Query 012942
Match_columns 453
No_of_seqs 275 out of 2077
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 19:13:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012942.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012942hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3o0f_A Putative metal-dependen 100.0 6.9E-62 2.4E-66 486.6 31.6 270 70-369 10-286 (301)
2 2yb1_A Amidohydrolase; HET: AM 100.0 4.1E-52 1.4E-56 413.4 28.0 260 72-359 1-264 (292)
3 3e38_A Two-domain protein cont 100.0 5.5E-28 1.9E-32 245.7 16.1 164 70-346 16-198 (343)
4 2yxo_A Histidinol phosphatase; 99.9 2.2E-23 7.7E-28 201.2 13.7 188 74-347 1-229 (267)
5 1m65_A Hypothetical protein YC 99.9 3.1E-23 1E-27 198.1 13.5 184 72-347 1-197 (245)
6 2anu_A Hypothetical protein TM 99.9 7.9E-23 2.7E-27 198.3 11.9 159 70-347 17-210 (255)
7 3qy7_A Tyrosine-protein phosph 99.7 1.7E-18 5.8E-23 169.7 9.6 179 74-348 1-200 (262)
8 2wje_A CPS4B, tyrosine-protein 99.7 2.8E-18 9.6E-23 165.5 9.9 181 73-347 4-208 (247)
9 2w9m_A Polymerase X; SAXS, DNA 99.7 1.8E-17 6.2E-22 178.8 15.7 176 70-347 324-521 (578)
10 2hnh_A DNA polymerase III alph 99.7 2.2E-17 7.4E-22 185.8 15.9 94 73-172 5-100 (910)
11 2hpi_A DNA polymerase III alph 99.7 8.2E-16 2.8E-20 176.3 18.2 101 72-174 5-114 (1220)
12 3b0x_A DNA polymerase beta fam 99.6 2.3E-15 8E-20 162.2 17.5 70 71-140 335-418 (575)
13 3f2b_A DNA-directed DNA polyme 99.5 2E-14 6.7E-19 162.8 10.6 136 39-176 71-227 (1041)
14 3dcp_A Histidinol-phosphatase; 99.4 1.9E-12 6.6E-17 128.0 15.0 68 73-140 1-98 (283)
15 1v77_A PH1877P, hypothetical p 98.6 2.1E-07 7.3E-12 87.9 12.0 55 72-139 7-62 (212)
16 2y1h_A Putative deoxyribonucle 93.3 0.13 4.4E-06 48.8 6.5 62 71-133 3-64 (272)
17 1zzm_A Putative deoxyribonucle 90.8 0.41 1.4E-05 44.8 6.8 55 72-127 3-57 (259)
18 3rcm_A TATD family hydrolase; 88.3 0.35 1.2E-05 47.3 4.2 54 72-126 1-54 (287)
19 1xwy_A DNAse TATD, deoxyribonu 88.1 0.58 2E-05 43.9 5.5 55 72-127 3-57 (264)
20 3gg7_A Uncharacterized metallo 87.1 0.29 9.9E-06 47.1 2.8 50 72-126 1-50 (254)
21 1yix_A Deoxyribonuclease YCFH; 86.5 0.55 1.9E-05 43.9 4.3 55 72-127 1-58 (265)
22 2xio_A Putative deoxyribonucle 85.4 0.6 2.1E-05 45.3 4.1 55 72-127 1-65 (301)
23 2gzx_A Putative TATD related D 85.2 1.2 4E-05 41.5 5.8 54 73-127 1-54 (265)
24 3ipw_A Hydrolase TATD family p 78.5 1.5 5.2E-05 43.7 4.1 56 70-126 24-89 (325)
25 1j6o_A TATD-related deoxyribon 73.8 1.6 5.5E-05 41.3 2.7 56 71-127 10-65 (268)
26 4gbu_A NADPH dehydrogenase 1; 71.1 5.8 0.0002 40.4 6.3 24 253-276 97-122 (400)
27 2vc7_A Aryldialkylphosphatase; 69.7 4.1 0.00014 38.9 4.6 64 72-135 16-95 (314)
28 3e2v_A 3'-5'-exonuclease; stru 68.0 4.9 0.00017 41.3 4.9 56 70-126 10-75 (401)
29 3p6l_A Sugar phosphate isomera 66.8 14 0.00048 34.0 7.5 21 278-298 23-43 (262)
30 3lmz_A Putative sugar isomeras 66.7 12 0.00041 34.5 7.0 20 279-298 32-51 (257)
31 3cjp_A Predicted amidohydrolas 61.9 13 0.00045 34.5 6.4 36 72-112 2-37 (272)
32 3ngf_A AP endonuclease, family 61.5 13 0.00045 34.5 6.3 43 278-339 24-66 (269)
33 4a3u_A NCR, NADH\:flavin oxido 61.0 9.1 0.00031 38.3 5.3 23 253-275 80-104 (358)
34 3vni_A Xylose isomerase domain 55.7 16 0.00054 34.1 5.8 44 279-339 19-65 (294)
35 2qul_A D-tagatose 3-epimerase; 55.3 29 0.00098 32.1 7.5 46 278-340 18-66 (290)
36 3gka_A N-ethylmaleimide reduct 53.7 21 0.00073 35.8 6.6 23 253-275 88-112 (361)
37 2q02_A Putative cytoplasmic pr 53.5 29 0.001 31.7 7.1 42 252-293 19-67 (272)
38 2ob3_A Parathion hydrolase; me 53.4 14 0.00049 36.1 5.2 61 72-132 15-92 (330)
39 4i6k_A Amidohydrolase family p 52.3 13 0.00043 35.5 4.5 57 70-126 23-92 (294)
40 3kws_A Putative sugar isomeras 52.3 26 0.00088 32.7 6.6 21 279-299 40-60 (287)
41 4ab4_A Xenobiotic reductase B; 52.3 23 0.00079 35.6 6.6 23 253-275 80-104 (362)
42 4gxw_A Adenosine deaminase; am 50.9 7.1 0.00024 39.6 2.5 29 72-103 29-57 (380)
43 1z41_A YQJM, probable NADH-dep 50.2 24 0.0008 34.8 6.2 23 253-275 84-108 (338)
44 2zvr_A Uncharacterized protein 49.7 16 0.00055 34.2 4.7 45 280-341 44-89 (290)
45 3gr7_A NADPH dehydrogenase; fl 49.5 18 0.00062 35.8 5.2 23 253-275 84-108 (340)
46 3iar_A Adenosine deaminase; pu 49.4 7.7 0.00026 39.1 2.5 29 72-103 6-34 (367)
47 3cqj_A L-ribulose-5-phosphate 49.4 29 0.001 32.4 6.5 54 278-339 31-84 (295)
48 3pao_A Adenosine deaminase; st 48.6 8.3 0.00029 38.2 2.6 29 72-103 10-38 (326)
49 3rys_A Adenosine deaminase 1; 48.6 8.3 0.00028 38.5 2.6 30 71-103 12-41 (343)
50 3kru_A NADH:flavin oxidoreduct 47.8 25 0.00084 35.0 5.9 23 253-275 82-106 (343)
51 1bf6_A Phosphotriesterase homo 47.0 15 0.00053 34.1 4.1 62 73-134 6-80 (291)
52 1k77_A EC1530, hypothetical pr 46.9 23 0.00077 32.3 5.2 43 278-339 16-58 (260)
53 3l5a_A NADH/flavin oxidoreduct 46.8 21 0.0007 36.7 5.3 23 253-275 105-129 (419)
54 3h4u_A Amidohydrolase; signatu 46.6 33 0.0011 34.3 6.8 63 72-136 87-183 (479)
55 2x7v_A Probable endonuclease 4 46.4 45 0.0015 30.7 7.2 42 278-336 13-62 (287)
56 3ngf_A AP endonuclease, family 45.8 54 0.0018 30.2 7.7 49 82-131 17-65 (269)
57 3f4w_A Putative hexulose 6 pho 45.6 42 0.0014 30.0 6.7 65 256-338 42-107 (211)
58 3ktc_A Xylose isomerase; putat 45.0 19 0.00065 34.8 4.5 44 279-339 35-79 (333)
59 3hgj_A Chromate reductase; TIM 44.8 27 0.00093 34.6 5.7 23 253-275 82-106 (349)
60 1icp_A OPR1, 12-oxophytodienoa 44.7 33 0.0011 34.5 6.4 23 253-275 92-116 (376)
61 3dx5_A Uncharacterized protein 44.4 18 0.00061 33.6 4.1 14 252-265 15-28 (286)
62 1qwg_A PSL synthase;, (2R)-pho 44.2 46 0.0016 32.0 6.9 70 254-338 57-131 (251)
63 3l5l_A Xenobiotic reductase A; 43.8 26 0.00089 35.0 5.4 23 253-275 81-105 (363)
64 2hsa_B 12-oxophytodienoate red 42.9 46 0.0016 33.7 7.2 23 253-275 94-118 (402)
65 3k30_A Histamine dehydrogenase 42.3 30 0.001 37.3 5.9 23 253-275 90-114 (690)
66 3aam_A Endonuclease IV, endoiv 42.0 63 0.0022 29.6 7.5 20 279-298 16-35 (270)
67 3qc0_A Sugar isomerase; TIM ba 41.6 9.1 0.00031 35.2 1.5 18 252-269 18-35 (275)
68 3tjl_A NADPH dehydrogenase; OL 41.4 38 0.0013 34.6 6.3 22 254-275 94-117 (407)
69 1k77_A EC1530, hypothetical pr 40.0 35 0.0012 31.0 5.3 56 73-131 2-57 (260)
70 3qxb_A Putative xylose isomera 39.8 42 0.0015 31.8 6.0 49 282-339 40-88 (316)
71 2f6k_A Metal-dependent hydrola 38.7 20 0.0007 33.6 3.5 36 72-107 1-54 (307)
72 1i60_A IOLI protein; beta barr 38.7 38 0.0013 30.9 5.4 15 252-266 14-28 (278)
73 2gou_A Oxidoreductase, FMN-bin 38.6 55 0.0019 32.6 6.9 23 253-275 82-106 (365)
74 3lnp_A Amidohydrolase family p 38.5 55 0.0019 32.6 6.9 62 72-137 86-177 (468)
75 1914_A Signal recognition part 38.3 5.9 0.0002 37.7 -0.4 31 7-37 113-143 (232)
76 3tva_A Xylose isomerase domain 37.9 41 0.0014 31.2 5.5 49 280-345 24-76 (290)
77 2ffi_A 2-pyrone-4,6-dicarboxyl 37.4 17 0.00058 33.9 2.7 57 71-127 11-80 (288)
78 2qw5_A Xylose isomerase-like T 37.1 53 0.0018 31.4 6.3 50 281-340 35-87 (335)
79 3lmz_A Putative sugar isomeras 36.2 54 0.0018 30.0 6.0 59 70-131 15-78 (257)
80 4f0r_A 5-methylthioadenosine/S 36.1 60 0.002 32.0 6.7 62 72-137 64-155 (447)
81 1vyr_A Pentaerythritol tetrani 35.9 48 0.0017 33.0 5.9 23 253-275 82-106 (364)
82 3aal_A Probable endonuclease 4 35.4 96 0.0033 29.0 7.8 44 279-339 20-72 (303)
83 4dyk_A Amidohydrolase; adenosi 35.3 48 0.0016 32.8 5.8 62 72-137 66-157 (451)
84 3dz1_A Dihydrodipicolinate syn 35.1 88 0.003 30.4 7.6 83 264-369 74-160 (313)
85 3vni_A Xylose isomerase domain 34.6 46 0.0016 30.9 5.3 60 73-132 2-65 (294)
86 3cny_A Inositol catabolism pro 34.5 33 0.0011 31.9 4.2 44 251-296 30-74 (301)
87 3guw_A Uncharacterized protein 34.5 14 0.00049 35.2 1.6 34 73-111 1-34 (261)
88 2z00_A Dihydroorotase; zinc bi 34.4 38 0.0013 33.1 4.8 61 72-132 49-117 (426)
89 3obe_A Sugar phosphate isomera 34.0 49 0.0017 31.5 5.4 14 253-266 37-50 (305)
90 4dzh_A Amidohydrolase; adenosi 33.5 67 0.0023 32.2 6.7 62 72-137 73-164 (472)
91 2r14_A Morphinone reductase; H 33.5 51 0.0017 33.1 5.6 23 253-275 86-110 (377)
92 1qtw_A Endonuclease IV; DNA re 33.4 77 0.0026 29.0 6.6 44 277-337 12-63 (285)
93 3kws_A Putative sugar isomeras 33.2 61 0.0021 30.0 5.9 56 72-130 25-80 (287)
94 2pgf_A Adenosine deaminase; me 33.2 25 0.00084 35.1 3.2 29 72-103 44-72 (371)
95 2qul_A D-tagatose 3-epimerase; 32.8 55 0.0019 30.1 5.4 45 88-132 17-65 (290)
96 2hk0_A D-psicose 3-epimerase; 32.7 33 0.0011 32.4 3.9 45 279-341 39-86 (309)
97 3jr2_A Hexulose-6-phosphate sy 32.3 52 0.0018 29.9 5.1 52 72-130 61-112 (218)
98 1o94_A Tmadh, trimethylamine d 32.2 44 0.0015 36.3 5.3 23 253-275 85-109 (729)
99 3nqb_A Adenine deaminase 2; PS 32.2 16 0.00056 39.0 1.8 59 72-133 89-153 (608)
100 3u0h_A Xylose isomerase domain 32.0 17 0.00058 33.5 1.7 15 252-266 16-30 (281)
101 2g0w_A LMO2234 protein; putati 31.3 33 0.0011 32.3 3.7 14 252-265 36-49 (296)
102 3ur8_A Glucan endo-1,3-beta-D- 31.0 74 0.0025 31.5 6.3 47 85-136 12-58 (323)
103 1ps9_A 2,4-dienoyl-COA reducta 30.9 44 0.0015 35.7 5.0 23 253-275 82-106 (671)
104 2zds_A Putative DNA-binding pr 30.9 1.1E+02 0.0038 28.8 7.4 52 278-339 16-69 (340)
105 1vhc_A Putative KHG/KDPG aldol 30.7 2.2E+02 0.0076 26.2 9.2 48 252-300 5-52 (224)
106 1nvm_A HOA, 4-hydroxy-2-oxoval 30.7 2.6E+02 0.009 27.2 10.3 115 191-344 20-144 (345)
107 2q02_A Putative cytoplasmic pr 30.5 1.1E+02 0.0036 27.8 7.0 45 86-130 17-67 (272)
108 1i60_A IOLI protein; beta barr 30.4 1E+02 0.0034 28.0 6.8 45 87-131 13-63 (278)
109 2d73_A Alpha-glucosidase SUSB; 30.2 1.8E+02 0.006 32.1 9.5 82 250-349 416-512 (738)
110 2ood_A BLR3880 protein; PSI-II 29.9 54 0.0019 33.1 5.2 63 72-136 73-166 (475)
111 3fkr_A L-2-keto-3-deoxyarabona 29.8 1.1E+02 0.0038 29.7 7.2 82 264-369 75-162 (309)
112 3l23_A Sugar phosphate isomera 29.7 43 0.0015 31.8 4.2 45 279-340 31-78 (303)
113 1wa3_A 2-keto-3-deoxy-6-phosph 29.7 77 0.0026 28.1 5.7 41 88-134 71-111 (205)
114 3jx9_A Putative phosphoheptose 29.6 26 0.00088 31.6 2.4 28 85-112 87-116 (170)
115 4e38_A Keto-hydroxyglutarate-a 29.1 2.2E+02 0.0075 26.6 8.9 46 254-300 24-69 (232)
116 3s5o_A 4-hydroxy-2-oxoglutarat 28.5 1.9E+02 0.0064 27.9 8.6 95 252-369 64-168 (307)
117 1bxb_A Xylose isomerase; xylos 28.1 74 0.0025 31.5 5.8 48 278-338 34-86 (387)
118 1olt_A Oxygen-independent copr 27.6 88 0.003 31.9 6.3 55 238-296 109-169 (457)
119 3kts_A Glycerol uptake operon 26.1 1.8E+02 0.006 26.6 7.4 63 250-338 39-105 (192)
120 3mpg_A Dihydroorotase, dhoase; 26.0 1.3E+02 0.0045 29.5 7.2 56 72-127 53-115 (428)
121 2wvv_A Alpha-L-fucosidase; alp 25.9 65 0.0022 33.2 5.0 52 85-138 75-147 (450)
122 1xim_A D-xylose isomerase; iso 25.6 70 0.0024 31.7 5.1 51 279-342 35-91 (393)
123 3a24_A Alpha-galactosidase; gl 25.5 1.6E+02 0.0054 31.9 8.1 81 251-349 346-429 (641)
124 2zds_A Putative DNA-binding pr 25.4 1.4E+02 0.0048 28.1 7.0 44 87-130 14-67 (340)
125 3em5_A Beta-1,3-glucanase; gly 25.3 95 0.0032 30.6 5.8 46 85-135 11-56 (316)
126 4do7_A Amidohydrolase 2; enzym 25.3 65 0.0022 30.6 4.6 56 72-127 3-74 (303)
127 3cqj_A L-ribulose-5-phosphate 24.4 74 0.0025 29.5 4.7 46 86-131 28-83 (295)
128 3aal_A Probable endonuclease 4 24.1 1.9E+02 0.0064 27.0 7.6 55 72-129 5-68 (303)
129 4e38_A Keto-hydroxyglutarate-a 23.8 77 0.0026 29.8 4.6 44 87-135 92-135 (232)
130 3tha_A Tryptophan synthase alp 23.5 95 0.0033 29.6 5.3 79 229-335 59-142 (252)
131 1xrt_A Dihydroorotase, dhoase; 23.4 1.1E+02 0.0038 30.5 6.2 61 72-132 100-168 (467)
132 1yx1_A Hypothetical protein PA 22.9 65 0.0022 29.5 3.9 16 253-268 24-39 (264)
133 2ekc_A AQ_1548, tryptophan syn 22.9 1.2E+02 0.0042 28.4 6.0 21 281-301 35-55 (262)
134 2yxb_A Coenzyme B12-dependent 22.7 1.4E+02 0.0048 25.9 5.9 49 85-133 53-106 (161)
135 2zxd_A Alpha-L-fucosidase, put 22.7 1.5E+02 0.0053 30.5 7.1 52 84-137 101-173 (455)
136 2dvt_A Thermophilic reversible 22.5 2E+02 0.0068 26.8 7.4 15 325-339 149-163 (327)
137 2g0w_A LMO2234 protein; putati 22.4 1.1E+02 0.0038 28.5 5.6 46 87-132 35-86 (296)
138 2d59_A Hypothetical protein PH 22.3 1.1E+02 0.0039 25.9 5.1 38 91-131 91-128 (144)
139 3u0h_A Xylose isomerase domain 21.6 43 0.0015 30.6 2.4 57 72-131 3-64 (281)
140 2gwg_A 4-oxalomesaconate hydra 21.3 3.1E+02 0.011 26.2 8.7 67 257-338 96-176 (350)
141 2czd_A Orotidine 5'-phosphate 21.3 74 0.0025 28.7 3.9 55 71-138 52-106 (208)
142 1muw_A Xylose isomerase; atomi 21.1 96 0.0033 30.6 5.0 49 279-340 35-88 (386)
143 3cny_A Inositol catabolism pro 21.1 1.2E+02 0.0043 27.8 5.6 45 86-132 29-73 (301)
144 4h41_A Putative alpha-L-fucosi 21.1 1E+02 0.0035 30.7 5.1 51 87-137 50-123 (340)
145 3flu_A DHDPS, dihydrodipicolin 20.9 2.5E+02 0.0085 26.8 7.8 95 252-369 57-159 (297)
146 2f6k_A Metal-dependent hydrola 20.8 1.7E+02 0.0057 27.1 6.5 68 256-338 79-152 (307)
147 3t7v_A Methylornithine synthas 20.7 1.4E+02 0.0048 28.9 6.0 40 254-295 128-167 (350)
148 2i9u_A Cytosine/guanine deamin 20.5 1.2E+02 0.0042 29.7 5.7 41 94-136 119-161 (439)
149 3m5v_A DHDPS, dihydrodipicolin 20.4 2.8E+02 0.0096 26.5 8.1 95 252-369 57-160 (301)
150 3mdu_A N-formimino-L-glutamate 20.3 1.8E+02 0.0061 28.9 6.9 63 72-134 50-156 (453)
151 2yxg_A DHDPS, dihydrodipicolin 20.2 2.6E+02 0.0091 26.5 7.8 37 265-301 68-106 (289)
152 3gri_A Dihydroorotase, dhoase; 20.2 1.4E+02 0.0048 29.5 6.0 57 72-128 52-115 (424)
153 2ehh_A DHDPS, dihydrodipicolin 20.0 2.9E+02 0.01 26.2 8.1 37 265-301 68-106 (294)
No 1
>3o0f_A Putative metal-dependent phosphoesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: AMP; 1.94A {Bifidobacterium adolescentis} PDB: 3e0f_A*
Probab=100.00 E-value=6.9e-62 Score=486.60 Aligned_cols=270 Identities=30% Similarity=0.461 Sum_probs=248.3
Q ss_pred CCceeEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcCCeEEeEEEEEeeeCCCCCCCCC
Q 012942 70 DNNVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVEISTIFCQSRGSESE 149 (453)
Q Consensus 70 ~~~~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~IAITDHdt~~g~~e~~~~a~~~gi~vI~GiEis~~~~~~~~~~~~ 149 (453)
.+.|++||||||+||||..+|++++++|+++|++.|||||||++.|+.++.+++++.||++|+|+||++.+.+
T Consensus 10 ~m~~~~DLH~Hs~~SDG~~~~~elv~~A~~~Gl~~iaiTDH~~~~g~~~~~~~~~~~gi~~i~GvEis~~~~~------- 82 (301)
T 3o0f_A 10 PPAQGWDIHCHTVFSDGTETPRTLVEQARKLGLHGVAIADHDTTAGWDEATEASEEIGLPLLLGTEITAVDED------- 82 (301)
T ss_dssp CCSSSEEEEECCTTTTCSSCHHHHHHHHHHTTCSEEEECCBTCCTTHHHHHHHHHHHTCCEEEEEEEEEEETT-------
T ss_pred cccceEEeeECCCCCCCCCCHHHHHHHHHHcCCCEEEEcCCCccccHHHHHHHHHhcCCEEEEEEEEEEEeCC-------
Confidence 4568999999999999999999999999999999999999999999999999999999999999999999864
Q ss_pred CcEEEEEEeccCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCC--CCCCHHHHHHHHHHcCc
Q 012942 150 EPVHILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMILKLNKLKLPLKWEHVAKIAGKG--VAPGRLHVARAMVEAGH 227 (453)
Q Consensus 150 ~~vHILgYg~d~~~~~~~~L~~~L~~ir~~R~~R~~~iv~kL~~~Gi~i~~E~v~~~ag~~--~~~gr~hia~aLv~~G~ 227 (453)
.++|||||++|. ..+.|.++|+.+++.|.+|+++|+++|++. ++++||++.++++++ ..+||||||++|+++||
T Consensus 83 ~~vHiL~~~~d~---~~~~l~~~l~~~~~~R~~R~~~i~~~L~~~-~~i~~e~v~~~a~~~~~~~igR~HiA~~Lv~~G~ 158 (301)
T 3o0f_A 83 VSVHMLAFQYDP---SNEHISSMFANTRAARLRRTKRMVERLSQD-FPITWDDVLAQVKEGERTTIGRPHIADALVAAGV 158 (301)
T ss_dssp EEEEEEEESCCT---TCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-SSCCHHHHHTTCTTGGGSCCCHHHHHHHHHHTTS
T ss_pred ceEEEEEEcCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHHHHHHHhcCCCCCCcCHHHHHHHHHHcCC
Confidence 589999999974 358899999999999999999999999999 999999998887542 46899999999999999
Q ss_pred cccHHHHHHHHhhCCCCccccCCCCCHHHHHHHHHHcCCEEEEeCCCCCC-----ChHHHHHHHHHcCCcEEEEeCCCCC
Q 012942 228 VENLKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALK-----NPAAIIRKLKDVGLHGLEVYRSDGK 302 (453)
Q Consensus 228 ~~~~~~aF~~yl~~g~p~yv~~~~~~~eeaI~~I~~aGGvaVLAHP~~~~-----~~~~li~~l~~~GldGIEV~~~~~~ 302 (453)
+.+.+++|++||++++|+|||..+++++|+|++|+++||++|||||+++. ...+++.+|++.|+|||||||++++
T Consensus 159 ~~~~~~aF~~~l~~g~~~yV~~~~~~~~eaI~~I~~aGGvaVLAHP~r~~~~r~~~~~~~l~~l~~~GldgIEv~~~~~~ 238 (301)
T 3o0f_A 159 YETRSDAFADAVSAKSKYYIPTPSPSTHEVIAAVKGAGGVVVAAHAGDPQRNRRLLSDEQLDAMIADGLDGLEVWHRGNP 238 (301)
T ss_dssp CSSHHHHHTTTTSTTSTTCCCCCCCBHHHHHHHHHHTTCEEEECSTTCTTTCSSCCCHHHHHHHHHHTCCEEEEESTTSC
T ss_pred CCCHHHHHHHHHcCCCccccCccCCCHHHHHHHHHHCCCEEEecChhhhccccccCcHHHHHHHHHCCCCEEEEeCCCCC
Confidence 99999999999999999999999999999999999999999999998753 3467899999999999999999999
Q ss_pred hhhhhhhhhhhhHHHHHhHHHHHHHHHHHHcCCeeeeccCCCCCCCCCCcccCCccCChhHHHHHhc
Q 012942 303 LVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLGGSDYHGRGGHGESELGSVKLPVLVLNDFLK 369 (453)
Q Consensus 303 ~~~~~~~~~~~n~~~l~~~~~~~~~~lA~~~gLl~tgGSDfHg~~~~~~~~lG~~~~p~~~~~~~~~ 369 (453)
..+.+ ++.++|+++||++|||||||++.+ +.+||.+.+|.+.++.|.+
T Consensus 239 ~~~~~-----------------~~~~lA~~~gL~~tgGSD~Hg~~~--~~~lG~~~~~~~~~~~l~~ 286 (301)
T 3o0f_A 239 PEQRE-----------------RLLTIAARHDLLVTGGSDWHGKGK--PNGLGENLTDDDTVREILC 286 (301)
T ss_dssp HHHHH-----------------HHHHHHHHHTCEEEECCCBCGGGS--SCCTTSSCBCHHHHHHHHH
T ss_pred HHHHH-----------------HHHHHHHHcCCceEEEcCCCCCCC--CCcCCCcCCCHHHHHHHHH
Confidence 88765 788999999999999999999753 5789999999987777665
No 2
>2yb1_A Amidohydrolase; HET: AMP; 1.90A {Chromobacterium violaceum} PDB: 2yb4_A
Probab=100.00 E-value=4.1e-52 Score=413.45 Aligned_cols=260 Identities=32% Similarity=0.481 Sum_probs=232.9
Q ss_pred ceeEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcCCeEEeEEEEEeeeCCCCCCCCCCc
Q 012942 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVEISTIFCQSRGSESEEP 151 (453)
Q Consensus 72 ~~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~IAITDHdt~~g~~e~~~~a~~~gi~vI~GiEis~~~~~~~~~~~~~~ 151 (453)
|+++||||||.+|||..+|++++++|++.|++.|||||||++.|+.++.+++++.||++|+|+|+++.+.+ .+
T Consensus 1 M~~~DLH~Ht~~SDg~~~~~elv~~A~~~Gl~~iaiTDH~~~~g~~~~~~~~~~~gi~vi~G~Ei~~~~~~-------~~ 73 (292)
T 2yb1_A 1 MANIDLHFHSRTSDGALTPTEVIDRAAARAPALLALTDHDCTGGLAEAAAAAARRGIPFLNGVEVSVSWGR-------HT 73 (292)
T ss_dssp -CCEECCBCCTTTTCSSCHHHHHHHHHTTCCSEEEECCBTCCTTHHHHHHHHHHTTCCEEEEEEEEEEETT-------EE
T ss_pred CCccccccCCCccCCCCCHHHHHHHHHHCCCCEEEEecCCccccHHHHHHHHHHcCCEEEEEEEEEEecCC-------ce
Confidence 57899999999999999999999999999999999999999999999999988899999999999998753 36
Q ss_pred EEEEEEeccCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCCCCCCHHHHHHHHHHcCccccH
Q 012942 152 VHILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMILKLNKLKLPLKWEHVAKIAGKGVAPGRLHVARAMVEAGHVENL 231 (453)
Q Consensus 152 vHILgYg~d~~~~~~~~L~~~L~~ir~~R~~R~~~iv~kL~~~Gi~i~~E~v~~~ag~~~~~gr~hia~aLv~~G~~~~~ 231 (453)
+|+|+|++|. ..+.+.+++..+++.|.+|+++|+++|++.|++++++++..+++++..+||||||++|++.|++.+.
T Consensus 74 ~hil~~~~d~---~~~~l~~~~~~~~~~r~~r~~~~~~~l~~~g~~~~~~~v~~~a~~~~~igr~H~a~~lv~~g~~~~~ 150 (292)
T 2yb1_A 74 VHIVGLGIDP---AEPALAAGLKSIREGRLERARQMGASLEAAGIAGCFDGAMRWCDNPEMISRTHFARHLVDSGAVKDM 150 (292)
T ss_dssp EEEEEESCCT---TCHHHHHHHHHHHTTHHHHHHHHHHHHHHTTCTTHHHHHHTTCSSGGGCCHHHHHHHHHHTTSSSSH
T ss_pred eEEEEEecCc---ccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCHHHHHHhccCCCCcCHHHHHHHHHHcCCcCCH
Confidence 8999999874 2367899999999999999999999999999999999998876655568999999999999999999
Q ss_pred HHHHHHHhhCCCCccccCCCCCHHHHHHHHHHcCCEEEEeCCCCCCCh----HHHHHHHHHcCCcEEEEeCCCCChhhhh
Q 012942 232 KQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALKNP----AAIIRKLKDVGLHGLEVYRSDGKLVDVN 307 (453)
Q Consensus 232 ~~aF~~yl~~g~p~yv~~~~~~~eeaI~~I~~aGGvaVLAHP~~~~~~----~~li~~l~~~GldGIEV~~~~~~~~~~~ 307 (453)
.++|++||+.++|+|++..+++++++|++|+++||++|+|||+++... .++++++++.|++||||+++.++..+..
T Consensus 151 ~~~f~~yl~~~~~~~v~~~~~~~~~~i~~i~~~Gg~~VlAHP~r~~~~~~~~~~~l~~l~~~g~~giEv~~~~~~~~~~~ 230 (292)
T 2yb1_A 151 RTVFRKYLTPGKPGYVSHQWASLEDAVGWIVGAGGMAVIAHPGRYDMGRTLIERLILDFQAAGGQGIEVASGSHSLDDMH 230 (292)
T ss_dssp HHHHHHSSSTTSTTCCCCCCBCHHHHHHHHHHTTCEEEECCGGGSSCCHHHHHHHHHHHHHTTCCEEEEEETTCCHHHHH
T ss_pred HHHHHHHHccCCceeccCCCCCHHHHHHHHHHcCCEEEEECcCccccchhhHHHHHHHHHhCCCCEEEEeCCCCCHHHHH
Confidence 999999999999999999999999999999999999999999987632 4677788899999999999998865433
Q ss_pred hhhhhhhHHHHHhHHHHHHHHHHHHcCCeeeeccCCCCCCCCCCcccCCccC
Q 012942 308 FLEKIDNFLLLLCLRQITYTDLADTYGLLKLGGSDYHGRGGHGESELGSVKL 359 (453)
Q Consensus 308 ~~~~~~n~~~l~~~~~~~~~~lA~~~gLl~tgGSDfHg~~~~~~~~lG~~~~ 359 (453)
.+.++|+++||++|+|||||++.+ ++..+|...+
T Consensus 231 -----------------~~~~~a~~~gl~~t~GSDaH~~~~-~~~~lG~~~~ 264 (292)
T 2yb1_A 231 -----------------KFALHADRHGLYASSGSDFHAPGE-GGRDVGHTED 264 (292)
T ss_dssp -----------------HHHHHHHHHTCEEEEECCBCSTTC----CTTCCCC
T ss_pred -----------------HHHHHHHHcCCceEEeeCCCCcCC-CCCcCCCCCC
Confidence 688999999999999999999864 3568998743
No 3
>3e38_A Two-domain protein containing predicted PHP-like dependent phosphoesterase; structural genomics; 2.20A {Bacteroides vulgatus atcc 8482}
Probab=99.95 E-value=5.5e-28 Score=245.66 Aligned_cols=164 Identities=25% Similarity=0.323 Sum_probs=133.8
Q ss_pred CCceeEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecC------------CCCCCHHHHHHHHHhcCCeEEeEEEEE
Q 012942 70 DNNVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDH------------DTMSGIPEAIETARRFGMKIIPGVEIS 137 (453)
Q Consensus 70 ~~~~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~IAITDH------------dt~~g~~e~~~~a~~~gi~vI~GiEis 137 (453)
..||++|||+||.||||..+|++++++|++.|++.|||||| |++.++.++.+.+++.||.+|||+||+
T Consensus 16 ~~~~~~DlH~Ht~~SDg~~~~~elv~~A~~~Gl~~iaiTDH~~~~~~~~~~~~d~~~g~~~~~~~a~~~gi~vi~G~Ei~ 95 (343)
T 3e38_A 16 YTTLKCDFHMHSVFSDGLVWPTVRVDEAYRDGLDAISLTEHIEYRPHKQDVVSDHNRSFDLCREQAEKLGILLIKGSEIT 95 (343)
T ss_dssp CEEEEEECCBCCTTTTCSBCHHHHHHHHHHTTCSEECCEEESSCCTTTTTBCCCTTHHHHHHHHHHHHHTCEECCEEEEE
T ss_pred CCEEEEECCCCCCCCCCCCCHHHHHHHHHHcCCCEEEECCCCcccccccccchhHHHHHHHHHHHHHhCCCEEEEEEEEE
Confidence 55999999999999999999999999999999999999999 566788899888888999999999999
Q ss_pred eeeCCCCCCCCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCCCCCCHHH
Q 012942 138 TIFCQSRGSESEEPVHILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMILKLNKLKLPLKWEHVAKIAGKGVAPGRLH 217 (453)
Q Consensus 138 ~~~~~~~~~~~~~~vHILgYg~d~~~~~~~~L~~~L~~ir~~R~~R~~~iv~kL~~~Gi~i~~E~v~~~ag~~~~~gr~h 217 (453)
+.+ +.+|+|+|+.+.. .
T Consensus 96 ~~~---------~~gHiL~l~~~~~----~-------------------------------------------------- 112 (343)
T 3e38_A 96 RAM---------APGHFNAIFLSDS----N-------------------------------------------------- 112 (343)
T ss_dssp CST---------TTCEEEEESCSCS----G--------------------------------------------------
T ss_pred EcC---------CCcEEEEEeCCCC----C--------------------------------------------------
Confidence 863 3689999987410 0
Q ss_pred HHHHHHHcCccccHHHHHHHHhhCCCCccccCCCCCHHHHHHHHHHcCCEEEEeCCCCCCC-h-----HHHHHHH-HHcC
Q 012942 218 VARAMVEAGHVENLKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALKN-P-----AAIIRKL-KDVG 290 (453)
Q Consensus 218 ia~aLv~~G~~~~~~~aF~~yl~~g~p~yv~~~~~~~eeaI~~I~~aGGvaVLAHP~~~~~-~-----~~li~~l-~~~G 290 (453)
+....+++++++.|++.||++|+|||++... . ...+.++ ...+
T Consensus 113 ------------------------------~~~~~~~~eli~~v~~~Ggl~iiAHP~r~~~~~~g~~~~~~~~e~l~~~~ 162 (343)
T 3e38_A 113 ------------------------------PLEQKDYKDAFREAKKQGAFMFWNHPGWDSQQPDTTKWWPEHTALYQEGC 162 (343)
T ss_dssp ------------------------------GGCCSSHHHHHHHHHHTTCEEEECCTTCTTTSSSCCCCCHHHHHHHHTTC
T ss_pred ------------------------------CCcccCHHHHHHHHHHCCCEEEEeCCCCcccCccccccccchHHHhcccC
Confidence 0012478999999999999999999998531 1 0113333 3479
Q ss_pred CcEEEEeCCCCChhhhhhhhhhhhHHHHHhHHHHHHHHHHHHcCCeeeeccCCCCC
Q 012942 291 LHGLEVYRSDGKLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLGGSDYHGR 346 (453)
Q Consensus 291 ldGIEV~~~~~~~~~~~~~~~~~n~~~l~~~~~~~~~~lA~~~gLl~tgGSDfHg~ 346 (453)
+|||||||+....+ +...+|+.++|..+||||+|++
T Consensus 163 iDaIEv~N~~~~n~--------------------~A~~la~~~~l~~~~GSDaH~~ 198 (343)
T 3e38_A 163 MHGIEVANGHLYMP--------------------EAIQWCLDKNLTMIGTSDIHQP 198 (343)
T ss_dssp CSEEEEEETTEECT--------------------HHHHHHHHHTCEEEEECCBCSC
T ss_pred ccEEEEcCCCCccH--------------------HHHHHHhhCCCceEeECCCCCC
Confidence 99999999874211 3457899999999999999997
No 4
>2yxo_A Histidinol phosphatase; metal-dependent, hydrolase; 1.60A {Thermus thermophilus} PDB: 2yz5_A 2z4g_A
Probab=99.90 E-value=2.2e-23 Score=201.23 Aligned_cols=188 Identities=19% Similarity=0.207 Sum_probs=123.2
Q ss_pred eEceeeeCcCC-CCCCCHHHHHHHHHHcCCcEEEEecCCCCC-------C---------HHHHHHHHHhc-CCeEEeEEE
Q 012942 74 VFELHSHSNFS-DGYLSPSKLVERAHCNGVKVLALTDHDTMS-------G---------IPEAIETARRF-GMKIIPGVE 135 (453)
Q Consensus 74 ~~DLH~HT~~S-DG~~tp~elv~~A~~~Gl~~IAITDHdt~~-------g---------~~e~~~~a~~~-gi~vI~GiE 135 (453)
++||||||.+| ||..+|++++++|++.|++.||||||+++. + +.++.++.++. +|.+++|+|
T Consensus 1 ~~DlH~Ht~~S~DG~~~~ee~v~~A~~~Gl~~iaiTDH~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~i~i~~G~E 80 (267)
T 2yxo_A 1 MVDSHVHTPLCGHAEGHPEAYLEEARAKGLKGVVFTDHSPMPPWYDPESRMRLEALPFYLLALERVRERAQDLYVGIGLE 80 (267)
T ss_dssp CEEEEECCGGGSSCCSCHHHHHHHHHHTTCSEEEEEEECCCCTTSSGGGSCCGGGHHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred CCccCcCcCCCCCCCCCHHHHHHHHHHcCCCEEEEcCCCCCCcccCccccccHHHHHHHHHHHHHHHHHhcCCcEEEEEE
Confidence 47999999999 999999999999999999999999999987 3 44444555554 999999999
Q ss_pred EEeeeCCCCCCCCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCCCCCCH
Q 012942 136 ISTIFCQSRGSESEEPVHILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMILKLNKLKLPLKWEHVAKIAGKGVAPGR 215 (453)
Q Consensus 136 is~~~~~~~~~~~~~~vHILgYg~d~~~~~~~~L~~~L~~ir~~R~~R~~~iv~kL~~~Gi~i~~E~v~~~ag~~~~~gr 215 (453)
+++.++ . + ..+.++ |...+++. .+++
T Consensus 81 i~~~~~---------~-------~-------~~~~~~------------------l~~~~~d~-------------vi~s 106 (267)
T 2yxo_A 81 ADFHPG---------T-------E-------GFLAQL------------------LRRYPFDY-------------VIGS 106 (267)
T ss_dssp EECCTT---------C-------H-------HHHHHH------------------HHSSCCSC-------------EEEE
T ss_pred eccCCC---------c-------H-------HHHHHH------------------HHhCCCCE-------------EEEe
Confidence 998521 0 1 111111 22211111 1222
Q ss_pred HHHHHHHHHcCcc----------ccHHHHHHHHhhCCCCccccCCCCCHHHHHHHHHHcCCEEEEeCCCCCC---C----
Q 012942 216 LHVARAMVEAGHV----------ENLKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALK---N---- 278 (453)
Q Consensus 216 ~hia~aLv~~G~~----------~~~~~aF~~yl~~g~p~yv~~~~~~~eeaI~~I~~aGGvaVLAHP~~~~---~---- 278 (453)
.|++.. .++. .+..+++.+| .++++++|+. ||++|+|||.++. .
T Consensus 107 ~H~~~~---~~~~~~~~~~~~~~~~~~~~~~~y---------------~~~~~~~i~~-g~~~vlaHp~~~~~~~~~~~~ 167 (267)
T 2yxo_A 107 VHYLGA---WPLDHPDHQEEYAWRDLKEVFRAY---------------FQEVEKAARS-GLFHAIGHLDLPKKFGHRLPE 167 (267)
T ss_dssp CCCBTT---BCTTCGGGGGGGGGSCHHHHHHHH---------------HHHHHHHHTS-SCCSEESCTTGGGTTSCCCCH
T ss_pred eEecCC---cCCCcHHHHHHHhcCCHHHHHHHH---------------HHHHHHHHhc-CCCCEEeCccHHHHhCCCCCh
Confidence 232211 0111 1123333333 3788899986 9999999998632 1
Q ss_pred ------hHHHHHHHHHcCCcEEEEeCCCCChhhhhhhhhhhhHHHHHhHHHHHHHHHHHHcCCeeeeccCCCCCC
Q 012942 279 ------PAAIIRKLKDVGLHGLEVYRSDGKLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLGGSDYHGRG 347 (453)
Q Consensus 279 ------~~~li~~l~~~GldGIEV~~~~~~~~~~~~~~~~~n~~~l~~~~~~~~~~lA~~~gLl~tgGSDfHg~~ 347 (453)
...+++.+++.| .+|||.++......... .....+.++|.++|+.+|+|||+|++.
T Consensus 168 ~~~~~~~~~~l~~~~~~g-~~iEvn~~~~~~~~~~~------------~~~~~~~~~~~~~g~~~~~gSDaH~~~ 229 (267)
T 2yxo_A 168 EALLELAEPALRAVAEAG-LFLDVNTAGLRRPAKEV------------YPAPALLRRARELGIGLVLGSDAHRPE 229 (267)
T ss_dssp HHHHHHHHHHHHHHHHHT-CEEEEEGGGGGSTTCSC------------BSCHHHHHHHHHHTCCEEEECCBSSGG
T ss_pred HHHHHHHHHHHHHHHHcC-CEEEEEchHhcCCCCCC------------CCCHHHHHHHHHcCCCEEEecCCCCHH
Confidence 124577788888 69999775432110000 001267889999999999999999973
No 5
>1m65_A Hypothetical protein YCDX; structural genomics, beta-alpha-barrel, metallo-enzyme, STRU function project, S2F, unknown function; 1.57A {Escherichia coli} SCOP: c.6.3.1 PDB: 1m68_A 1pb0_A
Probab=99.89 E-value=3.1e-23 Score=198.12 Aligned_cols=184 Identities=21% Similarity=0.230 Sum_probs=119.5
Q ss_pred ceeEceeeeCcCC-CCCCCHHHHHHHHHHcCCcEEEEecCCC-CCCHHH--HH---HHH--HhcCCeEEeEEEEEeeeCC
Q 012942 72 NVVFELHSHSNFS-DGYLSPSKLVERAHCNGVKVLALTDHDT-MSGIPE--AI---ETA--RRFGMKIIPGVEISTIFCQ 142 (453)
Q Consensus 72 ~~~~DLH~HT~~S-DG~~tp~elv~~A~~~Gl~~IAITDHdt-~~g~~e--~~---~~a--~~~gi~vI~GiEis~~~~~ 142 (453)
||++||||||.+| ||..||++++++|++.|++.||||||++ +.+... .. +.+ +..+|.+++|+|+++....
T Consensus 1 m~~~DlH~Ht~~Sd~g~~~~~e~v~~A~~~Gl~~iaiTDH~~~~~~~~~~~~~~~~~~~~~~~~~i~v~~G~Ei~~~~~~ 80 (245)
T 1m65_A 1 MYPVDLHMHTVASTHAYSTLSDYIAQAKQKGIKLFAITDHGPDMEDAPHHWHFINMRIWPRVVDGVGILRGIEANIKNVD 80 (245)
T ss_dssp -CCEECCBCCTTSTTCCCCHHHHHHHHHHHTCCEEEEEEECTTSTTCCCTHHHHGGGGSCSEETTEEEEEEEEEEBCSTT
T ss_pred CCceEeCcCCCCCCCCCCcHHHHHHHHHHCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHhcCCCeEEEEEEeeeeCCC
Confidence 5789999999999 4777999999999999999999999998 655421 11 111 2258999999999986411
Q ss_pred CCCCCCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCCCCCCHHHHHHHH
Q 012942 143 SRGSESEEPVHILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMILKLNKLKLPLKWEHVAKIAGKGVAPGRLHVARAM 222 (453)
Q Consensus 143 ~~~~~~~~~vHILgYg~d~~~~~~~~L~~~L~~ir~~R~~R~~~iv~kL~~~Gi~i~~E~v~~~ag~~~~~gr~hia~aL 222 (453)
.+ ++. ... ++++| .+- ++..
T Consensus 81 ---------~~-----~~~----~~~------------------~~~~l---d~v---------------i~~~------ 100 (245)
T 1m65_A 81 ---------GE-----IDC----SGK------------------MFDSL---DLI---------------IAGF------ 100 (245)
T ss_dssp ---------CC-----BSC----CHH------------------HHHHC---SEE---------------EEEC------
T ss_pred ---------Cc-----hhH----HHH------------------HHhhC---CEE---------------EEee------
Confidence 11 111 011 11111 000 0000
Q ss_pred HHcCccccHHHHHHHHhhCCCCccccCCC-CCHHHHHHHHHHcCCEEEEeCCCCCC---ChHHHHHHHHHcCCcEEEEeC
Q 012942 223 VEAGHVENLKQAFARYLYDGGPAYSTGSE-PLAEVAVQLIHRTGGLAVLAHPWALK---NPAAIIRKLKDVGLHGLEVYR 298 (453)
Q Consensus 223 v~~G~~~~~~~aF~~yl~~g~p~yv~~~~-~~~eeaI~~I~~aGGvaVLAHP~~~~---~~~~li~~l~~~GldGIEV~~ 298 (453)
..++|.+... ..++++++.++ +||++|+|||+++. ....+++.+++.| .+|||.+
T Consensus 101 -------------------h~~~~~~~~~~~~~~~~~~~i~-~g~~~vlaHp~~~~~~~~~~~~~~~~~~~g-~~iEvn~ 159 (245)
T 1m65_A 101 -------------------HEPVFAPHDKATNTQAMIATIA-SGNVHIISHPGNPKYEIDVKAVAEAAAKHQ-VALEINN 159 (245)
T ss_dssp -------------------CTTTSCCCCHHHHHHHHHHHHH-TSCCSEECCTTCTTSCCCHHHHHHHHHHHT-CEEEEET
T ss_pred -------------------cCCccCcchHHHHHHHHHHHHh-CCCCCEEECCCCccchhHHHHHHHHHHHcC-CEEEEEC
Confidence 0011222111 34678899898 99999999998754 2356788888999 7999999
Q ss_pred CCCChhhhhhhhhhhhHHHHHhHHHHHHHHHHHHcCCeeeeccCCCCCC
Q 012942 299 SDGKLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLGGSDYHGRG 347 (453)
Q Consensus 299 ~~~~~~~~~~~~~~~n~~~l~~~~~~~~~~lA~~~gLl~tgGSDfHg~~ 347 (453)
+....... +. ......+.++|+++|+.+|+|||+|++.
T Consensus 160 ~~~~~~~~------g~-----~~~~~~~~~~~~~~g~~~~~gSDaH~~~ 197 (245)
T 1m65_A 160 SSFLHSRK------GS-----EDNCREVAAAVRDAGGWVALGSDSHTAF 197 (245)
T ss_dssp TC---------------------CHHHHHHHHHHHTCCEEEECCBSSGG
T ss_pred CCCcccCC------CC-----CCchHHHHHHHHHcCCEEEEECCCCChH
Confidence 87530000 00 0011267889999999999999999973
No 6
>2anu_A Hypothetical protein TM0559; predicted metal-dependent phosphoesterase (PHP famil structural genomics, joint center for structural genomics; 2.40A {Thermotoga maritima} SCOP: c.6.3.1
Probab=99.88 E-value=7.9e-23 Score=198.33 Aligned_cols=159 Identities=24% Similarity=0.346 Sum_probs=118.1
Q ss_pred CCceeEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCC----CCC---------------HHH--------HHHH
Q 012942 70 DNNVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDT----MSG---------------IPE--------AIET 122 (453)
Q Consensus 70 ~~~~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~IAITDHdt----~~g---------------~~e--------~~~~ 122 (453)
..|+++||||||.+|||..+|++++++|+++|++.||||||+. +.+ +.+ +.++
T Consensus 17 ~~~~~~DlH~Ht~~SDg~~t~ee~v~~A~~~Gl~~i~iTDH~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 96 (255)
T 2anu_A 17 TEWLLCDFHVHTNMSDGHLPLGEVVDLFGKHGVDVVSITDHIVDRRTLEQRKRNGEPLGAITEDKFQDYLKRLWREQKRA 96 (255)
T ss_dssp CEEEEEEEEECCTTTTCSSCHHHHHHHHHHTTCSEEEEEEEEECHHHHHHHHHTTCCCCSCCSTTHHHHHHHHHHHHHHH
T ss_pred CceEEEEEeecCCCcCCCCCHHHHHHHHHHCCCCEEEEcCCCCcccccccccccccccccccHHHHHHHHHHHHHHHHhh
Confidence 5689999999999999999999999999999999999999972 322 211 2223
Q ss_pred HHhcCCeEEeEEEEEeeeCCCCCCCCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCCCCHHH
Q 012942 123 ARRFGMKIIPGVEISTIFCQSRGSESEEPVHILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMILKLNKLKLPLKWEH 202 (453)
Q Consensus 123 a~~~gi~vI~GiEis~~~~~~~~~~~~~~vHILgYg~d~~~~~~~~L~~~L~~ir~~R~~R~~~iv~kL~~~Gi~i~~E~ 202 (453)
++..+|.+++|+|+++.. ..+|+|+++.+.
T Consensus 97 ~~~~~i~v~~G~Ei~~~~---------~~~h~l~~~~~~----------------------------------------- 126 (255)
T 2anu_A 97 WEEYGMILIPGVEITNNT---------DLYHIVAVDVKE----------------------------------------- 126 (255)
T ss_dssp HHHHSCEEEEEEEEEETT---------TTEEEEEESCCS-----------------------------------------
T ss_pred ccccCcEEEEEEEEeeCC---------CCeeEEEecccc-----------------------------------------
Confidence 345699999999999852 379999997531
Q ss_pred HHHHhCCCCCCCHHHHHHHHHHcCccccHHHHHHHHhhCCCCccccCCCCCHHHHHHHHHHcCCEEEEeCCCCCCChHH-
Q 012942 203 VAKIAGKGVAPGRLHVARAMVEAGHVENLKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALKNPAA- 281 (453)
Q Consensus 203 v~~~ag~~~~~gr~hia~aLv~~G~~~~~~~aF~~yl~~g~p~yv~~~~~~~eeaI~~I~~aGGvaVLAHP~~~~~~~~- 281 (453)
| ++ ....++++++.++..|+++|+|||+++.....
T Consensus 127 -----------------------------------~--------~~-~~~~~~~~l~~i~~~g~~~ilaHp~~~~~~~~~ 162 (255)
T 2anu_A 127 -----------------------------------Y--------VD-PSLPVEEIVEKLKEQNALVIAAHPDRKKQDEEH 162 (255)
T ss_dssp -----------------------------------C--------CC-TTSCHHHHHHHHHHTTCEEEECCCCTTC-----
T ss_pred -----------------------------------c--------cC-CCCCHHHHHHHHHHCCCeEEEeCCCcccccccc
Confidence 0 00 01367899999999999999999987643210
Q ss_pred ----HH---HHHHHcCCcEEEEeCCCCChhhhhhhhhhhhHHHHHhHHHHHHHHHHHHcCCeeeeccCCCCCC
Q 012942 282 ----II---RKLKDVGLHGLEVYRSDGKLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLGGSDYHGRG 347 (453)
Q Consensus 282 ----li---~~l~~~GldGIEV~~~~~~~~~~~~~~~~~n~~~l~~~~~~~~~~lA~~~gLl~tgGSDfHg~~ 347 (453)
.. +.+ ...+++|||.++.. +..+|+++|+.+|+|||+|.+.
T Consensus 163 ~~~~~~~~~~~~-~~~~~aiEin~~~~------------------------~~~~~~~~g~~~~~gSDAH~~~ 210 (255)
T 2anu_A 163 LSWYLWANMERF-KDTFDAWEIANRDD------------------------LFNSVGVKKYRYVANSDFHELW 210 (255)
T ss_dssp CCCHHHHSTTTT-TTTCSEEEEEETTE------------------------ECHHHHHTTCCEEEECCBCSGG
T ss_pred ccccccchhhhh-hccCcEEEEcCCCc------------------------hhhHHHHcCCceEeccCCCCCc
Confidence 11 111 23689999998641 1125778999999999999863
No 7
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=99.75 E-value=1.7e-18 Score=169.70 Aligned_cols=179 Identities=17% Similarity=0.196 Sum_probs=116.4
Q ss_pred eEceeeeCcC--CCCCCCHHH---HHHHHHHcCCcEEEEecCCCCCC-----------HHHHHHHHHh--cCCeEEeEEE
Q 012942 74 VFELHSHSNF--SDGYLSPSK---LVERAHCNGVKVLALTDHDTMSG-----------IPEAIETARR--FGMKIIPGVE 135 (453)
Q Consensus 74 ~~DLH~HT~~--SDG~~tp~e---lv~~A~~~Gl~~IAITDHdt~~g-----------~~e~~~~a~~--~gi~vI~GiE 135 (453)
++|+||||.+ |||..|+++ |+++|.+.|++.|++|||..... +.++.+..++ .+|.+++|+|
T Consensus 1 m~D~H~H~~~~~ddG~~~~~~sl~~~~~a~~~G~~~i~~T~H~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~i~I~~G~E 80 (262)
T 3qy7_A 1 MIDIHCHILPAMDDGAGDSADSIEMARAAVRQGIRTIIATPHHNNGVYKNEPAAVREAADQLNKRLIKEDIPLHVLPGQE 80 (262)
T ss_dssp CEESSBCCSTTSSSSCSSHHHHHHHHHHHHHTTCCEEECCCBSEETTEECCHHHHHHHHHHHHHHHHHTTCCCEEECCCE
T ss_pred CEEEeecCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCEEecCeE
Confidence 5899999998 599999997 99999999999999999964221 2223333333 4799999999
Q ss_pred EEeeeCCCCCCCCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCCCCCCH
Q 012942 136 ISTIFCQSRGSESEEPVHILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMILKLNKLKLPLKWEHVAKIAGKGVAPGR 215 (453)
Q Consensus 136 is~~~~~~~~~~~~~~vHILgYg~d~~~~~~~~L~~~L~~ir~~R~~R~~~iv~kL~~~Gi~i~~E~v~~~ag~~~~~gr 215 (453)
+...... ... |.+..+ ..+ .+.
T Consensus 81 v~~~~~~-----------------------~~~----------------------l~~~~~-~~l------~~~------ 102 (262)
T 3qy7_A 81 IRIYGEV-----------------------EQD----------------------LAKRQL-LSL------NDT------ 102 (262)
T ss_dssp EECCTTH-----------------------HHH----------------------HHTTCS-CCG------GGS------
T ss_pred EecchhH-----------------------HHH----------------------HhcCCC-cEE------CCc------
Confidence 9874210 001 110000 000 000
Q ss_pred HHHHHHHHHcCccccHHHHHHHHhhCCCCccccCCCCCHHHHHHHHHHcCCEEEEeCCCCCCC---hHHHHHHHHHcCCc
Q 012942 216 LHVARAMVEAGHVENLKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALKN---PAAIIRKLKDVGLH 292 (453)
Q Consensus 216 ~hia~aLv~~G~~~~~~~aF~~yl~~g~p~yv~~~~~~~eeaI~~I~~aGGvaVLAHP~~~~~---~~~li~~l~~~Gld 292 (453)
+|+--.-|. ......+.++|..|..+|+++|||||.++.. ..+++..+++.|+
T Consensus 103 ---------------------~~vl~e~~~--~~~~~~~~~~l~~i~~~g~v~ILAHPeRy~~~~~~~~~l~~l~~~G~- 158 (262)
T 3qy7_A 103 ---------------------KYILIEFPF--DHVPRYAEQLFYDLQLKGYIPVIAHPERNREIRENPSLLYHLVEKGA- 158 (262)
T ss_dssp ---------------------SEEEEECCT--TCCCTTHHHHHHHHHHTTCEEEEECGGGCHHHHHCTHHHHHHHHTTC-
T ss_pred ---------------------eEEEEeCCC--ccCHHHHHHHHHHHHHCCCcEEEECCCccccccccHHHHHHHHHCCC-
Confidence 000000000 0112468999999999999999999998742 2357888999995
Q ss_pred EEEEeCCCCChhhhhhhhhhhhHHHHHhHHHHHHHHHHHHcCCeeeeccCCCCCCC
Q 012942 293 GLEVYRSDGKLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLGGSDYHGRGG 348 (453)
Q Consensus 293 GIEV~~~~~~~~~~~~~~~~~n~~~l~~~~~~~~~~lA~~~gLl~tgGSDfHg~~~ 348 (453)
++||..+........ ....+...|.++|++.+.|||+|++..
T Consensus 159 ~iEiN~~s~~g~~g~--------------~~~~~~~~~~~~gl~~~igSDaH~~~~ 200 (262)
T 3qy7_A 159 ASQITSGSLAGIFGK--------------QLKAFSLRLVEANLIHFVASDAHNVKT 200 (262)
T ss_dssp EEEEEHHHHHTTTCH--------------HHHHHHHHHHHTTCCCEEECCBCSSSS
T ss_pred EEEEECCccCcccch--------------HHHHHHHHHHhCCCeEEEEccCCCCCC
Confidence 899986532110000 012567788899999999999999853
No 8
>2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A 3qy8_A
Probab=99.74 E-value=2.8e-18 Score=165.53 Aligned_cols=181 Identities=21% Similarity=0.150 Sum_probs=115.7
Q ss_pred eeEceeeeCcCC--CCCCCHH---HHHHHHHHcCCcEEEEecCCCCC----CHH-------HHHHHHHh--cCCeEEeEE
Q 012942 73 VVFELHSHSNFS--DGYLSPS---KLVERAHCNGVKVLALTDHDTMS----GIP-------EAIETARR--FGMKIIPGV 134 (453)
Q Consensus 73 ~~~DLH~HT~~S--DG~~tp~---elv~~A~~~Gl~~IAITDHdt~~----g~~-------e~~~~a~~--~gi~vI~Gi 134 (453)
.++|+||||.+| ||..+++ +++++|.+.|++.|++|||.... ... ++.+..++ .+|.+++|+
T Consensus 4 ~m~D~H~Ht~~~~ddg~~~~e~~~e~i~~A~~~Gi~~i~~TdH~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~i~~G~ 83 (247)
T 2wje_A 4 GMIDIHSHIVFDVDDGPKSREESKALLAESYRQGVRTIVSTSHRRKGMFETPEEKIAENFLQVREIAKEVASDLVIAYGA 83 (247)
T ss_dssp CEEECCBCCSTTSSSSCSSHHHHHHHHHHHHHTTEEEEECCCEEBTTTBCCCHHHHHHHHHHHHHHHHHHCTTCEEECCC
T ss_pred CCEEEecccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCcEEEEee
Confidence 368999999998 8999998 69999999999999999996532 111 12221222 489999999
Q ss_pred EEEeeeCCCCCCCCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCCCCCC
Q 012942 135 EISTIFCQSRGSESEEPVHILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMILKLNKLKLPLKWEHVAKIAGKGVAPG 214 (453)
Q Consensus 135 Eis~~~~~~~~~~~~~~vHILgYg~d~~~~~~~~L~~~L~~ir~~R~~R~~~iv~kL~~~Gi~i~~E~v~~~ag~~~~~g 214 (453)
|+.... .+.+. +.+..+ ..+ .+.
T Consensus 84 E~~~~~---------------------------~~~~~------------------l~~~~~-~~l------~gs----- 106 (247)
T 2wje_A 84 EIYYTP---------------------------DVLDK------------------LEKKRI-PTL------NDS----- 106 (247)
T ss_dssp EEECCT---------------------------HHHHH------------------HHTTCS-CCG------GGS-----
T ss_pred EEeecH---------------------------HHHHH------------------HhcCCc-cEE------CCC-----
Confidence 998741 01100 110000 000 000
Q ss_pred HHHHHHHHHHcCccccHHHHHHHHhh-CCCCccccCCCCCHHHHHHHHHHcCCEEEEeCCCCCCC---hHHHHHHHHHcC
Q 012942 215 RLHVARAMVEAGHVENLKQAFARYLY-DGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWALKN---PAAIIRKLKDVG 290 (453)
Q Consensus 215 r~hia~aLv~~G~~~~~~~aF~~yl~-~g~p~yv~~~~~~~eeaI~~I~~aGGvaVLAHP~~~~~---~~~li~~l~~~G 290 (453)
+|+. ...+. .....+++++..++.+|+++|||||.++.. ..+++..+++.|
T Consensus 107 ----------------------~~vl~e~~~~---~~~~~~~~~i~~i~~~g~~~vlaHp~r~~~~~~~~~~l~~l~~~G 161 (247)
T 2wje_A 107 ----------------------RYALIEFSMN---TPYRDIHSALSKILMLGITPVIAHIERYDALENNEKRVRELIDMG 161 (247)
T ss_dssp ----------------------SEEEEECCTT---CCHHHHHHHHHHHHTTTCEEEETTGGGCGGGTTCHHHHHHHHHTT
T ss_pred ----------------------eEEEEeCCCC---cchHHHHHHHHHHHHCCCcEEEEehhhHHHHhhCHHHHHHHHHCC
Confidence 0000 00000 001236789999999999999999987642 357888999999
Q ss_pred CcEEEEeCCCC--ChhhhhhhhhhhhHHHHHhHHHHHHHHHHHHcCCeeeeccCCCCCC
Q 012942 291 LHGLEVYRSDG--KLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLGGSDYHGRG 347 (453)
Q Consensus 291 ldGIEV~~~~~--~~~~~~~~~~~~n~~~l~~~~~~~~~~lA~~~gLl~tgGSDfHg~~ 347 (453)
+. +|+.++.. ....-+. . .....+..++.++|++.|+|||+|++.
T Consensus 162 ~~-lEiN~~s~~~~~~~g~~----~-------~~~~~~~~~~~~~gl~~~~GSDaH~~~ 208 (247)
T 2wje_A 162 CY-TQVNSSHVLKPKLFGER----Y-------KFMKKRAQYFLEQDLVHVIASDMHNLD 208 (247)
T ss_dssp CE-EEEEHHHHSCCCSSCCS----C-------HHHHHHHHHHHHTTCCSEEECCBCCSS
T ss_pred CE-EEEecHhhHhcCCCCCc----C-------hHHHHHHHHHHHCCCeEEEEeCCCCCc
Confidence 97 99987543 2100000 0 001256778889999999999999974
No 9
>2w9m_A Polymerase X; SAXS, DNA repair, DNA polymerase, DNA replication; 2.46A {Deinococcus radiodurans}
Probab=99.73 E-value=1.8e-17 Score=178.79 Aligned_cols=176 Identities=19% Similarity=0.164 Sum_probs=116.5
Q ss_pred CCceeEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCH------HHHH-------HHHHhcCCeEEeEEEE
Q 012942 70 DNNVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGI------PEAI-------ETARRFGMKIIPGVEI 136 (453)
Q Consensus 70 ~~~~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~IAITDHdt~~g~------~e~~-------~~a~~~gi~vI~GiEi 136 (453)
..+|++||||||.||||..+|++++++|++.|++.||||||++..+. ..+. ++.++ +|++++|+|+
T Consensus 324 ~~~~~~DlH~HT~~SDG~~t~eemv~~A~~~Gl~~IaiTDH~~~~~~~~~~~~~~~~~~~~~i~~l~~~-gi~il~GiEv 402 (578)
T 2w9m_A 324 VGDLRGMIHTHSTWSDGGASIREMAEATLTLGHEFLGTADHSRAAYYANGLTIERLREQLKEIRELQRA-GLPIVAGSEV 402 (578)
T ss_dssp GGGCCEEEEECCTTTTCSSCHHHHHHHHHHTTCSEEEECEEBTTCGGGTCBCHHHHHHHHHHHHHHHHT-TCCEECEEEE
T ss_pred hhhhceEEEecCCccCCCCCHHHHHHHHHHCCCeEEEEcCCCCccccccCCCHHHHHHHHHHHHHHHhc-CCeEEEeeee
Confidence 56899999999999999999999999999999999999999988543 2222 23333 9999999999
Q ss_pred EeeeCCCCCCCCCCcEEEEEEeccCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCCCCCCHH
Q 012942 137 STIFCQSRGSESEEPVHILAYYSSCGPSKYEELENFLANIRDGRFLRAKDMILKLNKLKLPLKWEHVAKIAGKGVAPGRL 216 (453)
Q Consensus 137 s~~~~~~~~~~~~~~vHILgYg~d~~~~~~~~L~~~L~~ir~~R~~R~~~iv~kL~~~Gi~i~~E~v~~~ag~~~~~gr~ 216 (453)
++...+ . ++. ... + |....+. ++..
T Consensus 403 ~i~~~G--------~-------ld~----~~~---~------------------l~~~D~v---------------I~sv 427 (578)
T 2w9m_A 403 DILDDG--------S-------LDF----PDD---V------------------LGELDYV---------------VVSV 427 (578)
T ss_dssp EBCTTS--------C-------BSS----CHH---H------------------HTTSSEE---------------EEEC
T ss_pred cccCCc--------c-------hhh----HHH---H------------------HhcCCEE---------------EEEe
Confidence 986421 1 110 011 0 0000000 0000
Q ss_pred HHHHHHHHcCccccHHHHHHHHhhCCCCccccCCCCCHHHHHHHHHHcCCEEEEeCCCCC---------CChHHHHHHHH
Q 012942 217 HVARAMVEAGHVENLKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGGLAVLAHPWAL---------KNPAAIIRKLK 287 (453)
Q Consensus 217 hia~aLv~~G~~~~~~~aF~~yl~~g~p~yv~~~~~~~eeaI~~I~~aGGvaVLAHP~~~---------~~~~~li~~l~ 287 (453)
|.. +..+..+ ..++++++++ .|+++|+|||... .+.+.++..++
T Consensus 428 H~~-------~~~~~~~-------------------~~~~~~~ai~-~g~v~IlaHP~~~~~~~~~~~~~~~~~il~~~~ 480 (578)
T 2w9m_A 428 HSN-------FTLDAAR-------------------QTERLIRAVS-HPLVTVLGHATGRLLLRRPGYALDLDAVLGACE 480 (578)
T ss_dssp CSC-------TTSCHHH-------------------HHHHHHHHHT-CSSCCEECSTTCCBTTTBCCCCCCHHHHHHHHH
T ss_pred ccC-------CCCCHHH-------------------HHHHHHHHHh-cCCCeEEECcchhhcCCCcCchhhHHHHHHHHH
Confidence 100 0000000 1245666665 5999999999742 12346788888
Q ss_pred HcCCcEEEEeCCCCChhhhhhhhhhhhHHHHHhHHHHHHHHHHHHcCCeeeeccCCCCCC
Q 012942 288 DVGLHGLEVYRSDGKLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLGGSDYHGRG 347 (453)
Q Consensus 288 ~~GldGIEV~~~~~~~~~~~~~~~~~n~~~l~~~~~~~~~~lA~~~gLl~tgGSDfHg~~ 347 (453)
+.| .+||+.++....... ..+.++|.+ |+.++.|||+|.+.
T Consensus 481 e~g-~~lEIN~~~~r~~~~-----------------~~~~~~a~e-Gl~i~igSDAH~~~ 521 (578)
T 2w9m_A 481 ANG-TVVEINANAARLDLD-----------------WREALRWRE-RLKFAINTDAHVPG 521 (578)
T ss_dssp HHT-CEEEEECSTTTCBSC-----------------HHHHHHHTT-TCCEEEECCCSSGG
T ss_pred HCC-CEEEEECCCCCcCcH-----------------HHHHHHHHc-CCEEEEECCCCChh
Confidence 888 499998765432211 167889999 99999999999874
No 10
>2hnh_A DNA polymerase III alpha subunit; DNA replication, nucleotidyltransferase, beta, PHP, transferase; HET: DNA; 2.30A {Escherichia coli} PDB: 2hqa_A*
Probab=99.73 E-value=2.2e-17 Score=185.85 Aligned_cols=94 Identities=24% Similarity=0.392 Sum_probs=79.7
Q ss_pred eeEceeeeCcCC--CCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcCCeEEeEEEEEeeeCCCCCCCCCC
Q 012942 73 VVFELHSHSNFS--DGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVEISTIFCQSRGSESEE 150 (453)
Q Consensus 73 ~~~DLH~HT~~S--DG~~tp~elv~~A~~~Gl~~IAITDHdt~~g~~e~~~~a~~~gi~vI~GiEis~~~~~~~~~~~~~ 150 (453)
.++||||||.|| ||..+|++++++|++.|+++||||||+++.|+.+++++|++.||++|+|+|+++.+.+. ...
T Consensus 5 ~~vdLH~HT~~S~lDG~~~~~elv~~A~~~Gl~alAITDH~~~~G~~~~~~~~~~~gIk~I~G~Ei~~~~~~~----~~~ 80 (910)
T 2hnh_A 5 RFVHLRVHSDYSMIDGLAKTAPLVKKAAALGMPALAITDFTNLCGLVKFYGAGHGAGIKPIVGADFNVQCDLL----GDE 80 (910)
T ss_dssp CCCCCCBCCGGGSSSCCSCHHHHHHHHHHTTCSEEEECCBTCCTTHHHHHHHHHHHTCEEEEEEEEEEECTTT----TTC
T ss_pred ceeeecccccCchhcccCCHHHHHHHHHHCCCCEEEEEeCCcchhHHHHHHHHHHCCCeEEEEEEEEEecCCC----Ccc
Confidence 379999999999 99999999999999999999999999999999999999999999999999999986421 012
Q ss_pred cEEEEEEeccCCCCchHHHHHH
Q 012942 151 PVHILAYYSSCGPSKYEELENF 172 (453)
Q Consensus 151 ~vHILgYg~d~~~~~~~~L~~~ 172 (453)
.+|+++|+.+ ..++.+|.++
T Consensus 81 ~~hlv~la~n--~~g~~nL~~l 100 (910)
T 2hnh_A 81 LTHLTVLAAN--NTGYQNLTLL 100 (910)
T ss_dssp CEEEEEEECS--HHHHHHHHHH
T ss_pred cceEEEEEcC--HHHHHHHHHH
Confidence 5899999975 2244444443
No 11
>2hpi_A DNA polymerase III alpha subunit; POL-beta-like nucleotidyltransferase fold, transferase; HET: DNA; 3.00A {Thermus aquaticus} PDB: 2hpm_A* 3e0d_A*
Probab=99.66 E-value=8.2e-16 Score=176.31 Aligned_cols=101 Identities=24% Similarity=0.268 Sum_probs=82.6
Q ss_pred ceeEceeeeCcCC--CCCCCHHHHHHHHHH--cCCcEEEEecCCCCCCHHHHHHHHHhcCCeEEeEEEEEeeeCCCCCCC
Q 012942 72 NVVFELHSHSNFS--DGYLSPSKLVERAHC--NGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVEISTIFCQSRGSE 147 (453)
Q Consensus 72 ~~~~DLH~HT~~S--DG~~tp~elv~~A~~--~Gl~~IAITDHdt~~g~~e~~~~a~~~gi~vI~GiEis~~~~~~~~~~ 147 (453)
+.++|||+||.|| ||..+|++++++|++ .|+++||||||+++.|+.+++++|++.||++|+|+|+++...+.-+..
T Consensus 5 ~~fvdLH~HT~~SlLDG~~~~~elv~~A~~~~~G~~alAITDH~~~~G~~~f~~~a~~~gIk~I~G~E~~~~~~~~~d~~ 84 (1220)
T 2hpi_A 5 LKFAHLHQHTQFSLLDGAAKLQDLLKWVKETTPEDPALAMTDHGNLFGAVEFYKKATAMGVKPIIGYEAYVAAESRFDRK 84 (1220)
T ss_dssp CCCCCCSBCCTTSTTTCCCCHHHHHHHHHHHCCSSCEEEEEEETCCTTHHHHHHHHHTTTCEEEEEEEEEEESSCTTCCC
T ss_pred CcEeEcccccCCCcccccCCHHHHHHHHHhccCCCCEEEEEecCcchhHHHHHHHHHHcCCeEEEEEEEEEecccccccc
Confidence 4589999999999 999999999999999 999999999999999999999999999999999999999764321111
Q ss_pred C----CC-cEEEEEEeccCCCCchHHHHHHHH
Q 012942 148 S----EE-PVHILAYYSSCGPSKYEELENFLA 174 (453)
Q Consensus 148 ~----~~-~vHILgYg~d~~~~~~~~L~~~L~ 174 (453)
. .. ..|++.|..+ ..+|.+|.++++
T Consensus 85 ~~~~~d~~~~hLvlLAkN--~~GY~NL~kLiS 114 (1220)
T 2hpi_A 85 RGKGLDGGYFHLTLLAKD--FTGYQNLVRLAS 114 (1220)
T ss_dssp CC-----CEEEEEEEECS--HHHHHHHHHHHH
T ss_pred ccccccCccceEEEEEcC--HHHHHHHHHHHH
Confidence 0 11 3799999874 345666665543
No 12
>3b0x_A DNA polymerase beta family (X family); structural genomics, riken structural genomics/proteomics in RSGI, polxc, PHP, DRP lyase; HET: DNA DGT; 1.36A {Thermus thermophilus} PDB: 3au2_A* 3au6_A* 3auo_A* 3b0y_A*
Probab=99.64 E-value=2.3e-15 Score=162.21 Aligned_cols=70 Identities=27% Similarity=0.293 Sum_probs=58.5
Q ss_pred CceeEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHH------H-------HHHHHHh-cCCeEEeEEEE
Q 012942 71 NNVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIP------E-------AIETARR-FGMKIIPGVEI 136 (453)
Q Consensus 71 ~~~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~IAITDHdt~~g~~------e-------~~~~a~~-~gi~vI~GiEi 136 (453)
..|++||||||.||||..++++++++|++.|++.|+||||+...++. + +.++.++ .+|++++|+|+
T Consensus 335 ~~~~~DlH~HT~~SDG~~t~ee~v~~A~~~G~~~iaiTDH~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~i~i~~G~Ei 414 (575)
T 3b0x_A 335 PQVKGDLQVHSTYSDGQNTLEELWEAAKTMGYRYLAVTDHSPAVRVAGGPSPEEALKRVGEIRRFNETHGPPYLLAGAEV 414 (575)
T ss_dssp GGCCEEEEECCTTTTCSCCHHHHHHHHHHTTCSEEEEEEECTTTTTSSCSCHHHHHHHHHHHHHHHHHHCSSEEEEEEEE
T ss_pred hhcCeeEeecCCccCCCCCHHHHHHHHHHCCCCEEEEcCCCCccccccCCCHHHHHHHHHHHHHHHHhcCCCeEEEEEee
Confidence 36899999999999999999999999999999999999999876531 1 2223333 48999999999
Q ss_pred Eeee
Q 012942 137 STIF 140 (453)
Q Consensus 137 s~~~ 140 (453)
++..
T Consensus 415 ~~~~ 418 (575)
T 3b0x_A 415 DIHP 418 (575)
T ss_dssp EBCT
T ss_pred cccC
Confidence 9863
No 13
>3f2b_A DNA-directed DNA polymerase III alpha chain; DNA polymerase C, DNA polymerase III; HET: DGT; 2.39A {Geobacillus kaustophilus} PDB: 3f2c_A* 3f2d_A*
Probab=99.52 E-value=2e-14 Score=162.77 Aligned_cols=136 Identities=24% Similarity=0.312 Sum_probs=99.6
Q ss_pred cccchhcccCCCCCCCCCCCcc--c------ccccccCCC--CceeEceeeeCcCC--CCCCCHHHHHHHHHHcCCcEEE
Q 012942 39 SVTEWVYLDQSHSSSSSEDDFG--V------HQILNRAVD--NNVVFELHSHSNFS--DGYLSPSKLVERAHCNGVKVLA 106 (453)
Q Consensus 39 ~~~~w~~~~~~~~~~~~~~~f~--~------~~~~~~~~~--~~~~~DLH~HT~~S--DG~~tp~elv~~A~~~Gl~~IA 106 (453)
..+.|+...|.......+.+.. + ..+.+.+.. +++++||||||.|| ||..+|++++++|+++|+++||
T Consensus 71 ~~g~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~r~d~~~~~~~~vdLH~HT~~S~lDG~~~~~eLv~~A~~~G~~aiA 150 (1041)
T 3f2b_A 71 KKGMWVKVRGSVQNDTFVRDLVIIANDLNEIAANERQDTAPEGEKRVELHLHTPMSQMDAVTSVTKLIEQAKKWGHPAIA 150 (1041)
T ss_dssp CTTCEEEEEEEEEEETTTTEEEEEEEEEEEECCCCCCCCSCTTSCCCBCCBCCTTSTTTCCSCHHHHHHHHHHTTCSCEE
T ss_pred CCCCEEEEEEEEEeccCCcceEEEeeeeEEeccccccCCcccCcceEEcccCCcCccccccCCHHHHHHHHHHCCCCEEE
Confidence 5568888866533322222221 1 111222223 57899999999999 9999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHhcCCeEEeEEEEEeeeCCCCC---------CCCCCcEEEEEEeccCCCCchHHHHHHHHHH
Q 012942 107 LTDHDTMSGIPEAIETARRFGMKIIPGVEISTIFCQSRG---------SESEEPVHILAYYSSCGPSKYEELENFLANI 176 (453)
Q Consensus 107 ITDHdt~~g~~e~~~~a~~~gi~vI~GiEis~~~~~~~~---------~~~~~~vHILgYg~d~~~~~~~~L~~~L~~i 176 (453)
|||||++.|+.+++++|++.||++|+|+|+++.+.+... .......|++.+..+ ..++.+|.++++..
T Consensus 151 ITDH~~~~G~~~~~~~a~~~gIk~I~G~E~~~~~~~~~~~~~~~~~~~~~~~~~~hlvlLAkN--~~Gy~nL~kLvS~a 227 (1041)
T 3f2b_A 151 VTDHAVVQSFPEAYSAAKKHGMKVIYGLEANIVDDGVPIAYNETHRRLGSGSGPFHVTLLAQN--ETGLKNLFKLVSLS 227 (1041)
T ss_dssp ECCBSCCTTHHHHHHHHHHHTCCEEEEEEEEEECC------------------CEEEEEEECS--HHHHHHHHHHHHHH
T ss_pred EecccchhhHHHHHHHHHHCCCEEEEEEEEEEEeCCcccccccccccccccCCCceEEEEeCC--HHHHHHHHHHHHHH
Confidence 999999999999999999999999999999997653210 011234799999864 45788888877654
No 14
>3dcp_A Histidinol-phosphatase; HISK, histidine biosynthesis, NESG, LMR141, structural genomics, PSI-2, protein structure initiative; 2.10A {Listeria monocytogenes str}
Probab=99.41 E-value=1.9e-12 Score=127.96 Aligned_cols=68 Identities=18% Similarity=0.311 Sum_probs=53.5
Q ss_pred eeEceeeeCcCCC-CC-CCHHHHHHHHHHcCCcEEEEecCCCCCC-H---------------------HH----HHHHHH
Q 012942 73 VVFELHSHSNFSD-GY-LSPSKLVERAHCNGVKVLALTDHDTMSG-I---------------------PE----AIETAR 124 (453)
Q Consensus 73 ~~~DLH~HT~~SD-G~-~tp~elv~~A~~~Gl~~IAITDHdt~~g-~---------------------~e----~~~~a~ 124 (453)
|++|+|+||.+|| |. .++++++++|.++|++.|+||||....+ + ++ +.++.+
T Consensus 1 m~~D~H~Ht~~s~~~~~~~~~e~~~~A~~~G~~~i~~TdH~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~Y~~~i~~l~~ 80 (283)
T 3dcp_A 1 MKRDGHTHTEFCPHGTHDDVEEMVLKAIELDFDEYSIVEHAPLSSEFMKNTAGDKEAVTTASMAMSDLPYYFKKMNHIKK 80 (283)
T ss_dssp CCEEEEECCTTCTTSCCCCHHHHHHHHHHTTCCEEEEEEECCCCHHHHHTBCSCTHHHHTTSCCGGGHHHHHHHHHHHHH
T ss_pred CCeEEeeCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEecCCCCcchhhhcccccccccccccchHHHHHHHHHHHHHHHH
Confidence 5789999999997 55 6999999999999999999999987642 1 11 222223
Q ss_pred hc--CCeEEeEEEEEeee
Q 012942 125 RF--GMKIIPGVEISTIF 140 (453)
Q Consensus 125 ~~--gi~vI~GiEis~~~ 140 (453)
++ +|.|+.|+|+....
T Consensus 81 ~y~~~I~Il~GiE~d~~~ 98 (283)
T 3dcp_A 81 KYASDLLIHIGFEVDYLI 98 (283)
T ss_dssp HTTTTCEEEEEEEEECCT
T ss_pred HccCCCeEEEEEEecccC
Confidence 33 79999999998753
No 15
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=98.62 E-value=2.1e-07 Score=87.92 Aligned_cols=55 Identities=9% Similarity=-0.084 Sum_probs=41.4
Q ss_pred ceeEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCC-CCCHHHHHHHHHhcCCeEEeEEEEEee
Q 012942 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDT-MSGIPEAIETARRFGMKIIPGVEISTI 139 (453)
Q Consensus 72 ~~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~IAITDHdt-~~g~~e~~~~a~~~gi~vI~GiEis~~ 139 (453)
|+++|+|+| +.++++.|++. ++.||||||.. +.+...+.+.. .++.+ .|+|+...
T Consensus 7 M~~~D~hvh---------~~e~~~~A~~~-~~~i~itdH~~~~~~~~~~~~l~--~~~~I-~GvEi~~~ 62 (212)
T 1v77_A 7 VKFIEMDIR---------DKEAYELAKEW-FDEVVVSIKFNEEVDKEKLREAR--KEYGK-VAILLSNP 62 (212)
T ss_dssp CCCEEEEEC---------SHHHHHHHHHH-CSEEEEEEEESSCCCHHHHHHHH--HHHSC-EEEEEESC
T ss_pred eEEEEeCcC---------HHHHHHHHHHH-hcEEEEeeccCcccchhhHHHHH--hcCCe-eEEEEecC
Confidence 338999999 99999999999 99999999944 33333333332 34555 99999863
No 16
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=93.27 E-value=0.13 Score=48.76 Aligned_cols=62 Identities=15% Similarity=0.187 Sum_probs=46.3
Q ss_pred CceeEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcCCeEEeE
Q 012942 71 NNVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPG 133 (453)
Q Consensus 71 ~~~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~IAITDHdt~~g~~e~~~~a~~~gi~vI~G 133 (453)
.++.+|.|||-.......+++++++++.+.|++.+.++-.+ ......+.+.+++.+..++++
T Consensus 3 ~m~~iD~H~Hl~~~~~~~~~~~~l~~~~~~Gv~~~v~~~~~-~~~~~~~~~l~~~~~~~i~~~ 64 (272)
T 2y1h_A 3 GVGLVDCHCHLSAPDFDRDLDDVLEKAKKANVVALVAVAEH-SGEFEKIMQLSERYNGFVLPC 64 (272)
T ss_dssp CCCEEEEEECTTSGGGTTTHHHHHHHHHHTTEEEEEECCSS-GGGHHHHHHHHHHTTTTEEEE
T ss_pred CCcEEEEeeCCCchhhhcCHHHHHHHHHHCCCCEEEEeCCC-HHHHHHHHHHHHHCCCCEEEE
Confidence 36689999998876444689999999999999987776432 345667777787776555554
No 17
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=90.84 E-value=0.41 Score=44.77 Aligned_cols=55 Identities=15% Similarity=0.207 Sum_probs=40.5
Q ss_pred ceeEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcC
Q 012942 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFG 127 (453)
Q Consensus 72 ~~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~IAITDHdt~~g~~e~~~~a~~~g 127 (453)
|+.+|.|||-....-..+++++++.+.+.|++.+.++-.+ ......+.+.+++.+
T Consensus 3 m~~iD~H~Hl~~~~~~~~~~~~l~~~~~~Gv~~~v~~~~~-~~~~~~~~~l~~~~~ 57 (259)
T 1zzm_A 3 CRFIDTHCHFDFPPFSGDEEASLQRAAQAGVGKIIVPATE-AENFARVLALAENYQ 57 (259)
T ss_dssp CCEEESCBCTTSTTTTTCHHHHHHHHHHTTEEEEEEECCS-GGGHHHHHHHHHHCT
T ss_pred ceEEEeeecCCchhhccCHHHHHHHHHHcCCCEEEEecCC-HHHHHHHHHHHHhCC
Confidence 5689999998876545579999999999999987665222 344566666666654
No 18
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=88.30 E-value=0.35 Score=47.29 Aligned_cols=54 Identities=20% Similarity=0.210 Sum_probs=40.5
Q ss_pred ceeEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhc
Q 012942 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRF 126 (453)
Q Consensus 72 ~~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~IAITDHdt~~g~~e~~~~a~~~ 126 (453)
|+.+|.|||-...+-....++++++|.++|++.+.++- .+......+.++++++
T Consensus 1 M~~iD~H~HL~~~~~~~d~~~vl~~a~~~gV~~~v~~g-~~~~~~~~~~~la~~~ 54 (287)
T 3rcm_A 1 MQLIDIGVNLTNSSFHDQQAAIVERALEAGVTQMLLTG-TSLAVSEQALELCQQL 54 (287)
T ss_dssp CCEEEEEECTTCGGGTTCHHHHHHHHHHTTEEEEEECC-CSHHHHHHHHHHHHHH
T ss_pred CceEEEeecCCchhcccCHHHHHHHHHHcCCeEEEEec-CCHHHHHHHHHHHHhC
Confidence 46899999998775556899999999999999988762 1233455566666654
No 19
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=88.07 E-value=0.58 Score=43.88 Aligned_cols=55 Identities=20% Similarity=0.212 Sum_probs=37.5
Q ss_pred ceeEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcC
Q 012942 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFG 127 (453)
Q Consensus 72 ~~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~IAITDHdt~~g~~e~~~~a~~~g 127 (453)
|+.+|.|||-...+-..+++++++.+.+.|++.+.++--+ ......+.+.+++.+
T Consensus 3 m~~iD~H~Hl~~~~~~~~~~~~l~~~~~~Gv~~~v~~~~~-~~~~~~~~~l~~~~~ 57 (264)
T 1xwy_A 3 YRMFDIGVNLTSSQFAKDRDDVVACAFDAGVNGLLITGTN-LRESQQAQKLARQYS 57 (264)
T ss_dssp --CEEEEECTTSGGGTTTHHHHHHHHHHTTCCEEEECCCS-HHHHHHHHHHHHHST
T ss_pred CcEEEEeeCCCChhhccCHHHHHHHHHHCCCCEEEEeCCC-HHHHHHHHHHHHhCC
Confidence 4589999998765434579999999999999997754221 223445556666654
No 20
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=87.15 E-value=0.29 Score=47.12 Aligned_cols=50 Identities=16% Similarity=0.222 Sum_probs=38.3
Q ss_pred ceeEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhc
Q 012942 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRF 126 (453)
Q Consensus 72 ~~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~IAITDHdt~~g~~e~~~~a~~~ 126 (453)
|+.+|.|||-.+.+ ..++++++|++.|+..+.++ .+......+.++++++
T Consensus 1 m~liDtH~HL~~~~---d~~~vl~~a~~~gV~~i~v~--~~~~~~~~~~~la~~~ 50 (254)
T 3gg7_A 1 MSLIDFHVHLDLYP---DPVAVARACEERQLTVLSVT--TTPAAWRGTLALAAGR 50 (254)
T ss_dssp -CCEEEEECGGGSS---SHHHHHHHHHHTTCEEEECC--SSGGGHHHHHGGGTTC
T ss_pred CceEEEeeCCCCCC---CHHHHHHHHHHCCCcEEEec--CCHHHHHHHHHHHHhC
Confidence 45799999998653 78999999999999988764 3455666677666654
No 21
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12
Probab=86.53 E-value=0.55 Score=43.85 Aligned_cols=55 Identities=11% Similarity=0.051 Sum_probs=37.5
Q ss_pred ceeEceeeeCcCCCC---CCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcC
Q 012942 72 NVVFELHSHSNFSDG---YLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFG 127 (453)
Q Consensus 72 ~~~~DLH~HT~~SDG---~~tp~elv~~A~~~Gl~~IAITDHdt~~g~~e~~~~a~~~g 127 (453)
||.+|.|||....+- ..+++++++.+.+.|++.+.+.-.+ ......+.+.+++.+
T Consensus 1 m~~iD~H~Hl~~~~~~~~~~~~~~~l~~~~~~Gv~~~v~~~~~-~~~~~~~~~~~~~~p 58 (265)
T 1yix_A 1 MFLVDSHCHLDGLDYESLHKDVDDVLAKAAARDVKFCLAVATT-LPSYLHMRDLVGERD 58 (265)
T ss_dssp CCEEEEEECGGGSCTTTTCSSHHHHHHHHHHTTEEEEEECCSS-HHHHHHHHHHHCSCT
T ss_pred CcEEEEeeCCCchhhcccccCHHHHHHHHHHCCCCEEEEeCCC-HHHHHHHHHHHHHCC
Confidence 468999999875432 5689999999999999997764322 122334455555443
No 22
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=85.41 E-value=0.6 Score=45.27 Aligned_cols=55 Identities=18% Similarity=0.190 Sum_probs=38.5
Q ss_pred ceeEceeeeCcCC--CCC--------CCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcC
Q 012942 72 NVVFELHSHSNFS--DGY--------LSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFG 127 (453)
Q Consensus 72 ~~~~DLH~HT~~S--DG~--------~tp~elv~~A~~~Gl~~IAITDHdt~~g~~e~~~~a~~~g 127 (453)
++.+|.|||-... ++. .++++++++|++.|++.+.++-. +......+.+.+++.+
T Consensus 1 ~~~iD~H~Hl~~~~~~~~~~~~~~h~~d~~~vl~~~~~~GV~~~v~~~~-~~~~~~~~~~la~~~~ 65 (301)
T 2xio_A 1 MKFIDIGINLTDPMFRGIYRGVQKHQDDLQDVIGRAVEIGVKKFMITGG-NLQDSKDALHLAQTNG 65 (301)
T ss_dssp CCEEEEEECTTCGGGGTEETTEECSCCCHHHHHHHHHHHTEEEEEECCC-SHHHHHHHHHHHTTCT
T ss_pred CeEEEEcCCCCChHhcccccccccCccCHHHHHHHHHHCCCCEEEEeCC-CHHHHHHHHHHHHHCC
Confidence 4689999998765 332 58999999999999999888732 1223344555555543
No 23
>2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=85.17 E-value=1.2 Score=41.47 Aligned_cols=54 Identities=20% Similarity=0.255 Sum_probs=38.2
Q ss_pred eeEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcC
Q 012942 73 VVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFG 127 (453)
Q Consensus 73 ~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~IAITDHdt~~g~~e~~~~a~~~g 127 (453)
|.+|.|||....+...+++++++.+.+.|++.+.+.-.+ ......+.+.+++.+
T Consensus 1 m~iD~H~Hl~~~~~~~~~~~~l~~~~~~Gv~~~v~~~~~-~~~~~~~~~~~~~~p 54 (265)
T 2gzx_A 1 MLIDTHVHLNDEQYDDDLSEVITRAREAGVDRMFVVGFN-KSTIERAMKLIDEYD 54 (265)
T ss_dssp -CEEEEECTTSGGGTTTHHHHHHHHHHTTCCEEEEEECS-HHHHHHHHHHHHHCT
T ss_pred CeEEEeeCCCCcccccCHHHHHHHHHHcCCCEEEEeCCC-HHHHHHHHHHHHhCC
Confidence 478999998766444579999999999999987776544 222344555666554
No 24
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=78.53 E-value=1.5 Score=43.70 Aligned_cols=56 Identities=16% Similarity=0.288 Sum_probs=42.0
Q ss_pred CCceeEceeeeCcCCC--C--------CCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhc
Q 012942 70 DNNVVFELHSHSNFSD--G--------YLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRF 126 (453)
Q Consensus 70 ~~~~~~DLH~HT~~SD--G--------~~tp~elv~~A~~~Gl~~IAITDHdt~~g~~e~~~~a~~~ 126 (453)
..++++|.|||-+... | .-..++++++|++.|+..+.++- .+......+.++++++
T Consensus 24 ~~m~~iDtH~HL~~~~f~g~y~gk~~h~~d~~~vl~rA~~aGV~~ii~~g-~~~~~~~~~~~La~~~ 89 (325)
T 3ipw_A 24 MAQQFIDIGANLTDDNYFGNYHGKHYHEEDIDVVLQRAERNGLSHIIITS-GCLNDFKKAIEIINKY 89 (325)
T ss_dssp CCCCEEEEEECTTSGGGGTEETTEECSCCCHHHHHHHHHHTTEEEEEECC-CSHHHHHHHHHHHHHH
T ss_pred cCCCeEEEEECCCchHhccccccccccccCHHHHHHHHHHcCCcEEEEcc-CCHHHHHHHHHHHHHC
Confidence 4477899999988752 2 56899999999999999887763 2344556667777764
No 25
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=73.83 E-value=1.6 Score=41.28 Aligned_cols=56 Identities=7% Similarity=0.155 Sum_probs=40.7
Q ss_pred CceeEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcC
Q 012942 71 NNVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFG 127 (453)
Q Consensus 71 ~~~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~IAITDHdt~~g~~e~~~~a~~~g 127 (453)
+.-++|.|||-.+.+-..+++++++.+.+.|++.+.++-. +......+.+.+++.+
T Consensus 10 ~~~~~~~~~hl~~~~~~~~~~~~l~~~~~~GV~~~v~~~~-~~~~~~~~~~l~~~~p 65 (268)
T 1j6o_A 10 HHHMVDTHAHLHFHQFDDDRNAVISSFEENNIEFVVNVGV-NLEDSKKSLDLSKTSD 65 (268)
T ss_dssp CCCEEEEEECTTSGGGTTTHHHHHHTTTTTTEEEEEEECS-SHHHHHHHHHHHTTCT
T ss_pred cccccccccCCCChhhccCHHHHHHHHHHcCCCEEEEeCC-CHHHHHHHHHHHHHCC
Confidence 3467899999998877789999999999999987766432 2223344555666554
No 26
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=71.10 E-value=5.8 Score=40.37 Aligned_cols=24 Identities=17% Similarity=-0.092 Sum_probs=19.4
Q ss_pred CHHHHHHHHHHcCCEEE--EeCCCCC
Q 012942 253 LAEVAVQLIHRTGGLAV--LAHPWAL 276 (453)
Q Consensus 253 ~~eeaI~~I~~aGGvaV--LAHP~~~ 276 (453)
....+++.||+.|+.++ |.|+++.
T Consensus 97 ~~k~l~davH~~G~~i~~QL~H~Gr~ 122 (400)
T 4gbu_A 97 EWTKIFNAIHEKKSFVWVQLAVLGWA 122 (400)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCGGG
T ss_pred HHHHHHHHHHhcCCceEEeeeecCcc
Confidence 35678899999999988 7898753
No 27
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*
Probab=69.70 E-value=4.1 Score=38.92 Aligned_cols=64 Identities=17% Similarity=0.114 Sum_probs=42.6
Q ss_pred ceeEceeeeCcCC--CC-----C----CCH-HHH---HHHHHHcCCcEEEEecCCCC-CCHHHHHHHHHhcCCeEEeEEE
Q 012942 72 NVVFELHSHSNFS--DG-----Y----LSP-SKL---VERAHCNGVKVLALTDHDTM-SGIPEAIETARRFGMKIIPGVE 135 (453)
Q Consensus 72 ~~~~DLH~HT~~S--DG-----~----~tp-~el---v~~A~~~Gl~~IAITDHdt~-~g~~e~~~~a~~~gi~vI~GiE 135 (453)
+-.+|.|||...+ +. . .+. +++ +++|.+.|++.+...-++.. .....+.+.+++.|+.+++++-
T Consensus 16 ~G~iD~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gv~~iv~~~~~~~~~~~~~~~~~~~~~~~~v~~~~G 95 (314)
T 2vc7_A 16 IGFTLIHEHLRVFSEAVRQQWPHLYNEDEEFRNAVNEVKRAMQFGVKTIVDPTVMGLGRDIRFMEKVVKATGINLVAGTG 95 (314)
T ss_dssp CCSEESSCBSCBCCHHHHHHCGGGCCHHHHHHHHHHHHHHHHHTTCCEEEECCCBTTTCCHHHHHHHHHHHCCEEEECEE
T ss_pred cCCcccccccccCcchhcccCcchhhhcccHHHHHHHHHHHHHcCCCEEEecCCCCCCcCHHHHHHHHHHcCCeEEEEee
Confidence 3578999999764 21 1 012 223 48899999999877666633 3466677788888877776643
No 28
>3e2v_A 3'-5'-exonuclease; structural genomics, hydrolase, PSI-2, protein initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.50A {Saccharomyces cerevisiae}
Probab=67.97 E-value=4.9 Score=41.26 Aligned_cols=56 Identities=21% Similarity=0.173 Sum_probs=43.1
Q ss_pred CCceeEceeeeCcCC--CC--------CCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhc
Q 012942 70 DNNVVFELHSHSNFS--DG--------YLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRF 126 (453)
Q Consensus 70 ~~~~~~DLH~HT~~S--DG--------~~tp~elv~~A~~~Gl~~IAITDHdt~~g~~e~~~~a~~~ 126 (453)
..++++|.|||-+.+ +| ....++++++|++.|++.+.+|- .++.....+.++|+++
T Consensus 10 ~~~~~iDih~nL~d~~f~g~y~~~~~h~~D~~~vl~rA~~~GV~~ii~~g-~~l~~s~~~~~La~~~ 75 (401)
T 3e2v_A 10 SPLKYYDIGLNLTDPMFHGIYNGKQYHPADYVKLLERAAQRHVKNALVTG-SSIAESQSAIELVSSV 75 (401)
T ss_dssp -CCCEEEEEECTTSGGGGTEETTEECSCCCHHHHHHHHHHTTEEEEEECC-CSHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEeCcCcHHHhhhccccccCccCHHHHHHHHHHCCCCEEEEec-CCHHHHHHHHHHHHHC
Confidence 346789999999876 44 25789999999999999998874 3345566777888765
No 29
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=66.76 E-value=14 Score=34.03 Aligned_cols=21 Identities=24% Similarity=0.487 Sum_probs=17.5
Q ss_pred ChHHHHHHHHHcCCcEEEEeC
Q 012942 278 NPAAIIRKLKDVGLHGLEVYR 298 (453)
Q Consensus 278 ~~~~li~~l~~~GldGIEV~~ 298 (453)
...+.++.+++.|++|||++.
T Consensus 23 ~~~~~l~~~~~~G~~~vEl~~ 43 (262)
T 3p6l_A 23 PLTEALDKTQELGLKYIEIYP 43 (262)
T ss_dssp CHHHHHHHHHHTTCCEEEECT
T ss_pred CHHHHHHHHHHcCCCEEeecC
Confidence 456788888999999999985
No 30
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=66.74 E-value=12 Score=34.50 Aligned_cols=20 Identities=15% Similarity=0.273 Sum_probs=12.7
Q ss_pred hHHHHHHHHHcCCcEEEEeC
Q 012942 279 PAAIIRKLKDVGLHGLEVYR 298 (453)
Q Consensus 279 ~~~li~~l~~~GldGIEV~~ 298 (453)
..+.++.+++.|++|||++.
T Consensus 32 ~~~~l~~~~~~G~~~vEl~~ 51 (257)
T 3lmz_A 32 LDTTLKTLERLDIHYLCIKD 51 (257)
T ss_dssp HHHHHHHHHHTTCCEEEECT
T ss_pred HHHHHHHHHHhCCCEEEEec
Confidence 44566666666777777664
No 31
>3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824}
Probab=61.92 E-value=13 Score=34.53 Aligned_cols=36 Identities=17% Similarity=0.222 Sum_probs=29.3
Q ss_pred ceeEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCC
Q 012942 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDT 112 (453)
Q Consensus 72 ~~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~IAITDHdt 112 (453)
+|.+|.|+|... .++++++.+.+.|++.+.+.-.+.
T Consensus 2 ~m~iD~H~Hl~~-----~~~~~l~~m~~~Gv~~~v~~~~~~ 37 (272)
T 3cjp_A 2 SLIIDGHTHVIL-----PVEKHIKIMDEAGVDKTILFSTSI 37 (272)
T ss_dssp -CCEEEEEECCS-----SHHHHHHHHHHHTCCEEEEECCSC
T ss_pred ceEEEehhhcCC-----CHHHHHHHHHHcCCCEEEEeCCCC
Confidence 358999999865 358999999999999988876643
No 32
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=61.53 E-value=13 Score=34.50 Aligned_cols=43 Identities=14% Similarity=0.079 Sum_probs=32.5
Q ss_pred ChHHHHHHHHHcCCcEEEEeCCCCChhhhhhhhhhhhHHHHHhHHHHHHHHHHHHcCCeeee
Q 012942 278 NPAAIIRKLKDVGLHGLEVYRSDGKLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLG 339 (453)
Q Consensus 278 ~~~~li~~l~~~GldGIEV~~~~~~~~~~~~~~~~~n~~~l~~~~~~~~~~lA~~~gLl~tg 339 (453)
...+.++.+++.|++|||+..+... +.+ .+.++++++||-+++
T Consensus 24 ~~~~~l~~~~~~G~~~vEl~~~~~~--~~~-----------------~~~~~l~~~gl~~~~ 66 (269)
T 3ngf_A 24 PFLERFRLAAEAGFGGVEFLFPYDF--DAD-----------------VIARELKQHNLTQVL 66 (269)
T ss_dssp CHHHHHHHHHHTTCSEEECSCCTTS--CHH-----------------HHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHcCCCEEEecCCccC--CHH-----------------HHHHHHHHcCCcEEE
Confidence 4567888899999999999876421 111 577889999998775
No 33
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=61.02 E-value=9.1 Score=38.30 Aligned_cols=23 Identities=30% Similarity=0.242 Sum_probs=18.6
Q ss_pred CHHHHHHHHHHcCCEEE--EeCCCC
Q 012942 253 LAEVAVQLIHRTGGLAV--LAHPWA 275 (453)
Q Consensus 253 ~~eeaI~~I~~aGGvaV--LAHP~~ 275 (453)
....+++.||+.|+.++ |.|+++
T Consensus 80 ~~k~l~~avh~~G~~i~~QL~H~Gr 104 (358)
T 4a3u_A 80 AWLPITQAVHDAGGLIFAQLWHMGR 104 (358)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCGG
T ss_pred HHHHHHHHHHhcCCceeeccccccc
Confidence 35678899999999877 788875
No 34
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=55.70 E-value=16 Score=34.14 Aligned_cols=44 Identities=18% Similarity=0.117 Sum_probs=32.5
Q ss_pred hHHHHHHHHHcCCcEEEEeCCC---CChhhhhhhhhhhhHHHHHhHHHHHHHHHHHHcCCeeee
Q 012942 279 PAAIIRKLKDVGLHGLEVYRSD---GKLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLG 339 (453)
Q Consensus 279 ~~~li~~l~~~GldGIEV~~~~---~~~~~~~~~~~~~n~~~l~~~~~~~~~~lA~~~gLl~tg 339 (453)
..+.++.+.+.|++|||+.... .+..+. ..+.++++++||-+++
T Consensus 19 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~-----------------~~~~~~l~~~gl~i~~ 65 (294)
T 3vni_A 19 YKYYIEKVAKLGFDILEIAASPLPFYSDIQI-----------------NELKACAHGNGITLTV 65 (294)
T ss_dssp HHHHHHHHHHHTCSEEEEESTTGGGCCHHHH-----------------HHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHcCCCEEEecCcccCCcCHHHH-----------------HHHHHHHHHcCCeEEE
Confidence 4677888889999999998542 122222 2678899999998887
No 35
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=55.27 E-value=29 Score=32.12 Aligned_cols=46 Identities=15% Similarity=0.193 Sum_probs=33.3
Q ss_pred ChHHHHHHHHHcCCcEEEEeCCCCCh---hhhhhhhhhhhHHHHHhHHHHHHHHHHHHcCCeeeec
Q 012942 278 NPAAIIRKLKDVGLHGLEVYRSDGKL---VDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLGG 340 (453)
Q Consensus 278 ~~~~li~~l~~~GldGIEV~~~~~~~---~~~~~~~~~~n~~~l~~~~~~~~~~lA~~~gLl~tgG 340 (453)
...+.++.+++.|++|||+....... .+. ..+.++++++||-+++.
T Consensus 18 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~-----------------~~~~~~l~~~gl~~~~~ 66 (290)
T 2qul_A 18 DFPATAKRIAGLGFDLMEISLGEFHNLSDAKK-----------------RELKAVADDLGLTVMCC 66 (290)
T ss_dssp CHHHHHHHHHHTTCSEEEEESTTGGGSCHHHH-----------------HHHHHHHHHHTCEEEEE
T ss_pred cHHHHHHHHHHhCCCEEEEecCCccccchhhH-----------------HHHHHHHHHcCCceEEe
Confidence 34677888889999999998654211 111 26778899999988874
No 36
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=53.70 E-value=21 Score=35.80 Aligned_cols=23 Identities=22% Similarity=0.196 Sum_probs=17.9
Q ss_pred CHHHHHHHHHHcCCEEE--EeCCCC
Q 012942 253 LAEVAVQLIHRTGGLAV--LAHPWA 275 (453)
Q Consensus 253 ~~eeaI~~I~~aGGvaV--LAHP~~ 275 (453)
....+++.||+.|+.++ |.|+++
T Consensus 88 ~~k~l~~avH~~G~~i~~QL~H~Gr 112 (361)
T 3gka_A 88 GWRLVTDAVHAAGGRIFLQLWHVGR 112 (361)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCTT
T ss_pred HHHHHHHHHHhcCCeEEEeeccCCc
Confidence 35678889999999876 688765
No 37
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=53.54 E-value=29 Score=31.72 Aligned_cols=42 Identities=17% Similarity=0.047 Sum_probs=23.0
Q ss_pred CCHHHHHHHHHHcCC--EEEEe-CCC----CCCChHHHHHHHHHcCCcE
Q 012942 252 PLAEVAVQLIHRTGG--LAVLA-HPW----ALKNPAAIIRKLKDVGLHG 293 (453)
Q Consensus 252 ~~~eeaI~~I~~aGG--vaVLA-HP~----~~~~~~~li~~l~~~GldG 293 (453)
.+++++++.++++|- |=+.. .|. ......++-+.+.+.||.-
T Consensus 19 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~~ 67 (272)
T 2q02_A 19 LSIEAFFRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEI 67 (272)
T ss_dssp SCHHHHHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEE
T ss_pred CCHHHHHHHHHHcCCCEEEeeccccccccccccCHHHHHHHHHHcCCeE
Confidence 568888888888874 33332 221 1112334455556677653
No 38
>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ...
Probab=53.40 E-value=14 Score=36.05 Aligned_cols=61 Identities=16% Similarity=0.104 Sum_probs=39.2
Q ss_pred ceeEceeeeCcCCCCC------------CCHHH-H---HHHHHHcCCcEEEEecCC-CCCCHHHHHHHHHhcCCeEEe
Q 012942 72 NVVFELHSHSNFSDGY------------LSPSK-L---VERAHCNGVKVLALTDHD-TMSGIPEAIETARRFGMKIIP 132 (453)
Q Consensus 72 ~~~~DLH~HT~~SDG~------------~tp~e-l---v~~A~~~Gl~~IAITDHd-t~~g~~e~~~~a~~~gi~vI~ 132 (453)
+-.+|.|||-.+.-+. ..+++ + +++|++.|+..|...=-+ .......+.+.+++.++.++.
T Consensus 15 lGliD~H~HL~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~~~aGV~~iv~~~~~~~~~~~~~~~~la~~~~~~i~~ 92 (330)
T 2ob3_A 15 AGFTLTHEHICGSSAGFLRAWPEFFGSRKALAEKAVRGLRRARAAGVRTIVDVSTFDIGRDVSLLAEVSRAADVHIVA 92 (330)
T ss_dssp HCSEEEEECSEECCTTHHHHCGGGGSCHHHHHHHHHHHHHHHHHTTCCEEEECCCGGGTCCHHHHHHHHHHHTCEEEC
T ss_pred CCCceeeeCeecCCchhccCCCchhhhccCHHHHHHHHHHHHHHcCCCEEEeCCCCCcCCCHHHHHHHHHHhCCcEEE
Confidence 3578999998773111 23334 3 788999999886443322 235577777788877765543
No 39
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=52.35 E-value=13 Score=35.54 Aligned_cols=57 Identities=5% Similarity=0.054 Sum_probs=37.5
Q ss_pred CCceeEceeeeCcCCC------------CCCCHHHHHHHHHHcCCcEEEEecCCCC-CCHHHHHHHHHhc
Q 012942 70 DNNVVFELHSHSNFSD------------GYLSPSKLVERAHCNGVKVLALTDHDTM-SGIPEAIETARRF 126 (453)
Q Consensus 70 ~~~~~~DLH~HT~~SD------------G~~tp~elv~~A~~~Gl~~IAITDHdt~-~g~~e~~~~a~~~ 126 (453)
.+++.+|.|+|-...+ ...+++++++.+.+.|++.+.+.-=+.. .....+.+++++.
T Consensus 23 ~p~~~iDtH~Hl~~~~~p~~~~~~~~p~~~~~~e~~l~~~~~~GV~~~V~v~~~~~~~~n~~~~~~~~~~ 92 (294)
T 4i6k_A 23 MKMNCIDTHAHVFSTQDHSIETARYAPDYEATVQSFISHLDEHNFTHGVLVQPSFLGTNNQAMLNAIQQY 92 (294)
T ss_dssp --CCSEEEEECCBCTTSCCCTTCSCCCCSCBCHHHHHHHHHHTTCCEEEEECCGGGTTCCHHHHHHHHHS
T ss_pred CCCCceEeeeEeecCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCeEEEecCcccccchHHHHHHHHHC
Confidence 4567899999987431 1468999999999999999887732111 1123355555554
No 40
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=52.34 E-value=26 Score=32.66 Aligned_cols=21 Identities=14% Similarity=0.208 Sum_probs=14.0
Q ss_pred hHHHHHHHHHcCCcEEEEeCC
Q 012942 279 PAAIIRKLKDVGLHGLEVYRS 299 (453)
Q Consensus 279 ~~~li~~l~~~GldGIEV~~~ 299 (453)
..+.++.+++.|++|||++..
T Consensus 40 ~~~~l~~~~~~G~~~vEl~~~ 60 (287)
T 3kws_A 40 LNEKLDFMEKLGVVGFEPGGG 60 (287)
T ss_dssp HHHHHHHHHHTTCCEEECBST
T ss_pred HHHHHHHHHHcCCCEEEecCC
Confidence 455666667777777777655
No 41
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=52.31 E-value=23 Score=35.56 Aligned_cols=23 Identities=22% Similarity=0.154 Sum_probs=18.0
Q ss_pred CHHHHHHHHHHcCCEEE--EeCCCC
Q 012942 253 LAEVAVQLIHRTGGLAV--LAHPWA 275 (453)
Q Consensus 253 ~~eeaI~~I~~aGGvaV--LAHP~~ 275 (453)
....+++.||+.|+.++ |.|+++
T Consensus 80 ~~k~l~~avH~~G~~i~~QL~H~Gr 104 (362)
T 4ab4_A 80 GWNNVTKAVHAAGGRIFLQLWHVGR 104 (362)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCTT
T ss_pred HHHHHHHHHHhcCCEEEEEeccCcc
Confidence 35678889999999876 788765
No 42
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=50.95 E-value=7.1 Score=39.61 Aligned_cols=29 Identities=28% Similarity=0.281 Sum_probs=26.2
Q ss_pred ceeEceeeeCcCCCCCCCHHHHHHHHHHcCCc
Q 012942 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVK 103 (453)
Q Consensus 72 ~~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~ 103 (453)
..+++||+|- ||.++|+.+++.|+++|++
T Consensus 29 LPKvELH~HL---dGsl~p~tl~~LA~~~g~~ 57 (380)
T 4gxw_A 29 LPKVELHCHL---LGAVRHDTFVALAQRSGAP 57 (380)
T ss_dssp SCEEECCBBG---GGCCCHHHHHHHHHHHTCS
T ss_pred ChhHHhhcCC---cCCCCHHHHHHHHHHhCCC
Confidence 5679999996 7999999999999999976
No 43
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=50.21 E-value=24 Score=34.79 Aligned_cols=23 Identities=17% Similarity=0.053 Sum_probs=17.8
Q ss_pred CHHHHHHHHHHcCCEEE--EeCCCC
Q 012942 253 LAEVAVQLIHRTGGLAV--LAHPWA 275 (453)
Q Consensus 253 ~~eeaI~~I~~aGGvaV--LAHP~~ 275 (453)
....+++.||+.|+.++ |.|.++
T Consensus 84 ~~~~~~~~vh~~g~~i~~QL~h~Gr 108 (338)
T 1z41_A 84 GFAKLTEQVKEQGSKIGIQLAHAGR 108 (338)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHHHhcCCEEEEEecCCCc
Confidence 35678889999999755 889754
No 44
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=49.66 E-value=16 Score=34.21 Aligned_cols=45 Identities=24% Similarity=0.248 Sum_probs=31.5
Q ss_pred HHHHHHHHHcCCcEEEEeCCCCChhhhhhhhhhhhHHHHHhHHHHHHHHHHHHcCCee-eecc
Q 012942 280 AAIIRKLKDVGLHGLEVYRSDGKLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLK-LGGS 341 (453)
Q Consensus 280 ~~li~~l~~~GldGIEV~~~~~~~~~~~~~~~~~n~~~l~~~~~~~~~~lA~~~gLl~-tgGS 341 (453)
.+.++.+.+.|++|||+........+.+ .+.++++++||-+ +.+.
T Consensus 44 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~-----------------~~~~~l~~~gl~~~~~~~ 89 (290)
T 2zvr_A 44 RKGMELAKRVGYQAVEIAVRDPSIVDWN-----------------EVKILSEELNLPICAIGT 89 (290)
T ss_dssp HHHHHHHHHHTCSEEEEECSCGGGSCHH-----------------HHHHHHHHHTCCEEEEEC
T ss_pred HHHHHHHHHhCCCEEEEcCCCcchhhHH-----------------HHHHHHHHcCCeEEEEec
Confidence 5667778889999999987532222211 5778899999987 4444
No 45
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=49.48 E-value=18 Score=35.84 Aligned_cols=23 Identities=26% Similarity=0.173 Sum_probs=18.6
Q ss_pred CHHHHHHHHHHcCCEEE--EeCCCC
Q 012942 253 LAEVAVQLIHRTGGLAV--LAHPWA 275 (453)
Q Consensus 253 ~~eeaI~~I~~aGGvaV--LAHP~~ 275 (453)
....+++.||+.|+.++ |.|+++
T Consensus 84 ~~~~~~~~vh~~G~~i~~QL~H~Gr 108 (340)
T 3gr7_A 84 GLRELVGLVKEHGAAIGIQLAHAGR 108 (340)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHHHhCCCeEEEEeccCCC
Confidence 46788999999999877 678764
No 46
>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ...
Probab=49.42 E-value=7.7 Score=39.13 Aligned_cols=29 Identities=28% Similarity=0.492 Sum_probs=26.6
Q ss_pred ceeEceeeeCcCCCCCCCHHHHHHHHHHcCCc
Q 012942 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVK 103 (453)
Q Consensus 72 ~~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~ 103 (453)
..+++||+|- ||+++|+.+.+.|+++|++
T Consensus 6 lPK~ELH~HL---~Gsl~p~tl~~La~~~~~~ 34 (367)
T 3iar_A 6 KPKVELHVHL---DGSIKPETILYYGRRRGIA 34 (367)
T ss_dssp SCEEECCBBG---GGSCCHHHHHHHHHHHTCC
T ss_pred CCeeEeeecc---cCCCCHHHHHHHHHhcCCC
Confidence 5689999997 8999999999999999975
No 47
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=49.40 E-value=29 Score=32.40 Aligned_cols=54 Identities=9% Similarity=0.011 Sum_probs=31.8
Q ss_pred ChHHHHHHHHHcCCcEEEEeCCCCChhhhhhhhhhhhHHHHHhHHHHHHHHHHHHcCCeeee
Q 012942 278 NPAAIIRKLKDVGLHGLEVYRSDGKLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLG 339 (453)
Q Consensus 278 ~~~~li~~l~~~GldGIEV~~~~~~~~~~~~~~~~~n~~~l~~~~~~~~~~lA~~~gLl~tg 339 (453)
...+.++.+++.|++|||+........ .... ..+ . .....+.++++++||-+++
T Consensus 31 ~~~~~l~~~~~~G~~~iEl~~~~~~~~-~~~~-~~~-~-----~~~~~~~~~l~~~gl~i~~ 84 (295)
T 3cqj_A 31 CWLERLQLAKTLGFDFVEMSVDETDER-LSRL-DWS-R-----EQRLALVNAIVETGVRVPS 84 (295)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCSSHHH-HGGG-GCC-H-----HHHHHHHHHHHHHCCEEEE
T ss_pred CHHHHHHHHHhcCCCEEEEecCCcccc-cCcc-cCC-H-----HHHHHHHHHHHHcCCeEEE
Confidence 346678888899999999986542110 0000 000 0 0112677889999998764
No 48
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A*
Probab=48.65 E-value=8.3 Score=38.15 Aligned_cols=29 Identities=34% Similarity=0.368 Sum_probs=26.4
Q ss_pred ceeEceeeeCcCCCCCCCHHHHHHHHHHcCCc
Q 012942 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVK 103 (453)
Q Consensus 72 ~~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~ 103 (453)
..+++||+|- ||+++|+.+.+.|+++|++
T Consensus 10 lPK~ELH~Hl---~Gsl~~~t~~~la~~~~~~ 38 (326)
T 3pao_A 10 LPKAELHLHL---EGTLEPELLFALAERNRIA 38 (326)
T ss_dssp SCEEECSBBG---GGGCCHHHHHHHHHHTTCC
T ss_pred CCceEEEecc---cCCCCHHHHHHHHHhcCCC
Confidence 4589999997 8999999999999999976
No 49
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=48.63 E-value=8.3 Score=38.47 Aligned_cols=30 Identities=37% Similarity=0.524 Sum_probs=27.1
Q ss_pred CceeEceeeeCcCCCCCCCHHHHHHHHHHcCCc
Q 012942 71 NNVVFELHSHSNFSDGYLSPSKLVERAHCNGVK 103 (453)
Q Consensus 71 ~~~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~ 103 (453)
...+++||+|- ||+++|+.+.+.|+++|++
T Consensus 12 ~lPK~ELH~Hl---~Gsl~p~tl~~la~~~~~~ 41 (343)
T 3rys_A 12 APPVAELHLHI---EGTLQPELIFALAERNGIE 41 (343)
T ss_dssp CCCEEECSBBG---GGGCCHHHHHHHHHHTTCC
T ss_pred cCCceeeEecC---ccCCCHHHHHHHHHhcCCC
Confidence 36799999997 8999999999999999976
No 50
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=47.82 E-value=25 Score=35.03 Aligned_cols=23 Identities=22% Similarity=0.208 Sum_probs=18.5
Q ss_pred CHHHHHHHHHHcCCEEE--EeCCCC
Q 012942 253 LAEVAVQLIHRTGGLAV--LAHPWA 275 (453)
Q Consensus 253 ~~eeaI~~I~~aGGvaV--LAHP~~ 275 (453)
....+++.||+.|+.++ |.|+++
T Consensus 82 ~~~~~~~~vh~~G~~i~~QL~H~Gr 106 (343)
T 3kru_A 82 ELKKIVDICKANGAVMGIQLAHAGR 106 (343)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHHhcCCceEeeehhhccC
Confidence 35678999999999877 678764
No 51
>1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3
Probab=47.05 E-value=15 Score=34.08 Aligned_cols=62 Identities=11% Similarity=0.097 Sum_probs=39.8
Q ss_pred eeEceeeeCcCCC---------CCCCHH---HHHHHHHHcCCcEEEEecCCCC-CCHHHHHHHHHhcCCeEEeEE
Q 012942 73 VVFELHSHSNFSD---------GYLSPS---KLVERAHCNGVKVLALTDHDTM-SGIPEAIETARRFGMKIIPGV 134 (453)
Q Consensus 73 ~~~DLH~HT~~SD---------G~~tp~---elv~~A~~~Gl~~IAITDHdt~-~g~~e~~~~a~~~gi~vI~Gi 134 (453)
-.+|.|+|-.... ...+++ +.+++|.+.|++.+..+-++.. ..+..+.+.+++.++.+++++
T Consensus 6 G~iD~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~iv~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 80 (291)
T 1bf6_A 6 GYTLAHEHLHIDLSGFKNNVDCRLDQYAFICQEMNDLMTRGVRNVIEMTNRYMGRNAQFMLDVMRETGINVVACT 80 (291)
T ss_dssp SEEEEEECSSEECHHHHTCGGGEECCHHHHHHHHHHHHHTTEEEEEECCCGGGTCCHHHHHHHHHHHCCEEEEEE
T ss_pred ceeeeccCeecCCcccccCCCcccCCHHHHHHHHHHHHHcCCCEEEecCCCcCCCCHHHHHHHHHhcCCeEEEee
Confidence 5789999976321 112233 3577888999998866554323 346677777777777666553
No 52
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=46.91 E-value=23 Score=32.33 Aligned_cols=43 Identities=7% Similarity=-0.065 Sum_probs=31.5
Q ss_pred ChHHHHHHHHHcCCcEEEEeCCCCChhhhhhhhhhhhHHHHHhHHHHHHHHHHHHcCCeeee
Q 012942 278 NPAAIIRKLKDVGLHGLEVYRSDGKLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLG 339 (453)
Q Consensus 278 ~~~~li~~l~~~GldGIEV~~~~~~~~~~~~~~~~~n~~~l~~~~~~~~~~lA~~~gLl~tg 339 (453)
...+.++.+++.|++|||+..+... +.+ .+.++++++||-+++
T Consensus 16 ~~~~~l~~~~~~G~~~vEl~~~~~~--~~~-----------------~~~~~l~~~gl~~~~ 58 (260)
T 1k77_A 16 PFIERFAAARKAGFDAVEFLFPYNY--STL-----------------QIQKQLEQNHLTLAL 58 (260)
T ss_dssp CGGGHHHHHHHHTCSEEECSCCTTS--CHH-----------------HHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHhCCCEEEecCCCCC--CHH-----------------HHHHHHHHcCCceEE
Confidence 3456788888999999999875321 111 577889999998775
No 53
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=46.78 E-value=21 Score=36.65 Aligned_cols=23 Identities=26% Similarity=0.281 Sum_probs=18.4
Q ss_pred CHHHHHHHHHHcCCEEE--EeCCCC
Q 012942 253 LAEVAVQLIHRTGGLAV--LAHPWA 275 (453)
Q Consensus 253 ~~eeaI~~I~~aGGvaV--LAHP~~ 275 (453)
....+++.||+.|+.++ |.|+++
T Consensus 105 ~~k~l~~avh~~G~~i~~QL~H~Gr 129 (419)
T 3l5a_A 105 GLTNMASTMKQHGSLAIIQLAHAGR 129 (419)
T ss_dssp HHHHHHHHHHTTSCEEEEEEECCGG
T ss_pred HHHHHHHHHHhcCCEEEEEeccCCC
Confidence 46778899999999877 688875
No 54
>3h4u_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified} PDB: 3hpa_A
Probab=46.64 E-value=33 Score=34.33 Aligned_cols=63 Identities=22% Similarity=0.318 Sum_probs=41.0
Q ss_pred ceeEceeeeCcCC--CCC---------------------CCHHHH-------HHHHHHcCCcEEEEecC----CCCCCHH
Q 012942 72 NVVFELHSHSNFS--DGY---------------------LSPSKL-------VERAHCNGVKVLALTDH----DTMSGIP 117 (453)
Q Consensus 72 ~~~~DLH~HT~~S--DG~---------------------~tp~el-------v~~A~~~Gl~~IAITDH----dt~~g~~ 117 (453)
+=+||.|+|...+ .|. .+++++ +..+.+.|+..+. || .....+.
T Consensus 87 PGlID~H~Hl~~~~~rg~~~~~~~~l~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~--d~~~~~~~~~~~~ 164 (479)
T 3h4u_A 87 PGLVNTHHHMYQSLTRAVPAAQNAELFGWLTNLYKIWAHLTPEMIEVSTLTAMAELLQSGCTTSS--DHLYIYPNGSRLD 164 (479)
T ss_dssp ECEEECCCCGGGGGSCSCTTTTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTTEEEEE--CCBCCCCTTCCHH
T ss_pred cceeecccccchhhhccccccCCCCHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHhCCeEEEE--ECccccCCcchHH
Confidence 4488999999766 221 466654 4556678876654 44 2233466
Q ss_pred HHHHHHHhcCCeEEeEEEE
Q 012942 118 EAIETARRFGMKIIPGVEI 136 (453)
Q Consensus 118 e~~~~a~~~gi~vI~GiEi 136 (453)
.+.+++...|++.+.+...
T Consensus 165 ~~~~~~~~~g~r~~~~~~~ 183 (479)
T 3h4u_A 165 DSIGAAQRIGMRFHASRGA 183 (479)
T ss_dssp HHHHHHHHHTCEEEEEEEE
T ss_pred HHHHHHHHcCCEEEEEeee
Confidence 6777778889987776544
No 55
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=46.44 E-value=45 Score=30.70 Aligned_cols=42 Identities=5% Similarity=0.133 Sum_probs=29.6
Q ss_pred ChHHHHHHHHHcCCcEEEEeCCCC--------ChhhhhhhhhhhhHHHHHhHHHHHHHHHHHHcCCe
Q 012942 278 NPAAIIRKLKDVGLHGLEVYRSDG--------KLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLL 336 (453)
Q Consensus 278 ~~~~li~~l~~~GldGIEV~~~~~--------~~~~~~~~~~~~n~~~l~~~~~~~~~~lA~~~gLl 336 (453)
...+.++.+++.|++|||++.... +..+. ..+.++++++||-
T Consensus 13 ~~~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~-----------------~~~~~~l~~~gl~ 62 (287)
T 2x7v_A 13 GFDRVPQDTVNIGGNSFQIFPHNARSWSAKLPSDEAA-----------------TKFKREMKKHGID 62 (287)
T ss_dssp CGGGHHHHHHHTTCSEEEECSCCCSSSCCCCCCHHHH-----------------HHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHcCCCEEEEeCCCcccccccCCCHHHH-----------------HHHHHHHHHcCCC
Confidence 456788889999999999974211 11111 2677889999997
No 56
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=45.76 E-value=54 Score=30.18 Aligned_cols=49 Identities=4% Similarity=-0.162 Sum_probs=39.0
Q ss_pred cCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcCCeEE
Q 012942 82 NFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKII 131 (453)
Q Consensus 82 ~~SDG~~tp~elv~~A~~~Gl~~IAITDHdt~~g~~e~~~~a~~~gi~vI 131 (453)
++.-+..++++.++.+++.|++.|-+..-. -....++.+.+++.||.+.
T Consensus 17 ~~~f~~~~~~~~l~~~~~~G~~~vEl~~~~-~~~~~~~~~~l~~~gl~~~ 65 (269)
T 3ngf_A 17 STMFNEVPFLERFRLAAEAGFGGVEFLFPY-DFDADVIARELKQHNLTQV 65 (269)
T ss_dssp TTSCTTSCHHHHHHHHHHTTCSEEECSCCT-TSCHHHHHHHHHHTTCEEE
T ss_pred hhhhccCCHHHHHHHHHHcCCCEEEecCCc-cCCHHHHHHHHHHcCCcEE
Confidence 334677899999999999999999997532 2357788888889998873
No 57
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=45.62 E-value=42 Score=30.02 Aligned_cols=65 Identities=17% Similarity=0.128 Sum_probs=41.5
Q ss_pred HHHHHHHHc-CCEEEEeCCCCCCChHHHHHHHHHcCCcEEEEeCCCCChhhhhhhhhhhhHHHHHhHHHHHHHHHHHHcC
Q 012942 256 VAVQLIHRT-GGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDGKLVDVNFLEKIDNFLLLLCLRQITYTDLADTYG 334 (453)
Q Consensus 256 eaI~~I~~a-GGvaVLAHP~~~~~~~~li~~l~~~GldGIEV~~~~~~~~~~~~~~~~~n~~~l~~~~~~~~~~lA~~~g 334 (453)
++|+.|++. .+++|.+|+.....+...++.+.++|.|+|=+.... ..+... .+.+.++++|
T Consensus 42 ~~i~~ir~~~~~~~i~~~~~~~~~~~~~~~~~~~~Gad~v~v~~~~-~~~~~~-----------------~~~~~~~~~g 103 (211)
T 3f4w_A 42 NAIKAIKEKYPHKEVLADAKIMDGGHFESQLLFDAGADYVTVLGVT-DVLTIQ-----------------SCIRAAKEAG 103 (211)
T ss_dssp HHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEETTS-CHHHHH-----------------HHHHHHHHHT
T ss_pred HHHHHHHHhCCCCEEEEEEEeccchHHHHHHHHhcCCCEEEEeCCC-ChhHHH-----------------HHHHHHHHcC
Confidence 567777776 478888887543333445788888899988885432 112111 4667788887
Q ss_pred Ceee
Q 012942 335 LLKL 338 (453)
Q Consensus 335 Ll~t 338 (453)
+.+.
T Consensus 104 ~~~~ 107 (211)
T 3f4w_A 104 KQVV 107 (211)
T ss_dssp CEEE
T ss_pred CeEE
Confidence 6544
No 58
>3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043}
Probab=44.97 E-value=19 Score=34.76 Aligned_cols=44 Identities=20% Similarity=0.172 Sum_probs=28.4
Q ss_pred hHHHHHHHHHc-CCcEEEEeCCCCChhhhhhhhhhhhHHHHHhHHHHHHHHHHHHcCCeeee
Q 012942 279 PAAIIRKLKDV-GLHGLEVYRSDGKLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLG 339 (453)
Q Consensus 279 ~~~li~~l~~~-GldGIEV~~~~~~~~~~~~~~~~~n~~~l~~~~~~~~~~lA~~~gLl~tg 339 (453)
..+.++.+++. |++|||+..+.....+.+ .+.++++++||-+++
T Consensus 35 ~~e~l~~aa~~~G~~~VEl~~~~~~~~~~~-----------------~l~~~l~~~Gl~i~~ 79 (333)
T 3ktc_A 35 TIDQINAAKEVGELSYVDLPYPFTPGVTLS-----------------EVKDALKDAGLKAIG 79 (333)
T ss_dssp HHHHHHHHHHHSSEEEEEEEESCSTTCCHH-----------------HHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHhCCCCEEEecCCCcchhHHH-----------------HHHHHHHHcCCeEEE
Confidence 35667777788 888888875543222221 567778888887653
No 59
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=44.78 E-value=27 Score=34.56 Aligned_cols=23 Identities=22% Similarity=0.169 Sum_probs=17.9
Q ss_pred CHHHHHHHHHHcCCEEE--EeCCCC
Q 012942 253 LAEVAVQLIHRTGGLAV--LAHPWA 275 (453)
Q Consensus 253 ~~eeaI~~I~~aGGvaV--LAHP~~ 275 (453)
....+++.||+.|+.++ |.|+++
T Consensus 82 ~~~~~~~~vh~~G~~i~~Ql~H~Gr 106 (349)
T 3hgj_A 82 GLKELARRIREAGAVPGIQLAHAGR 106 (349)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHHHhCCCeEEEEeccCCc
Confidence 45778899999999877 677653
No 60
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=44.73 E-value=33 Score=34.45 Aligned_cols=23 Identities=22% Similarity=0.264 Sum_probs=17.4
Q ss_pred CHHHHHHHHHHcCCEEE--EeCCCC
Q 012942 253 LAEVAVQLIHRTGGLAV--LAHPWA 275 (453)
Q Consensus 253 ~~eeaI~~I~~aGGvaV--LAHP~~ 275 (453)
....+++.||+.|+.++ |.|+++
T Consensus 92 ~~k~l~~avh~~G~~i~~QL~H~Gr 116 (376)
T 1icp_A 92 AWKPIVDAVHAKGGIFFCQIWHVGR 116 (376)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCTT
T ss_pred HHHHHHHHHHhcCCeEEEEeecCCC
Confidence 35677888999999766 788654
No 61
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=44.36 E-value=18 Score=33.62 Aligned_cols=14 Identities=21% Similarity=0.045 Sum_probs=7.6
Q ss_pred CCHHHHHHHHHHcC
Q 012942 252 PLAEVAVQLIHRTG 265 (453)
Q Consensus 252 ~~~eeaI~~I~~aG 265 (453)
.+++++++.++++|
T Consensus 15 ~~~~~~l~~~~~~G 28 (286)
T 3dx5_A 15 ISFTDIVQFAYENG 28 (286)
T ss_dssp CCHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHhC
Confidence 34555555555554
No 62
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=44.19 E-value=46 Score=31.96 Aligned_cols=70 Identities=9% Similarity=0.099 Sum_probs=47.5
Q ss_pred HHHHHHHHHHcCCEEEEeCCC-----CCCChHHHHHHHHHcCCcEEEEeCCCCChhhhhhhhhhhhHHHHHhHHHHHHHH
Q 012942 254 AEVAVQLIHRTGGLAVLAHPW-----ALKNPAAIIRKLKDVGLHGLEVYRSDGKLVDVNFLEKIDNFLLLLCLRQITYTD 328 (453)
Q Consensus 254 ~eeaI~~I~~aGGvaVLAHP~-----~~~~~~~li~~l~~~GldGIEV~~~~~~~~~~~~~~~~~n~~~l~~~~~~~~~~ 328 (453)
+.|-|++.|++|=-+..-..+ .....++.++..++.|++.||+....-+..... ..++.+
T Consensus 57 l~eki~l~~~~gV~v~~GGTl~E~~~~qg~~~~yl~~~k~lGf~~iEiS~G~i~l~~~~---------------~~~~I~ 121 (251)
T 1qwg_A 57 VKEKINYYKDWGIKVYPGGTLFEYAYSKGKFDEFLNECEKLGFEAVEISDGSSDISLEE---------------RNNAIK 121 (251)
T ss_dssp HHHHHHHHHTTTCEEEECHHHHHHHHHTTCHHHHHHHHHHHTCCEEEECCSSSCCCHHH---------------HHHHHH
T ss_pred HHHHHHHHHHcCCeEECCcHHHHHHHHcCcHHHHHHHHHHcCCCEEEECCCcccCCHHH---------------HHHHHH
Confidence 788899999988444332211 012446788888999999999998765433221 116778
Q ss_pred HHHHcCCeee
Q 012942 329 LADTYGLLKL 338 (453)
Q Consensus 329 lA~~~gLl~t 338 (453)
.++++|+.+.
T Consensus 122 ~~~~~G~~v~ 131 (251)
T 1qwg_A 122 RAKDNGFMVL 131 (251)
T ss_dssp HHHHTTCEEE
T ss_pred HHHHCCCEEe
Confidence 8999998774
No 63
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=43.76 E-value=26 Score=34.95 Aligned_cols=23 Identities=26% Similarity=0.221 Sum_probs=17.6
Q ss_pred CHHHHHHHHHHcCCEEE--EeCCCC
Q 012942 253 LAEVAVQLIHRTGGLAV--LAHPWA 275 (453)
Q Consensus 253 ~~eeaI~~I~~aGGvaV--LAHP~~ 275 (453)
....+++.||+.|+.++ |.|+++
T Consensus 81 ~~~~~~~~vh~~G~~i~~QL~H~Gr 105 (363)
T 3l5l_A 81 AFVPVVQAIKAAGSVPGIQIAHAGR 105 (363)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHHHhcCCEEEEEeccCCc
Confidence 35678899999999877 677653
No 64
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=42.88 E-value=46 Score=33.74 Aligned_cols=23 Identities=22% Similarity=0.222 Sum_probs=17.2
Q ss_pred CHHHHHHHHHHcCCEEE--EeCCCC
Q 012942 253 LAEVAVQLIHRTGGLAV--LAHPWA 275 (453)
Q Consensus 253 ~~eeaI~~I~~aGGvaV--LAHP~~ 275 (453)
....+++.||+.|+.++ |.|+++
T Consensus 94 ~~k~l~~avh~~G~~i~~QL~H~Gr 118 (402)
T 2hsa_B 94 EWKKIVDVVHAKGAVIFCQLWHVGR 118 (402)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCTT
T ss_pred HHHHHHHHHHhcCCeEEEEeccCCc
Confidence 35677889999999766 788654
No 65
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=42.30 E-value=30 Score=37.27 Aligned_cols=23 Identities=39% Similarity=0.410 Sum_probs=18.0
Q ss_pred CHHHHHHHHHHcCCEEE--EeCCCC
Q 012942 253 LAEVAVQLIHRTGGLAV--LAHPWA 275 (453)
Q Consensus 253 ~~eeaI~~I~~aGGvaV--LAHP~~ 275 (453)
...++++.||+.|+.++ |.|+++
T Consensus 90 ~~~~~~~~vh~~g~~i~~Ql~h~Gr 114 (690)
T 3k30_A 90 ALKRIADAIHEGGGLAGIELAHNGM 114 (690)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHHHhcCCEEEEEccCCcc
Confidence 45678899999999866 788654
No 66
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=41.98 E-value=63 Score=29.60 Aligned_cols=20 Identities=15% Similarity=0.459 Sum_probs=15.6
Q ss_pred hHHHHHHHHHcCCcEEEEeC
Q 012942 279 PAAIIRKLKDVGLHGLEVYR 298 (453)
Q Consensus 279 ~~~li~~l~~~GldGIEV~~ 298 (453)
..+.++.+.+.|+|+||++.
T Consensus 16 ~~~~~~~~~~~G~~~vEl~~ 35 (270)
T 3aam_A 16 VAGAVEEATALGLTAFQIFA 35 (270)
T ss_dssp HHHHHHHHHHHTCSCEEEES
T ss_pred HHHHHHHHHHcCCCEEEEeC
Confidence 35667778888999999965
No 67
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=41.56 E-value=9.1 Score=35.25 Aligned_cols=18 Identities=22% Similarity=0.067 Sum_probs=11.0
Q ss_pred CCHHHHHHHHHHcCCEEE
Q 012942 252 PLAEVAVQLIHRTGGLAV 269 (453)
Q Consensus 252 ~~~eeaI~~I~~aGGvaV 269 (453)
.+++++++.++++|--.|
T Consensus 18 ~~~~~~l~~~~~~G~~~v 35 (275)
T 3qc0_A 18 CGFAEAVDICLKHGITAI 35 (275)
T ss_dssp CCHHHHHHHHHHTTCCEE
T ss_pred CCHHHHHHHHHHcCCCEE
Confidence 466777777777664333
No 68
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=41.38 E-value=38 Score=34.62 Aligned_cols=22 Identities=18% Similarity=0.188 Sum_probs=17.1
Q ss_pred HHHHHHHHHHcCCEEE--EeCCCC
Q 012942 254 AEVAVQLIHRTGGLAV--LAHPWA 275 (453)
Q Consensus 254 ~eeaI~~I~~aGGvaV--LAHP~~ 275 (453)
...+++.||+.|+.++ |.|+++
T Consensus 94 ~k~l~~avH~~G~~i~~QL~H~Gr 117 (407)
T 3tjl_A 94 WKVITDKVHANGSFVSTQLIFLGR 117 (407)
T ss_dssp HHHHHHHHHHTTCEEEEEEECCGG
T ss_pred HHHHHHHHHhcCCEEEEEeccCCC
Confidence 5678888999999877 677764
No 69
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=40.01 E-value=35 Score=31.04 Aligned_cols=56 Identities=7% Similarity=-0.016 Sum_probs=40.2
Q ss_pred eeEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcCCeEE
Q 012942 73 VVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKII 131 (453)
Q Consensus 73 ~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~IAITDHdt~~g~~e~~~~a~~~gi~vI 131 (453)
|++-+|+.+.|. ..++++.++.+++.|++.|-+.-... ....++.+.+++.|+.+.
T Consensus 2 mklg~~~~~~~~--~~~~~~~l~~~~~~G~~~vEl~~~~~-~~~~~~~~~l~~~gl~~~ 57 (260)
T 1k77_A 2 PRFAANLSMMFT--EVPFIERFAAARKAGFDAVEFLFPYN-YSTLQIQKQLEQNHLTLA 57 (260)
T ss_dssp CCEEEETTTSST--TSCGGGHHHHHHHHTCSEEECSCCTT-SCHHHHHHHHHHTTCEEE
T ss_pred ceeEeehhhhhc--CCCHHHHHHHHHHhCCCEEEecCCCC-CCHHHHHHHHHHcCCceE
Confidence 444444443343 47899999999999999999875322 246778888888998765
No 70
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=39.78 E-value=42 Score=31.79 Aligned_cols=49 Identities=18% Similarity=0.021 Sum_probs=29.0
Q ss_pred HHHHHHHcCCcEEEEeCCCCChhhhhhhhhhhhHHHHHhHHHHHHHHHHHHcCCeeee
Q 012942 282 IIRKLKDVGLHGLEVYRSDGKLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLG 339 (453)
Q Consensus 282 li~~l~~~GldGIEV~~~~~~~~~~~~~~~~~n~~~l~~~~~~~~~~lA~~~gLl~tg 339 (453)
.+..+++.|++|||+......+.....+ .+ .....+.++++++||-+++
T Consensus 40 ~~~~a~~~G~~~vEl~~~~~~~~~~~~~--~~-------~~~~~~~~~l~~~Gl~i~~ 88 (316)
T 3qxb_A 40 AGLVRDDLGLEYVQYTYDLTDPWWPDIE--RD-------RRAIAYAKAFRKAGLTIES 88 (316)
T ss_dssp HHHHHHTSCCCEEEEETTTSCTTSCHHH--HH-------HHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHcCCCEEEeeccccCccccccc--hh-------hHHHHHHHHHHHcCCeEEE
Confidence 4455678999999998654322100000 00 0112677889999998765
No 71
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=38.73 E-value=20 Score=33.59 Aligned_cols=36 Identities=14% Similarity=0.111 Sum_probs=22.1
Q ss_pred ceeEceeeeCcCCC------------------CCCCHHHHHHHHHHcCCcEEEE
Q 012942 72 NVVFELHSHSNFSD------------------GYLSPSKLVERAHCNGVKVLAL 107 (453)
Q Consensus 72 ~~~~DLH~HT~~SD------------------G~~tp~elv~~A~~~Gl~~IAI 107 (453)
|+.||.|+|-...+ ...+++++++.+.+.|++...+
T Consensus 1 m~~ID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~m~~~GV~~~v~ 54 (307)
T 2f6k_A 1 MSKIDFHTHYLPTSYVEALKRHVPGDPDGWPTPEWTPQLTLNFMRDNDISYSIL 54 (307)
T ss_dssp -CEEEEEEECCCHHHHHHHHHHCCSSGGGSCCCCCCHHHHHHHHHHTTEEEEEE
T ss_pred CCeEEEecCcCCHHHHHHHHHhccCCcccCcCCCCCHHHHHHHHHHcCCCEEEE
Confidence 35799999965321 1256666666666666666444
No 72
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=38.67 E-value=38 Score=30.85 Aligned_cols=15 Identities=13% Similarity=0.240 Sum_probs=10.9
Q ss_pred CCHHHHHHHHHHcCC
Q 012942 252 PLAEVAVQLIHRTGG 266 (453)
Q Consensus 252 ~~~eeaI~~I~~aGG 266 (453)
.+++++++.++++|-
T Consensus 14 ~~~~~~l~~~~~~G~ 28 (278)
T 1i60_A 14 SNLKLDLELCEKHGY 28 (278)
T ss_dssp CCHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHhCC
Confidence 567777787777763
No 73
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=38.57 E-value=55 Score=32.61 Aligned_cols=23 Identities=17% Similarity=0.109 Sum_probs=17.0
Q ss_pred CHHHHHHHHHHcCCEEE--EeCCCC
Q 012942 253 LAEVAVQLIHRTGGLAV--LAHPWA 275 (453)
Q Consensus 253 ~~eeaI~~I~~aGGvaV--LAHP~~ 275 (453)
....+++.||+.|+.++ |.|+++
T Consensus 82 ~~~~l~~~vh~~g~~i~~QL~H~Gr 106 (365)
T 2gou_A 82 GWRIVTEAVHAKGCAIFAQLWHVGR 106 (365)
T ss_dssp HHHHHHHHHHHHSCEEEEEEECCTT
T ss_pred HHHHHHHHHHhcCCeEEEEeecCCC
Confidence 35677888999998755 788554
No 74
>3lnp_A Amidohydrolase family protein OLEI01672_1_465; TIM barrel, beta-fold, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Oleispira antarctica}
Probab=38.45 E-value=55 Score=32.58 Aligned_cols=62 Identities=16% Similarity=0.118 Sum_probs=40.5
Q ss_pred ceeEceeeeCcCC--CC---------------------CCCHHHH-------HHHHHHcCCcEEEEecCCCCCCHHHHHH
Q 012942 72 NVVFELHSHSNFS--DG---------------------YLSPSKL-------VERAHCNGVKVLALTDHDTMSGIPEAIE 121 (453)
Q Consensus 72 ~~~~DLH~HT~~S--DG---------------------~~tp~el-------v~~A~~~Gl~~IAITDHdt~~g~~e~~~ 121 (453)
+-+||.|+|...+ .| ..+++++ +..+.+.|+..+. |+. .....+.+
T Consensus 86 PGlID~H~H~~~~~~~g~~~~~~l~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~--d~~--~~~~~~~~ 161 (468)
T 3lnp_A 86 PGWVNAHGHAAMSLFRGLADDLPLMTWLQEHVWPAEAQHVDEHFVKQGTELAIAEMIQSGTTTFA--DMY--FYPQQSGE 161 (468)
T ss_dssp ECEEECSCCGGGGGGTTSSCSCCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEE--ECC--SCHHHHHH
T ss_pred eCeechhhChhhhhhccCcCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEE--Ecc--cCHHHHHH
Confidence 4489999999544 22 2666654 4556788977664 542 23455667
Q ss_pred HHHhcCCeEEeEEEEE
Q 012942 122 TARRFGMKIIPGVEIS 137 (453)
Q Consensus 122 ~a~~~gi~vI~GiEis 137 (453)
.+.+.|++.+.+..+.
T Consensus 162 ~~~~~g~r~~~~~~~~ 177 (468)
T 3lnp_A 162 AALAAGIRAVCFAPVL 177 (468)
T ss_dssp HHHHHTCEEEEEEEEC
T ss_pred HHHHcCCeEEEecccc
Confidence 7778898887766654
No 75
>1914_A Signal recognition particle 9/14 fusion protein; ALU domain, RNA binding, signal recognition particle (SRP), translation regulation; 2.53A {Mus musculus} SCOP: d.49.1.1 d.49.1.1 PDB: 1e8o_A* 1e8s_A 1ry1_C*
Probab=38.33 E-value=5.9 Score=37.72 Aligned_cols=31 Identities=32% Similarity=0.517 Sum_probs=7.2
Q ss_pred cccccchhhhhhhccCCCCCCCCcHHHhhhc
Q 012942 7 VEKRSKDKKKKKKQKRGGGKKKMTAEQSLAF 37 (453)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~k~~~~~~~~~a~ 37 (453)
..||++|||+|+++..-+.+++++-++.+..
T Consensus 113 LKKrdKKkkKk~~~~~k~~~~~~~~~~~~~~ 143 (232)
T 1914_A 113 LKKRDKKNKSKKSKPAQGGEQKLISEEDDSA 143 (232)
T ss_dssp SBCC-----------CCEEEEEC--------
T ss_pred cCccccchhhhhhhhhhhhhhhhhhhhhccc
Confidence 5677776666666655555566655554433
No 76
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=37.90 E-value=41 Score=31.19 Aligned_cols=49 Identities=10% Similarity=0.138 Sum_probs=34.1
Q ss_pred HHHHHHHHHcCCcEEEEeCCCCC---hhhhhhhhhhhhHHHHHhHHHHHHHHHHHHcCCeeeec-cCCCC
Q 012942 280 AAIIRKLKDVGLHGLEVYRSDGK---LVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLGG-SDYHG 345 (453)
Q Consensus 280 ~~li~~l~~~GldGIEV~~~~~~---~~~~~~~~~~~n~~~l~~~~~~~~~~lA~~~gLl~tgG-SDfHg 345 (453)
.+.++.+++.|++|||+...... ..+. ..+.++++++||-+++. ..+++
T Consensus 24 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~-----------------~~~~~~l~~~gl~~~~~~~~~~g 76 (290)
T 3tva_A 24 GVHLEVAQDLKVPTVQVHAPHPHTRTREHA-----------------QAFRAKCDAAGIQVTVIFGGFDG 76 (290)
T ss_dssp SBCHHHHHHTTCSEEEEECCCGGGCSHHHH-----------------HHHHHHHHHTTCEEEEEECCCTT
T ss_pred HHHHHHHHHcCCCEEEecCCCCCcCCHHHH-----------------HHHHHHHHHcCCEEEEEeeccCC
Confidence 35678889999999999975321 1211 26788999999987764 34444
No 77
>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15
Probab=37.36 E-value=17 Score=33.93 Aligned_cols=57 Identities=7% Similarity=-0.016 Sum_probs=37.8
Q ss_pred CceeEceeeeCcCCC------------CCCCHHHHHHHHHHcCCcEEEEecCC-CCCCHHHHHHHHHhcC
Q 012942 71 NNVVFELHSHSNFSD------------GYLSPSKLVERAHCNGVKVLALTDHD-TMSGIPEAIETARRFG 127 (453)
Q Consensus 71 ~~~~~DLH~HT~~SD------------G~~tp~elv~~A~~~Gl~~IAITDHd-t~~g~~e~~~~a~~~g 127 (453)
.++.||.|+|-...+ ...+++++++.+.+.|++...+.--+ .......+.+.+++.+
T Consensus 11 ~~~iID~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~l~~m~~~GV~~~v~~~~~~~~~~n~~~~~~~~~~p 80 (288)
T 2ffi_A 11 HLTAIDSHAHVFSRGLNLASQRRYAPNYDAPLGDYLGQLRAHGFSHGVLVQPSFLGTDNRYLLSALQTVP 80 (288)
T ss_dssp CCCCEEBCCCCBCHHHHHHTTCCSSCCSCBCHHHHHHHHHHTSCCEECCBCCGGGTTCCHHHHHHHHHST
T ss_pred CCCceeecccccCCCCCCCCcccCCCCCCCCHHHHHHHHHHhCCCeEEEECCccccccHHHHHHHHHHCC
Confidence 357899999975321 14789999999999999977665421 1122344556666543
No 78
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=37.07 E-value=53 Score=31.36 Aligned_cols=50 Identities=24% Similarity=0.208 Sum_probs=31.6
Q ss_pred HHHHHHHHcCCcEEEEeCCCCChhhhhhhhhhhhHHHHHhHHHHHHHHHHHHcCCe---eeec
Q 012942 281 AIIRKLKDVGLHGLEVYRSDGKLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLL---KLGG 340 (453)
Q Consensus 281 ~li~~l~~~GldGIEV~~~~~~~~~~~~~~~~~n~~~l~~~~~~~~~~lA~~~gLl---~tgG 340 (453)
+.++.+++.|++|||+........... .+. .....+.++++++||- +++.
T Consensus 35 ~~l~~~~~~G~~~vEl~~~~~~~~~~~----~~~------~~~~~l~~~l~~~gL~~~~i~~~ 87 (335)
T 2qw5_A 35 AHIKKLQRFGYSGFEFPIAPGLPENYA----QDL------ENYTNLRHYLDSEGLENVKISTN 87 (335)
T ss_dssp HHHHHHHHTTCCEEEEECCCCCGGGHH----HHH------HHHHHHHHHHHHTTCTTCEEEEE
T ss_pred HHHHHHHHhCCCEEEEecCCCcccccc----cch------HHHHHHHHHHHHCCCCcceeEEE
Confidence 678888899999999986432211000 000 0112677889999998 7764
No 79
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=36.25 E-value=54 Score=29.95 Aligned_cols=59 Identities=7% Similarity=0.013 Sum_probs=42.0
Q ss_pred CCceeEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCC-----CCHHHHHHHHHhcCCeEE
Q 012942 70 DNNVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTM-----SGIPEAIETARRFGMKII 131 (453)
Q Consensus 70 ~~~~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~IAITDHdt~-----~g~~e~~~~a~~~gi~vI 131 (453)
...|++-+++.|... .++++.++.+++.|++.|=+....-. ....++.+.+++.||.+.
T Consensus 15 ~~~~klg~~~~~~~~---~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~ 78 (257)
T 3lmz_A 15 VNPFHLGMAGYTFVN---FDLDTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGY 78 (257)
T ss_dssp CCSSEEEECGGGGTT---SCHHHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEE
T ss_pred CCceEEEEEEEeecC---CCHHHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEE
Confidence 445666665555433 68999999999999999999865311 113566777888898764
No 80
>4f0r_A 5-methylthioadenosine/S-adenosylhomocysteine DEAM; structural genomics, PSI-biology; HET: MSE MTA; 1.80A {Chromobacterium violaceum} PDB: 4f0s_A*
Probab=36.07 E-value=60 Score=32.02 Aligned_cols=62 Identities=19% Similarity=0.208 Sum_probs=40.4
Q ss_pred ceeEceeeeCcCC--CC---------------------CCCHHH-------HHHHHHHcCCcEEEEecCCCCCCHHHHHH
Q 012942 72 NVVFELHSHSNFS--DG---------------------YLSPSK-------LVERAHCNGVKVLALTDHDTMSGIPEAIE 121 (453)
Q Consensus 72 ~~~~DLH~HT~~S--DG---------------------~~tp~e-------lv~~A~~~Gl~~IAITDHdt~~g~~e~~~ 121 (453)
+-++|.|+|...+ .| ..++++ .+..+.+.|+..+. |+ ......+.+
T Consensus 64 PGlID~H~Hl~~~~~~g~~~~~~~~~wl~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~--d~--~~~~~~~~~ 139 (447)
T 4f0r_A 64 PGLINLHGHSAMSLLRGLADDKALMDWLTNYIWPTEGKHVHDDFVFDGSLLAMGEMIRGGTTTIN--DM--YFYNAAVAR 139 (447)
T ss_dssp ECEEEEEECGGGGGGTTSSCSSCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEE--EC--BSCHHHHHH
T ss_pred eCccchhhChhhHhhccCCCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEE--Ec--ccCHHHHHH
Confidence 4589999999554 22 256664 35557778988765 43 223455667
Q ss_pred HHHhcCCeEEeEEEEE
Q 012942 122 TARRFGMKIIPGVEIS 137 (453)
Q Consensus 122 ~a~~~gi~vI~GiEis 137 (453)
++.+.|++.+.+..+.
T Consensus 140 ~~~~~g~r~~~~~~~~ 155 (447)
T 4f0r_A 140 AGLASGMRTFVGCSIL 155 (447)
T ss_dssp HHHHHTCEEEEEEEEC
T ss_pred HHHHcCCeEEEEchhc
Confidence 7777888887776553
No 81
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=35.91 E-value=48 Score=33.03 Aligned_cols=23 Identities=17% Similarity=0.052 Sum_probs=16.3
Q ss_pred CHHHHHHHHHHcCCEEE--EeCCCC
Q 012942 253 LAEVAVQLIHRTGGLAV--LAHPWA 275 (453)
Q Consensus 253 ~~eeaI~~I~~aGGvaV--LAHP~~ 275 (453)
....+++.||+.|+.++ |.|+++
T Consensus 82 ~~~~l~~~vh~~g~~i~~QL~H~Gr 106 (364)
T 1vyr_A 82 AWKKITAGVHAEDGRIAVQLWHTGR 106 (364)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCTT
T ss_pred HHHHHHHHHHhcCCeEEEEeccCCc
Confidence 35667788888888655 778654
No 82
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=35.45 E-value=96 Score=29.03 Aligned_cols=44 Identities=9% Similarity=0.082 Sum_probs=29.8
Q ss_pred hHHHHHHHHHcCCcEEEEeCCCCC--------hhhhhhhhhhhhHHHHHhHHHHHHHHHHHHcCC-eeee
Q 012942 279 PAAIIRKLKDVGLHGLEVYRSDGK--------LVDVNFLEKIDNFLLLLCLRQITYTDLADTYGL-LKLG 339 (453)
Q Consensus 279 ~~~li~~l~~~GldGIEV~~~~~~--------~~~~~~~~~~~n~~~l~~~~~~~~~~lA~~~gL-l~tg 339 (453)
..+.++.+++.|++|||++..... ..+. ..+.++++++|| .+++
T Consensus 20 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~-----------------~~~~~~l~~~gl~~~~~ 72 (303)
T 3aal_A 20 LLAASEEAASYGANTFMIYTGAPQNTKRKSIEELNI-----------------EAGRQHMQAHGIEEIVV 72 (303)
T ss_dssp HHHHHHHHHHTTCSEEEEESSCTTCCCCCCSGGGCH-----------------HHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHcCCCEEEEcCCCCCccCCCCCCHHHH-----------------HHHHHHHHHcCCceEEE
Confidence 567788888999999999632210 1111 267788999999 5554
No 83
>4dyk_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO PSI-biology, NEW YORK structural genomics research consorti hydrolase; 2.00A {Pseudomonas aeruginosa}
Probab=35.35 E-value=48 Score=32.78 Aligned_cols=62 Identities=15% Similarity=0.204 Sum_probs=40.2
Q ss_pred ceeEceeeeCcCC--CC---------------------CCCHHHH-------HHHHHHcCCcEEEEecCCCCCCHHHHHH
Q 012942 72 NVVFELHSHSNFS--DG---------------------YLSPSKL-------VERAHCNGVKVLALTDHDTMSGIPEAIE 121 (453)
Q Consensus 72 ~~~~DLH~HT~~S--DG---------------------~~tp~el-------v~~A~~~Gl~~IAITDHdt~~g~~e~~~ 121 (453)
+=++|+|+|...+ .| ..+++++ +..+.+.|+..+. |+. .....+.+
T Consensus 66 PG~ID~H~H~~~~~~~g~~~~~~l~~wl~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~--d~~--~~~~~~~~ 141 (451)
T 4dyk_A 66 PGLVNAHGHSAMSLFRGLADDLPLMTWLQDHIWPAEGQWVSEDFIRDGTELAIAEQVKGGITCFS--DMY--FYPQAICG 141 (451)
T ss_dssp ECEEECCCCGGGGGGTTSSCSSCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEE--EEC--SCHHHHHH
T ss_pred ecccchhhChhhHHhccCCCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEE--Ecc--cCHHHHHH
Confidence 4588999999544 22 2566643 4455688987764 552 23455667
Q ss_pred HHHhcCCeEEeEEEEE
Q 012942 122 TARRFGMKIIPGVEIS 137 (453)
Q Consensus 122 ~a~~~gi~vI~GiEis 137 (453)
++.+.|++.+.+..+.
T Consensus 142 a~~~~g~r~~~~~~~~ 157 (451)
T 4dyk_A 142 VVHDSGVRAQVAIPVL 157 (451)
T ss_dssp HHHHHTCEEEEEEEEC
T ss_pred HHHHcCCeEEEEchhh
Confidence 7778898888776654
No 84
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=35.12 E-value=88 Score=30.39 Aligned_cols=83 Identities=14% Similarity=0.065 Sum_probs=52.6
Q ss_pred cCCEEEEeCCCCCCC--hHHHHHHHHHcCCcEEEEeCCCCChhhhhhhhhhhhHHHHHhHHHHHHHHHHHHcC--Ceeee
Q 012942 264 TGGLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDGKLVDVNFLEKIDNFLLLLCLRQITYTDLADTYG--LLKLG 339 (453)
Q Consensus 264 aGGvaVLAHP~~~~~--~~~li~~l~~~GldGIEV~~~~~~~~~~~~~~~~~n~~~l~~~~~~~~~~lA~~~g--Ll~tg 339 (453)
+|.++|+|+-+.... ..++.+...+.|.||+=+..|++.+.+.. + ...|.++|+.-+ +++.-
T Consensus 74 ~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~~~~s~~~----l----------~~~f~~va~a~~~~lPiil 139 (313)
T 3dz1_A 74 AKSMQVIVGVSAPGFAAMRRLARLSMDAGAAGVMIAPPPSLRTDEQ----I----------TTYFRQATEAIGDDVPWVL 139 (313)
T ss_dssp CTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCTTCCSHHH----H----------HHHHHHHHHHHCTTSCEEE
T ss_pred cCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHH----H----------HHHHHHHHHhCCCCCcEEE
Confidence 388999999875432 22455566788999999998876544322 1 127788888876 66553
Q ss_pred ccCCCCCCCCCCcccCCccCChhHHHHHhc
Q 012942 340 GSDYHGRGGHGESELGSVKLPVLVLNDFLK 369 (453)
Q Consensus 340 GSDfHg~~~~~~~~lG~~~~p~~~~~~~~~ 369 (453)
||-|. ...+.++.+++.+|.+
T Consensus 140 ---Yn~P~------~tg~~l~~~~~~~La~ 160 (313)
T 3dz1_A 140 ---QDYPL------TLSVVMTPKVIRQIVM 160 (313)
T ss_dssp ---EECHH------HHCCCCCHHHHHHHHH
T ss_pred ---EeCcc------ccCcCCCHHHHHHHHH
Confidence 44331 1234567777777753
No 85
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=34.64 E-value=46 Score=30.88 Aligned_cols=60 Identities=12% Similarity=0.011 Sum_probs=40.7
Q ss_pred eeEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCC----CCCHHHHHHHHHhcCCeEEe
Q 012942 73 VVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDT----MSGIPEAIETARRFGMKIIP 132 (453)
Q Consensus 73 ~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~IAITDHdt----~~g~~e~~~~a~~~gi~vI~ 132 (453)
|++-+|+.+...+-..++++.++.+++.|++.|-+....- -....++.+.+++.|+.+..
T Consensus 2 Mkigi~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~i~~ 65 (294)
T 3vni_A 2 MKHGIYYAYWEQEWEADYKYYIEKVAKLGFDILEIAASPLPFYSDIQINELKACAHGNGITLTV 65 (294)
T ss_dssp CCEEEEGGGGCSSSCCCHHHHHHHHHHHTCSEEEEESTTGGGCCHHHHHHHHHHHHHTTCEEEE
T ss_pred eeEEEehhhhcCCcCcCHHHHHHHHHHcCCCEEEecCcccCCcCHHHHHHHHHHHHHcCCeEEE
Confidence 3444454444333335899999999999999999985431 11245667777889987754
No 86
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=34.55 E-value=33 Score=31.88 Aligned_cols=44 Identities=14% Similarity=0.014 Sum_probs=30.1
Q ss_pred CCCHHHHHHHHHHcCCEEE-EeCCCCCCChHHHHHHHHHcCCcEEEE
Q 012942 251 EPLAEVAVQLIHRTGGLAV-LAHPWALKNPAAIIRKLKDVGLHGLEV 296 (453)
Q Consensus 251 ~~~~eeaI~~I~~aGGvaV-LAHP~~~~~~~~li~~l~~~GldGIEV 296 (453)
..+++++++.++++|--.| +.+++. ...++-+.+.+.||.-.-+
T Consensus 30 ~~~~~~~l~~~~~~G~~~vEl~~~~~--~~~~~~~~l~~~gl~~~~~ 74 (301)
T 3cny_A 30 DNNLQQLLSDIVVAGFQGTEVGGFFP--GPEKLNYELKLRNLEIAGQ 74 (301)
T ss_dssp TCCHHHHHHHHHHHTCCEECCCTTCC--CHHHHHHHHHHTTCEECEE
T ss_pred CCCHHHHHHHHHHhCCCEEEecCCCC--CHHHHHHHHHHCCCeEEEE
Confidence 3689999999999986555 456653 4555666677778754333
No 87
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}
Probab=34.49 E-value=14 Score=35.21 Aligned_cols=34 Identities=21% Similarity=0.151 Sum_probs=25.7
Q ss_pred eeEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCC
Q 012942 73 VVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHD 111 (453)
Q Consensus 73 ~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~IAITDHd 111 (453)
|++|-|||-.... . +.+++|++.|++.+.++-.+
T Consensus 1 m~iDtH~Hld~~~----~-~~l~~a~~~GV~~~i~~~~~ 34 (261)
T 3guw_A 1 MYFDSHLHSEGLG----F-SELVKLKENGIKEVCSLAFF 34 (261)
T ss_dssp -CCBCCCCGGGCC----H-HHHHHHHTTSCCEECCBCCC
T ss_pred CeEEeccCCCCCC----h-HHHHHHHHCCCcEEEEeccC
Confidence 5789999987543 1 35789999999998876554
No 88
>2z00_A Dihydroorotase; zinc binding protein, hydrolase, metal-binding, pyrimidine biosynthesis, structural genomics, NPPSFA; 2.42A {Thermus thermophilus}
Probab=34.42 E-value=38 Score=33.12 Aligned_cols=61 Identities=16% Similarity=0.133 Sum_probs=38.6
Q ss_pred ceeEceeeeCcCC--CCCCCHHHHHHHHHHcCCcEEEEecCC-CC----CCHHHHHHHHHhcC-CeEEe
Q 012942 72 NVVFELHSHSNFS--DGYLSPSKLVERAHCNGVKVLALTDHD-TM----SGIPEAIETARRFG-MKIIP 132 (453)
Q Consensus 72 ~~~~DLH~HT~~S--DG~~tp~elv~~A~~~Gl~~IAITDHd-t~----~g~~e~~~~a~~~g-i~vI~ 132 (453)
+-++|.|+|...+ +-..+.....+.+.+.|+..+..+-+. .. ..+..+.+.+++.+ +.+++
T Consensus 49 PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (426)
T 2z00_A 49 PGFLDLHAHLREPGEEVKEDLFSGLLAAVRGGYTDLVSMPNTKPPVDTPEAVRALKEKAKALGLARLHP 117 (426)
T ss_dssp ECEEEEEECCCTTTCTTTCCHHHHHHHHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHTSSEECC
T ss_pred cCEEEeccccCCCCCCchHHHHHHHHHHHhCCccEEEecCCCCCCcChHHHHHHHHHHhcccCcccEEE
Confidence 3488999998764 123457788899999999987665321 11 12344555556666 66543
No 89
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=34.00 E-value=49 Score=31.52 Aligned_cols=14 Identities=7% Similarity=0.033 Sum_probs=7.3
Q ss_pred CHHHHHHHHHHcCC
Q 012942 253 LAEVAVQLIHRTGG 266 (453)
Q Consensus 253 ~~eeaI~~I~~aGG 266 (453)
+++++++.++++|-
T Consensus 37 ~l~~~l~~aa~~G~ 50 (305)
T 3obe_A 37 DMPNGLNRLAKAGY 50 (305)
T ss_dssp THHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHcCC
Confidence 45555555555553
No 90
>4dzh_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO YORK structural genomics research consortium; 1.55A {Xanthomonas campestris PV}
Probab=33.50 E-value=67 Score=32.23 Aligned_cols=62 Identities=13% Similarity=0.242 Sum_probs=40.7
Q ss_pred ceeEceeeeCcCC--CC---------------------CCCHHHH-------HHHHHHcCCcEEEEecCCCCCCHHHHHH
Q 012942 72 NVVFELHSHSNFS--DG---------------------YLSPSKL-------VERAHCNGVKVLALTDHDTMSGIPEAIE 121 (453)
Q Consensus 72 ~~~~DLH~HT~~S--DG---------------------~~tp~el-------v~~A~~~Gl~~IAITDHdt~~g~~e~~~ 121 (453)
+-+||.|+|...+ .| ..+++++ +..+.+.|+..+. |+. .....+.+
T Consensus 73 PGlID~H~Hl~~~~~~g~~~~~~l~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~--d~~--~~~~~~~~ 148 (472)
T 4dzh_A 73 PGLVNAHTHNPMTLLRGVADDLPLMVWLQQHIWPVEAAVIGPEFVADGTTLAIAEMLRGGTTCVN--ENY--FFADVQAA 148 (472)
T ss_dssp ECEEEEEECGGGGGGTTSSCSCCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEE--EEC--SCHHHHHH
T ss_pred ECccccccChhhHHhccccCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEE--Ecc--cCHHHHHH
Confidence 4588999999764 22 2455543 3447788987765 554 23455667
Q ss_pred HHHhcCCeEEeEEEEE
Q 012942 122 TARRFGMKIIPGVEIS 137 (453)
Q Consensus 122 ~a~~~gi~vI~GiEis 137 (453)
.+.+.|++.+.+..+.
T Consensus 149 a~~~~g~r~~~~~~~~ 164 (472)
T 4dzh_A 149 VYKQHGFRALVGAVII 164 (472)
T ss_dssp HHHHTTCEEEEEEEEC
T ss_pred HHHHhCCeEEEEeccc
Confidence 7778899888776553
No 91
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=33.46 E-value=51 Score=33.11 Aligned_cols=23 Identities=26% Similarity=0.187 Sum_probs=16.3
Q ss_pred CHHHHHHHHHHcCCEEE--EeCCCC
Q 012942 253 LAEVAVQLIHRTGGLAV--LAHPWA 275 (453)
Q Consensus 253 ~~eeaI~~I~~aGGvaV--LAHP~~ 275 (453)
....+++.||+.|+.++ |.|+++
T Consensus 86 ~~k~l~~avh~~G~~i~~QL~H~Gr 110 (377)
T 2r14_A 86 GWKGVVEAVHAKGGRIALQLWHVGR 110 (377)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCTT
T ss_pred HHHHHHHHHhhcCCeEEEEccCCcc
Confidence 35667788899888655 778544
No 92
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=33.45 E-value=77 Score=29.01 Aligned_cols=44 Identities=5% Similarity=0.152 Sum_probs=30.1
Q ss_pred CChHHHHHHHHHcCCcEEEEeCCCC--------ChhhhhhhhhhhhHHHHHhHHHHHHHHHHHHcCCee
Q 012942 277 KNPAAIIRKLKDVGLHGLEVYRSDG--------KLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLK 337 (453)
Q Consensus 277 ~~~~~li~~l~~~GldGIEV~~~~~--------~~~~~~~~~~~~n~~~l~~~~~~~~~~lA~~~gLl~ 337 (453)
....+.++.+++.|++|||++.... +..+. ..+.++++++||-+
T Consensus 12 ~~l~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~-----------------~~~~~~l~~~gl~~ 63 (285)
T 1qtw_A 12 GGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTI-----------------DEFKAACEKYHYTS 63 (285)
T ss_dssp TCHHHHHHHHHHTTCSEEECCSSCSSCSSCCCCCHHHH-----------------HHHHHHHHHTTCCG
T ss_pred cCHHHHHHHHHHcCCCEEEeeCCCCCcCcCCCCCHHHH-----------------HHHHHHHHHcCCCc
Confidence 3456788888999999999963211 11111 26778899999973
No 93
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=33.25 E-value=61 Score=30.02 Aligned_cols=56 Identities=9% Similarity=-0.004 Sum_probs=41.2
Q ss_pred ceeEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcCCeE
Q 012942 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKI 130 (453)
Q Consensus 72 ~~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~IAITDHdt~~g~~e~~~~a~~~gi~v 130 (453)
+|++-++..+. ...++++.++.+++.|++.|-+...+.-....++.+.+++.||.+
T Consensus 25 ~mklg~~~~~~---~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gl~v 80 (287)
T 3kws_A 25 ELKLSFQEGIA---PGESLNEKLDFMEKLGVVGFEPGGGGLAGRVNEIKQALNGRNIKV 80 (287)
T ss_dssp CCEEEEETTSS---CCSSHHHHHHHHHHTTCCEEECBSTTCGGGHHHHHHHHTTSSCEE
T ss_pred eeeEEEEeccc---CCCCHHHHHHHHHHcCCCEEEecCCchHHHHHHHHHHHHHcCCeE
Confidence 45554443332 226999999999999999999988754455677778888888876
No 94
>2pgf_A Adenosine deaminase; metallo-dependent hydrolase, structural genomics, medical ST genomics of pathogenic protozoa consortium, MSGPP; HET: MSE ADN; 1.89A {Plasmodium vivax} PDB: 2pgr_A* 2qvn_A* 3ewc_A* 3ewd_A* 2amx_A
Probab=33.24 E-value=25 Score=35.13 Aligned_cols=29 Identities=24% Similarity=0.171 Sum_probs=25.7
Q ss_pred ceeEceeeeCcCCCCCCCHHHHHHHHHHcCCc
Q 012942 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVK 103 (453)
Q Consensus 72 ~~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~ 103 (453)
..+++||+|- ||.++|+.+++.|+++|++
T Consensus 44 lPK~eLH~Hl---~gsl~~~~l~~la~~~~~~ 72 (371)
T 2pgf_A 44 IPKCELHCHL---DLCFSADFFVSCIRKYNLQ 72 (371)
T ss_dssp SCEEEEEEEG---GGCCCHHHHHHHHHHTTCC
T ss_pred CcHhhheeCC---ccCCCHHHHHHHHHHcCCC
Confidence 5678999997 8999999999999999853
No 95
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=32.76 E-value=55 Score=30.14 Aligned_cols=45 Identities=11% Similarity=0.147 Sum_probs=34.6
Q ss_pred CCHHHHHHHHHHcCCcEEEEecCCCC----CCHHHHHHHHHhcCCeEEe
Q 012942 88 LSPSKLVERAHCNGVKVLALTDHDTM----SGIPEAIETARRFGMKIIP 132 (453)
Q Consensus 88 ~tp~elv~~A~~~Gl~~IAITDHdt~----~g~~e~~~~a~~~gi~vI~ 132 (453)
.++++.++.+++.|++.|-|.-.+.. ....++.+.+++.||.+..
T Consensus 17 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~ 65 (290)
T 2qul_A 17 VDFPATAKRIAGLGFDLMEISLGEFHNLSDAKKRELKAVADDLGLTVMC 65 (290)
T ss_dssp CCHHHHHHHHHHTTCSEEEEESTTGGGSCHHHHHHHHHHHHHHTCEEEE
T ss_pred ccHHHHHHHHHHhCCCEEEEecCCccccchhhHHHHHHHHHHcCCceEE
Confidence 57999999999999999999865432 2345667777888887654
No 96
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=32.68 E-value=33 Score=32.42 Aligned_cols=45 Identities=20% Similarity=0.272 Sum_probs=31.5
Q ss_pred hHHHHHHHHHcCCcEEEEeCCC-CC--hhhhhhhhhhhhHHHHHhHHHHHHHHHHHHcCCeeeecc
Q 012942 279 PAAIIRKLKDVGLHGLEVYRSD-GK--LVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLGGS 341 (453)
Q Consensus 279 ~~~li~~l~~~GldGIEV~~~~-~~--~~~~~~~~~~~n~~~l~~~~~~~~~~lA~~~gLl~tgGS 341 (453)
..+ ++.+.+.|++|||+.... .. ..+. ..+.++++++||-+++..
T Consensus 39 l~~-l~~~~~~G~~~vEl~~~~~~~~~~~~~-----------------~~l~~~l~~~gl~i~~~~ 86 (309)
T 2hk0_A 39 GPY-IEKVAKLGFDIIEVAAHHINEYSDAEL-----------------ATIRKSAKDNGIILTAGI 86 (309)
T ss_dssp HHH-HHHHHHTTCSEEEEEHHHHTTSCHHHH-----------------HHHHHHHHHTTCEEEEEC
T ss_pred HHH-HHHHHHhCCCEEEeccCCccccchhhH-----------------HHHHHHHHHcCCeEEEec
Confidence 356 888889999999998532 11 1111 257788999999888744
No 97
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=32.30 E-value=52 Score=29.92 Aligned_cols=52 Identities=13% Similarity=0.197 Sum_probs=36.4
Q ss_pred ceeEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcCCeE
Q 012942 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKI 130 (453)
Q Consensus 72 ~~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~IAITDHdt~~g~~e~~~~a~~~gi~v 130 (453)
.+.+|+|.|. .|+..++.+.+.|.+.|.+-+-.......++.+.+++.|+.+
T Consensus 61 ~i~ld~~l~d-------~p~~~~~~~~~aGad~i~vh~~~~~~~~~~~~~~~~~~g~~~ 112 (218)
T 3jr2_A 61 ILVCDMKTTD-------GGAILSRMAFEAGADWITVSAAAHIATIAACKKVADELNGEI 112 (218)
T ss_dssp EEEEEEEECS-------CHHHHHHHHHHHTCSEEEEETTSCHHHHHHHHHHHHHHTCEE
T ss_pred cEEEEEeecc-------cHHHHHHHHHhcCCCEEEEecCCCHHHHHHHHHHHHHhCCcc
Confidence 6778998873 367789999999999998844222112456667777777654
No 98
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=32.24 E-value=44 Score=36.26 Aligned_cols=23 Identities=26% Similarity=0.141 Sum_probs=17.4
Q ss_pred CHHHHHHHHHHcCCEEE--EeCCCC
Q 012942 253 LAEVAVQLIHRTGGLAV--LAHPWA 275 (453)
Q Consensus 253 ~~eeaI~~I~~aGGvaV--LAHP~~ 275 (453)
....+.+.||+.|+.++ |.|+++
T Consensus 85 ~~~~~~~~vh~~g~~i~~Ql~h~Gr 109 (729)
T 1o94_A 85 NLKAMTDEVHKYGALAGVELWYGGA 109 (729)
T ss_dssp HHHHHHHHHHTTTCEEEEEEECCGG
T ss_pred HHHHHHHHHHhCCCeEEEEecCCCc
Confidence 35677889999999766 889644
No 99
>3nqb_A Adenine deaminase 2; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics, nysgxrc; 2.21A {Agrobacterium tumefaciens} PDB: 3t81_A 3t8l_A
Probab=32.15 E-value=16 Score=39.03 Aligned_cols=59 Identities=15% Similarity=0.249 Sum_probs=40.6
Q ss_pred ceeEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCC------CCHHHHHHHHHhcCCeEEeE
Q 012942 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTM------SGIPEAIETARRFGMKIIPG 133 (453)
Q Consensus 72 ~~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~IAITDHdt~------~g~~e~~~~a~~~gi~vI~G 133 (453)
+-++|.|+|... +..+|++..+.|...|+..+. +|.++. .++..+.+.++..++.+.+.
T Consensus 89 PG~ID~H~Hl~~--~~~~~~~~~~~al~~GvTtvv-~~p~~~~~v~g~~~~~~~l~~a~~~~~~v~~~ 153 (608)
T 3nqb_A 89 PGLIDTHMHIES--SMITPAAYAAAVVARGVTTIV-WDPHEFGNVHGVDGVRWAAKAIENLPLRAILL 153 (608)
T ss_dssp ECEEEEEECGGG--GTSCHHHHHHHHHTTTEEEEE-ECCHHHHHHHTHHHHHHHHHHHTTCSSEEEEE
T ss_pred cCeEecccCccc--ccCCHHHHHHHHHhCCeEEEE-cCCccccccCCHHHHHHHHHHhhhcCcEEEEe
Confidence 447899999864 346899999999999998875 344332 33444555566666666544
No 100
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=32.04 E-value=17 Score=33.45 Aligned_cols=15 Identities=20% Similarity=0.146 Sum_probs=8.7
Q ss_pred CCHHHHHHHHHHcCC
Q 012942 252 PLAEVAVQLIHRTGG 266 (453)
Q Consensus 252 ~~~eeaI~~I~~aGG 266 (453)
.+++++++.+.++|-
T Consensus 16 ~~~~~~l~~~~~~G~ 30 (281)
T 3u0h_A 16 TSLVLYLDLARETGY 30 (281)
T ss_dssp CCHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHcCC
Confidence 455666666666553
No 101
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=31.34 E-value=33 Score=32.26 Aligned_cols=14 Identities=14% Similarity=0.088 Sum_probs=9.0
Q ss_pred CCHHHHHHHHHHcC
Q 012942 252 PLAEVAVQLIHRTG 265 (453)
Q Consensus 252 ~~~eeaI~~I~~aG 265 (453)
.+++++++.++++|
T Consensus 36 ~~~~~~l~~a~~~G 49 (296)
T 2g0w_A 36 VSFPKRVKVAAENG 49 (296)
T ss_dssp SCHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHcC
Confidence 45666666666666
No 102
>3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A
Probab=31.04 E-value=74 Score=31.46 Aligned_cols=47 Identities=13% Similarity=0.183 Sum_probs=40.6
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcCCeEEeEEEE
Q 012942 85 DGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVEI 136 (453)
Q Consensus 85 DG~~tp~elv~~A~~~Gl~~IAITDHdt~~g~~e~~~~a~~~gi~vI~GiEi 136 (453)
|-.-+|+++++..+..|++.|=|-|=| +.+..+++..||+++.|+-.
T Consensus 12 ~nlp~p~~Vv~llks~gi~~VRlY~~D-----~~vL~Al~~sgi~V~lGV~n 58 (323)
T 3ur8_A 12 NNLPSDQDVIKLYNANNIKKMRIYYPH-----TNVFNALKGSNIEIILDVPN 58 (323)
T ss_dssp SSCCCHHHHHHHHHHTTCCEEEESSCC-----HHHHHHHTTCCCEEEEEECG
T ss_pred CCCCCHHHHHHHHHhCCCCeEEecCCC-----HHHHHHHHhcCCeEEEeccc
Confidence 445789999999999999999998766 67788888899999999865
No 103
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=30.92 E-value=44 Score=35.72 Aligned_cols=23 Identities=17% Similarity=0.312 Sum_probs=17.7
Q ss_pred CHHHHHHHHHHcCCEEE--EeCCCC
Q 012942 253 LAEVAVQLIHRTGGLAV--LAHPWA 275 (453)
Q Consensus 253 ~~eeaI~~I~~aGGvaV--LAHP~~ 275 (453)
....+.+.||+.|+.++ |.|+++
T Consensus 82 ~~~~~~~~vh~~g~~i~~Ql~h~Gr 106 (671)
T 1ps9_A 82 HHRTITEAVHQEGGKIALQILHTGR 106 (671)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCCGG
T ss_pred HHHHHHHHHHhcCCEEEEEeccCCc
Confidence 45678889999999755 888654
No 104
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=30.89 E-value=1.1e+02 Score=28.75 Aligned_cols=52 Identities=25% Similarity=0.238 Sum_probs=32.3
Q ss_pred ChHHHHHHHHHcCCcEEEEeCC-CC-ChhhhhhhhhhhhHHHHHhHHHHHHHHHHHHcCCeeee
Q 012942 278 NPAAIIRKLKDVGLHGLEVYRS-DG-KLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLG 339 (453)
Q Consensus 278 ~~~~li~~l~~~GldGIEV~~~-~~-~~~~~~~~~~~~n~~~l~~~~~~~~~~lA~~~gLl~tg 339 (453)
...+.++.+++.|++|||+... .+ ...... .+ ......+.++++++||-+++
T Consensus 16 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~----~~------~~~~~~~~~~l~~~gl~i~~ 69 (340)
T 2zds_A 16 PLEEVCRLARDFGYDGLELACWGDHFEVDKAL----AD------PSYVDSRHQLLDKYGLKCWA 69 (340)
T ss_dssp CHHHHHHHHHHHTCSEEEEESSTTTCCHHHHH----HC------TTHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHcCCCEEEeccccccCCccccc----cC------HHHHHHHHHHHHHcCCeEEE
Confidence 3467788889999999999852 22 221000 00 00112678899999998764
No 105
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=30.68 E-value=2.2e+02 Score=26.21 Aligned_cols=48 Identities=13% Similarity=0.066 Sum_probs=36.7
Q ss_pred CCHHHHHHHHHHcCCEEEEeCCCCCCChHHHHHHHHHcCCcEEEEeCCC
Q 012942 252 PLAEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSD 300 (453)
Q Consensus 252 ~~~eeaI~~I~~aGGvaVLAHP~~~~~~~~li~~l~~~GldGIEV~~~~ 300 (453)
.+..+.++.+.+.+=++|+-... .....++++.+.+.|++.||+-...
T Consensus 5 ~~~~~~~~~l~~~~ii~vir~~~-~~~~~~~~~al~~gGv~~iel~~k~ 52 (224)
T 1vhc_A 5 YTTQQIIEKLRELKIVPVIALDN-ADDILPLADTLAKNGLSVAEITFRS 52 (224)
T ss_dssp CCHHHHHHHHHHHCEEEEECCSS-GGGHHHHHHHHHHTTCCEEEEETTS
T ss_pred cchHHHHHHHHHCCeEEEEeCCC-HHHHHHHHHHHHHcCCCEEEEeccC
Confidence 46778899999999999987532 2233467888889999999998543
No 106
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=30.68 E-value=2.6e+02 Score=27.23 Aligned_cols=115 Identities=10% Similarity=0.017 Sum_probs=0.0
Q ss_pred HHhCCCCCCHHHHHHHhCCCCCCCHHHHHHHHHHcCccccHHHHHHHHhhCC--------CCccccCCCCCHHHHHHHHH
Q 012942 191 LNKLKLPLKWEHVAKIAGKGVAPGRLHVARAMVEAGHVENLKQAFARYLYDG--------GPAYSTGSEPLAEVAVQLIH 262 (453)
Q Consensus 191 L~~~Gi~i~~E~v~~~ag~~~~~gr~hia~aLv~~G~~~~~~~aF~~yl~~g--------~p~yv~~~~~~~eeaI~~I~ 262 (453)
.+..+..++.++..+ |+++|.+.|+ +++--| .|-+ -....+..|.++.+.
T Consensus 20 ~Q~~~~~~~~e~k~~------------i~~~L~~~Gv---------d~IEvG~~~g~p~ssp~~-g~~~~~~~e~l~~i~ 77 (345)
T 1nvm_A 20 SHAIRHQYTLDDVRA------------IARALDKAKV---------DSIEVAHGDGLQGSSFNY-GFGRHTDLEYIEAVA 77 (345)
T ss_dssp HHHTTTCCCHHHHHH------------HHHHHHHHTC---------SEEECSCTTSTTCCBTTT-BCCSSCHHHHHHHHH
T ss_pred cCCCCCCCCHHHHHH------------HHHHHHHcCC---------CEEEEecCCCCCCCCCcc-cCCCCCHHHHHHHHH
Q ss_pred Hc-CCEEEEeCCCCCCChHHHHHHHHHcCCcEEEEeCCCCChhhhhhhhhhhhHHHHHhHHHHHHHHHHHHcCCeeeec-
Q 012942 263 RT-GGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDGKLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLGG- 340 (453)
Q Consensus 263 ~a-GGvaVLAHP~~~~~~~~li~~l~~~GldGIEV~~~~~~~~~~~~~~~~~n~~~l~~~~~~~~~~lA~~~gLl~tgG- 340 (453)
+. .++.+.+.=..-......++...++|+|++=++.+-...+... .+.++|+++|+-+.+.
T Consensus 78 ~~~~~~~i~~l~~p~~~~~~~i~~a~~aGvd~v~I~~~~s~~~~~~-----------------~~i~~ak~~G~~v~~~~ 140 (345)
T 1nvm_A 78 GEISHAQIATLLLPGIGSVHDLKNAYQAGARVVRVATHCTEADVSK-----------------QHIEYARNLGMDTVGFL 140 (345)
T ss_dssp TTCSSSEEEEEECBTTBCHHHHHHHHHHTCCEEEEEEETTCGGGGH-----------------HHHHHHHHHTCEEEEEE
T ss_pred hhCCCCEEEEEecCCcccHHHHHHHHhCCcCEEEEEEeccHHHHHH-----------------HHHHHHHHCCCEEEEEE
Q ss_pred cCCC
Q 012942 341 SDYH 344 (453)
Q Consensus 341 SDfH 344 (453)
+|.+
T Consensus 141 ~~a~ 144 (345)
T 1nvm_A 141 MMSH 144 (345)
T ss_dssp ESTT
T ss_pred EeCC
No 107
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=30.51 E-value=1.1e+02 Score=27.80 Aligned_cols=45 Identities=13% Similarity=0.114 Sum_probs=35.2
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEecCC------CCCCHHHHHHHHHhcCCeE
Q 012942 86 GYLSPSKLVERAHCNGVKVLALTDHD------TMSGIPEAIETARRFGMKI 130 (453)
Q Consensus 86 G~~tp~elv~~A~~~Gl~~IAITDHd------t~~g~~e~~~~a~~~gi~v 130 (453)
...++++.++.+++.|++.|-+.... .-....++.+.+++.||.+
T Consensus 17 ~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~~ 67 (272)
T 2q02_A 17 PGLSIEAFFRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEI 67 (272)
T ss_dssp TTSCHHHHHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEE
T ss_pred CCCCHHHHHHHHHHcCCCEEEeeccccccccccccCHHHHHHHHHHcCCeE
Confidence 35789999999999999999997421 1245677888888888865
No 108
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=30.43 E-value=1e+02 Score=27.96 Aligned_cols=45 Identities=9% Similarity=0.039 Sum_probs=35.6
Q ss_pred CCCHHHHHHHHHHcCCcEEEEe-cCC-----CCCCHHHHHHHHHhcCCeEE
Q 012942 87 YLSPSKLVERAHCNGVKVLALT-DHD-----TMSGIPEAIETARRFGMKII 131 (453)
Q Consensus 87 ~~tp~elv~~A~~~Gl~~IAIT-DHd-----t~~g~~e~~~~a~~~gi~vI 131 (453)
..++++.++.+++.|++.|-+. -.+ +-....++.+.+++.|+.+.
T Consensus 13 ~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~ 63 (278)
T 1i60_A 13 NSNLKLDLELCEKHGYDYIEIRTMDKLPEYLKDHSLDDLAEYFQTHHIKPL 63 (278)
T ss_dssp TCCHHHHHHHHHHTTCSEEEEETTTHHHHHTTSSCHHHHHHHHHTSSCEEE
T ss_pred CCCHHHHHHHHHHhCCCEEEEccHHHHHHHhccCCHHHHHHHHHHcCCCee
Confidence 3789999999999999999998 432 22456778888888888764
No 109
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=30.22 E-value=1.8e+02 Score=32.13 Aligned_cols=82 Identities=12% Similarity=0.071 Sum_probs=53.9
Q ss_pred CCCCHHHHHHHHHHcCCEEEEeCCCCC-----C-ChHHHHHHHHHcCCcEEEEeCC-----CCC----hhhhhhhhhhhh
Q 012942 250 SEPLAEVAVQLIHRTGGLAVLAHPWAL-----K-NPAAIIRKLKDVGLHGLEVYRS-----DGK----LVDVNFLEKIDN 314 (453)
Q Consensus 250 ~~~~~eeaI~~I~~aGGvaVLAHP~~~-----~-~~~~li~~l~~~GldGIEV~~~-----~~~----~~~~~~~~~~~n 314 (453)
...+++|+++..++-|=-+++=|-+.- . +.++.++.+.+.|+.||=+=.= ..+ +.-+++
T Consensus 416 pd~Dl~eL~~YA~sKGV~iilw~~t~~~~~n~e~~~d~~f~~~~~~Gv~GVKvdF~g~~~~r~~~h~~Q~~v~~------ 489 (738)
T 2d73_A 416 PDFDVKEIHRYAARKGIKMMMHHETSASVRNYERHMDKAYQFMADNGYNSVKSGYVGNIIPRGEHHYGQWMNNH------ 489 (738)
T ss_dssp TTCCHHHHHHHHHHTTCEEEEEEECTTBHHHHHHHHHHHHHHHHHTTCCEEEEECCSSCBSTTCCTTSHHHHHH------
T ss_pred CCCCHHHHHHHHHhCCCEEEEEEcCCCchhhHHHHHHHHHHHHHHcCCCEEEeCccccCcCCcccccchHHHHH------
Confidence 346799999999998744444444432 1 1245677788999999999543 221 222221
Q ss_pred HHHHHhHHHHHHHHHHHHcCCeeeeccCCCCCCCC
Q 012942 315 FLLLLCLRQITYTDLADTYGLLKLGGSDYHGRGGH 349 (453)
Q Consensus 315 ~~~l~~~~~~~~~~lA~~~gLl~tgGSDfHg~~~~ 349 (453)
...+.+-|.+|+|++ ||||+.+|
T Consensus 490 --------Y~~i~~~AA~~~LmV----nfHg~~kP 512 (738)
T 2d73_A 490 --------YLYAVKKAADYKIMV----NAHEATRP 512 (738)
T ss_dssp --------HHHHHHHHHHTTCEE----EETTSCCC
T ss_pred --------HHHHHHHHHHcCcEE----EccCCcCC
Confidence 115667799999998 79998653
No 110
>2ood_A BLR3880 protein; PSI-II, PSI-2, guanine deaminase, guanine, structural genomics, protein structure initiative; HET: GUN; 2.62A {Bradyrhizobium japonicum} SCOP: b.92.1.4 c.1.9.9
Probab=29.89 E-value=54 Score=33.08 Aligned_cols=63 Identities=19% Similarity=0.177 Sum_probs=38.8
Q ss_pred ceeEceeeeCcCC-----CCC-----------------CCHHHH-------HHHHHHcCCcEEEEecCCCCC--CHHHHH
Q 012942 72 NVVFELHSHSNFS-----DGY-----------------LSPSKL-------VERAHCNGVKVLALTDHDTMS--GIPEAI 120 (453)
Q Consensus 72 ~~~~DLH~HT~~S-----DG~-----------------~tp~el-------v~~A~~~Gl~~IAITDHdt~~--g~~e~~ 120 (453)
+=+||.|+|...+ .|. .+++++ +..+.+.|+..+.- +.+.. .+..+.
T Consensus 73 PG~ID~H~Hl~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~~--~~~~~~~~~~~~~ 150 (475)
T 2ood_A 73 PGFIDGHIHLPQTRVLGAYGEQLLPWLQKSIYPEEIKYKDRNYAREGVKRFLDALLAAGTTTCQA--FTSSSPVATEELF 150 (475)
T ss_dssp ECEEEEEEEGGGTTCTTCCSCCHHHHHHHHTHHHHGGGGSHHHHHHHHHHHHHHHHHTTEEEEEE--ECCSSHHHHHHHH
T ss_pred cceecCcccHHhHhhcCCCCCCHHHHHHHhccchhhccCCHHHHHHHHHHHHHHHHhcCceEEEE--ecccCchhHHHHH
Confidence 4588999997533 111 145655 67888999888764 32221 234455
Q ss_pred HHHHhcCCeEEeEEEE
Q 012942 121 ETARRFGMKIIPGVEI 136 (453)
Q Consensus 121 ~~a~~~gi~vI~GiEi 136 (453)
+.+++.|++++.|..+
T Consensus 151 ~~~~~~g~r~~~g~~~ 166 (475)
T 2ood_A 151 EEASRRNMRVIAGLTG 166 (475)
T ss_dssp HHHHHHTCCEEECCEE
T ss_pred HHHHHcCCeEEEEeee
Confidence 6667778887766543
No 111
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=29.79 E-value=1.1e+02 Score=29.66 Aligned_cols=82 Identities=12% Similarity=0.149 Sum_probs=53.6
Q ss_pred cCCEEEEeCCCCCCCh--HHHHHHHHHcCCcEEEEeCCCC----ChhhhhhhhhhhhHHHHHhHHHHHHHHHHHHcCCee
Q 012942 264 TGGLAVLAHPWALKNP--AAIIRKLKDVGLHGLEVYRSDG----KLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLK 337 (453)
Q Consensus 264 aGGvaVLAHP~~~~~~--~~li~~l~~~GldGIEV~~~~~----~~~~~~~~~~~~n~~~l~~~~~~~~~~lA~~~gLl~ 337 (453)
.|.++|+|+-+..... .++.+...+.|.||+=+..|++ .+.+.. + ...|.++|+.-++++
T Consensus 75 ~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~Pyy~~~~~~s~~~----l----------~~~f~~va~a~~lPi 140 (309)
T 3fkr_A 75 AGRVPVIVTTSHYSTQVCAARSLRAQQLGAAMVMAMPPYHGATFRVPEAQ----I----------FEFYARVSDAIAIPI 140 (309)
T ss_dssp TTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEECCSCBTTTBCCCHHH----H----------HHHHHHHHHHCSSCE
T ss_pred CCCCcEEEecCCchHHHHHHHHHHHHHcCCCEEEEcCCCCccCCCCCHHH----H----------HHHHHHHHHhcCCCE
Confidence 4679999998764322 2455666788999999998875 333322 1 127888999888876
Q ss_pred eeccCCCCCCCCCCcccCCccCChhHHHHHhc
Q 012942 338 LGGSDYHGRGGHGESELGSVKLPVLVLNDFLK 369 (453)
Q Consensus 338 tgGSDfHg~~~~~~~~lG~~~~p~~~~~~~~~ 369 (453)
.- ||-| . -.+.++.+++.+|.+
T Consensus 141 il---Yn~P-----~--tg~~l~~~~~~~La~ 162 (309)
T 3fkr_A 141 MV---QDAP-----A--SGTALSAPFLARMAR 162 (309)
T ss_dssp EE---EECG-----G--GCCCCCHHHHHHHHH
T ss_pred EE---EeCC-----C--CCCCCCHHHHHHHHh
Confidence 64 4433 1 235677777777764
No 112
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=29.68 E-value=43 Score=31.80 Aligned_cols=45 Identities=31% Similarity=0.454 Sum_probs=31.3
Q ss_pred hHHHHHHHHHcCCcEEEEeCCC-C--ChhhhhhhhhhhhHHHHHhHHHHHHHHHHHHcCCeeeec
Q 012942 279 PAAIIRKLKDVGLHGLEVYRSD-G--KLVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLGG 340 (453)
Q Consensus 279 ~~~li~~l~~~GldGIEV~~~~-~--~~~~~~~~~~~~n~~~l~~~~~~~~~~lA~~~gLl~tgG 340 (453)
..+.++.++++|++|||++... + ...+. ..+.++++++||-+++.
T Consensus 31 ~~~~l~~~a~~G~~~VEl~~~~~~~~~~~~~-----------------~~~~~~l~~~GL~v~~~ 78 (303)
T 3l23_A 31 VAANLRKVKDMGYSKLELAGYGKGAIGGVPM-----------------MDFKKMAEDAGLKIISS 78 (303)
T ss_dssp HHHHHHHHHHTTCCEEEECCEETTEETTEEH-----------------HHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHcCCCEEEeccccCcccCCCCH-----------------HHHHHHHHHcCCeEEEE
Confidence 4578888899999999997521 1 11111 15778899999988653
No 113
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=29.67 E-value=77 Score=28.09 Aligned_cols=41 Identities=22% Similarity=0.344 Sum_probs=31.3
Q ss_pred CCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcCCeEEeEE
Q 012942 88 LSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGV 134 (453)
Q Consensus 88 ~tp~elv~~A~~~Gl~~IAITDHdt~~g~~e~~~~a~~~gi~vI~Gi 134 (453)
.++++ ++.|.+.|.++| +..... .++.+.+++.|+.++||+
T Consensus 71 ~~~~~-~~~a~~~Gad~i-v~~~~~----~~~~~~~~~~g~~vi~g~ 111 (205)
T 1wa3_A 71 TSVEQ-CRKAVESGAEFI-VSPHLD----EEISQFCKEKGVFYMPGV 111 (205)
T ss_dssp CSHHH-HHHHHHHTCSEE-ECSSCC----HHHHHHHHHHTCEEECEE
T ss_pred CCHHH-HHHHHHcCCCEE-EcCCCC----HHHHHHHHHcCCcEECCc
Confidence 36765 588889999999 664322 567788888999999965
No 114
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=29.62 E-value=26 Score=31.56 Aligned_cols=28 Identities=18% Similarity=-0.105 Sum_probs=22.9
Q ss_pred CCCCC-HHHHHHHHHHcCCcEEEEec-CCC
Q 012942 85 DGYLS-PSKLVERAHCNGVKVLALTD-HDT 112 (453)
Q Consensus 85 DG~~t-p~elv~~A~~~Gl~~IAITD-Hdt 112 (453)
.|... |-+++..|+++|+++||||- ..+
T Consensus 87 Sg~n~~~ie~A~~ake~G~~vIaITs~~~~ 116 (170)
T 3jx9_A 87 DTERSDLLASLARYDAWHTPYSIITLGDVT 116 (170)
T ss_dssp CSCCHHHHHHHHHHHHHTCCEEEEESSCCC
T ss_pred CCCCHHHHHHHHHHHHCCCcEEEEeCcchh
Confidence 45444 78999999999999999998 444
No 115
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=29.09 E-value=2.2e+02 Score=26.65 Aligned_cols=46 Identities=15% Similarity=0.109 Sum_probs=35.2
Q ss_pred HHHHHHHHHHcCCEEEEeCCCCCCChHHHHHHHHHcCCcEEEEeCCC
Q 012942 254 AEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSD 300 (453)
Q Consensus 254 ~eeaI~~I~~aGGvaVLAHP~~~~~~~~li~~l~~~GldGIEV~~~~ 300 (453)
..++.+.+.+.|=++|+-.... .....+.+.+.+.|+..||+-...
T Consensus 24 m~~~~~~l~~~~vv~Vir~~~~-~~a~~~a~al~~gGi~~iEvt~~t 69 (232)
T 4e38_A 24 MSTINNQLKALKVIPVIAIDNA-EDIIPLGKVLAENGLPAAEITFRS 69 (232)
T ss_dssp HHHHHHHHHHHCEEEEECCSSG-GGHHHHHHHHHHTTCCEEEEETTS
T ss_pred HHHHHHHHHhCCEEEEEEcCCH-HHHHHHHHHHHHCCCCEEEEeCCC
Confidence 5678899999999999976532 223467778889999999996543
No 116
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=28.49 E-value=1.9e+02 Score=27.91 Aligned_cols=95 Identities=15% Similarity=0.100 Sum_probs=56.1
Q ss_pred CCHHH---HHHHHHH--cCCEEEEeCCCCCCCh--HHHHHHHHHcCCcEEEEeCCCCCh---hhhhhhhhhhhHHHHHhH
Q 012942 252 PLAEV---AVQLIHR--TGGLAVLAHPWALKNP--AAIIRKLKDVGLHGLEVYRSDGKL---VDVNFLEKIDNFLLLLCL 321 (453)
Q Consensus 252 ~~~ee---aI~~I~~--aGGvaVLAHP~~~~~~--~~li~~l~~~GldGIEV~~~~~~~---~~~~~~~~~~n~~~l~~~ 321 (453)
++.+| +++.+.+ .|.++|+||-+..... .++.+...+.|.||+=+..|++.. .+.. +
T Consensus 64 Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~~s~~~----l--------- 130 (307)
T 3s5o_A 64 LTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVTPCYYRGRMSSAA----L--------- 130 (307)
T ss_dssp SCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCTTGGGCCHHH----H---------
T ss_pred CCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCcCCCCCCHHH----H---------
Confidence 45554 4444444 3779999988754322 245556678899999998886542 2221 1
Q ss_pred HHHHHHHHHHHcCCeeeeccCCCCCCCCCCcccCCccCChhHHHHHhc
Q 012942 322 RQITYTDLADTYGLLKLGGSDYHGRGGHGESELGSVKLPVLVLNDFLK 369 (453)
Q Consensus 322 ~~~~~~~lA~~~gLl~tgGSDfHg~~~~~~~~lG~~~~p~~~~~~~~~ 369 (453)
...|.++|+.-++++.- ||-|. .- .+.++.+++.+|.+
T Consensus 131 -~~~f~~ia~a~~lPiil---Yn~P~-----~t-g~~l~~~~~~~La~ 168 (307)
T 3s5o_A 131 -IHHYTKVADLSPIPVVL---YSVPA-----NT-GLDLPVDAVVTLSQ 168 (307)
T ss_dssp -HHHHHHHHHHCSSCEEE---EECHH-----HH-SCCCCHHHHHHHHT
T ss_pred -HHHHHHHHhhcCCCEEE---EeCCc-----cc-CCCCCHHHHHHHhc
Confidence 12677888887776653 33321 11 24566677776654
No 117
>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus} SCOP: c.1.15.3 PDB: 1bxc_A
Probab=28.12 E-value=74 Score=31.48 Aligned_cols=48 Identities=19% Similarity=0.306 Sum_probs=31.0
Q ss_pred ChHHHHHHHHHcCCcEEEEe----CCCCCh-hhhhhhhhhhhHHHHHhHHHHHHHHHHHHcCCeee
Q 012942 278 NPAAIIRKLKDVGLHGLEVY----RSDGKL-VDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKL 338 (453)
Q Consensus 278 ~~~~li~~l~~~GldGIEV~----~~~~~~-~~~~~~~~~~n~~~l~~~~~~~~~~lA~~~gLl~t 338 (453)
...+.++.+.+.|++|||+. .+.... .+.. .....+.++++++||-++
T Consensus 34 ~~~e~l~~aa~~G~~~vEl~~~~~~p~~~~~~e~~-------------~~~~~l~~~l~~~GL~i~ 86 (387)
T 1bxb_A 34 DPVYVVHKLAELGAYGVNLHDEDLIPRGTPPQERD-------------QIVRRFKKALDETGLKVP 86 (387)
T ss_dssp CHHHHHHHHHHHTCSEEEEEHHHHSCTTCCTTHHH-------------HHHHHHHHHHHHHTCBCC
T ss_pred CHHHHHHHHHHhCCCEEEecCcccCCCCCChhhhH-------------HHHHHHHHHHHHhCCEEE
Confidence 34567778888999999998 554321 0000 011267889999999775
No 118
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=27.56 E-value=88 Score=31.87 Aligned_cols=55 Identities=15% Similarity=0.334 Sum_probs=35.9
Q ss_pred HhhCCCCccccCCCCCHHHHHHHHHHc------CCEEEEeCCCCCCChHHHHHHHHHcCCcEEEE
Q 012942 238 YLYDGGPAYSTGSEPLAEVAVQLIHRT------GGLAVLAHPWALKNPAAIIRKLKDVGLHGLEV 296 (453)
Q Consensus 238 yl~~g~p~yv~~~~~~~eeaI~~I~~a------GGvaVLAHP~~~~~~~~li~~l~~~GldGIEV 296 (453)
||+.|.|.+.+. ..+.+.++.|++. -.+.+-++|... ..+.++.|++.|++-|++
T Consensus 109 ~fgGGtpt~l~~--~~l~~ll~~i~~~~~~~~~~eitie~~p~~l--~~e~l~~L~~~G~~risl 169 (457)
T 1olt_A 109 HWGGGTPTYLNK--AQISRLMKLLRENFQFNADAEISIEVDPREI--ELDVLDHLRAEGFNRLSM 169 (457)
T ss_dssp EEEESCGGGSCH--HHHHHHHHHHHHHSCEEEEEEEEEEECSSSC--CTHHHHHHHHTTCCEEEE
T ss_pred EEeCCCcccCCH--HHHHHHHHHHHHhCCCCCCcEEEEEEccCcC--CHHHHHHHHHcCCCEEEE
Confidence 455555554431 1356777777762 257788888754 346788888999887766
No 119
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=26.12 E-value=1.8e+02 Score=26.64 Aligned_cols=63 Identities=19% Similarity=0.104 Sum_probs=43.4
Q ss_pred CCCCHHHHHHHHHHcCCEEEEeCCCCC---CChHHHHHHHHHc-CCcEEEEeCCCCChhhhhhhhhhhhHHHHHhHHHHH
Q 012942 250 SEPLAEVAVQLIHRTGGLAVLAHPWAL---KNPAAIIRKLKDV-GLHGLEVYRSDGKLVDVNFLEKIDNFLLLLCLRQIT 325 (453)
Q Consensus 250 ~~~~~eeaI~~I~~aGGvaVLAHP~~~---~~~~~li~~l~~~-GldGIEV~~~~~~~~~~~~~~~~~n~~~l~~~~~~~ 325 (453)
+-.+++++++.++++|=.+++ ||... .....-+..|+.. +.|||=--++ .
T Consensus 39 ~i~~l~~~v~~lk~~~K~v~V-h~Dli~Gls~d~~ai~fL~~~~~pdGIIsTk~-------------------------~ 92 (192)
T 3kts_A 39 HVAQLKALVKYAQAGGKKVLL-HADLVNGLKNDDYAIDFLCTEICPDGIISTRG-------------------------N 92 (192)
T ss_dssp ETTTHHHHHHHHHHTTCEEEE-EGGGEETCCCSHHHHHHHHHTTCCSEEEESCH-------------------------H
T ss_pred cHHHHHHHHHHHHHcCCeEEE-ecCchhccCCcHHHHHHHHhCCCCCEEEeCcH-------------------------H
Confidence 346799999999999998888 99643 3444556666653 7888633221 3
Q ss_pred HHHHHHHcCCeee
Q 012942 326 YTDLADTYGLLKL 338 (453)
Q Consensus 326 ~~~lA~~~gLl~t 338 (453)
....|++.||...
T Consensus 93 ~i~~Ak~~gL~tI 105 (192)
T 3kts_A 93 AIMKAKQHKMLAI 105 (192)
T ss_dssp HHHHHHHTTCEEE
T ss_pred HHHHHHHCCCeEE
Confidence 5567888887653
No 120
>3mpg_A Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus anthracis}
Probab=26.01 E-value=1.3e+02 Score=29.53 Aligned_cols=56 Identities=7% Similarity=0.006 Sum_probs=37.1
Q ss_pred ceeEceeeeCcCC--CCCCCHHHHHHHHHHcCCcEEEEecCCCCC-----CHHHHHHHHHhcC
Q 012942 72 NVVFELHSHSNFS--DGYLSPSKLVERAHCNGVKVLALTDHDTMS-----GIPEAIETARRFG 127 (453)
Q Consensus 72 ~~~~DLH~HT~~S--DG~~tp~elv~~A~~~Gl~~IAITDHdt~~-----g~~e~~~~a~~~g 127 (453)
+-++|+|+|...+ ....+.....+.|.+.|+..+..+-+.... .+....+.++..+
T Consensus 53 PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (428)
T 3mpg_A 53 PGLVDVHVHLREPGGEHKETIETGTLAAAKGGFTTICAMPNTRPVPDCREHMEDLQNRIKEKA 115 (428)
T ss_dssp ECEEEEEECCCTTTCTTTCCHHHHHHHHHHHTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHC
T ss_pred eCEEEEeeccCCCCCCchhHHHHHHHHHHhCCeEEEEeCCCCCCCCCcHHHHHHHHHHhcccC
Confidence 4488999998654 234567788999999999998876543211 2344445555545
No 121
>2wvv_A Alpha-L-fucosidase; alpha-L-fucose, hydrolase, glycoside hydrolase family 29; 1.73A {Bacteroides thetaiotaomicron} PDB: 2xii_A* 2xib_A* 2wvv_B 2wvt_A* 2wvu_A* 2wvs_A*
Probab=25.92 E-value=65 Score=33.18 Aligned_cols=52 Identities=15% Similarity=0.147 Sum_probs=39.1
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEe---------------cCCCCC------CHHHHHHHHHhcCCeEEeEEEEEe
Q 012942 85 DGYLSPSKLVERAHCNGVKVLALT---------------DHDTMS------GIPEAIETARRFGMKIIPGVEIST 138 (453)
Q Consensus 85 DG~~tp~elv~~A~~~Gl~~IAIT---------------DHdt~~------g~~e~~~~a~~~gi~vI~GiEis~ 138 (453)
--.+.|++.++.|++.|++.+.+| ||+.+. =+.++.++|++.||++ |+=+|.
T Consensus 75 p~~fDp~~Wa~~~k~AGakyvvlTaKHHDGF~lwpSk~t~~n~~~~~~krDlv~el~~A~rk~Glk~--GlY~S~ 147 (450)
T 2wvv_A 75 PTKFDAKKWAKMAKEMGTKYVKITTKHHEGFCLWPSKYTKYTVANTPYKRDILGELVKAYNDEGIDV--HFYFSV 147 (450)
T ss_dssp CTTCCHHHHHHHHHHHTCSEEEEEEECTTCCBSSCCTTCSCBGGGSTTCSCHHHHHHHHHHHTTCEE--EEEEES
T ss_pred cccCCHHHHHHHHHHcCCcEEEEEEeecCCccccCCCCCCCccccCCCCCChHHHHHHHHHHcCCeE--EEEecH
Confidence 456899999999999999999987 443331 1467888999999776 455554
No 122
>1xim_A D-xylose isomerase; isomerase(intramolecular oxidoreductse); HET: XYL; 2.20A {Actinoplanes missouriensis} SCOP: c.1.15.3 PDB: 4xim_A 5xim_A* 6xim_A* 7xim_A 8xim_A* 9xim_A* 3xin_A 2xim_A* 5xin_A* 1xin_A* 1bhw_A* 2xin_A* 3xim_A*
Probab=25.63 E-value=70 Score=31.71 Aligned_cols=51 Identities=18% Similarity=0.218 Sum_probs=31.8
Q ss_pred hHHHHHHHHHcCCcEEEEe----CCCCCh-hhhhhhhhhhhHHHHHhHHHHHHHHHHHHcCCeee-eccC
Q 012942 279 PAAIIRKLKDVGLHGLEVY----RSDGKL-VDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKL-GGSD 342 (453)
Q Consensus 279 ~~~li~~l~~~GldGIEV~----~~~~~~-~~~~~~~~~~n~~~l~~~~~~~~~~lA~~~gLl~t-gGSD 342 (453)
..+.++.+.+.|++|||+. .+.... .+.. .....+.++++++||-++ ..+.
T Consensus 35 ~~e~l~~aa~~G~~~VEl~~~~l~p~~~~~~~~~-------------~~~~~l~~~l~~~GL~i~~~~~~ 91 (393)
T 1xim_A 35 PVEAVHKLAEIGAYGITFHDDDLVPFGSDAQTRD-------------GIIAGFKKALDETGLIVPMVTTN 91 (393)
T ss_dssp HHHHHHHHHHHTCSEEECBHHHHSCTTCCHHHHH-------------HHHHHHHHHHHHHTCBCCEEECC
T ss_pred HHHHHHHHHHhCCCEEEeecccCCCccccccccH-------------HHHHHHHHHHHHhCCEEEEEecC
Confidence 4567777888899999997 554321 0000 011267788999999774 4443
No 123
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=25.48 E-value=1.6e+02 Score=31.92 Aligned_cols=81 Identities=19% Similarity=0.247 Sum_probs=53.8
Q ss_pred CCCHHHHHHHHHHcCCEEEEeCCC-CC-CChHHHHHHHHHcCCcEEEEeCCCC-ChhhhhhhhhhhhHHHHHhHHHHHHH
Q 012942 251 EPLAEVAVQLIHRTGGLAVLAHPW-AL-KNPAAIIRKLKDVGLHGLEVYRSDG-KLVDVNFLEKIDNFLLLLCLRQITYT 327 (453)
Q Consensus 251 ~~~~eeaI~~I~~aGGvaVLAHP~-~~-~~~~~li~~l~~~GldGIEV~~~~~-~~~~~~~~~~~~n~~~l~~~~~~~~~ 327 (453)
...++++++.+|+-|=-.++=|-. .+ ...++.++.+.+.|++||=+=.-.. +..-+++ ...+.
T Consensus 346 ~~di~~l~~Ya~~kgV~i~lw~~~~~~~~~~~~~~~~~~~~Gv~gvK~Df~~~~~Q~~v~~--------------y~~i~ 411 (641)
T 3a24_A 346 EIDLKELVDYAASKNVGIILWAGYHAFERDMENVCRHYAEMGVKGFKVDFMDRDDQEMTAF--------------NYRAA 411 (641)
T ss_dssp TCCHHHHHHHHHHTTCEEEEEEEHHHHHTSHHHHHHHHHHHTCCEEEEECCCCCSHHHHHH--------------HHHHH
T ss_pred cCCHHHHHHHHHhcCCEEEEEeeCcchHHHHHHHHHHHHHcCCCEEEECCCCCCcHHHHHH--------------HHHHH
Confidence 467999999999988444443332 22 2345678888999999999965433 3332221 11456
Q ss_pred HHHHHcCCeeeeccCCCCCCCC
Q 012942 328 DLADTYGLLKLGGSDYHGRGGH 349 (453)
Q Consensus 328 ~lA~~~gLl~tgGSDfHg~~~~ 349 (453)
+-|.+|+|+ =||||+.++
T Consensus 412 ~~aA~~~l~----V~fHg~~~P 429 (641)
T 3a24_A 412 EMCAKYKLI----LDLHGTHKP 429 (641)
T ss_dssp HHHHHTTCE----EEECSCCCC
T ss_pred HHHHHcCCE----EEcCCCcCC
Confidence 778899988 489998653
No 124
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=25.43 E-value=1.4e+02 Score=28.05 Aligned_cols=44 Identities=20% Similarity=0.206 Sum_probs=33.6
Q ss_pred CCCHHHHHHHHHHcCCcEEEEecC-CCC---------CCHHHHHHHHHhcCCeE
Q 012942 87 YLSPSKLVERAHCNGVKVLALTDH-DTM---------SGIPEAIETARRFGMKI 130 (453)
Q Consensus 87 ~~tp~elv~~A~~~Gl~~IAITDH-dt~---------~g~~e~~~~a~~~gi~v 130 (453)
..++++.++.+++.|++.|-|.-. ..+ ....++.+.+++.||.+
T Consensus 14 ~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i 67 (340)
T 2zds_A 14 DLPLEEVCRLARDFGYDGLELACWGDHFEVDKALADPSYVDSRHQLLDKYGLKC 67 (340)
T ss_dssp TSCHHHHHHHHHHHTCSEEEEESSTTTCCHHHHHHCTTHHHHHHHHHHHTTCEE
T ss_pred CCCHHHHHHHHHHcCCCEEEeccccccCCccccccCHHHHHHHHHHHHHcCCeE
Confidence 578999999999999999999853 112 12456777888888876
No 125
>3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glyco hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} SCOP: c.1.8.3 PDB: 3f55_A*
Probab=25.34 E-value=95 Score=30.62 Aligned_cols=46 Identities=15% Similarity=0.268 Sum_probs=39.5
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcCCeEEeEEE
Q 012942 85 DGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVE 135 (453)
Q Consensus 85 DG~~tp~elv~~A~~~Gl~~IAITDHdt~~g~~e~~~~a~~~gi~vI~GiE 135 (453)
|-.-+|.++++..+..|++.|=|-|-| ..+..+++..||+++.|+-
T Consensus 11 ~nlp~p~~vv~llks~gi~~VRlYdaD-----~~vL~Al~~sgi~v~vGV~ 56 (316)
T 3em5_A 11 NNLPPVSEVIALYKKSNITRMRIYDPN-----QAVLEALRGSNIELILGVP 56 (316)
T ss_dssp TTCCCHHHHHHHHHHTTCCEEECSSCC-----HHHHHHHTTCCCEEEEEEC
T ss_pred CCCCCHHHHHHHHHHcCCCEEEEecCC-----HHHHHHhhcCCceEEEecc
Confidence 455789999999999999999998865 4677888889999999985
No 126
>4do7_A Amidohydrolase 2; enzyme function initiative, EFI, structural TIM-barrel fold, putative lactonase; 1.70A {Burkholderia multivorans} PDB: 4dlm_A 4dnm_A* 4dlf_A
Probab=25.33 E-value=65 Score=30.55 Aligned_cols=56 Identities=13% Similarity=0.007 Sum_probs=37.4
Q ss_pred ceeEceeeeCcC------C---------CCCCCHHHHHHHHHHcCCcEEEEecCCCCC-CHHHHHHHHHhcC
Q 012942 72 NVVFELHSHSNF------S---------DGYLSPSKLVERAHCNGVKVLALTDHDTMS-GIPEAIETARRFG 127 (453)
Q Consensus 72 ~~~~DLH~HT~~------S---------DG~~tp~elv~~A~~~Gl~~IAITDHdt~~-g~~e~~~~a~~~g 127 (453)
+|.+|-|+|-.- . ....+++++++.+.+.|++...+.-=+... ....+.+.++..+
T Consensus 3 ~m~iD~H~H~~~~~~~~~pw~~~~~~~~~~~~~~~~ll~~~~~~GV~~~V~v~~~~~~~~n~~l~~la~~~p 74 (303)
T 4do7_A 3 ALRIDSHQHFWRYRAADYPWIGAGMGVLARDYLPDALHPLMHAQALGASIAVQARAGRDETAFLLELACDEA 74 (303)
T ss_dssp CCCEEEEECCBCCCGGGCTTCCTTCGGGSSCBCHHHHHHHHHHTTCCEEEEECCSSSHHHHHHHHHHHTTCT
T ss_pred CcEEeCCEecccCCCCCCCCCCCccccccCCCCHHHHHHHHHhcCCcEEEEEccCCcHHHHHHHHHHHHhCC
Confidence 578999999742 1 135799999999999999987776543211 1334455555443
No 127
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=24.42 E-value=74 Score=29.55 Aligned_cols=46 Identities=9% Similarity=0.043 Sum_probs=34.4
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEecCCC----------CCCHHHHHHHHHhcCCeEE
Q 012942 86 GYLSPSKLVERAHCNGVKVLALTDHDT----------MSGIPEAIETARRFGMKII 131 (453)
Q Consensus 86 G~~tp~elv~~A~~~Gl~~IAITDHdt----------~~g~~e~~~~a~~~gi~vI 131 (453)
+..++++.++.+++.|++.|-+.-... .....++.+.+++.||.+.
T Consensus 28 ~~~~~~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~ 83 (295)
T 3cqj_A 28 AGECWLERLQLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVETGVRVP 83 (295)
T ss_dssp CCSCHHHHHHHHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHHCCEEE
T ss_pred CCCCHHHHHHHHHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHHcCCeEE
Confidence 457999999999999999999975432 1124456777788888753
No 128
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=24.15 E-value=1.9e+02 Score=26.95 Aligned_cols=55 Identities=15% Similarity=0.117 Sum_probs=37.4
Q ss_pred ceeEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCC---------CCCHHHHHHHHHhcCCe
Q 012942 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDT---------MSGIPEAIETARRFGMK 129 (453)
Q Consensus 72 ~~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~IAITDHdt---------~~g~~e~~~~a~~~gi~ 129 (453)
||++ =+|+.... ..++++.++.|++.|++.|-|...+. -....++.+.+++.|+.
T Consensus 5 mmkl--G~~~~~~~-~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 68 (303)
T 3aal_A 5 MLKI--GSHVSMSG-KKMLLAASEEAASYGANTFMIYTGAPQNTKRKSIEELNIEAGRQHMQAHGIE 68 (303)
T ss_dssp -CCE--EEECCCCT-TTTHHHHHHHHHHTTCSEEEEESSCTTCCCCCCSGGGCHHHHHHHHHHTTCC
T ss_pred ceee--ceeeecCC-CccHHHHHHHHHHcCCCEEEEcCCCCCccCCCCCCHHHHHHHHHHHHHcCCc
Confidence 4444 45554432 24899999999999999999943221 12456778888889984
No 129
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=23.78 E-value=77 Score=29.84 Aligned_cols=44 Identities=18% Similarity=0.352 Sum_probs=33.6
Q ss_pred CCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcCCeEEeEEE
Q 012942 87 YLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVE 135 (453)
Q Consensus 87 ~~tp~elv~~A~~~Gl~~IAITDHdt~~g~~e~~~~a~~~gi~vI~GiE 135 (453)
+..-.+.++.|.+.|.++|. +.+ -..+..++|++.|+.++||+-
T Consensus 92 TVlt~~~a~~Ai~AGA~fIv-sP~----~~~~vi~~~~~~gi~~ipGv~ 135 (232)
T 4e38_A 92 TILNGEQALAAKEAGATFVV-SPG----FNPNTVRACQEIGIDIVPGVN 135 (232)
T ss_dssp CCCSHHHHHHHHHHTCSEEE-CSS----CCHHHHHHHHHHTCEEECEEC
T ss_pred CcCCHHHHHHHHHcCCCEEE-eCC----CCHHHHHHHHHcCCCEEcCCC
Confidence 33337789999999999995 443 236677888899999999953
No 130
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=23.53 E-value=95 Score=29.58 Aligned_cols=79 Identities=14% Similarity=0.159 Sum_probs=0.0
Q ss_pred ccHHHHHHHHhhCCCCccccCCCCCHHHHHHHHHHcCC-----EEEEeCCCCCCChHHHHHHHHHcCCcEEEEeCCCCCh
Q 012942 229 ENLKQAFARYLYDGGPAYSTGSEPLAEVAVQLIHRTGG-----LAVLAHPWALKNPAAIIRKLKDVGLHGLEVYRSDGKL 303 (453)
Q Consensus 229 ~~~~~aF~~yl~~g~p~yv~~~~~~~eeaI~~I~~aGG-----vaVLAHP~~~~~~~~li~~l~~~GldGIEV~~~~~~~ 303 (453)
..++.|-.+-|..| .+++++++++++.-. +.....|....-.+.++++++++|+|| +.=|+-+.
T Consensus 59 pvIq~a~~rAL~~g---------~~~~~~~~~~~~~r~~~Pivlm~Y~N~i~~~G~e~F~~~~~~aGvdG--~IipDLP~ 127 (252)
T 3tha_A 59 EIIADAAKIALDQG---------VDIHSVFELLARIKTKKALVFMVYYNLIFSYGLEKFVKKAKSLGICA--LIVPELSF 127 (252)
T ss_dssp CHHHHHHHHHHHTT---------CCHHHHHHHHHHCCCSSEEEEECCHHHHHHHCHHHHHHHHHHTTEEE--EECTTCCG
T ss_pred HHHHHHHHHHHHCC---------CCHHHHHHHHHHHhcCCCEEEEeccCHHHHhhHHHHHHHHHHcCCCE--EEeCCCCH
Q ss_pred hhhhhhhhhhhHHHHHhHHHHHHHHHHHHcCC
Q 012942 304 VDVNFLEKIDNFLLLLCLRQITYTDLADTYGL 335 (453)
Q Consensus 304 ~~~~~~~~~~n~~~l~~~~~~~~~~lA~~~gL 335 (453)
++.. .+.+.|+++||
T Consensus 128 eE~~-----------------~~~~~~~~~Gl 142 (252)
T 3tha_A 128 EESD-----------------DLIKECERYNI 142 (252)
T ss_dssp GGCH-----------------HHHHHHHHTTC
T ss_pred HHHH-----------------HHHHHHHHcCC
No 131
>1xrt_A Dihydroorotase, dhoase; amidohydrolase, metalloenzyme, pyrimidine; 1.61A {Aquifex aeolicus} SCOP: b.92.1.3 c.1.9.6 PDB: 1xrf_A 3d6n_A*
Probab=23.44 E-value=1.1e+02 Score=30.52 Aligned_cols=61 Identities=10% Similarity=0.127 Sum_probs=37.8
Q ss_pred ceeEceeeeCcCC--CCCCCHHHHHHHHHHcCCcEEEEecCC-CC-C---CHHHHHHHHHhcC-CeEEe
Q 012942 72 NVVFELHSHSNFS--DGYLSPSKLVERAHCNGVKVLALTDHD-TM-S---GIPEAIETARRFG-MKIIP 132 (453)
Q Consensus 72 ~~~~DLH~HT~~S--DG~~tp~elv~~A~~~Gl~~IAITDHd-t~-~---g~~e~~~~a~~~g-i~vI~ 132 (453)
+-++|.|+|...+ +-..+.....+.+.+.|+..+..+-.. .. . .+..+.+.++..| +.+++
T Consensus 100 PGlID~H~H~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 168 (467)
T 1xrt_A 100 PGFIDIHVHLRDPGQTYKEDIESGSRCAVAGGFTTIVCMPNTNPPIDNTTVVNYILQKSKSVGLCRVLP 168 (467)
T ss_dssp ECEEEEEECCCTTTCTTTCCHHHHHHHHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEEEE
T ss_pred cCEEEEeecccCCCCCchhhHHHHHHHHHhCCeEEEEecCCCCCCCChHHHHHHHHHHhcccCcceEEE
Confidence 3489999998653 223457778899999999887654321 11 1 2344445555566 55543
No 132
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=22.88 E-value=65 Score=29.53 Aligned_cols=16 Identities=13% Similarity=0.075 Sum_probs=8.3
Q ss_pred CHHHHHHHHHHcCCEE
Q 012942 253 LAEVAVQLIHRTGGLA 268 (453)
Q Consensus 253 ~~eeaI~~I~~aGGva 268 (453)
+++++++.++++|-=.
T Consensus 24 ~~~~~l~~a~~~G~~~ 39 (264)
T 1yx1_A 24 GQASFLPLLAMAGAQR 39 (264)
T ss_dssp CGGGGHHHHHHHTCSE
T ss_pred CHHHHHHHHHHcCCCE
Confidence 3455566665555333
No 133
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=22.86 E-value=1.2e+02 Score=28.45 Aligned_cols=21 Identities=14% Similarity=0.045 Sum_probs=16.6
Q ss_pred HHHHHHHHcCCcEEEEeCCCC
Q 012942 281 AIIRKLKDVGLHGLEVYRSDG 301 (453)
Q Consensus 281 ~li~~l~~~GldGIEV~~~~~ 301 (453)
+++..|.+.|+|+||+=.|..
T Consensus 35 ~~~~~l~~~G~D~IElG~P~s 55 (262)
T 2ekc_A 35 KAFKEVLKNGTDILEIGFPFS 55 (262)
T ss_dssp HHHHHHHHTTCSEEEEECCCS
T ss_pred HHHHHHHHcCCCEEEECCCCC
Confidence 466778889999999976654
No 134
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=22.69 E-value=1.4e+02 Score=25.95 Aligned_cols=49 Identities=12% Similarity=0.189 Sum_probs=34.2
Q ss_pred CCCCCHHHHHHHHHHcCCcEEEEecCCCCC--CHHHHHHHHHhc---CCeEEeE
Q 012942 85 DGYLSPSKLVERAHCNGVKVLALTDHDTMS--GIPEAIETARRF---GMKIIPG 133 (453)
Q Consensus 85 DG~~tp~elv~~A~~~Gl~~IAITDHdt~~--g~~e~~~~a~~~---gi~vI~G 133 (453)
....+|+++++.|.+.+.+.|+++=-.+.. .+.+..+..++. +++++.|
T Consensus 53 G~~~p~e~lv~aa~~~~~diV~lS~~~~~~~~~~~~~i~~L~~~g~~~i~v~vG 106 (161)
T 2yxb_A 53 GLRQTPEQVAMAAVQEDVDVIGVSILNGAHLHLMKRLMAKLRELGADDIPVVLG 106 (161)
T ss_dssp CSBCCHHHHHHHHHHTTCSEEEEEESSSCHHHHHHHHHHHHHHTTCTTSCEEEE
T ss_pred CCCCCHHHHHHHHHhcCCCEEEEEeechhhHHHHHHHHHHHHhcCCCCCEEEEe
Confidence 556899999999999999999998654432 234444455544 3666665
No 135
>2zxd_A Alpha-L-fucosidase, putative; TIM barrel, hydrolase; HET: ZXD; 2.15A {Thermotoga maritima} PDB: 2zwy_A* 2zx5_A* 2zx6_A* 2zx7_A* 2zwz_A* 2zx9_A* 2zxa_A* 2zxb_A* 2zx8_A* 1hl9_A* 1hl8_A* 1odu_A* 2wsp_A*
Probab=22.68 E-value=1.5e+02 Score=30.48 Aligned_cols=52 Identities=17% Similarity=0.238 Sum_probs=38.8
Q ss_pred CCCCCCHHHHHHHHHHcCCcEEEEec-C--------------CCCC------CHHHHHHHHHhcCCeEEeEEEEE
Q 012942 84 SDGYLSPSKLVERAHCNGVKVLALTD-H--------------DTMS------GIPEAIETARRFGMKIIPGVEIS 137 (453)
Q Consensus 84 SDG~~tp~elv~~A~~~Gl~~IAITD-H--------------dt~~------g~~e~~~~a~~~gi~vI~GiEis 137 (453)
.-..+.|++.++.|++.|++.+.+|= | +++. =+.++.++|++.||++. +=+|
T Consensus 101 ~p~~fDp~~Wa~~~k~AGakyvvlTaKHHDGF~lwpSk~t~~ns~~~~pkrDlv~El~~A~rk~Glk~G--lY~S 173 (455)
T 2zxd_A 101 TAEKWDPQEWADLFKKAGAKYVIPTTKHHDGFCLWGTKYTDFNSVKRGPKRDLVGDLAKAVREAGLRFG--VYYS 173 (455)
T ss_dssp CCTTCCHHHHHHHHHHTTCSEEEEEEECTTCCBSSCCSSCSCBTTTSTTCSCHHHHHHHHHHHTTCEEE--EEEE
T ss_pred CcccCCHHHHHHHHHHhCCCEEEEEeeccCCccccCCCCCCCcccccCCCCChHHHHHHHHHHcCCeEE--EEec
Confidence 35679999999999999999999872 2 2221 14678889999998764 4444
No 136
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*
Probab=22.51 E-value=2e+02 Score=26.84 Aligned_cols=15 Identities=0% Similarity=-0.135 Sum_probs=11.9
Q ss_pred HHHHHHHHcCCeeee
Q 012942 325 TYTDLADTYGLLKLG 339 (453)
Q Consensus 325 ~~~~lA~~~gLl~tg 339 (453)
.+.++|.++|+.+.-
T Consensus 149 ~~~~~a~~~~lpv~i 163 (327)
T 2dvt_A 149 PFWGEVEKLDVPFYL 163 (327)
T ss_dssp HHHHHHHHHTCCEEE
T ss_pred HHHHHHHHcCCeEEE
Confidence 567889999997753
No 137
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=22.43 E-value=1.1e+02 Score=28.51 Aligned_cols=46 Identities=20% Similarity=0.148 Sum_probs=35.9
Q ss_pred CCCHHHHHHHHHHcCCcEEEEecCC------CCCCHHHHHHHHHhcCCeEEe
Q 012942 87 YLSPSKLVERAHCNGVKVLALTDHD------TMSGIPEAIETARRFGMKIIP 132 (453)
Q Consensus 87 ~~tp~elv~~A~~~Gl~~IAITDHd------t~~g~~e~~~~a~~~gi~vI~ 132 (453)
..++++.++.|++.|++.|-|.-.+ .-....++.+.+++.||.+..
T Consensus 35 ~~~~~~~l~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~ 86 (296)
T 2g0w_A 35 EVSFPKRVKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMKVTE 86 (296)
T ss_dssp TSCHHHHHHHHHHTTCSEEEEEHHHHHHHHHTTCCHHHHHHHHHHTTCEEEE
T ss_pred CCCHHHHHHHHHHcCCCEEEeCHHHHHHHHhcCCcHHHHHHHHHHcCCceEe
Confidence 3799999999999999999987532 123566788888889988643
No 138
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=22.32 E-value=1.1e+02 Score=25.88 Aligned_cols=38 Identities=29% Similarity=0.272 Sum_probs=29.3
Q ss_pred HHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcCCeEE
Q 012942 91 SKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKII 131 (453)
Q Consensus 91 ~elv~~A~~~Gl~~IAITDHdt~~g~~e~~~~a~~~gi~vI 131 (453)
.++++.+.+.|...+.++... ...++.+.+++.|++++
T Consensus 91 ~~vv~~~~~~gi~~i~~~~g~---~~~~l~~~a~~~Gi~vv 128 (144)
T 2d59_A 91 MEYVEQAIKKGAKVVWFQYNT---YNREASKKADEAGLIIV 128 (144)
T ss_dssp HHHHHHHHHHTCSEEEECTTC---CCHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHcCCCEEEECCCc---hHHHHHHHHHHcCCEEE
Confidence 456888899999998776432 25778888999999876
No 139
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=21.60 E-value=43 Score=30.63 Aligned_cols=57 Identities=16% Similarity=0.068 Sum_probs=40.1
Q ss_pred ceeEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCC-----CCCHHHHHHHHHhcCCeEE
Q 012942 72 NVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDT-----MSGIPEAIETARRFGMKII 131 (453)
Q Consensus 72 ~~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~IAITDHdt-----~~g~~e~~~~a~~~gi~vI 131 (453)
.|++-++. +.+ ...++++.++.+++.|++.|-+.-.+. -....++.+.+++.|+.+.
T Consensus 3 ~Mk~~~~~-~~~--~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~~~ 64 (281)
T 3u0h_A 3 AMEPCLHP-TLV--DETSLVLYLDLARETGYRYVDVPFHWLEAEAERHGDAAVEAMFQRRGLVLA 64 (281)
T ss_dssp CCEEEECG-GGT--TCCCHHHHHHHHHHTTCSEECCCHHHHHHHHHHHCHHHHHHHHHTTTCEEC
T ss_pred cchhhhcc-hhc--cCCCHHHHHHHHHHcCCCEEEecHHHHHHHhcccCHHHHHHHHHHcCCceE
Confidence 35555554 333 347899999999999999998875431 1245667777888898763
No 140
>2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15
Probab=21.30 E-value=3.1e+02 Score=26.16 Aligned_cols=67 Identities=9% Similarity=0.067 Sum_probs=35.8
Q ss_pred HHHHHHHcCC--EEEEeCCCCC----CChHHHHHHHH-HcCCcEEEEeCCC---C----ChhhhhhhhhhhhHHHHHhHH
Q 012942 257 AVQLIHRTGG--LAVLAHPWAL----KNPAAIIRKLK-DVGLHGLEVYRSD---G----KLVDVNFLEKIDNFLLLLCLR 322 (453)
Q Consensus 257 aI~~I~~aGG--vaVLAHP~~~----~~~~~li~~l~-~~GldGIEV~~~~---~----~~~~~~~~~~~~n~~~l~~~~ 322 (453)
+.++++...+ +++..||... ....+.++++. +.|+.|||+.... + ...+..+
T Consensus 96 ~~~~~~~~p~rf~~~~~~p~~~~~~~~~a~~eL~r~~~~~g~~Gv~l~~~~~~~~~~~~~l~d~~~-------------- 161 (350)
T 2gwg_A 96 CYRVSQLFPDNFIGAAMLPQSPGVDPKTCIPELEKCVKEYGFVAINLNPDPSGGHWTSPPLTDRIW-------------- 161 (350)
T ss_dssp HHHHHHHSTTTEEEEEECCCCTTSCGGGGHHHHHHHHHTSCCCEEEECSCTTSSCCCSCCTTSGGG--------------
T ss_pred HHHHHHhCCCcEEEEEeCCCCCCCCHHHHHHHHHHHHhccCCeEEEECCCCCCccCCCCCCCCHHH--------------
Confidence 3444444433 3445566421 12234455555 6799999985321 0 1111111
Q ss_pred HHHHHHHHHHcCCeee
Q 012942 323 QITYTDLADTYGLLKL 338 (453)
Q Consensus 323 ~~~~~~lA~~~gLl~t 338 (453)
..+.++|.++|+.+.
T Consensus 162 -~p~~~~a~e~~lpv~ 176 (350)
T 2gwg_A 162 -YPIYEKMVELEIPAM 176 (350)
T ss_dssp -HHHHHHHHHHTCCEE
T ss_pred -HHHHHHHHHcCCeEE
Confidence 156788999999876
No 141
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=21.27 E-value=74 Score=28.65 Aligned_cols=55 Identities=9% Similarity=0.213 Sum_probs=38.8
Q ss_pred CceeEceeeeCcCCCCCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcCCeEEeEEEEEe
Q 012942 71 NNVVFELHSHSNFSDGYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIPGVEIST 138 (453)
Q Consensus 71 ~~~~~DLH~HT~~SDG~~tp~elv~~A~~~Gl~~IAITDHdt~~g~~e~~~~a~~~gi~vI~GiEis~ 138 (453)
..+..|+|.| |-..||+..++.+.+.|.+.+.+.= ..+. +..+.+.+.+ |+-+.+
T Consensus 52 ~~v~~D~kl~----DI~~t~~~~v~~~~~~Gad~vtvh~---~~g~-~~i~~~~~~~-----gv~vl~ 106 (208)
T 2czd_A 52 VEIIADLKLA----DIPNTNRLIARKVFGAGADYVIVHT---FVGR-DSVMAVKELG-----EIIMVV 106 (208)
T ss_dssp CEEEEEEEEC----SCHHHHHHHHHHHHHTTCSEEEEES---TTCH-HHHHHHHTTS-----EEEEEC
T ss_pred CEEEEEeeeC----chHHHHHHHHHHHHhcCCCEEEEec---cCCH-HHHHHHHHhC-----CcEEEE
Confidence 4688899998 7777899999999999999987732 2232 3355555554 555544
No 142
>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} SCOP: c.1.15.3 PDB: 1s5m_A* 1s5n_A* 2gyi_A* 1xyb_A* 1xyc_A* 1xya_A* 1xyl_A 1xym_A* 1dxi_A 3gnx_A* 1gw9_A* 1xib_A 1xic_A* 1xid_A* 1xie_A* 1xif_A* 1xig_A* 1xih_A* 1xii_A* 1xij_A ...
Probab=21.11 E-value=96 Score=30.59 Aligned_cols=49 Identities=16% Similarity=0.289 Sum_probs=31.3
Q ss_pred hHHHHHHHHHcCCcEEEEeC----CCCC-hhhhhhhhhhhhHHHHHhHHHHHHHHHHHHcCCeeeec
Q 012942 279 PAAIIRKLKDVGLHGLEVYR----SDGK-LVDVNFLEKIDNFLLLLCLRQITYTDLADTYGLLKLGG 340 (453)
Q Consensus 279 ~~~li~~l~~~GldGIEV~~----~~~~-~~~~~~~~~~~n~~~l~~~~~~~~~~lA~~~gLl~tgG 340 (453)
..+.++.+++.|++|||++. +... ..+.. .....+.++++++||-+++-
T Consensus 35 ~~e~l~~aa~~G~~~VEl~~~~~~p~~~~~~~~~-------------~~~~~l~~~l~~~GL~i~~~ 88 (386)
T 1muw_A 35 PVETVQRLAELGAHGVTFHDDDLIPFGSSDTERE-------------SHIKRFRQALDATGMTVPMA 88 (386)
T ss_dssp HHHHHHHHHHHTCCEEEEEHHHHSCTTCCHHHHH-------------HHHHHHHHHHHHHTCBCCEE
T ss_pred HHHHHHHHHHcCCCEEEeeCCCCCcccCcccccH-------------HHHHHHHHHHHHhCCeEEEE
Confidence 56678888889999999985 2221 11000 01126778899999977653
No 143
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=21.06 E-value=1.2e+02 Score=27.79 Aligned_cols=45 Identities=9% Similarity=-0.028 Sum_probs=36.1
Q ss_pred CCCCHHHHHHHHHHcCCcEEEEecCCCCCCHHHHHHHHHhcCCeEEe
Q 012942 86 GYLSPSKLVERAHCNGVKVLALTDHDTMSGIPEAIETARRFGMKIIP 132 (453)
Q Consensus 86 G~~tp~elv~~A~~~Gl~~IAITDHdt~~g~~e~~~~a~~~gi~vI~ 132 (453)
...++++.++.+++.|++.|-+..... ...++.+.+++.||.+..
T Consensus 29 ~~~~~~~~l~~~~~~G~~~vEl~~~~~--~~~~~~~~l~~~gl~~~~ 73 (301)
T 3cny_A 29 KDNNLQQLLSDIVVAGFQGTEVGGFFP--GPEKLNYELKLRNLEIAG 73 (301)
T ss_dssp TTCCHHHHHHHHHHHTCCEECCCTTCC--CHHHHHHHHHHTTCEECE
T ss_pred cCCCHHHHHHHHHHhCCCEEEecCCCC--CHHHHHHHHHHCCCeEEE
Confidence 357899999999999999999984322 567788888889988754
No 144
>4h41_A Putative alpha-L-fucosidase; hydrolase, carbohydrate metabolism, HOST glycans, structural genomics; HET: MSE 1PE PE4 PG4 PG6; 1.80A {Bacteroides thetaiotaomicron}
Probab=21.06 E-value=1e+02 Score=30.69 Aligned_cols=51 Identities=12% Similarity=0.160 Sum_probs=37.8
Q ss_pred CCCHHHH---HHHHHHcCCcEEEEec-C-CCC------------------CCHHHHHHHHHhcCCeEEeEEEEE
Q 012942 87 YLSPSKL---VERAHCNGVKVLALTD-H-DTM------------------SGIPEAIETARRFGMKIIPGVEIS 137 (453)
Q Consensus 87 ~~tp~el---v~~A~~~Gl~~IAITD-H-dt~------------------~g~~e~~~~a~~~gi~vI~GiEis 137 (453)
.+++++- ++.+++.|++.|.+|- | +.. .-+.++.++|++.|++++.|+=.+
T Consensus 50 nWd~~eW~~~~~~mK~~GikyvIl~~~~~~gf~~~pS~~~~~~~~~~p~~Dlv~~~l~aa~k~Gmkv~~Gly~S 123 (340)
T 4h41_A 50 NWGEKEWDLDFQHMKRIGIDTVIMIRSGYRKFMTYPSPYLLKKGCYMPSVDLVDMYLRLAEKYNMKFYFGLYDS 123 (340)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEEESCSEETTEESSCCHHHHHTTCCCCSBCHHHHHHHHHHHTTCEEEEECCBC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEEEEeeCCeeccCcccccccCccCCcccHHHHHHHHHHHhCCeEEEecCCC
Confidence 3777776 8889999999888864 2 110 116778899999999999997443
No 145
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=20.94 E-value=2.5e+02 Score=26.83 Aligned_cols=95 Identities=13% Similarity=0.062 Sum_probs=55.7
Q ss_pred CCHHHHHHHHH---H--cCCEEEEeCCCCCCC--hHHHHHHHHHcCCcEEEEeCCCCC-hhhhhhhhhhhhHHHHHhHHH
Q 012942 252 PLAEVAVQLIH---R--TGGLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDGK-LVDVNFLEKIDNFLLLLCLRQ 323 (453)
Q Consensus 252 ~~~eeaI~~I~---~--aGGvaVLAHP~~~~~--~~~li~~l~~~GldGIEV~~~~~~-~~~~~~~~~~~n~~~l~~~~~ 323 (453)
++.+|=.++++ + .|.++|+||-+.... ..++.+...+.|.||+=+..|++. +.+.. + .
T Consensus 57 Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~----l----------~ 122 (297)
T 3flu_A 57 LSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVPYYNKPSQEG----I----------Y 122 (297)
T ss_dssp SCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHH----H----------H
T ss_pred CCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHH----H----------H
Confidence 45555443332 2 367899999876432 224556667889999999987643 33221 1 1
Q ss_pred HHHHHHHHHcCCeeeeccCCCCCCCCCCcccCCccCChhHHHHHhc
Q 012942 324 ITYTDLADTYGLLKLGGSDYHGRGGHGESELGSVKLPVLVLNDFLK 369 (453)
Q Consensus 324 ~~~~~lA~~~gLl~tgGSDfHg~~~~~~~~lG~~~~p~~~~~~~~~ 369 (453)
..|.++|+.-++++.- ||-|. .-.+.++.+++.+|.+
T Consensus 123 ~~f~~va~a~~lPiil---Yn~P~------~tg~~l~~~~~~~La~ 159 (297)
T 3flu_A 123 QHFKTIAEATSIPMII---YNVPG------RTVVSMTNDTILRLAE 159 (297)
T ss_dssp HHHHHHHHHCCSCEEE---EECHH------HHSSCCCHHHHHHHTT
T ss_pred HHHHHHHHhCCCCEEE---EECCc------hhccCCCHHHHHHHHc
Confidence 2678888887776653 33321 1124566666666653
No 146
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=20.75 E-value=1.7e+02 Score=27.08 Aligned_cols=68 Identities=9% Similarity=-0.003 Sum_probs=37.5
Q ss_pred HHHHHHHHcCC--EEEEeCCCCC-CChHHHHHHHH-HcCCcEEEEeCCCCC--hhhhhhhhhhhhHHHHHhHHHHHHHHH
Q 012942 256 VAVQLIHRTGG--LAVLAHPWAL-KNPAAIIRKLK-DVGLHGLEVYRSDGK--LVDVNFLEKIDNFLLLLCLRQITYTDL 329 (453)
Q Consensus 256 eaI~~I~~aGG--vaVLAHP~~~-~~~~~li~~l~-~~GldGIEV~~~~~~--~~~~~~~~~~~n~~~l~~~~~~~~~~l 329 (453)
.+.++++...+ +++..||... ....+.++++. +.|+.|||+....+. ..+..+ ..+.++
T Consensus 79 ~~~~~~~~~p~r~~~~~~~p~~~~~~~~~el~~~~~~~g~~gi~~~~~~~~~~~~~~~~---------------~~~~~~ 143 (307)
T 2f6k_A 79 DGKSLAQQYPDQLGYLASLPIPYELDAVKTVQQALDQDGALGVTVPTNSRGLYFGSPVL---------------ERVYQE 143 (307)
T ss_dssp HHHHHHHHCTTTEEEEECCCTTCHHHHHHHHHHHHHTSCCSEEEEESEETTEETTCGGG---------------HHHHHH
T ss_pred HHHHHHHhCccceeEEEeCCCCCHHHHHHHHHHHHhccCCcEEEEeccCCCCCCCcHhH---------------HHHHHH
Confidence 34555555444 3556677321 11123455555 469999998643211 111110 156788
Q ss_pred HHHcCCeee
Q 012942 330 ADTYGLLKL 338 (453)
Q Consensus 330 A~~~gLl~t 338 (453)
|.++|+++.
T Consensus 144 a~~~~lpv~ 152 (307)
T 2f6k_A 144 LDARQAIVA 152 (307)
T ss_dssp HHTTTCEEE
T ss_pred HHHcCCeEE
Confidence 999999887
No 147
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=20.68 E-value=1.4e+02 Score=28.85 Aligned_cols=40 Identities=23% Similarity=0.291 Sum_probs=25.3
Q ss_pred HHHHHHHHHHcCCEEEEeCCCCCCChHHHHHHHHHcCCcEEE
Q 012942 254 AEVAVQLIHRTGGLAVLAHPWALKNPAAIIRKLKDVGLHGLE 295 (453)
Q Consensus 254 ~eeaI~~I~~aGGvaVLAHP~~~~~~~~li~~l~~~GldGIE 295 (453)
+.++++.|++..|+.+-..|+.. ..+.++.|+++|++.+-
T Consensus 128 ~~~l~~~ik~~~~i~i~~s~g~~--~~e~l~~L~~aG~~~i~ 167 (350)
T 3t7v_A 128 FVELVQIVKEELGLPIMISPGLM--DNATLLKAREKGANFLA 167 (350)
T ss_dssp HHHHHHHHHHHHCSCEEEECSSC--CHHHHHHHHHTTEEEEE
T ss_pred HHHHHHHHHhhcCceEEEeCCCC--CHHHHHHHHHcCCCEEE
Confidence 35667777755456666666532 34567777788877664
No 148
>2i9u_A Cytosine/guanine deaminase related protein; protein structure initiative II (PSI-II), amidohydrol guanine deaminase; HET: GUN; 2.05A {Clostridium acetobutylicum} SCOP: b.92.1.4 c.1.9.9
Probab=20.46 E-value=1.2e+02 Score=29.67 Aligned_cols=41 Identities=17% Similarity=0.110 Sum_probs=25.5
Q ss_pred HHHHHHcCCcEEEEecCCCCC--CHHHHHHHHHhcCCeEEeEEEE
Q 012942 94 VERAHCNGVKVLALTDHDTMS--GIPEAIETARRFGMKIIPGVEI 136 (453)
Q Consensus 94 v~~A~~~Gl~~IAITDHdt~~--g~~e~~~~a~~~gi~vI~GiEi 136 (453)
++.+.+.|+..+. |+-+.. ....+.+.+.+.|++++.|..+
T Consensus 119 ~~~~l~~GvTtv~--~~~~~~~~~~~~~~~~~~~~g~r~~~~~~~ 161 (439)
T 2i9u_A 119 IKDLIKNGTTRVA--LFATLHKDSTIELFNMLIKSGIGAYVGKVN 161 (439)
T ss_dssp HHHHHHTTEEEEE--EECCSCHHHHHHHHHHHHHHTCEEEEECEE
T ss_pred HHHHHhcCceEEE--EccccccchHHHHHHHHHHcCCEEEEEeee
Confidence 3678889998876 333322 1344556666778877666544
No 149
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=20.42 E-value=2.8e+02 Score=26.52 Aligned_cols=95 Identities=14% Similarity=0.115 Sum_probs=55.2
Q ss_pred CCHHHHHHHH----HHcC--CEEEEeCCCCCCC--hHHHHHHHHHcCCcEEEEeCCCCC-hhhhhhhhhhhhHHHHHhHH
Q 012942 252 PLAEVAVQLI----HRTG--GLAVLAHPWALKN--PAAIIRKLKDVGLHGLEVYRSDGK-LVDVNFLEKIDNFLLLLCLR 322 (453)
Q Consensus 252 ~~~eeaI~~I----~~aG--GvaVLAHP~~~~~--~~~li~~l~~~GldGIEV~~~~~~-~~~~~~~~~~~n~~~l~~~~ 322 (453)
++.+|=.+++ ..++ .++|+||-+.... ..++.+...+.|.||+=+..|++. +.+.. +
T Consensus 57 Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~----l---------- 122 (301)
T 3m5v_A 57 LTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGADGILSVAPYYNKPTQQG----L---------- 122 (301)
T ss_dssp SCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHH----H----------
T ss_pred CCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHH----H----------
Confidence 4555543333 2334 4999999876432 224555667889999999987643 33221 1
Q ss_pred HHHHHHHHHHcCCeeeeccCCCCCCCCCCcccCCccCChhHHHHHhc
Q 012942 323 QITYTDLADTYGLLKLGGSDYHGRGGHGESELGSVKLPVLVLNDFLK 369 (453)
Q Consensus 323 ~~~~~~lA~~~gLl~tgGSDfHg~~~~~~~~lG~~~~p~~~~~~~~~ 369 (453)
...|.++|+.-++++.- ||-|. .-.+.++.+++.+|.+
T Consensus 123 ~~~f~~va~a~~lPiil---Yn~P~------~tg~~l~~~~~~~La~ 160 (301)
T 3m5v_A 123 YEHYKAIAQSVDIPVLL---YNVPG------RTGCEISTDTIIKLFR 160 (301)
T ss_dssp HHHHHHHHHHCSSCEEE---EECHH------HHSCCCCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCEEE---EeCch------hhCcCCCHHHHHHHHh
Confidence 12677888887776653 33321 1124566666666654
No 150
>3mdu_A N-formimino-L-glutamate iminohydrolase; amonohydralase family, N-formimino-L-glutamate iminohydrolas guanidino-L-glutamate; HET: NGQ; 1.40A {Pseudomonas aeruginosa} PDB: 3mdw_A*
Probab=20.30 E-value=1.8e+02 Score=28.95 Aligned_cols=63 Identities=22% Similarity=0.192 Sum_probs=38.6
Q ss_pred ceeEceeeeCcCC--CC------------------------CCCHHHH-------HHHHHHcCCcEEEE--ecCCCCCC-
Q 012942 72 NVVFELHSHSNFS--DG------------------------YLSPSKL-------VERAHCNGVKVLAL--TDHDTMSG- 115 (453)
Q Consensus 72 ~~~~DLH~HT~~S--DG------------------------~~tp~el-------v~~A~~~Gl~~IAI--TDHdt~~g- 115 (453)
+=+||.|+|...+ -| .++|+++ +..+.+.|+..+.- +-|....|
T Consensus 50 PGfId~H~H~~~~~~rg~~~~~~~~~~~l~~wl~~~~~~~~~~~~e~~~~~a~~~~~e~l~~GvTtv~d~~~~~~~~~g~ 129 (453)
T 3mdu_A 50 PGMPNLHSHAFQRAMAGLAEVAGNPNDSFWTWRELMYRMVARLSPEQIEVIACQLYIEMLKAGYTAVAEFHYVHHDLDGR 129 (453)
T ss_dssp ECEEEEEECGGGGGGTTTTCCCSSTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHTEEEEEEEECCCSCTTSC
T ss_pred ccceecccchHHHhhccccccccCCCCcHHHHHHHHhhhhhhCCHHHHHHHHHHHHHHHHHcCCcEEEEeeEeccccccc
Confidence 4588999998544 12 2466654 33366789887663 23432211
Q ss_pred --------HHHHHHHHHhcCCeEEeEE
Q 012942 116 --------IPEAIETARRFGMKIIPGV 134 (453)
Q Consensus 116 --------~~e~~~~a~~~gi~vI~Gi 134 (453)
...+.+++++.|++.+.+.
T Consensus 130 ~~~~~~~~~~~~~~a~~~~Gir~~~~~ 156 (453)
T 3mdu_A 130 SYADPAELSLRISRAASAAGIGLTLLP 156 (453)
T ss_dssp CCSSTTHHHHHHHHHHHHHTCEEEEEE
T ss_pred cccchhhHHHHHHHHHHHhCCeEEEec
Confidence 3456677788899877653
No 151
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=20.19 E-value=2.6e+02 Score=26.49 Aligned_cols=37 Identities=16% Similarity=0.056 Sum_probs=24.1
Q ss_pred CCEEEEeCCCCCCCh--HHHHHHHHHcCCcEEEEeCCCC
Q 012942 265 GGLAVLAHPWALKNP--AAIIRKLKDVGLHGLEVYRSDG 301 (453)
Q Consensus 265 GGvaVLAHP~~~~~~--~~li~~l~~~GldGIEV~~~~~ 301 (453)
|.++|+|+-+..... .++.+...+.|.||+=+..|++
T Consensus 68 gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 106 (289)
T 2yxg_A 68 GRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSITPYY 106 (289)
T ss_dssp TSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCS
T ss_pred CCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 458888887654322 2344555677888888877754
No 152
>3gri_A Dihydroorotase, dhoase; hydrolase, IDP00795, metal-binding, pyrimidine biosynthesis, structural genomics; 2.00A {Staphylococcus aureus subsp}
Probab=20.18 E-value=1.4e+02 Score=29.49 Aligned_cols=57 Identities=7% Similarity=-0.052 Sum_probs=37.7
Q ss_pred ceeEceeeeCcCC--CCCCCHHHHHHHHHHcCCcEEEEecCCCC--C---CHHHHHHHHHhcCC
Q 012942 72 NVVFELHSHSNFS--DGYLSPSKLVERAHCNGVKVLALTDHDTM--S---GIPEAIETARRFGM 128 (453)
Q Consensus 72 ~~~~DLH~HT~~S--DG~~tp~elv~~A~~~Gl~~IAITDHdt~--~---g~~e~~~~a~~~gi 128 (453)
+-++|+|+|.... ....+.....+.|.+.|+..+..+-+... . .+....+.++..++
T Consensus 52 PG~iD~H~H~~~~g~~~~~~~~~~~~~~~~~G~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (424)
T 3gri_A 52 PGFVDVHVHLREPGGEYKETIETGTKAAARGGFTTVCPMPNTRPVPDSVEHFEALQKLIDDNAQ 115 (424)
T ss_dssp ECEEEEEECCCTTTCTTTCCHHHHHHHHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCS
T ss_pred eCeEEeeecCCCCCCCCHHHHHHHHHHHHhCCEEEEeECcCCCCCCChHHHHHHHHHHhccCCC
Confidence 4588999997643 23446778899999999998877665221 1 23444555555555
No 153
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=20.04 E-value=2.9e+02 Score=26.24 Aligned_cols=37 Identities=22% Similarity=0.179 Sum_probs=23.3
Q ss_pred CCEEEEeCCCCCCCh--HHHHHHHHHcCCcEEEEeCCCC
Q 012942 265 GGLAVLAHPWALKNP--AAIIRKLKDVGLHGLEVYRSDG 301 (453)
Q Consensus 265 GGvaVLAHP~~~~~~--~~li~~l~~~GldGIEV~~~~~ 301 (453)
|.++|+|+-+..... .++.+...+.|.||+=+..|++
T Consensus 68 grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 106 (294)
T 2ehh_A 68 GRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVVPYY 106 (294)
T ss_dssp TSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred CCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 447888887654321 2344455677888888877654
Done!