Query 012941
Match_columns 453
No_of_seqs 250 out of 514
Neff 5.6
Searched_HMMs 13730
Date Mon Mar 25 19:12:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012941.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/012941hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1fo8a_ c.68.1.10 (A:) N-acety 100.0 2.2E-96 2E-100 742.5 31.8 336 112-452 1-340 (343)
2 d1qg8a_ c.68.1.1 (A:) Spore co 99.1 3.9E-10 2.8E-14 103.9 13.2 174 113-301 1-197 (255)
3 d1xhba2 c.68.1.17 (A:95-422) P 99.0 1.3E-09 9.2E-14 104.6 14.1 189 110-322 19-252 (328)
4 d1omza_ c.68.1.15 (A:) Alpha-1 98.8 4E-09 2.9E-13 92.8 6.4 104 112-235 2-106 (265)
5 d2bo4a1 c.68.1.18 (A:2-382) Ma 90.8 0.43 3.1E-05 46.5 9.7 106 116-235 2-117 (381)
6 d1ga8a_ c.68.1.4 (A:) Galactos 84.0 0.62 4.5E-05 42.0 5.7 119 118-249 3-130 (282)
7 d1pzta_ c.68.1.2 (A:) beta 1,4 68.8 6 0.00044 36.2 7.8 86 112-230 48-133 (271)
8 d1v82a_ c.68.1.7 (A:) Beta-1,3 38.0 66 0.0048 28.7 9.2 110 113-233 2-128 (252)
9 d1s4na_ c.68.1.16 (A:) Glycoli 28.7 2.1E+02 0.015 26.2 12.4 124 104-233 9-163 (339)
10 d1ykhb1 a.252.1.1 (B:2-130) RN 24.4 99 0.0072 24.5 7.2 49 42-90 54-109 (129)
11 d1ta0a_ c.108.1.16 (A:) Carbox 22.0 17 0.0012 30.4 1.9 42 118-167 51-92 (181)
No 1
>d1fo8a_ c.68.1.10 (A:) N-acetylglucosaminyltransferase I {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=100.00 E-value=2.2e-96 Score=742.48 Aligned_cols=336 Identities=40% Similarity=0.823 Sum_probs=300.1
Q ss_pred CceeeEEEEecCchHHHHHHHHHHHhccCCCCCCccEEEeeCCCChhHHHHHhhcC-CcceeeeccccccCCCC-CCChh
Q 012941 112 VPVAAVVIMACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYD-KLTYMQHLDFEPVHADN-PGELT 189 (453)
Q Consensus 112 ~p~~PIlI~a~NRP~~l~R~LesL~k~~~~~~~~~~LiVsqDG~~~et~~vi~s~~-~~~~i~~~~~~~in~~~-~~~~~ 189 (453)
|+++||||+||||| +|+|||++|++++| ++++++|||++||+++++.+++++|. .+..+++++...++... ..+..
T Consensus 1 ~~viPVlv~a~NRP-~l~r~LesLlk~~p-~~~~~~I~Vs~DG~~~~~~~~v~~~~~~v~~I~~~~~~~~~~~~~~~k~~ 78 (343)
T d1fo8a_ 1 LAVIPILVIACDRS-TVRRCLDKLLHYRP-SAELFPIIVSQDCGHEETAQVIASYGSAVTHIRQPDLSNIAVQPDHRKFQ 78 (343)
T ss_dssp CCCCCEEEEESSCT-THHHHHHHHHHHCS-CTTTSCEEEEECTTCHHHHHHHHTTGGGSEEEECSCCCCCCCCTTCGGGH
T ss_pred CCcccEEEEEcCHH-HHHHHHHHHHhcCc-cccCccEEEEecCCchhHHHHHHHHHHHHHHhcCCccccceecchhhccc
Confidence 57899999999999 69999999999875 68999999999999999999999984 56677777665544433 23467
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCcEEEEEccCceeChhHHHHHHHHHHhhcCCCcEEEEecCCCCCCCccc--CCCceeee
Q 012941 190 AYYKIARHYKWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSWNDNGQKQFV--HDPYVLYR 267 (453)
Q Consensus 190 ~y~~IarHYk~aLs~vF~~~~~~~vIILEDDl~~SPDFf~Yf~~~l~ly~~D~sI~~ISawNdng~~~~v--~d~~~lyR 267 (453)
+|++|++||+|||+++|+..+|+++|||||||++|||||+||++++++|++|++||||||||+||+...+ .+|..+||
T Consensus 79 ~n~giarhy~~AL~~~F~~~~~~~~IiLEDDl~~spdFf~y~~~~l~~~~~D~~i~~IS~wNdnG~~~~~~~~~~~~lyr 158 (343)
T d1fo8a_ 79 GYYKIARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQATYPLLKADPSLWCVSAWNDNGKEQMVDSSKPELLYR 158 (343)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCCSEEEEEETTEEECTTHHHHHHHHHHHHHHCTTEEEEESCCTTCBGGGSCTTCTTCEEE
T ss_pred chhHHHHHHHHHHHHHhcccCCceEEEEecCceeeHHHHHHHHHHHHHHhcCCCEEEEeccccCCCcccccCCCCceEEe
Confidence 8999999999999999998778999999999999999999999999999999999999999999998765 56889999
Q ss_pred cCCCcccccccchhhhhhhCCCCCccchHHHHHHHHhhcCCceeecCCcceeccCCCCCChhHhHHhhhcCCCCCCCccc
Q 012941 268 SDFFPGLGWMLTRTTWDELSPKWPKAYWDDWLRLKENHKGRQFIRPEVCRTYNFGEHGSSLGQFFQQYLAPIKLNDVPVD 347 (453)
Q Consensus 268 sdffpgwGWalwr~~W~el~p~WP~~~WDdWlR~~~~rkgr~cI~PevSRt~niG~~G~s~~~~f~~yl~~ikln~~~v~ 347 (453)
|+|||||||||||++|+|++|+||..+||+|||.+++|+||+||+||+|||.|||..|+++|++|++||++|++|+..++
T Consensus 159 s~~fpg~GW~~~r~~W~el~~kwp~~~Wd~w~r~~~~rkgr~cI~PevsRt~~fG~~G~~~~~~~~~~l~~~~ln~~~~~ 238 (343)
T d1fo8a_ 159 TDFFPGLGWLLLAELWAELEPKWPKAFWDDWMRRPEQRKGRACVRPEISRTMTFGRKGVSHGQFFDQHLKFIKLNQQFVP 238 (343)
T ss_dssp ESSCCCSSEEEEHHHHHHHGGGCCSSCHHHHHTSHHHHTTCEEEEESSBSEEECC-------------CTTBCBCCSCCC
T ss_pred ecCCCchhhheeHHHHHHhhhcCCCCCcHHhhhhHHhcCCCeeeccCccceeeecccCcccchHHHHHHhhcccccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceecCccccchhhHHHHHHHHHHhcCccccccccccccCCCCcEEEEeCChhHHHHHHHHcCcccccCCCCCCCccceEE
Q 012941 348 WKSRDLSYLIKDNYEKYFAEIVKKATPVHGENVVLKAHDIEGDVRIEYKDQSHFEIIARQFGIFNEWKDGIPRTAYKGVV 427 (453)
Q Consensus 348 f~~~dl~yL~~~~Yd~~~~~~v~~a~~i~~~~~~~~~~~~~~~~~i~Y~~~~~~~~~a~~~~~~~d~k~gvpR~~Y~Gvv 427 (453)
|+++|++||++++||+.|+++|++|++++.+++..+..+..+++||+|++..+|+.+|++||||+|||+|||||+|+|||
T Consensus 239 ~~~~~l~~l~~~~y~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~ri~y~~~~~~~~~a~~~~i~~~~k~g~~R~~y~giv 318 (343)
T d1fo8a_ 239 FTQLDLSYLQQEAYDRDFLARVYGAPQLQVEKVRTNDRKELGEVRVQYTGRDSFKAFAKALGVMDDLKSGVPRAGYRGIV 318 (343)
T ss_dssp GGGSCCGGGSHHHHHHHHHHHHHHSCBCCHHHHHTTCCTTCSEEEEECCSHHHHHHHHHHTTCCCCEETTEETTCBTTBE
T ss_pred ccccCHHHhhhHHHHHHHHHHHhcCCcccHHHhcccccCCCCcEEEEECCHHHHHHHHHHhCCHhhccccCcccccceEE
Confidence 99999999999999999999999999999999877777888999999999999999999999999999999999999999
Q ss_pred EEEEcCCCEEEEECCCCccccCcCC
Q 012941 428 VFRYQTPRRIFLVGPDSLRQLGIKD 452 (453)
Q Consensus 428 ~~~~~~~~~v~lv~~~s~~~~~~~~ 452 (453)
+|+++ |+||||||+.+ +.||+.
T Consensus 319 ~~~~~-~~rv~lvp~~~--~~~y~~ 340 (343)
T d1fo8a_ 319 TFLFR-GRRVHLAPPQT--WDGYDP 340 (343)
T ss_dssp EEEET-TEEEEEECCTT--CCSCCT
T ss_pred EEEEC-CEEEEEeCCCC--cCcCCC
Confidence 99999 89999999865 677764
No 2
>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]}
Probab=99.09 E-value=3.9e-10 Score=103.89 Aligned_cols=174 Identities=15% Similarity=0.169 Sum_probs=104.0
Q ss_pred ceeeEEEEecCchHHHHHHHHHHHhccCCCCCCccEEEeeCCCChhHHHHHhhcCCcceeeeccccccCCC--CCCChhH
Q 012941 113 PVAAVVIMACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDKLTYMQHLDFEPVHAD--NPGELTA 190 (453)
Q Consensus 113 p~~PIlI~a~NRP~~l~R~LesL~k~~~~~~~~~~LiVsqDG~~~et~~vi~s~~~~~~i~~~~~~~in~~--~~~~~~~ 190 (453)
|.+.|+|+|||+++++++||+||+++. ...++|+|..||+.++|.++++++.....++....+. ... ...+
T Consensus 1 P~vSiiip~yN~~~~l~~~l~Si~~Qt---~~~~eiivvdd~S~d~t~~~l~~~~~~~~i~~~~~~~-~~~~~~~~~--- 73 (255)
T d1qg8a_ 1 PKVSVIMTSYNKSDYVAKSISSILSQT---FSDFELFIMDDNSNEETLNVIRPFLNDNRVRFYQSDI-SGVKERTEK--- 73 (255)
T ss_dssp CCEEEEEEESSCTTTHHHHHHHHHTCS---CCCEEEEEEECSCCHHHHHHHGGGGGSTTEEEEECCC-CSHHHHHSS---
T ss_pred CEEEEEEecCCCHHHHHHHHHHHHhCC---CCCeEEEEEECCCCccHHHHHHHhhhhcccccccccc-ccccccccc---
Confidence 678999999999999999999999854 3468999999999999999999884322232221111 100 0000
Q ss_pred HHHHHHHHHHHHHHHhhhcCCcEEEEEccCceeChhHHHHHHHHHHhhcCCCcEEEEecC------CCCCCC--ccc--C
Q 012941 191 YYKIARHYKWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSSW------NDNGQK--QFV--H 260 (453)
Q Consensus 191 y~~IarHYk~aLs~vF~~~~~~~vIILEDDl~~SPDFf~Yf~~~l~ly~~D~sI~~ISaw------Ndng~~--~~v--~ 260 (453)
...++..+.|+..+ ..+.++++++|..+.|++++-+.+.+ +.++.+.+|.+. +.++.. ... .
T Consensus 74 -~g~~~a~N~gi~~a----~g~~i~~lD~Dd~~~p~~l~~~~~~~---~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 145 (255)
T d1qg8a_ 74 -TRYAALINQAIEMA----EGEYITYATDDNIYMPDRLLKMVREL---DTHPEKAVIYSASKTYHLNENRDIVKETVRPA 145 (255)
T ss_dssp -CHHHHHHHHHHHHC----CCSEEEEEETTEEECTTHHHHHHHHH---HHCTTCCEEEEEEEEEEEC---CEEEEEEECC
T ss_pred -chhccccccccccc----ccccccccccccccccchHHHHHHHH---HhCCCCCeEeecceeeeeCCCCcEeeeecccc
Confidence 12344334455444 57999999999999999887554444 444544444321 222210 000 0
Q ss_pred CCceeeecCCCcccccccchhhhhhhC----CCC-------CccchHHHHHH
Q 012941 261 DPYVLYRSDFFPGLGWMLTRTTWDELS----PKW-------PKAYWDDWLRL 301 (453)
Q Consensus 261 d~~~lyRsdffpgwGWalwr~~W~el~----p~W-------P~~~WDdWlR~ 301 (453)
..........+.+.++|..++.|+++. ..+ -..+||.|+|.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~dl~lrl 197 (255)
T d1qg8a_ 146 AQVTWNAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRV 197 (255)
T ss_dssp CSCBSCCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHH
T ss_pred hhhhhhhcccccchhHHHHHHHHHHHHHhhCCCccccchhcchhhHHHHHHH
Confidence 111111222455677777788887642 111 22468888884
No 3
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.02 E-value=1.3e-09 Score=104.62 Aligned_cols=189 Identities=14% Similarity=0.128 Sum_probs=113.1
Q ss_pred CCCceeeEEEEecCch-HHHHHHHHHHHhccCCCCCCccEEEeeCCCChhH-HHHH----hhcC-CcceeeeccccccCC
Q 012941 110 VQVPVAAVVIMACNRA-NYLERTINSVFKYQGSVASKYPLFVSQDGSNPQV-KSKA----LSYD-KLTYMQHLDFEPVHA 182 (453)
Q Consensus 110 ~~~p~~PIlI~a~NRP-~~l~R~LesL~k~~~~~~~~~~LiVsqDG~~~et-~~vi----~s~~-~~~~i~~~~~~~in~ 182 (453)
.++|.+.|||++||+. ++|.+||+||+++.++ ....+|+|..||+.+++ ++.+ +.+. .++.+++ +.|.
T Consensus 19 ~~~P~vSIIIp~yNe~~~~l~~~l~Si~~qt~~-~~~~EIIvVDdgS~d~~~~~~l~~~~~~~~~~i~vi~~----~~n~ 93 (328)
T d1xhba2 19 DNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPR-HMIEEIVLVDDASERDFLKRPLESYVKKLKVPVHVIRM----EQRS 93 (328)
T ss_dssp SCCCCEEEEEEESSCCHHHHHHHHHHHHHSSCG-GGEEEEEEEECSCCCGGGTHHHHHHHHSSSSCEEEEEC----SSCC
T ss_pred CCCCCEEEEEeccCCcHHHHHHHHHHHHhcCCC-CCCeEEEEEECCCChhhHHHHHHHHHHhcCCCeEEEEe----cccc
Confidence 4689999999999985 6799999999996542 22247999999997653 3333 3332 2333321 1132
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhhhcCCcEEEEEccCceeChhHHHHHHHHHHhhcCCCcEEEEec---CCCC-----C
Q 012941 183 DNPGELTAYYKIARHYKWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSS---WNDN-----G 254 (453)
Q Consensus 183 ~~~~~~~~y~~IarHYk~aLs~vF~~~~~~~vIILEDDl~~SPDFf~Yf~~~l~ly~~D~sI~~ISa---wNdn-----g 254 (453)
| .++-.+.|+.. ...+.+++|++|+++.|++++-+... +.+++....+.. .... +
T Consensus 94 G----------~~~a~N~Gi~~----a~gd~i~flD~D~~~~p~~l~~l~~~---~~~~~~~~v~~~~~~i~~~~~~~~~ 156 (328)
T d1xhba2 94 G----------LIRARLKGAAV----SRGQVITFLDAHCECTAGWLEPLLAR---IKHDRRTVVCPIIDVISDDTFEYMA 156 (328)
T ss_dssp C----------HHHHHHHHHHH----CCSSEEEEEESSEEECTTCHHHHHHH---HHHCTTEEEEEEEEEECSSSCCEEC
T ss_pred c----------chHHHHHHHHh----hhcceeeecCcccccChhHHHHHHHH---HhcCCCeEEecceeeeccCceeecc
Confidence 2 22222335544 35799999999999999998755443 344443332211 0000 0
Q ss_pred CC------------------------cccCCCceeeecCCCcccccccchhhhhhh---CCCCC---ccchHHHHHHHHh
Q 012941 255 QK------------------------QFVHDPYVLYRSDFFPGLGWMLTRTTWDEL---SPKWP---KAYWDDWLRLKEN 304 (453)
Q Consensus 255 ~~------------------------~~v~d~~~lyRsdffpgwGWalwr~~W~el---~p~WP---~~~WDdWlR~~~~ 304 (453)
.. ....+....+.+.+++|-.+|+.|+.|+++ ++... ..++|-++| ..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~f~~vGgfDe~~~~~g~ED~Dl~~R--~~ 234 (328)
T d1xhba2 157 GSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFR--IW 234 (328)
T ss_dssp CCTTEEEEECTTCCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHTTSCCTTSCTTCCCCSHHHHH--HH
T ss_pred CCccccccccccccccccccchhhhhccccccccccccceecceeeeeeHHHHHHhCCCCCCCcCcCchHHHHHHH--HH
Confidence 00 000112223344566777788999999975 44432 346777787 44
Q ss_pred hcCCceeecCCcceeccC
Q 012941 305 HKGRQFIRPEVCRTYNFG 322 (453)
Q Consensus 305 rkgr~cI~PevSRt~niG 322 (453)
..|..+.+-.-+++.|..
T Consensus 235 ~~G~~i~~~p~~~v~H~~ 252 (328)
T d1xhba2 235 QCGGTLEIVTCSHVGHVF 252 (328)
T ss_dssp HTTCEEEEEEEEEEEEEC
T ss_pred HhCCeEEEeCCeEEEEeC
Confidence 567777764456777764
No 4
>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.75 E-value=4e-09 Score=92.76 Aligned_cols=104 Identities=13% Similarity=0.098 Sum_probs=64.6
Q ss_pred CceeeEEEEecCchHHHHHHHHHHHhccCCCCCCccEEEeeCCCChh-HHHHHhhcCCcceeeeccccccCCCCCCChhH
Q 012941 112 VPVAAVVIMACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQ-VKSKALSYDKLTYMQHLDFEPVHADNPGELTA 190 (453)
Q Consensus 112 ~p~~PIlI~a~NRP~~l~R~LesL~k~~~~~~~~~~LiVsqDG~~~e-t~~vi~s~~~~~~i~~~~~~~in~~~~~~~~~ 190 (453)
|....|||+|||||++|++||+||+++..+ . .++|..|++.++ +..+...+......... . ..|.|...
T Consensus 2 ~~~~tvii~tyn~~~~l~~~l~sl~~q~~~---~-~~iiV~d~~sd~~~~~i~~~~~~~~~~~~~-~-~~~~g~~~---- 71 (265)
T d1omza_ 2 LDSFTLIMQTYNRTDLLLRLLNHYQAVPSL---H-KVIVVWNNVGEKGPEELWNSLGPHPIPVIF-K-PQTANKMR---- 71 (265)
T ss_dssp TTCEEEEEEESSCHHHHHHHHHHHTTSTTE---E-EEEEEECCTTCCCTHHHHHHTCCCSSCEEE-E-ECSSCCGG----
T ss_pred CCcEEEEEEcCCCHHHHHHHHHHHHcCCCc---C-eEEEEECCCCCccHHHHHHHhcccceEEEE-e-cCCCCchh----
Confidence 456789999999999999999999986432 2 345555555444 44444444321111111 1 11333322
Q ss_pred HHHHHHHHHHHHHHHhhhcCCcEEEEEccCceeChhHHHHHHHHH
Q 012941 191 YYKIARHYKWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAA 235 (453)
Q Consensus 191 y~~IarHYk~aLs~vF~~~~~~~vIILEDDl~~SPDFf~Yf~~~l 235 (453)
|.+..++..+.+.+++++||..+.|++++-+-+.+
T Consensus 72 ----------a~n~~~~~a~ge~i~~lD~D~~~~~~~l~~l~~~~ 106 (265)
T d1omza_ 72 ----------NRLQVFPEVETNAVLMVDDDTLISAQDLVFAFSIW 106 (265)
T ss_dssp ----------GGGSCCTTCCSSEEEEECTTEEECHHHHHHHHHHH
T ss_pred ----------hhhhhHHhCCcCEEEEeCcccCCCHHHHHHHHHHH
Confidence 22333444457999999999999999988655544
No 5
>d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]}
Probab=90.82 E-value=0.43 Score=46.45 Aligned_cols=106 Identities=13% Similarity=0.158 Sum_probs=57.0
Q ss_pred eEEEEecCc-hHHHHHHHHHHHhccCCCCCCccEEEeeCCCChhHHHHHhhcCCc-----ceee-ec--cccccCCCCCC
Q 012941 116 AVVIMACNR-ANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDKL-----TYMQ-HL--DFEPVHADNPG 186 (453)
Q Consensus 116 PIlI~a~NR-P~~l~R~LesL~k~~~~~~~~~~LiVsqDG~~~et~~vi~s~~~~-----~~i~-~~--~~~~in~~~~~ 186 (453)
-|||+++|- +..+.++++.+... |. ...|+|..|++++.+..+.+..... ..+. +. ....++.|.
T Consensus 2 lVVIP~~NEe~~il~~~v~~~a~~-P~---~~eIvVvDdsSdDtt~~i~~~~~~~~~~~~~~v~~~~~~~l~~~~~GK-- 75 (381)
T d2bo4a1 2 LVVFPFKHEHPEVLLHNVRVAAAH-PR---VHEVLCIGYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLRPGK-- 75 (381)
T ss_dssp EEEEECCSSCHHHHHHHHHHHHHS-TT---CCEEEEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSSSSH--
T ss_pred EEEEEcCCCcHHHHHHHHHHHHhC-CC---eeEEEEEcCCCCCcHHHHHHHhhhhhccccccchhhhhcccccccCCC--
Confidence 489999999 46677777655552 32 2245555555554433333222100 0111 11 011122221
Q ss_pred ChhHHHHHHHHHHHHHHHHhhhcCCcEEEEEccCc-eeChhHHHHHHHHH
Q 012941 187 ELTAYYKIARHYKWALDNLFYKHNFSRVIILEDDM-EIAPDFFDYFEAAA 235 (453)
Q Consensus 187 ~~~~y~~IarHYk~aLs~vF~~~~~~~vIILEDDl-~~SPDFf~Yf~~~l 235 (453)
+ +-...|+...+.....+.+++++-|+ ...|+.+.-+...+
T Consensus 76 ---G-----~g~~~A~~~g~~~a~gd~lvflDADl~~~~pe~i~~L~~~i 117 (381)
T d2bo4a1 76 ---G-----DGMNTALRYFLEETQWERIHFYDADITSFGPDWITKAEEAA 117 (381)
T ss_dssp ---H-----HHHHHHHHHHHHHCCCSEEEECCTTCSSCCHHHHHHHHHHH
T ss_pred ---c-----HHHHHHHHHHHHhCCCCEEEEEcCCcCcCCHHHHHHHHHHH
Confidence 1 11122666666666789999999999 57899988665544
No 6
>d1ga8a_ c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseria meningitidis [TaxId: 487]}
Probab=84.00 E-value=0.62 Score=42.03 Aligned_cols=119 Identities=15% Similarity=0.164 Sum_probs=66.8
Q ss_pred EEEecCc--hHHHHHHHHHHHhccCCCCCCccEEEeeCCCChhHHHHHhhcC-----Ccceee--eccccccCCCCCCCh
Q 012941 118 VIMACNR--ANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYD-----KLTYMQ--HLDFEPVHADNPGEL 188 (453)
Q Consensus 118 lI~a~NR--P~~l~R~LesL~k~~~~~~~~~~LiVsqDG~~~et~~vi~s~~-----~~~~i~--~~~~~~in~~~~~~~ 188 (453)
|++|+++ -..+.-++.||++..+ .....++|..|+-.++.++.+.+.- .+..+. ...+...... .+.+
T Consensus 3 Iv~~~D~nY~~~~~~~i~SL~~~~~--~~~~~~~il~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~ 79 (282)
T d1ga8a_ 3 IVFAADDNYAAYLCVAAKSVEAAHP--DTEIRFHVLDAGISEANRAAVAANLRGGGGNIRFIDVNPEDFAGFPLN-IRHI 79 (282)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHCT--TSCCEEEEEESSCCHHHHHHHHHTSGGGTTTEEEEECCGGGGTTSCCC-CTTC
T ss_pred EEEECCHHHHHHHHHHHHHHHHHCc--CCCEEEEEEcCCCCHHHHHHHHHHHHHcCCeEEEEECCchHhcccccc-cccc
Confidence 4677776 5778888999988543 2456788888887777666554431 121121 1111111111 1111
Q ss_pred hHHHHHHHHHHHHHHHHhhhcCCcEEEEEccCceeChhHHHHHHHHHHhhcCCCcEEEEec
Q 012941 189 TAYYKIARHYKWALDNLFYKHNFSRVIILEDDMEIAPDFFDYFEAAADLLDKDKSIMAVSS 249 (453)
Q Consensus 189 ~~y~~IarHYk~aLs~vF~~~~~~~vIILEDDl~~SPDFf~Yf~~~l~ly~~D~sI~~ISa 249 (453)
..+..+|..+..+|.. ++++|.|+-|+++--|.=+. .+.--.+..+.++..
T Consensus 80 ----s~~~y~Rl~l~~~lp~--~~kiiyLD~D~iv~~dl~~L----~~~~~~~~~~aa~~d 130 (282)
T d1ga8a_ 80 ----SITTYARLKLGEYIAD--CDKVLYLDIDVLVRDSLTPL----WDTDLGDNWLGASID 130 (282)
T ss_dssp ----CGGGGGGGGHHHHCCS--CSCEEEECSSEEECSCCHHH----HTCCCTTCSEEEEEC
T ss_pred ----CHHHHHHHHHhhhCCc--cceEEEecCCEEEecchHHH----Hhcccccceeeeehh
Confidence 1222344556666653 89999999999998775332 222224556666653
No 7
>d1pzta_ c.68.1.2 (A:) beta 1,4 galactosyltransferase (b4GalT1) {Cow (Bos taurus) [TaxId: 9913]}
Probab=68.76 E-value=6 Score=36.19 Aligned_cols=86 Identities=13% Similarity=0.165 Sum_probs=50.4
Q ss_pred CceeeEEEEecCchHHHHHHHHHHHhccCCCCCCccEEEeeCCCChhHHHHHhhcCCcceeeeccccccCCCCCCChhHH
Q 012941 112 VPVAAVVIMACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYDKLTYMQHLDFEPVHADNPGELTAY 191 (453)
Q Consensus 112 ~p~~PIlI~a~NRP~~l~R~LesL~k~~~~~~~~~~LiVsqDG~~~et~~vi~s~~~~~~i~~~~~~~in~~~~~~~~~y 191 (453)
.-.++|||+--||.+||+..|..|...-....-.+.|||.-.... .+-|. +.+
T Consensus 48 ~~kvaIIIPyRdR~~hL~~fl~~l~~~L~~q~~~y~I~vieQ~~~---------------------~~FNR---g~l--- 100 (271)
T d1pzta_ 48 PHKVAIIIPFRNRQEHLKYWLYYLHPILQRQQLDYGIYVINQAGE---------------------SMFNR---AKL--- 100 (271)
T ss_dssp SCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTCEEEEEEEEECSS---------------------SCCCH---HHH---
T ss_pred cceEEEEEecCChHHHHHHHHHHHHHHHHhcCCCEEEEEEeccCC---------------------cchhh---hhh---
Confidence 346899999999999999887777643111122456666422211 11111 111
Q ss_pred HHHHHHHHHHHHHHhhhcCCcEEEEEccCceeChhHHHH
Q 012941 192 YKIARHYKWALDNLFYKHNFSRVIILEDDMEIAPDFFDY 230 (453)
Q Consensus 192 ~~IarHYk~aLs~vF~~~~~~~vIILEDDl~~SPDFf~Y 230 (453)
.+-|...+.+...++.+|+-+-|+.+..|...|
T Consensus 101 ------lNiGf~~a~~~~~~~~~ifHDVDllP~~~~~~Y 133 (271)
T d1pzta_ 101 ------LNVGFKEALKDYDYNCFVFSDVDLIPMNDHNTY 133 (271)
T ss_dssp ------HHHHHHHHHHHSCCCEEEEECTTEEESBTTSCC
T ss_pred ------hhHHHHHhhhccCccEEEEecCCcCcccccccc
Confidence 011333333334578899999999998887543
No 8
>d1v82a_ c.68.1.7 (A:) Beta-1,3-glucuronyltransferase 1, GlcAT-P {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.03 E-value=66 Score=28.68 Aligned_cols=110 Identities=22% Similarity=0.271 Sum_probs=65.0
Q ss_pred ceeeEEEEecCchH---HHHHHHHHHHhccCCCCCCccEEEeeCCC--ChhHHHHHhhcCCcceeeecccc-c----cCC
Q 012941 113 PVAAVVIMACNRAN---YLERTINSVFKYQGSVASKYPLFVSQDGS--NPQVKSKALSYDKLTYMQHLDFE-P----VHA 182 (453)
Q Consensus 113 p~~PIlI~a~NRP~---~l~R~LesL~k~~~~~~~~~~LiVsqDG~--~~et~~vi~s~~~~~~i~~~~~~-~----in~ 182 (453)
|++=||=+||.||. +|.|+-..|+.+ ++ ..=||.-|++ .++|.++++.-. +.+. |+... + ...
T Consensus 2 p~I~vVTPTy~R~~Q~~~LtRLa~TL~lV-p~----l~WIVVEda~~~t~~va~lL~~sg-l~y~-HL~~~~p~~~~~~~ 74 (252)
T d1v82a_ 2 PTIHVVTPTYSRPVQKAELTRMANTLLHV-PN----LHWLVVEDAPRRTPLTARLLRDTG-LNYT-HLHVETPRNYKLRG 74 (252)
T ss_dssp CEEEEEEEECCSTTHHHHHHHHHHHHTTC-SS----EEEEEEESSSSCCHHHHHHHHHHC-CEEE-EEECCCCHHHHCCC
T ss_pred CCEEEECCCCCchhhHHHHHHHHhHHhcC-CC----ceEEEEeCCCCCCHHHHHHHHHcC-CceE-eeccCCCccccccc
Confidence 55667788999984 578888888886 32 3445665654 456888887653 4333 22111 0 000
Q ss_pred CCC--CChhHHHHHHHHHHHHHHHHhhhc----C-CcEEEEEccCceeChhHHHHHHH
Q 012941 183 DNP--GELTAYYKIARHYKWALDNLFYKH----N-FSRVIILEDDMEIAPDFFDYFEA 233 (453)
Q Consensus 183 ~~~--~~~~~y~~IarHYk~aLs~vF~~~----~-~~~vIILEDDl~~SPDFf~Yf~~ 233 (453)
..+ ..-.+ ....+-||.++=+++ + .+=|.|-+||..-+..||+-|.+
T Consensus 75 ~~~~~~~~rg----~~qRn~aL~~iR~~~~~~~~~~GVVyFADDdNtYsl~lFdemR~ 128 (252)
T d1v82a_ 75 DARDPRIPRG----TMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEEMRS 128 (252)
T ss_dssp -----CCCTT----HHHHHHHHHHHHHHSCTTCCCCEEEEECCTTSEECHHHHHHHTT
T ss_pred cccccccccc----HHHHHHHHHHHHHhcccccCcceEEEEecCCCcccHHHHHHHhh
Confidence 000 00011 112345898885431 1 36688999999999999986653
No 9
>d1s4na_ c.68.1.16 (A:) Glycolipid 2-alpha-mannosyltransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=28.74 E-value=2.1e+02 Score=26.18 Aligned_cols=124 Identities=15% Similarity=0.228 Sum_probs=68.0
Q ss_pred ccccCCCCCceeeEEEEecCchHHHHHHHHHHHhccCC--CCCCccEEEeeCCCCh-hHHHHHhhc-CC-cceeeec---
Q 012941 104 ERLVDKVQVPVAAVVIMACNRANYLERTINSVFKYQGS--VASKYPLFVSQDGSNP-QVKSKALSY-DK-LTYMQHL--- 175 (453)
Q Consensus 104 ~~~~~~~~~p~~PIlI~a~NRP~~l~R~LesL~k~~~~--~~~~~~LiVsqDG~~~-et~~vi~s~-~~-~~~i~~~--- 175 (453)
+...++...+.|.+|++|=|. .|..+|.||..+... ..-.+|.++..|++-+ +-.+.+.+. .+ +.....+
T Consensus 9 p~~~~~~~~~~A~~v~L~RN~--el~~~l~si~~~e~rFN~ky~YPwvflnd~~fteeFk~~i~~~~sg~~~F~~i~~e~ 86 (339)
T d1s4na_ 9 PSFANKAGKPKACYVTLVRNK--ELKGLLSSIKYVENKINKKFPYPWVFLNDEPFTEEFKEAVTKAVSSEVKFGILPKEH 86 (339)
T ss_dssp GGC--CCSCCCEEEEEECCGG--GHHHHHHHHHHHHHHTTTTSCCCEEEEESSCCCHHHHHHHHHHCSSCEEEEECCGGG
T ss_pred CcccCCCCCcceEEEEEeehH--HHHHHHHHHHHHHHHccccCCCCEEEecCCCCCHHHHHHHHHhcCCceEEEEcCHHH
Confidence 444555556778888887763 488888887754311 2345788888898855 333444433 22 2111111
Q ss_pred ----cccc------------cCCCCCCChhHHHHHHHHHHHHHHHHhhh---cCCcEEEEEccCcee----ChhHHHHHH
Q 012941 176 ----DFEP------------VHADNPGELTAYYKIARHYKWALDNLFYK---HNFSRVIILEDDMEI----APDFFDYFE 232 (453)
Q Consensus 176 ----~~~~------------in~~~~~~~~~y~~IarHYk~aLs~vF~~---~~~~~vIILEDDl~~----SPDFf~Yf~ 232 (453)
+.-+ .++. .+...+|-.+.| |-...++.. .+|+...-||||..+ ..|-|.||.
T Consensus 87 w~~P~~Id~~~~~~~~~~~~~~v~-yg~s~sYrhMCR---F~sg~f~~~p~L~~YdYywRvdpD~~f~cdI~yD~F~~M~ 162 (339)
T d1s4na_ 87 WSYPEWINQTKAAEIRADAATKYI-YGGSESYRHMCR---YQSGFFWRHELLEEYDWYWRVEPDIKLYCDINYDVFKWMQ 162 (339)
T ss_dssp SSCCTTSCHHHHHHHHHHHTTTST-TTTCHHHHHHHH---HHHHTGGGSGGGTTCSEEEECCTTCEECSCCCSCHHHHHH
T ss_pred cCCCCCcCHHHHHHHHHhhhccCc-cccccchhHHHH---HhhcccccchhhhccceEEEeCCCcEEecCCCCCHHHHHh
Confidence 1000 0111 123345655555 222233332 259999999999854 579999887
Q ss_pred H
Q 012941 233 A 233 (453)
Q Consensus 233 ~ 233 (453)
.
T Consensus 163 ~ 163 (339)
T d1s4na_ 163 E 163 (339)
T ss_dssp H
T ss_pred h
Confidence 6
No 10
>d1ykhb1 a.252.1.1 (B:2-130) RNA polymerase II holoenzyme component SRB7 (MED21) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=24.36 E-value=99 Score=24.51 Aligned_cols=49 Identities=18% Similarity=0.185 Sum_probs=30.4
Q ss_pred hHHHHHHHHhhhhhhHHHHHHHHHHH-------HhhhhhhHhHHHHhhhhhHHhHH
Q 012941 42 YADRVAAAVEAENHCTNQMRLLIDQI-------SMQQGRIVALEDEKKRRDEECGQ 90 (453)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 90 (453)
|.+........=-.+.+++-.||+.+ ..|..+|..||+++...+++..+
T Consensus 54 f~~~~~elA~dii~kakqId~LI~sLP~~~~see~Q~~~i~~Le~E~~~~~~el~~ 109 (129)
T d1ykhb1 54 FSNTIDELSTDIILKTRQINKLIDSLPGVDVSAEEQLRKIDMLQKKLVEVEDEKIE 109 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSTTTTCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34443333334455678888899887 23566677787777766665543
No 11
>d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.02 E-value=17 Score=30.40 Aligned_cols=42 Identities=7% Similarity=0.070 Sum_probs=34.9
Q ss_pred EEEecCchHHHHHHHHHHHhccCCCCCCccEEEeeCCCChhHHHHHhhcC
Q 012941 118 VIMACNRANYLERTINSVFKYQGSVASKYPLFVSQDGSNPQVKSKALSYD 167 (453)
Q Consensus 118 lI~a~NRP~~l~R~LesL~k~~~~~~~~~~LiVsqDG~~~et~~vi~s~~ 167 (453)
-..++.||- +...|+.+.+. |+|+|+.-|...-++.+++.++
T Consensus 51 ~~~v~~RP~-l~eFL~~l~~~-------yei~I~Ta~~~~YA~~il~~ld 92 (181)
T d1ta0a_ 51 QVYVLKRPH-VDEFLQRMGEL-------FECVLFTASLAKYADPVADLLD 92 (181)
T ss_dssp EEEEEECTT-HHHHHHHHHHH-------SEEEEECSSCHHHHHHHHHHHC
T ss_pred eeEEecCCC-HHHHHHHHHhc-------eEEEEEcCCcHHHHHHHHHHhc
Confidence 356788999 89999999883 5899999999887888888775
Done!