BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012949
(452 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O81027|HMGCL_ARATH Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Arabidopsis
thaliana GN=HMGCL PE=1 SV=2
Length = 468
Score = 628 bits (1620), Expect = e-179, Method: Compositional matrix adjust.
Identities = 320/460 (69%), Positives = 362/460 (78%), Gaps = 35/460 (7%)
Query: 1 MSSLEEPLGLDKLPSMSTIDRIQRFSSNACRPSGDGMGMGSCWIEGSSCSTSNSYDEDYD 60
MSSLEEPL DKLPSMST+DRIQRFSS ACRP D +GMG WIEG C+TSNS +D
Sbjct: 36 MSSLEEPLSFDKLPSMSTMDRIQRFSSGACRPRDD-VGMGHRWIEGRDCTTSNSCIDDDK 94
Query: 61 EYTREAFPWRRHTRDMSHGDSFSRRTVSLGRNHKMFGSACD-------IYNSNCNDKDIR 113
+ +E+FPWRRHTR +S G+ R GR + G+ + Y++ N+
Sbjct: 95 SFAKESFPWRRHTRKLSEGEHMFRNISFAGRTSTVSGTLRESKSFKEQKYSTFSNENGTS 154
Query: 114 DITNKFLKGIPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSP 173
I+NK KGIP+FVKIVEVGPRDGLQNEKN VPT VKVELI+RLVSSGLPVVEATSFVSP
Sbjct: 155 HISNKISKGIPKFVKIVEVGPRDGLQNEKNIVPTSVKVELIQRLVSSGLPVVEATSFVSP 214
Query: 174 KWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLWVYLQGF 233
KWVPQLADA+DVM+AV L+GARLPVLTPNLK GF
Sbjct: 215 KWVPQLADAKDVMDAVNTLDGARLPVLTPNLK--------------------------GF 248
Query: 234 EAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVG 293
+AA++AGAKEVAIFASASE+FS SNINC+IE+SL+RYR VA AAK S+PVRGYVSCVVG
Sbjct: 249 QAAVSAGAKEVAIFASASESFSLSNINCTIEESLLRYRVVATAAKEHSVPVRGYVSCVVG 308
Query: 294 CPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVH 353
CPVEG + PSKVAYV KEL+DMGCFEISLGDTIG+GTPG+VVPMLEAVMAVVP +KLAVH
Sbjct: 309 CPVEGPVLPSKVAYVVKELYDMGCFEISLGDTIGIGTPGSVVPMLEAVMAVVPADKLAVH 368
Query: 354 LHDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVETN 413
HDTYGQ+L NIL+SLQMGIS VD S+AGLGGCPYAKGASGNVATEDVVYML+GLGV TN
Sbjct: 369 FHDTYGQALANILVSLQMGISIVDSSIAGLGGCPYAKGASGNVATEDVVYMLNGLGVHTN 428
Query: 414 VDLRKLMLAGDFINKHLGRPSGSKTAIALN-RIAADASKI 452
VDL KL+ AGDFI+KHLGRP+GSK A+ALN RI ADASKI
Sbjct: 429 VDLGKLIAAGDFISKHLGRPNGSKAAVALNRRITADASKI 468
>sp|P97519|HMGCL_RAT Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Rattus norvegicus
GN=Hmgcl PE=2 SV=1
Length = 325
Score = 388 bits (996), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/334 (57%), Positives = 241/334 (72%), Gaps = 26/334 (7%)
Query: 112 IRDITNKFLKGIPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFV 171
+R + + +P+ VKIVEVGPRDGLQNEK+ VPT VK++LI L +GLPV+EATSFV
Sbjct: 18 LRAASTSSMGTLPKRVKIVEVGPRDGLQNEKSIVPTPVKIKLIDMLSEAGLPVIEATSFV 77
Query: 172 SPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLWVYLQ 231
SPKWVPQ+AD DV++ ++ G PVLTPN+K
Sbjct: 78 SPKWVPQMADHSDVLKGIQKFPGINYPVLTPNMK-------------------------- 111
Query: 232 GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCV 291
GFE A+AAGAKEV+IF +ASE F++ N+NCSIE+S R+ V AA+ SI VRGYVSC
Sbjct: 112 GFEEAVAAGAKEVSIFGAASELFTRKNVNCSIEESFQRFDGVMQAARAASISVRGYVSCA 171
Query: 292 VGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLA 351
+GCP EG + P+KVA VAK+L+ MGC+EISLGDTIGVGTPG + ML AV+ VPV LA
Sbjct: 172 LGCPYEGKVSPAKVAEVAKKLYSMGCYEISLGDTIGVGTPGLMKDMLTAVLHEVPVAALA 231
Query: 352 VHLHDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVE 411
VH HDTYGQ+L N L++LQMG+S VD SVAGLGGCPYAKGASGN+ATED+VYML+GLG+
Sbjct: 232 VHCHDTYGQALANTLVALQMGVSVVDSSVAGLGGCPYAKGASGNLATEDLVYMLTGLGIH 291
Query: 412 TNVDLRKLMLAGDFINKHLGRPSGSKTAIALNRI 445
T V+L+KL+ AGDFI + L R + SK A A ++
Sbjct: 292 TGVNLQKLLEAGDFICQALNRKTSSKVAQATCKL 325
>sp|P38060|HMGCL_MOUSE Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Mus musculus
GN=Hmgcl PE=1 SV=2
Length = 325
Score = 387 bits (993), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/334 (57%), Positives = 239/334 (71%), Gaps = 26/334 (7%)
Query: 112 IRDITNKFLKGIPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFV 171
+R ++ + +P+ VKIVEVGPRDGLQNEK+ VPT VK+ LI L +GLPV+EATSFV
Sbjct: 18 LRAVSTSSMGTLPKQVKIVEVGPRDGLQNEKSIVPTPVKIRLIDMLSEAGLPVIEATSFV 77
Query: 172 SPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLWVYLQ 231
SPKWVPQ+AD DV++ ++ G PVLTPN+K
Sbjct: 78 SPKWVPQMADHSDVLKGIQKFPGINYPVLTPNMK-------------------------- 111
Query: 232 GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCV 291
GFE A+AAGAKEV++F + SE F++ N NCSIE+S R+ V AA+ SI VRGYVSC
Sbjct: 112 GFEEAVAAGAKEVSVFGAVSELFTRKNANCSIEESFQRFAGVMQAAQAASISVRGYVSCA 171
Query: 292 VGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLA 351
+GCP EG + P+KVA VAK+L+ MGC+EISLGDTIGVGTPG + ML AVM VPV LA
Sbjct: 172 LGCPYEGKVSPAKVAEVAKKLYSMGCYEISLGDTIGVGTPGLMKDMLTAVMHEVPVTALA 231
Query: 352 VHLHDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVE 411
VH HDTYGQ+L N L++LQMG+S VD SVAGLGGCPYAKGASGN+ATED+VYML+GLG+
Sbjct: 232 VHCHDTYGQALANTLVALQMGVSVVDSSVAGLGGCPYAKGASGNLATEDLVYMLNGLGIH 291
Query: 412 TNVDLRKLMLAGDFINKHLGRPSGSKTAIALNRI 445
T V+L+KL+ AGDFI + L R + SK A A ++
Sbjct: 292 TGVNLQKLLEAGDFICQALNRKTSSKVAQATCKL 325
>sp|P35915|HMGCL_CHICK Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Gallus gallus
GN=HMGCL PE=1 SV=1
Length = 298
Score = 386 bits (992), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/323 (60%), Positives = 237/323 (73%), Gaps = 26/323 (8%)
Query: 123 IPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADA 182
P+ VK+VEVGPRDGLQNEK+ VPT VK+ LI L +GLPV+EATSFVSP+WVPQ+AD
Sbjct: 2 FPQRVKVVEVGPRDGLQNEKSVVPTPVKIRLIDMLSETGLPVIEATSFVSPRWVPQMADH 61
Query: 183 RDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAK 242
+VM+ + L G PVLTPNLK GF+AA+AAGAK
Sbjct: 62 AEVMQGINKLPGVSYPVLTPNLK--------------------------GFQAAVAAGAK 95
Query: 243 EVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPP 302
EV+IF +ASE F+K NINCSIE+SL R+ V +AA+ SIPVRGYVSCV+GCP EG I
Sbjct: 96 EVSIFGAASELFTKKNINCSIEESLERFSEVMNAARAASIPVRGYVSCVLGCPYEGNISA 155
Query: 303 SKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSL 362
+KVA V+K+++ MGC+EISLGD IG+GTPG++ ML AVM VPV LAVH HDTYGQ+L
Sbjct: 156 AKVAEVSKKMYSMGCYEISLGDRIGIGTPGSMKEMLAAVMKEVPVGALAVHCHDTYGQAL 215
Query: 363 PNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVETNVDLRKLMLA 422
NIL++LQMG+S VD SVAGLGGCPYA+GASGNVATED+VYML+GLG+ T VDL+KLM
Sbjct: 216 ANILVALQMGVSVVDASVAGLGGCPYAQGASGNVATEDLVYMLNGLGIHTGVDLQKLMDT 275
Query: 423 GDFINKHLGRPSGSKTAIALNRI 445
G FI L R + SK + A R+
Sbjct: 276 GTFICNALNRRTNSKVSQAACRL 298
>sp|Q29448|HMGCL_BOVIN Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Bos taurus
GN=HMGCL PE=2 SV=2
Length = 325
Score = 383 bits (984), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/334 (57%), Positives = 239/334 (71%), Gaps = 26/334 (7%)
Query: 112 IRDITNKFLKGIPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFV 171
+R ++ + P+ VKIVEVGPRDGLQNEKN VPT VK++LI L +GLPVVEATSFV
Sbjct: 18 LRAVSTSSVGTFPKQVKIVEVGPRDGLQNEKNIVPTPVKIKLIDMLSEAGLPVVEATSFV 77
Query: 172 SPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLWVYLQ 231
SPKWVPQ+AD +V++ ++ G PVLTPN K
Sbjct: 78 SPKWVPQMADHAEVLKGIQKFPGVNYPVLTPNFK-------------------------- 111
Query: 232 GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCV 291
GF+AA+AAGAKEVAIF +ASE F+K NINCSI++SL R+ + AA+ I VRGYVSCV
Sbjct: 112 GFQAAVAAGAKEVAIFGAASELFTKKNINCSIDESLQRFDEILKAARAAGISVRGYVSCV 171
Query: 292 VGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLA 351
+GCP EG I P+KVA V K+L+ MGC+EISLGDTIGVGTPG + ML AV+ VPV LA
Sbjct: 172 LGCPYEGKISPAKVAEVTKKLYSMGCYEISLGDTIGVGTPGAMKDMLSAVLQEVPVTALA 231
Query: 352 VHLHDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVE 411
VH HDTYGQ+L N L +LQMG+S +D SVAGLGGCPYA+GASGN+ATED+VYML+GLG+
Sbjct: 232 VHCHDTYGQALANTLTALQMGVSVMDSSVAGLGGCPYAQGASGNLATEDLVYMLAGLGIH 291
Query: 412 TNVDLRKLMLAGDFINKHLGRPSGSKTAIALNRI 445
T V+L+KL+ AG FI + L R + SK A A ++
Sbjct: 292 TGVNLQKLLEAGAFICQALNRRTNSKVAQATCKL 325
>sp|Q5R9E1|HMGCL_PONAB Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Pongo abelii
GN=HMGCL PE=2 SV=1
Length = 325
Score = 381 bits (979), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/335 (57%), Positives = 238/335 (71%), Gaps = 26/335 (7%)
Query: 111 DIRDITNKFLKGIPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSF 170
+R ++ + +P+ VKIVEVGPRDGLQNEKN V T VK++LI L +GL V+E TSF
Sbjct: 17 SLRAVSTSSMGTLPKRVKIVEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSF 76
Query: 171 VSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLWVYL 230
VSPKWVPQ+ D +V++ ++ G PVLTPNLK
Sbjct: 77 VSPKWVPQMGDHTEVLKGIQKFPGINYPVLTPNLK------------------------- 111
Query: 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSC 290
GFEAA+AAGAKEVAIF +ASE F+K NINCSIE+S R+ A+ AA+ +I VRGYVSC
Sbjct: 112 -GFEAAVAAGAKEVAIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSC 170
Query: 291 VVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKL 350
+GCP EG I P+KVA V K+L+ MGC+EISLGDTIGVGTPG + ML AVM VP+ L
Sbjct: 171 ALGCPYEGKISPAKVAEVTKKLYSMGCYEISLGDTIGVGTPGIMKGMLSAVMQEVPLAAL 230
Query: 351 AVHLHDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGV 410
AVH HDTYGQ+L N L++LQMG+S VD SVAGLGGCPYA+GASGN+ATED+VYML GLG+
Sbjct: 231 AVHCHDTYGQALANTLMALQMGVSVVDSSVAGLGGCPYAQGASGNLATEDLVYMLEGLGI 290
Query: 411 ETNVDLRKLMLAGDFINKHLGRPSGSKTAIALNRI 445
T V+L+KL+ AG+FI + L R + SK A A ++
Sbjct: 291 HTGVNLQKLLEAGNFICQALNRKTSSKVAQATCKL 325
>sp|Q8JZS7|HMGC2_MOUSE 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic OS=Mus
musculus GN=Hmgcll1 PE=2 SV=1
Length = 343
Score = 381 bits (978), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/322 (58%), Positives = 235/322 (72%), Gaps = 26/322 (8%)
Query: 120 LKGIPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQL 179
L G+P +VKIVEVGPRDGLQNEK VPT +K+ELI +L +GL V+E TSFVS +WVPQ+
Sbjct: 41 LPGLPEYVKIVEVGPRDGLQNEKVIVPTDIKIELINQLSQTGLSVIEVTSFVSSRWVPQM 100
Query: 180 ADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAA 239
AD +VM +R G R PVLTPNL QGF+ A+AA
Sbjct: 101 ADHAEVMRGIRQYPGVRYPVLTPNL--------------------------QGFQHAVAA 134
Query: 240 GAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGA 299
GA E+A+F +ASE+FSK NINCSIE+S+ R++ V +A+ + IPVRGYVSC +GCP EG+
Sbjct: 135 GATEIAVFGAASESFSKKNINCSIEESMGRFQEVISSARHMDIPVRGYVSCALGCPYEGS 194
Query: 300 IPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYG 359
I P KV V+K L+ MGC+EISLGDTIGVGTPG++ MLE+VM +P LAVH HDTYG
Sbjct: 195 ITPQKVTEVSKRLYGMGCYEISLGDTIGVGTPGSMKMMLESVMKEIPPGALAVHCHDTYG 254
Query: 360 QSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVETNVDLRKL 419
Q+L NIL +LQMGI+ VD +V+GLGGCPYAKGASGNVATED++YML+G+G+ T VDL K+
Sbjct: 255 QALANILTALQMGINVVDSAVSGLGGCPYAKGASGNVATEDLIYMLNGMGLNTGVDLYKV 314
Query: 420 MLAGDFINKHLGRPSGSKTAIA 441
M AG+FI K + + + SK A A
Sbjct: 315 MEAGEFICKAVNKTTNSKVAQA 336
>sp|Q8HXZ6|HMGCL_MACFA Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Macaca
fascicularis GN=HMGCL PE=2 SV=1
Length = 325
Score = 379 bits (973), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/334 (56%), Positives = 238/334 (71%), Gaps = 26/334 (7%)
Query: 112 IRDITNKFLKGIPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFV 171
+R ++ + +P+ VKIVEVGPRDGLQNEKN V T VK++LI L +GL V+EATSFV
Sbjct: 18 LRAVSTSSMDTLPKQVKIVEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIEATSFV 77
Query: 172 SPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLWVYLQ 231
SPKWVPQ+AD +V++ ++ G PVL PNLK
Sbjct: 78 SPKWVPQMADHAEVLKGIQKFPGITYPVLIPNLK-------------------------- 111
Query: 232 GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCV 291
GFEAA+AAGAKEV+IF +ASE F+K N+NCSIE+S R+ A+ AA+ +I VRGYVSCV
Sbjct: 112 GFEAAVAAGAKEVSIFGAASELFTKKNVNCSIEESFQRFDAILKAAQSANISVRGYVSCV 171
Query: 292 VGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLA 351
+GCP EG I P+KVA V K+ + MGC+EISLGDTIGVGTPG + ML AVM VP LA
Sbjct: 172 LGCPYEGKISPAKVAEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPPAALA 231
Query: 352 VHLHDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVE 411
VH HDTYGQ+L N L++LQMG+S VD SVAGLGGCPYA+GASGN+ATED+VYML GLG+
Sbjct: 232 VHCHDTYGQALANTLMALQMGVSVVDSSVAGLGGCPYAQGASGNLATEDLVYMLEGLGIH 291
Query: 412 TNVDLRKLMLAGDFINKHLGRPSGSKTAIALNRI 445
T V+L+KL+ AG+FI + L R + SK A A ++
Sbjct: 292 TGVNLQKLLEAGNFICQALNRKTSSKVAQATCKL 325
>sp|P35914|HMGCL_HUMAN Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Homo sapiens
GN=HMGCL PE=1 SV=2
Length = 325
Score = 378 bits (971), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/335 (56%), Positives = 236/335 (70%), Gaps = 26/335 (7%)
Query: 111 DIRDITNKFLKGIPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSF 170
+R ++ + +P+ VKIVEVGPRDGLQNEKN V T VK++LI L +GL V+E TSF
Sbjct: 17 SLRAVSTSSMGTLPKRVKIVEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSF 76
Query: 171 VSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLWVYL 230
VSPKWVPQ+ D +V++ ++ G PVLTPNLK
Sbjct: 77 VSPKWVPQMGDHTEVLKGIQKFPGINYPVLTPNLK------------------------- 111
Query: 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSC 290
GFEAA+AAGAKEV IF +ASE F+K NINCSIE+S R+ A+ AA+ +I VRGYVSC
Sbjct: 112 -GFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSC 170
Query: 291 VVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKL 350
+GCP EG I P+KVA V K+ + MGC+EISLGDTIGVGTPG + ML AVM VP+ L
Sbjct: 171 ALGCPYEGKISPAKVAEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPLAAL 230
Query: 351 AVHLHDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGV 410
AVH HDTYGQ+L N L++LQMG+S VD SVAGLGGCPYA+GASGN+ATED+VYML GLG+
Sbjct: 231 AVHCHDTYGQALANTLMALQMGVSVVDSSVAGLGGCPYAQGASGNLATEDLVYMLEGLGI 290
Query: 411 ETNVDLRKLMLAGDFINKHLGRPSGSKTAIALNRI 445
T V+L+KL+ AG+FI + L R + SK A A ++
Sbjct: 291 HTGVNLQKLLEAGNFICQALNRKTSSKVAQATCKL 325
>sp|Q8TB92|HMGC2_HUMAN 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic OS=Homo
sapiens GN=HMGCLL1 PE=1 SV=3
Length = 370
Score = 377 bits (969), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/322 (57%), Positives = 232/322 (72%), Gaps = 26/322 (8%)
Query: 120 LKGIPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQL 179
L G+P FVKIVEVGPRDGLQNEK VPT +K+E I RL +GL V+E TSFVS +WVPQ+
Sbjct: 71 LSGLPEFVKIVEVGPRDGLQNEKVIVPTDIKIEFINRLSQTGLSVIEVTSFVSSRWVPQM 130
Query: 180 ADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAA 239
AD +VM+ + G R PVLTPNL QGF A+AA
Sbjct: 131 ADHTEVMKGIHQYPGVRYPVLTPNL--------------------------QGFHHAVAA 164
Query: 240 GAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGA 299
GA E+++F +ASE+FSK NINCSIE+S+ ++ V +A+ ++IP RGYVSC +GCP EG+
Sbjct: 165 GATEISVFGAASESFSKKNINCSIEESMGKFEEVVKSARHMNIPARGYVSCALGCPYEGS 224
Query: 300 IPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYG 359
I P KV V+K L+ MGC+EISLGDTIGVGTPG++ MLE+VM +P LAVH HDTYG
Sbjct: 225 ITPQKVTEVSKRLYGMGCYEISLGDTIGVGTPGSMKRMLESVMKEIPPGALAVHCHDTYG 284
Query: 360 QSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVETNVDLRKL 419
Q+L NIL +LQMGI+ VD +V+GLGGCPYAKGASGNVATED++YML+GLG+ T V+L K+
Sbjct: 285 QALANILTALQMGINVVDSAVSGLGGCPYAKGASGNVATEDLIYMLNGLGLNTGVNLYKV 344
Query: 420 MLAGDFINKHLGRPSGSKTAIA 441
M AGDFI K + + + SK A A
Sbjct: 345 MEAGDFICKAVNKTTNSKVAQA 366
>sp|A8WG57|HMGC2_DANRE 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic OS=Danio
rerio GN=hmgcll1 PE=2 SV=1
Length = 335
Score = 377 bits (968), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/322 (59%), Positives = 230/322 (71%), Gaps = 26/322 (8%)
Query: 120 LKGIPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQL 179
L +P +VKIVEVGPRDGLQNEK VPT VK++LI L +GLPV+EATSFVS KWV Q+
Sbjct: 36 LPKLPVYVKIVEVGPRDGLQNEKEIVPTEVKIQLIDLLSQTGLPVIEATSFVSSKWVAQM 95
Query: 180 ADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAA 239
AD V++ ++ R PVLTPN+ QGF+AA+AA
Sbjct: 96 ADHTAVLKGIKRSPDVRYPVLTPNI--------------------------QGFQAAVAA 129
Query: 240 GAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGA 299
GA EVA+F SASE FS+ NINCSIE+SL R+ V AAK IPVRGYVSC +GCP EG
Sbjct: 130 GANEVAVFGSASETFSRKNINCSIEESLQRFEQVVSAAKQEGIPVRGYVSCALGCPYEGQ 189
Query: 300 IPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYG 359
+ PS+V VAK L ++GC+E+SLGDTIGVGT G++ ML V+ VP LAVH HDTYG
Sbjct: 190 VKPSQVTKVAKRLFELGCYEVSLGDTIGVGTAGSMAEMLSDVLTEVPAGALAVHCHDTYG 249
Query: 360 QSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVETNVDLRKL 419
Q+LPNILI+LQMG+S VD SVAGLGGCP+AKGASGNV+TED++YML GLG+ET VDL K+
Sbjct: 250 QALPNILIALQMGVSVVDASVAGLGGCPFAKGASGNVSTEDLLYMLHGLGIETGVDLLKV 309
Query: 420 MLAGDFINKHLGRPSGSKTAIA 441
M AGDFI K L R + SK + A
Sbjct: 310 MEAGDFICKALNRKTNSKVSQA 331
>sp|D4A5C3|HMGC2_RAT 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic OS=Rattus
norvegicus GN=Hmgcll1 PE=1 SV=1
Length = 343
Score = 374 bits (961), Expect = e-103, Method: Compositional matrix adjust.
Identities = 183/322 (56%), Positives = 231/322 (71%), Gaps = 26/322 (8%)
Query: 120 LKGIPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQL 179
L G+P +VKIVEVGPRDGLQNEK VPT +K+E I +L +GL V+E TSFVS +WVPQ+
Sbjct: 41 LSGLPEYVKIVEVGPRDGLQNEKVIVPTDIKIEFINQLSQTGLSVIEVTSFVSSRWVPQM 100
Query: 180 ADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAA 239
AD +VM + G R PVL PNL QG + A+AA
Sbjct: 101 ADHAEVMGGIHQYPGVRYPVLVPNL--------------------------QGLQHAVAA 134
Query: 240 GAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGA 299
GA E+A+F +ASE+FSK NINCSIE+S+ R+ V +A+ ++IPVRGYVSC +GCP EG+
Sbjct: 135 GATEIAVFGAASESFSKKNINCSIEESMGRFEQVISSARHMNIPVRGYVSCALGCPYEGS 194
Query: 300 IPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYG 359
I P KV V+K L+ MGC+EISLGDT+GVGTPG++ MLE+VM +P LAVH HDTYG
Sbjct: 195 IMPQKVTEVSKRLYSMGCYEISLGDTVGVGTPGSMKTMLESVMKEIPPGALAVHCHDTYG 254
Query: 360 QSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVETNVDLRKL 419
Q+L NIL +LQMGI+ VD +V+GLGGCPYAKGASGNVATED++YML+G+G+ T VDL K+
Sbjct: 255 QALANILTALQMGINVVDSAVSGLGGCPYAKGASGNVATEDLIYMLNGMGLNTGVDLHKV 314
Query: 420 MLAGDFINKHLGRPSGSKTAIA 441
M AGDFI K + + + SK A A
Sbjct: 315 MEAGDFICKAVNKTTNSKVAQA 336
>sp|P13703|HMGCL_PSEMV Hydroxymethylglutaryl-CoA lyase OS=Pseudomonas mevalonii GN=mvaB
PE=3 SV=1
Length = 301
Score = 275 bits (703), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 150/316 (47%), Positives = 196/316 (62%), Gaps = 26/316 (8%)
Query: 127 VKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVM 186
VK+ EVGPRDGLQNE+ + +V LI L +GL +EA +FVSP+WVPQ+A + +V+
Sbjct: 4 VKVFEVGPRDGLQNERQPLSVAARVGLIGELAGTGLRHIEAGAFVSPRWVPQMAGSDEVL 63
Query: 187 EAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAI 246
+ +G L PN QGFEAA AG +EVA+
Sbjct: 64 RQLPSNDGVSYTALVPN--------------------------RQGFEAAQRAGCREVAV 97
Query: 247 FASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVA 306
FA+ASEAFS++NINCSI++S R+ V AA SI VRGYVSCV+GCP GA+ P VA
Sbjct: 98 FAAASEAFSRNNINCSIDESFERFTPVLRAANEASIRVRGYVSCVLGCPFSGAVAPEAVA 157
Query: 307 YVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNIL 366
VA+ L+++GC+EISLGDTIG G P + E +PV LA H HDT+G ++ N+
Sbjct: 158 KVARRLYELGCYEISLGDTIGAGRPDETAQLFELCARQLPVAALAGHFHDTWGMAIANVH 217
Query: 367 ISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVETNVDLRKLMLAGDFI 426
+L G+ T D SVAGLGGCPY+ GASGNVATED++Y+L GLG T VDL + G I
Sbjct: 218 AALAQGVRTFDSSVAGLGGCPYSPGASGNVATEDLLYLLHGLGYSTGVDLEAVAQVGVRI 277
Query: 427 NKHLGRPSGSKTAIAL 442
+ LG + S+ +AL
Sbjct: 278 SAQLGTANRSRAGLAL 293
>sp|O34873|HMGCL_BACSU Hydroxymethylglutaryl-CoA lyase YngG OS=Bacillus subtilis (strain
168) GN=yngG PE=1 SV=1
Length = 299
Score = 246 bits (628), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 131/314 (41%), Positives = 181/314 (57%), Gaps = 26/314 (8%)
Query: 124 PRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADAR 183
P+ V I EVGPRDGLQNE + T K+ I +L +GL +E TSFV PKW+P L DA
Sbjct: 4 PKKVTIKEVGPRDGLQNEPVWIATEDKITWINQLSRTGLSYIEITSFVHPKWIPALRDAI 63
Query: 184 DVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKE 243
DV + + +G L PN QR G E A+ G E
Sbjct: 64 DVAKGIDREKGVTYAALVPN-----QR---------------------GLENALEGGINE 97
Query: 244 VAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPS 303
+F SASE ++ NIN S +SL + V + A+ ++ R Y+S V GCP E +P
Sbjct: 98 ACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIE 157
Query: 304 KVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLP 363
+V +++ L + G E+SLGDTIG P V +LEA++A P ++A+H HDT G +L
Sbjct: 158 QVIRLSEALFEFGISELSLGDTIGAANPAQVETVLEALLARFPANQIALHFHDTRGTALA 217
Query: 364 NILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVETNVDLRKLMLAG 423
N++ +LQMGI+ D S GLGGCPYA G+SGN ATED+VYML + ++TNV L KL+ A
Sbjct: 218 NMVTALQMGITVFDGSAGGLGGCPYAPGSSGNAATEDIVYMLEQMDIKTNVKLEKLLSAA 277
Query: 424 DFINKHLGRPSGSK 437
+I + +G+P S+
Sbjct: 278 KWIEEKMGKPLPSR 291
>sp|Q3ACM0|HOA_CARHZ 4-hydroxy-2-oxovalerate aldolase OS=Carboxydothermus
hydrogenoformans (strain Z-2901 / DSM 6008) GN=mhpE PE=3
SV=1
Length = 336
Score = 65.9 bits (159), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 70/136 (51%), Gaps = 8/136 (5%)
Query: 300 IPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYG 359
+PP K+ AK G + + D+ G TP V +EAV A V V + H H+ G
Sbjct: 142 VPPEKLVEQAKLFESYGADAVYITDSAGAMTPYDVKVRIEAVKAAVSV-PVGFHAHNNLG 200
Query: 360 QSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVETNVDLRKL 419
++ N L +++ G + VD + GLG +GN TE +V +L+ LG ET VDL K+
Sbjct: 201 LAIGNTLAAIEAGATYVDGTARGLG------AGAGNSQTEILVAVLAKLGYETGVDLYKI 254
Query: 420 M-LAGDFINKHLGRPS 434
M +A + + + RP
Sbjct: 255 MDVAEEVVAPKMRRPQ 270
>sp|Q764S0|HOA_BACPJ 4-hydroxy-2-oxovalerate aldolase OS=Bacillus sp. (strain JF8)
GN=nahM PE=3 SV=2
Length = 337
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 68/127 (53%), Gaps = 7/127 (5%)
Query: 300 IPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYG 359
+ P ++A AK + G + + D+ G P V+ + A+ V+ V + H H+ G
Sbjct: 143 LSPEELAQQAKLMESYGADIVYIVDSAGTMLPQDVIDRVIALKKVLNV-PIGFHAHNNLG 201
Query: 360 QSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVETNVDLRKL 419
++ N L ++Q G + +D S GLG SGN TE +V +LS +G+ET +DL ++
Sbjct: 202 LAIGNSLAAIQAGATNIDASTRGLGA------GSGNTQTEVLVAVLSRMGIETGIDLFQI 255
Query: 420 MLAGDFI 426
M A ++I
Sbjct: 256 MDAAEYI 262
>sp|A3DF94|LEU1_CLOTH 2-isopropylmalate synthase OS=Clostridium thermocellum (strain ATCC
27405 / DSM 1237) GN=leuA PE=3 SV=1
Length = 511
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 135/318 (42%), Gaps = 49/318 (15%)
Query: 125 RFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVE-ATSFVSPKWVPQLADAR 183
R ++I + RDG Q + KV++ ++L G+ V+E SP D
Sbjct: 2 RRIRIFDTTLRDGEQTPGVNLNIQEKVDIAKQLARLGVDVIEPGFPLTSP------GDFE 55
Query: 184 DVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKE 243
V R++EG P + + I+ R I W +A A K
Sbjct: 56 AVQRIAREVEG---PYICGFSRAII-RDI-----------DETW------KAIKDAQKKC 94
Query: 244 VAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPS 303
IF S+S+ K + + +D L ++ + AK Y V P++ +
Sbjct: 95 FHIFISSSDIQIKHQLGKTEKDVLEIVKSTVYHAK-------QYTDEVEYSPMDASRTRL 147
Query: 304 KVAY-VAKELHDMGCFEISLGDTIGVGTP---GTVVPMLEAVMAVVPVEKLAVHLHDTYG 359
+ Y V + D G I++ DT+G TP G ++ + + + ++VH H+ G
Sbjct: 148 EFLYEVIEAAIDNGATVINIPDTVGYATPIEFGELIQKIRKNVRNIDKAIISVHCHNDLG 207
Query: 360 QSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSG----LGVETNVD 415
++ N +++ G ++C++ G+G +GN A E+VV ++ LG ET +D
Sbjct: 208 MAVANSIVAAMNGAQQIECTINGVG------ERAGNAALEEVVTHIAARKDYLGFETGID 261
Query: 416 LRKLMLAGDFINKHLGRP 433
L +L +++++G P
Sbjct: 262 LSQLYKTSKIVSRYMGIP 279
>sp|Q8ZW35|LEU1_PYRAE Probable 2-isopropylmalate synthase OS=Pyrobaculum aerophilum
(strain ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC
100827) GN=leuA PE=3 SV=1
Length = 364
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 87/201 (43%), Gaps = 13/201 (6%)
Query: 234 EAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVG 293
+AA A + +F + S+ K + + E++L R V AK + +
Sbjct: 65 DAAAEADVDMIHLFIATSDIHLKYKLGITREEALRRIEEVVSYAKSYGVEILFSAEDATR 124
Query: 294 CPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVH 353
+E K A A G EI++ DT+GV TP + +++ + +P + VH
Sbjct: 125 SDLEFLAKAYKTAIEA------GADEINVPDTVGVMTPSRMAYLIKYLRERLPPIPMHVH 178
Query: 354 LHDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSG-LGVET 412
HD +G ++ N + +++ G V G +GN A E+VV + LG+ T
Sbjct: 179 CHDDFGMAVANTVTAIENGADVAQVVVNNFG------ERAGNAALEEVVAAVHYLLGLRT 232
Query: 413 NVDLRKLMLAGDFINKHLGRP 433
N+ L KL ++K G P
Sbjct: 233 NIKLEKLYSLSQLVSKLFGVP 253
>sp|Q9FG67|MAM1_ARATH Methylthioalkylmalate synthase 1, chloroplastic OS=Arabidopsis
thaliana GN=MAM1 PE=1 SV=1
Length = 506
Score = 58.5 bits (140), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 147/361 (40%), Gaps = 51/361 (14%)
Query: 91 RNHKMFGSACDIYNSNC--NDKDIRDITNKFLKGIPR------FVKIVEVGPRDGLQNEK 142
+N +F S C + N + D++ + ++ + IP +V++ + RDG Q+
Sbjct: 41 KNPALFISCCSSVSKNAATSSTDLKPVVERWPEYIPNKLPDGNYVRVFDTTLRDGEQSPG 100
Query: 143 NTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVR---DLEGARLPV 199
++ K+E+ R+L + ++E S + +L + + + V D E +PV
Sbjct: 101 GSLTPPQKLEIARQLAKLRVDIMEVGFPGSSE--EELETIKTIAKTVGNEVDEETGYVPV 158
Query: 200 LTPNLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNI 259
+ +C I + W EA A + +F S S+ K +
Sbjct: 159 ICA-----------IARCKHRDIEAT-W------EALKYAKRPRILVFTSTSDIHMKYKL 200
Query: 260 NCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFE 319
+ E+ + + AK L G+ GC G + + E G
Sbjct: 201 KKTQEEVIEMAVSSIRFAKSL-----GFNDIQFGCEDGGRSDKDFLCKILGEAIKAGVTV 255
Query: 320 ISLGDTIGVGTP---GTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTV 376
+++GDT+G+ P G +V L+A + +AVH H+ G + N + ++ G V
Sbjct: 256 VTIGDTVGINMPHEYGELVTYLKANTPGIDDVVVAVHCHNDLGLATANSIAGIRAGARQV 315
Query: 377 DCSVAGLGGCPYAKGASGNVATEDVVYMLSGL------GVETNVDLRKLMLAGDFINKHL 430
+ ++ G+G SGN + E+VV L GV T +D R++M + ++
Sbjct: 316 EVTINGIG------ERSGNASLEEVVMALKCRGAYVINGVYTKIDTRQIMATSKMVQEYT 369
Query: 431 G 431
G
Sbjct: 370 G 370
>sp|B8I1T7|LEU1_CLOCE 2-isopropylmalate synthase OS=Clostridium cellulolyticum (strain
ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=leuA PE=3
SV=1
Length = 508
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 129/298 (43%), Gaps = 50/298 (16%)
Query: 123 IPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEA-TSFVSPKWVPQLAD 181
+ R +KI + RDG Q + K+E+ ++LV G+ V+E + SP D
Sbjct: 1 MARTIKIFDTTLRDGEQTPGVNLNLQEKLEIAKQLVRLGVDVIEGGFAIASP------GD 54
Query: 182 ARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGA 241
+M R+L+G + L +++ + R+ W EA A +
Sbjct: 55 FESIMTLSRNLKGVTIASLCRSVEKDIDRA---------------W------EAVQYAES 93
Query: 242 KEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIP 301
+ F + S+ K + + E+ L R ++ AK GY S V + +
Sbjct: 94 PRIHTFIATSDIHMKYKLKMTEEEVLERAVSMVKRAK-------GYCSNVEFSAEDASRT 146
Query: 302 PSKVAY-VAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVP-VEK--LAVHLHDT 357
+ Y V + + G +++ DT+G TP ++ + VP ++K ++VH H+
Sbjct: 147 REEFLYRVVEAVIKAGATTVNIPDTVGYSTPLEFGRLIRNIRNNVPNIDKADISVHCHND 206
Query: 358 YGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVETNVD 415
G ++ N L +++ G V+C++ GLG +GN A E+++ +G+ T D
Sbjct: 207 LGLAVANSLAAVENGAVQVECTINGLG------ERAGNAALEEII-----MGINTRKD 253
>sp|A8FQ83|LEU1_SHESH 2-isopropylmalate synthase OS=Shewanella sediminis (strain HAW-EB3)
GN=leuA PE=3 SV=1
Length = 523
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 76/154 (49%), Gaps = 13/154 (8%)
Query: 294 CPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVP-VEK--L 350
C G P + + +E G I++ DT+G P ++E + VP +++ +
Sbjct: 140 CEDAGRTPIDNLCRMVEEAIKAGARTINIPDTVGYTIPSEFGGIIETLFNRVPNIDQAII 199
Query: 351 AVHLHDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLS---- 406
+VH HD G S+ N + ++Q G ++C+V G+G +GN + E++ +LS
Sbjct: 200 SVHCHDDLGLSVANSITAVQQGARQIECTVNGIG------ERAGNCSLEEIAMILSTRKD 253
Query: 407 GLGVETNVDLRKLMLAGDFINKHLGRPSGSKTAI 440
LG+ET ++ +++ + +++ P + AI
Sbjct: 254 SLGLETGINAKEIHRTSNLVSQLCNMPVQANKAI 287
>sp|B1KKZ4|LEU1_SHEWM 2-isopropylmalate synthase OS=Shewanella woodyi (strain ATCC 51908
/ MS32) GN=leuA PE=3 SV=1
Length = 523
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 75/154 (48%), Gaps = 13/154 (8%)
Query: 294 CPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVP-VEK--L 350
C G P + + +E G I++ DT+G P ++E + VP +++ +
Sbjct: 140 CEDAGRTPIDNLCRMVEEAIKAGAKTINIPDTVGYTVPSEFGGIIETLFNRVPNIDQAVI 199
Query: 351 AVHLHDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLS---- 406
+VH HD G S+ N + ++Q G ++C+V G+G +GN + E++ +LS
Sbjct: 200 SVHCHDDLGLSVANSITAVQQGARQIECTVNGIG------ERAGNCSLEEIAMILSTRKA 253
Query: 407 GLGVETNVDLRKLMLAGDFINKHLGRPSGSKTAI 440
LG+ET ++ +++ +++ P + AI
Sbjct: 254 ALGLETGINAKEIHRTSSLVSQLCNMPVQANKAI 287
>sp|A4SR62|LEU1_AERS4 2-isopropylmalate synthase OS=Aeromonas salmonicida (strain A449)
GN=leuA PE=3 SV=1
Length = 524
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 86/190 (45%), Gaps = 23/190 (12%)
Query: 234 EAAIAAGAKEVAIFASASEAFSKSNINCSIEDSL-VRYRAVAHAAKVLSIPVRGYVSCV- 291
EA A A + F S S +S + S ED L + A+ HA + Y V
Sbjct: 86 EALRVAEAFRIHTFISTSSIHVESKLKKSFEDVLEMGVSAIKHALR--------YTDDVE 137
Query: 292 VGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVP-VEK- 349
C G P + + + G I++ DT+G P +++ + VP ++K
Sbjct: 138 FSCEDAGRTPIDNLCRMVEAAIKAGARTINIPDTVGYTVPTEFSGIIQTLFNRVPNIDKA 197
Query: 350 -LAVHLHDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSG- 407
++VH HD G S+ N + ++QMG ++C++ G+G +GN + E+V +L
Sbjct: 198 IISVHCHDDLGLSVANSIGAVQMGARQIECTINGIG------ERAGNCSLEEVAMILKTR 251
Query: 408 ---LGVETNV 414
LGV TN+
Sbjct: 252 ADLLGVHTNI 261
>sp|A1JJH7|LEU1_YERE8 2-isopropylmalate synthase OS=Yersinia enterocolitica serotype O:8
/ biotype 1B (strain 8081) GN=leuA PE=3 SV=1
Length = 520
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 101/227 (44%), Gaps = 21/227 (9%)
Query: 234 EAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCV-V 292
EA A A + +F + S +S + S +D L H+ K R Y V
Sbjct: 86 EALRIAEAFRIHVFLATSTLHIESKLKRSFDDVLA---MAVHSVK----RARNYTDDVEF 138
Query: 293 GCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVP-VEK-- 349
C G P + + + + G I++ DT+G TP ++ + VP ++K
Sbjct: 139 SCEDAGRTPIDNLCRIVEAAINAGATTINIPDTVGYTTPYQFGGIITDLYQRVPNIDKAI 198
Query: 350 LAVHLHDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYML---- 405
++VH HD G S+ N + ++Q G V+ ++ GLG +GN + E+V+ +
Sbjct: 199 ISVHCHDDLGMSVANSITAVQAGARQVEGTINGLG------ERAGNCSLEEVIMAIKVRE 252
Query: 406 SGLGVETNVDLRKLMLAGDFINKHLGRPSGSKTAIALNRIAADASKI 452
+ LGV TN++ +++ ++K P + AI + A +S I
Sbjct: 253 NMLGVHTNINHQEIYRTSQLVSKLCNMPIPANKAIVGSNAFAHSSGI 299
>sp|A0KGM9|LEU1_AERHH 2-isopropylmalate synthase OS=Aeromonas hydrophila subsp.
hydrophila (strain ATCC 7966 / NCIB 9240) GN=leuA PE=3
SV=1
Length = 524
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 86/190 (45%), Gaps = 23/190 (12%)
Query: 234 EAAIAAGAKEVAIFASASEAFSKSNINCSIEDSL-VRYRAVAHAAKVLSIPVRGYVSCV- 291
EA A A + F S S +S + S ED L + A+ HA R Y V
Sbjct: 86 EALRVAEAFRIHTFISTSSIHVESKLKKSFEDVLEMGVSAIKHA--------RRYTDDVE 137
Query: 292 VGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVP-VEK- 349
C G P + + + G I++ DT+G P +++ + VP +++
Sbjct: 138 FSCEDAGRTPIDNLCRMVEAAIKAGARTINIPDTVGYTVPTEFSGIIQTLFNRVPNIDQA 197
Query: 350 -LAVHLHDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSG- 407
++VH HD G S+ N + ++QMG ++C++ G+G +GN + E+V +L
Sbjct: 198 IISVHCHDDLGLSVANSIGAVQMGARQIECTINGIG------ERAGNCSLEEVAMILKTR 251
Query: 408 ---LGVETNV 414
LGV TN+
Sbjct: 252 ADLLGVHTNI 261
>sp|B1JK98|LEU1_YERPY 2-isopropylmalate synthase OS=Yersinia pseudotuberculosis serotype
O:3 (strain YPIII) GN=leuA PE=3 SV=1
Length = 520
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 97/222 (43%), Gaps = 22/222 (9%)
Query: 234 EAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCV-V 292
EA A A + +F + S +S + S +D L H+ K R Y V
Sbjct: 86 EALRIAEAFRIHVFLATSTLHIESKLKRSFDDVLA---MAVHSVK----RARNYTDDVEF 138
Query: 293 GCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVP-VEK-- 349
C G P + V + G I++ DT+G TP ++ + VP ++K
Sbjct: 139 SCEDAGRTPIDNLCRVVEAAITAGATTINIPDTVGYTTPYQFGGIITDLYERVPNIDKAI 198
Query: 350 LAVHLHDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYML---- 405
++VH HD G S+ N + ++Q G V+ ++ GLG +GN + E+V+ +
Sbjct: 199 ISVHCHDDLGMSVANSITAVQAGARQVEGTINGLG------ERAGNCSLEEVIMAIKVRH 252
Query: 406 SGLGVETNVDLRKLMLAGDFINKHLGRP-SGSKTAIALNRIA 446
LGV TN++ +++ ++K P G+K + N A
Sbjct: 253 EMLGVHTNINHQEIYRTSQLVSKICNMPIPGNKAIVGSNAFA 294
>sp|Q66EM1|LEU1_YERPS 2-isopropylmalate synthase OS=Yersinia pseudotuberculosis serotype
I (strain IP32953) GN=leuA PE=3 SV=1
Length = 520
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 97/222 (43%), Gaps = 22/222 (9%)
Query: 234 EAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCV-V 292
EA A A + +F + S +S + S +D L H+ K R Y V
Sbjct: 86 EALRIAEAFRIHVFLATSTLHIESKLKRSFDDVLA---MAVHSVK----RARNYTDDVEF 138
Query: 293 GCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVP-VEK-- 349
C G P + V + G I++ DT+G TP ++ + VP ++K
Sbjct: 139 SCEDAGRTPIDNLCRVVEAAITAGATTINIPDTVGYTTPYQFGGIITDLYERVPNIDKAI 198
Query: 350 LAVHLHDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYML---- 405
++VH HD G S+ N + ++Q G V+ ++ GLG +GN + E+V+ +
Sbjct: 199 ISVHCHDDLGMSVANSITAVQAGARQVEGTINGLG------ERAGNCSLEEVIMAIKVRH 252
Query: 406 SGLGVETNVDLRKLMLAGDFINKHLGRP-SGSKTAIALNRIA 446
LGV TN++ +++ ++K P G+K + N A
Sbjct: 253 EMLGVHTNINHQEIYRTSQLVSKICNMPIPGNKAIVGSNAFA 294
>sp|A4TQA2|LEU1_YERPP 2-isopropylmalate synthase OS=Yersinia pestis (strain Pestoides F)
GN=leuA PE=3 SV=1
Length = 520
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 97/222 (43%), Gaps = 22/222 (9%)
Query: 234 EAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCV-V 292
EA A A + +F + S +S + S +D L H+ K R Y V
Sbjct: 86 EALRIAEAFRIHVFLATSTLHIESKLKRSFDDVLA---MAVHSVK----RARNYTDDVEF 138
Query: 293 GCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVP-VEK-- 349
C G P + V + G I++ DT+G TP ++ + VP ++K
Sbjct: 139 SCEDAGRTPIDNLCRVVEAAITAGATTINIPDTVGYTTPYQFGGIITDLYERVPNIDKAI 198
Query: 350 LAVHLHDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYML---- 405
++VH HD G S+ N + ++Q G V+ ++ GLG +GN + E+V+ +
Sbjct: 199 ISVHCHDDLGMSVANSITAVQAGARQVEGTINGLG------ERAGNCSLEEVIMAIKVRH 252
Query: 406 SGLGVETNVDLRKLMLAGDFINKHLGRP-SGSKTAIALNRIA 446
LGV TN++ +++ ++K P G+K + N A
Sbjct: 253 EMLGVHTNINHQEIYRTSQLVSKICNMPIPGNKAIVGSNAFA 294
>sp|Q1CMP5|LEU1_YERPN 2-isopropylmalate synthase OS=Yersinia pestis bv. Antiqua (strain
Nepal516) GN=leuA PE=3 SV=1
Length = 520
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 97/222 (43%), Gaps = 22/222 (9%)
Query: 234 EAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCV-V 292
EA A A + +F + S +S + S +D L H+ K R Y V
Sbjct: 86 EALRIAEAFRIHVFLATSTLHIESKLKRSFDDVLA---MAVHSVK----RARNYTDDVEF 138
Query: 293 GCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVP-VEK-- 349
C G P + V + G I++ DT+G TP ++ + VP ++K
Sbjct: 139 SCEDAGRTPIDNLCRVVEAAITAGATTINIPDTVGYTTPYQFGGIITDLYERVPNIDKAI 198
Query: 350 LAVHLHDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYML---- 405
++VH HD G S+ N + ++Q G V+ ++ GLG +GN + E+V+ +
Sbjct: 199 ISVHCHDDLGMSVANSITAVQAGARQVEGTINGLG------ERAGNCSLEEVIMAIKVRH 252
Query: 406 SGLGVETNVDLRKLMLAGDFINKHLGRP-SGSKTAIALNRIA 446
LGV TN++ +++ ++K P G+K + N A
Sbjct: 253 EMLGVHTNINHQEIYRTSQLVSKICNMPIPGNKAIVGSNAFA 294
>sp|A9R142|LEU1_YERPG 2-isopropylmalate synthase OS=Yersinia pestis bv. Antiqua (strain
Angola) GN=leuA PE=3 SV=1
Length = 520
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 97/222 (43%), Gaps = 22/222 (9%)
Query: 234 EAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCV-V 292
EA A A + +F + S +S + S +D L H+ K R Y V
Sbjct: 86 EALRIAEAFRIHVFLATSTLHIESKLKRSFDDVLA---MAVHSVK----RARNYTDDVEF 138
Query: 293 GCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVP-VEK-- 349
C G P + V + G I++ DT+G TP ++ + VP ++K
Sbjct: 139 SCEDAGRTPIDNLCRVVEAAITAGATTINIPDTVGYTTPYQFGGIITDLYERVPNIDKAI 198
Query: 350 LAVHLHDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYML---- 405
++VH HD G S+ N + ++Q G V+ ++ GLG +GN + E+V+ +
Sbjct: 199 ISVHCHDDLGMSVANSITAVQAGARQVEGTINGLG------ERAGNCSLEEVIMAIKVRH 252
Query: 406 SGLGVETNVDLRKLMLAGDFINKHLGRP-SGSKTAIALNRIA 446
LGV TN++ +++ ++K P G+K + N A
Sbjct: 253 EMLGVHTNINHQEIYRTSQLVSKICNMPIPGNKAIVGSNAFA 294
>sp|Q8ZIG8|LEU1_YERPE 2-isopropylmalate synthase OS=Yersinia pestis GN=leuA PE=3 SV=1
Length = 520
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 97/222 (43%), Gaps = 22/222 (9%)
Query: 234 EAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCV-V 292
EA A A + +F + S +S + S +D L H+ K R Y V
Sbjct: 86 EALRIAEAFRIHVFLATSTLHIESKLKRSFDDVLA---MAVHSVK----RARNYTDDVEF 138
Query: 293 GCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVP-VEK-- 349
C G P + V + G I++ DT+G TP ++ + VP ++K
Sbjct: 139 SCEDAGRTPIDNLCRVVEAAITAGATTINIPDTVGYTTPYQFGGIITDLYERVPNIDKAI 198
Query: 350 LAVHLHDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYML---- 405
++VH HD G S+ N + ++Q G V+ ++ GLG +GN + E+V+ +
Sbjct: 199 ISVHCHDDLGMSVANSITAVQAGARQVEGTINGLG------ERAGNCSLEEVIMAIKVRH 252
Query: 406 SGLGVETNVDLRKLMLAGDFINKHLGRP-SGSKTAIALNRIA 446
LGV TN++ +++ ++K P G+K + N A
Sbjct: 253 EMLGVHTNINHQEIYRTSQLVSKICNMPIPGNKAIVGSNAFA 294
>sp|B2K4C9|LEU1_YERPB 2-isopropylmalate synthase OS=Yersinia pseudotuberculosis serotype
IB (strain PB1/+) GN=leuA PE=3 SV=1
Length = 520
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 97/222 (43%), Gaps = 22/222 (9%)
Query: 234 EAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCV-V 292
EA A A + +F + S +S + S +D L H+ K R Y V
Sbjct: 86 EALRIAEAFRIHVFLATSTLHIESKLKRSFDDVLA---MAVHSVK----RARNYTDDVEF 138
Query: 293 GCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVP-VEK-- 349
C G P + V + G I++ DT+G TP ++ + VP ++K
Sbjct: 139 SCEDAGRTPIDNLCRVVEAAITAGATTINIPDTVGYTTPYQFGGIITDLYERVPNIDKAI 198
Query: 350 LAVHLHDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYML---- 405
++VH HD G S+ N + ++Q G V+ ++ GLG +GN + E+V+ +
Sbjct: 199 ISVHCHDDLGMSVANSITAVQAGARQVEGTINGLG------ERAGNCSLEEVIMAIKVRH 252
Query: 406 SGLGVETNVDLRKLMLAGDFINKHLGRP-SGSKTAIALNRIA 446
LGV TN++ +++ ++K P G+K + N A
Sbjct: 253 EMLGVHTNINHQEIYRTSQLVSKICNMPIPGNKAIVGSNAFA 294
>sp|Q1C1Z6|LEU1_YERPA 2-isopropylmalate synthase OS=Yersinia pestis bv. Antiqua (strain
Antiqua) GN=leuA PE=3 SV=1
Length = 520
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 97/222 (43%), Gaps = 22/222 (9%)
Query: 234 EAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCV-V 292
EA A A + +F + S +S + S +D L H+ K R Y V
Sbjct: 86 EALRIAEAFRIHVFLATSTLHIESKLKRSFDDVLA---MAVHSVK----RARNYTDDVEF 138
Query: 293 GCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVP-VEK-- 349
C G P + V + G I++ DT+G TP ++ + VP ++K
Sbjct: 139 SCEDAGRTPIDNLCRVVEAAITAGATTINIPDTVGYTTPYQFGGIITDLYERVPNIDKAI 198
Query: 350 LAVHLHDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYML---- 405
++VH HD G S+ N + ++Q G V+ ++ GLG +GN + E+V+ +
Sbjct: 199 ISVHCHDDLGMSVANSITAVQAGARQVEGTINGLG------ERAGNCSLEEVIMAIKVRH 252
Query: 406 SGLGVETNVDLRKLMLAGDFINKHLGRP-SGSKTAIALNRIA 446
LGV TN++ +++ ++K P G+K + N A
Sbjct: 253 EMLGVHTNINHQEIYRTSQLVSKICNMPIPGNKAIVGSNAFA 294
>sp|A7FM84|LEU1_YERP3 2-isopropylmalate synthase OS=Yersinia pseudotuberculosis serotype
O:1b (strain IP 31758) GN=leuA PE=3 SV=1
Length = 520
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 97/222 (43%), Gaps = 22/222 (9%)
Query: 234 EAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCV-V 292
EA A A + +F + S +S + S +D L H+ K R Y V
Sbjct: 86 EALRIAEAFRIHVFLATSTLHIESKLKRSFDDVLA---MAVHSVK----RARNYTDDVEF 138
Query: 293 GCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVP-VEK-- 349
C G P + V + G I++ DT+G TP ++ + VP ++K
Sbjct: 139 SCEDAGRTPIDNLCRVVEAAITAGATTINIPDTVGYTTPYQFGGIITDLYERVPNIDKAI 198
Query: 350 LAVHLHDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYML---- 405
++VH HD G S+ N + ++Q G V+ ++ GLG +GN + E+V+ +
Sbjct: 199 ISVHCHDDLGMSVANSITAVQAGARQVEGTINGLG------ERAGNCSLEEVIMAIKVRH 252
Query: 406 SGLGVETNVDLRKLMLAGDFINKHLGRP-SGSKTAIALNRIA 446
LGV TN++ +++ ++K P G+K + N A
Sbjct: 253 EMLGVHTNINHQEIYRTSQLVSKICNMPIPGNKAIVGSNAFA 294
>sp|A2SL35|HOA2_METPP 4-hydroxy-2-oxovalerate aldolase 2 OS=Methylibium petroleiphilum
(strain PM1) GN=Mpe_A3321 PE=3 SV=1
Length = 358
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 7/120 (5%)
Query: 302 PSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVV-PVEKLAVHLHDTYGQ 360
P +A K + D G + + D+ G P V + A+ AV+ P ++ H H G
Sbjct: 155 PEGLAKQGKLMEDYGAQTVYVTDSAGYMLPADVRARVAALRAVLKPETEIGFHGHHNLGM 214
Query: 361 SLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVETNVDLRKLM 420
+ N + +++ G S +D SVAGLG +GN E + + +G+ET VDL KLM
Sbjct: 215 GIANSIAAIEEGASRIDGSVAGLG------AGAGNTPLEVFLAVCDRMGIETGVDLFKLM 268
>sp|Q5E856|LEU1_VIBF1 2-isopropylmalate synthase OS=Vibrio fischeri (strain ATCC 700601 /
ES114) GN=leuA PE=3 SV=1
Length = 515
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 95/216 (43%), Gaps = 23/216 (10%)
Query: 234 EAAIAAGAKEVAIFASASEAFSKSNINCSIEDSL-VRYRAVAHAAKVLSIPVRGYVSCV- 291
EA A A + F S S + + S +D + + +AV HA R Y V
Sbjct: 86 EALKVAEAFRIHTFISTSTVHVQDKLRRSYDDVVEMGVKAVKHA--------RKYTDDVE 137
Query: 292 VGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVP-VEK- 349
C G P + + + D G I++ DT+G PG +++ + VP ++K
Sbjct: 138 FSCEDAGRTPIDNLCRMVEAAIDAGANTINIPDTVGYTVPGEFGGIVQTLFNRVPNIDKA 197
Query: 350 -LAVHLHDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSG- 407
++VH HD G S+ N + ++Q G V+ ++ G+G +GN + E++ +L
Sbjct: 198 IISVHCHDDLGMSVANSIAAVQAGARQVEGTINGIG------ERAGNCSLEEIAMILKTR 251
Query: 408 ---LGVETNVDLRKLMLAGDFINKHLGRPSGSKTAI 440
LGV TN+ ++ +++ P S AI
Sbjct: 252 SEYLGVHTNLKHDEIHRTSKLVSQLCNMPIQSNKAI 287
>sp|A8H9A1|LEU1_SHEPA 2-isopropylmalate synthase OS=Shewanella pealeana (strain ATCC
700345 / ANG-SQ1) GN=leuA PE=3 SV=1
Length = 523
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 75/154 (48%), Gaps = 13/154 (8%)
Query: 294 CPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVP-VEK--L 350
C G P + + +E G I++ DT+G P +++ + VP +++ +
Sbjct: 140 CEDAGRTPIDNLCRMVEEAIKAGARTINIPDTVGYTVPSEFGGIIQTLFNRVPNIDQAVI 199
Query: 351 AVHLHDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSG--- 407
+VH HD G S+ N + ++Q G ++C+V G+G +GN + E++ +LS
Sbjct: 200 SVHCHDDLGLSVANSITAVQHGARQIECTVNGIG------ERAGNCSLEEIAMILSTRKG 253
Query: 408 -LGVETNVDLRKLMLAGDFINKHLGRPSGSKTAI 440
LG+ET ++ +++ +++ P + AI
Sbjct: 254 ELGLETGINAKEIHRTSSLVSQLCNMPVQANKAI 287
>sp|Q9FN52|MAM3_ARATH Methylthioalkylmalate synthase 3, chloroplastic OS=Arabidopsis
thaliana GN=MAM3 PE=1 SV=1
Length = 503
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 128/343 (37%), Gaps = 57/343 (16%)
Query: 111 DIRDITNKFLKGIPR------FVKIVEVGPRDGLQNEKNTVPTGVKVELIRRL------- 157
D++ I + + IP +V++++ RDG Q+ + K+E+ R+L
Sbjct: 63 DLKPIMERRPEYIPNKLPHKNYVRVLDTTLRDGEQSPGAALTPPQKLEIARQLAKLRVDI 122
Query: 158 VSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQC 217
+ G PV F + K + A+ V V D E +PV+ +C
Sbjct: 123 MEVGFPVSSEEEFEAIKTI-----AKTVGNEV-DEETGYVPVICG-----------IARC 165
Query: 218 HASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAA 277
I + W EA A V +F S SE K + + E+ + A
Sbjct: 166 KKRDIEAT-W------EALKYAKRPRVMLFTSTSEIHMKYKLKKTKEEVIEMAVNSVKYA 218
Query: 278 KVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPM 337
K L G+ GC G + + E G + DT+G+ P +
Sbjct: 219 KSL-----GFKDIQFGCEDGGRTEKDFICKILGESIKAGATTVGFADTVGINMPQEFGEL 273
Query: 338 LEAVMAVVPVEK---LAVHLHDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASG 394
+ V+ P A+H H+ G + N + + G V+ ++ G+G SG
Sbjct: 274 VAYVIENTPGADDIVFAIHCHNDLGVATANTISGICAGARQVEVTINGIG------ERSG 327
Query: 395 NVATEDVVYMLSGL------GVETNVDLRKLMLAGDFINKHLG 431
N E+VV L GV T +D R++M + +H G
Sbjct: 328 NAPLEEVVMALKCRGESLMDGVYTKIDSRQIMATSKMVQEHTG 370
>sp|B0TQM0|LEU1_SHEHH 2-isopropylmalate synthase OS=Shewanella halifaxensis (strain
HAW-EB4) GN=leuA PE=3 SV=1
Length = 523
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 75/154 (48%), Gaps = 13/154 (8%)
Query: 294 CPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVP-VEK--L 350
C G P + + +E G I++ DT+G P +++ + VP +++ +
Sbjct: 140 CEDAGRTPIDNLCRMVEEAIKAGARTINIPDTVGYTVPSEFGGIIQTLFNRVPNIDQAVI 199
Query: 351 AVHLHDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSG--- 407
+VH HD G S+ N + ++Q G ++C+V G+G +GN + E++ +LS
Sbjct: 200 SVHCHDDLGLSVANSITAVQHGARQIECTVNGIG------ERAGNCSLEEIAMILSTRKG 253
Query: 408 -LGVETNVDLRKLMLAGDFINKHLGRPSGSKTAI 440
LG+ET ++ +++ +++ P + AI
Sbjct: 254 ELGLETGINAKEIHRTSSLVSQLCNMPVQANKAI 287
>sp|B8CM39|LEU1_SHEPW 2-isopropylmalate synthase OS=Shewanella piezotolerans (strain WP3
/ JCM 13877) GN=leuA PE=3 SV=1
Length = 523
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 75/154 (48%), Gaps = 13/154 (8%)
Query: 294 CPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVP-VEK--L 350
C G P + + +E G I++ DT+G P +++ + VP +++ +
Sbjct: 140 CEDAGRTPIDNLCRMVEEAIKAGARTINIPDTVGYTVPSEFGGIIQTLFNRVPNIDQAVI 199
Query: 351 AVHLHDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSG--- 407
+VH HD G S+ N + ++Q G ++C+V G+G +GN + E++ +LS
Sbjct: 200 SVHCHDDLGLSVANSITAVQHGARQIECTVNGIG------ERAGNCSLEEIAMILSTRKG 253
Query: 408 -LGVETNVDLRKLMLAGDFINKHLGRPSGSKTAI 440
LG+ET ++ +++ +++ P + AI
Sbjct: 254 ELGLETGINAKEIHRTSSLVSQLCNMPVQANKAI 287
>sp|Q2RHL3|HOA_MOOTA 4-hydroxy-2-oxovalerate aldolase OS=Moorella thermoacetica (strain
ATCC 39073) GN=Moth_1775 PE=3 SV=1
Length = 338
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 63/135 (46%), Gaps = 8/135 (5%)
Query: 301 PPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQ 360
PP KV AK G I++ D+ G P V + AV+ V V + H H+
Sbjct: 144 PPEKVVEQAKLFESYGADYINIADSAGAMLPEDVKARVGAVVEAVKV-PVGFHAHNNLTM 202
Query: 361 SLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVETNVDLRKLM 420
+ N L +++ G + +D + GLG +GN TE +V +L LG T VD K+M
Sbjct: 203 ATANALAAVEAGATFLDGACRGLGA------GAGNAQTEALVGVLDKLGYRTGVDFYKVM 256
Query: 421 -LAGDFINKHLGRPS 434
+A D + + RP
Sbjct: 257 DVAEDIVEPIMHRPQ 271
>sp|Q58595|LEU1_METJA 2-isopropylmalate synthase OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=leuA PE=1 SV=1
Length = 518
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 68/123 (55%), Gaps = 8/123 (6%)
Query: 308 VAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILI 367
V K+ D G I++ DT+GV P + ++ + + V ++VH H+ +G ++ N L
Sbjct: 169 VYKKAVDAGADIINVPDTVGVMIPRAMYYLINELKKEIKV-PISVHCHNDFGLAVANSLA 227
Query: 368 SLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVY-MLSGLGVETNVDLRKLMLAGDFI 426
+++ G V C++ GLG +G GN A E+VV ++S GV+TN+ +KL +
Sbjct: 228 AVEAGAEQVHCTINGLG----ERG--GNAALEEVVMSLMSIYGVKTNIKTQKLYEISQLV 281
Query: 427 NKH 429
+K+
Sbjct: 282 SKY 284
>sp|Q479E5|HOA5_DECAR 4-hydroxy-2-oxovalerate aldolase 5 OS=Dechloromonas aromatica
(strain RCB) GN=Daro_3808 PE=3 SV=1
Length = 354
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
Query: 302 PSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVV-PVEKLAVHLHDTYGQ 360
P +A K + G + + D+ G PG V + A+ V+ P ++ H H G
Sbjct: 150 PEGLAQQGKLMESYGAQTVYITDSAGYMLPGDVKARVSALRDVLKPETEIGFHGHHNMGM 209
Query: 361 SLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVETNVDLRKLM 420
+ N + +++ G S +D SV GLG +GN E V + +G+ET DL KLM
Sbjct: 210 GIANSIAAIEAGASRIDASVGGLG------AGAGNTPLEAFVAVCERMGIETGCDLFKLM 263
Query: 421 -LAGDFI 426
+A D I
Sbjct: 264 DMAEDII 270
>sp|B5FGH4|LEU1_VIBFM 2-isopropylmalate synthase OS=Vibrio fischeri (strain MJ11) GN=leuA
PE=3 SV=1
Length = 515
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 95/216 (43%), Gaps = 23/216 (10%)
Query: 234 EAAIAAGAKEVAIFASASEAFSKSNINCSIEDSL-VRYRAVAHAAKVLSIPVRGYVSCV- 291
EA A A + F S S + + S +D + + +AV HA R Y V
Sbjct: 86 EALKVAEAFRIHTFISTSTVHVQDKLRRSYDDVVEMGVKAVKHA--------RKYTDDVE 137
Query: 292 VGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVP-VEK- 349
C G P + + + + G I++ DT+G PG +++ + VP ++K
Sbjct: 138 FSCEDAGRTPIDNLCRMVEAAINAGANTINIPDTVGYTVPGEFGGIVQTLFNRVPNIDKA 197
Query: 350 -LAVHLHDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSG- 407
++VH HD G S+ N + ++Q G V+ ++ G+G +GN + E++ +L
Sbjct: 198 IISVHCHDDLGMSVANSIAAVQAGARQVEGTINGIG------ERAGNCSLEEIAMILKTR 251
Query: 408 ---LGVETNVDLRKLMLAGDFINKHLGRPSGSKTAI 440
LGV TN+ ++ +++ P S AI
Sbjct: 252 SEYLGVHTNLKHDEIHRTSKLVSQLCNMPIQSNKAI 287
>sp|Q0HZT4|LEU1_SHESR 2-isopropylmalate synthase OS=Shewanella sp. (strain MR-7) GN=leuA
PE=3 SV=1
Length = 522
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 75/154 (48%), Gaps = 13/154 (8%)
Query: 294 CPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVP-VEK--L 350
C G P + + + G I++ DT+G P +++ + VP +++ +
Sbjct: 140 CEDAGRTPIDNLCRMVEAAIHAGARTINIPDTVGYTVPSEFGGIIQTLFNRVPNIDQAII 199
Query: 351 AVHLHDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSG--- 407
+VH HD G S+ N + ++Q G ++C++ G+G +GN + E++ +L+
Sbjct: 200 SVHCHDDLGMSVANSITAVQHGARQIECTMNGIG------ERAGNCSLEEIAMILATRKN 253
Query: 408 -LGVETNVDLRKLMLAGDFINKHLGRPSGSKTAI 440
LGVET ++ +++ + +++ P S AI
Sbjct: 254 LLGVETGINAKEIHRTSNLVSQLCNMPIQSNKAI 287
>sp|Q0HE65|LEU1_SHESM 2-isopropylmalate synthase OS=Shewanella sp. (strain MR-4) GN=leuA
PE=3 SV=1
Length = 522
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 75/154 (48%), Gaps = 13/154 (8%)
Query: 294 CPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVP-VEK--L 350
C G P + + + G I++ DT+G P +++ + VP +++ +
Sbjct: 140 CEDAGRTPIDNLCRMVEAAIHAGARTINIPDTVGYTVPSEFGGIIQTLFNRVPNIDQAII 199
Query: 351 AVHLHDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSG--- 407
+VH HD G S+ N + ++Q G ++C++ G+G +GN + E++ +L+
Sbjct: 200 SVHCHDDLGMSVANSITAVQHGARQIECTMNGIG------ERAGNCSLEEIAMILATRKN 253
Query: 408 -LGVETNVDLRKLMLAGDFINKHLGRPSGSKTAI 440
LGVET ++ +++ + +++ P S AI
Sbjct: 254 LLGVETGINAKEIHRTSNLVSQLCNMPIQSNKAI 287
>sp|C4LAV7|LEU1_TOLAT 2-isopropylmalate synthase OS=Tolumonas auensis (strain DSM 9187 /
TA4) GN=leuA PE=3 SV=1
Length = 521
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 92/215 (42%), Gaps = 21/215 (9%)
Query: 234 EAAIAAGAKEVAIFASASEAFSKSNINCSIEDSL-VRYRAVAHAAKVLSIPVRGYVSCVV 292
EA A + F + S +S + S ED L + AV +A +
Sbjct: 86 EALKVADQFRIHTFLATSTIHVESKLKKSFEDVLEMGINAVKYARRFTD-------DVEF 138
Query: 293 GCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVP-VEK-- 349
C G P + + + + G I++ DT+G P ++ + VP ++K
Sbjct: 139 SCEDAGRTPIDNLCRMVEAAINAGARTINIPDTVGYTIPSEFGGIIHNLFNRVPNIDKAV 198
Query: 350 LAVHLHDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSG-- 407
++VH HD G S+ N + ++QMG V+C++ G+G +GN + E+V +L
Sbjct: 199 ISVHCHDDLGLSVANSISAVQMGARQVECTINGIG------ERAGNTSLEEVAMILRTRQ 252
Query: 408 --LGVETNVDLRKLMLAGDFINKHLGRPSGSKTAI 440
+GV TN+ +++ +++ P AI
Sbjct: 253 DLIGVHTNIKHQEIHRTSQLVSQLCNMPVQPNKAI 287
>sp|A0L1R0|LEU1_SHESA 2-isopropylmalate synthase OS=Shewanella sp. (strain ANA-3) GN=leuA
PE=3 SV=1
Length = 522
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 75/154 (48%), Gaps = 13/154 (8%)
Query: 294 CPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVP-VEK--L 350
C G P + + + G I++ DT+G P +++ + VP +++ +
Sbjct: 140 CEDAGRTPIDNLCRMVEAAIHAGARTINIPDTVGYTVPSEFGGIIQTLFNRVPNIDQAII 199
Query: 351 AVHLHDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSG--- 407
+VH HD G S+ N + ++Q G ++C++ G+G +GN + E++ +L+
Sbjct: 200 SVHCHDDLGMSVANSITAVQHGARQIECTMNGIG------ERAGNCSLEEIAMILATRKN 253
Query: 408 -LGVETNVDLRKLMLAGDFINKHLGRPSGSKTAI 440
LGVET ++ +++ + +++ P S AI
Sbjct: 254 LLGVETGINAKEIHRTSNLVSQLCNMPIQSNKAI 287
>sp|B8IHS8|LEU1_METNO 2-isopropylmalate synthase OS=Methylobacterium nodulans (strain
ORS2060 / LMG 21967) GN=leuA PE=3 SV=1
Length = 520
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 55/119 (46%), Gaps = 13/119 (10%)
Query: 315 MGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLA---VHLHDTYGQSLPNILISLQM 371
MG I+L DT+G TP M +V VP A VH H+ G ++ N L ++
Sbjct: 168 MGATTINLPDTVGYATPDEYRAMFRSVRERVPNADRAIFSVHCHNDLGLAIANSLAGIEG 227
Query: 372 GISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSG----LGVETNVDLRKLMLAGDFI 426
G V+C++ G+G +GN A E+VV L L T +D ++M A +
Sbjct: 228 GARQVECTINGIG------ERAGNAALEEVVMALRTRADVLPYTTGIDTTQIMRASKLV 280
>sp|Q9EVE3|LEU1_BUCUL 2-isopropylmalate synthase (Fragment) OS=Buchnera aphidicola subsp.
Uroleucon rurale GN=leuA PE=3 SV=1
Length = 437
Score = 52.0 bits (123), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 72/140 (51%), Gaps = 13/140 (9%)
Query: 308 VAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVP-VEK--LAVHLHDTYGQSLPN 364
+ ++L G I++ DT+G TP + +++ + VP + K ++VH HD G ++ N
Sbjct: 128 IVEKLIKSGVKTINIPDTVGYSTPDELTFIIKNLFERVPNIHKSIISVHCHDDLGMAVGN 187
Query: 365 ILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYML----SGLGVETNVDLRKLM 420
+ ++Q G ++ ++ G+G +GN A E+V+ + + LGV TN++ +++
Sbjct: 188 SIAAIQAGARQIEGTINGIG------ERAGNTALEEVIMAIKVRKNILGVSTNINHKEIY 241
Query: 421 LAGDFINKHLGRPSGSKTAI 440
I++ P S AI
Sbjct: 242 RTSQMISRICNMPIPSNKAI 261
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 163,147,524
Number of Sequences: 539616
Number of extensions: 6937861
Number of successful extensions: 18196
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 485
Number of HSP's that attempted gapping in prelim test: 17726
Number of HSP's gapped (non-prelim): 771
length of query: 452
length of database: 191,569,459
effective HSP length: 121
effective length of query: 331
effective length of database: 126,275,923
effective search space: 41797330513
effective search space used: 41797330513
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)