Query 012946
Match_columns 452
No_of_seqs 131 out of 1129
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 19:18:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012946.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012946hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2qrj_A Saccharopine dehydrogen 100.0 1.6E-76 5.3E-81 608.4 30.6 347 2-435 22-382 (394)
2 3p2y_A Alanine dehydrogenase/p 100.0 9.4E-72 3.2E-76 572.0 26.2 342 3-437 21-379 (381)
3 4dio_A NAD(P) transhydrogenase 100.0 8.9E-72 3.1E-76 576.2 26.0 352 3-441 24-395 (405)
4 1pjc_A Protein (L-alanine dehy 100.0 1.5E-54 5.1E-59 443.0 24.4 337 5-441 1-351 (361)
5 1l7d_A Nicotinamide nucleotide 100.0 3.5E-54 1.2E-58 443.6 27.4 354 5-442 1-378 (384)
6 2eez_A Alanine dehydrogenase; 100.0 4.8E-54 1.6E-58 440.3 23.0 337 5-441 1-350 (369)
7 2vhw_A Alanine dehydrogenase; 100.0 2.2E-53 7.4E-58 437.0 23.3 338 5-441 1-353 (377)
8 1x13_A NAD(P) transhydrogenase 100.0 5.8E-53 2E-57 437.4 21.1 355 4-443 7-378 (401)
9 2rir_A Dipicolinate synthase, 99.8 3.5E-17 1.2E-21 162.3 19.8 266 1-417 4-297 (300)
10 3d4o_A Dipicolinate synthase s 99.6 1.2E-14 4E-19 143.7 21.2 261 1-412 2-290 (293)
11 2a9f_A Putative malic enzyme ( 99.3 9.5E-13 3.2E-17 135.0 4.6 217 24-347 54-292 (398)
12 1vl6_A Malate oxidoreductase; 99.2 8.3E-12 2.8E-16 127.8 5.1 210 24-347 58-297 (388)
13 1v8b_A Adenosylhomocysteinase; 98.1 1.3E-06 4.5E-11 92.0 4.2 165 93-345 170-345 (479)
14 1a4i_A Methylenetetrahydrofola 98.1 4.8E-06 1.7E-10 82.6 7.5 78 201-347 162-240 (301)
15 3d64_A Adenosylhomocysteinase; 98.0 4.9E-05 1.7E-09 80.4 13.0 90 201-345 274-365 (494)
16 3l07_A Bifunctional protein fo 98.0 1.3E-05 4.3E-10 79.1 7.6 78 201-347 158-236 (285)
17 1b0a_A Protein (fold bifunctio 97.9 7.6E-06 2.6E-10 80.7 5.9 78 201-347 156-234 (288)
18 3p2o_A Bifunctional protein fo 97.9 1.7E-05 5.7E-10 78.2 6.9 78 201-347 157-235 (285)
19 4a5o_A Bifunctional protein fo 97.9 1.8E-05 6.3E-10 77.9 7.1 78 201-347 158-236 (286)
20 3gvp_A Adenosylhomocysteinase 97.8 5.8E-05 2E-09 78.4 9.1 89 201-344 217-307 (435)
21 2c2x_A Methylenetetrahydrofola 97.7 5.8E-05 2E-09 74.2 7.7 78 201-347 155-235 (281)
22 3ngx_A Bifunctional protein fo 97.6 6.7E-05 2.3E-09 73.6 6.8 88 180-347 137-225 (276)
23 4a26_A Putative C-1-tetrahydro 97.6 0.0001 3.5E-09 73.1 7.5 78 201-347 162-242 (300)
24 3n58_A Adenosylhomocysteinase; 97.6 0.00013 4.6E-09 76.0 8.4 89 201-344 244-334 (464)
25 3jtm_A Formate dehydrogenase, 97.5 0.00028 9.5E-09 71.5 9.8 174 201-443 161-351 (351)
26 3h9u_A Adenosylhomocysteinase; 97.5 0.00019 6.6E-09 74.6 8.6 89 201-344 208-298 (436)
27 3gg9_A D-3-phosphoglycerate de 97.5 0.00021 7.3E-09 72.4 8.7 171 201-438 157-348 (352)
28 1edz_A 5,10-methylenetetrahydr 97.4 8.2E-05 2.8E-09 74.5 4.5 101 201-347 174-278 (320)
29 3gvx_A Glycerate dehydrogenase 97.2 0.00045 1.5E-08 68.2 7.2 89 201-344 119-209 (290)
30 4hy3_A Phosphoglycerate oxidor 97.2 0.00082 2.8E-08 68.4 8.7 92 201-344 173-266 (365)
31 2yq5_A D-isomer specific 2-hyd 97.1 0.00096 3.3E-08 67.4 8.4 90 201-344 145-236 (343)
32 4e5n_A Thermostable phosphite 97.1 0.00071 2.4E-08 67.9 7.3 92 201-344 142-236 (330)
33 2pi1_A D-lactate dehydrogenase 97.1 0.00096 3.3E-08 67.0 8.2 91 201-344 138-230 (334)
34 4g2n_A D-isomer specific 2-hyd 97.1 0.00092 3.2E-08 67.5 8.1 92 201-344 170-263 (345)
35 3evt_A Phosphoglycerate dehydr 97.1 0.00099 3.4E-08 66.7 8.0 92 201-344 134-227 (324)
36 1wwk_A Phosphoglycerate dehydr 97.1 0.0013 4.3E-08 65.3 8.6 93 201-345 139-233 (307)
37 2g76_A 3-PGDH, D-3-phosphoglyc 97.0 0.0014 4.8E-08 65.9 8.7 93 201-345 162-256 (335)
38 4dgs_A Dehydrogenase; structur 97.0 0.0013 4.6E-08 66.2 8.2 89 201-344 168-258 (340)
39 2ekl_A D-3-phosphoglycerate de 97.0 0.0014 4.9E-08 65.0 8.3 93 201-345 139-233 (313)
40 3oet_A Erythronate-4-phosphate 97.0 0.0015 5E-08 67.0 8.3 89 201-344 116-210 (381)
41 1qp8_A Formate dehydrogenase; 97.0 0.0019 6.7E-08 63.9 9.0 89 201-345 121-211 (303)
42 1xdw_A NAD+-dependent (R)-2-hy 96.9 0.0012 4E-08 66.2 7.1 90 201-344 143-234 (331)
43 3hg7_A D-isomer specific 2-hyd 96.9 0.00072 2.5E-08 67.8 5.4 93 200-344 136-230 (324)
44 3k5p_A D-3-phosphoglycerate de 96.9 0.0012 4.2E-08 68.3 6.9 90 201-344 153-244 (416)
45 1mx3_A CTBP1, C-terminal bindi 96.8 0.0015 5.1E-08 66.0 6.9 94 201-345 165-260 (347)
46 3pp8_A Glyoxylate/hydroxypyruv 96.8 0.001 3.5E-08 66.3 5.3 92 201-344 136-229 (315)
47 3ce6_A Adenosylhomocysteinase; 96.8 0.0018 6.1E-08 68.5 7.3 88 202-345 272-362 (494)
48 2o4c_A Erythronate-4-phosphate 96.8 0.0023 7.9E-08 65.5 7.9 89 201-344 113-207 (380)
49 2dvm_A Malic enzyme, 439AA lon 96.8 0.0044 1.5E-07 64.5 9.8 39 299-344 258-296 (439)
50 1sc6_A PGDH, D-3-phosphoglycer 96.7 0.0026 9E-08 65.5 8.0 95 201-351 142-238 (404)
51 3kb6_A D-lactate dehydrogenase 96.7 0.0031 1.1E-07 63.3 8.2 96 201-351 138-235 (334)
52 1dxy_A D-2-hydroxyisocaproate 96.7 0.0019 6.3E-08 64.8 6.4 92 200-345 141-234 (333)
53 1gdh_A D-glycerate dehydrogena 96.7 0.0033 1.1E-07 62.6 8.0 94 201-345 143-239 (320)
54 1gpj_A Glutamyl-tRNA reductase 96.7 0.0026 8.8E-08 65.2 7.3 123 202-396 165-294 (404)
55 2cuk_A Glycerate dehydrogenase 96.7 0.0036 1.2E-07 62.1 8.1 88 201-345 141-230 (311)
56 2j6i_A Formate dehydrogenase; 96.7 0.0028 9.5E-08 64.4 7.4 94 201-345 161-258 (364)
57 2dbq_A Glyoxylate reductase; D 96.7 0.0045 1.5E-07 61.9 8.8 98 201-352 147-246 (334)
58 2nac_A NAD-dependent formate d 96.7 0.0031 1.1E-07 64.7 7.8 94 201-345 188-284 (393)
59 3ba1_A HPPR, hydroxyphenylpyru 96.6 0.0028 9.5E-08 63.6 7.1 90 201-345 161-252 (333)
60 1j4a_A D-LDH, D-lactate dehydr 96.6 0.003 1E-07 63.2 6.9 92 201-345 143-236 (333)
61 2gcg_A Glyoxylate reductase/hy 96.4 0.0091 3.1E-07 59.5 8.8 92 201-345 152-247 (330)
62 2w2k_A D-mandelate dehydrogena 96.3 0.0077 2.6E-07 60.6 8.0 93 201-345 160-257 (348)
63 3nv9_A Malic enzyme; rossmann 96.3 0.0038 1.3E-07 65.1 5.5 108 201-347 216-330 (487)
64 2hk9_A Shikimate dehydrogenase 96.2 0.011 3.8E-07 57.1 8.4 30 201-230 126-155 (275)
65 1ygy_A PGDH, D-3-phosphoglycer 96.2 0.0095 3.3E-07 63.3 8.3 98 201-352 139-238 (529)
66 3ond_A Adenosylhomocysteinase; 96.1 0.0071 2.4E-07 63.7 6.9 88 201-345 262-353 (488)
67 3don_A Shikimate dehydrogenase 96.1 0.0062 2.1E-07 59.6 5.9 30 201-230 114-144 (277)
68 3phh_A Shikimate dehydrogenase 95.9 0.024 8.2E-07 55.2 9.2 89 204-347 118-212 (269)
69 3oj0_A Glutr, glutamyl-tRNA re 95.9 0.0035 1.2E-07 54.3 2.7 27 204-230 21-47 (144)
70 3ic5_A Putative saccharopine d 95.9 0.021 7E-07 46.5 7.3 27 204-230 5-32 (118)
71 3u62_A Shikimate dehydrogenase 95.8 0.021 7.2E-07 54.9 8.2 27 203-230 108-135 (253)
72 3jyo_A Quinate/shikimate dehyd 95.8 0.0043 1.5E-07 60.8 3.3 30 201-230 124-154 (283)
73 2egg_A AROE, shikimate 5-dehyd 95.7 0.013 4.6E-07 57.5 6.6 30 201-230 138-168 (297)
74 3tnl_A Shikimate dehydrogenase 95.7 0.0077 2.6E-07 60.0 4.5 30 201-230 151-181 (315)
75 3fbt_A Chorismate mutase and s 95.6 0.027 9.2E-07 55.2 8.0 30 201-230 119-149 (282)
76 1c1d_A L-phenylalanine dehydro 95.6 0.04 1.4E-06 55.8 9.4 30 201-230 172-201 (355)
77 3o8q_A Shikimate 5-dehydrogena 95.6 0.01 3.5E-07 58.1 4.8 30 201-230 123-153 (281)
78 3tum_A Shikimate dehydrogenase 95.5 0.033 1.1E-06 54.1 8.1 99 201-346 122-227 (269)
79 2d0i_A Dehydrogenase; structur 95.4 0.041 1.4E-06 55.0 8.7 96 201-351 143-240 (333)
80 3t4e_A Quinate/shikimate dehyd 95.3 0.011 3.7E-07 58.8 4.2 30 201-230 145-175 (312)
81 2d5c_A AROE, shikimate 5-dehyd 95.1 0.034 1.2E-06 53.1 7.0 29 201-230 114-142 (263)
82 3pwz_A Shikimate dehydrogenase 95.1 0.032 1.1E-06 54.2 6.8 30 201-230 117-147 (272)
83 1nyt_A Shikimate 5-dehydrogena 94.9 0.059 2E-06 51.9 7.9 30 201-230 116-145 (271)
84 1leh_A Leucine dehydrogenase; 94.7 0.1 3.5E-06 52.9 9.4 30 201-230 170-199 (364)
85 1p77_A Shikimate 5-dehydrogena 94.6 0.05 1.7E-06 52.5 6.6 30 201-230 116-145 (272)
86 1pj3_A NAD-dependent malic enz 94.5 0.12 4.1E-06 55.0 9.6 190 74-345 180-401 (564)
87 1gq2_A Malic enzyme; oxidoredu 94.5 0.044 1.5E-06 58.2 6.2 104 201-345 279-396 (555)
88 1o0s_A NAD-ME, NAD-dependent m 94.4 0.1 3.5E-06 55.8 8.7 104 201-345 317-434 (605)
89 1nvt_A Shikimate 5'-dehydrogen 94.3 0.068 2.3E-06 51.8 6.8 29 201-230 125-153 (287)
90 4b4u_A Bifunctional protein fo 94.3 0.1 3.4E-06 51.7 8.0 78 201-347 176-254 (303)
91 3aog_A Glutamate dehydrogenase 93.7 0.12 4.1E-06 53.7 7.5 46 176-230 216-261 (440)
92 1v9l_A Glutamate dehydrogenase 93.6 0.087 3E-06 54.5 6.3 46 176-230 191-236 (421)
93 3l6d_A Putative oxidoreductase 93.6 0.022 7.5E-07 55.8 1.7 28 203-230 8-35 (306)
94 3abi_A Putative uncharacterize 93.2 0.1 3.6E-06 52.2 6.1 24 203-226 15-38 (365)
95 1yqd_A Sinapyl alcohol dehydro 93.2 0.18 6.3E-06 50.3 7.9 92 204-345 188-283 (366)
96 2tmg_A Protein (glutamate dehy 93.2 0.22 7.7E-06 51.3 8.6 30 201-230 206-236 (415)
97 4gbj_A 6-phosphogluconate dehy 93.1 0.074 2.5E-06 52.1 4.7 89 205-345 6-98 (297)
98 3pef_A 6-phosphogluconate dehy 93.0 0.037 1.3E-06 53.4 2.3 26 205-230 2-27 (287)
99 2bma_A Glutamate dehydrogenase 93.0 0.15 5E-06 53.4 6.9 31 201-231 249-279 (470)
100 3qha_A Putative oxidoreductase 92.9 0.061 2.1E-06 52.3 3.7 27 204-230 15-41 (296)
101 1bgv_A Glutamate dehydrogenase 92.6 0.095 3.2E-06 54.6 4.8 47 176-231 211-257 (449)
102 4dll_A 2-hydroxy-3-oxopropiona 92.5 0.046 1.6E-06 53.8 2.2 28 203-230 30-57 (320)
103 3doj_A AT3G25530, dehydrogenas 92.5 0.051 1.8E-06 53.2 2.5 28 203-230 20-47 (310)
104 3g0o_A 3-hydroxyisobutyrate de 92.3 0.05 1.7E-06 52.9 2.2 27 204-230 7-33 (303)
105 3k92_A NAD-GDH, NAD-specific g 92.3 0.13 4.4E-06 53.2 5.3 30 201-230 218-247 (424)
106 1npy_A Hypothetical shikimate 92.2 0.34 1.2E-05 46.9 7.9 25 204-228 119-143 (271)
107 1uuf_A YAHK, zinc-type alcohol 91.8 0.2 6.8E-06 50.2 5.9 27 204-230 195-221 (369)
108 2i99_A MU-crystallin homolog; 91.1 0.56 1.9E-05 46.0 8.3 28 203-230 134-163 (312)
109 3ggo_A Prephenate dehydrogenas 90.7 0.23 8E-06 48.9 5.1 27 204-230 33-61 (314)
110 3ew7_A LMO0794 protein; Q8Y8U8 90.5 0.47 1.6E-05 42.5 6.6 26 205-230 1-27 (221)
111 3hdj_A Probable ornithine cycl 90.4 0.35 1.2E-05 47.8 6.1 45 299-353 178-222 (313)
112 1e3i_A Alcohol dehydrogenase, 90.1 0.59 2E-05 46.6 7.6 27 204-230 196-223 (376)
113 2h78_A Hibadh, 3-hydroxyisobut 90.1 0.059 2E-06 52.2 0.1 26 205-230 4-29 (302)
114 2vns_A Metalloreductase steap3 90.0 0.33 1.1E-05 44.8 5.2 28 203-230 27-54 (215)
115 2cf5_A Atccad5, CAD, cinnamyl 89.9 0.51 1.7E-05 46.8 6.9 27 204-230 181-207 (357)
116 4e21_A 6-phosphogluconate dehy 89.8 0.17 5.9E-06 50.9 3.3 27 204-230 22-48 (358)
117 1cdo_A Alcohol dehydrogenase; 89.7 0.73 2.5E-05 45.8 7.8 27 204-230 193-220 (374)
118 3kkj_A Amine oxidase, flavin-c 89.5 0.21 7.1E-06 44.1 3.3 25 206-230 4-28 (336)
119 3qvo_A NMRA family protein; st 89.4 0.5 1.7E-05 43.5 6.0 28 203-230 22-51 (236)
120 3pdu_A 3-hydroxyisobutyrate de 89.3 0.057 1.9E-06 52.0 -0.7 26 205-230 2-27 (287)
121 3nx4_A Putative oxidoreductase 89.2 0.61 2.1E-05 45.2 6.8 25 206-230 149-174 (324)
122 1lu9_A Methylene tetrahydromet 89.2 0.84 2.9E-05 43.8 7.6 29 202-230 117-146 (287)
123 4ezb_A Uncharacterized conserv 88.9 0.31 1.1E-05 47.9 4.4 27 204-230 24-51 (317)
124 3qsg_A NAD-binding phosphogluc 88.7 0.25 8.7E-06 48.3 3.5 27 204-230 24-51 (312)
125 2cvz_A Dehydrogenase, 3-hydrox 88.2 0.13 4.3E-06 49.1 0.9 24 206-230 3-26 (289)
126 1vpd_A Tartronate semialdehyde 88.1 0.1 3.6E-06 50.1 0.3 26 205-230 6-31 (299)
127 4e12_A Diketoreductase; oxidor 88.1 0.38 1.3E-05 46.2 4.3 26 205-230 5-30 (283)
128 3cky_A 2-hydroxymethyl glutara 87.9 0.11 3.8E-06 49.9 0.4 27 204-230 4-30 (301)
129 4eye_A Probable oxidoreductase 87.9 0.32 1.1E-05 48.0 3.7 27 204-230 160-187 (342)
130 2ahr_A Putative pyrroline carb 87.9 0.6 2E-05 43.8 5.5 27 204-230 3-29 (259)
131 3d1l_A Putative NADP oxidoredu 87.8 0.17 5.8E-06 47.9 1.6 28 202-229 8-35 (266)
132 2g1u_A Hypothetical protein TM 87.8 0.44 1.5E-05 41.3 4.1 31 200-230 15-45 (155)
133 1piw_A Hypothetical zinc-type 87.7 0.66 2.3E-05 45.9 5.9 27 204-230 180-206 (360)
134 2yjz_A Metalloreductase steap4 87.5 0.1 3.6E-06 48.0 0.0 29 202-230 17-45 (201)
135 3dtt_A NADP oxidoreductase; st 87.3 0.28 9.6E-06 46.2 2.8 30 201-230 16-45 (245)
136 2e1m_A L-glutamate oxidase; L- 87.2 0.61 2.1E-05 47.3 5.4 35 196-230 36-70 (376)
137 2z2v_A Hypothetical protein PH 86.8 0.69 2.4E-05 46.5 5.5 27 203-230 15-41 (365)
138 3e8x_A Putative NAD-dependent 86.8 1.3 4.6E-05 40.4 7.1 30 201-230 18-48 (236)
139 4huj_A Uncharacterized protein 86.6 0.71 2.4E-05 42.6 5.1 27 204-230 23-49 (220)
140 3r6d_A NAD-dependent epimerase 86.4 1.2 4E-05 40.4 6.4 25 206-230 7-33 (221)
141 3aoe_E Glutamate dehydrogenase 86.4 0.69 2.4E-05 47.7 5.3 47 176-231 199-245 (419)
142 2o23_A HADH2 protein; HSD17B10 86.2 2.2 7.6E-05 39.4 8.4 39 202-240 10-53 (265)
143 3tpc_A Short chain alcohol deh 86.0 2 6.7E-05 40.1 7.9 29 202-230 5-34 (257)
144 2uyy_A N-PAC protein; long-cha 85.9 0.19 6.5E-06 48.8 0.8 27 204-230 30-56 (316)
145 3uko_A Alcohol dehydrogenase c 85.8 0.89 3E-05 45.3 5.7 27 204-230 194-221 (378)
146 3obb_A Probable 3-hydroxyisobu 85.8 0.16 5.4E-06 49.9 0.1 26 205-230 4-29 (300)
147 3gvi_A Malate dehydrogenase; N 85.7 0.69 2.4E-05 46.0 4.8 32 199-230 2-34 (324)
148 1p0f_A NADP-dependent alcohol 85.7 0.94 3.2E-05 45.0 5.8 27 204-230 192-219 (373)
149 3g79_A NDP-N-acetyl-D-galactos 85.5 2.5 8.6E-05 44.2 9.1 28 203-230 17-46 (478)
150 2hcy_A Alcohol dehydrogenase 1 85.2 0.81 2.8E-05 45.0 5.0 27 204-230 170-197 (347)
151 3h2s_A Putative NADH-flavin re 85.0 1.1 3.8E-05 40.2 5.5 26 205-230 1-27 (224)
152 3fpf_A Mtnas, putative unchara 85.0 2.4 8.1E-05 41.7 8.2 80 140-230 68-149 (298)
153 2pv7_A T-protein [includes: ch 84.4 1 3.5E-05 43.6 5.2 26 205-230 22-48 (298)
154 3pi7_A NADH oxidoreductase; gr 84.3 0.63 2.2E-05 45.8 3.7 26 205-230 166-192 (349)
155 3qwb_A Probable quinone oxidor 83.9 0.72 2.5E-05 45.0 3.9 27 204-230 149-176 (334)
156 2zcu_A Uncharacterized oxidore 83.8 2 6.9E-05 40.0 6.9 25 206-230 1-28 (286)
157 2yfq_A Padgh, NAD-GDH, NAD-spe 83.7 0.69 2.4E-05 47.7 3.8 31 201-231 209-239 (421)
158 4b7c_A Probable oxidoreductase 83.7 0.56 1.9E-05 45.8 3.0 27 204-230 150-177 (336)
159 4fn4_A Short chain dehydrogena 83.6 1.1 3.9E-05 42.7 5.1 29 202-230 5-34 (254)
160 4dup_A Quinone oxidoreductase; 83.6 0.79 2.7E-05 45.3 4.1 27 204-230 168-195 (353)
161 4hb9_A Similarities with proba 83.5 0.78 2.7E-05 45.0 4.0 26 205-230 2-27 (412)
162 4a7p_A UDP-glucose dehydrogena 83.3 3.3 0.00011 42.8 8.9 37 204-240 8-48 (446)
163 1z82_A Glycerol-3-phosphate de 83.0 2.2 7.4E-05 41.8 7.0 28 203-230 13-40 (335)
164 1x7d_A Ornithine cyclodeaminas 82.8 1.9 6.6E-05 43.1 6.6 47 299-353 189-235 (350)
165 2iid_A L-amino-acid oxidase; f 82.7 0.95 3.2E-05 46.4 4.4 35 196-230 25-59 (498)
166 3gqv_A Enoyl reductase; medium 82.6 2.1 7.1E-05 42.6 6.8 35 203-237 164-202 (371)
167 3ged_A Short-chain dehydrogena 82.4 1 3.5E-05 42.9 4.2 26 205-230 3-29 (247)
168 3dhn_A NAD-dependent epimerase 82.4 2.7 9.3E-05 37.8 7.0 26 205-230 5-31 (227)
169 3ius_A Uncharacterized conserv 81.8 2.3 7.9E-05 39.8 6.4 26 205-230 6-31 (286)
170 3c24_A Putative oxidoreductase 81.6 0.58 2E-05 44.8 2.2 26 205-230 12-38 (286)
171 3mw9_A GDH 1, glutamate dehydr 81.6 1.4 4.8E-05 46.4 5.2 35 196-230 236-270 (501)
172 2gf2_A Hibadh, 3-hydroxyisobut 81.6 0.22 7.7E-06 47.6 -0.8 25 206-230 2-26 (296)
173 3pgx_A Carveol dehydrogenase; 81.4 3.1 0.00011 39.3 7.3 30 201-230 12-42 (280)
174 3gg2_A Sugar dehydrogenase, UD 81.2 0.99 3.4E-05 46.7 3.9 26 205-230 3-28 (450)
175 1pg5_A Aspartate carbamoyltran 81.1 10 0.00036 37.1 11.0 101 201-353 146-266 (299)
176 3dqp_A Oxidoreductase YLBE; al 81.0 1.9 6.4E-05 38.9 5.3 26 205-230 1-27 (219)
177 1omo_A Alanine dehydrogenase; 80.9 4.4 0.00015 39.8 8.4 44 299-353 183-226 (322)
178 2ph5_A Homospermidine synthase 80.9 1.4 4.9E-05 46.1 5.0 23 204-226 13-35 (480)
179 1t2d_A LDH-P, L-lactate dehydr 80.8 2.5 8.5E-05 41.7 6.5 27 204-230 4-31 (322)
180 1yb4_A Tartronic semialdehyde 80.7 0.3 1E-05 46.6 -0.2 27 204-230 3-29 (295)
181 3ktd_A Prephenate dehydrogenas 80.7 0.52 1.8E-05 47.1 1.5 27 204-230 8-34 (341)
182 4fcc_A Glutamate dehydrogenase 80.6 1.6 5.4E-05 45.4 5.2 30 201-230 232-261 (450)
183 2i6u_A Otcase, ornithine carba 80.6 11 0.00039 37.0 11.1 65 164-236 116-184 (307)
184 1mv8_A GMD, GDP-mannose 6-dehy 80.5 1.3 4.3E-05 45.5 4.4 26 205-230 1-26 (436)
185 2j8z_A Quinone oxidoreductase; 80.4 0.81 2.8E-05 45.2 2.8 27 204-230 163-190 (354)
186 4hp8_A 2-deoxy-D-gluconate 3-d 80.4 7.1 0.00024 37.1 9.3 30 201-230 6-36 (247)
187 3e48_A Putative nucleoside-dip 80.3 2.1 7.1E-05 40.3 5.6 26 205-230 1-28 (289)
188 1y6j_A L-lactate dehydrogenase 80.3 1.5 5.3E-05 43.1 4.8 26 203-228 6-31 (318)
189 3two_A Mannitol dehydrogenase; 80.3 1.6 5.6E-05 42.8 5.0 27 204-230 177-203 (348)
190 3l4b_C TRKA K+ channel protien 80.0 1.4 5E-05 40.1 4.2 26 205-230 1-26 (218)
191 4b79_A PA4098, probable short- 80.0 3.7 0.00013 39.0 7.2 27 204-230 11-38 (242)
192 3dfz_A SIRC, precorrin-2 dehyd 80.0 1.7 5.9E-05 40.8 4.8 39 201-239 28-68 (223)
193 3h7a_A Short chain dehydrogena 80.0 2.5 8.4E-05 39.5 5.9 28 203-230 6-34 (252)
194 2g5c_A Prephenate dehydrogenas 79.8 1.2 4.1E-05 42.2 3.7 26 205-230 2-29 (281)
195 4gwg_A 6-phosphogluconate dehy 79.7 0.84 2.9E-05 47.9 2.7 27 204-230 4-30 (484)
196 1hdo_A Biliverdin IX beta redu 79.6 2.3 7.8E-05 37.4 5.3 26 205-230 4-30 (206)
197 1bg6_A N-(1-D-carboxylethyl)-L 79.6 1.3 4.6E-05 43.1 4.1 27 204-230 4-30 (359)
198 1np3_A Ketol-acid reductoisome 79.6 0.53 1.8E-05 46.7 1.2 27 204-230 16-42 (338)
199 1gtm_A Glutamate dehydrogenase 79.4 1.8 6.2E-05 44.5 5.1 29 202-230 210-239 (419)
200 2f1k_A Prephenate dehydrogenas 79.4 1.4 4.7E-05 41.7 4.0 26 205-230 1-26 (279)
201 3gaf_A 7-alpha-hydroxysteroid 79.4 2.7 9.1E-05 39.3 5.9 30 201-230 9-39 (256)
202 1hdc_A 3-alpha, 20 beta-hydrox 79.2 4 0.00014 37.9 7.1 28 203-230 4-32 (254)
203 4fgs_A Probable dehydrogenase 78.9 0.97 3.3E-05 43.8 2.8 30 201-230 26-56 (273)
204 3pid_A UDP-glucose 6-dehydroge 78.8 2.1 7E-05 44.3 5.3 28 202-230 34-61 (432)
205 4ina_A Saccharopine dehydrogen 78.6 1.1 3.7E-05 45.6 3.1 24 205-228 2-25 (405)
206 2jah_A Clavulanic acid dehydro 78.6 4.4 0.00015 37.5 7.2 29 202-230 5-34 (247)
207 3rp8_A Flavoprotein monooxygen 78.4 1.5 5.2E-05 43.5 4.1 29 202-230 21-49 (407)
208 4e6p_A Probable sorbitol dehyd 78.3 2.9 0.0001 39.0 5.9 29 202-230 6-35 (259)
209 4dgk_A Phytoene dehydrogenase; 78.3 1.1 3.7E-05 45.9 3.0 26 205-230 2-27 (501)
210 1ff9_A Saccharopine reductase; 78.1 2.3 7.9E-05 43.9 5.5 26 205-230 4-29 (450)
211 3o38_A Short chain dehydrogena 78.0 2.1 7.2E-05 40.0 4.7 30 201-230 19-50 (266)
212 3goh_A Alcohol dehydrogenase, 77.9 2 6.8E-05 41.4 4.7 28 203-230 142-169 (315)
213 2pgd_A 6-phosphogluconate dehy 77.7 1.2 4.2E-05 46.3 3.3 26 205-230 3-28 (482)
214 3ak4_A NADH-dependent quinucli 77.7 4.4 0.00015 37.7 6.9 29 202-230 10-39 (263)
215 3gpi_A NAD-dependent epimerase 77.6 2.7 9.4E-05 39.4 5.5 26 205-230 4-29 (286)
216 1dxh_A Ornithine carbamoyltran 77.5 5 0.00017 40.1 7.5 36 201-236 152-191 (335)
217 4dqx_A Probable oxidoreductase 77.4 3.3 0.00011 39.3 6.0 30 201-230 24-54 (277)
218 1vlv_A Otcase, ornithine carba 77.4 12 0.00041 37.1 10.2 36 201-236 164-203 (325)
219 3lzw_A Ferredoxin--NADP reduct 77.4 1.8 6.3E-05 40.9 4.2 30 204-233 7-38 (332)
220 3oz2_A Digeranylgeranylglycero 77.2 1.4 4.7E-05 42.7 3.3 25 206-230 6-30 (397)
221 3gt0_A Pyrroline-5-carboxylate 77.0 0.85 2.9E-05 42.7 1.7 24 205-228 3-26 (247)
222 4a5l_A Thioredoxin reductase; 76.9 1.3 4.3E-05 42.0 2.9 26 205-230 5-30 (314)
223 2p4q_A 6-phosphogluconate dehy 76.9 0.98 3.3E-05 47.4 2.3 27 204-230 10-36 (497)
224 1nff_A Putative oxidoreductase 76.9 4.5 0.00015 37.8 6.7 29 202-230 5-34 (260)
225 3is3_A 17BETA-hydroxysteroid d 76.8 4.6 0.00016 37.9 6.8 31 200-230 14-45 (270)
226 3tzq_B Short-chain type dehydr 76.8 4 0.00014 38.4 6.4 40 201-240 8-52 (271)
227 2x4g_A Nucleoside-diphosphate- 76.7 5.7 0.00019 37.9 7.5 26 205-230 14-40 (342)
228 2zyd_A 6-phosphogluconate dehy 76.6 1.4 4.7E-05 46.0 3.3 28 203-230 14-41 (480)
229 3eag_A UDP-N-acetylmuramate:L- 76.4 5.2 0.00018 39.1 7.3 27 204-230 4-31 (326)
230 3r3j_A Glutamate dehydrogenase 76.4 1.3 4.5E-05 46.1 3.0 30 201-230 236-265 (456)
231 2bka_A CC3, TAT-interacting pr 76.3 5 0.00017 36.4 6.7 27 204-230 18-47 (242)
232 3itj_A Thioredoxin reductase 1 76.3 1.4 4.7E-05 41.9 3.0 28 203-230 21-48 (338)
233 3pwk_A Aspartate-semialdehyde 76.2 3.2 0.00011 41.9 5.7 36 302-347 62-98 (366)
234 3fbs_A Oxidoreductase; structu 76.2 1.7 5.8E-05 40.5 3.5 26 205-230 3-28 (297)
235 3rwb_A TPLDH, pyridoxal 4-dehy 76.2 3.7 0.00013 38.1 5.9 30 201-230 3-33 (247)
236 2jae_A L-amino acid oxidase; o 76.2 2 6.7E-05 43.9 4.3 28 203-230 10-37 (489)
237 3f9i_A 3-oxoacyl-[acyl-carrier 76.1 1.7 5.9E-05 40.0 3.5 30 201-230 11-41 (249)
238 3tri_A Pyrroline-5-carboxylate 76.1 3.8 0.00013 39.2 6.1 24 205-228 4-27 (280)
239 3zv4_A CIS-2,3-dihydrobiphenyl 76.1 2.3 8E-05 40.4 4.5 28 203-230 4-32 (281)
240 3guy_A Short-chain dehydrogena 76.0 3 0.0001 38.1 5.1 25 206-230 3-28 (230)
241 2izz_A Pyrroline-5-carboxylate 76.0 1.5 5.1E-05 42.9 3.2 24 204-227 22-45 (322)
242 1hxh_A 3BETA/17BETA-hydroxyste 76.0 1.6 5.5E-05 40.6 3.3 29 202-230 4-33 (253)
243 4gcm_A TRXR, thioredoxin reduc 75.9 1.6 5.5E-05 41.5 3.3 26 205-230 7-32 (312)
244 4g81_D Putative hexonate dehyd 75.9 2.1 7.2E-05 40.9 4.1 30 201-230 6-36 (255)
245 3r9u_A Thioredoxin reductase; 75.8 1.3 4.3E-05 41.8 2.5 27 204-230 4-30 (315)
246 3nrn_A Uncharacterized protein 75.7 1.9 6.6E-05 43.0 4.0 26 205-230 1-26 (421)
247 3r1i_A Short-chain type dehydr 75.6 3.4 0.00012 39.2 5.5 30 201-230 29-59 (276)
248 4a9w_A Monooxygenase; baeyer-v 75.4 2.2 7.6E-05 40.7 4.2 30 205-234 4-35 (357)
249 4ibo_A Gluconate dehydrogenase 75.4 1.3 4.4E-05 42.1 2.5 30 201-230 23-53 (271)
250 3ka7_A Oxidoreductase; structu 75.3 2 6.9E-05 42.6 4.0 25 206-230 2-26 (425)
251 2ef0_A Ornithine carbamoyltran 75.2 5.7 0.00019 39.0 7.1 36 201-236 151-189 (301)
252 3uog_A Alcohol dehydrogenase; 75.2 2.2 7.4E-05 42.3 4.2 27 204-230 190-216 (363)
253 1pgj_A 6PGDH, 6-PGDH, 6-phosph 75.1 0.95 3.2E-05 47.2 1.6 26 205-230 2-27 (478)
254 3k7m_X 6-hydroxy-L-nicotine ox 75.1 1.8 6.1E-05 43.2 3.6 26 205-230 2-27 (431)
255 2x0j_A Malate dehydrogenase; o 75.0 4.5 0.00015 39.5 6.3 24 205-228 1-24 (294)
256 1iy8_A Levodione reductase; ox 75.0 3.8 0.00013 38.3 5.7 29 202-230 11-40 (267)
257 3ics_A Coenzyme A-disulfide re 74.9 2.1 7.2E-05 45.1 4.2 28 203-230 35-64 (588)
258 2xdo_A TETX2 protein; tetracyc 74.9 2.3 8E-05 42.1 4.4 28 203-230 25-52 (398)
259 3n74_A 3-ketoacyl-(acyl-carrie 74.8 5.1 0.00017 37.1 6.4 29 202-230 7-36 (261)
260 2b5w_A Glucose dehydrogenase; 74.8 3.5 0.00012 40.6 5.5 28 203-230 172-202 (357)
261 2nwq_A Probable short-chain de 74.6 1.2 4.2E-05 42.3 2.1 29 201-230 19-48 (272)
262 1ml4_A Aspartate transcarbamoy 74.6 4.7 0.00016 39.7 6.4 104 201-353 152-274 (308)
263 2b9w_A Putative aminooxidase; 74.5 1.9 6.4E-05 43.0 3.5 28 203-230 5-33 (424)
264 3d1c_A Flavin-containing putat 74.5 2.4 8.1E-05 41.1 4.2 31 204-234 4-37 (369)
265 2vou_A 2,6-dihydroxypyridine h 74.4 2.4 8.1E-05 42.1 4.2 28 203-230 4-31 (397)
266 2yv3_A Aspartate-semialdehyde 74.3 3 0.0001 41.4 4.9 34 304-347 61-95 (331)
267 2a4k_A 3-oxoacyl-[acyl carrier 74.2 4.8 0.00016 37.8 6.2 28 203-230 5-33 (263)
268 3imf_A Short chain dehydrogena 74.2 3.3 0.00011 38.6 5.0 29 202-230 4-33 (257)
269 3f8d_A Thioredoxin reductase ( 74.1 2 7E-05 40.3 3.5 27 204-230 15-41 (323)
270 1e3j_A NADP(H)-dependent ketos 74.1 2.4 8.2E-05 41.6 4.1 27 204-230 169-195 (352)
271 2y0c_A BCEC, UDP-glucose dehyd 73.9 4 0.00014 42.4 6.0 28 203-230 7-34 (478)
272 3s2e_A Zinc-containing alcohol 73.9 2 6.8E-05 41.9 3.5 27 204-230 167-193 (340)
273 4ej6_A Putative zinc-binding d 73.8 2.4 8.3E-05 42.1 4.1 27 204-230 183-210 (370)
274 3nrc_A Enoyl-[acyl-carrier-pro 73.8 3.2 0.00011 39.2 4.9 30 201-230 23-55 (280)
275 1duv_G Octase-1, ornithine tra 73.7 4.7 0.00016 40.2 6.2 36 201-236 152-191 (333)
276 4aj2_A L-lactate dehydrogenase 73.7 2.7 9.2E-05 41.8 4.4 28 201-228 16-43 (331)
277 2pzm_A Putative nucleotide sug 73.7 7.3 0.00025 37.3 7.5 32 199-230 15-47 (330)
278 3sxp_A ADP-L-glycero-D-mannohe 73.7 8.9 0.00031 37.2 8.2 30 201-230 7-39 (362)
279 3ip1_A Alcohol dehydrogenase, 73.7 2.4 8.3E-05 42.6 4.1 27 204-230 214-241 (404)
280 1smk_A Malate dehydrogenase, g 73.6 3.7 0.00013 40.4 5.4 25 203-227 7-32 (326)
281 3vrd_B FCCB subunit, flavocyto 73.6 2.4 8E-05 42.0 4.0 31 205-235 3-37 (401)
282 3klj_A NAD(FAD)-dependent dehy 73.5 2.4 8E-05 42.6 4.0 32 203-234 8-41 (385)
283 3cxt_A Dehydrogenase with diff 73.4 3.4 0.00012 39.6 5.0 29 202-230 32-61 (291)
284 1kol_A Formaldehyde dehydrogen 73.3 2.5 8.6E-05 42.2 4.1 27 204-230 186-213 (398)
285 1pl8_A Human sorbitol dehydrog 73.3 2.6 8.8E-05 41.5 4.1 27 204-230 172-199 (356)
286 3k96_A Glycerol-3-phosphate de 73.2 5.2 0.00018 39.9 6.4 28 203-230 28-55 (356)
287 2q2v_A Beta-D-hydroxybutyrate 73.2 5.4 0.00018 36.9 6.2 27 204-230 4-31 (255)
288 1rsg_A FMS1 protein; FAD bindi 73.0 2 6.9E-05 44.4 3.4 27 204-230 8-35 (516)
289 4fk1_A Putative thioredoxin re 72.9 2.1 7.2E-05 40.7 3.3 26 205-230 7-32 (304)
290 3fg2_P Putative rubredoxin red 72.9 2.6 8.8E-05 42.1 4.1 24 205-228 2-25 (404)
291 3t7c_A Carveol dehydrogenase; 72.9 8 0.00027 36.9 7.5 30 201-230 25-55 (299)
292 1kyq_A Met8P, siroheme biosynt 72.9 2 7E-05 41.6 3.2 34 201-234 10-45 (274)
293 4gkb_A 3-oxoacyl-[acyl-carrier 72.8 4.3 0.00015 38.7 5.5 30 201-230 4-34 (258)
294 3m6i_A L-arabinitol 4-dehydrog 72.7 2.1 7.3E-05 42.1 3.4 26 204-229 180-205 (363)
295 3alj_A 2-methyl-3-hydroxypyrid 72.7 2.7 9.2E-05 41.3 4.1 28 203-230 10-37 (379)
296 3pxx_A Carveol dehydrogenase; 72.7 6.3 0.00022 36.9 6.6 30 201-230 7-37 (287)
297 1fmc_A 7 alpha-hydroxysteroid 72.6 3.1 0.00011 38.1 4.3 29 202-230 9-38 (255)
298 3p7m_A Malate dehydrogenase; p 72.6 4.5 0.00015 39.9 5.7 27 204-230 5-32 (321)
299 3grp_A 3-oxoacyl-(acyl carrier 72.6 3.2 0.00011 39.1 4.5 30 201-230 24-54 (266)
300 3tsc_A Putative oxidoreductase 72.5 3.5 0.00012 38.8 4.8 30 201-230 8-38 (277)
301 3dr3_A N-acetyl-gamma-glutamyl 72.5 8.3 0.00028 38.3 7.7 39 300-348 71-110 (337)
302 1ryi_A Glycine oxidase; flavop 72.3 2.9 9.9E-05 40.7 4.3 28 203-230 16-43 (382)
303 3ai3_A NADPH-sorbose reductase 72.2 6.4 0.00022 36.5 6.5 28 203-230 6-34 (263)
304 2gv8_A Monooxygenase; FMO, FAD 72.1 2.9 0.0001 42.3 4.4 28 203-230 5-34 (447)
305 2ywl_A Thioredoxin reductase r 72.1 2.7 9.1E-05 36.6 3.5 26 205-230 2-27 (180)
306 2nm0_A Probable 3-oxacyl-(acyl 72.1 4.4 0.00015 37.9 5.3 29 202-230 19-48 (253)
307 3uve_A Carveol dehydrogenase ( 72.0 5.5 0.00019 37.6 6.0 30 201-230 8-38 (286)
308 2axq_A Saccharopine dehydrogen 71.9 1.7 5.8E-05 45.3 2.5 30 201-230 20-50 (467)
309 3m1a_A Putative dehydrogenase; 71.9 5.7 0.00019 37.3 6.1 27 204-230 5-32 (281)
310 1lss_A TRK system potassium up 71.9 3.4 0.00012 34.0 4.0 26 205-230 5-30 (140)
311 3uf0_A Short-chain dehydrogena 71.8 9 0.00031 36.1 7.5 30 201-230 28-58 (273)
312 3hyw_A Sulfide-quinone reducta 71.7 2.7 9.3E-05 42.5 4.0 31 205-235 3-37 (430)
313 1yj8_A Glycerol-3-phosphate de 71.7 8.5 0.00029 38.1 7.6 24 204-227 21-44 (375)
314 3ko8_A NAD-dependent epimerase 71.7 8.4 0.00029 36.2 7.3 26 205-230 1-27 (312)
315 1vl8_A Gluconate 5-dehydrogena 71.6 7 0.00024 36.7 6.6 30 201-230 18-48 (267)
316 1s3e_A Amine oxidase [flavin-c 71.6 2.2 7.6E-05 44.0 3.4 27 204-230 4-30 (520)
317 3tl3_A Short-chain type dehydr 71.5 2.1 7.3E-05 39.8 2.9 28 203-230 8-36 (257)
318 1h2b_A Alcohol dehydrogenase; 71.5 2.4 8.2E-05 41.9 3.5 27 204-230 187-214 (359)
319 3iwa_A FAD-dependent pyridine 71.4 2.3 7.9E-05 43.4 3.4 27 204-230 3-31 (472)
320 3op4_A 3-oxoacyl-[acyl-carrier 71.4 4.2 0.00015 37.7 5.0 29 202-230 7-36 (248)
321 2jhf_A Alcohol dehydrogenase E 71.1 3.1 0.0001 41.2 4.1 27 204-230 192-219 (374)
322 1pvv_A Otcase, ornithine carba 71.0 31 0.0011 34.0 11.3 36 201-236 152-190 (315)
323 3vku_A L-LDH, L-lactate dehydr 71.0 5.4 0.00018 39.5 5.8 26 203-228 8-33 (326)
324 1yvv_A Amine oxidase, flavin-c 70.8 2.6 8.8E-05 40.2 3.4 26 205-230 3-28 (336)
325 3k30_A Histamine dehydrogenase 70.7 3.7 0.00013 44.5 5.0 31 203-233 390-422 (690)
326 4fc7_A Peroxisomal 2,4-dienoyl 70.7 8 0.00027 36.4 6.9 30 201-230 24-54 (277)
327 3dme_A Conserved exported prot 70.6 2.7 9.3E-05 40.3 3.6 27 204-230 4-30 (369)
328 3nix_A Flavoprotein/dehydrogen 70.6 2.7 9.4E-05 41.6 3.7 27 204-230 5-31 (421)
329 1o94_A Tmadh, trimethylamine d 70.5 4.5 0.00015 44.1 5.7 31 203-233 388-420 (729)
330 2gf3_A MSOX, monomeric sarcosi 70.5 3.2 0.00011 40.4 4.1 26 205-230 4-29 (389)
331 3llv_A Exopolyphosphatase-rela 70.4 3 0.0001 35.0 3.3 26 205-230 7-32 (141)
332 3rih_A Short chain dehydrogena 70.4 8 0.00027 37.0 6.9 30 201-230 38-68 (293)
333 2cdc_A Glucose dehydrogenase g 70.2 2.8 9.7E-05 41.4 3.7 27 204-230 181-207 (366)
334 1trb_A Thioredoxin reductase; 70.2 2.6 8.8E-05 39.9 3.2 27 204-230 5-31 (320)
335 2h6e_A ADH-4, D-arabinose 1-de 70.2 2.7 9.1E-05 41.1 3.4 27 204-230 171-199 (344)
336 3ruf_A WBGU; rossmann fold, UD 70.2 11 0.00036 36.3 7.7 28 203-230 24-52 (351)
337 2zbw_A Thioredoxin reductase; 70.2 2.8 9.7E-05 40.0 3.5 27 204-230 5-31 (335)
338 3gem_A Short chain dehydrogena 70.1 3.2 0.00011 39.0 3.9 29 202-230 25-54 (260)
339 2dq4_A L-threonine 3-dehydroge 70.1 2.8 9.6E-05 41.0 3.5 28 203-230 164-192 (343)
340 3cty_A Thioredoxin reductase; 70.0 2.9 9.8E-05 39.8 3.5 27 204-230 16-42 (319)
341 2w37_A Ornithine carbamoyltran 70.0 13 0.00043 37.5 8.4 36 201-236 173-212 (359)
342 3sc4_A Short chain dehydrogena 70.0 23 0.00078 33.4 9.9 29 202-230 7-36 (285)
343 3oc4_A Oxidoreductase, pyridin 70.0 3 0.0001 42.4 3.9 26 205-230 3-30 (452)
344 3slg_A PBGP3 protein; structur 69.9 7 0.00024 38.0 6.4 29 202-230 22-52 (372)
345 2fzw_A Alcohol dehydrogenase c 69.9 2.7 9.2E-05 41.5 3.4 27 204-230 191-218 (373)
346 1hyu_A AHPF, alkyl hydroperoxi 69.9 4.5 0.00015 42.2 5.3 28 203-230 211-238 (521)
347 3csu_A Protein (aspartate carb 69.9 22 0.00075 35.0 9.9 36 201-236 151-192 (310)
348 3kd9_A Coenzyme A disulfide re 69.8 3.3 0.00011 41.9 4.1 27 204-230 3-31 (449)
349 2iz1_A 6-phosphogluconate dehy 69.7 1.3 4.6E-05 45.9 1.2 26 205-230 6-31 (474)
350 2q7v_A Thioredoxin reductase; 69.6 3 0.0001 39.8 3.5 27 204-230 8-34 (325)
351 3tz6_A Aspartate-semialdehyde 69.6 5.4 0.00018 39.9 5.5 36 302-347 61-97 (344)
352 2vvm_A Monoamine oxidase N; FA 69.6 3 0.0001 42.5 3.8 26 205-230 40-65 (495)
353 1zem_A Xylitol dehydrogenase; 69.5 11 0.00037 35.0 7.4 29 202-230 5-34 (262)
354 3h8l_A NADH oxidase; membrane 69.4 2.8 9.7E-05 41.7 3.5 26 205-230 2-30 (409)
355 4id9_A Short-chain dehydrogena 69.3 3 0.0001 40.2 3.5 30 201-230 16-46 (347)
356 1geg_A Acetoin reductase; SDR 69.3 7.7 0.00026 35.9 6.3 26 205-230 3-29 (256)
357 2rhc_B Actinorhodin polyketide 69.2 8 0.00027 36.4 6.5 29 202-230 20-49 (277)
358 3rd5_A Mypaa.01249.C; ssgcid, 69.2 4.9 0.00017 38.1 5.0 30 201-230 13-43 (291)
359 3nks_A Protoporphyrinogen oxid 69.2 3.4 0.00012 41.7 4.0 26 205-230 3-30 (477)
360 1rjw_A ADH-HT, alcohol dehydro 69.2 3 0.0001 40.8 3.5 27 204-230 165-191 (339)
361 1yb1_A 17-beta-hydroxysteroid 69.2 9.1 0.00031 35.8 6.8 30 201-230 28-58 (272)
362 3fpc_A NADP-dependent alcohol 69.1 3.1 0.00011 40.8 3.7 27 204-230 167-194 (352)
363 3vtz_A Glucose 1-dehydrogenase 69.1 5.8 0.0002 37.4 5.4 30 201-230 11-41 (269)
364 2wsb_A Galactitol dehydrogenas 69.0 4.6 0.00016 37.0 4.6 28 203-230 10-38 (254)
365 2dph_A Formaldehyde dismutase; 69.0 2.9 9.8E-05 41.9 3.4 27 204-230 186-213 (398)
366 1fl2_A Alkyl hydroperoxide red 69.0 3.2 0.00011 39.1 3.6 26 205-230 2-27 (310)
367 3b1f_A Putative prephenate deh 68.9 2.2 7.7E-05 40.5 2.5 27 204-230 6-34 (290)
368 1xhc_A NADH oxidase /nitrite r 68.9 4 0.00014 40.4 4.5 30 204-234 8-39 (367)
369 3c85_A Putative glutathione-re 68.9 3 0.0001 36.7 3.2 29 202-230 37-66 (183)
370 1xhl_A Short-chain dehydrogena 68.9 2.9 9.8E-05 40.2 3.3 28 203-230 25-53 (297)
371 2ivd_A PPO, PPOX, protoporphyr 68.8 2.9 9.9E-05 42.3 3.4 28 203-230 15-42 (478)
372 4dyv_A Short-chain dehydrogena 68.6 4.3 0.00015 38.4 4.5 28 203-230 27-55 (272)
373 2hmt_A YUAA protein; RCK, KTN, 68.6 2.9 9.9E-05 34.5 2.9 27 204-230 6-32 (144)
374 3c96_A Flavin-containing monoo 68.6 3.1 0.00011 41.4 3.6 27 204-230 4-31 (410)
375 3d3w_A L-xylulose reductase; u 68.5 8.8 0.0003 34.9 6.4 28 203-230 6-34 (244)
376 3v2g_A 3-oxoacyl-[acyl-carrier 68.5 5.6 0.00019 37.6 5.2 30 201-230 28-58 (271)
377 3pqe_A L-LDH, L-lactate dehydr 68.4 11 0.00039 37.1 7.6 26 203-228 4-29 (326)
378 2x3n_A Probable FAD-dependent 68.4 3 0.0001 41.1 3.4 27 204-230 6-32 (399)
379 3p19_A BFPVVD8, putative blue 68.3 7.8 0.00027 36.4 6.2 28 203-230 15-43 (266)
380 2cul_A Glucose-inhibited divis 68.2 3.2 0.00011 38.1 3.3 26 205-230 4-29 (232)
381 1y56_B Sarcosine oxidase; dehy 68.2 3.8 0.00013 40.0 4.1 31 204-234 5-37 (382)
382 4gcm_A TRXR, thioredoxin reduc 68.2 4.1 0.00014 38.6 4.2 29 202-230 143-171 (312)
383 2d8a_A PH0655, probable L-thre 68.2 3 0.0001 40.9 3.3 27 204-230 168-195 (348)
384 4fs3_A Enoyl-[acyl-carrier-pro 68.1 4.7 0.00016 37.8 4.5 30 201-230 3-35 (256)
385 4eso_A Putative oxidoreductase 68.1 4.1 0.00014 38.0 4.1 29 202-230 6-35 (255)
386 3ab1_A Ferredoxin--NADP reduct 68.1 4 0.00014 39.5 4.2 27 204-230 14-40 (360)
387 2nqt_A N-acetyl-gamma-glutamyl 68.0 5.8 0.0002 39.7 5.4 38 302-349 78-115 (352)
388 3l9w_A Glutathione-regulated p 67.9 4.3 0.00015 41.4 4.5 27 204-230 4-30 (413)
389 1xyg_A Putative N-acetyl-gamma 67.8 12 0.00042 37.3 7.8 36 303-348 81-116 (359)
390 2oln_A NIKD protein; flavoprot 67.8 3.3 0.00011 40.8 3.6 26 205-230 5-30 (397)
391 2q0l_A TRXR, thioredoxin reduc 67.8 3.3 0.00011 39.1 3.4 26 205-230 2-28 (311)
392 4imr_A 3-oxoacyl-(acyl-carrier 67.8 8 0.00027 36.5 6.1 29 202-230 31-60 (275)
393 2bry_A NEDD9 interacting prote 67.8 3.9 0.00013 42.4 4.3 28 203-230 91-118 (497)
394 1uls_A Putative 3-oxoacyl-acyl 67.6 7.3 0.00025 35.9 5.7 27 204-230 5-32 (245)
395 3qj4_A Renalase; FAD/NAD(P)-bi 67.5 3.5 0.00012 39.8 3.6 26 205-230 2-30 (342)
396 3h28_A Sulfide-quinone reducta 67.5 4.9 0.00017 40.4 4.8 30 205-234 3-36 (430)
397 3pk0_A Short-chain dehydrogena 67.4 6.2 0.00021 36.8 5.3 29 202-230 8-37 (262)
398 3ihm_A Styrene monooxygenase A 67.4 3.5 0.00012 41.7 3.7 26 205-230 23-48 (430)
399 2jl1_A Triphenylmethane reduct 67.4 5.3 0.00018 37.1 4.8 25 206-230 2-29 (287)
400 3afn_B Carbonyl reductase; alp 67.2 9.1 0.00031 34.9 6.3 28 203-230 6-34 (258)
401 1f8f_A Benzyl alcohol dehydrog 67.2 3.3 0.00011 40.9 3.4 27 204-230 191-218 (371)
402 1vdc_A NTR, NADPH dependent th 67.1 3.1 0.00011 39.7 3.1 27 204-230 8-34 (333)
403 1xq6_A Unknown protein; struct 67.1 9.9 0.00034 34.2 6.5 27 204-230 4-33 (253)
404 2ae2_A Protein (tropinone redu 67.1 9 0.00031 35.5 6.3 28 203-230 8-36 (260)
405 3ftp_A 3-oxoacyl-[acyl-carrier 67.0 3.4 0.00012 39.1 3.3 30 201-230 25-55 (270)
406 3sju_A Keto reductase; short-c 67.0 5.5 0.00019 37.7 4.8 27 204-230 24-51 (279)
407 3ef6_A Toluene 1,2-dioxygenase 66.7 3.7 0.00013 41.1 3.7 25 205-229 3-27 (410)
408 1id1_A Putative potassium chan 66.7 4.4 0.00015 34.6 3.7 27 204-230 3-29 (153)
409 3cgv_A Geranylgeranyl reductas 66.6 3.6 0.00012 40.1 3.5 26 205-230 5-30 (397)
410 1ae1_A Tropinone reductase-I; 66.5 8 0.00027 36.3 5.9 29 202-230 19-48 (273)
411 4a5l_A Thioredoxin reductase; 66.5 4.7 0.00016 37.9 4.2 28 203-230 151-178 (314)
412 3i6i_A Putative leucoanthocyan 66.5 5.9 0.0002 38.3 5.0 27 204-230 10-37 (346)
413 4amu_A Ornithine carbamoyltran 66.5 61 0.0021 32.6 12.5 36 201-236 177-216 (365)
414 2yg5_A Putrescine oxidase; oxi 66.4 3.6 0.00012 41.3 3.5 27 204-230 5-31 (453)
415 3oec_A Carveol dehydrogenase ( 66.4 8.8 0.0003 37.0 6.3 30 201-230 43-73 (317)
416 3l6e_A Oxidoreductase, short-c 66.4 6.3 0.00022 36.2 5.0 26 205-230 4-30 (235)
417 1zk7_A HGII, reductase, mercur 66.3 4.4 0.00015 41.2 4.2 31 204-234 4-36 (467)
418 3ntd_A FAD-dependent pyridine 66.3 3.9 0.00013 42.6 3.9 26 205-230 2-29 (565)
419 3tjr_A Short chain dehydrogena 66.2 5.4 0.00019 38.2 4.7 30 201-230 28-58 (301)
420 3v76_A Flavoprotein; structura 66.2 3.4 0.00011 42.1 3.3 27 204-230 27-53 (417)
421 1sez_A Protoporphyrinogen oxid 66.2 4.4 0.00015 41.3 4.2 27 204-230 13-39 (504)
422 1mld_A Malate dehydrogenase; o 66.1 12 0.0004 36.6 7.1 23 205-227 1-24 (314)
423 4g6h_A Rotenone-insensitive NA 66.1 4.3 0.00015 42.3 4.2 31 205-235 43-75 (502)
424 2vdc_G Glutamate synthase [NAD 66.1 3.4 0.00012 42.6 3.3 27 204-230 122-148 (456)
425 2ew8_A (S)-1-phenylethanol deh 66.1 15 0.00051 33.8 7.5 29 202-230 5-34 (249)
426 1vkn_A N-acetyl-gamma-glutamyl 66.0 6.2 0.00021 39.6 5.1 36 302-348 76-111 (351)
427 3i1j_A Oxidoreductase, short c 65.9 6.3 0.00022 36.0 4.9 30 201-230 11-41 (247)
428 3sx2_A Putative 3-ketoacyl-(ac 65.8 6 0.00021 37.1 4.8 30 201-230 10-40 (278)
429 3fpz_A Thiazole biosynthetic e 65.8 3.7 0.00013 39.6 3.4 27 204-230 65-93 (326)
430 1xa0_A Putative NADPH dependen 65.8 3.6 0.00012 39.8 3.3 25 206-230 152-177 (328)
431 4gde_A UDP-galactopyranose mut 65.7 2.8 9.6E-05 42.6 2.6 27 204-230 10-37 (513)
432 3dii_A Short-chain dehydrogena 65.7 6.6 0.00023 36.3 5.0 26 205-230 3-29 (247)
433 1c0p_A D-amino acid oxidase; a 65.7 4.5 0.00015 39.3 4.0 27 204-230 6-32 (363)
434 3fwz_A Inner membrane protein 65.7 5.8 0.0002 33.4 4.3 26 205-230 8-33 (140)
435 1zsy_A Mitochondrial 2-enoyl t 65.6 2.9 9.9E-05 41.2 2.6 27 204-230 168-195 (357)
436 3rft_A Uronate dehydrogenase; 65.6 7.8 0.00027 36.1 5.5 26 205-230 4-30 (267)
437 1vj0_A Alcohol dehydrogenase, 65.6 4.6 0.00016 40.2 4.1 27 204-230 196-223 (380)
438 3i6d_A Protoporphyrinogen oxid 65.4 2.5 8.7E-05 42.3 2.2 24 204-227 5-28 (470)
439 2a87_A TRXR, TR, thioredoxin r 65.4 3.5 0.00012 39.6 3.1 27 204-230 14-40 (335)
440 3lyl_A 3-oxoacyl-(acyl-carrier 65.4 3.3 0.00011 38.0 2.8 28 203-230 4-32 (247)
441 1gu7_A Enoyl-[acyl-carrier-pro 65.4 3.1 0.00011 40.9 2.8 26 205-230 169-195 (364)
442 3tqh_A Quinone oxidoreductase; 65.3 3.7 0.00013 39.7 3.3 27 204-230 153-180 (321)
443 1w6u_A 2,4-dienoyl-COA reducta 65.3 7.7 0.00026 36.6 5.5 29 202-230 24-53 (302)
444 2xve_A Flavin-containing monoo 65.3 3.9 0.00013 41.9 3.6 25 205-229 3-30 (464)
445 2ozp_A N-acetyl-gamma-glutamyl 65.3 17 0.00059 36.0 8.2 36 303-348 67-103 (345)
446 3c4a_A Probable tryptophan hyd 65.2 3.6 0.00012 40.5 3.3 25 206-230 2-28 (381)
447 3e03_A Short chain dehydrogena 65.1 15 0.00051 34.4 7.5 29 202-230 4-33 (274)
448 3tfo_A Putative 3-oxoacyl-(acy 65.0 5.2 0.00018 37.8 4.2 26 205-230 5-31 (264)
449 3dje_A Fructosyl amine: oxygen 64.9 4 0.00014 40.8 3.5 27 204-230 6-33 (438)
450 3gvc_A Oxidoreductase, probabl 64.9 5.1 0.00017 38.0 4.1 30 201-230 26-56 (277)
451 3kvo_A Hydroxysteroid dehydrog 64.9 31 0.0011 33.8 10.1 30 201-230 42-72 (346)
452 3ojo_A CAP5O; rossmann fold, c 64.9 7.2 0.00025 40.1 5.5 27 204-230 11-37 (431)
453 1iz0_A Quinone oxidoreductase; 64.8 3.9 0.00013 39.1 3.3 27 204-230 126-153 (302)
454 3oh8_A Nucleoside-diphosphate 64.7 8.7 0.0003 39.8 6.2 27 204-230 147-174 (516)
455 3v8b_A Putative dehydrogenase, 64.6 9.1 0.00031 36.3 5.9 28 203-230 27-55 (283)
456 2qae_A Lipoamide, dihydrolipoy 64.5 4 0.00014 41.5 3.5 30 205-234 3-34 (468)
457 4dmm_A 3-oxoacyl-[acyl-carrier 64.5 5.3 0.00018 37.6 4.1 30 201-230 25-55 (269)
458 3lf2_A Short chain oxidoreduct 64.5 9.4 0.00032 35.6 5.9 30 201-230 5-35 (265)
459 4f2g_A Otcase 1, ornithine car 64.4 13 0.00044 36.6 7.0 63 164-236 122-189 (309)
460 4a2c_A Galactitol-1-phosphate 64.4 4.7 0.00016 39.2 3.8 28 203-230 160-187 (346)
461 2vn8_A Reticulon-4-interacting 64.3 5.7 0.0002 39.3 4.5 27 204-230 184-211 (375)
462 3ehe_A UDP-glucose 4-epimerase 64.2 16 0.00055 34.4 7.6 25 206-230 3-28 (313)
463 1tt7_A YHFP; alcohol dehydroge 64.2 4 0.00014 39.5 3.3 25 206-230 153-178 (330)
464 2r00_A Aspartate-semialdehyde 64.1 8.7 0.0003 38.0 5.8 35 303-347 64-99 (336)
465 2uzz_A N-methyl-L-tryptophan o 64.1 3.4 0.00012 40.1 2.7 26 205-230 3-28 (372)
466 1pjq_A CYSG, siroheme synthase 64.0 6 0.0002 40.8 4.7 34 202-235 10-45 (457)
467 1yo6_A Putative carbonyl reduc 64.0 18 0.00062 32.5 7.6 26 205-230 4-32 (250)
468 1x1t_A D(-)-3-hydroxybutyrate 64.0 9.7 0.00033 35.3 5.8 26 205-230 5-31 (260)
469 2xxj_A L-LDH, L-lactate dehydr 63.9 5 0.00017 39.3 3.9 23 205-227 1-23 (310)
470 3ps9_A TRNA 5-methylaminomethy 63.8 6.1 0.00021 42.4 4.9 26 205-230 273-298 (676)
471 3r7f_A Aspartate carbamoyltran 63.8 13 0.00046 36.4 7.0 36 201-236 144-184 (304)
472 2zqz_A L-LDH, L-lactate dehydr 63.7 3.1 0.00011 41.1 2.4 26 203-228 8-33 (326)
473 1ez4_A Lactate dehydrogenase; 63.7 3.2 0.00011 40.8 2.5 25 204-228 5-29 (318)
474 3l8k_A Dihydrolipoyl dehydroge 63.7 5.3 0.00018 40.7 4.2 28 205-232 5-34 (466)
475 3v2h_A D-beta-hydroxybutyrate 63.7 11 0.00037 35.7 6.2 30 201-230 22-52 (281)
476 3nyw_A Putative oxidoreductase 63.5 4 0.00014 38.0 3.0 28 203-230 6-34 (250)
477 1lvl_A Dihydrolipoamide dehydr 63.5 3.8 0.00013 41.8 3.1 32 204-235 5-38 (458)
478 2hqm_A GR, grase, glutathione 63.4 4.3 0.00015 41.6 3.5 31 204-234 11-43 (479)
479 3qiv_A Short-chain dehydrogena 63.2 6.9 0.00024 36.0 4.6 29 202-230 7-36 (253)
480 1nhp_A NADH peroxidase; oxidor 63.2 4.3 0.00015 41.1 3.4 31 205-235 1-35 (447)
481 3lk7_A UDP-N-acetylmuramoylala 63.2 4.9 0.00017 41.2 3.9 29 202-230 7-35 (451)
482 3lxd_A FAD-dependent pyridine 63.1 4.4 0.00015 40.5 3.4 26 204-229 9-34 (415)
483 2uvd_A 3-oxoacyl-(acyl-carrier 63.1 10 0.00036 34.7 5.8 27 204-230 4-31 (246)
484 3lov_A Protoporphyrinogen oxid 63.1 4.9 0.00017 40.6 3.8 27 204-230 4-32 (475)
485 4dpk_A Malonyl-COA/succinyl-CO 63.0 9.4 0.00032 38.2 5.8 37 302-348 77-114 (359)
486 4dpl_A Malonyl-COA/succinyl-CO 63.0 9.4 0.00032 38.2 5.8 37 302-348 77-114 (359)
487 3gd5_A Otcase, ornithine carba 63.0 40 0.0014 33.3 10.3 36 201-236 154-192 (323)
488 3ctm_A Carbonyl reductase; alc 62.9 8.9 0.0003 35.8 5.4 29 202-230 32-61 (279)
489 2q3e_A UDP-glucose 6-dehydroge 62.9 4.2 0.00014 42.0 3.3 26 205-230 6-33 (467)
490 2r6j_A Eugenol synthase 1; phe 62.9 10 0.00035 36.0 5.9 26 205-230 12-38 (318)
491 1ps9_A 2,4-dienoyl-COA reducta 62.9 6.5 0.00022 42.3 4.9 27 204-230 373-399 (671)
492 3gaz_A Alcohol dehydrogenase s 62.9 6.2 0.00021 38.6 4.4 27 204-230 151-178 (343)
493 1k0i_A P-hydroxybenzoate hydro 62.8 3.3 0.00011 40.7 2.4 26 205-230 3-28 (394)
494 1yde_A Retinal dehydrogenase/r 62.6 21 0.00073 33.3 8.0 29 202-230 7-36 (270)
495 2c5a_A GDP-mannose-3', 5'-epim 62.5 12 0.00042 36.6 6.6 27 204-230 29-56 (379)
496 3o0h_A Glutathione reductase; 62.5 4.6 0.00016 41.4 3.5 26 205-230 27-52 (484)
497 1cjc_A Protein (adrenodoxin re 62.5 4.5 0.00015 41.6 3.5 28 203-230 5-34 (460)
498 1sny_A Sniffer CG10964-PA; alp 62.5 24 0.00083 32.3 8.3 30 201-230 18-51 (267)
499 2x5o_A UDP-N-acetylmuramoylala 62.5 4.2 0.00014 41.5 3.2 28 203-230 4-31 (439)
500 2c07_A 3-oxoacyl-(acyl-carrier 62.4 22 0.00074 33.4 8.1 29 202-230 42-71 (285)
No 1
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=100.00 E-value=1.6e-76 Score=608.39 Aligned_cols=347 Identities=23% Similarity=0.299 Sum_probs=290.6
Q ss_pred CCCcEEEEeeccCCCCCcceecChHHHHHHHHcCCCCCCeeEEEEcCCCCCCCCchhhhhcCcEEccc-cc-c--ccE-E
Q 012946 2 LDNGVVGILAETSNKWERRAPLTPSHCSRLLLAGRQKSGVARILVQPSTKRIFNDAQYEEAGCEITSD-LS-E--CGL-I 76 (452)
Q Consensus 2 ~~~~~IGi~kE~~~~~ErRvaLtP~~v~~L~~~G~~~~~~~~V~VE~gag~~FsD~eY~~aGa~I~~~-~~-~--~di-I 76 (452)
|++|+||||||++ +||+||||||++|++|+++|| +|+||+|++++|+|++|++|||+|+++ +| + ||+ |
T Consensus 22 m~~m~IGvpkE~k-~~E~RValtP~~V~~L~~~G~------~V~VE~gA~a~f~D~~Y~~AGA~I~~~~~~~~a~aDi~I 94 (394)
T 2qrj_A 22 MAAVTLHLRAETK-PLEARAALTPTTVKKLIAKGF------KIYVEDSPQSTFNINEYRQAGAIIVPAGSWKTAPRDRII 94 (394)
T ss_dssp --CCEEEECCCCS-TTCCCCSSCHHHHHHHHHTTC------EEEEECCSSCSSCHHHHHHTTCEEECTTGGGGSCTTSEE
T ss_pred CcceEEEEEcCCC-CCCceeccCHHHHHHHHhCCC------EEEEeCCCCCCCCHHHHHhCCcEEechhhhhcCCCCeEE
Confidence 3568999999999 599999999999999999995 999999999999999999999999975 44 3 886 9
Q ss_pred EEecCCCc-ccccCCCceEEEecccCCCCCCHHHHHHHHHcCCeEEEeecccccCCCccccchhHHHHHHHHHHHHHHHH
Q 012946 77 LGIKKPKL-EMILPDRAYAFFSHTHKAQPENMALLDKILAQRVSLFDYELVEGNQGKRRLIAFGKFAGRAAIIDLLKGLG 155 (452)
Q Consensus 77 l~Vkep~~-~~l~~~~~~~~fs~~~~~q~~n~~ll~~l~~k~it~i~~E~i~~~~g~~~L~s~~~~AG~~avi~al~~~g 155 (452)
||||||++ +++.+++++++|+|+|++|++|++++++|+++|+|+||||.|++++|+| |++||+||||+|+++|++.||
T Consensus 95 lkVkeP~~~~e~~~~~~~i~f~~~~~~q~~~~~l~~~l~~~~it~ia~E~v~~~~g~r-L~sf~~iAG~~av~~a~~~lg 173 (394)
T 2qrj_A 95 IGLKEMPETDTFPLVHEHIQFAHCYKDQAGWQNVLMRFIKGHGTLYDLEFLENDQGRR-VAAFGFYAGFAGAALGVRDWA 173 (394)
T ss_dssp ECSSCCCTTCCSCCCSEEEECCCCSSCCTTHHHHHHHHHHHTCEEEEGGGCBCTTSCB-SCCCHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCcHHhhccCCcEEEEechhhccccCHHHHHHHHHCCCeEEEeeccCcCCCCE-EeehhhHhHHHHHHHHHHHHH
Confidence 99999999 9998899999999999998889999999999999999999999999988 999999999999999999999
Q ss_pred HHHhhcCCCCCcccccccccCccHHHHHHHHHHhhHHHHhcCCCCCCCCceEEEEcC-cHHHHHHHHHHhcCCC---EEe
Q 012946 156 QRYLNLGYSTPFLTLGAAYMYPSLAAAKAAIISVGEEIATEGLPSGICPLVFVFTGS-GHASIAAQELFKLLPH---TFV 231 (452)
Q Consensus 156 ~~~l~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~G~~~~i~p~kv~V~G~-G~vg~gAi~~a~~LGa---~vv 231 (452)
.+++..+. .+| +....|.|..++++++++. +..++. .+.+|+||+|||+ |+||++|+++|++||| .|
T Consensus 174 ~~~~g~~g-~~l---~~~~pm~s~~al~q~~~~~---l~~~~~-~g~~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V- 244 (394)
T 2qrj_A 174 FKQTHSDD-EDL---PAVSPYPNEKALVKDVTKD---YKEALA-TGARKPTVLIIGALGRCGSGAIDLLHKVGIPDANI- 244 (394)
T ss_dssp HHHHSCTT-CCC---CCCCCCSSHHHHHHHHHHH---HHHHHT-TTCCCCCEEEETTTSHHHHHHHHHHHHTTCCGGGE-
T ss_pred HhhcCCcc-ccC---CCccCccCHHHHHHHHHHH---Hhhhhc-cCCCCCeEEEEcCCCHHHHHHHHHHHhCCCCcCce-
Confidence 99876532 132 2333477877766666654 332111 2448999999999 9999999999999997 33
Q ss_pred CCCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCCCCCcccccccCcCCcCcchHhhhcCCCcEEEec
Q 012946 232 DPSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSSRAFDKNDYYEHPEQYNPIFHEKIAPYASAIINC 311 (452)
Q Consensus 232 ~~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~ 311 (452)
..+|+.++..|+ +| +.++++||||||
T Consensus 245 -----------------------------------~v~D~~~~~~g~-~~------------------~~i~~aDivIn~ 270 (394)
T 2qrj_A 245 -----------------------------------LKWDIKETSRGG-PF------------------DEIPQADIFINC 270 (394)
T ss_dssp -----------------------------------EEECHHHHTTCS-CC------------------THHHHSSEEEEC
T ss_pred -----------------------------------EEeeccccccCC-ch------------------hhHhhCCEEEEC
Confidence 112332222221 22 235589999999
Q ss_pred cccCCCCCcccCHHHHHHh-hcCCCCeEEEEEeeecCCCCeeee---cccccCCCCEEEeCCCCCCCCCCCCCCCeEEEe
Q 012946 312 IYWEKQFPRLLSTQQLRDL-AQKGCPLVGISDLTCDMEGSIEIL---NQTTTIDSPFFRYDPKNDSYHHDMEGDGIICSV 387 (452)
Q Consensus 312 a~~~~~~P~Lit~e~l~~m-k~gs~~l~vIvDvs~D~gG~iE~~---~~~Tt~~~P~~~~~~~~~~~~~~~~~~gV~~~~ 387 (452)
++|..++|+|||+||+++| |||+ ||||||||+|||||++ +++||+++|+|.++..+ +++|+|||
T Consensus 271 vlig~~aP~Lvt~e~v~~m~k~gs----VIVDVA~D~GG~~et~~f~~~~Tt~~~P~~~~~g~~--------~~~V~~~~ 338 (394)
T 2qrj_A 271 IYLSKPIAPFTNMEKLNNPNRRLR----TVVDVSADTTNPHNPIPIYTVATVFNKPTVLVPTTA--------GPKLSVIS 338 (394)
T ss_dssp CCCCSSCCCSCCHHHHCCTTCCCC----EEEETTCCTTCTTCSSCSCCCCCBTTBCCEEECCSS--------SSCEEEEC
T ss_pred cCcCCCCCcccCHHHHhcCcCCCe----EEEEEecCCCCCcCcccccccCCccCCCEEEECCCC--------CCCEEEEE
Confidence 9997799999999999999 9999 9999999999999973 29999999999987321 35699999
Q ss_pred eCCcCCcchHHHHHHHHHHHHHHHHHhhcccccccCCHHHHhchhhcC
Q 012946 388 VDNLPTEFPKEASQHFGGLLSQFIGSLASVADIAKLPGNLRRACIAHG 435 (452)
Q Consensus 388 vdnLPs~lp~~AS~~fs~~l~~~l~~l~~~~~~~~~~~~l~~a~i~~~ 435 (452)
|||||++||++||++||++++|||..|++. ..+.++++|.+..+
T Consensus 339 v~nlP~~lPrtAS~~~sn~llp~l~~l~~~----~~~~v~~~A~~~~~ 382 (394)
T 2qrj_A 339 IDHLPSLLPREASEFFSHDLLPSLELLPQR----KTAPVWVRAKKLFD 382 (394)
T ss_dssp CTTGGGGSHHHHHHHHHHHHHHHHHTCTTT----TTCHHHHHHHHHHH
T ss_pred eCChhhhhHHHHHHHHHHHHHHHHHHHhcc----CccHHHHHHHHHhh
Confidence 999999999999999999999999999876 45778888876644
No 2
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=100.00 E-value=9.4e-72 Score=572.02 Aligned_cols=342 Identities=19% Similarity=0.260 Sum_probs=280.2
Q ss_pred CCcEEEEeeccCCCCCcceecChHHHHHHHHcCCCCCCeeEEEEcCCCC--CCCCchhhhhcCcEEccccccccEEEEec
Q 012946 3 DNGVVGILAETSNKWERRAPLTPSHCSRLLLAGRQKSGVARILVQPSTK--RIFNDAQYEEAGCEITSDLSECGLILGIK 80 (452)
Q Consensus 3 ~~~~IGi~kE~~~~~ErRvaLtP~~v~~L~~~G~~~~~~~~V~VE~gag--~~FsD~eY~~aGa~I~~~~~~~diIl~Vk 80 (452)
+.|+||||||++ +|||||||||++|++|+++|| +|+||+|+| ++|+|++|++|||+|+ ++|.||+|||||
T Consensus 21 ~~m~IgvpkE~~-~~E~RValtP~~v~~L~~~G~------~V~VE~gaG~~~~f~D~~Y~~aGa~i~-~~~~adiIlkVk 92 (381)
T 3p2y_A 21 SMTLIGVPRESA-EGERRVALVPKVVEKLSARGL------EVVVESAAGAGALFSDADYERAGATIG-DPWPADVVVKVN 92 (381)
T ss_dssp TTCEEEECCCCS-TTCCCCSSCHHHHHHHHHTTC------EEEECTTTTGGGTCCHHHHHHTTCEES-CCTTSSEEECSS
T ss_pred cceEEEEEecCC-CCCceecCCHHHHHHHHhCCC------EEEEeCCCCccCCCChHHHHHCCCEEe-eeecCCEEEEeC
Confidence 568999999999 599999999999999999995 999999997 9999999999999999 566799999999
Q ss_pred CCCcccc-cCCCceEEEecccCCCCCCHHHHHHHHHcCCeEEEeeccccc---CCCccccchhHHHHHHHHHHHHHHHHH
Q 012946 81 KPKLEMI-LPDRAYAFFSHTHKAQPENMALLDKILAQRVSLFDYELVEGN---QGKRRLIAFGKFAGRAAIIDLLKGLGQ 156 (452)
Q Consensus 81 ep~~~~l-~~~~~~~~fs~~~~~q~~n~~ll~~l~~k~it~i~~E~i~~~---~g~~~L~s~~~~AG~~avi~al~~~g~ 156 (452)
+|+++|+ .+++++++|||+|+++ |++++++|+++|+|+|+||.|+|. ++++.|++|+++|||+|+++ |+
T Consensus 93 ~p~~~e~~~l~~g~~l~~~lh~~~--~~~l~~~l~~~~it~ia~E~i~~~~~~~~l~~l~~~s~iAGy~Av~~-----aa 165 (381)
T 3p2y_A 93 PPTSDEISQLKPGSVLIGFLAPRT--QPELASRLRIADVTAFAMESIPRISRAQTMDALSSQANVAGYKAVLL-----GA 165 (381)
T ss_dssp CCCHHHHTTSCTTCEEEECCCTTT--CHHHHHHHHHTTCEEEEGGGCCSSGGGGGGCHHHHHHHHHHHHHHHH-----HH
T ss_pred CCChhHHhhccCCCEEEEEecccc--CHHHHHHHHHCCCeEEEeeccccccccccceeecchhHHHHHHHHHH-----HH
Confidence 9999888 7888999999999998 899999999999999999999985 44555899999999999995 66
Q ss_pred HHhhcCCCCCcccccccccCccHHHHHHHHHHhhHHHHhcCCCCCCCCceEEEEcCcHHHHHHHHHHhcCCCEE--eC--
Q 012946 157 RYLNLGYSTPFLTLGAAYMYPSLAAAKAAIISVGEEIATEGLPSGICPLVFVFTGSGHASIAAQELFKLLPHTF--VD-- 232 (452)
Q Consensus 157 ~~l~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~G~~~~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~-- 232 (452)
.++.+. +|+|+++. ++++|.+|+|+|+|++|++|+++|+++|+.| ++
T Consensus 166 ~~l~~~--~~~l~~~~---------------------------~~v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~ 216 (381)
T 3p2y_A 166 SLSTRF--VPMLTTAA---------------------------GTVKPASALVLGVGVAGLQALATAKRLGAKTTGYDVR 216 (381)
T ss_dssp HHCSSC--SSCEECSS---------------------------CEECCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred HHhhhh--hhhhhccc---------------------------CCcCCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCC
Confidence 655543 36666542 3789999999999999999999999999987 33
Q ss_pred CCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCCCCCccc---cc-ccCcCCcCcchHhhhcCCCcEE
Q 012946 233 PSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSSRAFDKN---DY-YEHPEQYNPIFHEKIAPYASAI 308 (452)
Q Consensus 233 ~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~~~~~~~---~~-~~~~e~y~~~f~~~~~~~~DIv 308 (452)
+.+++++.+ +|.+ +. .+ +. .+++.++|+++ ++ ..+. .. +.+.++.+|||
T Consensus 217 ~~~l~~~~~------------lGa~---~~--~l---~~--~~~~~~gya~~~~~~~~~~~~----~~-l~e~l~~aDIV 269 (381)
T 3p2y_A 217 PEVAEQVRS------------VGAQ---WL--DL---GI--DAAGEGGYARELSEAERAQQQ----QA-LEDAITKFDIV 269 (381)
T ss_dssp GGGHHHHHH------------TTCE---EC--CC---C---------------CHHHHHHHH----HH-HHHHHTTCSEE
T ss_pred HHHHHHHHH------------cCCe---EE--ec---cc--cccccccchhhhhHHHHhhhH----HH-HHHHHhcCCEE
Confidence 334455542 2432 11 11 11 13344567653 11 1111 22 37889999999
Q ss_pred EeccccCC-CCCcccCHHHHHHhhcCCCCeEEEEEeeecCCCCeeeecccccCCCCEEEeCCCCCCCCCCCCCCCeEEEe
Q 012946 309 INCIYWEK-QFPRLLSTQQLRDLAQKGCPLVGISDLTCDMEGSIEILNQTTTIDSPFFRYDPKNDSYHHDMEGDGIICSV 387 (452)
Q Consensus 309 In~a~~~~-~~P~Lit~e~l~~mk~gs~~l~vIvDvs~D~gG~iE~~~~~Tt~~~P~~~~~~~~~~~~~~~~~~gV~~~~ 387 (452)
|+|+++|+ ++|.|||++|++.||||+ ||||+|||+|||||+ +++|+ +|.. +||+|||
T Consensus 270 I~tv~iPg~~ap~Lvt~emv~~MkpGs----VIVDvA~d~GG~~e~-t~~~~----~~~~-------------~gV~~~~ 327 (381)
T 3p2y_A 270 ITTALVPGRPAPRLVTAAAATGMQPGS----VVVDLAGETGGNCEL-TEPGR----TIVH-------------HGVTITS 327 (381)
T ss_dssp EECCCCTTSCCCCCBCHHHHHTSCTTC----EEEETTGGGTCSBTT-CCTTC----EEEE-------------TTEEEEC
T ss_pred EECCCCCCcccceeecHHHHhcCCCCc----EEEEEeCCCCCcccc-ccCCC----eEEE-------------CCEEEEe
Confidence 99999996 899999999999999999 999999999999999 57765 4664 4999999
Q ss_pred eCCcCCcchHHHHHHHHHHHHHHHHHhhcccccc--cCCHHHHhchhhcCCe
Q 012946 388 VDNLPTEFPKEASQHFGGLLSQFIGSLASVADIA--KLPGNLRRACIAHGGA 437 (452)
Q Consensus 388 vdnLPs~lp~~AS~~fs~~l~~~l~~l~~~~~~~--~~~~~l~~a~i~~~G~ 437 (452)
++|||+++|++||++||+|++|||..+.+++.++ ..|++++++++|++|-
T Consensus 328 v~nlP~~vp~tAS~~~s~~l~~~l~~~~~~g~~~~d~~d~i~~~~~~~~~g~ 379 (381)
T 3p2y_A 328 PLNLPATMPEHASELYAKNVTALLDLLLTDDGVAPDFTDEIVAASCITRTEG 379 (381)
T ss_dssp CSCTGGGSHHHHHHHHHHHHHHHHHHHEETTEECCCTTSHHHHHHBSSCC--
T ss_pred eCCCchhhHHHHHHHHHHHHHHHHHHHhhCCCccCCCcchhhhceEEeeCCC
Confidence 9999999999999999999999999999887776 4689999999999983
No 3
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=100.00 E-value=8.9e-72 Score=576.19 Aligned_cols=352 Identities=18% Similarity=0.236 Sum_probs=278.7
Q ss_pred CCcEEEEeeccCCCCCcceecChHHHHHHHHcCCCCCCeeEEEEcCCCC--CCCCchhhhhcCcEEcc-ccc-cccEEEE
Q 012946 3 DNGVVGILAETSNKWERRAPLTPSHCSRLLLAGRQKSGVARILVQPSTK--RIFNDAQYEEAGCEITS-DLS-ECGLILG 78 (452)
Q Consensus 3 ~~~~IGi~kE~~~~~ErRvaLtP~~v~~L~~~G~~~~~~~~V~VE~gag--~~FsD~eY~~aGa~I~~-~~~-~~diIl~ 78 (452)
..|+||||||++ +||+||||||++|++|+++|| +|+||+||| ++|+|++|++|||+|.. +++ +||+|||
T Consensus 24 ~~m~IGvpkE~~-~~E~RValtP~~v~~L~~~G~------~V~VE~gaG~~~~f~D~~Y~~aGa~i~~~~~~~~adiIlk 96 (405)
T 4dio_A 24 VSEIVFIAKESD-PNEGRVAGSVESVKKLKSLGF------DVVVEAGAGLGSRIPDQEYEKAGARVGTAADAKTADVILK 96 (405)
T ss_dssp --CEEEECCCCC-TTCCCCSCCHHHHHHHHHTTC------EEEEETTTTGGGTCCHHHHHHTTCEEECGGGGGGCSEEEE
T ss_pred cceEEEEecCCC-CCCceecCCHHHHHHHHhCCC------EEEEeCCCCccCCCCHHHHHHcCCEEchHHhhccCCEEEE
Confidence 458999999999 699999999999999999995 999999997 99999999999999953 344 7999999
Q ss_pred ecCCCcccc-cCCCceEEEecccCCCCCCHHHHHHHHHcCCeEEEeecccccC---CCccccchhHHHHHHHHHHHHHHH
Q 012946 79 IKKPKLEMI-LPDRAYAFFSHTHKAQPENMALLDKILAQRVSLFDYELVEGNQ---GKRRLIAFGKFAGRAAIIDLLKGL 154 (452)
Q Consensus 79 Vkep~~~~l-~~~~~~~~fs~~~~~q~~n~~ll~~l~~k~it~i~~E~i~~~~---g~~~L~s~~~~AG~~avi~al~~~ 154 (452)
||+|+++++ .+++++++|||+|++| |++++++|+++|+|+||||.|+|.+ +++.|++|+++|||+|+++
T Consensus 97 Vk~p~~~e~~~l~~g~~l~~~lh~~~--~~~l~~~l~~~~it~ia~E~i~r~~ra~~l~~ls~~s~iAGy~Av~~----- 169 (405)
T 4dio_A 97 VRRPSAQEISGYRSGAVVIAIMDPYG--NEEAISAMAGAGLTTFAMELMPRITRAQSMDVLSSQANLAGYQAVID----- 169 (405)
T ss_dssp EECCCTTTGGGSCTTCEEEEECCCTT--CHHHHHHHHHTTCEEEEGGGSCCSGGGGGGCHHHHHHHHHHHHHHHH-----
T ss_pred eCCCChhHHhhcCCCcEEEEEecccc--CHHHHHHHHHCCCeEEEeeccccccccCccceecchhHHHHHHHHHH-----
Confidence 999999998 8888999999999999 9999999999999999999999864 4455899999999999996
Q ss_pred HHHHhhcCCCCCcccccccccCccHHHHHHHHHHhhHHHHhcCCCCCCCCceEEEEcCcHHHHHHHHHHhcCCCEE----
Q 012946 155 GQRYLNLGYSTPFLTLGAAYMYPSLAAAKAAIISVGEEIATEGLPSGICPLVFVFTGSGHASIAAQELFKLLPHTF---- 230 (452)
Q Consensus 155 g~~~l~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~G~~~~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v---- 230 (452)
|+.++.+. +|+|+++. ++++|.+|+|+|+|++|++|+++|+++|+.|
T Consensus 170 aa~~l~~~--~~~l~t~~---------------------------g~v~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D 220 (405)
T 4dio_A 170 AAYEYDRA--LPMMMTAA---------------------------GTVPAAKIFVMGAGVAGLQAIATARRLGAVVSATD 220 (405)
T ss_dssp HHHHCSSC--SSCEEETT---------------------------EEECCCEEEEECCSHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHhHhh--hchhhccC---------------------------CCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEc
Confidence 55555543 36666542 3778999999999999999999999999987
Q ss_pred eCCCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCCCCCccc---ccccCcCCcCcchHhhhcCCCcE
Q 012946 231 VDPSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSSRAFDKN---DYYEHPEQYNPIFHEKIAPYASA 307 (452)
Q Consensus 231 v~~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~~~~~~~---~~~~~~e~y~~~f~~~~~~~~DI 307 (452)
.++.++++..+ ++.+ +. .+...+ .+..++.++|+++ +|.... ..-+.+.++.+||
T Consensus 221 ~~~~~l~~~~~------------~G~~---~~--~~~~~~-~~d~~~~~~ya~e~s~~~~~~~----~~~l~e~l~~aDV 278 (405)
T 4dio_A 221 VRPAAKEQVAS------------LGAK---FI--AVEDEE-FKAAETAGGYAKEMSGEYQVKQ----AALVAEHIAKQDI 278 (405)
T ss_dssp SSTTHHHHHHH------------TTCE---EC--CCCC------------------CHHHHHH----HHHHHHHHHTCSE
T ss_pred CCHHHHHHHHH------------cCCc---ee--eccccc-ccccccccchhhhcchhhhhhh----HhHHHHHhcCCCE
Confidence 33444555542 2332 11 111111 1222344567653 111111 1223788899999
Q ss_pred EEeccccCC-CCCcccCHHHHHHhhcCCCCeEEEEEeeecCCCCeeeecccccCCCCEEEeCCCCCCCCCCCCCCCeEEE
Q 012946 308 IINCIYWEK-QFPRLLSTQQLRDLAQKGCPLVGISDLTCDMEGSIEILNQTTTIDSPFFRYDPKNDSYHHDMEGDGIICS 386 (452)
Q Consensus 308 vIn~a~~~~-~~P~Lit~e~l~~mk~gs~~l~vIvDvs~D~gG~iE~~~~~Tt~~~P~~~~~~~~~~~~~~~~~~gV~~~ 386 (452)
||+|+++|+ ++|+|||++|++.||||+ ||||+|||+|||||+ +++|+ .|.. +||+||
T Consensus 279 VI~tvlipg~~ap~Lvt~emv~~Mk~Gs----VIVDvA~d~GG~~e~-t~~~~----~~~~-------------~GV~~~ 336 (405)
T 4dio_A 279 VITTALIPGRPAPRLVTREMLDSMKPGS----VVVDLAVERGGNIEG-AEAGK----VTEV-------------GGVRIV 336 (405)
T ss_dssp EEECCCCSSSCCCCCBCHHHHTTSCTTC----EEEETTGGGTCSBTT-CCTTE----EEEE-------------TTEEEE
T ss_pred EEECCcCCCCCCCEEecHHHHhcCCCCC----EEEEEeCCCCCCccc-cCCCC----eEEE-------------CCEEEE
Confidence 999999996 899999999999999999 999999999999999 57765 3444 499999
Q ss_pred eeCCcCCcchHHHHHHHHHHHHHHHHHhhccc--ccc--cCCHHHHhchhhcCCeecCC
Q 012946 387 VVDNLPTEFPKEASQHFGGLLSQFIGSLASVA--DIA--KLPGNLRRACIAHGGALTSL 441 (452)
Q Consensus 387 ~vdnLPs~lp~~AS~~fs~~l~~~l~~l~~~~--~~~--~~~~~l~~a~i~~~G~lt~~ 441 (452)
|++|||+.+|++||++|+++++|||..|++++ .++ ..|++|++++++++|+||++
T Consensus 337 gv~nlP~~vp~tAS~~ls~~~~~~l~~l~~~g~~~~~~~~~d~~l~~~~~~~~G~i~~~ 395 (405)
T 4dio_A 337 GHLNVAGRIAASASLLYAKNLVTFLETMVSKETKALALNMEDELVKATALTHGGAVVHP 395 (405)
T ss_dssp ECSSGGGGGHHHHHHHHHHHHHHHHHTTC-----CCCCCTTSHHHHHHEEEETTEEC--
T ss_pred EeCCCCccCHHHHHHHHHHHHHHHHHHHHhCCcchhcccccChHHhCceEEECCEEcCH
Confidence 99999999999999999999999999998776 344 57999999999999999975
No 4
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=100.00 E-value=1.5e-54 Score=443.00 Aligned_cols=337 Identities=21% Similarity=0.284 Sum_probs=276.2
Q ss_pred cEEEEeeccCCCCCcceecChHHHHHHHHcCCCCCCeeEEEEcCCCC--CCCCchhhhhcCcEEcccc---ccccEEEEe
Q 012946 5 GVVGILAETSNKWERRAPLTPSHCSRLLLAGRQKSGVARILVQPSTK--RIFNDAQYEEAGCEITSDL---SECGLILGI 79 (452)
Q Consensus 5 ~~IGi~kE~~~~~ErRvaLtP~~v~~L~~~G~~~~~~~~V~VE~gag--~~FsD~eY~~aGa~I~~~~---~~~diIl~V 79 (452)
|+||||||+|+ ||+||||||++|++|+++|| +|+||+|+| ++|+|++|+++||+|+++. ++||+|++|
T Consensus 1 m~igv~~e~~~-~E~Rv~~~P~~v~~l~~~g~------~v~ve~~ag~~~~f~d~~y~~aga~i~~~~~~~~~ad~i~~v 73 (361)
T 1pjc_A 1 MEIGVPKEIKN-QEFRVGLSPSSVRTLVEAGH------TVFIETQAGIGAGFADQDYVQAGAQVVPSAKDAWSREMVVKV 73 (361)
T ss_dssp CEEEECCCCST-TCCCCSCCHHHHHHHHTTTC------EEEEETTTTGGGTCCHHHHHHHTCEEESSHHHHHTSSEEECS
T ss_pred CEEEEEccCCC-CCCeeCcCHHHHHHHHhCCC------EEEEeCCCCccCCCCHHHHHHCCCEEECCHHHHhcCCeEEEE
Confidence 79999999995 99999999999999999995 999999998 9999999999999999753 489999999
Q ss_pred cCCCcccc-cCCCceEEEecccCCCCCCHHHHHHHHHcCCeEEEeecccccCCCcc-ccchhHHHHHHHHHHHHHHHHHH
Q 012946 80 KKPKLEMI-LPDRAYAFFSHTHKAQPENMALLDKILAQRVSLFDYELVEGNQGKRR-LIAFGKFAGRAAIIDLLKGLGQR 157 (452)
Q Consensus 80 kep~~~~l-~~~~~~~~fs~~~~~q~~n~~ll~~l~~k~it~i~~E~i~~~~g~~~-L~s~~~~AG~~avi~al~~~g~~ 157 (452)
|+|..+++ ..+.+++.|+|++... |+++++.+.++|++.|++|.|++..+..+ |.++++.||+.|++. |+.
T Consensus 74 ksP~~~~~~~~~~g~~~~~y~~~~~--~~~l~~~l~~~gi~~~~~etvp~k~~~~~~l~~~s~~Ag~~a~~~-----gA~ 146 (361)
T 1pjc_A 74 KEPLPAEYDLMQKDQLLFTYLHLAA--ARELTEQLMRVGLTAIAYETVELPNRSLPLLTPMSIIAGRLSVQF-----GAR 146 (361)
T ss_dssp SCCCGGGGGGCCTTCEEEECCCGGG--CHHHHHHHHHHTCEEEEGGGCCCTTSCCTTTHHHHHHHHHHHHHH-----HHH
T ss_pred CCCCHHHHHhhcCCCEEEEEecccc--CHHHHHHHHHcCCeEEEEeeeEcccCCccccCcchHHHHHHHHHH-----HHH
Confidence 99998877 6667888999999887 79999999999999999999998765444 689999999999985 444
Q ss_pred HhhcCCCCCcccccccccCccHHHHHHHHHHhhHHHHhcCCCCCCCCceEEEEcCcHHHHHHHHHHhcCCCEE--eC--C
Q 012946 158 YLNLGYSTPFLTLGAAYMYPSLAAAKAAIISVGEEIATEGLPSGICPLVFVFTGSGHASIAAQELFKLLPHTF--VD--P 233 (452)
Q Consensus 158 ~l~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~G~~~~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~--~ 233 (452)
.+.+... |+++...++ .+++|.+|+|+|+|.+|++|++.|+.+|++| ++ +
T Consensus 147 nt~~~~~-------------------------g~G~~l~~l-~~l~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 147 FLERQQG-------------------------GRGVLLGGV-PGVKPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp HTSGGGT-------------------------SCCCCTTCB-TTBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred HHhhccC-------------------------CCceeccCC-CCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3321110 112222333 2577899999999999999999999999976 22 2
Q ss_pred CChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCCCCCcccccccCcCCcCcchHhhhcCCCcEEEeccc
Q 012946 234 SRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSSRAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIY 313 (452)
Q Consensus 234 ~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~ 313 (452)
++++++.+. ++..+.. +. .++ ..+ .+.++.+|+||||+.
T Consensus 201 ~r~~~~~~~-----------~~~~~~~-----~~--------------------~~~----~~~-~~~~~~~DvVI~~~~ 239 (361)
T 1pjc_A 201 ERLSYLETL-----------FGSRVEL-----LY--------------------SNS----AEI-ETAVAEADLLIGAVL 239 (361)
T ss_dssp HHHHHHHHH-----------HGGGSEE-----EE--------------------CCH----HHH-HHHHHTCSEEEECCC
T ss_pred HHHHHHHHh-----------hCceeEe-----ee--------------------CCH----HHH-HHHHcCCCEEEECCC
Confidence 334444321 1111000 00 011 111 344567899999999
Q ss_pred cCC-CCCcccCHHHHHHhhcCCCCeEEEEEeeecCCCCeeeecccccCCCCEEEeCCCCCCCCCCCCCCCeEEEeeCCcC
Q 012946 314 WEK-QFPRLLSTQQLRDLAQKGCPLVGISDLTCDMEGSIEILNQTTTIDSPFFRYDPKNDSYHHDMEGDGIICSVVDNLP 392 (452)
Q Consensus 314 ~~~-~~P~Lit~e~l~~mk~gs~~l~vIvDvs~D~gG~iE~~~~~Tt~~~P~~~~~~~~~~~~~~~~~~gV~~~~vdnLP 392 (452)
++. +.|.++++++++.|++|+ +|+|++++.||+||+ +++++++.|.+.++ +|+++|++|||
T Consensus 240 ~~~~~~~~li~~~~~~~~~~g~----~ivdv~~~~gg~~e~-~~~~~~~~~~~~~~-------------~v~~~~~~~lp 301 (361)
T 1pjc_A 240 VPGRRAPILVPASLVEQMRTGS----VIVDVAVDQGGCVET-LHPTSHTQPTYEVF-------------GVVHYGVPNMP 301 (361)
T ss_dssp CTTSSCCCCBCHHHHTTSCTTC----EEEETTCTTCCSBTT-CCCCCSSSCEEEET-------------TEEEECCSCGG
T ss_pred cCCCCCCeecCHHHHhhCCCCC----EEEEEecCCCCCCcc-ccCCCCCCCEEEEC-------------CEEEEEeCCcc
Confidence 985 789999999999999999 999999999999998 68999999999874 99999999999
Q ss_pred CcchHHHHHHHHHHHHHHHHHhhcccccc--cCCHHHHhchhhcCCeecCC
Q 012946 393 TEFPKEASQHFGGLLSQFIGSLASVADIA--KLPGNLRRACIAHGGALTSL 441 (452)
Q Consensus 393 s~lp~~AS~~fs~~l~~~l~~l~~~~~~~--~~~~~l~~a~i~~~G~lt~~ 441 (452)
+.+|+++|..|++++++++..|++.+. + ..|+.|++++++++|++|++
T Consensus 302 ~~~~~~~s~~~~~~~~~~l~~l~~~G~-~~~~~~~~~~~~~~~~~g~~~~~ 351 (361)
T 1pjc_A 302 GAVPWTATQALNNSTLPYVVKLANQGL-KALETDDALAKGLNVQAHRLVHP 351 (361)
T ss_dssp GGCHHHHHHHHHHHHHHHHHHHHHHGG-GGGGTCHHHHHHEEEETTEECCH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhCCc-cccccChHHhcCeEEeCCEEcCH
Confidence 999999999999999999999987765 5 67999999999999999974
No 5
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=100.00 E-value=3.5e-54 Score=443.59 Aligned_cols=354 Identities=17% Similarity=0.237 Sum_probs=270.4
Q ss_pred cEEEEeeccCCCCCcceecChHHHHHHHHcCCCCCCeeEEEEcCCCC--CCCCchhhhhcCcEEccc----cccccEEEE
Q 012946 5 GVVGILAETSNKWERRAPLTPSHCSRLLLAGRQKSGVARILVQPSTK--RIFNDAQYEEAGCEITSD----LSECGLILG 78 (452)
Q Consensus 5 ~~IGi~kE~~~~~ErRvaLtP~~v~~L~~~G~~~~~~~~V~VE~gag--~~FsD~eY~~aGa~I~~~----~~~~diIl~ 78 (452)
|+||||||++ +|||||||||++|++|++.|| +|+||+|+| ++|+|++|++|||+|+++ +.+||+|++
T Consensus 1 m~igv~~e~~-~~E~Rv~l~P~~v~~L~~~G~------~V~ve~~ag~~~~~~d~~y~~aGa~i~~~~~~~~~~adiil~ 73 (384)
T 1l7d_A 1 MKIAIPKERR-PGEDRVAISPEVVKKLVGLGF------EVIVEQGAGVGASITDDALTAAGATIASTAAQALSQADVVWK 73 (384)
T ss_dssp CEEEECCCCS-TTCCCCSCCHHHHHHHHHTTC------EEEEETTTTGGGTCCHHHHHHTTCEEESSHHHHHSSCSEEEE
T ss_pred CEEEEEccCC-CCCcccCCCHHHHHHHHhCCC------EEEEEcCCCccCCCCHHHHHHCCCEEecChhhhhcCCCEEEE
Confidence 7999999999 699999999999999999995 999999997 999999999999999975 347999999
Q ss_pred ecCC-----Ccccc-cCCCceEEEecccCCCCCCHHHHHHHHHcCCeEEEeecccccC---CCccccchhHHHHHHHHHH
Q 012946 79 IKKP-----KLEMI-LPDRAYAFFSHTHKAQPENMALLDKILAQRVSLFDYELVEGNQ---GKRRLIAFGKFAGRAAIID 149 (452)
Q Consensus 79 Vkep-----~~~~l-~~~~~~~~fs~~~~~q~~n~~ll~~l~~k~it~i~~E~i~~~~---g~~~L~s~~~~AG~~avi~ 149 (452)
+|+| +.+++ ..++++.+|+++|+++ |+++++++.++|+++++||.+++.. ....+++++++|||.+++.
T Consensus 74 v~~p~~~~~~~~~i~~l~~~~~~i~~~~~~~--~~~~~~~~~~~gi~~~~~e~~~~~~~~~~l~~l~~~a~~ag~~av~~ 151 (384)
T 1l7d_A 74 VQRPMTAEEGTDEVALIKEGAVLMCHLGALT--NRPVVEALTKRKITAYAMELMPRISRAQSMDILSSQSNLAGYRAVID 151 (384)
T ss_dssp EECCCCGGGSCCGGGGSCTTCEEEEECCGGG--CHHHHHHHHHTTCEEEEGGGCCCSGGGGGGCHHHHHHHHHHHHHHHH
T ss_pred ecCcccccCCHHHHHhhccCCEEEEEecccC--CHHHHHHHHHCCCEEEEeccccccccccccchhhHHHHHHHHHHHHH
Confidence 9999 66666 5666779999999998 8999999999999999999998742 2222689999999999997
Q ss_pred HHHHHHHHHhhcCCCCCcccccccccCccHHHHHHHHHHhhHHHHhcCCCCCCCCceEEEEcCcHHHHHHHHHHhcCCCE
Q 012946 150 LLKGLGQRYLNLGYSTPFLTLGAAYMYPSLAAAKAAIISVGEEIATEGLPSGICPLVFVFTGSGHASIAAQELFKLLPHT 229 (452)
Q Consensus 150 al~~~g~~~l~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~G~~~~i~p~kv~V~G~G~vg~gAi~~a~~LGa~ 229 (452)
+.+.+ .+ .+|++.++ + +++++.+|+|+|+|++|++|+++|+.+|+.
T Consensus 152 ~~~~~-----~~--~~~~~~~~--------------------------~-~~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~ 197 (384)
T 1l7d_A 152 GAYEF-----AR--AFPMMMTA--------------------------A-GTVPPARVLVFGVGVAGLQAIATAKRLGAV 197 (384)
T ss_dssp HHHHC-----SS--CSSCEEET--------------------------T-EEECCCEEEEECCSHHHHHHHHHHHHTTCE
T ss_pred HHHHh-----hh--cccchhcc--------------------------C-CCCCCCEEEEECCCHHHHHHHHHHHHCCCE
Confidence 55433 22 23443322 1 256899999999999999999999999998
Q ss_pred E--eC--CCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCCCCCcccccccCcCCcCcchHhhhcCCC
Q 012946 230 F--VD--PSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSSRAFDKNDYYEHPEQYNPIFHEKIAPYA 305 (452)
Q Consensus 230 v--v~--~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~e~y~~~f~~~~~~~~ 305 (452)
| ++ +.++++.. .++.+ + +.++..+..+ ..+.++|++..-....+.....+ .+.++.+
T Consensus 198 V~~~d~~~~~~~~~~------------~~Ga~---~--~~i~~~~~~~-~~~~~~~~~~~s~~~~~~~~~~l-~~~~~~a 258 (384)
T 1l7d_A 198 VMATDVRAATKEQVE------------SLGGK---F--ITVDDEAMKT-AETAGGYAKEMGEEFRKKQAEAV-LKELVKT 258 (384)
T ss_dssp EEEECSCSTTHHHHH------------HTTCE---E--CCC------------------------CCHHHHH-HHHHTTC
T ss_pred EEEEeCCHHHHHHHH------------HcCCe---E--Eeeccccccc-ccccccchhhcCHHHHhhhHHHH-HHHhCCC
Confidence 7 33 34455544 13432 1 1011111111 22445777631000000000123 6778899
Q ss_pred cEEEeccccCC-CCCcccCHHHHHHhhcCCCCeEEEEEeeecCCCCeeeecccccCCCCEEEeCCCCCCCCCCCCCCCeE
Q 012946 306 SAIINCIYWEK-QFPRLLSTQQLRDLAQKGCPLVGISDLTCDMEGSIEILNQTTTIDSPFFRYDPKNDSYHHDMEGDGII 384 (452)
Q Consensus 306 DIvIn~a~~~~-~~P~Lit~e~l~~mk~gs~~l~vIvDvs~D~gG~iE~~~~~Tt~~~P~~~~~~~~~~~~~~~~~~gV~ 384 (452)
||||+|++||+ ++|.++++++++.|++|+ +|+|++||.||+||+ +++++ .+.. ++|+
T Consensus 259 DvVi~~~~~pg~~~~~li~~~~l~~mk~g~----vivdva~~~gg~~~~-~~~~~----~~~~-------------~~v~ 316 (384)
T 1l7d_A 259 DIAITTALIPGKPAPVLITEEMVTKMKPGS----VIIDLAVEAGGNCPL-SEPGK----IVVK-------------HGVK 316 (384)
T ss_dssp SEEEECCCCTTSCCCCCSCHHHHTTSCTTC----EEEETTGGGTCSSTT-CCTTC----EEEE-------------TTEE
T ss_pred CEEEECCccCCCCCCeeeCHHHHhcCCCCC----EEEEEecCCCCCeec-ccCCc----EEEE-------------CCEE
Confidence 99999999985 689999999999999999 999999999999998 45543 4544 4899
Q ss_pred EEeeCCcCCcchHHHHHHHHHHHHHHHHHhhccc--ccc--cCCHHHHhchhhcCCeecCCC
Q 012946 385 CSVVDNLPTEFPKEASQHFGGLLSQFIGSLASVA--DIA--KLPGNLRRACIAHGGALTSLY 442 (452)
Q Consensus 385 ~~~vdnLPs~lp~~AS~~fs~~l~~~l~~l~~~~--~~~--~~~~~l~~a~i~~~G~lt~~~ 442 (452)
++|++|+|+.+|++||++|+++++||+..|++++ .+. ..|++|++++++++|+||++.
T Consensus 317 i~g~~~~p~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~g~~~~~~ 378 (384)
T 1l7d_A 317 IVGHTNVPSRVAADASPLFAKNLLNFLTPHVDKDTKTLVMKLEDETVSGTCVTRDGAIVHPA 378 (384)
T ss_dssp EECCSSGGGGGHHHHHHHHHHHHHHHHGGGEETTTTEECCCTTCHHHHHHEEEETTEECCC-
T ss_pred EEEeCCCcchhHHHHHHHHHHhHHHHHHHHHhCCcchhhccccCHHHhcCeEEeCCEEcChh
Confidence 9999999999999999999999999999998764 444 579999999999999999863
No 6
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=100.00 E-value=4.8e-54 Score=440.27 Aligned_cols=337 Identities=23% Similarity=0.311 Sum_probs=256.6
Q ss_pred cEEEEeeccCCCCCcceecChHHHHHHHHcCCCCCCeeEEEEcCCCC--CCCCchhhhhcCcEEccc--cccccEEEEec
Q 012946 5 GVVGILAETSNKWERRAPLTPSHCSRLLLAGRQKSGVARILVQPSTK--RIFNDAQYEEAGCEITSD--LSECGLILGIK 80 (452)
Q Consensus 5 ~~IGi~kE~~~~~ErRvaLtP~~v~~L~~~G~~~~~~~~V~VE~gag--~~FsD~eY~~aGa~I~~~--~~~~diIl~Vk 80 (452)
|+||||||+|+ +|+||||||++|++|+++|| +|+||+|+| ++|+|++|.++||+|+++ .++||+|++||
T Consensus 1 m~ig~~~e~~~-~e~Rv~l~P~~v~~L~~~g~------~v~ve~~ag~~~~~~d~~y~~aga~i~~~~~~~~ad~il~vk 73 (369)
T 2eez_A 1 MVIGVPKEIKT-LENRVALTPGGVESLVRRGH------TVLVERGAGEGSGLSDAEYARAGAELVGREEAWGAEMVVKVK 73 (369)
T ss_dssp CEEEECCCCST-TCCCCSSCHHHHHHHHHTTC------EEEEETTTTGGGTCCHHHHHHHTCEEECHHHHTTSSEEECSS
T ss_pred CEEEEEccCCC-CCceeCcCHHHHHHHHhCCC------EEEEeCCCCccCCCCHHHHHHCCCEEecccceecCCEEEEEC
Confidence 79999999995 99999999999999999995 999999997 999999999999999976 55899999999
Q ss_pred CCCcccc-cCCCceEEEecccCCCCCCHHHHHHHHHcCCeEEEeecccccCCCcc-ccchhHHHHHHHHHHHHHHHHHHH
Q 012946 81 KPKLEMI-LPDRAYAFFSHTHKAQPENMALLDKILAQRVSLFDYELVEGNQGKRR-LIAFGKFAGRAAIIDLLKGLGQRY 158 (452)
Q Consensus 81 ep~~~~l-~~~~~~~~fs~~~~~q~~n~~ll~~l~~k~it~i~~E~i~~~~g~~~-L~s~~~~AG~~avi~al~~~g~~~ 158 (452)
+|..+++ .+++++.+|+|+|+++ |+++++++.++|+++|+||.+++..+..+ +++|+++|||.+++.+++.+...+
T Consensus 74 ~p~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~l~~~gi~~ia~e~~~~~~~~~~~l~~~s~~ag~~av~~a~~~l~~~~ 151 (369)
T 2eez_A 74 EPLPEEYGFLREGLILFTYLHLAA--DRGLTEAMLRSGVTGIAYETVQLPDGTLPLLVPMSEVAGRMAPQVGAQFLEKPK 151 (369)
T ss_dssp CCCGGGGGGCCTTCEEEECCCGGG--CHHHHHHHHHHTCEEEEGGGCCCTTCCCTTTHHHHHHHHHHHHHHHHHHTSGGG
T ss_pred CCCHHHHhhcCCCcEEEEEecccC--CHHHHHHHHHCCCeEEEeeccccccCCeeecccchHHHHHHHHHHHHHHHHHhc
Confidence 9998887 6678899999999998 89999999999999999999998755433 799999999999996555543321
Q ss_pred hhcCCCCCcccccccccCccHHHHHHHHHHhhHHHHhcCCCCCCCCceEEEEcCcHHHHHHHHHHhcCCCEE--eC--CC
Q 012946 159 LNLGYSTPFLTLGAAYMYPSLAAAKAAIISVGEEIATEGLPSGICPLVFVFTGSGHASIAAQELFKLLPHTF--VD--PS 234 (452)
Q Consensus 159 l~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~G~~~~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~--~~ 234 (452)
. |+++...|+ +++++.+|+|+|+|.+|+.+++.|+.+|++| ++ ++
T Consensus 152 -~-----------------------------g~~~~~~~~-~~l~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~ 200 (369)
T 2eez_A 152 -G-----------------------------GRGVLLGGV-PGVAPASVVILGGGTVGTNAAKIALGMGAQVTILDVNHK 200 (369)
T ss_dssp -T-----------------------------SCCCCTTCB-TBBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred -C-----------------------------CCceecCCC-CCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHH
Confidence 0 122233444 3688999999999999999999999999987 22 22
Q ss_pred ChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCCCCCcccccccCcCCcCcchHhhhcCCCcEEEecccc
Q 012946 235 RLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSSRAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYW 314 (452)
Q Consensus 235 ~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~ 314 (452)
+++++.+. ++.. +.. ... +++ . +.+.++.+|+||+|+.+
T Consensus 201 ~~~~~~~~-----------~g~~---~~~-~~~---------------------~~~----~-l~~~~~~~DvVi~~~g~ 239 (369)
T 2eez_A 201 RLQYLDDV-----------FGGR---VIT-LTA---------------------TEA----N-IKKSVQHADLLIGAVLV 239 (369)
T ss_dssp HHHHHHHH-----------TTTS---EEE-EEC---------------------CHH----H-HHHHHHHCSEEEECCC-
T ss_pred HHHHHHHh-----------cCce---EEE-ecC---------------------CHH----H-HHHHHhCCCEEEECCCC
Confidence 33333321 2222 110 000 011 1 14456689999999999
Q ss_pred CC-CCCcccCHHHHHHhhcCCCCeEEEEEeeecCCCCeeeecccccCCCCEEEeCCCCCCCCCCCCCCCeEEEeeCCcCC
Q 012946 315 EK-QFPRLLSTQQLRDLAQKGCPLVGISDLTCDMEGSIEILNQTTTIDSPFFRYDPKNDSYHHDMEGDGIICSVVDNLPT 393 (452)
Q Consensus 315 ~~-~~P~Lit~e~l~~mk~gs~~l~vIvDvs~D~gG~iE~~~~~Tt~~~P~~~~~~~~~~~~~~~~~~gV~~~~vdnLPs 393 (452)
+. +.|.++++++++.|++|+ +|||++++.||+|++ .+|++++.|.+.++ +|+++|++|||+
T Consensus 240 ~~~~~~~li~~~~l~~mk~gg----~iV~v~~~~gg~~d~-~ep~~~~~~~~~~~-------------~v~~~~v~~lp~ 301 (369)
T 2eez_A 240 PGAKAPKLVTRDMLSLMKEGA----VIVDVAVDQGGCVET-IRPTTHAEPTYVVD-------------GVVHYGVANMPG 301 (369)
T ss_dssp ------CCSCHHHHTTSCTTC----EEEECC--------------------CEET-------------TEEEECCSCSGG
T ss_pred CccccchhHHHHHHHhhcCCC----EEEEEecCCCCCCCc-ccCCCCCCCEEEEC-------------CEEEEeeCCcch
Confidence 86 789999999999999999 999999999999998 58999999988864 899999999999
Q ss_pred cchHHHHHHHHHHHHHHHHHhhcccccc--cCCHHHHhchhhcCCeecCC
Q 012946 394 EFPKEASQHFGGLLSQFIGSLASVADIA--KLPGNLRRACIAHGGALTSL 441 (452)
Q Consensus 394 ~lp~~AS~~fs~~l~~~l~~l~~~~~~~--~~~~~l~~a~i~~~G~lt~~ 441 (452)
.+|++||..|++++++++..++..+. + ..++.+++++.+++|+++++
T Consensus 302 ~~p~~as~~~~~~~~~~l~~l~~~g~-~~~~~~~~l~~~~~~~~G~~~~~ 350 (369)
T 2eez_A 302 AVPRTSTFALTNQTLPYVLKLAEKGL-DALLEDAALLKGLNTHKGRLTHP 350 (369)
T ss_dssp GSHHHHHHHHHHHHHHHHHHHHHHTT-HHHHSCHHHHTTEEEETTEECCH
T ss_pred hcHHHHHHHHHHHHHHHHHHHHhcCh-hhhhcChHHhcCEEeeCCEEcCH
Confidence 99999999999999999999887654 4 67889999999999999864
No 7
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=100.00 E-value=2.2e-53 Score=437.03 Aligned_cols=338 Identities=24% Similarity=0.314 Sum_probs=276.5
Q ss_pred cEEEEeeccCCCCCcceecChHHHHHHHHcCCCCCCeeEEEEcCCCC--CCCCchhhhhcCcEEcccc---c-cccEEEE
Q 012946 5 GVVGILAETSNKWERRAPLTPSHCSRLLLAGRQKSGVARILVQPSTK--RIFNDAQYEEAGCEITSDL---S-ECGLILG 78 (452)
Q Consensus 5 ~~IGi~kE~~~~~ErRvaLtP~~v~~L~~~G~~~~~~~~V~VE~gag--~~FsD~eY~~aGa~I~~~~---~-~~diIl~ 78 (452)
|+||||||+|+ ||+||||||++|++|+++|| +|+||+|+| ++|+|++|+++||+|+++. + +||+|++
T Consensus 1 m~igv~~e~~~-~E~Rv~ltP~~v~~L~~~G~------~V~ve~~ag~~~~f~d~~y~~aGa~i~~~~~~~~~~adii~~ 73 (377)
T 2vhw_A 1 MRVGIPTETKN-NEFRVAITPAGVAELTRRGH------EVLIQAGAGEGSAITDADFKAAGAQLVGTADQVWADADLLLK 73 (377)
T ss_dssp CEEEECCCCST-TCCCCSCCHHHHHHHHHTTC------EEEEETTTTGGGTCCHHHHHHHTCEEESCHHHHHHHCSEEEC
T ss_pred CEEEEEccCCC-CCcccCcCHHHHHHHHhCCC------EEEEeCCCCcCCCCCHHHHHHCCCEEecCHHHHhccCCEEEE
Confidence 79999999995 99999999999999999995 999999996 9999999999999999753 3 6999999
Q ss_pred ecCCCcccc-cCCCceEEEecccCCCCCCHHHHHHHHHcCCeEEEeecccccCCCcc-ccchhHHHHHHHHHHHHHHHHH
Q 012946 79 IKKPKLEMI-LPDRAYAFFSHTHKAQPENMALLDKILAQRVSLFDYELVEGNQGKRR-LIAFGKFAGRAAIIDLLKGLGQ 156 (452)
Q Consensus 79 Vkep~~~~l-~~~~~~~~fs~~~~~q~~n~~ll~~l~~k~it~i~~E~i~~~~g~~~-L~s~~~~AG~~avi~al~~~g~ 156 (452)
||+|..+++ ...+++.+|+|.+... |+++++++.++|+++|+||.+++..+..+ +++++++||+.+++.+.
T Consensus 74 vk~p~~~e~~~l~~~~~l~~~~~~~~--~~~~l~~l~~~gi~~ia~e~v~~~~~~~p~~s~~ae~ag~~a~~~a~----- 146 (377)
T 2vhw_A 74 VKEPIAAEYGRLRHGQILFTFLHLAA--SRACTDALLDSGTTSIAYETVQTADGALPLLAPMSEVAGRLAAQVGA----- 146 (377)
T ss_dssp SSCCCGGGGGGCCTTCEEEECCCGGG--CHHHHHHHHHHTCEEEEGGGCCCTTSCCTTTHHHHHHHHHHHHHHHH-----
T ss_pred eCCCChHHHhhcCCCCEEEEEecccC--CHHHHHHHHHcCCeEEEeeeccccCCCccccCchHHHHHHHHHHHHH-----
Confidence 999998887 5566789999999776 89999999999999999999988655444 79999999999999653
Q ss_pred HHhhcCCCCCcccccccccCccHHHHHHHHHHhhHHHHhcCCCCCCCCceEEEEcCcHHHHHHHHHHhcCCCEE--eCC-
Q 012946 157 RYLNLGYSTPFLTLGAAYMYPSLAAAKAAIISVGEEIATEGLPSGICPLVFVFTGSGHASIAAQELFKLLPHTF--VDP- 233 (452)
Q Consensus 157 ~~l~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~G~~~~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~- 233 (452)
+.+.+.+. |+++...|++ ++++.+|+|+|+|.+|+.+++.|+.+|+.| ++.
T Consensus 147 r~l~~~~~-------------------------g~~~~~~~~~-~l~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~ 200 (377)
T 2vhw_A 147 YHLMRTQG-------------------------GRGVLMGGVP-GVEPADVVVIGAGTAGYNAARIANGMGATVTVLDIN 200 (377)
T ss_dssp HHTSGGGT-------------------------SCCCCTTCBT-TBCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHhcC-------------------------CCcccccCCC-CCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 33332111 1112223443 678999999999999999999999999977 232
Q ss_pred -CChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCCCCCcccccccCcCCcCcchHhhhcCCCcEEEecc
Q 012946 234 -SRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSSRAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCI 312 (452)
Q Consensus 234 -~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a 312 (452)
++++++.+. ++..+.. .. .++ ..+ .+.++.+|+||+|+
T Consensus 201 ~~~l~~~~~~-----------~g~~~~~----~~---------------------~~~----~~l-~~~l~~aDvVi~~~ 239 (377)
T 2vhw_A 201 IDKLRQLDAE-----------FCGRIHT----RY---------------------SSA----YEL-EGAVKRADLVIGAV 239 (377)
T ss_dssp HHHHHHHHHH-----------TTTSSEE----EE---------------------CCH----HHH-HHHHHHCSEEEECC
T ss_pred HHHHHHHHHh-----------cCCeeEe----cc---------------------CCH----HHH-HHHHcCCCEEEECC
Confidence 223333321 2222100 00 000 111 45566899999999
Q ss_pred ccCC-CCCcccCHHHHHHhhcCCCCeEEEEEeeecCCCCeeeecccccCCCCEEEeCCCCCCCCCCCCCCCeEEEeeCCc
Q 012946 313 YWEK-QFPRLLSTQQLRDLAQKGCPLVGISDLTCDMEGSIEILNQTTTIDSPFFRYDPKNDSYHHDMEGDGIICSVVDNL 391 (452)
Q Consensus 313 ~~~~-~~P~Lit~e~l~~mk~gs~~l~vIvDvs~D~gG~iE~~~~~Tt~~~P~~~~~~~~~~~~~~~~~~gV~~~~vdnL 391 (452)
.++. +.|.+|++++++.||+|+ +|||+++|.||+||+ ++|++++.|.+.++ +|++++++|+
T Consensus 240 ~~p~~~t~~li~~~~l~~mk~g~----~iV~va~~~Ggv~e~-~ep~~~~~~~~~~~-------------~v~i~~~phl 301 (377)
T 2vhw_A 240 LVPGAKAPKLVSNSLVAHMKPGA----VLVDIAIDQGGCFEG-SRPTTYDHPTFAVH-------------DTLFYCVANM 301 (377)
T ss_dssp CCTTSCCCCCBCHHHHTTSCTTC----EEEEGGGGTTCSBTT-CCCBCSSSCEEEET-------------TEEEECBTTG
T ss_pred CcCCCCCcceecHHHHhcCCCCc----EEEEEecCCCCcccc-ccCCCCCCCEEEEC-------------CEEEEecCCc
Confidence 9996 899999999999999999 999999999999998 68999999999874 8999999999
Q ss_pred CCcchHHHHHHHHHHHHHHHHHhhcccccc--cCCHHHHhchhhcCCeecCC
Q 012946 392 PTEFPKEASQHFGGLLSQFIGSLASVADIA--KLPGNLRRACIAHGGALTSL 441 (452)
Q Consensus 392 Ps~lp~~AS~~fs~~l~~~l~~l~~~~~~~--~~~~~l~~a~i~~~G~lt~~ 441 (452)
|+.+|++||..|+++++|++..|++.+..+ ..++.|++++++++|++|++
T Consensus 302 ~~~~~~~as~~~~~~~~~~~~~l~~~g~~~~~~~~~~l~~~v~~~~G~i~~~ 353 (377)
T 2vhw_A 302 PASVPKTSTYALTNATMPYVLELADHGWRAACRSNPALAKGLSTHEGALLSE 353 (377)
T ss_dssp GGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHTTEEEETTEECCH
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHhCChhhhhhcChHHhCcEEeeCCEEcCH
Confidence 999999999999999999999998776432 56899999999999999864
No 8
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=100.00 E-value=5.8e-53 Score=437.37 Aligned_cols=355 Identities=21% Similarity=0.243 Sum_probs=273.5
Q ss_pred CcEEEEeeccCCCCCcceecChHHHHHHHHcCCCCCCeeEEEEcCCCC--CCCCchhhhhcCcEEccc--cccccEEEEe
Q 012946 4 NGVVGILAETSNKWERRAPLTPSHCSRLLLAGRQKSGVARILVQPSTK--RIFNDAQYEEAGCEITSD--LSECGLILGI 79 (452)
Q Consensus 4 ~~~IGi~kE~~~~~ErRvaLtP~~v~~L~~~G~~~~~~~~V~VE~gag--~~FsD~eY~~aGa~I~~~--~~~~diIl~V 79 (452)
...|+++||++ +||+||+|||+.|++|++.|| +|+||+++| ++|+|++|++|||+|+++ +++||+||++
T Consensus 7 ~~~~~~~~e~~-~~E~Rv~ltP~~v~~L~~~G~------~V~ve~~ag~~~gf~d~~y~~aGa~i~~~~~~~~adiil~v 79 (401)
T 1x13_A 7 HGRIGIPRERL-TNETRVAATPKTVEQLLKLGF------TVAVESGAGQLASFDDKAFVQAGAEIVEGNSVWQSEIILKV 79 (401)
T ss_dssp -CEEEECCCCS-TTCCCCSCCHHHHHHHHHTTC------EEEEETTTTGGGTCCHHHHHHHTCEEECGGGGGSSSEEECS
T ss_pred CCceeecccCC-CCCeeeCCCHHHHHHHHHCCC------EEEEEECCCcccCCChHHHHHCCCEEeccHHHhcCCeEEEe
Confidence 45899999999 599999999999999999995 999999996 999999999999999987 6679999999
Q ss_pred cCCCcccc-cCCCceEEEecccCCCCCCHHHHHHHHHcCCeEEEeecccccC---CCccccchhHHHHHHHHHHHHHHHH
Q 012946 80 KKPKLEMI-LPDRAYAFFSHTHKAQPENMALLDKILAQRVSLFDYELVEGNQ---GKRRLIAFGKFAGRAAIIDLLKGLG 155 (452)
Q Consensus 80 kep~~~~l-~~~~~~~~fs~~~~~q~~n~~ll~~l~~k~it~i~~E~i~~~~---g~~~L~s~~~~AG~~avi~al~~~g 155 (452)
|+|..+++ ..++++.+|+++|.+. |+.+++++.++||++++||.+++.. ....+++++++|||.++..+.+
T Consensus 80 k~p~~~~i~~l~~~~~li~~~~~~~--d~~~~~al~~~gI~v~~~e~v~~~~~a~~l~~l~~~a~~ag~~av~~~~~--- 154 (401)
T 1x13_A 80 NAPLDDEIALLNPGTTLVSFIWPAQ--NPELMQKLAERNVTVMAMDSVPRISRAQSLDALSSMANIAGYRAIVEAAH--- 154 (401)
T ss_dssp SCCCHHHHTTCCTTCEEEECCCGGG--CHHHHHHHHHTTCEEEEGGGCCCSGGGGGGCHHHHHHHHHHHHHHHHHHH---
T ss_pred CCCCHHHHHHhcCCCcEEEEecCCC--CHHHHHHHHHCCCEEEEeehhhhhhhhcccchHHHHHHHHHHHHHHHHHH---
Confidence 99986666 4566789999999887 8999999999999999999998642 2223689999999999996433
Q ss_pred HHHhhcCCCCCcccccccccCccHHHHHHHHHHhhHHHHhcCCCCCCCCceEEEEcCcHHHHHHHHHHhcCCCEE--eC-
Q 012946 156 QRYLNLGYSTPFLTLGAAYMYPSLAAAKAAIISVGEEIATEGLPSGICPLVFVFTGSGHASIAAQELFKLLPHTF--VD- 232 (452)
Q Consensus 156 ~~~l~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~G~~~~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~- 232 (452)
.+.+. .++..+ .. +++++.+|+|+|+|++|++|+++|+.+|+.| ++
T Consensus 155 --~~~~~--~~~~~~------------------------~~---g~l~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~ 203 (401)
T 1x13_A 155 --EFGRF--FTGQIT------------------------AA---GKVPPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDT 203 (401)
T ss_dssp --HCSSC--SSCEEE------------------------TT---EEECCCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred --hcccc--cCCcee------------------------ec---cCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcC
Confidence 22221 111111 11 1567899999999999999999999999977 33
Q ss_pred -CCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCCCCCcccccccCcCCcCcchHhhhcCCCcEEEec
Q 012946 233 -PSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSSRAFDKNDYYEHPEQYNPIFHEKIAPYASAIINC 311 (452)
Q Consensus 233 -~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~ 311 (452)
+.+++++. +++.. + +.++..++.+ +.++|++.......+.+.+.+ .+.++.+||||+|
T Consensus 204 ~~~~~~~~~------------~lGa~---~--~~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~l-~e~~~~aDvVI~~ 262 (401)
T 1x13_A 204 RPEVKEQVQ------------SMGAE---F--LELDFKEEAG---SGDGYAKVMSDAFIKAEMELF-AAQAKEVDIIVTT 262 (401)
T ss_dssp CGGGHHHHH------------HTTCE---E--CCC-----------CCHHHHHHSHHHHHHHHHHH-HHHHHHCSEEEEC
T ss_pred CHHHHHHHH------------HcCCE---E--EEeccccccc---ccccchhhccHHHHHHHHHHH-HHHhCCCCEEEEC
Confidence 34445543 12432 1 1122222333 234676531100001111223 6677789999999
Q ss_pred cccCC-CCCcccCHHHHHHhhcCCCCeEEEEEeeecCCCCeeeecccccCCCCEEEeCCCCCCCCCCCCCCCeEEEeeCC
Q 012946 312 IYWEK-QFPRLLSTQQLRDLAQKGCPLVGISDLTCDMEGSIEILNQTTTIDSPFFRYDPKNDSYHHDMEGDGIICSVVDN 390 (452)
Q Consensus 312 a~~~~-~~P~Lit~e~l~~mk~gs~~l~vIvDvs~D~gG~iE~~~~~Tt~~~P~~~~~~~~~~~~~~~~~~gV~~~~vdn 390 (452)
++||+ ++|.+|++++++.|++|+ +|||++||.||+|++ |++++|++.. +||+++|++|
T Consensus 263 ~~~pg~~ap~li~~~~l~~mk~g~----vIVdva~~~Gg~v~~----~~~~~p~~~~-------------~gv~i~g~~~ 321 (401)
T 1x13_A 263 ALIPGKPAPKLITREMVDSMKAGS----VIVDLAAQNGGNCEY----TVPGEIFTTE-------------NGVKVIGYTD 321 (401)
T ss_dssp CCCTTSCCCCCBCHHHHHTSCTTC----EEEETTGGGTCSBTT----CCTTSEEECT-------------TSCEEECCSC
T ss_pred CccCCCCCCeeeCHHHHhcCCCCc----EEEEEcCCCCCCcCc----ccCCCceEEE-------------CCEEEEeeCC
Confidence 99985 789999999999999999 999999999999998 4567777664 5999999999
Q ss_pred cCCcchHHHHHHHHHHHHHHHHHhhcc--cccc--cCCHHHHhchhhcCCeecCCCC
Q 012946 391 LPTEFPKEASQHFGGLLSQFIGSLASV--ADIA--KLPGNLRRACIAHGGALTSLYE 443 (452)
Q Consensus 391 LPs~lp~~AS~~fs~~l~~~l~~l~~~--~~~~--~~~~~l~~a~i~~~G~lt~~~~ 443 (452)
+|+.+|++||++|++++++||..+..+ +.+. ..|+++++++++++|+||+++.
T Consensus 322 ~p~~~~~~a~~ll~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 378 (401)
T 1x13_A 322 LPGRLPTQSSQLYGTNLVNLLKLLCKEKDGNITVDFDDVVIRGVTVIRAGEITWPAP 378 (401)
T ss_dssp TGGGSHHHHHHHHHHHHHHHHHHHCCSSSSCCCCCTTSHHHHHHEEEETTEECCSCC
T ss_pred CcccCHHHHHHHHHHhHHHHHHHHhcCccccccccCChHHHhcCeEEeCCEEcCCCC
Confidence 999999999999999999999776433 2353 6688889999999999998764
No 9
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=99.75 E-value=3.5e-17 Score=162.28 Aligned_cols=266 Identities=16% Similarity=0.124 Sum_probs=181.5
Q ss_pred CCCCcEEEEeeccCCCCCcceecChHHHHHHHHcCCCCCCeeEEEEcCCCCCCCCchhhhhcCcEEcccc----ccccEE
Q 012946 1 MLDNGVVGILAETSNKWERRAPLTPSHCSRLLLAGRQKSGVARILVQPSTKRIFNDAQYEEAGCEITSDL----SECGLI 76 (452)
Q Consensus 1 ~~~~~~IGi~kE~~~~~ErRvaLtP~~v~~L~~~G~~~~~~~~V~VE~gag~~FsD~eY~~aGa~I~~~~----~~~diI 76 (452)
|++.|+|.+.-... .....+++|.+.|| +|.+| .|+|++|.++||++.+++ .++|+|
T Consensus 4 ~~~~mki~v~~~~~--------~~~~~~~~L~~~g~------~v~~~-----~~~~~~~~~~g~~~~~~~~~~~~~~d~i 64 (300)
T 2rir_A 4 MLTGLKIAVIGGDA--------RQLEIIRKLTEQQA------DIYLV-----GFDQLDHGFTGAVKCNIDEIPFQQIDSI 64 (300)
T ss_dssp CCCSCEEEEESBCH--------HHHHHHHHHHHTTC------EEEEE-----SCTTSSCCCTTEEECCGGGSCGGGCSEE
T ss_pred cccCCEEEEECCCH--------HHHHHHHHHHhCCC------EEEEE-----eccccccccccceeccchHHHHhcCCEE
Confidence 56778888874321 23466899999994 99998 699999999999998653 479999
Q ss_pred EE----e-----------cCC---Ccccc-cCCCceEEEecccCCCCCCHHHHHHHHHcCCeEEEeecccccCCCccccc
Q 012946 77 LG----I-----------KKP---KLEMI-LPDRAYAFFSHTHKAQPENMALLDKILAQRVSLFDYELVEGNQGKRRLIA 137 (452)
Q Consensus 77 l~----V-----------kep---~~~~l-~~~~~~~~fs~~~~~q~~n~~ll~~l~~k~it~i~~E~i~~~~g~~~L~s 137 (452)
+. + +++ +.+.+ ..++..++++.+ .|.++++.+.++|++++.+....... . ...
T Consensus 65 i~~~~~~~~~~~i~s~~a~~~~~~~~~~l~~~~~l~~i~~g~-----~~~d~~~~~~~~gi~v~~~~~~~~v~--~-~r~ 136 (300)
T 2rir_A 65 ILPVSATTGEGVVSTVFSNEEVVLKQDHLDRTPAHCVIFSGI-----SNAYLENIAAQAKRKLVKLFERDDIA--I-YNS 136 (300)
T ss_dssp ECCSSCEETTTEECBSSCSSCEECCHHHHHTSCTTCEEEESS-----CCHHHHHHHHHTTCCEEEGGGSHHHH--H-HHH
T ss_pred EeccccccCCcccccccccCCccchHHHHhhcCCCCEEEEec-----CCHHHHHHHHHCCCEEEeecCCCceE--E-EcC
Confidence 97 5 343 23333 344455666433 27898999999999999987752100 0 001
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhcCCCCCcccccccccCccHHHHHHHHHHhhHHHHhcCCCCCCCCceEEEEcCcHHHH
Q 012946 138 FGKFAGRAAIIDLLKGLGQRYLNLGYSTPFLTLGAAYMYPSLAAAKAAIISVGEEIATEGLPSGICPLVFVFTGSGHASI 217 (452)
Q Consensus 138 ~~~~AG~~avi~al~~~g~~~l~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~G~~~~i~p~kv~V~G~G~vg~ 217 (452)
++...|. +..+.. ..| ..++..+|+|+|+|++|+
T Consensus 137 ~~~~~g~-------~~~~~~-------------------------------------~~~--~~l~g~~v~IiG~G~iG~ 170 (300)
T 2rir_A 137 IPTVEGT-------IMLAIQ-------------------------------------HTD--YTIHGSQVAVLGLGRTGM 170 (300)
T ss_dssp HHHHHHH-------HHHHHH-------------------------------------TCS--SCSTTSEEEEECCSHHHH
T ss_pred ccHHHHH-------HHHHHH-------------------------------------hcC--CCCCCCEEEEEcccHHHH
Confidence 1111111 111100 011 256789999999999999
Q ss_pred HHHHHHhcCCCEE--eCCCC--hhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCCCCCcccccccCcCCc
Q 012946 218 AAQELFKLLPHTF--VDPSR--LPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSSRAFDKNDYYEHPEQY 293 (452)
Q Consensus 218 gAi~~a~~LGa~v--v~~~~--l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~e~y 293 (452)
.++..++.+|++| .++.. .+++.+ .+.. ++ . +
T Consensus 171 ~~a~~l~~~G~~V~~~d~~~~~~~~~~~------------~g~~---~~----~------------------~------- 206 (300)
T 2rir_A 171 TIARTFAALGANVKVGARSSAHLARITE------------MGLV---PF----H------------------T------- 206 (300)
T ss_dssp HHHHHHHHTTCEEEEEESSHHHHHHHHH------------TTCE---EE----E------------------G-------
T ss_pred HHHHHHHHCCCEEEEEECCHHHHHHHHH------------CCCe---EE----c------------------h-------
Confidence 9999999999977 33321 111211 0110 00 0 0
Q ss_pred CcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEeeecCCCCeeeecccccCCCCEEEeCCCCCC
Q 012946 294 NPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLTCDMEGSIEILNQTTTIDSPFFRYDPKNDS 373 (452)
Q Consensus 294 ~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs~D~gG~iE~~~~~Tt~~~P~~~~~~~~~~ 373 (452)
.. +.+.++.+|+||++.-. .++++++++.||+|+ +|+|++.+.++ +++ .. ..
T Consensus 207 -~~-l~~~l~~aDvVi~~~p~-----~~i~~~~~~~mk~g~----~lin~a~g~~~-~~~-~~--------a~------- 258 (300)
T 2rir_A 207 -DE-LKEHVKDIDICINTIPS-----MILNQTVLSSMTPKT----LILDLASRPGG-TDF-KY--------AE------- 258 (300)
T ss_dssp -GG-HHHHSTTCSEEEECCSS-----CCBCHHHHTTSCTTC----EEEECSSTTCS-BCH-HH--------HH-------
T ss_pred -hh-HHHHhhCCCEEEECCCh-----hhhCHHHHHhCCCCC----EEEEEeCCCCC-cCH-HH--------HH-------
Confidence 11 25678899999999764 588999999999999 99999987655 332 11 11
Q ss_pred CCCCCCCCCeEEEeeCCcCCcc-hHHHHHHHHHHHHHHHHHhhcc
Q 012946 374 YHHDMEGDGIICSVVDNLPTEF-PKEASQHFGGLLSQFIGSLASV 417 (452)
Q Consensus 374 ~~~~~~~~gV~~~~vdnLPs~l-p~~AS~~fs~~l~~~l~~l~~~ 417 (452)
..|+.+++++|+|..+ |.+|+.++++++.|||..|+++
T Consensus 259 ------~~G~~~i~~pg~~g~v~~a~a~~l~~~~~~~~l~~~~~~ 297 (300)
T 2rir_A 259 ------KQGIKALLAPGLPGIVAPKTAGQILANVLSKLLAEIQAE 297 (300)
T ss_dssp ------HHTCEEEECCCHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ------HCCCEEEECCCCCCcHHHHHHHHHHHHHHHHHHHHhccc
Confidence 2389999999999999 9999999999999999998754
No 10
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=99.64 E-value=1.2e-14 Score=143.74 Aligned_cols=261 Identities=17% Similarity=0.128 Sum_probs=170.6
Q ss_pred CCCCcEEEEeeccCCCCCcceecChHHHHHHHHcCCCCCCeeEEEEcCCCCCCCCchhhhhcCcEEcccc----ccccEE
Q 012946 1 MLDNGVVGILAETSNKWERRAPLTPSHCSRLLLAGRQKSGVARILVQPSTKRIFNDAQYEEAGCEITSDL----SECGLI 76 (452)
Q Consensus 1 ~~~~~~IGi~kE~~~~~ErRvaLtP~~v~~L~~~G~~~~~~~~V~VE~gag~~FsD~eY~~aGa~I~~~~----~~~diI 76 (452)
|+.+|+|.+.-... | ....+++|.+.| ++|.++ .|+|++|.++|+...+++ .++|+|
T Consensus 2 ~~~~m~i~v~~~~~-----~---~~~~~~~L~~~g------~~v~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~d~i 62 (293)
T 3d4o_A 2 MLTGKHVVIIGGDA-----R---QLEIIRKLSTFD------AKISLV-----GFDQLDDGFIGVTKMRIDEVDWNTVDAI 62 (293)
T ss_dssp CCTTCEEEEECBCH-----H---HHHHHHHHHHTT------CEEEEE-----SCTTCC--CTTCEEECGGGCCGGGCSEE
T ss_pred CccCcEEEEECCCH-----H---HHHHHHHHHhCC------CEEEEe-----ccccccccccccccccchHHHHhcCCEE
Confidence 56788888874322 2 245678899999 499887 689999999999987653 479999
Q ss_pred EEe----c-----------CC---Ccccc-cCCCceEEEecccCCCCCCHHHHHHHHHcCCeEEEeecccccCCCccccc
Q 012946 77 LGI----K-----------KP---KLEMI-LPDRAYAFFSHTHKAQPENMALLDKILAQRVSLFDYELVEGNQGKRRLIA 137 (452)
Q Consensus 77 l~V----k-----------ep---~~~~l-~~~~~~~~fs~~~~~q~~n~~ll~~l~~k~it~i~~E~i~~~~g~~~L~s 137 (452)
+.- + ++ +.+.+ ..++..++++.+ .|.++.+.+.++||+++.....+
T Consensus 63 i~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~l~~i~~G~-----d~id~~~~~~~~gi~v~~~~~~~---------- 127 (293)
T 3d4o_A 63 LLPISGTNEAGKVDTIFSNESIVLTEEMIEKTPNHCVVYSGI-----SNTYLNQCMKKTNRTLVKLMERD---------- 127 (293)
T ss_dssp ECCTTCCCTTCBCCBSSCSCCCBCCHHHHHTSCTTCEEEESS-----CCHHHHHHHHHHTCEEEEGGGCH----------
T ss_pred EeccccccCCceeecccccCCccchHHHHHhCCCCCEEEecC-----CCHHHHHHHHHcCCeEEEecCCc----------
Confidence 862 2 22 23333 333344555322 26777789999999998876521
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhcCCCCCcccccccccCccHHHHHHHHHHhhHHHHhcCCCCCCCCceEEEEcCcHHHH
Q 012946 138 FGKFAGRAAIIDLLKGLGQRYLNLGYSTPFLTLGAAYMYPSLAAAKAAIISVGEEIATEGLPSGICPLVFVFTGSGHASI 217 (452)
Q Consensus 138 ~~~~AG~~avi~al~~~g~~~l~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~G~~~~i~p~kv~V~G~G~vg~ 217 (452)
+..|+.+.-.|=..++.- +. ..| ..+...+|+|+|+|++|+
T Consensus 128 --~~~~~~~~svae~a~~~~-l~----------------------------------~~~--~~l~g~~v~IiG~G~iG~ 168 (293)
T 3d4o_A 128 --DIAIYNSIPTAEGTIMMA-IQ----------------------------------HTD--FTIHGANVAVLGLGRVGM 168 (293)
T ss_dssp --HHHHHHHHHHHHHHHHHH-HH----------------------------------HCS--SCSTTCEEEEECCSHHHH
T ss_pred --eeeeeccHhHHHHHHHHH-HH----------------------------------hcC--CCCCCCEEEEEeeCHHHH
Confidence 122222111111111110 00 011 255678999999999999
Q ss_pred HHHHHHhcCCCEE--eCCCC--hhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCCCCCcccccccCcCCc
Q 012946 218 AAQELFKLLPHTF--VDPSR--LPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSSRAFDKNDYYEHPEQY 293 (452)
Q Consensus 218 gAi~~a~~LGa~v--v~~~~--l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~e~y 293 (452)
.++..++.+|++| .++.. .++..+ .+.. + +. .
T Consensus 169 ~~a~~l~~~G~~V~~~dr~~~~~~~~~~------------~g~~---~----~~----------------------~--- 204 (293)
T 3d4o_A 169 SVARKFAALGAKVKVGARESDLLARIAE------------MGME---P----FH----------------------I--- 204 (293)
T ss_dssp HHHHHHHHTTCEEEEEESSHHHHHHHHH------------TTSE---E----EE----------------------G---
T ss_pred HHHHHHHhCCCEEEEEECCHHHHHHHHH------------CCCe---e----cC----------------------h---
Confidence 9999999999977 33321 111210 1111 0 00 0
Q ss_pred CcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEeeecCCCCeeeecccccCCCCEEEeCCCCCC
Q 012946 294 NPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLTCDMEGSIEILNQTTTIDSPFFRYDPKNDS 373 (452)
Q Consensus 294 ~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs~D~gG~iE~~~~~Tt~~~P~~~~~~~~~~ 373 (452)
.. +.+.++.+|+||+++- +.+++++.++.||+|. +++|++...++ +++ .. ..
T Consensus 205 -~~-l~~~l~~aDvVi~~~p-----~~~i~~~~l~~mk~~~----~lin~ar~~~~-~~~-~~--------a~------- 256 (293)
T 3d4o_A 205 -SK-AAQELRDVDVCINTIP-----ALVVTANVLAEMPSHT----FVIDLASKPGG-TDF-RY--------AE------- 256 (293)
T ss_dssp -GG-HHHHTTTCSEEEECCS-----SCCBCHHHHHHSCTTC----EEEECSSTTCS-BCH-HH--------HH-------
T ss_pred -hh-HHHHhcCCCEEEECCC-----hHHhCHHHHHhcCCCC----EEEEecCCCCC-CCH-HH--------HH-------
Confidence 01 1556788999999973 3688999999999999 99999975544 333 11 11
Q ss_pred CCCCCCCCCeEEEeeCCcCCcc-hHHHHHHHHHHHHHHHH
Q 012946 374 YHHDMEGDGIICSVVDNLPTEF-PKEASQHFGGLLSQFIG 412 (452)
Q Consensus 374 ~~~~~~~~gV~~~~vdnLPs~l-p~~AS~~fs~~l~~~l~ 412 (452)
..|+.+++++|+|+.+ |++||+.|++++.+||.
T Consensus 257 ------~~Gv~~~~~~~l~~~v~p~~a~~~~~~~~~~~l~ 290 (293)
T 3d4o_A 257 ------KRGIKALLVPGLPGIVAPKTAGRILADVLVKLLA 290 (293)
T ss_dssp ------HHTCEEEECCCHHHHHCHHHHHHHHHHHHHHHHT
T ss_pred ------HCCCEEEECCCCCcccCHHHHHHHHHHHHHHHhc
Confidence 2389999999999999 99999999999999984
No 11
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=99.30 E-value=9.5e-13 Score=135.00 Aligned_cols=217 Identities=13% Similarity=0.110 Sum_probs=133.9
Q ss_pred ChHHHHHHHHcCCCCCCeeEEEEcCCCC--CCCCchhhhhcCcEEccc---ccc-------ccEEEEecCCCcccc--cC
Q 012946 24 TPSHCSRLLLAGRQKSGVARILVQPSTK--RIFNDAQYEEAGCEITSD---LSE-------CGLILGIKKPKLEMI--LP 89 (452)
Q Consensus 24 tP~~v~~L~~~G~~~~~~~~V~VE~gag--~~FsD~eY~~aGa~I~~~---~~~-------~diIl~Vkep~~~~l--~~ 89 (452)
+|+.+..++..|+ +|.|+++.+ .+|.|..|. ||+.|.+. ++. .+|+|++++ .+++ ..
T Consensus 54 ~p~~v~~~t~~~~------~V~VvTdG~~iLGLGD~G~~-aG~pI~eGK~~Lf~~~agid~~pi~Ldv~~--~dEfv~~v 124 (398)
T 2a9f_A 54 DKTLAYDLTTKKN------TVAVISDGTAVLGLGDIGPE-AAMPVMEGKAALFKAFAGVDAIPIVLDTKD--TEEIISIV 124 (398)
T ss_dssp CGGGHHHHSGGGT------EEEEEECSSSCTTSCCCCHH-HHHHHHHHHHHHHHHHSSCEEEEEECCCCC--HHHHHHHH
T ss_pred CHHHHHHhcccCC------EEEEEECCccccCCCCcccc-cCCcchhCHHHHHHhccCCceeeeEeCCCC--HHHHHHHH
Confidence 7899999999995 999999995 899999999 79999753 443 699999986 3332 11
Q ss_pred CCceEEEecccCCCCCCH---HHHHHHHHcCCeEEEeecccccCCCccccchhHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 012946 90 DRAYAFFSHTHKAQPENM---ALLDKILAQRVSLFDYELVEGNQGKRRLIAFGKFAGRAAIIDLLKGLGQRYLNLGYSTP 166 (452)
Q Consensus 90 ~~~~~~fs~~~~~q~~n~---~ll~~l~~k~it~i~~E~i~~~~g~~~L~s~~~~AG~~avi~al~~~g~~~l~~~~~~P 166 (452)
++.+-.|+.+|..--.++ ++++++.+. +.-|+ -...++|.+++. ++..+..
T Consensus 125 ~~~~p~F~~I~lED~~~p~~f~il~~~r~~--------------~~ipv-f~DDiqGTa~V~-----lAall~a------ 178 (398)
T 2a9f_A 125 KALAPTFGGINLEDISAPRCFEIEQRLIKE--------------CHIPV-FHDDQHGTAIVV-----LAAIFNS------ 178 (398)
T ss_dssp HHHGGGCSEEEECSCCTTHHHHHHHHHHHH--------------CSSCE-EEHHHHHHHHHH-----HHHHHHH------
T ss_pred HHcCCceeEeccccCCChHHHHHHHHhhhc--------------CCcce-ecchhhhHHHHH-----HHHHHHH------
Confidence 111122333333222233 333333332 11111 125889999988 3443211
Q ss_pred cccccccccCccHHHHHHHHHHhhHHHHhcCCCCCCCCceEEEEcCcHHHHHHHHHHhcCCC-EE--eCCCChhhHHhhh
Q 012946 167 FLTLGAAYMYPSLAAAKAAIISVGEEIATEGLPSGICPLVFVFTGSGHASIAAQELFKLLPH-TF--VDPSRLPELFEKA 243 (452)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~G~~~~i~p~kv~V~G~G~vg~gAi~~a~~LGa-~v--v~~~~l~~~~e~~ 243 (452)
++ ..| .++.+.||||+|+|.||.++++++..+|+ .+ ++.+=+ +.
T Consensus 179 -------------------l~-------l~g--~~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~Gl--i~--- 225 (398)
T 2a9f_A 179 -------------------LK-------LLK--KSLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFGI--IN--- 225 (398)
T ss_dssp -------------------HH-------TTT--CCTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEE--CC---
T ss_pred -------------------HH-------HhC--CCCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCCc--cc---
Confidence 11 233 37889999999999999999999999998 43 221100 00
Q ss_pred CCCCCccccCCCCceeEEEeeeeec-ccccccCCCCCCCcccc-cccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcc
Q 012946 244 GDSSQSTCSSSTKRVFQVYGCVVTS-ENMVEPKDSSRAFDKND-YYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRL 321 (452)
Q Consensus 244 ~~~~~~~~~~~~~~~~~v~~~~~~~-~d~~~~~~~~~~~~~~~-~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~L 321 (452)
-.+ .++.. -...|++.. ...+. .. +.+.++.+||+|.+. +|.+
T Consensus 226 ----------------------~~R~~~L~~---~k~~fa~~~~~~~~~----~~-L~eav~~ADV~IG~S-----apgl 270 (398)
T 2a9f_A 226 ----------------------EQEAAQLAP---HHLDIAKVTNREFKS----GT-LEDALEGADIFIGVS-----APGV 270 (398)
T ss_dssp ----------------------TTCCCSCCC------CHHHHHSCTTCC----CS-CSHHHHTTCSEEECC-----STTC
T ss_pred ----------------------CCccccchH---HHHHHhhccCcccch----hh-HHHHhccCCEEEecC-----CCCC
Confidence 000 00000 011233210 00111 11 267788899999983 5999
Q ss_pred cCHHHHHHhhcCCCCeEEEEEeeecC
Q 012946 322 LSTQQLRDLAQKGCPLVGISDLTCDM 347 (452)
Q Consensus 322 it~e~l~~mk~gs~~l~vIvDvs~D~ 347 (452)
||+|||++|++++ +|+|+|--.
T Consensus 271 ~T~EmVk~Ma~~p----IIfalsNPt 292 (398)
T 2a9f_A 271 LKAEWISKMAARP----VIFAMANPI 292 (398)
T ss_dssp CCHHHHHTSCSSC----EEEECCSSS
T ss_pred CCHHHHHhhCCCC----EEEECCCCC
Confidence 9999999999999 999999654
No 12
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=99.19 E-value=8.3e-12 Score=127.84 Aligned_cols=210 Identities=14% Similarity=0.081 Sum_probs=129.4
Q ss_pred ChHHHHHHHHcCCCCCCeeEEEEcCCCC--CCCCchhhhhcCcEEccc---ccc-------ccEEEEecCCCcccc--cC
Q 012946 24 TPSHCSRLLLAGRQKSGVARILVQPSTK--RIFNDAQYEEAGCEITSD---LSE-------CGLILGIKKPKLEMI--LP 89 (452)
Q Consensus 24 tP~~v~~L~~~G~~~~~~~~V~VE~gag--~~FsD~eY~~aGa~I~~~---~~~-------~diIl~Vkep~~~~l--~~ 89 (452)
+|+.+..++..| .+|.|+++.+ .+|.|..|. +|+.|.+. ++. .+|+|+++. .+++ ..
T Consensus 58 ~p~~v~~~t~~~------~~V~VvTdg~~vLGlGD~G~~-ag~pI~egK~~Lf~~~agid~~pi~ldv~~--~dE~v~~v 128 (388)
T 1vl6_A 58 DPEKTYVYTSRW------NTVAVVSDGSAVLGLGNIGPY-GALPVMEGKAFLFKAFADIDAFPICLSESE--EEKIISIV 128 (388)
T ss_dssp CGGGHHHHSGGG------GEEEEEECSTTBTTTBSCCHH-HHHHHHHHHHHHHHHHHCCEEEEEECSCCC--HHHHHHHH
T ss_pred CHHHHHhhcccC------CeEEEEECCccccCCCccccc-cCCcchhCHHHHHHhccCCceEeEEeCCCC--HHHHHHHH
Confidence 789999999999 4999999995 899999999 79999753 343 588888885 3332 11
Q ss_pred CCceEEEecccCCCCCCH---HHHHHHHHcCCeEEEeecccccCCCccccchhHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 012946 90 DRAYAFFSHTHKAQPENM---ALLDKILAQRVSLFDYELVEGNQGKRRLIAFGKFAGRAAIIDLLKGLGQRYLNLGYSTP 166 (452)
Q Consensus 90 ~~~~~~fs~~~~~q~~n~---~ll~~l~~k~it~i~~E~i~~~~g~~~L~s~~~~AG~~avi~al~~~g~~~l~~~~~~P 166 (452)
++.+-.|+.+|..--.++ ++++++.+. ..-++ -...+.|.+++..|--..+.+
T Consensus 129 k~~~p~f~~i~lED~~~p~af~il~r~r~~--------------~~Ipv-f~DDiqGTasV~lAal~~A~~--------- 184 (388)
T 1vl6_A 129 KSLEPSFGGINLEDIGAPKCFRILQRLSEE--------------MNIPV-FHDDQQGTAVVVSAAFLNALK--------- 184 (388)
T ss_dssp HHTGGGCSEEEECSCCTTHHHHHHHHHHHH--------------CSSCE-EEHHHHHHHHHHHHHHHHHHH---------
T ss_pred HHcCCcceEeCHhhcCCHHHHHHHHHhhhh--------------cCcce-eccccccHHHHHHHHHHHHHH---------
Confidence 111111333332221122 333333332 01111 115778888887322222221
Q ss_pred cccccccccCccHHHHHHHHHHhhHHHHhcCCCCCCCCceEEEEcCcHHHHHHHHHHhcCCC-EE--eCCC------C--
Q 012946 167 FLTLGAAYMYPSLAAAKAAIISVGEEIATEGLPSGICPLVFVFTGSGHASIAAQELFKLLPH-TF--VDPS------R-- 235 (452)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~G~~~~i~p~kv~V~G~G~vg~gAi~~a~~LGa-~v--v~~~------~-- 235 (452)
..| .++.+.+|+|+|+|.+|.++++.+..+|+ .+ ++.. +
T Consensus 185 ----------------------------i~g--~~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~ 234 (388)
T 1vl6_A 185 ----------------------------LTE--KKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPE 234 (388)
T ss_dssp ----------------------------HHT--CCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGG
T ss_pred ----------------------------HhC--CCCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcc
Confidence 122 26789999999999999999999999998 33 2221 0
Q ss_pred --hhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCCCCCcccccccCcCCcCcchHhhhcCCCcEEEeccc
Q 012946 236 --LPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSSRAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIY 313 (452)
Q Consensus 236 --l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~ 313 (452)
++... ..|+++. ++..-... +.+.++.+||+|++.
T Consensus 235 ~~L~~~k--------------------------------------~~~A~~~---~~~~~~~~-L~eav~~ADVlIG~S- 271 (388)
T 1vl6_A 235 TCLNEYH--------------------------------------LEIARIT---NPERLSGD-LETALEGADFFIGVS- 271 (388)
T ss_dssp GCSSHHH--------------------------------------HHHHHTS---CTTCCCSC-HHHHHTTCSEEEECS-
T ss_pred cccCHHH--------------------------------------HHHHHhh---hccCchhh-HHHHHccCCEEEEeC-
Confidence 11111 0111110 00000012 378889999999993
Q ss_pred cCCCCCcccCHHHHHHhhcCCCCeEEEEEeeecC
Q 012946 314 WEKQFPRLLSTQQLRDLAQKGCPLVGISDLTCDM 347 (452)
Q Consensus 314 ~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs~D~ 347 (452)
+|.+||+||+++|++++ +|+|+|--.
T Consensus 272 ----ap~l~t~emVk~Ma~~p----IIfalSNPt 297 (388)
T 1vl6_A 272 ----RGNILKPEWIKKMSRKP----VIFALANPV 297 (388)
T ss_dssp ----CSSCSCHHHHTTSCSSC----EEEECCSSS
T ss_pred ----CCCccCHHHHHhcCCCC----EEEEcCCCC
Confidence 37999999999999998 999988543
No 13
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=98.11 E-value=1.3e-06 Score=91.99 Aligned_cols=165 Identities=12% Similarity=0.131 Sum_probs=103.8
Q ss_pred eEEEecccCCCCCCHHHHHHHHHcCCeEEEeecccccC--------CCccccchhHHHHHHHHHHHHHHHHHHHhhcCCC
Q 012946 93 YAFFSHTHKAQPENMALLDKILAQRVSLFDYELVEGNQ--------GKRRLIAFGKFAGRAAIIDLLKGLGQRYLNLGYS 164 (452)
Q Consensus 93 ~~~fs~~~~~q~~n~~ll~~l~~k~it~i~~E~i~~~~--------g~~~L~s~~~~AG~~avi~al~~~g~~~l~~~~~ 164 (452)
+++|.++|+.-..++++...++ .+++.|++|.-..-+ |-. +....+.++ ++.+.+ .
T Consensus 170 ~~~~~~l~~~la~~~~~~~~l~-~~l~gi~eet~~Gvd~l~a~~~~Gil-v~p~~~vn~--sVae~l---~--------- 233 (479)
T 1v8b_A 170 RCFLTLLKNSILKNPKKWTNIA-KKIIGVSEETTTGVLRLKKMDKQNEL-LFTAINVND--AVTKQK---Y--------- 233 (479)
T ss_dssp HHHHHHHHHHHTTCTTHHHHHH-TTCCEEEECSHHHHHHHHHHHHTTCC-CSEEEECTT--SHHHHT---T---------
T ss_pred HHHHHHHHHhhhcChhhHHHHh-cCeEEEEEeeCccHhHHHHHHHcCCE-EeccCCccH--HHHHHH---H---------
Confidence 7899999933333788999998 889999988765321 222 333333333 333311 0
Q ss_pred CCcccccccccCccHHHHHHHHHHhhHHHH-hcCCCCCCCCceEEEEcCcHHHHHHHHHHhcCCCEE--eCCCChhhHHh
Q 012946 165 TPFLTLGAAYMYPSLAAAKAAIISVGEEIA-TEGLPSGICPLVFVFTGSGHASIAAQELFKLLPHTF--VDPSRLPELFE 241 (452)
Q Consensus 165 ~P~~~~~~~~~~~~~~~~~~~~~~~g~~i~-~~G~~~~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~~~l~~~~e 241 (452)
++.-...+.+.+ | +. ..| ..+...+|+|+|.|++|.+.+..++.+|+.| .++...+....
T Consensus 234 ------------r~~~~~~~~l~~-g--w~r~~~--~~l~GktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a 296 (479)
T 1v8b_A 234 ------------DNVYGCRHSLPD-G--LMRATD--FLISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQA 296 (479)
T ss_dssp ------------HHHHHHHHHHHH-H--HHHHHC--CCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHH
T ss_pred ------------hchHhHHHHHhh-h--hhhccc--cccCCCEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHH
Confidence 001111111111 1 21 122 2667899999999999999999999999987 34432222110
Q ss_pred hhCCCCCccccCCCCceeEEEeeeeecccccccCCCCCCCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcc
Q 012946 242 KAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSSRAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRL 321 (452)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~L 321 (452)
. .. +|. + .. +.+.++.+|+||++. ..+.+
T Consensus 297 ~----------~~-------------------------g~~---~--------~~-l~ell~~aDiVi~~~----~t~~l 325 (479)
T 1v8b_A 297 V----------ME-------------------------GFN---V--------VT-LDEIVDKGDFFITCT----GNVDV 325 (479)
T ss_dssp H----------TT-------------------------TCE---E--------CC-HHHHTTTCSEEEECC----SSSSS
T ss_pred H----------Hc-------------------------CCE---e--------cC-HHHHHhcCCEEEECC----Chhhh
Confidence 0 00 110 0 01 266788999999994 67889
Q ss_pred cCHHHHHHhhcCCCCeEEEEEeee
Q 012946 322 LSTQQLRDLAQKGCPLVGISDLTC 345 (452)
Q Consensus 322 it~e~l~~mk~gs~~l~vIvDvs~ 345 (452)
|++++++.||+|+ +|+|++-
T Consensus 326 I~~~~l~~MK~ga----iliNvgr 345 (479)
T 1v8b_A 326 IKLEHLLKMKNNA----VVGNIGH 345 (479)
T ss_dssp BCHHHHTTCCTTC----EEEECSS
T ss_pred cCHHHHhhcCCCc----EEEEeCC
Confidence 9999999999999 9999983
No 14
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=98.09 E-value=4.8e-06 Score=82.61 Aligned_cols=78 Identities=12% Similarity=0.134 Sum_probs=61.8
Q ss_pred CCCCceEEEEcCcH-HHHHHHHHHhcCCCEEeCCCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCCC
Q 012946 201 GICPLVFVFTGSGH-ASIAAQELFKLLPHTFVDPSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSSR 279 (452)
Q Consensus 201 ~i~p~kv~V~G~G~-vg~gAi~~a~~LGa~vv~~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~~ 279 (452)
.+.+.+|+|+|+|+ ||+-+...+.++||.|. + | .+
T Consensus 162 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVt-----------------------------v--~--hs----------- 197 (301)
T 1a4i_A 162 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVT-----------------------------T--C--HS----------- 197 (301)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEE-----------------------------E--E--CT-----------
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHhCCCeEE-----------------------------E--E--EC-----------
Confidence 67899999999995 89999999999987761 1 1 00
Q ss_pred CCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEeeecC
Q 012946 280 AFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLTCDM 347 (452)
Q Consensus 280 ~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs~D~ 347 (452)
+..+ +.++++.+||||+++.. |.+|+.+|+ |+|+ ||||++.+.
T Consensus 198 ---------~t~~-----L~~~~~~ADIVI~Avg~----p~~I~~~~v---k~Ga----vVIDVgi~~ 240 (301)
T 1a4i_A 198 ---------KTAH-----LDEEVNKGDILVVATGQ----PEMVKGEWI---KPGA----IVIDCGINY 240 (301)
T ss_dssp ---------TCSS-----HHHHHTTCSEEEECCCC----TTCBCGGGS---CTTC----EEEECCCBC
T ss_pred ---------Cccc-----HHHHhccCCEEEECCCC----cccCCHHHc---CCCc----EEEEccCCC
Confidence 0001 26788999999999876 558999997 7999 999999985
No 15
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=97.97 E-value=4.9e-05 Score=80.38 Aligned_cols=90 Identities=13% Similarity=0.137 Sum_probs=67.4
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEE--eCCCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCC
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTF--VDPSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSS 278 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~ 278 (452)
.+...+|+|+|.|++|++.+..|+.+|+.| .++...+..... ..+.. +
T Consensus 274 ~L~GktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~----------~~G~~--------~------------ 323 (494)
T 3d64_A 274 MIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAA----------MEGYR--------V------------ 323 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHH----------TTTCE--------E------------
T ss_pred ccCCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHH----------HcCCE--------e------------
Confidence 577899999999999999999999999987 343322221100 00100 0
Q ss_pred CCCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEeee
Q 012946 279 RAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLTC 345 (452)
Q Consensus 279 ~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs~ 345 (452)
.. +.+.++.+||||++. ..+.+|++++++.||+|+ +|||++-
T Consensus 324 ----------------~~-l~ell~~aDiVi~~~----~t~~lI~~~~l~~MK~gA----ilINvgr 365 (494)
T 3d64_A 324 ----------------VT-MEYAADKADIFVTAT----GNYHVINHDHMKAMRHNA----IVCNIGH 365 (494)
T ss_dssp ----------------CC-HHHHTTTCSEEEECS----SSSCSBCHHHHHHCCTTE----EEEECSS
T ss_pred ----------------CC-HHHHHhcCCEEEECC----CcccccCHHHHhhCCCCc----EEEEcCC
Confidence 01 266788999999997 577899999999999999 9999984
No 16
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=97.95 E-value=1.3e-05 Score=79.09 Aligned_cols=78 Identities=13% Similarity=0.160 Sum_probs=61.1
Q ss_pred CCCCceEEEEcCcH-HHHHHHHHHhcCCCEEeCCCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCCC
Q 012946 201 GICPLVFVFTGSGH-ASIAAQELFKLLPHTFVDPSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSSR 279 (452)
Q Consensus 201 ~i~p~kv~V~G~G~-vg~gAi~~a~~LGa~vv~~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~~ 279 (452)
.+.-.+++|+|.|. ||+.+...|.+.||+|. + | .+
T Consensus 158 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVt-----------------------------v--~--hs----------- 193 (285)
T 3l07_A 158 KTEGAYAVVVGASNVVGKPVSQLLLNAKATVT-----------------------------T--C--HR----------- 193 (285)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEE-----------------------------E--E--CT-----------
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCCeEE-----------------------------E--E--eC-----------
Confidence 56779999999876 89999999999988751 0 0 00
Q ss_pred CCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEeeecC
Q 012946 280 AFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLTCDM 347 (452)
Q Consensus 280 ~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs~D~ 347 (452)
.. .. ++++++.+||||+++- .|.+|+.+|+ |+|+ ||||++.+.
T Consensus 194 -~t------------~~-L~~~~~~ADIVI~Avg----~p~~I~~~~v---k~Ga----vVIDvgi~~ 236 (285)
T 3l07_A 194 -FT------------TD-LKSHTTKADILIVAVG----KPNFITADMV---KEGA----VVIDVGINH 236 (285)
T ss_dssp -TC------------SS-HHHHHTTCSEEEECCC----CTTCBCGGGS---CTTC----EEEECCCEE
T ss_pred -Cc------------hh-HHHhcccCCEEEECCC----CCCCCCHHHc---CCCc----EEEEecccC
Confidence 00 00 2667899999999983 6889999987 9999 999999887
No 17
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=97.95 E-value=7.6e-06 Score=80.72 Aligned_cols=78 Identities=13% Similarity=0.072 Sum_probs=61.8
Q ss_pred CCCCceEEEEcCcH-HHHHHHHHHhcCCCEEeCCCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCCC
Q 012946 201 GICPLVFVFTGSGH-ASIAAQELFKLLPHTFVDPSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSSR 279 (452)
Q Consensus 201 ~i~p~kv~V~G~G~-vg~gAi~~a~~LGa~vv~~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~~ 279 (452)
++.+.+|+|+|.|+ ||+-+...+.+.||.|. + |. +
T Consensus 156 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVt-----------------------------v--~h--s----------- 191 (288)
T 1b0a_A 156 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTT-----------------------------V--TH--R----------- 191 (288)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEE-----------------------------E--EC--S-----------
T ss_pred CCCCCEEEEECCChHHHHHHHHHHHHCCCeEE-----------------------------E--Ee--C-----------
Confidence 67899999999995 89999999999987761 0 10 0
Q ss_pred CCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEeeecC
Q 012946 280 AFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLTCDM 347 (452)
Q Consensus 280 ~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs~D~ 347 (452)
+.++ +.++++.+||||+++. .|.||+.+|+ |+|+ ||||++.+.
T Consensus 192 ---------~t~~-----L~~~~~~ADIVI~Avg----~p~lI~~~~v---k~Ga----vVIDVgi~r 234 (288)
T 1b0a_A 192 ---------FTKN-----LRHHVENADLLIVAVG----KPGFIPGDWI---KEGA----IVIDVGINR 234 (288)
T ss_dssp ---------SCSC-----HHHHHHHCSEEEECSC----CTTCBCTTTS---CTTC----EEEECCCEE
T ss_pred ---------Cchh-----HHHHhccCCEEEECCC----CcCcCCHHHc---CCCc----EEEEccCCc
Confidence 0001 2667889999999987 5668999997 8999 999999986
No 18
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=97.88 E-value=1.7e-05 Score=78.21 Aligned_cols=78 Identities=14% Similarity=0.058 Sum_probs=61.0
Q ss_pred CCCCceEEEEcCcH-HHHHHHHHHhcCCCEEeCCCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCCC
Q 012946 201 GICPLVFVFTGSGH-ASIAAQELFKLLPHTFVDPSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSSR 279 (452)
Q Consensus 201 ~i~p~kv~V~G~G~-vg~gAi~~a~~LGa~vv~~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~~ 279 (452)
.+.-.+++|+|.|. ||+.+...|.+.||.|. + | .+
T Consensus 157 ~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVt-----------------------------v--~--h~----------- 192 (285)
T 3p2o_A 157 DLEGKDAVIIGASNIVGRPMATMLLNAGATVS-----------------------------V--C--HI----------- 192 (285)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEE-----------------------------E--E--CT-----------
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEE-----------------------------E--E--eC-----------
Confidence 56779999999876 89999999999988761 0 0 00
Q ss_pred CCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEeeecC
Q 012946 280 AFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLTCDM 347 (452)
Q Consensus 280 ~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs~D~ 347 (452)
+. .. ++++++.+||||+++- .|.+|+.+|+ |+|+ +|||++.+.
T Consensus 193 ---------~t----~~-L~~~~~~ADIVI~Avg----~p~~I~~~~v---k~Ga----vVIDVgi~~ 235 (285)
T 3p2o_A 193 ---------KT----KD-LSLYTRQADLIIVAAG----CVNLLRSDMV---KEGV----IVVDVGINR 235 (285)
T ss_dssp ---------TC----SC-HHHHHTTCSEEEECSS----CTTCBCGGGS---CTTE----EEEECCCEE
T ss_pred ---------Cc----hh-HHHHhhcCCEEEECCC----CCCcCCHHHc---CCCe----EEEEeccCc
Confidence 00 00 2667889999999984 6888999987 8999 999999886
No 19
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=97.87 E-value=1.8e-05 Score=77.93 Aligned_cols=78 Identities=13% Similarity=0.108 Sum_probs=60.6
Q ss_pred CCCCceEEEEcCcH-HHHHHHHHHhcCCCEEeCCCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCCC
Q 012946 201 GICPLVFVFTGSGH-ASIAAQELFKLLPHTFVDPSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSSR 279 (452)
Q Consensus 201 ~i~p~kv~V~G~G~-vg~gAi~~a~~LGa~vv~~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~~ 279 (452)
.+.-.+++|+|.|. ||+.+...|.++||.|. + | .+
T Consensus 158 ~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVt-----------------------------v--~--hs----------- 193 (286)
T 4a5o_A 158 DLYGMDAVVVGASNIVGRPMALELLLGGCTVT-----------------------------V--T--HR----------- 193 (286)
T ss_dssp CCTTCEEEEECTTSTTHHHHHHHHHHTTCEEE-----------------------------E--E--CT-----------
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCCeEE-----------------------------E--E--eC-----------
Confidence 55678999999865 99999999999988761 0 0 00
Q ss_pred CCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEeeecC
Q 012946 280 AFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLTCDM 347 (452)
Q Consensus 280 ~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs~D~ 347 (452)
+. .+ ++++++.+||||+++ ..|.+|+.+|+ |+|+ ||||++.+.
T Consensus 194 -~T--------~~-----L~~~~~~ADIVI~Av----g~p~~I~~~~v---k~Ga----vVIDvgi~~ 236 (286)
T 4a5o_A 194 -FT--------RD-----LADHVSRADLVVVAA----GKPGLVKGEWI---KEGA----IVIDVGINR 236 (286)
T ss_dssp -TC--------SC-----HHHHHHTCSEEEECC----CCTTCBCGGGS---CTTC----EEEECCSCS
T ss_pred -CC--------cC-----HHHHhccCCEEEECC----CCCCCCCHHHc---CCCe----EEEEecccc
Confidence 00 00 256788999999998 36889999988 9999 999999986
No 20
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=97.76 E-value=5.8e-05 Score=78.36 Aligned_cols=89 Identities=10% Similarity=0.120 Sum_probs=64.6
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEE--eCCCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCC
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTF--VDPSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSS 278 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~ 278 (452)
.+.-.+|+|+|.|.+|++.+..|+.+|+.| ++....+..... ..+
T Consensus 217 ~L~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~----------~~G----------------------- 263 (435)
T 3gvp_A 217 MFGGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQAC----------MDG----------------------- 263 (435)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH----------HTT-----------------------
T ss_pred eecCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHH----------HcC-----------------------
Confidence 456689999999999999999999999987 333222222100 001
Q ss_pred CCCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEee
Q 012946 279 RAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLT 344 (452)
Q Consensus 279 ~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs 344 (452)
|.. .. +.+.++.+||||+| ...+.+|+.++++.||+|. +||+++
T Consensus 264 --~~v-----------~~-Leeal~~ADIVi~a----tgt~~lI~~e~l~~MK~ga----ilINvg 307 (435)
T 3gvp_A 264 --FRL-----------VK-LNEVIRQVDIVITC----TGNKNVVTREHLDRMKNSC----IVCNMG 307 (435)
T ss_dssp --CEE-----------CC-HHHHTTTCSEEEEC----SSCSCSBCHHHHHHSCTTE----EEEECS
T ss_pred --CEe-----------cc-HHHHHhcCCEEEEC----CCCcccCCHHHHHhcCCCc----EEEEec
Confidence 100 01 25678899999997 4567799999999999999 999987
No 21
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=97.71 E-value=5.8e-05 Score=74.20 Aligned_cols=78 Identities=14% Similarity=0.171 Sum_probs=60.7
Q ss_pred CCCCceEEEEcCcH-HHHHHHHHHhcC--CCEEeCCCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCC
Q 012946 201 GICPLVFVFTGSGH-ASIAAQELFKLL--PHTFVDPSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDS 277 (452)
Q Consensus 201 ~i~p~kv~V~G~G~-vg~gAi~~a~~L--Ga~vv~~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~ 277 (452)
++...+++|+|+|+ ||+-+...+.+. ||.| +.| .+
T Consensus 155 ~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atV-------------------------------tv~--h~--------- 192 (281)
T 2c2x_A 155 SIAGAHVVVIGRGVTVGRPLGLLLTRRSENATV-------------------------------TLC--HT--------- 192 (281)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEE-------------------------------EEE--CT---------
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEE-------------------------------EEE--EC---------
Confidence 67889999999996 799999999888 6655 111 00
Q ss_pred CCCCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEeeecC
Q 012946 278 SRAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLTCDM 347 (452)
Q Consensus 278 ~~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs~D~ 347 (452)
+.++ +.++++.+||||+++. .|.+|+.+|+ |+|. +|||++.+.
T Consensus 193 -----------~t~~-----L~~~~~~ADIVI~Avg----~p~~I~~~~v---k~Ga----vVIDVgi~r 235 (281)
T 2c2x_A 193 -----------GTRD-----LPALTRQADIVVAAVG----VAHLLTADMV---RPGA----AVIDVGVSR 235 (281)
T ss_dssp -----------TCSC-----HHHHHTTCSEEEECSC----CTTCBCGGGS---CTTC----EEEECCEEE
T ss_pred -----------chhH-----HHHHHhhCCEEEECCC----CCcccCHHHc---CCCc----EEEEccCCC
Confidence 0001 2677889999999987 5668999997 8899 999999986
No 22
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=97.63 E-value=6.7e-05 Score=73.58 Aligned_cols=88 Identities=10% Similarity=0.069 Sum_probs=65.2
Q ss_pred HHHHHHHHHhhHHHHhcCCCCCCCCceEEEEcCc-HHHHHHHHHHhcCCCEEeCCCChhhHHhhhCCCCCccccCCCCce
Q 012946 180 AAAKAAIISVGEEIATEGLPSGICPLVFVFTGSG-HASIAAQELFKLLPHTFVDPSRLPELFEKAGDSSQSTCSSSTKRV 258 (452)
Q Consensus 180 ~~~~~~~~~~g~~i~~~G~~~~i~p~kv~V~G~G-~vg~gAi~~a~~LGa~vv~~~~l~~~~e~~~~~~~~~~~~~~~~~ 258 (452)
..++++|+..+ +.-.+|+|+|.| .+|+.+...|.+.||.|.
T Consensus 137 ~gv~~lL~~~~-----------l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVt--------------------------- 178 (276)
T 3ngx_A 137 RAVIDIMDYYG-----------YHENTVTIVNRSPVVGRPLSMMLLNRNYTVS--------------------------- 178 (276)
T ss_dssp HHHHHHHHHHT-----------CCSCEEEEECCCTTTHHHHHHHHHHTTCEEE---------------------------
T ss_pred HHHHHHHHHhC-----------cCCCEEEEEcCChHHHHHHHHHHHHCCCeEE---------------------------
Confidence 45566666543 345889999987 599999999999988761
Q ss_pred eEEEeeeeecccccccCCCCCCCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeE
Q 012946 259 FQVYGCVVTSENMVEPKDSSRAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLV 338 (452)
Q Consensus 259 ~~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~ 338 (452)
+ | .+ +. .. ++++++.+||||+++- .|.+|+.+|+ |+|+
T Consensus 179 --v--~--~~--------------------~t----~~-L~~~~~~ADIVI~Avg----~p~~I~~~~v---k~Ga---- 216 (276)
T 3ngx_A 179 --V--C--HS--------------------KT----KD-IGSMTRSSKIVVVAVG----RPGFLNREMV---TPGS---- 216 (276)
T ss_dssp --E--E--CT--------------------TC----SC-HHHHHHHSSEEEECSS----CTTCBCGGGC---CTTC----
T ss_pred --E--E--eC--------------------Cc----cc-HHHhhccCCEEEECCC----CCccccHhhc---cCCc----
Confidence 0 0 00 00 00 2567889999999984 5779999987 9999
Q ss_pred EEEEeeecC
Q 012946 339 GISDLTCDM 347 (452)
Q Consensus 339 vIvDvs~D~ 347 (452)
+|||++.+.
T Consensus 217 vVIDvgi~~ 225 (276)
T 3ngx_A 217 VVIDVGINY 225 (276)
T ss_dssp EEEECCCEE
T ss_pred EEEEeccCc
Confidence 999999986
No 23
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=97.59 E-value=0.0001 Score=73.07 Aligned_cols=78 Identities=12% Similarity=0.102 Sum_probs=59.6
Q ss_pred CCCCceEEEEcCcH-HHHHHHHHHhcCCCEEeCCCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCCC
Q 012946 201 GICPLVFVFTGSGH-ASIAAQELFKLLPHTFVDPSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSSR 279 (452)
Q Consensus 201 ~i~p~kv~V~G~G~-vg~gAi~~a~~LGa~vv~~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~~ 279 (452)
.+.-.+++|+|.|. ||+.+...|.+.||.|. + | .+
T Consensus 162 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVt-----------------------------v--~--~~----------- 197 (300)
T 4a26_A 162 EMAGKRAVVLGRSNIVGAPVAALLMKENATVT-----------------------------I--V--HS----------- 197 (300)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEE-----------------------------E--E--CT-----------
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEE-----------------------------E--E--eC-----------
Confidence 55678999999866 99999999999988761 0 0 00
Q ss_pred CCcccccccCcCCcCcchHh--hhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEeeecC
Q 012946 280 AFDKNDYYEHPEQYNPIFHE--KIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLTCDM 347 (452)
Q Consensus 280 ~~~~~~~~~~~e~y~~~f~~--~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs~D~ 347 (452)
+.+ . ++ ++++.+||||+++-. |.+|+.+|+ |+|+ +|||++.+.
T Consensus 198 -~T~------------~-l~l~~~~~~ADIVI~Avg~----p~~I~~~~v---k~Ga----vVIDvgi~~ 242 (300)
T 4a26_A 198 -GTS------------T-EDMIDYLRTADIVIAAMGQ----PGYVKGEWI---KEGA----AVVDVGTTP 242 (300)
T ss_dssp -TSC------------H-HHHHHHHHTCSEEEECSCC----TTCBCGGGS---CTTC----EEEECCCEE
T ss_pred -CCC------------C-chhhhhhccCCEEEECCCC----CCCCcHHhc---CCCc----EEEEEeccC
Confidence 000 0 13 678899999999874 778999987 9999 999999864
No 24
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=97.57 E-value=0.00013 Score=75.99 Aligned_cols=89 Identities=10% Similarity=0.121 Sum_probs=63.4
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEE--eCCCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCC
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTF--VDPSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSS 278 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~ 278 (452)
.+.-.+|+|+|.|.+|++.++.|+.+|++| .+....+..... ..+
T Consensus 244 ~L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~----------~~G----------------------- 290 (464)
T 3n58_A 244 MMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAA----------MDG----------------------- 290 (464)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHH----------HTT-----------------------
T ss_pred cccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHH----------hcC-----------------------
Confidence 556789999999999999999999999987 322222222100 001
Q ss_pred CCCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEee
Q 012946 279 RAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLT 344 (452)
Q Consensus 279 ~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs 344 (452)
|.. .. +.+.++.+||||++. ..+.+|++++++.||+|+ +||.++
T Consensus 291 --~~v-----------v~-LeElL~~ADIVv~at----gt~~lI~~e~l~~MK~GA----ILINvG 334 (464)
T 3n58_A 291 --FEV-----------VT-LDDAASTADIVVTTT----GNKDVITIDHMRKMKDMC----IVGNIG 334 (464)
T ss_dssp --CEE-----------CC-HHHHGGGCSEEEECC----SSSSSBCHHHHHHSCTTE----EEEECS
T ss_pred --cee-----------cc-HHHHHhhCCEEEECC----CCccccCHHHHhcCCCCe----EEEEcC
Confidence 100 00 156778899999874 457799999999999999 888776
No 25
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=97.52 E-value=0.00028 Score=71.52 Aligned_cols=174 Identities=12% Similarity=0.120 Sum_probs=105.8
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEE--eCCCCh-hhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCC
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTF--VDPSRL-PELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDS 277 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~~~l-~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~ 277 (452)
.+.-.+|.|+|.|+.|...+..++.+|..| .++... .+..+. .+..
T Consensus 161 ~l~gktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~-----------~g~~-------------------- 209 (351)
T 3jtm_A 161 DLEGKTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKE-----------TGAK-------------------- 209 (351)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHH-----------HCCE--------------------
T ss_pred cccCCEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHh-----------CCCe--------------------
Confidence 567789999999999999999999999987 333221 111110 0100
Q ss_pred CCCCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEeee----cC------
Q 012946 278 SRAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLTC----DM------ 347 (452)
Q Consensus 278 ~~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs~----D~------ 347 (452)
+. .. +.+.++.+|||+.+.-.....-.+|+++.++.||+|+ ++||++- |.
T Consensus 210 --------~~-------~~-l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~ga----ilIN~aRG~~vde~aL~~a 269 (351)
T 3jtm_A 210 --------FV-------ED-LNEMLPKCDVIVINMPLTEKTRGMFNKELIGKLKKGV----LIVNNARGAIMERQAVVDA 269 (351)
T ss_dssp --------EC-------SC-HHHHGGGCSEEEECSCCCTTTTTCBSHHHHHHSCTTE----EEEECSCGGGBCHHHHHHH
T ss_pred --------Ec-------CC-HHHHHhcCCEEEECCCCCHHHHHhhcHHHHhcCCCCC----EEEECcCchhhCHHHHHHH
Confidence 00 11 2667889999999998877777899999999999999 9999983 11
Q ss_pred --CCCeee--ecccccCCCCEEEeCCCCCCCCCCCCCCCeEEEeeCCcCCcchHHHHHHHHHHHHHHHHHhhcccccccC
Q 012946 348 --EGSIEI--LNQTTTIDSPFFRYDPKNDSYHHDMEGDGIICSVVDNLPTEFPKEASQHFGGLLSQFIGSLASVADIAKL 423 (452)
Q Consensus 348 --gG~iE~--~~~~Tt~~~P~~~~~~~~~~~~~~~~~~gV~~~~vdnLPs~lp~~AS~~fs~~l~~~l~~l~~~~~~~~~ 423 (452)
.|.+-. ++ +|..+|.. ..++-+..+. ++.-+|+.+ ...+|-..++.....-|..+.++..+
T Consensus 270 L~~g~i~ga~lD--------V~~~EP~~-~~~pL~~~~n--vilTPHia~-~t~ea~~~~~~~~~~nl~~~~~g~~~--- 334 (351)
T 3jtm_A 270 VESGHIGGYSGD--------VWDPQPAP-KDHPWRYMPN--QAMTPHTSG-TTIDAQLRYAAGTKDMLERYFKGEDF--- 334 (351)
T ss_dssp HHHTSEEEEEES--------CCSSSSCC-TTCGGGTSTT--BCCCCSCGG-GSHHHHHHHHHHHHHHHHHHHHTCCC---
T ss_pred HHhCCccEEEeC--------CCCCCCCC-CCChhhcCCC--EEECCcCCC-CCHHHHHHHHHHHHHHHHHHHcCCCC---
Confidence 133331 11 11111100 0011112223 334466644 45666666666666666666555321
Q ss_pred CHHHHhchhhcCCeecCCCC
Q 012946 424 PGNLRRACIAHGGALTSLYE 443 (452)
Q Consensus 424 ~~~l~~a~i~~~G~lt~~~~ 443 (452)
-..-+|..+|++..+|.
T Consensus 335 ---~~~~~i~~~~~~~~~~~ 351 (351)
T 3jtm_A 335 ---PTENYIVKDGELAPQYR 351 (351)
T ss_dssp ---CGGGEEEETTEECGGGC
T ss_pred ---CCceEEecCCccccccC
Confidence 12346889999987773
No 26
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=97.51 E-value=0.00019 Score=74.57 Aligned_cols=89 Identities=7% Similarity=0.121 Sum_probs=64.6
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEE--eCCCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCC
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTF--VDPSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSS 278 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~ 278 (452)
.+.-.+|+|+|.|.+|++.+..++.+|+.| .++...+..... ..+
T Consensus 208 ~L~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~----------~~G----------------------- 254 (436)
T 3h9u_A 208 MIAGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAA----------MEG----------------------- 254 (436)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH----------HTT-----------------------
T ss_pred cccCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHH----------HhC-----------------------
Confidence 556789999999999999999999999987 344332221100 001
Q ss_pred CCCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEee
Q 012946 279 RAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLT 344 (452)
Q Consensus 279 ~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs 344 (452)
|.. .. +.+.++.+||||.+ ...+.+|+.++++.||+|+ +|++++
T Consensus 255 --~~~-----------~s-L~eal~~ADVVilt----~gt~~iI~~e~l~~MK~gA----IVINvg 298 (436)
T 3h9u_A 255 --YQV-----------LL-VEDVVEEAHIFVTT----TGNDDIITSEHFPRMRDDA----IVCNIG 298 (436)
T ss_dssp --CEE-----------CC-HHHHTTTCSEEEEC----SSCSCSBCTTTGGGCCTTE----EEEECS
T ss_pred --Cee-----------cC-HHHHHhhCCEEEEC----CCCcCccCHHHHhhcCCCc----EEEEeC
Confidence 100 01 26778899999974 3466799999999999999 999998
No 27
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=97.50 E-value=0.00021 Score=72.36 Aligned_cols=171 Identities=8% Similarity=0.026 Sum_probs=102.6
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEE--eCCCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCC
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTF--VDPSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSS 278 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~ 278 (452)
.+.-.+|.|+|.|..|+..+..++.+|.+| .++....+.... .+..
T Consensus 157 ~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~-----------~g~~--------------------- 204 (352)
T 3gg9_A 157 VLKGQTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRENSKERARA-----------DGFA--------------------- 204 (352)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSHHHHHHHHH-----------TTCE---------------------
T ss_pred cCCCCEEEEEeECHHHHHHHHHHHhCCCEEEEECCCCCHHHHHh-----------cCce---------------------
Confidence 567789999999999999999999999987 333211111100 0100
Q ss_pred CCCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEeee----cC-------
Q 012946 279 RAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLTC----DM------- 347 (452)
Q Consensus 279 ~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs~----D~------- 347 (452)
+. .. +.+.++.+|+|+.+.-.....-.+|+.+.++.||+|+ ++||++- |.
T Consensus 205 -------~~-------~~-l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~ga----ilIN~aRg~~vd~~aL~~aL 265 (352)
T 3gg9_A 205 -------VA-------ES-KDALFEQSDVLSVHLRLNDETRSIITVADLTRMKPTA----LFVNTSRAELVEENGMVTAL 265 (352)
T ss_dssp -------EC-------SS-HHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTC----EEEECSCGGGBCTTHHHHHH
T ss_pred -------Ee-------CC-HHHHHhhCCEEEEeccCcHHHHHhhCHHHHhhCCCCc----EEEECCCchhhcHHHHHHHH
Confidence 00 11 1567788999999998877677799999999999999 9999982 11
Q ss_pred -CCCeee--e----cccccCCCCEEEeCCCCCCCCCCCCCCCeEEEeeCCcCCcchHHHHHHHHHHHHHHHHHhhccccc
Q 012946 348 -EGSIEI--L----NQTTTIDSPFFRYDPKNDSYHHDMEGDGIICSVVDNLPTEFPKEASQHFGGLLSQFIGSLASVADI 420 (452)
Q Consensus 348 -gG~iE~--~----~~~Tt~~~P~~~~~~~~~~~~~~~~~~gV~~~~vdnLPs~lp~~AS~~fs~~l~~~l~~l~~~~~~ 420 (452)
.|.+.. + ..|-..+.|.+ ..+.| +.-+|+.+ ...++-..+......-|..+.++...
T Consensus 266 ~~g~i~gA~lDV~~~EPl~~~~pL~-------------~~~nv--ilTPHia~-~t~e~~~~~~~~~~~ni~~~~~G~p~ 329 (352)
T 3gg9_A 266 NRGRPGMAAIDVFETEPILQGHTLL-------------RMENC--ICTPHIGY-VERESYEMYFGIAFQNILDILQGNVD 329 (352)
T ss_dssp HHTSSSEEEECCCSSSCCCSCCGGG-------------GCTTE--EECCSCTT-CBHHHHHHHHHHHHHHHHHHHTTCCT
T ss_pred HhCCccEEEecccCCCCCCCCChhh-------------cCCCE--EECCCCCC-CCHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 122211 0 11111122222 22344 45577744 55566555665555555555555443
Q ss_pred c-cCCHHHHhchhhcCCee
Q 012946 421 A-KLPGNLRRACIAHGGAL 438 (452)
Q Consensus 421 ~-~~~~~l~~a~i~~~G~l 438 (452)
+ -..+.++.+++-..|+-
T Consensus 330 ~~Vn~~~~~~~~~~~~~~~ 348 (352)
T 3gg9_A 330 SVANPTALAPALIRAEGHH 348 (352)
T ss_dssp TBSCGGGSSCTTTC-----
T ss_pred cccCHHHHHHHHHhhcccc
Confidence 3 44667777887777753
No 28
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=97.43 E-value=8.2e-05 Score=74.51 Aligned_cols=101 Identities=9% Similarity=0.035 Sum_probs=64.4
Q ss_pred CCCCceEEEEcCcH-HHHHHHHHHhcCCCEE-eCCCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCC
Q 012946 201 GICPLVFVFTGSGH-ASIAAQELFKLLPHTF-VDPSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSS 278 (452)
Q Consensus 201 ~i~p~kv~V~G~G~-vg~gAi~~a~~LGa~v-v~~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~ 278 (452)
++.+.+|+|+|+|. ||.-+...+.+.||.| +-..+..++.+.. ..++...
T Consensus 174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra--------~~la~~~-------------------- 225 (320)
T 1edz_A 174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRG--------ESLKLNK-------------------- 225 (320)
T ss_dssp TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESC--------CCSSCCC--------------------
T ss_pred CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHH--------HHHhhhc--------------------
Confidence 67899999999995 7999999999999987 3222211111000 0001000
Q ss_pred CCCcccccc-cCcCCcCcchHhhhcCCCcEEEeccccCCCCCcc-cCHHHHHHhhcCCCCeEEEEEeeecC
Q 012946 279 RAFDKNDYY-EHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRL-LSTQQLRDLAQKGCPLVGISDLTCDM 347 (452)
Q Consensus 279 ~~~~~~~~~-~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~L-it~e~l~~mk~gs~~l~vIvDvs~D~ 347 (452)
.....+. .+++ -+.+.++.+||||+++.. |.+ |+.+|+ |+|. +|+||+.+.
T Consensus 226 --~~~t~~~~t~~~-----~L~e~l~~ADIVIsAtg~----p~~vI~~e~v---k~Ga----vVIDVgi~r 278 (320)
T 1edz_A 226 --HHVEDLGEYSED-----LLKKCSLDSDVVITGVPS----ENYKFPTEYI---KEGA----VCINFACTK 278 (320)
T ss_dssp --CEEEEEEECCHH-----HHHHHHHHCSEEEECCCC----TTCCBCTTTS---CTTE----EEEECSSSC
T ss_pred --ccccccccccHh-----HHHHHhccCCEEEECCCC----CcceeCHHHc---CCCe----EEEEcCCCc
Confidence 0000000 0001 136788899999999875 545 999997 8898 999999987
No 29
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=97.24 E-value=0.00045 Score=68.22 Aligned_cols=89 Identities=9% Similarity=0.011 Sum_probs=66.7
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEE--eCCCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCC
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTF--VDPSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSS 278 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~ 278 (452)
.+.-.+|.|+|.|+.|...+..++.+|.+| .++.. +...
T Consensus 119 ~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~-~~~~-------------------------------------- 159 (290)
T 3gvx_A 119 LLYGKALGILGYGGIGRRVAHLAKAFGMRVIAYTRSS-VDQN-------------------------------------- 159 (290)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSC-CCTT--------------------------------------
T ss_pred eeecchheeeccCchhHHHHHHHHhhCcEEEEEeccc-cccc--------------------------------------
Confidence 456789999999999999999999998876 22200 0000
Q ss_pred CCCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEee
Q 012946 279 RAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLT 344 (452)
Q Consensus 279 ~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs 344 (452)
.+ ++ ... +.+.++.+|+|+.+.-.....-.+|+++.++.||+|+ +|||+|
T Consensus 160 -~~---~~-------~~~-l~ell~~aDiV~l~~P~t~~t~~li~~~~l~~mk~ga----ilIN~a 209 (290)
T 3gvx_A 160 -VD---VI-------SES-PADLFRQSDFVLIAIPLTDKTRGMVNSRLLANARKNL----TIVNVA 209 (290)
T ss_dssp -CS---EE-------CSS-HHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTCCTTC----EEEECS
T ss_pred -cc---cc-------cCC-hHHHhhccCeEEEEeeccccchhhhhHHHHhhhhcCc----eEEEee
Confidence 00 00 011 2667888999999998877777899999999999999 999998
No 30
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=97.18 E-value=0.00082 Score=68.43 Aligned_cols=92 Identities=13% Similarity=0.106 Sum_probs=67.0
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEE--eCCCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCC
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTF--VDPSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSS 278 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~ 278 (452)
.+.-.+|.|+|.|+.|+..+..++.+|.+| .++..-.+..+. .+..
T Consensus 173 ~l~gktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~-----------~g~~--------------------- 220 (365)
T 4hy3_A 173 LIAGSEIGIVGFGDLGKALRRVLSGFRARIRVFDPWLPRSMLEE-----------NGVE--------------------- 220 (365)
T ss_dssp CSSSSEEEEECCSHHHHHHHHHHTTSCCEEEEECSSSCHHHHHH-----------TTCE---------------------
T ss_pred ccCCCEEEEecCCcccHHHHHhhhhCCCEEEEECCCCCHHHHhh-----------cCee---------------------
Confidence 566789999999999999999999999987 343321111110 0100
Q ss_pred CCCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEee
Q 012946 279 RAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLT 344 (452)
Q Consensus 279 ~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs 344 (452)
+ .. +.+.++.+|||+.+.-.....-.+|+.+.++.||+|+ ++||+|
T Consensus 221 --------------~-~~-l~ell~~aDvV~l~~Plt~~T~~li~~~~l~~mk~ga----ilIN~a 266 (365)
T 4hy3_A 221 --------------P-AS-LEDVLTKSDFIFVVAAVTSENKRFLGAEAFSSMRRGA----AFILLS 266 (365)
T ss_dssp --------------E-CC-HHHHHHSCSEEEECSCSSCC---CCCHHHHHTSCTTC----EEEECS
T ss_pred --------------e-CC-HHHHHhcCCEEEEcCcCCHHHHhhcCHHHHhcCCCCc----EEEECc
Confidence 0 11 2667889999999998877778899999999999999 999998
No 31
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=97.13 E-value=0.00096 Score=67.37 Aligned_cols=90 Identities=17% Similarity=0.214 Sum_probs=68.1
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEE--eCCCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCC
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTF--VDPSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSS 278 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~ 278 (452)
.+.-.+|.|+|.|+.|+..+..++.+|.+| .++..-+... .
T Consensus 145 ~l~gktvgIiGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~~---------------~---------------------- 187 (343)
T 2yq5_A 145 EIYNLTVGLIGVGHIGSAVAEIFSAMGAKVIAYDVAYNPEFE---------------P---------------------- 187 (343)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCGGGT---------------T----------------------
T ss_pred ccCCCeEEEEecCHHHHHHHHHHhhCCCEEEEECCChhhhhh---------------c----------------------
Confidence 566789999999999999999999999877 3321111110 0
Q ss_pred CCCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEee
Q 012946 279 RAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLT 344 (452)
Q Consensus 279 ~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs 344 (452)
.. .+ .. +++.++.+|||+.+.-.....-.+|+++.++.||+|+ ++||++
T Consensus 188 -~~---~~--------~~-l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~ga----ilIN~a 236 (343)
T 2yq5_A 188 -FL---TY--------TD-FDTVLKEADIVSLHTPLFPSTENMIGEKQLKEMKKSA----YLINCA 236 (343)
T ss_dssp -TC---EE--------CC-HHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTC----EEEECS
T ss_pred -cc---cc--------cC-HHHHHhcCCEEEEcCCCCHHHHHHhhHHHHhhCCCCc----EEEECC
Confidence 00 00 01 2567888999999998877777899999999999999 999998
No 32
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=97.12 E-value=0.00071 Score=67.87 Aligned_cols=92 Identities=10% Similarity=0.044 Sum_probs=68.9
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEE--eCCCC-hhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCC
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTF--VDPSR-LPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDS 277 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~~~-l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~ 277 (452)
.+.-.+|.|+|.|+.|...+..++.+|.+| .++.. -.+..+. .+. .
T Consensus 142 ~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~-----------~g~--------~------------ 190 (330)
T 4e5n_A 142 GLDNATVGFLGMGAIGLAMADRLQGWGATLQYHEAKALDTQTEQR-----------LGL--------R------------ 190 (330)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHTTTSCCEEEEECSSCCCHHHHHH-----------HTE--------E------------
T ss_pred ccCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCCCcHhHHHh-----------cCc--------e------------
Confidence 566789999999999999999999999987 34332 1111100 010 0
Q ss_pred CCCCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEee
Q 012946 278 SRAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLT 344 (452)
Q Consensus 278 ~~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs 344 (452)
+ .. +.+.++.+|+|+.+.-.....-.+|+++.++.||+|+ ++||++
T Consensus 191 --------~--------~~-l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga----ilIN~a 236 (330)
T 4e5n_A 191 --------Q--------VA-CSELFASSDFILLALPLNADTLHLVNAELLALVRPGA----LLVNPC 236 (330)
T ss_dssp --------E--------CC-HHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTE----EEEECS
T ss_pred --------e--------CC-HHHHHhhCCEEEEcCCCCHHHHHHhCHHHHhhCCCCc----EEEECC
Confidence 0 00 2567778999999998877778899999999999999 999998
No 33
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=97.11 E-value=0.00096 Score=67.04 Aligned_cols=91 Identities=11% Similarity=0.105 Sum_probs=68.7
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEE--eCCCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCC
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTF--VDPSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSS 278 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~ 278 (452)
.+.-.+|.|+|.|+.|+..+..++.+|.+| .++..-....+. +..
T Consensus 138 ~l~g~tvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~------------g~~--------------------- 184 (334)
T 2pi1_A 138 ELNRLTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKREDLKEK------------GCV--------------------- 184 (334)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHT------------TCE---------------------
T ss_pred eccCceEEEECcCHHHHHHHHHHHHCcCEEEEECCCcchhhHhc------------Cce---------------------
Confidence 566789999999999999999999999987 333221111100 000
Q ss_pred CCCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEee
Q 012946 279 RAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLT 344 (452)
Q Consensus 279 ~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs 344 (452)
+.+ +.+.++.+|||+.+.-.....-.+|+++.++.||+|+ ++||++
T Consensus 185 --------------~~~--l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga----ilIN~a 230 (334)
T 2pi1_A 185 --------------YTS--LDELLKESDVISLHVPYTKETHHMINEERISLMKDGV----YLINTA 230 (334)
T ss_dssp --------------ECC--HHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTE----EEEECS
T ss_pred --------------ecC--HHHHHhhCCEEEEeCCCChHHHHhhCHHHHhhCCCCc----EEEECC
Confidence 001 2667888999999998877777899999999999999 999998
No 34
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=97.11 E-value=0.00092 Score=67.53 Aligned_cols=92 Identities=10% Similarity=0.131 Sum_probs=68.4
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEE--eCCCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCC
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTF--VDPSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSS 278 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~ 278 (452)
.+.-.+|.|+|.|+.|+..+..++.+|.+| .++.......+ . +..
T Consensus 170 ~l~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~-----------~-g~~--------------------- 216 (345)
T 4g2n_A 170 GLTGRRLGIFGMGRIGRAIATRARGFGLAIHYHNRTRLSHALE-----------E-GAI--------------------- 216 (345)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHH-----------T-TCE---------------------
T ss_pred ccCCCEEEEEEeChhHHHHHHHHHHCCCEEEEECCCCcchhhh-----------c-CCe---------------------
Confidence 566789999999999999999999999987 33322111110 0 000
Q ss_pred CCCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEee
Q 012946 279 RAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLT 344 (452)
Q Consensus 279 ~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs 344 (452)
+. .. +.+.++.+|+|+.+.-.....-.+|+++.++.||+|+ ++||+|
T Consensus 217 -------~~-------~~-l~ell~~sDvV~l~~Plt~~T~~li~~~~l~~mk~ga----ilIN~a 263 (345)
T 4g2n_A 217 -------YH-------DT-LDSLLGASDIFLIAAPGRPELKGFLDHDRIAKIPEGA----VVINIS 263 (345)
T ss_dssp -------EC-------SS-HHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHSCTTE----EEEECS
T ss_pred -------Ee-------CC-HHHHHhhCCEEEEecCCCHHHHHHhCHHHHhhCCCCc----EEEECC
Confidence 00 11 2667888999999998776677799999999999999 999998
No 35
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=97.08 E-value=0.00099 Score=66.70 Aligned_cols=92 Identities=13% Similarity=0.110 Sum_probs=66.8
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEE--eCCCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCC
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTF--VDPSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSS 278 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~ 278 (452)
.+.-.+|.|+|.|+.|...+..++.+|.+| .++.. +...
T Consensus 134 ~l~gktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~-~~~~-------------------------------------- 174 (324)
T 3evt_A 134 TLTGQQLLIYGTGQIGQSLAAKASALGMHVIGVNTTG-HPAD-------------------------------------- 174 (324)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC-CCCT--------------------------------------
T ss_pred cccCCeEEEECcCHHHHHHHHHHHhCCCEEEEECCCc-chhH--------------------------------------
Confidence 567789999999999999999999999876 22110 0000
Q ss_pred CCCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEee
Q 012946 279 RAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLT 344 (452)
Q Consensus 279 ~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs 344 (452)
.++.. + . . ..+ .+.++.+|+|+.+.-.....-.+|+++.++.||+|+ ++||+|
T Consensus 175 -~~~~~-~-~-~----~~l-~ell~~aDvV~l~lPlt~~t~~li~~~~l~~mk~ga----ilIN~a 227 (324)
T 3evt_A 175 -HFHET-V-A-F----TAT-ADALATANFIVNALPLTPTTHHLFSTELFQQTKQQP----MLINIG 227 (324)
T ss_dssp -TCSEE-E-E-G----GGC-HHHHHHCSEEEECCCCCGGGTTCBSHHHHHTCCSCC----EEEECS
T ss_pred -hHhhc-c-c-c----CCH-HHHHhhCCEEEEcCCCchHHHHhcCHHHHhcCCCCC----EEEEcC
Confidence 00000 0 0 0 111 567788999999987766667799999999999999 999998
No 36
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=97.08 E-value=0.0013 Score=65.30 Aligned_cols=93 Identities=10% Similarity=0.102 Sum_probs=68.1
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEE--eCCCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCC
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTF--VDPSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSS 278 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~ 278 (452)
.+...+|.|+|.|+.|...+..++.+|..| .++..-++.... .+..
T Consensus 139 ~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~-----------~g~~--------------------- 186 (307)
T 1wwk_A 139 ELEGKTIGIIGFGRIGYQVAKIANALGMNILLYDPYPNEERAKE-----------VNGK--------------------- 186 (307)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHH-----------TTCE---------------------
T ss_pred ccCCceEEEEccCHHHHHHHHHHHHCCCEEEEECCCCChhhHhh-----------cCcc---------------------
Confidence 567789999999999999999999999977 333222211100 0100
Q ss_pred CCCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEeee
Q 012946 279 RAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLTC 345 (452)
Q Consensus 279 ~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs~ 345 (452)
+. . +.+.++.+|+||.+.-.....-.+|+++.++.||+|+ ++||++-
T Consensus 187 -------~~-~--------l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga----~lin~ar 233 (307)
T 1wwk_A 187 -------FV-D--------LETLLKESDVVTIHVPLVESTYHLINEERLKLMKKTA----ILINTSR 233 (307)
T ss_dssp -------EC-C--------HHHHHHHCSEEEECCCCSTTTTTCBCHHHHHHSCTTC----EEEECSC
T ss_pred -------cc-C--------HHHHHhhCCEEEEecCCChHHhhhcCHHHHhcCCCCe----EEEECCC
Confidence 00 0 1456778999999987766667799999999999999 9999985
No 37
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=97.04 E-value=0.0014 Score=65.86 Aligned_cols=93 Identities=13% Similarity=0.038 Sum_probs=69.0
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEE--eCCCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCC
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTF--VDPSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSS 278 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~ 278 (452)
.+.-.+|.|+|.|..|...+..++.+|.+| .++..-++.... .+..
T Consensus 162 ~l~g~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~-----------~g~~--------------------- 209 (335)
T 2g76_A 162 ELNGKTLGILGLGRIGREVATRMQSFGMKTIGYDPIISPEVSAS-----------FGVQ--------------------- 209 (335)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSCHHHHHH-----------TTCE---------------------
T ss_pred CCCcCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchhhhhh-----------cCce---------------------
Confidence 567789999999999999999999999977 343222211100 0100
Q ss_pred CCCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEeee
Q 012946 279 RAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLTC 345 (452)
Q Consensus 279 ~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs~ 345 (452)
+ .. +.+.++.+|+|+.+.-.....-.+|+++.++.||+|+ ++||++-
T Consensus 210 -------~--------~~-l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga----ilIN~ar 256 (335)
T 2g76_A 210 -------Q--------LP-LEEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGV----RVVNCAR 256 (335)
T ss_dssp -------E--------CC-HHHHGGGCSEEEECCCCCTTTTTSBCHHHHTTSCTTE----EEEECSC
T ss_pred -------e--------CC-HHHHHhcCCEEEEecCCCHHHHHhhCHHHHhhCCCCc----EEEECCC
Confidence 0 01 1567788999999988776677899999999999999 9999985
No 38
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=97.01 E-value=0.0013 Score=66.21 Aligned_cols=89 Identities=11% Similarity=0.056 Sum_probs=58.7
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEE--eCCCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCC
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTF--VDPSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSS 278 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~ 278 (452)
.+.-.+|.|+|.|+.|...+..++.+|.+| .++...+ .
T Consensus 168 ~l~gktiGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~--~-------------------------------------- 207 (340)
T 4dgs_A 168 SPKGKRIGVLGLGQIGRALASRAEAFGMSVRYWNRSTLS--G-------------------------------------- 207 (340)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCT--T--------------------------------------
T ss_pred cccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCccc--c--------------------------------------
Confidence 567789999999999999999999998876 2211000 0
Q ss_pred CCCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEee
Q 012946 279 RAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLT 344 (452)
Q Consensus 279 ~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs 344 (452)
.++. +. .. +.+.++.+|+|+.+.-.....-.+|+++.++.||+|+ ++||++
T Consensus 208 ~~~~---~~-------~s-l~ell~~aDvVil~vP~t~~t~~li~~~~l~~mk~ga----ilIN~a 258 (340)
T 4dgs_A 208 VDWI---AH-------QS-PVDLARDSDVLAVCVAASAATQNIVDASLLQALGPEG----IVVNVA 258 (340)
T ss_dssp SCCE---EC-------SS-HHHHHHTCSEEEECC----------CHHHHHHTTTTC----EEEECS
T ss_pred cCce---ec-------CC-HHHHHhcCCEEEEeCCCCHHHHHHhhHHHHhcCCCCC----EEEECC
Confidence 0000 00 11 2667889999999988776677799999999999999 999997
No 39
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=97.01 E-value=0.0014 Score=65.03 Aligned_cols=93 Identities=12% Similarity=0.048 Sum_probs=68.2
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEE--eCCCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCC
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTF--VDPSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSS 278 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~ 278 (452)
.+...+|.|+|.|+.|+..+..++.+|..| .++..-+...+. .+..
T Consensus 139 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~-----------~g~~--------------------- 186 (313)
T 2ekl_A 139 ELAGKTIGIVGFGRIGTKVGIIANAMGMKVLAYDILDIREKAEK-----------INAK--------------------- 186 (313)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHH-----------TTCE---------------------
T ss_pred CCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCcchhHHHh-----------cCce---------------------
Confidence 567789999999999999999999999977 333221111110 0100
Q ss_pred CCCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEeee
Q 012946 279 RAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLTC 345 (452)
Q Consensus 279 ~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs~ 345 (452)
+ .. +.+.++.+|+|+.+.-.......+|+++.++.||+|+ ++||++-
T Consensus 187 -------~-~~--------l~ell~~aDvVvl~~P~~~~t~~li~~~~l~~mk~ga----~lIn~ar 233 (313)
T 2ekl_A 187 -------A-VS--------LEELLKNSDVISLHVTVSKDAKPIIDYPQFELMKDNV----IIVNTSR 233 (313)
T ss_dssp -------E-CC--------HHHHHHHCSEEEECCCCCTTSCCSBCHHHHHHSCTTE----EEEESSC
T ss_pred -------e-cC--------HHHHHhhCCEEEEeccCChHHHHhhCHHHHhcCCCCC----EEEECCC
Confidence 0 00 1456778999999987766677899999999999999 9999985
No 40
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=96.99 E-value=0.0015 Score=66.96 Aligned_cols=89 Identities=13% Similarity=0.078 Sum_probs=66.1
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEE--eCCCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCC
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTF--VDPSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSS 278 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~ 278 (452)
.+.-.+|.|+|.|+.|...++.++.+|.+| .++ .++.. + ..
T Consensus 116 ~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~--~~~~~--------------~---------------------~~ 158 (381)
T 3oet_A 116 SLRDRTIGIVGVGNVGSRLQTRLEALGIRTLLCDP--PRAAR--------------G---------------------DE 158 (381)
T ss_dssp CGGGCEEEEECCSHHHHHHHHHHHHTTCEEEEECH--HHHHT--------------T---------------------CC
T ss_pred ccCCCEEEEEeECHHHHHHHHHHHHCCCEEEEECC--ChHHh--------------c---------------------cC
Confidence 455688999999999999999999999877 222 11100 0 00
Q ss_pred CCCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCC----CCcccCHHHHHHhhcCCCCeEEEEEee
Q 012946 279 RAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQ----FPRLLSTQQLRDLAQKGCPLVGISDLT 344 (452)
Q Consensus 279 ~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~----~P~Lit~e~l~~mk~gs~~l~vIvDvs 344 (452)
..+ .. +++.++.+|||+.+.-.... .-.+|+++.++.||+|+ ++||+|
T Consensus 159 ~~~-------------~s-l~ell~~aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk~ga----ilIN~a 210 (381)
T 3oet_A 159 GDF-------------RT-LDELVQEADVLTFHTPLYKDGPYKTLHLADETLIRRLKPGA----ILINAC 210 (381)
T ss_dssp SCB-------------CC-HHHHHHHCSEEEECCCCCCSSTTCCTTSBCHHHHHHSCTTE----EEEECS
T ss_pred ccc-------------CC-HHHHHhhCCEEEEcCcCCccccccchhhcCHHHHhcCCCCc----EEEECC
Confidence 001 11 26678889999999987754 66899999999999999 999998
No 41
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=96.98 E-value=0.0019 Score=63.86 Aligned_cols=89 Identities=13% Similarity=0.083 Sum_probs=66.4
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEEe--CCCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCC
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTFV--DPSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSS 278 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~vv--~~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~ 278 (452)
.+...+|.|+|.|+.|...+..++.+|.+|+ ++... . .
T Consensus 121 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~dr~~~---~------------------------------------~- 160 (303)
T 1qp8_A 121 LIQGEKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPK---E------------------------------------G- 160 (303)
T ss_dssp CCTTCEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCC---C------------------------------------S-
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcc---c------------------------------------c-
Confidence 5678899999999999999999999987651 11000 0 0
Q ss_pred CCCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEeee
Q 012946 279 RAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLTC 345 (452)
Q Consensus 279 ~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs~ 345 (452)
++. .. ..+ .+.++.+|+|+.+.-.....-.+|+++.++.||+|+ ++||+|-
T Consensus 161 -~~~---~~-------~~l-~ell~~aDvV~l~~P~~~~t~~~i~~~~l~~mk~ga----ilin~sr 211 (303)
T 1qp8_A 161 -PWR---FT-------NSL-EEALREARAAVCALPLNKHTRGLVKYQHLALMAEDA----VFVNVGR 211 (303)
T ss_dssp -SSC---CB-------SCS-HHHHTTCSEEEECCCCSTTTTTCBCHHHHTTSCTTC----EEEECSC
T ss_pred -Ccc---cC-------CCH-HHHHhhCCEEEEeCcCchHHHHHhCHHHHhhCCCCC----EEEECCC
Confidence 000 00 111 567889999999998876677799999999999999 9999984
No 42
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=96.95 E-value=0.0012 Score=66.17 Aligned_cols=90 Identities=10% Similarity=0.083 Sum_probs=66.6
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEE--eCCCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCC
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTF--VDPSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSS 278 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~ 278 (452)
.+...+|.|+|.|+.|+..+..++.+|.+| .++..-+...
T Consensus 143 ~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~-------------------------------------- 184 (331)
T 1xdw_A 143 EVRNCTVGVVGLGRIGRVAAQIFHGMGATVIGEDVFEIKGIE-------------------------------------- 184 (331)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSCT--------------------------------------
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCccHHHH--------------------------------------
Confidence 567789999999999999999999999876 2221000000
Q ss_pred CCCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEee
Q 012946 279 RAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLT 344 (452)
Q Consensus 279 ~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs 344 (452)
.+. .+ .. +.+.++.+|+|+.+.-.......+|+++.++.||+|+ ++||+|
T Consensus 185 -~~~--~~--------~~-l~ell~~aDvV~~~~p~t~~t~~li~~~~l~~mk~ga----~lin~s 234 (331)
T 1xdw_A 185 -DYC--TQ--------VS-LDEVLEKSDIITIHAPYIKENGAVVTRDFLKKMKDGA----ILVNCA 234 (331)
T ss_dssp -TTC--EE--------CC-HHHHHHHCSEEEECCCCCTTTCCSBCHHHHHTSCTTE----EEEECS
T ss_pred -hcc--cc--------CC-HHHHHhhCCEEEEecCCchHHHHHhCHHHHhhCCCCc----EEEECC
Confidence 000 00 01 2566778999999987776777899999999999999 999998
No 43
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=96.94 E-value=0.00072 Score=67.76 Aligned_cols=93 Identities=16% Similarity=0.221 Sum_probs=67.9
Q ss_pred CCCCCceEEEEcCcHHHHHHHHHHhcCCCEE--eCCCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCC
Q 012946 200 SGICPLVFVFTGSGHASIAAQELFKLLPHTF--VDPSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDS 277 (452)
Q Consensus 200 ~~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~ 277 (452)
..+.-.+|.|+|.|+.|+..+..++.+|..| .++.. +...
T Consensus 136 ~~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~-~~~~------------------------------------- 177 (324)
T 3hg7_A 136 QGLKGRTLLILGTGSIGQHIAHTGKHFGMKVLGVSRSG-RERA------------------------------------- 177 (324)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC-CCCT-------------------------------------
T ss_pred cccccceEEEEEECHHHHHHHHHHHhCCCEEEEEcCCh-HHhh-------------------------------------
Confidence 3567789999999999999999999999877 22211 0000
Q ss_pred CCCCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEee
Q 012946 278 SRAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLT 344 (452)
Q Consensus 278 ~~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs 344 (452)
.+.. .. . + .. +.+.++.+|||+.+.-.....-.+|+++.++.||+|+ ++||++
T Consensus 178 --~~~~--~~-~---~-~~-l~ell~~aDvV~l~lPlt~~T~~li~~~~l~~mk~ga----ilIN~a 230 (324)
T 3hg7_A 178 --GFDQ--VY-Q---L-PA-LNKMLAQADVIVSVLPATRETHHLFTASRFEHCKPGA----ILFNVG 230 (324)
T ss_dssp --TCSE--EE-C---G-GG-HHHHHHTCSEEEECCCCCSSSTTSBCTTTTTCSCTTC----EEEECS
T ss_pred --hhhc--cc-c---c-CC-HHHHHhhCCEEEEeCCCCHHHHHHhHHHHHhcCCCCc----EEEECC
Confidence 0000 00 0 0 11 2667889999999988776677789999999999999 999998
No 44
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=96.90 E-value=0.0012 Score=68.29 Aligned_cols=90 Identities=13% Similarity=0.096 Sum_probs=63.5
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEE--eCCCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCC
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTF--VDPSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSS 278 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~ 278 (452)
.+.-.++.|+|.|+.|...+..++.+|.+| .++... .. .+
T Consensus 153 el~gktvGIIGlG~IG~~vA~~l~~~G~~V~~yd~~~~--~~-----------------------------------~~- 194 (416)
T 3k5p_A 153 EVRGKTLGIVGYGNIGSQVGNLAESLGMTVRYYDTSDK--LQ-----------------------------------YG- 194 (416)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC--CC-----------------------------------BT-
T ss_pred cCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCcch--hc-----------------------------------cc-
Confidence 566789999999999999999999999877 222100 00 00
Q ss_pred CCCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEee
Q 012946 279 RAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLT 344 (452)
Q Consensus 279 ~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs 344 (452)
+. ... .. +++.++.+|+|+.+.-.....-.+|+++.++.||+|+ ++||+|
T Consensus 195 -~~---~~~-------~s-l~ell~~aDvV~lhvPlt~~T~~li~~~~l~~mk~ga----ilIN~a 244 (416)
T 3k5p_A 195 -NV---KPA-------AS-LDELLKTSDVVSLHVPSSKSTSKLITEAKLRKMKKGA----FLINNA 244 (416)
T ss_dssp -TB---EEC-------SS-HHHHHHHCSEEEECCCC-----CCBCHHHHHHSCTTE----EEEECS
T ss_pred -Cc---Eec-------CC-HHHHHhhCCEEEEeCCCCHHHhhhcCHHHHhhCCCCc----EEEECC
Confidence 00 000 11 2667889999999988776677899999999999999 999998
No 45
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=96.85 E-value=0.0015 Score=65.98 Aligned_cols=94 Identities=10% Similarity=-0.001 Sum_probs=67.4
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEE--eCCCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCC
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTF--VDPSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSS 278 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~ 278 (452)
.+...+|.|+|.|+.|+..+..++.+|.+| .++..-+...+. .+..
T Consensus 165 ~l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~-----------~g~~--------------------- 212 (347)
T 1mx3_A 165 RIRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDGVERA-----------LGLQ--------------------- 212 (347)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCTTHHHH-----------HTCE---------------------
T ss_pred CCCCCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchhhHhh-----------cCCe---------------------
Confidence 567789999999999999999999999977 333211111100 0000
Q ss_pred CCCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEeee
Q 012946 279 RAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLTC 345 (452)
Q Consensus 279 ~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs~ 345 (452)
+. .. +.+.++.+|||+.+.-.....-.+|+++.++.||+|. ++||++-
T Consensus 213 -------~~-------~~-l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga----ilIN~ar 260 (347)
T 1mx3_A 213 -------RV-------ST-LQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGA----FLVNTAR 260 (347)
T ss_dssp -------EC-------SS-HHHHHHHCSEEEECCCCCTTCTTSBSHHHHTTSCTTE----EEEECSC
T ss_pred -------ec-------CC-HHHHHhcCCEEEEcCCCCHHHHHHhHHHHHhcCCCCC----EEEECCC
Confidence 00 01 1556778999999988766667799999999999999 9999883
No 46
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=96.80 E-value=0.001 Score=66.31 Aligned_cols=92 Identities=12% Similarity=0.080 Sum_probs=66.4
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEE--eCCCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCC
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTF--VDPSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSS 278 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~ 278 (452)
.+.-.+|.|+|.|+.|+..+..++.+|.+| .++. .+...
T Consensus 136 ~l~g~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~-~~~~~-------------------------------------- 176 (315)
T 3pp8_A 136 TREEFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRS-RKSWP-------------------------------------- 176 (315)
T ss_dssp CSTTCCEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CCCCT--------------------------------------
T ss_pred CcCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCC-chhhh--------------------------------------
Confidence 566789999999999999999999999876 2110 00000
Q ss_pred CCCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEee
Q 012946 279 RAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLT 344 (452)
Q Consensus 279 ~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs 344 (452)
++.. +.. . .. +.+.++.+|||+.+.-.....-.+|+++.++.||+|+ ++||++
T Consensus 177 -~~~~--~~~-~----~~-l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~ga----ilIN~a 229 (315)
T 3pp8_A 177 -GVES--YVG-R----EE-LRAFLNQTRVLINLLPNTAQTVGIINSELLDQLPDGA----YVLNLA 229 (315)
T ss_dssp -TCEE--EES-H----HH-HHHHHHTCSEEEECCCCCGGGTTCBSHHHHTTSCTTE----EEEECS
T ss_pred -hhhh--hcc-c----CC-HHHHHhhCCEEEEecCCchhhhhhccHHHHhhCCCCC----EEEECC
Confidence 0000 000 0 11 2667889999999998776666799999999999999 999998
No 47
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=96.80 E-value=0.0018 Score=68.49 Aligned_cols=88 Identities=8% Similarity=0.038 Sum_probs=62.2
Q ss_pred CCCceEEEEcCcHHHHHHHHHHhcCCCEE--eCCCChh-hHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCC
Q 012946 202 ICPLVFVFTGSGHASIAAQELFKLLPHTF--VDPSRLP-ELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSS 278 (452)
Q Consensus 202 i~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~~~l~-~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~ 278 (452)
++-.+|+|+|.|.+|+.+++.|+.+|+.| +++...+ +.... .+..
T Consensus 272 l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~-----------~Ga~--------------------- 319 (494)
T 3ce6_A 272 IGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMM-----------EGFD--------------------- 319 (494)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-----------TTCE---------------------
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----------cCCE---------------------
Confidence 45688999999999999999999999977 3433222 11110 1111
Q ss_pred CCCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEeee
Q 012946 279 RAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLTC 345 (452)
Q Consensus 279 ~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs~ 345 (452)
+ .+ +.+.++.+|+||.+. ..+.+++.+.++.||+|. +|++++-
T Consensus 320 -------~-~~--------l~e~l~~aDvVi~at----gt~~~i~~~~l~~mk~gg----ilvnvG~ 362 (494)
T 3ce6_A 320 -------V-VT--------VEEAIGDADIVVTAT----GNKDIIMLEHIKAMKDHA----ILGNIGH 362 (494)
T ss_dssp -------E-CC--------HHHHGGGCSEEEECS----SSSCSBCHHHHHHSCTTC----EEEECSS
T ss_pred -------E-ec--------HHHHHhCCCEEEECC----CCHHHHHHHHHHhcCCCc----EEEEeCC
Confidence 0 00 133467899999985 355688989999999999 9998874
No 48
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=96.80 E-value=0.0023 Score=65.48 Aligned_cols=89 Identities=16% Similarity=0.183 Sum_probs=65.1
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEE--eCCCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCC
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTF--VDPSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSS 278 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~ 278 (452)
.+...+|.|+|.|++|...+..++.+|.+| .++. ++.. ..+.
T Consensus 113 ~l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~--~~~~----------------------------------~~g~ 156 (380)
T 2o4c_A 113 DLAERTYGVVGAGQVGGRLVEVLRGLGWKVLVCDPP--RQAR----------------------------------EPDG 156 (380)
T ss_dssp CGGGCEEEEECCSHHHHHHHHHHHHTTCEEEEECHH--HHHH----------------------------------STTS
T ss_pred ccCCCEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCC--hhhh----------------------------------ccCc
Confidence 456689999999999999999999999876 2220 0000 0000
Q ss_pred CCCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCC----CCcccCHHHHHHhhcCCCCeEEEEEee
Q 012946 279 RAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQ----FPRLLSTQQLRDLAQKGCPLVGISDLT 344 (452)
Q Consensus 279 ~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~----~P~Lit~e~l~~mk~gs~~l~vIvDvs 344 (452)
.+ .. +.+.++.+|||+.++-.... .-.+|+++.++.||+|+ ++||+|
T Consensus 157 -~~-------------~~-l~ell~~aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk~ga----ilIN~s 207 (380)
T 2o4c_A 157 -EF-------------VS-LERLLAEADVISLHTPLNRDGEHPTRHLLDEPRLAALRPGT----WLVNAS 207 (380)
T ss_dssp -CC-------------CC-HHHHHHHCSEEEECCCCCSSSSSCCTTSBCHHHHHTSCTTE----EEEECS
T ss_pred -cc-------------CC-HHHHHHhCCEEEEeccCccccccchhhhcCHHHHhhCCCCc----EEEECC
Confidence 00 11 25677889999999876644 66899999999999999 999998
No 49
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=96.75 E-value=0.0044 Score=64.53 Aligned_cols=39 Identities=13% Similarity=0.166 Sum_probs=30.6
Q ss_pred hhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEee
Q 012946 299 EKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLT 344 (452)
Q Consensus 299 ~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs 344 (452)
.+.++.+|||||+.-.+ |-++++++++.|.++. +|+|++
T Consensus 258 ~e~l~~aDVlInaT~~~---~G~~~~e~v~~m~~~~----iVfDLy 296 (439)
T 2dvm_A 258 QEALKDADVLISFTRPG---PGVIKPQWIEKMNEDA----IVFPLA 296 (439)
T ss_dssp HHHHTTCSEEEECSCCC---SSSSCHHHHTTSCTTC----EEEECC
T ss_pred HHHhccCCEEEEcCCCc---cCCCChHHHHhcCCCC----EEEECC
Confidence 56678899999997764 1245678999998888 999994
No 50
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=96.75 E-value=0.0026 Score=65.50 Aligned_cols=95 Identities=6% Similarity=-0.048 Sum_probs=69.4
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEE--eCCCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCC
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTF--VDPSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSS 278 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~ 278 (452)
.+.-.++.|+|.|+.|...+..++.+|.+| .++..... .+
T Consensus 142 el~gktlGiIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~-------------------------------------~~- 183 (404)
T 1sc6_A 142 EARGKKLGIIGYGHIGTQLGILAESLGMYVYFYDIENKLP-------------------------------------LG- 183 (404)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCC-------------------------------------CT-
T ss_pred ccCCCEEEEEeECHHHHHHHHHHHHCCCEEEEEcCCchhc-------------------------------------cC-
Confidence 567789999999999999999999999876 22211000 00
Q ss_pred CCCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEeeecCCCCe
Q 012946 279 RAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLTCDMEGSI 351 (452)
Q Consensus 279 ~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs~D~gG~i 351 (452)
+. ++. .. +++.++.+|+|+.+.-.....-.+|.++.++.||+|+ ++||+| .|+-+
T Consensus 184 -~~---~~~-------~~-l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga----~lIN~a--Rg~~v 238 (404)
T 1sc6_A 184 -NA---TQV-------QH-LSDLLNMSDVVSLHVPENPSTKNMMGAKEISLMKPGS----LLINAS--RGTVV 238 (404)
T ss_dssp -TC---EEC-------SC-HHHHHHHCSEEEECCCSSTTTTTCBCHHHHHHSCTTE----EEEECS--CSSSB
T ss_pred -Cc---eec-------CC-HHHHHhcCCEEEEccCCChHHHHHhhHHHHhhcCCCe----EEEECC--CChHH
Confidence 00 000 11 2567888999999988876677799999999999999 999998 45543
No 51
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=96.73 E-value=0.0031 Score=63.29 Aligned_cols=96 Identities=9% Similarity=0.084 Sum_probs=70.3
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEE--eCCCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCC
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTF--VDPSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSS 278 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~ 278 (452)
.+.-.++.|+|.|+.|+..+..++.+|..| .++...+...+. +.
T Consensus 138 ~l~g~tvGIiG~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~------------~~---------------------- 183 (334)
T 3kb6_A 138 ELNRLTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKREDLKEK------------GC---------------------- 183 (334)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHT------------TC----------------------
T ss_pred eecCcEEEEECcchHHHHHHHhhcccCceeeecCCccchhhhhc------------Cc----------------------
Confidence 556789999999999999999999999987 343322222210 00
Q ss_pred CCCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEeeecCCCCe
Q 012946 279 RAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLTCDMEGSI 351 (452)
Q Consensus 279 ~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs~D~gG~i 351 (452)
.| .. +.++++.+|||+.+.-....+-.||+++.++.||+|+ ++|-+| .|+-|
T Consensus 184 -~~-------------~~-l~ell~~sDivslh~Plt~~T~~li~~~~l~~mk~~a----~lIN~a--RG~iV 235 (334)
T 3kb6_A 184 -VY-------------TS-LDELLKESDVISLHVPYTKETHHMINEERISLMKDGV----YLINTA--RGKVV 235 (334)
T ss_dssp -EE-------------CC-HHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTE----EEEECS--CGGGB
T ss_pred -ee-------------cC-HHHHHhhCCEEEEcCCCChhhccCcCHHHHhhcCCCe----EEEecC--ccccc
Confidence 00 11 2567888999999887777778899999999999999 888776 45443
No 52
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=96.71 E-value=0.0019 Score=64.83 Aligned_cols=92 Identities=15% Similarity=0.093 Sum_probs=67.1
Q ss_pred CCCCCceEEEEcCcHHHHHHHHHHhcCCCEE--eCCCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCC
Q 012946 200 SGICPLVFVFTGSGHASIAAQELFKLLPHTF--VDPSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDS 277 (452)
Q Consensus 200 ~~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~ 277 (452)
..+...+|.|+|.|+.|+..+..++.+|++| .++..-+. . +
T Consensus 141 ~~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~-----------------------------------~- 183 (333)
T 1dxy_A 141 KELGQQTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKG-D-----------------------------------H- 183 (333)
T ss_dssp CCGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSS-C-----------------------------------C-
T ss_pred cCCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCcchh-h-----------------------------------H-
Confidence 3667889999999999999999999999876 22210000 0 0
Q ss_pred CCCCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEeee
Q 012946 278 SRAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLTC 345 (452)
Q Consensus 278 ~~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs~ 345 (452)
.+. ++ .. +.+.++.+|+|+.+.-.....-.+|+++.++.||+|+ ++||++-
T Consensus 184 --~~~--~~--------~~-l~ell~~aDvV~~~~P~~~~t~~li~~~~l~~mk~ga----~lIn~sr 234 (333)
T 1dxy_A 184 --PDF--DY--------VS-LEDLFKQSDVIDLHVPGIEQNTHIINEAAFNLMKPGA----IVINTAR 234 (333)
T ss_dssp --TTC--EE--------CC-HHHHHHHCSEEEECCCCCGGGTTSBCHHHHHHSCTTE----EEEECSC
T ss_pred --hcc--cc--------CC-HHHHHhcCCEEEEcCCCchhHHHHhCHHHHhhCCCCc----EEEECCC
Confidence 000 00 01 1566778999999987766667799999999999999 9999984
No 53
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=96.69 E-value=0.0033 Score=62.59 Aligned_cols=94 Identities=6% Similarity=-0.040 Sum_probs=67.9
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEE--eCC-CChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCC
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTF--VDP-SRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDS 277 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~-~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~ 277 (452)
.+...+|.|+|.|+.|...+..++.+|.+| .++ ..-+..... .+..
T Consensus 143 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~~~~-----------~g~~-------------------- 191 (320)
T 1gdh_A 143 KLDNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSSDEAS-----------YQAT-------------------- 191 (320)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHH-----------HTCE--------------------
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcChhhhhh-----------cCcE--------------------
Confidence 567789999999999999999999999977 333 222211100 0100
Q ss_pred CCCCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEeee
Q 012946 278 SRAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLTC 345 (452)
Q Consensus 278 ~~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs~ 345 (452)
+. .. +.+.++.+|+||.+.-.......+|.++.++.||+|. ++||++-
T Consensus 192 --------~~-------~~-l~ell~~aDvVil~~p~~~~t~~~i~~~~l~~mk~ga----ilIn~ar 239 (320)
T 1gdh_A 192 --------FH-------DS-LDSLLSVSQFFSLNAPSTPETRYFFNKATIKSLPQGA----IVVNTAR 239 (320)
T ss_dssp --------EC-------SS-HHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTSCTTE----EEEECSC
T ss_pred --------Ec-------CC-HHHHHhhCCEEEEeccCchHHHhhcCHHHHhhCCCCc----EEEECCC
Confidence 00 01 1456778999999987766677799999999999999 9999985
No 54
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=96.68 E-value=0.0026 Score=65.25 Aligned_cols=123 Identities=9% Similarity=0.096 Sum_probs=74.1
Q ss_pred CCCceEEEEcCcHHHHHHHHHHhcCCC-EE--eCCCC--hhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCC
Q 012946 202 ICPLVFVFTGSGHASIAAQELFKLLPH-TF--VDPSR--LPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKD 276 (452)
Q Consensus 202 i~p~kv~V~G~G~vg~gAi~~a~~LGa-~v--v~~~~--l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~ 276 (452)
++..+|+|+|+|.+|+.++..++.+|+ .| ++... .+++.+. ++.. + +
T Consensus 165 l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~-----------~g~~---~----~---------- 216 (404)
T 1gpj_A 165 LHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARD-----------LGGE---A----V---------- 216 (404)
T ss_dssp CTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHH-----------HTCE---E----C----------
T ss_pred ccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH-----------cCCc---e----e----------
Confidence 356789999999999999999999998 66 33322 2233321 1111 0 0
Q ss_pred CCCCCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHH--hhcCCCCeEEEEEeeecCCCCeeee
Q 012946 277 SSRAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRD--LAQKGCPLVGISDLTCDMEGSIEIL 354 (452)
Q Consensus 277 ~~~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~--mk~gs~~l~vIvDvs~D~gG~iE~~ 354 (452)
.+ ..+ .+.+..+||||+|.- ... .+++.++++. ||....+-.+++|++-
T Consensus 217 ---~~-------------~~l-~~~l~~aDvVi~at~--~~~-~~~~~~~l~~~~lk~r~~~~~v~vdia~--------- 267 (404)
T 1gpj_A 217 ---RF-------------DEL-VDHLARSDVVVSATA--APH-PVIHVDDVREALRKRDRRSPILIIDIAN--------- 267 (404)
T ss_dssp ---CG-------------GGH-HHHHHTCSEEEECCS--SSS-CCBCHHHHHHHHHHCSSCCCEEEEECCS---------
T ss_pred ---cH-------------HhH-HHHhcCCCEEEEccC--CCC-ceecHHHHHHHHHhccCCCCEEEEEccC---------
Confidence 00 011 345568999999963 222 3578889988 4421111237888871
Q ss_pred cccccCCCCEEEeCCCCCCCCCCCCCCCeEEEeeCCcCCcch
Q 012946 355 NQTTTIDSPFFRYDPKNDSYHHDMEGDGIICSVVDNLPTEFP 396 (452)
Q Consensus 355 ~~~Tt~~~P~~~~~~~~~~~~~~~~~~gV~~~~vdnLPs~lp 396 (452)
|-.++.++.. -++|.+|.+|+|...+.
T Consensus 268 --P~~i~~~l~~-------------l~~v~l~d~d~l~~~~~ 294 (404)
T 1gpj_A 268 --PRDVEEGVEN-------------IEDVEVRTIDDLRVIAR 294 (404)
T ss_dssp --SCSBCTTGGG-------------STTEEEEEHHHHHHHHH
T ss_pred --CCCCCccccc-------------cCCeEEEeHhhHHHHHH
Confidence 1122233333 24899999999977554
No 55
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=96.67 E-value=0.0036 Score=62.13 Aligned_cols=88 Identities=14% Similarity=0.108 Sum_probs=65.2
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEEe--CCCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCC
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTFV--DPSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSS 278 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~vv--~~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~ 278 (452)
.+...+|.|+|.|+.|...+..++.+|..|+ ++.. .+ .
T Consensus 141 ~l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~--------------------~~-----------------~--- 180 (311)
T 2cuk_A 141 DLQGLTLGLVGMGRIGQAVAKRALAFGMRVVYHARTP--------------------KP-----------------L--- 180 (311)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC--------------------CS-----------------S---
T ss_pred CCCCCEEEEEEECHHHHHHHHHHHHCCCEEEEECCCC--------------------cc-----------------c---
Confidence 5677899999999999999999999987651 1100 00 0
Q ss_pred CCCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEeee
Q 012946 279 RAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLTC 345 (452)
Q Consensus 279 ~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs~ 345 (452)
.. .+ .. +.+.++.+|+|+.++-.......+|+++.++.||+|+ +++|++-
T Consensus 181 -~~----------~~-~~-l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga----~lin~sr 230 (311)
T 2cuk_A 181 -PY----------PF-LS-LEELLKEADVVSLHTPLTPETHRLLNRERLFAMKRGA----ILLNTAR 230 (311)
T ss_dssp -SS----------CB-CC-HHHHHHHCSEEEECCCCCTTTTTCBCHHHHTTSCTTC----EEEECSC
T ss_pred -cc----------cc-CC-HHHHHhhCCEEEEeCCCChHHHhhcCHHHHhhCCCCc----EEEECCC
Confidence 00 00 11 1567788999999987766667799999999999999 9999985
No 56
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=96.67 E-value=0.0028 Score=64.36 Aligned_cols=94 Identities=13% Similarity=0.049 Sum_probs=68.5
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCE-E--eCCCCh-hhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCC
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHT-F--VDPSRL-PELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKD 276 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~-v--v~~~~l-~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~ 276 (452)
.+...+|.|+|.|+.|+..++.++.+|.. | .++... .+..+. .+. .
T Consensus 161 ~l~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~-----------~g~--------~----------- 210 (364)
T 2j6i_A 161 DIEGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEK-----------VGA--------R----------- 210 (364)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHH-----------TTE--------E-----------
T ss_pred cCCCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHh-----------cCc--------E-----------
Confidence 66788999999999999999999999995 6 333221 111110 010 0
Q ss_pred CCCCCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEeee
Q 012946 277 SSRAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLTC 345 (452)
Q Consensus 277 ~~~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs~ 345 (452)
+. .. +.+.++.+|||+.++-.....-.+|+++.+..||+|. +|||++-
T Consensus 211 ---------~~-------~~-l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga----~lIn~ar 258 (364)
T 2j6i_A 211 ---------RV-------EN-IEELVAQADIVTVNAPLHAGTKGLINKELLSKFKKGA----WLVNTAR 258 (364)
T ss_dssp ---------EC-------SS-HHHHHHTCSEEEECCCCSTTTTTCBCHHHHTTSCTTE----EEEECSC
T ss_pred ---------ec-------CC-HHHHHhcCCEEEECCCCChHHHHHhCHHHHhhCCCCC----EEEECCC
Confidence 00 01 1556778999999987776777899999999999999 9999985
No 57
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=96.66 E-value=0.0045 Score=61.91 Aligned_cols=98 Identities=9% Similarity=0.106 Sum_probs=68.9
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEE--eCCCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCC
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTF--VDPSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSS 278 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~ 278 (452)
.+...+|.|+|.|..|+..+..++.+|..| .++..-.+..+. .+. .
T Consensus 147 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~-----------~g~--------~------------- 194 (334)
T 2dbq_A 147 DVYGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKEEVERE-----------LNA--------E------------- 194 (334)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHH-----------HCC--------E-------------
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcchhhHhh-----------cCc--------c-------------
Confidence 567789999999999999999999999877 333221111100 000 0
Q ss_pred CCCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEeeecCCCCee
Q 012946 279 RAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLTCDMEGSIE 352 (452)
Q Consensus 279 ~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs~D~gG~iE 352 (452)
+ .. +.+.++.+|+||.++-.......++.++.++.|++|. +|+|+| .|+.+.
T Consensus 195 -------~--------~~-l~~~l~~aDvVil~vp~~~~t~~~i~~~~~~~mk~~a----ilIn~s--rg~~v~ 246 (334)
T 2dbq_A 195 -------F--------KP-LEDLLRESDFVVLAVPLTRETYHLINEERLKLMKKTA----ILINIA--RGKVVD 246 (334)
T ss_dssp -------E--------CC-HHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTC----EEEECS--CGGGBC
T ss_pred -------c--------CC-HHHHHhhCCEEEECCCCChHHHHhhCHHHHhcCCCCc----EEEECC--CCcccC
Confidence 0 00 1456778999999987766666789988899999999 999988 454443
No 58
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=96.66 E-value=0.0031 Score=64.74 Aligned_cols=94 Identities=10% Similarity=0.118 Sum_probs=68.7
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEE--eCCCCh-hhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCC
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTF--VDPSRL-PELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDS 277 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~~~l-~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~ 277 (452)
.+.-.+|.|+|.|+.|+..+..++.+|.+| .++... .+..+. .+..
T Consensus 188 ~l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~-----------~G~~-------------------- 236 (393)
T 2nac_A 188 DLEAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKE-----------LNLT-------------------- 236 (393)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHH-----------HTCE--------------------
T ss_pred cCCCCEEEEEeECHHHHHHHHHHHhCCCEEEEEcCCccchhhHhh-----------cCce--------------------
Confidence 567789999999999999999999999977 333221 122110 0100
Q ss_pred CCCCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEeee
Q 012946 278 SRAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLTC 345 (452)
Q Consensus 278 ~~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs~ 345 (452)
+. .. +.+.++.+|+|+.++-.....-.+|+++.++.||+|+ ++||++-
T Consensus 237 --------~~-------~~-l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~ga----ilIN~aR 284 (393)
T 2nac_A 237 --------WH-------AT-REDMYPVCDVVTLNCPLHPETEHMINDETLKLFKRGA----YIVNTAR 284 (393)
T ss_dssp --------EC-------SS-HHHHGGGCSEEEECSCCCTTTTTCBSHHHHTTSCTTE----EEEECSC
T ss_pred --------ec-------CC-HHHHHhcCCEEEEecCCchHHHHHhhHHHHhhCCCCC----EEEECCC
Confidence 00 01 1567788999999988776667899999999999999 9999984
No 59
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=96.64 E-value=0.0028 Score=63.64 Aligned_cols=90 Identities=12% Similarity=0.197 Sum_probs=64.7
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEE--eCCCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCC
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTF--VDPSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSS 278 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~ 278 (452)
.+...+|.|+|.|+.|+..+..++.+|..| .++.. +. ..
T Consensus 161 ~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~-~~------------------------------------~~-- 201 (333)
T 3ba1_A 161 KFSGKRVGIIGLGRIGLAVAERAEAFDCPISYFSRSK-KP------------------------------------NT-- 201 (333)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSC-CT------------------------------------TC--
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCc-hh------------------------------------cc--
Confidence 567789999999999999999999988765 21100 00 00
Q ss_pred CCCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEeee
Q 012946 279 RAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLTC 345 (452)
Q Consensus 279 ~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs~ 345 (452)
++. +. .. +.+.++.+|+||.++-.......+++++.++.||+|. +|||+|.
T Consensus 202 -g~~---~~-------~~-l~ell~~aDvVil~vP~~~~t~~li~~~~l~~mk~ga----ilIn~sr 252 (333)
T 3ba1_A 202 -NYT---YY-------GS-VVELASNSDILVVACPLTPETTHIINREVIDALGPKG----VLINIGR 252 (333)
T ss_dssp -CSE---EE-------SC-HHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHHCTTC----EEEECSC
T ss_pred -Cce---ec-------CC-HHHHHhcCCEEEEecCCChHHHHHhhHHHHhcCCCCC----EEEECCC
Confidence 010 00 11 1556788999999987765566789999999999999 9999874
No 60
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=96.58 E-value=0.003 Score=63.22 Aligned_cols=92 Identities=16% Similarity=0.133 Sum_probs=66.9
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEE--eCCCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCC
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTF--VDPSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSS 278 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~ 278 (452)
.+...+|.|+|.|+.|+..+..++.+|.+| .++..-+... . + .
T Consensus 143 ~l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~~-~-----------~-~---------------------- 187 (333)
T 1j4a_A 143 EVRDQVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPELE-K-----------K-G---------------------- 187 (333)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHH-H-----------T-T----------------------
T ss_pred cCCCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcchhHH-h-----------h-C----------------------
Confidence 567789999999999999999999999876 3322111111 0 0 0
Q ss_pred CCCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEeee
Q 012946 279 RAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLTC 345 (452)
Q Consensus 279 ~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs~ 345 (452)
. +. .. +.+.++.+|+||.+.-.......+|+++.++.||+|+ ++||++-
T Consensus 188 -~-----~~-------~~-l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga----~lIn~ar 236 (333)
T 1j4a_A 188 -Y-----YV-------DS-LDDLYKQADVISLHVPDVPANVHMINDESIAKMKQDV----VIVNVSR 236 (333)
T ss_dssp -C-----BC-------SC-HHHHHHHCSEEEECSCCCGGGTTCBSHHHHHHSCTTE----EEEECSC
T ss_pred -e-----ec-------CC-HHHHHhhCCEEEEcCCCcHHHHHHHhHHHHhhCCCCc----EEEECCC
Confidence 0 00 01 1556778999999987665567799999999999999 9999985
No 61
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=96.36 E-value=0.0091 Score=59.52 Aligned_cols=92 Identities=12% Similarity=0.092 Sum_probs=65.5
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEE--eCC--CChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCC
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTF--VDP--SRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKD 276 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~--~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~ 276 (452)
.+...+|.|+|.|..|+..+..++.+|.+| .++ ...+...+ .+..
T Consensus 152 ~l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~------------~g~~------------------- 200 (330)
T 2gcg_A 152 GLTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAE------------FQAE------------------- 200 (330)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHT------------TTCE-------------------
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcchhHHHh------------cCce-------------------
Confidence 566789999999999999999999999866 222 12222210 0000
Q ss_pred CCCCCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEeee
Q 012946 277 SSRAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLTC 345 (452)
Q Consensus 277 ~~~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs~ 345 (452)
+. . +.+.++.+|+||.++-.+.....++.++.++.|++|. +++|+|.
T Consensus 201 ---------~~--------~-l~e~l~~aDvVi~~vp~~~~t~~~i~~~~~~~mk~ga----ilIn~sr 247 (330)
T 2gcg_A 201 ---------FV--------S-TPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETA----VFINISR 247 (330)
T ss_dssp ---------EC--------C-HHHHHHHCSEEEECCCCCTTTTTCBSHHHHHHSCTTC----EEEECSC
T ss_pred ---------eC--------C-HHHHHhhCCEEEEeCCCChHHHHhhCHHHHhcCCCCc----EEEECCC
Confidence 00 0 1456678999999987765566788889999999999 9998874
No 62
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=96.31 E-value=0.0077 Score=60.62 Aligned_cols=93 Identities=11% Similarity=-0.022 Sum_probs=66.4
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHh-cCCCEE--eCCCC--hhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccC
Q 012946 201 GICPLVFVFTGSGHASIAAQELFK-LLPHTF--VDPSR--LPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPK 275 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~-~LGa~v--v~~~~--l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~ 275 (452)
.+...+|.|+|.|+.|+..+..++ .+|.+| .++.. .+...+ .+..
T Consensus 160 ~l~g~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~------------~g~~------------------ 209 (348)
T 2w2k_A 160 NPRGHVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKA------------LGAE------------------ 209 (348)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHH------------HTCE------------------
T ss_pred CCCCCEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhh------------cCcE------------------
Confidence 567789999999999999999999 999877 33321 111110 0100
Q ss_pred CCCCCCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEeee
Q 012946 276 DSSRAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLTC 345 (452)
Q Consensus 276 ~~~~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs~ 345 (452)
+. .. +.+.++.+|+||.++-.....-.+|.++.++.||+|. +|+|+|.
T Consensus 210 ----------~~-------~~-l~ell~~aDvVil~vp~~~~t~~li~~~~l~~mk~ga----ilin~sr 257 (348)
T 2w2k_A 210 ----------RV-------DS-LEELARRSDCVSVSVPYMKLTHHLIDEAFFAAMKPGS----RIVNTAR 257 (348)
T ss_dssp ----------EC-------SS-HHHHHHHCSEEEECCCCSGGGTTCBCHHHHHHSCTTE----EEEECSC
T ss_pred ----------Ee-------CC-HHHHhccCCEEEEeCCCChHHHHHhhHHHHhcCCCCC----EEEECCC
Confidence 00 01 1456778999999987765566789999999999999 9998874
No 63
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=96.26 E-value=0.0038 Score=65.10 Aligned_cols=108 Identities=13% Similarity=0.163 Sum_probs=65.7
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEEeCCCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccc--cCC--
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTFVDPSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVE--PKD-- 276 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~vv~~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~--~~~-- 276 (452)
.+.-.+|||.|+|.+|.|..+.+..+|+.. ++ |+ .+++..... +.+
T Consensus 216 ~l~d~riV~~GAGaAGigia~ll~~~G~~~------~~----------------------i~--l~D~~Gli~~~R~~l~ 265 (487)
T 3nv9_A 216 DIHECRMVFIGAGSSNTTCLRLIVTAGADP------KK----------------------IV--MFDSKGSLHNGREDIK 265 (487)
T ss_dssp CGGGCCEEEECCSHHHHHHHHHHHHTTCCG------GG----------------------EE--EEETTEECCTTCHHHH
T ss_pred ChhhcEEEEECCCHHHHHHHHHHHHcCCCc------cc----------------------EE--EEeccccccCCcchhh
Confidence 667789999999999999999999888621 00 11 111111100 000
Q ss_pred CCCCCcc-cccc--cCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEeeecC
Q 012946 277 SSRAFDK-NDYY--EHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLTCDM 347 (452)
Q Consensus 277 ~~~~~~~-~~~~--~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs~D~ 347 (452)
....+.. .+|- .+++.. .. +.+.++.+||+|.+..+ .|-++|+|+|+.|.+.. +|.-+|--.
T Consensus 266 ~~~~~~~k~~~A~~~n~~~~-~~-L~eav~~adVlIG~S~~---~pg~ft~e~V~~Ma~~P----IIFaLSNPt 330 (487)
T 3nv9_A 266 KDTRFYRKWEICETTNPSKF-GS-IAEACVGADVLISLSTP---GPGVVKAEWIKSMGEKP----IVFCCANPV 330 (487)
T ss_dssp HCGGGHHHHHHHHHSCTTCC-CS-HHHHHTTCSEEEECCCS---SCCCCCHHHHHTSCSSC----EEEECCSSS
T ss_pred hhcccHHHHHHHHhcccccC-CC-HHHHHhcCCEEEEeccc---CCCCCCHHHHHhhcCCC----EEEECCCCC
Confidence 0000111 1110 122211 23 37888899999998765 27799999999997777 888887543
No 64
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=96.23 E-value=0.011 Score=57.14 Aligned_cols=30 Identities=17% Similarity=0.030 Sum_probs=26.3
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
.+...+|+|+|+|.+|...+..+.+.|+.|
T Consensus 126 ~~~~~~v~iiGaG~~g~aia~~L~~~g~~V 155 (275)
T 2hk9_A 126 EVKEKSILVLGAGGASRAVIYALVKEGAKV 155 (275)
T ss_dssp TGGGSEEEEECCSHHHHHHHHHHHHHTCEE
T ss_pred CcCCCEEEEECchHHHHHHHHHHHHcCCEE
Confidence 345689999999999999999999999866
No 65
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=96.18 E-value=0.0095 Score=63.28 Aligned_cols=98 Identities=12% Similarity=0.052 Sum_probs=70.6
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEE--eCCCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCC
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTF--VDPSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSS 278 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~ 278 (452)
.+...+|.|+|.|+.|...+..++++|..| .++..-.+..+. .+..
T Consensus 139 ~l~g~~vgIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~a~~-----------~g~~--------------------- 186 (529)
T 1ygy_A 139 EIFGKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQ-----------LGIE--------------------- 186 (529)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCHHHHHH-----------HTCE---------------------
T ss_pred ccCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEECCCCChhHHHh-----------cCcE---------------------
Confidence 567789999999999999999999999977 343221111110 0100
Q ss_pred CCCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEeeecCCCCee
Q 012946 279 RAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLTCDMEGSIE 352 (452)
Q Consensus 279 ~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs~D~gG~iE 352 (452)
+. . +.+.++.+|+|+.+.-.......++.++.+..||+|. +|+|++ .|+.+.
T Consensus 187 -------~~-~--------l~e~~~~aDvV~l~~P~~~~t~~~i~~~~~~~~k~g~----ilin~a--rg~iv~ 238 (529)
T 1ygy_A 187 -------LL-S--------LDDLLARADFISVHLPKTPETAGLIDKEALAKTKPGV----IIVNAA--RGGLVD 238 (529)
T ss_dssp -------EC-C--------HHHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTE----EEEECS--CTTSBC
T ss_pred -------Ec-C--------HHHHHhcCCEEEECCCCchHHHHHhCHHHHhCCCCCC----EEEECC--CCchhh
Confidence 00 0 1456778999999998776677899998999999999 999998 665543
No 66
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=96.14 E-value=0.0071 Score=63.74 Aligned_cols=88 Identities=10% Similarity=0.113 Sum_probs=61.9
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEE--eCCCCh--hhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCC
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTF--VDPSRL--PELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKD 276 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~~~l--~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~ 276 (452)
.+.-.+|+|+|+|.+|++.+..|+++|+.| +++... .+..+ .+.. +.
T Consensus 262 ~L~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~------------~g~d--------v~--------- 312 (488)
T 3ond_A 262 MIAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATM------------EGLQ--------VL--------- 312 (488)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH------------TTCE--------EC---------
T ss_pred cccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH------------hCCc--------cC---------
Confidence 456789999999999999999999999987 333222 22210 0100 00
Q ss_pred CCCCCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEeee
Q 012946 277 SSRAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLTC 345 (452)
Q Consensus 277 ~~~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs~ 345 (452)
. ..+.+..+|++|.+. ..+.+|+.+.++.|+++. +|++++-
T Consensus 313 ------------~--------lee~~~~aDvVi~at----G~~~vl~~e~l~~mk~ga----iVvNaG~ 353 (488)
T 3ond_A 313 ------------T--------LEDVVSEADIFVTTT----GNKDIIMLDHMKKMKNNA----IVCNIGH 353 (488)
T ss_dssp ------------C--------GGGTTTTCSEEEECS----SCSCSBCHHHHTTSCTTE----EEEESSS
T ss_pred ------------C--------HHHHHHhcCEEEeCC----CChhhhhHHHHHhcCCCe----EEEEcCC
Confidence 0 134566789999763 456789999999999999 8988874
No 67
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=96.11 E-value=0.0062 Score=59.58 Aligned_cols=30 Identities=23% Similarity=0.268 Sum_probs=26.2
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCC-EE
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPH-TF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa-~v 230 (452)
++...+++|+|+|.+|+.++..+.++|+ .+
T Consensus 114 ~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v 144 (277)
T 3don_A 114 GIEDAYILILGAGGASKGIANELYKIVRPTL 144 (277)
T ss_dssp TGGGCCEEEECCSHHHHHHHHHHHTTCCSCC
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCCEE
Confidence 4456789999999999999999999998 44
No 68
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=95.93 E-value=0.024 Score=55.21 Aligned_cols=89 Identities=13% Similarity=-0.029 Sum_probs=58.0
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE--eC--CCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCCC
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF--VD--PSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSSR 279 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~--~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~~ 279 (452)
..+++|+|+|.+|+.++..+.++|+.+ ++ +++.+++. .. +. ....
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~-----------~~--------~~~~----------- 166 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RL-----------GC--------DCFM----------- 166 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HH-----------TC--------EEES-----------
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HC-----------CC--------eEec-----------
Confidence 478999999999999999999999866 22 33344444 10 10 0000
Q ss_pred CCcccccccCcCCcCcchHhhhcCCCcEEEeccccCC-CCCcccCHHHHH-HhhcCCCCeEEEEEeeecC
Q 012946 280 AFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEK-QFPRLLSTQQLR-DLAQKGCPLVGISDLTCDM 347 (452)
Q Consensus 280 ~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~-~~P~Lit~e~l~-~mk~gs~~l~vIvDvs~D~ 347 (452)
+ .+ ++.+||||||.-..- ..| .+..+.+. .++++. +++|++-.+
T Consensus 167 -~-----------------~~-l~~~DiVInaTp~Gm~~~~-~l~~~~l~~~l~~~~----~v~D~vY~P 212 (269)
T 3phh_A 167 -E-----------------PP-KSAFDLIINATSASLHNEL-PLNKEVLKGYFKEGK----LAYDLAYGF 212 (269)
T ss_dssp -S-----------------CC-SSCCSEEEECCTTCCCCSC-SSCHHHHHHHHHHCS----EEEESCCSS
T ss_pred -H-----------------HH-hccCCEEEEcccCCCCCCC-CCChHHHHhhCCCCC----EEEEeCCCC
Confidence 0 11 126899999987752 223 36777555 468888 999998643
No 69
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=95.90 E-value=0.0035 Score=54.31 Aligned_cols=27 Identities=11% Similarity=0.132 Sum_probs=24.4
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
..+|+|+|+|..|...+..+...|+.+
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v 47 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKV 47 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEE
Confidence 578999999999999999999899865
No 70
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.89 E-value=0.021 Score=46.54 Aligned_cols=27 Identities=15% Similarity=0.172 Sum_probs=24.1
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCC-CEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLP-HTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LG-a~v 230 (452)
..+|+|+|+|..|+..+..+.+.| .+|
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v 32 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSV 32 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEE
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceE
Confidence 368999999999999999999999 655
No 71
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=95.83 E-value=0.021 Score=54.94 Aligned_cols=27 Identities=19% Similarity=0.097 Sum_probs=24.2
Q ss_pred CCceEEEEcCcHHHHHHHHHHhcCCC-EE
Q 012946 203 CPLVFVFTGSGHASIAAQELFKLLPH-TF 230 (452)
Q Consensus 203 ~p~kv~V~G~G~vg~gAi~~a~~LGa-~v 230 (452)
.. +++|+|+|.+|+.++..+.++|+ .+
T Consensus 108 ~~-~vliiGaGg~a~ai~~~L~~~G~~~I 135 (253)
T 3u62_A 108 KE-PVVVVGAGGAARAVIYALLQMGVKDI 135 (253)
T ss_dssp CS-SEEEECCSHHHHHHHHHHHHTTCCCE
T ss_pred CC-eEEEECcHHHHHHHHHHHHHcCCCEE
Confidence 45 89999999999999999999998 44
No 72
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=95.81 E-value=0.0043 Score=60.78 Aligned_cols=30 Identities=13% Similarity=-0.053 Sum_probs=26.6
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCC-EE
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPH-TF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa-~v 230 (452)
.+...+++|+|+|-+|+.++..+.++|+ .+
T Consensus 124 ~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v 154 (283)
T 3jyo_A 124 NAKLDSVVQVGAGGVGNAVAYALVTHGVQKL 154 (283)
T ss_dssp TCCCSEEEEECCSHHHHHHHHHHHHTTCSEE
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCCEE
Confidence 4567899999999999999999999999 45
No 73
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=95.75 E-value=0.013 Score=57.46 Aligned_cols=30 Identities=7% Similarity=-0.042 Sum_probs=26.4
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCC-EE
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPH-TF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa-~v 230 (452)
.+...+|+|+|+|.+|+.++..+.++|+ .|
T Consensus 138 ~l~~~~vlVlGaGg~g~aia~~L~~~G~~~V 168 (297)
T 2egg_A 138 TLDGKRILVIGAGGGARGIYFSLLSTAAERI 168 (297)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTCSEE
T ss_pred CCCCCEEEEECcHHHHHHHHHHHHHCCCCEE
Confidence 3456789999999999999999999998 65
No 74
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=95.67 E-value=0.0077 Score=60.01 Aligned_cols=30 Identities=20% Similarity=0.058 Sum_probs=27.0
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCC-EE
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPH-TF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa-~v 230 (452)
++...+++|+|+|-+|+.++..+.++|+ .|
T Consensus 151 ~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V 181 (315)
T 3tnl_A 151 DIIGKKMTICGAGGAATAICIQAALDGVKEI 181 (315)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCSEE
T ss_pred CccCCEEEEECCChHHHHHHHHHHHCCCCEE
Confidence 5567899999999999999999999999 55
No 75
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=95.59 E-value=0.027 Score=55.19 Aligned_cols=30 Identities=27% Similarity=0.150 Sum_probs=26.7
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCC-EE
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPH-TF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa-~v 230 (452)
.+...+++|+|+|.+|+.++..+.++|+ .+
T Consensus 119 ~~~~k~vlvlGaGGaaraia~~L~~~G~~~v 149 (282)
T 3fbt_A 119 EIKNNICVVLGSGGAARAVLQYLKDNFAKDI 149 (282)
T ss_dssp CCTTSEEEEECSSTTHHHHHHHHHHTTCSEE
T ss_pred CccCCEEEEECCcHHHHHHHHHHHHcCCCEE
Confidence 4567899999999999999999999998 55
No 76
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=95.58 E-value=0.04 Score=55.81 Aligned_cols=30 Identities=13% Similarity=0.086 Sum_probs=27.9
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
.+.-.+|+|+|.|++|+.+++.++++|++|
T Consensus 172 ~L~GktV~I~G~GnVG~~~A~~l~~~GakV 201 (355)
T 1c1d_A 172 SLDGLTVLVQGLGAVGGSLASLAAEAGAQL 201 (355)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHCCCEE
Confidence 466789999999999999999999999987
No 77
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=95.56 E-value=0.01 Score=58.10 Aligned_cols=30 Identities=10% Similarity=0.051 Sum_probs=26.6
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCC-EE
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPH-TF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa-~v 230 (452)
++...+++|+|+|.+|+..+..+.++|+ .|
T Consensus 123 ~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v 153 (281)
T 3o8q_A 123 LLKGATILLIGAGGAARGVLKPLLDQQPASI 153 (281)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTCCSEE
T ss_pred CccCCEEEEECchHHHHHHHHHHHhcCCCeE
Confidence 4567899999999999999999999997 55
No 78
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=95.47 E-value=0.033 Score=54.15 Aligned_cols=99 Identities=14% Similarity=0.028 Sum_probs=61.5
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCC-EE--eCC--CChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccC
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPH-TF--VDP--SRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPK 275 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa-~v--v~~--~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~ 275 (452)
.....+++|+|+|-++++++..+..+|+ ++ ++. ++.+++.+.. +..
T Consensus 122 ~~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt~~ra~~la~~~-----------~~~------------------ 172 (269)
T 3tum_A 122 EPAGKRALVIGCGGVGSAIAYALAEAGIASITLCDPSTARMGAVCELL-----------GNG------------------ 172 (269)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHH-----------HHH------------------
T ss_pred CcccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHHH-----------hcc------------------
Confidence 3456789999999999999999999998 33 332 2234444221 100
Q ss_pred CCCCCCcccccccCcCCcCcchHhhhcCCCcEEEeccccC-C-CCCcccCHHHHHHhhcCCCCeEEEEEeeec
Q 012946 276 DSSRAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWE-K-QFPRLLSTQQLRDLAQKGCPLVGISDLTCD 346 (452)
Q Consensus 276 ~~~~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~-~-~~P~Lit~e~l~~mk~gs~~l~vIvDvs~D 346 (452)
|........ ...+.++|+||||.-.. . ..+.=++.+.+..++++. ++.|+.-.
T Consensus 173 -----~~~~~~~~~---------~~~~~~~dliiNaTp~Gm~~~~~~p~~~~~~~~l~~~~----~v~D~vY~ 227 (269)
T 3tum_A 173 -----FPGLTVSTQ---------FSGLEDFDLVANASPVGMGTRAELPLSAALLATLQPDT----LVADVVTS 227 (269)
T ss_dssp -----CTTCEEESC---------CSCSTTCSEEEECSSTTCSTTCCCSSCHHHHHTCCTTS----EEEECCCS
T ss_pred -----CCcceehhh---------hhhhhcccccccCCccccCCCCCCCCChHHHhccCCCc----EEEEEccC
Confidence 000000000 12245679999998775 2 333336778888888888 99998754
No 79
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=95.41 E-value=0.041 Score=54.97 Aligned_cols=96 Identities=8% Similarity=0.080 Sum_probs=65.3
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEE--eCCCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCC
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTF--VDPSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSS 278 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~ 278 (452)
.+...+|.|+|.|..|...+..++.+|.+| .++..-.+.... .+ +.
T Consensus 143 ~l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~~~~~~~~-----------~g--------~~------------- 190 (333)
T 2d0i_A 143 SLYGKKVGILGMGAIGKAIARRLIPFGVKLYYWSRHRKVNVEKE-----------LK--------AR------------- 190 (333)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCHHHHHH-----------HT--------EE-------------
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcchhhhhh-----------cC--------ce-------------
Confidence 567789999999999999999999999877 333221211100 00 00
Q ss_pred CCCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEeeecCCCCe
Q 012946 279 RAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLTCDMEGSI 351 (452)
Q Consensus 279 ~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs~D~gG~i 351 (452)
+ .. +.+.++.+|+||.++-.......++.++.++.|++| +++|+| .|+-+
T Consensus 191 -------~--------~~-l~e~l~~aDiVil~vp~~~~t~~~i~~~~~~~mk~g-----ilin~s--rg~~v 240 (333)
T 2d0i_A 191 -------Y--------MD-IDELLEKSDIVILALPLTRDTYHIINEERVKKLEGK-----YLVNIG--RGALV 240 (333)
T ss_dssp -------E--------CC-HHHHHHHCSEEEECCCCCTTTTTSBCHHHHHHTBTC-----EEEECS--CGGGB
T ss_pred -------e--------cC-HHHHHhhCCEEEEcCCCChHHHHHhCHHHHhhCCCC-----EEEECC--CCccc
Confidence 0 00 145567899999998877667779998888889875 468887 44433
No 80
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=95.33 E-value=0.011 Score=58.83 Aligned_cols=30 Identities=17% Similarity=0.131 Sum_probs=26.8
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCC-EE
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPH-TF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa-~v 230 (452)
++...+++|+|+|-+|+.++..+.++|+ .+
T Consensus 145 ~l~gk~~lVlGAGGaaraia~~L~~~G~~~v 175 (312)
T 3t4e_A 145 DMRGKTMVLLGAGGAATAIGAQAAIEGIKEI 175 (312)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEE
T ss_pred CcCCCEEEEECcCHHHHHHHHHHHHcCCCEE
Confidence 5567899999999999999999999999 44
No 81
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=95.15 E-value=0.034 Score=53.06 Aligned_cols=29 Identities=14% Similarity=0.014 Sum_probs=25.0
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
.+.. +|+|+|+|.+|...+..+...|+.+
T Consensus 114 ~l~~-~v~iiG~G~~g~~~a~~l~~~g~~v 142 (263)
T 2d5c_A 114 PLKG-PALVLGAGGAGRAVAFALREAGLEV 142 (263)
T ss_dssp CCCS-CEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred CCCC-eEEEECCcHHHHHHHHHHHHCCCEE
Confidence 3456 8999999999999999999999855
No 82
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=95.14 E-value=0.032 Score=54.24 Aligned_cols=30 Identities=17% Similarity=0.068 Sum_probs=26.6
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCC-EE
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPH-TF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa-~v 230 (452)
.+...+++|+|+|.+|+.++..+.++|+ .+
T Consensus 117 ~l~~k~~lvlGaGg~~~aia~~L~~~G~~~v 147 (272)
T 3pwz_A 117 PLRNRRVLLLGAGGAVRGALLPFLQAGPSEL 147 (272)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTCCSEE
T ss_pred CccCCEEEEECccHHHHHHHHHHHHcCCCEE
Confidence 4567899999999999999999999997 55
No 83
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=94.88 E-value=0.059 Score=51.88 Aligned_cols=30 Identities=20% Similarity=0.048 Sum_probs=26.7
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
.+...+|+|+|+|.+|+.++..+.+.|+.|
T Consensus 116 ~l~~k~vlViGaGg~g~a~a~~L~~~G~~V 145 (271)
T 1nyt_A 116 IRPGLRILLIGAGGASRGVLLPLLSLDCAV 145 (271)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHcCCEE
Confidence 345678999999999999999999999977
No 84
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=94.69 E-value=0.1 Score=52.92 Aligned_cols=30 Identities=13% Similarity=0.109 Sum_probs=27.6
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
++.-.+|+|+|.|++|..+++.+.++|++|
T Consensus 170 ~L~GktV~V~G~G~VG~~~A~~L~~~GakV 199 (364)
T 1leh_A 170 SLEGLAVSVQGLGNVAKALCKKLNTEGAKL 199 (364)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred CCCcCEEEEECchHHHHHHHHHHHHCCCEE
Confidence 456789999999999999999999999987
No 85
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=94.62 E-value=0.05 Score=52.48 Aligned_cols=30 Identities=10% Similarity=-0.048 Sum_probs=26.7
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
.+...+|+|+|+|.+|+.++..+.+.|+.|
T Consensus 116 ~~~~~~vlvlGaGg~g~a~a~~L~~~G~~v 145 (272)
T 1p77_A 116 LRPNQHVLILGAGGATKGVLLPLLQAQQNI 145 (272)
T ss_dssp CCTTCEEEEECCSHHHHTTHHHHHHTTCEE
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCEE
Confidence 445689999999999999999999999876
No 86
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=94.51 E-value=0.12 Score=55.00 Aligned_cols=190 Identities=18% Similarity=0.253 Sum_probs=101.6
Q ss_pred cEEEEecCCCcccccCCCceEEEecccCCCCCC--HHHHHHHHH------cCCeEEEeecccccCC--------Cccccc
Q 012946 74 GLILGIKKPKLEMILPDRAYAFFSHTHKAQPEN--MALLDKILA------QRVSLFDYELVEGNQG--------KRRLIA 137 (452)
Q Consensus 74 diIl~Vkep~~~~l~~~~~~~~fs~~~~~q~~n--~~ll~~l~~------k~it~i~~E~i~~~~g--------~~~L~s 137 (452)
.|.|.+.- .-++++... +++|+=|+--.+. -++++.+++ ..-.+|-+|.+...+- .+ .--
T Consensus 180 PI~lDvgT-nn~~LL~DP--lYlG~r~~Rv~g~eYd~fvdefv~av~~~fG~~~~I~~EDf~~~~af~il~ryr~~-ipv 255 (564)
T 1pj3_A 180 PVCIDVGT-DNIALLKDP--FYMGLYQKRDRTQQYDDLIDEFMKAITDRYGRNTLIQFEDFGNHNAFRFLRKYREK-YCT 255 (564)
T ss_dssp EEEEESCC-CCTTGGGCT--TCCSCSSCCCCSHHHHHHHHHHHHHHHHHHCTTCEEEECSCCHHHHHHHHHHHTTT-SSE
T ss_pred eeEeecCc-CchhhccCC--cccCcCCCCCchhhHHHHHHHHHHHHHHHcCCCcEEeehhcCCccHHHHHHHhccC-CCE
Confidence 56666531 122333333 5556666654322 233443332 2556799999853211 12 222
Q ss_pred h-hHHHHHHHHHHHHHHHHHHHhhcCCCCCcccccccccCccHHHHHHHHHHhhHHHHhcCCCCCCCCceEEEEcCcHHH
Q 012946 138 F-GKFAGRAAIIDLLKGLGQRYLNLGYSTPFLTLGAAYMYPSLAAAKAAIISVGEEIATEGLPSGICPLVFVFTGSGHAS 216 (452)
Q Consensus 138 ~-~~~AG~~avi~al~~~g~~~l~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~G~~~~i~p~kv~V~G~G~vg 216 (452)
| --+-|.++|. ++. ++.|++-+| +.+.-.+|||.|+|-+|
T Consensus 256 FnDDiqGTa~V~-----lAg-------------------------llnAlki~g---------k~l~d~riv~~GAGaAg 296 (564)
T 1pj3_A 256 FNDDIQGTAAVA-----LAG-------------------------LLAAQKVIS---------KPISEHKILFLGAGEAA 296 (564)
T ss_dssp EEHHHHHHHHHH-----HHH-------------------------HHHHHHHHC---------CCGGGCCEEEECCSHHH
T ss_pred eCCCCchHHHHH-----HHH-------------------------HHHHHHHhC---------CcHhHcEEEEeCCCHHH
Confidence 3 3577877776 332 334445443 36678899999999999
Q ss_pred HHHHHHHhc----CCCEEeCCCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccC------CCCCCCccccc
Q 012946 217 IAAQELFKL----LPHTFVDPSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPK------DSSRAFDKNDY 286 (452)
Q Consensus 217 ~gAi~~a~~----LGa~vv~~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~------~~~~~~~~~~~ 286 (452)
.|.++.+.. .|... ++-. ++ |+ .+++..+..+. +....|++..
T Consensus 297 igia~ll~~~m~~~Gl~~------eeA~---------------~~---i~--~~D~~Gli~~~r~~~l~~~k~~~A~~~- 349 (564)
T 1pj3_A 297 LGIANLIVMSMVENGLSE------QEAQ---------------KK---IW--MFDKYGLLVKGRKAKIDSYQEPFTHSA- 349 (564)
T ss_dssp HHHHHHHHHHHHHTTCCH------HHHH---------------HT---EE--EEETTEECBTTCSSCCCTTTGGGCBCC-
T ss_pred HHHHHHHHHHHHHcCCCh------HHhh---------------Cc---EE--EEeCCCeEECCCcccchHHHHHHHHhc-
Confidence 999988875 56321 0111 11 22 12222221110 1112333321
Q ss_pred ccCcCCcCcchHhhhcC--CCcEEEeccccCCCCCcccCHHHHHHhh---cCCCCeEEEEEeee
Q 012946 287 YEHPEQYNPIFHEKIAP--YASAIINCIYWEKQFPRLLSTQQLRDLA---QKGCPLVGISDLTC 345 (452)
Q Consensus 287 ~~~~e~y~~~f~~~~~~--~~DIvIn~a~~~~~~P~Lit~e~l~~mk---~gs~~l~vIvDvs~ 345 (452)
++.. ... +.+.++ ..||+|.+.- .|-++|+|+|+.|. +.. +|.=+|-
T Consensus 350 --~~~~-~~~-L~eav~~vkp~vlIG~S~----~~g~ft~evv~~Ma~~~~~P----IIFaLSN 401 (564)
T 1pj3_A 350 --PESI-PDT-FEDAVNILKPSTIIGVAG----AGRLFTPDVIRAMASINERP----VIFALSN 401 (564)
T ss_dssp --CSSC-CSS-HHHHHHHHCCSEEEECCC----SSCCSCHHHHHHHHHHCSSC----EEEECCS
T ss_pred --Cccc-cCC-HHHHHhhcCCCEEEEeCC----CCCCCCHHHHHHHHhcCCCC----EEEECCC
Confidence 1110 022 367777 5999999843 45799999999996 455 6776764
No 87
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=94.49 E-value=0.044 Score=58.19 Aligned_cols=104 Identities=19% Similarity=0.288 Sum_probs=61.1
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhc----CCCEEeCCCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccC-
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKL----LPHTFVDPSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPK- 275 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~----LGa~vv~~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~- 275 (452)
.+.-.+|||.|+|-+|.|.++.+.. .|... ++-. ++ |+ .+++..+....
T Consensus 279 ~l~d~riv~~GAGaAg~gia~ll~~~~~~~G~~~------eeA~---------------~~---i~--~~D~~Gli~~~r 332 (555)
T 1gq2_A 279 RLSDHTVLFQGAGEAALGIANLIVMAMQKEGVSK------EEAI---------------KR---IW--MVDSKGLIVKGR 332 (555)
T ss_dssp CGGGCCEEEECCSHHHHHHHHHHHHHHHHHTCCH------HHHH---------------TT---EE--EEETTEECBTTC
T ss_pred ChhhcEEEEECCCHHHHHHHHHHHHHHHHcCCCh------HHHh---------------Cc---EE--EEECCCeeeCCC
Confidence 6677899999999999999888876 45310 0000 11 22 22332221110
Q ss_pred ----CCCCCCcccccccCcCCcCcchHhhhcC--CCcEEEeccccCCCCCcccCHHHHHHhh---cCCCCeEEEEEeee
Q 012946 276 ----DSSRAFDKNDYYEHPEQYNPIFHEKIAP--YASAIINCIYWEKQFPRLLSTQQLRDLA---QKGCPLVGISDLTC 345 (452)
Q Consensus 276 ----~~~~~~~~~~~~~~~e~y~~~f~~~~~~--~~DIvIn~a~~~~~~P~Lit~e~l~~mk---~gs~~l~vIvDvs~ 345 (452)
+....|++. .+.. .. +.+.++ ..||+|.+. ..|-++|+|+|+.|. +.. +|.=+|-
T Consensus 333 ~~l~~~k~~~A~~-----~~~~-~~-L~eav~~vkp~vlIG~S----~~~g~ft~evv~~Ma~~~~~P----IIFaLSN 396 (555)
T 1gq2_A 333 ASLTPEKEHFAHE-----HCEM-KN-LEDIVKDIKPTVLIGVA----AIGGAFTQQILQDMAAFNKRP----IIFALSN 396 (555)
T ss_dssp SSCCTTGGGGCBS-----CCCC-CC-HHHHHHHHCCSEEEECS----CCTTCSCHHHHHHHHHHCSSC----EEEECCS
T ss_pred CCchHHHHHHHhh-----cCCC-CC-HHHHHhhcCCCEEEEec----CCCCCCCHHHHHHHHhcCCCC----EEEECCC
Confidence 011233332 1111 23 366776 489999984 346799999999996 455 7776765
No 88
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=94.36 E-value=0.1 Score=55.80 Aligned_cols=104 Identities=17% Similarity=0.221 Sum_probs=61.5
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhc----CCCEEeCCCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccC-
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKL----LPHTFVDPSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPK- 275 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~----LGa~vv~~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~- 275 (452)
.+.-.||||.|+|-||.|.++.+.. .|... ++-. ++ |+ .+++..+....
T Consensus 317 ~l~d~riv~~GAGaAgigia~ll~~~m~~~Gl~~------eeA~---------------~~---i~--~vD~~Gli~~~r 370 (605)
T 1o0s_A 317 LVSQEKYLFFGAGAASTGIAEMIVHQMQNEGISK------EEAC---------------NR---IY--LMDIDGLVTKNR 370 (605)
T ss_dssp CGGGCCEEEECCSHHHHHHHHHHHHHHHTTTCCH------HHHH---------------HT---EE--EEETTEECBTTC
T ss_pred ChhhcEEEEECCCHHHHHHHHHHHHHHHHcCCCh------hhhh---------------Ce---EE--EEECCCceeCCC
Confidence 6778899999999999999988877 56421 0000 11 22 12222211110
Q ss_pred ----CCCCCCcccccccCcCCcCcchHhhhcC--CCcEEEeccccCCCCCcccCHHHHHHhh---cCCCCeEEEEEeee
Q 012946 276 ----DSSRAFDKNDYYEHPEQYNPIFHEKIAP--YASAIINCIYWEKQFPRLLSTQQLRDLA---QKGCPLVGISDLTC 345 (452)
Q Consensus 276 ----~~~~~~~~~~~~~~~e~y~~~f~~~~~~--~~DIvIn~a~~~~~~P~Lit~e~l~~mk---~gs~~l~vIvDvs~ 345 (452)
+....|++.. +.. .. +.+.++ ..||+|.+.- .|-++|+|+|+.|. +.. +|.=+|-
T Consensus 371 ~~l~~~k~~~A~~~-----~~~-~~-L~eav~~vkpdVlIG~S~----~~g~ft~evv~~Ma~~~~~P----IIFaLSN 434 (605)
T 1o0s_A 371 KEMNPRHVQFAKDM-----PET-TS-ILEVIRAARPGALIGAST----VRGAFNEEVIRAMAEINERP----IIFALSN 434 (605)
T ss_dssp SSCCGGGTTTCBSS-----CCC-CC-HHHHHHHHCCSEEEECSS----CTTCSCHHHHHHHHHHCSSC----EEEECCS
T ss_pred CCchHHHHHHHhhc-----CCC-CC-HHHHHhhcCCCEEEEecC----CCCCCCHHHHHHHHhcCCCC----EEEECCC
Confidence 0112344321 111 23 366776 4899999843 45799999999995 455 7776765
No 89
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=94.31 E-value=0.068 Score=51.82 Aligned_cols=29 Identities=17% Similarity=0.043 Sum_probs=25.6
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
.+...+++|+|+|.+|+..+..+.+.| .|
T Consensus 125 ~l~~k~vlV~GaGgiG~aia~~L~~~G-~V 153 (287)
T 1nvt_A 125 RVKDKNIVIYGAGGAARAVAFELAKDN-NI 153 (287)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHTSSS-EE
T ss_pred CcCCCEEEEECchHHHHHHHHHHHHCC-CE
Confidence 345678999999999999999999999 87
No 90
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=94.30 E-value=0.1 Score=51.66 Aligned_cols=78 Identities=13% Similarity=0.089 Sum_probs=56.9
Q ss_pred CCCCceEEEEcCc-HHHHHHHHHHhcCCCEEeCCCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCCC
Q 012946 201 GICPLVFVFTGSG-HASIAAQELFKLLPHTFVDPSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSSR 279 (452)
Q Consensus 201 ~i~p~kv~V~G~G-~vg~gAi~~a~~LGa~vv~~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~~ 279 (452)
.+.-.+++|+|.+ .||+-...++.+-+|+|. .|.- .+
T Consensus 176 ~l~Gk~vvViGRS~iVGkPla~LL~~~~ATVT-------------------------------i~Hs------~T----- 213 (303)
T 4b4u_A 176 EIAGKHAVVVGRSAILGKPMAMMLLQANATVT-------------------------------ICHS------RT----- 213 (303)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEE-------------------------------EECT------TC-----
T ss_pred CCCCCEEEEEeccccccchHHHHHHhcCCEEE-------------------------------EecC------CC-----
Confidence 4566889999985 499999998888776651 1100 00
Q ss_pred CCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEeeecC
Q 012946 280 AFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLTCDM 347 (452)
Q Consensus 280 ~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs~D~ 347 (452)
.+ +.++++.+||||.++- .|.||+.+|+ |+|+ ||||+....
T Consensus 214 -----------~d-----l~~~~~~ADIvV~A~G----~p~~i~~d~v---k~Ga----vVIDVGin~ 254 (303)
T 4b4u_A 214 -----------QN-----LPELVKQADIIVGAVG----KAELIQKDWI---KQGA----VVVDAGFHP 254 (303)
T ss_dssp -----------SS-----HHHHHHTCSEEEECSC----STTCBCGGGS---CTTC----EEEECCCBC
T ss_pred -----------CC-----HHHHhhcCCeEEeccC----CCCccccccc---cCCC----EEEEeceec
Confidence 00 2667888999998853 4679999998 8999 999998754
No 91
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=93.66 E-value=0.12 Score=53.73 Aligned_cols=46 Identities=22% Similarity=0.164 Sum_probs=35.2
Q ss_pred CccHHHHHHHHHHhhHHHHhcCCCCCCCCceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 176 YPSLAAAKAAIISVGEEIATEGLPSGICPLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 176 ~~~~~~~~~~~~~~g~~i~~~G~~~~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
|+-..-+.++++.. |+ ++...+|+|.|.|+||..+++.+.++|++|
T Consensus 216 ~Gv~~~~~~~~~~~-------g~--~l~g~~vaVqGfGnVG~~~a~~L~e~Gakv 261 (440)
T 3aog_A 216 RGVFITAAAAAEKI-------GL--QVEGARVAIQGFGNVGNAAARAFHDHGARV 261 (440)
T ss_dssp HHHHHHHHHHHHHH-------TC--CSTTCEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHhc-------CC--CccCCEEEEeccCHHHHHHHHHHHHCCCEE
Confidence 34444455555543 32 566789999999999999999999999987
No 92
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=93.61 E-value=0.087 Score=54.48 Aligned_cols=46 Identities=11% Similarity=0.088 Sum_probs=35.6
Q ss_pred CccHHHHHHHHHHhhHHHHhcCCCCCCCCceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 176 YPSLAAAKAAIISVGEEIATEGLPSGICPLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 176 ~~~~~~~~~~~~~~g~~i~~~G~~~~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
|+-...+.++++..|. ++.-.+|+|.|.|+||..+++.+.++|++|
T Consensus 191 ~Gv~~~~~~~~~~~g~---------~l~gk~vaVqG~GnVG~~aa~~L~e~GakV 236 (421)
T 1v9l_A 191 FGVAVATREMAKKLWG---------GIEGKTVAIQGMGNVGRWTAYWLEKMGAKV 236 (421)
T ss_dssp HHHHHHHHHHHHHHHS---------CCTTCEEEEECCSHHHHHHHHHHHTTTCEE
T ss_pred HHHHHHHHHHHHhcCC---------CcCCCEEEEECcCHHHHHHHHHHHHCCCEE
Confidence 3444455556665432 556789999999999999999999999987
No 93
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=93.56 E-value=0.022 Score=55.83 Aligned_cols=28 Identities=7% Similarity=0.035 Sum_probs=24.8
Q ss_pred CCceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 203 CPLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 203 ~p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
...+|.|||.|+.|..-...+.+.|..|
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~~V 35 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGKRV 35 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEE
Confidence 4578999999999999999888899876
No 94
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=93.24 E-value=0.1 Score=52.18 Aligned_cols=24 Identities=17% Similarity=0.052 Sum_probs=20.3
Q ss_pred CCceEEEEcCcHHHHHHHHHHhcC
Q 012946 203 CPLVFVFTGSGHASIAAQELFKLL 226 (452)
Q Consensus 203 ~p~kv~V~G~G~vg~gAi~~a~~L 226 (452)
+.+||+|+|+|.+|.-.++.+.+-
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~~ 38 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKDE 38 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT
T ss_pred CccEEEEECCCHHHHHHHHHHhcC
Confidence 568999999999999988888764
No 95
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=93.24 E-value=0.18 Score=50.27 Aligned_cols=92 Identities=14% Similarity=0.077 Sum_probs=57.6
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE--e--CCCChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCCC
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF--V--DPSRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSSR 279 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v--v--~~~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~~ 279 (452)
-.+|+|+|+|.+|+.|++.|+.+|+.| + ++++++...+ .++.. .+ ++..
T Consensus 188 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-----------~lGa~--~v----~~~~---------- 240 (366)
T 1yqd_A 188 GKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALK-----------NFGAD--SF----LVSR---------- 240 (366)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHH-----------TSCCS--EE----EETT----------
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----------hcCCc--eE----Eecc----------
Confidence 368999999999999999999999977 2 2233333331 23332 11 1110
Q ss_pred CCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEeee
Q 012946 280 AFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLTC 345 (452)
Q Consensus 280 ~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs~ 345 (452)
++ ..+.+....+|++|+|+-.+. ..++.++.|+++. .|+.++.
T Consensus 241 ---------~~-----~~~~~~~~~~D~vid~~g~~~-----~~~~~~~~l~~~G----~iv~~g~ 283 (366)
T 1yqd_A 241 ---------DQ-----EQMQAAAGTLDGIIDTVSAVH-----PLLPLFGLLKSHG----KLILVGA 283 (366)
T ss_dssp ---------CH-----HHHHHTTTCEEEEEECCSSCC-----CSHHHHHHEEEEE----EEEECCC
T ss_pred ---------CH-----HHHHHhhCCCCEEEECCCcHH-----HHHHHHHHHhcCC----EEEEEcc
Confidence 00 012333456899999985432 2467788888887 6777765
No 96
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=93.19 E-value=0.22 Score=51.31 Aligned_cols=30 Identities=17% Similarity=0.073 Sum_probs=27.5
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhc-CCCEE
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKL-LPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~-LGa~v 230 (452)
++.-.+|+|.|.|+||..+++.+.+ +|+++
T Consensus 206 ~l~g~~vaVqG~GnVG~~~a~~L~e~~Gakv 236 (415)
T 2tmg_A 206 DPKKATVAVQGFGNVGQFAALLISQELGSKV 236 (415)
T ss_dssp CTTTCEEEEECCSHHHHHHHHHHHHTTCCEE
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHhcCCEE
Confidence 5667899999999999999999999 99987
No 97
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=93.12 E-value=0.074 Score=52.08 Aligned_cols=89 Identities=13% Similarity=0.122 Sum_probs=55.7
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCCEE-eCC---CChhhHHhhhCCCCCccccCCCCceeEEEeeeeecccccccCCCCCC
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPHTF-VDP---SRLPELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMVEPKDSSRA 280 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa~v-v~~---~~l~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~~~~~~~~~ 280 (452)
.||.|||.|+.|..-..-+.+-|..| +.. +..+++.+ .+..
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~------------~G~~----------------------- 50 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPLTK------------LGAT----------------------- 50 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTTTT------------TTCE-----------------------
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH------------cCCe-----------------------
Confidence 47999999999999888888889877 322 22233321 0111
Q ss_pred CcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEeee
Q 012946 281 FDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLTC 345 (452)
Q Consensus 281 ~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs~ 345 (452)
...+| .+.+..+||||.|.--+.-.--++..+-+..+++|. +|||.|.
T Consensus 51 -----~~~s~--------~e~~~~~dvvi~~l~~~~~~~~v~~~~~~~~~~~~~----iiid~sT 98 (297)
T 4gbj_A 51 -----VVENA--------IDAITPGGIVFSVLADDAAVEELFSMELVEKLGKDG----VHVSMST 98 (297)
T ss_dssp -----ECSSG--------GGGCCTTCEEEECCSSHHHHHHHSCHHHHHHHCTTC----EEEECSC
T ss_pred -----EeCCH--------HHHHhcCCceeeeccchhhHHHHHHHHHHhhcCCCe----EEEECCC
Confidence 01122 556788999998864332111234455677789999 9999885
No 98
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=93.02 E-value=0.037 Score=53.38 Aligned_cols=26 Identities=19% Similarity=0.118 Sum_probs=23.8
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
.+|.|||.|..|..-...+.+.|..|
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V 27 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSV 27 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeE
Confidence 58999999999999999999999977
No 99
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=92.97 E-value=0.15 Score=53.42 Aligned_cols=31 Identities=16% Similarity=0.186 Sum_probs=28.3
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEEe
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTFV 231 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~vv 231 (452)
++.-.+|+|-|.|+||..|++.+.++||+||
T Consensus 249 ~l~g~~vaVqG~GnVG~~~a~~L~~~GakvV 279 (470)
T 2bma_A 249 PVEKQTAVVSGSGNVALYCVQKLLHLNVKVL 279 (470)
T ss_dssp CGGGCEEEEECSSHHHHHHHHHHHHTTCEEC
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCEEE
Confidence 5667899999999999999999999999873
No 100
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=92.91 E-value=0.061 Score=52.29 Aligned_cols=27 Identities=15% Similarity=0.212 Sum_probs=24.1
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
..+|.|||.|..|..-...+.+.|..|
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V 41 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGV 41 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCE
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeE
Confidence 358999999999999999999999876
No 101
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=92.56 E-value=0.095 Score=54.62 Aligned_cols=47 Identities=17% Similarity=0.140 Sum_probs=35.5
Q ss_pred CccHHHHHHHHHHhhHHHHhcCCCCCCCCceEEEEcCcHHHHHHHHHHhcCCCEEe
Q 012946 176 YPSLAAAKAAIISVGEEIATEGLPSGICPLVFVFTGSGHASIAAQELFKLLPHTFV 231 (452)
Q Consensus 176 ~~~~~~~~~~~~~~g~~i~~~G~~~~i~p~kv~V~G~G~vg~gAi~~a~~LGa~vv 231 (452)
|+-...+.++++.. |+ ++.-.+|+|.|.|+||..+++.+.++|+++|
T Consensus 211 ~Gv~~~~~~~~~~~-------G~--~l~g~~v~VqG~GnVG~~~a~~L~~~GakvV 257 (449)
T 1bgv_A 211 YGSVYYVEAVMKHE-------ND--TLVGKTVALAGFGNVAWGAAKKLAELGAKAV 257 (449)
T ss_dssp HHHHHHHHHHHHHT-------TC--CSTTCEEEECCSSHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHHHc-------cC--CcCCCEEEEECCCHHHHHHHHHHHHCCCEEE
Confidence 33344455555543 32 5677899999999999999999999999873
No 102
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=92.49 E-value=0.046 Score=53.83 Aligned_cols=28 Identities=11% Similarity=0.135 Sum_probs=25.2
Q ss_pred CCceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 203 CPLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 203 ~p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
...+|.|||.|..|..-...+.+.|..|
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V 57 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYAL 57 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEE
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeE
Confidence 4579999999999999999999999977
No 103
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=92.46 E-value=0.051 Score=53.18 Aligned_cols=28 Identities=14% Similarity=-0.040 Sum_probs=25.3
Q ss_pred CCceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 203 CPLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 203 ~p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
...+|.|||.|..|..-...+.+.|..|
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~~G~~V 47 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLKNGFKV 47 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred cCCEEEEECccHHHHHHHHHHHHCCCeE
Confidence 4578999999999999999999999977
No 104
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=92.30 E-value=0.05 Score=52.95 Aligned_cols=27 Identities=11% Similarity=0.011 Sum_probs=24.5
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
..+|.|||.|..|..-...+.+.|..|
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V 33 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLST 33 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeE
Confidence 478999999999999999999999977
No 105
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=92.29 E-value=0.13 Score=53.25 Aligned_cols=30 Identities=10% Similarity=0.082 Sum_probs=27.8
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
++.-.+|+|.|.|+||..|++.+.++|++|
T Consensus 218 ~l~g~~vaVqG~GnVG~~aa~~l~e~GakV 247 (424)
T 3k92_A 218 KLQNARIIIQGFGNAGSFLAKFMHDAGAKV 247 (424)
T ss_dssp CGGGCEEEEECCSHHHHHHHHHHHHHTCEE
T ss_pred CcccCEEEEECCCHHHHHHHHHHHHCCCEE
Confidence 566789999999999999999999999987
No 106
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=92.16 E-value=0.34 Score=46.87 Aligned_cols=25 Identities=24% Similarity=0.198 Sum_probs=23.3
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCC
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPH 228 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa 228 (452)
..+|+|+|+|-+|..++..+..+|+
T Consensus 119 ~~~vlvlGaGgaarav~~~L~~~G~ 143 (271)
T 1npy_A 119 NAKVIVHGSGGMAKAVVAAFKNSGF 143 (271)
T ss_dssp TSCEEEECSSTTHHHHHHHHHHTTC
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCC
Confidence 4689999999999999999999998
No 107
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=91.78 E-value=0.2 Score=50.20 Aligned_cols=27 Identities=11% Similarity=-0.011 Sum_probs=25.0
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
--+|+|+|+|.+|+.|++.|+.+|+.|
T Consensus 195 g~~VlV~GaG~vG~~aiqlak~~Ga~V 221 (369)
T 1uuf_A 195 GKKVGVVGIGGLGHMGIKLAHAMGAHV 221 (369)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEE
Confidence 367999999999999999999999986
No 108
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=91.07 E-value=0.56 Score=45.95 Aligned_cols=28 Identities=18% Similarity=0.279 Sum_probs=22.2
Q ss_pred CCceEEEEcCcHHHHHHHHHHhcC-CC-EE
Q 012946 203 CPLVFVFTGSGHASIAAQELFKLL-PH-TF 230 (452)
Q Consensus 203 ~p~kv~V~G~G~vg~gAi~~a~~L-Ga-~v 230 (452)
...+|.|+|+|+.|..-+..+... |. .|
T Consensus 134 ~~~~igiIG~G~~g~~~a~~l~~~~g~~~V 163 (312)
T 2i99_A 134 SSEVLCILGAGVQAYSHYEIFTEQFSFKEV 163 (312)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHCCCSEE
T ss_pred CCcEEEEECCcHHHHHHHHHHHHhCCCcEE
Confidence 467899999999999887777664 76 44
No 109
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=90.71 E-value=0.23 Score=48.86 Aligned_cols=27 Identities=7% Similarity=0.021 Sum_probs=23.9
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCC--EE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPH--TF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa--~v 230 (452)
..+|.|||.|..|..-+..+.+.|. .|
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V 61 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKI 61 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEE
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEE
Confidence 3789999999999998888999898 66
No 110
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=90.48 E-value=0.47 Score=42.52 Aligned_cols=26 Identities=23% Similarity=0.169 Sum_probs=23.6
Q ss_pred ceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
+||+|+|+ |.+|...++.|.+.|++|
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V 27 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEV 27 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEE
Confidence 47999996 999999999999999987
No 111
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=90.42 E-value=0.35 Score=47.83 Aligned_cols=45 Identities=18% Similarity=0.241 Sum_probs=33.4
Q ss_pred hhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEeeecCCCCeee
Q 012946 299 EKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLTCDMEGSIEI 353 (452)
Q Consensus 299 ~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs~D~gG~iE~ 353 (452)
++.++.+||||+|.-- +.| ++..+. ++||. .|+||..+.-+-.|+
T Consensus 178 ~eav~~aDIVi~aT~s--~~p-vl~~~~---l~~G~----~V~~vGs~~p~~~El 222 (313)
T 3hdj_A 178 ADIAAQADIVVTATRS--TTP-LFAGQA---LRAGA----FVGAIGSSLPHTREL 222 (313)
T ss_dssp HHHHHHCSEEEECCCC--SSC-SSCGGG---CCTTC----EEEECCCSSTTCCCC
T ss_pred HHHHhhCCEEEEccCC--CCc-ccCHHH---cCCCc----EEEECCCCCCchhhc
Confidence 5567789999999754 345 445443 59999 999999887666776
No 112
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=90.13 E-value=0.59 Score=46.55 Aligned_cols=27 Identities=15% Similarity=0.046 Sum_probs=24.7
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCC-EE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPH-TF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa-~v 230 (452)
-.+|+|+|+|.+|+.|++.|+.+|+ .|
T Consensus 196 g~~VlV~GaG~vG~~aiqlak~~Ga~~V 223 (376)
T 1e3i_A 196 GSTCAVFGLGCVGLSAIIGCKIAGASRI 223 (376)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeE
Confidence 3689999999999999999999999 66
No 113
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=90.11 E-value=0.059 Score=52.18 Aligned_cols=26 Identities=15% Similarity=0.126 Sum_probs=24.0
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
.+|.|+|.|+.|..-...+.+.|..|
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V 29 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLL 29 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEE
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeE
Confidence 68999999999999999999999977
No 114
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=90.01 E-value=0.33 Score=44.82 Aligned_cols=28 Identities=11% Similarity=-0.096 Sum_probs=23.0
Q ss_pred CCceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 203 CPLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 203 ~p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
...+|.|+|+|..|..-+..+.+.|.+|
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V 54 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKV 54 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEE
Confidence 3578999999999999888888888765
No 115
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=89.94 E-value=0.51 Score=46.77 Aligned_cols=27 Identities=19% Similarity=0.108 Sum_probs=24.9
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
-.+|+|+|+|.+|+.|++.|+.+|+.|
T Consensus 181 g~~VlV~GaG~vG~~a~qlak~~Ga~V 207 (357)
T 2cf5_A 181 GLRGGILGLGGVGHMGVKIAKAMGHHV 207 (357)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeE
Confidence 367999999999999999999999977
No 116
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=89.79 E-value=0.17 Score=50.94 Aligned_cols=27 Identities=11% Similarity=0.106 Sum_probs=24.5
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
..+|.|||.|+.|..-...+.+.|..|
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V 48 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHEC 48 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEE
Confidence 468999999999999999999999977
No 117
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=89.67 E-value=0.73 Score=45.80 Aligned_cols=27 Identities=15% Similarity=-0.011 Sum_probs=24.7
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCC-EE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPH-TF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa-~v 230 (452)
-.+|+|+|+|.+|+.|++.|+.+|+ .|
T Consensus 193 g~~VlV~GaG~vG~~a~qla~~~Ga~~V 220 (374)
T 1cdo_A 193 GSTCAVFGLGAVGLAAVMGCHSAGAKRI 220 (374)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEE
Confidence 3679999999999999999999999 66
No 118
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=89.53 E-value=0.21 Score=44.12 Aligned_cols=25 Identities=20% Similarity=0.345 Sum_probs=23.5
Q ss_pred eEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 206 VFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 206 kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
.|+|+|+|.+|+.|+..|.+.|..|
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V 28 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQV 28 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCE
Confidence 3999999999999999999999976
No 119
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=89.40 E-value=0.5 Score=43.54 Aligned_cols=28 Identities=7% Similarity=-0.065 Sum_probs=24.3
Q ss_pred CCceEEEEcC-cHHHHHHHHHHhcCC-CEE
Q 012946 203 CPLVFVFTGS-GHASIAAQELFKLLP-HTF 230 (452)
Q Consensus 203 ~p~kv~V~G~-G~vg~gAi~~a~~LG-a~v 230 (452)
...+|+|+|+ |..|+..++.|.+.| +.|
T Consensus 22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V 51 (236)
T 3qvo_A 22 HMKNVLILGAGGQIARHVINQLADKQTIKQ 51 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEE
T ss_pred cccEEEEEeCCcHHHHHHHHHHHhCCCceE
Confidence 3578999995 999999999999999 766
No 120
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=89.26 E-value=0.057 Score=52.03 Aligned_cols=26 Identities=12% Similarity=0.028 Sum_probs=22.5
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
.+|.|||.|..|..-...+.+.|..|
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V 27 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDV 27 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCE
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeE
Confidence 36999999999999888888888866
No 121
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=89.24 E-value=0.61 Score=45.20 Aligned_cols=25 Identities=28% Similarity=0.296 Sum_probs=23.6
Q ss_pred eEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 206 VFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 206 kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
+|+|+|+ |.+|+.|++.|+.+|++|
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~V 174 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQV 174 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCE
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEE
Confidence 4999998 999999999999999977
No 122
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=89.18 E-value=0.84 Score=43.84 Aligned_cols=29 Identities=10% Similarity=0.021 Sum_probs=25.7
Q ss_pred CCCceEEEEc-CcHHHHHHHHHHhcCCCEE
Q 012946 202 ICPLVFVFTG-SGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 202 i~p~kv~V~G-~G~vg~gAi~~a~~LGa~v 230 (452)
+...+++|+| +|-+|+..+..+.+.|+.|
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V 146 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEV 146 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEE
Confidence 4457899999 8999999999999999976
No 123
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=88.90 E-value=0.31 Score=47.87 Aligned_cols=27 Identities=15% Similarity=0.070 Sum_probs=24.0
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCC-CEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLP-HTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LG-a~v 230 (452)
..+|.|||.|..|..-...+.+.| ..|
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V 51 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARL 51 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEE
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeE
Confidence 368999999999999999999999 766
No 124
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=88.67 E-value=0.25 Score=48.33 Aligned_cols=27 Identities=19% Similarity=0.215 Sum_probs=23.6
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCC-EE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPH-TF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa-~v 230 (452)
-.+|.|||.|..|..-...+.+.|. .|
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V 51 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDM 51 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEE
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeE
Confidence 4689999999999999888888898 66
No 125
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=88.22 E-value=0.13 Score=49.11 Aligned_cols=24 Identities=13% Similarity=0.102 Sum_probs=21.3
Q ss_pred eEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 206 VFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 206 kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
+|.|+|+|..|..-...+.+ |++|
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V 26 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPT 26 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCE
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeE
Confidence 69999999999998888888 9876
No 126
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=88.12 E-value=0.1 Score=50.10 Aligned_cols=26 Identities=12% Similarity=0.068 Sum_probs=23.4
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
.+|.|+|+|..|..-...+.+.|.+|
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V 31 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSL 31 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEE
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEE
Confidence 58999999999999888888889876
No 127
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=88.06 E-value=0.38 Score=46.23 Aligned_cols=26 Identities=8% Similarity=-0.058 Sum_probs=24.2
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
.+|.|+|+|..|.+-+..+.+.|+.|
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V 30 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAV 30 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeE
Confidence 58999999999999999999999987
No 128
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=87.93 E-value=0.11 Score=49.94 Aligned_cols=27 Identities=15% Similarity=0.017 Sum_probs=23.9
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
+.+|.|+|+|..|..-+..+.+.|..|
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V 30 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTV 30 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEE
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeE
Confidence 478999999999999888888889876
No 129
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=87.93 E-value=0.32 Score=47.98 Aligned_cols=27 Identities=19% Similarity=0.159 Sum_probs=25.0
Q ss_pred CceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
..+|+|+|+ |.+|+.|++.|+.+|++|
T Consensus 160 g~~VlV~Gasg~iG~~~~~~a~~~Ga~V 187 (342)
T 4eye_A 160 GETVLVLGAAGGIGTAAIQIAKGMGAKV 187 (342)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEE
Confidence 467999998 999999999999999987
No 130
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=87.89 E-value=0.6 Score=43.81 Aligned_cols=27 Identities=22% Similarity=0.313 Sum_probs=23.4
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
..+|.|+|+|..|..-+..+.+.|..|
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~g~~v 29 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQTPHEL 29 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTSSCEE
T ss_pred ccEEEEECCCHHHHHHHHHHHhCCCeE
Confidence 368999999999999888888888766
No 131
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=87.84 E-value=0.17 Score=47.88 Aligned_cols=28 Identities=14% Similarity=0.119 Sum_probs=23.8
Q ss_pred CCCceEEEEcCcHHHHHHHHHHhcCCCE
Q 012946 202 ICPLVFVFTGSGHASIAAQELFKLLPHT 229 (452)
Q Consensus 202 i~p~kv~V~G~G~vg~gAi~~a~~LGa~ 229 (452)
++..+|.|+|+|..|..-...+.+.|..
T Consensus 8 ~~~m~i~iiG~G~mG~~~a~~l~~~g~~ 35 (266)
T 3d1l_A 8 IEDTPIVLIGAGNLATNLAKALYRKGFR 35 (266)
T ss_dssp GGGCCEEEECCSHHHHHHHHHHHHHTCC
T ss_pred CCCCeEEEEcCCHHHHHHHHHHHHCCCe
Confidence 3457899999999999988888888876
No 132
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=87.78 E-value=0.44 Score=41.27 Aligned_cols=31 Identities=16% Similarity=0.091 Sum_probs=26.6
Q ss_pred CCCCCceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 200 SGICPLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 200 ~~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
...+..+|+|+|+|.+|+..+..+...|+.|
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V 45 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASSSGHSV 45 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHhCCCeE
Confidence 3456789999999999999999999999976
No 133
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=87.72 E-value=0.66 Score=45.92 Aligned_cols=27 Identities=11% Similarity=-0.034 Sum_probs=25.1
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
-.+|+|+|+|.+|+.|++.|+.+|+.|
T Consensus 180 g~~VlV~GaG~vG~~~~qlak~~Ga~V 206 (360)
T 1piw_A 180 GKKVGIVGLGGIGSMGTLISKAMGAET 206 (360)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEE
Confidence 368999999999999999999999977
No 134
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=87.52 E-value=0.1 Score=48.04 Aligned_cols=29 Identities=10% Similarity=-0.095 Sum_probs=23.5
Q ss_pred CCCceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 202 ICPLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 202 i~p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
+...+|.|+|+|+.|..-+.-+.+.|..|
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L~~~G~~V 45 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKMLQCGYSV 45 (201)
Confidence 34678999999999998888777777655
No 135
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=87.28 E-value=0.28 Score=46.16 Aligned_cols=30 Identities=13% Similarity=0.115 Sum_probs=25.0
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
++...+|.|||+|+.|..-+..+.+.|..|
T Consensus 16 ~~~~~kIgiIG~G~mG~alA~~L~~~G~~V 45 (245)
T 3dtt_A 16 YFQGMKIAVLGTGTVGRTMAGALADLGHEV 45 (245)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHCCCEE
Confidence 557899999999999999999998889877
No 136
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=87.24 E-value=0.61 Score=47.28 Aligned_cols=35 Identities=26% Similarity=0.365 Sum_probs=30.0
Q ss_pred cCCCCCCCCceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 196 EGLPSGICPLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 196 ~G~~~~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
.|+|..-.+.+|+|||+|.+|+.|+..+.+.|..|
T Consensus 36 ~~~~~~~~~~~V~IIGAGiaGL~aA~~L~~~G~~V 70 (376)
T 2e1m_A 36 NGLNPPGPPKRILIVGAGIAGLVAGDLLTRAGHDV 70 (376)
T ss_dssp SCSSSCCSCCEEEEECCBHHHHHHHHHHHHTSCEE
T ss_pred ccCCCCCCCceEEEECCCHHHHHHHHHHHHCCCcE
Confidence 45655556889999999999999999999999876
No 137
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=86.81 E-value=0.69 Score=46.54 Aligned_cols=27 Identities=15% Similarity=0.047 Sum_probs=23.1
Q ss_pred CCceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 203 CPLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 203 ~p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
+..+|+|+|+|.+|...+..+.+. ..|
T Consensus 15 ~~~~v~IiGaG~iG~~ia~~L~~~-~~V 41 (365)
T 2z2v_A 15 RHMKVLILGAGNIGRAIAWDLKDE-FDV 41 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT-SEE
T ss_pred CCCeEEEEcCCHHHHHHHHHHHcC-CeE
Confidence 578999999999999999988887 655
No 138
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=86.80 E-value=1.3 Score=40.39 Aligned_cols=30 Identities=13% Similarity=0.030 Sum_probs=25.2
Q ss_pred CCCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
.+...+|+|+|+ |-.|...++.+.+.|+.|
T Consensus 18 ~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V 48 (236)
T 3e8x_A 18 YFQGMRVLVVGANGKVARYLLSELKNKGHEP 48 (236)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CcCCCeEEEECCCChHHHHHHHHHHhCCCeE
Confidence 456789999998 999999999999999987
No 139
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=86.58 E-value=0.71 Score=42.58 Aligned_cols=27 Identities=19% Similarity=0.196 Sum_probs=23.5
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
-.+|.|+|+|+.|..-+..+.+.|.+|
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V 49 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPA 49 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEE
Confidence 368999999999999888888888865
No 140
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=86.45 E-value=1.2 Score=40.37 Aligned_cols=25 Identities=8% Similarity=0.105 Sum_probs=22.2
Q ss_pred eEEEEcC-cHHHHHHHHHHh-cCCCEE
Q 012946 206 VFVFTGS-GHASIAAQELFK-LLPHTF 230 (452)
Q Consensus 206 kv~V~G~-G~vg~gAi~~a~-~LGa~v 230 (452)
+|+|+|+ |..|+..++.+. +.|+.|
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~g~~V 33 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYTDMHI 33 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCCCEE
T ss_pred EEEEEeCCcHHHHHHHHHHHhcCCceE
Confidence 4999996 999999999888 899987
No 141
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=86.37 E-value=0.69 Score=47.71 Aligned_cols=47 Identities=21% Similarity=0.139 Sum_probs=35.6
Q ss_pred CccHHHHHHHHHHhhHHHHhcCCCCCCCCceEEEEcCcHHHHHHHHHHhcCCCEEe
Q 012946 176 YPSLAAAKAAIISVGEEIATEGLPSGICPLVFVFTGSGHASIAAQELFKLLPHTFV 231 (452)
Q Consensus 176 ~~~~~~~~~~~~~~g~~i~~~G~~~~i~p~kv~V~G~G~vg~gAi~~a~~LGa~vv 231 (452)
|+-..-+.++++.. |+ ++.-.+|+|.|.|+||..+++.+.++|++||
T Consensus 199 ~Gv~~~~~~~~~~~-------g~--~l~gk~vaVqG~GnVG~~~a~~L~~~GakVV 245 (419)
T 3aoe_E 199 LGALLVLEALAKRR-------GL--DLRGARVVVQGLGQVGAAVALHAERLGMRVV 245 (419)
T ss_dssp HHHHHHHHHHHHHH-------TC--CCTTCEEEEECCSHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHhc-------CC--CccCCEEEEECcCHHHHHHHHHHHHCCCEEE
Confidence 44444555555543 32 5667899999999999999999999999873
No 142
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=86.19 E-value=2.2 Score=39.45 Aligned_cols=39 Identities=21% Similarity=0.019 Sum_probs=29.1
Q ss_pred CCCceEEEEcC-cHHHHHHHHHHhcCCCEE---e-CCCChhhHH
Q 012946 202 ICPLVFVFTGS-GHASIAAQELFKLLPHTF---V-DPSRLPELF 240 (452)
Q Consensus 202 i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v---v-~~~~l~~~~ 240 (452)
+...+|+|+|+ |-.|+..++.+.+.|+.| . ++..++++.
T Consensus 10 ~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~ 53 (265)
T 2o23_A 10 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQA 53 (265)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHH
Confidence 34578999998 789999999999999987 2 234455544
No 143
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=85.99 E-value=2 Score=40.06 Aligned_cols=29 Identities=21% Similarity=0.260 Sum_probs=24.7
Q ss_pred CCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 202 ICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 202 i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
+...+++|+|+ |-.|+...+.+.+.|+.|
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V 34 (257)
T 3tpc_A 5 LKSRVFIVTGASSGLGAAVTRMLAQEGATV 34 (257)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEE
Confidence 34578999998 679999999999999987
No 144
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=85.95 E-value=0.19 Score=48.84 Aligned_cols=27 Identities=19% Similarity=0.113 Sum_probs=23.6
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
..+|.|+|+|..|..-+..+.+.|..|
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V 56 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTV 56 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEE
Confidence 478999999999999888888888866
No 145
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=85.79 E-value=0.89 Score=45.31 Aligned_cols=27 Identities=19% Similarity=0.070 Sum_probs=24.5
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCC-EE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPH-TF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa-~v 230 (452)
..+|+|+|+|.+|+.|++.|+.+|+ +|
T Consensus 194 g~~VlV~GaG~vG~~a~q~a~~~Ga~~V 221 (378)
T 3uko_A 194 GSNVAIFGLGTVGLAVAEGAKTAGASRI 221 (378)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHHTCSCE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeE
Confidence 4679999999999999999999999 55
No 146
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=85.78 E-value=0.16 Score=49.91 Aligned_cols=26 Identities=15% Similarity=0.126 Sum_probs=23.2
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
.||.+||.|+-|..-..-+.+-|..|
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~~v 29 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGYLL 29 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEE
T ss_pred CEEEEeeehHHHHHHHHHHHhCCCeE
Confidence 47999999999999888888889876
No 147
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=85.74 E-value=0.69 Score=45.96 Aligned_cols=32 Identities=19% Similarity=0.182 Sum_probs=24.1
Q ss_pred CCCCCCceEEEEcCcHHHHHHHHHHhcCCC-EE
Q 012946 199 PSGICPLVFVFTGSGHASIAAQELFKLLPH-TF 230 (452)
Q Consensus 199 ~~~i~p~kv~V~G~G~vg~gAi~~a~~LGa-~v 230 (452)
|++....||.|+|+|.+|...+..+...|. ++
T Consensus 2 ~~~m~~~kI~viGaG~vG~~~a~~l~~~~~~~v 34 (324)
T 3gvi_A 2 PGSMARNKIALIGSGMIGGTLAHLAGLKELGDV 34 (324)
T ss_dssp ----CCCEEEEECCSHHHHHHHHHHHHTTCCEE
T ss_pred CCCCcCCEEEEECCCHHHHHHHHHHHhCCCCeE
Confidence 345567899999999999998888877776 65
No 148
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=85.73 E-value=0.94 Score=44.98 Aligned_cols=27 Identities=15% Similarity=-0.017 Sum_probs=24.7
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCC-EE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPH-TF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa-~v 230 (452)
-.+|+|+|+|.+|+.|++.|+.+|+ .|
T Consensus 192 g~~VlV~GaG~vG~~aiqlak~~Ga~~V 219 (373)
T 1p0f_A 192 GSTCAVFGLGGVGFSAIVGCKAAGASRI 219 (373)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeE
Confidence 3689999999999999999999999 66
No 149
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=85.52 E-value=2.5 Score=44.20 Aligned_cols=28 Identities=21% Similarity=0.051 Sum_probs=25.0
Q ss_pred CCceEEEEcCcHHHHHHHHHHhcC-CC-EE
Q 012946 203 CPLVFVFTGSGHASIAAQELFKLL-PH-TF 230 (452)
Q Consensus 203 ~p~kv~V~G~G~vg~gAi~~a~~L-Ga-~v 230 (452)
+-.||.|+|+|.+|+.....+... |. .|
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V 46 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKV 46 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEE
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeE
Confidence 357999999999999999888888 99 77
No 150
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=85.17 E-value=0.81 Score=45.00 Aligned_cols=27 Identities=15% Similarity=0.087 Sum_probs=24.8
Q ss_pred CceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
-.+|+|+|+ |.+|+.+++.|+.+|+.|
T Consensus 170 g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V 197 (347)
T 2hcy_A 170 GHWVAISGAAGGLGSLAVQYAKAMGYRV 197 (347)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCcE
Confidence 367999999 899999999999999987
No 151
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=85.03 E-value=1.1 Score=40.24 Aligned_cols=26 Identities=19% Similarity=0.189 Sum_probs=23.6
Q ss_pred ceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
+||+|+|+ |.+|...++.+.+.|+.|
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V 27 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEV 27 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEE
Confidence 47999998 999999999999999987
No 152
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=85.01 E-value=2.4 Score=41.72 Aligned_cols=80 Identities=18% Similarity=0.174 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHH--HHHHHHHhhcCCCCCcccccccccCccHHHHHHHHHHhhHHHHhcCCCCCCCCceEEEEcCcHHHH
Q 012946 140 KFAGRAAIIDLL--KGLGQRYLNLGYSTPFLTLGAAYMYPSLAAAKAAIISVGEEIATEGLPSGICPLVFVFTGSGHASI 217 (452)
Q Consensus 140 ~~AG~~avi~al--~~~g~~~l~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~G~~~~i~p~kv~V~G~G~vg~ 217 (452)
.+.-+.+....+ .+||.+++.. ..|.=.+...+.|.+...+.+ .....++++ ++.+|+.+|.|..+.
T Consensus 68 ~~~~~y~~~~~~~E~~wa~~l~~~--~~p~~~l~~fpy~~~~~~l~~------~E~~la~l~---~g~rVLDIGcG~G~~ 136 (298)
T 3fpf_A 68 LIRKFYVNLGMKLEMEKAQEVIES--DSPWETLRSFYFYPRYLELLK------NEAALGRFR---RGERAVFIGGGPLPL 136 (298)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC--SSHHHHHHTSTTHHHHHHHHH------HHHHHTTCC---TTCEEEEECCCSSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcc--CChHHhhccCCCcccHHHHHH------HHHHHcCCC---CcCEEEEECCCccHH
Confidence 333433333333 3466655442 234333333344455444433 223455553 689999999999888
Q ss_pred HHHHHHhcCCCEE
Q 012946 218 AAQELFKLLPHTF 230 (452)
Q Consensus 218 gAi~~a~~LGa~v 230 (452)
.|+.+++..|+.|
T Consensus 137 ta~~lA~~~ga~V 149 (298)
T 3fpf_A 137 TGILLSHVYGMRV 149 (298)
T ss_dssp HHHHHHHTTCCEE
T ss_pred HHHHHHHccCCEE
Confidence 8888888889987
No 153
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=84.39 E-value=1 Score=43.59 Aligned_cols=26 Identities=12% Similarity=0.051 Sum_probs=21.2
Q ss_pred ceEEEEc-CcHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTG-SGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G-~G~vg~gAi~~a~~LGa~v 230 (452)
.+|.||| +|..|..-...+.+.|..|
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V 48 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPI 48 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCE
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeE
Confidence 4799999 9999998888887776543
No 154
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=84.27 E-value=0.63 Score=45.81 Aligned_cols=26 Identities=23% Similarity=0.098 Sum_probs=22.4
Q ss_pred ceEEEE-cCcHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFT-GSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~-G~G~vg~gAi~~a~~LGa~v 230 (452)
.+|+|+ |+|.+|+.|++.|+.+|++|
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~V 192 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRP 192 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEE
Confidence 356665 88999999999999999987
No 155
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=83.87 E-value=0.72 Score=45.03 Aligned_cols=27 Identities=11% Similarity=0.132 Sum_probs=24.8
Q ss_pred CceEEEEc-CcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTG-SGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G-~G~vg~gAi~~a~~LGa~v 230 (452)
..+|+|+| +|.+|+.|++.|+.+|++|
T Consensus 149 g~~vlV~Ga~g~iG~~~~~~a~~~Ga~V 176 (334)
T 3qwb_A 149 GDYVLLFAAAGGVGLILNQLLKMKGAHT 176 (334)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHTTCEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 46799999 7999999999999999987
No 156
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=83.82 E-value=2 Score=40.03 Aligned_cols=25 Identities=16% Similarity=0.195 Sum_probs=21.7
Q ss_pred eEEEEcC-cHHHHHHHHHHhcC--CCEE
Q 012946 206 VFVFTGS-GHASIAAQELFKLL--PHTF 230 (452)
Q Consensus 206 kv~V~G~-G~vg~gAi~~a~~L--Ga~v 230 (452)
+|+|+|+ |.+|..-++.+.+. |+.|
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V 28 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQI 28 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGE
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceE
Confidence 5889998 99999999999887 8866
No 157
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=83.73 E-value=0.69 Score=47.73 Aligned_cols=31 Identities=6% Similarity=-0.018 Sum_probs=28.1
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEEe
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTFV 231 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~vv 231 (452)
++.-.+|+|.|.|+||..+++.+.++|++||
T Consensus 209 ~l~g~~vaVqG~GnVG~~~a~~L~~~GakvV 239 (421)
T 2yfq_A 209 KMEDAKIAVQGFGNVGTFTVKNIERQGGKVC 239 (421)
T ss_dssp CGGGSCEEEECCSHHHHHHHHHHHHTTCCEE
T ss_pred CccCCEEEEECcCHHHHHHHHHHHHCCCEEE
Confidence 5567889999999999999999999999874
No 158
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=83.65 E-value=0.56 Score=45.82 Aligned_cols=27 Identities=19% Similarity=0.238 Sum_probs=24.9
Q ss_pred CceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
-.+|+|+|+ |-+|+.|++.|+.+|++|
T Consensus 150 g~~vlI~Ga~g~iG~~~~~~a~~~Ga~V 177 (336)
T 4b7c_A 150 GETVVISGAAGAVGSVAGQIARLKGCRV 177 (336)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 367999998 999999999999999987
No 159
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=83.64 E-value=1.1 Score=42.74 Aligned_cols=29 Identities=24% Similarity=0.280 Sum_probs=24.1
Q ss_pred CCCceEEEEcCcH-HHHHHHHHHhcCCCEE
Q 012946 202 ICPLVFVFTGSGH-ASIAAQELFKLLPHTF 230 (452)
Q Consensus 202 i~p~kv~V~G~G~-vg~gAi~~a~~LGa~v 230 (452)
+.-.+++|+|++. .|++....+-+.|+.|
T Consensus 5 L~gKvalVTGas~GIG~aiA~~la~~Ga~V 34 (254)
T 4fn4_A 5 LKNKVVIVTGAGSGIGRAIAKKFALNDSIV 34 (254)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEE
Confidence 3457899999954 8888888888999988
No 160
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=83.63 E-value=0.79 Score=45.31 Aligned_cols=27 Identities=11% Similarity=0.112 Sum_probs=24.2
Q ss_pred CceEEEE-cCcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFT-GSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~-G~G~vg~gAi~~a~~LGa~v 230 (452)
..+|+|+ |+|.+|+.+++.|+.+|++|
T Consensus 168 g~~VlV~Gg~g~iG~~~~~~a~~~Ga~V 195 (353)
T 4dup_A 168 GESVLIHGGTSGIGTTAIQLARAFGAEV 195 (353)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEE
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHcCCEE
Confidence 4678999 57999999999999999987
No 161
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=83.50 E-value=0.78 Score=44.96 Aligned_cols=26 Identities=8% Similarity=0.036 Sum_probs=24.7
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
+||+|+|+|.+|+-++..|.+.|+.|
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v 27 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKV 27 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCE
Confidence 68999999999999999999999977
No 162
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=83.34 E-value=3.3 Score=42.81 Aligned_cols=37 Identities=16% Similarity=0.321 Sum_probs=29.7
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE----eCCCChhhHH
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF----VDPSRLPELF 240 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v----v~~~~l~~~~ 240 (452)
.-++.|+|.|.+|+.-...+.+.|..| ++++..+++.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~ 48 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLH 48 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHT
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHh
Confidence 467999999999999999898999977 4455556655
No 163
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=82.99 E-value=2.2 Score=41.76 Aligned_cols=28 Identities=11% Similarity=0.160 Sum_probs=24.4
Q ss_pred CCceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 203 CPLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 203 ~p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
-|.||.|+|+|..|..-...+.+-|..|
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V 40 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEV 40 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeE
Confidence 4789999999999998888888889877
No 164
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=82.78 E-value=1.9 Score=43.08 Aligned_cols=47 Identities=11% Similarity=0.068 Sum_probs=34.1
Q ss_pred hhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEeeecCCCCeee
Q 012946 299 EKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLTCDMEGSIEI 353 (452)
Q Consensus 299 ~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs~D~gG~iE~ 353 (452)
++.+..+||||+|.--+...| ++..+ .+++|. .|+|++.+.-+..|+
T Consensus 189 ~eav~~aDiVi~aTps~~~~p-vl~~~---~l~~G~----~V~~vgs~~p~~~El 235 (350)
T 1x7d_A 189 AEAVKGVDIITTVTADKAYAT-IITPD---MLEPGM----HLNAVGGDCPGKTEL 235 (350)
T ss_dssp HHHHTTCSEEEECCCCSSEEE-EECGG---GCCTTC----EEEECSCCBTTBEEE
T ss_pred HHHHhcCCEEEEeccCCCCCc-eecHH---HcCCCC----EEEECCCCCCCceee
Confidence 456778999999987653234 45544 358999 999999877667776
No 165
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=82.72 E-value=0.95 Score=46.37 Aligned_cols=35 Identities=26% Similarity=0.352 Sum_probs=28.9
Q ss_pred cCCCCCCCCceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 196 EGLPSGICPLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 196 ~G~~~~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
.|++..-.+.+|+|||+|.+|+.|+..+.+.|..|
T Consensus 25 ~~~~~~~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v 59 (498)
T 2iid_A 25 NGLKATSNPKHVVIVGAGMAGLSAAYVLAGAGHQV 59 (498)
T ss_dssp HCSCCCSSCCEEEEECCBHHHHHHHHHHHHHTCEE
T ss_pred cCCCCCCCCCCEEEECCCHHHHHHHHHHHhCCCeE
Confidence 34443335789999999999999999999999976
No 166
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=82.64 E-value=2.1 Score=42.58 Aligned_cols=35 Identities=11% Similarity=0.229 Sum_probs=28.5
Q ss_pred CCceEEEEcC-cHHHHHHHHHHhcCCCEE---eCCCChh
Q 012946 203 CPLVFVFTGS-GHASIAAQELFKLLPHTF---VDPSRLP 237 (452)
Q Consensus 203 ~p~kv~V~G~-G~vg~gAi~~a~~LGa~v---v~~~~l~ 237 (452)
+..+|+|+|+ |.+|+.|++.|+.+|++| +++++++
T Consensus 164 ~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~ 202 (371)
T 3gqv_A 164 KPVYVLVYGGSTATATVTMQMLRLSGYIPIATCSPHNFD 202 (371)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECGGGHH
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCHHHHH
Confidence 4568999999 999999999999999977 4444444
No 167
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=82.41 E-value=1 Score=42.89 Aligned_cols=26 Identities=12% Similarity=-0.103 Sum_probs=22.7
Q ss_pred ceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
.+|+|+|+ +-.|+.....+.+.|+.|
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga~V 29 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKV 29 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEE
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEE
Confidence 46899998 559999999999999988
No 168
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=82.39 E-value=2.7 Score=37.79 Aligned_cols=26 Identities=15% Similarity=0.019 Sum_probs=23.8
Q ss_pred ceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
.+|+|+|+ |.+|...++.+.+.|+.|
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V 31 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEV 31 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEE
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEE
Confidence 68999996 999999999999999987
No 169
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=81.75 E-value=2.3 Score=39.76 Aligned_cols=26 Identities=8% Similarity=-0.012 Sum_probs=24.3
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
.+|+|+|+|-+|..-++.+.+.|..|
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V 31 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRI 31 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEE
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEE
Confidence 68999999999999999999999987
No 170
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=81.64 E-value=0.58 Score=44.80 Aligned_cols=26 Identities=12% Similarity=0.156 Sum_probs=23.4
Q ss_pred ceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
.+|.|+|+ |+.|..-+..+.+.|..|
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V 38 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHL 38 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEE
Confidence 58999999 999999888888888876
No 171
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=81.60 E-value=1.4 Score=46.37 Aligned_cols=35 Identities=17% Similarity=0.328 Sum_probs=30.5
Q ss_pred cCCCCCCCCceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 196 EGLPSGICPLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 196 ~G~~~~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
.|+..++...+|+|-|.|+||..|++.+.++||+|
T Consensus 236 ~G~~~~l~g~tVaVQG~GNVG~~aa~~L~e~GakV 270 (501)
T 3mw9_A 236 LGMTPGFGDKTFVVQGFGNVGLHSMRYLHRFGAKC 270 (501)
T ss_dssp TTCCSSSTTCEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred cCCCCCcCCCEEEEECCCHHHHHHHHHHHHCCCEE
Confidence 35434678899999999999999999999999987
No 172
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=81.59 E-value=0.22 Score=47.63 Aligned_cols=25 Identities=12% Similarity=0.044 Sum_probs=22.1
Q ss_pred eEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 206 VFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 206 kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
+|.|+|+|..|..-+..+.+.|..|
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V 26 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPL 26 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCE
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEE
Confidence 6999999999999888888888866
No 173
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=81.39 E-value=3.1 Score=39.26 Aligned_cols=30 Identities=10% Similarity=-0.031 Sum_probs=25.6
Q ss_pred CCCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
.+...+++|+|+ |-.|+.....+.+.|+.|
T Consensus 12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~~V 42 (280)
T 3pgx_A 12 SLQGRVAFITGAARGQGRSHAVRLAAEGADI 42 (280)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEE
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEE
Confidence 456678999998 669999999999999987
No 174
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=81.16 E-value=0.99 Score=46.74 Aligned_cols=26 Identities=19% Similarity=0.261 Sum_probs=24.1
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
+||.|+|+|.+|+.-...+.+.|..|
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V 28 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANV 28 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEE
Confidence 58999999999999999999999987
No 175
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=81.14 E-value=10 Score=37.10 Aligned_cols=101 Identities=18% Similarity=0.232 Sum_probs=67.3
Q ss_pred CCCCceEEEEcC---cHHHHHHHHHHhcC-CCEE--eCCCChh---hHHhhhCCCCCccccCCCCceeEEEeeeeecccc
Q 012946 201 GICPLVFVFTGS---GHASIAAQELFKLL-PHTF--VDPSRLP---ELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENM 271 (452)
Q Consensus 201 ~i~p~kv~V~G~---G~vg~gAi~~a~~L-Ga~v--v~~~~l~---~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~ 271 (452)
.+.-.+|+++|- ++|+..-+..+..+ |+++ +.|+.++ ++.+ ..|.+ +
T Consensus 146 ~l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~~~~~~~~~-----------~~g~~---~---------- 201 (299)
T 1pg5_A 146 TIDGLVFALLGDLKYARTVNSLLRILTRFRPKLVYLISPQLLRARKEILD-----------ELNYP---V---------- 201 (299)
T ss_dssp CSTTCEEEEEECCSSCHHHHHHHHHGGGSCCSEEEEECCGGGCCCHHHHT-----------TCCSC---E----------
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCchhcCCHHHHH-----------HcCCe---E----------
Confidence 567799999999 59999999999999 9987 7787662 1111 01111 0
Q ss_pred cccCCCCCCCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCCC-----------CcccCHHHHHHhhcCCCCeEEE
Q 012946 272 VEPKDSSRAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQF-----------PRLLSTQQLRDLAQKGCPLVGI 340 (452)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~~-----------P~Lit~e~l~~mk~gs~~l~vI 340 (452)
....++ .+.++.+|||++..-...+. |.-||.+.++.+|+.. |
T Consensus 202 -------------~~~~d~--------~eav~~aDvvyt~~~q~er~~~~~~~~~~~~~y~v~~~~l~~a~~~a-----i 255 (299)
T 1pg5_A 202 -------------KEVENP--------FEVINEVDVLYVTRIQKERFVDEMEYEKIKGSYIVSLDLANKMKKDS-----I 255 (299)
T ss_dssp -------------EEESCG--------GGTGGGCSEEEEECCCSTTSSCHHHHHHHGGGGSBCHHHHHTSCTTC-----E
T ss_pred -------------EEeCCH--------HHHhcCCCEEEeCCcccccccCHHHHHHhhcCcccCHHHHHhcCCCC-----E
Confidence 011122 45788999999986544343 6778999988887765 5
Q ss_pred EEeeecCCCCeee
Q 012946 341 SDLTCDMEGSIEI 353 (452)
Q Consensus 341 vDvs~D~gG~iE~ 353 (452)
+ +=|-+- +.|+
T Consensus 256 ~-mH~lPr-g~EI 266 (299)
T 1pg5_A 256 I-LHPLPR-VNEI 266 (299)
T ss_dssp E-ECCSCC-SSSB
T ss_pred E-ECCCCC-CCcc
Confidence 5 666663 3555
No 176
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=80.98 E-value=1.9 Score=38.90 Aligned_cols=26 Identities=12% Similarity=0.164 Sum_probs=23.2
Q ss_pred ceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
++|+|+|+ |..|...++.+.+.|+.|
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V 27 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQI 27 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEE
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 37999995 999999999999999987
No 177
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=80.90 E-value=4.4 Score=39.78 Aligned_cols=44 Identities=14% Similarity=0.189 Sum_probs=29.9
Q ss_pred hhhcCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEeeecCCCCeee
Q 012946 299 EKIAPYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLTCDMEGSIEI 353 (452)
Q Consensus 299 ~~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs~D~gG~iE~ 353 (452)
++.+ .+||||+|.-- ..|. +..+ .+++|. .|+|++.+.-+.-|+
T Consensus 183 ~e~v-~aDvVi~aTp~--~~pv-~~~~---~l~~G~----~V~~ig~~~p~~~el 226 (322)
T 1omo_A 183 EEAS-RCDVLVTTTPS--RKPV-VKAE---WVEEGT----HINAIGADGPGKQEL 226 (322)
T ss_dssp HHHT-SSSEEEECCCC--SSCC-BCGG---GCCTTC----EEEECSCCSTTCCCB
T ss_pred HHHh-CCCEEEEeeCC--CCce-ecHH---HcCCCe----EEEECCCCCCCcccc
Confidence 4566 89999999864 3454 4444 458998 899996655445554
No 178
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=80.88 E-value=1.4 Score=46.08 Aligned_cols=23 Identities=26% Similarity=0.128 Sum_probs=20.4
Q ss_pred CceEEEEcCcHHHHHHHHHHhcC
Q 012946 204 PLVFVFTGSGHASIAAQELFKLL 226 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~L 226 (452)
..+|+|+|+|.+|++++..+.+-
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~ 35 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEK 35 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHhC
Confidence 47899999999999999988763
No 179
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=80.77 E-value=2.5 Score=41.67 Aligned_cols=27 Identities=19% Similarity=0.102 Sum_probs=23.3
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCC-EE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPH-TF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa-~v 230 (452)
..||.|+|+|.+|.+....+...|. .+
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v 31 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDV 31 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeE
Confidence 4699999999999998888888777 44
No 180
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=80.75 E-value=0.3 Score=46.62 Aligned_cols=27 Identities=15% Similarity=0.145 Sum_probs=23.1
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
..+|.|+|+|..|..-+..+.+.|..|
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V 29 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARAGHQL 29 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHTTCEE
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCEE
Confidence 368999999999999888888888876
No 181
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=80.69 E-value=0.52 Score=47.14 Aligned_cols=27 Identities=11% Similarity=0.028 Sum_probs=23.7
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
..+|.|||.|..|..-...+++.|..|
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~G~~V 34 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAANHSV 34 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred CCEEEEEeecHHHHHHHHHHHHCCCEE
Confidence 467999999999999888888889866
No 182
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=80.62 E-value=1.6 Score=45.41 Aligned_cols=30 Identities=20% Similarity=0.149 Sum_probs=28.1
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
++.-.+|+|-|.|+||..|++.+.++||+|
T Consensus 232 ~l~Gk~vaVQG~GnVG~~aa~~L~e~Gakv 261 (450)
T 4fcc_A 232 GFEGMRVSVSGSGNVAQYAIEKAMEFGARV 261 (450)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred CcCCCEEEEeCCChHHHHHHHHHHhcCCeE
Confidence 667899999999999999999999999987
No 183
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=80.62 E-value=11 Score=37.00 Aligned_cols=65 Identities=14% Similarity=0.179 Sum_probs=43.2
Q ss_pred CCCcccccccccCccHHHHHHHHHHhhHHHHhcCCCCCCCCceEEEEcCc--HHHHHHHHHHhcCCCEE--eCCCCh
Q 012946 164 STPFLTLGAAYMYPSLAAAKAAIISVGEEIATEGLPSGICPLVFVFTGSG--HASIAAQELFKLLPHTF--VDPSRL 236 (452)
Q Consensus 164 ~~P~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~G~~~~i~p~kv~V~G~G--~vg~gAi~~a~~LGa~v--v~~~~l 236 (452)
..|..+-.-.+.+++ |++..+-.+-+. -| .+.-.+|+++|-| +++..-+..+..+|+++ +.|+.+
T Consensus 116 ~vPVINa~~~~~HPt--QaLaDl~Ti~e~---~g---~l~gl~va~vGD~~~rva~Sl~~~~~~~g~~v~~~~P~~~ 184 (307)
T 2i6u_A 116 TVPVINALSDEFHPC--QVLADLQTIAER---KG---ALRGLRLSYFGDGANNMAHSLLLGGVTAGIHVTVAAPEGF 184 (307)
T ss_dssp SSCEEESCCSSCCHH--HHHHHHHHHHHH---HS---CCTTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEECCTTS
T ss_pred CCCEEcCCCCCcCcc--HHHHHHHHHHHH---hC---CcCCeEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccc
Confidence 467777654333333 222222222221 12 5677899999996 99999999999999987 778765
No 184
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=80.54 E-value=1.3 Score=45.47 Aligned_cols=26 Identities=12% Similarity=0.123 Sum_probs=23.5
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
++|.|+|+|.+|+.-...+.+.|..|
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V 26 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEV 26 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEE
Confidence 37999999999999888888899987
No 185
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=80.43 E-value=0.81 Score=45.25 Aligned_cols=27 Identities=11% Similarity=-0.033 Sum_probs=24.4
Q ss_pred CceEEEEc-CcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTG-SGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G-~G~vg~gAi~~a~~LGa~v 230 (452)
-.+|+|+| +|.+|+.+++.|+.+|+.|
T Consensus 163 g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V 190 (354)
T 2j8z_A 163 GDYVLIHAGLSGVGTAAIQLTRMAGAIP 190 (354)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEE
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCEE
Confidence 36799999 6999999999999999987
No 186
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=80.36 E-value=7.1 Score=37.13 Aligned_cols=30 Identities=10% Similarity=-0.066 Sum_probs=25.5
Q ss_pred CCCCceEEEEcCcH-HHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGSGH-ASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~G~-vg~gAi~~a~~LGa~v 230 (452)
++.-.+++|+|++. .|+.....+-+.||.|
T Consensus 6 ~L~GKvalVTGas~GIG~aiA~~la~~Ga~V 36 (247)
T 4hp8_A 6 SLEGRKALVTGANTGLGQAIAVGLAAAGAEV 36 (247)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHcCCEE
Confidence 45567899999955 9999999999999987
No 187
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=80.35 E-value=2.1 Score=40.25 Aligned_cols=26 Identities=19% Similarity=0.261 Sum_probs=22.2
Q ss_pred ceEEEEcC-cHHHHHHHHHHhcC-CCEE
Q 012946 205 LVFVFTGS-GHASIAAQELFKLL-PHTF 230 (452)
Q Consensus 205 ~kv~V~G~-G~vg~gAi~~a~~L-Ga~v 230 (452)
++|+|+|+ |.+|...++.+.+. |+.|
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V 28 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHF 28 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTE
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcE
Confidence 36999997 99999999998887 8866
No 188
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=80.34 E-value=1.5 Score=43.06 Aligned_cols=26 Identities=15% Similarity=0.137 Sum_probs=21.8
Q ss_pred CCceEEEEcCcHHHHHHHHHHhcCCC
Q 012946 203 CPLVFVFTGSGHASIAAQELFKLLPH 228 (452)
Q Consensus 203 ~p~kv~V~G~G~vg~gAi~~a~~LGa 228 (452)
.+.||+|+|+|.+|...+-.+...|.
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~ 31 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQT 31 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC
Confidence 46899999999999988887777775
No 189
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=80.33 E-value=1.6 Score=42.75 Aligned_cols=27 Identities=11% Similarity=-0.048 Sum_probs=25.2
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
..+|+|+|+|.+|+.|++.|+.+|++|
T Consensus 177 g~~VlV~GaG~vG~~a~qla~~~Ga~V 203 (348)
T 3two_A 177 GTKVGVAGFGGLGSMAVKYAVAMGAEV 203 (348)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHTTCEE
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCeE
Confidence 467999999999999999999999987
No 190
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=80.03 E-value=1.4 Score=40.11 Aligned_cols=26 Identities=4% Similarity=-0.027 Sum_probs=23.8
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
++|+|+|+|.+|...++.+...|..|
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v 26 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGV 26 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeE
Confidence 47999999999999999999999976
No 191
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=80.01 E-value=3.7 Score=38.97 Aligned_cols=27 Identities=19% Similarity=0.113 Sum_probs=23.5
Q ss_pred CceEEEEcCcH-HHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGSGH-ASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~-vg~gAi~~a~~LGa~v 230 (452)
-.+++|+|++. .|+.....+.+.|+.|
T Consensus 11 GK~alVTGas~GIG~aia~~la~~Ga~V 38 (242)
T 4b79_A 11 GQQVLVTGGSSGIGAAIAMQFAELGAEV 38 (242)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEE
Confidence 47889999954 8999999999999987
No 192
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=80.01 E-value=1.7 Score=40.83 Aligned_cols=39 Identities=15% Similarity=0.160 Sum_probs=31.6
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEE--eCCCChhhH
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTF--VDPSRLPEL 239 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~~~l~~~ 239 (452)
.+...+|+|+|+|.+|...+..+...||.| ++|+.-+++
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l 68 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEI 68 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHH
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHH
Confidence 456688999999999999999999999966 676543333
No 193
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=79.96 E-value=2.5 Score=39.50 Aligned_cols=28 Identities=11% Similarity=0.019 Sum_probs=24.0
Q ss_pred CCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 203 CPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 203 ~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
...+++|+|+ |-.|+..++.+.+.|+.|
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V 34 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEGFTV 34 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEE
Confidence 4578999998 669999999999999987
No 194
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=79.79 E-value=1.2 Score=42.20 Aligned_cols=26 Identities=8% Similarity=0.052 Sum_probs=22.8
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCC--EE
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPH--TF 230 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa--~v 230 (452)
.+|.|+|+|..|..-+..+.+.|. .|
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V 29 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKI 29 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEE
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEE
Confidence 379999999999999898988887 55
No 195
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=79.67 E-value=0.84 Score=47.91 Aligned_cols=27 Identities=4% Similarity=-0.186 Sum_probs=23.8
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
..+|.|||.|+.|..-+..+.+.|..|
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V 30 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVV 30 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEE
Confidence 367999999999999888888889876
No 196
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=79.65 E-value=2.3 Score=37.36 Aligned_cols=26 Identities=8% Similarity=0.038 Sum_probs=23.7
Q ss_pred ceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
.+|+|+|+ |.+|...++.+.+.|++|
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V 30 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEV 30 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeE
Confidence 68999998 999999999999999877
No 197
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=79.63 E-value=1.3 Score=43.13 Aligned_cols=27 Identities=15% Similarity=0.223 Sum_probs=24.4
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
+.+|.|+|+|..|..-...+.+.|..|
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V 30 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSV 30 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEE
Confidence 478999999999999988898899977
No 198
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=79.57 E-value=0.53 Score=46.66 Aligned_cols=27 Identities=15% Similarity=-0.055 Sum_probs=23.5
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
..+|.|||.|..|..-+..+...|..|
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~G~~V 42 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDSGVDV 42 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred CCEEEEECchHHHHHHHHHHHHCcCEE
Confidence 467999999999999888888888865
No 199
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=79.45 E-value=1.8 Score=44.53 Aligned_cols=29 Identities=10% Similarity=0.135 Sum_probs=27.6
Q ss_pred CCCceEEEEcCcHHHHHHHHHHhc-CCCEE
Q 012946 202 ICPLVFVFTGSGHASIAAQELFKL-LPHTF 230 (452)
Q Consensus 202 i~p~kv~V~G~G~vg~gAi~~a~~-LGa~v 230 (452)
+.-.+|.|+|.|++|+.+++.++. +|++|
T Consensus 210 l~gktvgI~G~G~VG~~vA~~l~~~~G~kV 239 (419)
T 1gtm_A 210 LKGKTIAIQGYGNAGYYLAKIMSEDFGMKV 239 (419)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTCCEE
T ss_pred cCCCEEEEEcCCHHHHHHHHHHHHhcCCEE
Confidence 678999999999999999999999 99988
No 200
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=79.43 E-value=1.4 Score=41.70 Aligned_cols=26 Identities=12% Similarity=0.087 Sum_probs=22.9
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
++|.|+|+|..|..-+..+.+.|.+|
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V 26 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYL 26 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEE
Confidence 37999999999999888888889876
No 201
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=79.39 E-value=2.7 Score=39.32 Aligned_cols=30 Identities=17% Similarity=0.117 Sum_probs=25.2
Q ss_pred CCCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
.+...+++|+|+ |-.|+...+.+.+.|+.|
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V 39 (256)
T 3gaf_A 9 HLNDAVAIVTGAAAGIGRAIAGTFAKAGASV 39 (256)
T ss_dssp CCTTCEEEECSCSSHHHHHHHHHHHHHTCEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 455678999998 669999888888999987
No 202
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=79.17 E-value=4 Score=37.92 Aligned_cols=28 Identities=11% Similarity=-0.019 Sum_probs=24.3
Q ss_pred CCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 203 CPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 203 ~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
...+|+|+|+ |-.|+..++.+.+.|+.|
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V 32 (254)
T 1hdc_A 4 SGKTVIITGGARGLGAEAARQAVAAGARV 32 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEE
Confidence 3467999998 789999999999999987
No 203
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=78.93 E-value=0.97 Score=43.75 Aligned_cols=30 Identities=20% Similarity=0.192 Sum_probs=25.5
Q ss_pred CCCCceEEEEcCcH-HHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGSGH-ASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~G~-vg~gAi~~a~~LGa~v 230 (452)
.+.-.+++|+|++. .|+.....|.+.||.|
T Consensus 26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V 56 (273)
T 4fgs_A 26 RLNAKIAVITGATSGIGLAAAKRFVAEGARV 56 (273)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTCEE
T ss_pred hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEE
Confidence 35567899999954 9999999999999988
No 204
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=78.78 E-value=2.1 Score=44.30 Aligned_cols=28 Identities=14% Similarity=0.214 Sum_probs=23.4
Q ss_pred CCCceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 202 ICPLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 202 i~p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
..-+||.|+|+|.+|+.-...+.+ |..|
T Consensus 34 ~~~mkIaVIGlG~mG~~lA~~La~-G~~V 61 (432)
T 3pid_A 34 SEFMKITISGTGYVGLSNGVLIAQ-NHEV 61 (432)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHT-TSEE
T ss_pred cCCCEEEEECcCHHHHHHHHHHHc-CCeE
Confidence 345799999999999988777777 9977
No 205
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=78.62 E-value=1.1 Score=45.63 Aligned_cols=24 Identities=8% Similarity=0.051 Sum_probs=21.5
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCC
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPH 228 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa 228 (452)
.+|+|+|+|.+|...++.+.+.|.
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~ 25 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNRE 25 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC
Confidence 479999999999999999999883
No 206
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=78.58 E-value=4.4 Score=37.49 Aligned_cols=29 Identities=14% Similarity=0.055 Sum_probs=24.5
Q ss_pred CCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 202 ICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 202 i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
+...+++|+|+ |-.|+..+..+.+.|+.|
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V 34 (247)
T 2jah_A 5 LQGKVALITGASSGIGEATARALAAEGAAV 34 (247)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 34578999998 779999999999999987
No 207
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=78.42 E-value=1.5 Score=43.53 Aligned_cols=29 Identities=14% Similarity=0.109 Sum_probs=25.6
Q ss_pred CCCceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 202 ICPLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 202 i~p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
-.+..|+|+|+|.+|+.++..|.+.|..|
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V 49 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQSGIDC 49 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCE
Confidence 35789999999999999999999999977
No 208
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=78.34 E-value=2.9 Score=38.98 Aligned_cols=29 Identities=21% Similarity=0.032 Sum_probs=24.6
Q ss_pred CCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 202 ICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 202 i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
+...+++|+|+ |-.|+...+.+.+.|+.|
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V 35 (259)
T 4e6p_A 6 LEGKSALITGSARGIGRAFAEAYVREGATV 35 (259)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEE
Confidence 34578999998 779999999999999987
No 209
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=78.30 E-value=1.1 Score=45.87 Aligned_cols=26 Identities=12% Similarity=0.065 Sum_probs=23.9
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
.+|+|||+|.+|+.|+..|.+.|..|
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V 27 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPV 27 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCE
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcE
Confidence 36999999999999999999999976
No 210
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=78.09 E-value=2.3 Score=43.90 Aligned_cols=26 Identities=12% Similarity=0.128 Sum_probs=23.7
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
.+|+|+|+|.+|...+..+.+.|+.|
T Consensus 4 k~VlViGaG~iG~~ia~~L~~~G~~V 29 (450)
T 1ff9_A 4 KSVLMLGSGFVTRPTLDVLTDSGIKV 29 (450)
T ss_dssp CEEEEECCSTTHHHHHHHHHTTTCEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCcCEE
Confidence 57999999999999999999999876
No 211
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=77.96 E-value=2.1 Score=39.96 Aligned_cols=30 Identities=13% Similarity=-0.006 Sum_probs=26.1
Q ss_pred CCCCceEEEEcC-cH-HHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGS-GH-ASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~-G~-vg~gAi~~a~~LGa~v 230 (452)
.+...+|+|+|+ |. .|+..++.+.+.|+.|
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V 50 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALLEGADV 50 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHCCCEE
Confidence 456789999999 85 9999999999999987
No 212
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=77.90 E-value=2 Score=41.44 Aligned_cols=28 Identities=7% Similarity=0.010 Sum_probs=25.6
Q ss_pred CCceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 203 CPLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 203 ~p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
+..+|+|+|+|.+|+.|++.|+.+|++|
T Consensus 142 ~g~~VlV~GaG~vG~~a~qlak~~Ga~V 169 (315)
T 3goh_A 142 KQREVLIVGFGAVNNLLTQMLNNAGYVV 169 (315)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEE
Confidence 3468999999999999999999999977
No 213
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=77.71 E-value=1.2 Score=46.28 Aligned_cols=26 Identities=4% Similarity=-0.190 Sum_probs=23.1
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
++|.|||+|+.|..-+..+.+.|..|
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V 28 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVV 28 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeE
Confidence 57999999999999888888889876
No 214
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=77.68 E-value=4.4 Score=37.67 Aligned_cols=29 Identities=14% Similarity=0.049 Sum_probs=24.8
Q ss_pred CCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 202 ICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 202 i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
+...+++|+|+ |-.|+..+..+.+.|+.|
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V 39 (263)
T 3ak4_A 10 LSGRKAIVTGGSKGIGAAIARALDKAGATV 39 (263)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEE
Confidence 34578999998 779999999999999987
No 215
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=77.59 E-value=2.7 Score=39.39 Aligned_cols=26 Identities=12% Similarity=0.217 Sum_probs=23.9
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
.+|+|+|+|-+|..-++.+.+.|++|
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V 29 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEV 29 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEE
Confidence 57999999999999999999999876
No 216
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=77.49 E-value=5 Score=40.08 Aligned_cols=36 Identities=11% Similarity=0.172 Sum_probs=31.4
Q ss_pred CCCCceEEEEcCc--HHHHHHHHHHhcCCCEE--eCCCCh
Q 012946 201 GICPLVFVFTGSG--HASIAAQELFKLLPHTF--VDPSRL 236 (452)
Q Consensus 201 ~i~p~kv~V~G~G--~vg~gAi~~a~~LGa~v--v~~~~l 236 (452)
.+.-.+|+++|-| +++..-+..+..+|+++ +.|+.+
T Consensus 152 ~l~gl~va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~ 191 (335)
T 1dxh_A 152 PLHDISYAYLGDARNNMGNSLLLIGAKLGMDVRIAAPKAL 191 (335)
T ss_dssp CGGGCEEEEESCCSSHHHHHHHHHHHHTTCEEEEECCGGG
T ss_pred CcCCeEEEEecCCccchHHHHHHHHHHcCCEEEEECCccc
Confidence 4567899999997 99999999999999987 778765
No 217
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=77.44 E-value=3.3 Score=39.30 Aligned_cols=30 Identities=23% Similarity=0.201 Sum_probs=25.3
Q ss_pred CCCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
.+...+++|+|+ |-.|+..++.+.+.|+.|
T Consensus 24 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~V 54 (277)
T 4dqx_A 24 DLNQRVCIVTGGGSGIGRATAELFAKNGAYV 54 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEE
Confidence 345678999998 679999999999999987
No 218
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=77.42 E-value=12 Score=37.14 Aligned_cols=36 Identities=17% Similarity=0.248 Sum_probs=31.4
Q ss_pred CCCCceEEEEcCc--HHHHHHHHHHhcCCCEE--eCCCCh
Q 012946 201 GICPLVFVFTGSG--HASIAAQELFKLLPHTF--VDPSRL 236 (452)
Q Consensus 201 ~i~p~kv~V~G~G--~vg~gAi~~a~~LGa~v--v~~~~l 236 (452)
.+.-.+|+++|-| +|+..-+..+..+|+++ +.|+.+
T Consensus 164 ~l~gl~va~vGD~~~rva~Sl~~~~~~~G~~v~~~~P~~~ 203 (325)
T 1vlv_A 164 RLKGVKVVFMGDTRNNVATSLMIACAKMGMNFVACGPEEL 203 (325)
T ss_dssp CSTTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEESCGGG
T ss_pred CcCCcEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccc
Confidence 5677899999996 99999999999999987 778765
No 219
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=77.35 E-value=1.8 Score=40.95 Aligned_cols=30 Identities=7% Similarity=0.089 Sum_probs=26.1
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE--eCC
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF--VDP 233 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~ 233 (452)
..+|+|+|+|.+|+.|+..|.+.|..| ++.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~ 38 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIES 38 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEc
Confidence 468999999999999999999999966 554
No 220
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=77.19 E-value=1.4 Score=42.72 Aligned_cols=25 Identities=12% Similarity=0.049 Sum_probs=23.5
Q ss_pred eEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 206 VFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 206 kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
-|+|+|+|.+|+.|+..|.+.|+.|
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V 30 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKT 30 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcE
Confidence 4899999999999999999999977
No 221
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=77.02 E-value=0.85 Score=42.69 Aligned_cols=24 Identities=17% Similarity=0.045 Sum_probs=21.3
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCC
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPH 228 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa 228 (452)
.+|.|||+|+.|..-...+.+.|.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~ 26 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNI 26 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTS
T ss_pred CeEEEECccHHHHHHHHHHHhCCC
Confidence 479999999999998888888886
No 222
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=76.92 E-value=1.3 Score=41.97 Aligned_cols=26 Identities=23% Similarity=0.082 Sum_probs=23.5
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
-.|+|||+|.+|+.|+..|.++|..|
T Consensus 5 yDvvIIG~GpAGl~AA~~la~~g~~v 30 (314)
T 4a5l_A 5 HDVVIIGSGPAAHTAAIYLGRSSLKP 30 (314)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCE
Confidence 35999999999999999999999976
No 223
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=76.91 E-value=0.98 Score=47.45 Aligned_cols=27 Identities=11% Similarity=-0.178 Sum_probs=23.8
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
..+|.|||.|+.|..-+..+.+.|..|
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V 36 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTV 36 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEE
Confidence 467999999999999888888889876
No 224
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=76.90 E-value=4.5 Score=37.82 Aligned_cols=29 Identities=7% Similarity=-0.017 Sum_probs=24.6
Q ss_pred CCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 202 ICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 202 i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
+...+++|+|+ |-.|+..++.+.+.|+.|
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V 34 (260)
T 1nff_A 5 LTGKVALVSGGARGMGASHVRAMVAEGAKV 34 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEE
Confidence 34568999997 779999999999999987
No 225
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=76.83 E-value=4.6 Score=37.91 Aligned_cols=31 Identities=19% Similarity=0.056 Sum_probs=26.0
Q ss_pred CCCCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 200 SGICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 200 ~~i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
..+...+++|+|+ |-.|+...+.+.+.|+.|
T Consensus 14 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V 45 (270)
T 3is3_A 14 GRLDGKVALVTGSGRGIGAAVAVHLGRLGAKV 45 (270)
T ss_dssp TCCTTCEEEESCTTSHHHHHHHHHHHHTTCEE
T ss_pred CCcCCCEEEEECCCchHHHHHHHHHHHCCCEE
Confidence 3556688999998 669999999999999987
No 226
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=76.83 E-value=4 Score=38.43 Aligned_cols=40 Identities=13% Similarity=0.164 Sum_probs=30.1
Q ss_pred CCCCceEEEEcC-cHHHHHHHHHHhcCCCEE----eCCCChhhHH
Q 012946 201 GICPLVFVFTGS-GHASIAAQELFKLLPHTF----VDPSRLPELF 240 (452)
Q Consensus 201 ~i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v----v~~~~l~~~~ 240 (452)
.+...+++|+|+ |-.|+...+.+.+.|+.| .+.+.+++..
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~ 52 (271)
T 3tzq_B 8 ELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAA 52 (271)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence 345678999998 779999999999999987 2344555554
No 227
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=76.68 E-value=5.7 Score=37.94 Aligned_cols=26 Identities=15% Similarity=0.281 Sum_probs=23.6
Q ss_pred ceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
++|+|+|+ |-+|..-++.+.+.|++|
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~~V 40 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGHDL 40 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEE
Confidence 58999997 999999999999999977
No 228
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=76.64 E-value=1.4 Score=46.02 Aligned_cols=28 Identities=7% Similarity=-0.183 Sum_probs=24.1
Q ss_pred CCceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 203 CPLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 203 ~p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
...+|.|||+|+.|..-+..+.+.|..|
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~~G~~V 41 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIESRGYTV 41 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHTTTCCE
T ss_pred CCCeEEEEccHHHHHHHHHHHHhCCCeE
Confidence 4578999999999999888888889876
No 229
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=76.44 E-value=5.2 Score=39.14 Aligned_cols=27 Identities=11% Similarity=0.006 Sum_probs=24.3
Q ss_pred CceEEEEcCcHHHHH-HHHHHhcCCCEE
Q 012946 204 PLVFVFTGSGHASIA-AQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~g-Ai~~a~~LGa~v 230 (452)
+.+|.|+|.|..|.+ ++..++++|+.|
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V 31 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEV 31 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEE
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEE
Confidence 578999999999996 677899999988
No 230
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=76.36 E-value=1.3 Score=46.06 Aligned_cols=30 Identities=13% Similarity=0.032 Sum_probs=27.8
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
++.-.+|+|-|.|+||..|++.+.++||++
T Consensus 236 ~l~g~~VaVQG~GnVG~~aa~~L~e~Gakv 265 (456)
T 3r3j_A 236 NLENKKCLVSGSGNVAQYLVEKLIEKGAIV 265 (456)
T ss_dssp CSTTCCEEEECCSHHHHHHHHHHHHHTCCB
T ss_pred CccCCEEEEECCCHHHHHHHHHHHHCCCEE
Confidence 567789999999999999999999999987
No 231
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=76.33 E-value=5 Score=36.40 Aligned_cols=27 Identities=7% Similarity=-0.045 Sum_probs=23.4
Q ss_pred CceEEEEcC-cHHHHHHHHHHhcCCC--EE
Q 012946 204 PLVFVFTGS-GHASIAAQELFKLLPH--TF 230 (452)
Q Consensus 204 p~kv~V~G~-G~vg~gAi~~a~~LGa--~v 230 (452)
..+|+|+|+ |-.|...++.+.+.|+ .|
T Consensus 18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V 47 (242)
T 2bka_A 18 NKSVFILGASGETGRVLLKEILEQGLFSKV 47 (242)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHHTCCSEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHcCCCCCEE
Confidence 357999996 9999999999999998 77
No 232
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=76.27 E-value=1.4 Score=41.93 Aligned_cols=28 Identities=18% Similarity=0.029 Sum_probs=25.5
Q ss_pred CCceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 203 CPLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 203 ~p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
...+|+|||+|.+|+.|+..|.+.|..|
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v 48 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIKP 48 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCE
Confidence 3678999999999999999999999966
No 233
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=76.24 E-value=3.2 Score=41.94 Aligned_cols=36 Identities=8% Similarity=-0.188 Sum_probs=29.3
Q ss_pred cCCCcEEEeccccCCCCCcccCHHHHHHh-hcCCCCeEEEEEeeecC
Q 012946 302 APYASAIINCIYWEKQFPRLLSTQQLRDL-AQKGCPLVGISDLTCDM 347 (452)
Q Consensus 302 ~~~~DIvIn~a~~~~~~P~Lit~e~l~~m-k~gs~~l~vIvDvs~D~ 347 (452)
+..+||++-|. |...+++.+... +.|. .|||+|+|.
T Consensus 62 ~~~~Dvvf~a~------~~~~s~~~a~~~~~~G~----~vIDlSa~~ 98 (366)
T 3pwk_A 62 FEGVDIALFSA------GSSTSAKYAPYAVKAGV----VVVDNTSYF 98 (366)
T ss_dssp TTTCSEEEECS------CHHHHHHHHHHHHHTTC----EEEECSSTT
T ss_pred hcCCCEEEECC------ChHhHHHHHHHHHHCCC----EEEEcCCcc
Confidence 45789999885 677888888776 7788 899999985
No 234
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=76.23 E-value=1.7 Score=40.46 Aligned_cols=26 Identities=12% Similarity=0.144 Sum_probs=24.0
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
.+|+|+|+|.+|+.|+..+.+.|..|
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v 28 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNI 28 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCE
Confidence 57999999999999999999999866
No 235
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=76.19 E-value=3.7 Score=38.11 Aligned_cols=30 Identities=13% Similarity=-0.005 Sum_probs=25.4
Q ss_pred CCCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
.+...+++|+|+ |-.|+...+.+.+.|+.|
T Consensus 3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V 33 (247)
T 3rwb_A 3 RLAGKTALVTGAAQGIGKAIAARLAADGATV 33 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CcCCCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 345578999998 679999999999999987
No 236
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=76.18 E-value=2 Score=43.88 Aligned_cols=28 Identities=14% Similarity=0.088 Sum_probs=25.5
Q ss_pred CCceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 203 CPLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 203 ~p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
.+.+|+|||+|.+|+.|+..|.+.|..|
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v 37 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKV 37 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCE
Confidence 3678999999999999999999999976
No 237
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=76.13 E-value=1.7 Score=40.03 Aligned_cols=30 Identities=17% Similarity=0.162 Sum_probs=26.1
Q ss_pred CCCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
..+..+|+|+|+ |-.|+..+..+.+.|+.|
T Consensus 11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V 41 (249)
T 3f9i_A 11 DLTGKTSLITGASSGIGSAIARLLHKLGSKV 41 (249)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEE
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCEE
Confidence 556788999998 779999999999999987
No 238
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=76.10 E-value=3.8 Score=39.22 Aligned_cols=24 Identities=13% Similarity=-0.013 Sum_probs=21.4
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCC
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPH 228 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa 228 (452)
.+|.|||+|+.|..-+..+.+-|.
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~ 27 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGY 27 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTC
T ss_pred CEEEEEcccHHHHHHHHHHHHCCC
Confidence 679999999999998888888776
No 239
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=76.05 E-value=2.3 Score=40.35 Aligned_cols=28 Identities=18% Similarity=0.042 Sum_probs=24.0
Q ss_pred CCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 203 CPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 203 ~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
...+++|+|+ |-.|+...+.+.+.|+.|
T Consensus 4 ~gk~~lVTGas~GIG~aia~~la~~G~~V 32 (281)
T 3zv4_A 4 TGEVALITGGASGLGRALVDRFVAEGARV 32 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEE
Confidence 3568999998 669999999999999987
No 240
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=76.03 E-value=3 Score=38.06 Aligned_cols=25 Identities=16% Similarity=0.236 Sum_probs=21.8
Q ss_pred eEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 206 VFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 206 kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
+|+|+|+ |-.|+..+..+.+.|+.|
T Consensus 3 ~vlVTGas~gIG~~~a~~l~~~G~~V 28 (230)
T 3guy_A 3 LIVITGASSGLGAELAKLYDAEGKAT 28 (230)
T ss_dssp CEEEESTTSHHHHHHHHHHHHTTCCE
T ss_pred EEEEecCCchHHHHHHHHHHHCCCEE
Confidence 5889988 679999999999999977
No 241
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=76.00 E-value=1.5 Score=42.91 Aligned_cols=24 Identities=21% Similarity=0.317 Sum_probs=21.1
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCC
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLP 227 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LG 227 (452)
..+|.|||+|+.|..-+..+.+.|
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G 45 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAG 45 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC
Confidence 468999999999998888888877
No 242
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=76.00 E-value=1.6 Score=40.63 Aligned_cols=29 Identities=14% Similarity=0.069 Sum_probs=24.7
Q ss_pred CCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 202 ICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 202 i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
+...+++|+|+ |-.|+..++.+.+.|+.|
T Consensus 4 l~~k~vlVTGas~giG~~ia~~l~~~G~~V 33 (253)
T 1hxh_A 4 LQGKVALVTGGASGVGLEVVKLLLGEGAKV 33 (253)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEE
Confidence 34568999998 789999999999999987
No 243
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=75.91 E-value=1.6 Score=41.52 Aligned_cols=26 Identities=15% Similarity=0.124 Sum_probs=23.6
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
--|+|||+|.+|+.|+..|.++|..|
T Consensus 7 yDvvIIG~GpAGl~aA~~l~~~g~~V 32 (312)
T 4gcm_A 7 FDIAIIGAGPAGMTAAVYASRANLKT 32 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCE
Confidence 35899999999999999999999976
No 244
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=75.87 E-value=2.1 Score=40.90 Aligned_cols=30 Identities=17% Similarity=0.056 Sum_probs=24.9
Q ss_pred CCCCceEEEEcCc-HHHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGSG-HASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~G-~vg~gAi~~a~~LGa~v 230 (452)
++.-.+++|+|++ -.|+.....+-+.|+.|
T Consensus 6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~V 36 (255)
T 4g81_D 6 DLTGKTALVTGSARGLGFAYAEGLAAAGARV 36 (255)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEE
Confidence 3455789999994 48999999999999988
No 245
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=75.82 E-value=1.3 Score=41.76 Aligned_cols=27 Identities=19% Similarity=0.025 Sum_probs=24.4
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
..+|+|+|+|.+|+.|+..+.+.|..|
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~g~~v 30 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRGGLKN 30 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHTCSC
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCe
Confidence 468999999999999999999999854
No 246
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=75.74 E-value=1.9 Score=43.00 Aligned_cols=26 Identities=19% Similarity=0.284 Sum_probs=23.9
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
.+|+|||+|.+|+.|+..|.+.|..|
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V 26 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEI 26 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeE
Confidence 36999999999999999999999977
No 247
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=75.58 E-value=3.4 Score=39.21 Aligned_cols=30 Identities=7% Similarity=-0.032 Sum_probs=25.4
Q ss_pred CCCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
.+...+++|+|+ |-.|+..++.+.+.|+.|
T Consensus 29 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V 59 (276)
T 3r1i_A 29 DLSGKRALITGASTGIGKKVALAYAEAGAQV 59 (276)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEE
Confidence 445678999998 679999999999999987
No 248
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=75.38 E-value=2.2 Score=40.66 Aligned_cols=30 Identities=17% Similarity=0.371 Sum_probs=26.0
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCCEE--eCCC
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPHTF--VDPS 234 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~~ 234 (452)
.+|+|+|+|.+|+.|+..|.+.|..| ++..
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~ 35 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRSGLSYVILDAE 35 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSCCEEEECCS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECC
Confidence 57999999999999999999999976 5443
No 249
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=75.37 E-value=1.3 Score=42.07 Aligned_cols=30 Identities=17% Similarity=0.044 Sum_probs=25.5
Q ss_pred CCCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
++...+++|+|+ |-.|+...+.+.+.|+.|
T Consensus 23 ~l~gk~~lVTGas~gIG~aia~~la~~G~~V 53 (271)
T 4ibo_A 23 DLGGRTALVTGSSRGLGRAMAEGLAVAGARI 53 (271)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEE
Confidence 345678999998 679999999999999987
No 250
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=75.33 E-value=2 Score=42.60 Aligned_cols=25 Identities=16% Similarity=0.213 Sum_probs=23.5
Q ss_pred eEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 206 VFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 206 kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
+|+|||+|.+|+.|+..|.+.|..|
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~V 26 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKAGHEV 26 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCEE
T ss_pred cEEEECCCHHHHHHHHHHHhCCCce
Confidence 6999999999999999999999977
No 251
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=75.23 E-value=5.7 Score=39.04 Aligned_cols=36 Identities=17% Similarity=0.235 Sum_probs=31.2
Q ss_pred CCCCceEEEEcC-cHHHHHHHHHHhcCCCEE--eCCCCh
Q 012946 201 GICPLVFVFTGS-GHASIAAQELFKLLPHTF--VDPSRL 236 (452)
Q Consensus 201 ~i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v--v~~~~l 236 (452)
++.-.+|+++|- ++++..-+..+..+|+++ +.|+.+
T Consensus 151 ~l~gl~ia~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~ 189 (301)
T 2ef0_A 151 GLAGLEVAWVGDGNNVLNSLLEVAPLAGLKVRVATPKGY 189 (301)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTC
T ss_pred CcCCcEEEEECCCchhHHHHHHHHHHcCCEEEEECCchh
Confidence 567799999999 889999999999999987 778665
No 252
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=75.16 E-value=2.2 Score=42.25 Aligned_cols=27 Identities=15% Similarity=0.130 Sum_probs=25.2
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
-.+|+|+|+|.+|+.|++.|+.+|++|
T Consensus 190 g~~VlV~G~G~vG~~a~qla~~~Ga~V 216 (363)
T 3uog_A 190 GDRVVVQGTGGVALFGLQIAKATGAEV 216 (363)
T ss_dssp TCEEEEESSBHHHHHHHHHHHHTTCEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEE
Confidence 468999999999999999999999987
No 253
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=75.14 E-value=0.95 Score=47.18 Aligned_cols=26 Identities=8% Similarity=-0.106 Sum_probs=23.2
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
++|.|||+|+.|..-+..+.+.|..|
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V 27 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKV 27 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEE
Confidence 57999999999999888888889876
No 254
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=75.11 E-value=1.8 Score=43.18 Aligned_cols=26 Identities=12% Similarity=0.144 Sum_probs=23.9
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
..|+|||+|.+|+.|+..|.+.|..|
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V 27 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKV 27 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCE
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeE
Confidence 36999999999999999999999976
No 255
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=75.04 E-value=4.5 Score=39.54 Aligned_cols=24 Identities=17% Similarity=0.181 Sum_probs=19.3
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCC
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPH 228 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa 228 (452)
+||.|+|+|.+|......+...|.
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~ 24 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLD 24 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC
Confidence 589999999999987776665554
No 256
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=75.03 E-value=3.8 Score=38.29 Aligned_cols=29 Identities=14% Similarity=0.062 Sum_probs=24.5
Q ss_pred CCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 202 ICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 202 i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
+...+++|+|+ |-.|+..+..+.+.|+.|
T Consensus 11 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V 40 (267)
T 1iy8_A 11 FTDRVVLITGGGSGLGRATAVRLAAEGAKL 40 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 34568999998 779999999999999987
No 257
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=74.92 E-value=2.1 Score=45.12 Aligned_cols=28 Identities=11% Similarity=0.099 Sum_probs=25.0
Q ss_pred CCceEEEEcCcHHHHHHHHHHhcC--CCEE
Q 012946 203 CPLVFVFTGSGHASIAAQELFKLL--PHTF 230 (452)
Q Consensus 203 ~p~kv~V~G~G~vg~gAi~~a~~L--Ga~v 230 (452)
...+|+|||+|.+|+.|+..+.++ |..|
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V 64 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEI 64 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEE
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCE
Confidence 467899999999999999999998 7766
No 258
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=74.87 E-value=2.3 Score=42.14 Aligned_cols=28 Identities=11% Similarity=0.140 Sum_probs=25.8
Q ss_pred CCceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 203 CPLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 203 ~p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
.+.+|+|+|+|.+|+.++..|.+.|..|
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v 52 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDV 52 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCE
Confidence 4678999999999999999999999977
No 259
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=74.81 E-value=5.1 Score=37.08 Aligned_cols=29 Identities=14% Similarity=0.015 Sum_probs=24.5
Q ss_pred CCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 202 ICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 202 i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
+...+|+|+|+ |-.|+..++.+.+.|+.|
T Consensus 7 l~~k~vlITGas~gIG~~~a~~l~~~G~~V 36 (261)
T 3n74_A 7 LEGKVALITGAGSGFGEGMAKRFAKGGAKV 36 (261)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEE
Confidence 34578999998 668999999999999987
No 260
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=74.81 E-value=3.5 Score=40.61 Aligned_cols=28 Identities=14% Similarity=0.052 Sum_probs=25.6
Q ss_pred CCceEEEEcCcHHHHHH-HHHH-hcCCCE-E
Q 012946 203 CPLVFVFTGSGHASIAA-QELF-KLLPHT-F 230 (452)
Q Consensus 203 ~p~kv~V~G~G~vg~gA-i~~a-~~LGa~-v 230 (452)
.+.+|+|+|+|.+|+.| ++.| +.+|+. |
T Consensus 172 ~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~V 202 (357)
T 2b5w_A 172 DPSSAFVLGNGSLGLLTLAMLKVDDKGYENL 202 (357)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHCTTCCCEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHHcCCcEE
Confidence 45889999999999999 9999 999996 6
No 261
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=74.65 E-value=1.2 Score=42.32 Aligned_cols=29 Identities=14% Similarity=0.133 Sum_probs=23.4
Q ss_pred CCCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
.+. .+++|+|+ |-.|+...+.+.+.|+.|
T Consensus 19 ~~~-k~vlVTGas~gIG~aia~~La~~G~~V 48 (272)
T 2nwq_A 19 HMS-STLFITGATSGFGEACARRFAEAGWSL 48 (272)
T ss_dssp --C-CEEEESSTTTSSHHHHHHHHHHTTCEE
T ss_pred CcC-cEEEEeCCCCHHHHHHHHHHHHCCCEE
Confidence 344 67899998 669999999999999987
No 262
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=74.64 E-value=4.7 Score=39.73 Aligned_cols=104 Identities=12% Similarity=0.014 Sum_probs=66.3
Q ss_pred CCCCceEEEEcCc---HHHHHHHHHHhcCCCEE--eCCCCh---hhHHhhhCCCCCccccCCCCceeEEEeeeeeccccc
Q 012946 201 GICPLVFVFTGSG---HASIAAQELFKLLPHTF--VDPSRL---PELFEKAGDSSQSTCSSSTKRVFQVYGCVVTSENMV 272 (452)
Q Consensus 201 ~i~p~kv~V~G~G---~vg~gAi~~a~~LGa~v--v~~~~l---~~~~e~~~~~~~~~~~~~~~~~~~v~~~~~~~~d~~ 272 (452)
++.-.+|+++|-| +|+..-+..+..+|+++ +.|+.+ +++.+.. ...|.+ +
T Consensus 152 ~l~gl~va~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~--------~~~g~~---~----------- 209 (308)
T 1ml4_A 152 RIDGLKIGLLGDLKYGRTVHSLAEALTFYDVELYLISPELLRMPRHIVEEL--------REKGMK---V----------- 209 (308)
T ss_dssp CSSSEEEEEESCTTTCHHHHHHHHHGGGSCEEEEEECCGGGCCCHHHHHHH--------HHTTCC---E-----------
T ss_pred CCCCeEEEEeCCCCcCchHHHHHHHHHHCCCEEEEECCccccCCHHHHHHH--------HHcCCe---E-----------
Confidence 5677999999995 89999999999999987 778766 1222110 000111 0
Q ss_pred ccCCCCCCCcccccccCcCCcCcchHhhhcCCCcEEEeccccCCC-----------CCcccCHHHHHHhhcCCCCeEEEE
Q 012946 273 EPKDSSRAFDKNDYYEHPEQYNPIFHEKIAPYASAIINCIYWEKQ-----------FPRLLSTQQLRDLAQKGCPLVGIS 341 (452)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~e~y~~~f~~~~~~~~DIvIn~a~~~~~-----------~P~Lit~e~l~~mk~gs~~l~vIv 341 (452)
....+| .+.++.+|||.+..-...+ .|.-||.+.++.+++.. |+
T Consensus 210 ------------~~~~d~--------~eav~~aDvvyt~~~q~er~~~~~~~~~~~~~y~v~~~ll~~a~~~a-----i~ 264 (308)
T 1ml4_A 210 ------------VETTTL--------EDVIGKLDVLYVTRIQKERFPDEQEYLKVKGSYQVNLKVLEKAKDEL-----RI 264 (308)
T ss_dssp ------------EEESCT--------HHHHTTCSEEEECCCCGGGSSSHHHHHTTTTCCCBCTTGGGGSCTTC-----EE
T ss_pred ------------EEEcCH--------HHHhcCCCEEEECCccccccCCHHHHHHHhcCcccCHHHHhhcCCCC-----EE
Confidence 011122 5678899999998643222 26778888887777655 44
Q ss_pred EeeecCCCCeee
Q 012946 342 DLTCDMEGSIEI 353 (452)
Q Consensus 342 Dvs~D~gG~iE~ 353 (452)
+=|-+- +.|+
T Consensus 265 -mH~lPr-g~EI 274 (308)
T 1ml4_A 265 -MHPLPR-VDEI 274 (308)
T ss_dssp -ECCSCC-SSSB
T ss_pred -ECCCCC-CCee
Confidence 556553 3455
No 263
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=74.52 E-value=1.9 Score=42.99 Aligned_cols=28 Identities=21% Similarity=0.292 Sum_probs=25.0
Q ss_pred CCceEEEEcCcHHHHHHHHHHhcCC-CEE
Q 012946 203 CPLVFVFTGSGHASIAAQELFKLLP-HTF 230 (452)
Q Consensus 203 ~p~kv~V~G~G~vg~gAi~~a~~LG-a~v 230 (452)
.+.+|+|||+|.+|+.|+..+.+.| ..|
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v 33 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDY 33 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCE
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcE
Confidence 4578999999999999999999999 755
No 264
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=74.50 E-value=2.4 Score=41.07 Aligned_cols=31 Identities=16% Similarity=0.170 Sum_probs=26.4
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCC-EE--eCCC
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPH-TF--VDPS 234 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa-~v--v~~~ 234 (452)
..+|+|||+|.+|+.|+..+.+.|. .| ++..
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~ 37 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKG 37 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecC
Confidence 3679999999999999999999998 66 5544
No 265
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=74.42 E-value=2.4 Score=42.11 Aligned_cols=28 Identities=7% Similarity=0.039 Sum_probs=25.6
Q ss_pred CCceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 203 CPLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 203 ~p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
.+.+|+|+|+|.+|+.++..|.+.|..|
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v 31 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDV 31 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCE
Confidence 3578999999999999999999999977
No 266
>2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus}
Probab=74.31 E-value=3 Score=41.39 Aligned_cols=34 Identities=6% Similarity=-0.096 Sum_probs=27.3
Q ss_pred CCcEEEeccccCCCCCcccCHHHHHHh-hcCCCCeEEEEEeeecC
Q 012946 304 YASAIINCIYWEKQFPRLLSTQQLRDL-AQKGCPLVGISDLTCDM 347 (452)
Q Consensus 304 ~~DIvIn~a~~~~~~P~Lit~e~l~~m-k~gs~~l~vIvDvs~D~ 347 (452)
.+|+||.| .|...+++..... +.|. +|||+|+|.
T Consensus 61 ~~DvV~~a------~g~~~s~~~a~~~~~~G~----~vId~s~~~ 95 (331)
T 2yv3_A 61 PVDLVLAS------AGGGISRAKALVWAEGGA----LVVDNSSAW 95 (331)
T ss_dssp CCSEEEEC------SHHHHHHHHHHHHHHTTC----EEEECSSSS
T ss_pred CCCEEEEC------CCccchHHHHHHHHHCCC----EEEECCCcc
Confidence 68999988 4667777777766 7787 999999884
No 267
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=74.19 E-value=4.8 Score=37.78 Aligned_cols=28 Identities=21% Similarity=0.220 Sum_probs=24.2
Q ss_pred CCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 203 CPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 203 ~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
...+++|+|+ |-.|+..++.+.+.|+.|
T Consensus 5 ~~k~vlITGas~gIG~aia~~l~~~G~~V 33 (263)
T 2a4k_A 5 SGKTILVTGAASGIGRAALDLFAREGASL 33 (263)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 4568999998 779999999999999987
No 268
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=74.18 E-value=3.3 Score=38.64 Aligned_cols=29 Identities=14% Similarity=0.086 Sum_probs=24.6
Q ss_pred CCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 202 ICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 202 i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
+...+++|+|+ |-.|+..++.+.+.|+.|
T Consensus 4 l~~k~vlVTGas~gIG~aia~~l~~~G~~V 33 (257)
T 3imf_A 4 MKEKVVIITGGSSGMGKGMATRFAKEGARV 33 (257)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 44578999998 679999999999999987
No 269
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=74.14 E-value=2 Score=40.35 Aligned_cols=27 Identities=15% Similarity=0.047 Sum_probs=24.6
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
..+|+|||+|.+|+.|+..+.+.|..|
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v 41 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKT 41 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcE
Confidence 368999999999999999999999876
No 270
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=74.08 E-value=2.4 Score=41.64 Aligned_cols=27 Identities=11% Similarity=0.064 Sum_probs=24.9
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
-.+|+|+|+|.+|+.|++.|+.+|+.|
T Consensus 169 g~~VlV~GaG~vG~~a~qla~~~Ga~V 195 (352)
T 1e3j_A 169 GTTVLVIGAGPIGLVSVLAAKAYGAFV 195 (352)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEE
Confidence 367999999999999999999999976
No 271
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=73.87 E-value=4 Score=42.45 Aligned_cols=28 Identities=14% Similarity=0.275 Sum_probs=25.4
Q ss_pred CCceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 203 CPLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 203 ~p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
..++|.|+|+|.+|+.-...+.+.|..|
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G~~V 34 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIGHDV 34 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred CCceEEEECcCHHHHHHHHHHHhCCCEE
Confidence 3689999999999999888898999987
No 272
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=73.85 E-value=2 Score=41.92 Aligned_cols=27 Identities=15% Similarity=0.105 Sum_probs=25.1
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
..+|+|+|+|-+|+.|++.|+.+|++|
T Consensus 167 g~~VlV~GaG~vG~~a~qla~~~Ga~V 193 (340)
T 3s2e_A 167 GQWVVISGIGGLGHVAVQYARAMGLRV 193 (340)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeE
Confidence 467999999999999999999999987
No 273
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=73.81 E-value=2.4 Score=42.13 Aligned_cols=27 Identities=19% Similarity=0.214 Sum_probs=24.7
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCC-EE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPH-TF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa-~v 230 (452)
-.+|+|+|+|.+|+.|++.|+.+|+ +|
T Consensus 183 g~~VlV~GaG~vG~~aiqlak~~Ga~~V 210 (370)
T 4ej6_A 183 GSTVAILGGGVIGLLTVQLARLAGATTV 210 (370)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEE
Confidence 3679999999999999999999999 66
No 274
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=73.77 E-value=3.2 Score=39.21 Aligned_cols=30 Identities=7% Similarity=0.012 Sum_probs=25.1
Q ss_pred CCCCceEEEEcC-cH--HHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGS-GH--ASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~-G~--vg~gAi~~a~~LGa~v 230 (452)
.+...+|+|+|+ |. .|+..++.+.+.|+.|
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V 55 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAEL 55 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEE
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEE
Confidence 456788999997 55 8999899999999987
No 275
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=73.72 E-value=4.7 Score=40.21 Aligned_cols=36 Identities=17% Similarity=0.254 Sum_probs=31.1
Q ss_pred CCCCceEEEEcCc--HHHHHHHHHHhcCCCEE--eCCCCh
Q 012946 201 GICPLVFVFTGSG--HASIAAQELFKLLPHTF--VDPSRL 236 (452)
Q Consensus 201 ~i~p~kv~V~G~G--~vg~gAi~~a~~LGa~v--v~~~~l 236 (452)
.+.-.+|+++|-| +++..-+..+..+|+++ +.|+.+
T Consensus 152 ~l~gl~ia~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~ 191 (333)
T 1duv_G 152 AFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQAC 191 (333)
T ss_dssp CGGGCEEEEESCTTSHHHHHHHHHHHHHCCEEEEECCGGG
T ss_pred CCCCcEEEEECCCccchHHHHHHHHHHcCCEEEEECCccc
Confidence 4567899999996 99999999999999987 778765
No 276
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=73.72 E-value=2.7 Score=41.80 Aligned_cols=28 Identities=11% Similarity=0.056 Sum_probs=22.1
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCC
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPH 228 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa 228 (452)
..++.||.|+|+|.+|.+.+..+...|.
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~~~ 43 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMKDL 43 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHTTC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCC
Confidence 4578999999999999987776665565
No 277
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=73.70 E-value=7.3 Score=37.34 Aligned_cols=32 Identities=16% Similarity=0.107 Sum_probs=27.7
Q ss_pred CCCCCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 199 PSGICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 199 ~~~i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
|..+...+|+|+|+ |-.|...++.+.+.|+.|
T Consensus 15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V 47 (330)
T 2pzm_A 15 VPRGSHMRILITGGAGCLGSNLIEHWLPQGHEI 47 (330)
T ss_dssp CSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEE
T ss_pred cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 34566789999998 999999999999999987
No 278
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=73.68 E-value=8.9 Score=37.18 Aligned_cols=30 Identities=13% Similarity=0.110 Sum_probs=25.9
Q ss_pred CCCCceEEEEcC-cHHHHHHHHHHhc--CCCEE
Q 012946 201 GICPLVFVFTGS-GHASIAAQELFKL--LPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~-G~vg~gAi~~a~~--LGa~v 230 (452)
.+...+|+|+|+ |-+|..-++.+.+ .|+.|
T Consensus 7 ~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V 39 (362)
T 3sxp_A 7 ELENQTILITGGAGFVGSNLAFHFQENHPKAKV 39 (362)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEE
T ss_pred hcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeE
Confidence 345689999987 9999999999988 89987
No 279
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=73.66 E-value=2.4 Score=42.61 Aligned_cols=27 Identities=22% Similarity=0.203 Sum_probs=24.9
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCC-EE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPH-TF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa-~v 230 (452)
--+|+|+|+|.+|+.|++.|+.+|+ .|
T Consensus 214 g~~VlV~GaG~vG~~aiqlak~~Ga~~V 241 (404)
T 3ip1_A 214 GDNVVILGGGPIGLAAVAILKHAGASKV 241 (404)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEE
Confidence 4679999999999999999999999 66
No 280
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=73.59 E-value=3.7 Score=40.42 Aligned_cols=25 Identities=20% Similarity=0.258 Sum_probs=21.1
Q ss_pred CCceEEEEc-CcHHHHHHHHHHhcCC
Q 012946 203 CPLVFVFTG-SGHASIAAQELFKLLP 227 (452)
Q Consensus 203 ~p~kv~V~G-~G~vg~gAi~~a~~LG 227 (452)
.+.||+|+| +|.+|...+..+...|
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g 32 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNP 32 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCT
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCC
Confidence 578999999 7999999888887767
No 281
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=73.59 E-value=2.4 Score=42.05 Aligned_cols=31 Identities=23% Similarity=0.399 Sum_probs=24.8
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCC--EE--eCCCC
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPH--TF--VDPSR 235 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa--~v--v~~~~ 235 (452)
.||+|||+|.+|+.|+..++++|. +| |++..
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~ 37 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNE 37 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCC
Confidence 589999999999999998887663 44 66543
No 282
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=73.52 E-value=2.4 Score=42.56 Aligned_cols=32 Identities=13% Similarity=0.114 Sum_probs=26.1
Q ss_pred CCceEEEEcCcHHHHHHHHHHhcCCCEE--eCCC
Q 012946 203 CPLVFVFTGSGHASIAAQELFKLLPHTF--VDPS 234 (452)
Q Consensus 203 ~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~~ 234 (452)
...||+|+|+|.+|+.|+..+...+..+ ++.+
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~ 41 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSE 41 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSS
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECC
Confidence 4678999999999999999997777755 5443
No 283
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=73.37 E-value=3.4 Score=39.55 Aligned_cols=29 Identities=14% Similarity=0.086 Sum_probs=24.7
Q ss_pred CCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 202 ICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 202 i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
+...+|+|+|+ |-.|+..++.+.+.|+.|
T Consensus 32 l~~k~vlVTGas~gIG~aia~~L~~~G~~V 61 (291)
T 3cxt_A 32 LKGKIALVTGASYGIGFAIASAYAKAGATI 61 (291)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEE
Confidence 34568999998 779999999999999987
No 284
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=73.33 E-value=2.5 Score=42.24 Aligned_cols=27 Identities=22% Similarity=0.262 Sum_probs=24.6
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCC-EE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPH-TF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa-~v 230 (452)
-.+|+|+|+|-+|+.|++.|+.+|+ .|
T Consensus 186 g~~VlV~GaG~vG~~aiqlAk~~Ga~~V 213 (398)
T 1kol_A 186 GSTVYVAGAGPVGLAAAASARLLGAAVV 213 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEE
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCeE
Confidence 3689999999999999999999999 55
No 285
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=73.25 E-value=2.6 Score=41.54 Aligned_cols=27 Identities=11% Similarity=0.124 Sum_probs=24.8
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCC-EE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPH-TF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa-~v 230 (452)
-.+|+|+|+|.+|+.|++.|+.+|+ .|
T Consensus 172 g~~VlV~GaG~vG~~aiqlak~~Ga~~V 199 (356)
T 1pl8_A 172 GHKVLVCGAGPIGMVTLLVAKAMGAAQV 199 (356)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEE
Confidence 3679999999999999999999999 66
No 286
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=73.22 E-value=5.2 Score=39.91 Aligned_cols=28 Identities=11% Similarity=0.039 Sum_probs=24.7
Q ss_pred CCceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 203 CPLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 203 ~p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
.+.+|.|+|+|..|..-...+.+.|..|
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~G~~V 55 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARKGQKV 55 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTTTCCE
T ss_pred cCCeEEEECccHHHHHHHHHHHHCCCeE
Confidence 3578999999999999888888899876
No 287
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=73.20 E-value=5.4 Score=36.94 Aligned_cols=27 Identities=11% Similarity=0.112 Sum_probs=23.7
Q ss_pred CceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
..+++|+|+ |-.|+..++.+.+.|+.|
T Consensus 4 ~k~vlVTGas~giG~~ia~~l~~~G~~V 31 (255)
T 2q2v_A 4 GKTALVTGSTSGIGLGIAQVLARAGANI 31 (255)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEE
Confidence 467899998 789999999999999987
No 288
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=72.99 E-value=2 Score=44.44 Aligned_cols=27 Identities=15% Similarity=0.180 Sum_probs=24.4
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCC-CEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLP-HTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LG-a~v 230 (452)
..+|+|||+|.+|+.|+..|.+.| ..|
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V 35 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDC 35 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSE
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCE
Confidence 568999999999999999999999 655
No 289
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=72.93 E-value=2.1 Score=40.72 Aligned_cols=26 Identities=15% Similarity=0.220 Sum_probs=23.0
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
--|+|||+|.+|+.|+-.|.++|..|
T Consensus 7 yDVvIIGaGpAGlsAA~~lar~g~~v 32 (304)
T 4fk1_A 7 IDCAVIGAGPAGLNASLVLGRARKQI 32 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred cCEEEECCCHHHHHHHHHHHHCCCCE
Confidence 45899999999999988888899866
No 290
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=72.89 E-value=2.6 Score=42.11 Aligned_cols=24 Identities=17% Similarity=0.257 Sum_probs=22.6
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCC
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPH 228 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa 228 (452)
.+|+|||+|.+|+.|+..+.+.|.
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~ 25 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKY 25 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC
T ss_pred CCEEEEcChHHHHHHHHHHHhhCc
Confidence 469999999999999999999998
No 291
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=72.89 E-value=8 Score=36.90 Aligned_cols=30 Identities=10% Similarity=-0.059 Sum_probs=25.6
Q ss_pred CCCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
.+...+++|+|+ |-.|+.....+.+.|+.|
T Consensus 25 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V 55 (299)
T 3t7c_A 25 KVEGKVAFITGAARGQGRSHAITLAREGADI 55 (299)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEE
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 456788999998 668999999999999987
No 292
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=72.88 E-value=2 Score=41.64 Aligned_cols=34 Identities=12% Similarity=0.174 Sum_probs=29.0
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcCCCEE--eCCC
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLLPHTF--VDPS 234 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~~ 234 (452)
.+...+|+|+|+|.+|...+..+...||.| ++|+
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~ 45 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCC
Confidence 345688999999999999999999999976 5553
No 293
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=72.82 E-value=4.3 Score=38.66 Aligned_cols=30 Identities=13% Similarity=-0.030 Sum_probs=24.4
Q ss_pred CCCCceEEEEcCcH-HHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGSGH-ASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~G~-vg~gAi~~a~~LGa~v 230 (452)
++.-.+++|+|++. .|+.....+-+.|+.|
T Consensus 4 ~L~gKvalVTGas~GIG~aia~~la~~Ga~V 34 (258)
T 4gkb_A 4 NLQDKVVIVTGGASGIGGAISMRLAEERAIP 34 (258)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEE
Confidence 34568899999954 8888888888999977
No 294
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=72.73 E-value=2.1 Score=42.12 Aligned_cols=26 Identities=12% Similarity=0.011 Sum_probs=24.0
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHT 229 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~ 229 (452)
..+|+|+|+|.+|+.|++.|+.+|+.
T Consensus 180 g~~VlV~GaG~vG~~aiqlak~~Ga~ 205 (363)
T 3m6i_A 180 GDPVLICGAGPIGLITMLCAKAAGAC 205 (363)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCC
Confidence 35799999999999999999999996
No 295
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=72.71 E-value=2.7 Score=41.35 Aligned_cols=28 Identities=18% Similarity=0.073 Sum_probs=25.2
Q ss_pred CCceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 203 CPLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 203 ~p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
.+.+|+|+|+|.+|+.++..+.+.|..|
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~~G~~v 37 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQNGWDV 37 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCE
Confidence 3578999999999999999999999977
No 296
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=72.69 E-value=6.3 Score=36.90 Aligned_cols=30 Identities=10% Similarity=-0.021 Sum_probs=25.4
Q ss_pred CCCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
.+...+|+|+|+ |-.|+..++.+.+.|+.|
T Consensus 7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V 37 (287)
T 3pxx_A 7 RVQDKVVLVTGGARGQGRSHAVKLAEEGADI 37 (287)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCeE
Confidence 345678999998 679999999999999987
No 297
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=72.61 E-value=3.1 Score=38.12 Aligned_cols=29 Identities=10% Similarity=0.035 Sum_probs=24.9
Q ss_pred CCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 202 ICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 202 i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
+...+|+|+|+ |-.|+..++.+.+.|+.|
T Consensus 9 ~~~~~vlVtGasggiG~~la~~l~~~G~~V 38 (255)
T 1fmc_A 9 LDGKCAIITGAGAGIGKEIAITFATAGASV 38 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTTTCEE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEE
Confidence 34578999998 889999999999999987
No 298
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=72.60 E-value=4.5 Score=39.93 Aligned_cols=27 Identities=11% Similarity=0.086 Sum_probs=22.2
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCC-EE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPH-TF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa-~v 230 (452)
..||.|+|+|.+|...+..+..-|. ++
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v 32 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDV 32 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceE
Confidence 4799999999999988887777665 55
No 299
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=72.56 E-value=3.2 Score=39.15 Aligned_cols=30 Identities=17% Similarity=0.111 Sum_probs=25.5
Q ss_pred CCCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
.+...+|+|+|+ |-.|+..+..+.+.|+.|
T Consensus 24 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V 54 (266)
T 3grp_A 24 KLTGRKALVTGATGGIGEAIARCFHAQGAIV 54 (266)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEE
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEE
Confidence 445678999998 679999999999999987
No 300
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=72.50 E-value=3.5 Score=38.82 Aligned_cols=30 Identities=13% Similarity=-0.044 Sum_probs=25.4
Q ss_pred CCCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
.+...+++|+|+ |-.|+.....+.+.|+.|
T Consensus 8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~~V 38 (277)
T 3tsc_A 8 KLEGRVAFITGAARGQGRAHAVRMAAEGADI 38 (277)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEE
T ss_pred ccCCCEEEEECCccHHHHHHHHHHHHcCCEE
Confidence 445678999998 669999999999999987
No 301
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=72.45 E-value=8.3 Score=38.35 Aligned_cols=39 Identities=10% Similarity=0.109 Sum_probs=31.6
Q ss_pred hhcCCCcEEEeccccCCCCCcccCHHHHHHh-hcCCCCeEEEEEeeecCC
Q 012946 300 KIAPYASAIINCIYWEKQFPRLLSTQQLRDL-AQKGCPLVGISDLTCDME 348 (452)
Q Consensus 300 ~~~~~~DIvIn~a~~~~~~P~Lit~e~l~~m-k~gs~~l~vIvDvs~D~g 348 (452)
+++..+||++.| .|.-++++.+... +.|. .|||+|+|.-
T Consensus 71 ~~~~~~Dvvf~a------~p~~~s~~~~~~~~~~g~----~vIDlSa~fR 110 (337)
T 3dr3_A 71 EFSPGVDVVFLA------TAHEVSHDLAPQFLEAGC----VVFDLSGAFR 110 (337)
T ss_dssp GTCTTCSEEEEC------SCHHHHHHHHHHHHHTTC----EEEECSSTTS
T ss_pred HHhcCCCEEEEC------CChHHHHHHHHHHHHCCC----EEEEcCCccc
Confidence 344789999988 5778888888776 7788 8999999964
No 302
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=72.35 E-value=2.9 Score=40.72 Aligned_cols=28 Identities=14% Similarity=-0.021 Sum_probs=25.3
Q ss_pred CCceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 203 CPLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 203 ~p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
....|+|||+|.+|+.++..|.+.|..|
T Consensus 16 ~~~dvvIIGgG~~Gl~~A~~La~~G~~V 43 (382)
T 1ryi_A 16 RHYEAVVIGGGIIGSAIAYYLAKENKNT 43 (382)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCcE
Confidence 3578999999999999999999999976
No 303
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=72.16 E-value=6.4 Score=36.53 Aligned_cols=28 Identities=29% Similarity=0.183 Sum_probs=24.2
Q ss_pred CCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 203 CPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 203 ~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
...+++|+|+ |-.|+..++.+.+.|+.|
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V 34 (263)
T 3ai3_A 6 SGKVAVITGSSSGIGLAIAEGFAKEGAHI 34 (263)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEE
Confidence 4567999998 789999999999999987
No 304
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=72.12 E-value=2.9 Score=42.30 Aligned_cols=28 Identities=7% Similarity=0.087 Sum_probs=25.4
Q ss_pred CCceEEEEcCcHHHHHHHHHHhcCCC--EE
Q 012946 203 CPLVFVFTGSGHASIAAQELFKLLPH--TF 230 (452)
Q Consensus 203 ~p~kv~V~G~G~vg~gAi~~a~~LGa--~v 230 (452)
...+|+|||+|.+|+.|+..|.+.|. .|
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V 34 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQV 34 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEE
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCe
Confidence 35789999999999999999999998 66
No 305
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=72.10 E-value=2.7 Score=36.60 Aligned_cols=26 Identities=12% Similarity=0.180 Sum_probs=23.8
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
.+|+|+|+|.+|..+...+.++|..|
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v 27 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKV 27 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcE
Confidence 36999999999999999999999966
No 306
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=72.09 E-value=4.4 Score=37.88 Aligned_cols=29 Identities=14% Similarity=0.078 Sum_probs=24.0
Q ss_pred CCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 202 ICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 202 i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
+...+|+|+|+ |-.|+..++.+.+.|+.|
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~~V 48 (253)
T 2nm0_A 19 HMSRSVLVTGGNRGIGLAIARAFADAGDKV 48 (253)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEE
Confidence 34568999998 779999999999999987
No 307
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=72.02 E-value=5.5 Score=37.60 Aligned_cols=30 Identities=10% Similarity=-0.063 Sum_probs=25.5
Q ss_pred CCCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
.+...+++|+|+ |-.|+...+.+.+.|+.|
T Consensus 8 ~l~~k~~lVTGas~gIG~aia~~la~~G~~V 38 (286)
T 3uve_A 8 RVEGKVAFVTGAARGQGRSHAVRLAQEGADI 38 (286)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEE
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCeE
Confidence 456688999998 669999999999999987
No 308
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=71.93 E-value=1.7 Score=45.27 Aligned_cols=30 Identities=10% Similarity=0.027 Sum_probs=23.7
Q ss_pred CCCCceEEEEcCcHHHHHHHHHHhcC-CCEE
Q 012946 201 GICPLVFVFTGSGHASIAAQELFKLL-PHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~G~vg~gAi~~a~~L-Ga~v 230 (452)
.+...+|+|+|+|.+|...+..+.+. |.+|
T Consensus 20 ~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V 50 (467)
T 2axq_A 20 RHMGKNVLLLGSGFVAQPVIDTLAANDDINV 50 (467)
T ss_dssp ---CEEEEEECCSTTHHHHHHHHHTSTTEEE
T ss_pred CCCCCEEEEECChHHHHHHHHHHHhCCCCeE
Confidence 44567899999999999999999888 5655
No 309
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=71.91 E-value=5.7 Score=37.25 Aligned_cols=27 Identities=22% Similarity=0.135 Sum_probs=23.7
Q ss_pred CceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
..+|+|+|+ |-.|...++.+.+.|+.|
T Consensus 5 ~k~vlVTGas~gIG~~~a~~l~~~G~~V 32 (281)
T 3m1a_A 5 AKVWLVTGASSGFGRAIAEAAVAAGDTV 32 (281)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTTCEE
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEE
Confidence 467899998 789999999999999987
No 310
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=71.91 E-value=3.4 Score=33.98 Aligned_cols=26 Identities=12% Similarity=0.259 Sum_probs=24.0
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
.+|+|+|+|.+|...+..+.+.|+.|
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v 30 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDI 30 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeE
Confidence 68999999999999999999999976
No 311
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=71.76 E-value=9 Score=36.13 Aligned_cols=30 Identities=13% Similarity=0.042 Sum_probs=25.7
Q ss_pred CCCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
.+...+++|+|+ |-.|+..++.+.+.|+.|
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V 58 (273)
T 3uf0_A 28 SLAGRTAVVTGAGSGIGRAIAHGYARAGAHV 58 (273)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEE
Confidence 456688999998 679999999999999987
No 312
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=71.72 E-value=2.7 Score=42.49 Aligned_cols=31 Identities=19% Similarity=0.183 Sum_probs=25.4
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCC--CEE--eCCCC
Q 012946 205 LVFVFTGSGHASIAAQELFKLLP--HTF--VDPSR 235 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LG--a~v--v~~~~ 235 (452)
.+|+|+|+|.+|+.|+..+++++ ++| |+++.
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~ 37 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRP 37 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCC
Confidence 47999999999999999998877 444 66654
No 313
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=71.72 E-value=8.5 Score=38.11 Aligned_cols=24 Identities=25% Similarity=0.303 Sum_probs=20.1
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCC
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLP 227 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LG 227 (452)
..+|.|+|+|..|..-...+.+.|
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~G 44 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTNA 44 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHcC
Confidence 358999999999998777777767
No 314
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=71.66 E-value=8.4 Score=36.25 Aligned_cols=26 Identities=19% Similarity=0.180 Sum_probs=23.7
Q ss_pred ceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
++|+|+|+ |-+|..-++.+.+.|++|
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V 27 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEV 27 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEE
Confidence 47999999 999999999999999987
No 315
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=71.59 E-value=7 Score=36.67 Aligned_cols=30 Identities=10% Similarity=0.006 Sum_probs=25.6
Q ss_pred CCCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
.+...+++|+|+ |-.|+..++.+.+.|+.|
T Consensus 18 ~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V 48 (267)
T 1vl8_A 18 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSV 48 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 455678999998 779999999999999987
No 316
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=71.56 E-value=2.2 Score=44.02 Aligned_cols=27 Identities=22% Similarity=0.217 Sum_probs=24.4
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
..+|+|||+|.+|+.|+..+.+.|..|
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V 30 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNV 30 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCE
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCE
Confidence 357999999999999999999999866
No 317
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=71.52 E-value=2.1 Score=39.81 Aligned_cols=28 Identities=18% Similarity=0.067 Sum_probs=23.0
Q ss_pred CCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 203 CPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 203 ~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
...+++|+|+ |-.|+...+.+.+.|+.|
T Consensus 8 ~~k~vlVTGas~gIG~aia~~l~~~G~~V 36 (257)
T 3tl3_A 8 RDAVAVVTGGASGLGLATTKRLLDAGAQV 36 (257)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHHTCEE
T ss_pred cCCEEEEeCCCCHHHHHHHHHHHHCCCEE
Confidence 4578999998 679999999999999987
No 318
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=71.51 E-value=2.4 Score=41.86 Aligned_cols=27 Identities=26% Similarity=0.373 Sum_probs=25.0
Q ss_pred CceEEEEcCcHHHHHHHHHHhcC-CCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLL-PHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~L-Ga~v 230 (452)
-.+|+|+|+|.+|+.|++.|+.+ |++|
T Consensus 187 g~~VlV~GaG~vG~~avqlak~~~Ga~V 214 (359)
T 1h2b_A 187 GAYVAIVGVGGLGHIAVQLLKVMTPATV 214 (359)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHCCCEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeE
Confidence 36899999999999999999999 9987
No 319
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=71.45 E-value=2.3 Score=43.44 Aligned_cols=27 Identities=22% Similarity=0.050 Sum_probs=23.9
Q ss_pred CceEEEEcCcHHHHHHHHHHhcC--CCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLL--PHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~L--Ga~v 230 (452)
+.+|+|||+|.+|+.|+..|.+. |..|
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~V 31 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHV 31 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCE
Confidence 46899999999999999999988 8866
No 320
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=71.38 E-value=4.2 Score=37.69 Aligned_cols=29 Identities=21% Similarity=0.092 Sum_probs=24.6
Q ss_pred CCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 202 ICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 202 i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
+...+++|+|+ |-.|+...+.+.+.|+.|
T Consensus 7 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V 36 (248)
T 3op4_A 7 LEGKVALVTGASRGIGKAIAELLAERGAKV 36 (248)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEE
Confidence 34578999998 669999999999999987
No 321
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=71.08 E-value=3.1 Score=41.22 Aligned_cols=27 Identities=11% Similarity=-0.025 Sum_probs=24.7
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCC-EE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPH-TF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa-~v 230 (452)
-.+|+|+|+|.+|+.|++.|+.+|+ .|
T Consensus 192 g~~VlV~GaG~vG~~a~qla~~~Ga~~V 219 (374)
T 2jhf_A 192 GSTCAVFGLGGVGLSVIMGCKAAGAARI 219 (374)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeE
Confidence 3689999999999999999999999 66
No 322
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=70.98 E-value=31 Score=33.95 Aligned_cols=36 Identities=14% Similarity=0.107 Sum_probs=31.5
Q ss_pred CCCCceEEEEcC-cHHHHHHHHHHhcCCCEE--eCCCCh
Q 012946 201 GICPLVFVFTGS-GHASIAAQELFKLLPHTF--VDPSRL 236 (452)
Q Consensus 201 ~i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v--v~~~~l 236 (452)
.+.-.+|+++|- ++++..-+..+..+|+++ +.|+.+
T Consensus 152 ~l~gl~va~vGD~~rva~Sl~~~~~~~g~~v~~~~P~~~ 190 (315)
T 1pvv_A 152 TIKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPEGY 190 (315)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCTTC
T ss_pred CcCCcEEEEECCCcchHHHHHHHHHHCCCEEEEECCccc
Confidence 567789999999 889999999999999987 778765
No 323
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=70.97 E-value=5.4 Score=39.53 Aligned_cols=26 Identities=12% Similarity=0.035 Sum_probs=22.4
Q ss_pred CCceEEEEcCcHHHHHHHHHHhcCCC
Q 012946 203 CPLVFVFTGSGHASIAAQELFKLLPH 228 (452)
Q Consensus 203 ~p~kv~V~G~G~vg~gAi~~a~~LGa 228 (452)
.+.||+|+|+|.+|...+..+...|.
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~ 33 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGI 33 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC
Confidence 57899999999999998888777665
No 324
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=70.84 E-value=2.6 Score=40.22 Aligned_cols=26 Identities=19% Similarity=0.355 Sum_probs=23.8
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
..|+|+|+|.+|+.++..|.+.|..|
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V 28 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQV 28 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcE
Confidence 46999999999999999999999976
No 325
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=70.73 E-value=3.7 Score=44.45 Aligned_cols=31 Identities=10% Similarity=0.185 Sum_probs=27.1
Q ss_pred CCceEEEEcCcHHHHHHHHHHhcCCCEE--eCC
Q 012946 203 CPLVFVFTGSGHASIAAQELFKLLPHTF--VDP 233 (452)
Q Consensus 203 ~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~ 233 (452)
.+.+|+|||+|.+|+.|+..|.+.|..| ++.
T Consensus 390 ~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~ 422 (690)
T 3k30_A 390 SDARVLVVGAGPSGLEAARALGVRGYDVVLAEA 422 (690)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEECS
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCeEEEEec
Confidence 3578999999999999999999999987 544
No 326
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=70.67 E-value=8 Score=36.40 Aligned_cols=30 Identities=17% Similarity=0.064 Sum_probs=25.1
Q ss_pred CCCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
.+...+++|+|+ |-.|+..++.+.+.|+.|
T Consensus 24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V 54 (277)
T 4fc7_A 24 LLRDKVAFITGGGSGIGFRIAEIFMRHGCHT 54 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTCEE
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEE
Confidence 345578999998 569999999999999987
No 327
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=70.63 E-value=2.7 Score=40.30 Aligned_cols=27 Identities=15% Similarity=0.219 Sum_probs=24.6
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
...|+|||+|.+|+.|+..|.+.|..|
T Consensus 4 ~~dvvIIG~G~~Gl~~A~~La~~G~~V 30 (369)
T 3dme_A 4 DIDCIVIGAGVVGLAIARALAAGGHEV 30 (369)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeE
Confidence 367999999999999999999999977
No 328
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=70.60 E-value=2.7 Score=41.58 Aligned_cols=27 Identities=19% Similarity=0.209 Sum_probs=24.7
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
...|+|+|+|.+|+.|+..|.+.|..|
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~G~~V 31 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKSGFKV 31 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCE
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCE
Confidence 368999999999999999999999976
No 329
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=70.53 E-value=4.5 Score=44.15 Aligned_cols=31 Identities=16% Similarity=0.132 Sum_probs=27.1
Q ss_pred CCceEEEEcCcHHHHHHHHHHhcCCCEE--eCC
Q 012946 203 CPLVFVFTGSGHASIAAQELFKLLPHTF--VDP 233 (452)
Q Consensus 203 ~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~ 233 (452)
.+.+|+|||+|.+|+.|+..|.+.|..| ++.
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~ 420 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLMESGYTVHLTDT 420 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEeC
Confidence 3578999999999999999999999987 544
No 330
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=70.53 E-value=3.2 Score=40.39 Aligned_cols=26 Identities=15% Similarity=0.135 Sum_probs=23.9
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
..|+|||+|.+|+.++..|.+.|..|
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~G~~V 29 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQGVKT 29 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeE
Confidence 57999999999999999999999976
No 331
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=70.40 E-value=3 Score=35.00 Aligned_cols=26 Identities=12% Similarity=0.171 Sum_probs=24.1
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
.+|+|+|+|..|...++.+.+.|+.|
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V 32 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKV 32 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeE
Confidence 47999999999999999999999976
No 332
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=70.39 E-value=8 Score=37.05 Aligned_cols=30 Identities=10% Similarity=0.101 Sum_probs=25.4
Q ss_pred CCCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
.+...+|+|+|+ |-.|+..++.+.+.|+.|
T Consensus 38 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V 68 (293)
T 3rih_A 38 DLSARSVLVTGGTKGIGRGIATVFARAGANV 68 (293)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEE
Confidence 445678999998 679999999999999987
No 333
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=70.20 E-value=2.8 Score=41.38 Aligned_cols=27 Identities=15% Similarity=0.173 Sum_probs=25.3
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
..+|+|+|+|.+|+.|++.|+.+|+.|
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~V 207 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEV 207 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEE
Confidence 578999999999999999999999977
No 334
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=70.20 E-value=2.6 Score=39.92 Aligned_cols=27 Identities=19% Similarity=0.042 Sum_probs=24.4
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
..+|+|+|+|.+|+.|+..|.+.|..|
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v 31 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARANLQP 31 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcE
Confidence 467999999999999999999999865
No 335
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=70.19 E-value=2.7 Score=41.14 Aligned_cols=27 Identities=22% Similarity=0.332 Sum_probs=25.2
Q ss_pred CceEEEEcCcHHHHHHHHHHhcC--CCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLL--PHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~L--Ga~v 230 (452)
..+|+|+|+|.+|+.|++.|+.+ |+.|
T Consensus 171 g~~VlV~GaG~vG~~aiqlak~~~~Ga~V 199 (344)
T 2h6e_A 171 EPVVIVNGIGGLAVYTIQILKALMKNITI 199 (344)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHCTTCEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCCEE
Confidence 46899999999999999999999 9987
No 336
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=70.17 E-value=11 Score=36.29 Aligned_cols=28 Identities=21% Similarity=0.299 Sum_probs=25.1
Q ss_pred CCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 203 CPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 203 ~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
.+.+|+|+|+ |-+|..-++.+.+.|+.|
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V 52 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVV 52 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEE
Confidence 3578999997 999999999999999987
No 337
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=70.16 E-value=2.8 Score=39.98 Aligned_cols=27 Identities=15% Similarity=0.180 Sum_probs=24.4
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
..+|+|+|+|.+|+.|+..+.+.|..|
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v 31 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGLSF 31 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCE
Confidence 468999999999999999999989866
No 338
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=70.09 E-value=3.2 Score=38.97 Aligned_cols=29 Identities=10% Similarity=0.131 Sum_probs=23.5
Q ss_pred CCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 202 ICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 202 i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
+...+|+|+|+ |-.|+..++.+.+.|+.|
T Consensus 25 l~~k~vlVTGas~gIG~aia~~l~~~G~~V 54 (260)
T 3gem_A 25 LSSAPILITGASQRVGLHCALRLLEHGHRV 54 (260)
T ss_dssp --CCCEEESSTTSHHHHHHHHHHHHTTCCE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 34567999998 779999999999999977
No 339
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=70.07 E-value=2.8 Score=40.98 Aligned_cols=28 Identities=14% Similarity=0.191 Sum_probs=25.3
Q ss_pred CCceEEEEcCcHHHHHHHHHHhcCCC-EE
Q 012946 203 CPLVFVFTGSGHASIAAQELFKLLPH-TF 230 (452)
Q Consensus 203 ~p~kv~V~G~G~vg~gAi~~a~~LGa-~v 230 (452)
+..+|+|+|+|.+|+.|++.|+.+|+ +|
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~V 192 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPI 192 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEE
Confidence 34679999999999999999999999 66
No 340
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=70.04 E-value=2.9 Score=39.78 Aligned_cols=27 Identities=19% Similarity=0.181 Sum_probs=24.5
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
...|+|+|+|.+|+.|+..|.+.|..|
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g~~v 42 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSGFSV 42 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcE
Confidence 367999999999999999999999866
No 341
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=70.02 E-value=13 Score=37.50 Aligned_cols=36 Identities=22% Similarity=0.296 Sum_probs=31.3
Q ss_pred CCCCceEEEEcCc--HHHHHHHHHHhcCCCEE--eCCCCh
Q 012946 201 GICPLVFVFTGSG--HASIAAQELFKLLPHTF--VDPSRL 236 (452)
Q Consensus 201 ~i~p~kv~V~G~G--~vg~gAi~~a~~LGa~v--v~~~~l 236 (452)
.+.-.+|+++|-| +|+..-+..+..+|+++ +.|+.+
T Consensus 173 ~l~gl~va~vGD~~~rva~Sl~~~~~~lG~~v~~~~P~~l 212 (359)
T 2w37_A 173 KLQGLTLTFMGDGRNNVANSLLVTGAILGVNIHIVAPKAL 212 (359)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHHTCEEEEECCGGG
T ss_pred CcCCeEEEEECCCccchHHHHHHHHHHcCCEEEEECCccc
Confidence 5667899999996 99999999999999987 778765
No 342
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=70.00 E-value=23 Score=33.40 Aligned_cols=29 Identities=7% Similarity=0.016 Sum_probs=24.6
Q ss_pred CCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 202 ICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 202 i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
+...+++|+|+ |-.|+..++.+.+.|+.|
T Consensus 7 l~~k~vlVTGas~GIG~aia~~l~~~G~~V 36 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGLAIAKRVAADGANV 36 (285)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHTTTCEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 34578999998 669999999999999987
No 343
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=70.00 E-value=3 Score=42.36 Aligned_cols=26 Identities=23% Similarity=0.218 Sum_probs=23.6
Q ss_pred ceEEEEcCcHHHHHHHHHHhcC--CCEE
Q 012946 205 LVFVFTGSGHASIAAQELFKLL--PHTF 230 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~L--Ga~v 230 (452)
.+|+|||+|.+|+.|+..+.+. |.+|
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V 30 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEI 30 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEE
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcE
Confidence 4799999999999999999998 8866
No 344
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=69.94 E-value=7 Score=37.99 Aligned_cols=29 Identities=7% Similarity=-0.023 Sum_probs=24.1
Q ss_pred CCCceEEEEcC-cHHHHHHHHHHhcC-CCEE
Q 012946 202 ICPLVFVFTGS-GHASIAAQELFKLL-PHTF 230 (452)
Q Consensus 202 i~p~kv~V~G~-G~vg~gAi~~a~~L-Ga~v 230 (452)
....+|+|+|+ |-+|..-++.+.+. |.+|
T Consensus 22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V 52 (372)
T 3slg_A 22 MKAKKVLILGVNGFIGHHLSKRILETTDWEV 52 (372)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHHSSCEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCCEE
Confidence 44578999996 99999999988887 8877
No 345
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=69.93 E-value=2.7 Score=41.55 Aligned_cols=27 Identities=19% Similarity=0.070 Sum_probs=24.7
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCC-EE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPH-TF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa-~v 230 (452)
-.+|+|+|+|.+|+.|++.|+.+|+ .|
T Consensus 191 g~~VlV~GaG~vG~~avqla~~~Ga~~V 218 (373)
T 2fzw_A 191 GSVCAVFGLGGVGLAVIMGCKVAGASRI 218 (373)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeE
Confidence 3689999999999999999999999 66
No 346
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=69.91 E-value=4.5 Score=42.18 Aligned_cols=28 Identities=21% Similarity=0.031 Sum_probs=25.4
Q ss_pred CCceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 203 CPLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 203 ~p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
.+..|+|+|+|.+|+.|+..+.+.|..|
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v 238 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRT 238 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeE
Confidence 4678999999999999999999999866
No 347
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=69.88 E-value=22 Score=35.00 Aligned_cols=36 Identities=14% Similarity=0.231 Sum_probs=31.2
Q ss_pred CCCCceEEEEcCc---HHHHHHHHHHhcC-CCEE--eCCCCh
Q 012946 201 GICPLVFVFTGSG---HASIAAQELFKLL-PHTF--VDPSRL 236 (452)
Q Consensus 201 ~i~p~kv~V~G~G---~vg~gAi~~a~~L-Ga~v--v~~~~l 236 (452)
++.-.+|+++|-| +++..-+..+..+ |+++ +.|+.+
T Consensus 151 ~l~gl~va~vGD~~~~rva~Sl~~~~~~~~g~~v~~~~P~~~ 192 (310)
T 3csu_A 151 RLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDAL 192 (310)
T ss_dssp CSSSCEEEEESCTTTCHHHHHHHHHHHTSSSCEEEEECCGGG
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHHHhCCCCEEEEECCccc
Confidence 5677999999994 9999999999999 9987 778766
No 348
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=69.81 E-value=3.3 Score=41.95 Aligned_cols=27 Identities=26% Similarity=0.262 Sum_probs=23.9
Q ss_pred CceEEEEcCcHHHHHHHHHHhcC--CCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLL--PHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~L--Ga~v 230 (452)
+.+|+|||+|.+|+.|+..+.++ |..|
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V 31 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDV 31 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEE
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCE
Confidence 46899999999999999999998 6665
No 349
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=69.65 E-value=1.3 Score=45.91 Aligned_cols=26 Identities=12% Similarity=-0.125 Sum_probs=23.1
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
.+|.|||+|+.|..-+..+.+.|..|
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V 31 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTV 31 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEE
Confidence 57999999999999888888889876
No 350
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=69.61 E-value=3 Score=39.80 Aligned_cols=27 Identities=19% Similarity=0.113 Sum_probs=24.5
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
..+|+|+|+|.+|+.|+..|.+.|..|
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~g~~v 34 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRAQLST 34 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred cCCEEEECCCHHHHHHHHHHHHcCCcE
Confidence 467999999999999999999999866
No 351
>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A
Probab=69.59 E-value=5.4 Score=39.89 Aligned_cols=36 Identities=11% Similarity=-0.045 Sum_probs=29.5
Q ss_pred cCCCcEEEeccccCCCCCcccCHHHHHHh-hcCCCCeEEEEEeeecC
Q 012946 302 APYASAIINCIYWEKQFPRLLSTQQLRDL-AQKGCPLVGISDLTCDM 347 (452)
Q Consensus 302 ~~~~DIvIn~a~~~~~~P~Lit~e~l~~m-k~gs~~l~vIvDvs~D~ 347 (452)
+..+||++-| .|...+++..... +.|. +|||+|.|.
T Consensus 61 ~~~~Dvvf~a------~~~~~s~~~a~~~~~~G~----~vID~Sa~~ 97 (344)
T 3tz6_A 61 PSGLDIALFS------AGSAMSKVQAPRFAAAGV----TVIDNSSAW 97 (344)
T ss_dssp CTTCSEEEEC------SCHHHHHHHHHHHHHTTC----EEEECSSTT
T ss_pred hccCCEEEEC------CChHHHHHHHHHHHhCCC----EEEECCCcc
Confidence 4678999988 4777888888776 7788 999999985
No 352
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=69.56 E-value=3 Score=42.51 Aligned_cols=26 Identities=12% Similarity=0.162 Sum_probs=24.1
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
.+|+|||+|.+|+.|...+.+.|..|
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v 65 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKT 65 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCE
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCE
Confidence 68999999999999999999999865
No 353
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=69.46 E-value=11 Score=35.05 Aligned_cols=29 Identities=17% Similarity=0.162 Sum_probs=24.8
Q ss_pred CCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 202 ICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 202 i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
+...+++|+|+ |-.|+..+..+.+.|+.|
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V 34 (262)
T 1zem_A 5 FNGKVCLVTGAGGNIGLATALRLAEEGTAI 34 (262)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEE
Confidence 34578999998 779999999999999987
No 354
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=69.43 E-value=2.8 Score=41.70 Aligned_cols=26 Identities=12% Similarity=0.084 Sum_probs=23.3
Q ss_pred ceEEEEcCcHHHHHHHHHHhc---CCCEE
Q 012946 205 LVFVFTGSGHASIAAQELFKL---LPHTF 230 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~---LGa~v 230 (452)
.+|+|||+|.+|+.|+..+.+ .|.+|
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V 30 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADV 30 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeE
Confidence 369999999999999999999 78866
No 355
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=69.28 E-value=3 Score=40.18 Aligned_cols=30 Identities=20% Similarity=0.189 Sum_probs=23.2
Q ss_pred CCCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
.....+|+|+|+ |-+|...++.|.+.|+.|
T Consensus 16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V 46 (347)
T 4id9_A 16 PRGSHMILVTGSAGRVGRAVVAALRTQGRTV 46 (347)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTTCCE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCEE
Confidence 446789999998 999999999999989876
No 356
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=69.27 E-value=7.7 Score=35.88 Aligned_cols=26 Identities=15% Similarity=-0.051 Sum_probs=22.8
Q ss_pred ceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
.+++|+|+ |-.|+..+..+.+.|+.|
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~~V 29 (256)
T 1geg_A 3 KVALVTGAGQGIGKAIALRLVKDGFAV 29 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEE
Confidence 46899987 779999999999999987
No 357
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=69.22 E-value=8 Score=36.41 Aligned_cols=29 Identities=10% Similarity=-0.035 Sum_probs=24.6
Q ss_pred CCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 202 ICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 202 i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
+...+++|+|+ |-.|+..+..+.+.|+.|
T Consensus 20 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V 49 (277)
T 2rhc_B 20 QDSEVALVTGATSGIGLEIARRLGKEGLRV 49 (277)
T ss_dssp TTSCEEEEETCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 34568999998 779999999999999987
No 358
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=69.19 E-value=4.9 Score=38.08 Aligned_cols=30 Identities=13% Similarity=0.081 Sum_probs=25.8
Q ss_pred CCCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
.+...+|+|+|+ |-.|+..++.+.+.|+.|
T Consensus 13 ~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V 43 (291)
T 3rd5_A 13 SFAQRTVVITGANSGLGAVTARELARRGATV 43 (291)
T ss_dssp CCTTCEEEEECCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEE
Confidence 456678999998 779999999999999987
No 359
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=69.18 E-value=3.4 Score=41.74 Aligned_cols=26 Identities=23% Similarity=0.276 Sum_probs=23.9
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCC--EE
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPH--TF 230 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa--~v 230 (452)
.+|+|||+|.+|+.|+..+.+.|. .|
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V 30 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKV 30 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEE
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcE
Confidence 479999999999999999999998 66
No 360
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=69.18 E-value=3 Score=40.79 Aligned_cols=27 Identities=15% Similarity=0.022 Sum_probs=25.0
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
-.+|+|+|+|.+|+.|++.|+.+|+.|
T Consensus 165 g~~VlV~GaG~vG~~~~~~a~~~Ga~V 191 (339)
T 1rjw_A 165 GEWVAIYGIGGLGHVAVQYAKAMGLNV 191 (339)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEE
Confidence 368999999999999999999999987
No 361
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=69.17 E-value=9.1 Score=35.79 Aligned_cols=30 Identities=13% Similarity=0.143 Sum_probs=25.9
Q ss_pred CCCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
.+...+|+|+|+ |-.|+..+..+.+.|+.|
T Consensus 28 ~l~~k~vlITGasggIG~~la~~L~~~G~~V 58 (272)
T 1yb1_A 28 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKL 58 (272)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEE
Confidence 456678999998 789999999999999987
No 362
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=69.10 E-value=3.1 Score=40.79 Aligned_cols=27 Identities=11% Similarity=0.016 Sum_probs=24.6
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCC-EE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPH-TF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa-~v 230 (452)
..+|+|+|+|.+|+.|++.|+.+|+ +|
T Consensus 167 g~~VlV~GaG~vG~~a~qla~~~Ga~~V 194 (352)
T 3fpc_A 167 GDTVCVIGIGPVGLMSVAGANHLGAGRI 194 (352)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTTTCSSE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCcEE
Confidence 4679999999999999999999999 56
No 363
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=69.09 E-value=5.8 Score=37.35 Aligned_cols=30 Identities=13% Similarity=0.119 Sum_probs=25.6
Q ss_pred CCCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
.....+|+|+|+ |-.|+..+..+.+.|+.|
T Consensus 11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V 41 (269)
T 3vtz_A 11 EFTDKVAIVTGGSSGIGLAVVDALVRYGAKV 41 (269)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEE
Confidence 456788999998 669999999999999987
No 364
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=69.02 E-value=4.6 Score=37.00 Aligned_cols=28 Identities=11% Similarity=0.029 Sum_probs=24.3
Q ss_pred CCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 203 CPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 203 ~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
...+|+|+|+ |-.|+..++.+.+.|+.|
T Consensus 10 ~~k~vlITGasggiG~~la~~l~~~G~~V 38 (254)
T 2wsb_A 10 DGACAAVTGAGSGIGLEICRAFAASGARL 38 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEE
Confidence 4568999998 889999999999999987
No 365
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=69.01 E-value=2.9 Score=41.91 Aligned_cols=27 Identities=19% Similarity=0.127 Sum_probs=24.9
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCC-EE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPH-TF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa-~v 230 (452)
--+|+|+|+|.+|+.|++.|+.+|+ .|
T Consensus 186 g~~VlV~GaG~vG~~aiqlak~~Ga~~V 213 (398)
T 2dph_A 186 GSHVYIAGAGPVGRCAAAGARLLGAACV 213 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEE
Confidence 3689999999999999999999999 66
No 366
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=68.97 E-value=3.2 Score=39.07 Aligned_cols=26 Identities=23% Similarity=0.060 Sum_probs=23.8
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
..|+|+|+|.+|+.|+..+.+.|..|
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~v 27 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKGIRT 27 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcE
Confidence 46999999999999999999999866
No 367
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=68.95 E-value=2.2 Score=40.50 Aligned_cols=27 Identities=11% Similarity=-0.057 Sum_probs=21.6
Q ss_pred CceEEEEcCcHHHHHHHHHHhcC--CCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLL--PHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~L--Ga~v 230 (452)
..+|.|||+|+.|..-+..+.+. |..|
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V 34 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKI 34 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEE
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEE
Confidence 36899999999999877777765 5555
No 368
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=68.94 E-value=4 Score=40.38 Aligned_cols=30 Identities=13% Similarity=0.176 Sum_probs=25.4
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE--eCCC
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF--VDPS 234 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~~ 234 (452)
-..|+|||+|.+|+.|+..+.++| +| ++.+
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~ 39 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKE 39 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSS
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECC
Confidence 367999999999999999999999 87 5443
No 369
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=68.92 E-value=3 Score=36.73 Aligned_cols=29 Identities=10% Similarity=0.032 Sum_probs=25.4
Q ss_pred CCCceEEEEcCcHHHHHHHHHHhcC-CCEE
Q 012946 202 ICPLVFVFTGSGHASIAAQELFKLL-PHTF 230 (452)
Q Consensus 202 i~p~kv~V~G~G~vg~gAi~~a~~L-Ga~v 230 (452)
....+|+|+|.|.+|+..++.+.+. |+.|
T Consensus 37 ~~~~~v~IiG~G~~G~~~a~~L~~~~g~~V 66 (183)
T 3c85_A 37 PGHAQVLILGMGRIGTGAYDELRARYGKIS 66 (183)
T ss_dssp CTTCSEEEECCSHHHHHHHHHHHHHHCSCE
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhccCCeE
Confidence 3456899999999999999999998 9866
No 370
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=68.86 E-value=2.9 Score=40.19 Aligned_cols=28 Identities=18% Similarity=0.129 Sum_probs=24.0
Q ss_pred CCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 203 CPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 203 ~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
...+++|+|+ |-.|+..++.+.+.|+.|
T Consensus 25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V 53 (297)
T 1xhl_A 25 SGKSVIITGSSNGIGRSAAVIFAKEGAQV 53 (297)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEE
Confidence 4567999998 779999999999999987
No 371
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=68.76 E-value=2.9 Score=42.33 Aligned_cols=28 Identities=11% Similarity=0.139 Sum_probs=24.1
Q ss_pred CCceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 203 CPLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 203 ~p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
...+|+|||+|.+|+.|...+.+.|..|
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v 42 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDA 42 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCE
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCE
Confidence 4578999999999999999999999866
No 372
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=68.64 E-value=4.3 Score=38.41 Aligned_cols=28 Identities=11% Similarity=-0.033 Sum_probs=23.5
Q ss_pred CCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 203 CPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 203 ~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
...+++|+|+ |-.|+..++.+.+.|+.|
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V 55 (272)
T 4dyv_A 27 GKKIAIVTGAGSGVGRAVAVALAGAGYGV 55 (272)
T ss_dssp -CCEEEETTTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEE
Confidence 4567899998 679999999999999987
No 373
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=68.56 E-value=2.9 Score=34.51 Aligned_cols=27 Identities=15% Similarity=0.153 Sum_probs=24.2
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
..+|+|+|+|.+|+..++.+.+.|+.|
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v 32 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEV 32 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEE
Confidence 357999999999999999999999866
No 374
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=68.56 E-value=3.1 Score=41.44 Aligned_cols=27 Identities=11% Similarity=0.250 Sum_probs=24.9
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCE-E
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHT-F 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~-v 230 (452)
...|+|+|+|.+|+.++..+.+.|.. |
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v 31 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKV 31 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeE
Confidence 46899999999999999999999998 7
No 375
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=68.48 E-value=8.8 Score=34.88 Aligned_cols=28 Identities=7% Similarity=-0.006 Sum_probs=24.7
Q ss_pred CCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 203 CPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 203 ~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
...+|+|+|+ |-.|+..++.+.+.|+.|
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~~V 34 (244)
T 3d3w_A 6 AGRRVLVTGAGKGIGRGTVQALHATGARV 34 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEE
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCCCEE
Confidence 4568999998 889999999999999987
No 376
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=68.46 E-value=5.6 Score=37.57 Aligned_cols=30 Identities=13% Similarity=0.061 Sum_probs=25.3
Q ss_pred CCCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
.+...+++|+|+ |-.|+...+.+.+.|+.|
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V 58 (271)
T 3v2g_A 28 SLAGKTAFVTGGSRGIGAAIAKRLALEGAAV 58 (271)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEE
Confidence 445678999998 668999999999999987
No 377
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=68.44 E-value=11 Score=37.12 Aligned_cols=26 Identities=8% Similarity=-0.102 Sum_probs=22.5
Q ss_pred CCceEEEEcCcHHHHHHHHHHhcCCC
Q 012946 203 CPLVFVFTGSGHASIAAQELFKLLPH 228 (452)
Q Consensus 203 ~p~kv~V~G~G~vg~gAi~~a~~LGa 228 (452)
.+.||.|+|+|.+|...+..+...|.
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~ 29 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGI 29 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC
Confidence 47899999999999998888877675
No 378
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=68.37 E-value=3 Score=41.13 Aligned_cols=27 Identities=15% Similarity=0.175 Sum_probs=24.9
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
+..|+|+|+|.+|+.++..|.+.|..|
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V 32 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRV 32 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcE
Confidence 478999999999999999999999976
No 379
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=68.29 E-value=7.8 Score=36.43 Aligned_cols=28 Identities=21% Similarity=0.197 Sum_probs=24.0
Q ss_pred CCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 203 CPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 203 ~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
...+++|+|+ |-.|+..+..+.+.|+.|
T Consensus 15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V 43 (266)
T 3p19_A 15 MKKLVVITGASSGIGEAIARRFSEEGHPL 43 (266)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCCE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 4568999998 779999999999999977
No 380
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=68.25 E-value=3.2 Score=38.14 Aligned_cols=26 Identities=8% Similarity=0.083 Sum_probs=24.0
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
..|+|+|+|.+|+.|+..+.++|..|
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g~~v 29 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKGVRV 29 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCE
Confidence 46999999999999999999999976
No 381
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=68.24 E-value=3.8 Score=39.96 Aligned_cols=31 Identities=10% Similarity=0.138 Sum_probs=26.0
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE--eCCC
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF--VDPS 234 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~~ 234 (452)
...|+|||+|.+|+.++..|.+.|..| ++..
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~ 37 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKR 37 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 357999999999999999999999976 5443
No 382
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=68.22 E-value=4.1 Score=38.62 Aligned_cols=29 Identities=7% Similarity=0.208 Sum_probs=26.6
Q ss_pred CCCceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 202 ICPLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 202 i~p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
.++.+|+|+|+|..|.-.+..+.++|.+|
T Consensus 143 ~~~k~vvViGgG~ig~E~A~~l~~~g~~V 171 (312)
T 4gcm_A 143 FKNKRLFVIGGGDSAVEEGTFLTKFADKV 171 (312)
T ss_dssp GTTCEEEEECCSHHHHHHHHHHTTTCSEE
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhcCCEE
Confidence 35789999999999999999999999987
No 383
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=68.20 E-value=3 Score=40.88 Aligned_cols=27 Identities=15% Similarity=0.132 Sum_probs=24.8
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCC-EE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPH-TF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa-~v 230 (452)
..+|+|+|+|.+|+.|++.|+.+|+ +|
T Consensus 168 g~~VlV~GaG~vG~~~~q~a~~~Ga~~V 195 (348)
T 2d8a_A 168 GKSVLITGAGPLGLLGIAVAKASGAYPV 195 (348)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEE
Confidence 4679999999999999999999999 66
No 384
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=68.13 E-value=4.7 Score=37.82 Aligned_cols=30 Identities=10% Similarity=0.230 Sum_probs=24.2
Q ss_pred CCCCceEEEEcCc---HHHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGSG---HASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~G---~vg~gAi~~a~~LGa~v 230 (452)
++.-.+++|||++ -.|++....+-+.||.|
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~V 35 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGAKL 35 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEE
Confidence 3455789999973 38888888899999987
No 385
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=68.09 E-value=4.1 Score=38.02 Aligned_cols=29 Identities=7% Similarity=-0.125 Sum_probs=24.8
Q ss_pred CCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 202 ICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 202 i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
+...+++|+|+ |-.|+...+.+.+.|+.|
T Consensus 6 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V 35 (255)
T 4eso_A 6 YQGKKAIVIGGTHGMGLATVRRLVEGGAEV 35 (255)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 45678999998 679999999999999987
No 386
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=68.08 E-value=4 Score=39.54 Aligned_cols=27 Identities=15% Similarity=0.031 Sum_probs=24.4
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
...|+|||+|.+|+.|+..+.+.|..|
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~~v 40 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNISC 40 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCE
Confidence 468999999999999999999999866
No 387
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=67.95 E-value=5.8 Score=39.68 Aligned_cols=38 Identities=16% Similarity=-0.002 Sum_probs=28.4
Q ss_pred cCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEeeecCCC
Q 012946 302 APYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLTCDMEG 349 (452)
Q Consensus 302 ~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs~D~gG 349 (452)
+..+|+|+.|.- .-.+++-+..++.|. .|||+|.|.-.
T Consensus 78 ~~~~DvVf~alg------~~~s~~~~~~~~~G~----~vIDlSa~~R~ 115 (352)
T 2nqt_A 78 LGGHDAVFLALP------HGHSAVLAQQLSPET----LIIDCGADFRL 115 (352)
T ss_dssp HTTCSEEEECCT------TSCCHHHHHHSCTTS----EEEECSSTTTC
T ss_pred hcCCCEEEECCC------CcchHHHHHHHhCCC----EEEEECCCccC
Confidence 347899999853 335888888884465 89999998753
No 388
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=67.92 E-value=4.3 Score=41.44 Aligned_cols=27 Identities=11% Similarity=0.103 Sum_probs=24.5
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
..+|+|+|.|++|+..++.+...|+.|
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~v 30 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKM 30 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCE
Confidence 357999999999999999999999966
No 389
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=67.84 E-value=12 Score=37.29 Aligned_cols=36 Identities=22% Similarity=0.454 Sum_probs=27.8
Q ss_pred CCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEeeecCC
Q 012946 303 PYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLTCDME 348 (452)
Q Consensus 303 ~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs~D~g 348 (452)
..+|+|+.|. |...+.+.....+.|. .|||+|.|.-
T Consensus 81 ~~vDvVf~at------p~~~s~~~a~~~~aG~----~VId~sa~~R 116 (359)
T 1xyg_A 81 STVDAVFCCL------PHGTTQEIIKELPTAL----KIVDLSADFR 116 (359)
T ss_dssp GGCSEEEECC------CTTTHHHHHHTSCTTC----EEEECSSTTT
T ss_pred cCCCEEEEcC------CchhHHHHHHHHhCCC----EEEECCcccc
Confidence 4789999884 6666788877775566 8999999864
No 390
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=67.80 E-value=3.3 Score=40.75 Aligned_cols=26 Identities=19% Similarity=0.161 Sum_probs=24.0
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
..|+|||+|.+|+.|+..|.+.|..|
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~~G~~V 30 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAERGHRV 30 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeE
Confidence 57999999999999999999999976
No 391
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=67.79 E-value=3.3 Score=39.06 Aligned_cols=26 Identities=15% Similarity=0.043 Sum_probs=23.6
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCC-EE
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPH-TF 230 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa-~v 230 (452)
..|+|+|+|.+|+.|+..+.+.|. .|
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v 28 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNA 28 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSE
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcE
Confidence 369999999999999999999998 76
No 392
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=67.77 E-value=8 Score=36.54 Aligned_cols=29 Identities=17% Similarity=-0.019 Sum_probs=24.7
Q ss_pred CCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 202 ICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 202 i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
+...+++|+|+ |-.|+..+..+.+.|+.|
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~G~~V 60 (275)
T 4imr_A 31 LRGRTALVTGSSRGIGAAIAEGLAGAGAHV 60 (275)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 45678999998 679999999999999987
No 393
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=67.75 E-value=3.9 Score=42.39 Aligned_cols=28 Identities=18% Similarity=0.211 Sum_probs=25.6
Q ss_pred CCceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 203 CPLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 203 ~p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
.+..|+|+|+|.+|+.|+..+.+.|..|
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V 118 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARV 118 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeE
Confidence 3678999999999999999999999977
No 394
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=67.64 E-value=7.3 Score=35.90 Aligned_cols=27 Identities=22% Similarity=0.186 Sum_probs=23.5
Q ss_pred CceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
..+++|+|+ |-.|+...+.+.+.|+.|
T Consensus 5 ~k~vlVTGas~giG~~ia~~l~~~G~~V 32 (245)
T 1uls_A 5 DKAVLITGAAHGIGRATLELFAKEGARL 32 (245)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 467899998 779999999999999987
No 395
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=67.52 E-value=3.5 Score=39.81 Aligned_cols=26 Identities=15% Similarity=0.250 Sum_probs=23.4
Q ss_pred ceEEEEcCcHHHHHHHHHHhc---CCCEE
Q 012946 205 LVFVFTGSGHASIAAQELFKL---LPHTF 230 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~---LGa~v 230 (452)
.+|+|||+|.+|+.+...|.+ .|..|
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V 30 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYL 30 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEE
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceE
Confidence 369999999999999999999 88876
No 396
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=67.48 E-value=4.9 Score=40.43 Aligned_cols=30 Identities=17% Similarity=0.148 Sum_probs=24.9
Q ss_pred ceEEEEcCcHHHHHHHHHHhc--CCCEE--eCCC
Q 012946 205 LVFVFTGSGHASIAAQELFKL--LPHTF--VDPS 234 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~--LGa~v--v~~~ 234 (452)
.+|+|||+|.+|+.|+..+.+ -|.+| +++.
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~ 36 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDR 36 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSS
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCC
Confidence 579999999999999999999 56766 5543
No 397
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=67.44 E-value=6.2 Score=36.85 Aligned_cols=29 Identities=14% Similarity=0.071 Sum_probs=24.7
Q ss_pred CCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 202 ICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 202 i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
+...+++|+|+ |-.|+.....+.+.|+.|
T Consensus 8 l~~k~vlVTGas~gIG~aia~~l~~~G~~V 37 (262)
T 3pk0_A 8 LQGRSVVVTGGTKGIGRGIATVFARAGANV 37 (262)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEE
Confidence 45678999998 679999999999999987
No 398
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=67.43 E-value=3.5 Score=41.70 Aligned_cols=26 Identities=12% Similarity=0.118 Sum_probs=24.4
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
.+|+|+|+|.+|+.+...|.+.|..|
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~G~~V 48 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQHDVDV 48 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCEE
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCeE
Confidence 57999999999999999999999987
No 399
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=67.39 E-value=5.3 Score=37.14 Aligned_cols=25 Identities=12% Similarity=0.089 Sum_probs=22.0
Q ss_pred eEEEEcC-cHHHHHHHHHHhcC--CCEE
Q 012946 206 VFVFTGS-GHASIAAQELFKLL--PHTF 230 (452)
Q Consensus 206 kv~V~G~-G~vg~gAi~~a~~L--Ga~v 230 (452)
+|+|+|+ |-+|...++.+.+. |++|
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V 29 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKKVPASQI 29 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTTSCGGGE
T ss_pred eEEEEcCCchHHHHHHHHHHHhCCCCeE
Confidence 6899998 99999999999888 8866
No 400
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=67.21 E-value=9.1 Score=34.88 Aligned_cols=28 Identities=21% Similarity=0.167 Sum_probs=24.2
Q ss_pred CCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 203 CPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 203 ~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
...+|+|+|+ |-.|+..++.+.+.|+.|
T Consensus 6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V 34 (258)
T 3afn_B 6 KGKRVLITGSSQGIGLATARLFARAGAKV 34 (258)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEE
Confidence 3467999988 889999999999999987
No 401
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=67.17 E-value=3.3 Score=40.91 Aligned_cols=27 Identities=22% Similarity=0.197 Sum_probs=24.5
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCC-EE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPH-TF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa-~v 230 (452)
-.+|+|+|+|.+|+.|++.|+.+|+ +|
T Consensus 191 g~~VlV~GaG~vG~~a~qlak~~Ga~~V 218 (371)
T 1f8f_A 191 ASSFVTWGAGAVGLSALLAAKVCGASII 218 (371)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHHTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeE
Confidence 3689999999999999999999999 55
No 402
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=67.13 E-value=3.1 Score=39.65 Aligned_cols=27 Identities=19% Similarity=0.031 Sum_probs=24.3
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
..+|+|+|+|.+|+.|+..|.+.|..|
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v 34 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKP 34 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeE
Confidence 467999999999999999999999865
No 403
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=67.12 E-value=9.9 Score=34.21 Aligned_cols=27 Identities=15% Similarity=0.071 Sum_probs=23.4
Q ss_pred CceEEEEcC-cHHHHHHHHHHhcC--CCEE
Q 012946 204 PLVFVFTGS-GHASIAAQELFKLL--PHTF 230 (452)
Q Consensus 204 p~kv~V~G~-G~vg~gAi~~a~~L--Ga~v 230 (452)
..+|+|+|+ |.+|...++.+.+. |+.|
T Consensus 4 ~~~ilVtGasG~iG~~l~~~l~~~~~g~~V 33 (253)
T 1xq6_A 4 LPTVLVTGASGRTGQIVYKKLKEGSDKFVA 33 (253)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTTTCEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhcCCCcEE
Confidence 467999996 99999999999988 7877
No 404
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=67.08 E-value=9 Score=35.50 Aligned_cols=28 Identities=14% Similarity=0.017 Sum_probs=24.2
Q ss_pred CCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 203 CPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 203 ~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
...+++|+|+ |-.|+..++.+.+.|+.|
T Consensus 8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V 36 (260)
T 2ae2_A 8 EGCTALVTGGSRGIGYGIVEELASLGASV 36 (260)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEE
Confidence 4568999998 779999999999999987
No 405
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=66.98 E-value=3.4 Score=39.08 Aligned_cols=30 Identities=13% Similarity=-0.045 Sum_probs=25.5
Q ss_pred CCCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
.+...+++|+|+ |-.|+..++.+.+.|+.|
T Consensus 25 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V 55 (270)
T 3ftp_A 25 TLDKQVAIVTGASRGIGRAIALELARRGAMV 55 (270)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 456678999998 679999999999999987
No 406
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=66.97 E-value=5.5 Score=37.68 Aligned_cols=27 Identities=15% Similarity=0.124 Sum_probs=22.9
Q ss_pred CceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
..+++|+|+ |-.|+..++.+.+.|+.|
T Consensus 24 ~k~~lVTGas~GIG~aia~~la~~G~~V 51 (279)
T 3sju_A 24 PQTAFVTGVSSGIGLAVARTLAARGIAV 51 (279)
T ss_dssp -CEEEEESTTSHHHHHHHHHHHHTTCEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEE
Confidence 467999998 679999999999999987
No 407
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=66.68 E-value=3.7 Score=41.13 Aligned_cols=25 Identities=8% Similarity=0.158 Sum_probs=23.0
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCCE
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPHT 229 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa~ 229 (452)
.+|+|||+|.+|+.|+..+.+.|..
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~ 27 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFE 27 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCC
T ss_pred CCEEEEcccHHHHHHHHHHHccCcC
Confidence 3799999999999999999999975
No 408
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=66.65 E-value=4.4 Score=34.62 Aligned_cols=27 Identities=11% Similarity=0.062 Sum_probs=24.2
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
..+|+|+|+|.+|...++.+.+.|+.|
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V 29 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNV 29 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCE
Confidence 357999999999999999999999966
No 409
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=66.63 E-value=3.6 Score=40.10 Aligned_cols=26 Identities=12% Similarity=0.047 Sum_probs=24.1
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
..|+|+|+|.+|+.|+..|.+.|..|
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~~G~~V 30 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAKYGLKT 30 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCE
Confidence 67999999999999999999999976
No 410
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=66.55 E-value=8 Score=36.25 Aligned_cols=29 Identities=17% Similarity=0.028 Sum_probs=24.8
Q ss_pred CCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 202 ICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 202 i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
+...+++|+|+ |-.|+..++.+.+.|+.|
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~~V 48 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGYAIVEELAGLGARV 48 (273)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHCCCEE
Confidence 34578999998 779999999999999987
No 411
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=66.55 E-value=4.7 Score=37.93 Aligned_cols=28 Identities=14% Similarity=0.185 Sum_probs=26.4
Q ss_pred CCceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 203 CPLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 203 ~p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
++.+|+|+|+|..|.-.+..+.++|.+|
T Consensus 151 ~~~~vvViGgG~ig~e~A~~l~~~G~~V 178 (314)
T 4a5l_A 151 RNKVLMVVGGGDAAMEEALHLTKYGSKV 178 (314)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEE
T ss_pred CCCeEEEECCChHHHHHHHHHHHhCCee
Confidence 5789999999999999999999999987
No 412
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=66.52 E-value=5.9 Score=38.31 Aligned_cols=27 Identities=7% Similarity=-0.096 Sum_probs=23.8
Q ss_pred CceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
..+|+|+|+ |..|...++.+.+.|+.|
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V 37 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPT 37 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCE
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCE
Confidence 468999998 999999999999999876
No 413
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=66.49 E-value=61 Score=32.57 Aligned_cols=36 Identities=11% Similarity=0.092 Sum_probs=30.7
Q ss_pred CCCCceEEEEcCc--HHHHHHHHHHhcCCCEE--eCCCCh
Q 012946 201 GICPLVFVFTGSG--HASIAAQELFKLLPHTF--VDPSRL 236 (452)
Q Consensus 201 ~i~p~kv~V~G~G--~vg~gAi~~a~~LGa~v--v~~~~l 236 (452)
++.-.||+++|-| +|+..-+..+..+|+.+ +.|+.+
T Consensus 177 ~l~glkva~vGD~~nnva~Sl~~~~~~lG~~v~~~~P~~~ 216 (365)
T 4amu_A 177 NLKNKKIVFIGDYKNNVGVSTMIGAAFNGMHVVMCGPDNY 216 (365)
T ss_dssp SCTTCEEEEESSTTSHHHHHHHHHHHHTTCEEEEESCGGG
T ss_pred CCCCCEEEEECCCCcchHHHHHHHHHHcCCEEEEECCccc
Confidence 4677899999998 78999999999999987 778765
No 414
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=66.44 E-value=3.6 Score=41.30 Aligned_cols=27 Identities=15% Similarity=0.202 Sum_probs=24.4
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
..+|+|||+|.+|+.|...+.+.|..|
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v 31 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLSV 31 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcE
Confidence 468999999999999999999999865
No 415
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=66.42 E-value=8.8 Score=37.04 Aligned_cols=30 Identities=10% Similarity=-0.068 Sum_probs=25.3
Q ss_pred CCCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
.+...+|+|+|+ |-.|+..+..+.+.|+.|
T Consensus 43 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V 73 (317)
T 3oec_A 43 RLQGKVAFITGAARGQGRTHAVRLAQDGADI 73 (317)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEE
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCeE
Confidence 345678999998 679999999999999987
No 416
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=66.37 E-value=6.3 Score=36.23 Aligned_cols=26 Identities=15% Similarity=-0.027 Sum_probs=22.8
Q ss_pred ceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
.+++|+|+ |-.|+.....+.+.|+.|
T Consensus 4 k~vlVTGas~GIG~a~a~~l~~~G~~V 30 (235)
T 3l6e_A 4 GHIIVTGAGSGLGRALTIGLVERGHQV 30 (235)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 57899998 679999999999999987
No 417
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=66.31 E-value=4.4 Score=41.23 Aligned_cols=31 Identities=23% Similarity=0.237 Sum_probs=26.8
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE--eCCC
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF--VDPS 234 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~~ 234 (452)
..+|+|||+|.+|+.|+..+.+.|..| ++..
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 36 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG 36 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 467999999999999999999999977 5544
No 418
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=66.29 E-value=3.9 Score=42.59 Aligned_cols=26 Identities=12% Similarity=0.078 Sum_probs=23.0
Q ss_pred ceEEEEcCcHHHHHHHHHHhcC--CCEE
Q 012946 205 LVFVFTGSGHASIAAQELFKLL--PHTF 230 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~L--Ga~v 230 (452)
.+|+|||+|.+|+.|+..+.+. |..|
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V 29 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEI 29 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEE
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCE
Confidence 3799999999999999999988 6765
No 419
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=66.24 E-value=5.4 Score=38.20 Aligned_cols=30 Identities=20% Similarity=0.161 Sum_probs=25.6
Q ss_pred CCCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
.+...+|+|+|+ |-.|+..+..+.+.|+.|
T Consensus 28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~V 58 (301)
T 3tjr_A 28 GFDGRAAVVTGGASGIGLATATEFARRGARL 58 (301)
T ss_dssp CSTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEE
Confidence 355678999998 679999999999999987
No 420
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=66.23 E-value=3.4 Score=42.06 Aligned_cols=27 Identities=15% Similarity=0.038 Sum_probs=24.3
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
...|+|||+|.+|+.|+..|.+.|..|
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~G~~V 53 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKRGRRV 53 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcE
Confidence 457999999999999999999999977
No 421
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=66.20 E-value=4.4 Score=41.33 Aligned_cols=27 Identities=19% Similarity=0.193 Sum_probs=24.8
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
..+|+|||+|.+|+.|...+.+.|..|
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v 39 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNV 39 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcE
Confidence 468999999999999999999999876
No 422
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=66.12 E-value=12 Score=36.56 Aligned_cols=23 Identities=22% Similarity=0.218 Sum_probs=20.0
Q ss_pred ceEEEEcC-cHHHHHHHHHHhcCC
Q 012946 205 LVFVFTGS-GHASIAAQELFKLLP 227 (452)
Q Consensus 205 ~kv~V~G~-G~vg~gAi~~a~~LG 227 (452)
+||+|+|+ |.+|...+..+...|
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~ 24 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSP 24 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCT
T ss_pred CEEEEECCCChHHHHHHHHHHhCC
Confidence 48999998 999999888887766
No 423
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=66.12 E-value=4.3 Score=42.28 Aligned_cols=31 Identities=16% Similarity=0.222 Sum_probs=26.6
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCCEE--eCCCC
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPHTF--VDPSR 235 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~~~ 235 (452)
.+|||+|+|-+|+.|+..+.+.+++| |+++.
T Consensus 43 prVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 43 PNVLILGSGWGAISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp CEEEEECSSHHHHHHHHHSCTTTCEEEEEESSS
T ss_pred CCEEEECCcHHHHHHHHHhhhCCCcEEEECCCC
Confidence 38999999999999999998889876 66653
No 424
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=66.11 E-value=3.4 Score=42.57 Aligned_cols=27 Identities=26% Similarity=0.242 Sum_probs=24.8
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
..+|+|+|+|.+|+.|+..|.+.|+.|
T Consensus 122 ~~~V~IIGgGpAGl~aA~~L~~~G~~V 148 (456)
T 2vdc_G 122 GLSVGVIGAGPAGLAAAEELRAKGYEV 148 (456)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHTCCE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeE
Confidence 468999999999999999999999976
No 425
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=66.09 E-value=15 Score=33.81 Aligned_cols=29 Identities=21% Similarity=0.161 Sum_probs=24.6
Q ss_pred CCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 202 ICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 202 i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
+...+++|+|+ |-.|+..++.+.+.|+.|
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V 34 (249)
T 2ew8_A 5 LKDKLAVITGGANGIGRAIAERFAVEGADI 34 (249)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEE
Confidence 34567999998 779999999999999987
No 426
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=65.98 E-value=6.2 Score=39.59 Aligned_cols=36 Identities=22% Similarity=0.318 Sum_probs=29.2
Q ss_pred cCCCcEEEeccccCCCCCcccCHHHHHHhhcCCCCeEEEEEeeecCC
Q 012946 302 APYASAIINCIYWEKQFPRLLSTQQLRDLAQKGCPLVGISDLTCDME 348 (452)
Q Consensus 302 ~~~~DIvIn~a~~~~~~P~Lit~e~l~~mk~gs~~l~vIvDvs~D~g 348 (452)
...+||++.| .|.=++++.+..+ .|. .|||+|.|.-
T Consensus 76 ~~~~Dvvf~a------lp~~~s~~~~~~~-~g~----~VIDlSsdfR 111 (351)
T 1vkn_A 76 SKNCDVLFTA------LPAGASYDLVREL-KGV----KIIDLGADFR 111 (351)
T ss_dssp HHHCSEEEEC------CSTTHHHHHHTTC-CSC----EEEESSSTTT
T ss_pred hcCCCEEEEC------CCcHHHHHHHHHh-CCC----EEEECChhhh
Confidence 3578999988 5667788888877 788 8999999863
No 427
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=65.89 E-value=6.3 Score=36.01 Aligned_cols=30 Identities=17% Similarity=0.106 Sum_probs=25.5
Q ss_pred CCCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
.+...+++|+|+ |-.|+..+..+.+.|+.|
T Consensus 11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~~V 41 (247)
T 3i1j_A 11 LLKGRVILVTGAARGIGAAAARAYAAHGASV 41 (247)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEE
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCCEE
Confidence 445678999998 779999999999999987
No 428
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=65.84 E-value=6 Score=37.06 Aligned_cols=30 Identities=13% Similarity=-0.030 Sum_probs=25.4
Q ss_pred CCCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
.+...+++|+|+ |-.|+.....+.+.|+.|
T Consensus 10 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V 40 (278)
T 3sx2_A 10 PLTGKVAFITGAARGQGRAHAVRLAADGADI 40 (278)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCeE
Confidence 445678999998 679999999999999987
No 429
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=65.82 E-value=3.7 Score=39.62 Aligned_cols=27 Identities=11% Similarity=0.149 Sum_probs=22.5
Q ss_pred CceEEEEcCcHHHHHHHHHHh--cCCCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFK--LLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~--~LGa~v 230 (452)
..-|+|||+|.+|+.|+..|. ++|..|
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V 93 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKV 93 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCE
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeE
Confidence 456999999999999887773 689876
No 430
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=65.76 E-value=3.6 Score=39.77 Aligned_cols=25 Identities=20% Similarity=0.177 Sum_probs=23.6
Q ss_pred eEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 206 VFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 206 kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
+|+|+|+ |.+|+.|++.|+.+|+.|
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~v 177 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTV 177 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCE
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEE
Confidence 6999998 999999999999999976
No 431
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=65.73 E-value=2.8 Score=42.65 Aligned_cols=27 Identities=11% Similarity=0.236 Sum_probs=22.7
Q ss_pred CceEEEEcCcHHHHHHHHHHhc-CCCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKL-LPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~-LGa~v 230 (452)
...|+|||+|.+|+.|+..|.+ .|..|
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~~G~~V 37 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQIDGPSW 37 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCCSCE
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCCCCE
Confidence 4679999999999999988765 58866
No 432
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=65.72 E-value=6.6 Score=36.26 Aligned_cols=26 Identities=12% Similarity=-0.103 Sum_probs=22.6
Q ss_pred ceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
.+|+|+|+ |-.|+...+.+.+.|+.|
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~~V 29 (247)
T 3dii_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKV 29 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 46899998 679999999999999987
No 433
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=65.72 E-value=4.5 Score=39.30 Aligned_cols=27 Identities=15% Similarity=0.137 Sum_probs=24.3
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
...|+|||+|.+|+.++..|.+.|..|
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~~V 32 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGYSV 32 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCEE
Confidence 367999999999999999998899977
No 434
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=65.69 E-value=5.8 Score=33.44 Aligned_cols=26 Identities=12% Similarity=0.015 Sum_probs=24.2
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
.+|+|+|.|.+|...++.+.+.|..|
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v 33 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPL 33 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCE
Confidence 57999999999999999999999976
No 435
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=65.60 E-value=2.9 Score=41.18 Aligned_cols=27 Identities=11% Similarity=-0.070 Sum_probs=24.5
Q ss_pred CceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
--+|+|+|+ |.+|+.|++.|+.+|+.+
T Consensus 168 g~~VlV~Ga~G~vG~~aiqlak~~Ga~v 195 (357)
T 1zsy_A 168 GDSVIQNASNSGVGQAVIQIAAALGLRT 195 (357)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHHTCEE
T ss_pred CCEEEEeCCcCHHHHHHHHHHHHcCCEE
Confidence 367999998 999999999999999965
No 436
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=65.58 E-value=7.8 Score=36.08 Aligned_cols=26 Identities=15% Similarity=0.272 Sum_probs=22.7
Q ss_pred ceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
.+|+|+|+ |-.|+..++.+.+.|+.|
T Consensus 4 k~vlVTGasg~IG~~la~~L~~~G~~V 30 (267)
T 3rft_A 4 KRLLVTGAAGQLGRVMRERLAPMAEIL 30 (267)
T ss_dssp EEEEEESTTSHHHHHHHHHTGGGEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCEE
Confidence 57999996 999999999988888876
No 437
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=65.55 E-value=4.6 Score=40.20 Aligned_cols=27 Identities=15% Similarity=0.176 Sum_probs=24.5
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCC-EE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPH-TF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa-~v 230 (452)
-.+|+|+|+|.+|+.|++.|+.+|+ +|
T Consensus 196 g~~VlV~GaG~vG~~aiqlak~~Ga~~V 223 (380)
T 1vj0_A 196 GKTVVIQGAGPLGLFGVVIARSLGAENV 223 (380)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBSEE
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCceE
Confidence 3689999999999999999999995 76
No 438
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=65.45 E-value=2.5 Score=42.28 Aligned_cols=24 Identities=21% Similarity=0.147 Sum_probs=22.3
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCC
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLP 227 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LG 227 (452)
..+|+|||+|.+|+.|+..|.+.|
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G 28 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEI 28 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHhc
Confidence 368999999999999999999998
No 439
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=65.43 E-value=3.5 Score=39.64 Aligned_cols=27 Identities=19% Similarity=0.012 Sum_probs=24.2
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
..+|+|+|+|.+|+.|+..+.+.|..|
T Consensus 14 ~~~vvIIG~G~aGl~aA~~l~~~g~~v 40 (335)
T 2a87_A 14 VRDVIVIGSGPAGYTAALYAARAQLAP 40 (335)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTTCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeE
Confidence 468999999999999999999988855
No 440
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=65.41 E-value=3.3 Score=38.04 Aligned_cols=28 Identities=14% Similarity=0.046 Sum_probs=24.0
Q ss_pred CCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 203 CPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 203 ~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
...+++|+|+ |-.|+..++.+.+.|+.|
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v 32 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASKGATV 32 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEE
Confidence 4568999998 779999999999999987
No 441
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=65.36 E-value=3.1 Score=40.90 Aligned_cols=26 Identities=23% Similarity=0.181 Sum_probs=24.3
Q ss_pred ceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
-+|+|+|+ |.+|+.|++.|+.+|+.+
T Consensus 169 ~~VlV~Ga~G~vG~~aiqlak~~Ga~v 195 (364)
T 1gu7_A 169 DWFIQNGGTSAVGKYASQIGKLLNFNS 195 (364)
T ss_dssp CEEEESCTTSHHHHHHHHHHHHHTCEE
T ss_pred cEEEECCCCcHHHHHHHHHHHHCCCEE
Confidence 68999998 999999999999999976
No 442
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=65.32 E-value=3.7 Score=39.66 Aligned_cols=27 Identities=22% Similarity=0.106 Sum_probs=24.4
Q ss_pred CceEEEEc-CcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTG-SGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G-~G~vg~gAi~~a~~LGa~v 230 (452)
-.+|+|+| +|.+|+.|++.|+.+|++|
T Consensus 153 g~~vlV~Ga~G~vG~~a~q~a~~~Ga~v 180 (321)
T 3tqh_A 153 GDVVLIHAGAGGVGHLAIQLAKQKGTTV 180 (321)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHcCCEE
Confidence 46789997 8999999999999999987
No 443
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=65.30 E-value=7.7 Score=36.59 Aligned_cols=29 Identities=17% Similarity=0.068 Sum_probs=24.9
Q ss_pred CCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 202 ICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 202 i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
+...+|+|+|+ |-.|+..+..+.+.|+.|
T Consensus 24 l~~k~vlITGasggiG~~la~~L~~~G~~V 53 (302)
T 1w6u_A 24 FQGKVAFITGGGTGLGKGMTTLLSSLGAQC 53 (302)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEE
Confidence 44578999998 789999999999999987
No 444
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=65.30 E-value=3.9 Score=41.95 Aligned_cols=25 Identities=16% Similarity=0.219 Sum_probs=23.3
Q ss_pred ceEEEEcCcHHHHHHHHHHhc---CCCE
Q 012946 205 LVFVFTGSGHASIAAQELFKL---LPHT 229 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~---LGa~ 229 (452)
.+|+|||+|.+|+.|+..|.+ .|..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~ 30 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAE 30 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCC
Confidence 479999999999999999999 8987
No 445
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=65.28 E-value=17 Score=35.98 Aligned_cols=36 Identities=17% Similarity=0.255 Sum_probs=27.6
Q ss_pred CCCcEEEeccccCCCCCcccCHHHHHHh-hcCCCCeEEEEEeeecCC
Q 012946 303 PYASAIINCIYWEKQFPRLLSTQQLRDL-AQKGCPLVGISDLTCDME 348 (452)
Q Consensus 303 ~~~DIvIn~a~~~~~~P~Lit~e~l~~m-k~gs~~l~vIvDvs~D~g 348 (452)
..+|+|+-|. |...+.+.+..+ +.|. .|||+|.|.-
T Consensus 67 ~~vDvV~~a~------g~~~s~~~a~~~~~aG~----~VId~Sa~~r 103 (345)
T 2ozp_A 67 EPADILVLAL------PHGVFAREFDRYSALAP----VLVDLSADFR 103 (345)
T ss_dssp CCCSEEEECC------CTTHHHHTHHHHHTTCS----EEEECSSTTS
T ss_pred cCCCEEEEcC------CcHHHHHHHHHHHHCCC----EEEEcCcccc
Confidence 6789999985 555677777666 6677 7999999854
No 446
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=65.21 E-value=3.6 Score=40.54 Aligned_cols=25 Identities=16% Similarity=0.222 Sum_probs=23.1
Q ss_pred eEEEEcCcHHHHHHHHHHhcC--CCEE
Q 012946 206 VFVFTGSGHASIAAQELFKLL--PHTF 230 (452)
Q Consensus 206 kv~V~G~G~vg~gAi~~a~~L--Ga~v 230 (452)
+|+|+|+|.+|+.++..+.+. |..|
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V 28 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAI 28 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEE
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCE
Confidence 699999999999999999998 9977
No 447
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=65.09 E-value=15 Score=34.42 Aligned_cols=29 Identities=10% Similarity=-0.018 Sum_probs=24.4
Q ss_pred CCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 202 ICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 202 i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
+...+++|+|+ |-.|+..+..+.+.|+.|
T Consensus 4 l~~k~~lVTGas~GIG~aia~~la~~G~~V 33 (274)
T 3e03_A 4 LSGKTLFITGASRGIGLAIALRAARDGANV 33 (274)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEE
Confidence 34578999998 669999999999999987
No 448
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=65.03 E-value=5.2 Score=37.76 Aligned_cols=26 Identities=15% Similarity=0.190 Sum_probs=22.8
Q ss_pred ceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
.+++|+|+ |-.|+..++.+.+.|+.|
T Consensus 5 k~~lVTGas~GIG~aia~~la~~G~~V 31 (264)
T 3tfo_A 5 KVILITGASGGIGEGIARELGVAGAKI 31 (264)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEE
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEE
Confidence 57899998 679999999999999987
No 449
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=64.95 E-value=4 Score=40.82 Aligned_cols=27 Identities=7% Similarity=0.041 Sum_probs=24.4
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCC-EE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPH-TF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa-~v 230 (452)
...|+|||+|.+|+.|+..|.+.|. .|
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~G~~~V 33 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARRGYTNV 33 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCCE
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCcE
Confidence 4679999999999999999999998 66
No 450
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=64.92 E-value=5.1 Score=38.05 Aligned_cols=30 Identities=13% Similarity=0.090 Sum_probs=24.6
Q ss_pred CCCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
.+...+++|+|+ |-.|+.....+.+.|+.|
T Consensus 26 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V 56 (277)
T 3gvc_A 26 DLAGKVAIVTGAGAGIGLAVARRLADEGCHV 56 (277)
T ss_dssp -CTTCEEEETTTTSTHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEE
Confidence 345678999998 669999999999999987
No 451
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=64.90 E-value=31 Score=33.82 Aligned_cols=30 Identities=10% Similarity=-0.081 Sum_probs=25.6
Q ss_pred CCCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
.+...+|+|+|+ |-.|+..+..+.+.|+.|
T Consensus 42 ~l~gk~vlVTGas~GIG~aia~~La~~Ga~V 72 (346)
T 3kvo_A 42 RLAGCTVFITGASRGIGKAIALKAAKDGANI 72 (346)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTCEE
T ss_pred CCCCCEEEEeCCChHHHHHHHHHHHHCCCEE
Confidence 456688999998 679999999999999987
No 452
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=64.85 E-value=7.2 Score=40.15 Aligned_cols=27 Identities=11% Similarity=0.105 Sum_probs=24.2
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
-.|..|+|.|.+|+.....+.+.|..|
T Consensus 11 ~~~~~ViGlGyvGlp~A~~La~~G~~V 37 (431)
T 3ojo_A 11 GSKLTVVGLGYIGLPTSIMFAKHGVDV 37 (431)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHTTCEE
T ss_pred CCccEEEeeCHHHHHHHHHHHHCCCEE
Confidence 478999999999999999999999987
No 453
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=64.79 E-value=3.9 Score=39.07 Aligned_cols=27 Identities=11% Similarity=0.090 Sum_probs=24.8
Q ss_pred CceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
-.+|+|+|+ |.+|+.|++.|+.+|++|
T Consensus 126 g~~vlV~Ga~G~vG~~~~~~a~~~Ga~V 153 (302)
T 1iz0_A 126 GEKVLVQAAAGALGTAAVQVARAMGLRV 153 (302)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHTTCEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEE
Confidence 367999998 999999999999999977
No 454
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=64.68 E-value=8.7 Score=39.81 Aligned_cols=27 Identities=30% Similarity=0.356 Sum_probs=24.5
Q ss_pred CceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
+++|+|+|+ |-+|..-++.+.+.|+.|
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V 174 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEV 174 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 789999996 999999999998888876
No 455
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=64.59 E-value=9.1 Score=36.30 Aligned_cols=28 Identities=18% Similarity=-0.003 Sum_probs=24.1
Q ss_pred CCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 203 CPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 203 ~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
...+++|+|+ |-.|+..+..+.+.|+.|
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V 55 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALAADGVTV 55 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 4568899998 679999999999999987
No 456
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=64.54 E-value=4 Score=41.54 Aligned_cols=30 Identities=20% Similarity=0.121 Sum_probs=26.1
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCCEE--eCCC
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPHTF--VDPS 234 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~~ 234 (452)
.+|+|||+|.+|+.|+..|.++|..| ++..
T Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 34 (468)
T 2qae_A 3 YDVVVIGGGPGGYVASIKAAQLGMKTACVEKR 34 (468)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 57999999999999999999999976 5444
No 457
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=64.50 E-value=5.3 Score=37.64 Aligned_cols=30 Identities=10% Similarity=-0.016 Sum_probs=25.4
Q ss_pred CCCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
.+...+|+|+|+ |-.|+..++.+.+.|+.|
T Consensus 25 ~l~~k~vlVTGas~gIG~aia~~la~~G~~V 55 (269)
T 4dmm_A 25 PLTDRIALVTGASRGIGRAIALELAAAGAKV 55 (269)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 345678999998 679999999999999987
No 458
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=64.47 E-value=9.4 Score=35.60 Aligned_cols=30 Identities=23% Similarity=0.225 Sum_probs=25.2
Q ss_pred CCCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
.+...+++|+|+ |-.|+...+.+.+.|+.|
T Consensus 5 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V 35 (265)
T 3lf2_A 5 DLSEAVAVVTGGSSGIGLATVELLLEAGAAV 35 (265)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEE
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHCCCEE
Confidence 345678999998 669999999999999987
No 459
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=64.43 E-value=13 Score=36.65 Aligned_cols=63 Identities=14% Similarity=0.131 Sum_probs=41.8
Q ss_pred CCCcccccccccCcc--HHHHHHHHHHhhHHHHhcCCCCCCCCceEEEEcC-cHHHHHHHHHHhcCCCEE--eCCCCh
Q 012946 164 STPFLTLGAAYMYPS--LAAAKAAIISVGEEIATEGLPSGICPLVFVFTGS-GHASIAAQELFKLLPHTF--VDPSRL 236 (452)
Q Consensus 164 ~~P~~~~~~~~~~~~--~~~~~~~~~~~g~~i~~~G~~~~i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v--v~~~~l 236 (452)
..|..+-+..+.+++ +.++..-.+. -| ++.-.||+++|- ++|+..-+..+..+|+++ +.|+.+
T Consensus 122 ~vPVINag~~~~HPtQaLaDl~Ti~e~-------~g---~l~glkva~vGD~~~va~Sl~~~~~~~G~~v~~~~P~~~ 189 (309)
T 4f2g_A 122 RVPVINGLTNEYHPCQVLADIFTYYEH-------RG---PIRGKTVAWVGDANNMLYTWIQAARILDFKLQLSTPPGY 189 (309)
T ss_dssp SSCEEEEECSSCCHHHHHHHHHHHHHH-------HS---CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCGGG
T ss_pred CCCEEECCCCccCcHHHHHHHHHHHHH-------hC---CCCCCEEEEECCCcchHHHHHHHHHHcCCEEEEECCccc
Confidence 468887764444443 2222222222 22 566789999998 679999999999999977 777655
No 460
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=64.37 E-value=4.7 Score=39.16 Aligned_cols=28 Identities=14% Similarity=0.062 Sum_probs=25.0
Q ss_pred CCceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 203 CPLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 203 ~p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
+.-+|+|+|+|-+|+.|++.|+.+|+.+
T Consensus 160 ~g~~VlV~GaG~vG~~aiq~ak~~G~~~ 187 (346)
T 4a2c_A 160 ENKNVIIIGAGTIGLLAIQCAVALGAKS 187 (346)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSE
T ss_pred CCCEEEEECCCCcchHHHHHHHHcCCcE
Confidence 3568999999999999999999999953
No 461
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=64.34 E-value=5.7 Score=39.28 Aligned_cols=27 Identities=19% Similarity=0.159 Sum_probs=24.7
Q ss_pred CceEEEEc-CcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTG-SGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G-~G~vg~gAi~~a~~LGa~v 230 (452)
..+|+|+| +|.+|+.|++.|+.+|+.|
T Consensus 184 g~~VlV~Ga~G~vG~~~~qla~~~Ga~V 211 (375)
T 2vn8_A 184 GKRVLILGASGGVGTFAIQVMKAWDAHV 211 (375)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEE
Confidence 46899999 6999999999999999977
No 462
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=64.18 E-value=16 Score=34.36 Aligned_cols=25 Identities=16% Similarity=0.198 Sum_probs=22.4
Q ss_pred eEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 206 VFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 206 kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
+|+|+|+ |-.|..-++.+.+.|.++
T Consensus 3 ~vlVTGatG~iG~~l~~~L~~~g~~v 28 (313)
T 3ehe_A 3 LIVVTGGAGFIGSHVVDKLSESNEIV 28 (313)
T ss_dssp CEEEETTTSHHHHHHHHHHTTTSCEE
T ss_pred EEEEECCCchHHHHHHHHHHhCCCEE
Confidence 6899997 999999999999999766
No 463
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=64.15 E-value=4 Score=39.45 Aligned_cols=25 Identities=16% Similarity=0.139 Sum_probs=23.6
Q ss_pred eEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 206 VFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 206 kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
+|+|+|+ |.+|+.|++.|+.+|++|
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~v 178 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRGYDV 178 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHTCCE
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEE
Confidence 6999998 999999999999999976
No 464
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=64.13 E-value=8.7 Score=37.99 Aligned_cols=35 Identities=11% Similarity=-0.104 Sum_probs=28.3
Q ss_pred CCCcEEEeccccCCCCCcccCHHHHHHh-hcCCCCeEEEEEeeecC
Q 012946 303 PYASAIINCIYWEKQFPRLLSTQQLRDL-AQKGCPLVGISDLTCDM 347 (452)
Q Consensus 303 ~~~DIvIn~a~~~~~~P~Lit~e~l~~m-k~gs~~l~vIvDvs~D~ 347 (452)
..+|+|+.|. |...+++.+..+ +.|. +|||+|+|.
T Consensus 64 ~~vDvVf~a~------g~~~s~~~a~~~~~~G~----~vId~s~~~ 99 (336)
T 2r00_A 64 SQVHIALFSA------GGELSAKWAPIAAEAGV----VVIDNTSHF 99 (336)
T ss_dssp GGCSEEEECS------CHHHHHHHHHHHHHTTC----EEEECSSTT
T ss_pred cCCCEEEECC------CchHHHHHHHHHHHcCC----EEEEcCCcc
Confidence 4689999884 666788888877 6677 899999985
No 465
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=64.09 E-value=3.4 Score=40.08 Aligned_cols=26 Identities=19% Similarity=0.132 Sum_probs=23.8
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
..|+|||+|.+|+.++..|.+.|..|
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~~G~~V 28 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATRAGLNV 28 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHHTTCCE
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeE
Confidence 46999999999999999999999976
No 466
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=64.03 E-value=6 Score=40.83 Aligned_cols=34 Identities=9% Similarity=0.015 Sum_probs=29.2
Q ss_pred CCCceEEEEcCcHHHHHHHHHHhcCCCEE--eCCCC
Q 012946 202 ICPLVFVFTGSGHASIAAQELFKLLPHTF--VDPSR 235 (452)
Q Consensus 202 i~p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~~~ 235 (452)
+.-.+|+|+|+|.+|...+..+...||.| ++++.
T Consensus 10 l~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~ 45 (457)
T 1pjq_A 10 LRDRDCLIVGGGDVAERKARLLLEAGARLTVNALTF 45 (457)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCC
Confidence 44578999999999999999999999976 66643
No 467
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=64.01 E-value=18 Score=32.47 Aligned_cols=26 Identities=12% Similarity=0.018 Sum_probs=22.5
Q ss_pred ceEEEEcC-cHHHHHHHHHHhcCC--CEE
Q 012946 205 LVFVFTGS-GHASIAAQELFKLLP--HTF 230 (452)
Q Consensus 205 ~kv~V~G~-G~vg~gAi~~a~~LG--a~v 230 (452)
.+|+|+|+ |-.|+..++.+.+.| +.|
T Consensus 4 k~vlItGasggiG~~la~~l~~~g~~~~V 32 (250)
T 1yo6_A 4 GSVVVTGANRGIGLGLVQQLVKDKNIRHI 32 (250)
T ss_dssp SEEEESSCSSHHHHHHHHHHHTCTTCCEE
T ss_pred CEEEEecCCchHHHHHHHHHHhcCCCcEE
Confidence 57889988 789999999999999 876
No 468
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=63.95 E-value=9.7 Score=35.26 Aligned_cols=26 Identities=19% Similarity=0.141 Sum_probs=22.9
Q ss_pred ceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
.+++|+|+ |-.|+.....+.+.|+.|
T Consensus 5 k~vlVTGas~gIG~~ia~~l~~~G~~V 31 (260)
T 1x1t_A 5 KVAVVTGSTSGIGLGIATALAAQGADI 31 (260)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHcCCEE
Confidence 57899997 779999999999999987
No 469
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=63.88 E-value=5 Score=39.26 Aligned_cols=23 Identities=26% Similarity=0.271 Sum_probs=19.0
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCC
Q 012946 205 LVFVFTGSGHASIAAQELFKLLP 227 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LG 227 (452)
.||+|+|+|.+|...+-.+...|
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~ 23 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLG 23 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCC
Confidence 48999999999998777776655
No 470
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=63.83 E-value=6.1 Score=42.45 Aligned_cols=26 Identities=15% Similarity=-0.045 Sum_probs=24.5
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
..|+|||+|.+|+.|+..|.+.|..|
T Consensus 273 ~DVvIIGgGiaGlsaA~~La~~G~~V 298 (676)
T 3ps9_A 273 REAAIIGGGIASALLSLALLRRGWQV 298 (676)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEE
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeE
Confidence 68999999999999999999999977
No 471
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=63.76 E-value=13 Score=36.42 Aligned_cols=36 Identities=17% Similarity=0.162 Sum_probs=29.6
Q ss_pred CCCCceEEEEcCc---HHHHHHHHHHhcCCCEE--eCCCCh
Q 012946 201 GICPLVFVFTGSG---HASIAAQELFKLLPHTF--VDPSRL 236 (452)
Q Consensus 201 ~i~p~kv~V~G~G---~vg~gAi~~a~~LGa~v--v~~~~l 236 (452)
++.-.||+++|-| +++..-+..+..+|+++ +.|+.+
T Consensus 144 ~l~glkva~vGD~~~~rva~Sl~~~~~~~G~~v~~~~P~~~ 184 (304)
T 3r7f_A 144 TFKGLTVSIHGDIKHSRVARSNAEVLTRLGARVLFSGPSEW 184 (304)
T ss_dssp CCTTCEEEEESCCTTCHHHHHHHHHHHHTTCEEEEESCGGG
T ss_pred CCCCCEEEEEcCCCCcchHHHHHHHHHHcCCEEEEECCCcc
Confidence 5667899999985 79999999999999976 666444
No 472
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=63.74 E-value=3.1 Score=41.10 Aligned_cols=26 Identities=12% Similarity=0.035 Sum_probs=21.2
Q ss_pred CCceEEEEcCcHHHHHHHHHHhcCCC
Q 012946 203 CPLVFVFTGSGHASIAAQELFKLLPH 228 (452)
Q Consensus 203 ~p~kv~V~G~G~vg~gAi~~a~~LGa 228 (452)
+..||+|+|+|.+|...+-.+...|.
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~~~ 33 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQGI 33 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTC
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCC
Confidence 46899999999999987777766554
No 473
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=63.70 E-value=3.2 Score=40.83 Aligned_cols=25 Identities=12% Similarity=0.009 Sum_probs=20.4
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCC
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPH 228 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa 228 (452)
..||+|+|+|.+|...+-.+...|.
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~ 29 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGI 29 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTC
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCC
Confidence 4799999999999987777766554
No 474
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=63.68 E-value=5.3 Score=40.73 Aligned_cols=28 Identities=18% Similarity=0.114 Sum_probs=25.4
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCCEE--eC
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPHTF--VD 232 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa~v--v~ 232 (452)
..|+|||+|.+|+.|+..|.++|..| +.
T Consensus 5 ~DVvVIGgG~aGl~aA~~l~~~G~~V~liE 34 (466)
T 3l8k_A 5 YDVVVIGAGGAGYHGAFRLAKAKYNVLMAD 34 (466)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCeEEEEE
Confidence 57999999999999999999999977 65
No 475
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=63.66 E-value=11 Score=35.66 Aligned_cols=30 Identities=17% Similarity=0.143 Sum_probs=25.2
Q ss_pred CCCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 201 GICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
.+...+++|+|+ |-.|+..+..+.+.|+.|
T Consensus 22 ~l~~k~~lVTGas~GIG~~ia~~la~~G~~V 52 (281)
T 3v2h_A 22 SMMTKTAVITGSTSGIGLAIARTLAKAGANI 52 (281)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEE
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEE
Confidence 345578999998 679999999999999987
No 476
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=63.54 E-value=4 Score=38.00 Aligned_cols=28 Identities=7% Similarity=-0.117 Sum_probs=23.9
Q ss_pred CCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 203 CPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 203 ~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
...+++|+|+ |-.|+...+.+.+.|+.|
T Consensus 6 ~~k~~lVTGas~GIG~aia~~l~~~G~~V 34 (250)
T 3nyw_A 6 QKGLAIITGASQGIGAVIAAGLATDGYRV 34 (250)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHHTCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEE
Confidence 4578999998 679999999888999987
No 477
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=63.45 E-value=3.8 Score=41.77 Aligned_cols=32 Identities=16% Similarity=0.106 Sum_probs=27.0
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE--eCCCC
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF--VDPSR 235 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~~~ 235 (452)
..+|+|||+|.+|+.|+..+.++|..| ++...
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~ 38 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQA 38 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEccCC
Confidence 357999999999999999999999976 65543
No 478
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=63.38 E-value=4.3 Score=41.62 Aligned_cols=31 Identities=13% Similarity=0.201 Sum_probs=26.7
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE--eCCC
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF--VDPS 234 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v--v~~~ 234 (452)
..+|+|||+|.+|+.|+..|.+.|+.| ++..
T Consensus 11 ~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~ 43 (479)
T 2hqm_A 11 HYDYLVIGGGSGGVASARRAASYGAKTLLVEAK 43 (479)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTSCCEEEEESS
T ss_pred cCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC
Confidence 468999999999999999999999977 5443
No 479
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=63.24 E-value=6.9 Score=35.95 Aligned_cols=29 Identities=24% Similarity=0.093 Sum_probs=25.0
Q ss_pred CCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 202 ICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 202 i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
+...+|+|+|+ |-.|+..++.+.+.|+.|
T Consensus 7 ~~~k~vlITGas~giG~~~a~~l~~~G~~V 36 (253)
T 3qiv_A 7 FENKVGIVTGSGGGIGQAYAEALAREGAAV 36 (253)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEE
Confidence 45678999998 779999999999999987
No 480
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=63.18 E-value=4.3 Score=41.07 Aligned_cols=31 Identities=19% Similarity=0.234 Sum_probs=0.0
Q ss_pred ceEEEEcCcHHHHHHHHHHhcC--CCEE--eCCCC
Q 012946 205 LVFVFTGSGHASIAAQELFKLL--PHTF--VDPSR 235 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~L--Ga~v--v~~~~ 235 (452)
.+|+|||+|.+|+.|+..+.++ |..| ++...
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~ 35 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGD 35 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCC
No 481
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=63.18 E-value=4.9 Score=41.21 Aligned_cols=29 Identities=17% Similarity=0.094 Sum_probs=26.8
Q ss_pred CCCceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 202 ICPLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 202 i~p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
+...+|+|+|.|..|.++++.+.++|+.|
T Consensus 7 ~~~k~v~viG~G~sG~s~A~~l~~~G~~V 35 (451)
T 3lk7_A 7 FENKKVLVLGLARSGEAAARLLAKLGAIV 35 (451)
T ss_dssp TTTCEEEEECCTTTHHHHHHHHHHTTCEE
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCCCEE
Confidence 35689999999999999999999999988
No 482
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=63.12 E-value=4.4 Score=40.52 Aligned_cols=26 Identities=19% Similarity=0.211 Sum_probs=24.0
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHT 229 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~ 229 (452)
..+|+|||+|.+|+.|+..+.+.|..
T Consensus 9 ~~~vvIIGaG~aGl~aA~~L~~~g~~ 34 (415)
T 3lxd_A 9 RADVVIVGAGHGGAQAAIALRQNGFE 34 (415)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC
T ss_pred CCcEEEECChHHHHHHHHHHHccCcC
Confidence 57899999999999999999999875
No 483
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=63.11 E-value=10 Score=34.73 Aligned_cols=27 Identities=15% Similarity=-0.058 Sum_probs=23.4
Q ss_pred CceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
..+++|+|+ |-.|+..++.+.+.|+.|
T Consensus 4 ~k~vlVTGas~giG~~ia~~l~~~G~~V 31 (246)
T 2uvd_A 4 GKVALVTGASRGIGRAIAIDLAKQGANV 31 (246)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEE
Confidence 357899987 779999999999999987
No 484
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=63.08 E-value=4.9 Score=40.62 Aligned_cols=27 Identities=19% Similarity=0.139 Sum_probs=24.4
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCC--CEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLP--HTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LG--a~v 230 (452)
..+|+|||+|.+|+.|...+.+.| ..|
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v 32 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNI 32 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEE
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCE
Confidence 468999999999999999999999 766
No 485
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=62.99 E-value=9.4 Score=38.24 Aligned_cols=37 Identities=8% Similarity=-0.024 Sum_probs=29.9
Q ss_pred cCCCcEEEeccccCCCCCcccCHHHHHHh-hcCCCCeEEEEEeeecCC
Q 012946 302 APYASAIINCIYWEKQFPRLLSTQQLRDL-AQKGCPLVGISDLTCDME 348 (452)
Q Consensus 302 ~~~~DIvIn~a~~~~~~P~Lit~e~l~~m-k~gs~~l~vIvDvs~D~g 348 (452)
+..+||++-| .|.-++++..... +.|. .|||+|+|.-
T Consensus 77 ~~~vDvvf~a------~p~~~s~~~a~~~~~~G~----~vIDlSa~~R 114 (359)
T 4dpk_A 77 MDDVDIIFSP------LPQGAAGPVEEQFAKEGF----PVISNSPDHR 114 (359)
T ss_dssp CTTCCEEEEC------CCTTTHHHHHHHHHHTTC----EEEECSSTTT
T ss_pred hcCCCEEEEC------CChHHHHHHHHHHHHCCC----EEEEcCCCcc
Confidence 4689999988 5667788887776 7788 9999999953
No 486
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=62.99 E-value=9.4 Score=38.24 Aligned_cols=37 Identities=8% Similarity=-0.024 Sum_probs=29.9
Q ss_pred cCCCcEEEeccccCCCCCcccCHHHHHHh-hcCCCCeEEEEEeeecCC
Q 012946 302 APYASAIINCIYWEKQFPRLLSTQQLRDL-AQKGCPLVGISDLTCDME 348 (452)
Q Consensus 302 ~~~~DIvIn~a~~~~~~P~Lit~e~l~~m-k~gs~~l~vIvDvs~D~g 348 (452)
+..+||++-| .|.-++++..... +.|. .|||+|+|.-
T Consensus 77 ~~~vDvvf~a------~p~~~s~~~a~~~~~~G~----~vIDlSa~~R 114 (359)
T 4dpl_A 77 MDDVDIIFSP------LPQGAAGPVEEQFAKEGF----PVISNSPDHR 114 (359)
T ss_dssp CTTCCEEEEC------CCTTTHHHHHHHHHHTTC----EEEECSSTTT
T ss_pred hcCCCEEEEC------CChHHHHHHHHHHHHCCC----EEEEcCCCcc
Confidence 4689999988 5667788887776 7788 9999999953
No 487
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=62.97 E-value=40 Score=33.28 Aligned_cols=36 Identities=8% Similarity=0.150 Sum_probs=30.5
Q ss_pred CCCCceEEEEcC-cHHHHHHHHHHhcCCCEE--eCCCCh
Q 012946 201 GICPLVFVFTGS-GHASIAAQELFKLLPHTF--VDPSRL 236 (452)
Q Consensus 201 ~i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v--v~~~~l 236 (452)
++.-.||+++|- +||+..-+..+..+|+++ +.|+.+
T Consensus 154 ~l~glkva~vGD~~rva~Sl~~~~~~~G~~v~~~~P~~~ 192 (323)
T 3gd5_A 154 RLAGLKLAYVGDGNNVAHSLLLGCAKVGMSIAVATPEGF 192 (323)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHHHHHTCEEEEECCTTC
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEECCCcc
Confidence 567789999998 679999999999999987 778765
No 488
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=62.94 E-value=8.9 Score=35.76 Aligned_cols=29 Identities=24% Similarity=0.176 Sum_probs=24.0
Q ss_pred CCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 202 ICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 202 i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
+...+|+|+|+ |-.|+..++.+.+.|+.|
T Consensus 32 l~~k~vlITGasggIG~~la~~L~~~G~~V 61 (279)
T 3ctm_A 32 LKGKVASVTGSSGGIGWAVAEAYAQAGADV 61 (279)
T ss_dssp CTTCEEEETTTTSSHHHHHHHHHHHHTCEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEE
Confidence 34568999987 779999888888889987
No 489
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=62.92 E-value=4.2 Score=41.99 Aligned_cols=26 Identities=8% Similarity=0.042 Sum_probs=22.4
Q ss_pred ceEEEEcCcHHHHHHHHHHhcC--CCEE
Q 012946 205 LVFVFTGSGHASIAAQELFKLL--PHTF 230 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~L--Ga~v 230 (452)
.+|.|+|+|.+|+.-...+.+. |..|
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V 33 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRV 33 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEE
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEE
Confidence 6899999999999988877777 7776
No 490
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=62.88 E-value=10 Score=35.98 Aligned_cols=26 Identities=15% Similarity=-0.009 Sum_probs=23.1
Q ss_pred ceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
.+|+|+|+ |..|...++.+.+.|+.|
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V 38 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPT 38 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCE
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcE
Confidence 37999996 999999999999999876
No 491
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=62.86 E-value=6.5 Score=42.30 Aligned_cols=27 Identities=19% Similarity=0.110 Sum_probs=25.2
Q ss_pred CceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
+.+|+|+|+|.+|+.|+..|.+.|..|
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g~~V 399 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARGHQV 399 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeE
Confidence 468999999999999999999999977
No 492
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=62.86 E-value=6.2 Score=38.58 Aligned_cols=27 Identities=11% Similarity=0.064 Sum_probs=24.8
Q ss_pred CceEEEEc-CcHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTG-SGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G-~G~vg~gAi~~a~~LGa~v 230 (452)
..+|+|+| +|.+|+.|++.|+.+|++|
T Consensus 151 g~~VlV~Ga~g~iG~~~~q~a~~~Ga~V 178 (343)
T 3gaz_A 151 GQTVLIQGGGGGVGHVAIQIALARGARV 178 (343)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEE
Confidence 46799999 6999999999999999987
No 493
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=62.75 E-value=3.3 Score=40.69 Aligned_cols=26 Identities=12% Similarity=0.130 Sum_probs=23.7
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
..|+|+|+|.+|+.++..+.+.|..|
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~v 28 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGIDN 28 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCE
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCCE
Confidence 46999999999999999999999976
No 494
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=62.59 E-value=21 Score=33.28 Aligned_cols=29 Identities=17% Similarity=0.049 Sum_probs=24.8
Q ss_pred CCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 202 ICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 202 i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
+...+++|+|+ |-.|+..++.+.+.|+.|
T Consensus 7 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V 36 (270)
T 1yde_A 7 YAGKVVVVTGGGRGIGAGIVRAFVNSGARV 36 (270)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEE
Confidence 44578999998 779999999999999987
No 495
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=62.55 E-value=12 Score=36.60 Aligned_cols=27 Identities=22% Similarity=0.213 Sum_probs=24.1
Q ss_pred CceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 204 PLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 204 p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
..+|+|+|+ |-+|..-++.+.+.|+.|
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~~g~~V 56 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKHEGHYV 56 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEE
T ss_pred CCeEEEECCccHHHHHHHHHHHHCCCeE
Confidence 468999998 999999999998889877
No 496
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=62.49 E-value=4.6 Score=41.40 Aligned_cols=26 Identities=23% Similarity=0.312 Sum_probs=24.4
Q ss_pred ceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 205 LVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 205 ~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
..|+|||+|.+|+.|+..|.+.|..|
T Consensus 27 ~DVvVIGgG~aGl~aA~~la~~G~~V 52 (484)
T 3o0h_A 27 FDLFVIGSGSGGVRAARLAGALGKRV 52 (484)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCE
T ss_pred CCEEEECcCHHHHHHHHHHHhCcCEE
Confidence 57999999999999999999999977
No 497
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=62.49 E-value=4.5 Score=41.58 Aligned_cols=28 Identities=14% Similarity=0.061 Sum_probs=24.7
Q ss_pred CCceEEEEcCcHHHHHHHHHHhcCC--CEE
Q 012946 203 CPLVFVFTGSGHASIAAQELFKLLP--HTF 230 (452)
Q Consensus 203 ~p~kv~V~G~G~vg~gAi~~a~~LG--a~v 230 (452)
.|.+|+|||+|.+|+.|+..+.++| ..|
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V 34 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHV 34 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEE
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCE
Confidence 4689999999999999999999988 765
No 498
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=62.46 E-value=24 Score=32.32 Aligned_cols=30 Identities=17% Similarity=0.212 Sum_probs=24.0
Q ss_pred CCCCceEEEEcC-cHHHHHHHHHHhcCC---CEE
Q 012946 201 GICPLVFVFTGS-GHASIAAQELFKLLP---HTF 230 (452)
Q Consensus 201 ~i~p~kv~V~G~-G~vg~gAi~~a~~LG---a~v 230 (452)
.+...+|+|+|+ |-.|+..++.+.+.| +.|
T Consensus 18 ~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V 51 (267)
T 1sny_A 18 GSHMNSILITGCNRGLGLGLVKALLNLPQPPQHL 51 (267)
T ss_dssp --CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEE
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEE
Confidence 345568999988 889999999999999 776
No 499
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=62.45 E-value=4.2 Score=41.49 Aligned_cols=28 Identities=18% Similarity=0.121 Sum_probs=25.9
Q ss_pred CCceEEEEcCcHHHHHHHHHHhcCCCEE
Q 012946 203 CPLVFVFTGSGHASIAAQELFKLLPHTF 230 (452)
Q Consensus 203 ~p~kv~V~G~G~vg~gAi~~a~~LGa~v 230 (452)
...+|+|+|.|..|..|++.|.+.|+.|
T Consensus 4 ~~~~v~viG~G~~G~~~a~~l~~~G~~v 31 (439)
T 2x5o_A 4 QGKNVVIIGLGLTGLSCVDFFLARGVTP 31 (439)
T ss_dssp TTCCEEEECCHHHHHHHHHHHHTTTCCC
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCCCEE
Confidence 4578999999999999999999999987
No 500
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=62.45 E-value=22 Score=33.37 Aligned_cols=29 Identities=10% Similarity=-0.047 Sum_probs=24.7
Q ss_pred CCCceEEEEcC-cHHHHHHHHHHhcCCCEE
Q 012946 202 ICPLVFVFTGS-GHASIAAQELFKLLPHTF 230 (452)
Q Consensus 202 i~p~kv~V~G~-G~vg~gAi~~a~~LGa~v 230 (452)
+...+|+|+|+ |-.|+..++.+.+.|+.|
T Consensus 42 l~~k~vlITGasggIG~~la~~L~~~G~~V 71 (285)
T 2c07_A 42 GENKVALVTGAGRGIGREIAKMLAKSVSHV 71 (285)
T ss_dssp CSSCEEEEESTTSHHHHHHHHHHTTTSSEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHcCCEE
Confidence 34568999988 789999999999999987
Done!