Query 012943
Match_columns 453
No_of_seqs 257 out of 1733
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 19:14:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012943.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012943hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gr4_A Pyruvate kinase isozyme 100.0 5E-108 2E-112 869.1 37.7 349 91-440 54-415 (550)
2 3khd_A Pyruvate kinase; malari 100.0 2E-108 7E-113 867.3 29.3 343 96-439 43-389 (520)
3 3hqn_D Pyruvate kinase, PK; TI 100.0 7E-108 2E-112 861.6 33.0 344 94-439 15-364 (499)
4 4drs_A Pyruvate kinase; glycol 100.0 1E-106 4E-111 857.7 38.3 349 94-443 39-399 (526)
5 3gg8_A Pyruvate kinase; malari 100.0 7E-107 2E-111 855.1 34.7 342 97-439 34-380 (511)
6 3qtg_A Pyruvate kinase, PK; TI 100.0 3E-106 1E-110 840.4 34.6 336 97-436 13-352 (461)
7 1e0t_A Pyruvate kinase, PK; ph 100.0 7E-106 2E-110 843.3 36.0 342 98-440 1-346 (470)
8 3t05_A Pyruvate kinase, PK; te 100.0 3E-106 1E-110 865.5 32.1 344 95-439 19-365 (606)
9 2e28_A Pyruvate kinase, PK; al 100.0 6E-104 2E-108 849.5 37.1 337 98-435 2-342 (587)
10 1a3w_A Pyruvate kinase; allost 100.0 1E-100 4E-105 809.8 29.1 341 96-436 16-362 (500)
11 1izc_A Macrophomate synthase i 99.7 5.6E-19 1.9E-23 179.2 6.0 150 271-435 108-304 (339)
12 2vws_A YFAU, 2-keto-3-deoxy su 99.7 1E-18 3.6E-23 171.5 -0.8 125 270-408 80-239 (267)
13 2v5j_A 2,4-dihydroxyhept-2-ENE 99.7 2.9E-17 9.9E-22 163.1 7.7 125 270-408 101-260 (287)
14 3qz6_A HPCH/HPAI aldolase; str 99.7 1.1E-16 3.8E-21 156.8 10.3 127 271-410 79-240 (261)
15 1dxe_A 2-dehydro-3-deoxy-galac 99.6 2.4E-16 8.2E-21 153.7 9.6 126 270-409 81-240 (256)
16 1sgj_A Citrate lyase, beta sub 99.6 1.8E-15 6.1E-20 149.5 11.4 130 267-405 81-220 (284)
17 2xz9_A Phosphoenolpyruvate-pro 99.4 9E-13 3.1E-17 132.9 8.8 134 262-406 117-277 (324)
18 3qll_A Citrate lyase; beta bar 99.3 4.6E-12 1.6E-16 127.3 10.6 132 266-405 113-255 (316)
19 1u5h_A CITE; TIM barrel, struc 99.3 2E-11 6.8E-16 120.1 11.1 126 266-406 70-209 (273)
20 3qqw_A Putative citrate lyase; 99.2 1.6E-11 5.4E-16 124.2 10.4 133 266-405 94-254 (332)
21 3r4i_A Citrate lyase; TIM beta 99.2 1.5E-10 5.3E-15 117.3 12.2 158 266-431 93-285 (339)
22 2ols_A Phosphoenolpyruvate syn 99.1 3.9E-11 1.3E-15 133.7 8.2 132 265-406 622-777 (794)
23 2hwg_A Phosphoenolpyruvate-pro 99.1 2.2E-10 7.4E-15 123.4 10.0 133 263-406 367-526 (575)
24 3oyz_A Malate synthase; TIM ba 99.1 3.8E-10 1.3E-14 117.1 10.5 133 266-405 94-258 (433)
25 2wqd_A Phosphoenolpyruvate-pro 99.1 2.7E-10 9.2E-15 122.6 9.3 128 268-406 374-528 (572)
26 1vbg_A Pyruvate,orthophosphate 98.6 6.4E-08 2.2E-12 108.7 8.4 116 280-406 701-860 (876)
27 1kbl_A PPDK, pyruvate phosphat 98.5 1.8E-07 6.3E-12 105.0 8.0 116 280-406 695-854 (873)
28 3cuz_A MSA, malate synthase A; 98.1 1E-05 3.4E-10 86.3 10.8 135 268-406 193-366 (532)
29 3cux_A Malate synthase; TIM ba 98.0 9.4E-06 3.2E-10 86.4 8.5 125 278-406 202-364 (528)
30 1p7t_A MSG, malate synthase G; 97.9 1.4E-05 4.8E-10 86.9 7.7 133 268-407 370-537 (731)
31 1h6z_A Pyruvate phosphate diki 97.7 0.00015 5E-09 81.8 11.1 135 261-406 698-880 (913)
32 2x0s_A Pyruvate phosphate diki 97.0 0.0037 1.3E-07 70.8 12.2 113 283-406 727-880 (913)
33 4af0_A Inosine-5'-monophosphat 96.7 0.034 1.2E-06 59.3 15.7 126 266-407 279-414 (556)
34 1jqo_A Phosphoenolpyruvate car 95.3 0.041 1.4E-06 62.4 9.3 113 274-386 519-653 (970)
35 3odm_A Pepcase, PEPC, phosphoe 95.3 0.023 7.9E-07 60.4 6.5 93 279-371 138-260 (560)
36 1jqn_A Pepcase, PEPC, phosphoe 94.7 0.028 9.7E-07 63.2 5.7 151 279-429 467-638 (883)
37 3f4w_A Putative hexulose 6 pho 94.6 0.37 1.3E-05 44.0 12.1 137 273-428 70-209 (211)
38 3ovp_A Ribulose-phosphate 3-ep 94.1 0.42 1.4E-05 45.2 11.7 138 273-430 80-221 (228)
39 3ffs_A Inosine-5-monophosphate 94.1 0.49 1.7E-05 48.7 13.1 119 270-406 146-275 (400)
40 3inp_A D-ribulose-phosphate 3- 94.0 0.25 8.5E-06 47.6 10.0 140 272-427 101-244 (246)
41 3usb_A Inosine-5'-monophosphat 93.6 1.2 4E-05 47.1 15.1 126 267-407 255-389 (511)
42 1h1y_A D-ribulose-5-phosphate 93.5 1.5 5E-05 40.9 14.2 138 272-428 79-223 (228)
43 4fo4_A Inosine 5'-monophosphat 93.2 2.1 7.2E-05 43.4 15.7 123 268-406 108-240 (366)
44 3khj_A Inosine-5-monophosphate 92.8 2 6.8E-05 43.4 14.9 119 270-406 107-236 (361)
45 3ctl_A D-allulose-6-phosphate 92.4 1.6 5.3E-05 41.4 12.7 139 273-428 73-219 (231)
46 2qjg_A Putative aldolase MJ040 92.4 1.9 6.5E-05 41.0 13.5 42 114-155 102-145 (273)
47 4fxs_A Inosine-5'-monophosphat 92.4 1.7 5.8E-05 45.7 14.1 123 267-406 230-363 (496)
48 4avf_A Inosine-5'-monophosphat 92.2 1.5 5E-05 46.1 13.4 123 267-406 228-361 (490)
49 3r2g_A Inosine 5'-monophosphat 92.0 2.6 9E-05 42.7 14.4 119 267-406 99-228 (361)
50 2fli_A Ribulose-phosphate 3-ep 91.6 2 6.8E-05 39.2 12.2 137 273-426 77-218 (220)
51 1tqj_A Ribulose-phosphate 3-ep 91.3 0.63 2.2E-05 43.8 8.6 139 272-425 77-220 (230)
52 3ajx_A 3-hexulose-6-phosphate 91.0 1.8 6.2E-05 39.2 11.1 132 273-424 70-204 (207)
53 2z6i_A Trans-2-enoyl-ACP reduc 90.8 1.8 6.3E-05 42.7 11.7 111 271-406 79-191 (332)
54 1ydn_A Hydroxymethylglutaryl-C 90.6 2.4 8.2E-05 41.1 12.2 158 265-429 23-197 (295)
55 3igs_A N-acetylmannosamine-6-p 90.5 4.6 0.00016 38.1 13.7 135 270-429 91-230 (232)
56 3ble_A Citramalate synthase fr 90.3 4.8 0.00016 40.1 14.3 159 264-429 37-211 (337)
57 2c6q_A GMP reductase 2; TIM ba 90.2 5.6 0.00019 39.8 14.9 123 269-407 119-253 (351)
58 1jcn_A Inosine monophosphate d 90.2 6.7 0.00023 41.0 16.0 123 269-407 256-388 (514)
59 1tqx_A D-ribulose-5-phosphate 89.6 1.4 4.7E-05 41.7 9.2 131 281-427 86-222 (227)
60 3jr2_A Hexulose-6-phosphate sy 89.4 1 3.6E-05 41.7 8.1 137 274-428 77-215 (218)
61 3bo9_A Putative nitroalkan dio 89.2 5.5 0.00019 39.3 13.7 113 270-407 92-206 (326)
62 3cu2_A Ribulose-5-phosphate 3- 89.0 2.8 9.7E-05 39.8 11.0 134 271-425 83-235 (237)
63 1y0e_A Putative N-acetylmannos 88.9 4.8 0.00016 36.7 12.3 137 270-425 78-220 (223)
64 1w8s_A FBP aldolase, fructose- 88.5 2.9 9.8E-05 40.2 10.8 128 266-406 39-179 (263)
65 1gte_A Dihydropyrimidine dehyd 88.3 5.2 0.00018 45.6 14.5 120 274-408 655-818 (1025)
66 1rpx_A Protein (ribulose-phosp 88.3 4.7 0.00016 37.2 11.9 137 271-424 82-225 (230)
67 3eeg_A 2-isopropylmalate synth 88.3 14 0.00049 36.4 16.1 157 265-429 25-193 (325)
68 1w8s_A FBP aldolase, fructose- 88.3 7.3 0.00025 37.3 13.5 74 267-343 158-237 (263)
69 1p1x_A Deoxyribose-phosphate a 88.0 2.2 7.4E-05 41.4 9.5 150 262-429 22-193 (260)
70 3q58_A N-acetylmannosamine-6-p 87.3 5 0.00017 37.7 11.5 131 270-425 91-226 (229)
71 1vhc_A Putative KHG/KDPG aldol 87.3 7 0.00024 36.7 12.5 104 270-405 32-136 (224)
72 3bw2_A 2-nitropropane dioxygen 86.1 14 0.00049 36.7 14.8 112 270-406 112-237 (369)
73 3qja_A IGPS, indole-3-glycerol 86.1 9.3 0.00032 37.0 12.9 130 272-424 127-260 (272)
74 1q6o_A Humps, 3-keto-L-gulonat 86.1 7.9 0.00027 35.5 12.0 137 275-428 75-213 (216)
75 1mxs_A KDPG aldolase; 2-keto-3 85.9 12 0.00041 35.1 13.3 118 270-427 41-162 (225)
76 1h1y_A D-ribulose-5-phosphate 85.9 6.7 0.00023 36.3 11.5 134 270-429 22-171 (228)
77 1vrd_A Inosine-5'-monophosphat 85.4 7.9 0.00027 40.2 12.9 121 269-406 238-369 (494)
78 2gjl_A Hypothetical protein PA 85.1 12 0.00041 36.6 13.4 112 271-406 87-201 (328)
79 1yad_A Regulatory protein TENI 84.8 12 0.00042 34.1 12.7 131 274-428 82-214 (221)
80 1eep_A Inosine 5'-monophosphat 84.7 14 0.00047 37.4 14.1 119 269-405 154-284 (404)
81 1wbh_A KHG/KDPG aldolase; lyas 84.6 12 0.00041 34.8 12.5 104 270-405 31-135 (214)
82 1f76_A Dihydroorotate dehydrog 84.4 18 0.00062 35.3 14.4 118 278-407 163-319 (336)
83 1ydo_A HMG-COA lyase; TIM-barr 84.3 16 0.00056 35.7 13.9 156 264-428 24-198 (307)
84 2ftp_A Hydroxymethylglutaryl-C 83.9 8.3 0.00028 37.5 11.6 157 264-428 26-200 (302)
85 2yw3_A 4-hydroxy-2-oxoglutarat 83.6 10 0.00036 34.9 11.5 103 270-406 28-131 (207)
86 1vcv_A Probable deoxyribose-ph 83.2 1.9 6.6E-05 40.9 6.4 147 262-430 11-182 (226)
87 3tsm_A IGPS, indole-3-glycerol 82.9 16 0.00056 35.3 13.1 129 272-424 134-267 (272)
88 2cw6_A Hydroxymethylglutaryl-C 82.5 11 0.00037 36.6 11.7 161 264-429 23-198 (298)
89 3r12_A Deoxyribose-phosphate a 82.2 4.4 0.00015 39.3 8.6 142 263-426 54-213 (260)
90 3vnd_A TSA, tryptophan synthas 81.9 6.4 0.00022 38.1 9.7 92 269-370 34-153 (267)
91 1n7k_A Deoxyribose-phosphate a 81.8 5.5 0.00019 37.9 9.0 141 263-427 31-192 (234)
92 1me8_A Inosine-5'-monophosphat 81.7 24 0.0008 36.9 14.7 121 270-406 244-381 (503)
93 1yxy_A Putative N-acetylmannos 81.3 17 0.0006 33.3 12.2 134 270-426 91-232 (234)
94 4e38_A Keto-hydroxyglutarate-a 81.0 4.7 0.00016 38.4 8.2 38 355-406 117-154 (232)
95 3ngj_A Deoxyribose-phosphate a 81.0 5.9 0.0002 37.9 8.9 144 262-426 37-197 (239)
96 1xi3_A Thiamine phosphate pyro 80.9 29 0.00099 30.9 13.4 131 274-428 80-212 (215)
97 1ypf_A GMP reductase; GUAC, pu 80.8 21 0.00071 35.2 13.2 125 267-408 105-241 (336)
98 2qjg_A Putative aldolase MJ040 80.6 38 0.0013 31.7 15.9 135 271-428 103-259 (273)
99 3rmj_A 2-isopropylmalate synth 80.6 44 0.0015 33.7 15.7 158 264-429 30-199 (370)
100 1ub3_A Aldolase protein; schif 80.1 3.8 0.00013 38.5 7.2 143 263-426 14-173 (220)
101 1zfj_A Inosine monophosphate d 79.2 33 0.0011 35.3 14.7 122 268-406 233-365 (491)
102 1at0_A 17-hedgehog; developmen 79.1 6 0.0002 34.5 7.7 62 179-246 58-133 (145)
103 3m47_A Orotidine 5'-phosphate 79.0 21 0.00073 33.3 12.1 129 274-427 85-223 (228)
104 4g9p_A 4-hydroxy-3-methylbut-2 78.8 5.4 0.00018 41.0 8.3 153 270-429 41-222 (406)
105 1ka9_F Imidazole glycerol phos 78.3 38 0.0013 31.2 13.6 132 270-422 87-242 (252)
106 1mzh_A Deoxyribose-phosphate a 78.2 43 0.0015 31.0 14.3 144 263-425 15-171 (225)
107 3ivs_A Homocitrate synthase, m 78.0 66 0.0023 33.1 16.3 154 264-428 57-221 (423)
108 1zco_A 2-dehydro-3-deoxyphosph 77.7 40 0.0014 32.2 13.8 124 270-417 40-177 (262)
109 3oa3_A Aldolase; structural ge 77.0 6.2 0.00021 38.8 7.9 145 263-428 69-230 (288)
110 1jub_A Dihydroorotate dehydrog 76.9 47 0.0016 31.8 14.2 128 267-408 105-273 (311)
111 3exr_A RMPD (hexulose-6-phosph 76.8 36 0.0012 31.5 12.9 138 276-427 78-217 (221)
112 1thf_D HISF protein; thermophI 76.2 31 0.001 31.8 12.3 133 270-423 86-242 (253)
113 2tps_A Protein (thiamin phosph 76.1 34 0.0012 30.9 12.4 127 274-429 88-223 (227)
114 3i65_A Dihydroorotate dehydrog 75.5 57 0.0019 33.5 15.0 87 308-406 268-374 (415)
115 2qr6_A IMP dehydrogenase/GMP r 75.3 27 0.00092 35.0 12.4 116 275-408 173-308 (393)
116 3ewb_X 2-isopropylmalate synth 75.0 63 0.0021 31.3 16.9 158 264-429 23-192 (293)
117 3nvt_A 3-deoxy-D-arabino-heptu 74.8 24 0.00083 35.9 11.9 112 271-406 160-283 (385)
118 16pk_A PGK, 3-phosphoglycerate 74.5 3.9 0.00013 42.2 5.8 208 101-370 34-280 (415)
119 3qja_A IGPS, indole-3-glycerol 74.0 24 0.00083 33.9 11.2 108 269-407 73-190 (272)
120 3glc_A Aldolase LSRF; TIM barr 73.3 70 0.0024 31.2 14.4 132 273-428 131-279 (295)
121 3zwt_A Dihydroorotate dehydrog 72.4 83 0.0028 31.5 15.9 130 267-408 160-329 (367)
122 3vav_A 3-methyl-2-oxobutanoate 72.0 38 0.0013 33.0 12.0 133 262-406 31-193 (275)
123 2wqp_A Polysialic acid capsule 71.9 74 0.0025 31.9 14.5 128 269-424 37-203 (349)
124 1geq_A Tryptophan synthase alp 71.3 63 0.0021 29.7 14.8 120 270-406 98-220 (248)
125 4fxs_A Inosine-5'-monophosphat 71.2 7.6 0.00026 40.7 7.4 51 100-150 219-269 (496)
126 3ndo_A Deoxyribose-phosphate a 70.6 9.8 0.00034 36.1 7.3 148 263-427 24-188 (231)
127 1ep3_A Dihydroorotate dehydrog 70.3 75 0.0026 30.1 14.7 132 267-414 110-278 (311)
128 1vzw_A Phosphoribosyl isomeras 70.1 8.3 0.00029 35.7 6.7 125 272-414 37-174 (244)
129 3g8r_A Probable spore coat pol 69.7 36 0.0012 34.2 11.6 59 331-409 112-171 (350)
130 2cu0_A Inosine-5'-monophosphat 68.9 72 0.0024 32.9 14.2 119 270-407 230-358 (486)
131 1vc4_A Indole-3-glycerol phosp 68.8 39 0.0013 32.1 11.2 129 272-422 120-252 (254)
132 2czd_A Orotidine 5'-phosphate 68.5 24 0.00082 32.0 9.4 127 271-426 69-205 (208)
133 2v82_A 2-dehydro-3-deoxy-6-pho 68.4 57 0.0019 29.2 11.9 125 271-431 71-205 (212)
134 3q58_A N-acetylmannosamine-6-p 68.4 47 0.0016 31.0 11.5 114 263-405 31-155 (229)
135 2a4a_A Deoxyribose-phosphate a 67.8 9.4 0.00032 37.4 6.7 150 262-429 42-215 (281)
136 1rpx_A Protein (ribulose-phosp 67.8 72 0.0025 29.0 13.3 112 270-406 26-147 (230)
137 1wa3_A 2-keto-3-deoxy-6-phosph 67.7 67 0.0023 28.5 12.5 121 271-428 74-202 (205)
138 3igs_A N-acetylmannosamine-6-p 67.4 64 0.0022 30.0 12.3 114 263-405 31-155 (232)
139 2k8i_A SLYD, peptidyl-prolyl C 67.4 21 0.00072 32.1 8.5 60 180-239 51-119 (171)
140 1vzw_A Phosphoribosyl isomeras 67.2 41 0.0014 30.9 10.8 134 270-422 87-239 (244)
141 3noy_A 4-hydroxy-3-methylbut-2 67.1 1.1E+02 0.0038 30.9 14.5 140 270-428 49-202 (366)
142 3daq_A DHDPS, dihydrodipicolin 67.0 29 0.00098 33.5 10.0 97 271-371 27-134 (292)
143 2nv1_A Pyridoxal biosynthesis 66.5 37 0.0013 32.7 10.8 120 272-422 33-167 (305)
144 3iwp_A Copper homeostasis prot 65.5 94 0.0032 30.4 13.3 140 268-431 47-208 (287)
145 2gou_A Oxidoreductase, FMN-bin 65.5 78 0.0027 31.5 13.2 122 264-408 150-324 (365)
146 2y88_A Phosphoribosyl isomeras 65.3 36 0.0012 31.1 10.0 126 270-415 86-234 (244)
147 2uva_G Fatty acid synthase bet 65.1 25 0.00085 43.3 10.9 121 269-405 655-794 (2060)
148 2h6r_A Triosephosphate isomera 65.0 14 0.00047 34.3 7.0 130 274-423 76-216 (219)
149 2ztj_A Homocitrate synthase; ( 65.0 1.2E+02 0.004 30.4 17.9 154 264-428 21-185 (382)
150 1wv2_A Thiazole moeity, thiazo 64.9 1E+02 0.0036 29.8 16.7 141 266-427 85-237 (265)
151 1o66_A 3-methyl-2-oxobutanoate 64.7 41 0.0014 32.7 10.5 131 264-406 21-181 (275)
152 1tv5_A Dhodehase, dihydroorota 64.4 1E+02 0.0035 31.8 14.1 89 308-408 296-404 (443)
153 1rd5_A Tryptophan synthase alp 64.3 93 0.0032 29.0 13.1 93 268-371 33-149 (262)
154 4fo4_A Inosine 5'-monophosphat 64.1 12 0.00042 37.7 7.0 47 103-149 99-145 (366)
155 3fkr_A L-2-keto-3-deoxyarabona 63.9 24 0.00082 34.5 8.9 98 271-371 33-143 (309)
156 3f4w_A Putative hexulose 6 pho 63.6 81 0.0028 28.0 13.3 113 270-406 16-134 (211)
157 3ctl_A D-allulose-6-phosphate 63.4 97 0.0033 28.9 12.9 130 271-427 17-162 (231)
158 2ekc_A AQ_1548, tryptophan syn 62.9 65 0.0022 30.5 11.5 117 271-406 113-234 (262)
159 3vnd_A TSA, tryptophan synthas 62.8 43 0.0015 32.2 10.3 117 273-406 116-235 (267)
160 1wa3_A 2-keto-3-deoxy-6-phosph 62.7 43 0.0015 29.8 9.8 108 266-407 20-132 (205)
161 1h5y_A HISF; histidine biosynt 62.6 88 0.003 28.1 13.0 133 271-423 90-245 (253)
162 3qfe_A Putative dihydrodipicol 62.6 30 0.001 33.9 9.3 99 271-371 36-145 (318)
163 3hgj_A Chromate reductase; TIM 62.5 97 0.0033 30.5 13.2 133 264-408 141-320 (349)
164 3e96_A Dihydrodipicolinate syn 62.4 32 0.0011 33.6 9.5 98 271-372 37-144 (316)
165 3eb2_A Putative dihydrodipicol 62.4 38 0.0013 32.8 10.0 97 271-371 29-136 (300)
166 3qze_A DHDPS, dihydrodipicolin 62.0 30 0.001 33.9 9.2 97 271-371 48-155 (314)
167 1yad_A Regulatory protein TENI 61.8 91 0.0031 28.1 13.2 108 266-407 28-138 (221)
168 1eep_A Inosine 5'-monophosphat 61.7 11 0.00039 38.0 6.2 50 101-150 142-191 (404)
169 1nvm_A HOA, 4-hydroxy-2-oxoval 61.6 1.3E+02 0.0043 29.6 14.8 150 264-429 26-191 (345)
170 2v82_A 2-dehydro-3-deoxy-6-pho 61.6 80 0.0027 28.2 11.5 103 271-405 23-127 (212)
171 3khj_A Inosine-5-monophosphate 61.3 13 0.00043 37.5 6.4 46 103-150 98-143 (361)
172 3lab_A Putative KDPG (2-keto-3 61.0 31 0.0011 32.4 8.6 102 274-407 32-140 (217)
173 2kfw_A FKBP-type peptidyl-prol 60.5 11 0.00038 34.8 5.4 60 179-238 50-118 (196)
174 1vyr_A Pentaerythritol tetrani 60.3 1.1E+02 0.0037 30.5 13.1 126 264-408 150-325 (364)
175 3m5v_A DHDPS, dihydrodipicolin 60.3 76 0.0026 30.6 11.7 97 271-371 32-140 (301)
176 3o63_A Probable thiamine-phosp 60.2 71 0.0024 30.1 11.2 123 276-429 108-242 (243)
177 1aj0_A DHPS, dihydropteroate s 60.0 27 0.00092 34.0 8.3 68 100-170 14-102 (282)
178 3b4u_A Dihydrodipicolinate syn 60.0 53 0.0018 31.7 10.5 98 271-371 28-139 (294)
179 3usb_A Inosine-5'-monophosphat 59.9 13 0.00044 39.1 6.4 51 99-149 243-293 (511)
180 3kws_A Putative sugar isomeras 59.6 82 0.0028 29.1 11.5 145 271-422 42-216 (287)
181 4adt_A Pyridoxine biosynthetic 59.6 34 0.0012 33.5 9.0 57 361-428 203-260 (297)
182 3i65_A Dihydroorotate dehydrog 59.5 24 0.00081 36.4 8.2 100 263-366 278-401 (415)
183 3ru6_A Orotidine 5'-phosphate 59.5 1.4E+02 0.0047 29.3 13.4 37 392-428 216-252 (303)
184 2r8w_A AGR_C_1641P; APC7498, d 59.4 1E+02 0.0034 30.4 12.6 97 271-371 59-166 (332)
185 2p10_A MLL9387 protein; putati 59.0 20 0.00068 35.2 7.1 67 331-407 184-260 (286)
186 2w6r_A Imidazole glycerol phos 58.8 62 0.0021 30.0 10.5 128 270-415 86-238 (266)
187 2wkj_A N-acetylneuraminate lya 58.7 61 0.0021 31.4 10.7 97 271-371 36-144 (303)
188 3flu_A DHDPS, dihydrodipicolin 58.7 85 0.0029 30.2 11.7 97 271-371 32-139 (297)
189 3cqj_A L-ribulose-5-phosphate 58.3 57 0.0019 30.4 10.2 144 271-421 34-213 (295)
190 1xi3_A Thiamine phosphate pyro 58.1 99 0.0034 27.3 12.5 102 270-407 29-136 (215)
191 4ef8_A Dihydroorotate dehydrog 58.1 80 0.0027 31.6 11.7 117 278-407 153-307 (354)
192 3tak_A DHDPS, dihydrodipicolin 58.1 38 0.0013 32.6 9.1 97 271-371 26-133 (291)
193 2ehh_A DHDPS, dihydrodipicolin 58.0 1.2E+02 0.0042 29.0 12.7 97 271-371 25-132 (294)
194 3s5o_A 4-hydroxy-2-oxoglutarat 58.0 57 0.002 31.7 10.4 98 271-371 39-148 (307)
195 3cgm_A SLYD, peptidyl-prolyl C 57.9 48 0.0016 29.2 9.0 59 180-238 46-114 (158)
196 3l21_A DHDPS, dihydrodipicolin 57.9 29 0.001 33.7 8.3 97 271-371 40-147 (304)
197 3nav_A Tryptophan synthase alp 57.8 68 0.0023 30.9 10.7 115 273-406 118-237 (271)
198 3na8_A Putative dihydrodipicol 57.5 66 0.0022 31.4 10.8 97 271-371 49-156 (315)
199 2yxg_A DHDPS, dihydrodipicolin 57.2 1.3E+02 0.0043 28.8 12.6 97 271-371 25-132 (289)
200 4avf_A Inosine-5'-monophosphat 56.7 16 0.00054 38.2 6.5 51 100-150 217-267 (490)
201 1kbi_A Cytochrome B2, L-LCR; f 56.1 57 0.0019 34.3 10.6 119 292-431 332-460 (511)
202 1xm3_A Thiazole biosynthesis p 56.1 1.4E+02 0.0046 28.2 14.0 93 323-431 139-232 (264)
203 1jcn_A Inosine monophosphate d 55.7 15 0.0005 38.4 6.0 50 101-150 244-293 (514)
204 1qop_A Tryptophan synthase alp 55.6 77 0.0026 29.9 10.7 118 271-406 113-234 (268)
205 2htm_A Thiazole biosynthesis p 55.6 1.1E+02 0.0038 29.6 11.6 82 331-427 146-228 (268)
206 3m5v_A DHDPS, dihydrodipicolin 54.8 59 0.002 31.5 9.8 91 331-430 42-134 (301)
207 3nav_A Tryptophan synthase alp 54.7 87 0.003 30.1 10.9 106 254-370 22-155 (271)
208 4dt4_A FKBP-type 16 kDa peptid 54.7 53 0.0018 29.4 8.8 60 180-239 74-143 (169)
209 1f6k_A N-acetylneuraminate lya 54.6 1.5E+02 0.005 28.4 12.6 97 271-371 28-136 (293)
210 3cpr_A Dihydrodipicolinate syn 54.5 1.4E+02 0.005 28.7 12.6 97 271-371 41-148 (304)
211 4eiv_A Deoxyribose-phosphate a 54.5 47 0.0016 32.7 8.9 150 262-429 36-209 (297)
212 2e6f_A Dihydroorotate dehydrog 54.4 77 0.0026 30.3 10.6 43 356-410 233-277 (314)
213 3dx5_A Uncharacterized protein 54.4 1.3E+02 0.0045 27.5 12.3 146 271-423 19-191 (286)
214 3si9_A DHDPS, dihydrodipicolin 54.1 79 0.0027 30.9 10.7 97 271-371 47-154 (315)
215 1xky_A Dihydrodipicolinate syn 54.1 1.3E+02 0.0044 29.0 12.2 97 271-371 37-144 (301)
216 4djd_D C/Fe-SP, corrinoid/iron 54.0 58 0.002 32.3 9.7 150 267-429 141-317 (323)
217 2v9d_A YAGE; dihydrodipicolini 54.0 86 0.0029 31.0 11.1 97 271-371 56-163 (343)
218 1m3u_A 3-methyl-2-oxobutanoate 54.0 62 0.0021 31.2 9.7 131 264-406 21-181 (264)
219 3ovp_A Ribulose-phosphate 3-ep 53.8 1.2E+02 0.0041 28.1 11.4 115 271-412 21-148 (228)
220 2kr7_A FKBP-type peptidyl-prol 53.4 56 0.0019 28.4 8.6 60 180-239 56-124 (151)
221 1qpo_A Quinolinate acid phosph 53.1 23 0.00078 34.5 6.5 64 270-338 204-270 (284)
222 1tvn_A Cellulase, endoglucanas 52.8 26 0.00087 33.1 6.7 53 112-167 39-101 (293)
223 3ndz_A Endoglucanase D; cellot 52.7 33 0.0011 33.6 7.8 55 111-168 42-106 (345)
224 2rfg_A Dihydrodipicolinate syn 52.1 1.1E+02 0.0039 29.3 11.4 97 271-371 25-132 (297)
225 1to3_A Putative aldolase YIHT; 52.0 1.7E+02 0.006 28.3 13.6 58 364-431 220-291 (304)
226 1vs1_A 3-deoxy-7-phosphoheptul 51.9 1.7E+02 0.0058 28.1 12.6 126 271-421 56-196 (276)
227 2o55_A Putative glycerophospho 51.4 35 0.0012 31.8 7.4 58 354-427 201-258 (258)
228 2nli_A Lactate oxidase; flavoe 51.4 96 0.0033 31.0 11.0 95 291-407 217-314 (368)
229 2r14_A Morphinone reductase; H 51.4 1.4E+02 0.0047 29.9 12.2 34 362-408 296-330 (377)
230 3inp_A D-ribulose-phosphate 3- 51.1 1.2E+02 0.0042 28.6 11.2 132 271-428 44-191 (246)
231 3l5l_A Xenobiotic reductase A; 50.9 1.5E+02 0.005 29.4 12.3 128 264-407 147-326 (363)
232 3icg_A Endoglucanase D; cellul 50.2 18 0.00061 37.7 5.5 57 112-168 46-109 (515)
233 1tqj_A Ribulose-phosphate 3-ep 49.7 94 0.0032 28.7 10.0 134 271-429 21-167 (230)
234 3d0c_A Dihydrodipicolinate syn 49.5 1.2E+02 0.004 29.6 11.1 97 271-371 37-143 (314)
235 2qr6_A IMP dehydrogenase/GMP r 49.5 31 0.0011 34.6 7.0 70 271-344 223-313 (393)
236 1oy0_A Ketopantoate hydroxymet 49.2 1.2E+02 0.0041 29.5 10.9 132 263-406 37-199 (281)
237 1o5k_A DHDPS, dihydrodipicolin 49.1 1.4E+02 0.0049 28.8 11.6 97 271-371 37-144 (306)
238 1o4u_A Type II quinolic acid p 49.1 11 0.00037 37.0 3.4 64 270-338 203-269 (285)
239 1qop_A Tryptophan synthase alp 49.1 1.7E+02 0.0059 27.4 12.8 91 270-370 34-152 (268)
240 2y88_A Phosphoribosyl isomeras 48.4 32 0.0011 31.5 6.5 136 273-426 37-189 (244)
241 2nzl_A Hydroxyacid oxidase 1; 47.8 30 0.001 35.1 6.6 68 270-341 263-340 (392)
242 3dz1_A Dihydrodipicolinate syn 47.7 1.6E+02 0.0055 28.5 11.8 95 271-371 33-140 (313)
243 1egz_A Endoglucanase Z, EGZ, C 47.5 26 0.00089 33.0 5.8 53 112-167 39-99 (291)
244 2nx9_A Oxaloacetate decarboxyl 47.2 2.6E+02 0.0089 28.9 15.2 150 264-429 26-200 (464)
245 2vc6_A MOSA, dihydrodipicolina 47.1 1.5E+02 0.0052 28.3 11.4 97 271-371 25-132 (292)
246 4af0_A Inosine-5'-monophosphat 46.7 19 0.00064 38.5 5.0 51 100-150 269-319 (556)
247 3jr2_A Hexulose-6-phosphate sy 46.2 1.5E+02 0.0053 26.7 10.8 132 270-426 22-163 (218)
248 2z6i_A Trans-2-enoyl-ACP reduc 46.2 2.1E+02 0.0073 27.6 12.9 124 253-407 11-138 (332)
249 3h5d_A DHDPS, dihydrodipicolin 46.0 1.5E+02 0.0051 28.8 11.2 97 271-371 32-140 (311)
250 3nbm_A PTS system, lactose-spe 45.9 15 0.00053 30.6 3.5 62 294-370 22-83 (108)
251 3tfx_A Orotidine 5'-phosphate 45.8 1.9E+02 0.0065 27.6 11.6 130 275-427 78-237 (259)
252 1vrd_A Inosine-5'-monophosphat 45.5 26 0.00088 36.2 5.9 48 103-150 228-275 (494)
253 1edg_A Endoglucanase A; family 45.1 47 0.0016 32.7 7.5 57 109-168 59-124 (380)
254 2hmc_A AGR_L_411P, dihydrodipi 45.1 71 0.0024 31.7 8.8 96 271-371 51-157 (344)
255 3flu_A DHDPS, dihydrodipicolin 44.9 1.3E+02 0.0046 28.8 10.6 90 331-430 42-133 (297)
256 1ujp_A Tryptophan synthase alp 44.8 74 0.0025 30.4 8.6 116 273-406 112-229 (271)
257 1p0k_A Isopentenyl-diphosphate 44.8 1.4E+02 0.0046 29.2 10.8 55 365-431 251-308 (349)
258 3knb_A Titin; IG-like, titin, 44.7 89 0.003 24.2 7.8 72 177-249 13-91 (100)
259 1qo2_A Molecule: N-((5-phospho 44.6 1.1E+02 0.0037 27.9 9.6 129 270-419 85-236 (241)
260 3tha_A Tryptophan synthase alp 44.4 1.2E+02 0.004 29.0 9.9 115 273-406 109-227 (252)
261 3kts_A Glycerol uptake operon 43.9 23 0.00077 32.7 4.5 127 268-409 17-182 (192)
262 2v5j_A 2,4-dihydroxyhept-2-ENE 43.7 1.4E+02 0.0046 28.8 10.4 88 298-406 30-118 (287)
263 2ojp_A DHDPS, dihydrodipicolin 43.6 1.3E+02 0.0046 28.7 10.4 97 271-371 26-133 (292)
264 3zwt_A Dihydroorotate dehydrog 43.5 63 0.0022 32.4 8.2 98 263-365 229-353 (367)
265 3ks6_A Glycerophosphoryl diest 43.0 71 0.0024 29.7 8.0 54 354-427 193-246 (250)
266 3l55_A B-1,4-endoglucanase/cel 42.9 42 0.0014 33.3 6.7 58 108-168 49-114 (353)
267 3sgz_A Hydroxyacid oxidase 2; 42.9 1.5E+02 0.005 29.7 10.7 31 365-407 272-302 (352)
268 3sgz_A Hydroxyacid oxidase 2; 42.9 40 0.0014 33.8 6.6 67 271-341 229-305 (352)
269 3qze_A DHDPS, dihydrodipicolin 42.7 1.2E+02 0.0043 29.4 10.1 90 331-430 58-149 (314)
270 2nli_A Lactate oxidase; flavoe 42.6 40 0.0014 33.8 6.6 65 271-339 241-315 (368)
271 2nzl_A Hydroxyacid oxidase 1; 42.0 1E+02 0.0035 31.1 9.5 94 292-407 241-337 (392)
272 1gox_A (S)-2-hydroxy-acid oxid 41.8 46 0.0016 33.2 6.9 65 271-339 237-311 (370)
273 3ffs_A Inosine-5-monophosphate 41.7 25 0.00086 35.9 4.9 43 105-149 139-181 (400)
274 3b0p_A TRNA-dihydrouridine syn 41.5 2.4E+02 0.0083 27.6 12.1 122 271-407 74-226 (350)
275 2wkj_A N-acetylneuraminate lya 41.3 1.8E+02 0.0063 27.9 11.0 89 331-430 46-137 (303)
276 3ayr_A Endoglucanase; TIM barr 41.2 66 0.0022 31.7 7.9 56 112-167 63-125 (376)
277 1yx1_A Hypothetical protein PA 41.1 1.8E+02 0.006 26.5 10.4 138 271-422 27-181 (264)
278 3daq_A DHDPS, dihydrodipicolin 40.8 1.9E+02 0.0065 27.6 10.9 90 331-431 37-129 (292)
279 1h1n_A Endo type cellulase ENG 40.6 20 0.00068 34.3 3.9 21 113-133 33-53 (305)
280 3q94_A Fructose-bisphosphate a 40.0 88 0.003 30.5 8.3 117 295-415 67-188 (288)
281 2zbt_A Pyridoxal biosynthesis 39.9 53 0.0018 31.3 6.7 140 270-427 90-259 (297)
282 2ehh_A DHDPS, dihydrodipicolin 39.1 1.6E+02 0.0054 28.2 10.1 57 365-430 69-126 (294)
283 1f6k_A N-acetylneuraminate lya 38.9 1.7E+02 0.0059 27.9 10.3 95 325-430 31-130 (293)
284 3bo9_A Putative nitroalkan dio 38.9 2.8E+02 0.0095 26.8 14.7 144 251-427 23-173 (326)
285 3dz1_A Dihydrodipicolinate syn 38.8 1.5E+02 0.005 28.8 9.9 84 331-430 43-132 (313)
286 3h43_A Proteasome-activating n 38.8 59 0.002 25.9 5.7 59 164-229 13-74 (85)
287 3sr7_A Isopentenyl-diphosphate 38.6 98 0.0034 31.1 8.7 42 389-432 290-336 (365)
288 3a5f_A Dihydrodipicolinate syn 38.6 1.3E+02 0.0044 28.8 9.3 70 271-340 26-106 (291)
289 1yxy_A Putative N-acetylmannos 38.6 1.3E+02 0.0043 27.3 8.9 118 263-407 29-163 (234)
290 3iwp_A Copper homeostasis prot 38.5 2.2E+02 0.0076 27.7 10.9 120 271-408 115-240 (287)
291 2b7n_A Probable nicotinate-nuc 38.4 55 0.0019 31.4 6.6 63 271-338 193-258 (273)
292 1eye_A DHPS 1, dihydropteroate 38.4 54 0.0019 31.7 6.6 68 99-170 4-92 (280)
293 2yci_X 5-methyltetrahydrofolat 38.4 37 0.0013 32.7 5.3 53 115-170 38-90 (271)
294 1mdl_A Mandelate racemase; iso 38.2 72 0.0025 31.2 7.6 60 100-165 133-196 (359)
295 1h5y_A HISF; histidine biosynt 38.2 80 0.0027 28.4 7.5 86 271-368 158-251 (253)
296 2r8w_A AGR_C_1641P; APC7498, d 38.1 1.7E+02 0.0058 28.7 10.2 90 331-430 69-160 (332)
297 3lmz_A Putative sugar isomeras 38.1 2E+02 0.0068 26.0 10.3 89 271-370 34-131 (257)
298 1xky_A Dihydrodipicolinate syn 38.0 1.6E+02 0.0056 28.3 10.0 57 365-430 81-138 (301)
299 1tv5_A Dhodehase, dihydroorota 37.9 50 0.0017 34.1 6.6 98 265-366 308-429 (443)
300 1f76_A Dihydroorotate dehydrog 37.8 66 0.0022 31.3 7.2 74 265-341 222-322 (336)
301 1xg4_A Probable methylisocitra 37.6 83 0.0028 30.7 7.8 104 269-392 169-275 (295)
302 3kru_A NADH:flavin oxidoreduct 37.6 3.1E+02 0.011 27.0 12.1 128 264-406 132-307 (343)
303 3oix_A Putative dihydroorotate 37.2 2.5E+02 0.0087 27.7 11.4 41 356-408 263-306 (345)
304 2yxg_A DHDPS, dihydrodipicolin 37.1 1.9E+02 0.0067 27.5 10.3 57 365-430 69-126 (289)
305 1vli_A Spore coat polysacchari 36.6 1.5E+02 0.0052 30.1 9.7 55 331-405 135-191 (385)
306 3cpr_A Dihydrodipicolinate syn 36.5 2E+02 0.0067 27.7 10.3 90 331-430 51-142 (304)
307 2cks_A Endoglucanase E-5; carb 36.5 58 0.002 30.9 6.4 52 113-167 44-102 (306)
308 3rcm_A TATD family hydrolase; 36.5 1.5E+02 0.0051 28.4 9.4 101 269-372 18-134 (287)
309 2vef_A Dihydropteroate synthas 36.3 93 0.0032 30.6 8.0 70 98-170 7-97 (314)
310 2wg5_A General control protein 36.3 1.2E+02 0.0042 25.0 7.6 60 164-230 32-94 (109)
311 1z41_A YQJM, probable NADH-dep 36.1 3.1E+02 0.011 26.6 14.7 128 264-408 133-309 (338)
312 2qkf_A 3-deoxy-D-manno-octulos 36.1 3E+02 0.01 26.4 11.5 105 295-424 75-186 (280)
313 1o60_A 2-dehydro-3-deoxyphosph 36.0 2.6E+02 0.009 27.0 11.1 105 295-424 78-189 (292)
314 1ece_A Endocellulase E1; glyco 35.8 32 0.0011 33.3 4.5 20 114-133 47-66 (358)
315 3tak_A DHDPS, dihydrodipicolin 35.7 2.3E+02 0.0078 27.0 10.6 89 331-430 36-127 (291)
316 3tsm_A IGPS, indole-3-glycerol 35.6 3E+02 0.01 26.3 12.8 101 276-407 88-197 (272)
317 1tx2_A DHPS, dihydropteroate s 35.6 90 0.0031 30.5 7.7 69 99-170 38-127 (297)
318 1nsj_A PRAI, phosphoribosyl an 35.2 75 0.0026 29.1 6.7 68 269-337 11-83 (205)
319 1vpz_A Carbon storage regulato 35.0 53 0.0018 25.8 4.7 32 208-240 14-45 (73)
320 2bti_A Carbon storage regulato 34.7 56 0.0019 24.9 4.7 30 211-241 7-36 (63)
321 1vhk_A Hypothetical protein YQ 34.4 2E+02 0.007 27.3 9.9 72 211-286 36-112 (268)
322 3l21_A DHDPS, dihydrodipicolin 34.3 2.4E+02 0.0081 27.2 10.5 87 331-430 50-141 (304)
323 3h8v_A Ubiquitin-like modifier 34.2 1.2E+02 0.004 29.5 8.3 66 296-371 92-168 (292)
324 3gr7_A NADPH dehydrogenase; fl 34.2 3.4E+02 0.012 26.5 13.9 129 264-407 133-308 (340)
325 1v5x_A PRA isomerase, phosphor 34.1 80 0.0027 29.0 6.7 68 269-337 10-82 (203)
326 2gjl_A Hypothetical protein PA 34.1 3.2E+02 0.011 26.2 15.4 129 253-410 14-149 (328)
327 2dpr_A CON-T(K7GLA); conantoxi 34.0 29 0.001 21.3 2.4 17 137-153 2-18 (26)
328 3tr9_A Dihydropteroate synthas 33.9 2.6E+02 0.0087 27.6 10.7 153 253-425 34-221 (314)
329 2d73_A Alpha-glucosidase SUSB; 33.9 2.5E+02 0.0084 31.0 11.4 102 266-370 370-506 (738)
330 1vr6_A Phospho-2-dehydro-3-deo 33.7 3.7E+02 0.013 26.8 14.4 110 271-405 124-246 (350)
331 3r2g_A Inosine 5'-monophosphat 33.4 38 0.0013 34.1 4.7 46 105-150 93-138 (361)
332 4adt_A Pyridoxine biosynthetic 33.2 2E+02 0.0067 28.0 9.7 102 291-427 66-172 (297)
333 3qvq_A Phosphodiesterase OLEI0 33.1 80 0.0027 29.3 6.7 103 282-424 145-249 (252)
334 1p4c_A L(+)-mandelate dehydrog 33.0 1.7E+02 0.0059 29.2 9.5 94 292-408 214-309 (380)
335 2jep_A Xyloglucanase; family 5 32.9 49 0.0017 32.6 5.4 54 112-168 70-133 (395)
336 2rfg_A Dihydrodipicolinate syn 32.9 1.8E+02 0.0062 27.9 9.3 89 331-430 35-126 (297)
337 3b4u_A Dihydrodipicolinate syn 32.8 1.6E+02 0.0055 28.2 9.0 86 331-429 38-129 (294)
338 3o1n_A 3-dehydroquinate dehydr 32.7 3.3E+02 0.011 25.9 12.4 140 271-427 56-214 (276)
339 1kbi_A Cytochrome B2, L-LCR; f 32.7 66 0.0022 33.8 6.5 68 270-341 354-436 (511)
340 1o5k_A DHDPS, dihydrodipicolin 32.5 1.6E+02 0.0056 28.4 9.0 56 365-429 81-137 (306)
341 1jw9_B Molybdopterin biosynthe 32.4 1.5E+02 0.0052 27.5 8.5 65 296-371 88-152 (249)
342 2whl_A Beta-mannanase, baman5; 32.4 52 0.0018 31.0 5.3 52 113-168 33-87 (294)
343 2jpp_A Translational repressor 32.1 64 0.0022 25.1 4.7 29 211-240 5-33 (70)
344 3qc0_A Sugar isomerase; TIM ba 32.1 1.5E+02 0.0051 26.7 8.3 148 271-423 22-195 (275)
345 1i60_A IOLI protein; beta barr 32.1 2.8E+02 0.0095 24.8 11.4 121 271-396 18-164 (278)
346 3nco_A Endoglucanase fncel5A; 32.0 92 0.0032 29.6 7.1 52 113-167 43-104 (320)
347 2v9d_A YAGE; dihydrodipicolini 32.0 1.9E+02 0.0064 28.6 9.4 57 365-430 100-157 (343)
348 3ceu_A Thiamine phosphate pyro 32.0 95 0.0032 28.0 6.8 68 269-339 97-174 (210)
349 1kzl_A Riboflavin synthase; bi 31.9 64 0.0022 30.1 5.6 54 201-256 25-85 (208)
350 2ojp_A DHDPS, dihydrodipicolin 31.9 1.4E+02 0.0048 28.5 8.4 56 365-429 70-126 (292)
351 1thf_D HISF protein; thermophI 31.8 1.5E+02 0.005 27.1 8.2 64 274-342 37-108 (253)
352 3bdk_A D-mannonate dehydratase 31.8 1.1E+02 0.0039 30.8 8.0 153 268-422 31-276 (386)
353 3ih1_A Methylisocitrate lyase; 31.8 1.7E+02 0.0058 28.6 9.0 79 306-405 157-242 (305)
354 1to3_A Putative aldolase YIHT; 31.8 1.5E+02 0.0052 28.7 8.6 75 273-348 183-265 (304)
355 1i8d_A Riboflavin synthase; ri 31.8 1.1E+02 0.0037 28.6 7.2 54 201-256 24-85 (213)
356 1w3i_A EDA, 2-keto-3-deoxy glu 31.7 2.6E+02 0.009 26.6 10.3 96 271-371 24-129 (293)
357 2ovl_A Putative racemase; stru 31.5 74 0.0025 31.4 6.4 62 100-165 133-198 (371)
358 1viz_A PCRB protein homolog; s 31.4 65 0.0022 30.5 5.7 51 100-152 7-59 (240)
359 1x1o_A Nicotinate-nucleotide p 31.2 72 0.0025 31.0 6.1 62 269-338 205-269 (286)
360 2vc6_A MOSA, dihydrodipicolina 31.0 1.7E+02 0.006 27.9 8.9 57 365-430 69-126 (292)
361 1o66_A 3-methyl-2-oxobutanoate 30.9 1.1E+02 0.0037 29.7 7.2 72 331-407 38-116 (275)
362 1jub_A Dihydroorotate dehydrog 30.8 97 0.0033 29.6 7.0 96 266-366 170-298 (311)
363 2fli_A Ribulose-phosphate 3-ep 30.7 2.8E+02 0.0096 24.5 11.4 109 270-405 19-137 (220)
364 1rvk_A Isomerase/lactonizing e 30.7 1.1E+02 0.0039 30.0 7.7 46 116-165 156-207 (382)
365 3glc_A Aldolase LSRF; TIM barr 30.6 37 0.0013 33.2 3.9 65 272-343 194-263 (295)
366 1vc4_A Indole-3-glycerol phosp 30.6 1.1E+02 0.0036 29.0 7.1 64 271-338 165-237 (254)
367 1rqb_A Transcarboxylase 5S sub 30.5 5E+02 0.017 27.3 14.4 150 264-429 43-217 (539)
368 1ceo_A Cellulase CELC; glycosy 30.4 69 0.0023 30.7 5.8 22 112-133 29-50 (343)
369 3o1n_A 3-dehydroquinate dehydr 30.3 3.6E+02 0.012 25.7 12.8 146 265-428 116-275 (276)
370 4h3d_A 3-dehydroquinate dehydr 30.2 3.5E+02 0.012 25.4 13.2 150 261-427 25-194 (258)
371 3si9_A DHDPS, dihydrodipicolin 30.2 2.2E+02 0.0075 27.6 9.5 57 365-430 91-148 (315)
372 3stp_A Galactonate dehydratase 30.2 81 0.0028 32.0 6.6 64 100-165 167-237 (412)
373 3r8r_A Transaldolase; pentose 30.1 61 0.0021 30.3 5.1 56 276-337 119-186 (212)
374 3gka_A N-ethylmaleimide reduct 30.1 4.2E+02 0.014 26.3 12.8 26 264-289 150-183 (361)
375 1nu5_A Chloromuconate cycloiso 30.0 96 0.0033 30.4 7.0 46 116-165 149-195 (370)
376 3pr9_A FKBP-type peptidyl-prol 30.0 94 0.0032 27.3 6.2 59 179-239 62-128 (157)
377 2yw3_A 4-hydroxy-2-oxoglutarat 29.9 2E+02 0.0067 26.1 8.6 107 271-413 74-186 (207)
378 1ypf_A GMP reductase; GUAC, pu 29.8 48 0.0016 32.6 4.6 46 105-150 99-146 (336)
379 3s1x_A Probable transaldolase; 29.7 83 0.0028 29.6 6.0 61 275-341 120-192 (223)
380 4djd_C C/Fe-SP, corrinoid/iron 29.6 1.6E+02 0.0056 30.4 8.7 124 268-407 163-295 (446)
381 3aof_A Endoglucanase; glycosyl 29.6 80 0.0027 29.8 6.1 51 113-167 35-96 (317)
382 3sz8_A 2-dehydro-3-deoxyphosph 29.6 2.3E+02 0.008 27.5 9.4 90 293-406 78-168 (285)
383 1zud_1 Adenylyltransferase THI 29.4 1.9E+02 0.0065 26.8 8.7 65 296-371 85-149 (251)
384 2isw_A Putative fructose-1,6-b 29.4 1.9E+02 0.0067 28.6 8.9 131 293-429 60-203 (323)
385 1zcc_A Glycerophosphodiester p 29.2 1.4E+02 0.0049 27.5 7.7 57 350-426 178-236 (248)
386 3na8_A Putative dihydrodipicol 29.2 2E+02 0.007 27.9 9.1 57 365-430 93-150 (315)
387 2yyu_A Orotidine 5'-phosphate 29.2 20 0.00068 33.7 1.7 36 392-427 201-236 (246)
388 2g0w_A LMO2234 protein; putati 29.2 3.2E+02 0.011 25.3 10.2 38 271-308 40-83 (296)
389 3ddy_A Lumazine protein, LUMP; 29.1 1.4E+02 0.0049 27.2 7.4 55 200-256 23-84 (186)
390 1ix5_A FKBP; ppiase, isomerase 29.1 44 0.0015 29.1 3.8 58 180-239 64-129 (151)
391 3ceu_A Thiamine phosphate pyro 28.9 1.8E+02 0.0062 26.1 8.2 95 270-407 16-115 (210)
392 2gdq_A YITF; mandelate racemas 28.9 1.5E+02 0.0053 29.2 8.3 46 116-165 146-191 (382)
393 3fkr_A L-2-keto-3-deoxyarabona 28.8 2.7E+02 0.0094 26.8 9.9 56 365-430 77-137 (309)
394 2aam_A Hypothetical protein TM 28.8 1.4E+02 0.0049 29.2 7.8 93 273-371 128-246 (309)
395 1ivn_A Thioesterase I; hydrola 28.7 50 0.0017 28.3 4.2 42 331-372 63-106 (190)
396 4dbe_A Orotidine 5'-phosphate 28.6 2.2E+02 0.0076 26.2 8.8 123 282-428 80-209 (222)
397 2e6z_A Transcription elongatio 28.4 51 0.0017 24.3 3.5 46 211-259 7-55 (59)
398 1rd5_A Tryptophan synthase alp 28.2 3.5E+02 0.012 24.9 10.3 114 276-406 114-230 (262)
399 1ea0_A Glutamate synthase [NAD 28.2 3.5E+02 0.012 32.3 12.0 142 277-431 959-1148(1479)
400 3fij_A LIN1909 protein; 11172J 28.0 1.2E+02 0.004 28.3 6.9 64 302-369 37-112 (254)
401 1tkk_A Similar to chloromucona 27.9 1.2E+02 0.0042 29.6 7.3 46 116-165 147-192 (366)
402 1zzm_A Putative deoxyribonucle 27.8 2.8E+02 0.0097 24.9 9.5 98 271-372 23-134 (259)
403 1y8q_A Ubiquitin-like 1 activa 27.6 1.9E+02 0.0063 28.5 8.6 65 295-371 92-156 (346)
404 3hgj_A Chromate reductase; TIM 27.6 2E+02 0.0067 28.3 8.7 71 266-342 237-323 (349)
405 3ip3_A Oxidoreductase, putativ 27.6 1.3E+02 0.0046 28.8 7.4 121 278-429 22-145 (337)
406 3lye_A Oxaloacetate acetyl hyd 27.5 3.7E+02 0.013 26.2 10.6 82 303-405 157-246 (307)
407 3cny_A Inositol catabolism pro 27.4 1.6E+02 0.0056 26.9 7.8 119 271-396 35-180 (301)
408 7a3h_A Endoglucanase; hydrolas 27.3 82 0.0028 30.0 5.7 53 111-167 43-102 (303)
409 1ydy_A Glycerophosphoryl diest 27.2 1.5E+02 0.0053 28.9 7.9 125 282-422 204-355 (356)
410 3d0c_A Dihydrodipicolinate syn 27.1 1.7E+02 0.0059 28.3 8.1 46 385-430 91-137 (314)
411 1y0e_A Putative N-acetylmannos 27.1 3.3E+02 0.011 24.1 15.3 138 263-428 18-173 (223)
412 3ngf_A AP endonuclease, family 27.1 1.9E+02 0.0065 26.3 8.1 143 271-422 27-203 (269)
413 1oy0_A Ketopantoate hydroxymet 27.0 89 0.0031 30.4 5.9 72 331-407 55-134 (281)
414 1tzz_A Hypothetical protein L1 27.0 1.2E+02 0.0042 30.0 7.2 45 117-165 173-217 (392)
415 3fok_A Uncharacterized protein 27.0 2.8E+02 0.0096 27.3 9.5 62 354-427 229-296 (307)
416 3vup_A Beta-1,4-mannanase; TIM 26.9 70 0.0024 29.3 5.0 49 114-165 45-110 (351)
417 1bqc_A Protein (beta-mannanase 26.9 91 0.0031 29.4 5.9 46 115-167 36-87 (302)
418 3l12_A Putative glycerophospho 26.8 1E+02 0.0036 29.5 6.5 51 354-424 257-307 (313)
419 3l0g_A Nicotinate-nucleotide p 26.7 59 0.002 32.0 4.6 68 270-345 217-294 (300)
420 1ofd_A Ferredoxin-dependent gl 26.6 4.9E+02 0.017 31.2 12.9 143 276-431 993-1183(1520)
421 1v8a_A Hydroxyethylthiazole ki 26.6 79 0.0027 29.9 5.4 47 321-372 47-93 (265)
422 4dpp_A DHDPS 2, dihydrodipicol 26.5 1.3E+02 0.0045 30.1 7.3 69 271-339 84-163 (360)
423 3tqv_A Nicotinate-nucleotide p 26.2 66 0.0023 31.4 4.8 60 270-337 208-270 (287)
424 4had_A Probable oxidoreductase 26.2 89 0.003 30.0 5.8 86 320-428 74-161 (350)
425 3fs2_A 2-dehydro-3-deoxyphosph 26.1 2.2E+02 0.0076 27.8 8.6 90 293-406 99-189 (298)
426 3if2_A Aminotransferase; YP_26 26.0 1.1E+02 0.0036 30.1 6.5 51 103-154 368-440 (444)
427 1vcf_A Isopentenyl-diphosphate 25.8 1.5E+02 0.0051 28.8 7.4 55 365-431 256-312 (332)
428 2zbt_A Pyridoxal biosynthesis 25.8 1.9E+02 0.0066 27.3 8.1 32 392-424 138-169 (297)
429 2osx_A Endoglycoceramidase II; 25.7 86 0.0029 32.0 5.9 52 111-166 65-126 (481)
430 1g01_A Endoglucanase; alpha/be 25.7 88 0.003 30.6 5.8 52 113-168 55-113 (364)
431 1h4p_A Glucan 1,3-beta-glucosi 25.6 81 0.0028 31.7 5.6 52 113-167 75-136 (408)
432 2jbm_A Nicotinate-nucleotide p 25.5 1.3E+02 0.0044 29.3 6.8 63 271-338 208-273 (299)
433 4ew6_A D-galactose-1-dehydroge 25.4 1.7E+02 0.0058 28.2 7.7 85 320-428 68-156 (330)
434 4e8b_A Ribosomal RNA small sub 25.0 1.6E+02 0.0055 27.7 7.3 72 211-286 33-109 (251)
435 3pzt_A Endoglucanase; alpha/be 24.9 91 0.0031 30.2 5.6 53 111-167 68-127 (327)
436 2qdd_A Mandelate racemase/muco 24.9 1.5E+02 0.0051 29.2 7.3 60 100-165 134-197 (378)
437 3n9k_A Glucan 1,3-beta-glucosi 24.8 68 0.0023 32.5 4.8 51 113-166 75-134 (399)
438 3vkj_A Isopentenyl-diphosphate 24.8 1.3E+02 0.0043 30.2 6.7 54 365-432 267-324 (368)
439 3u3x_A Oxidoreductase; structu 24.8 1.4E+02 0.0049 29.0 7.1 87 320-428 76-164 (361)
440 3ijd_A Uncharacterized protein 24.7 1.8E+02 0.006 28.7 7.7 115 268-391 166-293 (315)
441 3g0t_A Putative aminotransfera 24.5 95 0.0032 30.2 5.7 50 103-153 374-436 (437)
442 4e2u_A PHO RADA intein; HINT-f 24.5 1.4E+02 0.0049 26.1 6.4 39 179-223 83-125 (168)
443 2q02_A Putative cytoplasmic pr 24.5 3.8E+02 0.013 23.9 12.0 120 271-396 23-161 (272)
444 3tml_A 2-dehydro-3-deoxyphosph 24.4 2.3E+02 0.0079 27.5 8.3 84 293-400 75-159 (288)
445 3oru_A DUF1989 family protein; 24.4 1.2E+02 0.004 28.8 6.0 55 178-232 46-114 (234)
446 1pii_A N-(5'phosphoribosyl)ant 24.2 6E+02 0.02 26.1 12.6 111 269-407 69-185 (452)
447 2oz8_A MLL7089 protein; struct 24.1 1.4E+02 0.0047 29.7 6.9 62 100-165 132-197 (389)
448 3dzv_A 4-methyl-5-(beta-hydrox 23.9 1E+02 0.0035 29.6 5.7 47 320-371 48-94 (273)
449 3kw2_A Probable R-RNA methyltr 23.9 1.9E+02 0.0064 27.4 7.5 73 211-286 32-109 (257)
450 3jug_A Beta-mannanase; TIM-bar 23.9 72 0.0025 31.6 4.7 50 115-168 58-110 (345)
451 4fb5_A Probable oxidoreductase 23.9 1.1E+02 0.0038 29.4 6.1 86 320-428 82-169 (393)
452 2qiw_A PEP phosphonomutase; st 23.9 4.6E+02 0.016 24.7 11.4 139 264-405 24-187 (255)
453 2bdq_A Copper homeostasis prot 23.7 3.8E+02 0.013 25.1 9.4 72 361-448 50-129 (224)
454 3g7q_A Valine-pyruvate aminotr 23.6 1.3E+02 0.0045 28.9 6.5 50 103-153 342-412 (417)
455 2vws_A YFAU, 2-keto-3-deoxy su 23.6 3.2E+02 0.011 25.7 9.1 87 298-406 9-97 (267)
456 2kct_A Cytochrome C-type bioge 23.4 1.8E+02 0.006 23.7 6.2 55 166-220 7-65 (94)
457 1zco_A 2-dehydro-3-deoxyphosph 23.3 1.2E+02 0.0039 29.0 5.9 117 269-405 96-226 (262)
458 4ab4_A Xenobiotic reductase B; 23.2 5.5E+02 0.019 25.4 13.1 26 264-289 142-175 (362)
459 3apt_A Methylenetetrahydrofola 23.2 1.3E+02 0.0046 29.2 6.4 62 268-329 161-222 (310)
460 2rdx_A Mandelate racemase/muco 23.1 1.4E+02 0.0049 29.3 6.8 61 100-165 134-196 (379)
461 1dxe_A 2-dehydro-3-deoxy-galac 23.1 3.3E+02 0.011 25.3 9.1 88 298-406 10-98 (256)
462 1uuq_A Mannosyl-oligosaccharid 23.0 1.5E+02 0.0052 29.7 7.1 20 114-133 65-84 (440)
463 2uv8_G Fatty acid synthase sub 22.9 1.2E+02 0.0042 37.3 7.2 122 268-405 661-801 (2051)
464 3b8i_A PA4872 oxaloacetate dec 22.9 1.2E+02 0.004 29.5 5.9 63 268-336 169-233 (287)
465 1vjz_A Endoglucanase; TM1752, 22.8 1.1E+02 0.0038 29.3 5.7 23 111-133 36-58 (341)
466 1rh9_A Endo-beta-mannanase; en 22.7 1.7E+02 0.0059 28.1 7.2 50 114-166 45-106 (373)
467 3fst_A 5,10-methylenetetrahydr 22.7 1.2E+02 0.0041 29.6 6.0 61 267-327 163-223 (304)
468 3no3_A Glycerophosphodiester p 22.6 1.3E+02 0.0046 27.6 6.1 50 355-424 186-235 (238)
469 1o94_A Tmadh, trimethylamine d 22.5 7.3E+02 0.025 26.5 12.9 132 264-407 138-322 (729)
470 3ajx_A 3-hexulose-6-phosphate 22.4 3.9E+02 0.013 23.3 13.4 129 271-427 17-156 (207)
471 3qr3_A Endoglucanase EG-II; TI 22.0 40 0.0014 33.3 2.4 53 113-168 45-107 (340)
472 1i4n_A Indole-3-glycerol phosp 22.0 4.6E+02 0.016 24.7 9.8 114 266-407 59-179 (251)
473 3tva_A Xylose isomerase domain 22.0 4.5E+02 0.015 23.9 12.7 140 272-422 26-203 (290)
474 3m2t_A Probable dehydrogenase; 22.0 1.9E+02 0.0066 28.0 7.4 59 320-397 56-116 (359)
475 4hci_A Cupredoxin 1; structura 21.9 1.3E+02 0.0044 23.6 5.1 40 177-216 28-67 (100)
476 2qul_A D-tagatose 3-epimerase; 21.9 3.8E+02 0.013 24.2 9.2 144 271-421 21-202 (290)
477 1z85_A Hypothetical protein TM 21.8 2.1E+02 0.0071 26.8 7.2 72 211-286 40-116 (234)
478 3hpd_A Hydroxyethylthiazole ki 21.8 1.1E+02 0.0037 29.4 5.3 46 320-370 46-91 (265)
479 2rdx_A Mandelate racemase/muco 21.7 3.8E+02 0.013 26.2 9.6 91 266-371 201-294 (379)
480 2z0t_A Putative uncharacterize 21.6 66 0.0023 26.9 3.3 30 202-232 25-54 (109)
481 3a24_A Alpha-galactosidase; gl 21.5 3.8E+02 0.013 29.0 10.1 99 266-385 308-430 (641)
482 2r91_A 2-keto-3-deoxy-(6-phosp 21.2 5.2E+02 0.018 24.3 12.9 95 271-371 23-128 (286)
483 3dty_A Oxidoreductase, GFO/IDH 21.1 1.7E+02 0.0056 28.9 6.8 88 319-429 67-161 (398)
484 1zmr_A Phosphoglycerate kinase 21.1 51 0.0017 33.6 2.9 99 101-223 35-140 (387)
485 2c6q_A GMP reductase 2; TIM ba 21.1 1E+02 0.0035 30.6 5.2 48 103-150 109-158 (351)
486 2r2n_A Kynurenine/alpha-aminoa 20.8 1.8E+02 0.0062 28.3 7.0 51 103-153 356-423 (425)
487 2c0h_A Mannan endo-1,4-beta-ma 20.8 1.1E+02 0.0037 29.1 5.2 20 114-133 48-67 (353)
488 2nuw_A 2-keto-3-deoxygluconate 20.7 5.4E+02 0.018 24.3 12.5 96 271-371 24-129 (288)
489 3hp4_A GDSL-esterase; psychrot 20.6 41 0.0014 28.5 1.9 53 320-372 54-110 (185)
490 3e9m_A Oxidoreductase, GFO/IDH 20.5 1.7E+02 0.0058 28.0 6.6 86 320-428 55-142 (330)
491 2y5s_A DHPS, dihydropteroate s 20.5 1.4E+02 0.0048 29.0 5.9 52 115-170 50-109 (294)
492 2p4v_A Transcription elongatio 20.5 2.6E+02 0.009 24.4 7.2 84 144-233 59-154 (158)
493 3kux_A Putative oxidoreductase 20.4 1.3E+02 0.0044 29.1 5.7 86 320-429 55-143 (352)
494 3prb_A FKBP-type peptidyl-prol 20.4 2E+02 0.0067 27.0 6.7 59 179-239 62-128 (231)
495 3sjn_A Mandelate racemase/muco 20.3 2.1E+02 0.0072 28.2 7.4 48 114-165 151-200 (374)
496 3s9z_A Malate synthase G; inhi 20.2 1.3E+02 0.0045 33.0 6.0 51 281-331 392-449 (741)
497 2gl5_A Putative dehydratase pr 20.2 2.3E+02 0.0078 28.2 7.6 50 116-166 157-226 (410)
498 2e7c_A Myosin-binding protein 20.2 2.1E+02 0.0071 22.2 6.0 77 166-244 20-101 (118)
499 3tr2_A Orotidine 5'-phosphate 20.2 4.8E+02 0.017 24.2 9.5 34 392-425 202-235 (239)
500 3di4_A Uncharacterized protein 20.1 2.1E+02 0.007 28.0 6.9 55 178-232 60-129 (286)
No 1
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ...
Probab=100.00 E-value=4.8e-108 Score=869.06 Aligned_cols=349 Identities=43% Similarity=0.681 Sum_probs=337.1
Q ss_pred ccCCCCCCCCcEEEEecCCCCCCHHHHHHHHHhCCcEEEeecCCCChHHHHHHHHHHHHHHhh------cCCCcEEEEee
Q 012943 91 GVVGPNARRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQ------FEDKAVAIMLD 164 (453)
Q Consensus 91 ~~~~~~~~r~TKIi~TiGPss~s~e~i~~Li~aGmnvaRiNfSHg~~e~~~~~I~~iR~a~~~------~~~~~iaIllD 164 (453)
+.++|..+|||||||||||+|+++|+|++|+++||||||||||||++++|+++|+++|++.++ ++ +||+||+|
T Consensus 54 ~~~~~~~~rkTKIV~TiGPas~~~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~~iR~a~~~~~~~~~~~-~~vaIllD 132 (550)
T 3gr4_A 54 IDSPPITARNTGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILY-RPVAVALD 132 (550)
T ss_dssp TTSCCCSCCCSEEEEECSTTTCSHHHHHHHHHHTCCEEEEETTSSCHHHHHHHHHHHHHHHHTTTTCTTTC-CCCEEEEE
T ss_pred CCCCCccCCCceEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHhhccccccC-ceEEEEEe
Confidence 566778899999999999999999999999999999999999999999999999999999998 66 99999999
Q ss_pred cCCCeeeecCCCC----ceeecCCCEEEEEeecC---CCCccEEEecccccccccccCCEEEEeCCeeEEEEEEEeCCeE
Q 012943 165 TKGPEVRSGDVPQ----PIILKEGQEFNFTIKRG---VSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLV 237 (453)
Q Consensus 165 LkGPkIRtG~l~~----~i~L~~G~~v~lt~~~~---~~~~~~I~v~~~~l~~~vk~Gd~IlIDDG~I~L~V~ev~~~~v 237 (453)
|||||||||.+.+ ++.|++||+|+|+++.. .++.+.|+++|++|+++|++||+||+|||+|.|+|++++++.+
T Consensus 133 lkGPkIR~G~~~~~~~~~v~L~~G~~~~lt~~~~~~~~g~~~~i~v~y~~l~~~v~~Gd~IlidDG~i~l~V~~v~~~~v 212 (550)
T 3gr4_A 133 TKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVKQKGADFL 212 (550)
T ss_dssp CCCSCCBBCCBTTBTTCCEEECTTCEEEEECCGGGTTCBCSSEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEECSSEE
T ss_pred CCCCEEEEEecCCCCCCCeEEcCCCEEEEEeCCcccCCCCccEEecchHHHHhhcCCCCEEEEeCCEEEEEEEEEeCCEE
Confidence 9999999999953 79999999999998753 5788899999999999999999999999999999999999999
Q ss_pred EEEEeeCcEecccceeecCCCccCCCCCCHhhHHHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecC
Q 012943 238 KCIVVDGGELKSRRHLNVRGKSANLPSITDKDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIES 317 (453)
Q Consensus 238 ~~~V~ngG~L~s~KgVnlp~~~~~lp~ltekD~~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET 317 (453)
.|+|+|||.|+++||||+||+.+++|.||+||++||+|++++|+|+|++|||++++|+.+++++|++.|.++.|||||||
T Consensus 213 ~~~V~~gG~L~s~KgvNlPg~~l~lpalTekD~~dl~f~~~~~vD~ia~SfVr~a~Dv~~~r~~L~~~g~~i~IIAKIE~ 292 (550)
T 3gr4_A 213 VTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKASDVHEVRKVLGEKGKNIKIISKIEN 292 (550)
T ss_dssp EEEEEECEEECSSCBEECTTSCCCCCSSCHHHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHHTTTTTTSEEEEEECS
T ss_pred EEEEEeCcEEcCCceeecCCCccCCCCCCHHHHHHHHHHHHcCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999989999999999
Q ss_pred hhhhccHHHHHhhcCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHH
Q 012943 318 ADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVR 397 (453)
Q Consensus 318 ~~gv~NldeI~~~sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~ 397 (453)
++||+|++||++++|||||||||||+|+|+++|+.+|++|+++|+++|||||+||||||||+++|.|||||++||||||.
T Consensus 293 ~eav~nldeIl~~sDgImVaRGDLgvei~~e~vp~~Qk~iI~~c~~agkpVi~ATQMLeSMi~~p~PTRAEvsDVanAvl 372 (550)
T 3gr4_A 293 HEGVRRFDEILEASDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVL 372 (550)
T ss_dssp HHHHHTHHHHHHHSSEEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSTTGGGGTCSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCEEEEccchhcccCCHHHHHHHHHHHHHHHHHhCCCEEEEehhhHHhhcCCCccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCccEEEecCcccCCCCHHHHHHHHHHHHHHHhcCCCCCCCcc
Q 012943 398 EGADAVMLSGETAHGKFPLKAVKVMHTVALRTESSLPVSITPP 440 (453)
Q Consensus 398 ~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE~~~~~~~~~~ 440 (453)
||+||+|||+|||.|+||+|||++|++||++||+.++|.+.+.
T Consensus 373 dG~DavMLSgETA~G~yPveaV~~M~~I~~~aE~~~~~~~~~~ 415 (550)
T 3gr4_A 373 DGADCIMLSGETAKGDYPLEAVRMQHLIAREAEAAIYHLQLFE 415 (550)
T ss_dssp HTCSEEEESHHHHTCSCHHHHHHHHHHHHHHHHHTSCHHHHHH
T ss_pred cCCcEEEEecCccCCCCHHHHHHHHHHHHHHHhhcchhHHHHH
Confidence 9999999999999999999999999999999999887755543
No 2
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=2e-108 Score=867.27 Aligned_cols=343 Identities=37% Similarity=0.619 Sum_probs=321.7
Q ss_pred CCCCCcEEEEecCCCCCCHHHHHHHHHhCCcEEEeecCCCChHHHHHHHHHHHHHHh-hcCCCcEEEEeecCCCeeeecC
Q 012943 96 NARRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNS-QFEDKAVAIMLDTKGPEVRSGD 174 (453)
Q Consensus 96 ~~~r~TKIi~TiGPss~s~e~i~~Li~aGmnvaRiNfSHg~~e~~~~~I~~iR~a~~-~~~~~~iaIllDLkGPkIRtG~ 174 (453)
..+|||||||||||+|+++|+|++|+++||||||||||||++++|+++++++|++++ +++ +||+||+||||||||||.
T Consensus 43 ~~~rkTKIV~TiGPas~s~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~~iR~~~~~~~~-~~vaIllDl~GPkIR~G~ 121 (520)
T 3khd_A 43 LRSKKTHIVCTLGPACKSVETLVKLIDAGMDICRFNFSHGSHEDHKEMFNNVLKAQELRPN-CLLGMLLDTKGPEIRTGF 121 (520)
T ss_dssp GGGCSSEEEEECCGGGCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHCSS-CCCEEEEECCCCCEEBCE
T ss_pred ccCCCcEEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhcC-CceEEEEeCCCCeEEeec
Confidence 468999999999999999999999999999999999999999999999999999998 676 999999999999999999
Q ss_pred CCC-ceeecCCCEEEEEee-cCCCCccEEEecccccccccccCCEEEEeCCeeEEEEEEEeCCeEEEEEeeCcEecccce
Q 012943 175 VPQ-PIILKEGQEFNFTIK-RGVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVVDGGELKSRRH 252 (453)
Q Consensus 175 l~~-~i~L~~G~~v~lt~~-~~~~~~~~I~v~~~~l~~~vk~Gd~IlIDDG~I~L~V~ev~~~~v~~~V~ngG~L~s~Kg 252 (453)
+.+ ++.|++||+|+|+++ ...++.+.|+++|++|+++|++||+||+|||+|.|+|++++++.+.|+|++||.|+++||
T Consensus 122 ~~~~~~~L~~G~~~~lt~~~~~~g~~~~i~v~y~~l~~~v~~G~~IlidDG~i~l~V~~~~~~~v~~~V~~gG~L~~~Kg 201 (520)
T 3khd_A 122 LKNKEVHLKEGSKLKLVTDYEFLGDETCIACSYKKLPQSVKPGNIILIADGSVSCKVLETHEDHVITEVLNSAVIGERKN 201 (520)
T ss_dssp EC-----------CEEESCTTCEECTTEEEBSCTTHHHHCCC-CEEEETTTTEEEEEEEECSSCEEEEECC-CCCCSSCE
T ss_pred cCCCCeEecCCCEEEEecCCCcCCCccEEecccHHHHhhcCcCcEEEEeCCEEEEEEEEEECCEEEEEEEeCeEEeCCce
Confidence 965 579999999999988 556888899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCccCCCCCCHhhHHHH-HhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhhc
Q 012943 253 LNVRGKSANLPSITDKDWEDI-KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISAS 331 (453)
Q Consensus 253 Vnlp~~~~~lp~ltekD~~DI-~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~s 331 (453)
||+||+.+++|.||+||++|| +|++++|+|+|++|||++++||.+++++|++.|.++.|||||||++||+|++||++++
T Consensus 202 vNlPg~~~~lp~lTekD~~dl~~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~g~~i~IIAKIE~~eav~nldeIl~~s 281 (520)
T 3khd_A 202 MNLPNVKVDLPIISEKDKNDILNFAIPMGCNFIAASFIQSADDVRLIRNLLGPRGRHIKIIPKIENIEGIIHFDKILAES 281 (520)
T ss_dssp EECTTSCCCSCSSCHHHHHHHHHTHHHHTCCEEEETTCCSHHHHHHHHHHHTTTTTTSEEEEEECSHHHHHTHHHHHHHS
T ss_pred eecCCCcCCCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHhcCCCCcEEEEECCHHHHHhHHHHHHhC
Confidence 999999999999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccC
Q 012943 332 DGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAH 411 (453)
Q Consensus 332 DgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~ 411 (453)
|||||||||||+|+|+++|+.+||+|+++|+++|||||+||||||||+++|+|||||++||||||.||+||+|||+|||.
T Consensus 282 DGIMVARGDLgvEi~~e~vp~~Qk~iI~~c~~aGKPVi~ATQMLeSMi~~p~PTRAEvsDVanAVldGaDavMLSgETA~ 361 (520)
T 3khd_A 282 DGIMIARGDLGMEISPEKVFLAQKLMISKCNLQGKPIITATQMLESMTKNPRPTRAEVTDVANAVLDGTDCVMLSGETAG 361 (520)
T ss_dssp SCEEECHHHHTTTSCGGGHHHHHHHHHHHHHHHTCCEEECCCCCGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHS
T ss_pred CcEEEccccccccCCHHHHHHHHHHHHHHHHHcCCCeEEeehhhHHHhcCCCccHHHHHHHHHHHHhCCCEEEecccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCCCCCCc
Q 012943 412 GKFPLKAVKVMHTVALRTESSLPVSITP 439 (453)
Q Consensus 412 G~yP~eaV~~m~~I~~~aE~~~~~~~~~ 439 (453)
|+||+|||++|++||++||+.++|.+.+
T Consensus 362 G~yPveaV~~M~~I~~~aE~~~~~~~~~ 389 (520)
T 3khd_A 362 GKFPVEAVTIMSKICLEAEACIDYKLLY 389 (520)
T ss_dssp CSCHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred CcCHHHHHHHHHHHHHHHHhhhhhhhhH
Confidence 9999999999999999999988765444
No 3
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A*
Probab=100.00 E-value=6.6e-108 Score=861.55 Aligned_cols=344 Identities=41% Similarity=0.661 Sum_probs=332.3
Q ss_pred CCCCCCCcEEEEecCCCCCCHHHHHHHHHhCCcEEEeecCCCChHHHHHHHHHHHHHHhhcCCCcEEEEeecCCCeeeec
Q 012943 94 GPNARRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSG 173 (453)
Q Consensus 94 ~~~~~r~TKIi~TiGPss~s~e~i~~Li~aGmnvaRiNfSHg~~e~~~~~I~~iR~a~~~~~~~~iaIllDLkGPkIRtG 173 (453)
++..+|||||||||||+|+++|+|++|+++||||||||||||++++|+++++++|+++++++ +||+||+||||||||||
T Consensus 15 ~~~~~rkTKIv~TiGPas~~~e~l~~Li~aGmnv~RlNfSHG~~e~h~~~i~~iR~~~~~~g-~~vaIl~Dl~GPkIR~g 93 (499)
T 3hqn_D 15 PVANYRAARIICTIGPSTQSVEALKGLIQSGMSVARMNFSHGSHEYHQTTINNVRQAAAELG-VNIAIALDTKGPEIRTG 93 (499)
T ss_dssp CCCSSCCSEEEEECSTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHHT-CCCEEEEECCCCCCBBC
T ss_pred CcccCCCeEEEEEECCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhC-CcEEEEEeCCCCEEeee
Confidence 55678999999999999999999999999999999999999999999999999999999998 99999999999999999
Q ss_pred CCCC--ceeecCCCEEEEEeec---CCCCccEEEecccccccccccCCEEEEeCCeeEEEEEEEe-CCeEEEEEeeCcEe
Q 012943 174 DVPQ--PIILKEGQEFNFTIKR---GVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKT-KDLVKCIVVDGGEL 247 (453)
Q Consensus 174 ~l~~--~i~L~~G~~v~lt~~~---~~~~~~~I~v~~~~l~~~vk~Gd~IlIDDG~I~L~V~ev~-~~~v~~~V~ngG~L 247 (453)
.+.+ ++ |++||+|+|+++. ..++.+.++++|++|+++|++||+||+|||+|.|+|++++ ++.+.|+|+|||.|
T Consensus 94 ~~~~~~~v-L~~G~~~~lt~~~~~~~~g~~~~i~v~y~~l~~~v~~G~~ilidDG~i~l~V~~~~~~~~i~~~v~~gG~L 172 (499)
T 3hqn_D 94 QFVGGDAV-MERGATCYVTTDPAFADKGTKDKFYIDYQNLSKVVRPGNYIYIDDGILILQVQSHEDEQTLECTVTNSHTI 172 (499)
T ss_dssp CBGGGEEE-ECTTCEEEEECCGGGTTCBCSSEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEEEETTEEEEEECSCEEE
T ss_pred ccCCCCeE-EcCCCEEEEEecCcccCCCCCCEEecchHHHHhhcCCCCEEEEeCCEEEEEEEEEcCCCeEEEEEEeCcEe
Confidence 9975 47 9999999999873 4688889999999999999999999999999999999997 67899999999999
Q ss_pred cccceeecCCCccCCCCCCHhhHHHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHH
Q 012943 248 KSRRHLNVRGKSANLPSITDKDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSI 327 (453)
Q Consensus 248 ~s~KgVnlp~~~~~lp~ltekD~~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI 327 (453)
+++||||+||+.+++|.||+||.+||+|++++|+|+|++|||++++|+.+++++|++.+.++.|||||||++||+|++||
T Consensus 173 ~~~KgvNlPg~~~~lp~ltekD~~dl~~~~~~~vD~i~~sfVr~a~dv~~~r~~l~~~~~~i~IiaKIE~~eav~nldeI 252 (499)
T 3hqn_D 173 SDRRGVNLPGCDVDLPAVSAKDRVDLQFGVEQGVDMIFASFIRSAEQVGDVRKALGPKGRDIMIICKIENHQGVQNIDSI 252 (499)
T ss_dssp ETTCBEECTTSCCCCCSSCHHHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHHCGGGTTSEEEEEECSHHHHHTHHHH
T ss_pred eCCCceecCCCCCCCCCCCHHHHHHHHHHHHcCCCEEEecCCCCHHHHHHHHHHHHhcCCCCeEEEEECCHHHHHhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999888899999999999999999999
Q ss_pred HhhcCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecC
Q 012943 328 ISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (453)
Q Consensus 328 ~~~sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 407 (453)
++++|||||||||||+|+|+++|+.+||+|+++|+++|||||+||||||||+++|.|||||++||||||.||+||+|||+
T Consensus 253 l~~sDgImVaRGDLgvEi~~e~vp~~Qk~iI~~c~~agkpVi~ATQmLeSMi~~p~PTRAEvsDVanaV~dG~DavMLSg 332 (499)
T 3hqn_D 253 IEESDGIMVARGDLGVEIPAEKVVVAQKILISKCNVAGKPVICATQMLESMTYNPRPTRAEVSDVANAVFNGADCVMLSG 332 (499)
T ss_dssp HHHSSEEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHHTCCEEEESSSSGGGGTSSSCCHHHHHHHHHHHHHTCSEEEESH
T ss_pred HHhCCcEEEccccccCcCCHHHHHHHHHHHHHHHHHcCCCeEEeehhHHHhccCCCccHHHHHHHHHHHHcCCcEEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCHHHHHHHHHHHHHHHhcCCCCCCCc
Q 012943 408 ETAHGKFPLKAVKVMHTVALRTESSLPVSITP 439 (453)
Q Consensus 408 ETA~G~yP~eaV~~m~~I~~~aE~~~~~~~~~ 439 (453)
|||.|+||+|||++|++||++||+.++|.+.|
T Consensus 333 ETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~ 364 (499)
T 3hqn_D 333 ETAKGKYPNEVVQYMARICLEAQSALNEYVFF 364 (499)
T ss_dssp HHHTCSCHHHHHHHHHHHHHHHHHHCCHHHHH
T ss_pred cccCCCCHHHHHHHHHHHHHHHHhcchhHHHH
Confidence 99999999999999999999999988765444
No 4
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A*
Probab=100.00 E-value=1e-106 Score=857.73 Aligned_cols=349 Identities=41% Similarity=0.651 Sum_probs=331.8
Q ss_pred CCCCCCCcEEEEecCCCCCCHHHHHHHHHhCCcEEEeecCCCChHHHHHHHHHHHHHHhh-cCCCcEEEEeecCCCeeee
Q 012943 94 GPNARRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQ-FEDKAVAIMLDTKGPEVRS 172 (453)
Q Consensus 94 ~~~~~r~TKIi~TiGPss~s~e~i~~Li~aGmnvaRiNfSHg~~e~~~~~I~~iR~a~~~-~~~~~iaIllDLkGPkIRt 172 (453)
+..++|||||||||||+|+++++|++|+++||||||||||||++++|+++++++|++++. ++ +||+||+||+||||||
T Consensus 39 ~~~~~RrTKIv~TlGPas~~~e~l~~Li~aGmnv~RlNfSHg~~e~h~~~i~~iR~~~~~~~~-~~vaIl~Dl~GPkIR~ 117 (526)
T 4drs_A 39 NDVTQRKTQIICTIGPSCNNVESLIGLIDKGMSVARLNFSHGDHESHFKTLQNIREAAKARPH-STVGIMLDTKGPEIRT 117 (526)
T ss_dssp ---CCCCSEEEEECCGGGCSHHHHHHHHHHTCCEEEEETTSSCHHHHHHHHHHHHHHHHTCTT-CCCEEEEECCCSCCBB
T ss_pred CCcccCCceEEEeeCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHhcCC-CceEEEEECCCCeeEE
Confidence 445689999999999999999999999999999999999999999999999999999874 55 9999999999999999
Q ss_pred cCCCC--ceeecCCCEEEEEeec-CCCCccEEEecccccccccccCCEEEEeCCeeEEEEEEEeCCeEEEEEeeCcEecc
Q 012943 173 GDVPQ--PIILKEGQEFNFTIKR-GVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVVDGGELKS 249 (453)
Q Consensus 173 G~l~~--~i~L~~G~~v~lt~~~-~~~~~~~I~v~~~~l~~~vk~Gd~IlIDDG~I~L~V~ev~~~~v~~~V~ngG~L~s 249 (453)
|.+.+ ++.|++||+|+|+.+. ..++.+.|+++|++|+++|++||+||+|||+|.|+|.+++++.+.|+|++||.|++
T Consensus 118 g~~~~~~~i~L~~G~~v~lt~~~~~~g~~~~i~v~y~~l~~~v~~Gd~IlidDG~i~l~V~~v~~~~i~~~V~~gG~L~~ 197 (526)
T 4drs_A 118 GMLEGGKPIELKAGQTLKITTDYSMLGNSECISCSYSLLPKSVQIGSTVLIADGSLSTQVLEIGDDFIVCKVLNSVTIGE 197 (526)
T ss_dssp CCBSTTCCEECCTTSEEEEESCCSSCBCSSEEEBSCTTSTTTCCTTCEEEETTTTEEEEEEEECSSEEEEECCSCCEECS
T ss_pred EecCCCCeEEecCCCEEEEEeCCccCCCcceeeecchhhHHHhcCCCEEEEeCCCceEEEEEEeCCeEEEEeccCccccc
Confidence 99974 6999999999999874 45788899999999999999999999999999999999999999999999999999
Q ss_pred cceeecCCCccCCCCCCHhhHHH-HHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcC-------CCceEEEEecChhhh
Q 012943 250 RRHLNVRGKSANLPSITDKDWED-IKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCN-------ADIHVIVKIESADSI 321 (453)
Q Consensus 250 ~KgVnlp~~~~~lp~ltekD~~D-I~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~-------~~i~IIakIET~~gv 321 (453)
+||||+||..+++|.||+||.+| |+|++++|+|||++|||++++||.++|++|++.+ .+++||||||+++|+
T Consensus 198 ~KgvNlP~~~l~lp~lTekD~~D~l~fa~~~~vD~ialSFVr~~~Dv~~~r~~l~~~g~~~~~~~~~i~IiaKIE~~~av 277 (526)
T 4drs_A 198 RKNMNLPGCKVHLPIIGDKDRHDIVDFALKYNLDFIALSFVQNGADVQLCRQIISENTQYSNGIPSSIKIISKIENLEGV 277 (526)
T ss_dssp SCBEECTTCCCCCCSSCHHHHHHHHHTTTTTTCSEEEETTCCSHHHHHHHHHHHHTCCTTTTTCCCCCEEEEEECSHHHH
T ss_pred cccccCCCcccCcccccchhHHHHHHHHHHhccCeeeecccCchhhHHHHHHHHHhhCcccccccccceeeeehhccHHH
Confidence 99999999999999999999998 6899999999999999999999999999999876 368999999999999
Q ss_pred ccHHHHHhhcCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCcc
Q 012943 322 PNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGAD 401 (453)
Q Consensus 322 ~NldeI~~~sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D 401 (453)
+|++||++++|||||||||||+|+|+++||.+||+|+++|+++|||||+||||||||+++|.|||||++||||||.||+|
T Consensus 278 ~NldeIi~~sDgIMVARGDLgvEip~e~vp~~QK~II~~c~~~gKPVI~ATQmLeSMi~np~PTRAEvsDVAnAV~DGaD 357 (526)
T 4drs_A 278 INFDSICSESDGIMVARGDLGMEIPPEKIFVAQKCMISKCNVAGKPVVTATQMLESMIKSNRPTRAEMTDVANAVLDGSD 357 (526)
T ss_dssp HTHHHHHHHSSEEEEECTTHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESCTTGGGGSSSSCCHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHhhccEEEEECCcccccCCHHHHHHHHHHHHHHHHHcCCeEEEhhhhhHHHhhCCCCCCchHHHHHHHHHhCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCcccCCCCHHHHHHHHHHHHHHHhcCCCCCCCccchh
Q 012943 402 AVMLSGETAHGKFPLKAVKVMHTVALRTESSLPVSITPPTQF 443 (453)
Q Consensus 402 ~vmLs~ETA~G~yP~eaV~~m~~I~~~aE~~~~~~~~~~~~~ 443 (453)
|+|||+|||.|+||+|||++|++||++||+.++|...+..+.
T Consensus 358 avMLSgETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~ 399 (526)
T 4drs_A 358 CVMLSGETANGAFPFDAVNVMSRVCAQAETCIDYPVLYHAIH 399 (526)
T ss_dssp EEEESHHHHSCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred eEEEcchhhcccCHHHHHHHHHHHHHHHhhcccchhhhhhhh
Confidence 999999999999999999999999999999988766655443
No 5
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=100.00 E-value=6.6e-107 Score=855.14 Aligned_cols=342 Identities=39% Similarity=0.644 Sum_probs=330.8
Q ss_pred CCCCcEEEEecCCCCCCHHHHHHHHHhCCcEEEeecCCCChHHHHHHHHHHHHHHhhc-CCCcEEEEeecCCCeeeecCC
Q 012943 97 ARRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQF-EDKAVAIMLDTKGPEVRSGDV 175 (453)
Q Consensus 97 ~~r~TKIi~TiGPss~s~e~i~~Li~aGmnvaRiNfSHg~~e~~~~~I~~iR~a~~~~-~~~~iaIllDLkGPkIRtG~l 175 (453)
..|||||||||||+|+++|+|++|+++||||||||||||++++|+++++++|++++++ + +||+||+||+|||||||.+
T Consensus 34 ~~rkTKIV~TiGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~~i~~iR~~~~~~~~-~~vaIl~Dl~GPkIR~g~~ 112 (511)
T 3gg8_A 34 TAHRTRIVCTMGPACWNVDTLVKMIDAGMNVCRLNFSHGDHETHARTVQNIQEAMKQRPE-ARLAILLDTKGPEIRTGFL 112 (511)
T ss_dssp TTCSSEEEEECCTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHCTT-CCCEEEEECCCCCCBBCC-
T ss_pred ccCccEEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHcCC-CceEEEEECCCCEEecccC
Confidence 5799999999999999999999999999999999999999999999999999999998 6 9999999999999999999
Q ss_pred CC--ceeecCCCEEEEEee-cCCCCccEEEecccccccccccCCEEEEeCCeeEEEEEEEeCCeEEEEEeeCcEecccce
Q 012943 176 PQ--PIILKEGQEFNFTIK-RGVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVVDGGELKSRRH 252 (453)
Q Consensus 176 ~~--~i~L~~G~~v~lt~~-~~~~~~~~I~v~~~~l~~~vk~Gd~IlIDDG~I~L~V~ev~~~~v~~~V~ngG~L~s~Kg 252 (453)
.+ ++.|++||+|+|+.+ ...++.+.|+++|++|+++|++||+||+|||+|.|+|.+++++.+.|+|++||.|+++||
T Consensus 113 ~~~~~v~L~~G~~~~lt~~~~~~g~~~~i~v~y~~l~~~v~~Gd~IlidDG~i~l~V~~v~~~~i~~~V~~gG~L~~~Kg 192 (511)
T 3gg8_A 113 KDHKPITLQQGATLKIVTDYNLIGDETTIACSYGALPQSVKPGNTILIADGSLSVKVVEVGSDYVITQAQNTATIGERKN 192 (511)
T ss_dssp ----CEEECTTCEEEEESCTTCCCCSSEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEECSSEEEEEESSCEEECSSCB
T ss_pred CCCCCEEEccCCEEEEEECCCCCCCCCEEEcchHHHHhhcCCCCEEEEECCEEEEEEEEEeCCEEEEEEEeCeEEcCCcc
Confidence 75 799999999999988 566888999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCccCCCCCCHhhHHHH-HhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhhc
Q 012943 253 LNVRGKSANLPSITDKDWEDI-KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISAS 331 (453)
Q Consensus 253 Vnlp~~~~~lp~ltekD~~DI-~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~s 331 (453)
||+||+.+++|.||+||++|| +|++++|+|||++|||++++|+.+++++|.+.+.++.|||||||++|++|++||++++
T Consensus 193 vNlPg~~~~lp~lTekD~~Dl~~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~~~~~~iiaKIE~~eav~nldeIl~~s 272 (511)
T 3gg8_A 193 MNLPNVKVQLPVIGEKDKHDILNFGIPMGCNFIAASFVQSADDVRYIRGLLGPRGRHIRIIPKIENVEGLVNFDEILAEA 272 (511)
T ss_dssp EECTTCCCCSCSSCHHHHHHHHHTTTTTTCCEEEETTCCSHHHHHHHHHHHTGGGTTCEEEEEECSHHHHHTHHHHHHHC
T ss_pred eecCCCccCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCCeEEEEECCHHHHHhHHHHHHhC
Confidence 999999999999999999999 9999999999999999999999999999999888999999999999999999999999
Q ss_pred CEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccC
Q 012943 332 DGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAH 411 (453)
Q Consensus 332 DgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~ 411 (453)
|||||||||||+|+|+++|+.+||+|+++|+++|||||+||||||||+++|+|||||++||||||.||+||+|||+|||.
T Consensus 273 DgimVaRGDLgvei~~e~v~~~qk~ii~~~~~~gkpvi~ATQmLeSMi~~p~PTRAEvsDVAnAV~dGaDavMLSgETA~ 352 (511)
T 3gg8_A 273 DGIMIARGDLGMEIPPEKVFLAQKMMIAKCNVVGKPVITATQMLESMIKNPRPTRAEAADVANAVLDGTDCVMLSGETAN 352 (511)
T ss_dssp SCEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHTTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHT
T ss_pred CeEEEecchhcCcCCHHHHHHHHHHHHHHHHHcCCCeEEehHHHHHhhcCCCccHHHHHHHHHHHHhCCCEEEecccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCCCCCCc
Q 012943 412 GKFPLKAVKVMHTVALRTESSLPVSITP 439 (453)
Q Consensus 412 G~yP~eaV~~m~~I~~~aE~~~~~~~~~ 439 (453)
|+||+|||++|++||+++|+.++|.+.|
T Consensus 353 G~yPveaV~~M~~I~~~aE~~~~~~~~~ 380 (511)
T 3gg8_A 353 GEFPVITVETMARICYEAETCVDYPALY 380 (511)
T ss_dssp CSCHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhchhHHHHH
Confidence 9999999999999999999988765444
No 6
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=100.00 E-value=3.1e-106 Score=840.41 Aligned_cols=336 Identities=30% Similarity=0.529 Sum_probs=328.2
Q ss_pred CCCCcEEEEecCCCCCCHH--HHHHHHHhCCcEEEeecCCCChHHHHHHHHHHHHHHhhcCCCcEEEEeecCCCeeeecC
Q 012943 97 ARRKTKIVCTIGPSTSSRE--MIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSGD 174 (453)
Q Consensus 97 ~~r~TKIi~TiGPss~s~e--~i~~Li~aGmnvaRiNfSHg~~e~~~~~I~~iR~a~~~~~~~~iaIllDLkGPkIRtG~ 174 (453)
.+|||||||||||+|+++| +|++|+++ |||||||||||++++|+++++++|+++++++ +|++||+||||||||||.
T Consensus 13 ~~r~TKIv~TiGPas~~~e~~~l~~li~a-mnv~RlNfSHg~~e~h~~~i~~iR~~~~~~g-~~vaIl~Dl~GPkIR~g~ 90 (461)
T 3qtg_A 13 ARNLTKRVATLGPSTDVLRPDELIKFLDL-VDGVRINLAHASPNEVKFRIEAVRSYEKAKN-RPLAVIVDLKGPSIRVGS 90 (461)
T ss_dssp CSCSSEEEEECSHHHHTCCHHHHHHHHTT-CSEEEEETTTCCHHHHHHHHHHHHHHHHHHT-CCCEEEEECCCCCCBCCB
T ss_pred ccCCceEEEeeCCCccCchHHHHHHHHHh-CCEEEEECCCCCHHHHHHHHHHHHHHHHHcC-CceEEEEeCCCCEEEECC
Confidence 4799999999999999998 99999999 9999999999999999999999999999998 999999999999999999
Q ss_pred CCCceeecCCCEEEEEeecCCCCccEEEecccccccccccCCEEEEeCCeeEEEEEEEeCCeEEEEEeeCcEecccceee
Q 012943 175 VPQPIILKEGQEFNFTIKRGVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVVDGGELKSRRHLN 254 (453)
Q Consensus 175 l~~~i~L~~G~~v~lt~~~~~~~~~~I~v~~~~l~~~vk~Gd~IlIDDG~I~L~V~ev~~~~v~~~V~ngG~L~s~KgVn 254 (453)
+. ++.|++||+|+|+.+...++ +.++++|++|+++|++||+||+|||+|.|+|++++++.+.|+|+|||.|+++||||
T Consensus 91 ~~-~v~L~~G~~~~lt~~~~~~~-~~i~v~y~~l~~~v~~G~~IlidDG~i~l~V~~~~~~~v~~~V~~gG~L~~~KgvN 168 (461)
T 3qtg_A 91 TS-PINVQEGEVVKFKLSDKSDG-TYIPVPNKAFFSAVEQNDVILMLDGRLRLKVTNTGSDWIEAVAESSGVITGGKAIV 168 (461)
T ss_dssp CS-CEEECTTCEEEEEECSBCCS-SSEEECCHHHHHHCCTTCEEEEGGGTEEEEEEEECSSEEEEEESSCEEECTTCBEE
T ss_pred CC-CEEEeCCCEEEEEecCCCCC-cEEEcchHHHHhhcCCCCEEEEeCCEEEEEEEEEECCEEEEEEEECCEecCCCcee
Confidence 95 69999999999999876667 88999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccCCCCCCHhhHHHHH--hhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhhcC
Q 012943 255 VRGKSANLPSITDKDWEDIK--FGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASD 332 (453)
Q Consensus 255 lp~~~~~lp~ltekD~~DI~--~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~sD 332 (453)
+||+.+++|.||+||.+||+ |++++|+|+|++|||++++|+.+++++|++.|.++.|||||||++|++|++||++++|
T Consensus 169 lPg~~~~lp~lTekD~~dl~~~~~~~~~vD~Ia~SfVr~a~Dv~~~r~~l~~~g~~~~iiaKIE~~eav~nldeIl~~sD 248 (461)
T 3qtg_A 169 VEGKDYDISTPAEEDVEALKAISPIRDNIDYVAISLAKSCKDVDSVRSLLTELGFQSQVAVKIETKGAVNNLEELVQCSD 248 (461)
T ss_dssp ETTCCCCCCSSCHHHHHHHHHHGGGGGGCCEEEECSCCSHHHHHHHHHHHHHTTCCCEEEEEECSHHHHHTHHHHHHTCS
T ss_pred cCCCCCCCCCCCHHHHHHHHHHHHhhcCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEEEEECCHHHHHhHHHHHHhcc
Confidence 99999999999999999999 9999999999999999999999999999999989999999999999999999999999
Q ss_pred EEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccCC
Q 012943 333 GAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHG 412 (453)
Q Consensus 333 gImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G 412 (453)
||||||||||+|+|+++|+.+||+|+++|+++|||||+||||||||+++|.|||||++||||||.||+||+|||+|||.|
T Consensus 249 gImVaRGDLgvei~~e~v~~~Qk~ii~~~~~~gkpvi~ATQMLeSMi~~p~PTRAEvsDVanAV~dGaDavMLSgETA~G 328 (461)
T 3qtg_A 249 YVVVARGDLGLHYGLDALPIVQRRIVHTSLKYGKPIAVATQLLDSMQSSPIPTRAEINDVFTTASMGVDSLWLTNETASG 328 (461)
T ss_dssp EEEEEHHHHTTTSCTTTHHHHHHHHHHHHHHTTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHTTCSEEEECHHHHTS
T ss_pred cEEEccccccccCCHHHHHHHHHHHHHHHHHhCCCEEEeccchHhhccCCCccHHHHHHHHHHHHhCCcEEEEcccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhcCCCCC
Q 012943 413 KFPLKAVKVMHTVALRTESSLPVS 436 (453)
Q Consensus 413 ~yP~eaV~~m~~I~~~aE~~~~~~ 436 (453)
+||+|||++|++||+++|+.+.+.
T Consensus 329 ~yPveaV~~m~~I~~~aE~~~~~~ 352 (461)
T 3qtg_A 329 KYPLAAVSWLSRILMNVEYQIPQS 352 (461)
T ss_dssp SCHHHHHHHHHHHHHTCCCCCCCC
T ss_pred CCHHHHHHHHHHHHHHHHhhhhhc
Confidence 999999999999999999987653
No 7
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A
Probab=100.00 E-value=6.8e-106 Score=843.28 Aligned_cols=342 Identities=44% Similarity=0.728 Sum_probs=316.1
Q ss_pred CCCcEEEEecCCCCCCHHHHHHHHHhCCcEEEeecCCCChHHHHHHHHHHHHHHhhcCCCcEEEEeecCCCeeeecCCC-
Q 012943 98 RRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSGDVP- 176 (453)
Q Consensus 98 ~r~TKIi~TiGPss~s~e~i~~Li~aGmnvaRiNfSHg~~e~~~~~I~~iR~a~~~~~~~~iaIllDLkGPkIRtG~l~- 176 (453)
+|||||||||||+|+++++|++|+++||||||||||||++++|+++++++|+++++++ +|++|++||+|||||||.+.
T Consensus 1 ~r~tkIv~TiGPas~~~e~l~~li~aGm~v~RlNfsHg~~e~h~~~i~~iR~~~~~~~-~~v~il~Dl~GPkiR~g~~~~ 79 (470)
T 1e0t_A 1 MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTG-KTAAILLDTKGPEIRTMKLEG 79 (470)
T ss_dssp CCCSEEEEECCGGGCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHHT-CCCEEEEECCCCCEEBCCBGG
T ss_pred CCcceEEEECCCccCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHhcC-CceEEEEeCCCCEEEEEecCC
Confidence 4899999999999999999999999999999999999999999999999999999998 99999999999999999997
Q ss_pred -CceeecCCCEEEEEee-cCCCCccEEEecccccccccccCCEEEEeCCeeEEEEEEEeCCeEEEEEeeCcEecccceee
Q 012943 177 -QPIILKEGQEFNFTIK-RGVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVVDGGELKSRRHLN 254 (453)
Q Consensus 177 -~~i~L~~G~~v~lt~~-~~~~~~~~I~v~~~~l~~~vk~Gd~IlIDDG~I~L~V~ev~~~~v~~~V~ngG~L~s~KgVn 254 (453)
+++.|++||+|+|+.+ ...++.+.++++|++|+++|++||.||+|||+|.|+|.+++++.+.|+|+|||.|+++||||
T Consensus 80 ~~~v~L~~G~~~~lt~~~~~~g~~~~v~v~y~~l~~~v~~Gd~ilidDG~i~l~V~~~~~~~i~~~v~~gG~L~~~KgvN 159 (470)
T 1e0t_A 80 GNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVN 159 (470)
T ss_dssp GCCEEECTTCEEEEESCTTCCBBTTEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEEETTEEEEEECSCEEECSSCEEE
T ss_pred CCceEEecCCEEEEEeCCccCCCCCEEecchHHHHhhcCCCCEEEEeCCEEEEEEEEEeCCeEEEEEecCcEEeCCceee
Confidence 3799999999999988 34688889999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccCCCCCCHhhHHHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhc-CCCceEEEEecChhhhccHHHHHhhcCE
Q 012943 255 VRGKSANLPSITDKDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSC-NADIHVIVKIESADSIPNLHSIISASDG 333 (453)
Q Consensus 255 lp~~~~~lp~ltekD~~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~-~~~i~IIakIET~~gv~NldeI~~~sDg 333 (453)
+||+.+++|.||++|.+||+|++++|+|+|++|||++++|+.+++++|.+. +.++.|||||||++|++|++||++++||
T Consensus 160 lPg~~~~lp~ltekD~~Di~~~l~~gvD~I~lsfV~saeDv~~~~~~l~~~~~~~i~IiakIEt~eav~nldeI~~~sDg 239 (470)
T 1e0t_A 160 LPGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKIENQEGLNNFDEILEASDG 239 (470)
T ss_dssp CSSCCCCCCSSCHHHHHHHHHHHHHTCSEEEESSCCSHHHHHHHHHHHHTTTCTTCEEEEEECSHHHHHTHHHHHHHSSE
T ss_pred cCCCcCCCCCCCcCCHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHHhcCCCceEEEEECCHHHHHhHHHHHHHCCE
Confidence 999999999999999999999999999999999999999999999999998 8899999999999999999999999999
Q ss_pred EEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccCCC
Q 012943 334 AMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGK 413 (453)
Q Consensus 334 ImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~ 413 (453)
|||||||||+|+|+++|+.+|++|+.+|+++|||+|+||||||||+++|+|||||++||||||.||+||+|||+|||.|+
T Consensus 240 ImVargDLgveig~e~v~~~qk~ii~~araaGkpvI~ATQMLeSMi~~p~PTRAEvsDVanAV~dG~DavMLSgETA~G~ 319 (470)
T 1e0t_A 240 IMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATMMLDSMIKNPRPTDAEAGDVANAILDGTDAVMLSGESAKGK 319 (470)
T ss_dssp EEEEHHHHHHHSCHHHHHHHHHHHHHHHHHHTCEEEEECC---------CCCHHHHHHHHHHHHHTCSEEEECCC-----
T ss_pred EEECchHhhhhcCHHHHHHHHHHHHHHHHHcCCCEEEechhhHhhccCCCccHHHHhhhhHhhhcCccEEEecccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCCCCcc
Q 012943 414 FPLKAVKVMHTVALRTESSLPVSITPP 440 (453)
Q Consensus 414 yP~eaV~~m~~I~~~aE~~~~~~~~~~ 440 (453)
||+|||++|++||.++|+.+++.+.+.
T Consensus 320 yPveaV~~m~~I~~~~E~~~~~~~~~~ 346 (470)
T 1e0t_A 320 YPLEAVSIMATICERTDRVMNSRLEFN 346 (470)
T ss_dssp -CHHHHHHHHHHHHHHHTTCCCCCC--
T ss_pred CHHHHHHHHHHHHHHHHhhhhhhHHHh
Confidence 999999999999999999877655443
No 8
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=100.00 E-value=3.4e-106 Score=865.48 Aligned_cols=344 Identities=47% Similarity=0.759 Sum_probs=332.8
Q ss_pred CCCCCCcEEEEecCCCCCCHHHHHHHHHhCCcEEEeecCCCChHHHHHHHHHHHHHHhhcCCCcEEEEeecCCCeeeecC
Q 012943 95 PNARRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSGD 174 (453)
Q Consensus 95 ~~~~r~TKIi~TiGPss~s~e~i~~Li~aGmnvaRiNfSHg~~e~~~~~I~~iR~a~~~~~~~~iaIllDLkGPkIRtG~ 174 (453)
|..+|||||||||||+|+++|+|++|+++||||||||||||++++|+++|+++|+++++++ +||+||+||||||||||.
T Consensus 19 ~~~~r~TKIv~TiGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~~i~~iR~~~~~~~-~~vail~Dl~GPkiR~g~ 97 (606)
T 3t05_A 19 SHMMRKTKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKVAKRLD-KIVAILLDTKGPEIRTHN 97 (606)
T ss_dssp ---CCCSEEEEECCGGGCSHHHHHHHHHTTEEEEEEETTSSCHHHHHHHHHHHHHHHHHTT-CCCEEEEECCCCCCBBCC
T ss_pred cccccCceEEEEcCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhC-CCEEEEEeCCCCEEEeec
Confidence 4457999999999999999999999999999999999999999999999999999999998 999999999999999999
Q ss_pred CC-CceeecCCCEEEEEeecCCCCccEEEecccccccccccCCEEEEeCCeeEEEE--EEEeCCeEEEEEeeCcEecccc
Q 012943 175 VP-QPIILKEGQEFNFTIKRGVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAV--KSKTKDLVKCIVVDGGELKSRR 251 (453)
Q Consensus 175 l~-~~i~L~~G~~v~lt~~~~~~~~~~I~v~~~~l~~~vk~Gd~IlIDDG~I~L~V--~ev~~~~v~~~V~ngG~L~s~K 251 (453)
+. +++.|++||+|+|+.+...++.+.|+++|++|+++|++||+||+|||+|.|+| ++++++.+.|+|+|||.|+++|
T Consensus 98 ~~~~~i~L~~G~~~~lt~~~~~g~~~~i~v~y~~l~~~v~~G~~ilidDG~i~l~V~~~~~~~~~v~~~V~~gG~L~~~K 177 (606)
T 3t05_A 98 MKDGIIELERGNEVIVSMNEVEGTPEKFSVTYENLINDVQVGSYILLDDGLIELQVKDIDHAKKEVKCDILNSGELKNKK 177 (606)
T ss_dssp BTTSEEECCSSCEEEEESSCCCBCSSEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEEETTTTEEEEEECSCCEEETTC
T ss_pred CCCCCEEEcCCCEEEEEecCcCCCCCEEEeccHHHHHhcCCCCEEEEeCCeEEEEEEEEEecCCEEEEEEEECeEEeCCc
Confidence 97 47999999999999988788889999999999999999999999999999999 6788999999999999999999
Q ss_pred eeecCCCccCCCCCCHhhHHHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhhc
Q 012943 252 HLNVRGKSANLPSITDKDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISAS 331 (453)
Q Consensus 252 gVnlp~~~~~lp~ltekD~~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~s 331 (453)
|||+||..+++|.||+||++||+|++++|+|||++|||++++|+.+++++|.+.+.++.|||||||++|++|++||++++
T Consensus 178 gvNlPg~~~~lp~ltekD~~dl~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~~~~i~IiaKIE~~eav~nldeIl~~s 257 (606)
T 3t05_A 178 GVNLPGVRVSLPGITEKDAEDIRFGIKENVDFIAASFVRRPSDVLEIREILEEQKANISVFPKIENQEGIDNIEEILEVS 257 (606)
T ss_dssp BEECSSSCCCCCSSCHHHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHHHHTTCCCEEEECCCSHHHHHTHHHHHHHC
T ss_pred eEECCCCccCCCCCChhHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHhcCCCCeEEEEeCCHHHHHhHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccC
Q 012943 332 DGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAH 411 (453)
Q Consensus 332 DgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~ 411 (453)
|||||||||||+|+|+++|+.+||+|+++|+++|||||+||||||||+++|+|||||++||||||.||+||+|||+|||.
T Consensus 258 DGImVARGDLgvei~~e~vp~~Qk~ii~~~~~~gkpvi~ATQMLeSMi~~p~PTRAEvsDVanAv~dGaDavMLSgETA~ 337 (606)
T 3t05_A 258 DGLMVARGDMGVEIPPEKVPMVQKDLIRQCNKLGKPVITATQMLDSMQRNPRATRAEASDVANAIYDGTDAVMLSGETAA 337 (606)
T ss_dssp SCEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSSSGGGTTCSSCCHHHHHHHHHHHHHTCSEEEECHHHHS
T ss_pred CEEEEccccccCcCCHHHHHHHHHHHHHHHHHcCCCeEEehHHHHHhhcCCCccHHHHHHHHHHHHcCCCEEEecccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCCCCCCc
Q 012943 412 GKFPLKAVKVMHTVALRTESSLPVSITP 439 (453)
Q Consensus 412 G~yP~eaV~~m~~I~~~aE~~~~~~~~~ 439 (453)
|+||+|||++|++||+++|+.++|.+.+
T Consensus 338 G~yPveaV~~m~~I~~~aE~~~~~~~~~ 365 (606)
T 3t05_A 338 GLYPEEAVKTMRNIAVSAEAAQDYKKLL 365 (606)
T ss_dssp CSCSHHHHHHHHHHHHHHHHTSCHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhhhhhHhhh
Confidence 9999999999999999999988765443
No 9
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=100.00 E-value=5.5e-104 Score=849.49 Aligned_cols=337 Identities=47% Similarity=0.774 Sum_probs=329.2
Q ss_pred CCCcEEEEecCCCCCCHHHHHHHHHhCCcEEEeecCCCChHHHHHHHHHHHHHHhhcCCCcEEEEeecCCCeeeecCCCC
Q 012943 98 RRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSGDVPQ 177 (453)
Q Consensus 98 ~r~TKIi~TiGPss~s~e~i~~Li~aGmnvaRiNfSHg~~e~~~~~I~~iR~a~~~~~~~~iaIllDLkGPkIRtG~l~~ 177 (453)
+|||||||||||+|+++++|++|+++||||||||||||++++|+++++++|+++++++ +|++||+||+|||||||.+.+
T Consensus 2 ~r~tkIv~TiGPas~~~~~l~~l~~aGm~v~RlNfsHg~~~~h~~~i~~ir~~~~~~~-~~v~il~Dl~GPkiR~g~~~~ 80 (587)
T 2e28_A 2 KRKTKIVSTIGPASESVDKLVQLMEAGMNVARLNFSHGDHEEHGRRIANIREAAKRTG-RTVAILLDTKGPEIRTHNMEN 80 (587)
T ss_dssp CCCSEEEEECCTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHHHHHHHHHHHHHTT-CCCEEEEECCCCCCBBCCCTT
T ss_pred CCCceEEEECCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHhC-CceEEEEeCCCCEEEEeccCC
Confidence 6899999999999999999999999999999999999999999999999999999998 999999999999999999975
Q ss_pred -ceeecCCCEEEEEeecCCCCccEEEecccccccccccCCEEEEeCCeeEEEEEEE--eCCeEEEEEeeCcEecccceee
Q 012943 178 -PIILKEGQEFNFTIKRGVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSK--TKDLVKCIVVDGGELKSRRHLN 254 (453)
Q Consensus 178 -~i~L~~G~~v~lt~~~~~~~~~~I~v~~~~l~~~vk~Gd~IlIDDG~I~L~V~ev--~~~~v~~~V~ngG~L~s~KgVn 254 (453)
++.|++||+|+|+.+...++.+.++++|++|+++|++||+||+|||+|.|+|+++ +++.+.|+|+|||.|+++||||
T Consensus 81 ~~i~l~~G~~~~l~~~~~~g~~~~i~v~y~~l~~~v~~G~~ilidDG~i~l~V~~~~~~~~~i~~~v~~gg~l~~~Kgvn 160 (587)
T 2e28_A 81 GAIELKEGSKLVISMSEVLGTPEKISVTYPSLIDDVSVGAKILLDDGLISLEVNAVDKQAGEIVTTVLNGGVLKNKKGVN 160 (587)
T ss_dssp SCBCCCSSCEEEEESSCCCCCSSEEEBSCTTSTTTCCTTCEEEETTTTEEEEEEEEETTTTEEEEECCSCCCBCSSCBEE
T ss_pred CcEEEecCCEEEEEecCcCCCCCEEecchHHHHhhcCCCCEEEEeCCEEEEEEEEEecCCCeEEEEEecCCEEcCCceee
Confidence 7999999999999986678889999999999999999999999999999999999 8899999999999999999999
Q ss_pred cCCCccCCCCCCHhhHHHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCC-CceEEEEecChhhhccHHHHHhhcCE
Q 012943 255 VRGKSANLPSITDKDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNA-DIHVIVKIESADSIPNLHSIISASDG 333 (453)
Q Consensus 255 lp~~~~~lp~ltekD~~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~-~i~IIakIET~~gv~NldeI~~~sDg 333 (453)
+||+.+++|.||++|.+||+|++++|+|+|++|||++++|++++++++.+.|. ++.||+||||++|++|+|||++++||
T Consensus 161 lPg~~~~lp~ltekD~~di~~~l~~g~d~v~~sfV~~a~dv~~~~~~l~~~~~~~~~iiakIE~~eav~nldeIl~~~Dg 240 (587)
T 2e28_A 161 VPGVKVNLPGITEKDRADILFGIRQGIDFIAASFVRRASDVLEIRELLEAHDALHIQIIAKIENEEGVANIDEILEAADG 240 (587)
T ss_dssp CTTSCCCCCSCCHHHHHHHHHHHHHTCSEEEESSCCSHHHHHHHHHHHHHTTCTTSEEEEEECSHHHHHTHHHHHHHSSE
T ss_pred cCCCcCCCCCCCcccHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHHcCCCCceEEEEECCHHHHHhHHHHHHhCCE
Confidence 99999999999999999999999999999999999999999999999999884 89999999999999999999999999
Q ss_pred EEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccCCC
Q 012943 334 AMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGK 413 (453)
Q Consensus 334 ImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~ 413 (453)
|||||||||+|+|+++|+.+||+|+++|+++|||||+||||||||+++|+|||||++||||||.||+||+|||+|||.|+
T Consensus 241 ImVargDLgvei~~~~v~~~qk~ii~~~~~~gkpvi~ATQmLeSMi~~p~PTRAE~sDvanav~dG~DavMLSgETA~G~ 320 (587)
T 2e28_A 241 LMVARGDLGVEIPAEEVPLIQKLLIKKSNMLGKPVITATQMLDSMQRNPRPTRAEASDVANAIFDGTDAVMLSGETAAGQ 320 (587)
T ss_dssp EEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSSSGGGGTCSSCCHHHHHHHHHHHHHTCSEEEESHHHHTCS
T ss_pred EEEcCchhhhhcCHHHHHHHHHHHHHHHHHcCCCeEEechhhHhhccCCCccHHHHhccchhhhhCcceeeecccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhcCCCC
Q 012943 414 FPLKAVKVMHTVALRTESSLPV 435 (453)
Q Consensus 414 yP~eaV~~m~~I~~~aE~~~~~ 435 (453)
||+|||++|++||+++|+.+++
T Consensus 321 yPveaV~~m~~I~~~~E~~~~~ 342 (587)
T 2e28_A 321 YPVEAVKTMHQIALRTEQALEH 342 (587)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCH
T ss_pred CHHHHHHHHHHHHHHHhhhhhh
Confidence 9999999999999999997654
No 10
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=100.00 E-value=1e-100 Score=809.84 Aligned_cols=341 Identities=37% Similarity=0.630 Sum_probs=328.7
Q ss_pred CCCCCcEEEEecCCCCCCHHHHHHHHHhCCcEEEeecCCCChHHHHHHHHHHHHHHhhcCCCcEEEEeecCCCeeeecCC
Q 012943 96 NARRKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEVRSGDV 175 (453)
Q Consensus 96 ~~~r~TKIi~TiGPss~s~e~i~~Li~aGmnvaRiNfSHg~~e~~~~~I~~iR~a~~~~~~~~iaIllDLkGPkIRtG~l 175 (453)
..+|||||||||||+|+++++|++|+++||||||||||||++++|+++++++|+++++++++||+||+||||||||||.+
T Consensus 16 ~~~r~tkIv~TlGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~~i~~ir~~~~~~~~~~v~il~Dl~GPkiR~g~~ 95 (500)
T 1a3w_A 16 SDLRRTSIIGTIGPKTNNPETLVALRKAGLNIVRMNFSHGSYEYHKSVIDNARKSEELYPGRPLAIALDTKGPEIRTGTT 95 (500)
T ss_dssp CCCCCSBCCEECCGGGCSHHHHHHHHHHTCCSEECBTTSCCHHHHHHHHHHHHHHHHHCCSSCCCCEEECCCSCCBBCCC
T ss_pred ccCCCcEEEEEcCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHHHHHHHHHcCCcceEEEEeCCCCEEEEeec
Confidence 45799999999999999999999999999999999999999999999999999999998669999999999999999999
Q ss_pred CC--ceeecCCCEEEEEeec---CCCCccEEEecccccccccccCCEEEEeCCeeEEEEEEE-eCCeEEEEEeeCcEecc
Q 012943 176 PQ--PIILKEGQEFNFTIKR---GVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSK-TKDLVKCIVVDGGELKS 249 (453)
Q Consensus 176 ~~--~i~L~~G~~v~lt~~~---~~~~~~~I~v~~~~l~~~vk~Gd~IlIDDG~I~L~V~ev-~~~~v~~~V~ngG~L~s 249 (453)
.+ ++.|++||+|+|+.+. ..++.+.++++|++|+++|++||.||+|||+|.|+|+++ +++.+.|+|+|||.|++
T Consensus 96 ~~~~~v~l~~G~~~~lt~~~~~~~~g~~~~v~v~y~~l~~~v~~Gd~ilidDG~i~l~V~~~~~~~~v~~~v~~gG~L~~ 175 (500)
T 1a3w_A 96 TNDVDYPIPPNHEMIFTTDDKYAKACDDKIMYVDYKNITKVISAGRIIYVDDGVLSFQVLEVVDDKTLKVKALNAGKICS 175 (500)
T ss_dssp SSSSCCCCCSSCEEEEECSSTTTTTCCSSCEEBSCTTHHHHCCTTCEEEETTTTEEEECCBCCC--CEEEEBCSCCCCCS
T ss_pred CCCCceEeecCCEEEEEeCCcccCCCCCcEEEechHHHHhhcCCCCEEEEeCCEEEEEEEEEccCCeEEEEEecCCEEeC
Confidence 74 6999999999999875 357888999999999999999999999999999999999 89999999999999999
Q ss_pred cceeecCCCccCCCCCCHhhHHHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHh
Q 012943 250 RRHLNVRGKSANLPSITDKDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIIS 329 (453)
Q Consensus 250 ~KgVnlp~~~~~lp~ltekD~~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~ 329 (453)
+||||+||+.+++|.||++|.+||+|+++.|+|+|++|||++++|+.++++++.+.+.++.||+||||++|++|++||++
T Consensus 176 ~KgvNlPg~~~~lp~lt~~D~~DI~~~l~~g~d~I~lpfV~saeDv~~~~~~l~~~~~~i~IiakIEt~eav~nldeI~~ 255 (500)
T 1a3w_A 176 HKGVNLPGTDVDLPALSEKDKEDLRFGVKNGVHMVFASFIRTANDVLTIREVLGEQGKDVKIIVKIENQQGVNNFDEILK 255 (500)
T ss_dssp SCBEECTTCCCCCCSSCHHHHHHHHHHHHHTCSEEEECSCCSHHHHHHHHHHHHHHHTTSEEEEEECSSHHHHSHHHHHH
T ss_pred CCCCcCCCCccCCCCCChhHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHhcCCCcEEEEEECChHHHHhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999988889999999999999999999999
Q ss_pred hcCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcc
Q 012943 330 ASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGET 409 (453)
Q Consensus 330 ~sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ET 409 (453)
++||||||||||++++|.++++.+|++|+.+|+++|||+|+||||||||+.+|.|||||++|++|++.+|+|++|||+||
T Consensus 256 ~~DgImvgrgDLgvelg~~~v~~aqk~ii~aaraaGkpvi~ATQMLeSMi~~~~ptraEvsdva~av~~G~d~vmLs~et 335 (500)
T 1a3w_A 256 VTDGVMVARGDLGIEIPAPEVLAVQKKLIAKSNLAGKPVICATQMLESMTYNPRPTRAEVSDVGNAILDGADCVMLSGET 335 (500)
T ss_dssp HSSEEEECHHHHHHHTTGGGHHHHHHHHHHHHHHHTCCEEECSSTTGGGGSCSSCCHHHHHHHHHHHHHTCSEECBSTTT
T ss_pred hCCEEEECchHhhhhcCcHHHHHHHHHHHHHHHhcCCCEEEEeehhhhhccCCCchHHHHHHHHHHHHhCCCEEEecchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHHhcCCCCC
Q 012943 410 AHGKFPLKAVKVMHTVALRTESSLPVS 436 (453)
Q Consensus 410 A~G~yP~eaV~~m~~I~~~aE~~~~~~ 436 (453)
+.|+||+|||++|++||+++|+.++|.
T Consensus 336 a~G~yPveaV~~m~~I~~~aE~~~~~~ 362 (500)
T 1a3w_A 336 AKGNYPINAVTTMAETAVIAEQAIAYL 362 (500)
T ss_dssp TTCSCHHHHHHHHHHHHHHHTTSCCHH
T ss_pred hcchhHHHHHHHHHHHHHHhhhhhhhh
Confidence 999999999999999999999976654
No 11
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5
Probab=99.75 E-value=5.6e-19 Score=179.17 Aligned_cols=150 Identities=13% Similarity=0.124 Sum_probs=128.2
Q ss_pred HHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhc--------------------------------CCCceEEEEecCh
Q 012943 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSC--------------------------------NADIHVIVKIESA 318 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~--------------------------------~~~i~IIakIET~ 318 (453)
.||+++++.|+++|.+|||+++++++.+++++... +.++.|+++|||+
T Consensus 108 ~di~~~LdaGa~gImlP~V~saee~~~~~~~~~~~p~g~Rg~~~~a~~~G~~~~~~~~~~~~y~~~a~~~i~vi~mIEt~ 187 (339)
T 1izc_A 108 VSLSTALDAGAAGIVIPHVETVEEVREFVKEMYYGPIGRRSFSPWTFSPGIADASLFPNDPYNVATSNNHVCIIPQIESV 187 (339)
T ss_dssp HHHHHHHHHTCSEEEETTCCCHHHHHHHHHHHSCTTTCCCCCCSTTCBTTTBCCCSSTTCTTCHHHHHHHCEEEEEECSH
T ss_pred HHHHHHHhCCCCEEEeCCCCCHHHHHHHHHHhccCccCcccccchhhcccccccccccchhhhhhhcCcCceEEEEEChH
Confidence 58899999999999999999999999999888531 1247899999999
Q ss_pred hhhccHHHHHhh--cCEEEEeCCCcccc--------CCC---CCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCc
Q 012943 319 DSIPNLHSIISA--SDGAMVARGDLGAE--------LPI---EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPT 385 (453)
Q Consensus 319 ~gv~NldeI~~~--sDgImIgRGDLg~e--------lg~---e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~Pt 385 (453)
+|+.|+++|+++ +|+++||++||+.+ +|. +.+..++++++.+|+++|||++..+ ..|
T Consensus 188 ~av~nldeIaa~~~vD~l~iG~~DLs~~~~~~~~~~lG~~~~p~v~~a~~~iv~aaraaGk~~g~~~---------~d~- 257 (339)
T 1izc_A 188 KGVENVDAIAAMPEIHGLMFGPGDYMIDAGLDLNGALSGVPHPTFVEAMTKFSTAAQRNGVPIFGGA---------LSV- 257 (339)
T ss_dssp HHHHTHHHHHTCTTCCCEEECHHHHHHHTTCCTTCCTTSCCCHHHHHHHHHHHHHHHHTTCCEEEEC---------SSG-
T ss_pred HHHHHHHHHhcCCCCCEEEECHHHHHhhhhcccchhhCCCCCHHHHHHHHHHHHHHHHhCCceeEec---------CCH-
Confidence 999999999975 89999999999999 887 6799999999999999999997643 233
Q ss_pred hHHHHHHHHHHHhCccEEEecCcccC--CCCHHHHHHHHHHHHHHHhcCCCC
Q 012943 386 RAEVSDIAIAVREGADAVMLSGETAH--GKFPLKAVKVMHTVALRTESSLPV 435 (453)
Q Consensus 386 rAEv~Dv~nav~~G~D~vmLs~ETA~--G~yP~eaV~~m~~I~~~aE~~~~~ 435 (453)
.++.+++..|+|+++++.++.. +.| .+.|+++++|+.++|+.-..
T Consensus 258 ----~~a~~~~~~Gf~~l~~~~di~~l~~~~-~~~v~~a~~iv~a~e~~~~~ 304 (339)
T 1izc_A 258 ----DMVPSLIEQGYRAIAVQFDVWGLSRLV-HGSLAQARASAKQFAGQGKA 304 (339)
T ss_dssp ----GGHHHHHHTTEEEEEEEEHHHHHHHHH-HHHHHHHHHHHGGGCC----
T ss_pred ----HHHHHHHHhCCCEEEecHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhh
Confidence 4567899999999999999876 666 79999999999999876443
No 12
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=99.69 E-value=1e-18 Score=171.55 Aligned_cols=125 Identities=23% Similarity=0.288 Sum_probs=102.2
Q ss_pred HHHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHh---------------------------cCCCceEEEEecChhhhc
Q 012943 270 WEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKS---------------------------CNADIHVIVKIESADSIP 322 (453)
Q Consensus 270 ~~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~---------------------------~~~~i~IIakIET~~gv~ 322 (453)
..+|+++++.|+++|.+|||++++|++.+.+.+.. .+.++.|+++|||++|+.
T Consensus 80 ~~~i~~~l~~g~~~I~~P~V~s~ee~~~~~~~~~~~p~G~Rg~~~~~~~~~~~g~~~~y~~~~~~~~~v~~~IEt~~av~ 159 (267)
T 2vws_A 80 KPLIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALD 159 (267)
T ss_dssp HHHHHHHHHTTCCEEEECCCCSHHHHHHHHHHTSCTTTSCCCSCGGGSGGGGGGTSTTHHHHHHHHCEEEEECCSHHHHH
T ss_pred HHHHHHHHHhCCCEEEeCCCCCHHHHHHHHHHHcCCCCCccccccchhhhhhcCcchhhhhhcccccEEEEEECCHHHHH
Confidence 46788889999999999999999999998776531 123588999999999999
Q ss_pred cHHHHHhh--cCEEEEeCCCccccCCC------CCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHH
Q 012943 323 NLHSIISA--SDGAMVARGDLGAELPI------EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI 394 (453)
Q Consensus 323 NldeI~~~--sDgImIgRGDLg~elg~------e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~n 394 (453)
|+++|+++ +|+++||++||+.++|. +.+..++++++.+|+++|||+++.+ ..|. ....
T Consensus 160 ~~~eIa~~~gvd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~aaG~~~~v~~---------~d~~-----~a~~ 225 (267)
T 2vws_A 160 NLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAGFLA---------VAPD-----MAQQ 225 (267)
T ss_dssp THHHHHTSTTCCEEEECHHHHHHHTTCSSSCCTHHHHHHHHHHHHHHHHTTCEEEEEC---------SSHH-----HHHH
T ss_pred HHHHHhCCCCCCEEEEChHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCeEEEec---------CCHH-----HHHH
Confidence 99999987 89999999999999997 4588999999999999999998732 2332 2335
Q ss_pred HHHhCccEEEecCc
Q 012943 395 AVREGADAVMLSGE 408 (453)
Q Consensus 395 av~~G~D~vmLs~E 408 (453)
++..|++.+.++.+
T Consensus 226 ~~~~G~~~~s~~~d 239 (267)
T 2vws_A 226 CLAWGANFVAVGVD 239 (267)
T ss_dssp HHHTTCCEEEEEEH
T ss_pred HHHCCCCEEEEchH
Confidence 56667776666533
No 13
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=99.68 E-value=2.9e-17 Score=163.08 Aligned_cols=125 Identities=23% Similarity=0.250 Sum_probs=102.2
Q ss_pred HHHHHhhhhcCCcEEEeccccCHHHHHHHHHHHH---------------------------hcCCCceEEEEecChhhhc
Q 012943 270 WEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLK---------------------------SCNADIHVIVKIESADSIP 322 (453)
Q Consensus 270 ~~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~---------------------------~~~~~i~IIakIET~~gv~ 322 (453)
..||+++++.|+++|.+|||++++|++.+.+.+. ..+.++.|++||||++|++
T Consensus 101 ~~di~~~ld~ga~~ImlP~V~saeea~~~~~~~~~~p~G~Rg~g~~~~ra~~~g~~~~y~~~~~~~~~vi~mIEt~~av~ 180 (287)
T 2v5j_A 101 PVQIKQLLDVGTQTLLVPMVQNADEAREAVRATRYPPAGIRGVGSALARASRWNRIPDYLQKANDQMCVLVQIETREAMK 180 (287)
T ss_dssp HHHHHHHHHTTCCEEEESCCCSHHHHHHHHHHTSCTTTSCCCGGGTTTGGGTTTTSTTHHHHHHHHCEEEEEECSHHHHH
T ss_pred HHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHHhccCccCccccccchhhhhhccchhhhHhhcCCCcEEEEEECcHHHHH
Confidence 3489999999999999999999999998877652 1223588999999999999
Q ss_pred cHHHHHhh--cCEEEEeCCCccccCCC------CCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHH
Q 012943 323 NLHSIISA--SDGAMVARGDLGAELPI------EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI 394 (453)
Q Consensus 323 NldeI~~~--sDgImIgRGDLg~elg~------e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~n 394 (453)
|+++|+++ +|+++||++||+.++|. +++..++++++.+|+++|||+++. ...|..+ ..
T Consensus 181 n~deIaa~~~vD~l~iG~~DLs~~lg~~~~~~~p~v~~a~~~iv~aaraaG~~~gv~---------~~d~~~a-----~~ 246 (287)
T 2v5j_A 181 NLPQILDVEGVDGVFIGPADLSADMGYAGNPQHPEVQAAIEQAIVQIRESGKAPGIL---------IANEQLA-----KR 246 (287)
T ss_dssp THHHHHTSTTEEEEEECHHHHHHHTTSTTCCCSHHHHHHHHHHHHHHHHTTSEEEEE---------CCCHHHH-----HH
T ss_pred HHHHHhCcCCCCEEEECHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHcCCeeEEe---------cCCHHHH-----HH
Confidence 99999985 89999999999999997 468899999999999999999763 2344433 35
Q ss_pred HHHhCccEEEecCc
Q 012943 395 AVREGADAVMLSGE 408 (453)
Q Consensus 395 av~~G~D~vmLs~E 408 (453)
++..|++.+.++.+
T Consensus 247 ~~~~G~~~~s~~~d 260 (287)
T 2v5j_A 247 YLELGALFVAVGVD 260 (287)
T ss_dssp HHHTTCSEEEEEEH
T ss_pred HHHhCCCEEEECcH
Confidence 56667776666544
No 14
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=99.67 E-value=1.1e-16 Score=156.78 Aligned_cols=127 Identities=21% Similarity=0.268 Sum_probs=108.1
Q ss_pred HHHHhhhhcCCcEEEeccccCHHHHHHHHHHHH---------------------------hcCCCceEEEEecChhhhcc
Q 012943 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLK---------------------------SCNADIHVIVKIESADSIPN 323 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~---------------------------~~~~~i~IIakIET~~gv~N 323 (453)
.||+++++.|+|+|.+|||++++|++.+.+++. ..+.++.++++|||++|+.|
T Consensus 79 ~di~~~ld~G~~gI~lP~v~saed~~~~~~~~~~~p~G~Rg~~~~r~~~~g~~~~~~y~~~~~~~~~v~~mIEt~~av~~ 158 (261)
T 3qz6_A 79 AHVQRLLDIGAEGFMIPGVQSAETMRETVRLAKYPPLGERGVGGSIVTDFKPVNWAEWVQERNDEIFIMAQIEHVKAVED 158 (261)
T ss_dssp HHHHHHHHHTCCEEEETTCCSHHHHHHHHHHHSCTTTCCCCCCCGGGGTTCCCCHHHHHHHHHTTCEEEEEECCHHHHHT
T ss_pred HHHHHHHhcCCCEEEECCcCCHHHHHHHHHHhccCCCCCcCcccchhhhccccchhhHHhcCCCCeEEEEEECCHHHHHH
Confidence 488999999999999999999999999877763 23457899999999999999
Q ss_pred HHHHHhh--cCEEEEeCCCccccCCCC------CHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHH
Q 012943 324 LHSIISA--SDGAMVARGDLGAELPIE------DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIA 395 (453)
Q Consensus 324 ldeI~~~--sDgImIgRGDLg~elg~e------~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~na 395 (453)
+++|+++ .|+++||++||+.++|.. ++..++++++.+|+++|||+++.+ ..|..++ ...
T Consensus 159 ~~eIaa~~~vd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~aaG~~~g~~~---------~~~~~~~----~~~ 225 (261)
T 3qz6_A 159 IDSILAVQGVDAVIFGPRDLSNDLGIIGQTEHPKVYECYEKVYRAADRQGVVKGFFT---------AADAAKM----GWA 225 (261)
T ss_dssp HHHHHTSTTCCEEEECHHHHHHHTTCTTCTTCHHHHHHHHHHHHHHHHHTCEEEEEE---------SSCGGGG----HHH
T ss_pred HHHHhCCCCCCEEEECHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEe---------CCHHHHH----HHH
Confidence 9999965 899999999999999873 689999999999999999998753 3566552 256
Q ss_pred HHhCccEEEecCccc
Q 012943 396 VREGADAVMLSGETA 410 (453)
Q Consensus 396 v~~G~D~vmLs~ETA 410 (453)
+..|++.+.++.++.
T Consensus 226 ~~~G~~~~s~~~D~~ 240 (261)
T 3qz6_A 226 VERGAQMLLWSGDVA 240 (261)
T ss_dssp HHTTCCEEEEEEHHH
T ss_pred HHCCCCEEEEhhHHH
Confidence 788999988887753
No 15
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=99.65 E-value=2.4e-16 Score=153.70 Aligned_cols=126 Identities=25% Similarity=0.289 Sum_probs=105.4
Q ss_pred HHHHHhhhhcCCcEEEeccccCHHHHHHHHHHHH--------------------------hcCCCceEEEEecChhhhcc
Q 012943 270 WEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLK--------------------------SCNADIHVIVKIESADSIPN 323 (453)
Q Consensus 270 ~~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~--------------------------~~~~~i~IIakIET~~gv~N 323 (453)
-..|+++++.|+++|.+|||++++|++.+.+++. ..+.++.++++|||++|+.|
T Consensus 81 ~~~i~~~l~~g~~gI~~P~V~s~~ev~~~~~~~~~~p~g~Rg~~~~~~~~~~g~~~~~~~~~~~~~~v~~~IEt~~av~~ 160 (256)
T 1dxe_A 81 PVIIKRLLDIGFYNFLIPFVETKEEAELAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQGVDN 160 (256)
T ss_dssp HHHHHHHHHTTCCEEEESCCCSHHHHHHHHHTTSCTTTCCCCCCSSSGGGGGGTSTTHHHHHTTSCEEEEEECSHHHHHT
T ss_pred HHHHHHHHhcCCceeeecCcCCHHHHHHHHHHhcCCCCCccCCCcchhhhhcCchHHHHHhcCcccEEEEEECCHHHHHh
Confidence 3448888999999999999999999999887764 22457899999999999999
Q ss_pred HHHHHhh--cCEEEEeCCCccccCCC------CCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHH
Q 012943 324 LHSIISA--SDGAMVARGDLGAELPI------EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIA 395 (453)
Q Consensus 324 ldeI~~~--sDgImIgRGDLg~elg~------e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~na 395 (453)
+++|+++ +|+++||++||+.++|. +.+..++++++.+|+++|||+++.+ ..|. +...+
T Consensus 161 ~~eIa~~~~vd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~a~G~~~~v~~---------~d~~-----~~~~~ 226 (256)
T 1dxe_A 161 VDAIAATEGVDGIFVGPSDLAAALGHLGNASHPDVQKAIQHIFNRASAHGKPSGILA---------PVEA-----DARRY 226 (256)
T ss_dssp HHHHHTSTTCCEEEECHHHHHHHTTCTTCTTSHHHHHHHHHHHHHHHHTTCCEEEEC---------CSHH-----HHHHH
T ss_pred HHHHhCCCCCCEEEEChHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCceEEec---------CCHH-----HHHHH
Confidence 9999984 89999999999999997 3589999999999999999998632 2233 34467
Q ss_pred HHhCccEEEecCcc
Q 012943 396 VREGADAVMLSGET 409 (453)
Q Consensus 396 v~~G~D~vmLs~ET 409 (453)
+..|++.+.++.++
T Consensus 227 ~~~G~~~~s~~~d~ 240 (256)
T 1dxe_A 227 LEWGATFVAVGSDL 240 (256)
T ss_dssp HHTTCCEEEEEEHH
T ss_pred HHcCCCEEEechHH
Confidence 78888888877553
No 16
>1sgj_A Citrate lyase, beta subunit; trimer, TIM barrel, structural genomics, PSI, protein structure initiative; 1.84A {Deinococcus radiodurans} SCOP: c.1.12.5
Probab=99.61 E-value=1.8e-15 Score=149.49 Aligned_cols=130 Identities=11% Similarity=0.069 Sum_probs=109.4
Q ss_pred HhhHHHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh--cCEEEEeCCCcccc
Q 012943 267 DKDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA--SDGAMVARGDLGAE 344 (453)
Q Consensus 267 ekD~~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~--sDgImIgRGDLg~e 344 (453)
+++.+||+++++ |+++|.+|||++++++..+.+++...|.++.++++|||++|+.|+++|++. +|+++||++||+.+
T Consensus 81 ~~~~~dl~~~l~-g~~~i~lPkv~s~~~v~~~~~~l~~~g~~~~i~~~IEt~~av~~~~eIa~~~~vd~l~iG~~DL~~~ 159 (284)
T 1sgj_A 81 PYFEDDLSVLTP-ELSGVVVPKLEMGAEARQVAQMLQERSLPLPILAGLETGAGVWNAREIMEVPEVAWAYFGAEDYTTD 159 (284)
T ss_dssp TTHHHHGGGCCT-TSSEEEECSCCSHHHHHHHHHHHHHTTCCCCEEEEECSHHHHHTHHHHHTSTTEEEEEECHHHHHHH
T ss_pred HhHHHHHHHHhc-cCCEEEeCCCCCHHHHHHHHHHHHhcCCCeEEEEEecCHHHHHHHHHHHcCCCCcEEEECHHHHHHH
Confidence 678899999999 999999999999999999999998877789999999999999999999963 79999999999999
Q ss_pred CCC------CCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHH--HHHHHHHHHhCccEEEe
Q 012943 345 LPI------EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE--VSDIAIAVREGADAVML 405 (453)
Q Consensus 345 lg~------e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAE--v~Dv~nav~~G~D~vmL 405 (453)
+|. +.+..++++++.+|+++|||++-. + .+...-.+ ..+...+...|+|+-+.
T Consensus 160 lg~~~~~~~~~~~~a~~~iv~aa~a~G~~~i~~------v--~~~~~d~~~l~~~~~~~~~~Gf~Gk~~ 220 (284)
T 1sgj_A 160 LGGKRTPGGLEVLYARSQVALAARLTGVAALDI------V--VTALNDPETFRADAEQGRALGYSGKLC 220 (284)
T ss_dssp HTCCCCSSCGGGHHHHHHHHHHHHHHTCEEEEC------C--CCCCSCHHHHHHHHHHHHHTTCSEEEE
T ss_pred hCCCCCCChHHHHHHHHHHHHHHHHcCCCeeeC------C--cCCCCCHHHHHHHHHHHHhCCCCcccc
Confidence 998 579999999999999999998531 0 11111111 35567888999986554
No 17
>2xz9_A Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); thermophilic, PEP-utilising enzyme, transferase; 1.68A {Thermoanaerobacter tengcongensis} PDB: 2bg5_A 2xz7_A*
Probab=99.36 E-value=9e-13 Score=132.90 Aligned_cols=134 Identities=16% Similarity=0.152 Sum_probs=108.5
Q ss_pred CCCCCHhhHHHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHh-----------cCCCceEEEEecChhhhccHHHHHhh
Q 012943 262 LPSITDKDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKS-----------CNADIHVIVKIESADSIPNLHSIISA 330 (453)
Q Consensus 262 lp~ltekD~~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~-----------~~~~i~IIakIET~~gv~NldeI~~~ 330 (453)
-|.+...|.+.|..+.+.|.+.|.+|+|++++++..+++++.+ .+.++.++++|||+.|+.|+++|+++
T Consensus 117 ~p~~~~~ql~Ai~ra~~~G~~~ImvPmV~s~~E~~~a~~~v~~~~~~~r~~G~~~~~~~~vg~mIEtp~av~~~d~Ia~~ 196 (324)
T 2xz9_A 117 RPDIFKTQLRAILRASAYGNVQIMYPMISSVEEVRKANSILEEVKAELDREGVKYDKEIKVGIMVEIPSAAVTADILAKE 196 (324)
T ss_dssp CHHHHHHHHHHHHHHGGGSCEEEEECSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCTTCEEEEEECSHHHHHTHHHHTTT
T ss_pred chhhHHHHHHHHHHHHhCCCCEEEEcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEECcHHHHHHHHHHHHh
Confidence 3455566677777778889999999999999999888887742 12368999999999999999999999
Q ss_pred cCEEEEeCCCccc-cCCC---------------CCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHH
Q 012943 331 SDGAMVARGDLGA-ELPI---------------EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI 394 (453)
Q Consensus 331 sDgImIgRGDLg~-elg~---------------e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~n 394 (453)
+|+++||..||+. .+|. +.|..+.++++.+|+++|||+.+++++ .+.| ..+..
T Consensus 197 vD~~siGtnDLtq~~lg~dR~~~~~~~~~~~~~p~v~~ai~~vv~aar~aG~~vgvcge~------~~dp-----~~~~~ 265 (324)
T 2xz9_A 197 VDFFSIGTNDLTQYTLAVDRMNEHVKEYYQPFHPAILRLVKMVIDAAHKEGKFAAMCGEM------AGDP-----LAAVI 265 (324)
T ss_dssp CSEEEECHHHHHHHHTTCCTTCGGGGGGCCTTCHHHHHHHHHHHHHHHHTTCEEEECSGG------GGCH-----HHHHH
T ss_pred CcEEEECHHHHHHHHhCCCCCcccccccCCCCCHHHHHHHHHHHHHHHHHCCceeecCcc------CCCH-----HHHHH
Confidence 9999999999995 4442 358889999999999999999987653 2233 33457
Q ss_pred HHHhCccEEEec
Q 012943 395 AVREGADAVMLS 406 (453)
Q Consensus 395 av~~G~D~vmLs 406 (453)
++..|+|.+.++
T Consensus 266 l~~lG~~~~si~ 277 (324)
T 2xz9_A 266 LLGLGLDEFSMS 277 (324)
T ss_dssp HHHHTCCEEEEC
T ss_pred HHHCCCCEEEEC
Confidence 788999997655
No 18
>3qll_A Citrate lyase; beta barrel; 2.45A {Yersinia pestis}
Probab=99.31 E-value=4.6e-12 Score=127.32 Aligned_cols=132 Identities=20% Similarity=0.226 Sum_probs=106.8
Q ss_pred CHhhHHHHHhhhhcCC--cEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh---cCEEEEeCCC
Q 012943 266 TDKDWEDIKFGVDNQV--DFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA---SDGAMVARGD 340 (453)
Q Consensus 266 tekD~~DI~~a~~~gv--d~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~---sDgImIgRGD 340 (453)
|++..+||...++.|. |+|.+|+|++++++..+.+++...+.++.++++|||++|+.|+++|+++ .|++++|..|
T Consensus 113 t~~~~~Dl~~~l~~g~~~~gIvlPKvesa~~v~~~~~~l~~~~~~~~l~~~IET~~gv~~~~eIa~a~~~v~~l~~G~~D 192 (316)
T 3qll_A 113 TRAGIEDIHALLECGSLPDYLVLPKTESAAHLQILDRLMMFAGSDTRLIGIIESVRGLNAVESIAAATPKLAGLIFGAAD 192 (316)
T ss_dssp SHHHHHHHHHHHHSCCCCSEEEETTCCSHHHHHHHHHHTSCC--CCEEEEEECSHHHHHTHHHHHTSCTTEEEEEECHHH
T ss_pred CchhHHHHHHHHhCCCCCCEEEeCCCCCHHHHHHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHHHhcCCCceEEEECHHH
Confidence 5677789988888874 9999999999999999999998777789999999999999999999983 6899999999
Q ss_pred ccccCCCC----CHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHH--HHHHHHHHHhCccEEEe
Q 012943 341 LGAELPIE----DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE--VSDIAIAVREGADAVML 405 (453)
Q Consensus 341 Lg~elg~e----~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAE--v~Dv~nav~~G~D~vmL 405 (453)
|+.++|.. .+.++..+++.+|+++|++++-. - .+...-.| ..+...+...|+++-+.
T Consensus 193 L~~~lG~~~~~~~l~~ar~~iv~AaraaGi~~id~-v-------~~~~~D~~gl~~e~~~~r~lGf~Gk~~ 255 (316)
T 3qll_A 193 MAADIGAASTWEPLALARARLVSACAMNGIPAIDA-P-------FFDVHDVSGLQSETLRASDFGFSAKAA 255 (316)
T ss_dssp HHHHHTCCSSHHHHHHHHHHHHHHHHHHTCCEEEC-C-------CSCSSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHhCCCCCcHHHHHHHHHHHHHHHHcCCceeec-c-------ccCcCCHHHHHHHHHHHHHCCCCeEEe
Confidence 99999974 47788999999999999998431 1 11111111 45677888999987665
No 19
>1u5h_A CITE; TIM barrel, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC, lyase; 1.65A {Mycobacterium tuberculosis} SCOP: c.1.12.5 PDB: 1u5v_A* 1z6k_A
Probab=99.25 E-value=2e-11 Score=120.14 Aligned_cols=126 Identities=18% Similarity=0.085 Sum_probs=100.8
Q ss_pred CHhhHHHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh--cCEEEEeCCCccc
Q 012943 266 TDKDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA--SDGAMVARGDLGA 343 (453)
Q Consensus 266 tekD~~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~--sDgImIgRGDLg~ 343 (453)
|++-.+||+..++.|+++|.+|+|++++++..+. .+.++++|||++|+.|+++|+.. .|++++|+.||+.
T Consensus 70 ~~~~~~dl~~~~~~g~~gi~lPKv~s~~~v~~~~--------~~~i~~~IET~~~v~~~~eIaa~~~v~~l~~G~~Dl~~ 141 (273)
T 1u5h_A 70 TADQARDLEALAGTAYTTVMLPKAESAAQVIELA--------PRDVIALVETARGAVCAAEIAAADPTVGMMWGAEDLIA 141 (273)
T ss_dssp CHHHHHHHHHHHTSCCCEEEETTCCCHHHHHTTT--------TSEEEEEECSHHHHHTHHHHHHSTTEEEEEECHHHHHH
T ss_pred chHHHHHHHHHHhcCCCEEEeCCCCCHHHHHHHh--------hCCEEEEEeCHHHHHhHHHHhcCCCCcEEEecHHHHHH
Confidence 4566688998899999999999999999998653 68899999999999999999965 6899999999999
Q ss_pred cCCCC-----------CHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHH-HHHHHHHHHhCccEEEec
Q 012943 344 ELPIE-----------DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGADAVMLS 406 (453)
Q Consensus 344 elg~e-----------~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~D~vmLs 406 (453)
++|.. .+..+..+++.+|+++|++++-. - .......+. ..+...+...|+|+-++-
T Consensus 142 ~lG~~~~~~~~~~~~~~~~~a~~~iv~aaraaG~~aid~-v------~~~~~d~~gl~~~~~~~~~~Gf~Gk~~I 209 (273)
T 1u5h_A 142 TLGGSSSRRADGAYRDVARHVRSTILLAASAFGRLALDA-V------HLDILDVEGLQEEARDAAAVGFDVTVCI 209 (273)
T ss_dssp HHTCSCSBCTTSCBCHHHHHHHHHHHHHHHHTTCEEEEC-C------CSCTTCHHHHHHHHHHHHHHTCSEEEES
T ss_pred HhCCCCCCCccccccHHHHHHHHHHHHHHHHcCCCcccC-C------cCCCCCHHHHHHHHHHHHhCCCCceeec
Confidence 99862 26788899999999999988531 1 111111111 456778889999987763
No 20
>3qqw_A Putative citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 2.44A {Ralstonia eutropha}
Probab=99.25 E-value=1.6e-11 Score=124.16 Aligned_cols=133 Identities=13% Similarity=0.044 Sum_probs=102.3
Q ss_pred CHhhHHHHHhhhhc---CCcEEEeccccCHHHHHHHHHHHHhc----C--CCceEEEEecChhhhccHHHHHhh--cCEE
Q 012943 266 TDKDWEDIKFGVDN---QVDFYAVSFVKDAKVVHELKDYLKSC----N--ADIHVIVKIESADSIPNLHSIISA--SDGA 334 (453)
Q Consensus 266 tekD~~DI~~a~~~---gvd~I~lSfV~sa~dv~~v~~~L~~~----~--~~i~IIakIET~~gv~NldeI~~~--sDgI 334 (453)
|++-.+||...++. |+|+|.+|+|++++|+..+.+++... | ..+.++++|||++|+.|+++|++. .|++
T Consensus 94 t~~~~~DL~av~~~~~~g~dgI~LPKvesa~dv~~~~~~l~~~e~~~G~~~~i~l~~~IET~~gv~~~~eIaa~~rv~~L 173 (332)
T 3qqw_A 94 HPAWRQDVDIIVNGAGGRLAYITVPKATNSGQVAEVIRYIGDVAKRAGLDKPVPVHVLIETHGALRDVFQIAELPNIEVL 173 (332)
T ss_dssp STTHHHHHHHHHHHSTTCCCCEEECCCCSHHHHHHHHHHHHHHHHHTTCSSCCCEEEEECSHHHHHTHHHHTTSTTEEEE
T ss_pred ChHHHHHHHHHHhhcccCCCEEEeCCCCCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEecCHHHHHHHHHHhcCcCCCEE
Confidence 45566778776665 99999999999999999998888643 2 468899999999999999999954 6899
Q ss_pred EEeCCCccccCCCC---------------CHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHH-HHHHHHHH-H
Q 012943 335 MVARGDLGAELPIE---------------DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAV-R 397 (453)
Q Consensus 335 mIgRGDLg~elg~e---------------~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAE-v~Dv~nav-~ 397 (453)
++|++||+.++|.. .+..++.+++.+|+++|+++|-. + ........- ..+...+. .
T Consensus 174 ~~G~~DL~~~lg~~~~~~~~~~~g~~~~p~l~~ar~~vv~AAraaGi~~id~------v-~~d~~D~~gl~~~~~~~~~~ 246 (332)
T 3qqw_A 174 DFGLMDFVSGHHGAIPAAAMRSPGQFEHALLVRAKADMVAAALANGIVPAHN------V-CLNLKDAEVIASDACRARNE 246 (332)
T ss_dssp EECHHHHHHTTTTCSCGGGGSTTGGGTSHHHHHHHHHHHHHHHHTTCEEEEC------C-CSCSSCHHHHHHHHHHHHHH
T ss_pred EEcHHHHHHHhCCCccccccCCCCcccCHHHHHHHHHHHHHHHHhCCCcccC------C-cccccCHHHHHHHHHHHHHh
Confidence 99999999998762 16678899999999999997532 1 111111111 34566776 7
Q ss_pred hCccEEEe
Q 012943 398 EGADAVML 405 (453)
Q Consensus 398 ~G~D~vmL 405 (453)
.|+|+-+.
T Consensus 247 lGf~Gk~~ 254 (332)
T 3qqw_A 247 FGFLRMWS 254 (332)
T ss_dssp HCCCEEEE
T ss_pred CCCCcccc
Confidence 89997665
No 21
>3r4i_A Citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.24A {Burkholderia xenovorans}
Probab=99.15 E-value=1.5e-10 Score=117.25 Aligned_cols=158 Identities=10% Similarity=0.104 Sum_probs=108.5
Q ss_pred CHhhHHHHHhhhhc---CCcEEEeccccCHHHHHHHHHHHHhc----C--CCceEEEEecChhhhccHHHHHhh--cCEE
Q 012943 266 TDKDWEDIKFGVDN---QVDFYAVSFVKDAKVVHELKDYLKSC----N--ADIHVIVKIESADSIPNLHSIISA--SDGA 334 (453)
Q Consensus 266 tekD~~DI~~a~~~---gvd~I~lSfV~sa~dv~~v~~~L~~~----~--~~i~IIakIET~~gv~NldeI~~~--sDgI 334 (453)
|++-.+||...++. |+|+|.+|+|++++|+..+.+++... | ..+.++++|||++|+.|+++|++. .|++
T Consensus 93 t~~~~~DL~al~~~~~~g~~~I~LPKves~~dv~~~~~~l~~~e~~~G~~~~~~l~~~IET~~gv~~~~eIAa~~rv~~L 172 (339)
T 3r4i_A 93 HAHWRDDVRLILRAAKRAPAYITLPKIRHVHDAAEMVAFIEATRRELGIAQPVPVQLLVETHGALTRVFDLAALPGVEAL 172 (339)
T ss_dssp STTHHHHHHHHHHHCSSCCSCEEECC-CCHHHHHHHHHHHHHHHHHTTCSSCCCEEEEECSHHHHHTHHHHHTCTTEEEE
T ss_pred ccHHHHHHHHhhhhccCCCCEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeccHHHHHhHHHHHcCcCCCEE
Confidence 34556777766654 89999999999999999998888643 2 468899999999999999999954 6899
Q ss_pred EEeCCCccccCCCC---------------CHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHH-HHHHHHHH-H
Q 012943 335 MVARGDLGAELPIE---------------DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAV-R 397 (453)
Q Consensus 335 mIgRGDLg~elg~e---------------~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAE-v~Dv~nav-~ 397 (453)
++|.+||+.++|.. .+..++.+++.+|+++|++++-. +....-..+- ..+...+. .
T Consensus 173 ~~G~~DL~~~lg~~~~~~~~~~~~~~~~p~~~~a~~~iv~AAraaGi~~id~-------v~~d~~D~~gl~~~~~~~~~~ 245 (339)
T 3r4i_A 173 SFGLMDFVSAHDGAIPDTAMRSPGQFDHPLVRRAKLEISAACHAYGKVPSHN-------VSTEVRDMSVVANDAARARNE 245 (339)
T ss_dssp EECHHHHHHTTTTSSCGGGGSTTHHHHSHHHHHHHHHHHHHHHHTTCEEEEC-------CCCCSSCHHHHHHHHHHHHHT
T ss_pred EECHHHHHHHhCCCcCccccCCCccccCHHHHHHHHHHHHHHHHcCCCCccC-------CCcCCCChHHHHHHHHHHHHh
Confidence 99999999999752 15678899999999999998531 0111111111 23445554 6
Q ss_pred hCccEEEecCc-------ccCCCCHHHHHHHHHHHHHHHhc
Q 012943 398 EGADAVMLSGE-------TAHGKFPLKAVKVMHTVALRTES 431 (453)
Q Consensus 398 ~G~D~vmLs~E-------TA~G~yP~eaV~~m~~I~~~aE~ 431 (453)
.|+++-+.-.= .+.-.- -+-|.+-++|+..+|+
T Consensus 246 lGf~Gk~~IHP~QI~~in~~f~Ps-~~ei~~A~~il~a~~~ 285 (339)
T 3r4i_A 246 FGYTRMWSIHPAQIEAIVAAFAPR-DEEITTATEILLAAQS 285 (339)
T ss_dssp TCCSEEEESSHHHHHHHHHHTSCC-THHHHHHHHHHHHHHH
T ss_pred CCCCcceeeCHHHHHHHHHHhCCC-HHHHHHHHHHHHHHHH
Confidence 78886554210 011111 2456667777766553
No 22
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis}
Probab=99.15 E-value=3.9e-11 Score=133.72 Aligned_cols=132 Identities=18% Similarity=0.177 Sum_probs=109.2
Q ss_pred CCHhhHHHHHhhhh-cC--CcEEEeccccCHHHHHHHHHHHHhcCC----C-ceEEEEecChhhhccHHHHHhhcCEEEE
Q 012943 265 ITDKDWEDIKFGVD-NQ--VDFYAVSFVKDAKVVHELKDYLKSCNA----D-IHVIVKIESADSIPNLHSIISASDGAMV 336 (453)
Q Consensus 265 ltekD~~DI~~a~~-~g--vd~I~lSfV~sa~dv~~v~~~L~~~~~----~-i~IIakIET~~gv~NldeI~~~sDgImI 336 (453)
+.+.+.+.|..+.+ .| .+.|.+|||+++++++.+++++...+. + +.++++|||+.|+.|+++|++++|+++|
T Consensus 622 ~~~~ql~Ai~ra~~~~G~~~~~ImvP~V~t~~E~~~~~~~l~~~g~~~~~~~~~vg~MIEtp~a~~~ad~ia~~vD~~si 701 (794)
T 2ols_A 622 CFALECKALKRVRDEMGLTNVEIMIPFVRTLGEAEAVVKALKENGLERGKNGLRLIMMCELPSNAVLAEQFLQYFDGFSI 701 (794)
T ss_dssp HHHHHHHHHHHHHHTSCCTTEEEEECCCCSHHHHHHHHHHHHHTTCCTTGGGCCEEEEECSHHHHHTHHHHHTTSSEEEE
T ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCCCCHHHHHHHHHHHHhcCcccCccCCEEEEEECcHHHHHHHHHHHHhCCEEEE
Confidence 44556666767777 67 789999999999999999999986652 3 8899999999999999999999999999
Q ss_pred eCCCcccc-CCCC---------------CHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCc
Q 012943 337 ARGDLGAE-LPIE---------------DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGA 400 (453)
Q Consensus 337 gRGDLg~e-lg~e---------------~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~ 400 (453)
|..||+.. +|+. .|..+.++++.+|+++||++.++.|+-- ..|. .+..++..|+
T Consensus 702 GtnDLtq~tlg~~R~~~~~~~~~~~~~p~v~~~i~~~v~aar~~g~~vgicGe~~~-----~dp~-----~~~~~~~~G~ 771 (794)
T 2ols_A 702 GSNDMTQLTLGLDRDSGLVSESFDERNPAVKVMLHLAISACRKQNKYVGICGQGPS-----DHPD-----FAKWLVEEGI 771 (794)
T ss_dssp EHHHHHHHHHTCCTTCTTTGGGCCTTSHHHHHHHHHHHHHHHTTTCEEEEESSHHH-----HCHH-----HHHHHHHHTC
T ss_pred CHHHHHHHHhCCCCCcchhccccCCCCHHHHHHHHHHHHHHHHhCCEEEEecccCC-----CCHH-----HHHHHHHCCC
Confidence 99999998 7853 4888999999999999999999866311 0232 2457788999
Q ss_pred cEEEec
Q 012943 401 DAVMLS 406 (453)
Q Consensus 401 D~vmLs 406 (453)
|.+.++
T Consensus 772 ~~~s~~ 777 (794)
T 2ols_A 772 ESVSLN 777 (794)
T ss_dssp CEEEEC
T ss_pred CEEEEC
Confidence 999886
No 23
>2hwg_A Phosphoenolpyruvate-protein phosphotransferase; enzyme I, phosphoenolpyruvate:sugar phosphotransferase system, PTS; HET: NEP; 2.70A {Escherichia coli} PDB: 2kx9_A 2xdf_A 2l5h_A
Probab=99.08 E-value=2.2e-10 Score=123.44 Aligned_cols=133 Identities=13% Similarity=0.057 Sum_probs=107.3
Q ss_pred CCCCHhhHHHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHh-------cC----CCceEEEEecChhhhccHHHHHhhc
Q 012943 263 PSITDKDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKS-------CN----ADIHVIVKIESADSIPNLHSIISAS 331 (453)
Q Consensus 263 p~ltekD~~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~-------~~----~~i~IIakIET~~gv~NldeI~~~s 331 (453)
|.+...+.+.|..+...|...|.+|+|.+++++..+++.+.+ .| .++.+.++||||.|+.++++|++.+
T Consensus 367 p~if~~QlrAi~rA~~~G~~~Im~PmV~t~~E~~~a~~~v~~~~~~l~~~G~~~~~~~~vg~MIE~P~a~~~ad~ia~~v 446 (575)
T 2hwg_A 367 REILRDQLRAILRASAFGKLRIMFPMIISVEEVRALRKEIEIYKQELRDEGKAFDESIEIGVMVETPAAATIARHLAKEV 446 (575)
T ss_dssp HHHHHHHHHHHHHHTTSSCEEEEESSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCTTCEEEEEECSHHHHHTHHHHHTTC
T ss_pred hHHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEECcHHHHHHHHHHHHhC
Confidence 444445556677777789999999999999999888887742 22 3688999999999999999999999
Q ss_pred CEEEEeCCCccc----------cCCC------CCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHH
Q 012943 332 DGAMVARGDLGA----------ELPI------EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIA 395 (453)
Q Consensus 332 DgImIgRGDLg~----------elg~------e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~na 395 (453)
|+++||..||+. .++. +.|..+.++++.+|+++|||+.++.+ ..+.|..++ .+
T Consensus 447 Df~siGtNDLtqy~la~dR~~~~l~~~~dp~~paVl~li~~vv~aa~~~g~~vgvCGe------~agdp~~~~-----~l 515 (575)
T 2hwg_A 447 DFFSIGTNDLTQYTLAVDRGNDMISHLYQPMSPSVLNLIKQVIDASHAEGKWTGMCGE------LAGDERATL-----LL 515 (575)
T ss_dssp SEEEECHHHHHHHHHTCCTTCGGGGGGCCSSSHHHHHHHHHHHHHHHHTTCEEEECST------TTTCTTTHH-----HH
T ss_pred CEEEECHHHHHHHHhCcCCCccccccccCCCCHHHHHHHHHHHHHHHHhCCeEEEeCC------CCCCHHHHH-----HH
Confidence 999999999998 4442 45888999999999999999998765 234565433 67
Q ss_pred HHhCccEEEec
Q 012943 396 VREGADAVMLS 406 (453)
Q Consensus 396 v~~G~D~vmLs 406 (453)
+..|.|.+-++
T Consensus 516 ~~lG~~~~S~~ 526 (575)
T 2hwg_A 516 LGMGLDEFSMS 526 (575)
T ss_dssp HHTTCCEEEEC
T ss_pred HHCCCCEEEEC
Confidence 88999997665
No 24
>3oyz_A Malate synthase; TIM barrel, transferase; HET: ACO; 1.95A {Haloferax volcanii} PDB: 3oyx_A* 3pug_A
Probab=99.06 E-value=3.8e-10 Score=117.10 Aligned_cols=133 Identities=10% Similarity=0.070 Sum_probs=106.0
Q ss_pred CHh-hHHHHHhhhh------cCCcEEEeccccCHHHHHHHHHHHHhc----C---CCceEEEEecChhh---hccHHHHH
Q 012943 266 TDK-DWEDIKFGVD------NQVDFYAVSFVKDAKVVHELKDYLKSC----N---ADIHVIVKIESADS---IPNLHSII 328 (453)
Q Consensus 266 tek-D~~DI~~a~~------~gvd~I~lSfV~sa~dv~~v~~~L~~~----~---~~i~IIakIET~~g---v~NldeI~ 328 (453)
|++ ..+||...+. .++|+|.+|+|++++++..+.++|... | ..+.++++|||++| +.|+++|+
T Consensus 94 T~~~~~~DL~al~~~~~~a~~~~dgIvLPKvesa~dV~~l~~~L~~~E~~~Gl~~G~i~lialIETa~g~~~L~na~eIA 173 (433)
T 3oyz_A 94 TRYQGFQHMLDITDPERGAVEHIHGFVIPEVGGIDDWKKADEFFTIVEHEHGLDEGSLAMSVIIESGEAELAMGDLRDEM 173 (433)
T ss_dssp HHHHHHHHHHHHTCGGGSCGGGCCEEEECSCCSHHHHHHHHHHHHHHHHHTTCCTTCSEEEEEECSHHHHHHGGGHHHHH
T ss_pred ChhccHHHHHHHhccccccccCCCEEEeCCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEEEeChhHHHHHHHHHHHH
Confidence 566 6788888776 789999999999999999998888542 2 26899999999999 99999999
Q ss_pred hhc-------CEEEEeCCCccccCCCC-------CHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHH-HHHHH
Q 012943 329 SAS-------DGAMVARGDLGAELPIE-------DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIA 393 (453)
Q Consensus 329 ~~s-------DgImIgRGDLg~elg~e-------~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAE-v~Dv~ 393 (453)
+++ +++++|+.||+.++|.. .+..+..+++.+|+++|++++-. +....-..+- ..+..
T Consensus 174 aasr~~~pRV~gL~~G~~DLsasLG~~~~~~~~~el~~ARs~IVlAARAaGi~aIDg-------V~~di~D~egL~~ea~ 246 (433)
T 3oyz_A 174 GKPTNNLERLFLLVDGEVDYTKDMRAMTPTGELPAWPELRHNTSRGASAAGCVAVDG-------PYDDIRDVEGYRERMT 246 (433)
T ss_dssp HCTTCCGGGEEEEEECHHHHHHHHTCCCTTCCCCCCHHHHHHHHHHHHHHTCEEEEC-------CCCCTTCHHHHHHHHH
T ss_pred hhhccCCCCeEEEEECHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHhCCCcccc-------cccCCCCHHHHHHHHH
Confidence 763 69999999999999873 47888999999999999987542 1111111111 45678
Q ss_pred HHHHhCccEEEe
Q 012943 394 IAVREGADAVML 405 (453)
Q Consensus 394 nav~~G~D~vmL 405 (453)
.+...|+++-+.
T Consensus 247 ~ar~lGF~GK~~ 258 (433)
T 3oyz_A 247 DNQAKGMLGIWS 258 (433)
T ss_dssp HHHTTTCCEEEE
T ss_pred HHHhCCCCceEe
Confidence 888999999876
No 25
>2wqd_A Phosphoenolpyruvate-protein phosphotransferase; kinase, cytoplasm, transport, magnesium, PEP- utilising enzyme, phosphotransferase system; 2.40A {Staphylococcus aureus} PDB: 2hro_A
Probab=99.05 E-value=2.7e-10 Score=122.63 Aligned_cols=128 Identities=14% Similarity=0.044 Sum_probs=103.6
Q ss_pred hhHHHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHh-----------cCCCceEEEEecChhhhccHHHHHhhcCEEEE
Q 012943 268 KDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKS-----------CNADIHVIVKIESADSIPNLHSIISASDGAMV 336 (453)
Q Consensus 268 kD~~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~-----------~~~~i~IIakIET~~gv~NldeI~~~sDgImI 336 (453)
-+.+.|..+...|...|.+|+|.++++++.+++.+.+ .+.++.+.++||||.|+.++++|++.+|+++|
T Consensus 374 ~QlrAi~rA~~~G~~~Im~PmV~s~~E~~~a~~~v~~~~~~l~~~G~~~~~~~~vg~MIE~P~a~~~ad~ia~~vDf~si 453 (572)
T 2wqd_A 374 PQLRALLRASVYGKLNIMFPMVATINEFREAKAILLEEKENLKNEGHDISDDIELGIMVEIPATAALADVFAKEVDFFSI 453 (572)
T ss_dssp HHHHHHHHHTTTSCEEEEESCCCSHHHHHHHHHHHHHHHHHHHHHTCCCCSCCEEEEEECCHHHHHTHHHHHHHCSEEEE
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEEccHHHHHHHHHHHHhCCEEEE
Confidence 3445566677789999999999999999988877642 12468899999999999999999999999999
Q ss_pred eCCCcccc-CCC---------------CCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCc
Q 012943 337 ARGDLGAE-LPI---------------EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGA 400 (453)
Q Consensus 337 gRGDLg~e-lg~---------------e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~ 400 (453)
|..||+.. +|. +.|..+.++++.+|+++|||+.++.+ ..+.|..++ .++..|.
T Consensus 454 GtNDLtQ~~lg~dR~~~~v~~~~dp~~paVl~li~~vv~aa~~~g~~vgiCGe------~agdp~~~~-----~l~~lG~ 522 (572)
T 2wqd_A 454 GTNDLIQYTLAADRMSERVSYLYQPYNPSILRLVKQVIEASHKEGKWTGMCGE------MAGDETAIP-----LLLGLGL 522 (572)
T ss_dssp CHHHHHHHHHTCCSSSGGGGGGCCTTCHHHHHHHHHHHHHHHHTTCEEEECSG------GGGCTTTHH-----HHHHHTC
T ss_pred CHHHHHHHHhccCCCccccccccCCCCHHHHHHHHHHHHHHHHhCCeEEEeCC------ccCCHHHHH-----HHHHCCC
Confidence 99999832 231 35888999999999999999998765 224565544 6788999
Q ss_pred cEEEec
Q 012943 401 DAVMLS 406 (453)
Q Consensus 401 D~vmLs 406 (453)
|.+.++
T Consensus 523 ~~~S~~ 528 (572)
T 2wqd_A 523 DEFSMS 528 (572)
T ss_dssp CEEEEC
T ss_pred CEEEec
Confidence 998876
No 26
>1vbg_A Pyruvate,orthophosphate dikinase; transferase, maize, riken structural genomics/proteomics INI RSGI, structural genomics; 2.30A {Zea mays} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1vbh_A*
Probab=98.58 E-value=6.4e-08 Score=108.72 Aligned_cols=116 Identities=16% Similarity=0.105 Sum_probs=94.9
Q ss_pred CCc---EEEeccccCHHHHHHHHHHHHhc--------C--CCceEEEEecChhhhccHHHHHhhcCEEEEeCCCcc-ccC
Q 012943 280 QVD---FYAVSFVKDAKVVHELKDYLKSC--------N--ADIHVIVKIESADSIPNLHSIISASDGAMVARGDLG-AEL 345 (453)
Q Consensus 280 gvd---~I~lSfV~sa~dv~~v~~~L~~~--------~--~~i~IIakIET~~gv~NldeI~~~sDgImIgRGDLg-~el 345 (453)
|.+ .|.+|||++++++..+++++.+. | .++.|+++||||.|+.++++|++.+|++.||..||+ ..+
T Consensus 701 G~~~~~~ImiP~V~t~~E~~~~~~~i~~~~~~~~~~~G~~~~~~vg~MIEtP~a~l~adeIA~~vDf~siGtNDLtQ~~l 780 (876)
T 1vbg_A 701 GVQVFPEIMVPLVGTPQELGHQVTLIRQVAEKVFANVGKTIGYKVGTMIEIPRAALVADEIAEQAEFFSFGTNDLTQMTF 780 (876)
T ss_dssp TCCCEEEEEECSCCSHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEECSHHHHHTHHHHTTTCSEEEECHHHHHHHHH
T ss_pred CCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEEccHHHHHHHHHHHHhCCEEEECHHHHHHHHh
Confidence 755 68999999999999998776422 3 358899999999999999999999999999999998 444
Q ss_pred CC----------------------------CCHHHHHHHHHHHHHHc--CCCEEEEechhhhhccCCCCchHHHHHHHHH
Q 012943 346 PI----------------------------EDVPLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIA 395 (453)
Q Consensus 346 g~----------------------------e~v~~aqk~Ii~~c~~a--Gkpvi~aTqmLeSM~~~~~PtrAEv~Dv~na 395 (453)
|+ +.|..+.++++++|+++ |+++.++.| ....|.-++ -.
T Consensus 781 g~dR~~~~~~~~~~~~~~i~~~dp~~~ld~paV~~li~~~~~~~~~~~~g~~vgiCGe------~~gdP~~~~-----~l 849 (876)
T 1vbg_A 781 GYSRDDVGKFIPVYLAQGILQHDPFEVLDQRGVGELVKFATERGRKARPNLKVGICGE------HGGEPSSVA-----FF 849 (876)
T ss_dssp TCCTTTGGGTHHHHHHTTSCSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEEESG------GGGSHHHHH-----HH
T ss_pred CCCCCchhhhHHHHhhcccccCCcccccchHHHHHHHHHHHHHHHHhCCCCEEEEcCC------cCCCHHHHH-----HH
Confidence 43 34777889999999998 999999876 223555443 67
Q ss_pred HHhCccEEEec
Q 012943 396 VREGADAVMLS 406 (453)
Q Consensus 396 v~~G~D~vmLs 406 (453)
+..|.|.+-+|
T Consensus 850 ~~~Gl~~vS~s 860 (876)
T 1vbg_A 850 AKAGLDYVSCS 860 (876)
T ss_dssp HHTTCSEEEEC
T ss_pred HHcCCCEEEEC
Confidence 88999999887
No 27
>1kbl_A PPDK, pyruvate phosphate dikinase; transferase, phosphotransferase; 1.94A {Clostridium symbiosum} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1kc7_A* 1dik_A 1ggo_A 1jde_A 2dik_A 2r82_A 2fm4_A
Probab=98.47 E-value=1.8e-07 Score=104.97 Aligned_cols=116 Identities=17% Similarity=0.181 Sum_probs=94.9
Q ss_pred CCc---EEEeccccCHHHHHHHHHHHHhc--------C--CCceEEEEecChhhhccHHHHHhhcCEEEEeCCCcc-ccC
Q 012943 280 QVD---FYAVSFVKDAKVVHELKDYLKSC--------N--ADIHVIVKIESADSIPNLHSIISASDGAMVARGDLG-AEL 345 (453)
Q Consensus 280 gvd---~I~lSfV~sa~dv~~v~~~L~~~--------~--~~i~IIakIET~~gv~NldeI~~~sDgImIgRGDLg-~el 345 (453)
|.+ .|.+|||++++++..+++++.+. | .++.|+++||||.|+.++++|++.+|++.||..||. ..+
T Consensus 695 G~~~~~~ImiP~V~t~~E~~~~~~~i~~~~~~~~~~~g~~~~~~vg~MIEtP~a~l~ad~iA~~vdf~siGtNDLtQ~~l 774 (873)
T 1kbl_A 695 GIDIVPEIMIPLVGEKKELKFVKDVVVEVAEQVKKEKGSDMQYHIGTMIEIPRAALTADAIAEEAEFFSFGTNDLTQMTF 774 (873)
T ss_dssp CCCCCCEEEECSCCSHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEECSHHHHHTHHHHTTTCSEEEECHHHHHHHHH
T ss_pred CCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEEccHHHHHHHHHHHHhCCEEEECHHHHHHHHh
Confidence 755 68999999999999998777532 3 358899999999999999999999999999999998 555
Q ss_pred CC----------------------------CCHHHHHHHHHHHHHHc--CCCEEEEechhhhhccCCCCchHHHHHHHHH
Q 012943 346 PI----------------------------EDVPLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIA 395 (453)
Q Consensus 346 g~----------------------------e~v~~aqk~Ii~~c~~a--Gkpvi~aTqmLeSM~~~~~PtrAEv~Dv~na 395 (453)
|+ +.|..+.++++++|+++ |+++.++.| ..+.|.-++ -.
T Consensus 775 g~dR~~~~~~~~~~~~~~i~~~dp~~~ld~paV~~li~~~~~~~~~~~~g~~vgiCGe------~~gdP~~~~-----~l 843 (873)
T 1kbl_A 775 GFSRDDAGKFLDSYYKAKIYESDPFARLDQTGVGQLVEMAVKKGRQTRPGLKCGICGE------HGGDPSSVE-----FC 843 (873)
T ss_dssp TCCHHHHHHHHHHHHHTTSCSSCTTTSCCTTTHHHHHHHHHHHHHHHCTTCEEEECSG------GGGSHHHHH-----HH
T ss_pred CCCCCchhhhHHHHHhccccccCchhhhchHHHHHHHHHHHHHHHHhCCCCeEEECCC------CCCCHHHHH-----HH
Confidence 54 34667889999999998 899999876 223555443 67
Q ss_pred HHhCccEEEec
Q 012943 396 VREGADAVMLS 406 (453)
Q Consensus 396 v~~G~D~vmLs 406 (453)
+..|.|.+-+|
T Consensus 844 ~~~Gl~~vS~s 854 (873)
T 1kbl_A 844 HKVGLNYVSCS 854 (873)
T ss_dssp HHTTCSEEEEC
T ss_pred HHcCCCEEEEC
Confidence 88999999777
No 28
>3cuz_A MSA, malate synthase A; TIM barrel, cytoplasm, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.04A {Escherichia coli} PDB: 3cv1_A 3cv2_A*
Probab=98.10 E-value=1e-05 Score=86.27 Aligned_cols=135 Identities=10% Similarity=0.107 Sum_probs=95.1
Q ss_pred hhHHHHHhhhhcC-CcEEEeccccCHHHHHHHHHHHHhc----C---CCceEEEEecChhhhccHHHHHhh----cCEEE
Q 012943 268 KDWEDIKFGVDNQ-VDFYAVSFVKDAKVVHELKDYLKSC----N---ADIHVIVKIESADSIPNLHSIISA----SDGAM 335 (453)
Q Consensus 268 kD~~DI~~a~~~g-vd~I~lSfV~sa~dv~~v~~~L~~~----~---~~i~IIakIET~~gv~NldeI~~~----sDgIm 335 (453)
+-..|++..+..| .++|.+|++++++++..+.+.+... | ..+++++.|||+.|+.|++||+.+ +.|+.
T Consensus 193 ~~~~Dl~~l~~~g~g~~i~LPK~es~~Ev~~~~~~f~~~E~~lGlp~gtiki~vlIET~~a~~n~~eIa~al~~rv~gLn 272 (532)
T 3cuz_A 193 YFFHNYQALLAKGSGPYFYLPKTQSWQEAAWWSEVFSYAEDRFNLPRGTIKATLLIETLPAVFQMDEILHALRDHIVGLN 272 (532)
T ss_dssp HHHHHHHHHHHTTCCCEEEECCCCCHHHHHHHHHHHHHHHHHTTCCTTCSEEEEECCSHHHHTSHHHHHHHTTTTEEEEE
T ss_pred HHHHHHHHHHcCCCCCeEEccCCCCHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeccHHHHHhHHHHHHhccCCceEEE
Confidence 3445565544433 4999999999999999988887532 2 358899999999999999999975 35999
Q ss_pred EeCCCccccCCC-------------------CCHHHHHHHHH-HHHHHcCCCEEEE-echhhhhccCCCCch--H----H
Q 012943 336 VARGDLGAELPI-------------------EDVPLLQEDII-RRCRSMQKPVIVA-TNMLESMIDHPTPTR--A----E 388 (453)
Q Consensus 336 IgRGDLg~elg~-------------------e~v~~aqk~Ii-~~c~~aGkpvi~a-TqmLeSM~~~~~Ptr--A----E 388 (453)
+|+.|+..++.- ..+..+..+++ .+|+++|++.|-. +.++. ...|.. + =
T Consensus 273 ~G~~Dy~~s~i~~~~~~~~~~lpdr~~~~~~~~~l~Ay~~llv~ac~a~G~~aIdGm~a~~p----~kD~e~~~~~~~~l 348 (532)
T 3cuz_A 273 CGRWDYIFSYIKTLKNYPDRVLPDRQAVTMDKPFLNAYSRLLIKTCHKRGAFAMGGMAAFIP----SKDEEHNNQVLNKV 348 (532)
T ss_dssp CCSHHHHHHHHHHTTTCGGGCCCCGGGCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEECBCC----CSSGGGCHHHHHHH
T ss_pred cCHHHHHHHHHhhcccCCCccCccccccccchHHHHHHHHHHHHHHHHcCCCCccCccccCC----CCChhHHHHHHHHH
Confidence 999999877610 11455666665 9999999987641 11111 112221 1 1
Q ss_pred HHHHHHHHHhCccEEEec
Q 012943 389 VSDIAIAVREGADAVMLS 406 (453)
Q Consensus 389 v~Dv~nav~~G~D~vmLs 406 (453)
..|.......|+|+-+.-
T Consensus 349 ~~dk~~~~~~GfdGkwvi 366 (532)
T 3cuz_A 349 KADKSLEANNGHDGTWIA 366 (532)
T ss_dssp HHHHHHHHHHTCSEEEES
T ss_pred HHHHHHHHHCCCCccccC
Confidence 455678888999998874
No 29
>3cux_A Malate synthase; TIM barrel, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.70A {Bacillus anthracis}
Probab=98.01 E-value=9.4e-06 Score=86.39 Aligned_cols=125 Identities=16% Similarity=0.186 Sum_probs=88.1
Q ss_pred hcCCcEEEeccccCHHHHHHHHHHHHhc----C---CCceEEEEecChhhhccHHHHHhh----cCEEEEeCCCccccCC
Q 012943 278 DNQVDFYAVSFVKDAKVVHELKDYLKSC----N---ADIHVIVKIESADSIPNLHSIISA----SDGAMVARGDLGAELP 346 (453)
Q Consensus 278 ~~gvd~I~lSfV~sa~dv~~v~~~L~~~----~---~~i~IIakIET~~gv~NldeI~~~----sDgImIgRGDLg~elg 346 (453)
..|+ +|.+|++++++++..+.+++... | ..+++.+.|||+.|+-|++||+.+ +.|+..|+.|+..+++
T Consensus 202 ~~gp-yi~LPK~es~~Ev~~~~~lf~~~E~~lGlp~gtIki~vlIET~~a~~n~~eI~~a~~~rv~gLn~G~~Dy~~s~i 280 (528)
T 3cux_A 202 GSGP-YFYLPKMESYLEARLWNDVFVFAQKYIGIPNGTIKATVLLETIHASFEMDEILYELKDHSAGLNCGRWDYIFSFL 280 (528)
T ss_dssp TCCC-EEEECCCCSHHHHHHHHHHHHHHHHHHTCCTTCCEEEEEECSHHHHTSHHHHHHHTGGGEEEEEECSHHHHHHHH
T ss_pred CCCC-EEEccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEEeCCHHHHHhHHHHHHhccCceeEEecCHHHHHHHhh
Confidence 4576 99999999999999988887532 2 368999999999999999999966 3599999999987764
Q ss_pred C------C--------------CHHHHHHHHHHHHHHcCCCEEEEechhhhhccC-CCCc------hHHHHHHHHHHHhC
Q 012943 347 I------E--------------DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDH-PTPT------RAEVSDIAIAVREG 399 (453)
Q Consensus 347 ~------e--------------~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~-~~Pt------rAEv~Dv~nav~~G 399 (453)
. + -+....+.++.+|+++|++.|-. |- .++.. ..|. ..=..|-.....+|
T Consensus 281 ~t~~~~~~~vlpdR~~v~~~~p~~~ay~~~lV~ac~a~G~~aIgG--m~-a~ip~~~D~~~n~~~~~~~~~dk~~~~~~G 357 (528)
T 3cux_A 281 KAFRNHNEFLLPDRAQVTMTAPFMRAYSLKVIQTCHRRNAPAIGG--MA-AQIPIKNNPEANEAAFEKVRADKEREALDG 357 (528)
T ss_dssp HHTTTCTTCCCCCGGGCCTTSHHHHHHHHHHHHHHHHTTCCEEC----------------------CHHHHHHHHHHHHT
T ss_pred hhccCCccccchhhhhcccccHHHHHHHHHHHHHHHHcCCCCccc--cc-ccCcCcCChHHHHHHHHHHHHHHHHHHhCC
Confidence 1 1 13344567889999999987641 10 11100 1121 01145567788899
Q ss_pred ccEEEec
Q 012943 400 ADAVMLS 406 (453)
Q Consensus 400 ~D~vmLs 406 (453)
+|+-+.-
T Consensus 358 fdGkwvi 364 (528)
T 3cux_A 358 HDGTWVA 364 (528)
T ss_dssp CSBEEES
T ss_pred CCccccc
Confidence 9998874
No 30
>1p7t_A MSG, malate synthase G; TIM barrel, glyoxylate cycle, acetyl-COA, cysteine-sulfenic lyase; HET: ACO PG4; 1.95A {Escherichia coli str} SCOP: c.1.13.1 PDB: 1y8b_A 1d8c_A* 2jqx_A
Probab=97.91 E-value=1.4e-05 Score=86.95 Aligned_cols=133 Identities=14% Similarity=0.045 Sum_probs=95.1
Q ss_pred hhHHHHHhhhhc--CCcEEEeccccCHHHHHHHHHHHHhc----C---CCceEEEEecChhhhccHHHHHhh----cCEE
Q 012943 268 KDWEDIKFGVDN--QVDFYAVSFVKDAKVVHELKDYLKSC----N---ADIHVIVKIESADSIPNLHSIISA----SDGA 334 (453)
Q Consensus 268 kD~~DI~~a~~~--gvd~I~lSfV~sa~dv~~v~~~L~~~----~---~~i~IIakIET~~gv~NldeI~~~----sDgI 334 (453)
.-..|++..+.. |.++|.+|++++++++..+.+++... | ..++++++|||+.|+.|++||+.. +.|+
T Consensus 370 ~~~hDl~al~~sg~G~~yIvLPKmespeEV~~~~~lf~~~E~~lGlp~gTIKi~vLIET~ra~~nl~EI~~aa~~Rv~gL 449 (731)
T 1p7t_A 370 IALYDLKVQKNSRTGSVYIVKPKMHGPQEVAFANKLFTRIETMLGMAPNTLKMGIMDEERRTSLNLRSCIAQARNRVAFI 449 (731)
T ss_dssp HHHHHHHHCSSCSSSCEEEEECSCCSHHHHHHHHHHHHHHHHHTTCCTTCEEEEEEECSHHHHTTHHHHHHTTTTTEEEE
T ss_pred HHHhhHHHHhhCCCCCcEEEeCCCCCHHHHHHHHHHHHHHHHhhCCCCCceEEEEEECCHHHHHhHHHHHHhhccceEEE
Confidence 345677665543 58999999999999999988887532 2 368899999999999999999853 3599
Q ss_pred EEeCCCccccC-CCC---------------CHHHH-HHHHHH---HHHHcCCCEEEEechhhhhccCCCCchHH--HHHH
Q 012943 335 MVARGDLGAEL-PIE---------------DVPLL-QEDIIR---RCRSMQKPVIVATNMLESMIDHPTPTRAE--VSDI 392 (453)
Q Consensus 335 mIgRGDLg~el-g~e---------------~v~~a-qk~Ii~---~c~~aGkpvi~aTqmLeSM~~~~~PtrAE--v~Dv 392 (453)
..|+.|+..++ +.. .+..+ ....+. +|+++|++.|-- -|-. .|..-+ ..+-
T Consensus 450 n~G~~Dyt~d~I~t~~~~~~~vR~~~t~~~~~~~AY~r~~V~~gLAcraaG~~aIgk-----Gm~a--~p~dmeg~~~dk 522 (731)
T 1p7t_A 450 NTGFLDRTGDEMHSVMEAGPMLRKNQMKSTPWIKAYERNNVLSGLFCGLRGKAQIGK-----GMWA--MPDLMADMYSQK 522 (731)
T ss_dssp EECHHHHHHHHHHHTGGGSCBCCGGGSTTCHHHHHHHHHHHHHHHHTTCTTTSEEEE-----CCCC--CTTCHHHHHHHT
T ss_pred EcCHHHHhhhhhcccccCCcccccccccchHHHHHHHHHhhhhHHHHHHcCCCCccc-----cccc--ChhhHHHHHHHH
Confidence 99999998874 321 12222 344443 899999997650 1222 243333 5666
Q ss_pred HHHHHhCccEEEecC
Q 012943 393 AIAVREGADAVMLSG 407 (453)
Q Consensus 393 ~nav~~G~D~vmLs~ 407 (453)
......|+|+-++-.
T Consensus 523 ~~~~~~GfdGkwViH 537 (731)
T 1p7t_A 523 GDQLRAGANTAWVPS 537 (731)
T ss_dssp HHHHHTTCSEEEESS
T ss_pred HHHHhCCCCCcccCC
Confidence 788899999999853
No 31
>1h6z_A Pyruvate phosphate dikinase; transferase, tropical parasite, trypanosome; 3.00A {Trypanosoma brucei} PDB: 2x0s_A
Probab=97.67 E-value=0.00015 Score=81.80 Aligned_cols=135 Identities=16% Similarity=0.113 Sum_probs=102.7
Q ss_pred CCCCCCHhhHHHHHhh-h---hcCCc---EEEeccccCHHHHHHHHHHHHh--------cC--CCceEEEEecChhhhcc
Q 012943 261 NLPSITDKDWEDIKFG-V---DNQVD---FYAVSFVKDAKVVHELKDYLKS--------CN--ADIHVIVKIESADSIPN 323 (453)
Q Consensus 261 ~lp~ltekD~~DI~~a-~---~~gvd---~I~lSfV~sa~dv~~v~~~L~~--------~~--~~i~IIakIET~~gv~N 323 (453)
..|.+.+-..+.|..| . +.|.+ -|++|||.+.++++.+++.+.+ .| .++.|..+||+|.+.-.
T Consensus 698 ~~peif~~QlrAi~rAa~~~~~~G~~~~~~IMiPmV~t~~E~~~~~~~i~~~~~el~~e~g~~~~~~vG~MiEvPsaal~ 777 (913)
T 1h6z_A 698 TYPEIYNMQVRAIIEAAIAVSEEGSSVIPEIMVPLVGKKEELSLIREEVVKTAEAVITKSGKRVHYTVGTMIEVPRAAVT 777 (913)
T ss_dssp HSTTHHHHHHHHHHHHHHHHHTTTCCCCEEEEECCCCSHHHHHHHHHHHHHHHHHHHHHSCSCCCCEEEEEECSHHHHHT
T ss_pred CChHHHHHHHHHHHHHHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecchHHHHH
Confidence 4566666666666443 2 23644 7899999999999999887632 23 25789999999999999
Q ss_pred HHHHHhhcCEEEEeCCCcccc-CCC----------------------------CCHHHHHHHHHHHHHH--cCCCEEEEe
Q 012943 324 LHSIISASDGAMVARGDLGAE-LPI----------------------------EDVPLLQEDIIRRCRS--MQKPVIVAT 372 (453)
Q Consensus 324 ldeI~~~sDgImIgRGDLg~e-lg~----------------------------e~v~~aqk~Ii~~c~~--aGkpvi~aT 372 (453)
+|+|++.+|++-||-.||..- +|+ +.|..+.+.++++|++ .|+++.++.
T Consensus 778 ad~ia~~~DFfSiGTNDLTQ~tlg~dRd~~~~~l~~y~~~~i~~~dPf~~ld~paV~~lI~~ai~~a~~~~~g~~vgICG 857 (913)
T 1h6z_A 778 ADSIAQKADFFSFGTNDLTQMGCGFSRDDAGPFLRHYGNLGIYAQDPFQSIDQEGIGELVRIAVTKGRRVKPMLKMGICG 857 (913)
T ss_dssp HHHHTTTCSEEEECTTHHHHHHHTCCGGGCHHHHTTTTTTCSSSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEECS
T ss_pred HHHHHHhCCEEEEChHHHHHHHhccCCCchHHHHHHHHhccccccCcccccChHHHHHHHHHHHHHHHhcCCCCEEEEcC
Confidence 999999999999999998531 122 3566778899999997 699999987
Q ss_pred chhhhhccCCCCchHHHHHHHHHHHhCccEEEec
Q 012943 373 NMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (453)
Q Consensus 373 qmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (453)
|+ .+.|.-++ -.+..|.|.+-+|
T Consensus 858 E~------~gdP~~~~-----~l~~~Gid~vS~s 880 (913)
T 1h6z_A 858 EH------GGDPATIG-----FCHKVGLDYVSCS 880 (913)
T ss_dssp GG------GGCHHHHH-----HHHHHTCSEEEEC
T ss_pred CC------CCCHHHHH-----HHHHcCCCEEEEC
Confidence 73 33455444 6788899999887
No 32
>2x0s_A Pyruvate phosphate dikinase; transferase, tropical parasite; 3.00A {Trypanosoma brucei}
Probab=96.97 E-value=0.0037 Score=70.75 Aligned_cols=113 Identities=16% Similarity=0.118 Sum_probs=84.1
Q ss_pred EEEeccccCHHHHHHHHHHHHh--------cC--CCceEEEEecChhhhccHHHHHhhcCEEEEeCCCcccc-CCC----
Q 012943 283 FYAVSFVKDAKVVHELKDYLKS--------CN--ADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAE-LPI---- 347 (453)
Q Consensus 283 ~I~lSfV~sa~dv~~v~~~L~~--------~~--~~i~IIakIET~~gv~NldeI~~~sDgImIgRGDLg~e-lg~---- 347 (453)
-|++|||++.+++..+++.+.+ .+ .+..|-.|||+|.+.-.+|+|++.+|++-||-.||..= +|+
T Consensus 727 ~IMiPmV~~~~E~~~~~~~v~~~~~~~~~~~g~~~~~~vG~MiEvPsaal~ad~~a~~~DFfSiGTNDLTQ~tlg~DRd~ 806 (913)
T 2x0s_A 727 EIMVPLVGKKEELSLIREEVVKTAEAVITKSGKRVHYTVGTMIEVPRAAVTADSIAQKADFFSFGTNDLTQMGCGFSRDD 806 (913)
T ss_dssp EEEETTCCSHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECSHHHHHTHHHHGGGCSEEEECTTHHHHHHHTCCGGG
T ss_pred EEEeeecCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeHHHHHHHHHHHHHHCCEEEECHhHHHHHHHHHhcCC
Confidence 4899999999999887766532 23 25789999999999999999999999999999998431 122
Q ss_pred ------------------------CCHHHHHHHHHHHHHHcC--CCEEEEechhhhhccCCCCchHHHHHHHHHHHhCcc
Q 012943 348 ------------------------EDVPLLQEDIIRRCRSMQ--KPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGAD 401 (453)
Q Consensus 348 ------------------------e~v~~aqk~Ii~~c~~aG--kpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D 401 (453)
+-|..+.+..++++++++ +++.++.|| ...|.-+ .-.+..|.|
T Consensus 807 ~~~~~~~y~~~~~~~~dp~~~~~~~~v~~li~~a~~~gr~~~~~i~vgICGE~------~gdP~~~-----~~L~~~Gid 875 (913)
T 2x0s_A 807 AGPFLRHYGNLGIYAQDPFQSIDQEGIGELVRIAVTKGRRVKPMLKMGICGEH------GGDPATI-----GFCHKVGLD 875 (913)
T ss_dssp CHHHHHHHHHHTSSSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEECSGG------GGCHHHH-----HHHHHHTCS
T ss_pred chhhhhhhhhccccccCCCchhHHHHHHHHHHHHHHHhhhcCCCCeEEEeCCc------ccCHHHH-----HHHHHcCCC
Confidence 134455566666666655 578888773 3345544 377889999
Q ss_pred EEEec
Q 012943 402 AVMLS 406 (453)
Q Consensus 402 ~vmLs 406 (453)
.+=+|
T Consensus 876 ~~S~s 880 (913)
T 2x0s_A 876 YVSCS 880 (913)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99887
No 33
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=96.65 E-value=0.034 Score=59.32 Aligned_cols=126 Identities=20% Similarity=0.241 Sum_probs=89.1
Q ss_pred CHhhHHHHHhhhhcCCcEEEe--ccccCHHHHHHHHHHHHhcCCCceEEE-EecChhhhccHHHHHhhcCEEEEeCCCcc
Q 012943 266 TDKDWEDIKFGVDNQVDFYAV--SFVKDAKVVHELKDYLKSCNADIHVIV-KIESADSIPNLHSIISASDGAMVARGDLG 342 (453)
Q Consensus 266 tekD~~DI~~a~~~gvd~I~l--SfV~sa~dv~~v~~~L~~~~~~i~IIa-kIET~~gv~NldeI~~~sDgImIgRGDLg 342 (453)
++.+.+.+...++.|+|+|.+ +...+ +.+.+..+++++...++.||| .|-|.++.++|-+ +-+|++-+|-|-=+
T Consensus 279 ~~d~~eR~~aLv~AGvD~iviD~ahGhs-~~v~~~i~~ik~~~p~~~viaGNVaT~e~a~~Li~--aGAD~vkVGiGpGS 355 (556)
T 4af0_A 279 RPGDKDRLKLLAEAGLDVVVLDSSQGNS-VYQIEFIKWIKQTYPKIDVIAGNVVTREQAAQLIA--AGADGLRIGMGSGS 355 (556)
T ss_dssp SHHHHHHHHHHHHTTCCEEEECCSCCCS-HHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHH--HTCSEEEECSSCST
T ss_pred CccHHHHHHHHHhcCCcEEEEecccccc-HHHHHHHHHHHhhCCcceEEeccccCHHHHHHHHH--cCCCEEeecCCCCc
Confidence 466677777788999999876 23333 344455566766667888887 9999999877643 34899999865422
Q ss_pred c-------cCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecC
Q 012943 343 A-------ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (453)
Q Consensus 343 ~-------elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 407 (453)
+ -+|.+.+ .+...+.++|++.|+|+|- ..+.-+ --|++.|+..|||+|||.+
T Consensus 356 iCtTr~v~GvG~PQ~-tAi~~~a~~a~~~~vpvIA---------DGGI~~---sGDi~KAlaaGAd~VMlGs 414 (556)
T 4af0_A 356 ICITQEVMAVGRPQG-TAVYAVAEFASRFGIPCIA---------DGGIGN---IGHIAKALALGASAVMMGG 414 (556)
T ss_dssp TBCCTTTCCSCCCHH-HHHHHHHHHHGGGTCCEEE---------ESCCCS---HHHHHHHHHTTCSEEEEST
T ss_pred ccccccccCCCCcHH-HHHHHHHHHHHHcCCCEEe---------cCCcCc---chHHHHHhhcCCCEEEEch
Confidence 2 2233433 3456677888999999875 444444 5789999999999999853
No 34
>1jqo_A Phosphoenolpyruvate carboxylase; beta barrel, carbon dioxide fixation, lyase; 3.00A {Zea mays} SCOP: c.1.12.3
Probab=95.32 E-value=0.041 Score=62.40 Aligned_cols=113 Identities=13% Similarity=0.129 Sum_probs=92.1
Q ss_pred HhhhhcC---CcEEEeccccCHHHHHHHHHHHHhcC--CCceEEEEecChhhhccHHHHHhh--c-----------CEEE
Q 012943 274 KFGVDNQ---VDFYAVSFVKDAKVVHELKDYLKSCN--ADIHVIVKIESADSIPNLHSIISA--S-----------DGAM 335 (453)
Q Consensus 274 ~~a~~~g---vd~I~lSfV~sa~dv~~v~~~L~~~~--~~i~IIakIET~~gv~NldeI~~~--s-----------DgIm 335 (453)
..+.+.| +..+.+|+.++++||.++.-+.++.| ..+.|++-.||.+.++|.++|+.. . --||
T Consensus 519 ~~i~~~g~~a~~~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VVPLFETi~DL~~a~~im~~ll~~p~yr~~l~~~QeVM 598 (970)
T 1jqo_A 519 HVLAELPPDSFGPYIISMATAPSDVLAVELLQRECGVRQPLPVVPLFERLADLQSAPASVERLFSVDWYMDRIKGKQQVM 598 (970)
T ss_dssp HHHHHSCSTTEEEEEETTCCSTHHHHHHHHHHHHTCCSSCCCEEEEECSHHHHHTHHHHHHHHHTCHHHHHHHTSEEEEE
T ss_pred HHHHHhChhhhCeEEeCCCCCHHHHHHHHHHHHHcCCCCCCCeeCCCCCHHHHHhHHHHHHHHHhChHHHHhhCCeEEEE
Confidence 3344445 45678999999999999999888887 468999999999999999999986 1 2799
Q ss_pred EeCCCccccCCC----CCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCch
Q 012943 336 VARGDLGAELPI----EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTR 386 (453)
Q Consensus 336 IgRGDLg~elg~----e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~Ptr 386 (453)
+|.-|=+-+-|+ ..+..+|.++.+.|+++|+.+...=..=.|.-..+.|+.
T Consensus 599 LGYSDS~KD~G~laA~w~ly~Aq~~L~~v~~~~gV~l~lFHGRGGsvgRGGgp~~ 653 (970)
T 1jqo_A 599 VGYSDSGKDAGRLSAAWQLYRAQEEMAQVAKRYGVKLTLFHGRGGTVGRGGGPTH 653 (970)
T ss_dssp EESTTHHHHSCHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCSSGGGTCCCHH
T ss_pred EecccccccccHHHHHHHHHHHHHHHHHHHHHcCCcEEEecCCCCCCCCCCCChH
Confidence 999999999887 478899999999999999998876444445555556664
No 35
>3odm_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta-barrel, lyase; 2.95A {Clostridium perfringens}
Probab=95.25 E-value=0.023 Score=60.44 Aligned_cols=93 Identities=15% Similarity=0.244 Sum_probs=78.0
Q ss_pred cCCcEEEeccccCHHHHHHHHHHHHh--------cC-----CCceEEEEecChhhhccHHHHHhh--c-----------C
Q 012943 279 NQVDFYAVSFVKDAKVVHELKDYLKS--------CN-----ADIHVIVKIESADSIPNLHSIISA--S-----------D 332 (453)
Q Consensus 279 ~gvd~I~lSfV~sa~dv~~v~~~L~~--------~~-----~~i~IIakIET~~gv~NldeI~~~--s-----------D 332 (453)
..+..+.+|+.++++|+.++..++++ .+ ..+.||+.+||.+.+.|.++|+.. . -
T Consensus 138 ~aI~~yIISMT~sasDlL~V~~L~k~~aGL~~~e~g~~~~~~~i~VVPLFETieDL~~a~~Il~~ll~~~r~l~~~~~~Q 217 (560)
T 3odm_A 138 PAISEVVVPMIETGKEISEFQDRVNSVVDMGNKNYKTKLDLNSVRIIPLVEDVPALANIDRILDEHYEIEKSKGHILKDL 217 (560)
T ss_dssp CSCCEEEESSCCSHHHHHHHHHHHHHHHHHHHHHCSSCCCTTSSEEEEEECCHHHHHTTHHHHHHHHHHHHHTTCCCSEE
T ss_pred cccCeEEecCCCCHHHHHHHHHHHHHHhcccccccCCCCCCCCCCeECCcCCHHHHHhhHHHHHHHHHHHHHhcccCCeE
Confidence 45667899999999999998777732 12 267999999999999999999985 2 2
Q ss_pred EEEEeCCCccccCCC----CCHHHHHHHHHHHHHHcCCCEEEE
Q 012943 333 GAMVARGDLGAELPI----EDVPLLQEDIIRRCRSMQKPVIVA 371 (453)
Q Consensus 333 gImIgRGDLg~elg~----e~v~~aqk~Ii~~c~~aGkpvi~a 371 (453)
-||+|+-|=+.+-|+ ..+..||.++.+.|+++|+++...
T Consensus 218 eVMLGYSDSaKDgG~laS~waly~Aq~~L~~~~~e~gI~l~lF 260 (560)
T 3odm_A 218 RIMIARSDTAMSYGLISGVLSVLMAVDGAYKWGEKHGVTISPI 260 (560)
T ss_dssp EEEEESHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred EEEEeeccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCcEEEE
Confidence 799999998888887 468899999999999999997654
No 36
>1jqn_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta barrel, Mn2+ and DCDP complex, lyase; HET: DCO; 2.35A {Escherichia coli} SCOP: c.1.12.3 PDB: 1fiy_A* 1qb4_A
Probab=94.71 E-value=0.028 Score=63.19 Aligned_cols=151 Identities=16% Similarity=0.159 Sum_probs=104.6
Q ss_pred cCCcEEEeccccCHHHHHHHHHHHHhcCC--CceEEEEecChhhhccHHHHHhh---c----------CEEEEeCCCccc
Q 012943 279 NQVDFYAVSFVKDAKVVHELKDYLKSCNA--DIHVIVKIESADSIPNLHSIISA---S----------DGAMVARGDLGA 343 (453)
Q Consensus 279 ~gvd~I~lSfV~sa~dv~~v~~~L~~~~~--~i~IIakIET~~gv~NldeI~~~---s----------DgImIgRGDLg~ 343 (453)
..+..+.+|+.++++||.++.-+.++.|- .+.|++-.||.+.++|.++|+.. . --||+|.-|=+-
T Consensus 467 ~a~~~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VvPLFETi~DL~~a~~im~~ll~~p~yr~~l~~~qeVMlGYSDS~K 546 (883)
T 1jqn_A 467 GSIAAYVISMAKTPSDVLAVHLLLKEAGIGFAMPVAPLFETLDDLNNANDVMTQLLNIDWYRGLIQGKQMVMIGYSDSAK 546 (883)
T ss_dssp TSEEEEEEETCCSHHHHHHHHHHHHTTTCCSCCCEEEEECSHHHHHHHHHHHHHHHHSHHHHHHTTTEEEEEECHHHHHH
T ss_pred hhcCeEEeCCCCCHHHHHHHHHHHHHhCCCCCcCeeCCCCCHHHHHhHHHHHHHHHhChHHHHhhCCeEEEEEeeccccc
Confidence 45667889999999999999988888873 68999999999999999999985 1 279999999888
Q ss_pred cCCC----CCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccCC--CCHHH
Q 012943 344 ELPI----EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHG--KFPLK 417 (453)
Q Consensus 344 elg~----e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G--~yP~e 417 (453)
+-|+ ..+..+|.++.+.|+++|+++...=..=.|+-..+.|+...+-.-......|.=-+--.||+-.- .+|..
T Consensus 547 D~G~laA~w~ly~Aq~~L~~v~~~~gV~l~lFhGRGGsvgRGGgp~~~ailaqp~gsv~g~~r~TeQGEvI~~kY~~p~~ 626 (883)
T 1jqn_A 547 DAGVMAASWAQYQAQDALIKTCEKAGIELTLFHGRGGSIGRGGAPAHAALLSQPPGSLKGGLRVTEQGEMIRFKYGLPEI 626 (883)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECSSTGGGSCHHHHHHHHHTSCTTTTTTCEEEEECGGGHHHHHSSHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCCCCCCCCCCCchHHHHHhCCCCCcCCceEEEecchHHHHhcCChHH
Confidence 8887 46889999999999999999877533333333333343211111111112233344455554322 34778
Q ss_pred HHHHHHHHHHHH
Q 012943 418 AVKVMHTVALRT 429 (453)
Q Consensus 418 aV~~m~~I~~~a 429 (453)
|++.|..++..+
T Consensus 627 a~~nLe~~~~A~ 638 (883)
T 1jqn_A 627 TVSSLSLYTGAI 638 (883)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 887665555433
No 37
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=94.58 E-value=0.37 Score=44.04 Aligned_cols=137 Identities=16% Similarity=0.139 Sum_probs=83.4
Q ss_pred HHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecCh-hhhccHHHHHhh-cCEEEEeCCCccccCCCCCH
Q 012943 273 IKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESA-DSIPNLHSIISA-SDGAMVARGDLGAELPIEDV 350 (453)
Q Consensus 273 I~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~-~gv~NldeI~~~-sDgImIgRGDLg~elg~e~v 350 (453)
++.+.+.|+|+|.++-....+++..+.+++++.|. .+++-+-++ .-++.+..+.+. +|.|.+.+|-=+...+...+
T Consensus 70 ~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g~--~~~v~~~~~~t~~~~~~~~~~~g~d~i~v~~g~~g~~~~~~~~ 147 (211)
T 3f4w_A 70 SQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAGK--QVVVDMICVDDLPARVRLLEEAGADMLAVHTGTDQQAAGRKPI 147 (211)
T ss_dssp HHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTC--EEEEECTTCSSHHHHHHHHHHHTCCEEEEECCHHHHHTTCCSH
T ss_pred HHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHcCC--eEEEEecCCCCHHHHHHHHHHcCCCEEEEcCCCcccccCCCCH
Confidence 66777899999999755444677777777777654 344322122 123446666666 89888876522222222222
Q ss_pred HHHHHHHHHHHHHc-CCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccCCCCHHHHHHHHHHHHHH
Q 012943 351 PLLQEDIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALR 428 (453)
Q Consensus 351 ~~aqk~Ii~~c~~a-Gkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~ 428 (453)
...+++ .... +.|+++. .+. +. .++..+...|+|+++..+---.+..|.++++.+.+.+..
T Consensus 148 -~~i~~l---~~~~~~~~i~~~---------gGI-~~---~~~~~~~~~Gad~vvvGsai~~~~d~~~~~~~l~~~~~~ 209 (211)
T 3f4w_A 148 -DDLITM---LKVRRKARIAVA---------GGI-SS---QTVKDYALLGPDVVIVGSAITHAADPAGEARKISQVLLQ 209 (211)
T ss_dssp -HHHHHH---HHHCSSCEEEEE---------SSC-CT---TTHHHHHTTCCSEEEECHHHHTCSSHHHHHHHHHHHHHH
T ss_pred -HHHHHH---HHHcCCCcEEEE---------CCC-CH---HHHHHHHHcCCCEEEECHHHcCCCCHHHHHHHHHHHHhh
Confidence 111222 2222 5677664 222 21 245677888999999976656778899999998877653
No 38
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=94.13 E-value=0.42 Score=45.24 Aligned_cols=138 Identities=12% Similarity=0.126 Sum_probs=84.8
Q ss_pred HHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhhcCEEEEeCCCccccCCCC---C
Q 012943 273 IKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIE---D 349 (453)
Q Consensus 273 I~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~sDgImIgRGDLg~elg~e---~ 349 (453)
++.+.+.|+|+|.+.. +...++....+.+++.|....+. |-....++.+++++...|.+++-. ++-|+. -
T Consensus 80 i~~~~~aGad~itvH~-Ea~~~~~~~i~~i~~~G~k~gva--l~p~t~~e~l~~~l~~~D~Vl~ms----v~pGf~Gq~f 152 (228)
T 3ovp_A 80 VKPMAVAGANQYTFHL-EATENPGALIKDIRENGMKVGLA--IKPGTSVEYLAPWANQIDMALVMT----VEPGFGGQKF 152 (228)
T ss_dssp HHHHHHHTCSEEEEEG-GGCSCHHHHHHHHHHTTCEEEEE--ECTTSCGGGTGGGGGGCSEEEEES----SCTTTCSCCC
T ss_pred HHHHHHcCCCEEEEcc-CCchhHHHHHHHHHHcCCCEEEE--EcCCCCHHHHHHHhccCCeEEEee----ecCCCCCccc
Confidence 4556688999999874 55556666777777776655544 444445778888888899888732 232321 1
Q ss_pred HHHHHHHHHHHHHHc-CCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccCCCCHHHHHHHHHHHHHH
Q 012943 350 VPLLQEDIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALR 428 (453)
Q Consensus 350 v~~aqk~Ii~~c~~a-Gkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~ 428 (453)
.+....+|-+..... +.++.+. -.-.|.. +..++..|+|.++..+---..+-|.++++.|++.+.+
T Consensus 153 ~~~~l~ki~~lr~~~~~~~I~Vd--------GGI~~~t-----~~~~~~aGAd~~VvGsaIf~a~dp~~~~~~l~~~~~~ 219 (228)
T 3ovp_A 153 MEDMMPKVHWLRTQFPSLDIEVD--------GGVGPDT-----VHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSE 219 (228)
T ss_dssp CGGGHHHHHHHHHHCTTCEEEEE--------SSCSTTT-----HHHHHHHTCCEEEESHHHHTCSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCCEEEe--------CCcCHHH-----HHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHHHHHH
Confidence 122222222222222 2444443 2233433 4477889999999875444567899999999987766
Q ss_pred Hh
Q 012943 429 TE 430 (453)
Q Consensus 429 aE 430 (453)
+-
T Consensus 220 ~~ 221 (228)
T 3ovp_A 220 AA 221 (228)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 39
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=94.13 E-value=0.49 Score=48.69 Aligned_cols=119 Identities=24% Similarity=0.305 Sum_probs=71.7
Q ss_pred HHHHHhhhhcCCcEEEe--ccccCHHHHHHHHHHHHhcCCCceEEE-EecChhhhccHHHHHhh-cCEEEEeCC--Cccc
Q 012943 270 WEDIKFGVDNQVDFYAV--SFVKDAKVVHELKDYLKSCNADIHVIV-KIESADSIPNLHSIISA-SDGAMVARG--DLGA 343 (453)
Q Consensus 270 ~~DI~~a~~~gvd~I~l--SfV~sa~dv~~v~~~L~~~~~~i~IIa-kIET~~gv~NldeI~~~-sDgImIgRG--DLg~ 343 (453)
.+.++.+++.|+|+|.+ ++..+......++ .+.+.- .++|++ .+=|.+..+ .+.++ +|+|.+|-+ ....
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~~~~~~e~I~-~ik~~~-~i~Vi~g~V~t~e~A~---~a~~aGAD~I~vG~g~Gs~~~ 220 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLK-EIKSKM-NIDVIVGNVVTEEATK---ELIENGADGIKVGIGPGSICT 220 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHH-HHHTTC-CCEEEEEEECSHHHHH---HHHHTTCSEEEECC-------
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHH-HHHhcC-CCeEEEeecCCHHHHH---HHHHcCCCEEEEeCCCCcCcc
Confidence 45677778999999986 5554432233333 333322 577886 566655443 33344 899999632 2111
Q ss_pred -----cCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEec
Q 012943 344 -----ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (453)
Q Consensus 344 -----elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (453)
..|.+ -..+...+.+.+++.++|+|-+ .+.-+ ..|++.++..|+|+||+.
T Consensus 221 tr~~~g~g~p-~~~al~~v~~~~~~~~IPVIA~---------GGI~~---~~di~kalalGAd~V~vG 275 (400)
T 3ffs_A 221 TRIVAGVGVP-QITAIEKCSSVASKFGIPIIAD---------GGIRY---SGDIGKALAVGASSVMIG 275 (400)
T ss_dssp --CCSCBCCC-HHHHHHHHHHHHTTTTCCEEEE---------SCCCS---HHHHHHHHTTTCSEEEEC
T ss_pred cccccccchh-HHHHHHHHHHHHHhcCCCEEec---------CCCCC---HHHHHHHHHcCCCEEEEC
Confidence 11222 2344566666666779998875 34444 467889999999999974
No 40
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=94.00 E-value=0.25 Score=47.60 Aligned_cols=140 Identities=12% Similarity=0.069 Sum_probs=87.0
Q ss_pred HHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhhcCEEEEeCCC--ccccCCCCC
Q 012943 272 DIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGD--LGAELPIED 349 (453)
Q Consensus 272 DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~sDgImIgRGD--Lg~elg~e~ 349 (453)
.++.+.+.|+|+|.+.. +...++.+.-+.+++.|....+...=.| -++.+++++...|.|++-.-+ ++-.-=.+.
T Consensus 101 ~i~~~~~aGAd~itvH~-Ea~~~~~~~i~~ir~~G~k~Gvalnp~T--p~e~l~~~l~~vD~VlvMsV~PGfgGQ~fi~~ 177 (246)
T 3inp_A 101 LIESFAKAGATSIVFHP-EASEHIDRSLQLIKSFGIQAGLALNPAT--GIDCLKYVESNIDRVLIMSVNPGFGGQKFIPA 177 (246)
T ss_dssp HHHHHHHHTCSEEEECG-GGCSCHHHHHHHHHTTTSEEEEEECTTC--CSGGGTTTGGGCSEEEEECSCTTC--CCCCTT
T ss_pred HHHHHHHcCCCEEEEcc-ccchhHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHHhcCCEEEEeeecCCCCCcccchH
Confidence 45566789999999874 4445777777777777766655433344 557788888889988874322 221111133
Q ss_pred HHHHHHHHHHHHHHcCC--CEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccCCCCHHHHHHHHHHHHH
Q 012943 350 VPLLQEDIIRRCRSMQK--PVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVAL 427 (453)
Q Consensus 350 v~~aqk~Ii~~c~~aGk--pvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~ 427 (453)
...-.+++-+.+.+.|. ++-+. -.-.|.. +..++..|+|.++..+---..+-|.++++.|++.+.
T Consensus 178 ~l~KI~~lr~~~~~~~~~~~I~VD--------GGI~~~t-----i~~~~~aGAD~~V~GSaIf~a~dp~~~i~~l~~~i~ 244 (246)
T 3inp_A 178 MLDKAKEISKWISSTDRDILLEID--------GGVNPYN-----IAEIAVCGVNAFVAGSAIFNSDSYKQTIDKMRDELN 244 (246)
T ss_dssp HHHHHHHHHHHHHHHTSCCEEEEE--------SSCCTTT-----HHHHHTTTCCEEEESHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCeeEEEE--------CCcCHHH-----HHHHHHcCCCEEEEehHHhCCCCHHHHHHHHHHHHh
Confidence 33334444444555553 34342 2333443 447789999999986444456789999999987654
No 41
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=93.59 E-value=1.2 Score=47.14 Aligned_cols=126 Identities=17% Similarity=0.184 Sum_probs=77.5
Q ss_pred HhhHHHHHhhhhcCCcEEEecccc-CHHHHHHHHHHHHhcCCCceEEE-EecChhhhccHHHHHhhcCEEEEeCCCccc-
Q 012943 267 DKDWEDIKFGVDNQVDFYAVSFVK-DAKVVHELKDYLKSCNADIHVIV-KIESADSIPNLHSIISASDGAMVARGDLGA- 343 (453)
Q Consensus 267 ekD~~DI~~a~~~gvd~I~lSfV~-sa~dv~~v~~~L~~~~~~i~IIa-kIET~~gv~NldeI~~~sDgImIgRGDLg~- 343 (453)
+...+.+.+.++.|+|.|.+.... ....+.++-+.+.+.-.++.|++ .|-|.+....+.+ .-+|+|.+|-|-=+.
T Consensus 255 ~d~~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~v~t~e~a~~~~~--aGad~i~vg~g~gsi~ 332 (511)
T 3usb_A 255 ADAMTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGNVATAEATKALIE--AGANVVKVGIGPGSIC 332 (511)
T ss_dssp TTHHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHH--HTCSEEEECSSCSTTC
T ss_pred cchHHHHHHHHhhccceEEecccccchhhhhhHHHHHHHhCCCceEEeeeeccHHHHHHHHH--hCCCEEEECCCCcccc
Confidence 345677778889999999885332 22333333333444334566665 6777665433332 238999986432111
Q ss_pred ------cCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecC
Q 012943 344 ------ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (453)
Q Consensus 344 ------elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 407 (453)
.+|.+. ..+...+.++|++.++|+|.+ .+.-+ ..|++.++..|+|+||+..
T Consensus 333 ~~~~~~g~g~p~-~~~l~~v~~~~~~~~iPVIa~---------GGI~~---~~di~kala~GA~~V~vGs 389 (511)
T 3usb_A 333 TTRVVAGVGVPQ-LTAVYDCATEARKHGIPVIAD---------GGIKY---SGDMVKALAAGAHVVMLGS 389 (511)
T ss_dssp CHHHHHCCCCCH-HHHHHHHHHHHHTTTCCEEEE---------SCCCS---HHHHHHHHHTTCSEEEEST
T ss_pred ccccccCCCCCc-HHHHHHHHHHHHhCCCcEEEe---------CCCCC---HHHHHHHHHhCchhheecH
Confidence 122222 344566777888889999975 33333 5678899999999999853
No 42
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=93.48 E-value=1.5 Score=40.92 Aligned_cols=138 Identities=11% Similarity=0.127 Sum_probs=81.1
Q ss_pred HHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHh---hcCEEEEeCCCcc---ccC
Q 012943 272 DIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIIS---ASDGAMVARGDLG---AEL 345 (453)
Q Consensus 272 DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~---~sDgImIgRGDLg---~el 345 (453)
.++.+.+.|+|+|.+..-.+...+..+.+.+.+.| ..++.-+....-++.+.+++. .+|.+.++.-.-+ ...
T Consensus 79 ~i~~~~~agad~v~vH~~~~~~~~~~~~~~i~~~g--~~igv~~~p~t~~e~~~~~~~~~~~~d~vl~~sv~pg~~g~~~ 156 (228)
T 1h1y_A 79 YVEPLAKAGASGFTFHIEVSRDNWQELIQSIKAKG--MRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEPGFGGQKF 156 (228)
T ss_dssp GHHHHHHHTCSEEEEEGGGCTTTHHHHHHHHHHTT--CEEEEEECTTSCGGGGHHHHHSSSCCSEEEEESSCTTCSSCCC
T ss_pred HHHHHHHcCCCEEEECCCCcccHHHHHHHHHHHcC--CCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEeecCCCCcccC
Confidence 35566678999998886655444134444454444 455566643334667888888 7899988643322 122
Q ss_pred CCCCHHHHHHHHHHHHHHc-CCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccCCCCHHHHHHHHHH
Q 012943 346 PIEDVPLLQEDIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHT 424 (453)
Q Consensus 346 g~e~v~~aqk~Ii~~c~~a-Gkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~ 424 (453)
+...+ +++-+..+.. +.|+.++ ..-.|. . +..++..|+|++...+---..+-|.++++.|++
T Consensus 157 ~~~~l----~~i~~~~~~~~~~pi~v~--------GGI~~~--n---i~~~~~aGaD~vvvGsai~~~~d~~~~~~~l~~ 219 (228)
T 1h1y_A 157 MPEMM----EKVRALRKKYPSLDIEVD--------GGLGPS--T---IDVAASAGANCIVAGSSIFGAAEPGEVISALRK 219 (228)
T ss_dssp CGGGH----HHHHHHHHHCTTSEEEEE--------SSCSTT--T---HHHHHHHTCCEEEESHHHHTSSCHHHHHHHHHH
T ss_pred CHHHH----HHHHHHHHhcCCCCEEEE--------CCcCHH--H---HHHHHHcCCCEEEECHHHHCCCCHHHHHHHHHH
Confidence 21112 2222222223 6787765 222333 2 334455599999987554455679999999988
Q ss_pred HHHH
Q 012943 425 VALR 428 (453)
Q Consensus 425 I~~~ 428 (453)
.+.+
T Consensus 220 ~~~~ 223 (228)
T 1h1y_A 220 SVEG 223 (228)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7653
No 43
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=93.16 E-value=2.1 Score=43.37 Aligned_cols=123 Identities=19% Similarity=0.272 Sum_probs=75.5
Q ss_pred hhHHHHHhhhhcCCcEEEe--ccccCHHHHHHHHHHHHhcCCCceEEE-EecChhhhccHHHHHhhcCEEEEe--CCCcc
Q 012943 268 KDWEDIKFGVDNQVDFYAV--SFVKDAKVVHELKDYLKSCNADIHVIV-KIESADSIPNLHSIISASDGAMVA--RGDLG 342 (453)
Q Consensus 268 kD~~DI~~a~~~gvd~I~l--SfV~sa~dv~~v~~~L~~~~~~i~IIa-kIET~~gv~NldeI~~~sDgImIg--RGDLg 342 (453)
.+.+.++.+++.|+|+|.+ ++..+...+..++. +.+...++.|++ .+-|++....+.+ .-+|+|.+| +|--.
T Consensus 108 ~~~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~-ik~~~p~v~Vi~G~v~t~e~A~~a~~--aGAD~I~vG~gpGs~~ 184 (366)
T 4fo4_A 108 GNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRE-TRAAYPHLEIIGGNVATAEGARALIE--AGVSAVKVGIGPGSIC 184 (366)
T ss_dssp TCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHH-HHHHCTTCEEEEEEECSHHHHHHHHH--HTCSEEEECSSCSTTB
T ss_pred hHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHH-HHHhcCCCceEeeeeCCHHHHHHHHH--cCCCEEEEecCCCCCC
Confidence 3456677788999999887 44444433333433 333334677776 5777766544432 238999995 22111
Q ss_pred c-----cCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEec
Q 012943 343 A-----ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (453)
Q Consensus 343 ~-----elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (453)
. ..|.+.+ .+...+.+.|++.++|+|.+ .+.-+ ..|++.++..|+|+||+.
T Consensus 185 ~tr~~~g~g~p~~-~~l~~v~~~~~~~~iPVIA~---------GGI~~---~~di~kala~GAd~V~vG 240 (366)
T 4fo4_A 185 TTRIVTGVGVPQI-TAIADAAGVANEYGIPVIAD---------GGIRF---SGDISKAIAAGASCVMVG 240 (366)
T ss_dssp CHHHHHCCCCCHH-HHHHHHHHHHGGGTCCEEEE---------SCCCS---HHHHHHHHHTTCSEEEES
T ss_pred CcccccCcccchH-HHHHHHHHHHhhcCCeEEEe---------CCCCC---HHHHHHHHHcCCCEEEEC
Confidence 0 1233322 33455666677789998874 33433 457889999999999985
No 44
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=92.84 E-value=2 Score=43.40 Aligned_cols=119 Identities=22% Similarity=0.314 Sum_probs=71.7
Q ss_pred HHHHHhhhhcCCcEEEe--ccccCHHHHHHHHHHHHhcCCCceEEE-EecChhhhccHHHHHhh-cCEEEEe--CCCccc
Q 012943 270 WEDIKFGVDNQVDFYAV--SFVKDAKVVHELKDYLKSCNADIHVIV-KIESADSIPNLHSIISA-SDGAMVA--RGDLGA 343 (453)
Q Consensus 270 ~~DI~~a~~~gvd~I~l--SfV~sa~dv~~v~~~L~~~~~~i~IIa-kIET~~gv~NldeI~~~-sDgImIg--RGDLg~ 343 (453)
.+.++.+++.|+|+|.+ ++-.+...+..+++.-+.. +++|++ .+-|++..+. +.+. +|+|.+| +|....
T Consensus 107 ~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~~--~~~Vivg~v~t~e~A~~---l~~aGaD~I~VG~~~Gs~~~ 181 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKM--NIDVIVGNVVTEEATKE---LIENGADGIKVGIGPGSICT 181 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHHHC--CCEEEEEEECSHHHHHH---HHHTTCSEEEECSSCCTTCC
T ss_pred HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHHhc--CCcEEEccCCCHHHHHH---HHHcCcCEEEEecCCCcCCC
Confidence 45566678899999986 3333322223333332222 577776 7777766543 3344 8999996 332211
Q ss_pred -----cCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEec
Q 012943 344 -----ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (453)
Q Consensus 344 -----elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (453)
..|.+. ..+..++.+.++..++|+|.+ .+.-+ ..|++.++..|+|+||+.
T Consensus 182 tr~~~g~g~p~-~~~i~~v~~~~~~~~iPVIA~---------GGI~~---~~di~kala~GAd~V~vG 236 (361)
T 3khj_A 182 TRIVAGVGVPQ-ITAIEKCSSVASKFGIPIIAD---------GGIRY---SGDIGKALAVGASSVMIG 236 (361)
T ss_dssp HHHHTCBCCCH-HHHHHHHHHHHHHHTCCEEEE---------SCCCS---HHHHHHHHHHTCSEEEES
T ss_pred cccccCCCCCc-HHHHHHHHHHHhhcCCeEEEE---------CCCCC---HHHHHHHHHcCCCEEEEC
Confidence 112232 334455666677789998874 34434 357888999999999975
No 45
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=92.41 E-value=1.6 Score=41.42 Aligned_cols=139 Identities=14% Similarity=0.107 Sum_probs=85.2
Q ss_pred HHhhhhcCCcEEEeccccC-HHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhhcCEEEEeCCCc---cccCCCC
Q 012943 273 IKFGVDNQVDFYAVSFVKD-AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDL---GAELPIE 348 (453)
Q Consensus 273 I~~a~~~gvd~I~lSfV~s-a~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~sDgImIgRGDL---g~elg~e 348 (453)
++.+.+.|+|+|.+..- . ..++..+.+.+++.|..+.+...-.|+ ++.+++++...|.+.+-.-+- +.... +
T Consensus 73 i~~~~~aGAd~itvh~E-a~~~~~~~~i~~i~~~G~k~gv~lnp~tp--~~~~~~~l~~~D~VlvmsV~pGfggQ~f~-~ 148 (231)
T 3ctl_A 73 IAQLARAGADFITLHPE-TINGQAFRLIDEIRRHDMKVGLILNPETP--VEAMKYYIHKADKITVMTVDPGFAGQPFI-P 148 (231)
T ss_dssp HHHHHHHTCSEEEECGG-GCTTTHHHHHHHHHHTTCEEEEEECTTCC--GGGGTTTGGGCSEEEEESSCTTCSSCCCC-T
T ss_pred HHHHHHcCCCEEEECcc-cCCccHHHHHHHHHHcCCeEEEEEECCCc--HHHHHHHHhcCCEEEEeeeccCcCCcccc-H
Confidence 56667889999988753 3 346777778888877766665555555 667888888899887532221 21221 2
Q ss_pred CHHHHHHHHHHHHHHc--CCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEec-CcccCCCC-HHHHHHHHHH
Q 012943 349 DVPLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS-GETAHGKF-PLKAVKVMHT 424 (453)
Q Consensus 349 ~v~~aqk~Ii~~c~~a--Gkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs-~ETA~G~y-P~eaV~~m~~ 424 (453)
....-.+++-+...+. +.++.+. ..-.+.. +..++..|+|.++.. +---..+- |.++++.|++
T Consensus 149 ~~l~kI~~lr~~~~~~~~~~~I~Vd--------GGI~~~~-----~~~~~~aGAd~~V~G~saif~~~d~~~~~~~~l~~ 215 (231)
T 3ctl_A 149 EMLDKLAELKAWREREGLEYEIEVD--------GSCNQAT-----YEKLMAAGADVFIVGTSGLFNHAENIDEAWRIMTA 215 (231)
T ss_dssp THHHHHHHHHHHHHHHTCCCEEEEE--------SCCSTTT-----HHHHHHHTCCEEEECTTTTGGGCSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCceEEEE--------CCcCHHH-----HHHHHHcCCCEEEEccHHHhCCCCcHHHHHHHHHH
Confidence 3333334444444444 3454442 2223333 336678899999986 54333435 9999999988
Q ss_pred HHHH
Q 012943 425 VALR 428 (453)
Q Consensus 425 I~~~ 428 (453)
.+.+
T Consensus 216 ~~~~ 219 (231)
T 3ctl_A 216 QILA 219 (231)
T ss_dssp HHHC
T ss_pred HHHH
Confidence 6553
No 46
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=92.40 E-value=1.9 Score=40.96 Aligned_cols=42 Identities=7% Similarity=0.158 Sum_probs=33.4
Q ss_pred HHHHHHHHHhCCcEE--EeecCCCChHHHHHHHHHHHHHHhhcC
Q 012943 114 REMIWKLAEEGMNVA--RLNMSHGDHASHQKTIDLVKEYNSQFE 155 (453)
Q Consensus 114 ~e~i~~Li~aGmnva--RiNfSHg~~e~~~~~I~~iR~a~~~~~ 155 (453)
.+.+++.+++|++.. .+|....+.++..+.++.++++.++++
T Consensus 102 ~~~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g 145 (273)
T 2qjg_A 102 VTTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWG 145 (273)
T ss_dssp CSCHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcC
Confidence 677899999999999 888887777766677777777766665
No 47
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=92.37 E-value=1.7 Score=45.73 Aligned_cols=123 Identities=20% Similarity=0.232 Sum_probs=76.5
Q ss_pred HhhHHHHHhhhhcCCcEEEeccc--cCHHHHHHHHHHHHhcCCCceEEE-EecChhhhccHHHHHhh-cCEEEEeCCCcc
Q 012943 267 DKDWEDIKFGVDNQVDFYAVSFV--KDAKVVHELKDYLKSCNADIHVIV-KIESADSIPNLHSIISA-SDGAMVARGDLG 342 (453)
Q Consensus 267 ekD~~DI~~a~~~gvd~I~lSfV--~sa~dv~~v~~~L~~~~~~i~IIa-kIET~~gv~NldeI~~~-sDgImIgRGDLg 342 (453)
+.+.+.++..++.|+|.|.+-.. .+...+..+++ +.+.-.++.|++ .+-|.+..+.+ .++ +|+|.++-|.=+
T Consensus 230 ~d~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~-ir~~~p~~~Vi~g~v~t~e~a~~l---~~aGaD~I~Vg~g~Gs 305 (496)
T 4fxs_A 230 PGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRE-TRAAYPHLEIIGGNVATAEGARAL---IEAGVSAVKVGIGPGS 305 (496)
T ss_dssp SCCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHH-HHHHCTTCCEEEEEECSHHHHHHH---HHHTCSEEEECSSCCT
T ss_pred cchHHHHHHHHhccCceEEeccccccchHHHHHHHH-HHHHCCCceEEEcccCcHHHHHHH---HHhCCCEEEECCCCCc
Confidence 34566777778889999987543 22222223333 333334566766 47777665443 334 899998643222
Q ss_pred cc-------CCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEec
Q 012943 343 AE-------LPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (453)
Q Consensus 343 ~e-------lg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (453)
.. .|.+ -..+..++.++|++.++|+|.+ .+.-+ ..|++.++..|+|+||+.
T Consensus 306 ~~~tr~~~g~g~p-~~~~i~~v~~~~~~~~iPVIa~---------GGI~~---~~di~kala~GAd~V~iG 363 (496)
T 4fxs_A 306 ICTTRIVTGVGVP-QITAIADAAGVANEYGIPVIAD---------GGIRF---SGDISKAIAAGASCVMVG 363 (496)
T ss_dssp TBCHHHHHCCCCC-HHHHHHHHHHHHGGGTCCEEEE---------SCCCS---HHHHHHHHHTTCSEEEES
T ss_pred CcccccccCCCcc-HHHHHHHHHHHhccCCCeEEEe---------CCCCC---HHHHHHHHHcCCCeEEec
Confidence 11 1222 3345567778888889999874 34444 467888999999999985
No 48
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=92.24 E-value=1.5 Score=46.10 Aligned_cols=123 Identities=20% Similarity=0.224 Sum_probs=75.9
Q ss_pred HhhHHHHHhhhhcCCcEEEec--cccCHHHHHHHHHHHHhcCCCceEEEE-ecChhhhccHHHHHhh-cCEEEEeCCCcc
Q 012943 267 DKDWEDIKFGVDNQVDFYAVS--FVKDAKVVHELKDYLKSCNADIHVIVK-IESADSIPNLHSIISA-SDGAMVARGDLG 342 (453)
Q Consensus 267 ekD~~DI~~a~~~gvd~I~lS--fV~sa~dv~~v~~~L~~~~~~i~IIak-IET~~gv~NldeI~~~-sDgImIgRGDLg 342 (453)
+.+.+.++..++.|+|+|.+- ...+...+..++ .+.+.-.+++|++. +-|.+.... +.++ +|+|.+|-|.=+
T Consensus 228 ~~~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~-~i~~~~p~~~Vi~g~v~t~e~a~~---l~~aGaD~I~vg~g~Gs 303 (490)
T 4avf_A 228 ADTGERVAALVAAGVDVVVVDTAHGHSKGVIERVR-WVKQTFPDVQVIGGNIATAEAAKA---LAEAGADAVKVGIGPGS 303 (490)
T ss_dssp TTHHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHH-HHHHHCTTSEEEEEEECSHHHHHH---HHHTTCSEEEECSSCST
T ss_pred cchHHHHHHHhhcccceEEecccCCcchhHHHHHH-HHHHHCCCceEEEeeeCcHHHHHH---HHHcCCCEEEECCCCCc
Confidence 445677777888999998863 222332222333 33333345677775 777765533 3334 899999643211
Q ss_pred c-------cCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEec
Q 012943 343 A-------ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (453)
Q Consensus 343 ~-------elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (453)
. ..|.+ -..+..++.+++++.++|+|.+ .+.-+ ..|++.++..|+|+||+.
T Consensus 304 ~~~t~~~~g~g~p-~~~~l~~v~~~~~~~~iPVIa~---------GGI~~---~~di~kal~~GAd~V~vG 361 (490)
T 4avf_A 304 ICTTRIVAGVGVP-QISAIANVAAALEGTGVPLIAD---------GGIRF---SGDLAKAMVAGAYCVMMG 361 (490)
T ss_dssp TCHHHHHTCBCCC-HHHHHHHHHHHHTTTTCCEEEE---------SCCCS---HHHHHHHHHHTCSEEEEC
T ss_pred CCCccccCCCCcc-HHHHHHHHHHHhccCCCcEEEe---------CCCCC---HHHHHHHHHcCCCeeeec
Confidence 1 12223 2344566777777789999874 34444 467888999999999985
No 49
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=91.95 E-value=2.6 Score=42.68 Aligned_cols=119 Identities=18% Similarity=0.253 Sum_probs=70.0
Q ss_pred HhhHHHHHhhhhcCCcEEEec--cccCHHHHHHHHHHHHhcCCCceEEEE-ecChhhhccHHHHHhh-cCEEEEeCCC--
Q 012943 267 DKDWEDIKFGVDNQVDFYAVS--FVKDAKVVHELKDYLKSCNADIHVIVK-IESADSIPNLHSIISA-SDGAMVARGD-- 340 (453)
Q Consensus 267 ekD~~DI~~a~~~gvd~I~lS--fV~sa~dv~~v~~~L~~~~~~i~IIak-IET~~gv~NldeI~~~-sDgImIgRGD-- 340 (453)
+...+.++.+++.|+|+|.+- .-. ...+.+.-+.+.+.-.+++|+++ +-|++.... ..++ +|+|.++-+-
T Consensus 99 ~~~~e~~~~a~~aGvdvI~id~a~G~-~~~~~e~I~~ir~~~~~~~Vi~G~V~T~e~A~~---a~~aGaD~I~Vg~g~G~ 174 (361)
T 3r2g_A 99 ENELQRAEALRDAGADFFCVDVAHAH-AKYVGKTLKSLRQLLGSRCIMAGNVATYAGADY---LASCGADIIKAGIGGGS 174 (361)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSCCS-SHHHHHHHHHHHHHHTTCEEEEEEECSHHHHHH---HHHTTCSEEEECCSSSS
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCCC-cHhHHHHHHHHHHhcCCCeEEEcCcCCHHHHHH---HHHcCCCEEEEcCCCCc
Confidence 455677788889999999873 322 22222222334333246889995 877765433 3334 8999995221
Q ss_pred ccc-----cCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEec
Q 012943 341 LGA-----ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (453)
Q Consensus 341 Lg~-----elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (453)
-.. ..|.+ |-..+..|.++..|+|.. .+.-+ -.|+..++..|+|+||+.
T Consensus 175 ~~~tr~~~g~g~p-----~l~aI~~~~~~~~PVIAd---------GGI~~---~~di~kALa~GAd~V~iG 228 (361)
T 3r2g_A 175 VCSTRIKTGFGVP-----MLTCIQDCSRADRSIVAD---------GGIKT---SGDIVKALAFGADFVMIG 228 (361)
T ss_dssp CHHHHHHHCCCCC-----HHHHHHHHTTSSSEEEEE---------SCCCS---HHHHHHHHHTTCSEEEES
T ss_pred CccccccCCccHH-----HHHHHHHHHHhCCCEEEE---------CCCCC---HHHHHHHHHcCCCEEEEC
Confidence 100 11222 334444455544487763 33333 467889999999999985
No 50
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=91.61 E-value=2 Score=39.24 Aligned_cols=137 Identities=10% Similarity=0.115 Sum_probs=77.7
Q ss_pred HHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhhcCEEEE-eCC-Cc-cccCCCCC
Q 012943 273 IKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMV-ARG-DL-GAELPIED 349 (453)
Q Consensus 273 I~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~sDgImI-gRG-DL-g~elg~e~ 349 (453)
++.+.+.|+|+|.+.--.. +....+.+.+.+.+ ..++.-+-+....+.+.++...+|.+++ +.+ -. +...+. .
T Consensus 77 i~~~~~~gad~v~vh~~~~-~~~~~~~~~~~~~g--~~i~~~~~~~t~~e~~~~~~~~~d~vl~~~~~~g~~g~~~~~-~ 152 (220)
T 2fli_A 77 VEAFAQAGADIMTIHTEST-RHIHGALQKIKAAG--MKAGVVINPGTPATALEPLLDLVDQVLIMTVNPGFGGQAFIP-E 152 (220)
T ss_dssp HHHHHHHTCSEEEEEGGGC-SCHHHHHHHHHHTT--SEEEEEECTTSCGGGGGGGTTTCSEEEEESSCTTCSSCCCCG-G
T ss_pred HHHHHHcCCCEEEEccCcc-ccHHHHHHHHHHcC--CcEEEEEcCCCCHHHHHHHHhhCCEEEEEEECCCCcccccCH-H
Confidence 4666788999998865443 45555666666554 4456556333344445555556787765 211 01 222221 1
Q ss_pred HHHHHHHHHHHHHHc--CCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccCCCCHHHHHHHHHHHH
Q 012943 350 VPLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVA 426 (453)
Q Consensus 350 v~~aqk~Ii~~c~~a--Gkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~ 426 (453)
...-.+++-+.+.+. +.|++++ -.-.|. ++..+...|+|++...+---.+..|.++++.+++.+
T Consensus 153 ~~~~i~~~~~~~~~~~~~~~i~v~--------GGI~~~-----~~~~~~~~Gad~vvvGsai~~~~d~~~a~~~~~~~~ 218 (220)
T 2fli_A 153 CLEKVATVAKWRDEKGLSFDIEVD--------GGVDNK-----TIRACYEAGANVFVAGSYLFKASDLVSQVQTLRTAL 218 (220)
T ss_dssp GHHHHHHHHHHHHHTTCCCEEEEE--------SSCCTT-----THHHHHHHTCCEEEESHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCceEEEE--------CcCCHH-----HHHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHHh
Confidence 112223333333333 5666664 222332 344556669999999877667788999999887643
No 51
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=91.33 E-value=0.63 Score=43.84 Aligned_cols=139 Identities=11% Similarity=0.090 Sum_probs=79.0
Q ss_pred HHHhhhhcCCcEEEecccc-CHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhhcCEEEEeCCCcccc--CCCC
Q 012943 272 DIKFGVDNQVDFYAVSFVK-DAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAE--LPIE 348 (453)
Q Consensus 272 DI~~a~~~gvd~I~lSfV~-sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~sDgImIgRGDLg~e--lg~e 348 (453)
.++.+.+.|+|+|.++.-. ..++...+.+.+.+.|..+.+...-.|+ ++.+++++..+|.+.++.-.-+.. --.+
T Consensus 77 ~i~~~~~aGadgv~vh~e~~~~~~~~~~~~~i~~~g~~~gv~~~p~t~--~e~~~~~~~~~D~v~~msv~pg~ggq~~~~ 154 (230)
T 1tqj_A 77 YVEDFAKAGADIISVHVEHNASPHLHRTLCQIRELGKKAGAVLNPSTP--LDFLEYVLPVCDLILIMSVNPGFGGQSFIP 154 (230)
T ss_dssp THHHHHHHTCSEEEEECSTTTCTTHHHHHHHHHHTTCEEEEEECTTCC--GGGGTTTGGGCSEEEEESSCC----CCCCG
T ss_pred HHHHHHHcCCCEEEECcccccchhHHHHHHHHHHcCCcEEEEEeCCCc--HHHHHHHHhcCCEEEEEEeccccCCccCcH
Confidence 3456678899999888540 2244555556666655554444333555 455677777899887775443311 0012
Q ss_pred CHHHHHHHHHHHHHHc--CCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccCCCCHHHHHHHHHHH
Q 012943 349 DVPLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTV 425 (453)
Q Consensus 349 ~v~~aqk~Ii~~c~~a--Gkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I 425 (453)
......+++-+...+. +.|+.+. ..-.+.. +......|+|++...+.--..+-|.++++.|++.
T Consensus 155 ~~~~~i~~lr~~~~~~~~~~~I~v~--------GGI~~~~-----~~~~~~aGad~vvvGSai~~a~d~~~~~~~l~~~ 220 (230)
T 1tqj_A 155 EVLPKIRALRQMCDERGLDPWIEVD--------GGLKPNN-----TWQVLEAGANAIVAGSAVFNAPNYAEAIAGVRNS 220 (230)
T ss_dssp GGHHHHHHHHHHHHHHTCCCEEEEE--------SSCCTTT-----THHHHHHTCCEEEESHHHHTSSCHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHhcCCCCcEEEE--------CCcCHHH-----HHHHHHcCCCEEEECHHHHCCCCHHHHHHHHHHH
Confidence 2233333443333333 5666653 2223332 2345667999999875544556799999998764
No 52
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=91.00 E-value=1.8 Score=39.18 Aligned_cols=132 Identities=14% Similarity=0.113 Sum_probs=74.2
Q ss_pred HHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEe--cChhhhccHHHHHhh-cCEEEEeCCCccccCCCCC
Q 012943 273 IKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKI--ESADSIPNLHSIISA-SDGAMVARGDLGAELPIED 349 (453)
Q Consensus 273 I~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakI--ET~~gv~NldeI~~~-sDgImIgRGDLg~elg~e~ 349 (453)
++.+.+.|+|+|.++-....+.+..+++++.+.|..+. ++.. .|+.. .+.++... .|.+-+.++-.+...|..-
T Consensus 70 ~~~a~~~Gad~v~vh~~~~~~~~~~~~~~~~~~g~~~g-v~~~s~~~p~~--~~~~~~~~g~d~v~~~~~~~~~~~g~~~ 146 (207)
T 3ajx_A 70 ADIAFKAGADLVTVLGSADDSTIAGAVKAAQAHNKGVV-VDLIGIEDKAT--RAQEVRALGAKFVEMHAGLDEQAKPGFD 146 (207)
T ss_dssp HHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEE-EECTTCSSHHH--HHHHHHHTTCSEEEEECCHHHHTSTTCC
T ss_pred HHHHHhCCCCEEEEeccCChHHHHHHHHHHHHcCCceE-EEEecCCChHH--HHHHHHHhCCCEEEEEecccccccCCCc
Confidence 35567889999987655555677788888876654432 2122 12222 12233222 6877344343332233221
Q ss_pred HHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccCCCCHHHHHHHHHH
Q 012943 350 VPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHT 424 (453)
Q Consensus 350 v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~ 424 (453)
.. +++-+.+.. ..|+++. -.-.|. .+..++..|+|++...+---.-..|.++++.+++
T Consensus 147 ~~---~~i~~~~~~-~~pi~v~--------GGI~~~-----~~~~~~~aGad~vvvGsaI~~~~dp~~~~~~~~~ 204 (207)
T 3ajx_A 147 LN---GLLAAGEKA-RVPFSVA--------GGVKVA-----TIPAVQKAGAEVAVAGGAIYGAADPAAAAKELRA 204 (207)
T ss_dssp TH---HHHHHHHHH-TSCEEEE--------SSCCGG-----GHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHH
T ss_pred hH---HHHHHhhCC-CCCEEEE--------CCcCHH-----HHHHHHHcCCCEEEEeeeccCCCCHHHHHHHHHH
Confidence 11 333333333 6777663 222333 3446788999999987655555679999888765
No 53
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=90.75 E-value=1.8 Score=42.73 Aligned_cols=111 Identities=16% Similarity=0.204 Sum_probs=66.1
Q ss_pred HHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh-cCEEEE-eCCCccccCCCC
Q 012943 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMV-ARGDLGAELPIE 348 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~-sDgImI-gRGDLg~elg~e 348 (453)
+.++.+.+.|+|+|.+++-...+.+..++ +. .++++.++.+.+-.. .+.+. +|+|.+ |+ +-+-..|..
T Consensus 79 ~~~~~a~~~g~d~V~~~~g~p~~~i~~l~----~~--g~~v~~~v~~~~~a~---~~~~~GaD~i~v~g~-~~GG~~g~~ 148 (332)
T 2z6i_A 79 DIVDLVIEEGVKVVTTGAGNPSKYMERFH----EA--GIIVIPVVPSVALAK---RMEKIGADAVIAEGM-EAGGHIGKL 148 (332)
T ss_dssp HHHHHHHHTTCSEEEECSSCGGGTHHHHH----HT--TCEEEEEESSHHHHH---HHHHTTCSCEEEECT-TSSEECCSS
T ss_pred HHHHHHHHCCCCEEEECCCChHHHHHHHH----Hc--CCeEEEEeCCHHHHH---HHHHcCCCEEEEECC-CCCCCCCCc
Confidence 44666778999999998754444444443 32 578999998766433 33334 899988 43 222222311
Q ss_pred CHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEec
Q 012943 349 DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (453)
Q Consensus 349 ~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (453)
......+++ ....++|++.+ .+.-+. .++..++..|+|+|++.
T Consensus 149 ~~~~ll~~i---~~~~~iPViaa---------GGI~~~---~~~~~al~~GAdgV~vG 191 (332)
T 2z6i_A 149 TTMTLVRQV---ATAISIPVIAA---------GGIADG---EGAAAGFMLGAEAVQVG 191 (332)
T ss_dssp CHHHHHHHH---HHHCSSCEEEE---------SSCCSH---HHHHHHHHTTCSEEEEC
T ss_pred cHHHHHHHH---HHhcCCCEEEE---------CCCCCH---HHHHHHHHcCCCEEEec
Confidence 112222233 23457999886 333332 35667778899999985
No 54
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=90.58 E-value=2.4 Score=41.12 Aligned_cols=158 Identities=12% Similarity=0.038 Sum_probs=89.9
Q ss_pred CCHhhHHHH-HhhhhcCCcEEEeccccCHH------HHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh-cCEEEE
Q 012943 265 ITDKDWEDI-KFGVDNQVDFYAVSFVKDAK------VVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMV 336 (453)
Q Consensus 265 ltekD~~DI-~~a~~~gvd~I~lSfV~sa~------dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~-sDgImI 336 (453)
++..++..| +...+.|++.|-+.+-.+++ +..++-+.+.+. .++++.+.+-+ .+.++..++. .|.|++
T Consensus 23 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~-~~~~v~~l~~n---~~~i~~a~~~G~~~V~i 98 (295)
T 1ydn_A 23 VPTADKIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRA-DGVRYSVLVPN---MKGYEAAAAAHADEIAV 98 (295)
T ss_dssp CCHHHHHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC-SSSEEEEECSS---HHHHHHHHHTTCSEEEE
T ss_pred cCHHHHHHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhC-CCCEEEEEeCC---HHHHHHHHHCCCCEEEE
Confidence 566776554 55667899998875433333 233333333332 46666666533 2333333333 677777
Q ss_pred e--CCCcc----ccCCCCCHHHHHHHHHHHHHHcCCCEE--EEechhhhhccCCCCchHHHHHHHH-HHHhCccEEEecC
Q 012943 337 A--RGDLG----AELPIEDVPLLQEDIIRRCRSMQKPVI--VATNMLESMIDHPTPTRAEVSDIAI-AVREGADAVMLSG 407 (453)
Q Consensus 337 g--RGDLg----~elg~e~v~~aqk~Ii~~c~~aGkpvi--~aTqmLeSM~~~~~PtrAEv~Dv~n-av~~G~D~vmLs~ 407 (453)
. -.|.- ...+.++.....+++++.|+++|+.|- +.|-. +-.....-+..++.+++. +...|+|.+.|.
T Consensus 99 ~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~--~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~- 175 (295)
T 1ydn_A 99 FISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVV--ECPYDGPVTPQAVASVTEQLFSLGCHEVSLG- 175 (295)
T ss_dssp EEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSS--EETTTEECCHHHHHHHHHHHHHHTCSEEEEE-
T ss_pred EEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEe--cCCcCCCCCHHHHHHHHHHHHhcCCCEEEec-
Confidence 3 11111 124455666777889999999999985 32110 000011223344455443 446899999997
Q ss_pred cccCCCCHHHHHHHHHHHHHHH
Q 012943 408 ETAHGKFPLKAVKVMHTVALRT 429 (453)
Q Consensus 408 ETA~G~yP~eaV~~m~~I~~~a 429 (453)
.|.=...|.+.-+.++.|..+.
T Consensus 176 Dt~G~~~P~~~~~lv~~l~~~~ 197 (295)
T 1ydn_A 176 DTIGRGTPDTVAAMLDAVLAIA 197 (295)
T ss_dssp ETTSCCCHHHHHHHHHHHHTTS
T ss_pred CCCCCcCHHHHHHHHHHHHHhC
Confidence 4554467988888888886543
No 55
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=90.49 E-value=4.6 Score=38.08 Aligned_cols=135 Identities=16% Similarity=0.076 Sum_probs=79.7
Q ss_pred HHHHHhhhhcCCcEEEeccc--cCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh-cCEEEEeCCCcccc--
Q 012943 270 WEDIKFGVDNQVDFYAVSFV--KDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAE-- 344 (453)
Q Consensus 270 ~~DI~~a~~~gvd~I~lSfV--~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~-sDgImIgRGDLg~e-- 344 (453)
.+++..+.+.|+|+|.+.-. .+++.+.++-+++++. .+.+++.+-|.+-. ....+. +|.|.+.-..+...
T Consensus 91 ~~~i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~~--g~~v~~~v~t~eea---~~a~~~Gad~Ig~~~~g~t~~~~ 165 (232)
T 3igs_A 91 LDDVDALAQAGAAIIAVDGTARQRPVAVEALLARIHHH--HLLTMADCSSVDDG---LACQRLGADIIGTTMSGYTTPDT 165 (232)
T ss_dssp HHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHT--TCEEEEECCSHHHH---HHHHHTTCSEEECTTTTSSSSSC
T ss_pred HHHHHHHHHcCCCEEEECccccCCHHHHHHHHHHHHHC--CCEEEEeCCCHHHH---HHHHhCCCCEEEEcCccCCCCCC
Confidence 45566677899999976432 3566666666666554 56677765554332 222222 78775432222111
Q ss_pred CCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccCCCCHHHHHHHHHH
Q 012943 345 LPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHT 424 (453)
Q Consensus 345 lg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~ 424 (453)
.....+. ..+++ ++.++|++.. .+.-|. .|+..+...|+|++++. |++.+ |-+..+.+.+
T Consensus 166 ~~~~~~~-~i~~l----~~~~ipvIA~---------GGI~t~---~d~~~~~~~GadgV~VG--sal~~-p~~~~~~~~~ 225 (232)
T 3igs_A 166 PEEPDLP-LVKAL----HDAGCRVIAE---------GRYNSP---ALAAEAIRYGAWAVTVG--SAITR-LEHICGWYND 225 (232)
T ss_dssp CSSCCHH-HHHHH----HHTTCCEEEE---------SCCCSH---HHHHHHHHTTCSEEEEC--HHHHC-HHHHHHHHHH
T ss_pred CCCCCHH-HHHHH----HhcCCcEEEE---------CCCCCH---HHHHHHHHcCCCEEEEe--hHhcC-HHHHHHHHHH
Confidence 1112332 22222 2238898863 555554 45667788899999995 66665 8899888888
Q ss_pred HHHHH
Q 012943 425 VALRT 429 (453)
Q Consensus 425 I~~~a 429 (453)
.+.++
T Consensus 226 ~i~~~ 230 (232)
T 3igs_A 226 ALKKA 230 (232)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 77654
No 56
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=90.28 E-value=4.8 Score=40.08 Aligned_cols=159 Identities=9% Similarity=0.016 Sum_probs=97.0
Q ss_pred CCCHhhHHHH-H-hhhhcCCcEEEe-ccccCHHHHHHHHHHHHh-----cCCCceEEEEecChhhhccHHHHHhh-cC--
Q 012943 264 SITDKDWEDI-K-FGVDNQVDFYAV-SFVKDAKVVHELKDYLKS-----CNADIHVIVKIESADSIPNLHSIISA-SD-- 332 (453)
Q Consensus 264 ~ltekD~~DI-~-~a~~~gvd~I~l-SfV~sa~dv~~v~~~L~~-----~~~~i~IIakIET~~gv~NldeI~~~-sD-- 332 (453)
.++..|+..| + ...+.|+|.|=+ +|+.++.+.+.+++..+. .-.++.+.+.+=+.. .++..++. .|
T Consensus 37 ~~~~~~k~~i~~~~L~~~Gv~~IE~g~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~l~~~~~---~i~~a~~~g~~~v 113 (337)
T 3ble_A 37 SFSTSEKLNIAKFLLQKLNVDRVEIASARVSKGELETVQKIMEWAATEQLTERIEILGFVDGNK---TVDWIKDSGAKVL 113 (337)
T ss_dssp CCCHHHHHHHHHHHHHTTCCSEEEEEETTSCTTHHHHHHHHHHHHHHTTCGGGEEEEEESSTTH---HHHHHHHHTCCEE
T ss_pred CcCHHHHHHHHHHHHHHcCCCEEEEeCCCCChhHHHHHHHHHhhhhhhccCCCCeEEEEccchh---hHHHHHHCCCCEE
Confidence 3677777555 5 456689999887 556678666665554432 123456666655544 44444444 55
Q ss_pred EEEEeCCCccc----cCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHH-HHHhCccEEEecC
Q 012943 333 GAMVARGDLGA----ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI-AVREGADAVMLSG 407 (453)
Q Consensus 333 gImIgRGDLg~----elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~n-av~~G~D~vmLs~ 407 (453)
.++++-.|+-. ....++.......+++.|+++|+.|.+.... .-..+.-+...+.+++. +...|+|.+.| .
T Consensus 114 ~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l-~ 189 (337)
T 3ble_A 114 NLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLED---WSNGFRNSPDYVKSLVEHLSKEHIERIFL-P 189 (337)
T ss_dssp EEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEET---HHHHHHHCHHHHHHHHHHHHTSCCSEEEE-E
T ss_pred EEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEE---CCCCCcCCHHHHHHHHHHHHHcCCCEEEE-e
Confidence 44554444321 1223455566788899999999998765321 00011122333445544 45579999999 4
Q ss_pred cccCCCCHHHHHHHHHHHHHHH
Q 012943 408 ETAHGKFPLKAVKVMHTVALRT 429 (453)
Q Consensus 408 ETA~G~yP~eaV~~m~~I~~~a 429 (453)
+|.=...|.++-++++.+..+.
T Consensus 190 DT~G~~~P~~v~~lv~~l~~~~ 211 (337)
T 3ble_A 190 DTLGVLSPEETFQGVDSLIQKY 211 (337)
T ss_dssp CTTCCCCHHHHHHHHHHHHHHC
T ss_pred cCCCCcCHHHHHHHHHHHHHhc
Confidence 8887889999988888887664
No 57
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=90.23 E-value=5.6 Score=39.84 Aligned_cols=123 Identities=16% Similarity=0.199 Sum_probs=69.4
Q ss_pred hHHHHHhhhhc--CCcEEEeccc-cCHHHHHHHHHHHHhcCCCceEEEE-ecChhhhccHHHHHhh-cCEEEEeCCCccc
Q 012943 269 DWEDIKFGVDN--QVDFYAVSFV-KDAKVVHELKDYLKSCNADIHVIVK-IESADSIPNLHSIISA-SDGAMVARGDLGA 343 (453)
Q Consensus 269 D~~DI~~a~~~--gvd~I~lSfV-~sa~dv~~v~~~L~~~~~~i~IIak-IET~~gv~NldeI~~~-sDgImIgRGDLg~ 343 (453)
+.+.+...++. |+|.+.+... ....++.+.-+.+.+.-.+++|+++ +-|++-. ....++ +|+|.++-|-=+.
T Consensus 119 ~~~~~~~l~~~~~g~~~i~i~~~~g~~~~~~~~i~~lr~~~~~~~vi~g~v~t~e~A---~~a~~aGaD~I~v~~g~G~~ 195 (351)
T 2c6q_A 119 DFEQLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMV---EELILSGADIIKVGIGPGSV 195 (351)
T ss_dssp HHHHHHHHHHHCTTCCEEEEECSCTTBHHHHHHHHHHHHHCTTSEEEEEEECSHHHH---HHHHHTTCSEEEECSSCSTT
T ss_pred HHHHHHHHHhccCCCCEEEEEecCCCcHHHHHHHHHHHHhcCCCeEEEEeCCCHHHH---HHHHHhCCCEEEECCCCCcC
Confidence 44555555665 8998776422 1223333322334333335677754 5554333 333334 8999886321000
Q ss_pred c-------CCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecC
Q 012943 344 E-------LPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (453)
Q Consensus 344 e-------lg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 407 (453)
+ .+.+ ...+...+.+.+...++|+|.+ .+.-+ -.|++.++..|+|+|++..
T Consensus 196 ~~~r~~~g~~~p-~~~~l~~v~~~~~~~~ipvIa~---------GGI~~---g~di~kAlalGA~~V~vG~ 253 (351)
T 2c6q_A 196 CTTRKKTGVGYP-QLSAVMECADAAHGLKGHIISD---------GGCSC---PGDVAKAFGAGADFVMLGG 253 (351)
T ss_dssp BCHHHHHCBCCC-HHHHHHHHHHHHHHTTCEEEEE---------SCCCS---HHHHHHHHHTTCSEEEEST
T ss_pred cCccccCCCCcc-HHHHHHHHHHHHhhcCCcEEEe---------CCCCC---HHHHHHHHHcCCCceeccH
Confidence 1 1222 2334456667777788998875 33333 5689999999999998754
No 58
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=90.16 E-value=6.7 Score=40.98 Aligned_cols=123 Identities=20% Similarity=0.214 Sum_probs=72.9
Q ss_pred hHHHHHhhhhcCCcEEEe--ccccCHHHHHHHHHHHHhcCCCceEEEE-ecChhhhccHHHHHhhcCEEEEeC--CCccc
Q 012943 269 DWEDIKFGVDNQVDFYAV--SFVKDAKVVHELKDYLKSCNADIHVIVK-IESADSIPNLHSIISASDGAMVAR--GDLGA 343 (453)
Q Consensus 269 D~~DI~~a~~~gvd~I~l--SfV~sa~dv~~v~~~L~~~~~~i~IIak-IET~~gv~NldeI~~~sDgImIgR--GDLg~ 343 (453)
..+.++.+++.|+|+|.+ ++-... ...++-+.+.+.-.+++|+++ +.|.+....+.+ .-+|+|.+|. |--..
T Consensus 256 ~~~~a~~~~~aG~d~v~i~~~~G~~~-~~~~~i~~i~~~~~~~pvi~~~v~t~~~a~~l~~--aGad~I~vg~~~G~~~~ 332 (514)
T 1jcn_A 256 DKYRLDLLTQAGVDVIVLDSSQGNSV-YQIAMVHYIKQKYPHLQVIGGNVVTAAQAKNLID--AGVDGLRVGMGCGSICI 332 (514)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCCSH-HHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHH--HTCSEEEECSSCSCCBT
T ss_pred hHHHHHHHHHcCCCEEEeeccCCcch-hHHHHHHHHHHhCCCCceEecccchHHHHHHHHH--cCCCEEEECCCCCcccc
Confidence 456677788899999987 332222 222222223222236788874 777665444332 1289999953 31100
Q ss_pred -----cCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecC
Q 012943 344 -----ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (453)
Q Consensus 344 -----elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 407 (453)
..|.+ .......+.+.+.+.+.|+|.+ .+.-+ ..|+..++..|+|+|++..
T Consensus 333 t~~~~~~g~~-~~~~~~~~~~~~~~~~ipVia~---------GGI~~---~~di~kala~GAd~V~iG~ 388 (514)
T 1jcn_A 333 TQEVMACGRP-QGTAVYKVAEYARRFGVPIIAD---------GGIQT---VGHVVKALALGASTVMMGS 388 (514)
T ss_dssp TBCCCSCCCC-HHHHHHHHHHHHGGGTCCEEEE---------SCCCS---HHHHHHHHHTTCSEEEEST
T ss_pred cccccCCCcc-chhHHHHHHHHHhhCCCCEEEE---------CCCCC---HHHHHHHHHcCCCeeeECH
Confidence 02222 2344455566667779998874 33333 4678899999999999865
No 59
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=89.57 E-value=1.4 Score=41.74 Aligned_cols=131 Identities=10% Similarity=0.061 Sum_probs=77.7
Q ss_pred CcEEEeccccCHHHHHHHHH---HHHhcCCCceEEEEecChhhhccHHHHHh--hcCEEEEeCCCccccCCCCCHHHHHH
Q 012943 281 VDFYAVSFVKDAKVVHELKD---YLKSCNADIHVIVKIESADSIPNLHSIIS--ASDGAMVARGDLGAELPIEDVPLLQE 355 (453)
Q Consensus 281 vd~I~lSfV~sa~dv~~v~~---~L~~~~~~i~IIakIET~~gv~NldeI~~--~sDgImIgRGDLg~elg~e~v~~aqk 355 (453)
+|+|.+..-.+.+++...-+ .+++.|..+.+-.+-.|+ ++.+++++. ..|.+++..-+-|.. |-.-.+....
T Consensus 86 Ad~itvH~ea~~~~~~~~i~~~~~i~~~G~k~gvalnp~tp--~~~~~~~l~~g~~D~VlvmsV~pGf~-gq~f~~~~l~ 162 (227)
T 1tqx_A 86 SNQLTFHFEALNEDTERCIQLAKEIRDNNLWCGISIKPKTD--VQKLVPILDTNLINTVLVMTVEPGFG-GQSFMHDMMG 162 (227)
T ss_dssp SSEEEEEGGGGTTCHHHHHHHHHHHHTTTCEEEEEECTTSC--GGGGHHHHTTTCCSEEEEESSCTTCS-SCCCCGGGHH
T ss_pred CCEEEEeecCCccCHHHHHHHHHHHHHcCCeEEEEeCCCCc--HHHHHHHhhcCCcCEEEEeeeccCCC-CcccchHHHH
Confidence 89988765433325666666 777777766665545565 777899998 799998864433322 1111111222
Q ss_pred HHHHHHHHc-CCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccCCCCHHHHHHHHHHHHH
Q 012943 356 DIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVAL 427 (453)
Q Consensus 356 ~Ii~~c~~a-Gkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~ 427 (453)
+|-+..+.. +.++.+. -.-.+. .+..++..|+|.+...+---..+-|.++++.|++.+.
T Consensus 163 ki~~lr~~~~~~~I~Vd--------GGI~~~-----ti~~~~~aGAd~~V~GsaIf~~~d~~~~i~~l~~~~~ 222 (227)
T 1tqx_A 163 KVSFLRKKYKNLNIQVD--------GGLNIE-----TTEISASHGANIIVAGTSIFNAEDPKYVIDTMRVSVQ 222 (227)
T ss_dssp HHHHHHHHCTTCEEEEE--------SSCCHH-----HHHHHHHHTCCEEEESHHHHTCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCeEEEE--------CCCCHH-----HHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHHHHH
Confidence 222222222 4555543 121222 3556788899999986444445579999999988654
No 60
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=89.35 E-value=1 Score=41.68 Aligned_cols=137 Identities=10% Similarity=0.054 Sum_probs=75.6
Q ss_pred HhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceE-EEEecChhhhccHHHHHh-hcCEEEEeCCCccccCCCCCHH
Q 012943 274 KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHV-IVKIESADSIPNLHSIIS-ASDGAMVARGDLGAELPIEDVP 351 (453)
Q Consensus 274 ~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~I-IakIET~~gv~NldeI~~-~sDgImIgRGDLg~elg~e~v~ 351 (453)
+.+.+.|+|+|.++-....+.+.++.+.+++.|....+ +...-|++ .+.++.+ -.|.+.+..+-....-|..-.+
T Consensus 77 ~~~~~aGad~i~vh~~~~~~~~~~~~~~~~~~g~~~~~d~l~~~T~~---~~~~~~~~g~d~v~~~~~~~~~~~g~~~~~ 153 (218)
T 3jr2_A 77 RMAFEAGADWITVSAAAHIATIAACKKVADELNGEIQIEIYGNWTMQ---DAKAWVDLGITQAIYHRSRDAELAGIGWTT 153 (218)
T ss_dssp HHHHHHTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECCSSCCHH---HHHHHHHTTCCEEEEECCHHHHHHTCCSCH
T ss_pred HHHHhcCCCEEEEecCCCHHHHHHHHHHHHHhCCccceeeeecCCHH---HHHHHHHcCccceeeeeccccccCCCcCCH
Confidence 55568899999988655445567777777776654443 33345643 3444444 3676655433221111111112
Q ss_pred HHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccCCCCHHHHHHHHHHHHHH
Q 012943 352 LLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALR 428 (453)
Q Consensus 352 ~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~ 428 (453)
..-++|-+. +....|+++. -.-.|..+ ..++..|+|++...+--....-|.+++ .+++...+
T Consensus 154 ~~l~~i~~~-~~~~~pi~v~--------GGI~~~~~-----~~~~~aGAd~vvvGsaI~~a~dp~~a~-~l~~~~~~ 215 (218)
T 3jr2_A 154 DDLDKMRQL-SALGIELSIT--------GGIVPEDI-----YLFEGIKTKTFIAGRALAGAEGQQTAA-ALREQIDR 215 (218)
T ss_dssp HHHHHHHHH-HHTTCEEEEE--------SSCCGGGG-----GGGTTSCEEEEEESGGGSHHHHHHHHH-HHHHHHHH
T ss_pred HHHHHHHHH-hCCCCCEEEE--------CCCCHHHH-----HHHHHcCCCEEEEchhhcCCCCHHHHH-HHHHHHHh
Confidence 222333222 2346666653 22233332 357889999999875444455688888 77776654
No 61
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=89.17 E-value=5.5 Score=39.28 Aligned_cols=113 Identities=21% Similarity=0.250 Sum_probs=67.2
Q ss_pred HHHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh-cCEEEEeCCCccccCC-C
Q 012943 270 WEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELP-I 347 (453)
Q Consensus 270 ~~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~-sDgImIgRGDLg~elg-~ 347 (453)
.+.++.+++.|+|+|.+++-...+.+. .+.+. .++++.++-+.+-... ..+. +|+|.+-..+.+-..| .
T Consensus 92 ~~~~~~~~~~g~d~V~l~~g~p~~~~~----~l~~~--g~~v~~~v~s~~~a~~---a~~~GaD~i~v~g~~~GG~~G~~ 162 (326)
T 3bo9_A 92 DDLVKVCIEEKVPVVTFGAGNPTKYIR----ELKEN--GTKVIPVVASDSLARM---VERAGADAVIAEGMESGGHIGEV 162 (326)
T ss_dssp HHHHHHHHHTTCSEEEEESSCCHHHHH----HHHHT--TCEEEEEESSHHHHHH---HHHTTCSCEEEECTTSSEECCSS
T ss_pred HHHHHHHHHCCCCEEEECCCCcHHHHH----HHHHc--CCcEEEEcCCHHHHHH---HHHcCCCEEEEECCCCCccCCCc
Confidence 455666778999999998765444333 33332 5788888877654433 3333 8999883222332223 1
Q ss_pred CCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecC
Q 012943 348 EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (453)
Q Consensus 348 e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 407 (453)
..+ ....++ ....+.|++.+ .+.-+ ..|+..++..|+|+|++..
T Consensus 163 ~~~-~ll~~i---~~~~~iPviaa---------GGI~~---~~dv~~al~~GA~gV~vGs 206 (326)
T 3bo9_A 163 TTF-VLVNKV---SRSVNIPVIAA---------GGIAD---GRGMAAAFALGAEAVQMGT 206 (326)
T ss_dssp CHH-HHHHHH---HHHCSSCEEEE---------SSCCS---HHHHHHHHHHTCSEEEESH
T ss_pred cHH-HHHHHH---HHHcCCCEEEE---------CCCCC---HHHHHHHHHhCCCEEEech
Confidence 222 222222 33458998886 33333 4467788888999999753
No 62
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=88.99 E-value=2.8 Score=39.85 Aligned_cols=134 Identities=14% Similarity=0.063 Sum_probs=79.4
Q ss_pred HHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhc---------CCCceEEEEecChhhhccHHHHHhhcCEEEE---eC
Q 012943 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSC---------NADIHVIVKIESADSIPNLHSIISASDGAMV---AR 338 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~---------~~~i~IIakIET~~gv~NldeI~~~sDgImI---gR 338 (453)
.-++.+.+.|+|+|.+..- ...++..+.+.+.+. |..+.+-..-+|+ ++.+++++..+|.|.+ .+
T Consensus 83 ~~i~~~~~aGAd~itvH~e-a~~~~~~~i~~i~~~~~~~~~~~~g~~~gv~l~p~Tp--~~~l~~~l~~~D~vlvMsv~p 159 (237)
T 3cu2_A 83 EVAKAVVANGANLVTLQLE-QYHDFALTIEWLAKQKTTYANQVYPVLIGACLCPETP--ISELEPYLDQIDVIQLLTLDP 159 (237)
T ss_dssp HHHHHHHHTTCSEEEEETT-CTTSHHHHHHHHTTCEEEETTEEEECEEEEEECTTSC--GGGGTTTTTTCSEEEEESEET
T ss_pred HHHHHHHHcCCCEEEEecC-CcccHHHHHHHHHhcccccccccCCceEEEEEeCCCh--HHHHHHHhhcCceeeeeeecc
Confidence 4456677899999988754 445666666777665 4444444434565 6667788888998766 44
Q ss_pred CCccccCCCCCHHHHHHHHHH---HHHHc--CCCEEEEechhhhhccCCCCchHHHHHHHHHHH--hCccEEEecCcccC
Q 012943 339 GDLGAELPIEDVPLLQEDIIR---RCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVR--EGADAVMLSGETAH 411 (453)
Q Consensus 339 GDLg~elg~e~v~~aqk~Ii~---~c~~a--Gkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~--~G~D~vmLs~ETA~ 411 (453)
|==+. ...+...++|-+ ...+. +.++.+. +--+. ..+..++. .|+|++...+---.
T Consensus 160 gfggq----~f~~~~l~ki~~lr~~~~~~~~~~~I~vd----------GGI~~---~~~~~~~~~~aGad~~VvGSaIf~ 222 (237)
T 3cu2_A 160 RNGTK----YPSELILDRVIQVEKRLGNRRVEKLINID----------GSMTL---ELAKYFKQGTHQIDWLVSGSALFS 222 (237)
T ss_dssp TTTEE----CCHHHHHHHHHHHHHHHGGGGGGCEEEEE----------SSCCH---HHHHHHHHSSSCCCCEEECGGGGS
T ss_pred CcCCe----ecChhHHHHHHHHHHHHHhcCCCceEEEE----------CCcCH---HHHHHHHHhCCCCcEEEEeeHHhC
Confidence 31111 123333333332 22222 4565543 12222 23446677 89999998655444
Q ss_pred CCCHHHHHHHHHHH
Q 012943 412 GKFPLKAVKVMHTV 425 (453)
Q Consensus 412 G~yP~eaV~~m~~I 425 (453)
. -|.++++.|++.
T Consensus 223 ~-d~~~~~~~l~~~ 235 (237)
T 3cu2_A 223 G-ELKTNLKVWKSS 235 (237)
T ss_dssp S-CHHHHHHHHHHH
T ss_pred C-CHHHHHHHHHHh
Confidence 4 699999988764
No 63
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=88.85 E-value=4.8 Score=36.75 Aligned_cols=137 Identities=12% Similarity=0.090 Sum_probs=73.2
Q ss_pred HHHHHhhhhcCCcEEEecccc--CH-HHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh-cCEEEEeCCCccc-c
Q 012943 270 WEDIKFGVDNQVDFYAVSFVK--DA-KVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGA-E 344 (453)
Q Consensus 270 ~~DI~~a~~~gvd~I~lSfV~--sa-~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~-sDgImIgRGDLg~-e 344 (453)
.+.+..+.+.|+|+|.+.... ++ ..+.++-+.+.+.-.+..++..+-|.+-.. ...+. +|.|+++.....- .
T Consensus 78 ~~~i~~~~~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~~~t~~e~~---~~~~~G~d~i~~~~~g~t~~~ 154 (223)
T 1y0e_A 78 SKEVDELIESQCEVIALDATLQQRPKETLDELVSYIRTHAPNVEIMADIATVEEAK---NAARLGFDYIGTTLHGYTSYT 154 (223)
T ss_dssp HHHHHHHHHHTCSEEEEECSCSCCSSSCHHHHHHHHHHHCTTSEEEEECSSHHHHH---HHHHTTCSEEECTTTTSSTTS
T ss_pred HHHHHHHHhCCCCEEEEeeecccCcccCHHHHHHHHHHhCCCceEEecCCCHHHHH---HHHHcCCCEEEeCCCcCcCCC
Confidence 345666778899998876432 22 233333344443323456666665543222 22222 7898876432221 1
Q ss_pred CCCC-CHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccCCCCHHHHHHHHH
Q 012943 345 LPIE-DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMH 423 (453)
Q Consensus 345 lg~e-~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~ 423 (453)
.+.. ..+. ...+-+.+...+.|++.. .+.-+. .|+..++..|+|++++. +++-+ |-++.+.+.
T Consensus 155 ~~~~~~~~~-~~~~~~~~~~~~ipvia~---------GGI~~~---~~~~~~~~~Gad~v~vG--~al~~-p~~~~~~~~ 218 (223)
T 1y0e_A 155 QGQLLYQND-FQFLKDVLQSVDAKVIAE---------GNVITP---DMYKRVMDLGVHCSVVG--GAITR-PKEITKRFV 218 (223)
T ss_dssp TTCCTTHHH-HHHHHHHHHHCCSEEEEE---------SSCCSH---HHHHHHHHTTCSEEEEC--HHHHC-HHHHHHHHH
T ss_pred CCCCCCccc-HHHHHHHHhhCCCCEEEe---------cCCCCH---HHHHHHHHcCCCEEEEC--hHHcC-cHHHHHHHH
Confidence 1111 1221 222333344458888874 444453 45667777899999996 44433 777777765
Q ss_pred HH
Q 012943 424 TV 425 (453)
Q Consensus 424 ~I 425 (453)
+.
T Consensus 219 ~~ 220 (223)
T 1y0e_A 219 QV 220 (223)
T ss_dssp HT
T ss_pred HH
Confidence 43
No 64
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=88.52 E-value=2.9 Score=40.20 Aligned_cols=128 Identities=14% Similarity=0.084 Sum_probs=76.4
Q ss_pred CHhhH-HHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhh----------ccHHHHHhh-cCE
Q 012943 266 TDKDW-EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSI----------PNLHSIISA-SDG 333 (453)
Q Consensus 266 tekD~-~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv----------~NldeI~~~-sDg 333 (453)
+..|. +.++.+.+.|++.|+++. .-+.... ..++.++.++.+..++ ...++.++. +|+
T Consensus 39 ~~~di~~~~~~a~~~~~~av~v~~----~~v~~~~------~~~~~liv~~~~~~~~~g~~~~~~~~~~ve~Ai~~Ga~~ 108 (263)
T 1w8s_A 39 DSADPEYILRLARDAGFDGVVFQR----GIAEKYY------DGSVPLILKLNGKTTLYNGEPVSVANCSVEEAVSLGASA 108 (263)
T ss_dssp GGGCHHHHHHHHHHHTCSEEEECH----HHHHHHC------CSSSCEEEECEECCTTCCSSCCCEESSCHHHHHHTTCSE
T ss_pred chhhHHHHHHHHHhhCCCEEEECH----HHHHHhh------cCCCcEEEEEeCCCCcCCCCccchHHHHHHHHHHCCCCE
Confidence 45565 344778899999999873 3333222 3457788888776665 456666665 777
Q ss_pred EEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHH-HHHHHhCccEEEec
Q 012943 334 AMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDI-AIAVREGADAVMLS 406 (453)
Q Consensus 334 ImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv-~nav~~G~D~vmLs 406 (453)
|-+ |..++ +-...++....+++...|+++|.|+|+-+ .+.---.....+..++... --+...|+|.+=.+
T Consensus 109 v~~-~~nig-~~~~~~~~~~~~~v~~~~~~~~~~vIi~~-~~~G~~~~~~~s~~~i~~a~~~a~~~GAD~vkt~ 179 (263)
T 1w8s_A 109 VGY-TIYPG-SGFEWKMFEELARIKRDAVKFDLPLVVES-FPRGGKVVNETAPEIVAYAARIALELGADAMKIK 179 (263)
T ss_dssp EEE-EECTT-STTHHHHHHHHHHHHHHHHHHTCCEEEEE-CCCSTTCCCTTCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred EEE-EEecC-CcCHHHHHHHHHHHHHHHHHcCCeEEEEe-eCCCCccccCCCHHHHHHHHHHHHHcCCCEEEEc
Confidence 654 33333 11223455666888999999999987631 1100000000144455543 45778999998887
No 65
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=88.33 E-value=5.2 Score=45.58 Aligned_cols=120 Identities=13% Similarity=0.249 Sum_probs=68.6
Q ss_pred HhhhhcCCcEEEeccc---------------cCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh-----cCE
Q 012943 274 KFGVDNQVDFYAVSFV---------------KDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-----SDG 333 (453)
Q Consensus 274 ~~a~~~gvd~I~lSfV---------------~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~-----sDg 333 (453)
+.+.+.|+|+|.+.+- ++++.+.++-+.+.+. .+++|++|+ ++ .+.++.+++.. +|+
T Consensus 655 ~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~-~~~Pv~vK~-~~-~~~~~~~~a~~~~~~G~d~ 731 (1025)
T 1gte_A 655 RKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQA-VQIPFFAKL-TP-NVTDIVSIARAAKEGGADG 731 (1025)
T ss_dssp HHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHH-CSSCEEEEE-CS-CSSCHHHHHHHHHHHTCSE
T ss_pred HHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHh-hCCceEEEe-CC-ChHHHHHHHHHHHHcCCCE
Confidence 4445689999988542 3344444444444432 257899998 33 44566666654 699
Q ss_pred EEEe-----C------------------CCccccCCCCCHHHHHHHHHHHHHHc-CCCEEEEechhhhhccCCCCchHHH
Q 012943 334 AMVA-----R------------------GDLGAELPIEDVPLLQEDIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAEV 389 (453)
Q Consensus 334 ImIg-----R------------------GDLg~elg~e~v~~aqk~Ii~~c~~a-Gkpvi~aTqmLeSM~~~~~PtrAEv 389 (453)
|.+. + ...+---|....+.....+-+..++. +.|+|.. .+.-+ .
T Consensus 732 i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~~~~~ipvi~~---------GGI~s---~ 799 (1025)
T 1gte_A 732 VTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARALPGFPILAT---------GGIDS---A 799 (1025)
T ss_dssp EEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHHHSTTCCEEEE---------SSCCS---H
T ss_pred EEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHHHHcCCCCEEEe---------cCcCC---H
Confidence 9881 1 11111112222333333333344444 6888764 44444 4
Q ss_pred HHHHHHHHhCccEEEecCc
Q 012943 390 SDIAIAVREGADAVMLSGE 408 (453)
Q Consensus 390 ~Dv~nav~~G~D~vmLs~E 408 (453)
.|+..++..|+|+||+...
T Consensus 800 ~da~~~l~~Ga~~v~vg~~ 818 (1025)
T 1gte_A 800 ESGLQFLHSGASVLQVCSA 818 (1025)
T ss_dssp HHHHHHHHTTCSEEEESHH
T ss_pred HHHHHHHHcCCCEEEEeec
Confidence 5777888899999999643
No 66
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=88.33 E-value=4.7 Score=37.16 Aligned_cols=137 Identities=15% Similarity=0.138 Sum_probs=75.1
Q ss_pred HHHHhhhhcCCcEEEeccc--cCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhhcCEEEEe---CCCccccC
Q 012943 271 EDIKFGVDNQVDFYAVSFV--KDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVA---RGDLGAEL 345 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lSfV--~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~sDgImIg---RGDLg~el 345 (453)
+.++.+.+.|+|+|.+.-- .+ ++..++.+.+.+.+ ..++.-+-+..-.+.+.++...+|.+++. +|--+...
T Consensus 82 ~~v~~~~~~Gad~v~vh~~~~~~-~~~~~~~~~~~~~g--~~ig~~~~p~t~~e~~~~~~~~~d~vl~~~~~pg~~g~~~ 158 (230)
T 1rpx_A 82 QRVPDFIKAGADIVSVHCEQSST-IHLHRTINQIKSLG--AKAGVVLNPGTPLTAIEYVLDAVDLVLIMSVNPGFGGQSF 158 (230)
T ss_dssp HHHHHHHHTTCSEEEEECSTTTC-SCHHHHHHHHHHTT--SEEEEEECTTCCGGGGTTTTTTCSEEEEESSCTTCSSCCC
T ss_pred HHHHHHHHcCCCEEEEEecCccc-hhHHHHHHHHHHcC--CcEEEEeCCCCCHHHHHHHHhhCCEEEEEEEcCCCCCccc
Confidence 3555567889999987754 33 34445555565544 44555552222334455555568877433 33223222
Q ss_pred CCCCHHHHHHHHHHHHHHc--CCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccCCCCHHHHHHHHH
Q 012943 346 PIEDVPLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMH 423 (453)
Q Consensus 346 g~e~v~~aqk~Ii~~c~~a--Gkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~ 423 (453)
.. ......+++-+.+.+. ..|+++. ..-.|. .+..++..|+|++...+---..+.|.++++.++
T Consensus 159 ~~-~~~~~i~~l~~~~~~~~~~~pi~v~--------GGI~~~-----n~~~~~~aGad~vvvgSaI~~a~dp~~a~~~l~ 224 (230)
T 1rpx_A 159 IE-SQVKKISDLRKICAERGLNPWIEVD--------GGVGPK-----NAYKVIEAGANALVAGSAVFGAPDYAEAIKGIK 224 (230)
T ss_dssp CT-THHHHHHHHHHHHHHHTCCCEEEEE--------SSCCTT-----THHHHHHHTCCEEEESHHHHTSSCHHHHHHHHH
T ss_pred cH-HHHHHHHHHHHHHHhcCCCceEEEE--------CCCCHH-----HHHHHHHcCCCEEEEChhhhCCCCHHHHHHHHH
Confidence 22 2222223333333222 5676664 233343 233456679999999876656667999988876
Q ss_pred H
Q 012943 424 T 424 (453)
Q Consensus 424 ~ 424 (453)
+
T Consensus 225 ~ 225 (230)
T 1rpx_A 225 T 225 (230)
T ss_dssp T
T ss_pred H
Confidence 4
No 67
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=88.28 E-value=14 Score=36.44 Aligned_cols=157 Identities=13% Similarity=0.115 Sum_probs=99.9
Q ss_pred CCHhhHHHH-HhhhhcCCcEEEecc-ccCHHHHHHHHHHHHhcCCCceEEEEe-cChhhhccHHHHHhh--cC--EEEEe
Q 012943 265 ITDKDWEDI-KFGVDNQVDFYAVSF-VKDAKVVHELKDYLKSCNADIHVIVKI-ESADSIPNLHSIISA--SD--GAMVA 337 (453)
Q Consensus 265 ltekD~~DI-~~a~~~gvd~I~lSf-V~sa~dv~~v~~~L~~~~~~i~IIakI-ET~~gv~NldeI~~~--sD--gImIg 337 (453)
++..|+-.| +...+.|++.|=+.| +.++.|...++..... ..++.+.+-. =+.++++..-+-+.. .| .++++
T Consensus 25 ~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~-~~~~~i~~l~r~~~~~i~~a~~al~~ag~~~v~i~~s 103 (325)
T 3eeg_A 25 LNTEEKIIVAKALDELGVDVIEAGFPVSSPGDFNSVVEITKA-VTRPTICALTRAKEADINIAGEALRFAKRSRIHTGIG 103 (325)
T ss_dssp CCTTHHHHHHHHHHHHTCSEEEEECTTSCHHHHHHHHHHHHH-CCSSEEEEECCSCHHHHHHHHHHHTTCSSEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCCCHhHHHHHHHHHHh-CCCCEEEEeecCCHHHHHHHHHhhcccCCCEEEEEec
Confidence 455666555 445678999987754 4578788777665544 3556665554 234455433222221 23 46777
Q ss_pred CCCcccc----CCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHH-HhCccEEEecCcccCC
Q 012943 338 RGDLGAE----LPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAV-REGADAVMLSGETAHG 412 (453)
Q Consensus 338 RGDLg~e----lg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav-~~G~D~vmLs~ETA~G 412 (453)
-.|+-.. ...++.......+++.|+++|+.|.+..+ ....-+...+.+++..+ ..|+|.+-| .+|.=.
T Consensus 104 ~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~f~~~------d~~~~~~~~~~~~~~~~~~~G~~~i~l-~DT~G~ 176 (325)
T 3eeg_A 104 SSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVEFFCE------DAGRADQAFLARMVEAVIEAGADVVNI-PDTTGY 176 (325)
T ss_dssp CSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEEEEEE------TGGGSCHHHHHHHHHHHHHHTCSEEEC-CBSSSC
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEcc------ccccchHHHHHHHHHHHHhcCCCEEEe-cCccCC
Confidence 7776433 23466667778899999999999876433 11122333455665554 459999888 589988
Q ss_pred CCHHHHHHHHHHHHHHH
Q 012943 413 KFPLKAVKVMHTVALRT 429 (453)
Q Consensus 413 ~yP~eaV~~m~~I~~~a 429 (453)
..|.++-+++..+..+.
T Consensus 177 ~~P~~v~~lv~~l~~~~ 193 (325)
T 3eeg_A 177 MLPWQYGERIKYLMDNV 193 (325)
T ss_dssp CCHHHHHHHHHHHHHHC
T ss_pred cCHHHHHHHHHHHHHhC
Confidence 99999888888887654
No 68
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=88.26 E-value=7.3 Score=37.33 Aligned_cols=74 Identities=11% Similarity=0.098 Sum_probs=48.6
Q ss_pred HhhHHH-HHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCC-CceEEEEe--cC-hhhhccHHHHHhh-cCEEEEeCCC
Q 012943 267 DKDWED-IKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNA-DIHVIVKI--ES-ADSIPNLHSIISA-SDGAMVARGD 340 (453)
Q Consensus 267 ekD~~D-I~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~-~i~IIakI--ET-~~gv~NldeI~~~-sDgImIgRGD 340 (453)
.+.+.. .+.+.+.|+|||..||..+.++++.+++.. +. .+..+--| +| .++++|+.+.+++ ++|+.+||.=
T Consensus 158 ~~~i~~a~~~a~~~GAD~vkt~~~~~~e~~~~~~~~~---~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~GvsvgraI 234 (263)
T 1w8s_A 158 PEIVAYAARIALELGADAMKIKYTGDPKTFSWAVKVA---GKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRNV 234 (263)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCSSHHHHHHHHHHT---TTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEESHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHhC---CCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEehhh
Confidence 444443 356778999999999866777777776544 22 23333334 23 4566788887776 7899999875
Q ss_pred ccc
Q 012943 341 LGA 343 (453)
Q Consensus 341 Lg~ 343 (453)
+..
T Consensus 235 ~~~ 237 (263)
T 1w8s_A 235 WQR 237 (263)
T ss_dssp HTS
T ss_pred cCC
Confidence 444
No 69
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=87.97 E-value=2.2 Score=41.41 Aligned_cols=150 Identities=15% Similarity=0.148 Sum_probs=93.5
Q ss_pred CCCCCHhhHHHH-Hhhhhc--CCcEEEeccccCHHHHHHHHHHHHhcCC-CceEEEEecChhhhccHHHHHhh-------
Q 012943 262 LPSITDKDWEDI-KFGVDN--QVDFYAVSFVKDAKVVHELKDYLKSCNA-DIHVIVKIESADSIPNLHSIISA------- 330 (453)
Q Consensus 262 lp~ltekD~~DI-~~a~~~--gvd~I~lSfV~sa~dv~~v~~~L~~~~~-~i~IIakIET~~gv~NldeI~~~------- 330 (453)
-|..|+.|.+.+ +.+.+. +++.|+++ +..+..++++|...+. .++|.+-|==|.|-.+.+..+..
T Consensus 22 ~p~~t~~~i~~lc~eA~~~~~~~~aVcV~----p~~v~~a~~~L~~~g~~~v~v~tVigFP~G~~~~~~Kv~E~~~Av~~ 97 (260)
T 1p1x_A 22 NDDDTDEKVIALCHQAKTPVGNTAAICIY----PRFIPIARKTLKEQGTPEIRIATVTNFPHGNDDIDIALAETRAAIAY 97 (260)
T ss_dssp CTTCCHHHHHHHHHHTEETTEECSEEECC----GGGHHHHHHHHHHTTCTTSEEEEEESTTTCCSCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhccCCceEEEEC----HHHHHHHHHHhhhcCCCCceEEEEeCCCCCCCcHHHHHHHHHHHHHc
Confidence 366688887665 667778 89988765 5667778888864344 67888777444544444432221
Q ss_pred -cCEEEE--eCCCccccCCCCCHHHHHHHHHHHHHHcCCC--EEEEechhhhhccCCCCchHH-HHH-HHHHHHhCccEE
Q 012943 331 -SDGAMV--ARGDLGAELPIEDVPLLQEDIIRRCRSMQKP--VIVATNMLESMIDHPTPTRAE-VSD-IAIAVREGADAV 403 (453)
Q Consensus 331 -sDgImI--gRGDLg~elg~e~v~~aqk~Ii~~c~~aGkp--vi~aTqmLeSM~~~~~PtrAE-v~D-v~nav~~G~D~v 403 (453)
+|.|-+ -.|-| .+=.++.+..-.+.+.++|...|+| ||+.|-.| +..| +.. .--+...|+|.|
T Consensus 98 GAdEIDmVinig~l-~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L---------~d~e~i~~a~~ia~eaGADfV 167 (260)
T 1p1x_A 98 GADEVDVVFPYRAL-MAGNEQVGFDLVKACKEACAAANVLLKVIIETGEL---------KDEALIRKASEISIKAGADFI 167 (260)
T ss_dssp TCSEEEEECCHHHH-HTTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHHH---------CSHHHHHHHHHHHHHTTCSEE
T ss_pred CCCEEEEeccHHhh-hCCCHHHHHHHHHHHHHHhcccCCeEEEEEecccC---------CcHHHHHHHHHHHHHhCCCEE
Confidence 454422 11111 0001245666678888888877787 47766655 4455 323 334567899998
Q ss_pred EecCcccCCCC----HHHHHHHHHHHHHHH
Q 012943 404 MLSGETAHGKF----PLKAVKVMHTVALRT 429 (453)
Q Consensus 404 mLs~ETA~G~y----P~eaV~~m~~I~~~a 429 (453)
=-| .|.. -+|.|+.|++.+++.
T Consensus 168 KTS----TGf~~~gAt~e~v~lm~~~I~~~ 193 (260)
T 1p1x_A 168 KTS----TGKVAVNATPESARIMMEVIRDM 193 (260)
T ss_dssp ECC----CSCSSCCCCHHHHHHHHHHHHHH
T ss_pred EeC----CCCCCCCCCHHHHHHHHHHHHHh
Confidence 766 4444 469999999998764
No 70
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=87.29 E-value=5 Score=37.75 Aligned_cols=131 Identities=12% Similarity=0.033 Sum_probs=74.9
Q ss_pred HHHHHhhhhcCCcEEEeccc--cCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh-cCEEEEeCCCcccc--
Q 012943 270 WEDIKFGVDNQVDFYAVSFV--KDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAE-- 344 (453)
Q Consensus 270 ~~DI~~a~~~gvd~I~lSfV--~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~-sDgImIgRGDLg~e-- 344 (453)
.+++..+.+.|+|+|.+--. .+++.+.++-+++++. .+.+++.+-|.+-. ....+. +|.|-+.-.++...
T Consensus 91 ~~~i~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~~--g~~v~~~v~t~eea---~~a~~~Gad~Ig~~~~g~t~~~~ 165 (229)
T 3q58_A 91 LQDVDALAQAGADIIAFDASFRSRPVDIDSLLTRIRLH--GLLAMADCSTVNEG---ISCHQKGIEFIGTTLSGYTGPIT 165 (229)
T ss_dssp HHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHT--TCEEEEECSSHHHH---HHHHHTTCSEEECTTTTSSSSCC
T ss_pred HHHHHHHHHcCCCEEEECccccCChHHHHHHHHHHHHC--CCEEEEecCCHHHH---HHHHhCCCCEEEecCccCCCCCc
Confidence 45566677899999976432 3566666666666554 56677765543322 222222 78775432222111
Q ss_pred CCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccCCCCHHHHHHHHHH
Q 012943 345 LPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHT 424 (453)
Q Consensus 345 lg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~ 424 (453)
.....+ ...+++ ++.+.|++. ..+.-|. .|+..+...|+|++++. |++.+ |-...+.+.+
T Consensus 166 ~~~~~~-~li~~l----~~~~ipvIA---------~GGI~t~---~d~~~~~~~GadgV~VG--sai~~-p~~~~~~f~~ 225 (229)
T 3q58_A 166 PVEPDL-AMVTQL----SHAGCRVIA---------EGRYNTP---ALAANAIEHGAWAVTVG--SAITR-IEHICQWFSH 225 (229)
T ss_dssp CSSCCH-HHHHHH----HTTTCCEEE---------ESSCCSH---HHHHHHHHTTCSEEEEC--HHHHC-HHHHHHHHHH
T ss_pred CCCCCH-HHHHHH----HHcCCCEEE---------ECCCCCH---HHHHHHHHcCCCEEEEc--hHhcC-hHHHHHHHHH
Confidence 111233 222222 233888886 3555554 45667778899999995 66655 7777776655
Q ss_pred H
Q 012943 425 V 425 (453)
Q Consensus 425 I 425 (453)
.
T Consensus 226 ~ 226 (229)
T 3q58_A 226 A 226 (229)
T ss_dssp H
T ss_pred H
Confidence 4
No 71
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=87.26 E-value=7 Score=36.67 Aligned_cols=104 Identities=13% Similarity=0.174 Sum_probs=66.0
Q ss_pred HHHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh-cCEEEEeCCCccccCCCC
Q 012943 270 WEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIE 348 (453)
Q Consensus 270 ~~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~-sDgImIgRGDLg~elg~e 348 (453)
.+.++.+++.|++.|-+.+ +++.....++++-.+.. ++.+-+- |.---+.++.-+++ +|++..+-.|
T Consensus 32 ~~~~~al~~gGv~~iel~~-k~~~~~~~i~~l~~~~~-~l~vgaG--tvl~~d~~~~A~~aGAd~v~~p~~d-------- 99 (224)
T 1vhc_A 32 LPLADTLAKNGLSVAEITF-RSEAAADAIRLLRANRP-DFLIAAG--TVLTAEQVVLAKSSGADFVVTPGLN-------- 99 (224)
T ss_dssp HHHHHHHHHTTCCEEEEET-TSTTHHHHHHHHHHHCT-TCEEEEE--SCCSHHHHHHHHHHTCSEEECSSCC--------
T ss_pred HHHHHHHHHcCCCEEEEec-cCchHHHHHHHHHHhCc-CcEEeeC--cEeeHHHHHHHHHCCCCEEEECCCC--------
Confidence 3455777899999999986 45655555555544443 4444443 22222444444444 8999765433
Q ss_pred CHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEe
Q 012943 349 DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVML 405 (453)
Q Consensus 349 ~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmL 405 (453)
..+++.|++.|++++.- ..| .+++..+...|+|.+.+
T Consensus 100 ------~~v~~~ar~~g~~~i~G-----------v~t---~~e~~~A~~~Gad~vk~ 136 (224)
T 1vhc_A 100 ------PKIVKLCQDLNFPITPG-----------VNN---PMAIEIALEMGISAVKF 136 (224)
T ss_dssp ------HHHHHHHHHTTCCEECE-----------ECS---HHHHHHHHHTTCCEEEE
T ss_pred ------HHHHHHHHHhCCCEEec-----------cCC---HHHHHHHHHCCCCEEEE
Confidence 45678899999998763 123 23356788999999999
No 72
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=86.13 E-value=14 Score=36.71 Aligned_cols=112 Identities=18% Similarity=0.238 Sum_probs=64.1
Q ss_pred HHHHHhhhhcCCcEEEeccccC-HHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh-cCEEEE-eCCCccccCC
Q 012943 270 WEDIKFGVDNQVDFYAVSFVKD-AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMV-ARGDLGAELP 346 (453)
Q Consensus 270 ~~DI~~a~~~gvd~I~lSfV~s-a~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~-sDgImI-gRGDLg~elg 346 (453)
.+.++.+.+.|+|+|.+++-.. .+.+..+++ . .+.++.++-|.+-. ....+. +|+|.+ |+. .|-..|
T Consensus 112 ~~~~~~~~~~g~~~V~~~~g~~~~~~i~~~~~----~--g~~v~~~v~t~~~a---~~a~~~GaD~i~v~g~~-~GGh~g 181 (369)
T 3bw2_A 112 DAKLAVLLDDPVPVVSFHFGVPDREVIARLRR----A--GTLTLVTATTPEEA---RAVEAAGADAVIAQGVE-AGGHQG 181 (369)
T ss_dssp HHHHHHHHHSCCSEEEEESSCCCHHHHHHHHH----T--TCEEEEEESSHHHH---HHHHHTTCSEEEEECTT-CSEECC
T ss_pred HHHHHHHHhcCCCEEEEeCCCCcHHHHHHHHH----C--CCeEEEECCCHHHH---HHHHHcCCCEEEEeCCC-cCCcCC
Confidence 3556777889999999887542 344444433 2 46788888765432 222222 799999 542 211111
Q ss_pred C-----------CCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEec
Q 012943 347 I-----------EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (453)
Q Consensus 347 ~-----------e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (453)
. .......+++ ....++|++.+ .+.-+. .++..++..|+|+|++.
T Consensus 182 ~~~~~~~~~~~~~~~~~~l~~i---~~~~~iPViaa---------GGI~~~---~~~~~~l~~GAd~V~vG 237 (369)
T 3bw2_A 182 THRDSSEDDGAGIGLLSLLAQV---REAVDIPVVAA---------GGIMRG---GQIAAVLAAGADAAQLG 237 (369)
T ss_dssp CSSCCGGGTTCCCCHHHHHHHH---HHHCSSCEEEE---------SSCCSH---HHHHHHHHTTCSEEEES
T ss_pred CcccccccccccccHHHHHHHH---HHhcCceEEEE---------CCCCCH---HHHHHHHHcCCCEEEEC
Confidence 1 0112222222 22358899886 333232 45667788999999975
No 73
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=86.08 E-value=9.3 Score=36.95 Aligned_cols=130 Identities=16% Similarity=0.158 Sum_probs=78.5
Q ss_pred HHHhhhhcCCcEEEec-cccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhhcCEEEEeCCCccc-cCCCCC
Q 012943 272 DIKFGVDNQVDFYAVS-FVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGA-ELPIED 349 (453)
Q Consensus 272 DI~~a~~~gvd~I~lS-fV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~sDgImIgRGDLg~-elg~e~ 349 (453)
.+..+...|+|+|.+. -.-+.+++.++.++..+.| +.+++-+-|.+-++...+ .-+|.|-+...||.. +.+++.
T Consensus 127 qv~~A~~~GAD~VlLi~a~l~~~~l~~l~~~a~~lG--l~~lvev~t~ee~~~A~~--~Gad~IGv~~r~l~~~~~dl~~ 202 (272)
T 3qja_A 127 QIHEARAHGADMLLLIVAALEQSVLVSMLDRTESLG--MTALVEVHTEQEADRALK--AGAKVIGVNARDLMTLDVDRDC 202 (272)
T ss_dssp HHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHH--HTCSEEEEESBCTTTCCBCTTH
T ss_pred HHHHHHHcCCCEEEEecccCCHHHHHHHHHHHHHCC--CcEEEEcCCHHHHHHHHH--CCCCEEEECCCcccccccCHHH
Confidence 3555667899999882 2234566766666666554 445555555443322221 127888888777643 223333
Q ss_pred HHHHHHHHHHHHHHc--CCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccCCCCHHHHHHHHHH
Q 012943 350 VPLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHT 424 (453)
Q Consensus 350 v~~aqk~Ii~~c~~a--Gkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~ 424 (453)
+. ++ +... ++|++. ..+.-|. .|+..+...|+|+++...---....|-++++.+..
T Consensus 203 ~~----~l---~~~v~~~~pvVa---------egGI~t~---edv~~l~~~GadgvlVGsal~~a~dp~~~~~~l~~ 260 (272)
T 3qja_A 203 FA----RI---APGLPSSVIRIA---------ESGVRGT---ADLLAYAGAGADAVLVGEGLVTSGDPRAAVADLVT 260 (272)
T ss_dssp HH----HH---GGGSCTTSEEEE---------ESCCCSH---HHHHHHHHTTCSEEEECHHHHTCSCHHHHHHHHHT
T ss_pred HH----HH---HHhCcccCEEEE---------ECCCCCH---HHHHHHHHcCCCEEEEcHHHhCCCCHHHHHHHHHh
Confidence 22 22 2222 677765 3555554 45667788899999986554466789999888764
No 74
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=86.08 E-value=7.9 Score=35.50 Aligned_cols=137 Identities=11% Similarity=0.071 Sum_probs=76.9
Q ss_pred hhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceE-EE-EecChhhhccHHHHHhhcCEEEEeCCCccccCCCCCHHH
Q 012943 275 FGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHV-IV-KIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPL 352 (453)
Q Consensus 275 ~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~I-Ia-kIET~~gv~NldeI~~~sDgImIgRGDLg~elg~e~v~~ 352 (453)
.+.+.|+|+|.+...-..+.+..+.+++++.|....+ +. -+ |....+.+.++ -.+-+.+.++-++.+.|+.-.+.
T Consensus 75 ~~~~~Gad~itvh~~~g~~~l~~~~~~~~~~g~~~~~~ll~~~-t~~~~~~l~~~--~~~~~vl~~a~~~~~~G~~g~~~ 151 (216)
T 1q6o_A 75 MCFEANADWVTVICCADINTAKGALDVAKEFNGDVQIELTGYW-TWEQAQQWRDA--GIGQVVYHRSRDAQAAGVAWGEA 151 (216)
T ss_dssp HHHHTTCSEEEEETTSCHHHHHHHHHHHHHTTCEEEEEECSCC-CHHHHHHHHHT--TCCEEEEECCHHHHHTTCCCCHH
T ss_pred HHHhCCCCEEEEeccCCHHHHHHHHHHHHHcCCCceeeeeeCC-ChhhHHHHHhc--CcHHHHHHHHHHHHhcCCCCCHH
Confidence 4557899999987655544477777778776554322 11 11 12233344332 14455555555566666543122
Q ss_pred HHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccCCCCHHHHHHHHHHHHHH
Q 012943 353 LQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALR 428 (453)
Q Consensus 353 aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~ 428 (453)
-.+.+-+.+ ..+.|+++. -...|.. +..++..|+|.+....---...-|.++++.+++.+.+
T Consensus 152 ~i~~lr~~~-~~~~~i~v~--------GGI~~~~-----~~~~~~aGad~ivvG~~I~~a~dp~~~~~~~~~~i~~ 213 (216)
T 1q6o_A 152 DITAIKRLS-DMGFKVTVT--------GGLALED-----LPLFKGIPIHVFIAGRSIRDAASPVEAARQFKRSIAE 213 (216)
T ss_dssp HHHHHHHHH-HTTCEEEEE--------SSCCGGG-----GGGGTTSCCSEEEESHHHHTSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhc-CCCCcEEEE--------CCcChhh-----HHHHHHcCCCEEEEeehhcCCCCHHHHHHHHHHHHHh
Confidence 222333333 234555553 2223333 3467888999999865544455799999999876654
No 75
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=85.94 E-value=12 Score=35.07 Aligned_cols=118 Identities=13% Similarity=0.121 Sum_probs=72.5
Q ss_pred HHHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh-cCEEEEeCCCccccCCCC
Q 012943 270 WEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIE 348 (453)
Q Consensus 270 ~~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~-sDgImIgRGDLg~elg~e 348 (453)
.+.++.+++.|++.|-+.+ +++.....++..-.+. .++.+-+- |.---+.++.-+++ +|++..+-.|
T Consensus 41 ~~~~~al~~gGv~~iel~~-k~~~~~~~i~~l~~~~-~~~~igag--tvl~~d~~~~A~~aGAd~v~~p~~d-------- 108 (225)
T 1mxs_A 41 LPLADALAAGGIRTLEVTL-RSQHGLKAIQVLREQR-PELCVGAG--TVLDRSMFAAVEAAGAQFVVTPGIT-------- 108 (225)
T ss_dssp HHHHHHHHHTTCCEEEEES-SSTHHHHHHHHHHHHC-TTSEEEEE--CCCSHHHHHHHHHHTCSSEECSSCC--------
T ss_pred HHHHHHHHHCCCCEEEEec-CCccHHHHHHHHHHhC-cccEEeeC--eEeeHHHHHHHHHCCCCEEEeCCCC--------
Confidence 3555777889999998886 4555555555444443 34444443 22111334433333 7888865333
Q ss_pred CHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccCCCCHHHH---HHHHHHH
Q 012943 349 DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKA---VKVMHTV 425 (453)
Q Consensus 349 ~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~ea---V~~m~~I 425 (453)
..++..|+..|.+.+.- .-| .+++..+...|+|.+.+ ||-++ .++++.+
T Consensus 109 ------~~v~~~~~~~g~~~i~G-----------~~t---~~e~~~A~~~Gad~vk~--------FPa~~~~G~~~lk~i 160 (225)
T 1mxs_A 109 ------EDILEAGVDSEIPLLPG-----------IST---PSEIMMGYALGYRRFKL--------FPAEISGGVAAIKAF 160 (225)
T ss_dssp ------HHHHHHHHHCSSCEECE-----------ECS---HHHHHHHHTTTCCEEEE--------TTHHHHTHHHHHHHH
T ss_pred ------HHHHHHHHHhCCCEEEe-----------eCC---HHHHHHHHHCCCCEEEE--------ccCccccCHHHHHHH
Confidence 36888899999997752 122 23456888999999999 88554 3566665
Q ss_pred HH
Q 012943 426 AL 427 (453)
Q Consensus 426 ~~ 427 (453)
..
T Consensus 161 ~~ 162 (225)
T 1mxs_A 161 GG 162 (225)
T ss_dssp HT
T ss_pred Hh
Confidence 43
No 76
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=85.89 E-value=6.7 Score=36.33 Aligned_cols=134 Identities=15% Similarity=0.173 Sum_probs=76.0
Q ss_pred HHHHHhhhhcCCcEEEec-----cccC----HHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh-cCEEEEeCC
Q 012943 270 WEDIKFGVDNQVDFYAVS-----FVKD----AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARG 339 (453)
Q Consensus 270 ~~DI~~a~~~gvd~I~lS-----fV~s----a~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~-sDgImIgRG 339 (453)
.++++.+.+.|+|++-+- |+.. .+.+.++++.. .....+-.++..++ +.++..+++ +|++.+--+
T Consensus 22 ~~~i~~~~~~Gad~i~l~i~Dg~fv~~~~~~~~~~~~lr~~~---~~~~~v~lmv~d~~--~~i~~~~~agad~v~vH~~ 96 (228)
T 1h1y_A 22 AAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHT---KAYLDCHLMVTNPS--DYVEPLAKAGASGFTFHIE 96 (228)
T ss_dssp HHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTTC---CSEEEEEEESSCGG--GGHHHHHHHTCSEEEEEGG
T ss_pred HHHHHHHHHcCCCEEEEEEecCCcCcchhhCHHHHHHHHhhc---CCcEEEEEEecCHH--HHHHHHHHcCCCEEEECCC
Confidence 356677778899987665 6655 44555444332 22233336777663 347777776 899988422
Q ss_pred CccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHh---CccEEEecC---cccCCC
Q 012943 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVRE---GADAVMLSG---ETAHGK 413 (453)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~---G~D~vmLs~---ETA~G~ 413 (453)
. . +. ...+.++.+++.|+.++++.. ...| .|. ...+.. ++|.+++.+ -+.--+
T Consensus 97 ~--~----~~---~~~~~~~~i~~~g~~igv~~~-------p~t~--~e~---~~~~~~~~~~~d~vl~~sv~pg~~g~~ 155 (228)
T 1h1y_A 97 V--S----RD---NWQELIQSIKAKGMRPGVSLR-------PGTP--VEE---VFPLVEAENPVELVLVMTVEPGFGGQK 155 (228)
T ss_dssp G--C----TT---THHHHHHHHHHTTCEEEEEEC-------TTSC--GGG---GHHHHHSSSCCSEEEEESSCTTCSSCC
T ss_pred C--c----cc---HHHHHHHHHHHcCCCEEEEEe-------CCCC--HHH---HHHHHhcCCCCCEEEEEeecCCCCccc
Confidence 1 0 11 114667777889999998631 1122 121 134455 899998732 122235
Q ss_pred CHHHHHHHHHHHHHHH
Q 012943 414 FPLKAVKVMHTVALRT 429 (453)
Q Consensus 414 yP~eaV~~m~~I~~~a 429 (453)
|+.+.++.++++....
T Consensus 156 ~~~~~l~~i~~~~~~~ 171 (228)
T 1h1y_A 156 FMPEMMEKVRALRKKY 171 (228)
T ss_dssp CCGGGHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHhc
Confidence 6656666666554433
No 77
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=85.38 E-value=7.9 Score=40.16 Aligned_cols=121 Identities=20% Similarity=0.281 Sum_probs=69.4
Q ss_pred hHHHHHhhhhcCCcEEEecccc--CHHHHHHHHHHHHhcCCCceEEEE-ecChhhhccHHHHHhh-cCEEEEeCCCccc-
Q 012943 269 DWEDIKFGVDNQVDFYAVSFVK--DAKVVHELKDYLKSCNADIHVIVK-IESADSIPNLHSIISA-SDGAMVARGDLGA- 343 (453)
Q Consensus 269 D~~DI~~a~~~gvd~I~lSfV~--sa~dv~~v~~~L~~~~~~i~IIak-IET~~gv~NldeI~~~-sDgImIgRGDLg~- 343 (453)
..+.+.++++.|+|.|.+.+.. ....+..++. +.+.-.+.+|+++ +-|.+.. ..+.+. +|+|.++-+-=+.
T Consensus 238 ~~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~-i~~~~p~~pvi~g~~~t~e~a---~~l~~~G~d~I~v~~~~G~~~ 313 (494)
T 1vrd_A 238 TMERVEKLVKAGVDVIVIDTAHGHSRRVIETLEM-IKADYPDLPVVAGNVATPEGT---EALIKAGADAVKVGVGPGSIC 313 (494)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHH-HHHHCTTSCEEEEEECSHHHH---HHHHHTTCSEEEECSSCSTTC
T ss_pred HHHHHHHHHHhCCCEEEEEecCCchHHHHHHHHH-HHHHCCCceEEeCCcCCHHHH---HHHHHcCCCEEEEcCCCCccc
Confidence 3567788889999999885542 2222333333 3332224566543 4444433 333333 8999995431010
Q ss_pred ------cCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEec
Q 012943 344 ------ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (453)
Q Consensus 344 ------elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (453)
..|.+. ..+...+...++..+.|+|.+ .+.-+ ..|+..++..|+|+|++.
T Consensus 314 ~~~~~~~~g~p~-~~~l~~v~~~~~~~~ipvia~---------GGI~~---~~di~kala~GAd~V~iG 369 (494)
T 1vrd_A 314 TTRVVAGVGVPQ-LTAVMECSEVARKYDVPIIAD---------GGIRY---SGDIVKALAAGAESVMVG 369 (494)
T ss_dssp HHHHHHCCCCCH-HHHHHHHHHHHHTTTCCEEEE---------SCCCS---HHHHHHHHHTTCSEEEES
T ss_pred cccccCCCCccH-HHHHHHHHHHHhhcCCCEEEE---------CCcCC---HHHHHHHHHcCCCEEEEC
Confidence 112222 334455666666678999875 33333 467889999999999964
No 78
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=85.14 E-value=12 Score=36.59 Aligned_cols=112 Identities=13% Similarity=0.154 Sum_probs=63.5
Q ss_pred HHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHh-hcCEEEE-eCCCccccCCCC
Q 012943 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIIS-ASDGAMV-ARGDLGAELPIE 348 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~-~sDgImI-gRGDLg~elg~e 348 (453)
+.++.+.+.|+|+|.+++-...+.+ +.+.+. .++++.++-|.+-.. .... -+|++.+ |+ .-+-..|..
T Consensus 87 ~~~~~~~~~g~d~V~~~~g~p~~~~----~~l~~~--gi~vi~~v~t~~~a~---~~~~~GaD~i~v~g~-~~GG~~G~~ 156 (328)
T 2gjl_A 87 EYRAAIIEAGIRVVETAGNDPGEHI----AEFRRH--GVKVIHKCTAVRHAL---KAERLGVDAVSIDGF-ECAGHPGED 156 (328)
T ss_dssp HHHHHHHHTTCCEEEEEESCCHHHH----HHHHHT--TCEEEEEESSHHHHH---HHHHTTCSEEEEECT-TCSBCCCSS
T ss_pred HHHHHHHhcCCCEEEEcCCCcHHHH----HHHHHc--CCCEEeeCCCHHHHH---HHHHcCCCEEEEECC-CCCcCCCCc
Confidence 4566677889999998875443333 334443 578888887654332 2222 3899998 43 112121211
Q ss_pred CHHHHHHHHHHHHH-HcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEec
Q 012943 349 DVPLLQEDIIRRCR-SMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (453)
Q Consensus 349 ~v~~aqk~Ii~~c~-~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (453)
..+.. ..+...+ ..++|++.+ .+.-+ ..|+..++..|+|+|++.
T Consensus 157 ~~~~~--~~l~~v~~~~~iPviaa---------GGI~~---~~~v~~al~~GAdgV~vG 201 (328)
T 2gjl_A 157 DIPGL--VLLPAAANRLRVPIIAS---------GGFAD---GRGLVAALALGADAINMG 201 (328)
T ss_dssp CCCHH--HHHHHHHTTCCSCEEEE---------SSCCS---HHHHHHHHHHTCSEEEES
T ss_pred cccHH--HHHHHHHHhcCCCEEEE---------CCCCC---HHHHHHHHHcCCCEEEEC
Confidence 01111 2222222 347899886 33333 235667778899999985
No 79
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=84.81 E-value=12 Score=34.05 Aligned_cols=131 Identities=11% Similarity=0.033 Sum_probs=72.0
Q ss_pred HhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHh-hcCEEEEeCCCccccC-CCCCHH
Q 012943 274 KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIIS-ASDGAMVARGDLGAEL-PIEDVP 351 (453)
Q Consensus 274 ~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~-~sDgImIgRGDLg~el-g~e~v~ 351 (453)
+.+.+.|+|+|-+..- ...+..+++.. . ...+.+-+.|.+-+ .+... -+|.|++++.--+... |.. +
T Consensus 82 ~~a~~~gad~v~l~~~--~~~~~~~~~~~---~-~~~ig~sv~t~~~~---~~a~~~gaD~i~~~~~f~~~~~~g~~--~ 150 (221)
T 1yad_A 82 DIALFSTIHRVQLPSG--SFSPKQIRARF---P-HLHIGRSVHSLEEA---VQAEKEDADYVLFGHVFETDCKKGLE--G 150 (221)
T ss_dssp HHHHTTTCCEEEECTT--SCCHHHHHHHC---T-TCEEEEEECSHHHH---HHHHHTTCSEEEEECCC------------
T ss_pred HHHHHcCCCEEEeCCC--ccCHHHHHHHC---C-CCEEEEEcCCHHHH---HHHHhCCCCEEEECCccccCCCCCCC--C
Confidence 4456789999988743 22344444433 1 44455555554332 22222 2799999873111111 100 1
Q ss_pred HHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccCCCCHHHHHHHHHHHHHH
Q 012943 352 LLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALR 428 (453)
Q Consensus 352 ~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~ 428 (453)
.--..+-+.+...+.|++.+ .+. +.. ++..++..|+|++.+.+.--..+.|.++++.+.+.+.+
T Consensus 151 ~~~~~l~~~~~~~~~pvia~---------GGI-~~~---nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~~~~ 214 (221)
T 1yad_A 151 RGVSLLSDIKQRISIPVIAI---------GGM-TPD---RLRDVKQAGADGIAVMSGIFSSAEPLEAARRYSRKLKE 214 (221)
T ss_dssp CHHHHHHHHHHHCCSCEEEE---------SSC-CGG---GHHHHHHTTCSEEEESHHHHTSSSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCCCEEEE---------CCC-CHH---HHHHHHHcCCCEEEEhHHhhCCCCHHHHHHHHHHHHHH
Confidence 11122323344458898875 334 433 34566678999999876655556689999988877654
No 80
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=84.72 E-value=14 Score=37.37 Aligned_cols=119 Identities=21% Similarity=0.293 Sum_probs=67.9
Q ss_pred hHHHHHhhhhcCCcEEEe--ccccCHHHHHHHHHHHHhcCCCceEEE-EecChhhhccHHHHHhh-cCEEEEeCCCccc-
Q 012943 269 DWEDIKFGVDNQVDFYAV--SFVKDAKVVHELKDYLKSCNADIHVIV-KIESADSIPNLHSIISA-SDGAMVARGDLGA- 343 (453)
Q Consensus 269 D~~DI~~a~~~gvd~I~l--SfV~sa~dv~~v~~~L~~~~~~i~IIa-kIET~~gv~NldeI~~~-sDgImIgRGDLg~- 343 (453)
+.+.++.+++.|+|+|.+ ++- +++.+.++-+.+.+.-.+++|++ .+-|.+-. ....+. +|+|.++.+ -+.
T Consensus 154 ~~~~a~~~~~~G~d~i~i~~~~g-~~~~~~e~i~~ir~~~~~~pviv~~v~~~~~a---~~a~~~Gad~I~vg~~-~G~~ 228 (404)
T 1eep_A 154 TIERVEELVKAHVDILVIDSAHG-HSTRIIELIKKIKTKYPNLDLIAGNIVTKEAA---LDLISVGADCLKVGIG-PGSI 228 (404)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCC-SSHHHHHHHHHHHHHCTTCEEEEEEECSHHHH---HHHHTTTCSEEEECSS-CSTT
T ss_pred HHHHHHHHHHCCCCEEEEeCCCC-ChHHHHHHHHHHHHHCCCCeEEEcCCCcHHHH---HHHHhcCCCEEEECCC-CCcC
Confidence 455666778899999987 432 33333333334443322567775 45554332 223333 899999521 110
Q ss_pred -------cCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEe
Q 012943 344 -------ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVML 405 (453)
Q Consensus 344 -------elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmL 405 (453)
..|.+. ......+.+.+...+.|+|.+ .+.-+ ..|+..++..|+|+|++
T Consensus 229 ~~~~~~~~~g~p~-~~~l~~v~~~~~~~~ipVia~---------GGI~~---~~d~~~ala~GAd~V~i 284 (404)
T 1eep_A 229 CTTRIVAGVGVPQ-ITAICDVYEACNNTNICIIAD---------GGIRF---SGDVVKAIAAGADSVMI 284 (404)
T ss_dssp SHHHHHHCCCCCH-HHHHHHHHHHHTTSSCEEEEE---------SCCCS---HHHHHHHHHHTCSEEEE
T ss_pred cCccccCCCCcch-HHHHHHHHHHHhhcCceEEEE---------CCCCC---HHHHHHHHHcCCCHHhh
Confidence 112222 233445555555568888874 33333 45788999999999998
No 81
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=84.60 E-value=12 Score=34.77 Aligned_cols=104 Identities=16% Similarity=0.157 Sum_probs=65.5
Q ss_pred HHHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh-cCEEEEeCCCccccCCCC
Q 012943 270 WEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIE 348 (453)
Q Consensus 270 ~~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~-sDgImIgRGDLg~elg~e 348 (453)
.+.++.+++.|++.|-+.+ +++...+.+++.-.+.. ++.+-+- |.---+.++.-+++ +|++..+-.|
T Consensus 31 ~~~~~al~~gGv~~iel~~-k~~~~~~~i~~l~~~~~-~~~vgag--tvi~~d~~~~A~~aGAd~v~~p~~d-------- 98 (214)
T 1wbh_A 31 VPMAKALVAGGVRVLNVTL-RTECAVDAIRAIAKEVP-EAIVGAG--TVLNPQQLAEVTEAGAQFAISPGLT-------- 98 (214)
T ss_dssp HHHHHHHHHTTCCEEEEES-CSTTHHHHHHHHHHHCT-TSEEEEE--SCCSHHHHHHHHHHTCSCEEESSCC--------
T ss_pred HHHHHHHHHcCCCEEEEeC-CChhHHHHHHHHHHHCc-CCEEeeC--EEEEHHHHHHHHHcCCCEEEcCCCC--------
Confidence 3555777899999999986 45555555554444432 4444442 21112444444444 8999876333
Q ss_pred CHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEe
Q 012943 349 DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVML 405 (453)
Q Consensus 349 ~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmL 405 (453)
..+++.|+..|.+.+.-+ -| .+++..+...|+|.+.+
T Consensus 99 ------~~v~~~~~~~g~~~i~G~-----------~t---~~e~~~A~~~Gad~v~~ 135 (214)
T 1wbh_A 99 ------EPLLKAATEGTIPLIPGI-----------ST---VSELMLGMDYGLKEFKF 135 (214)
T ss_dssp ------HHHHHHHHHSSSCEEEEE-----------SS---HHHHHHHHHTTCCEEEE
T ss_pred ------HHHHHHHHHhCCCEEEec-----------CC---HHHHHHHHHCCCCEEEE
Confidence 368889999999987631 22 33456888999999999
No 82
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=84.36 E-value=18 Score=35.32 Aligned_cols=118 Identities=17% Similarity=0.226 Sum_probs=61.3
Q ss_pred hcCCcEEEeccc--c--------CH----HHHHHHHHHHHhc----CCCceEEEEecChhhhccHHHHHhh-----cCEE
Q 012943 278 DNQVDFYAVSFV--K--------DA----KVVHELKDYLKSC----NADIHVIVKIESADSIPNLHSIISA-----SDGA 334 (453)
Q Consensus 278 ~~gvd~I~lSfV--~--------sa----~dv~~v~~~L~~~----~~~i~IIakIET~~gv~NldeI~~~-----sDgI 334 (453)
..|+|+|-+.|- . ++ +.+..+++...+. +.+.+|++||=.--..+++.++++. +|+|
T Consensus 163 ~~g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i 242 (336)
T 1f76_A 163 YAYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGV 242 (336)
T ss_dssp GGGCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSCCCHHHHHHHHHHHHHTTCSEE
T ss_pred hccCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCCCCHHHHHHHHHHHHHcCCcEE
Confidence 348999877652 1 11 2333344443221 4578899997422111233333332 6999
Q ss_pred EEeCC-----Ccc-----ccCC-C--CCHHHHHHHHHHHHHH-c--CCCEEEEechhhhhccCCCCchHHHHHHHHHHHh
Q 012943 335 MVARG-----DLG-----AELP-I--EDVPLLQEDIIRRCRS-M--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVRE 398 (453)
Q Consensus 335 mIgRG-----DLg-----~elg-~--e~v~~aqk~Ii~~c~~-a--Gkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~ 398 (453)
.+.-+ |+. .+.| + +.+....-..+...++ . +.|+|.. .+.-+ ..|+..++..
T Consensus 243 ~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~---------GGI~~---~~da~~~l~~ 310 (336)
T 1f76_A 243 IATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGV---------GGIDS---VIAAREKIAA 310 (336)
T ss_dssp EECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEE---------SSCCS---HHHHHHHHHH
T ss_pred EEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEE---------CCCCC---HHHHHHHHHC
Confidence 87532 220 0111 1 1112222233333333 3 6888874 33434 4567788889
Q ss_pred CccEEEecC
Q 012943 399 GADAVMLSG 407 (453)
Q Consensus 399 G~D~vmLs~ 407 (453)
|+|+|++..
T Consensus 311 GAd~V~igr 319 (336)
T 1f76_A 311 GASLVQIYS 319 (336)
T ss_dssp TCSEEEESH
T ss_pred CCCEEEeeH
Confidence 999999963
No 83
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=84.28 E-value=16 Score=35.74 Aligned_cols=156 Identities=8% Similarity=0.084 Sum_probs=92.1
Q ss_pred CCCHhhHHHH-HhhhhcCCcEEEeccccCH------HHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh-cC--E
Q 012943 264 SITDKDWEDI-KFGVDNQVDFYAVSFVKDA------KVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SD--G 333 (453)
Q Consensus 264 ~ltekD~~DI-~~a~~~gvd~I~lSfV~sa------~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~-sD--g 333 (453)
.++..++..| +...+.|++.|=+.|-.++ .|..++...+.+. .++.+.+.+.+..+ ++..++. .| .
T Consensus 24 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~-~~~~~~~l~~~~~~---i~~a~~~g~~~v~ 99 (307)
T 1ydo_A 24 WIATEDKITWINQLSRTGLSYIEITSFVHPKWIPALRDAIDVAKGIDRE-KGVTYAALVPNQRG---LENALEGGINEAC 99 (307)
T ss_dssp CCCHHHHHHHHHHHHTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC-TTCEEEEECCSHHH---HHHHHHHTCSEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCcCcccccccCCHHHHHHHhhhc-CCCeEEEEeCCHHh---HHHHHhCCcCEEE
Confidence 4577777655 4456789999877542222 2433443444332 45566665544443 3333333 56 4
Q ss_pred EEEeCCCccc----cCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhcc-CC---CCchHHHHHHHH-HHHhCccEEE
Q 012943 334 AMVARGDLGA----ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMID-HP---TPTRAEVSDIAI-AVREGADAVM 404 (453)
Q Consensus 334 ImIgRGDLg~----elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~-~~---~PtrAEv~Dv~n-av~~G~D~vm 404 (453)
++++-.|+-. ....++.......+++.++++|+.|-.. + +|.. .+ .-+...+.+++. +...|+|.+.
T Consensus 100 i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~--i--~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~ 175 (307)
T 1ydo_A 100 VFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAY--L--STVFGCPYEKDVPIEQVIRLSEALFEFGISELS 175 (307)
T ss_dssp EEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEE--E--ECTTCBTTTBCCCHHHHHHHHHHHHHHTCSCEE
T ss_pred EEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEE--E--EEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 5555555421 1223456667788999999999997532 0 1111 11 223344555554 4578999999
Q ss_pred ecCcccCCCCHHHHHHHHHHHHHH
Q 012943 405 LSGETAHGKFPLKAVKVMHTVALR 428 (453)
Q Consensus 405 Ls~ETA~G~yP~eaV~~m~~I~~~ 428 (453)
|. +|.=...|.+.-++++.+..+
T Consensus 176 l~-DT~G~~~P~~v~~lv~~l~~~ 198 (307)
T 1ydo_A 176 LG-DTIGAANPAQVETVLEALLAR 198 (307)
T ss_dssp EE-CSSCCCCHHHHHHHHHHHHTT
T ss_pred Ec-CCCCCcCHHHHHHHHHHHHHh
Confidence 96 888788999988888887653
No 84
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=83.93 E-value=8.3 Score=37.54 Aligned_cols=157 Identities=13% Similarity=0.081 Sum_probs=89.9
Q ss_pred CCCHhhHHHH-HhhhhcCCcEEEeccccCH------HHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh-cCEEE
Q 012943 264 SITDKDWEDI-KFGVDNQVDFYAVSFVKDA------KVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAM 335 (453)
Q Consensus 264 ~ltekD~~DI-~~a~~~gvd~I~lSfV~sa------~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~-sDgIm 335 (453)
.++..++..| +...+.|++.|-+.|-.++ .|..++...+.+ ..++.+.+.+.+.+. ++..++. .|.|+
T Consensus 26 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~~~~~d~~~~~~~~~~-~~~~~~~~l~~~~~~---i~~a~~aG~~~v~ 101 (302)
T 2ftp_A 26 PIEVADKIRLVDDLSAAGLDYIEVGSFVSPKWVPQMAGSAEVFAGIRQ-RPGVTYAALAPNLKG---FEAALESGVKEVA 101 (302)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCC-CTTSEEEEECCSHHH---HHHHHHTTCCEEE
T ss_pred CCCHHHHHHHHHHHHHcCcCEEEECCCcCccccccccCHHHHHHHhhh-cCCCEEEEEeCCHHH---HHHHHhCCcCEEE
Confidence 3566777555 5556789999877542222 233333333332 245666666643332 3333333 67766
Q ss_pred E--eCCCc----cccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCC---CCchHHHHHHHH-HHHhCccEEEe
Q 012943 336 V--ARGDL----GAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHP---TPTRAEVSDIAI-AVREGADAVML 405 (453)
Q Consensus 336 I--gRGDL----g~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~---~PtrAEv~Dv~n-av~~G~D~vmL 405 (453)
+ +-.|+ -..++.++.....+++++.|+++|+.|-.. |......+ .-+..++.+++. +...|+|.+.|
T Consensus 102 i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~---l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l 178 (302)
T 2ftp_A 102 VFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGY---ISCVLGCPYDGDVDPRQVAWVARELQQMGCYEVSL 178 (302)
T ss_dssp EEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEE---EECTTCBTTTBCCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred EEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEE---EEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 5 32342 112455667777789999999999997421 00000111 122334445443 44789999999
Q ss_pred cCcccCCCCHHHHHHHHHHHHHH
Q 012943 406 SGETAHGKFPLKAVKVMHTVALR 428 (453)
Q Consensus 406 s~ETA~G~yP~eaV~~m~~I~~~ 428 (453)
. +|.=...|-+.-+.++.|..+
T Consensus 179 ~-DT~G~~~P~~~~~lv~~l~~~ 200 (302)
T 2ftp_A 179 G-DTIGVGTAGATRRLIEAVASE 200 (302)
T ss_dssp E-ESSSCCCHHHHHHHHHHHTTT
T ss_pred e-CCCCCcCHHHHHHHHHHHHHh
Confidence 8 666557898888888888653
No 85
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=83.56 E-value=10 Score=34.86 Aligned_cols=103 Identities=12% Similarity=0.092 Sum_probs=62.9
Q ss_pred HHHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh-cCEEEEeCCCccccCCCC
Q 012943 270 WEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIE 348 (453)
Q Consensus 270 ~~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~-sDgImIgRGDLg~elg~e 348 (453)
.+-++.+++.|++.|-+.+ +++.....++. +.+ .+..+-+- |.---+.++.-+++ +|++..+..|.
T Consensus 28 ~~~~~~l~~gGv~~iel~~-k~~~~~~~i~~-~~~--~~~~~gag--~vl~~d~~~~A~~~GAd~v~~~~~d~------- 94 (207)
T 2yw3_A 28 LGLARVLEEEGVGALEITL-RTEKGLEALKA-LRK--SGLLLGAG--TVRSPKEAEAALEAGAAFLVSPGLLE------- 94 (207)
T ss_dssp HHHHHHHHHTTCCEEEEEC-SSTHHHHHHHH-HTT--SSCEEEEE--SCCSHHHHHHHHHHTCSEEEESSCCH-------
T ss_pred HHHHHHHHHcCCCEEEEeC-CChHHHHHHHH-HhC--CCCEEEeC--eEeeHHHHHHHHHcCCCEEEcCCCCH-------
Confidence 3455677888999999986 45555444443 333 34444333 22112444444434 78987653222
Q ss_pred CHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEec
Q 012943 349 DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (453)
Q Consensus 349 ~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (453)
.+++.|+..|.+.+.-+ .| .+++..+...|+|.+.+-
T Consensus 95 -------~v~~~~~~~g~~~i~G~-----------~t---~~e~~~A~~~Gad~v~~f 131 (207)
T 2yw3_A 95 -------EVAALAQARGVPYLPGV-----------LT---PTEVERALALGLSALKFF 131 (207)
T ss_dssp -------HHHHHHHHHTCCEEEEE-----------CS---HHHHHHHHHTTCCEEEET
T ss_pred -------HHHHHHHHhCCCEEecC-----------CC---HHHHHHHHHCCCCEEEEe
Confidence 67788999999987631 23 334567888999999883
No 86
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=83.20 E-value=1.9 Score=40.89 Aligned_cols=147 Identities=14% Similarity=0.030 Sum_probs=87.0
Q ss_pred CCCCCHhhHHHH-HhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHH------Hhh-cCE
Q 012943 262 LPSITDKDWEDI-KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSI------ISA-SDG 333 (453)
Q Consensus 262 lp~ltekD~~DI-~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI------~~~-sDg 333 (453)
-|..|..|.+.+ +.+.++|++.|+++ +..+..++++|. + ++|.+-|==|.|-.+.+.. ++. +|.
T Consensus 11 ~p~~t~~~i~~l~~~A~~~~~~aVcv~----p~~v~~a~~~l~--g--v~v~tvigFP~G~~~~~~k~~E~~~i~~GAdE 82 (226)
T 1vcv_A 11 KPYLTVDEAVAGARKAEELGVAAYCVN----PIYAPVVRPLLR--K--VKLCVVADFPFGALPTASRIALVSRLAEVADE 82 (226)
T ss_dssp CTTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHGGGCS--S--SEEEEEESTTTCCSCHHHHHHHHHHHTTTCSE
T ss_pred CCCCCHHHHHHHHHHHHHhCCCEEEEC----HHHHHHHHHHhC--C--CeEEEEeCCCCCCCchHHHHHHHHHHHCCCCE
Confidence 366788887555 77888999999875 455666666653 2 7777777444443333322 222 443
Q ss_pred EEEeCCCccccCC------CCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHH-HHHhCccEEEec
Q 012943 334 AMVARGDLGAELP------IEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI-AVREGADAVMLS 406 (453)
Q Consensus 334 ImIgRGDLg~elg------~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~n-av~~G~D~vmLs 406 (453)
|-+ .+.+| ++.+..-.+.+.++|...+.+||+.|-.| |..|+...+. +...|+|.|=-|
T Consensus 83 ID~-----Vinig~~~~g~~~~v~~ei~~v~~a~~~~~lKvIlEt~~L---------t~eei~~a~~ia~eaGADfVKTS 148 (226)
T 1vcv_A 83 IDV-----VAPIGLVKSRRWAEVRRDLISVVGAAGGRVVKVITEEPYL---------RDEERYTLYDIIAEAGAHFIKSS 148 (226)
T ss_dssp EEE-----ECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGC---------CHHHHHHHHHHHHHHTCSEEECC
T ss_pred EEE-----ecchhhhcCCCHHHHHHHHHHHHHHHcCCCceEEEeccCC---------CHHHHHHHHHHHHHcCCCEEEeC
Confidence 322 12222 12344445666666665567788866555 5566555443 456899998776
Q ss_pred Cccc----------CCCCHHHHHHHHHHHHHHHh
Q 012943 407 GETA----------HGKFPLKAVKVMHTVALRTE 430 (453)
Q Consensus 407 ~ETA----------~G~yP~eaV~~m~~I~~~aE 430 (453)
.-=. .|.=-++.|+.|++.++++-
T Consensus 149 TGf~~~~~~~~~~~~~gAt~~dv~lm~~~i~~~g 182 (226)
T 1vcv_A 149 TGFAEEAYAARQGNPVHSTPERAAAIARYIKEKG 182 (226)
T ss_dssp CSCCCHHHHHHTTCCSSCCHHHHHHHHHHHHHHT
T ss_pred CCCCccccccccCCCCCCCHHHHHHHHHHHHHhC
Confidence 2211 12223689999999977654
No 87
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=82.90 E-value=16 Score=35.33 Aligned_cols=129 Identities=12% Similarity=0.144 Sum_probs=77.2
Q ss_pred HHHhhhhcCCcEEEecc-ccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh----cCEEEEeCCCccccCC
Q 012943 272 DIKFGVDNQVDFYAVSF-VKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA----SDGAMVARGDLGAELP 346 (453)
Q Consensus 272 DI~~a~~~gvd~I~lSf-V~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~----sDgImIgRGDLg~elg 346 (453)
.+..+...|+|.|.+-- .-+.+++.++.++..+.| +.+++-+- |.+|+..+ +|.|-+..-||.. ++
T Consensus 134 qi~ea~~~GAD~VlLi~a~L~~~~l~~l~~~a~~lG--l~~lvevh------~~eEl~~A~~~ga~iIGinnr~l~t-~~ 204 (272)
T 3tsm_A 134 QVYEARSWGADCILIIMASVDDDLAKELEDTAFALG--MDALIEVH------DEAEMERALKLSSRLLGVNNRNLRS-FE 204 (272)
T ss_dssp HHHHHHHTTCSEEEEETTTSCHHHHHHHHHHHHHTT--CEEEEEEC------SHHHHHHHTTSCCSEEEEECBCTTT-CC
T ss_pred HHHHHHHcCCCEEEEcccccCHHHHHHHHHHHHHcC--CeEEEEeC------CHHHHHHHHhcCCCEEEECCCCCcc-CC
Confidence 46667789999987753 234556666666666553 44555443 44555433 6777777666632 12
Q ss_pred CCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccCCCCHHHHHHHHHH
Q 012943 347 IEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHT 424 (453)
Q Consensus 347 ~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~ 424 (453)
. .+.. -.+++... ..++|++. .++.-|.+ |+..+...|+|+++...---....|.++++-|..
T Consensus 205 ~-dl~~-~~~L~~~i-p~~~~vIa---------esGI~t~e---dv~~l~~~Ga~gvLVG~almr~~d~~~~~~~l~~ 267 (272)
T 3tsm_A 205 V-NLAV-SERLAKMA-PSDRLLVG---------ESGIFTHE---DCLRLEKSGIGTFLIGESLMRQHDVAAATRALLT 267 (272)
T ss_dssp B-CTHH-HHHHHHHS-CTTSEEEE---------ESSCCSHH---HHHHHHTTTCCEEEECHHHHTSSCHHHHHHHHHH
T ss_pred C-ChHH-HHHHHHhC-CCCCcEEE---------ECCCCCHH---HHHHHHHcCCCEEEEcHHHcCCcCHHHHHHHHHh
Confidence 1 1111 12222222 12566655 56666654 5667788999999986555577889988887653
No 88
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=82.46 E-value=11 Score=36.60 Aligned_cols=161 Identities=12% Similarity=0.047 Sum_probs=91.2
Q ss_pred CCCHhhHHHH-HhhhhcCCcEEEecc-ccC-----HHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh-cCE--
Q 012943 264 SITDKDWEDI-KFGVDNQVDFYAVSF-VKD-----AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDG-- 333 (453)
Q Consensus 264 ~ltekD~~DI-~~a~~~gvd~I~lSf-V~s-----a~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~-sDg-- 333 (453)
.++..++..| +...+.|+|.|=+.+ +.. ..|..++...+.+. .++.+.+.+.+.++ ++..++. .|.
T Consensus 23 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~-~~~~~~~l~~~~~~---i~~a~~ag~~~v~ 98 (298)
T 2cw6_A 23 IVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQKF-PGINYPVLTPNLKG---FEAAVAAGAKEVV 98 (298)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEECCEECCCTTTCGGGTTHHHHHHHSCCC-TTCBCCEECCSHHH---HHHHHHTTCSEEE
T ss_pred CCCHHHHHHHHHHHHHcCcCEEEECCCcCcccccccCCHHHHHHHHhhC-CCCEEEEEcCCHHh---HHHHHHCCCCEEE
Confidence 3566776554 555678999987754 221 13444444445432 23333344444333 3333333 564
Q ss_pred EEEeCCCcc----ccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHH-HHHhCccEEEecCc
Q 012943 334 AMVARGDLG----AELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI-AVREGADAVMLSGE 408 (453)
Q Consensus 334 ImIgRGDLg----~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~n-av~~G~D~vmLs~E 408 (453)
++++-.|.- .....++......++++.|+++|++|-+..-+-=+-.....-+..++.+++. +...|+|.+.|. +
T Consensus 99 i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~-D 177 (298)
T 2cw6_A 99 IFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLG-D 177 (298)
T ss_dssp EEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHHHHHHHHHTTCSEEEEE-E
T ss_pred EEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEec-C
Confidence 444444431 1123345666678889999999999864311100000111223344555543 456899999996 7
Q ss_pred ccCCCCHHHHHHHHHHHHHHH
Q 012943 409 TAHGKFPLKAVKVMHTVALRT 429 (453)
Q Consensus 409 TA~G~yP~eaV~~m~~I~~~a 429 (453)
|.=...|.+.-++++.+..+.
T Consensus 178 T~G~~~P~~~~~lv~~l~~~~ 198 (298)
T 2cw6_A 178 TIGVGTPGIMKDMLSAVMQEV 198 (298)
T ss_dssp TTSCCCHHHHHHHHHHHHHHS
T ss_pred CCCCcCHHHHHHHHHHHHHhC
Confidence 887788999999988887654
No 89
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=82.17 E-value=4.4 Score=39.31 Aligned_cols=142 Identities=15% Similarity=0.153 Sum_probs=85.1
Q ss_pred CCCCHhhHHHH-HhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh--------cCE
Q 012943 263 PSITDKDWEDI-KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA--------SDG 333 (453)
Q Consensus 263 p~ltekD~~DI-~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~--------sDg 333 (453)
|..|..|.+.+ +.+.+.|+..|+++ +..+..+++.|. +..+.|.+-|=-|.|-...+.-+.. +|.
T Consensus 54 p~~t~~~I~~lc~eA~~~~~aaVCV~----p~~V~~a~~~L~--gs~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdE 127 (260)
T 3r12_A 54 PFATPDDIKKLCLEARENRFHGVCVN----PCYVKLAREELE--GTDVKVVTVVGFPLGANETRTKAHEAIFAVESGADE 127 (260)
T ss_dssp TTCCHHHHHHHHHHHHHTTCSEEEEC----GGGHHHHHHHHT--TSCCEEEEEESTTTCCSCHHHHHHHHHHHHHHTCSE
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEC----HHHHHHHHHHhc--CCCCeEEEEecCCCCCCcHHHHHHHHHHHHHcCCCE
Confidence 56788888665 67889999999885 567777888883 5568888888777766554443322 343
Q ss_pred EEEeCCCccccCCC---CCHHHHH---HHHHHHHHHcCCC--EEEEechhhhhccCCCCchHHHHHHHH-HHHhCccEEE
Q 012943 334 AMVARGDLGAELPI---EDVPLLQ---EDIIRRCRSMQKP--VIVATNMLESMIDHPTPTRAEVSDIAI-AVREGADAVM 404 (453)
Q Consensus 334 ImIgRGDLg~elg~---e~v~~aq---k~Ii~~c~~aGkp--vi~aTqmLeSM~~~~~PtrAEv~Dv~n-av~~G~D~vm 404 (453)
|=+ -+.+|. .+..... +.+.++|. |+| ||+-|- .-|..|+..... +...|+|.|=
T Consensus 128 IDm-----ViNig~lk~g~~~~v~~eI~~v~~a~~--~~~lKVIlEt~---------~Lt~eei~~A~~ia~eaGADfVK 191 (260)
T 3r12_A 128 IDM-----VINVGMLKAKEWEYVYEDIRSVVESVK--GKVVKVIIETC---------YLDTEEKIAACVISKLAGAHFVK 191 (260)
T ss_dssp EEE-----ECCHHHHHTTCHHHHHHHHHHHHHHTT--TSEEEEECCGG---------GCCHHHHHHHHHHHHHTTCSEEE
T ss_pred EEE-----EeehhhhccccHHHHHHHHHHHHHhcC--CCcEEEEEeCC---------CCCHHHHHHHHHHHHHhCcCEEE
Confidence 321 122222 1333333 44444443 444 344332 335667665544 4567999998
Q ss_pred ecCcccCCCCHHHHHHHHHHHH
Q 012943 405 LSGETAHGKFPLKAVKVMHTVA 426 (453)
Q Consensus 405 Ls~ETA~G~yP~eaV~~m~~I~ 426 (453)
-|.-=..|-=-++.|+.|++.+
T Consensus 192 TSTGf~~~GAT~edV~lm~~~v 213 (260)
T 3r12_A 192 TSTGFGTGGATAEDVHLMKWIV 213 (260)
T ss_dssp CCCSSSSCCCCHHHHHHHHHHH
T ss_pred cCCCCCCCCCCHHHHHHHHHHh
Confidence 7732122223468999999875
No 90
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=81.93 E-value=6.4 Score=38.10 Aligned_cols=92 Identities=17% Similarity=0.290 Sum_probs=54.8
Q ss_pred hHHHHHhhhhcCCcEE--Eecc---------ccCHH-----------HHHHHHHHHHhcCCCceEEEEec-Ch---hhhc
Q 012943 269 DWEDIKFGVDNQVDFY--AVSF---------VKDAK-----------VVHELKDYLKSCNADIHVIVKIE-SA---DSIP 322 (453)
Q Consensus 269 D~~DI~~a~~~gvd~I--~lSf---------V~sa~-----------dv~~v~~~L~~~~~~i~IIakIE-T~---~gv~ 322 (453)
-.+.++...+.|+|+| ++|| ++.+. ++.++-+.+++.+.+++++.+.- ++ -|++
T Consensus 34 ~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e 113 (267)
T 3vnd_A 34 SLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLYANLVFANGID 113 (267)
T ss_dssp HHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEECHHHHHHHCHH
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHhhHH
Confidence 3466666677899985 5566 33322 22222222333335677887754 43 3556
Q ss_pred cHHHHHhh--cCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEE
Q 012943 323 NLHSIISA--SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIV 370 (453)
Q Consensus 323 NldeI~~~--sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~ 370 (453)
++-+-++. +||+++. || ++++ ..+....|+++|...+.
T Consensus 114 ~f~~~~~~aGvdgvii~--Dl----p~ee----~~~~~~~~~~~gl~~i~ 153 (267)
T 3vnd_A 114 EFYTKAQAAGVDSVLIA--DV----PVEE----SAPFSKAAKAHGIAPIF 153 (267)
T ss_dssp HHHHHHHHHTCCEEEET--TS----CGGG----CHHHHHHHHHTTCEEEC
T ss_pred HHHHHHHHcCCCEEEeC--CC----CHhh----HHHHHHHHHHcCCeEEE
Confidence 55444433 7999993 55 4444 46788889999987653
No 91
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=81.82 E-value=5.5 Score=37.91 Aligned_cols=141 Identities=16% Similarity=0.094 Sum_probs=86.5
Q ss_pred CCCCHhhHHHH-HhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHh-------h-cCE
Q 012943 263 PSITDKDWEDI-KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIIS-------A-SDG 333 (453)
Q Consensus 263 p~ltekD~~DI-~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~-------~-sDg 333 (453)
|.-|..|.+.+ +.+.++|++.|+++ +..+ ..++++.... .+.+.+-|==|.|-.+.+..+. . +|.
T Consensus 31 p~~t~~~i~~l~~~a~~~~~~aVcv~----p~~v-~a~~~l~~~~-~v~v~tvigFP~G~~~~~~k~~e~~~Av~~GAdE 104 (234)
T 1n7k_A 31 PRATEEDVRNLVREASDYGFRCAVLT----PVYT-VKISGLAEKL-GVKLCSVIGFPLGQAPLEVKLVEAQTVLEAGATE 104 (234)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----HHHH-HHHHHHHHHH-TCCEEEEESTTTCCSCHHHHHHHHHHHHHHTCCE
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEc----hHHh-eeehHhCCCC-CceEEEEeCCCCCCCcHHHHHHHHHHHHHcCCCE
Confidence 66688887555 67788999999875 5566 6677775431 4667776633444333332222 1 555
Q ss_pred EEE--eCCCccccCCCCCHHHHHHHHHHHHHHcCCCE--EEEechhhhhccCCCCchHHHHHHHH-HHHhCccEEEecCc
Q 012943 334 AMV--ARGDLGAELPIEDVPLLQEDIIRRCRSMQKPV--IVATNMLESMIDHPTPTRAEVSDIAI-AVREGADAVMLSGE 408 (453)
Q Consensus 334 ImI--gRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpv--i~aTqmLeSM~~~~~PtrAEv~Dv~n-av~~G~D~vmLs~E 408 (453)
|-+ -.|.|- +.+..-...+.++|...|+|+ |+-|-. ++..|+...++ +...|+|.|=-|
T Consensus 105 ID~vinig~~~-----~~v~~ei~~v~~a~~~~g~~lKvIlEt~~---------L~~e~i~~a~ria~eaGADfVKTs-- 168 (234)
T 1n7k_A 105 LDVVPHLSLGP-----EAVYREVSGIVKLAKSYGAVVKVILEAPL---------WDDKTLSLLVDSSRRAGADIVKTS-- 168 (234)
T ss_dssp EEECCCGGGCH-----HHHHHHHHHHHHHHHHTTCEEEEECCGGG---------SCHHHHHHHHHHHHHTTCSEEESC--
T ss_pred EEEeccchHHH-----HHHHHHHHHHHHHHhhcCCeEEEEEeccC---------CCHHHHHHHHHHHHHhCCCEEEeC--
Confidence 433 122221 145555678888898888886 654433 35556555443 456899998765
Q ss_pred ccCCCCH-----HHHHHH--HHHHHH
Q 012943 409 TAHGKFP-----LKAVKV--MHTVAL 427 (453)
Q Consensus 409 TA~G~yP-----~eaV~~--m~~I~~ 427 (453)
.|..| ++.|+. |++++.
T Consensus 169 --TG~~~~~gAt~~dv~l~~m~~~v~ 192 (234)
T 1n7k_A 169 --TGVYTKGGDPVTVFRLASLAKPLG 192 (234)
T ss_dssp --CSSSCCCCSHHHHHHHHHHHGGGT
T ss_pred --CCCCCCCCCCHHHHHHHHHHHHHC
Confidence 56555 788998 887653
No 92
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=81.73 E-value=24 Score=36.88 Aligned_cols=121 Identities=15% Similarity=0.122 Sum_probs=73.3
Q ss_pred HHHHHhhhhcCCcEEEeccc--cCHHHHHHHHHHHHhcCCC-ceEE-EEecChhhhccHHHHHhhcCEEEEeCCCcc---
Q 012943 270 WEDIKFGVDNQVDFYAVSFV--KDAKVVHELKDYLKSCNAD-IHVI-VKIESADSIPNLHSIISASDGAMVARGDLG--- 342 (453)
Q Consensus 270 ~~DI~~a~~~gvd~I~lSfV--~sa~dv~~v~~~L~~~~~~-i~II-akIET~~gv~NldeI~~~sDgImIgRGDLg--- 342 (453)
.+.++...+.|++.+.+..- .+...+..+ +++.+...+ +.++ ..|.|++..+.+.+ .-+|++.+|-|-=+
T Consensus 244 ~e~~~~l~e~gv~~l~Vd~~~g~~~~~~~~i-~~lk~~~~~~~~Vi~G~V~t~~~a~~l~~--aGad~I~Vg~~~g~~~~ 320 (503)
T 1me8_A 244 RERVPALVEAGADVLCIDSSDGFSEWQKITI-GWIREKYGDKVKVGAGNIVDGEGFRYLAD--AGADFIKIGIGGGSICI 320 (503)
T ss_dssp HHHHHHHHHHTCSEEEECCSCCCSHHHHHHH-HHHHHHHGGGSCEEEEEECSHHHHHHHHH--HTCSEEEECSSCSTTCC
T ss_pred HHHHHHHHhhhccceEEecccCcccchhhHH-HHHHHhCCCCceEeeccccCHHHHHHHHH--hCCCeEEecccCCcCcc
Confidence 34466667889998876321 222222222 334333223 5555 47888877765543 23899988753211
Q ss_pred ----ccCCCCCHHHHHHHHHHHHHHc------CCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEec
Q 012943 343 ----AELPIEDVPLLQEDIIRRCRSM------QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (453)
Q Consensus 343 ----~elg~e~v~~aqk~Ii~~c~~a------Gkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (453)
...|.+ -..+...+.++|++. ++|+|.+ .+.-+ -.|++.|+..|||+||+.
T Consensus 321 ~r~~~~~g~p-~~~~l~~v~~~~~~~~~~~~~~ipvia~---------GGi~~---~~di~kAlalGA~~V~iG 381 (503)
T 1me8_A 321 TREQKGIGRG-QATAVIDVVAERNKYFEETGIYIPVCSD---------GGIVY---DYHMTLALAMGADFIMLG 381 (503)
T ss_dssp STTTTCCCCC-HHHHHHHHHHHHHHHHHHHSEECCEEEE---------SCCCS---HHHHHHHHHTTCSEEEES
T ss_pred cccccCCCCc-hHHHHHHHHHHHHHHhhhcCCCceEEEe---------CCCCC---HHHHHHHHHcCCCEEEEC
Confidence 122333 334556777777777 8998875 34444 567999999999999985
No 93
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=81.29 E-value=17 Score=33.29 Aligned_cols=134 Identities=13% Similarity=0.122 Sum_probs=70.4
Q ss_pred HHHHHhhhhcCCcEEEeccccC--H--HHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh-cCEE---EEeCCCc
Q 012943 270 WEDIKFGVDNQVDFYAVSFVKD--A--KVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGA---MVARGDL 341 (453)
Q Consensus 270 ~~DI~~a~~~gvd~I~lSfV~s--a--~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~-sDgI---mIgRGDL 341 (453)
.+.++.+.+.|+|+|.+..... + ..+.++-+.+.+...+..+++.+.|.+.. ...... +|.| +.|..+=
T Consensus 91 ~~~i~~~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~~~~t~~ea---~~a~~~Gad~i~~~v~g~~~~ 167 (234)
T 1yxy_A 91 MTEVDQLAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEKYPNQLLMADISTFDEG---LVAHQAGIDFVGTTLSGYTPY 167 (234)
T ss_dssp HHHHHHHHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHHCTTCEEEEECSSHHHH---HHHHHTTCSEEECTTTTSSTT
T ss_pred HHHHHHHHHcCCCEEEEcccccCCCCCccHHHHHHHHHHhCCCCeEEEeCCCHHHH---HHHHHcCCCEEeeeccccCCC
Confidence 4556777889999998754321 2 12233333333332356677777665442 222222 7877 3332220
Q ss_pred cccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccCCCCHHHHHHH
Q 012943 342 GAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKV 421 (453)
Q Consensus 342 g~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~ 421 (453)
........+..+ +++ +.. +.|++.. .+.-|.. |+..++..|+|++++..-- .. |.++++.
T Consensus 168 ~~~~~~~~~~~i-~~~---~~~-~ipvia~---------GGI~s~~---~~~~~~~~Gad~v~vGsal-~~--p~~~~~~ 227 (234)
T 1yxy_A 168 SRQEAGPDVALI-EAL---CKA-GIAVIAE---------GKIHSPE---EAKKINDLGVAGIVVGGAI-TR--PKEIAER 227 (234)
T ss_dssp SCCSSSCCHHHH-HHH---HHT-TCCEEEE---------SCCCSHH---HHHHHHTTCCSEEEECHHH-HC--HHHHHHH
T ss_pred CcCCCCCCHHHH-HHH---HhC-CCCEEEE---------CCCCCHH---HHHHHHHCCCCEEEEchHH-hC--hHHHHHH
Confidence 000111233222 222 223 7888874 4454443 4556677799999986422 22 8888887
Q ss_pred HHHHH
Q 012943 422 MHTVA 426 (453)
Q Consensus 422 m~~I~ 426 (453)
+.+.+
T Consensus 228 l~~~~ 232 (234)
T 1yxy_A 228 FIEAL 232 (234)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 76543
No 94
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=81.05 E-value=4.7 Score=38.36 Aligned_cols=38 Identities=13% Similarity=0.314 Sum_probs=28.4
Q ss_pred HHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEec
Q 012943 355 EDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (453)
Q Consensus 355 k~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (453)
..+++.|+++|.|++-- .-| .+++..|...|+|.+-+-
T Consensus 117 ~~vi~~~~~~gi~~ipG-----------v~T---ptEi~~A~~~Gad~vK~F 154 (232)
T 4e38_A 117 PNTVRACQEIGIDIVPG-----------VNN---PSTVEAALEMGLTTLKFF 154 (232)
T ss_dssp HHHHHHHHHHTCEEECE-----------ECS---HHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHcCCCEEcC-----------CCC---HHHHHHHHHcCCCEEEEC
Confidence 57788899999997531 112 445778999999999883
No 95
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=80.97 E-value=5.9 Score=37.89 Aligned_cols=144 Identities=15% Similarity=0.136 Sum_probs=84.9
Q ss_pred CCCCCHhhHHHH-HhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh--------cC
Q 012943 262 LPSITDKDWEDI-KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA--------SD 332 (453)
Q Consensus 262 lp~ltekD~~DI-~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~--------sD 332 (453)
-|..|..|.+.+ +.+.+.|+..|+++ +..+..++++|. +..+.|.+-|==|.|-...+.-+.. +|
T Consensus 37 ~p~~t~~~i~~lc~eA~~~~~~aVcV~----p~~v~~a~~~L~--~s~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAd 110 (239)
T 3ngj_A 37 KADATEEQIRKLCSEAAEYKFASVCVN----PTWVPLCAELLK--GTGVKVCTVIGFPLGATPSEVKAYETKVAVEQGAE 110 (239)
T ss_dssp CTTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHHHHHT--TSSCEEEEEESTTTCCSCHHHHHHHHHHHHHTTCS
T ss_pred CCCCCHHHHHHHHHHHHhcCCcEEEEC----HHHHHHHHHHhC--CCCCeEEEEeccCCCCCchHHHHHHHHHHHHcCCC
Confidence 366788888665 77888999999885 567777888883 5567887777555555444332221 34
Q ss_pred EEEEeCCCccccCCC---CC---HHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHH-HHhCccEEEe
Q 012943 333 GAMVARGDLGAELPI---ED---VPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIA-VREGADAVML 405 (453)
Q Consensus 333 gImIgRGDLg~elg~---e~---v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~na-v~~G~D~vmL 405 (453)
.|=+ -+.+|. .+ +..-.+.+.++|...-.+||+-|-. -|..|+...... ...|+|.|=-
T Consensus 111 EIDm-----ViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~---------Lt~eei~~a~~ia~~aGADfVKT 176 (239)
T 3ngj_A 111 EVDM-----VINIGMVKAKKYDDVEKDVKAVVDASGKALTKVIIECCY---------LTNEEKVEVCKRCVAAGAEYVKT 176 (239)
T ss_dssp EEEE-----ECCHHHHHTTCHHHHHHHHHHHHHHHTTSEEEEECCGGG---------SCHHHHHHHHHHHHHHTCSEEEC
T ss_pred EEEE-----EeehHHhccccHHHHHHHHHHHHHHhcCCceEEEEecCC---------CCHHHHHHHHHHHHHHCcCEEEC
Confidence 3321 122221 22 3334455555554322445554433 356665555443 5679999987
Q ss_pred cCc-ccCCCCHHHHHHHHHHHH
Q 012943 406 SGE-TAHGKFPLKAVKVMHTVA 426 (453)
Q Consensus 406 s~E-TA~G~yP~eaV~~m~~I~ 426 (453)
|.- +.-|. -++.|+.|++.+
T Consensus 177 STGf~~ggA-t~~dv~lmr~~v 197 (239)
T 3ngj_A 177 STGFGTHGA-TPEDVKLMKDTV 197 (239)
T ss_dssp CCSSSSCCC-CHHHHHHHHHHH
T ss_pred CCCCCCCCC-CHHHHHHHHHhh
Confidence 733 22333 358999999876
No 96
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=80.89 E-value=29 Score=30.94 Aligned_cols=131 Identities=9% Similarity=0.004 Sum_probs=69.7
Q ss_pred HhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhhcCEEEEeCC-CccccCC-CCCHH
Q 012943 274 KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARG-DLGAELP-IEDVP 351 (453)
Q Consensus 274 ~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~sDgImIgRG-DLg~elg-~e~v~ 351 (453)
+.+.+.|+|+|-++.-. .++..++++. ....+..-+.|++-+... ...-+|.+++++. +=+..-+ ...-.
T Consensus 80 ~~a~~~gad~v~l~~~~--~~~~~~~~~~----~~~~~~v~~~t~~e~~~~--~~~g~d~i~~~~~~~~~~~~~~~~~~~ 151 (215)
T 1xi3_A 80 DVALAVDADGVQLGPED--MPIEVAKEIA----PNLIIGASVYSLEEALEA--EKKGADYLGAGSVFPTKTKEDARVIGL 151 (215)
T ss_dssp HHHHHHTCSEEEECTTS--CCHHHHHHHC----TTSEEEEEESSHHHHHHH--HHHTCSEEEEECSSCC----CCCCCHH
T ss_pred HHHHHcCCCEEEECCcc--CCHHHHHHhC----CCCEEEEecCCHHHHHHH--HhcCCCEEEEcCCccCCCCCCCCCcCH
Confidence 45567899999876422 1233444432 234444556665443221 1123799998641 1000001 11111
Q ss_pred HHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccCCCCHHHHHHHHHHHHHH
Q 012943 352 LLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALR 428 (453)
Q Consensus 352 ~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~ 428 (453)
...+++ ++...+|++.+. . -+.. ++..+...|+|++.+++---..+-|.+.++.+.+.+++
T Consensus 152 ~~l~~l---~~~~~~pvia~G--------G--I~~~---nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~~~~~ 212 (215)
T 1xi3_A 152 EGLRKI---VESVKIPVVAIG--------G--INKD---NAREVLKTGVDGIAVISAVMGAEDVRKATEELRKIVEE 212 (215)
T ss_dssp HHHHHH---HHHCSSCEEEES--------S--CCTT---THHHHHTTTCSEEEESHHHHTSSSHHHHHHHHHHHHHH
T ss_pred HHHHHH---HHhCCCCEEEEC--------C--cCHH---HHHHHHHcCCCEEEEhHHHhCCCCHHHHHHHHHHHHhh
Confidence 222222 233478988752 2 2222 34455678999999886555566788888888777664
No 97
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=80.76 E-value=21 Score=35.23 Aligned_cols=125 Identities=16% Similarity=0.243 Sum_probs=65.2
Q ss_pred HhhHHHHHhhhhcC--CcEEEecccc-CHHHHHHHHHHHHhcCCCceEEEE-ecChhhhccHHHHHhh-cCEEEEeCC-C
Q 012943 267 DKDWEDIKFGVDNQ--VDFYAVSFVK-DAKVVHELKDYLKSCNADIHVIVK-IESADSIPNLHSIISA-SDGAMVARG-D 340 (453)
Q Consensus 267 ekD~~DI~~a~~~g--vd~I~lSfV~-sa~dv~~v~~~L~~~~~~i~IIak-IET~~gv~NldeI~~~-sDgImIgRG-D 340 (453)
+.+.+.++...+.| +++|.+.... .+....+.-+.+.+.-..+.++.. |-|+ +......++ +|+|.++-+ -
T Consensus 105 ~~~~~~a~~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~~~~~~~vi~G~v~s~---e~A~~a~~aGad~Ivvs~hgG 181 (336)
T 1ypf_A 105 EDEYEFVQQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKKHLPESFVIAGNVGTP---EAVRELENAGADATKVGIGPG 181 (336)
T ss_dssp HHHHHHHHHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHHHCTTSEEEEEEECSH---HHHHHHHHHTCSEEEECSSCS
T ss_pred HHHHHHHHHHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHHhCCCCEEEECCcCCH---HHHHHHHHcCCCEEEEecCCC
Confidence 45566666777888 8987664311 122222222223332233556654 5443 333333344 899999411 0
Q ss_pred --c-c---ccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCc
Q 012943 341 --L-G---AELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGE 408 (453)
Q Consensus 341 --L-g---~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~E 408 (453)
+ + ...+.+.+ ....+.+.+.+.++|+|.+ .+.-+ ..|+..++..|+|+||+..-
T Consensus 182 ~~~~~~~~~~~g~~g~--~~~~l~~v~~~~~ipVIa~---------GGI~~---g~Dv~kalalGAdaV~iGr~ 241 (336)
T 1ypf_A 182 KVCITKIKTGFGTGGW--QLAALRWCAKAASKPIIAD---------GGIRT---NGDVAKSIRFGATMVMIGSL 241 (336)
T ss_dssp TTCHHHHHHSCSSTTC--HHHHHHHHHHTCSSCEEEE---------SCCCS---THHHHHHHHTTCSEEEESGG
T ss_pred ceeecccccCcCCchh--HHHHHHHHHHHcCCcEEEe---------CCCCC---HHHHHHHHHcCCCEEEeChh
Confidence 0 0 00111100 1223444445558998875 33333 56788999999999998543
No 98
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=80.57 E-value=38 Score=31.73 Aligned_cols=135 Identities=13% Similarity=0.085 Sum_probs=76.0
Q ss_pred HHHHhhhhcCCcEE--Eec-cccCHH----HHHHHHHHHHhcCCCceEEEEecChhhh--------ccHHHHHhh-----
Q 012943 271 EDIKFGVDNQVDFY--AVS-FVKDAK----VVHELKDYLKSCNADIHVIVKIESADSI--------PNLHSIISA----- 330 (453)
Q Consensus 271 ~DI~~a~~~gvd~I--~lS-fV~sa~----dv~~v~~~L~~~~~~i~IIakIET~~gv--------~NldeI~~~----- 330 (453)
+.++.+++.|+|.| .+. ...+.+ ++.++.++..+.+ +++++.+- +.|+ +++++.+..
T Consensus 103 ~~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g--~~viv~~~-~~G~~l~~~~~~~~~~~~a~~a~~~G 179 (273)
T 2qjg_A 103 TTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWG--MPLIAMMY-PRGKHIQNERDPELVAHAARLGAELG 179 (273)
T ss_dssp SCHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHT--CCEEEEEE-ECSTTCSCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcC--CCEEEEeC-CCCcccCCCCCHhHHHHHHHHHHHcC
Confidence 45666788999998 332 122222 3444555554443 44555440 1111 334443222
Q ss_pred cCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCC-chHHH-HHHHHHHHhCccEEEecCc
Q 012943 331 SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTP-TRAEV-SDIAIAVREGADAVMLSGE 408 (453)
Q Consensus 331 sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~P-trAEv-~Dv~nav~~G~D~vmLs~E 408 (453)
+|.|.++.. .+ + ...+++ +...+.|++.+ ....+ +..+. ..+..++..|+|+++....
T Consensus 180 ad~i~~~~~-----~~---~-~~l~~i---~~~~~ipvva~--------GGi~~~~~~~~~~~~~~~~~~Ga~gv~vg~~ 239 (273)
T 2qjg_A 180 ADIVKTSYT-----GD---I-DSFRDV---VKGCPAPVVVA--------GGPKTNTDEEFLQMIKDAMEAGAAGVAVGRN 239 (273)
T ss_dssp CSEEEECCC-----SS---H-HHHHHH---HHHCSSCEEEE--------CCSCCSSHHHHHHHHHHHHHHTCSEEECCHH
T ss_pred CCEEEECCC-----CC---H-HHHHHH---HHhCCCCEEEE--------eCCCCCCHHHHHHHHHHHHHcCCcEEEeeHH
Confidence 688888731 22 1 122233 34457898874 22222 23332 2266777899999998777
Q ss_pred ccCCCCHHHHHHHHHHHHHH
Q 012943 409 TAHGKFPLKAVKVMHTVALR 428 (453)
Q Consensus 409 TA~G~yP~eaV~~m~~I~~~ 428 (453)
--....|.++++.+.+++.+
T Consensus 240 i~~~~~~~~~~~~l~~~~~~ 259 (273)
T 2qjg_A 240 IFQHDDVVGITRAVCKIVHE 259 (273)
T ss_dssp HHTSSSHHHHHHHHHHHHHH
T ss_pred hhCCCCHHHHHHHHHHHHhc
Confidence 66777899999999888764
No 99
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=80.55 E-value=44 Score=33.66 Aligned_cols=158 Identities=13% Similarity=0.112 Sum_probs=100.2
Q ss_pred CCCHhhHHHHH-hhhhcCCcEEEe-ccccCHHHHHHHHHHHHhcCCCceEEEEec-ChhhhccHHHHHh-h-cC--EEEE
Q 012943 264 SITDKDWEDIK-FGVDNQVDFYAV-SFVKDAKVVHELKDYLKSCNADIHVIVKIE-SADSIPNLHSIIS-A-SD--GAMV 336 (453)
Q Consensus 264 ~ltekD~~DI~-~a~~~gvd~I~l-SfV~sa~dv~~v~~~L~~~~~~i~IIakIE-T~~gv~NldeI~~-~-sD--gImI 336 (453)
.+|..|+-.|. ...+.|++.|=+ +++.++.|...++..... ..+..+.+-.= +..+++..-+-+. + .| .+++
T Consensus 30 ~~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~-~~~~~i~~l~r~~~~di~~a~~al~~ag~~~v~if~ 108 (370)
T 3rmj_A 30 AMTKEEKIRVARQLEKLGVDIIEAGFAAASPGDFEAVNAIAKT-ITKSTVCSLSRAIERDIRQAGEAVAPAPKKRIHTFI 108 (370)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEEEGGGCHHHHHHHHHHHTT-CSSSEEEEEEESSHHHHHHHHHHHTTSSSEEEEEEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHHh-CCCCeEEEEecCCHHHHHHHHHHHhhCCCCEEEEEe
Confidence 56788876664 445689999866 455678888888776543 34555544431 3444433222221 1 23 5777
Q ss_pred eCCCcccc----CCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHH-HHHhCccEEEecCcccC
Q 012943 337 ARGDLGAE----LPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI-AVREGADAVMLSGETAH 411 (453)
Q Consensus 337 gRGDLg~e----lg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~n-av~~G~D~vmLs~ETA~ 411 (453)
+-.|+-.. ...+++.....++++.|+++|..|.+..+ ....-+...+.+++. +...|+|.+.| .+|.=
T Consensus 109 ~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~~~~e------d~~r~~~~~~~~~~~~~~~~Ga~~i~l-~DT~G 181 (370)
T 3rmj_A 109 ATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDVEFSCE------DALRSEIDFLAEICGAVIEAGATTINI-PDTVG 181 (370)
T ss_dssp ECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCEEEEEE------TGGGSCHHHHHHHHHHHHHHTCCEEEE-ECSSS
T ss_pred cCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEEEecC------CCCccCHHHHHHHHHHHHHcCCCEEEe-cCccC
Confidence 77776443 22345666667789999999998876533 111222223445444 46689999999 58998
Q ss_pred CCCHHHHHHHHHHHHHHH
Q 012943 412 GKFPLKAVKVMHTVALRT 429 (453)
Q Consensus 412 G~yP~eaV~~m~~I~~~a 429 (453)
...|.+.-++++.+..+.
T Consensus 182 ~~~P~~~~~lv~~l~~~~ 199 (370)
T 3rmj_A 182 YSIPYKTEEFFRELIAKT 199 (370)
T ss_dssp CCCHHHHHHHHHHHHHHS
T ss_pred CcCHHHHHHHHHHHHHhC
Confidence 899999988888887654
No 100
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=80.05 E-value=3.8 Score=38.55 Aligned_cols=143 Identities=15% Similarity=0.129 Sum_probs=86.0
Q ss_pred CCCCHhhHHHH-HhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh--------cCE
Q 012943 263 PSITDKDWEDI-KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA--------SDG 333 (453)
Q Consensus 263 p~ltekD~~DI-~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~--------sDg 333 (453)
|..|..|.+.+ +.+.+.|++.|+++ +..+...++++. +.++.+.+-|=.|.|-.+.+..+.. +|.
T Consensus 14 p~~t~~~i~~l~~~a~~~~~~aVcv~----p~~v~~~~~~l~--~~~v~v~~vigFP~G~~~~~~k~~e~~~Ai~~GAde 87 (220)
T 1ub3_A 14 PTATLEEVAKAAEEALEYGFYGLCIP----PSYVAWVRARYP--HAPFRLVTVVGFPLGYQEKEVKALEAALACARGADE 87 (220)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEECC----GGGHHHHHHHCT--TCSSEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEC----HHHHHHHHHHhC--CCCceEEEEecCCCCCCchHHHHHHHHHHHHcCCCE
Confidence 66688887555 67788999999875 455666666663 4468888888776665554433322 454
Q ss_pred EEEeCCCccccCCC------CCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHH-HHHhCccEEEec
Q 012943 334 AMVARGDLGAELPI------EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI-AVREGADAVMLS 406 (453)
Q Consensus 334 ImIgRGDLg~elg~------e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~n-av~~G~D~vmLs 406 (453)
|-+- +.+|. +.+..-...+.++|...+.+||+-|-. ++..|+...++ +...|+|.|=-|
T Consensus 88 vd~v-----inig~~~~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~---------l~~e~i~~a~~ia~eaGADfVKTs 153 (220)
T 1ub3_A 88 VDMV-----LHLGRAKAGDLDYLEAEVRAVREAVPQAVLKVILETGY---------FSPEEIARLAEAAIRGGADFLKTS 153 (220)
T ss_dssp EEEE-----CCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEEECCGGG---------SCHHHHHHHHHHHHHHTCSEEECC
T ss_pred EEec-----ccchhhhCCCHHHHHHHHHHHHHHHcCCCceEEEecCC---------CCHHHHHHHHHHHHHhCCCEEEeC
Confidence 4321 12221 234444456666665556667775543 35566555443 456899998766
Q ss_pred Cc-ccCCCCHHHHHHHHHHHH
Q 012943 407 GE-TAHGKFPLKAVKVMHTVA 426 (453)
Q Consensus 407 ~E-TA~G~yP~eaV~~m~~I~ 426 (453)
.- +.-|. -++.|+.|++++
T Consensus 154 TGf~~~ga-t~~dv~~m~~~v 173 (220)
T 1ub3_A 154 TGFGPRGA-SLEDVALLVRVA 173 (220)
T ss_dssp CSSSSCCC-CHHHHHHHHHHH
T ss_pred CCCCCCCC-CHHHHHHHHHhh
Confidence 21 11222 348999999874
No 101
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=79.20 E-value=33 Score=35.31 Aligned_cols=122 Identities=18% Similarity=0.201 Sum_probs=72.9
Q ss_pred hhHHHHHhhhhcCCcEEEecccc-CHHH-HHHHHHHHHhcCCCceEEE-EecChhhhccHHHHHhh-cCEEEEeCCC--c
Q 012943 268 KDWEDIKFGVDNQVDFYAVSFVK-DAKV-VHELKDYLKSCNADIHVIV-KIESADSIPNLHSIISA-SDGAMVARGD--L 341 (453)
Q Consensus 268 kD~~DI~~a~~~gvd~I~lSfV~-sa~d-v~~v~~~L~~~~~~i~IIa-kIET~~gv~NldeI~~~-sDgImIgRGD--L 341 (453)
...+.+.++.+.|+|.|.+.... ..+. +..++.+.... ..+.+++ .|-|.+.... .++. +|+|.+|-|- .
T Consensus 233 ~~~~~a~~l~~~G~d~ivi~~a~g~~~~~~~~i~~l~~~~-p~~pvi~G~v~t~~~a~~---~~~~Gad~I~vg~g~g~~ 308 (491)
T 1zfj_A 233 DTFERAEALFEAGADAIVIDTAHGHSAGVLRKIAEIRAHF-PNRTLIAGNIATAEGARA---LYDAGVDVVKVGIGPGSI 308 (491)
T ss_dssp THHHHHHHHHHHTCSEEEECCSCTTCHHHHHHHHHHHHHC-SSSCEEEEEECSHHHHHH---HHHTTCSEEEECSSCCTT
T ss_pred hHHHHHHHHHHcCCCeEEEeeecCcchhHHHHHHHHHHHC-CCCcEeCCCccCHHHHHH---HHHcCCCEEEECccCCcc
Confidence 44677888889999999887532 1122 22233322222 2444553 5666544432 2233 8999997431 0
Q ss_pred c-----ccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEec
Q 012943 342 G-----AELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (453)
Q Consensus 342 g-----~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (453)
. ...+.+ ...+.+++...+.+.+.|+|.. .+.-+ ..|++.++..|+|++++.
T Consensus 309 ~~tr~~~~~~~p-~~~~l~~~~~~~~~~~ipvia~---------GGi~~---~~di~kal~~GA~~v~vG 365 (491)
T 1zfj_A 309 CTTRVVAGVGVP-QVTAIYDAAAVAREYGKTIIAD---------GGIKY---SGDIVKALAAGGNAVMLG 365 (491)
T ss_dssp BCHHHHTCCCCC-HHHHHHHHHHHHHHTTCEEEEE---------SCCCS---HHHHHHHHHTTCSEEEES
T ss_pred eEEeeecCCCCC-cHHHHHHHHHHHhhcCCCEEee---------CCCCC---HHHHHHHHHcCCcceeeC
Confidence 0 011222 3445577777788889998874 34444 567889999999999984
No 102
>1at0_A 17-hedgehog; developmental signaling molecule, cholesterol transfer, signaling protein; 1.90A {Drosophila melanogaster} SCOP: b.86.1.1
Probab=79.07 E-value=6 Score=34.53 Aligned_cols=62 Identities=19% Similarity=0.135 Sum_probs=37.4
Q ss_pred eeecCCCEEEEEeecCCCCccEEEeccc-------ccccccccCCEEEEeCC----eeEEEEEEEe---CCeEEEEEeeC
Q 012943 179 IILKEGQEFNFTIKRGVSTEDTVSVNYD-------DFVNDVEVGDILLVDGG----MMSLAVKSKT---KDLVKCIVVDG 244 (453)
Q Consensus 179 i~L~~G~~v~lt~~~~~~~~~~I~v~~~-------~l~~~vk~Gd~IlIDDG----~I~L~V~ev~---~~~v~~~V~ng 244 (453)
+..+.|..+++|.+ ..|++... -+..+|++||.|++.|| ...-+|.++. ...+.|=....
T Consensus 58 I~t~~g~~L~lTp~------H~i~v~~~~~~~~~~v~A~~l~~GD~v~~~~~~~~~~~~~~V~~v~~~~~~G~yaPlT~~ 131 (145)
T 1at0_A 58 LHTDGGAVLTVTPA------HLVSVWQPESQKLTFVFADRIEEKNQVLVRDVETGELRPQRVVKVGSVRSKGVVAPLTRE 131 (145)
T ss_dssp EEETTSCEEEECTT------CEEEEEETTTTEEEEEEGGGCCTTCEEEEECTTTCCEEEEEEEEEEEEEEEEEEEEEESS
T ss_pred EEECCCCEEEEeCC------CEEEEecCCCCcEEEEEHHHCcCCCEEEEecCCCCCEEEEEEEEEEEEEEeeeEccccCc
Confidence 44556777777754 34444332 36789999999999987 2334455543 34466644444
Q ss_pred cE
Q 012943 245 GE 246 (453)
Q Consensus 245 G~ 246 (453)
|.
T Consensus 132 Gt 133 (145)
T 1at0_A 132 GT 133 (145)
T ss_dssp SE
T ss_pred EE
Confidence 43
No 103
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=79.00 E-value=21 Score=33.29 Aligned_cols=129 Identities=10% Similarity=0.042 Sum_probs=70.4
Q ss_pred HhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHH----HHHhh-----cCEEEEeCCCcccc
Q 012943 274 KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLH----SIISA-----SDGAMVARGDLGAE 344 (453)
Q Consensus 274 ~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~Nld----eI~~~-----sDgImIgRGDLg~e 344 (453)
+...+.|+|+|.+.-.-..+-+..+.+++.+.+..+.+++..-++.+.+.+. .++.. .||++.+.
T Consensus 85 ~~~~~~gad~vtvh~~~G~~~l~~~~~~~~~~g~~v~vLt~~s~~~~~~~~~~~~~~~a~~a~~~G~~GvV~~a------ 158 (228)
T 3m47_A 85 RATFKAGADAIIVHGFPGADSVRACLNVAEEMGREVFLLTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVGPS------ 158 (228)
T ss_dssp HHHHHTTCSEEEEESTTCHHHHHHHHHHHHHHTCEEEEECCCCSGGGGTTHHHHHHHHHHHHHHTTCCEEECCS------
T ss_pred HHHHhCCCCEEEEeccCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHHHHHHHHHHHHHHHhCCcEEEECC------
Confidence 4445789999988654445567777788776666555555665554433222 22221 47766532
Q ss_pred CCCCCHHHHHHHHHHHHHHcCC-CEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccCCCCHHHHHHHHH
Q 012943 345 LPIEDVPLLQEDIIRRCRSMQK-PVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMH 423 (453)
Q Consensus 345 lg~e~v~~aqk~Ii~~c~~aGk-pvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~ 423 (453)
.+ +..-+.+-+ ..|. ..++. + +. +++-.+. .++..|+|.++...-.-...-|.++++.+.
T Consensus 159 ---t~-~~e~~~ir~---~~~~~~~iv~-P--------GI--~~~g~~p-~~~~aGad~iVvGr~I~~a~dp~~a~~~~~ 219 (228)
T 3m47_A 159 ---TR-PERLSRLRE---IIGQDSFLIS-P--------GV--GAQGGDP-GETLRFADAIIVGRSIYLADNPAAAAAGAI 219 (228)
T ss_dssp ---SC-HHHHHHHHH---HHCSSSEEEE-C--------C------------CGGGTCSEEEECHHHHTSSCHHHHHHHHH
T ss_pred ---CC-hHHHHHHHH---hcCCCCEEEe-c--------Cc--CcCCCCH-hHHHcCCCEEEECHHHhCCCCHHHHHHHHH
Confidence 11 111122222 2343 23332 1 10 2233345 778899999998776667788999998887
Q ss_pred HHHH
Q 012943 424 TVAL 427 (453)
Q Consensus 424 ~I~~ 427 (453)
+.+.
T Consensus 220 ~~~~ 223 (228)
T 3m47_A 220 ESIK 223 (228)
T ss_dssp HHC-
T ss_pred HHHH
Confidence 7654
No 104
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=78.83 E-value=5.4 Score=41.02 Aligned_cols=153 Identities=20% Similarity=0.246 Sum_probs=97.1
Q ss_pred HHHHHhhhhcCCcEEEeccccCHHHHHHH---HHHHHhcCCCceEEEEe--cChhhhccHHHHHhhcCEEEEeCCCcccc
Q 012943 270 WEDIKFGVDNQVDFYAVSFVKDAKVVHEL---KDYLKSCNADIHVIVKI--ESADSIPNLHSIISASDGAMVARGDLGAE 344 (453)
Q Consensus 270 ~~DI~~a~~~gvd~I~lSfV~sa~dv~~v---~~~L~~~~~~i~IIakI--ET~~gv~NldeI~~~sDgImIgRGDLg~e 344 (453)
.+.|....+.|.|.|-++ |.+.++...+ ++.|...+.+++++|=| .-..++..+++.++..|.+-|-||.++-.
T Consensus 41 v~QI~~L~~aG~eiVRva-Vp~~~~A~al~~I~~~l~~~~~~vPLVADiHF~~~~al~a~~~~a~~~dkiRINPGNig~~ 119 (406)
T 4g9p_A 41 TAQVLELHRAGSEIVRLT-VNDEEAAKAVPEIKRRLLAEGVEVPLVGDFHFNGHLLLRKYPKMAEALDKFRINPGTLGRG 119 (406)
T ss_dssp HHHHHHHHHHTCSEEEEE-CCSHHHHHHHHHHHHHHHHTTCCCCEEEECCSSHHHHHHHCHHHHHHCSEEEECTTSSCST
T ss_pred HHHHHHHHHcCCCEEEEe-cCCHHHHHhHHHHHHHHHhcCCCCceEeeecccHHHHHHHHHHHHhHHhhcccCccccCcc
Confidence 455555567899998877 5666666554 55566677899999977 34567777788888899999999987621
Q ss_pred CCCCCHHHHHHHHHHHHHHcCCCEEEEe--c-----hhhhhc----cCCCCchH-----H--HHH----HHHHHHhCc--
Q 012943 345 LPIEDVPLLQEDIIRRCRSMQKPVIVAT--N-----MLESMI----DHPTPTRA-----E--VSD----IAIAVREGA-- 400 (453)
Q Consensus 345 lg~e~v~~aqk~Ii~~c~~aGkpvi~aT--q-----mLeSM~----~~~~PtrA-----E--v~D----v~nav~~G~-- 400 (453)
.+...--+.++++|+++|+|+=+-. . +|+.+. ..+.|.-+ | +.- +.-+...|.
T Consensus 120 ---~k~~e~~~~vv~~ak~~~~pIRIGVN~GSL~~~ll~k~~d~~~~~~~p~~~~~v~~eamVeSAl~~~~~~~~~~f~~ 196 (406)
T 4g9p_A 120 ---RHKDEHFAEMIRIAMDLGKPVRIGANWGSLDPALLTELMDRNASRPEPKSAHEVVLEALVESAVRAYEAALEMGLGE 196 (406)
T ss_dssp ---HHHHHHHHHHHHHHHHHTCCEEEEEEGGGCCHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHHHHHHTCCG
T ss_pred ---ccHHHHHHHHHHHHHHccCCceeccccccccHHHHHHhhcccccCCCccchhhhHHHHHHHHHHHHHHHHHHcCCCh
Confidence 1233445789999999999964433 2 233321 23444211 2 111 112223454
Q ss_pred cEEEecCcccCCCCHHHHHHHHHHHHHHH
Q 012943 401 DAVMLSGETAHGKFPLKAVKVMHTVALRT 429 (453)
Q Consensus 401 D~vmLs~ETA~G~yP~eaV~~m~~I~~~a 429 (453)
|-+++|- +-.-+...|+.-+.++.+.
T Consensus 197 ~~iviS~---KaSdv~~~i~aYr~la~~~ 222 (406)
T 4g9p_A 197 DKLVLSA---KVSKARDLVWVYRELARRT 222 (406)
T ss_dssp GGEEEEE---ECSSHHHHHHHHHHHHHHC
T ss_pred hheEEEe---ecCCHHHHHHHHHHHHHhC
Confidence 6688873 3445777888777777654
No 105
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=78.27 E-value=38 Score=31.16 Aligned_cols=132 Identities=17% Similarity=0.206 Sum_probs=70.0
Q ss_pred HHHHHhhhhcCCcEEEecc--ccCHHHHHHHHHHHHhcCC-CceEEE---------EecCh--------hhhccHHHHHh
Q 012943 270 WEDIKFGVDNQVDFYAVSF--VKDAKVVHELKDYLKSCNA-DIHVIV---------KIESA--------DSIPNLHSIIS 329 (453)
Q Consensus 270 ~~DI~~a~~~gvd~I~lSf--V~sa~dv~~v~~~L~~~~~-~i~IIa---------kIET~--------~gv~NldeI~~ 329 (453)
.++++.++..|+|+|.+.- ..+++.+.++.+.+ +. .+.+.. .+++. ..++.+.++.+
T Consensus 87 ~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~~~~~---~~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~ 163 (252)
T 1ka9_F 87 LEDARKLLLSGADKVSVNSAAVRRPELIRELADHF---GAQAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGVE 163 (252)
T ss_dssp HHHHHHHHHHTCSEEEECHHHHHCTHHHHHHHHHH---CGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEChHHHhCcHHHHHHHHHc---CCCcEEEEEEEecCCCCEEEEECCCccccCCcHHHHHHHHHH
Confidence 3566667778999998853 34444444444433 32 222221 12221 12333444444
Q ss_pred h-cCEEEEeC-C-CccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEec
Q 012943 330 A-SDGAMVAR-G-DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (453)
Q Consensus 330 ~-sDgImIgR-G-DLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (453)
. ++++++-. + | +...|+ .+ ...++ .+...+.|++.. .+.-+.. |+..+...|+|++|..
T Consensus 164 ~G~~~i~~~~~~~~-g~~~g~-~~-~~i~~---l~~~~~ipvia~---------GGI~~~~---d~~~~~~~Gadgv~vg 225 (252)
T 1ka9_F 164 LGAGEILLTSMDRD-GTKEGY-DL-RLTRM---VAEAVGVPVIAS---------GGAGRME---HFLEAFQAGAEAALAA 225 (252)
T ss_dssp HTCCEEEEEETTTT-TTCSCC-CH-HHHHH---HHHHCSSCEEEE---------SCCCSHH---HHHHHHHTTCSEEEES
T ss_pred cCCCEEEEecccCC-CCcCCC-CH-HHHHH---HHHHcCCCEEEe---------CCCCCHH---HHHHHHHCCCHHHHHH
Confidence 4 78888742 1 2 222232 22 22222 234558998874 5555544 4555556799999987
Q ss_pred CcccCCC-CHHHHHHHH
Q 012943 407 GETAHGK-FPLKAVKVM 422 (453)
Q Consensus 407 ~ETA~G~-yP~eaV~~m 422 (453)
.---.+. -|.++.+.+
T Consensus 226 sal~~~~~~~~~~~~~l 242 (252)
T 1ka9_F 226 SVFHFGEIPIPKLKRYL 242 (252)
T ss_dssp HHHHTTSSCHHHHHHHH
T ss_pred HHHHcCCCCHHHHHHHH
Confidence 6555666 555666654
No 106
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=78.24 E-value=43 Score=31.00 Aligned_cols=144 Identities=15% Similarity=0.171 Sum_probs=81.0
Q ss_pred CCCCHhhHHHH-HhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHh-------h-cCE
Q 012943 263 PSITDKDWEDI-KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIIS-------A-SDG 333 (453)
Q Consensus 263 p~ltekD~~DI-~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~-------~-sDg 333 (453)
|..|..+.+.+ +.+.+.|++.|+++ +.-+...++.+. .+++.+-++-|.|......... . +|+
T Consensus 15 p~~t~~~i~~l~~~a~~~g~~~v~v~----~~~v~~~~~~l~----~v~v~~v~~~P~g~~~~~~k~~~~~~A~~~Gad~ 86 (225)
T 1mzh_A 15 PHLSEKEIEEFVLKSEELGIYAVCVN----PYHVKLASSIAK----KVKVCCVIGFPLGLNKTSVKVKEAVEAVRDGAQE 86 (225)
T ss_dssp TTCCHHHHHHHHHHHHHTTCSEEEEC----GGGHHHHHHHCS----SSEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHHHHHHHHHhCCeEEEEC----HHHHHHHHHHhc----CCceeeEecCCCCccchhhhHHHHHHHHHcCCCE
Confidence 66788888666 56778999998753 445655555552 5788888887877755543222 1 466
Q ss_pred EEEeCCCccccCCC---CCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHH-HHhCccEEEecCcc
Q 012943 334 AMVARGDLGAELPI---EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIA-VREGADAVMLSGET 409 (453)
Q Consensus 334 ImIgRGDLg~elg~---e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~na-v~~G~D~vmLs~ET 409 (453)
|=+ -+.+|. .+-..+.+. +++.+++..|+++-- ++|+ +.-+..++..++.. ...|+|++..+..-
T Consensus 87 Id~-----viN~g~~~~~~~~~~~~~-i~~v~~a~~pv~vKv-i~e~----~~l~~~~~~~~a~~a~eaGad~I~tstg~ 155 (225)
T 1mzh_A 87 LDI-----VWNLSAFKSEKYDFVVEE-LKEIFRETPSAVHKV-IVET----PYLNEEEIKKAVEICIEAGADFIKTSTGF 155 (225)
T ss_dssp EEE-----ECCHHHHHTTCHHHHHHH-HHHHHHTCTTSEEEE-ECCG----GGCCHHHHHHHHHHHHHHTCSEEECCCSC
T ss_pred EEE-----EecHHHHhcCChHHHHHH-HHHHHHHhcCceEEE-EEeC----CCCCHHHHHHHHHHHHHhCCCEEEECCCC
Confidence 542 111111 122233333 555555544765531 2332 33455566666554 55699999444321
Q ss_pred cCCCCHHHHHHHHHHH
Q 012943 410 AHGKFPLKAVKVMHTV 425 (453)
Q Consensus 410 A~G~yP~eaV~~m~~I 425 (453)
..|.+-.+.++.|++.
T Consensus 156 ~~gga~~~~i~~v~~~ 171 (225)
T 1mzh_A 156 APRGTTLEEVRLIKSS 171 (225)
T ss_dssp SSSCCCHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHH
Confidence 1244456777777654
No 107
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=77.98 E-value=66 Score=33.08 Aligned_cols=154 Identities=10% Similarity=0.096 Sum_probs=90.9
Q ss_pred CCCHhhHHHH-HhhhhcCCcEEEecc-ccCHHHHHHHHHHHHhcCCCceEEEEe-cChhhhccHHHHHhh-cC--EEEEe
Q 012943 264 SITDKDWEDI-KFGVDNQVDFYAVSF-VKDAKVVHELKDYLKSCNADIHVIVKI-ESADSIPNLHSIISA-SD--GAMVA 337 (453)
Q Consensus 264 ~ltekD~~DI-~~a~~~gvd~I~lSf-V~sa~dv~~v~~~L~~~~~~i~IIakI-ET~~gv~NldeI~~~-sD--gImIg 337 (453)
.+|..++-.| +...+.|+|.|=+.| ..++.+...++... +.+....+.+.+ .+.+++ +..++. .| .++++
T Consensus 57 ~~s~eeKl~Ia~~L~~~Gv~~IEvG~P~asp~d~~~~~~i~-~~~~~~~v~~~~r~~~~di---~~A~~aG~~~V~i~~s 132 (423)
T 3ivs_A 57 FFDTEKKIQIAKALDNFGVDYIELTSPVASEQSRQDCEAIC-KLGLKCKILTHIRCHMDDA---RVAVETGVDGVDVVIG 132 (423)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHH-TSCCSSEEEEEEESCHHHH---HHHHHTTCSEEEEEEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEeecccCHHHHHHHHHHH-hcCCCCEEEEeeccChhhH---HHHHHcCCCEEEEEee
Confidence 3577777555 445678999998854 45666666565443 445555555432 333332 222222 45 56666
Q ss_pred CCCccccC----CCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHH-HHHhCccEEEecCcccCC
Q 012943 338 RGDLGAEL----PIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI-AVREGADAVMLSGETAHG 412 (453)
Q Consensus 338 RGDLg~el----g~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~n-av~~G~D~vmLs~ETA~G 412 (453)
-.|+-... ..+++.....++++.|+++|..|.+... + ....+...+.+++. +...|+|.+.| .+|.=.
T Consensus 133 ~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~~e--d----a~r~d~~~~~~v~~~~~~~Ga~~i~l-~DTvG~ 205 (423)
T 3ivs_A 133 TSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFSSE--D----SFRSDLVDLLSLYKAVDKIGVNRVGI-ADTVGC 205 (423)
T ss_dssp C-------------CHHHHHHHHHHHHHHTTTCEEEEEEE--S----GGGSCHHHHHHHHHHHHHHCCSEEEE-EETTSC
T ss_pred ccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEEEEEEc--c----CcCCCHHHHHHHHHHHHHhCCCcccc-CCccCc
Confidence 66654332 3355666778899999999999887522 1 11223333455544 45679999888 588888
Q ss_pred CCHHHHHHHHHHHHHH
Q 012943 413 KFPLKAVKVMHTVALR 428 (453)
Q Consensus 413 ~yP~eaV~~m~~I~~~ 428 (453)
..|-+.-++++.+..+
T Consensus 206 ~~P~~v~~lv~~l~~~ 221 (423)
T 3ivs_A 206 ATPRQVYDLIRTLRGV 221 (423)
T ss_dssp CCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhh
Confidence 8999888887777653
No 108
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=77.71 E-value=40 Score=32.23 Aligned_cols=124 Identities=9% Similarity=0.130 Sum_probs=79.1
Q ss_pred HHHHHhhhhcCCcEEEeccc--cC---------HHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhhcCEEEEeC
Q 012943 270 WEDIKFGVDNQVDFYAVSFV--KD---------AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVAR 338 (453)
Q Consensus 270 ~~DI~~a~~~gvd~I~lSfV--~s---------a~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~sDgImIgR 338 (453)
++-++.+.+.|+|.|-...- ++ .+.+..++++..+. .+.+++-+-.+..++-+.+ ..|.+-||.
T Consensus 40 ~~~a~~l~~~Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~~--Gl~~~te~~d~~~~~~l~~---~vd~~kIga 114 (262)
T 1zco_A 40 MKVAEFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEY--GLVTVTEVMDTRHVELVAK---YSDILQIGA 114 (262)
T ss_dssp HHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH--TCEEEEECCCGGGHHHHHH---HCSEEEECG
T ss_pred HHHHHHHHHcCCCEEEEEecccCCCcccccCccHHHHHHHHHHHHHc--CCcEEEeeCCHHhHHHHHh---hCCEEEECc
Confidence 35556667789998766432 12 67788888888664 5778888888777655555 479999997
Q ss_pred CCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHh-Cc-cEEEe-cCcccCCCCH
Q 012943 339 GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVRE-GA-DAVML-SGETAHGKFP 415 (453)
Q Consensus 339 GDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~-G~-D~vmL-s~ETA~G~yP 415 (453)
+++. .. .+++++.+.||||++.|. ..+|..|+.+.+..+.. |. +.+++ .|-+..-+||
T Consensus 115 ~~~~------n~-----~ll~~~a~~~kPV~lk~G--------~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~ 175 (262)
T 1zco_A 115 RNSQ------NF-----ELLKEVGKVENPVLLKRG--------MGNTIQELLYSAEYIMAQGNENVILCERGIRTFETAT 175 (262)
T ss_dssp GGTT------CH-----HHHHHHTTSSSCEEEECC--------TTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSS
T ss_pred cccc------CH-----HHHHHHHhcCCcEEEecC--------CCCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcC
Confidence 7653 22 234445558999999532 23577887777766653 54 44443 3323333666
Q ss_pred HH
Q 012943 416 LK 417 (453)
Q Consensus 416 ~e 417 (453)
.+
T Consensus 176 ~~ 177 (262)
T 1zco_A 176 RF 177 (262)
T ss_dssp SS
T ss_pred hh
Confidence 55
No 109
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=77.05 E-value=6.2 Score=38.80 Aligned_cols=145 Identities=19% Similarity=0.156 Sum_probs=85.2
Q ss_pred CCCCHhhHHHH-HhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHh----h----cCE
Q 012943 263 PSITDKDWEDI-KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIIS----A----SDG 333 (453)
Q Consensus 263 p~ltekD~~DI-~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~----~----sDg 333 (453)
|..|..|++.+ +.+.+.|+..|+++ +..+..+++.|. +..+.|.+-|==|.|-...+.-+. + +|.
T Consensus 69 p~~T~~dI~~lc~eA~~~g~aaVCV~----P~~V~~a~~~L~--~s~V~V~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdE 142 (288)
T 3oa3_A 69 LSATGSQIDVLCAEAKEYGFATVCVR----PDYVSRAVQYLQ--GTQVGVTCVIGFHEGTYSTDQKVSEAKRAMQNGASE 142 (288)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHHHHTT--TSSCEEEEEESTTTSCSCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEC----HHHHHHHHHHcC--CCCCeEEEEeCCCCCCCcHHHHHHHHHHHHHcCCCE
Confidence 66788888665 67889999999886 667888888873 456778777755555433332222 1 343
Q ss_pred EEEeCCCccccCCC---CCHHHHHHHHHHHHHHcCC---CEEEEechhhhhccCCCCchHHHHHHH-HHHHhCccEEEec
Q 012943 334 AMVARGDLGAELPI---EDVPLLQEDIIRRCRSMQK---PVIVATNMLESMIDHPTPTRAEVSDIA-IAVREGADAVMLS 406 (453)
Q Consensus 334 ImIgRGDLg~elg~---e~v~~aqk~Ii~~c~~aGk---pvi~aTqmLeSM~~~~~PtrAEv~Dv~-nav~~G~D~vmLs 406 (453)
|=+ -+.+|. .+...+.+.|-....+.+. .||+-|- ..+..|+.... -+...|+|.|=-|
T Consensus 143 IDm-----VINig~lk~g~~~~v~~eI~~V~~a~~~~~lKVIlEt~---------~Lt~eei~~A~~ia~eaGADfVKTS 208 (288)
T 3oa3_A 143 LDM-----VMNYPWLSEKRYTDVFQDIRAVRLAAKDAILKVILETS---------QLTADEIIAGCVLSSLAGADYVKTS 208 (288)
T ss_dssp EEE-----ECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGG---------GCCHHHHHHHHHHHHHTTCSEEECC
T ss_pred EEE-----EeehhhhcCCcHHHHHHHHHHHHHHhcCCCceEEEECC---------CCCHHHHHHHHHHHHHcCCCEEEcC
Confidence 321 122332 2334444444443333343 3454333 33566655443 3566899999876
Q ss_pred Cc-ccCCCCHHHHHHHHHHHHHH
Q 012943 407 GE-TAHGKFPLKAVKVMHTVALR 428 (453)
Q Consensus 407 ~E-TA~G~yP~eaV~~m~~I~~~ 428 (453)
.- +..|. -++.|+.|++++..
T Consensus 209 TGf~~~GA-T~edv~lmr~~v~~ 230 (288)
T 3oa3_A 209 TGFNGPGA-SIENVSLMSAVCDS 230 (288)
T ss_dssp CSSSSCCC-CHHHHHHHHHHHHH
T ss_pred CCCCCCCC-CHHHHHHHHHHHHH
Confidence 32 22344 45789999999853
No 110
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=76.88 E-value=47 Score=31.84 Aligned_cols=128 Identities=10% Similarity=-0.010 Sum_probs=66.8
Q ss_pred HhhH-HHHHhhhhcCCc-EEEeccc-----------cCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh---
Q 012943 267 DKDW-EDIKFGVDNQVD-FYAVSFV-----------KDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA--- 330 (453)
Q Consensus 267 ekD~-~DI~~a~~~gvd-~I~lSfV-----------~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~--- 330 (453)
..|. +..+.+.+.|+| +|-+.+- .+++.+.++-+.+.+. .+++|++||=.--..+++.++++.
T Consensus 105 ~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~-~~~Pv~vKi~~~~~~~~~~~~a~~~~~ 183 (311)
T 1jub_A 105 AAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTF-FTKPLGVKLPPYFDLVHFDIMAEILNQ 183 (311)
T ss_dssp HHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTT-CCSCEEEEECCCCSHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHh-cCCCEEEEECCCCCHHHHHHHHHHHHH
Confidence 3444 344555678999 8888652 2444443333333322 257899998422122234343433
Q ss_pred --cCEEEEeCCC---cccc-------------C----CCCCHHHHHHHHHHHHHH-c--CCCEEEEechhhhhccCCCCc
Q 012943 331 --SDGAMVARGD---LGAE-------------L----PIEDVPLLQEDIIRRCRS-M--QKPVIVATNMLESMIDHPTPT 385 (453)
Q Consensus 331 --sDgImIgRGD---Lg~e-------------l----g~e~v~~aqk~Ii~~c~~-a--Gkpvi~aTqmLeSM~~~~~Pt 385 (453)
+|+|.+.-.- +.++ . |....+... +.+...++ . ..|+|.. .+.-+
T Consensus 184 ~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~-~~i~~v~~~~~~~ipvi~~---------GGI~~ 253 (311)
T 1jub_A 184 FPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTAL-ANVRAFYTRLKPEIQIIGT---------GGIET 253 (311)
T ss_dssp SCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHH-HHHHHHHTTSCTTSEEEEE---------SSCCS
T ss_pred cCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHH-HHHHHHHHhcCCCCCEEEE---------CCCCC
Confidence 6888764210 0011 0 111122233 34444444 4 5777764 33434
Q ss_pred hHHHHHHHHHHHhCccEEEecCc
Q 012943 386 RAEVSDIAIAVREGADAVMLSGE 408 (453)
Q Consensus 386 rAEv~Dv~nav~~G~D~vmLs~E 408 (453)
..|+..++..|+|+|++..-
T Consensus 254 ---~~da~~~l~~GAd~V~vg~~ 273 (311)
T 1jub_A 254 ---GQDAFEHLLCGATMLQIGTA 273 (311)
T ss_dssp ---HHHHHHHHHHTCSEEEECHH
T ss_pred ---HHHHHHHHHcCCCEEEEchH
Confidence 45677888899999999643
No 111
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=76.75 E-value=36 Score=31.53 Aligned_cols=138 Identities=9% Similarity=-0.010 Sum_probs=80.2
Q ss_pred hhhcCCcEEEeccccCHHHHHHHHHHHHhcCCC-ceEEEEecChhhhccHHHHHhh-cCEEEEeCCCccccCCCCCHHHH
Q 012943 276 GVDNQVDFYAVSFVKDAKVVHELKDYLKSCNAD-IHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIEDVPLL 353 (453)
Q Consensus 276 a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~-i~IIakIET~~gv~NldeI~~~-sDgImIgRGDLg~elg~e~v~~a 353 (453)
+.+.|+|++.+...-..+.+..+.+.+++.+.. ..+.+-+=|-...+.+.+++.. .|-+.+.++-++-.-|.-.-+.-
T Consensus 78 ~~~~Gad~vtVH~~~g~~~l~~a~~~~~~~g~~~~~~~Vt~lts~~~~~~~~~~~~~~~~~v~~~a~~~~~~Gvv~s~~e 157 (221)
T 3exr_A 78 NAVRGADWMTCICSATIPTMKAARKAIEDINPDKGEIQVELYGDWTYDQAQQWLDAGISQAIYHQSRDALLAGETWGEKD 157 (221)
T ss_dssp HHTTTCSEEEEETTSCHHHHHHHHHHHHHHCTTTCEEEEECCSSCCHHHHHHHHHTTCCEEEEECCHHHHHHTCCCCHHH
T ss_pred HHHcCCCEEEEeccCCHHHHHHHHHHHHhcCCCcceEEEEEcCCCCHHHHHHHHcCCHHHHHHHHHHhcCCCccccCHHH
Confidence 467899999887655566688888888776632 2233333232245666677663 66666666655443343111111
Q ss_pred HHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccCCCCHHHHHHHHHHHHH
Q 012943 354 QEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVAL 427 (453)
Q Consensus 354 qk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~ 427 (453)
-+.+-+.+ ..+.++.+. -.-.|.. +..++..|+|.++...---....|.++++.+++...
T Consensus 158 ~~~ir~~~-~~~~~i~v~--------gGI~~~~-----~~~~~~aGad~~VvG~~I~~a~dp~~a~~~~~~~~~ 217 (221)
T 3exr_A 158 LNKVKKLI-EMGFRVSVT--------GGLSVDT-----LKLFEGVDVFTFIAGRGITEAKNPAGAARAFKDEIK 217 (221)
T ss_dssp HHHHHHHH-HHTCEEEEE--------SSCCGGG-----GGGGTTCCCSEEEECHHHHTSSSHHHHHHHHHHHHH
T ss_pred HHHHHHhh-cCCceEEEE--------CCCCHHH-----HHHHHHCCCCEEEECchhhCCCCHHHHHHHHHHHHH
Confidence 12222223 334444442 2223332 336788999999987655556789999988877654
No 112
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=76.19 E-value=31 Score=31.82 Aligned_cols=133 Identities=10% Similarity=0.064 Sum_probs=68.5
Q ss_pred HHHHHhhhhcCCcEEEeccc--cCHHHHHHHHHHHHhcCC-CceEE--E-------EecChh--------hhccHHHHHh
Q 012943 270 WEDIKFGVDNQVDFYAVSFV--KDAKVVHELKDYLKSCNA-DIHVI--V-------KIESAD--------SIPNLHSIIS 329 (453)
Q Consensus 270 ~~DI~~a~~~gvd~I~lSfV--~sa~dv~~v~~~L~~~~~-~i~II--a-------kIET~~--------gv~NldeI~~ 329 (453)
.+++..+++.|+|+|.+.-. .+++.+ .+++...+. .+.+- + .+++.. .++.+.++.+
T Consensus 86 ~~~~~~~~~~Gad~V~lg~~~l~~p~~~---~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~ 162 (253)
T 1thf_D 86 FETASELILRGADKVSINTAAVENPSLI---TQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEK 162 (253)
T ss_dssp HHHHHHHHHTTCSEEEESHHHHHCTHHH---HHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEChHHHhChHHH---HHHHHHcCCCcEEEEEEEEccCCcEEEEECCCccccCCCHHHHHHHHHH
Confidence 35576677889999987532 233334 344444342 22111 2 222221 2233444444
Q ss_pred h-cCEEEEe-CC-CccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEec
Q 012943 330 A-SDGAMVA-RG-DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (453)
Q Consensus 330 ~-sDgImIg-RG-DLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (453)
. +|.+++- +. | +...|+ .+ ...+++ +...+.|++.. .+.-+.. |+..+...|+|+++..
T Consensus 163 ~G~~~i~~~~~~~~-g~~~g~-~~-~~~~~l---~~~~~ipvia~---------GGI~~~~---d~~~~~~~Gadgv~vG 224 (253)
T 1thf_D 163 RGAGEILLTSIDRD-GTKSGY-DT-EMIRFV---RPLTTLPIIAS---------GGAGKME---HFLEAFLAGADAALAA 224 (253)
T ss_dssp TTCSEEEEEETTTT-TSCSCC-CH-HHHHHH---GGGCCSCEEEE---------SCCCSHH---HHHHHHHTTCSEEEES
T ss_pred CCCCEEEEEeccCC-CCCCCC-CH-HHHHHH---HHhcCCCEEEE---------CCCCCHH---HHHHHHHcCChHHHHH
Confidence 4 6888873 11 2 111232 22 222333 23458898873 4555544 4555556899999986
Q ss_pred CcccCCC-CHHHHHHHHH
Q 012943 407 GETAHGK-FPLKAVKVMH 423 (453)
Q Consensus 407 ~ETA~G~-yP~eaV~~m~ 423 (453)
.---.+. -|.++++.++
T Consensus 225 sal~~~~~~~~~~~~~l~ 242 (253)
T 1thf_D 225 SVFHFREIDVRELKEYLK 242 (253)
T ss_dssp HHHHTTCSCHHHHHHHHH
T ss_pred HHHHcCCCCHHHHHHHHH
Confidence 5444555 5667777653
No 113
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=76.11 E-value=34 Score=30.86 Aligned_cols=127 Identities=13% Similarity=0.099 Sum_probs=68.2
Q ss_pred HhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHh-hcCEEEEeCC-C--c----cccC
Q 012943 274 KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIIS-ASDGAMVARG-D--L----GAEL 345 (453)
Q Consensus 274 ~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~-~sDgImIgRG-D--L----g~el 345 (453)
+.+.+.|+|+|-++... .++..+++.+ +. ..+-.-..|++- +.+... -+|.+.+++- + - +...
T Consensus 88 ~~a~~~gad~v~l~~~~--~~~~~~~~~~---g~-~~~~~s~~t~~e---~~~a~~~g~d~v~~~~v~~t~~~~~~~~~~ 158 (227)
T 2tps_A 88 ELALNLKADGIHIGQED--ANAKEVRAAI---GD-MILGVSAHTMSE---VKQAEEDGADYVGLGPIYPTETKKDTRAVQ 158 (227)
T ss_dssp HHHHHHTCSEEEECTTS--SCHHHHHHHH---TT-SEEEEEECSHHH---HHHHHHHTCSEEEECCSSCCCSSSSCCCCC
T ss_pred HHHHHcCCCEEEECCCc--cCHHHHHHhc---CC-cEEEEecCCHHH---HHHHHhCCCCEEEECCCcCCCCCCCCCCcc
Confidence 34567799999886432 2355555433 33 222222344432 222222 2799998542 1 1 1222
Q ss_pred CCCCHHHHHHHHHHHHHHcC-CCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccCCCCHHHHHHHHHH
Q 012943 346 PIEDVPLLQEDIIRRCRSMQ-KPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHT 424 (453)
Q Consensus 346 g~e~v~~aqk~Ii~~c~~aG-kpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~ 424 (453)
+++.+ +++ +.... +|++.+. ...|. ++..+...|+|++.+.+---..+.|.++++.+.+
T Consensus 159 ~~~~l----~~~---~~~~~~~pvia~G--------GI~~~-----nv~~~~~~Ga~gv~vgs~i~~~~d~~~~~~~~~~ 218 (227)
T 2tps_A 159 GVSLI----EAV---RRQGISIPIVGIG--------GITID-----NAAPVIQAGADGVSMISAISQAEDPESAARKFRE 218 (227)
T ss_dssp TTHHH----HHH---HHTTCCCCEEEES--------SCCTT-----TSHHHHHTTCSEEEESHHHHTSSCHHHHHHHHHH
T ss_pred CHHHH----HHH---HHhCCCCCEEEEc--------CCCHH-----HHHHHHHcCCCEEEEhHHhhcCCCHHHHHHHHHH
Confidence 32222 222 23345 8988752 22222 2334566799999998665555778888888877
Q ss_pred HHHHH
Q 012943 425 VALRT 429 (453)
Q Consensus 425 I~~~a 429 (453)
.+++.
T Consensus 219 ~~~~~ 223 (227)
T 2tps_A 219 EIQTY 223 (227)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 76654
No 114
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=75.53 E-value=57 Score=33.51 Aligned_cols=87 Identities=17% Similarity=0.182 Sum_probs=49.8
Q ss_pred Cce-EEEEecChhhhccHHHHHhh-----cCEEEEeCC-----Cc---cccCC-C--CCH-HHHHHHHHHHHHHc--CCC
Q 012943 308 DIH-VIVKIESADSIPNLHSIISA-----SDGAMVARG-----DL---GAELP-I--EDV-PLLQEDIIRRCRSM--QKP 367 (453)
Q Consensus 308 ~i~-IIakIET~~gv~NldeI~~~-----sDgImIgRG-----DL---g~elg-~--e~v-~~aqk~Ii~~c~~a--Gkp 367 (453)
+.+ |++||=--..-+++.+|++. +|||.+--. |+ ..+.| + ..+ +...+.|-+..++. .+|
T Consensus 268 ~~P~V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iP 347 (415)
T 3i65_A 268 KKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIP 347 (415)
T ss_dssp SCCEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSC
T ss_pred CCCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCC
Confidence 567 89999432222356666654 699887621 22 11111 1 122 33334444444444 478
Q ss_pred EEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEec
Q 012943 368 VIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (453)
Q Consensus 368 vi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (453)
+|. ..+.-+ ..|+..++..|+|+|++.
T Consensus 348 IIg---------~GGI~s---~eDa~e~l~aGAd~VqIg 374 (415)
T 3i65_A 348 IIA---------SGGIFS---GLDALEKIEAGASVCQLY 374 (415)
T ss_dssp EEE---------CSSCCS---HHHHHHHHHHTEEEEEES
T ss_pred EEE---------ECCCCC---HHHHHHHHHcCCCEEEEc
Confidence 776 344444 467888999999999996
No 115
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=75.30 E-value=27 Score=35.02 Aligned_cols=116 Identities=18% Similarity=0.291 Sum_probs=59.0
Q ss_pred hhhhcCCcEEEec-------cccCHHHHHHHHHHHHhcCCCceEEEE-ecChhhhccHHHHHhh-cCEEEEeCCCccc--
Q 012943 275 FGVDNQVDFYAVS-------FVKDAKVVHELKDYLKSCNADIHVIVK-IESADSIPNLHSIISA-SDGAMVARGDLGA-- 343 (453)
Q Consensus 275 ~a~~~gvd~I~lS-------fV~sa~dv~~v~~~L~~~~~~i~IIak-IET~~gv~NldeI~~~-sDgImIgRGDLg~-- 343 (453)
.+.+.|+|++.+. +.........++.+.+.. +++|+++ |-|++. +....+. +|+|++|+|--+.
T Consensus 173 ~~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~~~--~~pvi~ggi~t~e~---a~~~~~~Gad~i~vg~Gg~~~~~ 247 (393)
T 2qr6_A 173 IVIKAGADLLVIQGTLISAEHVNTGGEALNLKEFIGSL--DVPVIAGGVNDYTT---ALHMMRTGAVGIIVGGGENTNSL 247 (393)
T ss_dssp HHHHTTCSEEEEECSSCCSSCCCC-----CHHHHHHHC--SSCEEEECCCSHHH---HHHHHTTTCSEEEESCCSCCHHH
T ss_pred HHHHCCCCEEEEeCCccccccCCCcccHHHHHHHHHhc--CCCEEECCcCCHHH---HHHHHHcCCCEEEECCCcccccc
Confidence 3346789988764 222111222333333332 5777774 333332 2222223 8999998743111
Q ss_pred --cCCCCCHHHHHHHHHHHH----HHcC---CCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCc
Q 012943 344 --ELPIEDVPLLQEDIIRRC----RSMQ---KPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGE 408 (453)
Q Consensus 344 --elg~e~v~~aqk~Ii~~c----~~aG---kpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~E 408 (453)
..|.+ ......++.+++ .+.+ .|+|.+ .+.-+ -.|+..++..|+|+|++..-
T Consensus 248 ~~~~g~~-~~~~l~~v~~~~~~~~~~~~~~~ipvia~---------GGI~~---~~dv~kalalGA~~V~iG~~ 308 (393)
T 2qr6_A 248 ALGMEVS-MATAIADVAAARRDYLDETGGRYVHIIAD---------GSIEN---SGDVVKAIACGADAVVLGSP 308 (393)
T ss_dssp HTSCCCC-HHHHHHHHHHHHHHHHHHHTSCCCEEEEC---------SSCCS---HHHHHHHHHHTCSEEEECGG
T ss_pred cCCCCCC-hHHHHHHHHHHHHHhHhhcCCcceEEEEE---------CCCCC---HHHHHHHHHcCCCEEEECHH
Confidence 11222 222223333332 2244 777763 33433 46889999999999998643
No 116
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=75.02 E-value=63 Score=31.27 Aligned_cols=158 Identities=15% Similarity=0.113 Sum_probs=99.6
Q ss_pred CCCHhhHHHH-HhhhhcCCcEEEecc-ccCHHHHHHHHHHHHhcCCCceEEEEecC-hhhhccHHHHHhh--cC--EEEE
Q 012943 264 SITDKDWEDI-KFGVDNQVDFYAVSF-VKDAKVVHELKDYLKSCNADIHVIVKIES-ADSIPNLHSIISA--SD--GAMV 336 (453)
Q Consensus 264 ~ltekD~~DI-~~a~~~gvd~I~lSf-V~sa~dv~~v~~~L~~~~~~i~IIakIET-~~gv~NldeI~~~--sD--gImI 336 (453)
.++..++..| +...+.|++.|=+.| ..++.|...++..... ..++.+.+.+-+ ..+++..-+-+.. .| .+++
T Consensus 23 ~~~~~~K~~i~~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~-~~~~~i~~l~~~~~~di~~a~~~~~~ag~~~v~i~~ 101 (293)
T 3ewb_X 23 NFDVKEKIQIALQLEKLGIDVIEAGFPISSPGDFECVKAIAKA-IKHCSVTGLARCVEGDIDRAEEALKDAVSPQIHIFL 101 (293)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEECGGGCHHHHHHHHHHHHH-CCSSEEEEEEESSHHHHHHHHHHHTTCSSEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCCCCccHHHHHHHHHHh-cCCCEEEEEecCCHHHHHHHHHHHhhcCCCEEEEEe
Confidence 3567777555 445678999986654 3466777777665543 456666666643 2344332222111 23 5667
Q ss_pred eCCCcccc----CCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHH-HHHhCccEEEecCcccC
Q 012943 337 ARGDLGAE----LPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI-AVREGADAVMLSGETAH 411 (453)
Q Consensus 337 gRGDLg~e----lg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~n-av~~G~D~vmLs~ETA~ 411 (453)
+-.|+-.. ...++.....+++++.|+++|..|.+... ..+.-+...+.+++. +...|+|.+-| .+|.=
T Consensus 102 ~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~------d~~~~~~~~~~~~~~~~~~~G~~~i~l-~DT~G 174 (293)
T 3ewb_X 102 ATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSPE------DATRSDRAFLIEAVQTAIDAGATVINI-PDTVG 174 (293)
T ss_dssp ECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEEE------TGGGSCHHHHHHHHHHHHHTTCCEEEE-ECSSS
T ss_pred cCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEec------cCCCCCHHHHHHHHHHHHHcCCCEEEe-cCCCC
Confidence 76676432 23355666778899999999999877532 112223333555554 45689999988 58888
Q ss_pred CCCHHHHHHHHHHHHHHH
Q 012943 412 GKFPLKAVKVMHTVALRT 429 (453)
Q Consensus 412 G~yP~eaV~~m~~I~~~a 429 (453)
...|.+.-++++.+..+.
T Consensus 175 ~~~P~~v~~lv~~l~~~~ 192 (293)
T 3ewb_X 175 YTNPTEFGQLFQDLRREI 192 (293)
T ss_dssp CCCHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHhc
Confidence 889999888888876654
No 117
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=74.83 E-value=24 Score=35.86 Aligned_cols=112 Identities=13% Similarity=0.151 Sum_probs=76.0
Q ss_pred HHHHhhhhcCCcEEEeccc-----------cCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhhcCEEEEeCC
Q 012943 271 EDIKFGVDNQVDFYAVSFV-----------KDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARG 339 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lSfV-----------~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~sDgImIgRG 339 (453)
+-++.+.+.|+|+|-...- -..+.+..++++.++. .+.+++-+-.+..++-+ .+.+|.+-||.+
T Consensus 160 ~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~--Gl~~~te~~d~~~~~~l---~~~vd~lkIgs~ 234 (385)
T 3nvt_A 160 AVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEY--GLGVISEIVTPADIEVA---LDYVDVIQIGAR 234 (385)
T ss_dssp HHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH--TCEEEEECCSGGGHHHH---TTTCSEEEECGG
T ss_pred HHHHHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHc--CCEEEEecCCHHHHHHH---HhhCCEEEECcc
Confidence 4456667789998854321 1246677777776654 57788877777776544 455899999977
Q ss_pred CccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHh-CccEEEec
Q 012943 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVRE-GADAVMLS 406 (453)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~-G~D~vmLs 406 (453)
++.- ..+++++.+.||||++.|.| ..|..|+...+..+.. |.+-++|.
T Consensus 235 ~~~n-----------~~LL~~~a~~gkPVilk~G~--------~~t~~e~~~Ave~i~~~Gn~~i~L~ 283 (385)
T 3nvt_A 235 NMQN-----------FELLKAAGRVDKPILLKRGL--------SATIEEFIGAAEYIMSQGNGKIILC 283 (385)
T ss_dssp GTTC-----------HHHHHHHHTSSSCEEEECCT--------TCCHHHHHHHHHHHHTTTCCCEEEE
T ss_pred cccC-----------HHHHHHHHccCCcEEEecCC--------CCCHHHHHHHHHHHHHcCCCeEEEE
Confidence 7642 25666777899999996442 2778888888888764 66545543
No 118
>16pk_A PGK, 3-phosphoglycerate kinase; ternary complex, glycolysis, transferase, bisubstrate, analog; HET: BIS EPE; 1.60A {Trypanosoma brucei} SCOP: c.86.1.1 PDB: 13pk_A*
Probab=74.48 E-value=3.9 Score=42.19 Aligned_cols=208 Identities=12% Similarity=0.134 Sum_probs=117.3
Q ss_pred cEEEEecCCCCCCHHHHHHHHHhCCcEEEeecCCCChH---------------------HHHHHHHHHHHHHhhcCCCcE
Q 012943 101 TKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHA---------------------SHQKTIDLVKEYNSQFEDKAV 159 (453)
Q Consensus 101 TKIi~TiGPss~s~e~i~~Li~aGmnvaRiNfSHg~~e---------------------~~~~~I~~iR~a~~~~~~~~i 159 (453)
|+|-+++ .+|+.|++.|..|.= +||-..- ....+---.+..++.++ ++|
T Consensus 34 ~RI~aal-------pTI~~ll~~Gakvil--~SHlGRPkg~~~~~~~~~~~~~~~~~~~~~~SL~pva~~Ls~lLg-~~V 103 (415)
T 16pk_A 34 YRIRSAL-------PTLKKVLTEGGSCVL--MSHLGRPKGIPMAQAGKIRSTGGVPGFQQKATLKPVAKRLSELLL-RPV 103 (415)
T ss_dssp HHHHHHH-------HHHHHHHHTTCEEEE--ECCCSCCCCBCGGGHHHHHHTTCCTTCCGGGCSHHHHHHHHHHHT-SCC
T ss_pred HHHHHHH-------HHHHHHHHCCCEEEE--EecCCCCCCcccccccccccccccccCCcccCHHHHHHHHHHHhC-CCC
Confidence 5555554 589999999998765 5885421 11111222234445555 899
Q ss_pred EEEeecCCCeeeecCCCCceeecCCCEEEEEeecCCCCccEEEecc----cccccccccCCEEEEeCCeeEEEEEEEeCC
Q 012943 160 AIMLDTKGPEVRSGDVPQPIILKEGQEFNFTIKRGVSTEDTVSVNY----DDFVNDVEVGDILLVDGGMMSLAVKSKTKD 235 (453)
Q Consensus 160 aIllDLkGPkIRtG~l~~~i~L~~G~~v~lt~~~~~~~~~~I~v~~----~~l~~~vk~Gd~IlIDDG~I~L~V~ev~~~ 235 (453)
...=|.-||+.++ -.++.|+.+.|-.-+....+.. |. ++|.+.+..---||+.|.-=
T Consensus 104 ~f~~d~~G~~~~v------~~l~~G~VlLLEN~RF~~~E~~---nd~~e~~~fa~~LA~l~DvyVNDAFg---------- 164 (415)
T 16pk_A 104 TFAPDCLNAADVV------SKMSPGDVVLLENVRFYKEEGS---KKAKDREAMAKILASYGDVYISDAFG---------- 164 (415)
T ss_dssp EEESCTTSCHHHH------HTCCTTCEEEECCGGGBGGGGC---SSHHHHHHHHHHHHTTCSEEEEECGG----------
T ss_pred eeCCccCChHHHh------hcCCCCcEEEeccccCCccccc---CCccccHHHHHHHHhhCCEEEEcccc----------
Confidence 9888999998872 2467888887754433222221 33 56777765544588887321
Q ss_pred eEEEEEeeCcEecccceeecCCCccCCCCCCHhhHHHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCC-ceEE--
Q 012943 236 LVKCIVVDGGELKSRRHLNVRGKSANLPSITDKDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNAD-IHVI-- 312 (453)
Q Consensus 236 ~v~~~V~ngG~L~s~KgVnlp~~~~~lp~ltekD~~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~-i~II-- 312 (453)
...+--+ |-...... ++.. + ..|. =..++..+.+.+..-... +-|+
T Consensus 165 ----------------------taHRaha-S~~Gi~~~---lp~~--~--aG~L-mekEl~~l~k~l~~p~rP~vaIlGG 213 (415)
T 16pk_A 165 ----------------------TAHRDSA-TMTGIPKI---LGNG--A--AGYL-MEKEISYFAKVLGNPPRPLVAIVGG 213 (415)
T ss_dssp ----------------------GTTSCCT-TTTHHHHH---HTCC--E--ECHH-HHHHHHHHHHHHSCCCSSEEEEECS
T ss_pred ----------------------ccccccc-chhhhhhh---cccc--c--ccHH-HHHHHHHHHHHhcCCCCCeEEEEcC
Confidence 1111111 11122111 1111 1 1111 134555555555432222 2233
Q ss_pred EEecChhhhccHHHHHhhcCEEEEeCC-------CccccCCC----CCHHHHHHHHHHHHHHcCCCEEE
Q 012943 313 VKIESADSIPNLHSIISASDGAMVARG-------DLGAELPI----EDVPLLQEDIIRRCRSMQKPVIV 370 (453)
Q Consensus 313 akIET~~gv~NldeI~~~sDgImIgRG-------DLg~elg~----e~v~~aqk~Ii~~c~~aGkpvi~ 370 (453)
||+.+.-++ ++.++.-+|.++||-| =.|.++|- ++....-++++++|++.|..+++
T Consensus 214 aKVsdKi~v--i~nLl~kvD~liiGGgma~tFl~A~G~~iG~Sl~E~d~~~~A~~ll~ka~~~g~~i~l 280 (415)
T 16pk_A 214 AKVSDKIQL--LDNMLQRIDYLLIGGAMAYTFLKAQGYSIGKSKCEESKLEFARSLLKKAEDRKVQVIL 280 (415)
T ss_dssp SCSGGGHHH--HHHHGGGCSEEEECTTHHHHHHHHHTCCCTTCCCCGGGHHHHHHHHHHHHHTTCEEEC
T ss_pred cchhhHHHH--HHHHHHhcCeeEeCcHHHHHHHHHcCCCcCccccChhhHHHHHHHHHHHHhcCCEEEC
Confidence 478887666 7888888999999965 13444442 45556667889999999987654
No 119
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=74.03 E-value=24 Score=33.94 Aligned_cols=108 Identities=18% Similarity=0.224 Sum_probs=68.4
Q ss_pred hHHHHHhh-hhcCCcEEEec-----cccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccH---HHHHhh-cCEEEEeC
Q 012943 269 DWEDIKFG-VDNQVDFYAVS-----FVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNL---HSIISA-SDGAMVAR 338 (453)
Q Consensus 269 D~~DI~~a-~~~gvd~I~lS-----fV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~Nl---deI~~~-sDgImIgR 338 (453)
|..++..+ .+.|+++|.+- |--+.+++..+++.. +++|+.| +.+-+- ++-.+. +|+|.++-
T Consensus 73 ~p~~~A~~y~~~GA~~isvltd~~~f~Gs~~~l~~ir~~v-----~lPvl~k----dfiid~~qv~~A~~~GAD~VlLi~ 143 (272)
T 3qja_A 73 DPAKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASV-----SIPVLRK----DFVVQPYQIHEARAHGADMLLLIV 143 (272)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCGGGHHHHHHHHHHHHHHC-----SSCEEEE----SCCCSHHHHHHHHHTTCSEEEEEG
T ss_pred CHHHHHHHHHHcCCCEEEEecChhhcCCCHHHHHHHHHhC-----CCCEEEC----ccccCHHHHHHHHHcCCCEEEEec
Confidence 44445333 46799988652 223466776666543 5677755 344333 333333 89999987
Q ss_pred CCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecC
Q 012943 339 GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (453)
Q Consensus 339 GDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 407 (453)
.||. +...+.++..|++.|..+++.+ -+..| +..+...|+|.+-.++
T Consensus 144 a~l~--------~~~l~~l~~~a~~lGl~~lvev-----------~t~ee---~~~A~~~Gad~IGv~~ 190 (272)
T 3qja_A 144 AALE--------QSVLVSMLDRTESLGMTALVEV-----------HTEQE---ADRALKAGAKVIGVNA 190 (272)
T ss_dssp GGSC--------HHHHHHHHHHHHHTTCEEEEEE-----------SSHHH---HHHHHHHTCSEEEEES
T ss_pred ccCC--------HHHHHHHHHHHHHCCCcEEEEc-----------CCHHH---HHHHHHCCCCEEEECC
Confidence 7775 2335677888999999988742 13333 4456678999999875
No 120
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=73.29 E-value=70 Score=31.20 Aligned_cols=132 Identities=12% Similarity=0.163 Sum_probs=75.7
Q ss_pred HHhhhhcCCcEEEec-cccCH---HHHHHHHHHHHhcC-CCceEEEEecChhh---------hccHHHHHhh--cCEEEE
Q 012943 273 IKFGVDNQVDFYAVS-FVKDA---KVVHELKDYLKSCN-ADIHVIVKIESADS---------IPNLHSIISA--SDGAMV 336 (453)
Q Consensus 273 I~~a~~~gvd~I~lS-fV~sa---~dv~~v~~~L~~~~-~~i~IIakIET~~g---------v~NldeI~~~--sDgImI 336 (453)
.+.+++.|+|.|.+- |+.+. +.+.++++....+. ..+++| +|++.| +...-.++.. +|.|=.
T Consensus 131 ve~Av~~GAdaV~~~i~~Gs~~~~~~l~~i~~v~~~a~~~GlpvI--ie~~~G~~~~~d~e~i~~aariA~elGAD~VKt 208 (295)
T 3glc_A 131 MDDAVRLNSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKVGMPTM--AVTGVGKDMVRDQRYFSLATRIAAEMGAQIIKT 208 (295)
T ss_dssp HHHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHTTTCCEE--EEECC----CCSHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHCCCCEEEEEEECCCCcHHHHHHHHHHHHHHHHHcCCEEE--EECCCCCccCCCHHHHHHHHHHHHHhCCCEEEe
Confidence 345678899987653 33332 22333334443332 235555 455443 2222233332 576665
Q ss_pred eCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCC-CchHHHHHHHHHHHhCccEEEecCcccCCCCH
Q 012943 337 ARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPT-PTRAEVSDIAIAVREGADAVMLSGETAHGKFP 415 (453)
Q Consensus 337 gRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~-PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP 415 (453)
.. +.+. .+++++ ....||+++ -... +++.-...+..++..|++++......-.-..|
T Consensus 209 ~~-------t~e~----~~~vv~---~~~vPVv~~--------GG~~~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q~~dp 266 (295)
T 3glc_A 209 YY-------VEKG----FERIVA---GCPVPIVIA--------GGKKLPEREALEMCWQAIDQGASGVDMGRNIFQSDHP 266 (295)
T ss_dssp EC-------CTTT----HHHHHH---TCSSCEEEE--------CCSCCCHHHHHHHHHHHHHTTCSEEEESHHHHTSSSH
T ss_pred CC-------CHHH----HHHHHH---hCCCcEEEE--------ECCCCCHHHHHHHHHHHHHhCCeEEEeHHHHhcCcCH
Confidence 41 1122 244443 346898875 2222 22222667789999999999987777777899
Q ss_pred HHHHHHHHHHHHH
Q 012943 416 LKAVKVMHTVALR 428 (453)
Q Consensus 416 ~eaV~~m~~I~~~ 428 (453)
.++++.+..++.+
T Consensus 267 ~~~~~al~~ivh~ 279 (295)
T 3glc_A 267 VAMMKAVQAVVHH 279 (295)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999865
No 121
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=72.40 E-value=83 Score=31.51 Aligned_cols=130 Identities=21% Similarity=0.193 Sum_probs=68.9
Q ss_pred HhhHHHHHhh---hhcCCcEEEecc----------ccCHHHHHHHHHHHHhc------CCCceEEEEecChhhhccHHHH
Q 012943 267 DKDWEDIKFG---VDNQVDFYAVSF----------VKDAKVVHELKDYLKSC------NADIHVIVKIESADSIPNLHSI 327 (453)
Q Consensus 267 ekD~~DI~~a---~~~gvd~I~lSf----------V~sa~dv~~v~~~L~~~------~~~i~IIakIET~~gv~NldeI 327 (453)
+.+.+|...+ +..++|+|-+.+ ..+++.+.++-+.+.+. ..+.+|++||=--...+++.+|
T Consensus 160 ~~~~~dy~~~~~~~~~~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~~~~~~~~i 239 (367)
T 3zwt_A 160 VDAAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDI 239 (367)
T ss_dssp SCHHHHHHHHHHHHGGGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCCCHHHHHHH
T ss_pred CcCHHHHHHHHHHHhhhCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCceEEEEeCCCCCHHHHHHH
Confidence 3345555332 334688887643 23344444443333321 1468999999422222355566
Q ss_pred Hhh-----cCEEEEe-----CCCc-----cccCC-C--CCH-HHHHHHHHHHHHHc--CCCEEEEechhhhhccCCCCch
Q 012943 328 ISA-----SDGAMVA-----RGDL-----GAELP-I--EDV-PLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTR 386 (453)
Q Consensus 328 ~~~-----sDgImIg-----RGDL-----g~elg-~--e~v-~~aqk~Ii~~c~~a--Gkpvi~aTqmLeSM~~~~~Ptr 386 (453)
++. +|+|.+- |-++ +.+.| + ..+ +.....+-+..++. ..|+|.. .+.-|
T Consensus 240 a~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~---------GGI~s- 309 (367)
T 3zwt_A 240 ASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGV---------GGVSS- 309 (367)
T ss_dssp HHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEE---------SSCCS-
T ss_pred HHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEE---------CCCCC-
Confidence 654 7998874 2111 11122 1 123 23333333334444 5788874 44444
Q ss_pred HHHHHHHHHHHhCccEEEecCc
Q 012943 387 AEVSDIAIAVREGADAVMLSGE 408 (453)
Q Consensus 387 AEv~Dv~nav~~G~D~vmLs~E 408 (453)
..|+..++..|+|+||+...
T Consensus 310 --~~da~~~l~~GAd~V~vgra 329 (367)
T 3zwt_A 310 --GQDALEKIRAGASLVQLYTA 329 (367)
T ss_dssp --HHHHHHHHHHTCSEEEESHH
T ss_pred --HHHHHHHHHcCCCEEEECHH
Confidence 45778888899999999743
No 122
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=72.05 E-value=38 Score=32.96 Aligned_cols=133 Identities=11% Similarity=0.100 Sum_probs=81.2
Q ss_pred CCCCCHhhHHHHHhhhhcCCcEEEeccc-------------cCHHHHHHHHHHHHhcCCCceEEEEecCh------hhhc
Q 012943 262 LPSITDKDWEDIKFGVDNQVDFYAVSFV-------------KDAKVVHELKDYLKSCNADIHVIVKIESA------DSIP 322 (453)
Q Consensus 262 lp~ltekD~~DI~~a~~~gvd~I~lSfV-------------~sa~dv~~v~~~L~~~~~~i~IIakIET~------~gv~ 322 (453)
+..+|.+|.---+.+-+.|+|.|.+..- -+-+++..--+.+.+.-++++|++=+++- ++++
T Consensus 31 i~m~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~aV~r~~~~~~vvaD~pfgsY~s~~~a~~ 110 (275)
T 3vav_A 31 IAMLTCYDASFAALLDRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACVARAQPRALIVADLPFGTYGTPADAFA 110 (275)
T ss_dssp EEEEECCSHHHHHHHHHTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHTCCSSEEEEECCTTSCSSHHHHHH
T ss_pred EEEEeCcCHHHHHHHHHcCCCEEEECcHHHHHHcCCCCCCccCHHHHHHHHHHHHhcCCCCCEEEecCCCCCCCHHHHHH
Confidence 3345677776666666789999977521 12223333233344444578999999983 6677
Q ss_pred cHHHHHhh-cCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEe----chhhhh---ccCCC-CchHH--HHH
Q 012943 323 NLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVAT----NMLESM---IDHPT-PTRAE--VSD 391 (453)
Q Consensus 323 NldeI~~~-sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aT----qmLeSM---~~~~~-PtrAE--v~D 391 (453)
|..+++++ +++|-+--|. .+...+++..++|+|++-.. |-...+ ...++ ..+++ +.|
T Consensus 111 ~a~rl~kaGa~aVklEdg~------------~~~~~i~~l~~~GIpv~gHlgltPq~~~~~gg~~vqgrt~~~a~~~i~r 178 (275)
T 3vav_A 111 SAVKLMRAGAQMVKFEGGE------------WLAETVRFLVERAVPVCAHVGLTPQSVHAFGGFKVQGKTEAGAAQLLRD 178 (275)
T ss_dssp HHHHHHHTTCSEEEEECCG------------GGHHHHHHHHHTTCCEEEEEESCGGGHHHHC---CCCCSHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECCch------------hHHHHHHHHHHCCCCEEEecCCCceEEeccCCeEEEcCCHHHHHHHHHH
Confidence 77788776 7899885441 23445566678999987432 111111 11222 22333 677
Q ss_pred HHHHHHhCccEEEec
Q 012943 392 IAIAVREGADAVMLS 406 (453)
Q Consensus 392 v~nav~~G~D~vmLs 406 (453)
.--....|+|+++|=
T Consensus 179 A~a~~eAGA~~ivlE 193 (275)
T 3vav_A 179 ARAVEEAGAQLIVLE 193 (275)
T ss_dssp HHHHHHHTCSEEEEE
T ss_pred HHHHHHcCCCEEEec
Confidence 777788999999994
No 123
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=71.86 E-value=74 Score=31.89 Aligned_cols=128 Identities=16% Similarity=0.266 Sum_probs=83.2
Q ss_pred hHHHHHhhhhcCCcEEEec--------------cc----------------cCHHHHHHHHHHHHhcCCCceEEEEecCh
Q 012943 269 DWEDIKFGVDNQVDFYAVS--------------FV----------------KDAKVVHELKDYLKSCNADIHVIVKIESA 318 (453)
Q Consensus 269 D~~DI~~a~~~gvd~I~lS--------------fV----------------~sa~dv~~v~~~L~~~~~~i~IIakIET~ 318 (453)
-++-++.+.+.|+|.|=.- |- -+.+++..++++.++. .+.+++-+=..
T Consensus 37 a~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e~~~~L~~~~~~~--Gi~~~st~~d~ 114 (349)
T 2wqp_A 37 AFEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVESK--GMIFISTLFSR 114 (349)
T ss_dssp HHHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHHHHHHHHHHHHHT--TCEEEEEECSH
T ss_pred HHHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhCCCHHHHHHHHHHHHHh--CCeEEEeeCCH
Confidence 3455677778899987542 21 1234555566666553 56777766666
Q ss_pred hhhccHHHHHhh-cCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHH
Q 012943 319 DSIPNLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVR 397 (453)
Q Consensus 319 ~gv~NldeI~~~-sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~ 397 (453)
++++-+++ . .|.+=||-+|+. .++ +++++.+.|||+++.|. .-|.+|+...+..+.
T Consensus 115 ~svd~l~~---~~v~~~KI~S~~~~------n~~-----LL~~va~~gkPviLstG---------mat~~Ei~~Ave~i~ 171 (349)
T 2wqp_A 115 AAALRLQR---MDIPAYKIGSGECN------NYP-----LIKLVASFGKPIILSTG---------MNSIESIKKSVEIIR 171 (349)
T ss_dssp HHHHHHHH---HTCSCEEECGGGTT------CHH-----HHHHHHTTCSCEEEECT---------TCCHHHHHHHHHHHH
T ss_pred HHHHHHHh---cCCCEEEECccccc------CHH-----HHHHHHhcCCeEEEECC---------CCCHHHHHHHHHHHH
Confidence 66655544 4 699999988774 333 35556678999999765 347789888888887
Q ss_pred -hCccEEEecCcccCCCCHH-------HHHHHHHH
Q 012943 398 -EGADAVMLSGETAHGKFPL-------KAVKVMHT 424 (453)
Q Consensus 398 -~G~D~vmLs~ETA~G~yP~-------eaV~~m~~ 424 (453)
.|.+.++|-. +-.||. .+|.+|++
T Consensus 172 ~~G~~iiLlhc---~s~Yp~~~~~~nL~ai~~lk~ 203 (349)
T 2wqp_A 172 EAGVPYALLHC---TNIYPTPYEDVRLGGMNDLSE 203 (349)
T ss_dssp HHTCCEEEEEC---CCCSSCCGGGCCTHHHHHHHH
T ss_pred HcCCCEEEEec---cCCCCCChhhcCHHHHHHHHH
Confidence 4667777732 334765 55555544
No 124
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=71.31 E-value=63 Score=29.65 Aligned_cols=120 Identities=16% Similarity=0.131 Sum_probs=67.2
Q ss_pred HHHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhhcCEEE-Ee-C-CCccccCC
Q 012943 270 WEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAM-VA-R-GDLGAELP 346 (453)
Q Consensus 270 ~~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~sDgIm-Ig-R-GDLg~elg 346 (453)
.+.++.+.+.|+|+|.++.. ..++...+.+++++.+.. ++..+......+.+..+...+|+++ +. . |-.+..-+
T Consensus 98 ~~~~~~~~~~Gad~v~~~~~-~~~~~~~~~~~~~~~g~~--~~~~i~~~t~~e~~~~~~~~~d~~i~~~~~~G~~g~~~~ 174 (248)
T 1geq_A 98 RNFLAEAKASGVDGILVVDL-PVFHAKEFTEIAREEGIK--TVFLAAPNTPDERLKVIDDMTTGFVYLVSLYGTTGAREE 174 (248)
T ss_dssp HHHHHHHHHHTCCEEEETTC-CGGGHHHHHHHHHHHTCE--EEEEECTTCCHHHHHHHHHHCSSEEEEECCC-------C
T ss_pred HHHHHHHHHCCCCEEEECCC-ChhhHHHHHHHHHHhCCC--eEEEECCCCHHHHHHHHHhcCCCeEEEEECCccCCCCCC
Confidence 35677778899999999743 456777777777776654 3444443334455666766677432 32 1 21222111
Q ss_pred CCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEec
Q 012943 347 IEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (453)
Q Consensus 347 ~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (453)
.. +...+.+-+.....+.|++.. .+.-+ ..++..+...|+|++.+.
T Consensus 175 ~~--~~~~~~i~~l~~~~~~pi~~~---------GGI~~---~e~i~~~~~~Gad~vivG 220 (248)
T 1geq_A 175 IP--KTAYDLLRRAKRICRNKVAVG---------FGVSK---REHVVSLLKEGANGVVVG 220 (248)
T ss_dssp CC--HHHHHHHHHHHHHCSSCEEEE---------SCCCS---HHHHHHHHHTTCSEEEEC
T ss_pred CC--hhHHHHHHHHHhhcCCCEEEE---------eecCC---HHHHHHHHHcCCCEEEEc
Confidence 11 222233333334447888774 33333 235556677899999975
No 125
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=71.21 E-value=7.6 Score=40.71 Aligned_cols=51 Identities=20% Similarity=0.362 Sum_probs=43.2
Q ss_pred CcEEEEecCCCCCCHHHHHHHHHhCCcEEEeecCCCChHHHHHHHHHHHHH
Q 012943 100 KTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEY 150 (453)
Q Consensus 100 ~TKIi~TiGPss~s~e~i~~Li~aGmnvaRiNfSHg~~e~~~~~I~~iR~a 150 (453)
+-.+-+.+|...++.+.++.|+++|+++.=||++||..+.+.++++.+|+.
T Consensus 219 rL~v~aavG~~~d~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~ 269 (496)
T 4fxs_A 219 RLRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAA 269 (496)
T ss_dssp CBCCEEECCSSSCCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHH
T ss_pred ceeeeeeeccccchHHHHHHHHhccCceEEeccccccchHHHHHHHHHHHH
Confidence 455677888888899999999999999999999999887777777776653
No 126
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=70.58 E-value=9.8 Score=36.14 Aligned_cols=148 Identities=17% Similarity=0.106 Sum_probs=87.4
Q ss_pred CCCCHhhHHHH-HhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh--------cCE
Q 012943 263 PSITDKDWEDI-KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA--------SDG 333 (453)
Q Consensus 263 p~ltekD~~DI-~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~--------sDg 333 (453)
|..|..|.+.+ +.+.++|+..|+++ +..+..++ +| .+..+.|.+-|=-|.|-...+.-+.. +|.
T Consensus 24 p~~t~~~i~~lc~eA~~~~~~aVcV~----p~~v~~a~-~l--~~~~v~v~tVigFP~G~~~~~~K~~E~~~Ai~~GAdE 96 (231)
T 3ndo_A 24 PEATPSDVTALVDEAADLGVFAVCVS----PPLVSVAA-GV--APSGLAIAAVAGFPSGKHVPGIKATEAELAVAAGATE 96 (231)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHH-HH--CCTTCEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHHHHHHHHHhCCcEEEEC----HHHHHHHH-Hh--cCCCCeEEEEecCCCCCCcHHHHHHHHHHHHHcCCCE
Confidence 67788888665 77889999999885 55666666 66 35678888878666666544433321 343
Q ss_pred EEEeCCCccccCCC---CCHHHH---HHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHH-HHHhCccEEEec
Q 012943 334 AMVARGDLGAELPI---EDVPLL---QEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI-AVREGADAVMLS 406 (453)
Q Consensus 334 ImIgRGDLg~elg~---e~v~~a---qk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~n-av~~G~D~vmLs 406 (453)
|=+ -+.+|. .+.... .+.+.++|...-..||+-|-.|+. ..|..|+..... +...|+|.|=-|
T Consensus 97 IDm-----Vinig~lk~g~~~~v~~ei~~v~~a~~~~~lKvIiEt~~L~~-----~~t~eei~~a~~ia~~aGADfVKTS 166 (231)
T 3ndo_A 97 IDM-----VIDVGAALAGDLDAVSADITAVRKAVRAATLKVIVESAALLE-----FSGEPLLADVCRVARDAGADFVKTS 166 (231)
T ss_dssp EEE-----ECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCHHHHHH-----HTCHHHHHHHHHHHHHTTCSEEECC
T ss_pred EEE-----EeehHhhhcccHHHHHHHHHHHHHHccCCceEEEEECcccCC-----CCCHHHHHHHHHHHHHHCcCEEEcC
Confidence 321 222332 233333 445555554222235666665521 236667666655 446799999766
Q ss_pred Cccc-CCCCHHHHHHHHHHHHH
Q 012943 407 GETA-HGKFPLKAVKVMHTVAL 427 (453)
Q Consensus 407 ~ETA-~G~yP~eaV~~m~~I~~ 427 (453)
.-=. .|-=-++.|+.|++.+.
T Consensus 167 TGf~~~~gAt~edv~lm~~~v~ 188 (231)
T 3ndo_A 167 TGFHPSGGASVQAVEIMARTVG 188 (231)
T ss_dssp CSCCTTCSCCHHHHHHHHHHHT
T ss_pred CCCCCCCCCCHHHHHHHHHHhC
Confidence 3211 22223689999999863
No 127
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=70.28 E-value=75 Score=30.11 Aligned_cols=132 Identities=19% Similarity=0.252 Sum_probs=68.1
Q ss_pred HhhHHHHH-hhhh-cCCcEEEeccc------------cCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHh---
Q 012943 267 DKDWEDIK-FGVD-NQVDFYAVSFV------------KDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIIS--- 329 (453)
Q Consensus 267 ekD~~DI~-~a~~-~gvd~I~lSfV------------~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~--- 329 (453)
..+..... .+.+ .|+|+|-+.|- .+++.+.++-+.+.+. -+.+|++|+= + ++.++.+++.
T Consensus 110 ~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~-~~~pv~vk~~-~-~~~~~~~~a~~l~ 186 (311)
T 1ep3_A 110 EADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAV-SKVPLYVKLS-P-NVTDIVPIAKAVE 186 (311)
T ss_dssp HHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHH-CSSCEEEEEC-S-CSSCSHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHh-cCCCEEEEEC-C-ChHHHHHHHHHHH
Confidence 34444443 3344 89999866442 2344444444444432 1477888874 1 2334444433
Q ss_pred -h-cCEEEEeCC------Ccccc-----------CCCCCHHHHHHHHHHHHH-HcCCCEEEEechhhhhccCCCCchHHH
Q 012943 330 -A-SDGAMVARG------DLGAE-----------LPIEDVPLLQEDIIRRCR-SMQKPVIVATNMLESMIDHPTPTRAEV 389 (453)
Q Consensus 330 -~-sDgImIgRG------DLg~e-----------lg~e~v~~aqk~Ii~~c~-~aGkpvi~aTqmLeSM~~~~~PtrAEv 389 (453)
. +|+|.+.-. |.... -|....+. .-..+...+ ....|++.+ .+.-+ .
T Consensus 187 ~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~-~~~~i~~i~~~~~ipvia~---------GGI~~---~ 253 (311)
T 1ep3_A 187 AAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPV-ALKLIHQVAQDVDIPIIGM---------GGVAN---A 253 (311)
T ss_dssp HTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHH-HHHHHHHHHTTCSSCEEEC---------SSCCS---H
T ss_pred HcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHH-HHHHHHHHHHhcCCCEEEE---------CCcCC---H
Confidence 2 799988321 11000 01111222 223343333 347888873 33334 3
Q ss_pred HHHHHHHHhCccEEEecCcccCCCC
Q 012943 390 SDIAIAVREGADAVMLSGETAHGKF 414 (453)
Q Consensus 390 ~Dv~nav~~G~D~vmLs~ETA~G~y 414 (453)
.|+..++..|+|+|++..---.|..
T Consensus 254 ~d~~~~l~~GAd~V~vg~~~l~~p~ 278 (311)
T 1ep3_A 254 QDVLEMYMAGASAVAVGTANFADPF 278 (311)
T ss_dssp HHHHHHHHHTCSEEEECTHHHHCTT
T ss_pred HHHHHHHHcCCCEEEECHHHHcCcH
Confidence 4677888899999999755444443
No 128
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=70.05 E-value=8.3 Score=35.69 Aligned_cols=125 Identities=11% Similarity=0.135 Sum_probs=62.2
Q ss_pred HHHhhhhcCCcEEEe-----ccccCHHHHHHHHHHHHhcCCCceEEE--EecChhhhccHHHHHhh-cCEEEEeCCCccc
Q 012943 272 DIKFGVDNQVDFYAV-----SFVKDAKVVHELKDYLKSCNADIHVIV--KIESADSIPNLHSIISA-SDGAMVARGDLGA 343 (453)
Q Consensus 272 DI~~a~~~gvd~I~l-----SfV~sa~dv~~v~~~L~~~~~~i~IIa--kIET~~gv~NldeI~~~-sDgImIgRGDLg~ 343 (453)
..+...+.|+|+|-+ .|...... ..+++..+.. ++++++ .|.+++ .+++.++. +|++.+++..|.-
T Consensus 37 ~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~--~ipv~v~ggI~~~~---~~~~~l~~Gad~V~lg~~~l~~ 110 (244)
T 1vzw_A 37 AALAWQRSGAEWLHLVDLDAAFGTGDNR-ALIAEVAQAM--DIKVELSGGIRDDD---TLAAALATGCTRVNLGTAALET 110 (244)
T ss_dssp HHHHHHHTTCSEEEEEEHHHHHTSCCCH-HHHHHHHHHC--SSEEEEESSCCSHH---HHHHHHHTTCSEEEECHHHHHC
T ss_pred HHHHHHHcCCCEEEEecCchhhcCCChH-HHHHHHHHhc--CCcEEEECCcCCHH---HHHHHHHcCCCEEEECchHhhC
Confidence 335556789999876 34444444 3344433332 566666 366654 35555655 8999998765531
Q ss_pred cCCCCCHHHHHHHHHHHHHHcCCCEEEEechhh-hh-ccCC---CCchHHHHHHHHHHHhCccEEEecCcccCCCC
Q 012943 344 ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLE-SM-IDHP---TPTRAEVSDIAIAVREGADAVMLSGETAHGKF 414 (453)
Q Consensus 344 elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLe-SM-~~~~---~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~y 414 (453)
+ ..+.+..+..|..++++-.... .. ++.- .++. ...+..+...|+|.+++++-+.-|.+
T Consensus 111 -------p---~~~~~~~~~~g~~~~~~l~~~~g~v~~~g~~~~~~~~--~e~~~~~~~~G~~~i~~~~~~~~~~~ 174 (244)
T 1vzw_A 111 -------P---EWVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRDGGDL--YETLDRLNKEGCARYVVTDIAKDGTL 174 (244)
T ss_dssp -------H---HHHHHHHHHHGGGEEEEEEEETTEECCSSSCCCCCBH--HHHHHHHHHTTCCCEEEEEC------
T ss_pred -------H---HHHHHHHHHcCCcEEEEEEccCCEEEEcCcccCCCCH--HHHHHHHHhCCCCEEEEeccCccccc
Confidence 1 2333334445544444322110 00 1110 0122 22344566789999998765554543
No 129
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=69.69 E-value=36 Score=34.23 Aligned_cols=59 Identities=19% Similarity=0.318 Sum_probs=40.2
Q ss_pred cCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHh-CccEEEecCcc
Q 012943 331 SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVRE-GADAVMLSGET 409 (453)
Q Consensus 331 sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~-G~D~vmLs~ET 409 (453)
+|.+=||-+|+. .++ +++.+.+.|||+|+.|.| -|..|+...++.+.. |.+.++|--++
T Consensus 112 v~~~KI~S~~~~------N~p-----LL~~va~~gKPviLstGm---------stl~Ei~~Ave~i~~~g~~viLlhC~s 171 (350)
T 3g8r_A 112 IEIIKIASCSFT------DWP-----LLERIARSDKPVVASTAG---------ARREDIDKVVSFMLHRGKDLTIMHCVA 171 (350)
T ss_dssp CCEEEECSSSTT------CHH-----HHHHHHTSCSCEEEECTT---------CCHHHHHHHHHHHHTTTCCEEEEECCC
T ss_pred CCEEEECccccc------CHH-----HHHHHHhhCCcEEEECCC---------CCHHHHHHHHHHHHHcCCCEEEEecCC
Confidence 788888877763 333 344555789999997653 477888888887764 66766665444
No 130
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=68.90 E-value=72 Score=32.90 Aligned_cols=119 Identities=23% Similarity=0.254 Sum_probs=70.5
Q ss_pred HHHHHhhhhcCCcEEEeccc--cCHHHHHHHHHHHHhcCCCceEEE-EecChhhhccHHHHHhhcCEEEEeCCCcc----
Q 012943 270 WEDIKFGVDNQVDFYAVSFV--KDAKVVHELKDYLKSCNADIHVIV-KIESADSIPNLHSIISASDGAMVARGDLG---- 342 (453)
Q Consensus 270 ~~DI~~a~~~gvd~I~lSfV--~sa~dv~~v~~~L~~~~~~i~IIa-kIET~~gv~NldeI~~~sDgImIgRGDLg---- 342 (453)
.+.+.+..+.|+|.+.+.-. .+..-+..++. +.+.- .+++|+ .|-|+++...+. -+|++.+|.|-=+
T Consensus 230 ~~~a~~l~~~gvd~lvvdta~G~~~~~L~~I~~-l~~~~-~vpvi~k~v~~~~~a~~l~----G~d~v~vg~g~g~~~~~ 303 (486)
T 2cu0_A 230 IKRAIELDKAGVDVIVVDTAHAHNLKAIKSMKE-MRQKV-DADFIVGNIANPKAVDDLT----FADAVKVGIGPGSICTT 303 (486)
T ss_dssp HHHHHHHHHTTCSEEEEECSCCCCHHHHHHHHH-HHHTC-CSEEEEEEECCHHHHTTCT----TSSEEEECSSCSTTBCH
T ss_pred HHHHHHHHHhcCCceEEEecCCcEeehhhHHHH-HHHHh-CCccccCCcCCHHHHHHhh----CCCeEEEeeeeccceee
Confidence 45566777899998765421 22223333333 33322 677777 477777665443 6899998543211
Q ss_pred ---ccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecC
Q 012943 343 ---AELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (453)
Q Consensus 343 ---~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 407 (453)
...|.+.+ .....+.+.+.+.+.|||.+ .+.-+ -.|++.++..|||++|+..
T Consensus 304 r~~~~~g~~~~-~~l~~~~~~~~~~~vpVia~---------GGi~~---~~di~kalalGA~~v~~g~ 358 (486)
T 2cu0_A 304 RIVAGVGVPQI-TAVAMVADRAQEYGLYVIAD---------GGIRY---SGDIVKAIAAGADAVMLGN 358 (486)
T ss_dssp HHHTCCCCCHH-HHHHHHHHHHHHHTCEEEEE---------SCCCS---HHHHHHHHHTTCSEEEEST
T ss_pred eEEeecCcchH-HHHHHHHHHHHHcCCcEEec---------CCCCC---HHHHHHHHHcCCCceeeCh
Confidence 11233322 33344455566668998875 33444 4678899999999999854
No 131
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=68.82 E-value=39 Score=32.09 Aligned_cols=129 Identities=9% Similarity=0.083 Sum_probs=72.0
Q ss_pred HHHhhhhcCCcEEEeccc-cCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh-cCEEEEeCCCccccCCCCC
Q 012943 272 DIKFGVDNQVDFYAVSFV-KDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIED 349 (453)
Q Consensus 272 DI~~a~~~gvd~I~lSfV-~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~-sDgImIgRGDLg~elg~e~ 349 (453)
++..+...|+|+|.+.-. -+ ++++++-++..+.| +.+++-+-+.+-+ +..+.. .|.|-++.-||. .++. .
T Consensus 120 qi~~a~~~GAD~VlL~~~~l~-~~l~~l~~~a~~lG--l~~lvev~~~~E~---~~a~~~gad~IGvn~~~l~-~~~~-d 191 (254)
T 1vc4_A 120 MLEEARAFGASAALLIVALLG-ELTGAYLEEARRLG--LEALVEVHTEREL---EIALEAGAEVLGINNRDLA-TLHI-N 191 (254)
T ss_dssp HHHHHHHTTCSEEEEEHHHHG-GGHHHHHHHHHHHT--CEEEEEECSHHHH---HHHHHHTCSEEEEESBCTT-TCCB-C
T ss_pred HHHHHHHcCCCEEEECccchH-HHHHHHHHHHHHCC--CeEEEEECCHHHH---HHHHHcCCCEEEEccccCc-CCCC-C
Confidence 456677899999987421 11 34443333322444 3333334443322 222222 688888877764 2222 1
Q ss_pred HHHHHHHHHHHHHHc--CCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccCCCCHHHHHHHH
Q 012943 350 VPLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVM 422 (453)
Q Consensus 350 v~~aqk~Ii~~c~~a--Gkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m 422 (453)
+ ..-+++....... ++|++. .++.-|. .|+..... |+|+++...---.+..|.++++-|
T Consensus 192 l-~~~~~L~~~i~~~~~~~~vIA---------egGI~s~---~dv~~l~~-Ga~gvlVGsAl~~~~d~~~~~~~l 252 (254)
T 1vc4_A 192 L-ETAPRLGRLARKRGFGGVLVA---------ESGYSRK---EELKALEG-LFDAVLIGTSLMRAPDLEAALREL 252 (254)
T ss_dssp T-THHHHHHHHHHHTTCCSEEEE---------ESCCCSH---HHHHTTTT-TCSEEEECHHHHTSSCHHHHHHHH
T ss_pred H-HHHHHHHHhCccccCCCeEEE---------EcCCCCH---HHHHHHHc-CCCEEEEeHHHcCCCCHHHHHHHH
Confidence 1 1122333333333 566554 4566664 45667778 999999976666788899988766
No 132
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=68.46 E-value=24 Score=32.01 Aligned_cols=127 Identities=17% Similarity=0.151 Sum_probs=68.2
Q ss_pred HHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhh----hccHHHHHhh-----cCEEEEeCCCc
Q 012943 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADS----IPNLHSIISA-----SDGAMVARGDL 341 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~g----v~NldeI~~~-----sDgImIgRGDL 341 (453)
..++.+.+.|+|+|.+...-..+-++.+ .+.+ .+.+.+..-+... .+.++.++.. .||+.+.+.
T Consensus 69 ~~v~~~~~~Gad~vtvh~~~g~~~i~~~----~~~~-gv~vl~~t~~~~~~~~~~~~v~~~~~~a~~~G~~G~~~~~~-- 141 (208)
T 2czd_A 69 LIARKVFGAGADYVIVHTFVGRDSVMAV----KELG-EIIMVVEMSHPGALEFINPLTDRFIEVANEIEPFGVIAPGT-- 141 (208)
T ss_dssp HHHHHHHHTTCSEEEEESTTCHHHHHHH----HTTS-EEEEECCCCSGGGGTTTGGGHHHHHHHHHHHCCSEEECCCS--
T ss_pred HHHHHHHhcCCCEEEEeccCCHHHHHHH----HHhC-CcEEEEecCCcchhhHHHHHHHHHHHHHHHhCCcEEEECCC--
Confidence 4455566899999988765444433333 2333 3444443322111 3445555443 477766422
Q ss_pred cccCCCCCHHHHHHHHHHHHHHcC-CCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccCCCCHHHHHH
Q 012943 342 GAELPIEDVPLLQEDIIRRCRSMQ-KPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVK 420 (453)
Q Consensus 342 g~elg~e~v~~aqk~Ii~~c~~aG-kpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~ 420 (453)
..+++.. +-+.+ + .++++. -...+. -.++..++..|+|.+....--....-|.++++
T Consensus 142 ----~~~~i~~----lr~~~---~~~~~iv~--------gGI~~~---g~~~~~~~~aGad~vvvGr~I~~a~dp~~~~~ 199 (208)
T 2czd_A 142 ----RPERIGY----IRDRL---KEGIKILA--------PGIGAQ---GGKAKDAVKAGADYIIVGRAIYNAPNPREAAK 199 (208)
T ss_dssp ----STHHHHH----HHHHS---CTTCEEEE--------CCCCSS---TTHHHHHHHHTCSEEEECHHHHTSSSHHHHHH
T ss_pred ----ChHHHHH----HHHhC---CCCeEEEE--------CCCCCC---CCCHHHHHHcCCCEEEEChHHhcCCCHHHHHH
Confidence 1223322 22222 4 355543 122232 12366777889999998755555567999999
Q ss_pred HHHHHH
Q 012943 421 VMHTVA 426 (453)
Q Consensus 421 ~m~~I~ 426 (453)
.+++.+
T Consensus 200 ~l~~~i 205 (208)
T 2czd_A 200 AIYDEI 205 (208)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887654
No 133
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=68.43 E-value=57 Score=29.24 Aligned_cols=125 Identities=8% Similarity=-0.008 Sum_probs=69.2
Q ss_pred HHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh----cCEEEEeCCCccccCC
Q 012943 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA----SDGAMVARGDLGAELP 346 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~----sDgImIgRGDLg~elg 346 (453)
++++.+++.|+|+|.++. ... ++ .+...+.+. .+++-+.| .+|+..+ +|.+.+-+++ ..|
T Consensus 71 ~~i~~a~~~Gad~V~~~~-~~~-~~---~~~~~~~g~--~~~~g~~t------~~e~~~a~~~G~d~v~v~~t~---~~g 134 (212)
T 2v82_A 71 EQVDALARMGCQLIVTPN-IHS-EV---IRRAVGYGM--TVCPGCAT------ATEAFTALEAGAQALKIFPSS---AFG 134 (212)
T ss_dssp HHHHHHHHTTCCEEECSS-CCH-HH---HHHHHHTTC--EEECEECS------HHHHHHHHHTTCSEEEETTHH---HHC
T ss_pred HHHHHHHHcCCCEEEeCC-CCH-HH---HHHHHHcCC--CEEeecCC------HHHHHHHHHCCCCEEEEecCC---CCC
Confidence 467778889999997553 222 22 233444443 33333444 4444332 7888874332 112
Q ss_pred CCCHHHHHHHHHHHHHHcC--CCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccCC----CCHHHHHH
Q 012943 347 IEDVPLLQEDIIRRCRSMQ--KPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHG----KFPLKAVK 420 (453)
Q Consensus 347 ~e~v~~aqk~Ii~~c~~aG--kpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G----~yP~eaV~ 420 (453)
+ ..+-+.+.... .|++.. .+. +. .++..+...|+|++.+.+--..+ .-|.++++
T Consensus 135 ~-------~~~~~l~~~~~~~ipvia~---------GGI-~~---~~i~~~~~~Ga~gv~vGsai~~~~~~~~d~~~~~~ 194 (212)
T 2v82_A 135 P-------QYIKALKAVLPSDIAVFAV---------GGV-TP---ENLAQWIDAGCAGAGLGSDLYRAGQSVERTAQQAA 194 (212)
T ss_dssp H-------HHHHHHHTTSCTTCEEEEE---------SSC-CT---TTHHHHHHHTCSEEEECTTTCCTTCCHHHHHHHHH
T ss_pred H-------HHHHHHHHhccCCCeEEEe---------CCC-CH---HHHHHHHHcCCCEEEEChHHhCCCCCHHHHHHHHH
Confidence 1 22222233333 777764 222 22 24556677899999976443333 35889999
Q ss_pred HHHHHHHHHhc
Q 012943 421 VMHTVALRTES 431 (453)
Q Consensus 421 ~m~~I~~~aE~ 431 (453)
.+.+++.++-.
T Consensus 195 ~l~~~~~~~~~ 205 (212)
T 2v82_A 195 AFVKAYREAVQ 205 (212)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99888877654
No 134
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=68.39 E-value=47 Score=30.98 Aligned_cols=114 Identities=10% Similarity=0.032 Sum_probs=71.0
Q ss_pred CCCCHhhHHHHHhh-hhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEe-cChh--------hhccHHHHHhh-c
Q 012943 263 PSITDKDWEDIKFG-VDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKI-ESAD--------SIPNLHSIISA-S 331 (453)
Q Consensus 263 p~ltekD~~DI~~a-~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakI-ET~~--------gv~NldeI~~~-s 331 (453)
|--++.+...+..+ ...|+.+|.+ .+.++++++++.. +++|+..+ +... -++.+++..++ +
T Consensus 31 pl~~~~~~~~~A~a~~~~Ga~~i~~---~~~~~i~~ir~~v-----~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGa 102 (229)
T 3q58_A 31 PMDKPEIVAAMAQAAASAGAVAVRI---EGIENLRTVRPHL-----SVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGA 102 (229)
T ss_dssp TTCSHHHHHHHHHHHHHTTCSEEEE---ESHHHHHHHGGGC-----CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTC
T ss_pred CCCCcchHHHHHHHHHHCCCcEEEE---CCHHHHHHHHHhc-----CCCEEEEEeecCCCCceEeCccHHHHHHHHHcCC
Confidence 34456677777554 5678998865 5788888887654 46666532 1111 12345666655 8
Q ss_pred CEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEe
Q 012943 332 DGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVML 405 (453)
Q Consensus 332 DgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmL 405 (453)
|.|.+.-..+ ...+ ..+++++.+++.|.+++.- ..|..| .-.+...|+|.+-.
T Consensus 103 d~I~l~~~~~---~~p~----~l~~~i~~~~~~g~~v~~~-----------v~t~ee---a~~a~~~Gad~Ig~ 155 (229)
T 3q58_A 103 DIIAFDASFR---SRPV----DIDSLLTRIRLHGLLAMAD-----------CSTVNE---GISCHQKGIEFIGT 155 (229)
T ss_dssp SEEEEECCSS---CCSS----CHHHHHHHHHHTTCEEEEE-----------CSSHHH---HHHHHHTTCSEEEC
T ss_pred CEEEECcccc---CChH----HHHHHHHHHHHCCCEEEEe-----------cCCHHH---HHHHHhCCCCEEEe
Confidence 9988864432 1112 3466777888889988863 223333 45778899999963
No 135
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=67.78 E-value=9.4 Score=37.37 Aligned_cols=150 Identities=11% Similarity=0.050 Sum_probs=85.3
Q ss_pred CCCCCHhhHHHH-Hhhhhc--CCcEEEeccccCHHHHHHHHHHHHhcCC--CceEEEEecChhhhccHHHHHhh------
Q 012943 262 LPSITDKDWEDI-KFGVDN--QVDFYAVSFVKDAKVVHELKDYLKSCNA--DIHVIVKIESADSIPNLHSIISA------ 330 (453)
Q Consensus 262 lp~ltekD~~DI-~~a~~~--gvd~I~lSfV~sa~dv~~v~~~L~~~~~--~i~IIakIET~~gv~NldeI~~~------ 330 (453)
-|.-|+.|.+.+ +.+.+. +++.|+++ +..+..++++|...+. .++|.+-|==|.|-.+.+..+..
T Consensus 42 ~p~~T~~dI~~lc~eA~~~~~~~aaVCV~----p~~V~~a~~~L~~~gs~~~v~v~tVigFP~G~~~~~~Kv~E~~~Av~ 117 (281)
T 2a4a_A 42 DENGTEDDIRELCNESVKTCPFAAAVCVY----PKFVKFINEKIKQEINPFKPKIACVINFPYGTDSMEKVLNDTEKALD 117 (281)
T ss_dssp CTTCCHHHHHHHHHHHHSSSSCCSEEEEC----GGGHHHHHHHHHHHSSSCCSEEEEEESTTTCCSCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhccCCccEEEEC----HHHHHHHHHHhhccCCCCCceEEEEeCCCCCCCCHHHHHHHHHHHHH
Confidence 366688887655 667788 99999875 5567777888864344 67887777444444444422221
Q ss_pred --cCEEEEeCCCccccCCC---CCHH---HHHHHHHHHHHHc-CCC--EEEEechhhhhccCCCCchHH-HHH-HHHHHH
Q 012943 331 --SDGAMVARGDLGAELPI---EDVP---LLQEDIIRRCRSM-QKP--VIVATNMLESMIDHPTPTRAE-VSD-IAIAVR 397 (453)
Q Consensus 331 --sDgImIgRGDLg~elg~---e~v~---~aqk~Ii~~c~~a-Gkp--vi~aTqmLeSM~~~~~PtrAE-v~D-v~nav~ 397 (453)
+|.|-+ .+.+|. .+.. .+.+.|.....+. ++| ||+.|-.| +..| +.. .--+..
T Consensus 118 ~GAdEIDm-----Vinig~lksg~~~~~~~v~~eI~~v~~a~~~~~lKVIlEt~~L---------~d~e~i~~A~~ia~e 183 (281)
T 2a4a_A 118 DGADEIDL-----VINYKKIIENTDEGLKEATKLTQSVKKLLTNKILKVIIEVGEL---------KTEDLIIKTTLAVLN 183 (281)
T ss_dssp HTCSEEEE-----ECCHHHHHHSHHHHHHHHHHHHHHHHTTCTTSEEEEECCHHHH---------CSHHHHHHHHHHHHT
T ss_pred cCCCEEEE-----ecchHhhhCCChhHHHHHHHHHHHHHHHhcCCceEEEEecccC---------CcHHHHHHHHHHHHH
Confidence 454422 112221 1122 3334443333333 345 47766555 4445 322 334567
Q ss_pred hCccEEEecCcccCCCCHHHHHHHHHHHHHHH
Q 012943 398 EGADAVMLSGETAHGKFPLKAVKVMHTVALRT 429 (453)
Q Consensus 398 ~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~a 429 (453)
.|+|.|=-|..=..|.=-++.|+.|++.+++.
T Consensus 184 aGADfVKTSTGf~~~gAT~edv~lm~~~v~~~ 215 (281)
T 2a4a_A 184 GNADFIKTSTGKVQINATPSSVEYIIKAIKEY 215 (281)
T ss_dssp TTCSEEECCCSCSSCCCCHHHHHHHHHHHHHH
T ss_pred hCCCEEEeCCCCCCCCCCHHHHHHHHHHHHHh
Confidence 89999876632222233468999999998754
No 136
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=67.78 E-value=72 Score=28.97 Aligned_cols=112 Identities=22% Similarity=0.229 Sum_probs=64.0
Q ss_pred HHHHHhhhhcCCcEEEec-----cccC----HHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh-cCEEEEeCC
Q 012943 270 WEDIKFGVDNQVDFYAVS-----FVKD----AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARG 339 (453)
Q Consensus 270 ~~DI~~a~~~gvd~I~lS-----fV~s----a~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~-sDgImIgRG 339 (453)
.++++.+.+.|+|+|-+- |+.+ .+.++++++. .+..+.+..++..++ +.++..+++ +|++.+.-.
T Consensus 26 ~~~i~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~---~~~~~~v~l~vnd~~--~~v~~~~~~Gad~v~vh~~ 100 (230)
T 1rpx_A 26 GEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPI---TDLPLDVHLMIVEPD--QRVPDFIKAGADIVSVHCE 100 (230)
T ss_dssp HHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGG---CCSCEEEEEESSSHH--HHHHHHHHTTCSEEEEECS
T ss_pred HHHHHHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhc---cCCcEEEEEEecCHH--HHHHHHHHcCCCEEEEEec
Confidence 456777788899988774 4443 3344333332 233455667777743 345656555 899988622
Q ss_pred CccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEec
Q 012943 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (453)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (453)
.. +.+.. .+.++.++++|+.++++.. ...|. | ...++..++|.+++.
T Consensus 101 ~~----~~~~~----~~~~~~~~~~g~~ig~~~~-------p~t~~--e---~~~~~~~~~d~vl~~ 147 (230)
T 1rpx_A 101 QS----STIHL----HRTINQIKSLGAKAGVVLN-------PGTPL--T---AIEYVLDAVDLVLIM 147 (230)
T ss_dssp TT----TCSCH----HHHHHHHHHTTSEEEEEEC-------TTCCG--G---GGTTTTTTCSEEEEE
T ss_pred Cc----cchhH----HHHHHHHHHcCCcEEEEeC-------CCCCH--H---HHHHHHhhCCEEEEE
Confidence 00 11232 4567778888998888631 11222 2 123445789988543
No 137
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=67.66 E-value=67 Score=28.53 Aligned_cols=121 Identities=11% Similarity=0.087 Sum_probs=67.7
Q ss_pred HHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh----cCEEEEeCCCccccCC
Q 012943 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA----SDGAMVARGDLGAELP 346 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~----sDgImIgRGDLg~elg 346 (453)
+++..+.+.|+|+| ++-.-.++ +.++..+. ++.+++-+-|++ |+..+ +|.+-+-+..+. |
T Consensus 74 ~~~~~a~~~Gad~i-v~~~~~~~----~~~~~~~~--g~~vi~g~~t~~------e~~~a~~~Gad~vk~~~~~~~---g 137 (205)
T 1wa3_A 74 EQCRKAVESGAEFI-VSPHLDEE----ISQFCKEK--GVFYMPGVMTPT------ELVKAMKLGHTILKLFPGEVV---G 137 (205)
T ss_dssp HHHHHHHHHTCSEE-ECSSCCHH----HHHHHHHH--TCEEECEECSHH------HHHHHHHTTCCEEEETTHHHH---H
T ss_pred HHHHHHHHcCCCEE-EcCCCCHH----HHHHHHHc--CCcEECCcCCHH------HHHHHHHcCCCEEEEcCcccc---C
Confidence 34566778999999 54443433 22333332 567777555543 33333 677766432210 1
Q ss_pred CCCHHHHHHHHHHHHHHc-CCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccCCCC---HHHHHHHH
Q 012943 347 IEDVPLLQEDIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKF---PLKAVKVM 422 (453)
Q Consensus 347 ~e~v~~aqk~Ii~~c~~a-Gkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~y---P~eaV~~m 422 (453)
...+-+..... +.|++.. .+. +. .++..++..|+|++...+-.-. .. |.++++.+
T Consensus 138 -------~~~~~~l~~~~~~~pvia~---------GGI-~~---~~~~~~~~~Ga~~v~vGs~i~~-~d~~~~~~~~~~~ 196 (205)
T 1wa3_A 138 -------PQFVKAMKGPFPNVKFVPT---------GGV-NL---DNVCEWFKAGVLAVGVGSALVK-GTPDEVREKAKAF 196 (205)
T ss_dssp -------HHHHHHHHTTCTTCEEEEB---------SSC-CT---TTHHHHHHHTCSCEEECHHHHC-SCHHHHHHHHHHH
T ss_pred -------HHHHHHHHHhCCCCcEEEc---------CCC-CH---HHHHHHHHCCCCEEEECccccC-CCHHHHHHHHHHH
Confidence 11222222233 5776663 222 21 2566778899999998654444 56 88888888
Q ss_pred HHHHHH
Q 012943 423 HTVALR 428 (453)
Q Consensus 423 ~~I~~~ 428 (453)
.+++.+
T Consensus 197 ~~~~~~ 202 (205)
T 1wa3_A 197 VEKIRG 202 (205)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 777654
No 138
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=67.44 E-value=64 Score=30.03 Aligned_cols=114 Identities=11% Similarity=0.063 Sum_probs=70.4
Q ss_pred CCCCHhhHHHHHhh-hhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEE--EecCh-------hhhccHHHHHhh-c
Q 012943 263 PSITDKDWEDIKFG-VDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIV--KIESA-------DSIPNLHSIISA-S 331 (453)
Q Consensus 263 p~ltekD~~DI~~a-~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIa--kIET~-------~gv~NldeI~~~-s 331 (453)
|--++.+...+..+ .+.|+.+|.+ .+.++++++++.. +++|+. |..-. .-++.+++.++. +
T Consensus 31 pl~~~~~~~~~A~a~~~~Ga~~i~~---~~~~~i~~ir~~v-----~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Ga 102 (232)
T 3igs_A 31 PLDKPEIVAAMALAAEQAGAVAVRI---EGIDNLRMTRSLV-----SVPIIGIIKRDLDESPVRITPFLDDVDALAQAGA 102 (232)
T ss_dssp TTCSHHHHHHHHHHHHHTTCSEEEE---ESHHHHHHHHTTC-----CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTC
T ss_pred CCCCcchHHHHHHHHHHCCCeEEEE---CCHHHHHHHHHhc-----CCCEEEEEeecCCCcceEeCccHHHHHHHHHcCC
Confidence 34456677777554 5678998765 5788888877643 466665 22100 113345665655 8
Q ss_pred CEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEe
Q 012943 332 DGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVML 405 (453)
Q Consensus 332 DgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmL 405 (453)
|.|.++-..+. .. ...+++++.+++.|.+++.- ..|.. +.-.+...|+|.+..
T Consensus 103 d~V~l~~~~~~---~p----~~l~~~i~~~~~~g~~v~~~-----------v~t~e---ea~~a~~~Gad~Ig~ 155 (232)
T 3igs_A 103 AIIAVDGTARQ---RP----VAVEALLARIHHHHLLTMAD-----------CSSVD---DGLACQRLGADIIGT 155 (232)
T ss_dssp SEEEEECCSSC---CS----SCHHHHHHHHHHTTCEEEEE-----------CCSHH---HHHHHHHTTCSEEEC
T ss_pred CEEEECccccC---CH----HHHHHHHHHHHHCCCEEEEe-----------CCCHH---HHHHHHhCCCCEEEE
Confidence 99988644321 11 23466778888889998863 12333 345778899999963
No 139
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=67.43 E-value=21 Score=32.06 Aligned_cols=60 Identities=18% Similarity=0.297 Sum_probs=44.2
Q ss_pred eecCCCEEEEEeecC--C---CCccEEEeccccccc--ccccCCEEEEe--CCeeEEEEEEEeCCeEEE
Q 012943 180 ILKEGQEFNFTIKRG--V---STEDTVSVNYDDFVN--DVEVGDILLVD--GGMMSLAVKSKTKDLVKC 239 (453)
Q Consensus 180 ~L~~G~~v~lt~~~~--~---~~~~~I~v~~~~l~~--~vk~Gd~IlID--DG~I~L~V~ev~~~~v~~ 239 (453)
-++.|++++|+.... + +......++-..|.. .+++|+.+.+. +|.+..+|++++++.|+.
T Consensus 51 Gm~~Ge~~~v~ippe~aYG~~~~~~v~~v~~~~f~~~~~~~~G~~~~~~~~~G~~~~~V~~v~~~~V~v 119 (171)
T 2k8i_A 51 GHEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQGPVPVEITAVEDDHVVV 119 (171)
T ss_dssp TCCTTCEEEEEEETTTSSCCCCTTSEEEEEGGGGTTSSCCCTTCEEEEEETTEEEEEEEEEECSSEEEE
T ss_pred CCCCCCEEEEEECcHHhcCCCChhhEEEeeHHHCCcccCccCCcEEEEECCCCcEEEEEEEEcCCEEEE
Confidence 468999999987732 2 233456677666764 68999999997 677777899998887653
No 140
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=67.15 E-value=41 Score=30.89 Aligned_cols=134 Identities=10% Similarity=0.127 Sum_probs=65.8
Q ss_pred HHHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEE-----ecCh-------hhhccHHHHHhh-cCEEEE
Q 012943 270 WEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVK-----IESA-------DSIPNLHSIISA-SDGAMV 336 (453)
Q Consensus 270 ~~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIak-----IET~-------~gv~NldeI~~~-sDgImI 336 (453)
.++++.+++.|+|.|.+..- ...+...+.++++..+..+.+-.. +++. ..++.+.+..+. +|.|++
T Consensus 87 ~~~~~~~l~~Gad~V~lg~~-~l~~p~~~~~~~~~~g~~~~~~l~~~~g~v~~~g~~~~~~~~~e~~~~~~~~G~~~i~~ 165 (244)
T 1vzw_A 87 DDTLAAALATGCTRVNLGTA-ALETPEWVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRDGGDLYETLDRLNKEGCARYVV 165 (244)
T ss_dssp HHHHHHHHHTTCSEEEECHH-HHHCHHHHHHHHHHHGGGEEEEEEEETTEECCSSSCCCCCBHHHHHHHHHHTTCCCEEE
T ss_pred HHHHHHHHHcCCCEEEECch-HhhCHHHHHHHHHHcCCcEEEEEEccCCEEEEcCcccCCCCHHHHHHHHHhCCCCEEEE
Confidence 34577777889999887531 112222344444444433322222 3322 223334444444 676665
Q ss_pred eCC--CccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHh---CccEEEecCcccC
Q 012943 337 ARG--DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVRE---GADAVMLSGETAH 411 (453)
Q Consensus 337 gRG--DLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~---G~D~vmLs~ETA~ 411 (453)
-.. |.. .-|+ .+ ...+++ +...+.|++.. .+.-+. .|+..+... |+|++|+..---.
T Consensus 166 ~~~~~~~~-~~g~-~~-~~~~~i---~~~~~ipvia~---------GGI~~~---~d~~~~~~~~~~Gadgv~vG~al~~ 227 (244)
T 1vzw_A 166 TDIAKDGT-LQGP-NL-ELLKNV---CAATDRPVVAS---------GGVSSL---DDLRAIAGLVPAGVEGAIVGKALYA 227 (244)
T ss_dssp EEC--------CC-CH-HHHHHH---HHTCSSCEEEE---------SCCCSH---HHHHHHHTTGGGTEEEEEECHHHHT
T ss_pred eccCcccc-cCCC-CH-HHHHHH---HHhcCCCEEEE---------CCCCCH---HHHHHHHhhccCCCceeeeeHHHHc
Confidence 321 211 1122 22 222233 24458898874 444443 345556666 9999998744445
Q ss_pred CCCH-HHHHHHH
Q 012943 412 GKFP-LKAVKVM 422 (453)
Q Consensus 412 G~yP-~eaV~~m 422 (453)
+.++ .++++.+
T Consensus 228 ~~~~~~~~~~~~ 239 (244)
T 1vzw_A 228 KAFTLEEALEAT 239 (244)
T ss_dssp TSSCHHHHHHHH
T ss_pred CCCCHHHHHHHh
Confidence 5544 4455544
No 141
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=67.10 E-value=1.1e+02 Score=30.89 Aligned_cols=140 Identities=18% Similarity=0.214 Sum_probs=91.4
Q ss_pred HHHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEe-cCh-hhhccHHHHHhhcCEEEEeCCCccccCCC
Q 012943 270 WEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKI-ESA-DSIPNLHSIISASDGAMVARGDLGAELPI 347 (453)
Q Consensus 270 ~~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakI-ET~-~gv~NldeI~~~sDgImIgRGDLg~elg~ 347 (453)
.+.|....+.|+|.|-++. .+.++...++..-++ .+++++|=| -++ .++. .+-.-+|.+-|-||.++-
T Consensus 49 v~Qi~~l~~aG~diVRvav-p~~~~a~al~~I~~~--~~vPlvaDiHf~~~lal~---a~e~G~dklRINPGNig~---- 118 (366)
T 3noy_A 49 LNQIKRLYEAGCEIVRVAV-PHKEDVEALEEIVKK--SPMPVIADIHFAPSYAFL---SMEKGVHGIRINPGNIGK---- 118 (366)
T ss_dssp HHHHHHHHHTTCCEEEEEC-CSHHHHHHHHHHHHH--CSSCEEEECCSCHHHHHH---HHHTTCSEEEECHHHHSC----
T ss_pred HHHHHHHHHcCCCEEEeCC-CChHHHHHHHHHHhc--CCCCEEEeCCCCHHHHHH---HHHhCCCeEEECCcccCc----
Confidence 4556666789999998874 456666666554444 468899987 333 3332 222238999999999873
Q ss_pred CCHHHHHHHHHHHHHHcCCCEEEE-------echhhhhccCCCCchHH-----HHHHHHHHHhCccEEEecCcccCCCCH
Q 012943 348 EDVPLLQEDIIRRCRSMQKPVIVA-------TNMLESMIDHPTPTRAE-----VSDIAIAVREGADAVMLSGETAHGKFP 415 (453)
Q Consensus 348 e~v~~aqk~Ii~~c~~aGkpvi~a-------TqmLeSM~~~~~PtrAE-----v~Dv~nav~~G~D~vmLs~ETA~G~yP 415 (453)
..--+.++.+|+++|+|+-+- ..+|+.+ ..||... +.-+.-+-..|++-+++| .+..-+
T Consensus 119 ---~~~~~~vv~~ak~~~~piRIGvN~GSL~~~ll~~y---g~~~~eamVeSAl~~~~~~e~~gf~~iviS---~K~S~v 189 (366)
T 3noy_A 119 ---EEIVREIVEEAKRRGVAVRIGVNSGSLEKDLLEKY---GYPSAEALAESALRWSEKFEKWGFTNYKVS---IKGSDV 189 (366)
T ss_dssp ---HHHHHHHHHHHHHHTCEEEEEEEGGGCCHHHHHHH---SSCCHHHHHHHHHHHHHHHHHTTCCCEEEE---EECSSH
T ss_pred ---hhHHHHHHHHHHHcCCCEEEecCCcCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHhCCCCeEEEe---eecCCh
Confidence 223467999999999997553 3344433 2344322 223445556799999998 455567
Q ss_pred HHHHHHHHHHHHH
Q 012943 416 LKAVKVMHTVALR 428 (453)
Q Consensus 416 ~eaV~~m~~I~~~ 428 (453)
..+|+.-+.+..+
T Consensus 190 ~~~i~ayr~la~~ 202 (366)
T 3noy_A 190 LQNVRANLIFAER 202 (366)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc
Confidence 7788877777666
No 142
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=66.96 E-value=29 Score=33.55 Aligned_cols=97 Identities=15% Similarity=0.159 Sum_probs=57.8
Q ss_pred HHHHhhhhcCCcEEEec------cccCHHHHHH-HHHHHHhcCCCceEEEEe---cChhhhccHHHHHhh-cCEEEEeCC
Q 012943 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKI---ESADSIPNLHSIISA-SDGAMVARG 339 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lS------fV~sa~dv~~-v~~~L~~~~~~i~IIakI---ET~~gv~NldeI~~~-sDgImIgRG 339 (453)
+.+++.++.|+|+|.+. +.-+.++-.+ ++..++..+.+++||+-+ -|.++++......+. +|++|+-+-
T Consensus 27 ~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 106 (292)
T 3daq_A 27 AHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITP 106 (292)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECCC
Confidence 44577789999998763 2223333333 344445557789999987 356666666655544 899999754
Q ss_pred CccccCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 012943 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (453)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~a 371 (453)
...- ..-+.+...-+.| |.+.+.|+++.
T Consensus 107 ~y~~-~~~~~l~~~f~~i---a~a~~lPiilY 134 (292)
T 3daq_A 107 YYNK-TNQRGLVKHFEAI---ADAVKLPVVLY 134 (292)
T ss_dssp CSSC-CCHHHHHHHHHHH---HHHHCSCEEEE
T ss_pred CCCC-CCHHHHHHHHHHH---HHhCCCCEEEE
Confidence 4321 1112333333444 44458898876
No 143
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=66.47 E-value=37 Score=32.73 Aligned_cols=120 Identities=19% Similarity=0.212 Sum_probs=66.3
Q ss_pred HHHhhhhcCCcEE-Eec-------------cccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh-cCEEEE
Q 012943 272 DIKFGVDNQVDFY-AVS-------------FVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMV 336 (453)
Q Consensus 272 DI~~a~~~gvd~I-~lS-------------fV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~-sDgImI 336 (453)
.++.+.+.|+|+| .+- ..++++.+..+++. -+++++.++=.-. ++.++...+. +|+|.
T Consensus 33 ~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~i~~I~~~-----~~iPv~~k~r~g~-~~~~~~~~a~GAd~V~- 105 (305)
T 2nv1_A 33 QAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNA-----VSIPVMAKARIGH-IVEARVLEAMGVDYID- 105 (305)
T ss_dssp HHHHHHHTTCSEEEECCC-------CCCCCCCCCHHHHHHHHHH-----CSSCEEEEECTTC-HHHHHHHHHHTCSEEE-
T ss_pred HHHHHHHcCCCEEEEcCCCcchhhhccCcccCCCHHHHHHHHHh-----CCCCEEecccccc-hHHHHHHHHCCCCEEE-
Confidence 4455567899988 442 12245555555432 2567777764311 2222333333 89996
Q ss_pred eCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccCCCCHH
Q 012943 337 ARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPL 416 (453)
Q Consensus 337 gRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~ 416 (453)
+..+|.. +.+ .+++. ++..|.++++.+. + ..+...++..|+|.+.++||+-.| -..
T Consensus 106 ~~~~l~~----~~~----~~~i~-~~~~g~~v~~~~~-----------~---~~e~~~a~~~Gad~V~~~G~~g~g-~~~ 161 (305)
T 2nv1_A 106 ESEVLTP----ADE----EFHLN-KNEYTVPFVCGCR-----------D---LGEATRRIAEGASMLRTKGEPGTG-NIV 161 (305)
T ss_dssp ECTTSCC----SCS----SCCCC-GGGCSSCEEEEES-----------S---HHHHHHHHHTTCSEEEECCCTTSC-CTH
T ss_pred EeccCCH----HHH----HHHHH-HhccCCcEEEEeC-----------C---HHHHHHHHHCCCCEEEeccccCcc-chH
Confidence 5444422 221 11222 4567889887531 2 334556778999999999887555 334
Q ss_pred HHHHHH
Q 012943 417 KAVKVM 422 (453)
Q Consensus 417 eaV~~m 422 (453)
+++...
T Consensus 162 ~~~~h~ 167 (305)
T 2nv1_A 162 EAVRHM 167 (305)
T ss_dssp HHHHHH
T ss_pred HHHhhh
Confidence 444444
No 144
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=65.48 E-value=94 Score=30.38 Aligned_cols=140 Identities=16% Similarity=0.176 Sum_probs=80.6
Q ss_pred hhHHHHHhhhhcCCcEEEec-------cccCHHHHHHHHHHHHhcCCCceEEEEecChhh------------hccHHHHH
Q 012943 268 KDWEDIKFGVDNQVDFYAVS-------FVKDAKVVHELKDYLKSCNADIHVIVKIESADS------------IPNLHSII 328 (453)
Q Consensus 268 kD~~DI~~a~~~gvd~I~lS-------fV~sa~dv~~v~~~L~~~~~~i~IIakIET~~g------------v~NldeI~ 328 (453)
.+.+++..|.+.|+|.|=+- -.-+..-+..++++ .+++|.++|.-..| .+.++...
T Consensus 47 ~s~~~a~~A~~gGAdRIELc~~l~~GGlTPS~g~i~~a~~~-----~~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~~~ 121 (287)
T 3iwp_A 47 DSVESAVNAERGGADRIELCSGLSEGGTTPSMGVLQVVKQS-----VQIPVFVMIRPRGGDFLYSDREIEVMKADIRLAK 121 (287)
T ss_dssp SSHHHHHHHHHHTCSEEEECBCGGGTCBCCCHHHHHHHHTT-----CCSCEEEECCSSSSCSCCCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCCEEEECCCCCCCCCCCCHHHHHHHHHh-----cCCCeEEEEecCCCCcccCHHHHHHHHHHHHHHH
Confidence 35677778888899987542 11244555555543 25889999988777 23455555
Q ss_pred hh-cCEEEEeC--CCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEe
Q 012943 329 SA-SDGAMVAR--GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVML 405 (453)
Q Consensus 329 ~~-sDgImIgR--GDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmL 405 (453)
++ +|||.+|- .|=. + ++. .-++++..|. +.++-+- +..--.++..+ .+-..+..|+|.|+.
T Consensus 122 ~~GAdGvVfG~L~~dg~--i---D~~-~~~~Li~~a~--~l~vTFH------RAFD~~~d~~~--Ale~Li~lGvdrILT 185 (287)
T 3iwp_A 122 LYGADGLVFGALTEDGH--I---DKE-LCMSLMAICR--PLPVTFH------RAFDMVHDPMA--ALETLLTLGFERVLT 185 (287)
T ss_dssp HTTCSEEEECCBCTTSC--B---CHH-HHHHHHHHHT--TSCEEEC------GGGGGCSCHHH--HHHHHHHHTCSEEEE
T ss_pred HcCCCEEEEeeeCCCCC--c---CHH-HHHHHHHHcC--CCcEEEE------CchhccCCHHH--HHHHHHHcCCCEEEC
Confidence 45 89999983 2311 1 222 3344555553 4555442 11111122222 222333349999999
Q ss_pred cCcccCCCCHHHHHHHHHHHHHHHhc
Q 012943 406 SGETAHGKFPLKAVKVMHTVALRTES 431 (453)
Q Consensus 406 s~ETA~G~yP~eaV~~m~~I~~~aE~ 431 (453)
||--+. ..+-+..+++.+..+..
T Consensus 186 SG~~~~---a~~Gl~~Lk~Lv~~a~~ 208 (287)
T 3iwp_A 186 SGCDSS---ALEGLPLIKRLIEQAKG 208 (287)
T ss_dssp CTTSSS---TTTTHHHHHHHHHHHTT
T ss_pred CCCCCC---hHHhHHHHHHHHHHhCC
Confidence 885322 25788888888887764
No 145
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=65.47 E-value=78 Score=31.52 Aligned_cols=122 Identities=17% Similarity=0.145 Sum_probs=65.6
Q ss_pred CCCHhhHHHH--------HhhhhcCCcEEEecc-------------ccCHHH----------------HHHHHHHHHhcC
Q 012943 264 SITDKDWEDI--------KFGVDNQVDFYAVSF-------------VKDAKV----------------VHELKDYLKSCN 306 (453)
Q Consensus 264 ~ltekD~~DI--------~~a~~~gvd~I~lSf-------------V~sa~d----------------v~~v~~~L~~~~ 306 (453)
.||..|++.+ +.+.+.|+|+|=+.. .+...| +..+++.+ +
T Consensus 150 ~mt~~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~v---g 226 (365)
T 2gou_A 150 AMTKADIAQVIADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAI---G 226 (365)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHH---C
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHc---C
Confidence 5788887665 223678999998733 211111 33344333 4
Q ss_pred CCceEEEEecChh---------hhccHHHHHhh-----cCEEEEeCCCccccCCCCCHHHHHHHHHH-HHHHcCCCEEEE
Q 012943 307 ADIHVIVKIESAD---------SIPNLHSIISA-----SDGAMVARGDLGAELPIEDVPLLQEDIIR-RCRSMQKPVIVA 371 (453)
Q Consensus 307 ~~i~IIakIET~~---------gv~NldeI~~~-----sDgImIgRGDLg~elg~e~v~~aqk~Ii~-~c~~aGkpvi~a 371 (453)
.+ .|..||=.-+ .++...++++. +|.|-+..+...-.-+. .+ ..++ ..+..++|+|..
T Consensus 227 ~~-pv~vris~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~-~~-----~~~~~i~~~~~iPvi~~ 299 (365)
T 2gou_A 227 AE-RVGVRLAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEVDWDDAPDT-PV-----SFKRALREAYQGVLIYA 299 (365)
T ss_dssp GG-GEEEEECSSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCC-CH-----HHHHHHHHHCCSEEEEE
T ss_pred CC-cEEEEEccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcCCCCCc-cH-----HHHHHHHHHCCCcEEEe
Confidence 44 6788884321 22333333432 68888876543211111 11 2222 233457888774
Q ss_pred echhhhhccCCCCchHHHHHHHHHHHhC-ccEEEecCc
Q 012943 372 TNMLESMIDHPTPTRAEVSDIAIAVREG-ADAVMLSGE 408 (453)
Q Consensus 372 TqmLeSM~~~~~PtrAEv~Dv~nav~~G-~D~vmLs~E 408 (453)
... +. .++..++..| +|+|++...
T Consensus 300 ---------Ggi-~~---~~a~~~l~~g~aD~V~igR~ 324 (365)
T 2gou_A 300 ---------GRY-NA---EKAEQAINDGLADMIGFGRP 324 (365)
T ss_dssp ---------SSC-CH---HHHHHHHHTTSCSEEECCHH
T ss_pred ---------CCC-CH---HHHHHHHHCCCcceehhcHH
Confidence 233 42 3456788888 999999643
No 146
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=65.26 E-value=36 Score=31.12 Aligned_cols=126 Identities=13% Similarity=0.141 Sum_probs=63.3
Q ss_pred HHHHHhhhhcCCcEEEecc--ccCHHHHHHHHHHHHhcCCCceEE--EE-------ecCh-------hhhccHHHHHhh-
Q 012943 270 WEDIKFGVDNQVDFYAVSF--VKDAKVVHELKDYLKSCNADIHVI--VK-------IESA-------DSIPNLHSIISA- 330 (453)
Q Consensus 270 ~~DI~~a~~~gvd~I~lSf--V~sa~dv~~v~~~L~~~~~~i~II--ak-------IET~-------~gv~NldeI~~~- 330 (453)
.++++.+++.|+|.|.+.. ..+++.+. +++...+..+.+- ++ +.+. ..++.++.+.+.
T Consensus 86 ~~~~~~~l~~Gad~V~lg~~~l~~p~~~~---~~~~~~g~~~~~~ld~~~~~~~~~v~~~g~~~~~~~~~e~~~~~~~~G 162 (244)
T 2y88_A 86 DESLAAALATGCARVNVGTAALENPQWCA---RVIGEHGDQVAVGLDVQIIDGEHRLRGRGWETDGGDLWDVLERLDSEG 162 (244)
T ss_dssp HHHHHHHHHTTCSEEEECHHHHHCHHHHH---HHHHHHGGGEEEEEEEEEETTEEEEEEGGGTEEEEEHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCEEEECchHhhChHHHH---HHHHHcCCCEEEEEeccccCCCCEEEECCccCCCCCHHHHHHHHHhCC
Confidence 3457777788999988753 23333343 4444434332211 12 2222 123444444444
Q ss_pred cCEEEEeCCCccccC-CCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHh---CccEEEec
Q 012943 331 SDGAMVARGDLGAEL-PIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVRE---GADAVMLS 406 (453)
Q Consensus 331 sDgImIgRGDLg~el-g~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~---G~D~vmLs 406 (453)
+|.|++-..+..-.. |+ .+. ..+++ +...+.|++.. .+.-+. .|+..+... |+|++|+.
T Consensus 163 ~~~i~~~~~~~~~~~~g~-~~~-~~~~l---~~~~~ipvia~---------GGI~~~---~d~~~~~~~~~~Gad~v~vG 225 (244)
T 2y88_A 163 CSRFVVTDITKDGTLGGP-NLD-LLAGV---ADRTDAPVIAS---------GGVSSL---DDLRAIATLTHRGVEGAIVG 225 (244)
T ss_dssp CCCEEEEETTTTTTTSCC-CHH-HHHHH---HTTCSSCEEEE---------SCCCSH---HHHHHHHTTGGGTEEEEEEC
T ss_pred CCEEEEEecCCccccCCC-CHH-HHHHH---HHhCCCCEEEE---------CCCCCH---HHHHHHHhhccCCCCEEEEc
Confidence 687776443332111 22 222 22222 23457888873 445554 345555655 99999996
Q ss_pred CcccCCCCH
Q 012943 407 GETAHGKFP 415 (453)
Q Consensus 407 ~ETA~G~yP 415 (453)
.---.+.+.
T Consensus 226 ~al~~~~~~ 234 (244)
T 2y88_A 226 KALYARRFT 234 (244)
T ss_dssp HHHHTTSSC
T ss_pred HHHHCCCcC
Confidence 444445543
No 147
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=65.12 E-value=25 Score=43.31 Aligned_cols=121 Identities=14% Similarity=0.078 Sum_probs=74.9
Q ss_pred hHHHHHhhhhcCCcE--EEeccccCHHHHHHHHHHHHhcCCCceEEEEecCh-hhhccHHHHHhh-cCEEE---EeCCCc
Q 012943 269 DWEDIKFGVDNQVDF--YAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESA-DSIPNLHSIISA-SDGAM---VARGDL 341 (453)
Q Consensus 269 D~~DI~~a~~~gvd~--I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~-~gv~NldeI~~~-sDgIm---IgRGDL 341 (453)
..+.++.+++.|++. |.+++-. + ..+++.+++.+. .+.++..+-+. ++.+....|.++ +|+++ +--+|=
T Consensus 655 ~~~~~~~~~~~gv~i~gv~~~~G~-p-~~e~~~~~l~~~--gi~~i~~v~~~~~a~~~v~~l~~aG~D~iV~~q~~G~ea 730 (2060)
T 2uva_G 655 QIPLLGRLRADGVPIEGLTIGAGV-P-SIEVANEYIQTL--GIRHISFKPGSVDAIQQVINIAKANPTFPIILQWTGGRG 730 (2060)
T ss_dssp HHHHHHHHHTTTCCEEEEEEESSC-C-CHHHHHHHHHHS--CCSEEEECCCSHHHHHHHHHHHHHCTTSCEEEEECCTTS
T ss_pred HHHHHHHHHHcCCCcceEeecCCC-C-CHHHHHHHHHHc--CCeEEEecCCHHHHHHHHHHHHHcCCCEEEEeeeEcccC
Confidence 346677788899998 7666543 1 223345677665 45566655444 334333444554 89888 655666
Q ss_pred cccCCCCCHHHHHHHHHHHHHHc-CCCEEEEechhhhhccCCCCchHHHHHHHHHH-----------HhCccEEEe
Q 012943 342 GAELPIEDVPLLQEDIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAEVSDIAIAV-----------REGADAVML 405 (453)
Q Consensus 342 g~elg~e~v~~aqk~Ii~~c~~a-Gkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav-----------~~G~D~vmL 405 (453)
|-..|.+.+....-.++...+++ +.|+|.| .+.-+ -.|++.++ ..|+|+|++
T Consensus 731 GGH~g~~d~~~~~l~lv~~i~~~~~ipviaa---------GGI~~---g~~i~aaltg~ws~~~g~palGAdgV~~ 794 (2060)
T 2uva_G 731 GGHHSFEDFHQPILLMYSRIRKCSNIVLVAG---------SGFGG---SEDTYPYLTGSWSTKFGYPPMPFDGCMF 794 (2060)
T ss_dssp SSSCCSCCSHHHHHHHHHHHHTSTTEEEEEE---------SSCCS---HHHHHHHHHTCGGGTTTSCCCCCSCEEE
T ss_pred CCCCCcccccchHHHHHHHHHHHcCCCEEEe---------CCCCC---HHHHHHHhcCcchhhcCCCCCCCCEEEE
Confidence 66666544333333445555554 7888876 44444 45788889 899999997
No 148
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=65.02 E-value=14 Score=34.27 Aligned_cols=130 Identities=15% Similarity=0.197 Sum_probs=66.1
Q ss_pred HhhhhcCCcEEEeccccC---HHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh-cCEEEEeCCCc-cccCCC-
Q 012943 274 KFGVDNQVDFYAVSFVKD---AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDL-GAELPI- 347 (453)
Q Consensus 274 ~~a~~~gvd~I~lSfV~s---a~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~-sDgImIgRGDL-g~elg~- 347 (453)
..+.+.|+|+|.+...++ .+++.++.+...+. .+.++.-|=+.+-.+. +... .+-|-+.+.++ | .|.
T Consensus 76 ~~~~~~Gad~Vll~~ser~l~~~e~~~~~~~a~~~--Gl~~iv~v~~~~e~~~---~~~~~~~~i~~~~~~~iG--tG~~ 148 (219)
T 2h6r_A 76 EAIKDCGCKGTLINHSEKRMLLADIEAVINKCKNL--GLETIVCTNNINTSKA---VAALSPDCIAVEPPELIG--TGIP 148 (219)
T ss_dssp HHHHHHTCCEEEESBTTBCCBHHHHHHHHHHHHHH--TCEEEEEESSSHHHHH---HTTTCCSEEEECCCC---------
T ss_pred HHHHHcCCCEEEECCccccCCHHHHHHHHHHHHHC--CCeEEEEeCCchHHHH---HHhCCCCEEEEEeccccc--cCCC
Confidence 344577999999987532 34444444444443 3445555533322222 2222 45666667666 2 221
Q ss_pred --CCHHH-HHHHHHHHHHHc--CCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccCCCCHHHHHHHH
Q 012943 348 --EDVPL-LQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVM 422 (453)
Q Consensus 348 --e~v~~-aqk~Ii~~c~~a--Gkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m 422 (453)
..-+. ++ .+.+..++. +.|++. ..+.=+. .++..+...|+|+++..+---.-.-|.++++-|
T Consensus 149 ~~t~~~~~~~-~~~~~ir~~~~~~~ii~---------ggGI~~~---~~~~~~~~~gaDgvlVGsAi~~~~d~~~~~~~l 215 (219)
T 2h6r_A 149 VSKANPEVVE-GTVRAVKEINKDVKVLC---------GAGISKG---EDVKAALDLGAEGVLLASGVVKAKNVEEAIREL 215 (219)
T ss_dssp -------CSH-HHHHHHHHHCTTCEEEE---------CSSCCSH---HHHHHHHTTTCCCEEESHHHHTCSSHHHHHHHH
T ss_pred CccCCHHHHH-HHHHHHHhccCCCeEEE---------EeCcCcH---HHHHHHhhCCCCEEEEcHHHhCcccHHHHHHHH
Confidence 10111 22 333334443 566665 3333332 334456778999999865544566787777765
Q ss_pred H
Q 012943 423 H 423 (453)
Q Consensus 423 ~ 423 (453)
.
T Consensus 216 ~ 216 (219)
T 2h6r_A 216 I 216 (219)
T ss_dssp C
T ss_pred H
Confidence 4
No 149
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=65.01 E-value=1.2e+02 Score=30.43 Aligned_cols=154 Identities=14% Similarity=0.109 Sum_probs=92.6
Q ss_pred CCCHhhHHHH-HhhhhcCCcEEEeccc-cCHHHHHHHHHHHHhcCCCceEEEEe-cChhhhccHHHHHhh-cC--EEEEe
Q 012943 264 SITDKDWEDI-KFGVDNQVDFYAVSFV-KDAKVVHELKDYLKSCNADIHVIVKI-ESADSIPNLHSIISA-SD--GAMVA 337 (453)
Q Consensus 264 ~ltekD~~DI-~~a~~~gvd~I~lSfV-~sa~dv~~v~~~L~~~~~~i~IIakI-ET~~gv~NldeI~~~-sD--gImIg 337 (453)
.++..|+..| +...+.|+|.|=+.|- .++.+...++. +.+.+....+.+-. ...+. ++..++. .| .++++
T Consensus 21 ~~~~~~k~~ia~~L~~~Gv~~IE~g~p~~~~~~~~~~~~-i~~~~~~~~v~~~~r~~~~d---i~~a~~~g~~~v~i~~~ 96 (382)
T 2ztj_A 21 NFSTQDKVEIAKALDEFGIEYIEVTTPVASPQSRKDAEV-LASLGLKAKVVTHIQCRLDA---AKVAVETGVQGIDLLFG 96 (382)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHH-HHTSCCSSEEEEEEESCHHH---HHHHHHTTCSEEEEEEC
T ss_pred CcCHHHHHHHHHHHHHcCcCEEEEcCCcCCHHHHHHHHH-HHhcCCCcEEEEEcccChhh---HHHHHHcCCCEEEEEec
Confidence 4677777665 4445689999988663 45555555444 44445555555432 12222 3333333 45 56666
Q ss_pred CCCcccc-CC--CCCHHHHHHHHHHHHHHcC--CCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccCC
Q 012943 338 RGDLGAE-LP--IEDVPLLQEDIIRRCRSMQ--KPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHG 412 (453)
Q Consensus 338 RGDLg~e-lg--~e~v~~aqk~Ii~~c~~aG--kpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G 412 (453)
-.|+-.. ++ .+++.......++.++++| ..+.+.- ......+...+.+++.++.+-+|.+.| .+|.=.
T Consensus 97 ~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~------ed~~~~~~~~~~~~~~~~~~~a~~i~l-~DT~G~ 169 (382)
T 2ztj_A 97 TSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRFSA------EDTFRSEEQDLLAVYEAVAPYVDRVGL-ADTVGV 169 (382)
T ss_dssp C--------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEE------TTTTTSCHHHHHHHHHHHGGGCSEEEE-EETTSC
T ss_pred cCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEEE------EeCCCCCHHHHHHHHHHHHHhcCEEEe-cCCCCC
Confidence 6664433 11 2345566788899999999 6655531 123344445577777766655898888 488888
Q ss_pred CCHHHHHHHHHHHHHH
Q 012943 413 KFPLKAVKVMHTVALR 428 (453)
Q Consensus 413 ~yP~eaV~~m~~I~~~ 428 (453)
..|-++-+.++.+..+
T Consensus 170 ~~P~~~~~lv~~l~~~ 185 (382)
T 2ztj_A 170 ATPRQVYALVREVRRV 185 (382)
T ss_dssp CCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHh
Confidence 8999988888887664
No 150
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=64.88 E-value=1e+02 Score=29.76 Aligned_cols=141 Identities=20% Similarity=0.257 Sum_probs=85.0
Q ss_pred CHhhHHHH-Hhhhh--cCCcEEEeccc-------cCHHHHHHHHHHHHhcCCCceEEE-EecChhhhccHHHHHhh-cCE
Q 012943 266 TDKDWEDI-KFGVD--NQVDFYAVSFV-------KDAKVVHELKDYLKSCNADIHVIV-KIESADSIPNLHSIISA-SDG 333 (453)
Q Consensus 266 tekD~~DI-~~a~~--~gvd~I~lSfV-------~sa~dv~~v~~~L~~~~~~i~IIa-kIET~~gv~NldeI~~~-sDg 333 (453)
|.+|.--+ +.+.+ .|.+||=+-.+ .+.....+..+.|. .....++. -..++.--..++ .. +|.
T Consensus 85 ta~eAv~~a~lare~~~~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~--~~Gf~Vlpy~~dd~~~akrl~---~~G~~a 159 (265)
T 1wv2_A 85 DAVEAVRTCRLARELLDGHNLVKLEVLADQKTLFPNVVETLKAAEQLV--KDGFDVMVYTSDDPIIARQLA---EIGCIA 159 (265)
T ss_dssp SHHHHHHHHHHHHTTTTSCCEEEECCBSCTTTCCBCHHHHHHHHHHHH--TTTCEEEEEECSCHHHHHHHH---HSCCSE
T ss_pred CHHHHHHHHHHHHHHcCCCCeEEEEeecCccccCcCHHHHHHHHHHHH--HCCCEEEEEeCCCHHHHHHHH---HhCCCE
Confidence 55554222 33333 47888877655 23333333333333 23556664 455544333333 33 788
Q ss_pred EEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccCCC
Q 012943 334 AMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGK 413 (453)
Q Consensus 334 ImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~ 413 (453)
+|--....|...|+.. +...+.|.+ ..+.|||+. .+.-| -+|++.+...|+|+|++..--+.++
T Consensus 160 VmPlg~pIGsG~Gi~~-~~lI~~I~e---~~~vPVI~e---------GGI~T---PsDAa~AmeLGAdgVlVgSAI~~a~ 223 (265)
T 1wv2_A 160 VMPLAGLIGSGLGICN-PYNLRIILE---EAKVPVLVD---------AGVGT---ASDAAIAMELGCEAVLMNTAIAHAK 223 (265)
T ss_dssp EEECSSSTTCCCCCSC-HHHHHHHHH---HCSSCBEEE---------SCCCS---HHHHHHHHHHTCSEEEESHHHHTSS
T ss_pred EEeCCccCCCCCCcCC-HHHHHHHHh---cCCCCEEEe---------CCCCC---HHHHHHHHHcCCCEEEEChHHhCCC
Confidence 8773334455555545 344455544 468999984 44555 4568899999999999987777899
Q ss_pred CHHHHHHHHHHHHH
Q 012943 414 FPLKAVKVMHTVAL 427 (453)
Q Consensus 414 yP~eaV~~m~~I~~ 427 (453)
.|.+-.+.|..-+.
T Consensus 224 dP~~ma~af~~Av~ 237 (265)
T 1wv2_A 224 DPVMMAEAMKHAIV 237 (265)
T ss_dssp SHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 99988888877654
No 151
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=64.73 E-value=41 Score=32.74 Aligned_cols=131 Identities=10% Similarity=0.073 Sum_probs=76.6
Q ss_pred CCCHhhHHHHHhhhhcCCcEEEeccc-------------cCHHHHHHHHHHHHhcCCCceEEEEecC-------hhhhcc
Q 012943 264 SITDKDWEDIKFGVDNQVDFYAVSFV-------------KDAKVVHELKDYLKSCNADIHVIVKIES-------ADSIPN 323 (453)
Q Consensus 264 ~ltekD~~DI~~a~~~gvd~I~lSfV-------------~sa~dv~~v~~~L~~~~~~i~IIakIET-------~~gv~N 323 (453)
.+|.+|.---+.+-+.|+|.|.+... -+.+++....+.+.+.-+...|++=++- .++++|
T Consensus 21 ~~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~~s~~~a~~n 100 (275)
T 1o66_A 21 MLTAYESSFAALMDDAGVEMLLVGDSLGMAVQGRKSTLPVSLRDMCYHTECVARGAKNAMIVSDLPFGAYQQSKEQAFAA 100 (275)
T ss_dssp EEECCSHHHHHHHHHTTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEEEECCTTSSSSCHHHHHHH
T ss_pred EEeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhCCCCeEEEECCCCCccCCHHHHHHH
Confidence 44566765556666789999876421 1234444333344444455677776652 357788
Q ss_pred HHHHHhh-cCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEe----ch---hhhhccCCCCchHH--HHHHH
Q 012943 324 LHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVAT----NM---LESMIDHPTPTRAE--VSDIA 393 (453)
Q Consensus 324 ldeI~~~-sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aT----qm---LeSM~~~~~PtrAE--v~Dv~ 393 (453)
...++++ +++|-+--|+ .+...|+++.++|.||+--- |- +......++..+++ +.|.-
T Consensus 101 a~rl~kaGa~aVklEdg~------------e~~~~I~al~~agIpV~gHiGLtPQs~~~~ggf~v~grt~~a~~~i~rA~ 168 (275)
T 1o66_A 101 AAELMAAGAHMVKLEGGV------------WMAETTEFLQMRGIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQALLNDAK 168 (275)
T ss_dssp HHHHHHTTCSEEEEECSG------------GGHHHHHHHHHTTCCEEEEEESCGGGTTC-----------CHHHHHHHHH
T ss_pred HHHHHHcCCcEEEECCcH------------HHHHHHHHHHHcCCCeEeeeccCceeecccCCeEEEeChHHHHHHHHHHH
Confidence 8888886 7899885441 34455667778999987211 11 11111111212233 77777
Q ss_pred HHHHhCccEEEec
Q 012943 394 IAVREGADAVMLS 406 (453)
Q Consensus 394 nav~~G~D~vmLs 406 (453)
-....|+|+++|=
T Consensus 169 a~~eAGA~~ivlE 181 (275)
T 1o66_A 169 AHDDAGAAVVLME 181 (275)
T ss_dssp HHHHTTCSEEEEE
T ss_pred HHHHcCCcEEEEe
Confidence 8888999999994
No 152
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=64.43 E-value=1e+02 Score=31.76 Aligned_cols=89 Identities=17% Similarity=0.187 Sum_probs=50.2
Q ss_pred Cce-EEEEecChhhhccHHHHHhh-----cCEEEEeCC-----Cc---cccCC-CC--CHHHHHHHHHHHHHHc---CCC
Q 012943 308 DIH-VIVKIESADSIPNLHSIISA-----SDGAMVARG-----DL---GAELP-IE--DVPLLQEDIIRRCRSM---QKP 367 (453)
Q Consensus 308 ~i~-IIakIET~~gv~NldeI~~~-----sDgImIgRG-----DL---g~elg-~e--~v~~aqk~Ii~~c~~a---Gkp 367 (453)
+.+ |++||=---..+++.+|++. +|+|.+.-+ |+ ..+.| +. .+....-+++...+++ ..|
T Consensus 296 ~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iP 375 (443)
T 1tv5_A 296 KKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIP 375 (443)
T ss_dssp SCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSC
T ss_pred CCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCc
Confidence 466 89998432222355556554 699987643 21 11111 11 1222233444444443 688
Q ss_pred EEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCc
Q 012943 368 VIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGE 408 (453)
Q Consensus 368 vi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~E 408 (453)
+|.. .+.-+ ..|+..++..|+|+|++..-
T Consensus 376 VIg~---------GGI~s---~~DA~e~l~aGAd~Vqigra 404 (443)
T 1tv5_A 376 IIAS---------GGIFS---GLDALEKIEAGASVCQLYSC 404 (443)
T ss_dssp EEEE---------SSCCS---HHHHHHHHHTTEEEEEESHH
T ss_pred EEEE---------CCCCC---HHHHHHHHHcCCCEEEEcHH
Confidence 8764 33444 55788889999999999744
No 153
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=64.35 E-value=93 Score=28.99 Aligned_cols=93 Identities=12% Similarity=0.092 Sum_probs=51.1
Q ss_pred hhHHHHHhhhhcCCcEEEe--cccc--------------------CHHHHHHHHHHHHhcCCCceEEEEe-cChhhhccH
Q 012943 268 KDWEDIKFGVDNQVDFYAV--SFVK--------------------DAKVVHELKDYLKSCNADIHVIVKI-ESADSIPNL 324 (453)
Q Consensus 268 kD~~DI~~a~~~gvd~I~l--SfV~--------------------sa~dv~~v~~~L~~~~~~i~IIakI-ET~~gv~Nl 324 (453)
.-.+.++...+.|+|+|-+ ||.. +.+....+-+.+.+. .+++++.+. .++.-...+
T Consensus 33 ~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~-~~~Pv~~m~~~~~~~~~~~ 111 (262)
T 1rd5_A 33 TTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPE-LSCPVVLLSYYKPIMFRSL 111 (262)
T ss_dssp HHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGG-CSSCEEEECCSHHHHSCCT
T ss_pred HHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc-CCCCEEEEecCcHHHHHHH
Confidence 3346667777889998766 4431 223233333333332 356677663 222111122
Q ss_pred HHHHhh-cCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 012943 325 HSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (453)
Q Consensus 325 deI~~~-sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~a 371 (453)
+...++ +||+.+ .|+.. ++ ..+++..++++|.+.+..
T Consensus 112 ~~a~~aGadgv~v--~d~~~----~~----~~~~~~~~~~~g~~~i~~ 149 (262)
T 1rd5_A 112 AKMKEAGVHGLIV--PDLPY----VA----AHSLWSEAKNNNLELVLL 149 (262)
T ss_dssp HHHHHTTCCEEEC--TTCBT----TT----HHHHHHHHHHTTCEECEE
T ss_pred HHHHHcCCCEEEE--cCCCh----hh----HHHHHHHHHHcCCceEEE
Confidence 334444 799998 35544 33 356777899999886553
No 154
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=64.08 E-value=12 Score=37.70 Aligned_cols=47 Identities=21% Similarity=0.379 Sum_probs=37.1
Q ss_pred EEEecCCCCCCHHHHHHHHHhCCcEEEeecCCCChHHHHHHHHHHHH
Q 012943 103 IVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKE 149 (453)
Q Consensus 103 Ii~TiGPss~s~e~i~~Li~aGmnvaRiNfSHg~~e~~~~~I~~iR~ 149 (453)
+-+.+|......+.++.|+++|++++=||.+||..+.+.+.++.+|+
T Consensus 99 vga~vg~~~~~~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~ 145 (366)
T 4fo4_A 99 VGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRA 145 (366)
T ss_dssp CEEECCSCTTCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHH
T ss_pred EEEEeccChhHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHH
Confidence 44455655567899999999999999999999988766666666654
No 155
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=63.88 E-value=24 Score=34.49 Aligned_cols=98 Identities=16% Similarity=0.172 Sum_probs=57.4
Q ss_pred HHHHhhhhcCCcEEEec------cccCHHHHHH-HHHHHHhcCCCceEEEEe---cChhhhccHHHHHhh-cCEEEEeCC
Q 012943 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKI---ESADSIPNLHSIISA-SDGAMVARG 339 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lS------fV~sa~dv~~-v~~~L~~~~~~i~IIakI---ET~~gv~NldeI~~~-sDgImIgRG 339 (453)
+.+++.++.|+|+|.+. +.-+.++-.+ ++..++..+.+++||+-+ -|.++++......+. +|++++-+-
T Consensus 33 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 112 (309)
T 3fkr_A 33 RAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLRAQQLGAAMVMAMPP 112 (309)
T ss_dssp HHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred HHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCchHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 44477789999998772 2223333333 344445556789999976 355666666555444 799999754
Q ss_pred Cccc--cCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 012943 340 DLGA--ELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (453)
Q Consensus 340 DLg~--elg~e~v~~aqk~Ii~~c~~aGkpvi~a 371 (453)
.... -..-+.+. ...-..|.+.+.|+++.
T Consensus 113 yy~~~~~~s~~~l~---~~f~~va~a~~lPiilY 143 (309)
T 3fkr_A 113 YHGATFRVPEAQIF---EFYARVSDAIAIPIMVQ 143 (309)
T ss_dssp CBTTTBCCCHHHHH---HHHHHHHHHCSSCEEEE
T ss_pred CCccCCCCCHHHHH---HHHHHHHHhcCCCEEEE
Confidence 4321 11112333 33333455668888876
No 156
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=63.58 E-value=81 Score=28.05 Aligned_cols=113 Identities=18% Similarity=0.170 Sum_probs=63.8
Q ss_pred HHHHHhhhhcCCcEEEec--c--ccCHHHHHHHHHHHHhcCCCceEEEEecChhhhcc-HHHHHhh-cCEEEEeCCCccc
Q 012943 270 WEDIKFGVDNQVDFYAVS--F--VKDAKVVHELKDYLKSCNADIHVIVKIESADSIPN-LHSIISA-SDGAMVARGDLGA 343 (453)
Q Consensus 270 ~~DI~~a~~~gvd~I~lS--f--V~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~N-ldeI~~~-sDgImIgRGDLg~ 343 (453)
.+.++.. ..|+|+|-+. | -...+.++++++. ..+.++.+-.=+..+.+. +++.+++ +|++.+. ++.
T Consensus 16 ~~~~~~~-~~~~diie~G~p~~~~~g~~~i~~ir~~----~~~~~i~~~~~~~~~~~~~~~~~~~~Gad~v~v~--~~~- 87 (211)
T 3f4w_A 16 MVFMDKV-VDDVDIIEVGTPFLIREGVNAIKAIKEK----YPHKEVLADAKIMDGGHFESQLLFDAGADYVTVL--GVT- 87 (211)
T ss_dssp HHHHHHH-GGGCSEEEECHHHHHHHTTHHHHHHHHH----CTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEE--TTS-
T ss_pred HHHHHHh-hcCccEEEeCcHHHHhccHHHHHHHHHh----CCCCEEEEEEEeccchHHHHHHHHhcCCCEEEEe--CCC-
Confidence 3444433 3589996554 4 2334444444442 234556553322334444 5665555 8999994 222
Q ss_pred cCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEec
Q 012943 344 ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (453)
Q Consensus 344 elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (453)
.....+.+++.|+++|+++++. | .++ .|. ...+..+...|+|.+.+.
T Consensus 88 ------~~~~~~~~~~~~~~~g~~~~v~------~-~~~-~t~--~~~~~~~~~~g~d~i~v~ 134 (211)
T 3f4w_A 88 ------DVLTIQSCIRAAKEAGKQVVVD------M-ICV-DDL--PARVRLLEEAGADMLAVH 134 (211)
T ss_dssp ------CHHHHHHHHHHHHHHTCEEEEE------C-TTC-SSH--HHHHHHHHHHTCCEEEEE
T ss_pred ------ChhHHHHHHHHHHHcCCeEEEE------e-cCC-CCH--HHHHHHHHHcCCCEEEEc
Confidence 1234478888999999998863 1 111 121 233557788899998764
No 157
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=63.44 E-value=97 Score=28.89 Aligned_cols=130 Identities=16% Similarity=0.176 Sum_probs=74.0
Q ss_pred HHHHhhhhcCCcEEEe-----ccccC----HHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh-cCEEEEeCCC
Q 012943 271 EDIKFGVDNQVDFYAV-----SFVKD----AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGD 340 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~l-----SfV~s----a~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~-sDgImIgRGD 340 (453)
+.++.+ +.|+|++=+ .||.+ +..++.+|++. +..+.+-.||+.++-. ++..+++ +|++.+-.
T Consensus 17 ~~i~~~-~~gad~lHvDvmDG~fvpn~t~G~~~v~~lr~~~---~~~~dvhLmv~dp~~~--i~~~~~aGAd~itvh~-- 88 (231)
T 3ctl_A 17 EQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLA---TKPLDCHLMVTRPQDY--IAQLARAGADFITLHP-- 88 (231)
T ss_dssp HHHHHH-HTTCSCEEEEEECSSSSSCCCBCHHHHHHHHTTC---CSCEEEEEESSCGGGT--HHHHHHHTCSEEEECG--
T ss_pred HHHHHH-HcCCCEEEEEEEeCccCccchhcHHHHHHHHhcc---CCcEEEEEEecCHHHH--HHHHHHcCCCEEEECc--
Confidence 445555 777776421 34433 44455554431 3345566789988654 5666666 89998841
Q ss_pred ccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEe-cCcc-----cCCCC
Q 012943 341 LGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVML-SGET-----AHGKF 414 (453)
Q Consensus 341 Lg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmL-s~ET-----A~G~y 414 (453)
|-. .. --.+.++.++++|+.++++. +...| .| ....+.+++|.|++ |-+. ..+.+
T Consensus 89 ---Ea~---~~-~~~~~i~~i~~~G~k~gv~l-------np~tp--~~---~~~~~l~~~D~VlvmsV~pGfggQ~f~~~ 149 (231)
T 3ctl_A 89 ---ETI---NG-QAFRLIDEIRRHDMKVGLIL-------NPETP--VE---AMKYYIHKADKITVMTVDPGFAGQPFIPE 149 (231)
T ss_dssp ---GGC---TT-THHHHHHHHHHTTCEEEEEE-------CTTCC--GG---GGTTTGGGCSEEEEESSCTTCSSCCCCTT
T ss_pred ---ccC---Cc-cHHHHHHHHHHcCCeEEEEE-------ECCCc--HH---HHHHHHhcCCEEEEeeeccCcCCccccHH
Confidence 210 11 23588999999999999973 12233 22 22345578998864 3333 22334
Q ss_pred HHHHHHHHHHHHH
Q 012943 415 PLKAVKVMHTVAL 427 (453)
Q Consensus 415 P~eaV~~m~~I~~ 427 (453)
..+=|+.+++++.
T Consensus 150 ~l~kI~~lr~~~~ 162 (231)
T 3ctl_A 150 MLDKLAELKAWRE 162 (231)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 4555566666554
No 158
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=62.89 E-value=65 Score=30.45 Aligned_cols=117 Identities=18% Similarity=0.223 Sum_probs=64.4
Q ss_pred HHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhhcCEEE--EeCCCc-cccCCC
Q 012943 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAM--VARGDL-GAELPI 347 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~sDgIm--IgRGDL-g~elg~ 347 (453)
+.++.+.+.|+|++.++=. ..+++..+.+++.+.|-. ++..+.-....+.+.+|++.++|+. ++.-+. |..-+
T Consensus 113 ~f~~~~~~aG~dgvii~dl-~~ee~~~~~~~~~~~gl~--~i~l~~p~t~~~rl~~ia~~a~gfiy~vs~~g~TG~~~~- 188 (262)
T 2ekc_A 113 KFCRLSREKGIDGFIVPDL-PPEEAEELKAVMKKYVLS--FVPLGAPTSTRKRIKLICEAADEMTYFVSVTGTTGAREK- 188 (262)
T ss_dssp HHHHHHHHTTCCEEECTTC-CHHHHHHHHHHHHHTTCE--ECCEECTTCCHHHHHHHHHHCSSCEEEESSCC--------
T ss_pred HHHHHHHHcCCCEEEECCC-CHHHHHHHHHHHHHcCCc--EEEEeCCCCCHHHHHHHHHhCCCCEEEEecCCccCCCCC-
Confidence 4445566789999888744 346677777777776543 3334433344567888888866432 222111 11111
Q ss_pred CCHH-HHHHHHHHHHHHc-CCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEec
Q 012943 348 EDVP-LLQEDIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (453)
Q Consensus 348 e~v~-~aqk~Ii~~c~~a-Gkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (453)
.. .-....++..+++ +.|+++. .+.-|.. ++.. +..|+|+++..
T Consensus 189 --~~~~~~~~~v~~vr~~~~~pv~vG---------~GI~t~e---~~~~-~~~gADgvIVG 234 (262)
T 2ekc_A 189 --LPYERIKKKVEEYRELCDKPVVVG---------FGVSKKE---HARE-IGSFADGVVVG 234 (262)
T ss_dssp ----CHHHHHHHHHHHHHCCSCEEEE---------SSCCSHH---HHHH-HHTTSSEEEEC
T ss_pred --cCcccHHHHHHHHHhhcCCCEEEe---------CCCCCHH---HHHH-HHcCCCEEEEC
Confidence 11 1223444445544 7888774 3444432 3434 67899999974
No 159
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=62.85 E-value=43 Score=32.19 Aligned_cols=117 Identities=12% Similarity=0.099 Sum_probs=66.4
Q ss_pred HHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecCh-hhhccHHHHHhhcCEEEEeCCCccccCCCC-CH
Q 012943 273 IKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESA-DSIPNLHSIISASDGAMVARGDLGAELPIE-DV 350 (453)
Q Consensus 273 I~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~-~gv~NldeI~~~sDgImIgRGDLg~elg~e-~v 350 (453)
++.+.+.|+|++.++=. ..++..++.+++++.|-+. +.-+ ++ ...+.+..|++.++|++--- .+.--.|.. .+
T Consensus 116 ~~~~~~aGvdgvii~Dl-p~ee~~~~~~~~~~~gl~~--i~li-aP~t~~eri~~i~~~~~gfvY~v-S~~GvTG~~~~~ 190 (267)
T 3vnd_A 116 YTKAQAAGVDSVLIADV-PVEESAPFSKAAKAHGIAP--IFIA-PPNADADTLKMVSEQGEGYTYLL-SRAGVTGTESKA 190 (267)
T ss_dssp HHHHHHHTCCEEEETTS-CGGGCHHHHHHHHHTTCEE--ECEE-CTTCCHHHHHHHHHHCCSCEEES-CCCCCC------
T ss_pred HHHHHHcCCCEEEeCCC-CHhhHHHHHHHHHHcCCeE--EEEE-CCCCCHHHHHHHHHhCCCcEEEE-ecCCCCCCccCC
Confidence 44556789999888743 3466777888887766442 2222 33 23578899998877443221 110011221 12
Q ss_pred HHHHHHHHHHHHHc-CCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEec
Q 012943 351 PLLQEDIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (453)
Q Consensus 351 ~~aqk~Ii~~c~~a-Gkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (453)
+.-....++..+++ ..|+++. .+.-|.. ++..++..|+|+++..
T Consensus 191 ~~~~~~~v~~vr~~~~~pv~vG---------fGI~~~e---~~~~~~~~gADgvVVG 235 (267)
T 3vnd_A 191 GEPIENILTQLAEFNAPPPLLG---------FGIAEPE---QVRAAIKAGAAGAISG 235 (267)
T ss_dssp --CHHHHHHHHHTTTCCCEEEC---------SSCCSHH---HHHHHHHTTCSEEEEC
T ss_pred cHHHHHHHHHHHHhcCCCEEEE---------CCcCCHH---HHHHHHHcCCCEEEEC
Confidence 22234555555554 6788873 4444433 3556788999999985
No 160
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=62.69 E-value=43 Score=29.84 Aligned_cols=108 Identities=15% Similarity=0.182 Sum_probs=62.3
Q ss_pred CHhhHHHH-HhhhhcCCcEEEecccc-CH-HHHHHHHHHHHhcCCCceEEE-EecChhhhccHHHHHhh-cCEEEEeCCC
Q 012943 266 TDKDWEDI-KFGVDNQVDFYAVSFVK-DA-KVVHELKDYLKSCNADIHVIV-KIESADSIPNLHSIISA-SDGAMVARGD 340 (453)
Q Consensus 266 tekD~~DI-~~a~~~gvd~I~lSfV~-sa-~dv~~v~~~L~~~~~~i~IIa-kIET~~gv~NldeI~~~-sDgImIgRGD 340 (453)
+..+...+ +...+.|+++|-+.+-. .+ +.+..+++.+. .+..+-+ .+.|++- +++..+. +|.+ ++++-
T Consensus 20 ~~~~~~~~~~~~~~~G~~~iev~~~~~~~~~~i~~ir~~~~---~~~~ig~~~v~~~~~---~~~a~~~Gad~i-v~~~~ 92 (205)
T 1wa3_A 20 SVEEAKEKALAVFEGGVHLIEITFTVPDADTVIKELSFLKE---KGAIIGAGTVTSVEQ---CRKAVESGAEFI-VSPHL 92 (205)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHTHHHHH---TTCEEEEESCCSHHH---HHHHHHHTCSEE-ECSSC
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCChhHHHHHHHHHHHCC---CCcEEEecccCCHHH---HHHHHHcCCCEE-EcCCC
Confidence 34444443 44567899999775422 11 22555555542 2333333 3344432 3333333 7999 77551
Q ss_pred ccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecC
Q 012943 341 LGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (453)
Q Consensus 341 Lg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 407 (453)
. ..+++.|++.|+|++.- ..|. +++..++..|+|.+-+..
T Consensus 93 -------~------~~~~~~~~~~g~~vi~g-----------~~t~---~e~~~a~~~Gad~vk~~~ 132 (205)
T 1wa3_A 93 -------D------EEISQFCKEKGVFYMPG-----------VMTP---TELVKAMKLGHTILKLFP 132 (205)
T ss_dssp -------C------HHHHHHHHHHTCEEECE-----------ECSH---HHHHHHHHTTCCEEEETT
T ss_pred -------C------HHHHHHHHHcCCcEECC-----------cCCH---HHHHHHHHcCCCEEEEcC
Confidence 1 46888899999998752 1232 346678999999998753
No 161
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=62.62 E-value=88 Score=28.14 Aligned_cols=133 Identities=17% Similarity=0.172 Sum_probs=65.7
Q ss_pred HHHHhhhhcCCcEEEecc--ccCHHHHHHHHHHHHhcCCC-ceE-----------EEEecCh------hhhccHHHHHhh
Q 012943 271 EDIKFGVDNQVDFYAVSF--VKDAKVVHELKDYLKSCNAD-IHV-----------IVKIESA------DSIPNLHSIISA 330 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lSf--V~sa~dv~~v~~~L~~~~~~-i~I-----------IakIET~------~gv~NldeI~~~ 330 (453)
++++.+++.|+|+|.+.. ..+++. +.++....+.+ +.+ .+++... ..++-+..+.+.
T Consensus 90 ~~~~~~~~~Gad~V~i~~~~~~~~~~---~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~~~~~~~~~~~~e~~~~~~~~ 166 (253)
T 1h5y_A 90 EDATTLFRAGADKVSVNTAAVRNPQL---VALLAREFGSQSTVVAIDAKWNGEYYEVYVKGGREATGLDAVKWAKEVEEL 166 (253)
T ss_dssp HHHHHHHHHTCSEEEESHHHHHCTHH---HHHHHHHHCGGGEEEEEEEEECSSSEEEEETTTTEEEEEEHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEChHHhhCcHH---HHHHHHHcCCCcEEEEEEeecCCCcEEEEEeCCeecCCCCHHHHHHHHHhC
Confidence 445566678999998753 223333 33444443422 211 2222211 122334444444
Q ss_pred -cCEEEEeCCCccc-cCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCc
Q 012943 331 -SDGAMVARGDLGA-ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGE 408 (453)
Q Consensus 331 -sDgImIgRGDLg~-elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~E 408 (453)
+|.|.+..-+..- ..++ .+ ...+++ ++..+.|++.. .+.-+. .|+..+...|+|++++..-
T Consensus 167 G~d~i~~~~~~~~g~~~~~-~~-~~i~~l---~~~~~~pvia~---------GGi~~~---~~~~~~~~~Ga~~v~vgsa 229 (253)
T 1h5y_A 167 GAGEILLTSIDRDGTGLGY-DV-ELIRRV---ADSVRIPVIAS---------GGAGRV---EHFYEAAAAGADAVLAASL 229 (253)
T ss_dssp TCSEEEEEETTTTTTCSCC-CH-HHHHHH---HHHCSSCEEEE---------SCCCSH---HHHHHHHHTTCSEEEESHH
T ss_pred CCCEEEEecccCCCCcCcC-CH-HHHHHH---HHhcCCCEEEe---------CCCCCH---HHHHHHHHcCCcHHHHHHH
Confidence 7888875433211 1122 21 122333 23347888874 333333 4566667789999998654
Q ss_pred ccCCCC-HHHHHHHHH
Q 012943 409 TAHGKF-PLKAVKVMH 423 (453)
Q Consensus 409 TA~G~y-P~eaV~~m~ 423 (453)
--.+.. +.++.++|.
T Consensus 230 l~~~~~~~~~~~~~l~ 245 (253)
T 1h5y_A 230 FHFRVLSIAQVKRYLK 245 (253)
T ss_dssp HHTTSSCHHHHHHHHH
T ss_pred HHcCCCCHHHHHHHHH
Confidence 334443 445555553
No 162
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=62.55 E-value=30 Score=33.94 Aligned_cols=99 Identities=8% Similarity=0.109 Sum_probs=56.7
Q ss_pred HHHHhhhhcCCcEEEec------cccCHHHHHH-HHHHHHhcCCCceEEEEe---cChhhhccHHHHHhh-cCEEEEeCC
Q 012943 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKI---ESADSIPNLHSIISA-SDGAMVARG 339 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lS------fV~sa~dv~~-v~~~L~~~~~~i~IIakI---ET~~gv~NldeI~~~-sDgImIgRG 339 (453)
+.+++.++.|+|+|.+. +.-+.++-.+ ++..++..+.+++||+-+ -|.++++......+. +|++++-+-
T Consensus 36 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 115 (318)
T 3qfe_A 36 RYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHINDASVAGANYVLVLPP 115 (318)
T ss_dssp HHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 44577789999998762 2223333333 344445567789999977 455666666555544 899999654
Q ss_pred CccccCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 012943 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (453)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~a 371 (453)
..-.- |. .-..+....-..|.+.+.|+++.
T Consensus 116 ~y~~k-p~-~~~~l~~~f~~ia~a~~lPiilY 145 (318)
T 3qfe_A 116 AYFGK-AT-TPPVIKSFFDDVSCQSPLPVVIY 145 (318)
T ss_dssp CC----CC-CHHHHHHHHHHHHHHCSSCEEEE
T ss_pred cccCC-CC-CHHHHHHHHHHHHhhCCCCEEEE
Confidence 22110 11 11223333344455668998876
No 163
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=62.52 E-value=97 Score=30.52 Aligned_cols=133 Identities=12% Similarity=0.166 Sum_probs=66.8
Q ss_pred CCCHhhHHHH--------HhhhhcCCcEEEecccc-------------C------------HHHHHHHHHHH-HhcCCCc
Q 012943 264 SITDKDWEDI--------KFGVDNQVDFYAVSFVK-------------D------------AKVVHELKDYL-KSCNADI 309 (453)
Q Consensus 264 ~ltekD~~DI--------~~a~~~gvd~I~lSfV~-------------s------------a~dv~~v~~~L-~~~~~~i 309 (453)
.||..|++.+ +.+.+.|+|+|=+.... . +.-+.++-+.+ +..+.+.
T Consensus 141 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~ 220 (349)
T 3hgj_A 141 PLDEAGMERILQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPREL 220 (349)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCc
Confidence 5788888777 23467899998764322 1 11122222223 2346677
Q ss_pred eEEEEecChh----h--hccHHHHHh----h-cCEEEEeCCCccccCCCCCHHHHHHHHHHHHH-HcCCCEEEEechhhh
Q 012943 310 HVIVKIESAD----S--IPNLHSIIS----A-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCR-SMQKPVIVATNMLES 377 (453)
Q Consensus 310 ~IIakIET~~----g--v~NldeI~~----~-sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~-~aGkpvi~aTqmLeS 377 (453)
.|..||---+ | ++...++++ . +|.|-+.-|........+.-+..+...++..+ ..+.|++..
T Consensus 221 pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~------ 294 (349)
T 3hgj_A 221 PLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGAV------ 294 (349)
T ss_dssp CEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCCEEEEC------
T ss_pred eEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcCceEEEE------
Confidence 7888885321 1 122222332 2 68887764433222110000001112222222 247888763
Q ss_pred hccCCCCchHHHHHHHHHHHhC-ccEEEecCc
Q 012943 378 MIDHPTPTRAEVSDIAIAVREG-ADAVMLSGE 408 (453)
Q Consensus 378 M~~~~~PtrAEv~Dv~nav~~G-~D~vmLs~E 408 (453)
...-+. .++..++..| +|.|++...
T Consensus 295 ---Ggi~t~---e~a~~~l~~G~aD~V~iGR~ 320 (349)
T 3hgj_A 295 ---GLITTP---EQAETLLQAGSADLVLLGRV 320 (349)
T ss_dssp ---SSCCCH---HHHHHHHHTTSCSEEEESTH
T ss_pred ---CCCCCH---HHHHHHHHCCCceEEEecHH
Confidence 222232 2344778888 999998643
No 164
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=62.45 E-value=32 Score=33.61 Aligned_cols=98 Identities=17% Similarity=0.173 Sum_probs=53.9
Q ss_pred HHHHhhhhcCCcEEEec------cccCHHHHHH-HHHHHHhcCCCceEEEEec--ChhhhccHHHHHhh-cCEEEEeCCC
Q 012943 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKIE--SADSIPNLHSIISA-SDGAMVARGD 340 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lS------fV~sa~dv~~-v~~~L~~~~~~i~IIakIE--T~~gv~NldeI~~~-sDgImIgRGD 340 (453)
+.+++.++.|+|+|.+. +.-+.++-.+ ++..++..+.+++||+-+= |.++++......+. +|++|+-+-.
T Consensus 37 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg~~t~~ai~la~~A~~~Gadavlv~~P~ 116 (316)
T 3e96_A 37 ETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIGYATSTAIELGNAAKAAGADAVMIHMPI 116 (316)
T ss_dssp HHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHHTCSEEEECCCC
T ss_pred HHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeCcCHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 44577789999998652 1223333333 3444555667899999873 33333333333333 7999986332
Q ss_pred ccccCCCCCHHHHHHHHHHHHHHcCCCEEEEe
Q 012943 341 LGAELPIEDVPLLQEDIIRRCRSMQKPVIVAT 372 (453)
Q Consensus 341 Lg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aT 372 (453)
.. ...-+.+...-+.| |.+.+.|+++.-
T Consensus 117 y~-~~s~~~l~~~f~~v---a~a~~lPiilYn 144 (316)
T 3e96_A 117 HP-YVTAGGVYAYFRDI---IEALDFPSLVYF 144 (316)
T ss_dssp CS-CCCHHHHHHHHHHH---HHHHTSCEEEEE
T ss_pred CC-CCCHHHHHHHHHHH---HHhCCCCEEEEe
Confidence 21 11112333333444 455579998874
No 165
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=62.44 E-value=38 Score=32.83 Aligned_cols=97 Identities=8% Similarity=0.048 Sum_probs=58.3
Q ss_pred HHHHhhhhcCCcEEEec------cccCHHHHHH-HHHHHHhcCCCceEEEEe---cChhhhccHHHHHhh-cCEEEEeCC
Q 012943 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKI---ESADSIPNLHSIISA-SDGAMVARG 339 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lS------fV~sa~dv~~-v~~~L~~~~~~i~IIakI---ET~~gv~NldeI~~~-sDgImIgRG 339 (453)
+.+++.++.|+|+|.+. +.-+.++-.+ ++..++..+.+++||+-+ -|.++++......+. +|++|+-+-
T Consensus 29 ~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 108 (300)
T 3eb2_A 29 RLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEKLGADGILAILE 108 (300)
T ss_dssp HHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred HHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 44467789999998642 2223333333 344445556788888876 466777766666555 899998754
Q ss_pred CccccCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 012943 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (453)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~a 371 (453)
...- ..-..+.+..-..|.+.+.|+++.
T Consensus 109 ~y~~----~~~~~l~~~f~~va~a~~lPiilY 136 (300)
T 3eb2_A 109 AYFP----LKDAQIESYFRAIADAVEIPVVIY 136 (300)
T ss_dssp CSSC----CCHHHHHHHHHHHHHHCSSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHHCCCCEEEE
Confidence 4321 122233334444466668998886
No 166
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=61.96 E-value=30 Score=33.89 Aligned_cols=97 Identities=10% Similarity=0.140 Sum_probs=58.3
Q ss_pred HHHHhhhhcCCcEEEec------cccCHHHHHH-HHHHHHhcCCCceEEEEec---ChhhhccHHHHHhh-cCEEEEeCC
Q 012943 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lS------fV~sa~dv~~-v~~~L~~~~~~i~IIakIE---T~~gv~NldeI~~~-sDgImIgRG 339 (453)
+.+++.++.|+|+|.+. +.-+.++-.+ ++..++..+.+++||+-+= |.++++......+. +|++|+-+-
T Consensus 48 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P 127 (314)
T 3qze_A 48 KLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTP 127 (314)
T ss_dssp HHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 44567789999998762 2223344333 3444555667899999774 56677666665555 899998754
Q ss_pred CccccCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 012943 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (453)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~a 371 (453)
...- ..-+.+. ...-..|.+.+.|+++.
T Consensus 128 ~y~~-~s~~~l~---~~f~~va~a~~lPiilY 155 (314)
T 3qze_A 128 YYNK-PTQEGMY---QHFRHIAEAVAIPQILY 155 (314)
T ss_dssp CSSC-CCHHHHH---HHHHHHHHHSCSCEEEE
T ss_pred CCCC-CCHHHHH---HHHHHHHHhcCCCEEEE
Confidence 3321 1112233 33333455568998886
No 167
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=61.81 E-value=91 Score=28.07 Aligned_cols=108 Identities=15% Similarity=0.184 Sum_probs=60.4
Q ss_pred CHhhHHHHHhhhhcCCcEEEec-cccCHHHHHHHHHHHHhcCCC-ceEEEEecChhhhccHHHHHhh-cCEEEEeCCCcc
Q 012943 266 TDKDWEDIKFGVDNQVDFYAVS-FVKDAKVVHELKDYLKSCNAD-IHVIVKIESADSIPNLHSIISA-SDGAMVARGDLG 342 (453)
Q Consensus 266 tekD~~DI~~a~~~gvd~I~lS-fV~sa~dv~~v~~~L~~~~~~-i~IIakIET~~gv~NldeI~~~-sDgImIgRGDLg 342 (453)
+..+.+++..+++.|+|+|.+. +--+.+++.++.+.+.+.+.. ..++. . +.++...+. +|++-++-.|+
T Consensus 28 ~~~~l~~~~~~~~~G~~~v~lr~~~~~~~~~~~~~~~l~~~~~~~~~l~v--~-----~~~~~a~~~gad~v~l~~~~~- 99 (221)
T 1yad_A 28 PVEELARIIITIQNEVDFIHIRERSKSAADILKLLDLIFEGGIDKRKLVM--N-----GRVDIALFSTIHRVQLPSGSF- 99 (221)
T ss_dssp CHHHHHHHHHHHGGGCSEEEECCTTSCHHHHHHHHHHHHHTTCCGGGEEE--E-----SCHHHHHTTTCCEEEECTTSC-
T ss_pred CcchHHHHHHHHHCCCCEEEEccCCCCHHHHHHHHHHHHHhcCcCCeEEE--e-----ChHHHHHHcCCCEEEeCCCcc-
Confidence 4444566888889999998763 223455555555555543321 13432 2 345544444 89999975553
Q ss_pred ccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecC
Q 012943 343 AELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (453)
Q Consensus 343 ~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 407 (453)
.+..+++ ... |+.+++.. .|.. ++..+...|+|.+++..
T Consensus 100 ------~~~~~~~-----~~~-~~~ig~sv-----------~t~~---~~~~a~~~gaD~i~~~~ 138 (221)
T 1yad_A 100 ------SPKQIRA-----RFP-HLHIGRSV-----------HSLE---EAVQAEKEDADYVLFGH 138 (221)
T ss_dssp ------CHHHHHH-----HCT-TCEEEEEE-----------CSHH---HHHHHHHTTCSEEEEEC
T ss_pred ------CHHHHHH-----HCC-CCEEEEEc-----------CCHH---HHHHHHhCCCCEEEECC
Confidence 1222211 112 66665532 1333 35567789999999965
No 168
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=61.70 E-value=11 Score=38.00 Aligned_cols=50 Identities=12% Similarity=0.218 Sum_probs=39.9
Q ss_pred cEEEEecCCCCCCHHHHHHHHHhCCcEEEeecCCCChHHHHHHHHHHHHH
Q 012943 101 TKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEY 150 (453)
Q Consensus 101 TKIi~TiGPss~s~e~i~~Li~aGmnvaRiNfSHg~~e~~~~~I~~iR~a 150 (453)
..+.+.+|+.....+.++.++++|+++.=||++||+++...+.++.+|+.
T Consensus 142 ~~~~~~i~~~~~~~~~a~~~~~~G~d~i~i~~~~g~~~~~~e~i~~ir~~ 191 (404)
T 1eep_A 142 LRVGAAVSIDIDTIERVEELVKAHVDILVIDSAHGHSTRIIELIKKIKTK 191 (404)
T ss_dssp BCCEEEECSCTTHHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHH
T ss_pred ceEEEEeCCChhHHHHHHHHHHCCCCEEEEeCCCCChHHHHHHHHHHHHH
Confidence 44677777655567889999999999999999999987777777777753
No 169
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=61.58 E-value=1.3e+02 Score=29.61 Aligned_cols=150 Identities=11% Similarity=0.016 Sum_probs=87.3
Q ss_pred CCCHhhHHHH-HhhhhcCCcEEEe-----ccccC-------HHHHHHHHHHHHhcCCCceEEEEe-cChhhhccHHHHHh
Q 012943 264 SITDKDWEDI-KFGVDNQVDFYAV-----SFVKD-------AKVVHELKDYLKSCNADIHVIVKI-ESADSIPNLHSIIS 329 (453)
Q Consensus 264 ~ltekD~~DI-~~a~~~gvd~I~l-----SfV~s-------a~dv~~v~~~L~~~~~~i~IIakI-ET~~gv~NldeI~~ 329 (453)
.++..++..| +...+.|+|.|=+ ++..+ +.+...++...+ ...++++.+.. -...-.+.++..++
T Consensus 26 ~~~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~-~~~~~~i~~l~~p~~~~~~~i~~a~~ 104 (345)
T 1nvm_A 26 QYTLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAG-EISHAQIATLLLPGIGSVHDLKNAYQ 104 (345)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHT-TCSSSEEEEEECBTTBCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHh-hCCCCEEEEEecCCcccHHHHHHHHh
Confidence 3566776555 4456789999988 33322 344444555443 33566776663 21111233444443
Q ss_pred h-cCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHH-HHHhCccEEEecC
Q 012943 330 A-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI-AVREGADAVMLSG 407 (453)
Q Consensus 330 ~-sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~n-av~~G~D~vmLs~ 407 (453)
+ .|++.|. ++..++ .....+++.|+++|+.+...- + ..+.-+...+.+++. +...|+|++-|.
T Consensus 105 aGvd~v~I~-------~~~s~~-~~~~~~i~~ak~~G~~v~~~~---~---~a~~~~~e~~~~ia~~~~~~Ga~~i~l~- 169 (345)
T 1nvm_A 105 AGARVVRVA-------THCTEA-DVSKQHIEYARNLGMDTVGFL---M---MSHMIPAEKLAEQGKLMESYGATCIYMA- 169 (345)
T ss_dssp HTCCEEEEE-------EETTCG-GGGHHHHHHHHHHTCEEEEEE---E---STTSSCHHHHHHHHHHHHHHTCSEEEEE-
T ss_pred CCcCEEEEE-------EeccHH-HHHHHHHHHHHHCCCEEEEEE---E---eCCCCCHHHHHHHHHHHHHCCCCEEEEC-
Confidence 3 6887774 122222 234677888999999987751 1 122333344556555 445689999985
Q ss_pred cccCCCCHHHHHHHHHHHHHHH
Q 012943 408 ETAHGKFPLKAVKVMHTVALRT 429 (453)
Q Consensus 408 ETA~G~yP~eaV~~m~~I~~~a 429 (453)
+|.=...|-++-+.+..+..+.
T Consensus 170 DT~G~~~P~~v~~lv~~l~~~~ 191 (345)
T 1nvm_A 170 DSGGAMSMNDIRDRMRAFKAVL 191 (345)
T ss_dssp CTTCCCCHHHHHHHHHHHHHHS
T ss_pred CCcCccCHHHHHHHHHHHHHhc
Confidence 5555556988888888887665
No 170
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=61.56 E-value=80 Score=28.23 Aligned_cols=103 Identities=12% Similarity=0.151 Sum_probs=60.6
Q ss_pred HHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEE-EEecChhhhccHHHHHhh-cCEEEEeCCCccccCCCC
Q 012943 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVI-VKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIE 348 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~II-akIET~~gv~NldeI~~~-sDgImIgRGDLg~elg~e 348 (453)
+.++.+.+.|+++|-+-. .++..+..++++....+..+.|= ..+.+. +.++..++. +|++.++-.|
T Consensus 23 ~~~~~~~~~G~~~i~l~~-~~~~~~~~i~~i~~~~~~~l~vg~g~~~~~---~~i~~a~~~Gad~V~~~~~~-------- 90 (212)
T 2v82_A 23 AHVGAVIDAGFDAVEIPL-NSPQWEQSIPAIVDAYGDKALIGAGTVLKP---EQVDALARMGCQLIVTPNIH-------- 90 (212)
T ss_dssp HHHHHHHHHTCCEEEEET-TSTTHHHHHHHHHHHHTTTSEEEEECCCSH---HHHHHHHHTTCCEEECSSCC--------
T ss_pred HHHHHHHHCCCCEEEEeC-CChhHHHHHHHHHHhCCCCeEEEeccccCH---HHHHHHHHcCCCEEEeCCCC--------
Confidence 334556788999987743 34555666666555444333321 123333 345555554 7998743211
Q ss_pred CHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEe
Q 012943 349 DVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVML 405 (453)
Q Consensus 349 ~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmL 405 (453)
..+++.+++.|.++++. ..|..| +..+...|+|.+.+
T Consensus 91 ------~~~~~~~~~~g~~~~~g-----------~~t~~e---~~~a~~~G~d~v~v 127 (212)
T 2v82_A 91 ------SEVIRRAVGYGMTVCPG-----------CATATE---AFTALEAGAQALKI 127 (212)
T ss_dssp ------HHHHHHHHHTTCEEECE-----------ECSHHH---HHHHHHTTCSEEEE
T ss_pred ------HHHHHHHHHcCCCEEee-----------cCCHHH---HHHHHHCCCCEEEE
Confidence 24567888999887653 123334 34667899999987
No 171
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=61.33 E-value=13 Score=37.48 Aligned_cols=46 Identities=26% Similarity=0.340 Sum_probs=35.8
Q ss_pred EEEecCCCCCCHHHHHHHHHhCCcEEEeecCCCChHHHHHHHHHHHHH
Q 012943 103 IVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEY 150 (453)
Q Consensus 103 Ii~TiGPss~s~e~i~~Li~aGmnvaRiNfSHg~~e~~~~~I~~iR~a 150 (453)
+.+-+|... .+.++.++++|++++=||++||+.+.+.+.++.+|+.
T Consensus 98 vga~ig~~~--~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~ 143 (361)
T 3khj_A 98 VGAAIGVNE--IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSK 143 (361)
T ss_dssp CEEEECTTC--HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHHH
T ss_pred EEEEeCCCH--HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHHh
Confidence 344455433 8999999999999999999999987777777666653
No 172
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=61.02 E-value=31 Score=32.37 Aligned_cols=102 Identities=16% Similarity=0.221 Sum_probs=59.2
Q ss_pred HhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh-cCEEEEeCCCccccCCCCCHHH
Q 012943 274 KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIEDVPL 352 (453)
Q Consensus 274 ~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~-sDgImIgRGDLg~elg~e~v~~ 352 (453)
+..++.|++.|=+++ +++.-+..++.+-++. .+..|-| -|..-.+.++..+++ ++-|+ .|+
T Consensus 32 ~al~~gGi~~iEvt~-~t~~a~~~I~~l~~~~-p~~~IGA--GTVlt~~~a~~ai~AGA~fiv-sP~------------- 93 (217)
T 3lab_A 32 KALVAGGVHLLEVTL-RTEAGLAAISAIKKAV-PEAIVGA--GTVCTADDFQKAIDAGAQFIV-SPG------------- 93 (217)
T ss_dssp HHHHHTTCCEEEEET-TSTTHHHHHHHHHHHC-TTSEEEE--ECCCSHHHHHHHHHHTCSEEE-ESS-------------
T ss_pred HHHHHcCCCEEEEeC-CCccHHHHHHHHHHHC-CCCeEee--ccccCHHHHHHHHHcCCCEEE-eCC-------------
Confidence 445667788777776 4555555555443333 2333333 344444444444444 44443 333
Q ss_pred HHHHHHHHHHHcCC------CEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecC
Q 012943 353 LQEDIIRRCRSMQK------PVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (453)
Q Consensus 353 aqk~Ii~~c~~aGk------pvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 407 (453)
.-.++++.|+++|. |++=- .-| .+++..+...|+|.+=+.-
T Consensus 94 ~~~evi~~~~~~~v~~~~~~~~~PG-----------~~T---ptE~~~A~~~Gad~vK~FP 140 (217)
T 3lab_A 94 LTPELIEKAKQVKLDGQWQGVFLPG-----------VAT---ASEVMIAAQAGITQLKCFP 140 (217)
T ss_dssp CCHHHHHHHHHHHHHCSCCCEEEEE-----------ECS---HHHHHHHHHTTCCEEEETT
T ss_pred CcHHHHHHHHHcCCCccCCCeEeCC-----------CCC---HHHHHHHHHcCCCEEEECc
Confidence 23578899999999 86531 122 4457789999999998753
No 173
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=60.46 E-value=11 Score=34.78 Aligned_cols=60 Identities=18% Similarity=0.282 Sum_probs=43.7
Q ss_pred eeecCCCEEEEEeec--CC---CCccEEEeccccccc--ccccCCEEEEe--CCeeEEEEEEEeCCeEE
Q 012943 179 IILKEGQEFNFTIKR--GV---STEDTVSVNYDDFVN--DVEVGDILLVD--GGMMSLAVKSKTKDLVK 238 (453)
Q Consensus 179 i~L~~G~~v~lt~~~--~~---~~~~~I~v~~~~l~~--~vk~Gd~IlID--DG~I~L~V~ev~~~~v~ 238 (453)
.-++.|++++|+... .+ .......++...|.. .+++|+.+.+. +|.+..+|++++++.|+
T Consensus 50 ~Gm~vGe~~~v~Ippe~aYGe~~~~lV~~vp~~~f~~~~~~~~G~~~~~~~~~G~~~~~V~~v~~~~V~ 118 (196)
T 2kfw_A 50 EGHEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQGPVPVEITAVEDDHVV 118 (196)
T ss_dssp SSSCTTCEEEEECSTTTTSSCCCTTTCEEECGGGCCCSSCCCTTCEEEEEETTEEEEEEBCCCCSSSEE
T ss_pred cCCCCCCEEEEEeCcHHhcCCCChhhEEEEEHHHCCCccCcccCCEEEEECCCCcEEEEEEEEcCCEEE
Confidence 347899999998763 22 233456677667764 58999999997 56677778888887765
No 174
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=60.30 E-value=1.1e+02 Score=30.47 Aligned_cols=126 Identities=14% Similarity=0.120 Sum_probs=64.6
Q ss_pred CCCHhhHHHH--------HhhhhcCCcEEEecc-------------ccCHHH------------HHHHHHHHH-hcCCCc
Q 012943 264 SITDKDWEDI--------KFGVDNQVDFYAVSF-------------VKDAKV------------VHELKDYLK-SCNADI 309 (453)
Q Consensus 264 ~ltekD~~DI--------~~a~~~gvd~I~lSf-------------V~sa~d------------v~~v~~~L~-~~~~~i 309 (453)
.||..|++.+ +.+.+.|+|+|=+.. .+...| +.++-+.+. ..+.+
T Consensus 150 ~mt~~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~- 228 (364)
T 1vyr_A 150 ALELDEIPGIVNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSAD- 228 (364)
T ss_dssp ECCGGGHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGG-
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCC-
Confidence 4677777555 233678999998732 222222 222222232 23445
Q ss_pred eEEEEecCh---h-------hhccHHHHHhh-----cCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEech
Q 012943 310 HVIVKIESA---D-------SIPNLHSIISA-----SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNM 374 (453)
Q Consensus 310 ~IIakIET~---~-------gv~NldeI~~~-----sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqm 374 (453)
.|..||-.- . .++...++++. +|.|-+..+.....-+ ..+. .+-...+..++|++..
T Consensus 229 ~v~vrls~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~-~~~~----~~~~v~~~~~iPvi~~--- 300 (364)
T 1vyr_A 229 RIGIRVSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGGKP-YSEA----FRQKVRERFHGVIIGA--- 300 (364)
T ss_dssp GEEEEECCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCC-CCHH----HHHHHHHHCCSEEEEE---
T ss_pred cEEEEEccccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCCCc-ccHH----HHHHHHHHCCCCEEEE---
Confidence 688888432 2 22233333432 6888776543311111 1121 1222234457888774
Q ss_pred hhhhccCCCCchHHHHHHHHHHHhC-ccEEEecCc
Q 012943 375 LESMIDHPTPTRAEVSDIAIAVREG-ADAVMLSGE 408 (453)
Q Consensus 375 LeSM~~~~~PtrAEv~Dv~nav~~G-~D~vmLs~E 408 (453)
... +. .+...++..| +|+|++...
T Consensus 301 ------Ggi-t~---~~a~~~l~~g~aD~V~~gR~ 325 (364)
T 1vyr_A 301 ------GAY-TA---EKAEDLIGKGLIDAVAFGRD 325 (364)
T ss_dssp ------SSC-CH---HHHHHHHHTTSCSEEEESHH
T ss_pred ------CCc-CH---HHHHHHHHCCCccEEEECHH
Confidence 223 43 3455778888 999999644
No 175
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=60.25 E-value=76 Score=30.65 Aligned_cols=97 Identities=13% Similarity=0.146 Sum_probs=57.1
Q ss_pred HHHHhhhhcCCcEEEec------cccCHHHHHH-HHHHHHhcCC-CceEEEEec---ChhhhccHHHHHhh-cCEEEEeC
Q 012943 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNA-DIHVIVKIE---SADSIPNLHSIISA-SDGAMVAR 338 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lS------fV~sa~dv~~-v~~~L~~~~~-~i~IIakIE---T~~gv~NldeI~~~-sDgImIgR 338 (453)
+.+++.++.|+|+|.+. +.-+.++-.+ ++...+..+. +++||+-+= |.++++......+. +|++|+-+
T Consensus 32 ~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 111 (301)
T 3m5v_A 32 RLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGADGILSVA 111 (301)
T ss_dssp HHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 44567789999998762 2223333333 3444455567 899999773 55666666555544 79999875
Q ss_pred CCccccCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 012943 339 GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (453)
Q Consensus 339 GDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~a 371 (453)
-...- ..-..+.+..-..|.+.+.|+++.
T Consensus 112 P~y~~----~s~~~l~~~f~~va~a~~lPiilY 140 (301)
T 3m5v_A 112 PYYNK----PTQQGLYEHYKAIAQSVDIPVLLY 140 (301)
T ss_dssp CCSSC----CCHHHHHHHHHHHHHHCSSCEEEE
T ss_pred CCCCC----CCHHHHHHHHHHHHHhCCCCEEEE
Confidence 44321 111223333334455568888875
No 176
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=60.19 E-value=71 Score=30.09 Aligned_cols=123 Identities=11% Similarity=0.064 Sum_probs=70.1
Q ss_pred hhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh----cCEEEEeCC---Cccc---cC
Q 012943 276 GVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA----SDGAMVARG---DLGA---EL 345 (453)
Q Consensus 276 a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~----sDgImIgRG---DLg~---el 345 (453)
+...|+|+|=++- +.-.+..+++++ +....|-+-+ .+.+|+..+ +|.|.+|+- +.-. .+
T Consensus 108 A~~~gAdGVHLg~--~dl~~~~~r~~~---~~~~~iG~S~------ht~~Ea~~A~~~GaDyI~vgpvf~T~tK~~~~~~ 176 (243)
T 3o63_A 108 ARAAGADVLHLGQ--RDLPVNVARQIL---APDTLIGRST------HDPDQVAAAAAGDADYFCVGPCWPTPTKPGRAAP 176 (243)
T ss_dssp HHHHTCSEEEECT--TSSCHHHHHHHS---CTTCEEEEEE------CSHHHHHHHHHSSCSEEEECCSSCCCC-----CC
T ss_pred HHHhCCCEEEecC--CcCCHHHHHHhh---CCCCEEEEeC------CCHHHHHHHhhCCCCEEEEcCccCCCCCCCcchh
Confidence 5567889887763 222344555554 3343444433 444554433 799999862 1111 12
Q ss_pred CCCCHHHHHHHHHHHHHH--cCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccCCCCHHHHHHHHH
Q 012943 346 PIEDVPLLQEDIIRRCRS--MQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMH 423 (453)
Q Consensus 346 g~e~v~~aqk~Ii~~c~~--aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~ 423 (453)
|++.+ ++ .+.. ..+|++.. .+. +.. ++..+...|+|++.+.+.--.-.-|.++++.+.
T Consensus 177 gl~~l----~~---~~~~~~~~iPvvAi---------GGI-~~~---ni~~~~~aGa~gvav~sai~~a~dp~~a~~~l~ 236 (243)
T 3o63_A 177 GLGLV----RV---AAELGGDDKPWFAI---------GGI-NAQ---RLPAVLDAGARRIVVVRAITSADDPRAAAEQLR 236 (243)
T ss_dssp CHHHH----HH---HHTC---CCCEEEE---------SSC-CTT---THHHHHHTTCCCEEESHHHHTCSSHHHHHHHHH
T ss_pred hHHHH----HH---HHHhccCCCCEEEe---------cCC-CHH---HHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHH
Confidence 21111 12 2222 37887764 333 332 355677889999998766556678999999998
Q ss_pred HHHHHH
Q 012943 424 TVALRT 429 (453)
Q Consensus 424 ~I~~~a 429 (453)
+.+.++
T Consensus 237 ~~~~~~ 242 (243)
T 3o63_A 237 SALTAA 242 (243)
T ss_dssp HHHHTC
T ss_pred HHHHhc
Confidence 877543
No 177
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=60.02 E-value=27 Score=33.96 Aligned_cols=68 Identities=24% Similarity=0.326 Sum_probs=50.3
Q ss_pred CcEEEEecCCCCC---------C----HHHHHHHHHhCCcEEEeec-CC--C-----ChHHHHHHHHHHHHHHhhcCCCc
Q 012943 100 KTKIVCTIGPSTS---------S----REMIWKLAEEGMNVARLNM-SH--G-----DHASHQKTIDLVKEYNSQFEDKA 158 (453)
Q Consensus 100 ~TKIi~TiGPss~---------s----~e~i~~Li~aGmnvaRiNf-SH--g-----~~e~~~~~I~~iR~a~~~~~~~~ 158 (453)
+++||+-|.+.-+ + .+..++|+++|.++.=+|. |- | ..+++++++..|+.+.++.+
T Consensus 14 ~~~imGilN~TpdSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~--- 90 (282)
T 1aj0_A 14 HPHVMGILNVTPDSFSDGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFE--- 90 (282)
T ss_dssp SCEEEEEEECCTTTSCCCCCCTHHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCC---
T ss_pred CCEEEEEEeCCCCccccccccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcC---
Confidence 5788888865432 1 2346779999999999998 53 2 16888889999988877654
Q ss_pred EEEEeecCCCee
Q 012943 159 VAIMLDTKGPEV 170 (453)
Q Consensus 159 iaIllDLkGPkI 170 (453)
+.|.+|+.-|++
T Consensus 91 ~piSIDT~~~~v 102 (282)
T 1aj0_A 91 VWISVDTSKPEV 102 (282)
T ss_dssp CEEEEECCCHHH
T ss_pred CeEEEeCCCHHH
Confidence 567889988764
No 178
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=59.97 E-value=53 Score=31.67 Aligned_cols=98 Identities=7% Similarity=0.091 Sum_probs=59.3
Q ss_pred HHHHhhhhcCCcEEEe------ccccCHHHHHHH-HHHHHhcCCCceEEEEec---ChhhhccHHHHHhh-cCEEEEeCC
Q 012943 271 EDIKFGVDNQVDFYAV------SFVKDAKVVHEL-KDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~l------SfV~sa~dv~~v-~~~L~~~~~~i~IIakIE---T~~gv~NldeI~~~-sDgImIgRG 339 (453)
+.+++.++.|+|+|.+ ++.-+.++-.++ +...+..+.+++||+-+= |.++++......+. +|++|+-+-
T Consensus 28 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 107 (294)
T 3b4u_A 28 AHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAGARNILLAPP 107 (294)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 5557788999999876 233444444444 444455567889999874 46677666655544 899999765
Q ss_pred CccccCCCCCHHHHHHHHHHHHHHc---CCCEEEE
Q 012943 340 DLGAELPIEDVPLLQEDIIRRCRSM---QKPVIVA 371 (453)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~a---Gkpvi~a 371 (453)
.+.-...-+.+...-+. .|.+. +.|+++.
T Consensus 108 ~y~~~~s~~~l~~~f~~---va~a~p~~~lPiilY 139 (294)
T 3b4u_A 108 SYFKNVSDDGLFAWFSA---VFSKIGKDARDILVY 139 (294)
T ss_dssp CSSCSCCHHHHHHHHHH---HHHHHCTTCCCEEEE
T ss_pred cCCCCCCHHHHHHHHHH---HHHhcCCCCCcEEEE
Confidence 44321111223333333 35556 7898875
No 179
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=59.85 E-value=13 Score=39.09 Aligned_cols=51 Identities=14% Similarity=0.236 Sum_probs=42.3
Q ss_pred CCcEEEEecCCCCCCHHHHHHHHHhCCcEEEeecCCCChHHHHHHHHHHHH
Q 012943 99 RKTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKE 149 (453)
Q Consensus 99 r~TKIi~TiGPss~s~e~i~~Li~aGmnvaRiNfSHg~~e~~~~~I~~iR~ 149 (453)
.+..+-+.+|+..+..+.++.|+++|+++.=+|.+||..+.+.++++.+|+
T Consensus 243 ~rl~V~aavg~~~d~~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~ 293 (511)
T 3usb_A 243 GRLLVGAAVGVTADAMTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRA 293 (511)
T ss_dssp SCBCCEEEECSSTTHHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHH
T ss_pred cceeeeeeeeeccchHHHHHHHHhhccceEEecccccchhhhhhHHHHHHH
Confidence 345677788888788999999999999999999999988777776666664
No 180
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=59.60 E-value=82 Score=29.09 Aligned_cols=145 Identities=17% Similarity=0.115 Sum_probs=84.0
Q ss_pred HHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEe-c------C----hhhhccHHHHHhh-----cCEE
Q 012943 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKI-E------S----ADSIPNLHSIISA-----SDGA 334 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakI-E------T----~~gv~NldeI~~~-----sDgI 334 (453)
+.++.+.+.|.|+|-+....-..++.++++.+.+.|-.+..+.-- . . .++++.+.+.+.. ++.|
T Consensus 42 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gl~v~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lGa~~v 121 (287)
T 3kws_A 42 EKLDFMEKLGVVGFEPGGGGLAGRVNEIKQALNGRNIKVSAICAGFKGFILSTDPAIRKECMDTMKEIIAAAGELGSTGV 121 (287)
T ss_dssp HHHHHHHHTTCCEEECBSTTCGGGHHHHHHHHTTSSCEECEEECCCCSCTTBSSHHHHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHcCCCEEEecCCchHHHHHHHHHHHHHcCCeEEEEecCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEE
Confidence 556777889999999887766788999999998766443322210 0 1 1234444444443 4677
Q ss_pred EEeCCCccc--cCC-----CCCHHHHHHHHHHHHHHcCCCEEEEechhhhhc---cCCCCchHHHHHHHHHHHhCccEEE
Q 012943 335 MVARGDLGA--ELP-----IEDVPLLQEDIIRRCRSMQKPVIVATNMLESMI---DHPTPTRAEVSDIAIAVREGADAVM 404 (453)
Q Consensus 335 mIgRGDLg~--elg-----~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~---~~~~PtrAEv~Dv~nav~~G~D~vm 404 (453)
.+..|.-.. ..+ ++.+....+++...|.++|..+.+ |-+- .....+..++.++...+. .+.+-
T Consensus 122 ~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~l~l-----E~~~~~~~~~~~~~~~~~~ll~~v~--~~~vg 194 (287)
T 3kws_A 122 IIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGTSVIF-----EPLNRKECFYLRQVADAASLCRDIN--NPGVR 194 (287)
T ss_dssp EECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCCEEE-----CCCCTTTCSSCCCHHHHHHHHHHHC--CTTEE
T ss_pred EEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEE-----EecCcccCcccCCHHHHHHHHHHcC--CCCee
Confidence 776552211 111 123455567888889999988766 3221 222445556666655552 33343
Q ss_pred ecCccc----CCCCHHHHHHHH
Q 012943 405 LSGETA----HGKFPLKAVKVM 422 (453)
Q Consensus 405 Ls~ETA----~G~yP~eaV~~m 422 (453)
+.-+|. .|.-|.+.++.+
T Consensus 195 ~~~D~~h~~~~g~d~~~~l~~~ 216 (287)
T 3kws_A 195 CMGDFWHMTWEETSDMGAFISG 216 (287)
T ss_dssp EEEEHHHHHHHCSCHHHHHHHH
T ss_pred EEeehHHHHhcCCCHHHHHHHh
Confidence 433433 377777776654
No 181
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=59.60 E-value=34 Score=33.49 Aligned_cols=57 Identities=19% Similarity=0.232 Sum_probs=40.6
Q ss_pred HHHcCCCEEE-EechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccCCCCHHHHHHHHHHHHHH
Q 012943 361 CRSMQKPVIV-ATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALR 428 (453)
Q Consensus 361 c~~aGkpvi~-aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~ 428 (453)
+.....|+++ | ..+.-+. .|+..+...|+|++++..---....|.++++.|...+.+
T Consensus 203 ~~~~~iPVivvA--------~GGI~t~---~dv~~~~~~GAdgVlVGsai~~a~dp~~~~~~l~~ai~~ 260 (297)
T 4adt_A 203 RKLKRLPVVNFA--------AGGIATP---ADAAMCMQLGMDGVFVGSGIFESENPQKMASSIVMAVSN 260 (297)
T ss_dssp HHHTSCSSEEEE--------ESCCCSH---HHHHHHHHTTCSCEEESHHHHTSSCHHHHHHHHHHHHHT
T ss_pred HHhcCCCeEEEe--------cCCCCCH---HHHHHHHHcCCCEEEEhHHHHcCCCHHHHHHHHHHHHHh
Confidence 3445788863 4 4555554 456777888999999975545667899999988877654
No 182
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=59.49 E-value=24 Score=36.36 Aligned_cols=100 Identities=11% Similarity=0.078 Sum_probs=56.7
Q ss_pred CCCCHhhHHHH-HhhhhcCCcEEEeccccC---------------------HHHHHHHHHHHHhcCCCceEEE--EecCh
Q 012943 263 PSITDKDWEDI-KFGVDNQVDFYAVSFVKD---------------------AKVVHELKDYLKSCNADIHVIV--KIESA 318 (453)
Q Consensus 263 p~ltekD~~DI-~~a~~~gvd~I~lSfV~s---------------------a~dv~~v~~~L~~~~~~i~IIa--kIET~ 318 (453)
|.+++.+..++ +.+.+.|+|+|.++-.-. +..++.+++.-+..+.+++||+ =|.|.
T Consensus 278 pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~s~ 357 (415)
T 3i65_A 278 PDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSG 357 (415)
T ss_dssp SCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEECSSCCSH
T ss_pred CCCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEECCCCCH
Confidence 56777777666 445689999999875311 1122334443344455788886 35554
Q ss_pred hhhccHHHHHhhcCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCC
Q 012943 319 DSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQK 366 (453)
Q Consensus 319 ~gv~NldeI~~~sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGk 366 (453)
+-+ ++-|..-+|+++|||+=+.- |..-+..+.+.+.....+.|.
T Consensus 358 eDa--~e~l~aGAd~VqIgra~l~~--GP~~~~~i~~~L~~~l~~~G~ 401 (415)
T 3i65_A 358 LDA--LEKIEAGASVCQLYSCLVFN--GMKSAVQIKRELNHLLYQRGY 401 (415)
T ss_dssp HHH--HHHHHHTEEEEEESHHHHHH--GGGHHHHHHHHHHHHHHHTTC
T ss_pred HHH--HHHHHcCCCEEEEcHHHHhc--CHHHHHHHHHHHHHHHHHcCC
Confidence 333 22222238999999975522 333344555555555555554
No 183
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=59.47 E-value=1.4e+02 Score=29.34 Aligned_cols=37 Identities=14% Similarity=0.149 Sum_probs=29.7
Q ss_pred HHHHHHhCccEEEecCcccCCCCHHHHHHHHHHHHHH
Q 012943 392 IAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALR 428 (453)
Q Consensus 392 v~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~ 428 (453)
...++..|+|.++...--....-|.++++.+++.+.+
T Consensus 216 ~~~a~~aGAd~iVvGr~I~~a~dp~~a~~~i~~~i~~ 252 (303)
T 3ru6_A 216 LAMARENLSDYIVVGRPIYKNENPRAVCEKILNKIHR 252 (303)
T ss_dssp HHHHHHTTCSEEEECHHHHTSSCHHHHHHHHHHHHC-
T ss_pred HHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHHHHh
Confidence 5678899999999877666778999999888876654
No 184
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=59.41 E-value=1e+02 Score=30.35 Aligned_cols=97 Identities=10% Similarity=0.039 Sum_probs=57.7
Q ss_pred HHHHhhhhcCCcEEEe------ccccCHHHHHH-HHHHHHhcCCCceEEEEec---ChhhhccHHHHHhh-cCEEEEeCC
Q 012943 271 EDIKFGVDNQVDFYAV------SFVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~l------SfV~sa~dv~~-v~~~L~~~~~~i~IIakIE---T~~gv~NldeI~~~-sDgImIgRG 339 (453)
+.+++.++.|+|+|.+ ++.-+.++-.+ ++..++..+.+++||+-+= |.++++......+. +|++++.+-
T Consensus 59 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P 138 (332)
T 2r8w_A 59 ALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAAGADALLLAPV 138 (332)
T ss_dssp HHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 4457778999999876 22334444333 4444555667899999874 46677666655544 899999654
Q ss_pred CccccCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 012943 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (453)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~a 371 (453)
.+.- ..-+.+...-+. .|.+.+.|+++.
T Consensus 139 ~Y~~-~s~~~l~~~f~~---VA~a~~lPiilY 166 (332)
T 2r8w_A 139 SYTP-LTQEEAYHHFAA---VAGATALPLAIY 166 (332)
T ss_dssp CSSC-CCHHHHHHHHHH---HHHHCSSCEEEE
T ss_pred CCCC-CCHHHHHHHHHH---HHHhcCCCEEEE
Confidence 4321 111223333333 355667888875
No 185
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=59.00 E-value=20 Score=35.16 Aligned_cols=67 Identities=18% Similarity=0.285 Sum_probs=44.5
Q ss_pred cCEEEEeCC-----CccccCCC--CCHHHHHHHHHHHHHHcCCCEEEEechhhhhccC-CCCchHHHHHHHHHHHh--Cc
Q 012943 331 SDGAMVARG-----DLGAELPI--EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDH-PTPTRAEVSDIAIAVRE--GA 400 (453)
Q Consensus 331 sDgImIgRG-----DLg~elg~--e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~-~~PtrAEv~Dv~nav~~--G~ 400 (453)
.|.|.+-+| ..|..... ++-+....++.+++++..+-+++- .+. |.-+ -.|++.++.. |+
T Consensus 184 pDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvivL-------c~gGpIst---peDv~~~l~~t~G~ 253 (286)
T 2p10_A 184 ADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIIL-------SHGGPIAN---PEDARFILDSCQGC 253 (286)
T ss_dssp CSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHCSCCEEE-------EESTTCCS---HHHHHHHHHHCTTC
T ss_pred CCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEEE-------ecCCCCCC---HHHHHHHHhcCCCc
Confidence 788888776 44554443 344667889999999998776663 244 4444 5578888888 99
Q ss_pred cEEEecC
Q 012943 401 DAVMLSG 407 (453)
Q Consensus 401 D~vmLs~ 407 (453)
|+++..+
T Consensus 254 ~G~~gAS 260 (286)
T 2p10_A 254 HGFYGAS 260 (286)
T ss_dssp CEEEESH
T ss_pred cEEEeeh
Confidence 9999853
No 186
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=58.83 E-value=62 Score=29.98 Aligned_cols=128 Identities=15% Similarity=0.073 Sum_probs=58.1
Q ss_pred HHHHHhhhhcCCcEEEeccccCHH--HHHHHHHHHHhcC--C-CceEE--E-------EecChhh--------hccHHHH
Q 012943 270 WEDIKFGVDNQVDFYAVSFVKDAK--VVHELKDYLKSCN--A-DIHVI--V-------KIESADS--------IPNLHSI 327 (453)
Q Consensus 270 ~~DI~~a~~~gvd~I~lSfV~sa~--dv~~v~~~L~~~~--~-~i~II--a-------kIET~~g--------v~NldeI 327 (453)
.+++..+++.|+|+|.+.-.---. +...+++++...+ . .+.+- + .+++... .+-+..+
T Consensus 86 ~~~i~~~~~~Gad~v~lg~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~d~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~ 165 (266)
T 2w6r_A 86 MEHFLEAFLAGADKALAASVFHFREIDMRELKEYLKKHGGSGQAVVVAIDAKRVDGEFMVFTHSGKKNTGILLRDWVVEV 165 (266)
T ss_dssp THHHHHHHHHTCSEEECCCCC------CHHHHHHCC----CCCEEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHH
T ss_pred HHHHHHHHHcCCcHhhhhHHHHhCCCCHHHHHHHHHHcCCCCCEEEEEEEEEecCCCEEEEECCCceecchhHHHHHHHH
Confidence 345666667899998886321101 4445556554444 2 21111 1 2333211 1222333
Q ss_pred Hhh-cCEEEEeC--CCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEE
Q 012943 328 ISA-SDGAMVAR--GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVM 404 (453)
Q Consensus 328 ~~~-sDgImIgR--GDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vm 404 (453)
... ++.|++-. .|. ...|+ .+ ...++ .+...+.|++.. .+.-+.. |+..+...|+|+++
T Consensus 166 ~~~G~~~i~~t~~~~~g-~~~g~-~~-~~i~~---l~~~~~ipvia~---------GGI~~~e---d~~~~~~~Gadgv~ 227 (266)
T 2w6r_A 166 EKRGAGEILLTSIDRDG-TKSGY-DT-EMIRF---VRPLTTLPIIAS---------GGAGKME---HFLEAFLAGADAAL 227 (266)
T ss_dssp HHTTCSEEEEEETTTTT-TCSCC-CH-HHHHH---HGGGCCSCEEEE---------SCCCSHH---HHHHHHHHTCSEEE
T ss_pred HHcCCCEEEEEeecCCC-CcCCC-CH-HHHHH---HHHHcCCCEEEe---------CCCCCHH---HHHHHHHcCCHHHH
Confidence 333 67777632 121 22233 22 12222 234458898874 4555544 45555667999999
Q ss_pred ecCcccCCCCH
Q 012943 405 LSGETAHGKFP 415 (453)
Q Consensus 405 Ls~ETA~G~yP 415 (453)
+..---.+.++
T Consensus 228 vgsal~~~~~~ 238 (266)
T 2w6r_A 228 AASVFHFREID 238 (266)
T ss_dssp ESTTTC-----
T ss_pred ccHHHHcCCCC
Confidence 97554455544
No 187
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=58.75 E-value=61 Score=31.40 Aligned_cols=97 Identities=18% Similarity=0.140 Sum_probs=58.5
Q ss_pred HHHHhhhhcCCcEEEe------ccccCHHHHHH-HHHHHHhcCCCceEEEEec---ChhhhccHHHHHhh-cCEEEEeCC
Q 012943 271 EDIKFGVDNQVDFYAV------SFVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~l------SfV~sa~dv~~-v~~~L~~~~~~i~IIakIE---T~~gv~NldeI~~~-sDgImIgRG 339 (453)
+.+++.++.|+|+|.+ ++.-+.++-.+ ++..++..+.+++||+-+= |.++++......+. +|++|+-+-
T Consensus 36 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 115 (303)
T 2wkj_A 36 RLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTP 115 (303)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEecCC
Confidence 4457778999999876 23334444444 3444455567899999874 46677666655554 899998654
Q ss_pred CccccCCCCCHHHHHHHHHHHHHHcC-CCEEEE
Q 012943 340 DLGAELPIEDVPLLQEDIIRRCRSMQ-KPVIVA 371 (453)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aG-kpvi~a 371 (453)
.+.-- +-+.+...-+.| |.+.+ .|+++.
T Consensus 116 ~y~~~-s~~~l~~~f~~v---a~a~~~lPiilY 144 (303)
T 2wkj_A 116 FYYPF-SFEEHCDHYRAI---IDSADGLPMVVY 144 (303)
T ss_dssp CSSCC-CHHHHHHHHHHH---HHHHTTCCEEEE
T ss_pred CCCCC-CHHHHHHHHHHH---HHhCCCCCEEEE
Confidence 43211 112333333444 44556 898875
No 188
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=58.73 E-value=85 Score=30.21 Aligned_cols=97 Identities=11% Similarity=0.095 Sum_probs=57.6
Q ss_pred HHHHhhhhcCCcEEEec------cccCHHHHHH-HHHHHHhcCCCceEEEEec---ChhhhccHHHHHhh-cCEEEEeCC
Q 012943 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lS------fV~sa~dv~~-v~~~L~~~~~~i~IIakIE---T~~gv~NldeI~~~-sDgImIgRG 339 (453)
+.+++.++.|+|+|.+. +.-+.++-.+ ++...+..+.+++||+-+= |.++++......+. +|++|+-+-
T Consensus 32 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 111 (297)
T 3flu_A 32 DLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVP 111 (297)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 44577789999998762 1223333333 3444455567899999773 55666666655544 799998754
Q ss_pred CccccCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 012943 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (453)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~a 371 (453)
...- . .-..+.+..-..|.+.+.|+++.
T Consensus 112 ~y~~---~-~~~~l~~~f~~va~a~~lPiilY 139 (297)
T 3flu_A 112 YYNK---P-SQEGIYQHFKTIAEATSIPMIIY 139 (297)
T ss_dssp CSSC---C-CHHHHHHHHHHHHHHCCSCEEEE
T ss_pred CCCC---C-CHHHHHHHHHHHHHhCCCCEEEE
Confidence 3321 1 11223333444455668998886
No 189
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=58.28 E-value=57 Score=30.37 Aligned_cols=144 Identities=10% Similarity=-0.003 Sum_probs=80.0
Q ss_pred HHHHhhhhcCCcEEEecccc----------CHHHHHHHHHHHHhcCCCceEEEE-------ecCh------hhhccHHHH
Q 012943 271 EDIKFGVDNQVDFYAVSFVK----------DAKVVHELKDYLKSCNADIHVIVK-------IESA------DSIPNLHSI 327 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lSfV~----------sa~dv~~v~~~L~~~~~~i~IIak-------IET~------~gv~NldeI 327 (453)
+.++.+.+.|.|+|-+.... +.+++.++++.+++.|-.+..+.- +-++ ++++.+...
T Consensus 34 ~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~ 113 (295)
T 3cqj_A 34 ERLQLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVETGVRVPSMCLSAHRRFPLGSEDDAVRAQGLEIMRKA 113 (295)
T ss_dssp HHHHHHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHHCCEEEEEEEGGGGTSCTTCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHHcCCeEEEEecCcccCCCCCCCCHHHHHHHHHHHHHH
Confidence 45677778999999887543 467788899999887655433321 1111 233444444
Q ss_pred Hhh-----cCEEEEeCCCccccCCC----CCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHh
Q 012943 328 ISA-----SDGAMVARGDLGAELPI----EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVRE 398 (453)
Q Consensus 328 ~~~-----sDgImIgRGDLg~elg~----e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~ 398 (453)
+.. ++.+.+..++-...... +.+....+++...|.+.|..+.+ |.+-.....|..++.++...+
T Consensus 114 i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~l-----En~~~~~~~~~~~~~~l~~~v-- 186 (295)
T 3cqj_A 114 IQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLAM-----EIMDYPLMNSISKALGYAHYL-- 186 (295)
T ss_dssp HHHHHHHTCCEEEECCCSCSSSCCCHHHHHHHHHHHHHHHHHHHHHTCEEEE-----ECCSSGGGCSHHHHHHHHHHH--
T ss_pred HHHHHHcCCCEEEECCCCCCcCcCHHHHHHHHHHHHHHHHHHHHHhCCEEEE-----eeCCCcccCCHHHHHHHHHhc--
Confidence 443 46676654432111111 23444557778888888987665 333322344555666665555
Q ss_pred CccEEEecCccc----CCCCHHHHHHH
Q 012943 399 GADAVMLSGETA----HGKFPLKAVKV 421 (453)
Q Consensus 399 G~D~vmLs~ETA----~G~yP~eaV~~ 421 (453)
+.+.+-+.-+|. .|.-|.+.++.
T Consensus 187 ~~~~vg~~~D~~h~~~~g~d~~~~l~~ 213 (295)
T 3cqj_A 187 NNPWFQLYPDIGNLSAWDNDVQMELQA 213 (295)
T ss_dssp CCTTEEEECBHHHHHSSSCCHHHHHHH
T ss_pred CCCCeEEEeccchHhhcCCCHHHHHHH
Confidence 334444444542 46667665553
No 190
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=58.15 E-value=99 Score=27.31 Aligned_cols=102 Identities=14% Similarity=0.177 Sum_probs=55.4
Q ss_pred HHHHHhhhhcCCcEEEeccc-cCHHHHHH----HHHHHHhcCCCceEEEEecChhhhccHHHHHhh-cCEEEEeCCCccc
Q 012943 270 WEDIKFGVDNQVDFYAVSFV-KDAKVVHE----LKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGA 343 (453)
Q Consensus 270 ~~DI~~a~~~gvd~I~lSfV-~sa~dv~~----v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~-sDgImIgRGDLg~ 343 (453)
.++++.+.+.|+|+|.+-+- .+..++.+ +++.... ..+.++.. +.++...+. +|++.++-+|+.
T Consensus 29 ~~~~~~~~~~G~~~i~l~~~~~~~~~~~~~~~~l~~~~~~--~~v~v~v~-------~~~~~a~~~gad~v~l~~~~~~- 98 (215)
T 1xi3_A 29 VESVREALEGGATAIQMRIKNAPTREMYEIGKTLRQLTRE--YDALFFVD-------DRVDVALAVDADGVQLGPEDMP- 98 (215)
T ss_dssp HHHHHHHHHTTCSEEEECCCSCCHHHHHHHHHHHHHHHHH--TTCEEEEE-------SCHHHHHHHTCSEEEECTTSCC-
T ss_pred HHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHH--cCCeEEEc-------ChHHHHHHcCCCEEEECCccCC-
Confidence 36677788999999977432 23333332 3333332 24555542 344444444 899998766653
Q ss_pred cCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecC
Q 012943 344 ELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (453)
Q Consensus 344 elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 407 (453)
+..+++ .. .++.+.+.+ .|..| +..+...|+|.+++++
T Consensus 99 ------~~~~~~-----~~-~~~~~~v~~-----------~t~~e---~~~~~~~g~d~i~~~~ 136 (215)
T 1xi3_A 99 ------IEVAKE-----IA-PNLIIGASV-----------YSLEE---ALEAEKKGADYLGAGS 136 (215)
T ss_dssp ------HHHHHH-----HC-TTSEEEEEE-----------SSHHH---HHHHHHHTCSEEEEEC
T ss_pred ------HHHHHH-----hC-CCCEEEEec-----------CCHHH---HHHHHhcCCCEEEEcC
Confidence 222211 11 344444431 23334 3356678999999864
No 191
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=58.14 E-value=80 Score=31.56 Aligned_cols=117 Identities=12% Similarity=0.011 Sum_probs=61.8
Q ss_pred hcCCcEEEeccc-----------cCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHh------hcCEEEEe---
Q 012943 278 DNQVDFYAVSFV-----------KDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIIS------ASDGAMVA--- 337 (453)
Q Consensus 278 ~~gvd~I~lSfV-----------~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~------~sDgImIg--- 337 (453)
+.|+|+|-+.+- .+++.+.++-+.+.+. .+++|++||=----..++.+++. -+|+|.+-
T Consensus 153 ~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~-~~~PV~vKi~p~~d~~~~~~~a~~~~~~Gg~d~I~~~NT~ 231 (354)
T 4ef8_A 153 TEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEV-YPHSFGVKMPPYFDFAHFDAAAEILNEFPKVQFITCINSI 231 (354)
T ss_dssp HHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHH-CCSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEECCCE
T ss_pred hcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHh-hCCCeEEEecCCCCHHHHHHHHHHHHhCCCccEEEEeccc
Confidence 357888876542 3445444444444432 35789999954322334444443 15777641
Q ss_pred -CC---Cc---------cccCC-C--CCHHHHHHHHHHHHHHc--CCCEEEEechhhhhccCCCCchHHHHHHHHHHHhC
Q 012943 338 -RG---DL---------GAELP-I--EDVPLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREG 399 (453)
Q Consensus 338 -RG---DL---------g~elg-~--e~v~~aqk~Ii~~c~~a--Gkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G 399 (453)
+| |+ ....| + +.+..+--+++...+++ ..|+|.. .+.-+ ..|+..++..|
T Consensus 232 ~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~~~~ipII~~---------GGI~s---~~da~~~l~aG 299 (354)
T 4ef8_A 232 GNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPGKLIFGC---------GGVYT---GEDAFLHVLAG 299 (354)
T ss_dssp EEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTTSEEEEE---------SCCCS---HHHHHHHHHHT
T ss_pred CcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHhCCCCCEEEE---------CCcCC---HHHHHHHHHcC
Confidence 10 10 00111 1 22333333444444444 3676653 44444 45788888999
Q ss_pred ccEEEecC
Q 012943 400 ADAVMLSG 407 (453)
Q Consensus 400 ~D~vmLs~ 407 (453)
+|+||+..
T Consensus 300 Ad~V~vgr 307 (354)
T 4ef8_A 300 ASMVQVGT 307 (354)
T ss_dssp EEEEEECH
T ss_pred CCEEEEhH
Confidence 99999963
No 192
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=58.07 E-value=38 Score=32.59 Aligned_cols=97 Identities=10% Similarity=0.152 Sum_probs=56.7
Q ss_pred HHHHhhhhcCCcEEEecc------ccCHHHHHH-HHHHHHhcCCCceEEEEec---ChhhhccHHHHHhh-cCEEEEeCC
Q 012943 271 EDIKFGVDNQVDFYAVSF------VKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lSf------V~sa~dv~~-v~~~L~~~~~~i~IIakIE---T~~gv~NldeI~~~-sDgImIgRG 339 (453)
+.+++.++.|+|+|.+.= .-+.++-.+ ++...+..+.+++||+-+= |.++++......+. +|++|+-+-
T Consensus 26 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 105 (291)
T 3tak_A 26 KLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGADAALLVTP 105 (291)
T ss_dssp HHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 455777899999986521 113333333 3344455567899999773 55666665555444 899998754
Q ss_pred CccccCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 012943 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (453)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~a 371 (453)
.+.- ..-+.+. ...-..|.+.+.|+++.
T Consensus 106 ~y~~-~~~~~l~---~~f~~ia~a~~lPiilY 133 (291)
T 3tak_A 106 YYNK-PTQEGLY---QHYKAIAEAVELPLILY 133 (291)
T ss_dssp CSSC-CCHHHHH---HHHHHHHHHCCSCEEEE
T ss_pred CCCC-CCHHHHH---HHHHHHHHhcCCCEEEE
Confidence 4321 1112333 33333455568998876
No 193
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=57.99 E-value=1.2e+02 Score=28.97 Aligned_cols=97 Identities=21% Similarity=0.190 Sum_probs=57.7
Q ss_pred HHHHhhhhcCCcEEEe------ccccCHHHHHH-HHHHHHhcCCCceEEEEec---ChhhhccHHHHHhh-cCEEEEeCC
Q 012943 271 EDIKFGVDNQVDFYAV------SFVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~l------SfV~sa~dv~~-v~~~L~~~~~~i~IIakIE---T~~gv~NldeI~~~-sDgImIgRG 339 (453)
+.+++.++.|+|+|.+ ++.-+.++-.+ ++...+..+.+++||+-+= |.++++......+. +|++|+-+-
T Consensus 25 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 104 (294)
T 2ehh_A 25 NLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVVP 104 (294)
T ss_dssp HHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 4557778999999876 22334444433 3444455567899999873 46666666655544 799998654
Q ss_pred CccccCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 012943 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (453)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~a 371 (453)
.+.- ..-..+.+..-..|.+.+.|+++.
T Consensus 105 ~y~~----~s~~~l~~~f~~va~a~~lPiilY 132 (294)
T 2ehh_A 105 YYNK----PTQRGLYEHFKTVAQEVDIPIIIY 132 (294)
T ss_dssp CSSC----CCHHHHHHHHHHHHHHCCSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHhcCCCEEEE
Confidence 4321 111222333333455668888875
No 194
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=57.98 E-value=57 Score=31.66 Aligned_cols=98 Identities=10% Similarity=0.032 Sum_probs=57.1
Q ss_pred HHHHhhhhcCCcEEEec------cccCHHHHHH-HHHHHHhcCCCceEEEEe---cChhhhccHHHHHhh-cCEEEEeCC
Q 012943 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKI---ESADSIPNLHSIISA-SDGAMVARG 339 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lS------fV~sa~dv~~-v~~~L~~~~~~i~IIakI---ET~~gv~NldeI~~~-sDgImIgRG 339 (453)
+.+++.++.|+|+|.+. +.-+.++-.+ ++...+..+.+++||+-+ -|.++++......+. +|++|+-+-
T Consensus 39 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 118 (307)
T 3s5o_A 39 ENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVTP 118 (307)
T ss_dssp HHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 44567789999998752 2233444444 344445567789999977 455666655555444 899998543
Q ss_pred Ccc-ccCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 012943 340 DLG-AELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (453)
Q Consensus 340 DLg-~elg~e~v~~aqk~Ii~~c~~aGkpvi~a 371 (453)
..- ....-+.+...-+.| |.+.+.|+++.
T Consensus 119 ~y~~~~~s~~~l~~~f~~i---a~a~~lPiilY 148 (307)
T 3s5o_A 119 CYYRGRMSSAALIHHYTKV---ADLSPIPVVLY 148 (307)
T ss_dssp CTTGGGCCHHHHHHHHHHH---HHHCSSCEEEE
T ss_pred CcCCCCCCHHHHHHHHHHH---HhhcCCCEEEE
Confidence 321 111212333333333 55668888876
No 195
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=57.93 E-value=48 Score=29.23 Aligned_cols=59 Identities=22% Similarity=0.281 Sum_probs=42.5
Q ss_pred eecCCCEEEEEeec--CC---CCccEEEeccccccc--ccccCCEEEEe--CCe-eEEEEEEEeCCeEE
Q 012943 180 ILKEGQEFNFTIKR--GV---STEDTVSVNYDDFVN--DVEVGDILLVD--GGM-MSLAVKSKTKDLVK 238 (453)
Q Consensus 180 ~L~~G~~v~lt~~~--~~---~~~~~I~v~~~~l~~--~vk~Gd~IlID--DG~-I~L~V~ev~~~~v~ 238 (453)
-++.|++..++... .+ +......++-..|.. .+++|+.+.+. +|. +..+|.+++++.+.
T Consensus 46 Gm~~Ge~~~v~ipp~~aYG~~~~~lv~~v~~~~f~~~~~~~~G~~~~~~~~~G~~~~~~V~~v~~~~v~ 114 (158)
T 3cgm_A 46 GREEGEAFQAHVPAEKAYGPHDPEGVQVVPLSAFPEDAEVVPGAQFYAQDMEGNPMPLTVVAVEGEEVT 114 (158)
T ss_dssp TCBTTCEEEEEECGGGTTCCCCGGGEEEEEGGGSCTTSCCCTTCEEEEEETTTEEEEEEEEEEETTEEE
T ss_pred CCCCCCEEEEEECcHHHcCCCCcceEEEEEHHHCCCCCCCccCCEEEEECCCCCEEEEEEEEECCCEEE
Confidence 46899999988763 22 233456666666764 68999999997 565 46789999888765
No 196
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=57.90 E-value=29 Score=33.75 Aligned_cols=97 Identities=19% Similarity=0.142 Sum_probs=57.4
Q ss_pred HHHHhhhhcCCcEEEec------cccCHHHHHH-HHHHHHhcCCCceEEEEe---cChhhhccHHHHHhh-cCEEEEeCC
Q 012943 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKI---ESADSIPNLHSIISA-SDGAMVARG 339 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lS------fV~sa~dv~~-v~~~L~~~~~~i~IIakI---ET~~gv~NldeI~~~-sDgImIgRG 339 (453)
+.+++.++.|+|+|.+. +.-+.++-.+ ++..++..+.+++||+-+ -|.++++......+. +|++++-+-
T Consensus 40 ~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 119 (304)
T 3l21_A 40 RLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVTP 119 (304)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 44577789999998763 2223334333 344445567789999987 345666655555444 899998754
Q ss_pred CccccCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 012943 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (453)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~a 371 (453)
...- ..-..+.+..-..|.+.+.|+++.
T Consensus 120 ~y~~----~s~~~l~~~f~~va~a~~lPiilY 147 (304)
T 3l21_A 120 YYSK----PPQRGLQAHFTAVADATELPMLLY 147 (304)
T ss_dssp CSSC----CCHHHHHHHHHHHHTSCSSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHhcCCCEEEE
Confidence 3321 112223333444455668888876
No 197
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=57.83 E-value=68 Score=30.85 Aligned_cols=115 Identities=12% Similarity=0.152 Sum_probs=66.5
Q ss_pred HHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecCh-hhhccHHHHHhhcCEEEE--eCCCccccCCCC-
Q 012943 273 IKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESA-DSIPNLHSIISASDGAMV--ARGDLGAELPIE- 348 (453)
Q Consensus 273 I~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~-~gv~NldeI~~~sDgImI--gRGDLg~elg~e- 348 (453)
++.+.+.|+|++.+|=. ..++..++++++.+.|-+ .|..+ ++ ...+.+.+|++.+.|++- .+-+- .|..
T Consensus 118 ~~~~~~aGvdGvIipDl-p~ee~~~~~~~~~~~gl~--~I~lv-ap~t~~eri~~i~~~~~gfiY~vs~~Gv---TG~~~ 190 (271)
T 3nav_A 118 YQRCQKAGVDSVLIADV-PTNESQPFVAAAEKFGIQ--PIFIA-PPTASDETLRAVAQLGKGYTYLLSRAGV---TGAET 190 (271)
T ss_dssp HHHHHHHTCCEEEETTS-CGGGCHHHHHHHHHTTCE--EEEEE-CTTCCHHHHHHHHHHCCSCEEECCCC----------
T ss_pred HHHHHHCCCCEEEECCC-CHHHHHHHHHHHHHcCCe--EEEEE-CCCCCHHHHHHHHHHCCCeEEEEeccCC---CCccc
Confidence 44556789999888743 235566777878776644 23333 33 235788889888754432 22111 1211
Q ss_pred CHHHHHHHHHHHHHHc-CCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEec
Q 012943 349 DVPLLQEDIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (453)
Q Consensus 349 ~v~~aqk~Ii~~c~~a-Gkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (453)
.++.-....++..+++ ..|+++. .+.-|. .++..++..|+|+++..
T Consensus 191 ~~~~~~~~~v~~vr~~~~~Pv~vG---------fGIst~---e~~~~~~~~gADgvIVG 237 (271)
T 3nav_A 191 KANMPVHALLERLQQFDAPPALLG---------FGISEP---AQVKQAIEAGAAGAISG 237 (271)
T ss_dssp -CCHHHHHHHHHHHHTTCCCEEEC---------SSCCSH---HHHHHHHHTTCSEEEES
T ss_pred CCchhHHHHHHHHHHhcCCCEEEE---------CCCCCH---HHHHHHHHcCCCEEEEC
Confidence 1223345556666665 6788873 444443 34556888999999985
No 198
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=57.53 E-value=66 Score=31.43 Aligned_cols=97 Identities=15% Similarity=0.079 Sum_probs=57.4
Q ss_pred HHHHhhhhcCCcEEEec------cccCHHHHHH-HHHHHHhcCCCceEEEEec---ChhhhccHHHHHhh-cCEEEEeCC
Q 012943 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lS------fV~sa~dv~~-v~~~L~~~~~~i~IIakIE---T~~gv~NldeI~~~-sDgImIgRG 339 (453)
+.+++.++.|+|+|.+. +.-+.++-.+ ++..++..+.+++||+-+= |.++++......+. +|++|+-+-
T Consensus 49 ~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 128 (315)
T 3na8_A 49 RSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVLPI 128 (315)
T ss_dssp HHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 44467789999998752 2223333333 3444455567899999874 55666666655555 899999754
Q ss_pred CccccCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 012943 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (453)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~a 371 (453)
...- ..-..+.+..-..|.+.+.|+++.
T Consensus 129 ~y~~----~s~~~l~~~f~~va~a~~lPiilY 156 (315)
T 3na8_A 129 SYWK----LNEAEVFQHYRAVGEAIGVPVMLY 156 (315)
T ss_dssp CSSC----CCHHHHHHHHHHHHHHCSSCEEEE
T ss_pred CCCC----CCHHHHHHHHHHHHHhCCCcEEEE
Confidence 4321 111223333334455668888876
No 199
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=57.21 E-value=1.3e+02 Score=28.81 Aligned_cols=97 Identities=13% Similarity=0.139 Sum_probs=57.3
Q ss_pred HHHHhhhhcCCcEEEec------cccCHHHHHH-HHHHHHhcCCCceEEEEec---ChhhhccHHHHHhh-cCEEEEeCC
Q 012943 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lS------fV~sa~dv~~-v~~~L~~~~~~i~IIakIE---T~~gv~NldeI~~~-sDgImIgRG 339 (453)
+.+++.++.|+|+|.+. +.-+.++-.+ ++...+..+.+++||+-+= |.++++......+. +|++|+-+-
T Consensus 25 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 104 (289)
T 2yxg_A 25 ENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSITP 104 (289)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 44577789999998762 2233433333 3444455567899999874 46666666655444 899998654
Q ss_pred CccccCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 012943 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (453)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~a 371 (453)
.+.- .+-+.+...-+ ..|.+.+.|+++.
T Consensus 105 ~y~~-~s~~~l~~~f~---~ia~a~~lPiilY 132 (289)
T 2yxg_A 105 YYNK-PTQEGLRKHFG---KVAESINLPIVLY 132 (289)
T ss_dssp CSSC-CCHHHHHHHHH---HHHHHCSSCEEEE
T ss_pred CCCC-CCHHHHHHHHH---HHHHhcCCCEEEE
Confidence 4321 11122333333 3355668888875
No 200
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=56.71 E-value=16 Score=38.15 Aligned_cols=51 Identities=18% Similarity=0.372 Sum_probs=41.9
Q ss_pred CcEEEEecCCCCCCHHHHHHHHHhCCcEEEeecCCCChHHHHHHHHHHHHH
Q 012943 100 KTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEY 150 (453)
Q Consensus 100 ~TKIi~TiGPss~s~e~i~~Li~aGmnvaRiNfSHg~~e~~~~~I~~iR~a 150 (453)
+..+-+.+|...+..+.++.|+++|+++.=||.+||......+.++.+|+.
T Consensus 217 rl~v~aavG~~~~~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~ 267 (490)
T 4avf_A 217 RLRVGAAVGTGADTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQT 267 (490)
T ss_dssp CBCCEEEECSSTTHHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHH
T ss_pred cceeeeeeccccchHHHHHHHhhcccceEEecccCCcchhHHHHHHHHHHH
Confidence 455666778877889999999999999999999999887777777766653
No 201
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=56.14 E-value=57 Score=34.27 Aligned_cols=119 Identities=15% Similarity=0.162 Sum_probs=62.4
Q ss_pred HHHHHHHHHHHHhcCCCceEEEE-ecChhhhccHHHHHhh-cCEEEEeC-CCccccCCCCCHHHHHHHHHHHHHH----c
Q 012943 292 AKVVHELKDYLKSCNADIHVIVK-IESADSIPNLHSIISA-SDGAMVAR-GDLGAELPIEDVPLLQEDIIRRCRS----M 364 (453)
Q Consensus 292 a~dv~~v~~~L~~~~~~i~IIak-IET~~gv~NldeI~~~-sDgImIgR-GDLg~elg~e~v~~aqk~Ii~~c~~----a 364 (453)
.+++..+++.. +++|++| +-+ .+......++ +|+|.++- |--..+.+... ..+..++.+++.+ .
T Consensus 332 ~~~i~~lr~~~-----~~PvivKgv~~---~e~A~~a~~aGad~I~vs~hgG~~~d~~~~~-~~~l~~v~~~v~~~~~~~ 402 (511)
T 1kbi_A 332 WKDIEELKKKT-----KLPIVIKGVQR---TEDVIKAAEIGVSGVVLSNHGGRQLDFSRAP-IEVLAETMPILEQRNLKD 402 (511)
T ss_dssp HHHHHHHHHHC-----SSCEEEEEECS---HHHHHHHHHTTCSEEEECCTTTTSSTTCCCH-HHHHHHHHHHHHTTTCBT
T ss_pred HHHHHHHHHHh-----CCcEEEEeCCC---HHHHHHHHHcCCCEEEEcCCCCccCCCCCch-HHHHHHHHHHHHhhccCC
Confidence 45566665543 5778888 333 2222222223 79999941 11111222222 3344555555543 2
Q ss_pred CCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccCCC--CHHHHH-HHHHHHHHHHhc
Q 012943 365 QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGK--FPLKAV-KVMHTVALRTES 431 (453)
Q Consensus 365 Gkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~--yP~eaV-~~m~~I~~~aE~ 431 (453)
..|||.. .+.-+ -.|+..++..|+|+||+..--..|. +-.+.| +.+..+..+.+.
T Consensus 403 ~ipVia~---------GGI~~---g~Dv~kaLalGAdaV~iGr~~l~~~~~~G~~gv~~~l~~l~~el~~ 460 (511)
T 1kbi_A 403 KLEVFVD---------GGVRR---GTDVLKALCLGAKGVGLGRPFLYANSCYGRNGVEKAIEILRDEIEM 460 (511)
T ss_dssp TBEEEEE---------SSCCS---HHHHHHHHHHTCSEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEE---------CCCCC---HHHHHHHHHcCCCEEEECHHHHHHHHhcChHHHHHHHHHHHHHHHH
Confidence 5677764 33333 5688999999999999864222111 111223 455566655554
No 202
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=56.08 E-value=1.4e+02 Score=28.24 Aligned_cols=93 Identities=24% Similarity=0.257 Sum_probs=56.6
Q ss_pred cHHHHHhh-cCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCcc
Q 012943 323 NLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGAD 401 (453)
Q Consensus 323 NldeI~~~-sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D 401 (453)
.+..+.+. +|.|+.-.++.+..-++.. +...+++. ....+|+++. .+.-+. .|+..++..|+|
T Consensus 139 ~a~~~~~~gad~v~~~~~~~Gt~~~~~~-~~~l~~i~---~~~~iPviv~---------gGI~t~---eda~~~~~~GAd 202 (264)
T 1xm3_A 139 LARKLEELGVHAIMPGASPIGSGQGILN-PLNLSFII---EQAKVPVIVD---------AGIGSP---KDAAYAMELGAD 202 (264)
T ss_dssp HHHHHHHHTCSCBEECSSSTTCCCCCSC-HHHHHHHH---HHCSSCBEEE---------SCCCSH---HHHHHHHHTTCS
T ss_pred HHHHHHHhCCCEEEECCcccCCCCCCCC-HHHHHHHH---hcCCCCEEEE---------eCCCCH---HHHHHHHHcCCC
Confidence 34444444 6777443445454434333 23333332 2457898874 344443 356678889999
Q ss_pred EEEecCcccCCCCHHHHHHHHHHHHHHHhc
Q 012943 402 AVMLSGETAHGKFPLKAVKVMHTVALRTES 431 (453)
Q Consensus 402 ~vmLs~ETA~G~yP~eaV~~m~~I~~~aE~ 431 (453)
+|+..+--....-|.++++.+.+.+++...
T Consensus 203 gViVGSAi~~a~dp~~~~~~l~~~v~~~~~ 232 (264)
T 1xm3_A 203 GVLLNTAVSGADDPVKMARAMKLAVEAGRL 232 (264)
T ss_dssp EEEESHHHHTSSSHHHHHHHHHHHHHHHHH
T ss_pred EEEEcHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 999976544556799999998888766553
No 203
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=55.67 E-value=15 Score=38.36 Aligned_cols=50 Identities=16% Similarity=0.252 Sum_probs=40.6
Q ss_pred cEEEEecCCCCCCHHHHHHHHHhCCcEEEeecCCCChHHHHHHHHHHHHH
Q 012943 101 TKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEY 150 (453)
Q Consensus 101 TKIi~TiGPss~s~e~i~~Li~aGmnvaRiNfSHg~~e~~~~~I~~iR~a 150 (453)
..+.+.+|......+.++.++++|+++.=||++||....+.+.++.+|+.
T Consensus 244 l~vga~vG~~~~~~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~ 293 (514)
T 1jcn_A 244 LLCGAAVGTREDDKYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQK 293 (514)
T ss_dssp BCCEEEECSSTTHHHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHH
T ss_pred eeeeeEecCchhhHHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHh
Confidence 44566678766778899999999999999999999987766777777754
No 204
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=55.65 E-value=77 Score=29.93 Aligned_cols=118 Identities=18% Similarity=0.109 Sum_probs=65.8
Q ss_pred HHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhhcCEEE-E-eCCCc-cccCCC
Q 012943 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAM-V-ARGDL-GAELPI 347 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~sDgIm-I-gRGDL-g~elg~ 347 (453)
+.++.+.+.|+|+|.++-.. .+++..+.+++.+.+-. .+.-+.-....+.+.+|++.++|++ + ..... |..-+.
T Consensus 113 ~~~~~~~~aGadgii~~d~~-~e~~~~~~~~~~~~g~~--~i~l~~p~t~~~~i~~i~~~~~g~v~~~s~~G~tG~~~~~ 189 (268)
T 1qop_A 113 AFYARCEQVGVDSVLVADVP-VEESAPFRQAALRHNIA--PIFICPPNADDDLLRQVASYGRGYTYLLSRSGVTGAENRG 189 (268)
T ss_dssp HHHHHHHHHTCCEEEETTCC-GGGCHHHHHHHHHTTCE--EECEECTTCCHHHHHHHHHHCCSCEEEESSSSCCCSSSCC
T ss_pred HHHHHHHHcCCCEEEEcCCC-HHHHHHHHHHHHHcCCc--EEEEECCCCCHHHHHHHHhhCCCcEEEEecCCcCCCccCC
Confidence 44555667899998887543 46677777888776543 3333333244567888888876432 2 22111 111111
Q ss_pred -CCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEec
Q 012943 348 -EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (453)
Q Consensus 348 -e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (453)
+.+....+++- +..+.|+++. .+.-|. .++..++..|+|+++..
T Consensus 190 ~~~~~~~i~~lr---~~~~~pi~vg---------gGI~t~---e~~~~~~~agAD~vVVG 234 (268)
T 1qop_A 190 ALPLHHLIEKLK---EYHAAPALQG---------FGISSP---EQVSAAVRAGAAGAISG 234 (268)
T ss_dssp --CCHHHHHHHH---HTTCCCEEEE---------SSCCSH---HHHHHHHHTTCSEEEEC
T ss_pred CchHHHHHHHHH---hccCCcEEEE---------CCCCCH---HHHHHHHHcCCCEEEEC
Confidence 12222223322 2237888774 334333 34557788999999975
No 205
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=55.57 E-value=1.1e+02 Score=29.60 Aligned_cols=82 Identities=20% Similarity=0.202 Sum_probs=54.2
Q ss_pred cCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcC-CCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcc
Q 012943 331 SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQ-KPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGET 409 (453)
Q Consensus 331 sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aG-kpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ET 409 (453)
+|.||--....|...|+.. +...+.+++. ... .|||++ .+.-| -+|++.+...|+|+|++..--
T Consensus 146 ~~aVmPlg~pIGsG~Gi~~-~~~L~~i~~~--~~~~vPVI~~---------GGI~t---psDAa~AmeLGAdgVlVgSAI 210 (268)
T 2htm_A 146 TATVMPLAAPIGSGWGVRT-RALLELFARE--KASLPPVVVD---------AGLGL---PSHAAEVMELGLDAVLVNTAI 210 (268)
T ss_dssp CSCBEEBSSSTTTCCCSTT-HHHHHHHHHT--TTTSSCBEEE---------SCCCS---HHHHHHHHHTTCCEEEESHHH
T ss_pred CCEEEecCccCcCCcccCC-HHHHHHHHHh--cCCCCeEEEe---------CCCCC---HHHHHHHHHcCCCEEEEChHH
Confidence 5666553344444445544 3333333221 234 899985 44555 457889999999999999888
Q ss_pred cCCCCHHHHHHHHHHHHH
Q 012943 410 AHGKFPLKAVKVMHTVAL 427 (453)
Q Consensus 410 A~G~yP~eaV~~m~~I~~ 427 (453)
+.++.|.+-.+.|..-+.
T Consensus 211 ~~a~dP~~ma~af~~Av~ 228 (268)
T 2htm_A 211 AEAQDPPAMAEAFRLAVE 228 (268)
T ss_dssp HTSSSHHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHH
Confidence 899999888887777543
No 206
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=54.81 E-value=59 Score=31.47 Aligned_cols=91 Identities=15% Similarity=0.142 Sum_probs=49.2
Q ss_pred cCEEEEeC-CCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHH-HHHHHHHHHhCccEEEecCc
Q 012943 331 SDGAMVAR-GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGADAVMLSGE 408 (453)
Q Consensus 331 sDgImIgR-GDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~D~vmLs~E 408 (453)
+||+++.- .-=+..+..++-..+.+.+++.++.+..||+.- .+..+-.| +.-.-.+-..|+|++|+..=
T Consensus 42 v~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaG---------vg~~~t~~ai~la~~a~~~Gadavlv~~P 112 (301)
T 3m5v_A 42 IDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAG---------AGSNATHEAVGLAKFAKEHGADGILSVAP 112 (301)
T ss_dssp CCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEE---------CCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEe---------CCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 78988741 111112222222223333333332224677764 33444445 55556677789999998632
Q ss_pred ccCCCCHHHHHHHHHHHHHHHh
Q 012943 409 TAHGKFPLKAVKVMHTVALRTE 430 (453)
Q Consensus 409 TA~G~yP~eaV~~m~~I~~~aE 430 (453)
--...-+-+.++..+.|+..+.
T Consensus 113 ~y~~~s~~~l~~~f~~va~a~~ 134 (301)
T 3m5v_A 113 YYNKPTQQGLYEHYKAIAQSVD 134 (301)
T ss_dssp CSSCCCHHHHHHHHHHHHHHCS
T ss_pred CCCCCCHHHHHHHHHHHHHhCC
Confidence 2223335678888999988774
No 207
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=54.69 E-value=87 Score=30.11 Aligned_cols=106 Identities=14% Similarity=0.223 Sum_probs=58.7
Q ss_pred ecCCCccCCCCCCHhhHHHHHhhhhcCCcEE--Eecc---------ccCHH-----------HHHHHHHHHHhcCCCceE
Q 012943 254 NVRGKSANLPSITDKDWEDIKFGVDNQVDFY--AVSF---------VKDAK-----------VVHELKDYLKSCNADIHV 311 (453)
Q Consensus 254 nlp~~~~~lp~ltekD~~DI~~a~~~gvd~I--~lSf---------V~sa~-----------dv~~v~~~L~~~~~~i~I 311 (453)
-+|-.....|.+. .-.+.++...+.|+|+| ++|| ++.+. ++.++-+.+++.+.++++
T Consensus 22 li~yi~aGdP~~~-~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pi 100 (271)
T 3nav_A 22 FVPFVTIGDPNPE-QSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPI 100 (271)
T ss_dssp EEEEEETTSSCHH-HHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCE
T ss_pred EEEEEeCCCCCHH-HHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCE
Confidence 3443334445432 23455666677899985 6677 33211 111122223333356777
Q ss_pred EEEe-cCh---hhhccHHHHHhh--cCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEE
Q 012943 312 IVKI-ESA---DSIPNLHSIISA--SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIV 370 (453)
Q Consensus 312 IakI-ET~---~gv~NldeI~~~--sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~ 370 (453)
+.+. .++ -|++++-+-++. +||+++. || |+++ .......|+++|...+.
T Consensus 101 vlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIip--Dl----p~ee----~~~~~~~~~~~gl~~I~ 155 (271)
T 3nav_A 101 GLLMYANLVYARGIDDFYQRCQKAGVDSVLIA--DV----PTNE----SQPFVAAAEKFGIQPIF 155 (271)
T ss_dssp EEEECHHHHHHTCHHHHHHHHHHHTCCEEEET--TS----CGGG----CHHHHHHHHHTTCEEEE
T ss_pred EEEecCcHHHHHhHHHHHHHHHHCCCCEEEEC--CC----CHHH----HHHHHHHHHHcCCeEEE
Confidence 7662 222 356655554443 7999993 44 4444 46688889999987553
No 208
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=54.65 E-value=53 Score=29.42 Aligned_cols=60 Identities=20% Similarity=0.375 Sum_probs=43.8
Q ss_pred eecCCCEEEEEeec--CCC---CccEEEeccccccc--ccccCCEEEEe--CCe-eEEEEEEEeCCeEEE
Q 012943 180 ILKEGQEFNFTIKR--GVS---TEDTVSVNYDDFVN--DVEVGDILLVD--GGM-MSLAVKSKTKDLVKC 239 (453)
Q Consensus 180 ~L~~G~~v~lt~~~--~~~---~~~~I~v~~~~l~~--~vk~Gd~IlID--DG~-I~L~V~ev~~~~v~~ 239 (453)
-.+.|++.+|+... .+| ......++-..|.. .+++|..+.+. ||. +..+|++++++.|+.
T Consensus 74 gm~~Ge~~~v~Ipp~~AYG~~~~~lv~~vp~~~f~~~~~~~~G~~~~~~~~~G~~~~~~V~~v~~~~V~v 143 (169)
T 4dt4_A 74 GLKVGDKTTFSLEPDAAFGVPSPDLIQYFSRREFMDAGEPEIGAIMLFTAMDGSEMPGVIREINGDSITV 143 (169)
T ss_dssp TCCTTCEEEEEECGGGTTCCCCGGGEEEEEGGGGTTTCCCCTTCEEEEECTTSCEEEEEEEEEETTEEEE
T ss_pred CCCCCCEEEEEEChHHhcCCCChHHEEEeCHHHCCCcCCCCCCcEEEEECCCCCEEEEEEEEEcCCEEEE
Confidence 46899999998763 333 33456677677764 58999999996 464 778999999987654
No 209
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=54.56 E-value=1.5e+02 Score=28.44 Aligned_cols=97 Identities=13% Similarity=0.116 Sum_probs=58.2
Q ss_pred HHHHhhhh-cCCcEEEe------ccccCHHHHHH-HHHHHHhcCCCceEEEEec---ChhhhccHHHHHhh-cCEEEEeC
Q 012943 271 EDIKFGVD-NQVDFYAV------SFVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVAR 338 (453)
Q Consensus 271 ~DI~~a~~-~gvd~I~l------SfV~sa~dv~~-v~~~L~~~~~~i~IIakIE---T~~gv~NldeI~~~-sDgImIgR 338 (453)
+.+++.++ .|+|+|.+ ++.-+.++-.+ ++...+..+.+++||+-+= |.++++......+. +|++|+-+
T Consensus 28 ~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 107 (293)
T 1f6k_A 28 QIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAVT 107 (293)
T ss_dssp HHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 45577888 99999876 23334444433 3444455667899999873 46677666655544 89999865
Q ss_pred CCccccCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 012943 339 GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (453)
Q Consensus 339 GDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~a 371 (453)
-.+.- ..-+.+...-+.| |.+.+.|+++.
T Consensus 108 P~y~~-~~~~~l~~~f~~v---a~a~~lPiilY 136 (293)
T 1f6k_A 108 PFYYK-FSFPEIKHYYDTI---IAETGSNMIVY 136 (293)
T ss_dssp CCSSC-CCHHHHHHHHHHH---HHHHCCCEEEE
T ss_pred CCCCC-CCHHHHHHHHHHH---HHhCCCCEEEE
Confidence 43311 0112233333333 55567898875
No 210
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=54.49 E-value=1.4e+02 Score=28.70 Aligned_cols=97 Identities=18% Similarity=0.156 Sum_probs=58.1
Q ss_pred HHHHhhhhcCCcEEEec------cccCHHHHHH-HHHHHHhcCCCceEEEEec---ChhhhccHHHHHhh-cCEEEEeCC
Q 012943 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lS------fV~sa~dv~~-v~~~L~~~~~~i~IIakIE---T~~gv~NldeI~~~-sDgImIgRG 339 (453)
+.+++.++.|+|+|.+. +.-+.++-.+ ++...+..+.+++||+-+= |.++++......+. +|++|+-+-
T Consensus 41 ~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~Gadavlv~~P 120 (304)
T 3cpr_A 41 EVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAGADGLLVVTP 120 (304)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 44577789999998762 2334444333 4444555567899999874 46677666655544 899998654
Q ss_pred CccccCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 012943 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (453)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~a 371 (453)
...- ..-+.+. +..-..|.+.+.|+++.
T Consensus 121 ~y~~-~~~~~l~---~~f~~ia~a~~lPiilY 148 (304)
T 3cpr_A 121 YYSK-PSQEGLL---AHFGAIAAATEVPICLY 148 (304)
T ss_dssp CSSC-CCHHHHH---HHHHHHHHHCCSCEEEE
T ss_pred CCCC-CCHHHHH---HHHHHHHHhcCCCEEEE
Confidence 3311 1112233 33333455668998875
No 211
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=54.48 E-value=47 Score=32.73 Aligned_cols=150 Identities=14% Similarity=0.145 Sum_probs=90.0
Q ss_pred CCCCCHhhHHHH-Hhhh-hcCCcEEEeccccCHHHHHHHHHHHHhcC---CCceEEEEecChhhhccHHHHHhh------
Q 012943 262 LPSITDKDWEDI-KFGV-DNQVDFYAVSFVKDAKVVHELKDYLKSCN---ADIHVIVKIESADSIPNLHSIISA------ 330 (453)
Q Consensus 262 lp~ltekD~~DI-~~a~-~~gvd~I~lSfV~sa~dv~~v~~~L~~~~---~~i~IIakIET~~gv~NldeI~~~------ 330 (453)
-|..|+.|.+.+ +.|. +.++..|+++ +..|..+++.|...+ .+++|.+-|==|.|-...+..+..
T Consensus 36 ~p~~T~e~I~~lc~eA~~~~~~aaVCV~----P~~V~~a~~~L~~~~~~~s~v~V~tVigFP~G~~~~e~K~~Ea~~Av~ 111 (297)
T 4eiv_A 36 TDGETNESVAAVCKIAAKDPAIVGVSVR----PAFVRFIRQELVKSAPEVAGIKVCAAVNFPEGTGTPDTVSLEAVGALK 111 (297)
T ss_dssp STTCCHHHHHHHHHHHHSSSCCSEEEEC----GGGHHHHHHTGGGTCGGGGGSEEEEEESTTTCCCCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhhcCcEEEEEC----HHHHHHHHHHhcccCcCCCCCeEEEEecCCCCCCCHHHHHHHHHHHHH
Confidence 466788887655 6677 6788877774 667788888886544 568888878666665555444432
Q ss_pred --cCEEEEeCCCccccCCC---------CCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHH-HHHH-HHHHH
Q 012943 331 --SDGAMVARGDLGAELPI---------EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDI-AIAVR 397 (453)
Q Consensus 331 --sDgImIgRGDLg~elg~---------e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAE-v~Dv-~nav~ 397 (453)
+|-| |+-+.+|. +.+..-.+.+.++|...-..||+-|-.| +..| +... --++.
T Consensus 112 ~GAdEI-----DmVinig~lk~~~~g~~~~V~~eI~~v~~a~~~~~lKVIlEt~~L---------t~~e~i~~A~~ia~~ 177 (297)
T 4eiv_A 112 DGADEI-----ECLIDWRRMNENVADGESRIRLLVSEVKKVVGPKTLKVVLSGGEL---------QGGDIISRAAVAALE 177 (297)
T ss_dssp TTCSEE-----EEECCTHHHHHCHHHHHHHHHHHHHHHHHHHTTSEEEEECCSSCC---------CCHHHHHHHHHHHHH
T ss_pred cCCCEE-----EeeeeHHHHhcccCCcHHHHHHHHHHHHHHhcCCceEEEEecccC---------CcHHHHHHHHHHHHH
Confidence 2222 11222221 2233344566666643334467655444 3344 3333 33567
Q ss_pred hCccEEEecCcccCCCCHHHHHHHHHHHHHHH
Q 012943 398 EGADAVMLSGETAHGKFPLKAVKVMHTVALRT 429 (453)
Q Consensus 398 ~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~a 429 (453)
.|+|.|=-|.-=..|.=-++.|+.|++.+++.
T Consensus 178 AGADFVKTSTGf~~~gAT~edV~lM~~~v~~~ 209 (297)
T 4eiv_A 178 GGADFLQTSSGLGATHATMFTVHLISIALREY 209 (297)
T ss_dssp HTCSEEECCCSSSSCCCCHHHHHHHHHHHHHH
T ss_pred hCCCEEEcCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 89999987754433344579999999999754
No 212
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=54.38 E-value=77 Score=30.32 Aligned_cols=43 Identities=14% Similarity=0.057 Sum_probs=27.2
Q ss_pred HHHHHHH-Hc-CCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCccc
Q 012943 356 DIIRRCR-SM-QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETA 410 (453)
Q Consensus 356 ~Ii~~c~-~a-Gkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA 410 (453)
..+...+ .. ..|+|.. .+.-+ ..|+..++..|+|+|++..---
T Consensus 233 ~~i~~v~~~~~~ipvi~~---------GGI~~---~~da~~~l~~GAd~V~ig~~~l 277 (314)
T 2e6f_A 233 ANVNAFYRRCPDKLVFGC---------GGVYS---GEDAFLHILAGASMVQVGTALQ 277 (314)
T ss_dssp HHHHHHHHHCTTSEEEEE---------SSCCS---HHHHHHHHHHTCSSEEECHHHH
T ss_pred HHHHHHHHhcCCCCEEEE---------CCCCC---HHHHHHHHHcCCCEEEEchhhH
Confidence 3444444 44 6777763 33444 4467788889999999975433
No 213
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=54.36 E-value=1.3e+02 Score=27.53 Aligned_cols=146 Identities=12% Similarity=0.099 Sum_probs=84.2
Q ss_pred HHHHhhhhcCCcEEEeccc-------cCHHHHHHHHHHHHhcCCCceEEEE-ec--C----hhhhccHHHHHhh-----c
Q 012943 271 EDIKFGVDNQVDFYAVSFV-------KDAKVVHELKDYLKSCNADIHVIVK-IE--S----ADSIPNLHSIISA-----S 331 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lSfV-------~sa~dv~~v~~~L~~~~~~i~IIak-IE--T----~~gv~NldeI~~~-----s 331 (453)
+.|+.+.+.|.|+|-+... .+..++.++++.+.+.|-.+..+.- .- . .+.++.+.+.+.. +
T Consensus 19 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~ 98 (286)
T 3dx5_A 19 DIVQFAYENGFEGIELWGTHAQNLYMQEYETTERELNCLKDKTLEITMISDYLDISLSADFEKTIEKCEQLAILANWFKT 98 (286)
T ss_dssp HHHHHHHHTTCCEEEEEHHHHHHHHHHCHHHHHHHHHHTGGGTCCEEEEECCCCCSTTSCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhCCCEEEEcccccccccccCHHHHHHHHHHHHHcCCeEEEEecCCCCCCchhHHHHHHHHHHHHHHHHHhCC
Confidence 4567778899999987432 1346777888888877655443321 10 0 2334445544443 5
Q ss_pred CEEEEeCCCccccCCC----CCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecC
Q 012943 332 DGAMVARGDLGAELPI----EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (453)
Q Consensus 332 DgImIgRGDLg~elg~----e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 407 (453)
..+.+-.|........ +.+....+++...|.++|..+.+ |.+-.....+..++.++...+. .+.+-+.-
T Consensus 99 ~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~l-----E~~~~~~~~~~~~~~~l~~~~~--~~~vg~~~ 171 (286)
T 3dx5_A 99 NKIRTFAGQKGSADFSQQERQEYVNRIRMICELFAQHNMYVLL-----ETHPNTLTDTLPSTLELLGEVD--HPNLKINL 171 (286)
T ss_dssp CEEEECSCSSCGGGSCHHHHHHHHHHHHHHHHHHHHTTCEEEE-----ECCTTSTTSSHHHHHHHHHHHC--CTTEEEEE
T ss_pred CEEEEcCCCCCcccCcHHHHHHHHHHHHHHHHHHHHhCCEEEE-----ecCCCcCcCCHHHHHHHHHhcC--CCCeEEEe
Confidence 6777766654322111 23445557788888899987665 3333344456666666666653 33333333
Q ss_pred ccc----CCCCHHHHHHHHH
Q 012943 408 ETA----HGKFPLKAVKVMH 423 (453)
Q Consensus 408 ETA----~G~yP~eaV~~m~ 423 (453)
+|. .|..|.++++.+.
T Consensus 172 D~~h~~~~g~d~~~~l~~~~ 191 (286)
T 3dx5_A 172 DFLHIWESGADPVDSFQQLR 191 (286)
T ss_dssp EHHHHHHTTCCHHHHHHHHG
T ss_pred ccccHhhcCCCHHHHHHHHH
Confidence 333 4777877766654
No 214
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=54.10 E-value=79 Score=30.86 Aligned_cols=97 Identities=6% Similarity=0.097 Sum_probs=56.5
Q ss_pred HHHHhhhhcCCcEEEec------cccCHHHHHH-HHHHHHhcCCCceEEEEec---ChhhhccHHHHHhh-cCEEEEeCC
Q 012943 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lS------fV~sa~dv~~-v~~~L~~~~~~i~IIakIE---T~~gv~NldeI~~~-sDgImIgRG 339 (453)
+.+++.++.|+|+|.+. +.-+.++-.+ ++..++..+.+++||+-+= |.++++......+. +|++|+-+-
T Consensus 47 ~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P 126 (315)
T 3si9_A 47 NFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVTP 126 (315)
T ss_dssp HHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 44577789999998752 2223333333 3444455567889998773 55666666555554 799998754
Q ss_pred CccccCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 012943 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (453)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~a 371 (453)
...- ..-+.+ ....-..|.+.+.|+++.
T Consensus 127 ~y~~-~~~~~l---~~~f~~va~a~~lPiilY 154 (315)
T 3si9_A 127 YYNR-PNQRGL---YTHFSSIAKAISIPIIIY 154 (315)
T ss_dssp CSSC-CCHHHH---HHHHHHHHHHCSSCEEEE
T ss_pred CCCC-CCHHHH---HHHHHHHHHcCCCCEEEE
Confidence 3321 111223 333333455568888876
No 215
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=54.09 E-value=1.3e+02 Score=29.01 Aligned_cols=97 Identities=13% Similarity=0.098 Sum_probs=58.3
Q ss_pred HHHHhhhhcCCcEEEe------ccccCHHHHHH-HHHHHHhcCCCceEEEEec---ChhhhccHHHHHhh-cCEEEEeCC
Q 012943 271 EDIKFGVDNQVDFYAV------SFVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~l------SfV~sa~dv~~-v~~~L~~~~~~i~IIakIE---T~~gv~NldeI~~~-sDgImIgRG 339 (453)
+.+++.++.|+|+|.+ ++.-+.++-.+ ++...+..+.+++||+-+= |.++++......+. +|++|+-+-
T Consensus 37 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 116 (301)
T 1xky_A 37 KLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVAP 116 (301)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 4457778999999876 22334444433 3444455567899999874 46777666665554 899998654
Q ss_pred CccccCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 012943 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (453)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~a 371 (453)
.+.. . .-..+.+..-..|.+.+.|+++.
T Consensus 117 ~y~~---~-s~~~l~~~f~~va~a~~lPiilY 144 (301)
T 1xky_A 117 YYNK---P-SQEGMYQHFKAIAESTPLPVMLY 144 (301)
T ss_dssp CSSC---C-CHHHHHHHHHHHHHTCSSCEEEE
T ss_pred CCCC---C-CHHHHHHHHHHHHHhcCCCEEEE
Confidence 3321 1 11222333334456668898875
No 216
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=54.05 E-value=58 Score=32.33 Aligned_cols=150 Identities=16% Similarity=0.159 Sum_probs=83.1
Q ss_pred HhhHHHHHhhhhcCCc--EEEeccccCHHHHHHHHHHHHhcCCCceEEEEe-cChhhhccHHHHHhh--c--CEEEEeCC
Q 012943 267 DKDWEDIKFGVDNQVD--FYAVSFVKDAKVVHELKDYLKSCNADIHVIVKI-ESADSIPNLHSIISA--S--DGAMVARG 339 (453)
Q Consensus 267 ekD~~DI~~a~~~gvd--~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakI-ET~~gv~NldeI~~~--s--DgImIgRG 339 (453)
..+-+-++.+++.|.+ .+.-|.-. +....+.....+.+ ..++++- .+.+-++.+-+.+.. . +-|++.||
T Consensus 141 T~~~eV~eaAleagag~~~lINsv~~--~~~~~m~~laa~~g--~~vVlmh~~d~~~~~~l~~~a~~~GI~~e~IIlDPg 216 (323)
T 4djd_D 141 EKDHEVLEAVAEAAAGENLLLGNAEQ--ENYKSLTAACMVHK--HNIIARSPLDINICKQLNILINEMNLPLDHIVIDPS 216 (323)
T ss_dssp HHHHHHHHHHHHHTTTSCCEEEEEBT--TBCHHHHHHHHHHT--CEEEEECSSCHHHHHHHHHHHHTTTCCGGGEEEECC
T ss_pred CCCHHHHHHHHHhcCCCCCeEEECCc--ccHHHHHHHHHHhC--CeEEEEccchHHHHHHHHHHHHHcCCCHHHEEEeCC
Confidence 5677888888888865 13223211 22233334444443 3455542 122233333333333 2 45888877
Q ss_pred CccccCCCCCHHHHHHHHHHHH----HHcCCCEEEEechhhhhccC-------------CCCchH---HHHHHHHHHHhC
Q 012943 340 DLGAELPIEDVPLLQEDIIRRC----RSMQKPVIVATNMLESMIDH-------------PTPTRA---EVSDIAIAVREG 399 (453)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c----~~aGkpvi~aTqmLeSM~~~-------------~~PtrA---Ev~Dv~nav~~G 399 (453)
=....-+.+.-....+++-+.+ +..|.|+++.+- =+||... +...|. |+.-.+.++..|
T Consensus 217 ~g~fgk~~e~~l~~l~~ir~~al~~~~~lg~PvL~GvS-rksf~~ke~~~~~~~~~~~g~~~~~~~~~E~~~a~~~~~~~ 295 (323)
T 4djd_D 217 IGGLGYGIEYSFSIMERIRLGALQGDKMLSMPVICTVG-YEAWRAKEASAPVSEYPGWGKETERGILWEAVTATALLQAG 295 (323)
T ss_dssp CCCTTTTHHHHHHHHHHHHHHHHHTCGGGCSCBEEEHH-HHHHTSHHHHCCTTTCGGGCCHHHHHHHHHHHHHHHHHTTT
T ss_pred CccccCCHHHHHHHHHHHHHHhhcccccCCCCEEEecc-hhhhhhccccccccccccccccchhhHHHHHHHHHHHHHhc
Confidence 6544444455555555555433 368999988521 1233332 111222 355567778899
Q ss_pred ccEEEecCcccCCCCHHHHHHHHHHHHHHH
Q 012943 400 ADAVMLSGETAHGKFPLKAVKVMHTVALRT 429 (453)
Q Consensus 400 ~D~vmLs~ETA~G~yP~eaV~~m~~I~~~a 429 (453)
+|.++|. +| ++|+++++++...
T Consensus 296 ~~i~v~~-------~p-~~~~~~~~~~~~l 317 (323)
T 4djd_D 296 AHILLMR-------HP-EAVARVKENIDQL 317 (323)
T ss_dssp CSEEEEC-------CH-HHHHHHHHHHHHH
T ss_pred CCEEEEc-------CH-HHHHHHHHHHHHH
Confidence 9999996 56 8999999887653
No 217
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=54.02 E-value=86 Score=31.02 Aligned_cols=97 Identities=14% Similarity=0.058 Sum_probs=57.9
Q ss_pred HHHHhhhhcCCcEEEec------cccCHHHHHH-HHHHHHhcCCCceEEEEec---ChhhhccHHHHHhh-cCEEEEeCC
Q 012943 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lS------fV~sa~dv~~-v~~~L~~~~~~i~IIakIE---T~~gv~NldeI~~~-sDgImIgRG 339 (453)
+.+++.++.|+|+|.+. +.-+.++-.+ ++..++..+.+++||+-+= |.++++......+. +|++|+-+-
T Consensus 56 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P 135 (343)
T 2v9d_A 56 ALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVINP 135 (343)
T ss_dssp HHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 44577789999998762 3334444433 3444455567899999874 56677666655554 899998654
Q ss_pred CccccCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 012943 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (453)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~a 371 (453)
.+.-- .-+.+...-+ ..|.+.+.|+++.
T Consensus 136 ~Y~~~-s~~~l~~~f~---~VA~a~~lPiilY 163 (343)
T 2v9d_A 136 YYWKV-SEANLIRYFE---QVADSVTLPVMLY 163 (343)
T ss_dssp SSSCC-CHHHHHHHHH---HHHHTCSSCEEEE
T ss_pred CCCCC-CHHHHHHHHH---HHHHhcCCCEEEE
Confidence 43211 1122333333 3355668888875
No 218
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=54.00 E-value=62 Score=31.22 Aligned_cols=131 Identities=12% Similarity=0.146 Sum_probs=76.4
Q ss_pred CCCHhhHHHHHhhhhcCCcEEEecccc-------------CHHHHHHHHHHHHhcCCCceEEEEecC------hhhhccH
Q 012943 264 SITDKDWEDIKFGVDNQVDFYAVSFVK-------------DAKVVHELKDYLKSCNADIHVIVKIES------ADSIPNL 324 (453)
Q Consensus 264 ~ltekD~~DI~~a~~~gvd~I~lSfV~-------------sa~dv~~v~~~L~~~~~~i~IIakIET------~~gv~Nl 324 (453)
.+|.+|.---+.+-+.|+|.|.+...- +-+++..-.+.+.+.-+...|++=.+- .++++|.
T Consensus 21 ~~tayD~~sA~l~e~aG~d~ilvGdsl~~~~lG~~dt~~vtldemi~h~~aV~r~~~~~~vvaD~pfgsy~~~~~a~~~a 100 (264)
T 1m3u_A 21 TITAYDYSFAKLFADEGLNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGAPNCLLLADLPFMAYATPEQAFENA 100 (264)
T ss_dssp EEECCSHHHHHHHHHHTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCTTSEEEEECCTTSSSSHHHHHHHH
T ss_pred EEeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCcCHHHHHHHHHHHHhhCCCCcEEEECCCCCcCCHHHHHHHH
Confidence 445666655555667899998875211 113333323334444455667766553 3567777
Q ss_pred HHHHhh-cCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEE----EEechhhh---hccCCCC-chHH--HHHHH
Q 012943 325 HSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVI----VATNMLES---MIDHPTP-TRAE--VSDIA 393 (453)
Q Consensus 325 deI~~~-sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi----~aTqmLeS---M~~~~~P-trAE--v~Dv~ 393 (453)
.+++++ +++|-+--|+ .+...|+++.++|.||+ +--|-... ....++. .+++ +.|.-
T Consensus 101 ~rl~kaGa~aVklEgg~------------e~~~~I~al~~agipV~gHiGLtPq~v~~~ggf~v~grt~~~a~~~i~rA~ 168 (264)
T 1m3u_A 101 ATVMRAGANMVKIEGGE------------WLVETVQMLTERAVPVCGHLGLTPQSVNIFGGYKVQGRGDEAGDQLLSDAL 168 (264)
T ss_dssp HHHHHTTCSEEECCCSG------------GGHHHHHHHHHTTCCEEEEEESCGGGHHHHTSSCCCCCSHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEECCcH------------HHHHHHHHHHHCCCCeEeeecCCceeecccCCeEEEeCCHHHHHHHHHHHH
Confidence 788876 7888885441 23455667778999987 21121111 1112222 2233 67777
Q ss_pred HHHHhCccEEEec
Q 012943 394 IAVREGADAVMLS 406 (453)
Q Consensus 394 nav~~G~D~vmLs 406 (453)
-....|+|+++|=
T Consensus 169 a~~eAGA~~ivlE 181 (264)
T 1m3u_A 169 ALEAAGAQLLVLE 181 (264)
T ss_dssp HHHHHTCCEEEEE
T ss_pred HHHHCCCcEEEEe
Confidence 7888999999994
No 219
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=53.78 E-value=1.2e+02 Score=28.13 Aligned_cols=115 Identities=18% Similarity=0.222 Sum_probs=69.1
Q ss_pred HHHHhhhhcCCcEEEe-----ccccC----HHHHHHHHHHHHhcCCCc--eEEEEecChhhhccHHHHHhh-cCEEEEeC
Q 012943 271 EDIKFGVDNQVDFYAV-----SFVKD----AKVVHELKDYLKSCNADI--HVIVKIESADSIPNLHSIISA-SDGAMVAR 338 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~l-----SfV~s----a~dv~~v~~~L~~~~~~i--~IIakIET~~gv~NldeI~~~-sDgImIgR 338 (453)
++++...+.|+|++-+ .||.+ +.-++.+|++. +.+. .+=.++++++. -++..+++ +|+|.+..
T Consensus 21 ~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G~~~v~~ir~~~---~~~~~~dvhLmv~~p~~--~i~~~~~aGad~itvH~ 95 (228)
T 3ovp_A 21 AECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQL---GQDPFFDMHMMVSKPEQ--WVKPMAVAGANQYTFHL 95 (228)
T ss_dssp HHHHHHHHTTCSCEEEEEEBSSSSSCBCBCHHHHHHHHHHH---CSSSCEEEEEECSCGGG--GHHHHHHHTCSEEEEEG
T ss_pred HHHHHHHHcCCCEEEEEecCCCcCcccccCHHHHHHHHHhh---CCCCcEEEEEEeCCHHH--HHHHHHHcCCCEEEEcc
Confidence 5556666789998887 77643 45566666543 2233 33347898865 36777666 89999952
Q ss_pred CCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEe-cCcccCC
Q 012943 339 GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVML-SGETAHG 412 (453)
Q Consensus 339 GDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmL-s~ETA~G 412 (453)
|-+ +. ..+.++.++++|+.++++.. ...|- | . ...+...+|.|++ |-+.-.|
T Consensus 96 -----Ea~-~~----~~~~i~~i~~~G~k~gval~-------p~t~~--e--~-l~~~l~~~D~Vl~msv~pGf~ 148 (228)
T 3ovp_A 96 -----EAT-EN----PGALIKDIRENGMKVGLAIK-------PGTSV--E--Y-LAPWANQIDMALVMTVEPGFG 148 (228)
T ss_dssp -----GGC-SC----HHHHHHHHHHTTCEEEEEEC-------TTSCG--G--G-TGGGGGGCSEEEEESSCTTTC
T ss_pred -----CCc-hh----HHHHHHHHHHcCCCEEEEEc-------CCCCH--H--H-HHHHhccCCeEEEeeecCCCC
Confidence 111 12 35678888999999998732 22222 2 1 1234456888875 4344333
No 220
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=53.41 E-value=56 Score=28.42 Aligned_cols=60 Identities=15% Similarity=0.104 Sum_probs=42.9
Q ss_pred eecCCCEEEEEeec--CC---CCccEEEecccccc-cccccCCEEEEe--CCe-eEEEEEEEeCCeEEE
Q 012943 180 ILKEGQEFNFTIKR--GV---STEDTVSVNYDDFV-NDVEVGDILLVD--GGM-MSLAVKSKTKDLVKC 239 (453)
Q Consensus 180 ~L~~G~~v~lt~~~--~~---~~~~~I~v~~~~l~-~~vk~Gd~IlID--DG~-I~L~V~ev~~~~v~~ 239 (453)
-++.|++..++... .+ +......++-..|. ..+++|+.+.+. ||. +..+|.+++++.|+.
T Consensus 56 gm~~Ge~~~v~ipp~~aYG~~~~~~v~~v~~~~f~~~~~~~G~~~~~~~~~G~~~~~~V~~v~~~~v~v 124 (151)
T 2kr7_A 56 KAQIGEWEEVVIAPEEAYGVYESSYLQEVPRDQFEGIELEKGMSVFGQTEDNQTIQAIIKDFSATHVMV 124 (151)
T ss_dssp TCCBTCEEEEEECGGGTTCSSCSCEEEEEEGGGGTTSCCCTTCEEEEEETTTEEEEEEEEEECSSEEEE
T ss_pred CCCCCCEEEEEEecHHHcCCCCcceEEEEcHHHcCCCCCccCCEEEEECCCCCEEEEEEEEECCCEEEE
Confidence 46799999988763 22 23345566666673 368999999987 575 677899998887654
No 221
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=53.15 E-value=23 Score=34.53 Aligned_cols=64 Identities=9% Similarity=0.058 Sum_probs=49.1
Q ss_pred HHHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhh--ccHHHHHhh-cCEEEEeC
Q 012943 270 WEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSI--PNLHSIISA-SDGAMVAR 338 (453)
Q Consensus 270 ~~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv--~NldeI~~~-sDgImIgR 338 (453)
.+.++.+++.|+|+|.+-.. ++++++++.+.+...+.++ +||=.-|+ +|+.++++. +|+|.+|.
T Consensus 204 ~eea~eal~aGaD~I~LDn~-~~~~~~~~v~~l~~~~~~v----~ieaSGGIt~~~i~~~a~tGVD~isvG~ 270 (284)
T 1qpo_A 204 LEQLDAVLPEKPELILLDNF-AVWQTQTAVQRRDSRAPTV----MLESSGGLSLQTAATYAETGVDYLAVGA 270 (284)
T ss_dssp HHHHHHHGGGCCSEEEEETC-CHHHHHHHHHHHHHHCTTC----EEEEESSCCTTTHHHHHHTTCSEEECGG
T ss_pred HHHHHHHHHcCCCEEEECCC-CHHHHHHHHHHhhccCCCe----EEEEECCCCHHHHHHHHhcCCCEEEECH
Confidence 45666777899999999874 7889988888887644454 45555554 889999988 99999986
No 222
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A*
Probab=52.76 E-value=26 Score=33.15 Aligned_cols=53 Identities=19% Similarity=0.263 Sum_probs=35.0
Q ss_pred CCHHHHHHHH-HhCCcEEEeecCCC---------ChHHHHHHHHHHHHHHhhcCCCcEEEEeecCC
Q 012943 112 SSREMIWKLA-EEGMNVARLNMSHG---------DHASHQKTIDLVKEYNSQFEDKAVAIMLDTKG 167 (453)
Q Consensus 112 ~s~e~i~~Li-~aGmnvaRiNfSHg---------~~e~~~~~I~~iR~a~~~~~~~~iaIllDLkG 167 (453)
-+.+.++.|. +.|+|++|+-++.. +++.+.+.++.+=+...+.+ +.+++|+-+
T Consensus 39 ~~~~di~~~~~~~G~N~vRi~~~~~~~~~~~~~~~p~~~~~~ld~~v~~a~~~G---i~vild~h~ 101 (293)
T 1tvn_A 39 YTAETVAKAKTEFNATLIRAAIGHGTSTGGSLNFDWEGNMSRLDTVVNAAIAED---MYVIIDFHS 101 (293)
T ss_dssp CSHHHHHHHHHHHCCSEEEEEEECCTTSTTSTTTCHHHHHHHHHHHHHHHHHTT---CEEEEEEEC
T ss_pred CCHHHHHHHHHhcCCCEEEEeccccCCCCCccccChHHHHHHHHHHHHHHHHCC---CEEEEEcCC
Confidence 4678899998 49999999987752 22444444444444445555 667788754
No 223
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A*
Probab=52.75 E-value=33 Score=33.64 Aligned_cols=55 Identities=20% Similarity=0.405 Sum_probs=35.6
Q ss_pred CCCHHHHHHHHHhCCcEEEeecCCCCh----------HHHHHHHHHHHHHHhhcCCCcEEEEeecCCC
Q 012943 111 TSSREMIWKLAEEGMNVARLNMSHGDH----------ASHQKTIDLVKEYNSQFEDKAVAIMLDTKGP 168 (453)
Q Consensus 111 s~s~e~i~~Li~aGmnvaRiNfSHg~~----------e~~~~~I~~iR~a~~~~~~~~iaIllDLkGP 168 (453)
-.+.+.|+.|-+.|+|++||-+++... +...+.++.+=+...+ +-+.+++|+-..
T Consensus 42 ~~t~~di~~i~~~G~n~vRipi~w~~~~~~~~~~~~~~~~l~~l~~~v~~a~~---~Gi~vildlH~~ 106 (345)
T 3ndz_A 42 MTTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFD---NDMYVIINLHHE 106 (345)
T ss_dssp CCCHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHT---TTCEEEECCCSC
T ss_pred CCcHHHHHHHHHCCCCEEEEeeehHHhCCCCCCCccCHHHHHHHHHHHHHHHH---CCCEEEEecCCc
Confidence 346899999999999999999885431 2222333333233333 447888998664
No 224
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=52.07 E-value=1.1e+02 Score=29.32 Aligned_cols=97 Identities=10% Similarity=0.098 Sum_probs=57.2
Q ss_pred HHHHhhhhcCCcEEEe------ccccCHHHHHH-HHHHHHhcCCCceEEEEec---ChhhhccHHHHHhh-cCEEEEeCC
Q 012943 271 EDIKFGVDNQVDFYAV------SFVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~l------SfV~sa~dv~~-v~~~L~~~~~~i~IIakIE---T~~gv~NldeI~~~-sDgImIgRG 339 (453)
+.+++.++.|+|+|.+ ++.-+.++-.+ ++...+..+.+++||+-+= |.++++......+. +|++|+-+-
T Consensus 25 ~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 104 (297)
T 2rfg_A 25 GLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLCVAG 104 (297)
T ss_dssp HHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 4457778999999875 22334444333 3444455567889999874 46677666655554 899999654
Q ss_pred CccccCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 012943 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (453)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~a 371 (453)
.+.- .+-+.+. +..-..|.+.+.|+++.
T Consensus 105 ~y~~-~s~~~l~---~~f~~va~a~~lPiilY 132 (297)
T 2rfg_A 105 YYNR-PSQEGLY---QHFKMVHDAIDIPIIVY 132 (297)
T ss_dssp TTTC-CCHHHHH---HHHHHHHHHCSSCEEEE
T ss_pred CCCC-CCHHHHH---HHHHHHHHhcCCCEEEE
Confidence 3321 1112233 33333355668888875
No 225
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=52.05 E-value=1.7e+02 Score=28.29 Aligned_cols=58 Identities=10% Similarity=0.117 Sum_probs=42.8
Q ss_pred cCCC-EEEEechhhhhccCCCCchHH-HHHHHHHHHhCccEEEecCcccCC----CCHHHHH--------HHHHHHHHHH
Q 012943 364 MQKP-VIVATNMLESMIDHPTPTRAE-VSDIAIAVREGADAVMLSGETAHG----KFPLKAV--------KVMHTVALRT 429 (453)
Q Consensus 364 aGkp-vi~aTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~D~vmLs~ETA~G----~yP~eaV--------~~m~~I~~~a 429 (453)
.+.| ++++ .+. +..+ ...+..++..|++++..-.-+-.- +-|.+++ +.|+.|+.+.
T Consensus 220 ~~~P~Vv~a---------GG~-~~~~~~~~~~~a~~aGa~Gv~vGRaI~q~~~~~~dp~~~~~~~~~~~~~~l~~iv~~~ 289 (304)
T 1to3_A 220 INMPWVILS---------SGV-DEKLFPRAVRVAMEAGASGFLAGRAVWSSVIGLPDTELMLRDVSAPKLQRLGEIVDEM 289 (304)
T ss_dssp CCSCEEECC---------TTS-CTTTHHHHHHHHHHTTCCEEEESHHHHGGGTTCSCHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEe---------cCC-CHHHHHHHHHHHHHcCCeEEEEehHHhCccccCCCHHHHHHhhchHHHHHHHHHHhcC
Confidence 5889 7764 233 3223 455677788899999987777666 8999999 9999998876
Q ss_pred hc
Q 012943 430 ES 431 (453)
Q Consensus 430 E~ 431 (453)
..
T Consensus 290 ~~ 291 (304)
T 1to3_A 290 MG 291 (304)
T ss_dssp HH
T ss_pred CC
Confidence 54
No 226
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=51.94 E-value=1.7e+02 Score=28.13 Aligned_cols=126 Identities=12% Similarity=0.110 Sum_probs=78.0
Q ss_pred HHHHhhhhcCCcEEEec--ccc---------CHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhhcCEEEEeCC
Q 012943 271 EDIKFGVDNQVDFYAVS--FVK---------DAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARG 339 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lS--fV~---------sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~sDgImIgRG 339 (453)
+-++.+.+.|+|.+-.- +.+ ..+.+..++++.++. .+.++.-+-.++.++-+.+ ..|.+-||-+
T Consensus 56 ~~a~~~k~~ga~~~k~~~~kprts~~~f~g~g~~gl~~l~~~~~~~--Gl~~~te~~d~~~~~~l~~---~vd~~kIgs~ 130 (276)
T 1vs1_A 56 EAALAVKEAGAHMLRGGAFKPRTSPYSFQGLGLEGLKLLRRAGDEA--GLPVVTEVLDPRHVETVSR---YADMLQIGAR 130 (276)
T ss_dssp HHHHHHHHHTCSEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH--TCCEEEECCCGGGHHHHHH---HCSEEEECGG
T ss_pred HHHHHHHHhCCCEEEeEEEeCCCChhhhcCCCHHHHHHHHHHHHHc--CCcEEEecCCHHHHHHHHH---hCCeEEECcc
Confidence 33455567788876331 111 156677788887665 4668887777777766555 4799999866
Q ss_pred CccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCC-CchHHHHHHHHHHH-hCc-cEEEecCcc-cCCCCH
Q 012943 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPT-PTRAEVSDIAIAVR-EGA-DAVMLSGET-AHGKFP 415 (453)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~-PtrAEv~Dv~nav~-~G~-D~vmLs~ET-A~G~yP 415 (453)
++- . ..+++.+.+.||||++. ++. .|..|+...++++. .|. +.+++-.-| ..-.||
T Consensus 131 ~~~------n-----~~ll~~~a~~~kPV~lk---------~G~~~t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~yp~y~ 190 (276)
T 1vs1_A 131 NMQ------N-----FPLLREVGRSGKPVLLK---------RGFGNTVEELLAAAEYILLEGNWQVVLVERGIRTFEPST 190 (276)
T ss_dssp GTT------C-----HHHHHHHHHHTCCEEEE---------CCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSS
T ss_pred ccc------C-----HHHHHHHHccCCeEEEc---------CCCCCCHHHHHHHHHHHHHcCCCeEEEEeCCcCCCCCcC
Confidence 653 2 23445555789999995 444 57788888887665 465 444443133 333566
Q ss_pred HHHHHH
Q 012943 416 LKAVKV 421 (453)
Q Consensus 416 ~eaV~~ 421 (453)
.+.|.+
T Consensus 191 ~~~vdl 196 (276)
T 1vs1_A 191 RFTLDV 196 (276)
T ss_dssp SSBCBH
T ss_pred cchhCH
Confidence 555443
No 227
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=51.43 E-value=35 Score=31.83 Aligned_cols=58 Identities=9% Similarity=0.074 Sum_probs=40.5
Q ss_pred HHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccCCCCHHHHHHHHHHHHH
Q 012943 354 QEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVAL 427 (453)
Q Consensus 354 qk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~ 427 (453)
-...++.++++|++|.+-|- .+ .+. +..+...++..|+|+++- .||..+.++++++|+
T Consensus 201 ~~~~v~~~~~~G~~v~~wTv------~~-~~n--~~~~~~~l~~~GvdgI~T-------D~p~~~~~~l~~~~~ 258 (258)
T 2o55_A 201 TKEQVCTAHEKGLSVTVWMP------WI-FDD--SEEDWKKCLELQVDLICS-------NYPFGLMNFLSNISE 258 (258)
T ss_dssp CHHHHHHHHHTTCEEEEECC------TT-CCC--CHHHHHHHHHHTCSEEEE-------SCHHHHHHHHTC---
T ss_pred CHHHHHHHHHCCCEEEEeeC------CC-CCC--CHHHHHHHHHcCCCEEEe-------CCHHHHHHHHHHhcC
Confidence 36788999999999998762 00 111 233455678889999886 699999999988774
No 228
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=51.41 E-value=96 Score=30.98 Aligned_cols=95 Identities=20% Similarity=0.234 Sum_probs=50.3
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEE-ecChhhhccHHHHHhh-cCEEEEeC-CCccccCCCCCHHHHHHHHHHHHHHcCCC
Q 012943 291 DAKVVHELKDYLKSCNADIHVIVK-IESADSIPNLHSIISA-SDGAMVAR-GDLGAELPIEDVPLLQEDIIRRCRSMQKP 367 (453)
Q Consensus 291 sa~dv~~v~~~L~~~~~~i~IIak-IET~~gv~NldeI~~~-sDgImIgR-GDLg~elg~e~v~~aqk~Ii~~c~~aGkp 367 (453)
+.+++..+++.. +.+|++| +-++ +......+. +|+|.+.- |-=....+...+ .+..++.++.. ..+|
T Consensus 217 ~~~~i~~lr~~~-----~~PvivK~v~~~---e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~-~~l~~v~~~v~-~~ip 286 (368)
T 2nli_A 217 SPRDIEEIAGHS-----GLPVFVKGIQHP---EDADMAIKRGASGIWVSNHGARQLYEAPGSF-DTLPAIAERVN-KRVP 286 (368)
T ss_dssp CHHHHHHHHHHS-----SSCEEEEEECSH---HHHHHHHHTTCSEEEECCGGGTSCSSCCCHH-HHHHHHHHHHT-TSSC
T ss_pred hHHHHHHHHHHc-----CCCEEEEcCCCH---HHHHHHHHcCCCEEEEcCCCcCCCCCCCChH-HHHHHHHHHhC-CCCe
Confidence 455666666543 4667777 3222 222222233 79999842 100012232222 22333333221 2578
Q ss_pred EEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecC
Q 012943 368 VIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (453)
Q Consensus 368 vi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 407 (453)
+|.. .+.-+ -.|+..++..|+|+||+..
T Consensus 287 Via~---------GGI~~---g~D~~kalalGAd~V~iGr 314 (368)
T 2nli_A 287 IVFD---------SGVRR---GEHVAKALASGADVVALGR 314 (368)
T ss_dssp EEEC---------SSCCS---HHHHHHHHHTTCSEEEECH
T ss_pred EEEE---------CCCCC---HHHHHHHHHcCCCEEEECH
Confidence 8763 44444 5678899999999999864
No 229
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=51.36 E-value=1.4e+02 Score=29.93 Aligned_cols=34 Identities=15% Similarity=0.180 Sum_probs=22.4
Q ss_pred HHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhC-ccEEEecCc
Q 012943 362 RSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREG-ADAVMLSGE 408 (453)
Q Consensus 362 ~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G-~D~vmLs~E 408 (453)
++.+.|++.. ... + ..+...++..| +|+|++...
T Consensus 296 ~~~~iPvi~~---------Ggi-~---~~~a~~~l~~g~aD~V~igR~ 330 (377)
T 2r14_A 296 QRFKGGLIYC---------GNY-D---AGRAQARLDDNTADAVAFGRP 330 (377)
T ss_dssp HHCCSEEEEE---------SSC-C---HHHHHHHHHTTSCSEEEESHH
T ss_pred HHCCCCEEEE---------CCC-C---HHHHHHHHHCCCceEEeecHH
Confidence 3457888874 223 4 33455778888 999999644
No 230
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=51.08 E-value=1.2e+02 Score=28.60 Aligned_cols=132 Identities=19% Similarity=0.222 Sum_probs=76.3
Q ss_pred HHHHhhhhcCCcEEEe-----cccc----CHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh-cCEEEEeCCC
Q 012943 271 EDIKFGVDNQVDFYAV-----SFVK----DAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGD 340 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~l-----SfV~----sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~-sDgImIgRGD 340 (453)
+.++...+.|+|++-+ .||. .+.-++.+|++.. +..+-+=.+|++++.. ++..+++ +|.+-+...
T Consensus 44 ~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~~p--~~~ldvHLmv~~p~~~--i~~~~~aGAd~itvH~E- 118 (246)
T 3inp_A 44 DDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGI--TAGMDVHLMVKPVDAL--IESFAKAGATSIVFHPE- 118 (246)
T ss_dssp HHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHHTC--CSCEEEEEECSSCHHH--HHHHHHHTCSEEEECGG-
T ss_pred HHHHHHHHcCCCEEEEEecCCCcCcchhcCHHHHHHHHHhCC--CCeEEEEEeeCCHHHH--HHHHHHcCCCEEEEccc-
Confidence 4455556678887755 5554 3455555555420 1223333578998765 6666665 899998521
Q ss_pred ccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEe-cCcccC-C----CC
Q 012943 341 LGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVML-SGETAH-G----KF 414 (453)
Q Consensus 341 Lg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmL-s~ETA~-G----~y 414 (453)
-. +. ..+.++.++++|+.++++.. ...|- | ....+.++.|.|++ |-+.-. | .+
T Consensus 119 ----a~-~~----~~~~i~~ir~~G~k~Gvaln-------p~Tp~--e---~l~~~l~~vD~VlvMsV~PGfgGQ~fi~~ 177 (246)
T 3inp_A 119 ----AS-EH----IDRSLQLIKSFGIQAGLALN-------PATGI--D---CLKYVESNIDRVLIMSVNPGFGGQKFIPA 177 (246)
T ss_dssp ----GC-SC----HHHHHHHHHTTTSEEEEEEC-------TTCCS--G---GGTTTGGGCSEEEEECSCTTC--CCCCTT
T ss_pred ----cc-hh----HHHHHHHHHHcCCeEEEEec-------CCCCH--H---HHHHHHhcCCEEEEeeecCCCCCcccchH
Confidence 11 22 26778888999999999732 22232 2 12345567998876 333222 2 34
Q ss_pred HHHHHHHHHHHHHH
Q 012943 415 PLKAVKVMHTVALR 428 (453)
Q Consensus 415 P~eaV~~m~~I~~~ 428 (453)
.++=|+.+++.+.+
T Consensus 178 ~l~KI~~lr~~~~~ 191 (246)
T 3inp_A 178 MLDKAKEISKWISS 191 (246)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 55666666666554
No 231
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=50.92 E-value=1.5e+02 Score=29.42 Aligned_cols=128 Identities=14% Similarity=0.146 Sum_probs=66.3
Q ss_pred CCCHhhHHHH--------HhhhhcCCcEEEecccc-------------C------------HHHHHHHHHHHHh-cCCCc
Q 012943 264 SITDKDWEDI--------KFGVDNQVDFYAVSFVK-------------D------------AKVVHELKDYLKS-CNADI 309 (453)
Q Consensus 264 ~ltekD~~DI--------~~a~~~gvd~I~lSfV~-------------s------------a~dv~~v~~~L~~-~~~~i 309 (453)
.||..|++.+ +.+.+.|+|+|=+.... . ..-+.++-+.+.+ .+.+.
T Consensus 147 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~ 226 (363)
T 3l5l_A 147 EMTLDDIARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENL 226 (363)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCc
Confidence 5788888777 23467899998765321 1 1112233333333 35677
Q ss_pred eEEEEecC---h----hhhccHHHHHhh-----cCEEEEeCCCcccc--C--CC-CCHHHHHHHHHHHHHHcCCCEEEEe
Q 012943 310 HVIVKIES---A----DSIPNLHSIISA-----SDGAMVARGDLGAE--L--PI-EDVPLLQEDIIRRCRSMQKPVIVAT 372 (453)
Q Consensus 310 ~IIakIET---~----~gv~NldeI~~~-----sDgImIgRGDLg~e--l--g~-e~v~~aqk~Ii~~c~~aGkpvi~aT 372 (453)
.|..||-- . ..++...++++. .|.|-+.-|...-. . +. ..+.. .+++ .+..+.|++..
T Consensus 227 pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~-~~~i---r~~~~iPVi~~- 301 (363)
T 3l5l_A 227 PLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPI-AERV---RREAKLPVTSA- 301 (363)
T ss_dssp CEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHH-HHHH---HHHHTCCEEEC-
T ss_pred eEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHH-HHHH---HHHcCCcEEEe-
Confidence 78888832 1 112333333332 68887765543221 1 11 11221 1222 22347898873
Q ss_pred chhhhhccCCCCchHHHHHHHHHHHhC-ccEEEecC
Q 012943 373 NMLESMIDHPTPTRAEVSDIAIAVREG-ADAVMLSG 407 (453)
Q Consensus 373 qmLeSM~~~~~PtrAEv~Dv~nav~~G-~D~vmLs~ 407 (453)
...-+. .++..++..| +|.|++..
T Consensus 302 --------GgI~s~---e~a~~~l~~G~aD~V~iGR 326 (363)
T 3l5l_A 302 --------WGFGTP---QLAEAALQANQLDLVSVGR 326 (363)
T ss_dssp --------SSTTSH---HHHHHHHHTTSCSEEECCH
T ss_pred --------CCCCCH---HHHHHHHHCCCccEEEecH
Confidence 222232 2344778888 99999863
No 232
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=50.17 E-value=18 Score=37.71 Aligned_cols=57 Identities=23% Similarity=0.333 Sum_probs=34.8
Q ss_pred CCHHHHHHHHHhCCcEEEeecCCCCh-------HHHHHHHHHHHHHHhhcCCCcEEEEeecCCC
Q 012943 112 SSREMIWKLAEEGMNVARLNMSHGDH-------ASHQKTIDLVKEYNSQFEDKAVAIMLDTKGP 168 (453)
Q Consensus 112 ~s~e~i~~Li~aGmnvaRiNfSHg~~-------e~~~~~I~~iR~a~~~~~~~~iaIllDLkGP 168 (453)
.+.+.|+.|-+.|+|++||-+++... ..-.+.++.++++.+.+..+-+.+++|+-..
T Consensus 46 ~t~~di~~i~~~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~~d~vv~~a~~~Gi~vildlH~~ 109 (515)
T 3icg_A 46 TTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDNDMYVIINLHHE 109 (515)
T ss_dssp CCHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEEECCSC
T ss_pred CCHHHHHHHHHCCCCEEEEccchHHhCCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEecCCC
Confidence 36899999999999999998875421 1111222333332222222447889998665
No 233
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=49.68 E-value=94 Score=28.70 Aligned_cols=134 Identities=16% Similarity=0.172 Sum_probs=70.5
Q ss_pred HHHHhhhhcCCcEEEe-----ccccCH----HHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh-cCEEEEeCCC
Q 012943 271 EDIKFGVDNQVDFYAV-----SFVKDA----KVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGD 340 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~l-----SfV~sa----~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~-sDgImIgRGD 340 (453)
+.++.+.+.|+|++=+ +||.+. +.++.++++. +....+-.+|++++- -++..+++ +||+.+.-.-
T Consensus 21 ~~i~~~~~~Gad~ihldi~DG~fvp~~~~g~~~v~~lr~~~---~~~~~vhlmv~dp~~--~i~~~~~aGadgv~vh~e~ 95 (230)
T 1tqj_A 21 EEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPLT---KKTLDVHLMIVEPEK--YVEDFAKAGADIISVHVEH 95 (230)
T ss_dssp HHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHGGGC---CSEEEEEEESSSGGG--THHHHHHHTCSEEEEECST
T ss_pred HHHHHHHHcCCCEEEEEEEecCCCcchhhhHHHHHHHHhhc---CCcEEEEEEccCHHH--HHHHHHHcCCCEEEECccc
Confidence 4456666778887532 333222 3333333321 122333367887743 35555555 8999996210
Q ss_pred ccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecC-c--ccCCCCHHH
Q 012943 341 LGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG-E--TAHGKFPLK 417 (453)
Q Consensus 341 Lg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~-E--TA~G~yP~e 417 (453)
... + .-.+.++.++++|+.+++++. ...| .| ....+..++|.+++.+ + |..-+|+..
T Consensus 96 ~~~----~----~~~~~~~~i~~~g~~~gv~~~-------p~t~--~e---~~~~~~~~~D~v~~msv~pg~ggq~~~~~ 155 (230)
T 1tqj_A 96 NAS----P----HLHRTLCQIRELGKKAGAVLN-------PSTP--LD---FLEYVLPVCDLILIMSVNPGFGGQSFIPE 155 (230)
T ss_dssp TTC----T----THHHHHHHHHHTTCEEEEEEC-------TTCC--GG---GGTTTGGGCSEEEEESSCC----CCCCGG
T ss_pred ccc----h----hHHHHHHHHHHcCCcEEEEEe-------CCCc--HH---HHHHHHhcCCEEEEEEeccccCCccCcHH
Confidence 011 1 134677888999999998731 1122 22 1245667899875432 2 222256655
Q ss_pred HHHHHHHHHHHH
Q 012943 418 AVKVMHTVALRT 429 (453)
Q Consensus 418 aV~~m~~I~~~a 429 (453)
..+.++++....
T Consensus 156 ~~~~i~~lr~~~ 167 (230)
T 1tqj_A 156 VLPKIRALRQMC 167 (230)
T ss_dssp GHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 555555555544
No 234
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=49.53 E-value=1.2e+02 Score=29.58 Aligned_cols=97 Identities=13% Similarity=0.127 Sum_probs=56.1
Q ss_pred HHHHhhhhcCCcEEEec------cccCHHHHHH-HHHHHHhcCCCceEEEEec--ChhhhccHHHHHhh-cCEEEEeCCC
Q 012943 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKIE--SADSIPNLHSIISA-SDGAMVARGD 340 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lS------fV~sa~dv~~-v~~~L~~~~~~i~IIakIE--T~~gv~NldeI~~~-sDgImIgRGD 340 (453)
+.+++.++.|+|+|.+. +.-+.++-.+ ++..++..+.+++||+-+= |.++++......+. +|++++-+-.
T Consensus 37 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~st~~ai~la~~A~~~Gadavlv~~P~ 116 (314)
T 3d0c_A 37 DNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIGYSVDTAIELGKSAIDSGADCVMIHQPV 116 (314)
T ss_dssp HHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHTTCSEEEECCCC
T ss_pred HHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCcCHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 44477789999998652 2233333333 3444555667899999875 44555544444333 7999996543
Q ss_pred ccccCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 012943 341 LGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (453)
Q Consensus 341 Lg~elg~e~v~~aqk~Ii~~c~~aGkpvi~a 371 (453)
+.- ..-..+.+..-..|.+.+.|+++.
T Consensus 117 y~~----~s~~~l~~~f~~va~a~~lPiilY 143 (314)
T 3d0c_A 117 HPY----ITDAGAVEYYRNIIEALDAPSIIY 143 (314)
T ss_dssp CSC----CCHHHHHHHHHHHHHHSSSCEEEE
T ss_pred CCC----CCHHHHHHHHHHHHHhCCCCEEEE
Confidence 321 111222333334466678998885
No 235
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=49.45 E-value=31 Score=34.57 Aligned_cols=70 Identities=19% Similarity=0.155 Sum_probs=42.5
Q ss_pred HHHHhhhhcCCcEEEecc------------ccCHHHHHHHHHH----HHhcCC-CceEEEEecChhhhccHHHHHhh---
Q 012943 271 EDIKFGVDNQVDFYAVSF------------VKDAKVVHELKDY----LKSCNA-DIHVIVKIESADSIPNLHSIISA--- 330 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lSf------------V~sa~dv~~v~~~----L~~~~~-~i~IIakIET~~gv~NldeI~~~--- 330 (453)
++.+.+.+.|+|+|.++. +.+.+.+.++++. +.+.+. +++||+ --|+.+-.+|+++
T Consensus 223 e~a~~~~~~Gad~i~vg~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia----~GGI~~~~dv~kalal 298 (393)
T 2qr6_A 223 TTALHMMRTGAVGIIVGGGENTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIA----DGSIENSGDVVKAIAC 298 (393)
T ss_dssp HHHHHHHTTTCSEEEESCCSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEE----CSSCCSHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECCCcccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEE----ECCCCCHHHHHHHHHc
Confidence 445666789999999864 2233334444443 232343 388887 2345555555554
Q ss_pred -cCEEEEeCCCcccc
Q 012943 331 -SDGAMVARGDLGAE 344 (453)
Q Consensus 331 -sDgImIgRGDLg~e 344 (453)
+|++++||.=|...
T Consensus 299 GA~~V~iG~~~l~~~ 313 (393)
T 2qr6_A 299 GADAVVLGSPLARAE 313 (393)
T ss_dssp TCSEEEECGGGGGST
T ss_pred CCCEEEECHHHHcCC
Confidence 89999999865544
No 236
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=49.18 E-value=1.2e+02 Score=29.48 Aligned_cols=132 Identities=13% Similarity=0.139 Sum_probs=74.3
Q ss_pred CCCCHhhHHHHHhhhhcCCcEEEeccc-------------cCHHHHHHHHHHHHhcCCCceEEEEec------C-hhhhc
Q 012943 263 PSITDKDWEDIKFGVDNQVDFYAVSFV-------------KDAKVVHELKDYLKSCNADIHVIVKIE------S-ADSIP 322 (453)
Q Consensus 263 p~ltekD~~DI~~a~~~gvd~I~lSfV-------------~sa~dv~~v~~~L~~~~~~i~IIakIE------T-~~gv~ 322 (453)
..+|.+|.---+.+-+.|+|.|.+... -+.+++....+.+.+.-....|++=++ + .++++
T Consensus 37 ~~~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~~s~~~a~~ 116 (281)
T 1oy0_A 37 AMLTAYDYSTARIFDEAGIPVLLVGDSAANVVYGYDTTVPISIDELIPLVRGVVRGAPHALVVADLPFGSYEAGPTAALA 116 (281)
T ss_dssp EEEECCSHHHHHHHHTTTCCEEEECTTHHHHTTCCSSSSSCCGGGTHHHHHHHHHHCTTSEEEEECCTTSSTTCHHHHHH
T ss_pred EEEeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhcCCCCeEEEECCCCcccCCHHHHHH
Confidence 345566665555556789998876421 123344333333444445566766555 2 34677
Q ss_pred cHHHHHh-h-cCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEE----ech---hhhhccCCCCchHH--HHH
Q 012943 323 NLHSIIS-A-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA----TNM---LESMIDHPTPTRAE--VSD 391 (453)
Q Consensus 323 NldeI~~-~-sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~a----Tqm---LeSM~~~~~PtrAE--v~D 391 (453)
|.-.+++ + +++|-+--|+ .+...|+++.++|.||+-- -|- +......++..+++ +.|
T Consensus 117 na~rl~~eaGa~aVklEdg~------------e~~~~I~al~~agIpV~gHiGLtPqsv~~~ggf~v~grt~~a~~~i~r 184 (281)
T 1oy0_A 117 AATRFLKDGGAHAVKLEGGE------------RVAEQIACLTAAGIPVMAHIGFTPQSVNTLGGFRVQGRGDAAEQTIAD 184 (281)
T ss_dssp HHHHHHHTTCCSEEEEEBSG------------GGHHHHHHHHHHTCCEEEEEECCC--------------CHHHHHHHHH
T ss_pred HHHHHHHHhCCeEEEECCcH------------HHHHHHHHHHHCCCCEEeeecCCcceecccCCeEEEeCcHHHHHHHHH
Confidence 7788887 3 7899885441 2345566677899998711 111 11111111111334 777
Q ss_pred HHHHHHhCccEEEec
Q 012943 392 IAIAVREGADAVMLS 406 (453)
Q Consensus 392 v~nav~~G~D~vmLs 406 (453)
.--....|+|+++|=
T Consensus 185 A~a~~eAGA~~ivlE 199 (281)
T 1oy0_A 185 AIAVAEAGAFAVVME 199 (281)
T ss_dssp HHHHHHHTCSEEEEE
T ss_pred HHHHHHcCCcEEEEe
Confidence 778888999999994
No 237
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=49.13 E-value=1.4e+02 Score=28.76 Aligned_cols=97 Identities=13% Similarity=0.153 Sum_probs=56.4
Q ss_pred HHHHhhhhcCCcEEEe------ccccCHHHHHH-HHHHHHhcCCCceEEEEec---ChhhhccHHHHHhh-cCEEEEeCC
Q 012943 271 EDIKFGVDNQVDFYAV------SFVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~l------SfV~sa~dv~~-v~~~L~~~~~~i~IIakIE---T~~gv~NldeI~~~-sDgImIgRG 339 (453)
+.+++.++.|+|+|.+ ++.-+.++-.+ ++...+..+.+++||+-+= |.++++......+. +|++|+-+-
T Consensus 37 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P 116 (306)
T 1o5k_A 37 RLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTP 116 (306)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECCC
Confidence 4457778899999876 23334444433 3444455567889999873 46666666655444 899998654
Q ss_pred CccccCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 012943 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (453)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~a 371 (453)
.+.- ..-+.+. +..-..|.+.+.|+++.
T Consensus 117 ~y~~-~s~~~l~---~~f~~va~a~~lPiilY 144 (306)
T 1o5k_A 117 YYNK-PTQEGLY---QHYKYISERTDLGIVVY 144 (306)
T ss_dssp CSSC-CCHHHHH---HHHHHHHTTCSSCEEEE
T ss_pred CCCC-CCHHHHH---HHHHHHHHhCCCCEEEE
Confidence 3321 0112222 22223355567887775
No 238
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=49.10 E-value=11 Score=36.96 Aligned_cols=64 Identities=20% Similarity=0.221 Sum_probs=46.9
Q ss_pred HHHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhh--ccHHHHHhh-cCEEEEeC
Q 012943 270 WEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSI--PNLHSIISA-SDGAMVAR 338 (453)
Q Consensus 270 ~~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv--~NldeI~~~-sDgImIgR 338 (453)
.+.+..+++.|+|+|.+... ++++++++.+.+...+.++++ |=.-|+ +|+.++++. +|+|.+|.
T Consensus 203 leea~eA~~aGaD~I~LDn~-~~e~l~~av~~l~~~~~~v~i----eASGGIt~eni~~~a~tGVD~IsvGs 269 (285)
T 1o4u_A 203 LEDALRAVEAGADIVMLDNL-SPEEVKDISRRIKDINPNVIV----EVSGGITEENVSLYDFETVDVISSSR 269 (285)
T ss_dssp HHHHHHHHHTTCSEEEEESC-CHHHHHHHHHHHHHHCTTSEE----EEEECCCTTTGGGGCCTTCCEEEEGG
T ss_pred HHHHHHHHHcCCCEEEECCC-CHHHHHHHHHHhhccCCCceE----EEECCCCHHHHHHHHHcCCCEEEEeH
Confidence 56667778899999999874 788998888888654445443 333333 677777776 89999986
No 239
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=49.10 E-value=1.7e+02 Score=27.42 Aligned_cols=91 Identities=15% Similarity=0.174 Sum_probs=48.1
Q ss_pred HHHHHhhhhcCCcEEE--eccccC---H-----------------HHHHHHHHHHHhcCCCceEEEEe-cCh---hhhcc
Q 012943 270 WEDIKFGVDNQVDFYA--VSFVKD---A-----------------KVVHELKDYLKSCNADIHVIVKI-ESA---DSIPN 323 (453)
Q Consensus 270 ~~DI~~a~~~gvd~I~--lSfV~s---a-----------------~dv~~v~~~L~~~~~~i~IIakI-ET~---~gv~N 323 (453)
.+.++...+.|+|+|- +||..- . +.+.++-+.+++.+.+++++.+. .++ -|+++
T Consensus 34 ~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~lm~y~n~v~~~g~~~ 113 (268)
T 1qop_A 34 LKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGLLMYANLVFNNGIDA 113 (268)
T ss_dssp HHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEEEECHHHHHTTCHHH
T ss_pred HHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEEcccHHHHhhHHH
Confidence 4555666678999864 465321 1 11112222233333356676654 332 13333
Q ss_pred H-HHHHhh-cCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEE
Q 012943 324 L-HSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIV 370 (453)
Q Consensus 324 l-deI~~~-sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~ 370 (453)
+ ++..++ +||+++. |+.. ++ ..+.+..|+++|...+.
T Consensus 114 ~~~~~~~aGadgii~~--d~~~----e~----~~~~~~~~~~~g~~~i~ 152 (268)
T 1qop_A 114 FYARCEQVGVDSVLVA--DVPV----EE----SAPFRQAALRHNIAPIF 152 (268)
T ss_dssp HHHHHHHHTCCEEEET--TCCG----GG----CHHHHHHHHHTTCEEEC
T ss_pred HHHHHHHcCCCEEEEc--CCCH----HH----HHHHHHHHHHcCCcEEE
Confidence 3 333333 7999984 5542 33 35667889999987554
No 240
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=48.38 E-value=32 Score=31.46 Aligned_cols=136 Identities=14% Similarity=0.112 Sum_probs=67.8
Q ss_pred HHhhhhcCCcEEEec-----cccCHHHHHHHHHHHHhcCCCceEEE--EecChhhhccHHHHHhh-cCEEEEeCCCcccc
Q 012943 273 IKFGVDNQVDFYAVS-----FVKDAKVVHELKDYLKSCNADIHVIV--KIESADSIPNLHSIISA-SDGAMVARGDLGAE 344 (453)
Q Consensus 273 I~~a~~~gvd~I~lS-----fV~sa~dv~~v~~~L~~~~~~i~IIa--kIET~~gv~NldeI~~~-sDgImIgRGDLg~e 344 (453)
.+...+.|+|+|-+. |...... ..+++..+.. ++++++ .|.+++ .+++.++. +|++.+|+..|.-
T Consensus 37 a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~--~ipv~v~ggi~~~~---~~~~~l~~Gad~V~lg~~~l~~- 109 (244)
T 2y88_A 37 ALGWQRDGAEWIHLVDLDAAFGRGSNH-ELLAEVVGKL--DVQVELSGGIRDDE---SLAAALATGCARVNVGTAALEN- 109 (244)
T ss_dssp HHHHHHTTCSEEEEEEHHHHTTSCCCH-HHHHHHHHHC--SSEEEEESSCCSHH---HHHHHHHTTCSEEEECHHHHHC-
T ss_pred HHHHHHcCCCEEEEEcCcccccCCChH-HHHHHHHHhc--CCcEEEECCCCCHH---HHHHHHHcCCCEEEECchHhhC-
Confidence 345567899998773 4444433 3333333322 466666 466654 35556655 8999998766532
Q ss_pred CCCCCHHHHHHHHHHHHHHcCCCEEEEechh----h-h-hccCC---CCchHHHHHHHHHHHhCccEEEecCcccCCCCH
Q 012943 345 LPIEDVPLLQEDIIRRCRSMQKPVIVATNML----E-S-MIDHP---TPTRAEVSDIAIAVREGADAVMLSGETAHGKFP 415 (453)
Q Consensus 345 lg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmL----e-S-M~~~~---~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP 415 (453)
+ ..+.+..+..|..++++-... . + .++.. .++. ...+-.+...|+|.+++++=+.-|.|.
T Consensus 110 ------p---~~~~~~~~~~g~~~~~~ld~~~~~~~~~v~~~g~~~~~~~~--~e~~~~~~~~G~~~i~~~~~~~~~~~~ 178 (244)
T 2y88_A 110 ------P---QWCARVIGEHGDQVAVGLDVQIIDGEHRLRGRGWETDGGDL--WDVLERLDSEGCSRFVVTDITKDGTLG 178 (244)
T ss_dssp ------H---HHHHHHHHHHGGGEEEEEEEEEETTEEEEEEGGGTEEEEEH--HHHHHHHHHTTCCCEEEEETTTTTTTS
T ss_pred ------h---HHHHHHHHHcCCCEEEEEeccccCCCCEEEECCccCCCCCH--HHHHHHHHhCCCCEEEEEecCCccccC
Confidence 1 223333444454444332211 0 0 00000 0011 233445566799999987755544432
Q ss_pred HHHHHHHHHHH
Q 012943 416 LKAVKVMHTVA 426 (453)
Q Consensus 416 ~eaV~~m~~I~ 426 (453)
---.+.+.++.
T Consensus 179 g~~~~~~~~l~ 189 (244)
T 2y88_A 179 GPNLDLLAGVA 189 (244)
T ss_dssp CCCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 11233444443
No 241
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=47.79 E-value=30 Score=35.09 Aligned_cols=68 Identities=13% Similarity=0.189 Sum_probs=42.7
Q ss_pred HHHHHhhhhcCCcEEEecccc------CHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh----cCEEEEeCC
Q 012943 270 WEDIKFGVDNQVDFYAVSFVK------DAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA----SDGAMVARG 339 (453)
Q Consensus 270 ~~DI~~a~~~gvd~I~lSfV~------sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~----sDgImIgRG 339 (453)
.++.+.+.+.|+|+|.++--- ....+..+.+..+..+.+++||+ --|+.+-.+++++ +|++++||.
T Consensus 263 ~e~A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~av~~~ipVia----~GGI~~g~Dv~kalalGAd~V~iGr~ 338 (392)
T 2nzl_A 263 GDDAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFL----DGGVRKGTDVLKALALGAKAVFVGRP 338 (392)
T ss_dssp HHHHHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHHHTTSSEEEE----CSSCCSHHHHHHHHHTTCSEEEECHH
T ss_pred HHHHHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHHcCCCCEEEE----ECCCCCHHHHHHHHHhCCCeeEECHH
Confidence 345677788999999996321 12234444444333345688887 3466666666655 899999985
Q ss_pred Cc
Q 012943 340 DL 341 (453)
Q Consensus 340 DL 341 (453)
=|
T Consensus 339 ~l 340 (392)
T 2nzl_A 339 IV 340 (392)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 242
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=47.73 E-value=1.6e+02 Score=28.49 Aligned_cols=95 Identities=15% Similarity=0.095 Sum_probs=56.2
Q ss_pred HHHHhhhhcCCcEEEec------cccCHHHHHH-HHHHHHhcCCCceEEEEe---cChhhhccHHHHHhh-cCEEEEeCC
Q 012943 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKI---ESADSIPNLHSIISA-SDGAMVARG 339 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lS------fV~sa~dv~~-v~~~L~~~~~~i~IIakI---ET~~gv~NldeI~~~-sDgImIgRG 339 (453)
+.+++.++.|+|+|.+. +.-+.++-.+ ++..++.. .+++||+-+ -|.++++......+. +|++|+-+-
T Consensus 33 ~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~-grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 111 (313)
T 3dz1_A 33 RLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRA-KSMQVIVGVSAPGFAAMRRLARLSMDAGAAGVMIAPP 111 (313)
T ss_dssp HHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC-TTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHc-CCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 44577889999998762 2223334333 44445556 789999977 455666665555544 899999754
Q ss_pred CccccCCCCCHHHHHHHHHHHHHHcC--CCEEEE
Q 012943 340 DLGAELPIEDVPLLQEDIIRRCRSMQ--KPVIVA 371 (453)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aG--kpvi~a 371 (453)
.. - + .-..+.+..-..|.+.+ .|+++.
T Consensus 112 ~~--~-~--s~~~l~~~f~~va~a~~~~lPiilY 140 (313)
T 3dz1_A 112 PS--L-R--TDEQITTYFRQATEAIGDDVPWVLQ 140 (313)
T ss_dssp TT--C-C--SHHHHHHHHHHHHHHHCTTSCEEEE
T ss_pred CC--C-C--CHHHHHHHHHHHHHhCCCCCcEEEE
Confidence 41 1 1 12223333333455556 888875
No 243
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3
Probab=47.53 E-value=26 Score=33.00 Aligned_cols=53 Identities=11% Similarity=0.144 Sum_probs=34.3
Q ss_pred CCHHHHHHHH-HhCCcEEEeecCCC-------ChHHHHHHHHHHHHHHhhcCCCcEEEEeecCC
Q 012943 112 SSREMIWKLA-EEGMNVARLNMSHG-------DHASHQKTIDLVKEYNSQFEDKAVAIMLDTKG 167 (453)
Q Consensus 112 ~s~e~i~~Li-~aGmnvaRiNfSHg-------~~e~~~~~I~~iR~a~~~~~~~~iaIllDLkG 167 (453)
-+.+.++.|. ..|+|++|+-+... +++...+.++.+=+...+.+ +.+++|+-+
T Consensus 39 ~~~~d~~~l~~~~G~N~vR~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~G---i~vild~h~ 99 (291)
T 1egz_A 39 YTADTVASLKKDWKSSIVRAAMGVQESGGYLQDPAGNKAKVERVVDAAIAND---MYAIIGWHS 99 (291)
T ss_dssp CSHHHHHHHHHTTCCCEEEEEEECSSTTSTTTCHHHHHHHHHHHHHHHHHTT---CEEEEEEEC
T ss_pred CCHHHHHHHHHHcCCCEEEEeccccccCCCcCCHHHHHHHHHHHHHHHHHCC---CEEEEEcCC
Confidence 3678899998 79999999987643 23333344444444444545 667888743
No 244
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=47.19 E-value=2.6e+02 Score=28.90 Aligned_cols=150 Identities=12% Similarity=0.027 Sum_probs=90.3
Q ss_pred CCCHhhHHHH-HhhhhcCCcEEEecc----cc-----CHHHHHHHHHHHHhcCCCceEEEEec--Chhhhcc--------
Q 012943 264 SITDKDWEDI-KFGVDNQVDFYAVSF----VK-----DAKVVHELKDYLKSCNADIHVIVKIE--SADSIPN-------- 323 (453)
Q Consensus 264 ~ltekD~~DI-~~a~~~gvd~I~lSf----V~-----sa~dv~~v~~~L~~~~~~i~IIakIE--T~~gv~N-------- 323 (453)
.++..|+-.| ....+.|++.|=+.+ +. ++.+...++.+-+. ..++.+.+.+= +..|..+
T Consensus 26 ~~~~~dkl~Ia~~L~~~Gv~~IE~g~~atF~~~~r~~~~d~~e~l~~i~~~-~~~~~l~~l~R~~N~~G~~~~~ddv~~~ 104 (464)
T 2nx9_A 26 RLRIDDMLPIAQQLDQIGYWSLECWGGATFDSCIRFLGEDPWQRLRLLKQA-MPNTPLQMLLRGQNLLGYRHYADDVVDT 104 (464)
T ss_dssp CCCGGGTGGGHHHHHTSCCSEEEEEETTHHHHHHHTTCCCHHHHHHHHHHH-CSSSCEEEEECGGGTTSSSCCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCcCccccchhhccCCCHHHHHHHHHHh-CCCCeEEEEeccccccCcccccchhhHH
Confidence 4566676444 444568999887653 21 45555555554432 24455555442 2334322
Q ss_pred -HHHHHhh-cCEEEE--eCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHH-HHHh
Q 012943 324 -LHSIISA-SDGAMV--ARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI-AVRE 398 (453)
Q Consensus 324 -ldeI~~~-sDgImI--gRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~n-av~~ 398 (453)
++..++. .|.+-| +-.|+ ......++.++++|+.|..+- |+...+.-+...+.+++. +...
T Consensus 105 ~v~~a~~~Gvd~i~if~~~sd~----------~ni~~~i~~ak~~G~~v~~~i----~~~~~~~~~~e~~~~~a~~l~~~ 170 (464)
T 2nx9_A 105 FVERAVKNGMDVFRVFDAMNDV----------RNMQQALQAVKKMGAHAQGTL----CYTTSPVHNLQTWVDVAQQLAEL 170 (464)
T ss_dssp HHHHHHHTTCCEEEECCTTCCT----------HHHHHHHHHHHHTTCEEEEEE----ECCCCTTCCHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCcCEEEEEEecCHH----------HHHHHHHHHHHHCCCEEEEEE----EeeeCCCCCHHHHHHHHHHHHHC
Confidence 3333333 564444 22333 235678899999999875431 333344335555666554 5668
Q ss_pred CccEEEecCcccCCCCHHHHHHHHHHHHHHH
Q 012943 399 GADAVMLSGETAHGKFPLKAVKVMHTVALRT 429 (453)
Q Consensus 399 G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~a 429 (453)
|+|.+.| .+|+=+..|-++-+.++.+..+.
T Consensus 171 Gad~I~l-~DT~G~~~P~~v~~lv~~l~~~~ 200 (464)
T 2nx9_A 171 GVDSIAL-KDMAGILTPYAAEELVSTLKKQV 200 (464)
T ss_dssp TCSEEEE-EETTSCCCHHHHHHHHHHHHHHC
T ss_pred CCCEEEE-cCCCCCcCHHHHHHHHHHHHHhc
Confidence 9999998 48888889999988888887765
No 245
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=47.11 E-value=1.5e+02 Score=28.27 Aligned_cols=97 Identities=14% Similarity=0.155 Sum_probs=56.2
Q ss_pred HHHHhhhhcCCcEEEe------ccccCHHHHHH-HHHHHHhcCCCceEEEEec---ChhhhccHHHHHhh-cCEEEEeCC
Q 012943 271 EDIKFGVDNQVDFYAV------SFVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~l------SfV~sa~dv~~-v~~~L~~~~~~i~IIakIE---T~~gv~NldeI~~~-sDgImIgRG 339 (453)
+.+++.++.|+|+|.+ ++.-+.++-.+ ++...+..+.+++||+-+= |.++++......+. +|++|+-+-
T Consensus 25 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 104 (292)
T 2vc6_A 25 DLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVSP 104 (292)
T ss_dssp HHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 4457778899999875 22333433333 3444455566788998873 46666666555444 799998654
Q ss_pred CccccCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 012943 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (453)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~a 371 (453)
...-- .-+.+. +..-..|.+.+.|+++.
T Consensus 105 ~y~~~-s~~~l~---~~f~~ia~a~~lPiilY 132 (292)
T 2vc6_A 105 YYNKP-TQEGIY---QHFKAIDAASTIPIIVY 132 (292)
T ss_dssp CSSCC-CHHHHH---HHHHHHHHHCSSCEEEE
T ss_pred CCCCC-CHHHHH---HHHHHHHHhCCCCEEEE
Confidence 33210 112232 22333455668888874
No 246
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=46.67 E-value=19 Score=38.49 Aligned_cols=51 Identities=24% Similarity=0.351 Sum_probs=41.8
Q ss_pred CcEEEEecCCCCCCHHHHHHHHHhCCcEEEeecCCCChHHHHHHHHHHHHH
Q 012943 100 KTKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEY 150 (453)
Q Consensus 100 ~TKIi~TiGPss~s~e~i~~Li~aGmnvaRiNfSHg~~e~~~~~I~~iR~a 150 (453)
+-.+-+-+|-.-++.+.+..|+++|+|+.=|..+||..+...++++.||+.
T Consensus 269 rL~VgAAVgv~~d~~eR~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~~ 319 (556)
T 4af0_A 269 QLYCGAAIGTRPGDKDRLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQT 319 (556)
T ss_dssp CBCCEEEECSSHHHHHHHHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHHH
T ss_pred ceeeEEEeccCccHHHHHHHHHhcCCcEEEEeccccccHHHHHHHHHHHhh
Confidence 445666777666678899999999999999999999998887777777753
No 247
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=46.25 E-value=1.5e+02 Score=26.68 Aligned_cols=132 Identities=14% Similarity=0.054 Sum_probs=68.5
Q ss_pred HHHHHhhhhcCCcEEEeccc----cCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh-cCEEEEeCCCcccc
Q 012943 270 WEDIKFGVDNQVDFYAVSFV----KDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAE 344 (453)
Q Consensus 270 ~~DI~~a~~~gvd~I~lSfV----~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~-sDgImIgRGDLg~e 344 (453)
.+.++. +..|+|++=+.|+ ...+.++++++.. .+..+.+-.|+=.. +-.-+++.+++ +|++.+- ++
T Consensus 22 ~~~~~~-~~~~vd~ie~g~~~~~~~G~~~i~~lr~~~--~~~~i~ld~~l~d~-p~~~~~~~~~aGad~i~vh--~~--- 92 (218)
T 3jr2_A 22 VAVASN-VASYVDVIEVGTILAFAEGMKAVSTLRHNH--PNHILVCDMKTTDG-GAILSRMAFEAGADWITVS--AA--- 92 (218)
T ss_dssp HHHHHH-HGGGCSEEEECHHHHHHHTTHHHHHHHHHC--TTSEEEEEEEECSC-HHHHHHHHHHHTCSEEEEE--TT---
T ss_pred HHHHHH-hcCCceEEEeCcHHHHhcCHHHHHHHHHhC--CCCcEEEEEeeccc-HHHHHHHHHhcCCCEEEEe--cC---
Confidence 344444 4668998766554 2344444444431 02223333444321 11223555554 7888873 11
Q ss_pred CCCCCHHHHHHHHHHHHHHcCCCEEE-EechhhhhccCCCCchHHHHHHHHHHHhCccEEEe-cCccc--CC-CCHHHHH
Q 012943 345 LPIEDVPLLQEDIIRRCRSMQKPVIV-ATNMLESMIDHPTPTRAEVSDIAIAVREGADAVML-SGETA--HG-KFPLKAV 419 (453)
Q Consensus 345 lg~e~v~~aqk~Ii~~c~~aGkpvi~-aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmL-s~ETA--~G-~yP~eaV 419 (453)
+ -....+++++.++++|+.+++ . -++ +|..+ +..+...|+|.+.+ .+-++ .| .+..+.+
T Consensus 93 -~---~~~~~~~~~~~~~~~g~~~~~d~--------l~~-~T~~~---~~~~~~~g~d~v~~~~~~~~~~~g~~~~~~~l 156 (218)
T 3jr2_A 93 -A---HIATIAACKKVADELNGEIQIEI--------YGN-WTMQD---AKAWVDLGITQAIYHRSRDAELAGIGWTTDDL 156 (218)
T ss_dssp -S---CHHHHHHHHHHHHHHTCEEEEEC--------CSS-CCHHH---HHHHHHTTCCEEEEECCHHHHHHTCCSCHHHH
T ss_pred -C---CHHHHHHHHHHHHHhCCccceee--------eec-CCHHH---HHHHHHcCccceeeeeccccccCCCcCCHHHH
Confidence 1 123456788889999998764 2 122 34333 33445559997654 33222 13 3555667
Q ss_pred HHHHHHH
Q 012943 420 KVMHTVA 426 (453)
Q Consensus 420 ~~m~~I~ 426 (453)
+.+++++
T Consensus 157 ~~i~~~~ 163 (218)
T 3jr2_A 157 DKMRQLS 163 (218)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 7777765
No 248
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=46.18 E-value=2.1e+02 Score=27.62 Aligned_cols=124 Identities=19% Similarity=0.108 Sum_probs=64.9
Q ss_pred eecCCCccCCCCCCHhhHHHHHhhhhcCC-cEEEeccccCHHHHHHHHHHHHhcCCCceEEEEe--cChhhhccHHHHHh
Q 012943 253 LNVRGKSANLPSITDKDWEDIKFGVDNQV-DFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKI--ESADSIPNLHSIIS 329 (453)
Q Consensus 253 Vnlp~~~~~lp~ltekD~~DI~~a~~~gv-d~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakI--ET~~gv~NldeI~~ 329 (453)
+..|=..-++..++. .+....+.+.|. .+|...++ +++.+.+.-+.+.+.-. .++.+.+ -++.--+.++...+
T Consensus 11 ~~~Pii~apM~g~s~--~~la~av~~aG~lG~i~~~~~-~~~~~~~~i~~i~~~~~-~p~gvnl~~~~~~~~~~~~~a~~ 86 (332)
T 2z6i_A 11 IDYPIFQGGMAWVAD--GDLAGAVSKAGGLGIIGGGNA-PKEVVKANIDKIKSLTD-KPFGVNIMLLSPFVEDIVDLVIE 86 (332)
T ss_dssp CSSSEEECCCTTTCC--HHHHHHHHHHTSBEEEECTTC-CHHHHHHHHHHHHHHCC-SCEEEEECTTSTTHHHHHHHHHH
T ss_pred CCCCEEeCCCCCCCc--HHHHHHHHhCCCcEEeCCCCC-CHHHHHHHHHHHHHhcC-CCEEEEecCCCCCHHHHHHHHHH
Confidence 444433334444453 445555666675 66766654 56655543333433222 2223333 23321122232333
Q ss_pred h-cCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecC
Q 012943 330 A-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (453)
Q Consensus 330 ~-sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 407 (453)
. .|+|.++-|. + ..+++.+++.|.|++.-. .+ +.++..+...|+|.+.+++
T Consensus 87 ~g~d~V~~~~g~-----p--------~~~i~~l~~~g~~v~~~v-----------~~---~~~a~~~~~~GaD~i~v~g 138 (332)
T 2z6i_A 87 EGVKVVTTGAGN-----P--------SKYMERFHEAGIIVIPVV-----------PS---VALAKRMEKIGADAVIAEG 138 (332)
T ss_dssp TTCSEEEECSSC-----G--------GGTHHHHHHTTCEEEEEE-----------SS---HHHHHHHHHTTCSCEEEEC
T ss_pred CCCCEEEECCCC-----h--------HHHHHHHHHcCCeEEEEe-----------CC---HHHHHHHHHcCCCEEEEEC
Confidence 3 7999987542 2 235666777899988631 12 2234466778999999964
No 249
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=45.98 E-value=1.5e+02 Score=28.77 Aligned_cols=97 Identities=11% Similarity=0.088 Sum_probs=58.7
Q ss_pred HHHHhhhhcCCcEEEec------cccCHHHHHH-HHHHHHhcCCCceEEEEe---cChhhhccHHHHHhh-c-CEEEEeC
Q 012943 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHE-LKDYLKSCNADIHVIVKI---ESADSIPNLHSIISA-S-DGAMVAR 338 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lS------fV~sa~dv~~-v~~~L~~~~~~i~IIakI---ET~~gv~NldeI~~~-s-DgImIgR 338 (453)
+.+++.++.|+|+|.+. +.-+.++-.+ ++..++..+.+++||+-+ -|.++++......+. . |++|+-+
T Consensus 32 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga~davlv~~ 111 (311)
T 3h5d_A 32 ALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGLAIV 111 (311)
T ss_dssp HHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSCCCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcCCCcEEEEcC
Confidence 55577789999998762 2223333333 444455567789999977 356777766666654 4 9999875
Q ss_pred CCccccCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 012943 339 GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (453)
Q Consensus 339 GDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~a 371 (453)
-...- ..-..+.+..-..|.+.+.|+++.
T Consensus 112 P~y~~----~s~~~l~~~f~~va~a~~lPiilY 140 (311)
T 3h5d_A 112 PYYNK----PSQEGMYQHFKAIADASDLPIIIY 140 (311)
T ss_dssp CCSSC----CCHHHHHHHHHHHHHSCSSCEEEE
T ss_pred CCCCC----CCHHHHHHHHHHHHHhCCCCEEEE
Confidence 43321 111223334444455568888876
No 250
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=45.95 E-value=15 Score=30.55 Aligned_cols=62 Identities=6% Similarity=0.074 Sum_probs=46.6
Q ss_pred HHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhhcCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEE
Q 012943 294 VVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIV 370 (453)
Q Consensus 294 dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~ 370 (453)
-+..++++.++.|-++.+.| .+...+++.+...|.+++| +.+.+..+++-+.|...|+||.+
T Consensus 22 lv~km~~~a~~~gi~v~i~a-----~~~~~~~~~~~~~DvvLLg----------PQV~y~~~~ik~~~~~~~ipV~v 83 (108)
T 3nbm_A 22 LANAINEGANLTEVRVIANS-----GAYGAHYDIMGVYDLIILA----------PQVRSYYREMKVDAERLGIQIVA 83 (108)
T ss_dssp HHHHHHHHHHHHTCSEEEEE-----EETTSCTTTGGGCSEEEEC----------GGGGGGHHHHHHHHTTTTCEEEE
T ss_pred HHHHHHHHHHHCCCceEEEE-----cchHHHHhhccCCCEEEEC----------hHHHHHHHHHHHHhhhcCCcEEE
Confidence 45567777777776766666 2333456666778999998 57888888898889999999887
No 251
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=45.80 E-value=1.9e+02 Score=27.58 Aligned_cols=130 Identities=15% Similarity=0.179 Sum_probs=69.5
Q ss_pred hhhhcCCcEEEeccccCHHHHHHHHHHHHhc---C-CCceEEE--EecChh--hh--------------ccHHHHHhh--
Q 012943 275 FGVDNQVDFYAVSFVKDAKVVHELKDYLKSC---N-ADIHVIV--KIESAD--SI--------------PNLHSIISA-- 330 (453)
Q Consensus 275 ~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~---~-~~i~IIa--kIET~~--gv--------------~NldeI~~~-- 330 (453)
.+.+.|+|++.+.-.-..+-++.+.+.+.+. + ....+++ .+-+.. .+ .++...+..
T Consensus 78 ~~~~~gad~vTVh~~~G~~~~~aa~~~~~~~~~~g~~~~~li~Vt~lTS~~~~~l~~~~g~~~~~~e~v~~~A~~a~~~G 157 (259)
T 3tfx_A 78 ALAKLGITFTTVHALGGSQMIKSAKDGLIAGTPAGHSVPKLLAVTELTSISDDVLRNEQNCRLPMAEQVLSLAKMAKHSG 157 (259)
T ss_dssp HHHTTTCSEEEEEGGGCHHHHHHHHHHHHHHSCTTSCCCEEEEECSCTTCCHHHHHHTSCBSSCHHHHHHHHHHHHHHTT
T ss_pred HHHhcCCCEEEEcCCCCHHHHHHHHHHHHHhcccCCCCceEEEEEEeCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhC
Confidence 3457899999886544555566666666542 2 2344554 333321 11 122222222
Q ss_pred cCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHH------HHHHHHhCccEEE
Q 012943 331 SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSD------IAIAVREGADAVM 404 (453)
Q Consensus 331 sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~D------v~nav~~G~D~vm 404 (453)
.||++.. ..++..+.+ ..|.-.++-| -.-+|.-+...| ...++..|+|.++
T Consensus 158 ~dGvV~s---------~~e~~~ir~-------~~~~~f~~vt-------PGIr~~g~~~gDQ~Rv~T~~~a~~aGad~iV 214 (259)
T 3tfx_A 158 ADGVICS---------PLEVKKLHE-------NIGDDFLYVT-------PGIRPAGNAKDDQSRVATPKMAKEWGSSAIV 214 (259)
T ss_dssp CCEEECC---------GGGHHHHHH-------HHCSSSEEEE-------CCCCCC-----------CHHHHHHTTCSEEE
T ss_pred CCEEEEC---------HHHHHHHHh-------hcCCccEEEc-------CCcCCCCCCcCCccccCCHHHHHHcCCCEEE
Confidence 4677653 223333322 1233322222 233555444455 6678999999999
Q ss_pred ecCcccCCCCHHHHHHHHHHHHH
Q 012943 405 LSGETAHGKFPLKAVKVMHTVAL 427 (453)
Q Consensus 405 Ls~ETA~G~yP~eaV~~m~~I~~ 427 (453)
...-.....-|.++++.+++.+.
T Consensus 215 vGr~I~~a~dp~~a~~~i~~~~~ 237 (259)
T 3tfx_A 215 VGRPITLASDPKAAYEAIKKEFN 237 (259)
T ss_dssp ECHHHHTSSSHHHHHHHHHHHHT
T ss_pred EChHHhCCCCHHHHHHHHHHHHH
Confidence 87777777899999888776543
No 252
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=45.47 E-value=26 Score=36.22 Aligned_cols=48 Identities=23% Similarity=0.434 Sum_probs=38.4
Q ss_pred EEEecCCCCCCHHHHHHHHHhCCcEEEeecCCCChHHHHHHHHHHHHH
Q 012943 103 IVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEY 150 (453)
Q Consensus 103 Ii~TiGPss~s~e~i~~Li~aGmnvaRiNfSHg~~e~~~~~I~~iR~a 150 (453)
+.+-+|+.....+.++.|+++|++++=++++||......+.++.+|+.
T Consensus 228 vga~ig~~~~~~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~ 275 (494)
T 1vrd_A 228 VGAAVGTSPETMERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKAD 275 (494)
T ss_dssp CEEEECSSTTHHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHH
T ss_pred cccccCcCHhHHHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHH
Confidence 444567666668899999999999999999999887777777777754
No 253
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3
Probab=45.08 E-value=47 Score=32.70 Aligned_cols=57 Identities=19% Similarity=0.333 Sum_probs=35.9
Q ss_pred CCCCCHHHHHHHHHhCCcEEEeecCCCCh---------HHHHHHHHHHHHHHhhcCCCcEEEEeecCCC
Q 012943 109 PSTSSREMIWKLAEEGMNVARLNMSHGDH---------ASHQKTIDLVKEYNSQFEDKAVAIMLDTKGP 168 (453)
Q Consensus 109 Pss~s~e~i~~Li~aGmnvaRiNfSHg~~---------e~~~~~I~~iR~a~~~~~~~~iaIllDLkGP 168 (453)
+.....+.|+.|-+.|+|++||-++.... +.+.+.++.+=+...+ +-+.+++|+-..
T Consensus 59 ~~~~~~~di~~i~~~G~n~vRipv~w~~~~~~~~~~~~~~~l~~l~~~v~~a~~---~Gi~vild~H~~ 124 (380)
T 1edg_A 59 GIKTTKQMIDAIKQKGFNTVRIPVSWHPHVSGSDYKISDVWMNRVQEVVNYCID---NKMYVILNTHHD 124 (380)
T ss_dssp CSCCCHHHHHHHHHHTCCEEEECCCCGGGEETTTTEECHHHHHHHHHHHHHHHT---TTCEEEEECCSC
T ss_pred CCcccHHHHHHHHHcCCCEEEecccHHhhcCCCCCcCCHHHHHHHHHHHHHHHH---CCCEEEEeCCCc
Confidence 33456889999999999999998875421 2222222222233333 447889998754
No 254
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=45.05 E-value=71 Score=31.74 Aligned_cols=96 Identities=15% Similarity=0.029 Sum_probs=57.0
Q ss_pred HHHHhhhhcCCcEEEe------ccccCHHHHHHHHHHHHhcCCCceEEEEec---ChhhhccHHHHHhh-cCEEEEeCCC
Q 012943 271 EDIKFGVDNQVDFYAV------SFVKDAKVVHELKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARGD 340 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~l------SfV~sa~dv~~v~~~L~~~~~~i~IIakIE---T~~gv~NldeI~~~-sDgImIgRGD 340 (453)
+.+++.++.|+|+|.+ ++.-+.++-.++-+. ..+.+++||+-+= |.++++......+. +|++|+-+-.
T Consensus 51 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~--~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~ 128 (344)
T 2hmc_A 51 RKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVER--LVKAGIPVIVGTGAVNTASAVAHAVHAQKVGAKGLMVIPRV 128 (344)
T ss_dssp HHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHH--HHHTTCCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCC
T ss_pred HHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHH--HhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCc
Confidence 4457778999999876 234455555554444 3445788999874 46667666655544 8999996544
Q ss_pred ccccCCCCCHHHHHHHHHHHHH-HcCCCEEEE
Q 012943 341 LGAELPIEDVPLLQEDIIRRCR-SMQKPVIVA 371 (453)
Q Consensus 341 Lg~elg~e~v~~aqk~Ii~~c~-~aGkpvi~a 371 (453)
+.-...-+.+...-+. .|. +.+.|+++.
T Consensus 129 y~~~~s~~~l~~~f~~---IA~aa~~lPiilY 157 (344)
T 2hmc_A 129 LSRGSVIAAQKAHFKA---ILSAAPEIPAVIY 157 (344)
T ss_dssp SSSTTCHHHHHHHHHH---HHHHSTTSCEEEE
T ss_pred cCCCCCHHHHHHHHHH---HHhhCCCCcEEEE
Confidence 3220111223323333 355 568898876
No 255
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=44.94 E-value=1.3e+02 Score=28.81 Aligned_cols=90 Identities=19% Similarity=0.202 Sum_probs=49.4
Q ss_pred cCEEEEeC-CCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHH-HHHHHHHHHhCccEEEecCc
Q 012943 331 SDGAMVAR-GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGADAVMLSGE 408 (453)
Q Consensus 331 sDgImIgR-GDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~D~vmLs~E 408 (453)
+||+++.- .-=+..+..++-..+.+.+++.++ -..||+.- .+..+-.| +.-.-.+-..|+|++|+..=
T Consensus 42 v~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaG---------vg~~~t~~ai~la~~a~~~Gadavlv~~P 111 (297)
T 3flu_A 42 TDGIVAVGTTGESATLSVEEHTAVIEAVVKHVA-KRVPVIAG---------TGANNTVEAIALSQAAEKAGADYTLSVVP 111 (297)
T ss_dssp CCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEE---------CCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCEEEeCccccCcccCCHHHHHHHHHHHHHHhC-CCCcEEEe---------CCCcCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 78999841 111112222222223333333332 23677764 34444445 55556777789999998632
Q ss_pred ccCCCCHHHHHHHHHHHHHHHh
Q 012943 409 TAHGKFPLKAVKVMHTVALRTE 430 (453)
Q Consensus 409 TA~G~yP~eaV~~m~~I~~~aE 430 (453)
--...-+-+.++..+.|+..+.
T Consensus 112 ~y~~~~~~~l~~~f~~va~a~~ 133 (297)
T 3flu_A 112 YYNKPSQEGIYQHFKTIAEATS 133 (297)
T ss_dssp CSSCCCHHHHHHHHHHHHHHCC
T ss_pred CCCCCCHHHHHHHHHHHHHhCC
Confidence 2222335678889999988764
No 256
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=44.78 E-value=74 Score=30.45 Aligned_cols=116 Identities=14% Similarity=0.161 Sum_probs=61.1
Q ss_pred HHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhhcCEEEEeCCCccccCCCC-CHH
Q 012943 273 IKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIE-DVP 351 (453)
Q Consensus 273 I~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~sDgImIgRGDLg~elg~e-~v~ 351 (453)
++.+.+.|+|++.++=.- .+++..+.+.+.+.+-. .+..+--....+.+++|++.+.|+...-.=.| -.|.. .+.
T Consensus 112 ~~~~~~aG~dGviv~Dl~-~ee~~~~~~~~~~~gl~--~i~liap~s~~eri~~ia~~~~gfiy~vs~~G-~TG~~~~~~ 187 (271)
T 1ujp_A 112 FGLFKQAGATGVILPDLP-PDEDPGLVRLAQEIGLE--TVFLLAPTSTDARIATVVRHATGFVYAVSVTG-VTGMRERLP 187 (271)
T ss_dssp HHHHHHHTCCEEECTTCC-GGGCHHHHHHHHHHTCE--EECEECTTCCHHHHHHHHTTCCSCEEEECC------------
T ss_pred HHHHHHcCCCEEEecCCC-HHHHHHHHHHHHHcCCc--eEEEeCCCCCHHHHHHHHHhCCCCEEEEecCc-ccCCCCCCC
Confidence 444567799988877443 25666777777766532 33334333445678888888655432210000 01211 111
Q ss_pred HHHHHHHHHHHHc-CCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEec
Q 012943 352 LLQEDIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (453)
Q Consensus 352 ~aqk~Ii~~c~~a-Gkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (453)
.-....++..+++ +.|+++. .+.-|.+.+. .+ .|+|+++..
T Consensus 188 ~~~~~~v~~vr~~~~~Pv~vG---------fGI~t~e~a~---~~--~~ADgVIVG 229 (271)
T 1ujp_A 188 EEVKDLVRRIKARTALPVAVG---------FGVSGKATAA---QA--AVADGVVVG 229 (271)
T ss_dssp -CCHHHHHHHHTTCCSCEEEE---------SCCCSHHHHH---HH--TTSSEEEEC
T ss_pred ccHHHHHHHHHhhcCCCEEEE---------cCCCCHHHHH---Hh--cCCCEEEEC
Confidence 1113444555554 7898884 4444444333 43 789999974
No 257
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=44.78 E-value=1.4e+02 Score=29.20 Aligned_cols=55 Identities=13% Similarity=0.084 Sum_probs=32.8
Q ss_pred CCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccCCC---CHHHHHHHHHHHHHHHhc
Q 012943 365 QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGK---FPLKAVKVMHTVALRTES 431 (453)
Q Consensus 365 Gkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~---yP~eaV~~m~~I~~~aE~ 431 (453)
+.|+|.. .+.-+ ..|+..++..|+|+|++..--..+. -|....+.+..+..+.+.
T Consensus 251 ~ipvia~---------GGI~~---~~d~~k~l~~GAd~V~iG~~~l~~~~~~g~~~~~~~~~~~~~~l~~ 308 (349)
T 1p0k_A 251 ASTMIAS---------GGLQD---ALDVAKAIALGASCTGMAGHFLKALTDSGEEGLLEEIQLILEELKL 308 (349)
T ss_dssp TSEEEEE---------SSCCS---HHHHHHHHHTTCSEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEE---------CCCCC---HHHHHHHHHcCCCEEEEcHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Confidence 6777763 44444 4578888999999999864322210 122334556666666554
No 258
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=44.67 E-value=89 Score=24.18 Aligned_cols=72 Identities=14% Similarity=0.143 Sum_probs=39.1
Q ss_pred CceeecCCCEEEEEeec-CCCCccEEEe-cccccccccccCC-EEEEeCCeeEEEEEEEe---CCeEEEEEeeC-cEecc
Q 012943 177 QPIILKEGQEFNFTIKR-GVSTEDTVSV-NYDDFVNDVEVGD-ILLVDGGMMSLAVKSKT---KDLVKCIVVDG-GELKS 249 (453)
Q Consensus 177 ~~i~L~~G~~v~lt~~~-~~~~~~~I~v-~~~~l~~~vk~Gd-~IlIDDG~I~L~V~ev~---~~~v~~~V~ng-G~L~s 249 (453)
..+.+.+|+.++|...- +.-.....|. |...+... .-+. .+.-+++.-.|.+..+. .+...|.+.|. |....
T Consensus 13 ~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~-~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~ 91 (100)
T 3knb_A 13 SDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQ-EQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGNEFGSDSA 91 (100)
T ss_dssp SEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTT-GGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEETTEEEEE
T ss_pred CcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeee-ccceeeeecccceEEEEEcCCCccCCEEEEEEEEECCCEEEE
Confidence 46789999999998752 1112222332 22222111 1111 23445566677776653 34689999985 44433
No 259
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=44.63 E-value=1.1e+02 Score=27.95 Aligned_cols=129 Identities=12% Similarity=0.104 Sum_probs=64.3
Q ss_pred HHHHHhhhhcCCcEEEecc--ccCHHHHHHHHHHHHhcCCCceEEE-----EecChhhh----ccHHHHH----hh-cCE
Q 012943 270 WEDIKFGVDNQVDFYAVSF--VKDAKVVHELKDYLKSCNADIHVIV-----KIESADSI----PNLHSII----SA-SDG 333 (453)
Q Consensus 270 ~~DI~~a~~~gvd~I~lSf--V~sa~dv~~v~~~L~~~~~~i~IIa-----kIET~~gv----~NldeI~----~~-sDg 333 (453)
.+++..+++.|+|+|.+.- ..+++. +.++ ...+..+.+-+ ++++.... .+..|.+ +. ++.
T Consensus 85 ~~~~~~~~~~Gad~V~lg~~~l~~p~~---~~~~-~~~g~~i~~~~d~~~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~ 160 (241)
T 1qo2_A 85 LDYAEKLRKLGYRRQIVSSKVLEDPSF---LKSL-REIDVEPVFSLDTRGGRVAFKGWLAEEEIDPVSLLKRLKEYGLEE 160 (241)
T ss_dssp HHHHHHHHHTTCCEEEECHHHHHCTTH---HHHH-HTTTCEEEEEEEEETTEECCTTCSSCSCCCHHHHHHHHHTTTCCE
T ss_pred HHHHHHHHHCCCCEEEECchHhhChHH---HHHH-HHcCCcEEEEEEecCCEEEECCceecCCCCHHHHHHHHHhCCCCE
Confidence 3456666778999988752 123332 3344 44443332222 33432111 1333433 22 566
Q ss_pred EEEeCCC-ccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHh-----C-ccEEEec
Q 012943 334 AMVARGD-LGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVRE-----G-ADAVMLS 406 (453)
Q Consensus 334 ImIgRGD-Lg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~-----G-~D~vmLs 406 (453)
|++-.-+ =+...|+ .+ ...+++ +....+|++.. .+.-+..+ +..+... | +|++|..
T Consensus 161 i~~t~~~~~g~~~g~-~~-~~i~~l---~~~~~iPvia~---------GGI~~~~d---~~~~~~~~~~~~G~adgv~vg 223 (241)
T 1qo2_A 161 IVHTEIEKDGTLQEH-DF-SLTKKI---AIEAEVKVLAA---------GGISSENS---LKTAQKVHTETNGLLKGVIVG 223 (241)
T ss_dssp EEEEETTHHHHTCCC-CH-HHHHHH---HHHHTCEEEEE---------SSCCSHHH---HHHHHHHHHHTTTSEEEEEEC
T ss_pred EEEEeecccccCCcC-CH-HHHHHH---HHhcCCcEEEE---------CCCCCHHH---HHHHHhcccccCCeEeEEEee
Confidence 7763211 0111232 22 222333 33348898874 55555544 4444555 9 9999987
Q ss_pred CcccCCCCHHHHH
Q 012943 407 GETAHGKFPLKAV 419 (453)
Q Consensus 407 ~ETA~G~yP~eaV 419 (453)
.---.|+++++.+
T Consensus 224 sal~~~~~~~~~~ 236 (241)
T 1qo2_A 224 RAFLEGILTVEVM 236 (241)
T ss_dssp HHHHTTSSCHHHH
T ss_pred HHHHcCCCCHHHH
Confidence 6555677776543
No 260
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=44.44 E-value=1.2e+02 Score=28.99 Aligned_cols=115 Identities=16% Similarity=0.205 Sum_probs=69.1
Q ss_pred HHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhhcCEEE--EeCCCccccCCCC-C
Q 012943 273 IKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAM--VARGDLGAELPIE-D 349 (453)
Q Consensus 273 I~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~sDgIm--IgRGDLg~elg~e-~ 349 (453)
++.+.+.|+|++.+|=. -.++...+++.+.+.|-+ .|..+=.....+.+.+|++.++|++ +.+- | -.|.. .
T Consensus 109 ~~~~~~aGvdG~IipDL-P~eE~~~~~~~~~~~Gl~--~I~lvaP~t~~eRi~~ia~~a~gFiY~Vs~~--G-vTG~~~~ 182 (252)
T 3tha_A 109 VKKAKSLGICALIVPEL-SFEESDDLIKECERYNIA--LITLVSVTTPKERVKKLVKHAKGFIYLLASI--G-ITGTKSV 182 (252)
T ss_dssp HHHHHHTTEEEEECTTC-CGGGCHHHHHHHHHTTCE--ECEEEETTSCHHHHHHHHTTCCSCEEEECCS--C-SSSCSHH
T ss_pred HHHHHHcCCCEEEeCCC-CHHHHHHHHHHHHHcCCe--EEEEeCCCCcHHHHHHHHHhCCCeEEEEecC--C-CCCcccC
Confidence 35556889999998865 345667777888776644 3333322223688899998876553 3210 0 12322 2
Q ss_pred HHHHHHHHHHHHHHc-CCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEec
Q 012943 350 VPLLQEDIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (453)
Q Consensus 350 v~~aqk~Ii~~c~~a-Gkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (453)
+.......++..+++ ++|+++. .+.-+...+. .+..++|+++..
T Consensus 183 ~~~~~~~~v~~vr~~~~~Pv~vG---------fGIst~e~a~----~~~~~ADGVIVG 227 (252)
T 3tha_A 183 EEAILQDKVKEIRSFTNLPIFVG---------FGIQNNQDVK----RMRKVADGVIVG 227 (252)
T ss_dssp HHHHHHHHHHHHHTTCCSCEEEE---------SSCCSHHHHH----HHTTTSSEEEEC
T ss_pred CCHHHHHHHHHHHHhcCCcEEEE---------cCcCCHHHHH----HHHhcCCEEEEC
Confidence 334456677777776 6788884 4455544433 334579999874
No 261
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=43.90 E-value=23 Score=32.74 Aligned_cols=127 Identities=17% Similarity=0.262 Sum_probs=74.9
Q ss_pred hhHHHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHh----h--cCEEEEeCCCc
Q 012943 268 KDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIIS----A--SDGAMVARGDL 341 (453)
Q Consensus 268 kD~~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~----~--sDgImIgRGDL 341 (453)
++.++++.+++..++.|++.+. +-..+.++-+.+.+.++ .++.-++..+|+.+=+.=+. . .|||+=-+.-+
T Consensus 17 r~~~~l~~al~s~~~~ifll~g-~i~~l~~~v~~lk~~~K--~v~Vh~Dli~Gls~d~~ai~fL~~~~~pdGIIsTk~~~ 93 (192)
T 3kts_A 17 HNQKDMEKILELDLTYMVMLET-HVAQLKALVKYAQAGGK--KVLLHADLVNGLKNDDYAIDFLCTEICPDGIISTRGNA 93 (192)
T ss_dssp SSSHHHHHHTTSSCCEEEECSE-ETTTHHHHHHHHHHTTC--EEEEEGGGEETCCCSHHHHHHHHHTTCCSEEEESCHHH
T ss_pred cCHHHHHHHHcCCCCEEEEecC-cHHHHHHHHHHHHHcCC--eEEEecCchhccCCcHHHHHHHHhCCCCCEEEeCcHHH
Confidence 4678888888888999998875 44556666666766665 45557777777754222111 1 56766443211
Q ss_pred ---cccCCCC-----------------------------CHHHHH-HHHHHHHHHcCCCEEEEechhhhhccCCCCchHH
Q 012943 342 ---GAELPIE-----------------------------DVPLLQ-EDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE 388 (453)
Q Consensus 342 ---g~elg~e-----------------------------~v~~aq-k~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAE 388 (453)
+-++|++ -+|-.. +.|-+.++..+.|+|.. ...-+
T Consensus 94 i~~Ak~~gL~tIqR~FliDS~al~~~~~~i~~~~PD~iEiLPGi~p~iI~~i~~~~~~PiIaG---------GlI~~--- 161 (192)
T 3kts_A 94 IMKAKQHKMLAIQRLFMIDSSAYNKGVALIQKVQPDCIELLPGIIPEQVQKMTQKLHIPVIAG---------GLIET--- 161 (192)
T ss_dssp HHHHHHTTCEEEEEEECCSHHHHHHHHHHHHHHCCSEEEEECTTCHHHHHHHHHHHCCCEEEE---------SSCCS---
T ss_pred HHHHHHCCCeEEEEEEEEEcchHHHHHHHHhhcCCCEEEECCchhHHHHHHHHHhcCCCEEEE---------CCcCC---
Confidence 1122220 011111 33333355668887763 33333
Q ss_pred HHHHHHHHHhCccEEEecCcc
Q 012943 389 VSDIAIAVREGADAVMLSGET 409 (453)
Q Consensus 389 v~Dv~nav~~G~D~vmLs~ET 409 (453)
-.|+.+++..|||+|.-|...
T Consensus 162 ~edv~~al~aGA~aVsTs~~~ 182 (192)
T 3kts_A 162 SEQVNQVIASGAIAVTTSNKH 182 (192)
T ss_dssp HHHHHHHHTTTEEEEEECCGG
T ss_pred HHHHHHHHHcCCeEEEeCCHH
Confidence 457889999999999987654
No 262
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=43.73 E-value=1.4e+02 Score=28.82 Aligned_cols=88 Identities=15% Similarity=0.152 Sum_probs=56.2
Q ss_pred HHHHHHhcCCCceEEEEecChhhhccHHHHHhh-cCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhh
Q 012943 298 LKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLE 376 (453)
Q Consensus 298 v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~-sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLe 376 (453)
+++.|......+.+++.+.+++-++.+ ... .|.+++...|-. .+...++. .+.++...|+++++=++
T Consensus 30 ~k~~l~~G~~~~gl~~~~~~p~~~e~a---~~~GaD~v~lDlEh~~-----~~~~~~~~-~l~a~~~~~~~~~VRv~--- 97 (287)
T 2v5j_A 30 FKAALKAGRPQIGLWLGLSSSYSAELL---AGAGFDWLLIDGEHAP-----NNVQTVLT-QLQAIAPYPSQPVVRPS--- 97 (287)
T ss_dssp HHHHHHTTCCEEEEEECSCCHHHHHHH---HTSCCSEEEEESSSSS-----CCHHHHHH-HHHHHTTSSSEEEEECS---
T ss_pred HHHHHHCCCcEEEEEEECCCHHHHHHH---HhCCCCEEEEeCCCcc-----chHHHHHH-HHHHHHhcCCCEEEEEC---
Confidence 566665422367888989888766332 222 799999888752 22333332 34555667888887432
Q ss_pred hhccCCCCchHHHHHHHHHHHhCccEEEec
Q 012943 377 SMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (453)
Q Consensus 377 SM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (453)
.... .|+..++..|+|+||+.
T Consensus 98 ------~~d~---~di~~~ld~ga~~ImlP 118 (287)
T 2v5j_A 98 ------WNDP---VQIKQLLDVGTQTLLVP 118 (287)
T ss_dssp ------SSCH---HHHHHHHHTTCCEEEES
T ss_pred ------CCCH---HHHHHHHhCCCCEEEeC
Confidence 2332 27778888899999996
No 263
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=43.64 E-value=1.3e+02 Score=28.67 Aligned_cols=97 Identities=13% Similarity=0.077 Sum_probs=54.7
Q ss_pred HHHHhhhhcCCcEEEe------ccccCHHHHHH-HHHHHHhcCCCceEEEEec---ChhhhccHHHHHhh-cCEEEEeCC
Q 012943 271 EDIKFGVDNQVDFYAV------SFVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~l------SfV~sa~dv~~-v~~~L~~~~~~i~IIakIE---T~~gv~NldeI~~~-sDgImIgRG 339 (453)
+.+++.++.|+|+|.+ ++.-+.++-.+ ++...+..+.+++||+-+= |.++++......+. +|++|+-+-
T Consensus 26 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P 105 (292)
T 2ojp_A 26 KLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTP 105 (292)
T ss_dssp HHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTTSSCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHhcCCCEEEECCC
Confidence 4557778999999876 22334444433 3444455567889999874 35555555443333 799998654
Q ss_pred CccccCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 012943 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (453)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~a 371 (453)
.+.-- +-+.+...-+ ..|.+.+.|+++.
T Consensus 106 ~y~~~-s~~~l~~~f~---~ia~a~~lPiilY 133 (292)
T 2ojp_A 106 YYNRP-SQEGLYQHFK---AIAEHTDLPQILY 133 (292)
T ss_dssp CSSCC-CHHHHHHHHH---HHHTTCSSCEEEE
T ss_pred CCCCC-CHHHHHHHHH---HHHHhcCCCEEEE
Confidence 33210 1122222223 3345557887765
No 264
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=43.51 E-value=63 Score=32.40 Aligned_cols=98 Identities=12% Similarity=0.058 Sum_probs=53.2
Q ss_pred CCCCHhhHHHH-HhhhhcCCcEEEeccccC-----------------------HHHHHHHHHHHHhcCCCceEEE--Eec
Q 012943 263 PSITDKDWEDI-KFGVDNQVDFYAVSFVKD-----------------------AKVVHELKDYLKSCNADIHVIV--KIE 316 (453)
Q Consensus 263 p~ltekD~~DI-~~a~~~gvd~I~lSfV~s-----------------------a~dv~~v~~~L~~~~~~i~IIa--kIE 316 (453)
|.+++.|..++ +.+.+.|+|+|.++-.-. +..++.+++.-+..+.+++||+ -|.
T Consensus 229 p~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~ 308 (367)
T 3zwt_A 229 PDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVS 308 (367)
T ss_dssp SCCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCC
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCC
Confidence 34566676555 455789999998863210 1122334443334445788886 366
Q ss_pred ChhhhccHHHHHh-hcCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcC
Q 012943 317 SADSIPNLHSIIS-ASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQ 365 (453)
Q Consensus 317 T~~gv~NldeI~~-~sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aG 365 (453)
|.+-. .+.+. -+|++++||+=|-- |..-+..+.+.+.....+.|
T Consensus 309 s~~da---~~~l~~GAd~V~vgra~l~~--gP~~~~~i~~~l~~~m~~~G 353 (367)
T 3zwt_A 309 SGQDA---LEKIRAGASLVQLYTALTFW--GPPVVGKVKRELEALLKEQG 353 (367)
T ss_dssp SHHHH---HHHHHHTCSEEEESHHHHHH--CTHHHHHHHHHHHHHHHHTT
T ss_pred CHHHH---HHHHHcCCCEEEECHHHHhc--CcHHHHHHHHHHHHHHHHcC
Confidence 55433 22222 38999999976421 22223344444444444444
No 265
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=42.98 E-value=71 Score=29.74 Aligned_cols=54 Identities=11% Similarity=0.084 Sum_probs=41.4
Q ss_pred HHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccCCCCHHHHHHHHHHHHH
Q 012943 354 QEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVAL 427 (453)
Q Consensus 354 qk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~ 427 (453)
-...++.|+++|++|.+-|- . +..+...++..|+|+++- .||-.+.++++++-.
T Consensus 193 ~~~~v~~~~~~G~~V~~WTv--------n-----~~~~~~~l~~~GVDgIiT-------D~P~~~~~~~~~~~~ 246 (250)
T 3ks6_A 193 DAGLMAQVQAAGLDFGCWAA--------H-----TPSQITKALDLGVKVFTT-------DRPTLAIALRTEHRM 246 (250)
T ss_dssp CHHHHHHHHHTTCEEEEECC--------C-----SHHHHHHHHHHTCSEEEE-------SCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCEEEEEeC--------C-----CHHHHHHHHHcCCCEEEc-------CCHHHHHHHHHHhhc
Confidence 46789999999999988651 1 123456788899999986 589999888877643
No 266
>3l55_A B-1,4-endoglucanase/cellulase; putative beta-1,4-endoglucanase, glycosyl hydrolase family 5, mixed alpha-beta, TIM barrel; HET: MSE; 1.60A {Prevotella bryantii} PDB: 3vdh_A*
Probab=42.92 E-value=42 Score=33.29 Aligned_cols=58 Identities=16% Similarity=0.336 Sum_probs=36.7
Q ss_pred CCCCCCHHHHHHHHHhCCcEEEeecCCCCh--------HHHHHHHHHHHHHHhhcCCCcEEEEeecCCC
Q 012943 108 GPSTSSREMIWKLAEEGMNVARLNMSHGDH--------ASHQKTIDLVKEYNSQFEDKAVAIMLDTKGP 168 (453)
Q Consensus 108 GPss~s~e~i~~Li~aGmnvaRiNfSHg~~--------e~~~~~I~~iR~a~~~~~~~~iaIllDLkGP 168 (453)
|..--+.+.++.|-+.|+|++||-++.... +...+.++.+=+...+.+ +.+++|+-.-
T Consensus 49 g~~~~t~~di~~ik~~G~N~vRipi~w~~~~~~~g~~d~~~l~~ld~vVd~a~~~G---i~vIldlH~~ 114 (353)
T 3l55_A 49 GQPETTQDMMTFLMQNGFNAVRIPVTWYEHMDAEGNVDEAWMMRVKAIVEYAMNAG---LYAIVNVHHD 114 (353)
T ss_dssp SCCCCCHHHHHHHHHTTEEEEEECCCCGGGBCTTCCBCHHHHHHHHHHHHHHHHHT---CEEEEECCTT
T ss_pred CCCCCCHHHHHHHHHcCCCEEEEcccHHHhcCCCCCcCHHHHHHHHHHHHHHHHCC---CEEEEECCCC
Confidence 333347899999999999999999875321 222233333333333444 7788898653
No 267
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=42.86 E-value=1.5e+02 Score=29.72 Aligned_cols=31 Identities=23% Similarity=0.242 Sum_probs=23.1
Q ss_pred CCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecC
Q 012943 365 QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (453)
Q Consensus 365 Gkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 407 (453)
..|+|.. .+.-+ -.|+..++..|+|+|++..
T Consensus 272 ~ipVia~---------GGI~~---g~Dv~kaLalGA~aV~iGr 302 (352)
T 3sgz_A 272 KIEVYMD---------GGVRT---GTDVLKALALGARCIFLGR 302 (352)
T ss_dssp SSEEEEE---------SSCCS---HHHHHHHHHTTCSEEEESH
T ss_pred CCeEEEE---------CCCCC---HHHHHHHHHcCCCEEEECH
Confidence 5677764 33433 5689999999999999864
No 268
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=42.86 E-value=40 Score=33.85 Aligned_cols=67 Identities=16% Similarity=0.240 Sum_probs=40.9
Q ss_pred HHHHhhhhcCCcEEEecccc------CHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh----cCEEEEeCCC
Q 012943 271 EDIKFGVDNQVDFYAVSFVK------DAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA----SDGAMVARGD 340 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lSfV~------sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~----sDgImIgRGD 340 (453)
++.+.+.+.|+|+|.++--- .+..+..+.+.....+.++.||+- -|+.+-.+++++ +|++++||.=
T Consensus 229 e~A~~a~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~av~~~ipVia~----GGI~~g~Dv~kaLalGA~aV~iGr~~ 304 (352)
T 3sgz_A 229 EDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMD----GGVRTGTDVLKALALGARCIFLGRPI 304 (352)
T ss_dssp HHHHHHHHTTCSEEEECCGGGTSSCSSCCHHHHHHHHHHHHTTSSEEEEE----SSCCSHHHHHHHHHTTCSEEEESHHH
T ss_pred HHHHHHHHcCCCEEEEeCCCCCccCCCccHHHHHHHHHHHhCCCCeEEEE----CCCCCHHHHHHHHHcCCCEEEECHHH
Confidence 45666778999999985321 122344444444444557888872 344444555544 8999999864
Q ss_pred c
Q 012943 341 L 341 (453)
Q Consensus 341 L 341 (453)
|
T Consensus 305 l 305 (352)
T 3sgz_A 305 L 305 (352)
T ss_dssp H
T ss_pred H
Confidence 4
No 269
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=42.74 E-value=1.2e+02 Score=29.38 Aligned_cols=90 Identities=17% Similarity=0.162 Sum_probs=49.5
Q ss_pred cCEEEEeC-CCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHH-HHHHHHHHHhCccEEEecCc
Q 012943 331 SDGAMVAR-GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGADAVMLSGE 408 (453)
Q Consensus 331 sDgImIgR-GDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~D~vmLs~E 408 (453)
+||+++.- .-=+..+..++-..+.+.+++.++ -..||+.- .+..+-+| +.-.-.+-..|+|++|+..=
T Consensus 58 v~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~-grvpViaG---------vg~~st~eai~la~~A~~~Gadavlv~~P 127 (314)
T 3qze_A 58 TNAIVAVGTTGESATLDVEEHIQVIRRVVDQVK-GRIPVIAG---------TGANSTREAVALTEAAKSGGADACLLVTP 127 (314)
T ss_dssp CCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHT-TSSCEEEE---------CCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCEEEECccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEe---------CCCcCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 79998841 011112222222333333333332 23677764 33444445 55556677789999998632
Q ss_pred ccCCCCHHHHHHHHHHHHHHHh
Q 012943 409 TAHGKFPLKAVKVMHTVALRTE 430 (453)
Q Consensus 409 TA~G~yP~eaV~~m~~I~~~aE 430 (453)
--...-+-+.++..+.|+..+.
T Consensus 128 ~y~~~s~~~l~~~f~~va~a~~ 149 (314)
T 3qze_A 128 YYNKPTQEGMYQHFRHIAEAVA 149 (314)
T ss_dssp CSSCCCHHHHHHHHHHHHHHSC
T ss_pred CCCCCCHHHHHHHHHHHHHhcC
Confidence 2222335678899999988774
No 270
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=42.56 E-value=40 Score=33.79 Aligned_cols=65 Identities=14% Similarity=0.138 Sum_probs=39.8
Q ss_pred HHHHhhhhcCCcEEEecccc------CHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh----cCEEEEeCC
Q 012943 271 EDIKFGVDNQVDFYAVSFVK------DAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA----SDGAMVARG 339 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lSfV~------sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~----sDgImIgRG 339 (453)
++.+.+.+.|+|+|.+|--- ....+..+.+..+..+.++.||+ --|+.+-.+++++ +|+++|||.
T Consensus 241 e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v~~~ipVia----~GGI~~g~D~~kalalGAd~V~iGr~ 315 (368)
T 2nli_A 241 EDADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAERVNKRVPIVF----DSGVRRGEHVAKALASGADVVALGRP 315 (368)
T ss_dssp HHHHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHHTTSSCEEE----CSSCCSHHHHHHHHHTTCSEEEECHH
T ss_pred HHHHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHhCCCCeEEE----ECCCCCHHHHHHHHHcCCCEEEECHH
Confidence 55667778999999996310 12233333333333344678886 2455555555554 899999983
No 271
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=41.96 E-value=1e+02 Score=31.14 Aligned_cols=94 Identities=13% Similarity=0.098 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh-cCEEEEeCCCcc--ccCCCCCHHHHHHHHHHHHHHcCCCE
Q 012943 292 AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLG--AELPIEDVPLLQEDIIRRCRSMQKPV 368 (453)
Q Consensus 292 a~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~-sDgImIgRGDLg--~elg~e~v~~aqk~Ii~~c~~aGkpv 368 (453)
.+++..+++.. +.+|++|.= ...+......++ +|+|.+.-. -+ ...+...+ .+..++.++.. ...||
T Consensus 241 ~~~i~~lr~~~-----~~PvivKgv--~~~e~A~~a~~aGad~I~vs~~-ggr~~~~g~~~~-~~l~~v~~av~-~~ipV 310 (392)
T 2nzl_A 241 WEDIKWLRRLT-----SLPIVAKGI--LRGDDAREAVKHGLNGILVSNH-GARQLDGVPATI-DVLPEIVEAVE-GKVEV 310 (392)
T ss_dssp HHHHHHHC--C-----CSCEEEEEE--CCHHHHHHHHHTTCCEEEECCG-GGTSSTTCCCHH-HHHHHHHHHHT-TSSEE
T ss_pred HHHHHHHHHhh-----CCCEEEEec--CCHHHHHHHHHcCCCEEEeCCC-CCCcCCCCcChH-HHHHHHHHHcC-CCCEE
Confidence 45555554432 466777721 112223333333 799998411 11 12233222 22233332221 24777
Q ss_pred EEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecC
Q 012943 369 IVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (453)
Q Consensus 369 i~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 407 (453)
|.. .+.-+ -.|+..++..|+|+||+..
T Consensus 311 ia~---------GGI~~---g~Dv~kalalGAd~V~iGr 337 (392)
T 2nzl_A 311 FLD---------GGVRK---GTDVLKALALGAKAVFVGR 337 (392)
T ss_dssp EEC---------SSCCS---HHHHHHHHHTTCSEEEECH
T ss_pred EEE---------CCCCC---HHHHHHHHHhCCCeeEECH
Confidence 763 33333 5689999999999999864
No 272
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=41.76 E-value=46 Score=33.24 Aligned_cols=65 Identities=18% Similarity=0.290 Sum_probs=39.4
Q ss_pred HHHHhhhhcCCcEEEeccccC------HHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh----cCEEEEeCC
Q 012943 271 EDIKFGVDNQVDFYAVSFVKD------AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA----SDGAMVARG 339 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lSfV~s------a~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~----sDgImIgRG 339 (453)
++++.+.+.|+|+|.++-.-. ..++..+.+.......++.||+- -|+.+-+++.+. +|++++||.
T Consensus 237 e~a~~a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~~~~ipvia~----GGI~~~~D~~k~l~~GAdaV~iGr~ 311 (370)
T 1gox_A 237 EDARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFLD----GGVRRGTDVFKALALGAAGVFIGRP 311 (370)
T ss_dssp HHHHHHHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTTSSCEEEE----SSCCSHHHHHHHHHHTCSEEEECHH
T ss_pred HHHHHHHHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHhCCCCEEEEE----CCCCCHHHHHHHHHcCCCEEeecHH
Confidence 556777899999999963211 12444444444444456788862 344444444443 899999984
No 273
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=41.67 E-value=25 Score=35.94 Aligned_cols=43 Identities=28% Similarity=0.381 Sum_probs=33.8
Q ss_pred EecCCCCCCHHHHHHHHHhCCcEEEeecCCCChHHHHHHHHHHHH
Q 012943 105 CTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKE 149 (453)
Q Consensus 105 ~TiGPss~s~e~i~~Li~aGmnvaRiNfSHg~~e~~~~~I~~iR~ 149 (453)
+.+|+.. .+.++.++++|++++=|+.+||..+.+.+.++.+|+
T Consensus 139 ~~v~~~~--~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik~ 181 (400)
T 3ffs_A 139 AAIGVNE--IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKS 181 (400)
T ss_dssp EEECCC---CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHHT
T ss_pred eecCCCH--HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHHh
Confidence 3455543 789999999999999999999988777677766664
No 274
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=41.45 E-value=2.4e+02 Score=27.64 Aligned_cols=122 Identities=17% Similarity=0.230 Sum_probs=59.8
Q ss_pred HHHHhhhhcCCcEEEecc----------------ccCHHHHHHHHHHHHhcCCCceEEEEecC----hhhhccHHHHHh-
Q 012943 271 EDIKFGVDNQVDFYAVSF----------------VKDAKVVHELKDYLKSCNADIHVIVKIES----ADSIPNLHSIIS- 329 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lSf----------------V~sa~dv~~v~~~L~~~~~~i~IIakIET----~~gv~NldeI~~- 329 (453)
+..+.+.+.|+|+|-+.+ .++++.+.++-+.+.+.- +++|.+||-. ....++..+++.
T Consensus 74 ~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v-~~PV~vKiR~g~~~~~~~~~~~~~a~~ 152 (350)
T 3b0p_A 74 EAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAV-RVPVTVKMRLGLEGKETYRGLAQSVEA 152 (350)
T ss_dssp HHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHC-SSCEEEEEESCBTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHh-CCceEEEEecCcCccccHHHHHHHHHH
Confidence 334556678999987764 223444444444444322 5778888742 111122333332
Q ss_pred ---h-cCEEEEeCCCc--cccCCCC--CHHHHHHHHHHHHH-Hc-CCCEEEEechhhhhccCCCCchHHHHHHHHHHHhC
Q 012943 330 ---A-SDGAMVARGDL--GAELPIE--DVPLLQEDIIRRCR-SM-QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREG 399 (453)
Q Consensus 330 ---~-sDgImIgRGDL--g~elg~e--~v~~aqk~Ii~~c~-~a-Gkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G 399 (453)
. +|+|.+-.+.- +.. |.. ..+...-..+...+ .. +.|||.. ...-|.. |+..++. |
T Consensus 153 l~~aG~d~I~V~~r~~~~g~~-g~~~~~~~~~~~~~i~~ik~~~~~iPVian---------GgI~s~e---da~~~l~-G 218 (350)
T 3b0p_A 153 MAEAGVKVFVVHARSALLALS-TKANREIPPLRHDWVHRLKGDFPQLTFVTN---------GGIRSLE---EALFHLK-R 218 (350)
T ss_dssp HHHTTCCEEEEECSCBC-----------CCCCCHHHHHHHHHHCTTSEEEEE---------SSCCSHH---HHHHHHT-T
T ss_pred HHHcCCCEEEEecCchhcccC-cccccCCCcccHHHHHHHHHhCCCCeEEEE---------CCcCCHH---HHHHHHh-C
Confidence 2 68888864321 110 100 00001112233333 34 7888874 4444543 3445555 9
Q ss_pred ccEEEecC
Q 012943 400 ADAVMLSG 407 (453)
Q Consensus 400 ~D~vmLs~ 407 (453)
+|+||+..
T Consensus 219 aD~V~iGR 226 (350)
T 3b0p_A 219 VDGVMLGR 226 (350)
T ss_dssp SSEEEECH
T ss_pred CCEEEECH
Confidence 99999853
No 275
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=41.28 E-value=1.8e+02 Score=27.93 Aligned_cols=89 Identities=17% Similarity=0.039 Sum_probs=47.9
Q ss_pred cCEEEEeCCCc--cccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHH-HHHHHHHHHhCccEEEecC
Q 012943 331 SDGAMVARGDL--GAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGADAVMLSG 407 (453)
Q Consensus 331 sDgImIgRGDL--g~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~D~vmLs~ 407 (453)
+||+++. |=- +..+..++-..+.+.+++.++ ...|||.- .+..+-.| +.-.-.+-..|+|++|+..
T Consensus 46 v~Gl~v~-GtTGE~~~Ls~eEr~~v~~~~~~~~~-grvpViaG---------vg~~~t~~ai~la~~A~~~Gadavlv~~ 114 (303)
T 2wkj_A 46 IDGLYVG-GSTGEAFVQSLSEREQVLEIVAEEAK-GKIKLIAH---------VGCVSTAESQQLAASAKRYGFDAVSAVT 114 (303)
T ss_dssp CSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TTSEEEEE---------CCCSSHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred CCEEEEC-eeccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEe---------cCCCCHHHHHHHHHHHHhCCCCEEEecC
Confidence 7898884 111 111222222223333333322 24577664 33444445 4445556677999999863
Q ss_pred cccCCCCHHHHHHHHHHHHHHHh
Q 012943 408 ETAHGKFPLKAVKVMHTVALRTE 430 (453)
Q Consensus 408 ETA~G~yP~eaV~~m~~I~~~aE 430 (453)
=--...=+-+.++..+.|+..+.
T Consensus 115 P~y~~~s~~~l~~~f~~va~a~~ 137 (303)
T 2wkj_A 115 PFYYPFSFEEHCDHYRAIIDSAD 137 (303)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCHHHHHHHHHHHHHhCC
Confidence 22222335677888999988776
No 276
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A*
Probab=41.19 E-value=66 Score=31.69 Aligned_cols=56 Identities=16% Similarity=0.188 Sum_probs=33.4
Q ss_pred CCHHHHHHHHHhCCcEEEeecCCCC-----hH--HHHHHHHHHHHHHhhcCCCcEEEEeecCC
Q 012943 112 SSREMIWKLAEEGMNVARLNMSHGD-----HA--SHQKTIDLVKEYNSQFEDKAVAIMLDTKG 167 (453)
Q Consensus 112 ~s~e~i~~Li~aGmnvaRiNfSHg~-----~e--~~~~~I~~iR~a~~~~~~~~iaIllDLkG 167 (453)
.+.+.++.|-+.|+|++||-++... .. .-...++.++++.+.+..+-+.+++|+-.
T Consensus 63 ~~~~di~~i~~~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~~~~vv~~a~~~Gi~vildlH~ 125 (376)
T 3ayr_A 63 TTEDMFKVLIDNQFNVFRIPTTWSGHFGEAPDYKIDEKWLKRVHEVVDYPYKNGAFVILNLHH 125 (376)
T ss_dssp CCHHHHHHHHHTTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEEECCS
T ss_pred CcHHHHHHHHHcCCCEEEEeeEChhhcCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEECCC
Confidence 4688999999999999999887531 00 01122222233222221144788999865
No 277
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=41.05 E-value=1.8e+02 Score=26.49 Aligned_cols=138 Identities=9% Similarity=-0.008 Sum_probs=75.6
Q ss_pred HHHHhhhhcCCcEEEecc---ccCHHHHHHHHHHHHhcCCCceEEE--Ee-cChhhh-ccHHHHHhh-----cCEEEEeC
Q 012943 271 EDIKFGVDNQVDFYAVSF---VKDAKVVHELKDYLKSCNADIHVIV--KI-ESADSI-PNLHSIISA-----SDGAMVAR 338 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lSf---V~sa~dv~~v~~~L~~~~~~i~IIa--kI-ET~~gv-~NldeI~~~-----sDgImIgR 338 (453)
+.++.+.+.|.|+|-+.. ..+. ++.++++.+.+.|-.+..+. .+ .....+ +.+...+.. +..|.+..
T Consensus 27 ~~l~~a~~~G~~~vEl~~~~~~~~~-~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~~ 105 (264)
T 1yx1_A 27 SFLPLLAMAGAQRVELREELFAGPP-DTEALTAAIQLQGLECVFSSPLELWREDGQLNPELEPTLRRAEACGAGWLKVSL 105 (264)
T ss_dssp GGHHHHHHHTCSEEEEEGGGCSSCC-CHHHHHHHHHHTTCEEEEEEEEEEECTTSSBCTTHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHHcCCCEEEEEHHhcCCCH-HHHHHHHHHHHcCCEEEEecchhhcCCchhHHHHHHHHHHHHHHcCCCEEEEec
Confidence 355677789999987752 1223 78888999988765433221 12 112234 555555443 56777766
Q ss_pred CCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHh-CccEEEecCcc----cCCC
Q 012943 339 GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVRE-GADAVMLSGET----AHGK 413 (453)
Q Consensus 339 GDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~-G~D~vmLs~ET----A~G~ 413 (453)
|+.... + ..+++...+.++|..+.+ |.+-.....+..++.++...+.. |.+ +-+.-+| ..|.
T Consensus 106 g~~~~~---~----~l~~l~~~a~~~Gv~l~l-----En~~~~~~~~~~~~~~ll~~v~~~~~~-vg~~~D~g~~~~~~~ 172 (264)
T 1yx1_A 106 GLLPEQ---P----DLAALGRRLARHGLQLLV-----ENDQTPQGGRIEVLERFFRLAERQQLD-LAMTFDIGNWRWQEQ 172 (264)
T ss_dssp ECCCSS---C----CHHHHHHHHTTSSCEEEE-----ECCSSHHHHCHHHHHHHHHHHHHTTCS-EEEEEETTGGGGGTC
T ss_pred CCCCcH---H----HHHHHHHHHHhcCCEEEE-----ecCCCCCCCCHHHHHHHHHHHHhcCCC-eEEEEehhhhhhcCC
Confidence 654321 1 445677778888876655 22211001233455555555532 344 4444455 3466
Q ss_pred CHHHHHHHH
Q 012943 414 FPLKAVKVM 422 (453)
Q Consensus 414 yP~eaV~~m 422 (453)
.|.+.++.+
T Consensus 173 d~~~~~~~~ 181 (264)
T 1yx1_A 173 AADEAALRL 181 (264)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHh
Confidence 777766554
No 278
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=40.75 E-value=1.9e+02 Score=27.62 Aligned_cols=90 Identities=21% Similarity=0.230 Sum_probs=49.9
Q ss_pred cCEEEEeCCCc--cccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHH-HHHHHHHHHhCccEEEecC
Q 012943 331 SDGAMVARGDL--GAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGADAVMLSG 407 (453)
Q Consensus 331 sDgImIgRGDL--g~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~D~vmLs~ 407 (453)
+||+++. |=- +..+..++-..+.+.+++.+ ....||+.- .+..+-.| +.-.-.+-..|+|++|+..
T Consensus 37 v~gl~v~-GttGE~~~Lt~~Er~~v~~~~~~~~-~grvpviaG---------vg~~~t~~ai~la~~a~~~Gadavlv~~ 105 (292)
T 3daq_A 37 AQAIIVN-GTTAESPTLTTDEKELILKTVIDLV-DKRVPVIAG---------TGTNDTEKSIQASIQAKALGADAIMLIT 105 (292)
T ss_dssp CCEEEES-SGGGTGGGSCHHHHHHHHHHHHHHH-TTSSCEEEE---------CCCSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred CCEEEEC-ccccccccCCHHHHHHHHHHHHHHh-CCCCcEEEe---------CCcccHHHHHHHHHHHHHcCCCEEEECC
Confidence 7999884 111 11112122222233333333 124677764 33444455 5555566778999999863
Q ss_pred cccCCCCHHHHHHHHHHHHHHHhc
Q 012943 408 ETAHGKFPLKAVKVMHTVALRTES 431 (453)
Q Consensus 408 ETA~G~yP~eaV~~m~~I~~~aE~ 431 (453)
=--...-+-+.++..+.|+..+.-
T Consensus 106 P~y~~~~~~~l~~~f~~ia~a~~l 129 (292)
T 3daq_A 106 PYYNKTNQRGLVKHFEAIADAVKL 129 (292)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHHCS
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCC
Confidence 322233357789999999988753
No 279
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A
Probab=40.63 E-value=20 Score=34.29 Aligned_cols=21 Identities=29% Similarity=0.393 Sum_probs=18.9
Q ss_pred CHHHHHHHHHhCCcEEEeecC
Q 012943 113 SREMIWKLAEEGMNVARLNMS 133 (453)
Q Consensus 113 s~e~i~~Li~aGmnvaRiNfS 133 (453)
+.+.++.|-+.|+|++||-++
T Consensus 33 ~~~di~~~~~~G~n~vRi~i~ 53 (305)
T 1h1n_A 33 DPNTIDTLISKGMNIFRVPFM 53 (305)
T ss_dssp CHHHHHHHHHTTCCEEEEEEC
T ss_pred CHHHHHHHHHCCCCEEEeccc
Confidence 478999999999999999886
No 280
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=40.00 E-value=88 Score=30.51 Aligned_cols=117 Identities=15% Similarity=0.214 Sum_probs=0.0
Q ss_pred HHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh-cCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCE---EE
Q 012943 295 VHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPV---IV 370 (453)
Q Consensus 295 v~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~-sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpv---i~ 370 (453)
...++.+.++.+..++|.........++.+.+-+.. .+-+||. +-.+++++=...-+++++.|++.|..| +=
T Consensus 67 ~~~v~~~A~~~~~~VPValHlDHg~~~e~i~~ai~~GFtSVMiD----gS~~p~eeNi~~Tk~vv~~ah~~gvsVEaElG 142 (288)
T 3q94_A 67 VAMVKALIEEMNITVPVAIHLDHGSSFEKCKEAIDAGFTSVMID----ASHHPFEENVETTKKVVEYAHARNVSVEAELG 142 (288)
T ss_dssp HHHHHHHHHHTTCCSCEEEEEEEECSHHHHHHHHHHTCSEEEEC----CTTSCHHHHHHHHHHHHHHHHTTTCEEEEEES
T ss_pred HHHHHHHHHhcCCCCcEEEECCCCCCHHHHHHHHHcCCCeEEEe----CCCCCHHHHHHHHHHHHHHHHHcCCeEEEEee
Q ss_pred EechhhhhccCCCCchHHHHHHHHHH-HhCccEEEecCcccCCCCH
Q 012943 371 ATNMLESMIDHPTPTRAEVSDIAIAV-REGADAVMLSGETAHGKFP 415 (453)
Q Consensus 371 aTqmLeSM~~~~~PtrAEv~Dv~nav-~~G~D~vmLs~ETA~G~yP 415 (453)
.+.=-|.-+....-......++..++ .-|+|++-.+--|+.|.||
T Consensus 143 ~vgG~Ed~~~~~~~~yT~Peea~~Fv~~TgvD~LAvaiGt~HG~Y~ 188 (288)
T 3q94_A 143 TVGGQEDDVIAEGVIYADPAECKHLVEATGIDCLAPALGSVHGPYK 188 (288)
T ss_dssp BCBCSCSSCGGGGCBCCCHHHHHHHHHHHCCSEEEECSSCBSSCCS
T ss_pred eeccccCCcCCccccCCCHHHHHHHHHHHCCCEEEEEcCcccCCcC
No 281
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=39.85 E-value=53 Score=31.34 Aligned_cols=140 Identities=16% Similarity=0.129 Sum_probs=72.2
Q ss_pred HHHHHhhhhcCCcEEEeccccCHHH-HHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhhcCEEEEeCCCcccc----
Q 012943 270 WEDIKFGVDNQVDFYAVSFVKDAKV-VHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAE---- 344 (453)
Q Consensus 270 ~~DI~~a~~~gvd~I~lSfV~sa~d-v~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~sDgImIgRGDLg~e---- 344 (453)
.+.++.+.+.|+|+|-.+|+.+..+ ++.++ +....+.+++.+.|++-.... .-.-+|.|.+- |.=+..
T Consensus 90 ~~~~~~~~~aGad~v~~~~~~~~~~~~~~~~----~~~~~i~l~~~v~~~~~~~~a--~~~Gad~I~v~-G~~~~g~~~e 162 (297)
T 2zbt_A 90 FVEAMILEAIGVDFIDESEVLTPADEEHHID----KWKFKVPFVCGARNLGEALRR--IAEGAAMIRTK-GEAGTGNVVE 162 (297)
T ss_dssp HHHHHHHHHTTCSEEEEETTSCCSCSSCCCC----GGGCSSCEEEEESSHHHHHHH--HHTTCSEEEEC-CCSSSCCTHH
T ss_pred HHHHHHHHHCCCCEEeeeCCCChHHHHHHHH----HhCCCceEEeecCCHHHHHHH--HHcCCCEEEEc-ccccCcchHH
Confidence 4556666788999997676544322 12121 112356777777776543221 11126776552 210000
Q ss_pred -----------------CCCCCH-------HHHHHHHHHHHHHcCCCEE-EEechhhhhccCCCCchHHHHHHHHHHHhC
Q 012943 345 -----------------LPIEDV-------PLLQEDIIRRCRSMQKPVI-VATNMLESMIDHPTPTRAEVSDIAIAVREG 399 (453)
Q Consensus 345 -----------------lg~e~v-------~~aqk~Ii~~c~~aGkpvi-~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G 399 (453)
+..... +...+.+-+.+...+.|++ .+ ..+.-+ ..|+..+...|
T Consensus 163 ~~~~~~~~~~~i~~~~g~t~~~~~~~~~~~~~~~~~i~~l~~~~~~pvi~~a--------~GGI~~---~e~i~~~~~aG 231 (297)
T 2zbt_A 163 AVRHARTMWKEIRYVQSLREDELMAYAKEIGAPFELVKWVHDHGRLPVVNFA--------AGGIAT---PADAALMMHLG 231 (297)
T ss_dssp HHHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHSSCSSCEEB--------CSSCCS---HHHHHHHHHTT
T ss_pred HHhhHHHHHHHHHHcCCcCCCCchhhhhcchhhHHHHHHHHHhcCCCcEEEe--------eCCCCC---HHHHHHHHHcC
Confidence 000000 0001222223334577865 22 234434 34666777889
Q ss_pred ccEEEecCcccCCCCHHHHHHHHHHHHH
Q 012943 400 ADAVMLSGETAHGKFPLKAVKVMHTVAL 427 (453)
Q Consensus 400 ~D~vmLs~ETA~G~yP~eaV~~m~~I~~ 427 (453)
+|++++..---....|.++++.|.+.+.
T Consensus 232 adgvvvGsai~~~~dp~~~~~~l~~~i~ 259 (297)
T 2zbt_A 232 MDGVFVGSGIFKSGDPRKRARAIVRAVA 259 (297)
T ss_dssp CSEEEECGGGGGSSCHHHHHHHHHHHHH
T ss_pred CCEEEEchHHhCCCCHHHHHHHHHHHHH
Confidence 9999986443333468899988877764
No 282
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=39.12 E-value=1.6e+02 Score=28.20 Aligned_cols=57 Identities=21% Similarity=0.100 Sum_probs=34.7
Q ss_pred CCCEEEEechhhhhccCCCCchHH-HHHHHHHHHhCccEEEecCcccCCCCHHHHHHHHHHHHHHHh
Q 012943 365 QKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (453)
Q Consensus 365 Gkpvi~aTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE 430 (453)
..||+.- .+..+-.| +.-.-.+-..|+|++|+..=--...-+-+.++..+.|+..+.
T Consensus 69 rvpviaG---------vg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~ 126 (294)
T 2ehh_A 69 RIKVIAG---------TGGNATHEAVHLTAHAKEVGADGALVVVPYYNKPTQRGLYEHFKTVAQEVD 126 (294)
T ss_dssp SSEEEEE---------CCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCC
T ss_pred CCcEEEe---------cCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 3667664 33444455 444555667799999986322222335677888888877654
No 283
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=38.95 E-value=1.7e+02 Score=27.92 Aligned_cols=95 Identities=17% Similarity=0.016 Sum_probs=49.9
Q ss_pred HHHHh-h-cCEEEEeCCCc--cccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHH-HHHHHHHHHhC
Q 012943 325 HSIIS-A-SDGAMVARGDL--GAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREG 399 (453)
Q Consensus 325 deI~~-~-sDgImIgRGDL--g~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAE-v~Dv~nav~~G 399 (453)
+..++ . +||+++. |=- +..+..++-..+.+.+++.++ ...|||.- .+..+-.| +.-.-.+-..|
T Consensus 31 ~~li~~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaG---------vg~~~t~~ai~la~~a~~~G 99 (293)
T 1f6k_A 31 RHNIDKMKVDGLYVG-GSTGENFMLSTEEKKEIFRIAKDEAK-DQIALIAQ---------VGSVNLKEAVELGKYATELG 99 (293)
T ss_dssp HHHHHTSCCSEEEES-SGGGTGGGSCHHHHHHHHHHHHHHHT-TSSEEEEE---------CCCSCHHHHHHHHHHHHHHT
T ss_pred HHHHhhCCCcEEEeC-ccccchhhCCHHHHHHHHHHHHHHhC-CCCeEEEe---------cCCCCHHHHHHHHHHHHhcC
Confidence 33445 3 7898874 111 111222222222333333322 24667764 33444445 44455666779
Q ss_pred ccEEEecCcccCCCCHHHHHHHHHHHHHHHh
Q 012943 400 ADAVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (453)
Q Consensus 400 ~D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE 430 (453)
+|++|+..=--...-+-+.++..+.|+..+.
T Consensus 100 adavlv~~P~y~~~~~~~l~~~f~~va~a~~ 130 (293)
T 1f6k_A 100 YDCLSAVTPFYYKFSFPEIKHYYDTIIAETG 130 (293)
T ss_dssp CSEEEEECCCSSCCCHHHHHHHHHHHHHHHC
T ss_pred CCEEEECCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 9999986322222335677888888887765
No 284
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=38.91 E-value=2.8e+02 Score=26.84 Aligned_cols=144 Identities=14% Similarity=0.065 Sum_probs=74.1
Q ss_pred ceeecCCCccCCCCCCHhhHHHHHhhhhcCC-cEEEeccccCHHHHHHHHHHHHhcCCCceEEEE--ecChhhhccHHHH
Q 012943 251 RHLNVRGKSANLPSITDKDWEDIKFGVDNQV-DFYAVSFVKDAKVVHELKDYLKSCNADIHVIVK--IESADSIPNLHSI 327 (453)
Q Consensus 251 KgVnlp~~~~~lp~ltekD~~DI~~a~~~gv-d~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIak--IET~~gv~NldeI 327 (453)
.++..|=..-++..+|. .+....+...|. -+|...++ +++.+.+.-+.+.+.-. .++.+. +-++.--+.++.+
T Consensus 23 l~~~~Pii~apM~gvs~--~~la~av~~aGglG~i~~~~~-~~~~l~~~i~~i~~~~~-~p~gVnl~~~~~~~~~~~~~~ 98 (326)
T 3bo9_A 23 LEIEHPILMGGMAWAGT--PTLAAAVSEAGGLGIIGSGAM-KPDDLRKAISELRQKTD-KPFGVNIILVSPWADDLVKVC 98 (326)
T ss_dssp HTCSSSEEECCCTTTSC--HHHHHHHHHTTSBEEEECTTC-CHHHHHHHHHHHHTTCS-SCEEEEEETTSTTHHHHHHHH
T ss_pred cCCCCCEEECCCCCCCC--HHHHHHHHhCCCcEEeCCCCC-CHHHHHHHHHHHHHhcC-CCEEEEEeccCCCHHHHHHHH
Confidence 34455544444444453 344455556665 44444443 66666554444444321 222222 2233323333333
Q ss_pred Hhh-cCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEec
Q 012943 328 ISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (453)
Q Consensus 328 ~~~-sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (453)
++. +|.|.++-++ + ..+++.+++.|.+++... .+ ..++..+...|+|++.+.
T Consensus 99 ~~~g~d~V~l~~g~-----p--------~~~~~~l~~~g~~v~~~v-----------~s---~~~a~~a~~~GaD~i~v~ 151 (326)
T 3bo9_A 99 IEEKVPVVTFGAGN-----P--------TKYIRELKENGTKVIPVV-----------AS---DSLARMVERAGADAVIAE 151 (326)
T ss_dssp HHTTCSEEEEESSC-----C--------HHHHHHHHHTTCEEEEEE-----------SS---HHHHHHHHHTTCSCEEEE
T ss_pred HHCCCCEEEECCCC-----c--------HHHHHHHHHcCCcEEEEc-----------CC---HHHHHHHHHcCCCEEEEE
Confidence 333 7999987553 2 235666778899988631 22 233446778899999996
Q ss_pred Cccc---CCCCHHHHHHHHHHHHH
Q 012943 407 GETA---HGKFPLKAVKVMHTVAL 427 (453)
Q Consensus 407 ~ETA---~G~yP~eaV~~m~~I~~ 427 (453)
+=.+ .|.. -....+..+..
T Consensus 152 g~~~GG~~G~~--~~~~ll~~i~~ 173 (326)
T 3bo9_A 152 GMESGGHIGEV--TTFVLVNKVSR 173 (326)
T ss_dssp CTTSSEECCSS--CHHHHHHHHHH
T ss_pred CCCCCccCCCc--cHHHHHHHHHH
Confidence 5222 2422 24455555544
No 285
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=38.83 E-value=1.5e+02 Score=28.77 Aligned_cols=84 Identities=19% Similarity=0.202 Sum_probs=48.1
Q ss_pred cCEEEEeCCCc--cccCCCCCHHHHHHHHHHHHHHc--CCCEEEEechhhhhccCCCCchHH-HHHHHHHHHhCccEEEe
Q 012943 331 SDGAMVARGDL--GAELPIEDVPLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGADAVML 405 (453)
Q Consensus 331 sDgImIgRGDL--g~elg~e~v~~aqk~Ii~~c~~a--Gkpvi~aTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~D~vmL 405 (453)
+||+++. |=- +..+. ..-++++++.+.++ ..|||.- .+..+-+| +.-.-.+-..|+|++|+
T Consensus 43 v~Gl~v~-GtTGE~~~Lt----~~Er~~v~~~~v~~~grvpViaG---------vg~~~t~~ai~la~~A~~~Gadavlv 108 (313)
T 3dz1_A 43 CEGVTVL-GILGEAPKLD----AAEAEAVATRFIKRAKSMQVIVG---------VSAPGFAAMRRLARLSMDAGAAGVMI 108 (313)
T ss_dssp CSEEEES-TGGGTGGGSC----HHHHHHHHHHHHHHCTTSEEEEE---------CCCSSHHHHHHHHHHHHHHTCSEEEE
T ss_pred CCEEEeC-ccCcChhhCC----HHHHHHHHHHHHHHcCCCcEEEe---------cCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 7899884 111 11122 12233444444333 4666663 34445555 44455666789999998
Q ss_pred cCcccCC-CCHHHHHHHHHHHHHHHh
Q 012943 406 SGETAHG-KFPLKAVKVMHTVALRTE 430 (453)
Q Consensus 406 s~ETA~G-~yP~eaV~~m~~I~~~aE 430 (453)
.. ..- .-+-+.++..+.|+..+.
T Consensus 109 ~~--P~~~~s~~~l~~~f~~va~a~~ 132 (313)
T 3dz1_A 109 AP--PPSLRTDEQITTYFRQATEAIG 132 (313)
T ss_dssp CC--CTTCCSHHHHHHHHHHHHHHHC
T ss_pred CC--CCCCCCHHHHHHHHHHHHHhCC
Confidence 53 331 224677889999988876
No 286
>3h43_A Proteasome-activating nucleotidase; regulatory particle, nucleosidase, ATP-binding, cytoplasm, nucleotide-binding, hydrolase; 2.10A {Methanocaldococcus jannaschii}
Probab=38.78 E-value=59 Score=25.89 Aligned_cols=59 Identities=19% Similarity=0.255 Sum_probs=32.3
Q ss_pred ecCCCeeeecCCCCceeecCCCEEEEEeecCCCCccEEEecccccc--cccccCCEEEEeC-CeeEEEE
Q 012943 164 DTKGPEVRSGDVPQPIILKEGQEFNFTIKRGVSTEDTVSVNYDDFV--NDVEVGDILLVDG-GMMSLAV 229 (453)
Q Consensus 164 DLkGPkIRtG~l~~~i~L~~G~~v~lt~~~~~~~~~~I~v~~~~l~--~~vk~Gd~IlIDD-G~I~L~V 229 (453)
.|++|-.-+|.+ +++-..+.+.+... +.....|+...++ +.++||++|.++. ....+.+
T Consensus 13 ~L~~~P~~vG~v---~e~~dd~~~iVkss----~g~~~~V~v~~~Vd~~~LkpG~rVaLn~~s~~Iv~v 74 (85)
T 3h43_A 13 RMRVPPLIVGTV---VDKVGERKVVVKSS----TGPSFLVNVSHFVNPDDLAPGKRVCLNQQTLTVVDV 74 (85)
T ss_dssp HHHSCCEEEEEE---EEEEETTEEEEEET----TSSEEEEEBCTTSCGGGCCTTCEEEECTTTCCEEEE
T ss_pred HhcCCCceEEEE---EEEcCCCEEEEEeC----CCCeEEEEecCccCHHHCCCCCEEEECCcccCHhhh
Confidence 355666666655 22222333333321 2234555555554 5899999999996 4444443
No 287
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=38.60 E-value=98 Score=31.05 Aligned_cols=42 Identities=24% Similarity=0.137 Sum_probs=27.8
Q ss_pred HHHHHHHHHhCccEEEecCccc-----CCCCHHHHHHHHHHHHHHHhcC
Q 012943 389 VSDIAIAVREGADAVMLSGETA-----HGKFPLKAVKVMHTVALRTESS 432 (453)
Q Consensus 389 v~Dv~nav~~G~D~vmLs~ETA-----~G~yP~eaV~~m~~I~~~aE~~ 432 (453)
-.|++.++..|||+|++..--. .| +....+++..+..+.+..
T Consensus 290 g~Dv~KaLalGAdaV~ig~~~l~a~~~~G--~~~v~~~l~~l~~eL~~~ 336 (365)
T 3sr7_A 290 PLDIIKALVLGAKAVGLSRTMLELVEQHS--VHEVIAIVNGWKEDLRLI 336 (365)
T ss_dssp HHHHHHHHHHTCSEEEESHHHHHHHHHSC--HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECHHHHHHHHhcC--hHHHHHHHHHHHHHHHHH
Confidence 5689999999999999965321 22 223345666666666543
No 288
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=38.59 E-value=1.3e+02 Score=28.79 Aligned_cols=70 Identities=24% Similarity=0.197 Sum_probs=45.3
Q ss_pred HHHHhhhhcCCcEEEe------ccccCHHHHHH-HHHHHHhcCCCceEEEEec---ChhhhccHHHHHhh-cCEEEEeCC
Q 012943 271 EDIKFGVDNQVDFYAV------SFVKDAKVVHE-LKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARG 339 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~l------SfV~sa~dv~~-v~~~L~~~~~~i~IIakIE---T~~gv~NldeI~~~-sDgImIgRG 339 (453)
+.+++.++.|+|+|.+ ++.-+.++-.+ ++...+..+.+++||+-+= |.++++......+. +|++|+-+-
T Consensus 26 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a~~~Gadavlv~~P 105 (291)
T 3a5f_A 26 ELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWAESIGVDGLLVITP 105 (291)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 4557778999999876 22334444433 3444455567889999873 46666666655544 899998754
Q ss_pred C
Q 012943 340 D 340 (453)
Q Consensus 340 D 340 (453)
.
T Consensus 106 ~ 106 (291)
T 3a5f_A 106 Y 106 (291)
T ss_dssp C
T ss_pred C
Confidence 3
No 289
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=38.58 E-value=1.3e+02 Score=27.32 Aligned_cols=118 Identities=14% Similarity=0.167 Sum_probs=64.9
Q ss_pred CCCCHh--hHHHH-HhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEe--cCh-------hhhccHHHHHhh
Q 012943 263 PSITDK--DWEDI-KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKI--ESA-------DSIPNLHSIISA 330 (453)
Q Consensus 263 p~ltek--D~~DI-~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakI--ET~-------~gv~NldeI~~~ 330 (453)
|..+.. +...+ +.+.+.|+++|.+ .+++.+..+++.. +++++.-+ .-+ .-.+.+++.++.
T Consensus 29 p~~~~~~~~~~~~a~~~~~~G~~~i~~---~~~~~i~~i~~~~-----~~p~i~~~~~~~~~~~~~i~~~~~~i~~~~~~ 100 (234)
T 1yxy_A 29 PLYSETGGIMPLMAKAAQEAGAVGIRA---NSVRDIKEIQAIT-----DLPIIGIIKKDYPPQEPFITATMTEVDQLAAL 100 (234)
T ss_dssp TTCCTTCCSHHHHHHHHHHHTCSEEEE---ESHHHHHHHHTTC-----CSCEEEECBCCCTTSCCCBSCSHHHHHHHHTT
T ss_pred CCcCCccchHHHHHHHHHHCCCcEeec---CCHHHHHHHHHhC-----CCCEEeeEcCCCCccccccCChHHHHHHHHHc
Confidence 444555 55444 5556789998865 4677777776543 34454221 100 112345555554
Q ss_pred -cCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHc--CCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEE--Ee
Q 012943 331 -SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAV--ML 405 (453)
Q Consensus 331 -sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~a--Gkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~v--mL 405 (453)
+|.|.++-.-+.-.-+ ..+ .++++.+++. +++++.-. .|. .++..+...|+|.+ .+
T Consensus 101 Gad~V~l~~~~~~~~~~-~~~----~~~i~~i~~~~~~~~v~~~~-----------~t~---~ea~~a~~~Gad~i~~~v 161 (234)
T 1yxy_A 101 NIAVIAMDCTKRDRHDG-LDI----ASFIRQVKEKYPNQLLMADI-----------STF---DEGLVAHQAGIDFVGTTL 161 (234)
T ss_dssp TCSEEEEECCSSCCTTC-CCH----HHHHHHHHHHCTTCEEEEEC-----------SSH---HHHHHHHHTTCSEEECTT
T ss_pred CCCEEEEcccccCCCCC-ccH----HHHHHHHHHhCCCCeEEEeC-----------CCH---HHHHHHHHcCCCEEeeec
Confidence 7988876432211000 122 4567777776 77766521 122 23557788999999 44
Q ss_pred cC
Q 012943 406 SG 407 (453)
Q Consensus 406 s~ 407 (453)
.+
T Consensus 162 ~g 163 (234)
T 1yxy_A 162 SG 163 (234)
T ss_dssp TT
T ss_pred cc
Confidence 43
No 290
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=38.46 E-value=2.2e+02 Score=27.71 Aligned_cols=120 Identities=16% Similarity=0.195 Sum_probs=71.0
Q ss_pred HHHHhhhhcCCcEEEeccc--cCHHHHHHHHHHHHhcCCCceEEEE--e-cChhhhccHHHHHhh-cCEEEEeCCCcccc
Q 012943 271 EDIKFGVDNQVDFYAVSFV--KDAKVVHELKDYLKSCNADIHVIVK--I-ESADSIPNLHSIISA-SDGAMVARGDLGAE 344 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lSfV--~sa~dv~~v~~~L~~~~~~i~IIak--I-ET~~gv~NldeI~~~-sDgImIgRGDLg~e 344 (453)
+||..+.+.|+|+|.+.+- +..-|+..++++++.++. +.+.-. + ++++-.+.+++++.. .|.|+-.-+--++.
T Consensus 115 ~dI~~~~~~GAdGvVfG~L~~dg~iD~~~~~~Li~~a~~-l~vTFHRAFD~~~d~~~Ale~Li~lGvdrILTSG~~~~a~ 193 (287)
T 3iwp_A 115 ADIRLAKLYGADGLVFGALTEDGHIDKELCMSLMAICRP-LPVTFHRAFDMVHDPMAALETLLTLGFERVLTSGCDSSAL 193 (287)
T ss_dssp HHHHHHHHTTCSEEEECCBCTTSCBCHHHHHHHHHHHTT-SCEEECGGGGGCSCHHHHHHHHHHHTCSEEEECTTSSSTT
T ss_pred HHHHHHHHcCCCEEEEeeeCCCCCcCHHHHHHHHHHcCC-CcEEEECchhccCCHHHHHHHHHHcCCCEEECCCCCCChH
Confidence 6888889999999999873 334688888888877654 222210 0 223355667777774 89999987644443
Q ss_pred CCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCc
Q 012943 345 LPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGE 408 (453)
Q Consensus 345 lg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~E 408 (453)
+.+..+++. ++. +.|+..|++ - +--+..-+.++.. ..|++.+-+|+-
T Consensus 194 ---~Gl~~Lk~L-v~~--a~~rI~Ima--------G-GGV~~~Ni~~l~~--~tG~~~~H~S~~ 240 (287)
T 3iwp_A 194 ---EGLPLIKRL-IEQ--AKGRIVVMP--------G-GGITDRNLQRILE--GSGATEFHCSAR 240 (287)
T ss_dssp ---TTHHHHHHH-HHH--HTTSSEEEE--------C-TTCCTTTHHHHHH--HHCCSEEEECCE
T ss_pred ---HhHHHHHHH-HHH--hCCCCEEEE--------C-CCcCHHHHHHHHH--hhCCCEEeECcC
Confidence 344444333 222 334555654 2 2222223443332 268999988864
No 291
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=38.44 E-value=55 Score=31.42 Aligned_cols=63 Identities=13% Similarity=0.151 Sum_probs=45.8
Q ss_pred HHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChh--hhccHHHHHhh-cCEEEEeC
Q 012943 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESAD--SIPNLHSIISA-SDGAMVAR 338 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~--gv~NldeI~~~-sDgImIgR 338 (453)
+.+..+++.|+|+|.++- -+++++..+.+.+.....+++|.| -- -.+|+.++++. +|++-+|.
T Consensus 193 ee~~~A~~aGaD~I~ld~-~~~~~l~~~v~~l~~~~~~~~i~A----sGGI~~~ni~~~~~aGaD~i~vGs 258 (273)
T 2b7n_A 193 EEAKNAMNAGADIVMCDN-LSVLETKEIAAYRDAHYPFVLLEA----SGNISLESINAYAKSGVDAISVGA 258 (273)
T ss_dssp HHHHHHHHHTCSEEEEET-CCHHHHHHHHHHHHHHCTTCEEEE----ESSCCTTTHHHHHTTTCSEEECTH
T ss_pred HHHHHHHHcCCCEEEECC-CCHHHHHHHHHHhhccCCCcEEEE----ECCCCHHHHHHHHHcCCcEEEEcH
Confidence 446667788999999986 468888888887765444555544 22 34788888887 89998874
No 292
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=38.42 E-value=54 Score=31.74 Aligned_cols=68 Identities=18% Similarity=0.281 Sum_probs=43.4
Q ss_pred CCcEEEEec--CCCC-------CCH----HHHHHHHHhCCcEEEeec-CC--C-----ChHHHHHHHHHHHHHHhhcCCC
Q 012943 99 RKTKIVCTI--GPST-------SSR----EMIWKLAEEGMNVARLNM-SH--G-----DHASHQKTIDLVKEYNSQFEDK 157 (453)
Q Consensus 99 r~TKIi~Ti--GPss-------~s~----e~i~~Li~aGmnvaRiNf-SH--g-----~~e~~~~~I~~iR~a~~~~~~~ 157 (453)
.+|+||+-| -|-| .+. +..++|+++|.++.=+|. |- | ..|++.+++..|+...++ +
T Consensus 4 ~~~~imgilN~TpDSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~-~-- 80 (280)
T 1eye_A 4 APVQVMGVLNVTDDSFSDGGCYLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ-G-- 80 (280)
T ss_dssp -CCEEEEEEECSCCTTCSSCCCCSHHHHHHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHT-T--
T ss_pred CCcEEEEEEeCCCCCcCCCcccCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcC-C--
Confidence 457788776 3521 122 345779999999999997 42 1 257788888888887654 3
Q ss_pred cEEEEeecCCCee
Q 012943 158 AVAIMLDTKGPEV 170 (453)
Q Consensus 158 ~iaIllDLkGPkI 170 (453)
+.|.+|+.-|++
T Consensus 81 -~piSIDT~~~~v 92 (280)
T 1eye_A 81 -ITVSIDTMRADV 92 (280)
T ss_dssp -CCEEEECSCHHH
T ss_pred -CEEEEeCCCHHH
Confidence 457779887764
No 293
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=38.41 E-value=37 Score=32.70 Aligned_cols=53 Identities=21% Similarity=0.246 Sum_probs=41.5
Q ss_pred HHHHHHHHhCCcEEEeecCCCChHHHHHHHHHHHHHHhhcCCCcEEEEeecCCCee
Q 012943 115 EMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEV 170 (453)
Q Consensus 115 e~i~~Li~aGmnvaRiNfSHg~~e~~~~~I~~iR~a~~~~~~~~iaIllDLkGPkI 170 (453)
+..++|+++|.++.=+|+--...++.+++...|+.+.+..+ +.|.+|+.=|++
T Consensus 38 ~~a~~~v~~GAdiIDIg~~s~~~eE~~rv~~vi~~l~~~~~---~pisIDT~~~~v 90 (271)
T 2yci_X 38 EWARRQAEKGAHYLDVNTGPTADDPVRVMEWLVKTIQEVVD---LPCCLDSTNPDA 90 (271)
T ss_dssp HHHHHHHHTTCSEEEEECCSCSSCHHHHHHHHHHHHHHHCC---CCEEEECSCHHH
T ss_pred HHHHHHHHCCCCEEEEcCCcCchhHHHHHHHHHHHHHHhCC---CeEEEeCCCHHH
Confidence 34678999999999999976777788889888888876654 557778875543
No 294
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=38.25 E-value=72 Score=31.20 Aligned_cols=60 Identities=10% Similarity=0.072 Sum_probs=40.9
Q ss_pred CcEEEEecCCCCCCHH----HHHHHHHhCCcEEEeecCCCChHHHHHHHHHHHHHHhhcCCCcEEEEeec
Q 012943 100 KTKIVCTIGPSTSSRE----MIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDT 165 (453)
Q Consensus 100 ~TKIi~TiGPss~s~e----~i~~Li~aGmnvaRiNfSHg~~e~~~~~I~~iR~a~~~~~~~~iaIllDL 165 (453)
+....+++|- .+++ ..+++.++|-+.+.+++.|++.+.-.+.++.+|++. + ..+.|++|.
T Consensus 133 ~vp~~~~~g~--~~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~---g-~~~~l~vDa 196 (359)
T 1mdl_A 133 PVQAYDSHSL--DGVKLATERAVTAAELGFRAVKTRIGYPALDQDLAVVRSIRQAV---G-DDFGIMVDY 196 (359)
T ss_dssp CEEEEEECCS--CHHHHHHHHHHHHHHTTCSEEEEECCCSSHHHHHHHHHHHHHHH---C-SSSEEEEEC
T ss_pred CeeeeeecCC--CCHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHHh---C-CCCEEEEEC
Confidence 4555666552 2333 355678899999999999988877777777777653 4 345667775
No 295
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=38.21 E-value=80 Score=28.43 Aligned_cols=86 Identities=14% Similarity=0.013 Sum_probs=45.7
Q ss_pred HHHHhhhhcCCcEEEeccccC-----HHHHHHHHHHHHhcCCCceEEEE--ecChhhhccHHHHHhh-cCEEEEeCCCcc
Q 012943 271 EDIKFGVDNQVDFYAVSFVKD-----AKVVHELKDYLKSCNADIHVIVK--IESADSIPNLHSIISA-SDGAMVARGDLG 342 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lSfV~s-----a~dv~~v~~~L~~~~~~i~IIak--IET~~gv~NldeI~~~-sDgImIgRGDLg 342 (453)
+.++.+.+.|+|+|.+.-+.. .-+...++++.+.. +++|++- |.+ .+|+.++++. +||+++|++=+.
T Consensus 158 e~~~~~~~~G~d~i~~~~~~~~g~~~~~~~~~i~~l~~~~--~~pvia~GGi~~---~~~~~~~~~~Ga~~v~vgsal~~ 232 (253)
T 1h5y_A 158 KWAKEVEELGAGEILLTSIDRDGTGLGYDVELIRRVADSV--RIPVIASGGAGR---VEHFYEAAAAGADAVLAASLFHF 232 (253)
T ss_dssp HHHHHHHHHTCSEEEEEETTTTTTCSCCCHHHHHHHHHHC--SSCEEEESCCCS---HHHHHHHHHTTCSEEEESHHHHT
T ss_pred HHHHHHHhCCCCEEEEecccCCCCcCcCCHHHHHHHHHhc--CCCEEEeCCCCC---HHHHHHHHHcCCcHHHHHHHHHc
Confidence 445666788999998743321 11233333333222 5566652 333 2455555555 899999975333
Q ss_pred ccCCCCCHHHHHHHHHHHHHHcCCCE
Q 012943 343 AELPIEDVPLLQEDIIRRCRSMQKPV 368 (453)
Q Consensus 343 ~elg~e~v~~aqk~Ii~~c~~aGkpv 368 (453)
...+ .+++.+..+++|.++
T Consensus 233 ~~~~-------~~~~~~~l~~~g~~~ 251 (253)
T 1h5y_A 233 RVLS-------IAQVKRYLKERGVEV 251 (253)
T ss_dssp TSSC-------HHHHHHHHHHTTCBC
T ss_pred CCCC-------HHHHHHHHHHcCCCC
Confidence 2222 234444456666653
No 296
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=38.12 E-value=1.7e+02 Score=28.71 Aligned_cols=90 Identities=19% Similarity=0.063 Sum_probs=46.7
Q ss_pred cCEEEEeC-CCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHH-HHHHHHHHHhCccEEEecCc
Q 012943 331 SDGAMVAR-GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGADAVMLSGE 408 (453)
Q Consensus 331 sDgImIgR-GDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~D~vmLs~E 408 (453)
+||+++.- .-=+..+..++-..+.+.+++.++ -..|||.-| +..+-.| +.-.-.+-..|+|++|+..=
T Consensus 69 v~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~-grvpViaGv---------g~~st~eai~la~~A~~~Gadavlv~~P 138 (332)
T 2r8w_A 69 VDSVGILGSTGIYMYLTREERRRAIEAAATILR-GRRTLMAGI---------GALRTDEAVALAKDAEAAGADALLLAPV 138 (332)
T ss_dssp CSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHT-TSSEEEEEE---------CCSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred CCEEEECccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEec---------CCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 78988741 111111222222223333333322 236777642 3334445 44455566679999998632
Q ss_pred ccCCCCHHHHHHHHHHHHHHHh
Q 012943 409 TAHGKFPLKAVKVMHTVALRTE 430 (453)
Q Consensus 409 TA~G~yP~eaV~~m~~I~~~aE 430 (453)
--...-+-+.++..+.|+..+.
T Consensus 139 ~Y~~~s~~~l~~~f~~VA~a~~ 160 (332)
T 2r8w_A 139 SYTPLTQEEAYHHFAAVAGATA 160 (332)
T ss_dssp CSSCCCHHHHHHHHHHHHHHCS
T ss_pred CCCCCCHHHHHHHHHHHHHhcC
Confidence 2222334677888888887664
No 297
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=38.11 E-value=2e+02 Score=26.00 Aligned_cols=89 Identities=6% Similarity=0.022 Sum_probs=56.4
Q ss_pred HHHHhhhhcCCcEEEeccc-----cCHHHHHHHHHHHHhcCCCceEEEE--ecChhhhccHHHHHhh--cCEEEEeCCCc
Q 012943 271 EDIKFGVDNQVDFYAVSFV-----KDAKVVHELKDYLKSCNADIHVIVK--IESADSIPNLHSIISA--SDGAMVARGDL 341 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lSfV-----~sa~dv~~v~~~L~~~~~~i~IIak--IET~~gv~NldeI~~~--sDgImIgRGDL 341 (453)
+.++.+.+.|.|+|-+... .+++++.++++.+++.|-.+..+.- .++.+.++..-++++. +..+.+-++
T Consensus 34 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~p~-- 111 (257)
T 3lmz_A 34 TTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYAVGPIYMKSEEEIDRAFDYAKRVGVKLIVGVPN-- 111 (257)
T ss_dssp HHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEEEEEEEEECSHHHHHHHHHHHHHHTCSEEEEEEC--
T ss_pred HHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEEEEeccccCCHHHHHHHHHHHHHhCCCEEEecCC--
Confidence 4567778899999977643 3678889999999987754433321 1333333333333333 567776544
Q ss_pred cccCCCCCHHHHHHHHHHHHHHcCCCEEE
Q 012943 342 GAELPIEDVPLLQEDIIRRCRSMQKPVIV 370 (453)
Q Consensus 342 g~elg~e~v~~aqk~Ii~~c~~aGkpvi~ 370 (453)
. ...+++...|.++|..+.+
T Consensus 112 -----~----~~l~~l~~~a~~~gv~l~l 131 (257)
T 3lmz_A 112 -----Y----ELLPYVDKKVKEYDFHYAI 131 (257)
T ss_dssp -----G----GGHHHHHHHHHHHTCEEEE
T ss_pred -----H----HHHHHHHHHHHHcCCEEEE
Confidence 1 2346788889999998765
No 298
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=38.03 E-value=1.6e+02 Score=28.26 Aligned_cols=57 Identities=21% Similarity=0.172 Sum_probs=33.5
Q ss_pred CCCEEEEechhhhhccCCCCchHH-HHHHHHHHHhCccEEEecCcccCCCCHHHHHHHHHHHHHHHh
Q 012943 365 QKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (453)
Q Consensus 365 Gkpvi~aTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE 430 (453)
..||+.- .+..+-.| +.-.-.+-..|+|++|+..=--...-+-+.++..+.|+..+.
T Consensus 81 rvpViaG---------vg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~ 138 (301)
T 1xky_A 81 RVPVIAG---------TGSNNTHASIDLTKKATEVGVDAVMLVAPYYNKPSQEGMYQHFKAIAESTP 138 (301)
T ss_dssp SSCEEEE---------CCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHTCS
T ss_pred CceEEeC---------CCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 4677764 33334445 444555666799999885332222335667778888876543
No 299
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=37.92 E-value=50 Score=34.12 Aligned_cols=98 Identities=10% Similarity=0.052 Sum_probs=53.4
Q ss_pred CCHhhHHHH-HhhhhcCCcEEEeccccCH---------------------HHHHHHHHHHHhcCCCceEEE--EecChhh
Q 012943 265 ITDKDWEDI-KFGVDNQVDFYAVSFVKDA---------------------KVVHELKDYLKSCNADIHVIV--KIESADS 320 (453)
Q Consensus 265 ltekD~~DI-~~a~~~gvd~I~lSfV~sa---------------------~dv~~v~~~L~~~~~~i~IIa--kIET~~g 320 (453)
+++.|..++ +.+.+.|+|+|.++---.. ..+..+++.-+..+.+++||+ -|.|++-
T Consensus 308 ~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~GGI~s~~D 387 (443)
T 1tv5_A 308 LNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLD 387 (443)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEEECCCCCHHH
Confidence 566676666 4557799999988753110 012233333333445788887 4666544
Q ss_pred hccHHHHHhhcCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCC
Q 012943 321 IPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQK 366 (453)
Q Consensus 321 v~NldeI~~~sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGk 366 (453)
. .+-|.+-+|+|++||+=|.- |..-+..+.+.+.....+.|.
T Consensus 388 A--~e~l~aGAd~Vqigrall~~--gP~l~~~i~~~l~~~l~~~G~ 429 (443)
T 1tv5_A 388 A--LEKIEAGASVCQLYSCLVFN--GMKSAVQIKRELNHLLYQRGY 429 (443)
T ss_dssp H--HHHHHTTEEEEEESHHHHHH--GGGHHHHHHHHHHHHHHHHTC
T ss_pred H--HHHHHcCCCEEEEcHHHHhc--ChHHHHHHHHHHHHHHHHhCC
Confidence 3 22222238999999885531 222233444444444555553
No 300
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=37.77 E-value=66 Score=31.25 Aligned_cols=74 Identities=14% Similarity=0.145 Sum_probs=40.3
Q ss_pred CCHhhHHHH-HhhhhcCCcEEEecccc------------------CH-----HHHHHHHHHHHhcCCCceEEE--EecCh
Q 012943 265 ITDKDWEDI-KFGVDNQVDFYAVSFVK------------------DA-----KVVHELKDYLKSCNADIHVIV--KIESA 318 (453)
Q Consensus 265 ltekD~~DI-~~a~~~gvd~I~lSfV~------------------sa-----~dv~~v~~~L~~~~~~i~IIa--kIET~ 318 (453)
++..|...+ +.+.+.|+|+|.++--. +. ..+..+++.-+..+.+++||+ -|-|+
T Consensus 222 ~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~~ 301 (336)
T 1f76_A 222 LSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDSV 301 (336)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEESSCCSH
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEECCCCCH
Confidence 455565443 56678999999886310 00 112222222222344688886 46655
Q ss_pred hhhccHHHHHhh-cCEEEEeCCCc
Q 012943 319 DSIPNLHSIISA-SDGAMVARGDL 341 (453)
Q Consensus 319 ~gv~NldeI~~~-sDgImIgRGDL 341 (453)
+-+ .+.++. +|+|++||+=|
T Consensus 302 ~da---~~~l~~GAd~V~igr~~l 322 (336)
T 1f76_A 302 IAA---REKIAAGASLVQIYSGFI 322 (336)
T ss_dssp HHH---HHHHHHTCSEEEESHHHH
T ss_pred HHH---HHHHHCCCCEEEeeHHHH
Confidence 443 222223 89999998643
No 301
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=37.64 E-value=83 Score=30.67 Aligned_cols=104 Identities=14% Similarity=0.192 Sum_probs=66.7
Q ss_pred hHHHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEe-c-ChhhhccHHHHHhh-cCEEEEeCCCccccC
Q 012943 269 DWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKI-E-SADSIPNLHSIISA-SDGAMVARGDLGAEL 345 (453)
Q Consensus 269 D~~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakI-E-T~~gv~NldeI~~~-sDgImIgRGDLg~el 345 (453)
-+++.+...+.|+|.|.+.-+.+.+++.++.+.+ ++++++.+ | .....-+.+|+.+. .+.+++++.=+.
T Consensus 169 ai~ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~-----~iP~~~N~~~~g~~p~~~~~eL~~~G~~~v~~~~~~~~--- 240 (295)
T 1xg4_A 169 AIERAQAYVEAGAEMLFPEAITELAMYRQFADAV-----QVPILANITEFGATPLFTTDELRSAHVAMALYPLSAFR--- 240 (295)
T ss_dssp HHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHH-----CSCBEEECCSSSSSCCCCHHHHHHTTCSEEEESSHHHH---
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHc-----CCCEEEEecccCCCCCCCHHHHHHcCCCEEEEChHHHH---
Confidence 3455566678999999999888888888888777 36677654 4 23456788888877 889998744221
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHH
Q 012943 346 PIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDI 392 (453)
Q Consensus 346 g~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv 392 (453)
....+..+..+.-++.|... .+.+.| +++.|+.+.
T Consensus 241 ---aa~~a~~~~~~~i~~~g~~~----~~~~~~-----~~~~e~~~l 275 (295)
T 1xg4_A 241 ---AMNRAAEHVYNVLRQEGTQK----SVIDTM-----QTRNELYES 275 (295)
T ss_dssp ---HHHHHHHHHHHHHHHHSSSG----GGGGGS-----CCHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHhCCcc----cccccC-----CCHHHHHHH
Confidence 12233444555555666542 222333 567776654
No 302
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=37.58 E-value=3.1e+02 Score=26.98 Aligned_cols=128 Identities=16% Similarity=0.186 Sum_probs=66.0
Q ss_pred CCCHhhHHHH--------HhhhhcCCcEEEec---------cccC----------------HHHHHHHHHHHH-hcCCCc
Q 012943 264 SITDKDWEDI--------KFGVDNQVDFYAVS---------FVKD----------------AKVVHELKDYLK-SCNADI 309 (453)
Q Consensus 264 ~ltekD~~DI--------~~a~~~gvd~I~lS---------fV~s----------------a~dv~~v~~~L~-~~~~~i 309 (453)
.||..|++.+ +.+.+.|+|+|=+. |... +.-+.++-+.+. ..+.+.
T Consensus 132 ~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~ 211 (343)
T 3kru_A 132 ELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENK 211 (343)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTS
T ss_pred hcCHHHHHHHHHHHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccC
Confidence 5788888777 23357899999776 3211 111223333333 346677
Q ss_pred eEEEEecChh------hhccHHHHHhh----cCEEEEeCCCccc-cCCC-CCHHHHHHHHHHHHH-HcCCCEEEEechhh
Q 012943 310 HVIVKIESAD------SIPNLHSIISA----SDGAMVARGDLGA-ELPI-EDVPLLQEDIIRRCR-SMQKPVIVATNMLE 376 (453)
Q Consensus 310 ~IIakIET~~------gv~NldeI~~~----sDgImIgRGDLg~-elg~-e~v~~aqk~Ii~~c~-~aGkpvi~aTqmLe 376 (453)
.|..||---+ .+++.-++++. +|.|-+.-|...- .+.. +. .+-..++..+ ..++|++...
T Consensus 212 pv~vRls~~~~~~~g~~~~~~~~~a~~l~~~vd~i~vs~g~~~~~~~~~~~~---~~~~~~~~ir~~~~iPVi~~G---- 284 (343)
T 3kru_A 212 PIFVRVSADDYMEGGINIDMMVEYINMIKDKVDLIDVSSGGLLNVDINLYPG---YQVKYAETIKKRCNIKTSAVG---- 284 (343)
T ss_dssp CEEEEEECCCSSTTSCCHHHHHHHHHHHTTTCSEEEEECCCSSCCCCCCCTT---TTHHHHHHHHHHHTCEEEEES----
T ss_pred CeEEEeechhhhccCccHHHHHHHHHHhhccccEEeccCCceEeeeecccCc---eeehHHHHHHHhcCcccceee----
Confidence 8888884321 12333334332 6888774343321 1111 11 1112222222 3478888742
Q ss_pred hhccCCCCchHHHHHHHHHHHhC-ccEEEec
Q 012943 377 SMIDHPTPTRAEVSDIAIAVREG-ADAVMLS 406 (453)
Q Consensus 377 SM~~~~~PtrAEv~Dv~nav~~G-~D~vmLs 406 (453)
..-+. .+.-.++..| +|.|++.
T Consensus 285 -----gi~t~---e~Ae~~l~~G~aD~V~iG 307 (343)
T 3kru_A 285 -----LITTQ---ELAEEILSNERADLVALG 307 (343)
T ss_dssp -----SCCCH---HHHHHHHHTTSCSEEEES
T ss_pred -----eeeHH---HHHHHHHhchhhHHHHHH
Confidence 22222 2334678888 9999986
No 303
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=37.24 E-value=2.5e+02 Score=27.71 Aligned_cols=41 Identities=15% Similarity=0.075 Sum_probs=26.7
Q ss_pred HHHHHHHH-c--CCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCc
Q 012943 356 DIIRRCRS-M--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGE 408 (453)
Q Consensus 356 ~Ii~~c~~-a--Gkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~E 408 (453)
+++...++ . ..|+|.. .+.-| ..|+..++..|+|+||+...
T Consensus 263 ~~v~~i~~~~~~~ipIIg~---------GGI~s---~~da~~~l~aGAd~V~igra 306 (345)
T 3oix_A 263 ANVHAFYKRLNPSIQIIGT---------GGVXT---GRDAFEHILCGASMVQIGTA 306 (345)
T ss_dssp HHHHHHHTTSCTTSEEEEE---------SSCCS---HHHHHHHHHHTCSEEEESHH
T ss_pred HHHHHHHHHcCCCCcEEEE---------CCCCC---hHHHHHHHHhCCCEEEEChH
Confidence 34444444 4 4677763 44444 45778888999999999744
No 304
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=37.11 E-value=1.9e+02 Score=27.48 Aligned_cols=57 Identities=21% Similarity=0.078 Sum_probs=34.4
Q ss_pred CCCEEEEechhhhhccCCCCchHH-HHHHHHHHHhCccEEEecCcccCCCCHHHHHHHHHHHHHHHh
Q 012943 365 QKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (453)
Q Consensus 365 Gkpvi~aTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE 430 (453)
..||+.- .+..+-.| +.-.-.+-..|+|++|+..=--...-+-+.++..+.|+..+.
T Consensus 69 r~pviaG---------vg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~ 126 (289)
T 2yxg_A 69 RVQVIAG---------AGSNCTEEAIELSVFAEDVGADAVLSITPYYNKPTQEGLRKHFGKVAESIN 126 (289)
T ss_dssp SSEEEEE---------CCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCS
T ss_pred CCcEEEe---------CCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 3667664 33444445 444555666799999986322222334667888888877654
No 305
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=36.62 E-value=1.5e+02 Score=30.07 Aligned_cols=55 Identities=15% Similarity=0.383 Sum_probs=36.6
Q ss_pred cCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHh-Cc-cEEEe
Q 012943 331 SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVRE-GA-DAVML 405 (453)
Q Consensus 331 sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~-G~-D~vmL 405 (453)
+|.+=||-+|+. .++ +++.+.+.|||+|+.|. .-|.+|+...+..+.. |. +.++|
T Consensus 135 vd~~KIgS~~~~------N~p-----LL~~va~~gKPViLStG---------maTl~Ei~~Ave~i~~~Gn~~iiLl 191 (385)
T 1vli_A 135 PSAFKIASYEIN------HLP-----LLKYVARLNRPMIFSTA---------GAEISDVHEAWRTIRAEGNNQIAIM 191 (385)
T ss_dssp CSCEEECGGGTT------CHH-----HHHHHHTTCSCEEEECT---------TCCHHHHHHHHHHHHTTTCCCEEEE
T ss_pred CCEEEECccccc------CHH-----HHHHHHhcCCeEEEECC---------CCCHHHHHHHHHHHHHCCCCcEEEE
Confidence 577777766664 333 35556678999998765 3477888888877764 55 55555
No 306
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=36.49 E-value=2e+02 Score=27.72 Aligned_cols=90 Identities=14% Similarity=0.065 Sum_probs=47.6
Q ss_pred cCEEEEeCC-CccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHH-HHHHHHHHHhCccEEEecCc
Q 012943 331 SDGAMVARG-DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGADAVMLSGE 408 (453)
Q Consensus 331 sDgImIgRG-DLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~D~vmLs~E 408 (453)
+||+++.-. -=+..+..++-..+.+.+++.++ ...|||.- .+..+-.| +.-.-.+-..|+|++|+..=
T Consensus 51 v~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaG---------vg~~st~~ai~la~~A~~~Gadavlv~~P 120 (304)
T 3cpr_A 51 LDSLVLAGTTGESPTTTAAEKLELLKAVREEVG-DRAKLIAG---------VGTNNTRTSVELAEAAASAGADGLLVVTP 120 (304)
T ss_dssp CCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHT-TTSEEEEE---------CCCSCHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCEEEECccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEec---------CCCCCHHHHHHHHHHHHhcCCCEEEECCC
Confidence 789987410 11111222222222233333321 23677764 34444455 44555667789999998633
Q ss_pred ccCCCCHHHHHHHHHHHHHHHh
Q 012943 409 TAHGKFPLKAVKVMHTVALRTE 430 (453)
Q Consensus 409 TA~G~yP~eaV~~m~~I~~~aE 430 (453)
--...-+-+.++..+.|+..+.
T Consensus 121 ~y~~~~~~~l~~~f~~ia~a~~ 142 (304)
T 3cpr_A 121 YYSKPSQEGLLAHFGAIAAATE 142 (304)
T ss_dssp CSSCCCHHHHHHHHHHHHHHCC
T ss_pred CCCCCCHHHHHHHHHHHHHhcC
Confidence 2122235677888888887654
No 307
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A*
Probab=36.47 E-value=58 Score=30.91 Aligned_cols=52 Identities=12% Similarity=0.092 Sum_probs=32.4
Q ss_pred CHHHHHHHHH-hCCcEEEeecCCC------ChHHHHHHHHHHHHHHhhcCCCcEEEEeecCC
Q 012943 113 SREMIWKLAE-EGMNVARLNMSHG------DHASHQKTIDLVKEYNSQFEDKAVAIMLDTKG 167 (453)
Q Consensus 113 s~e~i~~Li~-aGmnvaRiNfSHg------~~e~~~~~I~~iR~a~~~~~~~~iaIllDLkG 167 (453)
+.+.++.|.+ .|+|++|+-+... +++.+.+.++.+=+...+.+ +.+++|+-+
T Consensus 44 ~~~d~~~l~~~~G~N~vRi~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~G---l~vild~h~ 102 (306)
T 2cks_A 44 TDSSLDALAYDWKADIIRLSMYIQEDGYETNPRGFTDRMHQLIDMATARG---LYVIVDWHI 102 (306)
T ss_dssp SHHHHHHHHHTSCCSEEEEEEESSTTSGGGCHHHHHHHHHHHHHHHHTTT---CEEEEEEEC
T ss_pred CHHHHHHHHHHcCCCEEEEEeeecCCCcccCHHHHHHHHHHHHHHHHHCC---CEEEEEecC
Confidence 4678888986 6999999987642 22223333444334444444 678888754
No 308
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=36.45 E-value=1.5e+02 Score=28.40 Aligned_cols=101 Identities=15% Similarity=0.193 Sum_probs=57.7
Q ss_pred hH-HHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCC-CceEEEEe-----c----ChhhhccHHHHHhhcCEEEEe
Q 012943 269 DW-EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNA-DIHVIVKI-----E----SADSIPNLHSIISASDGAMVA 337 (453)
Q Consensus 269 D~-~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~-~i~IIakI-----E----T~~gv~NldeI~~~sDgImIg 337 (453)
|. +-|+.+.+.|++.+.++- -+.++...+.++..+... ...+.+-+ + +.+-++.++++++....+-||
T Consensus 18 d~~~vl~~a~~~gV~~~v~~g-~~~~~~~~~~~la~~~~~~~~~v~~~~GiHP~~~~~~~~~~~~~l~~l~~~~~vvaIG 96 (287)
T 3rcm_A 18 QQAAIVERALEAGVTQMLLTG-TSLAVSEQALELCQQLDASGAHLFATAGVHPHDAKAWDTDSERQLRLLLSEPRVRAVG 96 (287)
T ss_dssp CHHHHHHHHHHTTEEEEEECC-CSHHHHHHHHHHHHHHCTTSSSEEEEECCCGGGGGGCCTTHHHHHHHHHTSTTEEEEE
T ss_pred CHHHHHHHHHHcCCeEEEEec-CCHHHHHHHHHHHHhCCCCCceEEEEEEECcCccccCCHHHHHHHHHHhcCCCeEEEE
Confidence 44 445777889999877663 467777777666655332 22344433 1 223345555555444456665
Q ss_pred CCCccccCCCC-CHHHHH----HHHHHHHHHcCCCEEEEe
Q 012943 338 RGDLGAELPIE-DVPLLQ----EDIIRRCRSMQKPVIVAT 372 (453)
Q Consensus 338 RGDLg~elg~e-~v~~aq----k~Ii~~c~~aGkpvi~aT 372 (453)
..|.+.... .-...| .+.++.|++.|+|+++-|
T Consensus 97 --EiGLD~~~~~~~~~~Q~~~F~~ql~lA~e~~lPv~iH~ 134 (287)
T 3rcm_A 97 --ECGLDFNRDFSPRPLQEKALEAQLTLAAQLRLPVFLHE 134 (287)
T ss_dssp --EEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred --EeeeCCCcccCcHHHHHHHHHHHHHHHHHhCCCEEEEc
Confidence 333333221 112233 566788999999999965
No 309
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=36.34 E-value=93 Score=30.56 Aligned_cols=70 Identities=27% Similarity=0.336 Sum_probs=48.3
Q ss_pred CCCcEEEEec--CCCCCC-----------HHHHHHHHHhCCcEEEeec-CC--CC-----hHHHHHHHHHHHHHHhhcCC
Q 012943 98 RRKTKIVCTI--GPSTSS-----------REMIWKLAEEGMNVARLNM-SH--GD-----HASHQKTIDLVKEYNSQFED 156 (453)
Q Consensus 98 ~r~TKIi~Ti--GPss~s-----------~e~i~~Li~aGmnvaRiNf-SH--g~-----~e~~~~~I~~iR~a~~~~~~ 156 (453)
..+|+||+-| -|-|-+ .+..++|+++|.++.=+|. |- |. .|++.+++..|+.+.++.+
T Consensus 7 ~~~~~iMGIlNvTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~~- 85 (314)
T 2vef_A 7 HAKTVICGIINVTPDSFSDGGQFFALEQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKESD- 85 (314)
T ss_dssp CCCCEEEEEEECCC---------CHHHHHHHHHHHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred CCCceEEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhCC-
Confidence 3678999877 353321 2346789999999999998 42 22 2889989888888876654
Q ss_pred CcEEEEeecCCCee
Q 012943 157 KAVAIMLDTKGPEV 170 (453)
Q Consensus 157 ~~iaIllDLkGPkI 170 (453)
+.|.+|+.=|++
T Consensus 86 --vpiSIDT~~~~V 97 (314)
T 2vef_A 86 --VLISIDTWKSQV 97 (314)
T ss_dssp --CEEEEECSCHHH
T ss_pred --ceEEEeCCCHHH
Confidence 667889877654
No 310
>2wg5_A General control protein GCN4, proteasome-activating nucleotidase; transcription hydrolase complex, nucleotide-binding; 2.10A {Saccharomyces cerevisiae} PDB: 2wg6_A
Probab=36.29 E-value=1.2e+02 Score=25.02 Aligned_cols=60 Identities=15% Similarity=0.215 Sum_probs=32.4
Q ss_pred ecCCCeeeecCCCCceeecCCCEEEEEeecCCCCccEEEecccccc--cccccCCEEEEeC-CeeEEEEE
Q 012943 164 DTKGPEVRSGDVPQPIILKEGQEFNFTIKRGVSTEDTVSVNYDDFV--NDVEVGDILLVDG-GMMSLAVK 230 (453)
Q Consensus 164 DLkGPkIRtG~l~~~i~L~~G~~v~lt~~~~~~~~~~I~v~~~~l~--~~vk~Gd~IlIDD-G~I~L~V~ 230 (453)
.|++|-.-+|.+ .++-..+++.+... +.....|+...++ +.++||++|.++. ....+.+.
T Consensus 32 ~L~~~P~~Vg~v---~e~~d~~~~iVk~s----~g~~~~V~v~~~Vd~~~LkpG~rVaLn~~s~~Iv~iL 94 (109)
T 2wg5_A 32 RLRSPPLLVGVV---SDILEDGRVVVKSS----TGPKFVVNTSQYINEEELKPGARVALNQQTLAIVNVL 94 (109)
T ss_dssp HHHSCCEEEEEE---EEECTTSCEEEEET----TSCEEEECBCTTSCTTTCCTTCEEEEETTTCCEEEEE
T ss_pred HHhCCCceEEEE---EEEecCCEEEEEeC----CCCEEEEEcccccCHHHCCCCCEEEECCcceEeEEeC
Confidence 455666666655 22222333333321 1234455544433 5799999999997 55544444
No 311
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=36.11 E-value=3.1e+02 Score=26.59 Aligned_cols=128 Identities=16% Similarity=0.168 Sum_probs=65.9
Q ss_pred CCCHhhHHHH--------HhhhhcCCcEEEeccc-------------cC------------HHHHHHHHHHHHhcCCCce
Q 012943 264 SITDKDWEDI--------KFGVDNQVDFYAVSFV-------------KD------------AKVVHELKDYLKSCNADIH 310 (453)
Q Consensus 264 ~ltekD~~DI--------~~a~~~gvd~I~lSfV-------------~s------------a~dv~~v~~~L~~~~~~i~ 310 (453)
.||..|++++ +.+.+.|+|+|=+... +. +.-+.++-+.+.+.= +..
T Consensus 133 ~mt~~eI~~~i~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v-~~p 211 (338)
T 1z41_A 133 EMSAEKVKETVQEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVW-DGP 211 (338)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSC
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHc-CCc
Confidence 5788887665 2336789999865432 11 111223323333322 577
Q ss_pred EEEEecCh---h-h--hccHHHHHhh-----cCEEEEeCCCcc-c--cCCCC-CHHHHHHHHHHHHHHcCCCEEEEechh
Q 012943 311 VIVKIESA---D-S--IPNLHSIISA-----SDGAMVARGDLG-A--ELPIE-DVPLLQEDIIRRCRSMQKPVIVATNML 375 (453)
Q Consensus 311 IIakIET~---~-g--v~NldeI~~~-----sDgImIgRGDLg-~--elg~e-~v~~aqk~Ii~~c~~aGkpvi~aTqmL 375 (453)
|..||--- . | .+...++++. +|.|-+..+... . ..+.. .+. ..+++ .+..++|++..
T Consensus 212 v~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~-~~~~i---r~~~~iPVi~~---- 283 (338)
T 1z41_A 212 LFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVS-FAEKI---REQADMATGAV---- 283 (338)
T ss_dssp EEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHH-HHHHH---HHHHCCEEEEC----
T ss_pred EEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHH-HHHHH---HHHCCCCEEEE----
Confidence 88887331 1 1 2233333332 688888765432 1 11111 111 12222 23348888873
Q ss_pred hhhccCCCCchHHHHHHHHHHHhC-ccEEEecCc
Q 012943 376 ESMIDHPTPTRAEVSDIAIAVREG-ADAVMLSGE 408 (453)
Q Consensus 376 eSM~~~~~PtrAEv~Dv~nav~~G-~D~vmLs~E 408 (453)
...-+. .++..++..| +|.|++...
T Consensus 284 -----Ggi~s~---~~a~~~l~~G~aD~V~iGR~ 309 (338)
T 1z41_A 284 -----GMITDG---SMAEEILQNGRADLIFIGRE 309 (338)
T ss_dssp -----SSCCSH---HHHHHHHHTTSCSEEEECHH
T ss_pred -----CCCCCH---HHHHHHHHcCCceEEeecHH
Confidence 333343 3455778888 999999643
No 312
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=36.10 E-value=3e+02 Score=26.38 Aligned_cols=105 Identities=9% Similarity=0.116 Sum_probs=61.3
Q ss_pred HHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhhcCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEech
Q 012943 295 VHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNM 374 (453)
Q Consensus 295 v~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqm 374 (453)
++.++++..+. .+.++.-+=.+..++-+.+ .+|.+-||.+++- ..+ +++++.+.||||++.|.|
T Consensus 75 l~~l~~~~~~~--Gl~~~te~~d~~~~~~l~~---~~d~~kIga~~~~------n~~-----ll~~~a~~~kPV~lk~G~ 138 (280)
T 2qkf_A 75 LKIFEKVKAEF--GIPVITDVHEPHQCQPVAE---VCDVIQLPAFLAR------QTD-----LVVAMAKTGNVVNIKKPQ 138 (280)
T ss_dssp HHHHHHHHHHH--CCCEEEECCSGGGHHHHHH---HCSEEEECGGGTT------BHH-----HHHHHHHTCCEEEEECCT
T ss_pred HHHHHHHHHHc--CCcEEEecCCHHHHHHHHh---hCCEEEECccccc------CHH-----HHHHHHcCCCcEEEECCC
Confidence 44445554433 4556776666666655544 4799999865543 333 555556789999996543
Q ss_pred hhhhccCCCCchHHHHHHHHHHH-hCc-cEEEecCcccCCCCH-----HHHHHHHHH
Q 012943 375 LESMIDHPTPTRAEVSDIAIAVR-EGA-DAVMLSGETAHGKFP-----LKAVKVMHT 424 (453)
Q Consensus 375 LeSM~~~~~PtrAEv~Dv~nav~-~G~-D~vmLs~ETA~G~yP-----~eaV~~m~~ 424 (453)
- .|..|+...+..+. .|. +.+++-.-+.. .|+ +.++..|++
T Consensus 139 ~--------~t~~e~~~A~~~i~~~Gn~~i~L~~rg~~~-~~~~~~~dl~~i~~lk~ 186 (280)
T 2qkf_A 139 F--------LSPSQMKNIVEKFHEAGNGKLILCERGSSF-GYDNLVVDMLGFGVMKQ 186 (280)
T ss_dssp T--------SCGGGHHHHHHHHHHTTCCCEEEEECCEEC-STTCEECCTTHHHHHHH
T ss_pred C--------CCHHHHHHHHHHHHHcCCCeEEEEECCCCC-CCCccccCHHHHHHHHH
Confidence 2 25557777776665 465 45544323333 553 246666554
No 313
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=36.03 E-value=2.6e+02 Score=27.00 Aligned_cols=105 Identities=8% Similarity=0.107 Sum_probs=62.0
Q ss_pred HHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhhcCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEech
Q 012943 295 VHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNM 374 (453)
Q Consensus 295 v~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqm 374 (453)
++.++++..+. .+.++.-+-.+..++-+. +.+|.+-||.+++- ..+ +++++.+.||||++.|.|
T Consensus 78 l~~l~~~~~~~--Glp~~te~~d~~~~~~l~---~~vd~~kIgA~~~~------n~~-----Ll~~~a~~~kPV~lk~G~ 141 (292)
T 1o60_A 78 LKIFQELKDTF--GVKIITDVHEIYQCQPVA---DVVDIIQLPAFLAR------QTD-----LVEAMAKTGAVINVKKPQ 141 (292)
T ss_dssp HHHHHHHHHHH--CCEEEEECCSGGGHHHHH---TTCSEEEECGGGTT------CHH-----HHHHHHHTTCEEEEECCT
T ss_pred HHHHHHHHHHc--CCcEEEecCCHHHHHHHH---hcCCEEEECccccc------CHH-----HHHHHHcCCCcEEEeCCC
Confidence 44445554433 566777666666665544 45899999876653 223 555556889999996543
Q ss_pred hhhhccCCCCchHHHHHHHHHHH-hCc-cEEEecCcccCCCCHH-----HHHHHHHH
Q 012943 375 LESMIDHPTPTRAEVSDIAIAVR-EGA-DAVMLSGETAHGKFPL-----KAVKVMHT 424 (453)
Q Consensus 375 LeSM~~~~~PtrAEv~Dv~nav~-~G~-D~vmLs~ETA~G~yP~-----eaV~~m~~ 424 (453)
- .|..|+...+..+. .|. +.+++-.-+.. .|+- .++..|++
T Consensus 142 ~--------~t~~ei~~Av~~i~~~Gn~~i~L~~rg~~~-~y~~~~~dl~~i~~lk~ 189 (292)
T 1o60_A 142 F--------LSPSQMGNIVEKIEECGNDKIILCDRGTNF-GYDNLIVDMLGFSVMKK 189 (292)
T ss_dssp T--------SCGGGHHHHHHHHHHTTCCCEEEEECCEEC-STTCEECCTTHHHHHHH
T ss_pred C--------CCHHHHHHHHHHHHHcCCCeEEEEECCCCC-CCCccccCHHHHHHHHh
Confidence 2 25557777776665 465 45444323333 5642 45555543
No 314
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A
Probab=35.78 E-value=32 Score=33.26 Aligned_cols=20 Identities=35% Similarity=0.456 Sum_probs=18.3
Q ss_pred HHHHHHHHHhCCcEEEeecC
Q 012943 114 REMIWKLAEEGMNVARLNMS 133 (453)
Q Consensus 114 ~e~i~~Li~aGmnvaRiNfS 133 (453)
.+.++.|-+.|+|++|+-++
T Consensus 47 ~~~~~~~~~~G~n~vRi~~~ 66 (358)
T 1ece_A 47 RSMLDQIKSLGYNTIRLPYS 66 (358)
T ss_dssp HHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHHHcCCCEEEeecc
Confidence 67899999999999999987
No 315
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=35.70 E-value=2.3e+02 Score=27.00 Aligned_cols=89 Identities=19% Similarity=0.229 Sum_probs=49.1
Q ss_pred cCEEEEeCCCc--cccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHH-HHHHHHHHHhCccEEEecC
Q 012943 331 SDGAMVARGDL--GAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGADAVMLSG 407 (453)
Q Consensus 331 sDgImIgRGDL--g~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~D~vmLs~ 407 (453)
+||+++. |=- +..+..++-..+.+..++.++ ...||+.- .+..+-.| +.-.-.+-..|+|++|+..
T Consensus 36 v~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~-gr~pviaG---------vg~~~t~~ai~la~~a~~~Gadavlv~~ 104 (291)
T 3tak_A 36 TNSIVAV-GTTGEASTLSMEEHTQVIKEIIRVAN-KRIPIIAG---------TGANSTREAIELTKAAKDLGADAALLVT 104 (291)
T ss_dssp CCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEE---------CCCSSHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred CCEEEEC-ccccccccCCHHHHHHHHHHHHHHhC-CCCeEEEe---------CCCCCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 7899874 111 112222222233333333332 23677764 33444445 5555667778999999863
Q ss_pred cccCCCCHHHHHHHHHHHHHHHh
Q 012943 408 ETAHGKFPLKAVKVMHTVALRTE 430 (453)
Q Consensus 408 ETA~G~yP~eaV~~m~~I~~~aE 430 (453)
=--...-+-+.++..+.|+..+.
T Consensus 105 P~y~~~~~~~l~~~f~~ia~a~~ 127 (291)
T 3tak_A 105 PYYNKPTQEGLYQHYKAIAEAVE 127 (291)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCHHHHHHHHHHHHHhcC
Confidence 22122335678899999988764
No 316
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=35.60 E-value=3e+02 Score=26.30 Aligned_cols=101 Identities=11% Similarity=0.134 Sum_probs=68.2
Q ss_pred hhhcCCcEEEe-----ccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhc---cHHHHHhh-cCEEEEeCCCccccCC
Q 012943 276 GVDNQVDFYAV-----SFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIP---NLHSIISA-SDGAMVARGDLGAELP 346 (453)
Q Consensus 276 a~~~gvd~I~l-----SfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~---NldeI~~~-sDgImIgRGDLg~elg 346 (453)
..+.|+++|.+ .|-.+.+++..+++.. +++|+.| +.+- .+++.... +|+|.+.-.+|.
T Consensus 88 y~~~GA~~IsVltd~~~f~Gs~~~L~~ir~~v-----~lPVl~K----dfi~d~~qi~ea~~~GAD~VlLi~a~L~---- 154 (272)
T 3tsm_A 88 YEEGGAACLSVLTDTPSFQGAPEFLTAARQAC-----SLPALRK----DFLFDPYQVYEARSWGADCILIIMASVD---- 154 (272)
T ss_dssp HHHTTCSEEEEECCSTTTCCCHHHHHHHHHTS-----SSCEEEE----SCCCSTHHHHHHHHTTCSEEEEETTTSC----
T ss_pred HHHCCCCEEEEeccccccCCCHHHHHHHHHhc-----CCCEEEC----CccCCHHHHHHHHHcCCCEEEEcccccC----
Confidence 34679998876 3447888888887643 5777765 2222 24444444 899999877662
Q ss_pred CCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecC
Q 012943 347 IEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (453)
Q Consensus 347 ~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 407 (453)
....+.++..|+..|.-+++-+. +..| +-.+...|+|.+-.++
T Consensus 155 ----~~~l~~l~~~a~~lGl~~lvevh-----------~~eE---l~~A~~~ga~iIGinn 197 (272)
T 3tsm_A 155 ----DDLAKELEDTAFALGMDALIEVH-----------DEAE---MERALKLSSRLLGVNN 197 (272)
T ss_dssp ----HHHHHHHHHHHHHTTCEEEEEEC-----------SHHH---HHHHTTSCCSEEEEEC
T ss_pred ----HHHHHHHHHHHHHcCCeEEEEeC-----------CHHH---HHHHHhcCCCEEEECC
Confidence 23457788889999998887532 3334 5577889999887653
No 317
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=35.59 E-value=90 Score=30.48 Aligned_cols=69 Identities=17% Similarity=0.302 Sum_probs=47.9
Q ss_pred CCcEEEEecC--CCCCC-----------HHHHHHHHHhCCcEEEeecCC--------CChHHHHHHHHHHHHHHhhcCCC
Q 012943 99 RKTKIVCTIG--PSTSS-----------REMIWKLAEEGMNVARLNMSH--------GDHASHQKTIDLVKEYNSQFEDK 157 (453)
Q Consensus 99 r~TKIi~TiG--Pss~s-----------~e~i~~Li~aGmnvaRiNfSH--------g~~e~~~~~I~~iR~a~~~~~~~ 157 (453)
.+++||+-+. |-|-+ .+..++|++.|.++.=+|.-- ...|++.+++..|+.+.++.+
T Consensus 38 ~~~~iMgilNvTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~~-- 115 (297)
T 1tx2_A 38 EKTLIMGILNVTPDSFSDGGSYNEVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVK-- 115 (297)
T ss_dssp SSCEEEEECCCCCCTTCSSCBHHHHHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHSC--
T ss_pred CCCEEEEEEeCCCCccccCCccCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCC--
Confidence 3678888774 42211 234678999999999999732 125788888888887776654
Q ss_pred cEEEEeecCCCee
Q 012943 158 AVAIMLDTKGPEV 170 (453)
Q Consensus 158 ~iaIllDLkGPkI 170 (453)
+.|.+|+.-|++
T Consensus 116 -vpiSIDT~~~~V 127 (297)
T 1tx2_A 116 -LPISIDTYKAEV 127 (297)
T ss_dssp -SCEEEECSCHHH
T ss_pred -ceEEEeCCCHHH
Confidence 457779877664
No 318
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=35.21 E-value=75 Score=29.14 Aligned_cols=68 Identities=12% Similarity=0.149 Sum_probs=43.7
Q ss_pred hHHHHHhhhhcCCcEEEeccc-cCHHHH--HHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh--cCEEEEe
Q 012943 269 DWEDIKFGVDNQVDFYAVSFV-KDAKVV--HELKDYLKSCNADIHVIVKIESADSIPNLHSIISA--SDGAMVA 337 (453)
Q Consensus 269 D~~DI~~a~~~gvd~I~lSfV-~sa~dv--~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~--sDgImIg 337 (453)
+.+|+..+.+.|+|++++-|. .|+..| ..++++.......+..+.-.-+. ..+.+.+|+.. .|.+-+-
T Consensus 11 ~~eda~~a~~~GaD~iGfif~~~SpR~V~~~~a~~i~~~~~~~~~~VgVfvn~-~~~~i~~~~~~~~ld~vQLH 83 (205)
T 1nsj_A 11 NLEDALFSVESGADAVGFVFYPKSKRYISPEDARRISVELPPFVFRVGVFVNE-EPEKILDVASYVQLNAVQLH 83 (205)
T ss_dssp SHHHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHSCSSSEEEEEESSC-CHHHHHHHHHHHTCSEEEEC
T ss_pred cHHHHHHHHHcCCCEEEEEecCCCCCcCCHHHHHHHHHhCCCCCCEEEEEeCC-CHHHHHHHHHhhCCCEEEEC
Confidence 467888889999999998874 566554 45566555544445444433332 24555666654 6899884
No 319
>1vpz_A Carbon storage regulator homolog; CSRA-like fold, structural genomics, joint center for struct genomics, JCSG; HET: MSE; 2.05A {Pseudomonas aeruginosa} SCOP: b.151.1.1
Probab=35.00 E-value=53 Score=25.76 Aligned_cols=32 Identities=19% Similarity=0.268 Sum_probs=26.3
Q ss_pred cccccccCCEEEEeCCeeEEEEEEEeCCeEEEE
Q 012943 208 FVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCI 240 (453)
Q Consensus 208 l~~~vk~Gd~IlIDDG~I~L~V~ev~~~~v~~~ 240 (453)
|+-.=++|..|.|+| .|..+|.++.++.|+.-
T Consensus 14 LvLtRK~GEsI~IGd-dI~ItVl~i~g~qVrLG 45 (73)
T 1vpz_A 14 LILTRRVGETLMVGD-DVTVTVLGVKGNQVRIG 45 (73)
T ss_dssp EEEEEETTCEEEETT-TEEEEEEEEETTEEEEE
T ss_pred EEEEccCCCEEEeCC-CEEEEEEEEeCCEEEEE
Confidence 444558999999998 89999999999887653
No 320
>2bti_A Carbon storage regulator homolog; RMSA, CSRA, RNA binding protein; 2.0A {Yersinia enterocolitica} PDB: 1y00_A
Probab=34.66 E-value=56 Score=24.87 Aligned_cols=30 Identities=20% Similarity=0.308 Sum_probs=24.6
Q ss_pred ccccCCEEEEeCCeeEEEEEEEeCCeEEEEE
Q 012943 211 DVEVGDILLVDGGMMSLAVKSKTKDLVKCIV 241 (453)
Q Consensus 211 ~vk~Gd~IlIDDG~I~L~V~ev~~~~v~~~V 241 (453)
.-++|..|.|+| .|..+|.++.++.|+.-+
T Consensus 7 tRk~GE~I~Igd-~I~I~Vl~i~g~~VrlGI 36 (63)
T 2bti_A 7 TRRVGETLMIGD-EVTVTVLGVKGNQVRIGV 36 (63)
T ss_dssp EEETTCEEEETT-TEEEEEEEEETTEEEEEE
T ss_pred eccCCCeEEeCC-CEEEEEEEEeCCEEEEEE
Confidence 347899999988 899999999988876543
No 321
>1vhk_A Hypothetical protein YQEU; structural genomics, unknown function; 2.60A {Bacillus subtilis} SCOP: b.122.1.2 c.116.1.5
Probab=34.37 E-value=2e+02 Score=27.29 Aligned_cols=72 Identities=19% Similarity=0.253 Sum_probs=42.7
Q ss_pred ccccCCEEEEeCC---eeEEEEEEEeCCeEEEEEeeCcEecccc--eeecCCCccCCCCCCHhhHHHHHhhhhcCCcEEE
Q 012943 211 DVEVGDILLVDGG---MMSLAVKSKTKDLVKCIVVDGGELKSRR--HLNVRGKSANLPSITDKDWEDIKFGVDNQVDFYA 285 (453)
Q Consensus 211 ~vk~Gd~IlIDDG---~I~L~V~ev~~~~v~~~V~ngG~L~s~K--gVnlp~~~~~lp~ltekD~~DI~~a~~~gvd~I~ 285 (453)
-+++||.|.+-|| ....+|.+++++.+.+++..--...... .|.+ -..+|. .++-..-|+-+.+.|++-|.
T Consensus 36 Rl~~Gd~i~l~dg~G~~~~a~I~~~~~~~~~~~i~~~~~~~~e~~~~v~L---~~al~K-~~r~e~ilqkatELGV~~I~ 111 (268)
T 1vhk_A 36 RMNEGDQIICCSQDGFEAKCELQSVSKDKVSCLVIEWTNENRELPIKVYI---ASGLPK-GDKLEWIIQKGTELGAHAFI 111 (268)
T ss_dssp CCCTTCEEEEECTTSCEEEEEEEEECSSEEEEEEEEECCCCCCCSSEEEE---EEECCS-TTHHHHHHHHHHHTTCCEEE
T ss_pred cCCCCCEEEEEeCCCCEEEEEEEEecCCEEEEEEEEEeccCCCCCccEEE---EEeeec-CccHHHHHHHHHHhCcCEEE
Confidence 4689999998664 4566788888888888776421111111 1111 112232 23434456888999999764
Q ss_pred e
Q 012943 286 V 286 (453)
Q Consensus 286 l 286 (453)
.
T Consensus 112 p 112 (268)
T 1vhk_A 112 P 112 (268)
T ss_dssp E
T ss_pred E
Confidence 3
No 322
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=34.25 E-value=2.4e+02 Score=27.17 Aligned_cols=87 Identities=17% Similarity=0.088 Sum_probs=47.5
Q ss_pred cCEEEEeC-CCccccCCCCCHHHHHHHHHHHHHH---cCCCEEEEechhhhhccCCCCchHH-HHHHHHHHHhCccEEEe
Q 012943 331 SDGAMVAR-GDLGAELPIEDVPLLQEDIIRRCRS---MQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGADAVML 405 (453)
Q Consensus 331 sDgImIgR-GDLg~elg~e~v~~aqk~Ii~~c~~---aGkpvi~aTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~D~vmL 405 (453)
+||+++.- .-=+..+..+ -++++++.+.+ ...||+.- .+..+-.| +.-.-.+-..|+|++|+
T Consensus 50 v~gi~v~GttGE~~~Lt~~----Er~~v~~~~~~~~~grvpviaG---------vg~~~t~~ai~la~~a~~~Gadavlv 116 (304)
T 3l21_A 50 CDGLVVSGTTGESPTTTDG----EKIELLRAVLEAVGDRARVIAG---------AGTYDTAHSIRLAKACAAEGAHGLLV 116 (304)
T ss_dssp CSEEEESSTTTTGGGSCHH----HHHHHHHHHHHHHTTTSEEEEE---------CCCSCHHHHHHHHHHHHHHTCSEEEE
T ss_pred CCEEEeCccccchhhCCHH----HHHHHHHHHHHHhCCCCeEEEe---------CCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 78988841 1111122222 23344444333 23577764 33444455 45456667789999998
Q ss_pred cCcccCCCCHHHHHHHHHHHHHHHh
Q 012943 406 SGETAHGKFPLKAVKVMHTVALRTE 430 (453)
Q Consensus 406 s~ETA~G~yP~eaV~~m~~I~~~aE 430 (453)
..=--...-+-+.++..+.|+..+.
T Consensus 117 ~~P~y~~~s~~~l~~~f~~va~a~~ 141 (304)
T 3l21_A 117 VTPYYSKPPQRGLQAHFTAVADATE 141 (304)
T ss_dssp ECCCSSCCCHHHHHHHHHHHHTSCS
T ss_pred CCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 6322122235778888888877653
No 323
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=34.22 E-value=1.2e+02 Score=29.45 Aligned_cols=66 Identities=14% Similarity=0.185 Sum_probs=46.6
Q ss_pred HHHHHHHHhcCCCceEEEEecChhhhccHHHHHh-----------hcCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHc
Q 012943 296 HELKDYLKSCNADIHVIVKIESADSIPNLHSIIS-----------ASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSM 364 (453)
Q Consensus 296 ~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~-----------~sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~a 364 (453)
..+++.|.+.|.++.|.+--+.....+|+++++. ..|.|+-+- +-+..+..+-.+|.++
T Consensus 92 ~aa~~~L~~iNP~v~v~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~----------Dn~~~R~~in~~c~~~ 161 (292)
T 3h8v_A 92 QAAEHTLRNINPDVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCV----------DNFEARMTINTACNEL 161 (292)
T ss_dssp HHHHHHHHHHCTTSEEEEECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECC----------SSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCcEEEEecccCCcHHHHHHHhhhhcccccccCCCCCEEEECC----------cchhhhhHHHHHHHHh
Confidence 4566778888988888877666666677887763 356665431 2245677889999999
Q ss_pred CCCEEEE
Q 012943 365 QKPVIVA 371 (453)
Q Consensus 365 Gkpvi~a 371 (453)
++|.+.+
T Consensus 162 ~~Pli~~ 168 (292)
T 3h8v_A 162 GQTWMES 168 (292)
T ss_dssp TCCEEEE
T ss_pred CCCEEEe
Confidence 9998743
No 324
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=34.18 E-value=3.4e+02 Score=26.49 Aligned_cols=129 Identities=17% Similarity=0.193 Sum_probs=66.6
Q ss_pred CCCHhhHHHH--------HhhhhcCCcEEEecccc-------------C------------HHHHHHHHHHHHhcCCCce
Q 012943 264 SITDKDWEDI--------KFGVDNQVDFYAVSFVK-------------D------------AKVVHELKDYLKSCNADIH 310 (453)
Q Consensus 264 ~ltekD~~DI--------~~a~~~gvd~I~lSfV~-------------s------------a~dv~~v~~~L~~~~~~i~ 310 (453)
.||..|++.+ +.+.+.|+|+|=+.... . +.-+.++-+.+.+.= +..
T Consensus 133 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v-~~p 211 (340)
T 3gr7_A 133 EMTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVW-DGP 211 (340)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSC
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhc-CCc
Confidence 5788888777 22357899998765331 1 111222222333322 567
Q ss_pred EEEEecChh------hhccHHHHHhh-----cCEEEEeCCCcccc-CCCCCHHHHHHHHHHH-HHHcCCCEEEEechhhh
Q 012943 311 VIVKIESAD------SIPNLHSIISA-----SDGAMVARGDLGAE-LPIEDVPLLQEDIIRR-CRSMQKPVIVATNMLES 377 (453)
Q Consensus 311 IIakIET~~------gv~NldeI~~~-----sDgImIgRGDLg~e-lg~e~v~~aqk~Ii~~-c~~aGkpvi~aTqmLeS 377 (453)
|..||---+ .++...++++. +|.|-+--|.+.-. ++.. +..+..+++. .+..++|++..
T Consensus 212 v~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~--~~~~~~~~~~ik~~~~iPVi~~------ 283 (340)
T 3gr7_A 212 LFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVY--PGYQVPFAELIRREADIPTGAV------ 283 (340)
T ss_dssp EEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCC--TTTTHHHHHHHHHHTTCCEEEE------
T ss_pred eEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCC--ccccHHHHHHHHHHcCCcEEee------
Confidence 888884321 23444444443 68888754433211 1110 0011222222 23358998874
Q ss_pred hccCCCCchHHHHHHHHHHHhC-ccEEEecC
Q 012943 378 MIDHPTPTRAEVSDIAIAVREG-ADAVMLSG 407 (453)
Q Consensus 378 M~~~~~PtrAEv~Dv~nav~~G-~D~vmLs~ 407 (453)
...-+. .++..++..| +|.|++..
T Consensus 284 ---GgI~s~---e~a~~~L~~G~aD~V~iGR 308 (340)
T 3gr7_A 284 ---GLITSG---WQAEEILQNGRADLVFLGR 308 (340)
T ss_dssp ---SSCCCH---HHHHHHHHTTSCSEEEECH
T ss_pred ---CCCCCH---HHHHHHHHCCCeeEEEecH
Confidence 222232 2344778888 99999963
No 325
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=34.13 E-value=80 Score=28.97 Aligned_cols=68 Identities=4% Similarity=-0.037 Sum_probs=40.4
Q ss_pred hHHHHHhhhhcCCcEEEeccc-cCHHHH--HHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh--cCEEEEe
Q 012943 269 DWEDIKFGVDNQVDFYAVSFV-KDAKVV--HELKDYLKSCNADIHVIVKIESADSIPNLHSIISA--SDGAMVA 337 (453)
Q Consensus 269 D~~DI~~a~~~gvd~I~lSfV-~sa~dv--~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~--sDgImIg 337 (453)
+.+|+..+.+.|+|++++-|. .|+..| ..++++.......+..+.-.-+. ..+.+.+|+.. .|.+-+-
T Consensus 10 ~~eda~~a~~~GaD~iGfif~~~SpR~V~~~~a~~i~~~~~~~~~~VgVfvn~-~~~~i~~~~~~~~ld~vQLH 82 (203)
T 1v5x_A 10 RLEDALLAEALGAFALGFVLAPGSRRRIAPEAARAIGEALGPFVVRVGVFRDQ-PPEEVLRLMEEARLQVAQLH 82 (203)
T ss_dssp CHHHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHSCSSSEEEEEESSC-CHHHHHHHHHHTTCSEEEEC
T ss_pred cHHHHHHHHHcCCCEEEEEecCCCCCcCCHHHHHHHHHhCCCCCCEEEEEeCC-CHHHHHHHHHhhCCCEEEEC
Confidence 457788888899999888864 455544 44555555444444444333222 24455555554 5787774
No 326
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=34.08 E-value=3.2e+02 Score=26.15 Aligned_cols=129 Identities=16% Similarity=0.048 Sum_probs=67.1
Q ss_pred eecCCCccCCCCCCHhhHHHHHhhhhcCC-cEEEeccccCHHHHHHHHHHHHhc-CCCceEEEEec----ChhhhccHHH
Q 012943 253 LNVRGKSANLPSITDKDWEDIKFGVDNQV-DFYAVSFVKDAKVVHELKDYLKSC-NADIHVIVKIE----SADSIPNLHS 326 (453)
Q Consensus 253 Vnlp~~~~~lp~ltekD~~DI~~a~~~gv-d~I~lSfV~sa~dv~~v~~~L~~~-~~~i~IIakIE----T~~gv~Nlde 326 (453)
+..|=..-++..+|. .+....+...|. .++......+++++.+.-+.+.+. +....+=..+. .+.-.+.++.
T Consensus 14 ~~~Pii~apM~gvs~--~~la~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~~~~~~~~~~~~ 91 (328)
T 2gjl_A 14 VEHPIMQGGMQWVGR--AEMAAAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPTQKPVPYAEYRAA 91 (328)
T ss_dssp CSSSEEECCCTTTCS--HHHHHHHHHTTSBCEEETTTSSSHHHHHHHHHHHHHHCSSCCEEEEEECCCSSCCCHHHHHHH
T ss_pred CCCCEEECCCCCCCc--HHHHHHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEeccccccCccHHHHHHH
Confidence 334433333434453 344555556664 444333444577765443334332 22222222232 2222233444
Q ss_pred HHhh-cCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEe
Q 012943 327 IISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVML 405 (453)
Q Consensus 327 I~~~-sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmL 405 (453)
+++. +|+|.++-|+ + ..+++.++++|++++... .+ ..+...+...|+|++.+
T Consensus 92 ~~~~g~d~V~~~~g~-----p--------~~~~~~l~~~gi~vi~~v-----------~t---~~~a~~~~~~GaD~i~v 144 (328)
T 2gjl_A 92 IIEAGIRVVETAGND-----P--------GEHIAEFRRHGVKVIHKC-----------TA---VRHALKAERLGVDAVSI 144 (328)
T ss_dssp HHHTTCCEEEEEESC-----C--------HHHHHHHHHTTCEEEEEE-----------SS---HHHHHHHHHTTCSEEEE
T ss_pred HHhcCCCEEEEcCCC-----c--------HHHHHHHHHcCCCEEeeC-----------CC---HHHHHHHHHcCCCEEEE
Confidence 4444 7999987442 1 356677788899988521 22 23345678899999999
Q ss_pred cCccc
Q 012943 406 SGETA 410 (453)
Q Consensus 406 s~ETA 410 (453)
.+=++
T Consensus 145 ~g~~~ 149 (328)
T 2gjl_A 145 DGFEC 149 (328)
T ss_dssp ECTTC
T ss_pred ECCCC
Confidence 65333
No 327
>2dpr_A CON-T(K7GLA); conantoxin, nmdar antagonist, GLA-containing, metal B protein; HET: CGU; 1.70A {Synthetic} PDB: 1ont_A*
Probab=33.98 E-value=29 Score=21.30 Aligned_cols=17 Identities=12% Similarity=0.227 Sum_probs=13.8
Q ss_pred hHHHHHHHHHHHHHHhh
Q 012943 137 HASHQKTIDLVKEYNSQ 153 (453)
Q Consensus 137 ~e~~~~~I~~iR~a~~~ 153 (453)
.++.+++++|+|+++-+
T Consensus 2 eeeyqemlenlreaevk 18 (26)
T 2dpr_A 2 EEEYQEMLENLREAEVK 18 (26)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHH
Confidence 36789999999998644
No 328
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=33.94 E-value=2.6e+02 Score=27.56 Aligned_cols=153 Identities=11% Similarity=0.159 Sum_probs=0.0
Q ss_pred eec-CCCccCCCCCCHhhH-HHHHhhhhcCCcEEEec-------------cccCHHHHHHHHHHHHhcCCCceEEEEecC
Q 012943 253 LNV-RGKSANLPSITDKDW-EDIKFGVDNQVDFYAVS-------------FVKDAKVVHELKDYLKSCNADIHVIVKIES 317 (453)
Q Consensus 253 Vnl-p~~~~~lp~ltekD~-~DI~~a~~~gvd~I~lS-------------fV~sa~dv~~v~~~L~~~~~~i~IIakIET 317 (453)
+|+ |+.-.+ ...+.... +.....++.|+|+|=+. .|...+++..+...++.......+..-|.|
T Consensus 34 lNvTpDSFsd-~~~~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~~vpISIDT 112 (314)
T 3tr9_A 34 INVSPNSFYH-PHLDLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRFPQLISVDT 112 (314)
T ss_dssp EECSTTCSBC-BCCSHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHCCSEEEEEC
T ss_pred EeCCCCchhh-ccCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhCCCeEEEeC
Q ss_pred hhhhccHHHHHhhcCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCc------------
Q 012943 318 ADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPT------------ 385 (453)
Q Consensus 318 ~~gv~NldeI~~~sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~Pt------------ 385 (453)
..+----..+-+ -.|+-.++.....+ .++..+.++|.|+++ |-..+.|.
T Consensus 113 ~~~~Va~aAl~a--------Ga~iINDVsg~~~~----~m~~v~a~~g~~vVl-------Mh~~G~P~tmq~~~~ydvv~ 173 (314)
T 3tr9_A 113 SRPRVMREAVNT--------GADMINDQRALQLD----DALTTVSALKTPVCL-------MHFPSETRKPGSTTHFYFLQ 173 (314)
T ss_dssp SCHHHHHHHHHH--------TCCEEEETTTTCST----THHHHHHHHTCCEEE-------ECCCCTTCCTTSSCHHHHHH
T ss_pred CCHHHHHHHHHc--------CCCEEEECCCCCch----HHHHHHHHhCCeEEE-------ECCCCCCcccccccccchHH
Q ss_pred --hHH-HHHHHHHHHhCcc--EEEecCccc---CCCCHHHHHHHHHHH
Q 012943 386 --RAE-VSDIAIAVREGAD--AVMLSGETA---HGKFPLKAVKVMHTV 425 (453)
Q Consensus 386 --rAE-v~Dv~nav~~G~D--~vmLs~ETA---~G~yP~eaV~~m~~I 425 (453)
.+. ..-+..+...|.+ -++|---.- .||-+.+..++|+++
T Consensus 174 ev~~~l~~~i~~a~~~GI~~~~IilDPG~G~~~F~Kt~~~n~~lL~~l 221 (314)
T 3tr9_A 174 SVKKELQESIQRCKKAGISEDRIIIDPGFGQGNYGKNVSENFYLLNKL 221 (314)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEEEECCCCSGGGCCCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHhHEEEeCCCCchhhcCCHHHHHHHHHHH
No 329
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=33.91 E-value=2.5e+02 Score=31.04 Aligned_cols=102 Identities=16% Similarity=0.138 Sum_probs=70.2
Q ss_pred CHhhHHHHHhhhhcCCcEEEe-------------------ccccC--HHHHHHHHHHHHhcCCCceEEEEecChhhhcc-
Q 012943 266 TDKDWEDIKFGVDNQVDFYAV-------------------SFVKD--AKVVHELKDYLKSCNADIHVIVKIESADSIPN- 323 (453)
Q Consensus 266 tekD~~DI~~a~~~gvd~I~l-------------------SfV~s--a~dv~~v~~~L~~~~~~i~IIakIET~~gv~N- 323 (453)
++.-++-|+||.++|.++|.+ .|+.- --|+.++.+|-.+. .+.||.-.||..++.|
T Consensus 370 te~~K~YIDFAA~~G~eyvLveGwD~GW~~~~~~~~~~~fd~~~p~pd~Dl~eL~~YA~sK--GV~iilw~~t~~~~~n~ 447 (738)
T 2d73_A 370 TANVKRYIDFAAAHGFDAVLVEGWNEGWEDWFGNSKDYVFDFVTPYPDFDVKEIHRYAARK--GIKMMMHHETSASVRNY 447 (738)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECSCBTTGGGCSSSCCSSCCCSSCBCTTCCHHHHHHHHHHT--TCEEEEEEECTTBHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeccCCcccccCccccccccccccCCCCCHHHHHHHHHhC--CCEEEEEEcCCCchhhH
Confidence 455578999999999999998 12111 12488888888764 6889999999986554
Q ss_pred ---HHHHHhh-----cCEEEEeC-CCccccCCC----CCHHHHHHHHHHHHHHcCCCEEE
Q 012943 324 ---LHSIISA-----SDGAMVAR-GDLGAELPI----EDVPLLQEDIIRRCRSMQKPVIV 370 (453)
Q Consensus 324 ---ldeI~~~-----sDgImIgR-GDLg~elg~----e~v~~aqk~Ii~~c~~aGkpvi~ 370 (453)
+++.++. ..||-++= ||+ ++-+- ...-....++++.|.+++.-|..
T Consensus 448 e~~~d~~f~~~~~~Gv~GVKvdF~g~~-~~r~~~h~~Q~~v~~Y~~i~~~AA~~~LmVnf 506 (738)
T 2d73_A 448 ERHMDKAYQFMADNGYNSVKSGYVGNI-IPRGEHHYGQWMNNHYLYAVKKAADYKIMVNA 506 (738)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCSSC-BSTTCCTTSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEeCccccC-cCCcccccchHHHHHHHHHHHHHHHcCcEEEc
Confidence 4445443 57888763 221 11111 23566679999999999998887
No 330
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=33.73 E-value=3.7e+02 Score=26.76 Aligned_cols=110 Identities=16% Similarity=0.197 Sum_probs=71.3
Q ss_pred HHHHhhhhcCCcEEEecc--cc---------CHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhhcCEEEEeCC
Q 012943 271 EDIKFGVDNQVDFYAVSF--VK---------DAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARG 339 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lSf--V~---------sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~sDgImIgRG 339 (453)
+-++.+.+.|+|++-.-+ .+ ..+.+..++++..+. .+.+++-+-.+..++-+.+ ..|.+-||.+
T Consensus 124 ~~a~~~k~aGa~~vr~q~fKprTs~~~f~glg~egl~~l~~~~~e~--Gl~~~te~~d~~~~~~l~~---~vd~lkIgAr 198 (350)
T 1vr6_A 124 ETAHFLSELGVKVLRGGAYKPRTSPYSFQGLGEKGLEYLREAADKY--GMYVVTEALGEDDLPKVAE---YADIIQIGAR 198 (350)
T ss_dssp HHHHHHHHTTCCEEECBSCCCCCSTTSCCCCTHHHHHHHHHHHHHH--TCEEEEECSSGGGHHHHHH---HCSEEEECGG
T ss_pred HHHHHHHHcCCCeeeeeEEeCCCChHhhcCCCHHHHHHHHHHHHHc--CCcEEEEeCCHHHHHHHHH---hCCEEEECcc
Confidence 344555678888763311 11 246777788887664 5678887777777765555 4899999866
Q ss_pred CccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCC-CchHHHHHHHHHHH-hCccEEEe
Q 012943 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPT-PTRAEVSDIAIAVR-EGADAVML 405 (453)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~-PtrAEv~Dv~nav~-~G~D~vmL 405 (453)
++- . ..+++++.+.||||++. ++. .|..|+...++++. .|.+-++|
T Consensus 199 ~~~------n-----~~LL~~va~~~kPVilk---------~G~~~tl~ei~~Ave~i~~~GN~~viL 246 (350)
T 1vr6_A 199 NAQ------N-----FRLLSKAGSYNKPVLLK---------RGFMNTIEEFLLSAEYIANSGNTKIIL 246 (350)
T ss_dssp GTT------C-----HHHHHHHHTTCSCEEEE---------CCTTCCHHHHHHHHHHHHHTTCCCEEE
T ss_pred ccc------C-----HHHHHHHHccCCcEEEc---------CCCCCCHHHHHHHHHHHHHCCCCeEEE
Confidence 552 2 22344455789999995 444 47788888887665 46544444
No 331
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=33.42 E-value=38 Score=34.10 Aligned_cols=46 Identities=13% Similarity=0.243 Sum_probs=36.1
Q ss_pred EecCCCCCCHHHHHHHHHhCCcEEEeecCCCChHHHHHHHHHHHHH
Q 012943 105 CTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEY 150 (453)
Q Consensus 105 ~TiGPss~s~e~i~~Li~aGmnvaRiNfSHg~~e~~~~~I~~iR~a 150 (453)
+.+|-.....+.++.++++|+++.=++.+||..+...+.|+.+|+.
T Consensus 93 ~~~g~~~~~~e~~~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~ 138 (361)
T 3r2g_A 93 VSVGCTENELQRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQL 138 (361)
T ss_dssp EEECSSHHHHHHHHHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHH
T ss_pred EEcCCCHHHHHHHHHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHh
Confidence 3345334567889999999999999999999887766777777764
No 332
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=33.21 E-value=2e+02 Score=28.00 Aligned_cols=102 Identities=21% Similarity=0.309 Sum_probs=57.8
Q ss_pred CHHHHHHHHHHHHhcCCCceEEEEe--cChhhhccHHHHHhh-cCEEEEeCCCccccCCCCCHHHHHHHHHHHHHH--cC
Q 012943 291 DAKVVHELKDYLKSCNADIHVIVKI--ESADSIPNLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRS--MQ 365 (453)
Q Consensus 291 sa~dv~~v~~~L~~~~~~i~IIakI--ET~~gv~NldeI~~~-sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~--aG 365 (453)
+.+++.++++.+ .+++++|. -. ++..+.+.++ +|+| |.+..+..++ ++..+++ .|
T Consensus 66 ~~~~i~~i~~~v-----~iPvl~k~~i~~---ide~qil~aaGAD~I-----d~s~~~~~~~-------li~~i~~~~~g 125 (297)
T 4adt_A 66 DPLKIEEIRKCI-----SINVLAKVRIGH---FVEAQILEELKVDML-----DESEVLTMAD-------EYNHINKHKFK 125 (297)
T ss_dssp CHHHHHHHHTTC-----CSEEEEEEETTC---HHHHHHHHHTTCSEE-----EEETTSCCSC-------SSCCCCGGGCS
T ss_pred CHHHHHHHHHhc-----CCCEEEeccCCc---HHHHHHHHHcCCCEE-----EcCCCCCHHH-------HHHHHHhcCCC
Confidence 677777666543 68999874 22 3333333333 7998 3222222222 2222333 57
Q ss_pred CCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccCCCCHHHHHHHHHHHHH
Q 012943 366 KPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVAL 427 (453)
Q Consensus 366 kpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~ 427 (453)
.++++- ..+..| .-.++..|+|.|-..+.--.| .-+++|++++.+..
T Consensus 126 ~~vvv~-----------v~~~~E---a~~a~~~Gad~I~v~g~~gTG-~~~~~v~h~~~~~~ 172 (297)
T 4adt_A 126 TPFVCG-----------CTNLGE---ALRRISEGASMIRTKGEAGTG-NIIEAIKHIRTVNN 172 (297)
T ss_dssp SCEEEE-----------ESSHHH---HHHHHHHTCSEEEECCCTTSC-CCHHHHHHHHHHHH
T ss_pred CeEEEE-----------eCCHHH---HHHHHhCCCCEEEECCCcCCC-chHHHHHHHHHhhh
Confidence 777652 133333 456778899999887651122 34899999988753
No 333
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=33.14 E-value=80 Score=29.34 Aligned_cols=103 Identities=14% Similarity=0.151 Sum_probs=62.5
Q ss_pred cEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh--cCEEEEeCCCccccCCCCCHHHHHHHHHH
Q 012943 282 DFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA--SDGAMVARGDLGAELPIEDVPLLQEDIIR 359 (453)
Q Consensus 282 d~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~--sDgImIgRGDLg~elg~e~v~~aqk~Ii~ 359 (453)
+.+..|| +.+.+..+++. ..++++....+... .+..+.+.. .+++-..- ..+-+..++
T Consensus 145 ~vii~SF--~~~~l~~~~~~----~p~~~~~~l~~~~~--~~~~~~~~~~~~~~i~~~~------------~~~~~~~v~ 204 (252)
T 3qvq_A 145 PLLFSSF--NYFALVSAKAL----WPEIARGYNVSAIP--SAWQERLEHLDCAGLHIHQ------------SFFDVQQVS 204 (252)
T ss_dssp CEEEEES--CHHHHHHHHHH----CTTSCEEEECSSCC--TTHHHHHHHHTCSEEEEEG------------GGCCHHHHH
T ss_pred CEEEEeC--CHHHHHHHHHH----CCCCcEEEEEecCc--hhHHHHHHHcCCeEEecch------------hhCCHHHHH
Confidence 4677787 56666665553 34555555444321 223334433 34443321 122357889
Q ss_pred HHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccCCCCHHHHHHHHHH
Q 012943 360 RCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHT 424 (453)
Q Consensus 360 ~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~ 424 (453)
.++++|++|.+-|- . +..+...++..|+|+|+- .||-.+.+++++
T Consensus 205 ~~~~~G~~v~~WTv--------n-----~~~~~~~l~~~GVdgIiT-------D~P~~~~~~l~~ 249 (252)
T 3qvq_A 205 DIKAAGYKVLAFTI--------N-----DESLALKLYNQGLDAVFS-------DYPQKIQSAIDS 249 (252)
T ss_dssp HHHHTTCEEEEECC--------C-----CHHHHHHHHHTTCCEEEE-------SSHHHHHHHHHH
T ss_pred HHHHCCCEEEEEcC--------C-----CHHHHHHHHHcCCCEEEe-------CCHHHHHHHHHH
Confidence 99999999988651 1 233566888899999987 589888777653
No 334
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=33.04 E-value=1.7e+02 Score=29.16 Aligned_cols=94 Identities=23% Similarity=0.279 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh-cCEEEEeC-CCccccCCCCCHHHHHHHHHHHHHHcCCCEE
Q 012943 292 AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVAR-GDLGAELPIEDVPLLQEDIIRRCRSMQKPVI 369 (453)
Q Consensus 292 a~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~-sDgImIgR-GDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi 369 (453)
.+.+..+++.. +++|++|. ....+.+....++ +|+|.++- |--..+.+...+ .+..++ ....+.|+|
T Consensus 214 ~~~i~~i~~~~-----~~Pv~vkg--v~t~e~a~~a~~aGad~I~vs~~gg~~~d~~~~~~-~~l~~v---~~~~~~pVi 282 (380)
T 1p4c_A 214 WEALRWLRDLW-----PHKLLVKG--LLSAEDADRCIAEGADGVILSNHGGRQLDCAISPM-EVLAQS---VAKTGKPVL 282 (380)
T ss_dssp HHHHHHHHHHC-----CSEEEEEE--ECCHHHHHHHHHTTCSEEEECCGGGTSCTTCCCGG-GTHHHH---HHHHCSCEE
T ss_pred HHHHHHHHHhc-----CCCEEEEe--cCcHHHHHHHHHcCCCEEEEcCCCCCcCCCCcCHH-HHHHHH---HHHcCCeEE
Confidence 44555555433 46777762 1122222333333 79999841 111111222221 111222 223456887
Q ss_pred EEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCc
Q 012943 370 VATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGE 408 (453)
Q Consensus 370 ~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~E 408 (453)
.. .+.-+ ..|+..++..|+|+|++..-
T Consensus 283 a~---------GGI~~---~~dv~kal~~GAdaV~iGr~ 309 (380)
T 1p4c_A 283 ID---------SGFRR---GSDIVKALALGAEAVLLGRA 309 (380)
T ss_dssp EC---------SSCCS---HHHHHHHHHTTCSCEEESHH
T ss_pred EE---------CCCCC---HHHHHHHHHhCCcHhhehHH
Confidence 63 33333 46788999999999999754
No 335
>2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A*
Probab=32.91 E-value=49 Score=32.58 Aligned_cols=54 Identities=20% Similarity=0.357 Sum_probs=33.7
Q ss_pred CCHHHHHHHHHhCCcEEEeecCCCC---h-------HHHHHHHHHHHHHHhhcCCCcEEEEeecCCC
Q 012943 112 SSREMIWKLAEEGMNVARLNMSHGD---H-------ASHQKTIDLVKEYNSQFEDKAVAIMLDTKGP 168 (453)
Q Consensus 112 ~s~e~i~~Li~aGmnvaRiNfSHg~---~-------e~~~~~I~~iR~a~~~~~~~~iaIllDLkGP 168 (453)
...+.++.|-+.|+|++||-++... + +.+.+.++.+=+...+ +-+.+++|+-..
T Consensus 70 ~~~~d~~~l~~~G~n~vRl~i~w~~~~~~~~~~~~~~~~l~~~d~~v~~a~~---~Gi~vild~h~~ 133 (395)
T 2jep_A 70 VTPELIKKVKAAGFKSIRIPVSYLNNIGSAPNYTINAAWLNRIQQVVDYAYN---EGLYVIINIHGD 133 (395)
T ss_dssp CCHHHHHHHHHTTCCEEEECCCCGGGBCCTTTCCBCHHHHHHHHHHHHHHHT---TTCEEEECCCGG
T ss_pred CcHHHHHHHHHcCCCEEEEeeeeccccCCCCCCccCHHHHHHHHHHHHHHHH---CCCEEEEECCCc
Confidence 3678899999999999999876421 1 1222223322222333 447888998764
No 336
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=32.85 E-value=1.8e+02 Score=27.91 Aligned_cols=89 Identities=18% Similarity=0.145 Sum_probs=47.0
Q ss_pred cCEEEEeCCCc--cccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHH-HHHHHHHHHhCccEEEecC
Q 012943 331 SDGAMVARGDL--GAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGADAVMLSG 407 (453)
Q Consensus 331 sDgImIgRGDL--g~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~D~vmLs~ 407 (453)
+||+++. |=- +..+..++-..+.+.+++.++ ...||+.- .+..+-.| +.-.-.+-..|+|++|+..
T Consensus 35 v~gi~v~-GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaG---------vg~~~t~~ai~la~~A~~~Gadavlv~~ 103 (297)
T 2rfg_A 35 AHGLVPV-GTTGESPTLTEEEHKRVVALVAEQAQ-GRVPVIAG---------AGSNNPVEAVRYAQHAQQAGADAVLCVA 103 (297)
T ss_dssp CSEEECS-SGGGTGGGSCHHHHHHHHHHHHHHHT-TSSCBEEE---------CCCSSHHHHHHHHHHHHHHTCSEEEECC
T ss_pred CCEEEEC-ccccchhhCCHHHHHHHHHHHHHHhC-CCCeEEEc---------cCCCCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 7898874 111 111222222223333333332 23677764 33444445 4445556667999999863
Q ss_pred cccCCCCHHHHHHHHHHHHHHHh
Q 012943 408 ETAHGKFPLKAVKVMHTVALRTE 430 (453)
Q Consensus 408 ETA~G~yP~eaV~~m~~I~~~aE 430 (453)
=--...=+-+.++..+.|+..+.
T Consensus 104 P~y~~~s~~~l~~~f~~va~a~~ 126 (297)
T 2rfg_A 104 GYYNRPSQEGLYQHFKMVHDAID 126 (297)
T ss_dssp CTTTCCCHHHHHHHHHHHHHHCS
T ss_pred CCCCCCCHHHHHHHHHHHHHhcC
Confidence 22122334677888888887664
No 337
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=32.79 E-value=1.6e+02 Score=28.16 Aligned_cols=86 Identities=10% Similarity=0.085 Sum_probs=47.4
Q ss_pred cCEEEEeC-CCccccCCCCCHHHHHHHHHHHHHHc---CCCEEEEechhhhhccCCCCchHH-HHHHHHHHHhCccEEEe
Q 012943 331 SDGAMVAR-GDLGAELPIEDVPLLQEDIIRRCRSM---QKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGADAVML 405 (453)
Q Consensus 331 sDgImIgR-GDLg~elg~e~v~~aqk~Ii~~c~~a---Gkpvi~aTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~D~vmL 405 (453)
+||+++.- .-=+..+. ..-++++++.+.++ ..||+.-| +..+-.| +.-.-.+-..|+|++|+
T Consensus 38 v~gl~~~GttGE~~~Ls----~~Er~~v~~~~~~~~~gr~pviaGv---------g~~~t~~ai~la~~A~~~Gadavlv 104 (294)
T 3b4u_A 38 CDSVTLFGTTGEGCSVG----SRERQAILSSFIAAGIAPSRIVTGV---------LVDSIEDAADQSAEALNAGARNILL 104 (294)
T ss_dssp CSEEEESSTTTTGGGSC----HHHHHHHHHHHHHTTCCGGGEEEEE---------CCSSHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCEEEECccccChhhCC----HHHHHHHHHHHHHHhCCCCcEEEeC---------CCccHHHHHHHHHHHHhcCCCEEEE
Confidence 78988741 00111111 22344555555443 25676642 3334444 44455566679999998
Q ss_pred cCcccCC-CCHHHHHHHHHHHHHHH
Q 012943 406 SGETAHG-KFPLKAVKVMHTVALRT 429 (453)
Q Consensus 406 s~ETA~G-~yP~eaV~~m~~I~~~a 429 (453)
..=--.. .-+-+.++..+.|+..+
T Consensus 105 ~~P~y~~~~s~~~l~~~f~~va~a~ 129 (294)
T 3b4u_A 105 APPSYFKNVSDDGLFAWFSAVFSKI 129 (294)
T ss_dssp CCCCSSCSCCHHHHHHHHHHHHHHH
T ss_pred cCCcCCCCCCHHHHHHHHHHHHHhc
Confidence 6322222 24567788889998877
No 338
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=32.75 E-value=3.3e+02 Score=25.94 Aligned_cols=140 Identities=15% Similarity=0.091 Sum_probs=79.0
Q ss_pred HHHHhhhhcCCcEEEe-----ccccCHHHHHHHHHHHHhcCCCceEEEEecChh--hh-----ccHHHHHhh------cC
Q 012943 271 EDIKFGVDNQVDFYAV-----SFVKDAKVVHELKDYLKSCNADIHVIVKIESAD--SI-----PNLHSIISA------SD 332 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~l-----SfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~--gv-----~NldeI~~~------sD 332 (453)
++++.+...|+|.|=+ ......+++.++-..+.+.-..++||.-+-|.. |- +.--+++.. +|
T Consensus 56 ~~~~~~~~~gaD~VElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~~~~~~~~ll~~~l~~g~~d 135 (276)
T 3o1n_A 56 SEALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKPLLFTFRSAKEGGEQALTTGQYIDLNRAAVDSGLVD 135 (276)
T ss_dssp HHHHHHTTSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCCSSCEEEECCBGGGTCSBCCCHHHHHHHHHHHHHHTCCS
T ss_pred HHHHHHhhCCCCEEEEEeccccccCcHHHHHHHHHHHHHhcCCCCEEEEEEEhhhCCCCCCCHHHHHHHHHHHHhcCCCC
Confidence 4444444467776543 222334556555555555444678888776532 11 111122221 34
Q ss_pred EEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHH-HHHHHhCccEEEecCcccC
Q 012943 333 GAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDI-AIAVREGADAVMLSGETAH 411 (453)
Q Consensus 333 gImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv-~nav~~G~D~vmLs~ETA~ 411 (453)
.|=| |+..+ ....++++..+++.|..+|.+-+- ....|+..|+... ..+...|+|.+=+. ..
T Consensus 136 yIDv-------El~~~--~~~~~~l~~~a~~~~~kvI~S~Hd-----f~~tP~~~el~~~~~~~~~~GaDIvKia---~~ 198 (276)
T 3o1n_A 136 MIDL-------ELFTG--DDEVKATVGYAHQHNVAVIMSNHD-----FHKTPAAEEIVQRLRKMQELGADIPKIA---VM 198 (276)
T ss_dssp EEEE-------EGGGC--HHHHHHHHHHHHHTTCEEEEEEEE-----SSCCCCHHHHHHHHHHHHHTTCSEEEEE---EC
T ss_pred EEEE-------ECcCC--HHHHHHHHHHHHhCCCEEEEEeec-----CCCCcCHHHHHHHHHHHHHcCCCEEEEE---ec
Confidence 4433 33222 356788899999999999986442 2346777775554 55667899988774 23
Q ss_pred CCCHHHHHHHHHHHHH
Q 012943 412 GKFPLKAVKVMHTVAL 427 (453)
Q Consensus 412 G~yP~eaV~~m~~I~~ 427 (453)
-+-+.+..+.++-...
T Consensus 199 a~s~~Dvl~Ll~~~~~ 214 (276)
T 3o1n_A 199 PQTKADVLTLLTATVE 214 (276)
T ss_dssp CSSHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHH
Confidence 4445666666654433
No 339
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=32.75 E-value=66 Score=33.77 Aligned_cols=68 Identities=19% Similarity=0.163 Sum_probs=41.9
Q ss_pred HHHHHhhhhcCCcEEEecccc---------CHHHHHHHHHHHHhc--CCCceEEEEecChhhhccHHHHHhh----cCEE
Q 012943 270 WEDIKFGVDNQVDFYAVSFVK---------DAKVVHELKDYLKSC--NADIHVIVKIESADSIPNLHSIISA----SDGA 334 (453)
Q Consensus 270 ~~DI~~a~~~gvd~I~lSfV~---------sa~dv~~v~~~L~~~--~~~i~IIakIET~~gv~NldeI~~~----sDgI 334 (453)
.++.+.+.+.|+|+|.+|--. +.+-+.++++.+.+. ..++.||+ --||.+-.+++++ +|++
T Consensus 354 ~e~A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v~~~~~~~~ipVia----~GGI~~g~Dv~kaLalGAdaV 429 (511)
T 1kbi_A 354 TEDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFV----DGGVRRGTDVLKALCLGAKGV 429 (511)
T ss_dssp HHHHHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBEEEE----ESSCCSHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHHHhhccCCCcEEEE----ECCCCCHHHHHHHHHcCCCEE
Confidence 355677788999999995311 112334455555432 34688887 2455555555554 8999
Q ss_pred EEeCCCc
Q 012943 335 MVARGDL 341 (453)
Q Consensus 335 mIgRGDL 341 (453)
+|||.=|
T Consensus 430 ~iGr~~l 436 (511)
T 1kbi_A 430 GLGRPFL 436 (511)
T ss_dssp EECHHHH
T ss_pred EECHHHH
Confidence 9999544
No 340
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=32.48 E-value=1.6e+02 Score=28.35 Aligned_cols=56 Identities=20% Similarity=0.178 Sum_probs=32.1
Q ss_pred CCCEEEEechhhhhccCCCCchHH-HHHHHHHHHhCccEEEecCcccCCCCHHHHHHHHHHHHHHH
Q 012943 365 QKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRT 429 (453)
Q Consensus 365 Gkpvi~aTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~a 429 (453)
..||+.- .+..+-.| +.-.-.+-..|+|++|+..=--...-+-+.++..+.|+..+
T Consensus 81 rvpViaG---------vg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~ 137 (306)
T 1o5k_A 81 KIPVIVG---------AGTNSTEKTLKLVKQAEKLGANGVLVVTPYYNKPTQEGLYQHYKYISERT 137 (306)
T ss_dssp SSCEEEE---------CCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTTC
T ss_pred CCeEEEc---------CCCccHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhC
Confidence 3677764 33344445 44445566679999988532212223466777787776544
No 341
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=32.41 E-value=1.5e+02 Score=27.49 Aligned_cols=65 Identities=15% Similarity=0.238 Sum_probs=44.3
Q ss_pred HHHHHHHHhcCCCceEEEEecChhhhccHHHHHhhcCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 012943 296 HELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (453)
Q Consensus 296 ~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~a 371 (453)
..+++.+.+.+..+.+.+.-+... -+|+++++...|.|+.+-.+ +.....+...|++.|+|.+.+
T Consensus 88 ~~~~~~l~~~np~~~v~~~~~~~~-~~~~~~~~~~~DvVi~~~d~----------~~~~~~l~~~~~~~~~p~i~~ 152 (249)
T 1jw9_B 88 ESARDALTRINPHIAITPVNALLD-DAELAALIAEHDLVLDCTDN----------VAVRNQLNAGCFAAKVPLVSG 152 (249)
T ss_dssp HHHHHHHHHHCTTSEEEEECSCCC-HHHHHHHHHTSSEEEECCSS----------HHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHCCCcEEEEEeccCC-HhHHHHHHhCCCEEEEeCCC----------HHHHHHHHHHHHHcCCCEEEe
Confidence 445566777677766554333332 25778888888988876322 346778888999999998765
No 342
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=32.38 E-value=52 Score=31.01 Aligned_cols=52 Identities=25% Similarity=0.351 Sum_probs=32.5
Q ss_pred CHHHHHHHHHhCCcEEEeecCCC---ChHHHHHHHHHHHHHHhhcCCCcEEEEeecCCC
Q 012943 113 SREMIWKLAEEGMNVARLNMSHG---DHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGP 168 (453)
Q Consensus 113 s~e~i~~Li~aGmnvaRiNfSHg---~~e~~~~~I~~iR~a~~~~~~~~iaIllDLkGP 168 (453)
..+.++.|-+.|+|++|+-++.| ..+..+ .++.+=+...+.+ +.+++|+-+.
T Consensus 33 ~~~~~~~i~~~G~N~VRi~~~~~~~~~~~~~~-~ld~~v~~a~~~G---i~Vild~H~~ 87 (294)
T 2whl_A 33 ASTAIPAIAEQGANTIRIVLSDGGQWEKDDID-TIREVIELAEQNK---MVAVVEVHDA 87 (294)
T ss_dssp HHHHHHHHHHTTCSEEEEEECCSSSSCCCCHH-HHHHHHHHHHTTT---CEEEEEECTT
T ss_pred hHHHHHHHHHcCCCEEEEEecCCCccCccHHH-HHHHHHHHHHHCC---CEEEEEeccC
Confidence 45689999999999999987644 112222 2333333333444 7788898654
No 343
>2jpp_A Translational repressor; RNA recognition, protein/RNA, CSRA, RSMA, shine-dalgarno; NMR {Pseudomonas fluorescens}
Probab=32.14 E-value=64 Score=25.10 Aligned_cols=29 Identities=10% Similarity=0.203 Sum_probs=23.8
Q ss_pred ccccCCEEEEeCCeeEEEEEEEeCCeEEEE
Q 012943 211 DVEVGDILLVDGGMMSLAVKSKTKDLVKCI 240 (453)
Q Consensus 211 ~vk~Gd~IlIDDG~I~L~V~ev~~~~v~~~ 240 (453)
.-++|..|.|+| .|..+|.++.++.|+.-
T Consensus 5 tRk~GEsI~IGd-~I~ItVl~v~g~~VrLG 33 (70)
T 2jpp_A 5 TRKVGESINIGD-DITITILGVSGQQVRIG 33 (70)
T ss_dssp EEETTCEEEETT-TEEEEEEEEETTEEEEE
T ss_pred EccCCCeEEECC-CEEEEEEEEeCCEEEEE
Confidence 347899999987 79999999988887654
No 344
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=32.12 E-value=1.5e+02 Score=26.75 Aligned_cols=148 Identities=11% Similarity=0.063 Sum_probs=82.3
Q ss_pred HHHHhhhhcCCcEEEecccc-CHHHHHHHHHHHHhcCCCceEEE---EecCh------hhhccHHHHHhh-----cCEEE
Q 012943 271 EDIKFGVDNQVDFYAVSFVK-DAKVVHELKDYLKSCNADIHVIV---KIESA------DSIPNLHSIISA-----SDGAM 335 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lSfV~-sa~dv~~v~~~L~~~~~~i~IIa---kIET~------~gv~NldeI~~~-----sDgIm 335 (453)
+.++.+.+.|.|+|-+..-. +..++.++++.+++.|-.+..+. .+-++ ++++.+...+.. ++.+.
T Consensus 22 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~d~~~r~~~~~~~~~~i~~a~~lG~~~v~ 101 (275)
T 3qc0_A 22 EAVDICLKHGITAIAPWRDQVAAIGLGEAGRIVRANGLKLTGLCRGGFFPAPDASGREKAIDDNRRAVDEAAELGADCLV 101 (275)
T ss_dssp HHHHHHHHTTCCEEECBHHHHHHHCHHHHHHHHHHHTCEESCEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHTTCSCEE
T ss_pred HHHHHHHHcCCCEEEeccccccccCHHHHHHHHHHcCCceEEeecCCCcCCCCHHHHHHHHHHHHHHHHHHHHhCCCEEE
Confidence 45677788999999876421 35667788899988775433222 12221 234555555543 46677
Q ss_pred EeCCCccc-cCC----CCCHHHHHHHHHHHHHHcCCCEEEEechhhhh---ccCCCCchHHHHHHHHHHHhCccEEEecC
Q 012943 336 VARGDLGA-ELP----IEDVPLLQEDIIRRCRSMQKPVIVATNMLESM---IDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (453)
Q Consensus 336 IgRGDLg~-elg----~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM---~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 407 (453)
+..|.... ... ++.+....+++...|.++|..+.+=+ +..+ ..+...|..++.++...+.. .+=+.-
T Consensus 102 ~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~--~~~~~~~~~~~~~~~~~~~~l~~~~~~---~vg~~~ 176 (275)
T 3qc0_A 102 LVAGGLPGGSKNIDAARRMVVEGIAAVLPHARAAGVPLAIEP--LHPMYAADRACVNTLGQALDICETLGP---GVGVAI 176 (275)
T ss_dssp EECBCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEECC--CCGGGTTTTBSCCCHHHHHHHHHHHCT---TEEEEE
T ss_pred EeeCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHcCCEEEEeE--CCCcccCCccccCCHHHHHHHHHHhCc---ccEEEE
Confidence 76654321 111 12345556788888899999877621 1000 11234566666666666543 222222
Q ss_pred ccc---CCCCHHHHHHHHH
Q 012943 408 ETA---HGKFPLKAVKVMH 423 (453)
Q Consensus 408 ETA---~G~yP~eaV~~m~ 423 (453)
+|. .|..|.++++.+.
T Consensus 177 D~~h~~~~~d~~~~l~~~~ 195 (275)
T 3qc0_A 177 DVYHVWWDPDLANQIARAG 195 (275)
T ss_dssp EHHHHTTCTTHHHHHHHHH
T ss_pred EhhhheeCCCHHHHHHHcC
Confidence 222 3556777766654
No 345
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=32.08 E-value=2.8e+02 Score=24.84 Aligned_cols=121 Identities=8% Similarity=0.113 Sum_probs=66.5
Q ss_pred HHHHhhhhcCCcEEEec-ccc-----CHHHHHHHHHHHHhcCCCceEEE-E--ec--C----hhhhccHHHHHhh-----
Q 012943 271 EDIKFGVDNQVDFYAVS-FVK-----DAKVVHELKDYLKSCNADIHVIV-K--IE--S----ADSIPNLHSIISA----- 330 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lS-fV~-----sa~dv~~v~~~L~~~~~~i~IIa-k--IE--T----~~gv~NldeI~~~----- 330 (453)
+.++.+.+.|.|+|-+. .-. +..++.++++.+++.|-.+..+. - +- . .++++.+...+..
T Consensus 18 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG 97 (278)
T 1i60_A 18 LDLELCEKHGYDYIEIRTMDKLPEYLKDHSLDDLAEYFQTHHIKPLALNALVFFNNRDEKGHNEIITEFKGMMETCKTLG 97 (278)
T ss_dssp HHHHHHHHTTCSEEEEETTTHHHHHTTSSCHHHHHHHHHTSSCEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCEEEEccHHHHHHHhccCCHHHHHHHHHHcCCCeeeeccccccccCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 45677778999999887 321 23567788888887765433221 1 11 1 1234445544443
Q ss_pred cCEEEEeCCCccccCC----CCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccC--CCCchHHHHHHHHHH
Q 012943 331 SDGAMVARGDLGAELP----IEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDH--PTPTRAEVSDIAIAV 396 (453)
Q Consensus 331 sDgImIgRGDLg~elg----~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~--~~PtrAEv~Dv~nav 396 (453)
++.+.+.+|.-.-..+ ++.+....+++...|.++|..+.+ |.+-.. ...|..++.++...+
T Consensus 98 ~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~l-----En~~~~~~~~~~~~~~~~l~~~~ 164 (278)
T 1i60_A 98 VKYVVAVPLVTEQKIVKEEIKKSSVDVLTELSDIAEPYGVKIAL-----EFVGHPQCTVNTFEQAYEIVNTV 164 (278)
T ss_dssp CCEEEEECCBCSSCCCHHHHHHHHHHHHHHHHHHHGGGTCEEEE-----ECCCCTTBSSCSHHHHHHHHHHH
T ss_pred CCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCEEEE-----EecCCccchhcCHHHHHHHHHHh
Confidence 4666665443211112 123444556777778888887665 333222 334556666665555
No 346
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=32.01 E-value=92 Score=29.58 Aligned_cols=52 Identities=10% Similarity=0.191 Sum_probs=32.5
Q ss_pred CHHHHHHHHHhCCcEEEeecCC---------CCh-HHHHHHHHHHHHHHhhcCCCcEEEEeecCC
Q 012943 113 SREMIWKLAEEGMNVARLNMSH---------GDH-ASHQKTIDLVKEYNSQFEDKAVAIMLDTKG 167 (453)
Q Consensus 113 s~e~i~~Li~aGmnvaRiNfSH---------g~~-e~~~~~I~~iR~a~~~~~~~~iaIllDLkG 167 (453)
+.+.|+.|-+.|+|.+||-++. +.. +...+.++.+=+...+.| +.+++|+-+
T Consensus 43 ~~~d~~~l~~~G~n~vRi~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~G---i~vildlh~ 104 (320)
T 3nco_A 43 EDEYFKIIKERGFDSVRIPIRWSAHISEKYPYEIDKFFLDRVKHVVDVALKND---LVVIINCHH 104 (320)
T ss_dssp CHHHHHHHHHHTCCEEEECCCGGGSBCSSTTCCBCHHHHHHHHHHHHHHHHTT---CEEEEECCC
T ss_pred CHHHHHHHHHCCCCEEEEeeehHHhcCCCCCCccCHHHHHHHHHHHHHHHHCC---CEEEEEcCC
Confidence 5889999999999999997652 221 122223333323333444 678888865
No 347
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=31.98 E-value=1.9e+02 Score=28.56 Aligned_cols=57 Identities=16% Similarity=0.172 Sum_probs=33.0
Q ss_pred CCCEEEEechhhhhccCCCCchHH-HHHHHHHHHhCccEEEecCcccCCCCHHHHHHHHHHHHHHHh
Q 012943 365 QKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (453)
Q Consensus 365 Gkpvi~aTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE 430 (453)
..|||.- .+..+..| +.-.-.+-..|+|++|+..=--...=+-+.++..+.|+..+.
T Consensus 100 rvpViaG---------vg~~st~eai~la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~ 157 (343)
T 2v9d_A 100 RVPVLIG---------TGGTNARETIELSQHAQQAGADGIVVINPYYWKVSEANLIRYFEQVADSVT 157 (343)
T ss_dssp SSCEEEE---------CCSSCHHHHHHHHHHHHHHTCSEEEEECCSSSCCCHHHHHHHHHHHHHTCS
T ss_pred CCcEEEe---------cCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 4577663 33444455 444455666789998885322122234667778888876543
No 348
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=31.95 E-value=95 Score=28.02 Aligned_cols=68 Identities=22% Similarity=0.170 Sum_probs=39.0
Q ss_pred hHHHHHhhhhcCCcEEEeccc---cCH------HHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh-cCEEEEeC
Q 012943 269 DWEDIKFGVDNQVDFYAVSFV---KDA------KVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVAR 338 (453)
Q Consensus 269 D~~DI~~a~~~gvd~I~lSfV---~sa------~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~-sDgImIgR 338 (453)
+.+++..+. .|+|+|.++-+ .+. -+...++++......++++++- =-. ..+|+.+.+++ ++|+-+++
T Consensus 97 t~~e~~~A~-~GaDyv~~g~vf~t~sk~~~~~~~g~~~l~~~~~~~~~~iPviai-GGI-~~~nv~~~~~~Ga~gVav~s 173 (210)
T 3ceu_A 97 SVEEVKNRK-HFYDYVFMSPIYDSISKVNYYSTYTAEELREAQKAKIIDSKVMAL-GGI-NEDNLLEIKDFGFGGAVVLG 173 (210)
T ss_dssp SHHHHHTTG-GGSSEEEECCCC---------CCCCHHHHHHHHHTTCSSTTEEEE-SSC-CTTTHHHHHHTTCSEEEESH
T ss_pred CHHHHHHHh-hCCCEEEECCcCCCCCCCCCCCCCCHHHHHHHHHhcCCCCCEEEE-CCC-CHHHHHHHHHhCCCEEEEhH
Confidence 344566666 89999987543 111 1344455544321135667762 111 24688888877 89998886
Q ss_pred C
Q 012943 339 G 339 (453)
Q Consensus 339 G 339 (453)
+
T Consensus 174 ~ 174 (210)
T 3ceu_A 174 D 174 (210)
T ss_dssp H
T ss_pred H
Confidence 4
No 349
>1kzl_A Riboflavin synthase; biosynthesis of riboflavin, ligand binding, transferase; HET: CRM; 2.10A {Schizosaccharomyces pombe} SCOP: b.43.4.3 b.43.4.3
Probab=31.94 E-value=64 Score=30.08 Aligned_cols=54 Identities=19% Similarity=0.329 Sum_probs=43.3
Q ss_pred EEecccccccccccCCEEEEeCCeeEEEEEEEeCCeEEEEEe-------eCcEecccceeecC
Q 012943 201 VSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVV-------DGGELKSRRHLNVR 256 (453)
Q Consensus 201 I~v~~~~l~~~vk~Gd~IlIDDG~I~L~V~ev~~~~v~~~V~-------ngG~L~s~KgVnlp 256 (453)
+.+..+.+.+.+++||.|-+|. ++|+|.++.++.+.+-+. +=|.++....||+.
T Consensus 25 l~i~~~~~~~~l~~g~SIAvnG--vcLTV~~~~~~~F~vdvipETl~~T~Lg~l~~Gd~VNLE 85 (208)
T 1kzl_A 25 MKIEAPQILDDCHTGDSIAVNG--TCLTVTDFDRYHFTVGIAPESLRLTNLGQCKAGDPVNLE 85 (208)
T ss_dssp EEEECGGGCTTCCTTCEEEETT--EEEEEEEECSSEEEEEECHHHHHHSSGGGCCTTCEEEEE
T ss_pred EEEechHHhcccCCCCEEEECC--EEeeEEEEcCCEEEEEEeHHHHhhccccccCCCCEEEec
Confidence 4444456778999999999987 899999999998888775 45677778889985
No 350
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=31.87 E-value=1.4e+02 Score=28.52 Aligned_cols=56 Identities=16% Similarity=0.058 Sum_probs=31.6
Q ss_pred CCCEEEEechhhhhccCCCCchHH-HHHHHHHHHhCccEEEecCcccCCCCHHHHHHHHHHHHHHH
Q 012943 365 QKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRT 429 (453)
Q Consensus 365 Gkpvi~aTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~a 429 (453)
..||+.- .+..+-.| +.-.-.+-..|+|++|+..=--...-+-+.++..+.|+..+
T Consensus 70 r~pviaG---------vg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~ 126 (292)
T 2ojp_A 70 RIPVIAG---------TGANATAEAISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIAEHT 126 (292)
T ss_dssp SSCEEEE---------CCCSSHHHHHHHHHHTTTSSCSEEEEECCCSSCCCHHHHHHHHHHHHTTC
T ss_pred CCcEEEe---------cCCccHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhc
Confidence 3677764 33444445 44444455668898888532212223456677777776544
No 351
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=31.83 E-value=1.5e+02 Score=27.08 Aligned_cols=64 Identities=16% Similarity=0.187 Sum_probs=36.9
Q ss_pred HhhhhcCCcEEEec-----cccCHHHHHHHHHHHHhcCCCceEEE--EecChhhhccHHHHHhh-cCEEEEeCCCcc
Q 012943 274 KFGVDNQVDFYAVS-----FVKDAKVVHELKDYLKSCNADIHVIV--KIESADSIPNLHSIISA-SDGAMVARGDLG 342 (453)
Q Consensus 274 ~~a~~~gvd~I~lS-----fV~sa~dv~~v~~~L~~~~~~i~IIa--kIET~~gv~NldeI~~~-sDgImIgRGDLg 342 (453)
+...+.|+|+|-+. |......+..+++..+ ..++++++ .|.+++ .+++.++. +|++++|+..|.
T Consensus 37 ~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~--~~~ipvi~~ggI~~~~---~~~~~~~~Gad~V~lg~~~l~ 108 (253)
T 1thf_D 37 KFYSEIGIDELVFLDITASVEKRKTMLELVEKVAE--QIDIPFTVGGGIHDFE---TASELILRGADKVSINTAAVE 108 (253)
T ss_dssp HHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHT--TCCSCEEEESSCCSHH---HHHHHHHTTCSEEEESHHHHH
T ss_pred HHHHHcCCCEEEEECCchhhcCCcccHHHHHHHHH--hCCCCEEEeCCCCCHH---HHHHHHHcCCCEEEEChHHHh
Confidence 45567899987654 2222233333444332 23566666 465553 35555555 899999877664
No 352
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=31.83 E-value=1.1e+02 Score=30.75 Aligned_cols=153 Identities=13% Similarity=0.108 Sum_probs=87.1
Q ss_pred hhHHHHHhhhhc-CCcEEEecc-------ccCHHHHHHHHHHHHhcCCCceEEEE--e-c--------ChhhhccHHHHH
Q 012943 268 KDWEDIKFGVDN-QVDFYAVSF-------VKDAKVVHELKDYLKSCNADIHVIVK--I-E--------SADSIPNLHSII 328 (453)
Q Consensus 268 kD~~DI~~a~~~-gvd~I~lSf-------V~sa~dv~~v~~~L~~~~~~i~IIak--I-E--------T~~gv~NldeI~ 328 (453)
.|...|+.+.+. |+++|-++- +-+.+++.++++.+++.|-.+..+.- + | ..+.++++.+.+
T Consensus 31 ~d~~~L~~i~q~~G~~gIe~~l~~~~~g~~w~~~~i~~lk~~l~~~GL~i~~i~s~~~~~~i~~~~~~r~~~ie~~k~~i 110 (386)
T 3bdk_A 31 KDPVTLEEIKAIPGMQGIVTAVYDVPVGQAWPLENILELKKMVEEAGLEITVIESIPVHEDIKQGKPNRDALIENYKTSI 110 (386)
T ss_dssp TCSSCHHHHHTSTTCCEEEECCCSSCSSSCCCHHHHHHHHHHHHTTTCEEEEEECCCCCHHHHTTCTTHHHHHHHHHHHH
T ss_pred CCHHHHHHHHhcCCCCEEEeCCcccCCCCCCCHHHHHHHHHHHHHcCCEEEEEeccccccccccCcHHHHHHHHHHHHHH
Confidence 455566777788 999987652 34668999999999987655443311 1 1 134556666666
Q ss_pred hh-----cCEEEE--------eCCCccc--------------------------cC---------------------CC-
Q 012943 329 SA-----SDGAMV--------ARGDLGA--------------------------EL---------------------PI- 347 (453)
Q Consensus 329 ~~-----sDgImI--------gRGDLg~--------------------------el---------------------g~- 347 (453)
.. +..|.. +|.||.. .+ ++
T Consensus 111 ~~aa~lGi~~v~~nf~p~~~w~rt~~~~~~~~G~~~~~f~~~~~~~~d~~~~~~~~pg~~~~~~~~~~~~~~~~y~~~~~ 190 (386)
T 3bdk_A 111 RNVGAAGIPVVCYNFMPVFDWTRSDLHHPLPDGSTSLAFLKSDLAGVDPVADDLNLPGWDSSYSKEEMKAIIENYRQNIS 190 (386)
T ss_dssp HHHHTTTCCEEEECCCSSCSCCCSEEEEECTTSCEEEEEEGGGGSSCCC--------------CCHHHHHHHHHHHHTCC
T ss_pred HHHHHcCCCEEEEcCcccccccccccccccCCCccccccchhhhhcccchhhccCCCCccccccHHHHHHHHhhhccCCC
Confidence 54 344432 3655431 01 11
Q ss_pred -----CCHHHHHHHHHHHHHHcCCCEEEEechhhhh-----ccCCCCchHHHHHHHHHHHhCccEEEecCc--ccC-CCC
Q 012943 348 -----EDVPLLQEDIIRRCRSMQKPVIVATNMLESM-----IDHPTPTRAEVSDIAIAVREGADAVMLSGE--TAH-GKF 414 (453)
Q Consensus 348 -----e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM-----~~~~~PtrAEv~Dv~nav~~G~D~vmLs~E--TA~-G~y 414 (453)
+.+....++++..|.++|+.+.+-.. +.- .....-|.+++..+.+++-.-.-+++|-.- .+. |..
T Consensus 191 ~e~~w~~l~~~L~~i~~~Aee~GV~Laiep~--dpp~~~~Gl~riv~t~e~~~rll~~vdsp~~gl~lDtG~l~~~~~~D 268 (386)
T 3bdk_A 191 EEDLWANLEYFIKAILPTAEEAGVKMAIHPD--DPPYGIFGLPRIITGQEAVERFLNLYDSEHNGITMCVGSYASDPKND 268 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSSCEEEECCC--SSSSCCTTCCCCCCSHHHHHHHHHTTCSTTEEEEEEHHHHHTSTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCEEEEeeC--CcccccccCCceeCCHHHHHHHHHhcCCCCEEEEEccCchhhcCCCC
Confidence 12445569999999999998776210 000 011233556666666666544446666321 123 777
Q ss_pred HHHHHHHH
Q 012943 415 PLKAVKVM 422 (453)
Q Consensus 415 P~eaV~~m 422 (453)
|.++++..
T Consensus 269 ~~~~i~~~ 276 (386)
T 3bdk_A 269 VLAMTEYA 276 (386)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 87777765
No 353
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=31.82 E-value=1.7e+02 Score=28.64 Aligned_cols=79 Identities=15% Similarity=0.300 Sum_probs=44.8
Q ss_pred CCCceEEEEecCh------hhhccHHHHHhh-cCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhh
Q 012943 306 NADIHVIVKIESA------DSIPNLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESM 378 (453)
Q Consensus 306 ~~~i~IIakIET~------~gv~NldeI~~~-sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM 378 (453)
+.+..|+|+.|.. ++++......++ +|+||+- +++. ...+-+.|++..+|++. +|++-
T Consensus 157 ~~~~~I~ARtda~~~~g~~~ai~Ra~ay~eAGAD~i~~e--------~~~~----~~~~~~i~~~~~~P~~~--n~~~~- 221 (305)
T 3ih1_A 157 APSLYIVARTDARGVEGLDEAIERANAYVKAGADAIFPE--------ALQS----EEEFRLFNSKVNAPLLA--NMTEF- 221 (305)
T ss_dssp CTTSEEEEEECCHHHHCHHHHHHHHHHHHHHTCSEEEET--------TCCS----HHHHHHHHHHSCSCBEE--ECCTT-
T ss_pred CCCeEEEEeeccccccCHHHHHHHHHHHHHcCCCEEEEc--------CCCC----HHHHHHHHHHcCCCEEE--eecCC-
Confidence 3456788888875 444555544444 8999982 1222 23344456677889864 34332
Q ss_pred ccCCCCchHHHHHHHHHHHhCccEEEe
Q 012943 379 IDHPTPTRAEVSDIAIAVREGADAVML 405 (453)
Q Consensus 379 ~~~~~PtrAEv~Dv~nav~~G~D~vmL 405 (453)
-..|.++.+|.. ..|+..+..
T Consensus 222 g~tp~~~~~eL~------~lGv~~v~~ 242 (305)
T 3ih1_A 222 GKTPYYSAEEFA------NMGFQMVIY 242 (305)
T ss_dssp SSSCCCCHHHHH------HTTCSEEEE
T ss_pred CCCCCCCHHHHH------HcCCCEEEE
Confidence 123456655543 447777765
No 354
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=31.79 E-value=1.5e+02 Score=28.74 Aligned_cols=75 Identities=15% Similarity=0.147 Sum_probs=45.6
Q ss_pred HHhhhhcCCcEEEeccc----cCHHHHHHHHHHHHhcCCCce-EE--EEecChhhhccHHHHHhh-cCEEEEeCCCcccc
Q 012943 273 IKFGVDNQVDFYAVSFV----KDAKVVHELKDYLKSCNADIH-VI--VKIESADSIPNLHSIISA-SDGAMVARGDLGAE 344 (453)
Q Consensus 273 I~~a~~~gvd~I~lSfV----~sa~dv~~v~~~L~~~~~~i~-II--akIET~~gv~NldeI~~~-sDgImIgRGDLg~e 344 (453)
.+.+.+.|+|+|.+... .+.+++.++.+..... ..++ |+ .-+-..+-++++.+.+.. ++|+.+||.=+...
T Consensus 183 a~~a~~lGaD~iKv~~~~~~~g~~~~~~~vv~~~~~~-~~~P~Vv~aGG~~~~~~~~~~~~a~~aGa~Gv~vGRaI~q~~ 261 (304)
T 1to3_A 183 AKELGDSGADLYKVEMPLYGKGARSDLLTASQRLNGH-INMPWVILSSGVDEKLFPRAVRVAMEAGASGFLAGRAVWSSV 261 (304)
T ss_dssp HHHHTTSSCSEEEECCGGGGCSCHHHHHHHHHHHHHT-CCSCEEECCTTSCTTTHHHHHHHHHHTTCCEEEESHHHHGGG
T ss_pred HHHHHHcCCCEEEeCCCcCCCCCHHHHHHHHHhcccc-CCCCeEEEecCCCHHHHHHHHHHHHHcCCeEEEEehHHhCcc
Confidence 56667899999999884 3445555554443331 1223 22 233222345677777766 89999999877664
Q ss_pred CCCC
Q 012943 345 LPIE 348 (453)
Q Consensus 345 lg~e 348 (453)
++.+
T Consensus 262 ~~~~ 265 (304)
T 1to3_A 262 IGLP 265 (304)
T ss_dssp TTCS
T ss_pred ccCC
Confidence 4433
No 355
>1i8d_A Riboflavin synthase; riboflavin biosynthesis, antimicrobial target, structure-based design, transferase; 2.00A {Escherichia coli} SCOP: b.43.4.3 b.43.4.3 PDB: 1hze_A* 1i18_A* 1pkv_A*
Probab=31.76 E-value=1.1e+02 Score=28.58 Aligned_cols=54 Identities=22% Similarity=0.322 Sum_probs=42.6
Q ss_pred EEeccc-ccccccccCCEEEEeCCeeEEEEEEEeCCeEEEEEe-------eCcEecccceeecC
Q 012943 201 VSVNYD-DFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVV-------DGGELKSRRHLNVR 256 (453)
Q Consensus 201 I~v~~~-~l~~~vk~Gd~IlIDDG~I~L~V~ev~~~~v~~~V~-------ngG~L~s~KgVnlp 256 (453)
+.+..+ .+.+.+++||.|-+|. ++|+|.++.++.+.+-+. +=|.++....|||.
T Consensus 24 l~i~~~~~~~~~l~~g~SIAvnG--vcLTV~~v~~~~F~vdvipETl~~T~Lg~l~~Gd~VNLE 85 (213)
T 1i8d_A 24 HVVELPDHMLDGLETGASVAHNG--CCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVE 85 (213)
T ss_dssp EEEECCGGGTTTCCTTCEEEETT--EEEEEEEEETTEEEEEEEHHHHHHSGGGGCCTTCEEEEE
T ss_pred EEEEEChHHhccCCCCcEEEECC--EEeeEEEEcCCEEEEEEeHHHHhhcccccCCCCCEEEeC
Confidence 344333 5678999999999987 899999999998888775 34677777889885
No 356
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=31.72 E-value=2.6e+02 Score=26.64 Aligned_cols=96 Identities=10% Similarity=-0.006 Sum_probs=54.1
Q ss_pred HHHHhhhhcCCcEEEe------ccccCHHHHHHHHHHHHhcCCCceEEEEec---ChhhhccHHHHHhh-cCEEEEeCCC
Q 012943 271 EDIKFGVDNQVDFYAV------SFVKDAKVVHELKDYLKSCNADIHVIVKIE---SADSIPNLHSIISA-SDGAMVARGD 340 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~l------SfV~sa~dv~~v~~~L~~~~~~i~IIakIE---T~~gv~NldeI~~~-sDgImIgRGD 340 (453)
+.+++.++.|+|+|.+ ++.-+.++-.++-+...+.... ||+-+= |.++++......+. +|++|+-+-.
T Consensus 24 ~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g--viaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 101 (293)
T 1w3i_A 24 IHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK--IIFQVGGLNLDDAIRLAKLSKDFDIVGIASYAPY 101 (293)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC--EEEECCCSCHHHHHHHHHHGGGSCCSEEEEECCC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC--EEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 4557778999999876 2334444544444444433333 788763 45666555544443 7999987554
Q ss_pred ccccCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 012943 341 LGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (453)
Q Consensus 341 Lg~elg~e~v~~aqk~Ii~~c~~aGkpvi~a 371 (453)
..-...-+.+...-+ ..|.+.+.|+++.
T Consensus 102 y~~~~s~~~l~~~f~---~va~a~~lPiilY 129 (293)
T 1w3i_A 102 YYPRMSEKHLVKYFK---TLCEVSPHPVYLY 129 (293)
T ss_dssp SCSSCCHHHHHHHHH---HHHHHCSSCEEEE
T ss_pred CCCCCCHHHHHHHHH---HHHhhCCCCEEEE
Confidence 422011122333333 3455668998875
No 357
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=31.45 E-value=74 Score=31.37 Aligned_cols=62 Identities=8% Similarity=0.093 Sum_probs=41.5
Q ss_pred CcEEEEecCCCCCCHH----HHHHHHHhCCcEEEeecCCCChHHHHHHHHHHHHHHhhcCCCcEEEEeec
Q 012943 100 KTKIVCTIGPSTSSRE----MIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDT 165 (453)
Q Consensus 100 ~TKIi~TiGPss~s~e----~i~~Li~aGmnvaRiNfSHg~~e~~~~~I~~iR~a~~~~~~~~iaIllDL 165 (453)
+....+|.|....+.+ ..+++.++|-+.+.|++.|++.+.-.+.++.+|++. + ..+.|++|.
T Consensus 133 ~v~~y~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~---G-~d~~l~vDa 198 (371)
T 2ovl_A 133 VVPVYAGGIDLELPVADLKTQADRFLAGGFRAIKMKVGRPDLKEDVDRVSALREHL---G-DSFPLMVDA 198 (371)
T ss_dssp EEEEEEECCBTTSCHHHHHHHHHHHHHTTCSCEEEECCCSSHHHHHHHHHHHHHHH---C-TTSCEEEEC
T ss_pred CeeEEEeCCCcCCCHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHHHHHHh---C-CCCeEEEEC
Confidence 4455666553222343 456678899999999999988877777777777653 3 334566664
No 358
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=31.40 E-value=65 Score=30.51 Aligned_cols=51 Identities=14% Similarity=0.119 Sum_probs=32.6
Q ss_pred CcEEEEecC-CCC-CCHHHHHHHHHhCCcEEEeecCCCChHHHHHHHHHHHHHHh
Q 012943 100 KTKIVCTIG-PST-SSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNS 152 (453)
Q Consensus 100 ~TKIi~TiG-Pss-~s~e~i~~Li~aGmnvaRiNfSHg~~e~~~~~I~~iR~a~~ 152 (453)
+++...|.| |.- .+.+.++.|.++|.|++=+-.|.|...+ ..++.+++..+
T Consensus 7 ~~~~~i~~gDP~~~~t~~~~~~l~~~GaD~ielG~S~Gvt~~--~~~~~v~~ir~ 59 (240)
T 1viz_A 7 TEWKHVFKLDPNKDLPDEQLEILCESGTDAVIIGGSDGVTED--NVLRMMSKVRR 59 (240)
T ss_dssp GGCCEEEEECTTSCCCHHHHHHHHTSCCSEEEECC----CHH--HHHHHHHHHTT
T ss_pred CcceEEEeeCCCccccHHHHHHHHHcCCCEEEECCCCCCCHH--HHHHHHHHhhC
Confidence 344555665 543 6789999999999999999999886643 34444554433
No 359
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=31.22 E-value=72 Score=30.97 Aligned_cols=62 Identities=10% Similarity=0.134 Sum_probs=44.4
Q ss_pred hHHHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhh--hccHHHHHhh-cCEEEEeC
Q 012943 269 DWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADS--IPNLHSIISA-SDGAMVAR 338 (453)
Q Consensus 269 D~~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~g--v~NldeI~~~-sDgImIgR 338 (453)
+.+++..+++.|+|+|.+..+ ++++++++.+.+. .++++.| --| .+|+.++++. +|+|-+|.
T Consensus 205 t~eea~eA~~aGaD~I~ld~~-~~~~~k~av~~v~---~~ipi~A----sGGIt~eni~~~a~tGvD~IsVgs 269 (286)
T 1x1o_A 205 SLEELEEALEAGADLILLDNF-PLEALREAVRRVG---GRVPLEA----SGNMTLERAKAAAEAGVDYVSVGA 269 (286)
T ss_dssp SHHHHHHHHHHTCSEEEEESC-CHHHHHHHHHHHT---TSSCEEE----ESSCCHHHHHHHHHHTCSEEECTH
T ss_pred CHHHHHHHHHcCCCEEEECCC-CHHHHHHHHHHhC---CCCeEEE----EcCCCHHHHHHHHHcCCCEEEEcH
Confidence 356677778899999999875 6777776666553 3455544 222 5888888887 89999864
No 360
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=30.98 E-value=1.7e+02 Score=27.85 Aligned_cols=57 Identities=18% Similarity=0.213 Sum_probs=34.1
Q ss_pred CCCEEEEechhhhhccCCCCchHH-HHHHHHHHHhCccEEEecCcccCCCCHHHHHHHHHHHHHHHh
Q 012943 365 QKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (453)
Q Consensus 365 Gkpvi~aTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE 430 (453)
..||+.- .+..+-+| +.-.-.+-..|+|++|+..=--...-+-+.++..+.|+..+.
T Consensus 69 r~pviaG---------vg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~ 126 (292)
T 2vc6_A 69 RVPVIAG---------AGSNSTAEAIAFVRHAQNAGADGVLIVSPYYNKPTQEGIYQHFKAIDAAST 126 (292)
T ss_dssp SSCBEEE---------CCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCS
T ss_pred CCcEEEe---------cCCccHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 4677764 33344445 444555666799999886332222234677788888877654
No 361
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=30.87 E-value=1.1e+02 Score=29.72 Aligned_cols=72 Identities=24% Similarity=0.220 Sum_probs=40.9
Q ss_pred cCEEEEeCCC-cc-ccCCCCC-----HHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEE
Q 012943 331 SDGAMVARGD-LG-AELPIED-----VPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAV 403 (453)
Q Consensus 331 sDgImIgRGD-Lg-~elg~e~-----v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~v 403 (453)
.|.|++ || |+ +.+|++. +..+....-..++....|.+++= +..|-....|.++ +.-+...+..|+++|
T Consensus 38 ~d~ilv--GdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD--~pfgsy~~s~~~a-~~na~rl~kaGa~aV 112 (275)
T 1o66_A 38 VEMLLV--GDSLGMAVQGRKSTLPVSLRDMCYHTECVARGAKNAMIVSD--LPFGAYQQSKEQA-FAAAAELMAAGAHMV 112 (275)
T ss_dssp CCEEEE--CTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEEEE--CCTTSSSSCHHHH-HHHHHHHHHTTCSEE
T ss_pred CCEEEE--CHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhCCCCeEEEE--CCCCCccCCHHHH-HHHHHHHHHcCCcEE
Confidence 799887 54 54 3457753 44444444455666777766541 2222221223322 344567788999999
Q ss_pred EecC
Q 012943 404 MLSG 407 (453)
Q Consensus 404 mLs~ 407 (453)
-|=+
T Consensus 113 klEd 116 (275)
T 1o66_A 113 KLEG 116 (275)
T ss_dssp EEEC
T ss_pred EECC
Confidence 9954
No 362
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=30.83 E-value=97 Score=29.57 Aligned_cols=96 Identities=4% Similarity=0.015 Sum_probs=48.3
Q ss_pred CHhhHHHH-HhhhhcCCcEEEeccc-------c------------------C----HHHHHHHHHHHHhcCCCceEEE--
Q 012943 266 TDKDWEDI-KFGVDNQVDFYAVSFV-------K------------------D----AKVVHELKDYLKSCNADIHVIV-- 313 (453)
Q Consensus 266 tekD~~DI-~~a~~~gvd~I~lSfV-------~------------------s----a~dv~~v~~~L~~~~~~i~IIa-- 313 (453)
+..+..++ +.+.+.|+|+|.++-. . . +..+..+++.-+..+.+++||+
T Consensus 170 ~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi~~G 249 (311)
T 1jub_A 170 DLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGTG 249 (311)
T ss_dssp SHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEEES
T ss_pred CHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCEEEEC
Confidence 44455443 5556789999877531 0 0 1123333333333334788886
Q ss_pred EecChhhhccHHHHHh-hcCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCC
Q 012943 314 KIESADSIPNLHSIIS-ASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQK 366 (453)
Q Consensus 314 kIET~~gv~NldeI~~-~sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGk 366 (453)
-|.|++-+ .+.+. -+|++++||+=|.- +..-+..+.+.+-....+.|.
T Consensus 250 GI~~~~da---~~~l~~GAd~V~vg~~~l~~--~p~~~~~i~~~l~~~l~~~g~ 298 (311)
T 1jub_A 250 GIETGQDA---FEHLLCGATMLQIGTALHKE--GPAIFDRIIKELEEIMNQKGY 298 (311)
T ss_dssp SCCSHHHH---HHHHHHTCSEEEECHHHHHH--CTHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCHHHH---HHHHHcCCCEEEEchHHHhc--CcHHHHHHHHHHHHHHHHcCC
Confidence 35554333 22222 38999999875531 122233344444444444443
No 363
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=30.72 E-value=2.8e+02 Score=24.47 Aligned_cols=109 Identities=12% Similarity=0.187 Sum_probs=60.1
Q ss_pred HHHHHhhhhcCCcEEEe-----ccccC----HHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh-cCEEEEeCC
Q 012943 270 WEDIKFGVDNQVDFYAV-----SFVKD----AKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARG 339 (453)
Q Consensus 270 ~~DI~~a~~~gvd~I~l-----SfV~s----a~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~-sDgImIgRG 339 (453)
.+.++.+.+.|+|++.+ +|++. .+.++++++.. +..+.+-.+|.++.- .++..+++ +|++.+.-+
T Consensus 19 ~~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g~~~i~~i~~~~---~~~~~v~l~v~d~~~--~i~~~~~~gad~v~vh~~ 93 (220)
T 2fli_A 19 ASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHS---KLVFDCHLMVVDPER--YVEAFAQAGADIMTIHTE 93 (220)
T ss_dssp HHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCHHHHHHHHTTC---CSEEEEEEESSSGGG--GHHHHHHHTCSEEEEEGG
T ss_pred HHHHHHHHHcCCCEEEEEeecCCCCCccccCHHHHHHHHHhC---CCCEEEEEeecCHHH--HHHHHHHcCCCEEEEccC
Confidence 35667777889987433 44554 44454444322 334555567776632 35555544 899998622
Q ss_pred CccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEe
Q 012943 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVML 405 (453)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmL 405 (453)
.. +.. ...++.+++.|+.++++. ++ .|..| ...++..++|.+++
T Consensus 94 ~~------~~~----~~~~~~~~~~g~~i~~~~--------~~-~t~~e---~~~~~~~~~d~vl~ 137 (220)
T 2fli_A 94 ST------RHI----HGALQKIKAAGMKAGVVI--------NP-GTPAT---ALEPLLDLVDQVLI 137 (220)
T ss_dssp GC------SCH----HHHHHHHHHTTSEEEEEE--------CT-TSCGG---GGGGGTTTCSEEEE
T ss_pred cc------ccH----HHHHHHHHHcCCcEEEEE--------cC-CCCHH---HHHHHHhhCCEEEE
Confidence 11 222 245556677898888863 11 11112 12344577898865
No 364
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=30.69 E-value=1.1e+02 Score=30.03 Aligned_cols=46 Identities=20% Similarity=0.210 Sum_probs=33.9
Q ss_pred HHHHHHHhCCcEEEeecCCC------ChHHHHHHHHHHHHHHhhcCCCcEEEEeec
Q 012943 116 MIWKLAEEGMNVARLNMSHG------DHASHQKTIDLVKEYNSQFEDKAVAIMLDT 165 (453)
Q Consensus 116 ~i~~Li~aGmnvaRiNfSHg------~~e~~~~~I~~iR~a~~~~~~~~iaIllDL 165 (453)
..+++.++|-+.+.|++.|+ +.+.-.+.++.+|++. + ..+.|++|.
T Consensus 156 ~a~~~~~~Gf~~iKik~g~~~~~~~~~~~~~~e~v~avr~a~---g-~d~~l~vDa 207 (382)
T 1rvk_A 156 FAETLVKRGYKGIKLHTWMPPVSWAPDVKMDLKACAAVREAV---G-PDIRLMIDA 207 (382)
T ss_dssp HHHHHHHHTCSEEEEECCCTTSTTCCCHHHHHHHHHHHHHHH---C-TTSEEEEEC
T ss_pred HHHHHHHCCCCEEEEcCCcCccccccchHHHHHHHHHHHHHh---C-CCCeEEEEC
Confidence 45667889999999999997 6666667777777653 4 445677775
No 365
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=30.64 E-value=37 Score=33.22 Aligned_cols=65 Identities=9% Similarity=0.231 Sum_probs=39.4
Q ss_pred HHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEE----EecChhhhccHHHHHhh-cCEEEEeCCCccc
Q 012943 272 DIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIV----KIESADSIPNLHSIISA-SDGAMVARGDLGA 343 (453)
Q Consensus 272 DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIa----kIET~~gv~NldeI~~~-sDgImIgRGDLg~ 343 (453)
....+.+.|+|+|-.+|. .+.+.++. .. ..++|++ +..+.+.++++.+.+.+ ++|+.+||.=+..
T Consensus 194 aariA~elGAD~VKt~~t--~e~~~~vv---~~--~~vPVv~~GG~~~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q~ 263 (295)
T 3glc_A 194 ATRIAAEMGAQIIKTYYV--EKGFERIV---AG--CPVPIVIAGGKKLPEREALEMCWQAIDQGASGVDMGRNIFQS 263 (295)
T ss_dssp HHHHHHHTTCSEEEEECC--TTTHHHHH---HT--CSSCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEESHHHHTS
T ss_pred HHHHHHHhCCCEEEeCCC--HHHHHHHH---Hh--CCCcEEEEECCCCCHHHHHHHHHHHHHhCCeEEEeHHHHhcC
Confidence 345678999999999986 33443333 22 2355553 22334556666666655 7888888765544
No 366
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=30.57 E-value=1.1e+02 Score=28.97 Aligned_cols=64 Identities=5% Similarity=0.130 Sum_probs=39.2
Q ss_pred HHHHhhhhcCCcEEEecc------ccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh---cCEEEEeC
Q 012943 271 EDIKFGVDNQVDFYAVSF------VKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA---SDGAMVAR 338 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lSf------V~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~---sDgImIgR 338 (453)
+++..+.+.|+|+|++.- --+.+...++...+...+.++.++| | .|+.+.+++... +||++||.
T Consensus 165 ~E~~~a~~~gad~IGvn~~~l~~~~~dl~~~~~L~~~i~~~~~~~~vIA--e--gGI~s~~dv~~l~~Ga~gvlVGs 237 (254)
T 1vc4_A 165 RELEIALEAGAEVLGINNRDLATLHINLETAPRLGRLARKRGFGGVLVA--E--SGYSRKEELKALEGLFDAVLIGT 237 (254)
T ss_dssp HHHHHHHHHTCSEEEEESBCTTTCCBCTTHHHHHHHHHHHTTCCSEEEE--E--SCCCSHHHHHTTTTTCSEEEECH
T ss_pred HHHHHHHHcCCCEEEEccccCcCCCCCHHHHHHHHHhCccccCCCeEEE--E--cCCCCHHHHHHHHcCCCEEEEeH
Confidence 445577788899998843 2333444445554433222566776 3 467767776665 68999984
No 367
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=30.53 E-value=5e+02 Score=27.35 Aligned_cols=150 Identities=12% Similarity=-0.010 Sum_probs=89.3
Q ss_pred CCCHhhHHHH-HhhhhcCCcEEEecc----cc-----CHHHHHHHHHHHHhcCCCceEEEEe--cChhhhcc--------
Q 012943 264 SITDKDWEDI-KFGVDNQVDFYAVSF----VK-----DAKVVHELKDYLKSCNADIHVIVKI--ESADSIPN-------- 323 (453)
Q Consensus 264 ~ltekD~~DI-~~a~~~gvd~I~lSf----V~-----sa~dv~~v~~~L~~~~~~i~IIakI--ET~~gv~N-------- 323 (453)
.++..|+..| +...+.|++.|=+.+ +. ++.+...++.+.+. ..++.+.+.+ =+..|..+
T Consensus 43 ~~~tedKl~Ia~~L~~~Gv~~IE~G~patF~~~~rfl~~d~~e~lr~l~~~-~~~~~l~~L~R~~N~~G~~~ypddv~~~ 121 (539)
T 1rqb_A 43 RMAMEDMVGACADIDAAGYWSVECWGGATYDSCIRFLNEDPWERLRTFRKL-MPNSRLQMLLRGQNLLGYRHYNDEVVDR 121 (539)
T ss_dssp CCCGGGTGGGHHHHHHTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHH-CTTSCEEEEECGGGTTSSSCCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCcccccccchhccCCCHHHHHHHHHHh-CCCCEEEEEeccccccCcccCcccccHH
Confidence 4666776544 444668999987753 21 45565555554433 2455555555 12223322
Q ss_pred -HHHHHhh-cCEEEE--eCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHH-HHHh
Q 012943 324 -LHSIISA-SDGAMV--ARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI-AVRE 398 (453)
Q Consensus 324 -ldeI~~~-sDgImI--gRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~n-av~~ 398 (453)
++..++. .|.+-| +-.|+ ......++.++++|+.+-.+= |+...+.-+...+.+++. +...
T Consensus 122 ~ve~a~~aGvd~vrIf~s~sd~----------~ni~~~i~~ak~~G~~v~~~i----~~~~~~~~~~e~~~~~a~~l~~~ 187 (539)
T 1rqb_A 122 FVDKSAENGMDVFRVFDAMNDP----------RNMAHAMAAVKKAGKHAQGTI----CYTISPVHTVEGYVKLAGQLLDM 187 (539)
T ss_dssp HHHHHHHTTCCEEEECCTTCCT----------HHHHHHHHHHHHTTCEEEEEE----ECCCSTTCCHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCCCEEEEEEehhHH----------HHHHHHHHHHHHCCCeEEEEE----EeeeCCCCCHHHHHHHHHHHHHc
Confidence 3433333 564443 33333 334788899999999873210 222333334445566555 5567
Q ss_pred CccEEEecCcccCCCCHHHHHHHHHHHHHHH
Q 012943 399 GADAVMLSGETAHGKFPLKAVKVMHTVALRT 429 (453)
Q Consensus 399 G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~a 429 (453)
|+|.+-| .+|+=+..|-++-+.+..+..+.
T Consensus 188 Gad~I~L-~DT~G~~~P~~v~~lv~~l~~~~ 217 (539)
T 1rqb_A 188 GADSIAL-KDMAALLKPQPAYDIIKAIKDTY 217 (539)
T ss_dssp TCSEEEE-EETTCCCCHHHHHHHHHHHHHHH
T ss_pred CCCEEEe-CCCCCCcCHHHHHHHHHHHHHhc
Confidence 9999988 48888889999988888888766
No 368
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A
Probab=30.37 E-value=69 Score=30.68 Aligned_cols=22 Identities=27% Similarity=0.385 Sum_probs=18.9
Q ss_pred CCHHHHHHHHHhCCcEEEeecC
Q 012943 112 SSREMIWKLAEEGMNVARLNMS 133 (453)
Q Consensus 112 ~s~e~i~~Li~aGmnvaRiNfS 133 (453)
.+.+.++.|-+.|+|++||-++
T Consensus 29 ~~~~d~~~i~~~G~n~vRi~i~ 50 (343)
T 1ceo_A 29 ITEKDIETIAEAGFDHVRLPFD 50 (343)
T ss_dssp SCHHHHHHHHHHTCCEEEEEEE
T ss_pred cCHHHHHHHHHcCCCEEEecCC
Confidence 3578899999999999999865
No 369
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=30.34 E-value=3.6e+02 Score=25.66 Aligned_cols=146 Identities=18% Similarity=0.236 Sum_probs=82.6
Q ss_pred CCHhhH-HHHHhhhhcC-CcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEe----cChhhhccHHHHHhh-----cCE
Q 012943 265 ITDKDW-EDIKFGVDNQ-VDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKI----ESADSIPNLHSIISA-----SDG 333 (453)
Q Consensus 265 ltekD~-~DI~~a~~~g-vd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakI----ET~~gv~NldeI~~~-----sDg 333 (453)
.++.+. +-++.+++.| +|+|-+-.-...+.+.++.+...+ .+++||+-- .|+. .+.+.+++.. +|.
T Consensus 116 ~~~~~~~~ll~~~l~~g~~dyIDvEl~~~~~~~~~l~~~a~~--~~~kvI~S~Hdf~~tP~-~~el~~~~~~~~~~GaDI 192 (276)
T 3o1n_A 116 LTTGQYIDLNRAAVDSGLVDMIDLELFTGDDEVKATVGYAHQ--HNVAVIMSNHDFHKTPA-AEEIVQRLRKMQELGADI 192 (276)
T ss_dssp CCHHHHHHHHHHHHHHTCCSEEEEEGGGCHHHHHHHHHHHHH--TTCEEEEEEEESSCCCC-HHHHHHHHHHHHHTTCSE
T ss_pred CCHHHHHHHHHHHHhcCCCCEEEEECcCCHHHHHHHHHHHHh--CCCEEEEEeecCCCCcC-HHHHHHHHHHHHHcCCCE
Confidence 355554 5557888999 999988765555555555544433 346666633 3553 3334444332 576
Q ss_pred EEEeCCCccccCCCCCHHHHHHHHHHHHHH-cCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEE--EecCccc
Q 012943 334 AMVARGDLGAELPIEDVPLLQEDIIRRCRS-MQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAV--MLSGETA 410 (453)
Q Consensus 334 ImIgRGDLg~elg~e~v~~aqk~Ii~~c~~-aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~v--mLs~ETA 410 (453)
+=|+.- .-..+++..+.+-..+.... .++|+|.. +|=..+..+| +.+.+. |+-.. .+...+|
T Consensus 193 vKia~~----a~s~~Dvl~Ll~~~~~~~~~~~~~PlIa~-----~MG~~G~~SR-----i~~~~~-GS~vTf~~l~~~sA 257 (276)
T 3o1n_A 193 PKIAVM----PQTKADVLTLLTATVEMQERYADRPIITM-----SMSKTGVISR-----LAGEVF-GSAATFGAVKKASA 257 (276)
T ss_dssp EEEEEC----CSSHHHHHHHHHHHHHHHHHTCCSCCEEE-----ECSGGGTHHH-----HCHHHH-TCCEEECBSSCCSS
T ss_pred EEEEec----CCChHHHHHHHHHHHHHHhcCCCCCEEEE-----ECCCchhhHH-----HHHHHh-CCceEecCCCCCCC
Confidence 655411 11123444444333222222 67898764 5555555555 556554 33333 3567799
Q ss_pred CCCCHHHHHHHHHHHHHH
Q 012943 411 HGKFPLKAVKVMHTVALR 428 (453)
Q Consensus 411 ~G~yP~eaV~~m~~I~~~ 428 (453)
=|..+++-++.+-++..+
T Consensus 258 PGQl~~~~l~~~l~~l~~ 275 (276)
T 3o1n_A 258 PGAISVADLRTVLTILHQ 275 (276)
T ss_dssp TTCCBHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhcc
Confidence 999999888877766654
No 370
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=30.25 E-value=3.5e+02 Score=25.42 Aligned_cols=150 Identities=18% Similarity=0.170 Sum_probs=83.9
Q ss_pred CCCCCCHhhH-HHHHhhhhcCCcEEEe-----ccccCHHHHHHHHHHHHhcCCCceEEEEecCh-hhh------cc----
Q 012943 261 NLPSITDKDW-EDIKFGVDNQVDFYAV-----SFVKDAKVVHELKDYLKSCNADIHVIVKIESA-DSI------PN---- 323 (453)
Q Consensus 261 ~lp~ltekD~-~DI~~a~~~gvd~I~l-----SfV~sa~dv~~v~~~L~~~~~~i~IIakIET~-~gv------~N---- 323 (453)
++..-|.++. +.++.+...|+|.|=+ ....+.+++..+-..+.+.-.+.++|.-+=|. +|= +.
T Consensus 25 pl~~~t~~e~l~~a~~~~~~~aD~vElR~D~l~~~~~~~~v~~~l~~lr~~~~~lPiI~T~Rt~~EGG~~~~~~~~~~~l 104 (258)
T 4h3d_A 25 PIIGKNKKDIIKEAKELKDACLDIIEWRVDFFENVENIKEVKEVLYELRSYIHDIPLLFTFRSVVEGGEKLISRDYYTTL 104 (258)
T ss_dssp EECCSSHHHHHHHHHHHTTSSCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCTTSCEEEECCCGGGTCSCCCCHHHHHHH
T ss_pred EeCCCCHHHHHHHHHHHhhcCCCEEEEeeccccccCCHHHHHHHHHHHHHhcCCCCEEEEEechhhCCCCCCCHHHHHHH
Confidence 3333344443 4455556677777633 33344455555444444444567788877543 121 11
Q ss_pred HHHHHhh--cCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHH-HHHHHHHhCc
Q 012943 324 LHSIISA--SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVS-DIAIAVREGA 400 (453)
Q Consensus 324 ldeI~~~--sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~-Dv~nav~~G~ 400 (453)
+.+++.. +|.|=+ |+.. -....+.++..+++.|..+|.+-+=+ ...|+..|+. .+..+...|+
T Consensus 105 l~~~~~~~~~d~iDv-------El~~--~~~~~~~l~~~a~~~~~kiI~S~Hdf-----~~TP~~~el~~~~~~~~~~ga 170 (258)
T 4h3d_A 105 NKEISNTGLVDLIDV-------ELFM--GDEVIDEVVNFAHKKEVKVIISNHDF-----NKTPKKEEIVSRLCRMQELGA 170 (258)
T ss_dssp HHHHHHTTCCSEEEE-------EGGG--CHHHHHHHHHHHHHTTCEEEEEEEES-----SCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHhcCCchhhHH-------hhhc--cHHHHHHHHHHHHhCCCEEEEEEecC-----CCCCCHHHHHHHHHHHHHhCC
Confidence 1222211 343322 2221 13467788899999999999875422 4578877854 4667778899
Q ss_pred cEEEecCcccCCCCHHHHHHHHHHHHH
Q 012943 401 DAVMLSGETAHGKFPLKAVKVMHTVAL 427 (453)
Q Consensus 401 D~vmLs~ETA~G~yP~eaV~~m~~I~~ 427 (453)
|.+=+. ..-+-+.+..+.|.-...
T Consensus 171 DIvKia---~~~~~~~D~l~Ll~~~~~ 194 (258)
T 4h3d_A 171 DLPKIA---VMPQNEKDVLVLLEATNE 194 (258)
T ss_dssp SEEEEE---ECCSSHHHHHHHHHHHHH
T ss_pred CEEEEE---EccCCHHHHHHHHHHHHH
Confidence 987764 233456677777765433
No 371
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=30.25 E-value=2.2e+02 Score=27.63 Aligned_cols=57 Identities=19% Similarity=0.175 Sum_probs=36.4
Q ss_pred CCCEEEEechhhhhccCCCCchHH-HHHHHHHHHhCccEEEecCcccCCCCHHHHHHHHHHHHHHHh
Q 012943 365 QKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (453)
Q Consensus 365 Gkpvi~aTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE 430 (453)
..||+.- .+..+-.| +.-.-.+-..|+|++|+..=--...-+-+.++..+.|+..+.
T Consensus 91 rvpViaG---------vg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~ 148 (315)
T 3si9_A 91 RVPVVAG---------AGSNSTSEAVELAKHAEKAGADAVLVVTPYYNRPNQRGLYTHFSSIAKAIS 148 (315)
T ss_dssp SSCBEEE---------CCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCS
T ss_pred CCcEEEe---------CCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHcCC
Confidence 4677774 33444445 555566777899999986322122335678888888887764
No 372
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=30.15 E-value=81 Score=31.96 Aligned_cols=64 Identities=11% Similarity=0.093 Sum_probs=40.6
Q ss_pred CcEEEEecCCCCCCHH----HHHHHHHhCCcEEEeecCCCC---hHHHHHHHHHHHHHHhhcCCCcEEEEeec
Q 012943 100 KTKIVCTIGPSTSSRE----MIWKLAEEGMNVARLNMSHGD---HASHQKTIDLVKEYNSQFEDKAVAIMLDT 165 (453)
Q Consensus 100 ~TKIi~TiGPss~s~e----~i~~Li~aGmnvaRiNfSHg~---~e~~~~~I~~iR~a~~~~~~~~iaIllDL 165 (453)
+....+|.... .+++ ..+++.+.|.+.+.|.+.||. ....+.-++.++.+.+..+ ..+.|++|.
T Consensus 167 ~v~~y~s~~~~-~~~e~~~~~a~~~~~~Gf~~iKik~g~gp~dg~~~~~~die~v~avReavG-~d~~L~vDa 237 (412)
T 3stp_A 167 RIPVYYSKLYA-GSIEAMQKEAEEAMKGGYKAFKSRFGYGPKDGMPGMRENLKRVEAVREVIG-YDNDLMLEC 237 (412)
T ss_dssp SEEEEEECCCS-CCHHHHHHHHHHHHTTTCSEEEEECCCCGGGHHHHHHHHHHHHHHHHHHHC-SSSEEEEEC
T ss_pred eEEEEEEecCC-CCHHHHHHHHHHHHHcCCCEEEEecccCcccccchHHHHHHHHHHHHHHcC-CCCeEEEEC
Confidence 45666775332 2443 455577789999999999973 1234455566666656665 556777775
No 373
>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis}
Probab=30.15 E-value=61 Score=30.27 Aligned_cols=56 Identities=14% Similarity=0.240 Sum_probs=36.6
Q ss_pred hhhcCCcEEEeccccCHHH--------HHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh----cCEEEEe
Q 012943 276 GVDNQVDFYAVSFVKDAKV--------VHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA----SDGAMVA 337 (453)
Q Consensus 276 a~~~gvd~I~lSfV~sa~d--------v~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~----sDgImIg 337 (453)
|.+.|+++|. |||.+-+| +.++.++++..+.++.|++ .+++|..+|.++ +|.+-+.
T Consensus 119 Aa~AGa~yIS-PfvgRi~d~~~dG~~~v~~i~~~~~~~~~~t~ila-----AS~R~~~~v~~~a~~G~d~~Tip 186 (212)
T 3r8r_A 119 AARAGATYVS-PFLGRLDDIGHNGLDLISEVKQIFDIHGLDTQIIA-----ASIRHPQHVTEAALRGAHIGTMP 186 (212)
T ss_dssp HHHHTCSEEE-EBHHHHHHTTSCHHHHHHHHHHHHHHHTCCCEEEE-----BSCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHcCCeEEE-eccchhhhcCCChHHHHHHHHHHHHHcCCCCEEEE-----ecCCCHHHHHHHHHcCCCEEEcC
Confidence 5578998874 78877655 3455666666666677765 467777777642 5665554
No 374
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=30.12 E-value=4.2e+02 Score=26.26 Aligned_cols=26 Identities=8% Similarity=-0.055 Sum_probs=18.8
Q ss_pred CCCHhhHHHH--------HhhhhcCCcEEEeccc
Q 012943 264 SITDKDWEDI--------KFGVDNQVDFYAVSFV 289 (453)
Q Consensus 264 ~ltekD~~DI--------~~a~~~gvd~I~lSfV 289 (453)
.||..|++.+ +.+.+.|+|+|=+...
T Consensus 150 ~mt~~eI~~ii~~f~~AA~~A~~aGfDgVEih~a 183 (361)
T 3gka_A 150 ALELDEIPGVVAAFRRGAENARAAGFDGVEVHGA 183 (361)
T ss_dssp ECCGGGHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCc
Confidence 5788888777 2346789999977543
No 375
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=30.04 E-value=96 Score=30.45 Aligned_cols=46 Identities=11% Similarity=0.128 Sum_probs=34.1
Q ss_pred HHHHHHH-hCCcEEEeecCCCChHHHHHHHHHHHHHHhhcCCCcEEEEeec
Q 012943 116 MIWKLAE-EGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDT 165 (453)
Q Consensus 116 ~i~~Li~-aGmnvaRiNfSHg~~e~~~~~I~~iR~a~~~~~~~~iaIllDL 165 (453)
..+++++ +|-+.+.|++.|++.+.-.+.++.+|++. + ..+.|++|.
T Consensus 149 ~a~~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~---g-~~~~l~vDa 195 (370)
T 1nu5_A 149 SALEMIETRRHNRFKVKLGARTPAQDLEHIRSIVKAV---G-DRASVRVDV 195 (370)
T ss_dssp HHHHHHHTTSCSEEEEECSSSCHHHHHHHHHHHHHHH---G-GGCEEEEEC
T ss_pred HHHHHHHhCCccEEEEecCCCChHHHHHHHHHHHHhc---C-CCCEEEEEC
Confidence 3466777 99999999999998877777777777653 3 334566774
No 376
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=30.03 E-value=94 Score=27.33 Aligned_cols=59 Identities=14% Similarity=0.198 Sum_probs=40.5
Q ss_pred eeecCCCEEEEEeec--CCC---CccEEEeccccccc---ccccCCEEEEeCCeeEEEEEEEeCCeEEE
Q 012943 179 IILKEGQEFNFTIKR--GVS---TEDTVSVNYDDFVN---DVEVGDILLVDGGMMSLAVKSKTKDLVKC 239 (453)
Q Consensus 179 i~L~~G~~v~lt~~~--~~~---~~~~I~v~~~~l~~---~vk~Gd~IlIDDG~I~L~V~ev~~~~v~~ 239 (453)
.-.+.|++.+++... .+| ......++-..|.. .+++|+.+.+++ . ..+|+++.++.|..
T Consensus 62 ~gm~~Ge~~~v~Ipp~~aYG~~~~~~V~~v~~~~f~~~~~~~~~G~~~~~~~-~-~~~V~~v~~~~V~v 128 (157)
T 3pr9_A 62 LEMDVGEEREVVLPPEKAFGKRDPSKIKLIPLSEFTKRGIKPIKGLTITIDG-I-PGKIVSINSGRVLV 128 (157)
T ss_dssp HHCCTTCEEEEEECGGGTTCCCCGGGEEEEEHHHHHHTTCCCCTTCEEEETT-E-EEEEEEEETTEEEE
T ss_pred cCCCCCCEEEEEECcHHhcCCCChHhEEEcCHHHCCcccCCcCCCcEEEecC-C-CeEEEEEcCCEEEE
Confidence 357899999998763 333 33456666666764 257799999864 3 46788888887654
No 377
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=29.93 E-value=2e+02 Score=26.08 Aligned_cols=107 Identities=5% Similarity=-0.026 Sum_probs=56.4
Q ss_pred HHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh----cCEEEEeCCCccccC-
Q 012943 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA----SDGAMVARGDLGAEL- 345 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~----sDgImIgRGDLg~el- 345 (453)
++++.+++.|+|||..|. .+. ++.+. ..+.+ +.++.-+ .+..|+.++ +|.+-+-++. .+
T Consensus 74 d~~~~A~~~GAd~v~~~~-~d~-~v~~~---~~~~g--~~~i~G~------~t~~e~~~A~~~Gad~v~~fpa~---~~g 137 (207)
T 2yw3_A 74 KEAEAALEAGAAFLVSPG-LLE-EVAAL---AQARG--VPYLPGV------LTPTEVERALALGLSALKFFPAE---PFQ 137 (207)
T ss_dssp HHHHHHHHHTCSEEEESS-CCH-HHHHH---HHHHT--CCEEEEE------CSHHHHHHHHHTTCCEEEETTTT---TTT
T ss_pred HHHHHHHHcCCCEEEcCC-CCH-HHHHH---HHHhC--CCEEecC------CCHHHHHHHHHCCCCEEEEecCc---ccc
Confidence 556677888999998773 333 33222 22223 3344434 445555543 7888774311 11
Q ss_pred CCCCHHHHHHHHHHHHHHc-CCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccCCC
Q 012943 346 PIEDVPLLQEDIIRRCRSM-QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGK 413 (453)
Q Consensus 346 g~e~v~~aqk~Ii~~c~~a-Gkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~ 413 (453)
|+ ...+ ..+... +.|++-+ .+. +. .++..++..|+|++...+.-..++
T Consensus 138 G~----~~lk---~l~~~~~~ipvvai---------GGI-~~---~n~~~~l~aGa~~vavgSai~~~d 186 (207)
T 2yw3_A 138 GV----RVLR---AYAEVFPEVRFLPT---------GGI-KE---EHLPHYAALPNLLAVGGSWLLQGN 186 (207)
T ss_dssp HH----HHHH---HHHHHCTTCEEEEB---------SSC-CG---GGHHHHHTCSSBSCEEESGGGSSC
T ss_pred CH----HHHH---HHHhhCCCCcEEEe---------CCC-CH---HHHHHHHhCCCcEEEEehhhhCCC
Confidence 21 1112 223334 6776642 222 21 245678889999998766543444
No 378
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=29.84 E-value=48 Score=32.57 Aligned_cols=46 Identities=20% Similarity=0.335 Sum_probs=35.0
Q ss_pred EecCCCCCCHHHHHHHHHhC--CcEEEeecCCCChHHHHHHHHHHHHH
Q 012943 105 CTIGPSTSSREMIWKLAEEG--MNVARLNMSHGDHASHQKTIDLVKEY 150 (453)
Q Consensus 105 ~TiGPss~s~e~i~~Li~aG--mnvaRiNfSHg~~e~~~~~I~~iR~a 150 (453)
+-+|...+..+..+.++++| .+..-+|++||+.....+.|+.+|+.
T Consensus 99 v~~g~~~~~~~~a~~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~~ 146 (336)
T 1ypf_A 99 ISVGVKEDEYEFVQQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKKH 146 (336)
T ss_dssp EEECCSHHHHHHHHHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHHH
T ss_pred EeCCCCHHHHHHHHHHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHHh
Confidence 33555444567788899999 99999999999887777777777754
No 379
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*
Probab=29.68 E-value=83 Score=29.59 Aligned_cols=61 Identities=16% Similarity=0.260 Sum_probs=40.3
Q ss_pred hhhhcCCcEEEeccccCHHH--------HHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh----cCEEEEeCCCc
Q 012943 275 FGVDNQVDFYAVSFVKDAKV--------VHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA----SDGAMVARGDL 341 (453)
Q Consensus 275 ~a~~~gvd~I~lSfV~sa~d--------v~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~----sDgImIgRGDL 341 (453)
.|.+.|+++|. |||.+-+| +.++.++++..+.++.|++ .+++|..+|.++ +|.+-+.+.-|
T Consensus 120 ~Aa~AGa~yIS-PfvgRi~d~g~dG~~~v~~i~~~~~~~~~~T~Ila-----AS~Rn~~~v~~aa~~G~d~~Tip~~vl 192 (223)
T 3s1x_A 120 LAAKAGVTYVS-PFVGRLDDIGEDGMQIIDMIRTIFNNYIIKTQILV-----ASIRNPIHVLRSAVIGADVVTVPFNVL 192 (223)
T ss_dssp HHHHTTCSEEE-EBSHHHHHTTSCTHHHHHHHHHHHHHTTCCSEEEE-----BSCCSHHHHHHHHHHTCSEEEECHHHH
T ss_pred HHHHcCCeEEE-eecchHhhcCCCHHHHHHHHHHHHHHcCCCCEEEE-----EeCCCHHHHHHHHHcCCCEEEeCHHHH
Confidence 35578999874 78876654 4456666777676777775 467777777752 67776654433
No 380
>4djd_C C/Fe-SP, corrinoid/iron-sulfur protein large subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_C* 4djf_C*
Probab=29.65 E-value=1.6e+02 Score=30.43 Aligned_cols=124 Identities=19% Similarity=0.117 Sum_probs=72.7
Q ss_pred hhHHHHHhhhhcCCcE--EEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh--cCEEEEeCCCccc
Q 012943 268 KDWEDIKFGVDNQVDF--YAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA--SDGAMVARGDLGA 343 (453)
Q Consensus 268 kD~~DI~~a~~~gvd~--I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~--sDgImIgRGDLg~ 343 (453)
+|-+-++.|++.+.+. +..|. +.+.++.+.....+.+- .++++=...+.+..+-+++.. .+-|++.+|=
T Consensus 163 ~dpevleaALea~a~~~plI~sa--t~dn~e~m~~lAa~y~~--pVi~~~~dl~~lkelv~~a~~~GI~~IvLDPG~--- 235 (446)
T 4djd_C 163 DDPDVLKEALAGVADRKPLLYAA--TGANYEAMTALAKENNC--PLAVYGNGLEELAELVDKIVALGHKQLVLDPGA--- 235 (446)
T ss_dssp SCHHHHHHHHGGGGGGCCEEEEE--CTTTHHHHHHHHHHTTC--CEEEECSSHHHHHHHHHHHHHTTCCCEEEECCC---
T ss_pred CCHHHHHHHHHhhcCcCCeeEec--chhhHHHHHHHHHHcCC--cEEEEeccHHHHHHHHHHHHHCCCCcEEECCCc---
Confidence 5777788887766553 22232 35566666666655544 455554444444444444433 3456666553
Q ss_pred cCCCCCHHHHHHHHHHHH-----HHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecC
Q 012943 344 ELPIEDVPLLQEDIIRRC-----RSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (453)
Q Consensus 344 elg~e~v~~aqk~Ii~~c-----~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 407 (453)
-|+.+....+.+|-++| +..|-|+++.|- ....|-|.+-.+-++..|+|.+.+..
T Consensus 236 -~g~~~t~~~~~~iRr~AL~~~d~~LgyPvi~~~s--------r~d~~~E~t~A~~~i~kga~Iv~vhd 295 (446)
T 4djd_C 236 -RETSRAIADFTQIRRLAIKKRFRSFGYPIIALTT--------AANPLDEVLQAVNYVTKYASLVVLRT 295 (446)
T ss_dssp -CSHHHHHHHHHHHHHHHHHSCCGGGCSCBEEECC--------CSSHHHHHHHHHHHHHTTCSEEEESC
T ss_pred -hhHHHHHHHHHHHHHHhhhccCcccCCCEEeccC--------CccHHHHHHHHHHHHHcCCeEEEEcC
Confidence 13334444444552332 347999998762 14467787777899999999999964
No 381
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A*
Probab=29.60 E-value=80 Score=29.75 Aligned_cols=51 Identities=10% Similarity=0.220 Sum_probs=31.8
Q ss_pred CHHHHHHHHHhCCcEEEeecCCC---------C--hHHHHHHHHHHHHHHhhcCCCcEEEEeecCC
Q 012943 113 SREMIWKLAEEGMNVARLNMSHG---------D--HASHQKTIDLVKEYNSQFEDKAVAIMLDTKG 167 (453)
Q Consensus 113 s~e~i~~Li~aGmnvaRiNfSHg---------~--~e~~~~~I~~iR~a~~~~~~~~iaIllDLkG 167 (453)
+.+.++.|.+.|+|.+|+-++.. . .+..+.+-+.|.. .++.| +.+++|+-+
T Consensus 35 ~~~d~~~l~~~G~n~vR~~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~-a~~~G---i~vild~h~ 96 (317)
T 3aof_A 35 KDEFFDIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVING-ALKRG---LAVVINIHH 96 (317)
T ss_dssp CTHHHHHHHHHTCSEEEECCCGGGGBCSSTTCCBCHHHHHHHHHHHHH-HHHTT---CEEEEECCC
T ss_pred CHHHHHHHHHcCCCEEEEeccHHHhcCCCCCCcCCHHHHHHHHHHHHH-HHHCC---CEEEEEecC
Confidence 56789999999999999976621 1 2223333333333 33444 677888854
No 382
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=29.58 E-value=2.3e+02 Score=27.46 Aligned_cols=90 Identities=16% Similarity=0.179 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhhcCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEe
Q 012943 293 KVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVAT 372 (453)
Q Consensus 293 ~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aT 372 (453)
+.++.++++.++. .+.++.-+-.++.++ .+.+.+|.+-||.+++- ..+ +++++.+.||||++.|
T Consensus 78 ~GL~~L~~~~~e~--Glp~~Tev~d~~~v~---~l~~~vd~lqIgA~~~~------n~~-----LLr~va~~gkPVilK~ 141 (285)
T 3sz8_A 78 EGLKIFAEVKARF--GVPVITDVHEAEQAA---PVAEIADVLQVPAFLAR------QTD-----LVVAIAKAGKPVNVKK 141 (285)
T ss_dssp HHHHHHHHHHHHH--CCCEEEECCSGGGHH---HHHTTCSEEEECGGGTT------CHH-----HHHHHHHTSSCEEEEC
T ss_pred HHHHHHHHHHHhc--CCeEEEEeCCHHHHH---HHHHhCCEEEECccccC------CHH-----HHHHHHccCCcEEEeC
Confidence 5566677777654 466777777766664 44556999999866553 333 5555668999999964
Q ss_pred chhhhhccCCCCchHHHHHHHHHHH-hCccEEEec
Q 012943 373 NMLESMIDHPTPTRAEVSDIAIAVR-EGADAVMLS 406 (453)
Q Consensus 373 qmLeSM~~~~~PtrAEv~Dv~nav~-~G~D~vmLs 406 (453)
.|- .|..|+..++..+. .|.+-++|.
T Consensus 142 G~~--------~t~~ei~~ave~i~~~Gn~~i~L~ 168 (285)
T 3sz8_A 142 PQF--------MSPTQLKHVVSKCGEVGNDRVMLC 168 (285)
T ss_dssp CTT--------SCGGGTHHHHHHHHHTTCCCEEEE
T ss_pred CCC--------CCHHHHHHHHHHHHHcCCCcEEEE
Confidence 432 46667777767665 476666664
No 383
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=29.43 E-value=1.9e+02 Score=26.84 Aligned_cols=65 Identities=17% Similarity=0.263 Sum_probs=45.0
Q ss_pred HHHHHHHHhcCCCceEEEEecChhhhccHHHHHhhcCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 012943 296 HELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (453)
Q Consensus 296 ~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~a 371 (453)
..+++.+.+.+..+.+-+.-+... -+|++++++..|.|+-+-.+ ...+..+-+.|++.++|.+.+
T Consensus 85 ~~~~~~l~~~np~~~v~~~~~~~~-~~~~~~~~~~~DvVi~~~d~----------~~~r~~l~~~~~~~~~p~i~~ 149 (251)
T 1zud_1 85 QVSQQRLTQLNPDIQLTALQQRLT-GEALKDAVARADVVLDCTDN----------MATRQEINAACVALNTPLITA 149 (251)
T ss_dssp HHHHHHHHHHCTTSEEEEECSCCC-HHHHHHHHHHCSEEEECCSS----------HHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHCCCCEEEEEeccCC-HHHHHHHHhcCCEEEECCCC----------HHHHHHHHHHHHHhCCCEEEE
Confidence 445667777787777665433322 26788888888988876322 235778888999999997765
No 384
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=29.35 E-value=1.9e+02 Score=28.56 Aligned_cols=131 Identities=16% Similarity=0.228 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh-cCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCE---
Q 012943 293 KVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPV--- 368 (453)
Q Consensus 293 ~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~-sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpv--- 368 (453)
..+..+.....+...+++|..........+.+.+-+.. ..-+||... ++++++=...-+++++.|++.|..|
T Consensus 60 ~~~~~~v~~aa~~~~~VPValHlDHg~~~e~i~~ai~~GFtSVMiDgS----~~p~eENi~~Tk~vv~~ah~~gvsVEaE 135 (323)
T 2isw_A 60 IYLKKLCEAALEKHPDIPICIHLDHGDTLESVKMAIDLGFSSVMIDAS----HHPFDENVRITKEVVAYAHARSVSVEAE 135 (323)
T ss_dssp HHHHHHHHHHHHHCTTSCEEEEEEEECSHHHHHHHHHTTCSEEEECCT----TSCHHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEECCCCCCHHHHHHHHHcCCCeEEecCC----CCCHHHHHHHHHHHHHHHHHcCCeEEEE
Q ss_pred -EEEechhhhhccCCCCchHHHHHHHHHH-HhCccEEEecCcccCCCCH--HHHH-----HHHHHHHHHH
Q 012943 369 -IVATNMLESMIDHPTPTRAEVSDIAIAV-REGADAVMLSGETAHGKFP--LKAV-----KVMHTVALRT 429 (453)
Q Consensus 369 -i~aTqmLeSM~~~~~PtrAEv~Dv~nav-~~G~D~vmLs~ETA~G~yP--~eaV-----~~m~~I~~~a 429 (453)
+.-...=+.. ...-......++..++ .-|+|++-.+--|+.|.|+ -+.- ..|.+|-...
T Consensus 136 LG~vgg~Ed~v--~~~~~yTdPeea~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~~~L~~~~L~~I~~~~ 203 (323)
T 2isw_A 136 LGTLGGIEEDV--QNTVQLTEPQDAKKFVELTGVDALAVAIGTSHGAYKFKSESDIRLAIDRVKTISDLT 203 (323)
T ss_dssp ESCC------------CCCCCHHHHHHHHHHHCCSEEEECSSCCSSSBCCCC----CCCCHHHHHHHHHH
T ss_pred eCCccCCccCc--ccccccCCHHHHHHHHHHHCCCEEEEecCccccccCCCCCcccccCHHHHHHHHHHh
No 385
>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3
Probab=29.24 E-value=1.4e+02 Score=27.48 Aligned_cols=57 Identities=16% Similarity=0.117 Sum_probs=41.8
Q ss_pred HHHH-HHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHH-HHHhCccEEEecCcccCCCCHHHHHHHHHHHH
Q 012943 350 VPLL-QEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAI-AVREGADAVMLSGETAHGKFPLKAVKVMHTVA 426 (453)
Q Consensus 350 v~~a-qk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~n-av~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~ 426 (453)
...+ -...++.++++|++|.+-|- + .| .+... ++..|+|+++- .||..+.+.+++.+
T Consensus 178 ~~~~~~~~~v~~~~~~G~~v~~wTv------n--~~-----~~~~~~l~~~GvdgIiT-------D~p~~~~~~~~~~~ 236 (248)
T 1zcc_A 178 PAQMRRPGIIEASRKAGLEIMVYYG------G--DD-----MAVHREIATSDVDYINL-------DRPDLFAAVRSGMA 236 (248)
T ss_dssp HHHHHSHHHHHHHHHHTCEEEEECC------C--CC-----HHHHHHHHHSSCSEEEE-------SCHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHCCCEEEEECC------C--CH-----HHHHHHHHHcCCCEEEE-------CCHHHHHHHHHHhc
Confidence 3444 57889999999999998761 1 22 34556 77889999886 48988888777544
No 386
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=29.23 E-value=2e+02 Score=27.85 Aligned_cols=57 Identities=23% Similarity=0.160 Sum_probs=36.9
Q ss_pred CCCEEEEechhhhhccCCCCchHH-HHHHHHHHHhCccEEEecCcccCCCCHHHHHHHHHHHHHHHh
Q 012943 365 QKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (453)
Q Consensus 365 Gkpvi~aTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE 430 (453)
..|||.- .+..+-.| +.-.-.+-..|+|++|+..=--...-+-+.++..+.|+..+.
T Consensus 93 rvpViaG---------vg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~ 150 (315)
T 3na8_A 93 RVPTIVS---------VSDLTTAKTVRRAQFAESLGAEAVMVLPISYWKLNEAEVFQHYRAVGEAIG 150 (315)
T ss_dssp SSCBEEE---------CCCSSHHHHHHHHHHHHHTTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCS
T ss_pred CCcEEEe---------cCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 3677764 33444445 555556677899999985332233346788889999987765
No 387
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=29.22 E-value=20 Score=33.72 Aligned_cols=36 Identities=14% Similarity=0.105 Sum_probs=27.6
Q ss_pred HHHHHHhCccEEEecCcccCCCCHHHHHHHHHHHHH
Q 012943 392 IAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVAL 427 (453)
Q Consensus 392 v~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~ 427 (453)
...++..|+|.+....---...-|.++++.+++.+.
T Consensus 201 ~~~a~~aGad~iVvGr~I~~a~dp~~a~~~l~~~i~ 236 (246)
T 2yyu_A 201 PRKARALGSDYIVIGRSLTRAADPLRTYARLQHEWN 236 (246)
T ss_dssp HHHHHHHTCSEEEECHHHHTSSSHHHHHHHHHHHCC
T ss_pred HHHHHHcCCCEEEECHhhcCCCCHHHHHHHHHHHHH
Confidence 557788999999887555556679999999877554
No 388
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=29.17 E-value=3.2e+02 Score=25.29 Aligned_cols=38 Identities=13% Similarity=0.142 Sum_probs=25.8
Q ss_pred HHHHhhhhcCCcEEEecccc------CHHHHHHHHHHHHhcCCC
Q 012943 271 EDIKFGVDNQVDFYAVSFVK------DAKVVHELKDYLKSCNAD 308 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lSfV~------sa~dv~~v~~~L~~~~~~ 308 (453)
+.++.+.+.|.|+|-+.+.. ...++.++++.+++.|-.
T Consensus 40 ~~l~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 83 (296)
T 2g0w_A 40 KRVKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMK 83 (296)
T ss_dssp HHHHHHHHTTCSEEEEEHHHHHHHHHTTCCHHHHHHHHHHTTCE
T ss_pred HHHHHHHHcCCCEEEeCHHHHHHHHhcCCcHHHHHHHHHHcCCc
Confidence 45677788999999887531 234566677777776544
No 389
>3ddy_A Lumazine protein, LUMP; luminescent bacteria, lumazine PR riboflavin synthase, luminescence, luminescent protein; HET: RBF; 2.50A {Photobacterium leiognathi}
Probab=29.09 E-value=1.4e+02 Score=27.16 Aligned_cols=55 Identities=22% Similarity=0.275 Sum_probs=41.1
Q ss_pred EEEeccc-ccccccccCCEEEEeCCeeEEEEEEEeCCeEEEEEe------eCcEecccceeecC
Q 012943 200 TVSVNYD-DFVNDVEVGDILLVDGGMMSLAVKSKTKDLVKCIVV------DGGELKSRRHLNVR 256 (453)
Q Consensus 200 ~I~v~~~-~l~~~vk~Gd~IlIDDG~I~L~V~ev~~~~v~~~V~------ngG~L~s~KgVnlp 256 (453)
.+.+..+ .+.++++.||.|-+|. ++|+|.+++++.+.+.+. +=|.++....|||.
T Consensus 23 ~l~i~~~~~~~~~~~~GdSIAvnG--vCLTV~~~~~~~f~vdv~ETl~~T~Lg~l~~G~~VNLE 84 (186)
T 3ddy_A 23 RHGIAFPEGMFQLVDVDTVMLVNG--CSNTVVRILGDMVYFDIDQALGTTTFDGLKEGDQVNLE 84 (186)
T ss_dssp EEEEECCTTTGGGCCTTCEEEETT--EEEEEEEEETTEEEEEECTTTTTSSGGGCCTTCEEEEE
T ss_pred EEEEEeChHHhccCCCCCeEEEee--EEEEEEEEcCCEEEEEhHHhhhhCchhhcCCCCEEEEC
Confidence 4555443 5788999999999986 889999999999888871 12445566677774
No 390
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=29.09 E-value=44 Score=29.12 Aligned_cols=58 Identities=19% Similarity=0.267 Sum_probs=40.3
Q ss_pred eecCCCEEEEEeec--CCC---CccEEEeccccccc---ccccCCEEEEeCCeeEEEEEEEeCCeEEE
Q 012943 180 ILKEGQEFNFTIKR--GVS---TEDTVSVNYDDFVN---DVEVGDILLVDGGMMSLAVKSKTKDLVKC 239 (453)
Q Consensus 180 ~L~~G~~v~lt~~~--~~~---~~~~I~v~~~~l~~---~vk~Gd~IlIDDG~I~L~V~ev~~~~v~~ 239 (453)
-++.|++.+++... .+| ......++-..|.. .+++|+.+.+.+ +..+|.++.++.|..
T Consensus 64 gm~~Ge~~~v~ipp~~aYG~~~~~~v~~v~~~~f~~~~~~~~~G~~~~~~~--~~~~V~~v~~~~v~v 129 (151)
T 1ix5_A 64 DMEVGDEKTVKIPAEKAYGNRNEMLIQKIPRDAFKEADFEPEEGMVILAEG--IPATITEVTDNEVTL 129 (151)
T ss_dssp TCCTTCCCEEEECTTTSSCSCCSTTBCCEETHHHHTSTTCCCTTEEEESSS--CEEEEEEEETTEEEE
T ss_pred CCCCCCEEEEEECcHHHCCCCCccEEEEEEHHHcCccCCcccccCEEEECC--eEEEEEEEcCCEEEE
Confidence 46789988888763 222 22344455555654 589999999887 777899999887653
No 391
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=28.88 E-value=1.8e+02 Score=26.08 Aligned_cols=95 Identities=11% Similarity=-0.007 Sum_probs=53.4
Q ss_pred HHHHHhhhhcCCcEEEecccc-CHHHHHHHHHHHHhcC--CCceEEEEecChhhhccHHHHHh-h-cCEEEEeCCCcccc
Q 012943 270 WEDIKFGVDNQVDFYAVSFVK-DAKVVHELKDYLKSCN--ADIHVIVKIESADSIPNLHSIIS-A-SDGAMVARGDLGAE 344 (453)
Q Consensus 270 ~~DI~~a~~~gvd~I~lSfV~-sa~dv~~v~~~L~~~~--~~i~IIakIET~~gv~NldeI~~-~-sDgImIgRGDLg~e 344 (453)
.+.++.+++.|+++|.+..-. +.+++. +.+.+.- ....++.. ++. +++. . +||+-++..|+...
T Consensus 16 ~~~~~~a~~~Gv~~v~lr~k~~~~~~~~---~~i~~l~~~~~~~livn-------d~~-~~A~~~gadgvhl~~~~~~~~ 84 (210)
T 3ceu_A 16 DKIITALFEEGLDILHLRKPETPAMYSE---RLLTLIPEKYHRRIVTH-------EHF-YLKEEFNLMGIHLNARNPSEP 84 (210)
T ss_dssp HHHHHHHHHTTCCEEEECCSSCCHHHHH---HHHHHSCGGGGGGEEES-------SCT-THHHHTTCSEEECCSSSCSCC
T ss_pred HHHHHHHHHCCCCEEEEccCCCCHHHHH---HHHHHHHHHhCCeEEEe-------CCH-HHHHHcCCCEEEECccccccc
Confidence 577888899999999887421 233333 3333321 23445542 223 3333 3 79999988777322
Q ss_pred CCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecC
Q 012943 345 LPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (453)
Q Consensus 345 lg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 407 (453)
.. .++.++..+ -|..| +..+. .|+|.+.++.
T Consensus 85 ~~-----------------~~~~ig~s~-----------~t~~e---~~~A~-~GaDyv~~g~ 115 (210)
T 3ceu_A 85 HD-----------------YAGHVSCSC-----------HSVEE---VKNRK-HFYDYVFMSP 115 (210)
T ss_dssp TT-----------------CCSEEEEEE-----------CSHHH---HHTTG-GGSSEEEECC
T ss_pred cc-----------------cCCEEEEec-----------CCHHH---HHHHh-hCCCEEEECC
Confidence 11 255555542 13333 44555 7999998754
No 392
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=28.86 E-value=1.5e+02 Score=29.21 Aligned_cols=46 Identities=9% Similarity=0.253 Sum_probs=34.5
Q ss_pred HHHHHHHhCCcEEEeecCCCChHHHHHHHHHHHHHHhhcCCCcEEEEeec
Q 012943 116 MIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDT 165 (453)
Q Consensus 116 ~i~~Li~aGmnvaRiNfSHg~~e~~~~~I~~iR~a~~~~~~~~iaIllDL 165 (453)
..+++.++|-+.+.+...|++.+.-.+.++.+|++. + ..+.|++|.
T Consensus 146 ~a~~~~~~Gf~~vKik~g~~~~~~d~e~v~avR~a~---G-~d~~l~vDa 191 (382)
T 2gdq_A 146 NVEAQLKKGFEQIKVKIGGTSFKEDVRHINALQHTA---G-SSITMILDA 191 (382)
T ss_dssp HHHHHHTTTCCEEEEECSSSCHHHHHHHHHHHHHHH---C-TTSEEEEEC
T ss_pred HHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHhh---C-CCCEEEEEC
Confidence 355677899999999999988877777777777653 4 445677775
No 393
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=28.79 E-value=2.7e+02 Score=26.78 Aligned_cols=56 Identities=20% Similarity=0.101 Sum_probs=33.6
Q ss_pred CCCEEEEechhhhhccCCCCchHH-HHHHHHHHHhCccEEEecCcccC----CCCHHHHHHHHHHHHHHHh
Q 012943 365 QKPVIVATNMLESMIDHPTPTRAE-VSDIAIAVREGADAVMLSGETAH----GKFPLKAVKVMHTVALRTE 430 (453)
Q Consensus 365 Gkpvi~aTqmLeSM~~~~~PtrAE-v~Dv~nav~~G~D~vmLs~ETA~----G~yP~eaV~~m~~I~~~aE 430 (453)
..||+.. .+..+-+| +.-.-.+-..|+|++|+..= -. ..-+-+.++..+.|+..+.
T Consensus 77 rvpviaG---------vg~~~t~~ai~la~~A~~~Gadavlv~~P-yy~~~~~~s~~~l~~~f~~va~a~~ 137 (309)
T 3fkr_A 77 RVPVIVT---------TSHYSTQVCAARSLRAQQLGAAMVMAMPP-YHGATFRVPEAQIFEFYARVSDAIA 137 (309)
T ss_dssp SSCEEEE---------CCCSSHHHHHHHHHHHHHTTCSEEEECCS-CBTTTBCCCHHHHHHHHHHHHHHCS
T ss_pred CCcEEEe---------cCCchHHHHHHHHHHHHHcCCCEEEEcCC-CCccCCCCCHHHHHHHHHHHHHhcC
Confidence 3577764 23344444 54455666778888888531 11 1125677888888877664
No 394
>2aam_A Hypothetical protein TM1410; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE UNL; 2.20A {Thermotoga maritima} SCOP: c.1.8.15
Probab=28.76 E-value=1.4e+02 Score=29.18 Aligned_cols=93 Identities=14% Similarity=0.149 Sum_probs=52.0
Q ss_pred HHhhhhcCCcEEEeccccCHH---------------HHHH----HHHHHHhcCCCceEEEEecChhhhccHH----HHHh
Q 012943 273 IKFGVDNQVDFYAVSFVKDAK---------------VVHE----LKDYLKSCNADIHVIVKIESADSIPNLH----SIIS 329 (453)
Q Consensus 273 I~~a~~~gvd~I~lSfV~sa~---------------dv~~----v~~~L~~~~~~i~IIakIET~~gv~Nld----eI~~ 329 (453)
++.+++.|+|+|.+=-+.+.. +... +.+++.+.+....|+.+ .|.+-++ +++.
T Consensus 128 l~~~~~kG~DGvflDnvD~y~~~~~~~g~~~~~~~~~~~~~i~~La~~ar~~~P~~~ii~n----NG~~i~~~d~~~l~~ 203 (309)
T 2aam_A 128 LDRVIDQGFKGIYLDRIDSFEYWAQEGVISRRSAARKMINFVLEIAEYVRERKPDMLIIPQ----NGENILDFDDGQLAS 203 (309)
T ss_dssp HHHHHHTTCSEEEEECTTHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEB----SCGGGGGGCCSHHHH
T ss_pred HHHHHHcCCCeEeecccchhhhccccCCcchhhhHHHHHHHHHHHHHHHHhhCCCcEEEEe----cCHHhhcccHhHHHh
Confidence 456678999999987664332 2222 22223555666666654 3444455 6777
Q ss_pred hcCEEEEeCCCccccCCC---CCHHHHHHHHHHHHHHcCCCEEEE
Q 012943 330 ASDGAMVARGDLGAELPI---EDVPLLQEDIIRRCRSMQKPVIVA 371 (453)
Q Consensus 330 ~sDgImIgRGDLg~elg~---e~v~~aqk~Ii~~c~~aGkpvi~a 371 (453)
..||++.- ++...-.. +.-......-+..++++||||+..
T Consensus 204 ~id~v~~E--s~~~~~~~~~~~~e~~~~~~~l~~~~~~GkpV~~i 246 (309)
T 2aam_A 204 TVSGWAVE--NLFYLKTIPLEENETKSRLEYLIRLNRKGKFILSV 246 (309)
T ss_dssp HCSEEEEE--SSSEETTEECCHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred hcCEEEee--eEEecCCCCCCHHHHHHHHHHHHHHHHcCCcEEEE
Confidence 78988763 33321111 111112234455677889999974
No 395
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=28.73 E-value=50 Score=28.29 Aligned_cols=42 Identities=5% Similarity=0.014 Sum_probs=32.0
Q ss_pred cCE--EEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEe
Q 012943 331 SDG--AMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVAT 372 (453)
Q Consensus 331 sDg--ImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aT 372 (453)
.|. |++|-.|+....+.++.....+.++..+++.|.++++.|
T Consensus 63 pd~Vii~~G~ND~~~~~~~~~~~~~l~~li~~~~~~~~~vil~~ 106 (190)
T 1ivn_A 63 PRWVLVELGGNDGLRGFQPQQTEQTLRQILQDVKAANAEPLLMQ 106 (190)
T ss_dssp CSEEEEECCTTTTSSSCCHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCEEEEEeeccccccCCCHHHHHHHHHHHHHHHHHcCCCEEEEe
Confidence 564 455666887666667777888999999999998888764
No 396
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=28.61 E-value=2.2e+02 Score=26.21 Aligned_cols=123 Identities=16% Similarity=0.201 Sum_probs=70.6
Q ss_pred cEEEeccccC-HHHHHHHHHHHHhcCCCceEEEEecChhhh----ccHHHHHhh--cCEEEEeCCCccccCCCCCHHHHH
Q 012943 282 DFYAVSFVKD-AKVVHELKDYLKSCNADIHVIVKIESADSI----PNLHSIISA--SDGAMVARGDLGAELPIEDVPLLQ 354 (453)
Q Consensus 282 d~I~lSfV~s-a~dv~~v~~~L~~~~~~i~IIakIET~~gv----~NldeI~~~--sDgImIgRGDLg~elg~e~v~~aq 354 (453)
|++.+.-.-. .+-+..+.++..+.+..+.++...-.+... ..+...+.. .||++.+. .+ +..-
T Consensus 80 d~vTVh~~~G~~~~~~~a~~~~~~~~~~v~vLts~s~~~~~~~~~~~~a~~a~~~g~~GvV~sa---------t~-p~e~ 149 (222)
T 4dbe_A 80 NSFIAHSFIGVKGSLDELKRYLDANSKNLYLVAVMSHEGWSTLFADYIKNVIREISPKGIVVGG---------TK-LDHI 149 (222)
T ss_dssp SEEEEESTTCTTTTHHHHHHHHHHTTCEEEEEEECSSTTCCCTTHHHHHHHHHHHCCSEEEECT---------TC-HHHH
T ss_pred CEEEEEcCcCcHHHHHHHHHHHHhcCCcEEEEEeCCCcchHHHHHHHHHHHHHHhCCCEEEECC---------CC-HHHH
Confidence 8887754333 455666777776666666666666655442 334444433 68887742 11 1111
Q ss_pred HHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccCCCCHHHHHHHHHHHHHH
Q 012943 355 EDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALR 428 (453)
Q Consensus 355 k~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~ 428 (453)
+.|- ...|...++. + .-.|. -.+...++..|+|.++...--..-+.|.++.+.+.+-+.+
T Consensus 150 ~~ir---~~~~~~~~vt-P-------GI~~~---g~tp~~a~~~Gad~iVVGR~I~~A~dP~~aa~~i~~~i~~ 209 (222)
T 4dbe_A 150 TQYR---RDFEKMTIVS-P-------GMGSQ---GGSYGDAVCAGADYEIIGRSIYNAGNPLTALRTINKIIED 209 (222)
T ss_dssp HHHH---HHCTTCEEEE-C-------CBSTT---SBCTTHHHHHTCSEEEECHHHHTSSSHHHHHHHHHHHHHH
T ss_pred HHHH---HhCCCCEEEc-C-------CcccC---ccCHHHHHHcCCCEEEECHHhcCCCCHHHHHHHHHHHHHH
Confidence 1111 1234444442 1 11222 1134467889999999988777889999999877766654
No 397
>2e6z_A Transcription elongation factor SPT5; KOW motif, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.42 E-value=51 Score=24.32 Aligned_cols=46 Identities=15% Similarity=0.120 Sum_probs=30.6
Q ss_pred ccccCCEEEEeCCe---eEEEEEEEeCCeEEEEEeeCcEecccceeecCCCc
Q 012943 211 DVEVGDILLVDGGM---MSLAVKSKTKDLVKCIVVDGGELKSRRHLNVRGKS 259 (453)
Q Consensus 211 ~vk~Gd~IlIDDG~---I~L~V~ev~~~~v~~~V~ngG~L~s~KgVnlp~~~ 259 (453)
.+++||.|.+-+|- +.-+|.+++.+.++..+...|. . ..+.+|...
T Consensus 7 ~f~~GD~V~V~~Gpf~g~~G~V~evd~e~v~V~v~~fg~-~--tpvel~~~q 55 (59)
T 2e6z_A 7 GFQPGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDL-K--DMLEFPAQE 55 (59)
T ss_dssp SCCTTSEEEECSSTTTTCEEEECCCBTTEEEEEECCSSC-C--SCEEEETTT
T ss_pred cCCCCCEEEEeecCCCCCEEEEEEEeCCEEEEEEEecCC-C--ceEEEcHHH
Confidence 45788888888884 5778888888766666655554 1 255555443
No 398
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=28.24 E-value=3.5e+02 Score=24.85 Aligned_cols=114 Identities=19% Similarity=0.216 Sum_probs=59.3
Q ss_pred hhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhhcCE-EEEeC-CC-ccccCCCCCHHH
Q 012943 276 GVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDG-AMVAR-GD-LGAELPIEDVPL 352 (453)
Q Consensus 276 a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~sDg-ImIgR-GD-Lg~elg~e~v~~ 352 (453)
+.+.|+|+|.++-. ..+++..+.+.+.+.|-. .+..+-.....+.+.++.+..++ +.+.. .. -|..-+.. +.
T Consensus 114 a~~aGadgv~v~d~-~~~~~~~~~~~~~~~g~~--~i~~~a~~t~~e~~~~~~~~~~g~v~~~s~~G~tG~~~~~~--~~ 188 (262)
T 1rd5_A 114 MKEAGVHGLIVPDL-PYVAAHSLWSEAKNNNLE--LVLLTTPAIPEDRMKEITKASEGFVYLVSVNGVTGPRANVN--PR 188 (262)
T ss_dssp HHHTTCCEEECTTC-BTTTHHHHHHHHHHTTCE--ECEEECTTSCHHHHHHHHHHCCSCEEEECSSCCBCTTSCBC--TH
T ss_pred HHHcCCCEEEEcCC-ChhhHHHHHHHHHHcCCc--eEEEECCCCCHHHHHHHHhcCCCeEEEecCCCCCCCCcCCC--ch
Confidence 56789999888643 334566666666665543 23333233334566777766553 43332 11 12211221 11
Q ss_pred HHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEec
Q 012943 353 LQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (453)
Q Consensus 353 aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (453)
....+-+..+..+.|+++. .+.-|. .++..+...|+|++...
T Consensus 189 ~~~~i~~v~~~~~~pI~vg---------GGI~~~---e~~~~~~~~GAdgvvVG 230 (262)
T 1rd5_A 189 VESLIQEVKKVTNKPVAVG---------FGISKP---EHVKQIAQWGADGVIIG 230 (262)
T ss_dssp HHHHHHHHHHHCSSCEEEE---------SCCCSH---HHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHhhcCCeEEEE---------CCcCCH---HHHHHHHHcCCCEEEEC
Confidence 2222222233347888874 333333 34556667899999875
No 399
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=28.18 E-value=3.5e+02 Score=32.29 Aligned_cols=142 Identities=18% Similarity=0.127 Sum_probs=82.7
Q ss_pred hhcCCcEEEecc---ccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccH-HHHHhh-cCEEEEeCCCccc--------
Q 012943 277 VDNQVDFYAVSF---VKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNL-HSIISA-SDGAMVARGDLGA-------- 343 (453)
Q Consensus 277 ~~~gvd~I~lSf---V~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~Nl-deI~~~-sDgImIgRGDLg~-------- 343 (453)
+..|++.+..+- ..+.+++.++-+.|.+.+...+|++|+=.-.++... ..+.++ +|+|.|.-.+=+.
T Consensus 959 ~~~Gv~lisP~~~~d~~s~edl~~~I~~Lk~~~~~~PV~VKlv~~~gi~~~A~~a~~AGAD~IvVsG~eGGTgasp~~~~ 1038 (1479)
T 1ea0_A 959 STPGVMLISPPPHHDIYSIEDLAQLIYDLKQINPDAKVTVKLVSRSGIGTIAAGVAKANADIILISGNSGGTGASPQTSI 1038 (1479)
T ss_dssp CCTTCCEECCSSCTTCSSHHHHHHHHHHHHHHCTTCEEEEEEECCTTHHHHHHHHHHTTCSEEEEECTTCCCSSEETTHH
T ss_pred CCCCCCccCCCCCcCcCCHHHHHHHHHHHHHhCCCCCEEEEEcCCCChHHHHHHHHHcCCcEEEEcCCCCCCCCCchhhh
Confidence 456777664421 234566666666677766678888887432222222 223333 8999995333121
Q ss_pred -cCCCCCHHHHHHHHHHHHHHcC----CCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcc--c------
Q 012943 344 -ELPIEDVPLLQEDIIRRCRSMQ----KPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGET--A------ 410 (453)
Q Consensus 344 -elg~e~v~~aqk~Ii~~c~~aG----kpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ET--A------ 410 (453)
..|++ ...+..++..+..+.| .|++.+ .+.-+ -.|++.++..|||+|.+..-- +
T Consensus 1039 ~~~G~P-t~~aL~ev~~al~~~glr~~VpVIAd---------GGIrt---G~DVakALaLGAdaV~iGTafL~a~gc~~~ 1105 (1479)
T 1ea0_A 1039 KFAGLP-WEMGLSEVHQVLTLNRLRHRVRLRTD---------GGLKT---GRDIVIAAMLGAEEFGIGTASLIAMGCIMV 1105 (1479)
T ss_dssp HHSCCC-HHHHHHHHHHHHHTTTCTTTSEEEEE---------SSCCS---HHHHHHHHHTTCSEEECCHHHHHHHTCCCC
T ss_pred cCCchh-HHHHHHHHHHHHHHcCCCCCceEEEE---------CCCCC---HHHHHHHHHcCCCeeeEcHHHHHHHHHHHH
Confidence 12222 2234455555555543 667765 33333 678999999999999874221 0
Q ss_pred ----------------------CCCCHHHHHHHHHHHHHHHhc
Q 012943 411 ----------------------HGKFPLKAVKVMHTVALRTES 431 (453)
Q Consensus 411 ----------------------~G~yP~eaV~~m~~I~~~aE~ 431 (453)
...-|...+.++..+..+...
T Consensus 1106 r~Ch~~~CP~Gvatqdp~l~~~~~gg~e~V~n~l~~l~~ELr~ 1148 (1479)
T 1ea0_A 1106 RQCHSNTCPVGVCVQDDKLRQKFVGTPEKVVNLFTFLAEEVRE 1148 (1479)
T ss_dssp CCTTTTCCTTSSSCCCTTGGGSCCCCHHHHHHHHHHHHHHHHH
T ss_pred hhccCCCCCceeEEeCHHHHhhcCCchHHHHHHHHHHHHHHHH
Confidence 112367778888888887774
No 400
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=28.05 E-value=1.2e+02 Score=28.32 Aligned_cols=64 Identities=16% Similarity=0.209 Sum_probs=37.7
Q ss_pred HHhcCCCceEEEEecChhhhccHHHHHhhcCEEEEeCC-Ccccc----CCC-------CCHHHHHHHHHHHHHHcCCCEE
Q 012943 302 LKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARG-DLGAE----LPI-------EDVPLLQEDIIRRCRSMQKPVI 369 (453)
Q Consensus 302 L~~~~~~i~IIakIET~~gv~NldeI~~~sDgImIgRG-DLg~e----lg~-------e~v~~aqk~Ii~~c~~aGkpvi 369 (453)
+.++|..+.++.-.++ .+ +++++...||+++.-| |+.-+ -+. +........+++.+.+.++|++
T Consensus 37 l~~aG~~pv~lp~~~~---~~-~~~~l~~~DGlil~GG~~v~P~~yg~~~~~~~~~~~~~rd~~~~~lir~a~~~~~PiL 112 (254)
T 3fij_A 37 IQKVGGFPIALPIDDP---ST-AVQAISLVDGLLLTGGQDITPQLYLEEPSQEIGAYFPPRDSYEIALVRAALDAGKPIF 112 (254)
T ss_dssp HHHHTCEEEEECCCCG---GG-HHHHHHTCSEEEECCCSCCCGGGGTCCCCTTCCCCCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred HHHCCCEEEEEeCCCc---hH-HHHHHhhCCEEEECCCCCCChhhcCCccCcccCCcChhhhHHHHHHHHHHHHcCCCEE
Confidence 3344554444433222 23 6778888999999887 21111 111 1122446788889999999975
No 401
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=27.94 E-value=1.2e+02 Score=29.63 Aligned_cols=46 Identities=17% Similarity=0.276 Sum_probs=34.1
Q ss_pred HHHHHHHhCCcEEEeecCCCChHHHHHHHHHHHHHHhhcCCCcEEEEeec
Q 012943 116 MIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDT 165 (453)
Q Consensus 116 ~i~~Li~aGmnvaRiNfSHg~~e~~~~~I~~iR~a~~~~~~~~iaIllDL 165 (453)
..+++.+.|-+.+.+++.|++.+.-.+.++.+|++ .+ ..+.|++|.
T Consensus 147 ~a~~~~~~Gf~~iKik~g~~~~~~d~~~v~avr~a---~g-~~~~l~vDa 192 (366)
T 1tkk_A 147 DAENYLKQGFQTLKIKVGKDDIATDIARIQEIRKR---VG-SAVKLRLDA 192 (366)
T ss_dssp HHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHHH---HC-SSSEEEEEC
T ss_pred HHHHHHHcCCCeEEEEeCCCCHHHHHHHHHHHHHH---hC-CCCeEEEEC
Confidence 35667889999999999998877777777777765 34 345566774
No 402
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=27.82 E-value=2.8e+02 Score=24.94 Aligned_cols=98 Identities=14% Similarity=0.199 Sum_probs=51.5
Q ss_pred HHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEe---c----ChhhhccHHHHHhh--cCEEEEeCCCc
Q 012943 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKI---E----SADSIPNLHSIISA--SDGAMVARGDL 341 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakI---E----T~~gv~NldeI~~~--sDgImIgRGDL 341 (453)
+.++.+.+.|++.+... ..+.++...+.++..+.. ++....-+ . +.+.++.+++.+.. .-.+-| |..
T Consensus 23 ~~l~~~~~~Gv~~~v~~-~~~~~~~~~~~~l~~~~~-~~~~~~G~hP~~~~~~~~~~~~~l~~~~~~~~~~~~~i--GEi 98 (259)
T 1zzm_A 23 ASLQRAAQAGVGKIIVP-ATEAENFARVLALAENYQ-PLYAALGLHPGMLEKHSDVSLEQLQQALERRPAKVVAV--GEI 98 (259)
T ss_dssp HHHHHHHHTTEEEEEEE-CCSGGGHHHHHHHHHHCT-TEEEEECCCGGGGGGCCHHHHHHHHHHHHHCCSSEEEE--EEE
T ss_pred HHHHHHHHcCCCEEEEe-cCCHHHHHHHHHHHHhCC-CeEEEEEecccccccCCHHHHHHHHHHHhcCCCCEEEE--EEe
Confidence 45566778899876554 234667777766655533 32222222 0 12334444444433 122333 444
Q ss_pred cccCCCC-CHHHHH----HHHHHHHHHcCCCEEEEe
Q 012943 342 GAELPIE-DVPLLQ----EDIIRRCRSMQKPVIVAT 372 (453)
Q Consensus 342 g~elg~e-~v~~aq----k~Ii~~c~~aGkpvi~aT 372 (453)
|.+.... .-...| ...++.|.+.|+|+++-|
T Consensus 99 Gld~~~~~~~~~~q~~~f~~~~~~a~~~~~Pv~iH~ 134 (259)
T 1zzm_A 99 GLDLFGDDPQFERQQWLLDEQLKLAKRYDLPVILHS 134 (259)
T ss_dssp EEECCSSCCCHHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred ccCCCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEe
Confidence 4443221 112334 556677999999999976
No 403
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=27.64 E-value=1.9e+02 Score=28.48 Aligned_cols=65 Identities=11% Similarity=0.095 Sum_probs=47.6
Q ss_pred HHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhhcCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 012943 295 VHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (453)
Q Consensus 295 v~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~a 371 (453)
...+++.|.+.|..+.+-+.-+.... +.+++++-.|.|+.+-.+ ...+..+-..|+++++|.+.+
T Consensus 92 a~~~~~~l~~lnp~v~v~~~~~~~~~--~~~~~~~~~dvVv~~~d~----------~~~r~~ln~~~~~~~ip~i~~ 156 (346)
T 1y8q_A 92 AEASLERAQNLNPMVDVKVDTEDIEK--KPESFFTQFDAVCLTCCS----------RDVIVKVDQICHKNSIKFFTG 156 (346)
T ss_dssp HHHHHHHHHHTCTTSEEEEECSCGGG--CCHHHHTTCSEEEEESCC----------HHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHhHCCCeEEEEEecccCc--chHHHhcCCCEEEEcCCC----------HHHHHHHHHHHHHcCCCEEEE
Confidence 34567778888888887776555443 557788788988876322 456778999999999998865
No 404
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=27.62 E-value=2e+02 Score=28.28 Aligned_cols=71 Identities=11% Similarity=0.039 Sum_probs=39.6
Q ss_pred CHhhHHHH-HhhhhcCCcEEEeccc---c-------CHHH---HHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh-
Q 012943 266 TDKDWEDI-KFGVDNQVDFYAVSFV---K-------DAKV---VHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA- 330 (453)
Q Consensus 266 tekD~~DI-~~a~~~gvd~I~lSfV---~-------sa~d---v~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~- 330 (453)
+..|...+ +...+.|+|+|-++-- . ...+ +..+++.+ +++||+ .......++++++++.
T Consensus 237 ~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~-----~iPVi~-~Ggi~t~e~a~~~l~~G 310 (349)
T 3hgj_A 237 SLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRV-----GLRTGA-VGLITTPEQAETLLQAG 310 (349)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHH-----CCEEEE-CSSCCCHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHc-----CceEEE-ECCCCCHHHHHHHHHCC
Confidence 44444333 4445789999998731 0 1112 33344333 466665 2322233456667765
Q ss_pred -cCEEEEeCCCcc
Q 012943 331 -SDGAMVARGDLG 342 (453)
Q Consensus 331 -sDgImIgRGDLg 342 (453)
+|.|++||+=|+
T Consensus 311 ~aD~V~iGR~~la 323 (349)
T 3hgj_A 311 SADLVLLGRVLLR 323 (349)
T ss_dssp SCSEEEESTHHHH
T ss_pred CceEEEecHHHHh
Confidence 899999998553
No 405
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=27.59 E-value=1.3e+02 Score=28.75 Aligned_cols=121 Identities=8% Similarity=0.023 Sum_probs=68.2
Q ss_pred hcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh--cCEEEEeCCCccccCCCCCHHHHHH
Q 012943 278 DNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA--SDGAMVARGDLGAELPIEDVPLLQE 355 (453)
Q Consensus 278 ~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~--sDgImIgRGDLg~elg~e~v~~aqk 355 (453)
..++..+++.=....+....+++...+.+-. +....+++++++. .|.++|+ .| .....
T Consensus 22 ~~~~~lvav~d~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ll~~~~vD~V~I~-------tp----~~~H~ 81 (337)
T 3ip3_A 22 DEECSITGIAPGVPEEDLSKLEKAISEMNIK---------PKKYNNWWEMLEKEKPDILVIN-------TV----FSLNG 81 (337)
T ss_dssp CTTEEEEEEECSSTTCCCHHHHHHHHTTTCC---------CEECSSHHHHHHHHCCSEEEEC-------SS----HHHHH
T ss_pred CCCcEEEEEecCCchhhHHHHHHHHHHcCCC---------CcccCCHHHHhcCCCCCEEEEe-------CC----cchHH
Confidence 3466666654321113344445555443321 1245788998875 7999996 22 44567
Q ss_pred HHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHh-CccEEEecCcccCCCCHHHHHHHHHHHHHHH
Q 012943 356 DIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVRE-GADAVMLSGETAHGKFPLKAVKVMHTVALRT 429 (453)
Q Consensus 356 ~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~-G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~a 429 (453)
.++.+|-++||+|++ .+-...+.+|...+..+... |.-.++..+.. .--+ .+++.+++++.+-
T Consensus 82 ~~~~~al~aGkhVl~--------EKPla~~~~ea~~l~~~a~~~g~~~~~~v~~~-~R~~--p~~~~~k~~i~~g 145 (337)
T 3ip3_A 82 KILLEALERKIHAFV--------EKPIATTFEDLEKIRSVYQKVRNEVFFTAMFG-IRYR--PHFLTAKKLVSEG 145 (337)
T ss_dssp HHHHHHHHTTCEEEE--------CSSSCSSHHHHHHHHHHHHHHTTTCCEEECCG-GGGS--HHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCcEEE--------eCCCCCCHHHHHHHHHHHHHhCCceEEEeccc-ccCC--HHHHHHHHHHhcC
Confidence 788888899999887 24445667777776665543 43311111111 1122 3677777777653
No 406
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=27.52 E-value=3.7e+02 Score=26.22 Aligned_cols=82 Identities=15% Similarity=0.244 Sum_probs=44.0
Q ss_pred HhcCCCceEEEEecCh------hhhccHHHHHhh-cCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHc-CCCEEEEech
Q 012943 303 KSCNADIHVIVKIESA------DSIPNLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSM-QKPVIVATNM 374 (453)
Q Consensus 303 ~~~~~~i~IIakIET~------~gv~NldeI~~~-sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~a-Gkpvi~aTqm 374 (453)
.+.+.+..|+|..|.. ++++.+..-.++ +|+||+- ++... ...+++ |++. ++|+.+ +|
T Consensus 157 ~~~~~d~~I~ARTDa~~~~gldeAi~Ra~ay~eAGAD~ifi~--------~~~~~-~~~~~i---~~~~~~~Pv~~--n~ 222 (307)
T 3lye_A 157 RRLRSDFVLIARTDALQSLGYEECIERLRAARDEGADVGLLE--------GFRSK-EQAAAA---VAALAPWPLLL--NS 222 (307)
T ss_dssp HHTTCCCEEEEEECCHHHHCHHHHHHHHHHHHHTTCSEEEEC--------CCSCH-HHHHHH---HHHHTTSCBEE--EE
T ss_pred HhcCCCeEEEEechhhhccCHHHHHHHHHHHHHCCCCEEEec--------CCCCH-HHHHHH---HHHccCCceeE--Ee
Confidence 3346678899999986 344444444444 7999983 23222 222333 4443 588754 23
Q ss_pred hhhhccCCCCchHHHHHHHHHHHhCccEEEe
Q 012943 375 LESMIDHPTPTRAEVSDIAIAVREGADAVML 405 (453)
Q Consensus 375 LeSM~~~~~PtrAEv~Dv~nav~~G~D~vmL 405 (453)
++. -..|..+.+|.. ..|+..++.
T Consensus 223 ~~~-g~~p~~t~~eL~------~lGv~~v~~ 246 (307)
T 3lye_A 223 VEN-GHSPLITVEEAK------AMGFRIMIF 246 (307)
T ss_dssp ETT-SSSCCCCHHHHH------HHTCSEEEE
T ss_pred ecC-CCCCCCCHHHHH------HcCCeEEEE
Confidence 321 123444555543 448877755
No 407
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=27.43 E-value=1.6e+02 Score=26.94 Aligned_cols=119 Identities=12% Similarity=-0.085 Sum_probs=65.4
Q ss_pred HHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEe------cChhhhccHHHHHhh-----cCEEEEeC-
Q 012943 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKI------ESADSIPNLHSIISA-----SDGAMVAR- 338 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakI------ET~~gv~NldeI~~~-----sDgImIgR- 338 (453)
+.++.+.+.|.|+|-+...- + ++.++++.+.+.|-.+..+.-- ...++++.+...+.. ++.+.+..
T Consensus 35 ~~l~~~~~~G~~~vEl~~~~-~-~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~~~ 112 (301)
T 3cny_A 35 QLLSDIVVAGFQGTEVGGFF-P-GPEKLNYELKLRNLEIAGQWFSSYIIRDGIEKASEAFEKHCQYLKAINAPVAVVSEQ 112 (301)
T ss_dssp HHHHHHHHHTCCEECCCTTC-C-CHHHHHHHHHHTTCEECEEEEEECHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred HHHHHHHHhCCCEEEecCCC-C-CHHHHHHHHHHCCCeEEEEeccCCCChhhHHHHHHHHHHHHHHHHHcCCCEEEecCC
Confidence 45577778899998776322 2 7788899998876543333110 011234444444443 46666654
Q ss_pred -----CCccccCC------C----CCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHH
Q 012943 339 -----GDLGAELP------I----EDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAV 396 (453)
Q Consensus 339 -----GDLg~elg------~----e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav 396 (453)
|.....++ . +.+....+++...|.++|..+.+ |.+......+..++.++...+
T Consensus 113 ~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~l-----E~~~~~~~~~~~~~~~l~~~~ 180 (301)
T 3cny_A 113 TYTIQRSDTANIFKDKPYFTDKEWDEVCKGLNHYGEIAAKYGLKVAY-----HHHMGTGIQTKEETDRLMANT 180 (301)
T ss_dssp TTCCTTCSSCCTTTCCCCCCHHHHHHHHHHHHHHHHHHHHTTCEEEE-----ECCTTSSSCSHHHHHHHHHTS
T ss_pred CccccCcccCCcccccccCcHHHHHHHHHHHHHHHHHHHHcCCEEEE-----ecCCCcccCCHHHHHHHHHhC
Confidence 32211111 1 23445557888888889987665 333333344555555554443
No 408
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A
Probab=27.30 E-value=82 Score=29.96 Aligned_cols=53 Identities=19% Similarity=0.199 Sum_probs=34.4
Q ss_pred CCCHHHHHHHH-HhCCcEEEeecCCC------ChHHHHHHHHHHHHHHhhcCCCcEEEEeecCC
Q 012943 111 TSSREMIWKLA-EEGMNVARLNMSHG------DHASHQKTIDLVKEYNSQFEDKAVAIMLDTKG 167 (453)
Q Consensus 111 s~s~e~i~~Li-~aGmnvaRiNfSHg------~~e~~~~~I~~iR~a~~~~~~~~iaIllDLkG 167 (453)
..+.+.++.|. +.|+|++|+-+.+. +++ +.+.++.+=+...+.+ +.+++|+-+
T Consensus 43 ~~~~~~~~~l~~~~G~N~VRip~~~~~~~~~~~~~-~~~~ld~~v~~a~~~G---i~Vild~H~ 102 (303)
T 7a3h_A 43 FVNYESMKWLRDDWGINVFRAAMYTSSGGYIDDPS-VKEKVKEAVEAAIDLD---IYVIIDWHI 102 (303)
T ss_dssp GCSHHHHHHHHHHTCCCEEEEEEESSTTSTTTCTT-HHHHHHHHHHHHHHHT---CEEEEEEEC
T ss_pred cCCHHHHHHHHHhcCCCEEEEEEEeCCCCccCCHH-HHHHHHHHHHHHHHCC---CEEEEEecc
Confidence 34678899998 57999999987542 222 3344444444445555 667888765
No 409
>1ydy_A Glycerophosphoryl diester phosphodiesterase; structural genomics, PSI, protein structu initiative; 1.70A {Escherichia coli} SCOP: c.1.18.3 PDB: 1t8q_A
Probab=27.18 E-value=1.5e+02 Score=28.92 Aligned_cols=125 Identities=18% Similarity=0.236 Sum_probs=68.0
Q ss_pred cEEEeccccCHHHHHHHHHHH-HhcCCCceEEEEecChh----------------------hhccHHHHHhhcCEEEEeC
Q 012943 282 DFYAVSFVKDAKVVHELKDYL-KSCNADIHVIVKIESAD----------------------SIPNLHSIISASDGAMVAR 338 (453)
Q Consensus 282 d~I~lSfV~sa~dv~~v~~~L-~~~~~~i~IIakIET~~----------------------gv~NldeI~~~sDgImIgR 338 (453)
..+.-|| +.+.+..+++.+ .+.+.++++...++... ...++.++...++++-..-
T Consensus 204 ~v~i~SF--~~~~l~~~~~~~~p~~~p~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~i~p~~ 281 (356)
T 1ydy_A 204 KVYLQCF--DADELKRIKNELEPKMGMELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADGIGPDY 281 (356)
T ss_dssp SBEEEES--CHHHHHHHHHTHHHHHTCCCEEEEEECCGGGCCCEEECTTSCEEECCCGGGGSTTHHHHHTTTCSEEEEBG
T ss_pred CEEEEcC--CHHHHHHHHhhcccccCCCceEEEEeccCcccccccccccccccccchhhhcchhhHHHHHhhCeEEccCH
Confidence 5677788 566677777652 33345666665554321 1245666666677765432
Q ss_pred CCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCC-CCch-HHHHHHHH--HHHhCccEEEecCcccCCCC
Q 012943 339 GDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHP-TPTR-AEVSDIAI--AVREGADAVMLSGETAHGKF 414 (453)
Q Consensus 339 GDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~-~Ptr-AEv~Dv~n--av~~G~D~vmLs~ETA~G~y 414 (453)
.-+........ .......++.|+++|++|.+-|= ++. .|.. .+..+.++ +...|+|+|+- .|
T Consensus 282 ~~~~~~~~~~~-~~~~~~~v~~ah~~Gl~V~~WTv------n~~~l~~~~~d~~~~~~~~l~~~GVDgIiT-------D~ 347 (356)
T 1ydy_A 282 HMLIEETSQPG-NIKLTGMVQDAQQNKLVVHPYTV------RSDKLPEYTPDVNQLYDALYNKAGVNGLFT-------DF 347 (356)
T ss_dssp GGTBCTTCBTT-BCCBCSHHHHHHHTTCEECCBCB------CTTSCCTTCSSHHHHHHHHHTTSCCSEEEE-------SC
T ss_pred HHhcccccccc-ccCCHHHHHHHHHCCCEEEEEEE------CcccccccccCHHHHHHHHHHHcCCCEEEe-------CC
Confidence 21110000000 00125678999999999988761 111 1110 12344533 34789999986 48
Q ss_pred HHHHHHHH
Q 012943 415 PLKAVKVM 422 (453)
Q Consensus 415 P~eaV~~m 422 (453)
|-.+++++
T Consensus 348 P~~~~~~l 355 (356)
T 1ydy_A 348 PDKAVKFL 355 (356)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhh
Confidence 88777665
No 410
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=27.11 E-value=1.7e+02 Score=28.35 Aligned_cols=46 Identities=17% Similarity=0.104 Sum_probs=27.5
Q ss_pred chHH-HHHHHHHHHhCccEEEecCcccCCCCHHHHHHHHHHHHHHHh
Q 012943 385 TRAE-VSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTE 430 (453)
Q Consensus 385 trAE-v~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE 430 (453)
+-.| +.-.-.+-..|+|++|+..=--...-+-+.++..+.|+..+.
T Consensus 91 st~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~ 137 (314)
T 3d0c_A 91 SVDTAIELGKSAIDSGADCVMIHQPVHPYITDAGAVEYYRNIIEALD 137 (314)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCCCCSCCCHHHHHHHHHHHHHHSS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 3344 444555666788888885322222335667778888876654
No 411
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=27.10 E-value=3.3e+02 Score=24.11 Aligned_cols=138 Identities=12% Similarity=0.131 Sum_probs=76.2
Q ss_pred CCCCHhhHHHH-HhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecCh---------hhhccHHHHHhh-c
Q 012943 263 PSITDKDWEDI-KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESA---------DSIPNLHSIISA-S 331 (453)
Q Consensus 263 p~ltekD~~DI-~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~---------~gv~NldeI~~~-s 331 (453)
|.-...+...+ +.+.+.|++++-+ .+++.++.+++.. +.+++..+-+. .-.+.+++.+.. +
T Consensus 18 p~~~~~~~~~~a~~~~~~Ga~~i~~---~~~~~i~~i~~~~-----~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~Ga 89 (223)
T 1y0e_A 18 PLHSSFIMSKMALAAYEGGAVGIRA---NTKEDILAIKETV-----DLPVIGIVKRDYDHSDVFITATSKEVDELIESQC 89 (223)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEE---ESHHHHHHHHHHC-----CSCEEEECBCCCTTCCCCBSCSHHHHHHHHHHTC
T ss_pred CCCCCccHHHHHHHHHHCCCeeecc---CCHHHHHHHHHhc-----CCCEEeeeccCCCccccccCCcHHHHHHHHhCCC
Confidence 33344555555 3445789998854 5788887777654 34444322110 012344555544 7
Q ss_pred CEEEEeCCCccccCCCCCHHHHHHHHHHHHHHc--CCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecC--
Q 012943 332 DGAMVARGDLGAELPIEDVPLLQEDIIRRCRSM--QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG-- 407 (453)
Q Consensus 332 DgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~a--Gkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~-- 407 (453)
|.+.++-.++.- +.+.+ .++++.+++. |+++++-. .|.. ++..+...|+|.++++.
T Consensus 90 d~v~l~~~~~~~--p~~~~----~~~i~~~~~~~~~~~v~~~~-----------~t~~---e~~~~~~~G~d~i~~~~~g 149 (223)
T 1y0e_A 90 EVIALDATLQQR--PKETL----DELVSYIRTHAPNVEIMADI-----------ATVE---EAKNAARLGFDYIGTTLHG 149 (223)
T ss_dssp SEEEEECSCSCC--SSSCH----HHHHHHHHHHCTTSEEEEEC-----------SSHH---HHHHHHHTTCSEEECTTTT
T ss_pred CEEEEeeecccC--cccCH----HHHHHHHHHhCCCceEEecC-----------CCHH---HHHHHHHcCCCEEEeCCCc
Confidence 999887554310 10222 4677777777 88876521 2333 34467889999998753
Q ss_pred cccC--CCC-HHHHHHHHHHHHHH
Q 012943 408 ETAH--GKF-PLKAVKVMHTVALR 428 (453)
Q Consensus 408 ETA~--G~y-P~eaV~~m~~I~~~ 428 (453)
-|.. +.. ....++.+.++...
T Consensus 150 ~t~~~~~~~~~~~~~~~~~~~~~~ 173 (223)
T 1y0e_A 150 YTSYTQGQLLYQNDFQFLKDVLQS 173 (223)
T ss_dssp SSTTSTTCCTTHHHHHHHHHHHHH
T ss_pred CcCCCCCCCCCcccHHHHHHHHhh
Confidence 2222 211 23356666666554
No 412
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=27.07 E-value=1.9e+02 Score=26.34 Aligned_cols=143 Identities=11% Similarity=-0.010 Sum_probs=78.6
Q ss_pred HHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEE-ec---------------ChhhhccHHHHHhh----
Q 012943 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVK-IE---------------SADSIPNLHSIISA---- 330 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIak-IE---------------T~~gv~NldeI~~~---- 330 (453)
+.++.+.+.|.|+|-+.+. ...++.++++.+++.|-.+..+.- .- ..++++.+.+.+..
T Consensus 27 ~~l~~~~~~G~~~vEl~~~-~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~A~~l 105 (269)
T 3ngf_A 27 ERFRLAAEAGFGGVEFLFP-YDFDADVIARELKQHNLTQVLFNMPPGDWAAGERGMAAISGREQEFRDNVDIALHYALAL 105 (269)
T ss_dssp HHHHHHHHTTCSEEECSCC-TTSCHHHHHHHHHHTTCEEEEEECCCSCTTTTCCBCTTCTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCEEEecCC-ccCCHHHHHHHHHHcCCcEEEEecCCCccccCCCCcCCCccHHHHHHHHHHHHHHHHHHc
Confidence 4567778899999988653 345678889999887654332221 00 01234445554443
Q ss_pred -cCEEEEeCCCccccCC----CCCHHHHHHHHHHHHHHcCCCEEEEechhhhhc-----cCCCCchHHHHHHHHHHHhCc
Q 012943 331 -SDGAMVARGDLGAELP----IEDVPLLQEDIIRRCRSMQKPVIVATNMLESMI-----DHPTPTRAEVSDIAIAVREGA 400 (453)
Q Consensus 331 -sDgImIgRGDLg~elg----~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~-----~~~~PtrAEv~Dv~nav~~G~ 400 (453)
++.+.+.+| ...... ++.+....+++...|.+.|..+.+ |.|- .+...+..++.++...+ |.
T Consensus 106 Ga~~v~~~~g-~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~l-----E~~n~~~~~~~~~~~~~~~~~l~~~v--~~ 177 (269)
T 3ngf_A 106 DCRTLHAMSG-ITEGLDRKACEETFIENFRYAADKLAPHGITVLV-----EPLNTRNMPGYFIVHQLEAVGLVKRV--NR 177 (269)
T ss_dssp TCCEEECCBC-BCTTSCHHHHHHHHHHHHHHHHHHHGGGTCEEEE-----CCCCTTTSTTBSCCCHHHHHHHHHHH--CC
T ss_pred CCCEEEEccC-CCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEE-----eeCCcccCccchhcCHHHHHHHHHHh--CC
Confidence 467777666 322221 123445557777888888877665 3221 12334555666665555 23
Q ss_pred cEEEecCccc----CCCCHHHHHHHH
Q 012943 401 DAVMLSGETA----HGKFPLKAVKVM 422 (453)
Q Consensus 401 D~vmLs~ETA----~G~yP~eaV~~m 422 (453)
+.+-+.-+|. .|..|.+.++.+
T Consensus 178 ~~vg~~~D~~h~~~~g~d~~~~l~~~ 203 (269)
T 3ngf_A 178 PNVAVQLDLYHAQIMDGDLTRLIEKM 203 (269)
T ss_dssp TTEEEEEEHHHHHHHTCCHHHHHHHT
T ss_pred CCCCeEEEhhhHHhhCCCHHHHHHHh
Confidence 3333333332 355666665543
No 413
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=27.03 E-value=89 Score=30.41 Aligned_cols=72 Identities=24% Similarity=0.240 Sum_probs=37.3
Q ss_pred cCEEEEeCCC-cc-ccCCCCC-----HHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHH-hCccE
Q 012943 331 SDGAMVARGD-LG-AELPIED-----VPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVR-EGADA 402 (453)
Q Consensus 331 sDgImIgRGD-Lg-~elg~e~-----v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~-~G~D~ 402 (453)
.|.|++ || |+ +.+|++. +..+....-..++....|.+++ - +..|-....|.++ +.-..+.+. .|+++
T Consensus 55 ~d~ilv--GdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vva-D-~pfgsy~~s~~~a-~~na~rl~~eaGa~a 129 (281)
T 1oy0_A 55 IPVLLV--GDSAANVVYGYDTTVPISIDELIPLVRGVVRGAPHALVVA-D-LPFGSYEAGPTAA-LAAATRFLKDGGAHA 129 (281)
T ss_dssp CCEEEE--CTTHHHHTTCCSSSSSCCGGGTHHHHHHHHHHCTTSEEEE-E-CCTTSSTTCHHHH-HHHHHHHHHTTCCSE
T ss_pred CCEEEE--CHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhcCCCCeEEE-E-CCCCcccCCHHHH-HHHHHHHHHHhCCeE
Confidence 688887 55 54 3457642 3333333444466677776664 0 1111111123222 222455565 89999
Q ss_pred EEecC
Q 012943 403 VMLSG 407 (453)
Q Consensus 403 vmLs~ 407 (453)
|-|=+
T Consensus 130 VklEd 134 (281)
T 1oy0_A 130 VKLEG 134 (281)
T ss_dssp EEEEB
T ss_pred EEECC
Confidence 99954
No 414
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=27.02 E-value=1.2e+02 Score=30.04 Aligned_cols=45 Identities=18% Similarity=0.279 Sum_probs=34.4
Q ss_pred HHHHHHhCCcEEEeecCCCChHHHHHHHHHHHHHHhhcCCCcEEEEeec
Q 012943 117 IWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDT 165 (453)
Q Consensus 117 i~~Li~aGmnvaRiNfSHg~~e~~~~~I~~iR~a~~~~~~~~iaIllDL 165 (453)
.+++.++|-+.+.|+..|++.+.-.+.++.+|++. + ..+.|++|.
T Consensus 173 a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~a~---g-~~~~l~vDa 217 (392)
T 1tzz_A 173 MRGYLDRGYNVVKMKIGGAPIEEDRMRIEAVLEEI---G-KDAQLAVDA 217 (392)
T ss_dssp HHHHHTTTCSEEEEECSSSCHHHHHHHHHHHHHHH---T-TTCEEEEEC
T ss_pred HHHHHHcCCCEEEEcCCCCCHHHHHHHHHHHHHhc---C-CCCeEEEEC
Confidence 46678899999999999988877777777777653 4 445677775
No 415
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=26.97 E-value=2.8e+02 Score=27.27 Aligned_cols=62 Identities=10% Similarity=0.071 Sum_probs=46.1
Q ss_pred HHHHHHHHHHcCCCEEEEechhhhhccCCCC--chHH-HHHHHHHHH-hCccEEEecCcccC--CCCHHHHHHHHHHHHH
Q 012943 354 QEDIIRRCRSMQKPVIVATNMLESMIDHPTP--TRAE-VSDIAIAVR-EGADAVMLSGETAH--GKFPLKAVKVMHTVAL 427 (453)
Q Consensus 354 qk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~P--trAE-v~Dv~nav~-~G~D~vmLs~ETA~--G~yP~eaV~~m~~I~~ 427 (453)
.++++++| ..||+++ .+.. +..| ...++.++. .|+-++..-.=.-. -..|...|+.+..|+.
T Consensus 229 f~~Vv~a~---~vPVVia---------GG~k~~~~~e~L~~v~~A~~~aGa~Gv~vGRNIfQ~~~~dp~~~v~al~~iVH 296 (307)
T 3fok_A 229 MERVMEST---TMPTLLL---------GGEGGNDPDATFASWEHALTLPGVRGLTVGRTLLYPQDGDVAAAVDTAARLVH 296 (307)
T ss_dssp HHHHGGGC---SSCEEEE---------CCSCC--CHHHHHHHHHHTTSTTEEEEEECTTTSSCSSSCHHHHHHHHHHHHC
T ss_pred HHHHHHhC---CCCEEEe---------CCCCCCCHHHHHHHHHHHHHhCCCeEEeechhhccCCCCCHHHHHHHHHHHHH
Confidence 36666555 6999997 2233 2233 778899999 79999988666556 6899999999999987
No 416
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=26.93 E-value=70 Score=29.32 Aligned_cols=49 Identities=14% Similarity=0.240 Sum_probs=31.3
Q ss_pred HHHHHHHHHhCCcEEEeecC-CCC----------------hHHHHHHHHHHHHHHhhcCCCcEEEEeec
Q 012943 114 REMIWKLAEEGMNVARLNMS-HGD----------------HASHQKTIDLVKEYNSQFEDKAVAIMLDT 165 (453)
Q Consensus 114 ~e~i~~Li~aGmnvaRiNfS-Hg~----------------~e~~~~~I~~iR~a~~~~~~~~iaIllDL 165 (453)
.+.|+.|-+.|+|+.|+=++ ++. .+.|.+.++.+=++.++.| +.+++|+
T Consensus 45 ~~~l~~~k~~G~N~vRv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~G---i~vil~~ 110 (351)
T 3vup_A 45 EPEFKKLHDAGGNSMRLWIHIQGETTPAFNDQGFVTGPDKQGTMLDDMKDLLDTAKKYN---ILVFPCL 110 (351)
T ss_dssp HHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEESCSSSCHHHHHHHHHHHHHHTT---CEEEEEE
T ss_pred HHHHHHHHHcCCcEEEECcccccccCcccccccccccccccHHHHHHHHHHHHHHHHCC---CeEEEEe
Confidence 34578899999999998432 111 1245555555556666666 6677776
No 417
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=26.89 E-value=91 Score=29.37 Aligned_cols=46 Identities=20% Similarity=0.285 Sum_probs=29.5
Q ss_pred HHHHHHHHhCCcEEEeecCCCC------hHHHHHHHHHHHHHHhhcCCCcEEEEeecCC
Q 012943 115 EMIWKLAEEGMNVARLNMSHGD------HASHQKTIDLVKEYNSQFEDKAVAIMLDTKG 167 (453)
Q Consensus 115 e~i~~Li~aGmnvaRiNfSHg~------~e~~~~~I~~iR~a~~~~~~~~iaIllDLkG 167 (453)
+.++.|-+.|+|++|+-++.+. .+...+++ +...+.+ +.+++|+-+
T Consensus 36 ~~~~~lk~~G~N~VRi~~~~~~~w~~~~~~~ld~~v----~~a~~~G---i~Vild~h~ 87 (302)
T 1bqc_A 36 QAFADIKSHGANTVRVVLSNGVRWSKNGPSDVANVI----SLCKQNR---LICMLEVHD 87 (302)
T ss_dssp THHHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHH----HHHHHTT---CEEEEEEGG
T ss_pred HHHHHHHHcCCCEEEEEccCCcccCCCCHHHHHHHH----HHHHHCC---CEEEEEecc
Confidence 6788889999999999886431 22233333 2333434 678888754
No 418
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=26.84 E-value=1e+02 Score=29.53 Aligned_cols=51 Identities=16% Similarity=0.313 Sum_probs=39.0
Q ss_pred HHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccCCCCHHHHHHHHHH
Q 012943 354 QEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHT 424 (453)
Q Consensus 354 qk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~ 424 (453)
-...++.|+++|++|.+-|- . +..+...++..|+|+|+- .||-.+.+++.+
T Consensus 257 ~~~~v~~~~~~Gl~V~~WTV--------n-----~~~~~~~l~~~GVDgIiT-------D~P~~~~~~l~~ 307 (313)
T 3l12_A 257 TPELVAEAHDLGLIVLTWTV--------N-----EPEDIRRMATTGVDGIVT-------DYPGRTQRILID 307 (313)
T ss_dssp CHHHHHHHHHTTCEEEEBCC--------C-----SHHHHHHHHHHTCSEEEE-------SCHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCEEEEEcC--------C-----CHHHHHHHHHcCCCEEEe-------CCHHHHHHHHHh
Confidence 36789999999999998651 1 123566788899999986 689888777653
No 419
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=26.66 E-value=59 Score=32.03 Aligned_cols=68 Identities=15% Similarity=0.267 Sum_probs=49.6
Q ss_pred HHHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhh--ccHHHHHhh-cCEEEEeC-------C
Q 012943 270 WEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSI--PNLHSIISA-SDGAMVAR-------G 339 (453)
Q Consensus 270 ~~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv--~NldeI~~~-sDgImIgR-------G 339 (453)
.+.+..+++.|+|.|.+-.. ++++++++.+.+. .+ ++||---|+ +|+.++++. +|.|-+|. -
T Consensus 217 l~e~~eAl~aGaDiImLDn~-s~~~l~~av~~~~---~~----v~leaSGGIt~~~i~~~A~tGVD~IsvGalthsa~~l 288 (300)
T 3l0g_A 217 ISQVEESLSNNVDMILLDNM-SISEIKKAVDIVN---GK----SVLEVSGCVNIRNVRNIALTGVDYISIGCITNSFQNK 288 (300)
T ss_dssp HHHHHHHHHTTCSEEEEESC-CHHHHHHHHHHHT---TS----SEEEEESSCCTTTHHHHHTTTCSEEECGGGTSSCCCC
T ss_pred HHHHHHHHHcCCCEEEECCC-CHHHHHHHHHhhc---Cc----eEEEEECCCCHHHHHHHHHcCCCEEEeCccccCCCcc
Confidence 46667778899999999764 6788887777663 34 355654444 789999987 89999884 4
Q ss_pred CccccC
Q 012943 340 DLGAEL 345 (453)
Q Consensus 340 DLg~el 345 (453)
||++.+
T Consensus 289 Disl~i 294 (300)
T 3l0g_A 289 DIGLDI 294 (300)
T ss_dssp CEEEEE
T ss_pred eeEEEe
Confidence 666655
No 420
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=26.62 E-value=4.9e+02 Score=31.16 Aligned_cols=143 Identities=17% Similarity=0.097 Sum_probs=84.3
Q ss_pred hhhcCCcEEEecc---ccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccH-HHHHhh-cCEEEEeCCCcc--------
Q 012943 276 GVDNQVDFYAVSF---VKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNL-HSIISA-SDGAMVARGDLG-------- 342 (453)
Q Consensus 276 a~~~gvd~I~lSf---V~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~Nl-deI~~~-sDgImIgRGDLg-------- 342 (453)
.++.|++.+..+- ..+.+++.++-+.|.+.+...+|++|+=.-.++... ..+.++ +|+|.|.-.+=|
T Consensus 993 ~~~~Gv~lisP~~~~d~~s~edl~~~I~~Lk~~~~~~PV~VKlv~~~gi~~~A~~a~kAGAD~IvVsG~eGGTgasp~~~ 1072 (1520)
T 1ofd_A 993 RSKPGVTLISPPPHHDIYSIEDLAQLIYDLHQINPEAQVSVKLVAEIGIGTIAAGVAKANADIIQISGHDGGTGASPLSS 1072 (1520)
T ss_dssp TSCTTCCEECCSSCTTCSSHHHHHHHHHHHHHHCTTSEEEEEEECSTTHHHHHHHHHHTTCSEEEEECTTCCCSSEEHHH
T ss_pred CCCCCCCeeCCCCCcCcCCHHHHHHHHHHHHHhCCCCCEEEEecCCCChHHHHHHHHHcCCCEEEEeCCCCccCCCcchh
Confidence 3566777765432 245666666666677766678888886432232222 223333 899999543311
Q ss_pred -ccCCCCCHHHHHHHHHHHHHHcC----CCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcc--cC----
Q 012943 343 -AELPIEDVPLLQEDIIRRCRSMQ----KPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGET--AH---- 411 (453)
Q Consensus 343 -~elg~e~v~~aqk~Ii~~c~~aG----kpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ET--A~---- 411 (453)
...|++ ...+..++..+..+.| .|+|.+. +.-+ -.|++.++..|||+|.+..-- +.
T Consensus 1073 ~~~~GlP-t~~aL~ev~~al~~~glr~~IpVIAdG---------GIrt---G~DVakALaLGAdaV~iGTafL~algc~~ 1139 (1520)
T 1ofd_A 1073 IKHAGSP-WELGVTEVHRVLMENQLRDRVLLRADG---------GLKT---GWDVVMAALMGAEEYGFGSIAMIAEGCIM 1139 (1520)
T ss_dssp HHHBCCC-HHHHHHHHHHHHHHTTCGGGCEEEEES---------SCCS---HHHHHHHHHTTCSEEECSHHHHHHTTCCC
T ss_pred hcCCchh-HHHHHHHHHHHHHhcCCCCCceEEEEC---------CCCC---HHHHHHHHHcCCCeeEEcHHHHHHHHHHH
Confidence 112322 2344455555555543 6777753 3333 578999999999999875221 11
Q ss_pred ------------------------CCCHHHHHHHHHHHHHHHhc
Q 012943 412 ------------------------GKFPLKAVKVMHTVALRTES 431 (453)
Q Consensus 412 ------------------------G~yP~eaV~~m~~I~~~aE~ 431 (453)
..-|...+.++..+..+...
T Consensus 1140 ~r~Ch~~~CP~Gvatqdp~L~~~~~gg~e~V~n~l~~l~~ELr~ 1183 (1520)
T 1ofd_A 1140 ARVCHTNNCPVGVATQQERLRQRFKGVPGQVVNFFYFIAEEVRS 1183 (1520)
T ss_dssp CCCGGGTCCTTSSSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHhccCCCCCceeEeeCHHHHhhcCCcHHHHHHHHHHHHHHHHH
Confidence 12367778888888887774
No 421
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=26.61 E-value=79 Score=29.90 Aligned_cols=47 Identities=15% Similarity=0.220 Sum_probs=34.0
Q ss_pred hccHHHHHhhcCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEe
Q 012943 321 IPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVAT 372 (453)
Q Consensus 321 v~NldeI~~~sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aT 372 (453)
++.+.++++.+|.+.|++|=+ -++.......+++.+++.++|+++=.
T Consensus 47 ~~e~~~~~~~~dalvi~~G~~-----~~~~~~~~~~~~~~a~~~~~pvVlDp 93 (265)
T 1v8a_A 47 EEELEEMIRLADAVVINIGTL-----DSGWRRSMVKATEIANELGKPIVLDP 93 (265)
T ss_dssp TTTHHHHHHHCSEEEEECTTC-----CHHHHHHHHHHHHHHHHHTCCEEEEC
T ss_pred HHHHHHHHHHCCEEEEEECCC-----CHHHHHHHHHHHHHHHHcCCcEEEcC
Confidence 556778888899999986643 22334456677888899999988743
No 422
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=26.45 E-value=1.3e+02 Score=30.11 Aligned_cols=69 Identities=10% Similarity=0.068 Sum_probs=43.0
Q ss_pred HHHHhhhhcCCcEEEec------cccCHHHH-HHHHHHHHhcCCCceEEEEe---cChhhhccHHHHHhh-cCEEEEeCC
Q 012943 271 EDIKFGVDNQVDFYAVS------FVKDAKVV-HELKDYLKSCNADIHVIVKI---ESADSIPNLHSIISA-SDGAMVARG 339 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lS------fV~sa~dv-~~v~~~L~~~~~~i~IIakI---ET~~gv~NldeI~~~-sDgImIgRG 339 (453)
+.+++.++.|+|+|.+. +.-+.++- +-++..++..+.+++||+-+ -|.++++......+. +|++++-+-
T Consensus 84 ~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlvv~P 163 (360)
T 4dpp_A 84 DLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFAVGMHAALHINP 163 (360)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred HHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 44567789999998772 11123333 33444555567788999876 355666655554444 799888643
No 423
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=26.21 E-value=66 Score=31.43 Aligned_cols=60 Identities=8% Similarity=0.151 Sum_probs=43.6
Q ss_pred HHHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhh--hccHHHHHhh-cCEEEEe
Q 012943 270 WEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADS--IPNLHSIISA-SDGAMVA 337 (453)
Q Consensus 270 ~~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~g--v~NldeI~~~-sDgImIg 337 (453)
.+.+..+++.|+|+|.+-.. ++++++++.+.+. .++ +||---| .+|+.++++. +|+|-+|
T Consensus 208 l~ea~eAl~aGaD~I~LDn~-~~~~l~~av~~~~---~~v----~ieaSGGIt~~~i~~~a~tGVD~IsvG 270 (287)
T 3tqv_A 208 LDELNQAIAAKADIVMLDNF-SGEDIDIAVSIAR---GKV----ALEVSGNIDRNSIVAIAKTGVDFISVG 270 (287)
T ss_dssp HHHHHHHHHTTCSEEEEESC-CHHHHHHHHHHHT---TTC----EEEEESSCCTTTHHHHHTTTCSEEECS
T ss_pred HHHHHHHHHcCCCEEEEcCC-CHHHHHHHHHhhc---CCc----eEEEECCCCHHHHHHHHHcCCCEEEEC
Confidence 45667778899999999763 6788877777663 343 4454444 4789999987 8999986
No 424
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=26.18 E-value=89 Score=30.02 Aligned_cols=86 Identities=8% Similarity=0.093 Sum_probs=51.6
Q ss_pred hhccHHHHHhh--cCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHH
Q 012943 320 SIPNLHSIISA--SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVR 397 (453)
Q Consensus 320 gv~NldeI~~~--sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~ 397 (453)
+..+++++++. .|+|+|+ .| +..-..++.+|-++||+|++ .+-...+.+|...+..+..
T Consensus 74 ~y~d~~ell~~~~iDaV~I~-------tP----~~~H~~~~~~al~aGkhVl~--------EKPla~~~~ea~~l~~~a~ 134 (350)
T 4had_A 74 AFGSYEEMLASDVIDAVYIP-------LP----TSQHIEWSIKAADAGKHVVC--------EKPLALKAGDIDAVIAARD 134 (350)
T ss_dssp EESSHHHHHHCSSCSEEEEC-------SC----GGGHHHHHHHHHHTTCEEEE--------CSCCCSSGGGGHHHHHHHH
T ss_pred eeCCHHHHhcCCCCCEEEEe-------CC----CchhHHHHHHHHhcCCEEEE--------eCCcccchhhHHHHHHHHH
Confidence 46788999875 7999996 33 22445667778888999887 2444566777777666554
Q ss_pred hCccEEEecCcccCCCCHHHHHHHHHHHHHH
Q 012943 398 EGADAVMLSGETAHGKFPLKAVKVMHTVALR 428 (453)
Q Consensus 398 ~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~ 428 (453)
. ...++.-+-.-. -+ .+++.+++++.+
T Consensus 135 ~-~~~~l~v~~~~R-~~--p~~~~~k~~i~~ 161 (350)
T 4had_A 135 R-NKVVVTEAYMIT-YS--PVWQKVRSLIDE 161 (350)
T ss_dssp H-HTCCEEECCGGG-GS--HHHHHHHHHHHT
T ss_pred H-cCCceeEeeeee-cC--HHHHHhhHhhhc
Confidence 2 222222111111 12 367777777764
No 425
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=26.13 E-value=2.2e+02 Score=27.80 Aligned_cols=90 Identities=11% Similarity=0.137 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhhcCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEe
Q 012943 293 KVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVAT 372 (453)
Q Consensus 293 ~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aT 372 (453)
+.++.++++.++. .+.++.-+-.++.++- +.+.+|.+-||.+++- ..+ +++++.+.||||++.|
T Consensus 99 ~GL~~L~~~~~e~--GLpv~Tev~D~~~v~~---l~~~vd~lkIgA~~~~------n~~-----LLr~va~~gkPVilK~ 162 (298)
T 3fs2_A 99 KALEVFSDLKKEY--GFPVLTDIHTEEQCAA---VAPVVDVLQIPAFLCR------QTD-----LLIAAARTGRVVNVKK 162 (298)
T ss_dssp HHHHHHHHHHHHH--CCCEEEECCSHHHHHH---HTTTCSEEEECGGGTT------CHH-----HHHHHHHTTSEEEEEC
T ss_pred HHHHHHHHHHHhc--CCeEEEEeCCHHHHHH---HHhhCCEEEECccccC------CHH-----HHHHHHccCCcEEEeC
Confidence 4555666766554 4667777777666644 4455899999865552 333 3445558899999964
Q ss_pred chhhhhccCCCCchHHHHHHHHHHH-hCccEEEec
Q 012943 373 NMLESMIDHPTPTRAEVSDIAIAVR-EGADAVMLS 406 (453)
Q Consensus 373 qmLeSM~~~~~PtrAEv~Dv~nav~-~G~D~vmLs 406 (453)
.| .-|..|+...+..+. .|.+-++|.
T Consensus 163 Gm--------s~t~~ei~~ave~i~~~Gn~~iiL~ 189 (298)
T 3fs2_A 163 GQ--------FLAPWDMKNVLAKITESGNPNVLAT 189 (298)
T ss_dssp CT--------TCCGGGHHHHHHHHHTTTCCCEEEE
T ss_pred CC--------CCCHHHHHHHHHHHHHcCCCeEEEE
Confidence 43 146677777777665 466656653
No 426
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=26.03 E-value=1.1e+02 Score=30.05 Aligned_cols=51 Identities=14% Similarity=0.231 Sum_probs=37.0
Q ss_pred EEEecCC-CCCCHHHHHHHHHhCC---------------------cEEEeecCCCChHHHHHHHHHHHHHHhhc
Q 012943 103 IVCTIGP-STSSREMIWKLAEEGM---------------------NVARLNMSHGDHASHQKTIDLVKEYNSQF 154 (453)
Q Consensus 103 Ii~TiGP-ss~s~e~i~~Li~aGm---------------------nvaRiNfSHg~~e~~~~~I~~iR~a~~~~ 154 (453)
+.+.+.+ ..+..+..+.|.+.|+ +.+||+|++ +.++..+.++.++++.+++
T Consensus 368 ~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~-~~e~i~~~l~~l~~~~~~~ 440 (444)
T 3if2_A 368 LWLWFKDLPISTLDLYERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAA-DEQTLIDGIKVIGEVVREL 440 (444)
T ss_dssp EEEEETTCSSCHHHHHHHHHHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESSS-CHHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCCCCCHHHHHHHHHHCCeEEecchhhcCCCCCcccccCCCeEEEEEeC-CHHHHHHHHHHHHHHHHHH
Confidence 4455543 2345566777877775 468999999 9999999999998876543
No 427
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=25.84 E-value=1.5e+02 Score=28.76 Aligned_cols=55 Identities=15% Similarity=0.057 Sum_probs=33.4
Q ss_pred CCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccCCC--CHHHHHHHHHHHHHHHhc
Q 012943 365 QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGK--FPLKAVKVMHTVALRTES 431 (453)
Q Consensus 365 Gkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~--yP~eaV~~m~~I~~~aE~ 431 (453)
+.|+|.. .+.-+ ..|+..++..|+|+|++...-..+. =+....+++..+..+.+.
T Consensus 256 ~ipvia~---------GGI~~---~~d~~kal~~GAd~V~igr~~l~~~~~G~~gv~~~~~~l~~el~~ 312 (332)
T 1vcf_A 256 HLPLVAS---------GGVYT---GTDGAKALALGADLLAVARPLLRPALEGAERVAAWIGDYLEELRT 312 (332)
T ss_dssp SSCEEEE---------SSCCS---HHHHHHHHHHTCSEEEECGGGHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEE---------CCCCC---HHHHHHHHHhCCChHhhhHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 6888874 33333 5678899999999999975433111 022233556666666554
No 428
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=25.77 E-value=1.9e+02 Score=27.28 Aligned_cols=32 Identities=28% Similarity=0.355 Sum_probs=21.8
Q ss_pred HHHHHHhCccEEEecCcccCCCCHHHHHHHHHH
Q 012943 392 IAIAVREGADAVMLSGETAHGKFPLKAVKVMHT 424 (453)
Q Consensus 392 v~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~ 424 (453)
...+...|+|.+...+|+..| -+.++..-+++
T Consensus 138 ~~~a~~~Gad~I~v~G~~~~g-~~~e~~~~~~~ 169 (297)
T 2zbt_A 138 ALRRIAEGAAMIRTKGEAGTG-NVVEAVRHART 169 (297)
T ss_dssp HHHHHHTTCSEEEECCCSSSC-CTHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEcccccCc-chHHHHhhHHH
Confidence 345688999999998887777 33455544433
No 429
>2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A*
Probab=25.73 E-value=86 Score=32.02 Aligned_cols=52 Identities=23% Similarity=0.275 Sum_probs=32.8
Q ss_pred CCCHHHH-HHHHHhCCcEEEeecCCC---------ChHHHHHHHHHHHHHHhhcCCCcEEEEeecC
Q 012943 111 TSSREMI-WKLAEEGMNVARLNMSHG---------DHASHQKTIDLVKEYNSQFEDKAVAIMLDTK 166 (453)
Q Consensus 111 s~s~e~i-~~Li~aGmnvaRiNfSHg---------~~e~~~~~I~~iR~a~~~~~~~~iaIllDLk 166 (453)
....+.| +.|-+.|+|++||-++.. +.+..+.+.+.|..+ ++.+ +.+++|+-
T Consensus 65 ~~~~~di~~~l~~~G~N~VRl~v~w~~~~p~~g~~~~~~l~~l~~~v~~a-~~~G---i~vildlH 126 (481)
T 2osx_A 65 QFTEADLAREYADMGTNFVRFLISWRSVEPAPGVYDQQYLDRVEDRVGWY-AERG---YKVMLDMH 126 (481)
T ss_dssp SCCHHHHHHHHHHHCCCEEEEEECHHHHCSBTTBCCHHHHHHHHHHHHHH-HHTT---CEEEEEEC
T ss_pred cccHHHHHHHHHHCCCCEEEEeCcHHHcCCCCCCcCHHHHHHHHHHHHHH-HHCC---CEEEEEcc
Confidence 3467788 899999999999987622 123333333334333 3434 67888854
No 430
>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A*
Probab=25.70 E-value=88 Score=30.59 Aligned_cols=52 Identities=17% Similarity=0.188 Sum_probs=33.6
Q ss_pred CHHHHHHHH-HhCCcEEEeecCCC------ChHHHHHHHHHHHHHHhhcCCCcEEEEeecCCC
Q 012943 113 SREMIWKLA-EEGMNVARLNMSHG------DHASHQKTIDLVKEYNSQFEDKAVAIMLDTKGP 168 (453)
Q Consensus 113 s~e~i~~Li-~aGmnvaRiNfSHg------~~e~~~~~I~~iR~a~~~~~~~~iaIllDLkGP 168 (453)
+.+.++.|. ..|+|++||-+..+ +++.. +.++.+=+...+.+ +.+++|+-+.
T Consensus 55 ~~~d~~~l~~~~G~N~VRip~~~~~~~~~~~~~~l-~~ld~~v~~a~~~G---i~VIld~H~~ 113 (364)
T 1g01_A 55 NENAFVALSNDWGSNMIRLAMYIGENGYATNPEVK-DLVYEGIELAFEHD---MYVIVDWHVH 113 (364)
T ss_dssp SHHHHHHHHTTSCCSEEEEEEESSSSSTTTCTTHH-HHHHHHHHHHHHTT---CEEEEEEECC
T ss_pred CHHHHHHHHHHCCCCEEEEEeeeCCCCCccCHHHH-HHHHHHHHHHHHCC---CEEEEEeccC
Confidence 468899987 89999999987742 23333 33333333344444 6788888763
No 431
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3
Probab=25.64 E-value=81 Score=31.72 Aligned_cols=52 Identities=15% Similarity=0.318 Sum_probs=32.5
Q ss_pred CHHHHHHHHHhCCcEEEeecCC-------CCh---HHHHHHHHHHHHHHhhcCCCcEEEEeecCC
Q 012943 113 SREMIWKLAEEGMNVARLNMSH-------GDH---ASHQKTIDLVKEYNSQFEDKAVAIMLDTKG 167 (453)
Q Consensus 113 s~e~i~~Li~aGmnvaRiNfSH-------g~~---e~~~~~I~~iR~a~~~~~~~~iaIllDLkG 167 (453)
+.+.++.|-..|+|++||-++. |++ ....+.++.+=+..++.+ +.+++|+-+
T Consensus 75 te~d~~~i~~~G~N~VRipi~~~~~~~~~~~py~~~~~l~~ld~vv~~a~~~G---i~VilDlH~ 136 (408)
T 1h4p_A 75 QEQDFANIASQGFNLVRIPIGYWAFQILDDDPYVSGLQESYLDQAIGWARNNS---LKVWVDLHG 136 (408)
T ss_dssp CHHHHHHHHHTTCCEEEEEEEGGGTCCCTTCCCCCSSHHHHHHHHHHHHHHTT---CEEEEEEEE
T ss_pred CHHHHHHHHHCCCCEEEccCCHHHcccCCCCCCccccHHHHHHHHHHHHHHCC---CEEEEECCC
Confidence 4778999999999999997642 211 113333333333344444 778888754
No 432
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=25.49 E-value=1.3e+02 Score=29.29 Aligned_cols=63 Identities=13% Similarity=0.119 Sum_probs=45.3
Q ss_pred HHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhh--hccHHHHHhh-cCEEEEeC
Q 012943 271 EDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADS--IPNLHSIISA-SDGAMVAR 338 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~g--v~NldeI~~~-sDgImIgR 338 (453)
+.+..+++.|+|+|.+.- -+++++..+.+.+.....+++|.| --| .+|+.++++. +|++-+|.
T Consensus 208 ee~~~A~~aGaD~I~ld~-~~~~~l~~~v~~l~~~~~~~~I~A----SGGIt~~ni~~~~~aGaD~i~vGs 273 (299)
T 2jbm_A 208 QEAVQAAEAGADLVLLDN-FKPEELHPTATVLKAQFPSVAVEA----SGGITLDNLPQFCGPHIDVISMGM 273 (299)
T ss_dssp HHHHHHHHTTCSEEEEES-CCHHHHHHHHHHHHHHCTTSEEEE----ESSCCTTTHHHHCCTTCCEEECTH
T ss_pred HHHHHHHHcCCCEEEECC-CCHHHHHHHHHHhhccCCCeeEEE----ECCCCHHHHHHHHHCCCCEEEECh
Confidence 446667788999999976 468888888887765445565554 223 3778888776 89988874
No 433
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=25.39 E-value=1.7e+02 Score=28.15 Aligned_cols=85 Identities=19% Similarity=0.277 Sum_probs=52.8
Q ss_pred hhccHHHHHhh---cCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHH
Q 012943 320 SIPNLHSIISA---SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAV 396 (453)
Q Consensus 320 gv~NldeI~~~---sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav 396 (453)
...+++++++. .|.++|+ .| +.....++.+|-++||+|++ .+-...+.+|...+..+.
T Consensus 68 ~~~~~~~ll~~~~~vD~V~i~-------tp----~~~H~~~~~~al~aGkhVl~--------EKP~a~~~~e~~~l~~~a 128 (330)
T 4ew6_A 68 SYTTIEAMLDAEPSIDAVSLC-------MP----PQYRYEAAYKALVAGKHVFL--------EKPPGATLSEVADLEALA 128 (330)
T ss_dssp EESSHHHHHHHCTTCCEEEEC-------SC----HHHHHHHHHHHHHTTCEEEE--------CSSSCSSHHHHHHHHHHH
T ss_pred ccCCHHHHHhCCCCCCEEEEe-------CC----cHHHHHHHHHHHHcCCcEEE--------eCCCCCCHHHHHHHHHHH
Confidence 45688999876 7999986 22 45667888888899999987 233356777777776655
Q ss_pred Hh-CccEEEecCcccCCCCHHHHHHHHHHHHHH
Q 012943 397 RE-GADAVMLSGETAHGKFPLKAVKVMHTVALR 428 (453)
Q Consensus 397 ~~-G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~ 428 (453)
.. |. .+|. +..-. -+ .+++.+++++.+
T Consensus 129 ~~~g~-~~~v-~~~~r-~~--p~~~~~k~~i~~ 156 (330)
T 4ew6_A 129 NKQGA-SLFA-SWHSR-YA--PAVEAAKAFLAS 156 (330)
T ss_dssp HHHTC-CEEE-CCGGG-GS--TTHHHHHHHHHS
T ss_pred HhcCC-eEEE-Eehhh-cc--HHHHHHHHHHhc
Confidence 43 33 2222 22211 12 256666666654
No 434
>4e8b_A Ribosomal RNA small subunit methyltransferase E; 16S rRNA methyltransferase; 2.25A {Escherichia coli}
Probab=25.04 E-value=1.6e+02 Score=27.69 Aligned_cols=72 Identities=17% Similarity=0.206 Sum_probs=44.0
Q ss_pred ccccCCEEEEeCCe---eEEEEEEEeCCeEEEEEeeCcEecccc--eeecCCCccCCCCCCHhhHHHHHhhhhcCCcEEE
Q 012943 211 DVEVGDILLVDGGM---MSLAVKSKTKDLVKCIVVDGGELKSRR--HLNVRGKSANLPSITDKDWEDIKFGVDNQVDFYA 285 (453)
Q Consensus 211 ~vk~Gd~IlIDDG~---I~L~V~ev~~~~v~~~V~ngG~L~s~K--gVnlp~~~~~lp~ltekD~~DI~~a~~~gvd~I~ 285 (453)
-+++||.|.+-||. ...+|.+++++.+.+++...-...... .|.+ -..+|. .++-..-|+-+.+.|++-|.
T Consensus 33 R~~~Gd~v~l~dg~g~~~~a~I~~i~~~~~~~~i~~~~~~~~e~~~~v~L---~~al~K-~~r~e~ilqkatELGv~~I~ 108 (251)
T 4e8b_A 33 RMGPGQALQLFDGSNQVFDAEITSASKKSVEVKVLEGQIDDRESPLHIHL---GQVMSR-GEKMEFTIQKSIELGVSLIT 108 (251)
T ss_dssp CCCSCCEEEEECSSSEEEEEEEEEECSSCEEEEEEEEEECCCCCSSEEEE---EEECCS-SSHHHHHHHHHHHTTCCEEE
T ss_pred cCCCCCEEEEEeCCCcEEEEEEEEeecceEEEEEeeeecCCCCCCceEEE---EEEeec-hhHHHHHHHHHHhhCCCEEE
Confidence 46899999987653 567888888888888876422221111 1111 011222 23444556788999999875
Q ss_pred e
Q 012943 286 V 286 (453)
Q Consensus 286 l 286 (453)
.
T Consensus 109 p 109 (251)
T 4e8b_A 109 P 109 (251)
T ss_dssp E
T ss_pred E
Confidence 4
No 435
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=24.93 E-value=91 Score=30.21 Aligned_cols=53 Identities=15% Similarity=0.198 Sum_probs=33.3
Q ss_pred CCCHHHHHHHH-HhCCcEEEeecCCCC------hHHHHHHHHHHHHHHhhcCCCcEEEEeecCC
Q 012943 111 TSSREMIWKLA-EEGMNVARLNMSHGD------HASHQKTIDLVKEYNSQFEDKAVAIMLDTKG 167 (453)
Q Consensus 111 s~s~e~i~~Li-~aGmnvaRiNfSHg~------~e~~~~~I~~iR~a~~~~~~~~iaIllDLkG 167 (453)
..+.+.++.|. +.|+|++|+-+.+.. ++.+ +.++.+=++..+.| +.+++|+-+
T Consensus 68 ~~~~~~~~~l~~~~G~N~VRi~~~~~~~~~~~~~~~~-~~ld~~v~~a~~~G---i~VilD~H~ 127 (327)
T 3pzt_A 68 YVNKDSLKWLRDDWGITVFRAAMYTADGGYIDNPSVK-NKVKEAVEAAKELG---IYVIIDWHI 127 (327)
T ss_dssp GCSHHHHHHHHHHTCCSEEEEEEESSTTSTTTCGGGH-HHHHHHHHHHHHHT---CEEEEEEEC
T ss_pred CCCHHHHHHHHHhcCCCEEEEEeEECCCCcccCHHHH-HHHHHHHHHHHHCC---CEEEEEecc
Confidence 34677889886 589999999776432 2333 33333334444555 667888754
No 436
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=24.91 E-value=1.5e+02 Score=29.23 Aligned_cols=60 Identities=15% Similarity=0.256 Sum_probs=40.3
Q ss_pred CcEEEEecCCCCCCHH----HHHHHHHhCCcEEEeecCCCChHHHHHHHHHHHHHHhhcCCCcEEEEeec
Q 012943 100 KTKIVCTIGPSTSSRE----MIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDT 165 (453)
Q Consensus 100 ~TKIi~TiGPss~s~e----~i~~Li~aGmnvaRiNfSHg~~e~~~~~I~~iR~a~~~~~~~~iaIllDL 165 (453)
+.....|+|- .+++ ..+++.++|-+.+.+++.|++.+.-.+.++.+|+ ..+ ..+.|++|.
T Consensus 134 ~v~~~~~~~~--~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v~avr~---a~g-~~~~l~vDa 197 (378)
T 2qdd_A 134 PVPINSSIST--GTPDQMLGLIAEAAAQGYRTHSAKIGGSDPAQDIARIEAISA---GLP-DGHRVTFDV 197 (378)
T ss_dssp CEEBEEEECS--CCHHHHHHHHHHHHHHTCCEEEEECCSSCHHHHHHHHHHHHH---SCC-TTCEEEEEC
T ss_pred CCceEEEecC--CCHHHHHHHHHHHHHHhhhheeecCCCCChHHHHHHHHHHHH---HhC-CCCEEEEeC
Confidence 4556678764 2343 3566788999999999999877666666666665 344 345566774
No 437
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A
Probab=24.83 E-value=68 Score=32.46 Aligned_cols=51 Identities=10% Similarity=0.255 Sum_probs=32.5
Q ss_pred CHHHHHHHHHhCCcEEEeecCC-------CChH--HHHHHHHHHHHHHhhcCCCcEEEEeecC
Q 012943 113 SREMIWKLAEEGMNVARLNMSH-------GDHA--SHQKTIDLVKEYNSQFEDKAVAIMLDTK 166 (453)
Q Consensus 113 s~e~i~~Li~aGmnvaRiNfSH-------g~~e--~~~~~I~~iR~a~~~~~~~~iaIllDLk 166 (453)
+.+.++.|-.+|+|++||-+++ +++- ...+.++.+=+...+.+ +.+++||-
T Consensus 75 te~D~~~ik~~G~N~VRipi~~~~~~~~~~~py~~~~~~~ld~vV~~a~~~G---l~VILDlH 134 (399)
T 3n9k_A 75 TEQDFKQISNLGLNFVRIPIGYWAFQLLDNDPYVQGQVQYLEKALGWARKNN---IRVWIDLH 134 (399)
T ss_dssp CHHHHHHHHHTTCCEEEEEEEGGGTCCCTTCCCCCCHHHHHHHHHHHHHHTT---CEEEEEEE
T ss_pred cHHHHHHHHHcCCCEEEEcccHHHccCCCCCccchhHHHHHHHHHHHHHHCC---CEEEEEec
Confidence 5788999999999999998862 2220 12233333334444444 78899974
No 438
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=24.82 E-value=1.3e+02 Score=30.23 Aligned_cols=54 Identities=13% Similarity=0.103 Sum_probs=34.2
Q ss_pred CCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCccc----CCCCHHHHHHHHHHHHHHHhcC
Q 012943 365 QKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETA----HGKFPLKAVKVMHTVALRTESS 432 (453)
Q Consensus 365 Gkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA----~G~yP~eaV~~m~~I~~~aE~~ 432 (453)
..|+|.. .+.-+ -.|++.++..|+|+||+..--- .| |-...+++..+..+.+..
T Consensus 267 ~ipvia~---------GGI~~---~~d~~kal~lGA~~v~ig~~~l~~~~~G--~~~v~~~l~~l~~eL~~~ 324 (368)
T 3vkj_A 267 DSFLVGS---------GGIRS---GLDAAKAIALGADIAGMALPVLKSAIEG--KESLEQFFRKIIFELKAA 324 (368)
T ss_dssp TCEEEEE---------SSCCS---HHHHHHHHHHTCSEEEECHHHHHHHHHC--HHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEE---------CCCCC---HHHHHHHHHcCCCEEEEcHHHHHHHhcC--hHHHHHHHHHHHHHHHHH
Confidence 3677763 44444 5678899999999999974322 13 333445666666666543
No 439
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=24.78 E-value=1.4e+02 Score=29.04 Aligned_cols=87 Identities=13% Similarity=0.068 Sum_probs=54.9
Q ss_pred hhccHHHHHhh--cCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHH
Q 012943 320 SIPNLHSIISA--SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVR 397 (453)
Q Consensus 320 gv~NldeI~~~--sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~ 397 (453)
...+++++++. .|.++|+ .| ......++.+|-++||+|++= +-...+.+|...+..+..
T Consensus 76 ~~~~~~~ll~~~~vD~V~I~-------tp----~~~H~~~~~~al~aGkhVl~E--------KPla~~~~ea~~l~~~a~ 136 (361)
T 3u3x_A 76 RIATAEEILEDENIGLIVSA-------AV----SSERAELAIRAMQHGKDVLVD--------KPGMTSFDQLAKLRRVQA 136 (361)
T ss_dssp EESCHHHHHTCTTCCEEEEC-------CC----HHHHHHHHHHHHHTTCEEEEE--------SCSCSSHHHHHHHHHHHH
T ss_pred ccCCHHHHhcCCCCCEEEEe-------CC----hHHHHHHHHHHHHCCCeEEEe--------CCCCCCHHHHHHHHHHHH
Confidence 45788999875 7999996 22 345677888899999999982 333677778777777665
Q ss_pred hCccEEEecCcccCCCCHHHHHHHHHHHHHH
Q 012943 398 EGADAVMLSGETAHGKFPLKAVKVMHTVALR 428 (453)
Q Consensus 398 ~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~ 428 (453)
. ....+.-+..-.-.+| +++.+++++.+
T Consensus 137 ~-~g~~l~v~~~~R~~~p--~~~~~k~~i~~ 164 (361)
T 3u3x_A 137 E-TGRIFSILYSEHFESP--ATVKAGELVAA 164 (361)
T ss_dssp T-TCCCEEEECHHHHTCH--HHHHHHHHHHT
T ss_pred H-cCCEEEEechHhhCCH--HHHHHHHHHHc
Confidence 3 2222221111111123 66777777654
No 440
>3ijd_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein structure initiative; HET: C2F; 2.00A {Clostridium thermocellum atcc 27405}
Probab=24.72 E-value=1.8e+02 Score=28.68 Aligned_cols=115 Identities=10% Similarity=0.182 Sum_probs=71.2
Q ss_pred hhHHHHHhhhhcCCcEEEeccccCHHHHHHHH----HHHHhcCC-CceEEEEe---cChhhhccHHHHHhh--cCE---E
Q 012943 268 KDWEDIKFGVDNQVDFYAVSFVKDAKVVHELK----DYLKSCNA-DIHVIVKI---ESADSIPNLHSIISA--SDG---A 334 (453)
Q Consensus 268 kD~~DI~~a~~~gvd~I~lSfV~sa~dv~~v~----~~L~~~~~-~i~IIakI---ET~~gv~NldeI~~~--sDg---I 334 (453)
.|.+-|+.=+++|+||+.--++-+++.+..+. +.+.+.|- .++|++=| -|...++.+. +.-+ .+- .
T Consensus 166 ~d~~~Lk~KvdAGAdf~ITQ~ffD~e~~~~f~~~~~~~~r~~Gi~~vPIipGImPi~s~k~~~f~~-~~G~~IP~~l~~~ 244 (315)
T 3ijd_A 166 DEHLRIIDKINKGCKYFITQAVYNVEAAKDFLSDYYYYSKNNNLKMVPIIFTLTPCGSTKTLEFMK-WLGISIPRWLEND 244 (315)
T ss_dssp CHHHHHHHHHHTTCCEEEESCCCCHHHHHHHHHHHHHHHHHTTBCCCCEEEEECCCCSHHHHHHHH-HHTCCCCHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEccccCCHHHHHHHHHHHHHHHHHCCCCCCcEEEEeeecCCHHHHHHHh-cCCCCCCHHHHHH
Confidence 46677777789999999999999999988877 44556676 78898865 4444433332 1111 000 0
Q ss_pred EEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHH
Q 012943 335 MVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSD 391 (453)
Q Consensus 335 mIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~D 391 (453)
|-+-.| ..+.|++-....-++++..|...|.|.++- .| +..--+.|+..
T Consensus 245 l~~~~d-~~~~Gi~~a~e~~~~L~~~~~g~~~p~G~n---ie----sv~~rk~ei~a 293 (315)
T 3ijd_A 245 LMNCED-ILNKSVSLSKSIFNELMEFCLEKGIPIGCN---IE----SVSVRKVEIEA 293 (315)
T ss_dssp HHTTCC-CHHHHHHHHHHHHHHHHHHHHHHTCCEEEE---EE----ECCSCHHHHHH
T ss_pred HHhCCC-HHHHHHHHHHHHHHHHHHhcCcCCcCCCcc---HH----HHHhHHHHHHH
Confidence 001123 233444444455578888999999999875 33 34445666554
No 441
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=24.53 E-value=95 Score=30.21 Aligned_cols=50 Identities=16% Similarity=0.153 Sum_probs=37.4
Q ss_pred EEEecCCCCCCHHHHHHHHHhCC-------------cEEEeecCCCChHHHHHHHHHHHHHHhh
Q 012943 103 IVCTIGPSTSSREMIWKLAEEGM-------------NVARLNMSHGDHASHQKTIDLVKEYNSQ 153 (453)
Q Consensus 103 Ii~TiGPss~s~e~i~~Li~aGm-------------nvaRiNfSHg~~e~~~~~I~~iR~a~~~ 153 (453)
+...+. ..+..+..+.|.+.|+ +.+||+|++-+.++..+.++.++++.++
T Consensus 374 ~~~~~~-~~~~~~l~~~L~~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~~~~ 436 (437)
T 3g0t_A 374 FTVGYK-GMDSSKLIEKFVRYGMCAITLKTTGSKRNEAMRICTSLLPESQFPDLEKRLQMLNAE 436 (437)
T ss_dssp EEEEET-TCCHHHHHHHHHHTTEECEESTTTTCCCTTCEEEECSSSCGGGHHHHHHHHHHHHHH
T ss_pred EEEecC-CCCHHHHHHHHHHcCeEEeeccccCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHhc
Confidence 344443 3345667778888875 6799999988999999999999887653
No 442
>4e2u_A PHO RADA intein; HINT-fold, unknown function; 1.58A {Pyrococcus horikoshii} PDB: 2lqm_A 4e2t_A*
Probab=24.49 E-value=1.4e+02 Score=26.07 Aligned_cols=39 Identities=21% Similarity=0.152 Sum_probs=25.0
Q ss_pred eeecCCCEEEEEeecCCCCccEEEecc----cccccccccCCEEEEeCC
Q 012943 179 IILKEGQEFNFTIKRGVSTEDTVSVNY----DDFVNDVEVGDILLVDGG 223 (453)
Q Consensus 179 i~L~~G~~v~lt~~~~~~~~~~I~v~~----~~l~~~vk~Gd~IlIDDG 223 (453)
+.+..|.+++.|.+ ..+++.. --...+|++||.|++.+|
T Consensus 83 i~t~~G~~i~~T~~------Hp~~~~~~~~~w~~a~~L~~Gd~l~~~~g 125 (168)
T 4e2u_A 83 IKLSSGYSLKVTPS------HPVLLFRDGLQWVPAAEVKPGDVVVGVRN 125 (168)
T ss_dssp EEETTSCEEEECTT------CEEEEESSSEEEEEGGGCCTTCEEEEEET
T ss_pred EEECCCCEEEECCC------CcEEEEcCCCEEEEHHHCCCCCEEEeccC
Confidence 45566777666644 2333311 124578999999999997
No 443
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=24.48 E-value=3.8e+02 Score=23.93 Aligned_cols=120 Identities=6% Similarity=0.020 Sum_probs=68.4
Q ss_pred HHHHhhhhcCCcEEEecccc------CHHHHHHHHHHHHhcCCCceEEEE---ecC--hhhhccHHHHHhh-----cCEE
Q 012943 271 EDIKFGVDNQVDFYAVSFVK------DAKVVHELKDYLKSCNADIHVIVK---IES--ADSIPNLHSIISA-----SDGA 334 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lSfV~------sa~dv~~v~~~L~~~~~~i~IIak---IET--~~gv~NldeI~~~-----sDgI 334 (453)
+.++.+.+.|.|+|-+..-. +..++.++++.+.+.|-.+..+.- +.. .+.++.+.+.+.. ++.|
T Consensus 23 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v 102 (272)
T 2q02_A 23 AFFRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEIVTINAVYPFNQLTEEVVKKTEGLLRDAQGVGARAL 102 (272)
T ss_dssp HHHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEEEEEEEETTTTSCCHHHHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHcCCCEEEeeccccccccccccCHHHHHHHHHHcCCeEEechhhhccCCcHHHHHHHHHHHHHHHHHhCCCEE
Confidence 55677788999999886321 346788889999887654432221 111 1223333333332 4677
Q ss_pred EEeCCCccccCCCCCH-HHHHHHHHHHHHHcCCCEEEEechhhhhc--cCCCCchHHHHHHHHHH
Q 012943 335 MVARGDLGAELPIEDV-PLLQEDIIRRCRSMQKPVIVATNMLESMI--DHPTPTRAEVSDIAIAV 396 (453)
Q Consensus 335 mIgRGDLg~elg~e~v-~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~--~~~~PtrAEv~Dv~nav 396 (453)
.+.+|.-+. -.+..+ ....+++...|.++|..+.+ |.+- .+...|..++.++...+
T Consensus 103 ~~~~g~~~~-~~~~~~~~~~l~~l~~~a~~~gv~l~~-----E~~~~~~~~~~~~~~~~~l~~~v 161 (272)
T 2q02_A 103 VLCPLNDGT-IVPPEVTVEAIKRLSDLFARYDIQGLV-----EPLGFRVSSLRSAVWAQQLIREA 161 (272)
T ss_dssp EECCCCSSB-CCCHHHHHHHHHHHHHHHHTTTCEEEE-----CCCCSTTCSCCCHHHHHHHHHHH
T ss_pred EEccCCCch-hHHHHHHHHHHHHHHHHHHHcCCEEEE-----EecCCCcccccCHHHHHHHHHHh
Confidence 766554322 123345 66668888888888877655 3331 12344556666665555
No 444
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=24.42 E-value=2.3e+02 Score=27.50 Aligned_cols=84 Identities=15% Similarity=0.210 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhhcCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEe
Q 012943 293 KVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVAT 372 (453)
Q Consensus 293 ~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aT 372 (453)
+.+..++++.++. .+.++.-+-.++.++-+. +.+|.+-||.+++. ..+ +++++...||||++.|
T Consensus 75 ~GL~~L~~~~~e~--Glp~~tev~d~~~v~~l~---~~vd~lkIgA~~~~------n~~-----LLr~~a~~gkPVilK~ 138 (288)
T 3tml_A 75 EGLRILSEVKRQL--GLPVLTDVHSIDEIEQVA---SVVDVLQTPAFLCR------QTD-----FIHACARSGKPVNIKK 138 (288)
T ss_dssp HHHHHHHHHHHHH--CCCEEEECCSGGGHHHHH---HHCSEEEECGGGTT------CHH-----HHHHHHTSSSCEEEEC
T ss_pred HHHHHHHHHHHhc--CCeEEEEeCCHHHHHHHH---HhCCEEEECccccc------CHH-----HHHHHHccCCcEEEeC
Confidence 4455666666554 566788777777765554 45899999866542 333 3445668999999964
Q ss_pred chhhhhccCCCCchHHHHHHHHHHHh-Cc
Q 012943 373 NMLESMIDHPTPTRAEVSDIAIAVRE-GA 400 (453)
Q Consensus 373 qmLeSM~~~~~PtrAEv~Dv~nav~~-G~ 400 (453)
.|- -|..|+...+..+.. |.
T Consensus 139 G~~--------~t~~e~~~ave~i~~~Gn 159 (288)
T 3tml_A 139 GQF--------LAPHDMKNVIDKARDAAR 159 (288)
T ss_dssp CTT--------CCTTHHHHHHHHHHHHHH
T ss_pred CCC--------CCHHHHHHHHHHHHHcCC
Confidence 421 356677777666653 54
No 445
>3oru_A DUF1989 family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, metal binding PR; HET: MSE; 1.11A {Ruegeria SP} PDB: 3siy_A*
Probab=24.41 E-value=1.2e+02 Score=28.81 Aligned_cols=55 Identities=16% Similarity=0.172 Sum_probs=37.6
Q ss_pred ceeecCCCEEEEEeecCCCCccEEEecccccc--------------cccccCCEEEEeCCeeEEEEEEE
Q 012943 178 PIILKEGQEFNFTIKRGVSTEDTVSVNYDDFV--------------NDVEVGDILLVDGGMMSLAVKSK 232 (453)
Q Consensus 178 ~i~L~~G~~v~lt~~~~~~~~~~I~v~~~~l~--------------~~vk~Gd~IlIDDG~I~L~V~ev 232 (453)
...|++||.++|+.-.+.-....+..|.++.. -.+.+|+.++=+.|+..++|++-
T Consensus 46 s~~v~~Gq~lRI~d~eG~Q~~D~l~~na~d~~Er~s~~~T~~~q~~~~lt~G~~L~S~~gRpl~tIv~D 114 (234)
T 3oru_A 46 AIRMAQGEALMVINRDGSQIGDFWAFVEGDCGEYLSMEHLRPTLRRVSPRPGDVLVSNRRRPILTLLED 114 (234)
T ss_dssp EEEECTTCEEEEECSSSSCCEEEEEEETTEEEEEBCHHHHHHHHTSSSCCTTCEEEBTTSSEEEEEEEE
T ss_pred EEEECCCCEEEEEeCCCCeEEEEEEecCCCCccccCHHHHHHHhccccCCCCCEeEeCCCCeeEEEEcc
Confidence 47899999999986543222233333333221 25789999999999999998764
No 446
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=24.23 E-value=6e+02 Score=26.11 Aligned_cols=111 Identities=13% Similarity=0.057 Sum_probs=74.1
Q ss_pred hHHHHHhhhhcCCcEEEe-----ccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh-cCEEEEeCCCcc
Q 012943 269 DWEDIKFGVDNQVDFYAV-----SFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLG 342 (453)
Q Consensus 269 D~~DI~~a~~~gvd~I~l-----SfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~-sDgImIgRGDLg 342 (453)
|...+..+.+.|+..|.+ .|-.+.+|+..+++.. +++|+.|==-.... .+.|.... +|+|.+=-.-|.
T Consensus 69 ~~~~iA~~y~~~A~~IsvLTd~~~F~gs~~dL~~vr~~v-----~lPvLrKDFI~d~~-Qi~ea~~~GAD~ILLi~a~l~ 142 (452)
T 1pii_A 69 DPARIAAIYKHYASAISVLTDEKYFQGSFNFLPIVSQIA-----PQPILCKDFIIDPY-QIYLARYYQADACLLMLSVLD 142 (452)
T ss_dssp CHHHHHHHHTTTCSEEEEECCSTTTCCCTTHHHHHHHHC-----CSCEEEESCCCSHH-HHHHHHHTTCSEEEEETTTCC
T ss_pred CHHHHHHHHHhhCcEEEEEecccccCCCHHHHHHHHHhc-----CCCeEEEeccCCHH-HHHHHHHcCCCEEEEEcccCC
Confidence 556666665666888877 5567899999998865 57787762112233 25554333 898887544332
Q ss_pred ccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecC
Q 012943 343 AELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSG 407 (453)
Q Consensus 343 ~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ 407 (453)
..-.+.++..|++.|..+++-. -+.+ ++..++..|+|.+-.+.
T Consensus 143 --------~~~l~~l~~~a~~lgm~~LvEv-----------h~~e---E~~~A~~lga~iIGinn 185 (452)
T 1pii_A 143 --------DDQYRQLAAVAHSLEMGVLTEV-----------SNEE---EQERAIALGAKVVGINN 185 (452)
T ss_dssp --------HHHHHHHHHHHHHTTCEEEEEE-----------CSHH---HHHHHHHTTCSEEEEES
T ss_pred --------HHHHHHHHHHHHHcCCeEEEEe-----------CCHH---HHHHHHHCCCCEEEEeC
Confidence 2456788899999999998842 2333 45678888999887654
No 447
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=24.11 E-value=1.4e+02 Score=29.68 Aligned_cols=62 Identities=15% Similarity=0.233 Sum_probs=40.7
Q ss_pred CcEEEEecCCCCCCHH----HHHHHHHhCCcEEEeecCCCChHHHHHHHHHHHHHHhhcCCCcEEEEeec
Q 012943 100 KTKIVCTIGPSTSSRE----MIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDT 165 (453)
Q Consensus 100 ~TKIi~TiGPss~s~e----~i~~Li~aGmnvaRiNfSHg~~e~~~~~I~~iR~a~~~~~~~~iaIllDL 165 (453)
+....+|+|....+.+ ..+++.++|-+.+.|++.|++.+.-.+.++.||+ ..+ ..+.|++|.
T Consensus 132 ~vp~y~~~~~~~~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~---a~G-~~~~l~vDa 197 (389)
T 2oz8_A 132 RVKAYASGLDFHLDDDAFVSLFSHAASIGYSAFKIKVGHRDFDRDLRRLELLKT---CVP-AGSKVMIDP 197 (389)
T ss_dssp EEEEEEECCBTTCCHHHHHHHHHHHHHTTCCEEEEECCCSSHHHHHHHHHHHHT---TSC-TTCEEEEEC
T ss_pred ceEEEEeCCCcCCCHHHHHHHHHHHHHhCCCEEEEccCCCCHHHHHHHHHHHHH---hhC-CCCeEEEEC
Confidence 4456667654222333 3566788999999999999888766666666664 344 446666775
No 448
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=23.95 E-value=1e+02 Score=29.57 Aligned_cols=47 Identities=11% Similarity=0.142 Sum_probs=35.4
Q ss_pred hhccHHHHHhhcCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 012943 320 SIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (453)
Q Consensus 320 gv~NldeI~~~sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~a 371 (453)
..+-++|+++.+|++.|+.|=|. ++.......+++.+++.++|+++=
T Consensus 48 ~~~e~~e~~~~a~alvIn~G~l~-----~~~~~~~~~a~~~a~~~~~PvVlD 94 (273)
T 3dzv_A 48 DPREFPQMFQQTSALVLNLGHLS-----QEREQSLLAASDYARQVNKLTVVD 94 (273)
T ss_dssp CGGGHHHHHTTCSEEEEECCSCC-----HHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CHHHHHHHHHHCCeEEEecCCCC-----hHHHHHHHHHHHHHHHcCCcEEEc
Confidence 35667888888999999977553 234456677778899999998774
No 449
>3kw2_A Probable R-RNA methyltransferase; structural genomics, unknown function, PSI-2, protein structure initiative; HET: MSE ADN; 2.00A {Porphyromonas gingivalis atcc 33277}
Probab=23.92 E-value=1.9e+02 Score=27.42 Aligned_cols=73 Identities=11% Similarity=0.109 Sum_probs=42.0
Q ss_pred ccccCCEEEEeCC---eeEEEEEEEeCCeEEEEEeeCcEecccc--eeecCCCccCCCCCCHhhHHHHHhhhhcCCcEEE
Q 012943 211 DVEVGDILLVDGG---MMSLAVKSKTKDLVKCIVVDGGELKSRR--HLNVRGKSANLPSITDKDWEDIKFGVDNQVDFYA 285 (453)
Q Consensus 211 ~vk~Gd~IlIDDG---~I~L~V~ev~~~~v~~~V~ngG~L~s~K--gVnlp~~~~~lp~ltekD~~DI~~a~~~gvd~I~ 285 (453)
-+++||.|.+-|| ....++.+++++.+.+++..--...... .|.+= ..+|.-.++-..-|+-+.+.|++-|.
T Consensus 32 Rl~~Gd~v~l~dg~g~~~~a~I~~i~~~~~~~~i~~~~~~~~e~~~~i~L~---~al~K~~dr~d~iiqKatELGV~~I~ 108 (257)
T 3kw2_A 32 RMQAGDRLRLTDGRGSFFDAVIETADRKSCYVSVCGQESWQKPWRDRITIA---IAPTKQSERMEWMLEKLVEIGVDEVV 108 (257)
T ss_dssp CCCTTCEEEEECSBSEEEEEEEEEECSSCEEEEEEEEEECCCSSCSCEEEE---ECCCSSHHHHHHHHHHHHHHCCSEEE
T ss_pred cCCCCCEEEEEECCCCEEEEEEEEeeCCEEEEEEEEecccCCCCCCceEEE---EecCCCcchHHHHHHHHHhhCCCEEE
Confidence 4578999999775 3456777888888888776522211111 11110 01222113333446778999999765
Q ss_pred e
Q 012943 286 V 286 (453)
Q Consensus 286 l 286 (453)
.
T Consensus 109 p 109 (257)
T 3kw2_A 109 F 109 (257)
T ss_dssp E
T ss_pred E
Confidence 3
No 450
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=23.92 E-value=72 Score=31.56 Aligned_cols=50 Identities=22% Similarity=0.320 Sum_probs=31.5
Q ss_pred HHHHHHHHhCCcEEEeecCCCC---hHHHHHHHHHHHHHHhhcCCCcEEEEeecCCC
Q 012943 115 EMIWKLAEEGMNVARLNMSHGD---HASHQKTIDLVKEYNSQFEDKAVAIMLDTKGP 168 (453)
Q Consensus 115 e~i~~Li~aGmnvaRiNfSHg~---~e~~~~~I~~iR~a~~~~~~~~iaIllDLkGP 168 (453)
+.|+.|-+.|+|++|+-++-+. ..+.+. ++.+=++..+.+ +.+++|+-+.
T Consensus 58 ~~i~~lk~~G~N~VRip~~~~~~~~~~~l~~-ld~~v~~a~~~G---iyVIlDlH~~ 110 (345)
T 3jug_A 58 TAIPAIAEQGANTIRIVLSDGGQWEKDDIDT-VREVIELAEQNK---MVAVVEVHDA 110 (345)
T ss_dssp HHHHHHHHTTCSEEEEEECCSSSSCCCCHHH-HHHHHHHHHTTT---CEEEEEECTT
T ss_pred HHHHHHHHcCCCEEEEEecCCCccCHHHHHH-HHHHHHHHHHCC---CEEEEEeccC
Confidence 5788999999999999876432 222222 222223333434 7788898765
No 451
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=23.87 E-value=1.1e+02 Score=29.39 Aligned_cols=86 Identities=12% Similarity=0.111 Sum_probs=49.9
Q ss_pred hhccHHHHHhh--cCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHH
Q 012943 320 SIPNLHSIISA--SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVR 397 (453)
Q Consensus 320 gv~NldeI~~~--sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~ 397 (453)
...+++++++- .|+|+|+ .| ......++.+|-++||+|++ .+-...+.+|...+..+..
T Consensus 82 ~y~d~~ell~~~~iDaV~Ia-------tP----~~~H~~~a~~al~aGkhVl~--------EKPla~~~~ea~~l~~~a~ 142 (393)
T 4fb5_A 82 ATADWRALIADPEVDVVSVT-------TP----NQFHAEMAIAALEAGKHVWC--------EKPMAPAYADAERMLATAE 142 (393)
T ss_dssp EESCHHHHHHCTTCCEEEEC-------SC----GGGHHHHHHHHHHTTCEEEE--------CSCSCSSHHHHHHHHHHHH
T ss_pred ecCCHHHHhcCCCCcEEEEC-------CC----hHHHHHHHHHHHhcCCeEEE--------ccCCcccHHHHHHhhhhHH
Confidence 45788998874 7999996 23 23445566677778888887 2444666677666666554
Q ss_pred hCccEEEecCcccCCCCHHHHHHHHHHHHHH
Q 012943 398 EGADAVMLSGETAHGKFPLKAVKVMHTVALR 428 (453)
Q Consensus 398 ~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~ 428 (453)
.- ..++.-+..- .| -.+++.+++++.+
T Consensus 143 ~~-g~~l~vg~~~--R~-~p~~~~~k~~i~~ 169 (393)
T 4fb5_A 143 RS-GKVAALGYNY--IQ-NPVMRHIRKLVGD 169 (393)
T ss_dssp HS-SSCEEECCGG--GG-CHHHHHHHHHHHT
T ss_pred hc-CCcccccccc--cc-ChHHHHHHHHHHc
Confidence 32 2222211111 11 1356667776654
No 452
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=23.87 E-value=4.6e+02 Score=24.68 Aligned_cols=139 Identities=15% Similarity=0.048 Sum_probs=72.4
Q ss_pred CCCHhhHHHHHhhhhcCCcEEEec-c-c-----------cCHHHHHHHHHHHHhcCCCceEEEEecChhh---hccHHHH
Q 012943 264 SITDKDWEDIKFGVDNQVDFYAVS-F-V-----------KDAKVVHELKDYLKSCNADIHVIVKIESADS---IPNLHSI 327 (453)
Q Consensus 264 ~ltekD~~DI~~a~~~gvd~I~lS-f-V-----------~sa~dv~~v~~~L~~~~~~i~IIakIET~~g---v~NldeI 327 (453)
.++.+|.---+.+-+.|+|.|.++ + + -+.+++...-+.+.+ +.+++|++=+|+-=| ++|...+
T Consensus 24 ~~~ayD~~sA~~~~~aG~dai~vg~~s~a~~~G~pD~~~vt~~em~~~~~~I~r-~~~~pviaD~~~Gyg~~~~~~~~~l 102 (255)
T 2qiw_A 24 LPTVWDTWSAGLVEEAGFSGLTIGSHPVADATGSSDGENMNFADYMAVVKKITS-AVSIPVSVDVESGYGLSPADLIAQI 102 (255)
T ss_dssp CCEESSHHHHHHHHHTTCSCEEECHHHHHHHTTCCTTTCSCHHHHHHHHHHHHH-HCSSCEEEECTTCTTCCHHHHHHHH
T ss_pred EecCcCHHHHHHHHHcCCCEEEEChHHHHHhCCCCCCCCcCHHHHHHHHHHHHh-cCCCCEEeccCCCcCcHHHHHHHHH
Confidence 345666655555566788888876 2 1 111122211122222 224789999986533 7778888
Q ss_pred Hhh-cCEEEEeCCCc--ccc-CCCCCHHHHHHHHHHHHHHcCCCE--EEEechhhhhccCCC-CchH-H-HHHHHHHHHh
Q 012943 328 ISA-SDGAMVARGDL--GAE-LPIEDVPLLQEDIIRRCRSMQKPV--IVATNMLESMIDHPT-PTRA-E-VSDIAIAVRE 398 (453)
Q Consensus 328 ~~~-sDgImIgRGDL--g~e-lg~e~v~~aqk~Ii~~c~~aGkpv--i~aTqmLeSM~~~~~-PtrA-E-v~Dv~nav~~ 398 (453)
+++ ++||-|--+.- +-+ ++.++...-.+.+..+++..|.|. +-=|.-+ ....+. .... | +.+.--+...
T Consensus 103 ~~aGa~gv~iEd~~~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~--~~g~~~~~~~~~~ai~ra~a~~eA 180 (255)
T 2qiw_A 103 LEAGAVGINVEDVVHSEGKRVREAQEHADYIAAARQAADVAGVDVVINGRTDAV--KLGADVFEDPMVEAIKRIKLMEQA 180 (255)
T ss_dssp HHTTCCEEEECSEEGGGTTEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHH--HHCTTTSSSHHHHHHHHHHHHHHH
T ss_pred HHcCCcEEEECCCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCeEEEEEechh--hccCCcchHHHHHHHHHHHHHHHc
Confidence 776 67887743320 000 111233333344444444459993 3333321 111111 1122 2 6777777788
Q ss_pred CccEEEe
Q 012943 399 GADAVML 405 (453)
Q Consensus 399 G~D~vmL 405 (453)
|+|++++
T Consensus 181 GAd~i~~ 187 (255)
T 2qiw_A 181 GARSVYP 187 (255)
T ss_dssp TCSEEEE
T ss_pred CCcEEEE
Confidence 9999999
No 453
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=23.71 E-value=3.8e+02 Score=25.10 Aligned_cols=72 Identities=24% Similarity=0.147 Sum_probs=53.1
Q ss_pred HHHcCCCEEEEechhhhhccC----CCCchHH----HHHHHHHHHhCccEEEecCcccCCCCHHHHHHHHHHHHHHHhcC
Q 012943 361 CRSMQKPVIVATNMLESMIDH----PTPTRAE----VSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRTESS 432 (453)
Q Consensus 361 c~~aGkpvi~aTqmLeSM~~~----~~PtrAE----v~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~aE~~ 432 (453)
|+....|+.+ |+.. ..=+..| ..|+..+...|+|++++..=|+-|.--.++.+.|-..+.
T Consensus 50 ~~~~~ipV~v-------MIRPR~GdF~Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~dg~iD~~~~~~Li~~a~----- 117 (224)
T 2bdq_A 50 LHEKGISVAV-------MIRPRGGNFVYNDLELRIMEEDILRAVELESDALVLGILTSNNHIDTEAIEQLLPATQ----- 117 (224)
T ss_dssp HHHTTCEEEE-------ECCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTSSBCHHHHHHHHHHHT-----
T ss_pred hhhcCCceEE-------EECCCCCCCcCCHHHHHHHHHHHHHHHHcCCCEEEEeeECCCCCcCHHHHHHHHHHhC-----
Confidence 7788999987 4432 1234445 678999999999999999999999988888777766554
Q ss_pred CCCCCCccchhhhhcc
Q 012943 433 LPVSITPPTQFSAHKV 448 (453)
Q Consensus 433 ~~~~~~~~~~~~~~~~ 448 (453)
....+..++|+.
T Consensus 118 ----~~~vTFHRAFD~ 129 (224)
T 2bdq_A 118 ----GLPLVFHMAFDV 129 (224)
T ss_dssp ----TCCEEECGGGGG
T ss_pred ----CCeEEEECchhc
Confidence 244666666643
No 454
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=23.58 E-value=1.3e+02 Score=28.87 Aligned_cols=50 Identities=10% Similarity=0.169 Sum_probs=35.9
Q ss_pred EEEecCC-CCCCHHHHHHHHHhCC--------------------cEEEeecCCCChHHHHHHHHHHHHHHhh
Q 012943 103 IVCTIGP-STSSREMIWKLAEEGM--------------------NVARLNMSHGDHASHQKTIDLVKEYNSQ 153 (453)
Q Consensus 103 Ii~TiGP-ss~s~e~i~~Li~aGm--------------------nvaRiNfSHg~~e~~~~~I~~iR~a~~~ 153 (453)
+.+.+.. ..+..+..+.|.+.|+ +.+||+|++ +.++..+.++.++++.++
T Consensus 342 ~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~-~~~~i~~~~~~l~~~l~~ 412 (417)
T 3g7q_A 342 LWLWFKDLPITTELLYQRLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVP-EPDKIEAGVKILAEEIER 412 (417)
T ss_dssp EEEECTTCSSCHHHHHHHHHHTTEECEEGGGGCTTBSSCCGGGGGEEEEESCS-CHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCCCCCHHHHHHHHHHCCEEEECchhhCCCCccccccCCCeEEEEecC-CHHHHHHHHHHHHHHHHH
Confidence 4455533 2345566777877775 367999998 999999999999887654
No 455
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=23.56 E-value=3.2e+02 Score=25.71 Aligned_cols=87 Identities=10% Similarity=0.118 Sum_probs=53.4
Q ss_pred HHHHHHhcCC-CceEEEEecChhhhccHHHHHhh-cCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechh
Q 012943 298 LKDYLKSCNA-DIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNML 375 (453)
Q Consensus 298 v~~~L~~~~~-~i~IIakIET~~gv~NldeI~~~-sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmL 375 (453)
+++.|.. |. .+.+++.+.+++.++. .... .|.+++...|--. ....++. .+.++...|+++++=+
T Consensus 9 ~k~~l~~-g~~~~g~~~~~~~p~~~e~---a~~~GaD~v~lDlE~~~~-----~~~~~~~-~~~a~~~~~~~~~VRv--- 75 (267)
T 2vws_A 9 FKERLRK-GEVQIGLWLSSTTAYMAEI---AATSGYDWLLIDGEHAPN-----TIQDLYH-QLQAVAPYASQPVIRP--- 75 (267)
T ss_dssp HHHHHHT-TCCEEEEEECSCCHHHHHH---HHTTCCSEEEEETTTSCC-----CHHHHHH-HHHHHTTSSSEEEEEC---
T ss_pred HHHHHHC-CCCEEEEEEeCCCHHHHHH---HHhCCCCEEEEcCCCCCC-----CHHHHHH-HHHHHHhCCCcEEEEe---
Confidence 5666654 43 4677888876655432 2223 7999998877432 2233333 3344555788888732
Q ss_pred hhhccCCCCchHHHHHHHHHHHhCccEEEec
Q 012943 376 ESMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (453)
Q Consensus 376 eSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (453)
+..+ -.++..++..|+|+||+.
T Consensus 76 ------~~~~---~~~i~~~l~~g~~~I~~P 97 (267)
T 2vws_A 76 ------VEGS---KPLIKQVLDIGAQTLLIP 97 (267)
T ss_dssp ------SSCC---HHHHHHHHHTTCCEEEEC
T ss_pred ------CCCC---HHHHHHHHHhCCCEEEeC
Confidence 2222 356667778899999996
No 456
>2kct_A Cytochrome C-type biogenesis protein CCME; solution structure, heme chaperone, cytochrome C biogenesis, OB-fold domain, NESG, PSI-2; NMR {Desulfovibrio vulgaris str}
Probab=23.43 E-value=1.8e+02 Score=23.66 Aligned_cols=55 Identities=20% Similarity=0.205 Sum_probs=37.5
Q ss_pred CCCeeeecCC--CCceeec-CCCEEEEEeecCCCCccEEEecccccc-cccccCCEEEE
Q 012943 166 KGPEVRSGDV--PQPIILK-EGQEFNFTIKRGVSTEDTVSVNYDDFV-NDVEVGDILLV 220 (453)
Q Consensus 166 kGPkIRtG~l--~~~i~L~-~G~~v~lt~~~~~~~~~~I~v~~~~l~-~~vk~Gd~IlI 220 (453)
.|..+|+|-+ ++.+.-. .|..++|...........++|.|..++ +..+.|.-|.+
T Consensus 7 ~~~~iRvgG~V~~GSv~r~~~~~~v~F~vtD~~~~~~~v~V~Y~GilPDlFrEGqgVV~ 65 (94)
T 2kct_A 7 KLHTVRLFGTVAADGLTMLDGAPGVRFRLEDKDNTSKTVWVLYKGAVPDTFKPGVEVII 65 (94)
T ss_dssp TTCCEEEEEEECSTTCEECTTSSEEEEEEECSSCTTCEEEEEEESCCCTTCCTTCEEEE
T ss_pred CCCeEEEeeEEeCCeEEecCCCCEEEEEEEcCCCCCcEEEEEECCCCCccccCCCeEEE
Confidence 5778998854 3344443 477888887644334578999997654 55688888766
No 457
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=23.31 E-value=1.2e+02 Score=28.99 Aligned_cols=117 Identities=15% Similarity=0.179 Sum_probs=56.2
Q ss_pred hHHHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhc-cHHHHHhh---------cCEEEEeC
Q 012943 269 DWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIP-NLHSIISA---------SDGAMVAR 338 (453)
Q Consensus 269 D~~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~-NldeI~~~---------sDgImIgR 338 (453)
|...++++.+. +|++.++- ++..+..-++ .+.+ .+.+|+.| .|.. +++|+..+ .+.+++=|
T Consensus 96 d~~~~~~l~~~-vd~~kIga-~~~~n~~ll~-~~a~--~~kPV~lk----~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~R 166 (262)
T 1zco_A 96 DTRHVELVAKY-SDILQIGA-RNSQNFELLK-EVGK--VENPVLLK----RGMGNTIQELLYSAEYIMAQGNENVILCER 166 (262)
T ss_dssp CGGGHHHHHHH-CSEEEECG-GGTTCHHHHH-HHTT--SSSCEEEE----CCTTCCHHHHHHHHHHHHTTTCCCEEEEEC
T ss_pred CHHhHHHHHhh-CCEEEECc-ccccCHHHHH-HHHh--cCCcEEEe----cCCCCCHHHHHHHHHHHHHCCCCeEEEEEC
Confidence 44556666666 77776652 2222222222 2222 34455554 3444 55555544 26888888
Q ss_pred CCccc-cCCCCCHH-HHHHHHHHHHHHcCCCE-EEEechhhhhccCCCCchHHHHH-HHHHHHhCccEEEe
Q 012943 339 GDLGA-ELPIEDVP-LLQEDIIRRCRSMQKPV-IVATNMLESMIDHPTPTRAEVSD-IAIAVREGADAVML 405 (453)
Q Consensus 339 GDLg~-elg~e~v~-~aqk~Ii~~c~~aGkpv-i~aTqmLeSM~~~~~PtrAEv~D-v~nav~~G~D~vmL 405 (453)
|=-+. ..+.+.+. .+... ..+..|.|| +.+|+ ....+.=+.. ...++..|+|++|+
T Consensus 167 G~~~~~~y~~~~v~L~ai~~---lk~~~~~pVi~d~sH--------~~g~~~~v~~~~~aAva~Ga~Gl~i 226 (262)
T 1zco_A 167 GIRTFETATRFTLDISAVPV---VKELSHLPIIVDPSH--------PAGRRSLVIPLAKAAYAIGADGIMV 226 (262)
T ss_dssp CBCCSCCSSSSBCCTTHHHH---HHHHBSSCEEECSST--------TTCSGGGHHHHHHHHHHTTCSEEEE
T ss_pred CCCCCCCcChhhcCHHHHHH---HHhhhCCCEEEEcCC--------CCCccchHHHHHHHHHHcCCCEEEE
Confidence 73221 23333322 11111 223458998 44432 1112221212 12378899999997
No 458
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=23.19 E-value=5.5e+02 Score=25.36 Aligned_cols=26 Identities=12% Similarity=0.093 Sum_probs=19.0
Q ss_pred CCCHhhHHHH--------HhhhhcCCcEEEeccc
Q 012943 264 SITDKDWEDI--------KFGVDNQVDFYAVSFV 289 (453)
Q Consensus 264 ~ltekD~~DI--------~~a~~~gvd~I~lSfV 289 (453)
.||..|++.+ +.+.+.|+|+|=+...
T Consensus 142 ~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~a 175 (362)
T 4ab4_A 142 ALETEEINDIVEAYRSGAENAKAAGFDGVEIHGA 175 (362)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCc
Confidence 5788888777 2346789999977543
No 459
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=23.15 E-value=1.3e+02 Score=29.21 Aligned_cols=62 Identities=15% Similarity=0.185 Sum_probs=50.1
Q ss_pred hhHHHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHh
Q 012943 268 KDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIIS 329 (453)
Q Consensus 268 kD~~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~ 329 (453)
.|.+.|+.=++.|+|++.--++-+++.+..+.+.+.+.|-+++|++=|==.....++.-+.+
T Consensus 161 ~d~~~Lk~Kv~aGAdf~iTQ~ffD~~~~~~f~~~~r~~Gi~vPIi~GImPi~s~~~~~~~~~ 222 (310)
T 3apt_A 161 ADLRHFKAKVEAGLDFAITQLFFNNAHYFGFLERARRAGIGIPILPGIMPVTSYRQLRRFTE 222 (310)
T ss_dssp HHHHHHHHHHHHHCSEEEECCCSCHHHHHHHHHHHHHTTCCSCEECEECCCCCTTHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEecccCCHHHHHHHHHHHHHcCCCCeEEEEecccCCHHHHHHHHH
Confidence 56777777789999999999999999999999999888878899987765555566665543
No 460
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=23.09 E-value=1.4e+02 Score=29.35 Aligned_cols=61 Identities=15% Similarity=0.190 Sum_probs=37.7
Q ss_pred CcEEEEecCCCC--CCHHHHHHHHHhCCcEEEeecCCCChHHHHHHHHHHHHHHhhcCCCcEEEEeec
Q 012943 100 KTKIVCTIGPST--SSREMIWKLAEEGMNVARLNMSHGDHASHQKTIDLVKEYNSQFEDKAVAIMLDT 165 (453)
Q Consensus 100 ~TKIi~TiGPss--~s~e~i~~Li~aGmnvaRiNfSHg~~e~~~~~I~~iR~a~~~~~~~~iaIllDL 165 (453)
+.....|+|-.+ .-.+..+++.++|-+.+.|++.| +.+.- ++.++.+.+..+ ..+.|++|.
T Consensus 134 ~v~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~-~~~~~---~e~v~avr~a~g-~d~~l~vDa 196 (379)
T 2rdx_A 134 GAPMYRVAPQRSEAETRAELARHRAAGYRQFQIKVGA-DWQSD---IDRIRACLPLLE-PGEKAMADA 196 (379)
T ss_dssp SEEBCEECCCSCSHHHHHHHHHHHHTTCCEEEEECCS-CHHHH---HHHHHHHGGGSC-TTCEEEEEC
T ss_pred ceeEEEEecCCCHHHHHHHHHHHHHcCCCEEEEeccC-CHHHH---HHHHHHHHHhcC-CCCEEEEEC
Confidence 455567776321 11234566889999999999998 44444 444444444555 456677774
No 461
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=23.07 E-value=3.3e+02 Score=25.28 Aligned_cols=88 Identities=15% Similarity=0.145 Sum_probs=51.9
Q ss_pred HHHHHHhcCCCceEEEEecChhhhccHHHHHhh-cCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhh
Q 012943 298 LKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLE 376 (453)
Q Consensus 298 v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~-sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLe 376 (453)
+++.|.+....+..++.+.+++-+ +..... .|.+++...|- + .+-..++..+. ++...|+++++=
T Consensus 10 ~k~~l~~g~~~~~~~l~v~~p~~~---e~a~~~gaD~v~lDlEd~----p-~~~~~a~~~~~-~~~~~~~~~~VR----- 75 (256)
T 1dxe_A 10 FKAALAAKQVQIGCWSALSNPIST---EVLGLAGFDWLVLDGEHA----P-NDISTFIPQLM-ALKGSASAPVVR----- 75 (256)
T ss_dssp HHHHHHTTCCEEEEEECSCSHHHH---HHHTTSCCSEEEEESSSS----S-CCHHHHHHHHH-HTTTCSSEEEEE-----
T ss_pred HHHHHHCCCCeEEEEEeCCCHHHH---HHHHhCCCCEEEEcCCCC----C-CCHHHHHHHHH-HHHhCCCcEEEE-----
Confidence 566665433346777777655443 222222 79999988874 3 33444444433 334567888873
Q ss_pred hhccCCCCchHHHHHHHHHHHhCccEEEec
Q 012943 377 SMIDHPTPTRAEVSDIAIAVREGADAVMLS 406 (453)
Q Consensus 377 SM~~~~~PtrAEv~Dv~nav~~G~D~vmLs 406 (453)
-+.++... +..++..|+|+||+.
T Consensus 76 ----v~~~~~~~---i~~~l~~g~~gI~~P 98 (256)
T 1dxe_A 76 ----VPTNEPVI---IKRLLDIGFYNFLIP 98 (256)
T ss_dssp ----CSSSCHHH---HHHHHHTTCCEEEES
T ss_pred ----CCCCCHHH---HHHHHhcCCceeeec
Confidence 22333333 556677899999995
No 462
>1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A*
Probab=22.99 E-value=1.5e+02 Score=29.67 Aligned_cols=20 Identities=20% Similarity=0.141 Sum_probs=16.5
Q ss_pred HHHHHHHHHhCCcEEEeecC
Q 012943 114 REMIWKLAEEGMNVARLNMS 133 (453)
Q Consensus 114 ~e~i~~Li~aGmnvaRiNfS 133 (453)
.+.|+.|-+.|+|++|+-++
T Consensus 65 ~~dl~~~k~~G~N~vR~~~~ 84 (440)
T 1uuq_A 65 AKELDNLKAIGVNNLRVLAV 84 (440)
T ss_dssp HHHHHHHHHTTCCEEEEECC
T ss_pred HHHHHHHHHcCCCEEEECcc
Confidence 45678889999999999854
No 463
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=22.93 E-value=1.2e+02 Score=37.29 Aligned_cols=122 Identities=14% Similarity=0.073 Sum_probs=74.5
Q ss_pred hhHHHHHhhhhcCCcE--EEeccccCHHHHHHHHHHHHhcCCCceEEE-EecChhhhccHHHHHhh-cCEE---EEeCCC
Q 012943 268 KDWEDIKFGVDNQVDF--YAVSFVKDAKVVHELKDYLKSCNADIHVIV-KIESADSIPNLHSIISA-SDGA---MVARGD 340 (453)
Q Consensus 268 kD~~DI~~a~~~gvd~--I~lSfV~sa~dv~~v~~~L~~~~~~i~IIa-kIET~~gv~NldeI~~~-sDgI---mIgRGD 340 (453)
++.+-++.+++.|+.. |..+.-.- .+....+++... .+++|. +-=+..+++....+.++ +|.+ .+--++
T Consensus 661 ~~~~~~~~~~~~gv~i~~v~~~ag~p--~~~~~~~~i~~l--G~~vi~~~~~~~~a~~~~~~~~~~g~d~~ii~~~~G~e 736 (2051)
T 2uv8_G 661 WGIPLIKELRSKGYPIQFLTIGAGVP--SLEVASEYIETL--GLKYLGLKPGSIDAISQVINIAKAHPNFPIALQWTGGR 736 (2051)
T ss_dssp HHHHHHHHHHHTTCSEEEEEEESSCC--CHHHHHHHHHHS--CCSCEEECCCSHHHHHHHHHHHHHSTTSCEEEEECCSS
T ss_pred hhHHHHHHHHHcCCCcceEEecCCCC--chhhHHHHHHHc--CCEEEEecCchHHHHHHHHHHHHhCCCceeEEEEEccC
Confidence 3446667788889887 76665421 122344566665 566666 55677888887888776 7873 444455
Q ss_pred ccccCCCCCHHHHHHHHHHHHH-HcCCCEEEEechhhhhccCCCCchHHHHHHHHHH-----------HhCccEEEe
Q 012943 341 LGAELPIEDVPLLQEDIIRRCR-SMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAV-----------REGADAVML 405 (453)
Q Consensus 341 Lg~elg~e~v~~aqk~Ii~~c~-~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav-----------~~G~D~vmL 405 (453)
=|-+.|.+++...--.++...+ +..+|+|.| .+.-+ ..+++-++ ..|+|+|.+
T Consensus 737 aGGH~g~~d~~~~~l~l~~~v~~~~~ipviaa---------GGi~d---g~~~~aaL~g~w~~~~g~~~lgadGv~~ 801 (2051)
T 2uv8_G 737 GGGHHSFEDAHTPMLQMYSKIRRHPNIMLIFG---------SGFGS---ADDTYPYLTGEWSTKFDYPPMPFDGFLF 801 (2051)
T ss_dssp CSEECCSCCSSHHHHHHHHHHTTCTTBCCEEE---------SSCCS---HHHHTHHHHTCGGGTTTCCCCCCSCEEC
T ss_pred cCCCCCcccccccHHHHHHHHHhcCCceEEEe---------CCCCC---HHHHHHHHccccccccCccCCCCceeee
Confidence 5666666543333322333333 357999987 34444 44566666 799999976
No 464
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=22.91 E-value=1.2e+02 Score=29.52 Aligned_cols=63 Identities=8% Similarity=-0.009 Sum_probs=45.0
Q ss_pred hhHHHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecC-hhhhccHHHHHhh-cCEEEE
Q 012943 268 KDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIES-ADSIPNLHSIISA-SDGAMV 336 (453)
Q Consensus 268 kD~~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET-~~gv~NldeI~~~-sDgImI 336 (453)
+-+++.+...+.|+|.|.+.-+.+.+++.++.+.+ +++++ .+|. ....-+.+|+.+. ..-+.+
T Consensus 169 ~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~-----~~P~i-i~~~g~~~~~~~~eL~~lGv~~v~~ 233 (287)
T 3b8i_A 169 AVIQRTLAYQEAGADGICLVGVRDFAHLEAIAEHL-----HIPLM-LVTYGNPQLRDDARLARLGVRVVVN 233 (287)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCSHHHHHHHHTTC-----CSCEE-EECTTCGGGCCHHHHHHTTEEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEecCCCCHHHHHHHHHhC-----CCCEE-EeCCCCCCCCCHHHHHHcCCcEEEE
Confidence 34566666678999999999888888887766544 46777 7785 4567788888766 444444
No 465
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3
Probab=22.79 E-value=1.1e+02 Score=29.27 Aligned_cols=23 Identities=22% Similarity=0.218 Sum_probs=19.8
Q ss_pred CCCHHHHHHHHHhCCcEEEeecC
Q 012943 111 TSSREMIWKLAEEGMNVARLNMS 133 (453)
Q Consensus 111 s~s~e~i~~Li~aGmnvaRiNfS 133 (453)
....+.++.|-+.|+|++||-++
T Consensus 36 ~~~~~d~~~i~~~G~n~vRi~i~ 58 (341)
T 1vjz_A 36 NFKEEDFLWMAQWDFNFVRIPMC 58 (341)
T ss_dssp CCCHHHHHHHHHTTCCEEEEEEE
T ss_pred CCCHHHHHHHHHcCCCEEEeeCC
Confidence 35688999999999999999764
No 466
>1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3
Probab=22.73 E-value=1.7e+02 Score=28.15 Aligned_cols=50 Identities=20% Similarity=0.293 Sum_probs=30.1
Q ss_pred HHHHHHHHHhCCcEEEee-cCCCC----------h-HHHHHHHHHHHHHHhhcCCCcEEEEeecC
Q 012943 114 REMIWKLAEEGMNVARLN-MSHGD----------H-ASHQKTIDLVKEYNSQFEDKAVAIMLDTK 166 (453)
Q Consensus 114 ~e~i~~Li~aGmnvaRiN-fSHg~----------~-e~~~~~I~~iR~a~~~~~~~~iaIllDLk 166 (453)
.+.|+.|-+.|+|++|+- |+++. . +...+.++.+=+..++.| +.+++||-
T Consensus 45 ~~dl~~~k~~G~N~vR~~~~~~~~w~~~~~~~g~~~~~~~~~ld~~i~~a~~~G---i~vil~l~ 106 (373)
T 1rh9_A 45 TNTFQQASKYKMNVARTWAFSHGGSRPLQSAPGVYNEQMFQGLDFVISEAKKYG---IHLIMSLV 106 (373)
T ss_dssp HHHHHHHHHTTCCEEEEESSCSSSSSCSEEETTEECHHHHHHHHHHHHHHHHTT---CEEEEECC
T ss_pred HHHHHHHHHCCCCEEEECeecCCCCccccCCCCccCHHHHHHHHHHHHHHHHCC---CEEEEEec
Confidence 456888899999999986 44431 1 122333343334445555 67777764
No 467
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=22.72 E-value=1.2e+02 Score=29.61 Aligned_cols=61 Identities=18% Similarity=0.223 Sum_probs=46.4
Q ss_pred HhhHHHHHhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHH
Q 012943 267 DKDWEDIKFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSI 327 (453)
Q Consensus 267 ekD~~DI~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI 327 (453)
+.|.+.|+.=++.|+|++.--++-+++.+..+.+.+.+.|-+++|++=|==.....++.-+
T Consensus 163 ~~d~~~Lk~KvdAGAdf~iTQ~ffD~~~~~~f~~~~r~~Gi~vPIi~GImPi~s~~~~~~~ 223 (304)
T 3fst_A 163 QADLLNLKRKVDAGANRAITQFFFDVESYLRFRDRCVSAGIDVEIIPGILPVSNFKQAKKL 223 (304)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCCSCHHHHHHHHHHHHHTTCCSCEECEECCCSCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEeCccCCHHHHHHHHHHHHhcCCCCcEEEEecccCCHHHHHHH
Confidence 3567777777899999999999999999999999898888778888765433344444433
No 468
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=22.57 E-value=1.3e+02 Score=27.58 Aligned_cols=50 Identities=18% Similarity=0.325 Sum_probs=38.3
Q ss_pred HHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEEEecCcccCCCCHHHHHHHHHH
Q 012943 355 EDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAVMLSGETAHGKFPLKAVKVMHT 424 (453)
Q Consensus 355 k~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~ 424 (453)
...+..++++|++|.+-|- . +..+...++..|+|+|+- .||..+.+++.+
T Consensus 186 ~~~v~~~~~~G~~v~~WTV--------n-----~~~~~~~l~~~GVdgIiT-------D~P~~~~~~l~~ 235 (238)
T 3no3_A 186 PDWVKDCKVLGMTSNVWTV--------D-----DPKLMEEMIDMGVDFITT-------DLPEETQKILHS 235 (238)
T ss_dssp TTHHHHHHHTTCEEEEECC--------C-----SHHHHHHHHHHTCSEEEE-------SCHHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEECC--------C-----CHHHHHHHHHcCCCEEEC-------CCHHHHHHHHHh
Confidence 5788999999999988751 1 234566788899999986 589888877654
No 469
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=22.51 E-value=7.3e+02 Score=26.52 Aligned_cols=132 Identities=16% Similarity=0.134 Sum_probs=65.1
Q ss_pred CCCHhhHHHH--------HhhhhcCCcEEEecccc-------------CHH------------HHHHHHHHHH-hcCCCc
Q 012943 264 SITDKDWEDI--------KFGVDNQVDFYAVSFVK-------------DAK------------VVHELKDYLK-SCNADI 309 (453)
Q Consensus 264 ~ltekD~~DI--------~~a~~~gvd~I~lSfV~-------------sa~------------dv~~v~~~L~-~~~~~i 309 (453)
.||..|++.+ +.+.+.|+|+|=+.... ... -+.++-+.+. ..+.+.
T Consensus 138 ~~t~~eI~~~i~~f~~aA~~a~~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~ 217 (729)
T 1o94_A 138 EMDLSDIAQVQQFYVDAAKRSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDC 217 (729)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHhCCCc
Confidence 5788887666 23356899998773322 111 1223222232 246678
Q ss_pred eEEEEecC-----hhhh---ccHHHHHhh----cCEEEEeCCCc---cc-cCCCCCHH-HHHHHHHHHHH-HcCCCEEEE
Q 012943 310 HVIVKIES-----ADSI---PNLHSIISA----SDGAMVARGDL---GA-ELPIEDVP-LLQEDIIRRCR-SMQKPVIVA 371 (453)
Q Consensus 310 ~IIakIET-----~~gv---~NldeI~~~----sDgImIgRGDL---g~-elg~e~v~-~aqk~Ii~~c~-~aGkpvi~a 371 (453)
.|..||-- ..|+ ++..++++. +|.+-+..|-+ .. ..+....+ ..+...++..+ ..++|+|..
T Consensus 218 pv~vrls~~~~~~~~G~~~~~~~~~~~~~l~~~~d~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~~ 297 (729)
T 1o94_A 218 AIATRFGVDTVYGPGQIEAEVDGQKFVEMADSLVDMWDITIGDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVSKKPVLGV 297 (729)
T ss_dssp EEEEEEEEECSSCTTSCCTTTHHHHHHHHHGGGCSEEEEEECCSTTGGGTSCCTTTCCTTTTHHHHHHHHTTCSSCEECC
T ss_pred eEEEEEccccCcCCCCCCchHHHHHHHHHHHhhcCEEEEeeecccccccccCCccccCccccHHHHHHHHHHCCCEEEEe
Confidence 89999821 1122 233333332 57776655532 11 01100000 00122333333 357888863
Q ss_pred echhhhhccCCCCchHHHHHHHHHHHhC-ccEEEecC
Q 012943 372 TNMLESMIDHPTPTRAEVSDIAIAVREG-ADAVMLSG 407 (453)
Q Consensus 372 TqmLeSM~~~~~PtrAEv~Dv~nav~~G-~D~vmLs~ 407 (453)
...-+. .+.-.++..| +|.|++..
T Consensus 298 ---------G~i~~~---~~a~~~l~~g~aD~V~~gR 322 (729)
T 1o94_A 298 ---------GRYTDP---EKMIEIVTKGYADIIGCAR 322 (729)
T ss_dssp ---------SCCCCH---HHHHHHHHTTSCSBEEESH
T ss_pred ---------CCCCCH---HHHHHHHHCCCCCEEEeCc
Confidence 233333 2344778887 99999864
No 470
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=22.39 E-value=3.9e+02 Score=23.30 Aligned_cols=129 Identities=18% Similarity=0.159 Sum_probs=65.7
Q ss_pred HHHHhhhhcCCcEEEecc----ccCHHHHHHHHHHHHhcCCCceEE--EEecC-hhhhccHHHHHhh-cCEEEEeCCCcc
Q 012943 271 EDIKFGVDNQVDFYAVSF----VKDAKVVHELKDYLKSCNADIHVI--VKIES-ADSIPNLHSIISA-SDGAMVARGDLG 342 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lSf----V~sa~dv~~v~~~L~~~~~~i~II--akIET-~~gv~NldeI~~~-sDgImIgRGDLg 342 (453)
+.++...+ |+|+|=+.+ ...++.++.+++. -.+..++ .|+.+ ++- -++..+++ +|++.+-.+
T Consensus 17 ~~~~~~~~-~v~~iev~~~~~~~~g~~~i~~l~~~----~~~~~i~~~l~~~di~~~--~~~~a~~~Gad~v~vh~~--- 86 (207)
T 3ajx_A 17 ELAGKVAE-YVDIIELGTPLIKAEGLSVITAVKKA----HPDKIVFADMKTMDAGEL--EADIAFKAGADLVTVLGS--- 86 (207)
T ss_dssp HHHHHHGG-GCSEEEECHHHHHHHCTHHHHHHHHH----STTSEEEEEEEECSCHHH--HHHHHHHTTCSEEEEETT---
T ss_pred HHHHHhhc-cCCEEEECcHHHHhhCHHHHHHHHHh----CCCCeEEEEEEecCccHH--HHHHHHhCCCCEEEEecc---
Confidence 33444334 788765533 1223334444432 2234555 48876 322 13444444 799887321
Q ss_pred ccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHhCccEE-EecCccc--CCCCHHHHH
Q 012943 343 AELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVREGADAV-MLSGETA--HGKFPLKAV 419 (453)
Q Consensus 343 ~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~G~D~v-mLs~ETA--~G~yP~eaV 419 (453)
.. ....+.+++.|+++|++++++ |. ++ -+..| .+..+...|+|.+ +..+-++ .|..|.+
T Consensus 87 ----~~--~~~~~~~~~~~~~~g~~~gv~------~~-s~-~~p~~--~~~~~~~~g~d~v~~~~~~~~~~~g~~~~~-- 148 (207)
T 3ajx_A 87 ----AD--DSTIAGAVKAAQAHNKGVVVD------LI-GI-EDKAT--RAQEVRALGAKFVEMHAGLDEQAKPGFDLN-- 148 (207)
T ss_dssp ----SC--HHHHHHHHHHHHHHTCEEEEE------CT-TC-SSHHH--HHHHHHHTTCSEEEEECCHHHHTSTTCCTH--
T ss_pred ----CC--hHHHHHHHHHHHHcCCceEEE------Ee-cC-CChHH--HHHHHHHhCCCEEEEEecccccccCCCchH--
Confidence 11 123446778888889997663 11 11 12223 1112234589999 6555543 5655665
Q ss_pred HHHHHHHH
Q 012943 420 KVMHTVAL 427 (453)
Q Consensus 420 ~~m~~I~~ 427 (453)
+.++.++.
T Consensus 149 ~~i~~~~~ 156 (207)
T 3ajx_A 149 GLLAAGEK 156 (207)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhhC
Confidence 55665554
No 471
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina}
Probab=22.05 E-value=40 Score=33.30 Aligned_cols=53 Identities=15% Similarity=0.149 Sum_probs=31.6
Q ss_pred CHHHHHHHHHhCCcEEEeecCCCC---------h-HHHHHHHHHHHHHHhhcCCCcEEEEeecCCC
Q 012943 113 SREMIWKLAEEGMNVARLNMSHGD---------H-ASHQKTIDLVKEYNSQFEDKAVAIMLDTKGP 168 (453)
Q Consensus 113 s~e~i~~Li~aGmnvaRiNfSHg~---------~-e~~~~~I~~iR~a~~~~~~~~iaIllDLkGP 168 (453)
+.+++..|-+.|+|++||-++... . +...+.++.+=+...+. -+.+++|+-.-
T Consensus 45 t~~m~~~i~~~G~N~vRipi~w~~~~~~~~~g~~~~~~l~~ld~vV~~a~~~---Gi~vIlDlH~~ 107 (340)
T 3qr3_A 45 IGQMQHFVNEDGMTIFRLPVGWQYLVNNNLGGNLDSTSISKYDQLVQGCLSL---GAYCIVDIHNY 107 (340)
T ss_dssp HHHHHHHHHHHCCCEEEEEECHHHHTTTCTTCCCCHHHHHHHHHHHHHHHHT---TCEEEEEECST
T ss_pred HHHHHHHHHHCCCCEEEEEeeHHHhCCCCCCCccCHHHHHHHHHHHHHHHHC---CCEEEEEecCC
Confidence 467777778899999999987421 0 12222233222333333 47788888654
No 472
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=22.00 E-value=4.6e+02 Score=24.71 Aligned_cols=114 Identities=15% Similarity=0.148 Sum_probs=0.0
Q ss_pred CHhhHHHHHhhhhcCCcEEEec-----cccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh-cCEEEEeCC
Q 012943 266 TDKDWEDIKFGVDNQVDFYAVS-----FVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA-SDGAMVARG 339 (453)
Q Consensus 266 tekD~~DI~~a~~~gvd~I~lS-----fV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~-sDgImIgRG 339 (453)
.+.|...+..+.+.++.+|.+= |-.+.+|+..+++.. +++|+.|==-....+ +.|.... +|+|.+=-.
T Consensus 59 ~~~~~~~iA~~y~~~A~~IsVlTd~~~F~gs~~dL~~ir~~v-----~lPvLrKDfi~~~~q-i~ea~~~GAD~ilLi~a 132 (251)
T 1i4n_A 59 ADASLEDFIRMYDELADAISILTEKHYFKGDPAFVRAARNLT-----CRPILAKDFYIDTVQ-VKLASSVGADAILIIAR 132 (251)
T ss_dssp TTCCHHHHHHHHHHHCSEEEEECCCSSSCCCTHHHHHHHTTC-----CSCEEEECCCCSTHH-HHHHHHTTCSEEEEEGG
T ss_pred CCCCHHHHHHHHHHhCCceEEEecccccCCCHHHHHHHHHhC-----CCCEEEeeCCCCHHH-HHHHHHcCCCEEEEecc
Q ss_pred CccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHh-CccEEEecC
Q 012943 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVRE-GADAVMLSG 407 (453)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~-G~D~vmLs~ 407 (453)
-|.- .-.+.++..|++.|..+++-+. ...++..+... |+|.+-.+.
T Consensus 133 ~l~~--------~~l~~l~~~a~~lGl~~lvEv~--------------~~eE~~~A~~l~g~~iIGinn 179 (251)
T 1i4n_A 133 ILTA--------EQIKEIYEAAEELGMDSLVEVH--------------SREDLEKVFSVIRPKIIGINT 179 (251)
T ss_dssp GSCH--------HHHHHHHHHHHTTTCEEEEEEC--------------SHHHHHHHHTTCCCSEEEEEC
T ss_pred cCCH--------HHHHHHHHHHHHcCCeEEEEeC--------------CHHHHHHHHhcCCCCEEEEeC
No 473
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=21.98 E-value=4.5e+02 Score=23.85 Aligned_cols=140 Identities=11% Similarity=0.147 Sum_probs=79.5
Q ss_pred HHHhhhhcCCcEEEecccc----CHHHHHHHHHHHHhcCCCceEEEE------ec------------C----hhhhccHH
Q 012943 272 DIKFGVDNQVDFYAVSFVK----DAKVVHELKDYLKSCNADIHVIVK------IE------------S----ADSIPNLH 325 (453)
Q Consensus 272 DI~~a~~~gvd~I~lSfV~----sa~dv~~v~~~L~~~~~~i~IIak------IE------------T----~~gv~Nld 325 (453)
.|+.+.+.|.|+|-+.... +.+++.++++.+++.|-.+..+.- .- . .++++.+.
T Consensus 26 ~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 105 (290)
T 3tva_A 26 HLEVAQDLKVPTVQVHAPHPHTRTREHAQAFRAKCDAAGIQVTVIFGGFDGESYADIPTTARTVGLVPLETRASRVAEMK 105 (290)
T ss_dssp CHHHHHHTTCSEEEEECCCGGGCSHHHHHHHHHHHHHTTCEEEEEECCCTTCCCSSHHHHHHHSSSCSTTTHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEecCCCCCcCCHHHHHHHHHHHHHcCCEEEEEeeccCCcccccccccccccCCCCHHHHHHHHHHHH
Confidence 4566778899998887532 367788899999887755444321 00 0 13445555
Q ss_pred HHHhh-----cCEEEEeCCCcccc--CCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHHh
Q 012943 326 SIISA-----SDGAMVARGDLGAE--LPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVRE 398 (453)
Q Consensus 326 eI~~~-----sDgImIgRGDLg~e--lg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~~ 398 (453)
+.+.. ++.+.+..|...-. -.++.+....+++...|.++|..+.+= .+ ..+..++.++...+.
T Consensus 106 ~~i~~a~~lG~~~v~~~~G~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE-----~~----~~~~~~~~~l~~~~~- 175 (290)
T 3tva_A 106 EISDFASWVGCPAIGLHIGFVPESSSPDYSELVRVTQDLLTHAANHGQAVHLE-----TG----QESADHLLEFIEDVN- 175 (290)
T ss_dssp HHHHHHHHHTCSEEEECCCCCCCTTSHHHHHHHHHHHHHHHHHHTTTCEEEEE-----CC----SSCHHHHHHHHHHHC-
T ss_pred HHHHHHHHcCCCEEEEcCCCCcccchHHHHHHHHHHHHHHHHHHHcCCEEEEe-----cC----CCCHHHHHHHHHhcC-
Confidence 55443 56777755533211 011234555678888888889877662 22 234555556655553
Q ss_pred CccEEEecCccc----CC-CCHHHHHHHH
Q 012943 399 GADAVMLSGETA----HG-KFPLKAVKVM 422 (453)
Q Consensus 399 G~D~vmLs~ETA----~G-~yP~eaV~~m 422 (453)
.+.+-+.-+|. .| .-|.+.++.+
T Consensus 176 -~~~~g~~~D~~h~~~~g~~d~~~~l~~~ 203 (290)
T 3tva_A 176 -RPNLGINFDPANMILYGTGNPIEALRKV 203 (290)
T ss_dssp -CTTEEEEECHHHHHHTTCSCHHHHHHHH
T ss_pred -CCCEEEEeccHHHHHhCCCCHHHHHHHH
Confidence 33333333432 24 6677666554
No 474
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=21.98 E-value=1.9e+02 Score=28.00 Aligned_cols=59 Identities=24% Similarity=0.270 Sum_probs=41.7
Q ss_pred hhccHHHHHhh--cCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHH
Q 012943 320 SIPNLHSIISA--SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVR 397 (453)
Q Consensus 320 gv~NldeI~~~--sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~ 397 (453)
...+++++++. .|.++|+ .| ......++.+|-++||+|++ .+....+.+|...+..+..
T Consensus 56 ~~~~~~~ll~~~~vD~V~i~-------tp----~~~H~~~~~~al~aGkhVl~--------EKPla~~~~e~~~l~~~a~ 116 (359)
T 3m2t_A 56 VLDNVPAMLNQVPLDAVVMA-------GP----PQLHFEMGLLAMSKGVNVFV--------EKPPCATLEELETLIDAAR 116 (359)
T ss_dssp EESSHHHHHHHSCCSEEEEC-------SC----HHHHHHHHHHHHHTTCEEEE--------CSCSCSSHHHHHHHHHHHH
T ss_pred ccCCHHHHhcCCCCCEEEEc-------CC----cHHHHHHHHHHHHCCCeEEE--------ECCCcCCHHHHHHHHHHHH
Confidence 45688998875 5999996 22 44566777888899999987 1333567777777766554
No 475
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=21.91 E-value=1.3e+02 Score=23.61 Aligned_cols=40 Identities=18% Similarity=0.158 Sum_probs=23.5
Q ss_pred CceeecCCCEEEEEeecCCCCccEEEecccccccccccCC
Q 012943 177 QPIILKEGQEFNFTIKRGVSTEDTVSVNYDDFVNDVEVGD 216 (453)
Q Consensus 177 ~~i~L~~G~~v~lt~~~~~~~~~~I~v~~~~l~~~vk~Gd 216 (453)
..+.++.|++|+|...+.......+.++...+-..+.+|.
T Consensus 28 ~~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~~~~~~pg~ 67 (100)
T 4hci_A 28 NVITIPINESTTLLLKNKGKSEHTFTIKKLGIDVVVESGK 67 (100)
T ss_dssp SEEEECTTSCEEEEEEECSSSCEEEEEGGGTEEEEECTTC
T ss_pred CEEEECCCCEEEEEEEcCCCceEEEEEecCCcceeecCCc
Confidence 4689999999999754332223445554434444455554
No 476
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=21.85 E-value=3.8e+02 Score=24.16 Aligned_cols=144 Identities=11% Similarity=-0.036 Sum_probs=75.8
Q ss_pred HHHHhhhhcCCcEEEeccccC-H---HHHHHHHHHHHhcCCCceEEEE------ecC------hhhhccHHHHHhh----
Q 012943 271 EDIKFGVDNQVDFYAVSFVKD-A---KVVHELKDYLKSCNADIHVIVK------IES------ADSIPNLHSIISA---- 330 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lSfV~s-a---~dv~~v~~~L~~~~~~i~IIak------IET------~~gv~NldeI~~~---- 330 (453)
+.++.+.+.|.|+|-+..-.. . .++.++++.+++.|-.+..+.- +-+ .++++.+...+..
T Consensus 21 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~l 100 (290)
T 2qul_A 21 ATAKRIAGLGFDLMEISLGEFHNLSDAKKRELKAVADDLGLTVMCCIGLKSEYDFASPDKSVRDAGTEYVKRLLDDCHLL 100 (290)
T ss_dssp HHHHHHHHTTCSEEEEESTTGGGSCHHHHHHHHHHHHHHTCEEEEEEEECGGGCTTCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEecCCccccchhhHHHHHHHHHHcCCceEEecCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Confidence 456777789999998865432 2 6788899999887755444321 111 1233444444443
Q ss_pred -cCEEEEe----CCC--ccccCCC----CCHHHHHHHHHHHHHHcCCCEEEEechhhhhc---cCCCCchHHHHHHHHHH
Q 012943 331 -SDGAMVA----RGD--LGAELPI----EDVPLLQEDIIRRCRSMQKPVIVATNMLESMI---DHPTPTRAEVSDIAIAV 396 (453)
Q Consensus 331 -sDgImIg----RGD--Lg~elg~----e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~---~~~~PtrAEv~Dv~nav 396 (453)
+..+.+- .|. +.-.... +.+....+++...|.++|..+.+ |.+- .+...+..++.++...+
T Consensus 101 G~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~l-----En~~~~~~~~~~~~~~~~~l~~~~ 175 (290)
T 2qul_A 101 GAPVFAGLTFCAWPQSPPLDMKDKRPYVDRAIESVRRVIKVAEDYGIIYAL-----EVVNRFEQWLCNDAKEAIAFADAV 175 (290)
T ss_dssp TCSEEEEEEEEESSCCCCTTCCCCHHHHHHHHHHHHTTHHHHHHHTCEEEE-----ECCCTTTCSSCCSHHHHHHHHHHH
T ss_pred CCCEEEeeccccCCcccCCCcccHHHHHHHHHHHHHHHHHHHHHcCCEEEE-----EeCccccccccCCHHHHHHHHHHc
Confidence 3444431 122 1111111 23444557777888888987665 3322 22345666666666555
Q ss_pred HhCccEEEecCccc----CCCCHHHHHHH
Q 012943 397 REGADAVMLSGETA----HGKFPLKAVKV 421 (453)
Q Consensus 397 ~~G~D~vmLs~ETA----~G~yP~eaV~~ 421 (453)
. .+.+=+.-+|. .|.-|.++++.
T Consensus 176 ~--~~~~g~~~D~~h~~~~g~d~~~~l~~ 202 (290)
T 2qul_A 176 D--SPACKVQLDTFHMNIEETSFRDAILA 202 (290)
T ss_dssp C--CTTEEEEEEHHHHHHHCSCHHHHHHH
T ss_pred C--CCCEEEEEEchhhhhcCCCHHHHHHH
Confidence 2 23233333432 35566665554
No 477
>1z85_A Hypothetical protein TM1380; alpha/beta knot fold, structural genomics, joint center for structural genomics, JCSG; 2.12A {Thermotoga maritima}
Probab=21.84 E-value=2.1e+02 Score=26.80 Aligned_cols=72 Identities=18% Similarity=0.106 Sum_probs=42.0
Q ss_pred ccccCCEEEEeCC---eeEEEEEEEeCCeEEEEEeeCcEecccceeecCCCcc--CCCCCCHhhHHHHHhhhhcCCcEEE
Q 012943 211 DVEVGDILLVDGG---MMSLAVKSKTKDLVKCIVVDGGELKSRRHLNVRGKSA--NLPSITDKDWEDIKFGVDNQVDFYA 285 (453)
Q Consensus 211 ~vk~Gd~IlIDDG---~I~L~V~ev~~~~v~~~V~ngG~L~s~KgVnlp~~~~--~lp~ltekD~~DI~~a~~~gvd~I~ 285 (453)
-+++||.|.+-|| ....+|.+++++.+.+++...-........ ...+ .+|. .++-..-|+.+.+.|++-|.
T Consensus 40 Rl~~Gd~v~l~dg~G~~~~a~I~~~~~~~~~~~i~~~~~~~~e~~~---~i~L~~al~K-~~r~e~ilqkatELGV~~I~ 115 (234)
T 1z85_A 40 RLKEGDVIEATDGNGFSYTCILKSLKKKTAAAKIVKVEEKEKEPTE---KLSVVVPIGR-WERTRFLIEKCVELGVDEIF 115 (234)
T ss_dssp TCCTTCEEEEECSBSEEEEEEEEEECSSCEEEEEEEEEECCCCCSS---CEEEEEECCC-HHHHHHHHHHHHHTTCSEEE
T ss_pred cCCCCCEEEEEeCCCCEEEEEEEEecCCEEEEEEEEEeccCCCCCc---eEEEEEeccc-hHHHHHHHHHHHHhCCCEEE
Confidence 4589999998764 345677788888888777643221111111 1111 1222 13333455788999999764
Q ss_pred e
Q 012943 286 V 286 (453)
Q Consensus 286 l 286 (453)
.
T Consensus 116 p 116 (234)
T 1z85_A 116 F 116 (234)
T ss_dssp E
T ss_pred E
Confidence 3
No 478
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii}
Probab=21.78 E-value=1.1e+02 Score=29.41 Aligned_cols=46 Identities=15% Similarity=0.262 Sum_probs=34.8
Q ss_pred hhccHHHHHhhcCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEE
Q 012943 320 SIPNLHSIISASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIV 370 (453)
Q Consensus 320 gv~NldeI~~~sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~ 370 (453)
..+-.+|+.+.+|++.|..|-|. ++....+...++.+++.|+|+++
T Consensus 46 ~~~E~~e~~~~a~al~iNiGtl~-----~~~~~~m~~A~~~A~~~~~PvVL 91 (265)
T 3hpd_A 46 AEEELEEMIRLADAVVINIGTLD-----SGWRRSMVKATEIANELGKPIVL 91 (265)
T ss_dssp CTTTHHHHHHHCSEEEEECTTCC-----HHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CHHHHHHHHHHCCeEEEECCCCC-----hHHHHHHHHHHHHHHHcCCCEEE
Confidence 34567889989999999866553 23445566778899999999886
No 479
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=21.68 E-value=3.8e+02 Score=26.17 Aligned_cols=91 Identities=11% Similarity=0.055 Sum_probs=56.4
Q ss_pred CHhhHHHH-HhhhhcCCcEEEeccccCHHHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHhh--cCEEEEeCCCcc
Q 012943 266 TDKDWEDI-KFGVDNQVDFYAVSFVKDAKVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIISA--SDGAMVARGDLG 342 (453)
Q Consensus 266 tekD~~DI-~~a~~~gvd~I~lSfV~sa~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~~--sDgImIgRGDLg 342 (453)
|..+...+ +..-+.|+ +|=-|+- ++..++++ .+ ...++|+ --|+....+.+.++++. +|.+++.++-.|
T Consensus 201 ~~~~a~~~~~~l~~~~i-~iE~P~~----~~~~~~~l-~~-~~~iPI~-~de~i~~~~~~~~~i~~~~~d~v~ik~~~~G 272 (379)
T 2rdx_A 201 RVDNAIRLARATRDLDY-ILEQPCR----SYEECQQV-RR-VADQPMK-LDECVTGLHMAQRIVADRGAEICCLKISNLG 272 (379)
T ss_dssp CHHHHHHHHHHTTTSCC-EEECCSS----SHHHHHHH-HT-TCCSCEE-ECTTCCSHHHHHHHHHHTCCSEEEEETTTTT
T ss_pred CHHHHHHHHHHHHhCCe-EEeCCcC----CHHHHHHH-Hh-hCCCCEE-EeCCcCCHHHHHHHHHcCCCCEEEEeccccC
Confidence 44443233 33345688 8776764 44433332 22 1246655 45777777777887765 899999765554
Q ss_pred ccCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 012943 343 AELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (453)
Q Consensus 343 ~elg~e~v~~aqk~Ii~~c~~aGkpvi~a 371 (453)
| +. --.+++..|+++|.++.+.
T Consensus 273 ---G---it-~~~~i~~~A~~~g~~~~~~ 294 (379)
T 2rdx_A 273 ---G---LS-KARRTRDFLIDNRMPVVAE 294 (379)
T ss_dssp ---S---HH-HHHHHHHHHHHTTCCEEEE
T ss_pred ---C---HH-HHHHHHHHHHHcCCeEEEe
Confidence 2 22 3356888999999998885
No 480
>2z0t_A Putative uncharacterized protein PH0355; alpha/beta protein, RNA binding protein, structural genomics, NPPSFA; 1.80A {Pyrococcus horikoshii} PDB: 1s04_A
Probab=21.56 E-value=66 Score=26.95 Aligned_cols=30 Identities=23% Similarity=0.481 Sum_probs=20.9
Q ss_pred EecccccccccccCCEEEEeCCeeEEEEEEE
Q 012943 202 SVNYDDFVNDVEVGDILLVDGGMMSLAVKSK 232 (453)
Q Consensus 202 ~v~~~~l~~~vk~Gd~IlIDDG~I~L~V~ev 232 (453)
-+|++ =.+.+++||.|.+.+..+..+|+.+
T Consensus 25 Rlnd~-k~~~ikvGD~I~f~~~~l~~~V~~v 54 (109)
T 2z0t_A 25 RLYDE-KRRQIKPGDIIIFEGGKLKVKVKGI 54 (109)
T ss_dssp EECCT-TGGGCCTTCEEEEGGGTEEEEEEEE
T ss_pred Eecch-hhhcCCCCCEEEECCCEEEEEEEEE
Confidence 34443 3568899999999544777777765
No 481
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=21.49 E-value=3.8e+02 Score=28.95 Aligned_cols=99 Identities=16% Similarity=0.243 Sum_probs=0.0
Q ss_pred CHhhHHHHHhhhhcCCcEEEeccccCH----------------HHHHHHHHHHHhcCCCceEEEEecChhhhccHHHHHh
Q 012943 266 TDKDWEDIKFGVDNQVDFYAVSFVKDA----------------KVVHELKDYLKSCNADIHVIVKIESADSIPNLHSIIS 329 (453)
Q Consensus 266 tekD~~DI~~a~~~gvd~I~lSfV~sa----------------~dv~~v~~~L~~~~~~i~IIakIET~~gv~NldeI~~ 329 (453)
++.-++-|+||.++|.++|.+ +. .|+.++.+|-.+ +.+.|+.-.|+..=-+++++.++
T Consensus 308 ~~~~k~yIDfAa~~G~~yvlv----D~gW~~~~~~d~~~~~p~~di~~l~~Ya~~--kgV~i~lw~~~~~~~~~~~~~~~ 381 (641)
T 3a24_A 308 NPTYKAYIDFASANGIEYVIL----DEGWAVNLQADLMQVVKEIDLKELVDYAAS--KNVGIILWAGYHAFERDMENVCR 381 (641)
T ss_dssp HHHHHHHHHHHHHTTCCEEEE----CTTSBCTTSCCTTCBCTTCCHHHHHHHHHH--TTCEEEEEEEHHHHHTSHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEE----ecccccCCCCCccccCCcCCHHHHHHHHHh--cCCEEEEEeeCcchHHHHHHHHH
Q ss_pred h-----cCEEEEe---CCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCc
Q 012943 330 A-----SDGAMVA---RGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPT 385 (453)
Q Consensus 330 ~-----sDgImIg---RGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~Pt 385 (453)
. .+||-++ |+| ........++++.|.+++.-|... ....|+
T Consensus 382 ~~~~~Gv~gvK~Df~~~~~-------Q~~v~~y~~i~~~aA~~~l~V~fH--------g~~~P~ 430 (641)
T 3a24_A 382 HYAEMGVKGFKVDFMDRDD-------QEMTAFNYRAAEMCAKYKLILDLH--------GTHKPA 430 (641)
T ss_dssp HHHHHTCCEEEEECCCCCS-------HHHHHHHHHHHHHHHHTTCEEEEC--------SCCCCT
T ss_pred HHHHcCCCEEEECCCCCCc-------HHHHHHHHHHHHHHHHcCCEEEcC--------CCcCCC
No 482
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=21.20 E-value=5.2e+02 Score=24.33 Aligned_cols=95 Identities=16% Similarity=0.139 Sum_probs=54.4
Q ss_pred HHHHhhhhcCCcEEEec------cccCHHHHHHHH-HHHHhcCCCceEEEEe---cChhhhccHHHHHhh-cCEEEEeCC
Q 012943 271 EDIKFGVDNQVDFYAVS------FVKDAKVVHELK-DYLKSCNADIHVIVKI---ESADSIPNLHSIISA-SDGAMVARG 339 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~lS------fV~sa~dv~~v~-~~L~~~~~~i~IIakI---ET~~gv~NldeI~~~-sDgImIgRG 339 (453)
+.+++.++.|+|+|.+. +.-+.++-.++- ...+..+. ||+-+ -|.++++......+. +|++|+-+-
T Consensus 23 ~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g---vi~Gvg~~~t~~ai~la~~A~~~Gadavlv~~P 99 (286)
T 2r91_A 23 NHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR---VIVQVASLNADEAIALAKYAESRGAEAVASLPP 99 (286)
T ss_dssp HHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS---EEEECCCSSHHHHHHHHHHHHHTTCSEEEECCS
T ss_pred HHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC---EEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 55577788999998762 333444444443 33444333 77776 346677666655544 799999755
Q ss_pred CccccCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 012943 340 DLGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (453)
Q Consensus 340 DLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~a 371 (453)
...-...-+.+. +..-..|.+.+.|+++.
T Consensus 100 ~y~~~~s~~~l~---~~f~~va~a~~lPiilY 128 (286)
T 2r91_A 100 YYFPRLSERQIA---KYFRDLCSAVSIPVFLY 128 (286)
T ss_dssp CSSTTCCHHHHH---HHHHHHHHHCSSCEEEE
T ss_pred cCCCCCCHHHHH---HHHHHHHHhcCCCEEEE
Confidence 442201112233 33334456678998875
No 483
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=21.12 E-value=1.7e+02 Score=28.92 Aligned_cols=88 Identities=7% Similarity=-0.010 Sum_probs=54.6
Q ss_pred hhhccHHHHHhh-------cCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHH
Q 012943 319 DSIPNLHSIISA-------SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSD 391 (453)
Q Consensus 319 ~gv~NldeI~~~-------sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~D 391 (453)
....+++++++. .|.|+|+ .|. .....++.+|-++||+|++ .+-...+.+|...
T Consensus 67 ~~~~~~~~ll~~~~~~~~~vD~V~i~-------tp~----~~H~~~~~~al~aGkhVl~--------EKPla~~~~ea~~ 127 (398)
T 3dty_A 67 RCYADYLSMFEQEARRADGIQAVSIA-------TPN----GTHYSITKAALEAGLHVVC--------EKPLCFTVEQAEN 127 (398)
T ss_dssp GBCSSHHHHHHHHTTCTTCCSEEEEE-------SCG----GGHHHHHHHHHHTTCEEEE--------CSCSCSCHHHHHH
T ss_pred eeeCCHHHHHhcccccCCCCCEEEEC-------CCc----HHHHHHHHHHHHCCCeEEE--------eCCCcCCHHHHHH
Confidence 456789999875 8999996 221 2345667788889999987 2334566777777
Q ss_pred HHHHHHhCccEEEecCcccCCCCHHHHHHHHHHHHHHH
Q 012943 392 IAIAVREGADAVMLSGETAHGKFPLKAVKVMHTVALRT 429 (453)
Q Consensus 392 v~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~a 429 (453)
+..+...- ...+.-+..-. -+ .+++.+++++.+-
T Consensus 128 l~~~a~~~-g~~~~v~~~~r-~~--p~~~~~k~~i~~G 161 (398)
T 3dty_A 128 LRELSHKH-NRIVGVTYGYA-GH--QLIEQAREMIAAG 161 (398)
T ss_dssp HHHHHHHT-TCCEEECCGGG-GS--HHHHHHHHHHHTT
T ss_pred HHHHHHHc-CCeEEEEeccc-CC--HHHHHHHHHHhcC
Confidence 76665542 22222222222 22 3677777777643
No 484
>1zmr_A Phosphoglycerate kinase; transferase, glycolysis; 2.40A {Escherichia coli}
Probab=21.06 E-value=51 Score=33.64 Aligned_cols=99 Identities=15% Similarity=0.133 Sum_probs=62.8
Q ss_pred cEEEEecCCCCCCHHHHHHHHHhCCcEEEeecCCCChH-----HHHHHHHH-HHHHHhhcCCCcEEEEeecC-CCeeeec
Q 012943 101 TKIVCTIGPSTSSREMIWKLAEEGMNVARLNMSHGDHA-----SHQKTIDL-VKEYNSQFEDKAVAIMLDTK-GPEVRSG 173 (453)
Q Consensus 101 TKIi~TiGPss~s~e~i~~Li~aGmnvaRiNfSHg~~e-----~~~~~I~~-iR~a~~~~~~~~iaIllDLk-GPkIRtG 173 (453)
|+|-+++ .+|+.|++.|..|.= +||-..- .-...++- .+..++.++ ++|...-|.- |
T Consensus 35 ~RI~aal-------pTI~~ll~~gakvil--~SHlGRP~kG~~~~~~SL~pva~~L~~lLg-~~V~f~~d~~~G------ 98 (387)
T 1zmr_A 35 ARIRASL-------PTIELALKQGAKVMV--TSHLGRPTEGEYNEEFSLLPVVNYLKDKLS-NPVRLVKDYLDG------ 98 (387)
T ss_dssp HHHHHHH-------HHHHHHHHTTCEEEE--ECCCSSCBTTBCCGGGCSHHHHHHHHHHCS-SCEEEESCCTTC------
T ss_pred HHHHHHH-------HHHHHHHHCCCEEEE--EccCCCCCCCCcCCccCHHHHHHHHHHHhC-CCCEECcccccC------
Confidence 5555554 589999999998765 5885532 11112222 233445555 9998888876 6
Q ss_pred CCCCceeecCCCEEEEEeecCCCCccEEEecccccccccccCCEEEEeCC
Q 012943 174 DVPQPIILKEGQEFNFTIKRGVSTEDTVSVNYDDFVNDVEVGDILLVDGG 223 (453)
Q Consensus 174 ~l~~~i~L~~G~~v~lt~~~~~~~~~~I~v~~~~l~~~vk~Gd~IlIDDG 223 (453)
+.++.|+.+.|-.-+....+.. |.++|.+.+..---||+.|.
T Consensus 99 -----v~l~~G~VlLLEN~RF~~~E~~---nd~~fa~~LA~l~DvyVNDA 140 (387)
T 1zmr_A 99 -----VDVAEGELVVLENVRFNKGEKK---DDETLSKKYAALCDVFVMDA 140 (387)
T ss_dssp -----CCCCTTCEEEECCGGGSTTTTT---TCHHHHHHHHHTCSEEEECC
T ss_pred -----ccCCCCeEEEEcccCCCcchhc---CCHHHHHHHHhhCCEEEecc
Confidence 2288999988865543322221 55678887766555899984
No 485
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=21.06 E-value=1e+02 Score=30.57 Aligned_cols=48 Identities=15% Similarity=0.226 Sum_probs=35.9
Q ss_pred EEEecCCCCCCHHHHHHHHHh--CCcEEEeecCCCChHHHHHHHHHHHHH
Q 012943 103 IVCTIGPSTSSREMIWKLAEE--GMNVARLNMSHGDHASHQKTIDLVKEY 150 (453)
Q Consensus 103 Ii~TiGPss~s~e~i~~Li~a--GmnvaRiNfSHg~~e~~~~~I~~iR~a 150 (453)
+.+.+|....+.+.++.++++ |+++.=+.++||+...+.+.|+.+|+.
T Consensus 109 v~~~~g~~~~~~~~~~~l~~~~~g~~~i~i~~~~g~~~~~~~~i~~lr~~ 158 (351)
T 2c6q_A 109 LAASSGTGSSDFEQLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKR 158 (351)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCCEEEEECSCTTBHHHHHHHHHHHHH
T ss_pred eEeecCCChHHHHHHHHHHhccCCCCEEEEEecCCCcHHHHHHHHHHHHh
Confidence 555566554557788889998 999999999999877666667666653
No 486
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=20.84 E-value=1.8e+02 Score=28.34 Aligned_cols=51 Identities=10% Similarity=0.122 Sum_probs=36.0
Q ss_pred EEEecCCCCCCHH-HHHHHHHhCC----------------cEEEeecCCCChHHHHHHHHHHHHHHhh
Q 012943 103 IVCTIGPSTSSRE-MIWKLAEEGM----------------NVARLNMSHGDHASHQKTIDLVKEYNSQ 153 (453)
Q Consensus 103 Ii~TiGPss~s~e-~i~~Li~aGm----------------nvaRiNfSHg~~e~~~~~I~~iR~a~~~ 153 (453)
+.+.+....++.+ ..+.|.+.|+ +.+||+|++.+.++..+.++.++++.++
T Consensus 356 ~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~ 423 (425)
T 2r2n_A 356 LWIKVKGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAFQVLAQLIKE 423 (425)
T ss_dssp EEEEETTCSCCHHHHHTHHHHTTEECEEGGGGSSSTTSCCCEEEEECSSCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHHHCCcEEechhhhcCCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHHHH
Confidence 4445543334555 3566777764 5689999988999999999999887543
No 487
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3
Probab=20.80 E-value=1.1e+02 Score=29.12 Aligned_cols=20 Identities=15% Similarity=0.247 Sum_probs=16.4
Q ss_pred HHHHHHHHHhCCcEEEeecC
Q 012943 114 REMIWKLAEEGMNVARLNMS 133 (453)
Q Consensus 114 ~e~i~~Li~aGmnvaRiNfS 133 (453)
.+.|+.|-++|+|++|+...
T Consensus 48 ~~d~~~~k~~G~N~vR~~~~ 67 (353)
T 2c0h_A 48 ESTLSDMQSHGGNSVRVWLH 67 (353)
T ss_dssp HHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHHHcCCCEEEEcee
Confidence 45688899999999999743
No 488
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=20.68 E-value=5.4e+02 Score=24.29 Aligned_cols=96 Identities=10% Similarity=-0.006 Sum_probs=55.3
Q ss_pred HHHHhhhhcCCcEEEe------ccccCHHHHHHHHHHHHhcCCCceEEEEe---cChhhhccHHHHHhh-cCEEEEeCCC
Q 012943 271 EDIKFGVDNQVDFYAV------SFVKDAKVVHELKDYLKSCNADIHVIVKI---ESADSIPNLHSIISA-SDGAMVARGD 340 (453)
Q Consensus 271 ~DI~~a~~~gvd~I~l------SfV~sa~dv~~v~~~L~~~~~~i~IIakI---ET~~gv~NldeI~~~-sDgImIgRGD 340 (453)
+.+++.++.|+|+|.+ ++.-+.++-.++-+...+.... ||+-+ -|.++++......+. +|++|+-+-.
T Consensus 24 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g--ViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~ 101 (288)
T 2nuw_A 24 THAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHK--LIFQVGSLNLNDVMELVKFSNEMDILGVSSHSPY 101 (288)
T ss_dssp HHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSC--EEEECCCSCHHHHHHHHHHHHTSCCSEEEECCCC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--eEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCCc
Confidence 4557778999999876 2334444444444444333223 88876 346666666655444 7999997554
Q ss_pred ccccCCCCCHHHHHHHHHHHHHHcCCCEEEE
Q 012943 341 LGAELPIEDVPLLQEDIIRRCRSMQKPVIVA 371 (453)
Q Consensus 341 Lg~elg~e~v~~aqk~Ii~~c~~aGkpvi~a 371 (453)
......-+.+. +..-..|.+.+.|+++.
T Consensus 102 y~~~~s~~~l~---~~f~~va~a~~lPiilY 129 (288)
T 2nuw_A 102 YFPRLPEKFLA---KYYEEIARISSHSLYIY 129 (288)
T ss_dssp SSCSCCHHHHH---HHHHHHHHHCCSCEEEE
T ss_pred CCCCCCHHHHH---HHHHHHHHhcCCCEEEE
Confidence 42201112233 33334466678999886
No 489
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=20.63 E-value=41 Score=28.52 Aligned_cols=53 Identities=6% Similarity=0.216 Sum_probs=36.3
Q ss_pred hhccHHHHHh--hcCEEE--EeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEe
Q 012943 320 SIPNLHSIIS--ASDGAM--VARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVAT 372 (453)
Q Consensus 320 gv~NldeI~~--~sDgIm--IgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aT 372 (453)
.+..+++.+. ..|.|+ +|-.|+....+.+......++++..+++.+.++++.|
T Consensus 54 ~~~~~~~~~~~~~pd~vvi~~G~ND~~~~~~~~~~~~~~~~~i~~~~~~~~~vvl~~ 110 (185)
T 3hp4_A 54 ALRRLDALLEQYEPTHVLIELGANDGLRGFPVKKMQTNLTALVKKSQAANAMTALME 110 (185)
T ss_dssp HHHHHHHHHHHHCCSEEEEECCHHHHHTTCCHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHhhcCCCEEEEEeecccCCCCcCHHHHHHHHHHHHHHHHHcCCeEEEEe
Confidence 3444555544 256444 4555876666667777888999999999998887753
No 490
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=20.50 E-value=1.7e+02 Score=27.97 Aligned_cols=86 Identities=10% Similarity=0.076 Sum_probs=52.3
Q ss_pred hhccHHHHHh--hcCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCCCCchHHHHHHHHHHH
Q 012943 320 SIPNLHSIIS--ASDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHPTPTRAEVSDIAIAVR 397 (453)
Q Consensus 320 gv~NldeI~~--~sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~~PtrAEv~Dv~nav~ 397 (453)
...+++++++ .+|.|+|+ .|.. ....++..|-++||+|++- +....+.+|...+..+..
T Consensus 55 ~~~~~~~ll~~~~~D~V~i~-------tp~~----~h~~~~~~al~~gk~vl~E--------KP~~~~~~e~~~l~~~a~ 115 (330)
T 3e9m_A 55 AYGSYEELCKDETIDIIYIP-------TYNQ----GHYSAAKLALSQGKPVLLE--------KPFTLNAAEAEELFAIAQ 115 (330)
T ss_dssp CBSSHHHHHHCTTCSEEEEC-------CCGG----GHHHHHHHHHHTTCCEEEC--------SSCCSSHHHHHHHHHHHH
T ss_pred eeCCHHHHhcCCCCCEEEEc-------CCCH----HHHHHHHHHHHCCCeEEEe--------CCCCCCHHHHHHHHHHHH
Confidence 4678899987 58999996 3322 2345566788899999872 333667777777766665
Q ss_pred hCccEEEecCcccCCCCHHHHHHHHHHHHHH
Q 012943 398 EGADAVMLSGETAHGKFPLKAVKVMHTVALR 428 (453)
Q Consensus 398 ~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~ 428 (453)
.. ...+.-+- ..--+ .+++.+++++.+
T Consensus 116 ~~-g~~~~v~~-~~r~~--p~~~~~k~~i~~ 142 (330)
T 3e9m_A 116 EQ-GVFLMEAQ-KSVFL--PITQKVKATIQE 142 (330)
T ss_dssp HT-TCCEEECC-SGGGC--HHHHHHHHHHHT
T ss_pred Hc-CCeEEEEE-hhhhC--HHHHHHHHHHhC
Confidence 42 22222111 11123 367777777764
No 491
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=20.49 E-value=1.4e+02 Score=29.05 Aligned_cols=52 Identities=21% Similarity=0.298 Sum_probs=38.9
Q ss_pred HHHHHHHHhCCcEEEeec-CCCC-------hHHHHHHHHHHHHHHhhcCCCcEEEEeecCCCee
Q 012943 115 EMIWKLAEEGMNVARLNM-SHGD-------HASHQKTIDLVKEYNSQFEDKAVAIMLDTKGPEV 170 (453)
Q Consensus 115 e~i~~Li~aGmnvaRiNf-SHg~-------~e~~~~~I~~iR~a~~~~~~~~iaIllDLkGPkI 170 (453)
+..++|+++|.++.=+|. |-.. .|++.+++..|+...+. + +.|.+|+.=|++
T Consensus 50 ~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~-~---vpiSIDT~~~~V 109 (294)
T 2y5s_A 50 RRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPL-N---VPLSIDTYKPAV 109 (294)
T ss_dssp HHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGG-C---SCEEEECCCHHH
T ss_pred HHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhC-C---CeEEEECCCHHH
Confidence 356789999999999998 4322 57888888888887654 3 457779877654
No 492
>2p4v_A Transcription elongation factor GREB; transcript cleavage, GRE-factors, RNA polymerase; 2.60A {Escherichia coli}
Probab=20.49 E-value=2.6e+02 Score=24.42 Aligned_cols=84 Identities=21% Similarity=0.240 Sum_probs=47.9
Q ss_pred HHHHHHHHhhcCCCcEEEEeecC---CCeeeecCCCCceee--cCCCEEEEEee---cCCCCccEEEeccc--ccccccc
Q 012943 144 IDLVKEYNSQFEDKAVAIMLDTK---GPEVRSGDVPQPIIL--KEGQEFNFTIK---RGVSTEDTVSVNYD--DFVNDVE 213 (453)
Q Consensus 144 I~~iR~a~~~~~~~~iaIllDLk---GPkIRtG~l~~~i~L--~~G~~v~lt~~---~~~~~~~~I~v~~~--~l~~~vk 213 (453)
=..|+++.+++. -+-.+|.. +-++..|.. +.+ ..|++.+++.- ......+.|++..| .-+-.-+
T Consensus 59 e~rI~~L~~~L~---~A~vid~~~~~~~~V~~Gs~---V~l~~~~g~~~~y~iVg~~ead~~~~~IS~~SPlg~ALlGk~ 132 (158)
T 2p4v_A 59 DRRVRYLTKCME---NLKIVDYSPQQEGKVFFGAW---VEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPMARALLKKE 132 (158)
T ss_dssp HHHHHHHHHHHH---HCEECCCCSSSCSSCSSSCE---EEEECTTCCCEEEEBCCSTTCCSSSCCBCTTSHHHHHSTTCC
T ss_pred HHHHHHHHHHHh---hCeecCCccCCCCEEeccEE---EEEEECCCCEEEEEEECHHHcCccCCeecCCCHHHHHhcCCC
Confidence 334556655553 23444543 334554433 555 35666655542 11123356776665 2223568
Q ss_pred cCCEEEEe--CCeeEEEEEEEe
Q 012943 214 VGDILLVD--GGMMSLAVKSKT 233 (453)
Q Consensus 214 ~Gd~IlID--DG~I~L~V~ev~ 233 (453)
+||.|-+. +|...++|.++.
T Consensus 133 vGD~v~v~~P~G~~~~~I~~I~ 154 (158)
T 2p4v_A 133 VGDLAVVNTPAGEASWYVNAIE 154 (158)
T ss_dssp TTCEEEEECSSCEEEEEEEEEE
T ss_pred CCCEEEEEcCCCcEEEEEEEEE
Confidence 99999997 788999999875
No 493
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=20.43 E-value=1.3e+02 Score=29.08 Aligned_cols=86 Identities=12% Similarity=0.127 Sum_probs=52.9
Q ss_pred hhccHHHHHhh--cCEEEEeCCCccccCCCCCHHHHHHHHHHHHHHcCCCEEEEechhhhhccCC-CCchHHHHHHHHHH
Q 012943 320 SIPNLHSIISA--SDGAMVARGDLGAELPIEDVPLLQEDIIRRCRSMQKPVIVATNMLESMIDHP-TPTRAEVSDIAIAV 396 (453)
Q Consensus 320 gv~NldeI~~~--sDgImIgRGDLg~elg~e~v~~aqk~Ii~~c~~aGkpvi~aTqmLeSM~~~~-~PtrAEv~Dv~nav 396 (453)
...+++++++. .|.++|+ .|.. .-..++.+|-++||+|++ ..| ..+.+|...+..+.
T Consensus 55 ~~~~~~~ll~~~~vD~V~i~-------tp~~----~H~~~~~~al~aGkhV~~---------EKPla~~~~e~~~l~~~a 114 (352)
T 3kux_A 55 VVSDPQMLFNDPSIDLIVIP-------TPND----THFPLAQSALAAGKHVVV---------DKPFTVTLSQANALKEHA 114 (352)
T ss_dssp EESCHHHHHHCSSCCEEEEC-------SCTT----THHHHHHHHHHTTCEEEE---------CSSCCSCHHHHHHHHHHH
T ss_pred eECCHHHHhcCCCCCEEEEe-------CChH----HHHHHHHHHHHCCCcEEE---------ECCCcCCHHHHHHHHHHH
Confidence 45788999986 8999996 2321 224556678899999988 444 67777877777666
Q ss_pred HhCccEEEecCcccCCCCHHHHHHHHHHHHHHH
Q 012943 397 REGADAVMLSGETAHGKFPLKAVKVMHTVALRT 429 (453)
Q Consensus 397 ~~G~D~vmLs~ETA~G~yP~eaV~~m~~I~~~a 429 (453)
...-=.+|.. - ..--+| +++.+++++.+-
T Consensus 115 ~~~g~~~~v~-~-~~r~~p--~~~~~~~~i~~g 143 (352)
T 3kux_A 115 DDAGLLLSVF-H-NRRWDS--DFLTLKTLLAEG 143 (352)
T ss_dssp HHTTCCEEEC-C-GGGGCH--HHHHHHHHHHHT
T ss_pred HHcCCeEEEE-e-ecccCH--HHHHHHHHHhcC
Confidence 5421112221 1 111123 677777777653
No 494
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=20.35 E-value=2e+02 Score=27.04 Aligned_cols=59 Identities=14% Similarity=0.194 Sum_probs=40.7
Q ss_pred eeecCCCEEEEEeec--CC---CCccEEEecccccccc---cccCCEEEEeCCeeEEEEEEEeCCeEEE
Q 012943 179 IILKEGQEFNFTIKR--GV---STEDTVSVNYDDFVND---VEVGDILLVDGGMMSLAVKSKTKDLVKC 239 (453)
Q Consensus 179 i~L~~G~~v~lt~~~--~~---~~~~~I~v~~~~l~~~---vk~Gd~IlIDDG~I~L~V~ev~~~~v~~ 239 (453)
.-++.|++.+++... .+ +......++-..|... +++|+.+.+++ . ..+|.++.++.|..
T Consensus 62 ~Gm~vGek~~v~Ippe~AYGe~~~~lv~~vp~~~f~~~~~~~~vG~~~~~~~-~-~g~V~~v~~~~V~v 128 (231)
T 3prb_A 62 LEMDVGEEREVVLPPEKAFGKRDPSKIKLIPLSEFTKRGIKPIKGLTITIDG-I-PGKIVSINSGRVLV 128 (231)
T ss_dssp HTCCTTCEEEEEECGGGTTCCCCGGGEEEEETHHHHTTTCCCCTTCEEEETT-E-EEEEEEEETTEEEE
T ss_pred cCCCCCCEEEEEeCcHHhcCCCChHHEEecCHHHCCcccCCCCCCcEEEecC-C-CEEEEEEcCCEEEE
Confidence 347899999998763 33 3344566666667642 67899999864 4 46788888887654
No 495
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=20.27 E-value=2.1e+02 Score=28.20 Aligned_cols=48 Identities=13% Similarity=0.236 Sum_probs=34.3
Q ss_pred HHHHHHHHHhCCcEEEeecCC--CChHHHHHHHHHHHHHHhhcCCCcEEEEeec
Q 012943 114 REMIWKLAEEGMNVARLNMSH--GDHASHQKTIDLVKEYNSQFEDKAVAIMLDT 165 (453)
Q Consensus 114 ~e~i~~Li~aGmnvaRiNfSH--g~~e~~~~~I~~iR~a~~~~~~~~iaIllDL 165 (453)
.+..+++.+.|-+.+.|++.| ++.+.-.+.++.+|++ .+ ..+.|++|.
T Consensus 151 ~~~a~~~~~~Gf~~iKlk~g~~g~~~~~d~~~v~avR~a---~g-~~~~l~vDa 200 (374)
T 3sjn_A 151 VAIVQGLKDQGFSSIKFGGGVMGDDPDTDYAIVKAVREA---AG-PEMEVQIDL 200 (374)
T ss_dssp HHHHHHHHTTTCSEEEEECTTTTSCHHHHHHHHHHHHHH---HC-SSSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEeccCCCCCCHHHHHHHHHHHHHH---hC-CCCeEEEEC
Confidence 456778889999999999987 3566666666666654 44 456677774
No 496
>3s9z_A Malate synthase G; inhibitor complex, structural genomics, mycobacterium tuberc structural proteomics project, XMTB; HET: I92; 1.79A {Mycobacterium tuberculosis} PDB: 3s9i_A* 3sad_A* 3saz_A* 3sb0_A* 1n8i_A 1n8w_A* 2gq3_A* 4ex4_A
Probab=20.22 E-value=1.3e+02 Score=32.95 Aligned_cols=51 Identities=12% Similarity=0.052 Sum_probs=40.8
Q ss_pred CcEEEeccccCHHHHHHHHHHHH-------hcCCCceEEEEecChhhhccHHHHHhhc
Q 012943 281 VDFYAVSFVKDAKVVHELKDYLK-------SCNADIHVIVKIESADSIPNLHSIISAS 331 (453)
Q Consensus 281 vd~I~lSfV~sa~dv~~v~~~L~-------~~~~~i~IIakIET~~gv~NldeI~~~s 331 (453)
-=||..|+-+.++++.-..++.. -....+++-.+|||..+.-|++||+.+.
T Consensus 392 siYivkPKmhgp~Evaf~~~lF~~vE~~LgLp~~TiK~gVmdEerrts~nl~eci~al 449 (741)
T 3s9z_A 392 SIYIVKPKMHGPAEVAFTCELFSRVEDVLGLPQNTMKIGIMDEERRTTVNLKACIKAA 449 (741)
T ss_dssp CEEEEECCCCSHHHHHHHHHHHHHHHHHHTCCTTCEEEEEEECSHHHHTTHHHHHHHT
T ss_pred ceeEEecCCCChHHHHHHHHHHHHHHHHhCCCCCcEEEEEEeccchhhhhHHHHHHHH
Confidence 34899999999999986544432 2235689999999999999999999873
No 497
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=20.17 E-value=2.3e+02 Score=28.16 Aligned_cols=50 Identities=8% Similarity=0.195 Sum_probs=32.5
Q ss_pred HHHHHHHhCCcEEEeecC----CCCh----------------HHHHHHHHHHHHHHhhcCCCcEEEEeecC
Q 012943 116 MIWKLAEEGMNVARLNMS----HGDH----------------ASHQKTIDLVKEYNSQFEDKAVAIMLDTK 166 (453)
Q Consensus 116 ~i~~Li~aGmnvaRiNfS----Hg~~----------------e~~~~~I~~iR~a~~~~~~~~iaIllDLk 166 (453)
..+++.++|-+.+.|... ||.. ...+..++.++.+.+..+ ..+.|++|.-
T Consensus 157 ~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~~~~~GG~~~~~~~~~~~e~v~avR~a~G-~d~~l~vDan 226 (410)
T 2gl5_A 157 AARAALDDGYDAIKVDPLEIDRNGDDCVFQNRNRNYSGLLLADQLKMGEARIAAMREAMG-DDADIIVEIH 226 (410)
T ss_dssp HHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCCGGGGSCCCHHHHHHHHHHHHHHHHHHC-SSSEEEEECT
T ss_pred HHHHHHHcCCCEEEEeccccCCcccccccccccccccCccchhHHHHHHHHHHHHHHhcC-CCCEEEEECC
Confidence 456678899999999985 6751 233444555555555555 5567777763
No 498
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.16 E-value=2.1e+02 Score=22.18 Aligned_cols=77 Identities=14% Similarity=0.083 Sum_probs=42.6
Q ss_pred CCCeeeecC-CCCceeecCCCEEEEEeec-CCCCccEEEecccccccccccCCEEEEeCCeeEEEEEEEe---CCeEEEE
Q 012943 166 KGPEVRSGD-VPQPIILKEGQEFNFTIKR-GVSTEDTVSVNYDDFVNDVEVGDILLVDGGMMSLAVKSKT---KDLVKCI 240 (453)
Q Consensus 166 kGPkIRtG~-l~~~i~L~~G~~v~lt~~~-~~~~~~~I~v~~~~l~~~vk~Gd~IlIDDG~I~L~V~ev~---~~~v~~~ 240 (453)
.-|+|+... ....+.+..|+.++|...- +.-.....|.-....+. ...-.+..+++.-.|.+..+. .+...|.
T Consensus 20 ~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~--~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 97 (118)
T 2e7c_A 20 EPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLD--TSRVHVRTSDFDTVFFVRQAARSDSGEYELS 97 (118)
T ss_dssp EEEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEETTEECC--CSSCEEEECSSEEEEEESSCCTTTCEEEEEE
T ss_pred cCCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEECCEECC--CCcEEEEECCCeEEEEECCCChhcCEEEEEE
Confidence 357776532 3457889999999998652 11122233332211111 112244455666667766653 3468899
Q ss_pred EeeC
Q 012943 241 VVDG 244 (453)
Q Consensus 241 V~ng 244 (453)
+.|.
T Consensus 98 a~N~ 101 (118)
T 2e7c_A 98 VQIE 101 (118)
T ss_dssp EECS
T ss_pred EEeC
Confidence 9874
No 499
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=20.16 E-value=4.8e+02 Score=24.21 Aligned_cols=34 Identities=21% Similarity=0.353 Sum_probs=26.8
Q ss_pred HHHHHHhCccEEEecCcccCCCCHHHHHHHHHHH
Q 012943 392 IAIAVREGADAVMLSGETAHGKFPLKAVKVMHTV 425 (453)
Q Consensus 392 v~nav~~G~D~vmLs~ETA~G~yP~eaV~~m~~I 425 (453)
...++..|+|.++...--.....|.++++.+++-
T Consensus 202 ~~~~~~aGad~lVvGr~I~~a~dp~~a~~~i~~~ 235 (239)
T 3tr2_A 202 PRAAIQAGSDYLVIGRPITQSTDPLKALEAIDKD 235 (239)
T ss_dssp HHHHHHHTCSEEEECHHHHTSSSHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEChHHhCCCCHHHHHHHHHHH
Confidence 4468899999988876666778899998877654
No 500
>3di4_A Uncharacterized protein DUF1989; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=20.15 E-value=2.1e+02 Score=27.97 Aligned_cols=55 Identities=20% Similarity=0.167 Sum_probs=37.0
Q ss_pred ceeecCCCEEEEEeecCCCCccEEEeccccccc-------------ccccCCEEEEeC--CeeEEEEEEE
Q 012943 178 PIILKEGQEFNFTIKRGVSTEDTVSVNYDDFVN-------------DVEVGDILLVDG--GMMSLAVKSK 232 (453)
Q Consensus 178 ~i~L~~G~~v~lt~~~~~~~~~~I~v~~~~l~~-------------~vk~Gd~IlIDD--G~I~L~V~ev 232 (453)
...|++||.++|+.-.+.--...+..|.++..+ .+.+|+.++=+. |+..++|++-
T Consensus 60 s~~V~~Gq~lRI~d~eG~Qv~Dll~~na~d~~ER~s~~dTr~~~~~~lt~G~~L~Sn~g~~Rpl~tIv~D 129 (286)
T 3di4_A 60 CFEVKAGQFFRISSVEGPQVGDLNLHNLHDLTERFFSGKTRALHGTHVTTGERLWSNLPYLRPMATIIED 129 (286)
T ss_dssp EEEECTTCEEEEEECSSCCCEEEEEEETTEEEEEBCHHHHHHHHCSBCCTTCEEEBCTTTCCEEEEEEEE
T ss_pred EEEECCCCEEEEEeCCCCeEEEEEEecCCCccccccHHHHHHHHhccCCCCCEeEeCCCCCceeEEEEec
Confidence 478999999999865433222333334333222 578999999997 6898888764
Done!