4
Q ss_pred cceeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC----CCChhhhhhhh
Q 012940 84 VAKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND----SGGVKNASHLL 131 (453)
Q Consensus 84 ~m~ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd----~~~~~~~a~Ll 131 (453)
.|+|||.|.| +|.||+.+++.|.++. .+|+++.. +.+.+.+..++
T Consensus 3 ~M~m~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~D~~d~~~~~~~~ 52 (287)
T 3sc6_A 3 AMKERVIITGANGQLGKQLQEELNPEE---YDIYPFDKKLLDITNISQVQQVV 52 (287)
T ss_dssp --CEEEEEESTTSHHHHHHHHHSCTTT---EEEEEECTTTSCTTCHHHHHHHH
T ss_pred cceeEEEEECCCCHHHHHHHHHHHhCC---CEEEEecccccCCCCHHHHHHHH
Confidence 3777999999 8999999999988653 68888853 34455554444
No 209
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=82.01 E-value=1.2 Score=41.70 Aligned_cols=30 Identities=13% Similarity=0.447 Sum_probs=23.5
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
|||+|+|+|.+|+.+++.|.... .+|...+
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g---~~v~~~~ 33 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTP---HELIISG 33 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSS---CEEEEEC
T ss_pred cEEEEECCCHHHHHHHHHHHhCC---CeEEEEC
Confidence 69999999999999999987542 3554443
No 210
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=81.85 E-value=1 Score=45.50 Aligned_cols=32 Identities=22% Similarity=0.175 Sum_probs=25.8
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCce-EEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLD-VVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ie-iVaInd 120 (453)
..+|||+|+|+||+.+++.|... .++ |++.+.
T Consensus 164 g~tvgIIG~G~IG~~vA~~l~~~---G~~~V~~~d~ 196 (364)
T 2j6i_A 164 GKTIATIGAGRIGYRVLERLVPF---NPKELLYYDY 196 (364)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGG---CCSEEEEECS
T ss_pred CCEEEEECcCHHHHHHHHHHHhC---CCcEEEEECC
Confidence 35899999999999999998754 266 777763
No 211
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=81.66 E-value=1.3 Score=42.76 Aligned_cols=33 Identities=21% Similarity=0.252 Sum_probs=26.7
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 85 m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
|++||+|+|+|.+|+.+.+.|.+.. .+|+..+.
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G---~~V~~~dr 38 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAG---LSTWGADL 38 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCC---CeEEEEEC
Confidence 4579999999999999999998753 58777753
No 212
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=81.63 E-value=1.2 Score=46.11 Aligned_cols=32 Identities=19% Similarity=0.244 Sum_probs=26.2
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
..+|||+|+|+||+.+.+.+.... ++|++.+.
T Consensus 156 gktvGIIGlG~IG~~vA~~l~~~G---~~V~~yd~ 187 (416)
T 3k5p_A 156 GKTLGIVGYGNIGSQVGNLAESLG---MTVRYYDT 187 (416)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT---CEEEEECT
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCC---CEEEEECC
Confidence 358999999999999999987653 78877753
No 213
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=81.26 E-value=1.3 Score=42.68 Aligned_cols=31 Identities=29% Similarity=0.384 Sum_probs=26.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
.+|+|+|+|+||+.+++.|.... ++|++.+.
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G---~~V~~~dr 186 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALG---AKVKVGAR 186 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEEeeCHHHHHHHHHHHhCC---CEEEEEEC
Confidence 48999999999999999987653 58777764
No 214
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=81.15 E-value=1.1 Score=39.59 Aligned_cols=32 Identities=25% Similarity=0.258 Sum_probs=26.5
Q ss_pred eeeEEEEcCChhHHHHHHHHHhC-CCCCceEEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGR-KDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r-~~~~ieiVaInd 120 (453)
..+|.|.|+|++|+.+++.|.+. . .+|+++..
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g---~~V~vid~ 71 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYG---KISLGIEI 71 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHC---SCEEEEES
T ss_pred CCcEEEECCCHHHHHHHHHHHhccC---CeEEEEEC
Confidence 45899999999999999999764 4 57888864
No 215
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=81.02 E-value=2.8 Score=40.94 Aligned_cols=81 Identities=22% Similarity=0.286 Sum_probs=49.1
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeCCCC
Q 012940 88 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRDP 167 (453)
Q Consensus 88 kVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~~dp 167 (453)
+|.|+|.|.||...++++.... .+|+++... .+.+..+.+ +| -+.+ + .++
T Consensus 179 ~VlV~GaG~vG~~a~qla~~~G---a~Vi~~~~~--~~~~~~~~~----lG----------a~~v---------~--~~~ 228 (348)
T 3two_A 179 KVGVAGFGGLGSMAVKYAVAMG---AEVSVFARN--EHKKQDALS----MG----------VKHF---------Y--TDP 228 (348)
T ss_dssp EEEEESCSHHHHHHHHHHHHTT---CEEEEECSS--STTHHHHHH----TT----------CSEE---------E--SSG
T ss_pred EEEEECCcHHHHHHHHHHHHCC---CeEEEEeCC--HHHHHHHHh----cC----------CCee---------c--CCH
Confidence 7999999999999999887653 588777532 222322222 11 0111 1 122
Q ss_pred CCCCccccCccEEEcCCCCCCChhhHHHHHHcCC
Q 012940 168 LQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGA 201 (453)
Q Consensus 168 ~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGA 201 (453)
+.+ .+ ++|+||||+|.....+.+-..++.|.
T Consensus 229 ~~~--~~-~~D~vid~~g~~~~~~~~~~~l~~~G 259 (348)
T 3two_A 229 KQC--KE-ELDFIISTIPTHYDLKDYLKLLTYNG 259 (348)
T ss_dssp GGC--CS-CEEEEEECCCSCCCHHHHHTTEEEEE
T ss_pred HHH--hc-CCCEEEECCCcHHHHHHHHHHHhcCC
Confidence 222 22 89999999997756566555555554
No 216
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=80.82 E-value=1.1 Score=43.32 Aligned_cols=32 Identities=22% Similarity=0.253 Sum_probs=26.2
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
++||||+|+|.+|+.+.+.|.+.. .+|+..+.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G---~~V~~~dr 46 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWP---GGVTVYDI 46 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTST---TCEEEECS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCC---CeEEEEeC
Confidence 569999999999999999987653 57776753
No 217
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=80.43 E-value=3.1 Score=40.91 Aligned_cols=22 Identities=23% Similarity=0.274 Sum_probs=18.9
Q ss_pred eeEEEEcCChhHHHHHHHHHhC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGR 108 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r 108 (453)
|||+|.|.|.||..+.-.|..+
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~ 22 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLN 22 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhC
Confidence 5999999999999998776654
No 218
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=80.34 E-value=1.5 Score=42.42 Aligned_cols=32 Identities=28% Similarity=0.367 Sum_probs=26.4
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
..+|+|.|+|+||+.+++.|.... ++|++.+.
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~G---~~V~~~d~ 188 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAALG---ANVKVGAR 188 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CCEEEEEcccHHHHHHHHHHHHCC---CEEEEEEC
Confidence 358999999999999999988653 58777764
No 219
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=79.83 E-value=1.6 Score=41.57 Aligned_cols=31 Identities=16% Similarity=0.342 Sum_probs=25.3
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
++||+|.|+|.+|+.+++.|.... .+|+.++
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g---~~V~~~~ 34 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEG---VTVYAFD 34 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTT---CEEEEEC
T ss_pred CCEEEEECccHHHHHHHHHHHHCC---CeEEEEe
Confidence 469999999999999999988653 5776554
No 220
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=79.80 E-value=1.2 Score=42.49 Aligned_cols=39 Identities=21% Similarity=0.304 Sum_probs=26.4
Q ss_pred cccceeeEEEEcCChhHHHHHHHHHhCC-CC-C-ceEEEEcC
Q 012940 82 ETVAKLKVAINGFGRIGRNFLRCWHGRK-DS-P-LDVVVVND 120 (453)
Q Consensus 82 ~~~m~ikVaInGfGrIGR~vlr~l~~r~-~~-~-ieiVaInd 120 (453)
...|+|||+|.|.|.+|..+...|.... .+ . .+|+.++.
T Consensus 4 m~~~~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 4 MNQQPIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp ---CCEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCCCCCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 3455689999999999999998887530 00 2 47776754
No 221
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=79.79 E-value=1.3 Score=45.41 Aligned_cols=36 Identities=28% Similarity=0.468 Sum_probs=29.2
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhh
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNA 127 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~ 127 (453)
.+|.|.|+||+|+.+.+.|.++. +++++|.. +++.+
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g---~~vvvId~--d~~~v 40 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSG---VKMVVLDH--DPDHI 40 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT---CCEEEEEC--CHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCC---CCEEEEEC--CHHHH
Confidence 48999999999999999998764 68888864 45544
No 222
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=79.59 E-value=1.5 Score=41.61 Aligned_cols=33 Identities=21% Similarity=0.285 Sum_probs=25.5
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
++||+|+|+|.+|+.+.+.|.... ...+|++.+
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g-~~~~V~~~d 38 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDH-PHYKIVGYN 38 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC-TTSEEEEEC
T ss_pred cceEEEEeeCHHHHHHHHHHHhCC-CCcEEEEEc
Confidence 469999999999999999887642 135766664
No 223
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=79.48 E-value=3.1 Score=43.12 Aligned_cols=32 Identities=31% Similarity=0.388 Sum_probs=28.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~ 121 (453)
.+|+|-|||-+|+.+++.|.+.. ..||+|.|.
T Consensus 211 k~vaVqG~GnVG~~aa~~L~e~G---akVVavsD~ 242 (421)
T 1v9l_A 211 KTVAIQGMGNVGRWTAYWLEKMG---AKVIAVSDI 242 (421)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT---CEEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHCC---CEEEEEECC
Confidence 58999999999999999998763 799999986
No 224
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=79.42 E-value=1.8 Score=45.10 Aligned_cols=90 Identities=20% Similarity=0.161 Sum_probs=51.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeCCC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNRD 166 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~~d 166 (453)
.||.|.|.|.|||.+++.|.++ +..+|+.++.. .+.+..+.+. .+ +. .+.+ ...+
T Consensus 24 k~VlIiGAGgiG~aia~~L~~~--~g~~V~v~~R~--~~ka~~la~~---~~-----~~------------~~~~-D~~d 78 (467)
T 2axq_A 24 KNVLLLGSGFVAQPVIDTLAAN--DDINVTVACRT--LANAQALAKP---SG-----SK------------AISL-DVTD 78 (467)
T ss_dssp EEEEEECCSTTHHHHHHHHHTS--TTEEEEEEESS--HHHHHHHHGG---GT-----CE------------EEEC-CTTC
T ss_pred CEEEEECChHHHHHHHHHHHhC--CCCeEEEEECC--HHHHHHHHHh---cC-----Cc------------EEEE-ecCC
Confidence 5899999999999999999865 23677666642 3322222210 00 00 0111 0011
Q ss_pred CCCCCccccCccEEEcCCCCCCChhhHHHHHHcCC
Q 012940 167 PLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGA 201 (453)
Q Consensus 167 p~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGA 201 (453)
++++.-.-.++|+||.|+|.+.....+...+++|.
T Consensus 79 ~~~l~~~l~~~DvVIn~tp~~~~~~v~~a~l~~g~ 113 (467)
T 2axq_A 79 DSALDKVLADNDVVISLIPYTFHPNVVKSAIRTKT 113 (467)
T ss_dssp HHHHHHHHHTSSEEEECSCGGGHHHHHHHHHHHTC
T ss_pred HHHHHHHHcCCCEEEECCchhhhHHHHHHHHhcCC
Confidence 11110000268999999998765555666778886
No 225
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=79.13 E-value=1.2 Score=44.71 Aligned_cols=88 Identities=20% Similarity=0.189 Sum_probs=51.8
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeCC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~~ 165 (453)
..||+|.|.|.+|+.+++.|.+. .+|+..+. +.+.+..+.+ . . ..+.+ ...
T Consensus 16 ~~~v~IiGaG~iG~~ia~~L~~~----~~V~V~~R--~~~~a~~la~--~-~-------------------~~~~~-d~~ 66 (365)
T 2z2v_A 16 HMKVLILGAGNIGRAIAWDLKDE----FDVYIGDV--NNENLEKVKE--F-A-------------------TPLKV-DAS 66 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTT----SEEEEEES--CHHHHHHHTT--T-S-------------------EEEEC-CTT
T ss_pred CCeEEEEcCCHHHHHHHHHHHcC----CeEEEEEC--CHHHHHHHHh--h-C-------------------CeEEE-ecC
Confidence 35999999999999999998754 46655543 3443323221 0 0 00111 001
Q ss_pred CCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCC
Q 012940 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAK 202 (453)
Q Consensus 166 dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAk 202 (453)
+.+++.=--.++|+||.|++.....+-+...+++|+.
T Consensus 67 ~~~~l~~ll~~~DvVIn~~P~~~~~~v~~a~l~~G~~ 103 (365)
T 2z2v_A 67 NFDKLVEVMKEFELVIGALPGFLGFKSIKAAIKSKVD 103 (365)
T ss_dssp CHHHHHHHHTTCSCEEECCCHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHhCCCEEEECCChhhhHHHHHHHHHhCCe
Confidence 1111100002689999999877666777788999973
No 226
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=78.86 E-value=0.8 Score=43.73 Aligned_cols=32 Identities=22% Similarity=0.157 Sum_probs=27.0
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
.|||+|+|.|.||..+.+.|.... .+|++++.
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G---~~V~~~~~ 37 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVG---HYVTVLHA 37 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTT---CEEEECSS
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCC---CEEEEecC
Confidence 469999999999999999998753 68877765
No 227
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=78.58 E-value=2.8 Score=40.12 Aligned_cols=32 Identities=19% Similarity=0.285 Sum_probs=25.3
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
++||.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 19 ~~~vlVtGatG~iG~~l~~~L~~~G---~~V~~~~r 51 (347)
T 4id9_A 19 SHMILVTGSAGRVGRAVVAALRTQG---RTVRGFDL 51 (347)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTT---CCEEEEES
T ss_pred CCEEEEECCCChHHHHHHHHHHhCC---CEEEEEeC
Confidence 45899999 8999999999998864 57777753
No 228
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=78.13 E-value=1.6 Score=45.32 Aligned_cols=40 Identities=23% Similarity=0.415 Sum_probs=30.6
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhh
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHL 130 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~L 130 (453)
.|||-|.|+|++|+.+++.|.+.. .+|+.|.. +++.+..|
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~---~~v~vId~--d~~~~~~~ 42 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGEN---NDITIVDK--DGDRLREL 42 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTT---EEEEEEES--CHHHHHHH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCC---CCEEEEEC--CHHHHHHH
Confidence 379999999999999999987543 58888864 45554443
No 229
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=78.01 E-value=2 Score=40.39 Aligned_cols=30 Identities=23% Similarity=0.387 Sum_probs=25.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
|||+|+|+|.+|+.+.+.|.... .+|++++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g---~~V~~~~ 30 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRG---HYLIGVS 30 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEEcCcHHHHHHHHHHHHCC---CEEEEEE
Confidence 48999999999999999988653 4777764
No 230
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=77.78 E-value=1.9 Score=42.03 Aligned_cols=32 Identities=22% Similarity=0.229 Sum_probs=26.4
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
.+||||+|+|.+|+.+.+.|.... .+|+..+.
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G---~~V~~~dr 62 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAG---YALQVWNR 62 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTT---CEEEEECS
T ss_pred CCEEEEECccHHHHHHHHHHHhCC---CeEEEEcC
Confidence 369999999999999999998753 57777653
No 231
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=77.68 E-value=1.9 Score=44.67 Aligned_cols=33 Identities=21% Similarity=0.422 Sum_probs=27.0
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 85 m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
|+|||+|.|.|.+|..+...|.+.. .+|++++-
T Consensus 1 M~mkI~VIG~G~vG~~lA~~La~~G---~~V~~~D~ 33 (450)
T 3gg2_A 1 MSLDIAVVGIGYVGLVSATCFAELG---ANVRCIDT 33 (450)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhcC---CEEEEEEC
Confidence 5579999999999999999998763 58877753
No 232
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=77.67 E-value=2.1 Score=40.78 Aligned_cols=31 Identities=19% Similarity=0.260 Sum_probs=25.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
+||+|+|+|.+|+.+.+.|.... .+|+..+.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G---~~V~~~dr 32 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAG---CSVTIWNR 32 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CEEEEEeecHHHHHHHHHHHHCC---CeEEEEcC
Confidence 58999999999999999998763 57776653
No 233
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=77.66 E-value=2 Score=41.15 Aligned_cols=31 Identities=16% Similarity=0.183 Sum_probs=26.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
+||+|+|+|.+|+.+.+.|.... .+|+.++.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G---~~V~~~d~ 34 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAG---YLLNVFDL 34 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT---CEEEEECS
T ss_pred CEEEEEeecHHHHHHHHHHHhCC---CeEEEEcC
Confidence 59999999999999999998763 57777753
No 234
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=77.64 E-value=2.1 Score=40.00 Aligned_cols=32 Identities=22% Similarity=0.372 Sum_probs=26.4
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
.+||||+|+|.+|+.+.+.|.... .+|+..+.
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G---~~V~~~~r 50 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLG---HEVTIGTR 50 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 469999999999999999998753 57766653
No 235
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=77.56 E-value=1.8 Score=41.96 Aligned_cols=32 Identities=19% Similarity=0.344 Sum_probs=26.4
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
.+||||+|+|.+|+.+.+.|.... .+|++.+.
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G---~~V~~~dr 40 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQG---KRVAIWNR 40 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 469999999999999999998753 57776653
No 236
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=77.49 E-value=2.5 Score=41.82 Aligned_cols=30 Identities=20% Similarity=0.355 Sum_probs=24.5
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 88 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 88 kVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
+|.|.|.|.||..+++++..+. .+|+++..
T Consensus 190 ~VlV~GaG~vG~~~~q~a~~~G---a~Vi~~~~ 219 (366)
T 1yqd_A 190 HIGIVGLGGLGHVAVKFAKAFG---SKVTVIST 219 (366)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 7999999999999999887653 47777753
No 237
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=77.44 E-value=2 Score=40.26 Aligned_cols=32 Identities=16% Similarity=0.315 Sum_probs=24.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~ 121 (453)
|||+|+|+|++|+.+++.|.... .++|.+-+.
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g---~~~v~~~~~ 42 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKG---FRIVQVYSR 42 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHT---CCEEEEECS
T ss_pred CeEEEEcCCHHHHHHHHHHHHCC---CeEEEEEeC
Confidence 58999999999999999987653 464445444
No 238
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=77.03 E-value=2.1 Score=41.43 Aligned_cols=31 Identities=23% Similarity=0.344 Sum_probs=26.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
+||||+|+|.+|+.+.+.|.+.. .+|+..+.
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G---~~V~~~dr 52 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNG---FKVTVWNR 52 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CEEEEECccHHHHHHHHHHHHCC---CeEEEEeC
Confidence 59999999999999999998763 57777654
No 239
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=76.99 E-value=9.2 Score=37.34 Aligned_cols=90 Identities=17% Similarity=0.074 Sum_probs=55.7
Q ss_pred eeEEEEcCChhHHH-HHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeCC
Q 012940 87 LKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (453)
Q Consensus 87 ikVaInGfGrIGR~-vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~~ 165 (453)
.||.++|.|.+|.. +.+.|.++. .+|.+......+.....|-+ . | +.+....
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G---~~V~~~D~~~~~~~~~~L~~---------------~-------g--i~v~~g~ 57 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAG---FEVSGCDAKMYPPMSTQLEA---------------L-------G--IDVYEGF 57 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTT---CEEEEEESSCCTTHHHHHHH---------------T-------T--CEEEESC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCC---CEEEEEcCCCCcHHHHHHHh---------------C-------C--CEEECCC
Confidence 48999999999996 788888774 46544432211222212111 1 1 1222234
Q ss_pred CCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEe
Q 012940 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIIT 207 (453)
Q Consensus 166 dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIIS 207 (453)
+++++.+ .+.|+||-+.|.-.+.+....+.+.|.+ |++
T Consensus 58 ~~~~l~~--~~~d~vV~Spgi~~~~p~~~~a~~~gi~--v~~ 95 (326)
T 3eag_A 58 DAAQLDE--FKADVYVIGNVAKRGMDVVEAILNLGLP--YIS 95 (326)
T ss_dssp CGGGGGS--CCCSEEEECTTCCTTCHHHHHHHHTTCC--EEE
T ss_pred CHHHcCC--CCCCEEEECCCcCCCCHHHHHHHHcCCc--EEe
Confidence 4554431 2589999999998888888888889983 554
No 240
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=76.92 E-value=3.6 Score=41.67 Aligned_cols=31 Identities=23% Similarity=0.481 Sum_probs=26.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~ 121 (453)
.+|+|.|+|.||+.+++.|.+.. .+|+ +.|+
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~G---akVv-v~D~ 204 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTEG---AKLV-VTDV 204 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEE-EECS
T ss_pred CEEEEECchHHHHHHHHHHHHCC---CEEE-EEcC
Confidence 47999999999999999998764 6877 6665
No 241
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=76.91 E-value=5.7 Score=38.57 Aligned_cols=30 Identities=27% Similarity=0.398 Sum_probs=24.2
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEE
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVV 118 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaI 118 (453)
++||+|.|.|.+|..+...|.... .+|..+
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G---~~V~l~ 48 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAG---HEVILI 48 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTT---CEEEEE
T ss_pred CCcEEEECcCHHHHHHHHHHHHCC---CeEEEE
Confidence 579999999999999999988653 466666
No 242
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=76.89 E-value=3 Score=43.29 Aligned_cols=96 Identities=18% Similarity=0.301 Sum_probs=56.4
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCC----hh--hhhhhhccccceeecCceEEEecCCeEEECCeEE
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGG----VK--NASHLLKYDSLLGTFKADVKIVDNETISVDGKLI 159 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~----~~--~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I 159 (453)
..||+|-|||.+|+.+++.|.+.. ..||+|.|..+ ++ ....|+++-..+|++.+ +..+.+
T Consensus 221 g~~vaVqG~GnVG~~aa~~l~e~G---akVVavsD~~G~iyd~~GlD~~~l~~~~~~~g~i~~-----------~~a~~~ 286 (424)
T 3k92_A 221 NARIIIQGFGNAGSFLAKFMHDAG---AKVIGISDANGGLYNPDGLDIPYLLDKRDSFGMVTN-----------LFTDVI 286 (424)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHT---CEEEEEECSSCEEECTTCCCHHHHHHHCCSSSCCGG-----------GCSCCB
T ss_pred cCEEEEECCCHHHHHHHHHHHHCC---CEEEEEECCCCcEECCCCCCHHHHHHHHHHhCCCCC-----------CCcEEe
Confidence 468999999999999999998753 68999998621 11 01123322222332211 001111
Q ss_pred EEEeCCCCCCCCccccCccEEEcCC-CCCCChhhHHHHHHcCCCEEEEe
Q 012940 160 KVVSNRDPLQLPWAELGIDIVIEGT-GVFVDGPGAGKHIQAGAKKVIIT 207 (453)
Q Consensus 160 ~v~~~~dp~~l~W~~~gvDiVie~T-G~f~s~e~a~~hl~aGAkkVIIS 207 (453)
++++ .|. ..+||.+-|+ +..++.+.+... +|| +|+-
T Consensus 287 ------~~~~-i~~-~~~DIliPcA~~n~I~~~~a~~l---~ak-~V~E 323 (424)
T 3k92_A 287 ------TNEE-LLE-KDCDILVPAAISNQITAKNAHNI---QAS-IVVE 323 (424)
T ss_dssp ------CHHH-HHH-SCCSEEEECSCSSCBCTTTGGGC---CCS-EEEC
T ss_pred ------cCcc-cee-ccccEEeecCcccccChhhHhhc---Cce-EEEc
Confidence 1122 264 5799999988 666777776653 674 4553
No 243
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=76.81 E-value=2.3 Score=40.13 Aligned_cols=32 Identities=19% Similarity=0.203 Sum_probs=24.9
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
+||+|+|+|.+|+.+.+.|..... ..+|++++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~-~~~V~~~d 33 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGF-KGKIYGYD 33 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTC-CSEEEEEC
T ss_pred cEEEEEecCHHHHHHHHHHHhcCC-CcEEEEEe
Confidence 489999999999999999886531 23776664
No 244
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=76.72 E-value=2 Score=45.31 Aligned_cols=32 Identities=25% Similarity=0.265 Sum_probs=26.6
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
..+|||+|+|+||+.+.+.|... .++|++.+.
T Consensus 142 g~~vgIIG~G~IG~~vA~~l~~~---G~~V~~~d~ 173 (529)
T 1ygy_A 142 GKTVGVVGLGRIGQLVAQRIAAF---GAYVVAYDP 173 (529)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT---TCEEEEECT
T ss_pred CCEEEEEeeCHHHHHHHHHHHhC---CCEEEEECC
Confidence 35899999999999999998764 368888764
No 245
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=76.61 E-value=1.1 Score=41.54 Aligned_cols=32 Identities=19% Similarity=0.364 Sum_probs=25.1
Q ss_pred eEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 88 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 88 kVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
||.|.| .|.||+.+++.|.++. +..+|+++..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~-~g~~V~~~~r 33 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTV-PASQIVAIVR 33 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTS-CGGGEEEEES
T ss_pred CEEEEcCCchHHHHHHHHHHhhC-CCceEEEEEc
Confidence 588999 8999999999998651 2368877764
No 246
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=76.21 E-value=2.5 Score=38.60 Aligned_cols=30 Identities=17% Similarity=0.259 Sum_probs=23.5
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEE
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVV 118 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaI 118 (453)
++||+|+|.|.+|..+.+.|.... .+|+.+
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g---~~V~~~ 48 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAG---HEVTYY 48 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTT---CEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC---CEEEEE
Confidence 469999999999999999987653 465444
No 247
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=75.75 E-value=2.5 Score=40.72 Aligned_cols=32 Identities=22% Similarity=0.268 Sum_probs=25.5
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
++||+|+|+|.+|+.+++.|.... .+|+.++.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g---~~V~~~~~ 61 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMG---HTVTVWNR 61 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred CCeEEEEcccHHHHHHHHHHHhCC---CEEEEEeC
Confidence 368999999999999999988653 57666653
No 248
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=75.72 E-value=2.7 Score=37.48 Aligned_cols=31 Identities=29% Similarity=0.414 Sum_probs=26.3
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
|||.|.| +|.||+.+++.|.++. .+|+++..
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g---~~V~~~~R 32 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRG---HEVLAVVR 32 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCC---CEEEEEEe
Confidence 4799999 8999999999998864 58877764
No 249
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=75.47 E-value=2.8 Score=37.65 Aligned_cols=31 Identities=23% Similarity=0.360 Sum_probs=25.6
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
|||+|.| .|.+|+.+++.|.+.. .+|+.++.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g---~~V~~~~r 32 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLG---HEIVVGSR 32 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT---CEEEEEES
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 4899999 9999999999998653 57777754
No 250
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=75.35 E-value=2.1 Score=40.22 Aligned_cols=30 Identities=27% Similarity=0.347 Sum_probs=24.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
+||+|.|+|.+|+.+.+.|.. . .+|+.++.
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g---~~V~~~~~ 31 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-R---FPTLVWNR 31 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-T---SCEEEECS
T ss_pred CeEEEEcccHHHHHHHHHHhC-C---CeEEEEeC
Confidence 589999999999999998875 4 57666653
No 251
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=75.19 E-value=0.86 Score=43.47 Aligned_cols=23 Identities=30% Similarity=0.566 Sum_probs=17.8
Q ss_pred ceeeEEEEcCChhHHHHHHHHHh
Q 012940 85 AKLKVAINGFGRIGRNFLRCWHG 107 (453)
Q Consensus 85 m~ikVaInGfGrIGR~vlr~l~~ 107 (453)
|+|||||+|.|++|+.+++.|..
T Consensus 1 M~m~I~iIG~G~mG~~la~~l~~ 23 (276)
T 2i76_A 1 MSLVLNFVGTGTLTRFFLECLKD 23 (276)
T ss_dssp ---CCEEESCCHHHHHHHHTTC-
T ss_pred CCceEEEEeCCHHHHHHHHHHHH
Confidence 45799999999999999988754
No 252
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=75.11 E-value=2.2 Score=40.38 Aligned_cols=31 Identities=13% Similarity=0.340 Sum_probs=25.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
|||+|+|+|.+|+.+.+.|.... .+|+.++.
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g---~~V~~~~~ 31 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKHG---YPLIIYDV 31 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHTT---CCEEEECS
T ss_pred CeEEEEeccHHHHHHHHHHHHCC---CEEEEEeC
Confidence 48999999999999999988653 57666653
No 253
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=75.09 E-value=11 Score=39.99 Aligned_cols=33 Identities=24% Similarity=0.476 Sum_probs=28.4
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~ 121 (453)
..+|+|-|||.||+.+++.|.+.. -.||+|.|.
T Consensus 244 g~tVaVQG~GNVG~~aa~~L~e~G---akVVavsDs 276 (501)
T 3mw9_A 244 DKTFVVQGFGNVGLHSMRYLHRFG---AKCITVGES 276 (501)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT---CEEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC---CEEEEEEcC
Confidence 358999999999999999998763 689999874
No 254
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=74.96 E-value=4.6 Score=36.51 Aligned_cols=32 Identities=25% Similarity=0.310 Sum_probs=25.2
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCc-eEEEEcC
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPL-DVVVVND 120 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~i-eiVaInd 120 (453)
++|.|.| .|.||+.+++.|.++. .+ +|+++..
T Consensus 19 ~~vlVtGasg~iG~~l~~~L~~~G--~~~~V~~~~r 52 (242)
T 2bka_A 19 KSVFILGASGETGRVLLKEILEQG--LFSKVTLIGR 52 (242)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHHT--CCSEEEEEES
T ss_pred CeEEEECCCcHHHHHHHHHHHcCC--CCCEEEEEEc
Confidence 5799999 8999999999998763 12 7776653
No 255
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=74.80 E-value=2.5 Score=44.70 Aligned_cols=32 Identities=19% Similarity=0.329 Sum_probs=26.2
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
..+|+|.|+|+||+.+++.+.... ++|++.+.
T Consensus 277 GktVgIIG~G~IG~~vA~~l~~~G---~~V~v~d~ 308 (494)
T 3d64_A 277 GKIAVVAGYGDVGKGCAQSLRGLG---ATVWVTEI 308 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTT---CEEEEECS
T ss_pred CCEEEEEccCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 358999999999999999987653 68777753
No 256
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=74.77 E-value=2.7 Score=40.74 Aligned_cols=32 Identities=19% Similarity=0.187 Sum_probs=25.8
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
++||+|+|.|.+|..+.+.|.... .+|+.++.
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g---~~V~~~~r 35 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKG---QSVLAWDI 35 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred cCeEEEECCCHHHHHHHHHHHhCC---CEEEEEeC
Confidence 369999999999999999887653 57766653
No 257
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=74.66 E-value=2.6 Score=42.28 Aligned_cols=32 Identities=22% Similarity=0.476 Sum_probs=26.8
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
++||||+|+|.+|+.+.+.|.+.. .+|++.+.
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G---~~V~v~dr 53 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGG---HECVVYDL 53 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CCEEEEECchHHHHHHHHHHHhCC---CEEEEEeC
Confidence 379999999999999999998764 58777764
No 258
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=74.49 E-value=2.5 Score=39.38 Aligned_cols=29 Identities=28% Similarity=0.548 Sum_probs=23.9
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEE
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVV 118 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaI 118 (453)
|||+|+|+|.+|..+.+.|.... .+|+..
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~g---~~V~~~ 29 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSRG---VEVVTS 29 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT---CEEEEC
T ss_pred CeEEEEechHHHHHHHHHHHHCC---CeEEEe
Confidence 48999999999999999998653 576654
No 259
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=73.70 E-value=3.1 Score=40.44 Aligned_cols=33 Identities=24% Similarity=0.239 Sum_probs=25.5
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 85 m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
|++||+|.|.|.+|..+...|.... .+|..+..
T Consensus 1 M~mkI~IiGaGaiG~~~a~~L~~~g---~~V~~~~r 33 (320)
T 3i83_A 1 MSLNILVIGTGAIGSFYGALLAKTG---HCVSVVSR 33 (320)
T ss_dssp --CEEEEESCCHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCC---CeEEEEeC
Confidence 6689999999999999999887653 47766654
No 260
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=73.58 E-value=3.1 Score=39.15 Aligned_cols=31 Identities=26% Similarity=0.478 Sum_probs=26.6
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
|||.|-| +|-||+.+++.|.++. .+|+++..
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G---~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARG---HEVTLVSR 32 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC---CEEEEEEC
Confidence 5899999 8999999999998874 58888764
No 261
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=73.24 E-value=2.6 Score=41.50 Aligned_cols=33 Identities=21% Similarity=0.213 Sum_probs=25.9
Q ss_pred cee-eEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 85 AKL-KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 85 m~i-kVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
|+| ||+|+|.|.+|..+...|.... .+|..++.
T Consensus 13 m~M~kI~iIG~G~mG~~la~~L~~~G---~~V~~~~r 46 (366)
T 1evy_A 13 LYLNKAVVFGSGAFGTALAMVLSKKC---REVCVWHM 46 (366)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHTTTE---EEEEEECS
T ss_pred hccCeEEEECCCHHHHHHHHHHHhCC---CEEEEEEC
Confidence 445 9999999999999999887542 57766654
No 262
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=73.18 E-value=3.3 Score=39.92 Aligned_cols=32 Identities=22% Similarity=0.500 Sum_probs=25.3
Q ss_pred ceeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 85 m~ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
|..||+|+| +|.||..+.+.|.... .+|+.++
T Consensus 20 ~~~~I~iIGg~G~mG~~la~~l~~~G---~~V~~~~ 52 (298)
T 2pv7_A 20 DIHKIVIVGGYGKLGGLFARYLRASG---YPISILD 52 (298)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTTT---CCEEEEC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHhCC---CeEEEEE
Confidence 445899999 9999999999997653 4665554
No 263
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=72.34 E-value=2.9 Score=38.88 Aligned_cols=31 Identities=13% Similarity=0.158 Sum_probs=23.9
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
|||+|+|.|.+|+.+.+.|..... .+|..++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~--~~v~~~~ 31 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGG--YRIYIAN 31 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCS--CEEEEEC
T ss_pred CEEEEECchHHHHHHHHHHHHCCC--CeEEEEC
Confidence 489999999999999998876431 3665554
No 264
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=72.28 E-value=3.1 Score=39.95 Aligned_cols=34 Identities=21% Similarity=0.280 Sum_probs=25.4
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
++||+|+|.|.+|+.+++.|.....+.-+|+..+
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~d 36 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTN 36 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEEC
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEe
Confidence 4689999999999999999987532112655554
No 265
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=72.28 E-value=5 Score=41.41 Aligned_cols=31 Identities=23% Similarity=0.218 Sum_probs=24.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
.||.|.|.|.||+.+++.|.+.. .+|+.++.
T Consensus 4 k~VlViGaG~iG~~ia~~L~~~G---~~V~v~~R 34 (450)
T 1ff9_A 4 KSVLMLGSGFVTRPTLDVLTDSG---IKVTVACR 34 (450)
T ss_dssp CEEEEECCSTTHHHHHHHHHTTT---CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCc---CEEEEEEC
Confidence 47999999999999999998643 57665553
No 266
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=72.17 E-value=2.5 Score=44.46 Aligned_cols=32 Identities=22% Similarity=0.345 Sum_probs=26.2
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
..+|+|+|+|+||+.+++.+.... ++|++.+.
T Consensus 257 GktVgIIG~G~IG~~vA~~l~~~G---~~Viv~d~ 288 (479)
T 1v8b_A 257 GKIVVICGYGDVGKGCASSMKGLG---ARVYITEI 288 (479)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHT---CEEEEECS
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCc---CEEEEEeC
Confidence 358999999999999999987653 68877764
No 267
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=71.96 E-value=6.5 Score=38.81 Aligned_cols=22 Identities=27% Similarity=0.591 Sum_probs=19.5
Q ss_pred eeEEEEcCChhHHHHHHHHHhC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGR 108 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r 108 (453)
|||+|.|.|.||..++..+..+
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~ 22 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQ 22 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC
Confidence 5899999999999999888765
No 268
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=71.83 E-value=3 Score=40.58 Aligned_cols=34 Identities=24% Similarity=0.329 Sum_probs=26.3
Q ss_pred cceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 84 VAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 84 ~m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
.|.-|||++|+|..|..+.+.|.+.. ++|++-|.
T Consensus 3 ~Ms~kIgfIGLG~MG~~mA~~L~~~G---~~V~v~dr 36 (297)
T 4gbj_A 3 AMSEKIAFLGLGNLGTPIAEILLEAG---YELVVWNR 36 (297)
T ss_dssp -CCCEEEEECCSTTHHHHHHHHHHTT---CEEEEC--
T ss_pred CCCCcEEEEecHHHHHHHHHHHHHCC---CeEEEEeC
Confidence 46569999999999999999998764 68776664
No 269
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=71.80 E-value=3.1 Score=41.61 Aligned_cols=31 Identities=35% Similarity=0.434 Sum_probs=26.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
.||+|+|+|.||..+.+.|.... .+|++.+.
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G---~~V~~~dr 39 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAAN---HSVFGYNR 39 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred CEEEEEeecHHHHHHHHHHHHCC---CEEEEEeC
Confidence 58999999999999999998753 57777763
No 270
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=71.77 E-value=2.4 Score=40.35 Aligned_cols=31 Identities=23% Similarity=0.251 Sum_probs=25.3
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
+||+|.|+|.+|+.+.+.|.+.. .+|+..+.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G---~~V~~~dr 32 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAG---FDVTVWNR 32 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHT---CCEEEECS
T ss_pred CeEEEEccCHHHHHHHHHHHHCC---CeEEEEcC
Confidence 48999999999999999988653 57766653
No 271
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=71.72 E-value=3.3 Score=43.47 Aligned_cols=30 Identities=20% Similarity=0.379 Sum_probs=24.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
-+|+|.|||+||+.+++.+.... ++|++.+
T Consensus 248 KTVgVIG~G~IGr~vA~~lrafG---a~Viv~d 277 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAGAG---ARVKVTE 277 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHCC---CEEEEEe
Confidence 48999999999999999987653 6776664
No 272
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=71.65 E-value=3.7 Score=38.32 Aligned_cols=31 Identities=19% Similarity=0.305 Sum_probs=25.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
|||+|.|.|.+|..+...|.+.. .+|+.++.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g---~~V~~~~r 31 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQG---HEVQGWLR 31 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CeEEEECcCHHHHHHHHHHHhCC---CCEEEEEc
Confidence 48999999999999999988753 47777754
No 273
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=74.19 E-value=0.81 Score=42.06 Aligned_cols=32 Identities=22% Similarity=0.128 Sum_probs=24.0
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 85 m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
+.+||+|+|+|.+|+.+++.|.... .+|+.++
T Consensus 18 ~~~~I~iIG~G~mG~~la~~L~~~G---~~V~~~~ 49 (201)
T 2yjz_A 18 KQGVVCIFGTGDFGKSLGLKMLQCG---YSVVFGS 49 (201)
Confidence 4468999999999999999887542 3554443
No 274
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=71.32 E-value=3.4 Score=43.02 Aligned_cols=30 Identities=23% Similarity=0.450 Sum_probs=24.9
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
.+|+|+|+|+||+.+++.|.... ++|++.+
T Consensus 212 ktVgIiG~G~IG~~vA~~Lka~G---a~Viv~D 241 (436)
T 3h9u_A 212 KTACVCGYGDVGKGCAAALRGFG---ARVVVTE 241 (436)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEEeeCHHHHHHHHHHHHCC---CEEEEEC
Confidence 58999999999999999998653 6766654
No 275
>1q0q_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase; HET: DXP NDP; 1.90A {Escherichia coli} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1q0l_A* 1q0h_A* 3r0i_A* 1k5h_A 1onn_A 1ono_A 1onp_A* 1jvs_A* 1t1r_A* 1t1s_A* 2egh_A* 3anm_A* 3anl_A* 3ann_A* 3iie_A
Probab=71.27 E-value=4.5 Score=41.74 Aligned_cols=114 Identities=18% Similarity=0.213 Sum_probs=64.8
Q ss_pred cceeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhh-ccccceeecCceEEEecCC---eEE--E--
Q 012940 84 VAKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLL-KYDSLLGTFKADVKIVDNE---TIS--V-- 154 (453)
Q Consensus 84 ~m~ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~Ll-kyDS~~G~f~~~v~~~~~~---~l~--v-- 154 (453)
.|| ||.|.| +|-||.+.|+++.... +.|+|+++..-.+.+.++... +|...+ +.+.++. .|. +
T Consensus 8 ~~k-~i~ILGSTGSIGtqtLdVi~~~p-d~f~V~aL~ag~nv~~L~~q~~~f~p~~------v~v~d~~~~~~L~~~l~~ 79 (406)
T 1q0q_A 8 GMK-QLTILGSTGSIGCSTLDVVRHNP-EHFRVVALVAGKNVTRMVEQCLEFSPRY------AVMDDEASAKLLKTMLQQ 79 (406)
T ss_dssp -CE-EEEEETTTSHHHHHHHHHHHHCT-TTEEEEEEEESSCHHHHHHHHHHHCCSE------EEESSHHHHHHHHHHHHH
T ss_pred Cce-eEEEEccCcHHHHHHHHHHHhCC-CccEEEEEEcCCCHHHHHHHHHHhCCCE------EEEcCHHHHHHHHHHhhc
Confidence 344 899999 9999999999998753 359999997654565554443 222211 1110000 000 0
Q ss_pred CCeEEEEEeCCC-CCCC-CccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeC
Q 012940 155 DGKLIKVVSNRD-PLQL-PWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITA 208 (453)
Q Consensus 155 ~Gk~I~v~~~~d-p~~l-~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISa 208 (453)
.|..++++...+ ..++ .+ ..+|+|+-+.-.+....---.++++| |++.+.+
T Consensus 80 ~~~~~~v~~G~~~l~~~a~~--~~~D~Vv~AIvG~aGL~PTlaAi~aG-K~iaLAN 132 (406)
T 1q0q_A 80 QGSRTEVLSGQQAACDMAAL--EDVDQVMAAIVGAAGLLPTLAAIRAG-KTILLAN 132 (406)
T ss_dssp TTCCCEEEESHHHHHHHHTC--TTCCEEEECCSSGGGHHHHHHHHHTT-CEEEECC
T ss_pred CCCCcEEEeCHHHHHHHhcC--CCCCEEEEccccHhHHHHHHHHHHCC-CeEEEec
Confidence 121233332211 1111 11 15899999987777776666889999 5666643
No 276
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=70.69 E-value=3.9 Score=39.83 Aligned_cols=35 Identities=17% Similarity=0.285 Sum_probs=26.6
Q ss_pred ccceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 83 TVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 83 ~~m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
.-|.+||+|.|.|.+|..+.+.|.... .+|..++.
T Consensus 11 ~~~~~kI~iIG~G~mG~ala~~L~~~G---~~V~~~~r 45 (335)
T 1z82_A 11 HHMEMRFFVLGAGSWGTVFAQMLHENG---EEVILWAR 45 (335)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred cccCCcEEEECcCHHHHHHHHHHHhCC---CeEEEEeC
Confidence 467889999999999999999988653 47766664
No 277
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=70.34 E-value=4.6 Score=44.40 Aligned_cols=31 Identities=26% Similarity=0.222 Sum_probs=25.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
.||||+|.|.+|..+...+.... ++|+.++-
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG---~~V~l~D~ 343 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSN---YPVILKEV 343 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTT---CCEEEECS
T ss_pred cEEEEEcCCHhhHHHHHHHHhCC---CEEEEEEC
Confidence 48999999999999999988653 67776653
No 278
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=70.28 E-value=7.3 Score=39.10 Aligned_cols=27 Identities=26% Similarity=0.351 Sum_probs=19.1
Q ss_pred ccccc-eeeEEEEc-CChhHHHHHHHHHh
Q 012940 81 KETVA-KLKVAING-FGRIGRNFLRCWHG 107 (453)
Q Consensus 81 ~~~~m-~ikVaInG-fGrIGR~vlr~l~~ 107 (453)
+...| .+||+|.| .|.||..++-.|..
T Consensus 18 ~~~s~~~vKVaViGAaG~IG~~la~~la~ 46 (345)
T 4h7p_A 18 GPGSMSAVKVAVTGAAGQIGYALVPLIAR 46 (345)
T ss_dssp ----CCCEEEEEESTTSHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEECcCcHHHHHHHHHHHh
Confidence 33444 58999999 59999999876654
No 279
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=70.26 E-value=2 Score=44.54 Aligned_cols=92 Identities=22% Similarity=0.287 Sum_probs=53.0
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECC--eEEEEEeCC
Q 012940 88 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDG--KLIKVVSNR 165 (453)
Q Consensus 88 kVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~G--k~I~v~~~~ 165 (453)
||-|.|-|+||..+++.|+++ +++.-|.. +.+.+.+|-. .+ ++.+.++| ....++.+.
T Consensus 237 ~v~I~GgG~ig~~lA~~L~~~----~~v~iIE~--d~~r~~~la~------~l--------~~~~Vi~GD~td~~~L~ee 296 (461)
T 4g65_A 237 RIMIVGGGNIGASLAKRLEQT----YSVKLIER--NLQRAEKLSE------EL--------ENTIVFCGDAADQELLTEE 296 (461)
T ss_dssp EEEEECCSHHHHHHHHHHTTT----SEEEEEES--CHHHHHHHHH------HC--------TTSEEEESCTTCHHHHHHT
T ss_pred EEEEEcchHHHHHHHHHhhhc----CceEEEec--CHHHHHHHHH------HC--------CCceEEeccccchhhHhhc
Confidence 799999999999999998643 56666754 3333322221 00 13344443 122222222
Q ss_pred CCCCCCccccCccEEEcCCCCCCChh-hHHHHHHcCCCEEEE
Q 012940 166 DPLQLPWAELGIDIVIEGTGVFVDGP-GAGKHIQAGAKKVII 206 (453)
Q Consensus 166 dp~~l~W~~~gvDiVie~TG~f~s~e-~a~~hl~aGAkkVII 206 (453)
.+ ...|+++-+|+..-.-= .+..+.+.|++|+|.
T Consensus 297 ---~i----~~~D~~ia~T~~De~Ni~~~llAk~~gv~kvIa 331 (461)
T 4g65_A 297 ---NI----DQVDVFIALTNEDETNIMSAMLAKRMGAKKVMV 331 (461)
T ss_dssp ---TG----GGCSEEEECCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred ---Cc----hhhcEEEEcccCcHHHHHHHHHHHHcCCccccc
Confidence 22 25799999998753332 223455688888655
No 280
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=69.93 E-value=3.4 Score=39.94 Aligned_cols=33 Identities=24% Similarity=0.286 Sum_probs=24.3
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 85 m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
|++||+|.|.|.+|..+...|.... .+|..+..
T Consensus 1 M~mkI~IiGaGaiG~~~a~~L~~~g---~~V~~~~r 33 (312)
T 3hn2_A 1 MSLRIAIVGAGALGLYYGALLQRSG---EDVHFLLR 33 (312)
T ss_dssp ---CEEEECCSTTHHHHHHHHHHTS---CCEEEECS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCC---CeEEEEEc
Confidence 5689999999999999999887653 36666654
No 281
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=69.57 E-value=3.7 Score=40.51 Aligned_cols=31 Identities=32% Similarity=0.338 Sum_probs=25.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
+||+|+|+|.||+.+++.|.... ++|+..+.
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G---~~V~~~~~ 47 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSG---VDVTVGLR 47 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT---CCEEEECC
T ss_pred CEEEEECchHHHHHHHHHHHHCc---CEEEEEEC
Confidence 58999999999999999987653 57665554
No 282
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=69.17 E-value=3.4 Score=40.13 Aligned_cols=31 Identities=16% Similarity=0.293 Sum_probs=24.5
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEc
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~i-eiVaIn 119 (453)
++||||+|+|.+|..+.+.|.... . +|+..+
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G---~~~V~~~d 55 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAG---AIDMAAYD 55 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHS---CCEEEEEC
T ss_pred CCEEEEECccHHHHHHHHHHHHCC---CCeEEEEc
Confidence 369999999999999999998653 4 665554
No 283
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=68.51 E-value=8.1 Score=37.64 Aligned_cols=32 Identities=22% Similarity=0.400 Sum_probs=25.3
Q ss_pred eeEEEEc-CChhHHHHHHHHHhC-CCCCceEEEEcC
Q 012940 87 LKVAING-FGRIGRNFLRCWHGR-KDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r-~~~~ieiVaInd 120 (453)
.+|-|-| +|.||+.+++.|.++ .. -+|+++..
T Consensus 22 k~vlVTGatG~iG~~l~~~L~~~~g~--~~V~~~~r 55 (344)
T 2gn4_A 22 QTILITGGTGSFGKCFVRKVLDTTNA--KKIIVYSR 55 (344)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCC--SEEEEEES
T ss_pred CEEEEECCCcHHHHHHHHHHHhhCCC--CEEEEEEC
Confidence 5899999 999999999999875 31 27777654
No 284
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=68.43 E-value=3.7 Score=42.56 Aligned_cols=32 Identities=19% Similarity=0.340 Sum_probs=26.2
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
++||||+|+|.+|+.+++.|.+.. .+|+..|.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G---~~V~v~dr 36 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRG---YTVAIYNR 36 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCC---CEEEEEcC
Confidence 468999999999999999998753 57766654
No 285
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=68.42 E-value=4.9 Score=36.00 Aligned_cols=31 Identities=13% Similarity=0.244 Sum_probs=25.2
Q ss_pred ee-EEEEc-CChhHHHHHHHHH-hCCCCCceEEEEcC
Q 012940 87 LK-VAING-FGRIGRNFLRCWH-GRKDSPLDVVVVND 120 (453)
Q Consensus 87 ik-VaInG-fGrIGR~vlr~l~-~r~~~~ieiVaInd 120 (453)
+| |.|.| .|.||+.+++.|. ++. .+|+++..
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g---~~V~~~~r 38 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTD---MHITLYGR 38 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCC---CEEEEEES
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCC---ceEEEEec
Confidence 45 99999 8999999999998 553 58777754
No 286
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=68.14 E-value=4.5 Score=40.92 Aligned_cols=31 Identities=23% Similarity=0.422 Sum_probs=26.5
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~ 121 (453)
.+|+|.|||.||+.+++.|.+.. ..|+ +.|+
T Consensus 176 ktV~I~G~GnVG~~~A~~l~~~G---akVv-vsD~ 206 (355)
T 1c1d_A 176 LTVLVQGLGAVGGSLASLAAEAG---AQLL-VADT 206 (355)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEE-EECS
T ss_pred CEEEEECcCHHHHHHHHHHHHCC---CEEE-EEeC
Confidence 48999999999999999998763 6888 7775
No 287
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=68.13 E-value=4.4 Score=37.77 Aligned_cols=31 Identities=23% Similarity=0.354 Sum_probs=26.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
+||.|.|.|.||+.+++.|.++. .+|+++..
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g---~~V~~~~r 34 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQG---HEVTGLRR 34 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT---CCEEEEEC
T ss_pred CcEEEECCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 58999999999999999998764 57777754
No 288
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=67.76 E-value=3 Score=38.77 Aligned_cols=22 Identities=18% Similarity=0.441 Sum_probs=19.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGR 108 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r 108 (453)
+||+|+|.|.+|..+.+.|...
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~ 26 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANA 26 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHC
Confidence 6999999999999999988754
No 289
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=67.53 E-value=2.3 Score=36.07 Aligned_cols=31 Identities=16% Similarity=0.201 Sum_probs=23.7
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
..||+|.|.|.+|+.+++.|..+ .++|+.++
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~---g~~v~v~~ 51 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYP---QYKVTVAG 51 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTT---TCEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhC---CCEEEEEc
Confidence 35899999999999999988654 36744444
No 290
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=67.35 E-value=5 Score=37.58 Aligned_cols=33 Identities=30% Similarity=0.462 Sum_probs=27.0
Q ss_pred ceeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 85 m~ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
|++||.|.| +|.||+.+++.|.++. .+|+++..
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 39 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASG---EEVTVLDD 39 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT---CCEEEECC
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCC---CEEEEEec
Confidence 456999999 8999999999998864 57777754
No 291
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=67.18 E-value=5.2 Score=37.70 Aligned_cols=32 Identities=19% Similarity=0.336 Sum_probs=26.0
Q ss_pred ceeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 85 m~ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
|.+||.|.| .|.||+.+++.|.++. .+|+++.
T Consensus 1 m~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~ 33 (315)
T 2ydy_A 1 MNRRVLVTGATGLLGRAVHKEFQQNN---WHAVGCG 33 (315)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHTTT---CEEEEEC
T ss_pred CCCeEEEECCCcHHHHHHHHHHHhCC---CeEEEEc
Confidence 456899999 8999999999998763 5777775
No 292
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=67.01 E-value=4.2 Score=35.89 Aligned_cols=35 Identities=17% Similarity=0.220 Sum_probs=26.6
Q ss_pred ceeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 85 m~ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
|.+||.|.| +|.||+.+++.|.++.. ..+|+++..
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~-~~~V~~~~r 39 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPT-LAKVIAPAR 39 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTT-CCEEECCBS
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCC-CCeEEEEeC
Confidence 556899999 99999999999988631 126666543
No 293
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=66.99 E-value=6.6 Score=38.18 Aligned_cols=29 Identities=24% Similarity=0.261 Sum_probs=23.8
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEc
Q 012940 88 KVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (453)
Q Consensus 88 kVaInGfGrIGR~vlr~l~~r~~~~i-eiVaIn 119 (453)
+|.|+|.|.||..+++++..+. . +|+++.
T Consensus 167 ~VlV~GaG~vG~~~~q~a~~~G---a~~Vi~~~ 196 (343)
T 2dq4_A 167 SVLITGAGPIGLMAAMVVRASG---AGPILVSD 196 (343)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT---CCSEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC---CCEEEEEC
Confidence 7999999999999999887653 4 677765
No 294
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=66.86 E-value=8.9 Score=38.29 Aligned_cols=22 Identities=14% Similarity=0.070 Sum_probs=19.6
Q ss_pred eeEEEEcCChhHHHHHHHHHhC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGR 108 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r 108 (453)
+||+|.|.|.||..++..+..+
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~ 43 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMK 43 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC
Confidence 5999999999999999888765
No 295
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=65.91 E-value=5 Score=39.78 Aligned_cols=30 Identities=27% Similarity=0.386 Sum_probs=24.1
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 88 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 88 kVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
+|.|+|.|.||...++++..+. .+|+++..
T Consensus 197 ~VlV~GaG~vG~~aiqlak~~G---a~Vi~~~~ 226 (369)
T 1uuf_A 197 KVGVVGIGGLGHMGIKLAHAMG---AHVVAFTT 226 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 7999999999999999887653 47776653
No 296
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=65.90 E-value=3.2 Score=39.78 Aligned_cols=32 Identities=22% Similarity=0.261 Sum_probs=23.2
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 85 m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
|++||+|.|.|.+|..+...|.... .+|..+.
T Consensus 1 M~mkI~iiGaGa~G~~~a~~L~~~g---~~V~~~~ 32 (294)
T 3g17_A 1 MSLSVAIIGPGAVGTTIAYELQQSL---PHTTLIG 32 (294)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHHC---TTCEEEE
T ss_pred CCcEEEEECCCHHHHHHHHHHHHCC---CeEEEEE
Confidence 6689999999999999998887543 2444444
No 297
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=65.85 E-value=14 Score=34.89 Aligned_cols=31 Identities=19% Similarity=0.229 Sum_probs=24.5
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
.+|-|+|.|.+|..-++.|.+.. -+|+.|+.
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~G---A~VtVvap 62 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQEG---AAITVVAP 62 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGGC---CCEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEECC
Confidence 48999999999999999998753 35555654
No 298
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=65.56 E-value=5.3 Score=41.59 Aligned_cols=30 Identities=20% Similarity=0.353 Sum_probs=24.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
.+|+|.|+|.||+.+++.|.... ++|++.+
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~G---a~Viv~D 250 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAMG---SIVYVTE 250 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEEeeCHHHHHHHHHHHHCC---CEEEEEe
Confidence 48999999999999999997653 5766654
No 299
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=65.37 E-value=6.7 Score=36.96 Aligned_cols=31 Identities=29% Similarity=0.308 Sum_probs=25.2
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 86 ~ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
++||.|.| .|.||+.+++.|.++. .+|+++.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~~g---~~v~~~~ 34 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQRG---DVELVLR 34 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCT---TEEEECC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCC---CeEEEEe
Confidence 46899999 8999999999998753 4766654
No 300
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=64.89 E-value=17 Score=37.53 Aligned_cols=82 Identities=22% Similarity=0.182 Sum_probs=56.2
Q ss_pred eeEEEEcC----ChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEE
Q 012940 87 LKVAINGF----GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVV 162 (453)
Q Consensus 87 ikVaInGf----GrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~ 162 (453)
-+|+|+|. |++|+.+++.|.+.. .-.|..||-. ++. +.|. +++
T Consensus 9 ~siAVvGas~~~~~~g~~v~~~l~~~g--~~~v~pVnP~-----------~~~------------------i~G~--~~y 55 (457)
T 2csu_A 9 KGIAVIGASNDPKKLGYEVFKNLKEYK--KGKVYPVNIK-----------EEE------------------VQGV--KAY 55 (457)
T ss_dssp SEEEEETCCSCTTSHHHHHHHHHTTCC--SSEEEEECSS-----------CSE------------------ETTE--ECB
T ss_pred CeEEEECcCCCCCchHHHHHHHHHHcC--CCEEEEECCC-----------CCe------------------ECCE--ecc
Confidence 47999995 489999999987652 3577778731 011 2332 332
Q ss_pred eCCCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEE
Q 012940 163 SNRDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVII 206 (453)
Q Consensus 163 ~~~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVII 206 (453)
.+.++++- .+|+++-+++.....+......+.|+|.+|+
T Consensus 56 --~sl~~lp~---~~Dlavi~vp~~~~~~~v~e~~~~Gi~~vv~ 94 (457)
T 2csu_A 56 --KSVKDIPD---EIDLAIIVVPKRFVKDTLIQCGEKGVKGVVI 94 (457)
T ss_dssp --SSTTSCSS---CCSEEEECSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred --CCHHHcCC---CCCEEEEecCHHHHHHHHHHHHHcCCCEEEE
Confidence 34555652 6899998888777777777888899987654
No 301
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=64.64 E-value=5 Score=41.69 Aligned_cols=31 Identities=19% Similarity=0.357 Sum_probs=25.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
+||||+|+|.+|+.+.+.|.... .+|+..|.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G---~~V~v~dr 33 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHG---FVVCAFNR 33 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred CeEEEEChHHHHHHHHHHHHHCC---CeEEEEeC
Confidence 58999999999999999998753 57766664
No 302
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=64.53 E-value=4.9 Score=39.79 Aligned_cols=29 Identities=28% Similarity=0.179 Sum_probs=23.2
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEc
Q 012940 88 KVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (453)
Q Consensus 88 kVaInGfGrIGR~vlr~l~~r~~~~i-eiVaIn 119 (453)
+|.|+|.|.||...++++.... . .|+++.
T Consensus 185 ~VlV~GaG~vG~~aiqlak~~G---a~~Vi~~~ 214 (370)
T 4ej6_A 185 TVAILGGGVIGLLTVQLARLAG---ATTVILST 214 (370)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT---CSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC---CCEEEEEC
Confidence 7999999999999999887653 4 666664
No 303
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=64.49 E-value=5.2 Score=39.92 Aligned_cols=33 Identities=21% Similarity=0.240 Sum_probs=25.1
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 85 m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
|+|||+|.|.|.+|..+...|..+. ..+|+.+.
T Consensus 1 ~~mkI~ViGaG~~G~~~a~~La~~~--G~~V~~~~ 33 (404)
T 3c7a_A 1 MTVKVCVCGGGNGAHTLSGLAASRD--GVEVRVLT 33 (404)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTST--TEEEEEEC
T ss_pred CCceEEEECCCHHHHHHHHHHHhCC--CCEEEEEe
Confidence 4579999999999999999886531 25776665
No 304
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=64.22 E-value=4.9 Score=39.14 Aligned_cols=35 Identities=9% Similarity=0.211 Sum_probs=25.9
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCC-CCceEEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKD-SPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~-~~ieiVaInd 120 (453)
+|||+|+|.|.+|..+.+.|..... +..+|+..+.
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r 57 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSP 57 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECC
Confidence 3689999999999999999876531 1146666654
No 305
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=63.88 E-value=5.6 Score=38.16 Aligned_cols=30 Identities=23% Similarity=0.308 Sum_probs=24.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
-+|.|+|.|.||...++++.... .+|+++.
T Consensus 144 ~~VlV~GaG~vG~~a~qlak~~G---a~Vi~~~ 173 (315)
T 3goh_A 144 REVLIVGFGAVNNLLTQMLNNAG---YVVDLVS 173 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT---CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CEEEEEE
Confidence 37999999999999999886653 4888886
No 306
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=63.86 E-value=5.3 Score=38.33 Aligned_cols=31 Identities=19% Similarity=0.201 Sum_probs=25.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
|||+|.|.|.+|..+.+.|.... .+|+.++.
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g---~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNG---NEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHC---CEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCC---CeEEEEEc
Confidence 48999999999999999887643 47777754
No 307
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=63.63 E-value=4 Score=40.13 Aligned_cols=30 Identities=20% Similarity=0.289 Sum_probs=23.9
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 88 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 88 kVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
+|.|.|.|.||...++++.... .+|+++..
T Consensus 183 ~VlV~GaG~vG~~a~qlak~~G---a~Vi~~~~ 212 (357)
T 2cf5_A 183 RGGILGLGGVGHMGVKIAKAMG---HHVTVISS 212 (357)
T ss_dssp EEEEECCSHHHHHHHHHHHHHT---CEEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHHCC---CeEEEEeC
Confidence 7999999999999998876543 47777654
No 308
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=63.59 E-value=7.1 Score=37.35 Aligned_cols=31 Identities=23% Similarity=0.290 Sum_probs=25.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
.||+|+|.|.+|..+...|.... .+|+.++.
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G---~~V~~~d~ 46 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATG---HTVVLVDQ 46 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CeEEEEEC
Confidence 48999999999999999888653 58776653
No 309
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=63.48 E-value=6.1 Score=38.68 Aligned_cols=29 Identities=28% Similarity=0.360 Sum_probs=23.0
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCce-EEEEc
Q 012940 88 KVAINGFGRIGRNFLRCWHGRKDSPLD-VVVVN 119 (453)
Q Consensus 88 kVaInGfGrIGR~vlr~l~~r~~~~ie-iVaIn 119 (453)
+|.|+|.|.||...++++.... .+ |+++.
T Consensus 182 ~VlV~GaG~vG~~aiqlak~~G---a~~Vi~~~ 211 (363)
T 3m6i_A 182 PVLICGAGPIGLITMLCAKAAG---ACPLVITD 211 (363)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT---CCSEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHHcC---CCEEEEEC
Confidence 6999999999999999887653 34 66664
No 310
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=63.07 E-value=6.9 Score=33.52 Aligned_cols=33 Identities=18% Similarity=0.221 Sum_probs=26.7
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 85 m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
|.+.|+|+|-|..|-.++..|..+. ++|+.+..
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~~G---~~V~v~Ek 33 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTAAG---HQVHLFDK 33 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCC---CCEEEEEC
Confidence 6788999999999999998888763 67777764
No 311
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=63.04 E-value=5.3 Score=38.66 Aligned_cols=34 Identities=24% Similarity=0.226 Sum_probs=27.6
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcCC
Q 012940 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (453)
Q Consensus 86 ~ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd~ 121 (453)
++||.|.| +|.||+.+++.|.++ +..+|+++...
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~--~g~~V~~~~r~ 58 (372)
T 3slg_A 24 AKKVLILGVNGFIGHHLSKRILET--TDWEVFGMDMQ 58 (372)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHH--SSCEEEEEESC
T ss_pred CCEEEEECCCChHHHHHHHHHHhC--CCCEEEEEeCC
Confidence 46899999 999999999999876 13688888653
No 312
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=63.02 E-value=15 Score=36.62 Aligned_cols=29 Identities=24% Similarity=0.261 Sum_probs=23.6
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEc
Q 012940 88 KVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (453)
Q Consensus 88 kVaInGfGrIGR~vlr~l~~r~~~~i-eiVaIn 119 (453)
+|.|+|.|.||...++++.... . .|+++.
T Consensus 216 ~VlV~GaG~vG~~aiqlak~~G---a~~Vi~~~ 245 (404)
T 3ip1_A 216 NVVILGGGPIGLAAVAILKHAG---ASKVILSE 245 (404)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT---CSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC---CCEEEEEC
Confidence 7999999999999999887653 4 677764
No 313
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=62.95 E-value=5.6 Score=41.78 Aligned_cols=32 Identities=19% Similarity=0.362 Sum_probs=26.7
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
++||||+|+|.+|..+.+.|.+.. ++|++.|.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G---~~V~v~dr 35 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHG---FVVCAFNR 35 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred CCEEEEEChhHHHHHHHHHHHHCC---CEEEEEeC
Confidence 368999999999999999998764 57777764
No 314
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=62.95 E-value=6.6 Score=37.45 Aligned_cols=33 Identities=24% Similarity=0.240 Sum_probs=27.1
Q ss_pred ceeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 85 m~ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
|+++|-|.| .|.||+.+++.|.++. .+|+++..
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 34 (348)
T 1ek6_A 1 MAEKVLVTGGAGYIGSHTVLELLEAG---YLPVVIDN 34 (348)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTT---CCEEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC---CEEEEEec
Confidence 557899999 8999999999998763 57777743
No 315
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=62.93 E-value=6.6 Score=38.29 Aligned_cols=32 Identities=19% Similarity=0.225 Sum_probs=26.6
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 85 m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
|+ |||++|+|..|+.+.+.|.+.. .+|++-|.
T Consensus 3 M~-kIgfIGlG~MG~~mA~~L~~~G---~~v~v~dr 34 (300)
T 3obb_A 3 MK-QIAFIGLGHMGAPMATNLLKAG---YLLNVFDL 34 (300)
T ss_dssp CC-EEEEECCSTTHHHHHHHHHHTT---CEEEEECS
T ss_pred cC-EEEEeeehHHHHHHHHHHHhCC---CeEEEEcC
Confidence 53 8999999999999999998754 58777764
No 316
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=62.87 E-value=5.6 Score=41.34 Aligned_cols=31 Identities=26% Similarity=0.448 Sum_probs=25.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
|||||+|.|.+|+.+.+.|.+.. .+|+..+.
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G---~~V~v~dr 32 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKG---FKVAVFNR 32 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred CEEEEEChHHHHHHHHHHHHHCC---CEEEEEeC
Confidence 58999999999999999998764 57766664
No 317
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=62.75 E-value=7.5 Score=37.75 Aligned_cols=31 Identities=16% Similarity=0.262 Sum_probs=24.1
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 88 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 88 kVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
+|.|+|.|.||...++++.... ..+|+++..
T Consensus 174 ~vlv~GaG~vG~~a~qla~~~g--~~~Vi~~~~ 204 (345)
T 3jv7_A 174 TAVVIGVGGLGHVGIQILRAVS--AARVIAVDL 204 (345)
T ss_dssp EEEEECCSHHHHHHHHHHHHHC--CCEEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHHcC--CCEEEEEcC
Confidence 7999999999999998876541 257877753
No 318
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=62.64 E-value=6.7 Score=38.13 Aligned_cols=44 Identities=16% Similarity=0.234 Sum_probs=33.1
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhc
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLK 132 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~Llk 132 (453)
|||.|-| +|.||+.+++.|.++. .++|+++.-..+.+.+..+++
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g--~~~v~~~d~~~d~~~l~~~~~ 45 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTT--DHHIFEVHRQTKEEELESALL 45 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHC--CCEEEECCTTCCHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC--CCEEEEECCCCCHHHHHHHhc
Confidence 4899999 9999999999998763 257777654257776666663
No 319
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=62.08 E-value=7.6 Score=36.82 Aligned_cols=31 Identities=26% Similarity=0.426 Sum_probs=26.3
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
|||.|.| .|.||+.+++.|.++. .+|+++..
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r 45 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAG---HDLVLIHR 45 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC---CEEEEEec
Confidence 5999999 8999999999998764 58877754
No 320
>2y1e_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase, DOXP/MEP pathway; 1.65A {Mycobacterium tuberculosis} PDB: 2jcv_A* 2jcz_A* 2jd2_A 2jd1_A 2y1d_A* 2y1c_A 2y1f_A* 2y1g_A* 3ras_A* 4a03_A* 4aic_A* 2jcx_A* 2jcy_A 2jd0_A* 2c82_A
Probab=61.78 E-value=8.8 Score=39.46 Aligned_cols=110 Identities=14% Similarity=0.139 Sum_probs=62.4
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC-CCChhhhhhhh-ccccceeecCceEEEecCCeEEECCeEEEEEe
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND-SGGVKNASHLL-KYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd-~~~~~~~a~Ll-kyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~ 163 (453)
-||.|.| +|-||.+.|+++.... +.|+|+++.. -.+.+.++... +|...+ +.+.+++...-. .+++..
T Consensus 22 k~i~ILGSTGSIGtqtLdVi~~~p-d~f~V~aLaa~g~nv~~L~~q~~~f~p~~------v~v~d~~~~~~~--~~~v~~ 92 (398)
T 2y1e_A 22 LRVVVLGSTGSIGTQALQVIADNP-DRFEVVGLAAGGAHLDTLLRQRAQTGVTN------IAVADEHAAQRV--GDIPYH 92 (398)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHCT-TTEEEEEEEECSSCHHHHHHHHHHHCCCC------EEESCHHHHHHH--CCCSEE
T ss_pred eEEEEEccCcHHHHHHHHHHHhCC-CceEEEEEEecCCCHHHHHHHHHHcCCCE------EEEcCHHHhhhc--CCEEEe
Confidence 3799999 9999999999998753 3599999976 44666555443 222211 111000000000 012222
Q ss_pred CCC-CCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEe
Q 012940 164 NRD-PLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIIT 207 (453)
Q Consensus 164 ~~d-p~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIIS 207 (453)
..+ ..++- ....+|+|+-+.-.+....---.++++| |++.+.
T Consensus 93 G~~~l~~~a-~~~~~D~Vv~AIvG~aGL~PTlaAi~aG-K~iaLA 135 (398)
T 2y1e_A 93 GSDAATRLV-EQTEADVVLNALVGALGLRPTLAALKTG-ARLALA 135 (398)
T ss_dssp STTHHHHHH-HHSCCSEEEECCCSGGGHHHHHHHHHHT-CEEEEC
T ss_pred cHHHHHHHh-cCCCCCEEEEeCcCHHHHHHHHHHHHCC-CceEEc
Confidence 111 01110 0015899999987777776666889999 566554
No 321
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=61.59 E-value=9.4 Score=31.87 Aligned_cols=33 Identities=21% Similarity=0.253 Sum_probs=27.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~ 121 (453)
.||.|+|.|..|+.+++.+... +.++++++=|.
T Consensus 5 ~~vlIiGaG~~g~~l~~~l~~~--~g~~vvg~~d~ 37 (141)
T 3nkl_A 5 KKVLIYGAGSAGLQLANMLRQG--KEFHPIAFIDD 37 (141)
T ss_dssp EEEEEECCSHHHHHHHHHHHHS--SSEEEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCcEEEEEEEC
Confidence 4899999999999999998764 35899888663
No 322
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=61.53 E-value=8.2 Score=37.90 Aligned_cols=84 Identities=15% Similarity=0.088 Sum_probs=54.7
Q ss_pred eEEEE-cC-ChhHHHHHHHHHhCCCCCceEE-EEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeC
Q 012940 88 KVAIN-GF-GRIGRNFLRCWHGRKDSPLDVV-VVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (453)
Q Consensus 88 kVaIn-Gf-GrIGR~vlr~l~~r~~~~ieiV-aInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~ 164 (453)
+++|+ |+ |+.|+.+++.+.+.. ++++ .||.. . .+.. +.| ++++.
T Consensus 15 siaVV~Gasg~~G~~~~~~l~~~G---~~~v~~VnP~-~------------------------~g~~--i~G--~~vy~- 61 (305)
T 2fp4_A 15 TKVICQGFTGKQGTFHSQQALEYG---TNLVGGTTPG-K------------------------GGKT--HLG--LPVFN- 61 (305)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHT---CEEEEEECTT-C------------------------TTCE--ETT--EEEES-
T ss_pred cEEEEECCCCCHHHHHHHHHHHCC---CcEEEEeCCC-c------------------------Ccce--ECC--eeeec-
Confidence 57888 95 999999999887653 5655 45421 0 0111 334 23432
Q ss_pred CCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEE
Q 012940 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVII 206 (453)
Q Consensus 165 ~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVII 206 (453)
+.++++- +.++|+++-+++.....+.+...+++|+|.+|+
T Consensus 62 -sl~el~~-~~~vD~avI~vP~~~~~~~~~e~i~~Gi~~iv~ 101 (305)
T 2fp4_A 62 -TVKEAKE-QTGATASVIYVPPPFAAAAINEAIDAEVPLVVC 101 (305)
T ss_dssp -SHHHHHH-HHCCCEEEECCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred -hHHHhhh-cCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEE
Confidence 2333331 126899999999887788888899999988544
No 323
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=61.53 E-value=5.4 Score=41.12 Aligned_cols=33 Identities=21% Similarity=0.176 Sum_probs=26.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
+||+|+|+|.+|..+...|.+.. +..+|++++.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g-~G~~V~~~d~ 38 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMC-PEIRVTVVDV 38 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHC-TTSEEEEECS
T ss_pred cEEEEECCCHHHHHHHHHHHhcC-CCCEEEEEEC
Confidence 69999999999999999887652 1368877753
No 324
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=61.34 E-value=9.2 Score=37.24 Aligned_cols=29 Identities=24% Similarity=0.256 Sum_probs=23.8
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEc
Q 012940 88 KVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (453)
Q Consensus 88 kVaInGfGrIGR~vlr~l~~r~~~~i-eiVaIn 119 (453)
+|.|+|.|.||..+++++..+. . +|+++.
T Consensus 170 ~VlV~GaG~vG~~~~q~a~~~G---a~~Vi~~~ 199 (348)
T 2d8a_A 170 SVLITGAGPLGLLGIAVAKASG---AYPVIVSE 199 (348)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT---CCSEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC---CCEEEEEC
Confidence 7999999999999999887653 4 677764
No 325
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=61.24 E-value=4.6 Score=36.97 Aligned_cols=30 Identities=23% Similarity=0.333 Sum_probs=23.8
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
+.+|.|.|+|++|+.+++.|.++ .. +++|.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~---g~-v~vid 38 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGS---EV-FVLAE 38 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTS---EE-EEEES
T ss_pred CCEEEEECCChHHHHHHHHHHhC---Ce-EEEEE
Confidence 45899999999999999988754 25 77774
No 326
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=61.13 E-value=7.7 Score=37.21 Aligned_cols=31 Identities=23% Similarity=0.394 Sum_probs=24.5
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCc--eEEEEc
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPL--DVVVVN 119 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~i--eiVaIn 119 (453)
++||+|.|.|.||..++..|.... . +|+.+.
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g---~~~~V~l~d 39 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRG---IAREIVLED 39 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CCSEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC---CCCEEEEEe
Confidence 469999999999999998887653 3 665554
No 327
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=60.83 E-value=48 Score=31.94 Aligned_cols=32 Identities=25% Similarity=0.242 Sum_probs=26.5
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~ 121 (453)
-||.|.|.|.+||.+++.|.+.. -+|+.+|..
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G---~~v~V~nRt 150 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQG---LQVSVLNRS 150 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEEeCC
Confidence 48999999999999999998763 477777764
No 328
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=60.82 E-value=6.4 Score=41.27 Aligned_cols=35 Identities=14% Similarity=0.215 Sum_probs=28.0
Q ss_pred ccceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 83 TVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 83 ~~m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
.-|..||||+|.|.+|..+.+.|.+.. ++|+..|.
T Consensus 7 ~~~~~~IgvIGlG~MG~~lA~~La~~G---~~V~v~dr 41 (497)
T 2p4q_A 7 HHMSADFGLIGLAVMGQNLILNAADHG---FTVCAYNR 41 (497)
T ss_dssp --CCCSEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred ccCCCCEEEEeeHHHHHHHHHHHHHCC---CEEEEEeC
Confidence 356779999999999999999998764 57777764
No 329
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=60.51 E-value=15 Score=36.09 Aligned_cols=30 Identities=20% Similarity=0.296 Sum_probs=24.6
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 88 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 88 kVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
+|.|.|.|.||...++++.... .+|+++..
T Consensus 192 ~VlV~G~G~vG~~a~qla~~~G---a~Vi~~~~ 221 (363)
T 3uog_A 192 RVVVQGTGGVALFGLQIAKATG---AEVIVTSS 221 (363)
T ss_dssp EEEEESSBHHHHHHHHHHHHTT---CEEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHHcC---CEEEEEec
Confidence 7999999999999999887653 57777753
No 330
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=60.31 E-value=5.2 Score=37.47 Aligned_cols=35 Identities=20% Similarity=0.260 Sum_probs=26.9
Q ss_pred ceeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 85 m~ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
|.+||.|.| .|.||+.+++.|.++. +..+|+++..
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~~-~g~~V~~~~r 36 (312)
T 2yy7_A 1 MNPKILIIGACGQIGTELTQKLRKLY-GTENVIASDI 36 (312)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHHH-CGGGEEEEES
T ss_pred CCceEEEECCccHHHHHHHHHHHHhC-CCCEEEEEcC
Confidence 556899999 8999999999998750 1257777754
No 331
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=60.27 E-value=7.2 Score=39.73 Aligned_cols=30 Identities=27% Similarity=0.581 Sum_probs=25.3
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
|||+|+|.|.+|..+...|.+.. .+|++++
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G---~~V~~~d 30 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARG---HEVIGVD 30 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEEE
Confidence 48999999999999999998753 5777774
No 332
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=59.65 E-value=8.7 Score=37.43 Aligned_cols=34 Identities=24% Similarity=0.310 Sum_probs=24.9
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCC
Q 012940 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (453)
Q Consensus 85 m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~ 121 (453)
|++||+|.|.|.+|..++..+.... .++ +.+-|.
T Consensus 1 M~~kI~VIGaG~vG~~~a~~la~~g--~~~-v~L~Di 34 (309)
T 1ur5_A 1 MRKKISIIGAGFVGSTTAHWLAAKE--LGD-IVLLDI 34 (309)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTT--CSE-EEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC--CCe-EEEEeC
Confidence 5579999999999999998887653 236 444444
No 333
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=59.61 E-value=6.3 Score=38.65 Aligned_cols=30 Identities=27% Similarity=0.268 Sum_probs=24.2
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 88 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 88 kVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
+|.|+|.|.||..+++++..+. .+|+++..
T Consensus 182 ~VlV~GaG~vG~~~~qlak~~G---a~Vi~~~~ 211 (360)
T 1piw_A 182 KVGIVGLGGIGSMGTLISKAMG---AETYVISR 211 (360)
T ss_dssp EEEEECCSHHHHHHHHHHHHHT---CEEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHHCC---CEEEEEcC
Confidence 7999999999999999886553 47777753
No 334
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=59.60 E-value=8.6 Score=36.60 Aligned_cols=30 Identities=17% Similarity=0.147 Sum_probs=25.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
.||+|+|.|.+|+.+++.+.... ++|+..+
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G---~~V~l~d 34 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHG---FAVTAYD 34 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CeEEEEe
Confidence 48999999999999999998763 5776664
No 335
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=59.43 E-value=7.1 Score=40.69 Aligned_cols=32 Identities=25% Similarity=0.422 Sum_probs=26.9
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
|.||||+|.|.+|..+.+.|.+.. .+|+..|.
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G---~~V~v~~r 46 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRG---YTVSIFNR 46 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTT---CCEEEECS
T ss_pred CCeEEEEccHHHHHHHHHHHHhCC---CeEEEEeC
Confidence 679999999999999999998653 57777764
No 336
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=59.03 E-value=5.9 Score=38.69 Aligned_cols=29 Identities=17% Similarity=0.206 Sum_probs=23.2
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEc
Q 012940 88 KVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (453)
Q Consensus 88 kVaInGfGrIGR~vlr~l~~r~~~~i-eiVaIn 119 (453)
+|.|+|.|.||...++++.... . +|+++.
T Consensus 169 ~VlV~GaG~vG~~a~qla~~~G---a~~Vi~~~ 198 (352)
T 3fpc_A 169 TVCVIGIGPVGLMSVAGANHLG---AGRIFAVG 198 (352)
T ss_dssp CEEEECCSHHHHHHHHHHHTTT---CSSEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC---CcEEEEEC
Confidence 6999999999999999886543 4 677764
No 337
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=58.71 E-value=9.2 Score=36.56 Aligned_cols=33 Identities=24% Similarity=0.210 Sum_probs=27.5
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcCC
Q 012940 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (453)
Q Consensus 86 ~ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd~ 121 (453)
++||.|.| +|.||+.+++.|.++. .+|+++...
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r~ 58 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLLKLN---QVVIGLDNF 58 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECC
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCC---CEEEEEeCC
Confidence 46999999 8999999999998764 588887653
No 338
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=58.29 E-value=44 Score=33.08 Aligned_cols=32 Identities=13% Similarity=0.241 Sum_probs=25.5
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcCC
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd~ 121 (453)
.+|-|-| +|.||+.+++.|.++ ..+|+++...
T Consensus 70 ~~vlVTGatG~iG~~l~~~L~~~---g~~V~~~~R~ 102 (427)
T 4f6c_A 70 GNTLLTGATGFLGAYLIEALQGY---SHRIYCFIRA 102 (427)
T ss_dssp EEEEEECTTSHHHHHHHHHHTTT---EEEEEEEEEC
T ss_pred CEEEEecCCcHHHHHHHHHHHcC---CCEEEEEECC
Confidence 5899999 899999999999654 2577777543
No 339
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=58.25 E-value=12 Score=36.81 Aligned_cols=29 Identities=21% Similarity=0.322 Sum_probs=23.2
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEc
Q 012940 88 KVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (453)
Q Consensus 88 kVaInGfGrIGR~vlr~l~~r~~~~i-eiVaIn 119 (453)
+|.|.|.|.||...++++..+. . +|+++.
T Consensus 196 ~VlV~GaG~vG~~a~q~a~~~G---a~~Vi~~~ 225 (378)
T 3uko_A 196 NVAIFGLGTVGLAVAEGAKTAG---ASRIIGID 225 (378)
T ss_dssp CEEEECCSHHHHHHHHHHHHHT---CSCEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC---CCeEEEEc
Confidence 7999999999999998886543 3 677774
No 340
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=58.22 E-value=8.8 Score=38.50 Aligned_cols=32 Identities=28% Similarity=0.296 Sum_probs=26.1
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
..+|+|.|+|+||+.+++.+.... .+|++++.
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~G---a~V~~~d~ 199 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMG---ATVTVLDI 199 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC---CEEEEEeC
Confidence 458999999999999999987653 57777654
No 341
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=57.88 E-value=16 Score=35.60 Aligned_cols=29 Identities=34% Similarity=0.344 Sum_probs=23.5
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEc
Q 012940 88 KVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (453)
Q Consensus 88 kVaInGfGrIGR~vlr~l~~r~~~~i-eiVaIn 119 (453)
+|.|+|.|.||...++++.... . +|+++.
T Consensus 174 ~VlV~GaG~vG~~aiqlak~~G---a~~Vi~~~ 203 (356)
T 1pl8_A 174 KVLVCGAGPIGMVTLLVAKAMG---AAQVVVTD 203 (356)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT---CSEEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHHcC---CCEEEEEC
Confidence 7999999999999999887553 4 677775
No 342
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=57.83 E-value=7.9 Score=40.20 Aligned_cols=34 Identities=24% Similarity=0.211 Sum_probs=26.9
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 85 m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
|++||+|+|.|.+|..+...|.+.. ...+|++++
T Consensus 8 ~~mkI~VIG~G~vG~~~A~~La~~g-~g~~V~~~D 41 (481)
T 2o3j_A 8 KVSKVVCVGAGYVGGPTCAMIAHKC-PHITVTVVD 41 (481)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHHC-TTSEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcC-CCCEEEEEE
Confidence 3469999999999999999887651 136888875
No 343
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=57.71 E-value=11 Score=33.69 Aligned_cols=34 Identities=15% Similarity=0.129 Sum_probs=26.9
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
+++|.|.| .|.||+.+++.|.++. +..+|+++..
T Consensus 4 ~~~ilVtGasG~iG~~l~~~l~~~~-~g~~V~~~~r 38 (253)
T 1xq6_A 4 LPTVLVTGASGRTGQIVYKKLKEGS-DKFVAKGLVR 38 (253)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT-TTCEEEEEES
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhcC-CCcEEEEEEc
Confidence 45899999 9999999999998762 1368777754
No 344
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=57.56 E-value=8.7 Score=36.07 Aligned_cols=30 Identities=27% Similarity=0.267 Sum_probs=24.6
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 88 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 88 kVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
||+|.|+|.+|+.+++.|.+.. .+|+..|.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g---~~v~v~~r 147 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAG---LEVWVWNR 147 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred eEEEECCcHHHHHHHHHHHHCC---CEEEEEEC
Confidence 8999999999999999998753 36666654
No 345
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=57.53 E-value=8.8 Score=37.41 Aligned_cols=30 Identities=17% Similarity=0.161 Sum_probs=24.5
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
+||+|+|.|.+|..+...|.... .+|..+.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g---~~V~~~~ 33 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAG---EAINVLA 33 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTT---CCEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHCC---CEEEEEE
Confidence 69999999999999999888653 4666565
No 346
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=57.26 E-value=8.9 Score=40.39 Aligned_cols=30 Identities=30% Similarity=0.523 Sum_probs=25.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
.+|+|.|+|.||+.+++.+.... .+|++++
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~G---a~Viv~d 304 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQG---ARVSVTE 304 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHHCC---CEEEEEe
Confidence 48999999999999999987653 5777765
No 347
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=57.03 E-value=10 Score=37.54 Aligned_cols=31 Identities=23% Similarity=0.244 Sum_probs=24.3
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 88 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 88 kVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
+|.|+|.|.||...++++.... -.+|+++..
T Consensus 198 ~VlV~GaG~vG~~aiqlak~~G--a~~Vi~~~~ 228 (380)
T 1vj0_A 198 TVVIQGAGPLGLFGVVIARSLG--AENVIVIAG 228 (380)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--BSEEEEEES
T ss_pred EEEEECcCHHHHHHHHHHHHcC--CceEEEEcC
Confidence 7999999999999999887653 137777753
No 348
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=56.25 E-value=6.2 Score=39.08 Aligned_cols=24 Identities=21% Similarity=0.252 Sum_probs=20.6
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhC
Q 012940 85 AKLKVAINGFGRIGRNFLRCWHGR 108 (453)
Q Consensus 85 m~ikVaInGfGrIGR~vlr~l~~r 108 (453)
|++||+|+|.|.+|..+...|...
T Consensus 20 ~~~kI~iIGaG~mG~alA~~L~~~ 43 (375)
T 1yj8_A 20 GPLKISILGSGNWASAISKVVGTN 43 (375)
T ss_dssp SCBCEEEECCSHHHHHHHHHHHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHHc
Confidence 456999999999999999988653
No 349
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=55.87 E-value=13 Score=34.46 Aligned_cols=30 Identities=27% Similarity=0.668 Sum_probs=25.6
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
.||.|.| +|.||+.+++.|.++. .+|+++.
T Consensus 13 ~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~ 43 (292)
T 1vl0_A 13 MKILITGANGQLGREIQKQLKGKN---VEVIPTD 43 (292)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSS---EEEEEEC
T ss_pred ceEEEECCCChHHHHHHHHHHhCC---CeEEecc
Confidence 5899999 9999999999998753 6888775
No 350
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=55.56 E-value=10 Score=37.51 Aligned_cols=31 Identities=19% Similarity=0.289 Sum_probs=26.9
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
.||+|.|.|.+|+.+++++.+.. +++++++.
T Consensus 15 k~IlIlG~G~~g~~la~aa~~~G---~~vi~~d~ 45 (389)
T 3q2o_A 15 KTIGIIGGGQLGRMMALAAKEMG---YKIAVLDP 45 (389)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CEEEEEeC
Confidence 48999999999999999998763 79988864
No 351
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=55.37 E-value=30 Score=35.86 Aligned_cols=83 Identities=16% Similarity=0.200 Sum_probs=51.5
Q ss_pred eeEEEEcCChhHHH-HHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeCC
Q 012940 87 LKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (453)
Q Consensus 87 ikVaInGfGrIGR~-vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~~ 165 (453)
.||.|+|.|.+|.. ++|.|.++. .+|.+ .|.........|-+ . | |.+....
T Consensus 23 ~~v~viGiG~sG~s~~A~~l~~~G---~~V~~-~D~~~~~~~~~l~~---------------~-------g--i~~~~g~ 74 (494)
T 4hv4_A 23 RHIHFVGIGGAGMGGIAEVLANEG---YQISG-SDLAPNSVTQHLTA---------------L-------G--AQIYFHH 74 (494)
T ss_dssp CEEEEETTTSTTHHHHHHHHHHTT---CEEEE-ECSSCCHHHHHHHH---------------T-------T--CEEESSC
T ss_pred CEEEEEEEcHhhHHHHHHHHHhCC---CeEEE-EECCCCHHHHHHHH---------------C-------C--CEEECCC
Confidence 48999999999996 799998874 46544 45422222222211 1 1 1222223
Q ss_pred CCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCC
Q 012940 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGA 201 (453)
Q Consensus 166 dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGA 201 (453)
+++++. ++|+||=+.|.-.+.+....+.+.|.
T Consensus 75 ~~~~~~----~~d~vV~Spgi~~~~p~~~~a~~~gi 106 (494)
T 4hv4_A 75 RPENVL----DASVVVVSTAISADNPEIVAAREARI 106 (494)
T ss_dssp CGGGGT----TCSEEEECTTSCTTCHHHHHHHHTTC
T ss_pred CHHHcC----CCCEEEECCCCCCCCHHHHHHHHCCC
Confidence 444432 58999999998777777667777776
No 352
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=55.08 E-value=10 Score=37.85 Aligned_cols=32 Identities=22% Similarity=0.189 Sum_probs=25.1
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 85 m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
+++||+|.|.|.+|..+...|.+.. .+|..++
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~G---~~V~l~~ 59 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARKG---QKVRLWS 59 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTTT---CCEEEEC
T ss_pred cCCeEEEECccHHHHHHHHHHHHCC---CeEEEEe
Confidence 3579999999999999999998653 3555554
No 353
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=54.61 E-value=7.2 Score=41.12 Aligned_cols=93 Identities=19% Similarity=0.245 Sum_probs=53.1
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCc---eEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEE
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPL---DVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVV 162 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~i---eiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~ 162 (453)
+.||.|.|+|-||+.+++.+..+. ++ +|+.+...-....+.-.+ |. ... .+.|.
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~--dv~~~~I~vaD~~~~~~~~~~~~------g~---~~~------------~~~Vd 69 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKF--DIKPSQVTIIAAEGTKVDVAQQY------GV---SFK------------LQQIT 69 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHB--CCCGGGEEEEESSCCSCCHHHHH------TC---EEE------------ECCCC
T ss_pred CCCEEEECcCHHHHHHHHHHHhCC--CCceeEEEEeccchhhhhHHhhc------CC---cee------------EEecc
Confidence 468999999999999999998763 24 555553210001110000 00 000 00110
Q ss_pred eCCC----CCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEe
Q 012940 163 SNRD----PLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIIT 207 (453)
Q Consensus 163 ~~~d----p~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIIS 207 (453)
. .+ .+.+ -++ + |+||.++-.+.+...+...+++|+ -.|+
T Consensus 70 a-dnv~~~l~aL-l~~-~-DvVIN~s~~~~~l~Im~acleaGv--~YlD 112 (480)
T 2ph5_A 70 P-QNYLEVIGST-LEE-N-DFLIDVSIGISSLALIILCNQKGA--LYIN 112 (480)
T ss_dssp T-TTHHHHTGGG-CCT-T-CEEEECCSSSCHHHHHHHHHHHTC--EEEE
T ss_pred c-hhHHHHHHHH-hcC-C-CEEEECCccccCHHHHHHHHHcCC--CEEE
Confidence 0 10 1111 122 3 999998888888899999999999 3454
No 354
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=54.27 E-value=12 Score=36.37 Aligned_cols=33 Identities=15% Similarity=0.148 Sum_probs=26.6
Q ss_pred ceeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 85 m~ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
|+.+|.|.| .|.||+.+++.|.++. .+|+++..
T Consensus 23 M~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 56 (375)
T 1t2a_A 23 MRNVALITGITGQDGSYLAEFLLEKG---YEVHGIVR 56 (375)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred cCcEEEEECCCchHHHHHHHHHHHCC---CEEEEEEC
Confidence 445899999 8999999999998763 58877754
No 355
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=54.18 E-value=6.9 Score=38.62 Aligned_cols=91 Identities=16% Similarity=0.145 Sum_probs=49.4
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeCC
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSNR 165 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~~ 165 (453)
-+|.|+| .|.||...++++.... ..+|+++.. +.+.+.++.+ +| .+. .++.+. .+ . .
T Consensus 173 ~~VlV~Ga~G~vG~~a~qlak~~~--g~~Vi~~~~--~~~~~~~~~~----lG---ad~--------vi~~~~-~~-~-~ 230 (363)
T 4dvj_A 173 PAILIVGGAGGVGSIAVQIARQRT--DLTVIATAS--RPETQEWVKS----LG---AHH--------VIDHSK-PL-A-A 230 (363)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHHC--CSEEEEECS--SHHHHHHHHH----TT---CSE--------EECTTS-CH-H-H
T ss_pred CEEEEECCCCHHHHHHHHHHHHhc--CCEEEEEeC--CHHHHHHHHH----cC---CCE--------EEeCCC-CH-H-H
Confidence 4799999 9999999998876421 258877754 2333333322 11 010 111100 00 0 0
Q ss_pred CCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCC
Q 012940 166 DPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGA 201 (453)
Q Consensus 166 dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGA 201 (453)
...++ ...++|+||||+|.....+.+-.+++.|.
T Consensus 231 ~v~~~--~~~g~Dvvid~~g~~~~~~~~~~~l~~~G 264 (363)
T 4dvj_A 231 EVAAL--GLGAPAFVFSTTHTDKHAAEIADLIAPQG 264 (363)
T ss_dssp HHHTT--CSCCEEEEEECSCHHHHHHHHHHHSCTTC
T ss_pred HHHHh--cCCCceEEEECCCchhhHHHHHHHhcCCC
Confidence 01112 22489999999996434455556666665
No 356
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=54.06 E-value=11 Score=38.22 Aligned_cols=32 Identities=19% Similarity=0.107 Sum_probs=25.7
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
..||+|+|+|+||+.+++.+.... .+|++++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~G---a~V~v~D~ 203 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLG---AIVRAFDT 203 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC---CEEEEEcC
Confidence 458999999999999999987653 57666653
No 357
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=54.04 E-value=9.2 Score=38.65 Aligned_cols=31 Identities=26% Similarity=0.443 Sum_probs=25.6
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEcC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVND 120 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~i-eiVaInd 120 (453)
.+|+|.|+|.||+.+++.|.... + +|+++|.
T Consensus 168 ~~VlIiGaG~iG~~~a~~l~~~G---~~~V~v~~r 199 (404)
T 1gpj_A 168 KTVLVVGAGEMGKTVAKSLVDRG---VRAVLVANR 199 (404)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHC---CSEEEEECS
T ss_pred CEEEEEChHHHHHHHHHHHHHCC---CCEEEEEeC
Confidence 48999999999999999987653 5 7777775
No 358
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=53.83 E-value=12 Score=41.42 Aligned_cols=148 Identities=15% Similarity=0.203 Sum_probs=76.3
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhh-------hhhhhccccceeecCceEEEecCCeEEECCeEE
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKN-------ASHLLKYDSLLGTFKADVKIVDNETISVDGKLI 159 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~-------~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I 159 (453)
-||||+|.|.+|+.+...+... .++|+-+ |. +.+. +...++.....++...... .. ..+
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~a---G~~V~l~-D~-~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~--~~-------~~~ 382 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARV---GISVVAV-ES-DPKQLDAAKKIITFTLEKEASRAHQNGQAS--AK-------PKL 382 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT---TCEEEEE-CS-SHHHHHHHHHHHHHHHHHHHHHHHTTTCCC--CC-------CCE
T ss_pred cEEEEEcccHHHHHHHHHHHhC---CCchhcc-cc-hHhhhhhHHHHHHHHHHHHHHhccccchhh--hh-------hhh
Confidence 3799999999999999887754 3676555 33 2222 2222211111111111111 00 123
Q ss_pred EEEeCCCCCCCCccccCccEEEcCCCCCCChh-----hHHHHHHcCCCEEEEeCCCC--------CCCCCe---EEeccC
Q 012940 160 KVVSNRDPLQLPWAELGIDIVIEGTGVFVDGP-----GAGKHIQAGAKKVIITAPAK--------GADIPT---YVVGVN 223 (453)
Q Consensus 160 ~v~~~~dp~~l~W~~~gvDiVie~TG~f~s~e-----~a~~hl~aGAkkVIISaps~--------d~dvPt---vV~gVN 223 (453)
... .+.+.+ .++|+||||.-.-+..+ ....+...+| ++-|+.|. ..+-|- ..-=.|
T Consensus 383 ~~~--~~~~~l----~~aDlVIEAV~E~l~iK~~vf~~le~~~~~~a--IlASNTSsl~i~~ia~~~~~p~r~ig~HFfn 454 (742)
T 3zwc_A 383 RFS--SSTKEL----STVDLVVEAVFEDMNLKKKVFAELSALCKPGA--FLCTNTSALNVDDIASSTDRPQLVIGTHFFS 454 (742)
T ss_dssp EEE--SCGGGG----GSCSEEEECCCSCHHHHHHHHHHHHHHSCTTC--EEEECCSSSCHHHHHTTSSCGGGEEEEECCS
T ss_pred ccc--CcHHHH----hhCCEEEEeccccHHHHHHHHHHHhhcCCCCc--eEEecCCcCChHHHHhhcCCccccccccccC
Confidence 332 334433 27999999976544432 1234455566 66687762 112231 122344
Q ss_pred ccccCccCCeEEecCCcchhhhhhHHHHHhhhcCe
Q 012940 224 EKDYDHEVANIVSNASCTTNCLAPFVKVMDEELGI 258 (453)
Q Consensus 224 ~~~~~~~~~~IVSnaSCTTn~Lapvlk~L~d~fGI 258 (453)
+-.+-+- -.||..+..+-..+.-+.... +..|-
T Consensus 455 P~~~m~L-VEvi~g~~Ts~e~~~~~~~~~-~~lgK 487 (742)
T 3zwc_A 455 PAHVMRL-LEVIPSRYSSPTTIATVMSLS-KKIGK 487 (742)
T ss_dssp STTTCCE-EEEEECSSCCHHHHHHHHHHH-HHTTC
T ss_pred CCCCCce-EEEecCCCCCHHHHHHHHHHH-HHhCC
Confidence 4444332 357877777777777666554 44553
No 359
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=53.67 E-value=9.6 Score=35.20 Aligned_cols=24 Identities=13% Similarity=0.404 Sum_probs=21.3
Q ss_pred ceeeEEEEc-CChhHHHHHHHHHhC
Q 012940 85 AKLKVAING-FGRIGRNFLRCWHGR 108 (453)
Q Consensus 85 m~ikVaInG-fGrIGR~vlr~l~~r 108 (453)
+++||.|.| +|.||+.+++.|.++
T Consensus 5 ~~~~vlVtGatG~iG~~l~~~L~~~ 29 (319)
T 4b8w_A 5 QSMRILVTGGSGLVGKAIQKVVADG 29 (319)
T ss_dssp CCCEEEEETCSSHHHHHHHHHHHTT
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhc
Confidence 357899999 899999999999875
No 360
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=53.49 E-value=12 Score=35.41 Aligned_cols=32 Identities=13% Similarity=0.138 Sum_probs=25.6
Q ss_pred ceeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 85 m~ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
|.+||-|-| .|.||+.+++.|.++. .+|+++.
T Consensus 8 ~~~~vlVTGatGfIG~~l~~~Ll~~G---~~V~~~~ 40 (338)
T 2rh8_A 8 GKKTACVVGGTGFVASLLVKLLLQKG---YAVNTTV 40 (338)
T ss_dssp -CCEEEEECTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCC---CEEEEEE
Confidence 456899999 9999999999998764 4777643
No 361
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=53.43 E-value=22 Score=35.58 Aligned_cols=96 Identities=15% Similarity=0.059 Sum_probs=55.2
Q ss_pred eeEEEEc-CChhHHHHHHH--HHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeE--EEE
Q 012940 87 LKVAING-FGRIGRNFLRC--WHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKL--IKV 161 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~--l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~--I~v 161 (453)
+||-|.| +|+.++.++.. +.+| ++.++|+.-++..- + || ..+.++.+. +.+
T Consensus 11 tkviV~G~~Gk~~~~ml~~~~~~~r--~~~~vVagV~P~~~---------g--~~-----------~~v~~G~~~~Gvpv 66 (334)
T 3mwd_B 11 TKAIVWGMQTRAVQGMLDFDYVCSR--DEPSVAAMVYPFTG---------D--HK-----------QKFYWGHKEILIPV 66 (334)
T ss_dssp CCEEEESCCHHHHHHHHHHHHHTTC--SSCSEEEEECTTSC---------S--EE-----------EEEEETTEEEEEEE
T ss_pred CeEEEECCchHHHHHHHHhcccccC--CCceEEEEEcCCCC---------C--cc-----------ceEeccCccCCcee
Confidence 6899999 79988888876 3344 45788887765110 0 00 122233332 455
Q ss_pred EeCCCCCCCCcccc-CccEEEcCCCCCCChhhHHHHHH-cCCCEEEE-eCC
Q 012940 162 VSNRDPLQLPWAEL-GIDIVIEGTGVFVDGPGAGKHIQ-AGAKKVII-TAP 209 (453)
Q Consensus 162 ~~~~dp~~l~W~~~-gvDiVie~TG~f~s~e~a~~hl~-aGAkkVII-Sap 209 (453)
+. +.++++= +. ++|+++.+++.....+.+...++ +|++.||+ |..
T Consensus 67 y~--sv~ea~~-~~p~~DlaVi~vp~~~a~~ai~ea~~~~Gv~~vViiT~G 114 (334)
T 3mwd_B 67 FK--NMADAMR-KHPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEG 114 (334)
T ss_dssp ES--SHHHHHH-HCTTCCEEEECCCTTTHHHHHHHHTTSTTCCEEEECCSC
T ss_pred eC--CHHHHhh-cCCCCcEEEEecCHHHHHHHHHHHHHHCCCCEEEEECCC
Confidence 43 2222210 11 58999998876544444455666 88887776 543
No 362
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=53.27 E-value=5.8 Score=36.63 Aligned_cols=32 Identities=13% Similarity=0.171 Sum_probs=25.3
Q ss_pred ceeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 85 m~ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
|+.||.|.| .|.||+.+++.|.++. .+|+++.
T Consensus 1 M~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~ 33 (267)
T 3ay3_A 1 MLNRLLVTGAAGGVGSAIRPHLGTLA---HEVRLSD 33 (267)
T ss_dssp CEEEEEEESTTSHHHHHHGGGGGGTE---EEEEECC
T ss_pred CCceEEEECCCCHHHHHHHHHHHhCC---CEEEEEe
Confidence 445899999 8999999999888653 5766654
No 363
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=52.51 E-value=9.7 Score=36.84 Aligned_cols=30 Identities=27% Similarity=0.337 Sum_probs=24.7
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 88 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 88 kVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
+|.|+|.|.||...++++..+. .+|+++..
T Consensus 169 ~VlV~GaG~vG~~a~qla~~~G---a~Vi~~~~ 198 (340)
T 3s2e_A 169 WVVISGIGGLGHVAVQYARAMG---LRVAAVDI 198 (340)
T ss_dssp EEEEECCSTTHHHHHHHHHHTT---CEEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHHCC---CeEEEEeC
Confidence 7999999999999999887653 58888753
No 364
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=52.11 E-value=20 Score=35.56 Aligned_cols=23 Identities=17% Similarity=0.261 Sum_probs=19.9
Q ss_pred eeeEEEEcCChhHHHHHHHHHhC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGR 108 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r 108 (453)
.+||+|.|.|.||..++..+..+
T Consensus 19 ~~kV~ViGaG~vG~~~a~~l~~~ 41 (331)
T 4aj2_A 19 QNKITVVGVGAVGMACAISILMK 41 (331)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC
Confidence 36999999999999988877765
No 365
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=52.08 E-value=19 Score=34.80 Aligned_cols=31 Identities=32% Similarity=0.358 Sum_probs=24.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
-+|.|.|.|.||..+++++..+. .+|+++..
T Consensus 166 ~~VlV~GaG~vG~~~~~~a~~~G---a~Vi~~~~ 196 (339)
T 1rjw_A 166 EWVAIYGIGGLGHVAVQYAKAMG---LNVVAVDI 196 (339)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTT---CEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHcC---CEEEEEeC
Confidence 37999999999999999887653 47777753
No 366
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=51.74 E-value=14 Score=34.25 Aligned_cols=30 Identities=13% Similarity=0.354 Sum_probs=24.9
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
|||.|.| .|.||+.+++.|. +. .+|+++..
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g---~~V~~~~r 31 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PV---GNLIALDV 31 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TT---SEEEEECT
T ss_pred CeEEEECCCCHHHHHHHHHhh-cC---CeEEEecc
Confidence 3899999 8999999999987 53 58888754
No 367
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=51.39 E-value=13 Score=37.17 Aligned_cols=32 Identities=16% Similarity=0.118 Sum_probs=25.5
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
..||+|+|+|+||+.+++.+.... .+|++++-
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~G---a~V~~~d~ 203 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLG---AVVMATDV 203 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 468999999999999999987653 56666653
No 368
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=51.27 E-value=29 Score=33.71 Aligned_cols=29 Identities=24% Similarity=0.134 Sum_probs=23.5
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 88 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 88 kVaInGfGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
+|.|+|.|.||..+++++..+. .+|+++.
T Consensus 171 ~VlV~GaG~vG~~a~qla~~~G---a~Vi~~~ 199 (352)
T 1e3j_A 171 TVLVIGAGPIGLVSVLAAKAYG---AFVVCTA 199 (352)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHHcC---CEEEEEc
Confidence 7999999999999999887653 4666664
No 369
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=51.19 E-value=11 Score=38.54 Aligned_cols=32 Identities=13% Similarity=0.007 Sum_probs=25.5
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
..||+|+|+|+||+.+++.+.... .+|++++.
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lG---a~V~v~D~ 215 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLG---AKTTGYDV 215 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHT---CEEEEECS
T ss_pred CCEEEEECchHHHHHHHHHHHHCC---CEEEEEeC
Confidence 359999999999999999987653 47666653
No 370
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=51.17 E-value=14 Score=34.44 Aligned_cols=31 Identities=26% Similarity=0.498 Sum_probs=25.9
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
|||-|-| .|.||+.+++.|.++. .+|+++..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 32 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELG---YEVVVVDN 32 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhCC---CEEEEEeC
Confidence 4899999 8999999999998764 58877754
No 371
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=50.90 E-value=14 Score=35.84 Aligned_cols=33 Identities=18% Similarity=0.217 Sum_probs=26.5
Q ss_pred ceeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 85 m~ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
|+.+|.|.| .|.||+.+++.|.++. .+|+++..
T Consensus 27 M~k~vlVtGatG~IG~~l~~~L~~~g---~~V~~~~r 60 (381)
T 1n7h_A 27 PRKIALITGITGQDGSYLTEFLLGKG---YEVHGLIR 60 (381)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred hCCeEEEEcCCchHHHHHHHHHHHCC---CEEEEEec
Confidence 445899999 8999999999998763 58877754
No 372
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=50.82 E-value=10 Score=37.17 Aligned_cols=29 Identities=17% Similarity=0.141 Sum_probs=22.8
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEc
Q 012940 88 KVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (453)
Q Consensus 88 kVaInGfGrIGR~vlr~l~~r~~~~i-eiVaIn 119 (453)
+|.|+|.|.||...++++.... . .|+++.
T Consensus 193 ~VlV~GaG~vG~~a~qlak~~G---a~~Vi~~~ 222 (371)
T 1f8f_A 193 SFVTWGAGAVGLSALLAAKVCG---ASIIIAVD 222 (371)
T ss_dssp EEEEESCSHHHHHHHHHHHHHT---CSEEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHHcC---CCeEEEEC
Confidence 7999999999999998876542 3 566664
No 373
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=50.77 E-value=15 Score=34.71 Aligned_cols=31 Identities=32% Similarity=0.437 Sum_probs=25.9
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
+||.|.| .|.||+.+++.|.++. .+|+++..
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r 33 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEG---LSVVVVDN 33 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCC---CEEEEEeC
Confidence 5899999 8999999999998763 57777754
No 374
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=50.70 E-value=24 Score=33.79 Aligned_cols=30 Identities=20% Similarity=0.249 Sum_probs=23.8
Q ss_pred eEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 88 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 88 kVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
+|.|.| .|.||...++++..+. .+|+++..
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~G---a~vi~~~~ 182 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRG---YTVEASTG 182 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT---CCEEEEES
T ss_pred eEEEecCCCHHHHHHHHHHHHCC---CEEEEEEC
Confidence 699999 5999999999887653 46777654
No 375
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=50.59 E-value=26 Score=34.32 Aligned_cols=29 Identities=17% Similarity=0.343 Sum_probs=23.6
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEc
Q 012940 88 KVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (453)
Q Consensus 88 kVaInGfGrIGR~vlr~l~~r~~~~i-eiVaIn 119 (453)
+|.|+|.|.||..+++++..+. . .|+++.
T Consensus 194 ~VlV~GaG~vG~~a~qla~~~G---a~~Vi~~~ 223 (374)
T 2jhf_A 194 TCAVFGLGGVGLSVIMGCKAAG---AARIIGVD 223 (374)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT---CSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC---CCeEEEEc
Confidence 7999999999999999887653 4 677774
No 376
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=50.04 E-value=19 Score=35.18 Aligned_cols=31 Identities=10% Similarity=0.081 Sum_probs=23.9
Q ss_pred eeEEEEcCChhHHHH-HHHH-HhCCCCCce-EEEEcC
Q 012940 87 LKVAINGFGRIGRNF-LRCW-HGRKDSPLD-VVVVND 120 (453)
Q Consensus 87 ikVaInGfGrIGR~v-lr~l-~~r~~~~ie-iVaInd 120 (453)
-+|.|+|.|.||... ++++ .... .+ |+++..
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~G---a~~Vi~~~~ 207 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKG---YENLYCLGR 207 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTC---CCEEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcC---CcEEEEEeC
Confidence 379999999999999 8877 5442 45 777764
No 377
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=49.97 E-value=19 Score=35.65 Aligned_cols=32 Identities=22% Similarity=0.332 Sum_probs=27.1
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
..||+|.|-|.+||.+++++.+.. ++++++..
T Consensus 12 ~~~IlIlG~G~lg~~la~aa~~lG---~~viv~d~ 43 (377)
T 3orq_A 12 GATIGIIGGGQLGKMMAQSAQKMG---YKVVVLDP 43 (377)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC---CEEEEEEC
Confidence 358999999999999999998763 78888853
No 378
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=49.92 E-value=16 Score=34.59 Aligned_cols=34 Identities=12% Similarity=0.102 Sum_probs=26.9
Q ss_pred ceeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcCC
Q 012940 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (453)
Q Consensus 85 m~ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd~ 121 (453)
+.+||-|-| .|.||+.+++.|.++. .+|+++...
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~r~ 47 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEKG---YRVHGLVAR 47 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEECC
T ss_pred cCCeEEEECCCChHHHHHHHHHHHCC---CeEEEEeCC
Confidence 446999999 8999999999998764 588877643
No 379
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=49.46 E-value=18 Score=34.89 Aligned_cols=30 Identities=13% Similarity=0.128 Sum_probs=24.7
Q ss_pred eEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 88 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 88 kVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
+|.|.| .|.||...++++..+. .+|+++..
T Consensus 151 ~vlV~Ga~g~iG~~~~~~a~~~G---a~Vi~~~~ 181 (334)
T 3qwb_A 151 YVLLFAAAGGVGLILNQLLKMKG---AHTIAVAS 181 (334)
T ss_dssp EEEESSTTBHHHHHHHHHHHHTT---CEEEEEES
T ss_pred EEEEECCCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 799999 8999999999887653 57777754
No 380
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=49.46 E-value=55 Score=33.27 Aligned_cols=88 Identities=28% Similarity=0.358 Sum_probs=54.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCC---hhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEe
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGG---VKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS 163 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~---~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~ 163 (453)
.||.|+|.|..|..+++.|.++. .+|.+. |... ......|-+ . | |++..
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~G---~~V~~~-D~~~~~~~~~~~~L~~---------------~-------g--i~~~~ 61 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKLG---AIVTVN-DGKPFDENPTAQSLLE---------------E-------G--IKVVC 61 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHTT---CEEEEE-ESSCGGGCHHHHHHHH---------------T-------T--CEEEE
T ss_pred CEEEEEeeCHHHHHHHHHHHhCC---CEEEEE-eCCcccCChHHHHHHh---------------C-------C--CEEEE
Confidence 48999999999999999998874 465544 3311 111111111 1 1 12222
Q ss_pred CCCCCCCCccccC-ccEEEcCCCCCCChhhHHHHHHcCCCEEEEe
Q 012940 164 NRDPLQLPWAELG-IDIVIEGTGVFVDGPGAGKHIQAGAKKVIIT 207 (453)
Q Consensus 164 ~~dp~~l~W~~~g-vDiVie~TG~f~s~e~a~~hl~aGAkkVIIS 207 (453)
..+++++ +. + .|+||=+.|.-.+.+....+.+.|.+ |++
T Consensus 62 g~~~~~~-~~--~~~d~vv~spgi~~~~p~~~~a~~~gi~--v~~ 101 (451)
T 3lk7_A 62 GSHPLEL-LD--EDFCYMIKNPGIPYNNPMVKKALEKQIP--VLT 101 (451)
T ss_dssp SCCCGGG-GG--SCEEEEEECTTSCTTSHHHHHHHHTTCC--EEC
T ss_pred CCChHHh-hc--CCCCEEEECCcCCCCChhHHHHHHCCCc--EEe
Confidence 2334332 11 4 89999999988887777888888873 554
No 381
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=49.43 E-value=21 Score=35.03 Aligned_cols=29 Identities=14% Similarity=0.272 Sum_probs=23.4
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEc
Q 012940 88 KVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (453)
Q Consensus 88 kVaInGfGrIGR~vlr~l~~r~~~~i-eiVaIn 119 (453)
+|.|.|.|.||...++++.... . +|+++.
T Consensus 198 ~VlV~GaG~vG~~aiqlak~~G---a~~Vi~~~ 227 (376)
T 1e3i_A 198 TCAVFGLGCVGLSAIIGCKIAG---ASRIIAID 227 (376)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT---CSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC---CCeEEEEc
Confidence 7999999999999999887653 4 677764
No 382
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=49.23 E-value=15 Score=34.89 Aligned_cols=32 Identities=9% Similarity=0.158 Sum_probs=26.6
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 85 m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
|+|||+|.|-| .|+.+++++.++. ++++.+..
T Consensus 1 m~m~Ililg~g-~~~~l~~a~~~~G---~~v~~~~~ 32 (334)
T 2r85_A 1 MKVRIATYASH-SALQILKGAKDEG---FETIAFGS 32 (334)
T ss_dssp CCSEEEEESST-THHHHHHHHHHTT---CCEEEESC
T ss_pred CceEEEEECCh-hHHHHHHHHHhCC---CEEEEEEC
Confidence 67899999999 9999999998764 68777753
No 383
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=49.13 E-value=11 Score=36.67 Aligned_cols=23 Identities=30% Similarity=0.381 Sum_probs=20.2
Q ss_pred eeeEEEEcCChhHHHHHHHHHhC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGR 108 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r 108 (453)
++||+|.|.|.+|..+...|...
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~ 30 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGN 30 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhc
Confidence 46999999999999999988754
No 384
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=49.03 E-value=16 Score=34.53 Aligned_cols=31 Identities=26% Similarity=0.482 Sum_probs=25.9
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
+||.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~r 33 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQG---IDLIVFDN 33 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred cEEEEeCCCchhHHHHHHHHHhCC---CEEEEEeC
Confidence 4899999 9999999999998763 58877753
No 385
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=48.97 E-value=36 Score=34.96 Aligned_cols=93 Identities=14% Similarity=-0.010 Sum_probs=54.6
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEe-CC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVS-NR 165 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~-~~ 165 (453)
.||.|+|.|++|...++.|.+.. -+|+.|...... .+..|.+ ... +.+.. .-
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~g---a~V~vi~~~~~~-~~~~l~~----------------~~~-------i~~~~~~~ 65 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEAG---ARLTVNALTFIP-QFTVWAN----------------EGM-------LTLVEGPF 65 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---BEEEEEESSCCH-HHHHHHT----------------TTS-------CEEEESSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCc---CEEEEEcCCCCH-HHHHHHh----------------cCC-------EEEEECCC
Confidence 48999999999999999998764 355556542222 2222221 011 11111 11
Q ss_pred CCCCCCccccCccEEEcCCCCC-CChhhHHHHHHcCCCEEEEeCCC
Q 012940 166 DPLQLPWAELGIDIVIEGTGVF-VDGPGAGKHIQAGAKKVIITAPA 210 (453)
Q Consensus 166 dp~~l~W~~~gvDiVie~TG~f-~s~e~a~~hl~aGAkkVIISaps 210 (453)
.+++++ +.|+||=|||.- +...-+..+.+.|..-.+++.|.
T Consensus 66 ~~~~l~----~~~lVi~at~~~~~n~~i~~~a~~~~i~vn~~d~~e 107 (457)
T 1pjq_A 66 DETLLD----SCWLAIAATDDDTVNQRVSDAAESRRIFCNVVDAPK 107 (457)
T ss_dssp CGGGGT----TCSEEEECCSCHHHHHHHHHHHHHTTCEEEETTCTT
T ss_pred CccccC----CccEEEEcCCCHHHHHHHHHHHHHcCCEEEECCCcc
Confidence 233332 689999999976 45566666677787422355554
No 386
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=48.92 E-value=15 Score=38.00 Aligned_cols=37 Identities=19% Similarity=0.193 Sum_probs=27.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhh
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASH 129 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~ 129 (453)
|||+|.|.|.+|..+...|.+ . .+|++++- +.+.+..
T Consensus 37 mkIaVIGlG~mG~~lA~~La~-G---~~V~~~D~--~~~~v~~ 73 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ-N---HEVVALDI--VQAKVDM 73 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-T---SEEEEECS--CHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHc-C---CeEEEEec--CHHHhhH
Confidence 699999999999999998774 3 68887753 4444433
No 387
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=48.90 E-value=20 Score=35.17 Aligned_cols=29 Identities=17% Similarity=0.280 Sum_probs=22.9
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEc
Q 012940 88 KVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (453)
Q Consensus 88 kVaInGfGrIGR~vlr~l~~r~~~~i-eiVaIn 119 (453)
+|.|.|.|.||...++++.... . +|+++.
T Consensus 194 ~VlV~GaG~vG~~aiqlak~~G---a~~Vi~~~ 223 (373)
T 1p0f_A 194 TCAVFGLGGVGFSAIVGCKAAG---ASRIIGVG 223 (373)
T ss_dssp EEEEECCSHHHHHHHHHHHHHT---CSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC---CCeEEEEC
Confidence 7999999999999998876542 3 676664
No 388
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=48.84 E-value=14 Score=36.38 Aligned_cols=33 Identities=24% Similarity=0.177 Sum_probs=24.2
Q ss_pred ceeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEE
Q 012940 85 AKLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVV 118 (453)
Q Consensus 85 m~ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaI 118 (453)
+++||+|.| .|.||..++..|.++. .--+|+.+
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g-~~~ev~l~ 40 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNP-LVSVLHLY 40 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCT-TEEEEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCC-CCCEEEEE
Confidence 347999999 8999999999887652 11355555
No 389
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=48.83 E-value=13 Score=35.36 Aligned_cols=31 Identities=16% Similarity=0.179 Sum_probs=25.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
.||+|.|.|.+|+.+++.|.+.. .+|+.+|.
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g---~~V~v~~r 160 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEG---AKVFLWNR 160 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHT---CEEEEECS
T ss_pred CEEEEECchHHHHHHHHHHHHcC---CEEEEEEC
Confidence 58999999999999999998653 47666664
No 390
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=48.11 E-value=14 Score=38.58 Aligned_cols=31 Identities=19% Similarity=0.324 Sum_probs=26.5
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
.+|.|.|+|++|+.+++.|.+.. .+++.|..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g---~~v~vid~ 379 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKP---VPFILIDR 379 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT---CCEEEEES
T ss_pred CCEEEECCCHHHHHHHHHHHHCC---CCEEEEEC
Confidence 58999999999999999998764 67777864
No 391
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=48.06 E-value=17 Score=35.52 Aligned_cols=32 Identities=25% Similarity=0.262 Sum_probs=26.5
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
++||.|.| .|.||+.+++.|.++. .+|+++..
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 61 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKHEG---HYVIASDW 61 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CCeEEEECCccHHHHHHHHHHHHCC---CeEEEEEC
Confidence 35899999 8999999999998763 58877754
No 392
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=48.01 E-value=20 Score=36.46 Aligned_cols=38 Identities=18% Similarity=0.133 Sum_probs=27.1
Q ss_pred eEEEEcC-ChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhh
Q 012940 88 KVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHL 130 (453)
Q Consensus 88 kVaInGf-GrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~L 130 (453)
+|.|.|. |.||...++++.... .+++++.. +.+.+.++
T Consensus 231 ~VlV~GasG~vG~~avqlak~~G---a~vi~~~~--~~~~~~~~ 269 (456)
T 3krt_A 231 NVLIWGASGGLGSYATQFALAGG---ANPICVVS--SPQKAEIC 269 (456)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTT---CEEEEEES--SHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHcC---CeEEEEEC--CHHHHHHH
Confidence 7999995 999999999887653 57777653 34444333
No 393
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=48.00 E-value=16 Score=36.27 Aligned_cols=32 Identities=25% Similarity=0.289 Sum_probs=25.9
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
..+|+|.|.|.||+.+++.+.... .+|++++.
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~G---a~V~~~d~ 197 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMG---AQVTILDV 197 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC---CEEEEEEC
Confidence 358999999999999999988763 47776653
No 394
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=47.75 E-value=14 Score=37.22 Aligned_cols=30 Identities=23% Similarity=0.330 Sum_probs=24.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
|||+|.|.|.+|..+...|.+ . .+|++++.
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G---~~V~~~d~ 30 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-Q---NEVTIVDI 30 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-T---SEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHhC-C---CEEEEEEC
Confidence 489999999999999998875 3 58777753
No 395
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=47.73 E-value=16 Score=37.53 Aligned_cols=31 Identities=16% Similarity=0.101 Sum_probs=24.9
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
..||+|+|+|+||+.+++.+.... .+|++.+
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lG---a~V~v~D 220 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLG---AVVSATD 220 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CCEEEEECCcHHHHHHHHHHHHCC---CEEEEEc
Confidence 469999999999999999998764 4665553
No 396
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=47.68 E-value=14 Score=35.66 Aligned_cols=32 Identities=22% Similarity=0.329 Sum_probs=24.2
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
+||+|.|.|.+|..++..|..... .-+|+.++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~-~~~V~l~d 33 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGV-ADDYVFID 33 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTC-CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-CCEEEEEc
Confidence 599999999999999998876531 12665554
No 397
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=47.12 E-value=18 Score=35.35 Aligned_cols=40 Identities=25% Similarity=0.273 Sum_probs=30.1
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhh
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLL 131 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~Ll 131 (453)
..||||+|.|.+|..+.+.+. .. ++|+..|- +++.+..+.
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG---~~V~v~d~--~~~~~~~~~ 51 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SK---HEVVLQDV--SEKALEAAR 51 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TT---SEEEEECS--CHHHHHHHH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cC---CEEEEEEC--CHHHHHHHH
Confidence 358999999999999999988 64 68877764 444444444
No 398
>3au8_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; NADPH binding; HET: NDP; 1.86A {Plasmodium falciparum} PDB: 3au9_A* 3aua_A*
Probab=46.94 E-value=17 Score=38.24 Aligned_cols=114 Identities=18% Similarity=0.179 Sum_probs=61.4
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCC--CCCceEEEEcCCCChhhhhhhh-ccccceeecCceEEEecC-------CeEEE-
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRK--DSPLDVVVVNDSGGVKNASHLL-KYDSLLGTFKADVKIVDN-------ETISV- 154 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~--~~~ieiVaInd~~~~~~~a~Ll-kyDS~~G~f~~~v~~~~~-------~~l~v- 154 (453)
.||.|.| +|-||.+.|+++.... .+.|+|+|+..-.+.+.++... +|...+ +.+.++ ..|.-
T Consensus 78 k~I~ILGSTGSIGtqTLdVi~~~p~~pd~f~V~aLaAg~Nv~lL~eQ~~ef~P~~------v~v~d~~~~~~L~~~l~~~ 151 (488)
T 3au8_A 78 INVAIFGSTGSIGTNALNIIRECNKIENVFNVKALYVNKSVNELYEQAREFLPEY------LCIHDKSVYEELKELVKNI 151 (488)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHHHHSCCEEEEEEEESSCHHHHHHHHHHHCCSE------EEESCGGGTHHHHTGGGGS
T ss_pred eEEEEEccCcHHHHHHHHHHHcccCCCCeEEEEEEEcCCCHHHHHHHHHHcCCCE------EEEcCHHHHHHHHHHhhhh
Confidence 3799999 9999999999987621 1248999987654555554443 222211 111000 00000
Q ss_pred CCeEEEEEeCCC-CCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEeC
Q 012940 155 DGKLIKVVSNRD-PLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITA 208 (453)
Q Consensus 155 ~Gk~I~v~~~~d-p~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIISa 208 (453)
.|..+++....+ ..++- ....+|+|+-+.-.+....---.++++| |++.+.+
T Consensus 152 ~~~~~~v~~G~egl~e~a-~~~~~D~Vv~AIvG~aGL~PTlaAi~aG-K~IALAN 204 (488)
T 3au8_A 152 KDYKPIILCGDEGMKEIC-SSNSIDKIVIGIDSFQGLYSTMYAIMNN-KIVALAN 204 (488)
T ss_dssp TTCCCEEEEHHHHHHHHH-HCTTCCEEEECCCHHHHHHHHHHHHHTT-CEEEECC
T ss_pred cCCCceEEeCHHHHHHHh-cCCCCCEEEEccccHhHHHHHHHHHHCC-CcEEEec
Confidence 111223332111 11110 0015899999876565555555788999 5666644
No 399
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=46.82 E-value=17 Score=37.76 Aligned_cols=31 Identities=23% Similarity=0.351 Sum_probs=26.0
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
.|||+|+|.|.+|..+..+|.+.. .+|++++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G---~~V~~~d 38 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIG---HDVFCLD 38 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred CceEEEECcCHHHHHHHHHHHhCC---CEEEEEE
Confidence 369999999999999999988754 5777775
No 400
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=46.32 E-value=16 Score=35.38 Aligned_cols=34 Identities=24% Similarity=0.410 Sum_probs=25.1
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCC----CCceEEEEc
Q 012940 86 KLKVAING-FGRIGRNFLRCWHGRKD----SPLDVVVVN 119 (453)
Q Consensus 86 ~ikVaInG-fGrIGR~vlr~l~~r~~----~~ieiVaIn 119 (453)
++||.|.| .|.||+.+++.|..+.. ...+|+.+.
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D 42 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLE 42 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEe
Confidence 47999999 69999999998876531 012677664
No 401
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=46.30 E-value=17 Score=35.76 Aligned_cols=29 Identities=24% Similarity=0.312 Sum_probs=23.9
Q ss_pred eEEEEc-CChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 88 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 88 kVaInG-fGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
+|.|.| .|.||..+++++..+. .+|+++.
T Consensus 186 ~VlV~Ga~G~vG~~~~qla~~~G---a~Vi~~~ 215 (375)
T 2vn8_A 186 RVLILGASGGVGTFAIQVMKAWD---AHVTAVC 215 (375)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHhCC---CEEEEEe
Confidence 799999 8999999999887653 4777765
No 402
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=46.10 E-value=48 Score=31.91 Aligned_cols=31 Identities=19% Similarity=0.302 Sum_probs=24.9
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEcC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVND 120 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~i-eiVaInd 120 (453)
-+|.|.|.|.+||.+++.|.+.. + +|+.+|.
T Consensus 127 k~vlvlGaGg~g~aia~~L~~~G---~~~v~v~~R 158 (281)
T 3o8q_A 127 ATILLIGAGGAARGVLKPLLDQQ---PASITVTNR 158 (281)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTC---CSEEEEEES
T ss_pred CEEEEECchHHHHHHHHHHHhcC---CCeEEEEEC
Confidence 47999999999999999998753 3 5655665
No 403
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=45.98 E-value=14 Score=35.47 Aligned_cols=30 Identities=7% Similarity=0.029 Sum_probs=24.2
Q ss_pred eEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 88 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 88 kVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
+|.|.| .|.||..+++++.... .+|+++..
T Consensus 143 ~VlV~Ga~g~iG~~~~~~a~~~G---a~Vi~~~~ 173 (325)
T 3jyn_A 143 IILFHAAAGGVGSLACQWAKALG---AKLIGTVS 173 (325)
T ss_dssp EEEESSTTSHHHHHHHHHHHHHT---CEEEEEES
T ss_pred EEEEEcCCcHHHHHHHHHHHHCC---CEEEEEeC
Confidence 799999 8999999999887653 47777753
No 404
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=45.95 E-value=23 Score=34.65 Aligned_cols=29 Identities=17% Similarity=0.265 Sum_probs=23.1
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEc
Q 012940 88 KVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (453)
Q Consensus 88 kVaInGfGrIGR~vlr~l~~r~~~~i-eiVaIn 119 (453)
+|.|+|.|.||...++++.... . .|+++.
T Consensus 193 ~VlV~GaG~vG~~avqla~~~G---a~~Vi~~~ 222 (373)
T 2fzw_A 193 VCAVFGLGGVGLAVIMGCKVAG---ASRIIGVD 222 (373)
T ss_dssp EEEEECCSHHHHHHHHHHHHHT---CSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC---CCeEEEEc
Confidence 7999999999999998876542 4 677764
No 405
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=45.73 E-value=16 Score=35.59 Aligned_cols=30 Identities=17% Similarity=0.159 Sum_probs=24.2
Q ss_pred eEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 88 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 88 kVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
+|.|+| .|.||...++++..+. .+|+++..
T Consensus 153 ~VlV~gg~G~vG~~a~qla~~~G---a~Vi~~~~ 183 (346)
T 3fbg_A 153 TLLIINGAGGVGSIATQIAKAYG---LRVITTAS 183 (346)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTT---CEEEEECC
T ss_pred EEEEEcCCCHHHHHHHHHHHHcC---CEEEEEeC
Confidence 799995 9999999999887653 58887753
No 406
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=45.50 E-value=17 Score=34.30 Aligned_cols=33 Identities=27% Similarity=0.613 Sum_probs=26.3
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
|||.|-| .|.||+.+++.|.++. ...+|+++..
T Consensus 4 m~vlVTGatG~iG~~l~~~L~~~g-~~~~V~~~~r 37 (336)
T 2hun_A 4 MKLLVTGGMGFIGSNFIRYILEKH-PDWEVINIDK 37 (336)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHC-TTCEEEEEEC
T ss_pred CeEEEECCCchHHHHHHHHHHHhC-CCCEEEEEec
Confidence 5899999 8999999999998752 1368877754
No 407
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=45.47 E-value=30 Score=33.87 Aligned_cols=29 Identities=21% Similarity=0.394 Sum_probs=23.5
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEc
Q 012940 88 KVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (453)
Q Consensus 88 kVaInGfGrIGR~vlr~l~~r~~~~i-eiVaIn 119 (453)
+|.|+|.|.||...++++..+. . .|+++.
T Consensus 195 ~VlV~GaG~vG~~a~qla~~~G---a~~Vi~~~ 224 (374)
T 1cdo_A 195 TCAVFGLGAVGLAAVMGCHSAG---AKRIIAVD 224 (374)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT---CSEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHHcC---CCEEEEEc
Confidence 7999999999999999887653 4 677764
No 408
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=45.32 E-value=31 Score=34.24 Aligned_cols=29 Identities=28% Similarity=0.182 Sum_probs=23.2
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEc
Q 012940 88 KVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (453)
Q Consensus 88 kVaInGfGrIGR~vlr~l~~r~~~~i-eiVaIn 119 (453)
+|.|+|.|.||...++++..+. . .|+++.
T Consensus 188 ~VlV~GaG~vG~~aiqlak~~G---a~~Vi~~~ 217 (398)
T 2dph_A 188 HVYIAGAGPVGRCAAAGARLLG---AACVIVGD 217 (398)
T ss_dssp EEEEECCSHHHHHHHHHHHHHT---CSEEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHHcC---CCEEEEEc
Confidence 7999999999999998876542 4 677775
No 409
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=45.02 E-value=20 Score=31.38 Aligned_cols=29 Identities=21% Similarity=0.430 Sum_probs=24.1
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
|||-|.| .|.||+.+++.|. +. .+|+++.
T Consensus 4 M~vlVtGasg~iG~~~~~~l~-~g---~~V~~~~ 33 (202)
T 3d7l_A 4 MKILLIGASGTLGSAVKERLE-KK---AEVITAG 33 (202)
T ss_dssp CEEEEETTTSHHHHHHHHHHT-TT---SEEEEEE
T ss_pred cEEEEEcCCcHHHHHHHHHHH-CC---CeEEEEe
Confidence 5899999 9999999999988 63 5776664
No 410
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=44.95 E-value=21 Score=34.16 Aligned_cols=31 Identities=29% Similarity=0.302 Sum_probs=26.0
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
+||.|.| .|.||+.+++.|.++. .+|+++..
T Consensus 28 ~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 59 (352)
T 1sb8_A 28 KVWLITGVAGFIGSNLLETLLKLD---QKVVGLDN 59 (352)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred CeEEEECCCcHHHHHHHHHHHHCC---CEEEEEeC
Confidence 5899999 8999999999998764 57877754
No 411
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=44.84 E-value=21 Score=33.40 Aligned_cols=31 Identities=29% Similarity=0.559 Sum_probs=25.4
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
|||-|-| .|.||+.+++.|.++. .+|+++..
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~r 32 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARG---LEVAVLDN 32 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTT---CEEEEECC
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCC---CEEEEEEC
Confidence 3799999 8999999999998763 57777753
No 412
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=44.71 E-value=21 Score=34.03 Aligned_cols=31 Identities=32% Similarity=0.416 Sum_probs=25.9
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
++|.|.| .|.||+.+++.|.++. .+|+++..
T Consensus 22 ~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~r 53 (333)
T 2q1w_A 22 KKVFITGICGQIGSHIAELLLERG---DKVVGIDN 53 (333)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred CEEEEeCCccHHHHHHHHHHHHCC---CEEEEEEC
Confidence 4899999 9999999999998764 58877754
No 413
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=44.69 E-value=19 Score=35.34 Aligned_cols=39 Identities=18% Similarity=0.218 Sum_probs=28.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhh
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHL 130 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~L 130 (453)
.||||+|.|.+|..+...+.... ++|+..+- +++.+..+
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G---~~V~l~d~--~~~~~~~~ 45 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGG---FRVKLYDI--EPRQITGA 45 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CCEEEECS--CHHHHHHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCC---CEEEEEeC--CHHHHHHH
Confidence 48999999999999999988753 57766643 44444333
No 414
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=44.52 E-value=17 Score=35.23 Aligned_cols=31 Identities=32% Similarity=0.381 Sum_probs=23.6
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEE
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVV 118 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaI 118 (453)
++||+|.|.|.+|..++..|..... .+|+.+
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~--~~V~l~ 34 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNL--ADVVLF 34 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTC--CEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC--ceEEEE
Confidence 3699999999999999998876531 265444
No 415
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=44.42 E-value=21 Score=33.68 Aligned_cols=32 Identities=22% Similarity=0.259 Sum_probs=26.0
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
|||.|.| .|.||+.+++.|.++. ..+|+++..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~--g~~V~~~~r 33 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLRED--HYEVYGLDI 33 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHST--TCEEEEEES
T ss_pred CeEEEECCCcHHHHHHHHHHHHhC--CCEEEEEeC
Confidence 3799999 8999999999998761 258887764
No 416
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=44.15 E-value=19 Score=37.12 Aligned_cols=31 Identities=29% Similarity=0.393 Sum_probs=26.5
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
|||.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 148 m~VLVTGatG~IG~~l~~~L~~~G---~~V~~l~R 179 (516)
T 3oh8_A 148 LTVAITGSRGLVGRALTAQLQTGG---HEVIQLVR 179 (516)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC---CEEEEEEC
Confidence 6899999 9999999999998764 58877764
No 417
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=43.80 E-value=22 Score=33.55 Aligned_cols=32 Identities=25% Similarity=0.347 Sum_probs=26.4
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
+++|-|-| .|-||+.+++.|.++. .+|+++..
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~r 37 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHG---YDVVIADN 37 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTT---CEEEEECC
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCC---CcEEEEec
Confidence 46899999 8999999999998864 57777754
No 418
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=43.15 E-value=18 Score=35.28 Aligned_cols=30 Identities=23% Similarity=0.533 Sum_probs=23.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc--eEEEEc
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPL--DVVVVN 119 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~i--eiVaIn 119 (453)
|||+|.|.|.+|..++..|.... . +|+.+.
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g---~~~~V~l~D 32 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKG---FAREMVLID 32 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHT---CCSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CCCeEEEEe
Confidence 48999999999999998887642 3 665554
No 419
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=42.91 E-value=11 Score=37.50 Aligned_cols=24 Identities=29% Similarity=0.304 Sum_probs=20.6
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRK 109 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~ 109 (453)
.-||.|+|.|.+|..++..|....
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aG 141 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSG 141 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCC
Confidence 358999999999999999887643
No 420
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=42.86 E-value=17 Score=35.62 Aligned_cols=31 Identities=32% Similarity=0.374 Sum_probs=24.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
-+|.|+|.|.||..+++++..+. .+|+++..
T Consensus 182 ~~VlV~GaG~vG~~~~q~a~~~G---a~Vi~~~~ 212 (366)
T 2cdc_A 182 RKVLVVGTGPIGVLFTLLFRTYG---LEVWMANR 212 (366)
T ss_dssp CEEEEESCHHHHHHHHHHHHHHT---CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CEEEEEeC
Confidence 37999999999999999887653 47777754
No 421
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=42.56 E-value=27 Score=33.51 Aligned_cols=22 Identities=32% Similarity=0.392 Sum_probs=19.0
Q ss_pred eEEEEcCChhHHHHHHHHHhCC
Q 012940 88 KVAINGFGRIGRNFLRCWHGRK 109 (453)
Q Consensus 88 kVaInGfGrIGR~vlr~l~~r~ 109 (453)
+|.|.|.|.||...++++....
T Consensus 163 ~VlV~GaG~vG~~aiq~ak~~G 184 (346)
T 4a2c_A 163 NVIIIGAGTIGLLAIQCAVALG 184 (346)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT
T ss_pred EEEEECCCCcchHHHHHHHHcC
Confidence 7999999999999998887653
No 422
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=42.46 E-value=19 Score=37.61 Aligned_cols=35 Identities=29% Similarity=0.346 Sum_probs=28.5
Q ss_pred ccceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 83 TVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 83 ~~m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
..++.+|.|.|+|++|+.+++.|.+.. .+++.|..
T Consensus 124 ~~~~~hviI~G~g~~g~~la~~L~~~~---~~vvvid~ 158 (565)
T 4gx0_A 124 DDTRGHILIFGIDPITRTLIRKLESRN---HLFVVVTD 158 (565)
T ss_dssp TTCCSCEEEESCCHHHHHHHHHTTTTT---CCEEEEES
T ss_pred cccCCeEEEECCChHHHHHHHHHHHCC---CCEEEEEC
Confidence 345678999999999999999987653 68888864
No 423
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=42.42 E-value=28 Score=33.18 Aligned_cols=30 Identities=23% Similarity=0.389 Sum_probs=24.1
Q ss_pred eEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 88 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 88 kVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
+|.|.| .|.||...++++..+. .+|+++..
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~G---a~Vi~~~~ 179 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLG---YQVAAVSG 179 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT---CCEEEEES
T ss_pred eEEEECCCcHHHHHHHHHHHHcC---CEEEEEeC
Confidence 499999 5999999999887653 47877754
No 424
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=42.34 E-value=19 Score=37.55 Aligned_cols=30 Identities=20% Similarity=0.296 Sum_probs=24.9
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
.||||+|.|.+|..+...+.... ++|+..+
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG---~~V~l~D 35 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHG---HQVLLYD 35 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTT---CCEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHCC---CeEEEEE
Confidence 38999999999999999988753 5776665
No 425
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=41.87 E-value=21 Score=34.19 Aligned_cols=33 Identities=24% Similarity=0.478 Sum_probs=25.9
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcCC
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd~ 121 (453)
++|.|.| .|.||+.+++.|.++. ..+|+++...
T Consensus 47 ~~vlVtGatG~iG~~l~~~L~~~g--~~~V~~~~r~ 80 (357)
T 2x6t_A 47 RMIIVTGGAGFIGSNIVKALNDKG--ITDILVVDNL 80 (357)
T ss_dssp -CEEEETTTSHHHHHHHHHHHHTT--CCCEEEEECC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC--CcEEEEEecC
Confidence 5899999 8999999999998763 1477777643
No 426
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=41.80 E-value=19 Score=34.19 Aligned_cols=33 Identities=24% Similarity=0.457 Sum_probs=26.2
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
+||.|.| .|.||+.+++.|.++. +..+|+++..
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~-~g~~V~~~~r 38 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNH-PDVHVTVLDK 38 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHC-TTCEEEEEEC
T ss_pred cEEEEeCCccHHHHHHHHHHHHhC-CCCEEEEEeC
Confidence 5899999 9999999999998751 1358877754
No 427
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=41.78 E-value=24 Score=33.88 Aligned_cols=31 Identities=19% Similarity=0.261 Sum_probs=25.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
|||+|+|-|..|-.+...|..+. ++++.+..
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G---~~v~v~Er 32 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHG---IKVTIYER 32 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHhCC---CCEEEEec
Confidence 69999999999999988887653 67777743
No 428
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=41.53 E-value=25 Score=33.28 Aligned_cols=34 Identities=24% Similarity=0.458 Sum_probs=26.0
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCC---ceEEEEcC
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSP---LDVVVVND 120 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~---ieiVaInd 120 (453)
|||.|-| .|.||+.+++.|.++..+. .+|+++..
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r 38 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDS 38 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEEC
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEEC
Confidence 4899999 8999999999998741123 58877754
No 429
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=41.43 E-value=38 Score=33.27 Aligned_cols=30 Identities=7% Similarity=-0.086 Sum_probs=24.0
Q ss_pred eeEEEEcC-ChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 87 LKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 87 ikVaInGf-GrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
-+|.|+|- |.||...++++..+. .+++++.
T Consensus 166 ~~VlV~Ga~G~vG~~a~qla~~~G---a~Vi~~~ 196 (371)
T 3gqv_A 166 VYVLVYGGSTATATVTMQMLRLSG---YIPIATC 196 (371)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred cEEEEECCCcHHHHHHHHHHHHCC---CEEEEEe
Confidence 37999995 999999999887653 4777774
No 430
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=41.15 E-value=25 Score=32.74 Aligned_cols=33 Identities=21% Similarity=0.133 Sum_probs=27.1
Q ss_pred ceeeEEEEcCCh---------hHHHHHHHHHhCCCCCceEEEEcC
Q 012940 85 AKLKVAINGFGR---------IGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 85 m~ikVaInGfGr---------IGR~vlr~l~~r~~~~ieiVaInd 120 (453)
|++||+|.|-|. -|+.+++++.++. ++++.++.
T Consensus 1 m~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G---~~v~~~~~ 42 (306)
T 1iow_A 1 MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGG---IDAYPVDP 42 (306)
T ss_dssp CCCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTT---CEEEEECT
T ss_pred CCcEEEEEeCCCCccceEcHHhHHHHHHHHHHCC---CeEEEEec
Confidence 678999999887 7899999998764 68877763
No 431
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=40.63 E-value=41 Score=35.03 Aligned_cols=31 Identities=26% Similarity=0.402 Sum_probs=25.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
.||||+|.|.+|..+...+.... ++|+.++-
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG---~~V~l~D~ 85 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAG---IETFLVVR 85 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CeEEEEEC
Confidence 58999999999999999988653 68777653
No 432
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=40.33 E-value=26 Score=33.09 Aligned_cols=30 Identities=23% Similarity=0.395 Sum_probs=25.0
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
|||-|-| .|.||+.+++.|.++. .+|+++.
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~ 31 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNG---HDVIILD 31 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC---CEEEEEe
Confidence 3799999 8999999999998764 5777774
No 433
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=40.10 E-value=29 Score=33.93 Aligned_cols=33 Identities=21% Similarity=0.360 Sum_probs=27.3
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 85 m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
+++||.|.|-|..||.+++++.+.. ++++++..
T Consensus 10 ~~~~ili~g~g~~~~~~~~a~~~~G---~~v~~~~~ 42 (391)
T 1kjq_A 10 AATRVMLLGSGELGKEVAIECQRLG---VEVIAVDR 42 (391)
T ss_dssp TCCEEEEESCSHHHHHHHHHHHTTT---CEEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcC---CEEEEEEC
Confidence 4569999999999999999997653 68888864
No 434
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=39.95 E-value=27 Score=33.91 Aligned_cols=31 Identities=19% Similarity=0.278 Sum_probs=26.1
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
+||.|-| +|.||+.+++.|.++. .+|+++..
T Consensus 12 ~~vlVTG~tGfIG~~l~~~L~~~G---~~V~~~~r 43 (404)
T 1i24_A 12 SRVMVIGGDGYCGWATALHLSKKN---YEVCIVDN 43 (404)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEEC
T ss_pred CeEEEeCCCcHHHHHHHHHHHhCC---CeEEEEEe
Confidence 5899999 9999999999998764 58877743
No 435
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=39.75 E-value=88 Score=31.15 Aligned_cols=36 Identities=17% Similarity=0.131 Sum_probs=27.9
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCC
Q 012940 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (453)
Q Consensus 85 m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~ 121 (453)
|.-||.|+|-|.-|-.+++.|..+. ++.+|+-|++.
T Consensus 1 M~K~VvIIGgG~aGl~aA~~L~~~~-~~~~VtlI~~~ 36 (430)
T 3hyw_A 1 MAKHVVVIGGGVGGIATAYNLRNLM-PDLKITLISDR 36 (430)
T ss_dssp -CCEEEEECSSHHHHHHHHHHHHHC-TTCEEEEECSS
T ss_pred CCCcEEEECCCHHHHHHHHHHhccC-cCCeEEEEcCC
Confidence 5448999999999999988886542 46898888763
No 436
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=39.46 E-value=35 Score=32.62 Aligned_cols=29 Identities=17% Similarity=0.229 Sum_probs=23.9
Q ss_pred eEEEEc-CChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 88 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 88 kVaInG-fGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
+|.|+| .|.||...++++.... .+++++.
T Consensus 155 ~vlV~Ga~G~vG~~a~q~a~~~G---a~vi~~~ 184 (321)
T 3tqh_A 155 VVLIHAGAGGVGHLAIQLAKQKG---TTVITTA 184 (321)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred EEEEEcCCcHHHHHHHHHHHHcC---CEEEEEe
Confidence 799998 9999999999887653 4777774
No 437
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=39.29 E-value=23 Score=33.78 Aligned_cols=32 Identities=28% Similarity=0.401 Sum_probs=25.6
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
|||.|-| .|.||+.+++.|.++ +..+|+++..
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~--~g~~V~~~~r 33 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKN--TQDTVVNIDK 33 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHH--CSCEEEEEEC
T ss_pred CEEEEECCCchHhHHHHHHHHhc--CCCeEEEEec
Confidence 4799999 899999999999874 1357877754
No 438
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=38.76 E-value=27 Score=33.95 Aligned_cols=32 Identities=25% Similarity=0.318 Sum_probs=26.2
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
+||.|.| .|.||+.+++.|.++. ..+|+++..
T Consensus 33 ~~ilVtGatG~iG~~l~~~L~~~g--~~~V~~~~r 65 (377)
T 2q1s_A 33 TNVMVVGGAGFVGSNLVKRLLELG--VNQVHVVDN 65 (377)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT--CSEEEEECC
T ss_pred CEEEEECCccHHHHHHHHHHHHcC--CceEEEEEC
Confidence 4899999 8999999999998763 158887754
No 439
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=38.76 E-value=28 Score=33.91 Aligned_cols=29 Identities=21% Similarity=0.226 Sum_probs=23.9
Q ss_pred eEEEEc-CChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 88 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 88 kVaInG-fGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
+|.|+| .|.||..+++++..+. .+|+++.
T Consensus 170 ~VlV~Gg~g~iG~~~~~~a~~~G---a~Vi~~~ 199 (353)
T 4dup_A 170 SVLIHGGTSGIGTTAIQLARAFG---AEVYATA 199 (353)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred EEEEEcCCCHHHHHHHHHHHHcC---CEEEEEe
Confidence 799995 9999999999887663 5777775
No 440
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=38.24 E-value=29 Score=33.47 Aligned_cols=29 Identities=28% Similarity=0.345 Sum_probs=23.0
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc--eEEEE
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPL--DVVVV 118 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~i--eiVaI 118 (453)
+||+|.|.|.+|..++..|.... + +|+-+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g---~~~eV~L~ 31 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRG---SCSELVLV 31 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CCSEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CCCEEEEE
Confidence 48999999999999998887653 3 55555
No 441
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=38.17 E-value=31 Score=32.71 Aligned_cols=31 Identities=23% Similarity=0.701 Sum_probs=25.8
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
++|.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 21 ~~vlVTGasG~iG~~l~~~L~~~g---~~V~~~~r 52 (330)
T 2pzm_A 21 MRILITGGAGCLGSNLIEHWLPQG---HEILVIDN 52 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHGGGT---CEEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC---CEEEEEEC
Confidence 5899999 8999999999998763 57777754
No 442
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=38.17 E-value=50 Score=31.79 Aligned_cols=31 Identities=6% Similarity=-0.078 Sum_probs=24.4
Q ss_pred eeEEEEcC-ChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInGf-GrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
-+|.|.|. |.||+.+++++..+. .+|+++..
T Consensus 168 ~~vlV~Gasg~iG~~~~~~a~~~G---~~Vi~~~~ 199 (343)
T 2eih_A 168 DDVLVMAAGSGVSVAAIQIAKLFG---ARVIATAG 199 (343)
T ss_dssp CEEEECSTTSTTHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCchHHHHHHHHHHHCC---CEEEEEeC
Confidence 37999995 999999999887653 47777653
No 443
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=37.45 E-value=31 Score=32.37 Aligned_cols=31 Identities=13% Similarity=0.079 Sum_probs=25.9
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
++|.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 12 ~~vlVTGatG~iG~~l~~~L~~~g---~~V~~~~r 43 (342)
T 1y1p_A 12 SLVLVTGANGFVASHVVEQLLEHG---YKVRGTAR 43 (342)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCccHHHHHHHHHHHHCC---CEEEEEeC
Confidence 5899999 8999999999998764 57777754
No 444
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=37.41 E-value=31 Score=33.82 Aligned_cols=25 Identities=24% Similarity=0.375 Sum_probs=21.4
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCC
Q 012940 85 AKLKVAINGFGRIGRNFLRCWHGRK 109 (453)
Q Consensus 85 m~ikVaInGfGrIGR~vlr~l~~r~ 109 (453)
|++||+|.|.|.+|..++..+....
T Consensus 13 ~~~kI~ViGaG~vG~~iA~~la~~g 37 (328)
T 2hjr_A 13 MRKKISIIGAGQIGSTIALLLGQKD 37 (328)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCC
Confidence 4569999999999999998887653
No 445
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=37.26 E-value=20 Score=34.85 Aligned_cols=23 Identities=13% Similarity=0.128 Sum_probs=20.0
Q ss_pred eeeEEEEcCChhHHHHHHHHHhC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGR 108 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r 108 (453)
..+|+|+|+|.+|+.+++.|...
T Consensus 135 ~~~igiIG~G~~g~~~a~~l~~~ 157 (312)
T 2i99_A 135 SEVLCILGAGVQAYSHYEIFTEQ 157 (312)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH
T ss_pred CcEEEEECCcHHHHHHHHHHHHh
Confidence 35899999999999999988753
No 446
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=37.07 E-value=32 Score=32.13 Aligned_cols=31 Identities=16% Similarity=0.358 Sum_probs=25.8
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
++|-|-| .|.||+.+++.|.++. .+|+++..
T Consensus 13 ~~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~r 44 (321)
T 2pk3_A 13 MRALITGVAGFVGKYLANHLTEQN---VEVFGTSR 44 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred ceEEEECCCChHHHHHHHHHHHCC---CEEEEEec
Confidence 4899999 9999999999998763 58777754
No 447
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=36.88 E-value=19 Score=34.88 Aligned_cols=35 Identities=23% Similarity=0.300 Sum_probs=26.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhh
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNA 127 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~ 127 (453)
.+|.|.|+|++|+.+++.|.++. . +++|.. +++.+
T Consensus 116 ~~viI~G~G~~g~~l~~~L~~~g---~-v~vid~--~~~~~ 150 (336)
T 1lnq_A 116 RHVVICGWSESTLECLRELRGSE---V-FVLAED--ENVRK 150 (336)
T ss_dssp CEEEEESCCHHHHHHHTTGGGSC---E-EEEESC--GGGHH
T ss_pred CCEEEECCcHHHHHHHHHHHhCC---c-EEEEeC--Chhhh
Confidence 47999999999999999887652 5 777743 44444
No 448
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=36.48 E-value=33 Score=32.45 Aligned_cols=23 Identities=26% Similarity=0.426 Sum_probs=20.5
Q ss_pred eeeEEEEc-CChhHHHHHHHHHhC
Q 012940 86 KLKVAING-FGRIGRNFLRCWHGR 108 (453)
Q Consensus 86 ~ikVaInG-fGrIGR~vlr~l~~r 108 (453)
.++|.|-| .|.||+.+++.|.++
T Consensus 14 ~~~vlVtGa~G~iG~~l~~~L~~~ 37 (342)
T 2hrz_A 14 GMHIAIIGAAGMVGRKLTQRLVKD 37 (342)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHhc
Confidence 46899999 899999999999875
No 449
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=36.39 E-value=20 Score=35.21 Aligned_cols=22 Identities=32% Similarity=0.471 Sum_probs=19.5
Q ss_pred eeEEEEc-CChhHHHHHHHHHhC
Q 012940 87 LKVAING-FGRIGRNFLRCWHGR 108 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r 108 (453)
|||+|.| .|.||..++..|..+
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~ 23 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQ 23 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhC
Confidence 5899999 999999999888764
No 450
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=36.32 E-value=35 Score=34.09 Aligned_cols=33 Identities=21% Similarity=0.327 Sum_probs=27.6
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 85 m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
+++||.|.|-|.+|+.+++++.++. ++++++..
T Consensus 18 ~~~~ili~g~g~~g~~~~~a~~~~G---~~v~~v~~ 50 (433)
T 2dwc_A 18 SAQKILLLGSGELGKEIAIEAQRLG---VEVVAVDR 50 (433)
T ss_dssp TCCEEEEESCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC---CEEEEEEC
Confidence 4469999999999999999998753 68888864
No 451
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=36.26 E-value=30 Score=36.12 Aligned_cols=33 Identities=15% Similarity=0.200 Sum_probs=26.6
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~i-eiVaInd 120 (453)
.+||+|.|.|.+|..+...|.+. +.. +|+.++-
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~--~G~~~V~~~D~ 51 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADA--PCFEKVLGFQR 51 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHS--TTCCEEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHHh--CCCCeEEEEEC
Confidence 36999999999999999998875 236 8877753
No 452
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=36.23 E-value=34 Score=32.14 Aligned_cols=31 Identities=16% Similarity=0.219 Sum_probs=26.0
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
++|.|-| .|.||+.+++.|.++. .+|+++..
T Consensus 4 ~~vlVtGatG~iG~~l~~~L~~~G---~~V~~~~r 35 (345)
T 2z1m_A 4 KRALITGIRGQDGAYLAKLLLEKG---YEVYGADR 35 (345)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred CEEEEECCCChHHHHHHHHHHHCC---CEEEEEEC
Confidence 5899999 8999999999998763 58877754
No 453
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=36.03 E-value=33 Score=32.71 Aligned_cols=31 Identities=16% Similarity=-0.005 Sum_probs=26.1
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
++|.|.| .|.||+.+++.|.++. .+|+++..
T Consensus 10 ~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 41 (357)
T 1rkx_A 10 KRVFVTGHTGFKGGWLSLWLQTMG---ATVKGYSL 41 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCchHHHHHHHHHHhCC---CeEEEEeC
Confidence 5899999 8999999999998763 57777754
No 454
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=35.81 E-value=36 Score=32.70 Aligned_cols=32 Identities=28% Similarity=0.452 Sum_probs=26.6
Q ss_pred eeeEEEEc-CChhHHHHHHHHHh--CCCCCceEEEEcC
Q 012940 86 KLKVAING-FGRIGRNFLRCWHG--RKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInG-fGrIGR~vlr~l~~--r~~~~ieiVaInd 120 (453)
.+||-|-| .|-||+.+++.|.+ +. .+|+++..
T Consensus 10 ~~~vlVTGatG~IG~~l~~~L~~~~~g---~~V~~~~r 44 (362)
T 3sxp_A 10 NQTILITGGAGFVGSNLAFHFQENHPK---AKVVVLDK 44 (362)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCTT---SEEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCC---CeEEEEEC
Confidence 35899999 99999999999987 53 58888754
No 455
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=35.66 E-value=32 Score=31.84 Aligned_cols=32 Identities=25% Similarity=0.515 Sum_probs=25.2
Q ss_pred eEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcCC
Q 012940 88 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (453)
Q Consensus 88 kVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd~ 121 (453)
||.|.| .|.||+.+++.|.++. ..+|+++...
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g--~~~V~~~~r~ 33 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKG--ITDILVVDNL 33 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTT--CCCEEEEECC
T ss_pred CEEEEcCccHHHHHHHHHHHHCC--CcEEEEEccC
Confidence 588999 8999999999998763 1477777643
No 456
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=35.62 E-value=28 Score=33.93 Aligned_cols=32 Identities=16% Similarity=0.330 Sum_probs=23.4
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEE
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVV 118 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaI 118 (453)
++||+|.|.|.||..++..|..+.. --+|+.+
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~-~~ev~l~ 37 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGI-ADEIVLI 37 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTC-CSEEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCC-CCEEEEE
Confidence 4699999999999999988765421 1155555
No 457
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=35.46 E-value=35 Score=32.61 Aligned_cols=31 Identities=16% Similarity=0.177 Sum_probs=25.7
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
++|-|-| .|.||+.+++.|.++. .+|+++..
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g---~~V~~~~r 33 (372)
T 1db3_A 2 KVALITGVTGQDGSYLAEFLLEKG---YEVHGIKR 33 (372)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHHCC---CEEEEEEC
Confidence 4799999 8999999999998763 57777754
No 458
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=35.31 E-value=20 Score=33.02 Aligned_cols=32 Identities=13% Similarity=0.355 Sum_probs=25.4
Q ss_pred eEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 88 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 88 kVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
||.|.| +|.||+.+++.|.++. +..+|+++..
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~-~g~~V~~~~r 34 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKKV-PASQIIAIVR 34 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTTS-CGGGEEEEES
T ss_pred eEEEEcCCchHHHHHHHHHHHhC-CCCeEEEEEc
Confidence 789999 8999999999998651 2368877764
No 459
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=35.23 E-value=27 Score=32.64 Aligned_cols=30 Identities=20% Similarity=0.442 Sum_probs=23.7
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
+||-|-| .|.||+.+++.|.++. .+|++..
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g----~~v~~~~ 32 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN----EIVVIDN 32 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS----CEEEECC
T ss_pred CEEEEECCCchHHHHHHHHHHhCC----CEEEEEc
Confidence 4899999 8999999999998652 5666644
No 460
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=35.21 E-value=36 Score=33.21 Aligned_cols=33 Identities=15% Similarity=0.015 Sum_probs=24.8
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~ 121 (453)
.+|+|.|.|.+|+.++++|.+.. .++.|.|-+.
T Consensus 126 ~~v~iIGaG~~a~~~~~al~~~~--~~~~V~v~~r 158 (322)
T 1omo_A 126 SVFGFIGCGTQAYFQLEALRRVF--DIGEVKAYDV 158 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHS--CCCEEEEECS
T ss_pred CEEEEEcCcHHHHHHHHHHHHhC--CccEEEEECC
Confidence 58999999999999999987631 2455555554
No 461
>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}
Probab=35.17 E-value=28 Score=31.59 Aligned_cols=30 Identities=23% Similarity=0.473 Sum_probs=24.0
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
|||.|.| .|.||+.+++.|.+ . .+|+++..
T Consensus 1 m~ilVtGatG~iG~~l~~~L~~-g---~~V~~~~r 31 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLSE-R---HEVIKVYN 31 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHTT-T---SCEEEEES
T ss_pred CEEEEECCCChhHHHHHHHHhc-C---CeEEEecC
Confidence 3799999 89999999999874 2 57776653
No 462
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=35.03 E-value=24 Score=33.60 Aligned_cols=34 Identities=24% Similarity=0.205 Sum_probs=25.8
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCC--CCceEEEEcC
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKD--SPLDVVVVND 120 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~--~~ieiVaInd 120 (453)
+||.|.| +|.||+.+++.|.++.. ...+|+++..
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r 38 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVAR 38 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEES
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeC
Confidence 5899999 89999999999876520 0157777754
No 463
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=34.77 E-value=37 Score=32.89 Aligned_cols=31 Identities=32% Similarity=0.607 Sum_probs=25.8
Q ss_pred eeEEEEc-CChhHHHHHHHHH-hCCCCCceEEEEcC
Q 012940 87 LKVAING-FGRIGRNFLRCWH-GRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~-~r~~~~ieiVaInd 120 (453)
|||-|-| .|.||+.+++.|. ++. .+|+++..
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~~g---~~V~~~~r 35 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRDTN---HSVVIVDS 35 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCC---CEEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHhCC---CEEEEEec
Confidence 4899999 8999999999998 764 57877754
No 464
>1o9a_B FNBB, fibronectin binding protein; cell adhesion/complex, HOST-pathogen protein complex, cell adhesion; NMR {Streptococcus dysgalactiae}
Probab=34.76 E-value=6.4 Score=26.42 Aligned_cols=21 Identities=33% Similarity=0.523 Sum_probs=15.3
Q ss_pred CCceecCCeEEEEEEecCCCc
Q 012940 387 LTMVMGDDMVKVVAWYDNEWG 407 (453)
Q Consensus 387 ~t~v~~~~~vKl~~WYDNE~G 407 (453)
+|..+.+..-||..-|||||-
T Consensus 13 sttevedskpk~sihfdnewp 33 (36)
T 1o9a_B 13 STTEVEDSKPKLSIHFDNEWP 33 (36)
T ss_dssp CCBCCCCSCCCCBCCCCCCCS
T ss_pred CceeeecCCcceEEeccCcCC
Confidence 344555667788888999994
No 465
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=34.75 E-value=36 Score=33.61 Aligned_cols=30 Identities=33% Similarity=0.434 Sum_probs=23.7
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCc-eEEEE
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVV 118 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~i-eiVaI 118 (453)
++||+|.|.|.+|..++..|.... + +|+-+
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~---~~~v~L~ 37 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKE---LGDVVLF 37 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCC---CCeEEEE
Confidence 359999999999999998887653 3 65544
No 466
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=34.70 E-value=34 Score=35.20 Aligned_cols=30 Identities=27% Similarity=0.467 Sum_probs=24.9
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
.||||+|.|.+|..+...|.... ++|+.++
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G---~~V~l~D 67 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVG---ISVVAVE 67 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT---CEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhCC---CeEEEEE
Confidence 48999999999999999887653 6877664
No 467
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=34.68 E-value=38 Score=34.04 Aligned_cols=30 Identities=23% Similarity=0.068 Sum_probs=23.8
Q ss_pred eeEEEEc-CChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 87 LKVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 87 ikVaInG-fGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
-+|.|.| .|.||...++++.... .+++++.
T Consensus 222 ~~VlV~GasG~iG~~a~qla~~~G---a~vi~~~ 252 (447)
T 4a0s_A 222 DIVLIWGASGGLGSYAIQFVKNGG---GIPVAVV 252 (447)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTT---CEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHcC---CEEEEEe
Confidence 3799999 5999999999887653 4777664
No 468
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=34.46 E-value=18 Score=34.77 Aligned_cols=30 Identities=27% Similarity=0.383 Sum_probs=23.5
Q ss_pred eEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 88 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 88 kVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
+|.|.| .|.||...++++..+. .+++++..
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~G---a~vi~~~~ 183 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRG---YDVVASTG 183 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHT---CCEEEEES
T ss_pred eEEEECCCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 699999 5999999999887653 46777654
No 469
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=34.44 E-value=29 Score=34.29 Aligned_cols=32 Identities=25% Similarity=0.345 Sum_probs=24.1
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEc
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVN 119 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~i-eiVaIn 119 (453)
.+||+|.|.|.||..++..|..+.. + +|+.+.
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~--~~~l~l~D 37 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGI--TDELVVID 37 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTC--CSEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC--CceEEEEe
Confidence 3699999999999999998876531 2 555553
No 470
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=34.23 E-value=42 Score=30.52 Aligned_cols=33 Identities=18% Similarity=0.167 Sum_probs=26.5
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 85 m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
|+.+|.|+|-|..|-..+..|..+. ++|+-|..
T Consensus 1 m~~~vvIIG~G~aGl~aA~~l~~~g---~~v~lie~ 33 (297)
T 3fbs_A 1 MKFDVIIIGGSYAGLSAALQLGRAR---KNILLVDA 33 (297)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTT---CCEEEEEC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCC---CCEEEEeC
Confidence 5679999999999999998887653 56666753
No 471
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=33.78 E-value=29 Score=36.91 Aligned_cols=22 Identities=14% Similarity=0.291 Sum_probs=19.6
Q ss_pred eeEEEEcCChhHHHHHHHHHhC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGR 108 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r 108 (453)
.||||+|+|.+|+.+++.|...
T Consensus 55 KkIgIIGlGsMG~AmA~nLr~s 76 (525)
T 3fr7_A 55 KQIGVIGWGSQGPAQAQNLRDS 76 (525)
T ss_dssp SEEEEECCTTHHHHHHHHHHHH
T ss_pred CEEEEEeEhHHHHHHHHHHHhc
Confidence 3899999999999999988764
No 472
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=33.75 E-value=35 Score=31.98 Aligned_cols=33 Identities=18% Similarity=0.221 Sum_probs=26.1
Q ss_pred ceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 85 AKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 85 m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
|+.+|.|+|-|.+|-.++..|..+. ++|+.+..
T Consensus 1 m~~dV~IIGaG~~Gl~~A~~L~~~G---~~V~vlE~ 33 (336)
T 1yvv_A 1 MTVPIAIIGTGIAGLSAAQALTAAG---HQVHLFDK 33 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTT---CCEEEECS
T ss_pred CCceEEEECCcHHHHHHHHHHHHCC---CcEEEEEC
Confidence 4568999999999999999888753 67777754
No 473
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=33.62 E-value=39 Score=33.13 Aligned_cols=29 Identities=34% Similarity=0.386 Sum_probs=23.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc-eEEEE
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVV 118 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~i-eiVaI 118 (453)
.||+|.|.|.+|..++..+..+. + +|+-+
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~g---~~~v~l~ 38 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQKE---LADVVLV 38 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CCeEEEE
Confidence 58999999999999998887653 4 55544
No 474
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=33.46 E-value=42 Score=32.14 Aligned_cols=30 Identities=17% Similarity=0.114 Sum_probs=24.3
Q ss_pred eEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 88 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 88 kVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
+|.|.| .|.||+.+++.+..+. .+|+++..
T Consensus 148 ~vlV~Ga~ggiG~~~~~~a~~~G---~~Vi~~~~ 178 (333)
T 1wly_A 148 YVLIHAAAGGMGHIMVPWARHLG---ATVIGTVS 178 (333)
T ss_dssp EEEETTTTSTTHHHHHHHHHHTT---CEEEEEES
T ss_pred EEEEECCccHHHHHHHHHHHHCC---CEEEEEeC
Confidence 799999 7999999999887663 47777653
No 475
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=33.45 E-value=36 Score=33.25 Aligned_cols=23 Identities=35% Similarity=0.288 Sum_probs=20.2
Q ss_pred eeeEEEEcCChhHHHHHHHHHhC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGR 108 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r 108 (453)
++||+|.|.|.||..++-.|..+
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~ 29 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALR 29 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC
Confidence 47999999999999998888765
No 476
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=33.32 E-value=38 Score=33.48 Aligned_cols=31 Identities=26% Similarity=0.205 Sum_probs=25.7
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
-+|.|.|.|.||+.+++.+.... .+|++++.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~G---a~V~v~dr 198 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLG---AQVQIFDI 198 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCC---CEEEEEeC
Confidence 58999999999999999998763 47777764
No 477
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=33.24 E-value=32 Score=34.44 Aligned_cols=37 Identities=24% Similarity=0.338 Sum_probs=26.2
Q ss_pred ccccceeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 81 KETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 81 ~~~~m~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
....|+.+|.|+|-|..|-.+...|..+. ++|+.|..
T Consensus 17 ~~~~m~~~ViIVGaGpaGl~~A~~La~~G---~~V~viE~ 53 (430)
T 3ihm_A 17 RGSHMKKRIGIVGAGTAGLHLGLFLRQHD---VDVTVYTD 53 (430)
T ss_dssp ------CEEEEECCHHHHHHHHHHHHHTT---CEEEEEES
T ss_pred ccCcCCCCEEEECCcHHHHHHHHHHHHCC---CeEEEEcC
Confidence 34457779999999999999998888763 68777764
No 478
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=33.19 E-value=41 Score=33.03 Aligned_cols=32 Identities=25% Similarity=0.321 Sum_probs=24.3
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
.+||+|.|.|.||..++..|..+.. .+|+-+.
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~--~~v~l~D 36 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQL--GDVVLFD 36 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC--CEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC--ceEEEEe
Confidence 3699999999999999988876532 1655553
No 479
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=32.71 E-value=41 Score=32.59 Aligned_cols=30 Identities=17% Similarity=0.119 Sum_probs=26.0
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 88 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 88 kVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
||+|.|-|.-|+.+.+++.+.. +++++++.
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~G---~~vv~vd~ 32 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKAG---MKVVLVDK 32 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 8999999999999999887653 79999964
No 480
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=32.31 E-value=20 Score=34.66 Aligned_cols=30 Identities=17% Similarity=0.242 Sum_probs=23.4
Q ss_pred eEEEEcC-ChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 88 KVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 88 kVaInGf-GrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
+|.|.|. |.||..+++++.... .+|+++..
T Consensus 147 ~VlV~Ga~g~iG~~~~~~a~~~G---a~Vi~~~~ 177 (340)
T 3gms_A 147 VLLVNACGSAIGHLFAQLSQILN---FRLIAVTR 177 (340)
T ss_dssp EEEESSTTSHHHHHHHHHHHHHT---CEEEEEES
T ss_pred EEEEeCCccHHHHHHHHHHHHcC---CEEEEEeC
Confidence 7999995 599999998887653 47777753
No 481
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=31.86 E-value=47 Score=32.05 Aligned_cols=32 Identities=16% Similarity=0.332 Sum_probs=24.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
|||+|.|.|.+|..++..|..... ..+|+.+.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~-g~~V~l~D 32 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQL-ARELVLLD 32 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-CSEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-CCEEEEEe
Confidence 489999999999999988876421 24666553
No 482
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=31.83 E-value=44 Score=32.67 Aligned_cols=32 Identities=28% Similarity=0.252 Sum_probs=24.1
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDS 121 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~ 121 (453)
+||+|.|.|.+|..+...|..+.. ++ |.+-|.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~--~~-v~L~Di 36 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNL--GD-VVLFDI 36 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC--CE-EEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC--Ce-EEEEeC
Confidence 599999999999999988887532 36 444444
No 483
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=31.73 E-value=1.3e+02 Score=29.87 Aligned_cols=73 Identities=21% Similarity=0.228 Sum_probs=0.0
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCce-EEEEcCCCChhhhhhhhccccceeecCceEEEe--cCCeEEECCeEEEEEeC
Q 012940 88 KVAINGFGRIGRNFLRCWHGRKDSPLD-VVVVNDSGGVKNASHLLKYDSLLGTFKADVKIV--DNETISVDGKLIKVVSN 164 (453)
Q Consensus 88 kVaInGfGrIGR~vlr~l~~r~~~~ie-iVaInd~~~~~~~a~LlkyDS~~G~f~~~v~~~--~~~~l~v~Gk~I~v~~~ 164 (453)
+|.|+|-|.+|-.++..|..... + |.-+.....+ ++..-+. ....++.. +++.+.+.+....+
T Consensus 214 ~VvVvG~G~sg~e~A~~l~~~~~---~~V~l~~r~~~~------l~~~~i~--~~~~v~~~~~~~~~v~~~dG~~~~--- 279 (447)
T 2gv8_A 214 SVLVVGGASSANDLVRHLTPVAK---HPIYQSLLGGGD------IQNESLQ--QVPEITKFDPTTREIYLKGGKVLS--- 279 (447)
T ss_dssp CEEEECSSHHHHHHHHHHTTTSC---SSEEEECTTCCS------CBCSSEE--EECCEEEEETTTTEEEETTTEEEC---
T ss_pred EEEEEccCcCHHHHHHHHHHHhC---CcEEEEeCCCCc------CCCCCeE--EecCeEEEecCCCEEEECCCCEec---
Q ss_pred CCCCCCCccccCccEEEcCCC
Q 012940 165 RDPLQLPWAELGIDIVIEGTG 185 (453)
Q Consensus 165 ~dp~~l~W~~~gvDiVie~TG 185 (453)
.+|.||.|||
T Consensus 280 -----------~~D~vi~atG 289 (447)
T 2gv8_A 280 -----------NIDRVIYCTG 289 (447)
T ss_dssp -----------CCSEEEECCC
T ss_pred -----------cCCEEEECCC
No 484
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=31.70 E-value=2.5e+02 Score=25.89 Aligned_cols=30 Identities=20% Similarity=0.052 Sum_probs=22.9
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
-+|+|+|-|.+|-.++..|..+. .+|.-+.
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~g---~~Vtlv~ 182 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKFA---DEVTVIH 182 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTC---SEEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhcC---CEEEEEe
Confidence 48999999999999988886553 3555554
No 485
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=31.69 E-value=41 Score=33.26 Aligned_cols=28 Identities=25% Similarity=0.387 Sum_probs=22.8
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCceEEEE
Q 012940 88 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVV 118 (453)
Q Consensus 88 kVaInGfGrIGR~vlr~l~~r~~~~ieiVaI 118 (453)
||||+|.|.+|+.++..+.... ++|+..
T Consensus 8 ~VaViGaG~MG~giA~~~a~~G---~~V~l~ 35 (319)
T 3ado_A 8 DVLIVGSGLVGRSWAMLFASGG---FRVKLY 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT---CCEEEE
T ss_pred eEEEECCcHHHHHHHHHHHhCC---CeEEEE
Confidence 8999999999999998887653 575544
No 486
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=31.13 E-value=46 Score=30.98 Aligned_cols=29 Identities=17% Similarity=0.288 Sum_probs=24.4
Q ss_pred eEEEEc-CChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 88 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 88 kVaInG-fGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
||.|-| .|.||+.+++.|.++. .+|+++.
T Consensus 3 ~vlVTGatG~iG~~l~~~L~~~G---~~V~~~~ 32 (322)
T 2p4h_X 3 RVCVTGGTGFLGSWIIKSLLENG---YSVNTTI 32 (322)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTT---CEEEEEC
T ss_pred EEEEECChhHHHHHHHHHHHHCC---CEEEEEE
Confidence 799999 8999999999998764 5777664
No 487
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=31.11 E-value=36 Score=33.10 Aligned_cols=22 Identities=23% Similarity=0.274 Sum_probs=19.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGR 108 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r 108 (453)
|||+|.|.|.+|..++..|..+
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~ 22 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLN 22 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC
Confidence 5899999999999999888764
No 488
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=31.07 E-value=48 Score=32.67 Aligned_cols=29 Identities=7% Similarity=0.141 Sum_probs=23.1
Q ss_pred eEEEE--cCChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 88 KVAIN--GFGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 88 kVaIn--GfGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
+|.|. |.|.||...++++.... .+|+++.
T Consensus 173 ~vlV~gag~G~vG~~a~q~a~~~G---a~Vi~~~ 203 (379)
T 3iup_A 173 SALVHTAAASNLGQMLNQICLKDG---IKLVNIV 203 (379)
T ss_dssp SCEEESSTTSHHHHHHHHHHHHHT---CCEEEEE
T ss_pred EEEEECCCCCHHHHHHHHHHHHCC---CEEEEEE
Confidence 68998 79999999998887653 4777775
No 489
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=31.03 E-value=42 Score=35.35 Aligned_cols=29 Identities=17% Similarity=0.386 Sum_probs=23.6
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCceEEEE
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVV 118 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaI 118 (453)
.+|+|.|+|.||+.+++.|.... ..|+..
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~G---A~Viv~ 294 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAG---ARVIVT 294 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT---CEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCC---CEEEEE
Confidence 47999999999999999998763 466554
No 490
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=30.46 E-value=47 Score=31.98 Aligned_cols=31 Identities=13% Similarity=0.140 Sum_probs=25.4
Q ss_pred eeEEEEcCChhHHHHHHHHHhCCCCCc-eEEEEcC
Q 012940 87 LKVAINGFGRIGRNFLRCWHGRKDSPL-DVVVVND 120 (453)
Q Consensus 87 ikVaInGfGrIGR~vlr~l~~r~~~~i-eiVaInd 120 (453)
.+|.|.|.|.+||.+++.|.+.. . +|+.+|.
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G---~~~V~v~nR 173 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTA---AERIDMANR 173 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT---CSEEEEECS
T ss_pred CEEEEECcHHHHHHHHHHHHHCC---CCEEEEEeC
Confidence 48999999999999999998753 4 6666765
No 491
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=30.31 E-value=1.4e+02 Score=30.13 Aligned_cols=74 Identities=14% Similarity=0.077 Sum_probs=0.0
Q ss_pred eEEEEcCChhHHHHHHHHHhCCCCCceEEEEcCCCChhhhhhhhccccceee-cCceEEEecCCeEEECCeEEEEEeCCC
Q 012940 88 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVKNASHLLKYDSLLGT-FKADVKIVDNETISVDGKLIKVVSNRD 166 (453)
Q Consensus 88 kVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd~~~~~~~a~LlkyDS~~G~-f~~~v~~~~~~~l~v~Gk~I~v~~~~d 166 (453)
+|.|+|.|.+|-.++..|..... +|+.+... +...+. ++..++. ...--.+.+..+.+ .+
T Consensus 199 ~VvVVG~G~sg~eiA~~l~~~g~---~V~li~~~------------~~~~~~~~~~~V~~-~~~V~~i~~~~V~~---~d 259 (464)
T 2xve_A 199 TVLLVGSSYSAEDIGSQCYKYGA---KKLISCYR------------TAPMGYKWPENWDE-RPNLVRVDTENAYF---AD 259 (464)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTC---SEEEEECS------------SCCCCCCCCTTEEE-CSCEEEECSSEEEE---TT
T ss_pred EEEEEcCCCCHHHHHHHHHHhCC---eEEEEEEC------------CCCCCCCCCCceEE-cCCeEEEeCCEEEE---CC
Q ss_pred CCCCCccccCccEEEcCCC
Q 012940 167 PLQLPWAELGIDIVIEGTG 185 (453)
Q Consensus 167 p~~l~W~~~gvDiVie~TG 185 (453)
-..+ .+|.||.|||
T Consensus 260 G~~i-----~~D~Vi~atG 273 (464)
T 2xve_A 260 GSSE-----KVDAIILCTG 273 (464)
T ss_dssp SCEE-----ECSEEEECCC
T ss_pred CCEE-----eCCEEEECCC
No 492
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=30.23 E-value=45 Score=32.46 Aligned_cols=22 Identities=32% Similarity=0.385 Sum_probs=19.4
Q ss_pred eeEEEEcC-ChhHHHHHHHHHhC
Q 012940 87 LKVAINGF-GRIGRNFLRCWHGR 108 (453)
Q Consensus 87 ikVaInGf-GrIGR~vlr~l~~r 108 (453)
|||+|.|. |.||..++..|..+
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~ 23 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNS 23 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTC
T ss_pred CEEEEECCCChHHHHHHHHHHhC
Confidence 48999996 99999999988865
No 493
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=30.22 E-value=43 Score=32.69 Aligned_cols=23 Identities=26% Similarity=0.366 Sum_probs=20.0
Q ss_pred eeeEEEEcC-ChhHHHHHHHHHhC
Q 012940 86 KLKVAINGF-GRIGRNFLRCWHGR 108 (453)
Q Consensus 86 ~ikVaInGf-GrIGR~vlr~l~~r 108 (453)
++||+|.|. |.||..++..|..+
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~ 28 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANG 28 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTT
T ss_pred CCEEEEECCCChHHHHHHHHHHhC
Confidence 479999995 99999999888764
No 494
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=30.19 E-value=1.7e+02 Score=30.39 Aligned_cols=88 Identities=13% Similarity=0.067 Sum_probs=53.6
Q ss_pred eeEEEEcCChhHHH-HHHHHHhCCCCCceEEEEcCCC-ChhhhhhhhccccceeecCceEEEecCCeEEECCeEEEEEeC
Q 012940 87 LKVAINGFGRIGRN-FLRCWHGRKDSPLDVVVVNDSG-GVKNASHLLKYDSLLGTFKADVKIVDNETISVDGKLIKVVSN 164 (453)
Q Consensus 87 ikVaInGfGrIGR~-vlr~l~~r~~~~ieiVaInd~~-~~~~~a~LlkyDS~~G~f~~~v~~~~~~~l~v~Gk~I~v~~~ 164 (453)
.||-++|.|.+|.. +.+.|.++. .+|.+ .|.. .+.....|-+ . | |.+...
T Consensus 20 ~~i~~iGiGg~Gms~lA~~l~~~G---~~V~~-sD~~~~~~~~~~L~~---------------~-------g--i~~~~G 71 (524)
T 3hn7_A 20 MHIHILGICGTFMGSLALLARALG---HTVTG-SDANIYPPMSTQLEQ---------------A-------G--VTIEEG 71 (524)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTT---CEEEE-EESCCCTTHHHHHHH---------------T-------T--CEEEES
T ss_pred CEEEEEEecHhhHHHHHHHHHhCC---CEEEE-ECCCCCcHHHHHHHH---------------C-------C--CEEECC
Confidence 48999999999997 577777664 46444 4431 1111112211 1 1 122223
Q ss_pred CCCCCCCccccCccEEEcCCCCCCChhhHHHHHHcCCCEEEEe
Q 012940 165 RDPLQLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIIT 207 (453)
Q Consensus 165 ~dp~~l~W~~~gvDiVie~TG~f~s~e~a~~hl~aGAkkVIIS 207 (453)
.+++++. .++|+||=+.|.-.+.+...++.+.|.+ |++
T Consensus 72 ~~~~~~~---~~~d~vV~Spgi~~~~p~l~~a~~~gi~--v~~ 109 (524)
T 3hn7_A 72 YLIAHLQ---PAPDLVVVGNAMKRGMDVIEYMLDTGLR--YTS 109 (524)
T ss_dssp CCGGGGC---SCCSEEEECTTCCTTSHHHHHHHHHTCC--EEE
T ss_pred CCHHHcC---CCCCEEEECCCcCCCCHHHHHHHHCCCc--EEE
Confidence 4454442 2589999999988887777788888873 554
No 495
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=29.93 E-value=37 Score=32.41 Aligned_cols=29 Identities=7% Similarity=0.010 Sum_probs=23.7
Q ss_pred eEEEEc-CChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 88 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 88 kVaInG-fGrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
+|.|.| .|.||+.+++.+..+. .+|+++.
T Consensus 143 ~vlV~Ga~ggiG~~~~~~a~~~G---~~V~~~~ 172 (327)
T 1qor_A 143 QFLFHAAAGGVGLIACQWAKALG---AKLIGTV 172 (327)
T ss_dssp EEEESSTTBHHHHHHHHHHHHHT---CEEEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHcC---CEEEEEe
Confidence 799999 8999999999887653 4777764
No 496
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=29.82 E-value=35 Score=33.51 Aligned_cols=23 Identities=35% Similarity=0.299 Sum_probs=20.3
Q ss_pred eeeEEEEcCChhHHHHHHHHHhC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGR 108 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r 108 (453)
++||+|.|.|.+|..++..|...
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~ 31 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALR 31 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC
Confidence 46999999999999999888764
No 497
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=29.74 E-value=53 Score=29.31 Aligned_cols=30 Identities=20% Similarity=0.253 Sum_probs=24.6
Q ss_pred eEEEEc-CChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 88 KVAING-FGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 88 kVaInG-fGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
+|-|.| .|-||+.+++.|.++. .+|+++..
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~~g---~~V~~~~r 33 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLARAG---HTVIGIDR 33 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT---CEEEEEES
T ss_pred EEEEeCCCcHHHHHHHHHHHhCC---CEEEEEeC
Confidence 689999 8999999999998764 47776643
No 498
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=29.36 E-value=20 Score=34.83 Aligned_cols=30 Identities=13% Similarity=0.191 Sum_probs=23.2
Q ss_pred eEEEEcC-ChhHHHHHHHHHhCCCCCceEEEEc
Q 012940 88 KVAINGF-GRIGRNFLRCWHGRKDSPLDVVVVN 119 (453)
Q Consensus 88 kVaInGf-GrIGR~vlr~l~~r~~~~ieiVaIn 119 (453)
+|.|+|. |.||...++++... ....|+++.
T Consensus 145 ~VlV~Ga~G~vG~~a~qla~~~--g~~~V~~~~ 175 (349)
T 4a27_A 145 SVLVHSAGGGVGQAVAQLCSTV--PNVTVFGTA 175 (349)
T ss_dssp EEEESSTTSHHHHHHHHHHTTS--TTCEEEEEE
T ss_pred EEEEEcCCcHHHHHHHHHHHHc--CCcEEEEeC
Confidence 7999995 99999999877543 235777775
No 499
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=29.36 E-value=33 Score=33.45 Aligned_cols=23 Identities=22% Similarity=0.328 Sum_probs=20.0
Q ss_pred eeeEEEEcCChhHHHHHHHHHhC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGR 108 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r 108 (453)
++||+|.|.|.||..++..|..+
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~ 28 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQ 28 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC
Confidence 47999999999999999877754
No 500
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=29.20 E-value=48 Score=34.20 Aligned_cols=32 Identities=25% Similarity=0.427 Sum_probs=26.9
Q ss_pred eeeEEEEcCChhHHHHHHHHHhCCCCCceEEEEcC
Q 012940 86 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND 120 (453)
Q Consensus 86 ~ikVaInGfGrIGR~vlr~l~~r~~~~ieiVaInd 120 (453)
.+||||.|.|.+|..+..+|.+.. .+|++++-
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G---~~V~~~D~ 39 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFG---HEVVCVDK 39 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CEEEEECS
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCC---CEEEEEeC
Confidence 479999999999999999998764 58877764
Done!