Query 012947
Match_columns 452
No_of_seqs 311 out of 2472
Neff 7.4
Searched_HMMs 46136
Date Fri Mar 29 07:58:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012947.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012947hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2733 Uncharacterized membra 100.0 3.2E-94 7E-99 696.3 31.0 411 10-447 5-422 (423)
2 COG3268 Uncharacterized conser 100.0 6.3E-56 1.4E-60 427.1 26.4 368 6-445 2-380 (382)
3 PF03435 Saccharop_dh: Sacchar 99.9 1.8E-24 3.9E-29 222.8 16.0 150 13-180 1-151 (386)
4 COG1748 LYS9 Saccharopine dehy 99.8 3.2E-17 7E-22 166.2 17.9 152 11-181 2-153 (389)
5 COG0300 DltE Short-chain dehyd 99.5 1.4E-14 3.1E-19 140.2 9.4 149 9-167 5-162 (265)
6 PLN02819 lysine-ketoglutarate 99.4 1.7E-11 3.6E-16 138.2 19.1 159 9-181 568-733 (1042)
7 COG4221 Short-chain alcohol de 99.4 3.4E-12 7.3E-17 120.9 10.4 119 11-143 7-134 (246)
8 KOG1502 Flavonol reductase/cin 99.3 1.3E-11 2.8E-16 122.3 12.5 87 9-103 5-93 (327)
9 KOG1014 17 beta-hydroxysteroid 99.3 2.9E-11 6.3E-16 117.9 13.1 147 12-168 51-207 (312)
10 KOG1205 Predicted dehydrogenas 99.3 1.4E-11 3E-16 120.4 9.1 147 9-166 11-168 (282)
11 CHL00194 ycf39 Ycf39; Provisio 99.2 1.1E-10 2.5E-15 116.9 13.0 98 11-122 1-110 (317)
12 PF13460 NAD_binding_10: NADH( 99.2 1.7E-10 3.6E-15 105.9 10.8 73 13-101 1-73 (183)
13 PRK06194 hypothetical protein; 99.2 1.4E-10 3.1E-15 114.0 10.7 115 10-137 6-132 (287)
14 PRK06139 short chain dehydroge 99.2 1.1E-10 2.4E-15 118.0 10.1 82 10-99 7-95 (330)
15 KOG1201 Hydroxysteroid 17-beta 99.1 2.9E-10 6.2E-15 110.6 11.6 132 10-155 38-181 (300)
16 PLN02427 UDP-apiose/xylose syn 99.1 3.6E-10 7.8E-15 116.4 12.6 89 5-99 9-97 (386)
17 PRK08340 glucose-1-dehydrogena 99.1 3E-10 6.4E-15 110.2 11.1 80 11-99 1-87 (259)
18 COG3967 DltE Short-chain dehyd 99.1 2.1E-10 4.5E-15 105.5 9.2 129 11-155 6-145 (245)
19 PRK05876 short chain dehydroge 99.1 2E-10 4.3E-15 113.0 9.5 82 10-99 6-94 (275)
20 PRK05867 short chain dehydroge 99.1 3.3E-10 7.2E-15 109.4 10.9 83 10-100 9-98 (253)
21 PRK08339 short chain dehydroge 99.1 2.4E-10 5.2E-15 111.5 9.7 82 11-99 9-96 (263)
22 PRK07109 short chain dehydroge 99.1 3.3E-10 7.3E-15 114.6 10.4 82 10-99 8-96 (334)
23 PRK07024 short chain dehydroge 99.1 3E-10 6.5E-15 110.1 9.3 81 11-100 3-90 (257)
24 PRK13394 3-hydroxybutyrate deh 99.1 5.9E-10 1.3E-14 107.7 10.7 82 10-99 7-95 (262)
25 PLN02214 cinnamoyl-CoA reducta 99.1 1.3E-09 2.9E-14 110.6 13.4 84 9-100 9-93 (342)
26 PLN03209 translocon at the inn 99.1 1.4E-09 3E-14 115.8 13.7 107 9-122 79-208 (576)
27 PRK07825 short chain dehydroge 99.1 4E-10 8.6E-15 110.1 9.0 77 11-99 6-89 (273)
28 PRK07063 short chain dehydroge 99.1 6.8E-10 1.5E-14 107.6 10.4 83 10-99 7-97 (260)
29 PRK07814 short chain dehydroge 99.1 1.4E-09 3E-14 105.9 12.4 82 10-99 10-98 (263)
30 PRK05717 oxidoreductase; Valid 99.1 7.4E-10 1.6E-14 107.1 10.2 89 1-100 1-96 (255)
31 PRK08267 short chain dehydroge 99.1 4.4E-10 9.5E-15 108.9 8.4 79 12-100 3-89 (260)
32 PRK06182 short chain dehydroge 99.1 8.9E-10 1.9E-14 107.7 10.6 76 11-100 4-86 (273)
33 PRK05872 short chain dehydroge 99.0 1.3E-09 2.8E-14 108.2 11.8 82 10-100 9-97 (296)
34 PRK07067 sorbitol dehydrogenas 99.0 1.2E-09 2.5E-14 105.8 11.1 79 10-99 6-91 (257)
35 PRK06179 short chain dehydroge 99.0 3.9E-10 8.4E-15 109.9 7.7 75 10-100 4-85 (270)
36 PF01073 3Beta_HSD: 3-beta hyd 99.0 8.7E-10 1.9E-14 108.9 10.2 79 14-102 1-80 (280)
37 PRK05599 hypothetical protein; 99.0 6.3E-10 1.4E-14 107.4 8.9 82 11-100 1-89 (246)
38 PRK06180 short chain dehydroge 99.0 7.2E-10 1.6E-14 108.8 9.4 78 11-99 5-89 (277)
39 PRK08251 short chain dehydroge 99.0 7.3E-10 1.6E-14 106.4 9.2 82 11-99 3-92 (248)
40 PRK07478 short chain dehydroge 99.0 8.5E-10 1.9E-14 106.5 9.7 82 10-99 6-94 (254)
41 PRK08643 acetoin reductase; Va 99.0 8.4E-10 1.8E-14 106.6 9.5 81 11-99 3-90 (256)
42 PRK07454 short chain dehydroge 99.0 1.2E-09 2.6E-14 104.6 10.5 82 11-100 7-95 (241)
43 PRK08265 short chain dehydroge 99.0 1E-09 2.2E-14 106.8 10.1 79 10-99 6-91 (261)
44 PLN02896 cinnamyl-alcohol dehy 99.0 2.9E-09 6.3E-14 108.3 13.8 90 1-99 1-90 (353)
45 PRK05650 short chain dehydroge 99.0 8.9E-10 1.9E-14 107.6 9.7 81 12-100 2-89 (270)
46 PRK05866 short chain dehydroge 99.0 8.3E-10 1.8E-14 109.6 9.6 82 11-100 41-129 (293)
47 PRK07523 gluconate 5-dehydroge 99.0 9.8E-10 2.1E-14 106.1 9.8 84 9-100 9-99 (255)
48 PRK12429 3-hydroxybutyrate deh 99.0 1.6E-09 3.5E-14 104.3 11.3 82 11-100 5-93 (258)
49 PRK06482 short chain dehydroge 99.0 7.5E-10 1.6E-14 108.3 9.0 79 11-100 3-88 (276)
50 PRK05993 short chain dehydroge 99.0 7.2E-10 1.6E-14 108.9 8.7 75 11-99 5-87 (277)
51 PLN02253 xanthoxin dehydrogena 99.0 8.7E-10 1.9E-14 108.1 9.3 81 10-99 18-105 (280)
52 PRK05854 short chain dehydroge 99.0 1.2E-09 2.7E-14 109.4 10.6 84 10-100 14-105 (313)
53 PRK05855 short chain dehydroge 99.0 9E-10 2E-14 118.5 10.2 84 9-100 314-404 (582)
54 PLN02662 cinnamyl-alcohol dehy 99.0 2.4E-09 5.2E-14 107.0 12.3 84 10-100 4-88 (322)
55 PRK07775 short chain dehydroge 99.0 1.4E-09 3E-14 106.6 10.2 90 2-99 2-98 (274)
56 PRK07453 protochlorophyllide o 99.0 1E-09 2.2E-14 110.2 9.4 82 10-99 6-94 (322)
57 PRK06124 gluconate 5-dehydroge 99.0 1.5E-09 3.3E-14 104.8 10.3 83 9-99 10-99 (256)
58 PRK07904 short chain dehydroge 99.0 1E-09 2.2E-14 106.5 9.1 86 9-100 7-99 (253)
59 PRK06172 short chain dehydroge 99.0 9.9E-10 2.1E-14 105.9 8.9 82 10-99 7-95 (253)
60 PRK07062 short chain dehydroge 99.0 9.9E-10 2.1E-14 106.8 8.9 83 10-99 8-98 (265)
61 PLN02986 cinnamyl-alcohol dehy 99.0 3.2E-09 7E-14 106.4 12.8 83 10-99 5-88 (322)
62 PRK06200 2,3-dihydroxy-2,3-dih 99.0 3.2E-09 7E-14 103.1 12.2 79 10-99 6-91 (263)
63 TIGR01472 gmd GDP-mannose 4,6- 99.0 3.2E-09 6.9E-14 107.5 12.4 81 12-99 2-89 (343)
64 PRK06949 short chain dehydroge 99.0 3.3E-09 7.1E-14 102.4 11.9 82 10-99 9-97 (258)
65 PRK12481 2-deoxy-D-gluconate 3 99.0 3.5E-09 7.5E-14 102.5 12.0 112 10-134 8-129 (251)
66 PRK12826 3-ketoacyl-(acyl-carr 99.0 2E-09 4.4E-14 103.1 10.2 83 10-100 6-95 (251)
67 PRK09291 short chain dehydroge 99.0 2E-09 4.2E-14 103.9 10.0 80 12-99 4-84 (257)
68 PRK08263 short chain dehydroge 99.0 1.2E-09 2.6E-14 107.0 8.7 79 11-100 4-89 (275)
69 PRK05884 short chain dehydroge 99.0 2.3E-09 5.1E-14 102.0 10.3 76 11-99 1-80 (223)
70 PRK07326 short chain dehydroge 99.0 4.3E-09 9.3E-14 100.2 12.2 81 11-100 7-94 (237)
71 PRK07097 gluconate 5-dehydroge 99.0 2.7E-09 5.7E-14 103.9 10.9 83 10-100 10-99 (265)
72 PLN02650 dihydroflavonol-4-red 99.0 4.6E-09 1E-13 106.7 13.1 83 10-99 5-88 (351)
73 PRK10538 malonic semialdehyde 99.0 7.5E-09 1.6E-13 99.7 13.8 78 11-99 1-85 (248)
74 PLN02657 3,8-divinyl protochlo 99.0 5E-09 1.1E-13 108.3 13.3 107 8-122 58-182 (390)
75 PRK06935 2-deoxy-D-gluconate 3 99.0 2E-09 4.3E-14 104.3 9.6 81 10-99 15-102 (258)
76 PRK15181 Vi polysaccharide bio 99.0 4.2E-09 9.1E-14 107.1 12.4 82 10-98 15-100 (348)
77 PRK08063 enoyl-(acyl carrier p 99.0 1.6E-09 3.4E-14 104.1 8.8 81 11-99 5-93 (250)
78 PRK12828 short chain dehydroge 99.0 4.2E-09 9.1E-14 100.0 11.5 80 10-99 7-93 (239)
79 PRK07231 fabG 3-ketoacyl-(acyl 99.0 3.2E-09 6.9E-14 101.8 10.8 81 10-99 5-92 (251)
80 TIGR02415 23BDH acetoin reduct 99.0 1.5E-09 3.3E-14 104.5 8.5 80 12-99 2-88 (254)
81 PRK07060 short chain dehydroge 99.0 3.7E-09 8E-14 101.1 11.1 78 10-100 9-89 (245)
82 PRK08085 gluconate 5-dehydroge 99.0 2.4E-09 5.2E-14 103.4 9.9 82 10-99 9-97 (254)
83 PRK06138 short chain dehydroge 99.0 3.1E-09 6.8E-14 102.0 10.6 81 10-99 5-92 (252)
84 PRK09186 flagellin modificatio 99.0 6.2E-09 1.3E-13 100.3 12.7 83 10-99 4-94 (256)
85 PRK06057 short chain dehydroge 99.0 2.3E-09 5E-14 103.6 9.7 77 10-99 7-90 (255)
86 TIGR03325 BphB_TodD cis-2,3-di 99.0 4E-09 8.8E-14 102.4 11.4 112 10-134 5-130 (262)
87 PRK07666 fabG 3-ketoacyl-(acyl 99.0 2.1E-09 4.5E-14 102.8 9.2 83 10-100 7-96 (239)
88 TIGR03589 PseB UDP-N-acetylglu 99.0 7.9E-09 1.7E-13 104.1 13.8 82 10-99 4-85 (324)
89 PF00106 adh_short: short chai 99.0 1.8E-09 3.8E-14 97.3 8.1 82 12-100 2-92 (167)
90 PRK06101 short chain dehydroge 99.0 1.9E-09 4.2E-14 103.4 8.9 76 12-99 3-82 (240)
91 PRK08589 short chain dehydroge 99.0 4E-09 8.7E-14 103.3 11.2 81 10-99 6-93 (272)
92 PRK07791 short chain dehydroge 99.0 3.8E-09 8.2E-14 104.5 11.1 83 10-100 6-104 (286)
93 PRK12939 short chain dehydroge 99.0 3.5E-09 7.5E-14 101.5 10.4 83 10-100 7-96 (250)
94 PRK06114 short chain dehydroge 99.0 3.1E-09 6.8E-14 102.7 10.2 83 10-100 8-98 (254)
95 PRK09134 short chain dehydroge 99.0 2.4E-09 5.3E-14 103.7 9.3 83 10-100 9-99 (258)
96 PRK07677 short chain dehydroge 98.9 2E-09 4.3E-14 103.9 8.5 81 11-99 2-89 (252)
97 PRK08277 D-mannonate oxidoredu 98.9 8.5E-09 1.8E-13 101.0 13.0 82 10-99 10-98 (278)
98 PRK07832 short chain dehydroge 98.9 2.3E-09 5E-14 104.9 8.9 81 12-99 2-89 (272)
99 PRK07102 short chain dehydroge 98.9 1.7E-09 3.8E-14 103.7 7.8 82 11-99 2-87 (243)
100 PRK07424 bifunctional sterol d 98.9 1.1E-08 2.3E-13 106.0 14.2 80 9-99 177-256 (406)
101 PRK06500 short chain dehydroge 98.9 5.8E-09 1.3E-13 100.0 11.4 78 11-99 7-91 (249)
102 PRK06181 short chain dehydroge 98.9 5.7E-09 1.2E-13 101.2 11.4 82 11-100 2-90 (263)
103 PRK09072 short chain dehydroge 98.9 2.9E-09 6.3E-14 103.5 9.2 81 10-99 5-91 (263)
104 PRK05875 short chain dehydroge 98.9 1.2E-08 2.6E-13 99.7 13.6 83 10-99 7-97 (276)
105 PRK07890 short chain dehydroge 98.9 2.9E-09 6.3E-14 102.8 9.1 82 10-99 5-93 (258)
106 PRK11908 NAD-dependent epimera 98.9 5.6E-09 1.2E-13 105.9 11.5 76 11-98 2-78 (347)
107 KOG1208 Dehydrogenases with di 98.9 4.8E-09 1E-13 105.0 10.7 128 10-150 35-173 (314)
108 PRK06463 fabG 3-ketoacyl-(acyl 98.9 5.1E-09 1.1E-13 101.2 10.4 76 10-99 7-90 (255)
109 PRK05653 fabG 3-ketoacyl-(acyl 98.9 4.3E-09 9.2E-14 100.3 9.6 82 11-100 6-94 (246)
110 PF02719 Polysacc_synt_2: Poly 98.9 2.4E-09 5.2E-14 105.2 8.0 79 13-97 1-86 (293)
111 PLN02989 cinnamyl-alcohol dehy 98.9 1.1E-08 2.4E-13 102.6 12.9 83 10-99 5-88 (325)
112 PRK09135 pteridine reductase; 98.9 9.7E-09 2.1E-13 98.2 11.9 83 10-99 6-96 (249)
113 PRK06198 short chain dehydroge 98.9 6.5E-09 1.4E-13 100.5 10.7 82 10-99 6-95 (260)
114 PLN00198 anthocyanidin reducta 98.9 1.4E-08 3E-13 102.6 13.4 81 10-99 9-91 (338)
115 PRK12746 short chain dehydroge 98.9 5.5E-09 1.2E-13 100.7 10.0 82 10-99 6-101 (254)
116 PRK12829 short chain dehydroge 98.9 4.7E-09 1E-13 101.5 9.6 81 9-99 10-97 (264)
117 TIGR03206 benzo_BadH 2-hydroxy 98.9 4.5E-09 9.8E-14 100.8 9.4 81 11-99 4-91 (250)
118 PLN02780 ketoreductase/ oxidor 98.9 2.8E-09 6.1E-14 107.3 8.2 83 10-99 53-143 (320)
119 PRK07774 short chain dehydroge 98.9 1.2E-08 2.6E-13 97.9 12.3 82 10-99 6-94 (250)
120 PRK12743 oxidoreductase; Provi 98.9 6.2E-09 1.4E-13 100.8 10.2 82 11-100 3-92 (256)
121 PRK12384 sorbitol-6-phosphate 98.9 4.4E-09 9.6E-14 101.7 9.1 82 11-99 3-92 (259)
122 PRK06125 short chain dehydroge 98.9 6E-09 1.3E-13 101.0 10.1 83 10-99 7-92 (259)
123 PRK06079 enoyl-(acyl carrier p 98.9 9.2E-09 2E-13 99.6 11.3 79 10-99 7-94 (252)
124 PRK08416 7-alpha-hydroxysteroi 98.9 5.2E-09 1.1E-13 101.6 9.5 83 10-99 8-98 (260)
125 PRK12936 3-ketoacyl-(acyl-carr 98.9 6.5E-09 1.4E-13 99.3 9.9 79 10-99 6-91 (245)
126 PRK07576 short chain dehydroge 98.9 5.1E-09 1.1E-13 102.1 9.2 82 10-99 9-97 (264)
127 PRK06197 short chain dehydroge 98.9 5.1E-09 1.1E-13 104.3 9.3 84 9-99 15-106 (306)
128 KOG0725 Reductases with broad 98.9 1.6E-08 3.5E-13 99.3 12.6 114 9-130 7-132 (270)
129 PRK08213 gluconate 5-dehydroge 98.9 7E-09 1.5E-13 100.4 9.8 82 10-99 12-100 (259)
130 PRK07069 short chain dehydroge 98.9 5.8E-09 1.3E-13 100.1 9.0 82 12-100 1-91 (251)
131 PRK09242 tropinone reductase; 98.9 8.1E-09 1.7E-13 99.9 10.0 83 10-99 9-99 (257)
132 TIGR01832 kduD 2-deoxy-D-gluco 98.9 7.6E-09 1.7E-13 99.3 9.8 80 10-100 5-92 (248)
133 PRK07856 short chain dehydroge 98.9 6.2E-09 1.4E-13 100.4 9.1 74 10-99 6-86 (252)
134 TIGR01500 sepiapter_red sepiap 98.9 6.4E-09 1.4E-13 100.8 9.2 81 12-99 2-98 (256)
135 PRK08219 short chain dehydroge 98.9 8.4E-09 1.8E-13 97.3 9.7 77 11-100 4-83 (227)
136 PRK08703 short chain dehydroge 98.9 2.3E-08 5E-13 95.6 12.8 83 10-99 6-98 (239)
137 PRK12367 short chain dehydroge 98.9 2.6E-08 5.7E-13 96.4 13.2 106 11-134 15-122 (245)
138 PRK08862 short chain dehydroge 98.9 8E-09 1.7E-13 98.8 9.4 81 10-98 5-93 (227)
139 KOG2865 NADH:ubiquinone oxidor 98.9 5.9E-09 1.3E-13 100.2 8.3 102 11-121 62-176 (391)
140 PRK08278 short chain dehydroge 98.9 8E-09 1.7E-13 101.3 9.5 81 11-99 7-101 (273)
141 PRK06947 glucose-1-dehydrogena 98.9 1.1E-08 2.4E-13 98.1 10.4 81 11-99 3-91 (248)
142 PRK08936 glucose-1-dehydrogena 98.9 1.1E-08 2.4E-13 99.2 10.3 82 10-99 7-96 (261)
143 PF05368 NmrA: NmrA-like famil 98.9 2E-08 4.3E-13 96.0 11.8 92 13-118 1-99 (233)
144 PRK06914 short chain dehydroge 98.9 8.1E-09 1.8E-13 101.2 9.2 82 11-100 4-93 (280)
145 TIGR03649 ergot_EASG ergot alk 98.9 1E-08 2.2E-13 101.0 9.8 94 12-122 1-105 (285)
146 TIGR03466 HpnA hopanoid-associ 98.9 1.2E-08 2.5E-13 101.9 10.3 75 11-99 1-75 (328)
147 PRK12747 short chain dehydroge 98.9 1.1E-08 2.5E-13 98.5 9.9 82 10-99 4-99 (252)
148 PLN00141 Tic62-NAD(P)-related 98.9 4E-08 8.6E-13 95.1 13.6 80 8-99 15-96 (251)
149 PRK07074 short chain dehydroge 98.8 1.5E-08 3.3E-13 97.9 10.6 79 11-99 3-88 (257)
150 PRK06483 dihydromonapterin red 98.8 8.3E-09 1.8E-13 98.5 8.6 76 11-99 3-85 (236)
151 PRK05693 short chain dehydroge 98.8 1.2E-08 2.5E-13 99.9 9.8 74 12-99 3-83 (274)
152 PRK05565 fabG 3-ketoacyl-(acyl 98.8 9.5E-09 2.1E-13 98.2 8.9 81 11-99 6-94 (247)
153 PRK12745 3-ketoacyl-(acyl-carr 98.8 1.3E-08 2.7E-13 98.2 9.7 81 11-99 3-91 (256)
154 PRK12827 short chain dehydroge 98.8 1.6E-08 3.4E-13 96.8 10.3 83 10-100 6-99 (249)
155 COG1086 Predicted nucleoside-d 98.8 2.4E-08 5.2E-13 104.6 12.2 108 9-122 249-376 (588)
156 PRK07035 short chain dehydroge 98.8 3.1E-08 6.8E-13 95.4 12.3 81 10-98 8-95 (252)
157 PRK08628 short chain dehydroge 98.8 1.1E-08 2.5E-13 98.8 9.2 81 10-99 7-94 (258)
158 PLN02695 GDP-D-mannose-3',5'-e 98.8 2E-08 4.4E-13 103.1 11.5 79 7-99 18-96 (370)
159 PRK08125 bifunctional UDP-gluc 98.8 1.5E-08 3.2E-13 111.8 11.3 79 9-99 314-393 (660)
160 PRK08226 short chain dehydroge 98.8 1.1E-08 2.5E-13 99.1 9.2 81 10-99 6-93 (263)
161 PRK06484 short chain dehydroge 98.8 1.1E-08 2.3E-13 109.4 9.8 78 10-98 5-89 (520)
162 PRK08177 short chain dehydroge 98.8 2.9E-08 6.3E-13 94.2 11.7 77 11-100 2-83 (225)
163 PRK08415 enoyl-(acyl carrier p 98.8 2.5E-08 5.3E-13 98.2 11.5 78 10-99 5-94 (274)
164 PRK07792 fabG 3-ketoacyl-(acyl 98.8 2E-08 4.4E-13 100.3 11.0 83 10-100 12-101 (306)
165 PRK07984 enoyl-(acyl carrier p 98.8 3E-08 6.5E-13 96.9 12.1 81 10-99 6-95 (262)
166 PRK06196 oxidoreductase; Provi 98.8 2.1E-08 4.5E-13 100.4 11.1 78 10-99 26-110 (315)
167 PRK06841 short chain dehydroge 98.8 1.5E-08 3.2E-13 97.8 9.6 80 10-100 15-101 (255)
168 PRK06484 short chain dehydroge 98.8 1.7E-08 3.6E-13 107.9 11.0 79 10-99 269-354 (520)
169 PRK06113 7-alpha-hydroxysteroi 98.8 1.4E-08 3.1E-13 98.1 9.5 82 10-99 11-99 (255)
170 PRK07806 short chain dehydroge 98.8 3.3E-08 7.2E-13 94.9 11.9 82 10-99 6-95 (248)
171 PRK12937 short chain dehydroge 98.8 2.6E-08 5.7E-13 95.2 11.0 82 10-99 5-94 (245)
172 PRK06398 aldose dehydrogenase; 98.8 8.8E-09 1.9E-13 100.1 7.8 71 10-99 6-83 (258)
173 PRK08217 fabG 3-ketoacyl-(acyl 98.8 1.7E-08 3.8E-13 96.7 9.8 82 10-99 5-93 (253)
174 PLN02583 cinnamoyl-CoA reducta 98.8 6E-08 1.3E-12 96.4 13.8 82 10-99 6-89 (297)
175 KOG4169 15-hydroxyprostaglandi 98.8 2.4E-08 5.3E-13 93.4 10.1 140 10-166 5-155 (261)
176 TIGR01963 PHB_DH 3-hydroxybuty 98.8 1.3E-08 2.9E-13 97.7 8.8 80 12-99 3-89 (255)
177 PRK08309 short chain dehydroge 98.8 6.2E-08 1.3E-12 89.3 12.7 103 11-125 1-115 (177)
178 PLN02686 cinnamoyl-CoA reducta 98.8 4E-08 8.6E-13 100.8 12.6 83 9-99 52-139 (367)
179 PRK07533 enoyl-(acyl carrier p 98.8 3.9E-08 8.4E-13 95.6 11.9 86 1-99 2-99 (258)
180 PRK12823 benD 1,6-dihydroxycyc 98.8 3.4E-08 7.4E-13 95.6 11.4 80 10-98 8-94 (260)
181 PRK06523 short chain dehydroge 98.8 9.6E-09 2.1E-13 99.4 7.1 73 10-99 9-88 (260)
182 PRK06924 short chain dehydroge 98.8 2.2E-08 4.7E-13 96.3 9.5 77 12-99 3-91 (251)
183 PRK12938 acetyacetyl-CoA reduc 98.8 3.1E-08 6.7E-13 95.0 10.5 82 11-100 4-93 (246)
184 PRK12935 acetoacetyl-CoA reduc 98.8 2.1E-08 4.5E-13 96.2 9.3 83 10-100 6-96 (247)
185 PRK05557 fabG 3-ketoacyl-(acyl 98.8 2.9E-08 6.3E-13 94.6 10.3 83 10-100 5-95 (248)
186 TIGR02622 CDP_4_6_dhtase CDP-g 98.8 4.6E-08 1E-12 99.3 12.2 79 11-98 5-85 (349)
187 PRK08264 short chain dehydroge 98.8 2E-08 4.3E-13 95.8 9.0 74 10-98 6-83 (238)
188 PRK08159 enoyl-(acyl carrier p 98.8 6.9E-08 1.5E-12 94.8 13.0 78 10-99 10-99 (272)
189 PRK07831 short chain dehydroge 98.8 2.1E-08 4.6E-13 97.3 9.3 83 10-99 17-108 (262)
190 PRK07041 short chain dehydroge 98.8 2E-08 4.3E-13 95.3 8.8 77 14-99 1-80 (230)
191 TIGR01289 LPOR light-dependent 98.8 3E-08 6.5E-13 99.4 10.4 118 11-135 4-129 (314)
192 PRK08993 2-deoxy-D-gluconate 3 98.8 2.7E-08 5.9E-13 96.2 9.8 80 10-99 10-96 (253)
193 PLN02653 GDP-mannose 4,6-dehyd 98.8 3.9E-08 8.5E-13 99.3 11.2 82 10-99 6-94 (340)
194 PRK08642 fabG 3-ketoacyl-(acyl 98.8 9.8E-08 2.1E-12 91.7 13.3 78 10-98 5-91 (253)
195 PF01370 Epimerase: NAD depend 98.8 3.3E-08 7.2E-13 93.7 9.9 74 13-99 1-76 (236)
196 PRK10675 UDP-galactose-4-epime 98.8 6.1E-08 1.3E-12 97.6 12.3 79 11-99 1-84 (338)
197 PRK12742 oxidoreductase; Provi 98.8 4.3E-08 9.3E-13 93.3 10.6 77 10-99 6-86 (237)
198 PRK07201 short chain dehydroge 98.8 2.3E-08 5E-13 109.9 9.9 82 10-99 371-459 (657)
199 TIGR02632 RhaD_aldol-ADH rhamn 98.8 2.5E-08 5.5E-13 110.0 10.1 84 10-100 414-505 (676)
200 PRK07370 enoyl-(acyl carrier p 98.8 7.2E-08 1.6E-12 93.8 12.3 116 11-134 7-137 (258)
201 PRK06505 enoyl-(acyl carrier p 98.8 5.3E-08 1.2E-12 95.5 11.4 77 11-99 8-96 (271)
202 KOG1200 Mitochondrial/plastidi 98.8 5.2E-08 1.1E-12 89.1 10.2 127 10-148 14-149 (256)
203 PRK12744 short chain dehydroge 98.8 3.5E-08 7.6E-13 95.5 9.9 82 10-99 8-100 (257)
204 PRK06940 short chain dehydroge 98.8 8.4E-08 1.8E-12 94.2 12.6 106 12-134 4-115 (275)
205 PRK08690 enoyl-(acyl carrier p 98.8 5.5E-08 1.2E-12 94.7 11.1 82 10-100 6-96 (261)
206 PRK07023 short chain dehydroge 98.7 3.5E-08 7.7E-13 94.6 9.5 77 11-100 2-89 (243)
207 PRK06720 hypothetical protein; 98.7 8.5E-08 1.9E-12 87.7 11.5 112 10-131 16-134 (169)
208 PRK12825 fabG 3-ketoacyl-(acyl 98.7 3.7E-08 8.1E-13 93.8 9.5 81 11-99 7-95 (249)
209 PLN02572 UDP-sulfoquinovose sy 98.7 1.1E-07 2.3E-12 100.1 13.6 79 9-98 46-146 (442)
210 KOG0172 Lysine-ketoglutarate r 98.7 5.1E-08 1.1E-12 97.5 10.4 154 11-185 3-157 (445)
211 PRK08303 short chain dehydroge 98.7 4.4E-08 9.5E-13 98.0 10.2 81 10-98 8-106 (305)
212 TIGR01831 fabG_rel 3-oxoacyl-( 98.7 2.6E-08 5.6E-13 95.1 8.1 80 13-100 1-88 (239)
213 PRK09730 putative NAD(P)-bindi 98.7 3.1E-08 6.6E-13 94.7 8.6 80 12-99 3-90 (247)
214 PRK08324 short chain dehydroge 98.7 6E-08 1.3E-12 107.3 12.1 81 11-100 423-510 (681)
215 PRK06123 short chain dehydroge 98.7 4E-08 8.7E-13 94.2 9.4 81 12-100 4-92 (248)
216 PLN02166 dTDP-glucose 4,6-dehy 98.7 5E-08 1.1E-12 102.4 10.8 76 9-98 119-194 (436)
217 TIGR01829 AcAcCoA_reduct aceto 98.7 3.9E-08 8.4E-13 93.8 9.1 80 12-99 2-89 (242)
218 PLN02240 UDP-glucose 4-epimera 98.7 1E-07 2.2E-12 96.5 12.6 82 10-99 5-92 (352)
219 COG1087 GalE UDP-glucose 4-epi 98.7 8.5E-08 1.8E-12 93.5 11.3 75 11-98 1-77 (329)
220 PRK08594 enoyl-(acyl carrier p 98.7 6.7E-08 1.4E-12 94.0 10.4 80 10-99 7-98 (257)
221 PRK09987 dTDP-4-dehydrorhamnos 98.7 4.7E-08 1E-12 97.3 9.5 63 11-99 1-65 (299)
222 TIGR01181 dTDP_gluc_dehyt dTDP 98.7 7.5E-08 1.6E-12 95.3 10.9 81 12-100 1-85 (317)
223 PRK07889 enoyl-(acyl carrier p 98.7 6.2E-08 1.4E-12 94.1 9.9 79 10-99 7-96 (256)
224 PRK07985 oxidoreductase; Provi 98.7 1.1E-07 2.3E-12 94.5 11.6 81 11-99 50-139 (294)
225 PRK08017 oxidoreductase; Provi 98.7 5.5E-08 1.2E-12 93.7 9.3 74 12-99 4-85 (256)
226 PRK06171 sorbitol-6-phosphate 98.7 1.2E-07 2.6E-12 92.1 11.7 73 10-99 9-88 (266)
227 PRK12320 hypothetical protein; 98.7 8.3E-08 1.8E-12 105.1 11.5 95 11-123 1-103 (699)
228 PRK06997 enoyl-(acyl carrier p 98.7 1.1E-07 2.3E-12 92.7 10.9 78 10-99 6-95 (260)
229 PLN02206 UDP-glucuronate decar 98.7 8.5E-08 1.8E-12 100.8 10.8 76 9-99 118-194 (442)
230 PRK12824 acetoacetyl-CoA reduc 98.7 6.6E-08 1.4E-12 92.3 9.2 80 12-99 4-91 (245)
231 PRK06603 enoyl-(acyl carrier p 98.7 1.8E-07 4E-12 91.0 12.4 80 11-99 9-97 (260)
232 cd01078 NAD_bind_H4MPT_DH NADP 98.7 7.3E-08 1.6E-12 89.9 9.1 112 9-130 27-138 (194)
233 PRK06128 oxidoreductase; Provi 98.7 5E-08 1.1E-12 97.0 8.4 81 11-99 56-145 (300)
234 PRK08945 putative oxoacyl-(acy 98.7 2.6E-07 5.7E-12 88.7 12.9 84 9-99 11-103 (247)
235 TIGR02685 pter_reduc_Leis pter 98.7 5.6E-08 1.2E-12 94.8 8.3 83 11-100 2-96 (267)
236 PRK07577 short chain dehydroge 98.7 1E-07 2.2E-12 90.5 10.0 71 11-100 4-80 (234)
237 PRK10217 dTDP-glucose 4,6-dehy 98.7 9.7E-08 2.1E-12 96.9 10.3 80 11-100 2-86 (355)
238 PRK06701 short chain dehydroge 98.7 1.6E-07 3.4E-12 93.2 11.0 82 10-99 46-135 (290)
239 PRK08220 2,3-dihydroxybenzoate 98.6 8E-08 1.7E-12 92.3 8.6 74 10-100 8-88 (252)
240 PRK12859 3-ketoacyl-(acyl-carr 98.6 1.5E-07 3.1E-12 91.3 10.3 82 10-99 6-107 (256)
241 PRK12748 3-ketoacyl-(acyl-carr 98.6 8.2E-08 1.8E-12 92.8 8.5 81 11-99 6-106 (256)
242 PLN00015 protochlorophyllide r 98.6 7E-08 1.5E-12 96.5 8.2 79 14-99 1-86 (308)
243 PRK06077 fabG 3-ketoacyl-(acyl 98.6 2E-07 4.3E-12 89.5 10.9 81 10-98 6-94 (252)
244 TIGR01179 galE UDP-glucose-4-e 98.6 2.1E-07 4.5E-12 92.5 11.4 79 12-99 1-81 (328)
245 TIGR01830 3oxo_ACP_reduc 3-oxo 98.6 1.2E-07 2.5E-12 90.2 8.9 79 13-99 1-87 (239)
246 PLN02260 probable rhamnose bio 98.6 2.3E-07 5.1E-12 102.4 12.6 105 10-122 6-132 (668)
247 PRK05865 hypothetical protein; 98.6 2.2E-07 4.8E-12 103.8 12.3 97 11-124 1-105 (854)
248 PRK07201 short chain dehydroge 98.6 2.3E-07 5E-12 102.0 12.1 100 11-121 1-124 (657)
249 KOG1611 Predicted short chain- 98.6 8.6E-07 1.9E-11 83.2 13.8 118 11-140 4-137 (249)
250 PLN00016 RNA-binding protein; 98.6 8.9E-08 1.9E-12 98.5 7.9 101 9-122 51-165 (378)
251 KOG1209 1-Acyl dihydroxyaceton 98.6 3.5E-07 7.6E-12 84.9 10.8 138 7-166 4-157 (289)
252 PRK05786 fabG 3-ketoacyl-(acyl 98.6 2.4E-07 5.3E-12 88.2 9.5 81 11-100 6-93 (238)
253 TIGR01214 rmlD dTDP-4-dehydror 98.6 2.6E-07 5.6E-12 90.8 9.4 59 12-99 1-61 (287)
254 PRK10084 dTDP-glucose 4,6 dehy 98.5 4.4E-07 9.6E-12 92.0 11.2 80 11-99 1-84 (352)
255 TIGR01746 Thioester-redct thio 98.5 7.4E-07 1.6E-11 89.9 12.4 84 12-100 1-100 (367)
256 PRK08261 fabG 3-ketoacyl-(acyl 98.5 5.3E-07 1.2E-11 94.8 11.3 78 10-100 210-296 (450)
257 PF07993 NAD_binding_4: Male s 98.5 4.6E-07 1E-11 87.8 9.9 83 15-102 1-101 (249)
258 PF04321 RmlD_sub_bind: RmlD s 98.5 1.4E-07 3.1E-12 93.5 6.0 87 11-126 1-105 (286)
259 COG1088 RfbB dTDP-D-glucose 4, 98.5 1.2E-06 2.7E-11 85.2 11.9 104 11-122 1-126 (340)
260 TIGR02197 heptose_epim ADP-L-g 98.5 6.9E-07 1.5E-11 88.7 10.6 73 13-99 1-77 (314)
261 PRK11150 rfaD ADP-L-glycero-D- 98.5 4.5E-07 9.8E-12 90.2 9.1 68 13-98 2-78 (308)
262 PRK06953 short chain dehydroge 98.5 5.8E-07 1.3E-11 85.1 9.3 74 12-99 3-81 (222)
263 PRK12548 shikimate 5-dehydroge 98.5 5.8E-07 1.3E-11 89.3 9.7 138 10-167 126-270 (289)
264 COG0451 WcaG Nucleoside-diphos 98.5 4.9E-07 1.1E-11 89.4 9.2 75 12-101 2-77 (314)
265 COG2910 Putative NADH-flavin r 98.5 9.2E-07 2E-11 80.4 9.8 74 11-100 1-74 (211)
266 COG0702 Predicted nucleoside-d 98.5 7.1E-07 1.5E-11 86.6 9.9 74 11-99 1-74 (275)
267 KOG1430 C-3 sterol dehydrogena 98.5 8.2E-07 1.8E-11 89.9 10.3 107 8-121 2-125 (361)
268 KOG1371 UDP-glucose 4-epimeras 98.5 1.3E-06 2.8E-11 86.1 11.3 78 11-97 3-86 (343)
269 PLN02730 enoyl-[acyl-carrier-p 98.5 3.5E-07 7.5E-12 91.5 7.5 81 10-98 9-130 (303)
270 PRK06550 fabG 3-ketoacyl-(acyl 98.4 7.1E-07 1.5E-11 84.9 9.0 72 11-99 6-78 (235)
271 COG1028 FabG Dehydrogenases wi 98.4 1.4E-06 3.1E-11 83.7 10.1 84 9-100 4-98 (251)
272 PRK07578 short chain dehydroge 98.4 1.1E-06 2.5E-11 81.6 8.6 62 12-99 2-66 (199)
273 KOG1610 Corticosteroid 11-beta 98.4 4.8E-06 1E-10 81.8 13.0 138 9-163 28-180 (322)
274 PLN02996 fatty acyl-CoA reduct 98.4 3.1E-06 6.6E-11 90.2 12.5 87 10-100 11-124 (491)
275 PLN02778 3,5-epimerase/4-reduc 98.4 2.9E-06 6.2E-11 84.6 11.3 58 10-99 9-68 (298)
276 PRK09009 C factor cell-cell si 98.4 6.7E-07 1.5E-11 85.1 6.5 76 11-100 1-79 (235)
277 PLN02503 fatty acyl-CoA reduct 98.3 5.5E-06 1.2E-10 89.8 12.9 88 9-100 118-231 (605)
278 smart00822 PKS_KR This enzymat 98.3 9.7E-07 2.1E-11 78.9 6.0 81 12-99 2-92 (180)
279 COG1091 RfbD dTDP-4-dehydrorha 98.3 1.6E-06 3.5E-11 84.9 7.9 86 11-126 1-104 (281)
280 TIGR01777 yfcH conserved hypot 98.3 1.9E-06 4.1E-11 84.4 8.4 69 13-100 1-69 (292)
281 PF13561 adh_short_C2: Enoyl-( 98.3 7.6E-07 1.6E-11 85.4 5.3 76 17-101 1-86 (241)
282 PRK00048 dihydrodipicolinate r 98.3 4E-06 8.7E-11 81.9 9.9 163 11-204 2-167 (257)
283 PF08659 KR: KR domain; Inter 98.3 2.4E-06 5.1E-11 78.9 7.7 82 12-100 2-93 (181)
284 TIGR00715 precor6x_red precorr 98.3 2.8E-06 6.1E-11 82.7 8.2 96 11-121 1-99 (256)
285 cd01065 NAD_bind_Shikimate_DH 98.2 5.4E-06 1.2E-10 74.0 9.0 119 9-148 18-138 (155)
286 PLN02725 GDP-4-keto-6-deoxyman 98.2 2.6E-06 5.6E-11 84.2 7.6 58 14-99 1-60 (306)
287 cd01336 MDH_cytoplasmic_cytoso 98.2 5.8E-06 1.3E-10 83.5 9.4 138 9-168 1-143 (325)
288 KOG1207 Diacetyl reductase/L-x 98.1 2.4E-05 5.3E-10 70.6 10.4 107 11-130 8-119 (245)
289 KOG1429 dTDP-glucose 4-6-dehyd 98.1 1.2E-05 2.6E-10 77.8 8.5 80 8-101 25-104 (350)
290 KOG1210 Predicted 3-ketosphing 98.1 8.7E-06 1.9E-10 80.0 7.2 83 11-100 34-124 (331)
291 COG3320 Putative dehydrogenase 98.0 4.5E-05 9.8E-10 77.0 10.7 81 12-98 2-97 (382)
292 PF01118 Semialdhyde_dh: Semia 98.0 1.8E-05 4E-10 68.1 6.9 99 12-125 1-101 (121)
293 PLN02260 probable rhamnose bio 98.0 3.3E-05 7.1E-10 85.5 10.5 59 9-99 379-439 (668)
294 KOG1199 Short-chain alcohol de 98.0 2.1E-05 4.6E-10 70.8 7.2 80 9-99 8-94 (260)
295 PRK12549 shikimate 5-dehydroge 98.0 1.5E-05 3.2E-10 79.0 6.7 134 9-167 126-261 (284)
296 COG1090 Predicted nucleoside-d 97.9 8.9E-06 1.9E-10 78.7 4.8 65 13-98 1-66 (297)
297 PF01488 Shikimate_DH: Shikima 97.9 5.4E-05 1.2E-09 66.6 9.1 75 9-98 11-85 (135)
298 KOG1478 3-keto sterol reductas 97.9 4.4E-05 9.6E-10 72.8 8.8 99 12-112 5-113 (341)
299 PRK00258 aroE shikimate 5-dehy 97.9 4.4E-05 9.5E-10 75.4 8.7 130 10-167 123-255 (278)
300 PLN02968 Probable N-acetyl-gam 97.9 1.7E-05 3.7E-10 81.7 5.3 101 9-125 37-138 (381)
301 TIGR02813 omega_3_PfaA polyket 97.8 3.9E-05 8.5E-10 94.8 9.0 84 10-100 1997-2133(2582)
302 PRK14027 quinate/shikimate deh 97.8 9E-05 1.9E-09 73.4 9.8 124 10-149 127-252 (283)
303 TIGR00507 aroE shikimate 5-deh 97.8 6.6E-05 1.4E-09 73.8 8.8 129 10-167 117-248 (270)
304 TIGR01809 Shik-DH-AROM shikima 97.8 0.00015 3.1E-09 71.9 10.9 122 10-149 125-254 (282)
305 cd00704 MDH Malate dehydrogena 97.8 0.00025 5.4E-09 71.6 12.7 138 11-167 1-140 (323)
306 PRK14982 acyl-ACP reductase; P 97.8 8.6E-05 1.9E-09 75.1 9.2 119 9-157 154-273 (340)
307 COG0169 AroE Shikimate 5-dehyd 97.8 7.1E-05 1.5E-09 73.8 8.0 132 10-167 126-260 (283)
308 PRK06300 enoyl-(acyl carrier p 97.7 3.8E-05 8.2E-10 76.7 5.5 34 10-50 8-43 (299)
309 PRK13656 trans-2-enoyl-CoA red 97.7 0.00022 4.7E-09 73.1 10.7 79 9-99 40-142 (398)
310 PF00056 Ldh_1_N: lactate/mala 97.7 0.0005 1.1E-08 60.9 11.7 129 11-168 1-133 (141)
311 KOG1203 Predicted dehydrogenas 97.7 0.00023 5E-09 73.2 10.5 106 6-120 75-199 (411)
312 PRK00436 argC N-acetyl-gamma-g 97.7 9E-05 1.9E-09 75.5 7.4 101 11-126 3-104 (343)
313 PRK12749 quinate/shikimate deh 97.6 0.00038 8.1E-09 69.2 10.9 137 10-167 124-267 (288)
314 TIGR01850 argC N-acetyl-gamma- 97.6 0.0001 2.2E-09 75.1 6.7 103 11-126 1-104 (346)
315 TIGR03443 alpha_am_amid L-amin 97.6 0.0004 8.7E-09 83.0 12.5 88 10-100 971-1073(1389)
316 PTZ00325 malate dehydrogenase; 97.6 0.0013 2.8E-08 66.3 13.7 82 10-101 8-89 (321)
317 PRK13304 L-aspartate dehydroge 97.6 0.00081 1.8E-08 66.0 11.7 116 11-147 2-118 (265)
318 PRK14874 aspartate-semialdehyd 97.6 0.00021 4.5E-09 72.5 7.8 97 11-125 2-98 (334)
319 PF00899 ThiF: ThiF family; I 97.5 0.0004 8.6E-09 60.8 8.4 105 9-122 1-125 (135)
320 COG0002 ArgC Acetylglutamate s 97.5 0.00026 5.5E-09 70.9 7.5 106 10-127 2-107 (349)
321 TIGR02356 adenyl_thiF thiazole 97.5 0.00072 1.6E-08 63.6 9.9 104 9-121 20-143 (202)
322 TIGR01758 MDH_euk_cyt malate d 97.4 0.0011 2.4E-08 67.0 11.3 135 12-168 1-140 (324)
323 TIGR01759 MalateDH-SF1 malate 97.4 0.0011 2.3E-08 67.0 11.2 140 9-167 2-143 (323)
324 COG0569 TrkA K+ transport syst 97.4 0.00076 1.6E-08 64.6 9.6 129 11-168 1-133 (225)
325 PRK12475 thiamine/molybdopteri 97.4 0.00086 1.9E-08 68.1 10.5 103 10-121 24-148 (338)
326 PRK05671 aspartate-semialdehyd 97.4 0.00019 4.2E-09 72.7 5.6 100 8-125 2-101 (336)
327 PRK13302 putative L-aspartate 97.4 0.0025 5.5E-08 62.7 13.3 120 9-151 5-125 (271)
328 PLN00106 malate dehydrogenase 97.4 0.00098 2.1E-08 67.2 10.5 83 9-101 17-99 (323)
329 TIGR00518 alaDH alanine dehydr 97.4 0.0018 4E-08 66.6 11.9 74 9-97 166-239 (370)
330 TIGR02853 spore_dpaA dipicolin 97.3 0.0018 3.9E-08 64.3 11.2 114 10-151 151-264 (287)
331 PLN00112 malate dehydrogenase 97.3 0.0016 3.5E-08 68.1 11.3 142 7-168 97-241 (444)
332 PRK07688 thiamine/molybdopteri 97.3 0.0015 3.2E-08 66.5 10.7 103 10-121 24-148 (339)
333 PRK00066 ldh L-lactate dehydro 97.3 0.0035 7.7E-08 63.1 13.3 132 7-167 3-136 (315)
334 TIGR00036 dapB dihydrodipicoli 97.3 0.0052 1.1E-07 60.3 14.2 124 11-151 2-127 (266)
335 PRK06732 phosphopantothenate-- 97.3 0.00058 1.2E-08 65.6 7.2 73 13-100 19-93 (229)
336 TIGR01757 Malate-DH_plant mala 97.3 0.0021 4.5E-08 66.3 11.6 142 6-167 40-184 (387)
337 COG0373 HemA Glutamyl-tRNA red 97.3 0.0021 4.6E-08 66.4 11.5 95 10-122 178-275 (414)
338 PRK05086 malate dehydrogenase; 97.3 0.0034 7.3E-08 63.1 12.7 82 11-101 1-82 (312)
339 PF01113 DapB_N: Dihydrodipico 97.3 0.00048 1E-08 59.7 5.7 111 11-140 1-115 (124)
340 cd01338 MDH_choloroplast_like 97.2 0.0012 2.6E-08 66.7 8.9 137 9-167 1-142 (322)
341 cd00757 ThiF_MoeB_HesA_family 97.2 0.0023 4.9E-08 61.4 10.2 103 10-121 21-143 (228)
342 PRK08644 thiamine biosynthesis 97.2 0.0026 5.6E-08 60.4 10.4 105 9-122 27-151 (212)
343 TIGR01921 DAP-DH diaminopimela 97.2 0.007 1.5E-07 60.9 13.8 121 10-155 3-125 (324)
344 TIGR01296 asd_B aspartate-semi 97.2 0.00071 1.5E-08 68.8 6.8 96 12-125 1-96 (339)
345 KOG1221 Acyl-CoA reductase [Li 97.2 0.0023 5E-08 67.0 10.6 86 10-99 12-117 (467)
346 cd05213 NAD_bind_Glutamyl_tRNA 97.2 0.0032 7E-08 63.2 11.4 73 9-99 177-249 (311)
347 PRK08762 molybdopterin biosynt 97.2 0.002 4.4E-08 66.4 10.1 103 10-121 135-257 (376)
348 PLN02383 aspartate semialdehyd 97.2 0.0013 2.8E-08 67.0 8.5 98 8-125 5-104 (344)
349 PRK09496 trkA potassium transp 97.2 0.0022 4.8E-08 67.4 10.6 91 11-116 1-93 (453)
350 PRK14106 murD UDP-N-acetylmura 97.2 0.0026 5.7E-08 66.9 11.1 90 10-117 5-95 (450)
351 PRK05442 malate dehydrogenase; 97.2 0.0019 4.2E-08 65.2 9.6 138 8-167 2-144 (326)
352 PRK12550 shikimate 5-dehydroge 97.2 0.002 4.4E-08 63.4 9.5 123 11-167 123-250 (272)
353 COG0289 DapB Dihydrodipicolina 97.2 0.0039 8.5E-08 60.3 11.0 218 10-256 2-229 (266)
354 cd01483 E1_enzyme_family Super 97.2 0.0041 8.8E-08 54.9 10.4 103 12-123 1-123 (143)
355 PRK08664 aspartate-semialdehyd 97.1 0.0016 3.4E-08 66.5 8.7 103 10-124 3-110 (349)
356 PF03807 F420_oxidored: NADP o 97.1 0.0062 1.3E-07 49.7 10.4 91 12-121 1-94 (96)
357 cd05291 HicDH_like L-2-hydroxy 97.1 0.0062 1.3E-07 61.0 12.4 127 12-167 2-131 (306)
358 PRK08223 hypothetical protein; 97.1 0.0029 6.2E-08 62.6 9.7 104 9-120 26-150 (287)
359 TIGR01851 argC_other N-acetyl- 97.1 0.00082 1.8E-08 67.0 5.8 83 11-125 2-84 (310)
360 cd01487 E1_ThiF_like E1_ThiF_l 97.1 0.0044 9.6E-08 56.9 10.3 100 12-120 1-120 (174)
361 PRK05579 bifunctional phosphop 97.1 0.002 4.3E-08 66.9 8.8 73 9-100 187-279 (399)
362 TIGR00978 asd_EA aspartate-sem 97.1 0.0022 4.8E-08 65.2 9.0 102 11-125 1-108 (341)
363 PLN02520 bifunctional 3-dehydr 97.1 0.0028 6.2E-08 68.2 10.0 127 10-167 379-509 (529)
364 COG1712 Predicted dinucleotide 97.1 0.0077 1.7E-07 56.9 11.4 116 11-146 1-116 (255)
365 PRK08306 dipicolinate synthase 97.0 0.0064 1.4E-07 60.7 11.5 114 9-150 151-264 (296)
366 PRK05690 molybdopterin biosynt 97.0 0.0053 1.2E-07 59.5 10.6 103 9-120 31-153 (245)
367 TIGR02355 moeB molybdopterin s 97.0 0.0043 9.3E-08 60.0 9.8 103 10-121 24-146 (240)
368 PRK13303 L-aspartate dehydroge 97.0 0.0075 1.6E-07 59.2 11.7 122 11-152 2-123 (265)
369 cd00650 LDH_MDH_like NAD-depen 97.0 0.0035 7.5E-08 61.4 9.1 131 13-167 1-133 (263)
370 PRK05597 molybdopterin biosynt 97.0 0.0052 1.1E-07 62.9 10.7 104 9-121 27-150 (355)
371 PRK06223 malate dehydrogenase; 97.0 0.0043 9.3E-08 62.0 10.0 129 11-167 3-133 (307)
372 PRK08328 hypothetical protein; 97.0 0.0065 1.4E-07 58.4 10.7 103 10-121 27-150 (231)
373 PF03446 NAD_binding_2: NAD bi 97.0 0.0043 9.4E-08 56.1 9.0 112 11-148 2-118 (163)
374 PRK11863 N-acetyl-gamma-glutam 96.9 0.0012 2.6E-08 66.1 5.6 85 10-126 2-86 (313)
375 PRK05600 thiamine biosynthesis 96.9 0.0067 1.5E-07 62.4 11.1 103 10-121 41-163 (370)
376 PRK15116 sulfur acceptor prote 96.9 0.0084 1.8E-07 58.9 11.0 35 9-50 29-63 (268)
377 cd05294 LDH-like_MDH_nadp A la 96.9 0.0078 1.7E-07 60.4 11.0 129 11-167 1-135 (309)
378 PRK13940 glutamyl-tRNA reducta 96.9 0.0039 8.6E-08 65.0 8.8 72 10-98 181-252 (414)
379 PF02254 TrkA_N: TrkA-N domain 96.9 0.0088 1.9E-07 50.5 9.4 70 13-97 1-71 (116)
380 PLN02602 lactate dehydrogenase 96.8 0.027 6E-07 57.5 14.6 129 11-167 38-168 (350)
381 cd05292 LDH_2 A subgroup of L- 96.8 0.023 5E-07 57.0 13.8 128 11-167 1-130 (308)
382 cd01485 E1-1_like Ubiquitin ac 96.8 0.011 2.4E-07 55.4 10.3 104 10-121 19-145 (198)
383 PRK09620 hypothetical protein; 96.8 0.0018 4E-08 62.1 5.1 79 10-100 3-99 (229)
384 KOG4039 Serine/threonine kinas 96.8 0.0057 1.2E-07 55.7 7.9 115 10-153 18-136 (238)
385 cd05293 LDH_1 A subgroup of L- 96.8 0.015 3.3E-07 58.4 12.0 130 10-167 3-134 (312)
386 KOG1198 Zinc-binding oxidoredu 96.8 0.0086 1.9E-07 61.1 10.2 77 8-99 156-236 (347)
387 cd01075 NAD_bind_Leu_Phe_Val_D 96.8 0.016 3.4E-07 54.5 11.2 115 9-151 27-141 (200)
388 cd05295 MDH_like Malate dehydr 96.8 0.005 1.1E-07 64.6 8.5 140 6-167 119-264 (452)
389 PTZ00117 malate dehydrogenase; 96.7 0.009 1.9E-07 60.3 10.0 131 9-167 4-136 (319)
390 PRK07877 hypothetical protein; 96.7 0.0076 1.6E-07 66.9 10.0 105 10-123 107-230 (722)
391 PF10727 Rossmann-like: Rossma 96.7 0.0047 1E-07 53.8 6.7 53 1-61 1-54 (127)
392 cd05311 NAD_bind_2_malic_enz N 96.7 0.013 2.8E-07 56.2 10.3 115 9-148 24-150 (226)
393 PLN00203 glutamyl-tRNA reducta 96.7 0.016 3.5E-07 62.1 11.9 73 10-97 266-338 (519)
394 PRK09310 aroDE bifunctional 3- 96.7 0.015 3.4E-07 61.8 11.6 119 10-167 332-450 (477)
395 PRK00045 hemA glutamyl-tRNA re 96.6 0.013 2.7E-07 61.5 10.7 72 9-98 181-252 (423)
396 PRK06728 aspartate-semialdehyd 96.6 0.0069 1.5E-07 61.6 8.3 99 8-126 3-104 (347)
397 COG2085 Predicted dinucleotide 96.6 0.01 2.2E-07 55.8 8.7 69 12-100 2-71 (211)
398 PRK08655 prephenate dehydrogen 96.6 0.014 3E-07 61.5 10.8 91 11-123 1-94 (437)
399 PRK08040 putative semialdehyde 96.6 0.0035 7.7E-08 63.5 6.1 99 8-124 2-100 (336)
400 cd00755 YgdL_like Family of ac 96.6 0.013 2.8E-07 56.3 9.6 34 10-50 11-44 (231)
401 PRK13301 putative L-aspartate 96.6 0.03 6.6E-07 54.6 12.1 118 11-150 3-122 (267)
402 PRK05447 1-deoxy-D-xylulose 5- 96.6 0.11 2.4E-06 53.5 16.4 124 11-148 2-147 (385)
403 PRK07878 molybdopterin biosynt 96.5 0.014 2.9E-07 60.7 9.9 104 9-121 41-164 (392)
404 PRK07340 ornithine cyclodeamin 96.5 0.0039 8.5E-08 62.4 5.8 102 10-130 125-226 (304)
405 smart00859 Semialdhyde_dh Semi 96.5 0.0056 1.2E-07 52.5 6.0 98 12-125 1-103 (122)
406 cd01492 Aos1_SUMO Ubiquitin ac 96.5 0.016 3.6E-07 54.2 9.5 101 10-120 21-141 (197)
407 PRK08618 ornithine cyclodeamin 96.5 0.011 2.3E-07 59.9 8.8 102 10-128 127-228 (325)
408 TIGR01035 hemA glutamyl-tRNA r 96.5 0.022 4.8E-07 59.6 11.4 70 10-97 180-249 (417)
409 cd01484 E1-2_like Ubiquitin ac 96.5 0.018 4E-07 55.4 10.0 102 12-121 1-123 (234)
410 cd05290 LDH_3 A subgroup of L- 96.5 0.047 1E-06 54.8 13.3 128 12-168 1-134 (307)
411 cd01337 MDH_glyoxysomal_mitoch 96.5 0.038 8.2E-07 55.5 12.5 83 11-103 1-83 (310)
412 PRK09496 trkA potassium transp 96.5 0.018 4E-07 60.4 10.8 75 10-97 231-306 (453)
413 PRK12428 3-alpha-hydroxysteroi 96.5 0.0035 7.6E-08 60.1 5.0 80 26-132 1-84 (241)
414 PRK14851 hypothetical protein; 96.5 0.016 3.6E-07 64.0 10.6 105 9-121 42-167 (679)
415 PRK11559 garR tartronate semia 96.5 0.018 4E-07 57.1 10.1 111 11-148 3-120 (296)
416 PRK07411 hypothetical protein; 96.5 0.016 3.4E-07 60.1 9.9 103 10-121 38-160 (390)
417 COG0623 FabI Enoyl-[acyl-carri 96.4 0.032 7E-07 53.0 10.8 96 10-123 6-110 (259)
418 PRK09599 6-phosphogluconate de 96.4 0.081 1.8E-06 52.8 14.5 112 12-147 2-117 (301)
419 TIGR00872 gnd_rel 6-phosphoglu 96.4 0.034 7.4E-07 55.5 11.8 112 11-147 1-116 (298)
420 PF02571 CbiJ: Precorrin-6x re 96.4 0.014 3.1E-07 56.7 8.8 97 11-121 1-100 (249)
421 cd01489 Uba2_SUMO Ubiquitin ac 96.4 0.018 4E-07 57.7 9.6 102 12-121 1-122 (312)
422 PF01408 GFO_IDH_MocA: Oxidore 96.4 0.062 1.3E-06 45.4 11.6 109 11-144 1-115 (120)
423 TIGR01915 npdG NADPH-dependent 96.4 0.019 4.1E-07 54.6 9.0 76 11-97 1-77 (219)
424 PRK08057 cobalt-precorrin-6x r 96.3 0.018 3.9E-07 55.9 8.8 94 11-121 3-99 (248)
425 PRK06153 hypothetical protein; 96.3 0.022 4.8E-07 58.4 9.7 101 10-121 176-298 (393)
426 TIGR01505 tartro_sem_red 2-hyd 96.3 0.024 5.1E-07 56.2 9.5 109 12-147 1-116 (291)
427 TIGR01761 thiaz-red thiazoliny 96.2 0.049 1.1E-06 55.5 11.8 115 9-146 2-119 (343)
428 COG2084 MmsB 3-hydroxyisobutyr 96.2 0.067 1.5E-06 52.9 12.4 106 12-146 2-117 (286)
429 TIGR02114 coaB_strep phosphopa 96.2 0.0075 1.6E-07 57.8 5.5 68 12-99 17-91 (227)
430 PTZ00082 L-lactate dehydrogena 96.2 0.11 2.3E-06 52.6 13.9 131 8-167 4-142 (321)
431 cd01339 LDH-like_MDH L-lactate 96.2 0.043 9.4E-07 54.7 10.9 125 13-167 1-129 (300)
432 cd00300 LDH_like L-lactate deh 96.2 0.093 2E-06 52.4 13.2 127 13-167 1-129 (300)
433 PRK06270 homoserine dehydrogen 96.1 0.42 9.1E-06 48.7 17.9 169 10-202 2-190 (341)
434 COG0673 MviM Predicted dehydro 96.1 0.13 2.7E-06 51.8 14.0 117 9-146 2-122 (342)
435 TIGR00521 coaBC_dfp phosphopan 96.1 0.02 4.4E-07 59.2 8.2 74 9-101 184-278 (390)
436 PRK14852 hypothetical protein; 96.0 0.038 8.2E-07 62.8 10.6 105 9-121 331-456 (989)
437 TIGR02130 dapB_plant dihydrodi 96.0 0.059 1.3E-06 53.0 10.7 107 11-134 1-111 (275)
438 PRK08291 ectoine utilization p 96.0 0.021 4.6E-07 57.8 7.8 97 10-123 132-229 (330)
439 cd01486 Apg7 Apg7 is an E1-lik 96.0 0.05 1.1E-06 54.1 10.0 23 12-35 1-23 (307)
440 PRK10669 putative cation:proto 96.0 0.11 2.3E-06 56.6 13.6 130 11-169 418-549 (558)
441 COG0039 Mdh Malate/lactate deh 95.9 0.042 9.1E-07 55.0 9.4 128 11-168 1-133 (313)
442 PRK12490 6-phosphogluconate de 95.9 0.043 9.3E-07 54.7 9.6 113 12-148 2-118 (299)
443 TIGR02992 ectoine_eutC ectoine 95.9 0.02 4.2E-07 58.0 7.0 100 10-126 129-229 (326)
444 PRK04148 hypothetical protein; 95.9 0.069 1.5E-06 46.8 9.4 97 9-124 16-114 (134)
445 PLN02350 phosphogluconate dehy 95.8 0.23 5E-06 53.0 15.1 119 11-146 7-129 (493)
446 COG1064 AdhP Zn-dependent alco 95.8 0.06 1.3E-06 54.4 10.1 72 10-97 167-238 (339)
447 TIGR02354 thiF_fam2 thiamine b 95.8 0.058 1.3E-06 50.7 9.4 79 10-96 21-118 (200)
448 PRK03562 glutathione-regulated 95.8 0.037 8.1E-07 60.9 9.2 73 10-97 400-473 (621)
449 PRK06141 ornithine cyclodeamin 95.8 0.04 8.7E-07 55.4 8.6 102 10-130 125-228 (314)
450 COG0743 Dxr 1-deoxy-D-xylulose 95.7 0.34 7.5E-06 49.1 14.9 124 11-148 2-145 (385)
451 PRK06598 aspartate-semialdehyd 95.7 0.028 6.1E-07 57.6 7.4 98 11-124 2-101 (369)
452 TIGR01772 MDH_euk_gproteo mala 95.7 0.055 1.2E-06 54.4 9.4 82 12-103 1-82 (312)
453 cd08295 double_bond_reductase_ 95.7 0.065 1.4E-06 53.9 10.0 74 10-97 152-230 (338)
454 PF01210 NAD_Gly3P_dh_N: NAD-d 95.7 0.027 6E-07 50.6 6.5 75 12-96 1-77 (157)
455 cd01080 NAD_bind_m-THF_DH_Cycl 95.7 0.035 7.6E-07 50.7 7.2 55 9-98 43-97 (168)
456 PRK08300 acetaldehyde dehydrog 95.7 0.076 1.6E-06 53.0 10.1 97 9-123 3-103 (302)
457 cd08259 Zn_ADH5 Alcohol dehydr 95.7 0.082 1.8E-06 52.4 10.5 93 10-121 163-256 (332)
458 COG1089 Gmd GDP-D-mannose dehy 95.7 0.017 3.8E-07 56.4 5.2 82 11-99 3-89 (345)
459 PTZ00142 6-phosphogluconate de 95.6 0.075 1.6E-06 56.4 10.5 118 11-146 2-123 (470)
460 PRK03659 glutathione-regulated 95.6 0.046 1E-06 59.9 9.1 89 10-114 400-489 (601)
461 PRK06349 homoserine dehydrogen 95.6 0.35 7.6E-06 50.8 15.2 119 10-146 3-127 (426)
462 PF02670 DXP_reductoisom: 1-de 95.6 0.11 2.5E-06 45.2 9.6 45 13-62 1-47 (129)
463 TIGR01692 HIBADH 3-hydroxyisob 95.6 0.065 1.4E-06 53.1 9.3 106 18-148 3-114 (288)
464 PRK02472 murD UDP-N-acetylmura 95.6 0.068 1.5E-06 56.2 9.9 90 11-118 6-96 (447)
465 PRK15461 NADH-dependent gamma- 95.5 0.088 1.9E-06 52.4 10.0 108 12-146 3-117 (296)
466 TIGR01763 MalateDH_bact malate 95.5 0.089 1.9E-06 52.7 10.1 129 11-167 2-132 (305)
467 COG0604 Qor NADPH:quinone redu 95.5 0.055 1.2E-06 54.7 8.6 74 10-98 143-221 (326)
468 cd08293 PTGR2 Prostaglandin re 95.5 0.11 2.5E-06 52.0 10.8 93 11-120 156-253 (345)
469 PRK00094 gpsA NAD(P)H-dependen 95.4 0.063 1.4E-06 53.7 8.7 79 11-98 2-81 (325)
470 PRK04207 glyceraldehyde-3-phos 95.4 0.085 1.8E-06 53.7 9.6 102 11-123 2-111 (341)
471 PRK09424 pntA NAD(P) transhydr 95.4 0.19 4.1E-06 53.9 12.4 99 9-122 164-286 (509)
472 TIGR01019 sucCoAalpha succinyl 95.4 0.1 2.3E-06 51.7 9.8 117 10-153 6-127 (286)
473 TIGR02825 B4_12hDH leukotriene 95.3 0.11 2.3E-06 52.0 9.9 74 10-98 139-217 (325)
474 PLN03154 putative allyl alcoho 95.3 0.067 1.5E-06 54.4 8.5 74 10-97 159-237 (348)
475 TIGR00561 pntA NAD(P) transhyd 95.3 0.13 2.8E-06 55.0 10.8 98 9-122 163-285 (511)
476 KOG1431 GDP-L-fucose synthetas 95.3 0.078 1.7E-06 50.3 7.9 61 11-97 2-64 (315)
477 KOG0023 Alcohol dehydrogenase, 95.2 0.096 2.1E-06 52.2 8.7 74 10-97 182-255 (360)
478 TIGR01381 E1_like_apg7 E1-like 95.1 0.12 2.6E-06 56.3 10.1 104 9-120 337-479 (664)
479 TIGR00873 gnd 6-phosphoglucona 95.1 0.19 4.1E-06 53.4 11.4 116 12-146 1-120 (467)
480 PLN02696 1-deoxy-D-xylulose-5- 95.1 0.41 8.9E-06 50.2 13.5 125 10-148 57-205 (454)
481 TIGR03736 PRTRC_ThiF PRTRC sys 95.0 0.17 3.8E-06 49.0 9.9 99 8-112 9-129 (244)
482 TIGR02371 ala_DH_arch alanine 95.0 0.084 1.8E-06 53.4 8.0 103 10-130 128-231 (325)
483 KOG0747 Putative NAD+-dependen 95.0 0.051 1.1E-06 53.2 6.0 105 11-124 7-134 (331)
484 PRK14192 bifunctional 5,10-met 94.9 0.076 1.7E-06 52.6 7.3 74 9-121 158-231 (283)
485 cd05296 GH4_P_beta_glucosidase 94.8 0.49 1.1E-05 49.6 13.4 144 11-167 1-158 (419)
486 TIGR01771 L-LDH-NAD L-lactate 94.8 0.27 5.9E-06 49.1 10.9 124 15-167 1-127 (299)
487 cd05276 p53_inducible_oxidored 94.7 0.3 6.5E-06 47.6 11.0 74 10-98 140-218 (323)
488 COG2099 CobK Precorrin-6x redu 94.7 0.11 2.3E-06 50.2 7.4 96 10-121 2-100 (257)
489 TIGR03693 ocin_ThiF_like putat 94.7 0.21 4.6E-06 54.0 10.4 101 9-118 128-235 (637)
490 PRK06129 3-hydroxyacyl-CoA deh 94.7 0.055 1.2E-06 54.2 5.7 40 11-58 3-42 (308)
491 PF02826 2-Hacid_dh_C: D-isome 94.7 0.096 2.1E-06 48.1 6.9 66 9-97 35-100 (178)
492 COG1179 Dinucleotide-utilizing 94.6 0.41 8.9E-06 46.0 10.9 104 10-122 30-154 (263)
493 PRK06823 ornithine cyclodeamin 94.6 0.12 2.6E-06 52.0 7.9 103 10-130 128-231 (315)
494 TIGR00243 Dxr 1-deoxy-D-xylulo 94.5 0.61 1.3E-05 47.9 12.8 124 11-148 2-149 (389)
495 PRK07502 cyclohexadienyl dehyd 94.5 0.27 5.8E-06 49.1 10.3 93 11-123 7-102 (307)
496 PF01262 AlaDh_PNT_C: Alanine 94.5 0.11 2.4E-06 47.2 6.9 73 9-96 19-110 (168)
497 cd01491 Ube1_repeat1 Ubiquitin 94.5 0.19 4.2E-06 49.8 9.0 99 10-120 19-136 (286)
498 PRK08374 homoserine dehydrogen 94.5 1.9 4.1E-05 43.8 16.4 139 10-155 2-155 (336)
499 COG0686 Ald Alanine dehydrogen 94.4 0.12 2.6E-06 51.3 7.1 72 10-96 168-239 (371)
500 PRK09260 3-hydroxybutyryl-CoA 94.4 0.036 7.7E-07 54.9 3.7 78 12-97 3-90 (288)
No 1
>KOG2733 consensus Uncharacterized membrane protein [Function unknown]
Probab=100.00 E-value=3.2e-94 Score=696.27 Aligned_cols=411 Identities=43% Similarity=0.760 Sum_probs=371.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC---CCCCccEEEEeCCCHHHHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS---HSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~---~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
+||++|+|||||+|+++++++++.+.- +...|+++|||++||++++++++.. +.....++.+|.+|+++|.+++
T Consensus 5 ~yDvVIyGASGfTG~yivee~v~~~~~---~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~ema 81 (423)
T KOG2733|consen 5 RYDVVIYGASGFTGKYIVEEAVSSQVF---EGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMA 81 (423)
T ss_pred eeeEEEEccccccceeeHHHHhhhhcc---cCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHH
Confidence 699999999999999999999994421 1289999999999999999988652 2233459999999999999999
Q ss_pred cCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhh
Q 012947 87 SQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQ 166 (452)
Q Consensus 87 ~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~ 166 (452)
+++.+||||+|||..+|++|++||+++|+||||++||+.|++.|+.+||++|+++|+.||++|||||+|.||+++++.+.
T Consensus 82 k~~~vivN~vGPyR~hGE~VVkacienG~~~vDISGEP~f~E~mq~kYhd~A~ekGVYIVsaCGfDSIPaDlGv~f~~k~ 161 (423)
T KOG2733|consen 82 KQARVIVNCVGPYRFHGEPVVKACIENGTHHVDISGEPQFMERMQLKYHDLAKEKGVYIVSACGFDSIPADLGVMFLRKN 161 (423)
T ss_pred hhhEEEEeccccceecCcHHHHHHHHcCCceeccCCCHHHHHHHHHHHHHHHHhcCeEEEeecccCCCCccceeeeehhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcceEEEEEEecc-CCc-cccccccHHHHHHhHhcchhhHHHHhcCCCCCCCCCCCCCCCCCCccccccccCeEE
Q 012947 167 WIPPAVPNQIEAYVSLES-DKR-IVGNFGTYESAVLGVANAQELQKLRRSRPRRARPVIPGPAPLRGPLVESQKRIGLWA 244 (452)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~-~~~-~~g~~GT~~S~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (452)
+. +.++.||+|+.|+. |++ ++-|.|||+|+++++++.+++.+||++..|.+++... |++++++.++..++.+.|+
T Consensus 162 fd--g~ln~VEsfl~Lh~~gp~G~sln~gTweSallg~~n~~~l~~lR~~~~p~~ip~~~-~~lkkR~~l~~~~e~~g~a 238 (423)
T KOG2733|consen 162 FD--GVLNHVESFLQLHSKGPSGYSLNTGTWESALLGVANASELKALRKSIMPQPIPNGC-PPLKKRPTLWKIKEKGGVA 238 (423)
T ss_pred cc--ccHHHHHHHHhhhccCCcccccccccHHHHHHHhcChHHHHHHHhhhCCCcCccCC-CCCCCCCceeeeeeccceE
Confidence 98 56889999999987 654 5567899999999999999999999998877765543 3456677777778888999
Q ss_pred EeCCCCchhhhhhhhhccccCCCCCCCCCCChhHHhhhhhhcCCCcCeeEEEEeeccchHHHHHHHHHHHHHHHhhccch
Q 012947 245 IKLPSADATVVRRTLSILTENPHGLPGANESPEQREKREAFWSTVKPAHFGVKLGSKSLLDIFRFIILGISIGLLSGLSF 324 (452)
Q Consensus 245 ~~f~~~d~~vV~RS~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 324 (452)
+||+++|.+||+|||.++... ...+|.||..|++++++++++.+++++.++.++++|++
T Consensus 239 lpFpgaD~SVV~RSQ~~l~~~---------------------~~~rPv~~~ay~~~~s~~~~~~~~~~~~~~~~fskf~~ 297 (423)
T KOG2733|consen 239 LPFPGADKSVVRRSQYYLYES---------------------RKVRPVHMQAYITVGSRFGAIKLVFFGWILGFFSKFSF 297 (423)
T ss_pred eecCCCchhheehHHHHHHHh---------------------ccCCceeEEEEEeeccchHHHHHHHHHHHHHHHHhhhH
Confidence 999999999999999876532 24679999999999999999999999999999999999
Q ss_pred hhhhhhccCcccccCccCCCCCCHhhhccceEEEEEEEEecCCCccccc-CCCCCCceEEEEEecCCCcchhHHHHHHHH
Q 012947 325 GRWLLLKFPSIFSLGWFRKRGPSEDEVESASFKMWFIGHGFSDSSLVSQ-GNAKPDMEIITRVTGPEIGYIATPIILMQC 403 (452)
Q Consensus 325 ~R~ll~~~p~~fs~g~~~g~GPs~~~~~~~~f~~~~~a~g~~~~~~~~~-~~~~~~~~~~~~~~g~dpgY~~Ta~~l~e~ 403 (452)
+||||++||++||+|+|+.+|||++||++..|+++|+|.||++.+..++ ++.+++++++++++||||||.+|++++.++
T Consensus 298 gR~lLlkyP~~fSfg~fsksGPSe~qm~~AtFt~~f~g~Gy~~~~~l~~~~~~~~~~kl~~~~sGPd~gYiaT~i~vlsa 377 (423)
T KOG2733|consen 298 GRRLLLKYPDFFSFGMFSKSGPSEEQMEEATFTMWFFGYGYKEGEPLDKQHEQKTDKKLLVRCSGPDPGYIATSICVLSA 377 (423)
T ss_pred HHHHHHhCcccccccccccCCCCHHHHhhcEEEEEEEEeccCCCCccccccccccccEEEEEecCCCcchhhccHHHHHH
Confidence 9999999999999999999999999999999999999999988554443 344567899999999999999999999999
Q ss_pred HHHhhhccCCCC-CCccccccccccCCchHHHHhhCCcEEEEeeC
Q 012947 404 ALIVLSQREILP-KGGVFPPGIVFGATELQQRLQENGISFDVISK 447 (452)
Q Consensus 404 Al~ll~~~~~~~-~gGvlTPa~afg~~~li~rL~~~G~~f~v~~~ 447 (452)
||+||.+++++| .|||||||+|||+|+++|||+++|++||++++
T Consensus 378 alt~L~~~~~lpk~GGV~tPaaaF~~T~i~~~L~~~GI~Fel~s~ 422 (423)
T KOG2733|consen 378 ALTLLKDKDKLPKGGGVYTPAAAFGNTKIIDRLAKHGIKFELISE 422 (423)
T ss_pred HHHHHHHhhcCCCCCCccCchhhhcCChHHHHHHhcCceEEEEeC
Confidence 999999999999 79999999999999999999999999999875
No 2
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=100.00 E-value=6.3e-56 Score=427.13 Aligned_cols=368 Identities=28% Similarity=0.424 Sum_probs=277.2
Q ss_pred CCCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 012947 6 QIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 6 ~~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
.+.++++++|+|||||+|+.++++|++++ .+.++++||..|+..+.+.|+. +.. ..++-+++.++++
T Consensus 2 ~~e~e~d~iiYGAtGy~G~lvae~l~~~g-------~~~aLAgRs~~kl~~l~~~LG~----~~~--~~p~~~p~~~~~~ 68 (382)
T COG3268 2 PMEREYDIIIYGATGYAGGLVAEYLAREG-------LTAALAGRSSAKLDALRASLGP----EAA--VFPLGVPAALEAM 68 (382)
T ss_pred CCCcceeEEEEccccchhHHHHHHHHHcC-------CchhhccCCHHHHHHHHHhcCc----ccc--ccCCCCHHHHHHH
Confidence 45688999999999999999999999998 5679999999999999998852 333 3344559999999
Q ss_pred HcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhh
Q 012947 86 CSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSR 165 (452)
Q Consensus 86 ~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~ 165 (452)
+++++||+||+|||..++++++++|+.+|+||+||+||..|.+.++.+||++|+.+|+.||++|||||+|+|+++|.+.+
T Consensus 69 ~~~~~VVlncvGPyt~~g~plv~aC~~~GTdY~DiTGEi~~fe~~i~~yh~~A~~~Ga~Ii~~cGFDsIPsDl~v~~l~~ 148 (382)
T COG3268 69 ASRTQVVLNCVGPYTRYGEPLVAACAAAGTDYADITGEIMFFENSIDLYHAQAADAGARIIPGCGFDSIPSDLGVYALLK 148 (382)
T ss_pred HhcceEEEeccccccccccHHHHHHHHhCCCeeeccccHHHHHHHHHHHHHHHHhcCCEEeccCCCCcCccchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred hcCCCC--CcceEEEEEEeccCCccccccccHHHHHHhHhcchhhHHHHhc-CCCCCCCCCCC--CCCCCCCcccccccc
Q 012947 166 QWIPPA--VPNQIEAYVSLESDKRIVGNFGTYESAVLGVANAQELQKLRRS-RPRRARPVIPG--PAPLRGPLVESQKRI 240 (452)
Q Consensus 166 ~~~~~~--~~~~~~~~~~~~~~~~~~g~~GT~~S~~~~~~~~~~~~~l~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~ 240 (452)
+..+.+ ++-..+..+....+.++|| ||.+|.+..+......+.-++. ..|+.+..-.. +..+.+.-.+..+.+
T Consensus 149 ~~~~d~~~~~~~t~l~l~s~t~~g~S~--GTaat~~e~l~~~~~~~~~gr~~~~P~~~~~~r~~~iDf~~~rg~~~a~~~ 226 (382)
T COG3268 149 QALPDGTEELIATHLALGSFTGSGISG--GTAATSVEGLATAGKDPEAGRLLRVPYALKKRRGAEIDFPSRRGRRLAPTL 226 (382)
T ss_pred hhCcccccchhhhheeeeecccCCccc--ccHHHHHHHHHhccCCcccCceeccCceeccCCCCCCCcccCCccccCccc
Confidence 887652 3334555554444444666 9999999998876555433332 33444322111 111111111122233
Q ss_pred CeEEEeC--CCCchhhhhhhhhccccCCCCCCCCCCChhHHhhhhhhcCCCcCeeEEEEeeccchHHHH-HHHHHHHHHH
Q 012947 241 GLWAIKL--PSADATVVRRTLSILTENPHGLPGANESPEQREKREAFWSTVKPAHFGVKLGSKSLLDIF-RFIILGISIG 317 (452)
Q Consensus 241 ~~~~~~f--~~~d~~vV~RS~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~-~~~~~~~~~~ 317 (452)
+ | +| ...|+.||+|||.+. . |.+ .+..+.+. ..+...+.+.
T Consensus 227 ~-W--g~V~a~~~t~iv~rsn~l~-~---------------------~~~-----------~~pv~~~a~~~~~~~~~ll 270 (382)
T COG3268 227 P-W--GFVAAAFNTTIVPRSNALE-V---------------------WIY-----------AAPVLALAGRGIGALLPLL 270 (382)
T ss_pred C-c--hhhhhhhccCcccccccee-e---------------------eec-----------hhHHHHHHHhccchhhhhh
Confidence 3 6 55 488999999999772 1 111 11111111 1111111111
Q ss_pred Hhhc-cchhhhhhhcc-CcccccCccCCCCCCHhhhccceEEEEEEEEecCCCcccccCCCCCCceEEEEEecCCCcchh
Q 012947 318 LLSG-LSFGRWLLLKF-PSIFSLGWFRKRGPSEDEVESASFKMWFIGHGFSDSSLVSQGNAKPDMEIITRVTGPEIGYIA 395 (452)
Q Consensus 318 ~l~~-~~~~R~ll~~~-p~~fs~g~~~g~GPs~~~~~~~~f~~~~~a~g~~~~~~~~~~~~~~~~~~~~~~~g~dpgY~~ 395 (452)
.... -.+.|+++.|+ |+ ||.||++|.++.|++.++.+++..++ .+..+++..... |..
T Consensus 271 ~~~~~~~~~r~lv~r~~~k-------~g~GPt~e~qarg~~~~~~~~~tatG------------~r~~ari~t~~~-y~s 330 (382)
T COG3268 271 GSAYVRDLLRGLVLRVVPK-------PGTGPTEEAQARGRYTIEGETTTATG------------ERYTARITTDND-YYS 330 (382)
T ss_pred hhHHHhhhhHhhhheeccC-------CCCCCCHHHHhcCcceEEEEEEeccC------------CceeeEEecccc-hHH
Confidence 1111 23567777777 43 99999999999999999988876432 235678887755 999
Q ss_pred HHHHHHHHHHHhhhccCCCC-CCccccccccccCCchHHHHhhCCcEEEEe
Q 012947 396 TPIILMQCALIVLSQREILP-KGGVFPPGIVFGATELQQRLQENGISFDVI 445 (452)
Q Consensus 396 Ta~~l~e~Al~ll~~~~~~~-~gGvlTPa~afg~~~li~rL~~~G~~f~v~ 445 (452)
|++.++++|++++.+++++. .|||+|||++||. +||+||-.+|+.|++.
T Consensus 331 tav~~a~~~l~~ald~~~~~~~gGv~TPA~~lG~-dlv~rLp~aGv~~~~~ 380 (382)
T COG3268 331 TAVLLAQAALALALDRDKLSEPGGVLTPAAALGA-DLVERLPGAGVTFGTT 380 (382)
T ss_pred HHHHHHHHHHHHHhcCCcccCCCcccChHHHHhH-HHHHhcccccceeecc
Confidence 99999999999999998776 7999999999996 8999999999999864
No 3
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=99.92 E-value=1.8e-24 Score=222.76 Aligned_cols=150 Identities=27% Similarity=0.472 Sum_probs=121.6
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCCCCCCce-EEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCccE
Q 012947 13 VIILGASGFTGKYVVREALKLFNFPSSPIK-SLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (452)
Q Consensus 13 ilV~GATG~iG~~va~~L~~~g~~~~~~~~-~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~dv 91 (452)
|+|+|| |++|+.++++|+++.+ . +|++++|+.++++++.+++. ..++..+.+|++|.++|.++++++|+
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~------~~~v~va~r~~~~~~~~~~~~~---~~~~~~~~~d~~~~~~l~~~~~~~dv 70 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGP------FEEVTVADRNPEKAERLAEKLL---GDRVEAVQVDVNDPESLAELLRGCDV 70 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTC------E-EEEEEESSHHHHHHHHT--T---TTTEEEEE--TTTHHHHHHHHTTSSE
T ss_pred CEEEcC-cHHHHHHHHHHhcCCC------CCcEEEEECCHHHHHHHHhhcc---ccceeEEEEecCCHHHHHHHHhcCCE
Confidence 799999 9999999999999874 5 99999999999999987652 46889999999999999999999999
Q ss_pred EeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhcCCCC
Q 012947 92 LLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIPPA 171 (452)
Q Consensus 92 VIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~~~~~ 171 (452)
||||+||+ ++.+++++|++.|+||||.+. +...+..+++.|+++|+.++++||++++++++.+..+.+++..
T Consensus 71 Vin~~gp~--~~~~v~~~~i~~g~~yvD~~~----~~~~~~~l~~~a~~~g~~~l~~~G~~PGl~~~~a~~~~~~~~~-- 142 (386)
T PF03435_consen 71 VINCAGPF--FGEPVARACIEAGVHYVDTSY----VTEEMLALDEEAKEAGVTALPGCGFDPGLSNLLARYAADELDA-- 142 (386)
T ss_dssp EEE-SSGG--GHHHHHHHHHHHT-EEEESS-----HHHHHHHCHHHHHHTTSEEE-S-BTTTBHHHHHHHHHHHHHHH--
T ss_pred EEECCccc--hhHHHHHHHHHhCCCeeccch----hHHHHHHHHHHHHhhCCEEEeCcccccchHHHHHHHHHHHhhh--
Confidence 99999998 668999999999999999654 3444578899999999999999999999999999999999972
Q ss_pred CcceEEEEE
Q 012947 172 VPNQIEAYV 180 (452)
Q Consensus 172 ~~~~~~~~~ 180 (452)
....++++.
T Consensus 143 ~~~~v~~~~ 151 (386)
T PF03435_consen 143 EGDEVESVD 151 (386)
T ss_dssp TTHEEEEEE
T ss_pred hcccceEEE
Confidence 234444444
No 4
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=99.75 E-value=3.2e-17 Score=166.19 Aligned_cols=152 Identities=22% Similarity=0.364 Sum_probs=133.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
++|+|+|| |++|+.++..|+++++ .+|.+++|+.++++++.+.. ..+++.+++|+.|.+++.+++++.|
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d------~~V~iAdRs~~~~~~i~~~~----~~~v~~~~vD~~d~~al~~li~~~d 70 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGD------GEVTIADRSKEKCARIAELI----GGKVEALQVDAADVDALVALIKDFD 70 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCC------ceEEEEeCCHHHHHHHHhhc----cccceeEEecccChHHHHHHHhcCC
Confidence 57999999 9999999999999984 79999999999998887754 3489999999999999999999999
Q ss_pred EEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhcCCC
Q 012947 91 LLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIPP 170 (452)
Q Consensus 91 vVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~~~~ 170 (452)
+||||+.|+.. ..++++|+++|+||||++...... .++++.++++|+.+|+.|||++.-+++.+..+++++.+
T Consensus 71 ~VIn~~p~~~~--~~i~ka~i~~gv~yvDts~~~~~~----~~~~~~a~~Agit~v~~~G~dPGi~nv~a~~a~~~~~~- 143 (389)
T COG1748 71 LVINAAPPFVD--LTILKACIKTGVDYVDTSYYEEPP----WKLDEEAKKAGITAVLGCGFDPGITNVLAAYAAKELFD- 143 (389)
T ss_pred EEEEeCCchhh--HHHHHHHHHhCCCEEEcccCCchh----hhhhHHHHHcCeEEEcccCcCcchHHHHHHHHHHHhhc-
Confidence 99999977644 689999999999999999766552 56789999999999999999999999999888888863
Q ss_pred CCcceEEEEEE
Q 012947 171 AVPNQIEAYVS 181 (452)
Q Consensus 171 ~~~~~~~~~~~ 181 (452)
...+++++..
T Consensus 144 -~i~si~iy~g 153 (389)
T COG1748 144 -EIESIDIYVG 153 (389)
T ss_pred -cccEEEEEEe
Confidence 4677777765
No 5
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=99.55 E-value=1.4e-14 Score=140.19 Aligned_cols=149 Identities=19% Similarity=0.225 Sum_probs=108.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
+...++|||||++||+.+++.|+++| +++++++|+++||+++.+++.......+.++.+|++|++++.++.+
T Consensus 5 ~~~~~lITGASsGIG~~~A~~lA~~g-------~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~ 77 (265)
T COG0300 5 KGKTALITGASSGIGAELAKQLARRG-------YNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDE 77 (265)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHH
Confidence 34689999999999999999999999 8999999999999999999864234567899999999999988775
Q ss_pred ------CccEEeecCCCCCCCCHHHHHHHHH--hCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHH
Q 012947 88 ------QTKLLLNCVGPYRLHGDPVAAACVH--SGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELG 159 (452)
Q Consensus 88 ------~~dvVIn~aGp~~~~~~~vv~ac~~--~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~ 159 (452)
.+|++|||||... ++ ++.+.-.+ ...--+++.+...+++.+.+.+.++.+..-+.|.|..|+-+.| .+.
T Consensus 78 l~~~~~~IdvLVNNAG~g~-~g-~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p-~~a 154 (265)
T COG0300 78 LKERGGPIDVLVNNAGFGT-FG-PFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTP-YMA 154 (265)
T ss_pred HHhcCCcccEEEECCCcCC-cc-chhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCc-chH
Confidence 5899999999533 22 12221111 1122345556666667776666553333333466778887776 567
Q ss_pred HHHHhhhc
Q 012947 160 VMFNSRQW 167 (452)
Q Consensus 160 ~~~~~~~~ 167 (452)
+|.+.|.+
T Consensus 155 vY~ATKa~ 162 (265)
T COG0300 155 VYSATKAF 162 (265)
T ss_pred HHHHHHHH
Confidence 77776665
No 6
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=99.37 E-value=1.7e-11 Score=138.20 Aligned_cols=159 Identities=18% Similarity=0.164 Sum_probs=123.2
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCC-------CCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFP-------SSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPS 81 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~-------~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~s 81 (452)
+..+|+|+|| |++|+.++++|++..... ......|++++++.++++++.+.+ .++..+..|++|.++
T Consensus 568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~-----~~~~~v~lDv~D~e~ 641 (1042)
T PLN02819 568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI-----ENAEAVQLDVSDSES 641 (1042)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc-----CCCceEEeecCCHHH
Confidence 4678999998 999999999999864200 001134899999999988887754 356789999999999
Q ss_pred HHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHH
Q 012947 82 LHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVM 161 (452)
Q Consensus 82 l~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~ 161 (452)
+.++++++|+||+|..+ .. ...++++|+++|+||++.+....- ...+++.|+++|+.+++.|||++.-..|.+.
T Consensus 642 L~~~v~~~DaVIsalP~-~~-H~~VAkaAieaGkHvv~eky~~~e----~~~L~e~Ak~AGV~~m~e~GlDPGid~~lA~ 715 (1042)
T PLN02819 642 LLKYVSQVDVVISLLPA-SC-HAVVAKACIELKKHLVTASYVSEE----MSALDSKAKEAGITILCEMGLDPGIDHMMAM 715 (1042)
T ss_pred HHHhhcCCCEEEECCCc-hh-hHHHHHHHHHcCCCEEECcCCHHH----HHHHHHHHHHcCCEEEECCccCHHHHHHHHH
Confidence 99999999999999954 33 379999999999999999844333 3566889999999999999999888777777
Q ss_pred HHhhhcCCCCCcceEEEEEE
Q 012947 162 FNSRQWIPPAVPNQIEAYVS 181 (452)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~ 181 (452)
.+.++.... ...+.++.+
T Consensus 716 ~~Id~~~~~--~GkI~s~~s 733 (1042)
T PLN02819 716 KMIDDAHER--GGKVKSFTS 733 (1042)
T ss_pred HHHHhhccc--CCcEEEEEE
Confidence 667666422 334444443
No 7
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=99.36 E-value=3.4e-12 Score=120.90 Aligned_cols=119 Identities=19% Similarity=0.150 Sum_probs=93.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
.-++|||||++||.++++.|++.| ++|++++|+.++|+++.+++.. ..+..+..|++|.++++++++
T Consensus 7 kv~lITGASSGiG~A~A~~l~~~G-------~~vvl~aRR~drL~~la~~~~~---~~~~~~~~DVtD~~~~~~~i~~~~ 76 (246)
T COG4221 7 KVALITGASSGIGEATARALAEAG-------AKVVLAARREERLEALADEIGA---GAALALALDVTDRAAVEAAIEALP 76 (246)
T ss_pred cEEEEecCcchHHHHHHHHHHHCC-------CeEEEEeccHHHHHHHHHhhcc---CceEEEeeccCCHHHHHHHHHHHH
Confidence 569999999999999999999999 8999999999999999999852 467889999999999777765
Q ss_pred ----CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEe--cCcHHHHHHHHHHHHHHHHhCcc
Q 012947 88 ----QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDI--SGEPEFMERMEARYHEKAVETGS 143 (452)
Q Consensus 88 ----~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDl--sge~~~~~~~~~~~~~~A~~~gv 143 (452)
++|++|||||.+.. .++.++-.+.+-..||+ .|-...++..++.+ .+++.|-
T Consensus 77 ~~~g~iDiLvNNAGl~~g--~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m--~~r~~G~ 134 (246)
T COG4221 77 EEFGRIDILVNNAGLALG--DPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGM--VERKSGH 134 (246)
T ss_pred HhhCcccEEEecCCCCcC--ChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHH--HhcCCce
Confidence 68999999997654 56666666665554444 45555556655444 4555663
No 8
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=99.32 E-value=1.3e-11 Score=122.29 Aligned_cols=87 Identities=22% Similarity=0.255 Sum_probs=74.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHH--HHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQ--ALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~--l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
....|+|||||||||++|++.|+++| ++|....|++++.+. .+.++.. ...++.++.+|+.|++++.+++
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rG-------Y~V~gtVR~~~~~k~~~~L~~l~~-a~~~l~l~~aDL~d~~sf~~ai 76 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRG-------YTVRGTVRDPEDEKKTEHLRKLEG-AKERLKLFKADLLDEGSFDKAI 76 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCC-------CEEEEEEcCcchhhhHHHHHhccc-CcccceEEeccccccchHHHHH
Confidence 34789999999999999999999999 999999999887444 3555542 2346899999999999999999
Q ss_pred cCccEEeecCCCCCCCC
Q 012947 87 SQTKLLLNCVGPYRLHG 103 (452)
Q Consensus 87 ~~~dvVIn~aGp~~~~~ 103 (452)
++||.|+|+|.|+....
T Consensus 77 ~gcdgVfH~Asp~~~~~ 93 (327)
T KOG1502|consen 77 DGCDGVFHTASPVDFDL 93 (327)
T ss_pred hCCCEEEEeCccCCCCC
Confidence 99999999999976643
No 9
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=99.29 E-value=2.9e-11 Score=117.94 Aligned_cols=147 Identities=17% Similarity=0.129 Sum_probs=108.2
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHH----HHHHHc
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPS----LHRLCS 87 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~s----l~~~~~ 87 (452)
=.+|+|||.+||+..+++|+++| ++|++++|+++||+++.+++......++.++.+|.++++. +.+.+.
T Consensus 51 WAVVTGaTDGIGKayA~eLAkrG-------~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~ 123 (312)
T KOG1014|consen 51 WAVVTGATDGIGKAYARELAKRG-------FNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLA 123 (312)
T ss_pred EEEEECCCCcchHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhc
Confidence 38999999999999999999999 8999999999999999999864233568899999987664 566666
Q ss_pred Cc--cEEeecCCCCCCCCHHHHHHHHH--hCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEE--cCCCCCcchhhHHHH
Q 012947 88 QT--KLLLNCVGPYRLHGDPVAAACVH--SGCDYLDISGEPEFMERMEARYHEKAVETGSLLV--SACGFDSIPAELGVM 161 (452)
Q Consensus 88 ~~--dvVIn~aGp~~~~~~~vv~ac~~--~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv--~~~G~~s~P~dl~~~ 161 (452)
+. -++|||+|....+.+...+.-.. ..+.-|++.+.....+.+.+.+. .+++|+++. ++.|..+.| .+.+|
T Consensus 124 ~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~--~r~~G~IvnigS~ag~~p~p-~~s~y 200 (312)
T KOG1014|consen 124 GLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMV--ERKKGIIVNIGSFAGLIPTP-LLSVY 200 (312)
T ss_pred CCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhh--cCCCceEEEeccccccccCh-hHHHH
Confidence 54 58999999877666666655442 23446666666667777665544 467787765 444554555 45667
Q ss_pred HHhhhcC
Q 012947 162 FNSRQWI 168 (452)
Q Consensus 162 ~~~~~~~ 168 (452)
.+.|.+-
T Consensus 201 sasK~~v 207 (312)
T KOG1014|consen 201 SASKAFV 207 (312)
T ss_pred HHHHHHH
Confidence 7776653
No 10
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.26 E-value=1.4e-11 Score=120.38 Aligned_cols=147 Identities=18% Similarity=0.199 Sum_probs=100.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCC-CccEEEEeCCCHHHHHHHHc
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSL-SIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~-~v~~v~~Dl~d~~sl~~~~~ 87 (452)
+...++|||||++||.++|.+|++.| .++++..|..++++.+.+++...... ++.++.+|++|.+++.++++
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G-------~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~ 83 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRG-------AKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVE 83 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCC-------CceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHH
Confidence 45679999999999999999999999 78888888888887776666431122 58899999999999997764
Q ss_pred -------CccEEeecCCCCCCCCHHHHHHHHH--hCCcEEEecCcHHHHHHHHHHHHHHHHhCccE-EEcCCCCCcchhh
Q 012947 88 -------QTKLLLNCVGPYRLHGDPVAAACVH--SGCDYLDISGEPEFMERMEARYHEKAVETGSL-LVSACGFDSIPAE 157 (452)
Q Consensus 88 -------~~dvVIn~aGp~~~~~~~vv~ac~~--~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~-iv~~~G~~s~P~d 157 (452)
+.|++|||||... .+ .+...-.+ ..+--+|+-|....++..++.+.++- ...+. |-|.+|..+.|..
T Consensus 84 ~~~~~fg~vDvLVNNAG~~~-~~-~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-~GhIVvisSiaG~~~~P~~ 160 (282)
T KOG1205|consen 84 WAIRHFGRVDVLVNNAGISL-VG-FLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-DGHIVVISSIAGKMPLPFR 160 (282)
T ss_pred HHHHhcCCCCEEEecCcccc-cc-ccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-CCeEEEEeccccccCCCcc
Confidence 6899999999755 22 11111111 11223455577788888776665443 12233 3366788888853
Q ss_pred HHHHHHhhh
Q 012947 158 LGVMFNSRQ 166 (452)
Q Consensus 158 l~~~~~~~~ 166 (452)
.+|.++|+
T Consensus 161 -~~Y~ASK~ 168 (282)
T KOG1205|consen 161 -SIYSASKH 168 (282)
T ss_pred -cccchHHH
Confidence 24444444
No 11
>CHL00194 ycf39 Ycf39; Provisional
Probab=99.21 E-value=1.1e-10 Score=116.94 Aligned_cols=98 Identities=15% Similarity=0.171 Sum_probs=79.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
|+|+|+|||||+|++++++|+++| ++|.+..|+.++.+.+. ..+++++.+|++|++++.++++++|
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g-------~~V~~l~R~~~~~~~l~-------~~~v~~v~~Dl~d~~~l~~al~g~d 66 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEG-------YQVRCLVRNLRKASFLK-------EWGAELVYGDLSLPETLPPSFKGVT 66 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-------CeEEEEEcChHHhhhHh-------hcCCEEEECCCCCHHHHHHHHCCCC
Confidence 479999999999999999999998 89999999987654332 1367899999999999999999999
Q ss_pred EEeecCCCCCCC-----------CHHHHHHHHHhCC-cEEEecC
Q 012947 91 LLLNCVGPYRLH-----------GDPVAAACVHSGC-DYLDISG 122 (452)
Q Consensus 91 vVIn~aGp~~~~-----------~~~vv~ac~~~g~-~yvDlsg 122 (452)
+|||+++..... ..+++++|.+.|+ ++|.+++
T Consensus 67 ~Vi~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss 110 (317)
T CHL00194 67 AIIDASTSRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSI 110 (317)
T ss_pred EEEECCCCCCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEecc
Confidence 999998743211 1467788888887 5666654
No 12
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=99.17 E-value=1.7e-10 Score=105.89 Aligned_cols=73 Identities=22% Similarity=0.464 Sum_probs=66.9
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCccEE
Q 012947 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKLL 92 (452)
Q Consensus 13 ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~dvV 92 (452)
|+|+||||++|+.++++|++++ ++|.+..|+++++++ ..+++++.+|+.|++++.++++++|+|
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~-------~~V~~~~R~~~~~~~---------~~~~~~~~~d~~d~~~~~~al~~~d~v 64 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRG-------HEVTALVRSPSKAED---------SPGVEIIQGDLFDPDSVKAALKGADAV 64 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT-------SEEEEEESSGGGHHH---------CTTEEEEESCTTCHHHHHHHHTTSSEE
T ss_pred eEEECCCChHHHHHHHHHHHCC-------CEEEEEecCchhccc---------ccccccceeeehhhhhhhhhhhhcchh
Confidence 7999999999999999999998 899999999999876 147899999999999999999999999
Q ss_pred eecCCCCCC
Q 012947 93 LNCVGPYRL 101 (452)
Q Consensus 93 In~aGp~~~ 101 (452)
|+++|+...
T Consensus 65 i~~~~~~~~ 73 (183)
T PF13460_consen 65 IHAAGPPPK 73 (183)
T ss_dssp EECCHSTTT
T ss_pred hhhhhhhcc
Confidence 999986543
No 13
>PRK06194 hypothetical protein; Provisional
Probab=99.16 E-value=1.4e-10 Score=114.02 Aligned_cols=115 Identities=16% Similarity=0.038 Sum_probs=83.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..+++|+||+|+||++++++|+++| ++|++++|+.+++++..+++.. ...++.++.+|++|.++++++++
T Consensus 6 ~k~vlVtGasggIG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~ 77 (287)
T PRK06194 6 GKVAVITGAASGFGLAFARIGAALG-------MKLVLADVQQDALDRAVAELRA-QGAEVLGVRTDVSDAAQVEALADAA 77 (287)
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCC-------CEEEEEeCChHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 7999999999888877776632 12356778999999999998887
Q ss_pred -----CccEEeecCCCCCCC-----CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHH
Q 012947 88 -----QTKLLLNCVGPYRLH-----GDPVAAACVHSGCDYLDISGEPEFMERMEARYHEK 137 (452)
Q Consensus 88 -----~~dvVIn~aGp~~~~-----~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~ 137 (452)
+.|+||||||..... ...-.+. ...+++.|...+++...+.+.+.
T Consensus 78 ~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~-----~~~~N~~g~~~~~~~~~~~~~~~ 132 (287)
T PRK06194 78 LERFGAVHLLFNNAGVGAGGLVWENSLADWEW-----VLGVNLWGVIHGVRAFTPLMLAA 132 (287)
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHH-----HHhhccHHHHHHHHHHHHHHHhc
Confidence 469999999965321 1111111 12345556566666655544443
No 14
>PRK06139 short chain dehydrogenase; Provisional
Probab=99.16 E-value=1.1e-10 Score=118.00 Aligned_cols=82 Identities=21% Similarity=0.220 Sum_probs=70.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||||+||+.+++.|+++| ++|++++|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 7 ~k~vlITGAs~GIG~aia~~la~~G-------~~Vvl~~R~~~~l~~~~~~~~~-~g~~~~~~~~Dv~d~~~v~~~~~~~ 78 (330)
T PRK06139 7 GAVVVITGASSGIGQATAEAFARRG-------ARLVLAARDEEALQAVAEECRA-LGAEVLVVPTDVTDADQVKALATQA 78 (330)
T ss_pred CCEEEEcCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEeeCCCHHHHHHHHHHH
Confidence 4589999999999999999999998 8999999999999888776632 23456788999999999998874
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
++|++|||||..
T Consensus 79 ~~~~g~iD~lVnnAG~~ 95 (330)
T PRK06139 79 ASFGGRIDVWVNNVGVG 95 (330)
T ss_pred HHhcCCCCEEEECCCcC
Confidence 579999999853
No 15
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.15 E-value=2.9e-10 Score=110.64 Aligned_cols=132 Identities=16% Similarity=0.066 Sum_probs=105.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++||||++++|++++.++++++ .++++++.|.+..++.++++.. .+++....||++|.+++.+..+
T Consensus 38 g~~vLITGgg~GlGr~ialefa~rg-------~~~vl~Din~~~~~etv~~~~~--~g~~~~y~cdis~~eei~~~a~~V 108 (300)
T KOG1201|consen 38 GEIVLITGGGSGLGRLIALEFAKRG-------AKLVLWDINKQGNEETVKEIRK--IGEAKAYTCDISDREEIYRLAKKV 108 (300)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHhC-------CeEEEEeccccchHHHHHHHHh--cCceeEEEecCCCHHHHHHHHHHH
Confidence 4569999999999999999999999 7999999999998888888752 2468899999999999887766
Q ss_pred -----CccEEeecCCCCCC-----CCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcch
Q 012947 88 -----QTKLLLNCVGPYRL-----HGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIP 155 (452)
Q Consensus 88 -----~~dvVIn~aGp~~~-----~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P 155 (452)
.+|++|||||.... ..+..++-|.+ |++.+....++.+.+.+.+.-+..-|.|-|.+|..+.|
T Consensus 109 k~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~-----vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~ 181 (300)
T KOG1201|consen 109 KKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFD-----VNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPA 181 (300)
T ss_pred HHhcCCceEEEeccccccCCCccCCCHHHHHHHHH-----HhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCc
Confidence 57999999996433 33667777776 56667677778888877766555556677888887766
No 16
>PLN02427 UDP-apiose/xylose synthase
Probab=99.14 E-value=3.6e-10 Score=116.39 Aligned_cols=89 Identities=15% Similarity=0.179 Sum_probs=69.8
Q ss_pred CCCCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 012947 5 SQIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (452)
Q Consensus 5 ~~~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~ 84 (452)
.+..++++|+|||||||+|+++++.|++++. ++|.+++|+.++.+.+..........+++++.+|+.|.+.+.+
T Consensus 9 ~~~~~~~~VlVTGgtGfIGs~lv~~L~~~~g------~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~ 82 (386)
T PLN02427 9 GKPIKPLTICMIGAGGFIGSHLCEKLMTETP------HKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEG 82 (386)
T ss_pred CCcccCcEEEEECCcchHHHHHHHHHHhcCC------CEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHH
Confidence 3445678999999999999999999999841 6899899987776554321100012368899999999999999
Q ss_pred HHcCccEEeecCCCC
Q 012947 85 LCSQTKLLLNCVGPY 99 (452)
Q Consensus 85 ~~~~~dvVIn~aGp~ 99 (452)
+++++|+|||+|+..
T Consensus 83 ~~~~~d~ViHlAa~~ 97 (386)
T PLN02427 83 LIKMADLTINLAAIC 97 (386)
T ss_pred HhhcCCEEEEccccc
Confidence 999999999999853
No 17
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=99.13 E-value=3e-10 Score=110.23 Aligned_cols=80 Identities=24% Similarity=0.250 Sum_probs=69.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
++++|+||+|++|+.++++|+++| ++|++.+|+.++++++.+++.. ..++.++.+|++|+++++++++
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~Dv~d~~~~~~~~~~~~ 71 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKG-------ARVVISSRNEENLEKALKELKE--YGEVYAVKADLSDKDDLKNLVKEAW 71 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHh--cCCceEEEcCCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 8999999999998888777742 2357789999999999988775
Q ss_pred ----CccEEeecCCCC
Q 012947 88 ----QTKLLLNCVGPY 99 (452)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (452)
+.|+||||+|..
T Consensus 72 ~~~g~id~li~naG~~ 87 (259)
T PRK08340 72 ELLGGIDALVWNAGNV 87 (259)
T ss_pred HhcCCCCEEEECCCCC
Confidence 579999999964
No 18
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=99.13 E-value=2.1e-10 Score=105.50 Aligned_cols=129 Identities=16% Similarity=0.206 Sum_probs=93.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
-.|+|+||+.+||..+++.+.+.| -+|+++||++++|++..++. +.+...+||+.|.++++++++
T Consensus 6 nTiLITGG~sGIGl~lak~f~elg-------N~VIi~gR~e~~L~e~~~~~-----p~~~t~v~Dv~d~~~~~~lvewLk 73 (245)
T COG3967 6 NTILITGGASGIGLALAKRFLELG-------NTVIICGRNEERLAEAKAEN-----PEIHTEVCDVADRDSRRELVEWLK 73 (245)
T ss_pred cEEEEeCCcchhhHHHHHHHHHhC-------CEEEEecCcHHHHHHHHhcC-----cchheeeecccchhhHHHHHHHHH
Confidence 369999999999999999999998 59999999999999988754 578889999999999888876
Q ss_pred ----CccEEeecCCCCCCCC----HHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcch
Q 012947 88 ----QTKLLLNCVGPYRLHG----DPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIP 155 (452)
Q Consensus 88 ----~~dvVIn~aGp~~~~~----~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P 155 (452)
+.++||||||...... +...+...+ ...+++.+....+..+++.+-. +....+|--|+|..-+|
T Consensus 74 k~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~--eI~~Nl~API~Lt~~~lphl~~--q~~a~IInVSSGLafvP 145 (245)
T COG3967 74 KEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQ--EIATNLLAPIRLTALLLPHLLR--QPEATIINVSSGLAFVP 145 (245)
T ss_pred hhCCchheeeecccccchhhccCCcchhhHHHH--HHHHhhhhHHHHHHHHHHHHHh--CCCceEEEeccccccCc
Confidence 5699999999754432 222222111 1234566777777777654433 22333444555665565
No 19
>PRK05876 short chain dehydrogenase; Provisional
Probab=99.12 E-value=2e-10 Score=112.98 Aligned_cols=82 Identities=12% Similarity=0.138 Sum_probs=69.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~- 88 (452)
...++|+||+|++|+++++.|+++| ++|++++|+.++++++.+++.. ...++.++.+|++|++++.+++++
T Consensus 6 ~k~vlVTGas~gIG~ala~~La~~G-------~~Vv~~~r~~~~l~~~~~~l~~-~~~~~~~~~~Dv~d~~~v~~~~~~~ 77 (275)
T PRK05876 6 GRGAVITGGASGIGLATGTEFARRG-------ARVVLGDVDKPGLRQAVNHLRA-EGFDVHGVMCDVRHREEVTHLADEA 77 (275)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEeCCCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 7999999999998888777642 123567889999999999888764
Q ss_pred ------ccEEeecCCCC
Q 012947 89 ------TKLLLNCVGPY 99 (452)
Q Consensus 89 ------~dvVIn~aGp~ 99 (452)
+|+||||||..
T Consensus 78 ~~~~g~id~li~nAg~~ 94 (275)
T PRK05876 78 FRLLGHVDVVFSNAGIV 94 (275)
T ss_pred HHHcCCCCEEEECCCcC
Confidence 69999999853
No 20
>PRK05867 short chain dehydrogenase; Provisional
Probab=99.12 E-value=3.3e-10 Score=109.41 Aligned_cols=83 Identities=14% Similarity=0.099 Sum_probs=70.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|+||+.+++.|+++| ++|++.+|+.++++++.+++.. ...++..+.+|++|+++++++++
T Consensus 9 ~k~vlVtGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (253)
T PRK05867 9 GKRALITGASTGIGKRVALAYVEAG-------AQVAIAARHLDALEKLADEIGT-SGGKVVPVCCDVSQHQQVTSMLDQV 80 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEcCCHHHHHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHHHH
Confidence 4579999999999999999999998 7999999999998888777642 12456788999999999988775
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
++|+||||+|...
T Consensus 81 ~~~~g~id~lv~~ag~~~ 98 (253)
T PRK05867 81 TAELGGIDIAVCNAGIIT 98 (253)
T ss_pred HHHhCCCCEEEECCCCCC
Confidence 6799999999754
No 21
>PRK08339 short chain dehydrogenase; Provisional
Probab=99.12 E-value=2.4e-10 Score=111.54 Aligned_cols=82 Identities=18% Similarity=0.156 Sum_probs=69.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++|+||+|+||+.+++.|+++| ++|++.+|+.++++++.+++......++.++.+|++|+++++++++
T Consensus 9 k~~lItGas~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~ 81 (263)
T PRK08339 9 KLAFTTASSKGIGFGVARVLARAG-------ADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK 81 (263)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 8999999999998887776632112467889999999999988876
Q ss_pred ---CccEEeecCCCC
Q 012947 88 ---QTKLLLNCVGPY 99 (452)
Q Consensus 88 ---~~dvVIn~aGp~ 99 (452)
+.|++|||+|..
T Consensus 82 ~~g~iD~lv~nag~~ 96 (263)
T PRK08339 82 NIGEPDIFFFSTGGP 96 (263)
T ss_pred hhCCCcEEEECCCCC
Confidence 479999999864
No 22
>PRK07109 short chain dehydrogenase; Provisional
Probab=99.10 E-value=3.3e-10 Score=114.63 Aligned_cols=82 Identities=16% Similarity=0.078 Sum_probs=70.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||||++|+.++++|+++| ++|++++|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 8 ~k~vlITGas~gIG~~la~~la~~G-------~~Vvl~~R~~~~l~~~~~~l~~-~g~~~~~v~~Dv~d~~~v~~~~~~~ 79 (334)
T PRK07109 8 RQVVVITGASAGVGRATARAFARRG-------AKVVLLARGEEGLEALAAEIRA-AGGEALAVVADVADAEAVQAAADRA 79 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHH-cCCcEEEEEecCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 7999999999998887776632 23467788999999999988765
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
++|++|||+|..
T Consensus 80 ~~~~g~iD~lInnAg~~ 96 (334)
T PRK07109 80 EEELGPIDTWVNNAMVT 96 (334)
T ss_pred HHHCCCCCEEEECCCcC
Confidence 579999999864
No 23
>PRK07024 short chain dehydrogenase; Provisional
Probab=99.09 E-value=3e-10 Score=110.08 Aligned_cols=81 Identities=20% Similarity=0.262 Sum_probs=69.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~-- 88 (452)
.+++|+||+|++|+.++++|+++| ++|++.+|+.++++++.+++.. ..++.++.+|++|++++.+++++
T Consensus 3 ~~vlItGas~gIG~~la~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~ 73 (257)
T PRK07024 3 LKVFITGASSGIGQALAREYARQG-------ATLGLVARRTDALQAFAARLPK--AARVSVYAADVRDADALAAAAADFI 73 (257)
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHhccc--CCeeEEEEcCCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 7999999999998887776642 12678899999999999887764
Q ss_pred -----ccEEeecCCCCC
Q 012947 89 -----TKLLLNCVGPYR 100 (452)
Q Consensus 89 -----~dvVIn~aGp~~ 100 (452)
.|+||||+|...
T Consensus 74 ~~~g~id~lv~~ag~~~ 90 (257)
T PRK07024 74 AAHGLPDVVIANAGISV 90 (257)
T ss_pred HhCCCCCEEEECCCcCC
Confidence 699999999643
No 24
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.08 E-value=5.9e-10 Score=107.74 Aligned_cols=82 Identities=15% Similarity=0.091 Sum_probs=69.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~- 88 (452)
...++|+||||++|+.++++|+++| ++|++.+|++++++++.+++.. ...++.++.+|++|++++++++++
T Consensus 7 ~~~vlItGasg~iG~~la~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~ 78 (262)
T PRK13394 7 GKTAVVTGAASGIGKEIALELARAG-------AAVAIADLNQDGANAVADEINK-AGGKAIGVAMDVTNEDAVNAGIDKV 78 (262)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-------CeEEEEeCChHHHHHHHHHHHh-cCceEEEEECCCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 7999999999888887776642 123567889999999999887764
Q ss_pred ------ccEEeecCCCC
Q 012947 89 ------TKLLLNCVGPY 99 (452)
Q Consensus 89 ------~dvVIn~aGp~ 99 (452)
+|+||||+|..
T Consensus 79 ~~~~~~~d~vi~~ag~~ 95 (262)
T PRK13394 79 AERFGSVDILVSNAGIQ 95 (262)
T ss_pred HHHcCCCCEEEECCccC
Confidence 79999999864
No 25
>PLN02214 cinnamoyl-CoA reductase
Probab=99.07 E-value=1.3e-09 Score=110.57 Aligned_cols=84 Identities=19% Similarity=0.190 Sum_probs=67.2
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHH-HHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQ-ALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~-l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
+..+|+|+|||||+|++++++|+++| ++|.+.+|+.++... ....+.. ...++.++.+|+.|++++.++++
T Consensus 9 ~~~~vlVTGatGfIG~~l~~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~ 80 (342)
T PLN02214 9 AGKTVCVTGAGGYIASWIVKILLERG-------YTVKGTVRNPDDPKNTHLRELEG-GKERLILCKADLQDYEALKAAID 80 (342)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCc-------CEEEEEeCCchhhhHHHHHHhhC-CCCcEEEEecCcCChHHHHHHHh
Confidence 44689999999999999999999998 799999998765322 1222211 11357788999999999999999
Q ss_pred CccEEeecCCCCC
Q 012947 88 QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ~~dvVIn~aGp~~ 100 (452)
++|+|||+|++..
T Consensus 81 ~~d~Vih~A~~~~ 93 (342)
T PLN02214 81 GCDGVFHTASPVT 93 (342)
T ss_pred cCCEEEEecCCCC
Confidence 9999999999864
No 26
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=99.07 E-value=1.4e-09 Score=115.85 Aligned_cols=107 Identities=18% Similarity=0.260 Sum_probs=85.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC--------CCCCCccEEEEeCCCHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--------SHSLSIPILTADTTDPP 80 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~--------~~~~~v~~v~~Dl~d~~ 80 (452)
....|+|+||+|+||++++++|++.| ++|++++|+.++++.+.+.+.. ....++.++.+|+.|.+
T Consensus 79 ~gKvVLVTGATGgIG~aLAr~LLk~G-------~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~e 151 (576)
T PLN03209 79 DEDLAFVAGATGKVGSRTVRELLKLG-------FRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPD 151 (576)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC-------CeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHH
Confidence 34579999999999999999999998 8999999999998777654421 00135788999999999
Q ss_pred HHHHHHcCccEEeecCCCCCCC--------------CHHHHHHHHHhCC-cEEEecC
Q 012947 81 SLHRLCSQTKLLLNCVGPYRLH--------------GDPVAAACVHSGC-DYLDISG 122 (452)
Q Consensus 81 sl~~~~~~~dvVIn~aGp~~~~--------------~~~vv~ac~~~g~-~yvDlsg 122 (452)
++.+++.++|+||||+|..... ..+++++|.+.++ ++|.++.
T Consensus 152 sI~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSS 208 (576)
T PLN03209 152 QIGPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTS 208 (576)
T ss_pred HHHHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEcc
Confidence 9999999999999999864210 1567888888876 6777764
No 27
>PRK07825 short chain dehydrogenase; Provisional
Probab=99.07 E-value=4e-10 Score=110.12 Aligned_cols=77 Identities=21% Similarity=0.151 Sum_probs=66.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++|+||||++|+.++++|+++| ++|++.+|+.++++++.+++. ++.++.+|++|+++++++++
T Consensus 6 ~~ilVtGasggiG~~la~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~ 73 (273)
T PRK07825 6 KVVAITGGARGIGLATARALAALG-------ARVAIGDLDEALAKETAAELG-----LVVGGPLDVTDPASFAAFLDAVE 73 (273)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHhc-----cceEEEccCCCHHHHHHHHHHHH
Confidence 579999999999999999999998 799999999999988777652 46788999999999877665
Q ss_pred ----CccEEeecCCCC
Q 012947 88 ----QTKLLLNCVGPY 99 (452)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (452)
.+|+||||+|..
T Consensus 74 ~~~~~id~li~~ag~~ 89 (273)
T PRK07825 74 ADLGPIDVLVNNAGVM 89 (273)
T ss_pred HHcCCCCEEEECCCcC
Confidence 469999999964
No 28
>PRK07063 short chain dehydrogenase; Provisional
Probab=99.06 E-value=6.8e-10 Score=107.59 Aligned_cols=83 Identities=19% Similarity=0.161 Sum_probs=70.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~-~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++|+||+|+||+.+++.|+++| ++|++.+|+.++++++.+++... ...++.++.+|++|++++.++++
T Consensus 7 ~k~vlVtGas~gIG~~~a~~l~~~G-------~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 79 (260)
T PRK07063 7 GKVALVTGAAQGIGAAIARAFAREG-------AAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAA 79 (260)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHH
Confidence 4579999999999999999999998 79999999999988887776420 12457788999999999988876
Q ss_pred ------CccEEeecCCCC
Q 012947 88 ------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (452)
+.|+||||+|..
T Consensus 80 ~~~~~g~id~li~~ag~~ 97 (260)
T PRK07063 80 AEEAFGPLDVLVNNAGIN 97 (260)
T ss_pred HHHHhCCCcEEEECCCcC
Confidence 589999999964
No 29
>PRK07814 short chain dehydrogenase; Provisional
Probab=99.06 E-value=1.4e-09 Score=105.89 Aligned_cols=82 Identities=15% Similarity=0.174 Sum_probs=69.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|++|++++++|+++| ++|++++|+.++++++.+.+.. ...++.++.+|++|++++.++++
T Consensus 10 ~~~vlItGasggIG~~~a~~l~~~G-------~~Vi~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 81 (263)
T PRK07814 10 DQVAVVTGAGRGLGAAIALAFAEAG-------ADVLIAARTESQLDEVAEQIRA-AGRRAHVVAADLAHPEATAGLAGQA 81 (263)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHH
Confidence 4679999999999999999999998 8999999999888877766532 12457788999999999987766
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
++|+|||+||..
T Consensus 82 ~~~~~~id~vi~~Ag~~ 98 (263)
T PRK07814 82 VEAFGRLDIVVNNVGGT 98 (263)
T ss_pred HHHcCCCCEEEECCCCC
Confidence 579999999853
No 30
>PRK05717 oxidoreductase; Validated
Probab=99.05 E-value=7.4e-10 Score=107.10 Aligned_cols=89 Identities=11% Similarity=-0.023 Sum_probs=71.4
Q ss_pred CCCCCCCCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHH
Q 012947 1 MQAQSQIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPP 80 (452)
Q Consensus 1 ~~~~~~~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~ 80 (452)
|..|.-......++|+||+|+||+.++++|+++| .+|++++|+.++.+++.+++. .++.++.+|++|++
T Consensus 1 ~~~~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g-------~~v~~~~~~~~~~~~~~~~~~----~~~~~~~~Dl~~~~ 69 (255)
T PRK05717 1 MSEPNPGHNGRVALVTGAARGIGLGIAAWLIAEG-------WQVVLADLDRERGSKVAKALG----ENAWFIAMDVADEA 69 (255)
T ss_pred CCCCCcccCCCEEEEeCCcchHHHHHHHHHHHcC-------CEEEEEcCCHHHHHHHHHHcC----CceEEEEccCCCHH
Confidence 3444444455689999999999999999999998 799999999888877666552 35778999999999
Q ss_pred HHHHHHc-------CccEEeecCCCCC
Q 012947 81 SLHRLCS-------QTKLLLNCVGPYR 100 (452)
Q Consensus 81 sl~~~~~-------~~dvVIn~aGp~~ 100 (452)
++.++++ ++|+||||+|...
T Consensus 70 ~~~~~~~~~~~~~g~id~li~~ag~~~ 96 (255)
T PRK05717 70 QVAAGVAEVLGQFGRLDALVCNAAIAD 96 (255)
T ss_pred HHHHHHHHHHHHhCCCCEEEECCCccc
Confidence 8876654 3699999998643
No 31
>PRK08267 short chain dehydrogenase; Provisional
Probab=99.05 E-value=4.4e-10 Score=108.93 Aligned_cols=79 Identities=15% Similarity=0.032 Sum_probs=68.6
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc----
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~---- 87 (452)
+++|+||||++|+.++++|+++| ++|.+.+|+.++++++.+.+. ..++.++.+|++|.+++.++++
T Consensus 3 ~vlItGasg~iG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~ 72 (260)
T PRK08267 3 SIFITGAASGIGRATALLFAAEG-------WRVGAYDINEAGLAALAAELG---AGNAWTGALDVTDRAAWDAALADFAA 72 (260)
T ss_pred EEEEeCCCchHHHHHHHHHHHCC-------CeEEEEeCCHHHHHHHHHHhc---CCceEEEEecCCCHHHHHHHHHHHHH
Confidence 69999999999999999999998 799999999999988877653 3467899999999999888765
Q ss_pred ----CccEEeecCCCCC
Q 012947 88 ----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (452)
+.|+||||+|...
T Consensus 73 ~~~~~id~vi~~ag~~~ 89 (260)
T PRK08267 73 ATGGRLDVLFNNAGILR 89 (260)
T ss_pred HcCCCCCEEEECCCCCC
Confidence 3599999999643
No 32
>PRK06182 short chain dehydrogenase; Validated
Probab=99.05 E-value=8.9e-10 Score=107.72 Aligned_cols=76 Identities=22% Similarity=0.208 Sum_probs=66.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++|+||+|++|+.++++|+++| ++|++.+|+.++++++.+ .++.++.+|++|+++++++++
T Consensus 4 k~vlItGasggiG~~la~~l~~~G-------~~V~~~~r~~~~l~~~~~-------~~~~~~~~Dv~~~~~~~~~~~~~~ 69 (273)
T PRK06182 4 KVALVTGASSGIGKATARRLAAQG-------YTVYGAARRVDKMEDLAS-------LGVHPLSLDVTDEASIKAAVDTII 69 (273)
T ss_pred CEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHh-------CCCeEEEeeCCCHHHHHHHHHHHH
Confidence 579999999999999999999988 799999999988866543 247889999999999988887
Q ss_pred ----CccEEeecCCCCC
Q 012947 88 ----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (452)
++|+||||+|...
T Consensus 70 ~~~~~id~li~~ag~~~ 86 (273)
T PRK06182 70 AEEGRIDVLVNNAGYGS 86 (273)
T ss_pred HhcCCCCEEEECCCcCC
Confidence 6899999999643
No 33
>PRK05872 short chain dehydrogenase; Provisional
Probab=99.05 E-value=1.3e-09 Score=108.22 Aligned_cols=82 Identities=16% Similarity=0.086 Sum_probs=69.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|++|+.++++|+++| ++|++.+|+.++++++.++++. ...+..+.+|++|+++++++++
T Consensus 9 gk~vlItGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~l~~~~~~l~~--~~~~~~~~~Dv~d~~~v~~~~~~~ 79 (296)
T PRK05872 9 GKVVVVTGAARGIGAELARRLHARG-------AKLALVDLEEAELAALAAELGG--DDRVLTVVADVTDLAAMQAAAEEA 79 (296)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhcC--CCcEEEEEecCCCHHHHHHHHHHH
Confidence 4689999999999999999999998 7999999999999988887742 2345566799999999988765
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
..|+||||+|...
T Consensus 80 ~~~~g~id~vI~nAG~~~ 97 (296)
T PRK05872 80 VERFGGIDVVVANAGIAS 97 (296)
T ss_pred HHHcCCCCEEEECCCcCC
Confidence 4799999999643
No 34
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=99.04 E-value=1.2e-09 Score=105.76 Aligned_cols=79 Identities=19% Similarity=0.194 Sum_probs=69.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|++|+.++++|+++| ++|++++|+.++++++.+++. .++.++.+|++|+++++++++
T Consensus 6 ~~~vlItGas~~iG~~ia~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~ 74 (257)
T PRK07067 6 GKVALLTGAASGIGEAVAERYLAEG-------ARVVIADIKPARARLAALEIG----PAAIAVSLDVTRQDSIDRIVAAA 74 (257)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcC-------CEEEEEcCCHHHHHHHHHHhC----CceEEEEccCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 899999999999888877653 357788999999999988876
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
+.|+||||+|..
T Consensus 75 ~~~~~~id~li~~ag~~ 91 (257)
T PRK07067 75 VERFGGIDILFNNAALF 91 (257)
T ss_pred HHHcCCCCEEEECCCcC
Confidence 479999999864
No 35
>PRK06179 short chain dehydrogenase; Provisional
Probab=99.04 E-value=3.9e-10 Score=109.92 Aligned_cols=75 Identities=21% Similarity=0.221 Sum_probs=64.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~- 88 (452)
...++|+||||++|+.++++|+++| ++|++.+|+.++++. ..++.++.+|++|++++++++++
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g-------~~V~~~~r~~~~~~~---------~~~~~~~~~D~~d~~~~~~~~~~~ 67 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAG-------YRVFGTSRNPARAAP---------IPGVELLELDVTDDASVQAAVDEV 67 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCC-------CEEEEEeCChhhccc---------cCCCeeEEeecCCHHHHHHHHHHH
Confidence 3579999999999999999999998 799999999876532 23578899999999999998874
Q ss_pred ------ccEEeecCCCCC
Q 012947 89 ------TKLLLNCVGPYR 100 (452)
Q Consensus 89 ------~dvVIn~aGp~~ 100 (452)
.|+||||+|...
T Consensus 68 ~~~~g~~d~li~~ag~~~ 85 (270)
T PRK06179 68 IARAGRIDVLVNNAGVGL 85 (270)
T ss_pred HHhCCCCCEEEECCCCCC
Confidence 699999999753
No 36
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.04 E-value=8.7e-10 Score=108.95 Aligned_cols=79 Identities=27% Similarity=0.352 Sum_probs=62.0
Q ss_pred EEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHH-HHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCccEE
Q 012947 14 IILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVK-QALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKLL 92 (452)
Q Consensus 14 lV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~-~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~dvV 92 (452)
|||||+||+|++++++|+++++ ..+|.+.+|+..... ..... .....++.+|++|++++.++++++|+|
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~-----~~~Vr~~d~~~~~~~~~~~~~-----~~~~~~~~~Di~d~~~l~~a~~g~d~V 70 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGY-----IYEVRVLDRSPPPKFLKDLQK-----SGVKEYIQGDITDPESLEEALEGVDVV 70 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCC-----ceEEEEcccccccccchhhhc-----ccceeEEEeccccHHHHHHHhcCCceE
Confidence 6999999999999999999983 268888888765432 11121 122348999999999999999999999
Q ss_pred eecCCCCCCC
Q 012947 93 LNCVGPYRLH 102 (452)
Q Consensus 93 In~aGp~~~~ 102 (452)
||+|++....
T Consensus 71 ~H~Aa~~~~~ 80 (280)
T PF01073_consen 71 FHTAAPVPPW 80 (280)
T ss_pred EEeCcccccc
Confidence 9999876443
No 37
>PRK05599 hypothetical protein; Provisional
Probab=99.04 E-value=6.3e-10 Score=107.43 Aligned_cols=82 Identities=17% Similarity=0.199 Sum_probs=67.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
+.++|+||++++|+.++++|+ ++ .+|++++|+.++++++.+++.......+.++.+|++|+++++++++
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g-------~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 72 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HG-------EDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQ 72 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CC-------CEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHH
Confidence 368999999999999999998 47 7999999999999988877742111246788999999999887765
Q ss_pred ----CccEEeecCCCCC
Q 012947 88 ----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (452)
+.|++|||+|.+.
T Consensus 73 ~~~g~id~lv~nag~~~ 89 (246)
T PRK05599 73 ELAGEISLAVVAFGILG 89 (246)
T ss_pred HhcCCCCEEEEecCcCC
Confidence 4799999999753
No 38
>PRK06180 short chain dehydrogenase; Provisional
Probab=99.04 E-value=7.2e-10 Score=108.76 Aligned_cols=78 Identities=17% Similarity=0.063 Sum_probs=67.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++|+||+|++|++++++|+++| ++|++++|+.++++.+.+.. ..++..+.+|++|++++.++++
T Consensus 5 ~~vlVtGasggiG~~la~~l~~~G-------~~V~~~~r~~~~~~~l~~~~----~~~~~~~~~D~~d~~~~~~~~~~~~ 73 (277)
T PRK06180 5 KTWLITGVSSGFGRALAQAALAAG-------HRVVGTVRSEAARADFEALH----PDRALARLLDVTDFDAIDAVVADAE 73 (277)
T ss_pred CEEEEecCCChHHHHHHHHHHhCc-------CEEEEEeCCHHHHHHHHhhc----CCCeeEEEccCCCHHHHHHHHHHHH
Confidence 469999999999999999999998 79999999999887766543 2467788999999999988877
Q ss_pred ----CccEEeecCCCC
Q 012947 88 ----QTKLLLNCVGPY 99 (452)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (452)
++|+||||+|..
T Consensus 74 ~~~~~~d~vv~~ag~~ 89 (277)
T PRK06180 74 ATFGPIDVLVNNAGYG 89 (277)
T ss_pred HHhCCCCEEEECCCcc
Confidence 479999999964
No 39
>PRK08251 short chain dehydrogenase; Provisional
Probab=99.04 E-value=7.3e-10 Score=106.41 Aligned_cols=82 Identities=18% Similarity=0.192 Sum_probs=68.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHc--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~-~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..++|+||+|++|+.++++|++++ .+|++.+|+.++++++.+++... ...++.++.+|++|++++.++++
T Consensus 3 k~vlItGas~giG~~la~~l~~~g-------~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 75 (248)
T PRK08251 3 QKILITGASSGLGAGMAREFAAKG-------RDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEF 75 (248)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHH
Confidence 479999999999999999999998 79999999999888776655321 13467888999999999887766
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
++|+||||+|..
T Consensus 76 ~~~~~~id~vi~~ag~~ 92 (248)
T PRK08251 76 RDELGGLDRVIVNAGIG 92 (248)
T ss_pred HHHcCCCCEEEECCCcC
Confidence 579999999854
No 40
>PRK07478 short chain dehydrogenase; Provisional
Probab=99.03 E-value=8.5e-10 Score=106.52 Aligned_cols=82 Identities=17% Similarity=0.128 Sum_probs=70.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|++|+.++++|+++| ++|++++|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 6 ~k~~lItGas~giG~~ia~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 77 (254)
T PRK07478 6 GKVAIITGASSGIGRAAAKLFAREG-------AKVVVGARRQAELDQLVAEIRA-EGGEAVALAGDVRDEAYAKALVALA 77 (254)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 7999999999998888776642 12467788999999999988876
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
+.|+||||||..
T Consensus 78 ~~~~~~id~li~~ag~~ 94 (254)
T PRK07478 78 VERFGGLDIAFNNAGTL 94 (254)
T ss_pred HHhcCCCCEEEECCCCC
Confidence 579999999964
No 41
>PRK08643 acetoin reductase; Validated
Probab=99.03 E-value=8.4e-10 Score=106.61 Aligned_cols=81 Identities=15% Similarity=0.097 Sum_probs=68.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++|+||+|++|+.++++|+++| ++|++.+|+.++++++..++.. ...++.++.+|++|+++++++++
T Consensus 3 k~~lItGas~giG~~la~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~ 74 (256)
T PRK08643 3 KVALVTGAGQGIGFAIAKRLVEDG-------FKVAIVDYNEETAQAAADKLSK-DGGKAIAVKADVSDRDQVFAAVRQVV 74 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 379999999999999999999998 7999999999888777766632 12456788999999999888776
Q ss_pred ----CccEEeecCCCC
Q 012947 88 ----QTKLLLNCVGPY 99 (452)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (452)
++|+||||+|..
T Consensus 75 ~~~~~id~vi~~ag~~ 90 (256)
T PRK08643 75 DTFGDLNVVVNNAGVA 90 (256)
T ss_pred HHcCCCCEEEECCCCC
Confidence 479999999864
No 42
>PRK07454 short chain dehydrogenase; Provisional
Probab=99.03 E-value=1.2e-09 Score=104.58 Aligned_cols=82 Identities=20% Similarity=0.150 Sum_probs=69.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++|+||+|++|+.++++|+++| ++|++++|+.++++++.+++.. ...++.++.+|++|++++.++++
T Consensus 7 k~vlItG~sg~iG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~ 78 (241)
T PRK07454 7 PRALITGASSGIGKATALAFAKAG-------WDLALVARSQDALEALAAELRS-TGVKAAAYSIDLSNPEAIAPGIAELL 78 (241)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-CCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 579999999999999999999998 7999999999888777665532 12467789999999999888776
Q ss_pred ----CccEEeecCCCCC
Q 012947 88 ----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (452)
++|+||||+|...
T Consensus 79 ~~~~~id~lv~~ag~~~ 95 (241)
T PRK07454 79 EQFGCPDVLINNAGMAY 95 (241)
T ss_pred HHcCCCCEEEECCCccC
Confidence 4799999999653
No 43
>PRK08265 short chain dehydrogenase; Provisional
Probab=99.03 E-value=1e-09 Score=106.77 Aligned_cols=79 Identities=16% Similarity=0.198 Sum_probs=69.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||||++|+.++++|+++| ++|++.+|+.++++++.++++ .++.++.+|++|++++.++++
T Consensus 6 ~k~vlItGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~~~~~~~~~ 74 (261)
T PRK08265 6 GKVAIVTGGATLIGAAVARALVAAG-------ARVAIVDIDADNGAAVAASLG----ERARFIATDITDDAAIERAVATV 74 (261)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhC----CeeEEEEecCCCHHHHHHHHHHH
Confidence 3589999999999999999999998 899999999998888877653 467889999999999988776
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
..|+||||+|..
T Consensus 75 ~~~~g~id~lv~~ag~~ 91 (261)
T PRK08265 75 VARFGRVDILVNLACTY 91 (261)
T ss_pred HHHhCCCCEEEECCCCC
Confidence 469999999964
No 44
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=99.03 E-value=2.9e-09 Score=108.30 Aligned_cols=90 Identities=14% Similarity=0.204 Sum_probs=74.4
Q ss_pred CCCCCCCCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHH
Q 012947 1 MQAQSQIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPP 80 (452)
Q Consensus 1 ~~~~~~~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~ 80 (452)
|.........++|+|+||+||+|++++++|+++| ++|++.+|+.++.+.+...+. ...++.++.+|+.|.+
T Consensus 1 ~~~~~~~~~~~~vLVtG~~GfIG~~l~~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~ 71 (353)
T PLN02896 1 MELEGRESATGTYCVTGATGYIGSWLVKLLLQRG-------YTVHATLRDPAKSLHLLSKWK--EGDRLRLFRADLQEEG 71 (353)
T ss_pred CCccccccCCCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCChHHHHHHHHhhc--cCCeEEEEECCCCCHH
Confidence 3444455567899999999999999999999998 799999999887766655542 1245788999999999
Q ss_pred HHHHHHcCccEEeecCCCC
Q 012947 81 SLHRLCSQTKLLLNCVGPY 99 (452)
Q Consensus 81 sl~~~~~~~dvVIn~aGp~ 99 (452)
.+.++++++|+|||+|+..
T Consensus 72 ~~~~~~~~~d~Vih~A~~~ 90 (353)
T PLN02896 72 SFDEAVKGCDGVFHVAASM 90 (353)
T ss_pred HHHHHHcCCCEEEECCccc
Confidence 9999999999999999864
No 45
>PRK05650 short chain dehydrogenase; Provisional
Probab=99.03 E-value=8.9e-10 Score=107.56 Aligned_cols=81 Identities=21% Similarity=0.137 Sum_probs=69.1
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc----
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~---- 87 (452)
+++|+||||++|+.++++|+++| .+|++.+|+.++++++.+++.. ...++.++.+|++|++++.++++
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g-------~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~ 73 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREG-------WRLALADVNEEGGEETLKLLRE-AGGDGFYQRCDVRDYSQLTALAQACEE 73 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 69999999999999999999998 7999999999998887776642 23467788999999999888775
Q ss_pred ---CccEEeecCCCCC
Q 012947 88 ---QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ---~~dvVIn~aGp~~ 100 (452)
+.|+||||+|...
T Consensus 74 ~~~~id~lI~~ag~~~ 89 (270)
T PRK05650 74 KWGGIDVIVNNAGVAS 89 (270)
T ss_pred HcCCCCEEEECCCCCC
Confidence 5899999999653
No 46
>PRK05866 short chain dehydrogenase; Provisional
Probab=99.03 E-value=8.3e-10 Score=109.62 Aligned_cols=82 Identities=13% Similarity=0.145 Sum_probs=70.1
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++|+||+|++|+.+++.|+++| ++|++++|+.++++++.+++.. ...++.++.+|++|++++.++++
T Consensus 41 k~vlItGasggIG~~la~~La~~G-------~~Vi~~~R~~~~l~~~~~~l~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~ 112 (293)
T PRK05866 41 KRILLTGASSGIGEAAAEQFARRG-------ATVVAVARREDLLDAVADRITR-AGGDAMAVPCDLSDLDAVDALVADVE 112 (293)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 579999999999999999999998 8999999999998887776631 12356788999999999988887
Q ss_pred ----CccEEeecCCCCC
Q 012947 88 ----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (452)
+.|+||||+|...
T Consensus 113 ~~~g~id~li~~AG~~~ 129 (293)
T PRK05866 113 KRIGGVDILINNAGRSI 129 (293)
T ss_pred HHcCCCCEEEECCCCCC
Confidence 6899999999653
No 47
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=99.03 E-value=9.8e-10 Score=106.15 Aligned_cols=84 Identities=20% Similarity=0.207 Sum_probs=70.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
...+++|+||+|++|+.++++|+++| ++|++.+|++++++++.+.+.. .+.++.++.+|++|++++++++++
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~i~~-~~~~~~~~~~D~~~~~~~~~~~~~ 80 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAG-------AEVILNGRDPAKLAAAAESLKG-QGLSAHALAFDVTDHDAVRAAIDA 80 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHh-cCceEEEEEccCCCHHHHHHHHHH
Confidence 34689999999999999999999998 8999999999988877776642 123577889999999999988764
Q ss_pred -------ccEEeecCCCCC
Q 012947 89 -------TKLLLNCVGPYR 100 (452)
Q Consensus 89 -------~dvVIn~aGp~~ 100 (452)
.|+|||++|...
T Consensus 81 ~~~~~~~~d~li~~ag~~~ 99 (255)
T PRK07523 81 FEAEIGPIDILVNNAGMQF 99 (255)
T ss_pred HHHhcCCCCEEEECCCCCC
Confidence 799999998653
No 48
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.03 E-value=1.6e-09 Score=104.28 Aligned_cols=82 Identities=16% Similarity=0.066 Sum_probs=69.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
.+++|+||||++|++++++|+++| ++|++.+|+.++++++.+++.. ...++.++.+|++|++++.++++
T Consensus 5 ~~vlItG~sg~iG~~la~~l~~~g-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~ 76 (258)
T PRK12429 5 KVALVTGAASGIGLEIALALAKEG-------AKVVIADLNDEAAAAAAEALQK-AGGKAIGVAMDVTDEEAINAGIDYAV 76 (258)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-------CeEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 579999999999999999999998 7999999999988877666532 13467789999999999988876
Q ss_pred ----CccEEeecCCCCC
Q 012947 88 ----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (452)
.+|+||||+|...
T Consensus 77 ~~~~~~d~vi~~a~~~~ 93 (258)
T PRK12429 77 ETFGGVDILVNNAGIQH 93 (258)
T ss_pred HHcCCCCEEEECCCCCC
Confidence 5799999998543
No 49
>PRK06482 short chain dehydrogenase; Provisional
Probab=99.03 E-value=7.5e-10 Score=108.33 Aligned_cols=79 Identities=18% Similarity=0.146 Sum_probs=68.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++|+||+|++|++++++|+++| ++|++..|+.++++.+.+.. ..++.++.+|++|.+++.++++
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g-------~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 71 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARG-------DRVAATVRRPDALDDLKARY----GDRLWVLQLDVTDSAAVRAVVDRAF 71 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHhc----cCceEEEEccCCCHHHHHHHHHHHH
Confidence 469999999999999999999998 79999999998888776654 2467889999999999988765
Q ss_pred ----CccEEeecCCCCC
Q 012947 88 ----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (452)
++|+||||+|...
T Consensus 72 ~~~~~id~vi~~ag~~~ 88 (276)
T PRK06482 72 AALGRIDVVVSNAGYGL 88 (276)
T ss_pred HHcCCCCEEEECCCCCC
Confidence 4799999999653
No 50
>PRK05993 short chain dehydrogenase; Provisional
Probab=99.02 E-value=7.2e-10 Score=108.85 Aligned_cols=75 Identities=19% Similarity=0.147 Sum_probs=64.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++|+||+|++|+.+++.|+++| ++|++++|+.++++++.+ ..+.++.+|++|+++++++++
T Consensus 5 k~vlItGasggiG~~la~~l~~~G-------~~Vi~~~r~~~~~~~l~~-------~~~~~~~~Dl~d~~~~~~~~~~~~ 70 (277)
T PRK05993 5 RSILITGCSSGIGAYCARALQSDG-------WRVFATCRKEEDVAALEA-------EGLEAFQLDYAEPESIAALVAQVL 70 (277)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHH-------CCceEEEccCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 799999999998876543 246788999999998887765
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
..|+||||+|..
T Consensus 71 ~~~~g~id~li~~Ag~~ 87 (277)
T PRK05993 71 ELSGGRLDALFNNGAYG 87 (277)
T ss_pred HHcCCCccEEEECCCcC
Confidence 469999999854
No 51
>PLN02253 xanthoxin dehydrogenase
Probab=99.02 E-value=8.7e-10 Score=108.10 Aligned_cols=81 Identities=12% Similarity=0.074 Sum_probs=70.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|+||++++++|+++| ++|++++|+.++.+++.+++. ...++.++.+|++|+++++++++
T Consensus 18 ~k~~lItGas~gIG~~la~~l~~~G-------~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~ 88 (280)
T PLN02253 18 GKVALVTGGATGIGESIVRLFHKHG-------AKVCIVDLQDDLGQNVCDSLG--GEPNVCFFHCDVTVEDDVSRAVDFT 88 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHhc--CCCceEEEEeecCCHHHHHHHHHHH
Confidence 4579999999999999999999998 899999999888887777664 13467889999999999988877
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
++|+||||||..
T Consensus 89 ~~~~g~id~li~~Ag~~ 105 (280)
T PLN02253 89 VDKFGTLDIMVNNAGLT 105 (280)
T ss_pred HHHhCCCCEEEECCCcC
Confidence 589999999864
No 52
>PRK05854 short chain dehydrogenase; Provisional
Probab=99.02 E-value=1.2e-09 Score=109.39 Aligned_cols=84 Identities=19% Similarity=0.152 Sum_probs=70.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~-~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++|+|||++||+.++++|+++| ++|++++|+.++++++.+++... ...++.++.+|++|.++++++++
T Consensus 14 gk~~lITGas~GIG~~~a~~La~~G-------~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~ 86 (313)
T PRK05854 14 GKRAVVTGASDGLGLGLARRLAAAG-------AEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQ 86 (313)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHH
Confidence 4689999999999999999999998 89999999999988877766321 12357789999999999988876
Q ss_pred ------CccEEeecCCCCC
Q 012947 88 ------QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (452)
+.|+||||||...
T Consensus 87 ~~~~~~~iD~li~nAG~~~ 105 (313)
T PRK05854 87 LRAEGRPIHLLINNAGVMT 105 (313)
T ss_pred HHHhCCCccEEEECCcccc
Confidence 3799999999653
No 53
>PRK05855 short chain dehydrogenase; Validated
Probab=99.02 E-value=9e-10 Score=118.49 Aligned_cols=84 Identities=10% Similarity=0.067 Sum_probs=71.1
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
+...++|+||+|++|+.++++|+++| ++|++++|+.++++++.+++.. ...++.++.+|++|++++.+++++
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~~~~~~~~ 385 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREG-------AEVVASDIDEAAAERTAELIRA-AGAVAHAYRVDVSDADAMEAFAEW 385 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHH
Confidence 45679999999999999999999998 7999999999998887776632 124678899999999999888763
Q ss_pred -------ccEEeecCCCCC
Q 012947 89 -------TKLLLNCVGPYR 100 (452)
Q Consensus 89 -------~dvVIn~aGp~~ 100 (452)
.|+||||||...
T Consensus 386 ~~~~~g~id~lv~~Ag~~~ 404 (582)
T PRK05855 386 VRAEHGVPDIVVNNAGIGM 404 (582)
T ss_pred HHHhcCCCcEEEECCccCC
Confidence 799999999753
No 54
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=99.02 E-value=2.4e-09 Score=106.99 Aligned_cols=84 Identities=15% Similarity=0.227 Sum_probs=66.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~-~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
..+|+|+|||||+|++++++|+++| ++|.+..|+.++.......... ....++.++.+|+.|++++.+++++
T Consensus 4 ~~~ilVtGatGfIG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 76 (322)
T PLN02662 4 GKVVCVTGASGYIASWLVKLLLQRG-------YTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDG 76 (322)
T ss_pred CCEEEEECChHHHHHHHHHHHHHCC-------CEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcC
Confidence 4689999999999999999999998 7999999987653322111100 0123678899999999999999999
Q ss_pred ccEEeecCCCCC
Q 012947 89 TKLLLNCVGPYR 100 (452)
Q Consensus 89 ~dvVIn~aGp~~ 100 (452)
+|+|||+|++..
T Consensus 77 ~d~Vih~A~~~~ 88 (322)
T PLN02662 77 CEGVFHTASPFY 88 (322)
T ss_pred CCEEEEeCCccc
Confidence 999999998753
No 55
>PRK07775 short chain dehydrogenase; Provisional
Probab=99.01 E-value=1.4e-09 Score=106.63 Aligned_cols=90 Identities=18% Similarity=0.190 Sum_probs=70.9
Q ss_pred CCCCCCCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHH
Q 012947 2 QAQSQIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPS 81 (452)
Q Consensus 2 ~~~~~~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~s 81 (452)
..+..+..+..++|+||+|++|++++++|+++| ++|++++|+.++++++.+++.. ...++.++.+|++|+++
T Consensus 2 ~~~~~~~~~~~vlVtGa~g~iG~~la~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~ 73 (274)
T PRK07775 2 PRFEPHPDRRPALVAGASSGIGAATAIELAAAG-------FPVALGARRVEKCEELVDKIRA-DGGEAVAFPLDVTDPDS 73 (274)
T ss_pred CCCCCCCCCCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEECCCCCHHH
Confidence 333333334689999999999999999999998 7999999998887776655421 12356788899999999
Q ss_pred HHHHHc-------CccEEeecCCCC
Q 012947 82 LHRLCS-------QTKLLLNCVGPY 99 (452)
Q Consensus 82 l~~~~~-------~~dvVIn~aGp~ 99 (452)
+.++++ +.|+||||+|..
T Consensus 74 ~~~~~~~~~~~~~~id~vi~~Ag~~ 98 (274)
T PRK07775 74 VKSFVAQAEEALGEIEVLVSGAGDT 98 (274)
T ss_pred HHHHHHHHHHhcCCCCEEEECCCcC
Confidence 988776 569999999854
No 56
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=99.01 E-value=1e-09 Score=110.23 Aligned_cols=82 Identities=27% Similarity=0.208 Sum_probs=70.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~- 88 (452)
...++|+||+|+||+.+++.|+++| ++|++++|+.++++++.+++.. ...++.++.+|++|.++++++++.
T Consensus 6 ~k~vlVTGas~gIG~~~a~~L~~~G-------~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~v~~~~~~~ 77 (322)
T PRK07453 6 KGTVIITGASSGVGLYAAKALAKRG-------WHVIMACRNLKKAEAAAQELGI-PPDSYTIIHIDLGDLDSVRRFVDDF 77 (322)
T ss_pred CCEEEEEcCCChHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHhhc-cCCceEEEEecCCCHHHHHHHHHHH
Confidence 4579999999999999999999998 7999999999999888877642 124678889999999999888763
Q ss_pred ------ccEEeecCCCC
Q 012947 89 ------TKLLLNCVGPY 99 (452)
Q Consensus 89 ------~dvVIn~aGp~ 99 (452)
+|+||||||..
T Consensus 78 ~~~~~~iD~li~nAg~~ 94 (322)
T PRK07453 78 RALGKPLDALVCNAAVY 94 (322)
T ss_pred HHhCCCccEEEECCccc
Confidence 89999999964
No 57
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=99.01 E-value=1.5e-09 Score=104.76 Aligned_cols=83 Identities=17% Similarity=0.160 Sum_probs=69.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
....++|+||+|+||+.++++|+++| ++|++.+|+.++++++.+++.. ...++.++.+|++|++++.++++
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~ 81 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAG-------AHVLVNGRNAATLEAAVAALRA-AGGAAEALAFDIADEEAVAAAFAR 81 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcC-------CeEEEEeCCHHHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHH
Confidence 45689999999999999999999998 8999999999888877766632 23457889999999999888776
Q ss_pred ------CccEEeecCCCC
Q 012947 88 ------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (452)
+.|+||||+|..
T Consensus 82 ~~~~~~~id~vi~~ag~~ 99 (256)
T PRK06124 82 IDAEHGRLDILVNNVGAR 99 (256)
T ss_pred HHHhcCCCCEEEECCCCC
Confidence 458999999964
No 58
>PRK07904 short chain dehydrogenase; Provisional
Probab=99.01 E-value=1e-09 Score=106.47 Aligned_cols=86 Identities=15% Similarity=0.179 Sum_probs=68.5
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhH-HHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR-VKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~k-l~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
....++|+||+|++|+.++++|++++. ++|++.+|+.++ ++++.+++......++.++.+|++|++++.+.++
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg------~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~ 80 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAP------ARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVID 80 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCC------CeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHH
Confidence 345799999999999999999999852 799999999886 7777766642112367889999999988766554
Q ss_pred ------CccEEeecCCCCC
Q 012947 88 ------QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (452)
+.|++||++|...
T Consensus 81 ~~~~~g~id~li~~ag~~~ 99 (253)
T PRK07904 81 AAFAGGDVDVAIVAFGLLG 99 (253)
T ss_pred HHHhcCCCCEEEEeeecCC
Confidence 6899999998653
No 59
>PRK06172 short chain dehydrogenase; Provisional
Probab=99.01 E-value=9.9e-10 Score=105.92 Aligned_cols=82 Identities=12% Similarity=0.086 Sum_probs=69.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~- 88 (452)
...++|+||+|++|+.++++|+++| .+|++++|+.++++++.+++.. ...++..+.+|++|++++.+++++
T Consensus 7 ~k~ilItGas~~iG~~ia~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~i~~~~~~~ 78 (253)
T PRK06172 7 GKVALVTGGAAGIGRATALAFAREG-------AKVVVADRDAAGGEETVALIRE-AGGEALFVACDVTRDAEVKALVEQT 78 (253)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHH
Confidence 4689999999999999999999998 7999999999888777666532 234678899999999999888764
Q ss_pred ------ccEEeecCCCC
Q 012947 89 ------TKLLLNCVGPY 99 (452)
Q Consensus 89 ------~dvVIn~aGp~ 99 (452)
.|+||||+|..
T Consensus 79 ~~~~g~id~li~~ag~~ 95 (253)
T PRK06172 79 IAAYGRLDYAFNNAGIE 95 (253)
T ss_pred HHHhCCCCEEEECCCCC
Confidence 59999999864
No 60
>PRK07062 short chain dehydrogenase; Provisional
Probab=99.01 E-value=9.9e-10 Score=106.76 Aligned_cols=83 Identities=19% Similarity=0.185 Sum_probs=68.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~-~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++|+||+|++|+.+++.|+++| ++|++++|+.+++++..+++... ...++..+.+|++|+++++++++
T Consensus 8 ~k~~lItGas~giG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 80 (265)
T PRK07062 8 GRVAVVTGGSSGIGLATVELLLEAG-------ASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAA 80 (265)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHH
Confidence 4579999999999999999999998 79999999999888777665321 12356788999999999988765
Q ss_pred ------CccEEeecCCCC
Q 012947 88 ------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (452)
+.|+||||||..
T Consensus 81 ~~~~~g~id~li~~Ag~~ 98 (265)
T PRK07062 81 VEARFGGVDMLVNNAGQG 98 (265)
T ss_pred HHHhcCCCCEEEECCCCC
Confidence 469999999964
No 61
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=99.00 E-value=3.2e-09 Score=106.37 Aligned_cols=83 Identities=17% Similarity=0.185 Sum_probs=67.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~-~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
..+|+|+|||||+|++++++|+++| ++|.+..|+.++.+.+.+.... ....++.++.+|++|++++.+++++
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 77 (322)
T PLN02986 5 GKLVCVTGASGYIASWIVKLLLLRG-------YTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEG 77 (322)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhC
Confidence 4689999999999999999999998 7999899987654433222110 0124678899999999999999999
Q ss_pred ccEEeecCCCC
Q 012947 89 TKLLLNCVGPY 99 (452)
Q Consensus 89 ~dvVIn~aGp~ 99 (452)
+|+|||+|++.
T Consensus 78 ~d~vih~A~~~ 88 (322)
T PLN02986 78 CDAVFHTASPV 88 (322)
T ss_pred CCEEEEeCCCc
Confidence 99999999975
No 62
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=99.00 E-value=3.2e-09 Score=103.11 Aligned_cols=79 Identities=15% Similarity=0.140 Sum_probs=68.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|+||+.++++|+++| ++|++.+|+.++++++.+++. .++.++.+|++|+++++++++
T Consensus 6 ~k~vlVtGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~ 74 (263)
T PRK06200 6 GQVALITGGGSGIGRALVERFLAEG-------ARVAVLERSAEKLASLRQRFG----DHVLVVEGDVTSYADNQRAVDQT 74 (263)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhC----CcceEEEccCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 799999999999888877652 357889999999999888775
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
+.|+||||+|..
T Consensus 75 ~~~~g~id~li~~ag~~ 91 (263)
T PRK06200 75 VDAFGKLDCFVGNAGIW 91 (263)
T ss_pred HHhcCCCCEEEECCCCc
Confidence 579999999964
No 63
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=98.99 E-value=3.2e-09 Score=107.51 Aligned_cols=81 Identities=17% Similarity=0.210 Sum_probs=62.9
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh-----HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-----RVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~-----kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
+|+|||||||||++++++|++.| ++|++++|+.+ .++.+.+........++.++.+|+.|.+++.+++
T Consensus 2 ~vlVTGatGfIG~~l~~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~ 74 (343)
T TIGR01472 2 IALITGITGQDGSYLAEFLLEKG-------YEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRII 74 (343)
T ss_pred eEEEEcCCCcHHHHHHHHHHHCC-------CEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHH
Confidence 79999999999999999999998 79999999754 2332222110000235789999999999999999
Q ss_pred cC--ccEEeecCCCC
Q 012947 87 SQ--TKLLLNCVGPY 99 (452)
Q Consensus 87 ~~--~dvVIn~aGp~ 99 (452)
++ +|+|||+|+..
T Consensus 75 ~~~~~d~ViH~Aa~~ 89 (343)
T TIGR01472 75 DEIKPTEIYNLAAQS 89 (343)
T ss_pred HhCCCCEEEECCccc
Confidence 85 69999999864
No 64
>PRK06949 short chain dehydrogenase; Provisional
Probab=98.99 E-value=3.3e-09 Score=102.37 Aligned_cols=82 Identities=20% Similarity=0.154 Sum_probs=69.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..+++|+||+|++|++++++|+++| ++|++++|+.++++++.+++.. ...++.++.+|++|++++.++++
T Consensus 9 ~k~ilItGasg~IG~~~a~~l~~~G-------~~Vi~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (258)
T PRK06949 9 GKVALVTGASSGLGARFAQVLAQAG-------AKVVLASRRVERLKELRAEIEA-EGGAAHVVSLDVTDYQSIKAAVAHA 80 (258)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHH
Confidence 4689999999999999999999998 7999999999998887766531 12457889999999999988876
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
++|+||||+|..
T Consensus 81 ~~~~~~~d~li~~ag~~ 97 (258)
T PRK06949 81 ETEAGTIDILVNNSGVS 97 (258)
T ss_pred HHhcCCCCEEEECCCCC
Confidence 479999999964
No 65
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=98.99 E-value=3.5e-09 Score=102.48 Aligned_cols=112 Identities=13% Similarity=0.078 Sum_probs=76.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh-HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~-kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++|+||+++||+.+++.|+++| ++|++.+|+.. ++.+..++. ..++.++.+|++|+++++++++
T Consensus 8 ~k~~lItGas~gIG~aia~~l~~~G-------~~vv~~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~ 76 (251)
T PRK12481 8 GKVAIITGCNTGLGQGMAIGLAKAG-------ADIVGVGVAEAPETQAQVEAL----GRKFHFITADLIQQKDIDSIVSQ 76 (251)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CEEEEecCchHHHHHHHHHHc----CCeEEEEEeCCCCHHHHHHHHHH
Confidence 3579999999999999999999998 89999998653 333333332 3467889999999999988876
Q ss_pred ------CccEEeecCCCCCCCCHHHHH--HHHHhCCcEEEecCcHHHHHHHHHHH
Q 012947 88 ------QTKLLLNCVGPYRLHGDPVAA--ACVHSGCDYLDISGEPEFMERMEARY 134 (452)
Q Consensus 88 ------~~dvVIn~aGp~~~~~~~vv~--ac~~~g~~yvDlsge~~~~~~~~~~~ 134 (452)
+.|++|||+|..... ++.+ ...-..+.-+++.+.....+...+.+
T Consensus 77 ~~~~~g~iD~lv~~ag~~~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~ 129 (251)
T PRK12481 77 AVEVMGHIDILINNAGIIRRQ--DLLEFGNKDWDDVININQKTVFFLSQAVAKQF 129 (251)
T ss_pred HHHHcCCCCEEEECCCcCCCC--CcccCCHHHHHHHheeCcHHHHHHHHHHHHHH
Confidence 479999999965321 1111 11111233455555555556554444
No 66
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=98.99 E-value=2e-09 Score=103.07 Aligned_cols=83 Identities=10% Similarity=0.047 Sum_probs=69.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..+++|+||+|++|+.++++|+++| ++|++.+|+.++++...+++.. ...++.++.+|++|++++.++++
T Consensus 6 ~~~ilItGasg~iG~~l~~~l~~~g-------~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~~~~~~~~~ 77 (251)
T PRK12826 6 GRVALVTGAARGIGRAIAVRLAADG-------AEVIVVDICGDDAAATAELVEA-AGGKARARQVDVRDRAALKAAVAAG 77 (251)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHH
Confidence 4579999999999999999999998 7999999998887776665532 12357889999999999998876
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
++|+|||++|...
T Consensus 78 ~~~~~~~d~vi~~ag~~~ 95 (251)
T PRK12826 78 VEDFGRLDILVANAGIFP 95 (251)
T ss_pred HHHhCCCCEEEECCCCCC
Confidence 6899999998654
No 67
>PRK09291 short chain dehydrogenase; Provisional
Probab=98.99 E-value=2e-09 Score=103.89 Aligned_cols=80 Identities=19% Similarity=0.155 Sum_probs=68.0
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-Ccc
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-QTK 90 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-~~d 90 (452)
.++|+||||++|+.++++|++.| ++|++.+|+.++++++.+.... ...++.++.+|++|++++.+++. ++|
T Consensus 4 ~vlVtGasg~iG~~ia~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~id 75 (257)
T PRK09291 4 TILITGAGSGFGREVALRLARKG-------HNVIAGVQIAPQVTALRAEAAR-RGLALRVEKLDLTDAIDRAQAAEWDVD 75 (257)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcceEEEeeCCCHHHHHHHhcCCCC
Confidence 69999999999999999999998 7999999998887766554421 12457889999999999999887 899
Q ss_pred EEeecCCCC
Q 012947 91 LLLNCVGPY 99 (452)
Q Consensus 91 vVIn~aGp~ 99 (452)
+||||+|..
T Consensus 76 ~vi~~ag~~ 84 (257)
T PRK09291 76 VLLNNAGIG 84 (257)
T ss_pred EEEECCCcC
Confidence 999999864
No 68
>PRK08263 short chain dehydrogenase; Provisional
Probab=98.99 E-value=1.2e-09 Score=106.99 Aligned_cols=79 Identities=18% Similarity=0.106 Sum_probs=67.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++|+||+|++|+.++++|++++ ++|++++|+.++++++.+.+. ..+.++.+|++|++++.++++
T Consensus 4 k~vlItGasg~iG~~~a~~l~~~g-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~ 72 (275)
T PRK08263 4 KVWFITGASRGFGRAWTEAALERG-------DRVVATARDTATLADLAEKYG----DRLLPLALDVTDRAAVFAAVETAV 72 (275)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHhcc----CCeeEEEccCCCHHHHHHHHHHHH
Confidence 379999999999999999999998 799999999999887766542 457788999999999988776
Q ss_pred ----CccEEeecCCCCC
Q 012947 88 ----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (452)
++|+||||+|...
T Consensus 73 ~~~~~~d~vi~~ag~~~ 89 (275)
T PRK08263 73 EHFGRLDIVVNNAGYGL 89 (275)
T ss_pred HHcCCCCEEEECCCCcc
Confidence 4699999999653
No 69
>PRK05884 short chain dehydrogenase; Provisional
Probab=98.99 E-value=2.3e-09 Score=102.02 Aligned_cols=76 Identities=18% Similarity=0.271 Sum_probs=66.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
++++|+||+|++|+.+++.|+++| ++|++.+|+.++++++.+++ ++.++.+|++|+++++++++
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g-------~~v~~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~v~~~~~~~~ 67 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDG-------HKVTLVGARRDDLEVAAKEL------DVDAIVCDNTDPASLEEARGLFP 67 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHhc------cCcEEecCCCCHHHHHHHHHHHh
Confidence 369999999999999999999988 79999999999988777654 35688999999999998876
Q ss_pred -CccEEeecCCCC
Q 012947 88 -QTKLLLNCVGPY 99 (452)
Q Consensus 88 -~~dvVIn~aGp~ 99 (452)
+.|+||||+|+.
T Consensus 68 ~~id~lv~~ag~~ 80 (223)
T PRK05884 68 HHLDTIVNVPAPS 80 (223)
T ss_pred hcCcEEEECCCcc
Confidence 579999999863
No 70
>PRK07326 short chain dehydrogenase; Provisional
Probab=98.98 E-value=4.3e-09 Score=100.24 Aligned_cols=81 Identities=19% Similarity=0.154 Sum_probs=70.1
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++|+||||++|+.++++|++++ ++|++++|++++++++.+++.. ...+.++.+|++|++++.++++
T Consensus 7 ~~ilItGatg~iG~~la~~l~~~g-------~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~D~~~~~~~~~~~~~~~ 77 (237)
T PRK07326 7 KVALITGGSKGIGFAIAEALLAEG-------YKVAITARDQKELEEAAAELNN--KGNVLGLAADVRDEADVQRAVDAIV 77 (237)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCC-------CEEEEeeCCHHHHHHHHHHHhc--cCcEEEEEccCCCHHHHHHHHHHHH
Confidence 579999999999999999999987 7899999999998888777642 1467889999999999988776
Q ss_pred ----CccEEeecCCCCC
Q 012947 88 ----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (452)
++|+|||++|+..
T Consensus 78 ~~~~~~d~vi~~ag~~~ 94 (237)
T PRK07326 78 AAFGGLDVLIANAGVGH 94 (237)
T ss_pred HHcCCCCEEEECCCCCC
Confidence 6899999998754
No 71
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=98.98 E-value=2.7e-09 Score=103.92 Aligned_cols=83 Identities=20% Similarity=0.151 Sum_probs=70.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~- 88 (452)
...++|+||+|++|+.++++|+++| +++++.+|+.++++++.+++.. ...++.++.+|++|++++++++++
T Consensus 10 ~k~~lItGa~~~iG~~ia~~l~~~G-------~~vv~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~ 81 (265)
T PRK07097 10 GKIALITGASYGIGFAIAKAYAKAG-------ATIVFNDINQELVDKGLAAYRE-LGIEAHGYVCDVTDEDGVQAMVSQI 81 (265)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CeEEEEeCCHHHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHH
Confidence 4579999999999999999999998 7999999999988887766632 123678899999999999888763
Q ss_pred ------ccEEeecCCCCC
Q 012947 89 ------TKLLLNCVGPYR 100 (452)
Q Consensus 89 ------~dvVIn~aGp~~ 100 (452)
.|+||||+|...
T Consensus 82 ~~~~~~id~li~~ag~~~ 99 (265)
T PRK07097 82 EKEVGVIDILVNNAGIIK 99 (265)
T ss_pred HHhCCCCCEEEECCCCCC
Confidence 799999999643
No 72
>PLN02650 dihydroflavonol-4-reductase
Probab=98.98 E-value=4.6e-09 Score=106.67 Aligned_cols=83 Identities=20% Similarity=0.254 Sum_probs=67.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~-~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
..+|+|||||||||++++++|+++| ++|++.+|+.++...+....... ...++.++.+|+.|.+.+.+++++
T Consensus 5 ~k~iLVTGatGfIGs~l~~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~ 77 (351)
T PLN02650 5 KETVCVTGASGFIGSWLVMRLLERG-------YTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRG 77 (351)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHCC-------CEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhC
Confidence 4589999999999999999999998 79999999877665543322100 112567889999999999999999
Q ss_pred ccEEeecCCCC
Q 012947 89 TKLLLNCVGPY 99 (452)
Q Consensus 89 ~dvVIn~aGp~ 99 (452)
+|+|||+|++.
T Consensus 78 ~d~ViH~A~~~ 88 (351)
T PLN02650 78 CTGVFHVATPM 88 (351)
T ss_pred CCEEEEeCCCC
Confidence 99999999864
No 73
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=98.98 E-value=7.5e-09 Score=99.73 Aligned_cols=78 Identities=17% Similarity=0.252 Sum_probs=68.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
++++|+||||++|+.++++|+++| ++|++.+|+.++++++.+.+. .++.++.+|++|.+++.++++
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~i~~~~~~~~ 69 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQG-------HKVIATGRRQERLQELKDELG----DNLYIAQLDVRNRAAIEEMLASLP 69 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHhc----cceEEEEecCCCHHHHHHHHHHHH
Confidence 469999999999999999999998 799999999999888776653 367889999999999988775
Q ss_pred ----CccEEeecCCCC
Q 012947 88 ----QTKLLLNCVGPY 99 (452)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (452)
++|+|||++|..
T Consensus 70 ~~~~~id~vi~~ag~~ 85 (248)
T PRK10538 70 AEWRNIDVLVNNAGLA 85 (248)
T ss_pred HHcCCCCEEEECCCcc
Confidence 689999999854
No 74
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=98.98 E-value=5e-09 Score=108.34 Aligned_cols=107 Identities=20% Similarity=0.336 Sum_probs=77.9
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHH--HHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 012947 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQA--LQWASPSHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 8 ~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l--~~~l~~~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
.+.++|+|+|||||+|++++++|++++ ++|++..|+.++++.. .+++.. ...++.++.+|++|++++.++
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G-------~~V~~l~R~~~~~~~~~~~~~~~~-~~~~v~~v~~Dl~d~~~l~~~ 129 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRG-------YNVVAVAREKSGIRGKNGKEDTKK-ELPGAEVVFGDVTDADSLRKV 129 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEEechhhccccchhhHHhh-hcCCceEEEeeCCCHHHHHHH
Confidence 345789999999999999999999988 7999999988664311 111100 124688999999999999999
Q ss_pred Hc----CccEEeecCCCCCCC-----------CHHHHHHHHHhCC-cEEEecC
Q 012947 86 CS----QTKLLLNCVGPYRLH-----------GDPVAAACVHSGC-DYLDISG 122 (452)
Q Consensus 86 ~~----~~dvVIn~aGp~~~~-----------~~~vv~ac~~~g~-~yvDlsg 122 (452)
++ ++|+||||+|+.... ..+++++|.+.++ ++|.++.
T Consensus 130 ~~~~~~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS 182 (390)
T PLN02657 130 LFSEGDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSA 182 (390)
T ss_pred HHHhCCCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEee
Confidence 98 589999999853211 1356666766665 3555553
No 75
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=98.97 E-value=2e-09 Score=104.32 Aligned_cols=81 Identities=15% Similarity=0.164 Sum_probs=65.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..+++|+||+|+||+.++++|+++| ++|++++|+ ++++++.+.+.. ...++.++.+|++|.+++.++++
T Consensus 15 ~k~vlItGas~gIG~~ia~~l~~~G-------~~v~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~i~~~~~~~ 85 (258)
T PRK06935 15 GKVAIVTGGNTGLGQGYAVALAKAG-------ADIIITTHG-TNWDETRRLIEK-EGRKVTFVQVDLTKPESAEKVVKEA 85 (258)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCC-cHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHH
Confidence 4689999999999999999999998 899999998 455454444321 12467889999999999988887
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
..|++|||+|..
T Consensus 86 ~~~~g~id~li~~ag~~ 102 (258)
T PRK06935 86 LEEFGKIDILVNNAGTI 102 (258)
T ss_pred HHHcCCCCEEEECCCCC
Confidence 579999999864
No 76
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=98.97 E-value=4.2e-09 Score=107.08 Aligned_cols=82 Identities=16% Similarity=0.167 Sum_probs=63.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHH----HHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQ----ALQWASPSHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~----l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
.++|+|+|||||+|++++++|++++ ++|++.+|....... +..........++.++.+|+.|.+.+.++
T Consensus 15 ~~~vlVtGatGfiG~~lv~~L~~~g-------~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~ 87 (348)
T PRK15181 15 PKRWLITGVAGFIGSGLLEELLFLN-------QTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKA 87 (348)
T ss_pred CCEEEEECCccHHHHHHHHHHHHCC-------CEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHH
Confidence 4789999999999999999999998 789888885443222 21111100113577899999999999999
Q ss_pred HcCccEEeecCCC
Q 012947 86 CSQTKLLLNCVGP 98 (452)
Q Consensus 86 ~~~~dvVIn~aGp 98 (452)
++++|+|||+|+.
T Consensus 88 ~~~~d~ViHlAa~ 100 (348)
T PRK15181 88 CKNVDYVLHQAAL 100 (348)
T ss_pred hhCCCEEEECccc
Confidence 9999999999985
No 77
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.97 E-value=1.6e-09 Score=104.11 Aligned_cols=81 Identities=11% Similarity=0.090 Sum_probs=66.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEE-EecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLAL-AGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~i-agR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
.+++|+||+|++|+.++++|+++| ++|++ .+|+.++++++.+++.. ...++.++.+|++|++++.++++
T Consensus 5 ~~vlItGa~g~iG~~~a~~l~~~g-------~~v~~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 76 (250)
T PRK08063 5 KVALVTGSSRGIGKAIALRLAEEG-------YDIAVNYARSRKAAEETAEEIEA-LGRKALAVKANVGDVEKIKEMFAQI 76 (250)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEcCCCHHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 479999999999999999999998 67665 58998888777666532 13467888999999999988876
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
.+|+|||++|..
T Consensus 77 ~~~~~~id~vi~~ag~~ 93 (250)
T PRK08063 77 DEEFGRLDVFVNNAASG 93 (250)
T ss_pred HHHcCCCCEEEECCCCC
Confidence 479999999864
No 78
>PRK12828 short chain dehydrogenase; Provisional
Probab=98.97 E-value=4.2e-09 Score=100.00 Aligned_cols=80 Identities=24% Similarity=0.223 Sum_probs=67.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..+++|+||||++|+.+++.|+++| ++|++++|+.++..+..+++. ...+.++.+|+.|.+++.++++
T Consensus 7 ~k~vlItGatg~iG~~la~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~ 76 (239)
T PRK12828 7 GKVVAITGGFGGLGRATAAWLAARG-------ARVALIGRGAAPLSQTLPGVP---ADALRIGGIDLVDPQAARRAVDEV 76 (239)
T ss_pred CCEEEEECCCCcHhHHHHHHHHHCC-------CeEEEEeCChHhHHHHHHHHh---hcCceEEEeecCCHHHHHHHHHHH
Confidence 4689999999999999999999998 799999999988777666553 2356788899999999988776
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
++|+|||++|..
T Consensus 77 ~~~~~~~d~vi~~ag~~ 93 (239)
T PRK12828 77 NRQFGRLDALVNIAGAF 93 (239)
T ss_pred HHHhCCcCEEEECCccc
Confidence 579999999854
No 79
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.97 E-value=3.2e-09 Score=101.82 Aligned_cols=81 Identities=17% Similarity=0.135 Sum_probs=69.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..+++|+||||++|+.++++|+++| ++|++++|+.++++++..++.. ..++.++.+|+.|+++++++++
T Consensus 5 ~~~vlItGasg~iG~~l~~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~ 75 (251)
T PRK07231 5 GKVAIVTGASSGIGEGIARRFAAEG-------ARVVVTDRNEEAAERVAAEILA--GGRAIAVAADVSDEADVEAAVAAA 75 (251)
T ss_pred CcEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHH
Confidence 4589999999999999999999998 7899999999988887776631 2457789999999999998876
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
+.|+|||++|..
T Consensus 76 ~~~~~~~d~vi~~ag~~ 92 (251)
T PRK07231 76 LERFGSVDILVNNAGTT 92 (251)
T ss_pred HHHhCCCCEEEECCCCC
Confidence 469999999864
No 80
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=98.97 E-value=1.5e-09 Score=104.50 Aligned_cols=80 Identities=15% Similarity=0.094 Sum_probs=67.1
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc----
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~---- 87 (452)
+++|+||+|++|+.++++|+++| .+|++.+|+.++++++.+++.. ...++.++.+|++|++++.++++
T Consensus 2 ~~lItG~sg~iG~~la~~l~~~G-------~~v~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~i~~~~~~~~~ 73 (254)
T TIGR02415 2 VALVTGGAQGIGKGIAERLAKDG-------FAVAVADLNEETAKETAKEINQ-AGGKAVAYKLDVSDKDQVFSAIDQAAE 73 (254)
T ss_pred EEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 58999999999999999999998 7999999998887777666532 13457888999999999988765
Q ss_pred ---CccEEeecCCCC
Q 012947 88 ---QTKLLLNCVGPY 99 (452)
Q Consensus 88 ---~~dvVIn~aGp~ 99 (452)
.+|+||||+|..
T Consensus 74 ~~~~id~vi~~ag~~ 88 (254)
T TIGR02415 74 KFGGFDVMVNNAGVA 88 (254)
T ss_pred HcCCCCEEEECCCcC
Confidence 469999999864
No 81
>PRK07060 short chain dehydrogenase; Provisional
Probab=98.97 E-value=3.7e-09 Score=101.11 Aligned_cols=78 Identities=19% Similarity=0.162 Sum_probs=67.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..+++|+||+|++|+.+++.|+++| ++|++.+|+.++++++.+.. +..++.+|++|.+++.++++
T Consensus 9 ~~~~lItGa~g~iG~~~a~~l~~~g-------~~V~~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~v~~~~~~~ 75 (245)
T PRK07060 9 GKSVLVTGASSGIGRACAVALAQRG-------ARVVAAARNAAALDRLAGET------GCEPLRLDVGDDAAIRAALAAA 75 (245)
T ss_pred CCEEEEeCCcchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHh------CCeEEEecCCCHHHHHHHHHHh
Confidence 3689999999999999999999998 79999999998887776643 35678899999999988886
Q ss_pred -CccEEeecCCCCC
Q 012947 88 -QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -~~dvVIn~aGp~~ 100 (452)
++|+|||++|...
T Consensus 76 ~~~d~vi~~ag~~~ 89 (245)
T PRK07060 76 GAFDGLVNCAGIAS 89 (245)
T ss_pred CCCCEEEECCCCCC
Confidence 4799999998643
No 82
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=98.97 E-value=2.4e-09 Score=103.36 Aligned_cols=82 Identities=11% Similarity=0.097 Sum_probs=69.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|++|+.++++|+++| ++|++.+|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 9 ~k~~lItGas~giG~~ia~~L~~~G-------~~vvl~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~~~~~~~~~ 80 (254)
T PRK08085 9 GKNILITGSAQGIGFLLATGLAEYG-------AEIIINDITAERAELAVAKLRQ-EGIKAHAAPFNVTHKQEVEAAIEHI 80 (254)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcC-------CEEEEEcCCHHHHHHHHHHHHh-cCCeEEEEecCCCCHHHHHHHHHHH
Confidence 4579999999999999999999998 7999999999998887776642 12356778899999999988775
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
+.|+|||++|..
T Consensus 81 ~~~~~~id~vi~~ag~~ 97 (254)
T PRK08085 81 EKDIGPIDVLINNAGIQ 97 (254)
T ss_pred HHhcCCCCEEEECCCcC
Confidence 379999999854
No 83
>PRK06138 short chain dehydrogenase; Provisional
Probab=98.97 E-value=3.1e-09 Score=102.04 Aligned_cols=81 Identities=14% Similarity=0.069 Sum_probs=69.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..+++|+||+|++|+.++++|+++| ++|++.+|+.+++++..+++. ...++.++.+|++|+++++++++
T Consensus 5 ~k~~lItG~sg~iG~~la~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~i 75 (252)
T PRK06138 5 GRVAIVTGAGSGIGRATAKLFAREG-------ARVVVADRDAEAAERVAAAIA--AGGRAFARQGDVGSAEAVEALVDFV 75 (252)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCC-------CeEEEecCCHHHHHHHHHHHh--cCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 3589999999999999999999998 799999999988877776653 13457889999999999988876
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
++|+||||+|..
T Consensus 76 ~~~~~~id~vi~~ag~~ 92 (252)
T PRK06138 76 AARWGRLDVLVNNAGFG 92 (252)
T ss_pred HHHcCCCCEEEECCCCC
Confidence 579999999964
No 84
>PRK09186 flagellin modification protein A; Provisional
Probab=98.97 E-value=6.2e-09 Score=100.34 Aligned_cols=83 Identities=23% Similarity=0.296 Sum_probs=68.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~-~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
..+++|+||+|++|+.+++.|+++| ++|++.+|+.++++++.+++... ....+.++.+|++|++++.+++++
T Consensus 4 ~k~vlItGas~giG~~~a~~l~~~g-------~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 76 (256)
T PRK09186 4 GKTILITGAGGLIGSALVKAILEAG-------GIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSK 76 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHH
Confidence 3579999999999999999999998 79999999999988887776321 122456779999999999888874
Q ss_pred -------ccEEeecCCCC
Q 012947 89 -------TKLLLNCVGPY 99 (452)
Q Consensus 89 -------~dvVIn~aGp~ 99 (452)
.|+||||||+.
T Consensus 77 ~~~~~~~id~vi~~A~~~ 94 (256)
T PRK09186 77 SAEKYGKIDGAVNCAYPR 94 (256)
T ss_pred HHHHcCCccEEEECCccc
Confidence 79999999753
No 85
>PRK06057 short chain dehydrogenase; Provisional
Probab=98.97 E-value=2.3e-09 Score=103.64 Aligned_cols=77 Identities=17% Similarity=0.121 Sum_probs=66.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..+++|+||+|++|+.++++|+++| ++|++++|+..+++++.+++. ..++.+|++|+++++++++
T Consensus 7 ~~~vlItGasggIG~~~a~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~------~~~~~~D~~~~~~~~~~~~~~ 73 (255)
T PRK06057 7 GRVAVITGGGSGIGLATARRLAAEG-------ATVVVGDIDPEAGKAAADEVG------GLFVPTDVTDEDAVNALFDTA 73 (255)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHcC------CcEEEeeCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 799999999988877776552 2578999999999988876
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
+.|+||||+|..
T Consensus 74 ~~~~~~id~vi~~ag~~ 90 (255)
T PRK06057 74 AETYGSVDIAFNNAGIS 90 (255)
T ss_pred HHHcCCCCEEEECCCcC
Confidence 469999999864
No 86
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=98.97 E-value=4e-09 Score=102.45 Aligned_cols=112 Identities=10% Similarity=0.067 Sum_probs=80.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|+||+.+++.|+++| ++|++++|+.++++++.+.. ..++..+.+|++|.+++.++++
T Consensus 5 ~k~vlItGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~l~~~~----~~~~~~~~~D~~~~~~~~~~~~~~ 73 (262)
T TIGR03325 5 GEVVLVTGGASGLGRAIVDRFVAEG-------ARVAVLDKSAAGLQELEAAH----GDAVVGVEGDVRSLDDHKEAVARC 73 (262)
T ss_pred CcEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHhhc----CCceEEEEeccCCHHHHHHHHHHH
Confidence 3589999999999999999999998 89999999998888776543 2457788999999998887775
Q ss_pred -----CccEEeecCCCCCCCC------HH-HHHHHHHhCCcEEEecCcHHHHHHHHHHH
Q 012947 88 -----QTKLLLNCVGPYRLHG------DP-VAAACVHSGCDYLDISGEPEFMERMEARY 134 (452)
Q Consensus 88 -----~~dvVIn~aGp~~~~~------~~-vv~ac~~~g~~yvDlsge~~~~~~~~~~~ 134 (452)
+.|+||||+|.....+ .. ..+. -..+.-+++.+....++...+.+
T Consensus 74 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~--~~~~~~~N~~~~~~l~~~~~~~~ 130 (262)
T TIGR03325 74 VAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEA--FDEVFHINVKGYLLAVKAALPAL 130 (262)
T ss_pred HHHhCCCCEEEECCCCCccCCccccCCchhhhHH--HHHhheeecHhHHHHHHHHHHHH
Confidence 4699999999642111 00 0011 11234566666666666664433
No 87
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.97 E-value=2.1e-09 Score=102.77 Aligned_cols=83 Identities=20% Similarity=0.191 Sum_probs=69.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|++|+.++++|+++| ++|++++|+.++++++.+++.. ...++.++.+|++|++++.++++
T Consensus 7 ~~~vlVtG~sg~iG~~l~~~L~~~G-------~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 78 (239)
T PRK07666 7 GKNALITGAGRGIGRAVAIALAKEG-------VNVGLLARTEENLKAVAEEVEA-YGVKVVIATADVSDYEEVTAAIEQL 78 (239)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHH-hCCeEEEEECCCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 7999999999888777666532 23467788999999999988876
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
++|+|||++|...
T Consensus 79 ~~~~~~id~vi~~ag~~~ 96 (239)
T PRK07666 79 KNELGSIDILINNAGISK 96 (239)
T ss_pred HHHcCCccEEEEcCcccc
Confidence 6899999998643
No 88
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=98.96 E-value=7.9e-09 Score=104.10 Aligned_cols=82 Identities=17% Similarity=0.226 Sum_probs=67.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+|+|+||+||+|++++++|++++. ..+|.+.+|+..+...+.+.+. ..++.++.+|++|++++.++++++
T Consensus 4 ~k~vLVTGatG~IG~~l~~~L~~~g~-----~~~V~~~~r~~~~~~~~~~~~~---~~~~~~v~~Dl~d~~~l~~~~~~i 75 (324)
T TIGR03589 4 NKSILITGGTGSFGKAFISRLLENYN-----PKKIIIYSRDELKQWEMQQKFP---APCLRFFIGDVRDKERLTRALRGV 75 (324)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHhCC-----CcEEEEEcCChhHHHHHHHHhC---CCcEEEEEccCCCHHHHHHHHhcC
Confidence 35799999999999999999999862 1588899998777655554442 246788999999999999999999
Q ss_pred cEEeecCCCC
Q 012947 90 KLLLNCVGPY 99 (452)
Q Consensus 90 dvVIn~aGp~ 99 (452)
|+|||+||..
T Consensus 76 D~Vih~Ag~~ 85 (324)
T TIGR03589 76 DYVVHAAALK 85 (324)
T ss_pred CEEEECcccC
Confidence 9999999854
No 89
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=98.96 E-value=1.8e-09 Score=97.25 Aligned_cols=82 Identities=23% Similarity=0.355 Sum_probs=69.5
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC--hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN--PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~--~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
.++|+||++.+|+.++++|++++. .+|++++|+ .++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 2 ~~lItGa~~giG~~~a~~l~~~g~------~~v~~~~r~~~~~~~~~l~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 74 (167)
T PF00106_consen 2 TVLITGASSGIGRALARALARRGA------RVVILTSRSEDSEGAQELIQELKA-PGAKITFIECDLSDPESIRALIEEV 74 (167)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTT------EEEEEEESSCHHHHHHHHHHHHHH-TTSEEEEEESETTSHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHhcCc------eEEEEeeecccccccccccccccc-ccccccccccccccccccccccccc
Confidence 589999999999999999999962 789999999 7778777776642 23578899999999999988876
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
..|+||||+|...
T Consensus 75 ~~~~~~ld~li~~ag~~~ 92 (167)
T PF00106_consen 75 IKRFGPLDILINNAGIFS 92 (167)
T ss_dssp HHHHSSESEEEEECSCTT
T ss_pred cccccccccccccccccc
Confidence 5699999999765
No 90
>PRK06101 short chain dehydrogenase; Provisional
Probab=98.96 E-value=1.9e-09 Score=103.39 Aligned_cols=76 Identities=26% Similarity=0.253 Sum_probs=66.0
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC---
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ--- 88 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~--- 88 (452)
.++|+||||++|+.+++.|+++| ++|++.+|+.++++++.+.. .++.++.+|++|++++++++++
T Consensus 3 ~vlItGas~giG~~la~~L~~~G-------~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~ 70 (240)
T PRK06101 3 AVLITGATSGIGKQLALDYAKQG-------WQVIACGRNQSVLDELHTQS-----ANIFTLAFDVTDHPGTKAALSQLPF 70 (240)
T ss_pred EEEEEcCCcHHHHHHHHHHHhCC-------CEEEEEECCHHHHHHHHHhc-----CCCeEEEeeCCCHHHHHHHHHhccc
Confidence 69999999999999999999998 79999999999887776532 3578899999999999999875
Q ss_pred -ccEEeecCCCC
Q 012947 89 -TKLLLNCVGPY 99 (452)
Q Consensus 89 -~dvVIn~aGp~ 99 (452)
.|++||++|..
T Consensus 71 ~~d~~i~~ag~~ 82 (240)
T PRK06101 71 IPELWIFNAGDC 82 (240)
T ss_pred CCCEEEEcCccc
Confidence 48899999853
No 91
>PRK08589 short chain dehydrogenase; Validated
Probab=98.96 E-value=4e-09 Score=103.29 Aligned_cols=81 Identities=15% Similarity=0.079 Sum_probs=67.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+++||+.+++.|+++| ++|++++|+ ++++++.+++.. ...++..+.+|++|+++++++++
T Consensus 6 ~k~vlItGas~gIG~aia~~l~~~G-------~~vi~~~r~-~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~ 76 (272)
T PRK08589 6 NKVAVITGASTGIGQASAIALAQEG-------AYVLAVDIA-EAVSETVDKIKS-NGGKAKAYHVDISDEQQVKDFASEI 76 (272)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCc-HHHHHHHHHHHh-cCCeEEEEEeecCCHHHHHHHHHHH
Confidence 3579999999999999999999998 899999999 777777766632 12457889999999999988776
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
+.|+||||||..
T Consensus 77 ~~~~g~id~li~~Ag~~ 93 (272)
T PRK08589 77 KEQFGRVDVLFNNAGVD 93 (272)
T ss_pred HHHcCCcCEEEECCCCC
Confidence 469999999864
No 92
>PRK07791 short chain dehydrogenase; Provisional
Probab=98.96 E-value=3.8e-09 Score=104.47 Aligned_cols=83 Identities=16% Similarity=0.041 Sum_probs=67.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh---------hHHHHHHHHhCCCCCCCccEEEEeCCCHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP---------TRVKQALQWASPSHSLSIPILTADTTDPP 80 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~---------~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~ 80 (452)
...++|+||+++||+.+++.|+++| .+|++++|+. ++++++.+++.. ...++.++.+|++|++
T Consensus 6 ~k~~lITGas~GIG~aia~~la~~G-------~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~Dv~~~~ 77 (286)
T PRK07791 6 GRVVIVTGAGGGIGRAHALAFAAEG-------ARVVVNDIGVGLDGSASGGSAAQAVVDEIVA-AGGEAVANGDDIADWD 77 (286)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEeeCCccccccccchhHHHHHHHHHHh-cCCceEEEeCCCCCHH
Confidence 4589999999999999999999998 7899988876 777777776632 1345678899999999
Q ss_pred HHHHHHc-------CccEEeecCCCCC
Q 012947 81 SLHRLCS-------QTKLLLNCVGPYR 100 (452)
Q Consensus 81 sl~~~~~-------~~dvVIn~aGp~~ 100 (452)
+++++++ +.|+||||||...
T Consensus 78 ~v~~~~~~~~~~~g~id~lv~nAG~~~ 104 (286)
T PRK07791 78 GAANLVDAAVETFGGLDVLVNNAGILR 104 (286)
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 9887765 5699999999653
No 93
>PRK12939 short chain dehydrogenase; Provisional
Probab=98.96 E-value=3.5e-09 Score=101.49 Aligned_cols=83 Identities=16% Similarity=0.117 Sum_probs=69.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|++|+.++++|+++| +++++.+|++++++.+.+++.. ...++.++.+|++|+++++++++
T Consensus 7 ~~~vlItGa~g~iG~~la~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~ 78 (250)
T PRK12939 7 GKRALVTGAARGLGAAFAEALAEAG-------ATVAFNDGLAAEARELAAALEA-AGGRAHAIAADLADPASVQRFFDAA 78 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHH
Confidence 4679999999999999999999998 7899999999988877766632 12467889999999999988774
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
++|+||||+|...
T Consensus 79 ~~~~~~id~vi~~ag~~~ 96 (250)
T PRK12939 79 AAALGGLDGLVNNAGITN 96 (250)
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 5899999998643
No 94
>PRK06114 short chain dehydrogenase; Provisional
Probab=98.96 E-value=3.1e-09 Score=102.75 Aligned_cols=83 Identities=14% Similarity=0.096 Sum_probs=66.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh-HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~-kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
...++|+||+|+||+.+++.|+++| ++|++.+|+.+ .++++.+++.. ...++..+.+|+.|++++++++++
T Consensus 8 ~k~~lVtG~s~gIG~~ia~~l~~~G-------~~v~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~i~~~~~~ 79 (254)
T PRK06114 8 GQVAFVTGAGSGIGQRIAIGLAQAG-------ADVALFDLRTDDGLAETAEHIEA-AGRRAIQIAADVTSKADLRAAVAR 79 (254)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCCcchHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHH
Confidence 3589999999999999999999998 89999999754 45555555531 124577889999999999887764
Q ss_pred -------ccEEeecCCCCC
Q 012947 89 -------TKLLLNCVGPYR 100 (452)
Q Consensus 89 -------~dvVIn~aGp~~ 100 (452)
.|+||||+|...
T Consensus 80 ~~~~~g~id~li~~ag~~~ 98 (254)
T PRK06114 80 TEAELGALTLAVNAAGIAN 98 (254)
T ss_pred HHHHcCCCCEEEECCCCCC
Confidence 599999999653
No 95
>PRK09134 short chain dehydrogenase; Provisional
Probab=98.95 E-value=2.4e-09 Score=103.66 Aligned_cols=83 Identities=14% Similarity=0.118 Sum_probs=65.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR-~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
..+++|+||+|++|+.+++.|+++| ++++++.| +.++++.+.+++.. ...++.++.+|++|.+++.+++++
T Consensus 9 ~k~vlItGas~giG~~la~~l~~~g-------~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~ 80 (258)
T PRK09134 9 PRAALVTGAARRIGRAIALDLAAHG-------FDVAVHYNRSRDEAEALAAEIRA-LGRRAVALQADLADEAEVRALVAR 80 (258)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCCHHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHH
Confidence 4689999999999999999999988 68877665 55666666555421 134577899999999999888763
Q ss_pred -------ccEEeecCCCCC
Q 012947 89 -------TKLLLNCVGPYR 100 (452)
Q Consensus 89 -------~dvVIn~aGp~~ 100 (452)
+|+||||+|...
T Consensus 81 ~~~~~~~iD~vi~~ag~~~ 99 (258)
T PRK09134 81 ASAALGPITLLVNNASLFE 99 (258)
T ss_pred HHHHcCCCCEEEECCcCCC
Confidence 699999999643
No 96
>PRK07677 short chain dehydrogenase; Provisional
Probab=98.95 E-value=2e-09 Score=103.92 Aligned_cols=81 Identities=17% Similarity=0.227 Sum_probs=68.1
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++|+||+|++|+.+++.|+++| ++|++++|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 2 k~~lItG~s~giG~~ia~~l~~~G-------~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~ 73 (252)
T PRK07677 2 KVVIITGGSSGMGKAMAKRFAEEG-------ANVVITGRTKEKLEEAKLEIEQ-FPGQVLTVQMDVRNPEDVQKMVEQID 73 (252)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 7999999999888877766532 12467789999999999988775
Q ss_pred ----CccEEeecCCCC
Q 012947 88 ----QTKLLLNCVGPY 99 (452)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (452)
..|+||||+|..
T Consensus 74 ~~~~~id~lI~~ag~~ 89 (252)
T PRK07677 74 EKFGRIDALINNAAGN 89 (252)
T ss_pred HHhCCccEEEECCCCC
Confidence 469999999854
No 97
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=98.95 E-value=8.5e-09 Score=100.98 Aligned_cols=82 Identities=20% Similarity=0.208 Sum_probs=69.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|++|+.+++.|+++| ++|++.+|+.++++++.+++.. ...++..+.+|++|++++.++++
T Consensus 10 ~k~vlVtGas~giG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~ 81 (278)
T PRK08277 10 GKVAVITGGGGVLGGAMAKELARAG-------AKVAILDRNQEKAEAVVAEIKA-AGGEALAVKADVLDKESLEQARQQI 81 (278)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHH
Confidence 4679999999999999999999998 7999999999888877776632 12357788999999999887765
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
++|+||||+|..
T Consensus 82 ~~~~g~id~li~~ag~~ 98 (278)
T PRK08277 82 LEDFGPCDILINGAGGN 98 (278)
T ss_pred HHHcCCCCEEEECCCCC
Confidence 679999999954
No 98
>PRK07832 short chain dehydrogenase; Provisional
Probab=98.95 E-value=2.3e-09 Score=104.86 Aligned_cols=81 Identities=15% Similarity=0.119 Sum_probs=65.6
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc----
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~---- 87 (452)
+++|+||||++|+.++++|+++| ++|++.+|+.++++++.+++.......+.++.+|++|+++++++++
T Consensus 2 ~vlItGas~giG~~la~~la~~G-------~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 74 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQG-------AELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHA 74 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHH
Confidence 69999999999999999999998 7899999999888777766532111224557899999999887765
Q ss_pred ---CccEEeecCCCC
Q 012947 88 ---QTKLLLNCVGPY 99 (452)
Q Consensus 88 ---~~dvVIn~aGp~ 99 (452)
+.|+||||+|..
T Consensus 75 ~~~~id~lv~~ag~~ 89 (272)
T PRK07832 75 AHGSMDVVMNIAGIS 89 (272)
T ss_pred hcCCCCEEEECCCCC
Confidence 369999999964
No 99
>PRK07102 short chain dehydrogenase; Provisional
Probab=98.94 E-value=1.7e-09 Score=103.66 Aligned_cols=82 Identities=18% Similarity=0.218 Sum_probs=68.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~-- 88 (452)
++++|+||||++|+.++++|+++| ++|++++|+.++++++.+++......++.++.+|++|+++++++++.
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G-------~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 74 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAG-------ARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLP 74 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcC-------CEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHh
Confidence 379999999999999999999998 79999999999887776655321134678999999999998887764
Q ss_pred --ccEEeecCCCC
Q 012947 89 --TKLLLNCVGPY 99 (452)
Q Consensus 89 --~dvVIn~aGp~ 99 (452)
.|+|||++|..
T Consensus 75 ~~~d~vv~~ag~~ 87 (243)
T PRK07102 75 ALPDIVLIAVGTL 87 (243)
T ss_pred hcCCEEEECCcCC
Confidence 59999999854
No 100
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=98.94 E-value=1.1e-08 Score=105.98 Aligned_cols=80 Identities=18% Similarity=0.201 Sum_probs=66.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
+..+++|+||+|++|+++++.|+++| .+|++++|+.+++++..+.. ..++..+.+|++|++++.+.+.+
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G-------~~Vi~l~r~~~~l~~~~~~~----~~~v~~v~~Dvsd~~~v~~~l~~ 245 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQG-------AKVVALTSNSDKITLEINGE----DLPVKTLHWQVGQEAALAELLEK 245 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHhhc----CCCeEEEEeeCCCHHHHHHHhCC
Confidence 34689999999999999999999998 79999999988775443321 12456788999999999999999
Q ss_pred ccEEeecCCCC
Q 012947 89 TKLLLNCVGPY 99 (452)
Q Consensus 89 ~dvVIn~aGp~ 99 (452)
+|++|||+|..
T Consensus 246 IDiLInnAGi~ 256 (406)
T PRK07424 246 VDILIINHGIN 256 (406)
T ss_pred CCEEEECCCcC
Confidence 99999999864
No 101
>PRK06500 short chain dehydrogenase; Provisional
Probab=98.94 E-value=5.8e-09 Score=100.00 Aligned_cols=78 Identities=21% Similarity=0.219 Sum_probs=66.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++|+||+|++|+.++++|+++| ++|++.+|+.++++++.++++ .++.++.+|++|.+++.++++
T Consensus 7 k~vlItGasg~iG~~la~~l~~~g-------~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~ 75 (249)
T PRK06500 7 KTALITGGTSGIGLETARQFLAEG-------ARVAITGRDPASLEAARAELG----ESALVIRADAGDVAAQKALAQALA 75 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-------CEEEEecCCHHHHHHHHHHhC----CceEEEEecCCCHHHHHHHHHHHH
Confidence 579999999999999999999998 799999999988888777663 356788999999988776654
Q ss_pred ----CccEEeecCCCC
Q 012947 88 ----QTKLLLNCVGPY 99 (452)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (452)
++|+||||+|..
T Consensus 76 ~~~~~id~vi~~ag~~ 91 (249)
T PRK06500 76 EAFGRLDAVFINAGVA 91 (249)
T ss_pred HHhCCCCEEEECCCCC
Confidence 579999999864
No 102
>PRK06181 short chain dehydrogenase; Provisional
Probab=98.94 E-value=5.7e-09 Score=101.21 Aligned_cols=82 Identities=28% Similarity=0.269 Sum_probs=68.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
.+++|+||+|++|+.+++.|++++ ++|++++|+.++.+++.+++.. ...++.++.+|+.|++++.++++
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g-------~~Vi~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~ 73 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAG-------AQLVLAARNETRLASLAQELAD-HGGEALVVPTDVSDAEACERLIEAAV 73 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 369999999999999999999988 7999999999888777666532 23467788999999999988776
Q ss_pred ----CccEEeecCCCCC
Q 012947 88 ----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (452)
+.|+||||+|...
T Consensus 74 ~~~~~id~vi~~ag~~~ 90 (263)
T PRK06181 74 ARFGGIDILVNNAGITM 90 (263)
T ss_pred HHcCCCCEEEECCCccc
Confidence 5799999998654
No 103
>PRK09072 short chain dehydrogenase; Provisional
Probab=98.94 E-value=2.9e-09 Score=103.45 Aligned_cols=81 Identities=21% Similarity=0.187 Sum_probs=69.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|++|+.++++|+++| ++|++++|+.++++++..++. ...++.++.+|++|+++++++++
T Consensus 5 ~~~vlItG~s~~iG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~ 75 (263)
T PRK09072 5 DKRVLLTGASGGIGQALAEALAAAG-------ARLLLVGRNAEKLEALAARLP--YPGRHRWVVADLTSEAGREAVLARA 75 (263)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHh--cCCceEEEEccCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 799999999999888877663 23577889999999999887765
Q ss_pred ----CccEEeecCCCC
Q 012947 88 ----QTKLLLNCVGPY 99 (452)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (452)
..|+|||++|..
T Consensus 76 ~~~~~id~lv~~ag~~ 91 (263)
T PRK09072 76 REMGGINVLINNAGVN 91 (263)
T ss_pred HhcCCCCEEEECCCCC
Confidence 469999999864
No 104
>PRK05875 short chain dehydrogenase; Provisional
Probab=98.94 E-value=1.2e-08 Score=99.71 Aligned_cols=83 Identities=19% Similarity=0.231 Sum_probs=69.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~-~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
..+++|+||+|+||++++++|+++| ++|++.+|+.++++.+.+++... ...++.++.+|+.|++++.++++
T Consensus 7 ~k~vlItGasg~IG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 79 (276)
T PRK05875 7 DRTYLVTGGGSGIGKGVAAGLVAAG-------AAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDA 79 (276)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-------CeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHH
Confidence 3689999999999999999999998 79999999998887776665320 12467788999999999988876
Q ss_pred ------CccEEeecCCCC
Q 012947 88 ------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (452)
++|+|||++|..
T Consensus 80 ~~~~~~~~d~li~~ag~~ 97 (276)
T PRK05875 80 ATAWHGRLHGVVHCAGGS 97 (276)
T ss_pred HHHHcCCCCEEEECCCcc
Confidence 579999999854
No 105
>PRK07890 short chain dehydrogenase; Provisional
Probab=98.94 E-value=2.9e-09 Score=102.76 Aligned_cols=82 Identities=17% Similarity=0.112 Sum_probs=69.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..+++|+||||+||+.++++|+++| ++|++++|++++++++.+++.. ...++..+.+|++|+++++++++
T Consensus 5 ~k~vlItGa~~~IG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 76 (258)
T PRK07890 5 GKVVVVSGVGPGLGRTLAVRAARAG-------ADVVLAARTAERLDEVAAEIDD-LGRRALAVPTDITDEDQCANLVALA 76 (258)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHH-hCCceEEEecCCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 8999999999888877776632 12457889999999999987775
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
++|+|||++|..
T Consensus 77 ~~~~g~~d~vi~~ag~~ 93 (258)
T PRK07890 77 LERFGRVDALVNNAFRV 93 (258)
T ss_pred HHHcCCccEEEECCccC
Confidence 579999999864
No 106
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=98.93 E-value=5.6e-09 Score=105.91 Aligned_cols=76 Identities=17% Similarity=0.252 Sum_probs=62.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCC-CHHHHHHHHcCc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTT-DPPSLHRLCSQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~-d~~sl~~~~~~~ 89 (452)
++|+|||||||+|++++++|++.+. ++|.+.+|+.++...+.. ...+.++.+|+. +.+.+.++++++
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~------~~V~~~~r~~~~~~~~~~------~~~~~~~~~Dl~~~~~~~~~~~~~~ 69 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTD------WEVYGMDMQTDRLGDLVN------HPRMHFFEGDITINKEWIEYHVKKC 69 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCC------CeEEEEeCcHHHHHHhcc------CCCeEEEeCCCCCCHHHHHHHHcCC
Confidence 4799999999999999999998631 789999998765543321 235789999997 778898999999
Q ss_pred cEEeecCCC
Q 012947 90 KLLLNCVGP 98 (452)
Q Consensus 90 dvVIn~aGp 98 (452)
|+|||+|+.
T Consensus 70 d~ViH~aa~ 78 (347)
T PRK11908 70 DVILPLVAI 78 (347)
T ss_pred CEEEECccc
Confidence 999999974
No 107
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.93 E-value=4.8e-09 Score=105.00 Aligned_cols=128 Identities=19% Similarity=0.118 Sum_probs=95.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~-~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++|||||.+||+.+|+.|+.+| .+|++++||.++.++.++++.. ....++.++.+|++|.+++.++++
T Consensus 35 ~~~~vVTGansGIG~eta~~La~~G-------a~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~ 107 (314)
T KOG1208|consen 35 GKVALVTGATSGIGFETARELALRG-------AHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEE 107 (314)
T ss_pred CcEEEEECCCCchHHHHHHHHHhCC-------CEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHH
Confidence 4679999999999999999999999 8999999999999998888864 234567779999999999998876
Q ss_pred ------CccEEeecCCCCCCCC---HHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCC
Q 012947 88 ------QTKLLLNCVGPYRLHG---DPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACG 150 (452)
Q Consensus 88 ------~~dvVIn~aGp~~~~~---~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G 150 (452)
..|++|||||.+.... ..-+|.+.. ++|+ |...+++.+++.+...+. ..+++|+|..
T Consensus 108 ~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~--tN~l---g~flLt~lLlp~lk~s~~-~RIV~vsS~~ 173 (314)
T KOG1208|consen 108 FKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFA--TNYL---GHFLLTELLLPLLKRSAP-SRIVNVSSIL 173 (314)
T ss_pred HHhcCCCccEEEeCcccccCCcccCccchhheeh--hhhH---HHHHHHHHHHHHHhhCCC-CCEEEEcCcc
Confidence 4699999999775542 111233322 3333 777778888777765443 4555555544
No 108
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.93 E-value=5.1e-09 Score=101.23 Aligned_cols=76 Identities=13% Similarity=0.135 Sum_probs=61.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh-HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~-kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++|+||+|++|+.++++|+++| ++|++..|+.+ .++++.+ .++.++.+|++|+++++++++
T Consensus 7 ~k~~lItGas~gIG~~~a~~l~~~G-------~~v~~~~~~~~~~~~~l~~-------~~~~~~~~Dl~~~~~~~~~~~~ 72 (255)
T PRK06463 7 GKVALITGGTRGIGRAIAEAFLREG-------AKVAVLYNSAENEAKELRE-------KGVFTIKCDVGNRDQVKKSKEV 72 (255)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCC-------CEEEEEeCCcHHHHHHHHh-------CCCeEEEecCCCHHHHHHHHHH
Confidence 3689999999999999999999998 78888776544 3333322 246789999999999988876
Q ss_pred ------CccEEeecCCCC
Q 012947 88 ------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (452)
+.|+||||+|..
T Consensus 73 ~~~~~~~id~li~~ag~~ 90 (255)
T PRK06463 73 VEKEFGRVDVLVNNAGIM 90 (255)
T ss_pred HHHHcCCCCEEEECCCcC
Confidence 579999999864
No 109
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=98.92 E-value=4.3e-09 Score=100.27 Aligned_cols=82 Identities=16% Similarity=0.131 Sum_probs=68.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~-- 88 (452)
.+++|+||+|++|+.++++|+++| ++|++++|+.++++.+.+++.. ...++.++.+|+.|++++.+++++
T Consensus 6 ~~ilItGasg~iG~~l~~~l~~~g-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~ 77 (246)
T PRK05653 6 KTALVTGASRGIGRAIALRLAADG-------AKVVIYDSNEEAAEALAAELRA-AGGEARVLVFDVSDEAAVRALIEAAV 77 (246)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCChhHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHHHH
Confidence 579999999999999999999998 7899999999888776665531 234677888999999999887764
Q ss_pred -----ccEEeecCCCCC
Q 012947 89 -----TKLLLNCVGPYR 100 (452)
Q Consensus 89 -----~dvVIn~aGp~~ 100 (452)
+|+|||++|...
T Consensus 78 ~~~~~id~vi~~ag~~~ 94 (246)
T PRK05653 78 EAFGALDILVNNAGITR 94 (246)
T ss_pred HHhCCCCEEEECCCcCC
Confidence 599999998643
No 110
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=98.92 E-value=2.4e-09 Score=105.18 Aligned_cols=79 Identities=20% Similarity=0.313 Sum_probs=61.0
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC-CCCCCcc----EEEEeCCCHHHHHHHHc
Q 012947 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIP----ILTADTTDPPSLHRLCS 87 (452)
Q Consensus 13 ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~-~~~~~v~----~v~~Dl~d~~sl~~~~~ 87 (452)
|+||||+|.||+.+|++|++.+| .++++.+|++.++-++..++.. ....++. .+.+|+.|.+.+.++++
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p------~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~ 74 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGP------KKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFE 74 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-------SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT
T ss_pred CEEEccccHHHHHHHHHHHhcCC------CeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHh
Confidence 79999999999999999999986 6999999999999988888731 0122343 34789999999999999
Q ss_pred --CccEEeecCC
Q 012947 88 --QTKLLLNCVG 97 (452)
Q Consensus 88 --~~dvVIn~aG 97 (452)
++|+|+|+|.
T Consensus 75 ~~~pdiVfHaAA 86 (293)
T PF02719_consen 75 EYKPDIVFHAAA 86 (293)
T ss_dssp --T-SEEEE---
T ss_pred hcCCCEEEEChh
Confidence 8999999996
No 111
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=98.92 E-value=1.1e-08 Score=102.60 Aligned_cols=83 Identities=18% Similarity=0.203 Sum_probs=66.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~-~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
..+++|+||+||||+++++.|+++| ++|.+..|+.++.+.....+.. ....++.++.+|++|++++.+++++
T Consensus 5 ~k~vlVtG~~G~IG~~l~~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~ 77 (325)
T PLN02989 5 GKVVCVTGASGYIASWIVKLLLFRG-------YTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDG 77 (325)
T ss_pred CCEEEEECCchHHHHHHHHHHHHCC-------CEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcC
Confidence 4689999999999999999999998 7898889987765443222110 0123578889999999999999999
Q ss_pred ccEEeecCCCC
Q 012947 89 TKLLLNCVGPY 99 (452)
Q Consensus 89 ~dvVIn~aGp~ 99 (452)
+|+||||||+.
T Consensus 78 ~d~vih~A~~~ 88 (325)
T PLN02989 78 CETVFHTASPV 88 (325)
T ss_pred CCEEEEeCCCC
Confidence 99999999964
No 112
>PRK09135 pteridine reductase; Provisional
Probab=98.92 E-value=9.7e-09 Score=98.21 Aligned_cols=83 Identities=18% Similarity=0.152 Sum_probs=65.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
..+++|+||+|++|++++++|++++ ++|++++|+ .++++++.+.+.......+.++.+|++|.+++.++++
T Consensus 6 ~~~vlItGa~g~iG~~l~~~l~~~g-------~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 78 (249)
T PRK09135 6 AKVALITGGARRIGAAIARTLHAAG-------YRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAA 78 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHH
Confidence 3579999999999999999999998 799999986 4555555544421012356788999999999988876
Q ss_pred ------CccEEeecCCCC
Q 012947 88 ------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (452)
++|+||||+|..
T Consensus 79 ~~~~~~~~d~vi~~ag~~ 96 (249)
T PRK09135 79 CVAAFGRLDALVNNASSF 96 (249)
T ss_pred HHHHcCCCCEEEECCCCC
Confidence 469999999964
No 113
>PRK06198 short chain dehydrogenase; Provisional
Probab=98.91 E-value=6.5e-09 Score=100.53 Aligned_cols=82 Identities=17% Similarity=0.169 Sum_probs=67.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceE-EEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKS-LALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~-v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
..+++|+||+|++|+.++++|+++| ++ |++.+|+.++++...+++.. ...++.++.+|++|++++.++++
T Consensus 6 ~k~vlItGa~g~iG~~la~~l~~~G-------~~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~ 77 (260)
T PRK06198 6 GKVALVTGGTQGLGAAIARAFAERG-------AAGLVICGRNAEKGEAQAAELEA-LGAKAVFVQADLSDVEDCRRVVAA 77 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCC-------CCeEEEEcCCHHHHHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHHH
Confidence 3579999999999999999999998 66 99999998887766665531 13456778999999999888775
Q ss_pred ------CccEEeecCCCC
Q 012947 88 ------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (452)
++|+||||+|..
T Consensus 78 ~~~~~g~id~li~~ag~~ 95 (260)
T PRK06198 78 ADEAFGRLDALVNAAGLT 95 (260)
T ss_pred HHHHhCCCCEEEECCCcC
Confidence 479999999864
No 114
>PLN00198 anthocyanidin reductase; Provisional
Probab=98.91 E-value=1.4e-08 Score=102.58 Aligned_cols=81 Identities=19% Similarity=0.252 Sum_probs=65.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHH--HHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQAL--QWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~--~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
..+|+|+||+||+|++++++|+++| ++|.+..|+.+...... ..+. ...++.++.+|++|++++.++++
T Consensus 9 ~~~vlItG~~GfIG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~ 79 (338)
T PLN00198 9 KKTACVIGGTGFLASLLIKLLLQKG-------YAVNTTVRDPENQKKIAHLRALQ--ELGDLKIFGADLTDEESFEAPIA 79 (338)
T ss_pred CCeEEEECCchHHHHHHHHHHHHCC-------CEEEEEECCCCCHHHHHHHHhcC--CCCceEEEEcCCCChHHHHHHHh
Confidence 4679999999999999999999998 78988888865543322 1221 11357889999999999999999
Q ss_pred CccEEeecCCCC
Q 012947 88 QTKLLLNCVGPY 99 (452)
Q Consensus 88 ~~dvVIn~aGp~ 99 (452)
++|+|||+|++.
T Consensus 80 ~~d~vih~A~~~ 91 (338)
T PLN00198 80 GCDLVFHVATPV 91 (338)
T ss_pred cCCEEEEeCCCC
Confidence 999999999864
No 115
>PRK12746 short chain dehydrogenase; Provisional
Probab=98.91 E-value=5.5e-09 Score=100.67 Aligned_cols=82 Identities=17% Similarity=0.162 Sum_probs=66.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEE-EecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLAL-AGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~i-agR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
..+++|+||+|++|++++++|+++| .++++ ..|+.+++++..+++.. ...++.++.+|++|++++.++++
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~G-------~~v~i~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~i~~~~~~ 77 (254)
T PRK12746 6 GKVALVTGASRGIGRAIAMRLANDG-------ALVAIHYGRNKQAADETIREIES-NGGKAFLIEADLNSIDGVKKLVEQ 77 (254)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEcCCCHHHHHHHHHHHHh-cCCcEEEEEcCcCCHHHHHHHHHH
Confidence 3589999999999999999999998 67766 47888887777666531 12356788999999999988776
Q ss_pred ------------CccEEeecCCCC
Q 012947 88 ------------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------------~~dvVIn~aGp~ 99 (452)
++|+|||++|..
T Consensus 78 ~~~~~~~~~~~~~id~vi~~ag~~ 101 (254)
T PRK12746 78 LKNELQIRVGTSEIDILVNNAGIG 101 (254)
T ss_pred HHHHhccccCCCCccEEEECCCCC
Confidence 479999999864
No 116
>PRK12829 short chain dehydrogenase; Provisional
Probab=98.91 E-value=4.7e-09 Score=101.54 Aligned_cols=81 Identities=14% Similarity=0.212 Sum_probs=69.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
+..+++|+||+|++|+.++++|+++| ++|++++|+.+.++++.++.. ..++.++.+|++|++++.++++
T Consensus 10 ~~~~vlItGa~g~iG~~~a~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~ 79 (264)
T PRK12829 10 DGLRVLVTGGASGIGRAIAEAFAEAG-------ARVHVCDVSEAALAATAARLP---GAKVTATVADVADPAQVERVFDT 79 (264)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHh---cCceEEEEccCCCHHHHHHHHHH
Confidence 34689999999999999999999998 789999999988877766553 1256789999999999988775
Q ss_pred ------CccEEeecCCCC
Q 012947 88 ------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (452)
++|+|||++|..
T Consensus 80 ~~~~~~~~d~vi~~ag~~ 97 (264)
T PRK12829 80 AVERFGGLDVLVNNAGIA 97 (264)
T ss_pred HHHHhCCCCEEEECCCCC
Confidence 579999999965
No 117
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=98.91 E-value=4.5e-09 Score=100.80 Aligned_cols=81 Identities=17% Similarity=0.124 Sum_probs=68.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++|+||||++|+.++++|++++ ++|++.+|+.++.+++.+++.. ...++.++.+|+.|.++++++++
T Consensus 4 ~~ilItGas~~iG~~la~~l~~~g-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~ 75 (250)
T TIGR03206 4 KTAIVTGGGGGIGGATCRRFAEEG-------AKVAVFDLNREAAEKVAADIRA-KGGNAQAFACDITDRDSVDTAVAAAE 75 (250)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCC-------CEEEEecCCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 579999999999999999999998 7999999999888777665532 13467889999999999988876
Q ss_pred ----CccEEeecCCCC
Q 012947 88 ----QTKLLLNCVGPY 99 (452)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (452)
..|+|||++|..
T Consensus 76 ~~~~~~d~vi~~ag~~ 91 (250)
T TIGR03206 76 QALGPVDVLVNNAGWD 91 (250)
T ss_pred HHcCCCCEEEECCCCC
Confidence 579999999853
No 118
>PLN02780 ketoreductase/ oxidoreductase
Probab=98.91 E-value=2.8e-09 Score=107.29 Aligned_cols=83 Identities=19% Similarity=0.206 Sum_probs=64.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCC--HHHHHHH-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTD--PPSLHRL- 85 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~-~~~~v~~v~~Dl~d--~~sl~~~- 85 (452)
...++|+||||+||++++++|+++| ++|++++|+.++++++.+++... ...++..+.+|+++ .+.++++
T Consensus 53 g~~~lITGAs~GIG~alA~~La~~G-------~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~ 125 (320)
T PLN02780 53 GSWALVTGPTDGIGKGFAFQLARKG-------LNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIK 125 (320)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC-------CCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHH
Confidence 3579999999999999999999998 79999999999999888776421 12356778899985 3444433
Q ss_pred --HcC--ccEEeecCCCC
Q 012947 86 --CSQ--TKLLLNCVGPY 99 (452)
Q Consensus 86 --~~~--~dvVIn~aGp~ 99 (452)
+.+ +|++|||||..
T Consensus 126 ~~~~~~didilVnnAG~~ 143 (320)
T PLN02780 126 ETIEGLDVGVLINNVGVS 143 (320)
T ss_pred HHhcCCCccEEEEecCcC
Confidence 333 55999999964
No 119
>PRK07774 short chain dehydrogenase; Provisional
Probab=98.91 E-value=1.2e-08 Score=97.91 Aligned_cols=82 Identities=18% Similarity=0.175 Sum_probs=67.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..+++|+||+|++|+.++++|+++| .+|++.+|+.++++.+.+++.. ...++.++.+|++|.++++++++
T Consensus 6 ~k~vlItGasg~iG~~la~~l~~~g-------~~vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~ 77 (250)
T PRK07774 6 DKVAIVTGAAGGIGQAYAEALAREG-------ASVVVADINAEGAERVAKQIVA-DGGTAIAVQVDVSDPDSAKAMADAT 77 (250)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 7999999998887776665531 12356788999999999887766
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
..|+||||+|..
T Consensus 78 ~~~~~~id~vi~~ag~~ 94 (250)
T PRK07774 78 VSAFGGIDYLVNNAAIY 94 (250)
T ss_pred HHHhCCCCEEEECCCCc
Confidence 579999999964
No 120
>PRK12743 oxidoreductase; Provisional
Probab=98.91 E-value=6.2e-09 Score=100.78 Aligned_cols=82 Identities=15% Similarity=0.122 Sum_probs=65.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR-~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
.+++|+||+|++|+.++++|+++| ++|++..| +.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 3 k~vlItGas~giG~~~a~~l~~~G-------~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~ 74 (256)
T PRK12743 3 QVAIVTASDSGIGKACALLLAQQG-------FDIGITWHSDEEGAKETAEEVRS-HGVRAEIRQLDLSDLPEGAQALDKL 74 (256)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCCChHHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHHH
Confidence 379999999999999999999998 78888764 66666666655532 23467889999999999887776
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
..|+||||+|...
T Consensus 75 ~~~~~~id~li~~ag~~~ 92 (256)
T PRK12743 75 IQRLGRIDVLVNNAGAMT 92 (256)
T ss_pred HHHcCCCCEEEECCCCCC
Confidence 4799999998643
No 121
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=98.91 E-value=4.4e-09 Score=101.71 Aligned_cols=82 Identities=17% Similarity=0.123 Sum_probs=67.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCC-CCCccEEEEeCCCHHHHHHHHc--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSH-SLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~-~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..++|+||+|++|+.++++|++++ ++|++++|+.++++++.+++.... ..++.++.+|++|++++.++++
T Consensus 3 k~ilItG~~~~IG~~la~~l~~~g-------~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~ 75 (259)
T PRK12384 3 QVAVVIGGGQTLGAFLCHGLAEEG-------YRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGV 75 (259)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHH
Confidence 469999999999999999999998 899999999888877766553101 1357889999999999887775
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
+.|+|||++|..
T Consensus 76 ~~~~~~id~vv~~ag~~ 92 (259)
T PRK12384 76 DEIFGRVDLLVYNAGIA 92 (259)
T ss_pred HHHcCCCCEEEECCCcC
Confidence 469999999854
No 122
>PRK06125 short chain dehydrogenase; Provisional
Probab=98.90 E-value=6e-09 Score=100.96 Aligned_cols=83 Identities=19% Similarity=0.217 Sum_probs=69.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|++|+.+++.|+++| ++|++++|+.++++++.+++......++.++.+|++|+++++++++
T Consensus 7 ~k~vlItG~~~giG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 79 (259)
T PRK06125 7 GKRVLITGASKGIGAAAAEAFAAEG-------CHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEA 79 (259)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHh
Confidence 3689999999999999999999998 7999999999988887766642113457788999999999988776
Q ss_pred -CccEEeecCCCC
Q 012947 88 -QTKLLLNCVGPY 99 (452)
Q Consensus 88 -~~dvVIn~aGp~ 99 (452)
++|+||||+|..
T Consensus 80 g~id~lv~~ag~~ 92 (259)
T PRK06125 80 GDIDILVNNAGAI 92 (259)
T ss_pred CCCCEEEECCCCC
Confidence 589999999864
No 123
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.90 E-value=9.2e-09 Score=99.64 Aligned_cols=79 Identities=11% Similarity=0.096 Sum_probs=64.2
Q ss_pred CCeEEEEcCC--chHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 10 LFDVIILGAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 10 ~~~ilV~GAT--G~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
...++|+||+ +.||+.+++.|+++| ++|++.+|+. +.++..+++. ...+.++.+|++|+++++++++
T Consensus 7 ~k~~lItGas~~~gIG~a~a~~la~~G-------~~Vi~~~r~~-~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~ 75 (252)
T PRK06079 7 GKKIVVMGVANKRSIAWGCAQAIKDQG-------ATVIYTYQND-RMKKSLQKLV---DEEDLLVECDVASDESIERAFA 75 (252)
T ss_pred CCEEEEeCCCCCCchHHHHHHHHHHCC-------CEEEEecCch-HHHHHHHhhc---cCceeEEeCCCCCHHHHHHHHH
Confidence 3579999999 799999999999998 8999999984 4445455543 2356788999999999988765
Q ss_pred -------CccEEeecCCCC
Q 012947 88 -------QTKLLLNCVGPY 99 (452)
Q Consensus 88 -------~~dvVIn~aGp~ 99 (452)
+.|+||||||..
T Consensus 76 ~~~~~~g~iD~lv~nAg~~ 94 (252)
T PRK06079 76 TIKERVGKIDGIVHAIAYA 94 (252)
T ss_pred HHHHHhCCCCEEEEccccc
Confidence 479999999964
No 124
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=98.90 E-value=5.2e-09 Score=101.65 Aligned_cols=83 Identities=12% Similarity=0.089 Sum_probs=66.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR-~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++|+||+++||+.+++.|++.| ++|++++| +.++++.+.+++......++.++.+|++|+++++++++
T Consensus 8 ~k~vlItGas~gIG~~ia~~l~~~G-------~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 80 (260)
T PRK08416 8 GKTLVISGGTRGIGKAIVYEFAQSG-------VNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKK 80 (260)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH
Confidence 4589999999999999999999998 78888765 66777666655532113467889999999999988776
Q ss_pred ------CccEEeecCCCC
Q 012947 88 ------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (452)
++|+||||||..
T Consensus 81 ~~~~~g~id~lv~nAg~~ 98 (260)
T PRK08416 81 IDEDFDRVDFFISNAIIS 98 (260)
T ss_pred HHHhcCCccEEEECcccc
Confidence 479999999854
No 125
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=98.90 E-value=6.5e-09 Score=99.29 Aligned_cols=79 Identities=19% Similarity=0.194 Sum_probs=67.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..+++|+||||++|+.+++.|++++ ..|.+.+|+.++++++.+.+. .++.++.+|++|.++++++++
T Consensus 6 ~~~vlItGa~g~iG~~la~~l~~~g-------~~v~~~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~ 74 (245)
T PRK12936 6 GRKALVTGASGGIGEEIARLLHAQG-------AIVGLHGTRVEKLEALAAELG----ERVKIFPANLSDRDEVKALGQKA 74 (245)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-------CEEEEEcCCHHHHHHHHHHhC----CceEEEEccCCCHHHHHHHHHHH
Confidence 4589999999999999999999998 788899999999888776552 367888999999999988764
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
++|+||||+|..
T Consensus 75 ~~~~~~id~vi~~ag~~ 91 (245)
T PRK12936 75 EADLEGVDILVNNAGIT 91 (245)
T ss_pred HHHcCCCCEEEECCCCC
Confidence 579999999864
No 126
>PRK07576 short chain dehydrogenase; Provisional
Probab=98.90 E-value=5.1e-09 Score=102.10 Aligned_cols=82 Identities=15% Similarity=0.119 Sum_probs=67.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~- 88 (452)
...++|+||+|+||+.++++|+++| ++|++++|+.+++++..+++.. ...++.++.+|++|++++++++++
T Consensus 9 ~k~ilItGasggIG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~i~~~~~~~ 80 (264)
T PRK07576 9 GKNVVVVGGTSGINLGIAQAFARAG-------ANVAVASRSQEKVDAAVAQLQQ-AGPEGLGVSADVRDYAAVEAAFAQI 80 (264)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHH-hCCceEEEECCCCCHHHHHHHHHHH
Confidence 3589999999999999999999988 7999999999888776655532 123567789999999999887764
Q ss_pred ------ccEEeecCCCC
Q 012947 89 ------TKLLLNCVGPY 99 (452)
Q Consensus 89 ------~dvVIn~aGp~ 99 (452)
+|+||||+|..
T Consensus 81 ~~~~~~iD~vi~~ag~~ 97 (264)
T PRK07576 81 ADEFGPIDVLVSGAAGN 97 (264)
T ss_pred HHHcCCCCEEEECCCCC
Confidence 69999999854
No 127
>PRK06197 short chain dehydrogenase; Provisional
Probab=98.89 E-value=5.1e-09 Score=104.33 Aligned_cols=84 Identities=19% Similarity=0.129 Sum_probs=69.1
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHc
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~-~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
+...++|+||+|+||+++++.|+++| ++|++++|+.+++++..+++.. ....++.++.+|++|.++++++++
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G-------~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~ 87 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKG-------AHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAAD 87 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHH
Confidence 34679999999999999999999998 7999999999887776655531 012357788999999999988776
Q ss_pred -------CccEEeecCCCC
Q 012947 88 -------QTKLLLNCVGPY 99 (452)
Q Consensus 88 -------~~dvVIn~aGp~ 99 (452)
+.|+||||||..
T Consensus 88 ~~~~~~~~iD~li~nAg~~ 106 (306)
T PRK06197 88 ALRAAYPRIDLLINNAGVM 106 (306)
T ss_pred HHHhhCCCCCEEEECCccc
Confidence 479999999964
No 128
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=98.89 E-value=1.6e-08 Score=99.33 Aligned_cols=114 Identities=15% Similarity=0.168 Sum_probs=83.2
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC--CCCCCccEEEEeCCCHHHHHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~--~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
..+.++|||++.+||+.+|+.|++.| .+|++++|+.+++++...++.. ....++..+.+|+++++.+++++
T Consensus 7 ~gkvalVTG~s~GIG~aia~~la~~G-------a~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~ 79 (270)
T KOG0725|consen 7 AGKVALVTGGSSGIGKAIALLLAKAG-------AKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLV 79 (270)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHH
Confidence 34679999999999999999999999 8999999999999888777642 11345788999999987776665
Q ss_pred c--------CccEEeecCCCCCCCCHHHHHHHHHhC--CcEEEecCcHHHHHHH
Q 012947 87 S--------QTKLLLNCVGPYRLHGDPVAAACVHSG--CDYLDISGEPEFMERM 130 (452)
Q Consensus 87 ~--------~~dvVIn~aGp~~~~~~~vv~ac~~~g--~~yvDlsge~~~~~~~ 130 (452)
+ +.|++|||||...... ++.+.-.+.. +.-+++.|....+...
T Consensus 80 ~~~~~~~~GkidiLvnnag~~~~~~-~~~~~s~e~~d~~~~~Nl~G~~~~~~~~ 132 (270)
T KOG0725|consen 80 EFAVEKFFGKIDILVNNAGALGLTG-SILDLSEEVFDKIMATNLRGSAFCLKQA 132 (270)
T ss_pred HHHHHHhCCCCCEEEEcCCcCCCCC-ChhhCCHHHHHHHHhhhchhHHHHHHHH
Confidence 4 5899999999765443 3344333332 3345555544444443
No 129
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=98.89 E-value=7e-09 Score=100.41 Aligned_cols=82 Identities=17% Similarity=0.224 Sum_probs=68.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..+++|+||+|++|+.++++|+++| ++|++++|+.++++.+.+++.. ...++.++.+|++|+++++++++
T Consensus 12 ~k~ilItGa~g~IG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~i~~-~~~~~~~~~~Dl~d~~~i~~~~~~~ 83 (259)
T PRK08213 12 GKTALVTGGSRGLGLQIAEALGEAG-------ARVVLSARKAEELEEAAAHLEA-LGIDALWIAADVADEADIERLAEET 83 (259)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHHHH
Confidence 3679999999999999999999988 7999999999888777766532 12456789999999999977665
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
..|+||||+|..
T Consensus 84 ~~~~~~id~vi~~ag~~ 100 (259)
T PRK08213 84 LERFGHVDILVNNAGAT 100 (259)
T ss_pred HHHhCCCCEEEECCCCC
Confidence 479999999853
No 130
>PRK07069 short chain dehydrogenase; Validated
Probab=98.88 E-value=5.8e-09 Score=100.10 Aligned_cols=82 Identities=20% Similarity=0.164 Sum_probs=65.2
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-hhHHHHHHHHhCCCC-CCCccEEEEeCCCHHHHHHHHc--
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-PTRVKQALQWASPSH-SLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-~~kl~~l~~~l~~~~-~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
+++|+||+|++|+.+++.|+++| ++|++++|+ .++++++.+++.... ...+..+.+|++|++++.++++
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 73 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQG-------AKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQA 73 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHH
Confidence 38999999999999999999998 899999998 777777766653201 1123457899999999987765
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
++|+||||+|...
T Consensus 74 ~~~~~~id~vi~~ag~~~ 91 (251)
T PRK07069 74 ADAMGGLSVLVNNAGVGS 91 (251)
T ss_pred HHHcCCccEEEECCCcCC
Confidence 4699999999654
No 131
>PRK09242 tropinone reductase; Provisional
Probab=98.88 E-value=8.1e-09 Score=99.88 Aligned_cols=83 Identities=23% Similarity=0.208 Sum_probs=69.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~-~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++|+||+|++|+.+++.|+++| ++|++++|+.++++++.+++... ...++..+.+|++|++++.++++
T Consensus 9 ~k~~lItGa~~gIG~~~a~~l~~~G-------~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 81 (257)
T PRK09242 9 GQTALITGASKGIGLAIAREFLGLG-------ADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDW 81 (257)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHH
Confidence 4689999999999999999999998 79999999999888877766321 12467788999999998877665
Q ss_pred ------CccEEeecCCCC
Q 012947 88 ------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (452)
+.|+|||++|..
T Consensus 82 ~~~~~g~id~li~~ag~~ 99 (257)
T PRK09242 82 VEDHWDGLHILVNNAGGN 99 (257)
T ss_pred HHHHcCCCCEEEECCCCC
Confidence 469999999863
No 132
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=98.88 E-value=7.6e-09 Score=99.31 Aligned_cols=80 Identities=21% Similarity=0.201 Sum_probs=63.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh-HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~-kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
..+++|+||+|++|+.++++|+++| ++|++.+|+.. ++.+..+++ ..++.++.+|++|++++.++++
T Consensus 5 ~k~vlItGas~gIG~~ia~~l~~~G-------~~vi~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~ 73 (248)
T TIGR01832 5 GKVALVTGANTGLGQGIAVGLAEAG-------ADIVGAGRSEPSETQQQVEAL----GRRFLSLTADLSDIEAIKALVDS 73 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEcCchHHHHHHHHHhc----CCceEEEECCCCCHHHHHHHHHH
Confidence 4589999999999999999999998 79999999753 233333332 2467889999999999987765
Q ss_pred ------CccEEeecCCCCC
Q 012947 88 ------QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (452)
+.|+||||+|...
T Consensus 74 ~~~~~~~~d~li~~ag~~~ 92 (248)
T TIGR01832 74 AVEEFGHIDILVNNAGIIR 92 (248)
T ss_pred HHHHcCCCCEEEECCCCCC
Confidence 4899999998643
No 133
>PRK07856 short chain dehydrogenase; Provisional
Probab=98.88 E-value=6.2e-09 Score=100.44 Aligned_cols=74 Identities=20% Similarity=0.237 Sum_probs=62.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~- 88 (452)
...++|+||+|++|+.++++|++++ ++|++++|+.++ +. ...++.++.+|++|++++++++++
T Consensus 6 ~k~~lItGas~gIG~~la~~l~~~g-------~~v~~~~r~~~~-----~~----~~~~~~~~~~D~~~~~~~~~~~~~~ 69 (252)
T PRK07856 6 GRVVLVTGGTRGIGAGIARAFLAAG-------ATVVVCGRRAPE-----TV----DGRPAEFHAADVRDPDQVAALVDAI 69 (252)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCChhh-----hh----cCCceEEEEccCCCHHHHHHHHHHH
Confidence 4689999999999999999999998 799999998765 11 124678899999999999888764
Q ss_pred ------ccEEeecCCCC
Q 012947 89 ------TKLLLNCVGPY 99 (452)
Q Consensus 89 ------~dvVIn~aGp~ 99 (452)
.|+||||+|..
T Consensus 70 ~~~~~~id~vi~~ag~~ 86 (252)
T PRK07856 70 VERHGRLDVLVNNAGGS 86 (252)
T ss_pred HHHcCCCCEEEECCCCC
Confidence 59999999964
No 134
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=98.88 E-value=6.4e-09 Score=100.77 Aligned_cols=81 Identities=23% Similarity=0.251 Sum_probs=66.5
Q ss_pred eEEEEcCCchHHHHHHHHHHH----cCCCCCCCceEEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHH
Q 012947 12 DVIILGASGFTGKYVVREALK----LFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~----~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~-~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
.++|+||+++||+.++++|++ .| ++|++++|+.++++++.+++... ...++.++.+|++|++++++++
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~ 74 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPG-------SVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLL 74 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCC-------cEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHH
Confidence 489999999999999999997 45 79999999999998888777421 1235778899999999998877
Q ss_pred cCc-----------cEEeecCCCC
Q 012947 87 SQT-----------KLLLNCVGPY 99 (452)
Q Consensus 87 ~~~-----------dvVIn~aGp~ 99 (452)
+.+ |+||||||..
T Consensus 75 ~~~~~~~g~~~~~~~~lv~nAG~~ 98 (256)
T TIGR01500 75 KALRELPRPKGLQRLLLINNAGTL 98 (256)
T ss_pred HHHHhccccCCCceEEEEeCCccc
Confidence 532 5899999964
No 135
>PRK08219 short chain dehydrogenase; Provisional
Probab=98.88 E-value=8.4e-09 Score=97.35 Aligned_cols=77 Identities=23% Similarity=0.280 Sum_probs=65.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
++++|+||+|++|+.++++|+++ ++|.+.+|+.++++++.++. ..+.++.+|++|++++.++++
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~--------~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~ 70 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT--------HTLLLGGRPAERLDELAAEL-----PGATPFPVDLTDPEAIAAAVEQLG 70 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh--------CCEEEEeCCHHHHHHHHHHh-----ccceEEecCCCCHHHHHHHHHhcC
Confidence 47999999999999999999976 37899999998877765543 257889999999999999887
Q ss_pred CccEEeecCCCCC
Q 012947 88 QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ~~dvVIn~aGp~~ 100 (452)
++|+|||++|...
T Consensus 71 ~id~vi~~ag~~~ 83 (227)
T PRK08219 71 RLDVLVHNAGVAD 83 (227)
T ss_pred CCCEEEECCCcCC
Confidence 5899999999753
No 136
>PRK08703 short chain dehydrogenase; Provisional
Probab=98.87 E-value=2.3e-08 Score=95.61 Aligned_cols=83 Identities=12% Similarity=0.175 Sum_probs=64.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCC--HHHHHHHH-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTD--PPSLHRLC- 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d--~~sl~~~~- 86 (452)
..+++|+||+|++|+.++++|+++| ++|++.+|+.++++++.+++.......+.++.+|+.| .+++.+++
T Consensus 6 ~k~vlItG~sggiG~~la~~l~~~g-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 78 (239)
T PRK08703 6 DKTILVTGASQGLGEQVAKAYAAAG-------ATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAA 78 (239)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHcC-------CEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHH
Confidence 3589999999999999999999988 7999999999988887776632112356678899875 34554443
Q ss_pred -------cCccEEeecCCCC
Q 012947 87 -------SQTKLLLNCVGPY 99 (452)
Q Consensus 87 -------~~~dvVIn~aGp~ 99 (452)
...|+||||+|..
T Consensus 79 ~i~~~~~~~id~vi~~ag~~ 98 (239)
T PRK08703 79 TIAEATQGKLDGIVHCAGYF 98 (239)
T ss_pred HHHHHhCCCCCEEEEecccc
Confidence 3579999999953
No 137
>PRK12367 short chain dehydrogenase; Provisional
Probab=98.87 E-value=2.6e-08 Score=96.42 Aligned_cols=106 Identities=12% Similarity=0.003 Sum_probs=73.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
..++|+||+|++|+.+++.|+++| ++|++.+|+.....+. .. ......+.+|++|.+++.+.+.+.|
T Consensus 15 k~~lITGas~gIG~ala~~l~~~G-------~~Vi~~~r~~~~~~~~--~~----~~~~~~~~~D~~~~~~~~~~~~~iD 81 (245)
T PRK12367 15 KRIGITGASGALGKALTKAFRAKG-------AKVIGLTHSKINNSES--ND----ESPNEWIKWECGKEESLDKQLASLD 81 (245)
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCC-------CEEEEEECCchhhhhh--hc----cCCCeEEEeeCCCHHHHHHhcCCCC
Confidence 579999999999999999999998 7999999987322111 11 1122578899999999999999999
Q ss_pred EEeecCCCCCCC--CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHH
Q 012947 91 LLLNCVGPYRLH--GDPVAAACVHSGCDYLDISGEPEFMERMEARY 134 (452)
Q Consensus 91 vVIn~aGp~~~~--~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~ 134 (452)
++|||||..... .....+... .+|+.+....++.+.+.+
T Consensus 82 ilVnnAG~~~~~~~~~~~~~~~~-----~vN~~g~~~l~~~~~~~m 122 (245)
T PRK12367 82 VLILNHGINPGGRQDPENINKAL-----EINALSSWRLLELFEDIA 122 (245)
T ss_pred EEEECCccCCcCCCCHHHHHHHH-----HHHhHHHHHHHHHHHHHH
Confidence 999999964321 111222222 245555566666665544
No 138
>PRK08862 short chain dehydrogenase; Provisional
Probab=98.87 E-value=8e-09 Score=98.79 Aligned_cols=81 Identities=15% Similarity=0.167 Sum_probs=68.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||++.+|+.+++.|+++| ++|++.+|+.++++++.+++.. ...++..+.+|+.|+++++++++
T Consensus 5 ~k~~lVtGas~GIG~aia~~la~~G-------~~V~~~~r~~~~l~~~~~~i~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 76 (227)
T PRK08862 5 SSIILITSAGSVLGRTISCHFARLG-------ATLILCDQDQSALKDTYEQCSA-LTDNVYSFQLKDFSQESIRHLFDAI 76 (227)
T ss_pred CeEEEEECCccHHHHHHHHHHHHCC-------CEEEEEcCCHHHHHHHHHHHHh-cCCCeEEEEccCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 7999999999999888776642 12356678899999999987653
Q ss_pred ------CccEEeecCCC
Q 012947 88 ------QTKLLLNCVGP 98 (452)
Q Consensus 88 ------~~dvVIn~aGp 98 (452)
+.|++|||+|.
T Consensus 77 ~~~~g~~iD~li~nag~ 93 (227)
T PRK08862 77 EQQFNRAPDVLVNNWTS 93 (227)
T ss_pred HHHhCCCCCEEEECCcc
Confidence 57999999984
No 139
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=98.87 E-value=5.9e-09 Score=100.24 Aligned_cols=102 Identities=20% Similarity=0.366 Sum_probs=81.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
.-+.|+|||||+|+.++..|++.| -++++--|..+---..++-++ +.+++-+...|+.|+++++++++..+
T Consensus 62 iVaTVFGAtGFlGryvvnklak~G-------SQviiPyR~d~~~~r~lkvmG--dLGQvl~~~fd~~DedSIr~vvk~sN 132 (391)
T KOG2865|consen 62 IVATVFGATGFLGRYVVNKLAKMG-------SQVIIPYRGDEYDPRHLKVMG--DLGQVLFMKFDLRDEDSIRAVVKHSN 132 (391)
T ss_pred eEEEEecccccccHHHHHHHhhcC-------CeEEEeccCCccchhheeecc--cccceeeeccCCCCHHHHHHHHHhCc
Confidence 457899999999999999999999 689999986543322233333 34688899999999999999999999
Q ss_pred EEeecCCCCCCC------------CHHHHHHHHHhCC-cEEEec
Q 012947 91 LLLNCVGPYRLH------------GDPVAAACVHSGC-DYLDIS 121 (452)
Q Consensus 91 vVIn~aGp~~~~------------~~~vv~ac~~~g~-~yvDls 121 (452)
||||..|--..+ .+.+++.|.+.|+ .||++|
T Consensus 133 VVINLIGrd~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS 176 (391)
T KOG2865|consen 133 VVINLIGRDYETKNFSFEDVNVHIAERLARICKEAGVERFIHVS 176 (391)
T ss_pred EEEEeeccccccCCcccccccchHHHHHHHHHHhhChhheeehh
Confidence 999999953222 1778888888888 588776
No 140
>PRK08278 short chain dehydrogenase; Provisional
Probab=98.87 E-value=8e-09 Score=101.27 Aligned_cols=81 Identities=15% Similarity=0.107 Sum_probs=64.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhH-------HHHHHHHhCCCCCCCccEEEEeCCCHHHHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR-------VKQALQWASPSHSLSIPILTADTTDPPSLH 83 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~k-------l~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~ 83 (452)
..++|+||+|++|+.++++|+++| ++|++.+|+.++ ++++.+++.. ...++.++.+|++|++++.
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~D~~~~~~i~ 78 (273)
T PRK08278 7 KTLFITGASRGIGLAIALRAARDG-------ANIVIAAKTAEPHPKLPGTIHTAAEEIEA-AGGQALPLVGDVRDEDQVA 78 (273)
T ss_pred CEEEEECCCchHHHHHHHHHHHCC-------CEEEEEecccccccchhhHHHHHHHHHHh-cCCceEEEEecCCCHHHHH
Confidence 479999999999999999999998 799999997653 4444444421 1346778899999999998
Q ss_pred HHHc-------CccEEeecCCCC
Q 012947 84 RLCS-------QTKLLLNCVGPY 99 (452)
Q Consensus 84 ~~~~-------~~dvVIn~aGp~ 99 (452)
++++ +.|+||||+|..
T Consensus 79 ~~~~~~~~~~g~id~li~~ag~~ 101 (273)
T PRK08278 79 AAVAKAVERFGGIDICVNNASAI 101 (273)
T ss_pred HHHHHHHHHhCCCCEEEECCCCc
Confidence 8776 579999999854
No 141
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=98.87 E-value=1.1e-08 Score=98.14 Aligned_cols=81 Identities=16% Similarity=0.128 Sum_probs=65.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEE-ecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~ia-gR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
.+++|+||+|++|+.++++|++++ ++++++ .|+.++++.+.+++.. ...++.++.+|++|+++++++++
T Consensus 3 k~ilItGas~giG~~la~~l~~~g-------~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~ 74 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARG-------WSVGINYARDAAAAEETADAVRA-AGGRACVVAGDVANEADVIAMFDAV 74 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCC-------CEEEEEeCCCHHHHHHHHHHHHh-cCCcEEEEEeccCCHHHHHHHHHHH
Confidence 379999999999999999999998 677765 4677777776665532 12467899999999999887765
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
++|+||||+|..
T Consensus 75 ~~~~~~id~li~~ag~~ 91 (248)
T PRK06947 75 QSAFGRLDALVNNAGIV 91 (248)
T ss_pred HHhcCCCCEEEECCccC
Confidence 589999999964
No 142
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=98.86 E-value=1.1e-08 Score=99.22 Aligned_cols=82 Identities=15% Similarity=0.049 Sum_probs=65.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh-hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~-~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++|+||+|++|+.+++.|+++| +++++..|+. ++++.+.+++.. ...++.++.+|++|.+++.++++
T Consensus 7 ~k~~lItGa~~gIG~~ia~~l~~~G-------~~vvi~~~~~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~i~~~~~~ 78 (261)
T PRK08936 7 GKVVVITGGSTGLGRAMAVRFGKEK-------AKVVINYRSDEEEANDVAEEIKK-AGGEAIAVKGDVTVESDVVNLIQT 78 (261)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCC-------CEEEEEeCCCHHHHHHHHHHHHH-cCCeEEEEEecCCCHHHHHHHHHH
Confidence 4689999999999999999999998 7888888854 455555555431 12456788999999999888775
Q ss_pred ------CccEEeecCCCC
Q 012947 88 ------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (452)
++|+|||++|..
T Consensus 79 ~~~~~g~id~lv~~ag~~ 96 (261)
T PRK08936 79 AVKEFGTLDVMINNAGIE 96 (261)
T ss_pred HHHHcCCCCEEEECCCCC
Confidence 479999999964
No 143
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=98.86 E-value=2e-08 Score=95.98 Aligned_cols=92 Identities=25% Similarity=0.352 Sum_probs=72.9
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhH--HHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR--VKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 13 ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~k--l~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
|+|+||||.+|+.+++.|++.+ ++|.++.|+..+ .+++ +. ..+.++.+|++|+++|.++++++|
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~-------~~V~~l~R~~~~~~~~~l-~~------~g~~vv~~d~~~~~~l~~al~g~d 66 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAG-------FSVRALVRDPSSDRAQQL-QA------LGAEVVEADYDDPESLVAALKGVD 66 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT-------GCEEEEESSSHHHHHHHH-HH------TTTEEEES-TT-HHHHHHHHTTCS
T ss_pred CEEECCccHHHHHHHHHHHhCC-------CCcEEEEeccchhhhhhh-hc------ccceEeecccCCHHHHHHHHcCCc
Confidence 7999999999999999999966 899999998743 2222 22 256888999999999999999999
Q ss_pred EEeecCCCCCC----CCHHHHHHHHHhCCc-EE
Q 012947 91 LLLNCVGPYRL----HGDPVAAACVHSGCD-YL 118 (452)
Q Consensus 91 vVIn~aGp~~~----~~~~vv~ac~~~g~~-yv 118 (452)
+||.+.++... ...++++||.+.|+. +|
T Consensus 67 ~v~~~~~~~~~~~~~~~~~li~Aa~~agVk~~v 99 (233)
T PF05368_consen 67 AVFSVTPPSHPSELEQQKNLIDAAKAAGVKHFV 99 (233)
T ss_dssp EEEEESSCSCCCHHHHHHHHHHHHHHHT-SEEE
T ss_pred eEEeecCcchhhhhhhhhhHHHhhhccccceEE
Confidence 99999986532 236799999999995 44
No 144
>PRK06914 short chain dehydrogenase; Provisional
Probab=98.86 E-value=8.1e-09 Score=101.15 Aligned_cols=82 Identities=27% Similarity=0.233 Sum_probs=66.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~-~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..++|+||||++|+.+++.|+++| ++|++++|+.++++++.+++.. ....++.++.+|++|++++++ ++
T Consensus 4 k~~lItGasg~iG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~ 75 (280)
T PRK06914 4 KIAIVTGASSGFGLLTTLELAKKG-------YLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLV 75 (280)
T ss_pred CEEEEECCCchHHHHHHHHHHhCC-------CEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHH
Confidence 369999999999999999999998 8999999999888777655432 012467889999999998876 43
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
++|+||||+|...
T Consensus 76 ~~~~~~id~vv~~ag~~~ 93 (280)
T PRK06914 76 LKEIGRIDLLVNNAGYAN 93 (280)
T ss_pred HHhcCCeeEEEECCcccc
Confidence 4699999998643
No 145
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=98.85 E-value=1e-08 Score=101.00 Aligned_cols=94 Identities=12% Similarity=0.080 Sum_probs=76.3
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH-----
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC----- 86 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~----- 86 (452)
+|+|+||||++|++++++|++.+ ++|.++.|+.++.+ ..++..+.+|++|++++.+++
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g-------~~V~~~~R~~~~~~----------~~~~~~~~~d~~d~~~l~~a~~~~~~ 63 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAAS-------VPFLVASRSSSSSA----------GPNEKHVKFDWLDEDTWDNPFSSDDG 63 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCC-------CcEEEEeCCCcccc----------CCCCccccccCCCHHHHHHHHhcccC
Confidence 48999999999999999999988 79999999987642 125667789999999999998
Q ss_pred -cC-ccEEeecCCCCCC---CCHHHHHHHHHhCC-cEEEecC
Q 012947 87 -SQ-TKLLLNCVGPYRL---HGDPVAAACVHSGC-DYLDISG 122 (452)
Q Consensus 87 -~~-~dvVIn~aGp~~~---~~~~vv~ac~~~g~-~yvDlsg 122 (452)
++ +|.|++++++... ...+++++|.+.|+ |+|.+|.
T Consensus 64 ~~g~~d~v~~~~~~~~~~~~~~~~~i~aa~~~gv~~~V~~Ss 105 (285)
T TIGR03649 64 MEPEISAVYLVAPPIPDLAPPMIKFIDFARSKGVRRFVLLSA 105 (285)
T ss_pred cCCceeEEEEeCCCCCChhHHHHHHHHHHHHcCCCEEEEeec
Confidence 56 9999999875422 12578899999988 5666653
No 146
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=98.85 E-value=1.2e-08 Score=101.87 Aligned_cols=75 Identities=27% Similarity=0.449 Sum_probs=64.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
++|+|+||+||+|+++++.|++++ ++|.+.+|+.++...+. ...+.++.+|+.|.+++.++++++|
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~-------~~~~~~~~~D~~~~~~l~~~~~~~d 66 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQG-------EEVRVLVRPTSDRRNLE-------GLDVEIVEGDLRDPASLRKAVAGCR 66 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCC-------CEEEEEEecCccccccc-------cCCceEEEeeCCCHHHHHHHHhCCC
Confidence 369999999999999999999998 79999999877643221 2357889999999999999999999
Q ss_pred EEeecCCCC
Q 012947 91 LLLNCVGPY 99 (452)
Q Consensus 91 vVIn~aGp~ 99 (452)
+|||+++..
T Consensus 67 ~vi~~a~~~ 75 (328)
T TIGR03466 67 ALFHVAADY 75 (328)
T ss_pred EEEEeceec
Confidence 999999864
No 147
>PRK12747 short chain dehydrogenase; Provisional
Probab=98.85 E-value=1.1e-08 Score=98.52 Aligned_cols=82 Identities=15% Similarity=0.061 Sum_probs=63.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEe-cChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAG-RNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iag-R~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++|+||+|+||+++++.|++.| ++|++.. |+.++++++..++.. ....+..+.+|++|.+++..+++
T Consensus 4 ~k~~lItGas~gIG~~ia~~l~~~G-------~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~ 75 (252)
T PRK12747 4 GKVALVTGASRGIGRAIAKRLANDG-------ALVAIHYGNRKEEAEETVYEIQS-NGGSAFSIGANLESLHGVEALYSS 75 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCC-------CeEEEEcCCCHHHHHHHHHHHHh-cCCceEEEecccCCHHHHHHHHHH
Confidence 3589999999999999999999998 7888864 667777766665532 12356678899999887765442
Q ss_pred ------------CccEEeecCCCC
Q 012947 88 ------------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------------~~dvVIn~aGp~ 99 (452)
+.|+||||||..
T Consensus 76 ~~~~~~~~~g~~~id~lv~~Ag~~ 99 (252)
T PRK12747 76 LDNELQNRTGSTKFDILINNAGIG 99 (252)
T ss_pred HHHHhhhhcCCCCCCEEEECCCcC
Confidence 589999999953
No 148
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=98.85 E-value=4e-08 Score=95.14 Aligned_cols=80 Identities=24% Similarity=0.272 Sum_probs=65.3
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCC-HHHHHHHH
Q 012947 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTD-PPSLHRLC 86 (452)
Q Consensus 8 ~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d-~~sl~~~~ 86 (452)
.+.++|+|+||||++|+.++++|++++ ++|++..|+.+++++...+ ..++.++.+|++| .+++.+.+
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~~g-------~~V~~~~R~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~~l~~~~ 82 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLAKG-------FAVKAGVRDVDKAKTSLPQ-----DPSLQIVRADVTEGSDKLVEAI 82 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhCC-------CEEEEEecCHHHHHHhccc-----CCceEEEEeeCCCCHHHHHHHh
Confidence 345789999999999999999999987 7999999998876544321 2357889999998 47787777
Q ss_pred -cCccEEeecCCCC
Q 012947 87 -SQTKLLLNCVGPY 99 (452)
Q Consensus 87 -~~~dvVIn~aGp~ 99 (452)
.++|+||+++|..
T Consensus 83 ~~~~d~vi~~~g~~ 96 (251)
T PLN00141 83 GDDSDAVICATGFR 96 (251)
T ss_pred hcCCCEEEECCCCC
Confidence 6899999998853
No 149
>PRK07074 short chain dehydrogenase; Provisional
Probab=98.85 E-value=1.5e-08 Score=97.85 Aligned_cols=79 Identities=16% Similarity=0.161 Sum_probs=68.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~-- 88 (452)
.+++|+||||++|+.++++|+++| ++|++.+|+.++++.+.+++. ..++.++.+|+.|++++.+++++
T Consensus 3 k~ilItGat~~iG~~la~~L~~~g-------~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~ 72 (257)
T PRK07074 3 RTALVTGAAGGIGQALARRFLAAG-------DRVLALDIDAAALAAFADALG---DARFVPVACDLTDAASLAAALANAA 72 (257)
T ss_pred CEEEEECCcchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhc---CCceEEEEecCCCHHHHHHHHHHHH
Confidence 369999999999999999999988 799999999999888877663 34678899999999999887763
Q ss_pred -----ccEEeecCCCC
Q 012947 89 -----TKLLLNCVGPY 99 (452)
Q Consensus 89 -----~dvVIn~aGp~ 99 (452)
.|+|||++|..
T Consensus 73 ~~~~~~d~vi~~ag~~ 88 (257)
T PRK07074 73 AERGPVDVLVANAGAA 88 (257)
T ss_pred HHcCCCCEEEECCCCC
Confidence 79999999864
No 150
>PRK06483 dihydromonapterin reductase; Provisional
Probab=98.85 E-value=8.3e-09 Score=98.51 Aligned_cols=76 Identities=13% Similarity=0.152 Sum_probs=62.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++|+||+|++|+.+++.|+++| ++|++.+|+.++..+..+.. .+.++.+|++|+++++++++
T Consensus 3 k~vlItGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~ 69 (236)
T PRK06483 3 APILITGAGQRIGLALAWHLLAQG-------QPVIVSYRTHYPAIDGLRQA------GAQCIQADFSTNAGIMAFIDELK 69 (236)
T ss_pred ceEEEECCCChHHHHHHHHHHHCC-------CeEEEEeCCchhHHHHHHHc------CCEEEEcCCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 89999999886654333322 35788999999999887765
Q ss_pred ----CccEEeecCCCC
Q 012947 88 ----QTKLLLNCVGPY 99 (452)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (452)
+.|+||||+|..
T Consensus 70 ~~~~~id~lv~~ag~~ 85 (236)
T PRK06483 70 QHTDGLRAIIHNASDW 85 (236)
T ss_pred hhCCCccEEEECCccc
Confidence 379999999854
No 151
>PRK05693 short chain dehydrogenase; Provisional
Probab=98.85 E-value=1.2e-08 Score=99.89 Aligned_cols=74 Identities=20% Similarity=0.189 Sum_probs=63.6
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc----
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~---- 87 (452)
.++|+||+|++|+.+++.|+++| ++|++.+|+.++++.+.+ .++..+.+|++|+++++++++
T Consensus 3 ~vlItGasggiG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~-------~~~~~~~~Dl~~~~~~~~~~~~~~~ 68 (274)
T PRK05693 3 VVLITGCSSGIGRALADAFKAAG-------YEVWATARKAEDVEALAA-------AGFTAVQLDVNDGAALARLAEELEA 68 (274)
T ss_pred EEEEecCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHH-------CCCeEEEeeCCCHHHHHHHHHHHHH
Confidence 69999999999999999999988 899999999988766543 246788999999999988775
Q ss_pred ---CccEEeecCCCC
Q 012947 88 ---QTKLLLNCVGPY 99 (452)
Q Consensus 88 ---~~dvVIn~aGp~ 99 (452)
++|+||||+|..
T Consensus 69 ~~~~id~vi~~ag~~ 83 (274)
T PRK05693 69 EHGGLDVLINNAGYG 83 (274)
T ss_pred hcCCCCEEEECCCCC
Confidence 579999999854
No 152
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.84 E-value=9.5e-09 Score=98.16 Aligned_cols=81 Identities=20% Similarity=0.191 Sum_probs=68.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEE-ecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~ia-gR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
.+++|+||||++|+.+++.|++++ ++++++ +|+.++++.+.+.+.. ...++.++.+|++|++++.++++
T Consensus 6 ~~ilI~Gasg~iG~~la~~l~~~g-------~~v~~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 77 (247)
T PRK05565 6 KVAIVTGASGGIGRAIAELLAKEG-------AKVVIAYDINEEAAQELLEEIKE-EGGDAIAVKADVSSEEDVENLVEQI 77 (247)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEcCCCHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHH
Confidence 479999999999999999999988 788888 9998888777666532 12457889999999999988776
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
++|+|||++|..
T Consensus 78 ~~~~~~id~vi~~ag~~ 94 (247)
T PRK05565 78 VEKFGKIDILVNNAGIS 94 (247)
T ss_pred HHHhCCCCEEEECCCcC
Confidence 689999999975
No 153
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.84 E-value=1.3e-08 Score=98.18 Aligned_cols=81 Identities=16% Similarity=0.119 Sum_probs=64.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh-hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~-~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..++|+||+|++|+.+++.|++++ ++|++.+|+. +++++..+.+.. ...++.++.+|++|++++.++++
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g-------~~vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 74 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAG-------FDLAINDRPDDEELAATQQELRA-LGVEVIFFPADVADLSAHEAMLDAA 74 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEecCchhHHHHHHHHHHh-cCCceEEEEecCCCHHHHHHHHHHH
Confidence 469999999999999999999998 7899999864 455555554421 12467889999999999887765
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
.+|+||||+|..
T Consensus 75 ~~~~~~id~vi~~ag~~ 91 (256)
T PRK12745 75 QAAWGRIDCLVNNAGVG 91 (256)
T ss_pred HHhcCCCCEEEECCccC
Confidence 579999999853
No 154
>PRK12827 short chain dehydrogenase; Provisional
Probab=98.84 E-value=1.6e-08 Score=96.75 Aligned_cols=83 Identities=14% Similarity=0.044 Sum_probs=65.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec----ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR----NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR----~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
.++++|+||+|++|+.++++|++++ +++++.+| +.++++++.+++.. ...++.++.+|++|+++++++
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~g-------~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~ 77 (249)
T PRK12827 6 SRRVLITGGSGGLGRAIAVRLAADG-------ADVIVLDIHPMRGRAEADAVAAGIEA-AGGKALGLAFDVRDFAATRAA 77 (249)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-------CeEEEEcCcccccHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHH
Confidence 3689999999999999999999998 78888654 45566665555531 134678899999999999888
Q ss_pred Hc-------CccEEeecCCCCC
Q 012947 86 CS-------QTKLLLNCVGPYR 100 (452)
Q Consensus 86 ~~-------~~dvVIn~aGp~~ 100 (452)
++ ++|+|||++|...
T Consensus 78 ~~~~~~~~~~~d~vi~~ag~~~ 99 (249)
T PRK12827 78 LDAGVEEFGRLDILVNNAGIAT 99 (249)
T ss_pred HHHHHHHhCCCCEEEECCCCCC
Confidence 74 5799999999654
No 155
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.84 E-value=2.4e-08 Score=104.62 Aligned_cols=108 Identities=19% Similarity=0.233 Sum_probs=88.2
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHc
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~-~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
...+|+||||+|-+|+.+|+++++.+| .++++.+|++-++.....++... ...++..+.+|+.|.+.+.++++
T Consensus 249 ~gK~vLVTGagGSiGsel~~qil~~~p------~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~ 322 (588)
T COG1086 249 TGKTVLVTGGGGSIGSELCRQILKFNP------KEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAME 322 (588)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHhcCC------CEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHh
Confidence 356899999999999999999999986 69999999999998887777531 13567888999999999999999
Q ss_pred C--ccEEeecCCC----CCCC------------CHHHHHHHHHhCC-cEEEecC
Q 012947 88 Q--TKLLLNCVGP----YRLH------------GDPVAAACVHSGC-DYLDISG 122 (452)
Q Consensus 88 ~--~dvVIn~aGp----~~~~------------~~~vv~ac~~~g~-~yvDlsg 122 (452)
+ +|+|+|+|.- ...+ .+++++||.++|+ ++|-+|.
T Consensus 323 ~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iST 376 (588)
T COG1086 323 GHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLIST 376 (588)
T ss_pred cCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEec
Confidence 8 9999999972 1111 1778888888888 4666654
No 156
>PRK07035 short chain dehydrogenase; Provisional
Probab=98.84 E-value=3.1e-08 Score=95.37 Aligned_cols=81 Identities=11% Similarity=0.071 Sum_probs=68.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|+||++++++|+++| ++|++++|+.++++++.+++.. ...++.++.+|+.|.++++++++
T Consensus 8 ~k~vlItGas~gIG~~l~~~l~~~G-------~~Vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 79 (252)
T PRK07035 8 GKIALVTGASRGIGEAIAKLLAQQG-------AHVIVSSRKLDGCQAVADAIVA-AGGKAEALACHIGEMEQIDALFAHI 79 (252)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 7999999999888887776632 12356788999999999887766
Q ss_pred -----CccEEeecCCC
Q 012947 88 -----QTKLLLNCVGP 98 (452)
Q Consensus 88 -----~~dvVIn~aGp 98 (452)
+.|+|||++|.
T Consensus 80 ~~~~~~id~li~~ag~ 95 (252)
T PRK07035 80 RERHGRLDILVNNAAA 95 (252)
T ss_pred HHHcCCCCEEEECCCc
Confidence 47999999985
No 157
>PRK08628 short chain dehydrogenase; Provisional
Probab=98.83 E-value=1.1e-08 Score=98.81 Aligned_cols=81 Identities=15% Similarity=0.047 Sum_probs=67.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|++|+.++++|+++| .++++++|+++++ ++.+++.. ...++.++.+|++|++++.++++
T Consensus 7 ~~~ilItGasggiG~~la~~l~~~G-------~~v~~~~r~~~~~-~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 77 (258)
T PRK08628 7 DKVVIVTGGASGIGAAISLRLAEEG-------AIPVIFGRSAPDD-EFAEELRA-LQPRAEFVQVDLTDDAQCRDAVEQT 77 (258)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHcC-------CcEEEEcCChhhH-HHHHHHHh-cCCceEEEEccCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 7899999998877 55555431 13467889999999999988876
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
.+|+||||+|..
T Consensus 78 ~~~~~~id~vi~~ag~~ 94 (258)
T PRK08628 78 VAKFGRIDGLVNNAGVN 94 (258)
T ss_pred HHhcCCCCEEEECCccc
Confidence 479999999953
No 158
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=98.83 E-value=2e-08 Score=103.10 Aligned_cols=79 Identities=11% Similarity=0.078 Sum_probs=63.4
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 7 ~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
+.++++|+|+|||||+|++++++|.++| ++|.+++|..... .... ...+.++.+|+.|.+.+.+++
T Consensus 18 ~~~~~~IlVtGgtGfIG~~l~~~L~~~G-------~~V~~v~r~~~~~---~~~~----~~~~~~~~~Dl~d~~~~~~~~ 83 (370)
T PLN02695 18 PSEKLRICITGAGGFIASHIARRLKAEG-------HYIIASDWKKNEH---MSED----MFCHEFHLVDLRVMENCLKVT 83 (370)
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHhCC-------CEEEEEEeccccc---cccc----cccceEEECCCCCHHHHHHHH
Confidence 4467899999999999999999999988 7999999864321 1100 113567889999999999999
Q ss_pred cCccEEeecCCCC
Q 012947 87 SQTKLLLNCVGPY 99 (452)
Q Consensus 87 ~~~dvVIn~aGp~ 99 (452)
+++|+|||+|+..
T Consensus 84 ~~~D~Vih~Aa~~ 96 (370)
T PLN02695 84 KGVDHVFNLAADM 96 (370)
T ss_pred hCCCEEEEccccc
Confidence 9999999999754
No 159
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=98.83 E-value=1.5e-08 Score=111.75 Aligned_cols=79 Identities=16% Similarity=0.173 Sum_probs=62.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHH-HHHHHc
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPS-LHRLCS 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~s-l~~~~~ 87 (452)
+.++|+|||||||+|++++++|++++. ++|++.+|+..+...+.. ..++.++.+|++|.++ ++++++
T Consensus 314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g------~~V~~l~r~~~~~~~~~~------~~~~~~~~gDl~d~~~~l~~~l~ 381 (660)
T PRK08125 314 RRTRVLILGVNGFIGNHLTERLLRDDN------YEVYGLDIGSDAISRFLG------HPRFHFVEGDISIHSEWIEYHIK 381 (660)
T ss_pred cCCEEEEECCCchHHHHHHHHHHhCCC------cEEEEEeCCchhhhhhcC------CCceEEEeccccCcHHHHHHHhc
Confidence 457899999999999999999998631 799999998765433211 2357889999998655 677889
Q ss_pred CccEEeecCCCC
Q 012947 88 QTKLLLNCVGPY 99 (452)
Q Consensus 88 ~~dvVIn~aGp~ 99 (452)
++|+|||+|+..
T Consensus 382 ~~D~ViHlAa~~ 393 (660)
T PRK08125 382 KCDVVLPLVAIA 393 (660)
T ss_pred CCCEEEECcccc
Confidence 999999999743
No 160
>PRK08226 short chain dehydrogenase; Provisional
Probab=98.83 E-value=1.1e-08 Score=99.05 Aligned_cols=81 Identities=20% Similarity=0.165 Sum_probs=64.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..+++|+||+|++|+.++++|+++| ++|++++|+.+. ++..+++.. ...++.++.+|++|+++++++++
T Consensus 6 ~~~~lItG~s~giG~~la~~l~~~G-------~~Vv~~~r~~~~-~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~ 76 (263)
T PRK08226 6 GKTALITGALQGIGEGIARVFARHG-------ANLILLDISPEI-EKLADELCG-RGHRCTAVVADVRDPASVAAAIKRA 76 (263)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCC-------CEEEEecCCHHH-HHHHHHHHH-hCCceEEEECCCCCHHHHHHHHHHH
Confidence 3589999999999999999999998 799999998753 333333321 12456788999999999988876
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
+.|+||||+|..
T Consensus 77 ~~~~~~id~vi~~ag~~ 93 (263)
T PRK08226 77 KEKEGRIDILVNNAGVC 93 (263)
T ss_pred HHHcCCCCEEEECCCcC
Confidence 469999999964
No 161
>PRK06484 short chain dehydrogenase; Validated
Probab=98.83 E-value=1.1e-08 Score=109.44 Aligned_cols=78 Identities=19% Similarity=0.232 Sum_probs=68.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+++||+.+++.|+++| ++|++++|+.++++++.++++ .++..+.+|++|+++++++++
T Consensus 5 ~k~~lITGas~gIG~aia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~ 73 (520)
T PRK06484 5 SRVVLVTGAAGGIGRAACQRFARAG-------DQVVVADRNVERARERADSLG----PDHHALAMDVSDEAQIREGFEQL 73 (520)
T ss_pred CeEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhC----CceeEEEeccCCHHHHHHHHHHH
Confidence 3579999999999999999999998 799999999999988887763 356788999999999888775
Q ss_pred -----CccEEeecCCC
Q 012947 88 -----QTKLLLNCVGP 98 (452)
Q Consensus 88 -----~~dvVIn~aGp 98 (452)
+.|+||||+|.
T Consensus 74 ~~~~g~iD~li~nag~ 89 (520)
T PRK06484 74 HREFGRIDVLVNNAGV 89 (520)
T ss_pred HHHhCCCCEEEECCCc
Confidence 47999999986
No 162
>PRK08177 short chain dehydrogenase; Provisional
Probab=98.83 E-value=2.9e-08 Score=94.19 Aligned_cols=77 Identities=25% Similarity=0.204 Sum_probs=64.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++|+||+|++|+.++++|+++| ++|++++|+.++.+++. ++ .++.++.+|++|+++++++++
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~-~~-----~~~~~~~~D~~d~~~~~~~~~~~~ 68 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERG-------WQVTATVRGPQQDTALQ-AL-----PGVHIEKLDMNDPASLDQLLQRLQ 68 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCC-------CEEEEEeCCCcchHHHH-hc-----cccceEEcCCCCHHHHHHHHHHhh
Confidence 369999999999999999999998 79999999988765543 22 356788899999999988877
Q ss_pred --CccEEeecCCCCC
Q 012947 88 --QTKLLLNCVGPYR 100 (452)
Q Consensus 88 --~~dvVIn~aGp~~ 100 (452)
++|+|||++|...
T Consensus 69 ~~~id~vi~~ag~~~ 83 (225)
T PRK08177 69 GQRFDLLFVNAGISG 83 (225)
T ss_pred cCCCCEEEEcCcccC
Confidence 4799999998753
No 163
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.83 E-value=2.5e-08 Score=98.17 Aligned_cols=78 Identities=15% Similarity=0.149 Sum_probs=62.5
Q ss_pred CCeEEEEcCC--chHHHHHHHHHHHcCCCCCCCceEEEEEecCh---hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 012947 10 LFDVIILGAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRNP---TRVKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (452)
Q Consensus 10 ~~~ilV~GAT--G~iG~~va~~L~~~g~~~~~~~~~v~iagR~~---~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~ 84 (452)
...++|+||+ ++||+.+++.|+++| ++|++.+|+. ++++++.++++ .. .++.+|++|++++++
T Consensus 5 ~k~~lItGas~~~GIG~aiA~~la~~G-------~~Vil~~r~~~~~~~~~~~~~~~~----~~-~~~~~Dv~d~~~v~~ 72 (274)
T PRK08415 5 GKKGLIVGVANNKSIAYGIAKACFEQG-------AELAFTYLNEALKKRVEPIAQELG----SD-YVYELDVSKPEHFKS 72 (274)
T ss_pred CcEEEEECCCCCCCHHHHHHHHHHHCC-------CEEEEEecCHHHHHHHHHHHHhcC----Cc-eEEEecCCCHHHHHH
Confidence 3579999997 799999999999998 8999999985 34444444442 23 578899999999988
Q ss_pred HHc-------CccEEeecCCCC
Q 012947 85 LCS-------QTKLLLNCVGPY 99 (452)
Q Consensus 85 ~~~-------~~dvVIn~aGp~ 99 (452)
+++ +.|+||||||..
T Consensus 73 ~~~~i~~~~g~iDilVnnAG~~ 94 (274)
T PRK08415 73 LAESLKKDLGKIDFIVHSVAFA 94 (274)
T ss_pred HHHHHHHHcCCCCEEEECCccC
Confidence 775 469999999964
No 164
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.83 E-value=2e-08 Score=100.29 Aligned_cols=83 Identities=12% Similarity=0.105 Sum_probs=67.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++|+||+|+||+.++++|+++| .+|++.+|+ .++++++.+++.. ...++.++.+|++|++++.++++
T Consensus 12 ~k~~lVTGas~gIG~~ia~~L~~~G-------a~Vv~~~~~~~~~~~~~~~~i~~-~g~~~~~~~~Dv~d~~~~~~~~~~ 83 (306)
T PRK07792 12 GKVAVVTGAAAGLGRAEALGLARLG-------ATVVVNDVASALDASDVLDEIRA-AGAKAVAVAGDISQRATADELVAT 83 (306)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-------CEEEEecCCchhHHHHHHHHHHh-cCCeEEEEeCCCCCHHHHHHHHHH
Confidence 4679999999999999999999998 789998875 4556666665532 13467789999999999988876
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
++|+||||||...
T Consensus 84 ~~~~g~iD~li~nAG~~~ 101 (306)
T PRK07792 84 AVGLGGLDIVVNNAGITR 101 (306)
T ss_pred HHHhCCCCEEEECCCCCC
Confidence 4799999999643
No 165
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.83 E-value=3e-08 Score=96.89 Aligned_cols=81 Identities=12% Similarity=0.118 Sum_probs=63.0
Q ss_pred CCeEEEEcCCc--hHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 10 LFDVIILGASG--FTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 10 ~~~ilV~GATG--~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
...++|+||++ .||+++++.|+++| ++|++.+|+ +++++..+++.. ....+..+.+|++|+++++++++
T Consensus 6 ~k~~lITGas~~~GIG~aia~~la~~G-------~~vil~~r~-~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~ 76 (262)
T PRK07984 6 GKRILVTGVASKLSIAYGIAQAMHREG-------AELAFTYQN-DKLKGRVEEFAA-QLGSDIVLPCDVAEDASIDAMFA 76 (262)
T ss_pred CCEEEEeCCCCCccHHHHHHHHHHHCC-------CEEEEEecc-hhHHHHHHHHHh-ccCCceEeecCCCCHHHHHHHHH
Confidence 35799999985 89999999999998 799999998 344444444421 12345678899999999998875
Q ss_pred -------CccEEeecCCCC
Q 012947 88 -------QTKLLLNCVGPY 99 (452)
Q Consensus 88 -------~~dvVIn~aGp~ 99 (452)
+.|+||||||..
T Consensus 77 ~~~~~~g~iD~linnAg~~ 95 (262)
T PRK07984 77 ELGKVWPKFDGFVHSIGFA 95 (262)
T ss_pred HHHhhcCCCCEEEECCccC
Confidence 469999999954
No 166
>PRK06196 oxidoreductase; Provisional
Probab=98.83 E-value=2.1e-08 Score=100.45 Aligned_cols=78 Identities=18% Similarity=0.228 Sum_probs=68.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||||++|++++++|+++| ++|++++|+.++++++.+++. ++.++.+|++|.++++++++
T Consensus 26 ~k~vlITGasggIG~~~a~~L~~~G-------~~Vv~~~R~~~~~~~~~~~l~-----~v~~~~~Dl~d~~~v~~~~~~~ 93 (315)
T PRK06196 26 GKTAIVTGGYSGLGLETTRALAQAG-------AHVIVPARRPDVAREALAGID-----GVEVVMLDLADLESVRAFAERF 93 (315)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhh-----hCeEEEccCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 799999999999888777652 47889999999999988775
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
++|+||||||..
T Consensus 94 ~~~~~~iD~li~nAg~~ 110 (315)
T PRK06196 94 LDSGRRIDILINNAGVM 110 (315)
T ss_pred HhcCCCCCEEEECCCCC
Confidence 579999999964
No 167
>PRK06841 short chain dehydrogenase; Provisional
Probab=98.83 E-value=1.5e-08 Score=97.78 Aligned_cols=80 Identities=15% Similarity=0.088 Sum_probs=64.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|++|+.++++|+++| ++|++++|+.+.. +...++. ...+..+.+|++|++++.++++
T Consensus 15 ~k~vlItGas~~IG~~la~~l~~~G-------~~Vi~~~r~~~~~-~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~ 83 (255)
T PRK06841 15 GKVAVVTGGASGIGHAIAELFAAKG-------ARVALLDRSEDVA-EVAAQLL---GGNAKGLVCDVSDSQSVEAAVAAV 83 (255)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHH-HHHHHhh---CCceEEEEecCCCHHHHHHHHHHH
Confidence 4579999999999999999999998 7999999988753 3334332 2356688999999999988776
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
+.|+||||+|...
T Consensus 84 ~~~~~~~d~vi~~ag~~~ 101 (255)
T PRK06841 84 ISAFGRIDILVNSAGVAL 101 (255)
T ss_pred HHHhCCCCEEEECCCCCC
Confidence 4699999999643
No 168
>PRK06484 short chain dehydrogenase; Validated
Probab=98.82 E-value=1.7e-08 Score=107.93 Aligned_cols=79 Identities=19% Similarity=0.126 Sum_probs=69.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|+||+.+++.|+++| ++|++.+|+.++++++.++++ .++..+.+|++|+++++++++
T Consensus 269 ~k~~lItGas~gIG~~~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~ 337 (520)
T PRK06484 269 PRVVAITGGARGIGRAVADRFAAAG-------DRLLIIDRDAEGAKKLAEALG----DEHLSVQADITDEAAVESAFAQI 337 (520)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhC----CceeEEEccCCCHHHHHHHHHHH
Confidence 4679999999999999999999998 799999999999988887663 356678999999999988776
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
..|+||||||..
T Consensus 338 ~~~~g~id~li~nAg~~ 354 (520)
T PRK06484 338 QARWGRLDVLVNNAGIA 354 (520)
T ss_pred HHHcCCCCEEEECCCCc
Confidence 379999999964
No 169
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=98.82 E-value=1.4e-08 Score=98.08 Aligned_cols=82 Identities=18% Similarity=0.091 Sum_probs=68.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|++|+.+++.|+++| .++++++|+.++++++.+++.. ...++.++.+|++|.+++.++++
T Consensus 11 ~k~vlVtG~s~gIG~~la~~l~~~G-------~~vv~~~r~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~i~~~~~~~ 82 (255)
T PRK06113 11 GKCAIITGAGAGIGKEIAITFATAG-------ASVVVSDINADAANHVVDEIQQ-LGGQAFACRCDITSEQELSALADFA 82 (255)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CeEEEEeCCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHH
Confidence 4689999999999999999999998 7899999999888777666531 12356788999999999988765
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
+.|+||||+|..
T Consensus 83 ~~~~~~~d~li~~ag~~ 99 (255)
T PRK06113 83 LSKLGKVDILVNNAGGG 99 (255)
T ss_pred HHHcCCCCEEEECCCCC
Confidence 469999999864
No 170
>PRK07806 short chain dehydrogenase; Provisional
Probab=98.82 E-value=3.3e-08 Score=94.86 Aligned_cols=82 Identities=15% Similarity=0.034 Sum_probs=65.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh-HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~-kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
..+++|+||+|++|+.++++|+++| ++|++.+|+.+ +++.+.+++.. ...++.++.+|++|++++.++++
T Consensus 6 ~k~vlItGasggiG~~l~~~l~~~G-------~~V~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~ 77 (248)
T PRK07806 6 GKTALVTGSSRGIGADTAKILAGAG-------AHVVVNYRQKAPRANKVVAEIEA-AGGRASAVGADLTDEESVAALMDT 77 (248)
T ss_pred CcEEEEECCCCcHHHHHHHHHHHCC-------CEEEEEeCCchHhHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHH
Confidence 3579999999999999999999998 78999999753 45555554431 12356788999999999988776
Q ss_pred ------CccEEeecCCCC
Q 012947 88 ------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (452)
++|+|||++|..
T Consensus 78 ~~~~~~~~d~vi~~ag~~ 95 (248)
T PRK07806 78 AREEFGGLDALVLNASGG 95 (248)
T ss_pred HHHhCCCCcEEEECCCCC
Confidence 579999999854
No 171
>PRK12937 short chain dehydrogenase; Provisional
Probab=98.82 E-value=2.6e-08 Score=95.20 Aligned_cols=82 Identities=18% Similarity=0.130 Sum_probs=64.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++|+||+|++|+.++++|+++| +++++..|+ ....+++.+++.. ...++.++.+|++|++++.++++
T Consensus 5 ~~~vlItG~~~~iG~~la~~l~~~g-------~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~ 76 (245)
T PRK12937 5 NKVAIVTGASRGIGAAIARRLAADG-------FAVAVNYAGSAAAADELVAEIEA-AGGRAIAVQADVADAAAVTRLFDA 76 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CEEEEecCCCHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHH
Confidence 3579999999999999999999998 688777765 3445555554421 13467889999999999988877
Q ss_pred ------CccEEeecCCCC
Q 012947 88 ------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (452)
++|+|||++|..
T Consensus 77 ~~~~~~~id~vi~~ag~~ 94 (245)
T PRK12937 77 AETAFGRIDVLVNNAGVM 94 (245)
T ss_pred HHHHcCCCCEEEECCCCC
Confidence 579999999864
No 172
>PRK06398 aldose dehydrogenase; Validated
Probab=98.82 E-value=8.8e-09 Score=100.08 Aligned_cols=71 Identities=15% Similarity=0.079 Sum_probs=60.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|++|+.++++|+++| ++|++.+|+.++. .++.++.+|++|+++++++++
T Consensus 6 gk~vlItGas~gIG~~ia~~l~~~G-------~~Vi~~~r~~~~~------------~~~~~~~~D~~~~~~i~~~~~~~ 66 (258)
T PRK06398 6 DKVAIVTGGSQGIGKAVVNRLKEEG-------SNVINFDIKEPSY------------NDVDYFKVDVSNKEQVIKGIDYV 66 (258)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CeEEEEeCCcccc------------CceEEEEccCCCHHHHHHHHHHH
Confidence 3589999999999999999999998 7999999986432 246789999999999988776
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
+.|+||||+|..
T Consensus 67 ~~~~~~id~li~~Ag~~ 83 (258)
T PRK06398 67 ISKYGRIDILVNNAGIE 83 (258)
T ss_pred HHHcCCCCEEEECCCCC
Confidence 579999999853
No 173
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.82 E-value=1.7e-08 Score=96.70 Aligned_cols=82 Identities=18% Similarity=0.144 Sum_probs=67.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..+++|+||+|++|+.+++.|+++| .+|++.+|+.+++++..+++.. ...++..+.+|++|+++++++++
T Consensus 5 ~~~~lItG~~g~iG~~~a~~l~~~G-------~~vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 76 (253)
T PRK08217 5 DKVIVITGGAQGLGRAMAEYLAQKG-------AKLALIDLNQEKLEEAVAECGA-LGTEVRGYAANVTDEEDVEATFAQI 76 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHH
Confidence 4579999999999999999999998 7899999999888877766532 13456788999999988877665
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
..|+|||++|..
T Consensus 77 ~~~~~~id~vi~~ag~~ 93 (253)
T PRK08217 77 AEDFGQLNGLINNAGIL 93 (253)
T ss_pred HHHcCCCCEEEECCCcc
Confidence 369999999853
No 174
>PLN02583 cinnamoyl-CoA reductase
Probab=98.81 E-value=6e-08 Score=96.42 Aligned_cols=82 Identities=18% Similarity=0.236 Sum_probs=65.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh--HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT--RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~--kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
...|+|+|||||+|++++++|+++| ++|+++.|+.+ +..+....+.. ...++.++.+|++|.+++.+++.
T Consensus 6 ~k~vlVTGatG~IG~~lv~~Ll~~G-------~~V~~~~R~~~~~~~~~~~~~l~~-~~~~~~~~~~Dl~d~~~~~~~l~ 77 (297)
T PLN02583 6 SKSVCVMDASGYVGFWLVKRLLSRG-------YTVHAAVQKNGETEIEKEIRGLSC-EEERLKVFDVDPLDYHSILDALK 77 (297)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCC-------CEEEEEEcCchhhhHHHHHHhccc-CCCceEEEEecCCCHHHHHHHHc
Confidence 3579999999999999999999998 89999999643 33333343321 12357889999999999999999
Q ss_pred CccEEeecCCCC
Q 012947 88 QTKLLLNCVGPY 99 (452)
Q Consensus 88 ~~dvVIn~aGp~ 99 (452)
++|.|+|++++.
T Consensus 78 ~~d~v~~~~~~~ 89 (297)
T PLN02583 78 GCSGLFCCFDPP 89 (297)
T ss_pred CCCEEEEeCccC
Confidence 999999988754
No 175
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=98.81 E-value=2.4e-08 Score=93.43 Aligned_cols=140 Identities=16% Similarity=0.169 Sum_probs=100.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~-~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++++|+.|+||+.+++.|+..+ .++.++.-+.|+.+..+ +|.+ .....+.++.+|+++.+++++.++
T Consensus 5 GKna~vtggagGIGl~~sk~Ll~kg-------ik~~~i~~~~En~~a~a-kL~ai~p~~~v~F~~~DVt~~~~~~~~f~k 76 (261)
T KOG4169|consen 5 GKNALVTGGAGGIGLATSKALLEKG-------IKVLVIDDSEENPEAIA-KLQAINPSVSVIFIKCDVTNRGDLEAAFDK 76 (261)
T ss_pred CceEEEecCCchhhHHHHHHHHHcC-------chheeehhhhhCHHHHH-HHhccCCCceEEEEEeccccHHHHHHHHHH
Confidence 3579999999999999999999998 67777777777765443 3332 234678899999999999988776
Q ss_pred ------CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEE---cCCCCCcchhhH
Q 012947 88 ------QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLV---SACGFDSIPAEL 158 (452)
Q Consensus 88 ------~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv---~~~G~~s~P~dl 158 (452)
..|++||.||..... -++. +.-+|++|-..-+...++.++.+--..|-+|| |..|+++.|- .
T Consensus 77 i~~~fg~iDIlINgAGi~~dk---d~e~-----Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~-~ 147 (261)
T KOG4169|consen 77 ILATFGTIDILINGAGILDDK---DWER-----TINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPV-F 147 (261)
T ss_pred HHHHhCceEEEEcccccccch---hHHH-----hhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCcccc-c
Confidence 479999999987633 2332 44678888877777765655544333444444 5569988884 4
Q ss_pred HHHHHhhh
Q 012947 159 GVMFNSRQ 166 (452)
Q Consensus 159 ~~~~~~~~ 166 (452)
.+|.++|+
T Consensus 148 pVY~AsKa 155 (261)
T KOG4169|consen 148 PVYAASKA 155 (261)
T ss_pred hhhhhccc
Confidence 56655543
No 176
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=98.81 E-value=1.3e-08 Score=97.71 Aligned_cols=80 Identities=16% Similarity=0.149 Sum_probs=66.3
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc----
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~---- 87 (452)
+++|+||+|++|+.++++|+++| ++|++++|+.++.+++.+++.. ...++.++.+|+.|++++.++++
T Consensus 3 ~vlItGa~g~lG~~l~~~l~~~g-------~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~ 74 (255)
T TIGR01963 3 TALVTGAASGIGLAIALALAAAG-------ANVVVNDLGEAGAEAAAKVATD-AGGSVIYLVADVTKEDEIADMIAAAAA 74 (255)
T ss_pred EEEEcCCcchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh-cCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 69999999999999999999998 7999999999888777665531 12467889999999997766554
Q ss_pred ---CccEEeecCCCC
Q 012947 88 ---QTKLLLNCVGPY 99 (452)
Q Consensus 88 ---~~dvVIn~aGp~ 99 (452)
+.|+|||++|..
T Consensus 75 ~~~~~d~vi~~a~~~ 89 (255)
T TIGR01963 75 EFGGLDILVNNAGIQ 89 (255)
T ss_pred hcCCCCEEEECCCCC
Confidence 579999999864
No 177
>PRK08309 short chain dehydrogenase; Provisional
Probab=98.81 E-value=6.2e-08 Score=89.30 Aligned_cols=103 Identities=14% Similarity=0.197 Sum_probs=82.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
++++|+||||++|. +++.|+++| ++|.+.+|+.++++.+...+. ...++.++.+|+.|++++.++++
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~G-------~~V~v~~R~~~~~~~l~~~l~--~~~~i~~~~~Dv~d~~sv~~~i~~~l 70 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEKG-------FHVSVIARREVKLENVKREST--TPESITPLPLDYHDDDALKLAIKSTI 70 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHCc-------CEEEEEECCHHHHHHHHHHhh--cCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 46999999988765 999999998 899999999988877766553 13467788899999999988876
Q ss_pred ----CccEEeecCCCCCCCCHHHHHHHHHhCCc-----EEEecCcHH
Q 012947 88 ----QTKLLLNCVGPYRLHGDPVAAACVHSGCD-----YLDISGEPE 125 (452)
Q Consensus 88 ----~~dvVIn~aGp~~~~~~~vv~ac~~~g~~-----yvDlsge~~ 125 (452)
..|++|+.+-.. ....+.++|.+.|++ ++++.|...
T Consensus 71 ~~~g~id~lv~~vh~~--~~~~~~~~~~~~gv~~~~~~~~h~~gs~~ 115 (177)
T PRK08309 71 EKNGPFDLAVAWIHSS--AKDALSVVCRELDGSSETYRLFHVLGSAA 115 (177)
T ss_pred HHcCCCeEEEEecccc--chhhHHHHHHHHccCCCCceEEEEeCCcC
Confidence 357888887432 337899999999988 888887655
No 178
>PLN02686 cinnamoyl-CoA reductase
Probab=98.81 E-value=4e-08 Score=100.80 Aligned_cols=83 Identities=19% Similarity=0.110 Sum_probs=66.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC---C--CCCCccEEEEeCCCHHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP---S--HSLSIPILTADTTDPPSLH 83 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~---~--~~~~v~~v~~Dl~d~~sl~ 83 (452)
...+|+|+||+||+|++++++|+++| ++|++..|+.++++.+. ++.. . ...++.++.+|++|.+++.
T Consensus 52 ~~k~VLVTGatGfIG~~lv~~L~~~G-------~~V~~~~r~~~~~~~l~-~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~ 123 (367)
T PLN02686 52 EARLVCVTGGVSFLGLAIVDRLLRHG-------YSVRIAVDTQEDKEKLR-EMEMFGEMGRSNDGIWTVMANLTEPESLH 123 (367)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHH-HHhhhccccccCCceEEEEcCCCCHHHHH
Confidence 35689999999999999999999998 89998899887765542 2210 0 0124678899999999999
Q ss_pred HHHcCccEEeecCCCC
Q 012947 84 RLCSQTKLLLNCVGPY 99 (452)
Q Consensus 84 ~~~~~~dvVIn~aGp~ 99 (452)
++++++|.|||+++..
T Consensus 124 ~~i~~~d~V~hlA~~~ 139 (367)
T PLN02686 124 EAFDGCAGVFHTSAFV 139 (367)
T ss_pred HHHHhccEEEecCeee
Confidence 9999999999999864
No 179
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.80 E-value=3.9e-08 Score=95.59 Aligned_cols=86 Identities=17% Similarity=0.098 Sum_probs=65.3
Q ss_pred CCCCCCCCCCCeEEEEcCC--chHHHHHHHHHHHcCCCCCCCceEEEEEecChhH---HHHHHHHhCCCCCCCccEEEEe
Q 012947 1 MQAQSQIPELFDVIILGAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR---VKQALQWASPSHSLSIPILTAD 75 (452)
Q Consensus 1 ~~~~~~~~~~~~ilV~GAT--G~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~k---l~~l~~~l~~~~~~~v~~v~~D 75 (452)
||-.... +...++|+||+ +.||+.++++|+++| ++|++.+|+.+. ++++.+++ ..+.++.+|
T Consensus 2 ~~~~~~~-~~k~~lItGas~g~GIG~a~a~~la~~G-------~~v~l~~r~~~~~~~~~~~~~~~-----~~~~~~~~D 68 (258)
T PRK07533 2 MQPLLPL-AGKRGLVVGIANEQSIAWGCARAFRALG-------AELAVTYLNDKARPYVEPLAEEL-----DAPIFLPLD 68 (258)
T ss_pred CCccccc-CCCEEEEECCCCCCcHHHHHHHHHHHcC-------CEEEEEeCChhhHHHHHHHHHhh-----ccceEEecC
Confidence 4433333 34579999998 499999999999998 799999998643 44444443 234578899
Q ss_pred CCCHHHHHHHHc-------CccEEeecCCCC
Q 012947 76 TTDPPSLHRLCS-------QTKLLLNCVGPY 99 (452)
Q Consensus 76 l~d~~sl~~~~~-------~~dvVIn~aGp~ 99 (452)
++|+++++++++ +.|++|||||..
T Consensus 69 ~~~~~~v~~~~~~~~~~~g~ld~lv~nAg~~ 99 (258)
T PRK07533 69 VREPGQLEAVFARIAEEWGRLDFLLHSIAFA 99 (258)
T ss_pred cCCHHHHHHHHHHHHHHcCCCCEEEEcCccC
Confidence 999999988765 469999999864
No 180
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=98.80 E-value=3.4e-08 Score=95.58 Aligned_cols=80 Identities=21% Similarity=0.124 Sum_probs=63.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|++|++++++|+++| ++|++.+|+.. .+++.+++.. ...++.++.+|++|.+++.++++
T Consensus 8 ~k~vlVtGas~gIG~~la~~l~~~G-------~~v~~~~r~~~-~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 78 (260)
T PRK12823 8 GKVVVVTGAAQGIGRGVALRAAAEG-------ARVVLVDRSEL-VHEVAAELRA-AGGEALALTADLETYAGAQAAMAAA 78 (260)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCchH-HHHHHHHHHh-cCCeEEEEEEeCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 79999999853 3444444421 12356788999999998887776
Q ss_pred -----CccEEeecCCC
Q 012947 88 -----QTKLLLNCVGP 98 (452)
Q Consensus 88 -----~~dvVIn~aGp 98 (452)
+.|+||||||.
T Consensus 79 ~~~~~~id~lv~nAg~ 94 (260)
T PRK12823 79 VEAFGRIDVLINNVGG 94 (260)
T ss_pred HHHcCCCeEEEECCcc
Confidence 57999999984
No 181
>PRK06523 short chain dehydrogenase; Provisional
Probab=98.79 E-value=9.6e-09 Score=99.44 Aligned_cols=73 Identities=14% Similarity=0.142 Sum_probs=61.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|++|+.++++|+++| ++|++++|+.++. . ..++.++.+|+.|+++++++++
T Consensus 9 ~k~vlItGas~gIG~~ia~~l~~~G-------~~v~~~~r~~~~~------~----~~~~~~~~~D~~~~~~~~~~~~~~ 71 (260)
T PRK06523 9 GKRALVTGGTKGIGAATVARLLEAG-------ARVVTTARSRPDD------L----PEGVEFVAADLTTAEGCAAVARAV 71 (260)
T ss_pred CCEEEEECCCCchhHHHHHHHHHCC-------CEEEEEeCChhhh------c----CCceeEEecCCCCHHHHHHHHHHH
Confidence 4679999999999999999999998 7999999987542 1 2357789999999998887654
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
+.|+||||+|..
T Consensus 72 ~~~~~~id~vi~~ag~~ 88 (260)
T PRK06523 72 LERLGGVDILVHVLGGS 88 (260)
T ss_pred HHHcCCCCEEEECCccc
Confidence 579999999953
No 182
>PRK06924 short chain dehydrogenase; Provisional
Probab=98.79 E-value=2.2e-08 Score=96.32 Aligned_cols=77 Identities=18% Similarity=0.157 Sum_probs=62.3
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh-hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc-
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT- 89 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~-~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~- 89 (452)
.++|+||+|++|+.++++|++++ ++|++.+|+. +.++++.+.. ..++.++.+|++|+++++++++++
T Consensus 3 ~vlItGasggiG~~ia~~l~~~g-------~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 71 (251)
T PRK06924 3 YVIITGTSQGLGEAIANQLLEKG-------THVISISRTENKELTKLAEQY----NSNLTFHSLDLQDVHELETNFNEIL 71 (251)
T ss_pred EEEEecCCchHHHHHHHHHHhcC-------CEEEEEeCCchHHHHHHHhcc----CCceEEEEecCCCHHHHHHHHHHHH
Confidence 69999999999999999999998 7999999987 5555544432 246778999999999998887643
Q ss_pred ----------cEEeecCCCC
Q 012947 90 ----------KLLLNCVGPY 99 (452)
Q Consensus 90 ----------dvVIn~aGp~ 99 (452)
.++||++|..
T Consensus 72 ~~~~~~~~~~~~~v~~ag~~ 91 (251)
T PRK06924 72 SSIQEDNVSSIHLINNAGMV 91 (251)
T ss_pred HhcCcccCCceEEEEcceec
Confidence 1789999853
No 183
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=98.79 E-value=3.1e-08 Score=94.96 Aligned_cols=82 Identities=17% Similarity=0.098 Sum_probs=62.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEE-ecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~ia-gR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..++|+||||++|+.+++.|+++| +++++. +|+..+.++..+++.. ...++..+.+|++|.+++.++++
T Consensus 4 k~~lVtG~s~giG~~~a~~l~~~G-------~~vv~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~ 75 (246)
T PRK12938 4 RIAYVTGGMGGIGTSICQRLHKDG-------FKVVAGCGPNSPRRVKWLEDQKA-LGFDFIASEGNVGDWDSTKAAFDKV 75 (246)
T ss_pred CEEEEECCCChHHHHHHHHHHHcC-------CEEEEEcCCChHHHHHHHHHHHh-cCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 479999999999999999999998 677664 5555555555555421 12356677899999999888765
Q ss_pred -----CccEEeecCCCCC
Q 012947 88 -----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -----~~dvVIn~aGp~~ 100 (452)
++|+||||+|...
T Consensus 76 ~~~~~~id~li~~ag~~~ 93 (246)
T PRK12938 76 KAEVGEIDVLVNNAGITR 93 (246)
T ss_pred HHHhCCCCEEEECCCCCC
Confidence 5799999999643
No 184
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=98.79 E-value=2.1e-08 Score=96.24 Aligned_cols=83 Identities=14% Similarity=0.139 Sum_probs=66.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEE-ecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~ia-gR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
...++|+||+|++|+.++++|++++ +++++. .|+.++++++.+++.. ...++.++.+|++|++++.+++++
T Consensus 6 ~~~~lItG~s~~iG~~la~~l~~~g-------~~v~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~~~~ 77 (247)
T PRK12935 6 GKVAIVTGGAKGIGKAITVALAQEG-------AKVVINYNSSKEAAENLVNELGK-EGHDVYAVQADVSKVEDANRLVEE 77 (247)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcC-------CEEEEEcCCcHHHHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHH
Confidence 4589999999999999999999998 677665 4566777666665532 124578899999999999988875
Q ss_pred -------ccEEeecCCCCC
Q 012947 89 -------TKLLLNCVGPYR 100 (452)
Q Consensus 89 -------~dvVIn~aGp~~ 100 (452)
+|+||||+|...
T Consensus 78 ~~~~~~~id~vi~~ag~~~ 96 (247)
T PRK12935 78 AVNHFGKVDILVNNAGITR 96 (247)
T ss_pred HHHHcCCCCEEEECCCCCC
Confidence 699999999754
No 185
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=98.79 E-value=2.9e-08 Score=94.60 Aligned_cols=83 Identities=14% Similarity=0.108 Sum_probs=65.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh-HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~-kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
..+++|+||||++|+.++++|+++| ++|++..|+.. +.+...+++.. ...++.++.+|++|++++.++++
T Consensus 5 ~~~vlItG~sg~iG~~l~~~l~~~G-------~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~ 76 (248)
T PRK05557 5 GKVALVTGASRGIGRAIAERLAAQG-------ANVVINYASSEAGAEALVAEIGA-LGGKALAVQGDVSDAESVERAVDE 76 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCCchhHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHH
Confidence 3589999999999999999999998 78888888655 34455444421 13467788899999999888766
Q ss_pred ------CccEEeecCCCCC
Q 012947 88 ------QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (452)
++|+|||++|...
T Consensus 77 ~~~~~~~id~vi~~ag~~~ 95 (248)
T PRK05557 77 AKAEFGGVDILVNNAGITR 95 (248)
T ss_pred HHHHcCCCCEEEECCCcCC
Confidence 5799999998643
No 186
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=98.79 E-value=4.6e-08 Score=99.32 Aligned_cols=79 Identities=15% Similarity=0.229 Sum_probs=64.1
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~-- 88 (452)
++|+|+|||||+|+++++.|++.| ++|++.+|+..........+. ...++.++.+|++|.+++.++++.
T Consensus 5 k~ilItGatG~IG~~l~~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~ 75 (349)
T TIGR02622 5 KKVLVTGHTGFKGSWLSLWLLELG-------AEVYGYSLDPPTSPNLFELLN--LAKKIEDHFGDIRDAAKLRKAIAEFK 75 (349)
T ss_pred CEEEEECCCChhHHHHHHHHHHCC-------CEEEEEeCCCccchhHHHHHh--hcCCceEEEccCCCHHHHHHHHhhcC
Confidence 579999999999999999999998 789999998765444333332 123567889999999999999985
Q ss_pred ccEEeecCCC
Q 012947 89 TKLLLNCVGP 98 (452)
Q Consensus 89 ~dvVIn~aGp 98 (452)
+|+|||+||.
T Consensus 76 ~d~vih~A~~ 85 (349)
T TIGR02622 76 PEIVFHLAAQ 85 (349)
T ss_pred CCEEEECCcc
Confidence 5999999984
No 187
>PRK08264 short chain dehydrogenase; Validated
Probab=98.79 E-value=2e-08 Score=95.82 Aligned_cols=74 Identities=26% Similarity=0.288 Sum_probs=64.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCce-EEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIK-SLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~-~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++|+||||++|+.++++|+++| . +|++.+|+.+++++ . ..++.++.+|+.|++++.++++
T Consensus 6 ~~~vlItGgsg~iG~~la~~l~~~G-------~~~V~~~~r~~~~~~~----~----~~~~~~~~~D~~~~~~~~~~~~~ 70 (238)
T PRK08264 6 GKVVLVTGANRGIGRAFVEQLLARG-------AAKVYAAARDPESVTD----L----GPRVVPLQLDVTDPASVAAAAEA 70 (238)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------cccEEEEecChhhhhh----c----CCceEEEEecCCCHHHHHHHHHh
Confidence 4679999999999999999999998 6 89999999887654 2 2467889999999999998887
Q ss_pred --CccEEeecCCC
Q 012947 88 --QTKLLLNCVGP 98 (452)
Q Consensus 88 --~~dvVIn~aGp 98 (452)
..|+|||++|.
T Consensus 71 ~~~id~vi~~ag~ 83 (238)
T PRK08264 71 ASDVTILVNNAGI 83 (238)
T ss_pred cCCCCEEEECCCc
Confidence 47999999997
No 188
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.79 E-value=6.9e-08 Score=94.82 Aligned_cols=78 Identities=15% Similarity=0.112 Sum_probs=62.4
Q ss_pred CCeEEEEcCC--chHHHHHHHHHHHcCCCCCCCceEEEEEecCh---hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 012947 10 LFDVIILGAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRNP---TRVKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (452)
Q Consensus 10 ~~~ilV~GAT--G~iG~~va~~L~~~g~~~~~~~~~v~iagR~~---~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~ 84 (452)
...++|+||+ +.||+.+++.|+++| ++|++.+|+. ++++++.++++ ....+.+|++|++++++
T Consensus 10 ~k~~lItGas~~~GIG~aia~~la~~G-------~~V~l~~r~~~~~~~~~~l~~~~~-----~~~~~~~Dl~~~~~v~~ 77 (272)
T PRK08159 10 GKRGLILGVANNRSIAWGIAKACRAAG-------AELAFTYQGDALKKRVEPLAAELG-----AFVAGHCDVTDEASIDA 77 (272)
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCC-------CEEEEEcCchHHHHHHHHHHHhcC-----CceEEecCCCCHHHHHH
Confidence 4579999997 899999999999998 7999988873 44445544432 34578999999999988
Q ss_pred HHc-------CccEEeecCCCC
Q 012947 85 LCS-------QTKLLLNCVGPY 99 (452)
Q Consensus 85 ~~~-------~~dvVIn~aGp~ 99 (452)
+++ +.|++|||||..
T Consensus 78 ~~~~~~~~~g~iD~lv~nAG~~ 99 (272)
T PRK08159 78 VFETLEKKWGKLDFVVHAIGFS 99 (272)
T ss_pred HHHHHHHhcCCCcEEEECCccc
Confidence 765 479999999964
No 189
>PRK07831 short chain dehydrogenase; Provisional
Probab=98.78 E-value=2.1e-08 Score=97.29 Aligned_cols=83 Identities=17% Similarity=0.154 Sum_probs=67.8
Q ss_pred CCeEEEEcCCc-hHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHc
Q 012947 10 LFDVIILGASG-FTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 10 ~~~ilV~GATG-~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~-~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
...++|+||+| .+|+.+++.|+++| ++|++.+|+.+++++..+++... ...++.++.+|++|+++++++++
T Consensus 17 ~k~vlItG~sg~gIG~~ia~~l~~~G-------~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 89 (262)
T PRK07831 17 GKVVLVTAAAGTGIGSATARRALEEG-------ARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALID 89 (262)
T ss_pred CCEEEEECCCcccHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHH
Confidence 46799999997 79999999999998 78999999998887776655310 11357788999999999988775
Q ss_pred -------CccEEeecCCCC
Q 012947 88 -------QTKLLLNCVGPY 99 (452)
Q Consensus 88 -------~~dvVIn~aGp~ 99 (452)
++|+||||+|..
T Consensus 90 ~~~~~~g~id~li~~ag~~ 108 (262)
T PRK07831 90 AAVERLGRLDVLVNNAGLG 108 (262)
T ss_pred HHHHHcCCCCEEEECCCCC
Confidence 469999999953
No 190
>PRK07041 short chain dehydrogenase; Provisional
Probab=98.78 E-value=2e-08 Score=95.29 Aligned_cols=77 Identities=14% Similarity=0.154 Sum_probs=66.3
Q ss_pred EEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC---cc
Q 012947 14 IILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ---TK 90 (452)
Q Consensus 14 lV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~---~d 90 (452)
+|+||+|++|+.++++|+++| ++|++.+|+.++++.+.+++.. ..++.++.+|++|++++.++++. +|
T Consensus 1 lItGas~~iG~~~a~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~id 71 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEG-------ARVTIASRSRDRLAAAARALGG--GAPVRTAALDITDEAAVDAFFAEAGPFD 71 (230)
T ss_pred CeecCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHhcCCCC
Confidence 589999999999999999998 7999999999888877766531 24677899999999999998874 69
Q ss_pred EEeecCCCC
Q 012947 91 LLLNCVGPY 99 (452)
Q Consensus 91 vVIn~aGp~ 99 (452)
+|||++|..
T Consensus 72 ~li~~ag~~ 80 (230)
T PRK07041 72 HVVITAADT 80 (230)
T ss_pred EEEECCCCC
Confidence 999999854
No 191
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=98.78 E-value=3e-08 Score=99.45 Aligned_cols=118 Identities=18% Similarity=0.067 Sum_probs=82.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++|+|||++||+.+++.|+++|. ++|++++|+.++++++.+++.. ....+.++.+|++|.++++++++
T Consensus 4 k~vlITGas~GIG~aia~~L~~~G~------~~V~l~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~ 76 (314)
T TIGR01289 4 PTVIITGASSGLGLYAAKALAATGE------WHVIMACRDFLKAEQAAKSLGM-PKDSYTIMHLDLGSLDSVRQFVQQFR 76 (314)
T ss_pred CEEEEECCCChHHHHHHHHHHHcCC------CEEEEEeCCHHHHHHHHHHhcC-CCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 4799999999999999999999873 6899999999998888777642 12356788899999999887764
Q ss_pred ----CccEEeecCCCCCCCC-HHHHHHHHHhCCcEEEecCcHHHHHHHHHHHH
Q 012947 88 ----QTKLLLNCVGPYRLHG-DPVAAACVHSGCDYLDISGEPEFMERMEARYH 135 (452)
Q Consensus 88 ----~~dvVIn~aGp~~~~~-~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~ 135 (452)
+.|++|||||.+.... ........-..+.-+++.+....++.+.+.+.
T Consensus 77 ~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~ 129 (314)
T TIGR01289 77 ESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLK 129 (314)
T ss_pred HhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHH
Confidence 4799999999643211 00001111111223556666666666655443
No 192
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=98.78 E-value=2.7e-08 Score=96.17 Aligned_cols=80 Identities=13% Similarity=0.037 Sum_probs=61.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|+||+.++++|+++| ++|++.+|+.. ++..+++.. ...++..+.+|++|.++++++++
T Consensus 10 ~k~~lItG~~~gIG~a~a~~l~~~G-------~~vv~~~~~~~--~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~ 79 (253)
T PRK08993 10 GKVAVVTGCDTGLGQGMALGLAEAG-------CDIVGINIVEP--TETIEQVTA-LGRRFLSLTADLRKIDGIPALLERA 79 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCC-------CEEEEecCcch--HHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHHH
Confidence 4579999999999999999999998 78888777542 122222211 12356788999999999988876
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
+.|+||||||..
T Consensus 80 ~~~~~~~D~li~~Ag~~ 96 (253)
T PRK08993 80 VAEFGHIDILVNNAGLI 96 (253)
T ss_pred HHHhCCCCEEEECCCCC
Confidence 479999999964
No 193
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=98.77 E-value=3.9e-08 Score=99.35 Aligned_cols=82 Identities=16% Similarity=0.133 Sum_probs=63.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhH-----HHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR-----VKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~k-----l~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~ 84 (452)
..+|+|+|||||+|+++++.|+++| ++|.+++|+.+. ++.+.+... ....++.++.+|+.|.+++.+
T Consensus 6 ~~~vlVTGatGfiG~~l~~~L~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~ 77 (340)
T PLN02653 6 RKVALITGITGQDGSYLTEFLLSKG-------YEVHGIIRRSSNFNTQRLDHIYIDPH-PNKARMKLHYGDLSDASSLRR 77 (340)
T ss_pred CCEEEEECCCCccHHHHHHHHHHCC-------CEEEEEecccccccccchhhhccccc-cccCceEEEEecCCCHHHHHH
Confidence 4679999999999999999999998 799999886542 322221110 012357899999999999999
Q ss_pred HHcC--ccEEeecCCCC
Q 012947 85 LCSQ--TKLLLNCVGPY 99 (452)
Q Consensus 85 ~~~~--~dvVIn~aGp~ 99 (452)
++++ +|+|||||+..
T Consensus 78 ~~~~~~~d~Vih~A~~~ 94 (340)
T PLN02653 78 WLDDIKPDEVYNLAAQS 94 (340)
T ss_pred HHHHcCCCEEEECCccc
Confidence 9985 69999999864
No 194
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.77 E-value=9.8e-08 Score=91.69 Aligned_cols=78 Identities=14% Similarity=0.067 Sum_probs=64.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR-~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
..+++|+||+|++|+.+++.|+++| ++|++..| +.++++.+..++. .++.++.+|++|++++.+++++
T Consensus 5 ~k~ilItGas~gIG~~la~~l~~~G-------~~vv~~~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~ 73 (253)
T PRK08642 5 EQTVLVTGGSRGLGAAIARAFAREG-------ARVVVNYHQSEDAAEALADELG----DRAIALQADVTDREQVQAMFAT 73 (253)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHCC-------CeEEEEcCCCHHHHHHHHHHhC----CceEEEEcCCCCHHHHHHHHHH
Confidence 3579999999999999999999998 78877654 6667766666542 4677889999999999888763
Q ss_pred --------ccEEeecCCC
Q 012947 89 --------TKLLLNCVGP 98 (452)
Q Consensus 89 --------~dvVIn~aGp 98 (452)
+|+|||++|.
T Consensus 74 ~~~~~g~~id~li~~ag~ 91 (253)
T PRK08642 74 ATEHFGKPITTVVNNALA 91 (253)
T ss_pred HHHHhCCCCeEEEECCCc
Confidence 8999999985
No 195
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=98.77 E-value=3.3e-08 Score=93.70 Aligned_cols=74 Identities=23% Similarity=0.362 Sum_probs=61.3
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc--c
Q 012947 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT--K 90 (452)
Q Consensus 13 ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~--d 90 (452)
|+|+|||||+|++++++|++++ ..|+...|+.......... .++.++.+|+.|.+.++++++.. |
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g-------~~v~~~~~~~~~~~~~~~~------~~~~~~~~dl~~~~~~~~~~~~~~~d 67 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKG-------HEVIVLSRSSNSESFEEKK------LNVEFVIGDLTDKEQLEKLLEKANID 67 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTT-------TEEEEEESCSTGGHHHHHH------TTEEEEESETTSHHHHHHHHHHHTES
T ss_pred EEEEccCCHHHHHHHHHHHHcC-------Ccccccccccccccccccc------ceEEEEEeeccccccccccccccCce
Confidence 7999999999999999999998 6777777766554332222 26789999999999999999976 9
Q ss_pred EEeecCCCC
Q 012947 91 LLLNCVGPY 99 (452)
Q Consensus 91 vVIn~aGp~ 99 (452)
+|||+++..
T Consensus 68 ~vi~~a~~~ 76 (236)
T PF01370_consen 68 VVIHLAAFS 76 (236)
T ss_dssp EEEEEBSSS
T ss_pred EEEEeeccc
Confidence 999999864
No 196
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=98.77 E-value=6.1e-08 Score=97.60 Aligned_cols=79 Identities=11% Similarity=0.196 Sum_probs=60.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHH---HHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQA---LQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l---~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
++|+|+|||||+|++++++|++++ ++|++.+|........ ..++. ..++.++.+|++|++++.++++
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g-------~~V~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~ 70 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNG-------HDVVILDNLCNSKRSVLPVIERLG---GKHPTFVEGDIRNEALLTEILH 70 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCC-------CeEEEEecCCCchHhHHHHHHHhc---CCCceEEEccCCCHHHHHHHHh
Confidence 479999999999999999999988 7888887643222211 12221 2356788999999999999887
Q ss_pred --CccEEeecCCCC
Q 012947 88 --QTKLLLNCVGPY 99 (452)
Q Consensus 88 --~~dvVIn~aGp~ 99 (452)
++|+|||+||..
T Consensus 71 ~~~~d~vvh~a~~~ 84 (338)
T PRK10675 71 DHAIDTVIHFAGLK 84 (338)
T ss_pred cCCCCEEEECCccc
Confidence 589999999853
No 197
>PRK12742 oxidoreductase; Provisional
Probab=98.76 E-value=4.3e-08 Score=93.33 Aligned_cols=77 Identities=16% Similarity=0.148 Sum_probs=62.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR-~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
...++|+||+|+||+.++++|+++| +++++..| +.++++++.+++ .+.++.+|++|.+++.+.++.
T Consensus 6 ~k~vlItGasggIG~~~a~~l~~~G-------~~v~~~~~~~~~~~~~l~~~~------~~~~~~~D~~~~~~~~~~~~~ 72 (237)
T PRK12742 6 GKKVLVLGGSRGIGAAIVRRFVTDG-------ANVRFTYAGSKDAAERLAQET------GATAVQTDSADRDAVIDVVRK 72 (237)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-------CEEEEecCCCHHHHHHHHHHh------CCeEEecCCCCHHHHHHHHHH
Confidence 3579999999999999999999998 78887765 566776665544 346788999999988887763
Q ss_pred ---ccEEeecCCCC
Q 012947 89 ---TKLLLNCVGPY 99 (452)
Q Consensus 89 ---~dvVIn~aGp~ 99 (452)
.|+||||+|..
T Consensus 73 ~~~id~li~~ag~~ 86 (237)
T PRK12742 73 SGALDILVVNAGIA 86 (237)
T ss_pred hCCCcEEEECCCCC
Confidence 79999999864
No 198
>PRK07201 short chain dehydrogenase; Provisional
Probab=98.76 E-value=2.3e-08 Score=109.88 Aligned_cols=82 Identities=20% Similarity=0.166 Sum_probs=70.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||||++|+.+++.|+++| ++|++++|+.++++++.+++.. ...++.++.+|++|+++++++++
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~~~~~~~~~ 442 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEAG-------ATVFLVARNGEALDELVAEIRA-KGGTAHAYTCDLTDSAAVDHTVKDI 442 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHH
Confidence 4579999999999999999999998 7999999999998888776632 13467888999999999998877
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
++|+||||||..
T Consensus 443 ~~~~g~id~li~~Ag~~ 459 (657)
T PRK07201 443 LAEHGHVDYLVNNAGRS 459 (657)
T ss_pred HHhcCCCCEEEECCCCC
Confidence 579999999954
No 199
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=98.76 E-value=2.5e-08 Score=110.05 Aligned_cols=84 Identities=15% Similarity=0.094 Sum_probs=69.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~-~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++|+||+|+||+.++++|+++| ++|++++|+.++++.+.+++... ....+..+.+|++|++++.++++
T Consensus 414 gkvvLVTGasggIG~aiA~~La~~G-------a~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~ 486 (676)
T TIGR02632 414 RRVAFVTGGAGGIGRETARRLAAEG-------AHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFAD 486 (676)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHhCC-------CEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHH
Confidence 3579999999999999999999998 89999999998887776665310 11346688999999999988877
Q ss_pred ------CccEEeecCCCCC
Q 012947 88 ------QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ------~~dvVIn~aGp~~ 100 (452)
++|+||||||...
T Consensus 487 i~~~~g~iDilV~nAG~~~ 505 (676)
T TIGR02632 487 VALAYGGVDIVVNNAGIAT 505 (676)
T ss_pred HHHhcCCCcEEEECCCCCC
Confidence 5799999999643
No 200
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=98.76 E-value=7.2e-08 Score=93.75 Aligned_cols=116 Identities=8% Similarity=0.033 Sum_probs=75.0
Q ss_pred CeEEEEcCC--chHHHHHHHHHHHcCCCCCCCceEEEEEecChh--HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 11 FDVIILGAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRNPT--RVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 11 ~~ilV~GAT--G~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~--kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
..++|+||+ +.||+.++++|+++| ++|++..|+.+ +.++..+++.. ....+.++.+|++|++++++++
T Consensus 7 k~~lItGas~~~GIG~aia~~la~~G-------~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~ 78 (258)
T PRK07370 7 KKALVTGIANNRSIAWGIAQQLHAAG-------AELGITYLPDEKGRFEKKVRELTE-PLNPSLFLPCDVQDDAQIEETF 78 (258)
T ss_pred cEEEEeCCCCCCchHHHHHHHHHHCC-------CEEEEEecCcccchHHHHHHHHHh-ccCcceEeecCcCCHHHHHHHH
Confidence 579999986 799999999999998 78888865432 23333333321 1124567889999999998877
Q ss_pred c-------CccEEeecCCCCCCC--CHHHHHHHHHh--CCcEEEecCcHHHHHHHHHHH
Q 012947 87 S-------QTKLLLNCVGPYRLH--GDPVAAACVHS--GCDYLDISGEPEFMERMEARY 134 (452)
Q Consensus 87 ~-------~~dvVIn~aGp~~~~--~~~vv~ac~~~--g~~yvDlsge~~~~~~~~~~~ 134 (452)
+ +.|++|||+|..... ..++.+.-.+. ..--+++.+...+++.+.+.+
T Consensus 79 ~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m 137 (258)
T PRK07370 79 ETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLM 137 (258)
T ss_pred HHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHH
Confidence 5 479999999964310 11222222222 223456666666666665544
No 201
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.76 E-value=5.3e-08 Score=95.54 Aligned_cols=77 Identities=14% Similarity=0.087 Sum_probs=60.7
Q ss_pred CeEEEEcCCc--hHHHHHHHHHHHcCCCCCCCceEEEEEecChhHH---HHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 012947 11 FDVIILGASG--FTGKYVVREALKLFNFPSSPIKSLALAGRNPTRV---KQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 11 ~~ilV~GATG--~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl---~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
..++|+||++ +||+.+++.|+++| ++|++.+|+.+.. +++.+++ .....+.+|++|+++++++
T Consensus 8 k~~lVTGas~~~GIG~aiA~~la~~G-------a~V~~~~r~~~~~~~~~~~~~~~-----g~~~~~~~Dv~d~~~v~~~ 75 (271)
T PRK06505 8 KRGLIMGVANDHSIAWGIAKQLAAQG-------AELAFTYQGEALGKRVKPLAESL-----GSDFVLPCDVEDIASVDAV 75 (271)
T ss_pred CEEEEeCCCCCCcHHHHHHHHHHhCC-------CEEEEecCchHHHHHHHHHHHhc-----CCceEEeCCCCCHHHHHHH
Confidence 5799999997 99999999999998 8999999986433 2332322 1234678999999999887
Q ss_pred Hc-------CccEEeecCCCC
Q 012947 86 CS-------QTKLLLNCVGPY 99 (452)
Q Consensus 86 ~~-------~~dvVIn~aGp~ 99 (452)
++ +.|+||||||..
T Consensus 76 ~~~~~~~~g~iD~lVnnAG~~ 96 (271)
T PRK06505 76 FEALEKKWGKLDFVVHAIGFS 96 (271)
T ss_pred HHHHHHHhCCCCEEEECCccC
Confidence 75 479999999964
No 202
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=98.76 E-value=5.2e-08 Score=89.11 Aligned_cols=127 Identities=11% Similarity=0.047 Sum_probs=92.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
....+|+||+.+||++|++.|++.| +++++++++.+..++....+.. ..+...+.||++++.+++.+++
T Consensus 14 sk~~~vtGg~sGIGrAia~~la~~G-------arv~v~dl~~~~A~ata~~L~g--~~~h~aF~~DVS~a~~v~~~l~e~ 84 (256)
T KOG1200|consen 14 SKVAAVTGGSSGIGRAIAQLLAKKG-------ARVAVADLDSAAAEATAGDLGG--YGDHSAFSCDVSKAHDVQNTLEEM 84 (256)
T ss_pred cceeEEecCCchHHHHHHHHHHhcC-------cEEEEeecchhhHHHHHhhcCC--CCccceeeeccCcHHHHHHHHHHH
Confidence 4568999999999999999999999 8999999999998888888852 3466789999999988887665
Q ss_pred -----CccEEeecCCCCCCCCHHHHHHHHHhCC--cEEEecCcHHHHHHHHHHHHHHHHhCccEEEcC
Q 012947 88 -----QTKLLLNCVGPYRLHGDPVAAACVHSGC--DYLDISGEPEFMERMEARYHEKAVETGSLLVSA 148 (452)
Q Consensus 88 -----~~dvVIn~aGp~~~~~~~vv~ac~~~g~--~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~ 148 (452)
..++||||||.... ..+++.--+++. ..++++|.....+.....+- ..+..+..||+-
T Consensus 85 ~k~~g~psvlVncAGItrD--~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~-~~~~~~~sIiNv 149 (256)
T KOG1200|consen 85 EKSLGTPSVLVNCAGITRD--GLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMV-MNQQQGLSIINV 149 (256)
T ss_pred HHhcCCCcEEEEcCccccc--cceeeccHHHHHHHHHhhchhhHHHHHHHHHHHH-HhcCCCceEEee
Confidence 47999999997653 233333333333 35677777666665543332 234445455543
No 203
>PRK12744 short chain dehydrogenase; Provisional
Probab=98.76 E-value=3.5e-08 Score=95.48 Aligned_cols=82 Identities=15% Similarity=0.154 Sum_probs=62.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec----ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR----NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR----~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
..+++|+||+|++|+.++++|+++| +++++..+ +.++++++.+++.. ...++.++.+|++|+++++++
T Consensus 8 ~k~vlItGa~~gIG~~~a~~l~~~G-------~~vv~i~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~D~~~~~~~~~~ 79 (257)
T PRK12744 8 GKVVLIAGGAKNLGGLIARDLAAQG-------AKAVAIHYNSAASKADAEETVAAVKA-AGAKAVAFQADLTTAAAVEKL 79 (257)
T ss_pred CcEEEEECCCchHHHHHHHHHHHCC-------CcEEEEecCCccchHHHHHHHHHHHH-hCCcEEEEecCcCCHHHHHHH
Confidence 3589999999999999999999988 67666654 33445555554421 123677889999999999887
Q ss_pred Hc-------CccEEeecCCCC
Q 012947 86 CS-------QTKLLLNCVGPY 99 (452)
Q Consensus 86 ~~-------~~dvVIn~aGp~ 99 (452)
++ +.|+|||++|..
T Consensus 80 ~~~~~~~~~~id~li~~ag~~ 100 (257)
T PRK12744 80 FDDAKAAFGRPDIAINTVGKV 100 (257)
T ss_pred HHHHHHhhCCCCEEEECCccc
Confidence 76 579999999963
No 204
>PRK06940 short chain dehydrogenase; Provisional
Probab=98.76 E-value=8.4e-08 Score=94.24 Aligned_cols=106 Identities=19% Similarity=0.234 Sum_probs=75.7
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc----
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~---- 87 (452)
.++|+|| |+||+++++.|+ +| .+|++++|+.++++++.+++.. ...++.++.+|++|++++.++++
T Consensus 4 ~~lItGa-~gIG~~la~~l~-~G-------~~Vv~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dv~d~~~i~~~~~~~~~ 73 (275)
T PRK06940 4 VVVVIGA-GGIGQAIARRVG-AG-------KKVLLADYNEENLEAAAKTLRE-AGFDVSTQEVDVSSRESVKALAATAQT 73 (275)
T ss_pred EEEEECC-ChHHHHHHHHHh-CC-------CEEEEEeCCHHHHHHHHHHHHh-cCCeEEEEEeecCCHHHHHHHHHHHHh
Confidence 6899998 699999999996 67 7999999999888877776632 12357788999999999988875
Q ss_pred --CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHH
Q 012947 88 --QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARY 134 (452)
Q Consensus 88 --~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~ 134 (452)
..|+||||||..... .. .+... -+++.+....++.+.+.+
T Consensus 74 ~g~id~li~nAG~~~~~-~~-~~~~~-----~vN~~g~~~l~~~~~~~m 115 (275)
T PRK06940 74 LGPVTGLVHTAGVSPSQ-AS-PEAIL-----KVDLYGTALVLEEFGKVI 115 (275)
T ss_pred cCCCCEEEECCCcCCch-hh-HHHHH-----HHhhHHHHHHHHHHHHHH
Confidence 479999999964321 11 22222 244555555555554433
No 205
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.75 E-value=5.5e-08 Score=94.75 Aligned_cols=82 Identities=10% Similarity=0.068 Sum_probs=61.4
Q ss_pred CCeEEEEcC--CchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 10 LFDVIILGA--SGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 10 ~~~ilV~GA--TG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
...++|+|| +++||+.+++.|+++| ++|++.+|+. +.++..+++.. .......+.+|++|+++++++++
T Consensus 6 ~k~~lITGa~~~~GIG~a~a~~l~~~G-------~~v~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~ 76 (261)
T PRK08690 6 GKKILITGMISERSIAYGIAKACREQG-------AELAFTYVVD-KLEERVRKMAA-ELDSELVFRCDVASDDEINQVFA 76 (261)
T ss_pred CcEEEEECCCCCCcHHHHHHHHHHHCC-------CEEEEEcCcH-HHHHHHHHHHh-ccCCceEEECCCCCHHHHHHHHH
Confidence 357999997 6799999999999998 7999888763 33333333321 11234578999999999988875
Q ss_pred -------CccEEeecCCCCC
Q 012947 88 -------QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -------~~dvVIn~aGp~~ 100 (452)
+.|++|||||...
T Consensus 77 ~~~~~~g~iD~lVnnAG~~~ 96 (261)
T PRK08690 77 DLGKHWDGLDGLVHSIGFAP 96 (261)
T ss_pred HHHHHhCCCcEEEECCccCC
Confidence 5799999999753
No 206
>PRK07023 short chain dehydrogenase; Provisional
Probab=98.75 E-value=3.5e-08 Score=94.56 Aligned_cols=77 Identities=17% Similarity=0.126 Sum_probs=61.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
++++|+||||++|+.++++|+++| ++|++++|+.++. +.+.. ..++.++.+|++|.++++++++
T Consensus 2 ~~vlItGasggiG~~ia~~l~~~G-------~~v~~~~r~~~~~--~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 68 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQPG-------IAVLGVARSRHPS--LAAAA----GERLAEVELDLSDAAAAAAWLAGDL 68 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHhCC-------CEEEEEecCcchh--hhhcc----CCeEEEEEeccCCHHHHHHHHHHHH
Confidence 479999999999999999999998 7999999987642 22211 2467889999999999988543
Q ss_pred --------CccEEeecCCCCC
Q 012947 88 --------QTKLLLNCVGPYR 100 (452)
Q Consensus 88 --------~~dvVIn~aGp~~ 100 (452)
..|++|||+|...
T Consensus 69 ~~~~~~~~~~~~~v~~ag~~~ 89 (243)
T PRK07023 69 LAAFVDGASRVLLINNAGTVE 89 (243)
T ss_pred HHHhccCCCceEEEEcCcccC
Confidence 3689999998643
No 207
>PRK06720 hypothetical protein; Provisional
Probab=98.75 E-value=8.5e-08 Score=87.71 Aligned_cols=112 Identities=11% Similarity=0.057 Sum_probs=79.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||++++|+.+++.|++.| .+|++.+|+.+.+++..+++.. ...+..++.+|++|.+++.++++
T Consensus 16 gk~~lVTGa~~GIG~aia~~l~~~G-------~~V~l~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~v~~~v~~~ 87 (169)
T PRK06720 16 GKVAIVTGGGIGIGRNTALLLAKQG-------AKVIVTDIDQESGQATVEEITN-LGGEALFVSYDMEKQGDWQRVISIT 87 (169)
T ss_pred CCEEEEecCCChHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHH
Confidence 4679999999999999999999988 7999999998887776666531 12356678999999999887664
Q ss_pred -----CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHH
Q 012947 88 -----QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERME 131 (452)
Q Consensus 88 -----~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~ 131 (452)
+.|++|||||.+... .+..+...+. -+.+|+.+.....+...
T Consensus 88 ~~~~G~iDilVnnAG~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 134 (169)
T PRK06720 88 LNAFSRIDMLFQNAGLYKID-SIFSRQQEND-SNVLCINDVWIEIKQLT 134 (169)
T ss_pred HHHcCCCCEEEECCCcCCCC-CcccccchhH-hhceeccHHHHHHHHHH
Confidence 589999999965432 1222211111 23667776644444443
No 208
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.75 E-value=3.7e-08 Score=93.80 Aligned_cols=81 Identities=15% Similarity=0.188 Sum_probs=62.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh-hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~-~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
.+++|+||||++|+.++++|+++| +++++..|+. +..+.+.+.+.. ...++.++.+|++|++++.++++
T Consensus 7 ~~vlItGasg~iG~~l~~~l~~~g-------~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~ 78 (249)
T PRK12825 7 RVALVTGAARGLGRAIALRLARAG-------ADVVVHYRSDEEAAEELVEAVEA-LGRRAQAVQADVTDKAALEAAVAAA 78 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCC-------CeEEEEeCCCHHHHHHHHHHHHh-cCCceEEEECCcCCHHHHHHHHHHH
Confidence 589999999999999999999998 6777766654 344444443321 13467889999999999988775
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
++|+|||++|..
T Consensus 79 ~~~~~~id~vi~~ag~~ 95 (249)
T PRK12825 79 VERFGRIDILVNNAGIF 95 (249)
T ss_pred HHHcCCCCEEEECCccC
Confidence 469999999943
No 209
>PLN02572 UDP-sulfoquinovose synthase
Probab=98.74 E-value=1.1e-07 Score=100.09 Aligned_cols=79 Identities=15% Similarity=0.153 Sum_probs=60.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh--------------------HHHHHHHHhCCCCCCC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT--------------------RVKQALQWASPSHSLS 68 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~--------------------kl~~l~~~l~~~~~~~ 68 (452)
+.++|+|||||||||++++++|+++| ++|++++|... +++.+.+ . ...+
T Consensus 46 ~~k~VLVTGatGfIGs~Lv~~L~~~G-------~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~---~~~~ 114 (442)
T PLN02572 46 KKKKVMVIGGDGYCGWATALHLSKRG-------YEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKE-V---SGKE 114 (442)
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCC-------CeEEEEeccccccccccccccccccccchHHHHHHHHH-h---hCCc
Confidence 35689999999999999999999998 78988764211 1111111 1 1235
Q ss_pred ccEEEEeCCCHHHHHHHHc--CccEEeecCCC
Q 012947 69 IPILTADTTDPPSLHRLCS--QTKLLLNCVGP 98 (452)
Q Consensus 69 v~~v~~Dl~d~~sl~~~~~--~~dvVIn~aGp 98 (452)
+.++.+|+.|.+.+.++++ ++|+|||+|+.
T Consensus 115 v~~v~~Dl~d~~~v~~~l~~~~~D~ViHlAa~ 146 (442)
T PLN02572 115 IELYVGDICDFEFLSEAFKSFEPDAVVHFGEQ 146 (442)
T ss_pred ceEEECCCCCHHHHHHHHHhCCCCEEEECCCc
Confidence 7899999999999999998 48999999964
No 210
>KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism]
Probab=98.74 E-value=5.1e-08 Score=97.46 Aligned_cols=154 Identities=19% Similarity=0.276 Sum_probs=124.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHH-HHHHHHcCc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPP-SLHRLCSQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~-sl~~~~~~~ 89 (452)
..|+++|+ ||+.+-++++|.++.+ .+|+++.|...+.+++.+. .+++.+..|+.|++ .|++.+++.
T Consensus 3 ~~vlllgs-g~v~~p~~d~ls~~~d------v~vtva~~~~~~~~~~~~~------~~~~av~ldv~~~~~~L~~~v~~~ 69 (445)
T KOG0172|consen 3 KGVLLLGS-GFVSRPVADFLSRKKD------VNVTVASRTLKDAEALVKG------INIKAVSLDVADEELALRKEVKPL 69 (445)
T ss_pred cceEEecC-ccccchHHHHHhhcCC------ceEEEehhhHHHHHHHhcC------CCccceEEEccchHHHHHhhhccc
Confidence 46899986 9999999999999874 8999999999999888763 35899999999998 999999999
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhcCC
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIP 169 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~~~ 169 (452)
|+|+... ||..+ ..+++.|+.+..|.+.-+...+-+ .++++.++..|+++.+-.|+|..-..|.+.-......+
T Consensus 70 D~viSLl-P~t~h-~lVaK~~i~~~~~~vtsSyv~pe~----~~L~~~~v~AG~ti~~e~gldpGidhm~a~~ti~~vh~ 143 (445)
T KOG0172|consen 70 DLVISLL-PYTFH-PLVAKGCIITKEDSVTSSYVDPEL----EELEKAAVPAGSTIMNEIGLDPGIDHMPAMKTIDLVHE 143 (445)
T ss_pred ceeeeec-cchhh-HHHHHHHHHhhcccccccccCHHH----HhhhhhccCCCceEecccccCcchhhhhhhccchHHHh
Confidence 9999987 66655 578999999999988776555544 44588899999999999999988888777755555543
Q ss_pred CCCcceEEEEEEeccC
Q 012947 170 PAVPNQIEAYVSLESD 185 (452)
Q Consensus 170 ~~~~~~~~~~~~~~~~ 185 (452)
....+++|.+.-|+
T Consensus 144 --hgg~i~sf~sycGg 157 (445)
T KOG0172|consen 144 --HGGKIKSFKSYCGG 157 (445)
T ss_pred --hcceeeehhhhcCC
Confidence 34567888764333
No 211
>PRK08303 short chain dehydrogenase; Provisional
Probab=98.74 E-value=4.4e-08 Score=97.97 Aligned_cols=81 Identities=15% Similarity=0.169 Sum_probs=64.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh----------hHHHHHHHHhCCCCCCCccEEEEeCCCH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP----------TRVKQALQWASPSHSLSIPILTADTTDP 79 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~----------~kl~~l~~~l~~~~~~~v~~v~~Dl~d~ 79 (452)
...++|+||+++||+.+++.|++.| ++|++++|+. ++++++.+++.. ...++.++.+|++|+
T Consensus 8 ~k~~lITGgs~GIG~aia~~la~~G-------~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~Dv~~~ 79 (305)
T PRK08303 8 GKVALVAGATRGAGRGIAVELGAAG-------ATVYVTGRSTRARRSEYDRPETIEETAELVTA-AGGRGIAVQVDHLVP 79 (305)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEecccccccccccccchHHHHHHHHHh-cCCceEEEEcCCCCH
Confidence 4689999999999999999999998 8999999983 455555555431 123567889999999
Q ss_pred HHHHHHHc-------CccEEeecC-CC
Q 012947 80 PSLHRLCS-------QTKLLLNCV-GP 98 (452)
Q Consensus 80 ~sl~~~~~-------~~dvVIn~a-Gp 98 (452)
++++++++ +.|++|||+ |.
T Consensus 80 ~~v~~~~~~~~~~~g~iDilVnnA~g~ 106 (305)
T PRK08303 80 EQVRALVERIDREQGRLDILVNDIWGG 106 (305)
T ss_pred HHHHHHHHHHHHHcCCccEEEECCccc
Confidence 99988775 479999999 73
No 212
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=98.74 E-value=2.6e-08 Score=95.06 Aligned_cols=80 Identities=14% Similarity=0.078 Sum_probs=63.7
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc----
Q 012947 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (452)
Q Consensus 13 ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~---- 87 (452)
++|+||+|++|+.++++|+++| +++++++|+ .++++++.+++.. ...++.++.+|++|++++.++++
T Consensus 1 vlItGas~giG~~~a~~l~~~G-------~~v~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 72 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADG-------FEICVHYHSGRSDAESVVSAIQA-QGGNARLLQFDVADRVACRTLLEADIA 72 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCCCHHHHHHHHHHHHH-cCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 5899999999999999999998 788888764 5566666655531 13467889999999999988776
Q ss_pred ---CccEEeecCCCCC
Q 012947 88 ---QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ---~~dvVIn~aGp~~ 100 (452)
..|++||++|...
T Consensus 73 ~~~~i~~li~~ag~~~ 88 (239)
T TIGR01831 73 EHGAYYGVVLNAGITR 88 (239)
T ss_pred HcCCCCEEEECCCCCC
Confidence 3699999998643
No 213
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=98.74 E-value=3.1e-08 Score=94.74 Aligned_cols=80 Identities=15% Similarity=0.117 Sum_probs=64.7
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEE-EecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC--
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLAL-AGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~i-agR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~-- 88 (452)
.++|+||+|++|+.+++.|+++| ++|++ ..|+.++.++...++.. ...++.++.+|++|++++++++++
T Consensus 3 ~~lItGa~g~iG~~l~~~l~~~g-------~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~i~~~~~~~~ 74 (247)
T PRK09730 3 IALVTGGSRGIGRATALLLAQEG-------YTVAVNYQQNLHAAQEVVNLITQ-AGGKAFVLQADISDENQVVAMFTAID 74 (247)
T ss_pred EEEEeCCCchHHHHHHHHHHHCC-------CEEEEEeCCChHHHHHHHHHHHh-CCCeEEEEEccCCCHHHHHHHHHHHH
Confidence 69999999999999999999988 78776 46888877766655531 123577899999999999888774
Q ss_pred -----ccEEeecCCCC
Q 012947 89 -----TKLLLNCVGPY 99 (452)
Q Consensus 89 -----~dvVIn~aGp~ 99 (452)
.|+|||++|..
T Consensus 75 ~~~~~id~vi~~ag~~ 90 (247)
T PRK09730 75 QHDEPLAALVNNAGIL 90 (247)
T ss_pred HhCCCCCEEEECCCCC
Confidence 58999999964
No 214
>PRK08324 short chain dehydrogenase; Validated
Probab=98.74 E-value=6e-08 Score=107.33 Aligned_cols=81 Identities=15% Similarity=0.089 Sum_probs=69.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++|+||+|+||+.+++.|+++| .+|++++|+.++++.+.+++.. ..++.++.+|++|++++.++++
T Consensus 423 k~vLVTGasggIG~~la~~L~~~G-------a~Vvl~~r~~~~~~~~~~~l~~--~~~v~~v~~Dvtd~~~v~~~~~~~~ 493 (681)
T PRK08324 423 KVALVTGAAGGIGKATAKRLAAEG-------ACVVLADLDEEAAEAAAAELGG--PDRALGVACDVTDEAAVQAAFEEAA 493 (681)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCc-------CEEEEEeCCHHHHHHHHHHHhc--cCcEEEEEecCCCHHHHHHHHHHHH
Confidence 579999999999999999999998 7999999999998888777642 1467889999999999988776
Q ss_pred ----CccEEeecCCCCC
Q 012947 88 ----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (452)
++|+||||+|...
T Consensus 494 ~~~g~iDvvI~~AG~~~ 510 (681)
T PRK08324 494 LAFGGVDIVVSNAGIAI 510 (681)
T ss_pred HHcCCCCEEEECCCCCC
Confidence 5799999999643
No 215
>PRK06123 short chain dehydrogenase; Provisional
Probab=98.73 E-value=4e-08 Score=94.21 Aligned_cols=81 Identities=23% Similarity=0.169 Sum_probs=64.0
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEe-cChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAG-RNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iag-R~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
.++|+||+|++|+.++++|+++| +++++.. |++++++++.+++.. ...++.++.+|++|.+++.++++
T Consensus 4 ~~lVtG~~~~iG~~~a~~l~~~G-------~~vv~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~ 75 (248)
T PRK06123 4 VMIITGASRGIGAATALLAAERG-------YAVCLNYLRNRDAAEAVVQAIRR-QGGEALAVAADVADEADVLRLFEAVD 75 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCC-------CeEEEecCCCHHHHHHHHHHHHh-CCCcEEEEEeccCCHHHHHHHHHHHH
Confidence 69999999999999999999998 6777776 556666666555521 12356788999999999988876
Q ss_pred ----CccEEeecCCCCC
Q 012947 88 ----QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ----~~dvVIn~aGp~~ 100 (452)
+.|+||||+|...
T Consensus 76 ~~~~~id~li~~ag~~~ 92 (248)
T PRK06123 76 RELGRLDALVNNAGILE 92 (248)
T ss_pred HHhCCCCEEEECCCCCC
Confidence 5799999999653
No 216
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=98.73 E-value=5e-08 Score=102.35 Aligned_cols=76 Identities=14% Similarity=0.253 Sum_probs=54.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
++++|+|||||||||++++++|+++| ++|++.+|...........+. ...+++++..|+.+. .+.+
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~G-------~~V~~ldr~~~~~~~~~~~~~--~~~~~~~~~~Di~~~-----~~~~ 184 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGRG-------DEVIVIDNFFTGRKENLVHLF--GNPRFELIRHDVVEP-----ILLE 184 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCC-------CEEEEEeCCCCccHhHhhhhc--cCCceEEEECccccc-----cccC
Confidence 45899999999999999999999998 799998885322111111111 123567788888654 3568
Q ss_pred ccEEeecCCC
Q 012947 89 TKLLLNCVGP 98 (452)
Q Consensus 89 ~dvVIn~aGp 98 (452)
+|+|||+|+.
T Consensus 185 ~D~ViHlAa~ 194 (436)
T PLN02166 185 VDQIYHLACP 194 (436)
T ss_pred CCEEEECcee
Confidence 9999999985
No 217
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=98.73 E-value=3.9e-08 Score=93.75 Aligned_cols=80 Identities=18% Similarity=0.148 Sum_probs=64.4
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR-~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
.++|+||+|++|+.++++|+++| +++++..| +.++++++.+++.. ...++.++.+|++|++++.++++
T Consensus 2 ~~lItG~sg~iG~~la~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~ 73 (242)
T TIGR01829 2 IALVTGGMGGIGTAICQRLAKDG-------YRVAANCGPNEERAEAWLQEQGA-LGFDFRVVEGDVSSFESCKAAVAKVE 73 (242)
T ss_pred EEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCCHHHHHHHHHHHHh-hCCceEEEEecCCCHHHHHHHHHHHH
Confidence 58999999999999999999998 78888888 66666665554421 12467899999999999887765
Q ss_pred ----CccEEeecCCCC
Q 012947 88 ----QTKLLLNCVGPY 99 (452)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (452)
.+|+||||+|..
T Consensus 74 ~~~~~id~vi~~ag~~ 89 (242)
T TIGR01829 74 AELGPIDVLVNNAGIT 89 (242)
T ss_pred HHcCCCcEEEECCCCC
Confidence 479999999854
No 218
>PLN02240 UDP-glucose 4-epimerase
Probab=98.73 E-value=1e-07 Score=96.53 Aligned_cols=82 Identities=12% Similarity=0.189 Sum_probs=62.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhH----HHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR----VKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~k----l~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
..+|+|+|||||+|++++++|++++ ++|++.+|.... .+.+.+... ....++.++.+|++|++++.++
T Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g-------~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~l~~~ 76 (352)
T PLN02240 5 GRTILVTGGAGYIGSHTVLQLLLAG-------YKVVVIDNLDNSSEEALRRVKELAG-DLGDNLVFHKVDLRDKEALEKV 76 (352)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCCcchHHHHHHHHHhhc-ccCccceEEecCcCCHHHHHHH
Confidence 3579999999999999999999988 789888875322 222222111 0123578899999999999998
Q ss_pred Hc--CccEEeecCCCC
Q 012947 86 CS--QTKLLLNCVGPY 99 (452)
Q Consensus 86 ~~--~~dvVIn~aGp~ 99 (452)
++ ++|+|||||+..
T Consensus 77 ~~~~~~d~vih~a~~~ 92 (352)
T PLN02240 77 FASTRFDAVIHFAGLK 92 (352)
T ss_pred HHhCCCCEEEEccccC
Confidence 87 689999999853
No 219
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=98.73 E-value=8.5e-08 Score=93.46 Aligned_cols=75 Identities=20% Similarity=0.286 Sum_probs=61.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--C
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--Q 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--~ 88 (452)
++|+|+||.||||++++.+|++.| ++|++.+.-...-.+.+.. ..++++++|+.|.+.|+++++ +
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G-------~~vvV~DNL~~g~~~~v~~------~~~~f~~gDi~D~~~L~~vf~~~~ 67 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTG-------HEVVVLDNLSNGHKIALLK------LQFKFYEGDLLDRALLTAVFEENK 67 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCC-------CeEEEEecCCCCCHHHhhh------ccCceEEeccccHHHHHHHHHhcC
Confidence 479999999999999999999998 8999999744333333322 126899999999999999998 6
Q ss_pred ccEEeecCCC
Q 012947 89 TKLLLNCVGP 98 (452)
Q Consensus 89 ~dvVIn~aGp 98 (452)
+|.|||+||-
T Consensus 68 idaViHFAa~ 77 (329)
T COG1087 68 IDAVVHFAAS 77 (329)
T ss_pred CCEEEECccc
Confidence 8999999984
No 220
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.72 E-value=6.7e-08 Score=94.01 Aligned_cols=80 Identities=10% Similarity=0.060 Sum_probs=65.1
Q ss_pred CCeEEEEcCC--chHHHHHHHHHHHcCCCCCCCceEEEEEecC---hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 012947 10 LFDVIILGAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRN---PTRVKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (452)
Q Consensus 10 ~~~ilV~GAT--G~iG~~va~~L~~~g~~~~~~~~~v~iagR~---~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~ 84 (452)
...++|+||+ +.||+.+++.|+++| ++|++++|+ .++++++.+++. ..++.++.+|++|++++++
T Consensus 7 ~k~~lItGa~~s~GIG~aia~~la~~G-------~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~ 76 (257)
T PRK08594 7 GKTYVVMGVANKRSIAWGIARSLHNAG-------AKLVFTYAGERLEKEVRELADTLE---GQESLLLPCDVTSDEEITA 76 (257)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHCC-------CEEEEecCcccchHHHHHHHHHcC---CCceEEEecCCCCHHHHHH
Confidence 3579999997 899999999999998 799998775 456666666652 2457788999999999988
Q ss_pred HHc-------CccEEeecCCCC
Q 012947 85 LCS-------QTKLLLNCVGPY 99 (452)
Q Consensus 85 ~~~-------~~dvVIn~aGp~ 99 (452)
+++ +.|++|||+|..
T Consensus 77 ~~~~~~~~~g~ld~lv~nag~~ 98 (257)
T PRK08594 77 CFETIKEEVGVIHGVAHCIAFA 98 (257)
T ss_pred HHHHHHHhCCCccEEEECcccC
Confidence 775 479999999854
No 221
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=98.72 E-value=4.7e-08 Score=97.33 Aligned_cols=63 Identities=16% Similarity=0.274 Sum_probs=51.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--C
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--Q 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--~ 88 (452)
++|+||||+||+|++++++|++.+ +|.+.+|... .+.+|+.|.+.+.++++ +
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g--------~V~~~~~~~~------------------~~~~Dl~d~~~~~~~~~~~~ 54 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG--------NLIALDVHST------------------DYCGDFSNPEGVAETVRKIR 54 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC--------CEEEeccccc------------------cccCCCCCHHHHHHHHHhcC
Confidence 479999999999999999999876 3666676421 23479999999999988 5
Q ss_pred ccEEeecCCCC
Q 012947 89 TKLLLNCVGPY 99 (452)
Q Consensus 89 ~dvVIn~aGp~ 99 (452)
+|+|||||+..
T Consensus 55 ~D~Vih~Aa~~ 65 (299)
T PRK09987 55 PDVIVNAAAHT 65 (299)
T ss_pred CCEEEECCccC
Confidence 89999999864
No 222
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=98.71 E-value=7.5e-08 Score=95.33 Aligned_cols=81 Identities=15% Similarity=0.238 Sum_probs=60.6
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC-
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~--~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~- 88 (452)
+|+|+||||++|++++++|+++++ ..+|++.+|.. .+.+. .+.+. ...++.++.+|++|++++.+++++
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~-----~~~v~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~ 72 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHP-----DAEVIVLDKLTYAGNLEN-LADLE--DNPRYRFVKGDIGDRELVSRLFTEH 72 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCC-----CCEEEEecCCCcchhhhh-hhhhc--cCCCcEEEEcCCcCHHHHHHHHhhc
Confidence 489999999999999999998862 15787777632 12111 12221 123678899999999999999987
Q ss_pred -ccEEeecCCCCC
Q 012947 89 -TKLLLNCVGPYR 100 (452)
Q Consensus 89 -~dvVIn~aGp~~ 100 (452)
+|+|||+++...
T Consensus 73 ~~d~vi~~a~~~~ 85 (317)
T TIGR01181 73 QPDAVVHFAAESH 85 (317)
T ss_pred CCCEEEEcccccC
Confidence 899999998653
No 223
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.71 E-value=6.2e-08 Score=94.10 Aligned_cols=79 Identities=16% Similarity=0.153 Sum_probs=65.0
Q ss_pred CCeEEEEcC--CchHHHHHHHHHHHcCCCCCCCceEEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 012947 10 LFDVIILGA--SGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 10 ~~~ilV~GA--TG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~--~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
...++|+|| ++.||+.+++.|+++| ++|++.+|+. +.++++.+++. .++.++.+|++|+++++++
T Consensus 7 ~k~~lItGa~~s~GIG~a~a~~la~~G-------~~v~l~~r~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~i~~~ 75 (256)
T PRK07889 7 GKRILVTGVITDSSIAFHVARVAQEQG-------AEVVLTGFGRALRLTERIAKRLP----EPAPVLELDVTNEEHLASL 75 (256)
T ss_pred CCEEEEeCCCCcchHHHHHHHHHHHCC-------CEEEEecCccchhHHHHHHHhcC----CCCcEEeCCCCCHHHHHHH
Confidence 357999999 8999999999999998 7999999864 44566666553 3567899999999999887
Q ss_pred Hc-------CccEEeecCCCC
Q 012947 86 CS-------QTKLLLNCVGPY 99 (452)
Q Consensus 86 ~~-------~~dvVIn~aGp~ 99 (452)
++ +.|++|||||..
T Consensus 76 ~~~~~~~~g~iD~li~nAG~~ 96 (256)
T PRK07889 76 ADRVREHVDGLDGVVHSIGFA 96 (256)
T ss_pred HHHHHHHcCCCcEEEEccccc
Confidence 65 479999999964
No 224
>PRK07985 oxidoreductase; Provisional
Probab=98.70 E-value=1.1e-07 Score=94.53 Aligned_cols=81 Identities=10% Similarity=0.055 Sum_probs=62.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~--~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
..++|+||+|+||+++++.|+++| ++|++.+|+. ++++++.+.+.. ...++.++.+|++|++++.++++
T Consensus 50 k~vlITGas~gIG~aia~~L~~~G-------~~Vi~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~ 121 (294)
T PRK07985 50 RKALVTGGDSGIGRAAAIAYAREG-------ADVAISYLPVEEEDAQDVKKIIEE-CGRKAVLLPGDLSDEKFARSLVHE 121 (294)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCC-------CEEEEecCCcchhhHHHHHHHHHH-cCCeEEEEEccCCCHHHHHHHHHH
Confidence 579999999999999999999998 7898888753 344444433321 12456788999999998887765
Q ss_pred ------CccEEeecCCCC
Q 012947 88 ------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (452)
++|++||++|..
T Consensus 122 ~~~~~g~id~lv~~Ag~~ 139 (294)
T PRK07985 122 AHKALGGLDIMALVAGKQ 139 (294)
T ss_pred HHHHhCCCCEEEECCCCC
Confidence 469999999853
No 225
>PRK08017 oxidoreductase; Provisional
Probab=98.70 E-value=5.5e-08 Score=93.69 Aligned_cols=74 Identities=26% Similarity=0.209 Sum_probs=61.7
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc----
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~---- 87 (452)
+++|+||+|++|+.++++|+++| ++|++++|+.++++.+.+ .++..+.+|++|.+++.++++
T Consensus 4 ~vlVtGasg~IG~~la~~l~~~g-------~~v~~~~r~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~i~~ 69 (256)
T PRK08017 4 SVLITGCSSGIGLEAALELKRRG-------YRVLAACRKPDDVARMNS-------LGFTGILLDLDDPESVERAADEVIA 69 (256)
T ss_pred EEEEECCCChHHHHHHHHHHHCC-------CEEEEEeCCHHHhHHHHh-------CCCeEEEeecCCHHHHHHHHHHHHH
Confidence 69999999999999999999988 799999999988866532 246788999999988776554
Q ss_pred ----CccEEeecCCCC
Q 012947 88 ----QTKLLLNCVGPY 99 (452)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (452)
..|.+||++|..
T Consensus 70 ~~~~~~~~ii~~ag~~ 85 (256)
T PRK08017 70 LTDNRLYGLFNNAGFG 85 (256)
T ss_pred hcCCCCeEEEECCCCC
Confidence 358999999853
No 226
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=98.70 E-value=1.2e-07 Score=92.12 Aligned_cols=73 Identities=16% Similarity=0.114 Sum_probs=62.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
...++|+||+|++|+.++++|+++| ++|++.+|+.++++ ..++..+.+|++|+++++++++
T Consensus 9 ~k~vlItG~s~gIG~~la~~l~~~G-------~~v~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~~~~~~ 71 (266)
T PRK06171 9 GKIIIVTGGSSGIGLAIVKELLANG-------ANVVNADIHGGDGQ----------HENYQFVPTDVSSAEEVNHTVAEI 71 (266)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCC-------CEEEEEeCCccccc----------cCceEEEEccCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 89999999876542 2356788999999999988776
Q ss_pred -----CccEEeecCCCC
Q 012947 88 -----QTKLLLNCVGPY 99 (452)
Q Consensus 88 -----~~dvVIn~aGp~ 99 (452)
+.|+||||+|..
T Consensus 72 ~~~~g~id~li~~Ag~~ 88 (266)
T PRK06171 72 IEKFGRIDGLVNNAGIN 88 (266)
T ss_pred HHHcCCCCEEEECCccc
Confidence 469999999954
No 227
>PRK12320 hypothetical protein; Provisional
Probab=98.70 E-value=8.3e-08 Score=105.07 Aligned_cols=95 Identities=17% Similarity=0.252 Sum_probs=76.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
|+|+|||||||+|++++++|++++ ++|.+.+|+.... ...+++++.+|+.|+. +.+++.++|
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G-------~~Vi~ldr~~~~~----------~~~~ve~v~~Dl~d~~-l~~al~~~D 62 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAG-------HTVSGIAQHPHDA----------LDPRVDYVCASLRNPV-LQELAGEAD 62 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCC-------CEEEEEeCChhhc----------ccCCceEEEccCCCHH-HHHHhcCCC
Confidence 479999999999999999999988 7999999875431 1236789999999984 888889999
Q ss_pred EEeecCCCCCCC--------CHHHHHHHHHhCCcEEEecCc
Q 012947 91 LLLNCVGPYRLH--------GDPVAAACVHSGCDYLDISGE 123 (452)
Q Consensus 91 vVIn~aGp~~~~--------~~~vv~ac~~~g~~yvDlsge 123 (452)
+|||++++.... ..+++++|.+.++..|.+|+.
T Consensus 63 ~VIHLAa~~~~~~~~vNv~Gt~nLleAA~~~GvRiV~~SS~ 103 (699)
T PRK12320 63 AVIHLAPVDTSAPGGVGITGLAHVANAAARAGARLLFVSQA 103 (699)
T ss_pred EEEEcCccCccchhhHHHHHHHHHHHHHHHcCCeEEEEECC
Confidence 999999853211 256899999999988877743
No 228
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.69 E-value=1.1e-07 Score=92.74 Aligned_cols=78 Identities=13% Similarity=0.072 Sum_probs=61.2
Q ss_pred CCeEEEEcC--CchHHHHHHHHHHHcCCCCCCCceEEEEEecC---hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 012947 10 LFDVIILGA--SGFTGKYVVREALKLFNFPSSPIKSLALAGRN---PTRVKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (452)
Q Consensus 10 ~~~ilV~GA--TG~iG~~va~~L~~~g~~~~~~~~~v~iagR~---~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~ 84 (452)
...++|+|| ++.||+.+++.|+++| ++|++.+|. .++++++.++++ ....+.+|++|++++++
T Consensus 6 ~k~vlItGas~~~GIG~a~a~~l~~~G-------~~v~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~Dv~d~~~v~~ 73 (260)
T PRK06997 6 GKRILITGLLSNRSIAYGIAKACKREG-------AELAFTYVGDRFKDRITEFAAEFG-----SDLVFPCDVASDEQIDA 73 (260)
T ss_pred CcEEEEeCCCCCCcHHHHHHHHHHHCC-------CeEEEEccchHHHHHHHHHHHhcC-----CcceeeccCCCHHHHHH
Confidence 357999996 6799999999999998 789887653 455555555432 23468899999999988
Q ss_pred HHc-------CccEEeecCCCC
Q 012947 85 LCS-------QTKLLLNCVGPY 99 (452)
Q Consensus 85 ~~~-------~~dvVIn~aGp~ 99 (452)
+++ +.|++|||||..
T Consensus 74 ~~~~~~~~~g~iD~lvnnAG~~ 95 (260)
T PRK06997 74 LFASLGQHWDGLDGLVHSIGFA 95 (260)
T ss_pred HHHHHHHHhCCCcEEEEccccC
Confidence 875 479999999964
No 229
>PLN02206 UDP-glucuronate decarboxylase
Probab=98.69 E-value=8.5e-08 Score=100.78 Aligned_cols=76 Identities=16% Similarity=0.270 Sum_probs=55.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHH-HHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRV-KQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl-~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
+.++|+|+|||||+|++++++|++++ ++|++++|..... +.+...+. ..+++++.+|+.++ .+.
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G-------~~V~~ld~~~~~~~~~~~~~~~---~~~~~~i~~D~~~~-----~l~ 182 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARG-------DSVIVVDNFFTGRKENVMHHFS---NPNFELIRHDVVEP-----ILL 182 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCc-------CEEEEEeCCCccchhhhhhhcc---CCceEEEECCccCh-----hhc
Confidence 45789999999999999999999998 7888888753221 12212121 24567888888664 346
Q ss_pred CccEEeecCCCC
Q 012947 88 QTKLLLNCVGPY 99 (452)
Q Consensus 88 ~~dvVIn~aGp~ 99 (452)
++|+|||+|+..
T Consensus 183 ~~D~ViHlAa~~ 194 (442)
T PLN02206 183 EVDQIYHLACPA 194 (442)
T ss_pred CCCEEEEeeeec
Confidence 799999999853
No 230
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=98.69 E-value=6.6e-08 Score=92.29 Aligned_cols=80 Identities=16% Similarity=0.067 Sum_probs=63.0
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh-HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~-kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
+++|+||+|++|+.+++.|+++| .+|++++|+.. ..+++...+.. ...++.++.+|+.|++++.++++
T Consensus 4 ~vlItG~s~~iG~~la~~l~~~g-------~~vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~ 75 (245)
T PRK12824 4 IALVTGAKRGIGSAIARELLNDG-------YRVIATYFSGNDCAKDWFEEYGF-TEDQVRLKELDVTDTEECAEALAEIE 75 (245)
T ss_pred EEEEeCCCchHHHHHHHHHHHcC-------CEEEEEeCCcHHHHHHHHHHhhc-cCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 79999999999999999999988 79999999853 33333333321 13457889999999999888776
Q ss_pred ----CccEEeecCCCC
Q 012947 88 ----QTKLLLNCVGPY 99 (452)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (452)
+.|+|||++|..
T Consensus 76 ~~~~~id~vi~~ag~~ 91 (245)
T PRK12824 76 EEEGPVDILVNNAGIT 91 (245)
T ss_pred HHcCCCCEEEECCCCC
Confidence 479999999853
No 231
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.68 E-value=1.8e-07 Score=91.00 Aligned_cols=80 Identities=15% Similarity=0.057 Sum_probs=59.9
Q ss_pred CeEEEEcCCc--hHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 11 FDVIILGASG--FTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 11 ~~ilV~GATG--~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
..++|+||++ .||+.+++.|+++| ++|++.+|+. +.++..+++.. ......++.+|++|+++++++++
T Consensus 9 k~~lITGas~~~GIG~a~a~~la~~G-------~~v~~~~r~~-~~~~~~~~l~~-~~g~~~~~~~Dv~~~~~v~~~~~~ 79 (260)
T PRK06603 9 KKGLITGIANNMSISWAIAQLAKKHG-------AELWFTYQSE-VLEKRVKPLAE-EIGCNFVSELDVTNPKSISNLFDD 79 (260)
T ss_pred cEEEEECCCCCcchHHHHHHHHHHcC-------CEEEEEeCch-HHHHHHHHHHH-hcCCceEEEccCCCHHHHHHHHHH
Confidence 5799999997 89999999999998 7999999984 33333333321 01122357899999999988875
Q ss_pred ------CccEEeecCCCC
Q 012947 88 ------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (452)
+.|+||||+|..
T Consensus 80 ~~~~~g~iDilVnnag~~ 97 (260)
T PRK06603 80 IKEKWGSFDFLLHGMAFA 97 (260)
T ss_pred HHHHcCCccEEEEccccC
Confidence 479999999853
No 232
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=98.68 E-value=7.3e-08 Score=89.93 Aligned_cols=112 Identities=13% Similarity=0.058 Sum_probs=82.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
+..+++|+||||.+|+.+++.|++.+ .+|.+++|+.++++++.+.+.. .....+..+|..|.+++.+.+++
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g-------~~V~l~~R~~~~~~~l~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~ 97 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREG-------ARVVLVGRDLERAQKAADSLRA--RFGEGVGAVETSDDAARAAAIKG 97 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC-------CEEEEEcCCHHHHHHHHHHHHh--hcCCcEEEeeCCCHHHHHHHHhc
Confidence 34689999999999999999999987 7999999999999888877631 12456777899999999999999
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHH
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERM 130 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~ 130 (452)
+|+||++.. ...+.....+.+.+.+.-.+|+...++....+
T Consensus 98 ~diVi~at~-~g~~~~~~~~~~~~~~~vv~D~~~~~~~~~~~ 138 (194)
T cd01078 98 ADVVFAAGA-AGVELLEKLAWAPKPLAVAADVNAVPPVGIEG 138 (194)
T ss_pred CCEEEECCC-CCceechhhhcccCceeEEEEccCCCCCCccc
Confidence 999999764 22221122222222345688888776655444
No 233
>PRK06128 oxidoreductase; Provisional
Probab=98.68 E-value=5e-08 Score=97.03 Aligned_cols=81 Identities=17% Similarity=0.137 Sum_probs=63.1
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh--HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT--RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~--kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
.+++|+||+|+||+.++++|+++| ++|++..|+.+ .++++.+.+.. ...++.++.+|++|+++++++++
T Consensus 56 k~vlITGas~gIG~~~a~~l~~~G-------~~V~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~ 127 (300)
T PRK06128 56 RKALITGADSGIGRATAIAFAREG-------ADIALNYLPEEEQDAAEVVQLIQA-EGRKAVALPGDLKDEAFCRQLVER 127 (300)
T ss_pred CEEEEecCCCcHHHHHHHHHHHcC-------CEEEEEeCCcchHHHHHHHHHHHH-cCCeEEEEecCCCCHHHHHHHHHH
Confidence 579999999999999999999998 78888877543 34444444321 12456788999999999888775
Q ss_pred ------CccEEeecCCCC
Q 012947 88 ------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (452)
+.|+||||||..
T Consensus 128 ~~~~~g~iD~lV~nAg~~ 145 (300)
T PRK06128 128 AVKELGGLDILVNIAGKQ 145 (300)
T ss_pred HHHHhCCCCEEEECCccc
Confidence 579999999853
No 234
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=98.67 E-value=2.6e-07 Score=88.73 Aligned_cols=84 Identities=14% Similarity=0.167 Sum_probs=65.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCC--CHHHHHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTT--DPPSLHRLC 86 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~--d~~sl~~~~ 86 (452)
+...++|+||+|++|..++++|++.| ++|++.+|+.++++++.+++......++.++.+|++ +++++.+++
T Consensus 11 ~~k~vlItG~~g~iG~~la~~l~~~G-------~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~ 83 (247)
T PRK08945 11 KDRIILVTGAGDGIGREAALTYARHG-------ATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLA 83 (247)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCC-------CcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHH
Confidence 45789999999999999999999988 799999999998887777664211235677888886 566555544
Q ss_pred c-------CccEEeecCCCC
Q 012947 87 S-------QTKLLLNCVGPY 99 (452)
Q Consensus 87 ~-------~~dvVIn~aGp~ 99 (452)
+ +.|+|||++|..
T Consensus 84 ~~~~~~~~~id~vi~~Ag~~ 103 (247)
T PRK08945 84 DTIEEQFGRLDGVLHNAGLL 103 (247)
T ss_pred HHHHHHhCCCCEEEECCccc
Confidence 3 579999999853
No 235
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=98.67 E-value=5.6e-08 Score=94.79 Aligned_cols=83 Identities=12% Similarity=0.099 Sum_probs=62.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHH----HH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLH----RL 85 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR-~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~----~~ 85 (452)
..++|+||+|+||+.+++.|+++| ++|++++| +.++++++.+++......++..+.+|++|++++. ++
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G-------~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~ 74 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEG-------YRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAI 74 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCC-------CeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHH
Confidence 368999999999999999999998 78888765 5677777776663211234567889999987653 33
Q ss_pred H-------cCccEEeecCCCCC
Q 012947 86 C-------SQTKLLLNCVGPYR 100 (452)
Q Consensus 86 ~-------~~~dvVIn~aGp~~ 100 (452)
+ .++|+||||||.+.
T Consensus 75 ~~~~~~~~g~iD~lv~nAG~~~ 96 (267)
T TIGR02685 75 IDACFRAFGRCDVLVNNASAFY 96 (267)
T ss_pred HHHHHHccCCceEEEECCccCC
Confidence 3 25899999999643
No 236
>PRK07577 short chain dehydrogenase; Provisional
Probab=98.67 E-value=1e-07 Score=90.52 Aligned_cols=71 Identities=15% Similarity=0.063 Sum_probs=60.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
..++|+||||++|+.++++|+++| ++|++.+|+.++ .. ...++.+|++|+++++++++
T Consensus 4 k~vlItG~s~~iG~~ia~~l~~~G-------~~v~~~~r~~~~------~~------~~~~~~~D~~~~~~~~~~~~~~~ 64 (234)
T PRK07577 4 RTVLVTGATKGIGLALSLRLANLG-------HQVIGIARSAID------DF------PGELFACDLADIEQTAATLAQIN 64 (234)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCC-------CEEEEEeCCccc------cc------CceEEEeeCCCHHHHHHHHHHHH
Confidence 479999999999999999999998 799999998764 11 12578999999999888776
Q ss_pred ---CccEEeecCCCCC
Q 012947 88 ---QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ---~~dvVIn~aGp~~ 100 (452)
++|+||||+|...
T Consensus 65 ~~~~~d~vi~~ag~~~ 80 (234)
T PRK07577 65 EIHPVDAIVNNVGIAL 80 (234)
T ss_pred HhCCCcEEEECCCCCC
Confidence 5799999999654
No 237
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=98.67 E-value=9.7e-08 Score=96.92 Aligned_cols=80 Identities=15% Similarity=0.231 Sum_probs=58.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceE-EEEEecChhH--HHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKS-LALAGRNPTR--VKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~-v~iagR~~~k--l~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
.+|+|+|||||+|+++++.|++++ .+ +++..|...+ ...+. .+. ...++.++.+|+.|.++++++++
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g-------~~~v~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~Dl~d~~~~~~~~~ 71 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINET-------SDAVVVVDKLTYAGNLMSLA-PVA--QSERFAFEKVDICDRAELARVFT 71 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcC-------CCEEEEEecCccccchhhhh-hcc--cCCceEEEECCCcChHHHHHHHh
Confidence 379999999999999999999988 44 4445554321 11111 111 12356788999999999999998
Q ss_pred C--ccEEeecCCCCC
Q 012947 88 Q--TKLLLNCVGPYR 100 (452)
Q Consensus 88 ~--~dvVIn~aGp~~ 100 (452)
+ +|+||||||...
T Consensus 72 ~~~~D~Vih~A~~~~ 86 (355)
T PRK10217 72 EHQPDCVMHLAAESH 86 (355)
T ss_pred hcCCCEEEECCcccC
Confidence 4 899999998653
No 238
>PRK06701 short chain dehydrogenase; Provisional
Probab=98.65 E-value=1.6e-07 Score=93.16 Aligned_cols=82 Identities=13% Similarity=0.073 Sum_probs=65.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh-HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT-RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~-kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...++|+||+|++|..++++|+++| ++|++++|+.+ .++.+.+.+.. ...++.++.+|++|.++++++++
T Consensus 46 ~k~iLItGasggIG~~la~~l~~~G-------~~V~l~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~ 117 (290)
T PRK06701 46 GKVALITGGDSGIGRAVAVLFAKEG-------ADIAIVYLDEHEDANETKQRVEK-EGVKCLLIPGDVSDEAFCKDAVEE 117 (290)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCC-------CEEEEEeCCcchHHHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHHH
Confidence 3579999999999999999999998 79999999854 34444444421 12457789999999999988775
Q ss_pred ------CccEEeecCCCC
Q 012947 88 ------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (452)
+.|+||||+|..
T Consensus 118 i~~~~~~iD~lI~~Ag~~ 135 (290)
T PRK06701 118 TVRELGRLDILVNNAAFQ 135 (290)
T ss_pred HHHHcCCCCEEEECCccc
Confidence 479999999864
No 239
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=98.65 E-value=8e-08 Score=92.33 Aligned_cols=74 Identities=16% Similarity=0.183 Sum_probs=61.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~- 88 (452)
..+++|+||+|++|+.++++|+++| ++|++.+|+. + .. ...++.++.+|+.|++++++++++
T Consensus 8 ~k~vlItGas~~iG~~la~~l~~~G-------~~v~~~~~~~--~----~~----~~~~~~~~~~D~~~~~~~~~~~~~~ 70 (252)
T PRK08220 8 GKTVWVTGAAQGIGYAVALAFVEAG-------AKVIGFDQAF--L----TQ----EDYPFATFVLDVSDAAAVAQVCQRL 70 (252)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCC-------CEEEEEecch--h----hh----cCCceEEEEecCCCHHHHHHHHHHH
Confidence 3579999999999999999999998 7999999986 1 11 124678899999999999988764
Q ss_pred ------ccEEeecCCCCC
Q 012947 89 ------TKLLLNCVGPYR 100 (452)
Q Consensus 89 ------~dvVIn~aGp~~ 100 (452)
.|+||||+|...
T Consensus 71 ~~~~~~id~vi~~ag~~~ 88 (252)
T PRK08220 71 LAETGPLDVLVNAAGILR 88 (252)
T ss_pred HHHcCCCCEEEECCCcCC
Confidence 799999999653
No 240
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.64 E-value=1.5e-07 Score=91.33 Aligned_cols=82 Identities=12% Similarity=0.052 Sum_probs=61.9
Q ss_pred CCeEEEEcCCc--hHHHHHHHHHHHcCCCCCCCceEEEEEecC-----------hhHHHHHHHHhCCCCCCCccEEEEeC
Q 012947 10 LFDVIILGASG--FTGKYVVREALKLFNFPSSPIKSLALAGRN-----------PTRVKQALQWASPSHSLSIPILTADT 76 (452)
Q Consensus 10 ~~~ilV~GATG--~iG~~va~~L~~~g~~~~~~~~~v~iagR~-----------~~kl~~l~~~l~~~~~~~v~~v~~Dl 76 (452)
...++|+|||| ++|+.++++|+++| .+|++++|+ .++++++.+++.. ...++.++.+|+
T Consensus 6 ~k~vlVtGas~~~giG~~~a~~l~~~G-------~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~D~ 77 (256)
T PRK12859 6 NKVAVVTGVSRLDGIGAAICKELAEAG-------ADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLK-NGVKVSSMELDL 77 (256)
T ss_pred CcEEEEECCCCCCChHHHHHHHHHHCC-------CeEEEEecccccccccccccHHHHHHHHHHHHh-cCCeEEEEEcCC
Confidence 35899999995 89999999999998 788887542 2333344444421 234677889999
Q ss_pred CCHHHHHHHHc-------CccEEeecCCCC
Q 012947 77 TDPPSLHRLCS-------QTKLLLNCVGPY 99 (452)
Q Consensus 77 ~d~~sl~~~~~-------~~dvVIn~aGp~ 99 (452)
+|.+++.++++ ..|+|||++|..
T Consensus 78 ~~~~~i~~~~~~~~~~~g~id~li~~ag~~ 107 (256)
T PRK12859 78 TQNDAPKELLNKVTEQLGYPHILVNNAAYS 107 (256)
T ss_pred CCHHHHHHHHHHHHHHcCCCcEEEECCCCC
Confidence 99999988875 369999999854
No 241
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.64 E-value=8.2e-08 Score=92.85 Aligned_cols=81 Identities=14% Similarity=0.044 Sum_probs=61.4
Q ss_pred CeEEEEcCCc--hHHHHHHHHHHHcCCCCCCCceEEEEEecC-----------hhHHHHHHHHhCCCCCCCccEEEEeCC
Q 012947 11 FDVIILGASG--FTGKYVVREALKLFNFPSSPIKSLALAGRN-----------PTRVKQALQWASPSHSLSIPILTADTT 77 (452)
Q Consensus 11 ~~ilV~GATG--~iG~~va~~L~~~g~~~~~~~~~v~iagR~-----------~~kl~~l~~~l~~~~~~~v~~v~~Dl~ 77 (452)
..++|+|||| ++|+.++++|+++| ++|++.+|+ ......+.+++.. ...++.++.+|++
T Consensus 6 k~vlItGas~~~giG~~la~~l~~~G-------~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~ 77 (256)
T PRK12748 6 KIALVTGASRLNGIGAAVCRRLAAKG-------IDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIES-YGVRCEHMEIDLS 77 (256)
T ss_pred cEEEEeCCCCCCCHHHHHHHHHHHcC-------CcEEEEcCCccccccccccchhhHHHHHHHHHh-cCCeEEEEECCCC
Confidence 4699999995 79999999999998 789999987 2221123333321 1346788999999
Q ss_pred CHHHHHHHHc-------CccEEeecCCCC
Q 012947 78 DPPSLHRLCS-------QTKLLLNCVGPY 99 (452)
Q Consensus 78 d~~sl~~~~~-------~~dvVIn~aGp~ 99 (452)
|++++.++++ ..|+|||++|..
T Consensus 78 ~~~~~~~~~~~~~~~~g~id~vi~~ag~~ 106 (256)
T PRK12748 78 QPYAPNRVFYAVSERLGDPSILINNAAYS 106 (256)
T ss_pred CHHHHHHHHHHHHHhCCCCCEEEECCCcC
Confidence 9999887765 369999999864
No 242
>PLN00015 protochlorophyllide reductase
Probab=98.64 E-value=7e-08 Score=96.46 Aligned_cols=79 Identities=19% Similarity=0.167 Sum_probs=66.2
Q ss_pred EEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc------
Q 012947 14 IILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS------ 87 (452)
Q Consensus 14 lV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~------ 87 (452)
+|+||+++||..++++|+++|. ++|++.+|+.++++++.+++.. ...++.++.+|++|.++++++++
T Consensus 1 lITGas~GIG~aia~~l~~~G~------~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 73 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGK------WHVVMACRDFLKAERAAKSAGM-PKDSYTVMHLDLASLDSVRQFVDNFRRSG 73 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCC------CEEEEEeCCHHHHHHHHHHhcC-CCCeEEEEEecCCCHHHHHHHHHHHHhcC
Confidence 6999999999999999999873 5899999999998888777642 12356788999999999988775
Q ss_pred -CccEEeecCCCC
Q 012947 88 -QTKLLLNCVGPY 99 (452)
Q Consensus 88 -~~dvVIn~aGp~ 99 (452)
..|+||||||..
T Consensus 74 ~~iD~lInnAG~~ 86 (308)
T PLN00015 74 RPLDVLVCNAAVY 86 (308)
T ss_pred CCCCEEEECCCcC
Confidence 479999999964
No 243
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.64 E-value=2e-07 Score=89.46 Aligned_cols=81 Identities=14% Similarity=0.114 Sum_probs=61.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR-~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
..+++|+||+|++|+.++++|++++ +++++..| +.+.+....+.+.. ...++.++.+|++|++++.++++
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g-------~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~ 77 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEG-------SLVVVNAKKRAEEMNETLKMVKE-NGGEGIGVLADVSTREGCETLAKA 77 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCC-------CEEEEEeCCChHHHHHHHHHHHH-cCCeeEEEEeccCCHHHHHHHHHH
Confidence 3579999999999999999999988 78877775 44444444433321 12356688899999999888776
Q ss_pred ------CccEEeecCCC
Q 012947 88 ------QTKLLLNCVGP 98 (452)
Q Consensus 88 ------~~dvVIn~aGp 98 (452)
+.|+|||++|.
T Consensus 78 ~~~~~~~~d~vi~~ag~ 94 (252)
T PRK06077 78 TIDRYGVADILVNNAGL 94 (252)
T ss_pred HHHHcCCCCEEEECCCC
Confidence 47999999985
No 244
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=98.63 E-value=2.1e-07 Score=92.55 Aligned_cols=79 Identities=18% Similarity=0.321 Sum_probs=59.7
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--Cc
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--QT 89 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--~~ 89 (452)
+|+|+||||++|+.+++.|++++ ++|.+.+|......+...... ...++.++.+|++|++++.++++ ++
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g-------~~V~~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~ 71 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESG-------HEVVVLDNLSNGSPEALKRGE--RITRVTFVEGDLRDRELLDRLFEEHKI 71 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCC-------CeEEEEeCCCccchhhhhhhc--cccceEEEECCCCCHHHHHHHHHhCCC
Confidence 58999999999999999999988 688877664332222222211 01256788999999999999987 68
Q ss_pred cEEeecCCCC
Q 012947 90 KLLLNCVGPY 99 (452)
Q Consensus 90 dvVIn~aGp~ 99 (452)
|+||||+|..
T Consensus 72 d~vv~~ag~~ 81 (328)
T TIGR01179 72 DAVIHFAGLI 81 (328)
T ss_pred cEEEECcccc
Confidence 9999999965
No 245
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=98.63 E-value=1.2e-07 Score=90.17 Aligned_cols=79 Identities=14% Similarity=0.174 Sum_probs=62.8
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh-hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC---
Q 012947 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ--- 88 (452)
Q Consensus 13 ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~-~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~--- 88 (452)
++|+|++|++|+.++++|+++| +++++++|+. ++++.+.+.+.. ...++.++.+|++|++++++++++
T Consensus 1 vlItG~~g~iG~~la~~l~~~G-------~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~ 72 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEG-------AKVIITYRSSEEGAEEVVEELKA-YGVKALGVVCDVSDREDVKAVVEEIEE 72 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCC-------CEEEEEeCCchhHHHHHHHHHHh-cCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 5899999999999999999998 7899998875 455555444421 123577899999999999888764
Q ss_pred ----ccEEeecCCCC
Q 012947 89 ----TKLLLNCVGPY 99 (452)
Q Consensus 89 ----~dvVIn~aGp~ 99 (452)
.|+|||++|..
T Consensus 73 ~~~~id~vi~~ag~~ 87 (239)
T TIGR01830 73 ELGPIDILVNNAGIT 87 (239)
T ss_pred HhCCCCEEEECCCCC
Confidence 59999999964
No 246
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=98.63 E-value=2.3e-07 Score=102.43 Aligned_cols=105 Identities=13% Similarity=0.243 Sum_probs=77.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC- 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~--~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~- 86 (452)
.++|+|+|||||||++++++|+++++ .++|.+.+|.. ++++.+.... ...++.++.+|++|.+.+.+++
T Consensus 6 ~~~VLVTGatGfIG~~lv~~Ll~~g~-----~~~V~~~d~~~~~~~~~~l~~~~---~~~~v~~~~~Dl~d~~~~~~~~~ 77 (668)
T PLN02260 6 PKNILITGAAGFIASHVANRLIRNYP-----DYKIVVLDKLDYCSNLKNLNPSK---SSPNFKFVKGDIASADLVNYLLI 77 (668)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHhCC-----CCEEEEEeCCCccchhhhhhhcc---cCCCeEEEECCCCChHHHHHHHh
Confidence 46899999999999999999999852 16888888742 2333322211 1246889999999999888765
Q ss_pred -cCccEEeecCCCCCCC----------------CHHHHHHHHHhC-C-cEEEecC
Q 012947 87 -SQTKLLLNCVGPYRLH----------------GDPVAAACVHSG-C-DYLDISG 122 (452)
Q Consensus 87 -~~~dvVIn~aGp~~~~----------------~~~vv~ac~~~g-~-~yvDlsg 122 (452)
.++|+|||+|+..... ...++++|.+.+ + ++|.++.
T Consensus 78 ~~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS 132 (668)
T PLN02260 78 TEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVST 132 (668)
T ss_pred hcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Confidence 5799999999864321 145889999877 4 6887764
No 247
>PRK05865 hypothetical protein; Provisional
Probab=98.62 E-value=2.2e-07 Score=103.80 Aligned_cols=97 Identities=16% Similarity=0.180 Sum_probs=78.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
++|+|+|||||+|++++++|+++| ++|++.+|+.... + ..++.++.+|+.|.+++.++++++|
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G-------~~Vv~l~R~~~~~------~----~~~v~~v~gDL~D~~~l~~al~~vD 63 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQG-------HEVVGIARHRPDS------W----PSSADFIAADIRDATAVESAMTGAD 63 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCc-------CEEEEEECCchhh------c----ccCceEEEeeCCCHHHHHHHHhCCC
Confidence 479999999999999999999998 7999999975321 1 1257889999999999999999999
Q ss_pred EEeecCCCCCCC-------CHHHHHHHHHhCC-cEEEecCcH
Q 012947 91 LLLNCVGPYRLH-------GDPVAAACVHSGC-DYLDISGEP 124 (452)
Q Consensus 91 vVIn~aGp~~~~-------~~~vv~ac~~~g~-~yvDlsge~ 124 (452)
+|||||+..... ..+++++|.+.++ ++|.++...
T Consensus 64 ~VVHlAa~~~~~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~ 105 (854)
T PRK05865 64 VVAHCAWVRGRNDHINIDGTANVLKAMAETGTGRIVFTSSGH 105 (854)
T ss_pred EEEECCCcccchHHHHHHHHHHHHHHHHHcCCCeEEEECCcH
Confidence 999999864321 2568899999887 678777643
No 248
>PRK07201 short chain dehydrogenase; Provisional
Probab=98.61 E-value=2.3e-07 Score=102.01 Aligned_cols=100 Identities=17% Similarity=0.292 Sum_probs=73.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHH--cCCCCCCCceEEEEEecChh--HHHHHHHHhCCCCCCCccEEEEeCCCH------H
Q 012947 11 FDVIILGASGFTGKYVVREALK--LFNFPSSPIKSLALAGRNPT--RVKQALQWASPSHSLSIPILTADTTDP------P 80 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~--~g~~~~~~~~~v~iagR~~~--kl~~l~~~l~~~~~~~v~~v~~Dl~d~------~ 80 (452)
++|+|||||||+|++++++|++ .+ .+|.+++|+.. +++.+...+. ..++.++.+|+.|+ +
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g-------~~V~~l~R~~~~~~~~~~~~~~~---~~~v~~~~~Dl~~~~~~~~~~ 70 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRRE-------ATVHVLVRRQSLSRLEALAAYWG---ADRVVPLVGDLTEPGLGLSEA 70 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCC-------CEEEEEECcchHHHHHHHHHhcC---CCcEEEEecccCCccCCcCHH
Confidence 4799999999999999999995 44 78999999653 3333333321 24688999999984 5
Q ss_pred HHHHHHcCccEEeecCCCCCCC-------------CHHHHHHHHHhCC-cEEEec
Q 012947 81 SLHRLCSQTKLLLNCVGPYRLH-------------GDPVAAACVHSGC-DYLDIS 121 (452)
Q Consensus 81 sl~~~~~~~dvVIn~aGp~~~~-------------~~~vv~ac~~~g~-~yvDls 121 (452)
.++++ +++|+||||||.+... ..+++++|.+.++ ++|.++
T Consensus 71 ~~~~l-~~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~S 124 (657)
T PRK07201 71 DIAEL-GDIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQAATFHHVS 124 (657)
T ss_pred HHHHh-cCCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEe
Confidence 66666 8999999999865321 1567888988865 466555
No 249
>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]
Probab=98.61 E-value=8.6e-07 Score=83.15 Aligned_cols=118 Identities=20% Similarity=0.191 Sum_probs=83.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEE-EecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLAL-AGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~i-agR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
..++|+||+.+||.-++++|.+... .++++ ..|++++..+..+.... .+.++.+++.|+++.++++++++
T Consensus 4 ksv~ItGaNRGIGlgLVk~llk~~~------i~~iiat~r~~e~a~~~l~~k~~-~d~rvHii~Ldvt~deS~~~~~~~V 76 (249)
T KOG1611|consen 4 KSVFITGANRGIGLGLVKELLKDKG------IEVIIATARDPEKAATELALKSK-SDSRVHIIQLDVTCDESIDNFVQEV 76 (249)
T ss_pred ccEEEeccCcchhHHHHHHHhcCCC------cEEEEEecCChHHhhHHHHHhhc-cCCceEEEEEecccHHHHHHHHHHH
Confidence 3599999999999999999997752 45544 55678885444443321 35789999999999999988876
Q ss_pred -------CccEEeecCCCCCCCC------HHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHh
Q 012947 88 -------QTKLLLNCVGPYRLHG------DPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVE 140 (452)
Q Consensus 88 -------~~dvVIn~aGp~~~~~------~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~ 140 (452)
+.+++|||||.+..|. ..++-.|.+ ++..|.....+.+.+.+...+.+
T Consensus 77 ~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~-----tN~v~~il~~Q~~lPLLkkaas~ 137 (249)
T KOG1611|consen 77 EKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYE-----TNAVGPILLTQAFLPLLKKAASK 137 (249)
T ss_pred HhhcccCCceEEEeccceeeecccccCCcHHHHHHHhh-----hcchhHHHHHHHHHHHHHHHhhc
Confidence 4699999999766553 334444444 34446666667776666555543
No 250
>PLN00016 RNA-binding protein; Provisional
Probab=98.60 E-value=8.9e-08 Score=98.51 Aligned_cols=101 Identities=22% Similarity=0.248 Sum_probs=75.6
Q ss_pred CCCeEEEE----cCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHH-------HHhCCCCCCCccEEEEeCC
Q 012947 9 ELFDVIIL----GASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQAL-------QWASPSHSLSIPILTADTT 77 (452)
Q Consensus 9 ~~~~ilV~----GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~-------~~l~~~~~~~v~~v~~Dl~ 77 (452)
...+|+|+ |||||+|++++++|+++| ++|.++.|+.++...+. .++. ...+.++.+|+.
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G-------~~V~~l~R~~~~~~~~~~~~~~~~~~l~---~~~v~~v~~D~~ 120 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAG-------HEVTLFTRGKEPSQKMKKEPFSRFSELS---SAGVKTVWGDPA 120 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHCC-------CEEEEEecCCcchhhhccCchhhhhHhh---hcCceEEEecHH
Confidence 34689999 999999999999999998 89999999876532221 1111 134788999987
Q ss_pred CHHHHHHHH--cCccEEeecCCCCCCCCHHHHHHHHHhCC-cEEEecC
Q 012947 78 DPPSLHRLC--SQTKLLLNCVGPYRLHGDPVAAACVHSGC-DYLDISG 122 (452)
Q Consensus 78 d~~sl~~~~--~~~dvVIn~aGp~~~~~~~vv~ac~~~g~-~yvDlsg 122 (452)
| +.+++ .++|+|||+++.......+++++|.+.|+ ++|.++.
T Consensus 121 d---~~~~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS 165 (378)
T PLN00016 121 D---VKSKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSS 165 (378)
T ss_pred H---HHhhhccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 7 44444 47899999987543334688999999888 6777765
No 251
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.60 E-value=3.5e-07 Score=84.86 Aligned_cols=138 Identities=17% Similarity=0.174 Sum_probs=92.9
Q ss_pred CCCCCeEEEEcCC-chHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 012947 7 IPELFDVIILGAS-GFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 7 ~~~~~~ilV~GAT-G~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
++++..|+|+|++ |+||.++++++++.| +.|....|+.+...++..+. .+.....|+++++++.+.
T Consensus 4 ~~~~k~VlItgcs~GGIG~ala~ef~~~G-------~~V~AtaR~~e~M~~L~~~~------gl~~~kLDV~~~~~V~~v 70 (289)
T KOG1209|consen 4 QSQPKKVLITGCSSGGIGYALAKEFARNG-------YLVYATARRLEPMAQLAIQF------GLKPYKLDVSKPEEVVTV 70 (289)
T ss_pred ccCCCeEEEeecCCcchhHHHHHHHHhCC-------eEEEEEccccchHhhHHHhh------CCeeEEeccCChHHHHHH
Confidence 3456678888865 889999999999999 99999999999988887654 478899999999998876
Q ss_pred Hc--------CccEEeecCCCCCC-----CCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEE--cCCC
Q 012947 86 CS--------QTKLLLNCVGPYRL-----HGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLV--SACG 150 (452)
Q Consensus 86 ~~--------~~dvVIn~aGp~~~-----~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv--~~~G 150 (452)
.. +.|+++|+||.... .....++.|. -+++-|.....+.+. |...+++|-++. +-.|
T Consensus 71 ~~evr~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f-----~vNvfG~irM~~a~~---h~likaKGtIVnvgSl~~ 142 (289)
T KOG1209|consen 71 SGEVRANPDGKLDLLYNNAGQSCTFPALDATIAAVEQCF-----KVNVFGHIRMCRALS---HFLIKAKGTIVNVGSLAG 142 (289)
T ss_pred HHHHhhCCCCceEEEEcCCCCCcccccccCCHHHHHhhh-----ccceeeeehHHHHHH---HHHHHccceEEEecceeE
Confidence 54 46999999984322 2223333333 345556555555553 455555554432 4445
Q ss_pred CCcchhhHHHHHHhhh
Q 012947 151 FDSIPAELGVMFNSRQ 166 (452)
Q Consensus 151 ~~s~P~dl~~~~~~~~ 166 (452)
+-+.|. -++|.+.|.
T Consensus 143 ~vpfpf-~~iYsAsKA 157 (289)
T KOG1209|consen 143 VVPFPF-GSIYSASKA 157 (289)
T ss_pred Eeccch-hhhhhHHHH
Confidence 545553 244555443
No 252
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.57 E-value=2.4e-07 Score=88.17 Aligned_cols=81 Identities=25% Similarity=0.210 Sum_probs=67.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~-- 88 (452)
.+++|+||+|++|+.+++.|+++| ++|++.+|+.++++++.+++.. ..++.++.+|++|++++++++++
T Consensus 6 ~~vlItGa~g~iG~~~a~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~ 76 (238)
T PRK05786 6 KKVAIIGVSEGLGYAVAYFALKEG-------AQVCINSRNENKLKRMKKTLSK--YGNIHYVVGDVSSTESARNVIEKAA 76 (238)
T ss_pred cEEEEECCCchHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHHh--cCCeEEEECCCCCHHHHHHHHHHHH
Confidence 579999999999999999999998 7999999999988777665531 23578889999999999887653
Q ss_pred -----ccEEeecCCCCC
Q 012947 89 -----TKLLLNCVGPYR 100 (452)
Q Consensus 89 -----~dvVIn~aGp~~ 100 (452)
.|.+|+++|.+.
T Consensus 77 ~~~~~id~ii~~ag~~~ 93 (238)
T PRK05786 77 KVLNAIDGLVVTVGGYV 93 (238)
T ss_pred HHhCCCCEEEEcCCCcC
Confidence 599999998654
No 253
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=98.56 E-value=2.6e-07 Score=90.75 Aligned_cols=59 Identities=24% Similarity=0.311 Sum_probs=52.2
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc--
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT-- 89 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~-- 89 (452)
+|+|+|||||+|++++++|.++| ++|.+..|+ .+|+.|++++.+++++.
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g-------~~v~~~~r~----------------------~~d~~~~~~~~~~~~~~~~ 51 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEG-------RVVVALTSS----------------------QLDLTDPEALERLLRAIRP 51 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcC-------CEEEEeCCc----------------------ccCCCCHHHHHHHHHhCCC
Confidence 48999999999999999999988 789888884 25888999999999865
Q ss_pred cEEeecCCCC
Q 012947 90 KLLLNCVGPY 99 (452)
Q Consensus 90 dvVIn~aGp~ 99 (452)
|+||||+|+.
T Consensus 52 d~vi~~a~~~ 61 (287)
T TIGR01214 52 DAVVNTAAYT 61 (287)
T ss_pred CEEEECCccc
Confidence 9999999864
No 254
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=98.55 E-value=4.4e-07 Score=91.99 Aligned_cols=80 Identities=20% Similarity=0.279 Sum_probs=57.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~--~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
++|+|+|||||+|++++++|++++. ..+++..|.. ...+.+. .+. ...++.++.+|+.|.+++.+++++
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~------~~v~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~Dl~d~~~~~~~~~~ 71 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQ------DSVVNVDKLTYAGNLESLA-DVS--DSERYVFEHADICDRAELDRIFAQ 71 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCC------CeEEEecCCCccchHHHHH-hcc--cCCceEEEEecCCCHHHHHHHHHh
Confidence 4799999999999999999999872 2344444422 2222222 221 123567889999999999999974
Q ss_pred --ccEEeecCCCC
Q 012947 89 --TKLLLNCVGPY 99 (452)
Q Consensus 89 --~dvVIn~aGp~ 99 (452)
+|+||||||..
T Consensus 72 ~~~d~vih~A~~~ 84 (352)
T PRK10084 72 HQPDAVMHLAAES 84 (352)
T ss_pred cCCCEEEECCccc
Confidence 89999999864
No 255
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=98.54 E-value=7.4e-07 Score=89.90 Aligned_cols=84 Identities=19% Similarity=0.310 Sum_probs=61.1
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhH------HHHHHHHhCCC--C-C-CCccEEEEeCCC---
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR------VKQALQWASPS--H-S-LSIPILTADTTD--- 78 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~k------l~~l~~~l~~~--~-~-~~v~~v~~Dl~d--- 78 (452)
+|+|+|||||+|++++++|++++. ..+|.+..|+.++ +++..+..... . . .++.++.+|+++
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~-----~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 75 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRST-----QAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRL 75 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCC-----CCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccC
Confidence 489999999999999999999872 1579999997652 22222222110 0 0 467888999875
Q ss_pred ---HHHHHHHHcCccEEeecCCCCC
Q 012947 79 ---PPSLHRLCSQTKLLLNCVGPYR 100 (452)
Q Consensus 79 ---~~sl~~~~~~~dvVIn~aGp~~ 100 (452)
.+.+..+.+++|+||||++...
T Consensus 76 gl~~~~~~~~~~~~d~vih~a~~~~ 100 (367)
T TIGR01746 76 GLSDAEWERLAENVDTIVHNGALVN 100 (367)
T ss_pred CcCHHHHHHHHhhCCEEEeCCcEec
Confidence 3567788889999999998654
No 256
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.52 E-value=5.3e-07 Score=94.82 Aligned_cols=78 Identities=13% Similarity=0.070 Sum_probs=63.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC--hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN--PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~--~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
...++|+||+|++|+.++++|+++| .++++.+|+ .++++++.+++ +..++.+|++|+++++++++
T Consensus 210 g~~vlItGasggIG~~la~~l~~~G-------a~vi~~~~~~~~~~l~~~~~~~------~~~~~~~Dv~~~~~~~~~~~ 276 (450)
T PRK08261 210 GKVALVTGAARGIGAAIAEVLARDG-------AHVVCLDVPAAGEALAAVANRV------GGTALALDITAPDAPARIAE 276 (450)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCC-------CEEEEEeCCccHHHHHHHHHHc------CCeEEEEeCCCHHHHHHHHH
Confidence 4679999999999999999999998 799999884 45566665544 23578899999999888776
Q ss_pred -------CccEEeecCCCCC
Q 012947 88 -------QTKLLLNCVGPYR 100 (452)
Q Consensus 88 -------~~dvVIn~aGp~~ 100 (452)
+.|+||||+|...
T Consensus 277 ~~~~~~g~id~vi~~AG~~~ 296 (450)
T PRK08261 277 HLAERHGGLDIVVHNAGITR 296 (450)
T ss_pred HHHHhCCCCCEEEECCCcCC
Confidence 4799999999653
No 257
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=98.52 E-value=4.6e-07 Score=87.76 Aligned_cols=83 Identities=16% Similarity=0.301 Sum_probs=54.4
Q ss_pred EEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh---HHHHHHHHhCCC---------CCCCccEEEEeCCCH---
Q 012947 15 ILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT---RVKQALQWASPS---------HSLSIPILTADTTDP--- 79 (452)
Q Consensus 15 V~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~---kl~~l~~~l~~~---------~~~~v~~v~~Dl~d~--- 79 (452)
|||||||+|++++++|+++.+ ..+|.+..|+.+ ..+++.+.+... ...++.++.+|++++
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~-----~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lG 75 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPP-----DVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLG 75 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS------TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG
T ss_pred CcCCCcHHHHHHHHHHHcCCC-----CcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccC
Confidence 799999999999999999973 138999999763 344444443220 146899999999875
Q ss_pred ---HHHHHHHcCccEEeecCCCCCCC
Q 012947 80 ---PSLHRLCSQTKLLLNCVGPYRLH 102 (452)
Q Consensus 80 ---~sl~~~~~~~dvVIn~aGp~~~~ 102 (452)
+..+.+.+++|+|||||+.....
T Consensus 76 L~~~~~~~L~~~v~~IiH~Aa~v~~~ 101 (249)
T PF07993_consen 76 LSDEDYQELAEEVDVIIHCAASVNFN 101 (249)
T ss_dssp --HHHHHHHHHH--EEEE--SS-SBS
T ss_pred CChHHhhccccccceeeecchhhhhc
Confidence 56788889999999999876543
No 258
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=98.50 E-value=1.4e-07 Score=93.46 Aligned_cols=87 Identities=26% Similarity=0.462 Sum_probs=60.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--C
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--Q 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--~ 88 (452)
|+|+|+||+|++|++++++|.+++ +++....|+ ..|+.|.+++.++++ +
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~-------~~v~~~~r~----------------------~~dl~d~~~~~~~~~~~~ 51 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERG-------YEVIATSRS----------------------DLDLTDPEAVAKLLEAFK 51 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTS-------EEEEEESTT----------------------CS-TTSHHHHHHHHHHH-
T ss_pred CEEEEECCCCHHHHHHHHHHhhCC-------CEEEEeCch----------------------hcCCCCHHHHHHHHHHhC
Confidence 689999999999999999999877 788888776 247889999999987 4
Q ss_pred ccEEeecCCCCCCC----------------CHHHHHHHHHhCCcEEEecCcHHH
Q 012947 89 TKLLLNCVGPYRLH----------------GDPVAAACVHSGCDYLDISGEPEF 126 (452)
Q Consensus 89 ~dvVIn~aGp~~~~----------------~~~vv~ac~~~g~~yvDlsge~~~ 126 (452)
.|+|||||+..... ...++++|.+.+.++|.+|.+..|
T Consensus 52 pd~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~~li~~STd~VF 105 (286)
T PF04321_consen 52 PDVVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKERGARLIHISTDYVF 105 (286)
T ss_dssp -SEEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT-EEEEEEEGGGS
T ss_pred CCeEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCCcEEEeeccEEE
Confidence 89999999753211 145666777777777766654433
No 259
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=98.50 E-value=1.2e-06 Score=85.20 Aligned_cols=104 Identities=16% Similarity=0.210 Sum_probs=75.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC--hhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN--PTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~--~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
+++||+||.||||+..+++++++.+. .+|+..+.- ...++.+..-. ..++..++++|+.|.+.+.++++
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d-----~~v~~~DkLTYAgn~~~l~~~~---~~~~~~fv~~DI~D~~~v~~~~~~ 72 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPD-----DHVVNLDKLTYAGNLENLADVE---DSPRYRFVQGDICDRELVDRLFKE 72 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCC-----ceEEEEecccccCCHHHHHhhh---cCCCceEEeccccCHHHHHHHHHh
Confidence 47999999999999999999998842 566766651 22333332222 24688999999999999999999
Q ss_pred -CccEEeecCCCCCC------------C---C-HHHHHHHHHhCC--cEEEecC
Q 012947 88 -QTKLLLNCVGPYRL------------H---G-DPVAAACVHSGC--DYLDISG 122 (452)
Q Consensus 88 -~~dvVIn~aGp~~~------------~---~-~~vv~ac~~~g~--~yvDlsg 122 (452)
+.|+|+|.|.-... + | ..+++|+.+.+. +|+++|.
T Consensus 73 ~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HIST 126 (340)
T COG1088 73 YQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHIST 126 (340)
T ss_pred cCCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEecc
Confidence 69999999863221 1 1 567777777764 6777764
No 260
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=98.49 E-value=6.9e-07 Score=88.72 Aligned_cols=73 Identities=14% Similarity=0.127 Sum_probs=53.4
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc----C
Q 012947 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS----Q 88 (452)
Q Consensus 13 ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~----~ 88 (452)
|+|+|||||+|+++++.|.+++. ..|.+.+|..... .+. ++ ....+..|+++++.++.+.+ +
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~------~~v~~~~~~~~~~-~~~-~~------~~~~~~~d~~~~~~~~~~~~~~~~~ 66 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGI------TDILVVDNLRDGH-KFL-NL------ADLVIADYIDKEDFLDRLEKGAFGK 66 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCC------ceEEEEecCCCch-hhh-hh------hheeeeccCcchhHHHHHHhhccCC
Confidence 68999999999999999999882 2687777754321 111 11 11345678888888877764 7
Q ss_pred ccEEeecCCCC
Q 012947 89 TKLLLNCVGPY 99 (452)
Q Consensus 89 ~dvVIn~aGp~ 99 (452)
+|+|||+|++.
T Consensus 67 ~D~vvh~A~~~ 77 (314)
T TIGR02197 67 IEAIFHQGACS 77 (314)
T ss_pred CCEEEECcccc
Confidence 99999999864
No 261
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=98.48 E-value=4.5e-07 Score=90.17 Aligned_cols=68 Identities=16% Similarity=0.189 Sum_probs=43.5
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCC---HHH-HHHHHc-
Q 012947 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTD---PPS-LHRLCS- 87 (452)
Q Consensus 13 ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d---~~s-l~~~~~- 87 (452)
|+|+|||||+|++++++|++.| ++++++.|+....... .. +..+|+.| .++ ++++++
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g-------~~~v~~~~~~~~~~~~-~~----------~~~~~~~d~~~~~~~~~~~~~~ 63 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKG-------ITDILVVDNLKDGTKF-VN----------LVDLDIADYMDKEDFLAQIMAG 63 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCC-------CceEEEecCCCcchHH-Hh----------hhhhhhhhhhhHHHHHHHHhcc
Confidence 8999999999999999999988 6555555554322111 00 11234433 333 333332
Q ss_pred ----CccEEeecCCC
Q 012947 88 ----QTKLLLNCVGP 98 (452)
Q Consensus 88 ----~~dvVIn~aGp 98 (452)
++|+|||+|+.
T Consensus 64 ~~~~~~d~Vih~A~~ 78 (308)
T PRK11150 64 DDFGDIEAIFHEGAC 78 (308)
T ss_pred cccCCccEEEECcee
Confidence 68999999973
No 262
>PRK06953 short chain dehydrogenase; Provisional
Probab=98.48 E-value=5.8e-07 Score=85.07 Aligned_cols=74 Identities=24% Similarity=0.264 Sum_probs=63.1
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc----
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~---- 87 (452)
+++|+||+|++|+.++++|+++| ++|++++|+.++++++.. ..+.++.+|++|.++++++++
T Consensus 3 ~vlvtG~sg~iG~~la~~L~~~G-------~~v~~~~r~~~~~~~~~~-------~~~~~~~~D~~~~~~v~~~~~~~~~ 68 (222)
T PRK06953 3 TVLIVGASRGIGREFVRQYRADG-------WRVIATARDAAALAALQA-------LGAEALALDVADPASVAGLAWKLDG 68 (222)
T ss_pred eEEEEcCCCchhHHHHHHHHhCC-------CEEEEEECCHHHHHHHHh-------ccceEEEecCCCHHHHHHHHHHhcC
Confidence 69999999999999999999988 799999999888766543 135689999999999988653
Q ss_pred -CccEEeecCCCC
Q 012947 88 -QTKLLLNCVGPY 99 (452)
Q Consensus 88 -~~dvVIn~aGp~ 99 (452)
+.|+|||++|..
T Consensus 69 ~~~d~vi~~ag~~ 81 (222)
T PRK06953 69 EALDAAVYVAGVY 81 (222)
T ss_pred CCCCEEEECCCcc
Confidence 479999999976
No 263
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=98.48 E-value=5.8e-07 Score=89.26 Aligned_cols=138 Identities=12% Similarity=0.061 Sum_probs=95.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh---hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP---TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~---~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
..+++|+|| |++|++++..|++.|. .+|.+.+|+. ++++++.+++.. ....+.+..+|++|.+++.+.+
T Consensus 126 ~k~vlI~GA-GGagrAia~~La~~G~------~~V~I~~R~~~~~~~a~~l~~~l~~-~~~~~~~~~~d~~~~~~~~~~~ 197 (289)
T PRK12548 126 GKKLTVIGA-GGAATAIQVQCALDGA------KEITIFNIKDDFYERAEQTAEKIKQ-EVPECIVNVYDLNDTEKLKAEI 197 (289)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCC------CEEEEEeCCchHHHHHHHHHHHHhh-cCCCceeEEechhhhhHHHhhh
Confidence 357999999 7999999999999982 3599999997 788888777642 1224456678999888899999
Q ss_pred cCccEEeecCCCCCCC---CHHH-HHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHH
Q 012947 87 SQTKLLLNCVGPYRLH---GDPV-AAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMF 162 (452)
Q Consensus 87 ~~~dvVIn~aGp~~~~---~~~v-v~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~ 162 (452)
+.+|+||||..+.... ..++ ....+..+...+|+...+.-+. +-..|++.|..++++. +|..+-
T Consensus 198 ~~~DilINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P~~T~-----ll~~A~~~G~~~~~G~-------~ML~~Q 265 (289)
T PRK12548 198 ASSDILVNATLVGMKPNDGETNIKDTSVFRKDLVVADTVYNPKKTK-----LLEDAEAAGCKTVGGL-------GMLLWQ 265 (289)
T ss_pred ccCCEEEEeCCCCCCCCCCCCCCCcHHhcCCCCEEEEecCCCCCCH-----HHHHHHHCCCeeeCcH-------HHHHHH
Confidence 9999999997432211 1222 1233444556889987654332 2356788888877654 355555
Q ss_pred Hhhhc
Q 012947 163 NSRQW 167 (452)
Q Consensus 163 ~~~~~ 167 (452)
+...+
T Consensus 266 a~~~f 270 (289)
T PRK12548 266 GAEAY 270 (289)
T ss_pred HHHHH
Confidence 55444
No 264
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.48 E-value=4.9e-07 Score=89.45 Aligned_cols=75 Identities=16% Similarity=0.250 Sum_probs=64.0
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc-c
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT-K 90 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~-d 90 (452)
+|+|||||||+|++++++|.++| ++|...+|+..+..... ..+.++.+|++|.+.+.+.++.. |
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~--------~~~~~~~~d~~~~~~~~~~~~~~~d 66 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAG-------HDVRGLDRLRDGLDPLL--------SGVEFVVLDLTDRDLVDELAKGVPD 66 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCC-------CeEEEEeCCCccccccc--------cccceeeecccchHHHHHHHhcCCC
Confidence 49999999999999999999998 89999999887654322 25688899999998889999888 9
Q ss_pred EEeecCCCCCC
Q 012947 91 LLLNCVGPYRL 101 (452)
Q Consensus 91 vVIn~aGp~~~ 101 (452)
+|||+++....
T Consensus 67 ~vih~aa~~~~ 77 (314)
T COG0451 67 AVIHLAAQSSV 77 (314)
T ss_pred EEEEccccCch
Confidence 99999986643
No 265
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=98.48 E-value=9.2e-07 Score=80.43 Aligned_cols=74 Identities=26% Similarity=0.350 Sum_probs=67.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
|+|-|+||||-+|+.++++..++| ++|+.+.||++|+.+. ..+.+++.|+-|++++.+.+.+.|
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RG-------HeVTAivRn~~K~~~~---------~~~~i~q~Difd~~~~a~~l~g~D 64 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRG-------HEVTAIVRNASKLAAR---------QGVTILQKDIFDLTSLASDLAGHD 64 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCC-------CeeEEEEeChHhcccc---------ccceeecccccChhhhHhhhcCCc
Confidence 589999999999999999999999 8999999999998543 356789999999999999999999
Q ss_pred EEeecCCCCC
Q 012947 91 LLLNCVGPYR 100 (452)
Q Consensus 91 vVIn~aGp~~ 100 (452)
+||+..|...
T Consensus 65 aVIsA~~~~~ 74 (211)
T COG2910 65 AVISAFGAGA 74 (211)
T ss_pred eEEEeccCCC
Confidence 9999998764
No 266
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.47 E-value=7.1e-07 Score=86.60 Aligned_cols=74 Identities=28% Similarity=0.349 Sum_probs=67.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
++|+|+||||++|++++++|.+++ ++|.++.|+.+++..+. ..+++...|+.++.++...+++.+
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~-------~~v~~~~r~~~~~~~~~--------~~v~~~~~d~~~~~~l~~a~~G~~ 65 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARG-------HEVRAAVRNPEAAAALA--------GGVEVVLGDLRDPKSLVAGAKGVD 65 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCC-------CEEEEEEeCHHHHHhhc--------CCcEEEEeccCCHhHHHHHhcccc
Confidence 479999999999999999999998 89999999999987654 368999999999999999999999
Q ss_pred EEeecCCCC
Q 012947 91 LLLNCVGPY 99 (452)
Q Consensus 91 vVIn~aGp~ 99 (452)
.++++.+..
T Consensus 66 ~~~~i~~~~ 74 (275)
T COG0702 66 GVLLISGLL 74 (275)
T ss_pred EEEEEeccc
Confidence 999998744
No 267
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=98.46 E-value=8.2e-07 Score=89.90 Aligned_cols=107 Identities=21% Similarity=0.335 Sum_probs=76.3
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 8 ~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
.+...++|+||+||+|++++++|.+.++ ..++.+++.......-..+..+. ....+..+.+|+.|..++..+++
T Consensus 2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~-----~~~irv~D~~~~~~~~~~e~~~~-~~~~v~~~~~D~~~~~~i~~a~~ 75 (361)
T KOG1430|consen 2 EKKLSVLVTGGSGFLGQHLVQALLENEL-----KLEIRVVDKTPTQSNLPAELTGF-RSGRVTVILGDLLDANSISNAFQ 75 (361)
T ss_pred CcCCEEEEECCccHHHHHHHHHHHhccc-----ccEEEEeccCccccccchhhhcc-cCCceeEEecchhhhhhhhhhcc
Confidence 3457899999999999999999999983 27899999876432111121110 14678999999999999999999
Q ss_pred CccEEeec-CCCCCCC--------------C-HHHHHHHHHhCCc-EEEec
Q 012947 88 QTKLLLNC-VGPYRLH--------------G-DPVAAACVHSGCD-YLDIS 121 (452)
Q Consensus 88 ~~dvVIn~-aGp~~~~--------------~-~~vv~ac~~~g~~-yvDls 121 (452)
++ .|+|| |++.... | .+++++|.+.++. .|.+|
T Consensus 76 ~~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtS 125 (361)
T KOG1430|consen 76 GA-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTS 125 (361)
T ss_pred Cc-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEec
Confidence 99 55555 4443221 2 6788888888875 44433
No 268
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=98.46 E-value=1.3e-06 Score=86.06 Aligned_cols=78 Identities=19% Similarity=0.273 Sum_probs=64.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec----ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR----NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR----~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
..|+||||.||||.+++-+|.+.| +.|.+++. ..+.+..+.+-.. ....+.++.+|+.|.+.|++++
T Consensus 3 ~~VLVtGgaGyiGsht~l~L~~~g-------y~v~~vDNl~n~~~~sl~r~~~l~~--~~~~v~f~~~Dl~D~~~L~kvF 73 (343)
T KOG1371|consen 3 KHVLVTGGAGYIGSHTVLALLKRG-------YGVVIVDNLNNSYLESLKRVRQLLG--EGKSVFFVEGDLNDAEALEKLF 73 (343)
T ss_pred cEEEEecCCcceehHHHHHHHhCC-------CcEEEEecccccchhHHHHHHHhcC--CCCceEEEEeccCCHHHHHHHH
Confidence 579999999999999999999998 78888774 3445555444432 2468999999999999999999
Q ss_pred c--CccEEeecCC
Q 012947 87 S--QTKLLLNCVG 97 (452)
Q Consensus 87 ~--~~dvVIn~aG 97 (452)
+ ..|.|+|.|+
T Consensus 74 ~~~~fd~V~Hfa~ 86 (343)
T KOG1371|consen 74 SEVKFDAVMHFAA 86 (343)
T ss_pred hhcCCceEEeehh
Confidence 8 5799999986
No 269
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=98.46 E-value=3.5e-07 Score=91.47 Aligned_cols=81 Identities=9% Similarity=0.045 Sum_probs=60.1
Q ss_pred CCeEEEEcC--CchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC--------C-C---CCccEEEEe
Q 012947 10 LFDVIILGA--SGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS--------H-S---LSIPILTAD 75 (452)
Q Consensus 10 ~~~ilV~GA--TG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~--------~-~---~~v~~v~~D 75 (452)
...++|||| +.+||+.+++.|++.| .+|++ +|+.++++++..++... . . .....+.+|
T Consensus 9 gk~alITGa~~s~GIG~a~A~~la~~G-------a~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 80 (303)
T PLN02730 9 GKRAFIAGVADDNGYGWAIAKALAAAG-------AEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLD 80 (303)
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHHCC-------CEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecc
Confidence 457999999 8999999999999999 89988 89988888877555310 0 0 113567788
Q ss_pred C--CCH------------------HHHHHHHc-------CccEEeecCCC
Q 012947 76 T--TDP------------------PSLHRLCS-------QTKLLLNCVGP 98 (452)
Q Consensus 76 l--~d~------------------~sl~~~~~-------~~dvVIn~aGp 98 (452)
+ +++ ++++++++ +.|+||||||.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~ 130 (303)
T PLN02730 81 AVFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLAN 130 (303)
T ss_pred eecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 8 333 36666655 47999999974
No 270
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.44 E-value=7.1e-07 Score=84.89 Aligned_cols=72 Identities=21% Similarity=0.147 Sum_probs=58.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCH-HHHHHHHcCc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDP-PSLHRLCSQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~-~sl~~~~~~~ 89 (452)
..++|+||+|++|+.++++|+++| ++|++++|+.... . ..++..+.+|++|+ +.+.+.+.++
T Consensus 6 k~~lVtGas~~iG~~ia~~l~~~G-------~~v~~~~r~~~~~------~----~~~~~~~~~D~~~~~~~~~~~~~~i 68 (235)
T PRK06550 6 KTVLITGAASGIGLAQARAFLAQG-------AQVYGVDKQDKPD------L----SGNFHFLQLDLSDDLEPLFDWVPSV 68 (235)
T ss_pred CEEEEcCCCchHHHHHHHHHHHCC-------CEEEEEeCCcccc------c----CCcEEEEECChHHHHHHHHHhhCCC
Confidence 579999999999999999999998 7999999986432 1 23567889999987 4455555678
Q ss_pred cEEeecCCCC
Q 012947 90 KLLLNCVGPY 99 (452)
Q Consensus 90 dvVIn~aGp~ 99 (452)
|+|||++|..
T Consensus 69 d~lv~~ag~~ 78 (235)
T PRK06550 69 DILCNTAGIL 78 (235)
T ss_pred CEEEECCCCC
Confidence 9999999854
No 271
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=98.41 E-value=1.4e-06 Score=83.67 Aligned_cols=84 Identities=18% Similarity=0.175 Sum_probs=62.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhH--HHHHHHHhCCCCC-CCccEEEEeCCC-HHHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR--VKQALQWASPSHS-LSIPILTADTTD-PPSLHR 84 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~k--l~~l~~~l~~~~~-~~v~~v~~Dl~d-~~sl~~ 84 (452)
....++|+||++++|+.+++.|+++| .+++++.|+.++ ++.+.+... ... ..+....+|+++ .++++.
T Consensus 4 ~~~~ilITGas~GiG~aia~~l~~~G-------~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dvs~~~~~v~~ 75 (251)
T COG1028 4 SGKVALVTGASSGIGRAIARALAREG-------ARVVVAARRSEEEAAEALAAAIK-EAGGGRAAAVAADVSDDEESVEA 75 (251)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCC-------CeEEEEcCCCchhhHHHHHHHHH-hcCCCcEEEEEecCCCCHHHHHH
Confidence 34679999999999999999999888 788888887654 333333321 011 256677799998 888877
Q ss_pred HHc-------CccEEeecCCCCC
Q 012947 85 LCS-------QTKLLLNCVGPYR 100 (452)
Q Consensus 85 ~~~-------~~dvVIn~aGp~~ 100 (452)
+++ +.|++|||||...
T Consensus 76 ~~~~~~~~~g~id~lvnnAg~~~ 98 (251)
T COG1028 76 LVAAAEEEFGRIDILVNNAGIAG 98 (251)
T ss_pred HHHHHHHHcCCCCEEEECCCCCC
Confidence 665 3799999999754
No 272
>PRK07578 short chain dehydrogenase; Provisional
Probab=98.39 E-value=1.1e-06 Score=81.59 Aligned_cols=62 Identities=31% Similarity=0.500 Sum_probs=52.9
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---C
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---Q 88 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~---~ 88 (452)
+++|+||+|++|+.++++|+++ .+|++.+|+.+ .+.+|++|+++++++++ +
T Consensus 2 ~vlItGas~giG~~la~~l~~~--------~~vi~~~r~~~------------------~~~~D~~~~~~~~~~~~~~~~ 55 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR--------HEVITAGRSSG------------------DVQVDITDPASIRALFEKVGK 55 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc--------CcEEEEecCCC------------------ceEecCCChHHHHHHHHhcCC
Confidence 6999999999999999999876 37888888642 25789999999998877 6
Q ss_pred ccEEeecCCCC
Q 012947 89 TKLLLNCVGPY 99 (452)
Q Consensus 89 ~dvVIn~aGp~ 99 (452)
+|+|||++|..
T Consensus 56 id~lv~~ag~~ 66 (199)
T PRK07578 56 VDAVVSAAGKV 66 (199)
T ss_pred CCEEEECCCCC
Confidence 89999999964
No 273
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=98.38 E-value=4.8e-06 Score=81.85 Aligned_cols=138 Identities=16% Similarity=0.082 Sum_probs=102.1
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
...-|+|||+-.+.|+.+|++|.+.| ++|.++.-+++..+.+..+.. .++...+..|++++++++++.+
T Consensus 28 ~~k~VlITGCDSGfG~~LA~~L~~~G-------f~V~Agcl~~~gae~L~~~~~---s~rl~t~~LDVT~~esi~~a~~~ 97 (322)
T KOG1610|consen 28 SDKAVLITGCDSGFGRLLAKKLDKKG-------FRVFAGCLTEEGAESLRGETK---SPRLRTLQLDVTKPESVKEAAQW 97 (322)
T ss_pred CCcEEEEecCCcHHHHHHHHHHHhcC-------CEEEEEeecCchHHHHhhhhc---CCcceeEeeccCCHHHHHHHHHH
Confidence 34569999999999999999999999 899999888888888877663 4678888999999999999877
Q ss_pred --------CccEEeecCCCCCCCC------HHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCc
Q 012947 88 --------QTKLLLNCVGPYRLHG------DPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDS 153 (452)
Q Consensus 88 --------~~dvVIn~aGp~~~~~------~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s 153 (452)
+--.||||||.....| ....+.|++ ||+-|....++.+. .+-.+|+..-+++-|.||--+
T Consensus 98 V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~-----vNllG~irvT~~~l-pLlr~arGRvVnvsS~~GR~~ 171 (322)
T KOG1610|consen 98 VKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLN-----VNLLGTIRVTKAFL-PLLRRARGRVVNVSSVLGRVA 171 (322)
T ss_pred HHHhcccccceeEEeccccccccCccccccHHHHHHHHh-----hhhhhHHHHHHHHH-HHHHhccCeEEEecccccCcc
Confidence 2468999999655444 334445544 66778888888774 444556655555667777655
Q ss_pred chhhHHHHHH
Q 012947 154 IPAELGVMFN 163 (452)
Q Consensus 154 ~P~dl~~~~~ 163 (452)
.| -++.|-+
T Consensus 172 ~p-~~g~Y~~ 180 (322)
T KOG1610|consen 172 LP-ALGPYCV 180 (322)
T ss_pred Cc-ccccchh
Confidence 55 2444433
No 274
>PLN02996 fatty acyl-CoA reductase
Probab=98.37 E-value=3.1e-06 Score=90.24 Aligned_cols=87 Identities=17% Similarity=0.218 Sum_probs=61.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh---HHHHHHHHh-------------CC----CCCCCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT---RVKQALQWA-------------SP----SHSLSI 69 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~---kl~~l~~~l-------------~~----~~~~~v 69 (452)
...|+|||||||+|+.+++.|++.++. ..+|.+..|... ..+.+..++ .. ....++
T Consensus 11 ~k~VlvTGaTGFlG~~ll~~LL~~~~~----v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv 86 (491)
T PLN02996 11 NKTILVTGATGFLAKIFVEKILRVQPN----VKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKV 86 (491)
T ss_pred CCeEEEeCCCcHHHHHHHHHHHhhCCC----CCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCE
Confidence 467999999999999999999987631 147888888653 111211111 00 001468
Q ss_pred cEEEEeCC-------CHHHHHHHHcCccEEeecCCCCC
Q 012947 70 PILTADTT-------DPPSLHRLCSQTKLLLNCVGPYR 100 (452)
Q Consensus 70 ~~v~~Dl~-------d~~sl~~~~~~~dvVIn~aGp~~ 100 (452)
.++.+|++ |.+.++++++++|+|||+|+...
T Consensus 87 ~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~ 124 (491)
T PLN02996 87 TPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTN 124 (491)
T ss_pred EEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccC
Confidence 89999998 55567888899999999998644
No 275
>PLN02778 3,5-epimerase/4-reductase
Probab=98.36 E-value=2.9e-06 Score=84.59 Aligned_cols=58 Identities=14% Similarity=0.199 Sum_probs=43.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
.++|+|+||+||+|++++++|+++| ++|.+..+ |++|.+.+...++
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g-------~~V~~~~~-------------------------~~~~~~~v~~~l~~~ 56 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQG-------IDFHYGSG-------------------------RLENRASLEADIDAV 56 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCC-------CEEEEecC-------------------------ccCCHHHHHHHHHhc
Confidence 4789999999999999999999998 67754322 2334444554444
Q ss_pred CccEEeecCCCC
Q 012947 88 QTKLLLNCVGPY 99 (452)
Q Consensus 88 ~~dvVIn~aGp~ 99 (452)
++|+|||+||..
T Consensus 57 ~~D~ViH~Aa~~ 68 (298)
T PLN02778 57 KPTHVFNAAGVT 68 (298)
T ss_pred CCCEEEECCccc
Confidence 689999999865
No 276
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=98.36 E-value=6.7e-07 Score=85.15 Aligned_cols=76 Identities=25% Similarity=0.397 Sum_probs=58.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc---
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--- 87 (452)
++++|+||+|+||+.++++|++++. ...+.+..|+.... . ...++.++.+|++|.++++++.+
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~-----~~~v~~~~~~~~~~------~---~~~~~~~~~~Dls~~~~~~~~~~~~~ 66 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYP-----DATVHATYRHHKPD------F---QHDNVQWHALDVTDEAEIKQLSEQFT 66 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCC-----CCEEEEEccCCccc------c---ccCceEEEEecCCCHHHHHHHHHhcC
Confidence 4799999999999999999999862 15666666654321 1 12467789999999998877654
Q ss_pred CccEEeecCCCCC
Q 012947 88 QTKLLLNCVGPYR 100 (452)
Q Consensus 88 ~~dvVIn~aGp~~ 100 (452)
+.|+||||+|...
T Consensus 67 ~id~li~~aG~~~ 79 (235)
T PRK09009 67 QLDWLINCVGMLH 79 (235)
T ss_pred CCCEEEECCcccc
Confidence 6899999999754
No 277
>PLN02503 fatty acyl-CoA reductase 2
Probab=98.31 E-value=5.5e-06 Score=89.84 Aligned_cols=88 Identities=11% Similarity=0.178 Sum_probs=62.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhH---HHHHHHHh-------------CCC----CCCC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR---VKQALQWA-------------SPS----HSLS 68 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~k---l~~l~~~l-------------~~~----~~~~ 68 (452)
+..+|+|||||||+|+.+++.|++.++. ..+|.+..|.... .+++.+++ +.. ...+
T Consensus 118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~----v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~K 193 (605)
T PLN02503 118 RGKNFLITGATGFLAKVLIEKILRTNPD----VGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSK 193 (605)
T ss_pred cCCEEEEcCCchHHHHHHHHHHHHhCCC----CcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCcccccccccc
Confidence 3568999999999999999999987641 1488889885422 22222121 100 0246
Q ss_pred ccEEEEeCCCH------HHHHHHHcCccEEeecCCCCC
Q 012947 69 IPILTADTTDP------PSLHRLCSQTKLLLNCVGPYR 100 (452)
Q Consensus 69 v~~v~~Dl~d~------~sl~~~~~~~dvVIn~aGp~~ 100 (452)
+.++.+|++++ +..+.+.+++|+|||+|+...
T Consensus 194 i~~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~ 231 (605)
T PLN02503 194 LVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTT 231 (605)
T ss_pred EEEEEeeCCCcccCCCHHHHHHHHhcCCEEEECccccc
Confidence 88899999986 466777788999999998654
No 278
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=98.31 E-value=9.7e-07 Score=78.91 Aligned_cols=81 Identities=17% Similarity=0.184 Sum_probs=60.8
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHH---HHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQA---LQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l---~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
.++|+||+|++|.+++++|++++. ..+.+.+|+.++.+.. .+++.. ...++.++.+|++++++++++++.
T Consensus 2 ~~li~Ga~~~iG~~~~~~l~~~g~------~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~ 74 (180)
T smart00822 2 TYLITGGLGGLGLELARWLAERGA------RHLVLLSRSGPDAPGAAELLAELEA-LGAEVTVVACDVADRAALAAALAA 74 (180)
T ss_pred EEEEEcCCChHHHHHHHHHHHhhC------CeEEEEeCCCCCCccHHHHHHHHHh-cCCeEEEEECCCCCHHHHHHHHHH
Confidence 589999999999999999998872 3688889976543322 122211 134667889999999988887664
Q ss_pred -------ccEEeecCCCC
Q 012947 89 -------TKLLLNCVGPY 99 (452)
Q Consensus 89 -------~dvVIn~aGp~ 99 (452)
.|.|||++|..
T Consensus 75 ~~~~~~~id~li~~ag~~ 92 (180)
T smart00822 75 IPARLGPLRGVIHAAGVL 92 (180)
T ss_pred HHHHcCCeeEEEEccccC
Confidence 59999999864
No 279
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=98.31 E-value=1.6e-06 Score=84.88 Aligned_cols=86 Identities=21% Similarity=0.301 Sum_probs=67.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--C
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--Q 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--~ 88 (452)
|+|+|+|++|.+|+.+++.|. .+ .+|...+|.. +|++|++.+.++++ +
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~-------~~v~a~~~~~----------------------~Ditd~~~v~~~i~~~~ 50 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GE-------FEVIATDRAE----------------------LDITDPDAVLEVIRETR 50 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CC-------ceEEeccCcc----------------------ccccChHHHHHHHHhhC
Confidence 459999999999999999997 32 6777776633 58999999999998 4
Q ss_pred ccEEeecCCCCCCC----------------CHHHHHHHHHhCCcEEEecCcHHH
Q 012947 89 TKLLLNCVGPYRLH----------------GDPVAAACVHSGCDYLDISGEPEF 126 (452)
Q Consensus 89 ~dvVIn~aGp~~~~----------------~~~vv~ac~~~g~~yvDlsge~~~ 126 (452)
.|+|||||...... ..+++++|.+.|..+|++|.+..|
T Consensus 51 PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiSTDyVF 104 (281)
T COG1091 51 PDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVHISTDYVF 104 (281)
T ss_pred CCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEEeecceEe
Confidence 69999999743321 167888888888888888865554
No 280
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=98.30 E-value=1.9e-06 Score=84.44 Aligned_cols=69 Identities=14% Similarity=0.138 Sum_probs=51.2
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCccEE
Q 012947 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKLL 92 (452)
Q Consensus 13 ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~dvV 92 (452)
|+|+|||||+|++++++|++.+ ++|.+..|+.++...... ....|+.+ +.+.+.+.++|+|
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~-----------~~~~~~~~-~~~~~~~~~~D~V 61 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDG-------HEVTILTRSPPAGANTKW-----------EGYKPWAP-LAESEALEGADAV 61 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcC-------CEEEEEeCCCCCCCcccc-----------eeeecccc-cchhhhcCCCCEE
Confidence 6899999999999999999988 899999998876532110 01123322 4456677899999
Q ss_pred eecCCCCC
Q 012947 93 LNCVGPYR 100 (452)
Q Consensus 93 In~aGp~~ 100 (452)
|||||...
T Consensus 62 vh~a~~~~ 69 (292)
T TIGR01777 62 INLAGEPI 69 (292)
T ss_pred EECCCCCc
Confidence 99998643
No 281
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=98.30 E-value=7.6e-07 Score=85.43 Aligned_cols=76 Identities=21% Similarity=0.286 Sum_probs=59.4
Q ss_pred cCC--chHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-------
Q 012947 17 GAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS------- 87 (452)
Q Consensus 17 GAT--G~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~------- 87 (452)
|++ +.||+.+++.|+++| ++|++.+|+.+++++..+++.. .....++.+|++|+++++++++
T Consensus 1 g~~~s~GiG~aia~~l~~~G-------a~V~~~~~~~~~~~~~~~~l~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 71 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEG-------ANVILTDRNEEKLADALEELAK--EYGAEVIQCDLSDEESVEALFDEAVERFG 71 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTT-------EEEEEEESSHHHHHHHHHHHHH--HTTSEEEESCTTSHHHHHHHHHHHHHHHC
T ss_pred CCCCCCChHHHHHHHHHHCC-------CEEEEEeCChHHHHHHHHHHHH--HcCCceEeecCcchHHHHHHHHHHHhhcC
Confidence 667 999999999999999 8999999999985444443321 1123479999999999988754
Q ss_pred -CccEEeecCCCCCC
Q 012947 88 -QTKLLLNCVGPYRL 101 (452)
Q Consensus 88 -~~dvVIn~aGp~~~ 101 (452)
+.|+||||+|....
T Consensus 72 g~iD~lV~~a~~~~~ 86 (241)
T PF13561_consen 72 GRIDILVNNAGISPP 86 (241)
T ss_dssp SSESEEEEEEESCTG
T ss_pred CCeEEEEeccccccc
Confidence 57999999986543
No 282
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=98.28 E-value=4e-06 Score=81.87 Aligned_cols=163 Identities=15% Similarity=0.060 Sum_probs=94.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEE-EEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v-~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
++|.|+|++|.+|+.+++.+.+... .++ .+++++.++.... . . .++...++++++++++
T Consensus 2 mkV~IiG~~G~mG~~i~~~l~~~~~------~elvav~d~~~~~~~~~-~--------~-----~~i~~~~dl~~ll~~~ 61 (257)
T PRK00048 2 IKVAVAGASGRMGRELIEAVEAAED------LELVAAVDRPGSPLVGQ-G--------A-----LGVAITDDLEAVLADA 61 (257)
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCC------CEEEEEEecCCcccccc-C--------C-----CCccccCCHHHhccCC
Confidence 6899999999999999998876531 454 4567776654322 1 1 1222234466677789
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhcCC
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWIP 169 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~~~ 169 (452)
|+||+++.|... ..+++.|+++|+|.|-- ...|..+..+.+.+.+++.++.+.+...+...+....+-.+++.+..
T Consensus 62 DvVid~t~p~~~--~~~~~~al~~G~~vvig--ttG~s~~~~~~l~~aa~~~~v~~s~n~s~g~~~~~~l~~~aa~~l~~ 137 (257)
T PRK00048 62 DVLIDFTTPEAT--LENLEFALEHGKPLVIG--TTGFTEEQLAELEEAAKKIPVVIAPNFSIGVNLLMKLAEKAAKYLGD 137 (257)
T ss_pred CEEEECCCHHHH--HHHHHHHHHcCCCEEEE--CCCCCHHHHHHHHHHhcCCCEEEECcchHHHHHHHHHHHHHHHhcCC
Confidence 999999966443 68999999999997732 33334444455566444445555554444333322233344455532
Q ss_pred CCCcceEEEEEEeccCCc--cccccccHHHHHHhHhc
Q 012947 170 PAVPNQIEAYVSLESDKR--IVGNFGTYESAVLGVAN 204 (452)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~--~~g~~GT~~S~~~~~~~ 204 (452)
.+.+.+|.-. .-+. .| ||.-.+...+..
T Consensus 138 -~d~ei~E~HH---~~K~DaPS---GTA~~l~~~i~~ 167 (257)
T PRK00048 138 -YDIEIIEAHH---RHKVDAPS---GTALKLAEAIAE 167 (257)
T ss_pred -CCEEEEEccC---CCCCCCCC---HHHHHHHHHHHH
Confidence 3333333322 2222 22 777765555543
No 283
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=98.27 E-value=2.4e-06 Score=78.89 Aligned_cols=82 Identities=20% Similarity=0.255 Sum_probs=57.5
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh---hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP---TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~---~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
.++|+|++|.+|+.++++|++++. .++++.+|+. .+.++..+++.. ...++.++.+|++|++++.+++++
T Consensus 2 tylitGG~gglg~~la~~La~~~~------~~~il~~r~~~~~~~~~~~i~~l~~-~g~~v~~~~~Dv~d~~~v~~~~~~ 74 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGA------RRLILLGRSGAPSAEAEAAIRELES-AGARVEYVQCDVTDPEAVAAALAQ 74 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-------SEEEEEESSGGGSTTHHHHHHHHHH-TT-EEEEEE--TTSHHHHHHHHHT
T ss_pred EEEEECCccHHHHHHHHHHHHcCC------CEEEEeccCCCccHHHHHHHHHHHh-CCCceeeeccCccCHHHHHHHHHH
Confidence 479999999999999999999983 6899999992 223334444431 245788999999999999999874
Q ss_pred -------ccEEeecCCCCC
Q 012947 89 -------TKLLLNCVGPYR 100 (452)
Q Consensus 89 -------~dvVIn~aGp~~ 100 (452)
++.|||++|...
T Consensus 75 ~~~~~~~i~gVih~ag~~~ 93 (181)
T PF08659_consen 75 LRQRFGPIDGVIHAAGVLA 93 (181)
T ss_dssp SHTTSS-EEEEEE------
T ss_pred HHhccCCcceeeeeeeeec
Confidence 478999998643
No 284
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=98.25 E-value=2.8e-06 Score=82.73 Aligned_cols=96 Identities=11% Similarity=0.214 Sum_probs=77.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--C
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--Q 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--~ 88 (452)
++|+|+||||. |+.+++.|.+.+ ++|.+..|+....+.+.+ .....+..+..|.+++.+.++ +
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g-------~~v~~s~~t~~~~~~~~~-------~g~~~v~~g~l~~~~l~~~l~~~~ 65 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQG-------IEILVTVTTSEGKHLYPI-------HQALTVHTGALDPQELREFLKRHS 65 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCC-------CeEEEEEccCCccccccc-------cCCceEEECCCCHHHHHHHHHhcC
Confidence 47999999999 999999999988 799999998876543322 122345566778888988887 4
Q ss_pred ccEEeecCCCCCC-CCHHHHHHHHHhCCcEEEec
Q 012947 89 TKLLLNCVGPYRL-HGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 89 ~dvVIn~aGp~~~-~~~~vv~ac~~~g~~yvDls 121 (452)
+|+||+++.||.. -..++.++|.+.|+.|+.+.
T Consensus 66 i~~VIDAtHPfA~~is~~a~~a~~~~~ipylR~e 99 (256)
T TIGR00715 66 IDILVDATHPFAAQITTNATAVCKELGIPYVRFE 99 (256)
T ss_pred CCEEEEcCCHHHHHHHHHHHHHHHHhCCcEEEEE
Confidence 8999999999874 35789999999999999884
No 285
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=98.23 E-value=5.4e-06 Score=74.00 Aligned_cols=119 Identities=17% Similarity=0.149 Sum_probs=83.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
+..+++|+|+ |.+|+.+++.|.+.+. .++.+.+|+.++.+++.+++.. . .+..+..+. .+++++
T Consensus 18 ~~~~i~iiG~-G~~g~~~a~~l~~~g~------~~v~v~~r~~~~~~~~~~~~~~----~--~~~~~~~~~---~~~~~~ 81 (155)
T cd01065 18 KGKKVLILGA-GGAARAVAYALAELGA------AKIVIVNRTLEKAKALAERFGE----L--GIAIAYLDL---EELLAE 81 (155)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCC------CEEEEEcCCHHHHHHHHHHHhh----c--ccceeecch---hhcccc
Confidence 3468999998 8999999999998751 6899999999998888776631 1 122334343 344789
Q ss_pred ccEEeecCCCCCC--CCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcC
Q 012947 89 TKLLLNCVGPYRL--HGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSA 148 (452)
Q Consensus 89 ~dvVIn~aGp~~~--~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~ 148 (452)
+|+||+|+++... ....+...+++.+...+|++..+... .+.+.+++.|+.++++
T Consensus 82 ~Dvvi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~~~~~-----~l~~~~~~~g~~~v~g 138 (155)
T cd01065 82 ADLIINTTPVGMKPGDELPLPPSLLKPGGVVYDVVYNPLET-----PLLKEARALGAKTIDG 138 (155)
T ss_pred CCEEEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcCCCCC-----HHHHHHHHCCCceeCC
Confidence 9999999976543 22333455677888899998765432 3345667778776654
No 286
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=98.23 E-value=2.6e-06 Score=84.24 Aligned_cols=58 Identities=14% Similarity=0.188 Sum_probs=46.7
Q ss_pred EEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--CccE
Q 012947 14 IILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--QTKL 91 (452)
Q Consensus 14 lV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--~~dv 91 (452)
+|+|||||+|+.++++|++.+ .+++++.+. ..+|+.|.++++++++ ++|+
T Consensus 1 lItGa~GfiG~~l~~~L~~~g-------~~v~~~~~~---------------------~~~Dl~~~~~l~~~~~~~~~d~ 52 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALG-------FTNLVLRTH---------------------KELDLTRQADVEAFFAKEKPTY 52 (306)
T ss_pred CcccCCCcccHHHHHHHHhCC-------CcEEEeecc---------------------ccCCCCCHHHHHHHHhccCCCE
Confidence 589999999999999999987 555544321 1368999999999887 4799
Q ss_pred EeecCCCC
Q 012947 92 LLNCVGPY 99 (452)
Q Consensus 92 VIn~aGp~ 99 (452)
|||||++.
T Consensus 53 Vih~A~~~ 60 (306)
T PLN02725 53 VILAAAKV 60 (306)
T ss_pred EEEeeeee
Confidence 99999864
No 287
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.20 E-value=5.8e-06 Score=83.45 Aligned_cols=138 Identities=14% Similarity=0.054 Sum_probs=81.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~--~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
++++|+|+||+|++|+.++..|+..+-.+.....++++.+|++ ++++....++. +.. .....|+....++.+.+
T Consensus 1 ~~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~---d~~-~~~~~~~~~~~~~~~~l 76 (325)
T cd01336 1 EPIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQ---DCA-FPLLKSVVATTDPEEAF 76 (325)
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehh---hcc-ccccCCceecCCHHHHh
Confidence 3689999999999999999999986521000114899999965 33433222221 000 01122444456678889
Q ss_pred cCccEEeecCCCCCCCCH---HHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHH
Q 012947 87 SQTKLLLNCVGPYRLHGD---PVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFN 163 (452)
Q Consensus 87 ~~~dvVIn~aGp~~~~~~---~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~ 163 (452)
+++|+|||+||.....++ .+++.. ...++.+.....+.+...++.|+.+ -|-|+.++.+
T Consensus 77 ~~aDiVI~tAG~~~~~~~~R~~l~~~N-------------~~i~~~i~~~i~~~~~~~~iiivvs-----NPvD~~t~~~ 138 (325)
T cd01336 77 KDVDVAILVGAMPRKEGMERKDLLKAN-------------VKIFKEQGEALDKYAKKNVKVLVVG-----NPANTNALIL 138 (325)
T ss_pred CCCCEEEEeCCcCCCCCCCHHHHHHHH-------------HHHHHHHHHHHHHhCCCCeEEEEec-----CcHHHHHHHH
Confidence 999999999997544331 222211 2233444444444333244444433 4889999998
Q ss_pred hhhcC
Q 012947 164 SRQWI 168 (452)
Q Consensus 164 ~~~~~ 168 (452)
.+...
T Consensus 139 ~k~~~ 143 (325)
T cd01336 139 LKYAP 143 (325)
T ss_pred HHHcC
Confidence 88863
No 288
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.11 E-value=2.4e-05 Score=70.64 Aligned_cols=107 Identities=18% Similarity=0.121 Sum_probs=81.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~-- 88 (452)
..|+++||.-+||+.++..|++.| .+|+...|+++.+..+.++. +..+..+.+|+++.+.+.+.+..
T Consensus 8 ~~vlvTgagaGIG~~~v~~La~aG-------A~ViAvaR~~a~L~sLV~e~----p~~I~Pi~~Dls~wea~~~~l~~v~ 76 (245)
T KOG1207|consen 8 VIVLVTGAGAGIGKEIVLSLAKAG-------AQVIAVARNEANLLSLVKET----PSLIIPIVGDLSAWEALFKLLVPVF 76 (245)
T ss_pred eEEEeecccccccHHHHHHHHhcC-------CEEEEEecCHHHHHHHHhhC----CcceeeeEecccHHHHHHHhhcccC
Confidence 569999999999999999999999 89999999999999998874 34588899999999988888764
Q ss_pred -ccEEeecCCCCCCCCHHHHHHHHHh--CCcEEEecCcHHHHHHH
Q 012947 89 -TKLLLNCVGPYRLHGDPVAAACVHS--GCDYLDISGEPEFMERM 130 (452)
Q Consensus 89 -~dvVIn~aGp~~~~~~~vv~ac~~~--g~~yvDlsge~~~~~~~ 130 (452)
.|.++|+||.-..+ ++.+...+. ..--|++-+.....+..
T Consensus 77 pidgLVNNAgvA~~~--pf~eiT~q~fDr~F~VNvravi~v~Q~v 119 (245)
T KOG1207|consen 77 PIDGLVNNAGVATNH--PFGEITQQSFDRTFAVNVRAVILVAQLV 119 (245)
T ss_pred chhhhhccchhhhcc--hHHHHhHHhhcceeeeeeeeeeeHHHHH
Confidence 69999999965433 333333332 22345555555544443
No 289
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=98.09 E-value=1.2e-05 Score=77.84 Aligned_cols=80 Identities=16% Similarity=0.249 Sum_probs=59.8
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 8 ~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
....+|+|+||.||||+++|+.|..++ ..|++++---.+-+..++-+- ...+.+++.-|+..+ ++.
T Consensus 25 ~~~lrI~itGgaGFIgSHLvdkLm~eg-------h~VIa~Dn~ftg~k~n~~~~~--~~~~fel~~hdv~~p-----l~~ 90 (350)
T KOG1429|consen 25 SQNLRILITGGAGFIGSHLVDKLMTEG-------HEVIALDNYFTGRKENLEHWI--GHPNFELIRHDVVEP-----LLK 90 (350)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHhcC-------CeEEEEecccccchhhcchhc--cCcceeEEEeechhH-----HHH
Confidence 346899999999999999999999998 788888875444333333221 245678888887654 778
Q ss_pred CccEEeecCCCCCC
Q 012947 88 QTKLLLNCVGPYRL 101 (452)
Q Consensus 88 ~~dvVIn~aGp~~~ 101 (452)
.+|-|+|.|.|...
T Consensus 91 evD~IyhLAapasp 104 (350)
T KOG1429|consen 91 EVDQIYHLAAPASP 104 (350)
T ss_pred HhhhhhhhccCCCC
Confidence 88999999877543
No 290
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.07 E-value=8.7e-06 Score=79.99 Aligned_cols=83 Identities=16% Similarity=0.178 Sum_probs=70.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHcC-
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCSQ- 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~-~~~~~v~~v~~Dl~d~~sl~~~~~~- 88 (452)
..|+|+|++..+|..++..+..+| .+|.+..|+.+|++++.++++. ....++.+..+|+.|-+++..++++
T Consensus 34 ~hi~itggS~glgl~la~e~~~~g-------a~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l 106 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREG-------ADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEEL 106 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHcc-------CceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhh
Confidence 479999999999999999999999 7999999999999999988864 1112355888999999999988875
Q ss_pred ------ccEEeecCCCCC
Q 012947 89 ------TKLLLNCVGPYR 100 (452)
Q Consensus 89 ------~dvVIn~aGp~~ 100 (452)
.|.+|||||...
T Consensus 107 ~~~~~~~d~l~~cAG~~v 124 (331)
T KOG1210|consen 107 RDLEGPIDNLFCCAGVAV 124 (331)
T ss_pred hhccCCcceEEEecCccc
Confidence 489999999643
No 291
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.98 E-value=4.5e-05 Score=76.97 Aligned_cols=81 Identities=17% Similarity=0.343 Sum_probs=61.1
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh------HHHHHHHHhCC---CCCCCccEEEEeCC-----
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT------RVKQALQWASP---SHSLSIPILTADTT----- 77 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~------kl~~l~~~l~~---~~~~~v~~v~~Dl~----- 77 (452)
++++||||||+|++++++|+..-+ .+|.+..|-.+ ++++....... ....++.++.+|+.
T Consensus 2 ~vlLTGATGFLG~yLl~eLL~~~~------~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lG 75 (382)
T COG3320 2 NVLLTGATGFLGAYLLLELLDRSD------AKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLG 75 (382)
T ss_pred eEEEecCchHhHHHHHHHHHhcCC------CcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCC
Confidence 689999999999999999998763 68999988433 33333331110 12468899999998
Q ss_pred -CHHHHHHHHcCccEEeecCCC
Q 012947 78 -DPPSLHRLCSQTKLLLNCVGP 98 (452)
Q Consensus 78 -d~~sl~~~~~~~dvVIn~aGp 98 (452)
+....+++.+.+|.|||++.-
T Consensus 76 L~~~~~~~La~~vD~I~H~gA~ 97 (382)
T COG3320 76 LSERTWQELAENVDLIIHNAAL 97 (382)
T ss_pred CCHHHHHHHhhhcceEEecchh
Confidence 457788999999999999863
No 292
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=97.98 E-value=1.8e-05 Score=68.13 Aligned_cols=99 Identities=22% Similarity=0.330 Sum_probs=63.5
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEE-EEEecChhHHHHHHHHhCCCCCCCc-cEEEEeCCCHHHHHHHHcCc
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSI-PILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v-~iagR~~~kl~~l~~~l~~~~~~~v-~~v~~Dl~d~~sl~~~~~~~ 89 (452)
+|.|+||||++|+.+++.|.++.+ +++ .+.+|+.+.-+.+..... ..... ....-| .+.+.+ .++
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~------~e~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~-~~~~~~----~~~ 67 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPD------FELVALVSSSRSAGKPLSEVFP--HPKGFEDLSVED-ADPEEL----SDV 67 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTST------EEEEEEEESTTTTTSBHHHTTG--GGTTTEEEBEEE-TSGHHH----TTE
T ss_pred CEEEECCCCHHHHHHHHHHhcCCC------ccEEEeeeeccccCCeeehhcc--ccccccceeEee-cchhHh----hcC
Confidence 589999999999999999999653 664 445555523322222211 00112 222223 343433 889
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHH
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPE 125 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~ 125 (452)
|+||.|.+.. ....++...++.|+..||+++...
T Consensus 68 Dvvf~a~~~~--~~~~~~~~~~~~g~~ViD~s~~~R 101 (121)
T PF01118_consen 68 DVVFLALPHG--ASKELAPKLLKAGIKVIDLSGDFR 101 (121)
T ss_dssp SEEEE-SCHH--HHHHHHHHHHHTTSEEEESSSTTT
T ss_pred CEEEecCchh--HHHHHHHHHhhCCcEEEeCCHHHh
Confidence 9999998532 236788888999999999998753
No 293
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=97.97 E-value=3.3e-05 Score=85.50 Aligned_cols=59 Identities=17% Similarity=0.193 Sum_probs=45.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
..++|+||||+||+|++++++|.+++ ++|.+. ..|++|.+.+.+.++
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~~~g-------~~v~~~-------------------------~~~l~d~~~v~~~i~~ 426 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCEKQG-------IAYEYG-------------------------KGRLEDRSSLLADIRN 426 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHHhCC-------CeEEee-------------------------ccccccHHHHHHHHHh
Confidence 45789999999999999999999887 565211 124667777877776
Q ss_pred -CccEEeecCCCC
Q 012947 88 -QTKLLLNCVGPY 99 (452)
Q Consensus 88 -~~dvVIn~aGp~ 99 (452)
++|+|||||+..
T Consensus 427 ~~pd~Vih~Aa~~ 439 (668)
T PLN02260 427 VKPTHVFNAAGVT 439 (668)
T ss_pred hCCCEEEECCccc
Confidence 689999999853
No 294
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.97 E-value=2.1e-05 Score=70.82 Aligned_cols=80 Identities=18% Similarity=0.154 Sum_probs=71.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
+..-.+|+|+.+.+|+..++.|+++| ..+++++-..+|-++..++++ .++.+..+|+++++++..++.
T Consensus 8 kglvalvtggasglg~ataerlakqg-------asv~lldlp~skg~~vakelg----~~~vf~padvtsekdv~aala~ 76 (260)
T KOG1199|consen 8 KGLVALVTGGASGLGKATAERLAKQG-------ASVALLDLPQSKGADVAKELG----GKVVFTPADVTSEKDVRAALAK 76 (260)
T ss_pred cCeeEEeecCcccccHHHHHHHHhcC-------ceEEEEeCCcccchHHHHHhC----CceEEeccccCcHHHHHHHHHH
Confidence 45668999999999999999999999 799999999999889999885 688899999999999988876
Q ss_pred ------CccEEeecCCCC
Q 012947 88 ------QTKLLLNCVGPY 99 (452)
Q Consensus 88 ------~~dvVIn~aGp~ 99 (452)
+.|+.+||+|.-
T Consensus 77 ak~kfgrld~~vncagia 94 (260)
T KOG1199|consen 77 AKAKFGRLDALVNCAGIA 94 (260)
T ss_pred HHhhccceeeeeecccee
Confidence 569999999963
No 295
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=97.96 E-value=1.5e-05 Score=79.03 Aligned_cols=134 Identities=20% Similarity=0.165 Sum_probs=86.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
+..+++|+|+ |++|++++..|+..+- .++.+.+|+.+|.+++.+++... ...+.+ ... +++.+.+.+
T Consensus 126 ~~k~vlIlGa-GGaaraia~aL~~~G~------~~I~I~nR~~~ka~~la~~l~~~-~~~~~~--~~~---~~~~~~~~~ 192 (284)
T PRK12549 126 SLERVVQLGA-GGAGAAVAHALLTLGV------ERLTIFDVDPARAAALADELNAR-FPAARA--TAG---SDLAAALAA 192 (284)
T ss_pred cCCEEEEECC-cHHHHHHHHHHHHcCC------CEEEEECCCHHHHHHHHHHHHhh-CCCeEE--Eec---cchHhhhCC
Confidence 3468999998 7799999999999882 48999999999999998877420 111122 222 234556788
Q ss_pred ccEEeec--CCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhh
Q 012947 89 TKLLLNC--VGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQ 166 (452)
Q Consensus 89 ~dvVIn~--aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~ 166 (452)
+|+|||| +|.......++-...+..+.-.+|+...+.-+. +-+.|++.|..++++. +|..+.+...
T Consensus 193 aDiVInaTp~Gm~~~~~~~~~~~~l~~~~~v~DivY~P~~T~-----ll~~A~~~G~~~~~G~-------~ML~~Qa~~~ 260 (284)
T PRK12549 193 ADGLVHATPTGMAKHPGLPLPAELLRPGLWVADIVYFPLETE-----LLRAARALGCRTLDGG-------GMAVFQAVDA 260 (284)
T ss_pred CCEEEECCcCCCCCCCCCCCCHHHcCCCcEEEEeeeCCCCCH-----HHHHHHHCCCeEecCH-------HHHHHHHHHH
Confidence 9999999 553322112332333444556788887554322 2356788898887653 4556555555
Q ss_pred c
Q 012947 167 W 167 (452)
Q Consensus 167 ~ 167 (452)
+
T Consensus 261 f 261 (284)
T PRK12549 261 F 261 (284)
T ss_pred H
Confidence 4
No 296
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=97.95 E-value=8.9e-06 Score=78.65 Aligned_cols=65 Identities=18% Similarity=0.290 Sum_probs=49.3
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-CccE
Q 012947 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-QTKL 91 (452)
Q Consensus 13 ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-~~dv 91 (452)
|+|+||||+||++++..|.+.+ ++|.+..|+..+.+.... ..+. .-+.+..... ++|+
T Consensus 1 IliTGgTGlIG~~L~~~L~~~g-------h~v~iltR~~~~~~~~~~-------~~v~-------~~~~~~~~~~~~~Da 59 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGG-------HQVTILTRRPPKASQNLH-------PNVT-------LWEGLADALTLGIDA 59 (297)
T ss_pred CeEeccccchhHHHHHHHHhCC-------CeEEEEEcCCcchhhhcC-------cccc-------ccchhhhcccCCCCE
Confidence 6899999999999999999998 799999999988754321 1111 1233444444 7999
Q ss_pred EeecCCC
Q 012947 92 LLNCVGP 98 (452)
Q Consensus 92 VIn~aGp 98 (452)
|||.||-
T Consensus 60 vINLAG~ 66 (297)
T COG1090 60 VINLAGE 66 (297)
T ss_pred EEECCCC
Confidence 9999994
No 297
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.93 E-value=5.4e-05 Score=66.58 Aligned_cols=75 Identities=17% Similarity=0.247 Sum_probs=59.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
+..+++|+|| |.+|+.++.+|...+. -++.+++|+.++++++.+.+. ...+-..+++ ++.+.+.+
T Consensus 11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~------~~i~i~nRt~~ra~~l~~~~~-----~~~~~~~~~~---~~~~~~~~ 75 (135)
T PF01488_consen 11 KGKRVLVIGA-GGAARAVAAALAALGA------KEITIVNRTPERAEALAEEFG-----GVNIEAIPLE---DLEEALQE 75 (135)
T ss_dssp TTSEEEEESS-SHHHHHHHHHHHHTTS------SEEEEEESSHHHHHHHHHHHT-----GCSEEEEEGG---GHCHHHHT
T ss_pred CCCEEEEECC-HHHHHHHHHHHHHcCC------CEEEEEECCHHHHHHHHHHcC-----ccccceeeHH---HHHHHHhh
Confidence 4578999998 7899999999999983 469999999999999999873 2233444443 45678889
Q ss_pred ccEEeecCCC
Q 012947 89 TKLLLNCVGP 98 (452)
Q Consensus 89 ~dvVIn~aGp 98 (452)
+|+||||.+.
T Consensus 76 ~DivI~aT~~ 85 (135)
T PF01488_consen 76 ADIVINATPS 85 (135)
T ss_dssp ESEEEE-SST
T ss_pred CCeEEEecCC
Confidence 9999999753
No 298
>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]
Probab=97.92 E-value=4.4e-05 Score=72.82 Aligned_cols=99 Identities=16% Similarity=0.125 Sum_probs=78.2
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC--C-CCCCccEEEEeCCCHHHHHHHHc-
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--S-HSLSIPILTADTTDPPSLHRLCS- 87 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~--~-~~~~v~~v~~Dl~d~~sl~~~~~- 87 (452)
-++|+|+++++|-.+|.+|++..+++ ..+++.++.|+.+|.+++...+.. + ...+++++.+|++|-.++.++.+
T Consensus 5 valITGanSglGl~i~~RLl~~~De~--~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d 82 (341)
T KOG1478|consen 5 VALITGANSGLGLAICKRLLAEDDEN--VRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD 82 (341)
T ss_pred EEEEecCCCcccHHHHHHHHhccCCc--eeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence 48999999999999999999986433 237889999999999998887754 1 12467899999999988877765
Q ss_pred ------CccEEeecCCCCCCCCHHHHHHHHH
Q 012947 88 ------QTKLLLNCVGPYRLHGDPVAAACVH 112 (452)
Q Consensus 88 ------~~dvVIn~aGp~~~~~~~vv~ac~~ 112 (452)
+.|.|.-+||.....+.+...+...
T Consensus 83 i~~rf~~ld~iylNAg~~~~~gi~w~~avf~ 113 (341)
T KOG1478|consen 83 IKQRFQRLDYIYLNAGIMPNPGINWKAAVFG 113 (341)
T ss_pred HHHHhhhccEEEEccccCCCCcccHHHHHHH
Confidence 5799999999877766555555443
No 299
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=97.89 E-value=4.4e-05 Score=75.44 Aligned_cols=130 Identities=16% Similarity=0.140 Sum_probs=87.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+++|+|+ |.+|+.++..|...+. .+|.+++|+.++++++.+++.. ...+. .+. ++.+.+.++
T Consensus 123 ~k~vlVlGa-Gg~a~ai~~aL~~~g~------~~V~v~~R~~~~a~~l~~~~~~--~~~~~---~~~----~~~~~~~~~ 186 (278)
T PRK00258 123 GKRILILGA-GGAARAVILPLLDLGV------AEITIVNRTVERAEELAKLFGA--LGKAE---LDL----ELQEELADF 186 (278)
T ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCC------CEEEEEeCCHHHHHHHHHHhhh--cccee---ecc----cchhccccC
Confidence 457999997 9999999999998873 5899999999999988887641 11111 121 234566789
Q ss_pred cEEeecCCCCCCC---CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhh
Q 012947 90 KLLLNCVGPYRLH---GDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQ 166 (452)
Q Consensus 90 dvVIn~aGp~~~~---~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~ 166 (452)
|+|||+....... ..++...++..+...+|+...+.-+ .+-+.|++.|+.++++. +|..+.+...
T Consensus 187 DivInaTp~g~~~~~~~~~~~~~~l~~~~~v~DivY~P~~T-----~ll~~A~~~G~~~~~G~-------~Ml~~Qa~~~ 254 (278)
T PRK00258 187 DLIINATSAGMSGELPLPPLPLSLLRPGTIVYDMIYGPLPT-----PFLAWAKAQGARTIDGL-------GMLVHQAAEA 254 (278)
T ss_pred CEEEECCcCCCCCCCCCCCCCHHHcCCCCEEEEeecCCCCC-----HHHHHHHHCcCeecCCH-------HHHHHHHHHH
Confidence 9999997432211 1234445666777899998755432 23466888898877553 4566555555
Q ss_pred c
Q 012947 167 W 167 (452)
Q Consensus 167 ~ 167 (452)
+
T Consensus 255 f 255 (278)
T PRK00258 255 F 255 (278)
T ss_pred H
Confidence 4
No 300
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=97.85 E-value=1.7e-05 Score=81.66 Aligned_cols=101 Identities=17% Similarity=0.165 Sum_probs=66.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH-HHc
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHR-LCS 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~-~~~ 87 (452)
+.++|.|+||||++|+.+++.|.++.. .++..+.++.++.+.+.+.. ..+...|+.+.++++. .++
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~hP~------~el~~l~s~~saG~~i~~~~-------~~l~~~~~~~~~~~~~~~~~ 103 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANHPD------FEITVMTADRKAGQSFGSVF-------PHLITQDLPNLVAVKDADFS 103 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhCCC------CeEEEEEChhhcCCCchhhC-------ccccCccccceecCCHHHhc
Confidence 567999999999999999999999842 78888887655433222211 1111123322222222 247
Q ss_pred CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHH
Q 012947 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPE 125 (452)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~ 125 (452)
++|+|+.+.+.- ....++.+. +.|+..||+++...
T Consensus 104 ~~DvVf~Alp~~--~s~~i~~~~-~~g~~VIDlSs~fR 138 (381)
T PLN02968 104 DVDAVFCCLPHG--TTQEIIKAL-PKDLKIVDLSADFR 138 (381)
T ss_pred CCCEEEEcCCHH--HHHHHHHHH-hCCCEEEEcCchhc
Confidence 899999988532 235667664 67889999998653
No 301
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=97.84 E-value=3.9e-05 Score=94.77 Aligned_cols=84 Identities=20% Similarity=0.133 Sum_probs=62.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh--------------h-----------------------
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--------------T----------------------- 52 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~--------------~----------------------- 52 (452)
...+||+||+++||..++++|++++. .++++++|+. .
T Consensus 1997 g~vvLVTGGarGIG~aiA~~LA~~~g------a~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~ 2070 (2582)
T TIGR02813 1997 DDVFLVTGGAKGVTFECALELAKQCQ------AHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVD 2070 (2582)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHhcC------CEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhh
Confidence 35799999999999999999999852 7999999982 0
Q ss_pred ----------HHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc------CccEEeecCCCCC
Q 012947 53 ----------RVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS------QTKLLLNCVGPYR 100 (452)
Q Consensus 53 ----------kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~------~~dvVIn~aGp~~ 100 (452)
.+++.++++.. ...++.++.+|++|.++++++++ +.|+|||+||...
T Consensus 2071 ~~~~~~~~~~ei~~~la~l~~-~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~ 2133 (2582)
T TIGR02813 2071 ALVRPVLSSLEIAQALAAFKA-AGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLA 2133 (2582)
T ss_pred hcccccchhHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCC
Confidence 11111222211 23467788999999999988876 4799999999754
No 302
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=97.83 E-value=9e-05 Score=73.39 Aligned_cols=124 Identities=15% Similarity=0.115 Sum_probs=79.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+++|+|| |+.+++++-.|++.+. .++.++.|+.+|.+++.+.+... .....+... +...+.....++
T Consensus 127 ~k~vlilGa-GGaarAi~~aL~~~g~------~~i~i~nR~~~ka~~La~~~~~~-~~~~~~~~~---~~~~~~~~~~~~ 195 (283)
T PRK14027 127 LDSVVQVGA-GGVGNAVAYALVTHGV------QKLQVADLDTSRAQALADVINNA-VGREAVVGV---DARGIEDVIAAA 195 (283)
T ss_pred CCeEEEECC-cHHHHHHHHHHHHCCC------CEEEEEcCCHHHHHHHHHHHhhc-cCcceEEec---CHhHHHHHHhhc
Confidence 457999998 8889999999999883 58999999999999988876310 011111222 223344455679
Q ss_pred cEEeecCCCCCC--CCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCC
Q 012947 90 KLLLNCVGPYRL--HGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSAC 149 (452)
Q Consensus 90 dvVIn~aGp~~~--~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~ 149 (452)
|+|||+...... ...++....+......+|+...+.-+. +-..|++.|..++++.
T Consensus 196 divINaTp~Gm~~~~~~~~~~~~l~~~~~v~D~vY~P~~T~-----ll~~A~~~G~~~~~Gl 252 (283)
T PRK14027 196 DGVVNATPMGMPAHPGTAFDVSCLTKDHWVGDVVYMPIETE-----LLKAARALGCETLDGT 252 (283)
T ss_pred CEEEEcCCCCCCCCCCCCCCHHHcCCCcEEEEcccCCCCCH-----HHHHHHHCCCEEEccH
Confidence 999999632211 112332333444555788877654322 2356778888887654
No 303
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=97.83 E-value=6.6e-05 Score=73.81 Aligned_cols=129 Identities=17% Similarity=0.151 Sum_probs=85.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+++|+|+ |.+|+.++..|++.+ .++.+.+|+.++++++.+++.. ... ....+..+ ....++
T Consensus 117 ~k~vliiGa-Gg~g~aia~~L~~~g-------~~v~v~~R~~~~~~~la~~~~~--~~~--~~~~~~~~-----~~~~~~ 179 (270)
T TIGR00507 117 NQRVLIIGA-GGAARAVALPLLKAD-------CNVIIANRTVSKAEELAERFQR--YGE--IQAFSMDE-----LPLHRV 179 (270)
T ss_pred CCEEEEEcC-cHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHHhh--cCc--eEEechhh-----hcccCc
Confidence 457999998 799999999999887 7899999999999888887641 111 12222211 123579
Q ss_pred cEEeecCCCCCCC---CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhh
Q 012947 90 KLLLNCVGPYRLH---GDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQ 166 (452)
Q Consensus 90 dvVIn~aGp~~~~---~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~ 166 (452)
|+||||.+..... ..++.......+...+|++..+.-+ .+.+.|++.|+.++.+. +|..+-+...
T Consensus 180 DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p~~T-----~ll~~A~~~G~~~vdG~-------~Ml~~Qa~~~ 247 (270)
T TIGR00507 180 DLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYNPGET-----PFLAEAKSLGTKTIDGL-------GMLVAQAALA 247 (270)
T ss_pred cEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccCCCCC-----HHHHHHHHCCCeeeCCH-------HHHHHHHHHH
Confidence 9999998643211 1123234455677899998876543 24567888898887653 4555555444
Q ss_pred c
Q 012947 167 W 167 (452)
Q Consensus 167 ~ 167 (452)
+
T Consensus 248 f 248 (270)
T TIGR00507 248 F 248 (270)
T ss_pred H
Confidence 4
No 304
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=97.81 E-value=0.00015 Score=71.92 Aligned_cols=122 Identities=17% Similarity=0.110 Sum_probs=79.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+++|+|| |.++++++..|++.|. .++.|+.|+.+|.+++.+++.. ...+.. +...+++...+.++
T Consensus 125 ~k~vlvlGa-GGaarai~~aL~~~G~------~~i~I~nRt~~ka~~La~~~~~----~~~~~~--~~~~~~~~~~~~~~ 191 (282)
T TIGR01809 125 GFRGLVIGA-GGTSRAAVYALASLGV------TDITVINRNPDKLSRLVDLGVQ----VGVITR--LEGDSGGLAIEKAA 191 (282)
T ss_pred CceEEEEcC-cHHHHHHHHHHHHcCC------CeEEEEeCCHHHHHHHHHHhhh----cCccee--ccchhhhhhcccCC
Confidence 467999998 8899999999999883 4799999999999999887631 111211 22224455666789
Q ss_pred cEEeecCCCCCCCCHHHHHHHH--------HhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCC
Q 012947 90 KLLLNCVGPYRLHGDPVAAACV--------HSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSAC 149 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~--------~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~ 149 (452)
|+||||...........+..+. ......+|+...+.-+ .+-..|++.|..++++.
T Consensus 192 DiVInaTp~g~~~~~~~l~~~~~~~~~~~~~~~~~v~D~vY~P~~T-----~ll~~A~~~G~~~~~Gl 254 (282)
T TIGR01809 192 EVLVSTVPADVPADYVDLFATVPFLLLKRKSSEGIFLDAAYDPWPT-----PLVAIVSAAGWRVISGL 254 (282)
T ss_pred CEEEECCCCCCCCCHHHhhhhhhhhccccCCCCcEEEEEeeCCCCC-----HHHHHHHHCCCEEECcH
Confidence 9999997543222222222111 1244578887654332 22356777888887654
No 305
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.80 E-value=0.00025 Score=71.55 Aligned_cols=138 Identities=14% Similarity=0.045 Sum_probs=79.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~--~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
.+|.|+||+|.+|..++..|+..+-.......++.+.++++ ++++..+.++.......... ..+. ....+.+++
T Consensus 1 ~KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~--~~i~--~~~~~~~~~ 76 (323)
T cd00704 1 LHVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKG--VVIT--TDPEEAFKD 76 (323)
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccCC--cEEe--cChHHHhCC
Confidence 47999999999999999999876521100114699999987 65544433332100000000 0111 235788999
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhc
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQW 167 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~ 167 (452)
+|+||++||.-...++.=.+... .....++.+.....+.+...++.|+. +-|-|+.++.+.+..
T Consensus 77 aDiVVitAG~~~~~g~tR~dll~----------~N~~i~~~i~~~i~~~~~~~~iiivv-----sNPvD~~t~~~~k~s 140 (323)
T cd00704 77 VDVAILVGAFPRKPGMERADLLR----------KNAKIFKEQGEALNKVAKPTVKVLVV-----GNPANTNALIALKNA 140 (323)
T ss_pred CCEEEEeCCCCCCcCCcHHHHHH----------HhHHHHHHHHHHHHHhCCCCeEEEEe-----CCcHHHHHHHHHHHc
Confidence 99999999965544422111111 11234455544444443234444442 378899999887765
No 306
>PRK14982 acyl-ACP reductase; Provisional
Probab=97.80 E-value=8.6e-05 Score=75.08 Aligned_cols=119 Identities=14% Similarity=0.120 Sum_probs=78.2
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHc-CCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 9 ELFDVIILGASGFTGKYVVREALKL-FNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~-g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
+..+|+|+||+|++|+.++++|+.+ ++ .++.+.+|+.+++.++.+++. ..|+ .++.+.+.
T Consensus 154 ~~k~VLVtGAtG~IGs~lar~L~~~~gv------~~lilv~R~~~rl~~La~el~----------~~~i---~~l~~~l~ 214 (340)
T PRK14982 154 SKATVAVVGATGDIGSAVCRWLDAKTGV------AELLLVARQQERLQELQAELG----------GGKI---LSLEEALP 214 (340)
T ss_pred CCCEEEEEccChHHHHHHHHHHHhhCCC------CEEEEEcCCHHHHHHHHHHhc----------cccH---HhHHHHHc
Confidence 3468999999999999999999864 43 589999999999988777652 1222 24678889
Q ss_pred CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhh
Q 012947 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAE 157 (452)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~d 157 (452)
++|+|||+++..... .+-..-+..+.-.||+.-....-... .+ .++.++.+ |.-..|.|
T Consensus 215 ~aDiVv~~ts~~~~~--~I~~~~l~~~~~viDiAvPRDVd~~v-------~~-~~V~v~~g-G~V~~p~~ 273 (340)
T PRK14982 215 EADIVVWVASMPKGV--EIDPETLKKPCLMIDGGYPKNLDTKV-------QG-PGIHVLKG-GIVEHSLD 273 (340)
T ss_pred cCCEEEECCcCCcCC--cCCHHHhCCCeEEEEecCCCCCCccc-------CC-CCEEEEeC-CccccCCC
Confidence 999999999853221 01111224556688887654432221 12 56766654 34444544
No 307
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=97.78 E-value=7.1e-05 Score=73.84 Aligned_cols=132 Identities=22% Similarity=0.233 Sum_probs=86.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+++|+|| |+.+++++-.|++.|. .++.|+.|+.++.+++.+.+.. ....+...+..+.+.+. +.
T Consensus 126 ~~~vlilGA-GGAarAv~~aL~~~g~------~~i~V~NRt~~ra~~La~~~~~---~~~~~~~~~~~~~~~~~----~~ 191 (283)
T COG0169 126 GKRVLILGA-GGAARAVAFALAEAGA------KRITVVNRTRERAEELADLFGE---LGAAVEAAALADLEGLE----EA 191 (283)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHcCC------CEEEEEeCCHHHHHHHHHHhhh---ccccccccccccccccc----cc
Confidence 467999998 7789999999999994 5899999999999999888752 11111222333322222 78
Q ss_pred cEEeecCCCCCCC--CH-HHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhh
Q 012947 90 KLLLNCVGPYRLH--GD-PVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQ 166 (452)
Q Consensus 90 dvVIn~aGp~~~~--~~-~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~ 166 (452)
|+|||+....... +. ++-..+.....-..|+-..+.-+ .+-+.|++.|..++++.+ |.++-++..
T Consensus 192 dliINaTp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~P~~T-----plL~~A~~~G~~~idGl~-------Mlv~Qaa~a 259 (283)
T COG0169 192 DLLINATPVGMAGPEGDSPVPAELLPKGAIVYDVVYNPLET-----PLLREARAQGAKTIDGLG-------MLVHQAAEA 259 (283)
T ss_pred CEEEECCCCCCCCCCCCCCCcHHhcCcCCEEEEeccCCCCC-----HHHHHHHHcCCeEECcHH-------HHHHHHHHH
Confidence 9999997533221 22 33345666666677887655422 234567888988776643 455555444
Q ss_pred c
Q 012947 167 W 167 (452)
Q Consensus 167 ~ 167 (452)
+
T Consensus 260 F 260 (283)
T COG0169 260 F 260 (283)
T ss_pred H
Confidence 4
No 308
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.74 E-value=3.8e-05 Score=76.72 Aligned_cols=34 Identities=9% Similarity=-0.115 Sum_probs=29.8
Q ss_pred CCeEEEEcCC--chHHHHHHHHHHHcCCCCCCCceEEEEEecC
Q 012947 10 LFDVIILGAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRN 50 (452)
Q Consensus 10 ~~~ilV~GAT--G~iG~~va~~L~~~g~~~~~~~~~v~iagR~ 50 (452)
...++||||+ .+||+++++.|+++| ++|++..|.
T Consensus 8 gk~alITGa~~~~GIG~a~A~~la~~G-------a~Vvv~~~~ 43 (299)
T PRK06300 8 GKIAFIAGIGDDQGYGWGIAKALAEAG-------ATILVGTWV 43 (299)
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHCC-------CEEEEEecc
Confidence 3579999995 899999999999999 899997754
No 309
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=97.72 E-value=0.00022 Score=73.05 Aligned_cols=79 Identities=13% Similarity=0.021 Sum_probs=58.9
Q ss_pred CCCeEEEEcCCchHHHH--HHHHHHHcCCCCCCCceEEEEEecChhH---------------HHHHHHHhCCCCCCCccE
Q 012947 9 ELFDVIILGASGFTGKY--VVREALKLFNFPSSPIKSLALAGRNPTR---------------VKQALQWASPSHSLSIPI 71 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~--va~~L~~~g~~~~~~~~~v~iagR~~~k---------------l~~l~~~l~~~~~~~v~~ 71 (452)
...++||+||++.+|.+ +++.| +.| .++++.++..++ +++..++. ...+..
T Consensus 40 ggK~aLVTGaSsGIGlA~~IA~al-~~G-------A~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~----G~~a~~ 107 (398)
T PRK13656 40 GPKKVLVIGASSGYGLASRIAAAF-GAG-------ADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAA----GLYAKS 107 (398)
T ss_pred CCCEEEEECCCchHhHHHHHHHHH-HcC-------CeEEEEecCcchhhhcccccccchHHHHHHHHHhc----CCceEE
Confidence 35689999999999999 89999 888 777777753321 22233322 234567
Q ss_pred EEEeCCCHHHHHHHHc-------CccEEeecCCCC
Q 012947 72 LTADTTDPPSLHRLCS-------QTKLLLNCVGPY 99 (452)
Q Consensus 72 v~~Dl~d~~sl~~~~~-------~~dvVIn~aGp~ 99 (452)
+.+|++++++++++++ +.|+|||++|..
T Consensus 108 i~~DVss~E~v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 108 INGDAFSDEIKQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred EEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence 8999999999888776 579999999843
No 310
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=97.71 E-value=0.0005 Score=60.92 Aligned_cols=129 Identities=16% Similarity=0.155 Sum_probs=82.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC-CCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~-~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
++|.|+||+|.+|+.++-.|...+- .-++.+.++++++++....++.. ............ .+ .+.++++
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l-----~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~-~~----~~~~~~a 70 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGL-----ADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS-GD----YEALKDA 70 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTT-----SSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE-SS----GGGGTTE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-----CCceEEeccCcccceeeehhhhhhhhhccccccccc-cc----ccccccc
Confidence 4899999999999999999999863 14799999999988877766632 001112222222 33 4457899
Q ss_pred cEEeecCCCCCCCCH---HHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhh
Q 012947 90 KLLLNCVGPYRLHGD---PVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQ 166 (452)
Q Consensus 90 dvVIn~aGp~~~~~~---~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~ 166 (452)
|+||.++|.....++ .+++.. ...++++..+..+.+ ..++.++- +-|-|+.++.+.+.
T Consensus 71 Divvitag~~~~~g~sR~~ll~~N-------------~~i~~~~~~~i~~~~-p~~~vivv-----tNPvd~~t~~~~~~ 131 (141)
T PF00056_consen 71 DIVVITAGVPRKPGMSRLDLLEAN-------------AKIVKEIAKKIAKYA-PDAIVIVV-----TNPVDVMTYVAQKY 131 (141)
T ss_dssp SEEEETTSTSSSTTSSHHHHHHHH-------------HHHHHHHHHHHHHHS-TTSEEEE------SSSHHHHHHHHHHH
T ss_pred cEEEEeccccccccccHHHHHHHh-------------HhHHHHHHHHHHHhC-CccEEEEe-----CCcHHHHHHHHHHh
Confidence 999999997554442 222222 234455544444444 23444442 45889999988876
Q ss_pred cC
Q 012947 167 WI 168 (452)
Q Consensus 167 ~~ 168 (452)
-.
T Consensus 132 s~ 133 (141)
T PF00056_consen 132 SG 133 (141)
T ss_dssp HT
T ss_pred hC
Confidence 54
No 311
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=97.70 E-value=0.00023 Score=73.22 Aligned_cols=106 Identities=19% Similarity=0.243 Sum_probs=71.6
Q ss_pred CCCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCH-HHHHH
Q 012947 6 QIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDP-PSLHR 84 (452)
Q Consensus 6 ~~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~-~sl~~ 84 (452)
.+.++.+|+|.||||.+|+.+++.|.++| +.+....|+.++.+.+..... .......+..|...+ +.+..
T Consensus 75 ~~~~~~~VlVvGatG~vG~~iv~~llkrg-------f~vra~VRd~~~a~~~~~~~~--~d~~~~~v~~~~~~~~d~~~~ 145 (411)
T KOG1203|consen 75 NSKKPTTVLVVGATGKVGRRIVKILLKRG-------FSVRALVRDEQKAEDLLGVFF--VDLGLQNVEADVVTAIDILKK 145 (411)
T ss_pred CCCCCCeEEEecCCCchhHHHHHHHHHCC-------CeeeeeccChhhhhhhhcccc--cccccceeeeccccccchhhh
Confidence 34567889999999999999999999999 899999999999887765111 123445555554433 33344
Q ss_pred HHcC----ccEEeecCCCCCC-----C--------CHHHHHHHHHhCC-cEEEe
Q 012947 85 LCSQ----TKLLLNCVGPYRL-----H--------GDPVAAACVHSGC-DYLDI 120 (452)
Q Consensus 85 ~~~~----~dvVIn~aGp~~~-----~--------~~~vv~ac~~~g~-~yvDl 120 (452)
+++. ..+++-|+|-... + -.++++||...|+ |++-+
T Consensus 146 ~~~~~~~~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv 199 (411)
T KOG1203|consen 146 LVEAVPKGVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLV 199 (411)
T ss_pred hhhhccccceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhCCceEEEE
Confidence 4443 3477777763211 1 1678888888888 44444
No 312
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=97.68 E-value=9e-05 Score=75.45 Aligned_cols=101 Identities=15% Similarity=0.167 Sum_probs=65.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCcc-EEEEeCCCHHHHHHHHcCc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIP-ILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~-~v~~Dl~d~~sl~~~~~~~ 89 (452)
++|.|+||||++|+.+++.|.++.. .++..+.++.++.+.+.+... .+. ....++++.+.. ..+++
T Consensus 3 ~kVaIiGAtG~vG~~l~~~L~~~p~------~elv~v~~~~~~g~~l~~~~~-----~~~~~~~~~~~~~~~~--~~~~v 69 (343)
T PRK00436 3 IKVGIVGASGYTGGELLRLLLNHPE------VEIVAVTSRSSAGKPLSDVHP-----HLRGLVDLVLEPLDPE--ILAGA 69 (343)
T ss_pred eEEEEECCCCHHHHHHHHHHHcCCC------ceEEEEECccccCcchHHhCc-----ccccccCceeecCCHH--HhcCC
Confidence 6899999999999999999997642 676555543333222332221 111 111123232222 44789
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHH
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEF 126 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~ 126 (452)
|+|+.|.+.. ....++.+|.++|++.||+++...+
T Consensus 70 D~Vf~alP~~--~~~~~v~~a~~aG~~VID~S~~fR~ 104 (343)
T PRK00436 70 DVVFLALPHG--VSMDLAPQLLEAGVKVIDLSADFRL 104 (343)
T ss_pred CEEEECCCcH--HHHHHHHHHHhCCCEEEECCcccCC
Confidence 9999988543 2367888899999999999987655
No 313
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=97.64 E-value=0.00038 Score=69.18 Aligned_cols=137 Identities=14% Similarity=0.127 Sum_probs=85.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh---hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP---TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~---~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
..+++|+|| |+.+++++-.|+..+. .++.+..|+. +|.+++.+++.. .....+...++.+.+.+.+.+
T Consensus 124 ~k~vlvlGa-GGaarAi~~~l~~~g~------~~i~i~nRt~~~~~ka~~la~~~~~--~~~~~~~~~~~~~~~~l~~~~ 194 (288)
T PRK12749 124 GKTMVLLGA-GGASTAIGAQGAIEGL------KEIKLFNRRDEFFDKALAFAQRVNE--NTDCVVTVTDLADQQAFAEAL 194 (288)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCC------CEEEEEeCCccHHHHHHHHHHHhhh--ccCceEEEechhhhhhhhhhc
Confidence 357999998 6679999999998873 5899999994 588888877642 111122233343334466667
Q ss_pred cCccEEeecCCCCCCC--CH-HHHH-HHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHH
Q 012947 87 SQTKLLLNCVGPYRLH--GD-PVAA-ACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMF 162 (452)
Q Consensus 87 ~~~dvVIn~aGp~~~~--~~-~vv~-ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~ 162 (452)
.++|+|||+...-... .. ++.+ ..+..+...+|+...+.-+ .+-+.|++.|..++++. .|..+-
T Consensus 195 ~~aDivINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~vY~P~~T-----~ll~~A~~~G~~~~~Gl-------~ML~~Q 262 (288)
T PRK12749 195 ASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPHMT-----KLLQQAQQAGCKTIDGY-------GMLLWQ 262 (288)
T ss_pred ccCCEEEECCCCCCCCCCCCCCCCcHHHCCCCCEEEEecCCCccC-----HHHHHHHHCCCeEECCH-------HHHHHH
Confidence 7899999986432211 11 1111 2233455577888765533 23466788898887654 355555
Q ss_pred Hhhhc
Q 012947 163 NSRQW 167 (452)
Q Consensus 163 ~~~~~ 167 (452)
+...+
T Consensus 263 a~~~f 267 (288)
T PRK12749 263 GAEQF 267 (288)
T ss_pred HHHHH
Confidence 54444
No 314
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=97.62 E-value=0.0001 Score=75.10 Aligned_cols=103 Identities=18% Similarity=0.270 Sum_probs=63.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEE-EEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLA-LAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~-iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
++|.|+||||++|+.+++.|.++.. .++. +++++.+..+.+.+... ..........+-.| .+++.+++
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~------~el~~l~~s~~sagk~~~~~~~--~l~~~~~~~~~~~~---~~~~~~~~ 69 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPE------VEITYLVSSRESAGKPVSEVHP--HLRGLVDLNLEPID---EEEIAEDA 69 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCC------ceEEEEeccchhcCCChHHhCc--cccccCCceeecCC---HHHhhcCC
Confidence 4799999999999999999997732 6766 44544322222222221 00011011111113 23444689
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHH
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEF 126 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~ 126 (452)
|+||.|.+. . ....++..+.+.|++.||+++...+
T Consensus 70 DvVf~alP~-~-~s~~~~~~~~~~G~~VIDlS~~fR~ 104 (346)
T TIGR01850 70 DVVFLALPH-G-VSAELAPELLAAGVKVIDLSADFRL 104 (346)
T ss_pred CEEEECCCc-h-HHHHHHHHHHhCCCEEEeCChhhhc
Confidence 999999842 2 3367888888999999999986544
No 315
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=97.61 E-value=0.0004 Score=82.96 Aligned_cols=88 Identities=14% Similarity=0.201 Sum_probs=62.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHH---HHHHHHhC---C---CCCCCccEEEEeCCC--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRV---KQALQWAS---P---SHSLSIPILTADTTD-- 78 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl---~~l~~~l~---~---~~~~~v~~v~~Dl~d-- 78 (452)
..+|+|||||||+|.+++++|++++.. ...+|....|+..+. +.+.+.+. . ....++.++.+|+++
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~---~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~ 1047 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSN---SNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEK 1047 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCC---CCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCcc
Confidence 478999999999999999999987610 116888889975432 22222110 0 011367889999974
Q ss_pred ----HHHHHHHHcCccEEeecCCCCC
Q 012947 79 ----PPSLHRLCSQTKLLLNCVGPYR 100 (452)
Q Consensus 79 ----~~sl~~~~~~~dvVIn~aGp~~ 100 (452)
.+...++..++|+|||||++..
T Consensus 1048 lgl~~~~~~~l~~~~d~iiH~Aa~~~ 1073 (1389)
T TIGR03443 1048 FGLSDEKWSDLTNEVDVIIHNGALVH 1073 (1389)
T ss_pred CCcCHHHHHHHHhcCCEEEECCcEec
Confidence 4667788889999999998754
No 316
>PTZ00325 malate dehydrogenase; Provisional
Probab=97.57 E-value=0.0013 Score=66.34 Aligned_cols=82 Identities=21% Similarity=0.212 Sum_probs=58.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+|.|+||.|.+|..++..|+..+. ..++++.+++ +++....++. +........+.+|+.++.+.++++
T Consensus 8 ~~KI~IiGaaG~VGs~~a~~l~~~~~-----~~elvL~Di~--~~~g~a~Dl~---~~~~~~~v~~~td~~~~~~~l~ga 77 (321)
T PTZ00325 8 MFKVAVLGAAGGIGQPLSLLLKQNPH-----VSELSLYDIV--GAPGVAADLS---HIDTPAKVTGYADGELWEKALRGA 77 (321)
T ss_pred CCEEEEECCCCHHHHHHHHHHhcCCC-----CCEEEEEecC--CCcccccchh---hcCcCceEEEecCCCchHHHhCCC
Confidence 35899999999999999999986552 1589999993 3333222332 111134456777766678899999
Q ss_pred cEEeecCCCCCC
Q 012947 90 KLLLNCVGPYRL 101 (452)
Q Consensus 90 dvVIn~aGp~~~ 101 (452)
|+||+++|....
T Consensus 78 DvVVitaG~~~~ 89 (321)
T PTZ00325 78 DLVLICAGVPRK 89 (321)
T ss_pred CEEEECCCCCCC
Confidence 999999997544
No 317
>PRK13304 L-aspartate dehydrogenase; Reviewed
Probab=97.55 E-value=0.00081 Score=65.98 Aligned_cols=116 Identities=14% Similarity=0.173 Sum_probs=79.1
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceE-EEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKS-LALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~-v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
++|.|+|. |.+|+.+++.|.+.++ + .+ +.+.+|+.++.+++.+.++ +. . .+| +++++.++
T Consensus 2 mrIgIIG~-G~iG~~ia~~l~~~~~-~----~elv~v~d~~~~~a~~~a~~~~------~~--~--~~~---~~ell~~~ 62 (265)
T PRK13304 2 LKIGIVGC-GAIASLITKAILSGRI-N----AELYAFYDRNLEKAENLASKTG------AK--A--CLS---IDELVEDV 62 (265)
T ss_pred CEEEEECc-cHHHHHHHHHHHcCCC-C----eEEEEEECCCHHHHHHHHHhcC------Ce--e--ECC---HHHHhcCC
Confidence 58999996 9999999999987531 1 44 5678999988877766432 11 1 123 45555789
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEc
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVS 147 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~ 147 (452)
|+|+.|+++... ..++..+++.|.|.+.++-...........+.+.|+++|+.+..
T Consensus 63 DvVvi~a~~~~~--~~~~~~al~~Gk~Vvv~s~gAl~d~~~~~~L~~aA~~~g~~l~v 118 (265)
T PRK13304 63 DLVVECASVNAV--EEVVPKSLENGKDVIIMSVGALADKELFLKLYKLAKENNCKIYL 118 (265)
T ss_pred CEEEEcCChHHH--HHHHHHHHHcCCCEEEEchHHhcCHHHHHHHHHHHHHcCCEEEE
Confidence 999999976433 56778888999998887641111123334557788888877654
No 318
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=97.55 E-value=0.00021 Score=72.53 Aligned_cols=97 Identities=18% Similarity=0.128 Sum_probs=67.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
++|.|+||||++|+.+++.|.+++.+ ..++..+.|+.+..+.+. + ....+...|+++. .++++|
T Consensus 2 ~~V~IvGAtG~vG~~l~~lL~~~~hp----~~~l~~l~s~~~~g~~l~--~-----~g~~i~v~d~~~~-----~~~~vD 65 (334)
T PRK14874 2 YNVAVVGATGAVGREMLNILEERNFP----VDKLRLLASARSAGKELS--F-----KGKELKVEDLTTF-----DFSGVD 65 (334)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCC----cceEEEEEccccCCCeee--e-----CCceeEEeeCCHH-----HHcCCC
Confidence 57999999999999999999987521 256677776654433321 1 1234555566532 236899
Q ss_pred EEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHH
Q 012947 91 LLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPE 125 (452)
Q Consensus 91 vVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~ 125 (452)
+||.|+|.. ....++....+.|+..||+++.+.
T Consensus 66 vVf~A~g~g--~s~~~~~~~~~~G~~VIDlS~~~R 98 (334)
T PRK14874 66 IALFSAGGS--VSKKYAPKAAAAGAVVIDNSSAFR 98 (334)
T ss_pred EEEECCChH--HHHHHHHHHHhCCCEEEECCchhh
Confidence 999998754 235677777888999999998653
No 319
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=97.54 E-value=0.0004 Score=60.85 Aligned_cols=105 Identities=15% Similarity=0.274 Sum_probs=70.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-------------------hhHHHHHHHHhCC-CCCCC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASP-SHSLS 68 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-------------------~~kl~~l~~~l~~-~~~~~ 68 (452)
|+.+|+|.|+ |.+|..+++.|++.|- -++.+++.+ ..|.+.+.+.+.. ....+
T Consensus 1 r~~~v~iiG~-G~vGs~va~~L~~~Gv------~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~ 73 (135)
T PF00899_consen 1 RNKRVLIIGA-GGVGSEVAKNLARSGV------GKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVE 73 (135)
T ss_dssp HT-EEEEEST-SHHHHHHHHHHHHHTT------SEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSE
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHhCC------CceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCcee
Confidence 3568999998 7899999999999984 477777754 1233333333321 11234
Q ss_pred ccEEEEeCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecC
Q 012947 69 IPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISG 122 (452)
Q Consensus 69 v~~v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsg 122 (452)
+..+..++ +.+.+.+.++++|+||+|...... ...+.+.|.+.+..+|+...
T Consensus 74 v~~~~~~~-~~~~~~~~~~~~d~vi~~~d~~~~-~~~l~~~~~~~~~p~i~~~~ 125 (135)
T PF00899_consen 74 VEAIPEKI-DEENIEELLKDYDIVIDCVDSLAA-RLLLNEICREYGIPFIDAGV 125 (135)
T ss_dssp EEEEESHC-SHHHHHHHHHTSSEEEEESSSHHH-HHHHHHHHHHTT-EEEEEEE
T ss_pred eeeeeccc-ccccccccccCCCEEEEecCCHHH-HHHHHHHHHHcCCCEEEEEe
Confidence 45555556 457788888999999999865322 24577788888888877653
No 320
>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=97.51 E-value=0.00026 Score=70.91 Aligned_cols=106 Identities=19% Similarity=0.246 Sum_probs=68.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
.++|.|.|||||+|..+.+.|+.+.. .++.++..+..+-+.+.+..- ......-.....-|++.+ ..+++
T Consensus 2 ~~kV~IvGasGYtG~EL~rlL~~Hp~------ve~~~~ss~~~~g~~~~~~~p--~l~g~~~l~~~~~~~~~~--~~~~~ 71 (349)
T COG0002 2 MIKVGIVGASGYTGLELLRLLAGHPD------VELILISSRERAGKPVSDVHP--NLRGLVDLPFQTIDPEKI--ELDEC 71 (349)
T ss_pred CceEEEEcCCCCcHHHHHHHHhcCCC------eEEEEeechhhcCCchHHhCc--ccccccccccccCChhhh--hcccC
Confidence 46899999999999999999999863 676666554433333333221 001111122222233333 45579
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHH
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFM 127 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~ 127 (452)
|+||.|.- ......++....+.|+..||+|++..+-
T Consensus 72 DvvFlalP--hg~s~~~v~~l~~~g~~VIDLSadfR~~ 107 (349)
T COG0002 72 DVVFLALP--HGVSAELVPELLEAGCKVIDLSADFRLK 107 (349)
T ss_pred CEEEEecC--chhHHHHHHHHHhCCCeEEECCcccccC
Confidence 99999872 2233678888888899999999986653
No 321
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=97.48 E-value=0.00072 Score=63.64 Aligned_cols=104 Identities=18% Similarity=0.256 Sum_probs=72.1
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-------------------hhHHHHHHHHhCC-CCCCC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASP-SHSLS 68 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-------------------~~kl~~l~~~l~~-~~~~~ 68 (452)
++.+|+|+|+ |.+|..+++.|++.|. -++.+++++ ..|.+.+.+.+.. ....+
T Consensus 20 ~~~~VlviG~-GglGs~ia~~La~~Gv------~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~ 92 (202)
T TIGR02356 20 LNSHVLIIGA-GGLGSPAALYLAGAGV------GTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQ 92 (202)
T ss_pred cCCCEEEECC-CHHHHHHHHHHHHcCC------CeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCE
Confidence 3567999997 7889999999999983 478888876 3455555555432 11223
Q ss_pred ccEEEEeCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEec
Q 012947 69 IPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 69 v~~v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDls 121 (452)
+..+..++ +.+.+.+.++++|+||.|...+. ....+.+.|.+.++.+|+..
T Consensus 93 i~~~~~~i-~~~~~~~~~~~~D~Vi~~~d~~~-~r~~l~~~~~~~~ip~i~~~ 143 (202)
T TIGR02356 93 VTALKERV-TAENLELLINNVDLVLDCTDNFA-TRYLINDACVALGTPLISAA 143 (202)
T ss_pred EEEehhcC-CHHHHHHHHhCCCEEEECCCCHH-HHHHHHHHHHHcCCCEEEEE
Confidence 33333344 34678888999999999986432 22457788988888888765
No 322
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=97.44 E-value=0.0011 Score=66.97 Aligned_cols=135 Identities=13% Similarity=0.077 Sum_probs=76.0
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhH--HHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTR--VKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~k--l~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
+|.|+||+|.+|..++..|+..+-.......++.+.++++.+ ++....++.. ...... ..+.-.....+.++++
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~g~~~Dl~d---~~~~~~-~~~~~~~~~~~~~~~a 76 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLEGVVMELMD---CAFPLL-DGVVPTHDPAVAFTDV 76 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccccceeEeehhc---ccchhc-CceeccCChHHHhCCC
Confidence 589999999999999999987652100011369999996543 4433333321 000000 0000001346788999
Q ss_pred cEEeecCCCCCCCCH---HHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhh
Q 012947 90 KLLLNCVGPYRLHGD---PVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQ 166 (452)
Q Consensus 90 dvVIn~aGp~~~~~~---~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~ 166 (452)
|+||++||.....++ .+++.. ...++.+.....+.+...++.|+.+ -|-|+++|.+.+.
T Consensus 77 DiVVitAG~~~~~~~tr~~ll~~N-------------~~i~k~i~~~i~~~~~~~~iiivvs-----NPvDv~t~v~~~~ 138 (324)
T TIGR01758 77 DVAILVGAFPRKEGMERRDLLSKN-------------VKIFKEQGRALDKLAKKDCKVLVVG-----NPANTNALVLSNY 138 (324)
T ss_pred CEEEEcCCCCCCCCCcHHHHHHHH-------------HHHHHHHHHHHHhhCCCCeEEEEeC-----CcHHHHHHHHHHH
Confidence 999999996544332 222222 2234444444433332334444433 6889999999888
Q ss_pred cC
Q 012947 167 WI 168 (452)
Q Consensus 167 ~~ 168 (452)
..
T Consensus 139 sg 140 (324)
T TIGR01758 139 AP 140 (324)
T ss_pred cC
Confidence 73
No 323
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=97.44 E-value=0.0011 Score=66.98 Aligned_cols=140 Identities=14% Similarity=0.047 Sum_probs=82.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~--~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
++++|.|+||+|.+|..++-.|+..+-.+.....++.+.++++ ++++....++.........-+. +. ....+.+
T Consensus 2 ~p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~--i~--~~~~~~~ 77 (323)
T TIGR01759 2 KPVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVV--AT--TDPEEAF 77 (323)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcE--Ee--cChHHHh
Confidence 5799999999999999999999887631111113799999965 5566666655310000000001 11 1235678
Q ss_pred cCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhh
Q 012947 87 SQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQ 166 (452)
Q Consensus 87 ~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~ 166 (452)
+++|+||.+||.....++.=.+.... ....++.+.....+.+...++.|+.+ -|-|+.+|.+.+.
T Consensus 78 ~daDvVVitAG~~~k~g~tR~dll~~----------Na~i~~~i~~~i~~~~~~~~iiivvs-----NPvDv~t~v~~k~ 142 (323)
T TIGR01759 78 KDVDAALLVGAFPRKPGMERADLLSK----------NGKIFKEQGKALNKVAKKDVKVLVVG-----NPANTNALIASKN 142 (323)
T ss_pred CCCCEEEEeCCCCCCCCCcHHHHHHH----------HHHHHHHHHHHHHhhCCCCeEEEEeC-----CcHHHHHHHHHHH
Confidence 89999999999755444221111111 12334444444444443344444433 6889999998888
Q ss_pred c
Q 012947 167 W 167 (452)
Q Consensus 167 ~ 167 (452)
.
T Consensus 143 s 143 (323)
T TIGR01759 143 A 143 (323)
T ss_pred c
Confidence 7
No 324
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=97.43 E-value=0.00076 Score=64.58 Aligned_cols=129 Identities=20% Similarity=0.222 Sum_probs=88.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-HcCc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~-~~~~ 89 (452)
++++|.|+ |-+|..+|+.|.+.| +.|+++.+++++.++...+ ......+.+|.+|++.|+++ +.++
T Consensus 1 m~iiIiG~-G~vG~~va~~L~~~g-------~~Vv~Id~d~~~~~~~~~~-----~~~~~~v~gd~t~~~~L~~agi~~a 67 (225)
T COG0569 1 MKIIIIGA-GRVGRSVARELSEEG-------HNVVLIDRDEERVEEFLAD-----ELDTHVVIGDATDEDVLEEAGIDDA 67 (225)
T ss_pred CEEEEECC-cHHHHHHHHHHHhCC-------CceEEEEcCHHHHHHHhhh-----hcceEEEEecCCCHHHHHhcCCCcC
Confidence 47899998 788999999999998 7999999999998875442 13568899999999999998 8899
Q ss_pred cEEeecCCCCCCCCHHHHH---HHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhh
Q 012947 90 KLLLNCVGPYRLHGDPVAA---ACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQ 166 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~---ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~ 166 (452)
|++|-+.|--. .+++- ++.+.|+.++-.....+. |.+..++-|+..+ -.|....+..+.+.
T Consensus 68 D~vva~t~~d~---~N~i~~~la~~~~gv~~viar~~~~~-------~~~~~~~~g~~~i------i~Pe~~~~~~l~~~ 131 (225)
T COG0569 68 DAVVAATGNDE---VNSVLALLALKEFGVPRVIARARNPE-------HEKVLEKLGADVI------ISPEKLAAKRLARL 131 (225)
T ss_pred CEEEEeeCCCH---HHHHHHHHHHHhcCCCcEEEEecCHH-------HHHHHHHcCCcEE------ECHHHHHHHHHHHH
Confidence 99998876322 33332 223357766654433222 2233344453322 13555666666666
Q ss_pred cC
Q 012947 167 WI 168 (452)
Q Consensus 167 ~~ 168 (452)
+.
T Consensus 132 i~ 133 (225)
T COG0569 132 IV 133 (225)
T ss_pred hc
Confidence 64
No 325
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=97.43 E-value=0.00086 Score=68.13 Aligned_cols=103 Identities=16% Similarity=0.174 Sum_probs=73.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh---------------------hHHHHHHHHhCC-CCCC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP---------------------TRVKQALQWASP-SHSL 67 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~---------------------~kl~~l~~~l~~-~~~~ 67 (452)
..+|+|+|+ |.+|..++++|++.|. -++.+++++. .|.+.+.+.+.. ....
T Consensus 24 ~~~VlIiG~-GglGs~va~~La~aGv------g~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v 96 (338)
T PRK12475 24 EKHVLIVGA-GALGAANAEALVRAGI------GKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEV 96 (338)
T ss_pred CCcEEEECC-CHHHHHHHHHHHHcCC------CEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCc
Confidence 467999998 6799999999999983 4888888863 244444444422 1233
Q ss_pred CccEEEEeCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEec
Q 012947 68 SIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 68 ~v~~v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDls 121 (452)
++..+..|++ ++.++++++++|+||.+...+.. ...+.+.|.+.++.+|...
T Consensus 97 ~i~~~~~~~~-~~~~~~~~~~~DlVid~~D~~~~-r~~in~~~~~~~ip~i~~~ 148 (338)
T PRK12475 97 EIVPVVTDVT-VEELEELVKEVDLIIDATDNFDT-RLLINDLSQKYNIPWIYGG 148 (338)
T ss_pred EEEEEeccCC-HHHHHHHhcCCCEEEEcCCCHHH-HHHHHHHHHHcCCCEEEEE
Confidence 4555666775 46788899999999999865432 2456788888888877654
No 326
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=97.42 E-value=0.00019 Score=72.73 Aligned_cols=100 Identities=20% Similarity=0.295 Sum_probs=63.6
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 8 ~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
++.++|.|+||||++|+.+++.|.+++. +..++..+.. .++..+... + .... .++.+.+.. + ++
T Consensus 2 ~~~~~IaIvGATG~vG~eLlrlL~~~~h----P~~~l~~v~s-~~~aG~~l~-~-----~~~~---l~~~~~~~~-~-~~ 65 (336)
T PRK05671 2 SQPLDIAVVGATGTVGEALVQILEERDF----PVGTLHLLAS-SESAGHSVP-F-----AGKN---LRVREVDSF-D-FS 65 (336)
T ss_pred CCCCEEEEEccCCHHHHHHHHHHhhCCC----CceEEEEEEC-cccCCCeec-c-----CCcc---eEEeeCChH-H-hc
Confidence 3458999999999999999999997542 1245544433 222211111 1 1112 233222221 2 47
Q ss_pred CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHH
Q 012947 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPE 125 (452)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~ 125 (452)
++|+|+.++++. ....+++.+.+.|+..||+++...
T Consensus 66 ~vD~vFla~p~~--~s~~~v~~~~~~G~~VIDlS~~fR 101 (336)
T PRK05671 66 QVQLAFFAAGAA--VSRSFAEKARAAGCSVIDLSGALP 101 (336)
T ss_pred CCCEEEEcCCHH--HHHHHHHHHHHCCCeEEECchhhc
Confidence 899999988632 336788888899999999998764
No 327
>PRK13302 putative L-aspartate dehydrogenase; Provisional
Probab=97.42 E-value=0.0025 Score=62.74 Aligned_cols=120 Identities=17% Similarity=0.197 Sum_probs=81.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEE-EEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLA-LAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~-iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
.+++|-|+|. |.+|+.+++.|.+..+ .+++. +.+|++++.+++.++++. ... .++ ++++++
T Consensus 5 ~~irIGIIG~-G~IG~~~a~~L~~~~~-----~~el~aV~dr~~~~a~~~a~~~g~-----~~~----~~~---~eell~ 66 (271)
T PRK13302 5 PELRVAIAGL-GAIGKAIAQALDRGLP-----GLTLSAVAVRDPQRHADFIWGLRR-----PPP----VVP---LDQLAT 66 (271)
T ss_pred CeeEEEEECc-cHHHHHHHHHHHhcCC-----CeEEEEEECCCHHHHHHHHHhcCC-----Ccc----cCC---HHHHhc
Confidence 3588999996 9999999999987411 16664 789999988777765421 011 123 445567
Q ss_pred CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCC
Q 012947 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGF 151 (452)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~ 151 (452)
++|+|+-|+++.. + ..+...++++|.|.+..+.... .. ..++.+.++++|+.+....|+
T Consensus 67 ~~D~Vvi~tp~~~-h-~e~~~~aL~aGk~Vi~~s~gal--~~-~~~L~~~A~~~g~~l~v~sGa 125 (271)
T PRK13302 67 HADIVVEAAPASV-L-RAIVEPVLAAGKKAIVLSVGAL--LR-NEDLIDLARQNGGQIIVPTGA 125 (271)
T ss_pred CCCEEEECCCcHH-H-HHHHHHHHHcCCcEEEecchhH--Hh-HHHHHHHHHHcCCEEEEcchH
Confidence 8999999996543 2 5677889999999876653211 11 245567788889887544444
No 328
>PLN00106 malate dehydrogenase
Probab=97.41 E-value=0.00098 Score=67.21 Aligned_cols=83 Identities=18% Similarity=0.067 Sum_probs=58.5
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
++.+|.|+||+|.+|..++..|+.++.. .++.+.++++ .+....++. +........++.+.+++.+.+++
T Consensus 17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~-----~el~L~Di~~--~~g~a~Dl~---~~~~~~~i~~~~~~~d~~~~l~~ 86 (323)
T PLN00106 17 PGFKVAVLGAAGGIGQPLSLLMKMNPLV-----SELHLYDIAN--TPGVAADVS---HINTPAQVRGFLGDDQLGDALKG 86 (323)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCC-----CEEEEEecCC--CCeeEchhh---hCCcCceEEEEeCCCCHHHHcCC
Confidence 4579999999999999999999876621 4799999987 222222332 11123344455455568889999
Q ss_pred ccEEeecCCCCCC
Q 012947 89 TKLLLNCVGPYRL 101 (452)
Q Consensus 89 ~dvVIn~aGp~~~ 101 (452)
+|+||++||.-..
T Consensus 87 aDiVVitAG~~~~ 99 (323)
T PLN00106 87 ADLVIIPAGVPRK 99 (323)
T ss_pred CCEEEEeCCCCCC
Confidence 9999999996544
No 329
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.35 E-value=0.0018 Score=66.58 Aligned_cols=74 Identities=20% Similarity=0.204 Sum_probs=60.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
++.+++|+|+ |-+|+.+++.+...| .+|.+.+|+.++++.+...++ ..+..+..+++.+.+.+++
T Consensus 166 ~~~~VlViGa-G~vG~~aa~~a~~lG-------a~V~v~d~~~~~~~~l~~~~g-------~~v~~~~~~~~~l~~~l~~ 230 (370)
T TIGR00518 166 EPGDVTIIGG-GVVGTNAAKMANGLG-------ATVTILDINIDRLRQLDAEFG-------GRIHTRYSNAYEIEDAVKR 230 (370)
T ss_pred CCceEEEEcC-CHHHHHHHHHHHHCC-------CeEEEEECCHHHHHHHHHhcC-------ceeEeccCCHHHHHHHHcc
Confidence 4567999988 889999999999988 789999999999877766543 1233456778889999999
Q ss_pred ccEEeecCC
Q 012947 89 TKLLLNCVG 97 (452)
Q Consensus 89 ~dvVIn~aG 97 (452)
+|+||++++
T Consensus 231 aDvVI~a~~ 239 (370)
T TIGR00518 231 ADLLIGAVL 239 (370)
T ss_pred CCEEEEccc
Confidence 999999984
No 330
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.33 E-value=0.0018 Score=64.29 Aligned_cols=114 Identities=17% Similarity=0.186 Sum_probs=75.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+++|+|+ |.+|+.+++.|...| .+|.+..|+.++++...+ .+ ... . +.+++.+.++++
T Consensus 151 gk~v~IiG~-G~iG~avA~~L~~~G-------~~V~v~~R~~~~~~~~~~-~g------~~~--~---~~~~l~~~l~~a 210 (287)
T TIGR02853 151 GSNVMVLGF-GRTGMTIARTFSALG-------ARVFVGARSSADLARITE-MG------LIP--F---PLNKLEEKVAEI 210 (287)
T ss_pred CCEEEEEcC-hHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHH-CC------Cee--e---cHHHHHHHhccC
Confidence 468999998 789999999999988 799999999987655432 21 111 1 235678888999
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCC
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGF 151 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~ 151 (452)
|+|||++. ........++.. ..+.-.||++..+.-+ .+ +.|++.|+..+.+-|.
T Consensus 211 DiVint~P-~~ii~~~~l~~~-k~~aliIDlas~Pg~t-----df-~~Ak~~G~~a~~~~gl 264 (287)
T TIGR02853 211 DIVINTIP-ALVLTADVLSKL-PKHAVIIDLASKPGGT-----DF-EYAKKRGIKALLAPGL 264 (287)
T ss_pred CEEEECCC-hHHhCHHHHhcC-CCCeEEEEeCcCCCCC-----CH-HHHHHCCCEEEEeCCC
Confidence 99999983 322223333222 3456688887654321 12 4567778776654443
No 331
>PLN00112 malate dehydrogenase (NADP); Provisional
Probab=97.33 E-value=0.0016 Score=68.14 Aligned_cols=142 Identities=13% Similarity=0.036 Sum_probs=86.6
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHHcCCC--CCCCceEEEEEecChhHHHHHHHHhCCCC-CCCccEEEEeCCCHHHHH
Q 012947 7 IPELFDVIILGASGFTGKYVVREALKLFNF--PSSPIKSLALAGRNPTRVKQALQWASPSH-SLSIPILTADTTDPPSLH 83 (452)
Q Consensus 7 ~~~~~~ilV~GATG~iG~~va~~L~~~g~~--~~~~~~~v~iagR~~~kl~~l~~~l~~~~-~~~v~~v~~Dl~d~~sl~ 83 (452)
..++.+|.|+||+|.+|..++-.|+...-. +..-..++.+.++++++++....++.... .....+... ..| .
T Consensus 97 ~~~~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~-~~~----y 171 (444)
T PLN00112 97 WKKLINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIG-IDP----Y 171 (444)
T ss_pred CCCCeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEe-cCC----H
Confidence 446799999999999999999999987110 00011379999999999988877774200 000122211 123 4
Q ss_pred HHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHH
Q 012947 84 RLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFN 163 (452)
Q Consensus 84 ~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~ 163 (452)
+.++++|+||-++|.-...|+.=.+.... ....++.+.....+.+..++++|+-+ -|-|+.+|.+
T Consensus 172 e~~kdaDiVVitAG~prkpG~tR~dLl~~----------N~~I~k~i~~~I~~~a~p~~ivIVVs-----NPvDv~t~v~ 236 (444)
T PLN00112 172 EVFQDAEWALLIGAKPRGPGMERADLLDI----------NGQIFAEQGKALNEVASRNVKVIVVG-----NPCNTNALIC 236 (444)
T ss_pred HHhCcCCEEEECCCCCCCCCCCHHHHHHH----------HHHHHHHHHHHHHHhcCCCeEEEEcC-----CcHHHHHHHH
Confidence 56889999999999755444221111111 12334444444443233345555533 6889999999
Q ss_pred hhhcC
Q 012947 164 SRQWI 168 (452)
Q Consensus 164 ~~~~~ 168 (452)
.+...
T Consensus 237 ~k~sg 241 (444)
T PLN00112 237 LKNAP 241 (444)
T ss_pred HHHcC
Confidence 88774
No 332
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=97.33 E-value=0.0015 Score=66.50 Aligned_cols=103 Identities=16% Similarity=0.209 Sum_probs=72.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh---------------------hHHHHHHHHhCC-CCCC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP---------------------TRVKQALQWASP-SHSL 67 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~---------------------~kl~~l~~~l~~-~~~~ 67 (452)
..+|+|+|+ |++|..++++|++.|. -++.+++++. .|.+.+.+.+.. ....
T Consensus 24 ~~~VlVvG~-GglGs~va~~La~aGv------g~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v 96 (339)
T PRK07688 24 EKHVLIIGA-GALGTANAEMLVRAGV------GKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDV 96 (339)
T ss_pred CCcEEEECC-CHHHHHHHHHHHHcCC------CeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCc
Confidence 467999999 8899999999999983 4889988863 243433333321 1123
Q ss_pred CccEEEEeCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEec
Q 012947 68 SIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 68 ~v~~v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDls 121 (452)
++..+..+++ ++.+.+++++.|+||.|..-+. ....+.++|.+.++.+|..+
T Consensus 97 ~v~~~~~~~~-~~~~~~~~~~~DlVid~~Dn~~-~r~~ln~~~~~~~iP~i~~~ 148 (339)
T PRK07688 97 RVEAIVQDVT-AEELEELVTGVDLIIDATDNFE-TRFIVNDAAQKYGIPWIYGA 148 (339)
T ss_pred EEEEEeccCC-HHHHHHHHcCCCEEEEcCCCHH-HHHHHHHHHHHhCCCEEEEe
Confidence 4455555664 4677888999999999986442 22467788998888877654
No 333
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=97.32 E-value=0.0035 Score=63.06 Aligned_cols=132 Identities=15% Similarity=0.141 Sum_probs=80.3
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC--CCCCCccEEEEeCCCHHHHHH
Q 012947 7 IPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SHSLSIPILTADTTDPPSLHR 84 (452)
Q Consensus 7 ~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~--~~~~~v~~v~~Dl~d~~sl~~ 84 (452)
+.+..+|.|+|| |.+|..++-.|+..+-. -++.+.++++++++....++.. +...++.+ .. .+ .+
T Consensus 3 ~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~-----~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i-~~--~~----~~ 69 (315)
T PRK00066 3 KKQHNKVVLVGD-GAVGSSYAYALVNQGIA-----DELVIIDINKEKAEGDAMDLSHAVPFTSPTKI-YA--GD----YS 69 (315)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhcCCC-----CEEEEEeCCCchhHHHHHHHHhhccccCCeEE-Ee--CC----HH
Confidence 345679999998 99999999999887721 3799999999998888777742 11112222 21 23 23
Q ss_pred HHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHh
Q 012947 85 LCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNS 164 (452)
Q Consensus 85 ~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~ 164 (452)
.++++|+||.++|.....++.=.+.... ....+++......+.+. .+..|+ . +-|.|+.++.+.
T Consensus 70 ~~~~adivIitag~~~k~g~~R~dll~~----------N~~i~~~i~~~i~~~~~-~~~viv-v----sNP~d~~~~~~~ 133 (315)
T PRK00066 70 DCKDADLVVITAGAPQKPGETRLDLVEK----------NLKIFKSIVGEVMASGF-DGIFLV-A----SNPVDILTYATW 133 (315)
T ss_pred HhCCCCEEEEecCCCCCCCCCHHHHHHH----------HHHHHHHHHHHHHHhCC-CeEEEE-c----cCcHHHHHHHHH
Confidence 4789999999999755444211111111 12333443333322222 233333 2 368899998877
Q ss_pred hhc
Q 012947 165 RQW 167 (452)
Q Consensus 165 ~~~ 167 (452)
+..
T Consensus 134 k~s 136 (315)
T PRK00066 134 KLS 136 (315)
T ss_pred HHh
Confidence 764
No 334
>TIGR00036 dapB dihydrodipicolinate reductase.
Probab=97.32 E-value=0.0052 Score=60.34 Aligned_cols=124 Identities=17% Similarity=0.152 Sum_probs=77.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEE-EEecCh-hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLA-LAGRNP-TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~-iagR~~-~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
++|.|+|++|.+|+.+++.+.+... ++++ +++|+. ++..+-..++.. .....+.. .+|.+++ ...
T Consensus 2 ikV~IiGa~G~MG~~i~~~i~~~~~------~elvav~d~~~~~~~~~~~~~~~~--~~~~gv~~--~~d~~~l---~~~ 68 (266)
T TIGR00036 2 IKVAVAGAAGRMGRELIKAALAAEG------LQLVAAFERHGSSLQGTDAGELAG--IGKVGVPV--TDDLEAV---ETD 68 (266)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCC------CEEEEEEecCCccccCCCHHHhcC--cCcCCcee--eCCHHHh---cCC
Confidence 5899999999999999999987642 5544 456432 221111111110 00111111 2344444 356
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCC
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGF 151 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~ 151 (452)
+|+||.+..|... ..+++.|+++|++.|--+- .|..+....+.+.|+++|+.++-+..|
T Consensus 69 ~DvVIdfT~p~~~--~~~~~~al~~g~~vVigtt--g~~~e~~~~l~~aA~~~g~~v~~a~Nf 127 (266)
T TIGR00036 69 PDVLIDFTTPEGV--LNHLKFALEHGVRLVVGTT--GFSEEDKQELADLAEKAGIAAVIAPNF 127 (266)
T ss_pred CCEEEECCChHHH--HHHHHHHHHCCCCEEEECC--CCCHHHHHHHHHHHhcCCccEEEECcc
Confidence 8999999865432 6789999999999775432 344445566778888888877655544
No 335
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=97.31 E-value=0.00058 Score=65.59 Aligned_cols=73 Identities=15% Similarity=0.171 Sum_probs=50.0
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCC--HHHHHHHHcCcc
Q 012947 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTD--PPSLHRLCSQTK 90 (452)
Q Consensus 13 ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d--~~sl~~~~~~~d 90 (452)
.+=-.+||++|++++++|+++| ++|.++.|+.... .. ...++.++.++..+ .+.+.+.++++|
T Consensus 19 ~itN~SSG~iG~aLA~~L~~~G-------~~V~li~r~~~~~-----~~---~~~~v~~i~v~s~~~m~~~l~~~~~~~D 83 (229)
T PRK06732 19 GITNHSTGQLGKIIAETFLAAG-------HEVTLVTTKTAVK-----PE---PHPNLSIIEIENVDDLLETLEPLVKDHD 83 (229)
T ss_pred eecCccchHHHHHHHHHHHhCC-------CEEEEEECccccc-----CC---CCCCeEEEEEecHHHHHHHHHHHhcCCC
Confidence 3334578999999999999998 8999988764211 00 11345565554332 245666777899
Q ss_pred EEeecCCCCC
Q 012947 91 LLLNCVGPYR 100 (452)
Q Consensus 91 vVIn~aGp~~ 100 (452)
+||||||...
T Consensus 84 ivIh~AAvsd 93 (229)
T PRK06732 84 VLIHSMAVSD 93 (229)
T ss_pred EEEeCCccCC
Confidence 9999999753
No 336
>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent. This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.
Probab=97.30 E-value=0.0021 Score=66.26 Aligned_cols=142 Identities=13% Similarity=0.035 Sum_probs=84.5
Q ss_pred CCCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEE--ecChhHHHHHHHHhCCCC-CCCccEEEEeCCCHHHH
Q 012947 6 QIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA--GRNPTRVKQALQWASPSH-SLSIPILTADTTDPPSL 82 (452)
Q Consensus 6 ~~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~ia--gR~~~kl~~l~~~l~~~~-~~~v~~v~~Dl~d~~sl 82 (452)
+..++.+|.|+||+|.+|..++-.|+..+-.+..+...+.+. +++.++++....++.... .....+... ..|
T Consensus 40 ~~~~p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~-~~~---- 114 (387)
T TIGR01757 40 SWKKTVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIG-IDP---- 114 (387)
T ss_pred cCCCCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEe-cCC----
Confidence 445689999999999999999999998763110001234444 899999988777774200 000111111 122
Q ss_pred HHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHH
Q 012947 83 HRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMF 162 (452)
Q Consensus 83 ~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~ 162 (452)
.+.++++|+||.++|.....++.=.+... .....++.+.....+.+...+++||-+ -|-|+.+|.
T Consensus 115 y~~~kdaDIVVitAG~prkpg~tR~dll~----------~N~~I~k~i~~~I~~~a~~~~iviVVs-----NPvDv~t~v 179 (387)
T TIGR01757 115 YEVFEDADWALLIGAKPRGPGMERADLLD----------INGQIFADQGKALNAVASKNCKVLVVG-----NPCNTNALI 179 (387)
T ss_pred HHHhCCCCEEEECCCCCCCCCCCHHHHHH----------HHHHHHHHHHHHHHHhCCCCeEEEEcC-----CcHHHHHHH
Confidence 46688999999999975544421111111 112334444444444443445455433 688999999
Q ss_pred Hhhhc
Q 012947 163 NSRQW 167 (452)
Q Consensus 163 ~~~~~ 167 (452)
+.+..
T Consensus 180 ~~k~s 184 (387)
T TIGR01757 180 AMKNA 184 (387)
T ss_pred HHHHc
Confidence 88776
No 337
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=97.29 E-value=0.0021 Score=66.39 Aligned_cols=95 Identities=15% Similarity=0.187 Sum_probs=71.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+++|+|| |=+|..++++|.+++. .++.++.|+.++.++++++++ +++..-+++...+..+
T Consensus 178 ~~~vlvIGA-Gem~~lva~~L~~~g~------~~i~IaNRT~erA~~La~~~~-----------~~~~~l~el~~~l~~~ 239 (414)
T COG0373 178 DKKVLVIGA-GEMGELVAKHLAEKGV------KKITIANRTLERAEELAKKLG-----------AEAVALEELLEALAEA 239 (414)
T ss_pred cCeEEEEcc-cHHHHHHHHHHHhCCC------CEEEEEcCCHHHHHHHHHHhC-----------CeeecHHHHHHhhhhC
Confidence 457999998 8899999999999984 699999999999999999873 3344557789999999
Q ss_pred cEEeecCCCC-CCCCHHHHHHHHHhCCc--EEEecC
Q 012947 90 KLLLNCVGPY-RLHGDPVAAACVHSGCD--YLDISG 122 (452)
Q Consensus 90 dvVIn~aGp~-~~~~~~vv~ac~~~g~~--yvDlsg 122 (452)
|+||.+.|.. ..-....++.+....-+ .||+.-
T Consensus 240 DvVissTsa~~~ii~~~~ve~a~~~r~~~livDiav 275 (414)
T COG0373 240 DVVISSTSAPHPIITREMVERALKIRKRLLIVDIAV 275 (414)
T ss_pred CEEEEecCCCccccCHHHHHHHHhcccCeEEEEecC
Confidence 9999987633 22233444444443332 566654
No 338
>PRK05086 malate dehydrogenase; Provisional
Probab=97.29 E-value=0.0034 Score=63.14 Aligned_cols=82 Identities=17% Similarity=0.102 Sum_probs=51.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
++|+|+||||.+|++++..|..... ....+++.+|++. .+...-++. .......+.+ .+.+++.+.++++|
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~----~~~el~L~d~~~~-~~g~alDl~--~~~~~~~i~~--~~~~d~~~~l~~~D 71 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLP----AGSELSLYDIAPV-TPGVAVDLS--HIPTAVKIKG--FSGEDPTPALEGAD 71 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCC----CccEEEEEecCCC-Ccceehhhh--cCCCCceEEE--eCCCCHHHHcCCCC
Confidence 5899999999999999998865321 1157888898754 222222221 1111223333 22345567778999
Q ss_pred EEeecCCCCCC
Q 012947 91 LLLNCVGPYRL 101 (452)
Q Consensus 91 vVIn~aGp~~~ 101 (452)
+||.|+|....
T Consensus 72 iVIitaG~~~~ 82 (312)
T PRK05086 72 VVLISAGVARK 82 (312)
T ss_pred EEEEcCCCCCC
Confidence 99999997544
No 339
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=97.28 E-value=0.00048 Score=59.67 Aligned_cols=111 Identities=21% Similarity=0.295 Sum_probs=65.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEE-EEEecChh-HHH-HHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPT-RVK-QALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v-~iagR~~~-kl~-~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
++|+|+|++|-+|+.+++.+.++.. +++ .++.|+.+ ... .+.+-.+. ....+.+ .++++++++
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~------~~lv~~v~~~~~~~~g~d~g~~~~~-~~~~~~v-------~~~l~~~~~ 66 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPG------FELVGAVDRKPSAKVGKDVGELAGI-GPLGVPV-------TDDLEELLE 66 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTT------EEEEEEEETTTSTTTTSBCHHHCTS-ST-SSBE-------BS-HHHHTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCC------cEEEEEEecCCcccccchhhhhhCc-CCccccc-------chhHHHhcc
Confidence 4799999999999999999999542 664 44566652 111 11111110 0111111 255778888
Q ss_pred CccEEeecCCCCCCCCHHHHHHHHHhCCcEEE-ecCcHHHHHHHHHHHHHHHHh
Q 012947 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLD-ISGEPEFMERMEARYHEKAVE 140 (452)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvD-lsge~~~~~~~~~~~~~~A~~ 140 (452)
.+|+||.+.-|-. ....++.|.+++++.|- .|| |..+..+..++.+++
T Consensus 67 ~~DVvIDfT~p~~--~~~~~~~~~~~g~~~ViGTTG---~~~~~~~~l~~~a~~ 115 (124)
T PF01113_consen 67 EADVVIDFTNPDA--VYDNLEYALKHGVPLVIGTTG---FSDEQIDELEELAKK 115 (124)
T ss_dssp H-SEEEEES-HHH--HHHHHHHHHHHT-EEEEE-SS---SHHHHHHHHHHHTTT
T ss_pred cCCEEEEcCChHH--hHHHHHHHHhCCCCEEEECCC---CCHHHHHHHHHHhcc
Confidence 8999999885432 25789999999998764 444 343333555665555
No 340
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.25 E-value=0.0012 Score=66.68 Aligned_cols=137 Identities=12% Similarity=0.018 Sum_probs=81.1
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh--hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~--~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
++++|.|+||+|.+|..++-.|+..+-.+.....++++.++++ ++++..+.++......-..-+.... ...+.+
T Consensus 1 ~p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~----~~~~~~ 76 (322)
T cd01338 1 KPVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITD----DPNVAF 76 (322)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEec----CcHHHh
Confidence 3679999999999999999999876631111124799999954 3465555555310000000011111 235678
Q ss_pred cCccEEeecCCCCCCCCH---HHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHH
Q 012947 87 SQTKLLLNCVGPYRLHGD---PVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFN 163 (452)
Q Consensus 87 ~~~dvVIn~aGp~~~~~~---~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~ 163 (452)
+++|+||.+||.....++ .+++.. ...++.+.....+.+...++.|+.+ -|-|+.+|.+
T Consensus 77 ~daDivvitaG~~~k~g~tR~dll~~N-------------~~i~~~i~~~i~~~~~~~~iiivvs-----NPvD~~t~~~ 138 (322)
T cd01338 77 KDADWALLVGAKPRGPGMERADLLKAN-------------GKIFTAQGKALNDVASRDVKVLVVG-----NPCNTNALIA 138 (322)
T ss_pred CCCCEEEEeCCCCCCCCCcHHHHHHHH-------------HHHHHHHHHHHHhhCCCCeEEEEec-----CcHHHHHHHH
Confidence 899999999997654442 222222 2334555454444442244444432 6889999998
Q ss_pred hhhc
Q 012947 164 SRQW 167 (452)
Q Consensus 164 ~~~~ 167 (452)
.+..
T Consensus 139 ~k~s 142 (322)
T cd01338 139 MKNA 142 (322)
T ss_pred HHHc
Confidence 8765
No 341
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=97.22 E-value=0.0023 Score=61.35 Aligned_cols=103 Identities=17% Similarity=0.228 Sum_probs=70.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-------------------hhHHHHHHHHhCC-CCCCCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASP-SHSLSI 69 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-------------------~~kl~~l~~~l~~-~~~~~v 69 (452)
+.+|+|.|+ |.+|..+++.|++.|. -++.+++.+ ..|.+.+.+.+.. ....++
T Consensus 21 ~~~VlivG~-GglGs~va~~La~~Gv------g~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i 93 (228)
T cd00757 21 NARVLVVGA-GGLGSPAAEYLAAAGV------GKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEI 93 (228)
T ss_pred CCcEEEECC-CHHHHHHHHHHHHcCC------CEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEE
Confidence 468999997 7899999999999984 356665332 2344444444432 112334
Q ss_pred cEEEEeCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEec
Q 012947 70 PILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 70 ~~v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDls 121 (452)
..+..++ +.+.+.+.++++|+||.|..... ....+.+.|.+.++.+|+..
T Consensus 94 ~~~~~~i-~~~~~~~~~~~~DvVi~~~d~~~-~r~~l~~~~~~~~ip~i~~g 143 (228)
T cd00757 94 EAYNERL-DAENAEELIAGYDLVLDCTDNFA-TRYLINDACVKLGKPLVSGA 143 (228)
T ss_pred EEeccee-CHHHHHHHHhCCCEEEEcCCCHH-HHHHHHHHHHHcCCCEEEEE
Confidence 4444455 35678888999999999987442 22457788999999888874
No 342
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=97.22 E-value=0.0026 Score=60.35 Aligned_cols=105 Identities=13% Similarity=0.122 Sum_probs=69.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh------------------hHHHHHHHHhCC-CCCCCc
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP------------------TRVKQALQWASP-SHSLSI 69 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~------------------~kl~~l~~~l~~-~~~~~v 69 (452)
+..+|+|+|+ |.+|..+++.|++.|. -++.+.+.+. .|.+.+.+.+.. ....++
T Consensus 27 ~~~~V~ViG~-GglGs~ia~~La~~Gv------g~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v 99 (212)
T PRK08644 27 KKAKVGIAGA-GGLGSNIAVALARSGV------GNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEI 99 (212)
T ss_pred hCCCEEEECc-CHHHHHHHHHHHHcCC------CeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEE
Confidence 3467999998 7899999999999984 4688877761 344444444421 112344
Q ss_pred cEEEEeCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHh-CCcEEEecC
Q 012947 70 PILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHS-GCDYLDISG 122 (452)
Q Consensus 70 ~~v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~-g~~yvDlsg 122 (452)
..+...+++ +.+.+.++++|+||.|...+.. ...+.+.|.+. ++.+|..++
T Consensus 100 ~~~~~~i~~-~~~~~~~~~~DvVI~a~D~~~~-r~~l~~~~~~~~~~p~I~~~~ 151 (212)
T PRK08644 100 EAHNEKIDE-DNIEELFKDCDIVVEAFDNAET-KAMLVETVLEHPGKKLVAASG 151 (212)
T ss_pred EEEeeecCH-HHHHHHHcCCCEEEECCCCHHH-HHHHHHHHHHhCCCCEEEeeh
Confidence 444445544 5677888999999999643321 23566778777 777776654
No 343
>TIGR01921 DAP-DH diaminopimelate dehydrogenase. This model represents the diaminopimelate dehydrogenase enzyme which provides an alternate (shortcut) route of lysine buiosynthesis in Corynebacterium, Bacterioides, Porphyromonas and scattered other species. The enzyme from Corynebacterium glutamicum has been crystallized and characterized.
Probab=97.21 E-value=0.007 Score=60.86 Aligned_cols=121 Identities=17% Similarity=0.212 Sum_probs=77.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEE-EEecCh-hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLA-LAGRNP-TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~-iagR~~-~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
+++|.|+|. |.+|+.+++.+.++.. .+++ +.+|+. +++. +. +... ...| ...+..
T Consensus 3 kIRVgIVG~-GnIGr~~a~al~~~pd------~ELVgV~dr~~~~~~~---~~--------~~v~--~~~d---~~e~l~ 59 (324)
T TIGR01921 3 KIRAAIVGY-GNLGRSVEKAIQQQPD------MELVGVFSRRGAETLD---TE--------TPVY--AVAD---DEKHLD 59 (324)
T ss_pred CcEEEEEee-cHHHHHHHHHHHhCCC------cEEEEEEcCCcHHHHh---hc--------CCcc--ccCC---HHHhcc
Confidence 489999997 9999999999887642 5654 567774 3332 11 1111 1223 333457
Q ss_pred CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcch
Q 012947 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIP 155 (452)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P 155 (452)
++|+|+.|.+.. .+ .+.+..++++|.|.||......-+.+.....++.|++.|..-+.++|+|+.-
T Consensus 60 ~iDVViIctPs~-th-~~~~~~~L~aG~NVV~s~~~h~~~p~~~~~ld~AAk~~g~vsvi~~GwDPG~ 125 (324)
T TIGR01921 60 DVDVLILCMGSA-TD-IPEQAPYFAQFANTVDSFDNHRDIPRHRQVMDAAAKAAGNVSVISTGWDPGM 125 (324)
T ss_pred CCCEEEEcCCCc-cC-HHHHHHHHHcCCCEEECCCcccCCHHHHHHHHHHHHHcCCEEEEECCCCcCh
Confidence 899999997543 33 6888889999999999864211112334556777887544444447887664
No 344
>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.
Probab=97.20 E-value=0.00071 Score=68.79 Aligned_cols=96 Identities=16% Similarity=0.169 Sum_probs=66.0
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCccE
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~dv 91 (452)
+|.|+||||++|+.+++.|.+++. +..++.++.++.+..+.+. + ........|++ . ..++++|+
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~h----p~~~l~~~as~~~~g~~~~--~-----~~~~~~~~~~~-~----~~~~~~D~ 64 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNF----PIDKLVLLASDRSAGRKVT--F-----KGKELEVNEAK-I----ESFEGIDI 64 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCC----ChhhEEEEeccccCCCeee--e-----CCeeEEEEeCC-h----HHhcCCCE
Confidence 478999999999999999998652 2256666666544332221 1 12456666764 1 23478999
Q ss_pred EeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHH
Q 012947 92 LLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPE 125 (452)
Q Consensus 92 VIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~ 125 (452)
||-|+|.. ....++....+.|+..||+++.+.
T Consensus 65 v~~a~g~~--~s~~~a~~~~~~G~~VID~ss~~R 96 (339)
T TIGR01296 65 ALFSAGGS--VSKEFAPKAAKCGAIVIDNTSAFR 96 (339)
T ss_pred EEECCCHH--HHHHHHHHHHHCCCEEEECCHHHh
Confidence 99999754 335677777788999999997543
No 345
>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]
Probab=97.20 E-value=0.0023 Score=66.97 Aligned_cols=86 Identities=16% Similarity=0.297 Sum_probs=59.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChh---HHHHH--------HHHhCC---CCCCCccEEEEe
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPT---RVKQA--------LQWASP---SHSLSIPILTAD 75 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~---kl~~l--------~~~l~~---~~~~~v~~v~~D 75 (452)
...|+|||||||+|+-+++.|++..|. ..++.+.-|... .-+++ -+.+.. ....++..+.+|
T Consensus 12 ~k~i~vTG~tGFlgKVliEklLr~~p~----v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GD 87 (467)
T KOG1221|consen 12 NKTIFVTGATGFLGKVLIEKLLRTTPD----VKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGD 87 (467)
T ss_pred CCeEEEEcccchhHHHHHHHHHhcCcC----cceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccc
Confidence 457999999999999999999998752 247778777532 11112 122211 123467788888
Q ss_pred CCCH------HHHHHHHcCccEEeecCCCC
Q 012947 76 TTDP------PSLHRLCSQTKLLLNCVGPY 99 (452)
Q Consensus 76 l~d~------~sl~~~~~~~dvVIn~aGp~ 99 (452)
+.++ .+++.+.+++|+|||+|+-.
T Consensus 88 i~~~~LGis~~D~~~l~~eV~ivih~AAtv 117 (467)
T KOG1221|consen 88 ISEPDLGISESDLRTLADEVNIVIHSAATV 117 (467)
T ss_pred ccCcccCCChHHHHHHHhcCCEEEEeeeee
Confidence 8754 55667888999999999753
No 346
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=97.19 E-value=0.0032 Score=63.21 Aligned_cols=73 Identities=15% Similarity=0.189 Sum_probs=57.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
...+|+|+|+ |-+|+.+++.|...+. .+|.+++|+.++.+++.++++ . ..+ +.+++.+.+.+
T Consensus 177 ~~~~V~ViGa-G~iG~~~a~~L~~~g~------~~V~v~~r~~~ra~~la~~~g----~--~~~-----~~~~~~~~l~~ 238 (311)
T cd05213 177 KGKKVLVIGA-GEMGELAAKHLAAKGV------AEITIANRTYERAEELAKELG----G--NAV-----PLDELLELLNE 238 (311)
T ss_pred cCCEEEEECc-HHHHHHHHHHHHHcCC------CEEEEEeCCHHHHHHHHHHcC----C--eEE-----eHHHHHHHHhc
Confidence 3578999998 9999999999988662 589999999999988888763 1 211 23467788889
Q ss_pred ccEEeecCCCC
Q 012947 89 TKLLLNCVGPY 99 (452)
Q Consensus 89 ~dvVIn~aGp~ 99 (452)
+|+||.+.+..
T Consensus 239 aDvVi~at~~~ 249 (311)
T cd05213 239 ADVVISATGAP 249 (311)
T ss_pred CCEEEECCCCC
Confidence 99999999754
No 347
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=97.19 E-value=0.002 Score=66.43 Aligned_cols=103 Identities=15% Similarity=0.179 Sum_probs=72.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-------------------hhHHHHHHHHhCC-CCCCCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASP-SHSLSI 69 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-------------------~~kl~~l~~~l~~-~~~~~v 69 (452)
..+|+|+|+ |.+|..+++.|++.|. -++.+++++ ..|.+.+.+.+.. ....++
T Consensus 135 ~~~VlvvG~-GG~Gs~ia~~La~~Gv------g~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v 207 (376)
T PRK08762 135 EARVLLIGA-GGLGSPAALYLAAAGV------GTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQV 207 (376)
T ss_pred cCcEEEECC-CHHHHHHHHHHHHcCC------CeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEE
Confidence 467999987 7799999999999994 478888887 4566665555532 111223
Q ss_pred cEEEEeCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEec
Q 012947 70 PILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 70 ~~v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDls 121 (452)
..+...++ .+.+.+++++.|+||+|...+.. ...+.++|.+.++.+|+..
T Consensus 208 ~~~~~~~~-~~~~~~~~~~~D~Vv~~~d~~~~-r~~ln~~~~~~~ip~i~~~ 257 (376)
T PRK08762 208 EAVQERVT-SDNVEALLQDVDVVVDGADNFPT-RYLLNDACVKLGKPLVYGA 257 (376)
T ss_pred EEEeccCC-hHHHHHHHhCCCEEEECCCCHHH-HHHHHHHHHHcCCCEEEEE
Confidence 33333343 46778889999999999865432 2457789999999988764
No 348
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=97.19 E-value=0.0013 Score=66.96 Aligned_cols=98 Identities=15% Similarity=0.067 Sum_probs=63.3
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEe--cChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 012947 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAG--RNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 8 ~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iag--R~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
.++++|.|+||||++|+.+++.|.+++.+ ..++..+. |+..+.-.. .......-+++ ++ .
T Consensus 5 ~~~~kVaVvGAtG~vG~eLlrlL~~~~hP----~~~l~~las~rsaGk~~~~---------~~~~~~v~~~~-~~----~ 66 (344)
T PLN02383 5 ENGPSVAIVGVTGAVGQEFLSVLTDRDFP----YSSLKMLASARSAGKKVTF---------EGRDYTVEELT-ED----S 66 (344)
T ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCC----cceEEEEEccCCCCCeeee---------cCceeEEEeCC-HH----H
Confidence 35689999999999999999999986521 13443332 333322111 11233333443 22 3
Q ss_pred HcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHH
Q 012947 86 CSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPE 125 (452)
Q Consensus 86 ~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~ 125 (452)
++++|+||.++|.- ....++....+.|+..||+++...
T Consensus 67 ~~~~D~vf~a~p~~--~s~~~~~~~~~~g~~VIDlS~~fR 104 (344)
T PLN02383 67 FDGVDIALFSAGGS--ISKKFGPIAVDKGAVVVDNSSAFR 104 (344)
T ss_pred HcCCCEEEECCCcH--HHHHHHHHHHhCCCEEEECCchhh
Confidence 46899999998632 336677777788999999998653
No 349
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=97.18 E-value=0.0022 Score=67.41 Aligned_cols=91 Identities=14% Similarity=0.236 Sum_probs=71.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-HcCc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~-~~~~ 89 (452)
++|+|+|+ |.+|+.+++.|.+.+ .++.+++|++++++++.+. ..+.++.+|.++++.++++ ++++
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g-------~~v~vid~~~~~~~~~~~~------~~~~~~~gd~~~~~~l~~~~~~~a 66 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGEN-------NDVTVIDTDEERLRRLQDR------LDVRTVVGNGSSPDVLREAGAEDA 66 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC-------CcEEEEECCHHHHHHHHhh------cCEEEEEeCCCCHHHHHHcCCCcC
Confidence 47999998 999999999999987 7899999999998776542 2468889999999999988 8899
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHh-CCc
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHS-GCD 116 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~-g~~ 116 (452)
|.||.+.+-. .....+...|.+. +..
T Consensus 67 ~~vi~~~~~~-~~n~~~~~~~r~~~~~~ 93 (453)
T PRK09496 67 DLLIAVTDSD-ETNMVACQIAKSLFGAP 93 (453)
T ss_pred CEEEEecCCh-HHHHHHHHHHHHhcCCC
Confidence 9999887532 2223344556554 554
No 350
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.18 E-value=0.0026 Score=66.91 Aligned_cols=90 Identities=18% Similarity=0.234 Sum_probs=66.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh-hHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-TRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~-~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
..+++|+|+++ +|..+++.|++.| ++|.+.+++. +.+++..+++. ...+.++..|..+ +...+
T Consensus 5 ~k~v~iiG~g~-~G~~~A~~l~~~G-------~~V~~~d~~~~~~~~~~~~~l~---~~~~~~~~~~~~~-----~~~~~ 68 (450)
T PRK14106 5 GKKVLVVGAGV-SGLALAKFLKKLG-------AKVILTDEKEEDQLKEALEELG---ELGIELVLGEYPE-----EFLEG 68 (450)
T ss_pred CCEEEEECCCH-HHHHHHHHHHHCC-------CEEEEEeCCchHHHHHHHHHHH---hcCCEEEeCCcch-----hHhhc
Confidence 46899999977 9999999999999 8999999975 45555555552 1246677777765 34567
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhCCcE
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDY 117 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g~~y 117 (452)
+|+||+++|.. ...+++.+|.+.|+..
T Consensus 69 ~d~vv~~~g~~--~~~~~~~~a~~~~i~~ 95 (450)
T PRK14106 69 VDLVVVSPGVP--LDSPPVVQAHKKGIEV 95 (450)
T ss_pred CCEEEECCCCC--CCCHHHHHHHHCCCcE
Confidence 99999999864 2346777777766543
No 351
>PRK05442 malate dehydrogenase; Provisional
Probab=97.18 E-value=0.0019 Score=65.23 Aligned_cols=138 Identities=13% Similarity=0.036 Sum_probs=79.4
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh--hHHHHHHHHhCC---CCCCCccEEEEeCCCHHHH
Q 012947 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASP---SHSLSIPILTADTTDPPSL 82 (452)
Q Consensus 8 ~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~--~kl~~l~~~l~~---~~~~~v~~v~~Dl~d~~sl 82 (452)
.++.+|.|+||+|.+|..++-.|+..+-.+.....++.+.++++ ++++....++.. +...++. + . ...
T Consensus 2 ~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~-i----~--~~~ 74 (326)
T PRK05442 2 KAPVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVV-I----T--DDP 74 (326)
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcE-E----e--cCh
Confidence 46779999999999999999988876521100113799999854 445555544431 0001121 1 1 123
Q ss_pred HHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHH
Q 012947 83 HRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMF 162 (452)
Q Consensus 83 ~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~ 162 (452)
.+.++++|+||-+||.....++.=.+.... ....++.+.....+.+...++.|+-+ -|-|+.+|.
T Consensus 75 y~~~~daDiVVitaG~~~k~g~tR~dll~~----------Na~i~~~i~~~i~~~~~~~~iiivvs-----NPvDv~t~v 139 (326)
T PRK05442 75 NVAFKDADVALLVGARPRGPGMERKDLLEA----------NGAIFTAQGKALNEVAARDVKVLVVG-----NPANTNALI 139 (326)
T ss_pred HHHhCCCCEEEEeCCCCCCCCCcHHHHHHH----------HHHHHHHHHHHHHHhCCCCeEEEEeC-----CchHHHHHH
Confidence 567889999999999655444211111111 12234444443333332344444433 688999999
Q ss_pred Hhhhc
Q 012947 163 NSRQW 167 (452)
Q Consensus 163 ~~~~~ 167 (452)
+.+..
T Consensus 140 ~~k~s 144 (326)
T PRK05442 140 AMKNA 144 (326)
T ss_pred HHHHc
Confidence 88765
No 352
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=97.17 E-value=0.002 Score=63.42 Aligned_cols=123 Identities=15% Similarity=0.101 Sum_probs=79.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
.+++|+|| |+.+++++-.|++.+. .++.|+.|+.++.+++.+.+. . +.. +.+. ..++|
T Consensus 123 ~~vlilGa-GGaarAi~~aL~~~g~------~~i~i~nR~~~~a~~la~~~~------~-----~~~--~~~~--~~~~d 180 (272)
T PRK12550 123 LVVALRGS-GGMAKAVAAALRDAGF------TDGTIVARNEKTGKALAELYG------Y-----EWR--PDLG--GIEAD 180 (272)
T ss_pred CeEEEECC-cHHHHHHHHHHHHCCC------CEEEEEeCCHHHHHHHHHHhC------C-----cch--hhcc--cccCC
Confidence 47999997 8899999999999883 479999999999988887652 1 111 1111 24589
Q ss_pred EEeecCCCCCCC-----CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhh
Q 012947 91 LLLNCVGPYRLH-----GDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSR 165 (452)
Q Consensus 91 vVIn~aGp~~~~-----~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~ 165 (452)
+||||....... ..++-...+....-.+|+...+.-+. +-+.|++.|..++++. +|..+-+..
T Consensus 181 lvINaTp~Gm~~~~~~~~~pi~~~~l~~~~~v~D~vY~P~~T~-----ll~~A~~~G~~~i~Gl-------~MLi~Qa~~ 248 (272)
T PRK12550 181 ILVNVTPIGMAGGPEADKLAFPEAEIDAASVVFDVVALPAETP-----LIRYARARGKTVITGA-------EVIALQAVE 248 (272)
T ss_pred EEEECCccccCCCCccccCCCCHHHcCCCCEEEEeecCCccCH-----HHHHHHHCcCeEeCCH-------HHHHHHHHH
Confidence 999996322111 11333333444556788887654322 3356788898887553 455555555
Q ss_pred hc
Q 012947 166 QW 167 (452)
Q Consensus 166 ~~ 167 (452)
.+
T Consensus 249 ~f 250 (272)
T PRK12550 249 QF 250 (272)
T ss_pred HH
Confidence 44
No 353
>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]
Probab=97.17 E-value=0.0039 Score=60.33 Aligned_cols=218 Identities=18% Similarity=0.143 Sum_probs=111.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEE-EEEecChhHH-HHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRV-KQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v-~iagR~~~kl-~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
.++|.|.||+|-+|+.+++.+.+... +++ ....|..+.. ..-..++. ....+.+. +.| ++.....
T Consensus 2 ~iki~V~Ga~GRMG~~ii~~v~~~~~------~~L~aa~~~~~~~~~g~d~ge~~--g~~~~gv~---v~~--~~~~~~~ 68 (266)
T COG0289 2 MIKVAVAGASGRMGRTLIRAVLEAPD------LELVAAFDRPGSLSLGSDAGELA--GLGLLGVP---VTD--DLLLVKA 68 (266)
T ss_pred CceEEEEcCCChHHHHHHHHHhcCCC------ceEEEEEecCCccccccchhhhc--cccccCce---eec--chhhccc
Confidence 37899999999999999999987752 454 4456654322 00001110 00112222 112 1556667
Q ss_pred CccEEeecCCCCCCCCHHHHHHHHHhCCc-EEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHH---HH
Q 012947 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCD-YLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVM---FN 163 (452)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~ac~~~g~~-yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~---~~ 163 (452)
++||||...-|-. ....++.|.++++. .|=.|| |..+-.+.+.+.+++-++.+ +.-| |+=-.+... .+
T Consensus 69 ~~DV~IDFT~P~~--~~~~l~~~~~~~~~lVIGTTG---f~~e~~~~l~~~a~~v~vv~--a~Nf-SiGvnll~~l~~~a 140 (266)
T COG0289 69 DADVLIDFTTPEA--TLENLEFALEHGKPLVIGTTG---FTEEQLEKLREAAEKVPVVI--APNF-SLGVNLLFKLAEQA 140 (266)
T ss_pred CCCEEEECCCchh--hHHHHHHHHHcCCCeEEECCC---CCHHHHHHHHHHHhhCCEEE--eccc-hHHHHHHHHHHHHH
Confidence 8999999987743 36789999999986 555555 44444455666666644333 3333 221122222 23
Q ss_pred hhhcCCCCCcceEEEEEEec-cCCccccccccHHHHHHhHhcchhhHHHHhcCCCCCCCCCCCCCCCC---CCccccccc
Q 012947 164 SRQWIPPAVPNQIEAYVSLE-SDKRIVGNFGTYESAVLGVANAQELQKLRRSRPRRARPVIPGPAPLR---GPLVESQKR 239 (452)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~GT~~S~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 239 (452)
++.|. .++.+-+|+-.+-+ ..++ ||.-.+...+++... ..+.+. .-+.+....+++.+. ...++-...
T Consensus 141 ak~l~-~~DiEIiE~HHr~K~DAPS-----GTAl~lae~ia~~~~-~~~~~~-~v~~r~G~~g~r~~~~Igi~svR~G~i 212 (266)
T COG0289 141 AKVLD-DYDIEIIEAHHRHKKDAPS-----GTALKLAEAIAEARG-QDLKDE-AVYGREGATGARKEGEIGIHSVRGGDI 212 (266)
T ss_pred HHhcC-CCCEEehhhhcccCCCCCc-----HHHHHHHHHHHHhhc-cccccc-eeecccCCcCCCCCCCceeEEeecCCc
Confidence 34443 33444455433322 2222 777765555554321 000000 001111111221110 112344455
Q ss_pred cCeEEEeCCCCchhhhh
Q 012947 240 IGLWAIKLPSADATVVR 256 (452)
Q Consensus 240 ~~~~~~~f~~~d~~vV~ 256 (452)
.+...+-|.+.+++|.-
T Consensus 213 vG~H~V~F~~~GE~iei 229 (266)
T COG0289 213 VGEHEVIFAGEGERIEI 229 (266)
T ss_pred ceeEEEEEecCCcEEEE
Confidence 67788888877777643
No 354
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=97.16 E-value=0.0041 Score=54.91 Aligned_cols=103 Identities=13% Similarity=0.231 Sum_probs=68.7
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-------------------hhHHHHHHHHhCC-CCCCCccE
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASP-SHSLSIPI 71 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-------------------~~kl~~l~~~l~~-~~~~~v~~ 71 (452)
+|+|+|+ |.+|..+++.|++.|. -++.+++.+ ..|.+.+.+.+.. ....++..
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv------~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~ 73 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGV------GKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTA 73 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCC------CEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEE
Confidence 4899998 8899999999999983 367777644 1234444444322 11223344
Q ss_pred EEEeCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCc
Q 012947 72 LTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGE 123 (452)
Q Consensus 72 v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge 123 (452)
+..++.+ +...+.+++.|+||.|...+. ....+.+.|.+.++.+|+....
T Consensus 74 ~~~~~~~-~~~~~~~~~~diVi~~~d~~~-~~~~l~~~~~~~~i~~i~~~~~ 123 (143)
T cd01483 74 VPEGISE-DNLDDFLDGVDLVIDAIDNIA-VRRALNRACKELGIPVIDAGGL 123 (143)
T ss_pred EeeecCh-hhHHHHhcCCCEEEECCCCHH-HHHHHHHHHHHcCCCEEEEcCC
Confidence 4444443 334677889999999987532 2356788999999998887653
No 355
>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=97.15 E-value=0.0016 Score=66.55 Aligned_cols=103 Identities=14% Similarity=0.135 Sum_probs=64.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC-C----CCCCccEEEEeCCCHHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-S----HSLSIPILTADTTDPPSLHR 84 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~-~----~~~~v~~v~~Dl~d~~sl~~ 84 (452)
.++|.|+||||++|+.+++.|.++.. .++..+.++.++..+....+-. . ......-+.+...+++.
T Consensus 3 ~~~V~I~GatG~iG~~l~~~L~~~p~------~el~~~~~s~~~~G~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--- 73 (349)
T PRK08664 3 KLKVGILGATGMVGQRFVQLLANHPW------FEVTALAASERSAGKTYGEAVRWQLDGPIPEEVADMEVVSTDPEA--- 73 (349)
T ss_pred CcEEEEECCCCHHHHHHHHHHHcCCC------ceEEEEEcChhhcCCcccccccccccccccccccceEEEeCCHHH---
Confidence 37899999999999999999997652 6777776665443222211100 0 00001112222234443
Q ss_pred HHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcH
Q 012947 85 LCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEP 124 (452)
Q Consensus 85 ~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~ 124 (452)
+.++|+|+.+.+.. ....+++.+.+.|+..||++++.
T Consensus 74 -~~~~DvVf~a~p~~--~s~~~~~~~~~~G~~vIDls~~f 110 (349)
T PRK08664 74 -VDDVDIVFSALPSD--VAGEVEEEFAKAGKPVFSNASAH 110 (349)
T ss_pred -hcCCCEEEEeCChh--HHHHHHHHHHHCCCEEEECCchh
Confidence 35899999887532 23567788888999999999854
No 356
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=97.11 E-value=0.0062 Score=49.66 Aligned_cols=91 Identities=15% Similarity=0.217 Sum_probs=60.9
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEE-ecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~ia-gR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
+|.|+| +|.+|..+++.|++.+. ...++.+. .|++++++++.+++. +.+... +..++++.+|
T Consensus 1 kI~iIG-~G~mg~al~~~l~~~g~----~~~~v~~~~~r~~~~~~~~~~~~~------~~~~~~------~~~~~~~~ad 63 (96)
T PF03807_consen 1 KIGIIG-AGNMGSALARGLLASGI----KPHEVIIVSSRSPEKAAELAKEYG------VQATAD------DNEEAAQEAD 63 (96)
T ss_dssp EEEEES-TSHHHHHHHHHHHHTTS-----GGEEEEEEESSHHHHHHHHHHCT------TEEESE------EHHHHHHHTS
T ss_pred CEEEEC-CCHHHHHHHHHHHHCCC----CceeEEeeccCcHHHHHHHHHhhc------cccccC------ChHHhhccCC
Confidence 577885 59999999999999972 11688855 999999999988762 222221 2456667899
Q ss_pred EEeecCCCCCCCCHHHHHHH--HHhCCcEEEec
Q 012947 91 LLLNCVGPYRLHGDPVAAAC--VHSGCDYLDIS 121 (452)
Q Consensus 91 vVIn~aGp~~~~~~~vv~ac--~~~g~~yvDls 121 (452)
+||.|+-|... ..+++.. ...+..+||+.
T Consensus 64 vvilav~p~~~--~~v~~~i~~~~~~~~vis~~ 94 (96)
T PF03807_consen 64 VVILAVKPQQL--PEVLSEIPHLLKGKLVISIA 94 (96)
T ss_dssp EEEE-S-GGGH--HHHHHHHHHHHTTSEEEEES
T ss_pred EEEEEECHHHH--HHHHHHHhhccCCCEEEEeC
Confidence 99999966543 2344333 44556677764
No 357
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=97.11 E-value=0.0062 Score=61.02 Aligned_cols=127 Identities=16% Similarity=0.201 Sum_probs=78.7
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC--C-CCCCccEEEEeCCCHHHHHHHHcC
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--S-HSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~--~-~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
+|.|+|+ |.+|+.++..|+..+.. .++.+.+|+.++++.+..++.. . ......+. ..+.+ .+++
T Consensus 2 kI~IIGa-G~vG~~~a~~l~~~g~~-----~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~---~~~~~----~l~~ 68 (306)
T cd05291 2 KVVIIGA-GHVGSSFAYSLVNQGIA-----DELVLIDINEEKAEGEALDLEDALAFLPSPVKIK---AGDYS----DCKD 68 (306)
T ss_pred EEEEECC-CHHHHHHHHHHHhcCCC-----CEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE---cCCHH----HhCC
Confidence 6899997 89999999999988731 3899999999998888776632 0 01111222 22322 3689
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhc
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQW 167 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~ 167 (452)
+|+||+++|.....++.=.+.... ....++.+.....+.+. .++.|+- +-|-|+.++.+.+..
T Consensus 69 aDIVIitag~~~~~g~~R~dll~~----------N~~i~~~~~~~i~~~~~-~~~vivv-----sNP~d~~~~~~~~~~ 131 (306)
T cd05291 69 ADIVVITAGAPQKPGETRLDLLEK----------NAKIMKSIVPKIKASGF-DGIFLVA-----SNPVDVITYVVQKLS 131 (306)
T ss_pred CCEEEEccCCCCCCCCCHHHHHHH----------HHHHHHHHHHHHHHhCC-CeEEEEe-----cChHHHHHHHHHHHh
Confidence 999999999654443211111111 23344554444444333 3333332 368899999888863
No 358
>PRK08223 hypothetical protein; Validated
Probab=97.10 E-value=0.0029 Score=62.56 Aligned_cols=104 Identities=14% Similarity=0.123 Sum_probs=68.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-------------------hhHHHHHHHHhCC-CCCCC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASP-SHSLS 68 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-------------------~~kl~~l~~~l~~-~~~~~ 68 (452)
++-+|+|.|+ |++|..++++|++.|. -++.+++.+ ..|.+.+.+.+.. ....+
T Consensus 26 ~~s~VlIvG~-GGLGs~va~~LA~aGV------G~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~ 98 (287)
T PRK08223 26 RNSRVAIAGL-GGVGGIHLLTLARLGI------GKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELE 98 (287)
T ss_pred hcCCEEEECC-CHHHHHHHHHHHHhCC------CeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCE
Confidence 3467999998 7789999999999984 466666654 1233333333321 11233
Q ss_pred ccEEEEeCCCHHHHHHHHcCccEEeecCCCCC-CCCHHHHHHHHHhCCcEEEe
Q 012947 69 IPILTADTTDPPSLHRLCSQTKLLLNCVGPYR-LHGDPVAAACVHSGCDYLDI 120 (452)
Q Consensus 69 v~~v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~-~~~~~vv~ac~~~g~~yvDl 120 (452)
+..+...++ ++.+.++++++|+||++.-.+. ..-..+.++|.+.++.+|..
T Consensus 99 V~~~~~~l~-~~n~~~ll~~~DlVvD~~D~~~~~~r~~ln~~c~~~~iP~V~~ 150 (287)
T PRK08223 99 IRAFPEGIG-KENADAFLDGVDVYVDGLDFFEFDARRLVFAACQQRGIPALTA 150 (287)
T ss_pred EEEEecccC-ccCHHHHHhCCCEEEECCCCCcHHHHHHHHHHHHHcCCCEEEE
Confidence 444444454 4567888999999999875431 12256778999998888765
No 359
>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form. This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.
Probab=97.09 E-value=0.00082 Score=67.04 Aligned_cols=83 Identities=14% Similarity=0.122 Sum_probs=58.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
++|.|.|||||+|..+++.|.++.. .++..+.-+.. + +..+ .+++++++|
T Consensus 2 ~~v~IvGasGy~G~el~rlL~~HP~------~el~~l~s~~~--------~-------------~~~~---~~~~~~~~D 51 (310)
T TIGR01851 2 PKVFIDGEAGTTGLQIRERLSGRDD------IELLSIAPDRR--------K-------------DAAE---RAKLLNAAD 51 (310)
T ss_pred CeEEEECCCChhHHHHHHHHhCCCC------eEEEEEecccc--------c-------------CcCC---HhHhhcCCC
Confidence 6899999999999999999999863 56554432211 1 0111 345667899
Q ss_pred EEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHH
Q 012947 91 LLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPE 125 (452)
Q Consensus 91 vVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~ 125 (452)
+||.+++.- ....++....+.|+..||+++...
T Consensus 52 ~vFlalp~~--~s~~~~~~~~~~g~~VIDlSadfR 84 (310)
T TIGR01851 52 VAILCLPDD--AAREAVSLVDNPNTCIIDASTAYR 84 (310)
T ss_pred EEEECCCHH--HHHHHHHHHHhCCCEEEECChHHh
Confidence 999988422 235667777788999999998653
No 360
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=97.09 E-value=0.0044 Score=56.88 Aligned_cols=100 Identities=13% Similarity=0.078 Sum_probs=61.3
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh------------------hHHHHHHHHhCC-CCCCCccEE
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP------------------TRVKQALQWASP-SHSLSIPIL 72 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~------------------~kl~~l~~~l~~-~~~~~v~~v 72 (452)
+|+|+|+ |.+|..+++.|++.|. -++.+.+.+. .|.+.+.+.+.. ....++..+
T Consensus 1 ~VlViG~-GglGs~ia~~La~~Gv------g~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~ 73 (174)
T cd01487 1 KVGIAGA-GGLGSNIAVLLARSGV------GNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAI 73 (174)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCC------CeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEE
Confidence 4899997 7899999999999983 4688888764 233333333321 112234444
Q ss_pred EEeCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHh-CCcEEEe
Q 012947 73 TADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHS-GCDYLDI 120 (452)
Q Consensus 73 ~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~-g~~yvDl 120 (452)
...++ .+.+.+.++++|+||.|....... ..+.+.|.+. ++.+|.-
T Consensus 74 ~~~~~-~~~~~~~l~~~DlVi~~~d~~~~r-~~i~~~~~~~~~ip~i~~ 120 (174)
T cd01487 74 NIKID-ENNLEGLFGDCDIVVEAFDNAETK-AMLAESLLGNKNKPVVCA 120 (174)
T ss_pred EeecC-hhhHHHHhcCCCEEEECCCCHHHH-HHHHHHHHHHCCCCEEEE
Confidence 44454 366778888999999886432211 2344555554 5555543
No 361
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=97.08 E-value=0.002 Score=66.88 Aligned_cols=73 Identities=14% Similarity=0.112 Sum_probs=57.7
Q ss_pred CCCeEEEEcC----------------CchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEE
Q 012947 9 ELFDVIILGA----------------SGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPIL 72 (452)
Q Consensus 9 ~~~~ilV~GA----------------TG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v 72 (452)
+..+++|+|| ||.+|.+++++|+++| ++|.+++++.+ ++ . .. .+.
T Consensus 187 ~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~G-------a~V~~v~~~~~-~~-----~----~~--~~~ 247 (399)
T PRK05579 187 AGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRG-------ADVTLVSGPVN-LP-----T----PA--GVK 247 (399)
T ss_pred CCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCC-------CEEEEeCCCcc-cc-----C----CC--CcE
Confidence 3468999999 8999999999999999 89999998762 21 1 11 245
Q ss_pred EEeCCCHHHHHHHHc----CccEEeecCCCCC
Q 012947 73 TADTTDPPSLHRLCS----QTKLLLNCVGPYR 100 (452)
Q Consensus 73 ~~Dl~d~~sl~~~~~----~~dvVIn~aGp~~ 100 (452)
.+|+++.+++.+.+. +.|++|||||...
T Consensus 248 ~~dv~~~~~~~~~v~~~~~~~DilI~~Aav~d 279 (399)
T PRK05579 248 RIDVESAQEMLDAVLAALPQADIFIMAAAVAD 279 (399)
T ss_pred EEccCCHHHHHHHHHHhcCCCCEEEEcccccc
Confidence 679999888877764 5899999999743
No 362
>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.
Probab=97.07 E-value=0.0022 Score=65.24 Aligned_cols=102 Identities=15% Similarity=0.166 Sum_probs=61.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh-hHHHHHHHHhCC--C--CCCCcc-EEEEeCCCHHHHHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-TRVKQALQWASP--S--HSLSIP-ILTADTTDPPSLHR 84 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~-~kl~~l~~~l~~--~--~~~~v~-~v~~Dl~d~~sl~~ 84 (452)
++|.|+||||++|+.+++.|..+.. .++..+.++. +..+.+.+.... . ....+. ...-++ +++
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~~~------~~l~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---- 69 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKHPY------FELAKVVASPRSAGKRYGEAVKWIEPGDMPEYVRDLPIVEP-EPV---- 69 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC------ceEEEEEEChhhcCCcchhhccccccCCCccccceeEEEeC-CHH----
Confidence 4799999999999999999988752 5666553333 221111111100 0 000011 111122 222
Q ss_pred HHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHH
Q 012947 85 LCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPE 125 (452)
Q Consensus 85 ~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~ 125 (452)
...++|+|+.+.+.. ....+++.+.+.|++.||++|+..
T Consensus 70 ~~~~~DvVf~a~p~~--~s~~~~~~~~~~G~~VIDlsg~fR 108 (341)
T TIGR00978 70 ASKDVDIVFSALPSE--VAEEVEPKLAEAGKPVFSNASNHR 108 (341)
T ss_pred HhccCCEEEEeCCHH--HHHHHHHHHHHCCCEEEECChhhc
Confidence 346899999998543 225677888899999999998743
No 363
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=97.06 E-value=0.0028 Score=68.23 Aligned_cols=127 Identities=19% Similarity=0.164 Sum_probs=82.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH-HHcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHR-LCSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~-~~~~ 88 (452)
..+++|+|| |++|+.++..|++.| .+|.++.|+.++++++.+++. . .. .+..+ +.+ ....
T Consensus 379 ~k~vlIlGa-GGagrAia~~L~~~G-------~~V~i~nR~~e~a~~la~~l~----~--~~--~~~~~---~~~~~~~~ 439 (529)
T PLN02520 379 GKLFVVIGA-GGAGKALAYGAKEKG-------ARVVIANRTYERAKELADAVG----G--QA--LTLAD---LENFHPEE 439 (529)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCC-------CEEEEEcCCHHHHHHHHHHhC----C--ce--eeHhH---hhhhcccc
Confidence 457999999 799999999999998 789999999999988887652 1 11 12222 222 2235
Q ss_pred ccEEeecCCCCCCC---CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhh
Q 012947 89 TKLLLNCVGPYRLH---GDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSR 165 (452)
Q Consensus 89 ~dvVIn~aGp~~~~---~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~ 165 (452)
.|+||||...-... ..++-...+....-.+|+...+.-+. +-+.|++.|+.++++. +|.++-+..
T Consensus 440 ~diiINtT~vGm~~~~~~~pl~~~~l~~~~~v~D~vY~P~~T~-----ll~~A~~~G~~~~~Gl-------~MLv~Qa~~ 507 (529)
T PLN02520 440 GMILANTTSVGMQPNVDETPISKHALKHYSLVFDAVYTPKITR-----LLREAEESGAIIVSGT-------EMFIRQAYE 507 (529)
T ss_pred CeEEEecccCCCCCCCCCCcccHhhCCCCCEEEEeccCCCcCH-----HHHHHHHCCCeEeCcH-------HHHHHHHHH
Confidence 79999987543221 12333333444556889887664322 3356777888777553 455555555
Q ss_pred hc
Q 012947 166 QW 167 (452)
Q Consensus 166 ~~ 167 (452)
++
T Consensus 508 ~f 509 (529)
T PLN02520 508 QF 509 (529)
T ss_pred HH
Confidence 44
No 364
>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]
Probab=97.05 E-value=0.0077 Score=56.89 Aligned_cols=116 Identities=17% Similarity=0.226 Sum_probs=77.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
++|.|+|. |.||+.+++.+... +-+ .-.+++.+|+.+|..++.+.+.. ++. .++++++...|
T Consensus 1 l~vgiVGc-GaIG~~l~e~v~~~-~~~---~e~v~v~D~~~ek~~~~~~~~~~----------~~~---s~ide~~~~~D 62 (255)
T COG1712 1 LKVGIVGC-GAIGKFLLELVRDG-RVD---FELVAVYDRDEEKAKELEASVGR----------RCV---SDIDELIAEVD 62 (255)
T ss_pred CeEEEEec-cHHHHHHHHHHhcC-Ccc---eeEEEEecCCHHHHHHHHhhcCC----------Ccc---ccHHHHhhccc
Confidence 36788886 99999999987643 211 13578889999999888775531 112 33666678999
Q ss_pred EEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEE
Q 012947 91 LLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLV 146 (452)
Q Consensus 91 vVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv 146 (452)
+||-||++-.. ...+...+++|.|++-+|--...-+.+..++.+.|+..+..|-
T Consensus 63 lvVEaAS~~Av--~e~~~~~L~~g~d~iV~SVGALad~~l~erl~~lak~~~~rv~ 116 (255)
T COG1712 63 LVVEAASPEAV--REYVPKILKAGIDVIVMSVGALADEGLRERLRELAKCGGARVY 116 (255)
T ss_pred eeeeeCCHHHH--HHHhHHHHhcCCCEEEEechhccChHHHHHHHHHHhcCCcEEE
Confidence 99999986432 3455666778888777663222223344556677777777654
No 365
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=97.01 E-value=0.0064 Score=60.67 Aligned_cols=114 Identities=17% Similarity=0.225 Sum_probs=73.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
...+++|+|+ |.+|+.+++.|.+.| .+|.+.+|+.++.+.. +.++ ...+ +.+++.+.+++
T Consensus 151 ~g~kvlViG~-G~iG~~~a~~L~~~G-------a~V~v~~r~~~~~~~~-~~~G------~~~~-----~~~~l~~~l~~ 210 (296)
T PRK08306 151 HGSNVLVLGF-GRTGMTLARTLKALG-------ANVTVGARKSAHLARI-TEMG------LSPF-----HLSELAEEVGK 210 (296)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHH-HHcC------Ceee-----cHHHHHHHhCC
Confidence 3578999997 789999999999988 7999999998876543 3332 1221 23567888899
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCC
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACG 150 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G 150 (452)
+|+|||++.+.. .....++. ...+...||+...+.-+. + +.+++.|+.++...|
T Consensus 211 aDiVI~t~p~~~-i~~~~l~~-~~~g~vIIDla~~pggtd-----~-~~a~~~Gv~~~~~~~ 264 (296)
T PRK08306 211 IDIIFNTIPALV-LTKEVLSK-MPPEALIIDLASKPGGTD-----F-EYAEKRGIKALLAPG 264 (296)
T ss_pred CCEEEECCChhh-hhHHHHHc-CCCCcEEEEEccCCCCcC-----e-eehhhCCeEEEEECC
Confidence 999999984321 11112111 234556888876543221 2 345667777764433
No 366
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=97.01 E-value=0.0053 Score=59.54 Aligned_cols=103 Identities=17% Similarity=0.188 Sum_probs=68.5
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh-------------------hHHHHHHHHhCC-CCCCC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-------------------TRVKQALQWASP-SHSLS 68 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~-------------------~kl~~l~~~l~~-~~~~~ 68 (452)
++.+|+|+|+ |.+|..++++|++.|- -++.+++.+. .|.+.+.+.+.. ....+
T Consensus 31 ~~~~VliiG~-GglGs~va~~La~~Gv------g~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~ 103 (245)
T PRK05690 31 KAARVLVVGL-GGLGCAASQYLAAAGV------GTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIA 103 (245)
T ss_pred cCCeEEEECC-CHHHHHHHHHHHHcCC------CEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCE
Confidence 3568999999 8899999999999984 4677765531 244444443322 11223
Q ss_pred ccEEEEeCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEe
Q 012947 69 IPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDI 120 (452)
Q Consensus 69 v~~v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDl 120 (452)
+..+...++ ++.+.+.++++|+||.|...+.. -..+.++|.+.++.+|+.
T Consensus 104 i~~~~~~i~-~~~~~~~~~~~DiVi~~~D~~~~-r~~ln~~~~~~~ip~v~~ 153 (245)
T PRK05690 104 IETINARLD-DDELAALIAGHDLVLDCTDNVAT-RNQLNRACFAAKKPLVSG 153 (245)
T ss_pred EEEEeccCC-HHHHHHHHhcCCEEEecCCCHHH-HHHHHHHHHHhCCEEEEe
Confidence 444444443 46677888999999999864432 245778888888887764
No 367
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=97.01 E-value=0.0043 Score=60.02 Aligned_cols=103 Identities=16% Similarity=0.215 Sum_probs=66.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh-------------------hHHHHHHHHhCC-CCCCCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-------------------TRVKQALQWASP-SHSLSI 69 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~-------------------~kl~~l~~~l~~-~~~~~v 69 (452)
..+|+|.|+ |.+|..++++|++.|. -++.+++.+. .|.+.+.+.+.. ....++
T Consensus 24 ~~~VlvvG~-GglGs~va~~La~~Gv------g~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i 96 (240)
T TIGR02355 24 ASRVLIVGL-GGLGCAASQYLAAAGV------GNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAI 96 (240)
T ss_pred CCcEEEECc-CHHHHHHHHHHHHcCC------CEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEE
Confidence 467999998 7899999999999984 4666666542 233333333321 112233
Q ss_pred cEEEEeCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEec
Q 012947 70 PILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 70 ~~v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDls 121 (452)
..+...+ +.+.+.+++++.|+||.|...+.. ...+.++|.+.++.+|.-+
T Consensus 97 ~~~~~~i-~~~~~~~~~~~~DlVvd~~D~~~~-r~~ln~~~~~~~ip~v~~~ 146 (240)
T TIGR02355 97 NPINAKL-DDAELAALIAEHDIVVDCTDNVEV-RNQLNRQCFAAKVPLVSGA 146 (240)
T ss_pred EEEeccC-CHHHHHHHhhcCCEEEEcCCCHHH-HHHHHHHHHHcCCCEEEEE
Confidence 3333333 346678888999999999865432 2457788888888888754
No 368
>PRK13303 L-aspartate dehydrogenase; Provisional
Probab=97.00 E-value=0.0075 Score=59.18 Aligned_cols=122 Identities=16% Similarity=0.147 Sum_probs=75.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
++|.|+|. |.+|+.+++.|.+... .++..+.....+.+...+.+. ..+. . .+|.+++ -.++|
T Consensus 2 ~rVgIiG~-G~iG~~~~~~l~~~~~------~~l~~v~~~~~~~~~~~~~~~----~~~~--~--~~d~~~l---~~~~D 63 (265)
T PRK13303 2 MKVAMIGF-GAIGAAVLELLEHDPD------LRVDWVIVPEHSIDAVRRALG----EAVR--V--VSSVDAL---PQRPD 63 (265)
T ss_pred cEEEEECC-CHHHHHHHHHHhhCCC------ceEEEEEEcCCCHHHHhhhhc----cCCe--e--eCCHHHh---ccCCC
Confidence 68999999 9999999999987642 444333322222222222221 1111 1 2344444 35799
Q ss_pred EEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCC
Q 012947 91 LLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFD 152 (452)
Q Consensus 91 vVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~ 152 (452)
+||.|+++... ..++..|+++|.|.+-.+....-.......+.+.|+++|+.+....|+.
T Consensus 64 vVve~t~~~~~--~e~~~~aL~aGk~Vvi~s~~Al~d~~~~~~L~~~A~~~g~~l~v~sga~ 123 (265)
T PRK13303 64 LVVECAGHAAL--KEHVVPILKAGIDCAVISVGALADEALRERLEQAAEAGGARLHLLSGAI 123 (265)
T ss_pred EEEECCCHHHH--HHHHHHHHHcCCCEEEeChHHhcCHHHHHHHHHHHHHCCCEEEEeChHh
Confidence 99999987533 5789999999999886553211113333556778888888766555554
No 369
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=96.99 E-value=0.0035 Score=61.36 Aligned_cols=131 Identities=11% Similarity=0.050 Sum_probs=79.5
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCC--CccEEEEeCCCHHHHHHHHcCcc
Q 012947 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSL--SIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 13 ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~--~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
|.|+||+|.+|..++..|+..+. . ...++.+.++++++++....++..-... ...+. . ..++.+.++++|
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~-~--~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~---~--~~d~~~~~~~aD 72 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSV-L--LAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVS---I--TDDPYEAFKDAD 72 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCC-C--cceEEEEEeCCcccchHHHHHHHHhhhhccCcEEE---E--CCchHHHhCCCC
Confidence 57999999999999999998761 0 1158999999998888777766420001 11111 1 123567789999
Q ss_pred EEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhc
Q 012947 91 LLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQW 167 (452)
Q Consensus 91 vVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~ 167 (452)
+||.++|.-...|..=.+...+ ....++.+.....+.+ ..+..|+ . +-|.|+.++.+.+..
T Consensus 73 iVv~t~~~~~~~g~~r~~~~~~----------n~~i~~~i~~~i~~~~-p~a~~i~-~----tNP~d~~t~~~~~~s 133 (263)
T cd00650 73 VVIITAGVGRKPGMGRLDLLKR----------NVPIVKEIGDNIEKYS-PDAWIIV-V----SNPVDIITYLVWRYS 133 (263)
T ss_pred EEEECCCCCCCcCCCHHHHHHH----------HHHHHHHHHHHHHHHC-CCeEEEE-e----cCcHHHHHHHHHHHh
Confidence 9999998654433211111111 2334444444444444 2233333 2 368888888887774
No 370
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=96.98 E-value=0.0052 Score=62.89 Aligned_cols=104 Identities=11% Similarity=0.025 Sum_probs=71.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh-------------------hHHHHHHHHhCC-CCCCC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-------------------TRVKQALQWASP-SHSLS 68 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~-------------------~kl~~l~~~l~~-~~~~~ 68 (452)
+..+|+|+|+ |.+|..++++|++.|. -++.+++.+. .|.+.+.+.+.. ....+
T Consensus 27 ~~~~VlivG~-GGlGs~~a~~La~~Gv------g~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~ 99 (355)
T PRK05597 27 FDAKVAVIGA-GGLGSPALLYLAGAGV------GHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVK 99 (355)
T ss_pred hCCeEEEECC-CHHHHHHHHHHHHcCC------CeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcE
Confidence 3468999998 7899999999999984 4777777653 355555554432 12234
Q ss_pred ccEEEEeCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEec
Q 012947 69 IPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 69 v~~v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDls 121 (452)
+..+...++ .+.+.++++++|+||.|..-+.. ...+.++|.+.++.+|...
T Consensus 100 v~~~~~~i~-~~~~~~~~~~~DvVvd~~d~~~~-r~~~n~~c~~~~ip~v~~~ 150 (355)
T PRK05597 100 VTVSVRRLT-WSNALDELRDADVILDGSDNFDT-RHLASWAAARLGIPHVWAS 150 (355)
T ss_pred EEEEEeecC-HHHHHHHHhCCCEEEECCCCHHH-HHHHHHHHHHcCCCEEEEE
Confidence 444445554 46677888999999999864422 1456788999888877654
No 371
>PRK06223 malate dehydrogenase; Reviewed
Probab=96.98 E-value=0.0043 Score=62.04 Aligned_cols=129 Identities=12% Similarity=0.044 Sum_probs=77.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC-CCCCc-cEEEEeCCCHHHHHHHHcC
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSI-PILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~-~~~~v-~~v~~Dl~d~~sl~~~~~~ 88 (452)
++|.|+|| |.+|..++..++..+. .++.+.++++++++....++... ..... ..+.. ..| . +.+++
T Consensus 3 ~KI~VIGa-G~vG~~ia~~la~~~~------~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~-~~d---~-~~~~~ 70 (307)
T PRK06223 3 KKISIIGA-GNVGATLAHLLALKEL------GDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITG-TND---Y-EDIAG 70 (307)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCC------eEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEe-CCC---H-HHHCC
Confidence 58999999 9999999999998761 28999999988876654443210 00011 11221 123 2 34789
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhc
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQW 167 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~ 167 (452)
+|+||.++|.....+..-.+...+ ....++.+.....+.+. .++.|+. +-|.|+.++.+.+..
T Consensus 71 aDiVii~~~~p~~~~~~r~~~~~~----------n~~i~~~i~~~i~~~~~-~~~viv~-----tNP~d~~~~~~~~~s 133 (307)
T PRK06223 71 SDVVVITAGVPRKPGMSRDDLLGI----------NAKIMKDVAEGIKKYAP-DAIVIVV-----TNPVDAMTYVALKES 133 (307)
T ss_pred CCEEEECCCCCCCcCCCHHHHHHH----------HHHHHHHHHHHHHHHCC-CeEEEEe-----cCcHHHHHHHHHHHh
Confidence 999999998655444322222211 23444554444444332 2333432 578899999988754
No 372
>PRK08328 hypothetical protein; Provisional
Probab=96.97 E-value=0.0065 Score=58.38 Aligned_cols=103 Identities=10% Similarity=0.108 Sum_probs=62.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHH--------------------HHHHHHhCC-CCCCC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRV--------------------KQALQWASP-SHSLS 68 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl--------------------~~l~~~l~~-~~~~~ 68 (452)
..+|+|+|+ |.+|..+++.|++.|. -++.+++.+.-.. +...+.+.. ....+
T Consensus 27 ~~~VlIiG~-GGlGs~ia~~La~~Gv------g~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~ 99 (231)
T PRK08328 27 KAKVAVVGV-GGLGSPVAYYLAAAGV------GRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIK 99 (231)
T ss_pred CCcEEEECC-CHHHHHHHHHHHHcCC------CEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCE
Confidence 467999998 7789999999999984 4777777543211 111111111 01222
Q ss_pred ccEEEEeCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEec
Q 012947 69 IPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 69 v~~v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDls 121 (452)
+..+...+ +++.+.+++++.|+||.|...+. ....+.++|.+.++.+|+..
T Consensus 100 v~~~~~~~-~~~~~~~~l~~~D~Vid~~d~~~-~r~~l~~~~~~~~ip~i~g~ 150 (231)
T PRK08328 100 IETFVGRL-SEENIDEVLKGVDVIVDCLDNFE-TRYLLDDYAHKKGIPLVHGA 150 (231)
T ss_pred EEEEeccC-CHHHHHHHHhcCCEEEECCCCHH-HHHHHHHHHHHcCCCEEEEe
Confidence 33333334 34567777888888888875432 22345567777777777544
No 373
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=96.96 E-value=0.0043 Score=56.14 Aligned_cols=112 Identities=20% Similarity=0.211 Sum_probs=70.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
.+|-++|- |-.|+.+++.|++.+ ++|.+.+|++++.+++.+. . ...+ ++..++++++|
T Consensus 2 ~~Ig~IGl-G~mG~~~a~~L~~~g-------~~v~~~d~~~~~~~~~~~~-------g--~~~~-----~s~~e~~~~~d 59 (163)
T PF03446_consen 2 MKIGFIGL-GNMGSAMARNLAKAG-------YEVTVYDRSPEKAEALAEA-------G--AEVA-----DSPAEAAEQAD 59 (163)
T ss_dssp BEEEEE---SHHHHHHHHHHHHTT-------TEEEEEESSHHHHHHHHHT-------T--EEEE-----SSHHHHHHHBS
T ss_pred CEEEEEch-HHHHHHHHHHHHhcC-------CeEEeeccchhhhhhhHHh-------h--hhhh-----hhhhhHhhccc
Confidence 47889997 899999999999998 8999999999999888763 1 2333 34667778889
Q ss_pred EEeecCCCCCCCCHHHHH-----HHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcC
Q 012947 91 LLLNCVGPYRLHGDPVAA-----ACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSA 148 (452)
Q Consensus 91 vVIn~aGp~~~~~~~vv~-----ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~ 148 (452)
+||.|+..... -+.++. .....|.-+||++...+-..+ +..+..++.|+..+-+
T Consensus 60 vvi~~v~~~~~-v~~v~~~~~i~~~l~~g~iiid~sT~~p~~~~---~~~~~~~~~g~~~vda 118 (163)
T PF03446_consen 60 VVILCVPDDDA-VEAVLFGENILAGLRPGKIIIDMSTISPETSR---ELAERLAAKGVRYVDA 118 (163)
T ss_dssp EEEE-SSSHHH-HHHHHHCTTHGGGS-TTEEEEE-SS--HHHHH---HHHHHHHHTTEEEEEE
T ss_pred ceEeecccchh-hhhhhhhhHHhhccccceEEEecCCcchhhhh---hhhhhhhhccceeeee
Confidence 99999842111 011211 112346679999876554322 2345566678877643
No 374
>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional
Probab=96.95 E-value=0.0012 Score=66.10 Aligned_cols=85 Identities=15% Similarity=0.126 Sum_probs=60.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
+++|-|.|||||+|+.+++.|.++.. .++....++..+ |+.+ .+..++++
T Consensus 2 ~~~VaIvGAtGy~G~eLlrlL~~hp~------~~l~~~~s~~~~---------------------~~~~---~~~~~~~~ 51 (313)
T PRK11863 2 KPKVFIDGEAGTTGLQIRERLAGRSD------IELLSIPEAKRK---------------------DAAA---RRELLNAA 51 (313)
T ss_pred CcEEEEECCCCHHHHHHHHHHhcCCC------eEEEEEecCCCC---------------------cccC---chhhhcCC
Confidence 47899999999999999999998862 666655544322 0111 12345689
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHH
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEF 126 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~ 126 (452)
|+|+.+.+. . ....++....+.|+..||+++...+
T Consensus 52 DvvFlalp~-~-~s~~~~~~~~~~g~~VIDlSadfRl 86 (313)
T PRK11863 52 DVAILCLPD-D-AAREAVALIDNPATRVIDASTAHRT 86 (313)
T ss_pred CEEEECCCH-H-HHHHHHHHHHhCCCEEEECChhhhc
Confidence 999998832 2 2356777777889999999987643
No 375
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=96.94 E-value=0.0067 Score=62.42 Aligned_cols=103 Identities=17% Similarity=0.135 Sum_probs=71.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-------------------hhHHHHHHHHhCC-CCCCCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASP-SHSLSI 69 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-------------------~~kl~~l~~~l~~-~~~~~v 69 (452)
..+|+|+|+ |.+|..++++|++.|. .++.+++.+ ..|.+.+.+.+.. ....++
T Consensus 41 ~~~VliiG~-GglG~~v~~~La~~Gv------g~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i 113 (370)
T PRK05600 41 NARVLVIGA-GGLGCPAMQSLASAGV------GTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRV 113 (370)
T ss_pred CCcEEEECC-CHHHHHHHHHHHHcCC------CEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCee
Confidence 467999998 7789999999999984 478887765 2344444444432 112344
Q ss_pred cEEEEeCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEec
Q 012947 70 PILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 70 ~~v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDls 121 (452)
..+...++ ++.+.++++++|+||.|...+.. -..+-++|.+.++.+|...
T Consensus 114 ~~~~~~i~-~~~~~~~~~~~DlVid~~Dn~~~-r~~in~~~~~~~iP~v~~~ 163 (370)
T PRK05600 114 NALRERLT-AENAVELLNGVDLVLDGSDSFAT-KFLVADAAEITGTPLVWGT 163 (370)
T ss_pred EEeeeecC-HHHHHHHHhCCCEEEECCCCHHH-HHHHHHHHHHcCCCEEEEE
Confidence 55555554 56788889999999999865432 2456688999888877653
No 376
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=96.91 E-value=0.0084 Score=58.86 Aligned_cols=35 Identities=11% Similarity=0.171 Sum_probs=28.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN 50 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~ 50 (452)
+..+|+|+|+ |.+|..+++.|++.|. -++.+++.+
T Consensus 29 ~~s~VlVvG~-GGVGs~vae~Lar~GV------g~itLiD~D 63 (268)
T PRK15116 29 ADAHICVVGI-GGVGSWAAEALARTGI------GAITLIDMD 63 (268)
T ss_pred cCCCEEEECc-CHHHHHHHHHHHHcCC------CEEEEEeCC
Confidence 3467999998 7899999999999984 477777755
No 377
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=96.90 E-value=0.0078 Score=60.41 Aligned_cols=129 Identities=18% Similarity=0.161 Sum_probs=74.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh--hHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP--TRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~--~kl~~l~~~l~~~-~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
++|.|+||||++|..++..|+..+.. .++.+.+|++ ++++....++... ....... .....+ +. +.++
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~-----~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~-~i~~~~--d~-~~l~ 71 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVV-----KEINLISRPKSLEKLKGLRLDIYDALAAAGIDA-EIKISS--DL-SDVA 71 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCC-----CEEEEEECcccccccccccchhhhchhccCCCc-EEEECC--CH-HHhC
Confidence 47999999999999999999998731 3689999965 5665444333210 0011111 122221 12 3489
Q ss_pred CccEEeecCCCCCCCC---HHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHh
Q 012947 88 QTKLLLNCVGPYRLHG---DPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNS 164 (452)
Q Consensus 88 ~~dvVIn~aGp~~~~~---~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~ 164 (452)
++|+||-++|.....+ ..+++. ....++.......+.+. .++.|+.+ -|-|+++|.+.
T Consensus 72 ~aDiViitag~p~~~~~~r~dl~~~-------------n~~i~~~~~~~i~~~~~-~~~viv~~-----npvd~~t~~~~ 132 (309)
T cd05294 72 GSDIVIITAGVPRKEGMSRLDLAKK-------------NAKIVKKYAKQIAEFAP-DTKILVVT-----NPVDVMTYKAL 132 (309)
T ss_pred CCCEEEEecCCCCCCCCCHHHHHHH-------------HHHHHHHHHHHHHHHCC-CeEEEEeC-----CchHHHHHHHH
Confidence 9999999999543322 112121 12334444444443332 34445433 57788898887
Q ss_pred hhc
Q 012947 165 RQW 167 (452)
Q Consensus 165 ~~~ 167 (452)
+..
T Consensus 133 ~~~ 135 (309)
T cd05294 133 KES 135 (309)
T ss_pred Hhc
Confidence 655
No 378
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.86 E-value=0.0039 Score=65.02 Aligned_cols=72 Identities=22% Similarity=0.314 Sum_probs=57.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+++|+|+ |.+|+.++.+|...|. .++.++.|+.++.+.+.++++ .... ..-+++.+.+.++
T Consensus 181 ~kkvlviGa-G~~a~~va~~L~~~g~------~~I~V~nRt~~ra~~La~~~~-----~~~~-----~~~~~l~~~l~~a 243 (414)
T PRK13940 181 SKNVLIIGA-GQTGELLFRHVTALAP------KQIMLANRTIEKAQKITSAFR-----NASA-----HYLSELPQLIKKA 243 (414)
T ss_pred CCEEEEEcC-cHHHHHHHHHHHHcCC------CEEEEECCCHHHHHHHHHHhc-----CCeE-----ecHHHHHHHhccC
Confidence 467999998 8899999999999884 589999999999998888763 1121 2235678889999
Q ss_pred cEEeecCCC
Q 012947 90 KLLLNCVGP 98 (452)
Q Consensus 90 dvVIn~aGp 98 (452)
|+||||.+.
T Consensus 244 DiVI~aT~a 252 (414)
T PRK13940 244 DIIIAAVNV 252 (414)
T ss_pred CEEEECcCC
Confidence 999999864
No 379
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=96.85 E-value=0.0088 Score=50.45 Aligned_cols=70 Identities=21% Similarity=0.360 Sum_probs=57.7
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-HcCccE
Q 012947 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQTKL 91 (452)
Q Consensus 13 ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~-~~~~dv 91 (452)
|+|+|. |-+|+.+++.|.+.+ .++.++.+++++.+++.++ .+.++.+|.+|++.++++ +++++.
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~-------~~vvvid~d~~~~~~~~~~-------~~~~i~gd~~~~~~l~~a~i~~a~~ 65 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGG-------IDVVVIDRDPERVEELREE-------GVEVIYGDATDPEVLERAGIEKADA 65 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTT-------SEEEEEESSHHHHHHHHHT-------TSEEEES-TTSHHHHHHTTGGCESE
T ss_pred eEEEcC-CHHHHHHHHHHHhCC-------CEEEEEECCcHHHHHHHhc-------ccccccccchhhhHHhhcCccccCE
Confidence 678887 678999999999965 6999999999998877653 378999999999999885 678998
Q ss_pred EeecCC
Q 012947 92 LLNCVG 97 (452)
Q Consensus 92 VIn~aG 97 (452)
||-+.+
T Consensus 66 vv~~~~ 71 (116)
T PF02254_consen 66 VVILTD 71 (116)
T ss_dssp EEEESS
T ss_pred EEEccC
Confidence 888764
No 380
>PLN02602 lactate dehydrogenase
Probab=96.85 E-value=0.027 Score=57.45 Aligned_cols=129 Identities=16% Similarity=0.180 Sum_probs=79.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC--CCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~--~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
.+|.|+|| |.+|..++-.|+..+-. -++.+.++++++++..+.++.. +..... .+.. -.| . +.+++
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~-----~el~LiDi~~~~~~g~a~DL~~~~~~~~~~-~i~~-~~d---y-~~~~d 105 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLA-----DELALVDVNPDKLRGEMLDLQHAAAFLPRT-KILA-STD---Y-AVTAG 105 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCC-----CEEEEEeCCCchhhHHHHHHHhhhhcCCCC-EEEe-CCC---H-HHhCC
Confidence 79999997 99999999999887631 4799999999988877776642 111122 2222 123 2 23889
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhc
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQW 167 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~ 167 (452)
+|+||-+||.....++.=.+... .....++.+.....+.+. .++.|+- +-|.|+.++.+.+..
T Consensus 106 aDiVVitAG~~~k~g~tR~dll~----------~N~~I~~~i~~~I~~~~p-~~ivivv-----tNPvdv~t~~~~k~s 168 (350)
T PLN02602 106 SDLCIVTAGARQIPGESRLNLLQ----------RNVALFRKIIPELAKYSP-DTILLIV-----SNPVDVLTYVAWKLS 168 (350)
T ss_pred CCEEEECCCCCCCcCCCHHHHHH----------HHHHHHHHHHHHHHHHCC-CeEEEEe-----cCchHHHHHHHHHHh
Confidence 99999999975544421111111 123444555444444332 2333332 268899999887665
No 381
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.84 E-value=0.023 Score=56.97 Aligned_cols=128 Identities=15% Similarity=0.155 Sum_probs=78.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC--CCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~--~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
|+|.|+|+ |.+|..++..|+..+.. .++.+.+|++++++....++.. +...... +. ..|. +.+++
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~~-----~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~-i~--~~d~----~~l~~ 67 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGLA-----SEIVLVDINKAKAEGEAMDLAHGTPFVKPVR-IY--AGDY----ADCKG 67 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCC-----CEEEEEECCchhhhhHHHHHHccccccCCeE-Ee--eCCH----HHhCC
Confidence 47999998 99999999999998731 4799999999887754444431 0011111 11 1232 34789
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhc
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQW 167 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~ 167 (452)
+|+||.++|.....+..-.+.... ....++.+.+...+.+ .++++++- +-|.|+.++.+.+.-
T Consensus 68 aDiViita~~~~~~~~~r~dl~~~----------n~~i~~~~~~~l~~~~-~~giiiv~-----tNP~d~~~~~~~~~s 130 (308)
T cd05292 68 ADVVVITAGANQKPGETRLDLLKR----------NVAIFKEIIPQILKYA-PDAILLVV-----TNPVDVLTYVAYKLS 130 (308)
T ss_pred CCEEEEccCCCCCCCCCHHHHHHH----------HHHHHHHHHHHHHHHC-CCeEEEEe-----cCcHHHHHHHHHHHH
Confidence 999999998654444222222222 2334444444444433 23554443 368899999887764
No 382
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=96.78 E-value=0.011 Score=55.44 Aligned_cols=104 Identities=13% Similarity=0.267 Sum_probs=64.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh---------------------hHHHHHHHHhCC-CCCC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP---------------------TRVKQALQWASP-SHSL 67 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~---------------------~kl~~l~~~l~~-~~~~ 67 (452)
+.+|+|+|++| +|..+++.|+..|. -++.+++.+. .|.+.+.+.+.. ....
T Consensus 19 ~s~VlviG~gg-lGsevak~L~~~GV------g~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v 91 (198)
T cd01485 19 SAKVLIIGAGA-LGAEIAKNLVLAGI------DSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNV 91 (198)
T ss_pred hCcEEEECCCH-HHHHHHHHHHHcCC------CEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCC
Confidence 46799999966 99999999999984 4677666431 123233333321 1122
Q ss_pred CccEEEEeCCC-HHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEec
Q 012947 68 SIPILTADTTD-PPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 68 ~v~~v~~Dl~d-~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDls 121 (452)
++..+..++.+ .+...+.+++.|+||.|..+.. .-..+-+.|.+.++.+|...
T Consensus 92 ~i~~~~~~~~~~~~~~~~~~~~~dvVi~~~d~~~-~~~~ln~~c~~~~ip~i~~~ 145 (198)
T cd01485 92 KLSIVEEDSLSNDSNIEEYLQKFTLVIATEENYE-RTAKVNDVCRKHHIPFISCA 145 (198)
T ss_pred EEEEEecccccchhhHHHHHhCCCEEEECCCCHH-HHHHHHHHHHHcCCCEEEEE
Confidence 33333334432 4556777889999998876532 22456678888877776654
No 383
>PRK09620 hypothetical protein; Provisional
Probab=96.78 E-value=0.0018 Score=62.11 Aligned_cols=79 Identities=8% Similarity=0.035 Sum_probs=52.2
Q ss_pred CCeEEEEcCC----------------chHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEE
Q 012947 10 LFDVIILGAS----------------GFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILT 73 (452)
Q Consensus 10 ~~~ilV~GAT----------------G~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~ 73 (452)
..+|+||+|. ||+|.++|++|+++| ++|.+..+....... .+. .......+.
T Consensus 3 gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~G-------a~V~li~g~~~~~~~---~~~--~~~~~~~V~ 70 (229)
T PRK09620 3 GKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKG-------AHVIYLHGYFAEKPN---DIN--NQLELHPFE 70 (229)
T ss_pred CCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCC-------CeEEEEeCCCcCCCc---ccC--CceeEEEEe
Confidence 4579999875 999999999999999 788887763221100 000 011222344
Q ss_pred EeCCCHHHHHHHHc--CccEEeecCCCCC
Q 012947 74 ADTTDPPSLHRLCS--QTKLLLNCVGPYR 100 (452)
Q Consensus 74 ~Dl~d~~sl~~~~~--~~dvVIn~aGp~~ 100 (452)
.|.+..+.+.++++ ++|+|||+|+...
T Consensus 71 s~~d~~~~l~~~~~~~~~D~VIH~AAvsD 99 (229)
T PRK09620 71 GIIDLQDKMKSIITHEKVDAVIMAAAGSD 99 (229)
T ss_pred cHHHHHHHHHHHhcccCCCEEEECccccc
Confidence 44444567788885 6899999998743
No 384
>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]
Probab=96.78 E-value=0.0057 Score=55.71 Aligned_cols=115 Identities=19% Similarity=0.270 Sum_probs=78.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
.+..+|+||||-+|+.+.++++..+. .-+|.+++|.+---.+ ....+.....|.+.-+++....++.
T Consensus 18 ~~s~fvlGAtG~~G~~llk~~~E~~~-----FSKV~~i~RR~~~d~a--------t~k~v~q~~vDf~Kl~~~a~~~qg~ 84 (238)
T KOG4039|consen 18 NMSGFVLGATGLCGGGLLKHAQEAPQ-----FSKVYAILRRELPDPA--------TDKVVAQVEVDFSKLSQLATNEQGP 84 (238)
T ss_pred ccceEEEeccccccHHHHHHHHhccc-----ceeEEEEEeccCCCcc--------ccceeeeEEechHHHHHHHhhhcCC
Confidence 46789999999999999999998873 2588888886421111 1345667778888888888888999
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHhCCc-EEEecCcHHHHHHHHHHHHHHHHhCccE---EEcCCCCCc
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHSGCD-YLDISGEPEFMERMEARYHEKAVETGSL---LVSACGFDS 153 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~g~~-yvDlsge~~~~~~~~~~~~~~A~~~gv~---iv~~~G~~s 153 (452)
||.+.|.|.... .+|.+ ++-+. ..+ ..+..+.|+++|+. ++++.|.|.
T Consensus 85 dV~FcaLgTTRg----------kaGadgfykvD--hDy----vl~~A~~AKe~Gck~fvLvSS~GAd~ 136 (238)
T KOG4039|consen 85 DVLFCALGTTRG----------KAGADGFYKVD--HDY----VLQLAQAAKEKGCKTFVLVSSAGADP 136 (238)
T ss_pred ceEEEeeccccc----------ccccCceEeec--hHH----HHHHHHHHHhCCCeEEEEEeccCCCc
Confidence 999999885432 12222 22221 112 23345678888875 668888653
No 385
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.77 E-value=0.015 Score=58.40 Aligned_cols=130 Identities=14% Similarity=0.113 Sum_probs=80.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC--CCCCCccEEEEeCCCHHHHHHHHc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~--~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
..+|.|+|| |.+|..++-.|+..+- .-++.+.++++++++....++.. +..... .+.+ -.|. + .++
T Consensus 3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~-----~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~-~v~~-~~dy---~-~~~ 70 (312)
T cd05293 3 RNKVTVVGV-GQVGMACAISILAKGL-----ADELVLVDVVEDKLKGEAMDLQHGSAFLKNP-KIEA-DKDY---S-VTA 70 (312)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCC-----CCEEEEEeCCccHHHHHHHHHHHhhccCCCC-EEEE-CCCH---H-HhC
Confidence 358999997 9999999999988762 14799999999888777776642 111111 2221 1232 2 378
Q ss_pred CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhc
Q 012947 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQW 167 (452)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~ 167 (452)
++|+||.++|.....++.=.+... .....++++.....+.+ -+++.|+- +-|.|+.++.+.+.-
T Consensus 71 ~adivvitaG~~~k~g~~R~dll~----------~N~~i~~~~~~~i~~~~-p~~~vivv-----sNP~d~~t~~~~k~s 134 (312)
T cd05293 71 NSKVVIVTAGARQNEGESRLDLVQ----------RNVDIFKGIIPKLVKYS-PNAILLVV-----SNPVDIMTYVAWKLS 134 (312)
T ss_pred CCCEEEECCCCCCCCCCCHHHHHH----------HHHHHHHHHHHHHHHhC-CCcEEEEc-----cChHHHHHHHHHHHh
Confidence 999999999975544421111111 12344455544444433 23444443 368899999888874
No 386
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=96.76 E-value=0.0086 Score=61.09 Aligned_cols=77 Identities=17% Similarity=0.203 Sum_probs=57.4
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 8 ~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
.....|||+||+|.+|++.++-+...+ +..+++.++.+++ ++++++++ -...|..+++-++...+
T Consensus 156 ~~g~~vLv~ggsggVG~~aiQlAk~~~-------~~~v~t~~s~e~~-~l~k~lGA-------d~vvdy~~~~~~e~~kk 220 (347)
T KOG1198|consen 156 SKGKSVLVLGGSGGVGTAAIQLAKHAG-------AIKVVTACSKEKL-ELVKKLGA-------DEVVDYKDENVVELIKK 220 (347)
T ss_pred CCCCeEEEEeCCcHHHHHHHHHHHhcC-------CcEEEEEcccchH-HHHHHcCC-------cEeecCCCHHHHHHHHh
Confidence 345689999999999999999887776 4667777788877 45666642 23568888655555555
Q ss_pred ----CccEEeecCCCC
Q 012947 88 ----QTKLLLNCVGPY 99 (452)
Q Consensus 88 ----~~dvVIn~aGp~ 99 (452)
+.|+|+.|+|..
T Consensus 221 ~~~~~~DvVlD~vg~~ 236 (347)
T KOG1198|consen 221 YTGKGVDVVLDCVGGS 236 (347)
T ss_pred hcCCCccEEEECCCCC
Confidence 489999999863
No 387
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=96.76 E-value=0.016 Score=54.52 Aligned_cols=115 Identities=15% Similarity=0.114 Sum_probs=74.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
+.++++|.|. |.+|+.++++|.+.| .+|.+.+++.++++++.+.++ .. .+|. +++.. .+
T Consensus 27 ~gk~v~I~G~-G~vG~~~A~~L~~~G-------~~Vvv~D~~~~~~~~~~~~~g------~~--~v~~---~~l~~--~~ 85 (200)
T cd01075 27 EGKTVAVQGL-GKVGYKLAEHLLEEG-------AKLIVADINEEAVARAAELFG------AT--VVAP---EEIYS--VD 85 (200)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCC-------CEEEEEcCCHHHHHHHHHHcC------CE--EEcc---hhhcc--cc
Confidence 4568999998 689999999999998 799999999999888776542 12 2222 22222 27
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCC
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGF 151 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~ 151 (452)
+|+++.|+.-.... .. ...+.+..+|--.+..++.. ....+.-++.|+.+++-++.
T Consensus 86 ~Dv~vp~A~~~~I~-~~---~~~~l~~~~v~~~AN~~~~~---~~~~~~L~~~Gi~~~Pd~~~ 141 (200)
T cd01075 86 ADVFAPCALGGVIN-DD---TIPQLKAKAIAGAANNQLAD---PRHGQMLHERGILYAPDYVV 141 (200)
T ss_pred CCEEEecccccccC-HH---HHHHcCCCEEEECCcCccCC---HhHHHHHHHCCCEEeCceee
Confidence 99999988532222 22 22334566554445555442 22345567789988875554
No 388
>cd05295 MDH_like Malate dehydrogenase-like. These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.75 E-value=0.005 Score=64.58 Aligned_cols=140 Identities=11% Similarity=-0.011 Sum_probs=86.7
Q ss_pred CCCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec--ChhHHHHHHHHhCC---CCCCCccEEEEeCCCHH
Q 012947 6 QIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR--NPTRVKQALQWASP---SHSLSIPILTADTTDPP 80 (452)
Q Consensus 6 ~~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR--~~~kl~~l~~~l~~---~~~~~v~~v~~Dl~d~~ 80 (452)
.+..+.+|+||||+|.||..++-.+++-.--+..+...+.+.+. +.++++..+-++.. +....+.+. . +
T Consensus 119 ~~~~p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~-~--~--- 192 (452)
T cd05295 119 SKINPLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT-T--D--- 192 (452)
T ss_pred cCCCceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE-E--C---
Confidence 45567999999999999999999998721101112377888998 68888887776642 111122222 1 1
Q ss_pred HHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhC-ccEEEcCCCCCcchhhHH
Q 012947 81 SLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVET-GSLLVSACGFDSIPAELG 159 (452)
Q Consensus 81 sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~-gv~iv~~~G~~s~P~dl~ 159 (452)
-.+.++++|+||-++|.....|+.-.+.... ....++.......+.|.+. ++.|+- +-|.|+.
T Consensus 193 -~~ea~~daDvvIitag~prk~G~~R~DLL~~----------N~~Ifk~~g~~I~~~a~~~~~VlVv~-----tNPvD~~ 256 (452)
T cd05295 193 -LDVAFKDAHVIVLLDDFLIKEGEDLEGCIRS----------RVAICQLYGPLIEKNAKEDVKVIVAG-----RTFLNLK 256 (452)
T ss_pred -CHHHhCCCCEEEECCCCCCCcCCCHHHHHHH----------HHHHHHHHHHHHHHhCCCCCeEEEEe-----CCcHHHH
Confidence 2577899999999999755544321111111 1223444445555555433 344432 3688999
Q ss_pred HHHHhhhc
Q 012947 160 VMFNSRQW 167 (452)
Q Consensus 160 ~~~~~~~~ 167 (452)
++.+.+..
T Consensus 257 t~i~~k~a 264 (452)
T cd05295 257 TSILIKYA 264 (452)
T ss_pred HHHHHHHc
Confidence 99998887
No 389
>PTZ00117 malate dehydrogenase; Provisional
Probab=96.73 E-value=0.009 Score=60.26 Aligned_cols=131 Identities=11% Similarity=0.015 Sum_probs=76.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC-CCCCCcc-EEEEeCCCHHHHHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSIP-ILTADTTDPPSLHRLC 86 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~-~~~~~v~-~v~~Dl~d~~sl~~~~ 86 (452)
+.++|.|+|| |.+|..++..++..+- .++++.++++++++....++.. ....... .+.+ .+| .+ .+
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~------~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~-~~d---~~-~l 71 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNL------GDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILG-TNN---YE-DI 71 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCC------CeEEEEECCCccchhHHHHHhhhccccCCCeEEEe-CCC---HH-Hh
Confidence 3468999998 9999999998888762 4799999998776543333321 0001111 1221 123 44 66
Q ss_pred cCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhh
Q 012947 87 SQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQ 166 (452)
Q Consensus 87 ~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~ 166 (452)
+++|+||.++|.....+..-.+....+ ...++++.....+.+. .++.|+- +-|.|+.++.+.+.
T Consensus 72 ~~ADiVVitag~~~~~g~~r~dll~~n----------~~i~~~i~~~i~~~~p-~a~vivv-----sNP~di~t~~~~~~ 135 (319)
T PTZ00117 72 KDSDVVVITAGVQRKEEMTREDLLTIN----------GKIMKSVAESVKKYCP-NAFVICV-----TNPLDCMVKVFQEK 135 (319)
T ss_pred CCCCEEEECCCCCCCCCCCHHHHHHHH----------HHHHHHHHHHHHHHCC-CeEEEEe-----cChHHHHHHHHHHh
Confidence 899999999986544432222211111 1344555454444432 2323332 57889999887765
Q ss_pred c
Q 012947 167 W 167 (452)
Q Consensus 167 ~ 167 (452)
.
T Consensus 136 s 136 (319)
T PTZ00117 136 S 136 (319)
T ss_pred h
Confidence 4
No 390
>PRK07877 hypothetical protein; Provisional
Probab=96.71 E-value=0.0076 Score=66.90 Aligned_cols=105 Identities=10% Similarity=0.069 Sum_probs=72.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC------------------hhHHHHHHHHhCC-CCCCCcc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN------------------PTRVKQALQWASP-SHSLSIP 70 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~------------------~~kl~~l~~~l~~-~~~~~v~ 70 (452)
+.+|+|+|+ | +|..++.+|++.|-- -++.+++.+ ..|.+.+.+.+.. ....++.
T Consensus 107 ~~~V~IvG~-G-lGs~~a~~LaraGvv-----G~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~ 179 (722)
T PRK07877 107 RLRIGVVGL-S-VGHAIAHTLAAEGLC-----GELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVE 179 (722)
T ss_pred cCCEEEEEe-c-HHHHHHHHHHHccCC-----CeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEE
Confidence 467999999 7 899999999998820 255655543 2243333333321 1233455
Q ss_pred EEEEeCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCc
Q 012947 71 ILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGE 123 (452)
Q Consensus 71 ~v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge 123 (452)
.+...++ ++.++++++++|+||.|.--+. ....+.++|.+.++.+|.-++.
T Consensus 180 ~~~~~i~-~~n~~~~l~~~DlVvD~~D~~~-~R~~ln~~a~~~~iP~i~~~~~ 230 (722)
T PRK07877 180 VFTDGLT-EDNVDAFLDGLDVVVEECDSLD-VKVLLREAARARRIPVLMATSD 230 (722)
T ss_pred EEeccCC-HHHHHHHhcCCCEEEECCCCHH-HHHHHHHHHHHcCCCEEEEcCC
Confidence 5555665 6889999999999999986432 2245779999999998877653
No 391
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=96.71 E-value=0.0047 Score=53.77 Aligned_cols=53 Identities=19% Similarity=0.322 Sum_probs=32.4
Q ss_pred CCCCCCCCCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEE-EEecChhHHHHHHHHh
Q 012947 1 MQAQSQIPELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLA-LAGRNPTRVKQALQWA 61 (452)
Q Consensus 1 ~~~~~~~~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~-iagR~~~kl~~l~~~l 61 (452)
|..|......++|-|+|+ |-+|..+++.|.+.+ +.|. +..|+.++.+++.+.+
T Consensus 1 ~~~~~~~~~~l~I~iIGa-GrVG~~La~aL~~ag-------~~v~~v~srs~~sa~~a~~~~ 54 (127)
T PF10727_consen 1 MNTPATQAARLKIGIIGA-GRVGTALARALARAG-------HEVVGVYSRSPASAERAAAFI 54 (127)
T ss_dssp -----------EEEEECT-SCCCCHHHHHHHHTT-------SEEEEESSCHH-HHHHHHC--
T ss_pred CCccccCCCccEEEEECC-CHHHHHHHHHHHHCC-------CeEEEEEeCCccccccccccc
Confidence 667766667799999999 999999999999988 5664 4578887776666554
No 392
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.69 E-value=0.013 Score=56.16 Aligned_cols=115 Identities=13% Similarity=0.154 Sum_probs=70.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC----hhHH-------HHHHHHhCCCCCCCccEEEEeCC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN----PTRV-------KQALQWASPSHSLSIPILTADTT 77 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~----~~kl-------~~l~~~l~~~~~~~v~~v~~Dl~ 77 (452)
+..+++|+|| |..|+.+++.|.+.|-. ..++.+.+|+ .++. +++.+++. .. . .+
T Consensus 24 ~~~rvlvlGA-GgAg~aiA~~L~~~G~~----~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~----~~-~---~~-- 88 (226)
T cd05311 24 EEVKIVINGA-GAAGIAIARLLLAAGAK----PENIVVVDSKGVIYEGREDDLNPDKNEIAKETN----PE-K---TG-- 88 (226)
T ss_pred cCCEEEEECc-hHHHHHHHHHHHHcCcC----cceEEEEeCCCccccccchhhhHHHHHHHHHhc----cC-c---cc--
Confidence 3468999999 88999999999998730 0179999998 4442 22333221 00 0 11
Q ss_pred CHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccE-EEcC
Q 012947 78 DPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSL-LVSA 148 (452)
Q Consensus 78 d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~-iv~~ 148 (452)
.++.+.++++|+|||+.++... ...+++...+..+.| |++... . ..+.+.|++.|+. +.++
T Consensus 89 --~~l~~~l~~~dvlIgaT~~G~~-~~~~l~~m~~~~ivf-~lsnP~--~----e~~~~~A~~~ga~i~a~G 150 (226)
T cd05311 89 --GTLKEALKGADVFIGVSRPGVV-KKEMIKKMAKDPIVF-ALANPV--P----EIWPEEAKEAGADIVATG 150 (226)
T ss_pred --CCHHHHHhcCCEEEeCCCCCCC-CHHHHHhhCCCCEEE-EeCCCC--C----cCCHHHHHHcCCcEEEeC
Confidence 2365677889999999975443 345556554444445 676332 1 2245667777885 5444
No 393
>PLN00203 glutamyl-tRNA reductase
Probab=96.67 E-value=0.016 Score=62.12 Aligned_cols=73 Identities=15% Similarity=0.242 Sum_probs=57.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+|+|+|+ |-+|+.++++|...|. .+|.++.|+.++.+.+.+++. ...+...+ .+++.+.+.++
T Consensus 266 ~kkVlVIGA-G~mG~~~a~~L~~~G~------~~V~V~nRs~era~~La~~~~-----g~~i~~~~---~~dl~~al~~a 330 (519)
T PLN00203 266 SARVLVIGA-GKMGKLLVKHLVSKGC------TKMVVVNRSEERVAALREEFP-----DVEIIYKP---LDEMLACAAEA 330 (519)
T ss_pred CCEEEEEeC-HHHHHHHHHHHHhCCC------CeEEEEeCCHHHHHHHHHHhC-----CCceEeec---HhhHHHHHhcC
Confidence 468999999 9999999999998872 479999999999998887662 22222222 34567788899
Q ss_pred cEEeecCC
Q 012947 90 KLLLNCVG 97 (452)
Q Consensus 90 dvVIn~aG 97 (452)
|+||+|.+
T Consensus 331 DVVIsAT~ 338 (519)
T PLN00203 331 DVVFTSTS 338 (519)
T ss_pred CEEEEccC
Confidence 99999875
No 394
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=96.66 E-value=0.015 Score=61.81 Aligned_cols=119 Identities=18% Similarity=0.185 Sum_probs=77.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+++|+|+ |.+|+.++..|++.| .++.+.+|+.++.+++.+.+. ... .+..+ +.. +.++
T Consensus 332 ~k~vlIiGa-GgiG~aia~~L~~~G-------~~V~i~~R~~~~~~~la~~~~------~~~--~~~~~---~~~-l~~~ 391 (477)
T PRK09310 332 NQHVAIVGA-GGAAKAIATTLARAG-------AELLIFNRTKAHAEALASRCQ------GKA--FPLES---LPE-LHRI 391 (477)
T ss_pred CCEEEEEcC-cHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHHHHhc------cce--echhH---hcc-cCCC
Confidence 468999996 899999999999988 789999999999888776542 111 12222 222 4689
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhc
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQW 167 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~ 167 (452)
|+||||...... +.+ ... ...+|+...+.-+. +-+.|++.|+.++++. +|..+.+..++
T Consensus 392 DiVInatP~g~~----~~~-~l~--~~v~D~~Y~P~~T~-----ll~~A~~~G~~~~~G~-------~Ml~~Qa~~~f 450 (477)
T PRK09310 392 DIIINCLPPSVT----IPK-AFP--PCVVDINTLPKHSP-----YTQYARSQGSSIIYGY-------EMFAEQALLQF 450 (477)
T ss_pred CEEEEcCCCCCc----chh-HHh--hhEEeccCCCCCCH-----HHHHHHHCcCEEECcH-------HHHHHHHHHHH
Confidence 999999853321 211 111 25778876554322 3466788898887654 45555554444
No 395
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=96.64 E-value=0.013 Score=61.53 Aligned_cols=72 Identities=15% Similarity=0.207 Sum_probs=56.5
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
...+++|+|+ |-+|+.++++|...|. .++.+++|+.++++.+.++++ ... .+.+++.+.+.+
T Consensus 181 ~~~~vlViGa-G~iG~~~a~~L~~~G~------~~V~v~~r~~~ra~~la~~~g------~~~-----~~~~~~~~~l~~ 242 (423)
T PRK00045 181 SGKKVLVIGA-GEMGELVAKHLAEKGV------RKITVANRTLERAEELAEEFG------GEA-----IPLDELPEALAE 242 (423)
T ss_pred cCCEEEEECc-hHHHHHHHHHHHHCCC------CeEEEEeCCHHHHHHHHHHcC------CcE-----eeHHHHHHHhcc
Confidence 3468999997 9999999999998872 389999999999988887663 111 123566777889
Q ss_pred ccEEeecCCC
Q 012947 89 TKLLLNCVGP 98 (452)
Q Consensus 89 ~dvVIn~aGp 98 (452)
+|+||+|.|.
T Consensus 243 aDvVI~aT~s 252 (423)
T PRK00045 243 ADIVISSTGA 252 (423)
T ss_pred CCEEEECCCC
Confidence 9999999863
No 396
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional
Probab=96.63 E-value=0.0069 Score=61.56 Aligned_cols=99 Identities=16% Similarity=0.163 Sum_probs=63.5
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceE---EEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH
Q 012947 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKS---LALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHR 84 (452)
Q Consensus 8 ~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~---v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~ 84 (452)
.+.++|-|+||||++|+.+++.|.++.. +. +.++....+.-+.+ .+. .. ....-++ |+++
T Consensus 3 ~~~~~VaIvGATG~vG~ell~lL~~h~~------f~v~~l~~~aS~~saGk~~--~~~----~~-~l~v~~~-~~~~--- 65 (347)
T PRK06728 3 EKGYHVAVVGATGAVGQKIIELLEKETK------FNIAEVTLLSSKRSAGKTV--QFK----GR-EIIIQEA-KINS--- 65 (347)
T ss_pred CCCCEEEEEeCCCHHHHHHHHHHHHCCC------CCcccEEEEECcccCCCCe--eeC----Cc-ceEEEeC-CHHH---
Confidence 3568999999999999999999997642 33 44444322211111 121 11 2333333 4333
Q ss_pred HHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHH
Q 012947 85 LCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEF 126 (452)
Q Consensus 85 ~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~ 126 (452)
++++|+|+.+++.- ....++..+.+.|+..||+++...+
T Consensus 66 -~~~~Divf~a~~~~--~s~~~~~~~~~~G~~VID~Ss~fR~ 104 (347)
T PRK06728 66 -FEGVDIAFFSAGGE--VSRQFVNQAVSSGAIVIDNTSEYRM 104 (347)
T ss_pred -hcCCCEEEECCChH--HHHHHHHHHHHCCCEEEECchhhcC
Confidence 36899999998532 3467777788899999999986543
No 397
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=96.62 E-value=0.01 Score=55.80 Aligned_cols=69 Identities=14% Similarity=0.194 Sum_probs=51.0
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec-ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR-NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR-~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
+++.+||+|-+|..+++.|++.+ ++|.+..| .+++++...+.+.. . + ...+...+++.+|
T Consensus 2 ~~~~i~GtGniG~alA~~~a~ag-------~eV~igs~r~~~~~~a~a~~l~~----~---i-----~~~~~~dA~~~aD 62 (211)
T COG2085 2 MIIAIIGTGNIGSALALRLAKAG-------HEVIIGSSRGPKALAAAAAALGP----L---I-----TGGSNEDAAALAD 62 (211)
T ss_pred cEEEEeccChHHHHHHHHHHhCC-------CeEEEecCCChhHHHHHHHhhcc----c---c-----ccCChHHHHhcCC
Confidence 45666778999999999999998 79999965 55566666666531 1 1 1244567788999
Q ss_pred EEeecCCCCC
Q 012947 91 LLLNCVGPYR 100 (452)
Q Consensus 91 vVIn~aGp~~ 100 (452)
+||-++ ||.
T Consensus 63 VVvLAV-P~~ 71 (211)
T COG2085 63 VVVLAV-PFE 71 (211)
T ss_pred EEEEec-cHH
Confidence 999988 554
No 398
>PRK08655 prephenate dehydrogenase; Provisional
Probab=96.62 E-value=0.014 Score=61.48 Aligned_cols=91 Identities=15% Similarity=0.221 Sum_probs=64.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
++|.|+||+|.+|..+++.|.+.+ ++|.+.+|+.++.++...+++ +. . . .+..+.++++|
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G-------~~V~v~~r~~~~~~~~a~~~g------v~--~--~---~~~~e~~~~aD 60 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKG-------FEVIVTGRDPKKGKEVAKELG------VE--Y--A---NDNIDAAKDAD 60 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCC-------CEEEEEECChHHHHHHHHHcC------Ce--e--c---cCHHHHhccCC
Confidence 479999999999999999999988 789999999888766665442 11 1 1 22455678899
Q ss_pred EEeecCCCCCCCCHHHHHHHH---HhCCcEEEecCc
Q 012947 91 LLLNCVGPYRLHGDPVAAACV---HSGCDYLDISGE 123 (452)
Q Consensus 91 vVIn~aGp~~~~~~~vv~ac~---~~g~~yvDlsge 123 (452)
+||-|+.+... ..+++... ..++..+|+++.
T Consensus 61 vVIlavp~~~~--~~vl~~l~~~l~~~~iViDvsSv 94 (437)
T PRK08655 61 IVIISVPINVT--EDVIKEVAPHVKEGSLLMDVTSV 94 (437)
T ss_pred EEEEecCHHHH--HHHHHHHHhhCCCCCEEEEcccc
Confidence 99999854322 33444333 345678999874
No 399
>PRK08040 putative semialdehyde dehydrogenase; Provisional
Probab=96.61 E-value=0.0035 Score=63.50 Aligned_cols=99 Identities=19% Similarity=0.212 Sum_probs=62.7
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 8 ~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
.+.++|.|+||||++|+.+.+.|.++.. |..++..+..+.+.-+.+. +. .. ....-|++ . ..++
T Consensus 2 ~~~~~vaIvGATG~vG~ellrlL~~~~h----P~~~l~~laS~~saG~~~~--~~----~~-~~~v~~~~---~--~~~~ 65 (336)
T PRK08040 2 SEGWNIALLGATGAVGEALLELLAERQF----PVGELYALASEESAGETLR--FG----GK-SVTVQDAA---E--FDWS 65 (336)
T ss_pred CCCCEEEEEccCCHHHHHHHHHHhcCCC----CceEEEEEEccCcCCceEE--EC----Cc-ceEEEeCc---h--hhcc
Confidence 4678999999999999999999998532 2256655543322111111 11 11 11111322 1 1236
Q ss_pred CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcH
Q 012947 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEP 124 (452)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~ 124 (452)
++|+|+.+++.- ....++....+.|+..||+++..
T Consensus 66 ~~Dvvf~a~p~~--~s~~~~~~~~~~g~~VIDlS~~f 100 (336)
T PRK08040 66 QAQLAFFVAGRE--ASAAYAEEATNAGCLVIDSSGLF 100 (336)
T ss_pred CCCEEEECCCHH--HHHHHHHHHHHCCCEEEECChHh
Confidence 799999998532 33577777788899999999865
No 400
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.60 E-value=0.013 Score=56.30 Aligned_cols=34 Identities=18% Similarity=0.173 Sum_probs=28.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN 50 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~ 50 (452)
+.+|+|+|. |.+|..+++.|++.|. -++.+++.+
T Consensus 11 ~~~VlVvG~-GGvGs~va~~Lar~GV------g~i~LvD~D 44 (231)
T cd00755 11 NAHVAVVGL-GGVGSWAAEALARSGV------GKLTLIDFD 44 (231)
T ss_pred CCCEEEECC-CHHHHHHHHHHHHcCC------CEEEEECCC
Confidence 467999998 7799999999999984 477777754
No 401
>PRK13301 putative L-aspartate dehydrogenase; Provisional
Probab=96.59 E-value=0.03 Score=54.60 Aligned_cols=118 Identities=18% Similarity=0.179 Sum_probs=76.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEE-EEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-HcC
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQ 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v-~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~-~~~ 88 (452)
++|.|+|. |.||+.+++.|.+.... .+++ .+.+|+.++.+++.+. +. . + .+++++ ..+
T Consensus 3 ~rvgiIG~-GaIG~~va~~l~~~~~~----~~~l~~V~~~~~~~~~~~~~~--------~~--~--~---~~l~~ll~~~ 62 (267)
T PRK13301 3 HRIAFIGL-GAIASDVAAGLLADAAQ----PCQLAALTRNAADLPPALAGR--------VA--L--L---DGLPGLLAWR 62 (267)
T ss_pred eEEEEECc-cHHHHHHHHHHhcCCCC----ceEEEEEecCCHHHHHHhhcc--------Cc--c--c---CCHHHHhhcC
Confidence 57889886 99999999998765321 1444 4456666666554331 11 1 2 235554 578
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCC
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACG 150 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G 150 (452)
+|+||-|||+-.. ......++++|.+.+=+|--...-..+.+++.+.|++.|..|.-.+|
T Consensus 63 ~DlVVE~A~~~av--~e~~~~iL~~g~dlvv~SvGALaD~~~~~~l~~~A~~~g~~i~ipSG 122 (267)
T PRK13301 63 PDLVVEAAGQQAI--AEHAEGCLTAGLDMIICSAGALADDALRARLIAAAEAGGARIRVPAG 122 (267)
T ss_pred CCEEEECCCHHHH--HHHHHHHHhcCCCEEEEChhHhcCHHHHHHHHHHHHhCCCEEEEeCh
Confidence 9999999987443 45667788899998888732222233445567888888877554444
No 402
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=96.55 E-value=0.11 Score=53.46 Aligned_cols=124 Identities=15% Similarity=0.165 Sum_probs=78.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEE--ecChhHHHHHHHHhCCCCCCCccEEEEeCC-----------
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA--GRNPTRVKQALQWASPSHSLSIPILTADTT----------- 77 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~ia--gR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~----------- 77 (452)
.+|.|+|+||.||+...+-+.++.. .++|..+ ++|.+++.+..++++. +. ++..|-.
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~-----~f~VvaLaa~~n~~~l~~q~~~f~p----~~-v~i~~~~~~~~l~~~l~~ 71 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPD-----RFRVVALSAGKNVELLAEQAREFRP----KY-VVVADEEAAKELKEALAA 71 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCcc-----ccEEEEEEcCCCHHHHHHHHHHhCC----CE-EEEcCHHHHHHHHHhhcc
Confidence 4799999999999999988876541 1565443 7899999999888752 11 1112211
Q ss_pred -------CHHHHHHHHc--CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcC
Q 012947 78 -------DPPSLHRLCS--QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSA 148 (452)
Q Consensus 78 -------d~~sl~~~~~--~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~ 148 (452)
-++.+.++++ ++|+|+++.+-+ .|....-+|+++|.+..=.+=|... ..-....+.+++.|+.|++-
T Consensus 72 ~~~~v~~G~~~~~~l~~~~~vD~Vv~Ai~G~--aGl~ptl~Ai~aGK~VaLANKEslV--~aG~~i~~~a~~~g~~i~PV 147 (385)
T PRK05447 72 AGIEVLAGEEGLCELAALPEADVVVAAIVGA--AGLLPTLAAIRAGKRIALANKESLV--CAGELVMDAAKKSGAQILPV 147 (385)
T ss_pred CCceEEEChhHHHHHhcCCCCCEEEEeCcCc--ccHHHHHHHHHCCCcEEEeCHHHHH--hhHHHHHHHHHHcCCeEEEE
Confidence 2345556655 469999987543 3345566788999775533333222 21234456677788888765
No 403
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=96.53 E-value=0.014 Score=60.69 Aligned_cols=104 Identities=18% Similarity=0.151 Sum_probs=67.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-------------------hhHHHHHHHHhCC-CCCCC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASP-SHSLS 68 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-------------------~~kl~~l~~~l~~-~~~~~ 68 (452)
+..+|+|+|+ |.+|..++++|++.|. -++.+++.+ ..|.+.+.+.+.. ....+
T Consensus 41 ~~~~VlviG~-GGlGs~va~~La~~Gv------g~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~ 113 (392)
T PRK07878 41 KNARVLVIGA-GGLGSPTLLYLAAAGV------GTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVN 113 (392)
T ss_pred hcCCEEEECC-CHHHHHHHHHHHHcCC------CeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcE
Confidence 3567999998 7789999999999984 356665543 1233333333321 11223
Q ss_pred ccEEEEeCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEec
Q 012947 69 IPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 69 v~~v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDls 121 (452)
+..+...++ .+.+.++++++|+||.|..-+. ....+.++|.+.++.+|...
T Consensus 114 i~~~~~~i~-~~~~~~~~~~~D~Vvd~~d~~~-~r~~ln~~~~~~~~p~v~~~ 164 (392)
T PRK07878 114 VRLHEFRLD-PSNAVELFSQYDLILDGTDNFA-TRYLVNDAAVLAGKPYVWGS 164 (392)
T ss_pred EEEEeccCC-hhHHHHHHhcCCEEEECCCCHH-HHHHHHHHHHHcCCCEEEEE
Confidence 344444554 3567788899999999875432 22456788888888887654
No 404
>PRK07340 ornithine cyclodeaminase; Validated
Probab=96.53 E-value=0.0039 Score=62.43 Aligned_cols=102 Identities=12% Similarity=0.143 Sum_probs=72.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+++|+|+ |..|+..++.+....+ ..++.+.+|+.++.+++.+++.. ..+.+. . +++++++.++
T Consensus 125 ~~~v~IiGa-G~qa~~~~~al~~~~~-----~~~v~v~~r~~~~a~~~a~~~~~---~~~~~~---~---~~~~~av~~a 189 (304)
T PRK07340 125 PGDLLLIGT-GVQARAHLEAFAAGLP-----VRRVWVRGRTAASAAAFCAHARA---LGPTAE---P---LDGEAIPEAV 189 (304)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHhCC-----CCEEEEEcCCHHHHHHHHHHHHh---cCCeeE---E---CCHHHHhhcC
Confidence 457999997 9999999999986432 15899999999999999988742 122322 2 3456777899
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHH
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERM 130 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~ 130 (452)
|+||+|.... +|+++..++.|+|..-+....+..+++
T Consensus 190 DiVitaT~s~----~Pl~~~~~~~g~hi~~iGs~~p~~~El 226 (304)
T PRK07340 190 DLVVTATTSR----TPVYPEAARAGRLVVAVGAFTPDMAEL 226 (304)
T ss_pred CEEEEccCCC----CceeCccCCCCCEEEecCCCCCCcccC
Confidence 9999987532 456666567788877776655555543
No 405
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=96.52 E-value=0.0056 Score=52.46 Aligned_cols=98 Identities=12% Similarity=0.173 Sum_probs=58.2
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEE-ecChhHHHHHHHHhCCCCCCCcc-EEEEeCCCHHHHHHHHcCc
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA-GRNPTRVKQALQWASPSHSLSIP-ILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~ia-gR~~~kl~~l~~~l~~~~~~~v~-~v~~Dl~d~~sl~~~~~~~ 89 (452)
++.|+|++|.+|+.+++.|.+... +++..+ +|+.++.+.+.... +++. ++..+++ .+.++ ..++
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~~~------~~l~av~~~~~~~~~~~~~~~-----~~~~~~~~~~~~-~~~~~--~~~~ 66 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPD------FEVVALAASARSAGKRVSEAG-----PHLKGEVVLELE-PEDFE--ELAV 66 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcCCC------ceEEEEEechhhcCcCHHHHC-----cccccccccccc-cCChh--hcCC
Confidence 478999999999999999988631 555544 66554443333322 1221 1122222 12333 2589
Q ss_pred cEEeecCCCCCCCCHHH---HHHHHHhCCcEEEecCcHH
Q 012947 90 KLLLNCVGPYRLHGDPV---AAACVHSGCDYLDISGEPE 125 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~v---v~ac~~~g~~yvDlsge~~ 125 (452)
|+||.|.++-.. ..+ +..+.+.|...||+++...
T Consensus 67 DvV~~~~~~~~~--~~~~~~~~~~~~~g~~viD~s~~~~ 103 (122)
T smart00859 67 DIVFLALPHGVS--KEIAPLLPKAAEAGVKVIDLSSAFR 103 (122)
T ss_pred CEEEEcCCcHHH--HHHHHHHHhhhcCCCEEEECCcccc
Confidence 999999865322 221 2344577888888887543
No 406
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=96.52 E-value=0.016 Score=54.23 Aligned_cols=101 Identities=13% Similarity=0.193 Sum_probs=57.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-------------------hhHHHHHHHHhCC-CCCCCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASP-SHSLSI 69 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-------------------~~kl~~l~~~l~~-~~~~~v 69 (452)
..+|+|.|++| +|..+++.|+..|. -++.+++.+ ..|.+.+.+.+.. ....++
T Consensus 21 ~s~VlIiG~gg-lG~evak~La~~GV------g~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i 93 (197)
T cd01492 21 SARILLIGLKG-LGAEIAKNLVLSGI------GSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKV 93 (197)
T ss_pred hCcEEEEcCCH-HHHHHHHHHHHcCC------CEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEE
Confidence 46799999855 99999999999984 467777643 1233333333321 112233
Q ss_pred cEEEEeCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEe
Q 012947 70 PILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDI 120 (452)
Q Consensus 70 ~~v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDl 120 (452)
+.+...++ +...+.+++.|+||.|..+.. .-..+-+.|.+.++.+|..
T Consensus 94 ~~~~~~~~--~~~~~~~~~~dvVi~~~~~~~-~~~~ln~~c~~~~ip~i~~ 141 (197)
T cd01492 94 SVDTDDIS--EKPEEFFSQFDVVVATELSRA-ELVKINELCRKLGVKFYAT 141 (197)
T ss_pred EEEecCcc--ccHHHHHhCCCEEEECCCCHH-HHHHHHHHHHHcCCCEEEE
Confidence 33333343 224556778888888765422 1134555666655554443
No 407
>PRK08618 ornithine cyclodeaminase; Validated
Probab=96.51 E-value=0.011 Score=59.87 Aligned_cols=102 Identities=12% Similarity=0.142 Sum_probs=70.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..++.|+|+ |.+|+..++.++.... .-++.+.+|++++.+++.+++.. ...+.+.. ++| +++++.++
T Consensus 127 ~~~v~iiGa-G~~a~~~~~al~~~~~-----~~~v~v~~r~~~~a~~~~~~~~~--~~~~~~~~--~~~---~~~~~~~a 193 (325)
T PRK08618 127 AKTLCLIGT-GGQAKGQLEAVLAVRD-----IERVRVYSRTFEKAYAFAQEIQS--KFNTEIYV--VNS---ADEAIEEA 193 (325)
T ss_pred CcEEEEECC-cHHHHHHHHHHHhcCC-----ccEEEEECCCHHHHHHHHHHHHH--hcCCcEEE--eCC---HHHHHhcC
Confidence 457999997 7889999888765421 15899999999999998887742 11233333 233 56777899
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHH
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFME 128 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~ 128 (452)
|+||+|..-. .++++.+++.|+|.+-+....+..+
T Consensus 194 DiVi~aT~s~----~p~i~~~l~~G~hV~~iGs~~p~~~ 228 (325)
T PRK08618 194 DIIVTVTNAK----TPVFSEKLKKGVHINAVGSFMPDMQ 228 (325)
T ss_pred CEEEEccCCC----CcchHHhcCCCcEEEecCCCCcccc
Confidence 9999987422 3444478889999777755444433
No 408
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=96.51 E-value=0.022 Score=59.62 Aligned_cols=70 Identities=16% Similarity=0.238 Sum_probs=56.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+++|+|+ |-+|+.++++|...|. .++.+++|+.++++++.++++. ..+ +.+++.+.+.++
T Consensus 180 ~~~VlViGa-G~iG~~~a~~L~~~G~------~~V~v~~rs~~ra~~la~~~g~------~~i-----~~~~l~~~l~~a 241 (417)
T TIGR01035 180 GKKALLIGA-GEMGELVAKHLLRKGV------GKILIANRTYERAEDLAKELGG------EAV-----KFEDLEEYLAEA 241 (417)
T ss_pred CCEEEEECC-hHHHHHHHHHHHHCCC------CEEEEEeCCHHHHHHHHHHcCC------eEe-----eHHHHHHHHhhC
Confidence 468999997 9999999999998873 5899999999998888776631 111 234677888899
Q ss_pred cEEeecCC
Q 012947 90 KLLLNCVG 97 (452)
Q Consensus 90 dvVIn~aG 97 (452)
|+||+|.|
T Consensus 242 DvVi~aT~ 249 (417)
T TIGR01035 242 DIVISSTG 249 (417)
T ss_pred CEEEECCC
Confidence 99999986
No 409
>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou
Probab=96.51 E-value=0.018 Score=55.41 Aligned_cols=102 Identities=9% Similarity=0.100 Sum_probs=63.6
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh-------------------hHHHHHHHHhCC-CCCCCccE
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-------------------TRVKQALQWASP-SHSLSIPI 71 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~-------------------~kl~~l~~~l~~-~~~~~v~~ 71 (452)
+|+|.|+ |.+|..+++.|+..|- -++.+++.+. .|.+.+.+.+.. ....++..
T Consensus 1 kVlvvG~-GGlG~eilk~La~~Gv------g~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~ 73 (234)
T cd01484 1 KVLLVGA-GGIGCELLKNLALMGF------GQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVP 73 (234)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCC------CeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEE
Confidence 4889997 7899999999999984 4677766542 233333333321 11233445
Q ss_pred EEEeCCCHHHH-HHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEec
Q 012947 72 LTADTTDPPSL-HRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 72 v~~Dl~d~~sl-~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDls 121 (452)
+..++.+.+.. ...+++.|+||++..-.. ....+-+.|...++.+||..
T Consensus 74 ~~~~i~~~~~~~~~f~~~~DvVi~a~Dn~~-aR~~ln~~c~~~~iplI~~g 123 (234)
T cd01484 74 YQNKVGPEQDFNDTFFEQFHIIVNALDNII-ARRYVNGMLIFLIVPLIESG 123 (234)
T ss_pred EeccCChhhhchHHHHhCCCEEEECCCCHH-HHHHHHHHHHHcCCCEEEEc
Confidence 55566543333 467889999999875332 12456677777777777653
No 410
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.50 E-value=0.047 Score=54.80 Aligned_cols=128 Identities=16% Similarity=0.246 Sum_probs=81.0
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC--CCC--CCccEEEEeCCCHHHHHHHHc
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SHS--LSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~--~~~--~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
+|.|+|| |.+|..++-.|+..+-. -++++.++++++++....++.. ... .++.+. . .| .+.++
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~~~-----~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~-~--~~----y~~~~ 67 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALGLF-----SEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIR-A--GD----YDDCA 67 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCCC-----CEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEE-E--CC----HHHhC
Confidence 5889999 99999999999987621 3799999999888777776642 101 122333 2 23 45688
Q ss_pred CccEEeecCCCCCCCCHH--HHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhh
Q 012947 88 QTKLLLNCVGPYRLHGDP--VAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSR 165 (452)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~--vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~ 165 (452)
++|+||-+||.....++. =.+.... ....++.+.+...+.+ -.++.|+- +-|-|+.+|.+.+
T Consensus 68 ~aDivvitaG~~~kpg~tr~R~dll~~----------N~~I~~~i~~~i~~~~-p~~i~ivv-----sNPvDv~t~~~~k 131 (307)
T cd05290 68 DADIIVITAGPSIDPGNTDDRLDLAQT----------NAKIIREIMGNITKVT-KEAVIILI-----TNPLDIAVYIAAT 131 (307)
T ss_pred CCCEEEECCCCCCCCCCCchHHHHHHH----------HHHHHHHHHHHHHHhC-CCeEEEEe-----cCcHHHHHHHHHH
Confidence 999999999975544421 0111111 1234445544444433 23444443 4688999999888
Q ss_pred hcC
Q 012947 166 QWI 168 (452)
Q Consensus 166 ~~~ 168 (452)
...
T Consensus 132 ~sg 134 (307)
T cd05290 132 EFD 134 (307)
T ss_pred HhC
Confidence 764
No 411
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.50 E-value=0.038 Score=55.51 Aligned_cols=83 Identities=18% Similarity=0.065 Sum_probs=55.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
++|.|+||+|.+|..++-.|+..+-. .++++.+++ +++....++.. ......+.... ..+++.+.++++|
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~-----~elvLiDi~--~a~g~alDL~~-~~~~~~i~~~~--~~~~~y~~~~daD 70 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLV-----SELALYDIV--NTPGVAADLSH-INTPAKVTGYL--GPEELKKALKGAD 70 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCC-----cEEEEEecC--ccceeehHhHh-CCCcceEEEec--CCCchHHhcCCCC
Confidence 48999999999999999998877621 479999998 55444444431 01112222111 1233667889999
Q ss_pred EEeecCCCCCCCC
Q 012947 91 LLLNCVGPYRLHG 103 (452)
Q Consensus 91 vVIn~aGp~~~~~ 103 (452)
+||-+||.-...+
T Consensus 71 ivvitaG~~~k~g 83 (310)
T cd01337 71 VVVIPAGVPRKPG 83 (310)
T ss_pred EEEEeCCCCCCCC
Confidence 9999999754443
No 412
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=96.49 E-value=0.018 Score=60.43 Aligned_cols=75 Identities=23% Similarity=0.272 Sum_probs=63.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHH-HHcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHR-LCSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~-~~~~ 88 (452)
+.+++|+|+ |.+|+.+++.|.+.+ .++.++++++++.+++.++. .++.++.+|.+|++.+++ -+++
T Consensus 231 ~~~iiIiG~-G~~g~~l~~~L~~~~-------~~v~vid~~~~~~~~~~~~~-----~~~~~i~gd~~~~~~L~~~~~~~ 297 (453)
T PRK09496 231 VKRVMIVGG-GNIGYYLAKLLEKEG-------YSVKLIERDPERAEELAEEL-----PNTLVLHGDGTDQELLEEEGIDE 297 (453)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCC-------CeEEEEECCHHHHHHHHHHC-----CCCeEEECCCCCHHHHHhcCCcc
Confidence 467999998 999999999999887 78999999999988777653 356789999999999865 4678
Q ss_pred ccEEeecCC
Q 012947 89 TKLLLNCVG 97 (452)
Q Consensus 89 ~dvVIn~aG 97 (452)
+|.||.+.+
T Consensus 298 a~~vi~~~~ 306 (453)
T PRK09496 298 ADAFIALTN 306 (453)
T ss_pred CCEEEECCC
Confidence 999987764
No 413
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=96.49 E-value=0.0035 Score=60.11 Aligned_cols=80 Identities=16% Similarity=0.106 Sum_probs=55.0
Q ss_pred HHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc----CccEEeecCCCCCC
Q 012947 26 VVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS----QTKLLLNCVGPYRL 101 (452)
Q Consensus 26 va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~----~~dvVIn~aGp~~~ 101 (452)
+++.|+++| ++|++++|+.++++. ..++.+|++|.++++++++ ++|+||||||....
T Consensus 1 ~a~~l~~~G-------~~Vv~~~r~~~~~~~------------~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~ 61 (241)
T PRK12428 1 TARLLRFLG-------ARVIGVDRREPGMTL------------DGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGT 61 (241)
T ss_pred ChHHHHhCC-------CEEEEEeCCcchhhh------------hHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCC
Confidence 478888888 799999999876421 2356899999999999887 47999999996532
Q ss_pred CCHHHHHHHHHhCCcEEEecCcHHHHHHHHH
Q 012947 102 HGDPVAAACVHSGCDYLDISGEPEFMERMEA 132 (452)
Q Consensus 102 ~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~ 132 (452)
.. .+ .+.-+++.+....++.+.+
T Consensus 62 ~~---~~-----~~~~vN~~~~~~l~~~~~~ 84 (241)
T PRK12428 62 AP---VE-----LVARVNFLGLRHLTEALLP 84 (241)
T ss_pred CC---HH-----HhhhhchHHHHHHHHHHHH
Confidence 11 11 1223455565555555543
No 414
>PRK14851 hypothetical protein; Provisional
Probab=96.48 E-value=0.016 Score=63.98 Aligned_cols=105 Identities=11% Similarity=0.103 Sum_probs=71.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-------------------hhHHHHHHHHhCC-CCCCC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASP-SHSLS 68 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-------------------~~kl~~l~~~l~~-~~~~~ 68 (452)
++.+|+|.|+ |++|..+++.|++.|- -++.+++-+ ..|.+.+.+.+.. ....+
T Consensus 42 ~~~~VlIvG~-GGlGs~va~~Lar~GV------G~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~ 114 (679)
T PRK14851 42 AEAKVAIPGM-GGVGGVHLITMVRTGI------GRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLE 114 (679)
T ss_pred hcCeEEEECc-CHHHHHHHHHHHHhCC------CeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCe
Confidence 3568999997 7899999999999984 356666543 1233333333321 12334
Q ss_pred ccEEEEeCCCHHHHHHHHcCccEEeecCCCCCC-CCHHHHHHHHHhCCcEEEec
Q 012947 69 IPILTADTTDPPSLHRLCSQTKLLLNCVGPYRL-HGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 69 v~~v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~-~~~~vv~ac~~~g~~yvDls 121 (452)
+..+...++ ++.+.++++++|+||+|.-.+.. ....+.+.|.+.++.+|+..
T Consensus 115 I~~~~~~i~-~~n~~~~l~~~DvVid~~D~~~~~~r~~l~~~c~~~~iP~i~~g 167 (679)
T PRK14851 115 ITPFPAGIN-ADNMDAFLDGVDVVLDGLDFFQFEIRRTLFNMAREKGIPVITAG 167 (679)
T ss_pred EEEEecCCC-hHHHHHHHhCCCEEEECCCCCcHHHHHHHHHHHHHCCCCEEEee
Confidence 555556665 57789999999999999854321 12468889999998888654
No 415
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=96.47 E-value=0.018 Score=57.06 Aligned_cols=111 Identities=21% Similarity=0.275 Sum_probs=70.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
++|.|+|. |.+|+.+++.|++.+ ++|.+.+|+.++.+++.+. .+. . . .+.+++++++|
T Consensus 3 ~~IgviG~-G~mG~~~a~~l~~~g-------~~v~~~d~~~~~~~~~~~~-------g~~--~--~---~~~~e~~~~~d 60 (296)
T PRK11559 3 MKVGFIGL-GIMGKPMSKNLLKAG-------YSLVVYDRNPEAVAEVIAA-------GAE--T--A---STAKAVAEQCD 60 (296)
T ss_pred ceEEEEcc-CHHHHHHHHHHHHCC-------CeEEEEcCCHHHHHHHHHC-------CCe--e--c---CCHHHHHhcCC
Confidence 47999985 999999999999987 7899999999988765541 111 1 1 23456678999
Q ss_pred EEeecCCCCCCCCHHHH------HHHHHhCCcEEEecCcHHHH-HHHHHHHHHHHHhCccEEEcC
Q 012947 91 LLLNCVGPYRLHGDPVA------AACVHSGCDYLDISGEPEFM-ERMEARYHEKAVETGSLLVSA 148 (452)
Q Consensus 91 vVIn~aGp~~~~~~~vv------~ac~~~g~~yvDlsge~~~~-~~~~~~~~~~A~~~gv~iv~~ 148 (452)
+||-|+.... .-..++ ......+..+||++...+-. +++ .+..++.|+.++.+
T Consensus 61 ~vi~~vp~~~-~~~~v~~~~~~~~~~~~~g~iiid~st~~~~~~~~l----~~~~~~~g~~~~d~ 120 (296)
T PRK11559 61 VIITMLPNSP-HVKEVALGENGIIEGAKPGTVVIDMSSIAPLASREI----AAALKAKGIEMLDA 120 (296)
T ss_pred EEEEeCCCHH-HHHHHHcCcchHhhcCCCCcEEEECCCCCHHHHHHH----HHHHHHcCCcEEEc
Confidence 9999984321 111222 11224466789988765532 333 33344456665544
No 416
>PRK07411 hypothetical protein; Validated
Probab=96.46 E-value=0.016 Score=60.14 Aligned_cols=103 Identities=10% Similarity=0.065 Sum_probs=68.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-------------------hhHHHHHHHHhCC-CCCCCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASP-SHSLSI 69 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-------------------~~kl~~l~~~l~~-~~~~~v 69 (452)
..+|+|+|+ |.+|..++++|++.|. -++.+++.+ ..|.+.+.+.+.. ....++
T Consensus 38 ~~~VlivG~-GGlG~~va~~La~~Gv------g~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v 110 (390)
T PRK07411 38 AASVLCIGT-GGLGSPLLLYLAAAGI------GRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQV 110 (390)
T ss_pred cCcEEEECC-CHHHHHHHHHHHHcCC------CEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeE
Confidence 467999998 6789999999999984 356665543 1233344444422 122344
Q ss_pred cEEEEeCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEec
Q 012947 70 PILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 70 ~~v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDls 121 (452)
..+...++ ++...+.++++|+||.|...+.. -..+.++|.+.++.+|..+
T Consensus 111 ~~~~~~~~-~~~~~~~~~~~D~Vvd~~d~~~~-r~~ln~~~~~~~~p~v~~~ 160 (390)
T PRK07411 111 DLYETRLS-SENALDILAPYDVVVDGTDNFPT-RYLVNDACVLLNKPNVYGS 160 (390)
T ss_pred EEEecccC-HHhHHHHHhCCCEEEECCCCHHH-HHHHHHHHHHcCCCEEEEE
Confidence 44544554 35677889999999999875532 2457789999988877553
No 417
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=96.44 E-value=0.032 Score=53.01 Aligned_cols=96 Identities=19% Similarity=0.163 Sum_probs=67.5
Q ss_pred CCeEEEEcCC--chHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 10 LFDVIILGAS--GFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 10 ~~~ilV~GAT--G~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
..+++|+|-. --|+-.|++.|.++| .+++....++ ++++-++++.. ......++.||++|.++++++++
T Consensus 6 GK~~lI~Gvan~rSIAwGIAk~l~~~G-------AeL~fTy~~e-~l~krv~~la~-~~~s~~v~~cDV~~d~~i~~~f~ 76 (259)
T COG0623 6 GKRILIMGVANNRSIAWGIAKALAEQG-------AELAFTYQGE-RLEKRVEELAE-ELGSDLVLPCDVTNDESIDALFA 76 (259)
T ss_pred CceEEEEEecccccHHHHHHHHHHHcC-------CEEEEEeccH-HHHHHHHHHHh-hccCCeEEecCCCCHHHHHHHHH
Confidence 3578999865 358999999999999 7888888766 55444444432 11234678999999999998887
Q ss_pred -------CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCc
Q 012947 88 -------QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGE 123 (452)
Q Consensus 88 -------~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge 123 (452)
..|.|||+.+..... +..-+|+|++-|
T Consensus 77 ~i~~~~g~lD~lVHsIaFa~k~---------el~G~~~dtsre 110 (259)
T COG0623 77 TIKKKWGKLDGLVHSIAFAPKE---------ELKGDYLDTSRE 110 (259)
T ss_pred HHHHhhCcccEEEEEeccCChH---------HhCCcccccCHH
Confidence 469999999733211 223468885543
No 418
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=96.43 E-value=0.081 Score=52.76 Aligned_cols=112 Identities=17% Similarity=0.092 Sum_probs=68.4
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCccE
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~dv 91 (452)
+|.|+|. |-+|+.+++.|++.+ ++|.+.+|++++.+++.+ .+ +. . ..+++++.+.++.+|+
T Consensus 2 ~Ig~IGl-G~MG~~mA~~L~~~g-------~~v~v~dr~~~~~~~~~~-~g------~~--~--~~~~~e~~~~~~~~dv 62 (301)
T PRK09599 2 QLGMIGL-GRMGGNMARRLLRGG-------HEVVGYDRNPEAVEALAE-EG------AT--G--ADSLEELVAKLPAPRV 62 (301)
T ss_pred EEEEEcc-cHHHHHHHHHHHHCC-------CeEEEEECCHHHHHHHHH-CC------Ce--e--cCCHHHHHhhcCCCCE
Confidence 6888985 999999999999988 789999999999877654 21 11 1 2244444333334688
Q ss_pred EeecCCCCCCCCHHHHHHHH---HhCCcEEEecCcHH-HHHHHHHHHHHHHHhCccEEEc
Q 012947 92 LLNCVGPYRLHGDPVAAACV---HSGCDYLDISGEPE-FMERMEARYHEKAVETGSLLVS 147 (452)
Q Consensus 92 VIn~aGp~~~~~~~vv~ac~---~~g~~yvDlsge~~-~~~~~~~~~~~~A~~~gv~iv~ 147 (452)
||.++.+.. .-..+++.+. ..+..+||.+...+ ..+++ .+.+++.|+..+-
T Consensus 63 vi~~v~~~~-~~~~v~~~l~~~l~~g~ivid~st~~~~~~~~~----~~~~~~~g~~~~d 117 (301)
T PRK09599 63 VWLMVPAGE-ITDATIDELAPLLSPGDIVIDGGNSYYKDDIRR----AELLAEKGIHFVD 117 (301)
T ss_pred EEEEecCCc-HHHHHHHHHHhhCCCCCEEEeCCCCChhHHHHH----HHHHHHcCCEEEe
Confidence 888774321 1133333332 23455788754333 33332 3555666777663
No 419
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=96.43 E-value=0.034 Score=55.45 Aligned_cols=112 Identities=17% Similarity=0.071 Sum_probs=69.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
++|.|+|. |.+|..+++.|++.+ ++|.+.+|++++.+++.+.- .. ...+.+++.+.++++|
T Consensus 1 M~Ig~IGl-G~mG~~la~~L~~~g-------~~V~~~dr~~~~~~~l~~~g-------~~----~~~s~~~~~~~~~~~d 61 (298)
T TIGR00872 1 MQLGLIGL-GRMGANIVRRLAKRG-------HDCVGYDHDQDAVKAMKEDR-------TT----GVANLRELSQRLSAPR 61 (298)
T ss_pred CEEEEEcc-hHHHHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHcC-------Cc----ccCCHHHHHhhcCCCC
Confidence 36889986 999999999999988 79999999999988776521 11 1134555555666788
Q ss_pred EEeecCCCCCCCCHHHHHHHH---HhCCcEEEecCcH-HHHHHHHHHHHHHHHhCccEEEc
Q 012947 91 LLLNCVGPYRLHGDPVAAACV---HSGCDYLDISGEP-EFMERMEARYHEKAVETGSLLVS 147 (452)
Q Consensus 91 vVIn~aGp~~~~~~~vv~ac~---~~g~~yvDlsge~-~~~~~~~~~~~~~A~~~gv~iv~ 147 (452)
+||.|+-+. .-..+++... ..+..+||.+... .-..+. .+..++.|+..+-
T Consensus 62 vIi~~vp~~--~~~~v~~~l~~~l~~g~ivid~st~~~~~t~~~----~~~~~~~g~~~vd 116 (298)
T TIGR00872 62 VVWVMVPHG--IVDAVLEELAPTLEKGDIVIDGGNSYYKDSLRR----YKLLKEKGIHLLD 116 (298)
T ss_pred EEEEEcCch--HHHHHHHHHHhhCCCCCEEEECCCCCcccHHHH----HHHHHhcCCeEEe
Confidence 888877432 1133333322 2344577776543 222222 2334455666553
No 420
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=96.42 E-value=0.014 Score=56.67 Aligned_cols=97 Identities=12% Similarity=0.207 Sum_probs=71.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--C
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--Q 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--~ 88 (452)
|+|+|+|||+= |+.+++.|.+.+ . +.+..-..-.. ++... ......++.+-+.|.+.+.+.++ +
T Consensus 1 m~ILvlgGTtE-~r~la~~L~~~g-------~-v~~sv~t~~g~-~~~~~----~~~~~~v~~G~lg~~~~l~~~l~~~~ 66 (249)
T PF02571_consen 1 MKILVLGGTTE-GRKLAERLAEAG-------Y-VIVSVATSYGG-ELLKP----ELPGLEVRVGRLGDEEGLAEFLRENG 66 (249)
T ss_pred CEEEEEechHH-HHHHHHHHHhcC-------C-EEEEEEhhhhH-hhhcc----ccCCceEEECCCCCHHHHHHHHHhCC
Confidence 58999999975 999999999988 4 33333222221 11111 12356777887879999999996 7
Q ss_pred ccEEeecCCCCCC-CCHHHHHHHHHhCCcEEEec
Q 012947 89 TKLLLNCVGPYRL-HGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 89 ~dvVIn~aGp~~~-~~~~vv~ac~~~g~~yvDls 121 (452)
+++||+..-||.. -..++.++|.+.|+.|+-+-
T Consensus 67 i~~vIDATHPfA~~is~na~~a~~~~~ipylR~e 100 (249)
T PF02571_consen 67 IDAVIDATHPFAAEISQNAIEACRELGIPYLRFE 100 (249)
T ss_pred CcEEEECCCchHHHHHHHHHHHHhhcCcceEEEE
Confidence 8999999999864 34789999999999998774
No 421
>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2. UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.
Probab=96.40 E-value=0.018 Score=57.72 Aligned_cols=102 Identities=15% Similarity=0.213 Sum_probs=68.9
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-------------------hhHHHHHHHHhCC-CCCCCccE
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASP-SHSLSIPI 71 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-------------------~~kl~~l~~~l~~-~~~~~v~~ 71 (452)
+|+|.|+ |++|..+++.|+..|. -++.+++.+ ..|.+.+.+.+.. ....++..
T Consensus 1 kVlIVGa-GGlG~EiaKnLal~Gv------g~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~ 73 (312)
T cd01489 1 KVLVVGA-GGIGCELLKNLVLTGF------GEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVA 73 (312)
T ss_pred CEEEECC-CHHHHHHHHHHHHhcC------CeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEE
Confidence 5899998 8899999999999984 467776643 1233333333321 12234455
Q ss_pred EEEeCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEec
Q 012947 72 LTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 72 v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDls 121 (452)
+..++.+.....+.+++.|+||++.-.... ...+-+.|.+.++.+|+..
T Consensus 74 ~~~~i~~~~~~~~f~~~~DvVv~a~Dn~~a-r~~in~~c~~~~ip~I~~g 122 (312)
T cd01489 74 YHANIKDPDFNVEFFKQFDLVFNALDNLAA-RRHVNKMCLAADVPLIESG 122 (312)
T ss_pred EeccCCCccchHHHHhcCCEEEECCCCHHH-HHHHHHHHHHCCCCEEEEe
Confidence 556676644445788999999999864332 2568899999999999864
No 422
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=96.39 E-value=0.062 Score=45.37 Aligned_cols=109 Identities=24% Similarity=0.289 Sum_probs=73.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEE-EEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v-~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
++|.|+|+ |.+|+...+.+.+..+ ..++ .++++++++.+++.+.++ +. . .+| ++++++
T Consensus 1 i~v~iiG~-G~~g~~~~~~~~~~~~-----~~~v~~v~d~~~~~~~~~~~~~~------~~-~---~~~---~~~ll~~~ 61 (120)
T PF01408_consen 1 IRVGIIGA-GSIGRRHLRALLRSSP-----DFEVVAVCDPDPERAEAFAEKYG------IP-V---YTD---LEELLADE 61 (120)
T ss_dssp EEEEEEST-SHHHHHHHHHHHHTTT-----TEEEEEEECSSHHHHHHHHHHTT------SE-E---ESS---HHHHHHHT
T ss_pred CEEEEECC-cHHHHHHHHHHHhcCC-----CcEEEEEEeCCHHHHHHHHHHhc------cc-c---hhH---HHHHHHhh
Confidence 47899998 7779999999988853 1554 588999999988877663 23 2 223 566665
Q ss_pred CccEEeecCCCCCCCCHHHHHHHHHhCCc-EEEe--cCcHHHHHHHHHHHHHHHHhCccE
Q 012947 88 QTKLLLNCVGPYRLHGDPVAAACVHSGCD-YLDI--SGEPEFMERMEARYHEKAVETGSL 144 (452)
Q Consensus 88 ~~dvVIn~aGp~~~~~~~vv~ac~~~g~~-yvDl--sge~~~~~~~~~~~~~~A~~~gv~ 144 (452)
+.|+|+-+..+.. + ..++..|++.|.| +++= +-...-. .++.+.++++|+.
T Consensus 62 ~~D~V~I~tp~~~-h-~~~~~~~l~~g~~v~~EKP~~~~~~~~----~~l~~~a~~~~~~ 115 (120)
T PF01408_consen 62 DVDAVIIATPPSS-H-AEIAKKALEAGKHVLVEKPLALTLEEA----EELVEAAKEKGVK 115 (120)
T ss_dssp TESEEEEESSGGG-H-HHHHHHHHHTTSEEEEESSSSSSHHHH----HHHHHHHHHHTSC
T ss_pred cCCEEEEecCCcc-h-HHHHHHHHHcCCEEEEEcCCcCCHHHH----HHHHHHHHHhCCE
Confidence 7999998885533 2 6889999999996 4442 2222222 3445566666654
No 423
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=96.36 E-value=0.019 Score=54.59 Aligned_cols=76 Identities=16% Similarity=0.174 Sum_probs=52.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~-~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
++|.|+||+|.+|+.++..|++.+ ++|.+.+|++++++.+.+..... ....+... .-..+ ..+.++++
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G-------~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~-~~~~~---~~ea~~~a 69 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAG-------NKIIIGSRDLEKAEEAAAKALEELGHGGSDIK-VTGAD---NAEAAKRA 69 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCC-------CEEEEEEcCHHHHHHHHHHHHhhccccCCCce-EEEeC---hHHHHhcC
Confidence 479999999999999999999988 78999999999987776543100 00011100 11112 24557789
Q ss_pred cEEeecCC
Q 012947 90 KLLLNCVG 97 (452)
Q Consensus 90 dvVIn~aG 97 (452)
|+||-++-
T Consensus 70 DvVilavp 77 (219)
T TIGR01915 70 DVVILAVP 77 (219)
T ss_pred CEEEEECC
Confidence 99999884
No 424
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=96.33 E-value=0.018 Score=55.94 Aligned_cols=94 Identities=19% Similarity=0.257 Sum_probs=73.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--C
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS--Q 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~--~ 88 (452)
.+|+|+|||+= |+.+++.|.+.+ +++.+..-.+... . ....+.++.+-+.|.+++.+.++ +
T Consensus 3 ~~IlvlgGT~e-gr~la~~L~~~g-------~~v~~Svat~~g~---~------~~~~~~v~~G~l~~~~~l~~~l~~~~ 65 (248)
T PRK08057 3 PRILLLGGTSE-ARALARALAAAG-------VDIVLSLAGRTGG---P------ADLPGPVRVGGFGGAEGLAAYLREEG 65 (248)
T ss_pred ceEEEEechHH-HHHHHHHHHhCC-------CeEEEEEccCCCC---c------ccCCceEEECCCCCHHHHHHHHHHCC
Confidence 57999999975 999999999887 5555544333221 1 12356778888879999999997 7
Q ss_pred ccEEeecCCCCCCC-CHHHHHHHHHhCCcEEEec
Q 012947 89 TKLLLNCVGPYRLH-GDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 89 ~dvVIn~aGp~~~~-~~~vv~ac~~~g~~yvDls 121 (452)
+++||+..-||... ..++.++|.+.++.|+-+-
T Consensus 66 i~~VIDATHPfA~~is~~a~~ac~~~~ipyiR~e 99 (248)
T PRK08057 66 IDLVIDATHPYAAQISANAAAACRALGIPYLRLE 99 (248)
T ss_pred CCEEEECCCccHHHHHHHHHHHHHHhCCcEEEEe
Confidence 89999999998643 4789999999999999875
No 425
>PRK06153 hypothetical protein; Provisional
Probab=96.31 E-value=0.022 Score=58.40 Aligned_cols=101 Identities=17% Similarity=0.170 Sum_probs=64.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC----------------------hhHHHHHHHHhCCCCCC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN----------------------PTRVKQALQWASPSHSL 67 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~----------------------~~kl~~l~~~l~~~~~~ 67 (452)
..+|+|+|+ |++|..+++.|++.|. -++.+++-+ ..|.+.+.+.+.. ...
T Consensus 176 ~~~VaIVG~-GG~GS~Va~~LAR~GV------geI~LVD~D~Ve~SNLnRQ~gaf~~~DvGk~~~KVevaa~rl~~-in~ 247 (393)
T PRK06153 176 GQRIAIIGL-GGTGSYILDLVAKTPV------REIHLFDGDDFLQHNAFRSPGAASIEELREAPKKVDYFKSRYSN-MRR 247 (393)
T ss_pred hCcEEEEcC-CccHHHHHHHHHHcCC------CEEEEECCCEecccccccccccCCHhHcCCcchHHHHHHHHHHH-hCC
Confidence 468999998 7789999999999984 466665543 1344334333321 112
Q ss_pred CccEEEEeCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEec
Q 012947 68 SIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 68 ~v~~v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDls 121 (452)
++..+...+ +++.+. .+.++|+||.|+.-... ...+.+.|.+.++.+||+.
T Consensus 248 ~I~~~~~~I-~~~n~~-~L~~~DiV~dcvDn~~a-R~~ln~~a~~~gIP~Id~G 298 (393)
T PRK06153 248 GIVPHPEYI-DEDNVD-ELDGFTFVFVCVDKGSS-RKLIVDYLEALGIPFIDVG 298 (393)
T ss_pred eEEEEeecC-CHHHHH-HhcCCCEEEEcCCCHHH-HHHHHHHHHHcCCCEEEee
Confidence 344444445 556555 56889999998853221 1346677888777777764
No 426
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=96.25 E-value=0.024 Score=56.21 Aligned_cols=109 Identities=17% Similarity=0.193 Sum_probs=68.2
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCccE
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~dv 91 (452)
+|.|+|. |.+|..+++.|++.+ ++|.+.+|+.++.+++.+. + .. ...+..++++++|+
T Consensus 1 ~IgvIG~-G~mG~~iA~~l~~~G-------~~V~~~dr~~~~~~~~~~~-g------~~-------~~~~~~~~~~~aDi 58 (291)
T TIGR01505 1 KVGFIGL-GIMGSPMSINLAKAG-------YQLHVTTIGPEVADELLAA-G------AV-------TAETARQVTEQADV 58 (291)
T ss_pred CEEEEEe-cHHHHHHHHHHHHCC-------CeEEEEcCCHHHHHHHHHC-C------Cc-------ccCCHHHHHhcCCE
Confidence 3778875 999999999999988 7999999999988776542 1 11 11235677889999
Q ss_pred EeecCCCCCCCCHHHH---HHHH---HhCCcEEEecCcHHH-HHHHHHHHHHHHHhCccEEEc
Q 012947 92 LLNCVGPYRLHGDPVA---AACV---HSGCDYLDISGEPEF-MERMEARYHEKAVETGSLLVS 147 (452)
Q Consensus 92 VIn~aGp~~~~~~~vv---~ac~---~~g~~yvDlsge~~~-~~~~~~~~~~~A~~~gv~iv~ 147 (452)
||.|+... ..-..++ +.+. ..+..+||.+...+- .+++ .+..++.|+.++.
T Consensus 59 vi~~vp~~-~~~~~v~~~~~~~~~~~~~g~iivd~st~~~~~~~~l----~~~l~~~g~~~~~ 116 (291)
T TIGR01505 59 IFTMVPDS-PQVEEVAFGENGIIEGAKPGKTLVDMSSISPIESKRF----AKAVKEKGIDYLD 116 (291)
T ss_pred EEEecCCH-HHHHHHHcCcchHhhcCCCCCEEEECCCCCHHHHHHH----HHHHHHcCCCEEe
Confidence 99998431 1111121 1111 235568887655442 2233 3334445666664
No 427
>TIGR01761 thiaz-red thiazolinyl imide reductase. This reductase is found associated with gene clusters for the biosynthesis of various non-ribosomal peptide derived natural products in which cysteine is cyclized to a thiazoline ring containing an imide double bond. Examples include yersiniabactin (irp3/YbtU) and pyochelin (PchG).
Probab=96.25 E-value=0.049 Score=55.46 Aligned_cols=115 Identities=15% Similarity=0.209 Sum_probs=75.5
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceE-EEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKS-LALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~-v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
.+++|.|+|+ |+ |+.-++.+.+..+ + .+ +++++|+.++.+++.++++ +.. .+| ++++++
T Consensus 2 ~~~rVgViG~-~~-G~~h~~al~~~~~-~----~eLvaV~d~~~erA~~~A~~~g------i~~----y~~---~eell~ 61 (343)
T TIGR01761 2 DVQSVVVCGT-RF-GQFYLAAFAAAPE-R----FELAGILAQGSERSRALAHRLG------VPL----YCE---VEELPD 61 (343)
T ss_pred CCcEEEEEeH-HH-HHHHHHHHHhCCC-C----cEEEEEEcCCHHHHHHHHHHhC------CCc----cCC---HHHHhc
Confidence 3579999999 76 9888888876531 1 33 6778999999999988773 221 233 556666
Q ss_pred CccEEeecCCC--CCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEE
Q 012947 88 QTKLLLNCVGP--YRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLV 146 (452)
Q Consensus 88 ~~dvVIn~aGp--~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv 146 (452)
+.|+++-++.. .......++.+|+++|.|.+= |-++..+-..++-+.|+++|+.+.
T Consensus 62 d~Di~~V~ipt~~P~~~H~e~a~~aL~aGkHVL~---EKPla~~Ea~el~~~A~~~g~~l~ 119 (343)
T TIGR01761 62 DIDIACVVVRSAIVGGQGSALARALLARGIHVLQ---EHPLHPRDIQDLLRLAERQGRRYL 119 (343)
T ss_pred CCCEEEEEeCCCCCCccHHHHHHHHHhCCCeEEE---cCCCCHHHHHHHHHHHHHcCCEEE
Confidence 66655554421 112337899999999998541 323223334666778888888755
No 428
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=96.25 E-value=0.067 Score=52.95 Aligned_cols=106 Identities=16% Similarity=0.237 Sum_probs=69.5
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCccE
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~dv 91 (452)
+|-++| .|-.|..++.+|++.| +.+.+.+|+++|..+.+...+. . -.++..++++++|+
T Consensus 2 kIafIG-LG~MG~pmA~~L~~aG-------~~v~v~~r~~~ka~~~~~~~Ga------~-------~a~s~~eaa~~aDv 60 (286)
T COG2084 2 KIAFIG-LGIMGSPMAANLLKAG-------HEVTVYNRTPEKAAELLAAAGA------T-------VAASPAEAAAEADV 60 (286)
T ss_pred eEEEEc-CchhhHHHHHHHHHCC-------CEEEEEeCChhhhhHHHHHcCC------c-------ccCCHHHHHHhCCE
Confidence 566777 5999999999999999 8999999999996555544321 1 11334677888999
Q ss_pred EeecCCCCCCCCHHHHHHHHH----------hCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEE
Q 012947 92 LLNCVGPYRLHGDPVAAACVH----------SGCDYLDISGEPEFMERMEARYHEKAVETGSLLV 146 (452)
Q Consensus 92 VIn~aGp~~~~~~~vv~ac~~----------~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv 146 (452)
||.|+.. ...++.... .|..+||.|.-.+-.-+ +..+.+++.|...+
T Consensus 61 Vitmv~~-----~~~V~~V~~g~~g~~~~~~~G~i~IDmSTisp~~a~---~~a~~~~~~G~~~l 117 (286)
T COG2084 61 VITMLPD-----DAAVRAVLFGENGLLEGLKPGAIVIDMSTISPETAR---ELAAALAAKGLEFL 117 (286)
T ss_pred EEEecCC-----HHHHHHHHhCccchhhcCCCCCEEEECCCCCHHHHH---HHHHHHHhcCCcEE
Confidence 9999842 233333332 36668888765443322 23455566666555
No 429
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=96.21 E-value=0.0075 Score=57.81 Aligned_cols=68 Identities=13% Similarity=0.160 Sum_probs=48.2
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc----
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS---- 87 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~---- 87 (452)
+.+=-.+||++|+++|++|+++| ++|++.+|.. .+ . .. ....+|+.+.++++++++
T Consensus 17 R~itN~SSGgIG~AIA~~la~~G-------a~Vvlv~~~~-~l-------~---~~--~~~~~Dv~d~~s~~~l~~~v~~ 76 (227)
T TIGR02114 17 RSITNHSTGHLGKIITETFLSAG-------HEVTLVTTKR-AL-------K---PE--PHPNLSIREIETTKDLLITLKE 76 (227)
T ss_pred eeecCCcccHHHHHHHHHHHHCC-------CEEEEEcChh-hc-------c---cc--cCCcceeecHHHHHHHHHHHHH
Confidence 34444568999999999999999 8999887631 11 0 00 113478888877776643
Q ss_pred ---CccEEeecCCCC
Q 012947 88 ---QTKLLLNCVGPY 99 (452)
Q Consensus 88 ---~~dvVIn~aGp~ 99 (452)
+.|++|||||..
T Consensus 77 ~~g~iDiLVnnAgv~ 91 (227)
T TIGR02114 77 LVQEHDILIHSMAVS 91 (227)
T ss_pred HcCCCCEEEECCEec
Confidence 579999999964
No 430
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=96.19 E-value=0.11 Score=52.57 Aligned_cols=131 Identities=9% Similarity=0.037 Sum_probs=75.9
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC--C-CCCCccEEEEeCCCHHHHHH
Q 012947 8 PELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--S-HSLSIPILTADTTDPPSLHR 84 (452)
Q Consensus 8 ~~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~--~-~~~~v~~v~~Dl~d~~sl~~ 84 (452)
-+..+|.|+|| |.+|..++..++..+- .++.+.++++++++...-++.. . ......+ .. ..| . +
T Consensus 4 ~~~~KI~IIGa-G~vG~~ia~~la~~gl------~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I-~~-~~d---~-~ 70 (321)
T PTZ00082 4 IKRRKISLIGS-GNIGGVMAYLIVLKNL------GDVVLFDIVKNIPQGKALDISHSNVIAGSNSKV-IG-TNN---Y-E 70 (321)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCC------CeEEEEeCCCchhhHHHHHHHhhhhccCCCeEE-EE-CCC---H-H
Confidence 34468999996 9999999999888772 3799999998865432222210 0 0111222 21 133 2 3
Q ss_pred HHcCccEEeecCCCCCCCCH-----HHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHH
Q 012947 85 LCSQTKLLLNCVGPYRLHGD-----PVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELG 159 (452)
Q Consensus 85 ~~~~~dvVIn~aGp~~~~~~-----~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~ 159 (452)
.++++|+||+++|.....+. .-.+...+ .....+++.....+.+. .+..|+ . +-|.|+.
T Consensus 71 ~l~~aDiVI~tag~~~~~~~~~~~~~r~~~l~~----------n~~i~~~i~~~i~~~~p-~a~~iv-~----sNP~di~ 134 (321)
T PTZ00082 71 DIAGSDVVIVTAGLTKRPGKSDKEWNRDDLLPL----------NAKIMDEVAEGIKKYCP-NAFVIV-I----TNPLDVM 134 (321)
T ss_pred HhCCCCEEEECCCCCCCCCCCcCCCCHHHHHHH----------HHHHHHHHHHHHHHHCC-CeEEEE-e----cCcHHHH
Confidence 57899999999987544433 22222111 12334444444444442 223333 2 3688999
Q ss_pred HHHHhhhc
Q 012947 160 VMFNSRQW 167 (452)
Q Consensus 160 ~~~~~~~~ 167 (452)
++.+.+..
T Consensus 135 t~~~~~~s 142 (321)
T PTZ00082 135 VKLLQEHS 142 (321)
T ss_pred HHHHHHhc
Confidence 98887665
No 431
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas
Probab=96.17 E-value=0.043 Score=54.73 Aligned_cols=125 Identities=13% Similarity=0.061 Sum_probs=74.3
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCCCCCCce-EEEEEecChhHHHHHHHHhCC---CCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 13 VIILGASGFTGKYVVREALKLFNFPSSPIK-SLALAGRNPTRVKQALQWASP---SHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 13 ilV~GATG~iG~~va~~L~~~g~~~~~~~~-~v~iagR~~~kl~~l~~~l~~---~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
|.|+|| |.+|..++..|+..+ + ++.+.++++++++....++.. ...... .+.. -.| . +.+++
T Consensus 1 I~IIGa-G~vG~~ia~~la~~~-------l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~-~I~~-t~d---~-~~l~d 66 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLALKE-------LGDVVLLDIVEGLPQGKALDISQAAPILGSDT-KVTG-TND---Y-EDIAG 66 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhCC-------CcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCe-EEEE-cCC---H-HHhCC
Confidence 568999 999999999998877 4 899999998766433322211 001111 2222 123 2 34789
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhc
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQW 167 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~ 167 (452)
+|+||.++|.....+..-.+...+ .....+.......+.+ ..++.|+. +-|.|+.++.+.+..
T Consensus 67 ADiVIit~g~p~~~~~~r~e~~~~----------n~~i~~~i~~~i~~~~-p~~~iIv~-----sNP~di~t~~~~~~s 129 (300)
T cd01339 67 SDVVVITAGIPRKPGMSRDDLLGT----------NAKIVKEVAENIKKYA-PNAIVIVV-----TNPLDVMTYVAYKAS 129 (300)
T ss_pred CCEEEEecCCCCCcCCCHHHHHHH----------HHHHHHHHHHHHHHHC-CCeEEEEe-----cCcHHHHHHHHHHHh
Confidence 999999998655444322222222 2344555555554433 23444443 368899999888765
No 432
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=96.16 E-value=0.093 Score=52.43 Aligned_cols=127 Identities=16% Similarity=0.131 Sum_probs=77.1
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC--CCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--SHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 13 ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~--~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
|.|+|+ |++|..++-.|+..+-. .++.+.++++++++....++.. .......+.. ..| .+.++++|
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~~~~-----~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~--~~~----~~~l~~aD 68 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAKGLA-----SELVLVDVNEEKAKGDALDLSHASAFLATGTIVR--GGD----YADAADAD 68 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhcCCC-----CEEEEEeCCccHHHHHHHhHHHhccccCCCeEEE--CCC----HHHhCCCC
Confidence 468897 88999999999887621 4799999999998888777742 0111122221 123 34789999
Q ss_pred EEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhc
Q 012947 91 LLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQW 167 (452)
Q Consensus 91 vVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~ 167 (452)
+||.++|.....++.=.+.... ....++++.....+.+ .++..|+- +-|.|+.++.+.+.-
T Consensus 69 iVIitag~p~~~~~~R~~l~~~----------n~~i~~~~~~~i~~~~-p~~~viv~-----sNP~d~~~~~~~~~s 129 (300)
T cd00300 69 IVVITAGAPRKPGETRLDLINR----------NAPILRSVITNLKKYG-PDAIILVV-----SNPVDILTYVAQKLS 129 (300)
T ss_pred EEEEcCCCCCCCCCCHHHHHHH----------HHHHHHHHHHHHHHhC-CCeEEEEc-----cChHHHHHHHHHHHh
Confidence 9999999644333111111111 2334444444444333 23444432 368899999887763
No 433
>PRK06270 homoserine dehydrogenase; Provisional
Probab=96.12 E-value=0.42 Score=48.68 Aligned_cols=169 Identities=9% Similarity=0.046 Sum_probs=89.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCC---CCCCceE-EEEEecC----------hhHHHHHHHHhCCCCCCCccEEEEe
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNF---PSSPIKS-LALAGRN----------PTRVKQALQWASPSHSLSIPILTAD 75 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~---~~~~~~~-v~iagR~----------~~kl~~l~~~l~~~~~~~v~~v~~D 75 (452)
.++|.|+|. |.+|+.+++.|.++... ......+ +.+++|+ .+++....++.+ .+.... +
T Consensus 2 ~i~V~IiG~-G~VG~~~~~~L~~~~~~~~~~~g~~~~vvai~d~~~~~~~~~Gi~~~~~~~~~~~~~-----~~~~~~-~ 74 (341)
T PRK06270 2 EMKIALIGF-GGVGQGVAELLAEKREYLKKRYGLDLKVVAIADSSGSAIDPDGLDLELALKVKEETG-----KLADYP-E 74 (341)
T ss_pred eEEEEEECC-CHHHHHHHHHHHHhHHHHHHHcCCCEEEEEEEeCCCcccCcCCCCHHHHHHHHhccC-----CcccCc-c
Confidence 368999996 99999999998765200 0000145 4456653 233333332211 111110 0
Q ss_pred CCCHHHHHHHHc--CccEEeecCCCCCCC---CHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCC-
Q 012947 76 TTDPPSLHRLCS--QTKLLLNCVGPYRLH---GDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSAC- 149 (452)
Q Consensus 76 l~d~~sl~~~~~--~~dvVIn~aGp~~~~---~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~- 149 (452)
.....++++++. ++|+||.|.++.... ....+..|+++|.|.|-.+ ..+..... ..+.+.|+++|+.+...+
T Consensus 75 ~~~~~d~~ell~~~~~DvVvd~T~s~~~~~~~a~~~~~~aL~~GkhVVtaN-K~pla~~~-~eL~~~A~~~g~~~~~ea~ 152 (341)
T PRK06270 75 GGGEISGLEVIRSVDADVVVEATPTNIETGEPALSHCRKALERGKHVVTSN-KGPLALAY-KELKELAKKNGVRFRYEAT 152 (341)
T ss_pred ccccCCHHHHhhccCCCEEEECCcCcccccchHHHHHHHHHHCCCEEEcCC-cHHHHhhH-HHHHHHHHHcCCEEEEeee
Confidence 001123445553 689999999764432 2567899999999987543 22222222 456778888998765322
Q ss_pred CCCcchhhHHHHHHhhhcCCCCCcceEEEEEEeccCCccccccccHHHHHHhH
Q 012947 150 GFDSIPAELGVMFNSRQWIPPAVPNQIEAYVSLESDKRIVGNFGTYESAVLGV 202 (452)
Q Consensus 150 G~~s~P~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~GT~~S~~~~~ 202 (452)
-..++| .+...+++........++..++ ||..=++..|
T Consensus 153 v~~glP----ii~~l~~~l~g~~I~~I~GIln-----------GT~nyIl~~m 190 (341)
T PRK06270 153 VGGAMP----IINLAKETLAGNDIKSIKGILN-----------GTTNYILTRM 190 (341)
T ss_pred eeechh----HHHHHHhhcccCceEEEEEEEe-----------CcHHHHHHHH
Confidence 112455 3444444432233444444433 6766455555
No 434
>COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only]
Probab=96.09 E-value=0.13 Score=51.79 Aligned_cols=117 Identities=22% Similarity=0.246 Sum_probs=78.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
+.++|.|+|++++.++..+..+.+.+.. ..-+.+++|+.++++++.++++ +. -.. .+++++++.
T Consensus 2 ~~irvgiiG~G~~~~~~~~~~~~~~~~~----~~~vav~d~~~~~a~~~a~~~~------~~---~~~---~~~~~ll~~ 65 (342)
T COG0673 2 KMIRVGIIGAGGIAGKAHLPALAALGGG----LELVAVVDRDPERAEAFAEEFG------IA---KAY---TDLEELLAD 65 (342)
T ss_pred CeeEEEEEcccHHHHHHhHHHHHhCCCc----eEEEEEecCCHHHHHHHHHHcC------CC---ccc---CCHHHHhcC
Confidence 4589999999888888888888876510 1357888999999999998874 12 122 346677764
Q ss_pred --ccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHH--HHHHHHHHHHHHhCccEEE
Q 012947 89 --TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFM--ERMEARYHEKAVETGSLLV 146 (452)
Q Consensus 89 --~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~--~~~~~~~~~~A~~~gv~iv 146 (452)
+|+|+-+.-+ ..+ ..++.+|+++|.|.+= |-++. -+-.+.+-+.|+++|+.+.
T Consensus 66 ~~iD~V~Iatp~-~~H-~e~~~~AL~aGkhVl~---EKPla~t~~ea~~l~~~a~~~~~~l~ 122 (342)
T COG0673 66 PDIDAVYIATPN-ALH-AELALAALEAGKHVLC---EKPLALTLEEAEELVELARKAGVKLM 122 (342)
T ss_pred CCCCEEEEcCCC-hhh-HHHHHHHHhcCCEEEE---cCCCCCCHHHHHHHHHHHHHcCCcee
Confidence 7899888744 334 5788999999998431 22211 1112345567788877654
No 435
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=96.07 E-value=0.02 Score=59.24 Aligned_cols=74 Identities=12% Similarity=0.103 Sum_probs=55.3
Q ss_pred CCCeEEEEcC----------------CchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEE
Q 012947 9 ELFDVIILGA----------------SGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPIL 72 (452)
Q Consensus 9 ~~~~ilV~GA----------------TG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v 72 (452)
+..+++|+|| ||.+|..++++|..+| ++|.+..++.... . +. .+.
T Consensus 184 ~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~G-------a~V~~~~g~~~~~------~----~~--~~~ 244 (390)
T TIGR00521 184 EGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRG-------ADVTLITGPVSLL------T----PP--GVK 244 (390)
T ss_pred CCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCC-------CEEEEeCCCCccC------C----CC--CcE
Confidence 3467999998 3569999999999999 8988877655321 1 11 335
Q ss_pred EEeCCCHHHH-HHHH----cCccEEeecCCCCCC
Q 012947 73 TADTTDPPSL-HRLC----SQTKLLLNCVGPYRL 101 (452)
Q Consensus 73 ~~Dl~d~~sl-~~~~----~~~dvVIn~aGp~~~ 101 (452)
..|+++.+++ ++++ .+.|++|||||+...
T Consensus 245 ~~~v~~~~~~~~~~~~~~~~~~D~~i~~Aavsd~ 278 (390)
T TIGR00521 245 SIKVSTAEEMLEAALNELAKDFDIFISAAAVADF 278 (390)
T ss_pred EEEeccHHHHHHHHHHhhcccCCEEEEccccccc
Confidence 6899998888 5454 368999999998654
No 436
>PRK14852 hypothetical protein; Provisional
Probab=96.03 E-value=0.038 Score=62.81 Aligned_cols=105 Identities=13% Similarity=0.112 Sum_probs=69.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-------------------hhHHHHHHHHhCC-CCCCC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASP-SHSLS 68 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-------------------~~kl~~l~~~l~~-~~~~~ 68 (452)
+..+|+|.|+ |++|..+++.|+..|- -++.+++-+ ..|.+.+.+.+.. ....+
T Consensus 331 ~~srVlVvGl-GGlGs~ia~~LAraGV------G~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~ 403 (989)
T PRK14852 331 LRSRVAIAGL-GGVGGIHLMTLARTGI------GNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLD 403 (989)
T ss_pred hcCcEEEECC-cHHHHHHHHHHHHcCC------CeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCe
Confidence 3567999997 7789999999999984 355555432 1243333333321 11234
Q ss_pred ccEEEEeCCCHHHHHHHHcCccEEeecCCCCCC-CCHHHHHHHHHhCCcEEEec
Q 012947 69 IPILTADTTDPPSLHRLCSQTKLLLNCVGPYRL-HGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 69 v~~v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~-~~~~vv~ac~~~g~~yvDls 121 (452)
+.++...+ +++.++++++++|+||+|.--+.. ....+.+.|.+.++.+|...
T Consensus 404 I~~~~~~I-~~en~~~fl~~~DiVVDa~D~~~~~~rr~l~~~c~~~~IP~I~ag 456 (989)
T PRK14852 404 IRSFPEGV-AAETIDAFLKDVDLLVDGIDFFALDIRRRLFNRALELGIPVITAG 456 (989)
T ss_pred EEEEecCC-CHHHHHHHhhCCCEEEECCCCccHHHHHHHHHHHHHcCCCEEEee
Confidence 44444455 557899999999999999854322 12467889999999888654
No 437
>TIGR02130 dapB_plant dihydrodipicolinate reductase. This narrow family includes genes from Arabidopsis and Fibrobacter succinogenes (which probably recieved the gene from a plant via lateral gene transfer). The sequences are distantly related to the dihydrodipicolinate reductases from archaea. In Fibrobacter this gene is the only candidate DHPR in the genome.
Probab=96.02 E-value=0.059 Score=52.95 Aligned_cols=107 Identities=12% Similarity=0.145 Sum_probs=63.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEE--ecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALA--GRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~ia--gR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
++|+|.||+|-+|+.+++.+.+.+ ++++.+ ++.. ..+.+.+ +. ...++++. .-+...++..+++.
T Consensus 1 ~~V~V~Ga~GkMG~~v~~av~~~~-------~~Lv~~~~~~~~-~~~~~~~-~~---g~~v~v~~-~~~~~~~l~~~~~~ 67 (275)
T TIGR02130 1 IQIMVNGCPGKMGKAVAEAADAAG-------LEIVPTSFGGEE-EAENEAE-VA---GKEILLHG-PSEREARIGEVFAK 67 (275)
T ss_pred CeEEEeCCCChHHHHHHHHHhcCC-------CEEEeeEccccc-cccchhh-hc---ccceeeec-cccccccHHHHHhh
Confidence 479999999999999999987743 666653 2211 1111111 11 11233321 11223556676666
Q ss_pred -cc-EEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHH
Q 012947 89 -TK-LLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARY 134 (452)
Q Consensus 89 -~d-vVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~ 134 (452)
+| |+|...-|-.. ...++.|.++++++|--| ..|..+-+..+
T Consensus 68 ~~d~VvIDFT~P~~~--~~n~~~~~~~gv~~ViGT--TG~~~~~~~~l 111 (275)
T TIGR02130 68 YPELICIDYTHPSAV--NDNAAFYGKHGIPFVMGT--TGGDREALAKL 111 (275)
T ss_pred cCCEEEEECCChHHH--HHHHHHHHHCCCCEEEcC--CCCCHHHHHHH
Confidence 88 99998766443 457899999999876433 33444433444
No 438
>PRK08291 ectoine utilization protein EutC; Validated
Probab=96.00 E-value=0.021 Score=57.85 Aligned_cols=97 Identities=14% Similarity=0.283 Sum_probs=65.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+++|+|+ |..|+..+..+....+ ..++.+.+|+.++++++.+++.. ...+.+... +++++++.++
T Consensus 132 ~~~v~IiGa-G~~a~~~~~al~~~~~-----~~~V~v~~R~~~~a~~l~~~~~~--~~g~~v~~~-----~d~~~al~~a 198 (330)
T PRK08291 132 ASRAAVIGA-GEQARLQLEALTLVRP-----IREVRVWARDAAKAEAYAADLRA--ELGIPVTVA-----RDVHEAVAGA 198 (330)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCC-----CCEEEEEcCCHHHHHHHHHHHhh--ccCceEEEe-----CCHHHHHccC
Confidence 357999998 7779999998886431 15899999999999999887742 112332222 2367778899
Q ss_pred cEEeecCCCCCCCCHHHHHH-HHHhCCcEEEecCc
Q 012947 90 KLLLNCVGPYRLHGDPVAAA-CVHSGCDYLDISGE 123 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~a-c~~~g~~yvDlsge 123 (452)
|+||++... .+++++. .++.|+|...+...
T Consensus 199 DiVi~aT~s----~~p~i~~~~l~~g~~v~~vg~d 229 (330)
T PRK08291 199 DIIVTTTPS----EEPILKAEWLHPGLHVTAMGSD 229 (330)
T ss_pred CEEEEeeCC----CCcEecHHHcCCCceEEeeCCC
Confidence 999998743 2355544 35666665554433
No 439
>cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively. This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole.
Probab=95.97 E-value=0.05 Score=54.09 Aligned_cols=23 Identities=35% Similarity=0.397 Sum_probs=20.4
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCC
Q 012947 12 DVIILGASGFTGKYVVREALKLFN 35 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~ 35 (452)
+|+|+|+ |.+|..++++|+..|.
T Consensus 1 kVLIvGa-GGLGs~vA~~La~aGV 23 (307)
T cd01486 1 KCLLLGA-GTLGCNVARNLLGWGV 23 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCC
Confidence 5899998 7789999999999884
No 440
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=95.96 E-value=0.11 Score=56.57 Aligned_cols=130 Identities=12% Similarity=0.045 Sum_probs=83.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-HcCc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~-~~~~ 89 (452)
-+++|.|. |-+|+.+++.|.+++ .++.+.++|+++.+++.+ .+...+.+|.+|++.++++ ++++
T Consensus 418 ~hiiI~G~-G~~G~~la~~L~~~g-------~~vvvId~d~~~~~~~~~-------~g~~~i~GD~~~~~~L~~a~i~~a 482 (558)
T PRK10669 418 NHALLVGY-GRVGSLLGEKLLAAG-------IPLVVIETSRTRVDELRE-------RGIRAVLGNAANEEIMQLAHLDCA 482 (558)
T ss_pred CCEEEECC-ChHHHHHHHHHHHCC-------CCEEEEECCHHHHHHHHH-------CCCeEEEcCCCCHHHHHhcCcccc
Confidence 45888887 788999999999988 789999999999877754 2578999999999999865 5789
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHhC-CcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhcC
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHSG-CDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQWI 168 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~g-~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~~ 168 (452)
|.|+-+.+- ......++..+.+.. ..++=...+.+ + ..+.-++.|+..+- .|....+..+.+.+.
T Consensus 483 ~~viv~~~~-~~~~~~iv~~~~~~~~~~~iiar~~~~--~-----~~~~l~~~Gad~vv------~p~~~~a~~i~~~l~ 548 (558)
T PRK10669 483 RWLLLTIPN-GYEAGEIVASAREKRPDIEIIARAHYD--D-----EVAYITERGANQVV------MGEREIARTMLELLE 548 (558)
T ss_pred CEEEEEcCC-hHHHHHHHHHHHHHCCCCeEEEEECCH--H-----HHHHHHHcCCCEEE------ChHHHHHHHHHHHhc
Confidence 988766531 111123444444432 22222222211 1 11122345554332 466777777777775
Q ss_pred C
Q 012947 169 P 169 (452)
Q Consensus 169 ~ 169 (452)
.
T Consensus 549 ~ 549 (558)
T PRK10669 549 T 549 (558)
T ss_pred C
Confidence 4
No 441
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=95.94 E-value=0.042 Score=55.01 Aligned_cols=128 Identities=16% Similarity=0.101 Sum_probs=79.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC-CCCCCc-cEEEEeCCCHHHHHHHHcC
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP-SHSLSI-PILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~-~~~~~v-~~v~~Dl~d~~sl~~~~~~ 88 (452)
++|.|+|| |.+|+.++-.|+.++. ..++.+.++++++++-...++.. ...... ..+.+| .| -+.+++
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~-----~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~----y~~~~~ 69 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGL-----GSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GD----YEDLKG 69 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccc-----cceEEEEEcccccccchhcchhhcchhccCceEEecC-CC----hhhhcC
Confidence 47999999 9999999999977663 13899999998877766666632 000111 122222 22 556889
Q ss_pred ccEEeecCCCCCCCCH---HHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhh
Q 012947 89 TKLLLNCVGPYRLHGD---PVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSR 165 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~---~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~ 165 (452)
+|+||-+||.-...|+ -+++.-. ..++.+.....+.+. .++.+|- +-|-|+.+|.+.+
T Consensus 70 aDiVvitAG~prKpGmtR~DLl~~Na-------------~I~~~i~~~i~~~~~-d~ivlVv-----tNPvD~~ty~~~k 130 (313)
T COG0039 70 ADIVVITAGVPRKPGMTRLDLLEKNA-------------KIVKDIAKAIAKYAP-DAIVLVV-----TNPVDILTYIAMK 130 (313)
T ss_pred CCEEEEeCCCCCCCCCCHHHHHHhhH-------------HHHHHHHHHHHhhCC-CeEEEEe-----cCcHHHHHHHHHH
Confidence 9999999997776662 2222221 223333333333332 3444442 4688999999988
Q ss_pred hcC
Q 012947 166 QWI 168 (452)
Q Consensus 166 ~~~ 168 (452)
...
T Consensus 131 ~sg 133 (313)
T COG0039 131 FSG 133 (313)
T ss_pred hcC
Confidence 885
No 442
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=95.94 E-value=0.043 Score=54.74 Aligned_cols=113 Identities=15% Similarity=0.042 Sum_probs=69.1
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCccE
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~dv 91 (452)
+|.|+|. |-+|+.+++.|++.+ ++|.+.+|++++.+++.+ .+ +. . ..+.+++.+-++++|+
T Consensus 2 ~Ig~IGl-G~mG~~mA~~L~~~g-------~~v~v~dr~~~~~~~~~~-~g------~~--~--~~s~~~~~~~~~~adv 62 (299)
T PRK12490 2 KLGLIGL-GKMGGNMAERLREDG-------HEVVGYDVNQEAVDVAGK-LG------IT--A--RHSLEELVSKLEAPRT 62 (299)
T ss_pred EEEEEcc-cHHHHHHHHHHHhCC-------CEEEEEECCHHHHHHHHH-CC------Ce--e--cCCHHHHHHhCCCCCE
Confidence 6888885 999999999999988 789999999998877643 21 11 1 2233333333334689
Q ss_pred EeecCCCCCCCCHHHHHHHH---HhCCcEEEecCc-HHHHHHHHHHHHHHHHhCccEEEcC
Q 012947 92 LLNCVGPYRLHGDPVAAACV---HSGCDYLDISGE-PEFMERMEARYHEKAVETGSLLVSA 148 (452)
Q Consensus 92 VIn~aGp~~~~~~~vv~ac~---~~g~~yvDlsge-~~~~~~~~~~~~~~A~~~gv~iv~~ 148 (452)
||.|+.+... -..+++... ..+..+||++.. +...+++ .+..++.|+..+-+
T Consensus 63 Vi~~vp~~~~-~~~v~~~i~~~l~~g~ivid~st~~~~~~~~~----~~~~~~~g~~~vda 118 (299)
T PRK12490 63 IWVMVPAGEV-TESVIKDLYPLLSPGDIVVDGGNSRYKDDLRR----AEELAERGIHYVDC 118 (299)
T ss_pred EEEEecCchH-HHHHHHHHhccCCCCCEEEECCCCCchhHHHH----HHHHHHcCCeEEeC
Confidence 9888743211 123333322 245568998654 4444444 33444567766643
No 443
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=95.89 E-value=0.02 Score=57.99 Aligned_cols=100 Identities=15% Similarity=0.215 Sum_probs=67.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+++|+|+ |..++..++.|+...+ .-++.+.+|+.++.+++.+++.. ...+.+.. . +++++++.++
T Consensus 129 ~~~v~iiGa-G~qA~~~~~al~~~~~-----i~~v~V~~R~~~~a~~~a~~~~~--~~g~~v~~--~---~~~~~av~~a 195 (326)
T TIGR02992 129 SSVVAIFGA-GMQARLQLEALTLVRD-----IRSARIWARDSAKAEALALQLSS--LLGIDVTA--A---TDPRAAMSGA 195 (326)
T ss_pred CcEEEEECC-CHHHHHHHHHHHHhCC-----ccEEEEECCCHHHHHHHHHHHHh--hcCceEEE--e---CCHHHHhccC
Confidence 357999997 8899999999975331 14799999999999999887742 11233322 2 3467778899
Q ss_pred cEEeecCCCCCCCCHHHHH-HHHHhCCcEEEecCcHHH
Q 012947 90 KLLLNCVGPYRLHGDPVAA-ACVHSGCDYLDISGEPEF 126 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~-ac~~~g~~yvDlsge~~~ 126 (452)
|+||+|.... ++++. ..++.|+|...+....+.
T Consensus 196 DiVvtaT~s~----~p~i~~~~l~~g~~i~~vg~~~p~ 229 (326)
T TIGR02992 196 DIIVTTTPSE----TPILHAEWLEPGQHVTAMGSDAEH 229 (326)
T ss_pred CEEEEecCCC----CcEecHHHcCCCcEEEeeCCCCCC
Confidence 9999997432 34443 355667766655443333
No 444
>PRK04148 hypothetical protein; Provisional
Probab=95.87 E-value=0.069 Score=46.85 Aligned_cols=97 Identities=16% Similarity=0.159 Sum_probs=72.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
+..+++++|. | .|..+++.|.+.| ++|..++.+++..+...+. .+.++..|+.++. -+.-++
T Consensus 16 ~~~kileIG~-G-fG~~vA~~L~~~G-------~~ViaIDi~~~aV~~a~~~-------~~~~v~dDlf~p~--~~~y~~ 77 (134)
T PRK04148 16 KNKKIVELGI-G-FYFKVAKKLKESG-------FDVIVIDINEKAVEKAKKL-------GLNAFVDDLFNPN--LEIYKN 77 (134)
T ss_pred cCCEEEEEEe-c-CCHHHHHHHHHCC-------CEEEEEECCHHHHHHHHHh-------CCeEEECcCCCCC--HHHHhc
Confidence 3468999997 4 7899999999988 8999999999987766542 4689999998765 355678
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhCCc--EEEecCcH
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSGCD--YLDISGEP 124 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g~~--yvDlsge~ 124 (452)
+|+|..+--|-... .++++.+.+-+++ ..-++||.
T Consensus 78 a~liysirpp~el~-~~~~~la~~~~~~~~i~~l~~e~ 114 (134)
T PRK04148 78 AKLIYSIRPPRDLQ-PFILELAKKINVPLIIKPLSGEE 114 (134)
T ss_pred CCEEEEeCCCHHHH-HHHHHHHHHcCCCEEEEcCCCCC
Confidence 99998876544333 5777888777776 33455654
No 445
>PLN02350 phosphogluconate dehydrogenase (decarboxylating)
Probab=95.84 E-value=0.23 Score=53.02 Aligned_cols=119 Identities=18% Similarity=0.186 Sum_probs=67.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
.+|-++| .|-.|+.+++.|+++| ++|.+.+|+.++.+++.+.... .....+.. ..+++++.+.++++|
T Consensus 7 ~~IG~IG-LG~MG~~mA~nL~~~G-------~~V~V~NRt~~k~~~l~~~~~~--~Ga~~~~~--a~s~~e~v~~l~~~d 74 (493)
T PLN02350 7 SRIGLAG-LAVMGQNLALNIAEKG-------FPISVYNRTTSKVDETVERAKK--EGNLPLYG--FKDPEDFVLSIQKPR 74 (493)
T ss_pred CCEEEEe-eHHHHHHHHHHHHhCC-------CeEEEECCCHHHHHHHHHhhhh--cCCccccc--CCCHHHHHhcCCCCC
Confidence 4688888 4999999999999998 8999999999999888763210 00001111 224444444444577
Q ss_pred EEeecCCCCCCCCHHHHHH---HHHhCCcEEEecCc-HHHHHHHHHHHHHHHHhCccEEE
Q 012947 91 LLLNCVGPYRLHGDPVAAA---CVHSGCDYLDISGE-PEFMERMEARYHEKAVETGSLLV 146 (452)
Q Consensus 91 vVIn~aGp~~~~~~~vv~a---c~~~g~~yvDlsge-~~~~~~~~~~~~~~A~~~gv~iv 146 (452)
+||.|+.-.. .-+.+++- ..+.|.-+||.+.. +.-.+++ .+..+++|+..+
T Consensus 75 vIi~~v~~~~-aV~~Vi~gl~~~l~~G~iiID~sT~~~~~t~~~----~~~l~~~Gi~fl 129 (493)
T PLN02350 75 SVIILVKAGA-PVDQTIKALSEYMEPGDCIIDGGNEWYENTERR----IKEAAEKGLLYL 129 (493)
T ss_pred EEEEECCCcH-HHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHH----HHHHHHcCCeEE
Confidence 7777762111 11222211 12235557777654 2333333 333444555544
No 446
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=95.84 E-value=0.06 Score=54.43 Aligned_cols=72 Identities=15% Similarity=0.162 Sum_probs=54.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
.-+|+|+|+. ++|...++++...+ .+|++.+|+++|++. ..++++ +.+ .|.+|++.++++-+.+
T Consensus 167 G~~V~I~G~G-GlGh~avQ~Aka~g-------a~Via~~~~~~K~e~-a~~lGA------d~~-i~~~~~~~~~~~~~~~ 230 (339)
T COG1064 167 GKWVAVVGAG-GLGHMAVQYAKAMG-------AEVIAITRSEEKLEL-AKKLGA------DHV-INSSDSDALEAVKEIA 230 (339)
T ss_pred CCEEEEECCc-HHHHHHHHHHHHcC-------CeEEEEeCChHHHHH-HHHhCC------cEE-EEcCCchhhHHhHhhC
Confidence 3579999996 89999999998888 899999999999854 455542 222 2333666666666669
Q ss_pred cEEeecCC
Q 012947 90 KLLLNCVG 97 (452)
Q Consensus 90 dvVIn~aG 97 (452)
|++|++++
T Consensus 231 d~ii~tv~ 238 (339)
T COG1064 231 DAIIDTVG 238 (339)
T ss_pred cEEEECCC
Confidence 99999997
No 447
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=95.82 E-value=0.058 Score=50.70 Aligned_cols=79 Identities=15% Similarity=0.144 Sum_probs=48.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC---hhHHH---------------HHHHHhCC-CCCCCcc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN---PTRVK---------------QALQWASP-SHSLSIP 70 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~---~~kl~---------------~l~~~l~~-~~~~~v~ 70 (452)
..+|+|.|+ |.+|..++++|++.|. -+|.+.+++ .+.+. .+.+.+.. ....++.
T Consensus 21 ~~~V~IvG~-GglGs~ia~~La~~Gv------g~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~ 93 (200)
T TIGR02354 21 QATVAICGL-GGLGSNVAINLARAGI------GKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIE 93 (200)
T ss_pred CCcEEEECc-CHHHHHHHHHHHHcCC------CEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEE
Confidence 467999999 7799999999999983 368888877 32221 11222211 0112333
Q ss_pred EEEEeCCCHHHHHHHHcCccEEeecC
Q 012947 71 ILTADTTDPPSLHRLCSQTKLLLNCV 96 (452)
Q Consensus 71 ~v~~Dl~d~~sl~~~~~~~dvVIn~a 96 (452)
.+..+++ .+.+.++++++|+||.|.
T Consensus 94 ~~~~~i~-~~~~~~~~~~~DlVi~a~ 118 (200)
T TIGR02354 94 AYDEKIT-EENIDKFFKDADIVCEAF 118 (200)
T ss_pred EeeeeCC-HhHHHHHhcCCCEEEECC
Confidence 3344453 355666777777777764
No 448
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=95.78 E-value=0.037 Score=60.89 Aligned_cols=73 Identities=21% Similarity=0.299 Sum_probs=61.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-HcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~-~~~ 88 (452)
+.+++|.|. |-+|+.+++.|.+++ .++++.+.|+++.+.+.+ .+.+++.+|.+|++.++++ +++
T Consensus 400 ~~~vII~G~-Gr~G~~va~~L~~~g-------~~vvvID~d~~~v~~~~~-------~g~~v~~GDat~~~~L~~agi~~ 464 (621)
T PRK03562 400 QPRVIIAGF-GRFGQIVGRLLLSSG-------VKMTVLDHDPDHIETLRK-------FGMKVFYGDATRMDLLESAGAAK 464 (621)
T ss_pred cCcEEEEec-ChHHHHHHHHHHhCC-------CCEEEEECCHHHHHHHHh-------cCCeEEEEeCCCHHHHHhcCCCc
Confidence 356889887 788999999999988 789999999999887754 2468999999999998864 678
Q ss_pred ccEEeecCC
Q 012947 89 TKLLLNCVG 97 (452)
Q Consensus 89 ~dvVIn~aG 97 (452)
+|+||-+..
T Consensus 465 A~~vvv~~~ 473 (621)
T PRK03562 465 AEVLINAID 473 (621)
T ss_pred CCEEEEEeC
Confidence 999998873
No 449
>PRK06141 ornithine cyclodeaminase; Validated
Probab=95.76 E-value=0.04 Score=55.43 Aligned_cols=102 Identities=15% Similarity=0.225 Sum_probs=67.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..+++|+|+ |..|+.+++.+....+ ..+|.+.+|++++.+++.+++.. ..+.+..+ ++++++++++
T Consensus 125 ~~~v~iiG~-G~~a~~~~~al~~~~~-----~~~V~V~~Rs~~~a~~~a~~~~~---~g~~~~~~-----~~~~~av~~a 190 (314)
T PRK06141 125 ASRLLVVGT-GRLASLLALAHASVRP-----IKQVRVWGRDPAKAEALAAELRA---QGFDAEVV-----TDLEAAVRQA 190 (314)
T ss_pred CceEEEECC-cHHHHHHHHHHHhcCC-----CCEEEEEcCCHHHHHHHHHHHHh---cCCceEEe-----CCHHHHHhcC
Confidence 467999995 9999999997776331 16899999999999999888742 12222222 3456778899
Q ss_pred cEEeecCCCCCCCCHHHHH-HHHHhCCcEEEecCc-HHHHHHH
Q 012947 90 KLLLNCVGPYRLHGDPVAA-ACVHSGCDYLDISGE-PEFMERM 130 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~-ac~~~g~~yvDlsge-~~~~~~~ 130 (452)
|+||++.... +++++ ..++.|+ +||..|. .+..+++
T Consensus 191 DIVi~aT~s~----~pvl~~~~l~~g~-~i~~ig~~~~~~~El 228 (314)
T PRK06141 191 DIISCATLST----EPLVRGEWLKPGT-HLDLVGNFTPDMREC 228 (314)
T ss_pred CEEEEeeCCC----CCEecHHHcCCCC-EEEeeCCCCcccccC
Confidence 9998876422 34442 3456677 4555443 4444444
No 450
>COG0743 Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Lipid metabolism]
Probab=95.75 E-value=0.34 Score=49.07 Aligned_cols=124 Identities=18% Similarity=0.222 Sum_probs=77.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEE--EEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHH-------
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLA--LAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPS------- 81 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~--iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~s------- 81 (452)
.+++|+|+||-||....+-+.+++. .+++. .++||.+++.+..++++. +. ++..|-.+...
T Consensus 2 k~i~iLGSTGSIG~qtLdVi~~~p~-----~f~vval~ag~n~~~l~~q~~~f~P----~~-v~~~d~~~~~~l~~~~~~ 71 (385)
T COG0743 2 KKLTILGSTGSIGTQTLDVIRRNPD-----KFEVVALAAGKNVELLAEQIREFKP----KY-VVIADESAAKELEDLLPG 71 (385)
T ss_pred ceEEEEecCCchhHHHHHHHHhCCC-----cEEEEEEecCCcHHHHHHHHHHhCC----ce-EEecChHHHHHHHhhccC
Confidence 4799999999999999999888763 15554 367899998888888752 11 22233333333
Q ss_pred ---------HHHHHc--CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcC
Q 012947 82 ---------LHRLCS--QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSA 148 (452)
Q Consensus 82 ---------l~~~~~--~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~ 148 (452)
+.+++. ++|+|+|..- ...|.+-.-++++.|.+..=.+=|...+.- ..+.+.++++|+.|++-
T Consensus 72 ~~v~~G~~~l~e~a~~~~~d~Vm~Aiv--G~aGL~pTlaAi~aGK~iaLANKEsLV~aG--~l~~~~~k~~g~~llPV 145 (385)
T COG0743 72 TEVLVGEEGLCELAAEDDADVVMNAIV--GAAGLLPTLAAIKAGKTIALANKESLVTAG--ELVMDAAKESGAQLLPV 145 (385)
T ss_pred ceEEecHHHHHHHHhcCCCCEEeehhh--hhcccHHHHHHHHcCCceeecchhhhhccc--HHHHHHHHHcCCEEecc
Confidence 333333 4688888642 123444445666777665444434333322 23456788899998754
No 451
>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=95.75 E-value=0.028 Score=57.61 Aligned_cols=98 Identities=13% Similarity=0.146 Sum_probs=60.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
++|-|.||||++|+.+.+.|+.+..- +..++.....+.+ .... -.+ .+-.....++.|++. ++++|
T Consensus 2 ~~VAIVGATG~vG~ell~llL~~~~f---~~~~l~~~ss~~s-g~~~-~~f-----~g~~~~v~~~~~~~~----~~~~D 67 (369)
T PRK06598 2 KKVGFVGWRGMVGSVLMQRMVEENDF---DLIEPVFFSTSQA-GGAA-PSF-----GGKEGTLQDAFDIDA----LKKLD 67 (369)
T ss_pred eEEEEEeCCCHHHHHHHHHHHhCCCC---CcCcEEEecchhh-CCcc-ccc-----CCCcceEEecCChhH----hcCCC
Confidence 57899999999999999977776531 0012555443211 1111 111 111234445555444 36799
Q ss_pred EEeecCCCCCCCCHHHHHHHHHhCCc--EEEecCcH
Q 012947 91 LLLNCVGPYRLHGDPVAAACVHSGCD--YLDISGEP 124 (452)
Q Consensus 91 vVIn~aGp~~~~~~~vv~ac~~~g~~--yvDlsge~ 124 (452)
+|+.++|.- ....++..+.+.|+. .||.++..
T Consensus 68 ivf~a~~~~--~s~~~~~~~~~aG~~~~VID~Ss~f 101 (369)
T PRK06598 68 IIITCQGGD--YTNEVYPKLRAAGWQGYWIDAASTL 101 (369)
T ss_pred EEEECCCHH--HHHHHHHHHHhCCCCeEEEECChHH
Confidence 999998643 346777778888954 99999754
No 452
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.
Probab=95.74 E-value=0.055 Score=54.38 Aligned_cols=82 Identities=16% Similarity=0.062 Sum_probs=52.8
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCccE
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~dv 91 (452)
+|.|+||+|.+|..++-.|+..+- .-++++.++++ .+....++.. ......+.... +.+++.+.++++|+
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~-----~~elvL~Di~~--a~g~a~DL~~-~~~~~~i~~~~--~~~~~~~~~~daDi 70 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPY-----VSELSLYDIAG--AAGVAADLSH-IPTAASVKGFS--GEEGLENALKGADV 70 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCC-----CcEEEEecCCC--CcEEEchhhc-CCcCceEEEec--CCCchHHHcCCCCE
Confidence 589999999999999999988762 14799999977 2222223321 01112222111 11235678999999
Q ss_pred EeecCCCCCCCC
Q 012947 92 LLNCVGPYRLHG 103 (452)
Q Consensus 92 VIn~aGp~~~~~ 103 (452)
||.++|.....+
T Consensus 71 vvitaG~~~~~g 82 (312)
T TIGR01772 71 VVIPAGVPRKPG 82 (312)
T ss_pred EEEeCCCCCCCC
Confidence 999999755444
No 453
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=95.71 E-value=0.065 Score=53.89 Aligned_cols=74 Identities=16% Similarity=0.063 Sum_probs=51.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCH----HHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDP----PSLHRL 85 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~----~sl~~~ 85 (452)
.-.++|+||+|.+|..+++.+...| .++++..++.++.+.+.+.++. .. ..|..+. +.+.+.
T Consensus 152 g~~VlI~Ga~G~vG~~aiqlAk~~G-------~~Vi~~~~~~~~~~~~~~~lGa------~~-vi~~~~~~~~~~~i~~~ 217 (338)
T cd08295 152 GETVFVSAASGAVGQLVGQLAKLKG-------CYVVGSAGSDEKVDLLKNKLGF------DD-AFNYKEEPDLDAALKRY 217 (338)
T ss_pred CCEEEEecCccHHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHHHHhcCC------ce-eEEcCCcccHHHHHHHh
Confidence 3579999999999999999888777 7888889999988766654642 11 2233222 222222
Q ss_pred H-cCccEEeecCC
Q 012947 86 C-SQTKLLLNCVG 97 (452)
Q Consensus 86 ~-~~~dvVIn~aG 97 (452)
. .++|+|++++|
T Consensus 218 ~~~gvd~v~d~~g 230 (338)
T cd08295 218 FPNGIDIYFDNVG 230 (338)
T ss_pred CCCCcEEEEECCC
Confidence 2 25799999887
No 454
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=95.70 E-value=0.027 Score=50.60 Aligned_cols=75 Identities=13% Similarity=0.182 Sum_probs=51.2
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC-CCCCccEEE-EeCCCHHHHHHHHcCc
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILT-ADTTDPPSLHRLCSQT 89 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~-~~~~v~~v~-~Dl~d~~sl~~~~~~~ 89 (452)
+|.|+|| |-.|.+++..|+.++ .+|.+.+|+++.++.+.+.-... ..+.+.+-. ..+ ..+++++++++
T Consensus 1 KI~ViGa-G~~G~AlA~~la~~g-------~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~--t~dl~~a~~~a 70 (157)
T PF01210_consen 1 KIAVIGA-GNWGTALAALLADNG-------HEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKA--TTDLEEALEDA 70 (157)
T ss_dssp EEEEESS-SHHHHHHHHHHHHCT-------EEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEE--ESSHHHHHTT-
T ss_pred CEEEECc-CHHHHHHHHHHHHcC-------CEEEEEeccHHHHHHHHHhCCCCCCCCCcccCccccc--ccCHHHHhCcc
Confidence 5899998 778999999999998 89999999999888777643210 011111110 011 13467888999
Q ss_pred cEEeecC
Q 012947 90 KLLLNCV 96 (452)
Q Consensus 90 dvVIn~a 96 (452)
|+||-++
T Consensus 71 d~Iiiav 77 (157)
T PF01210_consen 71 DIIIIAV 77 (157)
T ss_dssp SEEEE-S
T ss_pred cEEEecc
Confidence 9999887
No 455
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=95.70 E-value=0.035 Score=50.70 Aligned_cols=55 Identities=18% Similarity=0.270 Sum_probs=43.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
+..+|+|+|+++.+|..++++|.+++ .++.++.|+. +++.+.+.+
T Consensus 43 ~gk~vlViG~G~~~G~~~a~~L~~~g-------~~V~v~~r~~----------------------------~~l~~~l~~ 87 (168)
T cd01080 43 AGKKVVVVGRSNIVGKPLAALLLNRN-------ATVTVCHSKT----------------------------KNLKEHTKQ 87 (168)
T ss_pred CCCEEEEECCcHHHHHHHHHHHhhCC-------CEEEEEECCc----------------------------hhHHHHHhh
Confidence 45789999997778999999999988 6888888863 234566777
Q ss_pred ccEEeecCCC
Q 012947 89 TKLLLNCVGP 98 (452)
Q Consensus 89 ~dvVIn~aGp 98 (452)
+|+||++.|-
T Consensus 88 aDiVIsat~~ 97 (168)
T cd01080 88 ADIVIVAVGK 97 (168)
T ss_pred CCEEEEcCCC
Confidence 8888888763
No 456
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=95.69 E-value=0.076 Score=52.97 Aligned_cols=97 Identities=15% Similarity=0.182 Sum_probs=65.2
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEE-EEEecChhHH-HHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSL-ALAGRNPTRV-KQALQWASPSHSLSIPILTADTTDPPSLHRL- 85 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v-~iagR~~~kl-~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~- 85 (452)
+++++-|+| +|.+|+..+..+.+... .++ ++++++.++. .+..++++ +... .++.+.+-+.
T Consensus 3 ~klrVAIIG-tG~IGt~hm~~l~~~~~------velvAVvdid~es~gla~A~~~G------i~~~---~~~ie~LL~~~ 66 (302)
T PRK08300 3 SKLKVAIIG-SGNIGTDLMIKILRSEH------LEPGAMVGIDPESDGLARARRLG------VATS---AEGIDGLLAMP 66 (302)
T ss_pred CCCeEEEEc-CcHHHHHHHHHHhcCCC------cEEEEEEeCChhhHHHHHHHHcC------CCcc---cCCHHHHHhCc
Confidence 468999999 89999998888876431 454 5788887642 23344432 2211 1333434332
Q ss_pred -HcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCc
Q 012947 86 -CSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGE 123 (452)
Q Consensus 86 -~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge 123 (452)
+.++|+|+.+.+.... ......+.++|+|.||.+.-
T Consensus 67 ~~~dIDiVf~AT~a~~H--~e~a~~a~eaGk~VID~sPA 103 (302)
T PRK08300 67 EFDDIDIVFDATSAGAH--VRHAAKLREAGIRAIDLTPA 103 (302)
T ss_pred CCCCCCEEEECCCHHHH--HHHHHHHHHcCCeEEECCcc
Confidence 2578999999976533 57788899999999999864
No 457
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=95.68 E-value=0.082 Score=52.39 Aligned_cols=93 Identities=17% Similarity=0.193 Sum_probs=58.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCC-HHHHHHHHcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTD-PPSLHRLCSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d-~~sl~~~~~~ 88 (452)
.-+++|+||+|.+|+.+++.+...| .+++++.|+.++.+.+ ++++ ... ..|..+ .+.+.+. .+
T Consensus 163 ~~~vlI~ga~g~vG~~~~~~a~~~g-------~~v~~~~~~~~~~~~~-~~~~------~~~-~~~~~~~~~~~~~~-~~ 226 (332)
T cd08259 163 GDTVLVTGAGGGVGIHAIQLAKALG-------ARVIAVTRSPEKLKIL-KELG------ADY-VIDGSKFSEDVKKL-GG 226 (332)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcC-------CeEEEEeCCHHHHHHH-HHcC------CcE-EEecHHHHHHHHhc-cC
Confidence 3479999999999999999999888 7888889988877655 4332 111 123222 1223332 26
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhCCcEEEec
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDls 121 (452)
.|+|++|+|... ...+-.|...+-++|.+.
T Consensus 227 ~d~v~~~~g~~~---~~~~~~~~~~~g~~v~~g 256 (332)
T cd08259 227 ADVVIELVGSPT---IEESLRSLNKGGRLVLIG 256 (332)
T ss_pred CCEEEECCChHH---HHHHHHHhhcCCEEEEEc
Confidence 899999997432 222233334444566554
No 458
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=95.67 E-value=0.017 Score=56.43 Aligned_cols=82 Identities=18% Similarity=0.169 Sum_probs=61.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHH--HHH-HHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRV--KQA-LQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl--~~l-~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
...+|+|-||.-|.++++.|+..| +.|.-+.|..+.. ... +-++......++.++.+|++|..+|.++++
T Consensus 3 K~ALITGITGQDGsYLa~lLLekG-------Y~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~ 75 (345)
T COG1089 3 KVALITGITGQDGSYLAELLLEKG-------YEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILE 75 (345)
T ss_pred ceEEEecccCCchHHHHHHHHhcC-------cEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHH
Confidence 468999999999999999999998 8888877753321 110 111111123457899999999999999998
Q ss_pred --CccEEeecCCCC
Q 012947 88 --QTKLLLNCVGPY 99 (452)
Q Consensus 88 --~~dvVIn~aGp~ 99 (452)
+.|-|.|.++..
T Consensus 76 ~v~PdEIYNLaAQS 89 (345)
T COG1089 76 EVQPDEIYNLAAQS 89 (345)
T ss_pred hcCchhheeccccc
Confidence 579999998753
No 459
>PTZ00142 6-phosphogluconate dehydrogenase; Provisional
Probab=95.64 E-value=0.075 Score=56.44 Aligned_cols=118 Identities=13% Similarity=0.071 Sum_probs=67.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
.+|-|+|. |-.|..+++.|+++| ++|.+.+|++++.+++.+... .....+.. ..+.+++.+.++++|
T Consensus 2 ~~IgvIGL-G~MG~~lA~nL~~~G-------~~V~v~dr~~~~~~~l~~~~~---~~g~~i~~--~~s~~e~v~~l~~~d 68 (470)
T PTZ00142 2 SDIGLIGL-AVMGQNLALNIASRG-------FKISVYNRTYEKTEEFVKKAK---EGNTRVKG--YHTLEELVNSLKKPR 68 (470)
T ss_pred CEEEEEeE-hHHHHHHHHHHHHCC-------CeEEEEeCCHHHHHHHHHhhh---hcCCccee--cCCHHHHHhcCCCCC
Confidence 36889996 899999999999998 899999999999988876421 01111111 223333333333577
Q ss_pred EEeecCCCCCCCCHHHHHHHH---HhCCcEEEecCcH-HHHHHHHHHHHHHHHhCccEEE
Q 012947 91 LLLNCVGPYRLHGDPVAAACV---HSGCDYLDISGEP-EFMERMEARYHEKAVETGSLLV 146 (452)
Q Consensus 91 vVIn~aGp~~~~~~~vv~ac~---~~g~~yvDlsge~-~~~~~~~~~~~~~A~~~gv~iv 146 (452)
+||-++-+.... +.+++... ..|...||.+... .-..+. .+..+++|+..+
T Consensus 69 ~Iil~v~~~~~v-~~vi~~l~~~L~~g~iIID~gn~~~~dt~~r----~~~l~~~Gi~fl 123 (470)
T PTZ00142 69 KVILLIKAGEAV-DETIDNLLPLLEKGDIIIDGGNEWYLNTERR----IKRCEEKGILYL 123 (470)
T ss_pred EEEEEeCChHHH-HHHHHHHHhhCCCCCEEEECCCCCHHHHHHH----HHHHHHcCCeEE
Confidence 777766432211 22332222 2345567765432 222222 234445566554
No 460
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=95.62 E-value=0.046 Score=59.91 Aligned_cols=89 Identities=15% Similarity=0.139 Sum_probs=68.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH-HcC
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL-CSQ 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~-~~~ 88 (452)
+.+++|.|. |-+|+.+++.|.+++ .++.+.++|+++.+++.+ ....++.+|.+|++.++++ +++
T Consensus 400 ~~~vII~G~-Gr~G~~va~~L~~~g-------~~vvvID~d~~~v~~~~~-------~g~~v~~GDat~~~~L~~agi~~ 464 (601)
T PRK03659 400 KPQVIIVGF-GRFGQVIGRLLMANK-------MRITVLERDISAVNLMRK-------YGYKVYYGDATQLELLRAAGAEK 464 (601)
T ss_pred cCCEEEecC-chHHHHHHHHHHhCC-------CCEEEEECCHHHHHHHHh-------CCCeEEEeeCCCHHHHHhcCCcc
Confidence 356888886 888999999999988 789999999999887654 2468999999999999876 778
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhC
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSG 114 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g 114 (452)
+|+||-+.+- ......++..+.+..
T Consensus 465 A~~vv~~~~d-~~~n~~i~~~~r~~~ 489 (601)
T PRK03659 465 AEAIVITCNE-PEDTMKIVELCQQHF 489 (601)
T ss_pred CCEEEEEeCC-HHHHHHHHHHHHHHC
Confidence 9999988742 112234445555543
No 461
>PRK06349 homoserine dehydrogenase; Provisional
Probab=95.60 E-value=0.35 Score=50.81 Aligned_cols=119 Identities=18% Similarity=0.157 Sum_probs=74.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCC---CCCCceE-EEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNF---PSSPIKS-LALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL 85 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~---~~~~~~~-v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~ 85 (452)
+++|.|+|. |.+|+.+++.|.++.+. ......+ +.+++|+.++.+. .. .....+ .+ +++++
T Consensus 3 ~i~VgiiG~-G~VG~~~~~~L~~~~~~l~~~~g~~i~l~~V~~~~~~~~~~----~~---~~~~~~----~~---d~~~l 67 (426)
T PRK06349 3 PLKVGLLGL-GTVGSGVVRILEENAEEIAARAGRPIEIKKVAVRDLEKDRG----VD---LPGILL----TT---DPEEL 67 (426)
T ss_pred eEEEEEEee-CHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEeCChhhccC----CC---Ccccce----eC---CHHHH
Confidence 578999995 99999999988665310 0000144 4567888766431 11 011111 12 35556
Q ss_pred Hc--CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEE
Q 012947 86 CS--QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLV 146 (452)
Q Consensus 86 ~~--~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv 146 (452)
++ ++|+||.|.|+... ....+..|+++|.|.|-.+ ......-...+.+.|+++|+.+.
T Consensus 68 l~d~~iDvVve~tg~~~~-~~~~~~~aL~~GkhVVtaN--K~~~a~~~~eL~~lA~~~gv~l~ 127 (426)
T PRK06349 68 VNDPDIDIVVELMGGIEP-ARELILKALEAGKHVVTAN--KALLAVHGAELFAAAEEKGVDLY 127 (426)
T ss_pred hhCCCCCEEEECCCCchH-HHHHHHHHHHCCCeEEEcC--HHHHHHHHHHHHHHHHHcCCcEE
Confidence 64 57999999876533 3678899999999987443 23333344667788999998765
No 462
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=95.60 E-value=0.11 Score=45.19 Aligned_cols=45 Identities=20% Similarity=0.215 Sum_probs=36.9
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEE--EecChhHHHHHHHHhC
Q 012947 13 VIILGASGFTGKYVVREALKLFNFPSSPIKSLAL--AGRNPTRVKQALQWAS 62 (452)
Q Consensus 13 ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~i--agR~~~kl~~l~~~l~ 62 (452)
|.|+|+||-||+...+-+.++.+ .++|.. +++|.+++.+...++.
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d-----~f~v~~Lsa~~n~~~L~~q~~~f~ 47 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPD-----KFEVVALSAGSNIEKLAEQAREFK 47 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTT-----TEEEEEEEESSTHHHHHHHHHHHT
T ss_pred CEEEcCCcHHHHHHHHHHHhCCC-----ceEEEEEEcCCCHHHHHHHHHHhC
Confidence 68999999999999999988763 266643 5788999998888874
No 463
>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase. This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).
Probab=95.59 E-value=0.065 Score=53.10 Aligned_cols=106 Identities=17% Similarity=0.102 Sum_probs=68.3
Q ss_pred CCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCccEEeecCC
Q 012947 18 ASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKLLLNCVG 97 (452)
Q Consensus 18 ATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~dvVIn~aG 97 (452)
|.|.+|..+++.|++.+ ++|.+.+|+.++.+.+.+. .+. .. .+..++++++|+||.|+.
T Consensus 3 GlG~mG~~mA~~L~~~G-------~~V~v~dr~~~~~~~l~~~-------g~~--~~-----~s~~~~~~~advVil~vp 61 (288)
T TIGR01692 3 GLGNMGGPMAANLLKAG-------HPVRVFDLFPDAVEEAVAA-------GAQ--AA-----ASPAEAAEGADRVITMLP 61 (288)
T ss_pred cccHhHHHHHHHHHhCC-------CeEEEEeCCHHHHHHHHHc-------CCe--ec-----CCHHHHHhcCCEEEEeCC
Confidence 46999999999999988 7899999999998776541 111 11 235667889999999986
Q ss_pred CCCCCCHHHH------HHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcC
Q 012947 98 PYRLHGDPVA------AACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSA 148 (452)
Q Consensus 98 p~~~~~~~vv------~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~ 148 (452)
+.... ..++ ......+..+||.++..+-.. ....+.+++.|+.++-+
T Consensus 62 ~~~~~-~~v~~g~~~l~~~~~~g~~vid~st~~p~~~---~~~~~~~~~~g~~~vda 114 (288)
T TIGR01692 62 AGQHV-ISVYSGDEGILPKVAKGSLLIDCSTIDPDSA---RKLAELAAAHGAVFMDA 114 (288)
T ss_pred ChHHH-HHHHcCcchHhhcCCCCCEEEECCCCCHHHH---HHHHHHHHHcCCcEEEC
Confidence 43211 2222 112234566889886544322 22345556677776644
No 464
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.59 E-value=0.068 Score=56.18 Aligned_cols=90 Identities=17% Similarity=0.228 Sum_probs=59.1
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc-Cc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-QT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-~~ 89 (452)
.+++|+|+++ +|..+++.|++.| ++|.+.+++........+++. ...+.+...+ ++..+ .. .+
T Consensus 6 k~v~v~G~g~-~G~s~a~~l~~~G-------~~V~~~d~~~~~~~~~~~~l~---~~g~~~~~~~--~~~~~---~~~~~ 69 (447)
T PRK02472 6 KKVLVLGLAK-SGYAAAKLLHKLG-------ANVTVNDGKPFSENPEAQELL---EEGIKVICGS--HPLEL---LDEDF 69 (447)
T ss_pred CEEEEEeeCH-HHHHHHHHHHHCC-------CEEEEEcCCCccchhHHHHHH---hcCCEEEeCC--CCHHH---hcCcC
Confidence 4799999987 9999999999998 899999987543333333332 1233443322 22222 23 48
Q ss_pred cEEeecCCCCCCCCHHHHHHHHHhCCcEE
Q 012947 90 KLLLNCVGPYRLHGDPVAAACVHSGCDYL 118 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~ac~~~g~~yv 118 (452)
|+||++.|... ..++++++.+.|+..+
T Consensus 70 d~vV~s~gi~~--~~~~~~~a~~~~i~v~ 96 (447)
T PRK02472 70 DLMVKNPGIPY--TNPMVEKALEKGIPII 96 (447)
T ss_pred CEEEECCCCCC--CCHHHHHHHHCCCcEE
Confidence 99999988543 2477888887776543
No 465
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=95.53 E-value=0.088 Score=52.42 Aligned_cols=108 Identities=14% Similarity=0.143 Sum_probs=66.3
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCccE
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~dv 91 (452)
+|.|+|. |.+|..+++.|++.+ ++|.+.+|++++.+++.+. + +. ...+..++++++|+
T Consensus 3 ~Ig~IGl-G~mG~~mA~~l~~~G-------~~V~v~d~~~~~~~~~~~~-g------~~-------~~~s~~~~~~~aDv 60 (296)
T PRK15461 3 AIAFIGL-GQMGSPMASNLLKQG-------HQLQVFDVNPQAVDALVDK-G------AT-------PAASPAQAAAGAEF 60 (296)
T ss_pred eEEEEee-CHHHHHHHHHHHHCC-------CeEEEEcCCHHHHHHHHHc-C------Cc-------ccCCHHHHHhcCCE
Confidence 6888985 999999999999998 7999999999998776542 1 11 11234456778888
Q ss_pred EeecCCCCCCCCHHHHH------HHHHhCCcEEEecCcH-HHHHHHHHHHHHHHHhCccEEE
Q 012947 92 LLNCVGPYRLHGDPVAA------ACVHSGCDYLDISGEP-EFMERMEARYHEKAVETGSLLV 146 (452)
Q Consensus 92 VIn~aGp~~~~~~~vv~------ac~~~g~~yvDlsge~-~~~~~~~~~~~~~A~~~gv~iv 146 (452)
||-|+.+.... ..++. .....+.-+||.+.-. ...+++ .+..++.|+.++
T Consensus 61 Vi~~vp~~~~~-~~vl~~~~~i~~~l~~g~lvid~sT~~p~~~~~l----~~~l~~~g~~~l 117 (296)
T PRK15461 61 VITMLPNGDLV-RSVLFGENGVCEGLSRDALVIDMSTIHPLQTDKL----IADMQAKGFSMM 117 (296)
T ss_pred EEEecCCHHHH-HHHHcCcccHhhcCCCCCEEEECCCCCHHHHHHH----HHHHHHcCCcEE
Confidence 88887432110 11211 0122345578876543 333443 333444565554
No 466
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent. The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.
Probab=95.53 E-value=0.089 Score=52.73 Aligned_cols=129 Identities=13% Similarity=0.073 Sum_probs=71.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCC-CCCc-cEEEEeCCCHHHHHHHHcC
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSH-SLSI-PILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~-~~~v-~~v~~Dl~d~~sl~~~~~~ 88 (452)
++|.|+|+ |++|..++..|+..+. .+|++.+++++..+....++..+. .... ..+.. ..| .++ +++
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la~~g~------~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~-t~d---~~~-~~~ 69 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLAEKEL------ADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTG-TNN---YAD-TAN 69 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCC------CeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEe-cCC---HHH-hCC
Confidence 57999997 9999999999999872 379999997765543322221100 0011 12221 123 333 689
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhc
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQW 167 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~ 167 (452)
+|+||-++|.....+..=.+... .....++.+.....+.. ..+.+|+ -+-|.|+.++.+.+.-
T Consensus 70 aDiVIitag~p~~~~~sR~~l~~----------~N~~iv~~i~~~I~~~~-p~~~iIv-----~tNP~di~t~~~~~~s 132 (305)
T TIGR01763 70 SDIVVITAGLPRKPGMSREDLLS----------MNAGIVREVTGRIMEHS-PNPIIVV-----VSNPLDAMTYVAWQKS 132 (305)
T ss_pred CCEEEEcCCCCCCcCCCHHHHHH----------HHHHHHHHHHHHHHHHC-CCeEEEE-----ecCcHHHHHHHHHHHH
Confidence 99999999954332211001000 12233444433333322 2333333 2468899999888773
No 467
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=95.52 E-value=0.055 Score=54.74 Aligned_cols=74 Identities=16% Similarity=0.196 Sum_probs=51.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCH---HHHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDP---PSLHRLC 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~---~sl~~~~ 86 (452)
.-++||+||+|.+|...++.+...| .+++++..+.+|.+ .+.+++. + ...|..++ +.+.++.
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~G-------~~~v~~~~s~~k~~-~~~~lGA------d-~vi~y~~~~~~~~v~~~t 207 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKALG-------ATVVAVVSSSEKLE-LLKELGA------D-HVINYREEDFVEQVRELT 207 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcC-------CcEEEEecCHHHHH-HHHhcCC------C-EEEcCCcccHHHHHHHHc
Confidence 3579999999999999999988887 56666666677776 6666642 1 12233332 3444444
Q ss_pred c--CccEEeecCCC
Q 012947 87 S--QTKLLLNCVGP 98 (452)
Q Consensus 87 ~--~~dvVIn~aGp 98 (452)
. ++|+|++++|.
T Consensus 208 ~g~gvDvv~D~vG~ 221 (326)
T COG0604 208 GGKGVDVVLDTVGG 221 (326)
T ss_pred CCCCceEEEECCCH
Confidence 3 58999999873
No 468
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=95.48 E-value=0.11 Score=52.04 Aligned_cols=93 Identities=11% Similarity=0.072 Sum_probs=59.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCce-EEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCH---HHHHHHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIK-SLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDP---PSLHRLC 86 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~-~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~---~sl~~~~ 86 (452)
-+++|+||+|.+|..+++.+...| . +|+++.+++++.+.+.++++. .. ..|..+. +.+.+..
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G-------~~~Vi~~~~s~~~~~~~~~~lGa------~~-vi~~~~~~~~~~i~~~~ 221 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLG-------CSRVVGICGSDEKCQLLKSELGF------DA-AINYKTDNVAERLRELC 221 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcC-------CCEEEEEcCCHHHHHHHHHhcCC------cE-EEECCCCCHHHHHHHHC
Confidence 579999999999999998877777 6 788889999988777665642 21 2233331 2233322
Q ss_pred -cCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEe
Q 012947 87 -SQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDI 120 (452)
Q Consensus 87 -~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDl 120 (452)
.++|+||+++|... ..-.-.|+..+-++|.+
T Consensus 222 ~~gvd~vid~~g~~~---~~~~~~~l~~~G~iv~~ 253 (345)
T cd08293 222 PEGVDVYFDNVGGEI---SDTVISQMNENSHIILC 253 (345)
T ss_pred CCCceEEEECCCcHH---HHHHHHHhccCCEEEEE
Confidence 25899999987321 11122344455556655
No 469
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=95.44 E-value=0.063 Score=53.72 Aligned_cols=79 Identities=16% Similarity=0.183 Sum_probs=52.1
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCC-CCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPS-HSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~-~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
++|.|+|+ |.+|..++..|++.+ ++|.+.+|++++++++.+..... ....... ...+.-..+.++.++++
T Consensus 2 mkI~iiG~-G~mG~~~a~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 72 (325)
T PRK00094 2 MKIAVLGA-GSWGTALAIVLARNG-------HDVTLWARDPEQAAEINADRENPRYLPGIKL-PDNLRATTDLAEALADA 72 (325)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCC-------CEEEEEECCHHHHHHHHHcCcccccCCCCcC-CCCeEEeCCHHHHHhCC
Confidence 47999997 999999999999988 78999999999887776532100 0000000 00011112345567789
Q ss_pred cEEeecCCC
Q 012947 90 KLLLNCVGP 98 (452)
Q Consensus 90 dvVIn~aGp 98 (452)
|+||-|+.+
T Consensus 73 D~vi~~v~~ 81 (325)
T PRK00094 73 DLILVAVPS 81 (325)
T ss_pred CEEEEeCCH
Confidence 999999854
No 470
>PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional
Probab=95.42 E-value=0.085 Score=53.73 Aligned_cols=102 Identities=14% Similarity=0.090 Sum_probs=65.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEE-EEecChhHHHHHHHHhCCCC----CCCcc-EE--EEeCCCHHHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLA-LAGRNPTRVKQALQWASPSH----SLSIP-IL--TADTTDPPSL 82 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~-iagR~~~kl~~l~~~l~~~~----~~~v~-~v--~~Dl~d~~sl 82 (452)
++|.|.|+ |.+|+.+++.+..+.. .+++ +.+++.+..+.+.+..+.+. +.... +- ...+. ..+
T Consensus 2 ikVaI~G~-GrIGr~va~al~~~~d------~eLvav~d~~~~~~~~la~~~G~~~~~~~~~~~~~~~~~~i~V~--~~~ 72 (341)
T PRK04207 2 IKVGVNGY-GTIGKRVADAVAAQPD------MELVGVAKTKPDYEARVAVEKGYPLYVADPEREKAFEEAGIPVA--GTI 72 (341)
T ss_pred eEEEEECC-CHHHHHHHHHHhcCCC------cEEEEEECCChHHHHHHHHhcCCCccccCccccccccCCceEEc--CCh
Confidence 58999999 9999999999887642 5554 45556555554444332100 00000 00 00111 224
Q ss_pred HHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCc
Q 012947 83 HRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGE 123 (452)
Q Consensus 83 ~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge 123 (452)
++++.++|+||.|.+++. .....+.|+++|+..|+.+++
T Consensus 73 ~el~~~vDVVIdaT~~~~--~~e~a~~~~~aGk~VI~~~~~ 111 (341)
T PRK04207 73 EDLLEKADIVVDATPGGV--GAKNKELYEKAGVKAIFQGGE 111 (341)
T ss_pred hHhhccCCEEEECCCchh--hHHHHHHHHHCCCEEEEcCCC
Confidence 455678999999998764 367889999999999999885
No 471
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=95.39 E-value=0.19 Score=53.87 Aligned_cols=99 Identities=15% Similarity=0.181 Sum_probs=62.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCC----------
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTD---------- 78 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d---------- 78 (452)
.+-+++|+|+ |-+|...++.+...| .+|.+.++++++++.. ++++. .++..|..+
T Consensus 164 pg~kVlViGa-G~iGL~Ai~~Ak~lG-------A~V~a~D~~~~rle~a-eslGA------~~v~i~~~e~~~~~~gya~ 228 (509)
T PRK09424 164 PPAKVLVIGA-GVAGLAAIGAAGSLG-------AIVRAFDTRPEVAEQV-ESMGA------EFLELDFEEEGGSGDGYAK 228 (509)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHH-HHcCC------eEEEeccccccccccchhh
Confidence 4678999998 899999999999888 6899999999998654 44542 333232211
Q ss_pred ----H--HH----HHHHHcCccEEeecCCCCCC-CCHHHHHHHHH---hCCcEEEecC
Q 012947 79 ----P--PS----LHRLCSQTKLLLNCVGPYRL-HGDPVAAACVH---SGCDYLDISG 122 (452)
Q Consensus 79 ----~--~s----l~~~~~~~dvVIn~aGp~~~-~~~~vv~ac~~---~g~~yvDlsg 122 (452)
. +. +.+.++++|+||+|+|.... ....+.+.+++ .|-..||+.-
T Consensus 229 ~~s~~~~~~~~~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~ 286 (509)
T PRK09424 229 VMSEEFIKAEMALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAA 286 (509)
T ss_pred hcchhHHHHHHHHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEcc
Confidence 1 11 12223579999999984321 11122244443 3445666653
No 472
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=95.37 E-value=0.1 Score=51.71 Aligned_cols=117 Identities=15% Similarity=0.144 Sum_probs=75.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ- 88 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~- 88 (452)
+-+|+|.|.||..|+.+.+.|...+ .+ .+++-|+.+-.+. +.-+. --.++.++-+.
T Consensus 6 ~~~~~~~g~~~~~~~~~~~~~~~~g-------~~-~v~~V~p~~~~~~-----------v~G~~----~y~sv~dlp~~~ 62 (286)
T TIGR01019 6 DTKVIVQGITGSQGSFHTEQMLAYG-------TN-IVGGVTPGKGGTT-----------VLGLP----VFDSVKEAVEET 62 (286)
T ss_pred CCcEEEecCCcHHHHHHHHHHHhCC-------CC-EEEEECCCCCcce-----------ecCee----ccCCHHHHhhcc
Confidence 3479999999999999999998877 55 5566666532111 11111 12334555444
Q ss_pred -ccEEeecCCCCCCCCHHHHHHHHHhCCcEE-EecCcHHHHHHHHHHHHHHHHhCccEEE--cCCCCCc
Q 012947 89 -TKLLLNCVGPYRLHGDPVAAACVHSGCDYL-DISGEPEFMERMEARYHEKAVETGSLLV--SACGFDS 153 (452)
Q Consensus 89 -~dvVIn~aGp~~~~~~~vv~ac~~~g~~yv-Dlsge~~~~~~~~~~~~~~A~~~gv~iv--~~~G~~s 153 (452)
+|++|-++.+.. -..+++.|.+.|++.+ =++.-.. +....++.+.|++.|++|+ ||.|+-.
T Consensus 63 ~~Dlavi~vpa~~--v~~~l~e~~~~Gvk~avIis~Gf~--e~~~~~l~~~a~~~girilGPNc~Giin 127 (286)
T TIGR01019 63 GANASVIFVPAPF--AADAIFEAIDAGIELIVCITEGIP--VHDMLKVKRYMEESGTRLIGPNCPGIIT 127 (286)
T ss_pred CCCEEEEecCHHH--HHHHHHHHHHCCCCEEEEECCCCC--HHHHHHHHHHHHHcCCEEECCCCceEEc
Confidence 799999885432 2578899999999743 3332222 2233566788999999999 5667643
No 473
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=95.34 E-value=0.11 Score=52.00 Aligned_cols=74 Identities=16% Similarity=0.054 Sum_probs=50.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHH---H
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRL---C 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~---~ 86 (452)
.-.|+|+||+|.+|..+++.+...| .++++..++.++.+.+ .+++ ... ..|..+.+.+.+. .
T Consensus 139 g~~VLI~ga~g~vG~~aiqlAk~~G-------~~Vi~~~~s~~~~~~~-~~lG------a~~-vi~~~~~~~~~~~~~~~ 203 (325)
T TIGR02825 139 GETVMVNAAAGAVGSVVGQIAKLKG-------CKVVGAAGSDEKVAYL-KKLG------FDV-AFNYKTVKSLEETLKKA 203 (325)
T ss_pred CCEEEEeCCccHHHHHHHHHHHHcC-------CEEEEEeCCHHHHHHH-HHcC------CCE-EEeccccccHHHHHHHh
Confidence 3579999999999999998877777 7888899999887665 4453 121 2233332222222 2
Q ss_pred --cCccEEeecCCC
Q 012947 87 --SQTKLLLNCVGP 98 (452)
Q Consensus 87 --~~~dvVIn~aGp 98 (452)
.++|+|++++|.
T Consensus 204 ~~~gvdvv~d~~G~ 217 (325)
T TIGR02825 204 SPDGYDCYFDNVGG 217 (325)
T ss_pred CCCCeEEEEECCCH
Confidence 257999998873
No 474
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=95.31 E-value=0.067 Score=54.36 Aligned_cols=74 Identities=16% Similarity=0.070 Sum_probs=51.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCH----HHHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDP----PSLHRL 85 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~----~sl~~~ 85 (452)
.-.++|+||+|.+|..+++.+...| .+++++.++.++.+.+.++++. .. ..|..+. +.+.+.
T Consensus 159 g~~VlV~GaaG~vG~~aiqlAk~~G-------~~Vi~~~~~~~k~~~~~~~lGa------~~-vi~~~~~~~~~~~i~~~ 224 (348)
T PLN03154 159 GDSVFVSAASGAVGQLVGQLAKLHG-------CYVVGSAGSSQKVDLLKNKLGF------DE-AFNYKEEPDLDAALKRY 224 (348)
T ss_pred CCEEEEecCccHHHHHHHHHHHHcC-------CEEEEEcCCHHHHHHHHHhcCC------CE-EEECCCcccHHHHHHHH
Confidence 3579999999999999998888777 7888888999988766555641 21 2233322 222222
Q ss_pred H-cCccEEeecCC
Q 012947 86 C-SQTKLLLNCVG 97 (452)
Q Consensus 86 ~-~~~dvVIn~aG 97 (452)
. .++|+|++|+|
T Consensus 225 ~~~gvD~v~d~vG 237 (348)
T PLN03154 225 FPEGIDIYFDNVG 237 (348)
T ss_pred CCCCcEEEEECCC
Confidence 2 25799999887
No 475
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=95.30 E-value=0.13 Score=55.01 Aligned_cols=98 Identities=15% Similarity=0.211 Sum_probs=62.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCC-----------
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTT----------- 77 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~----------- 77 (452)
.+-+++|+|+ |-+|...++.+...| .+|.+.+++.++++... .++ ...+..|..
T Consensus 163 p~akVlViGa-G~iGl~Aa~~ak~lG-------A~V~v~d~~~~rle~a~-~lG------a~~v~v~~~e~g~~~~gYa~ 227 (511)
T TIGR00561 163 PPAKVLVIGA-GVAGLAAIGAANSLG-------AIVRAFDTRPEVKEQVQ-SMG------AEFLELDFKEEGGSGDGYAK 227 (511)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCC-------CEEEEEeCCHHHHHHHH-HcC------CeEEecccccccccccccee
Confidence 3578999997 999999999999988 67999999999876544 353 233333321
Q ss_pred ---CHHH------HHHHHcCccEEeecC---CC-CC-CCCHHHHHHHHHhCCcEEEecC
Q 012947 78 ---DPPS------LHRLCSQTKLLLNCV---GP-YR-LHGDPVAAACVHSGCDYLDISG 122 (452)
Q Consensus 78 ---d~~s------l~~~~~~~dvVIn~a---Gp-~~-~~~~~vv~ac~~~g~~yvDlsg 122 (452)
++.. +.+.++++|+||+|+ |- .. ...+.. -...+.|...||++.
T Consensus 228 ~~s~~~~~~~~~~~~e~~~~~DIVI~TalipG~~aP~Lit~em-v~~MKpGsvIVDlA~ 285 (511)
T TIGR00561 228 VMSEEFIAAEMELFAAQAKEVDIIITTALIPGKPAPKLITEEM-VDSMKAGSVIVDLAA 285 (511)
T ss_pred ecCHHHHHHHHHHHHHHhCCCCEEEECcccCCCCCCeeehHHH-HhhCCCCCEEEEeee
Confidence 1111 455667899999999 41 11 111222 223334556777764
No 476
>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=95.25 E-value=0.078 Score=50.32 Aligned_cols=61 Identities=15% Similarity=0.236 Sum_probs=47.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC--
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ-- 88 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~-- 88 (452)
.+|+|+|++|.+|++|.+-+..++.++ -+|+..+.. .+|+++.++.++++++
T Consensus 2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~----e~wvf~~sk----------------------d~DLt~~a~t~~lF~~ek 55 (315)
T KOG1431|consen 2 KKILVTGGTGLVGSAIVKVVQEQGFDD----ENWVFIGSK----------------------DADLTNLADTRALFESEK 55 (315)
T ss_pred ceEEEecCCchHHHHHHHHHHhcCCCC----cceEEeccc----------------------cccccchHHHHHHHhccC
Confidence 589999999999999999999988522 578877642 2577788888888874
Q ss_pred ccEEeecCC
Q 012947 89 TKLLLNCVG 97 (452)
Q Consensus 89 ~dvVIn~aG 97 (452)
.--|||.|.
T Consensus 56 PthVIhlAA 64 (315)
T KOG1431|consen 56 PTHVIHLAA 64 (315)
T ss_pred CceeeehHh
Confidence 567788763
No 477
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.20 E-value=0.096 Score=52.17 Aligned_cols=74 Identities=18% Similarity=0.200 Sum_probs=61.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
-..+.|.|+.| +|..-+++...-| .+|.+++++..|-+++.+.|++ +.+..-..|++.++++.+-.
T Consensus 182 G~~vgI~GlGG-LGh~aVq~AKAMG-------~rV~vis~~~~kkeea~~~LGA------d~fv~~~~d~d~~~~~~~~~ 247 (360)
T KOG0023|consen 182 GKWVGIVGLGG-LGHMAVQYAKAMG-------MRVTVISTSSKKKEEAIKSLGA------DVFVDSTEDPDIMKAIMKTT 247 (360)
T ss_pred CcEEEEecCcc-cchHHHHHHHHhC-------cEEEEEeCCchhHHHHHHhcCc------ceeEEecCCHHHHHHHHHhh
Confidence 35799999988 9999999988888 8999999999887888887753 44444445889999999988
Q ss_pred cEEeecCC
Q 012947 90 KLLLNCVG 97 (452)
Q Consensus 90 dvVIn~aG 97 (452)
|.++|++.
T Consensus 248 dg~~~~v~ 255 (360)
T KOG0023|consen 248 DGGIDTVS 255 (360)
T ss_pred cCcceeee
Confidence 99988885
No 478
>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p. This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy.
Probab=95.15 E-value=0.12 Score=56.28 Aligned_cols=104 Identities=13% Similarity=0.105 Sum_probs=65.2
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC----------------------hhHHHHHHHHhCC-CC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN----------------------PTRVKQALQWASP-SH 65 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~----------------------~~kl~~l~~~l~~-~~ 65 (452)
+..+|+|+|| |.+|..++++|++.|. -++++++.+ ..|.+.+.+.+.. ..
T Consensus 337 ~~~kVLIvGa-GGLGs~VA~~La~~GV------g~ItlVD~D~Ve~SNL~RQ~Lf~~~Dv~~~Gk~KA~aAa~~Lk~InP 409 (664)
T TIGR01381 337 SQLKVLLLGA-GTLGCNVARCLIGWGV------RHITFVDNGKVSYSNPVRQSLSNFEDCLLGGRGKAETAQKALKRIFP 409 (664)
T ss_pred hcCeEEEECC-cHHHHHHHHHHHHcCC------CeEEEEcCCEECCCccccccccchhhhhhcCCcHHHHHHHHHHHHCC
Confidence 3568999998 7789999999999984 456666542 1133333333321 11
Q ss_pred CCCccEEEEeC-------C---------CHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEe
Q 012947 66 SLSIPILTADT-------T---------DPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDI 120 (452)
Q Consensus 66 ~~~v~~v~~Dl-------~---------d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDl 120 (452)
..++..+...+ + |.+.+.+++++.|+||.|.--+.. ...+-.+|...+...|+.
T Consensus 410 ~v~i~~~~~~Ipm~Gh~i~~~~~~~~~~d~~~l~~Li~~~DvV~d~tDn~es-R~L~n~~c~~~~kplI~a 479 (664)
T TIGR01381 410 SIQATGHRLTVPMPGHPIDEKDVPELEKDIARLEQLIKDHDVVFLLLDSREA-RWLPTVLCSRHKKIAISA 479 (664)
T ss_pred CcEEEEeeeeeccccccCCchhhhhccccHHHHHHHHhhCCEEEECCCCHHH-HHHHHHHHHHhCCCEEEE
Confidence 22333333332 1 225678889999999999853321 134668888888887765
No 479
>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating. This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.
Probab=95.13 E-value=0.19 Score=53.44 Aligned_cols=116 Identities=15% Similarity=0.122 Sum_probs=74.4
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCccE
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTKL 91 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~dv 91 (452)
+|-|+|- |-+|..+++.|++.| ++|.+.+|+.++.+++.++.. ... .+. ...+.+++.+.++++|+
T Consensus 1 ~IG~IGL-G~MG~~mA~nL~~~G-------~~V~v~drt~~~~~~l~~~~~---~g~-~~~--~~~s~~e~v~~l~~~dv 66 (467)
T TIGR00873 1 DIGVIGL-AVMGSNLALNMADHG-------FTVSVYNRTPEKTDEFLAEHA---KGK-KIV--GAYSIEEFVQSLERPRK 66 (467)
T ss_pred CEEEEee-HHHHHHHHHHHHhcC-------CeEEEEeCCHHHHHHHHhhcc---CCC-Cce--ecCCHHHHHhhcCCCCE
Confidence 3667774 899999999999998 899999999999988876421 010 111 23455666666678999
Q ss_pred EeecCCCCCCCCHHHHHHHH---HhCCcEEEecCc-HHHHHHHHHHHHHHHHhCccEEE
Q 012947 92 LLNCVGPYRLHGDPVAAACV---HSGCDYLDISGE-PEFMERMEARYHEKAVETGSLLV 146 (452)
Q Consensus 92 VIn~aGp~~~~~~~vv~ac~---~~g~~yvDlsge-~~~~~~~~~~~~~~A~~~gv~iv 146 (452)
||-|+-+.... +.+++... ..|...||.+.. +.-+.+. .+..++.|+..+
T Consensus 67 Iil~v~~~~~v-~~Vi~~l~~~L~~g~iIID~gns~~~~t~~~----~~~l~~~gi~fv 120 (467)
T TIGR00873 67 IMLMVKAGAPV-DAVINQLLPLLEKGDIIIDGGNSHYPDTERR----YKELKAKGILFV 120 (467)
T ss_pred EEEECCCcHHH-HHHHHHHHhhCCCCCEEEECCCcCHHHHHHH----HHHHHhcCCEEE
Confidence 99988543222 33443332 346668998753 3433333 233455677765
No 480
>PLN02696 1-deoxy-D-xylulose-5-phosphate reductoisomerase
Probab=95.11 E-value=0.41 Score=50.20 Aligned_cols=125 Identities=14% Similarity=0.131 Sum_probs=77.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEE--EEecChhHHHHHHHHhCCCCCCCccEEEEeC-----------
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLA--LAGRNPTRVKQALQWASPSHSLSIPILTADT----------- 76 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~--iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl----------- 76 (452)
+.+|.|+|+||-||+.+.+-+.++.+ .++|. .+++|.+.+.+...++.. +. +...|-
T Consensus 57 ~KkI~ILGSTGSIGtqtLdVI~~~pd-----~f~vvaLaag~Ni~lL~~q~~~f~p----~~-v~v~d~~~~~~l~~~l~ 126 (454)
T PLN02696 57 PKPISLLGSTGSIGTQTLDIVAENPD-----KFKVVALAAGSNVTLLADQVRKFKP----KL-VAVRNESLVDELKEALA 126 (454)
T ss_pred ccEEEEecCCcHhhHHHHHHHHhCcc-----ccEEEEEECCCCHHHHHHHHHHhCC----CE-EEEcCHHHHHHHHHhhc
Confidence 46899999999999999999887642 15553 356788888887777742 11 111121
Q ss_pred ---------CCHHHHHHHHc--CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEE
Q 012947 77 ---------TDPPSLHRLCS--QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLL 145 (452)
Q Consensus 77 ---------~d~~sl~~~~~--~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~i 145 (452)
..++.+.+++. ++|+||+..+-+ .|..-.-+++++|.+..=.+=|...+.- +.....+++.++.|
T Consensus 127 ~~~~~~~vl~G~egl~~la~~~evDiVV~AIvG~--aGL~pTl~AIkaGK~VALANKESLV~aG--~lI~~~ak~~~~~I 202 (454)
T PLN02696 127 DLDDKPEIIPGEEGIVEVARHPEAVTVVTGIVGC--AGLKPTVAAIEAGKDIALANKETLIAGG--PFVLPLAKKHGVKI 202 (454)
T ss_pred CCCCCcEEEECHHHHHHHHcCCCCCEEEEeCccc--cchHHHHHHHHCCCcEEEecHHHHHhhH--HHHHHHHHHcCCeE
Confidence 12356677776 469999986543 2333346677888775544434333222 22345567778887
Q ss_pred EcC
Q 012947 146 VSA 148 (452)
Q Consensus 146 v~~ 148 (452)
++-
T Consensus 203 lPV 205 (454)
T PLN02696 203 LPA 205 (454)
T ss_pred eec
Confidence 754
No 481
>TIGR03736 PRTRC_ThiF PRTRC system ThiF family protein. A novel genetic system characterized by six major proteins, included a ParB homolog and a ThiF homolog, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. This family is the PRTRC system ThiF family protein.
Probab=95.04 E-value=0.17 Score=48.96 Aligned_cols=99 Identities=11% Similarity=0.130 Sum_probs=54.1
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHHcCCC----CCCCceEEEEEecCh------------------hHHHHHHHHhCCCC
Q 012947 8 PELFDVIILGASGFTGKYVVREALKLFNF----PSSPIKSLALAGRNP------------------TRVKQALQWASPSH 65 (452)
Q Consensus 8 ~~~~~ilV~GATG~iG~~va~~L~~~g~~----~~~~~~~v~iagR~~------------------~kl~~l~~~l~~~~ 65 (452)
+++.+|+|+|+ |.+|..+++.|++.|.. +.....++.+++.+. .|.+.+.+.+..-.
T Consensus 9 ~~~~~V~vvG~-GGlGs~v~~~Lar~G~a~~~~G~~~g~~i~lvD~D~Ve~sNLnRQlf~~~dVG~~Ka~v~~~ri~~~~ 87 (244)
T TIGR03736 9 SRPVSVVLVGA-GGTGSQVIAGLARLHHALKALGHPGGLAVTVYDDDTVSEANVGRQAFYPADVGQNKAIVLVNRLNQAM 87 (244)
T ss_pred hCCCeEEEEcC-ChHHHHHHHHHHHccccccccCCCCCCEEEEECCCEEccchhhcccCChhHCCcHHHHHHHHHHHhcc
Confidence 36789999998 77999999999987410 000013777777542 23333444442101
Q ss_pred CCCccEEEEeCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHH
Q 012947 66 SLSIPILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVH 112 (452)
Q Consensus 66 ~~~v~~v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~ 112 (452)
..+++.+...+.. + ..+.++|+||+|+--.. ....+.+.|.+
T Consensus 88 ~~~i~a~~~~~~~-~---~~~~~~DiVi~avDn~~-aR~~l~~~~~~ 129 (244)
T TIGR03736 88 GTDWTAHPERVER-S---STLHRPDIVIGCVDNRA-ARLAILRAFEG 129 (244)
T ss_pred CceEEEEEeeeCc-h---hhhcCCCEEEECCCCHH-HHHHHHHHHHH
Confidence 1233333333433 1 22457888888874221 11345566655
No 482
>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type. This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.
Probab=94.97 E-value=0.084 Score=53.40 Aligned_cols=103 Identities=17% Similarity=0.243 Sum_probs=70.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..++.|+|+ |..|+.-++.|....+ ..+|.+.+|+.++.+++.+++.. ..+.+..+ ++.+++++++
T Consensus 128 ~~~lgiiG~-G~qA~~~l~al~~~~~-----~~~v~V~~r~~~~~~~~~~~~~~---~g~~v~~~-----~~~~eav~~a 193 (325)
T TIGR02371 128 SSVLGIIGA-GRQAWTQLEALSRVFD-----LEEVSVYCRTPSTREKFALRASD---YEVPVRAA-----TDPREAVEGC 193 (325)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCC-----CCEEEEECCCHHHHHHHHHHHHh---hCCcEEEe-----CCHHHHhccC
Confidence 457889975 8999998888876532 26899999999999988887641 12333333 2456778899
Q ss_pred cEEeecCCCCCCCCHHHH-HHHHHhCCcEEEecCcHHHHHHH
Q 012947 90 KLLLNCVGPYRLHGDPVA-AACVHSGCDYLDISGEPEFMERM 130 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv-~ac~~~g~~yvDlsge~~~~~~~ 130 (452)
|+||.|... .+|++ ...++.|+|.+-+....+..+++
T Consensus 194 DiVitaT~s----~~P~~~~~~l~~g~~v~~vGs~~p~~~El 231 (325)
T TIGR02371 194 DILVTTTPS----RKPVVKADWVSEGTHINAIGADAPGKQEL 231 (325)
T ss_pred CEEEEecCC----CCcEecHHHcCCCCEEEecCCCCcccccC
Confidence 999988732 24555 34567888877776555554443
No 483
>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]
Probab=94.95 E-value=0.051 Score=53.18 Aligned_cols=105 Identities=15% Similarity=0.236 Sum_probs=71.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEec---ChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGR---NPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS 87 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR---~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~ 87 (452)
.+++|+|+.||||+..+.+++...|. .+.+..+. ... ++. +++.. ..++-.++..|+.|...+..++.
T Consensus 7 ~~vlItgg~gfi~Sn~~~~~~~~~p~-----~~~v~idkL~~~s~-~~~-l~~~~--n~p~ykfv~~di~~~~~~~~~~~ 77 (331)
T KOG0747|consen 7 KNVLITGGAGFIGSNFINYLVDKYPD-----YKFVNLDKLDYCSN-LKN-LEPVR--NSPNYKFVEGDIADADLVLYLFE 77 (331)
T ss_pred ceEEEecCcCcchhhhhhhcccCCCC-----CcEEEEeecccccc-cch-hhhhc--cCCCceEeeccccchHHHHhhhc
Confidence 67999999999999999999988752 44443332 111 222 22221 34678999999999988888776
Q ss_pred --CccEEeecCCCCCCC----------------CHHHHHHHHHhCC--cEEEecCcH
Q 012947 88 --QTKLLLNCVGPYRLH----------------GDPVAAACVHSGC--DYLDISGEP 124 (452)
Q Consensus 88 --~~dvVIn~aGp~~~~----------------~~~vv~ac~~~g~--~yvDlsge~ 124 (452)
..|.|||.|.-+... ...++++|...|- .+|++|.+-
T Consensus 78 ~~~id~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTde 134 (331)
T KOG0747|consen 78 TEEIDTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDE 134 (331)
T ss_pred cCchhhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccc
Confidence 579999988643321 1457777777743 477776543
No 484
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.93 E-value=0.076 Score=52.63 Aligned_cols=74 Identities=16% Similarity=0.262 Sum_probs=51.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
+..+++|+|++|.+|+.++..|.+.+ .+|.++.|... ++.+.+++
T Consensus 158 ~Gk~vvViG~gg~vGkpia~~L~~~g-------atVtv~~~~t~----------------------------~L~~~~~~ 202 (283)
T PRK14192 158 AGKHAVVVGRSAILGKPMAMMLLNAN-------ATVTICHSRTQ----------------------------NLPELVKQ 202 (283)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHhCC-------CEEEEEeCCch----------------------------hHHHHhcc
Confidence 34589999999999999999999887 68888887322 23344478
Q ss_pred ccEEeecCCCCCCCCHHHHHHHHHhCCcEEEec
Q 012947 89 TKLLLNCVGPYRLHGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 89 ~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDls 121 (452)
+|+|||++|--. ++-...+..+.-.+|+.
T Consensus 203 aDIvI~AtG~~~----~v~~~~lk~gavViDvg 231 (283)
T PRK14192 203 ADIIVGAVGKPE----LIKKDWIKQGAVVVDAG 231 (283)
T ss_pred CCEEEEccCCCC----cCCHHHcCCCCEEEEEE
Confidence 999999997211 22233345555666664
No 485
>cd05296 GH4_P_beta_glucosidase Glycoside Hydrolases Family 4; Phospho-beta-glucosidase. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases such as the phospho-beta-glucosidases. Other organisms (such as archaea and Thermotoga maritima ) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. The 6-phospho-beta-glucosidase from Thermotoga maritima hydrolylzes cellobiose 6-phosphate (6P) into glucose-6P and glucose, in an NAD+ and Mn2+ dependent fashion. The Escherichia coli 6-phospho-beta-glucosidase (also called celF) hydrolyzes a variety of phospho-beta-glucosides including cellobiose-6P, salicin-6P, arbutin-6P, and gentobiose-6P. Phospho-beta-glucosidases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein
Probab=94.83 E-value=0.49 Score=49.57 Aligned_cols=144 Identities=12% Similarity=0.134 Sum_probs=88.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-hhHHHHHH---HHhCCCCCCCccEEEEeCCCHHHHHHHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-PTRVKQAL---QWASPSHSLSIPILTADTTDPPSLHRLC 86 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-~~kl~~l~---~~l~~~~~~~v~~v~~Dl~d~~sl~~~~ 86 (452)
++|+|+||.++-...+++.|++..+. . +.-++++.+.+ +++++.+. +.+-......+.+.. ..+.++++
T Consensus 1 ~KI~iIGaGS~~tp~li~~l~~~~~~-l-~~~ei~L~Did~~~rl~~v~~~~~~~~~~~~~~~~v~~-----t~d~~~al 73 (419)
T cd05296 1 MKLTIIGGGSSYTPELIEGLIRRYEE-L-PVTELVLVDIDEEEKLEIVGALAKRMVKKAGLPIKVHL-----TTDRREAL 73 (419)
T ss_pred CEEEEECCchHhHHHHHHHHHhcccc-C-CCCEEEEecCChHHHHHHHHHHHHHHHHhhCCCeEEEE-----eCCHHHHh
Confidence 58999999998888899999885421 1 22589999999 88875432 222111112333222 13478999
Q ss_pred cCccEEeecCCCCCCCC-HHHHHHHHHhCCcEEEecCcHHHHH---------HHHHHHHHHHHhCccEEEcCCCCCcchh
Q 012947 87 SQTKLLLNCVGPYRLHG-DPVAAACVHSGCDYLDISGEPEFME---------RMEARYHEKAVETGSLLVSACGFDSIPA 156 (452)
Q Consensus 87 ~~~dvVIn~aGp~~~~~-~~vv~ac~~~g~~yvDlsge~~~~~---------~~~~~~~~~A~~~gv~iv~~~G~~s~P~ 156 (452)
+++|.||+++++....+ ....+...+.|+..-|.+|...+.. .+.....+.+ ..+++++- +-|.
T Consensus 74 ~gadfVi~~~~vg~~~~r~~de~i~~~~Gi~gqET~G~GG~~~a~rni~ii~~i~~~i~~~~--Pda~lin~----TNP~ 147 (419)
T cd05296 74 EGADFVFTQIRVGGLEARALDERIPLKHGVIGQETTGAGGFAKALRTIPVILDIAEDVEELA--PDAWLINF----TNPA 147 (419)
T ss_pred CCCCEEEEEEeeCCcchhhhhhhhHHHcCCccccCCCcchHHHhhhhHHHHHHHHHHHHHHC--CCeEEEEe----cCHH
Confidence 99999999987544332 3455666777777667777654433 2222222222 24455543 4688
Q ss_pred hHHHHHHhhhc
Q 012947 157 ELGVMFNSRQW 167 (452)
Q Consensus 157 dl~~~~~~~~~ 167 (452)
|+.++.+.+..
T Consensus 148 ~ivt~a~~k~~ 158 (419)
T cd05296 148 GIVTEAVLRHT 158 (419)
T ss_pred HHHHHHHHHhc
Confidence 88888877665
No 486
>TIGR01771 L-LDH-NAD L-lactate dehydrogenase. This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.
Probab=94.77 E-value=0.27 Score=49.13 Aligned_cols=124 Identities=16% Similarity=0.144 Sum_probs=75.2
Q ss_pred EEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC--C-CCCCccEEEEeCCCHHHHHHHHcCccE
Q 012947 15 ILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP--S-HSLSIPILTADTTDPPSLHRLCSQTKL 91 (452)
Q Consensus 15 V~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~--~-~~~~v~~v~~Dl~d~~sl~~~~~~~dv 91 (452)
|+|+ |.+|..++-.|+..+-. -++.+.+++.++++....++.. . ...++.+. ..| .+.++++|+
T Consensus 1 iIGa-G~VG~~~a~~l~~~~l~-----~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~---~~~----~~~~~daDi 67 (299)
T TIGR01771 1 IIGA-GNVGSSTAFALLNQGIA-----DEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIR---SGD----YSDCKDADL 67 (299)
T ss_pred CCCc-CHHHHHHHHHHHhcCCC-----CEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEe---cCC----HHHHCCCCE
Confidence 4576 99999999999887621 3799999999988887777742 0 11122222 233 457889999
Q ss_pred EeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCCcchhhHHHHHHhhhc
Q 012947 92 LLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFDSIPAELGVMFNSRQW 167 (452)
Q Consensus 92 VIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~s~P~dl~~~~~~~~~ 167 (452)
||-++|.....++.=.+.... ....++.+.....+.+ -+++.|+- +-|.|+.++.+.+..
T Consensus 68 vVitag~~rk~g~~R~dll~~----------N~~i~~~~~~~i~~~~-p~~~vivv-----sNP~d~~t~~~~~~s 127 (299)
T TIGR01771 68 VVITAGAPQKPGETRLELVGR----------NVRIMKSIVPEVVKSG-FDGIFLVA-----TNPVDILTYVAWKLS 127 (299)
T ss_pred EEECCCCCCCCCCCHHHHHHH----------HHHHHHHHHHHHHHhC-CCeEEEEe-----CCHHHHHHHHHHHHh
Confidence 999999755444211111111 1234444444443322 23333332 368899999887775
No 487
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=94.72 E-value=0.3 Score=47.61 Aligned_cols=74 Identities=12% Similarity=0.120 Sum_probs=52.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHH---HHHHH
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPS---LHRLC 86 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~s---l~~~~ 86 (452)
...++|+|++|.+|+.+++.+...| .++.+++++.++.+.+ ++++ +. ...+..+.+. +.+..
T Consensus 140 ~~~vlv~g~~~~ig~~~~~~~~~~g-------~~v~~~~~~~~~~~~~-~~~g------~~-~~~~~~~~~~~~~~~~~~ 204 (323)
T cd05276 140 GETVLIHGGASGVGTAAIQLAKALG-------ARVIATAGSEEKLEAC-RALG------AD-VAINYRTEDFAEEVKEAT 204 (323)
T ss_pred CCEEEEEcCcChHHHHHHHHHHHcC-------CEEEEEcCCHHHHHHH-HHcC------CC-EEEeCCchhHHHHHHHHh
Confidence 3579999999999999999999888 7899999998887665 4442 12 2234443322 33333
Q ss_pred --cCccEEeecCCC
Q 012947 87 --SQTKLLLNCVGP 98 (452)
Q Consensus 87 --~~~dvVIn~aGp 98 (452)
.+.|++|+++|.
T Consensus 205 ~~~~~d~vi~~~g~ 218 (323)
T cd05276 205 GGRGVDVILDMVGG 218 (323)
T ss_pred CCCCeEEEEECCch
Confidence 258999999874
No 488
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=94.72 E-value=0.11 Score=50.22 Aligned_cols=96 Identities=17% Similarity=0.245 Sum_probs=69.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHc--
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCS-- 87 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~-- 87 (452)
.++|+|+|||+= ++.+++.|...+.. ..-..+++|..+-+ ++. ...+.+---+.+.|.+.++
T Consensus 2 ~~~ilvlGGT~D-ar~la~~L~~~~~~----~~~ss~t~~g~~l~----~~~-------~~~~~~G~l~~e~l~~~l~e~ 65 (257)
T COG2099 2 MMRILLLGGTSD-ARALAKKLAAAPVD----IILSSLTGYGAKLA----EQI-------GPVRVGGFLGAEGLAAFLREE 65 (257)
T ss_pred CceEEEEeccHH-HHHHHHHhhccCcc----EEEEEcccccccch----hcc-------CCeeecCcCCHHHHHHHHHHc
Confidence 368999999986 89999999987620 01223344544333 221 2355666678899999987
Q ss_pred CccEEeecCCCCCC-CCHHHHHHHHHhCCcEEEec
Q 012947 88 QTKLLLNCVGPYRL-HGDPVAAACVHSGCDYLDIS 121 (452)
Q Consensus 88 ~~dvVIn~aGp~~~-~~~~vv~ac~~~g~~yvDls 121 (452)
++|+||...-||.. -+++.+++|.+.|+.|+-+.
T Consensus 66 ~i~llIDATHPyAa~iS~Na~~aake~gipy~r~e 100 (257)
T COG2099 66 GIDLLIDATHPYAARISQNAARAAKETGIPYLRLE 100 (257)
T ss_pred CCCEEEECCChHHHHHHHHHHHHHHHhCCcEEEEE
Confidence 68999999988864 35899999999999998764
No 489
>TIGR03693 ocin_ThiF_like putative thiazole-containing bacteriocin maturation protein. Members of this protein family are found in a three-gene operon in Bacillus anthracis and related Bacillus species, where the other two genes are clearly identified with maturation of a putative thiazole-containing bacteriocin precursor. While there is no detectable pairwise sequence similarity between members of this family and the proposed cyclodehydratases such as SagC of Streptococcus pyogenes (see family TIGR03603), both families show similarity through PSI-BLAST to ThiF, a protein involved in biosynthesis of the thiazole moiety for thiamine biosynthesis. This family, therefore, may contribute to cyclodehydratase function in heterocycle-containing bacteriocin biosyntheses. In Bacillus licheniformis ATCC 14580, the bacteriocin precursor gene is adjacent to the gene for this protein.
Probab=94.70 E-value=0.21 Score=53.98 Aligned_cols=101 Identities=11% Similarity=0.090 Sum_probs=71.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHH---HH---HHHhCCCCCCCccEEEEeCCCHHHH
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVK---QA---LQWASPSHSLSIPILTADTTDPPSL 82 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~---~l---~~~l~~~~~~~v~~v~~Dl~d~~sl 82 (452)
|+-+|+|+|. |.+|..++-.|+..|..+ ++.+..++-...+. ++ .+++ ..++.+...|.++.+++
T Consensus 128 R~akVlVlG~-Gg~~s~lv~sL~~sG~~~----I~~vd~D~v~SNlnRIgEl~e~A~~~----n~~v~v~~i~~~~~~dl 198 (637)
T TIGR03693 128 RNAKILAAGS-GDFLTKLVRSLIDSGFPR----FHAIVTDAEEHALDRIHELAEIAEET----DDALLVQEIDFAEDQHL 198 (637)
T ss_pred hcccEEEEec-CchHHHHHHHHHhcCCCc----EEEEeccccchhhhHHHHHHHHHHHh----CCCCceEeccCCcchhH
Confidence 5678999997 667999999999999522 45555455443222 33 3332 34677777777888999
Q ss_pred HHHHcCccEEeecCCCCCCC-CHHHHHHHHHhCCcEE
Q 012947 83 HRLCSQTKLLLNCVGPYRLH-GDPVAAACVHSGCDYL 118 (452)
Q Consensus 83 ~~~~~~~dvVIn~aGp~~~~-~~~vv~ac~~~g~~yv 118 (452)
.+.++..|+||+.+.-+... -..+.++|++.|+.++
T Consensus 199 ~ev~~~~DiVi~vsDdy~~~~Lr~lN~acvkegk~~I 235 (637)
T TIGR03693 199 HEAFEPADWVLYVSDNGDIDDLHALHAFCKEEGKGFI 235 (637)
T ss_pred HHhhcCCcEEEEECCCCChHHHHHHHHHHHHcCCCeE
Confidence 99999999999998644322 2568899999986543
No 490
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=94.68 E-value=0.055 Score=54.17 Aligned_cols=40 Identities=20% Similarity=0.208 Sum_probs=34.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHH
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQAL 58 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~ 58 (452)
++|.|+| .|.+|..++..|+++| ++|.+.+|++++++...
T Consensus 3 ~~V~VIG-~G~mG~~iA~~la~~G-------~~V~v~d~~~~~~~~~~ 42 (308)
T PRK06129 3 GSVAIIG-AGLIGRAWAIVFARAG-------HEVRLWDADPAAAAAAP 42 (308)
T ss_pred cEEEEEC-ccHHHHHHHHHHHHCC-------CeeEEEeCCHHHHHHHH
Confidence 3799999 5999999999999998 79999999998776543
No 491
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=94.67 E-value=0.096 Score=48.08 Aligned_cols=66 Identities=21% Similarity=0.129 Sum_probs=48.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcC
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQ 88 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~ 88 (452)
+..+|.|+|. |-||+.+++.|...| .+|...+|+........+ . .+ . ..++++++++
T Consensus 35 ~g~tvgIiG~-G~IG~~vA~~l~~fG-------~~V~~~d~~~~~~~~~~~-~--------~~-~-----~~~l~ell~~ 91 (178)
T PF02826_consen 35 RGKTVGIIGY-GRIGRAVARRLKAFG-------MRVIGYDRSPKPEEGADE-F--------GV-E-----YVSLDELLAQ 91 (178)
T ss_dssp TTSEEEEEST-SHHHHHHHHHHHHTT--------EEEEEESSCHHHHHHHH-T--------TE-E-----ESSHHHHHHH
T ss_pred CCCEEEEEEE-cCCcCeEeeeeecCC-------ceeEEecccCChhhhccc-c--------cc-e-----eeehhhhcch
Confidence 4678999986 999999999999988 899999999876542221 1 11 1 1357888999
Q ss_pred ccEEeecCC
Q 012947 89 TKLLLNCVG 97 (452)
Q Consensus 89 ~dvVIn~aG 97 (452)
+|+|++++.
T Consensus 92 aDiv~~~~p 100 (178)
T PF02826_consen 92 ADIVSLHLP 100 (178)
T ss_dssp -SEEEE-SS
T ss_pred hhhhhhhhc
Confidence 999999884
No 492
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=94.57 E-value=0.41 Score=46.00 Aligned_cols=104 Identities=13% Similarity=0.149 Sum_probs=66.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecC-------------------hhHHHHHHHHhCCCCCCCcc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRN-------------------PTRVKQALQWASPSHSLSIP 70 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~-------------------~~kl~~l~~~l~~~~~~~v~ 70 (452)
+-.|+|+|. |++|+++++.|++.|- -++.+++-+ ..|.+-+.+.+.. -.+.++
T Consensus 30 ~~~V~VvGi-GGVGSw~veALaRsGi------g~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~-InP~c~ 101 (263)
T COG1179 30 QAHVCVVGI-GGVGSWAVEALARSGI------GRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQ-INPECE 101 (263)
T ss_pred hCcEEEEec-CchhHHHHHHHHHcCC------CeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHh-hCCCce
Confidence 456999998 7799999999999983 356655542 2233333333321 012333
Q ss_pred EEEE-eCCCHHHHHHHHc-CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecC
Q 012947 71 ILTA-DTTDPPSLHRLCS-QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISG 122 (452)
Q Consensus 71 ~v~~-Dl~d~~sl~~~~~-~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsg 122 (452)
+... |.-+++.+++++. +.|.||.|.--. .....++.-|.+++...|-..|
T Consensus 102 V~~~~~f~t~en~~~~~~~~~DyvIDaiD~v-~~Kv~Li~~c~~~ki~vIss~G 154 (263)
T COG1179 102 VTAINDFITEENLEDLLSKGFDYVIDAIDSV-RAKVALIAYCRRNKIPVISSMG 154 (263)
T ss_pred EeehHhhhCHhHHHHHhcCCCCEEEEchhhh-HHHHHHHHHHHHcCCCEEeecc
Confidence 3322 3446788888776 489999987422 2335688889988887765544
No 493
>PRK06823 ornithine cyclodeaminase; Validated
Probab=94.56 E-value=0.12 Score=52.02 Aligned_cols=103 Identities=14% Similarity=0.248 Sum_probs=72.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
..++.|+|+ |..++.-++.+....+ .-+|.+.+|+.++.+++.+.+.. ..+.+..+ ++.+++++++
T Consensus 128 ~~~l~iiG~-G~qA~~~~~a~~~v~~-----i~~v~v~~r~~~~a~~~~~~~~~---~~~~v~~~-----~~~~~av~~A 193 (315)
T PRK06823 128 VSAIGIVGT-GIQARMQLMYLKNVTD-----CRQLWVWGRSETALEEYRQYAQA---LGFAVNTT-----LDAAEVAHAA 193 (315)
T ss_pred CCEEEEECC-cHHHHHHHHHHHhcCC-----CCEEEEECCCHHHHHHHHHHHHh---cCCcEEEE-----CCHHHHhcCC
Confidence 457888886 8999999999887653 26899999999999988877641 23444444 3478889999
Q ss_pred cEEeecCCCCCCCCHHHHH-HHHHhCCcEEEecCcHHHHHHH
Q 012947 90 KLLLNCVGPYRLHGDPVAA-ACVHSGCDYLDISGEPEFMERM 130 (452)
Q Consensus 90 dvVIn~aGp~~~~~~~vv~-ac~~~g~~yvDlsge~~~~~~~ 130 (452)
|+|+.|.+ ..+|+++ ..++.|+|..-+....+..+++
T Consensus 194 DIV~taT~----s~~P~~~~~~l~~G~hi~~iGs~~p~~~El 231 (315)
T PRK06823 194 NLIVTTTP----SREPLLQAEDIQPGTHITAVGADSPGKQEL 231 (315)
T ss_pred CEEEEecC----CCCceeCHHHcCCCcEEEecCCCCcccccC
Confidence 99998764 2245553 3556788866665544444443
No 494
>TIGR00243 Dxr 1-deoxy-D-xylulose 5-phosphate reductoisomerase. 1-deoxy-D-xylulose 5-phosphate is converted to 2-C-methyl-D-erythritol 4-phosphate in the presence of NADPH. It is involved in the synthesis of isopentenyl diphosphate (IPP), a basic building block in isoprenoid, thiamin, and pyridoxal biosynthesis.
Probab=94.54 E-value=0.61 Score=47.94 Aligned_cols=124 Identities=15% Similarity=0.182 Sum_probs=71.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEE--EEecChhHHHHHHHHhCCCCCCCccEEEEeC------------
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLA--LAGRNPTRVKQALQWASPSHSLSIPILTADT------------ 76 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~--iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl------------ 76 (452)
.+|+|+|+||-||+...+-+.++.+ . ++|. .+++|.+++.+...++.. +. ++..|-
T Consensus 2 k~i~IlGsTGSIG~qtL~Vi~~~~~-~----f~v~~Laa~~n~~~L~~q~~~f~p----~~-v~i~d~~~~~~l~~~l~~ 71 (389)
T TIGR00243 2 KQIVILGSTGSIGKSTLDVVRHNPD-H----FQVVALSAGKNVALMVEQILEFRP----KF-VAIDDEASLKDLKTMLQQ 71 (389)
T ss_pred ceEEEEecChHHHHHHHHHHHhCcc-c----cEEEEEEcCCCHHHHHHHHHHcCC----CE-EEEcCHHHHHHHHHHhhc
Confidence 3799999999999999998776542 1 5543 356888899888888742 11 111221
Q ss_pred --------CCHHHHHHHHc--CccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEE
Q 012947 77 --------TDPPSLHRLCS--QTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLV 146 (452)
Q Consensus 77 --------~d~~sl~~~~~--~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv 146 (452)
..++.+.+++. .+|+|++..-- ..|..-.-++++.|....=.+=|...+.- +.....+++.++.|+
T Consensus 72 ~~~~~~v~~G~~~l~~l~~~~~~D~vv~AivG--~aGL~pt~~Ai~~gk~iaLANKEsLV~aG--~li~~~a~~~~~~I~ 147 (389)
T TIGR00243 72 QGSRTEVLVGEEGICEMAALEDVDQVMNAIVG--AAGLLPTLAAIRAGKTIALANKESLVTAG--HLFLDAVKKYGVQLL 147 (389)
T ss_pred CCCCcEEEECHHHHHHHHcCCCCCEEEEhhhc--HhhHHHHHHHHHCCCcEEEechhHHHhhH--HHHHHHHHHcCCeEE
Confidence 13345555555 46999987522 23334444555666554333333333222 112345566777776
Q ss_pred cC
Q 012947 147 SA 148 (452)
Q Consensus 147 ~~ 148 (452)
+-
T Consensus 148 PV 149 (389)
T TIGR00243 148 PV 149 (389)
T ss_pred ee
Confidence 43
No 495
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=94.54 E-value=0.27 Score=49.13 Aligned_cols=93 Identities=22% Similarity=0.204 Sum_probs=59.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCcc
Q 012947 11 FDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQTK 90 (452)
Q Consensus 11 ~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~d 90 (452)
.+|.|+| .|.+|..++..|.+.+. ..+|.+.+|++++++.+.+ .+ +.... .. +..+.++++|
T Consensus 7 ~~I~IIG-~G~mG~sla~~l~~~g~-----~~~V~~~dr~~~~~~~a~~-~g------~~~~~--~~---~~~~~~~~aD 68 (307)
T PRK07502 7 DRVALIG-IGLIGSSLARAIRRLGL-----AGEIVGADRSAETRARARE-LG------LGDRV--TT---SAAEAVKGAD 68 (307)
T ss_pred cEEEEEe-eCHHHHHHHHHHHhcCC-----CcEEEEEECCHHHHHHHHh-CC------CCcee--cC---CHHHHhcCCC
Confidence 4799998 59999999999998872 1489999999988765543 21 11111 11 2345678999
Q ss_pred EEeecCCCCCCCCHHHHHHH---HHhCCcEEEecCc
Q 012947 91 LLLNCVGPYRLHGDPVAAAC---VHSGCDYLDISGE 123 (452)
Q Consensus 91 vVIn~aGp~~~~~~~vv~ac---~~~g~~yvDlsge 123 (452)
+||.|+.+... ..+++.. ...++..+|+++.
T Consensus 69 vViiavp~~~~--~~v~~~l~~~l~~~~iv~dvgs~ 102 (307)
T PRK07502 69 LVILCVPVGAS--GAVAAEIAPHLKPGAIVTDVGSV 102 (307)
T ss_pred EEEECCCHHHH--HHHHHHHHhhCCCCCEEEeCccc
Confidence 99999965321 2233322 2345567777654
No 496
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=94.52 E-value=0.11 Score=47.21 Aligned_cols=73 Identities=15% Similarity=0.215 Sum_probs=51.5
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEe-------------
Q 012947 9 ELFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTAD------------- 75 (452)
Q Consensus 9 ~~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~D------------- 75 (452)
++.+|+|+|+ |-+|+..++-+...| ++|.+.+.+.+++++... . ....+..+
T Consensus 19 ~p~~vvv~G~-G~vg~gA~~~~~~lG-------a~v~~~d~~~~~~~~~~~-~------~~~~i~~~~~~~~~~~~~~~~ 83 (168)
T PF01262_consen 19 PPAKVVVTGA-GRVGQGAAEIAKGLG-------AEVVVPDERPERLRQLES-L------GAYFIEVDYEDHLERKDFDKA 83 (168)
T ss_dssp -T-EEEEEST-SHHHHHHHHHHHHTT--------EEEEEESSHHHHHHHHH-T------TTEESEETTTTTTTSB-CCHH
T ss_pred CCeEEEEECC-CHHHHHHHHHHhHCC-------CEEEeccCCHHHHHhhhc-c------cCceEEEcccccccccccchh
Confidence 5678999986 999999999999998 899999999988876543 2 12333333
Q ss_pred ------CCCHHHHHHHHcCccEEeecC
Q 012947 76 ------TTDPPSLHRLCSQTKLLLNCV 96 (452)
Q Consensus 76 ------l~d~~sl~~~~~~~dvVIn~a 96 (452)
......+.+.++.+|+||.++
T Consensus 84 ~~~~~~~~~~~~f~~~i~~~d~vI~~~ 110 (168)
T PF01262_consen 84 DYYEHPESYESNFAEFIAPADIVIGNG 110 (168)
T ss_dssp HCHHHCCHHHHHHHHHHHH-SEEEEHH
T ss_pred hhhHHHHHhHHHHHHHHhhCcEEeeec
Confidence 123456778888899999765
No 497
>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.
Probab=94.52 E-value=0.19 Score=49.81 Aligned_cols=99 Identities=13% Similarity=0.171 Sum_probs=57.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecCh-------------------hHHHHHHHHhCCCCCCCcc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNP-------------------TRVKQALQWASPSHSLSIP 70 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~-------------------~kl~~l~~~l~~~~~~~v~ 70 (452)
+.+|+|.|+ |.+|..+++.|+..|. -++.+.+-+. .|.+...+.+.. ..+.+.
T Consensus 19 ~s~VLIvG~-gGLG~EiaKnLalaGV------g~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~e-LNp~V~ 90 (286)
T cd01491 19 KSNVLISGL-GGLGVEIAKNLILAGV------KSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAE-LNPYVP 90 (286)
T ss_pred cCcEEEEcC-CHHHHHHHHHHHHcCC------CeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHH-HCCCCE
Confidence 467999998 6789999999999984 4677766431 233333333321 112333
Q ss_pred EEEEeCCCHHHHHHHHcCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEe
Q 012947 71 ILTADTTDPPSLHRLCSQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDI 120 (452)
Q Consensus 71 ~v~~Dl~d~~sl~~~~~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDl 120 (452)
+...+-. ...+.+++.|+||.|..+.. .-..+-++|.++++.+|..
T Consensus 91 V~~~~~~---~~~~~l~~fdvVV~~~~~~~-~~~~in~~c~~~~ipfI~a 136 (286)
T cd01491 91 VTVSTGP---LTTDELLKFQVVVLTDASLE-DQLKINEFCHSPGIKFISA 136 (286)
T ss_pred EEEEecc---CCHHHHhcCCEEEEecCCHH-HHHHHHHHHHHcCCEEEEE
Confidence 3322211 11245677888888865332 1134556666666655543
No 498
>PRK08374 homoserine dehydrogenase; Provisional
Probab=94.48 E-value=1.9 Score=43.85 Aligned_cols=139 Identities=10% Similarity=0.028 Sum_probs=75.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCC---CCCCceE-EEEEecChhH-------HHHHHHHhCCCCCCCccEEEEeCC-
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNF---PSSPIKS-LALAGRNPTR-------VKQALQWASPSHSLSIPILTADTT- 77 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~---~~~~~~~-v~iagR~~~k-------l~~l~~~l~~~~~~~v~~v~~Dl~- 77 (452)
.++|.|.|- |-+|+.+++.|.++... ...-..+ +.+++|+... ++++.+.... ...+..+.-+..
T Consensus 2 ~i~VaIiG~-GnVG~~~~~~L~~~~~~l~~~~G~~l~VvaV~ds~~~~~~~~Gid~~~l~~~~~~--~~~~~~~~~~~~~ 78 (336)
T PRK08374 2 EVKVSIFGF-GNVGRAVAEVLAEKSRVFKERYGVELKVVSITDTSGTIWLPEDIDLREAKEVKEN--FGKLSNWGNDYEV 78 (336)
T ss_pred eeEEEEECC-CHHHHHHHHHHHHhHHHHHHHcCCCEEEEEEEeCCccccCCCCCChHHHHHhhhc--cCchhhccccccc
Confidence 368999995 99999999998773210 0000144 4455654221 1222221110 111111110000
Q ss_pred CHHHHHHHH--cCccEEeecCCCCCCCCHHHHHHHHHhCCcEEEecCcHHHHHHHHHHHHHHHHhCccEEEcCCCCC-cc
Q 012947 78 DPPSLHRLC--SQTKLLLNCVGPYRLHGDPVAAACVHSGCDYLDISGEPEFMERMEARYHEKAVETGSLLVSACGFD-SI 154 (452)
Q Consensus 78 d~~sl~~~~--~~~dvVIn~aGp~~~~~~~vv~ac~~~g~~yvDlsge~~~~~~~~~~~~~~A~~~gv~iv~~~G~~-s~ 154 (452)
...+..+++ ..+|+||++.++- ....+...|+++|.|.|-.+-. ... .....+.+.|+++++.+....++. ++
T Consensus 79 ~~~~~~ell~~~~~DVvVd~t~~~--~a~~~~~~al~~G~~VVtanK~-~la-~~~~el~~la~~~~~~~~~ea~v~~Gi 154 (336)
T PRK08374 79 YNFSPEEIVEEIDADIVVDVTNDK--NAHEWHLEALKEGKSVVTSNKP-PIA-FHYDELLDLANERNLPYLFEATVMAGT 154 (336)
T ss_pred cCCCHHHHHhcCCCCEEEECCCcH--HHHHHHHHHHhhCCcEEECCHH-HHH-hCHHHHHHHHHHcCCeEEEeccccccC
Confidence 001344555 3689999999653 3367888999999998855421 111 222455677888999888555554 55
Q ss_pred h
Q 012947 155 P 155 (452)
Q Consensus 155 P 155 (452)
|
T Consensus 155 P 155 (336)
T PRK08374 155 P 155 (336)
T ss_pred C
Confidence 5
No 499
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=94.45 E-value=0.12 Score=51.35 Aligned_cols=72 Identities=19% Similarity=0.313 Sum_probs=60.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCCCCCCCccEEEEeCCCHHHHHHHHcCc
Q 012947 10 LFDVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASPSHSLSIPILTADTTDPPSLHRLCSQT 89 (452)
Q Consensus 10 ~~~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~~~~~~v~~v~~Dl~d~~sl~~~~~~~ 89 (452)
+-+++|+|+ |.+|...++-...-+ .+|++.++|.++++++-+.+. .++..+ .+++..+++.+.++
T Consensus 168 ~~kv~iiGG-GvvgtnaAkiA~glg-------A~Vtild~n~~rl~~ldd~f~----~rv~~~---~st~~~iee~v~~a 232 (371)
T COG0686 168 PAKVVVLGG-GVVGTNAAKIAIGLG-------ADVTILDLNIDRLRQLDDLFG----GRVHTL---YSTPSNIEEAVKKA 232 (371)
T ss_pred CccEEEECC-ccccchHHHHHhccC-------CeeEEEecCHHHHhhhhHhhC----ceeEEE---EcCHHHHHHHhhhc
Confidence 457999998 999999999988877 899999999999988877653 333333 56889999999999
Q ss_pred cEEeecC
Q 012947 90 KLLLNCV 96 (452)
Q Consensus 90 dvVIn~a 96 (452)
|+||+.+
T Consensus 233 DlvIgaV 239 (371)
T COG0686 233 DLVIGAV 239 (371)
T ss_pred cEEEEEE
Confidence 9999986
No 500
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=94.42 E-value=0.036 Score=54.91 Aligned_cols=78 Identities=14% Similarity=0.127 Sum_probs=52.0
Q ss_pred eEEEEcCCchHHHHHHHHHHHcCCCCCCCceEEEEEecChhHHHHHHHHhCC---C--CCCCccE-----EEEeCCCHHH
Q 012947 12 DVIILGASGFTGKYVVREALKLFNFPSSPIKSLALAGRNPTRVKQALQWASP---S--HSLSIPI-----LTADTTDPPS 81 (452)
Q Consensus 12 ~ilV~GATG~iG~~va~~L~~~g~~~~~~~~~v~iagR~~~kl~~l~~~l~~---~--~~~~v~~-----v~~Dl~d~~s 81 (452)
+|.|+|+ |.+|..++..|++.| ++|.+.+|++++++++.+.+.. . ....+.- ....+.-..+
T Consensus 3 ~V~VIG~-G~mG~~iA~~la~~G-------~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~ 74 (288)
T PRK09260 3 KLVVVGA-GVMGRGIAYVFAVSG-------FQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLD 74 (288)
T ss_pred EEEEECc-cHHHHHHHHHHHhCC-------CcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCc
Confidence 6899998 999999999999998 7999999999998876543210 0 0000000 0000111134
Q ss_pred HHHHHcCccEEeecCC
Q 012947 82 LHRLCSQTKLLLNCVG 97 (452)
Q Consensus 82 l~~~~~~~dvVIn~aG 97 (452)
+.+.++++|+||-|+.
T Consensus 75 ~~~~~~~aD~Vi~avp 90 (288)
T PRK09260 75 LKAAVADADLVIEAVP 90 (288)
T ss_pred HHHhhcCCCEEEEecc
Confidence 6677889999999873
Done!