Query 012945
Match_columns 453
No_of_seqs 145 out of 1382
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 19:16:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012945.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012945hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rtk_A 60 kDa chaperonin 2; he 100.0 2E-102 5E-107 824.9 35.8 438 5-451 52-499 (546)
2 1kp8_A Groel protein; chaperon 100.0 4E-101 1E-105 815.6 39.9 440 5-451 52-501 (547)
3 1we3_A CPN60(groel); chaperoni 100.0 5E-100 2E-104 808.1 43.2 440 5-451 52-503 (543)
4 1iok_A Chaperonin 60; chaperon 100.0 5E-101 2E-105 815.5 34.3 441 5-451 53-503 (545)
5 3p9d_C T-complex protein 1 sub 100.0 2.5E-85 8.7E-90 699.7 27.1 416 5-451 61-564 (590)
6 3iyg_H T-complex protein 1 sub 100.0 3.7E-83 1.3E-87 676.6 37.0 389 5-451 53-492 (515)
7 3ko1_A Chaperonin; 9-fold symm 100.0 2.6E-83 8.9E-88 682.0 35.0 386 5-451 72-511 (553)
8 3iyg_B T-complex protein 1 sub 100.0 5.6E-83 1.9E-87 675.4 37.3 385 5-451 54-489 (513)
9 3ruv_A Chaperonin, CPN; double 100.0 2.8E-83 9.5E-88 681.5 35.0 386 5-451 61-497 (543)
10 3aq1_B Thermosome subunit; gro 100.0 3.7E-83 1.3E-87 674.9 33.8 386 5-451 15-454 (500)
11 3p9d_A T-complex protein 1 sub 100.0 1.8E-83 6.1E-88 684.6 28.9 391 5-451 66-526 (559)
12 1q3q_A Thermosome alpha subuni 100.0 2.4E-82 8.2E-87 675.0 34.9 386 5-451 65-503 (548)
13 3iyg_A T-complex protein 1 sub 100.0 5.6E-82 1.9E-86 670.0 36.1 391 5-451 52-506 (529)
14 3p9d_D T-complex protein 1 sub 100.0 6.2E-83 2.1E-87 676.7 28.4 390 5-451 61-506 (528)
15 1a6d_A Thermosome (alpha subun 100.0 3.4E-82 1.2E-86 673.4 34.1 385 5-451 64-500 (545)
16 3iyg_D T-complex protein 1 sub 100.0 6.4E-82 2.2E-86 668.0 35.3 386 5-451 53-496 (518)
17 3iyg_E T-complex protein 1 sub 100.0 1.3E-81 4.6E-86 665.5 37.6 393 5-451 52-493 (515)
18 1a6d_B Thermosome (beta subuni 100.0 4.4E-82 1.5E-86 672.7 33.4 386 5-451 63-501 (543)
19 3iyg_Q T-complex protein 1 sub 100.0 6.1E-81 2.1E-85 660.1 36.5 392 5-451 53-490 (512)
20 3iyg_G T-complex protein 1 sub 100.0 1.8E-80 6.3E-85 656.4 36.7 386 5-451 51-492 (515)
21 3p9d_G T-complex protein 1 sub 100.0 4.7E-82 1.6E-86 672.5 23.0 388 5-451 66-505 (550)
22 3p9d_E T-complex protein 1 sub 100.0 5.8E-81 2E-85 665.6 30.5 392 5-451 87-536 (562)
23 3p9d_B T-complex protein 1 sub 100.0 7.3E-82 2.5E-86 669.3 23.3 385 5-451 60-496 (527)
24 3iyg_Z T-complex protein 1 sub 100.0 5.2E-80 1.8E-84 652.8 33.9 385 5-451 52-495 (517)
25 3p9d_F T-complex protein 1 sub 100.0 1.2E-79 4.3E-84 654.3 23.6 386 5-451 59-515 (546)
26 3p9d_H T-complex protein 1 sub 100.0 6E-79 2E-83 650.9 22.0 386 5-451 68-526 (568)
27 3m6c_A 60 kDa chaperonin 1; ch 100.0 1.9E-49 6.4E-54 357.8 14.5 189 140-328 2-194 (194)
28 3osx_A 60 kDa chaperonin; alph 100.0 7.3E-48 2.5E-52 348.1 15.5 185 143-327 12-200 (201)
29 1srv_A Protein (groel (HSP60 c 100.0 1.3E-38 4.3E-43 274.7 14.6 144 145-288 1-144 (145)
30 1gml_A T-complex protein 1 sub 99.9 6.1E-22 2.1E-26 181.0 12.8 145 138-336 2-174 (178)
31 1ass_A Thermosome; chaperonin, 99.8 3.2E-18 1.1E-22 153.4 13.1 127 143-292 1-154 (159)
32 2lnd_A De novo designed protei 36.0 81 0.0028 24.0 5.7 50 181-231 35-85 (112)
No 1
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=1.5e-102 Score=824.88 Aligned_cols=438 Identities=31% Similarity=0.456 Sum_probs=408.7
Q ss_pred HHHHhhhccccCcc----ccccccchhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcC-CCChHHHHHHHHHHHHH
Q 012945 5 ACSLASRVRLINTT----GTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADA 79 (453)
Q Consensus 5 ~~~il~~~~~~~p~----~~~~~~~~~~~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~-g~~P~~I~~G~~~a~~~ 79 (453)
..+|||+|++.||+ ||++ +++|++||+++||||||+||||++||++|+++++ |+||+.|++||++|++.
T Consensus 52 G~TIlk~i~v~hp~~n~gAkll------~e~a~~qd~e~GDGTTtvvVLAgeLL~ea~~li~~GihP~~I~~G~~~A~~~ 125 (546)
T 3rtk_A 52 GVSIAKEIELEDPYEKIGAELV------KEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEK 125 (546)
T ss_dssp ---------CCCHHHHHHHHHH------HHHHTSCC-------CHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCCChhhhHHHHHH------HHHHHhhhhhhCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Confidence 35899999999999 7776 5899999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHhccccccCCHHHHHHHHHHhcCCChhHHHHHHHHHHhhccCCceeeecCCcccceeEEEeeEEEecccCCCcccc
Q 012945 80 VVRNLDCQARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITIFDRKALYNELNFVKGMKLEWGLKSPYFFT 159 (453)
Q Consensus 80 ~~~~L~~~s~~v~~~~~l~~va~~s~~~~~~la~li~~A~~~vg~~~~I~v~~g~~~~d~~~lv~G~~~~~g~~~p~~~~ 159 (453)
++++|+++++|+++.++|.++|++|++ ++.+++++++|+.+++.+|.|+|+++++..+++++++||+|++||.||||++
T Consensus 126 a~e~L~~~s~~v~~~e~L~~vA~iS~~-~~~i~~liadAv~~V~~dgvI~Ve~~~~~~~ds~lveGm~fdkg~~sp~~vt 204 (546)
T 3rtk_A 126 VTETLLKGAKEVETKEQIAATAAISAG-DQSIGDLIAEAMDKVGNEGVITVEESNTFGLQLELTEGMRFDKGYISGYFVT 204 (546)
T ss_dssp HHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHHHHHHHHHHHSCTTSEEEEECCSSSSCEEEEECEEEESCCBSSGGGCS
T ss_pred HHHHHHHhcccCCChHHHHhHeEEeCC-chHHHHHHHHHHHHhccCCceEEEecCCcccceEEeeeEEEcCCccCccccc
Confidence 999999999999999999999999998 8899999999999999999999998888878999999999999999999999
Q ss_pred cccccceeecCeEEEecccccCCHHHHHHHHHHHHHcCCCEEEEecCcchhhhhhHHhhhccCCcceEEEEccCcccchh
Q 012945 160 HKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRK 239 (453)
Q Consensus 160 ~~~~~~~~l~~p~Ili~d~~i~~~~~i~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~~~~r~ 239 (453)
+|++|+.+++||+|+++|++|+++++++++++++.++|+||||++++|+++||++|+.|+++|++++++||.|+|+++|+
T Consensus 205 ~~e~m~~~len~kIll~d~kIs~~~~l~~~le~I~~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~~~~~rk 284 (546)
T 3rtk_A 205 DPERQEAVLEDPYILLVSSKVSTVKDLLPLLEKVIGAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRK 284 (546)
T ss_dssp BTTTTBEEEESCEEEEBSSEECCSTTTHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHHSSCCEEEEECSSCHHHHH
T ss_pred CcccCeeEecccEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHhCCCCceEEEEeccccccccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhCCEEeeCCCCCCccCCCCCCceeeeEEEEecceEEEEcCCCChhhHHHHHHHHHHHhhhccc----HHHH
Q 012945 240 AIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLK 315 (453)
Q Consensus 240 ~~Le~la~~tG~~i~~~~~~~~~~~~~~~~LG~~~~v~i~~~~~~~~~g~~~~~~i~~r~~~l~~~~~~~~s----~~l~ 315 (453)
++|+|||++|||++++++.|++++++++++||+|++|+++++++++++||+++++++.|+++|++++++++| ++|+
T Consensus 285 ~~le~ia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~i~~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~ 364 (546)
T 3rtk_A 285 AMLQDMAILTGGQVISEEVGLTLENADLSLLGKARKVVVTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDREKLQ 364 (546)
T ss_dssp HHHHHHHHHHTCCCBCSSSSCCSTTCCTTTSEEEEEEEECSSCEEEEEECSCHHHHHHHHHHHHHHHHTCSCHHHHHHHH
T ss_pred hhHHHHHHHhCCEEeeccccCccccCCHhhCCeeEEEEEcCCeEEEEcCCCCHHHHHHHHHHHHHHHhhccchhhHHHHH
Confidence 999999999999999998999999999999999999999999999999999999999999999999999988 9999
Q ss_pred HHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHHcCCcCChhHHHHHHHHHHHhhcCCChhHHHHHHHHHHH
Q 012945 316 DRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTTNSDQKIGVQIVQNA 395 (453)
Q Consensus 316 eRl~~l~g~~~tI~vrG~t~~~l~E~er~i~DAl~~~~~al~~gvVpGGGa~e~~~s~~L~~~~~~~~~e~~g~~~~a~A 395 (453)
||+++|+|++|||+|||+|+++++|+||+++||||++|+++++|+|||||++|+++|++|++++ .++++|+|+++|++|
T Consensus 365 erlakl~g~~atI~vrG~te~~l~E~er~l~DAl~a~r~av~~giVpGGGa~e~~~s~~L~~~~-~~g~eq~~i~~~a~A 443 (546)
T 3rtk_A 365 ERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVTLLQAAPTLDELK-LEGDEATGANIVKVA 443 (546)
T ss_dssp HHHHHHHHCEEEEECCCCSSTHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHTTGGGSTTSC-CCTTHHHHHHHHHHH
T ss_pred HHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHhCCcccCCcHHHHHHHHHHHHhc-cccHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999987 789999999999999
Q ss_pred HHHHHHHHHHhcCCChHHH-HHHHhcCCCCeeEeCCCCcccchhhcceeeccCcCcc
Q 012945 396 LKMAAYLIASNAGVDGSVI-DKLLEQDSSDLGYNPARGLFFQIKKIKSKKAWCFPMF 451 (453)
Q Consensus 396 L~~~p~~La~NaG~d~~~v-~~l~~~~~~~~G~d~~~~~~~dm~~~gi~ep~~~~~~ 451 (453)
|+.||++||+|||+|+.++ ++|++. ..++|||+.+|++.||++.|||||+.||..
T Consensus 444 Le~ip~~La~NaG~d~~~vv~~l~~~-~~~~G~d~~~g~~~Dm~~~gI~dp~~vk~~ 499 (546)
T 3rtk_A 444 LEAPLKQIAFNSGLEPGVVAEKVRNL-PAGHGLNAQTGVYEDLLAAGVADPVKVTRS 499 (546)
T ss_dssp TTHHHHHHHTTTTCCHHHHHHHHHHS-CTTEECCSSSCCCEETTTTTCEEEHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHhh-cCCEeEcCCCCcEeeHHHcCCEecHHHHHH
Confidence 9999999999999999999 999885 346999999999999999999999999864
No 2
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=4.3e-101 Score=815.57 Aligned_cols=440 Identities=33% Similarity=0.479 Sum_probs=426.3
Q ss_pred HHHHhhhccccCc----cccccccchhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcC-CCChHHHHHHHHHHHHH
Q 012945 5 ACSLASRVRLINT----TGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADA 79 (453)
Q Consensus 5 ~~~il~~~~~~~p----~~~~~~~~~~~~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~-g~~P~~I~~G~~~a~~~ 79 (453)
..+|||+|++.|| .||++ +++|++||+++||||||+||||++||++++++++ |+||+.|++||++|++.
T Consensus 52 G~tIlk~i~~~hp~en~~Akll------~e~a~~qd~e~GDGTTtvvVLA~~Ll~ea~~lv~~GihP~~I~~G~~~A~~~ 125 (547)
T 1kp8_A 52 GVSVAREIELEDKFENMGAQMV------KEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTV 125 (547)
T ss_dssp HHHHHHHCCCSSHHHHHHHHHH------HHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHccccChhhhHHHHHH------HHHHHhhccccCCCcchhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Confidence 4689999999999 99988 4899999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHhccccccCCHHHHHHHHHHhcCCChhHHHHHHHHHHhhccCCceeeecCCcccceeEEEeeEEEecccCCCcccc
Q 012945 80 VVRNLDCQARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITIFDRKALYNELNFVKGMKLEWGLKSPYFFT 159 (453)
Q Consensus 80 ~~~~L~~~s~~v~~~~~l~~va~~s~~~~~~la~li~~A~~~vg~~~~I~v~~g~~~~d~~~lv~G~~~~~g~~~p~~~~ 159 (453)
++++|+++++|+++.++|.++|++|++++++|++++++|+.+++++|.|+|++|++++|++++++|++|++||.||||++
T Consensus 126 a~~~L~~~s~~v~~~e~l~~vA~iS~~~~~~i~~liadAv~~V~~dg~I~Ve~G~~~~ds~~lveG~~fdkg~~~p~~vt 205 (547)
T 1kp8_A 126 AVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFIN 205 (547)
T ss_dssp HHHHHHHHCBCCCSHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCTTSEEEEECCSSSSCEEEEESCEEESCCBSSTTCCS
T ss_pred HHHHHHHhCcCCCCHHHHHHHHHHhccchhHHHHHHHHHHHHhCcCCcEEEEeCCccccccEEEecEEEecCcccccccc
Confidence 99999999999999999999999999889999999999999999999999999999988779999999999999999999
Q ss_pred cccccceeecCeEEEecccccCCHHHHHHHHHHHHHcCCCEEEEecCcchhhhhhHHhhhccCCcceEEEEccCcccchh
Q 012945 160 HKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRK 239 (453)
Q Consensus 160 ~~~~~~~~l~~p~Ili~d~~i~~~~~i~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~~~~r~ 239 (453)
+|++|+.+++||+|+++|++|+++++++++++++.++|+||||++++|+++||++|+.|++++.++|+|||+|+|+++|+
T Consensus 206 ~~~~m~~~lenp~Ill~d~~Is~~~~l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~rk 285 (547)
T 1kp8_A 206 KPETGAVELESPFILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRK 285 (547)
T ss_dssp BTTTTBEEEESCEEECEESEECCGGGTHHHHHHHHGGGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECSSCHHHHH
T ss_pred CcccCceEecCceEEEEcCcCCCHHHHHHHHHHHHhcCCCEEEECCCcCHHHHHHHHhcccccceeEEEEeccccccccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhCCEEeeCCCCCCccCCCCCCceeeeEEEEecceEEEEcCCCChhhHHHHHHHHHHHhhhccc----HHHH
Q 012945 240 AIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLK 315 (453)
Q Consensus 240 ~~Le~la~~tG~~i~~~~~~~~~~~~~~~~LG~~~~v~i~~~~~~~~~g~~~~~~i~~r~~~l~~~~~~~~s----~~l~ 315 (453)
++|+|||++|||++++++.|++++++++++||+|++|+++++++++++||+++++++.|+++|+.+++.++| ++|+
T Consensus 286 ~~le~ia~~tG~~ii~~~~g~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~ 365 (547)
T 1kp8_A 286 AMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQ 365 (547)
T ss_dssp HHHHHHHHHHTCCCEEGGGTCCSTTCCTTTSEEEEEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHHSCCSHHHHHHHH
T ss_pred HHHHHHHHHhCCeEecccccCCcccCCHHHCCceeEEEEccceEEEEcCCCCHHHHHHHHHHHHHHhhcccchhhHHHHH
Confidence 999999999999999998888999999999999999999999999999999999999999999999999988 9999
Q ss_pred HHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHHcCCcCChhHHHHHHHHHHHhhcCCChhHHHHHHHHHHH
Q 012945 316 DRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTTNSDQKIGVQIVQNA 395 (453)
Q Consensus 316 eRl~~l~g~~~tI~vrG~t~~~l~E~er~i~DAl~~~~~al~~gvVpGGGa~e~~~s~~L~~~~~~~~~e~~g~~~~a~A 395 (453)
||+++|+|++|||+|||+|+++++|+||++|||||++|+++++|+|||||++|++++++|++++..++++|+|+++|++|
T Consensus 366 erlakl~~~~~tI~vrG~te~~l~E~kr~i~DAl~~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~g~~q~~i~~~a~A 445 (547)
T 1kp8_A 366 ERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRGQNADQNVGIKVALRA 445 (547)
T ss_dssp HHHHHHHHCEEEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHHHHHHTTTCCCSSHHHHHHHHHHHHH
T ss_pred HHHHHhcCCeEEEEEcCCcHhHHHHHHHHHHHHHHHHHHhccCCEEeCCcHHHHHHHHHHHHHhccCchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998876688999999999999
Q ss_pred HHHHHHHHHHhcCCChHHH-HHHHhcCCCCeeEeCCCCcccchhhcceeeccCcCcc
Q 012945 396 LKMAAYLIASNAGVDGSVI-DKLLEQDSSDLGYNPARGLFFQIKKIKSKKAWCFPMF 451 (453)
Q Consensus 396 L~~~p~~La~NaG~d~~~v-~~l~~~~~~~~G~d~~~~~~~dm~~~gi~ep~~~~~~ 451 (453)
|+.||++||+|||+|+.++ .+|++. +.++|||+.+|++.||++.|||||+.||..
T Consensus 446 Le~ip~~la~NaG~d~~~vv~~l~~~-~~~~G~d~~~g~~~dm~~~gI~Dp~~vk~~ 501 (547)
T 1kp8_A 446 MEAPLRQIVLNCGEEPSVVANTVKGG-DGNYGYNAATEEYGNMIDMGILDPTKVTRS 501 (547)
T ss_dssp TTHHHHHHHHHHTSCHHHHHHHHHHS-CTTEEEETTTTEEEETTTTTCEEEHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHhc-CCCEeEeCCCCccccchhcCceechHhHHH
Confidence 9999999999999999999 999875 568999999999999999999999999864
No 3
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=5.2e-100 Score=808.12 Aligned_cols=440 Identities=34% Similarity=0.500 Sum_probs=425.8
Q ss_pred HHHHhhhccccCc----cccccccchhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcC-CCChHHHHHHHHHHHHH
Q 012945 5 ACSLASRVRLINT----TGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADA 79 (453)
Q Consensus 5 ~~~il~~~~~~~p----~~~~~~~~~~~~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~-g~~P~~I~~G~~~a~~~ 79 (453)
..+|||+|++.|| .||++ +++|++||+++||||||+||||++||++++++++ |+||+.|++||++|++.
T Consensus 52 G~tIlk~i~~~hp~en~~Akll------~e~a~~qd~e~GDGTTtvvVLA~~LL~ea~~li~~GihP~~I~~G~~~A~~~ 125 (543)
T 1we3_A 52 GVTVAKEVELEDHLENIGAQLL------KEVASKTNDVAGDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEA 125 (543)
T ss_dssp HHHHHHHCCCSSHHHHHHHHHH------HHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcccCChHHhHHHHHH------HHHHHhhheecCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Confidence 4689999999999 99998 4899999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHhccccccCCHHHHHHHHHHhcCCChhHHHHHHHHHHhhccCCceeeecCCcccceeEEEeeEEEecccCCCcccc
Q 012945 80 VVRNLDCQARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITIFDRKALYNELNFVKGMKLEWGLKSPYFFT 159 (453)
Q Consensus 80 ~~~~L~~~s~~v~~~~~l~~va~~s~~~~~~la~li~~A~~~vg~~~~I~v~~g~~~~d~~~lv~G~~~~~g~~~p~~~~ 159 (453)
++++|+++++|+++.++|.++|++|++ ++.+++++++|+.+++++|.|+|++|++++|++++++|++|++||.||||++
T Consensus 126 a~~~L~~~s~~v~~~~~l~~vA~iS~~-~~~i~~li~dAv~~V~~~g~I~Ve~G~~~~ds~~lv~G~~~dkg~~~p~~vt 204 (543)
T 1we3_A 126 AVEKIKALAIPVEDRKAIEEVATISAN-DPEVGKLIADAMEKVGKEGIITVEESKSLETELKFVEGYQFDKGYISPYFVT 204 (543)
T ss_dssp HHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHHHHHHHHHHTTCTTSEEEEEECSSSSCEEEEECSEEESCCBSSGGGCS
T ss_pred HHHHHHHhcccCCCHHHHHHhhhhhcC-CHHHHHHHHHHHHHhCcCCcEEEecCCccccceEEEcCEEEecCcccccccc
Confidence 999999999999999999999999998 8999999999999999999999999999988779999999999999999999
Q ss_pred cccccceeecCeEEEecccccCCHHHHHHHHHHHHHcCCCEEEEecCcchhhhhhHHhhhccCCcceEEEEccCcccchh
Q 012945 160 HKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRK 239 (453)
Q Consensus 160 ~~~~~~~~l~~p~Ili~d~~i~~~~~i~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~~~~r~ 239 (453)
+|++|..+++||+|+++|++|+++++++++++++.++|+||||++++|+++|+++|+.|++++.++|+|||+|+|+++|+
T Consensus 205 ~~~~m~~~~en~~Ill~d~~Is~~~~l~~~le~i~~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~ 284 (543)
T 1we3_A 205 NPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRK 284 (543)
T ss_dssp BTTTTBCCEEEEEEEEESSCBCCHHHHHHHHHHHHTTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEECSSSHHHHH
T ss_pred CcccCceeecCceEEEECCCcCCHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEeccchhhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhCCEEeeCCCCCCccCCCCCCceeeeEEEEecceEEEEcCCCChhhHHHHHHHHHHHhhhccc----HHHH
Q 012945 240 AIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLK 315 (453)
Q Consensus 240 ~~Le~la~~tG~~i~~~~~~~~~~~~~~~~LG~~~~v~i~~~~~~~~~g~~~~~~i~~r~~~l~~~~~~~~s----~~l~ 315 (453)
++|+|||++|||++++++.|++++++++++||+|++|+++++++++++||+++++++.|+++|+.+++.++| ++|+
T Consensus 285 ~~le~ia~~tGa~ii~~~~g~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~e~l~ 364 (543)
T 1we3_A 285 EMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGGKGKKEDIEARINGIKKELETTDSEYAREKLQ 364 (543)
T ss_dssp HHHHHHHHHHCCCCBCTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHTTCCSHHHHHHHH
T ss_pred HHHHHHHHHhCCceeeccccCCcccCCHHHCCCceEEEEEcCEEEEEcCCCCHHHHHHHHHHHHHHhhccCchhHHHHHH
Confidence 999999999999999998899999999999999999999999999999999999999999999999999888 9999
Q ss_pred HHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHHcCCcCChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHH
Q 012945 316 DRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQN 394 (453)
Q Consensus 316 eRl~~l~g~~~tI~vrG~t~~~l~E~er~i~DAl~~~~~al~~gvVpGGGa~e~~~s~~L~~~~~~-~~~e~~g~~~~a~ 394 (453)
||+++|+|++|||+|||+|+++++|+||++|||||++|+++++|+|||||++|++++.+|++++.. ++++|+|+++|++
T Consensus 365 erlakl~~~~~tI~lrG~te~~l~E~~r~i~DAl~~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~~g~~q~~i~~~a~ 444 (543)
T 1we3_A 365 ERLAKLAGGVAVIRVGAATETELKEKKHRFEDALNATRAAVEEGIVPGGGVTLLRAISAVEELIKKLEGDEATGAKIVRR 444 (543)
T ss_dssp HHHHHHTTCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCccHHHHHHHHHHHHHhhccCchHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999875 8999999999999
Q ss_pred HHHHHHHHHHHhcCCChHHH-HHHHhc-CCCCeeEeCCCCcccchhhcceeeccCcCcc
Q 012945 395 ALKMAAYLIASNAGVDGSVI-DKLLEQ-DSSDLGYNPARGLFFQIKKIKSKKAWCFPMF 451 (453)
Q Consensus 395 AL~~~p~~La~NaG~d~~~v-~~l~~~-~~~~~G~d~~~~~~~dm~~~gi~ep~~~~~~ 451 (453)
||+.||++||+|||+|+.++ .+|++. ++.++|||+.+|++.||++.|||||+.||..
T Consensus 445 ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~ 503 (543)
T 1we3_A 445 ALEEPARQIAENAGYEGSVIVQQILAETKNPRYGFNAATGEFVDMVEAGIVDPAKVTRS 503 (543)
T ss_dssp HTTHHHHHHHHHHTSCHHHHHHHHHHCCSCTTEEEETTTTEEEETTTTTCEEEHHHHHH
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHhcCCCCEEEeCCCCeecccccCCcCccHHHHHH
Confidence 99999999999999999999 999873 3578999999999999999999999999864
No 4
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=5e-101 Score=815.51 Aligned_cols=441 Identities=34% Similarity=0.501 Sum_probs=384.7
Q ss_pred HHHHhhhccccCc----cccccccchhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcC-CCChHHHHHHHHHHHHH
Q 012945 5 ACSLASRVRLINT----TGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADA 79 (453)
Q Consensus 5 ~~~il~~~~~~~p----~~~~~~~~~~~~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~-g~~P~~I~~G~~~a~~~ 79 (453)
..+|||+|++.|| .||++ +++|++||+++||||||+||||++||++++++++ |+||+.|++||++|++.
T Consensus 53 G~tIlk~i~~~hp~en~~Akll------~e~a~~qd~e~GDGTTtvvVLA~~Ll~ea~~li~~GihP~~I~~G~~~A~~~ 126 (545)
T 1iok_A 53 GVSVAKEIELSDKFENMGAQMV------REVASRTNDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAK 126 (545)
T ss_dssp HHHHHHHCCCSSHHHHHHHHHH------HHHHHHGGGGCSTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCChhhHHHHHHH------HHHHHhhccccCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Confidence 4689999999999 99998 4899999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHhccccccCCHHHHHHHHHHhcCCChhHHHHHHHHHHhhccCCceeeecCCcccceeEEEeeEEEecccCCCcccc
Q 012945 80 VVRNLDCQARKITTFEEIAQVGTTAANGDGEIGELIAKVFEKGWENDLITIFDRKALYNELNFVKGMKLEWGLKSPYFFT 159 (453)
Q Consensus 80 ~~~~L~~~s~~v~~~~~l~~va~~s~~~~~~la~li~~A~~~vg~~~~I~v~~g~~~~d~~~lv~G~~~~~g~~~p~~~~ 159 (453)
++++|+++++|+++.++|.++|++|++++++|++++++|+.+++++|.|+|++|++++|++++++|++|++||.||||++
T Consensus 127 a~~~L~~~s~~v~~~e~l~~va~iS~~~~~~i~~li~dAv~~V~~~g~I~Ve~G~~~~ds~~lveG~~~dkg~~~p~~vt 206 (545)
T 1iok_A 127 VVEAIKSAARPVNDSSEVAQVGTISANGESFIGQQIAEAMQRVGNEGVITVEENKGMETEVEVVEGMQFDRGYLSPYFVT 206 (545)
T ss_dssp HHHHHHTTCBCCCSTTTTTHHHHHTTTTCHHHHHHHHHHHHHHCTTSCCCCEECSSSCCEEEEECCEECSCCCSCGGGCC
T ss_pred HHHHHHHhcccCCCHHHHHHHHHhhcCCchhHHHHHHHHHHHhccCCeEEEEeCCccccceEEEecEEEecCcccccccc
Confidence 99999999999988889999999999889999999999999999999999999999988779999999999999999999
Q ss_pred cccccceeecCeEEEecccccCCHHHHHHHHHHHHHcCCCEEEEecCcchhhhhhHHhhhccCCcceEEEEccCcccchh
Q 012945 160 HKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRK 239 (453)
Q Consensus 160 ~~~~~~~~l~~p~Ili~d~~i~~~~~i~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~~~~r~ 239 (453)
+|++|+.+++||+|+++|++|+++++++++++++.++|+||||++++|+++|+++|+.|++++.++|+|||+|+|+++|+
T Consensus 207 ~~~~m~~~~en~~Ill~d~~I~~~~~l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~ 286 (545)
T 1iok_A 207 NADKMIAELEDAYILLHEKKLSSLQPMVPLLESVIQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRK 286 (545)
T ss_dssp CSSSSCEEEEEEEEEECSSCBCCCCC-----------CCCCEEEESCBC-----------------CEEEECSCCTTHHH
T ss_pred CcccCceeecCCeEEEEcCCcCCHHHHHHHHHHHHhcCCCEEEECCCcCHHHHHHHHHccccccceeEEEecchhhhccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhCCEEeeCCCCCCccCCCCCCceeeeEEEEecceEEEEcCCCChhhHHHHHHHHHHHhhhccc----HHHH
Q 012945 240 AIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTS----DKLK 315 (453)
Q Consensus 240 ~~Le~la~~tG~~i~~~~~~~~~~~~~~~~LG~~~~v~i~~~~~~~~~g~~~~~~i~~r~~~l~~~~~~~~s----~~l~ 315 (453)
++|+|||++|||++++++.|++++++++++||+|++|+++++++++++||+++++++.|+++++.+++.++| ++|+
T Consensus 287 ~~le~ia~~tGa~ii~~~~~~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~ 366 (545)
T 1iok_A 287 AMLQDIAILTGGQVISEDLGMKLENVTIDMLGRAKKVSINKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQ 366 (545)
T ss_dssp HHHHHHHHHHTC---------------CTTSEEEEEEEECSSCEEEESCCCCHHHHHHHHHHHHHHHTTCCCSSHHHHHH
T ss_pred HHHHHHHHhcCCeeecccccCCcccCCHHHcCcCcEEEEecCEEEEEeCCCCHHHHHHHHHHHHHHHhccCchhhHHHHH
Confidence 999999999999999998899999999999999999999999999999999999999999999999999888 9999
Q ss_pred HHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHHcCCcCChhHHHHHHHHHHHhhcCCChhHHHHHHHHHHH
Q 012945 316 DRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEGIVPGSGVALLYASKELDKLQTTNSDQKIGVQIVQNA 395 (453)
Q Consensus 316 eRl~~l~g~~~tI~vrG~t~~~l~E~er~i~DAl~~~~~al~~gvVpGGGa~e~~~s~~L~~~~~~~~~e~~g~~~~a~A 395 (453)
||+++|+|++|||+|||+|+++++|+||++|||||++|+++++|+|||||++|++++++|++++..++++|+|+++|++|
T Consensus 367 erlakl~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~g~~q~~i~~~a~A 446 (545)
T 1iok_A 367 ERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQEGIVVGGGVALVQGAKVLEGLSGANSDQDAGIAIIRRA 446 (545)
T ss_dssp HHHHTTSSCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHHHHHGGGGGSCCCSSHHHHHHHHHHHHH
T ss_pred HHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHHHhccCchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998876689999999999999
Q ss_pred HHHHHHHHHHhcCCChHHH-HHHHhcCCCCeeEeCCCCcccchhhcceeeccCcCcc
Q 012945 396 LKMAAYLIASNAGVDGSVI-DKLLEQDSSDLGYNPARGLFFQIKKIKSKKAWCFPMF 451 (453)
Q Consensus 396 L~~~p~~La~NaG~d~~~v-~~l~~~~~~~~G~d~~~~~~~dm~~~gi~ep~~~~~~ 451 (453)
|+.||++||+|||+|+.++ .+|++..+.++|||+.+|++.||++.|||||+.||..
T Consensus 447 Le~ip~~La~NaG~d~~~vv~~l~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~ 503 (545)
T 1iok_A 447 LEAPMRQIAENAGVDGAVVAGKVRESSDKAFGFNAQTEEYGDMFKFGVIDPAKVVRT 503 (545)
T ss_dssp TTHHHHHHHHHHTSCHHHHHHHHHSCCSTTEEEETTTTEEEEHHHHTCEEEHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHhhcCCCeeEeCCCCcccchHhcCcEEccHHHHH
Confidence 9999999999999999999 9998754578999999999999999999999999864
No 5
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=2.5e-85 Score=699.72 Aligned_cols=416 Identities=12% Similarity=0.131 Sum_probs=342.5
Q ss_pred HHHHhhhccccCccccccccchhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhh-cC-CCChHHHHHHHHHHHHHHHH
Q 012945 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKA-LG-RANLTGLTQGFRMAADAVVR 82 (453)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~~~~~~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~l-i~-g~~P~~I~~G~~~a~~~~~~ 82 (453)
..+|||+|++.||+||++ +++|++||+++||||||+||||++||++|+++ ++ |+||+.|++||++|++.+++
T Consensus 61 G~TIlk~i~~~hP~Akll------~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~l~l~~GihP~~I~~G~~~A~~~a~~ 134 (590)
T 3p9d_C 61 GHAILREIDVAHPAAKSM------LELSRTQDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALE 134 (590)
T ss_dssp HHHHHHHSCCCCHHHHTH------HHHTTTHHHHCSSCHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCHHHHHH------HHHHHhhhhhhCCCccchHHHHHHHHhhhHHhhhhcCCCHHHHHHHHHHHHHHHHH
Confidence 468999999999999998 48999999999999999999999999999999 99 99999999999999999999
Q ss_pred HHhccccccC--CHHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccCCc----------------eeee--cCCcc
Q 012945 83 NLDCQARKIT--TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWENDL----------------ITIF--DRKAL 136 (453)
Q Consensus 83 ~L~~~s~~v~--~~~~l~~va~~s~~~------~~~la~li~~A~~~vg~~~~----------------I~v~--~g~~~ 136 (453)
+|+++++|++ +.+.|.++|+||.++ ++.|++++++|+.++++++. |+|+ .|++.
T Consensus 135 ~L~~~s~~v~~~~~e~L~~vA~tslsSK~~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~ 214 (590)
T 3p9d_C 135 VIKQVSKPVDVENDAAMKKLIQASIGTKYVIHWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDV 214 (590)
T ss_dssp HHHHHCCTTTTCCTHHHHHHHTTTSTTSTTGGGHHHHHHHHHHHHTTSTTCC-----------CCCSSSSCEEEESSCCG
T ss_pred HHHHHhhccccCCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHhcccccCccccccccccchhhceEEEEecCCCc
Confidence 9999999987 368899999877542 67899999999999987642 4444 47766
Q ss_pred cceeEEEeeEEEecccCCCcccccccccceeecCeEEEecccc-------------cCCHHHHHHHH-----------HH
Q 012945 137 YNELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVIRQAS-----------LP 192 (453)
Q Consensus 137 ~d~~~lv~G~~~~~g~~~p~~~~~~~~~~~~l~~p~Ili~d~~-------------i~~~~~i~~~l-----------e~ 192 (453)
. ++++++||+|++++.+|.| +.+++||+|+++|++ |++++++.+++ ++
T Consensus 215 ~-ds~lv~Gmvfdk~~~~~~m-------~~~~en~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~~l~~~vek 286 (590)
T 3p9d_C 215 L-DSRVLKGVLLNKDVVHPKM-------SRHIENPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQ 286 (590)
T ss_dssp G-GCBCCSSEEECCCCSCTTS-------CSCEESCCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHHHHHHHHHHHH
T ss_pred c-cceeeeEEEEecccCCCCC-------cceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4 6899999999999888755 357999999999984 44566665554 67
Q ss_pred HHHcCCCEEEEecCcchhhhhhHHhhhccCCcceEEEEccCcccchhhHHHHHHHHhCCEEeeCCCCCCccCCCCCCcee
Q 012945 193 CMMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGS 272 (453)
Q Consensus 193 i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~~~~r~~~Le~la~~tG~~i~~~~~~~~~~~~~~~~LG~ 272 (453)
+.+.|.+|||+.++|+++|+++|..++ |++++ +.++.+|+|||++|||+++++ ++++++++||+
T Consensus 287 I~~~g~~vII~e~~I~d~Al~~L~k~~------I~av~-----~~~k~~le~ia~~TGa~iis~-----l~~~~~~~LG~ 350 (590)
T 3p9d_C 287 ILAVRPTLVITEKGVSDLAQHYLLKGG------CSVLR-----RVKKSDNNRIARVTGATIVNR-----VEDLKESDVGT 350 (590)
T ss_dssp HHTTCCSEECCSSCCCTHHHHHHHHTT------CCCCC-----CCCHHHHHHHHHHHTCCCCSC-----STTCCTTSCBC
T ss_pred HHhcCCcEEEecCCcCHHHHHHHHhcc------ceeec-----cCCHHHHHHHHHHhCCceeec-----ccCCCHHHhCC
Confidence 888886666656679999999998763 56655 577889999999999999996 89999999999
Q ss_pred -eeEEE---EecceEEEEcCCCChhh--------------------------HHHHHHHHHHHhhhcccHHHHHHHhhhc
Q 012945 273 -CKRVI---ATMDNVVIIGGSGELVD--------------------------IQERCEQLRSTIKLSTSDKLKDRLAKLS 322 (453)
Q Consensus 273 -~~~v~---i~~~~~~~~~g~~~~~~--------------------------i~~r~~~l~~~~~~~~s~~l~eRl~~l~ 322 (453)
|++|+ +++++|++|+||+++++ |+.|+++++++++.++|+- .+++++|+
T Consensus 351 ~a~~v~~~~ig~d~~~~i~g~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~i~~r~~~i~~~~~~~~~~~-~~~~~~l~ 429 (590)
T 3p9d_C 351 NCGLFKVEMIGDEYFSFLDNCKEPGSGSGWSHPQFEKGSGKRRWKKNFIAVSAANRFKKISSSGALGSGHH-HHHHHHGS 429 (590)
T ss_dssp CCSEEECCEETTEECEEECC----------------------------------------------------------CC
T ss_pred cCCEEEEEEEcCcEEEEEeCCCCccccccccccccccccchhhhhcchhhHHHHHHHHHHHHHHhccCCHH-HHHHHhhc
Confidence 99996 67899999999999888 9999999999999888732 25579999
Q ss_pred CCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHHc-CCcCChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHH
Q 012945 323 GGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE-GIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAA 400 (453)
Q Consensus 323 g~~~tI~vrG~t~~~l~E~er~i~DAl~~~~~al~~-gvVpGGGa~e~~~s~~L~~~~~~-~~~e~~g~~~~a~AL~~~p 400 (453)
||+|||+|||+|+++++|+||+++||||++|+++++ |+|||||++|+++|++|++++.. ++++|+|+++|++||+.||
T Consensus 430 ggv~tI~lrg~te~~l~E~kr~i~DAl~a~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip 509 (590)
T 3p9d_C 430 GKACTIMLRGGSKDILNEIDRNLQDAMAVARNVMLSPSLSPGGGATEMAVSVKLAEKAKQLEGIQQWPYQAVADAMECIP 509 (590)
T ss_dssp CSCCCEEEECSSTTTHHHHHHHHHHHHHHHHHHHHCCCEECTTTHHHHHHHHHHHHHHHHSCSTTHHHHHHHHHHTTHHH
T ss_pred CCeeEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEeCccHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999 59999999999999999998754 8999999999999999999
Q ss_pred HHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCCcccchhhcceeeccCcCcc
Q 012945 401 YLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARGLFFQIKKIKSKKAWCFPMF 451 (453)
Q Consensus 401 ~~La~NaG~d~~~v-~~l~~~---~~~~~G~d~~~~~~~dm~~~gi~ep~~~~~~ 451 (453)
++||+|||+|+.++ .+|++. +++++|||+.+|++.||++.|||||+.||..
T Consensus 510 ~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~ 564 (590)
T 3p9d_C 510 RTLIQNAGGDPIRLLSQLRAKHAQGNFTTGIDGDKGKIVDMVSYGIWEPEVIKQQ 564 (590)
T ss_dssp HHHHHTTCSCHHHHHHHHHHHHTTSCTTCBCCTTSSSCBCTTTTTCCEEHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHhcCCCCEeEeCCCCeEeehHHcCCeEcHHHHHH
Confidence 99999999999999 999873 5678999999999999999999999999864
No 6
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.7e-83 Score=676.60 Aligned_cols=389 Identities=13% Similarity=0.126 Sum_probs=350.6
Q ss_pred HHHHhhhccccCccccccccchhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012945 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (453)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~~~~~~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~-g~~P~~I~~G~~~a~~~~~~~ 83 (453)
..+|||+|++.||+||++ +++|++||+++||||||+||||++||++|+++++ |+||+.|++||++|++.++++
T Consensus 53 G~tIlk~i~v~hP~Akll------~e~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 126 (515)
T 3iyg_H 53 GATILKLLDVVHPAAKTL------VDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNK 126 (515)
T ss_pred HHHHHHHccCCCHHHHHH------HHHHHHhhceeCcchhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999998 4899999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--C----HHHHHHHHHHhcC------CChhHHHHHHHHHHhhccC---Cceeeec--CCcccceeEEEeeE
Q 012945 84 LDCQARKIT--T----FEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN---DLITIFD--RKALYNELNFVKGM 146 (453)
Q Consensus 84 L~~~s~~v~--~----~~~l~~va~~s~~------~~~~la~li~~A~~~vg~~---~~I~v~~--g~~~~d~~~lv~G~ 146 (453)
|+++++|++ + .+.|.++|+||++ +++.|++++++|+.+++.+ +.|+|+. |++. +++++++||
T Consensus 127 L~~~a~~v~~~~~~~~~~~L~~va~tsl~sK~~s~~~~~i~~livdAv~~V~~~~d~~~I~V~k~~Gg~~-~ds~lv~G~ 205 (515)
T 3iyg_H 127 IKEIAVTVKKEDKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLDDLLQLKMIGIKKVQGGAL-EESQLVAGV 205 (515)
T ss_pred HHHhhcccccCChHHHHHHHHHHHHHHhcCCcccccHHHHHHHHHHHHHHhcccCCcceEEEEecCCCCc-cceEEEeee
Confidence 999999984 5 5677999988764 3678999999999999876 6788874 5555 579999999
Q ss_pred EEecccCCCcccccccccceeecCeEEEecccc-------------cCCHHHH-----------HHHHHHHHHcCCCEEE
Q 012945 147 KLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVI-----------RQASLPCMMQGQSLLV 202 (453)
Q Consensus 147 ~~~~g~~~p~~~~~~~~~~~~l~~p~Ili~d~~-------------i~~~~~i-----------~~~le~i~~~~~~lvi 202 (453)
+|+++|.||||+++|+ +++||+|+++|++ |++++++ .++++++.+.|+||||
T Consensus 206 ~~dk~~~~p~~~~~p~----~~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi 281 (515)
T 3iyg_H 206 AFKKTFSYAGFEMQPK----KYHNPMIALLNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVL 281 (515)
T ss_pred EEecCccCcccccCCc----cccccEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEE
Confidence 9999999999987776 7999999999984 6677665 6678999999999999
Q ss_pred EecCcchhhhhhHHhhhccCCcceEEEEccCcccchhhHHHHHHHHhCCEEeeCCCCCCccCCCCCCceeeeEEEEe---
Q 012945 203 VAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT--- 279 (453)
Q Consensus 203 i~~~i~~~al~~l~~n~~~~~~~i~avk~~~~~~~r~~~Le~la~~tG~~i~~~~~~~~~~~~~~~~LG~~~~v~i~--- 279 (453)
++++|++.++++|.. .+|++++ +.++.+|+|||++|||+++++ ++++++++||+|++|++.
T Consensus 282 ~~~~I~dla~~~l~~------~gI~~v~-----~~~k~~leria~~tGa~ii~~-----l~~~~~~~LG~a~~v~~~~ig 345 (515)
T 3iyg_H 282 SKLPIGDVATQYFAD------RDMFCAG-----RVPEEDLKRTMMACGGSIQTS-----VNALSSDVLGRCQVFEETQIG 345 (515)
T ss_pred ECCcccHHHHHHHHH------cCCcccc-----cccHHHHHHHHHHhCCEEeec-----cccCCHHHCCcccEEEEEEEc
Confidence 999999988877753 2466776 467789999999999999996 899999999999999854
Q ss_pred cceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHHc-
Q 012945 280 MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE- 358 (453)
Q Consensus 280 ~~~~~~~~g~~~~~~i~~r~~~l~~~~~~~~s~~l~eRl~~l~g~~~tI~vrG~t~~~l~E~er~i~DAl~~~~~al~~- 358 (453)
++++++|+||+++ +.|||+|||+|+++++|+||++|||||++|+++++
T Consensus 346 ~~~~~~i~g~~~~-------------------------------~~~tI~lrG~t~~~l~E~kr~i~DAl~~~r~~v~~~ 394 (515)
T 3iyg_H 346 GERYNFFTGCPKA-------------------------------KTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKND 394 (515)
T ss_pred CeEEEEEecCCCC-------------------------------ceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 7899999998775 35899999999999999999999999999999998
Q ss_pred CCcCChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCCc
Q 012945 359 GIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARGL 433 (453)
Q Consensus 359 gvVpGGGa~e~~~s~~L~~~~~~-~~~e~~g~~~~a~AL~~~p~~La~NaG~d~~~v-~~l~~~---~~~~~G~d~~~~~ 433 (453)
++|||||++|+++|++|++++.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+|+
T Consensus 395 ~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~ 474 (515)
T 3iyg_H 395 SVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGMWYGVDINTED 474 (515)
T ss_pred CeecCCcHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccCCCeeEeCCCCc
Confidence 69999999999999999999765 899999999999999999999999999999999 999873 4567999999999
Q ss_pred ccchhhcceeeccCcCcc
Q 012945 434 FFQIKKIKSKKAWCFPMF 451 (453)
Q Consensus 434 ~~dm~~~gi~ep~~~~~~ 451 (453)
+.||++.|||||+.||..
T Consensus 475 ~~dm~~~gI~dp~~vk~~ 492 (515)
T 3iyg_H 475 IADNFEAFVWEPAMVRIN 492 (515)
T ss_pred ccccHhccCEECHHHHHH
Confidence 999999999999999864
No 7
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=2.6e-83 Score=682.01 Aligned_cols=386 Identities=17% Similarity=0.238 Sum_probs=352.9
Q ss_pred HHHHhhhccccCccccccccchhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012945 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (453)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~~~~~~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~-g~~P~~I~~G~~~a~~~~~~~ 83 (453)
..+|||+|++.||+||++ +++|++||+++||||||+||||++||++|+++++ |+||+.|++||++|++.++++
T Consensus 72 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 145 (553)
T 3ko1_A 72 GATILDKMDLQHPAAKLL------VQIAKGQDEETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISGYKKAEEVALQT 145 (553)
T ss_dssp HHHHHHSSCCCSHHHHHH------HHHHHTCSSSSSTTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhhhccChhHHHH------HHHhhCCcccccCCceeEEEehHHHHHhHHHHHhcCCCceEEehhhhHHHHHHHHH
Confidence 468999999999999998 4899999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--CHHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccC--Cc-------eeee--cCCcccceeEEEe
Q 012945 84 LDCQARKIT--TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN--DL-------ITIF--DRKALYNELNFVK 144 (453)
Q Consensus 84 L~~~s~~v~--~~~~l~~va~~s~~~------~~~la~li~~A~~~vg~~--~~-------I~v~--~g~~~~d~~~lv~ 144 (453)
|+++++|++ +.+.|.++|++|+++ +++|++++++|+.+++++ |. |+|+ .|++. +++++++
T Consensus 146 L~~~s~~v~~~d~e~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~G~~~~dl~~I~I~k~~Gg~~-~ds~lv~ 224 (553)
T 3ko1_A 146 IQELAQTVSINDTDLLRKIAMTSLSSKAVAGAREYIADIVVKAVTQVAELRGDKWYVDLDNIQIVKKAGGSI-NDTQLVY 224 (553)
T ss_dssp HHTTCEECCTTCHHHHHHHHHHHHTTSSCCTTHHHHHHHHHHHHHHHCCCTTSSCCCCGGGEEEEECCCSCG-GGCEEES
T ss_pred HHHhcCCCCCCcHHHHHHHHHHHhhHHhhhhHHHHHHHHHHHHHHHHHHhcCCceEEechhHHHHHHhCCcc-ccceeeE
Confidence 999999987 789999999999875 678999999999999875 65 7776 45555 5799999
Q ss_pred eEEEecccCCCcccccccccceeecCeEEEeccc-------------ccCCHHH-----------HHHHHHHHHHcCCCE
Q 012945 145 GMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDT-------------KISNSNV-----------IRQASLPCMMQGQSL 200 (453)
Q Consensus 145 G~~~~~g~~~p~~~~~~~~~~~~l~~p~Ili~d~-------------~i~~~~~-----------i~~~le~i~~~~~~l 200 (453)
||+|+++|.||||+ .+++||+|+++|+ +|+++++ +.++++++.+.|+||
T Consensus 225 G~v~dk~~~~~~m~-------~~ien~kIll~d~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~v 297 (553)
T 3ko1_A 225 GIVVDKEVVHPGMP-------KRLENAKIALIDASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKILATGANV 297 (553)
T ss_dssp EEEECSCBSCTTSC-------SCCBSCEEEEECSCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSE
T ss_pred EEEecccccCCCCc-------cccccceEEEecCcccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceE
Confidence 99999999999984 3689999999998 4667766 567788999999999
Q ss_pred EEEecCcchhhhhhHHhhhccCCcceEEEEccCcccchhhHHHHHHHHhCCEEeeCCCCCCccCCCCCCceeeeEEEEe-
Q 012945 201 LVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT- 279 (453)
Q Consensus 201 vii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~~~~r~~~Le~la~~tG~~i~~~~~~~~~~~~~~~~LG~~~~v~i~- 279 (453)
||++++|+++++++|..+ +|++|++ .++.+|+|||++|||+++++ ++++++++||+|++|++.
T Consensus 298 vI~~~~I~~~al~~L~~~------gI~~v~~-----v~k~~leria~~tGa~ivs~-----l~~l~~~~LG~a~~v~~~~ 361 (553)
T 3ko1_A 298 IICQKGIDEVAQSYLAKK------GVLAVRR-----AKKSDLEKLARATGGRVVSN-----IDEISEQDLGYASLIEERK 361 (553)
T ss_dssp EECSSCBCSHHHHHHHHH------TCEEECC-----CCHHHHHHHHTTTTCCEESC-----GGGCCSSSSEECSEEECCC
T ss_pred EEeccChHHHHHHHHHhc------chhhhhh-----hhhhhHHHHHHhhCCeeecc-----cccCChhhcchHHHHHHhh
Confidence 999999999999999853 4788885 46788999999999999996 899999999999999864
Q ss_pred --cceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHH
Q 012945 280 --MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKE 357 (453)
Q Consensus 280 --~~~~~~~~g~~~~~~i~~r~~~l~~~~~~~~s~~l~eRl~~l~g~~~tI~vrG~t~~~l~E~er~i~DAl~~~~~al~ 357 (453)
+++++|++||++++ .|||+|||+|+++++|+||++|||||++|++++
T Consensus 362 ig~d~~~~i~g~~~~~-------------------------------~~TI~lrG~te~~l~E~er~l~DAl~~~r~av~ 410 (553)
T 3ko1_A 362 VGEDKMVFVEGAKNPK-------------------------------SISILIRGGLERLVDETERALRDALGTVADVIK 410 (553)
T ss_dssp CSSSCCEEEESCSSSS-------------------------------CEEEEECCSSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcceEEEeccCCCCc-------------------------------eEEEeeeccHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 88999999998764 489999999999999999999999999999999
Q ss_pred cC-CcCChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CC-CCeeEeCC
Q 012945 358 EG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DS-SDLGYNPA 430 (453)
Q Consensus 358 ~g-vVpGGGa~e~~~s~~L~~~~~~-~~~e~~g~~~~a~AL~~~p~~La~NaG~d~~~v-~~l~~~---~~-~~~G~d~~ 430 (453)
+| +|||||++|++++++|++++.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++ .++|||+.
T Consensus 411 ~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~ 490 (553)
T 3ko1_A 411 DGRAIAGGGAVEIEIAKKLRKYAPQVGGKEQLAVEAYANALESLVSILIENAGFDPIDLLMKLRSTHENENNKWYGIDLY 490 (553)
T ss_dssp HCEEEETTTHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHTTCSGGGTTEEEETT
T ss_pred cCceecCCceeEeHHHHHHHHhccccCChhHhHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHhhCcCCceEeEEee
Confidence 99 9999999999999999998865 899999999999999999999999999999999 999874 23 68999999
Q ss_pred CCcccchhhcceeeccCcCcc
Q 012945 431 RGLFFQIKKIKSKKAWCFPMF 451 (453)
Q Consensus 431 ~~~~~dm~~~gi~ep~~~~~~ 451 (453)
+|++.||++.|||||+.||..
T Consensus 491 ~g~~~d~~~~gI~dp~~vk~~ 511 (553)
T 3ko1_A 491 AGQPVDMWQKGVIEPALVKMN 511 (553)
T ss_dssp TTEEEESGGGSCEEETTHHHH
T ss_pred cCCchHHHHhCccchhhhhhh
Confidence 999999999999999999864
No 8
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=5.6e-83 Score=675.40 Aligned_cols=385 Identities=16% Similarity=0.199 Sum_probs=349.9
Q ss_pred HHHHhhhccccCccccccccchhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012945 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (453)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~~~~~~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~-g~~P~~I~~G~~~a~~~~~~~ 83 (453)
..+|||+|++.||+||++ +++|++||+++||||||+||||++||++|+++++ |+||+.|++||++|++.++++
T Consensus 54 G~tIlk~i~v~hp~Akll------~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 127 (513)
T 3iyg_B 54 GATILKNIGVDNPAAKVL------VDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQA 127 (513)
T ss_pred HHHHHHHccccCHHHHHH------HHHHHHhhhhhCCChhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999998 4899999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC-----CHHHHHHHHHHhcC------CChhHHHHHHHHHHhhccC---Cceeeec--CCcccceeEEEeeEE
Q 012945 84 LDCQARKIT-----TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN---DLITIFD--RKALYNELNFVKGMK 147 (453)
Q Consensus 84 L~~~s~~v~-----~~~~l~~va~~s~~------~~~~la~li~~A~~~vg~~---~~I~v~~--g~~~~d~~~lv~G~~ 147 (453)
|+++++|++ +.+.|.++|+||.+ ++++|++++++|+.+++++ +.|+|+. |++. +++++++||+
T Consensus 128 L~~~s~~v~~~~~~~~~~l~~va~tslssK~~~~~~~~i~~livdAv~~V~~~~d~~~I~V~ki~gg~~-~ds~lv~G~v 206 (513)
T 3iyg_B 128 LLNSAVDHGSDEVKFRQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRLKGSGNLEAIHVIKKLGGSL-ADSYLDEGFL 206 (513)
T ss_pred HHHhCcCcccccccCHHHHHHHHHhhhcccccccchHHHHHHHHHHHHHhcccCCcCeEEEEEeCCCCc-cceeEEeeEE
Confidence 999999987 56889999987764 3578999999999999887 7788864 6555 4689999999
Q ss_pred EecccCCCcccccccccceeecCeEEEeccc--------------ccCCHHHHHH-----------HHHHHHHcCCCEEE
Q 012945 148 LEWGLKSPYFFTHKNKKECVLDGALVLIYDT--------------KISNSNVIRQ-----------ASLPCMMQGQSLLV 202 (453)
Q Consensus 148 ~~~g~~~p~~~~~~~~~~~~l~~p~Ili~d~--------------~i~~~~~i~~-----------~le~i~~~~~~lvi 202 (453)
|+++|.+| | +.+++||+|+++|+ +|++++++.+ +++++.++|+||||
T Consensus 207 ~dk~~~~~-m-------~~~~en~kIll~~~~Le~~k~e~~~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi 278 (513)
T 3iyg_B 207 LDKKIGVN-Q-------PKRIENAKILIANTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFI 278 (513)
T ss_pred EeccccCC-C-------ceeecCceEEEEcCCcccccccccCCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 99999988 4 34799999999998 4667776654 68889999999999
Q ss_pred EecCcchhhhhhHHhhhccCCcceEEEEccCcccchhhHHHHHHHHhCCEEeeCCCCCCccCCCCCCceeeeEEE---Ee
Q 012945 203 VAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI---AT 279 (453)
Q Consensus 203 i~~~i~~~al~~l~~n~~~~~~~i~avk~~~~~~~r~~~Le~la~~tG~~i~~~~~~~~~~~~~~~~LG~~~~v~---i~ 279 (453)
++++|+++++++|.. .+|++||+|++ .+|+|||++|||+++++ ++++++++||+|++|+ ++
T Consensus 279 ~~~~I~~~al~~L~~------~~I~av~~~~~-----~~le~ia~~tGa~ii~~-----l~~l~~~~LG~a~~v~~~~ig 342 (513)
T 3iyg_B 279 NRQLIYNYPEQLFGA------AGVMAIEHADF-----VGVERLALVTGGEIAST-----FDHPELVKLGSCKLIEEVMIG 342 (513)
T ss_pred EcCCccHHHHHHHHH------cCceEEecCCH-----HHHHHHHHHhCCEEecc-----cccCCHhHCCcccEEEEEEEC
Confidence 999999999998885 36899999875 45999999999999996 8999999999999997 78
Q ss_pred cceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHHc-
Q 012945 280 MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE- 358 (453)
Q Consensus 280 ~~~~~~~~g~~~~~~i~~r~~~l~~~~~~~~s~~l~eRl~~l~g~~~tI~vrG~t~~~l~E~er~i~DAl~~~~~al~~- 358 (453)
+++++++.||+++ ++|||+|||+|+++++|+||++|||||++|+++++
T Consensus 343 ~~~~~~~~g~~~~-------------------------------~~~tI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~ 391 (513)
T 3iyg_B 343 EDKLIHFSGVALG-------------------------------EACTIVLRGATQQILDEAERSLHDALCVLAQTVKDS 391 (513)
T ss_pred CeEEEEEecCCCC-------------------------------ceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 8999999998654 57999999999999999999999999999999998
Q ss_pred CCcCChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCCc
Q 012945 359 GIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARGL 433 (453)
Q Consensus 359 gvVpGGGa~e~~~s~~L~~~~~~-~~~e~~g~~~~a~AL~~~p~~La~NaG~d~~~v-~~l~~~---~~~~~G~d~~~~~ 433 (453)
++|||||++|++++++|++++.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+|+
T Consensus 392 ~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~ 471 (513)
T 3iyg_B 392 RTVYGGGCSEMLMAHAVTQLASRTPGKEAVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGKTTAGLDMKEGT 471 (513)
T ss_pred cEEeCCcHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeecCCCCC
Confidence 69999999999999999999875 899999999999999999999999999999999 999873 4568999999999
Q ss_pred ccchhhcceeeccCcCcc
Q 012945 434 FFQIKKIKSKKAWCFPMF 451 (453)
Q Consensus 434 ~~dm~~~gi~ep~~~~~~ 451 (453)
+.||++.|||||+.||..
T Consensus 472 ~~d~~~~gI~dp~~vk~~ 489 (513)
T 3iyg_B 472 IGDMSVLGITESFQVKRQ 489 (513)
T ss_pred ccchHhccCEecHHHHHH
Confidence 999999999999999864
No 9
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=2.8e-83 Score=681.49 Aligned_cols=386 Identities=17% Similarity=0.207 Sum_probs=352.3
Q ss_pred HHHHhhhccccCccccccccchhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012945 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (453)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~~~~~~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~-g~~P~~I~~G~~~a~~~~~~~ 83 (453)
..+|||+|++.||+||++ +++|++||+++||||||+||||++||++|+++++ |+||+.|++||++|++.++++
T Consensus 61 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~~~ 134 (543)
T 3ruv_A 61 GVTILREMSVEHPAAKML------IEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQEL 134 (543)
T ss_dssp HHHHHHHSCCCCHHHHHH------HHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCcCHHHHHH------HHHHHHHHhhhCCCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999998 4899999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--CHHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccC-Cc-----eeee--cCCcccceeEEEeeEE
Q 012945 84 LDCQARKIT--TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN-DL-----ITIF--DRKALYNELNFVKGMK 147 (453)
Q Consensus 84 L~~~s~~v~--~~~~l~~va~~s~~~------~~~la~li~~A~~~vg~~-~~-----I~v~--~g~~~~d~~~lv~G~~ 147 (453)
|+++++|++ +.+.|.++|+||+++ +++|++++++|+.+++++ |. |+|+ .|++. +++++++|++
T Consensus 135 L~~~s~~v~~~d~~~L~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~g~~dl~~I~V~k~~Gg~~-~ds~lv~G~v 213 (543)
T 3ruv_A 135 LKTIACEVGAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASI-DDTELIKGVL 213 (543)
T ss_dssp HHHHCEECCTTCHHHHHHHHHHHHHHTCGGGCCHHHHHHHHHHHHHHCCTTSCCCGGGEEEEEEECSCG-GGCEEESSEE
T ss_pred HHHhhCCCCCCCHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHhhccCCCcccceEEEEEcCCCCc-ccceeecceE
Confidence 999999987 789999999999763 689999999999999876 64 7776 56565 5799999999
Q ss_pred EecccCCCcccccccccceeecCeEEEecccc-------------cCCHHH-----------HHHHHHHHHHcCCCEEEE
Q 012945 148 LEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNV-----------IRQASLPCMMQGQSLLVV 203 (453)
Q Consensus 148 ~~~g~~~p~~~~~~~~~~~~l~~p~Ili~d~~-------------i~~~~~-----------i~~~le~i~~~~~~lvii 203 (453)
|+++|.||||+ .+++||+|+++|++ |+++++ +.++++++.+.|+||||+
T Consensus 214 ~dk~~~~~~m~-------~~~~n~kIll~~~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~ 286 (543)
T 3ruv_A 214 VDKERVSAQMP-------KKVTDAKIALLNCAIEIKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFC 286 (543)
T ss_dssp ESCCCSCTTSC-------SEEEEEEEEEESSCBSCCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred EeccccCcccc-------ccccCcEEEEEcccccccccccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 99999999984 37899999999984 556555 667789999999999999
Q ss_pred ecCcchhhhhhHHhhhccCCcceEEEEccCcccchhhHHHHHHHHhCCEEeeCCCCCCccCCCCCCceeeeEEEEe---c
Q 012945 204 AEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT---M 280 (453)
Q Consensus 204 ~~~i~~~al~~l~~n~~~~~~~i~avk~~~~~~~r~~~Le~la~~tG~~i~~~~~~~~~~~~~~~~LG~~~~v~i~---~ 280 (453)
+++|+++++++|..+ +|++|++ .++.+|+|||++|||+++++ ++++++++||+|++|++. +
T Consensus 287 ~~~I~~~al~~L~~~------gI~~v~~-----v~k~~le~ia~~tGa~iis~-----l~~l~~~~LG~a~~v~~~~ig~ 350 (543)
T 3ruv_A 287 QKGIDDLAQHYLAKE------GIVAARR-----VKKSDMEKLAKATGANVIAA-----IAALSAQDLGDAGLVEERKISG 350 (543)
T ss_dssp SSCBCHHHHHHHHHT------TCEEECS-----CCHHHHHHHHHHHCCCEESC-----GGGCCGGGCEEEEEEEEEEETT
T ss_pred eCCccHHHHHHHHHc------CcEEEee-----CCHHHHHHHHHHhCCceecc-----cccCCHHHCCcccEEEEEEeCC
Confidence 999999999999843 5788885 56788999999999999996 899999999999999865 8
Q ss_pred ceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHHcC-
Q 012945 281 DNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG- 359 (453)
Q Consensus 281 ~~~~~~~g~~~~~~i~~r~~~l~~~~~~~~s~~l~eRl~~l~g~~~tI~vrG~t~~~l~E~er~i~DAl~~~~~al~~g- 359 (453)
++++|++||++++ .|||+|||+|+++++|+||++|||||++|+++++|
T Consensus 351 ~~~~~i~g~~~~~-------------------------------~~TI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~ 399 (543)
T 3ruv_A 351 DSMIFVEECKHPK-------------------------------AVTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGR 399 (543)
T ss_dssp EEEEEEECCSSCS-------------------------------SEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCE
T ss_pred ceEEEEECCCCCc-------------------------------eeEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 8999999998764 48999999999999999999999999999999999
Q ss_pred CcCChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc----CCCCeeEeCCCCc
Q 012945 360 IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ----DSSDLGYNPARGL 433 (453)
Q Consensus 360 vVpGGGa~e~~~s~~L~~~~~~-~~~e~~g~~~~a~AL~~~p~~La~NaG~d~~~v-~~l~~~----~~~~~G~d~~~~~ 433 (453)
+|||||++|+++|.+|++++.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+|+
T Consensus 400 iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~ 479 (543)
T 3ruv_A 400 IVSGGGSTEVELSMKLREYAEGISGREQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFTGA 479 (543)
T ss_dssp EEETTTHHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHHHHHHTTTCCTTEEECTTTCS
T ss_pred eecCCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCceeeeeCCCCc
Confidence 9999999999999999999764 899999999999999999999999999999999 999763 3478999999999
Q ss_pred ccchhhcceeeccCcCcc
Q 012945 434 FFQIKKIKSKKAWCFPMF 451 (453)
Q Consensus 434 ~~dm~~~gi~ep~~~~~~ 451 (453)
+.||++.|||||+.||..
T Consensus 480 ~~dm~~~gI~dp~~vk~~ 497 (543)
T 3ruv_A 480 VEDMCENGVVEPLRVKTQ 497 (543)
T ss_dssp EEETTTTTCEEEHHHHHH
T ss_pred cccHHHcCCEecHHHHHH
Confidence 999999999999999864
No 10
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=3.7e-83 Score=674.86 Aligned_cols=386 Identities=16% Similarity=0.213 Sum_probs=323.1
Q ss_pred HHHHhhhccccCccccccccchhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012945 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (453)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~~~~~~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~-g~~P~~I~~G~~~a~~~~~~~ 83 (453)
..+|||+|++.||+||++ +++|++||+++||||||+|+||++||++|+++++ |+||+.|++||++|++.++++
T Consensus 15 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~ 88 (500)
T 3aq1_B 15 GATILKEMDIQHPAAKMI------VEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISEGYRHAAEKCREI 88 (500)
T ss_dssp ----------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCcCCCHHHHHH------HHHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 368999999999999999 3889999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--CHHHHHHHHHHhcC------CChhHHHHHHHHHHhhccC--Cc--------eeee--cCCcccceeEEE
Q 012945 84 LDCQARKIT--TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN--DL--------ITIF--DRKALYNELNFV 143 (453)
Q Consensus 84 L~~~s~~v~--~~~~l~~va~~s~~------~~~~la~li~~A~~~vg~~--~~--------I~v~--~g~~~~d~~~lv 143 (453)
|+++++|++ +.+.|.++|+||.+ +++.|++++++|+.+++++ |. |+|+ +|++. ++++++
T Consensus 89 L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~~g~~~~di~~~I~V~k~~G~~~-~ds~lv 167 (500)
T 3aq1_B 89 LETITIAISPDDEAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIEKRAGGSI-DDSELI 167 (500)
T ss_dssp HHHHCEECCTTCHHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECCSSSCEECHHHHEEEEEEESSCG-GGCEEE
T ss_pred HHHhcCCCCCCcHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccccCCccccccccEEEEEecCCCc-cceEEE
Confidence 999999986 47899999997743 4678999999999999865 43 5676 78887 479999
Q ss_pred eeEEEecccCCCcccccccccceeecCeEEEecccc-------------cCCHHHH-----------HHHHHHHHHcCCC
Q 012945 144 KGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVI-----------RQASLPCMMQGQS 199 (453)
Q Consensus 144 ~G~~~~~g~~~p~~~~~~~~~~~~l~~p~Ili~d~~-------------i~~~~~i-----------~~~le~i~~~~~~ 199 (453)
+|++|+++|.||||+ .+++||+|+++|++ |++++++ .++++++.++|+|
T Consensus 168 ~G~v~dk~~~~~~m~-------~~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~ 240 (500)
T 3aq1_B 168 DGLVIDKERSHPNMP-------EKVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMREMAEKVIASGAN 240 (500)
T ss_dssp SEEEESCCCSSTTSC-------SEEEEEEEEEESSCBCC-------------------------CHHHHHHHHHHTTCCS
T ss_pred eeeEEeecCCCCCCc-------ccccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence 999999999999984 36899999999998 6666664 8999999999999
Q ss_pred EEEEecCcchhhhhhHHhhhccCCcceEEEEccCcccchhhHHHHHHHHhCCEEeeCCCCCCccCCCCCCceeeeEEEEe
Q 012945 200 LLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT 279 (453)
Q Consensus 200 lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~~~~r~~~Le~la~~tG~~i~~~~~~~~~~~~~~~~LG~~~~v~i~ 279 (453)
|||++++|+++|+++|..| +|+||+ +.++++|+|||++|||+++++ ++++++++||+|++|++.
T Consensus 241 lvi~~~~I~~~al~~L~~~------~I~av~-----~~~k~~le~ia~~tGa~iis~-----l~~~~~~~LG~a~~v~~~ 304 (500)
T 3aq1_B 241 VVFCQKGIDDMAQYYIEKA------GIYAVR-----RVKKSDLKRLSKVTGATIIQD-----LDQITTEDVGTAGLVEEK 304 (500)
T ss_dssp EEEESSCBCHHHHHHHHHT------TCEEEC-----SCCHHHHHHHHHHHCCCCBSC-----TTCCCSTTCEEEEEEEEE
T ss_pred EEEECCCcCHHHHHHHHHC------CEEEEE-----eCCHHHHHHHHHHhCCeEecc-----cccCCHhHCCCceEEEEE
Confidence 9999999999999999986 478997 467889999999999999996 899999999999999865
Q ss_pred ---cceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHH
Q 012945 280 ---MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAK 356 (453)
Q Consensus 280 ---~~~~~~~~g~~~~~~i~~r~~~l~~~~~~~~s~~l~eRl~~l~g~~~tI~vrG~t~~~l~E~er~i~DAl~~~~~al 356 (453)
++++++++||+++ ++|||+|||+|+++++|+||++|||+|++|+++
T Consensus 305 ~ig~~~~~~~~g~~~~-------------------------------~~~TI~lrG~t~~~l~E~er~l~Dal~~~r~~~ 353 (500)
T 3aq1_B 305 EVRGGKMTYVTGCQNS-------------------------------KAVTVLLHGGTEHVVDSLDHALNDALHVVGVVI 353 (500)
T ss_dssp ECSSSEEEEEEEETTC-------------------------------CCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EecCeEEEEEECCCCC-------------------------------ceEEEEecCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999998754 579999999999999999999999999999999
Q ss_pred HcC-CcCChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCC
Q 012945 357 EEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPA 430 (453)
Q Consensus 357 ~~g-vVpGGGa~e~~~s~~L~~~~~~-~~~e~~g~~~~a~AL~~~p~~La~NaG~d~~~v-~~l~~~---~~~~~G~d~~ 430 (453)
++| +|||||++|++++++|++++.. ++++|+++++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.
T Consensus 354 ~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~ 433 (500)
T 3aq1_B 354 EDGKVVVGGGSSEVELSLRLSEYASTLKGREQLAVSKFAEALEVIPVALAENAGLDPIDIMVELRSQHEKGNKNAGLNVY 433 (500)
T ss_dssp HHSEEEETTTHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHTTCTTEEECTT
T ss_pred HCCCCCCCCcHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhcCCCCCeeEeCC
Confidence 999 9999999999999999999764 899999999999999999999999999999999 999863 4468999999
Q ss_pred CCcccchhhcceeeccCcCcc
Q 012945 431 RGLFFQIKKIKSKKAWCFPMF 451 (453)
Q Consensus 431 ~~~~~dm~~~gi~ep~~~~~~ 451 (453)
+|++.||++.|||||+.+|..
T Consensus 434 ~g~~~d~~~~gI~dp~~vk~~ 454 (500)
T 3aq1_B 434 TGEVVDMWENDVIEPLRIKTQ 454 (500)
T ss_dssp TCCEEETTTTTCEEEHHHHHH
T ss_pred CCCccchHhcCCCCCHHHHHH
Confidence 999999999999999999864
No 11
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=1.8e-83 Score=684.59 Aligned_cols=391 Identities=16% Similarity=0.230 Sum_probs=353.4
Q ss_pred HHHHhhhccccCccccccccchhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012945 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (453)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~~~~~~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~-g~~P~~I~~G~~~a~~~~~~~ 83 (453)
..+|||+|++.||+||++ +++|++||+++||||||+||||++||++|+++++ |+||+.|++||++|++.++++
T Consensus 66 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 139 (559)
T 3p9d_A 66 GATILSLLDVQHPAGKIL------VELAQQQDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRF 139 (559)
T ss_dssp HHHHHHHHCCCSHHHHHH------HHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCHHHHHH------HHHHHHHHHHcCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999998 4899999999999999999999999999999999 999999999999999999999
Q ss_pred Hhc-cccccCC--HHHHHHHHHHhcCC------ChhHHHHHHHHHHhhcc-----CCc-----eeee--cCCcccceeEE
Q 012945 84 LDC-QARKITT--FEEIAQVGTTAANG------DGEIGELIAKVFEKGWE-----NDL-----ITIF--DRKALYNELNF 142 (453)
Q Consensus 84 L~~-~s~~v~~--~~~l~~va~~s~~~------~~~la~li~~A~~~vg~-----~~~-----I~v~--~g~~~~d~~~l 142 (453)
|++ +++|++. .+.|.++|++|+++ +++|++++++|+.++++ ++. |+|+ .|+++. ++++
T Consensus 140 L~~~~s~~v~~~~~e~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~~~~i~l~~I~I~k~~Ggs~~-ds~l 218 (559)
T 3p9d_A 140 INEVLSTSVDTLGKETLINIAKTSMSSKIIGADSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHGKSAT-ESLL 218 (559)
T ss_dssp HHHHTGGGSCC--CTTHHHHHHHTTSSSGGGTTHHHHHHHHHHHHHHHCCEESSSCEECCTTCCCEEEEESSCSS-CCBC
T ss_pred HHHhcccCCCCCCHHHHHHHHHHHhccCcccchhHHHHHHHHHHHHHhcccccCCCCccchhHeEEEEecCCCcc-ceeE
Confidence 999 9999874 67899999999875 68899999999999983 244 4444 377776 5899
Q ss_pred EeeEEEecccCCCcccccccccceeec--CeEEEeccccc-------------CCHHH-----------HHHHHHHHHHc
Q 012945 143 VKGMKLEWGLKSPYFFTHKNKKECVLD--GALVLIYDTKI-------------SNSNV-----------IRQASLPCMMQ 196 (453)
Q Consensus 143 v~G~~~~~g~~~p~~~~~~~~~~~~l~--~p~Ili~d~~i-------------~~~~~-----------i~~~le~i~~~ 196 (453)
++||+|+++|.||||++ .++ ||+|+++|++| +++++ +.++++++.++
T Consensus 219 v~G~v~dk~~~~~~m~~-------~ie~~n~kIll~~~~Le~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~ 291 (559)
T 3p9d_A 219 VPGYALNCTVASQAMPK-------RIAGGNVKIACLDLNLQKARMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDA 291 (559)
T ss_dssp CSEECCCCCCSSTTSCS-------EECSSSBCEEEETTCCSCCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred eccEEEeecccCCCcce-------eeccCCceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999863 677 99999999876 33333 68899999999
Q ss_pred CCCEEEEecCcchhhhhhHHhhhccCCcceEEEEccCcccchhhHHHHHHHHhCCEEeeCCCCCCc-cCCCCCCceeeeE
Q 012945 197 GQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNS-TYFVPLKLGSCKR 275 (453)
Q Consensus 197 ~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~~~~r~~~Le~la~~tG~~i~~~~~~~~~-~~~~~~~LG~~~~ 275 (453)
|+||||++++|+++|+++|..|+ |++|+ +.++.+|+|||++|||+++++..++.. +++++++||+|++
T Consensus 292 g~~lvI~~~~I~~~al~~L~~~~------I~av~-----~~~k~~le~ia~~TGa~iis~~~~l~~~e~~~~~~LG~a~~ 360 (559)
T 3p9d_A 292 GAQVVLTTKGIDDLCLKEFVEAK------IMGVR-----RCKKEDLRRIARATGATLVSSMSNLEGEETFESSYLGLCDE 360 (559)
T ss_dssp CCSEEEESSCCCGGGTHHHHHTT------CEEES-----SCCHHHHHHHHHHSSCCCBCCSCCSTTCCCCCTTTSCCEEE
T ss_pred CCCEEEEcCCCCHHHHHHHHHcC------CceEc-----cCCHHHHHHHHHHhCCEEEeccccccccccCCHhHCccceE
Confidence 99999999999999999999875 67887 456788999999999999998766655 8899999999999
Q ss_pred EE---EecceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHH
Q 012945 276 VI---ATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAV 352 (453)
Q Consensus 276 v~---i~~~~~~~~~g~~~~~~i~~r~~~l~~~~~~~~s~~l~eRl~~l~g~~~tI~vrG~t~~~l~E~er~i~DAl~~~ 352 (453)
|+ ++++++++|.||+++ ++|||+|||+|+++++|+||+++||||++
T Consensus 361 v~~~~ig~~~~~~~~g~~~~-------------------------------~~~tI~lrG~te~~l~E~kr~l~DAL~~~ 409 (559)
T 3p9d_A 361 VVQAKFSDDECILIKGTSKH-------------------------------SSSSIILRGANDYSLDEMERSLHDSLSVV 409 (559)
T ss_dssp EEEEECSSCEEECEEEESSS-------------------------------CCCCEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCceEEEEEcCCCC-------------------------------CEEEEEEcCCCHHHHHHHHHHHHHHHHHH
Confidence 98 689999999998764 57999999999999999999999999999
Q ss_pred HHHHHcC-CcCChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCC---
Q 012945 353 QAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSS--- 423 (453)
Q Consensus 353 ~~al~~g-vVpGGGa~e~~~s~~L~~~~~~-~~~e~~g~~~~a~AL~~~p~~La~NaG~d~~~v-~~l~~~---~~~--- 423 (453)
|+++++| +|||||++|++++.+|++++.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.
T Consensus 410 r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~ 489 (559)
T 3p9d_A 410 KRTLESGNVVPGGGCVEAALNIYLDNFATTVGSREQLAIAEFAAALLIIPKTLAVNAAKDSSELVAKLRSYHAASQMAKP 489 (559)
T ss_dssp HHHHTSSCEECTTTTHHHHHHHHHHHHHTTSCTTHHHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHTTSCCC-
T ss_pred HHHhhcCCEEeCccHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHhccccccc
Confidence 9999998 9999999999999999999875 899999999999999999999999999999999 999773 333
Q ss_pred ---------CeeEeCCCCcccchhhcceeeccCcCcc
Q 012945 424 ---------DLGYNPARGLFFQIKKIKSKKAWCFPMF 451 (453)
Q Consensus 424 ---------~~G~d~~~~~~~dm~~~gi~ep~~~~~~ 451 (453)
++|||+.+|++.||++.|||||+.||..
T Consensus 490 ~~~~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~ 526 (559)
T 3p9d_A 490 EDVKRRSYRNYGLDLIRGKIVDEIHAGVLEPTISKVK 526 (559)
T ss_dssp ---CCCCCCCEEECTTSSSEEESTTSSCCEEHHHHHH
T ss_pred cccccccccceeEECCCCcEeehhhccCEecHHHHHH
Confidence 7999999999999999999999999864
No 12
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=2.4e-82 Score=674.95 Aligned_cols=386 Identities=16% Similarity=0.228 Sum_probs=354.6
Q ss_pred HHHHhhhccccCccccccccchhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012945 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (453)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~~~~~~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~-g~~P~~I~~G~~~a~~~~~~~ 83 (453)
..+|||+|++.||+||++ +++|++||+++||||||+||||++||++++++++ |+||+.|++||++|++.++++
T Consensus 65 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~ 138 (548)
T 1q3q_A 65 CATILDKIDLQHPAAKMM------VEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEI 138 (548)
T ss_dssp HHHHHHHSCCCSHHHHHH------HHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhccchHHHHH------HHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999998 4899999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--CHHHHHHHHHHhcC------CChhHHHHHHHHHHhhccC--C-------ceeee--cCCcccceeEEEe
Q 012945 84 LDCQARKIT--TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN--D-------LITIF--DRKALYNELNFVK 144 (453)
Q Consensus 84 L~~~s~~v~--~~~~l~~va~~s~~------~~~~la~li~~A~~~vg~~--~-------~I~v~--~g~~~~d~~~lv~ 144 (453)
|+++++|++ +.++|.++|+||.+ +++.|++++++|+.+++++ | .|+|+ +|++.. ++++++
T Consensus 139 L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~V~~~~~g~~~~d~~~I~V~k~~G~~~~-ds~lv~ 217 (548)
T 1q3q_A 139 LDEIAIRVDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVE-ESELVR 217 (548)
T ss_dssp HHHHCEECCTTCHHHHHHHHHHHSCSSTTGGGHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEEEEBSCGG-GCEEES
T ss_pred HHHhcCCCCCCCHHHHHHHHHHHhhccccccchHHHHHHHHHHHHHhccccCCCccccCCeEEEEEecCCCcc-ceEEEe
Confidence 999999987 47899999998754 3578999999999999865 3 68887 788875 579999
Q ss_pred eEEEecccCCCcccccccccceeecCeEEEecccc-------------cCCHHHH-----------HHHHHHHHHcCCCE
Q 012945 145 GMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVI-----------RQASLPCMMQGQSL 200 (453)
Q Consensus 145 G~~~~~g~~~p~~~~~~~~~~~~l~~p~Ili~d~~-------------i~~~~~i-----------~~~le~i~~~~~~l 200 (453)
|++|+++|.||||+ ..++||+|+++|++ |++++++ .++++++.++|+||
T Consensus 218 G~v~dk~~~~~~m~-------~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~l 290 (548)
T 1q3q_A 218 GVVIDKEVVHPRMP-------KRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANV 290 (548)
T ss_dssp SEEESCCCSSTTSC-------SEESSEEEEEECSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCE
T ss_pred eEEEeccCCCCCCc-------ceecCCEEEEEecCcCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCE
Confidence 99999999999994 26899999999998 7777775 78899999999999
Q ss_pred EEEecCcchhhhhhHHhhhccCCcceEEEEccCcccchhhHHHHHHHHhCCEEeeCCCCCCccCCCCCCceeeeEEEEe-
Q 012945 201 LVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT- 279 (453)
Q Consensus 201 vii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~~~~r~~~Le~la~~tG~~i~~~~~~~~~~~~~~~~LG~~~~v~i~- 279 (453)
||++++|+++|+++|..|+ |+||+ +.++++|+|||++|||+++++ ++++++++||+|++|++.
T Consensus 291 vi~~~~I~~~al~~L~~~~------I~av~-----~~~k~~le~ia~~tGa~ii~~-----l~~~~~~~LG~a~~v~~~~ 354 (548)
T 1q3q_A 291 VFVQKGIDDLAQHYLAKYG------IMAVR-----RVKKSDMEKLAKATGAKIVTN-----VKDLTPEDLGYAEVVEERK 354 (548)
T ss_dssp EEESSCBCHHHHHHHHHTT------CEEEC-----SCCHHHHHHHHHHHCCCCBSS-----GGGCCGGGCEEESEEEEEE
T ss_pred EEEcCCcCHHHHHHHHHCC------cEEEc-----cCCHHHHHHHHHHhCCeEecc-----cccCCHHHCCCceEEEEEE
Confidence 9999999999999999864 78987 467889999999999999996 899999999999999864
Q ss_pred --cceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHH
Q 012945 280 --MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKE 357 (453)
Q Consensus 280 --~~~~~~~~g~~~~~~i~~r~~~l~~~~~~~~s~~l~eRl~~l~g~~~tI~vrG~t~~~l~E~er~i~DAl~~~~~al~ 357 (453)
++++++++||+++ ++|||+|||+|+++++|+||++|||||++|++++
T Consensus 355 ig~~~~~~~~g~~~~-------------------------------~~~TI~lrG~te~~l~E~er~l~DAl~~~r~a~~ 403 (548)
T 1q3q_A 355 LAGENMIFVEGCKNP-------------------------------KAVTILIRGGTEHVIDEVERALEDAVKVVKDVME 403 (548)
T ss_dssp ETTEEEEEEECCSSC-------------------------------SSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCceEEEEecCCCC-------------------------------CeEEEEECCCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999998764 5699999999999999999999999999999999
Q ss_pred cC-CcCChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCC
Q 012945 358 EG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPAR 431 (453)
Q Consensus 358 ~g-vVpGGGa~e~~~s~~L~~~~~~-~~~e~~g~~~~a~AL~~~p~~La~NaG~d~~~v-~~l~~~---~~~~~G~d~~~ 431 (453)
+| +|||||++|++++.+|++++.. ++++|+++++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+
T Consensus 404 ~~~ivpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~ 483 (548)
T 1q3q_A 404 DGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFE 483 (548)
T ss_dssp SCEEEECTTHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTEEEETTT
T ss_pred CCCcccCCcHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceeCCC
Confidence 99 9999999999999999999764 899999999999999999999999999999999 999863 34689999999
Q ss_pred CcccchhhcceeeccCcCcc
Q 012945 432 GLFFQIKKIKSKKAWCFPMF 451 (453)
Q Consensus 432 ~~~~dm~~~gi~ep~~~~~~ 451 (453)
|++.||++.|||||+.+|..
T Consensus 484 g~~~d~~~~gI~dp~~vk~~ 503 (548)
T 1q3q_A 484 GKPADMLEKGIIEPLRVKKQ 503 (548)
T ss_dssp TEEEETTTTTCEEEHHHHHH
T ss_pred CCccchhhcCCEecHHHHHH
Confidence 99999999999999999864
No 13
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=5.6e-82 Score=669.98 Aligned_cols=391 Identities=15% Similarity=0.167 Sum_probs=350.1
Q ss_pred HHHHhhhccccCccccccccchhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012945 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (453)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~~~~~~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~-g~~P~~I~~G~~~a~~~~~~~ 83 (453)
..+|||+|++.||+||++ +++|++||+++||||||+||||++||++|+++++ |+||+.|++||++|++.++++
T Consensus 52 G~tIlk~i~v~hP~akll------~~~a~~qd~e~GDGTTtvvvLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 125 (529)
T 3iyg_A 52 GATILKLLEVEHPAAKVL------CELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRY 125 (529)
T ss_pred HHHHHHHcccCChHHHHH------HHHHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999998 3899999999999999999999999999999999 999999999999999999999
Q ss_pred Hhc-cccccC--CHHHHHHHHHHhcC------CChhHHHHHHHHHHhhc---cCC-----c--eeee--cCCcccceeEE
Q 012945 84 LDC-QARKIT--TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGW---END-----L--ITIF--DRKALYNELNF 142 (453)
Q Consensus 84 L~~-~s~~v~--~~~~l~~va~~s~~------~~~~la~li~~A~~~vg---~~~-----~--I~v~--~g~~~~d~~~l 142 (453)
|++ +++|++ +.+.|.++|+||++ ++++|++++++|+.+++ ++| . |+|+ .|+++ +++++
T Consensus 126 L~~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~g~~~~dv~~I~I~k~~G~~~-~ds~l 204 (529)
T 3iyg_A 126 ISENLIINTDELGRDCLINAAKTSMSSKVIGINGDFFANLVVDAVLAIKYTDIRGQPRYPVNSINVLKAHGRSQ-MESML 204 (529)
T ss_pred HHHhcccCCCCCCHHHHHHHHHHHhccCcccccHHHHHHHHHHHHHHHhhhccCCCcccccceEEEEEecCCCc-cceEE
Confidence 999 999987 68899999999875 36889999999999997 333 2 6664 56665 46899
Q ss_pred EeeEEEecccCCCcccccccccceeecCeEEEeccccc-------------CCHH-----------HHHHHHHHHHHcCC
Q 012945 143 VKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKI-------------SNSN-----------VIRQASLPCMMQGQ 198 (453)
Q Consensus 143 v~G~~~~~g~~~p~~~~~~~~~~~~l~~p~Ili~d~~i-------------~~~~-----------~i~~~le~i~~~~~ 198 (453)
++|++|+++|.||+|++ .++||+|+++|+++ ++++ .+.++++++.+.|+
T Consensus 205 v~G~v~dk~~~~~~m~~-------~ien~kIlll~~~le~~k~e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~ 277 (529)
T 3iyg_A 205 INGYALNCVVGSQGMPK-------RIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGA 277 (529)
T ss_pred EeeeEEecCcccccCCc-------ccCCceEEEecCCcccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999864 68899999999854 3332 26678899999999
Q ss_pred CEEEEecCcchhhhhhHHhhhccCCcceEEEEccCcccchhhHHHHHHHHhCCEEeeCCCCCC-ccCCCCCCceeeeEEE
Q 012945 199 SLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMN-STYFVPLKLGSCKRVI 277 (453)
Q Consensus 199 ~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~~~~r~~~Le~la~~tG~~i~~~~~~~~-~~~~~~~~LG~~~~v~ 277 (453)
||||++++|+++++++|..| +|++|++ .++++|+|||++|||+++++..++. .+++++++||+|+.|+
T Consensus 278 nvvi~~~~I~d~al~~L~~~------gI~av~~-----v~k~~leria~~tGa~iv~~~~~l~~~e~~~~~~LG~a~~v~ 346 (529)
T 3iyg_A 278 NVILTTGGIDDMCLKYFVEA------GAMAVRR-----VLKRDLKRIAKASGATVLSTLANLEGEETFEASMLGQAEEVV 346 (529)
T ss_pred CEEEECCCCCHHHHHHHHHc------CCceecc-----CCHHHHHHHHHHhCCeeecchhcccchhccChhhCccceEEE
Confidence 99999999999999999987 4789984 5678899999999999999865554 2456788999999997
Q ss_pred ---EecceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHH
Q 012945 278 ---ATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQA 354 (453)
Q Consensus 278 ---i~~~~~~~~~g~~~~~~i~~r~~~l~~~~~~~~s~~l~eRl~~l~g~~~tI~vrG~t~~~l~E~er~i~DAl~~~~~ 354 (453)
++++++++|.||+++ +.|||+|||+|+++++|+||++|||||++|+
T Consensus 347 ~~~ig~~~~~~~~g~~~~-------------------------------~~~TI~lrG~t~~~l~E~er~l~Dal~v~r~ 395 (529)
T 3iyg_A 347 QERICDDELILIKNTKAR-------------------------------TSASVILRGANDFMCDEMERSLHDALCVVKR 395 (529)
T ss_pred EEEeCCceEEEEEcCCCC-------------------------------ceEEEEECCchHHHHHHHHHHHHHHHHHHHH
Confidence 789999999998775 4699999999999999999999999999999
Q ss_pred HHHcC-CcCChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CC------
Q 012945 355 AKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DS------ 422 (453)
Q Consensus 355 al~~g-vVpGGGa~e~~~s~~L~~~~~~-~~~e~~g~~~~a~AL~~~p~~La~NaG~d~~~v-~~l~~~---~~------ 422 (453)
++++| +|||||++|+++|++|++++.. ++++|+++++|++||+.||++||+|||+|+.++ .+|++. ++
T Consensus 396 ~v~~~~iVpGGGa~E~~ls~~L~~~~~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~ 475 (529)
T 3iyg_A 396 VLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERK 475 (529)
T ss_pred HhhCCeEEeCCcHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccccccccc
Confidence 99998 9999999999999999999875 899999999999999999999999999999999 999873 22
Q ss_pred --CCeeEeCCCCcccchhhcceeeccCcCcc
Q 012945 423 --SDLGYNPARGLFFQIKKIKSKKAWCFPMF 451 (453)
Q Consensus 423 --~~~G~d~~~~~~~dm~~~gi~ep~~~~~~ 451 (453)
.++|||+.+|++.||++.|||||+.+|..
T Consensus 476 ~~~~~G~d~~~g~~~d~~~~gV~dp~~vk~~ 506 (529)
T 3iyg_A 476 NLKWIGLDLVNGKPRDNKQAGVFEPTIVKVK 506 (529)
T ss_pred cCceeeeeCCCCCccChhhccCEecHHHHHH
Confidence 57999999999999999999999999864
No 14
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=6.2e-83 Score=676.75 Aligned_cols=390 Identities=14% Similarity=0.120 Sum_probs=350.6
Q ss_pred HHHHhhhccccCccccccccchhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012945 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (453)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~~~~~~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~-g~~P~~I~~G~~~a~~~~~~~ 83 (453)
..+|||+|++.||+||++ +++|++||+++||||||+||||++||++|+++++ |+||+.|++||++|++.++++
T Consensus 61 G~tIlk~i~v~hP~akll------~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 134 (528)
T 3p9d_D 61 GHTILKQMAILHPVARML------VEVSAAQDSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDI 134 (528)
T ss_dssp HHHHHHHSCCCCTTHHHH------HHHHHHHHHHTCSCSHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcccCCHHHHHH------HHHHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHH
Confidence 468999999999999998 4899999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--CHHHHHHHHHHhcCC------ChhHHHHHHHHHHhhcc--CCceeee-------cCCcccceeEEEeeE
Q 012945 84 LDCQARKIT--TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWE--NDLITIF-------DRKALYNELNFVKGM 146 (453)
Q Consensus 84 L~~~s~~v~--~~~~l~~va~~s~~~------~~~la~li~~A~~~vg~--~~~I~v~-------~g~~~~d~~~lv~G~ 146 (453)
|++++.|++ +.+.|.++|+||+++ +++|++++++|+.++++ ++.|.++ .|+++. ++++++||
T Consensus 135 L~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~i~v~~I~I~k~~Gg~~~-ds~lv~G~ 213 (528)
T 3p9d_D 135 LLEMCHKVSLSDREQLVRAASTSLSSKIVSQYSSFLAPLAVDSVLKISDENSKNVDLNDIRLVKKVGGTID-DTEMIDGV 213 (528)
T ss_dssp HHTTCCCCCSCCHHHHHHHHHHHSCSSSCSTTHHHHHHHHHHHHHTTCCTTTTCCCGGGSBCCCCCSSCSC-CCEEESSC
T ss_pred HHHhhCCCCCCCHHHHHHHHHHHhcCCccchhHHHHHHHHHHHHHHhccccCCccceEEEEEEEecCCCcc-ceEEEeee
Confidence 999999988 789999999999875 57899999999999986 4544443 277775 68999999
Q ss_pred EEecccCCCcccccccccceeecCeEEEecccccC-------------CHH-----------HHHHHHHHHHHcCCCEEE
Q 012945 147 KLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKIS-------------NSN-----------VIRQASLPCMMQGQSLLV 202 (453)
Q Consensus 147 ~~~~g~~~p~~~~~~~~~~~~l~~p~Ili~d~~i~-------------~~~-----------~i~~~le~i~~~~~~lvi 202 (453)
+|+++|.|||| |+..++||+|+++|++|+ +++ ++.++++++.+.|+||||
T Consensus 214 v~dk~~~~~~~------m~~~ien~kIll~~~~le~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi 287 (528)
T 3p9d_D 214 VLTQTAIKSAG------GPTRKEKAKIGLIQFQISPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLL 287 (528)
T ss_dssp BCCCCCCCSSS------CCSEESSEEEEEECCCSSCCCCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred EEeecccCccc------CcccccCceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999994 235799999999999765 343 378899999999999999
Q ss_pred EecCc-----chhhhhhHHhhhccCCcceEEEEccCcccchhhHHHHHHHHhCCEEeeCCCCCCccCCCCCCceeeeEEE
Q 012945 203 VAEDV-----ENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI 277 (453)
Q Consensus 203 i~~~i-----~~~al~~l~~n~~~~~~~i~avk~~~~~~~r~~~Le~la~~tG~~i~~~~~~~~~~~~~~~~LG~~~~v~ 277 (453)
++++| +++++++|..| +|++|++ .++.+|+|||++|||+++++ ++++++++||+|+.|+
T Consensus 288 ~~~~I~~~a~~~~al~~L~~~------~I~av~~-----~~k~~le~ia~~tGa~ii~~-----~~~l~~~~LG~a~~v~ 351 (528)
T 3p9d_D 288 IQKSILRDAVNDLALHFLSKL------NIMVVKD-----IEREEIEFLSKGLGCKPIAD-----IELFTEDRLDSADLVE 351 (528)
T ss_dssp ESSCSCTTSCSCHHHHHHTTT------SCCEEEC-----CCTHHHHHHHHHHTCCCCSC-----STTCCSSSEEEESCEE
T ss_pred EeCCcccccCCHHHHHHHHHc------CcEEEEe-----CCHHHHHHHHHHHCCEEecc-----cccCCHHHCCcccEEE
Confidence 99999 99999988865 4789995 45678999999999999996 7889999999999997
Q ss_pred ---EecceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHH
Q 012945 278 ---ATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQA 354 (453)
Q Consensus 278 ---i~~~~~~~~~g~~~~~~i~~r~~~l~~~~~~~~s~~l~eRl~~l~g~~~tI~vrG~t~~~l~E~er~i~DAl~~~~~ 354 (453)
+++++++++.+|.... .+++|||+|||+|+++++|+||++|||||++|+
T Consensus 352 ~~~ig~~~~~~i~g~~~~~----------------------------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~ 403 (528)
T 3p9d_D 352 EIDSDGSKIVRVTGIRNNN----------------------------ARPTVSVVIRGANNMIIDETERSLHDALCVIRC 403 (528)
T ss_dssp CCEETTEECCBCTTBCCGG----------------------------GCCCCEEECCCSSTTHHHHHHHHHTTTHHHHHH
T ss_pred EEEECCEEEEEEEcccccC----------------------------CCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4567888998875211 146899999999999999999999999999999
Q ss_pred HHHcC-CcCChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEe
Q 012945 355 AKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYN 428 (453)
Q Consensus 355 al~~g-vVpGGGa~e~~~s~~L~~~~~~-~~~e~~g~~~~a~AL~~~p~~La~NaG~d~~~v-~~l~~~---~~~~~G~d 428 (453)
++++| +|||||++|++++.+|++++.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.++|||
T Consensus 404 av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d 483 (528)
T 3p9d_D 404 LVKERGLIAGGGAPEIEISRRLSKEARSMEGVQAFIWQEFASALEVIPTTLAENAGLNSIKVVTELRSKHENGELNDGIS 483 (528)
T ss_dssp HHHSSCEEETTTHHHHHHHHHHHHCCTTSCHHHHTTHHHHHHHHTHHHHHHHHTTSSCHHHHHHHHTTCCCSSSCCCCCC
T ss_pred HHhcCCccCCCCHHHHHHHHHHHHHhhccChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccCCcccee
Confidence 99998 9999999999999999999875 899999999999999999999999999999999 999873 45789999
Q ss_pred CCCCcccchhhcceeeccCcCcc
Q 012945 429 PARGLFFQIKKIKSKKAWCFPMF 451 (453)
Q Consensus 429 ~~~~~~~dm~~~gi~ep~~~~~~ 451 (453)
+.+|++.||++.|||||+.||..
T Consensus 484 ~~~g~~~dm~~~gI~dp~~vk~~ 506 (528)
T 3p9d_D 484 VRRSGTTNTYEEHILQPVLVSTS 506 (528)
T ss_dssp SSSSSCCCHHHHCCEEEHHHHHH
T ss_pred cCCCCccchHhccCeecHHHHHH
Confidence 99999999999999999999864
No 15
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=3.4e-82 Score=673.36 Aligned_cols=385 Identities=18% Similarity=0.218 Sum_probs=353.3
Q ss_pred HHHHhhhccccCccccccccchhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012945 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (453)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~~~~~~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~-g~~P~~I~~G~~~a~~~~~~~ 83 (453)
..+|||+|++.||+||++ +++|++||+++||||||+||||++||++++++++ |+||+.|++||++|++.++++
T Consensus 64 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~ 137 (545)
T 1a6d_A 64 GATILKEMDVEHPTAKMI------VEVSKAQDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKI 137 (545)
T ss_dssp HHHHHHHSCCCSHHHHHH------HGGGGCTTTCSTTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhccchHHHHH------HHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999998 4899999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC-CHHHHHHHHHHhcC------CChhHHHHHHHHHHhhccC---------Cceeee--cCCcccceeEEEee
Q 012945 84 LDCQARKIT-TFEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN---------DLITIF--DRKALYNELNFVKG 145 (453)
Q Consensus 84 L~~~s~~v~-~~~~l~~va~~s~~------~~~~la~li~~A~~~vg~~---------~~I~v~--~g~~~~d~~~lv~G 145 (453)
|+++++| + +.+.|.++|+||.+ +++.|++++++|+.+++++ +.|+|+ +|++.. ++++++|
T Consensus 138 L~~~s~~-~~~~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~-ds~lv~G 215 (545)
T 1a6d_A 138 IDEIAEK-STDDATLRKIALTALSGKNTGLSNDFLADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGGSVN-DTQFISG 215 (545)
T ss_dssp HHHHCEE-CCCHHHHHHHHHHHTTTSSCCSTHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEECCCSCST-TCEEESE
T ss_pred HHHhcCC-CCCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHhcccCCCcccccceEEEEEecCCCce-eeEEEee
Confidence 9999998 7 78999999998753 3578999999999999865 368887 788875 5799999
Q ss_pred EEEecccCCCcccccccccceeecCeEEEecccc-------------cCCHHHH-----------HHHHHHHHHcCCCEE
Q 012945 146 MKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVI-----------RQASLPCMMQGQSLL 201 (453)
Q Consensus 146 ~~~~~g~~~p~~~~~~~~~~~~l~~p~Ili~d~~-------------i~~~~~i-----------~~~le~i~~~~~~lv 201 (453)
++|+++|.||||+ ..++||+|+++|++ |++++++ .++++++.++|+|||
T Consensus 216 ~v~dk~~~~~~m~-------~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lv 288 (545)
T 1a6d_A 216 IVIDKEKVHSKMP-------DVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVV 288 (545)
T ss_dssp EEESCCCSCTTSC-------SEEEEEEEEEECSCBSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred EEEeccCCCCCCc-------ceecCCEEEEEecCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE
Confidence 9999999999994 26899999999998 6666664 789999999999999
Q ss_pred EEecCcchhhhhhHHhhhccCCcceEEEEccCcccchhhHHHHHHHHhCCEEeeCCCCCCccCCCCCCceeeeEEEEe--
Q 012945 202 VVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIAT-- 279 (453)
Q Consensus 202 ii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~~~~r~~~Le~la~~tG~~i~~~~~~~~~~~~~~~~LG~~~~v~i~-- 279 (453)
|++++|+++|+++|..|+ |+||+ +.++++|+|||++|||+++++ ++++++++||+|++|++.
T Consensus 289 i~~~~I~~~al~~L~~~~------I~av~-----~~~k~~le~ia~~tGa~iis~-----l~~~~~~~LG~a~~v~~~~i 352 (545)
T 1a6d_A 289 LCQKGIDDVAQHYLAKEG------IYAVR-----RVKKSDMEKLAKATGAKIVTD-----LDDLTPSVLGEAETVEERKI 352 (545)
T ss_dssp EESSCBCHHHHHHHHHHT------CEEEC-----SCCHHHHHHHHHHHCCCEESS-----GGGCCGGGCEEEEEEEEEEE
T ss_pred EECCCccHHHHHHHHHCC------eeEec-----cCCHHHHHHHHHHhCCeeecc-----cccCCHHHCCCceEEEEEEe
Confidence 999999999999999874 78997 467889999999999999996 899999999999999864
Q ss_pred -cceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHHc
Q 012945 280 -MDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE 358 (453)
Q Consensus 280 -~~~~~~~~g~~~~~~i~~r~~~l~~~~~~~~s~~l~eRl~~l~g~~~tI~vrG~t~~~l~E~er~i~DAl~~~~~al~~ 358 (453)
++++++|+||+++ ++|||+|||+|+++++|+||++|||||++|+++++
T Consensus 353 g~~~~~~~~g~~~~-------------------------------~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~a~~~ 401 (545)
T 1a6d_A 353 GDDRMTFVMGCKNP-------------------------------KAVSILIRGGTDHVVSEVERALNDAIRVVAITKED 401 (545)
T ss_dssp TTEEEEEEEEESCS-------------------------------SCEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCceEEEEecCCCC-------------------------------ceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 7899999998764 56999999999999999999999999999999999
Q ss_pred C-CcCChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCC
Q 012945 359 G-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARG 432 (453)
Q Consensus 359 g-vVpGGGa~e~~~s~~L~~~~~~-~~~e~~g~~~~a~AL~~~p~~La~NaG~d~~~v-~~l~~~---~~~~~G~d~~~~ 432 (453)
| +|||||++|++++.+|++++.. ++++|+++++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+|
T Consensus 402 g~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g 481 (545)
T 1a6d_A 402 GKFLWGGGAVEAELAMRLAKYANSVGGREQLAIEAFAKALEIIPRTLAENAGIDPINTLIKLKADDEKGRISVGVDLDNN 481 (545)
T ss_dssp CEEEETTTHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTHHHHHHHHHHTSCHHHHHHHHHHHHHTTCTTEEEETTTT
T ss_pred CCEEeCcCHHHHHHHHHHHHHhhccCccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceecccC
Confidence 9 9999999999999999999864 899999999999999999999999999999999 999863 446899999999
Q ss_pred cccchhhcceeeccCcCcc
Q 012945 433 LFFQIKKIKSKKAWCFPMF 451 (453)
Q Consensus 433 ~~~dm~~~gi~ep~~~~~~ 451 (453)
++.||++.|||||+.+|..
T Consensus 482 ~~~d~~~~gI~dp~~vk~~ 500 (545)
T 1a6d_A 482 GVGDMKAKGVVDPLRVKTH 500 (545)
T ss_dssp EEEEHHHHTCEEEHHHHHH
T ss_pred ccccchhcCccccHHHHHH
Confidence 9999999999999999864
No 16
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=6.4e-82 Score=668.01 Aligned_cols=386 Identities=15% Similarity=0.174 Sum_probs=343.4
Q ss_pred HHHHhhhccccCccccccccchhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012945 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (453)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~~~~~~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~-g~~P~~I~~G~~~a~~~~~~~ 83 (453)
..+|||+|++.||+||++ +++|++||+++||||||+||||++||++|+++++ |+||+.|++||++|++.++++
T Consensus 53 G~tIlk~i~v~hP~akll------~~~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 126 (518)
T 3iyg_D 53 GATILKQMQVLHPAARML------VELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEI 126 (518)
T ss_pred HHHHHHHcccchHHHHHH------HHHHHHhhhhhCCCceeHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999998 4899999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--CHHHHHHHHHHhcCCC------hhHHHHHHHHHHhhcc---CCc-----eeee--cCCcccceeEEEee
Q 012945 84 LDCQARKIT--TFEEIAQVGTTAANGD------GEIGELIAKVFEKGWE---NDL-----ITIF--DRKALYNELNFVKG 145 (453)
Q Consensus 84 L~~~s~~v~--~~~~l~~va~~s~~~~------~~la~li~~A~~~vg~---~~~-----I~v~--~g~~~~d~~~lv~G 145 (453)
|++++.|++ +.+.|.++|++|++++ ++|++++++|+.++++ ++. |+|+ .|++. +++++++|
T Consensus 127 L~~~s~~v~~~~~~~l~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~~~d~~~I~V~k~~Gg~~-~ds~lv~G 205 (518)
T 3iyg_D 127 LTDMSRPVELSDRETLLNSAATSLNSKVVSQYSSLLSPMSVDAVMKVIDPATATSVDLRDIKIVKKLGGTI-DDCELVEG 205 (518)
T ss_pred HHHheeeCCCCChHHHHHHhHhhhccccchhhHHHHHHHHHHHHHHhhccccCCCcccceEEEEEcCCCCh-hhheEecc
Confidence 999999988 7889999999999864 7899999999999985 454 6676 45555 57999999
Q ss_pred EEEecccCCCcccccccccceeecCeEEEecccc-------------cCCHH-----------HHHHHHHHHHHcCCCEE
Q 012945 146 MKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSN-----------VIRQASLPCMMQGQSLL 201 (453)
Q Consensus 146 ~~~~~g~~~p~~~~~~~~~~~~l~~p~Ili~d~~-------------i~~~~-----------~i~~~le~i~~~~~~lv 201 (453)
|+|+++|.| .|+. .++||+|++++++ |++++ ++.++++++.+.|+|||
T Consensus 206 ~~~dk~~~~-~mp~-------~i~n~kIlll~~~Le~~k~~~~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lv 277 (518)
T 3iyg_D 206 LVLTQKVAN-SGIT-------RVEKAKIGLIQFCLSAPKTDMDNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVL 277 (518)
T ss_pred EEEeccccc-CCCc-------cccCceEEEEEeeccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 999999998 3321 3455666555554 44554 46788999999999999
Q ss_pred EE-----ecCcchhhhhhHHhhhccCCcceEEEEccCcccchhhHHHHHHHHhCCEEeeCCCCCCccCCCCCCceeeeEE
Q 012945 202 VV-----AEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRV 276 (453)
Q Consensus 202 ii-----~~~i~~~al~~l~~n~~~~~~~i~avk~~~~~~~r~~~Le~la~~tG~~i~~~~~~~~~~~~~~~~LG~~~~v 276 (453)
|+ +++|+++|+++|..| +|+|||+|++ .+|+|||++|||+++++ ++++++++||+|++|
T Consensus 278 i~~k~i~~~~I~~~Al~~L~~~------~I~av~~~~~-----~~le~ia~~tGa~ii~~-----l~~l~~~~LG~a~~v 341 (518)
T 3iyg_D 278 LIQKSILRDALSDLALHFLNKM------KIMVVKDIER-----EDIEFICKTIGTKPVAH-----VDQFTADMLGSAELA 341 (518)
T ss_pred EEeccccccCcCHHHHHHHHHc------CcEEEecCCH-----HHHHHHHHHhCCEEecc-----cccCCHHHCCcCcEE
Confidence 99 799999999999975 5899999864 45999999999999996 899999999999999
Q ss_pred EE---ec-ceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHH
Q 012945 277 IA---TM-DNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAV 352 (453)
Q Consensus 277 ~i---~~-~~~~~~~g~~~~~~i~~r~~~l~~~~~~~~s~~l~eRl~~l~g~~~tI~vrG~t~~~l~E~er~i~DAl~~~ 352 (453)
++ ++ +++++|+||++ ++++|||+|||+|+++++|+||++|||||++
T Consensus 342 ~~~~~g~~~~~~~~~g~~~------------------------------~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~ 391 (518)
T 3iyg_D 342 EEVSLNGSGKLIKITGCAS------------------------------PGKTVTIVVRGSNKLVIEEAERSIHDALCVI 391 (518)
T ss_pred EEEEeCCCceEEEEECCCC------------------------------CCceEEEEECCCCHHHHHHHHHHHHHHHHHH
Confidence 75 44 67899999864 1467999999999999999999999999999
Q ss_pred HHHHHcC-CcCChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCee
Q 012945 353 QAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLG 426 (453)
Q Consensus 353 ~~al~~g-vVpGGGa~e~~~s~~L~~~~~~-~~~e~~g~~~~a~AL~~~p~~La~NaG~d~~~v-~~l~~~---~~~~~G 426 (453)
|+++++| +|||||++|++++++|++++.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.++|
T Consensus 392 r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G 471 (518)
T 3iyg_D 392 RCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCIRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTG 471 (518)
T ss_pred HHHHhCCCEeecCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhccCCcee
Confidence 9999998 9999999999999999999875 899999999999999999999999999999999 999872 556899
Q ss_pred EeCCCCcccchhhcceeeccCcCcc
Q 012945 427 YNPARGLFFQIKKIKSKKAWCFPMF 451 (453)
Q Consensus 427 ~d~~~~~~~dm~~~gi~ep~~~~~~ 451 (453)
||+.+|++.||++.|||||+.||..
T Consensus 472 ~d~~~g~~~d~~~~gI~dp~~vk~~ 496 (518)
T 3iyg_D 472 INVRKGGISNILEELVVQPLLVSVS 496 (518)
T ss_pred EeCCCCcccchhhccCEEcHHHHHH
Confidence 9999999999999999999999864
No 17
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.3e-81 Score=665.54 Aligned_cols=393 Identities=16% Similarity=0.159 Sum_probs=346.9
Q ss_pred HHHHhhhccccCccccccccchhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012945 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (453)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~~~~~~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~-g~~P~~I~~G~~~a~~~~~~~ 83 (453)
..+|||+|++.||+||++ +++|++||+++||||||+||||++||++|+++++ |+||+.|++||++|++.++++
T Consensus 52 G~tIlk~i~~~hP~Akll------~~~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 125 (515)
T 3iyg_E 52 GATILSMMDVDHQIAKLM------VELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIEH 125 (515)
T ss_pred HHHHHHHcccCCHHHHHH------HHHHHHhhhhhCCchhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999998 4899999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC----CHHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccC-------Cceeee--cCCcccceeEEEe
Q 012945 84 LDCQARKIT----TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN-------DLITIF--DRKALYNELNFVK 144 (453)
Q Consensus 84 L~~~s~~v~----~~~~l~~va~~s~~~------~~~la~li~~A~~~vg~~-------~~I~v~--~g~~~~d~~~lv~ 144 (453)
|+++++|++ +.+.|.++|++|+++ .+.|++++++|+..+.+. +.|+|+ .|+++. ++++++
T Consensus 126 L~~~s~~v~~~~~~~~~l~~vA~tsl~sK~i~~~~~~l~~l~~dav~~V~~~~~~~~d~~~I~I~k~~Ggs~~-ds~lv~ 204 (515)
T 3iyg_E 126 LDKISDSVLVDMKNTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMQRRDVDFELIKVEGKVGGRLE-DTKLIK 204 (515)
T ss_pred HHHhceecCCCccCHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHhhcccccCCCCcccEEEEEecCCCcc-cceEEe
Confidence 999998875 368899999999875 357899999999988641 236665 577765 689999
Q ss_pred eEEEecccCCCcccccccc-cceeecCeEEEe-----cccccCCHHHH-----------HHHHHHHHHcCCCEEEEecCc
Q 012945 145 GMKLEWGLKSPYFFTHKNK-KECVLDGALVLI-----YDTKISNSNVI-----------RQASLPCMMQGQSLLVVAEDV 207 (453)
Q Consensus 145 G~~~~~g~~~p~~~~~~~~-~~~~l~~p~Ili-----~d~~i~~~~~i-----------~~~le~i~~~~~~lvii~~~i 207 (453)
||+|+++|.||||+++.++ +...++.|+.+. ++.+|++++++ .++++++.++|+||||++++|
T Consensus 205 G~~~dk~~~~~~m~~~~~~~kIall~~~le~~k~~~~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I 284 (515)
T 3iyg_E 205 GVIVDKDFSHPQMPKQVEDAKIAILTCPFEPPKPKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGF 284 (515)
T ss_pred eEEEecccccccccccCCCceEEEEcCccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCC
Confidence 9999999999999876543 233445554443 33457777765 678999999999999999999
Q ss_pred chhhhhhHHhhhccCCcceEEEEccCcccchhhHHHHHHHHhCCEEeeCCCCCCccCCCCCCceeeeEEEE-----ecce
Q 012945 208 ENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA-----TMDN 282 (453)
Q Consensus 208 ~~~al~~l~~n~~~~~~~i~avk~~~~~~~r~~~Le~la~~tG~~i~~~~~~~~~~~~~~~~LG~~~~v~i-----~~~~ 282 (453)
+++|+++|+.|+ |.+++++ ++.+|+|||++|||+++++ ++++++++||+|++|++ ++++
T Consensus 285 ~~~al~~L~~~~------I~~v~~v-----~k~~le~ia~~tGa~ii~~-----l~~l~~~~LG~a~~v~~~~ig~~k~~ 348 (515)
T 3iyg_E 285 DDEANHLLLQND------LPAVRWV-----GGPEIELIAIATGGRIVPR-----FSELTAEKLGFAGLVKEISFGTTKDK 348 (515)
T ss_pred CHHHHHHHHHCC------CEEEecc-----CHHHHHHHHHHhCCEEecc-----cccCCHHHCCcceEEEEEEeccccce
Confidence 999999999875 6688865 3578999999999999996 89999999999999986 4489
Q ss_pred EEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHHcC-Cc
Q 012945 283 VVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IV 361 (453)
Q Consensus 283 ~~~~~g~~~~~~i~~r~~~l~~~~~~~~s~~l~eRl~~l~g~~~tI~vrG~t~~~l~E~er~i~DAl~~~~~al~~g-vV 361 (453)
+++|+||+++. .|||+|||+|+++++|+||+++||||++|+++++| +|
T Consensus 349 ~~~~~g~~~~~-------------------------------~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iV 397 (515)
T 3iyg_E 349 MLVIEQCKNSR-------------------------------AVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVV 397 (515)
T ss_pred EEEEEcCCCCc-------------------------------eEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHhcCCcC
Confidence 99999998763 48999999999999999999999999999999999 99
Q ss_pred CChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc----CCCCeeEeCCCCccc
Q 012945 362 PGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ----DSSDLGYNPARGLFF 435 (453)
Q Consensus 362 pGGGa~e~~~s~~L~~~~~~-~~~e~~g~~~~a~AL~~~p~~La~NaG~d~~~v-~~l~~~----~~~~~G~d~~~~~~~ 435 (453)
||||++|++++++|++++.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+|++.
T Consensus 398 pGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~ 477 (515)
T 3iyg_E 398 YGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALAENSGMNPIQTMTEVRARQVKEVNPALGIDCLHKGTN 477 (515)
T ss_pred CCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCCCeeeEecCCCccc
Confidence 99999999999999999875 899999999999999999999999999999999 999862 456899999999999
Q ss_pred chhhcceeeccCcCcc
Q 012945 436 QIKKIKSKKAWCFPMF 451 (453)
Q Consensus 436 dm~~~gi~ep~~~~~~ 451 (453)
||++.|||||+.||..
T Consensus 478 d~~~~gI~dp~~vk~~ 493 (515)
T 3iyg_E 478 DMKHQHVIETLIGKKQ 493 (515)
T ss_pred chHhccCEEcHHHHHH
Confidence 9999999999999864
No 18
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=4.4e-82 Score=672.72 Aligned_cols=386 Identities=18% Similarity=0.221 Sum_probs=353.2
Q ss_pred HHHHhhhccccCccccccccchhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012945 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (453)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~~~~~~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~-g~~P~~I~~G~~~a~~~~~~~ 83 (453)
..+|||+|++.||+||++ +++|++||+++||||||+||||++||++|+++++ |+||+.|++||++|++.++++
T Consensus 63 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~ 136 (543)
T 1a6d_B 63 GVTILKEMDVEHPAAKMM------VEVSKTQDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRV 136 (543)
T ss_dssp HHHHHHHSCCCSHHHHHH------HHHHTCTTCCCTTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhccchHHHHH------HHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999998 4899999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccCC--HHHHHHHHHHhcC------CChhHHHHHHHHHHhhccC--Cc-------eeee--cCCcccceeEEEe
Q 012945 84 LDCQARKITT--FEEIAQVGTTAAN------GDGEIGELIAKVFEKGWEN--DL-------ITIF--DRKALYNELNFVK 144 (453)
Q Consensus 84 L~~~s~~v~~--~~~l~~va~~s~~------~~~~la~li~~A~~~vg~~--~~-------I~v~--~g~~~~d~~~lv~ 144 (453)
|+++++|++. .++|.++|+||.+ +++.|++++++|+.+++++ |. |+|+ +|++.. ++++++
T Consensus 137 L~~~a~~v~~~~~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~-ds~lv~ 215 (543)
T 1a6d_B 137 IDEISTKIGADEKALLLKMAQTSLNSKSASVAKDKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKKQGGAID-DTQLIN 215 (543)
T ss_dssp HHHHCEECCTTHHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHHHHHEEECSSSEEECGGGEEEEEEESSCGG-GCEEES
T ss_pred HHHhcCCCCCCCHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHhcccccCCcccccceEEEEEecCCCcc-ceeEEc
Confidence 9999999873 7899999997753 3578999999999999875 52 7777 788875 679999
Q ss_pred eEEEecccCCCcccccccccceeecCeEEEecccc-------------cCCHHHH-----------HHHHHHHHHcCCCE
Q 012945 145 GMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVI-----------RQASLPCMMQGQSL 200 (453)
Q Consensus 145 G~~~~~g~~~p~~~~~~~~~~~~l~~p~Ili~d~~-------------i~~~~~i-----------~~~le~i~~~~~~l 200 (453)
||+|+++|.||||+ ..++||+|+++|++ |++++++ .++++++.+.|+||
T Consensus 216 G~v~dk~~~~~~m~-------~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~l 288 (543)
T 1a6d_B 216 GIIVDKEKVHPGMP-------DVVKDAKIALLDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANV 288 (543)
T ss_dssp EEEESCCCSSTTSC-------SEEEEEEEEEESSCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred cEEEecCCCCCCCc-------ceecCCeEEEEecccccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCE
Confidence 99999999999994 26899999999998 6666664 78999999999999
Q ss_pred EEEecCcchhhhhhHHhhhccCCcceEEEEccCcccchhhHHHHHHHHhCCEEeeCCCCCCccCCCCCCceeeeEEEE--
Q 012945 201 LVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA-- 278 (453)
Q Consensus 201 vii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~~~~r~~~Le~la~~tG~~i~~~~~~~~~~~~~~~~LG~~~~v~i-- 278 (453)
||++++|+++|+++|..| +|+||++ .++++|+|||++|||+++++ ++++++++||+|++|++
T Consensus 289 vi~~~~I~~~al~~L~~~------~I~av~~-----v~k~~le~ia~~tGa~iis~-----l~~l~~~~LG~a~~v~~~~ 352 (543)
T 1a6d_B 289 VITQKGIDDMAQHYLSRA------GIYAVRR-----VKKSDMDKLAKATGASIVST-----IDEISSSDLGTAERVEQVK 352 (543)
T ss_dssp EEESSCBCHHHHHHHHHT------TCEEECS-----CCHHHHHHHHHHHTCCEESC-----GGGCCGGGCEEEEEEEEEE
T ss_pred EEECCCcCHHHHHHHHHC------CeeEecc-----CCHHHHHHHHHHhCCceecc-----cccCCHHHCCCceEEEEEE
Confidence 999999999999999986 4789974 67789999999999999996 89999999999999986
Q ss_pred -ecceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHH
Q 012945 279 -TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKE 357 (453)
Q Consensus 279 -~~~~~~~~~g~~~~~~i~~r~~~l~~~~~~~~s~~l~eRl~~l~g~~~tI~vrG~t~~~l~E~er~i~DAl~~~~~al~ 357 (453)
+++++++++||+++ +.|||+|||+|+++++|+||++|||||++|++++
T Consensus 353 ig~~~~~~~~g~~~~-------------------------------~~~TI~lrG~t~~~l~E~er~l~DAl~~~r~a~~ 401 (543)
T 1a6d_B 353 VGEDYMTFVTGCKNP-------------------------------KAVSILVRGETEHVVDEMERSITDSLHVVASALE 401 (543)
T ss_dssp ETTEEEEEEEEESSS-------------------------------SCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCceEEEEecCCCC-------------------------------ceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 48899999998764 5699999999999999999999999999999999
Q ss_pred cC-CcCChhHHHHHHHHHHHhhcC-CChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCC
Q 012945 358 EG-IVPGSGVALLYASKELDKLQT-TNSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPAR 431 (453)
Q Consensus 358 ~g-vVpGGGa~e~~~s~~L~~~~~-~~~~e~~g~~~~a~AL~~~p~~La~NaG~d~~~v-~~l~~~---~~~~~G~d~~~ 431 (453)
+| +|||||++|++++.+|++++. .++++|+++++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+
T Consensus 402 ~~~ivpGGGa~e~~~s~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~ 481 (543)
T 1a6d_B 402 DGAYAAGGGATAAEIAFRLRSYAQKIGGRQQLAIEKFADAIEEIPRALAENAGLDPIDILLKLRAEHAKGNKTYGINVFT 481 (543)
T ss_dssp HCEEEETTTHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHTHHHHHHHHHHTCCHHHHHHHHHHHHHTTCTTEEEETTT
T ss_pred CCCccCCccHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHhCCCCCeeEeCCC
Confidence 99 999999999999999999976 4889999999999999999999999999999999 999863 45689999999
Q ss_pred CcccchhhcceeeccCcCcc
Q 012945 432 GLFFQIKKIKSKKAWCFPMF 451 (453)
Q Consensus 432 ~~~~dm~~~gi~ep~~~~~~ 451 (453)
|++.||++.|||||+.+|..
T Consensus 482 g~~~d~~~~gI~dp~~vk~~ 501 (543)
T 1a6d_B 482 GEIEDMVKNGVIEPIRVGKQ 501 (543)
T ss_dssp TEEEETTTTTCEEEHHHHHH
T ss_pred CcccchhhcCceecHHHHHH
Confidence 99999999999999999864
No 19
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=6.1e-81 Score=660.05 Aligned_cols=392 Identities=14% Similarity=0.181 Sum_probs=344.2
Q ss_pred HHHHhhhccccCccccccccchhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012945 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (453)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~~~~~~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~-g~~P~~I~~G~~~a~~~~~~~ 83 (453)
..+|||+|++.||+||++ +++|++||+++||||||+||||++||++|.++++ |+||+.|++||++|++.++++
T Consensus 53 G~tIlk~i~v~hP~Akll------~e~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~ 126 (512)
T 3iyg_Q 53 AATILRELEVQHPAAKMI------VMASHMQEQEVGDGTNFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHEI 126 (512)
T ss_pred HHHHHHHcccCCHHHHHH------HHHHHHhhhhhCCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999998 4899999999999999999999999999999999 999999999999999999999
Q ss_pred Hhcc----ccccCCHHHHHHHHHHhcCC-----ChhHHHHHHHHHHhhccC-Cceeee-------cCCcccceeEEEeeE
Q 012945 84 LDCQ----ARKITTFEEIAQVGTTAANG-----DGEIGELIAKVFEKGWEN-DLITIF-------DRKALYNELNFVKGM 146 (453)
Q Consensus 84 L~~~----s~~v~~~~~l~~va~~s~~~-----~~~la~li~~A~~~vg~~-~~I~v~-------~g~~~~d~~~lv~G~ 146 (453)
|+++ +.++++.++|.++|++|+++ +++|++++++|+.+++++ +.|.++ .|+++ +++++++||
T Consensus 127 L~~~~~~~~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~livdAv~~V~~~~~~i~v~~I~i~k~~Ggs~-~ds~lv~G~ 205 (512)
T 3iyg_Q 127 LPDLVCCSAKNLRDVDEVSSLLHTSVMSKQYGNEVFLAKLIAQACVSIFPDSGHFNVDNIRVCKILGSGV-HSSSVLHGM 205 (512)
T ss_pred HHHhhcccCCCCCCHHHHHHHHHHHhCCCCccchHHHHHHHHHHHHHHhccCCcccHhHeeEeeccCCCc-ccceEEeeE
Confidence 9998 56777889999999999876 688999999999999876 444443 37776 679999999
Q ss_pred EEecccCCCcccccccccc-eeecCeE-EEecccc----cCCHHHHHHH-------HH----HHHHcCCCEEEEecCcch
Q 012945 147 KLEWGLKSPYFFTHKNKKE-CVLDGAL-VLIYDTK----ISNSNVIRQA-------SL----PCMMQGQSLLVVAEDVEN 209 (453)
Q Consensus 147 ~~~~g~~~p~~~~~~~~~~-~~l~~p~-Ili~d~~----i~~~~~i~~~-------le----~i~~~~~~lvii~~~i~~ 209 (453)
+|+++|.+ |+++.++.. ..++.|+ +..++.+ |++++++.++ |+ ++.++|+||||++++|++
T Consensus 206 ~~dk~~~~--~~~~~~n~kI~ll~~~le~~~~e~k~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~ 283 (512)
T 3iyg_Q 206 VFKKETEG--DVTSVKDAKIAVYSCPFDGMITETKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVAD 283 (512)
T ss_pred EEecCcCC--CCcccccCceEEEecccccccccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccH
Confidence 99999987 665444222 2345554 5555555 7788888776 55 788999999999999999
Q ss_pred hhhhhHHhhhccCCcceEEEEccCcccchhhHHHHHHHHhCCEEeeCCCCCCccCCCCCCceeeeEEEE---ecceEEEE
Q 012945 210 EVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA---TMDNVVII 286 (453)
Q Consensus 210 ~al~~l~~n~~~~~~~i~avk~~~~~~~r~~~Le~la~~tG~~i~~~~~~~~~~~~~~~~LG~~~~v~i---~~~~~~~~ 286 (453)
.++++|.. .+|++||+|++ .+|+|||++|||+++++ ++++++++||+|++|++ +++++++|
T Consensus 284 la~~~l~k------~~I~av~~~~~-----~dle~ia~~tGa~iis~-----l~~~~~~~LG~a~~v~~~~~g~~~~~~~ 347 (512)
T 3iyg_Q 284 MALHYANK------YNIMLVRLNSK-----WDLRRLCKTVGATALPR-----LNPPVLEEMGHCDSVYLSEVGDTQVVVF 347 (512)
T ss_pred HHHHHHHH------CCeEEEEeCCH-----HHHHHHHHHhCCEEecc-----cccCCHHHCCcccEEEEEEeCCeEEEEE
Confidence 99987763 47999999864 44999999999999996 89999999999999975 46688999
Q ss_pred cCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHHcC-CcCChh
Q 012945 287 GGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEEG-IVPGSG 365 (453)
Q Consensus 287 ~g~~~~~~i~~r~~~l~~~~~~~~s~~l~eRl~~l~g~~~tI~vrG~t~~~l~E~er~i~DAl~~~~~al~~g-vVpGGG 365 (453)
.+|+. +|++|||+|||+|+++++|+||++|||||++|+++++| +|||||
T Consensus 348 ~~~~~------------------------------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGG 397 (512)
T 3iyg_Q 348 KHEKE------------------------------DGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGG 397 (512)
T ss_pred EcccC------------------------------CCceEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCc
Confidence 98743 35789999999999999999999999999999999999 999999
Q ss_pred HHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCC--cccchh
Q 012945 366 VALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARG--LFFQIK 438 (453)
Q Consensus 366 a~e~~~s~~L~~~~~~-~~~e~~g~~~~a~AL~~~p~~La~NaG~d~~~v-~~l~~~---~~~~~G~d~~~~--~~~dm~ 438 (453)
++|+++|++|++++.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+| ++.||+
T Consensus 398 a~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~~~g~~~d~~ 477 (512)
T 3iyg_Q 398 ATEIELAKQITSYGETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGLDIEAEVPAVKDML 477 (512)
T ss_pred HHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCcEEEecCCCCCcccchH
Confidence 9999999999999875 899999999999999999999999999999999 999873 567899999965 999999
Q ss_pred hcceeeccCcCcc
Q 012945 439 KIKSKKAWCFPMF 451 (453)
Q Consensus 439 ~~gi~ep~~~~~~ 451 (453)
+.|||||+.||..
T Consensus 478 ~~gI~dp~~vk~~ 490 (512)
T 3iyg_Q 478 EAGVLDTYLGKYW 490 (512)
T ss_pred hccCeEcHHHHHH
Confidence 9999999999864
No 20
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.8e-80 Score=656.43 Aligned_cols=386 Identities=10% Similarity=0.145 Sum_probs=344.6
Q ss_pred HHHHhhhccccCccccccccchhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012945 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (453)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~~~~~~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~-g~~P~~I~~G~~~a~~~~~~~ 83 (453)
..+|||+|++.||+||++ +++|++||+++||||||+|+||++||++|+++++ |+||+.|++||++|++.++++
T Consensus 51 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvvLAgeLL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~ 124 (515)
T 3iyg_G 51 GNAILREIQVQHPAAKSM------IEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMIST 124 (515)
T ss_pred HHHHHHhcccCCHHHHHH------HHHHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999998 3899999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--CHHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccC--C--------ceeee--cCCcccceeEEE
Q 012945 84 LDCQARKIT--TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN--D--------LITIF--DRKALYNELNFV 143 (453)
Q Consensus 84 L~~~s~~v~--~~~~l~~va~~s~~~------~~~la~li~~A~~~vg~~--~--------~I~v~--~g~~~~d~~~lv 143 (453)
|++++.|++ +.+.|.++|++|+++ .+.+++++++|+..+.++ + .|+|+ +|++. ++++++
T Consensus 125 L~~~s~~v~~~~~~~l~~va~tsl~sK~i~~~~~~~~~i~vdav~~V~~~~~~~~~~dl~~~I~I~ki~Ggs~-~ds~lv 203 (515)
T 3iyg_G 125 LKKISIPVDTSNRDTMLNIINSSITTKVISRWSSLACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGII-EDSCVL 203 (515)
T ss_pred HHHhhcccCCCCHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHhcccccCCCcccchhheeEEEEecCCCc-ccceEE
Confidence 999999887 468999999999864 235778999999988622 2 14554 57776 479999
Q ss_pred eeEEEecccCCCcccccccccceeecCeEEEeccc-------------ccCCHHHHHHHHH-----------HHHHcCCC
Q 012945 144 KGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDT-------------KISNSNVIRQASL-----------PCMMQGQS 199 (453)
Q Consensus 144 ~G~~~~~g~~~p~~~~~~~~~~~~l~~p~Ili~d~-------------~i~~~~~i~~~le-----------~i~~~~~~ 199 (453)
+||+|+++|.||.|+ ..++||+|+++|+ +|++++++.++++ ++.+.|.+
T Consensus 204 ~G~v~dk~~~~~~m~-------~~ien~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~ 276 (515)
T 3iyg_G 204 RGVMINKDVTHPRMR-------RYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPD 276 (515)
T ss_pred eeEEEeCCCCCCCCc-------ceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 999999999999774 4799999999998 5778888888777 78888888
Q ss_pred EEEEecCcchhhhhhHHhhhccCCcceEEEEccCcccchhhHHHHHHHHhCCEEeeCCCCCCccCCCCCCcee-eeEEEE
Q 012945 200 LLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGS-CKRVIA 278 (453)
Q Consensus 200 lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~~~~r~~~Le~la~~tG~~i~~~~~~~~~~~~~~~~LG~-~~~v~i 278 (453)
+||+.++|++.++++|..+ +|++++ +.++++|+|||++|||+++++ ++++++++||+ |+.|++
T Consensus 277 vIi~~~~I~~~al~~L~~~------~I~av~-----~~~k~~leria~~tGa~ii~~-----l~~l~~~~LG~~a~~v~~ 340 (515)
T 3iyg_G 277 VVITEKGISDLAQHYLMRA------NITAIR-----RVRKTDNNRIARACGARIVSR-----PEELREEDVGTGAGLLEI 340 (515)
T ss_pred EEEECCccCHHHHHHHHHC------Cceeec-----cCCHHHHHHHHHHhCCeeecc-----ccccChhhcCCcccEEEE
Confidence 8888889999999988753 578886 567789999999999999996 89999999999 999975
Q ss_pred ---ecceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHH
Q 012945 279 ---TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAA 355 (453)
Q Consensus 279 ---~~~~~~~~~g~~~~~~i~~r~~~l~~~~~~~~s~~l~eRl~~l~g~~~tI~vrG~t~~~l~E~er~i~DAl~~~~~a 355 (453)
++++++||+||+++. .|||+|||+|+++++|+||++|||||++|++
T Consensus 341 ~~~g~~~~~~i~g~~~~~-------------------------------~~TIllrG~t~~~l~E~er~i~Dal~~~r~~ 389 (515)
T 3iyg_G 341 KKIGDEYFTFITECKDPK-------------------------------ACTILLRGASKEILSEVERNLQDAMQVCRNV 389 (515)
T ss_pred EEECCceEEEEeCCCCCC-------------------------------eEEEEEcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 456899999998763 5899999999999999999999999999999
Q ss_pred HHc-CCcCChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc----CCCCeeEe
Q 012945 356 KEE-GIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ----DSSDLGYN 428 (453)
Q Consensus 356 l~~-gvVpGGGa~e~~~s~~L~~~~~~-~~~e~~g~~~~a~AL~~~p~~La~NaG~d~~~v-~~l~~~----~~~~~G~d 428 (453)
+++ ++|||||++|+++|++|++++.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.++|||
T Consensus 390 ~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~eq~~i~~~a~Ale~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d 469 (515)
T 3iyg_G 390 LLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVN 469 (515)
T ss_pred hhCCcEEeCCCHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCceeee
Confidence 976 69999999999999999999765 899999999999999999999999999999999 999873 24579999
Q ss_pred CCCCcccchhhcceeeccCcCcc
Q 012945 429 PARGLFFQIKKIKSKKAWCFPMF 451 (453)
Q Consensus 429 ~~~~~~~dm~~~gi~ep~~~~~~ 451 (453)
+.+|++.||++.|||||+.||..
T Consensus 470 ~~~g~~~d~~~~gi~dp~~vk~~ 492 (515)
T 3iyg_G 470 GETGTLVDMKELGIWEPLAVKLQ 492 (515)
T ss_pred CCCCcccccHHcCCEEcHHHHHH
Confidence 99999999999999999999864
No 21
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=4.7e-82 Score=672.48 Aligned_cols=388 Identities=15% Similarity=0.134 Sum_probs=346.4
Q ss_pred HHHHhhhccccCccccccccchhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012945 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (453)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~~~~~~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~-g~~P~~I~~G~~~a~~~~~~~ 83 (453)
..+|||+|++.||+||++ +++|++||+++||||||+||||++||++|+++++ |+||+.|++||++|++.++++
T Consensus 66 G~TIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~ 139 (550)
T 3p9d_G 66 GATILKLLDVVHPAAKTL------VDISRAQDAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEK 139 (550)
T ss_dssp HHHHTTTSCCCSHHHHHH------HHHHHHHHTTTSSCHHHHHHHHHHHHHTTSHHHHSSSCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCCCHHHHHH------HHHHHHhhhhhCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999998 4899999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC--C---HHHHHHHHHHhcC------CChhHHHHHHHHHHhhcc-C------CceeeecCCcccceeEEEee
Q 012945 84 LDCQARKIT--T---FEEIAQVGTTAAN------GDGEIGELIAKVFEKGWE-N------DLITIFDRKALYNELNFVKG 145 (453)
Q Consensus 84 L~~~s~~v~--~---~~~l~~va~~s~~------~~~~la~li~~A~~~vg~-~------~~I~v~~g~~~~d~~~lv~G 145 (453)
|+++++|++ + .+.|.++|+||++ +++.|++++++|+.++++ + +.++++ |+++.| +++++|
T Consensus 140 L~~~s~~v~~~~~~~~~~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~dl~~I~Vikv~-Gg~~~d-s~lv~G 217 (550)
T 3p9d_G 140 INELAVDITSEKSSGRELLERCARTAMSSKLIHNNADFFVKMCVDAVLSLDRNDLDDKLIGIKKIP-GGAMEE-SLFING 217 (550)
T ss_dssp HHHSEECCCCC------CHHHHHHHHHHHTTTGGGHHHHHHHHHHHHHHCCSSSCCGGGCCCCBCC-SSCGGG-CCCCSS
T ss_pred HHHhcccCCCCcchhHHHHHHHHHHhccCccccccHhHHHHHHHHHHHHhCccccCchheeEEEec-CCCccc-eeEEee
Confidence 999999986 3 6789999998864 367899999999999984 3 344554 777765 699999
Q ss_pred EEEecccCCCcccccccccceeecCeEEEecccc-------------cCCHHHHH-----------HHHHHHHHcCCCEE
Q 012945 146 MKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK-------------ISNSNVIR-----------QASLPCMMQGQSLL 201 (453)
Q Consensus 146 ~~~~~g~~~p~~~~~~~~~~~~l~~p~Ili~d~~-------------i~~~~~i~-----------~~le~i~~~~~~lv 201 (453)
|+|+++|.||||++.|+ .++||+|+++|++ |++++++. ++++++.++|++||
T Consensus 218 ~~~dk~~~s~yf~~~~~----~~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~vV 293 (550)
T 3p9d_G 218 VAFKKTFSYAGFEQQPK----KFNNPKILSLNVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIV 293 (550)
T ss_dssp EEECCCSSCTTCSCSCS----CCSSCCEEEECSCCSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCSEE
T ss_pred EEEeccccccccccCcc----cccCceEEEeccccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 99999999999988776 4999999999997 45555554 46778899999999
Q ss_pred EEecCcchhhhhhHHhhhccCCcceEEEEccCcccchhhHHHHHHHHhCCEEeeCCCCCCccCCCCCCceeeeEEEE---
Q 012945 202 VVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA--- 278 (453)
Q Consensus 202 ii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~~~~r~~~Le~la~~tG~~i~~~~~~~~~~~~~~~~LG~~~~v~i--- 278 (453)
|++++|++.++++|..+ +|+++++ .++++|+|||++|||+++++ ++++++++||+|+.|++
T Consensus 294 i~~~~I~dla~~~L~~~------gI~~v~~-----v~k~~lerIa~~tGa~iis~-----l~~l~~~~LG~a~~v~~~~i 357 (550)
T 3p9d_G 294 LSKLPIGDLATQFFADR------NIFCAGR-----VSADDMNRVIQAVGGSIQST-----TSDIKPEHLGTCALFEEMQI 357 (550)
T ss_dssp EESSCCCHHHHHTTGGG------TCEEEEC-----CCTTHHHHHHHHTCCCCBSS-----GGGCCGGGCCCCSBCCCCCC
T ss_pred EECCCccHHHHHHHHHc------CCccccC-----cCHHHHHHHHHHhCCceecc-----hhhCCHHHcCCceEEEEEEe
Confidence 99999999998877632 5778874 56688999999999999996 89999999999999975
Q ss_pred ecceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHHc
Q 012945 279 TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE 358 (453)
Q Consensus 279 ~~~~~~~~~g~~~~~~i~~r~~~l~~~~~~~~s~~l~eRl~~l~g~~~tI~vrG~t~~~l~E~er~i~DAl~~~~~al~~ 358 (453)
++++++++.||+++ +.|||+|||+|+++++|+||++|||||++|+++++
T Consensus 358 g~e~~~~~~g~~~~-------------------------------~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~ 406 (550)
T 3p9d_G 358 GSERYNLFQGCPQA-------------------------------KTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQN 406 (550)
T ss_dssp SSSCCEEEBCCTTC-------------------------------CCCCCCBCSSSHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCeEEEEEecCCCC-------------------------------ceeEEEEeCCcHHHHHHHHHHHHhHHHHHHHHHhc
Confidence 68899999998765 46899999999999999999999999999999999
Q ss_pred C-CcCChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCC
Q 012945 359 G-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARG 432 (453)
Q Consensus 359 g-vVpGGGa~e~~~s~~L~~~~~~-~~~e~~g~~~~a~AL~~~p~~La~NaG~d~~~v-~~l~~~---~~~~~G~d~~~~ 432 (453)
| +|||||++|+++|++|++++.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. +++++|||+.+|
T Consensus 407 g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g 486 (550)
T 3p9d_G 407 KLIVAGGGATEMEVSKCLRDYSKTIAGKQQMIINAFAKALEVIPRQLCENAGFDAIEILNKLRLAHSKGEKWYGVVFETE 486 (550)
T ss_dssp CCEEETTTHHHHHHHHHHHHHHHTCCSTTHHHHHHHHHHHTHHHHHHHHTSCSCHHHHHHHHHHHHHHSCSCCCBCSSSS
T ss_pred CCcccCCCHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeeeCCCC
Confidence 8 9999999999999999998764 899999999999999999999999999999999 999773 467899999999
Q ss_pred cccchhhcceeeccCcCcc
Q 012945 433 LFFQIKKIKSKKAWCFPMF 451 (453)
Q Consensus 433 ~~~dm~~~gi~ep~~~~~~ 451 (453)
++.||++.|||||+.||..
T Consensus 487 ~~~dm~~~gI~dp~~vk~~ 505 (550)
T 3p9d_G 487 NIGDNFAKFVWEPALVKIN 505 (550)
T ss_dssp SBCCHHHHTCEEEHHHHHH
T ss_pred cccchHhccCEecHHHHHH
Confidence 9999999999999999864
No 22
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=5.8e-81 Score=665.63 Aligned_cols=392 Identities=18% Similarity=0.189 Sum_probs=344.6
Q ss_pred HHHHhhhccccCccccccccchhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012945 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (453)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~~~~~~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~-g~~P~~I~~G~~~a~~~~~~~ 83 (453)
..+|||+|++.||+||++ +++|++||+++||||||+||||++||++|+++++ |+||+.|++||++|++.++++
T Consensus 87 G~tIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 160 (562)
T 3p9d_E 87 GATILSQMELDNEIAKLL------VQLSKSQDDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISK 160 (562)
T ss_dssp HHHHHHHSCCCSHHHHHH------HHHHHHHHHHTSSCTTHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCCCHHHHHH------HHHHHHHHhhcCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999998 4899999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccCCH------HHHHHHHHHhcCC------ChhHHHHHHHHHHhhccC-------Cceeee--cCCcccceeEE
Q 012945 84 LDCQARKITTF------EEIAQVGTTAANG------DGEIGELIAKVFEKGWEN-------DLITIF--DRKALYNELNF 142 (453)
Q Consensus 84 L~~~s~~v~~~------~~l~~va~~s~~~------~~~la~li~~A~~~vg~~-------~~I~v~--~g~~~~d~~~l 142 (453)
|+++++|+++. +.|.++|+||+++ .+.|++++++|+..+.+. +.|+|+ .|+++. ++++
T Consensus 161 L~~~s~~v~~~~~~~~~e~L~~vA~tSl~sK~i~~~~d~la~l~vdAV~~V~~~~~~~~d~~~I~I~k~~Ggs~~-ds~l 239 (562)
T 3p9d_E 161 LEETCDDISASNDELFRDFLLRAAKTSLGSKIVSKDHDRFAEMAVEAVINVMDKDRKDVDFDLIKMQGRVGGSIS-DSKL 239 (562)
T ss_dssp TTTTTSSSSBCCCSSCHHHHHHHHHHHHSSSTTTTTHHHHHHHHHHHHHTSSTTTCSCCCCCCCEEEEESSSCGG-GCEE
T ss_pred HHHhccCcCCCcchhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHheeecccccCCCCcccEEEEEecCCChh-hhce
Confidence 99999988631 6899999999874 357999999999988642 346665 577775 5799
Q ss_pred EeeEEEecccCCCcccccccccceeecCeEEEeccc-------------ccCCHHH-----------HHHHHHHHHHcCC
Q 012945 143 VKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDT-------------KISNSNV-----------IRQASLPCMMQGQ 198 (453)
Q Consensus 143 v~G~~~~~g~~~p~~~~~~~~~~~~l~~p~Ili~d~-------------~i~~~~~-----------i~~~le~i~~~~~ 198 (453)
++|++|+++|.||||+++.+ ....+++|+|+++++ +|+++++ +.++++++.++|+
T Consensus 240 veGmv~dk~~~sp~m~~~~~-~~~~~~~~kIall~~~le~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~ 318 (562)
T 3p9d_E 240 INGVILDKDFSHPQMPKCVL-PKEGSDGVKLAILTCPFEPPKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGA 318 (562)
T ss_dssp ESSEEESSCCCTTSCCC------TTCSSCEECEEESCCSSCCCSSCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred eeeEEEecCCCCCCcCcccc-cccccccceEEEecccccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999987551 111235666666554 3555555 6789999999999
Q ss_pred CEEEEecCcchhhhhhHHhhhccCCcceEEEEccCcccchhhHHHHHHHHhCCEEeeCCCCCCccCCCCCCceeeeEEEE
Q 012945 199 SLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIA 278 (453)
Q Consensus 199 ~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~~~~r~~~Le~la~~tG~~i~~~~~~~~~~~~~~~~LG~~~~v~i 278 (453)
||||++++|+++++++|..|+ |.+++++ ++++|+|||++|||+++++ ++++++++||+|++|++
T Consensus 319 ~vvI~~~~I~~~Al~~L~~~~------I~~v~~v-----~k~~le~ia~~TGa~iis~-----l~~l~~~~LG~a~~v~~ 382 (562)
T 3p9d_E 319 DVVICQWGFDDEANHLLLQND------LPAVRWV-----GGQELEHIAISTNGRIVPR-----FQDLSKDKLGTCSRIYE 382 (562)
T ss_dssp SCCEECSSCCSHHHHHHHTTT------CCCEECC-----CTTTHHHHHHHHCCCEEES-----SSCCCTTSCEECSCEEE
T ss_pred cEEEEeCCCCHHHHHHHHHCC------CEEEecc-----CHHHHHHHHHHhCCEEEec-----cccCCHHHCCcceEEEE
Confidence 999999999999999999875 5678875 3567999999999999996 89999999999999987
Q ss_pred -----ecceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHH
Q 012945 279 -----TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQ 353 (453)
Q Consensus 279 -----~~~~~~~~~g~~~~~~i~~r~~~l~~~~~~~~s~~l~eRl~~l~g~~~tI~vrG~t~~~l~E~er~i~DAl~~~~ 353 (453)
+++++++|+||+++. .|||+|||+|+++++|+||++|||||++|
T Consensus 383 ~~ig~~~~~~~~i~g~~~~~-------------------------------~~TIllrG~te~~l~E~kr~i~DAL~~~r 431 (562)
T 3p9d_E 383 QEFGTTKDRMLIIEQSKETK-------------------------------TVTCFVRGSNKMIVDEAERALHDSLCVVR 431 (562)
T ss_dssp ECCSSSSCCEEEECCCSCCS-------------------------------CCEEEEECTTTTTHHHHTHHHHHHHHHHH
T ss_pred EEeccCCceEEEEecCCCCC-------------------------------eEEEEEeCCCHHHHHHHHHHHHHHHHHHH
Confidence 368999999998763 58999999999999999999999999999
Q ss_pred HHHHcC-CcCChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc----CCCCee
Q 012945 354 AAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ----DSSDLG 426 (453)
Q Consensus 354 ~al~~g-vVpGGGa~e~~~s~~L~~~~~~-~~~e~~g~~~~a~AL~~~p~~La~NaG~d~~~v-~~l~~~----~~~~~G 426 (453)
+++++| +|||||++|++++++|++++.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.++|
T Consensus 432 ~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~G 511 (562)
T 3p9d_E 432 NLVKDSRVVYGGGAAEVTMSLAVSEEADKQRGIDQYAFRGFAQALDTIPMTLAENSGLDPIGTLSTLKSKQLKEKISNIG 511 (562)
T ss_dssp HHHHSCCEEETTTHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHTHHHHHHHHTTTSCHHHHHHHHHHHHHHTTTSSBC
T ss_pred HHHhCCCcCCCCcHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCCcee
Confidence 999999 9999999999999999998765 899999999999999999999999999999999 999862 457899
Q ss_pred EeCCCCcccchhhcceeeccCcCcc
Q 012945 427 YNPARGLFFQIKKIKSKKAWCFPMF 451 (453)
Q Consensus 427 ~d~~~~~~~dm~~~gi~ep~~~~~~ 451 (453)
||+.+|++.||++.|||||+.||..
T Consensus 512 ~d~~~g~~~dm~~~gI~dp~~vk~~ 536 (562)
T 3p9d_E 512 VDCLGYGSNDMKELFVVDPFIGKKQ 536 (562)
T ss_dssp CBTTTTBCCBTTTTTCEEEHHHHHH
T ss_pred EecCCCcccchHhccCEEcHHHHHH
Confidence 9999999999999999999999864
No 23
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=7.3e-82 Score=669.26 Aligned_cols=385 Identities=18% Similarity=0.221 Sum_probs=347.8
Q ss_pred HHHHhhhccccCccccccccchhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcC--CCChHHHHHHHHHHHHHHHH
Q 012945 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG--RANLTGLTQGFRMAADAVVR 82 (453)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~~~~~~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~--g~~P~~I~~G~~~a~~~~~~ 82 (453)
..+|||+|++.||+||++ +++|++||+++||||||+||||++||++|+++++ |+||+.|++||++|++.+++
T Consensus 60 G~tIlk~i~~~hP~Akll------~e~a~~qd~~~GDGTTtavVLA~~Ll~ea~~lv~~~GihP~~I~~G~~~A~~~a~~ 133 (527)
T 3p9d_B 60 GATILKSIPLDNPAAKVL------VNISKVQDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALD 133 (527)
T ss_dssp HHHHHHTCCCCCHHHHHH------HHHHHHHHHHTCSCTTTTTHHHHHHHHHHHHHTC---CCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCHHHHHH------HHHHHHhHhhhCCcHhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 468999999999999998 4899999999999999999999999999999996 99999999999999999999
Q ss_pred HHhccccccCC-----HHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccCC---ceeeec--CCcccceeEEEeeE
Q 012945 83 NLDCQARKITT-----FEEIAQVGTTAANG------DGEIGELIAKVFEKGWEND---LITIFD--RKALYNELNFVKGM 146 (453)
Q Consensus 83 ~L~~~s~~v~~-----~~~l~~va~~s~~~------~~~la~li~~A~~~vg~~~---~I~v~~--g~~~~d~~~lv~G~ 146 (453)
+|+++++++++ .++|.++|++|+++ ++.|++++++|+.++++++ .|+|++ |++. +++++++||
T Consensus 134 ~L~~~s~~v~~~~~~~~~~l~~vA~tSl~sK~~~~~~~~i~~li~dAv~~V~~~~~~~~I~V~k~~gg~~-~ds~lv~G~ 212 (527)
T 3p9d_B 134 ALTKAAVDNSHDKTMFREDLIHIAKTTLSSKILSQDKDHFAELATNAILRLKGSTNLEHIQIIKILGGKL-SDSFLDEGF 212 (527)
T ss_dssp HHHHTCBCCCCCHHHHHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHHHTTCTTCCTTSSCCCBCCCSSS-SCCCEESSC
T ss_pred HHHHhCccCCCcchhhHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHhcccCCcceEEEEEcCCCCc-cccEEEEeE
Confidence 99999999885 68999999999875 5789999999999999886 788874 6555 468999999
Q ss_pred EEecccCCCcccccccccceeecCeEEEecccc--------------cCCHHHH-----------HHHHHHHHHcCCCEE
Q 012945 147 KLEWGLKSPYFFTHKNKKECVLDGALVLIYDTK--------------ISNSNVI-----------RQASLPCMMQGQSLL 201 (453)
Q Consensus 147 ~~~~g~~~p~~~~~~~~~~~~l~~p~Ili~d~~--------------i~~~~~i-----------~~~le~i~~~~~~lv 201 (453)
+||++|.||| |+ .++||+|++++++ +++++++ ++.++.+.++|+|||
T Consensus 213 ~~dk~~~~~~----p~----~~~n~kIlll~~~le~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vv 284 (527)
T 3p9d_B 213 ILAKKFGNNQ----PK----RIENAKILIANTTLDTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTF 284 (527)
T ss_dssp CCSCCCSSSC----CS----CCSSCEEEEECSCSSCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEE
T ss_pred EEecccCCCC----Ce----eeecceEEEeccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 9999999997 33 4689999997764 3445544 678888999999999
Q ss_pred EEecCcchhhhhhHHhhhccCCcceEEEEccCcccchhhHHHHHHHHhCCEEeeCCCCCCccCCCCCCceeeeEEE---E
Q 012945 202 VVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI---A 278 (453)
Q Consensus 202 ii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~~~~r~~~Le~la~~tG~~i~~~~~~~~~~~~~~~~LG~~~~v~---i 278 (453)
|++++|++.++++|..| +|++|++|++ .+|+|||++|||+++++ ++++++++||+|+.|+ +
T Consensus 285 i~~~~I~~~al~~L~~~------~i~av~~~~~-----~dle~ia~~tGa~iv~~-----~~~~~~~~LG~a~~v~~~~i 348 (527)
T 3p9d_B 285 INRQLIYDYPEQLFTDL------GINSIEHADF-----EGVERLALVTGGEVVST-----FDEPSKCKLGECDVIEEIML 348 (527)
T ss_dssp ESSCCCTTTHHHHHHHT------CBCCCCCCHH-----HHHHHHHHHTCCCCCST-----TSCCTTSCEECSBCCBCCCS
T ss_pred EECCCCCHHHHHHHHHC------CCEEEecCCH-----HHHHHHHHHhCCEEecc-----hhhCCHHHCCCCcEEEEEEe
Confidence 99999999999999976 4789998753 45999999999999996 8899999999999997 6
Q ss_pred ecceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHHHHHHHHc
Q 012945 279 TMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHAVQAAKEE 358 (453)
Q Consensus 279 ~~~~~~~~~g~~~~~~i~~r~~~l~~~~~~~~s~~l~eRl~~l~g~~~tI~vrG~t~~~l~E~er~i~DAl~~~~~al~~ 358 (453)
++++++++.||+++ ++|||+|||+|+++++|+||+++||||++|+++++
T Consensus 349 g~~~~~~~~g~~~~-------------------------------~~~tI~lrg~te~~l~E~kr~i~DAl~~~r~av~~ 397 (527)
T 3p9d_B 349 GEQPFLKFSGCKAG-------------------------------EACTIVLRGATDQTLDEAERSLHDALSVLSQTTKE 397 (527)
T ss_dssp SSCCBCCBCSSCCS-------------------------------CCEECBCCTTCTTHHHHHHTHHHHHHHHHHHHHHC
T ss_pred cceEEEEEECCCCC-------------------------------CEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 78899999998654 67999999999999999999999999999999999
Q ss_pred C-CcCChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCeeEeCCCC
Q 012945 359 G-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDLGYNPARG 432 (453)
Q Consensus 359 g-vVpGGGa~e~~~s~~L~~~~~~-~~~e~~g~~~~a~AL~~~p~~La~NaG~d~~~v-~~l~~~---~~~~~G~d~~~~ 432 (453)
| +|||||++|++++++|++++.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++. ++.++|||+.+|
T Consensus 398 g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g 477 (527)
T 3p9d_B 398 TRTVLGGGCAEMVMSKAVDTEAQNIDGKKSLAVEAFARALRQLPTILADNAGFDSSELVSKLRSSIYNGISTSGLDLNNG 477 (527)
T ss_dssp CCEEETTTHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCSHHHHHHHHHHHHHTCSCCCCCSSST
T ss_pred CCcccCCcHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCCCceeEECCCC
Confidence 9 9999999999999999998764 899999999999999999999999999999999 999873 567899999999
Q ss_pred cccchhhcceeeccCcCcc
Q 012945 433 LFFQIKKIKSKKAWCFPMF 451 (453)
Q Consensus 433 ~~~dm~~~gi~ep~~~~~~ 451 (453)
++.||++.|||||+.||..
T Consensus 478 ~~~dm~~~gI~dp~~vk~~ 496 (527)
T 3p9d_B 478 TIADMRQLGIVESYKLKRA 496 (527)
T ss_dssp TCCCHHHHTCEEETTHHHH
T ss_pred CCcchHhccCEEcHHHHHH
Confidence 9999999999999999864
No 24
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=5.2e-80 Score=652.81 Aligned_cols=385 Identities=17% Similarity=0.247 Sum_probs=337.8
Q ss_pred HHHHhhhccccCccccccccchhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012945 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (453)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~~~~~~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~-g~~P~~I~~G~~~a~~~~~~~ 83 (453)
..+|||+|++.||+||++ +++|++||+++||||||+|+||++||++|+++++ |+||+.|++||++|++.++++
T Consensus 52 G~tIlk~i~v~hp~akll------~~~a~~qd~e~GDGTTtvvvLa~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 125 (517)
T 3iyg_Z 52 GNVLLHEMQIQHPTASLI------AKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQF 125 (517)
T ss_pred HHHHHHHccCcCHHHHHH------HHHHHHHHHHhCCCceeHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999998 4899999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC-CHHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccCC------ceeee--cCCcccceeEEEeeEEE
Q 012945 84 LDCQARKIT-TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEND------LITIF--DRKALYNELNFVKGMKL 148 (453)
Q Consensus 84 L~~~s~~v~-~~~~l~~va~~s~~~------~~~la~li~~A~~~vg~~~------~I~v~--~g~~~~d~~~lv~G~~~ 148 (453)
|+++++|++ +.+.|.++|+||+++ .+.|++++++|+..+.+++ .|+|. .|++. +++++++||+|
T Consensus 126 L~~~s~~v~~~~~~L~~va~tsl~sKi~~~~~d~la~l~vdaV~~V~~~~~~~dl~~I~I~k~~Gg~~-~ds~lv~G~v~ 204 (517)
T 3iyg_Z 126 LEQVKVSKEMDRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIKKQDEPIDLFMVEIMEMKHKSE-TDTSLIRGLVL 204 (517)
T ss_pred HHhhCcCCCCCHHHHHHHHHHHhccccchhHHHHHHHHHHHHhheeccCCCcCChhHheeeeecCCCc-cccceEeeEEE
Confidence 999999988 788999999999864 3578999999998885432 24443 45554 57999999999
Q ss_pred ecccCCCcccccccccceeecCeEEEecccccC-------------CHHHHH-----------HHHHHHHH--------c
Q 012945 149 EWGLKSPYFFTHKNKKECVLDGALVLIYDTKIS-------------NSNVIR-----------QASLPCMM--------Q 196 (453)
Q Consensus 149 ~~g~~~p~~~~~~~~~~~~l~~p~Ili~d~~i~-------------~~~~i~-----------~~le~i~~--------~ 196 (453)
+++|.||||+ .+++||+|+++|++++ +++++. ..++.+.. .
T Consensus 205 dk~~~~p~m~-------~~ien~kIll~~~~le~~k~e~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~ 277 (517)
T 3iyg_Z 205 DHGARHPDMK-------KRVEDAYILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDS 277 (517)
T ss_pred eccCCCCCcc-------ccccCCeEEEecccccccccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc
Confidence 9999999974 4789999999998753 333322 23333332 3
Q ss_pred CCCEEEEe-cCcchhhhhhHHhhhccCCcceEEEEccCcccchhhHHHHHHHHhCCEEeeCCCCCCccCCCCCC-ceeee
Q 012945 197 GQSLLVVA-EDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLK-LGSCK 274 (453)
Q Consensus 197 ~~~lvii~-~~i~~~al~~l~~n~~~~~~~i~avk~~~~~~~r~~~Le~la~~tG~~i~~~~~~~~~~~~~~~~-LG~~~ 274 (453)
++|+||++ ++|++.++++|..+ +|+++++. ++.+|+|||++|||+++++ ++++++++ ||+|+
T Consensus 278 ~~~lvIi~~~~I~d~al~~L~~~------gI~~v~~v-----~~~~leria~~tGa~iv~~-----l~~l~~~~~LG~a~ 341 (517)
T 3iyg_Z 278 DKGFVVINQKGIDPFSLDALAKE------GIIALRRA-----KRRNMERLTLACGGIALNS-----LDDLNPDCLLGHAG 341 (517)
T ss_pred CCceEEEecccCCHHHHHHHHHC------CCEEEEec-----CHHHHHHHHHHhCCEEecc-----hhhCcccccCCcce
Confidence 56777665 89999999999864 57899864 4678999999999999996 89999999 99999
Q ss_pred EE---EEecceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHHH
Q 012945 275 RV---IATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALHA 351 (453)
Q Consensus 275 ~v---~i~~~~~~~~~g~~~~~~i~~r~~~l~~~~~~~~s~~l~eRl~~l~g~~~tI~vrG~t~~~l~E~er~i~DAl~~ 351 (453)
| .+++++++||+||++++. |||+|||+|+++++|+||++|||||+
T Consensus 342 -v~e~~ig~~~~~~~~g~~~~~~-------------------------------~TI~lrG~t~~~l~E~kr~l~DAl~~ 389 (517)
T 3iyg_Z 342 -VYEYTLGEEKFTFIEKCNNPRS-------------------------------VTLLIKGPNKHTLTQIKDAIRDGLRA 389 (517)
T ss_pred -EEEEEEcCceEEEEeCCCCchh-------------------------------heeeecCCcHHHHHHHHHHHHHHHHH
Confidence 9 578999999999987643 79999999999999999999999999
Q ss_pred HHHHHHcC-CcCChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc---CCCCe
Q 012945 352 VQAAKEEG-IVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ---DSSDL 425 (453)
Q Consensus 352 ~~~al~~g-vVpGGGa~e~~~s~~L~~~~~~-~~~e~~g~~~~a~AL~~~p~~La~NaG~d~~~v-~~l~~~---~~~~~ 425 (453)
+|+++++| +|||||++|+++|++|++++.. ++++|+|+++|++||+.+|+|||+|||+|+.++ .+|++. ++.++
T Consensus 390 ~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~iP~~La~NaG~d~~~~v~~l~~~h~~~~~~~ 469 (517)
T 3iyg_Z 390 VKNAIDDGCVVPGAGAVEVAMAEALVKYKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEHSESGQLV 469 (517)
T ss_pred HHHHHhcceEecCccHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCcE
Confidence 99999999 9999999999999999999875 899999999999999999999999999999999 999873 46789
Q ss_pred eEeCCCCcccchhhcceeeccCcCcc
Q 012945 426 GYNPARGLFFQIKKIKSKKAWCFPMF 451 (453)
Q Consensus 426 G~d~~~~~~~dm~~~gi~ep~~~~~~ 451 (453)
|||+.+|++.||++.|||||+.||..
T Consensus 470 G~d~~~g~~~d~~~~gI~dp~~vk~~ 495 (517)
T 3iyg_Z 470 GVDLNTGEPMVAAEAGIWDNYCVKKQ 495 (517)
T ss_pred EEeCCCCcccchhhccCeecHHHHHH
Confidence 99999999999999999999999864
No 25
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=1.2e-79 Score=654.26 Aligned_cols=386 Identities=16% Similarity=0.207 Sum_probs=333.9
Q ss_pred HHHHhhhccccCccccccccchhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012945 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (453)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~~~~~~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~-g~~P~~I~~G~~~a~~~~~~~ 83 (453)
..+|||+|++.||+||++ +++|++||+++||||||+||||++||++|+++++ |+||+.|++||++|++.++++
T Consensus 59 G~tIlk~i~v~hP~akll------~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~ 132 (546)
T 3p9d_F 59 GKVLLTEMQIQSPTAVLI------ARAAAAQDEITGDGTTTVVCLVGELLRQAHRFIQEGVHPRIITDGFEIARKESMKF 132 (546)
T ss_dssp HHHHHHTSCCCCHHHHHH------HHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHTTTTBCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCcCHHHHHH------HHHHHHHHHHhCCCcccHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHH
Confidence 468999999999999998 3899999999999999999999999999999999 999999999999999999999
Q ss_pred HhccccccC----CHHHHHHHHHHhcCC------ChhHHHHHHHHHHhhccC-------Cceeee--cCCcccceeEEEe
Q 012945 84 LDCQARKIT----TFEEIAQVGTTAANG------DGEIGELIAKVFEKGWEN-------DLITIF--DRKALYNELNFVK 144 (453)
Q Consensus 84 L~~~s~~v~----~~~~l~~va~~s~~~------~~~la~li~~A~~~vg~~-------~~I~v~--~g~~~~d~~~lv~ 144 (453)
|++++.|++ +.+.|.++|+||+++ .+.|++++++|+..+.+. ..|++. .|++. +++++++
T Consensus 133 L~~~a~~v~~~~~~~~~L~~vA~tsl~sKi~~~~~d~la~l~vdaV~~V~~~~~~~~dl~~I~i~ki~Gg~~-~ds~lv~ 211 (546)
T 3p9d_F 133 LDEFKISKTNLSNDREFLLQVARSSLLTKVDADLTEVLTPIVTDAVLSVYDAQADNLDLHMVEIMQMQHLSP-KDTTFIK 211 (546)
T ss_dssp HHHHCCCCSSSSTTCHHHHHHHHHHTCSTTHHHHCSSHHHHHHHHHHHTHHHHHTTCCGGGEEEECCCCSCT-TTCCCCS
T ss_pred HHHhhccccccccCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhheEeecCCCCcccchheEEEEecCCCc-cccEEEe
Confidence 999999884 678999999999874 457999999999988531 135554 45554 5799999
Q ss_pred eEEEecccCCCcccccccccceeecCeEEEecccccC-------------CHH----------H-HHHHHHHHHH-----
Q 012945 145 GMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKIS-------------NSN----------V-IRQASLPCMM----- 195 (453)
Q Consensus 145 G~~~~~g~~~p~~~~~~~~~~~~l~~p~Ili~d~~i~-------------~~~----------~-i~~~le~i~~----- 195 (453)
||+|+++|.||+|+ .+++||+|+++|++++ +++ + +...++.+..
T Consensus 212 G~v~dk~~~~~~m~-------~~~en~kIll~~~~Le~~k~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v 284 (546)
T 3p9d_F 212 GLVLDHGGRHPDMP-------TRVKNAYVLILNVSLEYEKTEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEV 284 (546)
T ss_dssp SCEESCCCCSSSSC-------SSBCSCCCCEECCCSSSCCCSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC---
T ss_pred eEEEecccccccCc-------ceecCceEEEecCcccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999764 4799999999997653 211 1 2234444443
Q ss_pred ----cCCCEEEEe-cCcchhhhhhHHhhhccCCcceEEEEccCcccchhhHHHHHHHHhCCEEeeCCCCCCccCCCCCCc
Q 012945 196 ----QGQSLLVVA-EDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKL 270 (453)
Q Consensus 196 ----~~~~lvii~-~~i~~~al~~l~~n~~~~~~~i~avk~~~~~~~r~~~Le~la~~tG~~i~~~~~~~~~~~~~~~~L 270 (453)
+|+|+||++ ++|+++|+++|..|+ |+++++. ++.+|+|||++|||+++++ ++++++++|
T Consensus 285 ~~~~~g~~~vIi~~k~I~~~Al~~L~~~g------I~~vr~v-----~~~~leria~~tGa~ii~~-----l~~l~~~~L 348 (546)
T 3p9d_F 285 CGMDPDKGFVIINQKGIDPMSLDVFAKHN------ILALRRA-----KRRNMERLQLVTGGEAQNS-----VEDLSPQIL 348 (546)
T ss_dssp --------CEEEESSCCCHHHHHHHTTTT------CEEECCC-----CHHHHHHHHHTTTBCCCCC-----CSSCSTTCC
T ss_pred hhhccCCceEEEecCcCcHHHHHHHHHCC------CeeEecC-----CHHHHHHHHHHhCCEEecc-----hhhCCHhHC
Confidence 567866655 699999999999874 6888864 4578999999999999996 899999999
Q ss_pred eeeeEE---EEecceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHH
Q 012945 271 GSCKRV---IATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITN 347 (453)
Q Consensus 271 G~~~~v---~i~~~~~~~~~g~~~~~~i~~r~~~l~~~~~~~~s~~l~eRl~~l~g~~~tI~vrG~t~~~l~E~er~i~D 347 (453)
|+|++| .+++++++||+||++++ .|||+|||+|+++++|+||++||
T Consensus 349 G~a~~v~~~~ig~~~~~~i~g~~~~~-------------------------------~~tI~lrG~te~~l~E~kr~l~D 397 (546)
T 3p9d_F 349 GFSGLVYQETIGEEKFTYVTENTDPK-------------------------------SCTILIKGSTHYALAQTKDAVRD 397 (546)
T ss_dssp BCCCCBCBCCCSSCCCEECSSCSCCS-------------------------------CEEEECCCSCHHHHHHHHHHHHH
T ss_pred CcccEEEEEEecCceEEEEecCCCCc-------------------------------eEEEEECCCCHHHHHHHHHHHHH
Confidence 999999 47889999999998764 48999999999999999999999
Q ss_pred HHHHHHHHHHcC-CcCChhHHHHHHHHHHHh---hcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc-
Q 012945 348 ALHAVQAAKEEG-IVPGSGVALLYASKELDK---LQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ- 420 (453)
Q Consensus 348 Al~~~~~al~~g-vVpGGGa~e~~~s~~L~~---~~~~-~~~e~~g~~~~a~AL~~~p~~La~NaG~d~~~v-~~l~~~- 420 (453)
|||++|+++++| +|||||++|+++|++|++ |+.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++.
T Consensus 398 Al~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h 477 (546)
T 3p9d_F 398 GLRAVANVLKDKNIIPGAGAFYIALSRYLRSANMNKLGAKGKTKTGIEAFAEALLVIPKTLVKNSGFDPLDVLAMVEDEL 477 (546)
T ss_dssp HHHHHHHHTTSCCEEETTTHHHHHHHHHHHHHHTTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHH
T ss_pred HHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhhhhhhcCchHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHh
Confidence 999999999998 999999999999999998 5654 899999999999999999999999999999999 999763
Q ss_pred -------CCCCeeEeCCCCcccchhhcceeeccCcCcc
Q 012945 421 -------DSSDLGYNPARGLFFQIKKIKSKKAWCFPMF 451 (453)
Q Consensus 421 -------~~~~~G~d~~~~~~~dm~~~gi~ep~~~~~~ 451 (453)
++.++|||+.+|++.||++.|||||+.||..
T Consensus 478 ~~~~~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~ 515 (546)
T 3p9d_F 478 DDAQDSDETRYVGVDLNIGDSCDPTIEGIWDSYRVLRN 515 (546)
T ss_dssp HHHTTSTTSSCCCCBTTTTBCCCSGGGTCEEEHHHHHH
T ss_pred hhhhcccCCceeeEeCCCCeecchHhccCEecHHHHHH
Confidence 4567999999999999999999999999864
No 26
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=6e-79 Score=650.87 Aligned_cols=386 Identities=14% Similarity=0.153 Sum_probs=343.6
Q ss_pred HHHHhhhccccCccccccccchhhhhhhhhhcccccCCchhHHHhhHHHHHHHHhhcC-CCChHHHHHHHHHHHHHHHHH
Q 012945 5 ACSLASRVRLINTTGTQPVCCTWSRNYGAEDTKRFIDCTKYESVLVKAPNDEAFKALG-RANLTGLTQGFRMAADAVVRN 83 (453)
Q Consensus 5 ~~~il~~~~~~~p~~~~~~~~~~~~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~-g~~P~~I~~G~~~a~~~~~~~ 83 (453)
..+|||+|++.||+||++ +++|++||+++||||||+||||++||++|+++++ |+||+.|++||++|++.++++
T Consensus 68 G~TIlk~i~v~hP~Akll------~e~a~~qd~e~GDGTTtvvvLa~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~e~ 141 (568)
T 3p9d_H 68 AATMLRELDIVHPAVKVL------VMATEQQKIDMGDGTNLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKE 141 (568)
T ss_dssp HHHHTTTCCCCCHHHHHH------HHHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcccCCHHHHHH------HHHHHhhhceeCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999999998 4899999999999999999999999999999999 999999999999999999999
Q ss_pred Hhcccccc----CCHHHHHHHHHHhcC-----CChhHHHHHHHHHHhhccC-----C-------ceeeec--CCccccee
Q 012945 84 LDCQARKI----TTFEEIAQVGTTAAN-----GDGEIGELIAKVFEKGWEN-----D-------LITIFD--RKALYNEL 140 (453)
Q Consensus 84 L~~~s~~v----~~~~~l~~va~~s~~-----~~~~la~li~~A~~~vg~~-----~-------~I~v~~--g~~~~d~~ 140 (453)
|++++.++ ++.+.|.++|++|++ ++++|++++++|+.+++++ + .|+|+. |++.. ++
T Consensus 142 L~~~a~~v~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~dl~~I~I~k~~Ggs~~-dS 220 (568)
T 3p9d_H 142 LDEMVVGEITDKNDKNELLKMIKPVISSKKYGSEDILSELVSEAVSHVLPVAQQAGEIPYFNVDSIRVVKIMGGSLS-NS 220 (568)
T ss_dssp HHHHCCSCCCCCCTTHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHTTSCC---------CCCGGGCEEEEEESSCGG-GC
T ss_pred HHHhccccCCCCCCHHHHHHHHHHHhhccCcchHHHHHHHHHHHHHHHhhccccccCCcccccceEEEEEccCCCcc-hh
Confidence 99999876 567899999998864 2578999999999999874 3 477764 87775 57
Q ss_pred EEEeeEEEecccCCCcccccccccceeec---CeEEEecccc-------------cCCHHHHHH-----------HHHHH
Q 012945 141 NFVKGMKLEWGLKSPYFFTHKNKKECVLD---GALVLIYDTK-------------ISNSNVIRQ-----------ASLPC 193 (453)
Q Consensus 141 ~lv~G~~~~~g~~~p~~~~~~~~~~~~l~---~p~Ili~d~~-------------i~~~~~i~~-----------~le~i 193 (453)
++++|++|+++|. +| +..++ ||+|+++|++ |++++++.+ +++++
T Consensus 221 ~lv~G~v~dk~~~--~m-------~~~i~~~~n~kIlll~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~I 291 (568)
T 3p9d_H 221 TVIKGMVFNREPE--GH-------VKSLSEDKKHKVAVFTCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEI 291 (568)
T ss_dssp EEESSCCBSSCBS--SG-------GGSCCCCSSCEEEEECSCSSSCCCSSSCEEECCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeccEEEeeccc--CC-------cEEEecCCcceEEEEccCccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999974 23 34677 9999999987 666766654 77889
Q ss_pred HHcCCCEEEEecCcchhhhhhHHhhhccCCcceEEEEccCcccchhhHHHHHHHHhCCEEeeCCCCCCccCCCCCCceee
Q 012945 194 MMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSC 273 (453)
Q Consensus 194 ~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~~~~r~~~Le~la~~tG~~i~~~~~~~~~~~~~~~~LG~~ 273 (453)
.+.|+||||++++|++.++++|..+ +|++||+|+ +.+|+|||++|||+++++ ++++++++||+|
T Consensus 292 ~~~g~~vvi~~~~I~~~al~~L~~~------gI~av~~v~-----~~~leria~~tGa~ivs~-----l~~l~~~~LG~a 355 (568)
T 3p9d_H 292 ADMGVECIVAGAGVGELALHYLNRY------GILVLKVPS-----KFELRRLCRVCGATPLPR-----LGAPTPEELGLV 355 (568)
T ss_dssp HHTTCCEEEECSCCCHHHHHHHHHH------TCEEECCCC-----HHHHHHHHHHHSCCCCSS-----SSCCCGGGCEEC
T ss_pred HhcCCeEEEECCCcChHHHHHHHHC------CeEEEecCC-----HHHHHHHHHHhCCEEEec-----cccCCHHHCCcc
Confidence 9999999999999999999999875 589999875 456999999999999996 889999999999
Q ss_pred eEEE---EecceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHhHHHHHHHHHHHHHH
Q 012945 274 KRVI---ATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKAEVREKKLKITNALH 350 (453)
Q Consensus 274 ~~v~---i~~~~~~~~~g~~~~~~i~~r~~~l~~~~~~~~s~~l~eRl~~l~g~~~tI~vrG~t~~~l~E~er~i~DAl~ 350 (453)
+.|+ ++++++++|++|+. |++++|||+|||+|+++++|+||++|||||
T Consensus 356 ~~v~~~~ig~~~~~~~~g~~~-----------------------------l~~~~~TIllrG~t~~~l~E~er~i~DAL~ 406 (568)
T 3p9d_H 356 ETVKTMEIGGDRVTVFKQEQG-----------------------------EISRTSTIILRGATQNNLDDIERAIDDGVA 406 (568)
T ss_dssp SCCCCCEETTEECBCCCCCSS-----------------------------SCCSSCEEEEEESCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEecCceEEEEecCCC-----------------------------CCCCeEEEEECCCcHHHHHHHHHHHHHHHH
Confidence 9986 45689999999862 234679999999999999999999999999
Q ss_pred HHHHHHH--c-CCcCChhHHHHHHHHHHHhhcCC-ChhHHHHHHHHHHHHHHHHHHHHHhcCCChHHH-HHHHhc-----
Q 012945 351 AVQAAKE--E-GIVPGSGVALLYASKELDKLQTT-NSDQKIGVQIVQNALKMAAYLIASNAGVDGSVI-DKLLEQ----- 420 (453)
Q Consensus 351 ~~~~al~--~-gvVpGGGa~e~~~s~~L~~~~~~-~~~e~~g~~~~a~AL~~~p~~La~NaG~d~~~v-~~l~~~----- 420 (453)
++|++++ + ++|||||++|+++|++|++++.. ++++|+|+++|++||+.||++||+|||+|+.++ .+|++.
T Consensus 407 vvr~av~~~d~~iVpGGGa~E~~ls~~L~~~a~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~ 486 (568)
T 3p9d_H 407 AVKGLMKPSGGKLLPGAGATEIELISRITKYGERTPGLLQLAIKQFAVAFEVVPRTLAETAGLDVNEVLPNLYAAHNVTE 486 (568)
T ss_dssp HHHHTTSTTCCCCCCTTTHHHHHHHHHHHHHHHTCCSTHHHHHHHHHHGGGHHHHHHHHHHTCCHHHHHHHHHHCCCCSS
T ss_pred HHHHHhcccCCeEEeCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhc
Confidence 9999999 5 69999999999999999999765 899999999999999999999999999999999 999874
Q ss_pred ------CCCCeeEeCCCCc---ccchhhcceeeccCcCcc
Q 012945 421 ------DSSDLGYNPARGL---FFQIKKIKSKKAWCFPMF 451 (453)
Q Consensus 421 ------~~~~~G~d~~~~~---~~dm~~~gi~ep~~~~~~ 451 (453)
++.++|||+.+|+ +.||++.|||||+.||..
T Consensus 487 ~~~~~~~~~~~G~d~~~g~~~~~~d~~~~gI~dp~~vk~~ 526 (568)
T 3p9d_H 487 PGAVKTDHLYKGVDIDGESDEGVKDIREENIYDMLATKKF 526 (568)
T ss_dssp CCCCCCTTSSSCCCHHHHTCCCCHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCCceeEcccCCCcccccChHHccCEEcHHHHHH
Confidence 3457999999997 999999999999999864
No 27
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.9e-49 Score=357.81 Aligned_cols=189 Identities=38% Similarity=0.559 Sum_probs=185.2
Q ss_pred eEEEeeEEEecccCCCcccccccccceeecCeEEEecccccCCHHHHHHHHHHHHHcCCCEEEEecCcchhhhhhHHhhh
Q 012945 140 LNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDF 219 (453)
Q Consensus 140 ~~lv~G~~~~~g~~~p~~~~~~~~~~~~l~~p~Ili~d~~i~~~~~i~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~ 219 (453)
+++++||.||+||+||||++++++|.++++||+||++|.||++.++++|+||.+.++|+||+|+++|++++||++|+.|+
T Consensus 2 levvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkKIs~i~~ilP~LE~~~~~~kpLlIIAedvegeaLatLvvNk 81 (194)
T 3m6c_A 2 LEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKISSLPDLLPLLEKVAGTGKPLLIVAEDVEGEALATLVVNA 81 (194)
T ss_dssp CCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSEECCHHHHHHHHHHHHHHTCCEEEEESEECHHHHHHHHHHH
T ss_pred eEEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEecccccchhhhhhhhh
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcceEEEEccCcccchhhHHHHHHHHhCCEEeeCCCCCCccCCCCCCceeeeEEEEecceEEEEcCCCChhhHHHHH
Q 012945 220 TCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERC 299 (453)
Q Consensus 220 ~~~~~~i~avk~~~~~~~r~~~Le~la~~tG~~i~~~~~~~~~~~~~~~~LG~~~~v~i~~~~~~~~~g~~~~~~i~~r~ 299 (453)
++|.+++||||+|+||++|+..|+|||.+|||++++.+.|+++++++.++||+|++|.+++++|++++|.+++++|+.|+
T Consensus 82 lrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~T~iv~G~g~~~~I~~Rv 161 (194)
T 3m6c_A 82 IRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGSARRVVVSKDDTVIVDGGGTAEAVANRA 161 (194)
T ss_dssp HHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHH
T ss_pred ccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCCccEEEEcCCceEEecCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhccc----HHHHHHHhhhcCCeEEE
Q 012945 300 EQLRSTIKLSTS----DKLKDRLAKLSGGYAVL 328 (453)
Q Consensus 300 ~~l~~~~~~~~s----~~l~eRl~~l~g~~~tI 328 (453)
++|+++++.++| ++|+||||||+||+|+|
T Consensus 162 ~qIr~~ie~t~s~ydkEKLqERlAkLsGGVAVI 194 (194)
T 3m6c_A 162 KHLRAEIDKSDSDWDREKLGERLAKLAGGVAVI 194 (194)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHHHHHHHBCCC
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHcCCcEEC
Confidence 999999999988 89999999999999875
No 28
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=100.00 E-value=7.3e-48 Score=348.08 Aligned_cols=185 Identities=35% Similarity=0.527 Sum_probs=180.8
Q ss_pred EeeEEEecccCCCcccccccccceeecCeEEEecccccCCHHHHHHHHHHHHHcCCCEEEEecCcchhhhhhHHhhhccC
Q 012945 143 VKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCT 222 (453)
Q Consensus 143 v~G~~~~~g~~~p~~~~~~~~~~~~l~~p~Ili~d~~i~~~~~i~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~ 222 (453)
.+||.||+||+||||++++++|.++++||+||++|.||+++++++|+||.+.++|+||+||++|++++||++|+.|+++|
T Consensus 12 ~~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkKIs~i~~ilP~LE~v~~~~rpLlIIAEDvegEALatLvvNklrg 91 (201)
T 3osx_A 12 SEGMQFDRGYLSPYFINKPESGSVELENPYILLVDKKISNIRELLPVLEGVAKASKPLVIIAEDVEGEALATLVVNNMRG 91 (201)
T ss_dssp CCCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEEECCHHHHHHHHHHHHTSSCCEEEEEEEECHHHHHHHHHHHHHT
T ss_pred ccccEecCccCChheeecccCCEEEecCCeEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEeccccchhhhHHHHhhccc
Confidence 35999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcceEEEEccCcccchhhHHHHHHHHhCCEEeeCCCCCCccCCCCCCceeeeEEEEecceEEEEcCCCChhhHHHHHHHH
Q 012945 223 TEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGGSGELVDIQERCEQL 302 (453)
Q Consensus 223 ~~~i~avk~~~~~~~r~~~Le~la~~tG~~i~~~~~~~~~~~~~~~~LG~~~~v~i~~~~~~~~~g~~~~~~i~~r~~~l 302 (453)
+++|||||+|+||++|+..|+|||.+|||++++.+.|+++++++.++||+|++|.+++++|++++|.+++++|+.|+++|
T Consensus 92 ~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~a~~V~vtkd~TtIv~G~G~~~~I~~Rv~qI 171 (201)
T 3osx_A 92 IVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQAKRVVINKDTTTIIDGVGEEGAIAARVTQI 171 (201)
T ss_dssp SCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHHH
T ss_pred eEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhCCCccEEEEcCCceEEecCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhccc----HHHHHHHhhhcCCeEE
Q 012945 303 RSTIKLSTS----DKLKDRLAKLSGGYAV 327 (453)
Q Consensus 303 ~~~~~~~~s----~~l~eRl~~l~g~~~t 327 (453)
+++++.++| ++|+||||||+||+|+
T Consensus 172 r~qie~t~S~ydkEKLqERLAKLsGGVAV 200 (201)
T 3osx_A 172 RQQIEESTSDYDREKLQERVAKLAGGVKL 200 (201)
T ss_dssp HHHHHTCCCHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHcCCCcC
Confidence 999999998 8999999999999874
No 29
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=100.00 E-value=1.3e-38 Score=274.69 Aligned_cols=144 Identities=34% Similarity=0.535 Sum_probs=141.8
Q ss_pred eEEEecccCCCcccccccccceeecCeEEEecccccCCHHHHHHHHHHHHHcCCCEEEEecCcchhhhhhHHhhhccCCc
Q 012945 145 GMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKISNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATDFTCTTE 224 (453)
Q Consensus 145 G~~~~~g~~~p~~~~~~~~~~~~l~~p~Ili~d~~i~~~~~i~~~le~i~~~~~~lvii~~~i~~~al~~l~~n~~~~~~ 224 (453)
||.||+||+||||++++++|.+++++|+||++|.||++.++++|+||++.++|+||+|+++|++++||++|+.|+++|.+
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkKIs~i~~llP~LE~v~~~~~pLlIIAedvegeaLatLvvNklrg~l 80 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTL 80 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSEECCHHHHHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHTTSC
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEecccccCHHHHHHHHHHHHHHCCCEEEEecccchhhhhhhhhhhhcccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEccCcccchhhHHHHHHHHhCCEEeeCCCCCCccCCCCCCceeeeEEEEecceEEEEcC
Q 012945 225 KVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVIATMDNVVIIGG 288 (453)
Q Consensus 225 ~i~avk~~~~~~~r~~~Le~la~~tG~~i~~~~~~~~~~~~~~~~LG~~~~v~i~~~~~~~~~g 288 (453)
+++|||+|+||++|++.|+|||.+|||++++++.|+++++++.++||+|++|.+++++|++++|
T Consensus 81 ~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~TtIv~G 144 (145)
T 1srv_A 81 SVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGG 144 (145)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred eEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCccCEEEEcCCCeEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999976
No 30
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=99.87 E-value=6.1e-22 Score=181.01 Aligned_cols=145 Identities=10% Similarity=0.164 Sum_probs=118.9
Q ss_pred ceeEEEeeEEEecccCCCcccccccccceeecCeEEEecccccC-------------CHH-----------HHHHHHHHH
Q 012945 138 NELNFVKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKIS-------------NSN-----------VIRQASLPC 193 (453)
Q Consensus 138 d~~~lv~G~~~~~g~~~p~~~~~~~~~~~~l~~p~Ili~d~~i~-------------~~~-----------~i~~~le~i 193 (453)
++|++++|++|++++.+|.|+ ..++||+|++++++++ +++ .+..++++|
T Consensus 2 ~dS~lv~Gvvl~k~~~~~~mp-------k~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI 74 (178)
T 1gml_A 2 EDSCVLRGVMINKDVTHPRMR-------RYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDI 74 (178)
T ss_dssp -CCSEEEEEEESCCCSSTTSC-------CEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEEEEeccccCCCCC-------cccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHHHH
Confidence 368999999999999888764 3689999999998653 221 245678889
Q ss_pred HHcCCCEEEEecCcchhhhhhHHhhhccCCcceEEEEccCcccchhhHHHHHHHHhCCEEeeCCCCCCccCCCCCCcee-
Q 012945 194 MMQGQSLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGS- 272 (453)
Q Consensus 194 ~~~~~~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~~~~r~~~Le~la~~tG~~i~~~~~~~~~~~~~~~~LG~- 272 (453)
.+.|.++|+++++|++.|+++|..+ +|+++++. ++++|+|||++|||+++++ ++++++++||+
T Consensus 75 ~~~g~nVVl~~k~I~d~a~~~l~k~------gI~~vr~v-----~~~dleria~atGa~iv~~-----~~~l~~~~LG~~ 138 (178)
T 1gml_A 75 IQLKPDVVITEKGISDLAQHYLMRA------NVTAIRRV-----RKTDNNRIARACGARIVSR-----PEELREDDVGTG 138 (178)
T ss_dssp HTTCCSEEEESSCBCHHHHHHHHHT------TCEEECCC-----CHHHHHHHHHHHCCCEESC-----GGGCCGGGSBCC
T ss_pred hhcCCcEEEECCcccHHHHHHHHHC------CCEEEecC-----CHHHHHHHHHHhCCeEeCC-----hhhCChhhhCCc
Confidence 9999999999999999999988864 58899864 5678999999999999996 89999999999
Q ss_pred eeEEE---EecceEEEEcCCCChhhHHHHHHHHHHHhhhcccHHHHHHHhhhcCCeEEEEeccCcHh
Q 012945 273 CKRVI---ATMDNVVIIGGSGELVDIQERCEQLRSTIKLSTSDKLKDRLAKLSGGYAVLKVCGHGKA 336 (453)
Q Consensus 273 ~~~v~---i~~~~~~~~~g~~~~~~i~~r~~~l~~~~~~~~s~~l~eRl~~l~g~~~tI~vrG~t~~ 336 (453)
|+.|+ ++++++++|+||+++. .|||++||+|.+
T Consensus 139 ~~~v~~~~ig~~~~~~~~gc~~~~-------------------------------~~TIllRG~~~~ 174 (178)
T 1gml_A 139 AGLLEIKKIGDEYFTFITDCKDPK-------------------------------ACTILLRGASHH 174 (178)
T ss_dssp EEEEEEEEETTEEEEEEEEESSTT-------------------------------SCEEEEEC----
T ss_pred ccEEEEEEECCeEEEEEECCCCCC-------------------------------EEEEEEECCCcc
Confidence 99987 5788999999997764 489999999875
No 31
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.76 E-value=3.2e-18 Score=153.42 Aligned_cols=127 Identities=17% Similarity=0.264 Sum_probs=107.0
Q ss_pred EeeEEEecccCCCcccccccccceeecCeEEEecccccC-------------CHHH-----------HHHHHHHHHHcCC
Q 012945 143 VKGMKLEWGLKSPYFFTHKNKKECVLDGALVLIYDTKIS-------------NSNV-----------IRQASLPCMMQGQ 198 (453)
Q Consensus 143 v~G~~~~~g~~~p~~~~~~~~~~~~l~~p~Ili~d~~i~-------------~~~~-----------i~~~le~i~~~~~ 198 (453)
++|++|++++.+|.|+ ..++||+|++++++++ ++++ +...+++|.+.|.
T Consensus 1 i~Gvv~~k~~~~~~mp-------k~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~ 73 (159)
T 1ass_A 1 MSGIVIDKEKVHSKMP-------DVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGA 73 (159)
T ss_dssp CCCEEESCCCSCTTSC-------SEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CceEEEecccCCCCCC-------cCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCC
Confidence 4799999999998774 3688999999998654 3322 4567888999999
Q ss_pred CEEEEecCcchhhhhhHHhhhccCCcceEEEEccCcccchhhHHHHHHHHhCCEEeeCCCCCCccCCCCCCceeeeEEE-
Q 012945 199 SLLVVAEDVENEVLGDIATDFTCTTEKVCIIKAAGLAEDRKAIMEDLAILTGGQVLTGGSGMNSTYFVPLKLGSCKRVI- 277 (453)
Q Consensus 199 ~lvii~~~i~~~al~~l~~n~~~~~~~i~avk~~~~~~~r~~~Le~la~~tG~~i~~~~~~~~~~~~~~~~LG~~~~v~- 277 (453)
++|+++++|++.|+++|..+ +|+++++. ++++|+|||++|||+++++ ++++++++||+|+.|+
T Consensus 74 nVVl~~k~I~d~a~~~l~k~------gI~~v~~v-----~~~dleria~atGa~iv~~-----~~~l~~~~LG~~~~v~e 137 (159)
T 1ass_A 74 NVVLCQKGIDDVAQHYLAKE------GIYAVRRV-----KKSDMEKLAKATGAKIVTD-----LDDLTPSVLGEAETVEE 137 (159)
T ss_dssp SEEEESSCBCHHHHHHHHHT------TCEEECSC-----CHHHHHHHHHHHTCCCBSS-----TTSCCTTSCEEEEEEEE
T ss_pred eEEEECCccCHHHHHHHHHC------CCEEEccC-----CHHHHHHHHHHhCCeeeCc-----cccCCcccCccceEEEE
Confidence 99999999999999988864 58899964 5678999999999999996 8999999999999996
Q ss_pred --EecceEEEEcCCCCh
Q 012945 278 --ATMDNVVIIGGSGEL 292 (453)
Q Consensus 278 --i~~~~~~~~~g~~~~ 292 (453)
++++++++|+||++.
T Consensus 138 ~~ig~~~~~~~~g~~~~ 154 (159)
T 1ass_A 138 RKIGDDRMTFVMGCKNH 154 (159)
T ss_dssp EEETTEEEEEEESCC--
T ss_pred EEECCeEEEEEECCCCc
Confidence 578899999999764
No 32
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=36.02 E-value=81 Score=23.96 Aligned_cols=50 Identities=14% Similarity=0.180 Sum_probs=31.1
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCcchhhhhhHHhh-hccCCcceEEEEc
Q 012945 181 SNSNVIRQASLPCMMQGQSLLVVAEDVENEVLGDIATD-FTCTTEKVCIIKA 231 (453)
Q Consensus 181 ~~~~~i~~~le~i~~~~~~lvii~~~i~~~al~~l~~n-~~~~~~~i~avk~ 231 (453)
.+.+++.++++..+..|+||+++-.+-+..-.+.+-.. +..| ...-++|.
T Consensus 35 tssqdirdiiksmkdngkplvvfvngasqndvnefqneakkeg-vsydvlks 85 (112)
T 2lnd_A 35 TSSQDIRDIIKSMKDNGKPLVVFVNGASQNDVNEFQNEAKKEG-VSYDVLKS 85 (112)
T ss_dssp CSHHHHHHHHHHHTTCCSCEEEEECSCCHHHHHHHHHHHHHHT-CEEEEEEC
T ss_pred cchhhHHHHHHHHHhcCCeEEEEecCcccccHHHHHHHHHhcC-cchhhhcc
Confidence 35678889999999999999977665544433333322 2233 33445554
Done!