Query 012949
Match_columns 452
No_of_seqs 166 out of 1165
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 19:21:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012949.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012949hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ydo_A HMG-COA lyase; TIM-barr 100.0 1E-72 3.5E-77 566.6 28.5 300 123-448 3-302 (307)
2 2cw6_A Hydroxymethylglutaryl-C 100.0 3.1E-70 1.1E-74 545.9 33.3 297 122-444 1-297 (298)
3 2ftp_A Hydroxymethylglutaryl-C 100.0 3.7E-69 1.3E-73 539.2 33.2 295 122-442 4-298 (302)
4 3rmj_A 2-isopropylmalate synth 100.0 5.1E-67 1.8E-71 537.1 32.2 288 123-452 9-307 (370)
5 3eeg_A 2-isopropylmalate synth 100.0 2E-67 6.7E-72 532.0 22.3 289 122-452 2-301 (325)
6 1ydn_A Hydroxymethylglutaryl-C 100.0 3.5E-65 1.2E-69 508.1 32.6 289 123-437 1-289 (295)
7 3ble_A Citramalate synthase fr 100.0 1.8E-65 6.2E-70 520.0 29.6 295 120-452 13-313 (337)
8 3ivs_A Homocitrate synthase, m 100.0 1.2E-62 4E-67 511.0 26.8 286 123-452 36-325 (423)
9 2ztj_A Homocitrate synthase; ( 100.0 8.2E-61 2.8E-65 493.3 26.1 282 126-452 3-291 (382)
10 3ewb_X 2-isopropylmalate synth 100.0 4.4E-60 1.5E-64 472.1 28.0 273 125-439 4-287 (293)
11 3hq1_A 2-isopropylmalate synth 100.0 5.8E-60 2E-64 509.1 29.6 298 123-452 68-378 (644)
12 1rqb_A Transcarboxylase 5S sub 100.0 5.8E-54 2E-58 457.1 25.0 289 124-450 22-318 (539)
13 2nx9_A Oxaloacetate decarboxyl 100.0 1.2E-52 4.1E-57 441.1 26.8 290 122-450 3-298 (464)
14 1nvm_A HOA, 4-hydroxy-2-oxoval 100.0 6.4E-52 2.2E-56 421.7 29.0 276 123-451 5-289 (345)
15 3dxi_A Putative aldolase; TIM 100.0 2.6E-51 9.1E-56 413.0 20.9 272 126-451 2-277 (320)
16 3bg3_A Pyruvate carboxylase, m 100.0 6.8E-50 2.3E-54 438.5 29.9 309 109-450 78-406 (718)
17 2qf7_A Pyruvate carboxylase pr 100.0 1.4E-46 4.8E-51 432.4 22.9 291 124-449 548-850 (1165)
18 3hbl_A Pyruvate carboxylase; T 100.0 1.7E-45 5.8E-50 422.8 26.5 293 124-449 530-833 (1150)
19 2ekc_A AQ_1548, tryptophan syn 98.6 5.7E-07 1.9E-11 87.6 16.1 185 144-376 27-231 (262)
20 3t7v_A Methylornithine synthas 98.6 2.4E-06 8.2E-11 85.8 19.4 229 144-412 90-338 (350)
21 3nav_A Tryptophan synthase alp 98.2 1.2E-05 4.3E-10 78.8 13.9 184 144-376 30-234 (271)
22 3vnd_A TSA, tryptophan synthas 98.1 1.7E-05 5.8E-10 77.6 12.7 185 144-376 28-232 (267)
23 1qop_A Tryptophan synthase alp 98.1 3E-05 1E-09 75.5 13.6 181 144-376 27-231 (268)
24 3f4w_A Putative hexulose 6 pho 98.1 1.1E-05 3.9E-10 74.8 9.4 173 144-377 9-185 (211)
25 3iix_A Biotin synthetase, puta 98.1 0.0004 1.4E-08 69.0 20.9 231 144-415 83-337 (348)
26 1r30_A Biotin synthase; SAM ra 97.7 0.0076 2.6E-07 60.7 23.8 221 144-412 98-335 (369)
27 1rd5_A Tryptophan synthase alp 97.7 0.00036 1.2E-08 67.2 13.4 179 144-378 28-229 (262)
28 3tha_A Tryptophan synthase alp 97.6 0.00057 1.9E-08 66.3 12.6 186 144-376 24-224 (252)
29 3oa3_A Aldolase; structural ge 97.6 0.0079 2.7E-07 59.2 20.7 224 105-380 23-264 (288)
30 3txv_A Probable tagatose 6-pho 97.5 0.0044 1.5E-07 64.4 17.9 146 231-378 115-288 (450)
31 3r12_A Deoxyribose-phosphate a 97.2 0.022 7.5E-07 55.4 17.9 199 129-380 46-246 (260)
32 1w8s_A FBP aldolase, fructose- 97.0 0.012 4.1E-07 57.1 14.2 189 146-378 39-230 (263)
33 1eye_A DHPS 1, dihydropteroate 97.0 0.089 3E-06 51.6 20.6 201 127-379 9-255 (280)
34 3q94_A Fructose-bisphosphate a 96.9 0.034 1.1E-06 54.8 16.7 202 137-378 19-235 (288)
35 4e38_A Keto-hydroxyglutarate-a 96.9 0.0089 3E-07 57.2 12.2 154 145-374 43-197 (232)
36 3ngj_A Deoxyribose-phosphate a 96.9 0.094 3.2E-06 50.3 19.2 199 129-380 30-230 (239)
37 1n7k_A Deoxyribose-phosphate a 96.8 0.17 5.9E-06 48.3 21.0 195 127-380 21-222 (234)
38 3ovp_A Ribulose-phosphate 3-ep 96.8 0.0073 2.5E-07 57.4 11.2 169 146-377 15-195 (228)
39 3lab_A Putative KDPG (2-keto-3 96.8 0.013 4.6E-07 55.4 12.8 151 145-374 22-182 (217)
40 1wa3_A 2-keto-3-deoxy-6-phosph 96.8 0.077 2.6E-06 48.5 17.8 155 145-377 19-176 (205)
41 2y5s_A DHPS, dihydropteroate s 96.8 0.064 2.2E-06 53.0 18.1 201 124-378 23-271 (294)
42 1tx2_A DHPS, dihydropteroate s 96.8 0.037 1.3E-06 54.8 16.4 199 125-378 41-275 (297)
43 1rvg_A Fructose-1,6-bisphospha 96.8 0.017 5.7E-07 57.4 13.9 195 144-377 24-251 (305)
44 2isw_A Putative fructose-1,6-b 96.8 0.034 1.2E-06 55.6 16.2 195 144-377 25-253 (323)
45 1h1y_A D-ribulose-5-phosphate 96.8 0.018 6.1E-07 54.2 13.6 173 147-377 18-199 (228)
46 2dqw_A Dihydropteroate synthas 96.8 0.045 1.5E-06 54.1 16.7 206 125-378 30-269 (294)
47 1to3_A Putative aldolase YIHT; 96.7 0.068 2.3E-06 52.9 18.0 137 232-378 113-253 (304)
48 1tqj_A Ribulose-phosphate 3-ep 96.7 0.0038 1.3E-07 59.3 8.3 172 147-377 16-199 (230)
49 1geq_A Tryptophan synthase alp 96.7 0.18 6E-06 47.5 19.6 180 144-377 15-218 (248)
50 1qtw_A Endonuclease IV; DNA re 96.6 0.19 6.6E-06 47.3 19.8 172 231-431 93-280 (285)
51 2q02_A Putative cytoplasmic pr 96.6 0.087 3E-06 49.4 17.1 214 151-411 22-239 (272)
52 1p1x_A Deoxyribose-phosphate a 96.6 0.083 2.8E-06 51.3 17.1 210 129-385 15-238 (260)
53 1ub3_A Aldolase protein; schif 96.6 0.078 2.7E-06 50.1 16.5 190 144-380 15-206 (220)
54 2vp8_A Dihydropteroate synthas 96.6 0.039 1.3E-06 55.1 14.9 165 125-343 43-238 (318)
55 3kws_A Putative sugar isomeras 96.6 0.34 1.2E-05 45.9 21.2 245 123-430 24-284 (287)
56 3ngf_A AP endonuclease, family 96.5 0.19 6.4E-06 47.5 18.7 209 150-411 25-241 (269)
57 2yw3_A 4-hydroxy-2-oxoglutarat 96.5 0.02 6.8E-07 53.5 11.6 153 147-376 24-176 (207)
58 3aam_A Endonuclease IV, endoiv 96.5 0.055 1.9E-06 51.1 14.8 214 149-410 15-240 (270)
59 3tr9_A Dihydropteroate synthas 96.5 0.12 4.1E-06 51.5 17.5 204 124-378 28-273 (314)
60 3ndo_A Deoxyribose-phosphate a 96.5 0.079 2.7E-06 50.6 15.6 198 129-380 16-220 (231)
61 1gvf_A Tagatose-bisphosphate a 96.5 0.075 2.6E-06 52.3 15.8 193 144-377 25-230 (286)
62 3k13_A 5-methyltetrahydrofolat 96.4 0.33 1.1E-05 48.0 20.0 235 129-430 18-298 (300)
63 3qxb_A Putative xylose isomera 96.4 0.058 2E-06 52.4 14.5 227 152-411 39-279 (316)
64 3aal_A Probable endonuclease 4 96.3 0.28 9.4E-06 47.2 19.1 224 150-410 20-255 (303)
65 3ctl_A D-allulose-6-phosphate 96.3 0.012 4E-07 56.2 9.0 167 151-377 16-193 (231)
66 3ajx_A 3-hexulose-6-phosphate 96.3 0.11 3.6E-06 47.6 15.3 167 145-377 10-184 (207)
67 1aj0_A DHPS, dihydropteroate s 96.3 0.21 7.2E-06 48.9 18.0 168 125-343 16-206 (282)
68 1f6y_A 5-methyltetrahydrofolat 96.3 0.15 5E-06 49.5 16.7 173 134-360 15-204 (262)
69 1rpx_A Protein (ribulose-phosp 96.3 0.03 1E-06 52.4 11.6 173 148-379 23-207 (230)
70 3n9r_A Fructose-bisphosphate a 96.3 0.029 1E-06 55.7 11.9 203 137-378 15-254 (307)
71 3inp_A D-ribulose-phosphate 3- 96.2 0.0048 1.7E-07 59.5 5.8 170 146-377 38-221 (246)
72 4h3d_A 3-dehydroquinate dehydr 96.2 0.31 1.1E-05 47.0 18.6 241 121-408 2-253 (258)
73 2h9a_B CO dehydrogenase/acetyl 96.2 0.026 8.9E-07 56.2 11.2 152 122-327 45-211 (310)
74 2qjg_A Putative aldolase MJ040 96.2 0.21 7.3E-06 47.7 17.2 129 231-378 103-236 (273)
75 2qul_A D-tagatose 3-epimerase; 96.1 0.31 1.1E-05 46.0 17.6 214 151-411 20-240 (290)
76 3lye_A Oxaloacetate acetyl hyd 96.1 0.27 9.3E-06 48.8 17.5 218 153-409 37-269 (307)
77 1vcv_A Probable deoxyribose-ph 96.0 0.74 2.5E-05 43.6 19.7 189 144-379 13-220 (226)
78 3jr2_A Hexulose-6-phosphate sy 96.0 0.037 1.3E-06 51.6 10.3 171 144-377 15-192 (218)
79 3noy_A 4-hydroxy-3-methylbut-2 95.9 1.7 5.8E-05 43.9 25.9 232 144-445 42-311 (366)
80 3q58_A N-acetylmannosamine-6-p 95.9 0.22 7.6E-06 47.1 15.6 169 145-378 33-209 (229)
81 3o1n_A 3-dehydroquinate dehydr 95.9 1.4 4.9E-05 42.8 22.7 235 125-407 26-272 (276)
82 1mxs_A KDPG aldolase; 2-keto-3 95.9 0.17 5.8E-06 47.9 14.5 153 146-377 36-193 (225)
83 3fa4_A 2,3-dimethylmalate lyas 95.9 0.22 7.4E-06 49.4 15.7 219 153-409 30-261 (302)
84 2wqp_A Polysialic acid capsule 95.8 0.21 7.3E-06 50.4 15.7 183 145-380 32-237 (349)
85 3vni_A Xylose isomerase domain 95.8 0.1 3.5E-06 49.7 12.8 211 150-411 19-239 (294)
86 3igs_A N-acetylmannosamine-6-p 95.8 0.31 1.1E-05 46.2 16.0 169 145-378 33-209 (232)
87 1vhc_A Putative KHG/KDPG aldol 95.8 0.16 5.4E-06 48.0 13.8 154 145-377 26-184 (224)
88 1h5y_A HISF; histidine biosynt 95.7 0.27 9.4E-06 45.5 15.4 208 148-412 33-251 (253)
89 3eol_A Isocitrate lyase; seatt 95.6 0.11 3.6E-06 53.9 12.8 199 232-446 165-402 (433)
90 2yci_X 5-methyltetrahydrofolat 95.6 0.1 3.5E-06 50.9 11.9 178 128-360 15-213 (271)
91 3cqj_A L-ribulose-5-phosphate 95.5 0.17 5.8E-06 48.3 13.4 232 123-411 15-256 (295)
92 1k77_A EC1530, hypothetical pr 95.5 0.2 6.8E-06 46.6 13.5 208 152-411 19-234 (260)
93 2a4a_A Deoxyribose-phosphate a 95.5 0.2 6.9E-06 49.1 13.8 209 129-385 35-265 (281)
94 3glc_A Aldolase LSRF; TIM barr 95.4 0.35 1.2E-05 47.7 15.3 125 232-378 130-256 (295)
95 4eiv_A Deoxyribose-phosphate a 95.4 0.61 2.1E-05 45.9 16.7 213 129-385 29-271 (297)
96 1f8m_A Isocitrate lyase, ICL; 95.4 0.18 6E-06 52.3 13.5 199 232-447 168-404 (429)
97 3pm6_A Putative fructose-bisph 95.4 0.2 7E-06 49.6 13.4 199 135-377 23-249 (306)
98 2qgq_A Protein TM_1862; alpha- 95.3 0.58 2E-05 45.6 16.6 148 144-322 32-190 (304)
99 3cu2_A Ribulose-5-phosphate 3- 95.2 0.14 4.7E-06 49.0 11.4 169 149-376 27-214 (237)
100 3i4e_A Isocitrate lyase; struc 95.2 0.26 8.9E-06 51.1 14.1 199 232-446 172-407 (439)
101 1mzh_A Deoxyribose-phosphate a 95.2 1.5 5.3E-05 41.0 18.6 183 144-376 16-201 (225)
102 1zlp_A PSR132, petal death pro 95.2 0.46 1.6E-05 47.3 15.5 216 154-409 52-279 (318)
103 1wbh_A KHG/KDPG aldolase; lyas 95.2 0.35 1.2E-05 45.3 13.8 154 145-377 25-183 (214)
104 2v82_A 2-dehydro-3-deoxy-6-pho 95.1 1 3.5E-05 41.2 16.8 159 145-378 16-175 (212)
105 1vli_A Spore coat polysacchari 95.1 0.45 1.5E-05 48.6 15.4 122 231-380 125-249 (385)
106 2ze3_A DFA0005; organic waste 95.1 0.22 7.5E-06 48.6 12.6 213 154-409 29-254 (275)
107 1tv8_A MOAA, molybdenum cofact 95.1 1.5 5.1E-05 43.0 19.0 137 144-318 49-190 (340)
108 1xg4_A Probable methylisocitra 95.1 0.19 6.4E-06 49.6 12.2 218 154-409 30-257 (295)
109 3qc0_A Sugar isomerase; TIM ba 95.0 0.079 2.7E-06 49.7 9.1 214 151-411 21-242 (275)
110 3elf_A Fructose-bisphosphate a 95.0 0.28 9.5E-06 49.5 13.4 221 136-378 18-275 (349)
111 3eoo_A Methylisocitrate lyase; 95.0 0.31 1.1E-05 48.1 13.5 217 154-409 35-261 (298)
112 1i60_A IOLI protein; beta barr 95.0 1.3 4.5E-05 41.1 17.4 213 151-411 17-240 (278)
113 3tva_A Xylose isomerase domain 94.9 0.32 1.1E-05 46.1 13.2 145 231-411 106-253 (290)
114 3m5v_A DHDPS, dihydrodipicolin 94.9 3 0.0001 40.7 20.5 197 144-406 24-226 (301)
115 3gr7_A NADPH dehydrogenase; fl 94.9 0.69 2.4E-05 46.2 15.9 140 232-377 149-305 (340)
116 3obe_A Sugar phosphate isomera 94.8 1.8 6.3E-05 41.7 18.6 121 150-285 38-167 (305)
117 3ih1_A Methylisocitrate lyase; 94.7 0.5 1.7E-05 46.8 14.1 213 153-409 41-265 (305)
118 3g8r_A Probable spore coat pol 94.7 0.98 3.4E-05 45.5 16.3 118 232-378 103-224 (350)
119 2vef_A Dihydropteroate synthas 94.6 1.5 5E-05 43.5 17.3 207 124-379 10-284 (314)
120 2fli_A Ribulose-phosphate 3-ep 94.6 0.37 1.3E-05 44.3 12.2 174 146-379 14-198 (220)
121 2zvr_A Uncharacterized protein 94.5 3.2 0.00011 39.2 19.3 215 147-411 40-257 (290)
122 3lg3_A Isocitrate lyase; conse 94.5 0.29 1E-05 50.6 12.4 199 232-446 172-409 (435)
123 2v9d_A YAGE; dihydrodipicolini 94.5 4.1 0.00014 40.7 20.7 185 144-384 48-241 (343)
124 1s2w_A Phosphoenolpyruvate pho 94.5 0.24 8.2E-06 48.8 11.3 218 154-409 32-260 (295)
125 2hk0_A D-psicose 3-epimerase; 94.5 0.66 2.3E-05 44.6 14.3 142 231-411 111-258 (309)
126 1olt_A Oxygen-independent copr 94.4 0.29 1E-05 50.6 12.3 84 231-322 154-239 (457)
127 1z41_A YQJM, probable NADH-dep 94.4 0.89 3E-05 45.2 15.3 141 231-378 148-306 (338)
128 3hgj_A Chromate reductase; TIM 94.2 0.95 3.2E-05 45.3 15.1 140 231-377 156-316 (349)
129 3nvt_A 3-deoxy-D-arabino-heptu 94.2 0.7 2.4E-05 47.2 14.3 179 146-378 154-347 (385)
130 1sfl_A 3-dehydroquinate dehydr 94.2 3.9 0.00013 38.7 20.8 212 147-406 16-236 (238)
131 3qja_A IGPS, indole-3-glycerol 94.1 1.2 4.2E-05 43.1 15.3 165 149-376 73-239 (272)
132 1dos_A Aldolase class II; lyas 94.1 1 3.6E-05 45.5 15.1 125 239-377 136-286 (358)
133 1jub_A Dihydroorotate dehydrog 94.0 1.2 4E-05 43.4 15.1 133 231-379 110-271 (311)
134 2yr1_A 3-dehydroquinate dehydr 94.0 4.4 0.00015 38.8 18.9 234 126-408 7-252 (257)
135 3l23_A Sugar phosphate isomera 94.0 2.6 8.8E-05 40.6 17.5 142 125-285 13-163 (303)
136 3l5l_A Xenobiotic reductase A; 94.0 0.54 1.8E-05 47.4 12.8 141 231-377 162-323 (363)
137 3oa3_A Aldolase; structural ge 93.9 1.8 6.1E-05 42.5 16.0 141 232-406 79-226 (288)
138 1y0e_A Putative N-acetylmannos 93.9 2.5 8.6E-05 38.7 16.4 174 146-378 21-203 (223)
139 1vzw_A Phosphoribosyl isomeras 93.9 1.1 3.8E-05 41.8 14.2 175 149-377 33-220 (244)
140 3u0h_A Xylose isomerase domain 93.9 0.57 1.9E-05 43.8 12.2 219 151-411 19-244 (281)
141 1qwg_A PSL synthase;, (2R)-pho 93.9 0.27 9.3E-06 47.3 9.8 155 231-409 29-198 (251)
142 1tqx_A D-ribulose-5-phosphate 93.9 0.36 1.2E-05 45.7 10.6 167 148-377 18-199 (227)
143 1zco_A 2-dehydro-3-deoxyphosph 93.8 1.9 6.5E-05 41.6 15.9 181 145-380 34-230 (262)
144 3eb2_A Putative dihydrodipicol 93.8 5.2 0.00018 39.0 19.3 192 144-406 21-222 (300)
145 3lmz_A Putative sugar isomeras 93.8 2.9 9.8E-05 38.8 16.9 209 150-430 32-254 (257)
146 3rys_A Adenosine deaminase 1; 93.8 2.3 8E-05 42.5 17.0 134 231-377 85-222 (343)
147 1ujp_A Tryptophan synthase alp 93.7 0.25 8.6E-06 48.0 9.6 178 145-376 27-226 (271)
148 1ka9_F Imidazole glycerol phos 93.7 2.3 7.9E-05 39.7 16.0 95 305-414 154-251 (252)
149 3daq_A DHDPS, dihydrodipicolin 93.7 5.5 0.00019 38.7 19.1 196 144-407 19-222 (292)
150 2qw5_A Xylose isomerase-like T 93.6 1.2 4.1E-05 43.3 14.4 143 231-411 113-275 (335)
151 2gou_A Oxidoreductase, FMN-bin 93.6 0.88 3E-05 45.9 13.8 139 232-378 166-321 (365)
152 2ekc_A AQ_1548, tryptophan syn 93.5 1.6 5.5E-05 41.8 14.9 101 271-378 5-128 (262)
153 2tps_A Protein (thiamin phosph 93.4 0.59 2E-05 43.0 11.2 157 150-379 33-200 (227)
154 3iwp_A Copper homeostasis prot 93.4 1.5 5.2E-05 43.0 14.4 188 154-382 52-241 (287)
155 3ngj_A Deoxyribose-phosphate a 93.4 1.9 6.5E-05 41.2 14.8 141 232-406 48-195 (239)
156 2x7v_A Probable endonuclease 4 93.2 4.7 0.00016 37.6 17.4 166 231-429 93-278 (287)
157 3qm3_A Fructose-bisphosphate a 93.2 0.69 2.4E-05 46.8 12.0 134 233-378 128-286 (357)
158 3b0p_A TRNA-dihydrouridine syn 93.2 1.7 5.8E-05 43.4 14.9 137 232-379 75-225 (350)
159 3si9_A DHDPS, dihydrodipicolin 93.2 7.1 0.00024 38.4 21.3 193 144-406 39-241 (315)
160 1o66_A 3-methyl-2-oxobutanoate 93.2 3 0.0001 40.6 16.1 156 151-347 27-197 (275)
161 4djd_D C/Fe-SP, corrinoid/iron 93.1 0.74 2.5E-05 45.9 11.9 147 149-343 81-236 (323)
162 2qiw_A PEP phosphonomutase; st 93.1 1.2 4.2E-05 42.8 13.1 193 152-378 31-235 (255)
163 1vyr_A Pentaerythritol tetrani 93.1 1.1 3.6E-05 45.3 13.3 143 232-379 166-323 (364)
164 3p6l_A Sugar phosphate isomera 93.0 1.1 3.8E-05 41.7 12.7 226 126-430 11-258 (262)
165 3r2g_A Inosine 5'-monophosphat 93.0 0.34 1.2E-05 49.1 9.5 72 303-381 99-171 (361)
166 4hb7_A Dihydropteroate synthas 93.0 2.1 7E-05 41.7 14.6 170 127-343 10-191 (270)
167 1twd_A Copper homeostasis prot 92.9 2 6.7E-05 41.5 14.1 183 154-379 14-198 (256)
168 3r12_A Deoxyribose-phosphate a 92.8 1 3.4E-05 43.7 12.0 142 232-407 64-212 (260)
169 3iv3_A Tagatose 1,6-diphosphat 92.8 4.4 0.00015 40.5 17.1 135 232-374 115-273 (332)
170 3s5o_A 4-hydroxy-2-oxoglutarat 92.8 4.6 0.00016 39.5 17.2 196 144-406 31-235 (307)
171 1yxy_A Putative N-acetylmannos 92.8 1.7 5.7E-05 40.3 13.3 169 149-377 37-213 (234)
172 1rd5_A Tryptophan synthase alp 92.7 3 0.0001 39.5 15.3 95 272-379 7-125 (262)
173 1q7z_A 5-methyltetrahydrofolat 92.7 2.5 8.5E-05 45.2 16.1 169 232-427 191-402 (566)
174 1thf_D HISF protein; thermophI 92.7 2.9 9.8E-05 39.0 15.0 208 148-412 30-248 (253)
175 3vav_A 3-methyl-2-oxobutanoate 92.6 5.3 0.00018 38.9 16.9 159 151-352 39-214 (275)
176 1ep3_A Dihydroorotate dehydrog 92.6 1.2 4E-05 43.1 12.4 95 275-380 90-197 (311)
177 2a4a_A Deoxyribose-phosphate a 92.5 1.7 5.8E-05 42.5 13.3 109 288-406 92-210 (281)
178 2r14_A Morphinone reductase; H 92.5 0.97 3.3E-05 45.8 12.1 142 232-378 171-327 (377)
179 1q7z_A 5-methyltetrahydrofolat 92.5 0.93 3.2E-05 48.5 12.5 152 134-342 330-493 (566)
180 3fok_A Uncharacterized protein 92.5 1.1 3.7E-05 44.4 11.9 127 232-378 133-272 (307)
181 3flu_A DHDPS, dihydrodipicolin 92.4 8.4 0.00029 37.4 22.8 192 144-406 24-225 (297)
182 3gka_A N-ethylmaleimide reduct 92.3 2 6.7E-05 43.4 14.1 136 231-377 165-314 (361)
183 3mcm_A 2-amino-4-hydroxy-6-hyd 92.3 1.2 4.2E-05 46.2 12.7 168 124-341 191-385 (442)
184 3qze_A DHDPS, dihydrodipicolin 92.3 9.3 0.00032 37.5 21.3 192 144-406 40-241 (314)
185 3pao_A Adenosine deaminase; st 92.1 2.2 7.4E-05 42.4 13.9 134 231-377 82-219 (326)
186 1m3u_A 3-methyl-2-oxobutanoate 92.1 2.6 8.8E-05 40.8 14.0 155 151-347 27-197 (264)
187 1bxb_A Xylose isomerase; xylos 92.1 1.6 5.5E-05 43.8 13.2 124 230-359 119-250 (387)
188 2bdq_A Copper homeostasis prot 92.0 1.7 5.9E-05 41.1 12.2 182 158-379 18-207 (224)
189 3iar_A Adenosine deaminase; pu 91.8 5.9 0.0002 39.9 16.9 137 230-378 81-235 (367)
190 2y88_A Phosphoribosyl isomeras 91.7 2 7E-05 39.8 12.6 175 149-376 32-222 (244)
191 2ehh_A DHDPS, dihydrodipicolin 91.7 10 0.00035 36.7 20.2 179 144-375 17-201 (294)
192 3kru_A NADH:flavin oxidoreduct 91.6 2.6 9E-05 42.1 14.0 139 232-377 148-305 (343)
193 3sz8_A 2-dehydro-3-deoxyphosph 91.6 4.8 0.00016 39.4 15.4 184 146-381 32-245 (285)
194 4eiv_A Deoxyribose-phosphate a 91.6 0.77 2.6E-05 45.2 9.6 110 288-407 86-205 (297)
195 4ab4_A Xenobiotic reductase B; 91.6 2.8 9.7E-05 42.2 14.2 134 231-377 157-306 (362)
196 2e6f_A Dihydroorotate dehydrog 91.6 2.4 8.3E-05 41.2 13.4 131 232-378 111-272 (314)
197 2h9a_A Carbon monoxide dehydro 91.5 0.94 3.2E-05 47.1 10.8 171 145-378 102-292 (445)
198 1u83_A Phosphosulfolactate syn 91.5 0.3 1E-05 47.6 6.5 145 231-401 56-213 (276)
199 1o5k_A DHDPS, dihydrodipicolin 91.5 11 0.00038 36.8 20.4 180 144-376 29-217 (306)
200 1vyr_A Pentaerythritol tetrani 91.5 2.1 7E-05 43.1 13.1 121 262-383 75-275 (364)
201 2w6r_A Imidazole glycerol phos 91.4 3.5 0.00012 38.8 14.0 207 149-410 31-251 (266)
202 3ih1_A Methylisocitrate lyase; 91.2 2.8 9.5E-05 41.4 13.4 132 233-376 42-192 (305)
203 1xi3_A Thiamine phosphate pyro 91.2 2 6.8E-05 38.9 11.7 155 149-379 27-190 (215)
204 3l21_A DHDPS, dihydrodipicolin 91.1 0.93 3.2E-05 44.5 9.9 82 298-379 31-117 (304)
205 3ktc_A Xylose isomerase; putat 91.1 3.2 0.00011 40.3 13.8 219 151-411 36-265 (333)
206 3n9r_A Fructose-bisphosphate a 91.0 0.68 2.3E-05 45.9 8.7 116 270-406 5-125 (307)
207 1vr6_A Phospho-2-dehydro-3-deo 91.0 3.3 0.00011 41.7 13.9 182 146-381 118-314 (350)
208 3b8i_A PA4872 oxaloacetate dec 90.9 3.5 0.00012 40.4 13.7 197 153-383 33-238 (287)
209 2bmb_A Folic acid synthesis pr 90.9 16 0.00054 38.9 19.6 168 125-343 226-457 (545)
210 3lgd_A Adenosine deaminase CEC 90.7 1.7 5.7E-05 46.0 11.9 143 231-380 204-360 (508)
211 1ur4_A Galactanase; hydrolase, 90.7 16 0.00055 37.2 19.8 149 232-383 53-236 (399)
212 2z6i_A Trans-2-enoyl-ACP reduc 90.7 4.6 0.00016 39.8 14.6 110 231-379 79-191 (332)
213 1vrd_A Inosine-5'-monophosphat 90.5 0.94 3.2E-05 47.2 9.8 73 304-382 237-309 (494)
214 3ayv_A Putative uncharacterize 90.5 1.2 4.1E-05 41.3 9.7 186 145-359 7-193 (254)
215 2pgf_A Adenosine deaminase; me 90.5 6.4 0.00022 39.4 15.6 135 230-376 118-259 (371)
216 1vs1_A 3-deoxy-7-phosphoheptul 90.4 4.9 0.00017 39.0 14.2 181 146-380 50-245 (276)
217 1oy0_A Ketopantoate hydroxymet 90.4 3.3 0.00011 40.4 13.0 157 151-347 44-215 (281)
218 3tak_A DHDPS, dihydrodipicolin 90.4 2.3 7.7E-05 41.4 11.8 82 298-379 17-103 (291)
219 1ydn_A Hydroxymethylglutaryl-C 90.3 0.97 3.3E-05 43.9 9.1 12 273-284 31-42 (295)
220 2hjp_A Phosphonopyruvate hydro 90.2 2.8 9.6E-05 41.0 12.3 220 153-409 27-257 (290)
221 1icp_A OPR1, 12-oxophytodienoa 90.2 4.3 0.00015 41.0 14.1 120 261-381 84-278 (376)
222 2a5h_A L-lysine 2,3-aminomutas 90.2 15 0.00051 37.4 18.3 167 144-347 144-321 (416)
223 2r14_A Morphinone reductase; H 90.1 5.3 0.00018 40.4 14.7 119 262-381 79-277 (377)
224 4fo4_A Inosine 5'-monophosphat 90.1 1.5 5E-05 44.5 10.4 69 305-379 109-177 (366)
225 3gr7_A NADPH dehydrogenase; fl 90.0 3.7 0.00013 40.8 13.3 119 264-384 79-254 (340)
226 2c6q_A GMP reductase 2; TIM ba 90.0 1.1 3.8E-05 45.0 9.5 70 307-382 121-192 (351)
227 3ndo_A Deoxyribose-phosphate a 90.0 8.5 0.00029 36.4 15.1 142 232-407 34-186 (231)
228 2ze3_A DFA0005; organic waste 90.0 2.5 8.4E-05 41.1 11.6 135 233-376 29-185 (275)
229 3r2g_A Inosine 5'-monophosphat 89.9 16 0.00055 36.8 17.9 173 149-387 54-238 (361)
230 3dz1_A Dihydrodipicolinate syn 89.9 1.5 5.2E-05 43.2 10.2 81 298-378 24-108 (313)
231 3flu_A DHDPS, dihydrodipicolin 89.9 1.4 4.9E-05 43.0 10.0 82 298-379 23-109 (297)
232 3dx5_A Uncharacterized protein 89.8 1.5 5E-05 41.3 9.8 243 151-430 18-274 (286)
233 1z41_A YQJM, probable NADH-dep 89.8 3.3 0.00011 41.0 12.7 118 263-382 78-252 (338)
234 2hsa_B 12-oxophytodienoate red 89.8 7.4 0.00025 39.6 15.6 143 231-378 175-347 (402)
235 1xim_A D-xylose isomerase; iso 89.8 1.9 6.5E-05 43.4 11.1 123 230-359 119-250 (393)
236 1p1x_A Deoxyribose-phosphate a 89.8 3.7 0.00013 39.6 12.6 135 288-432 71-226 (260)
237 3vnd_A TSA, tryptophan synthas 89.7 4.4 0.00015 39.2 13.1 149 231-407 36-203 (267)
238 1ps9_A 2,4-dienoyl-COA reducta 89.7 5.2 0.00018 43.0 15.2 142 231-379 145-310 (671)
239 3nav_A Tryptophan synthase alp 89.7 5.5 0.00019 38.6 13.8 104 269-379 6-132 (271)
240 4gxw_A Adenosine deaminase; am 89.7 15 0.00051 37.1 17.6 141 230-381 99-244 (380)
241 2vp8_A Dihydropteroate synthas 89.6 1 3.6E-05 44.8 8.8 79 296-379 57-144 (318)
242 2isw_A Putative fructose-1,6-b 89.6 1.7 5.9E-05 43.3 10.3 117 270-407 6-127 (323)
243 3p6l_A Sugar phosphate isomera 89.3 10 0.00036 34.9 15.2 124 231-372 26-155 (262)
244 3qfe_A Putative dihydrodipicol 89.3 1.1 3.9E-05 44.2 8.8 81 298-378 27-112 (318)
245 3fkr_A L-2-keto-3-deoxyarabona 89.2 1.3 4.6E-05 43.5 9.2 82 298-379 24-110 (309)
246 2gou_A Oxidoreductase, FMN-bin 89.2 7 0.00024 39.2 14.7 120 262-382 75-273 (365)
247 1wv2_A Thiazole moeity, thiazo 89.1 1.2 4.2E-05 43.1 8.5 195 152-406 34-237 (265)
248 3b4u_A Dihydrodipicolinate syn 89.1 5.1 0.00017 38.9 13.2 107 231-352 28-138 (294)
249 3bo9_A Putative nitroalkan dio 89.0 14 0.00047 36.3 16.5 110 231-379 93-205 (326)
250 3iwp_A Copper homeostasis prot 89.0 8 0.00027 37.8 14.4 168 230-424 49-228 (287)
251 2qiw_A PEP phosphonomutase; st 89.0 1.9 6.6E-05 41.4 9.9 134 233-378 33-187 (255)
252 1xm3_A Thiazole biosynthesis p 89.0 1 3.5E-05 43.3 8.0 171 154-377 29-205 (264)
253 1yxy_A Putative N-acetylmannos 88.9 1.3 4.5E-05 41.1 8.5 72 307-384 92-165 (234)
254 3cny_A Inositol catabolism pro 88.8 4.1 0.00014 38.3 12.1 220 144-411 30-267 (301)
255 3qfe_A Putative dihydrodipicol 88.7 19 0.00066 35.3 20.4 176 144-374 28-215 (318)
256 1ypf_A GMP reductase; GUAC, pu 88.7 3.5 0.00012 40.8 12.0 93 272-381 85-179 (336)
257 3b8i_A PA4872 oxaloacetate dec 88.7 4.3 0.00015 39.7 12.3 135 232-376 33-185 (287)
258 3aty_A Tcoye, prostaglandin F2 88.6 5.3 0.00018 40.4 13.4 139 231-378 178-335 (379)
259 1viz_A PCRB protein homolog; s 88.6 5.8 0.0002 37.7 12.8 168 151-376 23-207 (240)
260 3q94_A Fructose-bisphosphate a 88.5 1.8 6.3E-05 42.4 9.5 102 271-385 10-118 (288)
261 3daq_A DHDPS, dihydrodipicolin 88.4 3.7 0.00013 39.9 11.7 82 299-380 19-105 (292)
262 3bdk_A D-mannonate dehydratase 88.4 23 0.00079 35.8 18.5 19 393-411 306-324 (386)
263 2wkj_A N-acetylneuraminate lya 88.4 7.3 0.00025 38.0 13.9 107 231-352 36-143 (303)
264 1nvm_A HOA, 4-hydroxy-2-oxoval 88.3 4.1 0.00014 40.5 12.2 24 244-267 9-33 (345)
265 2f6u_A GGGPS, (S)-3-O-geranylg 88.3 9.2 0.00032 36.2 14.0 171 151-376 23-215 (234)
266 3dz1_A Dihydrodipicolinate syn 88.3 5.6 0.00019 39.0 13.0 99 232-346 34-132 (313)
267 4fxs_A Inosine-5'-monophosphat 88.2 1.8 6.3E-05 45.4 9.9 70 306-381 233-302 (496)
268 1icp_A OPR1, 12-oxophytodienoa 88.2 3.7 0.00013 41.5 11.9 143 231-378 171-329 (376)
269 3lmz_A Putative sugar isomeras 88.2 7.2 0.00025 36.0 13.2 102 231-356 34-135 (257)
270 3q58_A N-acetylmannosamine-6-p 88.2 1.2 4E-05 42.1 7.7 69 308-384 93-161 (229)
271 3s5o_A 4-hydroxy-2-oxoglutarat 88.2 2.1 7.2E-05 42.0 9.8 82 298-379 30-116 (307)
272 3m5v_A DHDPS, dihydrodipicolin 88.1 9.7 0.00033 37.1 14.6 122 231-367 32-159 (301)
273 3l23_A Sugar phosphate isomera 88.1 5 0.00017 38.5 12.4 114 231-356 33-168 (303)
274 1y0e_A Putative N-acetylmannos 88.1 4.1 0.00014 37.2 11.3 71 308-384 80-151 (223)
275 4fxs_A Inosine-5'-monophosphat 88.0 3.1 0.00011 43.6 11.5 130 149-324 231-364 (496)
276 1xg4_A Probable methylisocitra 87.9 4.1 0.00014 40.0 11.6 135 233-376 30-184 (295)
277 3inp_A D-ribulose-phosphate 3- 87.9 0.86 3E-05 43.7 6.6 79 300-380 37-117 (246)
278 4dpp_A DHDPS 2, dihydrodipicol 87.9 2.3 7.7E-05 43.0 10.0 101 297-407 74-179 (360)
279 1tx2_A DHPS, dihydropteroate s 87.9 2.2 7.4E-05 42.0 9.6 73 301-379 61-142 (297)
280 1ceo_A Cellulase CELC; glycosy 87.8 3.3 0.00011 40.3 11.0 62 229-290 30-91 (343)
281 2fiq_A Putative tagatose 6-pho 87.8 0.96 3.3E-05 46.7 7.2 147 231-381 108-284 (420)
282 3si9_A DHDPS, dihydrodipicolin 87.7 2 7E-05 42.4 9.4 82 298-379 38-124 (315)
283 1gvf_A Tagatose-bisphosphate a 87.7 2.6 9E-05 41.2 10.0 115 271-407 7-126 (286)
284 3na8_A Putative dihydrodipicol 87.6 4.7 0.00016 39.7 12.0 82 298-379 40-126 (315)
285 2wkj_A N-acetylneuraminate lya 87.5 5.8 0.0002 38.7 12.5 83 298-380 27-114 (303)
286 1qop_A Tryptophan synthase alp 87.5 14 0.00048 35.1 15.0 102 271-379 5-129 (268)
287 1vcv_A Probable deoxyribose-ph 87.4 9.1 0.00031 36.1 13.3 139 232-407 22-177 (226)
288 3noy_A 4-hydroxy-3-methylbut-2 87.4 1.5 5.2E-05 44.2 8.2 88 300-410 43-134 (366)
289 1eye_A DHPS 1, dihydropteroate 87.4 4 0.00014 39.8 11.1 78 297-381 22-109 (280)
290 1aj0_A DHPS, dihydropteroate s 87.3 2.3 8E-05 41.5 9.4 73 301-379 36-117 (282)
291 3cpr_A Dihydrodipicolinate syn 87.2 6 0.0002 38.7 12.4 83 298-380 32-119 (304)
292 2p10_A MLL9387 protein; putati 87.2 12 0.0004 36.6 14.2 189 111-343 80-280 (286)
293 3gnh_A L-lysine, L-arginine ca 87.1 7.1 0.00024 38.1 13.1 71 300-377 164-245 (403)
294 3ffs_A Inosine-5-monophosphate 87.1 4.5 0.00016 41.4 11.8 126 151-323 146-275 (400)
295 1yx1_A Hypothetical protein PA 87.1 4.1 0.00014 37.9 10.8 196 151-407 26-223 (264)
296 3qze_A DHDPS, dihydrodipicolin 87.1 12 0.00041 36.7 14.6 107 231-353 48-155 (314)
297 3qtg_A Pyruvate kinase, PK; TI 87.0 31 0.0011 35.8 18.3 228 145-411 179-419 (461)
298 2r8w_A AGR_C_1641P; APC7498, d 86.9 5.3 0.00018 39.7 12.0 82 298-379 50-136 (332)
299 3khj_A Inosine-5-monophosphate 86.9 9 0.00031 38.5 13.8 68 306-380 107-174 (361)
300 1qwg_A PSL synthase;, (2R)-pho 86.9 0.97 3.3E-05 43.5 6.2 170 145-354 23-206 (251)
301 3vni_A Xylose isomerase domain 86.8 11 0.00039 35.2 13.9 115 231-357 21-155 (294)
302 1xky_A Dihydrodipicolinate syn 86.8 2.8 9.4E-05 41.0 9.7 83 298-380 28-115 (301)
303 1eep_A Inosine 5'-monophosphat 86.7 1.8 6E-05 44.0 8.5 68 306-380 155-223 (404)
304 3h5d_A DHDPS, dihydrodipicolin 86.7 2.6 8.9E-05 41.5 9.5 82 298-379 23-110 (311)
305 4avf_A Inosine-5'-monophosphat 86.6 2.8 9.5E-05 43.9 10.2 70 305-380 230-299 (490)
306 3kws_A Putative sugar isomeras 86.6 7.4 0.00025 36.5 12.5 111 231-358 42-170 (287)
307 3e96_A Dihydrodipicolinate syn 86.5 1.7 5.7E-05 42.9 8.0 100 297-406 27-130 (316)
308 1fob_A Beta-1,4-galactanase; B 86.5 9.6 0.00033 37.6 13.6 145 231-383 31-217 (334)
309 3civ_A Endo-beta-1,4-mannanase 86.5 6 0.0002 39.4 12.1 124 231-355 57-205 (343)
310 3tva_A Xylose isomerase domain 86.4 5.2 0.00018 37.6 11.2 112 232-357 26-162 (290)
311 3igs_A N-acetylmannosamine-6-p 86.4 1.7 5.7E-05 41.0 7.6 68 308-383 93-160 (232)
312 3obe_A Sugar phosphate isomera 86.4 2.6 8.8E-05 40.7 9.2 121 231-357 40-173 (305)
313 3d0c_A Dihydrodipicolinate syn 86.3 5 0.00017 39.5 11.3 84 297-380 27-114 (314)
314 1rvg_A Fructose-1,6-bisphospha 86.3 2.5 8.7E-05 41.7 9.1 115 270-407 5-124 (305)
315 1muw_A Xylose isomerase; atomi 86.3 2.4 8.1E-05 42.5 9.1 222 151-411 36-280 (386)
316 2yx0_A Radical SAM enzyme; pre 86.2 26 0.00088 34.1 21.4 112 232-350 184-311 (342)
317 3l5a_A NADH/flavin oxidoreduct 86.1 3.6 0.00012 42.3 10.5 140 231-376 174-343 (419)
318 1zlp_A PSR132, petal death pro 86.1 6.1 0.00021 39.2 11.8 135 233-376 52-206 (318)
319 1xky_A Dihydrodipicolinate syn 86.0 17 0.00057 35.4 14.9 101 231-346 37-138 (301)
320 3tak_A DHDPS, dihydrodipicolin 86.0 14 0.00047 35.7 14.2 101 231-346 26-127 (291)
321 3b4u_A Dihydrodipicolinate syn 86.0 3.9 0.00013 39.8 10.3 82 298-379 19-105 (294)
322 3iix_A Biotin synthetase, puta 86.0 26 0.00089 33.9 17.7 123 300-429 84-220 (348)
323 3hgj_A Chromate reductase; TIM 85.9 7.1 0.00024 38.8 12.4 121 263-384 76-264 (349)
324 2qul_A D-tagatose 3-epimerase; 85.9 17 0.00057 33.8 14.5 115 231-357 21-156 (290)
325 3a5f_A Dihydrodipicolinate syn 85.9 2.9 0.0001 40.6 9.3 81 298-379 18-103 (291)
326 3ovp_A Ribulose-phosphate 3-ep 85.9 0.83 2.8E-05 43.1 5.2 98 300-411 14-114 (228)
327 3l21_A DHDPS, dihydrodipicolin 85.7 13 0.00043 36.4 13.8 101 231-346 40-141 (304)
328 3zwt_A Dihydroorotate dehydrog 85.7 13 0.00043 37.5 14.1 104 265-379 199-327 (367)
329 2ehh_A DHDPS, dihydrodipicolin 85.7 17 0.00058 35.1 14.7 101 231-346 25-126 (294)
330 1gte_A Dihydropyrimidine dehyd 85.6 4.7 0.00016 45.9 12.2 136 232-380 653-817 (1025)
331 1q6o_A Humps, 3-keto-L-gulonat 85.5 7.9 0.00027 35.4 11.7 171 145-378 13-190 (216)
332 3dx5_A Uncharacterized protein 85.5 5.7 0.00019 37.2 10.9 118 231-357 19-146 (286)
333 1e0t_A Pyruvate kinase, PK; ph 85.2 32 0.0011 35.9 17.2 251 144-437 169-447 (470)
334 2yxg_A DHDPS, dihydrodipicolin 85.1 2.7 9.3E-05 40.7 8.6 83 297-379 15-102 (289)
335 2yxg_A DHDPS, dihydrodipicolin 85.0 17 0.00058 35.0 14.3 101 231-346 25-126 (289)
336 2x7v_A Probable endonuclease 4 85.0 6.3 0.00021 36.7 10.9 121 232-358 17-149 (287)
337 3eoo_A Methylisocitrate lyase; 84.9 9.8 0.00034 37.3 12.5 133 234-376 36-188 (298)
338 2eja_A URO-D, UPD, uroporphyri 84.8 2.8 9.5E-05 41.2 8.7 107 304-431 180-300 (338)
339 1f6k_A N-acetylneuraminate lya 84.7 8.6 0.00029 37.2 12.1 83 298-380 19-107 (293)
340 2y7e_A 3-keto-5-aminohexanoate 84.6 5.4 0.00018 38.9 10.4 127 299-428 30-165 (282)
341 2yxb_A Coenzyme B12-dependent 84.6 14 0.00048 32.5 12.4 68 233-325 62-130 (161)
342 2nuw_A 2-keto-3-deoxygluconate 84.6 3.2 0.00011 40.3 8.9 81 298-379 15-98 (288)
343 3cpr_A Dihydrodipicolinate syn 84.5 23 0.00078 34.4 15.1 101 231-346 41-142 (304)
344 1f6y_A 5-methyltetrahydrofolat 84.4 27 0.00093 33.3 15.3 123 232-385 30-168 (262)
345 1o66_A 3-methyl-2-oxobutanoate 84.4 9.9 0.00034 37.0 12.1 128 232-376 29-178 (275)
346 2r91_A 2-keto-3-deoxy-(6-phosp 84.4 3.8 0.00013 39.6 9.3 82 297-379 13-97 (286)
347 4avf_A Inosine-5'-monophosphat 84.3 9.7 0.00033 39.8 13.0 131 148-324 228-362 (490)
348 2r8w_A AGR_C_1641P; APC7498, d 84.3 17 0.00058 36.0 14.2 100 232-346 60-160 (332)
349 2ojp_A DHDPS, dihydrodipicolin 84.3 2.1 7.3E-05 41.6 7.5 82 298-379 17-103 (292)
350 3usb_A Inosine-5'-monophosphat 84.1 5.7 0.0002 41.8 11.2 68 305-378 257-324 (511)
351 1s2w_A Phosphoenolpyruvate pho 84.0 6 0.0002 38.8 10.6 135 233-377 32-188 (295)
352 3gg8_A Pyruvate kinase; malari 84.0 31 0.0011 36.4 16.5 258 144-440 204-489 (511)
353 3e49_A Uncharacterized protein 84.0 9.2 0.00032 37.8 11.9 129 299-428 28-188 (311)
354 1hjs_A Beta-1,4-galactanase; 4 84.0 12 0.0004 37.0 12.9 117 232-356 32-181 (332)
355 1w3i_A EDA, 2-keto-3-deoxy glu 83.9 3.3 0.00011 40.2 8.7 81 298-379 15-98 (293)
356 2v9d_A YAGE; dihydrodipicolini 83.8 4 0.00014 40.7 9.4 83 298-380 47-134 (343)
357 1f6k_A N-acetylneuraminate lya 83.8 16 0.00056 35.2 13.6 101 231-346 28-130 (293)
358 3khj_A Inosine-5-monophosphate 83.7 11 0.00037 37.9 12.6 127 151-323 107-236 (361)
359 3khd_A Pyruvate kinase; malari 83.7 21 0.00072 37.7 15.1 258 144-440 213-498 (520)
360 1jcn_A Inosine monophosphate d 83.6 5.3 0.00018 41.7 10.7 70 305-380 256-325 (514)
361 3na8_A Putative dihydrodipicol 83.6 19 0.00066 35.2 14.1 101 231-346 49-150 (315)
362 3hqn_D Pyruvate kinase, PK; TI 83.6 47 0.0016 34.9 17.7 257 145-441 190-479 (499)
363 1ps9_A 2,4-dienoyl-COA reducta 83.6 4.3 0.00015 43.7 10.2 117 263-380 76-249 (671)
364 2ojp_A DHDPS, dihydrodipicolin 83.5 15 0.00052 35.4 13.3 101 231-346 26-127 (292)
365 2vc6_A MOSA, dihydrodipicolina 83.4 2.7 9.1E-05 40.9 7.7 82 298-379 16-102 (292)
366 4fo4_A Inosine 5'-monophosphat 83.4 15 0.0005 37.1 13.4 126 151-323 110-240 (366)
367 1m5w_A Pyridoxal phosphate bio 83.2 3.6 0.00012 39.3 8.2 95 231-341 139-238 (243)
368 1gte_A Dihydropyrimidine dehyd 83.2 14 0.00048 42.0 14.7 78 300-378 645-734 (1025)
369 2rfg_A Dihydrodipicolinate syn 83.1 2.9 9.8E-05 40.8 7.9 84 297-380 15-103 (297)
370 1jub_A Dihydroorotate dehydrog 83.1 14 0.00049 35.5 12.9 79 300-379 103-192 (311)
371 3tdn_A FLR symmetric alpha-bet 83.1 3.6 0.00012 38.5 8.3 73 149-248 36-109 (247)
372 1o5k_A DHDPS, dihydrodipicolin 83.1 19 0.00065 35.0 13.9 101 231-346 37-138 (306)
373 2ash_A Queuine tRNA-ribosyltra 83.1 25 0.00084 35.7 14.9 126 237-381 143-277 (381)
374 2r91_A 2-keto-3-deoxy-(6-phosp 83.0 16 0.00054 35.2 13.1 98 231-346 23-122 (286)
375 3usb_A Inosine-5'-monophosphat 82.9 4.9 0.00017 42.3 10.1 131 148-324 255-389 (511)
376 2q02_A Putative cytoplasmic pr 82.8 15 0.00051 33.7 12.5 111 231-356 23-142 (272)
377 3fs2_A 2-dehydro-3-deoxyphosph 82.8 9.6 0.00033 37.5 11.4 182 146-381 53-264 (298)
378 3lab_A Putative KDPG (2-keto-3 82.7 3.6 0.00012 38.7 8.0 68 300-376 22-89 (217)
379 3vzx_A Heptaprenylglyceryl pho 82.7 32 0.0011 32.4 14.6 167 152-376 22-205 (228)
380 1i60_A IOLI protein; beta barr 82.7 4.1 0.00014 37.7 8.5 116 231-358 18-147 (278)
381 1mzh_A Deoxyribose-phosphate a 82.7 19 0.00065 33.4 13.1 89 291-380 59-153 (225)
382 1r3s_A URO-D, uroporphyrinogen 82.6 2.7 9.1E-05 42.0 7.6 70 305-378 199-282 (367)
383 3d0c_A Dihydrodipicolinate syn 82.6 15 0.00052 35.9 13.0 99 232-346 38-137 (314)
384 4ay7_A Methylcobalamin\: coenz 82.6 3.9 0.00013 40.4 8.8 70 304-377 191-267 (348)
385 3tsm_A IGPS, indole-3-glycerol 82.6 22 0.00074 34.4 13.8 161 149-376 80-246 (272)
386 2zds_A Putative DNA-binding pr 82.5 13 0.00044 35.5 12.3 173 151-356 18-239 (340)
387 3ajx_A 3-hexulose-6-phosphate 82.5 2.8 9.6E-05 37.9 7.1 74 300-380 10-85 (207)
388 3bw2_A 2-nitropropane dioxygen 82.5 15 0.00051 36.5 13.1 111 231-379 113-237 (369)
389 1f76_A Dihydroorotate dehydrog 82.4 25 0.00084 34.3 14.5 76 300-378 222-317 (336)
390 2g0w_A LMO2234 protein; putati 82.3 10 0.00034 36.0 11.3 115 231-357 40-158 (296)
391 3cqj_A L-ribulose-5-phosphate 82.3 29 0.001 32.4 14.6 120 231-357 34-170 (295)
392 3e02_A Uncharacterized protein 82.2 10 0.00036 37.4 11.5 129 299-428 28-188 (311)
393 3eb2_A Putative dihydrodipicol 82.0 2.5 8.5E-05 41.3 6.9 82 298-379 20-106 (300)
394 2g0w_A LMO2234 protein; putati 82.0 12 0.00041 35.4 11.7 231 121-411 19-253 (296)
395 3f4w_A Putative hexulose 6 pho 81.9 24 0.00082 31.6 13.3 109 239-379 24-134 (211)
396 3m47_A Orotidine 5'-phosphate 81.8 6.4 0.00022 36.9 9.5 115 232-378 83-201 (228)
397 3gk0_A PNP synthase, pyridoxin 81.7 3.8 0.00013 39.8 7.9 97 231-343 167-268 (278)
398 1ydo_A HMG-COA lyase; TIM-barr 81.6 5.7 0.0002 38.9 9.4 22 301-322 26-47 (307)
399 4djd_C C/Fe-SP, corrinoid/iron 81.6 13 0.00043 38.6 12.3 116 231-376 166-291 (446)
400 3fkr_A L-2-keto-3-deoxyarabona 81.5 28 0.00097 33.9 14.4 100 232-346 34-137 (309)
401 1egz_A Endoglucanase Z, EGZ, C 81.5 17 0.00057 34.4 12.5 57 229-288 40-97 (291)
402 4ab4_A Xenobiotic reductase B; 81.4 20 0.0007 35.9 13.6 124 260-384 71-267 (362)
403 2cw6_A Hydroxymethylglutaryl-C 81.4 5 0.00017 39.0 8.8 37 244-284 6-43 (298)
404 2hsa_B 12-oxophytodienoate red 81.4 24 0.00081 35.9 14.2 120 262-382 87-289 (402)
405 1ub3_A Aldolase protein; schif 81.1 22 0.00077 33.1 12.9 141 232-406 24-171 (220)
406 3b0p_A TRNA-dihydrouridine syn 81.0 8.8 0.0003 38.2 10.7 91 279-379 55-164 (350)
407 3ixl_A Amdase, arylmalonate de 81.0 12 0.0004 35.3 11.0 130 151-326 56-190 (240)
408 3aam_A Endonuclease IV, endoiv 80.9 11 0.00037 35.0 10.8 118 231-358 18-144 (270)
409 3a5f_A Dihydrodipicolinate syn 80.9 15 0.00051 35.5 12.0 100 231-345 26-126 (291)
410 2vc6_A MOSA, dihydrodipicolina 80.7 28 0.00095 33.5 13.9 100 232-346 26-126 (292)
411 3l5l_A Xenobiotic reductase A; 80.7 10 0.00034 37.9 11.0 123 260-383 72-270 (363)
412 3nzq_A ADC, biosynthetic argin 80.6 66 0.0023 35.0 18.1 102 231-359 153-276 (666)
413 2hjp_A Phosphonopyruvate hydro 80.5 12 0.00041 36.6 11.2 134 233-376 28-183 (290)
414 3tml_A 2-dehydro-3-deoxyphosph 80.4 21 0.00071 34.9 12.8 182 146-381 29-246 (288)
415 3tr9_A Dihydropteroate synthas 80.4 23 0.0008 35.0 13.3 127 232-380 54-202 (314)
416 2ftp_A Hydroxymethylglutaryl-C 80.2 5.7 0.00019 38.7 8.8 38 369-411 134-174 (302)
417 1o60_A 2-dehydro-3-deoxyphosph 80.0 46 0.0016 32.4 16.4 121 232-380 101-242 (292)
418 1mxs_A KDPG aldolase; 2-keto-3 80.0 4.2 0.00014 38.2 7.5 70 300-378 35-104 (225)
419 2qw5_A Xylose isomerase-like T 80.0 28 0.00096 33.4 13.8 81 231-321 35-127 (335)
420 3pm6_A Putative fructose-bisph 79.9 6.3 0.00022 38.9 9.0 115 270-407 15-142 (306)
421 4ef8_A Dihydroorotate dehydrog 79.9 52 0.0018 32.9 19.3 127 238-379 153-306 (354)
422 3vii_A Beta-glucosidase; cellu 79.8 3.9 0.00013 42.9 7.9 84 229-313 68-159 (487)
423 1wa3_A 2-keto-3-deoxy-6-phosph 79.8 3.6 0.00012 37.1 6.8 68 300-376 19-87 (205)
424 2rfg_A Dihydrodipicolinate syn 79.8 20 0.00069 34.7 12.6 100 232-346 26-126 (297)
425 4af0_A Inosine-5'-monophosphat 79.8 16 0.00054 38.9 12.4 162 148-367 280-447 (556)
426 1qo2_A Molecule: N-((5-phospho 79.7 8.8 0.0003 35.5 9.7 173 148-371 30-209 (241)
427 1xi3_A Thiamine phosphate pyro 79.5 34 0.0011 30.5 14.0 105 231-378 30-134 (215)
428 3vk5_A MOEO5; TIM barrel, tran 79.5 39 0.0013 32.9 14.3 182 145-379 50-256 (286)
429 3gka_A N-ethylmaleimide reduct 79.5 20 0.00067 36.0 12.7 124 260-384 79-275 (361)
430 3kru_A NADH:flavin oxidoreduct 79.5 16 0.00056 36.3 12.1 122 260-383 73-253 (343)
431 3txv_A Probable tagatose 6-pho 79.4 15 0.00051 38.1 11.9 107 267-385 5-139 (450)
432 3no5_A Uncharacterized protein 79.4 9.3 0.00032 37.1 9.9 126 299-429 26-161 (275)
433 3chv_A Prokaryotic domain of u 79.3 6 0.00021 38.6 8.6 127 299-429 30-165 (284)
434 2zvr_A Uncharacterized protein 78.8 6.4 0.00022 37.0 8.5 110 231-357 45-173 (290)
435 3ffs_A Inosine-5-monophosphate 78.7 8.6 0.00029 39.3 9.8 67 306-379 146-212 (400)
436 1ep3_A Dihydroorotate dehydrog 78.6 17 0.00057 34.8 11.6 127 232-378 116-269 (311)
437 3m0z_A Putative aldolase; MCSG 78.6 9.1 0.00031 36.3 9.1 93 231-345 149-248 (249)
438 2nuw_A 2-keto-3-deoxygluconate 78.6 16 0.00056 35.2 11.5 98 231-346 24-123 (288)
439 3e96_A Dihydrodipicolinate syn 78.5 28 0.00097 34.0 13.3 114 231-361 37-152 (316)
440 3w01_A Heptaprenylglyceryl pho 78.5 41 0.0014 31.8 13.8 167 152-376 27-211 (235)
441 3gr4_A Pyruvate kinase isozyme 78.5 55 0.0019 34.8 16.1 227 145-411 240-489 (550)
442 3lot_A Uncharacterized protein 78.4 14 0.00047 36.6 10.9 129 299-428 28-190 (314)
443 2hk0_A D-psicose 3-epimerase; 78.3 26 0.0009 33.1 12.8 111 233-357 42-174 (309)
444 2qr6_A IMP dehydrogenase/GMP r 78.2 9.8 0.00034 38.2 10.1 95 271-382 145-242 (393)
445 3o63_A Probable thiamine-phosp 78.2 30 0.001 32.6 12.9 113 231-378 47-161 (243)
446 1yad_A Regulatory protein TENI 77.9 12 0.00041 34.1 9.9 103 232-378 34-136 (221)
447 3bld_A Queuine tRNA-ribosyltra 77.8 40 0.0014 34.2 14.5 130 237-385 145-288 (386)
448 1gnx_A Beta-glucosidase; hydro 77.8 6.1 0.00021 41.3 8.6 84 229-314 73-164 (479)
449 4af0_A Inosine-5'-monophosphat 77.7 17 0.00058 38.6 11.9 78 304-387 281-358 (556)
450 4e38_A Keto-hydroxyglutarate-a 77.6 6.8 0.00023 37.1 8.1 70 300-378 43-112 (232)
451 2e28_A Pyruvate kinase, PK; al 77.5 57 0.002 34.9 16.2 252 144-436 170-449 (587)
452 3rot_A ABC sugar transporter, 77.5 45 0.0015 30.9 14.3 193 232-450 78-282 (297)
453 2htm_A Thiazole biosynthesis p 77.5 3.5 0.00012 39.9 6.1 86 307-406 136-228 (268)
454 1ccw_A Protein (glutamate muta 77.5 17 0.00059 30.9 10.1 74 233-325 47-121 (137)
455 2z2u_A UPF0026 protein MJ0257; 77.4 50 0.0017 31.3 17.3 110 237-356 172-295 (311)
456 1thf_D HISF protein; thermophI 77.3 12 0.00042 34.6 9.9 71 304-378 31-102 (253)
457 1w3i_A EDA, 2-keto-3-deoxy glu 77.3 20 0.00067 34.7 11.7 98 231-346 24-123 (293)
458 2dqw_A Dihydropteroate synthas 77.2 31 0.0011 33.7 13.0 127 232-385 57-204 (294)
459 1a0c_A Xylose isomerase; ketol 77.1 8.6 0.00029 39.6 9.4 121 229-357 169-299 (438)
460 1vff_A Beta-glucosidase; glyco 77.1 5 0.00017 41.3 7.6 59 230-290 53-111 (423)
461 1vrd_A Inosine-5'-monophosphat 77.0 20 0.00067 37.1 12.3 129 149-323 237-369 (494)
462 3i65_A Dihydroorotate dehydrog 76.8 21 0.0007 36.7 12.0 76 301-379 281-374 (415)
463 2inf_A URO-D, UPD, uroporphyri 76.7 7.5 0.00026 38.5 8.7 71 304-378 194-271 (359)
464 3m6y_A 4-hydroxy-2-oxoglutarat 76.7 8.3 0.00029 37.0 8.3 94 231-346 172-272 (275)
465 2gjl_A Hypothetical protein PA 76.7 40 0.0014 32.7 13.9 109 231-379 87-201 (328)
466 3c8f_A Pyruvate formate-lyase 76.7 42 0.0014 30.0 14.3 82 232-322 115-198 (245)
467 1tv8_A MOAA, molybdenum cofact 76.6 14 0.00048 35.9 10.5 126 261-411 50-190 (340)
468 3eeg_A 2-isopropylmalate synth 76.5 32 0.0011 33.9 13.1 51 301-354 26-76 (325)
469 3f5l_A Beta-glucosidase; beta- 76.4 4.7 0.00016 42.2 7.3 83 229-313 75-166 (481)
470 3t05_A Pyruvate kinase, PK; te 76.2 54 0.0019 35.2 15.5 254 145-438 191-470 (606)
471 3aty_A Tcoye, prostaglandin F2 76.1 5.1 0.00017 40.6 7.2 22 265-286 171-194 (379)
472 1wcg_A Thioglucosidase, myrosi 75.9 5.5 0.00019 41.5 7.6 83 230-313 62-152 (464)
473 2j78_A Beta-glucosidase A; fam 75.9 7.2 0.00025 40.7 8.5 83 230-314 84-174 (468)
474 1wbh_A KHG/KDPG aldolase; lyas 75.7 8.2 0.00028 35.8 8.1 71 300-379 25-95 (214)
475 3ble_A Citramalate synthase fr 75.7 5.6 0.00019 39.5 7.4 15 416-430 197-211 (337)
476 1h5y_A HISF; histidine biosynt 75.7 9.7 0.00033 34.8 8.6 71 304-378 34-105 (253)
477 4hz8_A Beta-glucosidase; BGLB, 75.5 5.3 0.00018 41.4 7.3 83 229-313 60-150 (444)
478 1o94_A Tmadh, trimethylamine d 75.4 23 0.0008 38.5 12.8 140 231-379 153-321 (729)
479 3gnp_A OS03G0212800 protein; b 75.4 5.4 0.00019 41.8 7.4 83 229-313 72-163 (488)
480 3k30_A Histamine dehydrogenase 75.4 15 0.00052 39.5 11.3 140 231-378 160-323 (690)
481 2y88_A Phosphoribosyl isomeras 75.4 4 0.00014 37.8 5.9 72 304-379 32-103 (244)
482 3aal_A Probable endonuclease 4 75.3 23 0.00079 33.5 11.4 120 231-359 22-155 (303)
483 1n7k_A Deoxyribose-phosphate a 75.2 30 0.001 32.7 11.9 141 232-407 41-190 (234)
484 1zco_A 2-dehydro-3-deoxyphosph 75.2 23 0.00079 33.8 11.3 63 275-344 185-258 (262)
485 3u0h_A Xylose isomerase domain 75.0 11 0.00038 34.7 8.9 113 231-356 20-144 (281)
486 3i4k_A Muconate lactonizing en 75.0 46 0.0016 33.2 14.0 96 144-285 204-300 (383)
487 2vef_A Dihydropteroate synthas 74.9 8.5 0.00029 38.0 8.3 77 297-379 26-112 (314)
488 3k13_A 5-methyltetrahydrofolat 74.9 27 0.00093 34.2 11.9 127 301-442 35-178 (300)
489 1pbg_A PGAL, 6-phospho-beta-D- 74.8 5.7 0.0002 41.4 7.4 64 230-295 57-120 (468)
490 1o94_A Tmadh, trimethylamine d 74.5 43 0.0015 36.3 14.7 119 263-382 79-260 (729)
491 1vhc_A Putative KHG/KDPG aldol 74.5 9.8 0.00033 35.6 8.3 70 300-378 26-95 (224)
492 1eep_A Inosine 5'-monophosphat 74.5 67 0.0023 32.2 15.2 128 150-323 154-285 (404)
493 4gj1_A 1-(5-phosphoribosyl)-5- 74.3 19 0.00066 33.8 10.4 201 149-406 32-242 (243)
494 1h1n_A Endo type cellulase ENG 74.2 5 0.00017 38.6 6.4 60 230-289 34-93 (305)
495 2xed_A Putative maleate isomer 74.1 30 0.001 33.0 11.9 148 126-325 54-217 (273)
496 2nx9_A Oxaloacetate decarboxyl 74.0 87 0.003 32.4 16.7 155 232-407 35-198 (464)
497 1lt8_A Betaine-homocysteine me 74.0 26 0.0009 35.7 12.0 196 127-354 22-248 (406)
498 3cny_A Inositol catabolism pro 73.9 9.6 0.00033 35.7 8.2 109 231-357 35-164 (301)
499 1xla_A D-xylose isomerase; iso 73.7 9.1 0.00031 38.3 8.4 58 230-289 119-180 (394)
500 3h5d_A DHDPS, dihydrodipicolin 73.7 50 0.0017 32.2 13.6 100 231-345 32-133 (311)
No 1
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=100.00 E-value=1e-72 Score=566.56 Aligned_cols=300 Identities=43% Similarity=0.727 Sum_probs=287.3
Q ss_pred CCCccEEEeCCccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEec
Q 012949 123 IPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTP 202 (452)
Q Consensus 123 ~p~~V~I~D~TLRDG~Q~~~~~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~ 202 (452)
+|++|+|+|+|||||+|+++..|++++|++|++.|+++||++||+|||++|+++|++.|.++++..+++.+++++++|+|
T Consensus 3 ~~~~v~i~DtTlRDG~Q~~~~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~l~~ 82 (307)
T 1ydo_A 3 YPKKVTIKEVGPRDGLQNEPVWIATEDKITWINQLSRTGLSYIEITSFVHPKWIPALRDAIDVAKGIDREKGVTYAALVP 82 (307)
T ss_dssp CCSBCEEEECHHHHTGGGSSSCCCHHHHHHHHHHHHTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCTTCEEEEECC
T ss_pred CCCceEEEECCCCCCcCCCCCCCCHHHHHHHHHHHHHcCCCEEEECCCcCcccccccCCHHHHHHHhhhcCCCeEEEEeC
Confidence 78899999999999999999999999999999999999999999999999999999999998888777667889999988
Q ss_pred chhhhhhhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCC
Q 012949 203 NLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSI 282 (452)
Q Consensus 203 ~~~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~ 282 (452)
+.+ ++++|+++|++.|++|.++||.|++.|+|+|++++++++.+++++||++|+
T Consensus 83 ~~~--------------------------~i~~a~~~g~~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~ 136 (307)
T 1ydo_A 83 NQR--------------------------GLENALEGGINEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANL 136 (307)
T ss_dssp SHH--------------------------HHHHHHHHTCSEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTC
T ss_pred CHH--------------------------hHHHHHhCCcCEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCC
Confidence 754 899999999999999999999999999999999999999999999999999
Q ss_pred cEEEEEEeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHH
Q 012949 283 PVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSL 362 (452)
Q Consensus 283 ~V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ 362 (452)
+|+++|+++|+||++++++++++.++++.+.++|+++|+|+||+|+++|.+++++|+.+++++|+++|++|+|||+|||+
T Consensus 137 ~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~l~~H~Hnd~Gla~ 216 (307)
T 1ydo_A 137 TTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEFGISELSLGDTIGAANPAQVETVLEALLARFPANQIALHFHDTRGTAL 216 (307)
T ss_dssp EEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHHTCSCEEEECSSCCCCHHHHHHHHHHHHTTSCGGGEEEECBGGGSCHH
T ss_pred EEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCCchHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998899999999999999
Q ss_pred HHHHHHHHcCCCEEeecccCCCCCCCCCCCCCcccHHHHHHHHHcCCCCCCCChhhHHHHHHHHHHHhCCCCCCCccccc
Q 012949 363 PNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVETNVDLRKLMLAGDFINKHLGRPSGSKTAIAL 442 (452)
Q Consensus 363 ANaLaAl~aGa~~VD~Sv~GlGecP~a~graGNaalE~vv~~L~~~Gi~t~iDl~~L~~la~~v~~~~g~~~p~~~pi~G 442 (452)
||+++|+++||++||+|++|||||||||||+||++||+|+++|+.+|+++++|+++|.++++++++.+|+++|++.|.+|
T Consensus 217 AN~laAv~aGa~~vd~tv~GlGecp~a~graGN~~~E~lv~~L~~~g~~t~idl~~L~~~~~~v~~~~~~~~~~~~~~~~ 296 (307)
T 1ydo_A 217 ANMVTALQMGITVFDGSAGGLGGCPYAPGSSGNAATEDIVYMLEQMDIKTNVKLEKLLSAAKWIEEKMGKPLPSRNLQVF 296 (307)
T ss_dssp HHHHHHHHHTCCEEEEBGGGCCEETTEEEEECBCBHHHHHHHHHHTTCBCCCCHHHHHHHHHHHHHHHTSCCCCHHHHHH
T ss_pred HHHHHHHHhCCCEEEEcccccCCCCCCCCCCCChhHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHCCCCchhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred chhhhh
Q 012949 443 NRIAAD 448 (452)
Q Consensus 443 ~~vf~h 448 (452)
.....|
T Consensus 297 ~~~~~~ 302 (307)
T 1ydo_A 297 KSSLEH 302 (307)
T ss_dssp TC----
T ss_pred HHhhhh
Confidence 766554
No 2
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=100.00 E-value=3.1e-70 Score=545.91 Aligned_cols=297 Identities=63% Similarity=1.021 Sum_probs=286.3
Q ss_pred CCCCccEEEeCCccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEe
Q 012949 122 GIPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLT 201 (452)
Q Consensus 122 ~~p~~V~I~D~TLRDG~Q~~~~~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~ 201 (452)
.+|++|+|+|+|||||+|+++..|++++|++|++.|+++||++||+|+|++|+++|++.|.+++++.+++.+++++++++
T Consensus 1 ~~~~~v~i~D~tlRDG~Q~~~~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~l~ 80 (298)
T 2cw6_A 1 TLPKRVKIVEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQKFPGINYPVLT 80 (298)
T ss_dssp CCCSBCEEEECTTTHHHHTCSSCCCHHHHHHHHHHHHHTTCSEECCEECCCTTTCGGGTTHHHHHHHSCCCTTCBCCEEC
T ss_pred CCCCceEEEECCCCcccCCCCCCCCHHHHHHHHHHHHHcCcCEEEECCCcCcccccccCCHHHHHHHHhhCCCCEEEEEc
Confidence 46889999999999999999999999999999999999999999999999999999999998888888777788888888
Q ss_pred cchhhhhhhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCC
Q 012949 202 PNLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLS 281 (452)
Q Consensus 202 ~~~~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G 281 (452)
++.+ ++++|+++|++.|+++.++||.|++.|+++|++++++.+.+++++||++|
T Consensus 81 ~~~~--------------------------~i~~a~~ag~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G 134 (298)
T 2cw6_A 81 PNLK--------------------------GFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSAN 134 (298)
T ss_dssp CSHH--------------------------HHHHHHHTTCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTT
T ss_pred CCHH--------------------------hHHHHHHCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCC
Confidence 7654 89999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEEEeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcH
Q 012949 282 IPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQS 361 (452)
Q Consensus 282 ~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA 361 (452)
++|+++++++||||++++++++++.++++.+.++|+++|+|+||+|+++|.+++++++.+++++|+++|++|+|||+|||
T Consensus 135 ~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~i~~H~Hn~~Gla 214 (298)
T 2cw6_A 135 ISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQA 214 (298)
T ss_dssp CEEEEEEETTTCBTTTBSCCHHHHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHSCGGGEEEEEBCTTSCH
T ss_pred CeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCCchH
Confidence 99999999999999999999999999999999999999999999999999999999999999999889999999999999
Q ss_pred HHHHHHHHHcCCCEEeecccCCCCCCCCCCCCCcccHHHHHHHHHcCCCCCCCChhhHHHHHHHHHHHhCCCCCCCcccc
Q 012949 362 LPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVETNVDLRKLMLAGDFINKHLGRPSGSKTAIA 441 (452)
Q Consensus 362 ~ANaLaAl~aGa~~VD~Sv~GlGecP~a~graGNaalE~vv~~L~~~Gi~t~iDl~~L~~la~~v~~~~g~~~p~~~pi~ 441 (452)
+||+++|+++||++||+|++|+|||||||||+||++||+|+++|+.+|+++++|+++|.++++++++.+|+++|+++|.+
T Consensus 215 ~An~laA~~aGa~~vd~tv~GlG~cp~a~g~aGN~~~E~lv~~l~~~g~~~~idl~~l~~~~~~~~~~~~~~~~~~~~~~ 294 (298)
T 2cw6_A 215 LANTLMALQMGVSVVDSSVAGLGGCPYAQGASGNLATEDLVYMLEGLGIHTGVNLQKLLEAGNFICQALNRKTSSKVAQA 294 (298)
T ss_dssp HHHHHHHHHTTCCEEEEBTTSCCCCTTSCSSCCBCBHHHHHHHHHHHTCBCCCCHHHHHHHHHHHHHHTTCCCCCHHHHH
T ss_pred HHHHHHHHHhCCCEEEeecccccCCCCCCCCcCChhHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHCCCCchhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cch
Q 012949 442 LNR 444 (452)
Q Consensus 442 G~~ 444 (452)
|..
T Consensus 295 ~~~ 297 (298)
T 2cw6_A 295 TCK 297 (298)
T ss_dssp HC-
T ss_pred hcc
Confidence 853
No 3
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=100.00 E-value=3.7e-69 Score=539.19 Aligned_cols=295 Identities=56% Similarity=0.951 Sum_probs=283.9
Q ss_pred CCCCccEEEeCCccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEe
Q 012949 122 GIPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLT 201 (452)
Q Consensus 122 ~~p~~V~I~D~TLRDG~Q~~~~~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~ 201 (452)
++|++|+|+|+|||||+|+++..|++++|++|++.|+++|+++||+|+|++|+++|++.|.++++..+.+.+++++++++
T Consensus 4 ~~~~~v~i~D~tlRDG~Q~~~~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~ 83 (302)
T 2ftp_A 4 NLPKKVRLVEVGPRDGLQNEKQPIEVADKIRLVDDLSAAGLDYIEVGSFVSPKWVPQMAGSAEVFAGIRQRPGVTYAALA 83 (302)
T ss_dssp CCCSBCEEEECTTTHHHHTSSSCCCHHHHHHHHHHHHHTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCTTSEEEEEC
T ss_pred CCCCCcEEEeCCCCCCccCCCCCCCHHHHHHHHHHHHHcCcCEEEECCCcCccccccccCHHHHHHHhhhcCCCEEEEEe
Confidence 47899999999999999999999999999999999999999999999999999999999988877777666778888888
Q ss_pred cchhhhhhhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCC
Q 012949 202 PNLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLS 281 (452)
Q Consensus 202 ~~~~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G 281 (452)
++.+ ++++|+++|++.|++|++.||.|++.|+|+|++++++++.+++++||++|
T Consensus 84 ~~~~--------------------------~i~~a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G 137 (302)
T 2ftp_A 84 PNLK--------------------------GFEAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQ 137 (302)
T ss_dssp CSHH--------------------------HHHHHHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTT
T ss_pred CCHH--------------------------HHHHHHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCC
Confidence 7544 99999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEEEeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcH
Q 012949 282 IPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQS 361 (452)
Q Consensus 282 ~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA 361 (452)
++|+++|+++|++|++++++++++.++++.+.++|+++|+|+||+|+++|.+++++++.+++++|+++|++|+|||+|||
T Consensus 138 ~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla 217 (302)
T 2ftp_A 138 VRVRGYISCVLGCPYDGDVDPRQVAWVARELQQMGCYEVSLGDTIGVGTAGATRRLIEAVASEVPRERLAGHFHDTYGQA 217 (302)
T ss_dssp CEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHTTCSEEEEEESSSCCCHHHHHHHHHHHTTTSCGGGEEEEEBCTTSCH
T ss_pred CeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEeCCCccHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998789999999999999
Q ss_pred HHHHHHHHHcCCCEEeecccCCCCCCCCCCCCCcccHHHHHHHHHcCCCCCCCChhhHHHHHHHHHHHhCCCCCCCcccc
Q 012949 362 LPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVETNVDLRKLMLAGDFINKHLGRPSGSKTAIA 441 (452)
Q Consensus 362 ~ANaLaAl~aGa~~VD~Sv~GlGecP~a~graGNaalE~vv~~L~~~Gi~t~iDl~~L~~la~~v~~~~g~~~p~~~pi~ 441 (452)
+||+++|+++||+.||+|++|||||||||||+||++||+|+++|+.+|+++++|+++|.++++++++.+|+++|+++|.+
T Consensus 218 ~An~laAv~aGa~~vd~tv~GlG~cp~a~gr~GN~~~E~lv~~l~~~g~~~~idl~~l~~~~~~~~~~~~~~~~~~~~~~ 297 (302)
T 2ftp_A 218 LANIYASLLEGIAVFDSSVAGLGGCPYAKGATGNVASEDVLYLLNGLEIHTGVDMHALVDAGQRICAVLGKSNGSRAAKA 297 (302)
T ss_dssp HHHHHHHHHTTCCEEEEBGGGCCBCGGGTTCBCBCBHHHHHHHHHHTTCBCCCCHHHHHHHHHHHHHHHCCCCSCHHHHH
T ss_pred HHHHHHHHHhCCCEEEecccccCCCCCCCCCCCChhHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHHhCCCCCccchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred c
Q 012949 442 L 442 (452)
Q Consensus 442 G 442 (452)
+
T Consensus 298 ~ 298 (302)
T 2ftp_A 298 L 298 (302)
T ss_dssp H
T ss_pred c
Confidence 4
No 4
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=100.00 E-value=5.1e-67 Score=537.08 Aligned_cols=288 Identities=21% Similarity=0.312 Sum_probs=262.3
Q ss_pred CCCccEEEeCCccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEec
Q 012949 123 IPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTP 202 (452)
Q Consensus 123 ~p~~V~I~D~TLRDG~Q~~~~~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~ 202 (452)
+|++|+|+|||||||+|+++..|++++|++|++.|+++||++||+|||++. | .|.+.+.+..+.++++++++|++
T Consensus 9 ~~~~v~I~DtTLRDG~Q~~~~~~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~---~--~d~e~v~~i~~~~~~~~i~~l~r 83 (370)
T 3rmj_A 9 QTNRVIIFDTTLRDGEQSPGAAMTKEEKIRVARQLEKLGVDIIEAGFAAAS---P--GDFEAVNAIAKTITKSTVCSLSR 83 (370)
T ss_dssp -CCBCEEEECCCCCCTTSTTCCCCHHHHHHHHHHHHHHTCSEEEEEEGGGC---H--HHHHHHHHHHTTCSSSEEEEEEE
T ss_pred CCCCEEEEECCCCccccCCCCCcCHHHHHHHHHHHHHcCCCEEEEeCCCCC---H--HHHHHHHHHHHhCCCCeEEEEec
Confidence 688999999999999999999999999999999999999999999998643 2 35555555555677889999886
Q ss_pred chhhhhhhhhhhhhccchhhhhhhhccHHhHHHHHH----cCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHH
Q 012949 203 NLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIA----AGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAK 278 (452)
Q Consensus 203 ~~~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~----~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak 278 (452)
... +++++|++ +|+++|++|.++||.|++.|+|+|++++++++.+++++||
T Consensus 84 ~~~-------------------------~di~~a~~al~~ag~~~v~if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~ 138 (370)
T 3rmj_A 84 AIE-------------------------RDIRQAGEAVAPAPKKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAR 138 (370)
T ss_dssp SSH-------------------------HHHHHHHHHHTTSSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHT
T ss_pred CCH-------------------------HHHHHHHHHHhhCCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHH
Confidence 433 36777766 8999999999999999999999999999999999999999
Q ss_pred hCCCcEEEEEEeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCC---ccEEEEeC
Q 012949 279 VLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPV---EKLAVHLH 355 (452)
Q Consensus 279 ~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~---~~l~vH~H 355 (452)
++|..|. |+||++++++++++.++++.+.++||++|+|+||+|+++|.+++++|+.+++++|. ++|++|+|
T Consensus 139 ~~g~~v~------~~~ed~~r~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~~~~l~~H~H 212 (370)
T 3rmj_A 139 EYTDDVE------FSCEDALRSEIDFLAEICGAVIEAGATTINIPDTVGYSIPYKTEEFFRELIAKTPNGGKVVWSAHCH 212 (370)
T ss_dssp TTCSCEE------EEEETGGGSCHHHHHHHHHHHHHHTCCEEEEECSSSCCCHHHHHHHHHHHHHHSTTGGGSEEEEECB
T ss_pred HcCCEEE------EecCCCCccCHHHHHHHHHHHHHcCCCEEEecCccCCcCHHHHHHHHHHHHHhCCCcCceEEEEEeC
Confidence 9999876 67899999999999999999999999999999999999999999999999999996 78999999
Q ss_pred CCcCcHHHHHHHHHHcCCCEEeecccCCCCCCCCCCCCCcccHHHHHHHHHc----CCCCCCCChhhHHHHHHHHHHHhC
Q 012949 356 DTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSG----LGVETNVDLRKLMLAGDFINKHLG 431 (452)
Q Consensus 356 nd~GlA~ANaLaAl~aGa~~VD~Sv~GlGecP~a~graGNaalE~vv~~L~~----~Gi~t~iDl~~L~~la~~v~~~~g 431 (452)
||+|||+||+++|+++||++||+||+|||| |+||++||+|+++|+. +|+++++|+++|.++++++++++|
T Consensus 213 nd~GlAvAN~laAv~aGa~~vd~tv~GlGe------raGN~~lE~vv~~L~~~~~~~g~~tgidl~~L~~~s~~v~~~~g 286 (370)
T 3rmj_A 213 NDLGLAVANSLAALKGGARQVECTVNGLGE------RAGNASVEEIVMALKVRHDLFGLETGIDTTQIVPSSKLVSTITG 286 (370)
T ss_dssp CTTSCHHHHHHHHHHTTCCEEEEBGGGCSS------TTCBCBHHHHHHHHHHTHHHHCCBCCCCGGGHHHHHHHHHHHHT
T ss_pred CCCChHHHHHHHHHHhCCCEEEEeccccCc------ccccccHHHHHHHHHhhhhccCCCCCcCHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999 9999999999999974 599999999999999999999999
Q ss_pred CCCCCCcccccchhhhhccCC
Q 012949 432 RPSGSKTAIALNRIAADASKI 452 (452)
Q Consensus 432 ~~~p~~~pi~G~~vf~h~Sgi 452 (452)
+++|+++|++|+++|+|+|||
T Consensus 287 ~~~~~~~p~vG~~aF~h~sGi 307 (370)
T 3rmj_A 287 YPVQPNKAIVGANAFSHESGI 307 (370)
T ss_dssp CCCCSSCTTTSTTTTC-----
T ss_pred CCCCCCCCccchhHHHhcccc
Confidence 999999999999999999998
No 5
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=2e-67 Score=532.00 Aligned_cols=289 Identities=24% Similarity=0.292 Sum_probs=236.2
Q ss_pred CCCCccEEEeCCccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEe
Q 012949 122 GIPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLT 201 (452)
Q Consensus 122 ~~p~~V~I~D~TLRDG~Q~~~~~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~ 201 (452)
.+|++|+|+|||||||+|+++..|++++|++|++.|+++||++||+|||++. | .|.+.+.+..+..+++++++|+
T Consensus 2 ~~~~~v~I~DttlRDG~Q~~~~~~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~---~--~d~e~v~~i~~~~~~~~i~~l~ 76 (325)
T 3eeg_A 2 SLGKRIFVFDTTLRDGEQVPGCQLNTEEKIIVAKALDELGVDVIEAGFPVSS---P--GDFNSVVEITKAVTRPTICALT 76 (325)
T ss_dssp --CEECEEEECGGGCC-------CCTTHHHHHHHHHHHHTCSEEEEECTTSC---H--HHHHHHHHHHHHCCSSEEEEEC
T ss_pred CCCCceEEEECCCCCcccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCC---H--hHHHHHHHHHHhCCCCEEEEee
Confidence 4788999999999999999999999999999999999999999999998632 2 2444444444456889999998
Q ss_pred cchhhhhhhhhhhhhccchhhhhhhhccHHhHHHHHHc----CCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHH
Q 012949 202 PNLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAA----GAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAA 277 (452)
Q Consensus 202 ~~~~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~----Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~A 277 (452)
++.+ +++++|+++ |+++|++|+++||.|++.|+|+|++++++++.+++++|
T Consensus 77 r~~~-------------------------~~i~~a~~al~~ag~~~v~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a 131 (325)
T 3eeg_A 77 RAKE-------------------------ADINIAGEALRFAKRSRIHTGIGSSDIHIEHKLRSTRENILEMAVAAVKQA 131 (325)
T ss_dssp CSCH-------------------------HHHHHHHHHHTTCSSEEEEEEEECSHHHHC----CCCTTGGGTTHHHHHHH
T ss_pred cCCH-------------------------HHHHHHHHhhcccCCCEEEEEecccHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 6544 378888887 99999999999999999999999999999999999999
Q ss_pred HhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCC---ccEEEEe
Q 012949 278 KVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPV---EKLAVHL 354 (452)
Q Consensus 278 k~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~---~~l~vH~ 354 (452)
|+.|+.|. |+||+.++++++++.++++.+.++|+++|+|+||+|+++|.+++++|+.+++++|+ ++|++|+
T Consensus 132 ~~~g~~v~------f~~~d~~~~~~~~~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~i~~H~ 205 (325)
T 3eeg_A 132 KKVVHEVE------FFCEDAGRADQAFLARMVEAVIEAGADVVNIPDTTGYMLPWQYGERIKYLMDNVSNIDKAILSAHC 205 (325)
T ss_dssp HTTSSEEE------EEEETGGGSCHHHHHHHHHHHHHHTCSEEECCBSSSCCCHHHHHHHHHHHHHHCSCGGGSEEEECB
T ss_pred HHCCCEEE------EEccccccchHHHHHHHHHHHHhcCCCEEEecCccCCcCHHHHHHHHHHHHHhCCCCCceEEEEEe
Confidence 99999875 77899999999999999999999999999999999999999999999999999996 7899999
Q ss_pred CCCcCcHHHHHHHHHHcCCCEEeecccCCCCCCCCCCCCCcccHHHHHHHHHc----CCCCCCCChhhHHHHHHHHHHHh
Q 012949 355 HDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSG----LGVETNVDLRKLMLAGDFINKHL 430 (452)
Q Consensus 355 Hnd~GlA~ANaLaAl~aGa~~VD~Sv~GlGecP~a~graGNaalE~vv~~L~~----~Gi~t~iDl~~L~~la~~v~~~~ 430 (452)
|||+|||+||+++|+++||++||+|++|||| |+||++||+|+++|+. +|+++++|+++|.++++++++++
T Consensus 206 Hnd~GlA~AN~laA~~aGa~~vd~tv~GlGe------r~GN~~lE~vv~~L~~~~~~~g~~tgidl~~L~~~s~~v~~~~ 279 (325)
T 3eeg_A 206 HNDLGLATANSLAALQNGARQVECTINGIGE------RAGNTALEEVVMAMECHKETLGLETGINHKKLVPISHLVSTLM 279 (325)
T ss_dssp CCTTSCHHHHHHHHHHHTCCEEEEBGGGCCS------TTCCCBHHHHHHHHHHTHHHHCEECCCCGGGHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHhCCCEEEEecccccc------cccchhHHHHHHHHHhhhhccCCCCCcCHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999 9999999999999984 69999999999999999999999
Q ss_pred CCCCCCCcccccchhhhhccCC
Q 012949 431 GRPSGSKTAIALNRIAADASKI 452 (452)
Q Consensus 431 g~~~p~~~pi~G~~vf~h~Sgi 452 (452)
|+++|+++|++|+++|+|+|||
T Consensus 280 g~~~~~~~p~vG~~af~h~sGi 301 (325)
T 3eeg_A 280 RMQVQSNKAIVGRNAFAHSSGI 301 (325)
T ss_dssp TC--------------------
T ss_pred CCCCCCCCCccchhHHHHhccc
Confidence 9999999999999999999997
No 6
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=100.00 E-value=3.5e-65 Score=508.10 Aligned_cols=289 Identities=53% Similarity=0.849 Sum_probs=273.2
Q ss_pred CCCccEEEeCCccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEec
Q 012949 123 IPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTP 202 (452)
Q Consensus 123 ~p~~V~I~D~TLRDG~Q~~~~~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~ 202 (452)
+|++|+|+|||||||.|+++..|++++|++|++.|+++|+++||+|+|++++|+|+++|..++++.+++.++++++++++
T Consensus 1 ~~~~v~i~d~tlRDG~Q~~~~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~~~~~v~~l~~ 80 (295)
T 1ydn_A 1 MAEHVEIVEMAARDGLQNEKRFVPTADKIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRADGVRYSVLVP 80 (295)
T ss_dssp -CCBCEEEECTTTHHHHTSSSCCCHHHHHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCSSSEEEEECS
T ss_pred CCCceEEEECCCCccccCCCCCcCHHHHHHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhCCCCEEEEEeC
Confidence 57899999999999999999999999999999999999999999999999999999998888888777666888888887
Q ss_pred chhhhhhhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCC
Q 012949 203 NLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSI 282 (452)
Q Consensus 203 ~~~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~ 282 (452)
+.+ ++++|+++|++.|++++++||.|.+.|++++++++++++.+++++||+.|+
T Consensus 81 n~~--------------------------~i~~a~~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~ 134 (295)
T 1ydn_A 81 NMK--------------------------GYEAAAAAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGL 134 (295)
T ss_dssp SHH--------------------------HHHHHHHTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTC
T ss_pred CHH--------------------------HHHHHHHCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCC
Confidence 654 899999999999999999999999999999999999999999999999999
Q ss_pred cEEEEEEeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHH
Q 012949 283 PVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSL 362 (452)
Q Consensus 283 ~V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ 362 (452)
+|+++|+++||||++++++++++.++++.+.++|++.|+|+||+|.++|.+++++++.+++.+|.++|++|+|||+|||+
T Consensus 135 ~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~Dt~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~ 214 (295)
T 1ydn_A 135 AIRGYVSCVVECPYDGPVTPQAVASVTEQLFSLGCHEVSLGDTIGRGTPDTVAAMLDAVLAIAPAHSLAGHYHDTGGRAL 214 (295)
T ss_dssp EEEEEEECSSEETTTEECCHHHHHHHHHHHHHHTCSEEEEEETTSCCCHHHHHHHHHHHHTTSCGGGEEEEEBCTTSCHH
T ss_pred eEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCcchHH
Confidence 99999999999999999999999999999999999999999999999999999999999999987789999999999999
Q ss_pred HHHHHHHHcCCCEEeecccCCCCCCCCCCCCCcccHHHHHHHHHcCCCCCCCChhhHHHHHHHHHHHhCCCCCCC
Q 012949 363 PNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVETNVDLRKLMLAGDFINKHLGRPSGSK 437 (452)
Q Consensus 363 ANaLaAl~aGa~~VD~Sv~GlGecP~a~graGNaalE~vv~~L~~~Gi~t~iDl~~L~~la~~v~~~~g~~~p~~ 437 (452)
||+++|+++||+.||+|++|+|||||||||+||++||+|+++|+.+|+++++|+++|.++++++++..+.+.+..
T Consensus 215 an~l~Ai~aG~~~vd~sv~GlG~cp~a~g~~GN~~~e~lv~~l~~~g~~~~id~~~l~~~~~~~~~~~~~~~~~~ 289 (295)
T 1ydn_A 215 DNIRVSLEKGLRVFDASVGGLGGCPFAPGAKGNVDTVAVVEMLHEMGFETGLDLDRLRSAGLFTQALRQDKAALE 289 (295)
T ss_dssp HHHHHHHHHTCCEEEEBTTCCSCBTTBTTSCCBCBHHHHHHHHHHTTCBCCCCHHHHHHHHHHHHHHHCC-----
T ss_pred HHHHHHHHhCCCEEEeccccCCCCCCCCCCcCChhHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHCCCCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999887754
No 7
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=100.00 E-value=1.8e-65 Score=520.02 Aligned_cols=295 Identities=18% Similarity=0.218 Sum_probs=263.0
Q ss_pred hcCCCCccEEEeCCccccCCCCCCCCCHHHHHHHHH-HHHHCCCCEEEEecCCC-C---CcccccCCHHHHHHHHHhccC
Q 012949 120 LKGIPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIR-RLVSSGLPVVEATSFVS-P---KWVPQLADARDVMEAVRDLEG 194 (452)
Q Consensus 120 ~~~~p~~V~I~D~TLRDG~Q~~~~~~~~~~k~~i~~-~L~~~Gv~~IEvG~~~s-~---~~~p~~~D~e~v~~~i~~~~~ 194 (452)
|..+|++|+|+|||||||+|++++.|++++|++|++ .|+++||++||+|+|++ | +++|++++..+ .+..+++
T Consensus 13 ~~~~~~~v~I~DtTlRDG~Q~~~~~~~~~~k~~i~~~~L~~~Gv~~IE~g~~~~~~~~~~~v~~~~~~~~---~~~~~~~ 89 (337)
T 3ble_A 13 MTKVETRLEILDVTLRDGEQTRGVSFSTSEKLNIAKFLLQKLNVDRVEIASARVSKGELETVQKIMEWAA---TEQLTER 89 (337)
T ss_dssp ------CCEEEECHHHHHTTSTTCCCCHHHHHHHHHHHHHTTCCSEEEEEETTSCTTHHHHHHHHHHHHH---HTTCGGG
T ss_pred cccCCCceEEEECCCCCCCCCCCCCcCHHHHHHHHHHHHHHcCCCEEEEeCCCCChhHHHHHHHHHhhhh---hhccCCC
Confidence 345788999999999999999999999999999999 99999999999999985 5 23333322211 1113566
Q ss_pred CceeEEecchhhhhhhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHH
Q 012949 195 ARLPVLTPNLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVA 274 (452)
Q Consensus 195 ~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v 274 (452)
+++++|+|+.+ ++++|+++|++.|++|+++||.|++.|+|+|++++++++.+++
T Consensus 90 ~~i~~l~~~~~--------------------------~i~~a~~~g~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v 143 (337)
T 3ble_A 90 IEILGFVDGNK--------------------------TVDWIKDSGAKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVI 143 (337)
T ss_dssp EEEEEESSTTH--------------------------HHHHHHHHTCCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHH
T ss_pred CeEEEEccchh--------------------------hHHHHHHCCCCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHH
Confidence 78888888765 8999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEe
Q 012949 275 HAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHL 354 (452)
Q Consensus 275 ~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~ 354 (452)
++||++|++|++++++ |++.++++++++.++++.+.++||++|+|+||+|+++|.+++++|+.+++++|.++|++|+
T Consensus 144 ~~ak~~G~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~p~~~i~~H~ 220 (337)
T 3ble_A 144 EYAIKSGLKINVYLED---WSNGFRNSPDYVKSLVEHLSKEHIERIFLPDTLGVLSPEETFQGVDSLIQKYPDIHFEFHG 220 (337)
T ss_dssp HHHHHTTCEEEEEEET---HHHHHHHCHHHHHHHHHHHHTSCCSEEEEECTTCCCCHHHHHHHHHHHHHHCTTSCEEEEC
T ss_pred HHHHHCCCEEEEEEEE---CCCCCcCCHHHHHHHHHHHHHcCCCEEEEecCCCCcCHHHHHHHHHHHHHhcCCCeEEEEe
Confidence 9999999999977764 4557899999999999999999999999999999999999999999999999888999999
Q ss_pred CCCcCcHHHHHHHHHHcCCCEEeecccCCCCCCCCCCCCCcccHHHHHHHHHcC-CCCCCCChhhHHHHHHHHHHHhCCC
Q 012949 355 HDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGL-GVETNVDLRKLMLAGDFINKHLGRP 433 (452)
Q Consensus 355 Hnd~GlA~ANaLaAl~aGa~~VD~Sv~GlGecP~a~graGNaalE~vv~~L~~~-Gi~t~iDl~~L~~la~~v~~~~g~~ 433 (452)
|||+|||+||+++|+++||++||+|++|||| |+||++||+|+++|+.+ |+++++|+++|.++++++++.+|++
T Consensus 221 Hnd~GlA~AN~laAv~aGa~~vd~tv~GlG~------~aGN~~~E~lv~~L~~~~g~~tgidl~~L~~~~~~v~~~~~~~ 294 (337)
T 3ble_A 221 HNDYDLSVANSLQAIRAGVKGLHASINGLGE------RAGNTPLEALVTTIHDKSNSKTNINEIAITEASRLVEVFSGKR 294 (337)
T ss_dssp BCTTSCHHHHHHHHHHTTCSEEEEBGGGCSS------TTCBCBHHHHHHHHHHHSSCCCCCCGGGHHHHHHHHHHHHCCC
T ss_pred cCCcchHHHHHHHHHHhCCCEEEEecccccc------cccchhHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHCCC
Confidence 9999999999999999999999999999999 99999999999999986 9999999999999999999999999
Q ss_pred CCCCcccccchhhhhccCC
Q 012949 434 SGSKTAIALNRIAADASKI 452 (452)
Q Consensus 434 ~p~~~pi~G~~vf~h~Sgi 452 (452)
+|+++|++|.++|+|+|||
T Consensus 295 ~~~~~~~vg~~~f~h~~Gi 313 (337)
T 3ble_A 295 ISANRPIVGEDVFTQTAGV 313 (337)
T ss_dssp CCTTCTTTSTTTTCC----
T ss_pred CCCCccchhhhhhheeccc
Confidence 9999999999999999997
No 8
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=100.00 E-value=1.2e-62 Score=510.98 Aligned_cols=286 Identities=18% Similarity=0.180 Sum_probs=241.4
Q ss_pred CCCccEEEeCCccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHh-ccCCceeEEe
Q 012949 123 IPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRD-LEGARLPVLT 201 (452)
Q Consensus 123 ~p~~V~I~D~TLRDG~Q~~~~~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~-~~~~~l~~l~ 201 (452)
++++|+|+|||||||+|.++..|++++|++|++.|+++||++||+|||. +.|+. .+ ..+.+.+ ....++.+++
T Consensus 36 ~~~~V~I~DtTLRDG~Q~~~~~~s~eeKl~Ia~~L~~~Gv~~IEvG~P~---asp~d--~~-~~~~i~~~~~~~~v~~~~ 109 (423)
T 3ivs_A 36 RVNNFSIIESTLREGEQFANAFFDTEKKIQIAKALDNFGVDYIELTSPV---ASEQS--RQ-DCEAICKLGLKCKILTHI 109 (423)
T ss_dssp CTTSCEEEECTTTGGGGSTTCCCCHHHHHHHHHHHHHHTCSEEEECCTT---SCHHH--HH-HHHHHHTSCCSSEEEEEE
T ss_pred CCCcEEEEECCCCCCCCCCCCCcCHHHHHHHHHHHHHcCCCEEEEeecc---cCHHH--HH-HHHHHHhcCCCCEEEEee
Confidence 3567999999999999999999999999999999999999999999964 33543 22 2333333 2233333332
Q ss_pred cchhhhhhhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCC
Q 012949 202 PNLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLS 281 (452)
Q Consensus 202 ~~~~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G 281 (452)
+. ..+++++|+++|++.|++|+++||.|++.++++|++++++.+.+++++||++|
T Consensus 110 r~-------------------------~~~di~~A~~aG~~~V~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G 164 (423)
T 3ivs_A 110 RC-------------------------HMDDARVAVETGVDGVDVVIGTSQYLRKYSHGKDMTYIIDSATEVINFVKSKG 164 (423)
T ss_dssp ES-------------------------CHHHHHHHHHTTCSEEEEEEEC-------------CHHHHHHHHHHHHHHTTT
T ss_pred cc-------------------------ChhhHHHHHHcCCCEEEEEeeccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCC
Confidence 11 12489999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEEEeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcH
Q 012949 282 IPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQS 361 (452)
Q Consensus 282 ~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA 361 (452)
++|++++ ++.++++++++.++++.+.++|+++|+|+||+|+++|.+++++|+.++++++ ++|++|+|||+|||
T Consensus 165 ~~V~~~~------eda~r~d~~~~~~v~~~~~~~Ga~~i~l~DTvG~~~P~~v~~lv~~l~~~~~-~~i~~H~Hnd~GlA 237 (423)
T 3ivs_A 165 IEVRFSS------EDSFRSDLVDLLSLYKAVDKIGVNRVGIADTVGCATPRQVYDLIRTLRGVVS-CDIECHFHNDTGMA 237 (423)
T ss_dssp CEEEEEE------ESGGGSCHHHHHHHHHHHHHHCCSEEEEEETTSCCCHHHHHHHHHHHHHHCS-SEEEEEEBCTTSCH
T ss_pred CEEEEEE------ccCcCCCHHHHHHHHHHHHHhCCCccccCCccCcCCHHHHHHHHHHHHhhcC-CeEEEEECCCCchH
Confidence 9998544 4667899999999999999999999999999999999999999999999876 58999999999999
Q ss_pred HHHHHHHHHcCCCEEeecccCCCCCCCCCCCCCcccHHHHHHHHHc---CCCCCCCChhhHHHHHHHHHHHhCCCCCCCc
Q 012949 362 LPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSG---LGVETNVDLRKLMLAGDFINKHLGRPSGSKT 438 (452)
Q Consensus 362 ~ANaLaAl~aGa~~VD~Sv~GlGecP~a~graGNaalE~vv~~L~~---~Gi~t~iDl~~L~~la~~v~~~~g~~~p~~~ 438 (452)
+||+++|+++||++||+||+|+|| |+||++||+|+++|.. +++++++|+++|.++++++++++|+++|+++
T Consensus 238 vAN~laAv~aGa~~vd~ti~GlGE------RaGNa~Le~vv~~L~~~~~~~~~~~idl~~L~~is~~v~~~~~~~v~~~k 311 (423)
T 3ivs_A 238 IANAYCALEAGATHIDTSILGIGE------RNGITPLGALLARMYVTDREYITHKYKLNQLRELENLVADAVEVQIPFNN 311 (423)
T ss_dssp HHHHHHHHHTTCCEEEEBGGGCSS------TTCBCBHHHHHHHHHHHCHHHHHHHSCGGGHHHHHHHHHHHTTCCCCTTC
T ss_pred HHHHHHHHHhCCCEEEEecccccC------cccchhHHHHHHHHHhhcccCCCCCcCHHHHHHHHHHHHHHhCCCCCCCC
Confidence 999999999999999999999999 9999999999999864 3678999999999999999999999999999
Q ss_pred ccccchhhhhccCC
Q 012949 439 AIALNRIAADASKI 452 (452)
Q Consensus 439 pi~G~~vf~h~Sgi 452 (452)
|++|+++|+|+|||
T Consensus 312 pivG~~aFah~sGi 325 (423)
T 3ivs_A 312 YITGMCAFTHKAGI 325 (423)
T ss_dssp TTTSTTTTEEECSG
T ss_pred CchhHhHHHhhcch
Confidence 99999999999997
No 9
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=100.00 E-value=8.2e-61 Score=493.34 Aligned_cols=282 Identities=21% Similarity=0.237 Sum_probs=244.0
Q ss_pred ccEEEeCCccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhc-cCCceeEEecch
Q 012949 126 FVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDL-EGARLPVLTPNL 204 (452)
Q Consensus 126 ~V~I~D~TLRDG~Q~~~~~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~-~~~~l~~l~~~~ 204 (452)
+|+|+|||||||+|+++..|++++|++|++.|+++||++||+|||.+ .|+.. +.++.+++. .+.++.++.+.
T Consensus 3 ~v~I~DtTLRDG~Q~~~~~~~~~~k~~ia~~L~~~Gv~~IE~g~p~~---~~~~~---~~~~~i~~~~~~~~v~~~~r~- 75 (382)
T 2ztj_A 3 EWKIIDSTLREGEQFEKANFSTQDKVEIAKALDEFGIEYIEVTTPVA---SPQSR---KDAEVLASLGLKAKVVTHIQC- 75 (382)
T ss_dssp CCEEEEEEETGGGGSTTCCCCHHHHHHHHHHHHHHTCSEEEECCTTS---CHHHH---HHHHHHHTSCCSSEEEEEEES-
T ss_pred ceEEEECCCCcccCCCCCCcCHHHHHHHHHHHHHcCcCEEEEcCCcC---CHHHH---HHHHHHHhcCCCcEEEEEccc-
Confidence 59999999999999999999999999999999999999999999653 34432 234444432 33444444322
Q ss_pred hhhhhhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCC--C
Q 012949 205 KVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLS--I 282 (452)
Q Consensus 205 ~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G--~ 282 (452)
..+++++|+++|++.|++|.++||.|++ |+|+|++++++++.+++++||+.| +
T Consensus 76 ------------------------~~~di~~a~~~g~~~v~i~~~~s~~~~~-~~~~s~~e~l~~~~~~v~~ak~~g~~~ 130 (382)
T 2ztj_A 76 ------------------------RLDAAKVAVETGVQGIDLLFGTSKYLRA-PHGRDIPRIIEEAKEVIAYIREAAPHV 130 (382)
T ss_dssp ------------------------CHHHHHHHHHTTCSEEEEEECC---------CCCHHHHHHHHHHHHHHHHHHCTTS
T ss_pred ------------------------ChhhHHHHHHcCCCEEEEEeccCHHHHH-HhCCCHHHHHHHHHHHHHHHHHcCCCE
Confidence 2248999999999999999999999999 999999999999999999999999 7
Q ss_pred cEEEEEEeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhC-CCccEEEEeCCCcCcH
Q 012949 283 PVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVV-PVEKLAVHLHDTYGQS 361 (452)
Q Consensus 283 ~V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~-p~~~l~vH~Hnd~GlA 361 (452)
+|+++ .++.++++++++.++++.+.++ |++|+|+||+|+++|.+++++|+.+++.+ |.++|++|+|||+|||
T Consensus 131 ~v~~~------~ed~~~~~~~~~~~~~~~~~~~-a~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~~i~~H~Hnd~GlA 203 (382)
T 2ztj_A 131 EVRFS------AEDTFRSEEQDLLAVYEAVAPY-VDRVGLADTVGVATPRQVYALVREVRRVVGPRVDIEFHGHNDTGCA 203 (382)
T ss_dssp EEEEE------ETTTTTSCHHHHHHHHHHHGGG-CSEEEEEETTSCCCHHHHHHHHHHHHHHHTTTSEEEEEEBCTTSCH
T ss_pred EEEEE------EEeCCCCCHHHHHHHHHHHHHh-cCEEEecCCCCCCCHHHHHHHHHHHHHhcCCCCeEEEEeCCCccHH
Confidence 77633 3467899999999999999999 99999999999999999999999999985 6779999999999999
Q ss_pred HHHHHHHHHcCCCEEeecccCCCCCCCCCCCCCcccHHHHHHHHHcC---CCCCCCChhhHHHHHHHHHHHhCCCCCCCc
Q 012949 362 LPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGL---GVETNVDLRKLMLAGDFINKHLGRPSGSKT 438 (452)
Q Consensus 362 ~ANaLaAl~aGa~~VD~Sv~GlGecP~a~graGNaalE~vv~~L~~~---Gi~t~iDl~~L~~la~~v~~~~g~~~p~~~ 438 (452)
+||+++|+++||++||+|++|||| |+||++||+|+++|+.+ |+++++|+++|.++++++++++|+++|+++
T Consensus 204 vAN~laAv~aGa~~vd~tv~GlGe------raGN~~lE~vv~~L~~~~~~g~~t~idl~~L~~~s~~v~~~~~~~~~~~~ 277 (382)
T 2ztj_A 204 IANAYEAIEAGATHVDTTILGIGE------RNGITPLGGFLARMYTLQPEYVRRKYKLEMLPELDRMVARMVGVEIPFNN 277 (382)
T ss_dssp HHHHHHHHHTTCCEEEEBGGGCSS------TTCBCBHHHHHHHHHHHCHHHHHHHSCGGGHHHHHHHHHHHHTCCCCTTC
T ss_pred HHHHHHHHHhCCCEEEEccccccc------cccchhHHHHHHHHHhhcCCcccCCCCHHHHHHHHHHHHHHhCCCCCcCC
Confidence 999999999999999999999999 99999999999999753 578999999999999999999999999999
Q ss_pred ccccchhhhhccCC
Q 012949 439 AIALNRIAADASKI 452 (452)
Q Consensus 439 pi~G~~vf~h~Sgi 452 (452)
|++|.++|+|+|||
T Consensus 278 p~vG~~~f~h~sGi 291 (382)
T 2ztj_A 278 YITGETAFSHKAGM 291 (382)
T ss_dssp TTTSTTTTEECCHH
T ss_pred CcCCcchhheeccc
Confidence 99999999999986
No 10
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=100.00 E-value=4.4e-60 Score=472.05 Aligned_cols=273 Identities=21% Similarity=0.262 Sum_probs=235.2
Q ss_pred CccEEEeCCccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEecch
Q 012949 125 RFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNL 204 (452)
Q Consensus 125 ~~V~I~D~TLRDG~Q~~~~~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~~~ 204 (452)
++|+|+|||||||+|+++..|++++|++|++.|+++||++||+|||.+ .| .|.+.+....+..+++++++|+|+.
T Consensus 4 ~~v~I~DttlRDG~Q~~~~~~~~~~K~~i~~~L~~~Gv~~IE~g~p~~---~~--~d~e~v~~i~~~~~~~~i~~l~~~~ 78 (293)
T 3ewb_X 4 KKIQFFDTTLRDGEQTPGVNFDVKEKIQIALQLEKLGIDVIEAGFPIS---SP--GDFECVKAIAKAIKHCSVTGLARCV 78 (293)
T ss_dssp EEEEEEECTTTCCC-----CCCHHHHHHHHHHHHHHTCSEEEEECGGG---CH--HHHHHHHHHHHHCCSSEEEEEEESS
T ss_pred CeeEEEECCCCCcCcCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCC---Cc--cHHHHHHHHHHhcCCCEEEEEecCC
Confidence 469999999999999999999999999999999999999999999753 23 2445544444556889999999876
Q ss_pred hhhhhhhhhhhhccchhhhhhhhccHHhHHHHHH----cCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhC
Q 012949 205 KVILQRSILFQQCHASVISSNLWVYLQGFEAAIA----AGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVL 280 (452)
Q Consensus 205 ~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~----~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~ 280 (452)
+ ++++++++ +|+++|++|+++||.|++.|+|+|++++++.+.+++++||+.
T Consensus 79 ~-------------------------~di~~a~~~~~~ag~~~v~i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~ 133 (293)
T 3ewb_X 79 E-------------------------GDIDRAEEALKDAVSPQIHIFLATSDVHMEYKLKMSRAEVLASIKHHISYARQK 133 (293)
T ss_dssp H-------------------------HHHHHHHHHHTTCSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTT
T ss_pred H-------------------------HHHHHHHHHHhhcCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhC
Confidence 4 25666665 699999999999999999999999999999999999999999
Q ss_pred CCcEEEEEEeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCC---ccEEEEeCCC
Q 012949 281 SIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPV---EKLAVHLHDT 357 (452)
Q Consensus 281 G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~---~~l~vH~Hnd 357 (452)
|.+|+ |+++++++++++++.++++.+.++|+++|+|+||+|+++|.+++++++.+++++|+ ++|++|+|||
T Consensus 134 g~~v~------~~~~d~~~~~~~~~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~l~~H~Hnd 207 (293)
T 3ewb_X 134 FDVVQ------FSPEDATRSDRAFLIEAVQTAIDAGATVINIPDTVGYTNPTEFGQLFQDLRREIKQFDDIIFASHCHDD 207 (293)
T ss_dssp CSCEE------EEEETGGGSCHHHHHHHHHHHHHTTCCEEEEECSSSCCCHHHHHHHHHHHHHHCTTGGGSEEEEECBCT
T ss_pred CCEEE------EEeccCCCCCHHHHHHHHHHHHHcCCCEEEecCCCCCCCHHHHHHHHHHHHHhcCCccCceEEEEeCCC
Confidence 99988 34567789999999999999999999999999999999999999999999999985 5799999999
Q ss_pred cCcHHHHHHHHHHcCCCEEeecccCCCCCCCCCCCCCcccHHHHHHHHHc----CCCCCCCChhhHHHHHHHHHHHhCCC
Q 012949 358 YGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSG----LGVETNVDLRKLMLAGDFINKHLGRP 433 (452)
Q Consensus 358 ~GlA~ANaLaAl~aGa~~VD~Sv~GlGecP~a~graGNaalE~vv~~L~~----~Gi~t~iDl~~L~~la~~v~~~~g~~ 433 (452)
+|||+||+++|+++||++||+|++|||| |+||++||+|+++|+. +|++|++|+++|.++++++++.+|++
T Consensus 208 ~Gla~AN~laA~~aGa~~vd~sv~GlGe------raGN~~~E~vv~~L~~~~~~~g~~tgidl~~L~~~s~~v~~~~g~~ 281 (293)
T 3ewb_X 208 LGMATANALAAIENGARRVEGTINGIGE------RAGNTALEEVAVALHIRKDFYQAETNIVLNQFKNSSDLISRLSGMP 281 (293)
T ss_dssp TSCHHHHHHHHHHTTCCEEEEBGGGCCT------TTCBCBHHHHHHHHHHTHHHHCEEECCCGGGHHHHHHHHHHC----
T ss_pred cChHHHHHHHHHHhCCCEEEeecccccc------ccccHhHHHHHHHHHhhhhhcCCCCCCCHHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999999 9999999999999985 69999999999999999999999999
Q ss_pred CCCCcc
Q 012949 434 SGSKTA 439 (452)
Q Consensus 434 ~p~~~p 439 (452)
+|+++.
T Consensus 282 ~~~~~~ 287 (293)
T 3ewb_X 282 VPRNEG 287 (293)
T ss_dssp ------
T ss_pred CCCCCC
Confidence 999864
No 11
>3hq1_A 2-isopropylmalate synthase; LEUA, mycobacterium tuberculosis inhibition, bromopyruvate, amino-acid biosynthesis; HET: FLC; 1.70A {Mycobacterium tuberculosis} PDB: 1sr9_A 3hpz_A 3hps_A* 3fig_A 3u6w_A 3hpx_A
Probab=100.00 E-value=5.8e-60 Score=509.07 Aligned_cols=298 Identities=16% Similarity=0.118 Sum_probs=264.2
Q ss_pred CCCccEEEeCCccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhc---cCCceeE
Q 012949 123 IPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDL---EGARLPV 199 (452)
Q Consensus 123 ~p~~V~I~D~TLRDG~Q~~~~~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~---~~~~l~~ 199 (452)
+.+.++|+|+|||||+|+++..|++++|++|+++|+++||++||+|||.+. | .|.+.+.+.++.. .++++++
T Consensus 68 ~~~~p~i~DtTLRDGeQ~~g~~~s~eeKl~Ia~~L~~lGVd~IEaGfP~as---p--~D~e~v~~i~~~~l~~~~~~i~a 142 (644)
T 3hq1_A 68 IDRAPLWCAVDLRDGNQALIDPMSPARKRRMFDLLVRMGYKEIEVGFPSAS---Q--TDFDFVREIIEQGAIPDDVTIQV 142 (644)
T ss_dssp CCSCCEEEECCCCCCGGGCSSCCCHHHHHHHHHHHHHHTCSEEEEECTTTC---H--HHHHHHHHHHHTTCSCTTCEEEE
T ss_pred cCCCCEEEECCCCccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCC---h--hHHHHHHHHHhcCCCCCCeEEEE
Confidence 667799999999999999999999999999999999999999999997532 2 3555555544442 4789999
Q ss_pred EecchhhhhhhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHh
Q 012949 200 LTPNLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKV 279 (452)
Q Consensus 200 l~~~~~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~ 279 (452)
|+++++.+++| .+++++.++.++|++|.++||.|++.|+|+|++++++.+.++++++++
T Consensus 143 L~r~~~~did~---------------------a~eal~~a~~~~Vhif~stSd~h~~~~l~~s~eevle~~~~~v~~a~~ 201 (644)
T 3hq1_A 143 LTQCRPELIER---------------------TFQACSGAPRAIVHFYNSTSILQRRVVFRANRAEVQAIATDGARKCVE 201 (644)
T ss_dssp EEESCHHHHHH---------------------HHHHHTTCSEEEEEEEEECCHHHHHHTTCCCHHHHHHHHHHHHHHHHH
T ss_pred EecCCHhhHHH---------------------HHHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Confidence 99987643322 455556789999999999999999999999999999999999988887
Q ss_pred CCCc-EEEEEEeeecCCCCCCCCHHHHHHHHHHHHHC---CcC---EEEEcCCcCCCcHHHHHHHHHHHHHhCC---Ccc
Q 012949 280 LSIP-VRGYVSCVVGCPVEGAIPPSKVAYVAKELHDM---GCF---EISLGDTIGVGTPGTVVPMLEAVMAVVP---VEK 349 (452)
Q Consensus 280 ~G~~-V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~---Gad---~I~L~DT~G~~~P~~v~~li~~l~~~~p---~~~ 349 (452)
++.. +.+.+.+.|++++.++++++|+.++++.+.++ |++ .|+|+||+|+++|..++++|+.+++++| .++
T Consensus 202 ~~~~~~~~~~~v~fs~Edasrtd~dfl~ev~~aa~eaG~~Gad~~~~I~LpDTvG~~tP~~~~~li~~l~~~v~~~~~v~ 281 (644)
T 3hq1_A 202 QAAKYPGTQWRFEYSPESYTGTELEYAKQVCDAVGEVIAPTPERPIIFNLPATVEMTTPNVYADSIEWMSRNLANRESVI 281 (644)
T ss_dssp HHHHSCSSEEEEEEEEETGGGSCHHHHHHHHHHHHHHHCCCSSSCEEEEEEESSCCSCHHHHHHHHHHHHHHSTTGGGEE
T ss_pred HhhhccCceEEEEEcCcccCCCCHHHHHHHHHHHHHhcCCCCCceeEEEecCCCcccCHHHHHHHHHHHHHhcccccCce
Confidence 6533 11123344778899999999999999999985 677 8999999999999999999999999997 468
Q ss_pred EEEEeCCCcCcHHHHHHHHHHcCCCEEeecccCCCCCCCCCCCCCcccHHHHHHHHHcCCCCCCCChhhHHHHHHHHHHH
Q 012949 350 LAVHLHDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVETNVDLRKLMLAGDFINKH 429 (452)
Q Consensus 350 l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~Sv~GlGecP~a~graGNaalE~vv~~L~~~Gi~t~iDl~~L~~la~~v~~~ 429 (452)
|++|+|||+|||+||+++|+++||++||+|++|+|| |+||++||+|+++|+.+|+++++|+++|.+++++++++
T Consensus 282 l~vH~HND~GlAvANslaAv~AGA~~Vdgti~G~GE------RaGNa~LE~lv~~L~~~Gi~tgidl~~L~~is~~ve~~ 355 (644)
T 3hq1_A 282 LSLHPHNDRGTAVAAAELGFAAGADRIEGCLFGNGE------RTGNVCLVTLGLNLFSRGVDPQIDFSNIDEIRRTVEYC 355 (644)
T ss_dssp EEEEEBCTTSCHHHHHHHHHHTTCCEEEEBGGGCSS------TTCBCBHHHHHHHHHTTTCCCSSCCTTHHHHHHHHHHH
T ss_pred EEEecCCCCCcHHHHHHHHHHhCCCEEEecCCCCCc------cccCccHHHHHHHHHhcccCCccCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred hCCCCCCCcccccchhhhhccCC
Q 012949 430 LGRPSGSKTAIALNRIAADASKI 452 (452)
Q Consensus 430 ~g~~~p~~~pi~G~~vf~h~Sgi 452 (452)
+|+++|+++|++|+++|+|+|||
T Consensus 356 ~g~~v~~~kpiVG~~aFah~SGi 378 (644)
T 3hq1_A 356 NQLPVHERHPYGGDLVYTAFSGS 378 (644)
T ss_dssp HSCCCCTTCTTTSTTTTEECCHH
T ss_pred hCCCCCCCcccccccceeecccc
Confidence 99999999999999999999997
No 12
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=100.00 E-value=5.8e-54 Score=457.13 Aligned_cols=289 Identities=19% Similarity=0.242 Sum_probs=261.4
Q ss_pred CCccEEEeCCccccCCCCCC-CCCHHHHHHHHHHHHHCCCCEEEEecCCC---C-CcccccCCHHHHHHHHHh-ccCCce
Q 012949 124 PRFVKIVEVGPRDGLQNEKN-TVPTGVKVELIRRLVSSGLPVVEATSFVS---P-KWVPQLADARDVMEAVRD-LEGARL 197 (452)
Q Consensus 124 p~~V~I~D~TLRDG~Q~~~~-~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s---~-~~~p~~~D~e~v~~~i~~-~~~~~l 197 (452)
|++|+|+|||||||.|+++. .|++++|++|++.|+++||++||+|++++ + +|+ ..|.++.++.+++ ++++++
T Consensus 22 ~~~V~I~DtTLRDG~Qs~~~~~~~tedKl~Ia~~L~~~Gv~~IE~G~patF~~~~rfl--~~d~~e~lr~l~~~~~~~~l 99 (539)
T 1rqb_A 22 PREVGITELVLRDAHQSLMATRMAMEDMVGACADIDAAGYWSVECWGGATYDSCIRFL--NEDPWERLRTFRKLMPNSRL 99 (539)
T ss_dssp SEECEEEECTTTHHHHHHSTTCCCGGGTGGGHHHHHHTTCSEEEEEETTHHHHHHHTS--CCCHHHHHHHHHHHCTTSCE
T ss_pred CCceEEEECCCCchhccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCcccccccchhcc--CCCHHHHHHHHHHhCCCCEE
Confidence 35799999999999999964 79999999999999999999999998643 1 222 2477788888875 688999
Q ss_pred eEEecchhhhhhhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHH
Q 012949 198 PVLTPNLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAA 277 (452)
Q Consensus 198 ~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~A 277 (452)
++|+++.+ +.+|..+++++++ +++++++++|++.|+||.++||+ +++.+++++|
T Consensus 100 ~~L~R~~N-----~~G~~~ypddv~~-------~~ve~a~~aGvd~vrIf~s~sd~--------------~ni~~~i~~a 153 (539)
T 1rqb_A 100 QMLLRGQN-----LLGYRHYNDEVVD-------RFVDKSAENGMDVFRVFDAMNDP--------------RNMAHAMAAV 153 (539)
T ss_dssp EEEECGGG-----TTSSSCCCHHHHH-------HHHHHHHHTTCCEEEECCTTCCT--------------HHHHHHHHHH
T ss_pred EEEecccc-----ccCcccCcccccH-------HHHHHHHhCCCCEEEEEEehhHH--------------HHHHHHHHHH
Confidence 99996544 5678887776655 48999999999999999999995 5678999999
Q ss_pred HhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCC-CccEEEEeCC
Q 012949 278 KVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVP-VEKLAVHLHD 356 (452)
Q Consensus 278 k~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p-~~~l~vH~Hn 356 (452)
|+.|.+|++++++++ ..+++++++.++++++.++||++|+|+||+|+++|.+++++|+.+++++| .++|++|+||
T Consensus 154 k~~G~~v~~~i~~~~----~~~~~~e~~~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~i~I~~H~Hn 229 (539)
T 1rqb_A 154 KKAGKHAQGTICYTI----SPVHTVEGYVKLAGQLLDMGADSIALKDMAALLKPQPAYDIIKAIKDTYGQKTQINLHCHS 229 (539)
T ss_dssp HHTTCEEEEEEECCC----STTCCHHHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHHCTTCCEEEEEBC
T ss_pred HHCCCeEEEEEEeee----CCCCCHHHHHHHHHHHHHcCCCEEEeCCCCCCcCHHHHHHHHHHHHHhcCCCceEEEEeCC
Confidence 999999999998765 45779999999999999999999999999999999999999999999997 7899999999
Q ss_pred CcCcHHHHHHHHHHcCCCEEeecccCCCCCCCCCCCCCcccHHHHHHHHHcCCCCCCCChhhHHHHHHHHHHHhCCCCCC
Q 012949 357 TYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVETNVDLRKLMLAGDFINKHLGRPSGS 436 (452)
Q Consensus 357 d~GlA~ANaLaAl~aGa~~VD~Sv~GlGecP~a~graGNaalE~vv~~L~~~Gi~t~iDl~~L~~la~~v~~~~g~~~p~ 436 (452)
|+|||+||+++|+++||++||+|++|+|+ |+||++||+|+++|+.+|+++++|+++|.+++++++++.+.+.|.
T Consensus 230 d~GlAvAN~laAveAGa~~VD~ti~g~Ge------rtGN~~lE~lv~~L~~~g~~tgidl~~L~~is~~v~~~~~~~~~~ 303 (539)
T 1rqb_A 230 TTGVTEVSLMKAIEAGVDVVDTAISSMSL------GPGHNPTESVAEMLEGTGYTTNLDYDRLHKIRDHFKAIRPKYKKF 303 (539)
T ss_dssp TTSCHHHHHHHHHHTTCSEEEEBCGGGCS------TTSBCBHHHHHHHTTTSSEECCCCHHHHHHHHHHHHHHGGGGGGG
T ss_pred CCChHHHHHHHHHHhCCCEEEEeccccCC------CccChhHHHHHHHHHhcCCCchhhHHHHHHHHHHHHHHhCCCcCC
Confidence 99999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred Cccc-ccchhhhhcc
Q 012949 437 KTAI-ALNRIAADAS 450 (452)
Q Consensus 437 ~~pi-~G~~vf~h~S 450 (452)
+.|+ +|.++|.|++
T Consensus 304 ~~~~~~~~~v~~he~ 318 (539)
T 1rqb_A 304 ESKTLVDTSIFKSQI 318 (539)
T ss_dssp CCSCSCCCTHHHHCC
T ss_pred CCCccCCCceEEecC
Confidence 9999 9999999984
No 13
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=100.00 E-value=1.2e-52 Score=441.15 Aligned_cols=290 Identities=18% Similarity=0.237 Sum_probs=255.4
Q ss_pred CCCCccEEEeCCccccCCCCCC-CCCHHHHHHHHHHHHHCCCCEEEEecCCC---C-CcccccCCHHHHHHHHHh-ccCC
Q 012949 122 GIPRFVKIVEVGPRDGLQNEKN-TVPTGVKVELIRRLVSSGLPVVEATSFVS---P-KWVPQLADARDVMEAVRD-LEGA 195 (452)
Q Consensus 122 ~~p~~V~I~D~TLRDG~Q~~~~-~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s---~-~~~p~~~D~e~v~~~i~~-~~~~ 195 (452)
.-+++|+|+|||||||.|+++. .|++++|++|++.|+++||+.||+|++++ + +|+ ..|.++.++.+++ ++++
T Consensus 3 ~~~~~V~I~DtTLRDG~Qs~~~~~~~~~dkl~Ia~~L~~~Gv~~IE~g~~atF~~~~r~~--~~d~~e~l~~i~~~~~~~ 80 (464)
T 2nx9_A 3 QAIKRVGVTDVVLRDAHQSLFATRLRIDDMLPIAQQLDQIGYWSLECWGGATFDSCIRFL--GEDPWQRLRLLKQAMPNT 80 (464)
T ss_dssp -CCCCCEEEECTTTHHHHHHSTTCCCGGGTGGGHHHHHTSCCSEEEEEETTHHHHHHHTT--CCCHHHHHHHHHHHCSSS
T ss_pred CCCCCcEEEECCccccccCCCCcCCCHHHHHHHHHHHHHcCCCEEEeCcCccccchhhcc--CCCHHHHHHHHHHhCCCC
Confidence 3467899999999999999865 79999999999999999999999998543 1 222 2477778888775 6889
Q ss_pred ceeEEecchhhhhhhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHH
Q 012949 196 RLPVLTPNLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAH 275 (452)
Q Consensus 196 ~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~ 275 (452)
++++|++..+ +.+|..+++++++ +++++++++|++.|+||.++||+ +++.++++
T Consensus 81 ~l~~l~R~~N-----~~G~~~~~ddv~~-------~~v~~a~~~Gvd~i~if~~~sd~--------------~ni~~~i~ 134 (464)
T 2nx9_A 81 PLQMLLRGQN-----LLGYRHYADDVVD-------TFVERAVKNGMDVFRVFDAMNDV--------------RNMQQALQ 134 (464)
T ss_dssp CEEEEECGGG-----TTSSSCCCHHHHH-------HHHHHHHHTTCCEEEECCTTCCT--------------HHHHHHHH
T ss_pred eEEEEecccc-----ccCcccccchhhH-------HHHHHHHhCCcCEEEEEEecCHH--------------HHHHHHHH
Confidence 9999986544 5678777777665 48999999999999999999996 56678999
Q ss_pred HHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeC
Q 012949 276 AAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLH 355 (452)
Q Consensus 276 ~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~H 355 (452)
+||+.|.+|+++++++++ .+++++++.++++++.++||++|+|+||+|+++|.+++++|+.++++++ ++|++|+|
T Consensus 135 ~ak~~G~~v~~~i~~~~~----~~~~~e~~~~~a~~l~~~Gad~I~l~DT~G~~~P~~v~~lv~~l~~~~~-~~i~~H~H 209 (464)
T 2nx9_A 135 AVKKMGAHAQGTLCYTTS----PVHNLQTWVDVAQQLAELGVDSIALKDMAGILTPYAAEELVSTLKKQVD-VELHLHCH 209 (464)
T ss_dssp HHHHTTCEEEEEEECCCC----TTCCHHHHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHCC-SCEEEEEC
T ss_pred HHHHCCCEEEEEEEeeeC----CCCCHHHHHHHHHHHHHCCCCEEEEcCCCCCcCHHHHHHHHHHHHHhcC-CeEEEEEC
Confidence 999999999999987654 4678999999999999999999999999999999999999999999994 68999999
Q ss_pred CCcCcHHHHHHHHHHcCCCEEeecccCCCCCCCCCCCCCcccHHHHHHHHHcCCCCCCCChhhHHHHHHHHHHHhCCCCC
Q 012949 356 DTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVETNVDLRKLMLAGDFINKHLGRPSG 435 (452)
Q Consensus 356 nd~GlA~ANaLaAl~aGa~~VD~Sv~GlGecP~a~graGNaalE~vv~~L~~~Gi~t~iDl~~L~~la~~v~~~~g~~~p 435 (452)
||+|||+||+++|+++||++||+|++|+|+ |+||++||+|+++|+.+|+++++|+++|.+++++++++.+...|
T Consensus 210 nd~GlAvAN~laAv~AGa~~VD~ti~g~ge------rtGN~~lE~lv~~L~~~g~~tgidl~~L~~is~~v~~~~~~~~~ 283 (464)
T 2nx9_A 210 STAGLADMTLLKAIEAGVDRVDTAISSMSG------TYGHPATESLVATLQGTGYDTGLDIAKLEQIAAYFRDVRKKYHA 283 (464)
T ss_dssp CTTSCHHHHHHHHHHTTCSEEEEBCGGGCS------TTSCCBHHHHHHHHTTSTTCCCCCHHHHHHHHHHHHHHHHHTGG
T ss_pred CCCChHHHHHHHHHHhCCCEEEEeccccCC------CCcCHHHHHHHHHHHhcCCCcccCHHHHHHHHHHHHHHHhhccc
Confidence 999999999999999999999999999999 99999999999999999999999999999999999999998777
Q ss_pred CCcccccchhhhhcc
Q 012949 436 SKTAIALNRIAADAS 450 (452)
Q Consensus 436 ~~~pi~G~~vf~h~S 450 (452)
...+.+|.+...+.+
T Consensus 284 ~~~~~~g~~~~v~~~ 298 (464)
T 2nx9_A 284 FEGMMKGSDARILVA 298 (464)
T ss_dssp GCCSCCSCCTHHHHH
T ss_pred ccCCCcCCcCCeEEe
Confidence 776777765544443
No 14
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=100.00 E-value=6.4e-52 Score=421.70 Aligned_cols=276 Identities=22% Similarity=0.290 Sum_probs=242.7
Q ss_pred CCCccEEEeCCccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEe----cC-CCCCcccccCCHHHHHHHHHh-ccCCc
Q 012949 123 IPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEAT----SF-VSPKWVPQLADARDVMEAVRD-LEGAR 196 (452)
Q Consensus 123 ~p~~V~I~D~TLRDG~Q~~~~~~~~~~k~~i~~~L~~~Gv~~IEvG----~~-~s~~~~p~~~D~e~v~~~i~~-~~~~~ 196 (452)
.+++|+|+|||||||+|+++..|++++|++|++.|+++|++.||+| +| ++|++.|++.+.++.++.+++ .++++
T Consensus 5 ~~~~v~i~DttlRDG~Q~~~~~~~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~~~~~~~ 84 (345)
T 1nvm_A 5 PSKKLYISDVTLRDGSHAIRHQYTLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGEISHAQ 84 (345)
T ss_dssp CCCBCEEEECTTTHHHHHTTTCCCHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHTTCSSSE
T ss_pred CCCCcEEEECCCCcccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHhhCCCCE
Confidence 3457999999999999999999999999999999999999999998 76 478888988888888877754 57889
Q ss_pred eeEE-ecchhhhhhhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHH
Q 012949 197 LPVL-TPNLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAH 275 (452)
Q Consensus 197 l~~l-~~~~~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~ 275 (452)
+++| .|+.. ..+++++|.++|++.|+|+++.|+. +.+.++++
T Consensus 85 i~~l~~p~~~-----------------------~~~~i~~a~~aGvd~v~I~~~~s~~--------------~~~~~~i~ 127 (345)
T 1nvm_A 85 IATLLLPGIG-----------------------SVHDLKNAYQAGARVVRVATHCTEA--------------DVSKQHIE 127 (345)
T ss_dssp EEEEECBTTB-----------------------CHHHHHHHHHHTCCEEEEEEETTCG--------------GGGHHHHH
T ss_pred EEEEecCCcc-----------------------cHHHHHHHHhCCcCEEEEEEeccHH--------------HHHHHHHH
Confidence 9888 56432 2358999999999999999999874 44578889
Q ss_pred HHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCC-CccEEEEe
Q 012949 276 AAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVP-VEKLAVHL 354 (452)
Q Consensus 276 ~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p-~~~l~vH~ 354 (452)
+||++|+.+.++++ +.++++++++.++++.+.++|++.|+|+||+|.++|.+++++|+.+++++| .++|++|+
T Consensus 128 ~ak~~G~~v~~~~~------~a~~~~~e~~~~ia~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~pi~~H~ 201 (345)
T 1nvm_A 128 YARNLGMDTVGFLM------MSHMIPAEKLAEQGKLMESYGATCIYMADSGGAMSMNDIRDRMRAFKAVLKPETQVGMHA 201 (345)
T ss_dssp HHHHHTCEEEEEEE------STTSSCHHHHHHHHHHHHHHTCSEEEEECTTCCCCHHHHHHHHHHHHHHSCTTSEEEEEC
T ss_pred HHHHCCCEEEEEEE------eCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCccCHHHHHHHHHHHHHhcCCCceEEEEE
Confidence 99999999997776 346889999999999999999999999999999999999999999999996 78999999
Q ss_pred CCCcCcHHHHHHHHHHcCCCEEeecccCCCCCCCCCCCCCcccHHHHHHHHHcCCCCCCCChhhHHHHHHHHHHH-hCCC
Q 012949 355 HDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVETNVDLRKLMLAGDFINKH-LGRP 433 (452)
Q Consensus 355 Hnd~GlA~ANaLaAl~aGa~~VD~Sv~GlGecP~a~graGNaalE~vv~~L~~~Gi~t~iDl~~L~~la~~v~~~-~g~~ 433 (452)
|||+|||+||+++|+++||++||+|++|||| |+||++||+|+++|+.+|+++++|+++|.++++++++. .+.+
T Consensus 202 Hn~~G~avAn~laA~~aGa~~vd~tv~GlG~------~aGN~~le~lv~~L~~~g~~~~idl~~l~~~~~~~~~~~~~~~ 275 (345)
T 1nvm_A 202 HHNLSLGVANSIVAVEEGCDRVDASLAGMGA------GAGNAPLEVFIAVAERLGWNHGTDLYTLMDAADDIVRPLQDRP 275 (345)
T ss_dssp BCTTSCHHHHHHHHHHTTCCEEEEBGGGCSS------TTCBCBHHHHHHHHHHHTCBCCSCHHHHHHHHHHTTGGGCSSC
T ss_pred CCCccHHHHHHHHHHHcCCCEEEecchhccC------CccCcCHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999 99999999999999999999999999999999999886 3443
Q ss_pred CCCCcccccchhhhhccC
Q 012949 434 SGSKTAIALNRIAADASK 451 (452)
Q Consensus 434 ~p~~~pi~G~~vf~h~Sg 451 (452)
+|+.+...+..-+|
T Consensus 276 ----~~~~~~~~~~~~~G 289 (345)
T 1nvm_A 276 ----VRVDRETLGLGYAG 289 (345)
T ss_dssp ----CSCCHHHHHHHHHT
T ss_pred ----CCCChHHHheeccc
Confidence 34555554443333
No 15
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=100.00 E-value=2.6e-51 Score=413.01 Aligned_cols=272 Identities=18% Similarity=0.137 Sum_probs=231.3
Q ss_pred ccEEEeCCccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcc----cccCCHHHHHHHHHhccCCceeEEe
Q 012949 126 FVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWV----PQLADARDVMEAVRDLEGARLPVLT 201 (452)
Q Consensus 126 ~V~I~D~TLRDG~Q~~~~~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~----p~~~D~e~v~~~i~~~~~~~l~~l~ 201 (452)
+|+|+|||||||.|++++.|++++|++|++.|+++||++||+|||++|++. |++.+ ++.++.+++.+++++++|+
T Consensus 2 ~V~I~DtTlRDG~Qs~~~~~~~~~k~~ia~~L~~aGv~~IEvg~~~~p~~~f~~~~~~~~-~e~l~~i~~~~~~~~~~L~ 80 (320)
T 3dxi_A 2 SLKILDCTLRDGGYYTNWDFNSKIVDAYILAMNELPIDYLEVGYRNKPSKEYMGKFGYTP-VSVLKHLRNISTKKIAIML 80 (320)
T ss_dssp -CEEEECHHHHHGGGGTTCCCHHHHHHHHHHHHTTTCCEEEEEECCSCCSSCCCHHHHCC-HHHHHHHHHHCCSEEEEEE
T ss_pred eEEEEECCcCccccCCCCcCCHHHHHHHHHHHHHhCCCEEEEecccCCccccccccccCh-HHHHHHHhhccCCeEEEEe
Confidence 589999999999999999999999999999999999999999999999875 77765 5677777778899999999
Q ss_pred cchhhhhhhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCC
Q 012949 202 PNLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLS 281 (452)
Q Consensus 202 ~~~~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G 281 (452)
|+.+ .++++ .+.+..+.++|++.|+++....+ ++.+.+++++||++|
T Consensus 81 r~~~----------~~~~d---------v~~~~~a~~~Gvd~~ri~~~~~n--------------le~~~~~v~~ak~~G 127 (320)
T 3dxi_A 81 NEKN----------TTPED---------LNHLLLPIIGLVDMIRIAIDPQN--------------IDRAIVLAKAIKTMG 127 (320)
T ss_dssp EGGG----------CCGGG---------HHHHHGGGTTTCSEEEEEECGGG--------------HHHHHHHHHHHHTTT
T ss_pred cCCC----------CChhh---------HHHHHHhhhcCCCEEEEEecHHH--------------HHHHHHHHHHHHHCC
Confidence 8754 11211 12334446689999999985432 677788999999999
Q ss_pred CcEEEEEEeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcH
Q 012949 282 IPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQS 361 (452)
Q Consensus 282 ~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA 361 (452)
++|+++++++ +|.. +++++...+.+ .++|++.|+|+||+|+++|.+++++|+.+++++| ++|++|+|||+|||
T Consensus 128 ~~v~~~~~~~--~~~~---~~~~~l~~~~~-~~~G~~~i~l~Dt~G~~~P~~~~~lv~~l~~~~~-~~i~~H~Hn~~G~a 200 (320)
T 3dxi_A 128 FEVGFNVMYM--SKWA---EMNGFLSKLKA-IDKIADLFCMVDSFGGITPKEVKNLLKEVRKYTH-VPVGFHGHDNLQLG 200 (320)
T ss_dssp CEEEEEECCT--TTGG---GSTTSGGGGGG-GTTTCSEEEEECTTSCCCHHHHHHHHHHHHHHCC-SCEEEECBCTTSCH
T ss_pred CEEEEEEEeC--CCCC---CHHHHHHHHHH-hhCCCCEEEECcccCCCCHHHHHHHHHHHHHhCC-CeEEEEeCCCCccH
Confidence 9999888863 3332 23333334444 4789999999999999999999999999999997 58999999999999
Q ss_pred HHHHHHHHHcCCCEEeecccCCCCCCCCCCCCCcccHHHHHHHHHcCCCCCCCChhhHHHHHHHHHHHhCCCCCCCcccc
Q 012949 362 LPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVETNVDLRKLMLAGDFINKHLGRPSGSKTAIA 441 (452)
Q Consensus 362 ~ANaLaAl~aGa~~VD~Sv~GlGecP~a~graGNaalE~vv~~L~~~Gi~t~iDl~~L~~la~~v~~~~g~~~p~~~pi~ 441 (452)
+||+++|+++||++||+|++|||+ ++||++||+|+++|+. ++++++|+++|.++.++++++. +++++
T Consensus 201 ~an~laA~~aGa~~vd~si~GlG~------~~GN~~~E~lv~~L~~-~~~~~~dl~~l~~~~~~~~~~~------~~~~~ 267 (320)
T 3dxi_A 201 LINSITAIDDGIDFIDATITGMGR------GAGNLKMELLLTYLNK-HHGLNVDFNVLGNIITTFTPLL------EKYQW 267 (320)
T ss_dssp HHHHHHHHHTTCSEEEEBGGGCSS------TTCBCBHHHHHHHHHH-HSCCCCCHHHHHHHHHHHHHHH------HHHCC
T ss_pred HHHHHHHHHhCCCEEEEeccccCC------cccchhHHHHHHHHHh-ccCCCcCHHHHHHHHHHHHHHH------HhcCC
Confidence 999999999999999999999999 9999999999999998 5667999999999999999986 78899
Q ss_pred cchhhhhccC
Q 012949 442 LNRIAADASK 451 (452)
Q Consensus 442 G~~vf~h~Sg 451 (452)
|.++|.|+||
T Consensus 268 g~~~~~~~sg 277 (320)
T 3dxi_A 268 GTNLPYMLSG 277 (320)
T ss_dssp SCCHHHHHHH
T ss_pred CCchhhHHHh
Confidence 9999988876
No 16
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=100.00 E-value=6.8e-50 Score=438.54 Aligned_cols=309 Identities=17% Similarity=0.156 Sum_probs=261.9
Q ss_pred chhhHHHHHhh--------hcCCCCccEEEeCCccccCCCCCCC-CCHHHHHHHHHHHHHCC--CCEEEEecCCCCC-cc
Q 012949 109 DKDIRDITNKF--------LKGIPRFVKIVEVGPRDGLQNEKNT-VPTGVKVELIRRLVSSG--LPVVEATSFVSPK-WV 176 (452)
Q Consensus 109 ~~~~~~~~~~~--------~~~~p~~V~I~D~TLRDG~Q~~~~~-~~~~~k~~i~~~L~~~G--v~~IEvG~~~s~~-~~ 176 (452)
+...|++..+. +. -+++|+|+|||||||.|+++.. |++++|++|++.|+++| ++.||+|..++-. .+
T Consensus 78 ~~g~r~~l~~~gp~~~~~~~~-~~~~I~I~DTTLRDG~Qs~~~~r~~~edkl~Ia~~Ld~~Gvg~~~IE~gGGatfd~~~ 156 (718)
T 3bg3_A 78 PAGFRDILLREGPEGFARAVR-NHPGLLLMDTTFRDAHQSLLATRVRTHDLKKIAPYVAHNFSKLFSMENWGGATFDVAM 156 (718)
T ss_dssp CCCHHHHHHHHHHHHHHHHHH-HCCSCEEEECTTTHHHHHHSTTCCCHHHHHHHHHHHHHHCTTCSEEEEEETTHHHHHH
T ss_pred CCCHHHHHHHhCHHHHHHHHh-ccCCeEEeecCCChhhCCCCCcCCCHHHHHHHHHHHHHhcCCCcEEEecCCcchhhcc
Confidence 45666665521 22 2457999999999999999865 99999999999999985 6669998111100 00
Q ss_pred ccc-CCHHHHHHHHH-hccCCceeEEecchhhhhhhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHH
Q 012949 177 PQL-ADARDVMEAVR-DLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAF 254 (452)
Q Consensus 177 p~~-~D~e~v~~~i~-~~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~ 254 (452)
|.+ .++++.++.++ .++++++++|++..+ +++|.+++.++++ +++++|+++|++.|+||.+.|+
T Consensus 157 ~f~~e~p~e~l~~l~~~~~~~~l~~l~R~~n-----~vgy~~~p~~~~~-------~~i~~a~~~Gvd~irIf~s~n~-- 222 (718)
T 3bg3_A 157 RFLYECPWRRLQELRELIPNIPFQMLLRGAN-----AVGYTNYPDNVVF-------KFCEVAKENGMDVFRVFDSLNY-- 222 (718)
T ss_dssp HTSCCCHHHHHHHHHHHCSSSCEEEEECGGG-----TTSSSCCCHHHHH-------HHHHHHHHHTCCEEEEECSSCC--
T ss_pred ccCCCCHHHHHHHHHHHcccchHHHHhcccc-----cccccccCCcchH-------HHHHHHHhcCcCEEEEEecHHH--
Confidence 001 24555555554 568889998887654 6788888877654 4999999999999999999876
Q ss_pred HhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEee--ecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHH
Q 012949 255 SKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCV--VGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPG 332 (452)
Q Consensus 255 ~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~--~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~ 332 (452)
+++++..++++++.|..|+++++++ |.+|..+.++++++.++++++.++||++|+|+||+|+++|.
T Consensus 223 ------------l~~l~~~i~~ak~~G~~v~~~i~~~~d~~dp~r~~~~~e~~~~~a~~l~~~Ga~~I~l~DT~G~~~P~ 290 (718)
T 3bg3_A 223 ------------LPNMLLGMEAAGSAGGVVEAAISYTGDVADPSRTKYSLQYYMGLAEELVRAGTHILCIKDMAGLLKPT 290 (718)
T ss_dssp ------------HHHHHHHHHHHHTTTSEEEEEEECCSCTTCTTCCTTCHHHHHHHHHHHHHHTCSEEEEECTTSCCCHH
T ss_pred ------------HHHHHHHHHHHHHcCCeEEEEEEeeccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCcCCCcCHH
Confidence 3677889999999999999999986 34555455699999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEeecccCCCCCCCCCCCCCcccHHHHHHHHHcCCCCC
Q 012949 333 TVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVET 412 (452)
Q Consensus 333 ~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~Sv~GlGecP~a~graGNaalE~vv~~L~~~Gi~t 412 (452)
+++++|+.+++++|+++|++|+|||+|||+||+++|+++||++||+|++|||| |+||++||+|+++|+.+|+++
T Consensus 291 ~v~~lV~~lk~~~p~~~I~~H~Hnd~GlAvANslaAveAGa~~VD~ti~GlGe------rtGN~~lE~vv~~L~~~g~~t 364 (718)
T 3bg3_A 291 ACTMLVSSLRDRFPDLPLHIHTHDTSGAGVAAMLACAQAGADVVDVAADSMSG------MTSQPSMGALVACTRGTPLDT 364 (718)
T ss_dssp HHHHHHHHHHHHSTTCCEEEECCCTTSCHHHHHHHHHHTTCSEEEEBCGGGCS------TTSCCBHHHHHHHHTTSTTCC
T ss_pred HHHHHHHHHHHhCCCCeEEEEECCCccHHHHHHHHHHHhCCCEEEecCccccc------ccCchhHHHHHHHHHhcCCCc
Confidence 99999999999998889999999999999999999999999999999999999 999999999999999999999
Q ss_pred CCChhhHHHHHHHHHHHhCCCCCCC--cccccc--hhhhhcc
Q 012949 413 NVDLRKLMLAGDFINKHLGRPSGSK--TAIALN--RIAADAS 450 (452)
Q Consensus 413 ~iDl~~L~~la~~v~~~~g~~~p~~--~pi~G~--~vf~h~S 450 (452)
++|+++|.+++++++++.+.+.|.+ .+++|. ++|.|+.
T Consensus 365 gidl~~L~~~s~~v~~~~~~~~~~~~~~~~~g~~~~v~~~e~ 406 (718)
T 3bg3_A 365 EVPMERVFDYSEYWEGARGLYAAFDCTATMKSGNSDVYENEI 406 (718)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTGGGCGGGTCCSCCTTHHHHCC
T ss_pred ccCHHHHHHHHHHHHHHhCCCcCCcCCccccccccceeeccC
Confidence 9999999999999999999999988 899987 6777764
No 17
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=100.00 E-value=1.4e-46 Score=432.43 Aligned_cols=291 Identities=15% Similarity=0.157 Sum_probs=250.6
Q ss_pred CCccEEEeCCccccCCCCCC-CCCHHHHHHHHHHHHHCCCC--EEEE----ecCCCCCcccccCCHHHHHHHHH-hccCC
Q 012949 124 PRFVKIVEVGPRDGLQNEKN-TVPTGVKVELIRRLVSSGLP--VVEA----TSFVSPKWVPQLADARDVMEAVR-DLEGA 195 (452)
Q Consensus 124 p~~V~I~D~TLRDG~Q~~~~-~~~~~~k~~i~~~L~~~Gv~--~IEv----G~~~s~~~~p~~~D~e~v~~~i~-~~~~~ 195 (452)
+++|+|+|||||||.|+++. .|++++|++|++.|+++|++ .||+ ||++...+. -.++++.++.++ .++++
T Consensus 548 ~~~v~i~DtTLRDG~Qs~~~~~~~~~dkl~ia~~L~~~gv~~~~iE~~gga~f~~~~~f~--~~~p~e~l~~~~~~~~~~ 625 (1165)
T 2qf7_A 548 EKRVLLTDTTMRDGHQSLLATRMRTYDIARIAGTYSHALPNLLSLECWGGATFDVSMRFL--TEDPWERLALIREGAPNL 625 (1165)
T ss_dssp CSSCEEEECTTTHHHHHHHTTCCCHHHHHHHHHHHHHHCTTCSEEEEEETTHHHHHHHHH--CCCHHHHHHHHHHHCTTS
T ss_pred CCceEEEecccccccccCCcccCCHHHHHHHHHHHHHhCCCceEEEeCCCCccHHHHhhc--CCCHHHHHHHHHHHchhh
Confidence 35799999999999999986 59999999999999999655 5998 343211100 135556566554 56888
Q ss_pred ceeEEecchhhhhhhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHH
Q 012949 196 RLPVLTPNLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAH 275 (452)
Q Consensus 196 ~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~ 275 (452)
++++|+++.+ +++|.+++.++++ +++++|+++|++.|+||.+.|+ ++++..+++
T Consensus 626 ~~~~l~R~~n-----~vg~~~~~~~~~~-------~~i~~a~~~g~d~irif~sl~~--------------~~~~~~~i~ 679 (1165)
T 2qf7_A 626 LLQMLLRGAN-----GVGYTNYPDNVVK-------YFVRQAAKGGIDLFRVFDCLNW--------------VENMRVSMD 679 (1165)
T ss_dssp EEEEEEETTT-----BTCSSCCCHHHHH-------HHHHHHHHHTCCEEEEECTTCC--------------GGGGHHHHH
T ss_pred HHHHHhcccc-----ccccccCCchhHH-------HHHHHHHhcCcCEEEEEeeHHH--------------HHHHHHHHH
Confidence 9999987655 7789888877655 4999999999999999999876 356778899
Q ss_pred HHHhCCCcEEEEEEee--ecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEE
Q 012949 276 AAKVLSIPVRGYVSCV--VGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVH 353 (452)
Q Consensus 276 ~Ak~~G~~V~~~l~~~--~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH 353 (452)
++|+.|..|+++++++ |.+|..+.++++++.++++++.++||++|+|+||+|+++|.+++++|+.+++++ +++|++|
T Consensus 680 ~~~~~g~~v~~~i~~~~~~~d~~r~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~-~~~i~~H 758 (1165)
T 2qf7_A 680 AIAEENKLCEAAICYTGDILNSARPKYDLKYYTNLAVELEKAGAHIIAVKDMAGLLKPAAAKVLFKALREAT-GLPIHFH 758 (1165)
T ss_dssp HHHHTTCEEEEEEECCSCTTCTTSGGGCHHHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHC-SSCEEEE
T ss_pred HHHhccceEEEEEEEeccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCccCCcCHHHHHHHHHHHHHhc-CCeEEEE
Confidence 9999999999999986 334443448999999999999999999999999999999999999999999999 5689999
Q ss_pred eCCCcCcHHHHHHHHHHcCCCEEeecccCCCCCCCCCCCCCcccHHHHHHHHHcCCCCCCCChhhHHHHHHHHHHHhCCC
Q 012949 354 LHDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVETNVDLRKLMLAGDFINKHLGRP 433 (452)
Q Consensus 354 ~Hnd~GlA~ANaLaAl~aGa~~VD~Sv~GlGecP~a~graGNaalE~vv~~L~~~Gi~t~iDl~~L~~la~~v~~~~g~~ 433 (452)
+|||+|||+||+++|+++||++||+|++|||| |+||++||+|+++|+.+|+++++|+++|.+++++++++.+..
T Consensus 759 ~Hnd~GlAvAn~laAv~aGa~~vd~ti~GlGe------~~Gn~~le~vv~~L~~~g~~tgidl~~L~~~s~~~~~~~~~~ 832 (1165)
T 2qf7_A 759 THDTSGIAAATVLAAVEAGVDAVDAAMDALSG------NTSQPCLGSIVEALSGSERDPGLDPAWIRRISFYWEAVRNQY 832 (1165)
T ss_dssp ECBTTSCHHHHHHHHHHTTCSEEEEBCGGGCS------BTSCCBHHHHHHHHTTSTTCCCCCHHHHHHHHHHHHHHHGGG
T ss_pred ECCCCCHHHHHHHHHHHhCCCEEEecccccCC------CccchhHHHHHHHHHhcCCCccccHHHHHHHHHHHHHHhhhc
Confidence 99999999999999999999999999999999 999999999999999999999999999999999999999988
Q ss_pred CCCCcccccc--hhhhhc
Q 012949 434 SGSKTAIALN--RIAADA 449 (452)
Q Consensus 434 ~p~~~pi~G~--~vf~h~ 449 (452)
.|...+++|. +++.|+
T Consensus 833 ~~~~~~~~~~~~~v~~~~ 850 (1165)
T 2qf7_A 833 AAFESDLKGPASEVYLHE 850 (1165)
T ss_dssp GGGCCCCCSCCTTHHHHC
T ss_pred cCCCCCccCCccceEecc
Confidence 8877788884 456665
No 18
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=100.00 E-value=1.7e-45 Score=422.79 Aligned_cols=293 Identities=16% Similarity=0.173 Sum_probs=257.0
Q ss_pred CCccEEEeCCccccCCCCCCC-CCHHHHHHHHHHHHHC--CCCEEEEec-CCCCCccccc-CCHHHHHHHHHh-ccCCce
Q 012949 124 PRFVKIVEVGPRDGLQNEKNT-VPTGVKVELIRRLVSS--GLPVVEATS-FVSPKWVPQL-ADARDVMEAVRD-LEGARL 197 (452)
Q Consensus 124 p~~V~I~D~TLRDG~Q~~~~~-~~~~~k~~i~~~L~~~--Gv~~IEvG~-~~s~~~~p~~-~D~e~v~~~i~~-~~~~~l 197 (452)
+++|+|+|||||||.|++++. |++++|++|++.|+++ |+..||.+. ..-.-.+|.+ .|+++.++.+++ ++++++
T Consensus 530 ~~~v~I~DtTlRDG~Qs~~~~r~~~~~kl~ia~~L~~~~~G~~~lE~~Gga~~e~~~~~~~e~~~e~l~~l~~~~~~~~~ 609 (1150)
T 3hbl_A 530 QDDVLLTDTTFRDAHQSLLATRVRTKDMINIASKTADVFKDGFSLEMWGGATFDVAYNFLKENPWERLERLRKAIPNVLF 609 (1150)
T ss_dssp CSSBEEEECTTTHHHHHHSTTCCCHHHHHHHHHHHHHHTTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHHCCSSEE
T ss_pred CCceEEEECccchhhccCCCcCCCHHHHHHHHHHHHHhhCCCcEEeecCCceEEecccccCCCHHHHHHHHHHhCCCCeE
Confidence 457999999999999999986 9999999999999999 999999942 1100023444 477777777764 688999
Q ss_pred eEEecchhhhhhhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHH
Q 012949 198 PVLTPNLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAA 277 (452)
Q Consensus 198 ~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~A 277 (452)
++|+++.+ .++|..+++++++. ++++|+++|++.|++|+++||+|+. ..+++.+
T Consensus 610 ~~l~R~~n-----~vgy~~~pd~v~~~-------~v~~a~~~Gvd~irif~~~sd~~~~--------------~~~~~~~ 663 (1150)
T 3hbl_A 610 QMLLRASN-----AVGYKNYPDNVIHK-------FVQESAKAGIDVFRIFDSLNWVDQM--------------KVANEAV 663 (1150)
T ss_dssp EEEEETTT-----BTCSSCCCHHHHHH-------HHHHHHHTTCCEEEEECTTCCGGGG--------------HHHHHHH
T ss_pred EEEecccc-----ccccccCCchhHHH-------HHHHHHhCCcCEEEEEeeCCHHHHH--------------HHHHHHH
Confidence 99997765 77899999988764 8999999999999999999998654 4566788
Q ss_pred HhCCCcEEEEEEee---ecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEe
Q 012949 278 KVLSIPVRGYVSCV---VGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHL 354 (452)
Q Consensus 278 k~~G~~V~~~l~~~---~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~ 354 (452)
++.|..+.+.++++ ++.++.++++++++.++++++.++||++|+|+||+|+++|.+++++|+.+++++ +++|++|+
T Consensus 664 ~e~g~~~~~~i~~~~~~~~pe~~~~~~~~~~~~~a~~~~~~Ga~~i~l~Dt~G~~~P~~~~~lv~~l~~~~-~~~i~~H~ 742 (1150)
T 3hbl_A 664 QEAGKISEGTICYTGDILNPERSNIYTLEYYVKLAKELEREGFHILAIKDMAGLLKPKAAYELIGELKSAV-DLPIHLHT 742 (1150)
T ss_dssp HHTTCEEEEEEECCSCTTCTTTCSSSSHHHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHC-CSCEEEEE
T ss_pred HHHhhheeEEEeecccccChhhcCCCCHHHHHHHHHHHHHcCCCeeeEcCccCCCCHHHHHHHHHHHHHhc-CCeEEEEe
Confidence 88999999999998 766667889999999999999999999999999999999999999999999997 56899999
Q ss_pred CCCcCcHHHHHHHHHHcCCCEEeecccCCCCCCCCCCCCCcccHHHHHHHHHcCCCCCCCChhhHHHHHHHHHHHhCCCC
Q 012949 355 HDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVETNVDLRKLMLAGDFINKHLGRPS 434 (452)
Q Consensus 355 Hnd~GlA~ANaLaAl~aGa~~VD~Sv~GlGecP~a~graGNaalE~vv~~L~~~Gi~t~iDl~~L~~la~~v~~~~g~~~ 434 (452)
|||+|||+||+++|+++||++||+|++|||| |+||++||+|+++|+.+|+++++|+++|.+++++++++.+...
T Consensus 743 Hnt~G~a~An~laA~~aGa~~vD~ai~GlG~------~~gn~~lE~lv~~L~~~g~~tgidl~~l~~~~~~~~~~~~~y~ 816 (1150)
T 3hbl_A 743 HDTSGNGLLTYKQAIDAGVDIIDTAVASMSG------LTSQPSANSLYYALNGFPRHLRTDIEGMESLSHYWSTVRTYYS 816 (1150)
T ss_dssp CBTTSCHHHHHHHHHHTTCSEEEEBCGGGCS------BTSCCBHHHHHHHTTTSSCCBCSCHHHHHHHHHHHHHHHGGGG
T ss_pred CCCCcHHHHHHHHHHHhCCCEEEEeccccCC------CCCCccHHHHHHHHHhcCCCcCccHHHHHHHHHHHHHHHhhhc
Confidence 9999999999999999999999999999999 9999999999999999999999999999999999999988766
Q ss_pred CCCcccccc--hhhhhc
Q 012949 435 GSKTAIALN--RIAADA 449 (452)
Q Consensus 435 p~~~pi~G~--~vf~h~ 449 (452)
+...++.|. +++.|+
T Consensus 817 ~~~~~~~~~~~~v~~~~ 833 (1150)
T 3hbl_A 817 DFESDIKSPNTEIYQHE 833 (1150)
T ss_dssp GGCCSCCSCCTTHHHHC
T ss_pred cccCCCCCCccceEEee
Confidence 666666654 467664
No 19
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=98.65 E-value=5.7e-07 Score=87.61 Aligned_cols=185 Identities=12% Similarity=0.107 Sum_probs=111.5
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecCCC-CCc-ccccC-----------CHHHHHHHHHhc---c-CCceeEEecchhh
Q 012949 144 TVPTGVKVELIRRLVSSGLPVVEATSFVS-PKW-VPQLA-----------DARDVMEAVRDL---E-GARLPVLTPNLKV 206 (452)
Q Consensus 144 ~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s-~~~-~p~~~-----------D~e~v~~~i~~~---~-~~~l~~l~~~~~~ 206 (452)
..+.+..+++++.|.+.|+|.||+|.|.+ |.. .|... ..+.+++.++++ . ++.+..+..
T Consensus 27 ~p~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pi~~m~y---- 102 (262)
T 2ekc_A 27 YPDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFLLMTY---- 102 (262)
T ss_dssp SSCHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEECC----
T ss_pred CCChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCEEEEec----
Confidence 46779999999999999999999998753 310 01100 112222333322 1 333322211
Q ss_pred hhhhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEE
Q 012949 207 ILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRG 286 (452)
Q Consensus 207 ~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~ 286 (452)
|.+.. +....+.++.+.++|++.+.+..- . ++.+.+.++.++++|+.+..
T Consensus 103 -------~n~v~-------~~g~~~f~~~~~~aG~dgvii~dl------------~----~ee~~~~~~~~~~~gl~~i~ 152 (262)
T 2ekc_A 103 -------YNPIF-------RIGLEKFCRLSREKGIDGFIVPDL------------P----PEEAEELKAVMKKYVLSFVP 152 (262)
T ss_dssp -------HHHHH-------HHCHHHHHHHHHHTTCCEEECTTC------------C----HHHHHHHHHHHHHTTCEECC
T ss_pred -------CcHHH-------HhhHHHHHHHHHHcCCCEEEECCC------------C----HHHHHHHHHHHHHcCCcEEE
Confidence 11000 001134788999999998776421 1 24456778999999987531
Q ss_pred EEEeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHH---HHHHHHHHHHhCCCccEEEEeCCCcCcHHH
Q 012949 287 YVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGT---VVPMLEAVMAVVPVEKLAVHLHDTYGQSLP 363 (452)
Q Consensus 287 ~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~---v~~li~~l~~~~p~~~l~vH~Hnd~GlA~A 363 (452)
+. .| .++.+.+.++++..... +..+.+.+++|..+|.. +.++++.+++.. +.+|.+ .+|...+
T Consensus 153 -l~----~p---~t~~~rl~~ia~~a~gf-iy~vs~~g~TG~~~~~~~~~~~~~v~~vr~~~-~~pv~v----G~GI~t~ 218 (262)
T 2ekc_A 153 -LG----AP---TSTRKRIKLICEAADEM-TYFVSVTGTTGAREKLPYERIKKKVEEYRELC-DKPVVV----GFGVSKK 218 (262)
T ss_dssp -EE----CT---TCCHHHHHHHHHHCSSC-EEEESSCC---------CHHHHHHHHHHHHHC-CSCEEE----ESSCCSH
T ss_pred -Ee----CC---CCCHHHHHHHHHhCCCC-EEEEecCCccCCCCCcCcccHHHHHHHHHhhc-CCCEEE----eCCCCCH
Confidence 11 22 24567777777765432 45667779999998855 889999999976 457777 8999989
Q ss_pred HHHHHHHcCCCEE
Q 012949 364 NILISLQMGISTV 376 (452)
Q Consensus 364 NaLaAl~aGa~~V 376 (452)
+.++++.+|||.|
T Consensus 219 e~~~~~~~gADgv 231 (262)
T 2ekc_A 219 EHAREIGSFADGV 231 (262)
T ss_dssp HHHHHHHTTSSEE
T ss_pred HHHHHHHcCCCEE
Confidence 9999999998754
No 20
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=98.59 E-value=2.4e-06 Score=85.77 Aligned_cols=229 Identities=14% Similarity=0.138 Sum_probs=149.2
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEecchhhhhhhhhhhhhccchhhh
Q 012949 144 TVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVIS 223 (452)
Q Consensus 144 ~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~ 223 (452)
.++.++.++.++.+.+.|++.|-++....|.+.+...+..++++.+++..+..+. +.++..
T Consensus 90 ~ls~eei~~~~~~~~~~G~~~i~l~gGe~p~~~~~~~~~~~l~~~ik~~~~i~i~-~s~g~~------------------ 150 (350)
T 3t7v_A 90 RLTMEEIKETCKTLKGAGFHMVDLTMGEDPYYYEDPNRFVELVQIVKEELGLPIM-ISPGLM------------------ 150 (350)
T ss_dssp BCCHHHHHHHHHHHTTSCCSEEEEEECCCHHHHHSTHHHHHHHHHHHHHHCSCEE-EECSSC------------------
T ss_pred eCCHHHHHHHHHHHHHCCCCEEEEeeCCCCccccCHHHHHHHHHHHHhhcCceEE-EeCCCC------------------
Confidence 4799999999999999999998886544342211111223444444432233332 223211
Q ss_pred hhhhccHHhHHHHHHcCCCEEEEEecCC-h-HHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCC
Q 012949 224 SNLWVYLQGFEAAIAAGAKEVAIFASAS-E-AFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIP 301 (452)
Q Consensus 224 ~~~~~~~~~ie~a~~~Gi~~V~i~~s~S-d-~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d 301 (452)
..+.++..+++|++.+.+..-.. + .+.+..-+.+.+ ...++++.+++.|+++...++ +|. . -+
T Consensus 151 -----~~e~l~~L~~aG~~~i~i~lEt~~~~~~~~i~~~~~~~----~~l~~i~~a~~~Gi~v~~~~i--~Gl-g---et 215 (350)
T 3t7v_A 151 -----DNATLLKAREKGANFLALYQETYDTELYRKLRVGQSFD----GRVNARRFAKQQGYCVEDGIL--TGV-G---ND 215 (350)
T ss_dssp -----CHHHHHHHHHTTEEEEECCCBCSCHHHHHHHSTTCCHH----HHHHHHHHHHHHTCEEEEEEE--ESS-S---CC
T ss_pred -----CHHHHHHHHHcCCCEEEEeeecCCHHHHHHhCCCCCHH----HHHHHHHHHHHcCCeEccceE--eec-C---CC
Confidence 23578899999999888765443 3 332222344544 444667899999999887666 443 1 25
Q ss_pred HHHHHHHHHHHHHCCcCEEEE------cCCc----CCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHc
Q 012949 302 PSKVAYVAKELHDMGCFEISL------GDTI----GVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQM 371 (452)
Q Consensus 302 ~e~l~~~a~~l~~~Gad~I~L------~DT~----G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~a 371 (452)
++.+.+.++.+.+.+++.+.+ ++|- ...++.++.++++..|-.+|...|-.-.+ -++......|+.+
T Consensus 216 ~e~~~~~l~~l~~l~~~~v~~~~f~p~~gT~l~~~~~~~~~e~l~~ia~~Rl~lp~~~I~a~~~---~~g~~~~~~~l~~ 292 (350)
T 3t7v_A 216 IESTILSLRGMSTNDPDMVRVMTFLPQEGTPLEGFRDKSNLSELKIISVLRLMFPKRLIPASLD---LEGIDGMVLRLNA 292 (350)
T ss_dssp HHHHHHHHHHHHHTCCSEEEEEECCCCTTSTTTTCCCCCCCCHHHHHHHHHHHSTTSBCEEEHH---HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCCEEEecceeeCCCCcCccCCCCChHHHHHHHHHHHHhCCCcCcccccc---ccChhHHHHHHhc
Confidence 788889999999999987765 2331 22456778888888888888754443222 3344678899999
Q ss_pred CCCEEeecccCCCCCCCCCCCC--------CcccHHHHHHHHHcCCCCC
Q 012949 372 GISTVDCSVAGLGGCPYAKGAS--------GNVATEDVVYMLSGLGVET 412 (452)
Q Consensus 372 Ga~~VD~Sv~GlGecP~a~gra--------GNaalE~vv~~L~~~Gi~t 412 (452)
||+.+.+++..-- .+.|.. ++.+.++++..++..|+.+
T Consensus 293 Gan~~~~~~~~~~---~~ag~~~~~~~~~~~~~~~~~~~~~i~~~G~~~ 338 (350)
T 3t7v_A 293 GANIVTSILPPDS---QLEGVANYDRDLEERDRDIKSVVRRLEIMGMKP 338 (350)
T ss_dssp TCCEEEEECCSSC---CCCCSSCTTTTCSSCCCCHHHHHHHHHHHTCEE
T ss_pred CCceecCCCCCCC---CCCCCCCCcccchhccCCHHHHHHHHHHcCCcc
Confidence 9999999988651 222211 3578999999999888754
No 21
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=98.23 E-value=1.2e-05 Score=78.76 Aligned_cols=184 Identities=16% Similarity=0.170 Sum_probs=112.2
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecCCC-CC-cccccC-----------CHHHHHHHHHhc----cCCceeEEe-cchh
Q 012949 144 TVPTGVKVELIRRLVSSGLPVVEATSFVS-PK-WVPQLA-----------DARDVMEAVRDL----EGARLPVLT-PNLK 205 (452)
Q Consensus 144 ~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s-~~-~~p~~~-----------D~e~v~~~i~~~----~~~~l~~l~-~~~~ 205 (452)
..+.+.-+++++.|.+.|+|.||+|.|-| |. --|... ..+++++.++++ .++.+..|+ -|.
T Consensus 30 dP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~- 108 (271)
T 3nav_A 30 DPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIGLLMYANL- 108 (271)
T ss_dssp SSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEEECHHH-
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcH-
Confidence 35788899999999999999999998743 31 011111 112444555433 233333232 110
Q ss_pred hhhhhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEE
Q 012949 206 VILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVR 285 (452)
Q Consensus 206 ~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~ 285 (452)
+ | +....+.++.+.++|++.+.+.+-. . +...+..++++++|+.+.
T Consensus 109 --v-----~-----------~~g~~~f~~~~~~aGvdGvIipDlp------------~----ee~~~~~~~~~~~gl~~I 154 (271)
T 3nav_A 109 --V-----Y-----------ARGIDDFYQRCQKAGVDSVLIADVP------------T----NESQPFVAAAEKFGIQPI 154 (271)
T ss_dssp --H-----H-----------HTCHHHHHHHHHHHTCCEEEETTSC------------G----GGCHHHHHHHHHTTCEEE
T ss_pred --H-----H-----------HHhHHHHHHHHHHCCCCEEEECCCC------------H----HHHHHHHHHHHHcCCeEE
Confidence 0 0 0112347899999999998885321 1 224577899999999853
Q ss_pred EEEEeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCc--HHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHH
Q 012949 286 GYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGT--PGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLP 363 (452)
Q Consensus 286 ~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~--P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~A 363 (452)
. ++ +..++.+.+.++++..... +..+.+.+++|... |..+.++++.+|+... .|+.+ .+|....
T Consensus 155 ~-lv-------ap~t~~eri~~i~~~~~gf-iY~vs~~GvTG~~~~~~~~~~~~v~~vr~~~~-~Pv~v----GfGIst~ 220 (271)
T 3nav_A 155 F-IA-------PPTASDETLRAVAQLGKGY-TYLLSRAGVTGAETKANMPVHALLERLQQFDA-PPALL----GFGISEP 220 (271)
T ss_dssp E-EE-------CTTCCHHHHHHHHHHCCSC-EEECCCC--------CCHHHHHHHHHHHHTTC-CCEEE----CSSCCSH
T ss_pred E-EE-------CCCCCHHHHHHHHHHCCCe-EEEEeccCCCCcccCCchhHHHHHHHHHHhcC-CCEEE----ECCCCCH
Confidence 1 22 1224567777666653322 44555678888764 7789999999998764 46777 7888777
Q ss_pred HHHH-HHHcCCCEE
Q 012949 364 NILI-SLQMGISTV 376 (452)
Q Consensus 364 NaLa-Al~aGa~~V 376 (452)
.... ++.+|||.|
T Consensus 221 e~~~~~~~~gADgv 234 (271)
T 3nav_A 221 AQVKQAIEAGAAGA 234 (271)
T ss_dssp HHHHHHHHTTCSEE
T ss_pred HHHHHHHHcCCCEE
Confidence 7777 999999855
No 22
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=98.14 E-value=1.7e-05 Score=77.63 Aligned_cols=185 Identities=15% Similarity=0.161 Sum_probs=110.8
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecCCC-CC-cccccC-----------CHHHHHHHHHhc----cCCceeEEecchhh
Q 012949 144 TVPTGVKVELIRRLVSSGLPVVEATSFVS-PK-WVPQLA-----------DARDVMEAVRDL----EGARLPVLTPNLKV 206 (452)
Q Consensus 144 ~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s-~~-~~p~~~-----------D~e~v~~~i~~~----~~~~l~~l~~~~~~ 206 (452)
..+.+.-.++++.|.+.|+|.||+|.|-| |- -.|... +.+.+++.++++ .++.+..|+-
T Consensus 28 dP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y---- 103 (267)
T 3vnd_A 28 DPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLY---- 103 (267)
T ss_dssp SSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEEC----
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEec----
Confidence 46788899999999999999999997643 31 001111 112334444432 2333222221
Q ss_pred hhhhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEE
Q 012949 207 ILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRG 286 (452)
Q Consensus 207 ~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~ 286 (452)
|.+ + ++....+.++.++++|++.+.+.+-. ++...+.+++++++|+++..
T Consensus 104 -------~np----v---~~~g~e~f~~~~~~aGvdgvii~Dlp----------------~ee~~~~~~~~~~~gl~~i~ 153 (267)
T 3vnd_A 104 -------ANL----V---FANGIDEFYTKAQAAGVDSVLIADVP----------------VEESAPFSKAAKAHGIAPIF 153 (267)
T ss_dssp -------HHH----H---HHHCHHHHHHHHHHHTCCEEEETTSC----------------GGGCHHHHHHHHHTTCEEEC
T ss_pred -------CcH----H---HHhhHHHHHHHHHHcCCCEEEeCCCC----------------HhhHHHHHHHHHHcCCeEEE
Confidence 010 0 00112347889999999998885422 12345778999999998642
Q ss_pred EEEeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCc--HHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHH
Q 012949 287 YVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGT--PGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPN 364 (452)
Q Consensus 287 ~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~--P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~AN 364 (452)
+. +-.++.+.+.++++..... +..+.+..++|... |..+.++++.+|+... .|+.+ .+|.....
T Consensus 154 -li-------aP~t~~eri~~i~~~~~gf-vY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~~-~pv~v----GfGI~~~e 219 (267)
T 3vnd_A 154 -IA-------PPNADADTLKMVSEQGEGY-TYLLSRAGVTGTESKAGEPIENILTQLAEFNA-PPPLL----GFGIAEPE 219 (267)
T ss_dssp -EE-------CTTCCHHHHHHHHHHCCSC-EEESCCCCCC--------CHHHHHHHHHTTTC-CCEEE----CSSCCSHH
T ss_pred -EE-------CCCCCHHHHHHHHHhCCCc-EEEEecCCCCCCccCCcHHHHHHHHHHHHhcC-CCEEE----ECCcCCHH
Confidence 11 1223566666666543222 34445577778764 6778999999998754 46777 78888677
Q ss_pred HHH-HHHcCCCEE
Q 012949 365 ILI-SLQMGISTV 376 (452)
Q Consensus 365 aLa-Al~aGa~~V 376 (452)
... ++.+|||.|
T Consensus 220 ~~~~~~~~gADgv 232 (267)
T 3vnd_A 220 QVRAAIKAGAAGA 232 (267)
T ss_dssp HHHHHHHTTCSEE
T ss_pred HHHHHHHcCCCEE
Confidence 777 999999855
No 23
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=98.11 E-value=3e-05 Score=75.53 Aligned_cols=181 Identities=14% Similarity=0.097 Sum_probs=110.7
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHH--------------------HHHHHHHhc-cCCceeEEec
Q 012949 144 TVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADAR--------------------DVMEAVRDL-EGARLPVLTP 202 (452)
Q Consensus 144 ~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e--------------------~v~~~i~~~-~~~~l~~l~~ 202 (452)
.++.+...++++.|.+.|+|.||+|.|.+. |. .|.. ++++.+++. .++.+..++-
T Consensus 27 dp~~~~~~~~~~~l~~~GaD~ieig~P~sd---p~-~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~lm~y 102 (268)
T 1qop_A 27 DPGIEQSLKIIDTLIDAGADALELGVPFSD---PL-ADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGLLMY 102 (268)
T ss_dssp SSCHHHHHHHHHHHHHTTCSSEEEECCCSC---CT-TCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEEEEC
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCCCCC---cc-CCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEEc
Confidence 567889999999999999999999986532 11 1211 223333332 3333222220
Q ss_pred chhhhhhhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCC
Q 012949 203 NLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSI 282 (452)
Q Consensus 203 ~~~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~ 282 (452)
|.+. ++....+.++.+.++|++.|.+..-.. +.+.+.++.+|++|+
T Consensus 103 -----------~n~v-------~~~g~~~~~~~~~~aGadgii~~d~~~----------------e~~~~~~~~~~~~g~ 148 (268)
T 1qop_A 103 -----------ANLV-------FNNGIDAFYARCEQVGVDSVLVADVPV----------------EESAPFRQAALRHNI 148 (268)
T ss_dssp -----------HHHH-------HTTCHHHHHHHHHHHTCCEEEETTCCG----------------GGCHHHHHHHHHTTC
T ss_pred -----------ccHH-------HHhhHHHHHHHHHHcCCCEEEEcCCCH----------------HHHHHHHHHHHHcCC
Confidence 1110 001123588999999999877753221 334567789999998
Q ss_pred cEEEEEEeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcH--HHHHHHHHHHHHhCCCccEEEEeCCCcCc
Q 012949 283 PVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTP--GTVVPMLEAVMAVVPVEKLAVHLHDTYGQ 360 (452)
Q Consensus 283 ~V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P--~~v~~li~~l~~~~p~~~l~vH~Hnd~Gl 360 (452)
++.. ++ .|. ++.+.+..+++..... +..+.+..++|..+| ..+.++++.+++.. +.+|.+ +.|.
T Consensus 149 ~~i~-l~----~p~---t~~~~i~~i~~~~~g~-v~~~s~~G~tG~~~~~~~~~~~~i~~lr~~~-~~pi~v----ggGI 214 (268)
T 1qop_A 149 APIF-IC----PPN---ADDDLLRQVASYGRGY-TYLLSRSGVTGAENRGALPLHHLIEKLKEYH-AAPALQ----GFGI 214 (268)
T ss_dssp EEEC-EE----CTT---CCHHHHHHHHHHCCSC-EEEESSSSCCCSSSCC--CCHHHHHHHHHTT-CCCEEE----ESSC
T ss_pred cEEE-EE----CCC---CCHHHHHHHHhhCCCc-EEEEecCCcCCCccCCCchHHHHHHHHHhcc-CCcEEE----ECCC
Confidence 7531 11 222 4567777776654322 334455678888544 55778889998865 456777 8888
Q ss_pred HHHHHHHH-HHcCCCEE
Q 012949 361 SLPNILIS-LQMGISTV 376 (452)
Q Consensus 361 A~ANaLaA-l~aGa~~V 376 (452)
..++.+.. +.+|||.|
T Consensus 215 ~t~e~~~~~~~agAD~v 231 (268)
T 1qop_A 215 SSPEQVSAAVRAGAAGA 231 (268)
T ss_dssp CSHHHHHHHHHTTCSEE
T ss_pred CCHHHHHHHHHcCCCEE
Confidence 85555544 99999854
No 24
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=98.07 E-value=1.1e-05 Score=74.84 Aligned_cols=173 Identities=14% Similarity=0.143 Sum_probs=108.0
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhc-cCCceeEEecchhhhhhhhhhhhhccchhh
Q 012949 144 TVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDL-EGARLPVLTPNLKVILQRSILFQQCHASVI 222 (452)
Q Consensus 144 ~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~-~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i 222 (452)
..+.++.+++++.|. -|++.||+|++-+ +....+.++.+++. ++..+.+ ++. +.+.
T Consensus 9 ~~~~~~~~~~~~~~~-~~~diie~G~p~~------~~~g~~~i~~ir~~~~~~~i~~---~~~--------~~~~----- 65 (211)
T 3f4w_A 9 ELTLPEAMVFMDKVV-DDVDIIEVGTPFL------IREGVNAIKAIKEKYPHKEVLA---DAK--------IMDG----- 65 (211)
T ss_dssp SCCHHHHHHHHHHHG-GGCSEEEECHHHH------HHHTTHHHHHHHHHCTTSEEEE---EEE--------ECSC-----
T ss_pred CCCHHHHHHHHHHhh-cCccEEEeCcHHH------HhccHHHHHHHHHhCCCCEEEE---EEE--------eccc-----
Confidence 357889999999996 6999999997321 11112456667654 4443321 111 0000
Q ss_pred hhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCH
Q 012949 223 SSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPP 302 (452)
Q Consensus 223 ~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~ 302 (452)
....++.++++|++.|.+.....+ +.+.+++++++++|+++.+.+. +| .+
T Consensus 66 ------~~~~~~~~~~~Gad~v~v~~~~~~---------------~~~~~~~~~~~~~g~~~~v~~~----~~----~t- 115 (211)
T 3f4w_A 66 ------GHFESQLLFDAGADYVTVLGVTDV---------------LTIQSCIRAAKEAGKQVVVDMI----CV----DD- 115 (211)
T ss_dssp ------HHHHHHHHHHTTCSEEEEETTSCH---------------HHHHHHHHHHHHHTCEEEEECT----TC----SS-
T ss_pred ------hHHHHHHHHhcCCCEEEEeCCCCh---------------hHHHHHHHHHHHcCCeEEEEec----CC----CC-
Confidence 012488999999999998654322 3445778888999988753111 11 22
Q ss_pred HHHHHHHHHHHHCCcCEEEEcCCcCCC---cHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEe
Q 012949 303 SKVAYVAKELHDMGCFEISLGDTIGVG---TPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVD 377 (452)
Q Consensus 303 e~l~~~a~~l~~~Gad~I~L~DT~G~~---~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD 377 (452)
..+.++.+.++|++.|++- .|.. .+....+.++.+++.+|..++.+ +.|....|...++++||+.|=
T Consensus 116 --~~~~~~~~~~~g~d~i~v~--~g~~g~~~~~~~~~~i~~l~~~~~~~~i~~----~gGI~~~~~~~~~~~Gad~vv 185 (211)
T 3f4w_A 116 --LPARVRLLEEAGADMLAVH--TGTDQQAAGRKPIDDLITMLKVRRKARIAV----AGGISSQTVKDYALLGPDVVI 185 (211)
T ss_dssp --HHHHHHHHHHHTCCEEEEE--CCHHHHHTTCCSHHHHHHHHHHCSSCEEEE----ESSCCTTTHHHHHTTCCSEEE
T ss_pred --HHHHHHHHHHcCCCEEEEc--CCCcccccCCCCHHHHHHHHHHcCCCcEEE----ECCCCHHHHHHHHHcCCCEEE
Confidence 2455677778899998773 2311 11113467788888776666665 556666788889999999664
No 25
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=98.05 E-value=0.0004 Score=69.03 Aligned_cols=231 Identities=16% Similarity=0.088 Sum_probs=138.7
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEecchhhhhhhhhhhhhccchhhh
Q 012949 144 TVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVIS 223 (452)
Q Consensus 144 ~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~ 223 (452)
.++.++.++.++.+.+.|++.|-++..-.|. .+ ..+..++++.+++. +..+. +.++.
T Consensus 83 ~ls~eei~~~i~~~~~~g~~~i~~~gGe~p~-~~-~~~~~~li~~i~~~-~~~i~-~s~g~------------------- 139 (348)
T 3iix_A 83 RMTPEEIVERARLAVQFGAKTIVLQSGEDPY-XM-PDVISDIVKEIKKM-GVAVT-LSLGE------------------- 139 (348)
T ss_dssp BCCHHHHHHHHHHHHHTTCSEEEEEESCCGG-GT-THHHHHHHHHHHTT-SCEEE-EECCC-------------------
T ss_pred eCCHHHHHHHHHHHHHCCCCEEEEEeCCCCC-cc-HHHHHHHHHHHHhc-CceEE-EecCC-------------------
Confidence 4799999999999999999998886533221 11 01223344444433 33332 12221
Q ss_pred hhhhccHHhHHHHHHcCCCEEEEEecCC-h-HHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCC
Q 012949 224 SNLWVYLQGFEAAIAAGAKEVAIFASAS-E-AFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIP 301 (452)
Q Consensus 224 ~~~~~~~~~ie~a~~~Gi~~V~i~~s~S-d-~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d 301 (452)
...+.++...++|++.+.+..-.. + .+.+..-+.+ ++...+.++.+++.|+++...++ +|.|.. +
T Consensus 140 ----l~~e~l~~L~~ag~~~v~i~let~~~~~~~~i~~~~~----~~~~~~~i~~~~~~Gi~v~~~~i--~G~p~e---t 206 (348)
T 3iix_A 140 ----WPREYYEKWKEAGADRYLLRHETANPVLHRKLRPDTS----FENRLNCLLTLKELGYETGAGSM--VGLPGQ---T 206 (348)
T ss_dssp ----CCHHHHHHHHHHTCCEEECCCBCSCHHHHHHHSTTSC----HHHHHHHHHHHHHTTCEEEECBE--ESCTTC---C
T ss_pred ----CCHHHHHHHHHhCCCEEeeeeeeCCHHHHHHhCCCcC----HHHHHHHHHHHHHhCCeeccceE--EeCCCC---C
Confidence 123578889999999998765443 3 3322222334 44555677889999998775554 555543 5
Q ss_pred HHHHHHHHHHHHHCCcCEEEE------cCCc----CCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcC---cHHHHHHHH
Q 012949 302 PSKVAYVAKELHDMGCFEISL------GDTI----GVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYG---QSLPNILIS 368 (452)
Q Consensus 302 ~e~l~~~a~~l~~~Gad~I~L------~DT~----G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~G---lA~ANaLaA 368 (452)
.+.+.+.++.+.+.|++.+.+ ++|- ...+++++..+++.++..+|...|- .+.+ +.......|
T Consensus 207 ~e~~~~~~~~l~~l~~~~i~i~~~~p~~gt~l~~~~~~~~~e~~~~~a~~R~~lp~~~i~----~~~~~~~~~~~~~~~~ 282 (348)
T 3iix_A 207 IDDLVDDLLFLKEHDFDMVGIGPFIPHPDTPLANEKKGDFTLTLKMVALTRILLPDSNIP----ATTAMGTIVPGGREIT 282 (348)
T ss_dssp HHHHHHHHHHHHHHTCSEECCEECCCCTTSTTTTSCCCCHHHHHHHHHHHHHHSTTSBCB----CCHHHHHHSTTHHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEeeeeeecCCCCCcccCCCCCHHHHHHHHHHHHHHCCCCCch----hcchhhhcCHHHHHHH
Confidence 788888888888888876553 3332 2346788889999888888874222 2211 112335678
Q ss_pred HHcCCCEEeecc--cCCCCCCCC-------CCCCCcccHHHHHHHHHcCCCCCCCC
Q 012949 369 LQMGISTVDCSV--AGLGGCPYA-------KGASGNVATEDVVYMLSGLGVETNVD 415 (452)
Q Consensus 369 l~aGa~~VD~Sv--~GlGecP~a-------~graGNaalE~vv~~L~~~Gi~t~iD 415 (452)
+.+||+.|-..+ .+.-+ .|. .+-.-.-..++++..++..|+.+..+
T Consensus 283 l~~Gan~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 337 (348)
T 3iix_A 283 LRCGANVIMPNWTPSPYRQ-LYQLYPGKICVFEKDTACIPCVMKMIELLGRKPGRD 337 (348)
T ss_dssp HTTTCCEECCBCCCTTTGG-GCCSSSCCTTTTSCTTCHHHHHHHHHHHTTCEECSS
T ss_pred HhcCCcEEeCCCCchhccc-ccccCCCCcccCCCchhhHHHHHHHHHHcCCEeCCC
Confidence 999999886332 22211 000 01112345777877887777765443
No 26
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=97.72 E-value=0.0076 Score=60.68 Aligned_cols=221 Identities=13% Similarity=0.052 Sum_probs=140.7
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecCC-CCCcccccCCHHHHHHHHHhc--cCCceeEEecchhhhhhhhhhhhhccch
Q 012949 144 TVPTGVKVELIRRLVSSGLPVVEATSFV-SPKWVPQLADARDVMEAVRDL--EGARLPVLTPNLKVILQRSILFQQCHAS 220 (452)
Q Consensus 144 ~~~~~~k~~i~~~L~~~Gv~~IEvG~~~-s~~~~p~~~D~e~v~~~i~~~--~~~~l~~l~~~~~~~i~r~~~~~~~~~~ 220 (452)
.++.++.++.++.+.+.|++.|-++... .|. ..+.+.+.+.++.+ .+..+. +.++..
T Consensus 98 ~~s~eei~~~~~~~~~~g~~~i~~~gg~~~p~----~~~~~~l~~ll~~ik~~g~~i~-~t~G~l--------------- 157 (369)
T 1r30_A 98 LMEVEQVLESARKAKAAGSTRFCMGAAWKNPH----ERDMPYLEQMVQGVKAMGLEAC-MTLGTL--------------- 157 (369)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEEEECCSSCC----TTTHHHHHHHHHHHHHTTSEEE-EECSSC---------------
T ss_pred cCCHHHHHHHHHHHHHcCCcEEEEEeCCCCCC----cCCHHHHHHHHHHHHHcCCeEE-EecCCC---------------
Confidence 4789999999999999999998886422 221 12344555555433 244443 233321
Q ss_pred hhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcC-CCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCC
Q 012949 221 VISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNIN-CSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGA 299 (452)
Q Consensus 221 ~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~-~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r 299 (452)
..+.++..+++|++.+.+.+..++-..+..-+ .+.++ ..+.++.+++.|+.|...++ +|. .
T Consensus 158 --------~~e~l~~L~~aGvd~v~i~les~~e~~~~i~~~~~~~~----~l~~i~~a~~~Gi~v~~~~I--~Gl-~--- 219 (369)
T 1r30_A 158 --------SESQAQRLANAGLDYYNHNLDTSPEFYGNIITTRTYQE----RLDTLEKVRDAGIKVCSGGI--VGL-G--- 219 (369)
T ss_dssp --------CHHHHHHHHHHCCCEEECCCBSCHHHHHHHCCSSCHHH----HHHHHHHHHHHHCEEECCEE--ECS-S---
T ss_pred --------CHHHHHHHHHCCCCEEeecCcCCHHHHHHhCCCCCHHH----HHHHHHHHHHcCCeeeeeeE--eeC-C---
Confidence 23578888999999999887666544333322 34444 44566788888998775554 442 1
Q ss_pred CCHHHHHHHHHHHHHCC--cCEEEE------cCC----cCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCc-CcHHHHHH
Q 012949 300 IPPSKVAYVAKELHDMG--CFEISL------GDT----IGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTY-GQSLPNIL 366 (452)
Q Consensus 300 ~d~e~l~~~a~~l~~~G--ad~I~L------~DT----~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~-GlA~ANaL 366 (452)
-+.+.+.+.++.+.+.+ ++.|.+ ++| ....++.+..++++..+..+|.. .+|.-.-+ .+.-....
T Consensus 220 et~ed~~~~l~~l~~l~~~~~~i~~~~l~p~~gT~l~~~~~~~~~~~~~~~~~~r~~l~~~--~i~i~~~~~~l~~~~~~ 297 (369)
T 1r30_A 220 ETVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDDVDAFDFIRTIAVARIMMPTS--YVRLSAGREQMNEQTQA 297 (369)
T ss_dssp CCHHHHHHHHHHHHSSSSCCSEEEEEECCCCTTSTTSSCCCCCHHHHHHHHHHHHHHCTTS--EEEEESSGGGSCHHHHH
T ss_pred CCHHHHHHHHHHHHhhcCCCCEEEeeeeeecCCCcCCCCCCCCHHHHHHHHHHHHHhCCCC--ceEeecchhhcChHHHH
Confidence 25788889999999987 776654 333 12356788899999999888873 33322111 12233466
Q ss_pred HHHHcCCCEEeecccCCCCCCCCCCCCCcccHHHHHHHHHcCCCCC
Q 012949 367 ISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVET 412 (452)
Q Consensus 367 aAl~aGa~~VD~Sv~GlGecP~a~graGNaalE~vv~~L~~~Gi~t 412 (452)
.++.+||+.+ +. |+ . .-.++|...++.+.+++..|..+
T Consensus 298 ~~l~~Gan~~---~~--g~-~--~~t~~~~~~~~~~~~i~~~g~~~ 335 (369)
T 1r30_A 298 MCFMAGANSI---FY--GC-K--LLTTPNPEEDKDLQLFRKLGLNP 335 (369)
T ss_dssp HHHHHTCCEE---EC--SS-B--SSSSBCCCHHHHHHHHHHTTCCS
T ss_pred HHhhCCCceE---Ee--CC-e--eeCCCCCCHHHHHHHHHHcCCCe
Confidence 7899999943 22 22 0 01346788999999999888754
No 27
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=97.72 E-value=0.00036 Score=67.21 Aligned_cols=179 Identities=18% Similarity=0.187 Sum_probs=105.5
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecCCC-CC----cccc--------cCCHHHHHHHHHh---ccCCceeEEe-cchhh
Q 012949 144 TVPTGVKVELIRRLVSSGLPVVEATSFVS-PK----WVPQ--------LADARDVMEAVRD---LEGARLPVLT-PNLKV 206 (452)
Q Consensus 144 ~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s-~~----~~p~--------~~D~e~v~~~i~~---~~~~~l~~l~-~~~~~ 206 (452)
.++.+...++++.|.+.|++.||+|.+.+ |- .++. -.+.++.++.+++ ..++.+.++. .+..
T Consensus 28 ~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~~~~Pv~~m~~~~~~- 106 (262)
T 1rd5_A 28 DPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPELSCPVVLLSYYKPI- 106 (262)
T ss_dssp SSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGGCSSCEEEECCSHHH-
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEEEEecCcHH-
Confidence 35668999999999999999999997643 21 0000 0122333344433 3233322221 1100
Q ss_pred hhhhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEE
Q 012949 207 ILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRG 286 (452)
Q Consensus 207 ~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~ 286 (452)
. ..+++.+.++|++.|.+..-. ++.+.+.++.+|++|+++..
T Consensus 107 ---------------~-------~~~~~~a~~aGadgv~v~d~~----------------~~~~~~~~~~~~~~g~~~i~ 148 (262)
T 1rd5_A 107 ---------------M-------FRSLAKMKEAGVHGLIVPDLP----------------YVAAHSLWSEAKNNNLELVL 148 (262)
T ss_dssp ---------------H-------SCCTHHHHHTTCCEEECTTCB----------------TTTHHHHHHHHHHTTCEECE
T ss_pred ---------------H-------HHHHHHHHHcCCCEEEEcCCC----------------hhhHHHHHHHHHHcCCceEE
Confidence 0 015566999999988874321 12345777889999988542
Q ss_pred EEEeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEE---EcCCcCC--CcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcH
Q 012949 287 YVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEIS---LGDTIGV--GTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQS 361 (452)
Q Consensus 287 ~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~---L~DT~G~--~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA 361 (452)
.++ | .++.+.+..+.+. +.+.++ +..+.|. ..+....++++.+++..+ .+|.+ +.|..
T Consensus 149 ~~a-----~---~t~~e~~~~~~~~----~~g~v~~~s~~G~tG~~~~~~~~~~~~i~~v~~~~~-~pI~v----gGGI~ 211 (262)
T 1rd5_A 149 LTT-----P---AIPEDRMKEITKA----SEGFVYLVSVNGVTGPRANVNPRVESLIQEVKKVTN-KPVAV----GFGIS 211 (262)
T ss_dssp EEC-----T---TSCHHHHHHHHHH----CCSCEEEECSSCCBCTTSCBCTHHHHHHHHHHHHCS-SCEEE----ESCCC
T ss_pred EEC-----C---CCCHHHHHHHHhc----CCCeEEEecCCCCCCCCcCCCchHHHHHHHHHhhcC-CeEEE----ECCcC
Confidence 121 1 2345555544433 223333 3444565 344667788999998763 46766 88998
Q ss_pred -HHHHHHHHHcCCCEEee
Q 012949 362 -LPNILISLQMGISTVDC 378 (452)
Q Consensus 362 -~ANaLaAl~aGa~~VD~ 378 (452)
..|+.+.+++||+.|-+
T Consensus 212 ~~e~~~~~~~~GAdgvvV 229 (262)
T 1rd5_A 212 KPEHVKQIAQWGADGVII 229 (262)
T ss_dssp SHHHHHHHHHTTCSEEEE
T ss_pred CHHHHHHHHHcCCCEEEE
Confidence 67777778899997653
No 28
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=97.59 E-value=0.00057 Score=66.28 Aligned_cols=186 Identities=11% Similarity=0.103 Sum_probs=112.5
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecCCC-CC-cccccC-----------CHHHHHHHHHhccCCceeEEecchhhhhhh
Q 012949 144 TVPTGVKVELIRRLVSSGLPVVEATSFVS-PK-WVPQLA-----------DARDVMEAVRDLEGARLPVLTPNLKVILQR 210 (452)
Q Consensus 144 ~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s-~~-~~p~~~-----------D~e~v~~~i~~~~~~~l~~l~~~~~~~i~r 210 (452)
..+.+.-.++++.|.+.|.|.||+|.|-| |. -.|... +.+++++.++++... ++.+.
T Consensus 24 ~P~~~~t~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~~r~~-~Pivl--------- 93 (252)
T 3tha_A 24 YPNLQTSEAFLQRLDQSPIDILELGVAYSDPIADGEIIADAAKIALDQGVDIHSVFELLARIKTK-KALVF--------- 93 (252)
T ss_dssp SSCHHHHHHHHHTGGGSSCSEEEEECCCSCCCSCCCHHHHHHHHHHHTTCCHHHHHHHHHHCCCS-SEEEE---------
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCcHHHHHHHHHHHHCCCCHHHHHHHHHHHhcC-CCEEE---------
Confidence 46789999999999999999999998754 32 112111 235566666654321 22211
Q ss_pred hhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEe
Q 012949 211 SILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSC 290 (452)
Q Consensus 211 ~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~ 290 (452)
|+|-.. + ++....+.++.+.++|++.+-+.+-. ++...+..+.++++|+.... +.
T Consensus 94 -m~Y~N~---i---~~~G~e~F~~~~~~aGvdG~IipDLP----------------~eE~~~~~~~~~~~Gl~~I~-lv- 148 (252)
T 3tha_A 94 -MVYYNL---I---FSYGLEKFVKKAKSLGICALIVPELS----------------FEESDDLIKECERYNIALIT-LV- 148 (252)
T ss_dssp -ECCHHH---H---HHHCHHHHHHHHHHTTEEEEECTTCC----------------GGGCHHHHHHHHHTTCEECE-EE-
T ss_pred -EeccCH---H---HHhhHHHHHHHHHHcCCCEEEeCCCC----------------HHHHHHHHHHHHHcCCeEEE-Ee-
Confidence 111110 0 01122357889999999998876521 12235677889999998632 22
Q ss_pred eecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcH--HHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHH
Q 012949 291 VVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTP--GTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILIS 368 (452)
Q Consensus 291 ~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P--~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaA 368 (452)
.| .++.+.+.++++..... +..+....++|...+ ..+.++++.+|+... .|+.+ -+|.......++
T Consensus 149 ---aP---~t~~eRi~~ia~~a~gF-iY~Vs~~GvTG~~~~~~~~~~~~v~~vr~~~~-~Pv~v----GfGIst~e~a~~ 216 (252)
T 3tha_A 149 ---SV---TTPKERVKKLVKHAKGF-IYLLASIGITGTKSVEEAILQDKVKEIRSFTN-LPIFV----GFGIQNNQDVKR 216 (252)
T ss_dssp ---ET---TSCHHHHHHHHTTCCSC-EEEECCSCSSSCSHHHHHHHHHHHHHHHTTCC-SCEEE----ESSCCSHHHHHH
T ss_pred ---CC---CCcHHHHHHHHHhCCCe-EEEEecCCCCCcccCCCHHHHHHHHHHHHhcC-CcEEE----EcCcCCHHHHHH
Confidence 12 23456666555432111 234444456777654 457899999998753 46766 567777777777
Q ss_pred HHcCCCEE
Q 012949 369 LQMGISTV 376 (452)
Q Consensus 369 l~aGa~~V 376 (452)
+..+||.|
T Consensus 217 ~~~~ADGV 224 (252)
T 3tha_A 217 MRKVADGV 224 (252)
T ss_dssp HTTTSSEE
T ss_pred HHhcCCEE
Confidence 77777754
No 29
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=97.57 E-value=0.0079 Score=59.24 Aligned_cols=224 Identities=13% Similarity=0.070 Sum_probs=138.7
Q ss_pred cCCCchhhHHHHHhhhcCCC--C------------ccEEEeCCccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecC
Q 012949 105 SNCNDKDIRDITNKFLKGIP--R------------FVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSF 170 (452)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~p--~------------~V~I~D~TLRDG~Q~~~~~~~~~~k~~i~~~L~~~Gv~~IEvG~~ 170 (452)
...++.+++.+.+.+.+.+| . -.+.+|-|+ .+-..+.++..++++...+.|+..|.+-
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~IDhTl------L~p~~T~~dI~~lc~eA~~~g~aaVCV~-- 94 (288)
T 3oa3_A 23 SSLNNEEWDLLISGKKATLQYPIPLLCYPAPEVVSIAQIIDHTQ------LSLSATGSQIDVLCAEAKEYGFATVCVR-- 94 (288)
T ss_dssp TTCCHHHHHHHHHHHHTTSCSSCCCSCSCCCCGGGGGGGEEEEC------CCTTCCHHHHHHHHHHHHHHTCSEEEEC--
T ss_pred CCCCcHHHHHHHHHHHHhcCCccccccCCCCCHHHHHHhcCccc------CCCCCCHHHHHHHHHHHHhcCCcEEEEC--
Confidence 34577788888888777763 1 244566665 2235688999999999999999999883
Q ss_pred CCCCcccccCCHHHHHHHHHhccCCceeEEe--cchhhhhhhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEe
Q 012949 171 VSPKWVPQLADARDVMEAVRDLEGARLPVLT--PNLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFA 248 (452)
Q Consensus 171 ~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~--~~~~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~ 248 (452)
|.|++ ...+.++. .++++..++ |.- ..+.+ .....++.|++.|+++|.+.+
T Consensus 95 --P~~V~------~a~~~L~~-s~V~V~tVigFP~G-----------~~~~~-------~Kv~Ea~~Ai~~GAdEIDmVI 147 (288)
T 3oa3_A 95 --PDYVS------RAVQYLQG-TQVGVTCVIGFHEG-----------TYSTD-------QKVSEAKRAMQNGASELDMVM 147 (288)
T ss_dssp --GGGHH------HHHHHTTT-SSCEEEEEESTTTS-----------CSCHH-------HHHHHHHHHHHTTCSEEEEEC
T ss_pred --HHHHH------HHHHHcCC-CCCeEEEEeCCCCC-----------CCcHH-------HHHHHHHHHHHcCCCEEEEEe
Confidence 33333 22333322 245554433 211 11111 123478889999999999998
Q ss_pred cCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcC--Cc
Q 012949 249 SASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGD--TI 326 (452)
Q Consensus 249 s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~D--T~ 326 (452)
..... .....++..+.+..+.+.|.+..++|. .. .+..+.+.+...++.+.++|||-|--.- +.
T Consensus 148 Nig~l-----k~g~~~~v~~eI~~V~~a~~~~~lKVI----lE-----t~~Lt~eei~~A~~ia~eaGADfVKTSTGf~~ 213 (288)
T 3oa3_A 148 NYPWL-----SEKRYTDVFQDIRAVRLAAKDAILKVI----LE-----TSQLTADEIIAGCVLSSLAGADYVKTSTGFNG 213 (288)
T ss_dssp CHHHH-----HTTCHHHHHHHHHHHHHHTTTSEEEEE----CC-----GGGCCHHHHHHHHHHHHHTTCSEEECCCSSSS
T ss_pred ehhhh-----cCCcHHHHHHHHHHHHHHhcCCCceEE----EE-----CCCCCHHHHHHHHHHHHHcCCCEEEcCCCCCC
Confidence 65432 223456777777777776655333332 21 1245678888899999999999887762 12
Q ss_pred CCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEeecc
Q 012949 327 GVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCSV 380 (452)
Q Consensus 327 G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~Sv 380 (452)
|.++++.+.-| +.+.+.++. ++.+-.-----. ...+++-+++||++|-+|.
T Consensus 214 ~GAT~edv~lm-r~~v~~~g~-~v~VKAAGGIrt-~edAl~mi~aGA~RiGtS~ 264 (288)
T 3oa3_A 214 PGASIENVSLM-SAVCDSLQS-ETRVKASGGIRT-IEDCVKMVRAGAERLGASA 264 (288)
T ss_dssp CCCCHHHHHHH-HHHHHHSSS-CCEEEEESSCCS-HHHHHHHHHTTCSEEEESC
T ss_pred CCCCHHHHHHH-HHHHHHhCC-CceEEEeCCCCC-HHHHHHHHHcCCceeehhh
Confidence 46688887654 444443322 344443222121 2788889999999886653
No 30
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=97.45 E-value=0.0044 Score=64.42 Aligned_cols=146 Identities=14% Similarity=0.058 Sum_probs=99.9
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEE-EEEeeecCCCC------------
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRG-YVSCVVGCPVE------------ 297 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~-~l~~~~g~p~~------------ 297 (452)
+.+.+++++|...|++=.|..+. ..|...|.+-.+++..+++++|++.+..+.. .+.++.|.++.
T Consensus 115 e~i~~aI~AGFtSVMiD~S~~p~--eeNi~lt~evva~rtaeL~~~A~~~~~~~g~~e~~yviGtEvpvpGGa~~~~~~~ 192 (450)
T 3txv_A 115 AMITAYAKAGFTKLHLDTSMGCA--GEPTALPDATTAARAARLAAVAEDAVGGRGGVLPVYIIGTEVPIPGGALEELDTL 192 (450)
T ss_dssp HHHHHHHTTTCCEEEECCCBCCS--SSCSBCCHHHHHHHHHHHHHHHHHTC------CCEEEEECC-------------C
T ss_pred HHHHHHHHcCCCEEEECCCCCch--hhccchhHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeeeecCCCCccccccccC
Confidence 47788999999999986665553 5678889999999999999999987554421 24455676552
Q ss_pred CCCCHHHHHHHHHH----HHHCCcC-----EEEEcCCcCCCcH-----HHHHHHHHHHHHhCCCcc-EEEEeCCCcCcHH
Q 012949 298 GAIPPSKVAYVAKE----LHDMGCF-----EISLGDTIGVGTP-----GTVVPMLEAVMAVVPVEK-LAVHLHDTYGQSL 362 (452)
Q Consensus 298 ~r~d~e~l~~~a~~----l~~~Gad-----~I~L~DT~G~~~P-----~~v~~li~~l~~~~p~~~-l~vH~Hnd~GlA~ 362 (452)
..++|+...+.++. +.+.|++ .+.|+=..|+..- .-=.+.++.|++.++..| |.+|.|++-|+.-
T Consensus 193 ~~T~PeeA~~fv~~~~~~f~~~gld~~w~~v~~lvVqpGt~f~~~~v~~y~~e~~~~L~~~v~~~P~LVlhghStDy~~~ 272 (450)
T 3txv_A 193 EVTAPEAAIETVRVHRAAFEEAGAAGAFSRVVGAVVQPGVEFGNENVIAYDRARAEKLSATLGQLHGMVFEAHSTDYQTP 272 (450)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTCHHHHTTEEEEECCCSCEECSSCEECCCTTTTSHHHHGGGTSTTCEEEESCCTTCCH
T ss_pred CCCCHHHHHHHHHHHHHHHHHhCcccccCceeEEEecCCcccCCCCCCCCCHHHHHHHHHHhccCCCEEEecCCCCCCCH
Confidence 24788877766653 4455663 4455544554431 000124445555554455 9999999999999
Q ss_pred HHHHHHHHcCCCEEee
Q 012949 363 PNILISLQMGISTVDC 378 (452)
Q Consensus 363 ANaLaAl~aGa~~VD~ 378 (452)
.+...+++.|+..+++
T Consensus 273 e~l~~~V~~GiaklNV 288 (450)
T 3txv_A 273 DALRELVADGFAILKV 288 (450)
T ss_dssp HHHHHHHHTTEEEEEE
T ss_pred HHHHHHHHcCCcEEEE
Confidence 9999999999998876
No 31
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=97.16 E-value=0.022 Score=55.35 Aligned_cols=199 Identities=13% Similarity=0.059 Sum_probs=122.9
Q ss_pred EEeCCccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEecchhhhh
Q 012949 129 IVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVIL 208 (452)
Q Consensus 129 I~D~TLRDG~Q~~~~~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~~~~~~i 208 (452)
.+|-|+= +...+.++..++++...+.|+..+.+ +|.|+| ...+.++. .++++...+ +..
T Consensus 46 ~IDhTlL------~p~~t~~~I~~lc~eA~~~~~aaVCV----~p~~V~------~a~~~L~g-s~v~v~tVi-gFP--- 104 (260)
T 3r12_A 46 AIEHTNL------KPFATPDDIKKLCLEARENRFHGVCV----NPCYVK------LAREELEG-TDVKVVTVV-GFP--- 104 (260)
T ss_dssp HEEEEEC------CTTCCHHHHHHHHHHHHHTTCSEEEE----CGGGHH------HHHHHHTT-SCCEEEEEE-STT---
T ss_pred hcCcccC------CCCCCHHHHHHHHHHHHhcCCcEEEE----CHHHHH------HHHHHhcC-CCCeEEEEe-cCC---
Confidence 5677772 22568899999999999999999998 333443 22333322 345555433 110
Q ss_pred hhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEE
Q 012949 209 QRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYV 288 (452)
Q Consensus 209 ~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l 288 (452)
++..+.+ +....++.|++.|++.|.+.+..... .....++..+.+..+++.+. |..+- +
T Consensus 105 -----~G~~~~~-------~Kv~Ea~~Ai~~GAdEIDmViNig~l-----k~g~~~~v~~eI~~v~~a~~--~~~lK--V 163 (260)
T 3r12_A 105 -----LGANETR-------TKAHEAIFAVESGADEIDMVINVGML-----KAKEWEYVYEDIRSVVESVK--GKVVK--V 163 (260)
T ss_dssp -----TCCSCHH-------HHHHHHHHHHHHTCSEEEEECCHHHH-----HTTCHHHHHHHHHHHHHHTT--TSEEE--E
T ss_pred -----CCCCcHH-------HHHHHHHHHHHcCCCEEEEEeehhhh-----ccccHHHHHHHHHHHHHhcC--CCcEE--E
Confidence 1111111 12347788999999999999876543 12346677777777776654 44332 2
Q ss_pred EeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcC--CcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHH
Q 012949 289 SCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGD--TIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNIL 366 (452)
Q Consensus 289 ~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~D--T~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaL 366 (452)
... .+..+.+.+.+.++.+.++|||-|--.- ..|.++++++.-+-+.+ +. ++.+-.-----. ...++
T Consensus 164 IlE-----t~~Lt~eei~~A~~ia~eaGADfVKTSTGf~~~GAT~edV~lm~~~v----g~-~v~VKaAGGIrt-~~~al 232 (260)
T 3r12_A 164 IIE-----TCYLDTEEKIAACVISKLAGAHFVKTSTGFGTGGATAEDVHLMKWIV----GD-EMGVKASGGIRT-FEDAV 232 (260)
T ss_dssp ECC-----GGGCCHHHHHHHHHHHHHTTCSEEECCCSSSSCCCCHHHHHHHHHHH----CT-TSEEEEESSCCS-HHHHH
T ss_pred EEe-----CCCCCHHHHHHHHHHHHHhCcCEEEcCCCCCCCCCCHHHHHHHHHHh----CC-CceEEEeCCCCC-HHHHH
Confidence 221 1345778899999999999999887762 12356777776665544 32 344443322221 26777
Q ss_pred HHHHcCCCEEeecc
Q 012949 367 ISLQMGISTVDCSV 380 (452)
Q Consensus 367 aAl~aGa~~VD~Sv 380 (452)
+=+++||+++-+|-
T Consensus 233 ~mi~aGA~RiGtS~ 246 (260)
T 3r12_A 233 KMIMYGADRIGTSS 246 (260)
T ss_dssp HHHHTTCSEEEESC
T ss_pred HHHHcCCceeecch
Confidence 77999999987664
No 32
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=96.97 E-value=0.012 Score=57.07 Aligned_cols=189 Identities=18% Similarity=0.118 Sum_probs=115.7
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEecchhhhhhhhhhh-hhccchhhhh
Q 012949 146 PTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILF-QQCHASVISS 224 (452)
Q Consensus 146 ~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~~~~~~i~r~~~~-~~~~~~~i~~ 224 (452)
+.++..++++...+.|++.+-+.. . ..+... ..+..+.+-+.. ..+| .+.+...
T Consensus 39 ~~~di~~~~~~a~~~~~~av~v~~----~----------~v~~~~-~~~~~liv~~~~-------~~~~~g~~~~~~--- 93 (263)
T 1w8s_A 39 DSADPEYILRLARDAGFDGVVFQR----G----------IAEKYY-DGSVPLILKLNG-------KTTLYNGEPVSV--- 93 (263)
T ss_dssp GGGCHHHHHHHHHHHTCSEEEECH----H----------HHHHHC-CSSSCEEEECEE-------CCTTCCSSCCCE---
T ss_pred chhhHHHHHHHHHhhCCCEEEECH----H----------HHHHhh-cCCCcEEEEEeC-------CCCcCCCCccch---
Confidence 577888999999999999999842 1 122222 222221110000 0111 1111110
Q ss_pred hhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHH
Q 012949 225 NLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSK 304 (452)
Q Consensus 225 ~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~ 304 (452)
....++.|++.|++.|.+.....+ .+.++.++.+.++++.+++.|+++... ++.-|.......+++.
T Consensus 94 ----~~~~ve~Ai~~Ga~~v~~~~nig~--------~~~~~~~~~~~~v~~~~~~~~~~vIi~-~~~~G~~~~~~~s~~~ 160 (263)
T 1w8s_A 94 ----ANCSVEEAVSLGASAVGYTIYPGS--------GFEWKMFEELARIKRDAVKFDLPLVVE-SFPRGGKVVNETAPEI 160 (263)
T ss_dssp ----ESSCHHHHHHTTCSEEEEEECTTS--------TTHHHHHHHHHHHHHHHHHHTCCEEEE-ECCCSTTCCCTTCHHH
T ss_pred ----HHHHHHHHHHCCCCEEEEEEecCC--------cCHHHHHHHHHHHHHHHHHcCCeEEEE-eeCCCCccccCCCHHH
Confidence 113788999999999988763221 235678899999999999999997543 3322211111126788
Q ss_pred HHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCC--CcCcHHHHHHHHHHcCCCEEee
Q 012949 305 VAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHD--TYGQSLPNILISLQMGISTVDC 378 (452)
Q Consensus 305 l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hn--d~GlA~ANaLaAl~aGa~~VD~ 378 (452)
+.+.++.+.++|||.|-.. +.| +|+.++++.+.. ...|. +..=.=. |...+++|.-.++++||+.+-.
T Consensus 161 i~~a~~~a~~~GAD~vkt~-~~~--~~e~~~~~~~~~-~~~pV--~asGGi~~~~~~~~l~~i~~~~~aGA~Gvsv 230 (263)
T 1w8s_A 161 VAYAARIALELGADAMKIK-YTG--DPKTFSWAVKVA-GKVPV--LMSGGPKTKTEEDFLKQVEGVLEAGALGIAV 230 (263)
T ss_dssp HHHHHHHHHHHTCSEEEEE-CCS--SHHHHHHHHHHT-TTSCE--EEECCSCCSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHcCCCEEEEc-CCC--CHHHHHHHHHhC-CCCeE--EEEeCCCCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 8888899999999998888 432 566666655443 22242 2222223 7788899999999999985543
No 33
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=96.97 E-value=0.089 Score=51.57 Aligned_cols=201 Identities=15% Similarity=0.135 Sum_probs=112.4
Q ss_pred cEEEeCCc---cccCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecCC-CCCcccccC---CHHHHHHHHHhcc--CCce
Q 012949 127 VKIVEVGP---RDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFV-SPKWVPQLA---DARDVMEAVRDLE--GARL 197 (452)
Q Consensus 127 V~I~D~TL---RDG~Q~~~~~~~~~~k~~i~~~L~~~Gv~~IEvG~~~-s~~~~p~~~---D~e~v~~~i~~~~--~~~l 197 (452)
.-|+.+|+ =||.+ .++.+..++.++.+.+.|-+.|++|.-+ .|.. +.+. +.+.+...++.+. ++.+
T Consensus 9 mgilN~TpDSFsdgg~----~~~~~~a~~~a~~~v~~GAdiIDIGgestrpga-~~v~~~eE~~Rv~pvi~~l~~~~~pi 83 (280)
T 1eye_A 9 MGVLNVTDDSFSDGGC----YLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGA-TRVDPAVETSRVIPVVKELAAQGITV 83 (280)
T ss_dssp EEEEECSCCTTCSSCC----CCSHHHHHHHHHHHHHTTCSEEEEECC---------------HHHHHHHHHHHHHTTCCE
T ss_pred EEEEeCCCCCcCCCcc----cCCHHHHHHHHHHHHHCCCCEEEECCccCCCCC-CCCCHHHHHHHHHHHHHHhhcCCCEE
Confidence 34566666 45544 4789999999999999999999999632 2321 1121 1222233333332 4444
Q ss_pred eEEecchhhhhhhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHH
Q 012949 198 PVLTPNLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAA 277 (452)
Q Consensus 198 ~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~A 277 (452)
++=+.. .+-+++|+++|++.|.=..... ...++++.+
T Consensus 84 SIDT~~--------------------------~~va~aAl~aGa~iINdvsg~~-----------------~d~~m~~~~ 120 (280)
T 1eye_A 84 SIDTMR--------------------------ADVARAALQNGAQMVNDVSGGR-----------------ADPAMGPLL 120 (280)
T ss_dssp EEECSC--------------------------HHHHHHHHHTTCCEEEETTTTS-----------------SCTTHHHHH
T ss_pred EEeCCC--------------------------HHHHHHHHHcCCCEEEECCCCC-----------------CCHHHHHHH
Confidence 432222 2377899999998776332211 011345667
Q ss_pred HhCCCcEEEEEEeeecCCCCCC-----C-C-----HHHHHHHHHHHHHCCcC--EEEEcCC-cCCC-cHHHHHHHHHHHH
Q 012949 278 KVLSIPVRGYVSCVVGCPVEGA-----I-P-----PSKVAYVAKELHDMGCF--EISLGDT-IGVG-TPGTVVPMLEAVM 342 (452)
Q Consensus 278 k~~G~~V~~~l~~~~g~p~~~r-----~-d-----~e~l~~~a~~l~~~Gad--~I~L~DT-~G~~-~P~~v~~li~~l~ 342 (452)
++.|..+. ++..-|.|..-. + + .+++.+.++.+.++|++ .|.| |. +|.. +.++-.++++.+.
T Consensus 121 a~~~~~vV--lmh~~G~p~tm~~~~~~y~dv~~~v~~~l~~~i~~a~~~Gi~~~~Iil-DPg~Gf~k~~~~n~~ll~~l~ 197 (280)
T 1eye_A 121 AEADVPWV--LMHWRAVSADTPHVPVRYGNVVAEVRADLLASVADAVAAGVDPARLVL-DPGLGFAKTAQHNWAILHALP 197 (280)
T ss_dssp HHHTCCEE--EECCCCSCTTCTTSCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEE-ECCTTSSCCHHHHHHHHHTHH
T ss_pred HHhCCeEE--EEcCCCCCcchhhcCcchhHHHHHHHHHHHHHHHHHHHcCCChhhEEE-ECCCCcccCHHHHHHHHHHHH
Confidence 78888775 555444443211 1 1 56777788889999987 6666 54 2322 3566667776665
Q ss_pred HhC-CCccEEEEeCCCc-----------C----------cHHHHHHHHHHcCCCEEeec
Q 012949 343 AVV-PVEKLAVHLHDTY-----------G----------QSLPNILISLQMGISTVDCS 379 (452)
Q Consensus 343 ~~~-p~~~l~vH~Hnd~-----------G----------lA~ANaLaAl~aGa~~VD~S 379 (452)
.-- ++.|+-+ +..+- | .-.|-+..|++.|+++|.+.
T Consensus 198 ~~~~~g~Pvl~-G~Srksfi~~~~~~~~g~~~~~~~R~~~t~a~~~~a~~~Ga~Ivrvh 255 (280)
T 1eye_A 198 ELVATGIPVLV-GASRKRFLGALLAGPDGVMRPTDGRDTATAVISALAALHGAWGVRVH 255 (280)
T ss_dssp HHHTTSSCBEE-CCTTCHHHHHHTCCSSSCCCCGGGGHHHHHHHHHHHHHTTCSEEEES
T ss_pred HhhcCCCCEEE-EecchHHHHhhhccccCCCCCcccchHHHHHHHHHHHHcCCCEEEeC
Confidence 421 3333333 22220 2 23455667778888877553
No 34
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=96.88 E-value=0.034 Score=54.82 Aligned_cols=202 Identities=18% Similarity=0.170 Sum_probs=130.8
Q ss_pred cCCCCCC--CCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhc-c--CCceeEEecchhhhhhhh
Q 012949 137 GLQNEKN--TVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDL-E--GARLPVLTPNLKVILQRS 211 (452)
Q Consensus 137 G~Q~~~~--~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~-~--~~~l~~l~~~~~~~i~r~ 211 (452)
+.+..+. ..+.+....+++...+.+-+.|--.++..-++. ...+.+...++.. . ...+++.+.. .
T Consensus 19 ~~yAV~AfNv~n~e~~~avi~AAee~~sPvIlq~s~~~~~~~---~g~~~~~~~v~~~A~~~~~~VPValHl-D------ 88 (288)
T 3q94_A 19 GKYAVGQFNMNNLEWTQAILAAAEEEKSPVILGVSEGAARHM---TGFKTVVAMVKALIEEMNITVPVAIHL-D------ 88 (288)
T ss_dssp HTCCEEEEECCSHHHHHHHHHHHHHTTCCEEEEEEHHHHHHT---SCHHHHHHHHHHHHHHTTCCSCEEEEE-E------
T ss_pred CCcEEEEEeeCCHHHHHHHHHHHHHhCCCEEEECChhhhhhc---CCHHHHHHHHHHHHHhcCCCCcEEEEC-C------
Confidence 4454443 478899999999999999997765443211110 1222233333321 2 3344432211 0
Q ss_pred hhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEee
Q 012949 212 ILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCV 291 (452)
Q Consensus 212 ~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~ 291 (452)
.+ ...+.+.+|+++|..-|.+=.|. .+.+|.++.-++++++|+..|+.|.+.|-..
T Consensus 89 ----Hg----------~~~e~i~~ai~~GFtSVMiDgS~----------~p~eeNi~~Tk~vv~~ah~~gvsVEaElG~v 144 (288)
T 3q94_A 89 ----HG----------SSFEKCKEAIDAGFTSVMIDASH----------HPFEENVETTKKVVEYAHARNVSVEAELGTV 144 (288)
T ss_dssp ----EE----------CSHHHHHHHHHHTCSEEEECCTT----------SCHHHHHHHHHHHHHHHHTTTCEEEEEESBC
T ss_pred ----CC----------CCHHHHHHHHHcCCCeEEEeCCC----------CCHHHHHHHHHHHHHHHHHcCCeEEEEeeee
Confidence 01 02357889999999988874443 2468999999999999999999999888876
Q ss_pred ecCCCC------CCCCHHHHHHHHHHHHHCCcCEEEEc--CCcCCC--cHHHHHHHHHHHHHhCCCccEEEEeCCCcCcH
Q 012949 292 VGCPVE------GAIPPSKVAYVAKELHDMGCFEISLG--DTIGVG--TPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQS 361 (452)
Q Consensus 292 ~g~p~~------~r~d~e~l~~~a~~l~~~Gad~I~L~--DT~G~~--~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA 361 (452)
-|.+|. ..++|+...+++++ .|+|.+.++ -.=|.- .|.-=.++++.+++.+| +||.+|+= -|..
T Consensus 145 gG~Ed~~~~~~~~yT~Peea~~Fv~~---TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~v~-vpLVlHGg--SG~~ 218 (288)
T 3q94_A 145 GGQEDDVIAEGVIYADPAECKHLVEA---TGIDCLAPALGSVHGPYKGEPNLGFAEMEQVRDFTG-VPLVLHGG--TGIP 218 (288)
T ss_dssp BCSCSSCGGGGCBCCCHHHHHHHHHH---HCCSEEEECSSCBSSCCSSSCCCCHHHHHHHHHHHC-SCEEECCC--TTCC
T ss_pred ccccCCcCCccccCCCHHHHHHHHHH---HCCCEEEEEcCcccCCcCCCCccCHHHHHHHHHhcC-CCEEEeCC--CCCC
Confidence 555543 25889988887764 489866653 222221 13223456677777776 57887765 4888
Q ss_pred HHHHHHHHHcCCCEEee
Q 012949 362 LPNILISLQMGISTVDC 378 (452)
Q Consensus 362 ~ANaLaAl~aGa~~VD~ 378 (452)
-.....|+..|+.-|+.
T Consensus 219 ~e~i~~ai~~Gv~KiNi 235 (288)
T 3q94_A 219 TADIEKAISLGTSKINV 235 (288)
T ss_dssp HHHHHHHHHTTEEEEEE
T ss_pred HHHHHHHHHcCCeEEEE
Confidence 89999999999876643
No 35
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=96.87 E-value=0.0089 Score=57.20 Aligned_cols=154 Identities=19% Similarity=0.111 Sum_probs=101.2
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHh-ccCCceeEEecchhhhhhhhhhhhhccchhhh
Q 012949 145 VPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRD-LEGARLPVLTPNLKVILQRSILFQQCHASVIS 223 (452)
Q Consensus 145 ~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~-~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~ 223 (452)
-+.++-.++++.|.+.|++.||+++-. | +..+.++.+++ .++..+.+-+ .
T Consensus 43 ~~~~~a~~~a~al~~gGi~~iEvt~~t-~-------~a~e~I~~l~~~~~~~~iGaGT--V------------------- 93 (232)
T 4e38_A 43 DNAEDIIPLGKVLAENGLPAAEITFRS-D-------AAVEAIRLLRQAQPEMLIGAGT--I------------------- 93 (232)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEETTS-T-------THHHHHHHHHHHCTTCEEEEEC--C-------------------
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCC-C-------CHHHHHHHHHHhCCCCEEeECC--c-------------------
Confidence 456788999999999999999998642 1 34456666654 4443332211 0
Q ss_pred hhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHH
Q 012949 224 SNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPS 303 (452)
Q Consensus 224 ~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e 303 (452)
.+.++++.|+++|++.|... ..+ .++++++++.|+.+..- -.+++
T Consensus 94 ----lt~~~a~~Ai~AGA~fIvsP--~~~------------------~~vi~~~~~~gi~~ipG-----------v~Tpt 138 (232)
T 4e38_A 94 ----LNGEQALAAKEAGATFVVSP--GFN------------------PNTVRACQEIGIDIVPG-----------VNNPS 138 (232)
T ss_dssp ----CSHHHHHHHHHHTCSEEECS--SCC------------------HHHHHHHHHHTCEEECE-----------ECSHH
T ss_pred ----CCHHHHHHHHHcCCCEEEeC--CCC------------------HHHHHHHHHcCCCEEcC-----------CCCHH
Confidence 12358999999999988632 111 25668889999886521 22455
Q ss_pred HHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCC
Q 012949 304 KVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGIS 374 (452)
Q Consensus 304 ~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~ 374 (452)
++. .+.++|+|.|.+-=+ +.. + =.++++.++..+|.+++-. +=|....|.-..+.+|+.
T Consensus 139 Ei~----~A~~~Gad~vK~FPa-~~~-g--G~~~lkal~~p~p~ip~~p----tGGI~~~n~~~~l~aGa~ 197 (232)
T 4e38_A 139 TVE----AALEMGLTTLKFFPA-EAS-G--GISMVKSLVGPYGDIRLMP----TGGITPSNIDNYLAIPQV 197 (232)
T ss_dssp HHH----HHHHTTCCEEEECST-TTT-T--HHHHHHHHHTTCTTCEEEE----BSSCCTTTHHHHHTSTTB
T ss_pred HHH----HHHHcCCCEEEECcC-ccc-c--CHHHHHHHHHHhcCCCeee----EcCCCHHHHHHHHHCCCe
Confidence 544 346789998887221 111 0 1378899988888766553 456666899999999975
No 36
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=96.85 E-value=0.094 Score=50.28 Aligned_cols=199 Identities=17% Similarity=0.141 Sum_probs=125.1
Q ss_pred EEeCCccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEecchhhhh
Q 012949 129 IVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVIL 208 (452)
Q Consensus 129 I~D~TLRDG~Q~~~~~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~~~~~~i 208 (452)
.+|-|+= +...+.++..++++...+.|+..+.+- |.|+| ...+.++. .++++...+ +..
T Consensus 30 ~IDhTlL------~p~~t~~~i~~lc~eA~~~~~~aVcV~----p~~v~------~a~~~L~~-s~v~v~tVi-gFP--- 88 (239)
T 3ngj_A 30 YIDHTLL------KADATEEQIRKLCSEAAEYKFASVCVN----PTWVP------LCAELLKG-TGVKVCTVI-GFP--- 88 (239)
T ss_dssp TEEEEEC------CTTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHH------HHHHHHTT-SSCEEEEEE-STT---
T ss_pred hcCcccC------CCCCCHHHHHHHHHHHHhcCCcEEEEC----HHHHH------HHHHHhCC-CCCeEEEEe-ccC---
Confidence 5677772 225688999999999999999999882 33343 22333332 345555433 110
Q ss_pred hhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEE
Q 012949 209 QRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYV 288 (452)
Q Consensus 209 ~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l 288 (452)
++..+.+ .....++.|++.|++.|.+.+...... ....+..++.+..+++.+...-++|
T Consensus 89 -----~G~~~~~-------~Kv~Ea~~Ai~~GAdEIDmViNig~lk-----~g~~~~v~~eI~~v~~a~~~~~lKV---- 147 (239)
T 3ngj_A 89 -----LGATPSE-------VKAYETKVAVEQGAEEVDMVINIGMVK-----AKKYDDVEKDVKAVVDASGKALTKV---- 147 (239)
T ss_dssp -----TCCSCHH-------HHHHHHHHHHHTTCSEEEEECCHHHHH-----TTCHHHHHHHHHHHHHHHTTSEEEE----
T ss_pred -----CCCCchH-------HHHHHHHHHHHcCCCEEEEEeehHHhc-----cccHHHHHHHHHHHHHHhcCCceEE----
Confidence 0111111 123477889999999999998765431 3456778888888888876432222
Q ss_pred EeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcC--CcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHH
Q 012949 289 SCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGD--TIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNIL 366 (452)
Q Consensus 289 ~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~D--T~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaL 366 (452)
... .+..+.+.+.+.++.+.++|+|-|--.- +.|..+++++..+-+.+.. ++.+-.-----. ...++
T Consensus 148 IlE-----t~~Lt~eei~~a~~ia~~aGADfVKTSTGf~~ggAt~~dv~lmr~~vg~-----~v~VKasGGIrt-~~da~ 216 (239)
T 3ngj_A 148 IIE-----CCYLTNEEKVEVCKRCVAAGAEYVKTSTGFGTHGATPEDVKLMKDTVGD-----KALVKAAGGIRT-FDDAM 216 (239)
T ss_dssp ECC-----GGGSCHHHHHHHHHHHHHHTCSEEECCCSSSSCCCCHHHHHHHHHHHGG-----GSEEEEESSCCS-HHHHH
T ss_pred EEe-----cCCCCHHHHHHHHHHHHHHCcCEEECCCCCCCCCCCHHHHHHHHHhhCC-----CceEEEeCCCCC-HHHHH
Confidence 221 1245788899999999999999887652 2456788887776555433 333433222111 27888
Q ss_pred HHHHcCCCEEeecc
Q 012949 367 ISLQMGISTVDCSV 380 (452)
Q Consensus 367 aAl~aGa~~VD~Sv 380 (452)
+-+++||++|-+|-
T Consensus 217 ~~i~aGA~riGtS~ 230 (239)
T 3ngj_A 217 KMINNGASRIGASA 230 (239)
T ss_dssp HHHHTTEEEEEESC
T ss_pred HHHHhcccceeccc
Confidence 88899999886653
No 37
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=96.85 E-value=0.17 Score=48.26 Aligned_cols=195 Identities=12% Similarity=0.099 Sum_probs=122.0
Q ss_pred cEEEeCCccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEe--cch
Q 012949 127 VKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLT--PNL 204 (452)
Q Consensus 127 V~I~D~TLRDG~Q~~~~~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~--~~~ 204 (452)
+..+|-|+ - +-..+.++..++++...+.|+..+.+- |.|+ ...+.++..+++++...+ |.-
T Consensus 21 ~~~iDht~-L-----~p~~t~~~i~~l~~~a~~~~~~aVcv~----p~~v-------~a~~~l~~~~~v~v~tvigFP~G 83 (234)
T 1n7k_A 21 ASRIDSTL-L-----SPRATEEDVRNLVREASDYGFRCAVLT----PVYT-------VKISGLAEKLGVKLCSVIGFPLG 83 (234)
T ss_dssp HTTEEEEC-C-----CTTCCHHHHHHHHHHHHHHTCSEEEEC----HHHH-------HHHHHHHHHHTCCEEEEESTTTC
T ss_pred HHHhceec-c-----CCCCCHHHHHHHHHHHHHhCCCEEEEc----hHHh-------eeehHhCCCCCceEEEEeCCCCC
Confidence 34566666 1 234589999999999999999999983 2111 112223221256666554 221
Q ss_pred hhhhhhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcE
Q 012949 205 KVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPV 284 (452)
Q Consensus 205 ~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V 284 (452)
. .+.+ .....++.|++.|++.|.+.+..... .++.++.+..+++.+.+.|..+
T Consensus 84 ~-----------~~~~-------~k~~e~~~Av~~GAdEID~vinig~~---------~~~v~~ei~~v~~a~~~~g~~l 136 (234)
T 1n7k_A 84 Q-----------APLE-------VKLVEAQTVLEAGATELDVVPHLSLG---------PEAVYREVSGIVKLAKSYGAVV 136 (234)
T ss_dssp C-----------SCHH-------HHHHHHHHHHHHTCCEEEECCCGGGC---------HHHHHHHHHHHHHHHHHTTCEE
T ss_pred C-----------CcHH-------HHHHHHHHHHHcCCCEEEEeccchHH---------HHHHHHHHHHHHHHHhhcCCeE
Confidence 1 1111 12247889999999999998865543 2277888888899999888866
Q ss_pred EEEEEeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCc---CCCcHHHHHHHHHHHHHhCCCccEEEEe--CCCcC
Q 012949 285 RGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTI---GVGTPGTVVPMLEAVMAVVPVEKLAVHL--HDTYG 359 (452)
Q Consensus 285 ~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~---G~~~P~~v~~li~~l~~~~p~~~l~vH~--Hnd~G 359 (452)
-+-+. . ...+++.+...++.+.++|||.|--.-.. |..+++.+.- +++++.++ ++|-.=. + +
T Consensus 137 KvIlE--t-----~~L~~e~i~~a~ria~eaGADfVKTsTG~~~~~gAt~~dv~l--~~m~~~v~-v~VKaaGGir-t-- 203 (234)
T 1n7k_A 137 KVILE--A-----PLWDDKTLSLLVDSSRRAGADIVKTSTGVYTKGGDPVTVFRL--ASLAKPLG-MGVKASGGIR-S-- 203 (234)
T ss_dssp EEECC--G-----GGSCHHHHHHHHHHHHHTTCSEEESCCSSSCCCCSHHHHHHH--HHHHGGGT-CEEEEESSCC-S--
T ss_pred EEEEe--c-----cCCCHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCCHHHHHH--HHHHHHHC-CCEEEecCCC-C--
Confidence 42222 1 23457889999999999999998875211 4456777554 11444443 2332211 2 2
Q ss_pred cHHHHHHHHHHcCCCEEeecc
Q 012949 360 QSLPNILISLQMGISTVDCSV 380 (452)
Q Consensus 360 lA~ANaLaAl~aGa~~VD~Sv 380 (452)
...+++-+++|+++|=+|.
T Consensus 204 --~~~al~~i~aGa~RiG~S~ 222 (234)
T 1n7k_A 204 --GIDAVLAVGAGADIIGTSS 222 (234)
T ss_dssp --HHHHHHHHHTTCSEEEETT
T ss_pred --HHHHHHHHHcCccccchHH
Confidence 4667777799999886653
No 38
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=96.83 E-value=0.0073 Score=57.43 Aligned_cols=169 Identities=15% Similarity=0.121 Sum_probs=102.7
Q ss_pred CHHHHHHHHHHHHHCCCCEEEE----ecCCCCCcccccCCHHHHHHHHHhc--cCCceeE--Eecchhhhhhhhhhhhhc
Q 012949 146 PTGVKVELIRRLVSSGLPVVEA----TSFVSPKWVPQLADARDVMEAVRDL--EGARLPV--LTPNLKVILQRSILFQQC 217 (452)
Q Consensus 146 ~~~~k~~i~~~L~~~Gv~~IEv----G~~~s~~~~p~~~D~e~v~~~i~~~--~~~~l~~--l~~~~~~~i~r~~~~~~~ 217 (452)
+.....+-++.|.++|.+.+-+ |.|+ |.+.--.++++.+++. ++..+-+ ++-+..
T Consensus 15 D~~~l~~~i~~l~~~g~d~~h~DVmDg~Fv-----pn~~~G~~~v~~ir~~~~~~~~~dvhLmv~~p~------------ 77 (228)
T 3ovp_A 15 DLANLGAECLRMLDSGADYLHLDVMDGHFV-----PNITFGHPVVESLRKQLGQDPFFDMHMMVSKPE------------ 77 (228)
T ss_dssp CGGGHHHHHHHHHHTTCSCEEEEEEBSSSS-----SCBCBCHHHHHHHHHHHCSSSCEEEEEECSCGG------------
T ss_pred CchhHHHHHHHHHHcCCCEEEEEecCCCcC-----cccccCHHHHHHHHHhhCCCCcEEEEEEeCCHH------------
Confidence 4444556678888999996655 4544 4443334577777765 4444443 121111
Q ss_pred cchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCC
Q 012949 218 HASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVE 297 (452)
Q Consensus 218 ~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~ 297 (452)
+.++.++++|++.|.+-.-.. +.+.+.++.+|+.|.++.+.+. |
T Consensus 78 -------------~~i~~~~~aGad~itvH~Ea~----------------~~~~~~i~~i~~~G~k~gval~-----p-- 121 (228)
T 3ovp_A 78 -------------QWVKPMAVAGANQYTFHLEAT----------------ENPGALIKDIRENGMKVGLAIK-----P-- 121 (228)
T ss_dssp -------------GGHHHHHHHTCSEEEEEGGGC----------------SCHHHHHHHHHHTTCEEEEEEC-----T--
T ss_pred -------------HHHHHHHHcCCCEEEEccCCc----------------hhHHHHHHHHHHcCCCEEEEEc-----C--
Confidence 267888999999999864221 2234677888999998764432 2
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEE----cCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCC
Q 012949 298 GAIPPSKVAYVAKELHDMGCFEISL----GDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGI 373 (452)
Q Consensus 298 ~r~d~e~l~~~a~~l~~~Gad~I~L----~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa 373 (452)
.++.+.+.++. + .+|.|.+ +...|...-....+.|+.+++..+..+|++ |-|.-..|.-.++++||
T Consensus 122 -~t~~e~l~~~l----~-~~D~Vl~msv~pGf~Gq~f~~~~l~ki~~lr~~~~~~~I~V----dGGI~~~t~~~~~~aGA 191 (228)
T 3ovp_A 122 -GTSVEYLAPWA----N-QIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEV----DGGVGPDTVHKCAEAGA 191 (228)
T ss_dssp -TSCGGGTGGGG----G-GCSEEEEESSCTTTCSCCCCGGGHHHHHHHHHHCTTCEEEE----ESSCSTTTHHHHHHHTC
T ss_pred -CCCHHHHHHHh----c-cCCeEEEeeecCCCCCcccCHHHHHHHHHHHHhcCCCCEEE----eCCcCHHHHHHHHHcCC
Confidence 12344443333 2 2676654 223333222334455888888876656666 55666788999999999
Q ss_pred CEEe
Q 012949 374 STVD 377 (452)
Q Consensus 374 ~~VD 377 (452)
+.+=
T Consensus 192 d~~V 195 (228)
T 3ovp_A 192 NMIV 195 (228)
T ss_dssp CEEE
T ss_pred CEEE
Confidence 9653
No 39
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=96.81 E-value=0.013 Score=55.41 Aligned_cols=151 Identities=19% Similarity=0.175 Sum_probs=100.9
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHh-ccCCceeEEecchhhhhhhhhhhhhccchhhh
Q 012949 145 VPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRD-LEGARLPVLTPNLKVILQRSILFQQCHASVIS 223 (452)
Q Consensus 145 ~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~-~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~ 223 (452)
.+.++-+++++.|.+.|++.||+++-. | +..+.++.+++ .++..+.+-+ +
T Consensus 22 ~~~~~a~~~a~al~~gGi~~iEvt~~t-~-------~a~~~I~~l~~~~p~~~IGAGT-------------------V-- 72 (217)
T 3lab_A 22 DDLVHAIPMAKALVAGGVHLLEVTLRT-E-------AGLAAISAIKKAVPEAIVGAGT-------------------V-- 72 (217)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEEEETTS-T-------THHHHHHHHHHHCTTSEEEEEC-------------------C--
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCC-c-------cHHHHHHHHHHHCCCCeEeecc-------------------c--
Confidence 577889999999999999999998643 2 34455666654 4443332211 0
Q ss_pred hhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCC------cEEEEEEeeecCCCC
Q 012949 224 SNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSI------PVRGYVSCVVGCPVE 297 (452)
Q Consensus 224 ~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~------~V~~~l~~~~g~p~~ 297 (452)
.+.++++.++++|.+.|.-.. .+ .+++++|++.|+ .+..
T Consensus 73 ----lt~~~a~~ai~AGA~fivsP~-~~-------------------~evi~~~~~~~v~~~~~~~~~P----------- 117 (217)
T 3lab_A 73 ----CTADDFQKAIDAGAQFIVSPG-LT-------------------PELIEKAKQVKLDGQWQGVFLP----------- 117 (217)
T ss_dssp ----CSHHHHHHHHHHTCSEEEESS-CC-------------------HHHHHHHHHHHHHCSCCCEEEE-----------
T ss_pred ----cCHHHHHHHHHcCCCEEEeCC-Cc-------------------HHHHHHHHHcCCCccCCCeEeC-----------
Confidence 123589999999999884321 11 266788888887 6542
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHH---HHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCC
Q 012949 298 GAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTV---VPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGIS 374 (452)
Q Consensus 298 ~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v---~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~ 374 (452)
+-.+++++. .+.++|+|.|.+ .|.+. .++++.++.-+|.+++-.= =|....|.-..+.+|+.
T Consensus 118 G~~TptE~~----~A~~~Gad~vK~-------FPa~~~gG~~~lkal~~p~p~i~~~pt----GGI~~~N~~~~l~aGa~ 182 (217)
T 3lab_A 118 GVATASEVM----IAAQAGITQLKC-------FPASAIGGAKLLKAWSGPFPDIQFCPT----GGISKDNYKEYLGLPNV 182 (217)
T ss_dssp EECSHHHHH----HHHHTTCCEEEE-------TTTTTTTHHHHHHHHHTTCTTCEEEEB----SSCCTTTHHHHHHSTTB
T ss_pred CCCCHHHHH----HHHHcCCCEEEE-------CccccccCHHHHHHHHhhhcCceEEEe----CCCCHHHHHHHHHCCCE
Confidence 123455544 357899999976 34432 4789999988887666543 34445788889999974
No 40
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=96.81 E-value=0.077 Score=48.51 Aligned_cols=155 Identities=18% Similarity=0.181 Sum_probs=97.5
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhc-c-CCceeE-Eecchhhhhhhhhhhhhccchh
Q 012949 145 VPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDL-E-GARLPV-LTPNLKVILQRSILFQQCHASV 221 (452)
Q Consensus 145 ~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~-~-~~~l~~-l~~~~~~~i~r~~~~~~~~~~~ 221 (452)
.+.++-.++++.+.+.|++.||+.+.. + +..+.++.+++. + +..+.+ .+.+
T Consensus 19 ~~~~~~~~~~~~~~~~G~~~iev~~~~-~-------~~~~~i~~ir~~~~~~~~ig~~~v~~------------------ 72 (205)
T 1wa3_A 19 NSVEEAKEKALAVFEGGVHLIEITFTV-P-------DADTVIKELSFLKEKGAIIGAGTVTS------------------ 72 (205)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEETTS-T-------THHHHHHHTHHHHHTTCEEEEESCCS------------------
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCC-h-------hHHHHHHHHHHHCCCCcEEEecccCC------------------
Confidence 467888999999999999999997632 1 234456666653 2 332222 1111
Q ss_pred hhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCC
Q 012949 222 ISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIP 301 (452)
Q Consensus 222 i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d 301 (452)
.+.++.+.++|+|.| +. +..+ .++++++++.|+++...+ .+
T Consensus 73 --------~~~~~~a~~~Gad~i-v~-~~~~------------------~~~~~~~~~~g~~vi~g~-----------~t 113 (205)
T 1wa3_A 73 --------VEQCRKAVESGAEFI-VS-PHLD------------------EEISQFCKEKGVFYMPGV-----------MT 113 (205)
T ss_dssp --------HHHHHHHHHHTCSEE-EC-SSCC------------------HHHHHHHHHHTCEEECEE-----------CS
T ss_pred --------HHHHHHHHHcCCCEE-Ec-CCCC------------------HHHHHHHHHcCCcEECCc-----------CC
Confidence 237788899999999 33 2211 246678888999875211 13
Q ss_pred HHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEe
Q 012949 302 PSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVD 377 (452)
Q Consensus 302 ~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD 377 (452)
+.. ++.+.++|+|.|.+-.. .+. -.++++.+++.+|.+++..=.-=+ ..|....+++||+.|-
T Consensus 114 ~~e----~~~a~~~Gad~vk~~~~----~~~-g~~~~~~l~~~~~~~pvia~GGI~----~~~~~~~~~~Ga~~v~ 176 (205)
T 1wa3_A 114 PTE----LVKAMKLGHTILKLFPG----EVV-GPQFVKAMKGPFPNVKFVPTGGVN----LDNVCEWFKAGVLAVG 176 (205)
T ss_dssp HHH----HHHHHHTTCCEEEETTH----HHH-HHHHHHHHHTTCTTCEEEEBSSCC----TTTHHHHHHHTCSCEE
T ss_pred HHH----HHHHHHcCCCEEEEcCc----ccc-CHHHHHHHHHhCCCCcEEEcCCCC----HHHHHHHHHCCCCEEE
Confidence 443 44567899998876321 112 235677777777666665543333 3578888999998654
No 41
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=96.81 E-value=0.064 Score=52.97 Aligned_cols=201 Identities=18% Similarity=0.214 Sum_probs=111.3
Q ss_pred CCccEEEeCCc---cccCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecCC-CCCcccccCCHHHHHHHH----Hhcc--
Q 012949 124 PRFVKIVEVGP---RDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFV-SPKWVPQLADARDVMEAV----RDLE-- 193 (452)
Q Consensus 124 p~~V~I~D~TL---RDG~Q~~~~~~~~~~k~~i~~~L~~~Gv~~IEvG~~~-s~~~~p~~~D~e~v~~~i----~~~~-- 193 (452)
|.-.-|+.+|+ =||.+ .++.+..++.++.+.+.|.+.|++|.-+ .|. .+.+ +.++.++++ +.+.
T Consensus 23 ~~iMgilNvTPDSFsdgg~----~~~~~~a~~~a~~~v~~GAdiIDIGgeSTrPg-a~~v-~~~eE~~Rv~pvi~~l~~~ 96 (294)
T 2y5s_A 23 PLVMGILNATPDSFSDGGR----FLARDDALRRAERMIAEGADLLDIGGESTRPG-APPV-PLDEELARVIPLVEALRPL 96 (294)
T ss_dssp CEEEEEEECCC--------------CTTHHHHHHHHHHHTTCSEEEEESSCCSTT-CCCC-CHHHHHHHHHHHHHHHGGG
T ss_pred ceEEEEEeCCCCCCCCCCC----cCCHHHHHHHHHHHHHCCCCEEEECCCcCCCC-CCCC-CHHHHHHHHHHHHHHHhhC
Confidence 33345677776 45554 4678889999999999999999999743 232 1222 334444433 2332
Q ss_pred CCceeEEecchhhhhhhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHH
Q 012949 194 GARLPVLTPNLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAV 273 (452)
Q Consensus 194 ~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~ 273 (452)
++.+++=+.. .+-+++|+++|++.|.=....+ ..++
T Consensus 97 ~vpiSIDT~~--------------------------~~Va~aAl~aGa~iINdVsg~~------------------d~~m 132 (294)
T 2y5s_A 97 NVPLSIDTYK--------------------------PAVMRAALAAGADLINDIWGFR------------------QPGA 132 (294)
T ss_dssp CSCEEEECCC--------------------------HHHHHHHHHHTCSEEEETTTTC------------------STTH
T ss_pred CCeEEEECCC--------------------------HHHHHHHHHcCCCEEEECCCCC------------------chHH
Confidence 3333322211 2367889999998776332211 1245
Q ss_pred HHHHHhCCCcEEEEEEeeecCCCCC-----CC-C-----HHHHHHHHHHHHHCCcC--EEEEcCCcCCC---cH-HHHHH
Q 012949 274 AHAAKVLSIPVRGYVSCVVGCPVEG-----AI-P-----PSKVAYVAKELHDMGCF--EISLGDTIGVG---TP-GTVVP 336 (452)
Q Consensus 274 v~~Ak~~G~~V~~~l~~~~g~p~~~-----r~-d-----~e~l~~~a~~l~~~Gad--~I~L~DT~G~~---~P-~~v~~ 336 (452)
++.+++.|..+. ++..-|.|..- .+ + .+++.+.++.+.++|++ .|.| |. |++ ++ ++-.+
T Consensus 133 ~~~~a~~~~~vV--lmh~~G~p~tm~~~~~~y~dv~~ev~~~l~~~i~~a~~~Gi~~~~Iil-DP-G~Gf~kt~~~~n~~ 208 (294)
T 2y5s_A 133 IDAVRDGNSGLC--AMHMLGEPQTMQVGEPDYGDVVTDVRDFLAARAQALRDAGVAAERICV-DP-GFGFGKAVVDDNYA 208 (294)
T ss_dssp HHHHSSSSCEEE--EECCCEETTTTEECCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEE-EC-CTTSSSCTTHHHHH
T ss_pred HHHHHHhCCCEE--EECCCCCCccccccCCccccHHHHHHHHHHHHHHHHHHcCCChhhEEE-eC-CCcccccchHHHHH
Confidence 577788888765 55543333321 11 1 45677788888899986 6666 54 333 34 66677
Q ss_pred HHHHHHHh------CCCccEEEEeCC----------Cc-----CcHHHHHHHHHHcCCCEEee
Q 012949 337 MLEAVMAV------VPVEKLAVHLHD----------TY-----GQSLPNILISLQMGISTVDC 378 (452)
Q Consensus 337 li~~l~~~------~p~~~l~vH~Hn----------d~-----GlA~ANaLaAl~aGa~~VD~ 378 (452)
+++.+..- .++.|+-+=.-| +. ..-.|-+..|++.|+++|.+
T Consensus 209 ll~~l~~l~~~~~~~~g~Pvl~G~Srksfig~l~g~~~~~~R~~~t~a~~~~a~~~Ga~Ivrv 271 (294)
T 2y5s_A 209 LLAALPDTAPARPDGRAYPILAGMSRKSMLGAVIGGKPPLERVAASVAAALCAVERGAAIVRV 271 (294)
T ss_dssp HHHTGGGGSCBCTTSSBCCBEEECTTCHHHHTTTTSCCGGGCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHhccccCCCCCEEEEecccHHhhhhcCCCchhhhhHHHHHHHHHHHHcCCcEEEc
Confidence 77776542 223333332212 11 12345556677888887755
No 42
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=96.80 E-value=0.037 Score=54.76 Aligned_cols=199 Identities=15% Similarity=0.162 Sum_probs=111.9
Q ss_pred CccEEEeCCc---cccCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecCC-CCCcccccCCHHHHHHHH----Hhcc---
Q 012949 125 RFVKIVEVGP---RDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFV-SPKWVPQLADARDVMEAV----RDLE--- 193 (452)
Q Consensus 125 ~~V~I~D~TL---RDG~Q~~~~~~~~~~k~~i~~~L~~~Gv~~IEvG~~~-s~~~~p~~~D~e~v~~~i----~~~~--- 193 (452)
.-+-|+++|+ -||.+ .++.+..++.++.+.+.|.+.|++|.-+ .|.. +.. +.++.++++ +.+.
T Consensus 41 ~iMgilNvTPDSFsdgg~----~~~~~~a~~~a~~~v~~GAdiIDIGgeStrPga-~~v-~~~eE~~RvvpvI~~l~~~~ 114 (297)
T 1tx2_A 41 LIMGILNVTPDSFSDGGS----YNEVDAAVRHAKEMRDEGAHIIDIGGESTRPGF-AKV-SVEEEIKRVVPMIQAVSKEV 114 (297)
T ss_dssp EEEEECCCCCCTTCSSCB----HHHHHHHHHHHHHHHHTTCSEEEEESCC----C-CCC-CHHHHHHHHHHHHHHHHHHS
T ss_pred EEEEEEeCCCCccccCCc----cCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCC-CCC-CHHHHHHHHHHHHHHHHhcC
Confidence 3355677776 44443 4678899999999999999999999643 2321 112 333333322 3222
Q ss_pred CCceeEEecchhhhhhhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHH
Q 012949 194 GARLPVLTPNLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAV 273 (452)
Q Consensus 194 ~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~ 273 (452)
++.+++=+.. .+-+++|+++|++.|.=....+ ...++
T Consensus 115 ~vpiSIDT~~--------------------------~~V~~aAl~aGa~iINdvsg~~-----------------~d~~m 151 (297)
T 1tx2_A 115 KLPISIDTYK--------------------------AEVAKQAIEAGAHIINDIWGAK-----------------AEPKI 151 (297)
T ss_dssp CSCEEEECSC--------------------------HHHHHHHHHHTCCEEEETTTTS-----------------SCTHH
T ss_pred CceEEEeCCC--------------------------HHHHHHHHHcCCCEEEECCCCC-----------------CCHHH
Confidence 4444432221 2367888999999874322211 01244
Q ss_pred HHHHHhCCCcEEEEEEeeecCCCCCCCC-----HHHHHHHHHHHHHCCcC--EEEEcCCcCC---CcHHHHHHHHHHHHH
Q 012949 274 AHAAKVLSIPVRGYVSCVVGCPVEGAIP-----PSKVAYVAKELHDMGCF--EISLGDTIGV---GTPGTVVPMLEAVMA 343 (452)
Q Consensus 274 v~~Ak~~G~~V~~~l~~~~g~p~~~r~d-----~e~l~~~a~~l~~~Gad--~I~L~DT~G~---~~P~~v~~li~~l~~ 343 (452)
++.+++.|..+. ++..-|.|. . .+ .+++.+.++.+.++|++ .|.| |. |+ -+.++-.++++.+..
T Consensus 152 ~~~aa~~g~~vV--lmh~~G~p~-y-~d~v~ev~~~l~~~i~~a~~~GI~~~~Iil-DP-g~Gfgk~~~~n~~ll~~l~~ 225 (297)
T 1tx2_A 152 AEVAAHYDVPII--LMHNRDNMN-Y-RNLMADMIADLYDSIKIAKDAGVRDENIIL-DP-GIGFAKTPEQNLEAMRNLEQ 225 (297)
T ss_dssp HHHHHHHTCCEE--EECCCSCCC-C-SSHHHHHHHHHHHHHHHHHHTTCCGGGEEE-EC-CTTSSCCHHHHHHHHHTGGG
T ss_pred HHHHHHhCCcEE--EEeCCCCCC-c-chHHHHHHHHHHHHHHHHHHcCCChhcEEE-eC-CCCcCCCHHHHHHHHHHHHH
Confidence 566777887765 454333332 0 11 25677788888899987 6766 54 33 245666677776654
Q ss_pred hC-CCccEEEEeC--------------CCcCcHHHHHHHHHHcCCCEEee
Q 012949 344 VV-PVEKLAVHLH--------------DTYGQSLPNILISLQMGISTVDC 378 (452)
Q Consensus 344 ~~-p~~~l~vH~H--------------nd~GlA~ANaLaAl~aGa~~VD~ 378 (452)
-- .+.|+-+=.. +-..-.++.+..|+..||++|.+
T Consensus 226 l~~lg~Pvl~G~Srksfig~~~g~~~~~r~~~t~a~~~~a~~~ga~Ivrv 275 (297)
T 1tx2_A 226 LNVLGYPVLLGTSRKSFIGHVLDLPVEERLEGTGATVCLGIEKGCEFVRV 275 (297)
T ss_dssp GGGGCSCBEEECTTCHHHHHHHTCCGGGCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHhCCCCEEEEeccchhhhhhcCCCHHHhHHHHHHHHHHHHHCCCcEEEe
Confidence 21 1223333222 11222344666677888888876
No 43
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=96.80 E-value=0.017 Score=57.42 Aligned_cols=195 Identities=19% Similarity=0.187 Sum_probs=130.8
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEecchhhhhhhhhhhhhccchhhh
Q 012949 144 TVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVIS 223 (452)
Q Consensus 144 ~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~ 223 (452)
..+.+....+++...+.+-+.|--.+...-++. ..+.+...++......+++.+.. . .+
T Consensus 24 v~n~e~~~Ail~AAee~~sPvIlq~s~g~~~y~----g~~~~~~~v~~~a~~~VPValHl-D----------Hg------ 82 (305)
T 1rvg_A 24 VNNMEFLQAVLEAAEEQRSPVILALSEGAMKYG----GRALTLMAVELAKEARVPVAVHL-D----------HG------ 82 (305)
T ss_dssp CCSHHHHHHHHHHHHHTTCCEEEEEEHHHHHHH----HHHHHHHHHHHHHHCSSCEEEEE-E----------EE------
T ss_pred eCCHHHHHHHHHHHHHhCCCEEEECChhHHhhC----CHHHHHHHHHHHHhCCCcEEEEC-C----------CC------
Confidence 478899999999999999998776553211111 11222223332111333332210 0 01
Q ss_pred hhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCC------
Q 012949 224 SNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVE------ 297 (452)
Q Consensus 224 ~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~------ 297 (452)
...+.+.+|+++|..-|.+=.|. .+.||.++.-++++++|+..|+.|.+.|-..-|.++.
T Consensus 83 ----~~~e~~~~ai~~GFtSVMiDgS~----------~p~eENi~~Tk~vv~~ah~~gvsVEaELG~vgg~Ed~~~~~~~ 148 (305)
T 1rvg_A 83 ----SSYESVLRALRAGFTSVMIDKSH----------EDFETNVRETRRVVEAAHAVGVTVEAELGRLAGIEEHVAVDEK 148 (305)
T ss_dssp ----CSHHHHHHHHHTTCSEEEECCTT----------SCHHHHHHHHHHHHHHHHHTTCEEEEEESCCCCSCC------C
T ss_pred ----CCHHHHHHHHHcCCCeeeeCCCC----------CCHHHHHHHHHHHHHHHHHcCCEEEEEEeeccCccCCcccccc
Confidence 02357889999999988764442 2568999999999999999999999988876544542
Q ss_pred --CCCCHHHHHHHHHHHHHCCcCEEEEc--CCcCCCc----HHHHHHHHHHHHHhCCCccEEEEeCC-------------
Q 012949 298 --GAIPPSKVAYVAKELHDMGCFEISLG--DTIGVGT----PGTVVPMLEAVMAVVPVEKLAVHLHD------------- 356 (452)
Q Consensus 298 --~r~d~e~l~~~a~~l~~~Gad~I~L~--DT~G~~~----P~~v~~li~~l~~~~p~~~l~vH~Hn------------- 356 (452)
-.++|+...+++++. |+|.+.++ -+=|.-. |.-=.++++.+++.+| +||.+|.=.
T Consensus 149 ~~~yT~Peea~~Fv~~T---gvD~LAvaiGt~HG~Yk~~g~p~L~~~~L~~I~~~~~-vpLVlHGgSsv~~~~~~~~~~~ 224 (305)
T 1rvg_A 149 DALLTNPEEARIFMERT---GADYLAVAIGTSHGAYKGKGRPFIDHARLERIARLVP-APLVLHGASAVPPELVERFRAS 224 (305)
T ss_dssp CTTCCCHHHHHHHHHHH---CCSEEEECSSCCSSSBCSSSSCCCCHHHHHHHHHHCC-SCEEECSCCCCCHHHHHHHHHT
T ss_pred ccccCCHHHHHHHHHHH---CCCEEEEecCccccccCCCCCCccCHHHHHHHHHhcC-CCEEEeCCCCCcHHHHHHHHhh
Confidence 147899888888664 89965554 3334333 3333577888888888 689999866
Q ss_pred ------CcCcHHHHHHHHHHcCCCEEe
Q 012949 357 ------TYGQSLPNILISLQMGISTVD 377 (452)
Q Consensus 357 ------d~GlA~ANaLaAl~aGa~~VD 377 (452)
++|........|+..|+.-|+
T Consensus 225 gg~~~~~~G~p~e~i~~ai~~GV~KiN 251 (305)
T 1rvg_A 225 GGEIGEAAGIHPEDIKKAISLGIAKIN 251 (305)
T ss_dssp TCCCCSCBCCCHHHHHHHHHTTEEEEE
T ss_pred ccccccCCCCCHHHHHHHHHCCCeEEE
Confidence 568888899999999987554
No 44
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=96.80 E-value=0.034 Score=55.59 Aligned_cols=195 Identities=14% Similarity=0.166 Sum_probs=126.3
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhc-cC-CceeEEecchhhhhhhhhhhhhccchh
Q 012949 144 TVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDL-EG-ARLPVLTPNLKVILQRSILFQQCHASV 221 (452)
Q Consensus 144 ~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~-~~-~~l~~l~~~~~~~i~r~~~~~~~~~~~ 221 (452)
..+.+....+++...+.+-+.|--.+...-++.+ .+.+...++.. .. ..+++.+.. . .+
T Consensus 25 v~n~e~~~Ail~AAee~~sPvIlq~s~g~~~y~g----~~~~~~~v~~aa~~~~~VPValHl-D----------Hg---- 85 (323)
T 2isw_A 25 VNNMEQIQGIMKAVVQLKSPVILQCSRGALKYSD----MIYLKKLCEAALEKHPDIPICIHL-D----------HG---- 85 (323)
T ss_dssp CCSHHHHHHHHHHHHHTTCCEEEEEEHHHHHHTT----THHHHHHHHHHHHHCTTSCEEEEE-E----------EE----
T ss_pred eCCHHHHHHHHHHHHHhCCCEEEECChhHHHhCC----HHHHHHHHHHHHHhcCCCcEEEEC-C----------CC----
Confidence 4788999999999999999987665432111111 12222333221 11 233332210 0 01
Q ss_pred hhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCC----
Q 012949 222 ISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVE---- 297 (452)
Q Consensus 222 i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~---- 297 (452)
...+.+..++++|..-|.+=.|. .+.||.++.-++++++|+..|+.|.+.|-..-|.++.
T Consensus 86 ------~~~e~i~~ai~~GFtSVMiDgS~----------~p~eENi~~Tk~vv~~ah~~gvsVEaELG~vgg~Ed~v~~~ 149 (323)
T 2isw_A 86 ------DTLESVKMAIDLGFSSVMIDASH----------HPFDENVRITKEVVAYAHARSVSVEAELGTLGGIEEDVQNT 149 (323)
T ss_dssp ------CSHHHHHHHHHTTCSEEEECCTT----------SCHHHHHHHHHHHHHHHHTTTCEEEEEESCC----------
T ss_pred ------CCHHHHHHHHHcCCCeEEecCCC----------CCHHHHHHHHHHHHHHHHHcCCeEEEEeCCccCCccCcccc
Confidence 02357889999999988764442 2568999999999999999999999888876444532
Q ss_pred -CCCCHHHHHHHHHHHHHCCcCEEEEc--CCcCCCc----HH--HHHHHHHHHHHhCCCccEEEEeCC------------
Q 012949 298 -GAIPPSKVAYVAKELHDMGCFEISLG--DTIGVGT----PG--TVVPMLEAVMAVVPVEKLAVHLHD------------ 356 (452)
Q Consensus 298 -~r~d~e~l~~~a~~l~~~Gad~I~L~--DT~G~~~----P~--~v~~li~~l~~~~p~~~l~vH~Hn------------ 356 (452)
..++|+...+++++ .|+|.+.++ -.=|.-. |. -=.++++.+++.++ +||.+|+=.
T Consensus 150 ~~yTdPeea~~Fv~~---TgvD~LAvaiGt~HG~Yk~~~~p~~~L~~~~L~~I~~~~~-vpLVlHGgSsvp~~~~~~~~~ 225 (323)
T 2isw_A 150 VQLTEPQDAKKFVEL---TGVDALAVAIGTSHGAYKFKSESDIRLAIDRVKTISDLTG-IPLVMHGSSSVPKDVKDMINK 225 (323)
T ss_dssp CCCCCHHHHHHHHHH---HCCSEEEECSSCCSSSBCCCC----CCCCHHHHHHHHHHC-SCEEECSCCCCCHHHHHHHHH
T ss_pred cccCCHHHHHHHHHH---HCCCEEEEecCccccccCCCCCcccccCHHHHHHHHHHhC-CCeEEECCCCCCHHHHHHHHH
Confidence 24899998888875 489966554 3334322 33 11367788888775 689999944
Q ss_pred -------CcCcHHHHHHHHHHcCCCEEe
Q 012949 357 -------TYGQSLPNILISLQMGISTVD 377 (452)
Q Consensus 357 -------d~GlA~ANaLaAl~aGa~~VD 377 (452)
+.|........|+..|+.-|+
T Consensus 226 ~gg~~~~~~Gvp~e~i~~ai~~GV~KiN 253 (323)
T 2isw_A 226 YGGKMPDAVGVPIESIVHAIGEGVCKIN 253 (323)
T ss_dssp TTCCCTTCBCCCHHHHHHHHHTTEEEEE
T ss_pred hccccccCCCCCHHHHHHHHHCCCeEEE
Confidence 889999999999999987654
No 45
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=96.80 E-value=0.018 Score=54.22 Aligned_cols=173 Identities=17% Similarity=0.173 Sum_probs=103.2
Q ss_pred HHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeE--Eecchhhhhhhhhhhhhccchhhhh
Q 012949 147 TGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPV--LTPNLKVILQRSILFQQCHASVISS 224 (452)
Q Consensus 147 ~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~--l~~~~~~~i~r~~~~~~~~~~~i~~ 224 (452)
...-.+.++.+.+.|++.|++...-. .++|.+....+..+.+++..+..+.+ ++-+..
T Consensus 18 ~~~l~~~i~~~~~~Gad~i~l~i~Dg-~fv~~~~~~~~~~~~lr~~~~~~~~v~lmv~d~~------------------- 77 (228)
T 1h1y_A 18 FANLAAEADRMVRLGADWLHMDIMDG-HFVPNLTIGAPVIQSLRKHTKAYLDCHLMVTNPS------------------- 77 (228)
T ss_dssp GGGHHHHHHHHHHTTCSEEEEEEEBS-SSSSCBCBCHHHHHHHHTTCCSEEEEEEESSCGG-------------------
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEecC-CcCcchhhCHHHHHHHHhhcCCcEEEEEEecCHH-------------------
Confidence 34446677888999999999973110 01232222235566676654433332 221111
Q ss_pred hhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHH
Q 012949 225 NLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSK 304 (452)
Q Consensus 225 ~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~ 304 (452)
+.++.++++|++.|.+....++. . +.+.++.+++.|+++...+. | . ++.+.
T Consensus 78 ------~~i~~~~~agad~v~vH~~~~~~------------~---~~~~~~~i~~~g~~igv~~~-----p-~--t~~e~ 128 (228)
T 1h1y_A 78 ------DYVEPLAKAGASGFTFHIEVSRD------------N---WQELIQSIKAKGMRPGVSLR-----P-G--TPVEE 128 (228)
T ss_dssp ------GGHHHHHHHTCSEEEEEGGGCTT------------T---HHHHHHHHHHTTCEEEEEEC-----T-T--SCGGG
T ss_pred ------HHHHHHHHcCCCEEEECCCCccc------------H---HHHHHHHHHHcCCCEEEEEe-----C-C--CCHHH
Confidence 26888899999999887654431 1 13556777888988763221 1 1 22333
Q ss_pred HHHHHHHHHHC--CcCEEEEcCCc-----CCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEe
Q 012949 305 VAYVAKELHDM--GCFEISLGDTI-----GVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVD 377 (452)
Q Consensus 305 l~~~a~~l~~~--Gad~I~L~DT~-----G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD 377 (452)
+ +.+.+. ++|.|.+ +|+ |.-.+....+.++.+++..+..++.+ +-|....|.-.++++|||.|=
T Consensus 129 ~----~~~~~~~~~~d~vl~-~sv~pg~~g~~~~~~~l~~i~~~~~~~~~~pi~v----~GGI~~~ni~~~~~aGaD~vv 199 (228)
T 1h1y_A 129 V----FPLVEAENPVELVLV-MTVEPGFGGQKFMPEMMEKVRALRKKYPSLDIEV----DGGLGPSTIDVAASAGANCIV 199 (228)
T ss_dssp G----HHHHHSSSCCSEEEE-ESSCTTCSSCCCCGGGHHHHHHHHHHCTTSEEEE----ESSCSTTTHHHHHHHTCCEEE
T ss_pred H----HHHHhcCCCCCEEEE-EeecCCCCcccCCHHHHHHHHHHHHhcCCCCEEE----ECCcCHHHHHHHHHcCCCEEE
Confidence 3 334454 7898887 333 33345556667888888775556654 457777788888999998653
No 46
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=96.77 E-value=0.045 Score=54.09 Aligned_cols=206 Identities=17% Similarity=0.219 Sum_probs=106.2
Q ss_pred CccEEEeCCccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecCC-CCC--cccccCCHHHHHHHHHhcc--CCceeE
Q 012949 125 RFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFV-SPK--WVPQLADARDVMEAVRDLE--GARLPV 199 (452)
Q Consensus 125 ~~V~I~D~TLRDG~Q~~~~~~~~~~k~~i~~~L~~~Gv~~IEvG~~~-s~~--~~p~~~D~e~v~~~i~~~~--~~~l~~ 199 (452)
.-.-|+.+|+ |-..--+..++.+..++.++.+.+.|-+.|++|.-+ .|. .++.-.+.+.+...++.+. ++.+++
T Consensus 30 ~iMGIlNvTP-DSFsdgg~~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~~vpiSI 108 (294)
T 2dqw_A 30 RLLGVLNLTP-DSFSDGGRYLDPERALERAREMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSLGVPVSV 108 (294)
T ss_dssp EEEEEEECCC--------------CCHHHHHHHHHHTCSEEEEECC-----------CCHHHHHHHHHHHHHTTCSCEEE
T ss_pred eEEEEEeCCC-CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhCCCeEEE
Confidence 3345677776 333332334677888999999999999999999733 232 1111111222333344433 333332
Q ss_pred EecchhhhhhhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHh
Q 012949 200 LTPNLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKV 279 (452)
Q Consensus 200 l~~~~~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~ 279 (452)
=+.. .+-+++|+++|++.|. ++|-. ...++++.+++
T Consensus 109 DT~~--------------------------~~Va~aAl~aGa~iIN---dVsg~---------------~d~~m~~v~a~ 144 (294)
T 2dqw_A 109 DTRK--------------------------PEVAEEALKLGAHLLN---DVTGL---------------RDERMVALAAR 144 (294)
T ss_dssp ECSC--------------------------HHHHHHHHHHTCSEEE---CSSCS---------------CCHHHHHHHHH
T ss_pred ECCC--------------------------HHHHHHHHHhCCCEEE---ECCCC---------------CChHHHHHHHH
Confidence 2221 2367889999999654 22221 01244566778
Q ss_pred CCCcEEEEEEeee-cCCCCC----CCC------HHHHHHHHHHHHHCCcCEEEEcCC-cCCCc-HHHHHHHHHHHHHhC-
Q 012949 280 LSIPVRGYVSCVV-GCPVEG----AIP------PSKVAYVAKELHDMGCFEISLGDT-IGVGT-PGTVVPMLEAVMAVV- 345 (452)
Q Consensus 280 ~G~~V~~~l~~~~-g~p~~~----r~d------~e~l~~~a~~l~~~Gad~I~L~DT-~G~~~-P~~v~~li~~l~~~~- 345 (452)
.|..+. ++..- |.|..- .++ .+++.+.++.+.++|++.|.| |. +|... .++-.++++.++.-.
T Consensus 145 ~~~~vV--lmh~~eG~p~tm~~~~~y~dv~~ev~~~l~~~i~~a~~~Gi~~Iil-DPG~Gf~kt~~~n~~ll~~l~~~~~ 221 (294)
T 2dqw_A 145 HGVAAV--VMHMPVPDPATMMAHARYRDVVAEVKAFLEAQARRALSAGVPQVVL-DPGFGFGKLLEHNLALLRRLDEIVA 221 (294)
T ss_dssp HTCEEE--EECCSSSCTTTGGGGCCCSSHHHHHHHHHHHHHHHHHHTTCSCEEE-ECCTTSSCCHHHHHHHHHTHHHHHT
T ss_pred hCCCEE--EEcCCCCCCccccccCccccHHHHHHHHHHHHHHHHHHCCCCcEEE-cCCCCcccCHHHHHHHHHHHHHHhc
Confidence 887765 55532 333210 011 346777788889999987776 54 34443 667777877776531
Q ss_pred CCccEEEEeCC--------------C-cCcHHHHHHHHHHcCCCEEee
Q 012949 346 PVEKLAVHLHD--------------T-YGQSLPNILISLQMGISTVDC 378 (452)
Q Consensus 346 p~~~l~vH~Hn--------------d-~GlA~ANaLaAl~aGa~~VD~ 378 (452)
++.|+-+=.-| + .....|-+..|++.|+++|.+
T Consensus 222 ~g~Pvl~G~Srksfig~l~g~p~~~~R~~~t~a~~~~a~~~Ga~IvRv 269 (294)
T 2dqw_A 222 LGHPVLVGLSRKRTIGELSGVEDPAQRVHGSVAAHLFAVMKGVRLLRV 269 (294)
T ss_dssp TSSCBEECCTTCHHHHHHHTCCSGGGCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCEEEEeccchhhhhhcCCCchhhhHHHHHHHHHHHHHcCCcEEEc
Confidence 33333331111 1 112235666777888877654
No 47
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=96.75 E-value=0.068 Score=52.89 Aligned_cols=137 Identities=12% Similarity=0.047 Sum_probs=94.2
Q ss_pred hHHHHHHcCCCEEEEEecC-ChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCH-HHHHHHH
Q 012949 232 GFEAAIAAGAKEVAIFASA-SEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPP-SKVAYVA 309 (452)
Q Consensus 232 ~ie~a~~~Gi~~V~i~~s~-Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~-e~l~~~a 309 (452)
.++.|++.|++.|.+.+.. ++ .+..+.++.+.++++.|++.|+++.+.+- ..|.......++ +.+.+.+
T Consensus 113 ~ve~a~~~GAdaV~vlv~~~~d--------~~~~~~~~~i~~v~~~~~~~G~p~lv~~~-~~g~~v~~~~~~~~~v~~aa 183 (304)
T 1to3_A 113 NAQAVKRDGAKALKLLVLWRSD--------EDAQQRLNMVKEFNELCHSNGLLSIIEPV-VRPPRCGDKFDREQAIIDAA 183 (304)
T ss_dssp CHHHHHHTTCCEEEEEEEECTT--------SCHHHHHHHHHHHHHHHHTTTCEEEEEEE-ECCCSSCSCCCHHHHHHHHH
T ss_pred hHHHHHHcCCCEEEEEEEcCCC--------ccHHHHHHHHHHHHHHHHHcCCcEEEEEE-CCCCccccCCChhHHHHHHH
Confidence 7899999999988754421 21 12357789999999999999999875532 222222222456 8888889
Q ss_pred HHHHHCCcCEEEEcCC-cCCCcHHHHHHHHHHHHHhCCCcc-EEEEeCCCcCcHHHHHHHHHHcCCCEEee
Q 012949 310 KELHDMGCFEISLGDT-IGVGTPGTVVPMLEAVMAVVPVEK-LAVHLHDTYGQSLPNILISLQMGISTVDC 378 (452)
Q Consensus 310 ~~l~~~Gad~I~L~DT-~G~~~P~~v~~li~~l~~~~p~~~-l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~ 378 (452)
+.+.++|+|.|.+.=+ .|...++.+.++++......+. | |.+=.=.+.-..+.+.-.|+++|++.|-+
T Consensus 184 ~~a~~lGaD~iKv~~~~~~~g~~~~~~~vv~~~~~~~~~-P~Vv~aGG~~~~~~~~~~~~a~~aGa~Gv~v 253 (304)
T 1to3_A 184 KELGDSGADLYKVEMPLYGKGARSDLLTASQRLNGHINM-PWVILSSGVDEKLFPRAVRVAMEAGASGFLA 253 (304)
T ss_dssp HHHTTSSCSEEEECCGGGGCSCHHHHHHHHHHHHHTCCS-CEEECCTTSCTTTHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHcCCCEEEeCCCcCCCCCHHHHHHHHHhccccCCC-CeEEEecCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 9999999999887553 2334788888888876554332 4 33322225556678888999999976543
No 48
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=96.72 E-value=0.0038 Score=59.26 Aligned_cols=172 Identities=19% Similarity=0.195 Sum_probs=103.3
Q ss_pred HHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeE--Eecchhhhhhhhhhhhhccchhhhh
Q 012949 147 TGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPV--LTPNLKVILQRSILFQQCHASVISS 224 (452)
Q Consensus 147 ~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~--l~~~~~~~i~r~~~~~~~~~~~i~~ 224 (452)
...-.+.++.+.+.|++.++++..-. .++|.+....++.+.+++..+..+-+ ++-+..
T Consensus 16 ~~~l~~~i~~~~~~Gad~ihldi~DG-~fvp~~~~g~~~v~~lr~~~~~~~~vhlmv~dp~------------------- 75 (230)
T 1tqj_A 16 FSRLGEEIKAVDEAGADWIHVDVMDG-RFVPNITIGPLIVDAIRPLTKKTLDVHLMIVEPE------------------- 75 (230)
T ss_dssp GGGHHHHHHHHHHTTCSEEEEEEEBS-SSSSCBCBCHHHHHHHGGGCCSEEEEEEESSSGG-------------------
T ss_pred HhHHHHHHHHHHHcCCCEEEEEEEec-CCCcchhhhHHHHHHHHhhcCCcEEEEEEccCHH-------------------
Confidence 44556778889999999999975311 13444443346777787765544432 221111
Q ss_pred hhhccHHhHHHHHHcCCCEEEEEec--CChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCH
Q 012949 225 NLWVYLQGFEAAIAAGAKEVAIFAS--ASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPP 302 (452)
Q Consensus 225 ~~~~~~~~ie~a~~~Gi~~V~i~~s--~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~ 302 (452)
+.++.++++|++.|.+..- ..+ ...+.++.+++.|+.+...+. |. ++.
T Consensus 76 ------~~i~~~~~aGadgv~vh~e~~~~~----------------~~~~~~~~i~~~g~~~gv~~~-----p~---t~~ 125 (230)
T 1tqj_A 76 ------KYVEDFAKAGADIISVHVEHNASP----------------HLHRTLCQIRELGKKAGAVLN-----PS---TPL 125 (230)
T ss_dssp ------GTHHHHHHHTCSEEEEECSTTTCT----------------THHHHHHHHHHTTCEEEEEEC-----TT---CCG
T ss_pred ------HHHHHHHHcCCCEEEECcccccch----------------hHHHHHHHHHHcCCcEEEEEe-----CC---CcH
Confidence 2678899999999988764 333 123667888999998764331 21 122
Q ss_pred HHHHHHHHHHHHCCcCEEEEc----CCcCCCcHHHHHHHHHHHHHhCC----CccEEEEeCCCcCcHHHHHHHHHHcCCC
Q 012949 303 SKVAYVAKELHDMGCFEISLG----DTIGVGTPGTVVPMLEAVMAVVP----VEKLAVHLHDTYGQSLPNILISLQMGIS 374 (452)
Q Consensus 303 e~l~~~a~~l~~~Gad~I~L~----DT~G~~~P~~v~~li~~l~~~~p----~~~l~vH~Hnd~GlA~ANaLaAl~aGa~ 374 (452)
+.+..+. .++|.|.+. -+.|.-.+....+.++.+++..+ ..+|.+ +.|.-..|+-...++||+
T Consensus 126 e~~~~~~-----~~~D~v~~msv~pg~ggq~~~~~~~~~i~~lr~~~~~~~~~~~I~v----~GGI~~~~~~~~~~aGad 196 (230)
T 1tqj_A 126 DFLEYVL-----PVCDLILIMSVNPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEV----DGGLKPNNTWQVLEAGAN 196 (230)
T ss_dssp GGGTTTG-----GGCSEEEEESSCC----CCCCGGGHHHHHHHHHHHHHHTCCCEEEE----ESSCCTTTTHHHHHHTCC
T ss_pred HHHHHHH-----hcCCEEEEEEeccccCCccCcHHHHHHHHHHHHHHHhcCCCCcEEE----ECCcCHHHHHHHHHcCCC
Confidence 3332222 267866432 22233334455566666666552 346666 678878888889999998
Q ss_pred EEe
Q 012949 375 TVD 377 (452)
Q Consensus 375 ~VD 377 (452)
.|=
T Consensus 197 ~vv 199 (230)
T 1tqj_A 197 AIV 199 (230)
T ss_dssp EEE
T ss_pred EEE
Confidence 653
No 49
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=96.67 E-value=0.18 Score=47.49 Aligned_cols=180 Identities=15% Similarity=0.138 Sum_probs=100.6
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecCCC-CCc----cccc--------CCH---HHHHHHHHhccCCceeEEe-cchhh
Q 012949 144 TVPTGVKVELIRRLVSSGLPVVEATSFVS-PKW----VPQL--------ADA---RDVMEAVRDLEGARLPVLT-PNLKV 206 (452)
Q Consensus 144 ~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s-~~~----~p~~--------~D~---e~v~~~i~~~~~~~l~~l~-~~~~~ 206 (452)
.++.+.-.++++.|.+. ++.||++.|.+ |.. ++.. .+. .++++.+++..+..+.++. .+..
T Consensus 15 ~~~~~~~~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~~~pv~~~~~~~~~- 92 (248)
T 1geq_A 15 DPDKQSTLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHSSTPIVLMTYYNPI- 92 (248)
T ss_dssp SSCHHHHHHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTCCCCEEEEECHHHH-
T ss_pred CCCHHHHHHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhCCCCEEEEeccchh-
Confidence 34557889999999999 99999996533 221 0100 011 2334444433333333222 1100
Q ss_pred hhhhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEE
Q 012949 207 ILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRG 286 (452)
Q Consensus 207 ~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~ 286 (452)
|. ....+.++.++++|++.|.+..-.. +...+++++++++|.++..
T Consensus 93 -------~~-----------~~~~~~~~~~~~~Gad~v~~~~~~~----------------~~~~~~~~~~~~~g~~~~~ 138 (248)
T 1geq_A 93 -------YR-----------AGVRNFLAEAKASGVDGILVVDLPV----------------FHAKEFTEIAREEGIKTVF 138 (248)
T ss_dssp -------HH-----------HCHHHHHHHHHHHTCCEEEETTCCG----------------GGHHHHHHHHHHHTCEEEE
T ss_pred -------hh-----------cCHHHHHHHHHHCCCCEEEECCCCh----------------hhHHHHHHHHHHhCCCeEE
Confidence 00 0113488999999999999863211 2234677888899988653
Q ss_pred EEEeeecCCCCCCCCHHHHHHHHHHHHHCCcC-EEEEcCCcCCC-----cHHHHHHHHHHHHHhCCCccEEEEeCCCcCc
Q 012949 287 YVSCVVGCPVEGAIPPSKVAYVAKELHDMGCF-EISLGDTIGVG-----TPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQ 360 (452)
Q Consensus 287 ~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad-~I~L~DT~G~~-----~P~~v~~li~~l~~~~p~~~l~vH~Hnd~Gl 360 (452)
.++ | .++.+.+..+... ++ .|++....|.. .+....++++.+++... .+|.+ .-|.
T Consensus 139 ~i~-----~---~t~~e~~~~~~~~-----~d~~i~~~~~~G~~g~~~~~~~~~~~~i~~l~~~~~-~pi~~----~GGI 200 (248)
T 1geq_A 139 LAA-----P---NTPDERLKVIDDM-----TTGFVYLVSLYGTTGAREEIPKTAYDLLRRAKRICR-NKVAV----GFGV 200 (248)
T ss_dssp EEC-----T---TCCHHHHHHHHHH-----CSSEEEEECCC-------CCCHHHHHHHHHHHHHCS-SCEEE----ESCC
T ss_pred EEC-----C---CCHHHHHHHHHhc-----CCCeEEEEECCccCCCCCCCChhHHHHHHHHHhhcC-CCEEE----Eeec
Confidence 221 1 1233333333322 45 66555544422 23456678888888653 34443 4566
Q ss_pred HH-HHHHHHHHcCCCEEe
Q 012949 361 SL-PNILISLQMGISTVD 377 (452)
Q Consensus 361 A~-ANaLaAl~aGa~~VD 377 (452)
.. .|....+.+||+.|-
T Consensus 201 ~~~e~i~~~~~~Gad~vi 218 (248)
T 1geq_A 201 SKREHVVSLLKEGANGVV 218 (248)
T ss_dssp CSHHHHHHHHHTTCSEEE
T ss_pred CCHHHHHHHHHcCCCEEE
Confidence 66 777777799998664
No 50
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=96.64 E-value=0.19 Score=47.31 Aligned_cols=172 Identities=15% Similarity=0.195 Sum_probs=95.1
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHH--HHhCCCcEEEEEEeeecCCCCCCCCHHHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHA--AKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYV 308 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~--Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~ 308 (452)
+.++.|.+.|++.|.+...... ...+.++.++++.+.++. +++.|+.+ .+....+.+..--.+++.+.++
T Consensus 93 ~~i~~A~~lGa~~v~~~~g~~~------~~~~~~~~~~~~~~~l~~l~a~~~gv~l--~lEn~~~~~~~~~~~~~~~~~l 164 (285)
T 1qtw_A 93 DEMQRCEQLGLSLLNFHPGSHL------MQISEEDCLARIAESINIALDKTQGVTA--VIENTAGQGSNLGFKFEHLAAI 164 (285)
T ss_dssp HHHHHHHHTTCCEEEECCCBCT------TTSCHHHHHHHHHHHHHHHHHHCSSCEE--EEECCCCCTTBCCSSHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECcCCCC------CCCCHHHHHHHHHHHHHHHHhccCCCEE--EEecCCCCCCcccCCHHHHHHH
Confidence 4778888999999977544211 112556666665555443 34456554 3543221111112367777777
Q ss_pred HHHHHHCCcCEEEEcCC-----cC--CCcHHHHHHHHHHHHHhCC-CccEEEEeCCCcCcHHHHHHHHHHcCCCEEeecc
Q 012949 309 AKELHDMGCFEISLGDT-----IG--VGTPGTVVPMLEAVMAVVP-VEKLAVHLHDTYGQSLPNILISLQMGISTVDCSV 380 (452)
Q Consensus 309 a~~l~~~Gad~I~L~DT-----~G--~~~P~~v~~li~~l~~~~p-~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~Sv 380 (452)
++.+.+..--.+++ || .| ...|..+.+.++.+.+.++ +-...+|+||..+-- |.. -|- -
T Consensus 165 ~~~v~~~~~~g~~~-D~~H~~~~g~~~~~~~~~~~~~~~~~~~~g~~~i~~vH~~D~~~~~----------~~~-~~~-h 231 (285)
T 1qtw_A 165 IDGVEDKSRVGVCI-DTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKSTF----------GSR-VDR-H 231 (285)
T ss_dssp HHHCSCGGGEEEEE-EHHHHHHHTCCCSSHHHHHHHHHHHHHHTCGGGEEEEEECEESSCT----------TCC-CCC-E
T ss_pred HHhhcCccceEEEE-EhHhHHHcCCCcCChHHHHHHHHHHHHhcCccceeEEEEecCCCcc----------cCC-ccc-c
Confidence 76551111113333 66 23 2345567778888877665 444689999876420 100 000 0
Q ss_pred cCCCCCCCCCCCCCcccHHHHHHHHHcCCCCC------CCChhhHHHHHHHHHHHhC
Q 012949 381 AGLGGCPYAKGASGNVATEDVVYMLSGLGVET------NVDLRKLMLAGDFINKHLG 431 (452)
Q Consensus 381 ~GlGecP~a~graGNaalE~vv~~L~~~Gi~t------~iDl~~L~~la~~v~~~~g 431 (452)
..+| .|..+.+.++..|+..|++- -.+.+.+.+..+++.+...
T Consensus 232 ~~~G--------~G~id~~~~~~~L~~~gy~g~~~~lE~~~~~~~~~s~~~lr~~~~ 280 (285)
T 1qtw_A 232 HSLG--------EGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQT 280 (285)
T ss_dssp ECTT--------TSSSCSHHHHHHHTCGGGTTSEEEECCSCGGGHHHHHHHHHHHTT
T ss_pred cCCC--------CCCCCHHHHHHHHhccCcCCCCEEEecCCCcchHHHHHHHHHHHh
Confidence 1122 47899999999998755421 0144566676777776653
No 51
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=96.62 E-value=0.087 Score=49.39 Aligned_cols=214 Identities=14% Similarity=0.074 Sum_probs=112.3
Q ss_pred HHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEecchhhhhhhhhhhhhccchhhhhhhhccH
Q 012949 151 VELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLWVYL 230 (452)
Q Consensus 151 ~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~~~~ 230 (452)
.+.++.+.++|++.||+.......+...-.+.+++.+.++. .++++..+..... +........+ ...
T Consensus 22 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~-~gl~~~~~~~~~~--------~~~~~~~~~~----~~~ 88 (272)
T 2q02_A 22 EAFFRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEK-YGLEIVTINAVYP--------FNQLTEEVVK----KTE 88 (272)
T ss_dssp HHHHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHH-TTCEEEEEEEETT--------TTSCCHHHHH----HHH
T ss_pred HHHHHHHHHcCCCEEEeeccccccccccccCHHHHHHHHHH-cCCeEEechhhhc--------cCCcHHHHHH----HHH
Confidence 45566778899999999742110011011345566555554 3566644432111 1111111111 123
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHH-HHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDS-LVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVA 309 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~-l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a 309 (452)
+.++.|.+.|++.|.+...... ....+.. .+.+.++.++|++.|+++. +... +.+...-.+++.+.+++
T Consensus 89 ~~i~~a~~lG~~~v~~~~g~~~-------~~~~~~~~~~~l~~l~~~a~~~gv~l~--~E~~-~~~~~~~~~~~~~~~l~ 158 (272)
T 2q02_A 89 GLLRDAQGVGARALVLCPLNDG-------TIVPPEVTVEAIKRLSDLFARYDIQGL--VEPL-GFRVSSLRSAVWAQQLI 158 (272)
T ss_dssp HHHHHHHHHTCSEEEECCCCSS-------BCCCHHHHHHHHHHHHHHHHTTTCEEE--ECCC-CSTTCSCCCHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEccCCCc-------hhHHHHHHHHHHHHHHHHHHHcCCEEE--EEec-CCCcccccCHHHHHHHH
Confidence 5788899999999988543211 0334566 7888899999999998754 3321 11111224677777777
Q ss_pred HHHHHCCcCEEEEcCCcCCCc--HHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEeecccCCCCCC
Q 012949 310 KELHDMGCFEISLGDTIGVGT--PGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCSVAGLGGCP 387 (452)
Q Consensus 310 ~~l~~~Gad~I~L~DT~G~~~--P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~Sv~GlGecP 387 (452)
+.+- .--.+++ ||.=... -.. .+.++.+. .+--..+|+||..+-... .+. -|.-..-+|
T Consensus 159 ~~v~--~~~g~~~-D~~h~~~~~~~~-~~~~~~l~---~~~i~~vH~~D~~~~~~~-------~~~--~~~~~~~~G--- 219 (272)
T 2q02_A 159 REAG--SPFKVLL-DTFHHHLYEEAE-KEFASRID---ISAIGLVHLSGVEDTRPT-------EAL--ADEQRIMLS--- 219 (272)
T ss_dssp HHHT--CCCEEEE-EHHHHHHCTTHH-HHHHHHCC---GGGEEEEEECBCCCCSCG-------GGC--CGGGCBCCC---
T ss_pred HHhC--cCeEEEE-EchHhhccCCCc-hhhhhhCC---HhHEEEEEeCCCcCCCCc-------hhc--cccccccCC---
Confidence 6653 2224444 7642222 011 13444332 233468899987532100 000 011111122
Q ss_pred CCCCCCC-cccHHHHHHHHHcCCCC
Q 012949 388 YAKGASG-NVATEDVVYMLSGLGVE 411 (452)
Q Consensus 388 ~a~graG-NaalE~vv~~L~~~Gi~ 411 (452)
.| +.+...++..|+..|++
T Consensus 220 -----~G~~id~~~~~~~L~~~gy~ 239 (272)
T 2q02_A 220 -----EKDVMQNYQQVQRLENMGYR 239 (272)
T ss_dssp -----TTCSSCHHHHHHHHHHTTCC
T ss_pred -----CCCcccHHHHHHHHHhcCCC
Confidence 34 79999999999987765
No 52
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=96.62 E-value=0.083 Score=51.26 Aligned_cols=210 Identities=13% Similarity=0.128 Sum_probs=128.2
Q ss_pred EEeCCccccCCCCCCCCCHHHHHHHHHHHHHC--CCCEEEEecCCCCCcccccCCHHHHHHHHHh-cc-CCceeEEe--c
Q 012949 129 IVEVGPRDGLQNEKNTVPTGVKVELIRRLVSS--GLPVVEATSFVSPKWVPQLADARDVMEAVRD-LE-GARLPVLT--P 202 (452)
Q Consensus 129 I~D~TLRDG~Q~~~~~~~~~~k~~i~~~L~~~--Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~-~~-~~~l~~l~--~ 202 (452)
.+|-|+= +...+.++..++++...+. |+..+.+ +|.|+| ...+.++. -. .+++...+ |
T Consensus 15 ~IDhTlL------~p~~t~~~i~~lc~eA~~~~~~~~aVcV----~p~~v~------~a~~~L~~~g~~~v~v~tVigFP 78 (260)
T 1p1x_A 15 LMDLTTL------NDDDTDEKVIALCHQAKTPVGNTAAICI----YPRFIP------IARKTLKEQGTPEIRIATVTNFP 78 (260)
T ss_dssp TEEEECC------CTTCCHHHHHHHHHHTEETTEECSEEEC----CGGGHH------HHHHHHHHTTCTTSEEEEEESTT
T ss_pred HhchhcC------CCCCCHHHHHHHHHHHHhccCCceEEEE----CHHHHH------HHHHHhhhcCCCCceEEEEeCCC
Confidence 4566552 2245889999999999888 8988876 343443 23344442 12 45655444 2
Q ss_pred chhhhhhhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCC
Q 012949 203 NLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSI 282 (452)
Q Consensus 203 ~~~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~ 282 (452)
.-. .+.+ .....++.|++.|++.|.+.+..... .....++..+.+..+.+.|.+.|.
T Consensus 79 ~G~-----------~~~~-------~Kv~E~~~Av~~GAdEIDmVinig~l-----~~g~~~~v~~ei~~v~~a~~~~g~ 135 (260)
T 1p1x_A 79 HGN-----------DDID-------IALAETRAAIAYGADEVDVVFPYRAL-----MAGNEQVGFDLVKACKEACAAANV 135 (260)
T ss_dssp TCC-----------SCHH-------HHHHHHHHHHHHTCSEEEEECCHHHH-----HTTCCHHHHHHHHHHHHHHHHTTC
T ss_pred CCC-----------CcHH-------HHHHHHHHHHHcCCCEEEEeccHHhh-----hCCCHHHHHHHHHHHHHHhcccCC
Confidence 111 1110 12347889999999999999876543 123456788888888888887776
Q ss_pred cEEEEEEeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcC--CcCCCcHHHHHHHHHHHHHhC-CCccEEEEeCCCcC
Q 012949 283 PVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGD--TIGVGTPGTVVPMLEAVMAVV-PVEKLAVHLHDTYG 359 (452)
Q Consensus 283 ~V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~D--T~G~~~P~~v~~li~~l~~~~-p~~~l~vH~Hnd~G 359 (452)
.+-+-|.. .-..+.+.+.+.++.+.++|||-|--.- +.|.++|+.+.-|.+.+++.. +. ++.+..---.-
T Consensus 136 ~lKvIlEt------~~L~d~e~i~~a~~ia~eaGADfVKTSTGf~~~gAt~e~v~lm~~~I~~~~~g~-~v~VKaaGGIr 208 (260)
T 1p1x_A 136 LLKVIIET------GELKDEALIRKASEISIKAGADFIKTSTGKVAVNATPESARIMMEVIRDMGVEK-TVGFKPAGGVR 208 (260)
T ss_dssp EEEEECCH------HHHCSHHHHHHHHHHHHHTTCSEEECCCSCSSCCCCHHHHHHHHHHHHHHTCTT-TCEEECBSSCC
T ss_pred eEEEEEec------ccCCcHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCHHHHHHHHHHHHHhcCCC-CceEEEeCCCC
Confidence 65432322 1234566688899999999999887642 224559999988877776542 22 35554433222
Q ss_pred cHHHHHHHHHH-----cCCCEEeecccCCCC
Q 012949 360 QSLPNILISLQ-----MGISTVDCSVAGLGG 385 (452)
Q Consensus 360 lA~ANaLaAl~-----aGa~~VD~Sv~GlGe 385 (452)
. ...+++=++ .|.+|++....=+|-
T Consensus 209 t-~~~al~~i~aga~~lG~~w~~~~~~RiGt 238 (260)
T 1p1x_A 209 T-AEDAQKYLAIADELFGADWADARHYRFGA 238 (260)
T ss_dssp S-HHHHHHHHHHHHHHHCTTSCSTTTBCEEE
T ss_pred C-HHHHHHHHHhhhhhccccccccCceEeec
Confidence 1 333333333 466677766665554
No 53
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=96.60 E-value=0.078 Score=50.14 Aligned_cols=190 Identities=17% Similarity=0.103 Sum_probs=118.1
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEecchhhhhhhhhhhhhccchhhh
Q 012949 144 TVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVIS 223 (452)
Q Consensus 144 ~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~ 223 (452)
..+.++..++++...+.|+..+-+- |.|++ ...+.++. .++++...+ +.. +...+.+
T Consensus 15 ~~t~~~i~~l~~~a~~~~~~aVcv~----p~~v~------~~~~~l~~-~~v~v~~vi-gFP--------~G~~~~~--- 71 (220)
T 1ub3_A 15 TATLEEVAKAAEEALEYGFYGLCIP----PSYVA------WVRARYPH-APFRLVTVV-GFP--------LGYQEKE--- 71 (220)
T ss_dssp TCCHHHHHHHHHHHHHHTCSEEECC----GGGHH------HHHHHCTT-CSSEEEEEE-STT--------TCCSCHH---
T ss_pred CCCHHHHHHHHHHHHHhCCCEEEEC----HHHHH------HHHHHhCC-CCceEEEEe-cCC--------CCCCchH---
Confidence 4589999999999999999999873 33332 12223322 234444333 111 0111111
Q ss_pred hhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHH
Q 012949 224 SNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPS 303 (452)
Q Consensus 224 ~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e 303 (452)
.....++.|++.|++.|.+.+..... .....++.++.+..+++.+.+.+++|. +. ....+++
T Consensus 72 ----~k~~e~~~Ai~~GAdevd~vinig~~-----~~g~~~~v~~ei~~v~~a~~~~~lkvI--le-------t~~l~~e 133 (220)
T 1ub3_A 72 ----VKALEAALACARGADEVDMVLHLGRA-----KAGDLDYLEAEVRAVREAVPQAVLKVI--LE-------TGYFSPE 133 (220)
T ss_dssp ----HHHHHHHHHHHTTCSEEEEECCHHHH-----HTTCHHHHHHHHHHHHHHSTTSEEEEE--CC-------GGGSCHH
T ss_pred ----HHHHHHHHHHHcCCCEEEecccchhh-----hCCCHHHHHHHHHHHHHHHcCCCceEE--Ee-------cCCCCHH
Confidence 12247889999999999998865432 123467788888888888766555543 11 1235688
Q ss_pred HHHHHHHHHHHCCcCEEEEcC--CcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEeecc
Q 012949 304 KVAYVAKELHDMGCFEISLGD--TIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCSV 380 (452)
Q Consensus 304 ~l~~~a~~l~~~Gad~I~L~D--T~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~Sv 380 (452)
.+...++.+.++|||.|--.= +.|.++|+++..+.+.+...+ .+-.---.- -...+++=+++|+++|=+|.
T Consensus 134 ~i~~a~~ia~eaGADfVKTsTGf~~~gat~~dv~~m~~~vg~~v-----~VkaaGGir-t~~~al~~i~aGa~RiG~S~ 206 (220)
T 1ub3_A 134 EIARLAEAAIRGGADFLKTSTGFGPRGASLEDVALLVRVAQGRA-----QVKAAGGIR-DRETALRMLKAGASRLGTSS 206 (220)
T ss_dssp HHHHHHHHHHHHTCSEEECCCSSSSCCCCHHHHHHHHHHHTTSS-----EEEEESSCC-SHHHHHHHHHTTCSEEEETT
T ss_pred HHHHHHHHHHHhCCCEEEeCCCCCCCCCCHHHHHHHHHhhCCCC-----eEEEECCCC-CHHHHHHHHHCCCcccchhH
Confidence 999999999999999887642 236668988888766542222 222211111 22566777789999886663
No 54
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=96.58 E-value=0.039 Score=55.12 Aligned_cols=165 Identities=20% Similarity=0.195 Sum_probs=83.3
Q ss_pred CccEEEeCCc---cccCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecCCC-CCcccccCCHHHHHHHH----Hhcc---
Q 012949 125 RFVKIVEVGP---RDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVS-PKWVPQLADARDVMEAV----RDLE--- 193 (452)
Q Consensus 125 ~~V~I~D~TL---RDG~Q~~~~~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s-~~~~p~~~D~e~v~~~i----~~~~--- 193 (452)
.-.-|+.+|+ =||.+ .++.+..++.++.+.+.|.+.|++|.-+. |. +.+ +.++.++++ +.+.
T Consensus 43 ~vMGIlNvTPDSFsdgg~----~~~~~~a~~~A~~~v~~GAdIIDIGgeSTrPG--~~v-~~~eEl~Rv~pvI~~l~~~~ 115 (318)
T 2vp8_A 43 LIMAIVNRTPDSFYDKGA----TFSDAAARDAVHRAVADGADVIDVGGVKAGPG--ERV-DVDTEITRLVPFIEWLRGAY 115 (318)
T ss_dssp EEEEEEC------------------CHHHHHHHHHHHHTTCSEEEEC-------------CHHHHHHHHHHHHHHHHHHS
T ss_pred EEEEEEeCCCCcccCCCc----cCCHHHHHHHHHHHHHCCCCEEEECCCcCCCC--CCC-CHHHHHHHHHHHHHHHHhhC
Confidence 3345666766 56655 46778899999999999999999996432 32 222 333434333 3321
Q ss_pred -CCceeEEecchhhhhhhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHH
Q 012949 194 -GARLPVLTPNLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRA 272 (452)
Q Consensus 194 -~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~ 272 (452)
++.+++=+.. .+-+++|+++|++.|.=.....+ .+
T Consensus 116 ~~vpISIDT~~--------------------------~~VaeaAl~aGa~iINDVsg~~d------------------~~ 151 (318)
T 2vp8_A 116 PDQLISVDTWR--------------------------AQVAKAACAAGADLINDTWGGVD------------------PA 151 (318)
T ss_dssp TTCEEEEECSC--------------------------HHHHHHHHHHTCCEEEETTSSSS------------------TT
T ss_pred CCCeEEEeCCC--------------------------HHHHHHHHHhCCCEEEECCCCCc------------------hH
Confidence 4434332211 23678899999996653322111 24
Q ss_pred HHHHHHhCCCcEEEEEEeeecC-CCCC--CCC------------HHHHHHHHHHHHHCCcC--EEEEcCC-cCCC-cHHH
Q 012949 273 VAHAAKVLSIPVRGYVSCVVGC-PVEG--AIP------------PSKVAYVAKELHDMGCF--EISLGDT-IGVG-TPGT 333 (452)
Q Consensus 273 ~v~~Ak~~G~~V~~~l~~~~g~-p~~~--r~d------------~e~l~~~a~~l~~~Gad--~I~L~DT-~G~~-~P~~ 333 (452)
+++.+++.|..+. ++..-|. |..- +.+ .+++.+.++.+.++|++ .|.| |. +|.. +.++
T Consensus 152 m~~vaa~~g~~vV--lmh~~G~~p~tmq~~~~y~~~~~dv~~ev~~~l~~~i~~a~~aGI~~~~Iil-DPG~GF~Kt~~~ 228 (318)
T 2vp8_A 152 MPEVAAEFGAGLV--CAHTGGALPRTRPFRVSYGTTTRGVVDAVISQVTAAAERAVAAGVAREKVLI-DPAHDFGKNTFH 228 (318)
T ss_dssp HHHHHHHHTCEEE--EECC-------------CCSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEE-ETTTTCCTTSHH
T ss_pred HHHHHHHhCCCEE--EECCCCCCccccccccccccccccHHHHHHHHHHHHHHHHHHcCCChhhEEE-cCCCCcccCHHH
Confidence 4566777887765 5554333 3211 110 15666678888899986 6666 54 2322 3455
Q ss_pred HHHHHHHHHH
Q 012949 334 VVPMLEAVMA 343 (452)
Q Consensus 334 v~~li~~l~~ 343 (452)
-.++++.+..
T Consensus 229 nl~ll~~l~~ 238 (318)
T 2vp8_A 229 GLLLLRHVAD 238 (318)
T ss_dssp HHHHHHTHHH
T ss_pred HHHHHHHHHH
Confidence 6666666653
No 55
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=96.58 E-value=0.34 Score=45.93 Aligned_cols=245 Identities=9% Similarity=-0.005 Sum_probs=124.6
Q ss_pred CCCccEEEeCCccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEec
Q 012949 123 IPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTP 202 (452)
Q Consensus 123 ~p~~V~I~D~TLRDG~Q~~~~~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~ 202 (452)
|+-++-+...++++ .+ -.+.++.+.++|++.||+..... + .+.+++.+.++. .++++.++.+
T Consensus 24 m~mklg~~~~~~~~--------~~---~~~~l~~~~~~G~~~vEl~~~~~----~--~~~~~~~~~l~~-~gl~v~~~~~ 85 (287)
T 3kws_A 24 LELKLSFQEGIAPG--------ES---LNEKLDFMEKLGVVGFEPGGGGL----A--GRVNEIKQALNG-RNIKVSAICA 85 (287)
T ss_dssp CCCEEEEETTSSCC--------SS---HHHHHHHHHHTTCCEEECBSTTC----G--GGHHHHHHHHTT-SSCEECEEEC
T ss_pred ceeeEEEEecccCC--------CC---HHHHHHHHHHcCCCEEEecCCch----H--HHHHHHHHHHHH-cCCeEEEEec
Confidence 34456666666654 13 35677778899999999976421 1 234455555543 3566655443
Q ss_pred chhhhhhhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhh-hcCCCHHHHHHHHHHHHHHHHhCC
Q 012949 203 NLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKS-NINCSIEDSLVRYRAVAHAAKVLS 281 (452)
Q Consensus 203 ~~~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~-~~~~s~e~~l~~~~~~v~~Ak~~G 281 (452)
..... +.......-+.......+.++.|.+.|++.|.+........... ......+...+.+.++.++|++.|
T Consensus 86 ~~~~~------l~~~d~~~r~~~~~~~~~~i~~a~~lGa~~v~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~G 159 (287)
T 3kws_A 86 GFKGF------ILSTDPAIRKECMDTMKEIIAAAGELGSTGVIIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHG 159 (287)
T ss_dssp CCCSC------TTBSSHHHHHHHHHHHHHHHHHHHHTTCSEEEECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCc------CCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 21100 00000000000000123477888899999998754311100000 000123456677778889999999
Q ss_pred CcEEEEEEeeecCCCCC--CCCHHHHHHHHHHHHHCCcCEEE-EcCCcCCCc-HHHHHHHHHHHHHhCCCccEEEEeCCC
Q 012949 282 IPVRGYVSCVVGCPVEG--AIPPSKVAYVAKELHDMGCFEIS-LGDTIGVGT-PGTVVPMLEAVMAVVPVEKLAVHLHDT 357 (452)
Q Consensus 282 ~~V~~~l~~~~g~p~~~--r~d~e~l~~~a~~l~~~Gad~I~-L~DT~G~~~-P~~v~~li~~l~~~~p~~~l~vH~Hnd 357 (452)
+.+. +... .+..+ -.+++.+.++++.+ +.+.+. .-|+.=... -....+.++.+. + --..+|++|.
T Consensus 160 v~l~--lE~~--~~~~~~~~~~~~~~~~ll~~v---~~~~vg~~~D~~h~~~~g~d~~~~l~~~~---~-~i~~vHlkD~ 228 (287)
T 3kws_A 160 TSVI--FEPL--NRKECFYLRQVADAASLCRDI---NNPGVRCMGDFWHMTWEETSDMGAFISGG---E-YLQHVHVASR 228 (287)
T ss_dssp CCEE--ECCC--CTTTCSSCCCHHHHHHHHHHH---CCTTEEEEEEHHHHHHHCSCHHHHHHHHG---G-GEEEEEECCT
T ss_pred CEEE--EEec--CcccCcccCCHHHHHHHHHHc---CCCCeeEEeehHHHHhcCCCHHHHHHHhh---h-hEEEEEeCCC
Confidence 8764 3311 11111 23567777776655 333222 236532211 011223333332 2 2367999997
Q ss_pred cCcHHHHHHHHHHcCCCEEeecccCCCCCCCCCCCCCc--ccHHHHHHHHHcCCCCCC----C----C-hhhHHHHHHHH
Q 012949 358 YGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGN--VATEDVVYMLSGLGVETN----V----D-LRKLMLAGDFI 426 (452)
Q Consensus 358 ~GlA~ANaLaAl~aGa~~VD~Sv~GlGecP~a~graGN--aalE~vv~~L~~~Gi~t~----i----D-l~~L~~la~~v 426 (452)
.+ .+ .+ +.|. .+...++..|+..|++-. + | .+.+....+++
T Consensus 229 ~~-------------------------r~--~p-G~G~d~id~~~i~~~L~~~gy~g~i~lE~~~~~~~~~~~~~s~~~l 280 (287)
T 3kws_A 229 KR-------------------------RS--MP-GEDGDADNYINGFKGLKMIGYNNYVSFECGCQGDRNVVVPAAVKLL 280 (287)
T ss_dssp TT-------------------------SC--ST-TTTGGGCCCHHHHHHHHHTTCCSEEEECCCCSSCHHHHHHHHHHHH
T ss_pred CC-------------------------CC--CC-CCCCCCcCHHHHHHHHHHcCCCccEEEEecCCCCHHHHHHHHHHHH
Confidence 51 10 12 2689 999999999998765421 1 2 24555555666
Q ss_pred HHHh
Q 012949 427 NKHL 430 (452)
Q Consensus 427 ~~~~ 430 (452)
.+.+
T Consensus 281 ~~~~ 284 (287)
T 3kws_A 281 REQW 284 (287)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 56
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=96.51 E-value=0.19 Score=47.45 Aligned_cols=209 Identities=11% Similarity=-0.007 Sum_probs=109.6
Q ss_pred HHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEe-cchhhhhhhhhhhhhccchhhhhhhhc
Q 012949 150 KVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLT-PNLKVILQRSILFQQCHASVISSNLWV 228 (452)
Q Consensus 150 k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~-~~~~~~i~r~~~~~~~~~~~i~~~~~~ 228 (452)
-.+.++.+.++|++.||+..+. -.+.+++.+.+++ .++++.++. |... ......++.. .....+.....
T Consensus 25 ~~~~l~~~~~~G~~~vEl~~~~-------~~~~~~~~~~l~~-~gl~~~~~~~~~~~-~~~~~~~~~~-~~~~r~~~~~~ 94 (269)
T 3ngf_A 25 FLERFRLAAEAGFGGVEFLFPY-------DFDADVIARELKQ-HNLTQVLFNMPPGD-WAAGERGMAA-ISGREQEFRDN 94 (269)
T ss_dssp HHHHHHHHHHTTCSEEECSCCT-------TSCHHHHHHHHHH-TTCEEEEEECCCSC-TTTTCCBCTT-CTTCHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEecCCc-------cCCHHHHHHHHHH-cCCcEEEEecCCCc-cccCCCCcCC-CccHHHHHHHH
Confidence 3456777888999999997532 1355666666654 366665543 2111 0000000000 00000000011
Q ss_pred cHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCH----HHHHHHHHHHHHHHHhCCCcEEEEEEeeecC--CCCCCCCH
Q 012949 229 YLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSI----EDSLVRYRAVAHAAKVLSIPVRGYVSCVVGC--PVEGAIPP 302 (452)
Q Consensus 229 ~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~----e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~--p~~~r~d~ 302 (452)
..+.++.|.+.|++.|.+... .+ .+.+. +...+.+.++.++|++.|+.+. +...-.. |...-.++
T Consensus 95 ~~~~i~~A~~lGa~~v~~~~g-~~------~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~--lE~~n~~~~~~~~~~~~ 165 (269)
T 3ngf_A 95 VDIALHYALALDCRTLHAMSG-IT------EGLDRKACEETFIENFRYAADKLAPHGITVL--VEPLNTRNMPGYFIVHQ 165 (269)
T ss_dssp HHHHHHHHHHTTCCEEECCBC-BC------TTSCHHHHHHHHHHHHHHHHHHHGGGTCEEE--ECCCCTTTSTTBSCCCH
T ss_pred HHHHHHHHHHcCCCEEEEccC-CC------CCCCHHHHHHHHHHHHHHHHHHHHHcCCEEE--EeeCCcccCccchhcCH
Confidence 234778888999999987654 21 12233 3455556677888999998754 3321000 01112366
Q ss_pred HHHHHHHHHHHHCCcCEEE-EcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEeeccc
Q 012949 303 SKVAYVAKELHDMGCFEIS-LGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCSVA 381 (452)
Q Consensus 303 e~l~~~a~~l~~~Gad~I~-L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~Sv~ 381 (452)
+.+.++++.+ +.+.+. .-|+.=...-. .+....+++ +.+-...+|++|..|-
T Consensus 166 ~~~~~l~~~v---~~~~vg~~~D~~h~~~~g--~d~~~~l~~-~~~~i~~vHl~D~~~r--------------------- 218 (269)
T 3ngf_A 166 LEAVGLVKRV---NRPNVAVQLDLYHAQIMD--GDLTRLIEK-MNGAFSHVQIASVPDR--------------------- 218 (269)
T ss_dssp HHHHHHHHHH---CCTTEEEEEEHHHHHHHT--CCHHHHHHH-TTTSEEEEEECCTTTC---------------------
T ss_pred HHHHHHHHHh---CCCCCCeEEEhhhHHhhC--CCHHHHHHH-hhhhEEEEEEecCCCC---------------------
Confidence 7777776655 333222 23653211100 122333333 3333468999997531
Q ss_pred CCCCCCCCCCCCCcccHHHHHHHHHcCCCC
Q 012949 382 GLGGCPYAKGASGNVATEDVVYMLSGLGVE 411 (452)
Q Consensus 382 GlGecP~a~graGNaalE~vv~~L~~~Gi~ 411 (452)
+ .+| .|..+...++..|+..|++
T Consensus 219 ----~--~~G-~G~id~~~~~~~L~~~gy~ 241 (269)
T 3ngf_A 219 ----H--EPD-EGELNYPYLFSVLESVGYR 241 (269)
T ss_dssp ----C--CTT-SSSBCHHHHHHHHHHTTCC
T ss_pred ----C--CCC-CCccCHHHHHHHHHHcCCC
Confidence 1 122 6889999999999987775
No 57
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=96.51 E-value=0.02 Score=53.46 Aligned_cols=153 Identities=22% Similarity=0.177 Sum_probs=94.6
Q ss_pred HHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEecchhhhhhhhhhhhhccchhhhhhh
Q 012949 147 TGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNL 226 (452)
Q Consensus 147 ~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~ 226 (452)
.++-+++++.|.+.|++.||++.-. .+..+.++.+++ ++....+-+ .
T Consensus 24 ~~~~~~~~~~l~~gGv~~iel~~k~--------~~~~~~i~~~~~-~~~~~gag~--v---------------------- 70 (207)
T 2yw3_A 24 GEDLLGLARVLEEEGVGALEITLRT--------EKGLEALKALRK-SGLLLGAGT--V---------------------- 70 (207)
T ss_dssp CCCHHHHHHHHHHTTCCEEEEECSS--------THHHHHHHHHTT-SSCEEEEES--C----------------------
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCC--------hHHHHHHHHHhC-CCCEEEeCe--E----------------------
Confidence 3456789999999999999998532 123455555655 443322211 0
Q ss_pred hccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHH
Q 012949 227 WVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVA 306 (452)
Q Consensus 227 ~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~ 306 (452)
...+.++.|+++|++.|+.. -.+ .++++.+++.|..+.. | -.+++.+
T Consensus 71 -l~~d~~~~A~~~GAd~v~~~--~~d------------------~~v~~~~~~~g~~~i~------G-----~~t~~e~- 117 (207)
T 2yw3_A 71 -RSPKEAEAALEAGAAFLVSP--GLL------------------EEVAALAQARGVPYLP------G-----VLTPTEV- 117 (207)
T ss_dssp -CSHHHHHHHHHHTCSEEEES--SCC------------------HHHHHHHHHHTCCEEE------E-----ECSHHHH-
T ss_pred -eeHHHHHHHHHcCCCEEEcC--CCC------------------HHHHHHHHHhCCCEEe------c-----CCCHHHH-
Confidence 01248999999999998743 222 2566778888887542 1 1234443
Q ss_pred HHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEE
Q 012949 307 YVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTV 376 (452)
Q Consensus 307 ~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~V 376 (452)
..+.++|+|.|.+- . ..+..=.+.++.+++.+|.+++-. .=|....|.-.-+.+|++.|
T Consensus 118 ---~~A~~~Gad~v~~f---p-a~~~gG~~~lk~l~~~~~~ipvva----iGGI~~~n~~~~l~aGa~~v 176 (207)
T 2yw3_A 118 ---ERALALGLSALKFF---P-AEPFQGVRVLRAYAEVFPEVRFLP----TGGIKEEHLPHYAALPNLLA 176 (207)
T ss_dssp ---HHHHHTTCCEEEET---T-TTTTTHHHHHHHHHHHCTTCEEEE----BSSCCGGGHHHHHTCSSBSC
T ss_pred ---HHHHHCCCCEEEEe---c-CccccCHHHHHHHHhhCCCCcEEE----eCCCCHHHHHHHHhCCCcEE
Confidence 33456799998881 1 011101356788888887656543 23455678888999998844
No 58
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=96.50 E-value=0.055 Score=51.09 Aligned_cols=214 Identities=17% Similarity=0.177 Sum_probs=111.1
Q ss_pred HHHHHHHHHHHCCCCEEEEecCCCCC-cccccCCH---HHHHHHHHhccCC-ceeEEecchhhhhhhhhhhhhccchhhh
Q 012949 149 VKVELIRRLVSSGLPVVEATSFVSPK-WVPQLADA---RDVMEAVRDLEGA-RLPVLTPNLKVILQRSILFQQCHASVIS 223 (452)
Q Consensus 149 ~k~~i~~~L~~~Gv~~IEvG~~~s~~-~~p~~~D~---e~v~~~i~~~~~~-~l~~l~~~~~~~i~r~~~~~~~~~~~i~ 223 (452)
.-.+.++.+.++|++.||+ +...|. |.+...+. +++.+.+++ .++ .+++..|-.-+ +.. ..+..+
T Consensus 15 ~~~~~~~~~~~~G~~~vEl-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gl~~~~~h~~~~~~-------l~s-~~~~r~ 84 (270)
T 3aam_A 15 GVAGAVEEATALGLTAFQI-FAKSPRSWRPRALSPAEVEAFRALREA-SGGLPAVIHASYLVN-------LGA-EGELWE 84 (270)
T ss_dssp HHHHHHHHHHHHTCSCEEE-ESSCTTCCSCCCCCHHHHHHHHHHHHH-TTCCCEEEECCTTCC-------TTC-SSTHHH
T ss_pred cHHHHHHHHHHcCCCEEEE-eCCCCCcCcCCCCCHHHHHHHHHHHHH-cCCceEEEecCcccC-------CCC-CHHHHH
Confidence 3456677788899999999 443332 22111122 222222222 344 44544442110 000 011100
Q ss_pred hhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHH-hCCCcEEEEEEeeecCCCCCCCCH
Q 012949 224 SNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAK-VLSIPVRGYVSCVVGCPVEGAIPP 302 (452)
Q Consensus 224 ~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak-~~G~~V~~~l~~~~g~p~~~r~d~ 302 (452)
.......+.++.|.+.|++.|.+..... +.+...+.+.++.++|+ +.|+.+. |....+.+..-..++
T Consensus 85 ~~~~~~~~~i~~a~~lGa~~vv~h~g~~----------~~~~~~~~l~~l~~~a~~~~gv~l~--lEn~~~~~~~~~~~~ 152 (270)
T 3aam_A 85 KSVASLADDLEKAALLGVEYVVVHPGSG----------RPERVKEGALKALRLAGVRSRPVLL--VENTAGGGEKVGARF 152 (270)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEECCCBS----------CHHHHHHHHHHHHHHHTCCSSSEEE--EECCCCCTTBSCCSH
T ss_pred HHHHHHHHHHHHHHHcCCCEEEECCCCC----------CHHHHHHHHHHHHHhhcccCCCEEE--EecCCCCCCccCCCH
Confidence 0011123477888899999987654321 11667788888889998 8887654 443211111111378
Q ss_pred HHHHHHHHHHHHCCcCEEEEcCCc-----CCCcHHHHHHHHHHHHHhCC-CccEEEEeCCCcCcHHHHHHHHHHcCCCEE
Q 012949 303 SKVAYVAKELHDMGCFEISLGDTI-----GVGTPGTVVPMLEAVMAVVP-VEKLAVHLHDTYGQSLPNILISLQMGISTV 376 (452)
Q Consensus 303 e~l~~~a~~l~~~Gad~I~L~DT~-----G~~~P~~v~~li~~l~~~~p-~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~V 376 (452)
+.+.++++.+ . -.+++ ||. |.-......++++.+.+.++ +--..+|.||..+-- |.. .
T Consensus 153 ~~~~~l~~~v-~---vg~~l-D~~H~~~~g~d~~~~~~~~l~~~~~~~g~~~i~~vHl~D~~~~~----------~~~-~ 216 (270)
T 3aam_A 153 EELAWLVADT-P---LQVCL-DTCHAYAAGYDVAEDPLGVLDALDRAVGLERVPVVHLNDSVGGL----------GSR-V 216 (270)
T ss_dssp HHHHHHHTTS-S---CEEEE-EHHHHHHHTCCTTTCHHHHHHHHHHHTCGGGCCEEECCEESSCT----------TCC-C
T ss_pred HHHHHHHHhC-C---EEEEE-ehhhHHhccCCchhhHHHHHHHHHHhcCccceeEEEEecCCCcc----------ccC-c
Confidence 8888888766 2 23444 653 32111124556666655554 334689999976521 111 0
Q ss_pred eecccCCCCCCCCCCCCCcccHHHHHHHHHcCCC
Q 012949 377 DCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGV 410 (452)
Q Consensus 377 D~Sv~GlGecP~a~graGNaalE~vv~~L~~~Gi 410 (452)
|-- ..+| .|..+ +.++..|+..|+
T Consensus 217 d~h-~~~G--------~G~id-~~~~~~L~~~~y 240 (270)
T 3aam_A 217 DHH-AHLL--------QGKIG-EGLKRVFLDPRL 240 (270)
T ss_dssp CCE-ECTT--------SSSST-THHHHHHTCGGG
T ss_pred ccc-cCCC--------CCCcC-HHHHHHHhccCc
Confidence 100 1122 47899 999999987544
No 59
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=96.47 E-value=0.12 Score=51.48 Aligned_cols=204 Identities=11% Similarity=0.116 Sum_probs=114.4
Q ss_pred CCccEEEeCCccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecCC-CCCccc---ccCCHHHHHHH----HHhc---
Q 012949 124 PRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFV-SPKWVP---QLADARDVMEA----VRDL--- 192 (452)
Q Consensus 124 p~~V~I~D~TLRDG~Q~~~~~~~~~~k~~i~~~L~~~Gv~~IEvG~~~-s~~~~p---~~~D~e~v~~~----i~~~--- 192 (452)
|.-+-|+.+|+ |-..- ...+.+..++.++.+.+.|.+.|++|.-+ .|.... .+ +.++.+++ ++.+
T Consensus 28 ~~vMGIlNvTp-DSFsd--~~~~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V-~~~eE~~Rv~pvI~~l~~~ 103 (314)
T 3tr9_A 28 PAVMGIINVSP-NSFYH--PHLDLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSP-STQIELDRLLPVIDAIKKR 103 (314)
T ss_dssp CEEEEEEECST-TCSBC--BCCSHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CH-HHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEEEeCCC-Cchhh--ccCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCC-CHHHHHHHHHHHHHHHHhh
Confidence 44455777777 33332 35688999999999999999999999643 332110 11 12222222 2222
Q ss_pred cCCceeEEecchhhhhhhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHH
Q 012949 193 EGARLPVLTPNLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRA 272 (452)
Q Consensus 193 ~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~ 272 (452)
.++.+++=+.. .+-+++|+++|++.|.=..... ..+
T Consensus 104 ~~vpISIDT~~--------------------------~~Va~aAl~aGa~iINDVsg~~------------------~~~ 139 (314)
T 3tr9_A 104 FPQLISVDTSR--------------------------PRVMREAVNTGADMINDQRALQ------------------LDD 139 (314)
T ss_dssp CCSEEEEECSC--------------------------HHHHHHHHHHTCCEEEETTTTC------------------STT
T ss_pred CCCeEEEeCCC--------------------------HHHHHHHHHcCCCEEEECCCCC------------------chH
Confidence 23333321111 2367889999998765332211 113
Q ss_pred HHHHHHhCCCcEEEEEEeeecCCCCCCCC---------HHHHHHHHHHHHHCCcC--EEEEcCC-cC----CCcHHHHHH
Q 012949 273 VAHAAKVLSIPVRGYVSCVVGCPVEGAIP---------PSKVAYVAKELHDMGCF--EISLGDT-IG----VGTPGTVVP 336 (452)
Q Consensus 273 ~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d---------~e~l~~~a~~l~~~Gad--~I~L~DT-~G----~~~P~~v~~ 336 (452)
+.+.+++.|..+. ++..-|.|..-... .+++.+.++.+.++|++ .|.| |. .| .-++++-.+
T Consensus 140 m~~v~a~~g~~vV--lMh~~G~P~tmq~~~~ydvv~ev~~~l~~~i~~a~~~GI~~~~Iil-DPG~G~~~F~Kt~~~n~~ 216 (314)
T 3tr9_A 140 ALTTVSALKTPVC--LMHFPSETRKPGSTTHFYFLQSVKKELQESIQRCKKAGISEDRIII-DPGFGQGNYGKNVSENFY 216 (314)
T ss_dssp HHHHHHHHTCCEE--EECCCCTTCCTTSSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEE-ECCCCSGGGCCCHHHHHH
T ss_pred HHHHHHHhCCeEE--EECCCCCCcccccccccchHHHHHHHHHHHHHHHHHcCCCHhHEEE-eCCCCchhhcCCHHHHHH
Confidence 4566677787765 56544443221111 34667777888999986 6666 64 34 235666777
Q ss_pred HHHHHHHh-CCCccEEE-E-------------eCCCcCcHHHHHHHHHHcCCCEEee
Q 012949 337 MLEAVMAV-VPVEKLAV-H-------------LHDTYGQSLPNILISLQMGISTVDC 378 (452)
Q Consensus 337 li~~l~~~-~p~~~l~v-H-------------~Hnd~GlA~ANaLaAl~aGa~~VD~ 378 (452)
+++.+..- ..+.|+-+ . ..+-.+-.+|-+..|++.||++|-+
T Consensus 217 lL~~l~~l~~lg~PvL~G~SRKsfig~~~~~~~~~R~~~t~a~~~~a~~~Ga~IvRv 273 (314)
T 3tr9_A 217 LLNKLPEFVAMGLPVLSGWSRKSMIGDVLNQPPENRLFGSIAADVLAVYHGASIIRT 273 (314)
T ss_dssp HHHTTHHHHTTSSCBEECCTTCHHHHHHHTCCGGGCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHhcCCCCEEEEechhhhhhhhcCCChHHhHHHHHHHHHHHHHcCCcEEEe
Confidence 77776442 11223222 1 1223333455567788899997744
No 60
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=96.46 E-value=0.079 Score=50.55 Aligned_cols=198 Identities=18% Similarity=0.180 Sum_probs=123.3
Q ss_pred EEeCCccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEecchhhhh
Q 012949 129 IVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVIL 208 (452)
Q Consensus 129 I~D~TLRDG~Q~~~~~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~~~~~~i 208 (452)
.+|-|+ .+...+.++..++++...+.|+..+.+ +|.|+|. .. .++. .++++...+ +..
T Consensus 16 ~IDhTl------L~p~~t~~~i~~lc~eA~~~~~~aVcV----~p~~v~~------a~-~l~~-~~v~v~tVi-gFP--- 73 (231)
T 3ndo_A 16 LVDHTL------LKPEATPSDVTALVDEAADLGVFAVCV----SPPLVSV------AA-GVAP-SGLAIAAVA-GFP--- 73 (231)
T ss_dssp TEEEEC------CCTTCCHHHHHHHHHHHHHHTCSEEEE----CGGGHHH------HH-HHCC-TTCEEEEEE-STT---
T ss_pred hcCccc------CCCCCCHHHHHHHHHHHHHhCCcEEEE----CHHHHHH------HH-HhcC-CCCeEEEEe-cCC---
Confidence 466666 123468899999999999999999988 3334431 12 2321 344544433 111
Q ss_pred hhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEE
Q 012949 209 QRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYV 288 (452)
Q Consensus 209 ~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l 288 (452)
++..+.+ .....++.|++.|+++|.+.+..... .....++..+.+..+.+.+. |..+- +
T Consensus 74 -----~G~~~~~-------~K~~E~~~Ai~~GAdEIDmVinig~l-----k~g~~~~v~~ei~~v~~a~~--~~~lK--v 132 (231)
T 3ndo_A 74 -----SGKHVPG-------IKATEAELAVAAGATEIDMVIDVGAA-----LAGDLDAVSADITAVRKAVR--AATLK--V 132 (231)
T ss_dssp -----TCCSCHH-------HHHHHHHHHHHTTCSEEEEECCHHHH-----HTTCHHHHHHHHHHHHHHTT--TSEEE--E
T ss_pred -----CCCCcHH-------HHHHHHHHHHHcCCCEEEEEeehHhh-----hcccHHHHHHHHHHHHHHcc--CCceE--E
Confidence 1111111 12347888999999999999875543 12356777888877777775 44332 2
Q ss_pred EeeecCCCCCCC----CHHHHHHHHHHHHHCCcCEEEEcC--C-cCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcH
Q 012949 289 SCVVGCPVEGAI----PPSKVAYVAKELHDMGCFEISLGD--T-IGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQS 361 (452)
Q Consensus 289 ~~~~g~p~~~r~----d~e~l~~~a~~l~~~Gad~I~L~D--T-~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA 361 (452)
... .+.. +++.+.+.++.+.++|+|-|--.- + .|..++++++-+-+.+.. ++.+..----..
T Consensus 133 IiE-----t~~L~~~~t~eei~~a~~ia~~aGADfVKTSTGf~~~~gAt~edv~lm~~~v~~-----~v~VKaaGGIrt- 201 (231)
T 3ndo_A 133 IVE-----SAALLEFSGEPLLADVCRVARDAGADFVKTSTGFHPSGGASVQAVEIMARTVGE-----RLGVKASGGIRT- 201 (231)
T ss_dssp ECC-----HHHHHHHTCHHHHHHHHHHHHHTTCSEEECCCSCCTTCSCCHHHHHHHHHHHTT-----TSEEEEESSCCS-
T ss_pred EEE-----CcccCCCCCHHHHHHHHHHHHHHCcCEEEcCCCCCCCCCCCHHHHHHHHHHhCC-----CceEEEeCCCCC-
Confidence 221 1234 788999999999999999887653 2 466788888776555432 344433221111
Q ss_pred HHHHHHHHHcCCCEEeecc
Q 012949 362 LPNILISLQMGISTVDCSV 380 (452)
Q Consensus 362 ~ANaLaAl~aGa~~VD~Sv 380 (452)
...+++=+++||+++-+|.
T Consensus 202 ~~~a~~~i~aGa~RiGtS~ 220 (231)
T 3ndo_A 202 AEQAAAMLDAGATRLGLSG 220 (231)
T ss_dssp HHHHHHHHHTTCSEEEESS
T ss_pred HHHHHHHHHhcchhcccch
Confidence 2677888899999987764
No 61
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=96.45 E-value=0.075 Score=52.27 Aligned_cols=193 Identities=13% Similarity=0.139 Sum_probs=124.8
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhc-cCCceeEEecchhhhhhhhhhhhhccchhh
Q 012949 144 TVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDL-EGARLPVLTPNLKVILQRSILFQQCHASVI 222 (452)
Q Consensus 144 ~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~-~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i 222 (452)
..+.+....+++...+.+-+.|--.++..-++. ..+.+...++.. ....+++.+.. . .+
T Consensus 25 v~n~e~~~avl~AAe~~~sPvIlq~s~~~~~y~----g~~~~~~~v~~~a~~~~VPValHl-D----------Hg----- 84 (286)
T 1gvf_A 25 IHNAETIQAILEVCSEMRSPVILAGTPGTFKHI----ALEEIYALCSAYSTTYNMPLALHL-D----------HH----- 84 (286)
T ss_dssp CCSHHHHHHHHHHHHHHTCCCEEEECTTHHHHS----CHHHHHHHHHHHHHHTTSCBEEEE-E----------EE-----
T ss_pred eCCHHHHHHHHHHHHHhCCCEEEECChhHHhhc----CHHHHHHHHHHHHHhCCCcEEEEc-C----------CC-----
Confidence 478899999999999999997766554322222 223333333321 12233332210 0 01
Q ss_pred hhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCC-----
Q 012949 223 SSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVE----- 297 (452)
Q Consensus 223 ~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~----- 297 (452)
...+.+..|+++|..-|.+=.|. .+.||.++.-++++++|+..|+.|.+.|-..-|.++.
T Consensus 85 -----~~~e~i~~ai~~GFtSVMiDgS~----------lp~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgg~ed~~~~~~ 149 (286)
T 1gvf_A 85 -----ESLDDIRRKVHAGVRSAMIDGSH----------FPFAENVKLVKSVVDFCHSQDCSVEAELGRLGGVEDDMSVDA 149 (286)
T ss_dssp -----CCHHHHHHHHHTTCCEEEECCTT----------SCHHHHHHHHHHHHHHHHHTTCEEEEEESCCC----------
T ss_pred -----CCHHHHHHHHHcCCCeEEECCCC----------CCHHHHHHHHHHHHHHHHHcCCEEEEEEeeccCcccCccccc
Confidence 02358889999999988764442 2468999999999999999999999888875443432
Q ss_pred ---CCCCHHHHHHHHHHHHHCCcCEEEEc--CCcCC--CcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHH
Q 012949 298 ---GAIPPSKVAYVAKELHDMGCFEISLG--DTIGV--GTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQ 370 (452)
Q Consensus 298 ---~r~d~e~l~~~a~~l~~~Gad~I~L~--DT~G~--~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~ 370 (452)
-.++|+...+++++ .|+|.+.++ -.=|. ..|.-=.++++.+++.++ +||.+|+ --|..-.....|+.
T Consensus 150 ~~~~~T~Peea~~Fv~~---TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~~~-vpLVlHG--gSG~~~e~i~~ai~ 223 (286)
T 1gvf_A 150 ESAFLTDPQEAKRFVEL---TGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREVVD-VPLVLHG--ASDVPDEFVRRTIE 223 (286)
T ss_dssp -CCSSCCHHHHHHHHHH---HCCSEEEECSSCCSSCCSSCCCCCHHHHHHHHHHCC-SCEEECC--CTTCCHHHHHHHHH
T ss_pred ccccCCCHHHHHHHHHH---HCCCEEEeecCccccCcCCCCccCHHHHHHHHHhcC-CCEEEEC--CCCCCHHHHHHHHH
Confidence 23789988888865 489965553 22221 123333567788888876 4788776 45788889999999
Q ss_pred cCCCEEe
Q 012949 371 MGISTVD 377 (452)
Q Consensus 371 aGa~~VD 377 (452)
.|+.-|+
T Consensus 224 ~Gv~KiN 230 (286)
T 1gvf_A 224 LGVTKVN 230 (286)
T ss_dssp TTEEEEE
T ss_pred CCCeEEE
Confidence 9987554
No 62
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=96.38 E-value=0.33 Score=47.96 Aligned_cols=235 Identities=14% Similarity=0.136 Sum_probs=125.2
Q ss_pred EEeCC----ccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHH-HHHhc------cCCce
Q 012949 129 IVEVG----PRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVME-AVRDL------EGARL 197 (452)
Q Consensus 129 I~D~T----LRDG~Q~~~~~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~-~i~~~------~~~~l 197 (452)
.+.+| ++||.+. .+.+..++.++.+.+.|-+.|++|....+ -+.++.++ .++.+ .++.+
T Consensus 18 riNvTg~~sf~~~~~~----~~~~~a~~~A~~~v~~GAdiIDIg~g~~~------v~~~eem~rvv~~i~~~~~~~~vpi 87 (300)
T 3k13_A 18 RCNVAGSRKFLRLVNE----KKYDEALSIARQQVEDGALVIDVNMDDGL------LDARTEMTTFLNLIMSEPEIARVPV 87 (300)
T ss_dssp EEETTTCHHHHHHHHT----TCHHHHHHHHHHHHHTTCSEEEEECCCTT------SCHHHHHHHHHHHHHTCHHHHTSCE
T ss_pred eccCCCCHHHHHHHhc----CCHHHHHHHHHHHHHCCCCEEEECCCCCC------CCHHHHHHHHHHHHHHhhhcCCCeE
Confidence 34677 6777774 57899999999999999999999974322 23333333 33322 22333
Q ss_pred eEEecchhhhhhhhhhhhhccchhhhhhhhccHHhHHHHHH--cCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHH
Q 012949 198 PVLTPNLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIA--AGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAH 275 (452)
Q Consensus 198 ~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~--~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~ 275 (452)
+ +...+ .+-+++|++ .|.+.|.=. +..+ .+ +++.++++
T Consensus 88 s--IDT~~------------------------~~V~eaaL~~~~Ga~iINdI-s~~~----------~d---~~~~~~~~ 127 (300)
T 3k13_A 88 M--IDSSK------------------------WEVIEAGLKCLQGKSIVNSI-SLKE----------GE---EVFLEHAR 127 (300)
T ss_dssp E--EECSC------------------------HHHHHHHHHHCSSCCEEEEE-CSTT----------CH---HHHHHHHH
T ss_pred E--EeCCC------------------------HHHHHHHHHhcCCCCEEEeC-Cccc----------CC---hhHHHHHH
Confidence 2 22111 236788888 688766432 2211 01 23346667
Q ss_pred HHHhCCCcEEEEEEee--ecCCCCCCCCHH----HHHHHHHHH-HHCCc--CEEEEcCC----cCCCcHH------HHHH
Q 012949 276 AAKVLSIPVRGYVSCV--VGCPVEGAIPPS----KVAYVAKEL-HDMGC--FEISLGDT----IGVGTPG------TVVP 336 (452)
Q Consensus 276 ~Ak~~G~~V~~~l~~~--~g~p~~~r~d~e----~l~~~a~~l-~~~Ga--d~I~L~DT----~G~~~P~------~v~~ 336 (452)
.+++.|..|. +++. -|.| .+.+ ...++.+.+ .++|+ +.|.| |. +|....+ ++-+
T Consensus 128 l~a~~ga~vV--~mh~d~~G~p----~t~~~~~~i~~r~~~~~~~~~Gi~~~~Iil-DPgig~~gk~~~~~~~~~~~~l~ 200 (300)
T 3k13_A 128 IIKQYGAATV--VMAFDEKGQA----DTAARKIEVCERAYRLLVDKVGFNPHDIIF-DPNVLAVATGIEEHNNYAVDFIE 200 (300)
T ss_dssp HHHHHTCEEE--EESEETTEEC----CSHHHHHHHHHHHHHHHHHHTCCCGGGEEE-ECCCCCCSSSCGGGTTHHHHHHH
T ss_pred HHHHhCCeEE--EEeeCCCCCC----CCHHHHHHHHHHHHHHHHHHcCCCHHHEEE-eCCCCccCCChHHhhHHHHHHHH
Confidence 7888898765 4432 1222 2233 233444554 78898 45665 42 2332222 3444
Q ss_pred HHHHHHHhCCCccEEEEeCC-CcCcH----------HHHHHHHHHcCCC--EEeecccCCCCCCCCCCCCCcccHHHHHH
Q 012949 337 MLEAVMAVVPVEKLAVHLHD-TYGQS----------LPNILISLQMGIS--TVDCSVAGLGGCPYAKGASGNVATEDVVY 403 (452)
Q Consensus 337 li~~l~~~~p~~~l~vH~Hn-d~GlA----------~ANaLaAl~aGa~--~VD~Sv~GlGecP~a~graGNaalE~vv~ 403 (452)
-++.+++.+|+.++-+=..| .+|+- -+-...|+++|.+ +||.+=..+ -...+-|+.-.
T Consensus 201 ~l~~lk~~lPg~pvl~G~SnkSfglp~~~~~R~~~n~~fl~~ai~~Gld~~Ivn~~~~~~---------~~~i~~~~~~~ 271 (300)
T 3k13_A 201 ATGWIRKNLPGAHVSGGVSNLSFSFRGNNYIREAMHAVFLYHAIQQGMDMGIVNPGTSVL---------YSDIPADTLEK 271 (300)
T ss_dssp HHHHHHHHSTTCEECCBGGGGGGGGTTCHHHHHHHHHHHHHHHHHTTCCEEEECCC-CCC---------GGGSCHHHHHH
T ss_pred HHHHHHHhCCCCCEEEEECcccccCCCCcchhHHHHHHHHHHHHHcCCCEEecCcchhhH---------HhhcCHHHHHH
Confidence 45566667877666554444 25552 1234567899987 555554432 12344443222
Q ss_pred HHHc-CCCCCCCChhhHHHHHHHHHHHh
Q 012949 404 MLSG-LGVETNVDLRKLMLAGDFINKHL 430 (452)
Q Consensus 404 ~L~~-~Gi~t~iDl~~L~~la~~v~~~~ 430 (452)
.... ++... =..+.|.++++.++...
T Consensus 272 ~~~~i~~~~~-~~~~~~~~~~~~~~~~~ 298 (300)
T 3k13_A 272 IEDVVLNRRP-DAAERLIELAEALKETM 298 (300)
T ss_dssp HHHHHTTCST-THHHHHHHHHHHHC---
T ss_pred HHHHHhCCCc-chHHHHHHHHHHHhhcc
Confidence 2222 33321 23678888887776544
No 63
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=96.36 E-value=0.058 Score=52.40 Aligned_cols=227 Identities=15% Similarity=0.045 Sum_probs=111.2
Q ss_pred HHHHHHHHCCCCEEEEecCCCCCcccccC---CHHHHHHHHHhccCCceeEEecchhhhhhhhhhhhhccchhhhhhhhc
Q 012949 152 ELIRRLVSSGLPVVEATSFVSPKWVPQLA---DARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLWV 228 (452)
Q Consensus 152 ~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~---D~e~v~~~i~~~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~~ 228 (452)
.+.+.+.++|++.||+.......+.|.-. +.+++.+.+++ .++++.++....... +...+.....+.-+.....
T Consensus 39 ~~~~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gl~i~~~~~~~~~~--~~~~l~~~d~~~r~~~~~~ 115 (316)
T 3qxb_A 39 LAGLVRDDLGLEYVQYTYDLTDPWWPDIERDRRAIAYAKAFRK-AGLTIESTFGGLASY--TYNHFLAPTLELQSLGYQH 115 (316)
T ss_dssp HHHHHHHTSCCCEEEEETTTSCTTSCHHHHHHHHHHHHHHHHH-TTCEEEEEECCHHHH--TSCBTTCSSHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEeeccccCccccccchhhHHHHHHHHHHH-cCCeEEEeecccccc--ccccCCCCCHHHHHHHHHH
Confidence 45677789999999997642111112100 12233333332 466665543221000 0000111111100000111
Q ss_pred cHHhHHHHHHcCCCEEEEEecC-C-hHHH-hhhcCCCHHHHHHHHHHHHHHHHhCCCc-EEEEEEeeecCCCCCCCCHHH
Q 012949 229 YLQGFEAAIAAGAKEVAIFASA-S-EAFS-KSNINCSIEDSLVRYRAVAHAAKVLSIP-VRGYVSCVVGCPVEGAIPPSK 304 (452)
Q Consensus 229 ~~~~ie~a~~~Gi~~V~i~~s~-S-d~~~-~~~~~~s~e~~l~~~~~~v~~Ak~~G~~-V~~~l~~~~g~p~~~r~d~e~ 304 (452)
..+.++.|.+.|++.|.+.... + ..+. ........+...+.+.++.++|++.|+. +. +...-.. .....+++.
T Consensus 116 ~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~~l~--lE~~~~~-~~~~~t~~~ 192 (316)
T 3qxb_A 116 LKRAIDMTAAMEVPATGMPFGSYSAADALNPARREEIYAIARDMWIELAAYAKRQGLSMLY--VEPVPLA-TEFPSSAAD 192 (316)
T ss_dssp HHHHHHHHHHTTCCEEEECCBBCCHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEE--ECCCSCT-TBSSCSHHH
T ss_pred HHHHHHHHHHcCCCEEEecCCCcCccccCCcccHHHHHHHHHHHHHHHHHHHHhcCCeEEE--EEecCCc-cccCCCHHH
Confidence 2347788889999998764432 1 0000 0000011345667777888999999987 54 3321000 012246788
Q ss_pred HHHHHHHHHHCCcCEEE-EcCCcCCCc------HHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEe
Q 012949 305 VAYVAKELHDMGCFEIS-LGDTIGVGT------PGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVD 377 (452)
Q Consensus 305 l~~~a~~l~~~Gad~I~-L~DT~G~~~------P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD 377 (452)
+.++++.+.+.+.+.+. .-||.=... -....+.++.+..+ -..+|++|..+. .+. +
T Consensus 193 ~~~l~~~v~~~~~~~vg~~lD~~H~~~~~~~~~~~d~~~~l~~~~~~----i~~vHlkD~~~~------------~d~-h 255 (316)
T 3qxb_A 193 AARLMADLDGRTEIPVRLLVDWGHALFEPLFGPEADMDHWMDLCQPW----IAAYHIQQTDGQ------------LDR-H 255 (316)
T ss_dssp HHHHHHHHTTTSSSCEEEEEEHHHHTCHHHHGGGCSHHHHHHHHGGG----EEEEEECBCCSS------------SCC-C
T ss_pred HHHHHHHHhccCCCCEEEEEEccchheecccccccCHHHHHHHHHhh----heEEeeecCCCC------------cCc-c
Confidence 88888877544444332 237632221 01233344444332 357999997652 010 0
Q ss_pred ecccCCCCCCCCCCCCCcccHHHHHHHHHcCCCC
Q 012949 378 CSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVE 411 (452)
Q Consensus 378 ~Sv~GlGecP~a~graGNaalE~vv~~L~~~Gi~ 411 (452)
..+ + +.|..+.+.++..|+..|++
T Consensus 256 ~~~---------~-G~G~id~~~i~~~L~~~gy~ 279 (316)
T 3qxb_A 256 WSF---------T-QPGVVTPQRLQDFWDKYALT 279 (316)
T ss_dssp BCT---------T-SCSSCCHHHHHHHHHHTTCS
T ss_pred CCC---------C-CCceECHHHHHHHHHHcCCC
Confidence 011 1 24789999999999986654
No 64
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=96.35 E-value=0.28 Score=47.23 Aligned_cols=224 Identities=14% Similarity=0.149 Sum_probs=111.8
Q ss_pred HHHHHHHHHHCCCCEEEEecCCCCC-cc-ccc--CCHHHHHHHHHhccCC-ceeEEecchhhhhhhhhhhhhcc-chhhh
Q 012949 150 KVELIRRLVSSGLPVVEATSFVSPK-WV-PQL--ADARDVMEAVRDLEGA-RLPVLTPNLKVILQRSILFQQCH-ASVIS 223 (452)
Q Consensus 150 k~~i~~~L~~~Gv~~IEvG~~~s~~-~~-p~~--~D~e~v~~~i~~~~~~-~l~~l~~~~~~~i~r~~~~~~~~-~~~i~ 223 (452)
-.+.++.+.++|++.||+. ...|. |. +.+ .+.+++.+.+++ .++ .+.+..|-..+ +.... ...-+
T Consensus 20 ~~~~l~~~~~~G~~~vEl~-~~~~~~~~~~~~~~~~~~~~~~~l~~-~gl~~~~~h~~~~~n-------l~s~d~~~~r~ 90 (303)
T 3aal_A 20 LLAASEEAASYGANTFMIY-TGAPQNTKRKSIEELNIEAGRQHMQA-HGIEEIVVHAPYIIN-------IGNTTNLDTFS 90 (303)
T ss_dssp HHHHHHHHHHTTCSEEEEE-SSCTTCCCCCCSGGGCHHHHHHHHHH-TTCCEEEEECCTTCC-------TTCSSCHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEc-CCCCCccCCCCCCHHHHHHHHHHHHH-cCCceEEEecccccc-------CCCCCcHHHHH
Confidence 3566777788999999993 22222 11 111 244555555544 244 34444332100 00000 00000
Q ss_pred hhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHH
Q 012949 224 SNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPS 303 (452)
Q Consensus 224 ~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e 303 (452)
.......+.++.|.+.|++.|.+..... .+.+.++.++++.+.++.+-+....|...|....+.+..-..+++
T Consensus 91 ~~~~~~~~~i~~A~~lGa~~vv~h~g~~-------~~~~~~~~~~~~~~~l~~l~~~a~gv~l~lEn~~~~~~~~~~t~~ 163 (303)
T 3aal_A 91 LGVDFLRAEIERTEAIGAKQLVLHPGAH-------VGAGVEAGLRQIIRGLNEVLTREQNVQIALETMAGKGSECGRTFE 163 (303)
T ss_dssp HHHHHHHHHHHHHHHHTCSEEEECCEEC-------TTSCHHHHHHHHHHHHHHHCCSSCSCEEEEECCCCCTTEECSSHH
T ss_pred HHHHHHHHHHHHHHHcCCCEEEECCCcC-------CCCCHHHHHHHHHHHHHHHHHhCCCCEEEEecCCCCCCccCCCHH
Confidence 0011123477888899999987754321 122567777777776665433222244445532111111113677
Q ss_pred HHHHHHHHHHHCCcCEEEEcCCc-----CCCcHHHHHHHHHHHHHhCC-CccEEEEeCCCcCcHHHHHHHHHHcCCCEEe
Q 012949 304 KVAYVAKELHDMGCFEISLGDTI-----GVGTPGTVVPMLEAVMAVVP-VEKLAVHLHDTYGQSLPNILISLQMGISTVD 377 (452)
Q Consensus 304 ~l~~~a~~l~~~Gad~I~L~DT~-----G~~~P~~v~~li~~l~~~~p-~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD 377 (452)
.+.++++.+....--.+++ ||. |.-....+.++++.+.+.++ +--..+|.||..+-- |.. .|
T Consensus 164 ~~~~li~~v~~~~~vg~~l-D~~H~~~~g~d~~~~~~~~l~~~~~~~g~~~i~~vHl~D~~~~~----------~~~-~d 231 (303)
T 3aal_A 164 ELAYIIDGVAYNDKLSVCF-DTCHTHDAGYDIVNDFDGVLEEFDRIIGLGRLKVLHINDSKNPR----------GSR-KD 231 (303)
T ss_dssp HHHHHHHHCTTGGGEEEEE-EHHHHHHHTCCHHHHHHHHHHHHHHHTCGGGEEEEEECEESSCT----------TCC-CC
T ss_pred HHHHHHHhcCCCCCEEEEE-EccCHhhhCCChhhhHHHHHHHHHHhcCcccEEEEEeeCCCCcC----------CCC-Cc
Confidence 7777776542101113344 763 32111245666666655554 434689999976521 110 01
Q ss_pred ecccCCCCCCCCCCCCCcccHHHHHHHHHcCCC
Q 012949 378 CSVAGLGGCPYAKGASGNVATEDVVYMLSGLGV 410 (452)
Q Consensus 378 ~Sv~GlGecP~a~graGNaalE~vv~~L~~~Gi 410 (452)
- -..+| .|..+.+.++..|+..|+
T Consensus 232 ~-h~~~G--------~G~id~~~~~~~L~~~gy 255 (303)
T 3aal_A 232 R-HENIG--------FGHIGFAALNYIVHHPQL 255 (303)
T ss_dssp C-EECTT--------SSSSCHHHHHHHHTCTTC
T ss_pred C-CCCCC--------CCCCCHHHHHHHHhCcCc
Confidence 0 01122 478999999999997554
No 65
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=96.34 E-value=0.012 Score=56.19 Aligned_cols=167 Identities=13% Similarity=0.081 Sum_probs=99.1
Q ss_pred HHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEE--ecchhhhhhhhhhhhhccchhhhhhhhc
Q 012949 151 VELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVL--TPNLKVILQRSILFQQCHASVISSNLWV 228 (452)
Q Consensus 151 ~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l--~~~~~~~i~r~~~~~~~~~~~i~~~~~~ 228 (452)
.+-++.+ +.|++.+.+...- -.|+|.+.--..+++.+++.++..+-+. +-+..
T Consensus 16 ~~~i~~~-~~gad~lHvDvmD-G~fvpn~t~G~~~v~~lr~~~~~~~dvhLmv~dp~----------------------- 70 (231)
T 3ctl_A 16 KEQIEFI-DSHADYFHIDIMD-GHFVPNLTLSPFFVSQVKKLATKPLDCHLMVTRPQ----------------------- 70 (231)
T ss_dssp HHHHHHH-HTTCSCEEEEEEC-SSSSSCCCBCHHHHHHHHTTCCSCEEEEEESSCGG-----------------------
T ss_pred HHHHHHH-HcCCCEEEEEEEe-CccCccchhcHHHHHHHHhccCCcEEEEEEecCHH-----------------------
Confidence 4455667 8999987665211 1133444333457788887654444332 11111
Q ss_pred cHHhHHHHHHcCCCEEEEEecC-ChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHH
Q 012949 229 YLQGFEAAIAAGAKEVAIFASA-SEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAY 307 (452)
Q Consensus 229 ~~~~ie~a~~~Gi~~V~i~~s~-Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~ 307 (452)
+.++.++++|++.|.+..-+ ++ .+.+.++.+|++|.++.+.+. |. ++.+.+.+
T Consensus 71 --~~i~~~~~aGAd~itvh~Ea~~~----------------~~~~~i~~i~~~G~k~gv~ln-----p~---tp~~~~~~ 124 (231)
T 3ctl_A 71 --DYIAQLARAGADFITLHPETING----------------QAFRLIDEIRRHDMKVGLILN-----PE---TPVEAMKY 124 (231)
T ss_dssp --GTHHHHHHHTCSEEEECGGGCTT----------------THHHHHHHHHHTTCEEEEEEC-----TT---CCGGGGTT
T ss_pred --HHHHHHHHcCCCEEEECcccCCc----------------cHHHHHHHHHHcCCeEEEEEE-----CC---CcHHHHHH
Confidence 25788999999999876432 22 234678899999999875442 22 23344443
Q ss_pred HHHHHHHCCcCEEEE----cCCcCCCcHHHHHHHHHHHHHhCC----CccEEEEeCCCcCcHHHHHHHHHHcCCCEEe
Q 012949 308 VAKELHDMGCFEISL----GDTIGVGTPGTVVPMLEAVMAVVP----VEKLAVHLHDTYGQSLPNILISLQMGISTVD 377 (452)
Q Consensus 308 ~a~~l~~~Gad~I~L----~DT~G~~~P~~v~~li~~l~~~~p----~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD 377 (452)
+.. ++|.|.+ +-..|......+.+.|+.+++..+ ..+|++ |-|.-..|+-.++++||+.+=
T Consensus 125 ~l~-----~~D~VlvmsV~pGfggQ~f~~~~l~kI~~lr~~~~~~~~~~~I~V----dGGI~~~~~~~~~~aGAd~~V 193 (231)
T 3ctl_A 125 YIH-----KADKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEV----DGSCNQATYEKLMAAGADVFI 193 (231)
T ss_dssp TGG-----GCSEEEEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEE----ESCCSTTTHHHHHHHTCCEEE
T ss_pred HHh-----cCCEEEEeeeccCcCCccccHHHHHHHHHHHHHHhccCCCceEEE----ECCcCHHHHHHHHHcCCCEEE
Confidence 332 5787754 122243334455555666666542 345666 778888899999999999653
No 66
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=96.32 E-value=0.11 Score=47.58 Aligned_cols=167 Identities=18% Similarity=0.136 Sum_probs=95.1
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhcc-CCceeE--Eecchhhhhhhhhhhhhccchh
Q 012949 145 VPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLE-GARLPV--LTPNLKVILQRSILFQQCHASV 221 (452)
Q Consensus 145 ~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~-~~~l~~--l~~~~~~~i~r~~~~~~~~~~~ 221 (452)
.+.++-+++++.|.+ |++.||+|.+.+- .+..++++.+++.. +..+-+ .+-+. +
T Consensus 10 ~~~~~~~~~~~~~~~-~v~~iev~~~~~~------~~g~~~i~~l~~~~~~~~i~~~l~~~di-------------~--- 66 (207)
T 3ajx_A 10 LSTEAALELAGKVAE-YVDIIELGTPLIK------AEGLSVITAVKKAHPDKIVFADMKTMDA-------------G--- 66 (207)
T ss_dssp SCHHHHHHHHHHHGG-GCSEEEECHHHHH------HHCTHHHHHHHHHSTTSEEEEEEEECSC-------------H---
T ss_pred CCHHHHHHHHHHhhc-cCCEEEECcHHHH------hhCHHHHHHHHHhCCCCeEEEEEEecCc-------------c---
Confidence 577889999999998 9999999864210 11123566666542 433321 11110 0
Q ss_pred hhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCC
Q 012949 222 ISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIP 301 (452)
Q Consensus 222 i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d 301 (452)
...++.+.++|++.|.+.....+ +.+.++++.+++.|..+. ++. .+..+
T Consensus 67 --------~~~~~~a~~~Gad~v~vh~~~~~---------------~~~~~~~~~~~~~g~~~g--v~~------~s~~~ 115 (207)
T 3ajx_A 67 --------ELEADIAFKAGADLVTVLGSADD---------------STIAGAVKAAQAHNKGVV--VDL------IGIED 115 (207)
T ss_dssp --------HHHHHHHHHTTCSEEEEETTSCH---------------HHHHHHHHHHHHHTCEEE--EEC------TTCSS
T ss_pred --------HHHHHHHHhCCCCEEEEeccCCh---------------HHHHHHHHHHHHcCCceE--EEE------ecCCC
Confidence 11478899999999987665443 123456677788888753 221 12224
Q ss_pred HHHHHHHHHHHHHCCcCEEEE-c-CC---cCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEE
Q 012949 302 PSKVAYVAKELHDMGCFEISL-G-DT---IGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTV 376 (452)
Q Consensus 302 ~e~l~~~a~~l~~~Gad~I~L-~-DT---~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~V 376 (452)
|+.. ++.+.+.|+|.|.+ . -+ .|. .|.. +.++.+++. ..++.+ +-|.-..|.-.++++||+.|
T Consensus 116 p~~~---~~~~~~~g~d~v~~~~~~~~~~~g~-~~~~--~~i~~~~~~--~~pi~v----~GGI~~~~~~~~~~aGad~v 183 (207)
T 3ajx_A 116 KATR---AQEVRALGAKFVEMHAGLDEQAKPG-FDLN--GLLAAGEKA--RVPFSV----AGGVKVATIPAVQKAGAEVA 183 (207)
T ss_dssp HHHH---HHHHHHTTCSEEEEECCHHHHTSTT-CCTH--HHHHHHHHH--TSCEEE----ESSCCGGGHHHHHHTTCSEE
T ss_pred hHHH---HHHHHHhCCCEEEEEecccccccCC-CchH--HHHHHhhCC--CCCEEE----ECCcCHHHHHHHHHcCCCEE
Confidence 4442 23344568998733 1 11 232 2333 556666552 223433 23344458888999999966
Q ss_pred e
Q 012949 377 D 377 (452)
Q Consensus 377 D 377 (452)
=
T Consensus 184 v 184 (207)
T 3ajx_A 184 V 184 (207)
T ss_dssp E
T ss_pred E
Confidence 4
No 67
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=96.30 E-value=0.21 Score=48.92 Aligned_cols=168 Identities=16% Similarity=0.197 Sum_probs=98.9
Q ss_pred CccEEEeCCccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecCC-CCCcccccCCHHHHHHHH----Hhcc---CCc
Q 012949 125 RFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFV-SPKWVPQLADARDVMEAV----RDLE---GAR 196 (452)
Q Consensus 125 ~~V~I~D~TLRDG~Q~~~~~~~~~~k~~i~~~L~~~Gv~~IEvG~~~-s~~~~p~~~D~e~v~~~i----~~~~---~~~ 196 (452)
.-+-|+.+|+ |-.+--+...+.+..++.++.+.+.|.+.|++|.-+ .|...| + ..++.++++ +.+. ++.
T Consensus 16 ~imGilN~Tp-dSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~-v-~~~eE~~rv~pvi~~l~~~~~~p 92 (282)
T 1aj0_A 16 HVMGILNVTP-DSFSDGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAE-V-SVEEELQRVIPVVEAIAQRFEVW 92 (282)
T ss_dssp EEEEEEECCT-TTSCCCCCCTHHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCC-C-CHHHHHHHHHHHHHHHHHHCCCE
T ss_pred EEEEEEeCCC-CccccccccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCc-C-CHHHHHHHHHHHHHHHHhhcCCe
Confidence 3355677777 333222334688999999999999999999999743 343222 1 222333332 3221 444
Q ss_pred eeEEecchhhhhhhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHH
Q 012949 197 LPVLTPNLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHA 276 (452)
Q Consensus 197 l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~ 276 (452)
+++=+.. .+-+++|+++|++.|.=.....+ .++++.
T Consensus 93 iSIDT~~--------------------------~~va~aAl~aGa~iINdvsg~~d------------------~~~~~~ 128 (282)
T 1aj0_A 93 ISVDTSK--------------------------PEVIRESAKVGAHIINDIRSLSE------------------PGALEA 128 (282)
T ss_dssp EEEECCC--------------------------HHHHHHHHHTTCCEEEETTTTCS------------------TTHHHH
T ss_pred EEEeCCC--------------------------HHHHHHHHHcCCCEEEECCCCCC------------------HHHHHH
Confidence 4332222 24778999999998764322111 244566
Q ss_pred HHhCCCcEEEEEEeeecCCCCCCCC----------HHHHHHHHHHHHHCCcC--EEEEcCCcCCC---cHHHHHHHHHHH
Q 012949 277 AKVLSIPVRGYVSCVVGCPVEGAIP----------PSKVAYVAKELHDMGCF--EISLGDTIGVG---TPGTVVPMLEAV 341 (452)
Q Consensus 277 Ak~~G~~V~~~l~~~~g~p~~~r~d----------~e~l~~~a~~l~~~Gad--~I~L~DT~G~~---~P~~v~~li~~l 341 (452)
+++.|..+. ++..-|.|..-... .+++.+.++.+.++|++ .|.| |. |.+ ++++-.++++.+
T Consensus 129 ~a~~~~~vV--lmh~~G~p~tm~~~~~y~d~~~ev~~~l~~~i~~a~~~Gi~~~~Iil-DP-g~gf~k~~~~n~~ll~~l 204 (282)
T 1aj0_A 129 AAETGLPVC--LMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEQAGIAKEKLLL-DP-GFGFGKNLSHNYSLLARL 204 (282)
T ss_dssp HHHHTCCEE--EECCSSCTTCCSCCCCCSCHHHHHHHHHHHHHHHHHHTTCCGGGEEE-EC-CTTSSCCHHHHHHHHHTG
T ss_pred HHHhCCeEE--EEccCCCCccccccCccchHHHHHHHHHHHHHHHHHHcCCChhhEEE-eC-CCCcccCHHHHHHHHHHH
Confidence 778888775 55543433321111 56777888889999987 6766 54 322 355666677766
Q ss_pred HH
Q 012949 342 MA 343 (452)
Q Consensus 342 ~~ 343 (452)
..
T Consensus 205 ~~ 206 (282)
T 1aj0_A 205 AE 206 (282)
T ss_dssp GG
T ss_pred HH
Confidence 53
No 68
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=96.30 E-value=0.15 Score=49.46 Aligned_cols=173 Identities=13% Similarity=0.106 Sum_probs=97.0
Q ss_pred ccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhcc---CCceeEEecchhhhhhh
Q 012949 134 PRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLE---GARLPVLTPNLKVILQR 210 (452)
Q Consensus 134 LRDG~Q~~~~~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~---~~~l~~l~~~~~~~i~r 210 (452)
+.||.+. .+.+..++.++.+.+.|-+.|++|....+ ....+++.+.++.+. ++.+++=+..
T Consensus 15 Fsdgg~~----~~~~~a~~~a~~~v~~GAdiIDIg~g~~~-----v~~~ee~~rvv~~i~~~~~~pisIDT~~------- 78 (262)
T 1f6y_A 15 IKRAIQE----RDPAPVQEWARRQEEGGARALDLNVGPAV-----QDKVSAMEWLVEVTQEVSNLTLCLDSTN------- 78 (262)
T ss_dssp HHHHHHH----TCHHHHHHHHHHHHHHTCSEEEEBCC---------CHHHHHHHHHHHHHTTCCSEEEEECSC-------
T ss_pred HHHhhhc----CCHHHHHHHHHHHHHCCCcEEEECCCCCC-----CChHHHHHHHHHHHHHhCCCeEEEeCCC-------
Confidence 5566553 57899999999999999999999974322 122344444444332 3333322221
Q ss_pred hhhhhhccchhhhhhhhccHHhHHHHHHc--CCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEE
Q 012949 211 SILFQQCHASVISSNLWVYLQGFEAAIAA--GAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYV 288 (452)
Q Consensus 211 ~~~~~~~~~~~i~~~~~~~~~~ie~a~~~--Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l 288 (452)
.+-+++|+++ |.+.|.=.... + +.+.++.+.+++.|..+. +
T Consensus 79 -------------------~~v~~aAl~a~~Ga~iINdvs~~-~---------------d~~~~~~~~~a~~~~~vv--l 121 (262)
T 1f6y_A 79 -------------------IKAIEAGLKKCKNRAMINSTNAE-R---------------EKVEKLFPLAVEHGAALI--G 121 (262)
T ss_dssp -------------------HHHHHHHHHHCSSCEEEEEECSC-H---------------HHHHHHHHHHHHTTCEEE--E
T ss_pred -------------------HHHHHHHHhhCCCCCEEEECCCC-c---------------ccHHHHHHHHHHhCCcEE--E
Confidence 2366788888 88776522211 1 333456677888898664 4
Q ss_pred Eee--ecCCCCCCCCHHHHHHHHHHHHHCCcC--EEEEcCC-cC---CC--cHHHHHHHHHHHHHhC-CCccEEEEeCCC
Q 012949 289 SCV--VGCPVEGAIPPSKVAYVAKELHDMGCF--EISLGDT-IG---VG--TPGTVVPMLEAVMAVV-PVEKLAVHLHDT 357 (452)
Q Consensus 289 ~~~--~g~p~~~r~d~e~l~~~a~~l~~~Gad--~I~L~DT-~G---~~--~P~~v~~li~~l~~~~-p~~~l~vH~Hnd 357 (452)
+.. -|.|......++++.+.++.+.++|++ .|.| |. +| .. ...++-+.++.+++.+ |+.|+-+=.+|-
T Consensus 122 mh~~~~G~p~t~~~~~~~~~~~~~~a~~~Gi~~~~Iil-DPg~g~~g~~~~~~~~~l~~l~~l~~~~~pg~pvl~G~Srk 200 (262)
T 1f6y_A 122 LTMNKTGIPKDSDTRLAFAMELVAAADEFGLPMEDLYI-DPLILPANVAQDHAPEVLKTLQQIKMLADPAPKTVLGLSNV 200 (262)
T ss_dssp ESCCSSCSCSSHHHHHHHHHHHHHHHHHHTCCGGGEEE-ECCCCCTTTCTTHHHHHHHHHHHHHTCCSSCCEEEEEGGGG
T ss_pred EcCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCcccEEE-eCCCCcCCCChHHHHHHHHHHHHHHHHhCCCCCEEEeecCC
Confidence 442 122211111235667777888899985 5666 54 22 21 1234444456666656 666766655553
Q ss_pred -cCc
Q 012949 358 -YGQ 360 (452)
Q Consensus 358 -~Gl 360 (452)
+|+
T Consensus 201 sfg~ 204 (262)
T 1f6y_A 201 SQNC 204 (262)
T ss_dssp GTTC
T ss_pred cCCC
Confidence 453
No 69
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=96.30 E-value=0.03 Score=52.41 Aligned_cols=173 Identities=14% Similarity=0.135 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEe-cchhhhhhhhhhhhhccchhhhhhh
Q 012949 148 GVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLT-PNLKVILQRSILFQQCHASVISSNL 226 (452)
Q Consensus 148 ~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~-~~~~~~i~r~~~~~~~~~~~i~~~~ 226 (452)
+...+.++.+.+.|++.|+++..-.+ ++|.+....+..+.+++..+..+.+.+ -+ + +
T Consensus 23 ~~~~~~i~~~~~~G~d~i~l~~~dg~-f~~~~~~~~~~i~~l~~~~~~~~~v~l~vn------------d-~-------- 80 (230)
T 1rpx_A 23 SKLGEQVKAIEQAGCDWIHVDVMDGR-FVPNITIGPLVVDSLRPITDLPLDVHLMIV------------E-P-------- 80 (230)
T ss_dssp GGHHHHHHHHHHTTCCCEEEEEEBSS-SSSCBCCCHHHHHHHGGGCCSCEEEEEESS------------S-H--------
T ss_pred HHHHHHHHHHHHCCCCEEEEeeccCC-cccccccCHHHHHHHHhccCCcEEEEEEec------------C-H--------
Confidence 45677888999999999999841000 122222223456666654433332211 00 0 0
Q ss_pred hccHHhHHHHHHcCCCEEEEEec--CChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHH
Q 012949 227 WVYLQGFEAAIAAGAKEVAIFAS--ASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSK 304 (452)
Q Consensus 227 ~~~~~~ie~a~~~Gi~~V~i~~s--~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~ 304 (452)
.+.++.+.++|++.|.+... .++ ...+.++.+++.|+.+...+. |. ++.+.
T Consensus 81 ---~~~v~~~~~~Gad~v~vh~~~~~~~----------------~~~~~~~~~~~~g~~ig~~~~-----p~---t~~e~ 133 (230)
T 1rpx_A 81 ---DQRVPDFIKAGADIVSVHCEQSSTI----------------HLHRTINQIKSLGAKAGVVLN-----PG---TPLTA 133 (230)
T ss_dssp ---HHHHHHHHHTTCSEEEEECSTTTCS----------------CHHHHHHHHHHTTSEEEEEEC-----TT---CCGGG
T ss_pred ---HHHHHHHHHcCCCEEEEEecCccch----------------hHHHHHHHHHHcCCcEEEEeC-----CC---CCHHH
Confidence 12688899999999987764 332 123556777788887653332 11 22333
Q ss_pred HHHHHHHHHHCCcCEEEEcCCcC--C---CcHHHHHHHHHHHHHhCC----CccEEEEeCCCcCcHHHHHHHHHHcCCCE
Q 012949 305 VAYVAKELHDMGCFEISLGDTIG--V---GTPGTVVPMLEAVMAVVP----VEKLAVHLHDTYGQSLPNILISLQMGIST 375 (452)
Q Consensus 305 l~~~a~~l~~~Gad~I~L~DT~G--~---~~P~~v~~li~~l~~~~p----~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~ 375 (452)
+..+ ..++|.|. .++++ . -.+....+.++.+++..+ ..++.+ +.|....|.-.++++||+.
T Consensus 134 ~~~~-----~~~~d~vl-~~~~~pg~~g~~~~~~~~~~i~~l~~~~~~~~~~~pi~v----~GGI~~~n~~~~~~aGad~ 203 (230)
T 1rpx_A 134 IEYV-----LDAVDLVL-IMSVNPGFGGQSFIESQVKKISDLRKICAERGLNPWIEV----DGGVGPKNAYKVIEAGANA 203 (230)
T ss_dssp GTTT-----TTTCSEEE-EESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEE----ESSCCTTTHHHHHHHTCCE
T ss_pred HHHH-----HhhCCEEE-EEEEcCCCCCccccHHHHHHHHHHHHHHHhcCCCceEEE----ECCCCHHHHHHHHHcCCCE
Confidence 3222 24688664 45552 2 122334455566665442 334444 4555567888889999998
Q ss_pred Eeec
Q 012949 376 VDCS 379 (452)
Q Consensus 376 VD~S 379 (452)
|.+.
T Consensus 204 vvvg 207 (230)
T 1rpx_A 204 LVAG 207 (230)
T ss_dssp EEES
T ss_pred EEEC
Confidence 8776
No 70
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=96.29 E-value=0.029 Score=55.69 Aligned_cols=203 Identities=18% Similarity=0.130 Sum_probs=127.2
Q ss_pred cCCCCCC--CCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhc-c-CCceeEEecchhhhhhhhh
Q 012949 137 GLQNEKN--TVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDL-E-GARLPVLTPNLKVILQRSI 212 (452)
Q Consensus 137 G~Q~~~~--~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~-~-~~~l~~l~~~~~~~i~r~~ 212 (452)
+.+..+. ..+.+....+++...+.+-+.|--.+...-++. ..+.+...++.. . ...+++.+.. .
T Consensus 15 ~~yAV~AfNv~n~e~~~avi~AAee~~sPvIlq~s~g~~~y~----g~~~~~~~v~~aa~~~~~VPValHL-D------- 82 (307)
T 3n9r_A 15 EGYGVGAFNFVNFEMLNAIFEAGNEENSPLFIQASEGAIKYM----GIDMAVGMVKIMCERYPHIPVALHL-D------- 82 (307)
T ss_dssp HTCCEEEEECSSHHHHHHHHHHHHHHTCCEEEEEEHHHHHHH----CHHHHHHHHHHHHHHSTTSCEEEEE-E-------
T ss_pred cCceEEEEeeCCHHHHHHHHHHHHHhCCCEEEEcChhhhhhC----CHHHHHHHHHHHHHhcCCCcEEEEC-C-------
Confidence 4444432 478899999999999999997765543211111 112222333221 1 1233332210 0
Q ss_pred hhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeee
Q 012949 213 LFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVV 292 (452)
Q Consensus 213 ~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~ 292 (452)
.+ ...+.+..|+++|..-|.+=.|. .+.+|.++.-++++++|++.|+.|.+.|-..-
T Consensus 83 ---Hg----------~~~e~~~~ai~~GFtSVMiDgS~----------~p~eeNi~~Tk~vv~~ah~~gvsVEaELG~ig 139 (307)
T 3n9r_A 83 ---HG----------TTFESCEKAVKAGFTSVMIDASH----------HAFEENLELTSKVVKMAHNAGVSVEAELGRLM 139 (307)
T ss_dssp ---EE----------CSHHHHHHHHHHTCSEEEECCTT----------SCHHHHHHHHHHHHHHHHHTTCEEEEEESCCC
T ss_pred ---CC----------CCHHHHHHHHHhCCCcEEEECCC----------CCHHHHHHHHHHHHHHHHHcCCeEEEEeeeec
Confidence 01 02357888999999988874442 25689999999999999999999998887754
Q ss_pred cCCCC--------CCCCHHHHHHHHHHHHHCCcCEEEEc--CCcCCC----cHHHHHHHHHHHHHhCCCccEEEEeC---
Q 012949 293 GCPVE--------GAIPPSKVAYVAKELHDMGCFEISLG--DTIGVG----TPGTVVPMLEAVMAVVPVEKLAVHLH--- 355 (452)
Q Consensus 293 g~p~~--------~r~d~e~l~~~a~~l~~~Gad~I~L~--DT~G~~----~P~~v~~li~~l~~~~p~~~l~vH~H--- 355 (452)
|.++. ..++|+...+++++ .|+|.+.++ -.=|.- .|.-=.++++.+++ .+++||.+|.=
T Consensus 140 G~Ed~~~~~~~~~~yT~Peea~~Fv~~---TgvD~LAvaiGt~HG~Yk~~~~p~Ld~~~L~~I~~-~~~~PLVlHGgS~v 215 (307)
T 3n9r_A 140 GIEDNISVDEKDAVLVNPKEAEQFVKE---SQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEVKR-LTNIPLVLHGASAI 215 (307)
T ss_dssp CC----------CCSCCHHHHHHHHHH---HCCSEEEECSSCCSSSBCCSSSCCCCHHHHHHHHH-HHCSCEEESSCCCC
T ss_pred cccCCcccccccccCCCHHHHHHHHHH---HCCCEEEEecCCcccccCCCCCCccCHHHHHHHHh-cCCCCeEEeCCCCc
Confidence 54432 24789988888765 489976654 222322 23222344555544 34568999974
Q ss_pred ----------------CCcCcHHHHHHHHHHcCCCEEee
Q 012949 356 ----------------DTYGQSLPNILISLQMGISTVDC 378 (452)
Q Consensus 356 ----------------nd~GlA~ANaLaAl~aGa~~VD~ 378 (452)
++.|........|+..|+.-|+.
T Consensus 216 p~~~~~~~~~~gg~~~~~~G~p~e~i~~ai~~GV~KiNi 254 (307)
T 3n9r_A 216 PDNVRKSYLDAGGDLKGSKGVPFEFLQESVKGGINKVNT 254 (307)
T ss_dssp CHHHHHHHHHTTCCCTTCBCCCHHHHHHHHHTTEEEEEE
T ss_pred chHHHHHHHHhcCccCCCCCCCHHHHHHHHHcCceEEEe
Confidence 47799999999999999886643
No 71
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=96.25 E-value=0.0048 Score=59.50 Aligned_cols=170 Identities=16% Similarity=0.125 Sum_probs=100.4
Q ss_pred CHHHHHHHHHHHHHCCCCEEEE----ecCCCCCcccccCCHHHHHHHHHhcc-CCceeE-Eecchhhhhhhhhhhhhccc
Q 012949 146 PTGVKVELIRRLVSSGLPVVEA----TSFVSPKWVPQLADARDVMEAVRDLE-GARLPV-LTPNLKVILQRSILFQQCHA 219 (452)
Q Consensus 146 ~~~~k~~i~~~L~~~Gv~~IEv----G~~~s~~~~p~~~D~e~v~~~i~~~~-~~~l~~-l~~~~~~~i~r~~~~~~~~~ 219 (452)
+...-.+-++.|.++|++.+-+ |.|+ |.+.--..+++.+++.. +..+-+ |..+-
T Consensus 38 D~~~L~~~i~~l~~~G~d~lHvDVmDg~FV-----pnit~G~~~v~~lr~~~p~~~ldvHLmv~~--------------- 97 (246)
T 3inp_A 38 DLARLGDDVKAVLAAGADNIHFDVMDNHYV-----PNLTFGPMVLKALRDYGITAGMDVHLMVKP--------------- 97 (246)
T ss_dssp CGGGHHHHHHHHHHTTCCCEEEEEEBSSSS-----SCBCCCHHHHHHHHHHTCCSCEEEEEECSS---------------
T ss_pred ChhhHHHHHHHHHHcCCCEEEEEecCCCcC-----cchhcCHHHHHHHHHhCCCCeEEEEEeeCC---------------
Confidence 4444566778888999996666 5544 44443346788887654 554444 22110
Q ss_pred hhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCC
Q 012949 220 SVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGA 299 (452)
Q Consensus 220 ~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r 299 (452)
..+.++.++++|++.|.+-.-+. +.+.+.++.+|+.|.++.+.+. |.
T Consensus 98 ---------p~~~i~~~~~aGAd~itvH~Ea~----------------~~~~~~i~~ir~~G~k~Gvaln-----p~--- 144 (246)
T 3inp_A 98 ---------VDALIESFAKAGATSIVFHPEAS----------------EHIDRSLQLIKSFGIQAGLALN-----PA--- 144 (246)
T ss_dssp ---------CHHHHHHHHHHTCSEEEECGGGC----------------SCHHHHHHHHHTTTSEEEEEEC-----TT---
T ss_pred ---------HHHHHHHHHHcCCCEEEEccccc----------------hhHHHHHHHHHHcCCeEEEEec-----CC---
Confidence 01267888999999999865322 2235677888999998875443 21
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEE----cCCcCCCcHHHHHHHHHHHHHhC----CCccEEEEeCCCcCcHHHHHHHHHHc
Q 012949 300 IPPSKVAYVAKELHDMGCFEISL----GDTIGVGTPGTVVPMLEAVMAVV----PVEKLAVHLHDTYGQSLPNILISLQM 371 (452)
Q Consensus 300 ~d~e~l~~~a~~l~~~Gad~I~L----~DT~G~~~P~~v~~li~~l~~~~----p~~~l~vH~Hnd~GlA~ANaLaAl~a 371 (452)
++.+.+.++.. .+|.|.+ +...|...-....+.|+.+++.. .+.+|++ |-|....|+-.++++
T Consensus 145 Tp~e~l~~~l~-----~vD~VlvMsV~PGfgGQ~fi~~~l~KI~~lr~~~~~~~~~~~I~V----DGGI~~~ti~~~~~a 215 (246)
T 3inp_A 145 TGIDCLKYVES-----NIDRVLIMSVNPGFGGQKFIPAMLDKAKEISKWISSTDRDILLEI----DGGVNPYNIAEIAVC 215 (246)
T ss_dssp CCSGGGTTTGG-----GCSEEEEECSCTTC--CCCCTTHHHHHHHHHHHHHHHTSCCEEEE----ESSCCTTTHHHHHTT
T ss_pred CCHHHHHHHHh-----cCCEEEEeeecCCCCCcccchHHHHHHHHHHHHHHhcCCCeeEEE----ECCcCHHHHHHHHHc
Confidence 23344433332 3676654 33444322233334455555533 2345665 567777788999999
Q ss_pred CCCEEe
Q 012949 372 GISTVD 377 (452)
Q Consensus 372 Ga~~VD 377 (452)
||+.+=
T Consensus 216 GAD~~V 221 (246)
T 3inp_A 216 GVNAFV 221 (246)
T ss_dssp TCCEEE
T ss_pred CCCEEE
Confidence 999653
No 72
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=96.24 E-value=0.31 Score=47.00 Aligned_cols=241 Identities=12% Similarity=0.066 Sum_probs=140.4
Q ss_pred cCCCCccEEEeCCccccCCCCCC---CCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccC--C
Q 012949 121 KGIPRFVKIVEVGPRDGLQNEKN---TVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEG--A 195 (452)
Q Consensus 121 ~~~p~~V~I~D~TLRDG~Q~~~~---~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~--~ 195 (452)
+.|.+.|+|-++++=+|.-..-. .-+.++.++-++.+...|.|.||+-...- ....+.+++.+.+..+.. .
T Consensus 2 ~~m~~~v~v~~~~ig~g~PkIcvpl~~~t~~e~l~~a~~~~~~~aD~vElR~D~l----~~~~~~~~v~~~l~~lr~~~~ 77 (258)
T 4h3d_A 2 NAMKRKVQVKNITIGEGRPKICVPIIGKNKKDIIKEAKELKDACLDIIEWRVDFF----ENVENIKEVKEVLYELRSYIH 77 (258)
T ss_dssp --CCCCEEETTEEETSSSCEEEEEECCSSHHHHHHHHHHHTTSSCSEEEEEGGGC----TTTTCHHHHHHHHHHHHHHCT
T ss_pred CCCcceEEEcCEEeCCCCCEEEEEeCCCCHHHHHHHHHHHhhcCCCEEEEeeccc----cccCCHHHHHHHHHHHHHhcC
Confidence 46788899999999777532211 23567777788888899999999985422 112345555555543211 1
Q ss_pred ceeEEe--cchhhhhhhhhhhhhccchhhhhhhhccHHhHHHHHHcC-CCEEEEEecCChHHHhhhcCCCHHHHHHHHHH
Q 012949 196 RLPVLT--PNLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAG-AKEVAIFASASEAFSKSNINCSIEDSLVRYRA 272 (452)
Q Consensus 196 ~l~~l~--~~~~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~G-i~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~ 272 (452)
.++++. +...+ =|.....++ .+.+-++.+++.| ++.|.+-....+ +...+
T Consensus 78 ~lPiI~T~Rt~~E-----GG~~~~~~~-------~~~~ll~~~~~~~~~d~iDvEl~~~~---------------~~~~~ 130 (258)
T 4h3d_A 78 DIPLLFTFRSVVE-----GGEKLISRD-------YYTTLNKEISNTGLVDLIDVELFMGD---------------EVIDE 130 (258)
T ss_dssp TSCEEEECCCGGG-----TCSCCCCHH-------HHHHHHHHHHHTTCCSEEEEEGGGCH---------------HHHHH
T ss_pred CCCEEEEEechhh-----CCCCCCCHH-------HHHHHHHHHHhcCCchhhHHhhhccH---------------HHHHH
Confidence 233332 22210 000000000 0123456667776 899998876543 23346
Q ss_pred HHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHH---hCCCcc
Q 012949 273 VAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMA---VVPVEK 349 (452)
Q Consensus 273 ~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~---~~p~~~ 349 (452)
+++.+++.|.+|. +|+=. +....+.+.+....+.+.+.|||.+-|+=+. -++.++.+++....+ ..++.|
T Consensus 131 l~~~a~~~~~kiI--~S~Hd---f~~TP~~~el~~~~~~~~~~gaDIvKia~~~--~~~~D~l~Ll~~~~~~~~~~~~~P 203 (258)
T 4h3d_A 131 VVNFAHKKEVKVI--ISNHD---FNKTPKKEEIVSRLCRMQELGADLPKIAVMP--QNEKDVLVLLEATNEMFKIYADRP 203 (258)
T ss_dssp HHHHHHHTTCEEE--EEEEE---SSCCCCHHHHHHHHHHHHHTTCSEEEEEECC--SSHHHHHHHHHHHHHHHHHTCSSC
T ss_pred HHHHHHhCCCEEE--EEEec---CCCCCCHHHHHHHHHHHHHhCCCEEEEEEcc--CCHHHHHHHHHHHHHHHHhcCCCC
Confidence 7788889998876 33210 1222345788889999999999999997553 467888777766543 345545
Q ss_pred EEEEeCCCcCcHHHHHHHHHHcCCCEEeecccCCCCCCCCCCCCCcccHHHHHHHHHcC
Q 012949 350 LAVHLHDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGL 408 (452)
Q Consensus 350 l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~Sv~GlGecP~a~graGNaalE~vv~~L~~~ 408 (452)
+-.-+=-.. +.-.=+.+-..|-....+++. + |-| .|+.+++++-..|+.+
T Consensus 204 ~I~~~MG~~--G~~SRi~~~~fGS~lTf~~~~---~-~sA---PGQl~~~el~~~l~lL 253 (258)
T 4h3d_A 204 IITMSMSGM--GVISRLCGEIFGSALTFGAAK---S-VSA---PGQISFKELNSVLNLL 253 (258)
T ss_dssp BEEEECTGG--GGGGGTCHHHHCBCEEECBCC-------C---TTCCBHHHHHHHHHHH
T ss_pred EEEEeCCCC--ChHHHHHHHHhCCceEeccCC---C-CCC---CCCCCHHHHHHHHHHH
Confidence 543332222 233344555677777777653 3 334 5599999988877653
No 73
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=96.23 E-value=0.026 Score=56.18 Aligned_cols=152 Identities=15% Similarity=0.131 Sum_probs=91.2
Q ss_pred CCCC-ccEEEeCCcc---ccCCCCCCCCCH-HHHHHHHHHHHHCCCCEEEEecC-CCCCcccccCCHHHHHHHHHhc---
Q 012949 122 GIPR-FVKIVEVGPR---DGLQNEKNTVPT-GVKVELIRRLVSSGLPVVEATSF-VSPKWVPQLADARDVMEAVRDL--- 192 (452)
Q Consensus 122 ~~p~-~V~I~D~TLR---DG~Q~~~~~~~~-~~k~~i~~~L~~~Gv~~IEvG~~-~s~~~~p~~~D~e~v~~~i~~~--- 192 (452)
+-|. -+.|+|+|+= ||.+.. ..+. +..++.++.+.+.|.+.|++|.- ..|...+ .+.++.++.++.+
T Consensus 45 ~~p~i~m~I~n~tpdsf~d~i~~~--~~~~~~~~~~~A~~~v~~GAdiIDIg~~StrP~~~~--vs~eee~~vV~~v~~~ 120 (310)
T 2h9a_B 45 NPPRFALEVFDTPPTDWPDILVEP--FKDVINDPVAWAKKCVEYGADIVALRLVSAHPDGQN--RSGAELAEVCKAVADA 120 (310)
T ss_dssp SCCEEEEEEESSCCSSCCHHHHGG--GTTTTTCHHHHHHHHHHTTCSEEEEECGGGCTTTTC--CCHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEeeCCCcccchhhhhh--hccHHHHHHHHHHHHHHcCCcEEEEeCccCCCCCCC--CCHHHHHHHHHHHHHh
Confidence 3344 4679999885 662221 1222 67788889999999999999974 3343221 2455666666543
Q ss_pred cCCceeE-EecchhhhhhhhhhhhhccchhhhhhhhccHHhHHHHHHcCCC---EEEEEecCChHHHhhhcCCCHHHHHH
Q 012949 193 EGARLPV-LTPNLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAK---EVAIFASASEAFSKSNINCSIEDSLV 268 (452)
Q Consensus 193 ~~~~l~~-l~~~~~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~---~V~i~~s~Sd~~~~~~~~~s~e~~l~ 268 (452)
.++.+++ =+-+.+ . ..+-+++|+++|.+ .|.=. |. .
T Consensus 121 ~~vplsI~DT~~~~-----------~-----------~~~V~eaal~aga~~k~iINdv---s~---------------~ 160 (310)
T 2h9a_B 121 IDVPLMIIGCGVEE-----------K-----------DAEIFPVIGEALSGRNCLLSSA---TK---------------D 160 (310)
T ss_dssp CSSCEEEECCSCHH-----------H-----------HHHHHHHHHHHTTTSCCEEEEE---CT---------------T
T ss_pred CCceEEEECCCCCC-----------C-----------CHHHHHHHHHhCCCCCCEEEEC---CC---------------C
Confidence 2444433 121111 0 12367889999987 44322 22 0
Q ss_pred HHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHHHHHHCCc--CEEEEcCCcC
Q 012949 269 RYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGC--FEISLGDTIG 327 (452)
Q Consensus 269 ~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Ga--d~I~L~DT~G 327 (452)
+..++...|++.|..+. ++. + -|.+++.+..+.+.++|+ +.|.|==.+|
T Consensus 161 ~~~~~~~~aa~~g~~vv--~m~----~----~dv~~l~~~~~~a~~~Gi~~e~IilDPg~g 211 (310)
T 2h9a_B 161 NYKPIVATCMVHGHSVV--ASA----P----LDINLSKQLNIMIMEMNLAPNRIIMDPLIG 211 (310)
T ss_dssp THHHHHHHHHHHTCEEE--EEC----S----SCHHHHHHHHHHHHTTTCCGGGEEEECCCC
T ss_pred ccHHHHHHHHHhCCCEE--EEC----h----hHHHHHHHHHHHHHHCCCChhhEEEeCCCc
Confidence 22455677788898765 332 1 156889999999999998 5777733445
No 74
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=96.18 E-value=0.21 Score=47.67 Aligned_cols=129 Identities=18% Similarity=0.176 Sum_probs=83.1
Q ss_pred HhHHHHHHcCCCEE--EEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHH
Q 012949 231 QGFEAAIAAGAKEV--AIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYV 308 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V--~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~ 308 (452)
+.++.|++.|++.| .+..... +.++.++.+.++++.+++.|+++.+.+ ...|.......+++.+.++
T Consensus 103 ~~v~~a~~~Ga~~v~~~l~~~~~----------~~~~~~~~~~~v~~~~~~~g~~viv~~-~~~G~~l~~~~~~~~~~~~ 171 (273)
T 2qjg_A 103 TTVEEAIRMGADAVSIHVNVGSD----------EDWEAYRDLGMIAETCEYWGMPLIAMM-YPRGKHIQNERDPELVAHA 171 (273)
T ss_dssp SCHHHHHHTTCSEEEEEEEETST----------THHHHHHHHHHHHHHHHHHTCCEEEEE-EECSTTCSCTTCHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEEecCCC----------CHHHHHHHHHHHHHHHHHcCCCEEEEe-CCCCcccCCCCCHhHHHHH
Confidence 37889999999999 5544422 345677888899999999999886542 1222111011456677777
Q ss_pred HHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCc---CcHHHHHHHHHHcCCCEEee
Q 012949 309 AKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTY---GQSLPNILISLQMGISTVDC 378 (452)
Q Consensus 309 a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~---GlA~ANaLaAl~aGa~~VD~ 378 (452)
++.+.++|+|.|.+.-+ ..++ +++.+++..+ +++-.|.=-+. -.++.....++++||+.|-.
T Consensus 172 a~~a~~~Gad~i~~~~~---~~~~----~l~~i~~~~~-ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~v 236 (273)
T 2qjg_A 172 ARLGAELGADIVKTSYT---GDID----SFRDVVKGCP-APVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAV 236 (273)
T ss_dssp HHHHHHTTCSEEEECCC---SSHH----HHHHHHHHCS-SCEEEECCSCCSSHHHHHHHHHHHHHHTCSEEEC
T ss_pred HHHHHHcCCCEEEECCC---CCHH----HHHHHHHhCC-CCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEe
Confidence 78999999999988743 2333 4555555554 46666653222 22333366777899986654
No 75
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=96.08 E-value=0.31 Score=45.98 Aligned_cols=214 Identities=14% Similarity=0.115 Sum_probs=103.2
Q ss_pred HHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEec-chhhhhhhhhhhhhccchhhhhhhhcc
Q 012949 151 VELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTP-NLKVILQRSILFQQCHASVISSNLWVY 229 (452)
Q Consensus 151 ~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~-~~~~~i~r~~~~~~~~~~~i~~~~~~~ 229 (452)
.+.++.+.++|++.||+.......+.+ .+.+++.+.++. .++++.++.+ ... ..+.......-+......
T Consensus 20 ~~~l~~~~~~G~~~vEl~~~~~~~~~~--~~~~~~~~~l~~-~gl~~~~~~~~~~~------~~l~~~d~~~r~~~~~~~ 90 (290)
T 2qul_A 20 PATAKRIAGLGFDLMEISLGEFHNLSD--AKKRELKAVADD-LGLTVMCCIGLKSE------YDFASPDKSVRDAGTEYV 90 (290)
T ss_dssp HHHHHHHHHTTCSEEEEESTTGGGSCH--HHHHHHHHHHHH-HTCEEEEEEEECGG------GCTTCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEecCCccccch--hhHHHHHHHHHH-cCCceEEecCCCCC------CCCCCCCHHHHHHHHHHH
Confidence 456667778999999997542111000 122333333332 3566655431 100 000000000000000012
Q ss_pred HHhHHHHHHcCCCEEEEEe----cCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHH
Q 012949 230 LQGFEAAIAAGAKEVAIFA----SASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKV 305 (452)
Q Consensus 230 ~~~ie~a~~~Gi~~V~i~~----s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l 305 (452)
.+.++.|.+.|++.|.+.. ...............+...+.+.++.++|++.|+++. +...-..+...-.+++.+
T Consensus 91 ~~~i~~a~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~--lEn~~~~~~~~~~~~~~~ 168 (290)
T 2qul_A 91 KRLLDDCHLLGAPVFAGLTFCAWPQSPPLDMKDKRPYVDRAIESVRRVIKVAEDYGIIYA--LEVVNRFEQWLCNDAKEA 168 (290)
T ss_dssp HHHHHHHHHHTCSEEEEEEEEESSCCCCTTCCCCHHHHHHHHHHHHTTHHHHHHHTCEEE--EECCCTTTCSSCCSHHHH
T ss_pred HHHHHHHHHcCCCEEEeeccccCCcccCCCcccHHHHHHHHHHHHHHHHHHHHHcCCEEE--EEeCccccccccCCHHHH
Confidence 3477888889999988643 1100000000001134455666677788999998754 332110011112366777
Q ss_pred HHHHHHHHHCCcC--EEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEeecccCC
Q 012949 306 AYVAKELHDMGCF--EISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCSVAGL 383 (452)
Q Consensus 306 ~~~a~~l~~~Gad--~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~Sv~Gl 383 (452)
.++++.+ +.+ .+++ |+.=...-. .+..+.+++ +.+-...+|.||..+ .-+
T Consensus 169 ~~l~~~~---~~~~~g~~~-D~~h~~~~g--~d~~~~l~~-~~~~i~~vH~~D~~~---------------------~~~ 220 (290)
T 2qul_A 169 IAFADAV---DSPACKVQL-DTFHMNIEE--TSFRDAILA-CKGKMGHFHLGEANR---------------------LPP 220 (290)
T ss_dssp HHHHHHH---CCTTEEEEE-EHHHHHHHC--SCHHHHHHH-TTTTEEEEEECCTTS---------------------CCT
T ss_pred HHHHHHc---CCCCEEEEE-EchhhhhcC--CCHHHHHHH-HHhheeEEEEccCCC---------------------CCC
Confidence 7776554 322 3333 762111100 012233333 333347899998742 012
Q ss_pred CCCCCCCCCCCcccHHHHHHHHHcCCCC
Q 012949 384 GGCPYAKGASGNVATEDVVYMLSGLGVE 411 (452)
Q Consensus 384 GecP~a~graGNaalE~vv~~L~~~Gi~ 411 (452)
| .|..+.+.++..|+..|++
T Consensus 221 G--------~G~id~~~~~~~L~~~gy~ 240 (290)
T 2qul_A 221 G--------EGRLPWDEIFGALKEIGYD 240 (290)
T ss_dssp T--------SSCSCHHHHHHHHHHTTCC
T ss_pred C--------CCCcCHHHHHHHHHHhCCC
Confidence 2 4789999999999986654
No 76
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=96.06 E-value=0.27 Score=48.75 Aligned_cols=218 Identities=16% Similarity=0.100 Sum_probs=128.1
Q ss_pred HHHHHHHCCCCEEEEe-cCC------CCCcccccCCHHHHHHHHHhccCC---ceeEEecchhhhhhhhhhhhhccchhh
Q 012949 153 LIRRLVSSGLPVVEAT-SFV------SPKWVPQLADARDVMEAVRDLEGA---RLPVLTPNLKVILQRSILFQQCHASVI 222 (452)
Q Consensus 153 i~~~L~~~Gv~~IEvG-~~~------s~~~~p~~~D~e~v~~~i~~~~~~---~l~~l~~~~~~~i~r~~~~~~~~~~~i 222 (452)
-++.++++||+.|=++ +.. .|.-. .-..++++..++.+... .+++++.. . .+|.. +.++.
T Consensus 37 sA~l~e~aGf~ai~vsG~~~a~s~~G~pD~~--~vt~~em~~~~~~i~r~~~~~~PviaD~-d------~Gyg~-~~~v~ 106 (307)
T 3lye_A 37 SARTAMELGFKSLYMTGAGTTASRLGQPDLA--IAQLHDMRDNADMIANLDPFGPPLIADM-D------TGYGG-PIMVA 106 (307)
T ss_dssp HHHHHHHTTCSCEEECHHHHHHHHHCCCSSS--CSCHHHHHHHHHHHHTSSTTSCCEEEEC-T------TCSSS-HHHHH
T ss_pred HHHHHHHcCCCEEEeccHHHHHHhcCCCCCC--CCCHHHHHHHHHhhhccCCCCCcEEEEC-C------CCCCC-HHHHH
Confidence 3667788999999994 211 22211 13456777777765432 35554422 1 24543 33332
Q ss_pred hhhhhccHHhHHHHHHcCCCEEEEEecCChH---HHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCC-
Q 012949 223 SSNLWVYLQGFEAAIAAGAKEVAIFASASEA---FSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEG- 298 (452)
Q Consensus 223 ~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~---~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~- 298 (452)
+.++...++|+.-|+|-..+.+- |...+-=.+.++..++++.+.+.+++.|....+ +..+ |+-
T Consensus 107 --------~~v~~l~~aGaagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I-~ART----Da~~ 173 (307)
T 3lye_A 107 --------RTVEHYIRSGVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLRSDFVL-IART----DALQ 173 (307)
T ss_dssp --------HHHHHHHHTTCCEEEECCBCCCC--------CBCCHHHHHHHHHHHHHHHHHTTCCCEE-EEEE----CCHH
T ss_pred --------HHHHHHHHcCCeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEE-EEec----hhhh
Confidence 26777888999999999877542 111111247889999998777777666644321 1111 110
Q ss_pred CCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCC-CcCcHHHHHHHHHHcCCCEEe
Q 012949 299 AIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHD-TYGQSLPNILISLQMGISTVD 377 (452)
Q Consensus 299 r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hn-d~GlA~ANaLaAl~aGa~~VD 377 (452)
....+...+=++...++|||.|.+. |.-+++++.++.+.+. .+|. .+-+-... +..+. . -.--++|+++|-
T Consensus 174 ~~gldeAi~Ra~ay~eAGAD~ifi~---~~~~~~~~~~i~~~~~-~~Pv-~~n~~~~g~~p~~t-~--~eL~~lGv~~v~ 245 (307)
T 3lye_A 174 SLGYEECIERLRAARDEGADVGLLE---GFRSKEQAAAAVAALA-PWPL-LLNSVENGHSPLIT-V--EEAKAMGFRIMI 245 (307)
T ss_dssp HHCHHHHHHHHHHHHHTTCSEEEEC---CCSCHHHHHHHHHHHT-TSCB-EEEEETTSSSCCCC-H--HHHHHHTCSEEE
T ss_pred ccCHHHHHHHHHHHHHCCCCEEEec---CCCCHHHHHHHHHHcc-CCce-eEEeecCCCCCCCC-H--HHHHHcCCeEEE
Confidence 1134566667777889999999986 6678888888888774 2342 12222221 22222 2 333456999985
Q ss_pred ecccCCCCCCCCCCCCCcccHHHHHHHHHcCC
Q 012949 378 CSVAGLGGCPYAKGASGNVATEDVVYMLSGLG 409 (452)
Q Consensus 378 ~Sv~GlGecP~a~graGNaalE~vv~~L~~~G 409 (452)
.....+ |+-..++++.+..|+..|
T Consensus 246 ~~~~~~--------raa~~a~~~~~~~l~~~g 269 (307)
T 3lye_A 246 FSFATL--------APAYAAIRETLVRLRDHG 269 (307)
T ss_dssp EETTTH--------HHHHHHHHHHHHHHHHHS
T ss_pred EChHHH--------HHHHHHHHHHHHHHHHhC
Confidence 544433 566788888888887643
No 77
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=96.03 E-value=0.74 Score=43.62 Aligned_cols=189 Identities=14% Similarity=0.086 Sum_probs=116.4
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEecchhhhhhhhhhhhhccchhhh
Q 012949 144 TVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVIS 223 (452)
Q Consensus 144 ~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~ 223 (452)
..+.++..++++...+.|+..+.+- |.|+| ...+.+.++++...+ +.. ++..+.+
T Consensus 13 ~~t~~~i~~l~~~A~~~~~~aVcv~----p~~v~---------~a~~~l~gv~v~tvi-gFP--------~G~~~~~--- 67 (226)
T 1vcv_A 13 YLTVDEAVAGARKAEELGVAAYCVN----PIYAP---------VVRPLLRKVKLCVVA-DFP--------FGALPTA--- 67 (226)
T ss_dssp TCCHHHHHHHHHHHHHHTCSEEEEC----GGGHH---------HHGGGCSSSEEEEEE-STT--------TCCSCHH---
T ss_pred CCCHHHHHHHHHHHHHhCCCEEEEC----HHHHH---------HHHHHhCCCeEEEEe-CCC--------CCCCchH---
Confidence 4589999999999999999999983 33332 111122235554433 110 0011110
Q ss_pred hhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHH
Q 012949 224 SNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPS 303 (452)
Q Consensus 224 ~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e 303 (452)
.....++. ++.|++.|.+.+..... .....++..+.+..+.+.|++.+++|. |. ....+.+
T Consensus 68 ----~k~~E~~~-i~~GAdEID~Vinig~~-----~~g~~~~v~~ei~~v~~a~~~~~lKvI--lE-------t~~Lt~e 128 (226)
T 1vcv_A 68 ----SRIALVSR-LAEVADEIDVVAPIGLV-----KSRRWAEVRRDLISVVGAAGGRVVKVI--TE-------EPYLRDE 128 (226)
T ss_dssp ----HHHHHHHH-HTTTCSEEEEECCHHHH-----HTTCHHHHHHHHHHHHHHTTTSEEEEE--CC-------GGGCCHH
T ss_pred ----HHHHHHHH-HHCCCCEEEEecchhhh-----cCCCHHHHHHHHHHHHHHHcCCCceEE--Ee-------ccCCCHH
Confidence 12246778 99999999999876543 123467778888888888766555553 21 1233578
Q ss_pred HHHHHHHHHHHCCcCEEEEc--CC----------cCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHc
Q 012949 304 KVAYVAKELHDMGCFEISLG--DT----------IGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQM 371 (452)
Q Consensus 304 ~l~~~a~~l~~~Gad~I~L~--DT----------~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~a 371 (452)
.+.+.++.+.++|||-|--. =+ .|.++|+++.-|-+.++. .+. ++.+..---... ...+++=+++
T Consensus 129 ei~~a~~ia~eaGADfVKTSTGf~~~~~~~~~~~~~gAt~~dv~lm~~~i~~-~g~-~v~vKaaGGirt-~~~al~~i~a 205 (226)
T 1vcv_A 129 ERYTLYDIIAEAGAHFIKSSTGFAEEAYAARQGNPVHSTPERAAAIARYIKE-KGY-RLGVKMAGGIRT-REQAKAIVDA 205 (226)
T ss_dssp HHHHHHHHHHHHTCSEEECCCSCCCHHHHHHTTCCSSCCHHHHHHHHHHHHH-HTC-CCEEEEESSCCS-HHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEeCCCCCccccccccCCCCCCCHHHHHHHHHHHHH-hCC-CceEEEeCCCCC-HHHHHHHHHH
Confidence 89999999999999988765 22 366788888766555443 332 344443322221 4455555555
Q ss_pred ---CCC----EEeec
Q 012949 372 ---GIS----TVDCS 379 (452)
Q Consensus 372 ---Ga~----~VD~S 379 (452)
|++ ++-+|
T Consensus 206 ~~~Ga~~~~fRiGtS 220 (226)
T 1vcv_A 206 IGWGEDPARVRLGTS 220 (226)
T ss_dssp HCSCSCTTTEEEEES
T ss_pred HHCCCCcCCceEecC
Confidence 999 88766
No 78
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=95.95 E-value=0.037 Score=51.64 Aligned_cols=171 Identities=16% Similarity=0.108 Sum_probs=93.8
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhc-cCCceeEEecchhhhhhhhhhhhhccchhh
Q 012949 144 TVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDL-EGARLPVLTPNLKVILQRSILFQQCHASVI 222 (452)
Q Consensus 144 ~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~-~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i 222 (452)
..+.++-+++++.+ +.|++.+|+|++-+ +....++++.+++. ++..+...+ + ++ ..+
T Consensus 15 ~~~~~~~~~~~~~~-~~~vd~ie~g~~~~------~~~G~~~i~~lr~~~~~~~i~ld~---~-----l~---d~p---- 72 (218)
T 3jr2_A 15 QTNLTDAVAVASNV-ASYVDVIEVGTILA------FAEGMKAVSTLRHNHPNHILVCDM---K-----TT---DGG---- 72 (218)
T ss_dssp CSSHHHHHHHHHHH-GGGCSEEEECHHHH------HHHTTHHHHHHHHHCTTSEEEEEE---E-----EC---SCH----
T ss_pred CCCHHHHHHHHHHh-cCCceEEEeCcHHH------HhcCHHHHHHHHHhCCCCcEEEEE---e-----ec---ccH----
Confidence 45788889999997 56999999996321 11112456667654 444332211 1 00 000
Q ss_pred hhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCH
Q 012949 223 SSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPP 302 (452)
Q Consensus 223 ~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~ 302 (452)
...++.++++|++.|.+.....+ +.+.++++.+|+.|.++.+-+ .+. .++
T Consensus 73 -------~~~~~~~~~aGad~i~vh~~~~~---------------~~~~~~~~~~~~~g~~~~~d~---l~~-----~T~ 122 (218)
T 3jr2_A 73 -------AILSRMAFEAGADWITVSAAAHI---------------ATIAACKKVADELNGEIQIEI---YGN-----WTM 122 (218)
T ss_dssp -------HHHHHHHHHHTCSEEEEETTSCH---------------HHHHHHHHHHHHHTCEEEEEC---CSS-----CCH
T ss_pred -------HHHHHHHHhcCCCEEEEecCCCH---------------HHHHHHHHHHHHhCCccceee---eec-----CCH
Confidence 12568889999999988764332 234566778888898754211 211 234
Q ss_pred HHHHHHHHHHHHCCcCEEEEc-----CCcCC-CcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEE
Q 012949 303 SKVAYVAKELHDMGCFEISLG-----DTIGV-GTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTV 376 (452)
Q Consensus 303 e~l~~~a~~l~~~Gad~I~L~-----DT~G~-~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~V 376 (452)
+.+.+ +.+.|+|.+.+. ...|. ..|..+ +.++.++. +..++.+ +.|.-..|+-.++++||+.|
T Consensus 123 ~~~~~----~~~~g~d~v~~~~~~~~~~~g~~~~~~~l-~~i~~~~~--~~~pi~v----~GGI~~~~~~~~~~aGAd~v 191 (218)
T 3jr2_A 123 QDAKA----WVDLGITQAIYHRSRDAELAGIGWTTDDL-DKMRQLSA--LGIELSI----TGGIVPEDIYLFEGIKTKTF 191 (218)
T ss_dssp HHHHH----HHHTTCCEEEEECCHHHHHHTCCSCHHHH-HHHHHHHH--TTCEEEE----ESSCCGGGGGGGTTSCEEEE
T ss_pred HHHHH----HHHcCccceeeeeccccccCCCcCCHHHH-HHHHHHhC--CCCCEEE----ECCCCHHHHHHHHHcCCCEE
Confidence 43333 345599976551 11122 233333 33444443 2334544 33444456667899998865
Q ss_pred e
Q 012949 377 D 377 (452)
Q Consensus 377 D 377 (452)
=
T Consensus 192 v 192 (218)
T 3jr2_A 192 I 192 (218)
T ss_dssp E
T ss_pred E
Confidence 3
No 79
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=95.91 E-value=1.7 Score=43.90 Aligned_cols=232 Identities=19% Similarity=0.115 Sum_probs=136.0
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEe-cchhhhhhhhhhhhhccchhh
Q 012949 144 TVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLT-PNLKVILQRSILFQQCHASVI 222 (452)
Q Consensus 144 ~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~-~~~~~~i~r~~~~~~~~~~~i 222 (452)
+.+.+.-++=++.|.++|.+.|.++.+. .. +.+.+..+++..++.+.+=+ -+.
T Consensus 42 T~D~~atv~Qi~~l~~aG~diVRvavp~-------~~-~a~al~~I~~~~~vPlvaDiHf~~------------------ 95 (366)
T 3noy_A 42 THDVEATLNQIKRLYEAGCEIVRVAVPH-------KE-DVEALEEIVKKSPMPVIADIHFAP------------------ 95 (366)
T ss_dssp TTCHHHHHHHHHHHHHTTCCEEEEECCS-------HH-HHHHHHHHHHHCSSCEEEECCSCH------------------
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCCCC-------hH-HHHHHHHHHhcCCCCEEEeCCCCH------------------
Confidence 3678888888999999999999998642 22 23344445443333332211 111
Q ss_pred hhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCC-----
Q 012949 223 SSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVE----- 297 (452)
Q Consensus 223 ~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~----- 297 (452)
+-+..|+++|++.+||-- -|++. -+++.++++.||++|+.++.-+- +|+-+.
T Consensus 96 --------~lal~a~e~G~dklRINP--------GNig~-----~~~~~~vv~~ak~~~~piRIGvN--~GSL~~~ll~~ 152 (366)
T 3noy_A 96 --------SYAFLSMEKGVHGIRINP--------GNIGK-----EEIVREIVEEAKRRGVAVRIGVN--SGSLEKDLLEK 152 (366)
T ss_dssp --------HHHHHHHHTTCSEEEECH--------HHHSC-----HHHHHHHHHHHHHHTCEEEEEEE--GGGCCHHHHHH
T ss_pred --------HHHHHHHHhCCCeEEECC--------cccCc-----hhHHHHHHHHHHHcCCCEEEecC--CcCCCHHHHHh
Confidence 144568899999998742 24443 24677899999999999995443 343221
Q ss_pred -CCCCHHHH----HHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCc-CcH------HHHH
Q 012949 298 -GAIPPSKV----AYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTY-GQS------LPNI 365 (452)
Q Consensus 298 -~r~d~e~l----~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~-GlA------~ANa 365 (452)
+..+++-+ .+.++.+.+.|.+.|.+ +.-...+..+.+-.+.|.++.+ -|| |+--|- |.. .+-.
T Consensus 153 yg~~~~eamVeSAl~~~~~~e~~gf~~ivi--S~K~S~v~~~i~ayr~la~~~d-yPL--HlGvTEAG~~~~G~ikSsig 227 (366)
T 3noy_A 153 YGYPSAEALAESALRWSEKFEKWGFTNYKV--SIKGSDVLQNVRANLIFAERTD-VPL--HIGITEAGMGTKGIIKSSVG 227 (366)
T ss_dssp HSSCCHHHHHHHHHHHHHHHHHTTCCCEEE--EEECSSHHHHHHHHHHHHHHCC-CCE--EECCSSCCSHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHhCCCCeEEE--eeecCChHHHHHHHHHHHhccC-CCE--EEccCCCCCCcceeeehHHH
Confidence 11244443 34667788889864443 2222244444444555555532 344 555442 554 3344
Q ss_pred HHHHH-cCC-CEEeecccCCCCCCCCCCCCCcccHHHHHHHH---HcCCC--------------CCCCChhhHHHHHHHH
Q 012949 366 LISLQ-MGI-STVDCSVAGLGGCPYAKGASGNVATEDVVYML---SGLGV--------------ETNVDLRKLMLAGDFI 426 (452)
Q Consensus 366 LaAl~-aGa-~~VD~Sv~GlGecP~a~graGNaalE~vv~~L---~~~Gi--------------~t~iDl~~L~~la~~v 426 (452)
+-+|. .|. |.|-+|+.+ .|.||+-.+. +.+|+ .+.+|+ .++++.+
T Consensus 228 iG~LL~dGIGDTIRVSLt~-------------~p~~Ev~va~~ILqslglR~~g~~~ISCPtCGRt~~dl---~~~~~~i 291 (366)
T 3noy_A 228 IGILLYMGIGDTVRVSLTD-------------DPVVEVETAYEILKSLGLRRRGVEIVACPTCGRIEVDL---PKVVKEV 291 (366)
T ss_dssp HHHHHHTTCCSEECCCCSS-------------CHHHHHHHHHHHHHHTTSCCSSCEEEECCCCTTCCSCH---HHHHHHH
T ss_pred HHHHHHhcccceEEEeCCC-------------CcHHHHHHHHHHHHhcCCCcCCCEEEECCCCCCccccH---HHHHHHH
Confidence 55555 475 788888772 2677775443 33332 245666 5556677
Q ss_pred HHHh-CCCCCCCcccccchh
Q 012949 427 NKHL-GRPSGSKTAIALNRI 445 (452)
Q Consensus 427 ~~~~-g~~~p~~~pi~G~~v 445 (452)
++.+ +++.|-+.++.|.-|
T Consensus 292 e~~l~~~~~~lkVAVMGCvV 311 (366)
T 3noy_A 292 QEKLSGVKTPLKVAVMGCVV 311 (366)
T ss_dssp HHHTTTCCSCCEEEEESSSH
T ss_pred HHHHhCCCCCCEEEEEcccc
Confidence 7766 566677777777543
No 80
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=95.91 E-value=0.22 Score=47.12 Aligned_cols=169 Identities=15% Similarity=0.090 Sum_probs=98.9
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEecchhhhhhhhhhhhhccchhhhh
Q 012949 145 VPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISS 224 (452)
Q Consensus 145 ~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~ 224 (452)
-+.+...++++...+.|...|++++ . +.++.+++..+. +++.-+++ .|..+. -.|.
T Consensus 33 ~~~~~~~~~A~a~~~~Ga~~i~~~~------------~-~~i~~ir~~v~~--Pvig~~k~-------~~~~~~-~~I~- 88 (229)
T 3q58_A 33 DKPEIVAAMAQAAASAGAVAVRIEG------------I-ENLRTVRPHLSV--PIIGIIKR-------DLTGSP-VRIT- 88 (229)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEES------------H-HHHHHHGGGCCS--CEEEECBC-------CCSSCC-CCBS-
T ss_pred CCcchHHHHHHHHHHCCCcEEEECC------------H-HHHHHHHHhcCC--CEEEEEee-------cCCCCc-eEeC-
Confidence 4678899999999999999999974 1 345666654443 33211111 000000 0000
Q ss_pred hhhccHHhHHHHHHcCCCEEEEEecC--ChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCH
Q 012949 225 NLWVYLQGFEAAIAAGAKEVAIFASA--SEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPP 302 (452)
Q Consensus 225 ~~~~~~~~ie~a~~~Gi~~V~i~~s~--Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~ 302 (452)
-+.++++.++++|+|.|.+-... ++ +.+.++++++|++|+.+.+.+ .+.
T Consensus 89 ---~~~~~i~~~~~aGad~I~l~~~~~~~p---------------~~l~~~i~~~~~~g~~v~~~v-----------~t~ 139 (229)
T 3q58_A 89 ---PYLQDVDALAQAGADIIAFDASFRSRP---------------VDIDSLLTRIRLHGLLAMADC-----------STV 139 (229)
T ss_dssp ---CSHHHHHHHHHHTCSEEEEECCSSCCS---------------SCHHHHHHHHHHTTCEEEEEC-----------SSH
T ss_pred ---ccHHHHHHHHHcCCCEEEECccccCCh---------------HHHHHHHHHHHHCCCEEEEec-----------CCH
Confidence 12347888999999988665432 12 234577788888898775321 123
Q ss_pred HHHHHHHHHHHHCCcCEEEEc--C-CcC--CCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcH-HHHHHHHHHcCCCEE
Q 012949 303 SKVAYVAKELHDMGCFEISLG--D-TIG--VGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQS-LPNILISLQMGISTV 376 (452)
Q Consensus 303 e~l~~~a~~l~~~Gad~I~L~--D-T~G--~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA-~ANaLaAl~aGa~~V 376 (452)
+.++.+.++|+|.|.+. + |.+ ...| -.++++.+++. .+++-.= -|.. ..+...++++||+.|
T Consensus 140 ----eea~~a~~~Gad~Ig~~~~g~t~~~~~~~~--~~~li~~l~~~--~ipvIA~----GGI~t~~d~~~~~~~GadgV 207 (229)
T 3q58_A 140 ----NEGISCHQKGIEFIGTTLSGYTGPITPVEP--DLAMVTQLSHA--GCRVIAE----GRYNTPALAANAIEHGAWAV 207 (229)
T ss_dssp ----HHHHHHHHTTCSEEECTTTTSSSSCCCSSC--CHHHHHHHHTT--TCCEEEE----SSCCSHHHHHHHHHTTCSEE
T ss_pred ----HHHHHHHhCCCCEEEecCccCCCCCcCCCC--CHHHHHHHHHc--CCCEEEE----CCCCCHHHHHHHHHcCCCEE
Confidence 34566788999999531 1 111 1122 13566666664 3344332 3443 578888889999866
Q ss_pred ee
Q 012949 377 DC 378 (452)
Q Consensus 377 D~ 378 (452)
=+
T Consensus 208 ~V 209 (229)
T 3q58_A 208 TV 209 (229)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 81
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=95.89 E-value=1.4 Score=42.81 Aligned_cols=235 Identities=12% Similarity=0.048 Sum_probs=141.8
Q ss_pred CccEEEeCCccccCCCCCCC---CCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHh---cc-CCce
Q 012949 125 RFVKIVEVGPRDGLQNEKNT---VPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRD---LE-GARL 197 (452)
Q Consensus 125 ~~V~I~D~TLRDG~Q~~~~~---~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~---~~-~~~l 197 (452)
+.|+|-++++-+|.-..-.. -+.++.++.++.+...|.|.||+-...... ..+.+++.+.++. .. +..+
T Consensus 26 ~~v~v~~~~~g~g~p~i~v~l~~~~~~e~~~~~~~~~~~gaD~VElRvD~l~~----~~~~~~v~~~l~~lr~~~~~~Pi 101 (276)
T 3o1n_A 26 KTVTVRDLVVGEGAPKIIVSLMGKTITDVKSEALAYREADFDILEWRVDHFAN----VTTAESVLEAAGAIREIITDKPL 101 (276)
T ss_dssp CCEEETTEEETSSSCEEEEEECCSSHHHHHHHHHHHTTSCCSEEEEEGGGCTT----TTCHHHHHHHHHHHHHHCCSSCE
T ss_pred eEEEECCEEeCCCCcEEEEEeCCCCHHHHHHHHHHHhhCCCCEEEEEeccccc----cCcHHHHHHHHHHHHHhcCCCCE
Confidence 45888888887775433222 245666677777777999999997543221 1233445554443 22 3322
Q ss_pred eEEecchhhhhhhhhh-hhhccchhhhhhhhccHHhHHHHHHcC-CCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHH
Q 012949 198 PVLTPNLKVILQRSIL-FQQCHASVISSNLWVYLQGFEAAIAAG-AKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAH 275 (452)
Q Consensus 198 ~~l~~~~~~~i~r~~~-~~~~~~~~i~~~~~~~~~~ie~a~~~G-i~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~ 275 (452)
-+-++...+ =| |. ..++ .+.+-++.+++.| ++.|.|-....+ +.+.++++
T Consensus 102 I~T~Rt~~e-----GG~~~-~~~~-------~~~~ll~~~l~~g~~dyIDvEl~~~~---------------~~~~~l~~ 153 (276)
T 3o1n_A 102 LFTFRSAKE-----GGEQA-LTTG-------QYIDLNRAAVDSGLVDMIDLELFTGD---------------DEVKATVG 153 (276)
T ss_dssp EEECCBGGG-----TCSBC-CCHH-------HHHHHHHHHHHHTCCSEEEEEGGGCH---------------HHHHHHHH
T ss_pred EEEEEEhhh-----CCCCC-CCHH-------HHHHHHHHHHhcCCCCEEEEECcCCH---------------HHHHHHHH
Confidence 221222110 00 10 0100 1334667888889 899999765433 34456778
Q ss_pred HHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHH---hCCCccEEE
Q 012949 276 AAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMA---VVPVEKLAV 352 (452)
Q Consensus 276 ~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~---~~p~~~l~v 352 (452)
.|++.|.+|.+..=. | ....+.+.+.+..+.+.+.|||.+.|+=+ .-++.++.+++....+ .++..|+-.
T Consensus 154 ~a~~~~~kvI~S~Hd-f----~~tP~~~el~~~~~~~~~~GaDIvKia~~--a~s~~Dvl~Ll~~~~~~~~~~~~~PlIa 226 (276)
T 3o1n_A 154 YAHQHNVAVIMSNHD-F----HKTPAAEEIVQRLRKMQELGADIPKIAVM--PQTKADVLTLLTATVEMQERYADRPIIT 226 (276)
T ss_dssp HHHHTTCEEEEEEEE-S----SCCCCHHHHHHHHHHHHHTTCSEEEEEEC--CSSHHHHHHHHHHHHHHHHHTCCSCCEE
T ss_pred HHHhCCCEEEEEeec-C----CCCcCHHHHHHHHHHHHHcCCCEEEEEec--CCChHHHHHHHHHHHHHHhcCCCCCEEE
Confidence 888999888632221 2 22224578888999999999999999755 3567888888776543 234444443
Q ss_pred EeCCCcCcHHHHHHHHHHcCCCEEeecccCCCCCCCCCCCCCcccHHHHHHHHHc
Q 012949 353 HLHDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSG 407 (452)
Q Consensus 353 H~Hnd~GlA~ANaLaAl~aGa~~VD~Sv~GlGecP~a~graGNaalE~vv~~L~~ 407 (452)
- +.-.++.-.-+.+-..|-...-+++ |+ |-| .|+.+++++-..|+.
T Consensus 227 ~--~MG~~G~~SRi~~~~~GS~vTf~~l---~~-~sA---PGQl~~~~l~~~l~~ 272 (276)
T 3o1n_A 227 M--SMSKTGVISRLAGEVFGSAATFGAV---KK-ASA---PGAISVADLRTVLTI 272 (276)
T ss_dssp E--ECSGGGTHHHHCHHHHTCCEEECBS---SC-CSS---TTCCBHHHHHHHHHH
T ss_pred E--ECCCchhhHHHHHHHhCCceEecCC---CC-CCC---CCCCCHHHHHHHHHH
Confidence 3 2333444556666678888888887 33 334 559999999887764
No 82
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=95.87 E-value=0.17 Score=47.88 Aligned_cols=153 Identities=19% Similarity=0.130 Sum_probs=98.0
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHH-hccCCceeEEecchhhhhhhhhhhhhccchhhhh
Q 012949 146 PTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVR-DLEGARLPVLTPNLKVILQRSILFQQCHASVISS 224 (452)
Q Consensus 146 ~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~-~~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~ 224 (452)
+.++-+++++.|.+.|++.||++.-. + +..+.++.++ ..++..+.+-+.-
T Consensus 36 ~~~~~~~~~~al~~gGv~~iel~~k~-~-------~~~~~i~~l~~~~~~~~igagtvl--------------------- 86 (225)
T 1mxs_A 36 REEDILPLADALAAGGIRTLEVTLRS-Q-------HGLKAIQVLREQRPELCVGAGTVL--------------------- 86 (225)
T ss_dssp CGGGHHHHHHHHHHTTCCEEEEESSS-T-------HHHHHHHHHHHHCTTSEEEEECCC---------------------
T ss_pred CHHHHHHHHHHHHHCCCCEEEEecCC-c-------cHHHHHHHHHHhCcccEEeeCeEe---------------------
Confidence 55667899999999999999998532 1 2234445443 3444333221110
Q ss_pred hhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHH
Q 012949 225 NLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSK 304 (452)
Q Consensus 225 ~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~ 304 (452)
..+.++.|+++|++.|+.. -.+ .++++.++++|..... | -.+++.
T Consensus 87 ----~~d~~~~A~~aGAd~v~~p--~~d------------------~~v~~~~~~~g~~~i~------G-----~~t~~e 131 (225)
T 1mxs_A 87 ----DRSMFAAVEAAGAQFVVTP--GIT------------------EDILEAGVDSEIPLLP------G-----ISTPSE 131 (225)
T ss_dssp ----SHHHHHHHHHHTCSSEECS--SCC------------------HHHHHHHHHCSSCEEC------E-----ECSHHH
T ss_pred ----eHHHHHHHHHCCCCEEEeC--CCC------------------HHHHHHHHHhCCCEEE------e-----eCCHHH
Confidence 1248899999999999743 222 2567888999987641 1 123444
Q ss_pred HHHHHHHHHHCCcCEEEEcCCcCCCcHHH-H--HHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHH-cCCCEEe
Q 012949 305 VAYVAKELHDMGCFEISLGDTIGVGTPGT-V--VPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQ-MGISTVD 377 (452)
Q Consensus 305 l~~~a~~l~~~Gad~I~L~DT~G~~~P~~-v--~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~-aGa~~VD 377 (452)
+ ..+.++|+|.|.+ .|.. + .+.++.++..+|.+++-. .=|.-..|.-.-+. +|++.|=
T Consensus 132 ~----~~A~~~Gad~vk~-------FPa~~~~G~~~lk~i~~~~~~ipvva----iGGI~~~N~~~~l~~~Ga~~v~ 193 (225)
T 1mxs_A 132 I----MMGYALGYRRFKL-------FPAEISGGVAAIKAFGGPFGDIRFCP----TGGVNPANVRNYMALPNVMCVG 193 (225)
T ss_dssp H----HHHHTTTCCEEEE-------TTHHHHTHHHHHHHHHTTTTTCEEEE----BSSCCTTTHHHHHHSTTBCCEE
T ss_pred H----HHHHHCCCCEEEE-------ccCccccCHHHHHHHHhhCCCCeEEE----ECCCCHHHHHHHHhccCCEEEE
Confidence 3 4456889999888 4432 3 577888888887666533 23555568888888 6888664
No 83
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=95.85 E-value=0.22 Score=49.36 Aligned_cols=219 Identities=14% Similarity=0.082 Sum_probs=128.0
Q ss_pred HHHHHHHCCCCEEEEe-cCC--CCCcccc--cCCHHHHHHHHHhccCC--ceeEEecchhhhhhhhhhhhhccchhhhhh
Q 012949 153 LIRRLVSSGLPVVEAT-SFV--SPKWVPQ--LADARDVMEAVRDLEGA--RLPVLTPNLKVILQRSILFQQCHASVISSN 225 (452)
Q Consensus 153 i~~~L~~~Gv~~IEvG-~~~--s~~~~p~--~~D~e~v~~~i~~~~~~--~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~ 225 (452)
-++.+.++||+.|=++ +.. +....|- .-..++++..++.+... .+++++.. . .+|.. +.++.
T Consensus 30 sA~l~e~aGf~ai~vsG~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~~PviaD~-d------~Gyg~-~~~v~--- 98 (302)
T 3fa4_A 30 SARVALSAGFDALYMTGAGTAASVHGQADLGICTLNDMRANAEMISNISPSTPVIADA-D------TGYGG-PIMVA--- 98 (302)
T ss_dssp HHHHHHTTTCSCEEECHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHTTSTTSCEEEEC-T------TTTSS-HHHHH---
T ss_pred HHHHHHHcCCCEEEeCcHHHHHHHcCCCCCCcCCHHHHHHHHHHHHhhccCCCEEEEC-C------CCCCC-HHHHH---
Confidence 3667888999999984 221 1011121 13456777777765432 44544422 1 34553 33332
Q ss_pred hhccHHhHHHHHHcCCCEEEEEecCChH---HHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCC-CCC
Q 012949 226 LWVYLQGFEAAIAAGAKEVAIFASASEA---FSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEG-AIP 301 (452)
Q Consensus 226 ~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~---~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~-r~d 301 (452)
+.++...++|+.-|+|-..+.+- |...+-=.+.++..++++.+++.+++.|.++.. +..+ |+- ...
T Consensus 99 -----~tv~~l~~aGaagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I-~ART----Da~~~~g 168 (302)
T 3fa4_A 99 -----RTTEQYSRSGVAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQARQRIGSDIVV-IART----DSLQTHG 168 (302)
T ss_dssp -----HHHHHHHHTTCCEEEECSBCCC-------CCCBCCHHHHHHHHHHHHHHHHHHTCCCEE-EEEE----CCHHHHC
T ss_pred -----HHHHHHHHcCCcEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCEEE-EEEe----cccccCC
Confidence 26777888999999999877542 111111247899999998777776666654321 1111 110 113
Q ss_pred HHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEE--EeCCCcCcHHHHHHHHHHcCCCEEeec
Q 012949 302 PSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAV--HLHDTYGQSLPNILISLQMGISTVDCS 379 (452)
Q Consensus 302 ~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~v--H~Hnd~GlA~ANaLaAl~aGa~~VD~S 379 (452)
.+...+=++...++|||.|.+. |.-+++++.++.+.+. ..|+-+ -.......-... .--++|+++|-..
T Consensus 169 ldeAi~Ra~ay~eAGAD~ifi~---g~~~~~ei~~~~~~~~----~~Pl~~n~~~~g~~p~~~~~--eL~~lGv~~v~~~ 239 (302)
T 3fa4_A 169 YEESVARLRAARDAGADVGFLE---GITSREMARQVIQDLA----GWPLLLNMVEHGATPSISAA--EAKEMGFRIIIFP 239 (302)
T ss_dssp HHHHHHHHHHHHTTTCSEEEET---TCCCHHHHHHHHHHTT----TSCEEEECCTTSSSCCCCHH--HHHHHTCSEEEET
T ss_pred HHHHHHHHHHHHHcCCCEEeec---CCCCHHHHHHHHHHhc----CCceeEEEecCCCCCCCCHH--HHHHcCCCEEEEc
Confidence 4566667777889999999885 4567888877766653 223333 222222211222 3335699988776
Q ss_pred ccCCCCCCCCCCCCCcccHHHHHHHHHcCC
Q 012949 380 VAGLGGCPYAKGASGNVATEDVVYMLSGLG 409 (452)
Q Consensus 380 v~GlGecP~a~graGNaalE~vv~~L~~~G 409 (452)
...+ |+-..++++.+..|+..|
T Consensus 240 ~~~~--------raa~~A~~~~~~~i~~~g 261 (302)
T 3fa4_A 240 FAAL--------GPAVAAMREAMEKLKRDG 261 (302)
T ss_dssp TTTH--------HHHHHHHHHHHHHHHHHS
T ss_pred hHHH--------HHHHHHHHHHHHHHHHcC
Confidence 6655 566788888888887644
No 84
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=95.80 E-value=0.21 Score=50.36 Aligned_cols=183 Identities=13% Similarity=0.103 Sum_probs=114.7
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEecCC-----CCCc---cc-----cc-------CCHHHHHHHHHh-ccCCceeEEecc
Q 012949 145 VPTGVKVELIRRLVSSGLPVVEATSFV-----SPKW---VP-----QL-------ADARDVMEAVRD-LEGARLPVLTPN 203 (452)
Q Consensus 145 ~~~~~k~~i~~~L~~~Gv~~IEvG~~~-----s~~~---~p-----~~-------~D~e~v~~~i~~-~~~~~l~~l~~~ 203 (452)
=+.+.-.++++...++|.+.+-.+.+- +|.. .+ +. .-.++-+..+++ .....+..++-.
T Consensus 32 gs~e~a~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e~~~~L~~~~~~~Gi~~~st~ 111 (349)
T 2wqp_A 32 GSLKTAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVESKGMIFISTL 111 (349)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCHHHHHHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhCCCHHHHHHHHHHHHHhCCeEEEee
Confidence 388999999999999999999998542 3321 11 00 001222233322 112233333311
Q ss_pred hhhhhhhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCc
Q 012949 204 LKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIP 283 (452)
Q Consensus 204 ~~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~ 283 (452)
. ..++++.+.+.+++.+.|... +. .+ ..+++++-+.|.+
T Consensus 112 ~------------------------d~~svd~l~~~~v~~~KI~S~--~~--------------~n-~~LL~~va~~gkP 150 (349)
T 2wqp_A 112 F------------------------SRAAALRLQRMDIPAYKIGSG--EC--------------NN-YPLIKLVASFGKP 150 (349)
T ss_dssp C------------------------SHHHHHHHHHHTCSCEEECGG--GT--------------TC-HHHHHHHHTTCSC
T ss_pred C------------------------CHHHHHHHHhcCCCEEEECcc--cc--------------cC-HHHHHHHHhcCCe
Confidence 1 124777777888888887642 11 11 1445666678999
Q ss_pred EEEEEEeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHH--HHHHHHhCCCccEEEEeCCCcCcH
Q 012949 284 VRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPM--LEAVMAVVPVEKLAVHLHDTYGQS 361 (452)
Q Consensus 284 V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~l--i~~l~~~~p~~~l~vH~Hnd~GlA 361 (452)
|- |+. +..+.+.+...++.+.+.|.+.+-+-=+.++=+|....+| |..+++.+|..+|++=-|- .|
T Consensus 151 vi--Lst-------Gmat~~Ei~~Ave~i~~~G~~iiLlhc~s~Yp~~~~~~nL~ai~~lk~~f~~lpVg~sdHt-~G-- 218 (349)
T 2wqp_A 151 II--LST-------GMNSIESIKKSVEIIREAGVPYALLHCTNIYPTPYEDVRLGGMNDLSEAFPDAIIGLSDHT-LD-- 218 (349)
T ss_dssp EE--EEC-------TTCCHHHHHHHHHHHHHHTCCEEEEECCCCSSCCGGGCCTHHHHHHHHHCTTSEEEEECCS-SS--
T ss_pred EE--EEC-------CCCCHHHHHHHHHHHHHcCCCEEEEeccCCCCCChhhcCHHHHHHHHHHCCCCCEEeCCCC-Cc--
Confidence 86 442 4568899999999999889854433235555555555444 7888999966689885554 34
Q ss_pred HHHHHHHHHcCCCEEeecc
Q 012949 362 LPNILISLQMGISTVDCSV 380 (452)
Q Consensus 362 ~ANaLaAl~aGa~~VD~Sv 380 (452)
.+-+++|+.+||++|+.=+
T Consensus 219 ~~~~~AAvAlGA~iIEkH~ 237 (349)
T 2wqp_A 219 NYACLGAVALGGSILERHF 237 (349)
T ss_dssp SHHHHHHHHHTCCEEEEEB
T ss_pred HHHHHHHHHhCCCEEEeCC
Confidence 7888999999999886543
No 85
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=95.79 E-value=0.1 Score=49.70 Aligned_cols=211 Identities=11% Similarity=0.072 Sum_probs=104.8
Q ss_pred HHHHHHHHHHCCCCEEEEecCCCCCcccccC--CHHHHHHHHHhccCCceeE-Eecchhhhhhhhhhhhhccchhhhhhh
Q 012949 150 KVELIRRLVSSGLPVVEATSFVSPKWVPQLA--DARDVMEAVRDLEGARLPV-LTPNLKVILQRSILFQQCHASVISSNL 226 (452)
Q Consensus 150 k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~--D~e~v~~~i~~~~~~~l~~-l~~~~~~~i~r~~~~~~~~~~~i~~~~ 226 (452)
-.+.++.+.++|++.||+.... +|.+. +.+++.+.+++ .++++.+ ..+... ..+.....+.-+...
T Consensus 19 ~~~~l~~~~~~G~~~vEl~~~~----~~~~~~~~~~~~~~~l~~-~gl~i~~~~~~~~~------~~l~~~d~~~r~~~~ 87 (294)
T 3vni_A 19 YKYYIEKVAKLGFDILEIAASP----LPFYSDIQINELKACAHG-NGITLTVGHGPSAE------QNLSSPDPDIRKNAK 87 (294)
T ss_dssp HHHHHHHHHHHTCSEEEEESTT----GGGCCHHHHHHHHHHHHH-TTCEEEEEECCCGG------GCTTCSCHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEecCcc----cCCcCHHHHHHHHHHHHH-cCCeEEEeecCCCC------cCCCCCCHHHHHHHH
Confidence 3566777888999999998532 12221 22333333332 4566655 223211 001100000000000
Q ss_pred hccHHhHHHHHHcCCCEEEEEe-cCChHHHhhhcCCC----HHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCC
Q 012949 227 WVYLQGFEAAIAAGAKEVAIFA-SASEAFSKSNINCS----IEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIP 301 (452)
Q Consensus 227 ~~~~~~ie~a~~~Gi~~V~i~~-s~Sd~~~~~~~~~s----~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d 301 (452)
....+.++.|.+.|++.|.+.. +..... ..-+.+ .+...+.+.++.++|++.|+++. +...-..+...-.+
T Consensus 88 ~~~~~~i~~a~~lG~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~--lEn~~~~~~~~~~~ 163 (294)
T 3vni_A 88 AFYTDLLKRLYKLDVHLIGGALYSYWPID--YTKTIDKKGDWERSVESVREVAKVAEACGVDFC--LEVLNRFENYLINT 163 (294)
T ss_dssp HHHHHHHHHHHHHTCCEEEESTTSCSSCC--TTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEE--EECCCTTTCSSCCS
T ss_pred HHHHHHHHHHHHhCCCeeeccccCCCCCc--CCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEE--EEecCcccCcccCC
Confidence 0123467888889999998532 211000 000123 34555666677888999998754 33211001111236
Q ss_pred HHHHHHHHHHHHHCCcCEEE-EcCCcCCCcH-HHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEeec
Q 012949 302 PSKVAYVAKELHDMGCFEIS-LGDTIGVGTP-GTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCS 379 (452)
Q Consensus 302 ~e~l~~~a~~l~~~Gad~I~-L~DT~G~~~P-~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~S 379 (452)
++.+.++++.+ +.+.+. .-|+.=...- ....+.++.+. + --..+|.+|..+ .
T Consensus 164 ~~~~~~l~~~v---~~~~vg~~~D~~h~~~~g~d~~~~l~~~~---~-~i~~vHl~D~~r-------------------~ 217 (294)
T 3vni_A 164 AQEGVDFVKQV---DHNNVKVMLDTFHMNIEEDSIGGAIRTAG---S-YLGHLHTGECNR-------------------K 217 (294)
T ss_dssp HHHHHHHHHHH---CCTTEEEEEEHHHHHHHCSCHHHHHHHHG---G-GEEEEEECCTTS-------------------C
T ss_pred HHHHHHHHHHc---CCCCEEEEEEhhhhHHcCCCHHHHHHHhh---h-hEeEEEeCCCCC-------------------C
Confidence 67777777655 322222 2265221111 12233333332 2 236799999521 0
Q ss_pred ccCCCCCCCCCCCCCcccHHHHHHHHHcCCCC
Q 012949 380 VAGLGGCPYAKGASGNVATEDVVYMLSGLGVE 411 (452)
Q Consensus 380 v~GlGecP~a~graGNaalE~vv~~L~~~Gi~ 411 (452)
.| +.|..+.+.++..|+..|++
T Consensus 218 ---------~p-G~G~id~~~~~~~L~~~gy~ 239 (294)
T 3vni_A 218 ---------VP-GRGRIPWVEIGEALADIGYN 239 (294)
T ss_dssp ---------CT-TSSSCCHHHHHHHHHHTTCC
T ss_pred ---------CC-CCCCcCHHHHHHHHHHhCCC
Confidence 12 26889999999999987665
No 86
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=95.78 E-value=0.31 Score=46.16 Aligned_cols=169 Identities=14% Similarity=0.093 Sum_probs=98.5
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEecchhhhhhhhhhhhhccchhhhh
Q 012949 145 VPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISS 224 (452)
Q Consensus 145 ~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~ 224 (452)
.+.+...++++...+.|...|++++ .+.++.+++..+.. ++.-+++ .|..+. -.|.
T Consensus 33 ~~~~~~~~~A~a~~~~Ga~~i~~~~-------------~~~i~~ir~~v~~P--vig~~k~-------d~~~~~-~~I~- 88 (232)
T 3igs_A 33 DKPEIVAAMALAAEQAGAVAVRIEG-------------IDNLRMTRSLVSVP--IIGIIKR-------DLDESP-VRIT- 88 (232)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEES-------------HHHHHHHHTTCCSC--EEEECBC-------CCSSCC-CCBS-
T ss_pred CCcchHHHHHHHHHHCCCeEEEECC-------------HHHHHHHHHhcCCC--EEEEEee-------cCCCcc-eEeC-
Confidence 4578899999999999999999964 13456666544433 2211111 000000 0000
Q ss_pred hhhccHHhHHHHHHcCCCEEEEEecC--ChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCH
Q 012949 225 NLWVYLQGFEAAIAAGAKEVAIFASA--SEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPP 302 (452)
Q Consensus 225 ~~~~~~~~ie~a~~~Gi~~V~i~~s~--Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~ 302 (452)
-+.++++.++++|+|.|.+-... ++ +.+.+++++++++|+.+.+.+ .+.
T Consensus 89 ---~~~~~i~~~~~~Gad~V~l~~~~~~~p---------------~~l~~~i~~~~~~g~~v~~~v-----------~t~ 139 (232)
T 3igs_A 89 ---PFLDDVDALAQAGAAIIAVDGTARQRP---------------VAVEALLARIHHHHLLTMADC-----------SSV 139 (232)
T ss_dssp ---CSHHHHHHHHHHTCSEEEEECCSSCCS---------------SCHHHHHHHHHHTTCEEEEEC-----------CSH
T ss_pred ---ccHHHHHHHHHcCCCEEEECccccCCH---------------HHHHHHHHHHHHCCCEEEEeC-----------CCH
Confidence 12347888999999988765432 12 234577788888998775321 123
Q ss_pred HHHHHHHHHHHHCCcCEEEEc--C-Cc-C-CCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcH-HHHHHHHHHcCCCEE
Q 012949 303 SKVAYVAKELHDMGCFEISLG--D-TI-G-VGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQS-LPNILISLQMGISTV 376 (452)
Q Consensus 303 e~l~~~a~~l~~~Gad~I~L~--D-T~-G-~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA-~ANaLaAl~aGa~~V 376 (452)
+.++.+.++|+|.|.+. + |. + ...| -.++++.+++. .+++-. .-|.. ..+...++++||+.|
T Consensus 140 ----eea~~a~~~Gad~Ig~~~~g~t~~~~~~~~--~~~~i~~l~~~--~ipvIA----~GGI~t~~d~~~~~~~GadgV 207 (232)
T 3igs_A 140 ----DDGLACQRLGADIIGTTMSGYTTPDTPEEP--DLPLVKALHDA--GCRVIA----EGRYNSPALAAEAIRYGAWAV 207 (232)
T ss_dssp ----HHHHHHHHTTCSEEECTTTTSSSSSCCSSC--CHHHHHHHHHT--TCCEEE----ESCCCSHHHHHHHHHTTCSEE
T ss_pred ----HHHHHHHhCCCCEEEEcCccCCCCCCCCCC--CHHHHHHHHhc--CCcEEE----ECCCCCHHHHHHHHHcCCCEE
Confidence 34567788999999531 1 11 0 1112 23556666654 334432 23553 578888899999866
Q ss_pred ee
Q 012949 377 DC 378 (452)
Q Consensus 377 D~ 378 (452)
=+
T Consensus 208 ~V 209 (232)
T 3igs_A 208 TV 209 (232)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 87
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=95.76 E-value=0.16 Score=48.04 Aligned_cols=154 Identities=21% Similarity=0.204 Sum_probs=96.1
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHH-hccCCceeEEecchhhhhhhhhhhhhccchhhh
Q 012949 145 VPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVR-DLEGARLPVLTPNLKVILQRSILFQQCHASVIS 223 (452)
Q Consensus 145 ~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~-~~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~ 223 (452)
.+.++-+++++.|.+.|++.||++.-. .+..+.++.++ +.++..+.+-+.-
T Consensus 26 ~~~~~~~~~~~al~~gGv~~iel~~k~--------~~~~~~i~~l~~~~~~l~vgaGtvl-------------------- 77 (224)
T 1vhc_A 26 DNADDILPLADTLAKNGLSVAEITFRS--------EAAADAIRLLRANRPDFLIAAGTVL-------------------- 77 (224)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEETTS--------TTHHHHHHHHHHHCTTCEEEEESCC--------------------
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccC--------chHHHHHHHHHHhCcCcEEeeCcEe--------------------
Confidence 355667899999999999999998532 12344455444 3343332221110
Q ss_pred hhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHH
Q 012949 224 SNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPS 303 (452)
Q Consensus 224 ~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e 303 (452)
..+.++.|+++|++.|+.. -.+ .++++.+++.|..+.. | -.+++
T Consensus 78 -----~~d~~~~A~~aGAd~v~~p--~~d------------------~~v~~~ar~~g~~~i~------G-----v~t~~ 121 (224)
T 1vhc_A 78 -----TAEQVVLAKSSGADFVVTP--GLN------------------PKIVKLCQDLNFPITP------G-----VNNPM 121 (224)
T ss_dssp -----SHHHHHHHHHHTCSEEECS--SCC------------------HHHHHHHHHTTCCEEC------E-----ECSHH
T ss_pred -----eHHHHHHHHHCCCCEEEEC--CCC------------------HHHHHHHHHhCCCEEe------c-----cCCHH
Confidence 1248999999999999533 222 3566888999987642 2 12344
Q ss_pred HHHHHHHHHHHCCcCEEEEcCCcCCCcHHH-H--HHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHc-CCCEEe
Q 012949 304 KVAYVAKELHDMGCFEISLGDTIGVGTPGT-V--VPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQM-GISTVD 377 (452)
Q Consensus 304 ~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~-v--~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~a-Ga~~VD 377 (452)
.+ ..+.++|+|.|.+ .|.. + .+.++.+++.+|.+++.. .=|.-..|.-.-+++ |+..|-
T Consensus 122 e~----~~A~~~Gad~vk~-------Fpa~~~gG~~~lk~l~~~~~~ipvva----iGGI~~~N~~~~l~agga~~v~ 184 (224)
T 1vhc_A 122 AI----EIALEMGISAVKF-------FPAEASGGVKMIKALLGPYAQLQIMP----TGGIGLHNIRDYLAIPNIVACG 184 (224)
T ss_dssp HH----HHHHHTTCCEEEE-------TTTTTTTHHHHHHHHHTTTTTCEEEE----BSSCCTTTHHHHHTSTTBCCEE
T ss_pred HH----HHHHHCCCCEEEE-------eeCccccCHHHHHHHHhhCCCCeEEE----ECCcCHHHHHHHHhcCCCEEEE
Confidence 43 4456789998888 2211 1 467788888777656533 235555688888888 666443
No 88
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=95.73 E-value=0.27 Score=45.54 Aligned_cols=208 Identities=20% Similarity=0.135 Sum_probs=106.7
Q ss_pred HHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEecchhhhhhhhhhhhhccchhhhhhhh
Q 012949 148 GVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLW 227 (452)
Q Consensus 148 ~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~ 227 (452)
++-.++++.+.+.|++.|++.-..... +......+.++.+++..+. ++++-+.-
T Consensus 33 ~~~~~~a~~~~~~G~d~i~v~~~~~~~--~~~~~~~~~i~~i~~~~~i--pvi~~g~i---------------------- 86 (253)
T 1h5y_A 33 GDPVEMAVRYEEEGADEIAILDITAAP--EGRATFIDSVKRVAEAVSI--PVLVGGGV---------------------- 86 (253)
T ss_dssp ECHHHHHHHHHHTTCSCEEEEECCCCT--TTHHHHHHHHHHHHHHCSS--CEEEESSC----------------------
T ss_pred ccHHHHHHHHHHcCCCEEEEEeCCccc--cCCcccHHHHHHHHHhcCC--CEEEECCC----------------------
Confidence 456889999999999999986432110 1000112333444432233 32221110
Q ss_pred ccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCc-EEEEEEee------ecCCCCCC-
Q 012949 228 VYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIP-VRGYVSCV------VGCPVEGA- 299 (452)
Q Consensus 228 ~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~-V~~~l~~~------~g~p~~~r- 299 (452)
...++++.++++|++.|.+... .+.....+.+.+++.|.+ +...+..- .-..-.+.
T Consensus 87 ~~~~~~~~~~~~Gad~V~i~~~----------------~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~~~~~ 150 (253)
T 1h5y_A 87 RSLEDATTLFRAGADKVSVNTA----------------AVRNPQLVALLAREFGSQSTVVAIDAKWNGEYYEVYVKGGRE 150 (253)
T ss_dssp CSHHHHHHHHHHTCSEEEESHH----------------HHHCTHHHHHHHHHHCGGGEEEEEEEEECSSSEEEEETTTTE
T ss_pred CCHHHHHHHHHcCCCEEEEChH----------------HhhCcHHHHHHHHHcCCCcEEEEEEeecCCCcEEEEEeCCee
Confidence 0124778889999999987632 111111233444555642 32222210 00000010
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEE--cCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcH-HHHHHHHHHcCCCEE
Q 012949 300 IPPSKVAYVAKELHDMGCFEISL--GDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQS-LPNILISLQMGISTV 376 (452)
Q Consensus 300 ~d~e~l~~~a~~l~~~Gad~I~L--~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA-~ANaLaAl~aGa~~V 376 (452)
.+.....+.++.+.++|++.|.+ .+..|..... -.++++.+++..+ +++..= -|.. ..+...++++||+.|
T Consensus 151 ~~~~~~~e~~~~~~~~G~d~i~~~~~~~~g~~~~~-~~~~i~~l~~~~~-~pvia~----GGi~~~~~~~~~~~~Ga~~v 224 (253)
T 1h5y_A 151 ATGLDAVKWAKEVEELGAGEILLTSIDRDGTGLGY-DVELIRRVADSVR-IPVIAS----GGAGRVEHFYEAAAAGADAV 224 (253)
T ss_dssp EEEEEHHHHHHHHHHHTCSEEEEEETTTTTTCSCC-CHHHHHHHHHHCS-SCEEEE----SCCCSHHHHHHHHHTTCSEE
T ss_pred cCCCCHHHHHHHHHhCCCCEEEEecccCCCCcCcC-CHHHHHHHHHhcC-CCEEEe----CCCCCHHHHHHHHHcCCcHH
Confidence 00112345567778889999888 3433332111 1345566666543 344442 4554 378888889999865
Q ss_pred eecccCCCCCCCCCCCCCcccHHHHHHHHHcCCCCC
Q 012949 377 DCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVET 412 (452)
Q Consensus 377 D~Sv~GlGecP~a~graGNaalE~vv~~L~~~Gi~t 412 (452)
=+.=.=+. +..+++++...|+..|++.
T Consensus 225 ~vgsal~~---------~~~~~~~~~~~l~~~g~~~ 251 (253)
T 1h5y_A 225 LAASLFHF---------RVLSIAQVKRYLKERGVEV 251 (253)
T ss_dssp EESHHHHT---------TSSCHHHHHHHHHHTTCBC
T ss_pred HHHHHHHc---------CCCCHHHHHHHHHHcCCCC
Confidence 43211111 1245888988998888753
No 89
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=95.61 E-value=0.11 Score=53.93 Aligned_cols=199 Identities=16% Similarity=0.061 Sum_probs=117.5
Q ss_pred hHHHHHHcCCCEEEEEecCC-hH---HHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeee--cC-----------
Q 012949 232 GFEAAIAAGAKEVAIFASAS-EA---FSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVV--GC----------- 294 (452)
Q Consensus 232 ~ie~a~~~Gi~~V~i~~s~S-d~---~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~--g~----------- 294 (452)
.++...++|+..|+|-+.+. +- |...+-=.+.++.+++++.+...+...|.+..+ +..+- +.
T Consensus 165 tVk~~~~AGaAGi~IEDQ~~~~KkCGH~~gk~lvp~ee~v~rI~AAr~A~~~~g~d~vI-iARTDA~~a~l~~s~~d~rd 243 (433)
T 3eol_A 165 IMKAYIEAGAAGVHFEDQLASEKKCGHLGGKVLIPTAAHIRNLNAARLAADVMGTPTLI-VARTDAEAAKLLTSDIDERD 243 (433)
T ss_dssp HHHHHHHHTCSEEEEESBCC---------CCEECCHHHHHHHHHHHHHHHHHHTCCCEE-EEEECTTTCCEESCCCSTTT
T ss_pred HHHHHHHcCCeEEEEecCCCCCCcCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCEEE-EEEcCCccccccccCccccc
Confidence 67888999999999999875 31 111111137899999998777777766755321 11110 00
Q ss_pred -----CCCC---------CCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCc
Q 012949 295 -----PVEG---------AIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQ 360 (452)
Q Consensus 295 -----p~~~---------r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~Gl 360 (452)
.+.. +...+...+=++...+ |||.|.+ .+ +.-+++++.++.+.++..+|...+.+-+--.+..
T Consensus 244 ~~fl~g~g~r~~eG~y~~~~gld~AI~Ra~AY~~-GAD~If~-e~-~~~~~eei~~f~~~v~~~~P~~~L~~~~sPsfnw 320 (433)
T 3eol_A 244 QPFVDYEAGRTAEGFYQVKNGIEPCIARAIAYAP-YCDLIWM-ET-SKPDLAQARRFAEAVHKAHPGKLLAYNCSPSFNW 320 (433)
T ss_dssp GGGBCSSSCBCTTCCEEBCCSHHHHHHHHHHHGG-GCSEEEE-CC-SSCCHHHHHHHHHHHHHHSTTCCEEEECCSSSCH
T ss_pred ccceeccCcccccccccccCCHHHHHHHHHHHHh-cCCEEEE-eC-CCCCHHHHHHHHHHhcccCCCcccccCCCCCCcc
Confidence 0000 1234555555556667 9999988 22 3458999999999999888875566533222221
Q ss_pred ----H---HHHH-HHHHHcCCCEEeecccCCCCCCCCCCCCCcccHHHHHHHHHcCCCCCCCChhhHHHHHHHHHHHhCC
Q 012949 361 ----S---LPNI-LISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVETNVDLRKLMLAGDFINKHLGR 432 (452)
Q Consensus 361 ----A---~ANa-LaAl~aGa~~VD~Sv~GlGecP~a~graGNaalE~vv~~L~~~Gi~t~iDl~~L~~la~~v~~~~g~ 432 (452)
. +.+- -.--++|+.+|-.++.++ ++-+.++.+++..+...|....++ .+-.++..+..|+
T Consensus 321 ~~~~~~~~~~~f~~eLa~lGv~~v~~~~a~~--------raa~~A~~~~a~~i~~~G~~ayve----~Q~~e~~~~~~g~ 388 (433)
T 3eol_A 321 KKNLDDATIAKFQRELGAMGYKFQFITLAGF--------HQLNYGMFELARGYKDRQMAAYSE----LQQAEFAAEADGY 388 (433)
T ss_dssp HHHSCHHHHHHHHHHHHHHTEEEEEETTHHH--------HHHHHHHHHHHHHHHHHTHHHHHH----HHHHHHHHGGGTC
T ss_pred cccCChhHHhHHHHHHHHcCCeEEEeCcHHH--------HHHHHHHHHHHHHHHHcCCHHHHH----HHHHhhhhhccCc
Confidence 1 1121 223358999999998887 778899999998887655322122 2222333456788
Q ss_pred CCCCCcccccchhh
Q 012949 433 PSGSKTAIALNRIA 446 (452)
Q Consensus 433 ~~p~~~pi~G~~vf 446 (452)
..-.++-.+|.+-|
T Consensus 389 ~~~~hq~~~g~~y~ 402 (433)
T 3eol_A 389 TATKHQREVGTGYF 402 (433)
T ss_dssp CCC--------CHH
T ss_pred eeeecccccccchH
Confidence 88777777776655
No 90
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=95.56 E-value=0.1 Score=50.85 Aligned_cols=178 Identities=12% Similarity=0.065 Sum_probs=104.1
Q ss_pred EEEeCCc---cccCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhc---cCCceeEEe
Q 012949 128 KIVEVGP---RDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDL---EGARLPVLT 201 (452)
Q Consensus 128 ~I~D~TL---RDG~Q~~~~~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~---~~~~l~~l~ 201 (452)
.|+++|. .||.+. .+.+..++.++.+.+.|.+.|++|.-++.. .+.+.+...++.+ .++.+++=+
T Consensus 15 EilN~Tpdsf~dg~~~----~~~~~a~~~a~~~v~~GAdiIDIg~~s~~~-----eE~~rv~~vi~~l~~~~~~pisIDT 85 (271)
T 2yci_X 15 ERINGMFKDIREAILN----KDPRPIQEWARRQAEKGAHYLDVNTGPTAD-----DPVRVMEWLVKTIQEVVDLPCCLDS 85 (271)
T ss_dssp EEEETTSHHHHHHHHT----TCCHHHHHHHHHHHHTTCSEEEEECCSCSS-----CHHHHHHHHHHHHHHHCCCCEEEEC
T ss_pred EecCCChhhHHHhhhh----CCHHHHHHHHHHHHHCCCCEEEEcCCcCch-----hHHHHHHHHHHHHHHhCCCeEEEeC
Confidence 3677883 345553 566889999999999999999999765432 1234444444433 344444322
Q ss_pred cchhhhhhhhhhhhhccchhhhhhhhccHHhHHHHHHc--CCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHh
Q 012949 202 PNLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAA--GAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKV 279 (452)
Q Consensus 202 ~~~~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~--Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~ 279 (452)
.. .+-+++|+++ |.+.|.=..... +++.+++..+++
T Consensus 86 ~~--------------------------~~v~~aal~a~~Ga~iINdvs~~~----------------d~~~~~~~~~a~ 123 (271)
T 2yci_X 86 TN--------------------------PDAIEAGLKVHRGHAMINSTSADQ----------------WKMDIFFPMAKK 123 (271)
T ss_dssp SC--------------------------HHHHHHHHHHCCSCCEEEEECSCH----------------HHHHHHHHHHHH
T ss_pred CC--------------------------HHHHHHHHHhCCCCCEEEECCCCc----------------cccHHHHHHHHH
Confidence 22 2367888888 988876322210 334566677888
Q ss_pred CCCcEEEEEEeeecCCCCCCCC----HHHHHHHHHHHHHCCcC--EEEEcCCcCC--CcHHHHHHHHHHHHH---hC-CC
Q 012949 280 LSIPVRGYVSCVVGCPVEGAIP----PSKVAYVAKELHDMGCF--EISLGDTIGV--GTPGTVVPMLEAVMA---VV-PV 347 (452)
Q Consensus 280 ~G~~V~~~l~~~~g~p~~~r~d----~e~l~~~a~~l~~~Gad--~I~L~DT~G~--~~P~~v~~li~~l~~---~~-p~ 347 (452)
.|..+. ++.. . +.....+ .+++.+..+.+.++|++ .|.|==.+|. -+.++-.++++.++. .. |+
T Consensus 124 ~~~~vv--~m~~-d-~~G~p~t~~~~~~~l~~~~~~a~~~Gi~~~~IilDPg~gfigk~~~~~~~~l~~l~~~~~~~~p~ 199 (271)
T 2yci_X 124 YEAAII--GLTM-N-EKGVPKDANDRSQLAMELVANADAHGIPMTELYIDPLILPVNVAQEHAVEVLETIRQIKLMANPA 199 (271)
T ss_dssp HTCEEE--EESC-B-TTBCCCSHHHHHHHHHHHHHHHHHTTCCGGGEEEECCCCCTTTSTHHHHHHHHHHHHHTTSSSSC
T ss_pred cCCCEE--EEec-C-CCCCCCCHHHHHHHHHHHHHHHHHCCCCcccEEEecCCCccccCHHHHHHHHHHHHHHHHhCCCC
Confidence 898764 4432 0 0111233 45667777888899986 4766223333 145566666666653 34 55
Q ss_pred ccEEEEeCC-CcCc
Q 012949 348 EKLAVHLHD-TYGQ 360 (452)
Q Consensus 348 ~~l~vH~Hn-d~Gl 360 (452)
.|+-+=.+| .+|+
T Consensus 200 ~p~l~G~Snksfg~ 213 (271)
T 2yci_X 200 PRTVLGLSNVSQKC 213 (271)
T ss_dssp CEEEEEGGGGGTTC
T ss_pred CCEEEeeCccccCC
Confidence 566664444 2453
No 91
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=95.54 E-value=0.17 Score=48.29 Aligned_cols=232 Identities=16% Similarity=0.066 Sum_probs=113.3
Q ss_pred CCCccEEEeCCccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcc-cccCCH---HHHHHHHHhccCCcee
Q 012949 123 IPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWV-PQLADA---RDVMEAVRDLEGARLP 198 (452)
Q Consensus 123 ~p~~V~I~D~TLRDG~Q~~~~~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~-p~~~D~---e~v~~~i~~~~~~~l~ 198 (452)
.|.++-|..-|+|+. ++.++ .++.+.++|++.||+.......+. +.-.+. +++.+.+++ .++++.
T Consensus 15 ~~~~~gi~~~~~~~~-------~~~~~---~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gl~i~ 83 (295)
T 3cqj_A 15 KQIPLGIYEKALPAG-------ECWLE---RLQLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVE-TGVRVP 83 (295)
T ss_dssp -CCCEEEEGGGSCCC-------SCHHH---HHHHHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHH-HCCEEE
T ss_pred ccccceeeeecCCCC-------CCHHH---HHHHHHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHH-cCCeEE
Confidence 445566777777642 34444 556677899999999764321000 000122 233333332 356665
Q ss_pred EEe-cchhhhhhhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHH
Q 012949 199 VLT-PNLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAA 277 (452)
Q Consensus 199 ~l~-~~~~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~A 277 (452)
++. +... .+.+.......-+.......+.++.|.+.|++.|.+... .. ..........+...+.+.++.++|
T Consensus 84 ~~~~~~~~-----~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG~~~v~~~~~-~~-~~~~~~~~~~~~~~~~l~~l~~~a 156 (295)
T 3cqj_A 84 SMCLSAHR-----RFPLGSEDDAVRAQGLEIMRKAIQFAQDVGIRVIQLAGY-DV-YYQEANNETRRRFRDGLKESVEMA 156 (295)
T ss_dssp EEEEGGGG-----TSCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCEEEECCC-SC-SSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred EEecCccc-----CCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCC-CC-CcCcCHHHHHHHHHHHHHHHHHHH
Confidence 543 2110 000110000000000001234778888899999887521 11 000000012345566677788899
Q ss_pred HhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEE-cCCcC----CCcHHHHHHHHHHHHHhCCCccEEE
Q 012949 278 KVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISL-GDTIG----VGTPGTVVPMLEAVMAVVPVEKLAV 352 (452)
Q Consensus 278 k~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L-~DT~G----~~~P~~v~~li~~l~~~~p~~~l~v 352 (452)
++.|+++. +... +...-.+++.+.++++.+ +.+.+.+ -|+.= -..| .+.++.+..+ ...+
T Consensus 157 ~~~Gv~l~--lEn~---~~~~~~~~~~~~~l~~~v---~~~~vg~~~D~~h~~~~g~d~---~~~l~~~~~~----i~~v 221 (295)
T 3cqj_A 157 SRAQVTLA--MEIM---DYPLMNSISKALGYAHYL---NNPWFQLYPDIGNLSAWDNDV---QMELQAGIGH----IVAV 221 (295)
T ss_dssp HHHTCEEE--EECC---SSGGGCSHHHHHHHHHHH---CCTTEEEECBHHHHHSSSCCH---HHHHHHTGGG----BCCE
T ss_pred HHhCCEEE--EeeC---CCcccCCHHHHHHHHHhc---CCCCeEEEeccchHhhcCCCH---HHHHHHhccc----eEEE
Confidence 99998754 3321 111123567777776655 3332322 26521 1123 2333333222 3568
Q ss_pred EeCCCcCcHHHHHHHHHHcCCCEEeecccCCCCCCCCCCCCCcccHHHHHHHHHcCCCC
Q 012949 353 HLHDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVE 411 (452)
Q Consensus 353 H~Hnd~GlA~ANaLaAl~aGa~~VD~Sv~GlGecP~a~graGNaalE~vv~~L~~~Gi~ 411 (452)
|++|..+ |.+ . -..+| .|..+.+.++..|+..|++
T Consensus 222 Hl~D~~~------------g~~--~--~~p~G--------~G~id~~~~~~~L~~~gy~ 256 (295)
T 3cqj_A 222 HVKDTKP------------GVF--K--NVPFG--------EGVVDFERCFETLKQSGYC 256 (295)
T ss_dssp EECEEET------------TEE--E--EECTT--------SSSCCHHHHHHHHHHTTCC
T ss_pred EeecCCC------------Ccc--C--CcCCC--------CCccCHHHHHHHHHHCCCc
Confidence 9998731 211 1 12233 4789999999999987664
No 92
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=95.52 E-value=0.2 Score=46.61 Aligned_cols=208 Identities=12% Similarity=0.008 Sum_probs=104.9
Q ss_pred HHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEecchhhhhhhhhhhhhccchhhhhhhhccHH
Q 012949 152 ELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLWVYLQ 231 (452)
Q Consensus 152 ~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~~~~~ 231 (452)
+.++.+.++|++.||+..+. -.+.+++.+.+++ .++++.++................ ..+.-+.......+
T Consensus 19 ~~l~~~~~~G~~~vEl~~~~-------~~~~~~~~~~l~~-~gl~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~ 89 (260)
T 1k77_A 19 ERFAAARKAGFDAVEFLFPY-------NYSTLQIQKQLEQ-NHLTLALFNTAPGDINAGEWGLSA-LPGREHEAHADIDL 89 (260)
T ss_dssp GHHHHHHHHTCSEEECSCCT-------TSCHHHHHHHHHH-TTCEEEEEECCCCCGGGTCSCSTT-CTTCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEecCCC-------CCCHHHHHHHHHH-cCCceEEEecCCcccccccCCCCC-ChhHHHHHHHHHHH
Confidence 34566677899999997531 1245566665554 356665543211000000000000 00000000011234
Q ss_pred hHHHHHHcCCCEEEEEecCChHHHhhhcCCCHH----HHHHHHHHHHHHHHhCCCcEEEEEEeeecC--CCCCCCCHHHH
Q 012949 232 GFEAAIAAGAKEVAIFASASEAFSKSNINCSIE----DSLVRYRAVAHAAKVLSIPVRGYVSCVVGC--PVEGAIPPSKV 305 (452)
Q Consensus 232 ~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e----~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~--p~~~r~d~e~l 305 (452)
.++.|.+.|++.|.+.....+ .+.+.+ ...+.+.++.++|++.|+++. +...-.. |...-.+++.+
T Consensus 90 ~i~~a~~lG~~~v~~~~g~~~------~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~--~E~~~~~~~~~~~~~~~~~~ 161 (260)
T 1k77_A 90 ALEYALALNCEQVHVMAGVVP------AGEDAERYRAVFIDNIRYAADRFAPHGKRIL--VEALSPGVKPHYLFSSQYQA 161 (260)
T ss_dssp HHHHHHHTTCSEEECCCCBCC------TTSCHHHHHHHHHHHHHHHHHHHGGGTCEEE--ECCCCTTTSTTBSCCSHHHH
T ss_pred HHHHHHHcCCCEEEECcCCCC------CCCCHHHHHHHHHHHHHHHHHHHHHcCCEEE--EEeCCccCCCcCccCCHHHH
Confidence 778888999999987543211 112333 455666677788999998754 3321000 01112456666
Q ss_pred HHHHHHHHHCCcC--EEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEeecccCC
Q 012949 306 AYVAKELHDMGCF--EISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCSVAGL 383 (452)
Q Consensus 306 ~~~a~~l~~~Gad--~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~Sv~Gl 383 (452)
.++++.+ +.+ .+++ |+.=...-. .+....+++ +.+--..+|+||..|
T Consensus 162 ~~l~~~~---~~~~~g~~~-D~~h~~~~~--~d~~~~l~~-~~~~i~~vH~~D~~~------------------------ 210 (260)
T 1k77_A 162 LAIVEEV---ARDNVFIQL-DTFHAQKVD--GNLTHLIRD-YAGKYAHVQIAGLPD------------------------ 210 (260)
T ss_dssp HHHHHHH---CCTTEEEEE-EHHHHHHHT--CCHHHHHHH-TTTSEEEEEECCTTT------------------------
T ss_pred HHHHHHh---CCCCEEEEe-eHHHHHhhC--CCHHHHHHH-hhhheeEEEECCCCC------------------------
Confidence 6666554 332 2333 653111100 112233333 333346889998753
Q ss_pred CCCCCCCCCCCcccHHHHHHHHHcCCCC
Q 012949 384 GGCPYAKGASGNVATEDVVYMLSGLGVE 411 (452)
Q Consensus 384 GecP~a~graGNaalE~vv~~L~~~Gi~ 411 (452)
.+ .+| .|..+.+.++..|+..|++
T Consensus 211 -r~--~~G-~G~id~~~~~~~L~~~gy~ 234 (260)
T 1k77_A 211 -RH--EPD-DGEINYPWLFRLFDEVGYQ 234 (260)
T ss_dssp -CC--CSS-SSSSCHHHHHHHHHHTTCC
T ss_pred -CC--CCC-CCccCHHHHHHHHHHcCCC
Confidence 11 122 5789999999999987765
No 93
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=95.50 E-value=0.2 Score=49.09 Aligned_cols=209 Identities=13% Similarity=0.101 Sum_probs=117.1
Q ss_pred EEeCCccccCCCCCCCCCHHHHHHHHHHHHHC--CCCEEEEecCCCCCcccccCCHHHHHHHHHh-cc--CCceeEEe--
Q 012949 129 IVEVGPRDGLQNEKNTVPTGVKVELIRRLVSS--GLPVVEATSFVSPKWVPQLADARDVMEAVRD-LE--GARLPVLT-- 201 (452)
Q Consensus 129 I~D~TLRDG~Q~~~~~~~~~~k~~i~~~L~~~--Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~-~~--~~~l~~l~-- 201 (452)
.+|-|+= +..-+.++..++++...+. |+..+.+- |.|+| ...+.++. -. ++++...+
T Consensus 35 ~IDhTlL------~p~~T~~dI~~lc~eA~~~~~~~aaVCV~----p~~V~------~a~~~L~~~gs~~~v~v~tVigF 98 (281)
T 2a4a_A 35 LTDHTFL------DENGTEDDIRELCNESVKTCPFAAAVCVY----PKFVK------FINEKIKQEINPFKPKIACVINF 98 (281)
T ss_dssp TEEEECC------CTTCCHHHHHHHHHHHHSSSSCCSEEEEC----GGGHH------HHHHHHHHHSSSCCSEEEEEEST
T ss_pred HcchhcC------CCCCCHHHHHHHHHHHHhccCCccEEEEC----HHHHH------HHHHHhhccCCCCCceEEEEeCC
Confidence 4566653 2245899999999999999 99999873 33333 23444542 12 45655444
Q ss_pred cchhhhhhhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHH---HHHHHHHHHHHHHH
Q 012949 202 PNLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIE---DSLVRYRAVAHAAK 278 (452)
Q Consensus 202 ~~~~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e---~~l~~~~~~v~~Ak 278 (452)
|.-. .+.+ .....++.|++.|+++|.+.+....... ...+ +..+.+..+.+.+.
T Consensus 99 P~G~-----------~~~~-------~Kv~E~~~Av~~GAdEIDmVinig~lks-----g~~~~~~~v~~eI~~v~~a~~ 155 (281)
T 2a4a_A 99 PYGT-----------DSME-------KVLNDTEKALDDGADEIDLVINYKKIIE-----NTDEGLKEATKLTQSVKKLLT 155 (281)
T ss_dssp TTCC-----------SCHH-------HHHHHHHHHHHHTCSEEEEECCHHHHHH-----SHHHHHHHHHHHHHHHHTTCT
T ss_pred CCCC-----------CCHH-------HHHHHHHHHHHcCCCEEEEecchHhhhC-----CChhHHHHHHHHHHHHHHHhc
Confidence 2111 1111 1234788999999999999987654311 1123 44555544444443
Q ss_pred hCCCcEEEEEEeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEc--CCcCCCcHHHHHHHHHHHHHh------CCCccE
Q 012949 279 VLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLG--DTIGVGTPGTVVPMLEAVMAV------VPVEKL 350 (452)
Q Consensus 279 ~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~--DT~G~~~P~~v~~li~~l~~~------~p~~~l 350 (452)
+..+-+-|. .....+.+.+.+.++.+.++|||-|--. =+.|.++|+.+.-|.+.+++. .+. ++
T Consensus 156 --~~~lKVIlE------t~~L~d~e~i~~A~~ia~eaGADfVKTSTGf~~~gAT~edv~lm~~~v~~~~~~~~~tg~-~v 226 (281)
T 2a4a_A 156 --NKILKVIIE------VGELKTEDLIIKTTLAVLNGNADFIKTSTGKVQINATPSSVEYIIKAIKEYIKNNPEKNN-KI 226 (281)
T ss_dssp --TSEEEEECC------HHHHCSHHHHHHHHHHHHTTTCSEEECCCSCSSCCCCHHHHHHHHHHHHHHHHHCGGGTT-CC
T ss_pred --CCceEEEEe------cccCCcHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCHHHHHHHHHHHHHhhcccccCCC-Cc
Confidence 333322122 1123456668889999999999988765 233678999998888777532 021 23
Q ss_pred EEEeCC---CcCcHHHHHHHHH-HcCCCEEeecccCCCC
Q 012949 351 AVHLHD---TYGQSLPNILISL-QMGISTVDCSVAGLGG 385 (452)
Q Consensus 351 ~vH~Hn---d~GlA~ANaLaAl-~aGa~~VD~Sv~GlGe 385 (452)
.+-.-- |+--|++-..++. ..|.+|++....=+|-
T Consensus 227 gVKaaGGIrt~e~al~~i~aga~~lG~~w~~~~~~RiGt 265 (281)
T 2a4a_A 227 GLKVSGGISDLNTASHYILLARRFLSSLACHPDNFRIGS 265 (281)
T ss_dssp EEEEESSCCSHHHHHHHHHHHHHHTC------CCEEEEE
T ss_pred eEEEeCCCCCHHHHHHHHHHhhhhccccccccCceEEec
Confidence 333221 4444444443333 3677788877776766
No 94
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=95.41 E-value=0.35 Score=47.71 Aligned_cols=125 Identities=15% Similarity=0.109 Sum_probs=83.9
Q ss_pred hHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHHH
Q 012949 232 GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKE 311 (452)
Q Consensus 232 ~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~ 311 (452)
.++.|++.|++.|.+.+...+ ....+.++.+.++++.|+++|+++.+ ++..|... ..+++.+...++.
T Consensus 130 ~ve~Av~~GAdaV~~~i~~Gs--------~~~~~~l~~i~~v~~~a~~~GlpvIi--e~~~G~~~--~~d~e~i~~aari 197 (295)
T 3glc_A 130 SMDDAVRLNSCAVAAQVYIGS--------EYEHQSIKNIIQLVDAGMKVGMPTMA--VTGVGKDM--VRDQRYFSLATRI 197 (295)
T ss_dssp CHHHHHHTTCSEEEEEECTTS--------TTHHHHHHHHHHHHHHHHTTTCCEEE--EECC------CCSHHHHHHHHHH
T ss_pred HHHHHHHCCCCEEEEEEECCC--------CcHHHHHHHHHHHHHHHHHcCCEEEE--ECCCCCcc--CCCHHHHHHHHHH
Confidence 688999999998877654322 12457888899999999999998763 22222111 2577778889999
Q ss_pred HHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEe--CCCcCcHHHHHHHHHHcCCCEEee
Q 012949 312 LHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHL--HDTYGQSLPNILISLQMGISTVDC 378 (452)
Q Consensus 312 l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~--Hnd~GlA~ANaLaAl~aGa~~VD~ 378 (452)
+.++|||.|-..=| ++. ++.+.+..+ +|+-+=. +-+.--++.+...|+++||+.+-.
T Consensus 198 A~elGAD~VKt~~t-----~e~----~~~vv~~~~-vPVv~~GG~~~~~~~~l~~v~~ai~aGA~Gv~v 256 (295)
T 3glc_A 198 AAEMGAQIIKTYYV-----EKG----FERIVAGCP-VPIVIAGGKKLPEREALEMCWQAIDQGASGVDM 256 (295)
T ss_dssp HHHTTCSEEEEECC-----TTT----HHHHHHTCS-SCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHhCCCEEEeCCC-----HHH----HHHHHHhCC-CcEEEEECCCCCHHHHHHHHHHHHHhCCeEEEe
Confidence 99999999988743 233 344554443 2444432 223345678888999999985543
No 95
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=95.39 E-value=0.61 Score=45.91 Aligned_cols=213 Identities=11% Similarity=0.042 Sum_probs=125.6
Q ss_pred EEeCCccccCCCCCCCCCHHHHHHHHHHHH-HCCCCEEEEecCCCCCcccccCCHHHHHHHHHhc----cCCceeEEe--
Q 012949 129 IVEVGPRDGLQNEKNTVPTGVKVELIRRLV-SSGLPVVEATSFVSPKWVPQLADARDVMEAVRDL----EGARLPVLT-- 201 (452)
Q Consensus 129 I~D~TLRDG~Q~~~~~~~~~~k~~i~~~L~-~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~----~~~~l~~l~-- 201 (452)
++|-|+ .+...+.++..++++.-. +.++..+.+ +|.|+| ...+.++.. .++++...+
T Consensus 29 ~IDhTl------L~p~~T~e~I~~lc~eA~~~~~~aaVCV----~P~~V~------~a~~~L~~~~~~~s~v~V~tVigF 92 (297)
T 4eiv_A 29 FFEVAA------LTDGETNESVAAVCKIAAKDPAIVGVSV----RPAFVR------FIRQELVKSAPEVAGIKVCAAVNF 92 (297)
T ss_dssp TEEEEE------CSTTCCHHHHHHHHHHHHSSSCCSEEEE----CGGGHH------HHHHTGGGTCGGGGGSEEEEEEST
T ss_pred hcCccC------CCCCCCHHHHHHHHHHHHhhcCcEEEEE----CHHHHH------HHHHHhcccCcCCCCCeEEEEecC
Confidence 567776 233568899999999888 788888887 343443 223444331 345555443
Q ss_pred cchhhhhhhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCC
Q 012949 202 PNLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLS 281 (452)
Q Consensus 202 ~~~~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G 281 (452)
|.-. .+.+ +.....+.|++.|+++|.+.+....+.. +.....+...+.+..+.+.+...-
T Consensus 93 P~G~-----------~~~e-------~K~~Ea~~Av~~GAdEIDmVinig~lk~--~~~g~~~~V~~eI~~v~~a~~~~~ 152 (297)
T 4eiv_A 93 PEGT-----------GTPD-------TVSLEAVGALKDGADEIECLIDWRRMNE--NVADGESRIRLLVSEVKKVVGPKT 152 (297)
T ss_dssp TTCC-----------CCHH-------HHHHHHHHHHHTTCSEEEEECCTHHHHH--CHHHHHHHHHHHHHHHHHHHTTSE
T ss_pred CCCC-----------CCHH-------HHHHHHHHHHHcCCCEEEeeeeHHHHhc--ccCCcHHHHHHHHHHHHHHhcCCc
Confidence 2211 1111 1234678899999999999988765422 111224455666666666664222
Q ss_pred CcEEEEEEeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCC--cCCCcHHHHHHHHHHHHHhC---C----------
Q 012949 282 IPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDT--IGVGTPGTVVPMLEAVMAVV---P---------- 346 (452)
Q Consensus 282 ~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~DT--~G~~~P~~v~~li~~l~~~~---p---------- 346 (452)
++|. | +..-..+.+.+.+.++.+.++|||-|--.-- .|.++|+.++-|.+.+++.+ |
T Consensus 153 lKVI--l------Et~~Lt~~e~i~~A~~ia~~AGADFVKTSTGf~~~gAT~edV~lM~~~v~~~~~~~~~~~~~~~~~~ 224 (297)
T 4eiv_A 153 LKVV--L------SGGELQGGDIISRAAVAALEGGADFLQTSSGLGATHATMFTVHLISIALREYMVRENERIRVEGINR 224 (297)
T ss_dssp EEEE--C------CSSCCCCHHHHHHHHHHHHHHTCSEEECCCSSSSCCCCHHHHHHHHHHHHHHHCC------------
T ss_pred eEEE--E------ecccCCcHHHHHHHHHHHHHhCCCEEEcCCCCCCCCCCHHHHHHHHHHHHHHhcccccccccccccc
Confidence 2332 2 1222345555788999999999998765443 24689999999988887432 1
Q ss_pred ----CccEEEEeC----CCcCcHHHHHHHHHHcCCCEEeecccCCCC
Q 012949 347 ----VEKLAVHLH----DTYGQSLPNILISLQMGISTVDCSVAGLGG 385 (452)
Q Consensus 347 ----~~~l~vH~H----nd~GlA~ANaLaAl~aGa~~VD~Sv~GlGe 385 (452)
...+++-.- .|+-.|++-..++-+.|-+|++....=+|.
T Consensus 225 ~~~tg~~vgvKAs~GGIrt~e~A~~~i~~~~elG~~wl~~~~fRiGa 271 (297)
T 4eiv_A 225 EGAAVRCIGIKIEVGDVHMAETADFLMQMIFENGPRSIVRDKFRVGG 271 (297)
T ss_dssp ------CCEEEEECTTCCHHHHHHHHHHHHHHHCGGGCSTTTEEEEE
T ss_pred ccccCCceeEEecCCCCCCHHHHHHHHHHHHHhCccccCCCceEecc
Confidence 113555554 444455554444445676776666665554
No 96
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=95.36 E-value=0.18 Score=52.27 Aligned_cols=199 Identities=15% Similarity=0.062 Sum_probs=122.7
Q ss_pred hHHHHHHcCCCEEEEEecCC-hH---HHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCC-------C--
Q 012949 232 GFEAAIAAGAKEVAIFASAS-EA---FSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVE-------G-- 298 (452)
Q Consensus 232 ~ie~a~~~Gi~~V~i~~s~S-d~---~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~-------~-- 298 (452)
.++..+++|+..|+|-+.+. +- |...+-=.+.++.++++..+...+...|.+... +..+- ..-+ .
T Consensus 168 tvk~~i~AGaaGi~IEDq~~~~KkCGH~~gk~lvp~~e~v~rI~AAr~A~~~~g~d~vI-iARTD-a~~a~li~s~~d~~ 245 (429)
T 1f8m_A 168 LQKALIAAGVAGSHWEDQLASEKKCGHLGGKVLIPTQQHIRTLTSARLAADVADVPTVV-IARTD-AEAATLITSDVDER 245 (429)
T ss_dssp HHHHHHHTTCSEEEEECBCGGGCCCTTSSCCEECCHHHHHHHHHHHHHHHHHTTCCCEE-EEEEC-TTTCCEESCCCSTT
T ss_pred HHHHHHHcCCEEEEEecCCCccccccCCCCCeeeCHHHHHHHHHHHHHHHHhcCCCEEE-EEEec-hhhhcccccccccc
Confidence 67888999999999999873 31 111111146899999998777777667776321 12110 0000 0
Q ss_pred -----------------CCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcC--
Q 012949 299 -----------------AIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYG-- 359 (452)
Q Consensus 299 -----------------r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~G-- 359 (452)
....+...+=++...+ |||.|.+. .|.-+++++.++.+.++..+|...|.+=+--.+.
T Consensus 246 d~~fl~g~~~~eg~y~~~~gld~AI~Ra~AYa~-gAD~if~e--~~~~~~eei~~f~~~v~~~~P~~~La~n~sPsf~w~ 322 (429)
T 1f8m_A 246 DQPFITGERTREGFYRTKNGIEPCIARAKAYAP-FADLIWME--TGTPDLEAARQFSEAVKAEYPDQMLAYNCSPSFNWK 322 (429)
T ss_dssp TGGGEEEEECTTSCEEECCSHHHHHHHHHHHGG-GCSEEEEC--CSSCCHHHHHHHHHHHHTTCTTCEEEEECCTTSCHH
T ss_pred ccccccCCCCcccccccccCHHHHHHHHHHHHh-cCCEEEeC--CCCCCHHHHHHHHHHhcccCCCceeecCCCCCCCcc
Confidence 1223455555555666 89999874 2346899999999999987887545432211111
Q ss_pred --cH---HHH-HHHHHHcCCCEEeecccCCCCCCCCCCCCCcccHHHHHHHHHcCCCCCCCChhhHHHHHHHHHHHhCCC
Q 012949 360 --QS---LPN-ILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVETNVDLRKLMLAGDFINKHLGRP 433 (452)
Q Consensus 360 --lA---~AN-aLaAl~aGa~~VD~Sv~GlGecP~a~graGNaalE~vv~~L~~~Gi~t~iDl~~L~~la~~v~~~~g~~ 433 (452)
+. +++ .-..-++|+.++=.++.++ ++-+.++++++..+...|... ... .+-.++-.+..|+.
T Consensus 323 ~~~~~~~~~~f~~eL~~lG~~~v~~~l~~~--------raa~~a~~~~a~~~~~~G~~a---y~e-~Q~~e~~~~~~g~~ 390 (429)
T 1f8m_A 323 KHLDDATIAKFQKELAAMGFKFQFITLAGF--------HALNYSMFDLAYGYAQNQMSA---YVE-LQEREFAAEERGYT 390 (429)
T ss_dssp HHCCHHHHHHHHHHHHHHTEEEEEETTHHH--------HHHHHHHHHHHHHHHHHTHHH---HHH-HHHHHHHHGGGTCC
T ss_pred cccchhhHhHHHHHHHHcCCeEEEECcHHH--------HHHHHHHHHHHHHHHHcCChH---HHH-HhHHHHhhhccCcc
Confidence 00 111 2234469999999999887 777899999998888755311 112 22223333456888
Q ss_pred CCCCcccccchhhh
Q 012949 434 SGSKTAIALNRIAA 447 (452)
Q Consensus 434 ~p~~~pi~G~~vf~ 447 (452)
.-.++-.+|.+.|.
T Consensus 391 ~~~hq~~~G~~~~d 404 (429)
T 1f8m_A 391 ATKHQREVGAGYFD 404 (429)
T ss_dssp TTSHHHHTTHHHHH
T ss_pred hhhhhhhhccchHH
Confidence 77888888876653
No 97
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=95.36 E-value=0.2 Score=49.60 Aligned_cols=199 Identities=12% Similarity=0.027 Sum_probs=124.8
Q ss_pred cccCCCCCC--CCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhc-cCCceeEEecchhhhhhhh
Q 012949 135 RDGLQNEKN--TVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDL-EGARLPVLTPNLKVILQRS 211 (452)
Q Consensus 135 RDG~Q~~~~--~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~-~~~~l~~l~~~~~~~i~r~ 211 (452)
+.+.+..+. ..+.+....+++...+.+-+.|--.+...-++.+ . .+...++.. ....+++.+.. .
T Consensus 23 ~~~~yAV~AfNv~n~e~~~Avl~AAee~~sPvIlq~s~g~~~y~g---~--~~~~~~~~~A~~~~VPVaLHl-D------ 90 (306)
T 3pm6_A 23 RTHSFAIPAICVYNLEGILAIIRAAEHKRSPAMILLFPWAIQYAD---S--LLVRTAASACRAASVPITLHL-D------ 90 (306)
T ss_dssp HHTTCCEEEEECSSHHHHHHHHHHHHHTTCCEEEEECHHHHHHHT---T--HHHHHHHHHHHHCSSCEEEEE-E------
T ss_pred HHCCcEEEEEeeCCHHHHHHHHHHHHHhCCCEEEEcChhHHhhcc---H--HHHHHHHHHHHHCCCCEEEEc-C------
Confidence 345555543 4788999999999999999977655432111111 0 122222221 11233332210 0
Q ss_pred hhhhhccchhhhhhhhccHHhHHHHHHc--------CCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCc
Q 012949 212 ILFQQCHASVISSNLWVYLQGFEAAIAA--------GAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIP 283 (452)
Q Consensus 212 ~~~~~~~~~~i~~~~~~~~~~ie~a~~~--------Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~ 283 (452)
.+ ...+.+..|+++ |..-|.+=.|. .+.+|.++.-++++++|+..|+.
T Consensus 91 ----Hg----------~~~e~i~~ai~~~~~~~~~~GFtSVMiDgS~----------~p~eENi~~Tk~vv~~ah~~gvs 146 (306)
T 3pm6_A 91 ----HA----------QDPEIIKRAADLSRSETHEPGFDSIMVDMSH----------FSKEENLRLTRELVAYCNARGIA 146 (306)
T ss_dssp ----EE----------CCHHHHHHHHHTC------CCCSEEEECCTT----------SCHHHHHHHHHHHHHHHHTTTCE
T ss_pred ----CC----------CCHHHHHHHHHhhhhccCCCCCCEEEEeCCC----------CCHHHHHHHHHHHHHHHHHcCCe
Confidence 01 023477889998 99988874442 24689999999999999999999
Q ss_pred EEEEEEeeecCCCC---------CCCCHHHHHHHHHHHHHCCcCEEEEcCCcC----CCc---HHHHHHHHHHHHHhC-C
Q 012949 284 VRGYVSCVVGCPVE---------GAIPPSKVAYVAKELHDMGCFEISLGDTIG----VGT---PGTVVPMLEAVMAVV-P 346 (452)
Q Consensus 284 V~~~l~~~~g~p~~---------~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G----~~~---P~~v~~li~~l~~~~-p 346 (452)
|.+.|-..-|.+|. -.++|+...+++ +.|+|.+.+ ++| .-. |.-=.++++.+++.+ +
T Consensus 147 VEaElG~igG~Edgv~~~~~~~~~yT~Peea~~Fv----~TgvD~LAv--aiGt~HG~Yk~~~p~Ld~~~L~~I~~~v~~ 220 (306)
T 3pm6_A 147 TEAEPGRIEGGEDGVQDTVDLEGVLTTPEESEEFV----ATGINWLAP--AFGNVHGNYGPRGVQLDYERLQRINEAVGE 220 (306)
T ss_dssp EEECSSBCCCCBTTBCCCTTCCCBCCCHHHHHHHH----TTTCSEECC--CSSCCSSCCCTTCCCCCHHHHHHHHHHHTT
T ss_pred EEEEeeeeccccCCccccccccccCCCHHHHHHHH----HcCCCEEEE--EcCccccCcCCCCCccCHHHHHHHHHHhCC
Confidence 98777665444432 247888887766 379994443 444 222 222355677777776 3
Q ss_pred CccEEEEeCCCcCcHHHHHHHHHHcCCCEEe
Q 012949 347 VEKLAVHLHDTYGQSLPNILISLQMGISTVD 377 (452)
Q Consensus 347 ~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD 377 (452)
.+||.+|. --|..-.....|+..|+.-|+
T Consensus 221 ~vpLVlHG--gSG~p~e~i~~ai~~GV~KiN 249 (306)
T 3pm6_A 221 RVGLVLHG--ADPFTKEIFEKCIERGVAKVN 249 (306)
T ss_dssp TSEEEECS--CTTCCHHHHHHHHHTTEEEEE
T ss_pred CCCEEeeC--CCCCCHHHHHHHHHcCCeEEE
Confidence 56777665 457888899999999987553
No 98
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=95.30 E-value=0.58 Score=45.60 Aligned_cols=148 Identities=11% Similarity=0.115 Sum_probs=91.6
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecCCCCCc---ccccCCHHHHHHHHHhccCCc-eeEEecchhhhhhhhhhhhhccc
Q 012949 144 TVPTGVKVELIRRLVSSGLPVVEATSFVSPKW---VPQLADARDVMEAVRDLEGAR-LPVLTPNLKVILQRSILFQQCHA 219 (452)
Q Consensus 144 ~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~---~p~~~D~e~v~~~i~~~~~~~-l~~l~~~~~~~i~r~~~~~~~~~ 219 (452)
..+.++.++-++.|.+.|++.|-+.......+ .|...+..++++.+++.++.. +.....+..
T Consensus 32 ~r~~e~i~~ei~~l~~~G~~ei~l~g~~~~~yG~~~~~~~~l~~Ll~~l~~~~gi~~ir~~~~~p~-------------- 97 (304)
T 2qgq_A 32 SRSIEDITREVEDLLKEGKKEIILVAQDTTSYGIDLYRKQALPDLLRRLNSLNGEFWIRVMYLHPD-------------- 97 (304)
T ss_dssp BCCHHHHHHHHHHHHHTTCCEEEEECTTGGGTTHHHHSSCCHHHHHHHHHTSSSSCEEEECCCCGG--------------
T ss_pred eeCHHHHHHHHHHHHHCCCcEEEEEeEcccccCCCCCcHHHHHHHHHHHHhcCCCcEEEEeeeecc--------------
Confidence 46889999999999999999887643110000 111235677888887665543 111111111
Q ss_pred hhhhhhhhccHHhHHHHHHcC--CCEEEEEe-cCChHHHhhhcC--CCHHHHHHHHHHHHHHHHh--CCCcEEEEEEeee
Q 012949 220 SVISSNLWVYLQGFEAAIAAG--AKEVAIFA-SASEAFSKSNIN--CSIEDSLVRYRAVAHAAKV--LSIPVRGYVSCVV 292 (452)
Q Consensus 220 ~~i~~~~~~~~~~ie~a~~~G--i~~V~i~~-s~Sd~~~~~~~~--~s~e~~l~~~~~~v~~Ak~--~G~~V~~~l~~~~ 292 (452)
. ...+.++...++| ++.|.+.+ +.|+.-.+. ++ .+.+ .+.++++.+++ .|+.+...++ +
T Consensus 98 -~------l~~e~l~~l~~~g~~~~~l~i~lqs~s~~vl~~-m~r~~t~e----~~~~~i~~l~~~~~gi~i~~~~I--v 163 (304)
T 2qgq_A 98 -H------LTEEIISAMLELDKVVKYFDVPVQHGSDKILKL-MGRTKSSE----ELKKMLSSIRERFPDAVLRTSII--V 163 (304)
T ss_dssp -G------CCHHHHHHHHHCTTBCCEEECCCBCSCHHHHHH-TTCCSCHH----HHHHHHHHHHHHCTTCEEEEEEE--E
T ss_pred -c------CCHHHHHHHHhCCCCccEEEEecccCCHHHHHH-hCCCCCHH----HHHHHHHHHHhhCCCCEEEEEEE--E
Confidence 0 1234678888899 88898876 456644433 33 3444 44456677777 6888876666 5
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHCCcCEEEE
Q 012949 293 GCPVEGAIPPSKVAYVAKELHDMGCFEISL 322 (452)
Q Consensus 293 g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L 322 (452)
|.|.+ +.+.+.+.++.+.+.+++.+.+
T Consensus 164 G~PgE---t~ed~~~t~~~l~~l~~~~v~~ 190 (304)
T 2qgq_A 164 GFPGE---TEEDFEELKQFVEEIQFDKLGA 190 (304)
T ss_dssp CCTTC---CHHHHHHHHHHHHHHCCSEEEE
T ss_pred eCCCC---CHHHHHHHHHHHHHcCCCEEEE
Confidence 66655 4678888888888888876653
No 99
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=95.22 E-value=0.14 Score=48.96 Aligned_cols=169 Identities=11% Similarity=0.003 Sum_probs=100.2
Q ss_pred HHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEecchhhhhhhhhhhhhccchhhhhhhhc
Q 012949 149 VKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLWV 228 (452)
Q Consensus 149 ~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~~ 228 (452)
.-.+-++.+.+.|++.+.+...- -.++|.+.--..+.+.+++.....+-.++.+.
T Consensus 27 ~l~~~i~~~~~~gad~lhvDvmD-G~fvpn~t~G~~~v~~lr~~~~~DvhLMv~~p------------------------ 81 (237)
T 3cu2_A 27 QLNEEVTTLLENQINVLHFDIAD-GQFSSLFTVGAIGIKYFPTHCFKDVHLMVRNQ------------------------ 81 (237)
T ss_dssp GHHHHHHHHHHTTCCEEEEEEEB-SSSSSCBCBCTHHHHTSCTTSEEEEEEECSCH------------------------
T ss_pred cHHHHHHHHHHcCCCEEEEEEec-CccccchhhhHHHHHHHhhhCCCCeEEEEECH------------------------
Confidence 33445788889999987665311 11334443223455666543321111122211
Q ss_pred cHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhC---------CCcEEEEEEeeecCCCCCC
Q 012949 229 YLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVL---------SIPVRGYVSCVVGCPVEGA 299 (452)
Q Consensus 229 ~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~---------G~~V~~~l~~~~g~p~~~r 299 (452)
...++.++++|++.|.+..-..+ .+.+.++.+|+. |.++.+.+. |.
T Consensus 82 -~~~i~~~~~aGAd~itvH~ea~~----------------~~~~~i~~i~~~~~~~~~~~~g~~~gv~l~-----p~--- 136 (237)
T 3cu2_A 82 -LEVAKAVVANGANLVTLQLEQYH----------------DFALTIEWLAKQKTTYANQVYPVLIGACLC-----PE--- 136 (237)
T ss_dssp -HHHHHHHHHTTCSEEEEETTCTT----------------SHHHHHHHHTTCEEEETTEEEECEEEEEEC-----TT---
T ss_pred -HHHHHHHHHcCCCEEEEecCCcc----------------cHHHHHHHHHhcccccccccCCceEEEEEe-----CC---
Confidence 12688999999999877664433 134677888999 888764442 21
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEE----cCCcCCCcHHHHHHHHHHHHHhCC----CccEEEEeCCCcCcHHHHHHHHHH-
Q 012949 300 IPPSKVAYVAKELHDMGCFEISL----GDTIGVGTPGTVVPMLEAVMAVVP----VEKLAVHLHDTYGQSLPNILISLQ- 370 (452)
Q Consensus 300 ~d~e~l~~~a~~l~~~Gad~I~L----~DT~G~~~P~~v~~li~~l~~~~p----~~~l~vH~Hnd~GlA~ANaLaAl~- 370 (452)
++.+.+.++.. ++|.|.+ +-..|...+....+.|+.+++..+ ..+|++ |-|.-..|+-..++
T Consensus 137 Tp~~~l~~~l~-----~~D~vlvMsv~pgfggq~f~~~~l~ki~~lr~~~~~~~~~~~I~v----dGGI~~~~~~~~~~~ 207 (237)
T 3cu2_A 137 TPISELEPYLD-----QIDVIQLLTLDPRNGTKYPSELILDRVIQVEKRLGNRRVEKLINI----DGSMTLELAKYFKQG 207 (237)
T ss_dssp SCGGGGTTTTT-----TCSEEEEESEETTTTEECCHHHHHHHHHHHHHHHGGGGGGCEEEE----ESSCCHHHHHHHHHS
T ss_pred ChHHHHHHHhh-----cCceeeeeeeccCcCCeecChhHHHHHHHHHHHHHhcCCCceEEE----ECCcCHHHHHHHHHh
Confidence 22333333322 5887755 233344445666777777777654 235555 78999999999999
Q ss_pred -cCCCEE
Q 012949 371 -MGISTV 376 (452)
Q Consensus 371 -aGa~~V 376 (452)
+||+.+
T Consensus 208 ~aGad~~ 214 (237)
T 3cu2_A 208 THQIDWL 214 (237)
T ss_dssp SSCCCCE
T ss_pred CCCCcEE
Confidence 999855
No 100
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=95.20 E-value=0.26 Score=51.10 Aligned_cols=199 Identities=13% Similarity=0.034 Sum_probs=121.7
Q ss_pred hHHHHHHcCCCEEEEEecCChH----HHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEee--ecC----CCCC---
Q 012949 232 GFEAAIAAGAKEVAIFASASEA----FSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCV--VGC----PVEG--- 298 (452)
Q Consensus 232 ~ie~a~~~Gi~~V~i~~s~Sd~----~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~--~g~----p~~~--- 298 (452)
.++..+++|+..|+|-+.+... |...+-=.+.+++++++..+...++..|.+..+ +..+ .+. .+..
T Consensus 172 ~vk~~~~aGaaGi~iEDq~~~~KkCGH~~gk~lv~~~e~v~rI~Aar~A~~~~g~d~~I-iARTDa~~a~l~~s~~d~~d 250 (439)
T 3i4e_A 172 LMKAMIEAGASGVHFEDQLASVKKCGHMGGKVLVPTREAVAKLTAARLAADVMGTPTVL-VARTDAEAADLITSDIDDND 250 (439)
T ss_dssp HHHHHHHHTCSEEEEESBCGGGCBCSTTCBCCBCCHHHHHHHHHHHHHHHHHHTCCCEE-EEEECTTTCCEESCCCCTTT
T ss_pred HHHHHHHcCCEEEEEeCCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEE-EEEcCccccccccccccccc
Confidence 7788899999999999987531 111111247899999998777777767765321 1111 000 0000
Q ss_pred ----------------CCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcC---
Q 012949 299 ----------------AIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYG--- 359 (452)
Q Consensus 299 ----------------r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~G--- 359 (452)
+...+...+=++...+ |||.|.+- .|.-+++++.++.+.++..+|...+.+-+--.+.
T Consensus 251 ~~fi~G~r~~eg~~~~~~gldeAI~Ra~AY~~-GAD~if~E--~~~~~~eei~~f~~~v~~~~P~~~l~~~~sPsfnw~~ 327 (439)
T 3i4e_A 251 KPYLTGERTVEGFFRTKPGLEQAISRGLAYAP-YADLIWCE--TGKPDLEYAKKFAEAIHKQFPGKLLSYNCSPSFNWKK 327 (439)
T ss_dssp GGGEEEEECTTSCEEECCSHHHHHHHHHHHTT-TCSEEEEC--CSSCCHHHHHHHHHHHHHHSTTCEEEEECCSSSCHHH
T ss_pred chhhcccCcccccccccCCHHHHHHHHHHHHh-hCCEEEec--CCCCCHHHHHHHHHHhcccCCceEEeeCCCCCCcCcc
Confidence 1234555555555566 99999881 2456899999999999988897555543222222
Q ss_pred -cH---HHH-HHHHHHcCCCEEeecccCCCCCCCCCCCCCcccHHHHHHHHHcCCCCCCCChhhHHHHHHHHHHHhCCCC
Q 012949 360 -QS---LPN-ILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVETNVDLRKLMLAGDFINKHLGRPS 434 (452)
Q Consensus 360 -lA---~AN-aLaAl~aGa~~VD~Sv~GlGecP~a~graGNaalE~vv~~L~~~Gi~t~iDl~~L~~la~~v~~~~g~~~ 434 (452)
+. +++ .-.--++|+.++=.++.|+ ++-+.++++++..+...|... ... .+--++..+..|+..
T Consensus 328 ~~~~~~~~~f~~eL~~lGv~~v~~~la~~--------raa~~A~~~~a~~i~~~Gm~a---yve-~Q~~e~~~~~~g~~~ 395 (439)
T 3i4e_A 328 NLDDATIAKFQKELGAMGYKFQFITLAGF--------HALNYSMFNLAHGYARTQMSA---FVE-LQQAEFAAADKGFTA 395 (439)
T ss_dssp HSCHHHHHTHHHHHHHHTCCEEEETTHHH--------HHHHHHHHHHHHHHHHHTHHH---HHH-HHHHHHHHTTTTCCT
T ss_pred cCCHHHHHHHHHHHHHcCCeEEEeChHHH--------HHHHHHHHHHHHHHHHhCCHH---HHH-HHHHhhhhhhcCcce
Confidence 11 111 1223358999999999888 788999999988887654211 111 222222334556666
Q ss_pred CCCcccccchhh
Q 012949 435 GSKTAIALNRIA 446 (452)
Q Consensus 435 p~~~pi~G~~vf 446 (452)
-.++-.+|.+-|
T Consensus 396 ~~hq~~~G~~y~ 407 (439)
T 3i4e_A 396 VKHQREVGTGYF 407 (439)
T ss_dssp TSHHHHTTHHHH
T ss_pred eecccccccchH
Confidence 666666665544
No 101
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=95.20 E-value=1.5 Score=40.96 Aligned_cols=183 Identities=11% Similarity=0.025 Sum_probs=98.6
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEecchhhhhhhhhhhhhccchhhh
Q 012949 144 TVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVIS 223 (452)
Q Consensus 144 ~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~ 223 (452)
..+.++..++++...+.|+..+-+- |.+++ ...+.++ +.++...+ +.. .+.. ...
T Consensus 16 ~~t~~~i~~l~~~a~~~g~~~v~v~----~~~v~------~~~~~l~---~v~v~~v~-~~P------~g~~-----~~~ 70 (225)
T 1mzh_A 16 HLSEKEIEEFVLKSEELGIYAVCVN----PYHVK------LASSIAK---KVKVCCVI-GFP------LGLN-----KTS 70 (225)
T ss_dssp TCCHHHHHHHHHHHHHTTCSEEEEC----GGGHH------HHHHHCS---SSEEEEEE-STT------TCCS-----CHH
T ss_pred CCCHHHHHHHHHHHHHhCCeEEEEC----HHHHH------HHHHHhc---CCceeeEe-cCC------CCcc-----chh
Confidence 4689999999999999999988852 22222 1122222 34444332 110 0000 000
Q ss_pred hhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHH
Q 012949 224 SNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPS 303 (452)
Q Consensus 224 ~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e 303 (452)
.....++.|++.|++.|.+.+..+-.. ....+..++.+ +..++..-++.+-+... ....+.+
T Consensus 71 ----~k~~~~~~A~~~Gad~Id~viN~g~~~-----~~~~~~~~~~i----~~v~~a~~pv~vKvi~e-----~~~l~~~ 132 (225)
T 1mzh_A 71 ----VKVKEAVEAVRDGAQELDIVWNLSAFK-----SEKYDFVVEEL----KEIFRETPSAVHKVIVE-----TPYLNEE 132 (225)
T ss_dssp ----HHHHHHHHHHHTTCSEEEEECCHHHHH-----TTCHHHHHHHH----HHHHHTCTTSEEEEECC-----GGGCCHH
T ss_pred ----hhHHHHHHHHHcCCCEEEEEecHHHHh-----cCChHHHHHHH----HHHHHHhcCceEEEEEe-----CCCCCHH
Confidence 012356788999999999876554421 11234444443 33333221332223211 1124677
Q ss_pred HHHHHHHHHHHCCcCEEEEcCC---cCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEE
Q 012949 304 KVAYVAKELHDMGCFEISLGDT---IGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTV 376 (452)
Q Consensus 304 ~l~~~a~~l~~~Gad~I~L~DT---~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~V 376 (452)
.+.++++.+.++|+|.| -..| .|..+++.++.+.+.+...+| |-.=. ..- -...+++.+++||+.|
T Consensus 133 ~~~~~a~~a~eaGad~I-~tstg~~~gga~~~~i~~v~~~v~~~ip---Via~G--GI~-t~~da~~~l~aGA~~i 201 (225)
T 1mzh_A 133 EIKKAVEICIEAGADFI-KTSTGFAPRGTTLEEVRLIKSSAKGRIK---VKASG--GIR-DLETAISMIEAGADRI 201 (225)
T ss_dssp HHHHHHHHHHHHTCSEE-ECCCSCSSSCCCHHHHHHHHHHHTTSSE---EEEES--SCC-SHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHhCCCEE-EECCCCCCCCCCHHHHHHHHHHhCCCCc---EEEEC--CCC-CHHHHHHHHHhCchHH
Confidence 89999999999999999 3344 233455555555444322233 32211 111 1467888889999976
No 102
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=95.19 E-value=0.46 Score=47.33 Aligned_cols=216 Identities=15% Similarity=0.079 Sum_probs=126.5
Q ss_pred HHHHHHCCCCEEEEecC-CC--CCcccc--cCCHHHHHHHHHhccC-C-ceeEEecchhhhhhhhhhhhhccchhhhhhh
Q 012949 154 IRRLVSSGLPVVEATSF-VS--PKWVPQ--LADARDVMEAVRDLEG-A-RLPVLTPNLKVILQRSILFQQCHASVISSNL 226 (452)
Q Consensus 154 ~~~L~~~Gv~~IEvG~~-~s--~~~~p~--~~D~e~v~~~i~~~~~-~-~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~ 226 (452)
++.++++||+.|=+|.. ++ ....|- .-..++++..++.+.. + .+++++..- .+|+ .+.++.+
T Consensus 52 A~i~e~aGfdai~vs~~~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~~PviaD~d-------~Gyg-~~~~v~~--- 120 (318)
T 1zlp_A 52 AAVVEKTGFHAAFVSGYSVSAAMLGLPDFGLLTTTEVVEATRRITAAAPNLCVVVDGD-------TGGG-GPLNVQR--- 120 (318)
T ss_dssp HHHHHHTTCSEEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHHHSSSSEEEEECT-------TCSS-SHHHHHH---
T ss_pred HHHHHHcCCCEEEECcHHHhhHhcCCCCCCCCCHHHHHHHHHHHHhhccCCCEEEeCC-------CCCC-CHHHHHH---
Confidence 56778899999999863 21 111222 1355777777776532 2 345444221 3455 3344333
Q ss_pred hccHHhHHHHHHcCCCEEEEEecCChH---HHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCC-CCCH
Q 012949 227 WVYLQGFEAAIAAGAKEVAIFASASEA---FSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEG-AIPP 302 (452)
Q Consensus 227 ~~~~~~ie~a~~~Gi~~V~i~~s~Sd~---~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~-r~d~ 302 (452)
.+.+..++|+.-|+|-....+- |...+-=.+.++..++++.+++....-++.|.+-- ++. ....
T Consensus 121 -----tv~~l~~aGaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ARt-------da~a~~gl 188 (318)
T 1zlp_A 121 -----FIRELISAGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVART-------DARAPHGL 188 (318)
T ss_dssp -----HHHHHHHTTCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEEEE-------CTHHHHHH
T ss_pred -----HHHHHHHcCCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhcccCCcEEEEee-------HHhhhcCH
Confidence 6677788999999999876421 11101013577888888766666555556554211 110 0112
Q ss_pred HHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCc-HHHHHHHHHHcCCCEEeeccc
Q 012949 303 SKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQ-SLPNILISLQMGISTVDCSVA 381 (452)
Q Consensus 303 e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~Gl-A~ANaLaAl~aGa~~VD~Sv~ 381 (452)
+...+=++...++|||.|.+. |+-+++.+.++.+. ++ +|+-+-.-. +|. ..-..-.--++|+++|-....
T Consensus 189 ~~ai~Ra~Ay~eAGAd~i~~e---~~~~~e~~~~i~~~----l~-~P~lan~~~-~g~~~~~~~~eL~~lGv~~v~~~~~ 259 (318)
T 1zlp_A 189 EEGIRRANLYKEAGADATFVE---APANVDELKEVSAK----TK-GLRIANMIE-GGKTPLHTPEEFKEMGFHLIAHSLT 259 (318)
T ss_dssp HHHHHHHHHHHHTTCSEEEEC---CCCSHHHHHHHHHH----SC-SEEEEEECT-TSSSCCCCHHHHHHHTCCEEEECSH
T ss_pred HHHHHHHHHHHHcCCCEEEEc---CCCCHHHHHHHHHh----cC-CCEEEEecc-CCCCCCCCHHHHHHcCCeEEEEchH
Confidence 456667788889999999986 33455655555444 44 344332221 111 111133445789999988877
Q ss_pred CCCCCCCCCCCCCcccHHHHHHHHHcCC
Q 012949 382 GLGGCPYAKGASGNVATEDVVYMLSGLG 409 (452)
Q Consensus 382 GlGecP~a~graGNaalE~vv~~L~~~G 409 (452)
++ |+-+.++++++..|+..|
T Consensus 260 ~~--------raa~~a~~~~~~~l~~~g 279 (318)
T 1zlp_A 260 AV--------YATARALVNIMKILKEKG 279 (318)
T ss_dssp HH--------HHHHHHHHHHHHHHHHHS
T ss_pred HH--------HHHHHHHHHHHHHHHHcC
Confidence 66 677888999988888644
No 103
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=95.16 E-value=0.35 Score=45.28 Aligned_cols=154 Identities=21% Similarity=0.181 Sum_probs=96.0
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHH-hccCCceeEEecchhhhhhhhhhhhhccchhhh
Q 012949 145 VPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVR-DLEGARLPVLTPNLKVILQRSILFQQCHASVIS 223 (452)
Q Consensus 145 ~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~-~~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~ 223 (452)
.+.++-+++++.|.+.|++.||++.-. .+..+.++.++ ..++..+.+-+ .
T Consensus 25 ~~~~~~~~~~~al~~gGv~~iel~~k~--------~~~~~~i~~l~~~~~~~~vgagt--v------------------- 75 (214)
T 1wbh_A 25 KKLEHAVPMAKALVAGGVRVLNVTLRT--------ECAVDAIRAIAKEVPEAIVGAGT--V------------------- 75 (214)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEESCS--------TTHHHHHHHHHHHCTTSEEEEES--C-------------------
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCC--------hhHHHHHHHHHHHCcCCEEeeCE--E-------------------
Confidence 355667899999999999999999532 12344555443 33333222111 0
Q ss_pred hhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHH
Q 012949 224 SNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPS 303 (452)
Q Consensus 224 ~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e 303 (452)
...++++.|+++|++.|+.- -.+ .++++.+++.|..+.. | -.+++
T Consensus 76 ----i~~d~~~~A~~aGAd~v~~p--~~d------------------~~v~~~~~~~g~~~i~------G-----~~t~~ 120 (214)
T 1wbh_A 76 ----LNPQQLAEVTEAGAQFAISP--GLT------------------EPLLKAATEGTIPLIP------G-----ISTVS 120 (214)
T ss_dssp ----CSHHHHHHHHHHTCSCEEES--SCC------------------HHHHHHHHHSSSCEEE------E-----ESSHH
T ss_pred ----EEHHHHHHHHHcCCCEEEcC--CCC------------------HHHHHHHHHhCCCEEE------e-----cCCHH
Confidence 01258999999999999743 222 2567888999987642 1 12344
Q ss_pred HHHHHHHHHHHCCcCEEEEcCCcCCCcHH-HH--HHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHc-CCCEEe
Q 012949 304 KVAYVAKELHDMGCFEISLGDTIGVGTPG-TV--VPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQM-GISTVD 377 (452)
Q Consensus 304 ~l~~~a~~l~~~Gad~I~L~DT~G~~~P~-~v--~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~a-Ga~~VD 377 (452)
.+ ..+.++|+|.|.+ .|. .+ .+.++.+++.+|.+++-. .=|.-..|.-.-+++ |+..|-
T Consensus 121 e~----~~A~~~Gad~v~~-------Fpa~~~gG~~~lk~i~~~~~~ipvva----iGGI~~~n~~~~l~agg~~~v~ 183 (214)
T 1wbh_A 121 EL----MLGMDYGLKEFKF-------FPAEANGGVKALQAIAGPFSQVRFCP----TGGISPANYRDYLALKSVLCIG 183 (214)
T ss_dssp HH----HHHHHTTCCEEEE-------TTTTTTTHHHHHHHHHTTCTTCEEEE----BSSCCTTTHHHHHTSTTBSCEE
T ss_pred HH----HHHHHCCCCEEEE-------ecCccccCHHHHHHHhhhCCCCeEEE----ECCCCHHHHHHHHhcCCCeEEE
Confidence 43 4456789998887 221 11 467788888787666533 234555688888888 666544
No 104
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=95.14 E-value=1 Score=41.17 Aligned_cols=159 Identities=13% Similarity=0.132 Sum_probs=93.1
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEecchhhhhhhhhhhhhccchhhhh
Q 012949 145 VPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISS 224 (452)
Q Consensus 145 ~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~ 224 (452)
.+.++-.++++.+.+.|++.|++.... + +..+.+..+++..+..+.+-.-...
T Consensus 16 ~d~~~~~~~~~~~~~~G~~~i~l~~~~-~-------~~~~~i~~i~~~~~~~l~vg~g~~~------------------- 68 (212)
T 2v82_A 16 ITPDEALAHVGAVIDAGFDAVEIPLNS-P-------QWEQSIPAIVDAYGDKALIGAGTVL------------------- 68 (212)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEETTS-T-------THHHHHHHHHHHHTTTSEEEEECCC-------------------
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCC-h-------hHHHHHHHHHHhCCCCeEEEecccc-------------------
Confidence 467788999999999999999997542 1 1112223332212222221000000
Q ss_pred hhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHH
Q 012949 225 NLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSK 304 (452)
Q Consensus 225 ~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~ 304 (452)
..+.++.++++|++.|++ +..+ .++++.++++|.++. .| -.+++.
T Consensus 69 ----~~~~i~~a~~~Gad~V~~--~~~~------------------~~~~~~~~~~g~~~~------~g-----~~t~~e 113 (212)
T 2v82_A 69 ----KPEQVDALARMGCQLIVT--PNIH------------------SEVIRRAVGYGMTVC------PG-----CATATE 113 (212)
T ss_dssp ----SHHHHHHHHHTTCCEEEC--SSCC------------------HHHHHHHHHTTCEEE------CE-----ECSHHH
T ss_pred ----CHHHHHHHHHcCCCEEEe--CCCC------------------HHHHHHHHHcCCCEE------ee-----cCCHHH
Confidence 123789999999999872 2111 134577888898754 11 123444
Q ss_pred HHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCC-CccEEEEeCCCcCcHHHHHHHHHHcCCCEEee
Q 012949 305 VAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVP-VEKLAVHLHDTYGQSLPNILISLQMGISTVDC 378 (452)
Q Consensus 305 l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p-~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~ 378 (452)
+ ..+.+.|+|.|.+--|. + .-.+.++.+++.++ .+++..= =|....|....+++||+.|-+
T Consensus 114 ~----~~a~~~G~d~v~v~~t~----~-~g~~~~~~l~~~~~~~ipvia~----GGI~~~~i~~~~~~Ga~gv~v 175 (212)
T 2v82_A 114 A----FTALEAGAQALKIFPSS----A-FGPQYIKALKAVLPSDIAVFAV----GGVTPENLAQWIDAGCAGAGL 175 (212)
T ss_dssp H----HHHHHTTCSEEEETTHH----H-HCHHHHHHHHTTSCTTCEEEEE----SSCCTTTHHHHHHHTCSEEEE
T ss_pred H----HHHHHCCCCEEEEecCC----C-CCHHHHHHHHHhccCCCeEEEe----CCCCHHHHHHHHHcCCCEEEE
Confidence 3 34567899998873221 1 12356667777666 4455442 344456778888899997764
No 105
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=95.10 E-value=0.45 Score=48.61 Aligned_cols=122 Identities=11% Similarity=0.102 Sum_probs=85.1
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 310 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~ 310 (452)
+.++.+.+.+++.+.|... +. .+ ..+++++-+.|.+|. |+. +..+.+.+...++
T Consensus 125 ~svd~l~~~~vd~~KIgS~--~~--------------~N-~pLL~~va~~gKPVi--LSt-------GmaTl~Ei~~Ave 178 (385)
T 1vli_A 125 GSADLLQSTSPSAFKIASY--EI--------------NH-LPLLKYVARLNRPMI--FST-------AGAEISDVHEAWR 178 (385)
T ss_dssp HHHHHHHTTCCSCEEECGG--GT--------------TC-HHHHHHHHTTCSCEE--EEC-------TTCCHHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEECcc--cc--------------cC-HHHHHHHHhcCCeEE--EEC-------CCCCHHHHHHHHH
Confidence 4677777778888887532 11 11 145566667899986 442 4568999999999
Q ss_pred HHHHCCcCEEEEcC-CcCCCcHHHHHHH--HHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEeecc
Q 012949 311 ELHDMGCFEISLGD-TIGVGTPGTVVPM--LEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCSV 380 (452)
Q Consensus 311 ~l~~~Gad~I~L~D-T~G~~~P~~v~~l--i~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~Sv 380 (452)
.+.+.|...|.|+- +.++=+|....+| |..+++.+|..+|++=-|-. |- .+-+++|+.+||++|+.=+
T Consensus 179 ~i~~~Gn~~iiLlhc~s~YPtp~~~~nL~aI~~Lk~~f~~lpVG~SdHt~-G~-~~~~~AAvAlGA~iIEkHf 249 (385)
T 1vli_A 179 TIRAEGNNQIAIMHCVAKYPAPPEYSNLSVIPMLAAAFPEAVIGFSDHSE-HP-TEAPCAAVRLGAKLIEKHF 249 (385)
T ss_dssp HHHTTTCCCEEEEEECSSSSCCGGGCCTTHHHHHHHHSTTSEEEEEECCS-SS-SHHHHHHHHTTCSEEEEEB
T ss_pred HHHHCCCCcEEEEeccCCCCCChhhcCHHHHHHHHHHcCCCCEEeCCCCC-Cc-hHHHHHHHHcCCCEEEeCC
Confidence 99999986555532 4555556555554 88889999667898866653 42 7788999999999886544
No 106
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=95.10 E-value=0.22 Score=48.63 Aligned_cols=213 Identities=14% Similarity=0.077 Sum_probs=130.9
Q ss_pred HHHHHHCCCCEEEEecC-CC-CCcccc--cCCHHHHHHHHHhccC-CceeEEecchhhhhhhhhhhhhccchhhhhhhhc
Q 012949 154 IRRLVSSGLPVVEATSF-VS-PKWVPQ--LADARDVMEAVRDLEG-ARLPVLTPNLKVILQRSILFQQCHASVISSNLWV 228 (452)
Q Consensus 154 ~~~L~~~Gv~~IEvG~~-~s-~~~~p~--~~D~e~v~~~i~~~~~-~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~~ 228 (452)
++.++++||+.|=+|+. ++ ....|- .-..++++..++.+.+ +.+++++.. . .+|+..+.++.+
T Consensus 29 A~~~~~aG~~ai~vsg~s~a~~~G~pD~~~vt~~em~~~~~~I~~~~~~pviaD~-d------~Gyg~~~~~~~~----- 96 (275)
T 2ze3_A 29 ARLLEAAGFTAIGTTSAGIAHARGRTDGQTLTRDEMGREVEAIVRAVAIPVNADI-E------AGYGHAPEDVRR----- 96 (275)
T ss_dssp HHHHHHHTCSCEEECHHHHHHHSCCCSSSSSCHHHHHHHHHHHHHHCSSCEEEEC-T------TCSSSSHHHHHH-----
T ss_pred HHHHHHcCCCEEEECcHHHHHhCCCCCCCCCCHHHHHHHHHHHHhhcCCCEEeec-C------CCCCCCHHHHHH-----
Confidence 56777899999999842 11 111222 1356778877776532 334544422 1 346544444443
Q ss_pred cHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCC--------
Q 012949 229 YLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAI-------- 300 (452)
Q Consensus 229 ~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~-------- 300 (452)
.+.+..++|+.-|+|-..... ..+-=.+.++..++++.+++.+++.|++..+ +.. -++...
T Consensus 97 ---~v~~l~~aGaagv~iED~~~~---~~k~l~~~~e~~~~I~aa~~a~~~~g~~~~i-~aR----tda~~~~~g~~~~~ 165 (275)
T 2ze3_A 97 ---TVEHFAALGVAGVNLEDATGL---TPTELYDLDSQLRRIEAARAAIDASGVPVFL-NAR----TDTFLKGHGATDEE 165 (275)
T ss_dssp ---HHHHHHHTTCSEEEEECBCSS---SSSCBCCHHHHHHHHHHHHHHHHHHTSCCEE-EEE----CCTTTTTCSSSHHH
T ss_pred ---HHHHHHHcCCcEEEECCCcCC---CCCccCCHHHHHHHHHHHHHhHhhcCCCeEE-EEe----chhhhccccccchh
Confidence 667778899999999987641 1122247888999998888777777877431 111 011101
Q ss_pred CHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEeecc
Q 012949 301 PPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCSV 380 (452)
Q Consensus 301 d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~Sv 380 (452)
..+...+=++...++|||.|.+.= +-+++.+.++.+. ++ +|+-+-+.. ++- ..-.--++|+++|-...
T Consensus 166 ~~~~ai~Ra~ay~eAGAd~i~~e~---~~~~~~~~~i~~~----~~-~P~n~~~~~--~~~--~~~eL~~lGv~~v~~~~ 233 (275)
T 2ze3_A 166 RLAETVRRGQAYADAGADGIFVPL---ALQSQDIRALADA----LR-VPLNVMAFP--GSP--VPRALLDAGAARVSFGQ 233 (275)
T ss_dssp HHHHHHHHHHHHHHTTCSEEECTT---CCCHHHHHHHHHH----CS-SCEEEECCT--TSC--CHHHHHHTTCSEEECTT
T ss_pred hHHHHHHHHHHHHHCCCCEEEECC---CCCHHHHHHHHHh----cC-CCEEEecCC--CCC--CHHHHHHcCCcEEEECh
Confidence 235666677788899999999853 3345666555544 43 245443332 222 22444578999998776
Q ss_pred cCCCCCCCCCCCCCcccHHHHHHHHHcCC
Q 012949 381 AGLGGCPYAKGASGNVATEDVVYMLSGLG 409 (452)
Q Consensus 381 ~GlGecP~a~graGNaalE~vv~~L~~~G 409 (452)
.++ |+-+.++++++..++..|
T Consensus 234 ~~~--------raa~~a~~~~~~~i~~~g 254 (275)
T 2ze3_A 234 SLM--------LATLGLVQRMAAELHAAE 254 (275)
T ss_dssp HHH--------HHHHHHHHHHHHHHHHHS
T ss_pred HHH--------HHHHHHHHHHHHHHHHhC
Confidence 665 667888999988888767
No 107
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=95.10 E-value=1.5 Score=42.97 Aligned_cols=137 Identities=13% Similarity=0.140 Sum_probs=85.6
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecCCCCCccccc-CCHHHHHHHHHhccCC-ceeEEecchhhhhhhhhhhhhccchh
Q 012949 144 TVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQL-ADARDVMEAVRDLEGA-RLPVLTPNLKVILQRSILFQQCHASV 221 (452)
Q Consensus 144 ~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~-~D~e~v~~~i~~~~~~-~l~~l~~~~~~~i~r~~~~~~~~~~~ 221 (452)
.++.++..++++.+.+.|+..|-++. .- |-+ .|..++++.+++.... .+...+.+.. +
T Consensus 49 ~ls~e~i~~~i~~~~~~g~~~i~~tG-GE----Pll~~~l~~li~~~~~~~~~~~i~i~TNG~l--l------------- 108 (340)
T 1tv8_A 49 LLTFDEMARIAKVYAELGVKKIRITG-GE----PLMRRDLDVLIAKLNQIDGIEDIGLTTNGLL--L------------- 108 (340)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEES-SC----GGGSTTHHHHHHHHTTCTTCCEEEEEECSTT--H-------------
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEeC-CC----ccchhhHHHHHHHHHhCCCCCeEEEEeCccc--h-------------
Confidence 58999999999999999999888864 22 322 2455666666654332 3333332221 0
Q ss_pred hhhhhhccHHhHHHHHHcCCCEEEEEecC-Ch-HHHhhhcCC-CHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCC
Q 012949 222 ISSNLWVYLQGFEAAIAAGAKEVAIFASA-SE-AFSKSNINC-SIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEG 298 (452)
Q Consensus 222 i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~-Sd-~~~~~~~~~-s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~ 298 (452)
.+.++..+++|++.|.|.+-. ++ .|.+..-+. + ++++.+.++.+++.|+.|.++.. + .+.
T Consensus 109 --------~~~~~~L~~~g~~~v~iSld~~~~~~~~~i~~~~~~----~~~v~~~i~~l~~~g~~v~i~~v--v-~~g-- 171 (340)
T 1tv8_A 109 --------KKHGQKLYDAGLRRINVSLDAIDDTLFQSINNRNIK----ATTILEQIDYATSIGLNVKVNVV--I-QKG-- 171 (340)
T ss_dssp --------HHHHHHHHHHTCCEEEEECCCSSHHHHHHHHSSCCC----HHHHHHHHHHHHHTTCEEEEEEE--E-CTT--
T ss_pred --------HHHHHHHHHCCCCEEEEecCCCCHHHHHHhhCCCCC----HHHHHHHHHHHHHCCCCEEEEEE--E-eCC--
Confidence 125667778899999998744 43 332222112 3 44555666888899997664433 3 121
Q ss_pred CCCHHHHHHHHHHHHHCCcC
Q 012949 299 AIPPSKVAYVAKELHDMGCF 318 (452)
Q Consensus 299 r~d~e~l~~~a~~l~~~Gad 318 (452)
.+.+.+.++++.+.+.|++
T Consensus 172 -~n~~ei~~~~~~~~~~g~~ 190 (340)
T 1tv8_A 172 -INDDQIIPMLEYFKDKHIE 190 (340)
T ss_dssp -TTGGGHHHHHHHHHHTTCC
T ss_pred -CCHHHHHHHHHHHHhcCCe
Confidence 2456788889999999987
No 108
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=95.07 E-value=0.19 Score=49.60 Aligned_cols=218 Identities=17% Similarity=0.130 Sum_probs=127.4
Q ss_pred HHHHHHCCCCEEEEecC-C--CCCccccc--CCHHHHHHHHHhccC-CceeEEecchhhhhhhhhhhhhccchhhhhhhh
Q 012949 154 IRRLVSSGLPVVEATSF-V--SPKWVPQL--ADARDVMEAVRDLEG-ARLPVLTPNLKVILQRSILFQQCHASVISSNLW 227 (452)
Q Consensus 154 ~~~L~~~Gv~~IEvG~~-~--s~~~~p~~--~D~e~v~~~i~~~~~-~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~ 227 (452)
++.++++|++.|=+|.. . +....|.. -..++++..++.+.. +.+++++.. . .+|+..+.++.+
T Consensus 30 A~~~~~aG~~ai~vs~~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~-d------~Gyg~~~~~~~~---- 98 (295)
T 1xg4_A 30 ALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCSLPLLVDA-D------IGFGSSAFNVAR---- 98 (295)
T ss_dssp HHHHHHTTCSCEEECHHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHCCSCEEEEC-T------TCSSSSHHHHHH----
T ss_pred HHHHHHcCCCEEEECchHhhhhhcCCCCCCCCCHHHHHHHHHHHHhhCCCCEEecC-C------cccCCCHHHHHH----
Confidence 67778899999999854 1 11223321 355778777776532 334444321 1 345544444433
Q ss_pred ccHHhHHHHHHcCCCEEEEEecCChH---HHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHH
Q 012949 228 VYLQGFEAAIAAGAKEVAIFASASEA---FSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSK 304 (452)
Q Consensus 228 ~~~~~ie~a~~~Gi~~V~i~~s~Sd~---~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~ 304 (452)
.+....++|+..|+|-....+- |...+-=.+.++..++++.+++.+..-++.|.+-.-. + .....+.
T Consensus 99 ----~v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda-~-----~~~gl~~ 168 (295)
T 1xg4_A 99 ----TVKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDA-L-----AVEGLDA 168 (295)
T ss_dssp ----HHHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECC-H-----HHHCHHH
T ss_pred ----HHHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEecHH-h-----hhcCHHH
Confidence 6677778999999999876421 1100000356778888766665554445555421100 0 0112367
Q ss_pred HHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCC-CcCcHHHHHHHHHHcCCCEEeecccCC
Q 012949 305 VAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHD-TYGQSLPNILISLQMGISTVDCSVAGL 383 (452)
Q Consensus 305 l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hn-d~GlA~ANaLaAl~aGa~~VD~Sv~Gl 383 (452)
..+-++.+.++|||.|.+. |.-+++.+.++.+.+. .|.+ +-+-..+ +..+ +.-.--+.|+++|-....++
T Consensus 169 ai~ra~ay~eAGAd~i~~e---~~~~~~~~~~i~~~~~--iP~~-~N~~~~g~~p~~---~~~eL~~~G~~~v~~~~~~~ 239 (295)
T 1xg4_A 169 AIERAQAYVEAGAEMLFPE---AITELAMYRQFADAVQ--VPIL-ANITEFGATPLF---TTDELRSAHVAMALYPLSAF 239 (295)
T ss_dssp HHHHHHHHHHTTCSEEEET---TCCSHHHHHHHHHHHC--SCBE-EECCSSSSSCCC---CHHHHHHTTCSEEEESSHHH
T ss_pred HHHHHHHHHHcCCCEEEEe---CCCCHHHHHHHHHHcC--CCEE-EEecccCCCCCC---CHHHHHHcCCCEEEEChHHH
Confidence 7778889999999999986 3344666666666552 3421 1111111 1112 22344578999998877766
Q ss_pred CCCCCCCCCCCcccHHHHHHHHHcCC
Q 012949 384 GGCPYAKGASGNVATEDVVYMLSGLG 409 (452)
Q Consensus 384 GecP~a~graGNaalE~vv~~L~~~G 409 (452)
|+-+.++++++..|+..|
T Consensus 240 --------~aa~~a~~~~~~~i~~~g 257 (295)
T 1xg4_A 240 --------RAMNRAAEHVYNVLRQEG 257 (295)
T ss_dssp --------HHHHHHHHHHHHHHHHHS
T ss_pred --------HHHHHHHHHHHHHHHHhC
Confidence 677888999888888644
No 109
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=95.03 E-value=0.079 Score=49.67 Aligned_cols=214 Identities=14% Similarity=0.078 Sum_probs=108.2
Q ss_pred HHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEecchhhhhhhhhhhhhccchhhhhhhhccH
Q 012949 151 VELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLWVYL 230 (452)
Q Consensus 151 ~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~~~~ 230 (452)
.+.++.+.++|++.||+.... +.-.+.+++.+.+++ .++++.++.+... +........+.......
T Consensus 21 ~~~l~~~~~~G~~~vEl~~~~-----~~~~~~~~~~~~l~~-~gl~~~~~~~~~~--------~~~~d~~~r~~~~~~~~ 86 (275)
T 3qc0_A 21 AEAVDICLKHGITAIAPWRDQ-----VAAIGLGEAGRIVRA-NGLKLTGLCRGGF--------FPAPDASGREKAIDDNR 86 (275)
T ss_dssp HHHHHHHHHTTCCEEECBHHH-----HHHHCHHHHHHHHHH-HTCEESCEEEEEC--------CCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEecccc-----ccccCHHHHHHHHHH-cCCceEEeecCCC--------cCCCCHHHHHHHHHHHH
Confidence 345677789999999996421 001234555555543 3555544432110 00000000000000123
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCC----HHHHHHHHHHHHHHHHhCCCcEEEEEEeeec---CCCCCCCCHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCS----IEDSLVRYRAVAHAAKVLSIPVRGYVSCVVG---CPVEGAIPPS 303 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s----~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g---~p~~~r~d~e 303 (452)
+.++.|.+.|++.|.+.....+. -..+ .+...+.+.++.++|++.|+++. +...-. .+...-.+++
T Consensus 87 ~~i~~a~~lG~~~v~~~~g~~~~-----~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~--lE~~~~~~~~~~~~~~~~~ 159 (275)
T 3qc0_A 87 RAVDEAAELGADCLVLVAGGLPG-----GSKNIDAARRMVVEGIAAVLPHARAAGVPLA--IEPLHPMYAADRACVNTLG 159 (275)
T ss_dssp HHHHHHHHTTCSCEEEECBCCCT-----TCCCHHHHHHHHHHHHHHHHHHHHHHTCCEE--ECCCCGGGTTTTBSCCCHH
T ss_pred HHHHHHHHhCCCEEEEeeCCCCC-----CCcCHHHHHHHHHHHHHHHHHHHHHcCCEEE--EeECCCcccCCccccCCHH
Confidence 47788889999999987532110 0122 34455666777888999998765 332100 0111123677
Q ss_pred HHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCC-CccEEEEeCCCcCcHHHHHHHHHHcCCCEEeecccC
Q 012949 304 KVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVP-VEKLAVHLHDTYGQSLPNILISLQMGISTVDCSVAG 382 (452)
Q Consensus 304 ~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p-~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~Sv~G 382 (452)
.+.++++.+-. .+ .++ -|+.=...-. +..+.+++..| +--..+|.+|...-. + +. +.
T Consensus 160 ~~~~l~~~~~~-~v-g~~-~D~~h~~~~~---d~~~~l~~~~~~~~i~~vH~~D~~~~~----------~-~~----~~- 217 (275)
T 3qc0_A 160 QALDICETLGP-GV-GVA-IDVYHVWWDP---DLANQIARAGKMKAILAHHICDWLVPT----------K-DM----LT- 217 (275)
T ss_dssp HHHHHHHHHCT-TE-EEE-EEHHHHTTCT---THHHHHHHHHHTTCEEEEEECBCCSSC----------C-CS----SS-
T ss_pred HHHHHHHHhCc-cc-EEE-EEhhhheeCC---CHHHHHHHcCccceEEEEEecCCCCCc----------c-cc----cC-
Confidence 77777776643 11 222 2654333212 23334433333 334688999953210 0 00 00
Q ss_pred CCCCCCCCCCCCcccHHHHHHHHHcCCCC
Q 012949 383 LGGCPYAKGASGNVATEDVVYMLSGLGVE 411 (452)
Q Consensus 383 lGecP~a~graGNaalE~vv~~L~~~Gi~ 411 (452)
+.+ .+| .|..+...++..|+..|++
T Consensus 218 -~r~--~~G-~G~id~~~~~~~L~~~gy~ 242 (275)
T 3qc0_A 218 -DRG--MMG-DGVIDLKGIRRRIEAAGFH 242 (275)
T ss_dssp -BCB--CTT-SSCCCHHHHHHHHHHTTCC
T ss_pred -CCc--CCC-CCccCHHHHHHHHHHcCCC
Confidence 111 122 5889999999999986654
No 110
>3elf_A Fructose-bisphosphate aldolase; zinc enzyme, dihydroxyacetone, glyceraldehyd phosphate, aldol condensation, glycolysis, lyase; HET: 2FP; 1.31A {Mycobacterium tuberculosis} PDB: 3ekz_A* 3ekl_A* 4a22_A* 4a21_A*
Probab=95.02 E-value=0.28 Score=49.52 Aligned_cols=221 Identities=14% Similarity=0.075 Sum_probs=123.0
Q ss_pred ccCCCCCC--CCCHHHHHHHHHHHHHCCCCEEEEecCCCCCccc--ccCC----HHHHHHHHHhc-cCCceeEEe---cc
Q 012949 136 DGLQNEKN--TVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVP--QLAD----ARDVMEAVRDL-EGARLPVLT---PN 203 (452)
Q Consensus 136 DG~Q~~~~--~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p--~~~D----~e~v~~~i~~~-~~~~l~~l~---~~ 203 (452)
.+.+..+. ..+.+....+++...+.+-+.|--.+...-++.. .+.+ ...+...++.+ ....+++.+ .+
T Consensus 18 ~~~yAV~AfNv~n~e~~~Avl~AAee~~sPvIlq~s~g~~~y~~g~~~~~~v~g~~~~a~~v~~~A~~~~VPVaLHlDHg 97 (349)
T 3elf_A 18 QNSYAFPAINCTSSETVNAAIKGFADAGSDGIIQFSTGGAEFGSGLGVKDMVTGAVALAEFTHVIAAKYPVNVALHTDHC 97 (349)
T ss_dssp HTTCCEEEEECCSHHHHHHHHHHHHHTTCCEEEEECHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHTTSSSCEEEEECCC
T ss_pred HcCceEEEEeeCCHHHHHHHHHHHHHhCCCEEEEcChhHHhhcCcchhhhhhhhHHHHHHHHHHHHHHCCCCEEEECCCC
Confidence 34444443 4788999999999999999977654421111110 0111 12222233322 223334322 11
Q ss_pred hhhhhhhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCc
Q 012949 204 LKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIP 283 (452)
Q Consensus 204 ~~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~ 283 (452)
....++ .|.+. .++ ...+.+++++++|..-|.+=.|. .+.+|.++..++++++|++.|+.
T Consensus 98 ~~~~ld---~~~~~---~l~----~~~~~i~~~i~~GFtSVMiDgS~----------lp~eENi~~Tk~vv~~ah~~gvs 157 (349)
T 3elf_A 98 PKDKLD---SYVRP---LLA----ISAQRVSKGGNPLFQSHMWDGSA----------VPIDENLAIAQELLKAAAAAKII 157 (349)
T ss_dssp CGGGGG---GTHHH---HHH----HHHHHHHTTCCCSCSEEEECCTT----------SCHHHHHHHHHHHHHHHHHTTCE
T ss_pred CCcccc---hhhhh---hHH----HHHHHHHHHhhcCCCEEEecCCC----------CCHHHHHHHHHHHHHHHHHcCCe
Confidence 110000 01100 000 01234555555678888764432 25689999999999999999999
Q ss_pred EEEEEEeeecCCCC--------CCCCHHHHHHHHHHHH--HCCcCEEEEc--CCcCC-------CcHHHHHHHHHHHHHh
Q 012949 284 VRGYVSCVVGCPVE--------GAIPPSKVAYVAKELH--DMGCFEISLG--DTIGV-------GTPGTVVPMLEAVMAV 344 (452)
Q Consensus 284 V~~~l~~~~g~p~~--------~r~d~e~l~~~a~~l~--~~Gad~I~L~--DT~G~-------~~P~~v~~li~~l~~~ 344 (452)
|.+.|-..-|.+|. ..++|+...+++++.- .-|+|.+.++ -.=|. +.|+.+.++=+.+.++
T Consensus 158 VEaElG~iGG~Edgv~~~~~~~~yT~Peea~~Fv~~tg~~~~gvD~LAvaiGt~HG~Yk~g~p~L~~~~L~~I~~~v~~~ 237 (349)
T 3elf_A 158 LEIEIGVVGGEEDGVANEINEKLYTSPEDFEKTIEALGAGEHGKYLLAATFGNVHGVYKPGNVKLRPDILAQGQQVAAAK 237 (349)
T ss_dssp EEEEESCCBC-------------CCCHHHHHHHHHHHTTSTTSCEEEEECSSCBSSCCCTTSSCCCTHHHHHHHHHHHHH
T ss_pred EEEEeeccccccCCcccccccccCCCHHHHHHHHHHhCCCCCCceEEEEecCCcccCCCCCCCccCHHHHHHHHHHHHhh
Confidence 99888775444432 2478999988887663 2347766553 22233 2345555554444433
Q ss_pred CC------CccEEEEeCCCcCcHHHHHHHHHHcCCCEEee
Q 012949 345 VP------VEKLAVHLHDTYGQSLPNILISLQMGISTVDC 378 (452)
Q Consensus 345 ~p------~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~ 378 (452)
++ .++|.+|.= -|........|+..|+.-|+.
T Consensus 238 ~~~~~~~~~vpLVlHGg--SG~p~e~i~~ai~~GV~KiNi 275 (349)
T 3elf_A 238 LGLPADAKPFDFVFHGG--SGSLKSEIEEALRYGVVKMNV 275 (349)
T ss_dssp HTCCTTCCCCCEEECCC--TTCCHHHHHHHHHTTEEEEEE
T ss_pred cCCccccCCCcEEEeCC--CCCCHHHHHHHHHcCCEEEEc
Confidence 32 456776654 588999999999999876543
No 111
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=94.99 E-value=0.31 Score=48.13 Aligned_cols=217 Identities=14% Similarity=0.060 Sum_probs=124.4
Q ss_pred HHHHHHCCCCEEEEecC-CC--CCccccc--CCHHHHHHHHHhcc-CCceeEEecchhhhhhhhhhhhhccchhhhhhhh
Q 012949 154 IRRLVSSGLPVVEATSF-VS--PKWVPQL--ADARDVMEAVRDLE-GARLPVLTPNLKVILQRSILFQQCHASVISSNLW 227 (452)
Q Consensus 154 ~~~L~~~Gv~~IEvG~~-~s--~~~~p~~--~D~e~v~~~i~~~~-~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~ 227 (452)
++.++++|++.|=+|.. ++ ....|-. -..++++..++.+. .+.+++++.. . .+|+ .+.++.+
T Consensus 35 A~l~e~aGf~ai~vs~~s~a~~~~G~pD~~~vt~~em~~~~~~I~r~~~~PviaD~-d------~Gyg-~~~~v~~---- 102 (298)
T 3eoo_A 35 AKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNATNLPLLVDI-D------TGWG-GAFNIAR---- 102 (298)
T ss_dssp HHHHHHHTCSCEEECHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHHCCSCEEEEC-T------TCSS-SHHHHHH----
T ss_pred HHHHHHcCCCEEEECcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhhcCCeEEEEC-C------CCCC-CHHHHHH----
Confidence 55677889999999852 11 1112321 24577777777653 2334444421 1 2454 2333332
Q ss_pred ccHHhHHHHHHcCCCEEEEEecCChH---HHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCC-CCCHH
Q 012949 228 VYLQGFEAAIAAGAKEVAIFASASEA---FSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEG-AIPPS 303 (452)
Q Consensus 228 ~~~~~ie~a~~~Gi~~V~i~~s~Sd~---~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~-r~d~e 303 (452)
.++...++|+.-|+|-..+.+- |...+-=.+.++..++++.+++.++.-++-|.+ .+ |+. ....+
T Consensus 103 ----~v~~l~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~A---RT----Da~~~~gld 171 (298)
T 3eoo_A 103 ----TIRSFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMA---RT----DAAAAEGID 171 (298)
T ss_dssp ----HHHHHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEE---EE----CTHHHHHHH
T ss_pred ----HHHHHHHhCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEE---ee----hhhhhcCHH
Confidence 5677788999999999877531 111111136888999886665544323333321 10 110 01234
Q ss_pred HHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEeecccCC
Q 012949 304 KVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCSVAGL 383 (452)
Q Consensus 304 ~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~Sv~Gl 383 (452)
...+=++...++|||.|.+. |.-+++++.++.+.+. .|.. +-+-..+...+ -+.-.--++|+++|-.....+
T Consensus 172 eai~Ra~ay~~AGAD~if~~---~~~~~ee~~~~~~~~~--~Pl~-~n~~~~g~tp~--~~~~eL~~lGv~~v~~~~~~~ 243 (298)
T 3eoo_A 172 AAIERAIAYVEAGADMIFPE---AMKTLDDYRRFKEAVK--VPIL-ANLTEFGSTPL--FTLDELKGANVDIALYCCGAY 243 (298)
T ss_dssp HHHHHHHHHHHTTCSEEEEC---CCCSHHHHHHHHHHHC--SCBE-EECCTTSSSCC--CCHHHHHHTTCCEEEECSHHH
T ss_pred HHHHHHHhhHhcCCCEEEeC---CCCCHHHHHHHHHHcC--CCeE-EEeccCCCCCC--CCHHHHHHcCCeEEEEchHHH
Confidence 44555667788999999885 3457888888877763 3421 11111111111 123444568999998877766
Q ss_pred CCCCCCCCCCCcccHHHHHHHHHcCC
Q 012949 384 GGCPYAKGASGNVATEDVVYMLSGLG 409 (452)
Q Consensus 384 GecP~a~graGNaalE~vv~~L~~~G 409 (452)
|+-+.++++++..|+..|
T Consensus 244 --------raa~~a~~~~~~~i~~~g 261 (298)
T 3eoo_A 244 --------RAMNKAALNFYETVRRDG 261 (298)
T ss_dssp --------HHHHHHHHHHHHHHHHHS
T ss_pred --------HHHHHHHHHHHHHHHHcC
Confidence 677889999998887644
No 112
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=94.96 E-value=1.3 Score=41.12 Aligned_cols=213 Identities=12% Similarity=0.072 Sum_probs=106.3
Q ss_pred HHHHHHHHHCCCCEEEEe-cCCCCCcccccCCHHHHHHHHHhccCCceeEEecchhhhhhhhhhhhhccchhhhhhhhcc
Q 012949 151 VELIRRLVSSGLPVVEAT-SFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLWVY 229 (452)
Q Consensus 151 ~~i~~~L~~~Gv~~IEvG-~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~~~ 229 (452)
.+.++.+.++|++.||+. ......+ +.-.+.+++.+.+++ .++++.++..... |........+......
T Consensus 17 ~~~l~~~~~~G~~~vEl~~~~~~~~~-~~~~~~~~~~~~l~~-~gl~~~~~~~~~~--------~~~~~~~~~~~~~~~~ 86 (278)
T 1i60_A 17 KLDLELCEKHGYDYIEIRTMDKLPEY-LKDHSLDDLAEYFQT-HHIKPLALNALVF--------FNNRDEKGHNEIITEF 86 (278)
T ss_dssp HHHHHHHHHTTCSEEEEETTTHHHHH-TTSSCHHHHHHHHHT-SSCEEEEEEEEEC--------CSSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEccHHHHHHH-hccCCHHHHHHHHHH-cCCCeeeeccccc--------cccCCHHHHHHHHHHH
Confidence 345666778999999998 4321000 111345555555554 3555543321110 0000000000000012
Q ss_pred HHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCH----HHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHH
Q 012949 230 LQGFEAAIAAGAKEVAIFASASEAFSKSNINCSI----EDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKV 305 (452)
Q Consensus 230 ~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~----e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l 305 (452)
.+.++.|.+.|++.|.+...... .+.+. +...+.+.++.++|++.|+.+. +...-+.+ ..-.+++.+
T Consensus 87 ~~~i~~a~~lG~~~v~~~~g~~~------~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~--lEn~~~~~-~~~~~~~~~ 157 (278)
T 1i60_A 87 KGMMETCKTLGVKYVVAVPLVTE------QKIVKEEIKKSSVDVLTELSDIAEPYGVKIA--LEFVGHPQ-CTVNTFEQA 157 (278)
T ss_dssp HHHHHHHHHHTCCEEEEECCBCS------SCCCHHHHHHHHHHHHHHHHHHHGGGTCEEE--EECCCCTT-BSSCSHHHH
T ss_pred HHHHHHHHHcCCCEEEEecCCCC------CCCCHHHHHHHHHHHHHHHHHHHHhcCCEEE--EEecCCcc-chhcCHHHH
Confidence 34778888999999988543221 01233 3455666677788999998654 33221100 012356777
Q ss_pred HHHHHHHHHCCcC--EEEEcCCcCC----CcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEeec
Q 012949 306 AYVAKELHDMGCF--EISLGDTIGV----GTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCS 379 (452)
Q Consensus 306 ~~~a~~l~~~Gad--~I~L~DT~G~----~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~S 379 (452)
.++++.+ +.+ .+++ |+.=. ..|. + +.+.+++-...+|+||..+.. .|-. .+.-
T Consensus 158 ~~l~~~~---~~~~~g~~~-D~~h~~~~g~d~~---~----~~~~~~~~i~~vHl~D~~~~~---------~g~~-~~~~ 216 (278)
T 1i60_A 158 YEIVNTV---NRDNVGLVL-DSFHFHAMGSNIE---S----LKQADGKKIFIYHIDDTEDFP---------IGFL-TDED 216 (278)
T ss_dssp HHHHHHH---CCTTEEEEE-EHHHHHHTTCCHH---H----HHTSCGGGEEEEEECEECCCC---------TTTC-CGGG
T ss_pred HHHHHHh---CCCCeeEEE-EeEEEeecCCCHH---H----HHhcCcceEEEEEecCCCCCC---------ccch-hhcc
Confidence 7777655 322 2333 65211 1222 2 223343334688999976541 0100 0000
Q ss_pred ccCCCCCCCCCCCCCcccHHHHHHHHHcCCCC
Q 012949 380 VAGLGGCPYAKGASGNVATEDVVYMLSGLGVE 411 (452)
Q Consensus 380 v~GlGecP~a~graGNaalE~vv~~L~~~Gi~ 411 (452)
-.-+| .|..+.+.++..|+..|++
T Consensus 217 ~~~~G--------~G~id~~~~~~~L~~~gy~ 240 (278)
T 1i60_A 217 RVWPG--------QGAIDLDAHLSALKEIGFS 240 (278)
T ss_dssp EESTT--------SSSSCHHHHHHHHHHTTCC
T ss_pred CCCCC--------CCCCcHHHHHHHHHHcCCC
Confidence 01122 4789999999999987664
No 113
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=94.94 E-value=0.32 Score=46.14 Aligned_cols=145 Identities=13% Similarity=0.065 Sum_probs=81.1
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 310 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~ 310 (452)
+.++.|.+.|++.|.+..+..+.. .....+...+.+.++.++|++.|+++. +.. . ..+++.+.++++
T Consensus 106 ~~i~~a~~lG~~~v~~~~G~~~~~----~~~~~~~~~~~l~~l~~~a~~~Gv~l~--lE~------~-~~~~~~~~~l~~ 172 (290)
T 3tva_A 106 EISDFASWVGCPAIGLHIGFVPES----SSPDYSELVRVTQDLLTHAANHGQAVH--LET------G-QESADHLLEFIE 172 (290)
T ss_dssp HHHHHHHHHTCSEEEECCCCCCCT----TSHHHHHHHHHHHHHHHHHHTTTCEEE--EEC------C-SSCHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEcCCCCccc----chHHHHHHHHHHHHHHHHHHHcCCEEE--Eec------C-CCCHHHHHHHHH
Confidence 477888889999999864421100 111245667778888999999998754 332 1 135677777776
Q ss_pred HHHHCCcCEE-EEcCCcCCCcH--HHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEeecccCCCCCC
Q 012949 311 ELHDMGCFEI-SLGDTIGVGTP--GTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCSVAGLGGCP 387 (452)
Q Consensus 311 ~l~~~Gad~I-~L~DT~G~~~P--~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~Sv~GlGecP 387 (452)
.+ +.+.+ ..-|+.=...- ....+.++.+.. -...+|.||..+... -.-|..+-.-. .+|
T Consensus 173 ~~---~~~~~g~~~D~~h~~~~g~~d~~~~l~~~~~----~i~~vHl~D~~~~~~------~~~g~~~~~~~--~~G--- 234 (290)
T 3tva_A 173 DV---NRPNLGINFDPANMILYGTGNPIEALRKVAR----YVRSIHCKDALWAPV------NERGKSWGQEV--ALG--- 234 (290)
T ss_dssp HH---CCTTEEEEECHHHHHHTTCSCHHHHHHHHGG----GEEEEEECEEECCCG------GGBTTBCCEEE--STT---
T ss_pred hc---CCCCEEEEeccHHHHHhCCCCHHHHHHHHHh----hheEEEeccccCCCc------ccccccccccc--CCC---
Confidence 55 32222 22365322110 122334444332 246789999754310 01121111111 222
Q ss_pred CCCCCCCcccHHHHHHHHHcCCCC
Q 012949 388 YAKGASGNVATEDVVYMLSGLGVE 411 (452)
Q Consensus 388 ~a~graGNaalE~vv~~L~~~Gi~ 411 (452)
.|..+...++..|+..|++
T Consensus 235 -----~G~id~~~~~~~L~~~gy~ 253 (290)
T 3tva_A 235 -----TGDVGMEAYLTTLWEIGYR 253 (290)
T ss_dssp -----SSSSCHHHHHHHHHHTTCC
T ss_pred -----CceeCHHHHHHHHHHcCCC
Confidence 5789999999999986654
No 114
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=94.92 E-value=3 Score=40.70 Aligned_cols=197 Identities=16% Similarity=0.175 Sum_probs=110.6
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHH---h-ccCCceeEEecchhhhhhhhhhhhhccc
Q 012949 144 TVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVR---D-LEGARLPVLTPNLKVILQRSILFQQCHA 219 (452)
Q Consensus 144 ~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~---~-~~~~~l~~l~~~~~~~i~r~~~~~~~~~ 219 (452)
.++.+.-.++++.|.+.|++.|-+.--... .+.+. .+|-.+.++ + ..+.++++++-.-. ....
T Consensus 24 ~iD~~~l~~lv~~li~~Gv~gl~v~GttGE--~~~Ls-~~Er~~v~~~~~~~~~g~rvpviaGvg~----------~~t~ 90 (301)
T 3m5v_A 24 KVDEQSYARLIKRQIENGIDAVVPVGTTGE--SATLT-HEEHRTCIEIAVETCKGTKVKVLAGAGS----------NATH 90 (301)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEECSSTTTT--GGGSC-HHHHHHHHHHHHHHHTTSSCEEEEECCC----------SSHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECccccC--hhhCC-HHHHHHHHHHHHHHhCCCCCeEEEeCCC----------CCHH
Confidence 578999999999999999999877422211 23342 233333333 3 22324444431100 0001
Q ss_pred hhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCC--C
Q 012949 220 SVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPV--E 297 (452)
Q Consensus 220 ~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~--~ 297 (452)
+ ..+-.+.|.+.|+|-+.+..+- + ++-|.++.++-++.+.+. .++++..|= .|. .
T Consensus 91 ~--------ai~la~~a~~~Gadavlv~~P~---y----~~~s~~~l~~~f~~va~a---~~lPiilYn-----~P~~tg 147 (301)
T 3m5v_A 91 E--------AVGLAKFAKEHGADGILSVAPY---Y----NKPTQQGLYEHYKAIAQS---VDIPVLLYN-----VPGRTG 147 (301)
T ss_dssp H--------HHHHHHHHHHTTCSEEEEECCC---S----SCCCHHHHHHHHHHHHHH---CSSCEEEEE-----CHHHHS
T ss_pred H--------HHHHHHHHHHcCCCEEEEcCCC---C----CCCCHHHHHHHHHHHHHh---CCCCEEEEe-----CchhhC
Confidence 1 1235567888999999887652 1 223555666555444433 478876433 232 2
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEe
Q 012949 298 GAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVD 377 (452)
Q Consensus 298 ~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD 377 (452)
...+++.+.++++ .-...+.++|+.| ...++.++++.. ++. .-+-.+|+. .+.++.+|++
T Consensus 148 ~~l~~~~~~~La~----~~pnivgiKdssg--d~~~~~~~~~~~----~~f-~v~~G~d~~------~~~~l~~G~~--- 207 (301)
T 3m5v_A 148 CEISTDTIIKLFR----DCENIYGVKEASG--NIDKCVDLLAHE----PRM-MLISGEDAI------NYPILSNGGK--- 207 (301)
T ss_dssp CCCCHHHHHHHHH----HCTTEEEEEECSS--CHHHHHHHHHHC----TTS-EEEECCGGG------HHHHHHTTCC---
T ss_pred cCCCHHHHHHHHh----cCCCEEEEEeCCC--CHHHHHHHHHhC----CCe-EEEEccHHH------HHHHHHcCCC---
Confidence 3467787777763 2246899999987 455666655443 432 224444432 5567888976
Q ss_pred ecccCCCCCCCCCCCCCcccHHHHHHHHH
Q 012949 378 CSVAGLGGCPYAKGASGNVATEDVVYMLS 406 (452)
Q Consensus 378 ~Sv~GlGecP~a~graGNaalE~vv~~L~ 406 (452)
+.+.| ++|+.-+.++...+
T Consensus 208 G~is~----------~~n~~P~~~~~l~~ 226 (301)
T 3m5v_A 208 GVISV----------TSNLLPDMISALTH 226 (301)
T ss_dssp EEEES----------GGGTCHHHHHHHHH
T ss_pred EEEeh----------HHHhhHHHHHHHHH
Confidence 44443 44566666655554
No 115
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=94.86 E-value=0.69 Score=46.21 Aligned_cols=140 Identities=19% Similarity=0.087 Sum_probs=89.7
Q ss_pred hHHHHHHcCCCEEEEEecC--------ChHHH--hhhcCCCHHHHHHHHHHHHHHHHhC-CCcEEEEEEeeecCCCCCCC
Q 012949 232 GFEAAIAAGAKEVAIFASA--------SEAFS--KSNINCSIEDSLVRYRAVAHAAKVL-SIPVRGYVSCVVGCPVEGAI 300 (452)
Q Consensus 232 ~ie~a~~~Gi~~V~i~~s~--------Sd~~~--~~~~~~s~e~~l~~~~~~v~~Ak~~-G~~V~~~l~~~~g~p~~~r~ 300 (452)
..+.|.++|.|.|.|-.+- |+..+ ...+|-|.++=.+.+.++++.+|+. .++|.+-|+.... ..+..
T Consensus 149 aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v~~pv~vRls~~~~--~~~g~ 226 (340)
T 3gr7_A 149 GARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWDGPLFVRISASDY--HPDGL 226 (340)
T ss_dssp HHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEESCCC--STTSC
T ss_pred HHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhcCCceEEEeccccc--cCCCC
Confidence 5566778999999987652 33222 2345778887777778888887764 6666655653210 11235
Q ss_pred CHHHHHHHHHHHHHCCcCEEEEcCC--cCC---CcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcC-CC
Q 012949 301 PPSKVAYVAKELHDMGCFEISLGDT--IGV---GTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMG-IS 374 (452)
Q Consensus 301 d~e~l~~~a~~l~~~Gad~I~L~DT--~G~---~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aG-a~ 374 (452)
+.+...++++.+.++|+|.|.+.+. ... ..|..-.++++.+++.++. +|..=.-- .-...+..+++.| ||
T Consensus 227 ~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~~i-PVi~~GgI---~s~e~a~~~L~~G~aD 302 (340)
T 3gr7_A 227 TAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREADI-PTGAVGLI---TSGWQAEEILQNGRAD 302 (340)
T ss_dssp CGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTTC-CEEEESSC---CCHHHHHHHHHTTSCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHcCC-cEEeeCCC---CCHHHHHHHHHCCCee
Confidence 6788899999999999999998652 110 1122245678888888753 44432211 1246777889999 88
Q ss_pred EEe
Q 012949 375 TVD 377 (452)
Q Consensus 375 ~VD 377 (452)
.|-
T Consensus 303 ~V~ 305 (340)
T 3gr7_A 303 LVF 305 (340)
T ss_dssp EEE
T ss_pred EEE
Confidence 664
No 116
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=94.83 E-value=1.8 Score=41.72 Aligned_cols=121 Identities=11% Similarity=0.071 Sum_probs=64.5
Q ss_pred HHHHHHHHHHCCCCEEEEecCC--C--C-Ccccc---cCCHHHHHHHHHhccCCceeEEecchhhhhhhhhhhhhc-cch
Q 012949 150 KVELIRRLVSSGLPVVEATSFV--S--P-KWVPQ---LADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQC-HAS 220 (452)
Q Consensus 150 k~~i~~~L~~~Gv~~IEvG~~~--s--~-~~~p~---~~D~e~v~~~i~~~~~~~l~~l~~~~~~~i~r~~~~~~~-~~~ 220 (452)
-.+.++.+.++|++.||+.... . + .+.|. -.+.+++.+.+++ .++++.++..... +..+.+. .+.
T Consensus 38 l~~~l~~aa~~G~~~VEl~~~~~~~~~~~~~~p~~~~~~~~~~l~~~l~~-~GL~i~~~~~~~~-----~~~~~~~~~~~ 111 (305)
T 3obe_A 38 MPNGLNRLAKAGYTDLEIFGYREDTGKFGDYNPKNTTFIASKDYKKMVDD-AGLRISSSHLTPS-----LREYTKENMPK 111 (305)
T ss_dssp HHHHHHHHHHHTCCEEEECCBCTTTCCBCCC----CCCBCHHHHHHHHHH-TTCEEEEEBCCCS-----CCCCCGGGHHH
T ss_pred HHHHHHHHHHcCCCEEEecccccccccccCcCcccccccCHHHHHHHHHH-CCCeEEEeecccc-----ccccchhhHHH
Confidence 4567888899999999997431 0 0 11121 1155666666654 3555554432110 0000000 001
Q ss_pred hhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEE
Q 012949 221 VISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVR 285 (452)
Q Consensus 221 ~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~ 285 (452)
.++ ...+.++.|.+.|++.|.+.. ..+.. .....+...+.+.++.++|++.|+.+.
T Consensus 112 ~~~----~~~~~i~~A~~lG~~~v~~~~-~~~~~----~~~~~~~~~~~l~~l~~~a~~~Gv~l~ 167 (305)
T 3obe_A 112 FDE----FWKKATDIHAELGVSCMVQPS-LPRIE----NEDDAKVVSEIFNRAGEITKKAGILWG 167 (305)
T ss_dssp HHH----HHHHHHHHHHHHTCSEEEECC-CCCCS----SHHHHHHHHHHHHHHHHHHHTTTCEEE
T ss_pred HHH----HHHHHHHHHHHcCCCEEEeCC-CCCCC----CHHHHHHHHHHHHHHHHHHHHcCCEEE
Confidence 111 123477888899999998742 11100 001134556777788899999998764
No 117
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=94.67 E-value=0.5 Score=46.80 Aligned_cols=213 Identities=16% Similarity=0.120 Sum_probs=119.5
Q ss_pred HHHHHHHCCCCEEEEecC------CCCCcccccCCHHHHHHHHHhccC-CceeEEecchhhhhhhhhhhhhccchhhhhh
Q 012949 153 LIRRLVSSGLPVVEATSF------VSPKWVPQLADARDVMEAVRDLEG-ARLPVLTPNLKVILQRSILFQQCHASVISSN 225 (452)
Q Consensus 153 i~~~L~~~Gv~~IEvG~~------~s~~~~p~~~D~e~v~~~i~~~~~-~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~ 225 (452)
-++.++++||+.|=+|.. ..|.-.+ -..++++..++.+.. +.+++++.. . .+|.. +.++.
T Consensus 41 sA~l~e~aG~dai~vs~~s~a~~~G~pD~~~--vt~~em~~~~~~I~r~~~~pviaD~-d------~Gyg~-~~~v~--- 107 (305)
T 3ih1_A 41 AALVARNTGFLALYLSGAAYTASKGLPDLGI--VTSTEVAERARDLVRATDLPVLVDI-D------TGFGG-VLNVA--- 107 (305)
T ss_dssp HHHHHHHTTCSCEEECHHHHHHHHTCCSSSC--SCHHHHHHHHHHHHHHHCCCEEEEC-T------TCSSS-HHHHH---
T ss_pred HHHHHHHcCCCEEEECcHHHHHhCCCCCCCc--CCHHHHHHHHHHHHHhcCCCEEEEC-C------CCCCC-HHHHH---
Confidence 466778899999999852 1222111 245677777765422 233443321 1 24543 22322
Q ss_pred hhccHHhHHHHHHcCCCEEEEEecCChH---HHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCC-CCCC
Q 012949 226 LWVYLQGFEAAIAAGAKEVAIFASASEA---FSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVE-GAIP 301 (452)
Q Consensus 226 ~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~---~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~-~r~d 301 (452)
+.++...++|+.-|+|-....+- |...+-=.+.++..++++.+++. .-++.|.+-. ++ ....
T Consensus 108 -----~~v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A--~~~~~I~ARt-------da~~~~g 173 (305)
T 3ih1_A 108 -----RTAVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEV--APSLYIVART-------DARGVEG 173 (305)
T ss_dssp -----HHHHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHH--CTTSEEEEEE-------CCHHHHC
T ss_pred -----HHHHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHc--CCCeEEEEee-------ccccccC
Confidence 26777788999999999876431 11111113567777777544443 2223332110 11 0012
Q ss_pred HHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcH-HHHHHHHHHcCCCEEeecc
Q 012949 302 PSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQS-LPNILISLQMGISTVDCSV 380 (452)
Q Consensus 302 ~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA-~ANaLaAl~aGa~~VD~Sv 380 (452)
.+...+=++...++|||.|.+.= .-+++.+.++ .+.++. |+-+-.- .+|.. .-+.-.--++|+++|-...
T Consensus 174 ~~~ai~Ra~ay~eAGAD~i~~e~---~~~~~~~~~i----~~~~~~-P~~~n~~-~~g~tp~~~~~eL~~lGv~~v~~~~ 244 (305)
T 3ih1_A 174 LDEAIERANAYVKAGADAIFPEA---LQSEEEFRLF----NSKVNA-PLLANMT-EFGKTPYYSAEEFANMGFQMVIYPV 244 (305)
T ss_dssp HHHHHHHHHHHHHHTCSEEEETT---CCSHHHHHHH----HHHSCS-CBEEECC-TTSSSCCCCHHHHHHTTCSEEEECS
T ss_pred HHHHHHHHHHHHHcCCCEEEEcC---CCCHHHHHHH----HHHcCC-CEEEeec-CCCCCCCCCHHHHHHcCCCEEEEch
Confidence 56777778888999999999842 3345555554 444443 4422211 01110 1123444568999998877
Q ss_pred cCCCCCCCCCCCCCcccHHHHHHHHHcCC
Q 012949 381 AGLGGCPYAKGASGNVATEDVVYMLSGLG 409 (452)
Q Consensus 381 ~GlGecP~a~graGNaalE~vv~~L~~~G 409 (452)
..+ |+-+.++++++..++..|
T Consensus 245 ~~~--------raa~~a~~~~~~~i~~~g 265 (305)
T 3ih1_A 245 TSL--------RVAAKAYENVFTLIKETG 265 (305)
T ss_dssp HHH--------HHHHHHHHHHHHHHHHHS
T ss_pred HHH--------HHHHHHHHHHHHHHHhcC
Confidence 766 677889999988887644
No 118
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=94.65 E-value=0.98 Score=45.54 Aligned_cols=118 Identities=11% Similarity=0.118 Sum_probs=80.0
Q ss_pred hHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHHH
Q 012949 232 GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKE 311 (452)
Q Consensus 232 ~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~ 311 (452)
.++.+.+.|++.+.|... +. .+ ..+++++-+.|.+|. |+. |..+.+.+...++.
T Consensus 103 svd~l~~~~v~~~KI~S~--~~--------------~N-~pLL~~va~~gKPvi--Lst-------Gmstl~Ei~~Ave~ 156 (350)
T 3g8r_A 103 SVDLIEAHGIEIIKIASC--SF--------------TD-WPLLERIARSDKPVV--AST-------AGARREDIDKVVSF 156 (350)
T ss_dssp HHHHHHHTTCCEEEECSS--ST--------------TC-HHHHHHHHTSCSCEE--EEC-------TTCCHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECcc--cc--------------cC-HHHHHHHHhhCCcEE--EEC-------CCCCHHHHHHHHHH
Confidence 666667778888887542 21 11 134566667788876 442 44578888888888
Q ss_pred HHHCCcCEEEE--cCCcCCCcHHHHHH--HHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEee
Q 012949 312 LHDMGCFEISL--GDTIGVGTPGTVVP--MLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDC 378 (452)
Q Consensus 312 l~~~Gad~I~L--~DT~G~~~P~~v~~--li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~ 378 (452)
+.+.|.+ |.| | +.++=+|....+ .|..+++.+|..++++=-|-.-+ ..+-+++|+.+||++|+.
T Consensus 157 i~~~g~~-viLlhC-~s~YPt~~~~~nL~aI~~Lk~~fp~lpVG~SdHt~g~-~~~~~~AAvAlGA~vIEk 224 (350)
T 3g8r_A 157 MLHRGKD-LTIMHC-VAEYPTPDDHLHLARIKTLRQQYAGVRIGYSTHEDPD-LMEPIMLAVAQGATVFEK 224 (350)
T ss_dssp HHTTTCC-EEEEEC-CCCSSCCGGGCCTTHHHHHHHHCTTSEEEEEECCCSS-CCHHHHHHHHTTCCEEEE
T ss_pred HHHcCCC-EEEEec-CCCCCCCcccCCHHHHHHHHHHCCCCCEEcCCCCCCC-ccHHHHHHHHcCCCEEEE
Confidence 8888876 555 5 345655544333 47888999987789997787622 234568999999998855
No 119
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=94.59 E-value=1.5 Score=43.55 Aligned_cols=207 Identities=17% Similarity=0.181 Sum_probs=107.5
Q ss_pred CCccEEEeCCccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecCC-CCCcccccCCHHHHHHHH----Hhc---cCC
Q 012949 124 PRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFV-SPKWVPQLADARDVMEAV----RDL---EGA 195 (452)
Q Consensus 124 p~~V~I~D~TLRDG~Q~~~~~~~~~~k~~i~~~L~~~Gv~~IEvG~~~-s~~~~p~~~D~e~v~~~i----~~~---~~~ 195 (452)
|.-.-|+.+|+ |-..--+..++.+..++.++.+.+.|.+.|++|.-+ .|. .+.+ +.++.++++ +.+ .++
T Consensus 10 ~~iMGIlNvTP-DSFsdgg~~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPG-a~~v-~~~eE~~Rv~pvI~~l~~~~~v 86 (314)
T 2vef_A 10 TVICGIINVTP-DSFSDGGQFFALEQALQQARKLIAEGASMLDIGGESTRPG-SSYV-EIEEEIQRVVPVIKAIRKESDV 86 (314)
T ss_dssp CEEEEEEECCC----------CHHHHHHHHHHHHHHTTCSEEEEECCC------CHH-HHHHHHHHHHHHHHHHHHHCCC
T ss_pred ceEEEEEeCCC-CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCCCC-CCCC-CHHHHHHHHHHHHHHHHhhCCc
Confidence 33345677776 333332335688999999999999999999999743 232 1111 122333332 222 233
Q ss_pred ceeEEecchhhhhhhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHH
Q 012949 196 RLPVLTPNLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAH 275 (452)
Q Consensus 196 ~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~ 275 (452)
.+++=+.. .+-+++|+++|++.|.=..... .+ .++.+
T Consensus 87 piSIDT~~--------------------------~~Va~aAl~aGa~iINDVsg~~---------~d--------~~m~~ 123 (314)
T 2vef_A 87 LISIDTWK--------------------------SQVAEAALAAGADLVNDITGLM---------GD--------EKMPH 123 (314)
T ss_dssp EEEEECSC--------------------------HHHHHHHHHTTCCEEEETTTTC---------SC--------TTHHH
T ss_pred eEEEeCCC--------------------------HHHHHHHHHcCCCEEEECCCCC---------CC--------hHHHH
Confidence 33321211 2367889999998775322210 00 13345
Q ss_pred HHHhCCCcEEEEEEeee--cCCCCC-----------C--------------C-C--HHHHHHHHHHHHHCCc--CEEEEc
Q 012949 276 AAKVLSIPVRGYVSCVV--GCPVEG-----------A--------------I-P--PSKVAYVAKELHDMGC--FEISLG 323 (452)
Q Consensus 276 ~Ak~~G~~V~~~l~~~~--g~p~~~-----------r--------------~-d--~e~l~~~a~~l~~~Ga--d~I~L~ 323 (452)
.+++.|..+. +++.- |.|... . . + .+++.+.++.+.++|+ +.|.|
T Consensus 124 v~a~~~~~vv--lmh~~~~g~p~~~~~~~~~~~~~g~~~~~~~~~~y~d~~v~e~v~~~l~~~i~~a~~~GI~~~~Iil- 200 (314)
T 2vef_A 124 VVAEARAQVV--IMFNPVMARPQHPSSLIFPHFGFGQAFTEEELADFETLPIEELMEAFFERALARAAEAGIAPENILL- 200 (314)
T ss_dssp HHHHHTCEEE--EECCHHHHCTTSTTTTTSCCCCC--CCCC--CHHHHHSCHHHHHHHHHHHHHHHHHHHTCCGGGEEE-
T ss_pred HHHHcCCCEE--EEecCCCCCCCCcccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHcCCChhhEEE-
Confidence 5677787764 55431 112110 0 0 0 1334556677888998 46776
Q ss_pred CC-cCC-CcHHHHHHHHHHHHHhC-CCccEEEEeCCC------c---Cc---------------H-HHHHHHHHHcCCCE
Q 012949 324 DT-IGV-GTPGTVVPMLEAVMAVV-PVEKLAVHLHDT------Y---GQ---------------S-LPNILISLQMGIST 375 (452)
Q Consensus 324 DT-~G~-~~P~~v~~li~~l~~~~-p~~~l~vH~Hnd------~---Gl---------------A-~ANaLaAl~aGa~~ 375 (452)
|. +|. -+.++-.++++.+.+.. ++.|+-+=.-|- . |+ + .|-+..|++.||++
T Consensus 201 DPGiGF~kt~~~nl~ll~~l~~l~~~g~PvL~G~SrKsfig~~~~~~g~~~~p~tel~~~~R~~~t~a~~~~a~~~Ga~I 280 (314)
T 2vef_A 201 DPGIGFGLTKKENLLLLRDLDKLHQKGYPIFLGVSRKRFVINILEENGFEVNPETELGFRNRDTASAHVTSIAARQGVEV 280 (314)
T ss_dssp ECCTTSSCCHHHHHHHHHTHHHHHTTSSCBEEECSSCHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHHHHHTTCSE
T ss_pred eCCCCcccchHHHHHHHHHHHHhhcCCCCEEEEeCccHHHhhhhccccccCCcccccchhhhhHHHHHHHHHHHHcCCcE
Confidence 75 343 34567777888777642 344444422220 0 22 2 34456778899988
Q ss_pred Eeec
Q 012949 376 VDCS 379 (452)
Q Consensus 376 VD~S 379 (452)
|.+.
T Consensus 281 vRvH 284 (314)
T 2vef_A 281 VRVH 284 (314)
T ss_dssp EEES
T ss_pred EEeC
Confidence 7653
No 120
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=94.56 E-value=0.37 Score=44.26 Aligned_cols=174 Identities=13% Similarity=0.115 Sum_probs=93.8
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEE--ecchhhhhhhhhhhhhccchhhh
Q 012949 146 PTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVL--TPNLKVILQRSILFQQCHASVIS 223 (452)
Q Consensus 146 ~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l--~~~~~~~i~r~~~~~~~~~~~i~ 223 (452)
+.....+.++.+.+.|++.+++...-.+ +.+.+....+..+.+++..+..+.+. +.+..
T Consensus 14 D~~~~~~~~~~~~~~G~~~i~~~~~dg~-~~~~~~~g~~~i~~i~~~~~~~~~v~l~v~d~~------------------ 74 (220)
T 2fli_A 14 DYANFASELARIEETDAEYVHIDIMDGQ-FVPNISFGADVVASMRKHSKLVFDCHLMVVDPE------------------ 74 (220)
T ss_dssp CGGGHHHHHHHHHHTTCCEEEEEEEBSS-SSSCBCBCHHHHHHHHTTCCSEEEEEEESSSGG------------------
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeecCC-CCCccccCHHHHHHHHHhCCCCEEEEEeecCHH------------------
Confidence 4456678889999999999887742111 01222221345566665444333321 12111
Q ss_pred hhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHH
Q 012949 224 SNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPS 303 (452)
Q Consensus 224 ~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e 303 (452)
+.++.+.++|++.|.+-....+ ...++++.+++.|..+...+. | .++.+
T Consensus 75 -------~~i~~~~~~gad~v~vh~~~~~----------------~~~~~~~~~~~~g~~i~~~~~-----~---~t~~e 123 (220)
T 2fli_A 75 -------RYVEAFAQAGADIMTIHTESTR----------------HIHGALQKIKAAGMKAGVVIN-----P---GTPAT 123 (220)
T ss_dssp -------GGHHHHHHHTCSEEEEEGGGCS----------------CHHHHHHHHHHTTSEEEEEEC-----T---TSCGG
T ss_pred -------HHHHHHHHcCCCEEEEccCccc----------------cHHHHHHHHHHcCCcEEEEEc-----C---CCCHH
Confidence 2578899999999988654322 123455667777877653321 1 12333
Q ss_pred HHHHHHHHHHHCCcCEEEEcCCc-----CCCcHHHHHHHHHHHHHhCC----CccEEEEeCCCcCcHHHHHHHHHHcCCC
Q 012949 304 KVAYVAKELHDMGCFEISLGDTI-----GVGTPGTVVPMLEAVMAVVP----VEKLAVHLHDTYGQSLPNILISLQMGIS 374 (452)
Q Consensus 304 ~l~~~a~~l~~~Gad~I~L~DT~-----G~~~P~~v~~li~~l~~~~p----~~~l~vH~Hnd~GlA~ANaLaAl~aGa~ 374 (452)
.+..+ ..++|.|.+ |++ |...+....+.++.+++..+ ..++.+ +-|....|.-.++++|++
T Consensus 124 ~~~~~-----~~~~d~vl~-~~~~~g~~g~~~~~~~~~~i~~~~~~~~~~~~~~~i~v----~GGI~~~~~~~~~~~Gad 193 (220)
T 2fli_A 124 ALEPL-----LDLVDQVLI-MTVNPGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEV----DGGVDNKTIRACYEAGAN 193 (220)
T ss_dssp GGGGG-----TTTCSEEEE-ESSCTTCSSCCCCGGGHHHHHHHHHHHHHTTCCCEEEE----ESSCCTTTHHHHHHHTCC
T ss_pred HHHHH-----HhhCCEEEE-EEECCCCcccccCHHHHHHHHHHHHHHHhcCCCceEEE----ECcCCHHHHHHHHHcCCC
Confidence 33222 235787654 333 22222222233455554331 334444 445555788888899999
Q ss_pred EEeec
Q 012949 375 TVDCS 379 (452)
Q Consensus 375 ~VD~S 379 (452)
.|.+.
T Consensus 194 ~vvvG 198 (220)
T 2fli_A 194 VFVAG 198 (220)
T ss_dssp EEEES
T ss_pred EEEEC
Confidence 88765
No 121
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=94.54 E-value=3.2 Score=39.17 Aligned_cols=215 Identities=13% Similarity=0.060 Sum_probs=102.3
Q ss_pred HHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEecchhhhhhhhhhhhhccchhhhhhh
Q 012949 147 TGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNL 226 (452)
Q Consensus 147 ~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~ 226 (452)
...-.+.++.+.++|++.||+.... + .-.+.+++.+.+++ .++++..+...... ......+.......-+...
T Consensus 40 ~~~~~~~l~~~~~~G~~~vEl~~~~-~----~~~~~~~~~~~l~~-~gl~~~~~~~~~p~-~~~~~~l~~~d~~~r~~~~ 112 (290)
T 2zvr_A 40 KGDLRKGMELAKRVGYQAVEIAVRD-P----SIVDWNEVKILSEE-LNLPICAIGTGQAY-LADGLSLTHPNDEIRKKAI 112 (290)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECSC-G----GGSCHHHHHHHHHH-HTCCEEEEECTHHH-HTTCCCTTCSSHHHHHHHH
T ss_pred ccCHHHHHHHHHHhCCCEEEEcCCC-c----chhhHHHHHHHHHH-cCCeEEEEeccCcc-ccCCCCCCCCCHHHHHHHH
Confidence 3455677788888999999997642 1 11355666666654 35566444331100 0000000000000000000
Q ss_pred hccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHH
Q 012949 227 WVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVA 306 (452)
Q Consensus 227 ~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~ 306 (452)
....+.++.|.+.|++.|....... ..+.+.++.++++.+.++.+-+..-+|...+...-..+...-.+++.+.
T Consensus 113 ~~~~~~i~~A~~lG~~~v~~~~~g~------~~~~~~~~~~~~~~~~l~~l~~~a~~v~l~lEn~~~~~~~~~~~~~~~~ 186 (290)
T 2zvr_A 113 ERVVKHTEVAGMFGALVIIGLVRGR------REGRSYEETEELFIESMKRLLELTEHAKFVIEPLNRYETDFINTIDDAL 186 (290)
T ss_dssp HHHHHHHHHHHHHTCEEEESGGGCC------CTTSCHHHHHHHHHHHHHHHHHHCSSCCEEECCCCTTTCSSCCSHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEecCCCC------CCCcCHHHHHHHHHHHHHHHHHHhccCEEEEEeCCCcCccccCCHHHHH
Confidence 0123477888889999887221110 0123455555555554443322221144334321001112224677777
Q ss_pred HHHHHHHHCCcC--EEEEcCCcCCCcH-HHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEeecccCC
Q 012949 307 YVAKELHDMGCF--EISLGDTIGVGTP-GTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCSVAGL 383 (452)
Q Consensus 307 ~~a~~l~~~Gad--~I~L~DT~G~~~P-~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~Sv~Gl 383 (452)
++++.+ +.+ .+++ |+.=...- ....+.++.+. +-...+|.||... .
T Consensus 187 ~l~~~~---~~~~vgl~~-D~~h~~~~g~d~~~~l~~~~----~~i~~vHl~D~~r---------------------~-- 235 (290)
T 2zvr_A 187 RILRKI---NSNRVGILA-DTFHMNIEEVNIPESLKRAG----EKLYHFHVADSNR---------------------W-- 235 (290)
T ss_dssp HHHHHH---CCTTEEEEE-EHHHHHHHCSSHHHHHHHHG----GGEEEEEECCTTS---------------------S--
T ss_pred HHHHHc---CCCCEEEEE-ehhHhhhcCCCHHHHHHHhh----ccEEEEEEcCCCC---------------------C--
Confidence 777655 322 3333 65311110 11223333332 2236789998510 1
Q ss_pred CCCCCCCCCCCcccHHHHHHHHHcCCCC
Q 012949 384 GGCPYAKGASGNVATEDVVYMLSGLGVE 411 (452)
Q Consensus 384 GecP~a~graGNaalE~vv~~L~~~Gi~ 411 (452)
.+| .|..+.+.++..|+..|++
T Consensus 236 -----~~G-~G~id~~~~~~~L~~~gy~ 257 (290)
T 2zvr_A 236 -----APG-CGHFDFRSVFNTLKEIGYN 257 (290)
T ss_dssp -----STT-SSCCCHHHHHHHHHHTTCC
T ss_pred -----CCC-CcccCHHHHHHHHHHcCCC
Confidence 122 5789999999999987664
No 122
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=94.54 E-value=0.29 Score=50.61 Aligned_cols=199 Identities=15% Similarity=0.066 Sum_probs=122.0
Q ss_pred hHHHHHHcCCCEEEEEecCC-hH---HHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCC-----------
Q 012949 232 GFEAAIAAGAKEVAIFASAS-EA---FSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPV----------- 296 (452)
Q Consensus 232 ~ie~a~~~Gi~~V~i~~s~S-d~---~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~----------- 296 (452)
.++...++|+..|+|-+.+. +- |...+.=.+.+++.+++..+...++..|.+..+ +..+- ..-
T Consensus 172 tv~~~~~aGaaGi~IEDq~~~~KkCGh~~gk~lv~~~e~~~rI~Aa~~A~~~~~~d~~I-iARTD-a~aa~l~~s~~d~r 249 (435)
T 3lg3_A 172 LMKAMIEAGAAGVHFEDQLAAVKKCGHMGGKVLVPTQEAIQKLVAARLAADVLGVPTLL-IARTD-ADAADLLTSDCDPY 249 (435)
T ss_dssp HHHHHHHHTCSEEEEESBCGGGCBCSTTCBCEECCHHHHHHHHHHHHHHHHHHTCCCEE-EEEEC-TTTCCEESCCCCGG
T ss_pred HHHHHHHcCCEEEEEecCCCCccccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEE-EEEcC-Cccccccccccccc
Confidence 78888999999999998864 21 111111136899999998777777666765321 11110 000
Q ss_pred -----CC----------CCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcC--
Q 012949 297 -----EG----------AIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYG-- 359 (452)
Q Consensus 297 -----~~----------r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~G-- 359 (452)
.+ +...+...+=++...+ |||.|.+- .|.-+++++.++.+.++..+|...|.+-+--.+.
T Consensus 250 D~~fi~G~r~~eG~y~~~~gld~AI~Ra~AY~~-GAD~if~E--~~~~~~~ei~~f~~~v~~~~P~~~La~~~sPsfnw~ 326 (435)
T 3lg3_A 250 DREFITGDRTAEGFFRTRAGIEQAISRGLAYAP-YADLVWCE--TSTPDLALAKRFADAVHAQFPGKLLAYNCSPSFNWK 326 (435)
T ss_dssp GGGGEEEEECTTCCEEECCSHHHHHHHHHHHGG-GCSEEEEC--CSSCCHHHHHHHHHHHHHHSTTCEEEEECCSSSCHH
T ss_pred cchhhcccccccccccccCCHHHHHHHHHHHHc-cCCEEEec--CCCCCHHHHHHHHHHhccccCCeEEEeCCCCCcccc
Confidence 00 1234555555666667 99999882 2456899999999999988997656653332232
Q ss_pred --cH---HHHH-HHHHHcCCCEEeecccCCCCCCCCCCCCCcccHHHHHHHHHc-CCCCCCCChhhHHHHHHHHHHHhCC
Q 012949 360 --QS---LPNI-LISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSG-LGVETNVDLRKLMLAGDFINKHLGR 432 (452)
Q Consensus 360 --lA---~ANa-LaAl~aGa~~VD~Sv~GlGecP~a~graGNaalE~vv~~L~~-~Gi~t~iDl~~L~~la~~v~~~~g~ 432 (452)
+. +++. -.--++|+.++=.++.|+ ++-+.++++++..+.. -|.. .....++--++..+..|+
T Consensus 327 ~~~~d~~~~~f~~eLa~lG~~~v~~~la~~--------raa~~a~~~~a~~~~~~~gm~---ayve~~Q~~e~~~~~~g~ 395 (435)
T 3lg3_A 327 KNLTDQQIASFQDELSAMGYKYQFITLAGI--------HSMWFNMFDLAHAYAQGEGMK---HYVEKVQQPEFASVDRGY 395 (435)
T ss_dssp HHSCHHHHHHHHHHHHHTTEEEEEETTHHH--------HHHHHHHHHHHHHHHHSCHHH---HHHHHTHHHHHTTGGGTC
T ss_pred ccCCHHHHHHHHHHHHHcCCcEEEeCcHHH--------HHHHHHHHHHHHHHHhhCCHH---HHHHHHHHHHHhhhccCc
Confidence 11 1221 222258999999999888 7788999999888876 3321 111212222222345677
Q ss_pred CCCCCcccccchhh
Q 012949 433 PSGSKTAIALNRIA 446 (452)
Q Consensus 433 ~~p~~~pi~G~~vf 446 (452)
..-.++-.+|.+-|
T Consensus 396 ~~~~hq~~~G~~y~ 409 (435)
T 3lg3_A 396 TFASHQQEVGTGYF 409 (435)
T ss_dssp CTTSHHHHTTHHHH
T ss_pred eeeecccccccchH
Confidence 76666666666554
No 123
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=94.53 E-value=4.1 Score=40.66 Aligned_cols=185 Identities=20% Similarity=0.269 Sum_probs=104.9
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCC--HHHHHHHHHhccCCceeEEe----cchhhhhhhhhhhhhc
Q 012949 144 TVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLAD--ARDVMEAVRDLEGARLPVLT----PNLKVILQRSILFQQC 217 (452)
Q Consensus 144 ~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D--~e~v~~~i~~~~~~~l~~l~----~~~~~~i~r~~~~~~~ 217 (452)
.++.+.-.++++.|.+.|++.|-+.--... .+.+.+ ..++++.+.+..+-++++++ .+.+
T Consensus 48 ~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE--~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~------------ 113 (343)
T 2v9d_A 48 QLDKPGTAALIDDLIKAGVDGLFFLGSGGE--FSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNAR------------ 113 (343)
T ss_dssp SBCHHHHHHHHHHHHHTTCSCEEESSTTTT--GGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHH------------
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCccccC--hhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHH------------
Confidence 479999999999999999998877422211 233322 22333333322222333332 1111
Q ss_pred cchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCC-
Q 012949 218 HASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPV- 296 (452)
Q Consensus 218 ~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~- 296 (452)
+. .+-.+.|.++|+|-+.+..+- + ++-|.++.++-+..+. ...++++..|= .|.
T Consensus 114 --ea--------i~la~~A~~~Gadavlv~~P~---Y----~~~s~~~l~~~f~~VA---~a~~lPiilYn-----~P~~ 168 (343)
T 2v9d_A 114 --ET--------IELSQHAQQAGADGIVVINPY---Y----WKVSEANLIRYFEQVA---DSVTLPVMLYN-----FPAL 168 (343)
T ss_dssp --HH--------HHHHHHHHHHTCSEEEEECCS---S----SCCCHHHHHHHHHHHH---HTCSSCEEEEE-----CHHH
T ss_pred --HH--------HHHHHHHHhcCCCEEEECCCC---C----CCCCHHHHHHHHHHHH---HhcCCCEEEEe-----Cchh
Confidence 11 224566778999999887652 1 2235566665554443 34577876433 232
Q ss_pred -CCCCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEE-EEeCCCcCcHHHHHHHHHHcCCC
Q 012949 297 -EGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLA-VHLHDTYGQSLPNILISLQMGIS 374 (452)
Q Consensus 297 -~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~-vH~Hnd~GlA~ANaLaAl~aGa~ 374 (452)
....+++.+.++++ +. ...+.++||.|- ..++.++++.+...-++ +. +-..|+ ..+.++.+|++
T Consensus 169 tg~~l~~e~~~~La~---~~-pnIvgiKdssgd--~~~~~~l~~~~~~~~~~--f~v~~G~D~------~~l~~l~~Ga~ 234 (343)
T 2v9d_A 169 TGQDLTPALVKTLAD---SR-SNIIGIKDTIDS--VAHLRSMIHTVKGAHPH--FTVLCGYDD------HLFNTLLLGGD 234 (343)
T ss_dssp HSSCCCHHHHHHHHH---HC-TTEEEEEECCSC--HHHHHHHHHHHHHHCTT--CEEEESSGG------GHHHHHHTTCC
T ss_pred cCcCCCHHHHHHHHH---hC-CCEEEEEeCCCC--HHHHHHHHHhcCCCCCC--EEEEECcHH------HHHHHHHCCCC
Confidence 22457788877764 22 569999999885 56677776655421122 33 344443 24567788975
Q ss_pred EEeecccCCC
Q 012949 375 TVDCSVAGLG 384 (452)
Q Consensus 375 ~VD~Sv~GlG 384 (452)
+.|.|++
T Consensus 235 ---G~is~~a 241 (343)
T 2v9d_A 235 ---GAISASG 241 (343)
T ss_dssp ---EECCGGG
T ss_pred ---EEEeCHH
Confidence 5555443
No 124
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=94.51 E-value=0.24 Score=48.85 Aligned_cols=218 Identities=13% Similarity=0.101 Sum_probs=127.2
Q ss_pred HHHHHHCCCCEEEEecC-CC-CCccccc--CCHHHHHHHHHhcc-CCceeEEecchhhhhhhhhhhhhccchhhhhhhhc
Q 012949 154 IRRLVSSGLPVVEATSF-VS-PKWVPQL--ADARDVMEAVRDLE-GARLPVLTPNLKVILQRSILFQQCHASVISSNLWV 228 (452)
Q Consensus 154 ~~~L~~~Gv~~IEvG~~-~s-~~~~p~~--~D~e~v~~~i~~~~-~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~~ 228 (452)
++.++++|++.|=+|+. .+ ....|-. -..++++..++.+. .+.+++++.. . .+|+. +.++.+
T Consensus 32 A~~~~~aG~~ai~vsg~~~a~~lG~pD~~~vt~~em~~~~~~I~~~~~~PviaD~-d------~Gyg~-~~~v~~----- 98 (295)
T 1s2w_A 32 ARIVQEAGFKGIWGSGLSVSAQLGVRDSNEASWTQVVEVLEFMSDASDVPILLDA-D------TGYGN-FNNARR----- 98 (295)
T ss_dssp HHHHHHHTCSCEEECCHHHHHTC---------CHHHHHHHHHHHHTCSSCEEEEC-C------SSCSS-HHHHHH-----
T ss_pred HHHHHHcCCCEEEeChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEecC-C------CCCCC-HHHHHH-----
Confidence 56777889999999943 11 1122321 12366777776653 3445544421 1 23543 233332
Q ss_pred cHHhHHHHHHcCCCEEEEEecCChHHHhhhcC------CCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCH
Q 012949 229 YLQGFEAAIAAGAKEVAIFASASEAFSKSNIN------CSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPP 302 (452)
Q Consensus 229 ~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~------~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~ 302 (452)
.+++..++|+.-|+|-.....-..- .++ .+.++..++++.+++....-++.|.+---. + . .....
T Consensus 99 ---~v~~l~~aGaagv~iED~~~~k~cg-H~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~aRtda-~---~-a~~g~ 169 (295)
T 1s2w_A 99 ---LVRKLEDRGVAGACLEDKLFPKTNS-LHDGRAQPLADIEEFALKIKACKDSQTDPDFCIVARVEA-F---I-AGWGL 169 (295)
T ss_dssp ---HHHHHHHTTCCEEEEECBCC---------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEECT-T---T-TTCCH
T ss_pred ---HHHHHHHcCCcEEEECCCCCCcccc-ccCCCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehH-H---h-ccccH
Confidence 5677778999999999876431110 011 467788888766655444445555431110 0 0 11235
Q ss_pred HHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEeecccC
Q 012949 303 SKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCSVAG 382 (452)
Q Consensus 303 e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~Sv~G 382 (452)
+...+=++.+.++|||.|.+-= |+-+++.+.++.+.+...+|. -+- -..+|.-. .-.--++|+++|-....+
T Consensus 170 ~~ai~Ra~ay~eAGAd~i~~e~--~~~~~~~~~~i~~~~~~~~P~---i~~-~~~~~~~~--~~eL~~lGv~~v~~~~~~ 241 (295)
T 1s2w_A 170 DEALKRAEAYRNAGADAILMHS--KKADPSDIEAFMKAWNNQGPV---VIV-PTKYYKTP--TDHFRDMGVSMVIWANHN 241 (295)
T ss_dssp HHHHHHHHHHHHTTCSEEEECC--CSSSSHHHHHHHHHHTTCSCE---EEC-CSTTTTSC--HHHHHHHTCCEEEECSHH
T ss_pred HHHHHHHHHHHHcCCCEEEEcC--CCCCHHHHHHHHHHcCCCCCE---EEe-CCCCCCCC--HHHHHHcCCcEEEEChHH
Confidence 7788888899999999999951 445678888888877643453 221 11233222 334446899999888777
Q ss_pred CCCCCCCCCCCCcccHHHHHHHHHcCC
Q 012949 383 LGGCPYAKGASGNVATEDVVYMLSGLG 409 (452)
Q Consensus 383 lGecP~a~graGNaalE~vv~~L~~~G 409 (452)
+ |+-+.++++++..++..|
T Consensus 242 ~--------raa~~a~~~~~~~i~~~g 260 (295)
T 1s2w_A 242 L--------RASVSAIQQTTKQIYDDQ 260 (295)
T ss_dssp H--------HHHHHHHHHHHHHHHHHS
T ss_pred H--------HHHHHHHHHHHHHHHHcC
Confidence 6 667888899888887644
No 125
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=94.46 E-value=0.66 Score=44.56 Aligned_cols=142 Identities=10% Similarity=0.039 Sum_probs=74.9
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCC-CH----HHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINC-SI----EDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKV 305 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~-s~----e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l 305 (452)
+.++.|.+.|++.|.+... +.. -....+. +. +...+.+.++.++|++.|+.+. +...-..+...-.+++.+
T Consensus 111 ~~i~~A~~lG~~~v~~~~~-~~~-g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~--lEn~~~~~~~~~~~~~~~ 186 (309)
T 2hk0_A 111 RTLSNVAKLDIHTIGGALH-SYW-PIDYSQPVDKAGDYARGVEGINGIADFANDLGINLC--IEVLNRFENHVLNTAAEG 186 (309)
T ss_dssp HHHHHHHHTTCCEEEECTT-SCS-SCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEE--EECCCTTTCSSCCSHHHH
T ss_pred HHHHHHHHcCCCEEEeecc-ccc-cccCCCcCChHHHHHHHHHHHHHHHHHHHHcCCEEE--EeecccccccccCCHHHH
Confidence 4778888999999885431 000 0000011 33 3445566677788999998754 332110011122467777
Q ss_pred HHHHHHHHHCCcCEEEEcCCcCCCcH-HHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEeecccCCC
Q 012949 306 AYVAKELHDMGCFEISLGDTIGVGTP-GTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCSVAGLG 384 (452)
Q Consensus 306 ~~~a~~l~~~Gad~I~L~DT~G~~~P-~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~Sv~GlG 384 (452)
.++++.+-.- --.+++ |+.=...- ....+.++.+. + --..+|+||... . -
T Consensus 187 ~~l~~~v~~~-~vg~~~-D~~H~~~~g~d~~~~l~~~~---~-~i~~vHl~D~~r-------------------~--~-- 237 (309)
T 2hk0_A 187 VAFVKDVGKN-NVKVML-DTFHMNIEEDSFGDAIRTAG---P-LLGHFHTGESNR-------------------R--V-- 237 (309)
T ss_dssp HHHHHHHTCT-TEEEEE-EHHHHHHHCSCHHHHHHHHG---G-GEEEEEECCTTS-------------------C--C--
T ss_pred HHHHHHcCCC-CeEEEE-ehhhHhhcCcCHHHHHHHHH---h-hEEEEEeCCCCC-------------------C--C--
Confidence 7777655311 113333 65311110 11223333332 2 236789998621 0 1
Q ss_pred CCCCCCCCCCcccHHHHHHHHHcCCCC
Q 012949 385 GCPYAKGASGNVATEDVVYMLSGLGVE 411 (452)
Q Consensus 385 ecP~a~graGNaalE~vv~~L~~~Gi~ 411 (452)
+| .|..+.+.++..|+..|++
T Consensus 238 -----~G-~G~id~~~~~~~L~~~gy~ 258 (309)
T 2hk0_A 238 -----PG-KGRMPWHEIGLALRDINYT 258 (309)
T ss_dssp -----TT-SSCCCHHHHHHHHHHTTCC
T ss_pred -----Cc-CCccCHHHHHHHHHHcCCC
Confidence 22 5789999999999986654
No 126
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=94.40 E-value=0.29 Score=50.64 Aligned_cols=84 Identities=13% Similarity=0.153 Sum_probs=60.8
Q ss_pred HhHHHHHHcCCCEEEEEe-cCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCc-EEEEEEeeecCCCCCCCCHHHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFA-SASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIP-VRGYVSCVVGCPVEGAIPPSKVAYV 308 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~-s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~-V~~~l~~~~g~p~~~r~d~e~l~~~ 308 (452)
+.++...++|+.+|.+-+ +.+|... ..+|+. ...+.+.++++.+++.|+. |.+.++ +|.|.. +.+.+.+.
T Consensus 154 e~l~~L~~~G~~rislGvQS~~~~~l-~~i~R~--~~~~~~~~ai~~~r~~G~~~v~~dlI--~GlPge---t~e~~~~t 225 (457)
T 1olt_A 154 DVLDHLRAEGFNRLSMGVQDFNKEVQ-RLVNRE--QDEEFIFALLNHAREIGFTSTNIDLI--YGLPKQ---TPESFAFT 225 (457)
T ss_dssp HHHHHHHHTTCCEEEEEEECCCHHHH-HHHTCC--CCHHHHHHHHHHHHHTTCCSCEEEEE--ESCTTC---CHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEeeccCCHHHH-HHhCCC--CCHHHHHHHHHHHHHcCCCcEEEEEE--cCCCCC---CHHHHHHH
Confidence 477888899999998876 4444333 234432 2245566778999999998 887776 566655 47888889
Q ss_pred HHHHHHCCcCEEEE
Q 012949 309 AKELHDMGCFEISL 322 (452)
Q Consensus 309 a~~l~~~Gad~I~L 322 (452)
++.+.+.+++.|.+
T Consensus 226 l~~~~~l~~~~i~~ 239 (457)
T 1olt_A 226 LKRVAELNPDRLSV 239 (457)
T ss_dssp HHHHHHHCCSEEEE
T ss_pred HHHHHhcCcCEEEe
Confidence 99999999998765
No 127
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=94.35 E-value=0.89 Score=45.20 Aligned_cols=141 Identities=18% Similarity=0.035 Sum_probs=90.1
Q ss_pred HhHHHHHHcCCCEEEEEecC--------ChHH--HhhhcCCCHHHHHHHHHHHHHHHHhC-CCcEEEEEEeeecCCCCCC
Q 012949 231 QGFEAAIAAGAKEVAIFASA--------SEAF--SKSNINCSIEDSLVRYRAVAHAAKVL-SIPVRGYVSCVVGCPVEGA 299 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~--------Sd~~--~~~~~~~s~e~~l~~~~~~v~~Ak~~-G~~V~~~l~~~~g~p~~~r 299 (452)
+..+.|.++|.|.|.|-..- |+.. .....|-|.++-.+.+.++++.+|+. .++|.+-|+..- ...+.
T Consensus 148 ~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v~~pv~vris~~~--~~~~g 225 (338)
T 1z41_A 148 QAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWDGPLFVRVSASD--YTDKG 225 (338)
T ss_dssp HHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEECCC--CSTTS
T ss_pred HHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHcCCcEEEEecCcc--cCCCC
Confidence 35567778999999886542 2221 12235667777777777888877764 666665565321 11234
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEEcCCcC--C---CcHHHHHHHHHHHHHhCCCccEEEEeCCCcCc-HHHHHHHHHHcC-
Q 012949 300 IPPSKVAYVAKELHDMGCFEISLGDTIG--V---GTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQ-SLPNILISLQMG- 372 (452)
Q Consensus 300 ~d~e~l~~~a~~l~~~Gad~I~L~DT~G--~---~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~Gl-A~ANaLaAl~aG- 372 (452)
.+.+...++++.+.++|++.|.+.+..- . ..|..-.++++.+++.+.. +|..= -|. -...+..+++.|
T Consensus 226 ~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~~i-PVi~~----Ggi~s~~~a~~~l~~G~ 300 (338)
T 1z41_A 226 LDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQADM-ATGAV----GMITDGSMAEEILQNGR 300 (338)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHCC-EEEEC----SSCCSHHHHHHHHHTTS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHCCC-CEEEE----CCCCCHHHHHHHHHcCC
Confidence 6788899999999999999999876421 1 1222234667778877643 44432 122 357778889998
Q ss_pred CCEEee
Q 012949 373 ISTVDC 378 (452)
Q Consensus 373 a~~VD~ 378 (452)
||.|-.
T Consensus 301 aD~V~i 306 (338)
T 1z41_A 301 ADLIFI 306 (338)
T ss_dssp CSEEEE
T ss_pred ceEEee
Confidence 887643
No 128
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=94.20 E-value=0.95 Score=45.27 Aligned_cols=140 Identities=21% Similarity=0.169 Sum_probs=88.9
Q ss_pred HhHHHHHHcCCCEEEEEecC--------ChHH--HhhhcCCCHHHHHHHHHHHHHHHHhC---CCcEEEEEEeeecCCCC
Q 012949 231 QGFEAAIAAGAKEVAIFASA--------SEAF--SKSNINCSIEDSLVRYRAVAHAAKVL---SIPVRGYVSCVVGCPVE 297 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~--------Sd~~--~~~~~~~s~e~~l~~~~~~v~~Ak~~---G~~V~~~l~~~~g~p~~ 297 (452)
+..++|.++|.|.|.|-.+- |+.. ....+|-|.++=.+.+.++++.+|+. .+.|.+-|+.... ..
T Consensus 156 ~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~--~~ 233 (349)
T 3hgj_A 156 EGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDW--GE 233 (349)
T ss_dssp HHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCC--ST
T ss_pred HHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEeccccc--cC
Confidence 35567788999998886542 2221 12235677887778888888888874 3446555553210 12
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcC--CcCC----CcHHHHHHHHHHHHHhCCCccEEEEeCCCcCc-HHHHHHHHHH
Q 012949 298 GAIPPSKVAYVAKELHDMGCFEISLGD--TIGV----GTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQ-SLPNILISLQ 370 (452)
Q Consensus 298 ~r~d~e~l~~~a~~l~~~Gad~I~L~D--T~G~----~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~Gl-A~ANaLaAl~ 370 (452)
+-.+++...++++.+.++|+|.|.+.. +... ..|..-.++++.+++.++. +|..=. |. -...+..+++
T Consensus 234 ~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~i-PVi~~G----gi~t~e~a~~~l~ 308 (349)
T 3hgj_A 234 GGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGL-RTGAVG----LITTPEQAETLLQ 308 (349)
T ss_dssp TSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCC-EEEECS----SCCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcCc-eEEEEC----CCCCHHHHHHHHH
Confidence 245778899999999999999999874 1111 1132334677888887643 443321 11 2567788899
Q ss_pred cC-CCEEe
Q 012949 371 MG-ISTVD 377 (452)
Q Consensus 371 aG-a~~VD 377 (452)
.| ||.|-
T Consensus 309 ~G~aD~V~ 316 (349)
T 3hgj_A 309 AGSADLVL 316 (349)
T ss_dssp TTSCSEEE
T ss_pred CCCceEEE
Confidence 99 88664
No 129
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=94.19 E-value=0.7 Score=47.20 Aligned_cols=179 Identities=13% Similarity=0.122 Sum_probs=110.9
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEecCC---CCCcccccCCHHHHHHHHHhcc-CCceeEEecchhhhhhhhhhhhhccchh
Q 012949 146 PTGVKVELIRRLVSSGLPVVEATSFV---SPKWVPQLADARDVMEAVRDLE-GARLPVLTPNLKVILQRSILFQQCHASV 221 (452)
Q Consensus 146 ~~~~k~~i~~~L~~~Gv~~IEvG~~~---s~~~~p~~~D~e~v~~~i~~~~-~~~l~~l~~~~~~~i~r~~~~~~~~~~~ 221 (452)
+.+.-+++++.+.++|++.|-.+.+- +|...-.+ . ++-+..+++.. ...+++++.-..
T Consensus 154 s~e~a~~~a~~~k~aGa~~vk~q~fkprts~~~f~gl-~-~egl~~L~~~~~~~Gl~~~te~~d---------------- 215 (385)
T 3nvt_A 154 SYEQVAAVAESIKAKGLKLIRGGAFKPRTSPYDFQGL-G-LEGLKILKRVSDEYGLGVISEIVT---------------- 215 (385)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCC-T-HHHHHHHHHHHHHHTCEEEEECCS----------------
T ss_pred CHHHHHHHHHHHHHcCCCeEEcccccCCCChHhhcCC-C-HHHHHHHHHHHHHcCCEEEEecCC----------------
Confidence 78899999999999999999998763 22211111 1 12233343321 223444442111
Q ss_pred hhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCC-C
Q 012949 222 ISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGA-I 300 (452)
Q Consensus 222 i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r-~ 300 (452)
...++.+.+. ++.+.|....-. + .++++++.+.|.+|. |+. +. .
T Consensus 216 --------~~~~~~l~~~-vd~lkIgs~~~~----------------n-~~LL~~~a~~gkPVi--lk~-------G~~~ 260 (385)
T 3nvt_A 216 --------PADIEVALDY-VDVIQIGARNMQ----------------N-FELLKAAGRVDKPIL--LKR-------GLSA 260 (385)
T ss_dssp --------GGGHHHHTTT-CSEEEECGGGTT----------------C-HHHHHHHHTSSSCEE--EEC-------CTTC
T ss_pred --------HHHHHHHHhh-CCEEEECccccc----------------C-HHHHHHHHccCCcEE--Eec-------CCCC
Confidence 1266677666 898887643211 1 155577778899986 442 23 6
Q ss_pred CHHHHHHHHHHHHHCCcCEEEEcCC--cCCCc-HHHHHH--HHHHHHHhCCCccE-EEEeCC--CcCcHHHHHHHHHHcC
Q 012949 301 PPSKVAYVAKELHDMGCFEISLGDT--IGVGT-PGTVVP--MLEAVMAVVPVEKL-AVHLHD--TYGQSLPNILISLQMG 372 (452)
Q Consensus 301 d~e~l~~~a~~l~~~Gad~I~L~DT--~G~~~-P~~v~~--li~~l~~~~p~~~l-~vH~Hn--d~GlA~ANaLaAl~aG 372 (452)
+++.+...++.+.+.|...|.|+.- ..+-+ |....+ .+..+++.+.. || .=|.|. +..+..+-+++|+.+|
T Consensus 261 t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~yp~~~~~~ldl~~i~~lk~~~~l-pV~~D~th~~G~r~~v~~~a~AAvA~G 339 (385)
T 3nvt_A 261 TIEEFIGAAEYIMSQGNGKIILCERGIRTYEKATRNTLDISAVPILKKETHL-PVMVDVTHSTGRKDLLLPCAKAALAIE 339 (385)
T ss_dssp CHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSS-CEEEEHHHHHCCGGGHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccccCHHHHHHHHHhcCC-CEEEcCCCCCCccchHHHHHHHHHHhC
Confidence 7899999999999999987777774 33322 222111 25567775532 34 447775 3556667899999999
Q ss_pred CC--EEee
Q 012949 373 IS--TVDC 378 (452)
Q Consensus 373 a~--~VD~ 378 (452)
|+ .|+.
T Consensus 340 A~gl~iE~ 347 (385)
T 3nvt_A 340 ADGVMAEV 347 (385)
T ss_dssp CSEEEEEB
T ss_pred CCEEEEEe
Confidence 99 8876
No 130
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=94.17 E-value=3.9 Score=38.65 Aligned_cols=212 Identities=13% Similarity=0.043 Sum_probs=124.1
Q ss_pred HHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCC--ceeEEe--cchhhhhhhhhhhhhccchhh
Q 012949 147 TGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGA--RLPVLT--PNLKVILQRSILFQQCHASVI 222 (452)
Q Consensus 147 ~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~--~l~~l~--~~~~~~i~r~~~~~~~~~~~i 222 (452)
.++.++-++.+.+.|.|.||+-...... .+.+++.+.++.+... .++.+. +...+ =|......+
T Consensus 16 ~~e~~~~~~~~~~~~~D~vElRvD~l~~-----~~~~~v~~~~~~lr~~~~~~PiI~T~R~~~e-----GG~~~~~~~-- 83 (238)
T 1sfl_A 16 IEETLIQKINHRIDAIDVLELRIDQFEN-----VTVDQVAEMITKLKVMQDSFKLLVTYRTKLQ-----GGYGQFTND-- 83 (238)
T ss_dssp --CHHHHHHHHTTTTCSEEEEECTTSTT-----CCHHHHHHHHHHHC---CCSEEEEECCBGGG-----TSCBCCCHH--
T ss_pred HHHHHHHHHHhhhcCCCEEEEEeccccc-----CCHHHHHHHHHHHHHhccCCCEEEEeecccc-----CCCCCCCHH--
Confidence 3455566777778899999998543221 1445555555443221 234332 21110 000000000
Q ss_pred hhhhhccHHhHHHHHHc-CCCEEEEEecC--ChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCC
Q 012949 223 SSNLWVYLQGFEAAIAA-GAKEVAIFASA--SEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGA 299 (452)
Q Consensus 223 ~~~~~~~~~~ie~a~~~-Gi~~V~i~~s~--Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r 299 (452)
.+.+-++.+++. +++.|.|-... .+ +.+.++++.+++.|.+|.+ |+-. +...
T Consensus 84 -----~~~~ll~~~~~~~~~d~iDvEl~~~~~~---------------~~~~~l~~~~~~~~~kvI~--S~Hd---f~~t 138 (238)
T 1sfl_A 84 -----SYLNLISDLANINGIDMIDIEWQADIDI---------------EKHQRIITHLQQYNKEVII--SHHN---FEST 138 (238)
T ss_dssp -----HHHHHHHHGGGCTTCCEEEEECCTTSCH---------------HHHHHHHHHHHHTTCEEEE--EEEE---SSCC
T ss_pred -----HHHHHHHHHHHhCCCCEEEEEccCCCCh---------------HHHHHHHHHHHhcCCEEEE--EecC---CCCC
Confidence 123456777777 69999987754 33 3345677888898988763 3211 1122
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHh--CCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEe
Q 012949 300 IPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAV--VPVEKLAVHLHDTYGQSLPNILISLQMGISTVD 377 (452)
Q Consensus 300 ~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~--~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD 377 (452)
.+.+.+.+..+.+.+.|||.+.|+=+. -++.++..++....+. .+..|+-. =+.-.++.-.-+.+-..|-...-
T Consensus 139 p~~~el~~~~~~~~~~gaDivKia~~a--~~~~D~l~ll~~~~~~~~~~~~P~I~--~~MG~~G~~SRi~~~~~GS~~tf 214 (238)
T 1sfl_A 139 PPLDELQFIFFKMQKFNPEYVKLAVMP--HNKNDVLNLLQAMSTFSDTMDCKVVG--ISMSKLGLISRTAQGVFGGALTY 214 (238)
T ss_dssp CCHHHHHHHHHHHHTTCCSEEEEEECC--SSHHHHHHHHHHHHHHHHHCSSEEEE--EECTGGGHHHHHTGGGGTBCEEE
T ss_pred cCHHHHHHHHHHHHHcCCCEEEEEecC--CCHHHHHHHHHHHHHHhhcCCCCEEE--EECCCCchHHHHHHHHhCCCeee
Confidence 235788889999999999999997664 4578888887765542 23334332 22333445566666678877888
Q ss_pred ecccCCCCCCCCCCCCCcccHHHHHHHHH
Q 012949 378 CSVAGLGGCPYAKGASGNVATEDVVYMLS 406 (452)
Q Consensus 378 ~Sv~GlGecP~a~graGNaalE~vv~~L~ 406 (452)
+++.. +- ..|+.+.+++...|+
T Consensus 215 ~~l~~----~s---APGQl~~~el~~~l~ 236 (238)
T 1sfl_A 215 GCIGE----PQ---APGQIDVTDLKAQVT 236 (238)
T ss_dssp EBSSC----CS---STTCCBHHHHHHHHT
T ss_pred cCCCC----CC---CCCCCCHHHHHHHHH
Confidence 87742 33 455999999987765
No 131
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=94.11 E-value=1.2 Score=43.11 Aligned_cols=165 Identities=16% Similarity=0.138 Sum_probs=93.4
Q ss_pred HHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEecchhhhhhhhhhhhhccchhhhhhhhc
Q 012949 149 VKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLWV 228 (452)
Q Consensus 149 ~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~~ 228 (452)
+-.++++...+.|...|.+-.. ++|. .-..+.+..+++.. .++++.-.. ++
T Consensus 73 ~p~~~A~~y~~~GA~~isvltd--~~~f---~Gs~~~l~~ir~~v--~lPvl~kdf----------------ii------ 123 (272)
T 3qja_A 73 DPAKLAQAYQDGGARIVSVVTE--QRRF---QGSLDDLDAVRASV--SIPVLRKDF----------------VV------ 123 (272)
T ss_dssp CHHHHHHHHHHTTCSEEEEECC--GGGH---HHHHHHHHHHHHHC--SSCEEEESC----------------CC------
T ss_pred CHHHHHHHHHHcCCCEEEEecC--hhhc---CCCHHHHHHHHHhC--CCCEEECcc----------------cc------
Confidence 4578999999999999998421 1111 01123445555432 344443111 00
Q ss_pred cHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHH
Q 012949 229 YLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYV 308 (452)
Q Consensus 229 ~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~ 308 (452)
....++.|.++|+|.|.+..+.-+ .+.+.++++.++++|+.+-+.+ .+++.+.
T Consensus 124 d~~qv~~A~~~GAD~VlLi~a~l~--------------~~~l~~l~~~a~~lGl~~lvev-----------~t~ee~~-- 176 (272)
T 3qja_A 124 QPYQIHEARAHGADMLLLIVAALE--------------QSVLVSMLDRTESLGMTALVEV-----------HTEQEAD-- 176 (272)
T ss_dssp SHHHHHHHHHTTCSEEEEEGGGSC--------------HHHHHHHHHHHHHTTCEEEEEE-----------SSHHHHH--
T ss_pred CHHHHHHHHHcCCCEEEEecccCC--------------HHHHHHHHHHHHHCCCcEEEEc-----------CCHHHHH--
Confidence 112488999999999998654221 1345677899999999864221 2345443
Q ss_pred HHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCC-CccEEEEeCCCcCcH-HHHHHHHHHcCCCEE
Q 012949 309 AKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVP-VEKLAVHLHDTYGQS-LPNILISLQMGISTV 376 (452)
Q Consensus 309 a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p-~~~l~vH~Hnd~GlA-~ANaLaAl~aGa~~V 376 (452)
.+.++|++.|.+.-......+..+ +.+..+++.+| +.++-. -.|.. ..+.....++||+.|
T Consensus 177 --~A~~~Gad~IGv~~r~l~~~~~dl-~~~~~l~~~v~~~~pvVa----egGI~t~edv~~l~~~Gadgv 239 (272)
T 3qja_A 177 --RALKAGAKVIGVNARDLMTLDVDR-DCFARIAPGLPSSVIRIA----ESGVRGTADLLAYAGAGADAV 239 (272)
T ss_dssp --HHHHHTCSEEEEESBCTTTCCBCT-THHHHHGGGSCTTSEEEE----ESCCCSHHHHHHHHHTTCSEE
T ss_pred --HHHHCCCCEEEECCCcccccccCH-HHHHHHHHhCcccCEEEE----ECCCCCHHHHHHHHHcCCCEE
Confidence 334569999988643221111111 23445555565 333332 23444 577778888998855
No 132
>1dos_A Aldolase class II; lyase, classii fructose 1,6-bisphosphate aldolase, glycolysis; 1.67A {Escherichia coli} SCOP: c.1.10.2 PDB: 1b57_A* 1gyn_A 1zen_A
Probab=94.06 E-value=1 Score=45.47 Aligned_cols=125 Identities=17% Similarity=0.145 Sum_probs=82.9
Q ss_pred cCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCC----------CCCCHHHHHHH
Q 012949 239 AGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVE----------GAIPPSKVAYV 308 (452)
Q Consensus 239 ~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~----------~r~d~e~l~~~ 308 (452)
.|..-|.+=.|. .+.||.++..++++++|++.|+.|.+.|-..-|.+|. -.++|+...++
T Consensus 136 ~gFtSVMiDgS~----------~p~eENI~~Tkevv~~ah~~gvsVEaELG~vGG~EDgv~~~~~~~~~~yT~Peea~~f 205 (358)
T 1dos_A 136 PLFSSHMIDLSE----------ESLQENIEICSKYLERMSKIGMTLEIELGCTGGEEDGVDNSHMDASALYTQPEDVDYA 205 (358)
T ss_dssp CSCSEEEECCTT----------SCHHHHHHHHHHHHHHHHHTTCEEEEECCCCCCCCCCCSCCCCCCCCCSCCHHHHHHH
T ss_pred CCCceEeecCCC----------CCHHHHHHHHHHHHHHHHHcCCEEEEEeccccCcCCCccccccccccccCCHHHHHHH
Confidence 457877654332 3568999999999999999999999888876444542 13899999999
Q ss_pred HHHHHHCCcC-EEEEcCCcCC-----------CcHHHHHHHHHHHHHhC--CC--ccEEEEeCCCcCcHHHHHHHHHHcC
Q 012949 309 AKELHDMGCF-EISLGDTIGV-----------GTPGTVVPMLEAVMAVV--PV--EKLAVHLHDTYGQSLPNILISLQMG 372 (452)
Q Consensus 309 a~~l~~~Gad-~I~L~DT~G~-----------~~P~~v~~li~~l~~~~--p~--~~l~vH~Hnd~GlA~ANaLaAl~aG 372 (452)
++++. |+| ...|+=++|. +.|+...++=+.+++.+ |. ++|.+|. --|........|+..|
T Consensus 206 v~~tt--gvd~~d~LAvaiGt~HG~Yk~g~p~L~~~~L~~i~~~i~~~~g~~~~~vpLVlHG--gSG~~~e~i~~ai~~G 281 (358)
T 1dos_A 206 YTELS--KISPRFTIAASFGNVHGVYKAGNVVLTPTILRDSQEYVSKKHNLPHNSLNFVFHG--GSGSTAQEIKDSVSYG 281 (358)
T ss_dssp HHHHH--TTCSCEEEECCSSCCCSSCCCSCCCCCTHHHHHHHHHHHHHHTCCTTCSCEEECS--CTTCCHHHHHHHHHTT
T ss_pred HHHhc--CCChhceEEEecccccCccCCCCCCcCHHHHHHHHHHHHHHhCCCCCCCcEEEeC--CCCCCHHHHHHHHHCC
Confidence 88754 444 2233333332 23454444444444332 22 4676666 4588888999999999
Q ss_pred CCEEe
Q 012949 373 ISTVD 377 (452)
Q Consensus 373 a~~VD 377 (452)
+.-|+
T Consensus 282 V~KiN 286 (358)
T 1dos_A 282 VVKMN 286 (358)
T ss_dssp EEEEE
T ss_pred CeEEE
Confidence 87554
No 133
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=94.01 E-value=1.2 Score=43.37 Aligned_cols=133 Identities=10% Similarity=0.062 Sum_probs=81.4
Q ss_pred HhHHHHHHcCCC-EEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhC-CCcEEEEEEeeecCCCCCCCCHHHHHHH
Q 012949 231 QGFEAAIAAGAK-EVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVL-SIPVRGYVSCVVGCPVEGAIPPSKVAYV 308 (452)
Q Consensus 231 ~~ie~a~~~Gi~-~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~-G~~V~~~l~~~~g~p~~~r~d~e~l~~~ 308 (452)
+.++.+.++|+| .|.+-++.-.......++.+.+ .+.++++.+|+. +++|.+-+. ++ .+.+.+.++
T Consensus 110 ~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e----~~~~iv~~vr~~~~~Pv~vKi~-----~~---~~~~~~~~~ 177 (311)
T 1jub_A 110 AMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFE----ATEKLLKEVFTFFTKPLGVKLP-----PY---FDLVHFDIM 177 (311)
T ss_dssp HHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHH----HHHHHHHHHTTTCCSCEEEEEC-----CC---CSHHHHHHH
T ss_pred HHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHH----HHHHHHHHHHHhcCCCEEEEEC-----CC---CCHHHHHHH
Confidence 356777789999 7877553111111112333444 345667777765 667654332 22 366788889
Q ss_pred HHHHHHCCcCEEEEcCCcC-------------------------CCcHHHHHHHHHHHHHhCC-CccEEEEeCCCcCcH-
Q 012949 309 AKELHDMGCFEISLGDTIG-------------------------VGTPGTVVPMLEAVMAVVP-VEKLAVHLHDTYGQS- 361 (452)
Q Consensus 309 a~~l~~~Gad~I~L~DT~G-------------------------~~~P~~v~~li~~l~~~~p-~~~l~vH~Hnd~GlA- 361 (452)
++.+.++|+|.|.+.++.+ ........++++.+++.++ .++|-.=+ |..
T Consensus 178 a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi~~G----GI~~ 253 (311)
T 1jub_A 178 AEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGTG----GIET 253 (311)
T ss_dssp HHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEEES----SCCS
T ss_pred HHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCEEEEC----CCCC
Confidence 9999999999999988752 1111123567888888774 45554432 332
Q ss_pred HHHHHHHHHcCCCEEeec
Q 012949 362 LPNILISLQMGISTVDCS 379 (452)
Q Consensus 362 ~ANaLaAl~aGa~~VD~S 379 (452)
-..+..++.+||+.|-..
T Consensus 254 ~~da~~~l~~GAd~V~vg 271 (311)
T 1jub_A 254 GQDAFEHLLCGATMLQIG 271 (311)
T ss_dssp HHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEc
Confidence 246677788999987543
No 134
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=94.01 E-value=4.4 Score=38.80 Aligned_cols=234 Identities=15% Similarity=0.050 Sum_probs=136.7
Q ss_pred ccEEEeCCccccCCCCCC---CCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHH---HHHhccCCceeE
Q 012949 126 FVKIVEVGPRDGLQNEKN---TVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVME---AVRDLEGARLPV 199 (452)
Q Consensus 126 ~V~I~D~TLRDG~Q~~~~---~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~---~i~~~~~~~l~~ 199 (452)
.|+|-+.++..|.-..-. .-+.++.+..++.+.+.|.|.||+-...... ..+.+++.+ .+++..+ .++.
T Consensus 7 ~~~v~~~~~g~~~p~Icv~l~~~~~~e~~~~~~~~~~~~~D~vElRvD~l~~----~~~~~~v~~~l~~lr~~~~-~~Pi 81 (257)
T 2yr1_A 7 AIKVRNIWIGGTEPCICAPVVGEDDRKVLREAEEVCRKQPDLLEWRADFFRA----IDDQERVLATANGLRNIAG-EIPI 81 (257)
T ss_dssp CEEETTEEESSSSCEEEEEECCSSHHHHHHHHHHHHHSCCSEEEEEGGGCTT----TTCHHHHHHHHHHHHHHSS-SCCE
T ss_pred eEEEeeeeeCCCCcEEEEEecCCCHHHHHHHHHHHhhcCCCEEEEEeecccc----cCcHHHHHHHHHHHHHhcc-CCCE
Confidence 377777777666542211 2345666677777788999999997542211 123444444 3443331 2333
Q ss_pred Ee--cchhhhhhhhhh-hhhccchhhhhhhhccHHhHHHHHHcC-CCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHH
Q 012949 200 LT--PNLKVILQRSIL-FQQCHASVISSNLWVYLQGFEAAIAAG-AKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAH 275 (452)
Q Consensus 200 l~--~~~~~~i~r~~~-~~~~~~~~i~~~~~~~~~~ie~a~~~G-i~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~ 275 (452)
+. +...+ =| |..... -.+.+-++.+++.| ++.|.|-....+ .+.++++
T Consensus 82 I~T~Rt~~e-----GG~~~~~~~-------~~~~~ll~~~~~~g~~d~iDvEl~~~~----------------~~~~l~~ 133 (257)
T 2yr1_A 82 LFTIRSERE-----GGQPIPLNE-------AEVRRLIEAICRSGAIDLVDYELAYGE----------------RIADVRR 133 (257)
T ss_dssp EEECCCTTT-----TCCCCSSCH-------HHHHHHHHHHHHHTCCSEEEEEGGGTT----------------HHHHHHH
T ss_pred EEEEeeccc-----CCCCCCCCH-------HHHHHHHHHHHHcCCCCEEEEECCCCh----------------hHHHHHH
Confidence 32 21110 00 000000 01334667888888 999998764322 2345678
Q ss_pred HHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHh--CCCccEEEE
Q 012949 276 AAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAV--VPVEKLAVH 353 (452)
Q Consensus 276 ~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~--~p~~~l~vH 353 (452)
.+++.|.+|.+ |+-. +....+.+.+.+..+.+.+.|||.+-|+=+. -++.++..++....+. .+..|+-.-
T Consensus 134 ~~~~~~~kvI~--S~Hd---f~~tP~~~el~~~~~~~~~~gaDivKia~~a--~s~~D~l~ll~~~~~~~~~~~~P~I~~ 206 (257)
T 2yr1_A 134 MTEECSVWLVV--SRHY---FDGTPRKETLLADMRQAERYGADIAKVAVMP--KSPEDVLVLLQATEEARRELAIPLITM 206 (257)
T ss_dssp HHHHTTCEEEE--EEEE---SSCCCCHHHHHHHHHHHHHTTCSEEEEEECC--SSHHHHHHHHHHHHHHHHHCSSCEEEE
T ss_pred HHHhCCCEEEE--EecC---CCCCcCHHHHHHHHHHHHhcCCCEEEEEecc--CCHHHHHHHHHHHHHHhccCCCCEEEE
Confidence 88888988763 3211 1122235788889999999999999997664 4588888888765542 233344332
Q ss_pred eCCCcCcHHHHHHHHHHcCCCEEeecccCCCCCCCCCCCCCcccHHHHHHHHHcC
Q 012949 354 LHDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGL 408 (452)
Q Consensus 354 ~Hnd~GlA~ANaLaAl~aGa~~VD~Sv~GlGecP~a~graGNaalE~vv~~L~~~ 408 (452)
+ .-.++...-+.+-..|-...-+++. + +-| .|+.+.+++...|+.+
T Consensus 207 ~--MG~~G~~SRi~~~~~GS~~Tf~~l~---~-~sA---PGQl~~~el~~~l~~l 252 (257)
T 2yr1_A 207 A--MGGLGAITRLAGWLFGSAVTFAVGN---Q-SSA---PGQIPIDDVRTVLSIL 252 (257)
T ss_dssp E--CTTTTHHHHHHGGGGTBCEEECBSS---S-CSS---TTCCBHHHHHHHHHHH
T ss_pred E--CCCCcchHHHHHHHhCCceEecCCC---C-CCC---CCCCCHHHHHHHHHHH
Confidence 2 2234456667777788777777773 3 333 5589999998777643
No 135
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=94.00 E-value=2.6 Score=40.58 Aligned_cols=142 Identities=8% Similarity=0.047 Sum_probs=76.0
Q ss_pred CccEEEeCCccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEe-cc
Q 012949 125 RFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLT-PN 203 (452)
Q Consensus 125 ~~V~I~D~TLRDG~Q~~~~~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~-~~ 203 (452)
+++-+.=-|+||-.+. .+ -.+.++.+.++|++.||+.......+.+ .+.+++.+.+++ .++++.++. +.
T Consensus 13 ~~~g~~~~s~~~~~~~----~~---~~~~l~~~a~~G~~~VEl~~~~~~~~~~--~~~~~~~~~l~~-~GL~v~~~~~~~ 82 (303)
T 3l23_A 13 KEIGLQIYSLSQELYK----GD---VAANLRKVKDMGYSKLELAGYGKGAIGG--VPMMDFKKMAED-AGLKIISSHVNP 82 (303)
T ss_dssp CCCEEEGGGGGGGGGS----SC---HHHHHHHHHHTTCCEEEECCEETTEETT--EEHHHHHHHHHH-TTCEEEEEECCC
T ss_pred CceEEEEEEchhhhcc----CC---HHHHHHHHHHcCCCEEEeccccCcccCC--CCHHHHHHHHHH-cCCeEEEEeccc
Confidence 4566666788875442 13 3467778889999999997421110111 245666666655 456655443 21
Q ss_pred hhhhhhhhh-----hhhh-ccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHH
Q 012949 204 LKVILQRSI-----LFQQ-CHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAA 277 (452)
Q Consensus 204 ~~~~i~r~~-----~~~~-~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~A 277 (452)
....+.... .+.+ .....++ ...+.++.|.+.|++.|.+...... ......+...+.+.++.++|
T Consensus 83 ~~~~~~~p~~~~~~~~~~~~~~~~~~----~~~~~i~~A~~lG~~~v~~~~~~~~-----~~~~~~~~~~~~l~~l~~~a 153 (303)
T 3l23_A 83 VDTSISDPFKAMIFKYSKEVTPKIME----YWKATAADHAKLGCKYLIQPMMPTI-----TTHDEAKLVCDIFNQASDVI 153 (303)
T ss_dssp BCTTCSSTTTTBCCSCCTTTHHHHHH----HHHHHHHHHHHTTCSEEEECSCCCC-----CSHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCcccccccccchhhHHHHHH----HHHHHHHHHHHcCCCEEEECCCCCC-----CCHHHHHHHHHHHHHHHHHH
Confidence 100000000 0000 0011111 1234778888999999987532110 00012345677788889999
Q ss_pred HhCCCc--EE
Q 012949 278 KVLSIP--VR 285 (452)
Q Consensus 278 k~~G~~--V~ 285 (452)
++.|+. +.
T Consensus 154 ~~~Gv~~~l~ 163 (303)
T 3l23_A 154 KAEGIATGFG 163 (303)
T ss_dssp HHTTCTTCEE
T ss_pred HHCCCcceEE
Confidence 999998 75
No 136
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=93.95 E-value=0.54 Score=47.38 Aligned_cols=141 Identities=13% Similarity=0.090 Sum_probs=88.7
Q ss_pred HhHHHHHHcCCCEEEEEecC--------ChHHH--hhhcCCCHHHHHHHHHHHHHHHHhC-C--CcEEEEEEeeecCCCC
Q 012949 231 QGFEAAIAAGAKEVAIFASA--------SEAFS--KSNINCSIEDSLVRYRAVAHAAKVL-S--IPVRGYVSCVVGCPVE 297 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~--------Sd~~~--~~~~~~s~e~~l~~~~~~v~~Ak~~-G--~~V~~~l~~~~g~p~~ 297 (452)
+..++|.++|.|.|.|-..- |+..+ ...+|-|.++=.+.+.++++.+|+. | +.|.+-|+..- ....
T Consensus 162 ~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~-~~~~ 240 (363)
T 3l5l_A 162 DAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLE-YDGR 240 (363)
T ss_dssp HHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEEC-SSSC
T ss_pred HHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchh-cCCC
Confidence 35567788999999887541 33222 2235778887788888999998875 3 45655555321 0011
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCc--CC----CcHHHHHHHHHHHHHhCCCccEEEEeCCCcCc-HHHHHHHHHH
Q 012949 298 GAIPPSKVAYVAKELHDMGCFEISLGDTI--GV----GTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQ-SLPNILISLQ 370 (452)
Q Consensus 298 ~r~d~e~l~~~a~~l~~~Gad~I~L~DT~--G~----~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~Gl-A~ANaLaAl~ 370 (452)
+..+.+...++++.+.++|+|.|.+.... .. ..|..-.++++.+++.++. +|..= -|. -...+..+++
T Consensus 241 G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~i-PVi~~----GgI~s~e~a~~~l~ 315 (363)
T 3l5l_A 241 DEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAKL-PVTSA----WGFGTPQLAEAALQ 315 (363)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTC-CEEEC----SSTTSHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHcCC-cEEEe----CCCCCHHHHHHHHH
Confidence 11457788899999999999999886521 11 1132234567778877643 44331 122 2567788999
Q ss_pred cC-CCEEe
Q 012949 371 MG-ISTVD 377 (452)
Q Consensus 371 aG-a~~VD 377 (452)
.| ||.|-
T Consensus 316 ~G~aD~V~ 323 (363)
T 3l5l_A 316 ANQLDLVS 323 (363)
T ss_dssp TTSCSEEE
T ss_pred CCCccEEE
Confidence 99 88663
No 137
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=93.91 E-value=1.8 Score=42.49 Aligned_cols=141 Identities=18% Similarity=0.164 Sum_probs=90.5
Q ss_pred hHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHHH
Q 012949 232 GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKE 311 (452)
Q Consensus 232 ~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~ 311 (452)
-.+.|.+.|+.-|-+.-. + +. .+.+..+..+++| +.+.|+|. +..+.+--+.-++.
T Consensus 79 lc~eA~~~g~aaVCV~P~----~------------V~---~a~~~L~~s~V~V----~tVigFP~-G~~~~~~Kv~Ea~~ 134 (288)
T 3oa3_A 79 LCAEAKEYGFATVCVRPD----Y------------VS---RAVQYLQGTQVGV----TCVIGFHE-GTYSTDQKVSEAKR 134 (288)
T ss_dssp HHHHHHHHTCSEEEECGG----G------------HH---HHHHHTTTSSCEE----EEEESTTT-SCSCHHHHHHHHHH
T ss_pred HHHHHHhcCCcEEEECHH----H------------HH---HHHHHcCCCCCeE----EEEeCCCC-CCCcHHHHHHHHHH
Confidence 456777789988877521 1 12 1222233335444 34466776 44556666667788
Q ss_pred HHHCCcCEEEEcCCcCC---CcHHHHHHHHHHHHHhCCC--cc--EEEEeCCCcCcHHHHHHHHHHcCCCEEeecccCCC
Q 012949 312 LHDMGCFEISLGDTIGV---GTPGTVVPMLEAVMAVVPV--EK--LAVHLHDTYGQSLPNILISLQMGISTVDCSVAGLG 384 (452)
Q Consensus 312 l~~~Gad~I~L~DT~G~---~~P~~v~~li~~l~~~~p~--~~--l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~Sv~GlG 384 (452)
+.+.|||.|-+.=-+|. ..-..+.+-|+.+++..+. .+ |+-...++--.. ..+..|+++|||+|=+| .|++
T Consensus 135 Ai~~GAdEIDmVINig~lk~g~~~~v~~eI~~V~~a~~~~~lKVIlEt~~Lt~eei~-~A~~ia~eaGADfVKTS-TGf~ 212 (288)
T 3oa3_A 135 AMQNGASELDMVMNYPWLSEKRYTDVFQDIRAVRLAAKDAILKVILETSQLTADEII-AGCVLSSLAGADYVKTS-TGFN 212 (288)
T ss_dssp HHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHH-HHHHHHHHTTCSEEECC-CSSS
T ss_pred HHHcCCCEEEEEeehhhhcCCcHHHHHHHHHHHHHHhcCCCceEEEECCCCCHHHHH-HHHHHHHHcCCCEEEcC-CCCC
Confidence 88999999987766776 4557888889999887643 12 333334443333 24677889999999999 7765
Q ss_pred CCCCCCCCCCcccHHHHHHHHH
Q 012949 385 GCPYAKGASGNVATEDVVYMLS 406 (452)
Q Consensus 385 ecP~a~graGNaalE~vv~~L~ 406 (452)
. |++.+|++..+.+
T Consensus 213 ~--------~GAT~edv~lmr~ 226 (288)
T 3oa3_A 213 G--------PGASIENVSLMSA 226 (288)
T ss_dssp S--------CCCCHHHHHHHHH
T ss_pred C--------CCCCHHHHHHHHH
Confidence 3 5677888765554
No 138
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=93.89 E-value=2.5 Score=38.67 Aligned_cols=174 Identities=10% Similarity=0.076 Sum_probs=98.7
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEecchhhhhhhhhhhhhccchhhhhh
Q 012949 146 PTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSN 225 (452)
Q Consensus 146 ~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~ 225 (452)
..+...++++.+.+.|.+.|++.. .+.++.+++..+..+....... +...+. .+.
T Consensus 21 ~~~~~~~~a~~~~~~Ga~~i~~~~-------------~~~i~~i~~~~~~pv~~~~~~~---------~~~~~~-~i~-- 75 (223)
T 1y0e_A 21 SSFIMSKMALAAYEGGAVGIRANT-------------KEDILAIKETVDLPVIGIVKRD---------YDHSDV-FIT-- 75 (223)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEES-------------HHHHHHHHHHCCSCEEEECBCC---------CTTCCC-CBS--
T ss_pred CCccHHHHHHHHHHCCCeeeccCC-------------HHHHHHHHHhcCCCEEeeeccC---------CCcccc-ccC--
Confidence 557888999999999999998852 1345666655454432211100 000000 000
Q ss_pred hhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhC--CCcEEEEEEeeecCCCCCCCCHH
Q 012949 226 LWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVL--SIPVRGYVSCVVGCPVEGAIPPS 303 (452)
Q Consensus 226 ~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~--G~~V~~~l~~~~g~p~~~r~d~e 303 (452)
...+.++.++++|++.|.+-...-. +... .+.++++.+|+. |..+.. . ..+++
T Consensus 76 --~~~~~i~~~~~~Gad~v~l~~~~~~-----~p~~-------~~~~~i~~~~~~~~~~~v~~--~---------~~t~~ 130 (223)
T 1y0e_A 76 --ATSKEVDELIESQCEVIALDATLQQ-----RPKE-------TLDELVSYIRTHAPNVEIMA--D---------IATVE 130 (223)
T ss_dssp --CSHHHHHHHHHHTCSEEEEECSCSC-----CSSS-------CHHHHHHHHHHHCTTSEEEE--E---------CSSHH
T ss_pred --CcHHHHHHHHhCCCCEEEEeeeccc-----Cccc-------CHHHHHHHHHHhCCCceEEe--c---------CCCHH
Confidence 0234788899999999987653310 0000 123566777776 776541 1 12344
Q ss_pred HHHHHHHHHHHCCcCEEEEcCC------cCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCc-HHHHHHHHHHcCCCEE
Q 012949 304 KVAYVAKELHDMGCFEISLGDT------IGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQ-SLPNILISLQMGISTV 376 (452)
Q Consensus 304 ~l~~~a~~l~~~Gad~I~L~DT------~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~Gl-A~ANaLaAl~aGa~~V 376 (452)
. ++.+.++|+|.|.+.-. .+......-.++++.+++.+. +++.. +=|. ...++..++++||+.|
T Consensus 131 e----~~~~~~~G~d~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~~-ipvia----~GGI~~~~~~~~~~~~Gad~v 201 (223)
T 1y0e_A 131 E----AKNAARLGFDYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSVD-AKVIA----EGNVITPDMYKRVMDLGVHCS 201 (223)
T ss_dssp H----HHHHHHTTCSEEECTTTTSSTTSTTCCTTHHHHHHHHHHHHHCC-SEEEE----ESSCCSHHHHHHHHHTTCSEE
T ss_pred H----HHHHHHcCCCEEEeCCCcCcCCCCCCCCCcccHHHHHHHHhhCC-CCEEE----ecCCCCHHHHHHHHHcCCCEE
Confidence 3 34577899998875321 111102223457788887663 34443 3466 5788888999998866
Q ss_pred ee
Q 012949 377 DC 378 (452)
Q Consensus 377 D~ 378 (452)
=.
T Consensus 202 ~v 203 (223)
T 1y0e_A 202 VV 203 (223)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 139
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=93.89 E-value=1.1 Score=41.77 Aligned_cols=175 Identities=14% Similarity=0.070 Sum_probs=93.6
Q ss_pred HHHHHHHHHHHCCCCEEEEe----cCCCCCcccccCCHHHHHHHHHhccCCceeEEecchhhhhhhhhhhhhccchhhhh
Q 012949 149 VKVELIRRLVSSGLPVVEAT----SFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISS 224 (452)
Q Consensus 149 ~k~~i~~~L~~~Gv~~IEvG----~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~ 224 (452)
+-.++++.+.+.|++.|.+- .+. +.. .. +.++.+++..+..+ ++-+.-
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~~-----~~~-~~-~~i~~i~~~~~ipv--~v~ggI------------------- 84 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAFG-----TGD-NR-ALIAEVAQAMDIKV--ELSGGI------------------- 84 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHHT-----SCC-CH-HHHHHHHHHCSSEE--EEESSC-------------------
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhhc-----CCC-hH-HHHHHHHHhcCCcE--EEECCc-------------------
Confidence 56788999999999999983 222 111 22 45566655434333 321110
Q ss_pred hhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeec-CCCCC--CCC
Q 012949 225 NLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVG-CPVEG--AIP 301 (452)
Q Consensus 225 ~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g-~p~~~--r~d 301 (452)
...++++.++++|++.|.+-.. .+.+...+.+..++.|..+...+..-.| -..++ ..+
T Consensus 85 ---~~~~~~~~~l~~Gad~V~lg~~----------------~l~~p~~~~~~~~~~g~~~~~~l~~~~g~v~~~g~~~~~ 145 (244)
T 1vzw_A 85 ---RDDDTLAAALATGCTRVNLGTA----------------ALETPEWVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRDG 145 (244)
T ss_dssp ---CSHHHHHHHHHTTCSEEEECHH----------------HHHCHHHHHHHHHHHGGGEEEEEEEETTEECCSSSCCCC
T ss_pred ---CCHHHHHHHHHcCCCEEEECch----------------HhhCHHHHHHHHHHcCCcEEEEEEccCCEEEEcCcccCC
Confidence 0124788999999999887532 2222223334445555444433332100 00011 111
Q ss_pred HHHHHHHHHHHHHCCcCEEEEcCCc--CCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHH-HHHHHHHHc---CCCE
Q 012949 302 PSKVAYVAKELHDMGCFEISLGDTI--GVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSL-PNILISLQM---GIST 375 (452)
Q Consensus 302 ~e~l~~~a~~l~~~Gad~I~L~DT~--G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~-ANaLaAl~a---Ga~~ 375 (452)
. ...++++.+.++|++.|.+-+.. |.... --.++++.+++..+ +++.. +=|... .+...++++ ||+.
T Consensus 146 ~-~~~e~~~~~~~~G~~~i~~~~~~~~~~~~g-~~~~~~~~i~~~~~-ipvia----~GGI~~~~d~~~~~~~~~~Gadg 218 (244)
T 1vzw_A 146 G-DLYETLDRLNKEGCARYVVTDIAKDGTLQG-PNLELLKNVCAATD-RPVVA----SGGVSSLDDLRAIAGLVPAGVEG 218 (244)
T ss_dssp C-BHHHHHHHHHHTTCCCEEEEEC-------C-CCHHHHHHHHHTCS-SCEEE----ESCCCSHHHHHHHHTTGGGTEEE
T ss_pred C-CHHHHHHHHHhCCCCEEEEeccCcccccCC-CCHHHHHHHHHhcC-CCEEE----ECCCCCHHHHHHHHhhccCCCce
Confidence 1 34556777888999988876532 21111 12456666666543 34443 346664 788888888 8775
Q ss_pred Ee
Q 012949 376 VD 377 (452)
Q Consensus 376 VD 377 (452)
|-
T Consensus 219 v~ 220 (244)
T 1vzw_A 219 AI 220 (244)
T ss_dssp EE
T ss_pred ee
Confidence 43
No 140
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=93.88 E-value=0.57 Score=43.83 Aligned_cols=219 Identities=16% Similarity=0.085 Sum_probs=107.1
Q ss_pred HHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEecchhhhhhhhhhhhhccchhhhhhhhccH
Q 012949 151 VELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLWVYL 230 (452)
Q Consensus 151 ~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~~~~ 230 (452)
.+.++.+.++|++.||+....... .+.-.+.+++.+.+++ .++++.++..... |... +...+.......
T Consensus 19 ~~~l~~~~~~G~~~vEl~~~~~~~-~~~~~~~~~~~~~l~~-~gl~~~~~~~~~~--------~~~~-~~~~~~~~~~~~ 87 (281)
T 3u0h_A 19 VLYLDLARETGYRYVDVPFHWLEA-EAERHGDAAVEAMFQR-RGLVLANLGLPLN--------LYDS-EPVFLRELSLLP 87 (281)
T ss_dssp HHHHHHHHHTTCSEECCCHHHHHH-HHHHHCHHHHHHHHHT-TTCEECCEECCSC--------TTSC-HHHHHHHHHTHH
T ss_pred HHHHHHHHHcCCCEEEecHHHHHH-HhcccCHHHHHHHHHH-cCCceEEeccccc--------ccCC-CHHHHHHHHHHH
Confidence 456677788999999997531100 0011233444444443 3455544432211 1100 000110000123
Q ss_pred HhHHHHHHcCCCEEEEEecC-ChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeec-----CCCCCCCCHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASA-SEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVG-----CPVEGAIPPSK 304 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~-Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g-----~p~~~r~d~e~ 304 (452)
+.++.|.+.|++.|.+.... ++.... ...+...+.+.++.++|++.|+++. +...-. .+...-.+++.
T Consensus 88 ~~i~~A~~lG~~~v~~~~~p~~~~~~~----~~~~~~~~~l~~l~~~a~~~Gv~l~--lE~~~~~~~~~~~~~~~~~~~~ 161 (281)
T 3u0h_A 88 DRARLCARLGARSVTAFLWPSMDEEPV----RYISQLARRIRQVAVELLPLGMRVG--LEYVGPHHLRHRRYPFVQSLAD 161 (281)
T ss_dssp HHHHHHHHTTCCEEEEECCSEESSCHH----HHHHHHHHHHHHHHHHHGGGTCEEE--EECCCCGGGCCSSEECCCSHHH
T ss_pred HHHHHHHHcCCCEEEEeecCCCCCcch----hhHHHHHHHHHHHHHHHHHcCCEEE--EEeccccccccccccccCCHHH
Confidence 47788889999999865321 110000 1234566777788899999998764 332100 00011236677
Q ss_pred HHHHHHHHHHCCcCEEE-EcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEeecccCC
Q 012949 305 VAYVAKELHDMGCFEIS-LGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCSVAGL 383 (452)
Q Consensus 305 l~~~a~~l~~~Gad~I~-L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~Sv~Gl 383 (452)
+.++++.+ +.+.+. .-|+.=...-. .+.. .+.+.+.+--..+|++|..+.. .+. ..-
T Consensus 162 ~~~l~~~v---~~~~vg~~~D~~h~~~~g--~~~~-~~~~~~~~~i~~vHl~D~~~~~---------~~~-------~~~ 219 (281)
T 3u0h_A 162 LKTFWEAI---GAPNVGALVDSYHWYTAG--EHED-DLAQLPPEKVVYVHINDTRDAP---------EDA-------HDG 219 (281)
T ss_dssp HHHHHHHH---CCTTEEEEEEHHHHHHTT--CCHH-HHHTSCGGGEEEEEECBCSSCT---------TTC-------CTT
T ss_pred HHHHHHHc---CCCCeeEEeehhHHHHcC--CCHH-HHHhcCcccEEEEEecCCCCCc---------ccc-------hhc
Confidence 77776654 333222 22543211100 0111 2223343334689999987732 010 001
Q ss_pred CCCCCCCCCCCcccHHHHHHHHHcCCCC
Q 012949 384 GGCPYAKGASGNVATEDVVYMLSGLGVE 411 (452)
Q Consensus 384 GecP~a~graGNaalE~vv~~L~~~Gi~ 411 (452)
.. ..+| .|..+...++..|+..|++
T Consensus 220 ~~--~~~G-~G~id~~~~~~~L~~~gy~ 244 (281)
T 3u0h_A 220 KR--LLPG-DGRIPLVPFLRGLYLAGYR 244 (281)
T ss_dssp SC--BCTT-SSSSCHHHHHHHHHHHTCC
T ss_pred cC--cCCC-CcCcCHHHHHHHHHHcCCC
Confidence 11 1133 5889999999999975543
No 141
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=93.85 E-value=0.27 Score=47.33 Aligned_cols=155 Identities=15% Similarity=0.061 Sum_probs=106.0
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCC-CCCCCCHHHHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCP-VEGAIPPSKVAYVA 309 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p-~~~r~d~e~l~~~a 309 (452)
+|+-.....-+|.+-+....+-++-+ +.+++.++.++++|+.|. .|.. .+.......+.++.
T Consensus 29 ~d~Le~~g~yID~lKfg~Gt~~l~~~-----------~~l~eki~l~~~~gV~v~------~GGTl~E~~~~qg~~~~yl 91 (251)
T 1qwg_A 29 EDYLKVCGDYIDFVKFGWGTSAVIDR-----------DVVKEKINYYKDWGIKVY------PGGTLFEYAYSKGKFDEFL 91 (251)
T ss_dssp HHHHHHHGGGCSEEEECTTGGGGSCH-----------HHHHHHHHHHHTTTCEEE------ECHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHhhhhcceEEecCceeeecCH-----------HHHHHHHHHHHHcCCeEE------CCcHHHHHHHHcCcHHHHH
Confidence 35555566779999998877665422 335688899999999875 2210 11111112556677
Q ss_pred HHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHh-CCCccEEEEeC-------CCcCcHHHHHHHHHHcCCCEE--eec
Q 012949 310 KELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAV-VPVEKLAVHLH-------DTYGQSLPNILISLQMGISTV--DCS 379 (452)
Q Consensus 310 ~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~-~p~~~l~vH~H-------nd~GlA~ANaLaAl~aGa~~V--D~S 379 (452)
+.+.+.|.+.|-+.|-.--+.++.-.++|+.+++. +.. ..++.-- -+...-+..+...++|||+.| ++-
T Consensus 92 ~~~k~lGf~~iEiS~G~i~l~~~~~~~~I~~~~~~G~~v-~~EvG~k~~~~~~~~~~~~~I~~~~~~LeAGA~~ViiEar 170 (251)
T 1qwg_A 92 NECEKLGFEAVEISDGSSDISLEERNNAIKRAKDNGFMV-LTEVGKKMPDKDKQLTIDDRIKLINFDLDAGADYVIIEGR 170 (251)
T ss_dssp HHHHHHTCCEEEECCSSSCCCHHHHHHHHHHHHHTTCEE-EEEECCSSHHHHTTCCHHHHHHHHHHHHHHTCSEEEECCT
T ss_pred HHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHCCCEE-eeeccccCCcccCCCCHHHHHHHHHHHHHCCCcEEEEeee
Confidence 88888899999999999999999999999999887 321 2333322 234455677888999999965 442
Q ss_pred ----ccCCCCCCCCCCCCCcccHHHHHHHHHcCC
Q 012949 380 ----VAGLGGCPYAKGASGNVATEDVVYMLSGLG 409 (452)
Q Consensus 380 ----v~GlGecP~a~graGNaalE~vv~~L~~~G 409 (452)
..|+=+ ..|+.-.+.+-..+..++
T Consensus 171 EsG~~iGi~~------~~g~~r~d~v~~i~~~l~ 198 (251)
T 1qwg_A 171 ESGKGKGLFD------KEGKVKENELDVLAKNVD 198 (251)
T ss_dssp TTCCSSTTBC------TTSCBCHHHHHHHHTTSC
T ss_pred cccCCcccCC------CCCCCcHHHHHHHHHhCC
Confidence 225656 788998888766665443
No 142
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=93.85 E-value=0.36 Score=45.74 Aligned_cols=167 Identities=12% Similarity=0.060 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHCCCCEEEE----ecCCCCCcccccCCHHHHHHHHHhcc-CCceeEE--ecchhhhhhhhhhhhhccch
Q 012949 148 GVKVELIRRLVSSGLPVVEA----TSFVSPKWVPQLADARDVMEAVRDLE-GARLPVL--TPNLKVILQRSILFQQCHAS 220 (452)
Q Consensus 148 ~~k~~i~~~L~~~Gv~~IEv----G~~~s~~~~p~~~D~e~v~~~i~~~~-~~~l~~l--~~~~~~~i~r~~~~~~~~~~ 220 (452)
....+-++.+.++|++.+.+ |.|+ |.+.--..+++.+++.. +..+-+. +-+-.
T Consensus 18 ~~l~~~i~~~~~~g~d~iHvDvmDg~fv-----pn~t~G~~~v~~lr~~~p~~~~dvhLmv~dp~--------------- 77 (227)
T 1tqx_A 18 SKLAEETQRMESLGAEWIHLDVMDMHFV-----PNLSFGPPVINNLKKYTKSIFFDVHLMVEYPE--------------- 77 (227)
T ss_dssp GGHHHHHHHHHHTTCSEEEEEEEBSSSS-----SCBCCCHHHHHHHGGGCSSCEEEEEEESSCGG---------------
T ss_pred hhHHHHHHHHHHcCCCEEEEEEEeCCcC-----cchhcCHHHHHHHHHhCCCCcEEEEEEEcCHH---------------
Confidence 34455667778899997444 4443 44433346778888765 5444432 11111
Q ss_pred hhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHH---HHHhCCCcEEEEEEeeecCCCC
Q 012949 221 VISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAH---AAKVLSIPVRGYVSCVVGCPVE 297 (452)
Q Consensus 221 ~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~---~Ak~~G~~V~~~l~~~~g~p~~ 297 (452)
+-++..++ ++.+.+..-+.+. .+.+.++ .+|+.|.++.+.+. |.
T Consensus 78 ----------~~i~~~~~--Ad~itvH~ea~~~---------------~~~~~i~~~~~i~~~G~k~gvaln-----p~- 124 (227)
T 1tqx_A 78 ----------KYVPLLKT--SNQLTFHFEALNE---------------DTERCIQLAKEIRDNNLWCGISIK-----PK- 124 (227)
T ss_dssp ----------GGGGGCTT--SSEEEEEGGGGTT---------------CHHHHHHHHHHHHTTTCEEEEEEC-----TT-
T ss_pred ----------HHHHHHHh--CCEEEEeecCCcc---------------CHHHHHHHHHHHHHcCCeEEEEeC-----CC-
Confidence 02222233 6777666543321 1234556 89999999875442 21
Q ss_pred CCCCHHHHHHHHHHHHHCC-cCEEEE----cCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcC
Q 012949 298 GAIPPSKVAYVAKELHDMG-CFEISL----GDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMG 372 (452)
Q Consensus 298 ~r~d~e~l~~~a~~l~~~G-ad~I~L----~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aG 372 (452)
++.+. ++.+.++| +|.|.+ +-..|...+....+.|+.+++..++.+|++ |-|....|+-.++++|
T Consensus 125 --tp~~~----~~~~l~~g~~D~VlvmsV~pGf~gq~f~~~~l~ki~~lr~~~~~~~I~V----dGGI~~~ti~~~~~aG 194 (227)
T 1tqx_A 125 --TDVQK----LVPILDTNLINTVLVMTVEPGFGGQSFMHDMMGKVSFLRKKYKNLNIQV----DGGLNIETTEISASHG 194 (227)
T ss_dssp --SCGGG----GHHHHTTTCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCTTCEEEE----ESSCCHHHHHHHHHHT
T ss_pred --CcHHH----HHHHhhcCCcCEEEEeeeccCCCCcccchHHHHHHHHHHHhccCCeEEE----ECCCCHHHHHHHHHcC
Confidence 22333 34445555 888732 233344445566777888888776545555 6688888999999999
Q ss_pred CCEEe
Q 012949 373 ISTVD 377 (452)
Q Consensus 373 a~~VD 377 (452)
|+.+=
T Consensus 195 Ad~~V 199 (227)
T 1tqx_A 195 ANIIV 199 (227)
T ss_dssp CCEEE
T ss_pred CCEEE
Confidence 99653
No 143
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=93.81 E-value=1.9 Score=41.56 Aligned_cols=181 Identities=16% Similarity=0.196 Sum_probs=109.2
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEecCCCCCccc-ccCC-HHHHHHHHHhc-cCCceeEEecchhhhhhhhhhhhhccchh
Q 012949 145 VPTGVKVELIRRLVSSGLPVVEATSFVSPKWVP-QLAD-ARDVMEAVRDL-EGARLPVLTPNLKVILQRSILFQQCHASV 221 (452)
Q Consensus 145 ~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p-~~~D-~e~v~~~i~~~-~~~~l~~l~~~~~~~i~r~~~~~~~~~~~ 221 (452)
=+.+.-+++++.|.++|.+.+=.++|- |+-.| ++.. .++-++.+++. ....+++++--..
T Consensus 34 ~~~e~a~~~a~~l~~~Ga~~vk~~~fk-prts~~~~~g~~~egl~~l~~~~~~~Gl~~~te~~d---------------- 96 (262)
T 1zco_A 34 ESREQIMKVAEFLAEVGIKVLRGGAFK-PRTSPYSFQGYGEKALRWMREAADEYGLVTVTEVMD---------------- 96 (262)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEECBSSC-CCSSTTSCCCCTHHHHHHHHHHHHHHTCEEEEECCC----------------
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEecc-cCCCcccccCccHHHHHHHHHHHHHcCCcEEEeeCC----------------
Confidence 378999999999999999999888762 21111 1100 02334444432 2223444432111
Q ss_pred hhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCC-
Q 012949 222 ISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAI- 300 (452)
Q Consensus 222 i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~- 300 (452)
...++.+.+. ++.+.|....-. .. .+++++-+.|.+|. |+. +..
T Consensus 97 --------~~~~~~l~~~-vd~~kIga~~~~-------------n~----~ll~~~a~~~kPV~--lk~-------G~~~ 141 (262)
T 1zco_A 97 --------TRHVELVAKY-SDILQIGARNSQ-------------NF----ELLKEVGKVENPVL--LKR-------GMGN 141 (262)
T ss_dssp --------GGGHHHHHHH-CSEEEECGGGTT-------------CH----HHHHHHTTSSSCEE--EEC-------CTTC
T ss_pred --------HHhHHHHHhh-CCEEEECccccc-------------CH----HHHHHHHhcCCcEE--Eec-------CCCC
Confidence 1267777777 898888653211 01 23344445899886 332 233
Q ss_pred CHHHHHHHHHHHHHCCcCEEEEcC----Cc-CCCcHHHHH-HHHHHHHHhCCCccE-EEEeCCCcCc---HHHHHHHHHH
Q 012949 301 PPSKVAYVAKELHDMGCFEISLGD----TI-GVGTPGTVV-PMLEAVMAVVPVEKL-AVHLHDTYGQ---SLPNILISLQ 370 (452)
Q Consensus 301 d~e~l~~~a~~l~~~Gad~I~L~D----T~-G~~~P~~v~-~li~~l~~~~p~~~l-~vH~Hnd~Gl---A~ANaLaAl~ 370 (452)
+++.+...++.+...|...+.|+- +. ++ .+..+. ..+..+++.+.. +| ..=.|. .|. ...-+.+|+.
T Consensus 142 t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y-~~~~v~L~ai~~lk~~~~~-pVi~d~sH~-~g~~~~v~~~~~aAva 218 (262)
T 1zco_A 142 TIQELLYSAEYIMAQGNENVILCERGIRTFETA-TRFTLDISAVPVVKELSHL-PIIVDPSHP-AGRRSLVIPLAKAAYA 218 (262)
T ss_dssp CHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCS-SSSBCCTTHHHHHHHHBSS-CEEECSSTT-TCSGGGHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCc-ChhhcCHHHHHHHHhhhCC-CEEEEcCCC-CCccchHHHHHHHHHH
Confidence 789999999999999987777766 43 44 444444 456777776532 44 444454 233 2355777999
Q ss_pred cCCC--EEeecc
Q 012949 371 MGIS--TVDCSV 380 (452)
Q Consensus 371 aGa~--~VD~Sv 380 (452)
.||+ +|+.=+
T Consensus 219 ~Ga~Gl~iE~H~ 230 (262)
T 1zco_A 219 IGADGIMVEVHP 230 (262)
T ss_dssp TTCSEEEEEBCS
T ss_pred cCCCEEEEEecC
Confidence 9999 888764
No 144
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=93.78 E-value=5.2 Score=38.99 Aligned_cols=192 Identities=17% Similarity=0.177 Sum_probs=107.5
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHH---hccCCceeEEe----cchhhhhhhhhhhhh
Q 012949 144 TVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVR---DLEGARLPVLT----PNLKVILQRSILFQQ 216 (452)
Q Consensus 144 ~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~---~~~~~~l~~l~----~~~~~~i~r~~~~~~ 216 (452)
.++.+.-.++++.|.+.|++.|-+.--.. -.+.+. .+|-.+.++ +..+-++++++ .+.+
T Consensus 21 ~iD~~~l~~lv~~li~~Gv~gl~v~GttG--E~~~Ls-~~Er~~v~~~~~~~~~grvpviaGvg~~~t~----------- 86 (300)
T 3eb2_A 21 RVRADVMGRLCDDLIQAGVHGLTPLGSTG--EFAYLG-TAQREAVVRATIEAAQRRVPVVAGVASTSVA----------- 86 (300)
T ss_dssp CBCHHHHHHHHHHHHHTTCSCBBTTSGGG--TGGGCC-HHHHHHHHHHHHHHHTTSSCBEEEEEESSHH-----------
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECcccc--CccccC-HHHHHHHHHHHHHHhCCCCcEEEeCCCCCHH-----------
Confidence 57999999999999999999876532111 123342 233333333 32222333322 2222
Q ss_pred ccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCC
Q 012949 217 CHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPV 296 (452)
Q Consensus 217 ~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~ 296 (452)
+ ..+-.+.|.++|+|-+.+..+- + ++.|.++.++-++.+.+ ..++++..|= .|.
T Consensus 87 ---~--------ai~la~~a~~~Gadavlv~~P~---y----~~~~~~~l~~~f~~va~---a~~lPiilYn-----~P~ 140 (300)
T 3eb2_A 87 ---D--------AVAQAKLYEKLGADGILAILEA---Y----FPLKDAQIESYFRAIAD---AVEIPVVIYT-----NPQ 140 (300)
T ss_dssp ---H--------HHHHHHHHHHHTCSEEEEEECC---S----SCCCHHHHHHHHHHHHH---HCSSCEEEEE-----CTT
T ss_pred ---H--------HHHHHHHHHHcCCCEEEEcCCC---C----CCCCHHHHHHHHHHHHH---HCCCCEEEEE-----Ccc
Confidence 1 1235567788999999887652 1 22355666655544443 3468876432 343
Q ss_pred CC--CCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEE-EeCCCcCcHHHHHHHHHHcCC
Q 012949 297 EG--AIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAV-HLHDTYGQSLPNILISLQMGI 373 (452)
Q Consensus 297 ~~--r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~v-H~Hnd~GlA~ANaLaAl~aGa 373 (452)
.+ ..+++.+.+++ +. ...+.++||.| ...++.++++.... .+.+ -++|+ ..+.++.+|+
T Consensus 141 ~tg~~l~~~~~~~La----~~-pnIvgiKdssg--d~~~~~~~~~~~~~-----~f~v~~G~d~------~~~~~l~~G~ 202 (300)
T 3eb2_A 141 FQRSDLTLDVIARLA----EH-PRIRYIKDAST--NTGRLLSIINRCGD-----ALQVFSASAH------IPAAVMLIGG 202 (300)
T ss_dssp TCSSCCCHHHHHHHH----TS-TTEEEEEECSS--BHHHHHHHHHHHGG-----GSEEEECTTS------CHHHHHHTTC
T ss_pred ccCCCCCHHHHHHHH----cC-CCEEEEEcCCC--CHHHHHHHHHHcCC-----CeEEEeCcHH------HHHHHHhCCC
Confidence 32 35666666553 33 57899999987 45666666654432 2333 44443 2366788897
Q ss_pred CEEeecccCCCCCCCCCCCCCcccHHHHHHHHH
Q 012949 374 STVDCSVAGLGGCPYAKGASGNVATEDVVYMLS 406 (452)
Q Consensus 374 ~~VD~Sv~GlGecP~a~graGNaalE~vv~~L~ 406 (452)
+ +.+.| .+|..-+.++...+
T Consensus 203 ~---G~is~----------~an~~P~~~~~l~~ 222 (300)
T 3eb2_A 203 V---GWMAG----------PACIAPRQSVALYE 222 (300)
T ss_dssp C---EEEEG----------GGGTCHHHHHHHHH
T ss_pred C---EEEeC----------hhhhhHHHHHHHHH
Confidence 6 44443 34555555555544
No 145
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=93.78 E-value=2.9 Score=38.84 Aligned_cols=209 Identities=11% Similarity=0.025 Sum_probs=109.2
Q ss_pred HHHHHHHHHHCCCCEEEEecCCCCCcccccCCH---HHHHHHHHhccCCceeEEecchhhhhhhhhhhhhccchhhhhhh
Q 012949 150 KVELIRRLVSSGLPVVEATSFVSPKWVPQLADA---RDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNL 226 (452)
Q Consensus 150 k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~---e~v~~~i~~~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~ 226 (452)
-.+.++.+.++|++.||+....- |.-.+. +++.+.+++ .++++.++.+..... ++
T Consensus 32 ~~~~l~~~~~~G~~~vEl~~~~~----~~~~~~~~~~~~~~~l~~-~gl~i~~~~~~~~~~--------------~~--- 89 (257)
T 3lmz_A 32 LDTTLKTLERLDIHYLCIKDFHL----PLNSTDEQIRAFHDKCAA-HKVTGYAVGPIYMKS--------------EE--- 89 (257)
T ss_dssp HHHHHHHHHHTTCCEEEECTTTS----CTTCCHHHHHHHHHHHHH-TTCEEEEEEEEEECS--------------HH---
T ss_pred HHHHHHHHHHhCCCEEEEecccC----CCCCCHHHHHHHHHHHHH-cCCeEEEEeccccCC--------------HH---
Confidence 35677788899999999975421 111122 233333332 456665554321100 00
Q ss_pred hccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHH
Q 012949 227 WVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVA 306 (452)
Q Consensus 227 ~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~ 306 (452)
...+.++.|.+.|++.|.+... .+.+.++.++|++.|+.+. +... +.+...-.+++.+.
T Consensus 90 -~~~~~i~~A~~lGa~~v~~~p~-----------------~~~l~~l~~~a~~~gv~l~--lEn~-~~~~~~~~~~~~~~ 148 (257)
T 3lmz_A 90 -EIDRAFDYAKRVGVKLIVGVPN-----------------YELLPYVDKKVKEYDFHYA--IHLH-GPDIKTYPDATDVW 148 (257)
T ss_dssp -HHHHHHHHHHHHTCSEEEEEEC-----------------GGGHHHHHHHHHHHTCEEE--EECC-CTTCSSSCSHHHHH
T ss_pred -HHHHHHHHHHHhCCCEEEecCC-----------------HHHHHHHHHHHHHcCCEEE--EecC-CCcccccCCHHHHH
Confidence 0124788899999999997532 1334567788999998754 3321 00111123566666
Q ss_pred HHHHHHHHCCcCEEEEcCCcCCCcHH-HHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEeecccCCCC
Q 012949 307 YVAKELHDMGCFEISLGDTIGVGTPG-TVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCSVAGLGG 385 (452)
Q Consensus 307 ~~a~~l~~~Gad~I~L~DT~G~~~P~-~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~Sv~GlGe 385 (452)
++++. .....=..-|+.=...-. ...+.++.+.. -...+|.+|..+- +-.. .-..+
T Consensus 149 ~ll~~---~~p~vg~~~D~~h~~~~g~d~~~~l~~~~~----~i~~vHl~D~~~~-----------~~~~---~~~~~-- 205 (257)
T 3lmz_A 149 VHTKD---LDPRIGMCLDVGHDLRNGCDPVADLKKYHT----RVFDMHIKDVTDS-----------SKAG---VGIEI-- 205 (257)
T ss_dssp HHHTT---SCTTEEEEEEHHHHHHTTCCHHHHHHHHGG----GEEEEEECEESCS-----------STTC---CEECT--
T ss_pred HHHHh---CCCCccEEEchhhHHHcCCCHHHHHHHhhc----ceeEEeecccccc-----------cCCC---Ccccc--
Confidence 66652 233322233653221100 12333333332 2467999998761 0000 00112
Q ss_pred CCCCCCCCCcccHHHHHHHHHcCCCCC----CC------ChhhHHHHHHHHHHHh
Q 012949 386 CPYAKGASGNVATEDVVYMLSGLGVET----NV------DLRKLMLAGDFINKHL 430 (452)
Q Consensus 386 cP~a~graGNaalE~vv~~L~~~Gi~t----~i------Dl~~L~~la~~v~~~~ 430 (452)
+.|..+...++..|+..|++- .+ ..+.+.+..+++.+.+
T Consensus 206 ------G~G~id~~~~~~~L~~~gy~g~~~lE~~~~~~~~~~~~~~s~~~l~~~l 254 (257)
T 3lmz_A 206 ------GRGKIDFPALIRMMREVNYTGMCSLEYEKDMKDPFLGIAESIGYFKAVS 254 (257)
T ss_dssp ------TSSSCCHHHHHHHHHHTTCCSEEEECCCSSTTSCHHHHHHHHHHHHHHH
T ss_pred ------CCCccCHHHHHHHHHHcCCCceEEEEecCCcCCHHHHHHHHHHHHHHHh
Confidence 257899999999999866542 12 2345555555655543
No 146
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=93.75 E-value=2.3 Score=42.45 Aligned_cols=134 Identities=12% Similarity=0.120 Sum_probs=90.7
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHH-hCCCcEEEEEEeeecCCCCCCCCHHHHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAK-VLSIPVRGYVSCVVGCPVEGAIPPSKVAYVA 309 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak-~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a 309 (452)
+-++.+.+-|+..+-++.. +. .-..-|.+.++.++.+.+.++.++ +.|+.++.-+++. -..+++...+.+
T Consensus 85 ~~l~~~~~dgV~y~Eir~~--P~-~~~~~gl~~~~~v~~v~~~~~~a~~~~gi~~~lI~~~~------R~~~~~~a~~~l 155 (343)
T 3rys_A 85 AYLERAAAGGVRHAEIMMD--PQ-AHTSRGVALETCVNGVANALATSEEDFGVSTLLIAAFL------RDMSEDSALEVL 155 (343)
T ss_dssp HHHHHHHHTTEEEEEEEEC--HH-HHHTTTCCHHHHHHHHHHHHTTHHHHHSCEEEEEEEEE------TTSCHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEEec--HH-HhccCCCCHHHHHHHHHHHHHHHhhcCceeEEEEEEeC------CCCCHHHHHHHH
Confidence 4667788889998888763 32 222457899999998888887765 4788777544432 124567766776
Q ss_pred HHHHHC--CcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHH-cCCCEEe
Q 012949 310 KELHDM--GCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQ-MGISTVD 377 (452)
Q Consensus 310 ~~l~~~--Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~-aGa~~VD 377 (452)
+.+.++ ++..|-|+-.-....|....+.++..++. +.++.+|+..+.+ ..+...|+. .|+++|+
T Consensus 156 ~~a~~~~~~vvG~dL~g~E~~~~~~~~~~~~~~A~~~--gl~~~~HagE~~~--~~~i~~al~~lg~~rIg 222 (343)
T 3rys_A 156 DQLLAMHAPIAGIGLDSAEVGNPPSKFERLYQRAAEA--GLRRIAHAGEEGP--ASYITEALDVLHVERID 222 (343)
T ss_dssp HHHHHTTCCCCEEEEESCCTTCCGGGGHHHHHHHHHT--TCEEEEEESSSSC--HHHHHHHHHTSCCSEEE
T ss_pred HHHHhCCCCEEEEecCCcccCCCHHHHHHHHHHHHHC--CCeEEEeeCCCCC--HHHHHHHHhcCCcceee
Confidence 666655 35555554333344677788877766653 4578889987754 467788997 9999874
No 147
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=93.74 E-value=0.25 Score=47.97 Aligned_cols=178 Identities=17% Similarity=0.137 Sum_probs=89.6
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEecCCC-CC-ccccc-----------CCHHHHHHHHH---hccCCceeEEe-cchhhh
Q 012949 145 VPTGVKVELIRRLVSSGLPVVEATSFVS-PK-WVPQL-----------ADARDVMEAVR---DLEGARLPVLT-PNLKVI 207 (452)
Q Consensus 145 ~~~~~k~~i~~~L~~~Gv~~IEvG~~~s-~~-~~p~~-----------~D~e~v~~~i~---~~~~~~l~~l~-~~~~~~ 207 (452)
.+.+.-+++++.|.+. +|.||+|.|-+ |. ..|.. ...+.+++.++ +..++.+..+. .|.
T Consensus 27 P~~~~~~~~~~~l~~~-aD~IElG~PfsdP~adGp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~~~~Pii~m~y~n~--- 102 (271)
T 1ujp_A 27 PSREGFLQAVEEVLPY-ADLLEIGLPYSDPLGDGPVIQRASELALRKGMSVQGALELVREVRALTEKPLFLMTYLNP--- 102 (271)
T ss_dssp SCHHHHHHHHHHHGGG-CSSEEEECCCCC----CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCCSCEEEECCHHH---
T ss_pred CChHHHHHHHHHHHhc-CCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEEEEecCcH---
Confidence 4667888999999999 99999998654 31 00100 01122233333 22233332221 110
Q ss_pred hhhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEE
Q 012949 208 LQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGY 287 (452)
Q Consensus 208 i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~ 287 (452)
+ | +....+.++.+.++|++.+-+..-.. +.+.+.++.++++|+....
T Consensus 103 v-----~-----------~~g~~~f~~~~~~aG~dGviv~Dl~~----------------ee~~~~~~~~~~~gl~~i~- 149 (271)
T 1ujp_A 103 V-----L-----------AWGPERFFGLFKQAGATGVILPDLPP----------------DEDPGLVRLAQEIGLETVF- 149 (271)
T ss_dssp H-----H-----------HHCHHHHHHHHHHHTCCEEECTTCCG----------------GGCHHHHHHHHHHTCEEEC-
T ss_pred H-----H-----------HhhHHHHHHHHHHcCCCEEEecCCCH----------------HHHHHHHHHHHHcCCceEE-
Confidence 0 0 11223578889999999776653221 2334667888999986431
Q ss_pred EEeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEc---CCcCCCcH--HHHHHHHHHHHHhCCCccEEEEeCCCcCcHH
Q 012949 288 VSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLG---DTIGVGTP--GTVVPMLEAVMAVVPVEKLAVHLHDTYGQSL 362 (452)
Q Consensus 288 l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~---DT~G~~~P--~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ 362 (452)
++ .| .++.+.+..+++.. .| -+++. -++|.-+. ..+.++++.+++.. +.++.+= +|...
T Consensus 150 li----ap---~s~~eri~~ia~~~--~g--fiy~vs~~G~TG~~~~~~~~~~~~v~~vr~~~-~~Pv~vG----fGI~t 213 (271)
T 1ujp_A 150 LL----AP---TSTDARIATVVRHA--TG--FVYAVSVTGVTGMRERLPEEVKDLVRRIKART-ALPVAVG----FGVSG 213 (271)
T ss_dssp EE----CT---TCCHHHHHHHHTTC--CS--CEEEECC------------CCHHHHHHHHTTC-CSCEEEE----SCCCS
T ss_pred Ee----CC---CCCHHHHHHHHHhC--CC--CEEEEecCcccCCCCCCCccHHHHHHHHHhhc-CCCEEEE----cCCCC
Confidence 22 11 23455555555432 23 23332 24444332 33467889998865 3455432 34443
Q ss_pred HHHHHHHHcCCCEE
Q 012949 363 PNILISLQMGISTV 376 (452)
Q Consensus 363 ANaLaAl~aGa~~V 376 (452)
......+ +|||.|
T Consensus 214 ~e~a~~~-~~ADgV 226 (271)
T 1ujp_A 214 KATAAQA-AVADGV 226 (271)
T ss_dssp HHHHHHH-TTSSEE
T ss_pred HHHHHHh-cCCCEE
Confidence 4444445 888744
No 148
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=93.69 E-value=2.3 Score=39.65 Aligned_cols=95 Identities=17% Similarity=0.124 Sum_probs=56.8
Q ss_pred HHHHHHHHHHCCcCEEEEcCC--cCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcH-HHHHHHHHHcCCCEEeeccc
Q 012949 305 VAYVAKELHDMGCFEISLGDT--IGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQS-LPNILISLQMGISTVDCSVA 381 (452)
Q Consensus 305 l~~~a~~l~~~Gad~I~L~DT--~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA-~ANaLaAl~aGa~~VD~Sv~ 381 (452)
..+.++.+.+.|++.|.+.++ .|..... -.++++.+++.++ +|+-.- -|.. ..+....+++||+.|=+.=.
T Consensus 154 ~~e~~~~~~~~G~~~i~~~~~~~~g~~~g~-~~~~i~~l~~~~~-ipvia~----GGI~~~~d~~~~~~~Gadgv~vgsa 227 (252)
T 1ka9_F 154 AVEWAVKGVELGAGEILLTSMDRDGTKEGY-DLRLTRMVAEAVG-VPVIAS----GGAGRMEHFLEAFQAGAEAALAASV 227 (252)
T ss_dssp HHHHHHHHHHHTCCEEEEEETTTTTTCSCC-CHHHHHHHHHHCS-SCEEEE----SCCCSHHHHHHHHHTTCSEEEESHH
T ss_pred HHHHHHHHHHcCCCEEEEecccCCCCcCCC-CHHHHHHHHHHcC-CCEEEe----CCCCCHHHHHHHHHCCCHHHHHHHH
Confidence 345667777789998888643 2332221 1556777777653 244332 3444 37777778889886532211
Q ss_pred CCCCCCCCCCCCCcccHHHHHHHHHcCCCCCCC
Q 012949 382 GLGGCPYAKGASGNVATEDVVYMLSGLGVETNV 414 (452)
Q Consensus 382 GlGecP~a~graGNaalE~vv~~L~~~Gi~t~i 414 (452)
=+ .+.-+.+++...|+..|+....
T Consensus 228 l~---------~~~~~~~~~~~~l~~~~~~~~~ 251 (252)
T 1ka9_F 228 FH---------FGEIPIPKLKRYLAEKGVHVRL 251 (252)
T ss_dssp HH---------TTSSCHHHHHHHHHHTTCCBCC
T ss_pred HH---------cCCCCHHHHHHHHHHCCCCcCC
Confidence 11 1234788888888888875543
No 149
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=93.65 E-value=5.5 Score=38.68 Aligned_cols=196 Identities=17% Similarity=0.222 Sum_probs=110.5
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCH--HHHHHHHHhccCCceeEEe----cchhhhhhhhhhhhhc
Q 012949 144 TVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADA--RDVMEAVRDLEGARLPVLT----PNLKVILQRSILFQQC 217 (452)
Q Consensus 144 ~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~--e~v~~~i~~~~~~~l~~l~----~~~~~~i~r~~~~~~~ 217 (452)
.++.+.-.++++.|.+.|++.|-+.--.. -.+.+.+. .++++.+.+..+-++++++ .+.+
T Consensus 19 ~iD~~~l~~lv~~li~~Gv~gl~v~GttG--E~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~------------ 84 (292)
T 3daq_A 19 KVNLEALKAHVNFLLENNAQAIIVNGTTA--ESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTE------------ 84 (292)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEESSGGG--TGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHH------------
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECcccc--ccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHH------------
Confidence 46889999999999999999987742111 12333221 2334433332222334332 1221
Q ss_pred cchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCC-
Q 012949 218 HASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPV- 296 (452)
Q Consensus 218 ~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~- 296 (452)
+ ..+-.+.|.++|+|-+.+..+- + ++-|.++.++-++.+.+.+ ++++..|= .|.
T Consensus 85 --~--------ai~la~~a~~~Gadavlv~~P~---y----~~~~~~~l~~~f~~ia~a~---~lPiilYn-----~P~~ 139 (292)
T 3daq_A 85 --K--------SIQASIQAKALGADAIMLITPY---Y----NKTNQRGLVKHFEAIADAV---KLPVVLYN-----VPSR 139 (292)
T ss_dssp --H--------HHHHHHHHHHHTCSEEEEECCC---S----SCCCHHHHHHHHHHHHHHH---CSCEEEEE-----CHHH
T ss_pred --H--------HHHHHHHHHHcCCCEEEECCCC---C----CCCCHHHHHHHHHHHHHhC---CCCEEEEe-----cccc
Confidence 1 1234567788899999887652 1 2235566666565555444 78876433 232
Q ss_pred -CCCCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCE
Q 012949 297 -EGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGIST 375 (452)
Q Consensus 297 -~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~ 375 (452)
....+++.+.++++ . ...+.++||.|- ..++. .+++..|+..+.+-.=+| ...+.++.+|++
T Consensus 140 tg~~l~~~~~~~La~----~-pnivgiK~ssgd--~~~~~----~~~~~~~~~~f~v~~G~d-----~~~~~~l~~G~~- 202 (292)
T 3daq_A 140 TNMTIEPETVEILSQ----H-PYIVALKDATND--FEYLE----EVKKRIDTNSFALYSGND-----DNVVEYYQRGGQ- 202 (292)
T ss_dssp HSCCCCHHHHHHHHT----S-TTEEEEEECCCC--HHHHH----HHHTTSCTTTSEEEESCG-----GGHHHHHHTTCC-
T ss_pred cCCCCCHHHHHHHhc----C-CCEEEEEeCCCC--HHHHH----HHHHHCCCCCEEEEECCH-----HHHHHHHhcCCC-
Confidence 22456777766653 2 579999999884 34443 444555542344433333 235667889985
Q ss_pred EeecccCCCCCCCCCCCCCcccHHHHHHHHHc
Q 012949 376 VDCSVAGLGGCPYAKGASGNVATEDVVYMLSG 407 (452)
Q Consensus 376 VD~Sv~GlGecP~a~graGNaalE~vv~~L~~ 407 (452)
+.+.| .+|..-+.++...+.
T Consensus 203 --G~is~----------~~n~~P~~~~~l~~a 222 (292)
T 3daq_A 203 --GVISV----------IANVIPKEFQALYDA 222 (292)
T ss_dssp --EEEES----------GGGTCHHHHHHHHHH
T ss_pred --EEEeC----------HHHhhHHHHHHHHHH
Confidence 44443 345666666665553
No 150
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=93.64 E-value=1.2 Score=43.32 Aligned_cols=143 Identities=8% Similarity=0.025 Sum_probs=72.8
Q ss_pred HhHHHHHHcCCCEEEEEecCChH--HHhh-h------------cCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCC
Q 012949 231 QGFEAAIAAGAKEVAIFASASEA--FSKS-N------------INCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCP 295 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~--~~~~-~------------~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p 295 (452)
+.++.|.+.|++.|..... +.. +... . .....+...+.+.++.++|++.|+.+. +...-..+
T Consensus 113 ~~i~~A~~lG~~~v~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~--lE~~~~~~ 189 (335)
T 2qw5_A 113 SRVDITAALGGEIMMGPIV-IPYGVFPTTDFNEPIWSDELQEHLKVRYANAQPILDKLGEYAEIKKVKLA--IEPITHWE 189 (335)
T ss_dssp HHHHHHHHTTCSEEEECCS-SCTTCCCBCTTCCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEE--ECCCCTTT
T ss_pred HHHHHHHHcCCCEEecccc-CccccccCCcccccccccchhhhHHHHHHHHHHHHHHHHHHHHHcCCEEE--EeeCCccc
Confidence 4778888999999832110 100 0000 0 001234556667778889999997654 33210001
Q ss_pred CCCCCCHHHHHHHHHHHHHCCcCEEE-EcCCcCC----CcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHH
Q 012949 296 VEGAIPPSKVAYVAKELHDMGCFEIS-LGDTIGV----GTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQ 370 (452)
Q Consensus 296 ~~~r~d~e~l~~~a~~l~~~Gad~I~-L~DT~G~----~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~ 370 (452)
...-.+++.+.+++ .+.+.+.+. .-||.=. ..|..+.+.++.+... +-...+|++|..
T Consensus 190 ~~~~~t~~~~~~ll---~~v~~~~vgl~~D~~H~~~~g~d~~~~~~~l~~~~~~--~ri~~vHlkD~~------------ 252 (335)
T 2qw5_A 190 TPGPNKLSQLIEFL---KGVKSKQVGVVIDSAHEILDGEGPEIFKTQVEYLAQQ--GRLHYVQVSPPD------------ 252 (335)
T ss_dssp CSSCCSHHHHHHHH---TTCCCTTEEEEEEHHHHHHHCCCHHHHHHHHHHHHHH--TCEEEEEECCTT------------
T ss_pred ccccCCHHHHHHHH---HhcCCCCeeEEEecccchhccCChHHHHHHHHHhCCc--CCEEEEEECCCC------------
Confidence 11122455555544 334433222 2376311 2343332444444310 224689999852
Q ss_pred cCCCEEeecccCCCCCCCCCCCCCcccHHHHHHHHHcCCCC
Q 012949 371 MGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVE 411 (452)
Q Consensus 371 aGa~~VD~Sv~GlGecP~a~graGNaalE~vv~~L~~~Gi~ 411 (452)
. .-+| .|.++.+.++..|+. |++
T Consensus 253 ------~---~~~G--------~G~id~~~i~~~L~~-gy~ 275 (335)
T 2qw5_A 253 ------R---GALH--------TSWLPWKSFLTPIVK-VYD 275 (335)
T ss_dssp ------S---SCSS--------SSCCCHHHHHHHHHH-HCC
T ss_pred ------C---CCCC--------CCCcCHHHHHHHHHc-cCC
Confidence 0 1222 478999999999998 764
No 151
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=93.64 E-value=0.88 Score=45.88 Aligned_cols=139 Identities=14% Similarity=0.056 Sum_probs=86.2
Q ss_pred hHHHHHHcCCCEEEEEecC--------ChHHH--hhhcCCCHHHHHHHHHHHHHHHHhC-CC-cEEEEEEee-ecCCCCC
Q 012949 232 GFEAAIAAGAKEVAIFASA--------SEAFS--KSNINCSIEDSLVRYRAVAHAAKVL-SI-PVRGYVSCV-VGCPVEG 298 (452)
Q Consensus 232 ~ie~a~~~Gi~~V~i~~s~--------Sd~~~--~~~~~~s~e~~l~~~~~~v~~Ak~~-G~-~V~~~l~~~-~g~p~~~ 298 (452)
..+.|.++|.|.|.|-..- |+..+ ....|-|.++=.+.+.++++.+|+. |- .|.+-|+.. +-.....
T Consensus 166 aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~~~~~~~~~~ 245 (365)
T 2gou_A 166 AALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTTLNGTVD 245 (365)
T ss_dssp HHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCCTTSCCC
T ss_pred HHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEEccccccCCCCC
Confidence 4556788999999986532 23211 2235667777777777777777763 33 555444421 0000112
Q ss_pred CCCHHHHHHHHHHHHHCCcCEEEEcCCc--C-CCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcC-CC
Q 012949 299 AIPPSKVAYVAKELHDMGCFEISLGDTI--G-VGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMG-IS 374 (452)
Q Consensus 299 r~d~e~l~~~a~~l~~~Gad~I~L~DT~--G-~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aG-a~ 374 (452)
..+.+...++++.+.++|++.|.+.... + ...|. ++++.+++.++. +|..=. .. -..++..++++| ||
T Consensus 246 ~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~---~~~~~i~~~~~i-Pvi~~G--gi--~~~~a~~~l~~g~aD 317 (365)
T 2gou_A 246 ADPILTYTAAAALLNKHRIVYLHIAEVDWDDAPDTPV---SFKRALREAYQG-VLIYAG--RY--NAEKAEQAINDGLAD 317 (365)
T ss_dssp SSHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCH---HHHHHHHHHCCS-EEEEES--SC--CHHHHHHHHHTTSCS
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCCcCCCCCccH---HHHHHHHHHCCC-cEEEeC--CC--CHHHHHHHHHCCCcc
Confidence 3456788899999999999999886531 1 11232 567888888764 443322 12 367889999998 88
Q ss_pred EEee
Q 012949 375 TVDC 378 (452)
Q Consensus 375 ~VD~ 378 (452)
.|-.
T Consensus 318 ~V~i 321 (365)
T 2gou_A 318 MIGF 321 (365)
T ss_dssp EEEC
T ss_pred eehh
Confidence 7754
No 152
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=93.53 E-value=1.6 Score=41.76 Aligned_cols=101 Identities=14% Similarity=0.023 Sum_probs=60.5
Q ss_pred HHHHHHHHhCCCc-EEEEEEeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCc-------------------CCCc
Q 012949 271 RAVAHAAKVLSIP-VRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTI-------------------GVGT 330 (452)
Q Consensus 271 ~~~v~~Ak~~G~~-V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~-------------------G~~~ 330 (452)
.+..+.+|+.|-+ ..++|. .+..+.+...++++.+.++|+|.|-|.=.. ...+
T Consensus 5 ~~~f~~~~~~~~~~~i~~i~-------~g~p~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~ 77 (262)
T 2ekc_A 5 SDKFTELKEKREKALVSYLM-------VGYPDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIR 77 (262)
T ss_dssp HHHHHHHHHHTBCEEEEEEE-------TTSSCHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhcCCceEEEEec-------CCCCChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCC
Confidence 3444555555544 344453 233466788999999999999988773211 1134
Q ss_pred HHHHHHHHHHHHHhCCCccEEEEeCCC--cCcHHHH-HHHHHHcCCCEEee
Q 012949 331 PGTVVPMLEAVMAVVPVEKLAVHLHDT--YGQSLPN-ILISLQMGISTVDC 378 (452)
Q Consensus 331 P~~v~~li~~l~~~~p~~~l~vH~Hnd--~GlA~AN-aLaAl~aGa~~VD~ 378 (452)
...+.++++.+++.+|.+|+.+=.-.+ +..++.+ .-.+.++|++.+-.
T Consensus 78 ~~~~~~~v~~ir~~~~~~Pi~~m~y~n~v~~~g~~~f~~~~~~aG~dgvii 128 (262)
T 2ekc_A 78 FEDVLELSETLRKEFPDIPFLLMTYYNPIFRIGLEKFCRLSREKGIDGFIV 128 (262)
T ss_dssp HHHHHHHHHHHHHHCTTSCEEEECCHHHHHHHCHHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHHHHhhcCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEE
Confidence 466778899999988677777621101 0111122 23366899986554
No 153
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=93.45 E-value=0.59 Score=43.02 Aligned_cols=157 Identities=17% Similarity=0.097 Sum_probs=86.0
Q ss_pred HHHHHHHHHHCCCCEEEEecCC-CCCcccccCCH---HHHHHHHHhccC-CceeEEecchhhhhhhhhhhhhccchhhhh
Q 012949 150 KVELIRRLVSSGLPVVEATSFV-SPKWVPQLADA---RDVMEAVRDLEG-ARLPVLTPNLKVILQRSILFQQCHASVISS 224 (452)
Q Consensus 150 k~~i~~~L~~~Gv~~IEvG~~~-s~~~~p~~~D~---e~v~~~i~~~~~-~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~ 224 (452)
-.+.++.+.+.|++.|++..+. ++. .. .+..+.++.+.. ....+++.
T Consensus 33 ~~~~~~~~~~~G~~~i~l~~~~~~~~------~~~~~~~~~~~l~~~~~~~~v~v~v~---------------------- 84 (227)
T 2tps_A 33 PVTVVQKALKGGATLYQFREKGGDAL------TGEARIKFAEKAQAACREAGVPFIVN---------------------- 84 (227)
T ss_dssp HHHHHHHHHHHTCSEEEECCCSTTCC------CHHHHHHHHHHHHHHHHHHTCCEEEE----------------------
T ss_pred HHHHHHHHHHCCCCEEEEecCCCCHh------HHHHHHHHHHHHHHHHHHcCCeEEEc----------------------
Confidence 5678889999999999998643 222 22 334444443211 11112221
Q ss_pred hhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHH
Q 012949 225 NLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSK 304 (452)
Q Consensus 225 ~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~ 304 (452)
+.++.+.++|++.|++.. .+. . +. +..+..|. +...++. .+++.
T Consensus 85 ------~~~~~a~~~gad~v~l~~--~~~--------~----~~------~~~~~~g~-~~~~~s~---------~t~~e 128 (227)
T 2tps_A 85 ------DDVELALNLKADGIHIGQ--EDA--------N----AK------EVRAAIGD-MILGVSA---------HTMSE 128 (227)
T ss_dssp ------SCHHHHHHHTCSEEEECT--TSS--------C----HH------HHHHHHTT-SEEEEEE---------CSHHH
T ss_pred ------CHHHHHHHcCCCEEEECC--Ccc--------C----HH------HHHHhcCC-cEEEEec---------CCHHH
Confidence 267788999999998732 221 0 11 12223454 2222221 23443
Q ss_pred HHHHHHHHHHCCcCEEEE---cCCcCC---CcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEee
Q 012949 305 VAYVAKELHDMGCFEISL---GDTIGV---GTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDC 378 (452)
Q Consensus 305 l~~~a~~l~~~Gad~I~L---~DT~G~---~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~ 378 (452)
++.+.+.|+|.|.+ -||..- ..|.. .++++.+++.++..++.. .-|....|...++++|++.|.+
T Consensus 129 ----~~~a~~~g~d~v~~~~v~~t~~~~~~~~~~~-~~~l~~~~~~~~~~pvia----~GGI~~~nv~~~~~~Ga~gv~v 199 (227)
T 2tps_A 129 ----VKQAEEDGADYVGLGPIYPTETKKDTRAVQG-VSLIEAVRRQGISIPIVG----IGGITIDNAAPVIQAGADGVSM 199 (227)
T ss_dssp ----HHHHHHHTCSEEEECCSSCCCSSSSCCCCCT-THHHHHHHHTTCCCCEEE----ESSCCTTTSHHHHHTTCSEEEE
T ss_pred ----HHHHHhCCCCEEEECCCcCCCCCCCCCCccC-HHHHHHHHHhCCCCCEEE----EcCCCHHHHHHHHHcCCCEEEE
Confidence 33455779999986 354321 12222 345566666555235544 2466667777888899998876
Q ss_pred c
Q 012949 379 S 379 (452)
Q Consensus 379 S 379 (452)
.
T Consensus 200 g 200 (227)
T 2tps_A 200 I 200 (227)
T ss_dssp S
T ss_pred h
Confidence 4
No 154
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=93.38 E-value=1.5 Score=42.97 Aligned_cols=188 Identities=13% Similarity=0.082 Sum_probs=107.3
Q ss_pred HHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEecchhhhhhhhhhhhhccchhhhhhhhccHHhH
Q 012949 154 IRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLWVYLQGF 233 (452)
Q Consensus 154 ~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~~~~~~i 233 (452)
+....+.|.+.||+=.-- .++.+.....+++.+++..++.+-+|++.+.. -+.|....-++| .+++
T Consensus 52 a~~A~~gGAdRIELc~~l---~~GGlTPS~g~i~~a~~~~~ipV~vMIRPRgG----dF~Ys~~E~~~M-------~~dI 117 (287)
T 3iwp_A 52 AVNAERGGADRIELCSGL---SEGGTTPSMGVLQVVKQSVQIPVFVMIRPRGG----DFLYSDREIEVM-------KADI 117 (287)
T ss_dssp HHHHHHHTCSEEEECBCG---GGTCBCCCHHHHHHHHTTCCSCEEEECCSSSS----CSCCCHHHHHHH-------HHHH
T ss_pred HHHHHHhCCCEEEECCCC---CCCCCCCCHHHHHHHHHhcCCCeEEEEecCCC----CcccCHHHHHHH-------HHHH
Confidence 455678999999996321 12333333456777776556667777755431 133443333333 4599
Q ss_pred HHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHHHHH
Q 012949 234 EAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELH 313 (452)
Q Consensus 234 e~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~ 313 (452)
+.++++|++.|.+-.-..|-.+ -+++++++++.++.. .+. +-.+| |.. .|+ .+..+.+.
T Consensus 118 ~~~~~~GAdGvVfG~L~~dg~i----------D~~~~~~Li~~a~~l--~vT--FHRAF---D~~-~d~---~~Ale~Li 176 (287)
T 3iwp_A 118 RLAKLYGADGLVFGALTEDGHI----------DKELCMSLMAICRPL--PVT--FHRAF---DMV-HDP---MAALETLL 176 (287)
T ss_dssp HHHHHTTCSEEEECCBCTTSCB----------CHHHHHHHHHHHTTS--CEE--ECGGG---GGC-SCH---HHHHHHHH
T ss_pred HHHHHcCCCEEEEeeeCCCCCc----------CHHHHHHHHHHcCCC--cEE--EECch---hcc-CCH---HHHHHHHH
Confidence 9999999999988753333110 135566777777654 343 22223 111 133 35567778
Q ss_pred HCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCC-ccEEEEeCCCcCcHHHHHHHHHH-cCCCEEeecccC
Q 012949 314 DMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPV-EKLAVHLHDTYGQSLPNILISLQ-MGISTVDCSVAG 382 (452)
Q Consensus 314 ~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~-~~l~vH~Hnd~GlA~ANaLaAl~-aGa~~VD~Sv~G 382 (452)
++|+++|--.-. ..+..+=.++++.+.+.... +.|-. .-|.-..|.-.-++ +|++.||.|...
T Consensus 177 ~lGvdrILTSG~--~~~a~~Gl~~Lk~Lv~~a~~rI~Ima----GGGV~~~Ni~~l~~~tG~~~~H~S~~~ 241 (287)
T 3iwp_A 177 TLGFERVLTSGC--DSSALEGLPLIKRLIEQAKGRIVVMP----GGGITDRNLQRILEGSGATEFHCSARS 241 (287)
T ss_dssp HHTCSEEEECTT--SSSTTTTHHHHHHHHHHHTTSSEEEE----CTTCCTTTHHHHHHHHCCSEEEECCEE
T ss_pred HcCCCEEECCCC--CCChHHhHHHHHHHHHHhCCCCEEEE----CCCcCHHHHHHHHHhhCCCEEeECcCc
Confidence 889999887332 22222223344545444332 23332 34555667766666 999999999754
No 155
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=93.37 E-value=1.9 Score=41.18 Aligned_cols=141 Identities=21% Similarity=0.211 Sum_probs=85.9
Q ss_pred hHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHHH
Q 012949 232 GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKE 311 (452)
Q Consensus 232 ~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~ 311 (452)
-.+.|.+.|+.-|-+.-. + +.. +.+..+..+++| +.+.|+|. +..+.+.-+.-++.
T Consensus 48 lc~eA~~~~~~aVcV~p~----~------------v~~---a~~~L~~s~v~v----~tVigFP~-G~~~~~~Kv~Ea~~ 103 (239)
T 3ngj_A 48 LCSEAAEYKFASVCVNPT----W------------VPL---CAELLKGTGVKV----CTVIGFPL-GATPSEVKAYETKV 103 (239)
T ss_dssp HHHHHHHHTCSEEEECGG----G------------HHH---HHHHHTTSSCEE----EEEESTTT-CCSCHHHHHHHHHH
T ss_pred HHHHHHhcCCcEEEECHH----H------------HHH---HHHHhCCCCCeE----EEEeccCC-CCCchHHHHHHHHH
Confidence 456777888887776421 1 122 222333344443 44467775 45556666667788
Q ss_pred HHHCCcCEEEEcCCcCC---CcHHHHHHHHHHHHHhCCCccEEE----EeCCCcCcHHHHHHHHHHcCCCEEeecccCCC
Q 012949 312 LHDMGCFEISLGDTIGV---GTPGTVVPMLEAVMAVVPVEKLAV----HLHDTYGQSLPNILISLQMGISTVDCSVAGLG 384 (452)
Q Consensus 312 l~~~Gad~I~L~DT~G~---~~P~~v~~li~~l~~~~p~~~l~v----H~Hnd~GlA~ANaLaAl~aGa~~VD~Sv~GlG 384 (452)
+.+.|||.|-+.=-+|. ..-+.+.+-|+.+++..++..+=+ -.=++- .=...+..|.++|||+|.+|-+ .+
T Consensus 104 Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~e-ei~~a~~ia~~aGADfVKTSTG-f~ 181 (239)
T 3ngj_A 104 AVEQGAEEVDMVINIGMVKAKKYDDVEKDVKAVVDASGKALTKVIIECCYLTNE-EKVEVCKRCVAAGAEYVKTSTG-FG 181 (239)
T ss_dssp HHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHHTTSEEEEECCGGGSCHH-HHHHHHHHHHHHTCSEEECCCS-SS
T ss_pred HHHcCCCEEEEEeehHHhccccHHHHHHHHHHHHHHhcCCceEEEEecCCCCHH-HHHHHHHHHHHHCcCEEECCCC-CC
Confidence 88899999988877776 445668888888887765322221 111111 1223344558999999999843 32
Q ss_pred CCCCCCCCCCcccHHHHHHHHH
Q 012949 385 GCPYAKGASGNVATEDVVYMLS 406 (452)
Q Consensus 385 ecP~a~graGNaalE~vv~~L~ 406 (452)
+|++..|++-.+.+
T Consensus 182 --------~ggAt~~dv~lmr~ 195 (239)
T 3ngj_A 182 --------THGATPEDVKLMKD 195 (239)
T ss_dssp --------SCCCCHHHHHHHHH
T ss_pred --------CCCCCHHHHHHHHH
Confidence 35678888777665
No 156
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=93.20 E-value=4.7 Score=37.62 Aligned_cols=166 Identities=15% Similarity=0.091 Sum_probs=88.7
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHh--CCCcEEEEEEeeecCCCCCCCCHHHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKV--LSIPVRGYVSCVVGCPVEGAIPPSKVAYV 308 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~--~G~~V~~~l~~~~g~p~~~r~d~e~l~~~ 308 (452)
+.++.|.+.|++.|.+..... .+.+.++.++++.+.++.+-+ .|+.+ .+....+.+..--.+++.+.++
T Consensus 93 ~~i~~A~~lG~~~v~~~~g~~-------~~~~~~~~~~~~~~~l~~l~~~~~gv~l--~lEn~~~~~~~~~~~~~~~~~l 163 (287)
T 2x7v_A 93 KEVEICRKLGIRYLNIHPGSH-------LGTGEEEGIDRIVRGLNEVLNNTEGVVI--LLENVSQKGGNIGYKLEQLKKI 163 (287)
T ss_dssp HHHHHHHHHTCCEEEECCEEC-------TTSCHHHHHHHHHHHHHHHHTTCCSCEE--EEECCCCCTTEECSSHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEecCCC-------CCCCHHHHHHHHHHHHHHHHcccCCCEE--EEeCCCCCCCccCCCHHHHHHH
Confidence 477888899999998754321 123566777776666654433 45443 3443211100001356777666
Q ss_pred HHHHHHCCc-C--EEEEcCCc-----CC--CcHHHHHHHHHHHHHhCC-CccEEEEeCCCcCcHHHHHHHHHHcCCCEEe
Q 012949 309 AKELHDMGC-F--EISLGDTI-----GV--GTPGTVVPMLEAVMAVVP-VEKLAVHLHDTYGQSLPNILISLQMGISTVD 377 (452)
Q Consensus 309 a~~l~~~Ga-d--~I~L~DT~-----G~--~~P~~v~~li~~l~~~~p-~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD 377 (452)
++.+ +- + .+++ ||. |. ..|..+.++++.+.+.++ +-...+|+||..+-- |-. -|
T Consensus 164 ~~~~---~~~~~vg~~~-D~~h~~~~g~~~~~~~~~~~~l~~~~~~~g~~~i~~vH~~D~~~~~----------~~~-~~ 228 (287)
T 2x7v_A 164 RDLV---DQRDRVAITY-DTCHGFDSGYDITKKEGVEALLNEIESLFGLERLKMIHLNDSKYPL----------GAA-KD 228 (287)
T ss_dssp HHHC---SCGGGEEEEE-EHHHHHHTTCCTTSHHHHHHHHHHHHHHTCGGGEEEEEECEESSCT----------TCC-CC
T ss_pred HHhc---CCCCCeEEEE-EhhhHHHcCCCCCchHHHHHHHHHHHHhcCccceeEEEEecCCCcc----------CCc-cc
Confidence 6554 32 2 2333 652 21 234567778877766654 434688999876521 100 01
Q ss_pred ecccCCCCCCCCCCCCCcccHHHHHHHHHcC---CC----CCCCChhhHHHHHHHHHHH
Q 012949 378 CSVAGLGGCPYAKGASGNVATEDVVYMLSGL---GV----ETNVDLRKLMLAGDFINKH 429 (452)
Q Consensus 378 ~Sv~GlGecP~a~graGNaalE~vv~~L~~~---Gi----~t~iDl~~L~~la~~v~~~ 429 (452)
- -..+| .|..+.+.++..|+.. |+ +..-|.+.+.+-.+++.+.
T Consensus 229 ~-~~~~G--------~G~id~~~~~~~L~~~gy~g~~~~lE~~~~~~~~~~s~~~l~~~ 278 (287)
T 2x7v_A 229 R-HERIG--------SGFIGEEGFAVFFSFKEIQEVPWILETPGGNEEHAEDIKKVFEI 278 (287)
T ss_dssp C-EECTT--------SSSSHHHHHHHHHTCHHHHTSCEEECCSSCHHHHHHHHHHHHHH
T ss_pred c-cCCCC--------CCCcCHHHHHHHHhccCCCCCcEEEecCCCCcchHHHHHHHHHH
Confidence 0 01122 4789999999999863 31 2222334555544554443
No 157
>3qm3_A Fructose-bisphosphate aldolase; structural genomics, center for structural genomics of infec diseases, csgid, TIM beta/alpha-barrel, lyase; 1.85A {Campylobacter jejuni} SCOP: c.1.10.2
Probab=93.19 E-value=0.69 Score=46.79 Aligned_cols=134 Identities=17% Similarity=0.144 Sum_probs=89.6
Q ss_pred HHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCC----------CCCCH
Q 012949 233 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVE----------GAIPP 302 (452)
Q Consensus 233 ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~----------~r~d~ 302 (452)
+..+.+.|..-|.+=.|. .+.+|.++.-++++++|+..|+.|.+.|-..-|.+|. -.++|
T Consensus 128 ~~~~~~~GFtSVMiDgS~----------lp~eENI~~Tk~vv~~ah~~gvsVEaELG~igG~Edgv~~~~~~~~~~yT~P 197 (357)
T 3qm3_A 128 KKTHGQALFSSHMLDLSE----------ESLEENLSTCEVYLQKLDALGVALEIELGCTGGEEDGVDNTGIDNSKLYTQP 197 (357)
T ss_dssp HHHHSSCSCSEEECCCTT----------SCHHHHHHHHHHHHHHHHHHTCEEEEECCCCCC-----CCSSTTCTTTSCCH
T ss_pred HhhhcCCCCCEEEEeCCC----------CCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCccccccccccccCCH
Confidence 444556688888764332 2568999999999999999999999888765444432 24799
Q ss_pred HHHHHHHHHHHHC-CcCEEEEc--CCcCC-------CcHHHHHHHHHHHHHhC--C---CccEEEEeCCCcCcHHHHHHH
Q 012949 303 SKVAYVAKELHDM-GCFEISLG--DTIGV-------GTPGTVVPMLEAVMAVV--P---VEKLAVHLHDTYGQSLPNILI 367 (452)
Q Consensus 303 e~l~~~a~~l~~~-Gad~I~L~--DT~G~-------~~P~~v~~li~~l~~~~--p---~~~l~vH~Hnd~GlA~ANaLa 367 (452)
+...+++++.-.. |+|.+.++ -.=|. +.|+...++-+.+++.+ | .+||.+|.= -|........
T Consensus 198 eea~~Fv~~tg~~~gvD~LAvaiGt~HG~Yk~g~p~L~~~~L~~i~~~i~~~~~~~~~~~vpLVlHGg--SG~p~e~i~~ 275 (357)
T 3qm3_A 198 EDVALAYERLGKISDKFSIAASFGNVHGVYKPGNVSLQPEILKNSQKFVKDKFALNSDKPINFVFHGG--SGSELKDIKN 275 (357)
T ss_dssp HHHHHHHHHHTTTCSCEEEECCSSCCCSSCCSSCCCCCTHHHHHHHHHHHHHTTCSCSCCSCEEECSC--TTCCHHHHHH
T ss_pred HHHHHHHHHhCCCCcccEEEEecCCccCCcCCCCCCCCHHHHHHHHHHHHHHhccccCCCCcEEEeCC--CCCCHHHHHH
Confidence 9999988876322 45554442 22122 24566666666666654 2 256777665 4888999999
Q ss_pred HHHcCCCEEee
Q 012949 368 SLQMGISTVDC 378 (452)
Q Consensus 368 Al~aGa~~VD~ 378 (452)
|+..|+.-|+.
T Consensus 276 ai~~GV~KiNi 286 (357)
T 3qm3_A 276 AVSYGVIKMNI 286 (357)
T ss_dssp HHHTTEEEEEE
T ss_pred HHHCCceEEEe
Confidence 99999876543
No 158
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=93.18 E-value=1.7 Score=43.44 Aligned_cols=137 Identities=13% Similarity=0.114 Sum_probs=81.8
Q ss_pred hHHHHHHcCCCEEEEEec--CChHHHhhhcCCCHHHHHHHHHHHHHHHHh-CCCcEEEEEEeeecCCCCCCCCHHHHHHH
Q 012949 232 GFEAAIAAGAKEVAIFAS--ASEAFSKSNINCSIEDSLVRYRAVAHAAKV-LSIPVRGYVSCVVGCPVEGAIPPSKVAYV 308 (452)
Q Consensus 232 ~ie~a~~~Gi~~V~i~~s--~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~-~G~~V~~~l~~~~g~p~~~r~d~e~l~~~ 308 (452)
..+.+.++|+|.|.|-.+ .+. ..+..+|.+...-.+.+.++++..++ .+++|.+-+.. |..+ ..+.+...++
T Consensus 75 aA~~a~~~G~D~IeIn~gcP~~~-~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~--g~~~--~~~~~~~~~~ 149 (350)
T 3b0p_A 75 AARIGEAFGYDEINLNLGCPSEK-AQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRL--GLEG--KETYRGLAQS 149 (350)
T ss_dssp HHHHHHHTTCSEEEEEECCCSHH-HHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEES--CBTT--CCCHHHHHHH
T ss_pred HHHHHHHcCCCEEEECCcCCCCc-CcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEec--CcCc--cccHHHHHHH
Confidence 556777889999888753 222 22333444444445556666666665 47777643332 2111 2345678889
Q ss_pred HHHHHHCCcCEEEEcCCc---CCCcHH-------HHHHHHHHHHHhCCCccEEEEeCCCcCcH-HHHHHHHHHcCCCEEe
Q 012949 309 AKELHDMGCFEISLGDTI---GVGTPG-------TVVPMLEAVMAVVPVEKLAVHLHDTYGQS-LPNILISLQMGISTVD 377 (452)
Q Consensus 309 a~~l~~~Gad~I~L~DT~---G~~~P~-------~v~~li~~l~~~~p~~~l~vH~Hnd~GlA-~ANaLaAl~aGa~~VD 377 (452)
++.+.++|++.|.+-+-. |+ ++. .-.++++.+++.+|.++|..=+ |.. ...+..+++ |||.|-
T Consensus 150 a~~l~~aG~d~I~V~~r~~~~g~-~g~~~~~~~~~~~~~i~~ik~~~~~iPVianG----gI~s~eda~~~l~-GaD~V~ 223 (350)
T 3b0p_A 150 VEAMAEAGVKVFVVHARSALLAL-STKANREIPPLRHDWVHRLKGDFPQLTFVTNG----GIRSLEEALFHLK-RVDGVM 223 (350)
T ss_dssp HHHHHHTTCCEEEEECSCBC-----------CCCCCHHHHHHHHHHCTTSEEEEES----SCCSHHHHHHHHT-TSSEEE
T ss_pred HHHHHHcCCCEEEEecCchhccc-CcccccCCCcccHHHHHHHHHhCCCCeEEEEC----CcCCHHHHHHHHh-CCCEEE
Confidence 999999999999986533 22 221 1357788899888666665543 322 344445555 988775
Q ss_pred ec
Q 012949 378 CS 379 (452)
Q Consensus 378 ~S 379 (452)
..
T Consensus 224 iG 225 (350)
T 3b0p_A 224 LG 225 (350)
T ss_dssp EC
T ss_pred EC
Confidence 44
No 159
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=93.17 E-value=7.1 Score=38.42 Aligned_cols=193 Identities=15% Similarity=0.155 Sum_probs=108.3
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHH---hccCCceeEEe----cchhhhhhhhhhhhh
Q 012949 144 TVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVR---DLEGARLPVLT----PNLKVILQRSILFQQ 216 (452)
Q Consensus 144 ~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~---~~~~~~l~~l~----~~~~~~i~r~~~~~~ 216 (452)
.++.+.-.++++.|.+.|++.|-+.--.. -.+.+. .+|-.+.++ +..+-++++++ .+.+
T Consensus 39 ~iD~~~l~~li~~li~~Gv~Gl~v~GtTG--E~~~Ls-~~Er~~v~~~~v~~~~grvpViaGvg~~st~----------- 104 (315)
T 3si9_A 39 AIDEKAFCNFVEWQITQGINGVSPVGTTG--ESPTLT-HEEHKRIIELCVEQVAKRVPVVAGAGSNSTS----------- 104 (315)
T ss_dssp CBCHHHHHHHHHHHHHTTCSEEECSSTTT--TGGGSC-HHHHHHHHHHHHHHHTTSSCBEEECCCSSHH-----------
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCcccc--CccccC-HHHHHHHHHHHHHHhCCCCcEEEeCCCCCHH-----------
Confidence 57999999999999999999987643221 123342 233333333 32222333332 1211
Q ss_pred ccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCC
Q 012949 217 CHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPV 296 (452)
Q Consensus 217 ~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~ 296 (452)
+ ..+-.+.|.++|+|-+.+..+- + ++-|.++.++-++.+.+ ..++++..|= .|.
T Consensus 105 ---~--------ai~la~~A~~~Gadavlv~~P~---y----~~~~~~~l~~~f~~va~---a~~lPiilYn-----~P~ 158 (315)
T 3si9_A 105 ---E--------AVELAKHAEKAGADAVLVVTPY---Y----NRPNQRGLYTHFSSIAK---AISIPIIIYN-----IPS 158 (315)
T ss_dssp ---H--------HHHHHHHHHHTTCSEEEEECCC---S----SCCCHHHHHHHHHHHHH---HCSSCEEEEE-----CHH
T ss_pred ---H--------HHHHHHHHHhcCCCEEEECCCC---C----CCCCHHHHHHHHHHHHH---cCCCCEEEEe-----Cch
Confidence 1 1234567888999999887652 1 22355555555544433 3478876432 232
Q ss_pred --CCCCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEE-EeCCCcCcHHHHHHHHHHcCC
Q 012949 297 --EGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAV-HLHDTYGQSLPNILISLQMGI 373 (452)
Q Consensus 297 --~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~v-H~Hnd~GlA~ANaLaAl~aGa 373 (452)
....+++.+.+++++ . ...+.++||.|- ..++.++++.. +. .+.+ -+.++ ..+.++.+|+
T Consensus 159 ~tg~~l~~~~~~~La~~---~-pnIvgiKdssgd--~~~~~~l~~~~----~~-~f~v~~G~d~------~~l~~l~~G~ 221 (315)
T 3si9_A 159 RSVIDMAVETMRDLCRD---F-KNIIGVKDATGK--IERASEQREKC----GK-DFVQLSGDDC------TALGFNAHGG 221 (315)
T ss_dssp HHSCCCCHHHHHHHHHH---C-TTEEEEEECSCC--THHHHHHHHHH----CS-SSEEEESCGG------GHHHHHHTTC
T ss_pred hhCCCCCHHHHHHHHhh---C-CCEEEEEeCCCC--HHHHHHHHHHc----CC-CeEEEecCHH------HHHHHHHcCC
Confidence 224567776666532 3 478999999875 45565555443 32 2333 44433 2467788998
Q ss_pred CEEeecccCCCCCCCCCCCCCcccHHHHHHHHH
Q 012949 374 STVDCSVAGLGGCPYAKGASGNVATEDVVYMLS 406 (452)
Q Consensus 374 ~~VD~Sv~GlGecP~a~graGNaalE~vv~~L~ 406 (452)
+ +.|.+ ++|+.-+.++...+
T Consensus 222 ~---G~is~----------~an~~P~~~~~l~~ 241 (315)
T 3si9_A 222 V---GCISV----------SSNVAPKLCAQLHA 241 (315)
T ss_dssp C---EEEES----------GGGTCHHHHHHHHH
T ss_pred C---EEEec----------HHHhhHHHHHHHHH
Confidence 6 34443 34555555555544
No 160
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=93.16 E-value=3 Score=40.61 Aligned_cols=156 Identities=16% Similarity=0.169 Sum_probs=88.3
Q ss_pred HHHHHHHHHCCCCEEEEecCC------CCCcccccCCHHHHHHHHHhccC-CceeEEecchhhhhhhhhhhhhccchhhh
Q 012949 151 VELIRRLVSSGLPVVEATSFV------SPKWVPQLADARDVMEAVRDLEG-ARLPVLTPNLKVILQRSILFQQCHASVIS 223 (452)
Q Consensus 151 ~~i~~~L~~~Gv~~IEvG~~~------s~~~~p~~~D~e~v~~~i~~~~~-~~l~~l~~~~~~~i~r~~~~~~~~~~~i~ 223 (452)
..-++.++++||+.|-+|... .|.-.| -..++++...+.+.. +..+.++-.+. +.+|...+.+.+
T Consensus 27 a~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~--vTldemi~h~~aV~r~~~~~~vvaD~p-----fgsy~~s~~~a~- 98 (275)
T 1o66_A 27 SSFAALMDDAGVEMLLVGDSLGMAVQGRKSTLP--VSLRDMCYHTECVARGAKNAMIVSDLP-----FGAYQQSKEQAF- 98 (275)
T ss_dssp HHHHHHHHHTTCCEEEECTTHHHHTTCCSSSTT--CCHHHHHHHHHHHHHHCSSSEEEEECC-----TTSSSSCHHHHH-
T ss_pred HHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCC--CCHHHHHHHHHHHHhhCCCCeEEEECC-----CCCccCCHHHHH-
Confidence 345788899999999998431 122111 245677776665432 22222222222 112222222221
Q ss_pred hhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEee------ec-CCC
Q 012949 224 SNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCV------VG-CPV 296 (452)
Q Consensus 224 ~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~------~g-~p~ 296 (452)
+...+..++|++-|.+-... + +.+.|+.+.+.|++|.+.|-.+ +| .-.
T Consensus 99 -------~na~rl~kaGa~aVklEdg~--------------e----~~~~I~al~~agIpV~gHiGLtPQs~~~~ggf~v 153 (275)
T 1o66_A 99 -------AAAAELMAAGAHMVKLEGGV--------------W----MAETTEFLQMRGIPVCAHIGLTPQSVFAFGGYKV 153 (275)
T ss_dssp -------HHHHHHHHTTCSEEEEECSG--------------G----GHHHHHHHHHTTCCEEEEEESCGGGTTC------
T ss_pred -------HHHHHHHHcCCcEEEECCcH--------------H----HHHHHHHHHHcCCCeEeeeccCceeecccCCeEE
Confidence 23446667999999998751 1 2355577778999987666532 00 001
Q ss_pred CCCC-CHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCC
Q 012949 297 EGAI-PPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPV 347 (452)
Q Consensus 297 ~~r~-d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~ 347 (452)
-+|+ ..+.+.+-++++.++||+.|.+.= .|. ++++.+.+.++.
T Consensus 154 ~grt~~a~~~i~rA~a~~eAGA~~ivlE~-----vp~---~~a~~it~~l~i 197 (275)
T 1o66_A 154 QGRGGKAQALLNDAKAHDDAGAAVVLMEC-----VLA---ELAKKVTETVSC 197 (275)
T ss_dssp -----CHHHHHHHHHHHHHTTCSEEEEES-----CCH---HHHHHHHHHCSS
T ss_pred EeChHHHHHHHHHHHHHHHcCCcEEEEec-----CCH---HHHHHHHHhCCC
Confidence 1222 246777788899999999999953 353 456666777654
No 161
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=93.08 E-value=0.74 Score=45.94 Aligned_cols=147 Identities=15% Similarity=0.161 Sum_probs=88.1
Q ss_pred HHHHHHHHHH-HCCCCEEEEecC-CCCCcccccCCHHHHHHHHHhc---cCCceeEEecchhhhhhhhhhhhhccchhhh
Q 012949 149 VKVELIRRLV-SSGLPVVEATSF-VSPKWVPQLADARDVMEAVRDL---EGARLPVLTPNLKVILQRSILFQQCHASVIS 223 (452)
Q Consensus 149 ~k~~i~~~L~-~~Gv~~IEvG~~-~s~~~~p~~~D~e~v~~~i~~~---~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~ 223 (452)
...++++.+. +.|.+.|++|.- ..|...+ ...++..+.++.+ .++.+++- +..+- +
T Consensus 81 ~~~~~A~~~v~~~GAdiIDIg~eStrP~~~~--vs~ee~~~~V~~v~~~~~vPlsID--g~~~~---------T------ 141 (323)
T 4djd_D 81 EPGRWAQKCVAEYGADLIYLKLDGADPEGAN--HSVDQCVATVKEVLQAVGVPLVVV--GCGDV---------E------ 141 (323)
T ss_dssp CHHHHHHHHHHTTCCSEEEEECGGGCTTTTC--CCHHHHHHHHHHHHHHCCSCEEEE--CCSCH---------H------
T ss_pred hHHHHHHHHHHHcCCCEEEEcCccCCCCCCC--CCHHHHHHHHHHHHhhCCceEEEE--CCCCC---------C------
Confidence 4678888888 999999999854 3343111 2345555555543 33333332 00000 0
Q ss_pred hhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHH
Q 012949 224 SNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPS 303 (452)
Q Consensus 224 ~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e 303 (452)
...+-+++|+++|.+...+..+++. +++.+++..|++.|..|. ++. + .+.+
T Consensus 142 ----~~~eV~eaAleagag~~~lINsv~~---------------~~~~~m~~laa~~g~~vV--lmh----~----~d~~ 192 (323)
T 4djd_D 142 ----KDHEVLEAVAEAAAGENLLLGNAEQ---------------ENYKSLTAACMVHKHNII--ARS----P----LDIN 192 (323)
T ss_dssp ----HHHHHHHHHHHHTTTSCCEEEEEBT---------------TBCHHHHHHHHHHTCEEE--EEC----S----SCHH
T ss_pred ----CCHHHHHHHHHhcCCCCCeEEECCc---------------ccHHHHHHHHHHhCCeEE--EEc----c----chHH
Confidence 0123678888888763323333332 112355677788898775 332 2 2468
Q ss_pred HHHHHHHHHHHCCc--CEEEEcCCcC-C-CcHHHHHHHHHHHHH
Q 012949 304 KVAYVAKELHDMGC--FEISLGDTIG-V-GTPGTVVPMLEAVMA 343 (452)
Q Consensus 304 ~l~~~a~~l~~~Ga--d~I~L~DT~G-~-~~P~~v~~li~~l~~ 343 (452)
++.++.+.+.++|+ +.|.|==.+| . -+.++..++++.++.
T Consensus 193 ~~~~l~~~a~~~GI~~e~IIlDPg~g~fgk~~e~~l~~l~~ir~ 236 (323)
T 4djd_D 193 ICKQLNILINEMNLPLDHIVIDPSIGGLGYGIEYSFSIMERIRL 236 (323)
T ss_dssp HHHHHHHHHHTTTCCGGGEEEECCCCCTTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHEEEeCCCccccCCHHHHHHHHHHHHH
Confidence 88889999999998 6787732333 1 267888889998886
No 162
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=93.06 E-value=1.2 Score=42.83 Aligned_cols=193 Identities=16% Similarity=0.161 Sum_probs=108.9
Q ss_pred HHHHHHHHCCCCEEEEecC-CC-CCccccc--CCHHHHHHHHHhcc-CCceeEEecchhhhhhhhhhhhhccchhhhhhh
Q 012949 152 ELIRRLVSSGLPVVEATSF-VS-PKWVPQL--ADARDVMEAVRDLE-GARLPVLTPNLKVILQRSILFQQCHASVISSNL 226 (452)
Q Consensus 152 ~i~~~L~~~Gv~~IEvG~~-~s-~~~~p~~--~D~e~v~~~i~~~~-~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~ 226 (452)
--++.++++||+.|=+|.. .+ ....|.. -..++++..++.+. .+.+++++.. . .+|+..+ .
T Consensus 31 ~sA~~~~~aG~dai~vg~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~~~~pviaD~-~------~Gyg~~~---~---- 96 (255)
T 2qiw_A 31 WSAGLVEEAGFSGLTIGSHPVADATGSSDGENMNFADYMAVVKKITSAVSIPVSVDV-E------SGYGLSP---A---- 96 (255)
T ss_dssp HHHHHHHHTTCSCEEECHHHHHHHTTCCTTTCSCHHHHHHHHHHHHHHCSSCEEEEC-T------TCTTCCH---H----
T ss_pred HHHHHHHHcCCCEEEEChHHHHHhCCCCCCCCcCHHHHHHHHHHHHhcCCCCEEecc-C------CCcCcHH---H----
Confidence 3467788999999999952 11 1112221 24577777777653 2334444321 1 2344322 1
Q ss_pred hccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCc--EEEEEEeeecCCCCCCC----
Q 012949 227 WVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIP--VRGYVSCVVGCPVEGAI---- 300 (452)
Q Consensus 227 ~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~--V~~~l~~~~g~p~~~r~---- 300 (452)
+.+.+..++|+.-|.|-... |...+.=.+.++..++++.+++.+++.|++ |.+-.-..+ .++.
T Consensus 97 ----~~~~~l~~aGa~gv~iEd~~---~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~~----~g~~~~~~ 165 (255)
T 2qiw_A 97 ----DLIAQILEAGAVGINVEDVV---HSEGKRVREAQEHADYIAAARQAADVAGVDVVINGRTDAVK----LGADVFED 165 (255)
T ss_dssp ----HHHHHHHHTTCCEEEECSEE---GGGTTEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHHH----HCTTTSSS
T ss_pred ----HHHHHHHHcCCcEEEECCCC---CCCCCcccCHHHHHHHHHHHHHHHHhcCCCeEEEEEechhh----ccCCcchH
Confidence 36677778999999998765 222222246788899988888887777887 432221100 0111
Q ss_pred CHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcC-cHHHHHHHHHHcCCCEEee
Q 012949 301 PPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYG-QSLPNILISLQMGISTVDC 378 (452)
Q Consensus 301 d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~G-lA~ANaLaAl~aGa~~VD~ 378 (452)
..+.+.+=++.+.++|||.|.+. |+-+++.+.++ .+.++. |+-+-.... + .-.-..-.--++|+++|-.
T Consensus 166 ~~~~ai~ra~a~~eAGAd~i~~e---~~~~~~~~~~i----~~~~~~-P~n~~~~~~-~~~p~~~~~eL~~lGv~~v~~ 235 (255)
T 2qiw_A 166 PMVEAIKRIKLMEQAGARSVYPV---GLSTAEQVERL----VDAVSV-PVNITAHPV-DGHGAGDLATLAGLGVRRVTF 235 (255)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEC---CCCSHHHHHHH----HTTCSS-CBEEECBTT-TBBTTBCHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHHHHHHcCCcEEEEc---CCCCHHHHHHH----HHhCCC-CEEEEecCC-CCCCCCCHHHHHHcCCCEEEE
Confidence 14677777888899999999994 33334544444 444542 444433221 2 0011122444678887754
No 163
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=93.06 E-value=1.1 Score=45.29 Aligned_cols=143 Identities=17% Similarity=0.076 Sum_probs=87.2
Q ss_pred hHHHHHHcCCCEEEEEecC--------ChHHH--hhhcCCCHHHHHHHHHHHHHHHHhC-CC-cEEEEEEeeecCCC--C
Q 012949 232 GFEAAIAAGAKEVAIFASA--------SEAFS--KSNINCSIEDSLVRYRAVAHAAKVL-SI-PVRGYVSCVVGCPV--E 297 (452)
Q Consensus 232 ~ie~a~~~Gi~~V~i~~s~--------Sd~~~--~~~~~~s~e~~l~~~~~~v~~Ak~~-G~-~V~~~l~~~~g~p~--~ 297 (452)
..++|+++|.|.|.|-.+- |+..+ ....|-|.++-.+.+.++++.+|+. |- .|.+-|+..-.... .
T Consensus 166 aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~~~~~~~~~~ 245 (364)
T 1vyr_A 166 AVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTFQNVDN 245 (364)
T ss_dssp HHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCBTTBCC
T ss_pred HHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEEccccccccccC
Confidence 4456688999999986532 22211 2235667887778888888888874 42 45544443100000 1
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcC-CCEE
Q 012949 298 GAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMG-ISTV 376 (452)
Q Consensus 298 ~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aG-a~~V 376 (452)
+..+.+...++++.+.++|++.|.+....-...|..-.++++.+++.++. +|..=. .. -...+..+++.| ||.|
T Consensus 246 ~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~v~~~~~i-Pvi~~G--gi--t~~~a~~~l~~g~aD~V 320 (364)
T 1vyr_A 246 GPNEEADALYLIEELAKRGIAYLHMSETDLAGGKPYSEAFRQKVRERFHG-VIIGAG--AY--TAEKAEDLIGKGLIDAV 320 (364)
T ss_dssp CTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHCCS-EEEEES--SC--CHHHHHHHHHTTSCSEE
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEecCcccCCCcccHHHHHHHHHHCCC-CEEEEC--Cc--CHHHHHHHHHCCCccEE
Confidence 23466778899999999999999986521000011113567888888764 443322 12 367888999998 8876
Q ss_pred eec
Q 012949 377 DCS 379 (452)
Q Consensus 377 D~S 379 (452)
-..
T Consensus 321 ~~g 323 (364)
T 1vyr_A 321 AFG 323 (364)
T ss_dssp EES
T ss_pred EEC
Confidence 543
No 164
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=93.05 E-value=1.1 Score=41.68 Aligned_cols=226 Identities=13% Similarity=0.101 Sum_probs=116.6
Q ss_pred ccEEEeCCccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecCCCC------CcccccCCH---HHHHHHHHhccCCc
Q 012949 126 FVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSP------KWVPQLADA---RDVMEAVRDLEGAR 196 (452)
Q Consensus 126 ~V~I~D~TLRDG~Q~~~~~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~------~~~p~~~D~---e~v~~~i~~~~~~~ 196 (452)
++-+.--|+|+ ++ -.+.++.+.++|++.||+...... ...+...+. +++.+.+++ .+++
T Consensus 11 klg~~~~~~~~--------~~---~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gl~ 78 (262)
T 3p6l_A 11 RLGMQSYSFHL--------FP---LTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAAS-KGIK 78 (262)
T ss_dssp EEEEEGGGGTT--------SC---HHHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHH-TTCE
T ss_pred EEEEEecccCC--------CC---HHHHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHH-cCCe
Confidence 45555566654 23 355677788999999999753210 000111222 333333332 4666
Q ss_pred eeEEecchhhhhhhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHH
Q 012949 197 LPVLTPNLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHA 276 (452)
Q Consensus 197 l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~ 276 (452)
+.++.+.... ..+. ..+.++.|.+.|++.|.+.... +.+.++.++
T Consensus 79 i~~~~~~~~~-----------~~~~-------~~~~i~~A~~lGa~~v~~~~~~-----------------~~~~~l~~~ 123 (262)
T 3p6l_A 79 IVGTGVYVAE-----------KSSD-------WEKMFKFAKAMDLEFITCEPAL-----------------SDWDLVEKL 123 (262)
T ss_dssp EEEEEEECCS-----------STTH-------HHHHHHHHHHTTCSEEEECCCG-----------------GGHHHHHHH
T ss_pred EEEEeccCCc-----------cHHH-------HHHHHHHHHHcCCCEEEecCCH-----------------HHHHHHHHH
Confidence 6665543210 0011 1247888999999999986421 123466788
Q ss_pred HHhCCCcEEEEEEeeecCCCCCC-CCHHHHHHHHHHHHHCCcC--EEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEE
Q 012949 277 AKVLSIPVRGYVSCVVGCPVEGA-IPPSKVAYVAKELHDMGCF--EISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVH 353 (452)
Q Consensus 277 Ak~~G~~V~~~l~~~~g~p~~~r-~d~e~l~~~a~~l~~~Gad--~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH 353 (452)
|++.|+.+. +... +.... .+++.+.++++. +.+ .+++ ||.=...-. .+....+++ +++--..+|
T Consensus 124 a~~~gv~l~--~En~---~~~~~~~~~~~~~~ll~~----~~~~~g~~~-D~~h~~~~g--~d~~~~l~~-~~~~i~~vH 190 (262)
T 3p6l_A 124 SKQYNIKIS--VHNH---PQPSDYWKPENLLKAISG----RSQSLGSCS-DVGHWRREG--LNQIDCLKQ-LKGRIISLH 190 (262)
T ss_dssp HHHHTCEEE--EECC---SSSSSSSSHHHHHHHHTT----SCTTEEEEE-EHHHHHHTT--CCHHHHHHH-TTTCEEEEE
T ss_pred HHHhCCEEE--EEeC---CCccccCCHHHHHHHHHh----CCCceEEEe-chHHHHhcC--CCHHHHHHH-HhhhheEEe
Confidence 999998754 4332 11111 256666666652 222 3333 653221110 112333333 333346889
Q ss_pred eCCCcCcHHHHHHHHHHcCCCEEeecccCCCCCCCCCCCCCcccHHHHHHHHHcCCCCC----CC------ChhhHHHHH
Q 012949 354 LHDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVET----NV------DLRKLMLAG 423 (452)
Q Consensus 354 ~Hnd~GlA~ANaLaAl~aGa~~VD~Sv~GlGecP~a~graGNaalE~vv~~L~~~Gi~t----~i------Dl~~L~~la 423 (452)
++|..--. .|....+ -..+ +.|..+...++..|+..|++- .+ ..+.+....
T Consensus 191 ~~D~~~~~---------~~~~~~~--~~~~--------G~G~id~~~~~~~l~~~gy~g~~~~E~~~~~~~~~~~~~~s~ 251 (262)
T 3p6l_A 191 FKDIAPKK---------AGENEQH--DVIW--------GTGILDVKGMLKELKSQNFKGVFSIEYEYNWENSVPDIKECI 251 (262)
T ss_dssp ECEECCCC---------TTCSCCC--EECT--------TSSSSCHHHHHHHHHHTTCCEEEEECCCSSTTSCHHHHHHHH
T ss_pred eccCCccc---------cCcCccc--cCCC--------CCCccCHHHHHHHHHHCCCCeEEEEEeccCcCChHHHHHHHH
Confidence 99975110 0111100 1122 258899999999999866541 12 234555555
Q ss_pred HHHHHHh
Q 012949 424 DFINKHL 430 (452)
Q Consensus 424 ~~v~~~~ 430 (452)
+++.+.+
T Consensus 252 ~~l~~~l 258 (262)
T 3p6l_A 252 QYFNKTA 258 (262)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5655543
No 165
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=93.02 E-value=0.34 Score=49.06 Aligned_cols=72 Identities=11% Similarity=0.110 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEE-EeCCCcCcHHHHHHHHHHcCCCEEeeccc
Q 012949 303 SKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAV-HLHDTYGQSLPNILISLQMGISTVDCSVA 381 (452)
Q Consensus 303 e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~v-H~Hnd~GlA~ANaLaAl~aGa~~VD~Sv~ 381 (452)
+...+.++.+.++|+|.|.+ |+.- ..+..+.+.|+.+++.+|+++|.. -. .....+..++++|||.|.+++.
T Consensus 99 ~~~~e~~~~a~~aGvdvI~i-d~a~-G~~~~~~e~I~~ir~~~~~~~Vi~G~V-----~T~e~A~~a~~aGaD~I~Vg~g 171 (361)
T 3r2g_A 99 ENELQRAEALRDAGADFFCV-DVAH-AHAKYVGKTLKSLRQLLGSRCIMAGNV-----ATYAGADYLASCGADIIKAGIG 171 (361)
T ss_dssp HHHHHHHHHHHHTTCCEEEE-ECSC-CSSHHHHHHHHHHHHHHTTCEEEEEEE-----CSHHHHHHHHHTTCSEEEECCS
T ss_pred HHHHHHHHHHHHcCCCEEEE-eCCC-CCcHhHHHHHHHHHHhcCCCeEEEcCc-----CCHHHHHHHHHcCCCEEEEcCC
Confidence 56677899999999998877 5432 246677889999999887766655 12 3456788999999999998644
No 166
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=93.01 E-value=2.1 Score=41.68 Aligned_cols=170 Identities=11% Similarity=0.136 Sum_probs=92.7
Q ss_pred cEEEeCCccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecCC-CCCcccccCCHHHHHHHHH----hccCCceeEEe
Q 012949 127 VKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFV-SPKWVPQLADARDVMEAVR----DLEGARLPVLT 201 (452)
Q Consensus 127 V~I~D~TLRDG~Q~~~~~~~~~~k~~i~~~L~~~Gv~~IEvG~~~-s~~~~p~~~D~e~v~~~i~----~~~~~~l~~l~ 201 (452)
.-|+.+|+ |-..--+..++.+..++-++.|.+.|.+.|++|--+ .|...| + +.++.++++. .+....+..-+
T Consensus 10 MGIlNvTP-DSFsDGG~~~~~~~a~~~a~~m~~~GAdiIDIGgeSTRPga~~-v-s~eeE~~Rv~pvi~~l~~~~v~iSI 86 (270)
T 4hb7_A 10 MGILNVTP-DSFSDGGKFNNVETAINRVKAMIDEGADIIDVGGVSTRPGHEM-V-TLEEELNRVLPVVEAIVGFDVKISV 86 (270)
T ss_dssp EEEEECC-----------CHHHHHHHHHHHHHHTTCSEEEEESCCCSTTCCC-C-CHHHHHHHHHHHHHHHTTSSSEEEE
T ss_pred EEEEeCCC-CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCC-C-chHHHHHHHHHHHHHhhcCCCeEEE
Confidence 44666665 333322335788889999999999999999999643 333211 2 3444444442 23222222112
Q ss_pred cchhhhhhhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEe-cCChHHHhhhcCCCHHHHHHHHHHHHHHHHhC
Q 012949 202 PNLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFA-SASEAFSKSNINCSIEDSLVRYRAVAHAAKVL 280 (452)
Q Consensus 202 ~~~~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~-s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~ 280 (452)
...+ .+-.++|+++|++.|.=.. ...| .++.+.+.+.
T Consensus 87 DT~~------------------------~~Va~~al~aGa~iINDVs~g~~d------------------~~m~~~va~~ 124 (270)
T 4hb7_A 87 DTFR------------------------SEVAEACLKLGVDMINDQWAGLYD------------------HRMFQIVAKY 124 (270)
T ss_dssp ECSC------------------------HHHHHHHHHHTCCEEEETTTTSSC------------------THHHHHHHHT
T ss_pred ECCC------------------------HHHHHHHHHhccceeccccccccc------------------hhHHHHHHHc
Confidence 2111 2356789999999887321 1112 1334566777
Q ss_pred CCcEEEEEEeeecCCCCCCCC---HHHHHHHHHHHHHCCcC--EEEEcCCcCCC-cHHHHHHHHHHHHH
Q 012949 281 SIPVRGYVSCVVGCPVEGAIP---PSKVAYVAKELHDMGCF--EISLGDTIGVG-TPGTVVPMLEAVMA 343 (452)
Q Consensus 281 G~~V~~~l~~~~g~p~~~r~d---~e~l~~~a~~l~~~Gad--~I~L~DT~G~~-~P~~v~~li~~l~~ 343 (452)
+..+. +|+.-+.|.....- .+++.+-++.+.++|++ .|.|==-.|.+ ++++-.++++.+..
T Consensus 125 ~~~~v--lMH~~~~p~~~~vv~ev~~~l~~~i~~a~~aGI~~~~IilDPGiGFgKt~~~N~~ll~~l~~ 191 (270)
T 4hb7_A 125 DAEII--LMHNGNGNRDEPVVEEMLTSLLAQAHQAKIAGIPSNKIWLDPGIGFAKTRNEEAEVMARLDE 191 (270)
T ss_dssp TCEEE--EECCCSSCCSSCHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHTCHHH
T ss_pred CCCeE--EeccccCCccccchhHHHHHHHHHHHHHHHcCCCCceEEEeCCCCcccccccHHHHHhhHHH
Confidence 87764 77654443221110 13455556778889984 67773345544 56777778777654
No 167
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=92.87 E-value=2 Score=41.51 Aligned_cols=183 Identities=15% Similarity=0.117 Sum_probs=104.3
Q ss_pred HHHHHHCCCCEEEEecCCCC-CcccccCCHHHHHHHHHhccCCceeEEecchhhhhhhhhhhhhccchhhhhhhhccHHh
Q 012949 154 IRRLVSSGLPVVEATSFVSP-KWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLWVYLQG 232 (452)
Q Consensus 154 ~~~L~~~Gv~~IEvG~~~s~-~~~p~~~D~e~v~~~i~~~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~~~~~~ 232 (452)
+....+.|-++||+=..-.. ..-|. ..+++.+++..++.+-+|++.+.. -+.|....-++| .+|
T Consensus 14 a~~A~~~GAdRIELc~~L~~GGlTPS----~g~i~~~~~~~~ipv~vMIRPR~G----dF~Ys~~E~~~M-------~~D 78 (256)
T 1twd_A 14 ALTAQQNGADRVELCAAPKEGGLTPS----LGVLKSVRQRVTIPVHPIIRPRGG----DFCYSDGEFAAI-------LED 78 (256)
T ss_dssp HHHHHHTTCSEEEECBCGGGTCBCCC----HHHHHHHHHHCCSCEEEBCCSSSS----CSCCCHHHHHHH-------HHH
T ss_pred HHHHHHcCCCEEEEcCCcccCCCCCC----HHHHHHHHHHcCCceEEEECCCCC----CCcCCHHHHHHH-------HHH
Confidence 45667899999999642110 11132 234555555456677777755431 133444333333 469
Q ss_pred HHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHHHH
Q 012949 233 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKEL 312 (452)
Q Consensus 233 ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~l 312 (452)
++.+.++|++.|.+-+-..|-.+. .+.++++++.|+ |+++. +=.+| |.. .|+ .+..+.+
T Consensus 79 i~~~~~~GadGvV~G~Lt~dg~iD----------~~~~~~Li~~a~--~~~vT--FHRAf---D~~-~d~---~~ale~L 137 (256)
T 1twd_A 79 VRTVRELGFPGLVTGVLDVDGNVD----------MPRMEKIMAAAG--PLAVT--FHRAF---DMC-ANP---LYTLNNL 137 (256)
T ss_dssp HHHHHHTTCSEEEECCBCTTSSBC----------HHHHHHHHHHHT--TSEEE--ECGGG---GGC-SCH---HHHHHHH
T ss_pred HHHHHHcCCCEEEEeeECCCCCcC----------HHHHHHHHHHhC--CCcEE--EECch---hcc-CCH---HHHHHHH
Confidence 999999999998887644442111 355566777765 55554 33334 221 233 3457778
Q ss_pred HHCCcCEEEEcCCcCCC-cHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEeec
Q 012949 313 HDMGCFEISLGDTIGVG-TPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCS 379 (452)
Q Consensus 313 ~~~Gad~I~L~DT~G~~-~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~S 379 (452)
.++|+++|- |.|.. +..+-.++++.+.+... .|.+=.= -|.-..|.-.-++.|++.++.|
T Consensus 138 ~~lG~~rIL---TSG~~~~a~~g~~~L~~Lv~~a~--~i~Im~G--gGv~~~Ni~~l~~tGv~e~H~S 198 (256)
T 1twd_A 138 AELGIARVL---TSGQKSDALQGLSKIMELIAHRD--APIIMAG--AGVRAENLHHFLDAGVLEVHSS 198 (256)
T ss_dssp HHHTCCEEE---ECTTSSSTTTTHHHHHHHHTSSS--CCEEEEE--SSCCTTTHHHHHHHTCSEEEEC
T ss_pred HHcCCCEEE---CCCCCCCHHHHHHHHHHHHHhhC--CcEEEec--CCcCHHHHHHHHHcCCCeEeEC
Confidence 888999987 66654 33444556666665443 2322111 1333344444348999999977
No 168
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=92.81 E-value=1 Score=43.66 Aligned_cols=142 Identities=22% Similarity=0.165 Sum_probs=92.5
Q ss_pred hHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHHH
Q 012949 232 GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKE 311 (452)
Q Consensus 232 ~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~ 311 (452)
-.+.|.+.|+.-|-+.- .+ +. .+.+..+..++.| +.+.|+|.. ..+.+.-+.-++.
T Consensus 64 lc~eA~~~~~aaVCV~p----~~------------V~---~a~~~L~gs~v~v----~tVigFP~G-~~~~~~Kv~Ea~~ 119 (260)
T 3r12_A 64 LCLEARENRFHGVCVNP----CY------------VK---LAREELEGTDVKV----VTVVGFPLG-ANETRTKAHEAIF 119 (260)
T ss_dssp HHHHHHHTTCSEEEECG----GG------------HH---HHHHHHTTSCCEE----EEEESTTTC-CSCHHHHHHHHHH
T ss_pred HHHHHHhcCCcEEEECH----HH------------HH---HHHHHhcCCCCeE----EEEecCCCC-CCcHHHHHHHHHH
Confidence 45677788888776642 11 12 1223333345443 445677854 4556666667778
Q ss_pred HHHCCcCEEEEcCCcCCC---cHHHHHHHHHHHHHhCCCcc----EEEEeCCCcCcHHHHHHHHHHcCCCEEeecccCCC
Q 012949 312 LHDMGCFEISLGDTIGVG---TPGTVVPMLEAVMAVVPVEK----LAVHLHDTYGQSLPNILISLQMGISTVDCSVAGLG 384 (452)
Q Consensus 312 l~~~Gad~I~L~DT~G~~---~P~~v~~li~~l~~~~p~~~----l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~Sv~GlG 384 (452)
+.+.|||.|-+.=-+|.+ .-..+.+-|+.+++..++.+ |+....++--. ...+..|.++|||+|=+| .|.+
T Consensus 120 Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~eei-~~A~~ia~eaGADfVKTS-TGf~ 197 (260)
T 3r12_A 120 AVESGADEIDMVINVGMLKAKEWEYVYEDIRSVVESVKGKVVKVIIETCYLDTEEK-IAACVISKLAGAHFVKTS-TGFG 197 (260)
T ss_dssp HHHHTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHH-HHHHHHHHHTTCSEEECC-CSSS
T ss_pred HHHcCCCEEEEEeehhhhccccHHHHHHHHHHHHHhcCCCcEEEEEeCCCCCHHHH-HHHHHHHHHhCcCEEEcC-CCCC
Confidence 888999999988777774 55778888888888765422 33334444333 344677889999999999 5654
Q ss_pred CCCCCCCCCCcccHHHHHHHHHc
Q 012949 385 GCPYAKGASGNVATEDVVYMLSG 407 (452)
Q Consensus 385 ecP~a~graGNaalE~vv~~L~~ 407 (452)
+|++.+|++-.+.+.
T Consensus 198 --------~~GAT~edV~lm~~~ 212 (260)
T 3r12_A 198 --------TGGATAEDVHLMKWI 212 (260)
T ss_dssp --------SCCCCHHHHHHHHHH
T ss_pred --------CCCCCHHHHHHHHHH
Confidence 357888888777764
No 169
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=92.79 E-value=4.4 Score=40.45 Aligned_cols=135 Identities=10% Similarity=0.030 Sum_probs=83.6
Q ss_pred hHHHHHHcCCCEEEEEe--cCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCC-------H
Q 012949 232 GFEAAIAAGAKEVAIFA--SASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIP-------P 302 (452)
Q Consensus 232 ~ie~a~~~Gi~~V~i~~--s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d-------~ 302 (452)
.++.|++.|+|-|-+.+ ...+-. + ..++.++.+.++.+.|++.|+++...+.. ++.......+ |
T Consensus 115 sve~a~~~GADAVk~lv~~g~d~~~-e-----~~~~q~~~l~rv~~ec~~~GiPlllEil~-y~~~~~~~~~~~~a~~~p 187 (332)
T 3iv3_A 115 SIKRLKEAGADAVKFLLYYDVDGDP-Q-----VNVQKQAYIERIGSECQAEDIPFFLEILT-YDETISNNSSVEFAKVKV 187 (332)
T ss_dssp CHHHHHHTTCSEEEEEEEECTTSCH-H-----HHHHHHHHHHHHHHHHHHHTCCEEEEEEE-CBTTBSCTTSHHHHTTHH
T ss_pred CHHHHHHcCCCEEEEEEEcCCCchH-H-----HHHHHHHHHHHHHHHHHHcCCceEEEEec-cCCCCCCCcchhhhccCH
Confidence 68899999999766554 322210 0 01356888999999999999998754442 2211122344 4
Q ss_pred HHHHHHHHHH--HHCCcCEEEEcCCc------CC------CcHHHHHHHHHHHHHhCCCccEEE-EeCCCcCcHHHHHHH
Q 012949 303 SKVAYVAKEL--HDMGCFEISLGDTI------GV------GTPGTVVPMLEAVMAVVPVEKLAV-HLHDTYGQSLPNILI 367 (452)
Q Consensus 303 e~l~~~a~~l--~~~Gad~I~L~DT~------G~------~~P~~v~~li~~l~~~~p~~~l~v-H~Hnd~GlA~ANaLa 367 (452)
+.+...++.+ .++|+|.+-+.=|. |. -+-.+..+.++.+.+..| +|+-+ =.=-+.-.-+...-.
T Consensus 188 ~~V~~a~R~~~~~elGaDv~Kve~p~~~~~v~g~~~~~~~y~~~ea~~~f~~~~~a~~-~P~v~lsgG~~~~~fl~~v~~ 266 (332)
T 3iv3_A 188 HKVNDAMKVFSAERFGIDVLKVEVPVNMVYVEGFAEGEVVYSKEEAAQAFREQEASTD-LPYIYLSAGVSAELFQETLVF 266 (332)
T ss_dssp HHHHHHHHHHTSGGGCCSEEEECCSSCGGGBTTTCSSCCCBCHHHHHHHHHHHHHTCS-SCEEEECTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCcCCcEEEEecCCChhhhcccccccccccHHHHHHHHHHHHhcCC-CCEEEECCCCCHHHHHHHHHH
Confidence 4489999999 67899999887332 21 133455555666655544 35432 222233455566678
Q ss_pred HHHcCCC
Q 012949 368 SLQMGIS 374 (452)
Q Consensus 368 Al~aGa~ 374 (452)
|+++|+.
T Consensus 267 A~~aGa~ 273 (332)
T 3iv3_A 267 AHKAGAK 273 (332)
T ss_dssp HHHHTCC
T ss_pred HHHcCCC
Confidence 9999983
No 170
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=92.77 E-value=4.6 Score=39.52 Aligned_cols=196 Identities=16% Similarity=0.154 Sum_probs=109.8
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCC--HHHHHHHHHhccCCceeEEe----cchhhhhhhhhhhhhc
Q 012949 144 TVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLAD--ARDVMEAVRDLEGARLPVLT----PNLKVILQRSILFQQC 217 (452)
Q Consensus 144 ~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D--~e~v~~~i~~~~~~~l~~l~----~~~~~~i~r~~~~~~~ 217 (452)
.++.+.-.++++.|.+.|++.|-+.--... .+.+.+ ..++++.+.+..+-++++++ .+.+
T Consensus 31 ~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE--~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~------------ 96 (307)
T 3s5o_A 31 EVDYGKLEENLHKLGTFPFRGFVVQGSNGE--FPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQ------------ 96 (307)
T ss_dssp CBCHHHHHHHHHHHTTSCCSEEEESSGGGT--GGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHH------------
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccc--hhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHH------------
Confidence 578999999999999999998876422111 133322 22334433333333444433 1111
Q ss_pred cchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCC-
Q 012949 218 HASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPV- 296 (452)
Q Consensus 218 ~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~- 296 (452)
+ ..+-.+.|.++|+|-+.+..+- +.+ .+.|.++.++-++.+.+ ..++++..|= .|.
T Consensus 97 --~--------ai~la~~A~~~Gadavlv~~P~---y~~--~~~s~~~l~~~f~~ia~---a~~lPiilYn-----~P~~ 153 (307)
T 3s5o_A 97 --A--------TVEMTVSMAQVGADAAMVVTPC---YYR--GRMSSAALIHHYTKVAD---LSPIPVVLYS-----VPAN 153 (307)
T ss_dssp --H--------HHHHHHHHHHTTCSEEEEECCC---TTG--GGCCHHHHHHHHHHHHH---HCSSCEEEEE-----CHHH
T ss_pred --H--------HHHHHHHHHHcCCCEEEEcCCC---cCC--CCCCHHHHHHHHHHHHh---hcCCCEEEEe-----CCcc
Confidence 1 1234567788999999987652 111 12356666665555433 4578876433 232
Q ss_pred -CCCCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEE-EeCCCcCcHHHHHHHHHHcCCC
Q 012949 297 -EGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAV-HLHDTYGQSLPNILISLQMGIS 374 (452)
Q Consensus 297 -~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~v-H~Hnd~GlA~ANaLaAl~aGa~ 374 (452)
....+++.+.+++ +. ...+.++|+.|- ..++.++++. .+...+.+ -.+|+ ..+.++.+|++
T Consensus 154 tg~~l~~~~~~~La----~~-pnIvgiKdssgd--~~~~~~~~~~----~~~~~f~v~~G~d~------~~l~~l~~G~~ 216 (307)
T 3s5o_A 154 TGLDLPVDAVVTLS----QH-PNIVGMXDSGGD--VTRIGLIVHK----TRKQDFQVLAGSAG------FLMASYALGAV 216 (307)
T ss_dssp HSCCCCHHHHHHHH----TS-TTEEEEEECSCC--HHHHHHHHHH----TTTSSCEEEESSGG------GHHHHHHHTCC
T ss_pred cCCCCCHHHHHHHh----cC-CCEEEEEcCCCC--HHHHHHHHHh----ccCCCeEEEeCcHH------HHHHHHHcCCC
Confidence 1235677776665 33 579999999874 4555555442 32113444 44443 35678889985
Q ss_pred EEeecccCCCCCCCCCCCCCcccHHHHHHHHH
Q 012949 375 TVDCSVAGLGGCPYAKGASGNVATEDVVYMLS 406 (452)
Q Consensus 375 ~VD~Sv~GlGecP~a~graGNaalE~vv~~L~ 406 (452)
+.|.| ++|+.-+.++.+.+
T Consensus 217 ---G~is~----------~an~~P~~~~~l~~ 235 (307)
T 3s5o_A 217 ---GGVCA----------LANVLGAQVCQLER 235 (307)
T ss_dssp ---EEECG----------GGGTCHHHHHHHHH
T ss_pred ---EEEec----------hhhhhHHHHHHHHH
Confidence 44553 44566566555544
No 171
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=92.75 E-value=1.7 Score=40.34 Aligned_cols=169 Identities=8% Similarity=0.025 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEecchhhhhhhhhhhhhccchhhhhhhhc
Q 012949 149 VKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLWV 228 (452)
Q Consensus 149 ~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~~ 228 (452)
+..++++.+.+.|++.|++.. | +.++.+++..+..+..+.... |...+. .+. .
T Consensus 37 ~~~~~a~~~~~~G~~~i~~~~-------~------~~i~~i~~~~~~p~i~~~~~~---------~~~~~~-~i~----~ 89 (234)
T 1yxy_A 37 IMPLMAKAAQEAGAVGIRANS-------V------RDIKEIQAITDLPIIGIIKKD---------YPPQEP-FIT----A 89 (234)
T ss_dssp SHHHHHHHHHHHTCSEEEEES-------H------HHHHHHHTTCCSCEEEECBCC---------CTTSCC-CBS----C
T ss_pred hHHHHHHHHHHCCCcEeecCC-------H------HHHHHHHHhCCCCEEeeEcCC---------CCcccc-ccC----C
Confidence 678999999999999999852 1 346667665554432221110 000000 000 0
Q ss_pred cHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhC--CCcEEEEEEeeecCCCCCCCCHHHHH
Q 012949 229 YLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVL--SIPVRGYVSCVVGCPVEGAIPPSKVA 306 (452)
Q Consensus 229 ~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~--G~~V~~~l~~~~g~p~~~r~d~e~l~ 306 (452)
..+.++.++++|++.|.+-...... .-+. .+.+.++.+|+. +..+.+ . ..+++.
T Consensus 90 ~~~~i~~~~~~Gad~V~l~~~~~~~----~~~~-------~~~~~i~~i~~~~~~~~v~~--~---------~~t~~e-- 145 (234)
T 1yxy_A 90 TMTEVDQLAALNIAVIAMDCTKRDR----HDGL-------DIASFIRQVKEKYPNQLLMA--D---------ISTFDE-- 145 (234)
T ss_dssp SHHHHHHHHTTTCSEEEEECCSSCC----TTCC-------CHHHHHHHHHHHCTTCEEEE--E---------CSSHHH--
T ss_pred hHHHHHHHHHcCCCEEEEcccccCC----CCCc-------cHHHHHHHHHHhCCCCeEEE--e---------CCCHHH--
Confidence 2347889999999998776543210 0001 123556666665 555431 1 112333
Q ss_pred HHHHHHHHCCcCEEE--EcCCc-CC--CcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcH-HHHHHHHHHcCCCEEe
Q 012949 307 YVAKELHDMGCFEIS--LGDTI-GV--GTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQS-LPNILISLQMGISTVD 377 (452)
Q Consensus 307 ~~a~~l~~~Gad~I~--L~DT~-G~--~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA-~ANaLaAl~aGa~~VD 377 (452)
++.+.++|+|.|. +.... |. ..+.. .++++.+++. .+++.. +-|.. ..|+...+++||+.|=
T Consensus 146 --a~~a~~~Gad~i~~~v~g~~~~~~~~~~~~-~~~i~~~~~~--~ipvia----~GGI~s~~~~~~~~~~Gad~v~ 213 (234)
T 1yxy_A 146 --GLVAHQAGIDFVGTTLSGYTPYSRQEAGPD-VALIEALCKA--GIAVIA----EGKIHSPEEAKKINDLGVAGIV 213 (234)
T ss_dssp --HHHHHHTTCSEEECTTTTSSTTSCCSSSCC-HHHHHHHHHT--TCCEEE----ESCCCSHHHHHHHHTTCCSEEE
T ss_pred --HHHHHHcCCCEEeeeccccCCCCcCCCCCC-HHHHHHHHhC--CCCEEE----ECCCCCHHHHHHHHHCCCCEEE
Confidence 6677889999982 22110 11 11111 2456666654 334444 33666 7788888889988653
No 172
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=92.69 E-value=3 Score=39.53 Aligned_cols=95 Identities=16% Similarity=0.083 Sum_probs=61.3
Q ss_pred HHHHHHHhCCCc-EEEEEEeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCC-------------------cCCCcH
Q 012949 272 AVAHAAKVLSIP-VRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDT-------------------IGVGTP 331 (452)
Q Consensus 272 ~~v~~Ak~~G~~-V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~DT-------------------~G~~~P 331 (452)
+.++.+|+.|-+ +..|+.. +..+.+...+.++.+.+.|+|.|.|... .+.+++
T Consensus 7 ~~~~~~~~~~~~~~~~~i~~-------g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~ 79 (262)
T 1rd5_A 7 DTMAALMAKGKTAFIPYITA-------GDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTM 79 (262)
T ss_dssp HHHHHHHHTTCCEEEEEEET-------TSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCH
T ss_pred HHHHHHHhcCCceEEEEeeC-------CCCCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCH
Confidence 444555665554 4455542 2234588899999999999999988542 233578
Q ss_pred HHHHHHHHHHHHhCCCccEEEEeCCC----cCcHHHHHHHHHHcCCCEEeec
Q 012949 332 GTVVPMLEAVMAVVPVEKLAVHLHDT----YGQSLPNILISLQMGISTVDCS 379 (452)
Q Consensus 332 ~~v~~li~~l~~~~p~~~l~vH~Hnd----~GlA~ANaLaAl~aGa~~VD~S 379 (452)
....++++.+++.. .+||.+=...+ +++. .+.++||+.|...
T Consensus 80 ~~~~~~i~~ir~~~-~~Pv~~m~~~~~~~~~~~~-----~a~~aGadgv~v~ 125 (262)
T 1rd5_A 80 DAVLEMLREVTPEL-SCPVVLLSYYKPIMFRSLA-----KMKEAGVHGLIVP 125 (262)
T ss_dssp HHHHHHHHHHGGGC-SSCEEEECCSHHHHSCCTH-----HHHHTTCCEEECT
T ss_pred HHHHHHHHHHHhcC-CCCEEEEecCcHHHHHHHH-----HHHHcCCCEEEEc
Confidence 88999999999874 34543311111 1221 2889999988763
No 173
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=92.69 E-value=2.5 Score=45.22 Aligned_cols=169 Identities=12% Similarity=0.080 Sum_probs=97.1
Q ss_pred hHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHh-CCCcEEEEEEeeecCC---CCC---CCCHHH
Q 012949 232 GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKV-LSIPVRGYVSCVVGCP---VEG---AIPPSK 304 (452)
Q Consensus 232 ~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~-~G~~V~~~l~~~~g~p---~~~---r~d~e~ 304 (452)
.+..+...|++.|.+-++..+- .+..+++..++ ....+.+|=- -|.| +.. ..+|+.
T Consensus 191 ~~~~l~~~~~~avG~NC~~gp~---------------~~~~~l~~l~~~~~~p~~vyPN--aG~p~~~~~~~~~~~~p~~ 253 (566)
T 1q7z_A 191 FAITFDELDIDALGINCSLGPE---------------EILPIFQELSQYTDKFLVVEPN--AGKPIVENGKTVYPLKPHD 253 (566)
T ss_dssp HHHHHHTSSCSEEEEESSSCHH---------------HHHHHHHHHHHTCCSEEEEECC--SSSCEEETTEEECCCCHHH
T ss_pred HHHHhhccCCCEEEEeCCCCHH---------------HHHHHHHHHHhcCCCEEEEEcC--CCCCcccCCccccCCCHHH
Confidence 4455556788888877765442 22333444433 3444432211 2333 111 236899
Q ss_pred HHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCC----cc--E----------------EE--Ee------
Q 012949 305 VAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPV----EK--L----------------AV--HL------ 354 (452)
Q Consensus 305 l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~----~~--l----------------~v--H~------ 354 (452)
+.+.++.+.+.|+..|.=| -| -+|+.++.+-+.++..-|. .+ . +. ..
T Consensus 254 ~a~~~~~~~~~G~~iiGGC--CG-TtP~hI~aia~~~~~~~p~~~~~~~~~~~~s~~~~~~~~~~~iiGer~N~Tg~dsf 330 (566)
T 1q7z_A 254 FAVHIDSYYELGVNIFGGC--CG-TTPEHVKLFRKVLGNRKPLQRKKKRIFAVSSPSKLVTFDHFVVIGERINPAGRKKL 330 (566)
T ss_dssp HHTTHHHHHHTTCSEECCC--TT-CCHHHHHHHHHHHCSCCCCCCCCCCCCEEECSSCEEESSSCEEEEEEECCTTCHHH
T ss_pred HHHHHHHHHHcCCcEEccc--cC-CCHHHHHHHHHHhcCCCCCCcccCccceecCCceeeccccceEEEEEecCCCChhH
Confidence 9999999999998776433 23 3999999998888653321 01 1 11 11
Q ss_pred -----CCCcCcHHHHHHHHHHcCCCEEeecccCCCCCCCCCCCCCcccHHHHHHHHHc-CCCCCCCChhhHHHHHHHHH
Q 012949 355 -----HDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSG-LGVETNVDLRKLMLAGDFIN 427 (452)
Q Consensus 355 -----Hnd~GlA~ANaLaAl~aGa~~VD~Sv~GlGecP~a~graGNaalE~vv~~L~~-~Gi~t~iDl~~L~~la~~v~ 427 (452)
|+++.-+++-+..-++.||++||... |... ...-..++.++-.++. .++...||..+-.-+..-++
T Consensus 331 ~~~~~~~~~~~a~~~A~~~v~~GAdiIDIgp-g~~~------v~~~ee~~rvv~~i~~~~~vpisIDT~~~~v~eaal~ 402 (566)
T 1q7z_A 331 WAEMQKGNEEIVIKEAKTQVEKGAEVLDVNF-GIES------QIDVRYVEKIVQTLPYVSNVPLSLDIQNVDLTERALR 402 (566)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHTTCSEEEEEC-SSGG------GSCHHHHHHHHHHHHHHTCSCEEEECCCHHHHHHHHH
T ss_pred HHHhhcCCHHHHHHHHHHHHHCCCCEEEECC-CCCC------CCHHHHHHHHHHHHHhhCCceEEEeCCCHHHHHHHHH
Confidence 23456678888889999999999983 2222 2333445555555554 35544566654444433343
No 174
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=92.67 E-value=2.9 Score=39.01 Aligned_cols=208 Identities=14% Similarity=0.093 Sum_probs=105.2
Q ss_pred HHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEecchhhhhhhhhhhhhccchhhhhhhh
Q 012949 148 GVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLW 227 (452)
Q Consensus 148 ~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~ 227 (452)
.+-.++++.+.+.|++.|.+--..... .......+.++.+++.. .+++++-+.-
T Consensus 30 ~d~~~~a~~~~~~Gad~i~v~d~~~~~--~~~~~~~~~i~~i~~~~--~ipvi~~ggI---------------------- 83 (253)
T 1thf_D 30 GDPVELGKFYSEIGIDELVFLDITASV--EKRKTMLELVEKVAEQI--DIPFTVGGGI---------------------- 83 (253)
T ss_dssp TCHHHHHHHHHHTTCCEEEEEESSCSS--SHHHHHHHHHHHHHTTC--CSCEEEESSC----------------------
T ss_pred cCHHHHHHHHHHcCCCEEEEECCchhh--cCCcccHHHHHHHHHhC--CCCEEEeCCC----------------------
Confidence 456888999999999998875322110 00001122333343322 3333332110
Q ss_pred ccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCC-cEEEEEEeee--c---CCCCCCC-
Q 012949 228 VYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSI-PVRGYVSCVV--G---CPVEGAI- 300 (452)
Q Consensus 228 ~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~-~V~~~l~~~~--g---~p~~~r~- 300 (452)
...++++.++++|++.|.+-.. .++....+.+..+..|. .+...+..-. | ...++-.
T Consensus 84 ~~~~~~~~~~~~Gad~V~lg~~----------------~l~~p~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~g~~~ 147 (253)
T 1thf_D 84 HDFETASELILRGADKVSINTA----------------AVENPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKK 147 (253)
T ss_dssp CSHHHHHHHHHTTCSEEEESHH----------------HHHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTE
T ss_pred CCHHHHHHHHHcCCCEEEEChH----------------HHhChHHHHHHHHHcCCCcEEEEEEEEccCCcEEEEECCCcc
Confidence 0234788999999999876532 11111112223333342 1222222100 0 0001110
Q ss_pred -CHHHHHHHHHHHHHCCcCEEEEcCC--cCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcH-HHHHHHHHHcCCCEE
Q 012949 301 -PPSKVAYVAKELHDMGCFEISLGDT--IGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQS-LPNILISLQMGISTV 376 (452)
Q Consensus 301 -d~e~l~~~a~~l~~~Gad~I~L~DT--~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA-~ANaLaAl~aGa~~V 376 (452)
+.....+.++.+.++|++.|.+-++ .|..... -.++++.+++..+ +|+-. .-|.. ..+...++++||+.|
T Consensus 148 ~~~~~~~e~~~~~~~~G~~~i~~~~~~~~g~~~g~-~~~~~~~l~~~~~-ipvia----~GGI~~~~d~~~~~~~Gadgv 221 (253)
T 1thf_D 148 NTGILLRDWVVEVEKRGAGEILLTSIDRDGTKSGY-DTEMIRFVRPLTT-LPIIA----SGGAGKMEHFLEAFLAGADAA 221 (253)
T ss_dssp EEEEEHHHHHHHHHHTTCSEEEEEETTTTTSCSCC-CHHHHHHHGGGCC-SCEEE----ESCCCSHHHHHHHHHTTCSEE
T ss_pred ccCCCHHHHHHHHHHCCCCEEEEEeccCCCCCCCC-CHHHHHHHHHhcC-CCEEE----ECCCCCHHHHHHHHHcCChHH
Confidence 0112456677778899998888643 2332221 1456666666553 34443 24555 378888889999865
Q ss_pred eecccCCCCCCCCCCCCCcccHHHHHHHHHcCCCCC
Q 012949 377 DCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVET 412 (452)
Q Consensus 377 D~Sv~GlGecP~a~graGNaalE~vv~~L~~~Gi~t 412 (452)
=+.=.=++ +....++++..|+..|+..
T Consensus 222 ~vGsal~~---------~~~~~~~~~~~l~~~g~~~ 248 (253)
T 1thf_D 222 LAASVFHF---------REIDVRELKEYLKKHGVNV 248 (253)
T ss_dssp EESHHHHT---------TCSCHHHHHHHHHHTTCCC
T ss_pred HHHHHHHc---------CCCCHHHHHHHHHHcCCcc
Confidence 33211111 1236888888888887743
No 175
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=92.60 E-value=5.3 Score=38.89 Aligned_cols=159 Identities=14% Similarity=0.141 Sum_probs=92.3
Q ss_pred HHHHHHHHHCCCCEEEEecCC------CCCcccccCCHHHHHHHHHhcc-CCc-eeEEecchhhhhhhhhhhhhccchhh
Q 012949 151 VELIRRLVSSGLPVVEATSFV------SPKWVPQLADARDVMEAVRDLE-GAR-LPVLTPNLKVILQRSILFQQCHASVI 222 (452)
Q Consensus 151 ~~i~~~L~~~Gv~~IEvG~~~------s~~~~p~~~D~e~v~~~i~~~~-~~~-l~~l~~~~~~~i~r~~~~~~~~~~~i 222 (452)
..-++.++++||+.|-+|... .|.-.| -..++++...+.+. .++ ..+++ .+. +.+| ..+.+++
T Consensus 39 a~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~--vtldem~~h~~aV~r~~~~~~vva-D~p-----fgsY-~s~~~a~ 109 (275)
T 3vav_A 39 ASFAALLDRANVDVQLIGDSLGNVLQGQTTTLP--VTLDDIAYHTACVARAQPRALIVA-DLP-----FGTY-GTPADAF 109 (275)
T ss_dssp HHHHHHHHHTTCSEEEECTTHHHHTTCCSSSTT--CCHHHHHHHHHHHHHTCCSSEEEE-ECC-----TTSC-SSHHHHH
T ss_pred HHHHHHHHHcCCCEEEECcHHHHHHcCCCCCCc--cCHHHHHHHHHHHHhcCCCCCEEE-ecC-----CCCC-CCHHHHH
Confidence 345778899999999888432 122111 24577777666553 232 23332 222 1235 3333333
Q ss_pred hhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEee------ec-CC
Q 012949 223 SSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCV------VG-CP 295 (452)
Q Consensus 223 ~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~------~g-~p 295 (452)
+ .+.+..++|++-|.+-..... .+.|+.+.+.|++|.+.+-.. +| .-
T Consensus 110 ~--------~a~rl~kaGa~aVklEdg~~~------------------~~~i~~l~~~GIpv~gHlgltPq~~~~~gg~~ 163 (275)
T 3vav_A 110 A--------SAVKLMRAGAQMVKFEGGEWL------------------AETVRFLVERAVPVCAHVGLTPQSVHAFGGFK 163 (275)
T ss_dssp H--------HHHHHHHTTCSEEEEECCGGG------------------HHHHHHHHHTTCCEEEEEESCGGGHHHHC---
T ss_pred H--------HHHHHHHcCCCEEEECCchhH------------------HHHHHHHHHCCCCEEEecCCCceEEeccCCeE
Confidence 3 455666779999999876321 345566678899998877532 11 01
Q ss_pred CCCCCC--HHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEE
Q 012949 296 VEGAIP--PSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAV 352 (452)
Q Consensus 296 ~~~r~d--~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~v 352 (452)
.-+|++ .+.+.+-++.+.++||+.|.+.= .|.. +++.+.+.++...|++
T Consensus 164 vqgrt~~~a~~~i~rA~a~~eAGA~~ivlE~-----vp~~---~a~~It~~l~iP~igI 214 (275)
T 3vav_A 164 VQGKTEAGAAQLLRDARAVEEAGAQLIVLEA-----VPTL---VAAEVTRELSIPTIGI 214 (275)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHTCSEEEEES-----CCHH---HHHHHHHHCSSCEEEE
T ss_pred EEcCCHHHHHHHHHHHHHHHHcCCCEEEecC-----CCHH---HHHHHHHhCCCCEEEE
Confidence 123432 35667777888999999999953 4554 4555566664333444
No 176
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=92.56 E-value=1.2 Score=43.10 Aligned_cols=95 Identities=18% Similarity=0.202 Sum_probs=65.0
Q ss_pred HHHHh-C-CCcEEEEEEeeecCCCCCCCCHHHHHHHHHHHHH-CCcCEEEE----------cCCcCCCcHHHHHHHHHHH
Q 012949 275 HAAKV-L-SIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHD-MGCFEISL----------GDTIGVGTPGTVVPMLEAV 341 (452)
Q Consensus 275 ~~Ak~-~-G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~-~Gad~I~L----------~DT~G~~~P~~v~~li~~l 341 (452)
+..++ . +..+.++|.. .+++.+.+.++.+.+ +|+|.|.| .|..|. .|..+.++++.+
T Consensus 90 ~~~~~~~~~~p~~v~l~~---------~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~-~~~~~~eii~~v 159 (311)
T 1ep3_A 90 PWLNENFPELPIIANVAG---------SEEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGT-DPEVAAALVKAC 159 (311)
T ss_dssp HHHHHHCTTSCEEEEECC---------SSHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGG-CHHHHHHHHHHH
T ss_pred HHHHhcCCCCcEEEEEcC---------CCHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcC-CHHHHHHHHHHH
Confidence 33444 4 6666655531 257888999999988 99997765 233443 788899999999
Q ss_pred HHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEeecc
Q 012949 342 MAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCSV 380 (452)
Q Consensus 342 ~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~Sv 380 (452)
++.+. .+|.+..--+..-...-+..+.++|++.|+++=
T Consensus 160 ~~~~~-~pv~vk~~~~~~~~~~~a~~l~~~G~d~i~v~~ 197 (311)
T 1ep3_A 160 KAVSK-VPLYVKLSPNVTDIVPIAKAVEAAGADGLTMIN 197 (311)
T ss_dssp HHHCS-SCEEEEECSCSSCSHHHHHHHHHTTCSEEEECC
T ss_pred HHhcC-CCEEEEECCChHHHHHHHHHHHHcCCCEEEEeC
Confidence 99874 467776653333233446677789999998853
No 177
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=92.50 E-value=1.7 Score=42.51 Aligned_cols=109 Identities=19% Similarity=0.180 Sum_probs=71.8
Q ss_pred EEeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCcCCC---cHH---HHHHHHHHHHHhCCCcc----EEEEeCCC
Q 012949 288 VSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVG---TPG---TVVPMLEAVMAVVPVEK----LAVHLHDT 357 (452)
Q Consensus 288 l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~---~P~---~v~~li~~l~~~~p~~~----l~vH~Hnd 357 (452)
|+.+.|+|.. ..+.+.-+.-++.+.+.||+.|-+.=-+|.+ .-. .+.+-|+.+++..+..+ |+.-.=+|
T Consensus 92 v~tVigFP~G-~~~~~~Kv~E~~~Av~~GAdEIDmVinig~lksg~~~~~~~v~~eI~~v~~a~~~~~lKVIlEt~~L~d 170 (281)
T 2a4a_A 92 IACVINFPYG-TDSMEKVLNDTEKALDDGADEIDLVINYKKIIENTDEGLKEATKLTQSVKKLLTNKILKVIIEVGELKT 170 (281)
T ss_dssp EEEEESTTTC-CSCHHHHHHHHHHHHHHTCSEEEEECCHHHHHHSHHHHHHHHHHHHHHHHTTCTTSEEEEECCHHHHCS
T ss_pred EEEEeCCCCC-CCCHHHHHHHHHHHHHcCCCEEEEecchHhhhCCChhHHHHHHHHHHHHHHHhcCCceEEEEecccCCc
Confidence 3445667754 4566666667778888999999888777744 345 67778888887665432 22222233
Q ss_pred cCcHHHHHHHHHHcCCCEEeecccCCCCCCCCCCCCCcccHHHHHHHHH
Q 012949 358 YGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLS 406 (452)
Q Consensus 358 ~GlA~ANaLaAl~aGa~~VD~Sv~GlGecP~a~graGNaalE~vv~~L~ 406 (452)
...=...+..|+++|||+|=+|- |. .+|++.+|++..+.+
T Consensus 171 ~e~i~~A~~ia~eaGADfVKTST-Gf--------~~~gAT~edv~lm~~ 210 (281)
T 2a4a_A 171 EDLIIKTTLAVLNGNADFIKTST-GK--------VQINATPSSVEYIIK 210 (281)
T ss_dssp HHHHHHHHHHHHTTTCSEEECCC-SC--------SSCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEeCC-CC--------CCCCCCHHHHHHHHH
Confidence 33223567788999999999885 22 235788888776664
No 178
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=92.50 E-value=0.97 Score=45.84 Aligned_cols=142 Identities=16% Similarity=0.037 Sum_probs=86.8
Q ss_pred hHHHHHHcCCCEEEEEecC--------ChHH--HhhhcCCCHHHHHHHHHHHHHHHHhC-CC-cEEEEEEee-ecCCCCC
Q 012949 232 GFEAAIAAGAKEVAIFASA--------SEAF--SKSNINCSIEDSLVRYRAVAHAAKVL-SI-PVRGYVSCV-VGCPVEG 298 (452)
Q Consensus 232 ~ie~a~~~Gi~~V~i~~s~--------Sd~~--~~~~~~~s~e~~l~~~~~~v~~Ak~~-G~-~V~~~l~~~-~g~p~~~ 298 (452)
..+.|.++|.|.|.|-.+- |+.. ....+|-|.++-.+.+.++++.+|+. |- .|.+-|+.. +-.....
T Consensus 171 aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vrls~~~~~~~~~~ 250 (377)
T 2r14_A 171 AAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFLELFGLTD 250 (377)
T ss_dssp HHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCCTTCCC
T ss_pred HHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEEEeccccccCCCCC
Confidence 4556678999999986532 2221 22346777887777788888888774 43 565445421 0000012
Q ss_pred CCCHHHHHHHHHHHHHCCcCEEEEcCCc-CCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcC-CCEE
Q 012949 299 AIPPSKVAYVAKELHDMGCFEISLGDTI-GVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMG-ISTV 376 (452)
Q Consensus 299 r~d~e~l~~~a~~l~~~Gad~I~L~DT~-G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aG-a~~V 376 (452)
..+.+...++++.+.++|++.|.+..-. -...|..-.++++.+++.++. +|..=. .. -...+..+++.| ||.|
T Consensus 251 ~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~ik~~~~i-Pvi~~G--gi--~~~~a~~~l~~g~aD~V 325 (377)
T 2r14_A 251 DEPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDITYPEGFREQMRQRFKG-GLIYCG--NY--DAGRAQARLDDNTADAV 325 (377)
T ss_dssp SCHHHHHHHHHHHHHHTTCSEEEEECCC------CCCTTHHHHHHHHCCS-EEEEES--SC--CHHHHHHHHHTTSCSEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCcchHHHHHHHHHHCCC-CEEEEC--CC--CHHHHHHHHHCCCceEE
Confidence 3456788899999999999999885411 000010013567788888764 444322 22 267888999998 8876
Q ss_pred ee
Q 012949 377 DC 378 (452)
Q Consensus 377 D~ 378 (452)
-.
T Consensus 326 ~i 327 (377)
T 2r14_A 326 AF 327 (377)
T ss_dssp EE
T ss_pred ee
Confidence 54
No 179
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=92.48 E-value=0.93 Score=48.54 Aligned_cols=152 Identities=15% Similarity=0.081 Sum_probs=88.2
Q ss_pred ccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhc---cCCceeEEecchhhhhhh
Q 012949 134 PRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDL---EGARLPVLTPNLKVILQR 210 (452)
Q Consensus 134 LRDG~Q~~~~~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~---~~~~l~~l~~~~~~~i~r 210 (452)
++||.+. .+.+..++.++.+.+.|-+.|++|... +.....+++.+.++.+ .++.+++=+..
T Consensus 330 f~~~~~~----~~~~~a~~~A~~~v~~GAdiIDIgpg~-----~~v~~~ee~~rvv~~i~~~~~vpisIDT~~------- 393 (566)
T 1q7z_A 330 LWAEMQK----GNEEIVIKEAKTQVEKGAEVLDVNFGI-----ESQIDVRYVEKIVQTLPYVSNVPLSLDIQN------- 393 (566)
T ss_dssp HHHHHHT----TCCHHHHHHHHHHHHTTCSEEEEECSS-----GGGSCHHHHHHHHHHHHHHTCSCEEEECCC-------
T ss_pred HHHHhhc----CCHHHHHHHHHHHHHCCCCEEEECCCC-----CCCCHHHHHHHHHHHHHhhCCceEEEeCCC-------
Confidence 6666653 366888999999999999999999322 1223344444444433 23333322221
Q ss_pred hhhhhhccchhhhhhhhccHHhHHHHHHc--CCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEE
Q 012949 211 SILFQQCHASVISSNLWVYLQGFEAAIAA--GAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYV 288 (452)
Q Consensus 211 ~~~~~~~~~~~i~~~~~~~~~~ie~a~~~--Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l 288 (452)
.+-+++|+++ |.+.|.=..... +++.++++.+++.|..+. +
T Consensus 394 -------------------~~v~eaal~~~~G~~iINdis~~~----------------~~~~~~~~~~~~~g~~vV--~ 436 (566)
T 1q7z_A 394 -------------------VDLTERALRAYPGRSLFNSAKVDE----------------EELEMKINLLKKYGGTLI--V 436 (566)
T ss_dssp -------------------HHHHHHHHHHCSSCCEEEEEESCH----------------HHHHHHHHHHHHHCCEEE--E
T ss_pred -------------------HHHHHHHHHhcCCCCEEEECCcch----------------hhHHHHHHHHHHhCCeEE--E
Confidence 2367888888 988765433211 334566778888898764 4
Q ss_pred Eeeec-CCCCCCCC--HHHHHHHHHHHHHCCc-CEEEE---cCCcCCCcHHHHHHHHHHHH
Q 012949 289 SCVVG-CPVEGAIP--PSKVAYVAKELHDMGC-FEISL---GDTIGVGTPGTVVPMLEAVM 342 (452)
Q Consensus 289 ~~~~g-~p~~~r~d--~e~l~~~a~~l~~~Ga-d~I~L---~DT~G~~~P~~v~~li~~l~ 342 (452)
+..-+ .|.. ++ .+++.+..+.+.++|+ +.|.| ..++|... +-.++++.++
T Consensus 437 m~~~~~~p~t--~~~~~~~l~~~~~~a~~~Gi~~~IilDPg~~~igfgk--~~~~~l~~~~ 493 (566)
T 1q7z_A 437 LLMGKDVPKS--FEERKEYFEKALKILERHDFSDRVIFDPGVLPLGAEG--KPVEVLKTIE 493 (566)
T ss_dssp ESCSSSCCCS--HHHHHHHHHHHHHHHHHTTCGGGEEEECCCCCTTTTC--CHHHHHHHHH
T ss_pred EeCCCCCcCC--HHHHHHHHHHHHHHHHHCCCCCcEEEeCCCCcccCcH--HHHHHHHHHH
Confidence 43211 1110 11 3566777788889999 56665 12336666 4444444443
No 180
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=92.47 E-value=1.1 Score=44.37 Aligned_cols=127 Identities=10% Similarity=0.044 Sum_probs=84.8
Q ss_pred hHHHHHHcCCCEEEEE--e-cCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEE-EEeee-cCCCCCCCCHHHHH
Q 012949 232 GFEAAIAAGAKEVAIF--A-SASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGY-VSCVV-GCPVEGAIPPSKVA 306 (452)
Q Consensus 232 ~ie~a~~~Gi~~V~i~--~-s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~-l~~~~-g~p~~~r~d~e~l~ 306 (452)
++|.|++.|.|-|.+. + .-|+. ..+.++.+.++++.|+++|+.+.+- +.+-. |.......+++.+.
T Consensus 133 sVe~AvrlGADaV~~l~~i~~Gs~~---------e~~~l~~la~vv~ea~~~GlP~~~ep~~y~r~gg~v~~~~dp~~Va 203 (307)
T 3fok_A 133 NVSSMVDRGVDFAKTLVRINLSDAG---------TAPTLEATAHAVNEAAAAQLPIMLEPFMSNWVNGKVVNDLSTDAVI 203 (307)
T ss_dssp CHHHHHHHTCCEEEEEEEECTTCTT---------HHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEETTEEEECCSHHHHH
T ss_pred CHHHHHHCCCCEEEEEEEECCCChh---------HHHHHHHHHHHHHHHHHcCCcEEEEeeccccCCCCcCCCCCHHHHH
Confidence 6888999999987743 2 12221 3478999999999999999998643 12212 22222236899999
Q ss_pred HHHHHHHHCCcC----EEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeC---CCcCcHHHHHHHHHH-cCCCEEee
Q 012949 307 YVAKELHDMGCF----EISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLH---DTYGQSLPNILISLQ-MGISTVDC 378 (452)
Q Consensus 307 ~~a~~l~~~Gad----~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~H---nd~GlA~ANaLaAl~-aGa~~VD~ 378 (452)
..++.+.++|+| .|-+.=| +. ++.+.+..| +|+-+=.= +|.--.+.....|++ +|+..+..
T Consensus 204 ~aaRiAaELGADs~~tivK~~y~------e~----f~~Vv~a~~-vPVViaGG~k~~~~~e~L~~v~~A~~~aGa~Gv~v 272 (307)
T 3fok_A 204 QSVAIAAGLGNDSSYTWMKLPVV------EE----MERVMESTT-MPTLLLGGEGGNDPDATFASWEHALTLPGVRGLTV 272 (307)
T ss_dssp HHHHHHHTCSSCCSSEEEEEECC------TT----HHHHGGGCS-SCEEEECCSCC--CHHHHHHHHHHTTSTTEEEEEE
T ss_pred HHHHHHHHhCCCcCCCEEEeCCc------HH----HHHHHHhCC-CCEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEee
Confidence 999999999999 8887433 22 355555544 34444332 244567788888999 79876654
No 181
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=92.44 E-value=8.4 Score=37.42 Aligned_cols=192 Identities=17% Similarity=0.180 Sum_probs=108.0
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHH---hccCCceeEEe----cchhhhhhhhhhhhh
Q 012949 144 TVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVR---DLEGARLPVLT----PNLKVILQRSILFQQ 216 (452)
Q Consensus 144 ~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~---~~~~~~l~~l~----~~~~~~i~r~~~~~~ 216 (452)
.++.+.-.++++.|.+.|++.|-+.--... .+.+. .+|-.+.++ +..+-++++++ .+.+
T Consensus 24 ~iD~~~l~~lv~~li~~Gv~gl~~~GttGE--~~~Ls-~~Er~~v~~~~~~~~~grvpviaGvg~~~t~----------- 89 (297)
T 3flu_A 24 SIHYEQLRDLIDWHIENGTDGIVAVGTTGE--SATLS-VEEHTAVIEAVVKHVAKRVPVIAGTGANNTV----------- 89 (297)
T ss_dssp CBCHHHHHHHHHHHHHTTCCEEEESSTTTT--GGGSC-HHHHHHHHHHHHHHHTTSSCEEEECCCSSHH-----------
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCccccC--cccCC-HHHHHHHHHHHHHHhCCCCcEEEeCCCcCHH-----------
Confidence 579999999999999999998887422211 23342 333333333 32222344333 1221
Q ss_pred ccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCC
Q 012949 217 CHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPV 296 (452)
Q Consensus 217 ~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~ 296 (452)
+ ..+-.+.|.++|+|-+.+..+- + ++-|.++.++-++.+.+ ..++++..|= .|.
T Consensus 90 ---~--------ai~la~~a~~~Gadavlv~~P~---y----~~~~~~~l~~~f~~va~---a~~lPiilYn-----~P~ 143 (297)
T 3flu_A 90 ---E--------AIALSQAAEKAGADYTLSVVPY---Y----NKPSQEGIYQHFKTIAE---ATSIPMIIYN-----VPG 143 (297)
T ss_dssp ---H--------HHHHHHHHHHTTCSEEEEECCC---S----SCCCHHHHHHHHHHHHH---HCCSCEEEEE-----CHH
T ss_pred ---H--------HHHHHHHHHHcCCCEEEECCCC---C----CCCCHHHHHHHHHHHHH---hCCCCEEEEE-----CCc
Confidence 1 1235567888999999887652 1 12355555555544443 3478876433 232
Q ss_pred --CCCCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEE-EeCCCcCcHHHHHHHHHHcCC
Q 012949 297 --EGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAV-HLHDTYGQSLPNILISLQMGI 373 (452)
Q Consensus 297 --~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~v-H~Hnd~GlA~ANaLaAl~aGa 373 (452)
....+++.+.+++ +. ...+.++||.|- ..++.++++ ..+. .+.+ -++++ ..+.++.+|+
T Consensus 144 ~tg~~l~~~~~~~La----~~-pnivgiKdssgd--~~~~~~~~~----~~~~-~f~v~~G~d~------~~l~~l~~G~ 205 (297)
T 3flu_A 144 RTVVSMTNDTILRLA----EI-PNIVGVKEASGN--IGSNIELIN----RAPE-GFVVLSGDDH------TALPFMLCGG 205 (297)
T ss_dssp HHSSCCCHHHHHHHT----TS-TTEEEEEECSCC--HHHHHHHHH----HSCT-TCEEEECCGG------GHHHHHHTTC
T ss_pred hhccCCCHHHHHHHH----cC-CCEEEEEeCCCC--HHHHHHHHH----hcCC-CeEEEECcHH------HHHHHHhCCC
Confidence 2235677666554 33 478999999874 455555543 3443 2443 44432 3567788998
Q ss_pred CEEeecccCCCCCCCCCCCCCcccHHHHHHHHH
Q 012949 374 STVDCSVAGLGGCPYAKGASGNVATEDVVYMLS 406 (452)
Q Consensus 374 ~~VD~Sv~GlGecP~a~graGNaalE~vv~~L~ 406 (452)
+ +.+.| ++|..-+.++...+
T Consensus 206 ~---G~is~----------~an~~P~~~~~l~~ 225 (297)
T 3flu_A 206 H---GVITV----------AANAAPKLFADMCR 225 (297)
T ss_dssp C---EEEES----------GGGTCHHHHHHHHH
T ss_pred C---EEEec----------hHhhhHHHHHHHHH
Confidence 6 34443 34555565555544
No 182
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=92.34 E-value=2 Score=43.41 Aligned_cols=136 Identities=20% Similarity=0.148 Sum_probs=84.5
Q ss_pred HhHHHHHHcCCCEEEEEecC--------ChHHH--hhhcCCCHHHHHHHHHHHHHHHHhC-CC-cEEEEEEeeecCCC-C
Q 012949 231 QGFEAAIAAGAKEVAIFASA--------SEAFS--KSNINCSIEDSLVRYRAVAHAAKVL-SI-PVRGYVSCVVGCPV-E 297 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~--------Sd~~~--~~~~~~s~e~~l~~~~~~v~~Ak~~-G~-~V~~~l~~~~g~p~-~ 297 (452)
+..++|.++|.|.|.|-.+- |+..+ ...+|-|.++=.+.+.++++.+|+. |- .|.+-|+..-.... .
T Consensus 165 ~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~~~~~~g~~ 244 (361)
T 3gka_A 165 RGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPRGDAHTMG 244 (361)
T ss_dssp HHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCC
T ss_pred HHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEecccccccCCCC
Confidence 35567788999999987652 33322 2235667887777777888887764 43 45544542100000 0
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcC-CCEE
Q 012949 298 GAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMG-ISTV 376 (452)
Q Consensus 298 ~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aG-a~~V 376 (452)
...+.+...++++.+.++|+|.|.+.... ..| ++++.+++.++. +|-.=. |.-...+..+++.| ||.|
T Consensus 245 ~~~~~~~~~~la~~l~~~Gvd~i~v~~~~--~~~----~~~~~ik~~~~i-Pvi~~G----git~e~a~~~l~~G~aD~V 313 (361)
T 3gka_A 245 DSDPAATFGHVARELGRRRIAFLFARESF--GGD----AIGQQLKAAFGG-PFIVNE----NFTLDSAQAALDAGQADAV 313 (361)
T ss_dssp CSCHHHHHHHHHHHHHHTTCSEEEEECCC--STT----CCHHHHHHHHCS-CEEEES----SCCHHHHHHHHHTTSCSEE
T ss_pred CCCcHHHHHHHHHHHHHcCCCEEEECCCC--CCH----HHHHHHHHHcCC-CEEEeC----CCCHHHHHHHHHcCCccEE
Confidence 11224678889999999999999886532 122 567788887764 333222 12467788899998 7766
Q ss_pred e
Q 012949 377 D 377 (452)
Q Consensus 377 D 377 (452)
-
T Consensus 314 ~ 314 (361)
T 3gka_A 314 A 314 (361)
T ss_dssp E
T ss_pred E
Confidence 4
No 183
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=92.30 E-value=1.2 Score=46.18 Aligned_cols=168 Identities=13% Similarity=0.130 Sum_probs=84.6
Q ss_pred CCccEEEeCCccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecCC-CCCcccccCCHHHHHHH----HHhcc----C
Q 012949 124 PRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFV-SPKWVPQLADARDVMEA----VRDLE----G 194 (452)
Q Consensus 124 p~~V~I~D~TLRDG~Q~~~~~~~~~~k~~i~~~L~~~Gv~~IEvG~~~-s~~~~p~~~D~e~v~~~----i~~~~----~ 194 (452)
|.-.-|+.+|+ |-..--+ ++.+..++.++.+.+.|.+.|++|.-+ .|. .+.+ +.++.+++ ++.+. .
T Consensus 191 ~~vMGIlNvTP-DSFsDgg--~~~~~al~~A~~mv~~GAdIIDIGgeSTrPG-a~~V-s~~EE~~Rv~pvI~~l~~~~~~ 265 (442)
T 3mcm_A 191 TIRMGIVNLSN-QSFSDGN--FDDNQRKLNLDELIQSGAEIIDIGAESTKPD-AKPI-SIEEEFNKLNEFLEYFKSQLAN 265 (442)
T ss_dssp SEEEEEEECSS-CC-CCCS--SCCCHHHHHHHHHHHHTCSEEEEECCCCCC-----C-CHHHHHHHHHHHHHHHHHHTTT
T ss_pred ceEEEEEeCCC-CCCCCCC--CCHHHHHHHHHHHHHCCCCEEEECCCCCCCC-CCCC-CHHHHHHHHHHHHHHHHhhccc
Confidence 44455777776 4333323 677888999999999999999999643 232 1112 33333333 23221 1
Q ss_pred --CceeEEecchhhhhhhhhhhhhccchhhhhhhhccHHhHHHHHH--cCCCE-EEEEecCChHHHhhhcCCCHHHHHHH
Q 012949 195 --ARLPVLTPNLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIA--AGAKE-VAIFASASEAFSKSNINCSIEDSLVR 269 (452)
Q Consensus 195 --~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~--~Gi~~-V~i~~s~Sd~~~~~~~~~s~e~~l~~ 269 (452)
..++.-+...+ .+-+++|++ +|++. |.=.....
T Consensus 266 ~~~~vpISIDT~~------------------------~~VaeaAL~~~aGa~i~INDVsg~~------------------ 303 (442)
T 3mcm_A 266 LIYKPLVSIDTRK------------------------LEVMQKILAKHHDIIWMINDVECNN------------------ 303 (442)
T ss_dssp CSSCCEEEEECCC------------------------HHHHHHHHHHHGGGCCEEEECCCTT------------------
T ss_pred cCCCCeEEEeCCC------------------------HHHHHHHHhhCCCCCEEEEcCCCCC------------------
Confidence 12222222111 236788888 99987 65332211
Q ss_pred HHHHHHHHHhCCCcEEEEEEeeecCCCCCCC---------CHHHHHHHHHHHHHCCc--CEEEEcCC-cCCCc-HHHHHH
Q 012949 270 YRAVAHAAKVLSIPVRGYVSCVVGCPVEGAI---------PPSKVAYVAKELHDMGC--FEISLGDT-IGVGT-PGTVVP 336 (452)
Q Consensus 270 ~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~---------d~e~l~~~a~~l~~~Ga--d~I~L~DT-~G~~~-P~~v~~ 336 (452)
..++++.+++.|..+. +|..-|.|..-.. =.+++.+.++.+.++|+ +.|.| |- +|... +++-.+
T Consensus 304 d~~m~~v~a~~g~~vV--lMh~~G~P~tmq~~~y~dvv~ev~~~l~~~i~~a~~aGI~~~~Iil-DPGiGF~Kt~~~nl~ 380 (442)
T 3mcm_A 304 IEQKAQLIAKYNKKYV--IIHNLGITDRNQYLDKENAIDNVCDYIEQKKQILLKHGIAQQNIYF-DIGFGFGKKSDTARY 380 (442)
T ss_dssp HHHHHHHHHHHTCEEE--EECC----------------CTHHHHHHHHHHHHHHHTCCGGGEEE-ECCCC----------
T ss_pred ChHHHHHHHHhCCeEE--EECCCCCCccccccCcccHHHHHHHHHHHHHHHHHHcCCCHHHEEE-eCCCCCCCCHHHHHH
Confidence 1245566777887765 5654443321110 03567778888999998 46766 65 44432 334444
Q ss_pred HHHHH
Q 012949 337 MLEAV 341 (452)
Q Consensus 337 li~~l 341 (452)
+++.+
T Consensus 381 lL~~l 385 (442)
T 3mcm_A 381 LLENI 385 (442)
T ss_dssp --CCH
T ss_pred HHHHH
Confidence 44443
No 184
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=92.27 E-value=9.3 Score=37.52 Aligned_cols=192 Identities=17% Similarity=0.206 Sum_probs=108.9
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHH---hccCCceeEEe----cchhhhhhhhhhhhh
Q 012949 144 TVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVR---DLEGARLPVLT----PNLKVILQRSILFQQ 216 (452)
Q Consensus 144 ~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~---~~~~~~l~~l~----~~~~~~i~r~~~~~~ 216 (452)
.++.+.-.++++.|.+.|++.|-+.--.. -.+.+. .+|-.+.++ +..+-++++++ .+.+
T Consensus 40 ~iD~~~l~~lv~~li~~Gv~Gl~v~GtTG--E~~~Ls-~~Er~~v~~~~v~~~~grvpViaGvg~~st~----------- 105 (314)
T 3qze_A 40 RLDWDSLAKLVDFHLQEGTNAIVAVGTTG--ESATLD-VEEHIQVIRRVVDQVKGRIPVIAGTGANSTR----------- 105 (314)
T ss_dssp CBCHHHHHHHHHHHHHHTCCEEEESSGGG--TGGGCC-HHHHHHHHHHHHHHHTTSSCEEEECCCSSHH-----------
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECcccc--ChhhCC-HHHHHHHHHHHHHHhCCCCcEEEeCCCcCHH-----------
Confidence 57999999999999999999887732111 123332 233333333 32222344333 1111
Q ss_pred ccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCC
Q 012949 217 CHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPV 296 (452)
Q Consensus 217 ~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~ 296 (452)
+ ..+-.+.|.++|+|-+.+..+- + ++-|.++.++-++.+.+ ..++++..|= .|.
T Consensus 106 ---e--------ai~la~~A~~~Gadavlv~~P~---y----~~~s~~~l~~~f~~va~---a~~lPiilYn-----~P~ 159 (314)
T 3qze_A 106 ---E--------AVALTEAAKSGGADACLLVTPY---Y----NKPTQEGMYQHFRHIAE---AVAIPQILYN-----VPG 159 (314)
T ss_dssp ---H--------HHHHHHHHHHTTCSEEEEECCC---S----SCCCHHHHHHHHHHHHH---HSCSCEEEEE-----CHH
T ss_pred ---H--------HHHHHHHHHHcCCCEEEEcCCC---C----CCCCHHHHHHHHHHHHH---hcCCCEEEEe-----Ccc
Confidence 1 1235567888999999887652 1 12355555555544443 3478876432 232
Q ss_pred --CCCCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEE-EeCCCcCcHHHHHHHHHHcCC
Q 012949 297 --EGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAV-HLHDTYGQSLPNILISLQMGI 373 (452)
Q Consensus 297 --~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~v-H~Hnd~GlA~ANaLaAl~aGa 373 (452)
....+++.+.+++ +. ...+.++||.|- ..++.+++ +..+. .+.+ -..++. .+.++.+|+
T Consensus 160 ~tg~~l~~~~~~~La----~~-pnIvgiKdssgd--~~~~~~~~----~~~~~-~f~v~~G~d~~------~l~~l~~Ga 221 (314)
T 3qze_A 160 RTSCDMLPETVERLS----KV-PNIIGIKEATGD--LQRAKEVI----ERVGK-DFLVYSGDDAT------AVELMLLGG 221 (314)
T ss_dssp HHSCCCCHHHHHHHH----TS-TTEEEEEECSCC--HHHHHHHH----HHSCT-TSEEEESCGGG------HHHHHHTTC
T ss_pred ccCCCCCHHHHHHHh----cC-CCEEEEEcCCCC--HHHHHHHH----HHcCC-CeEEEecChHH------HHHHHHCCC
Confidence 2245677776665 33 579999999883 45555544 44543 2444 444332 577889998
Q ss_pred CEEeecccCCCCCCCCCCCCCcccHHHHHHHHH
Q 012949 374 STVDCSVAGLGGCPYAKGASGNVATEDVVYMLS 406 (452)
Q Consensus 374 ~~VD~Sv~GlGecP~a~graGNaalE~vv~~L~ 406 (452)
+. .|.| ++|..-+.++...+
T Consensus 222 ~G---~is~----------~an~~P~~~~~l~~ 241 (314)
T 3qze_A 222 KG---NISV----------TANVAPRAMSDLCA 241 (314)
T ss_dssp CE---EEES----------GGGTCHHHHHHHHH
T ss_pred CE---EEec----------HHhhhHHHHHHHHH
Confidence 63 3443 34565565555554
No 185
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A*
Probab=92.15 E-value=2.2 Score=42.37 Aligned_cols=134 Identities=12% Similarity=0.096 Sum_probs=88.2
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHH-hCCCcEEEEEEeeecCCCCCCCCHHHHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAK-VLSIPVRGYVSCVVGCPVEGAIPPSKVAYVA 309 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak-~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a 309 (452)
+-++.+++-|+..+-++.. +. .-...|.+.++.++.+.+.++.++ +.|+.++.-+++. -..+++...+.+
T Consensus 82 ~~~~~~~~dgV~y~Eir~~--P~-~~~~~gl~~~~~v~~v~~~~~~a~~~~gi~~~lI~~~~------R~~~~~~a~~~~ 152 (326)
T 3pao_A 82 AYLQKCKAQNVVHVEPFFD--PQ-THTDRGIPFEVVLAGIRAALRDGEKLLGIRHGLILSFL------RHLSEEQAQKTL 152 (326)
T ss_dssp HHHHHHHHTTEEEECCEEC--HH-HHHTTTCCHHHHHHHHHHHHHHHHHHHCCEECCEEEEE------TTSCHHHHHHHH
T ss_pred HHHHHHHHcCCeEEEEEEC--hH-HhccCCCCHHHHHHHHHHHHHHHHhhCceEEEEEEEeC------CCCCHHHHHHHH
Confidence 4667777889887777653 32 222457899999999888888776 4788776433321 124567666666
Q ss_pred HHHHHC--CcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHH-cCCCEEe
Q 012949 310 KELHDM--GCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQ-MGISTVD 377 (452)
Q Consensus 310 ~~l~~~--Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~-aGa~~VD 377 (452)
+.+.++ ++..|-|+-.=....|....+.++..++. +.++.+|+..+.+ ..+...|++ .|+++|+
T Consensus 153 ~~a~~~~~~vvG~dL~g~E~~~~~~~~~~~~~~A~~~--gl~~~~HagE~~~--~~~i~~al~~lg~~rig 219 (326)
T 3pao_A 153 DQALPFRDAFIAVGLDSSEVGHPPSKFQRVFDRARSE--GFLTVAHAGEEGP--PEYIWEALDLLKVERID 219 (326)
T ss_dssp HHHGGGGGGCSEEEEESCCTTCCGGGGHHHHHHHHHT--TCEECEEESSSSC--HHHHHHHHHTTCCSSEE
T ss_pred HHHhhccccceeeCCCCCCCCCCHHHHHHHHHHHHHc--CCceeeecCCCCC--HHHHHHHHhcCCCceee
Confidence 666554 45556553222344677788877776653 4578888887754 467778996 8998763
No 186
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=92.12 E-value=2.6 Score=40.85 Aligned_cols=155 Identities=15% Similarity=0.181 Sum_probs=89.6
Q ss_pred HHHHHHHHHCCCCEEEEecCC------CCCcccccCCHHHHHHHHHhccC-CceeEEecchhhhhhhhhhhhhccchhhh
Q 012949 151 VELIRRLVSSGLPVVEATSFV------SPKWVPQLADARDVMEAVRDLEG-ARLPVLTPNLKVILQRSILFQQCHASVIS 223 (452)
Q Consensus 151 ~~i~~~L~~~Gv~~IEvG~~~------s~~~~p~~~D~e~v~~~i~~~~~-~~l~~l~~~~~~~i~r~~~~~~~~~~~i~ 223 (452)
..-++.++++||+.|-+|... .|.-.| -..++++...+.+.. +..+.++-.+. +.+|. .+.+.+
T Consensus 27 ~~sA~l~e~aG~d~ilvGdsl~~~~lG~~dt~~--vtldemi~h~~aV~r~~~~~~vvaD~p-----fgsy~-~~~~a~- 97 (264)
T 1m3u_A 27 YSFAKLFADEGLNVMLVGDSLGMTVQGHDSTLP--VTVADIAYHTAAVRRGAPNCLLLADLP-----FMAYA-TPEQAF- 97 (264)
T ss_dssp HHHHHHHHHHTCCEEEECTTHHHHTTCCSSSTT--CCHHHHHHHHHHHHHHCTTSEEEEECC-----TTSSS-SHHHHH-
T ss_pred HHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCC--cCHHHHHHHHHHHHhhCCCCcEEEECC-----CCCcC-CHHHHH-
Confidence 345788899999999998431 122111 244677766665422 22222222222 11233 222222
Q ss_pred hhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEee------e-cCCC
Q 012949 224 SNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCV------V-GCPV 296 (452)
Q Consensus 224 ~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~------~-g~p~ 296 (452)
+.+.+..++|++-|.+-... + +.+.|+.+.+.|++|.+.|-.+ + |.-.
T Consensus 98 -------~~a~rl~kaGa~aVklEgg~--------------e----~~~~I~al~~agipV~gHiGLtPq~v~~~ggf~v 152 (264)
T 1m3u_A 98 -------ENAATVMRAGANMVKIEGGE--------------W----LVETVQMLTERAVPVCGHLGLTPQSVNIFGGYKV 152 (264)
T ss_dssp -------HHHHHHHHTTCSEEECCCSG--------------G----GHHHHHHHHHTTCCEEEEEESCGGGHHHHTSSCC
T ss_pred -------HHHHHHHHcCCCEEEECCcH--------------H----HHHHHHHHHHCCCCeEeeecCCceeecccCCeEE
Confidence 23446667999999987651 1 2355677778899987666543 1 1112
Q ss_pred CCCCC--HHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCC
Q 012949 297 EGAIP--PSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPV 347 (452)
Q Consensus 297 ~~r~d--~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~ 347 (452)
-+|++ .+.+.+-++++.++||+.|.+.= .|. ++.+.+.+.++.
T Consensus 153 ~grt~~~a~~~i~rA~a~~eAGA~~ivlE~-----vp~---~~a~~it~~l~i 197 (264)
T 1m3u_A 153 QGRGDEAGDQLLSDALALEAAGAQLLVLEC-----VPV---ELAKRITEALAI 197 (264)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHTCCEEEEES-----CCH---HHHHHHHHHCSS
T ss_pred EeCCHHHHHHHHHHHHHHHHCCCcEEEEec-----CCH---HHHHHHHHhCCC
Confidence 23443 25677778889999999999953 354 355666677654
No 187
>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus} SCOP: c.1.15.3 PDB: 1bxc_A
Probab=92.09 E-value=1.6 Score=43.83 Aligned_cols=124 Identities=11% Similarity=-0.023 Sum_probs=62.0
Q ss_pred HHhHHHHHHcCCCEEEEEecCC--hHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCC--CCCCCCHHHH
Q 012949 230 LQGFEAAIAAGAKEVAIFASAS--EAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCP--VEGAIPPSKV 305 (452)
Q Consensus 230 ~~~ie~a~~~Gi~~V~i~~s~S--d~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p--~~~r~d~e~l 305 (452)
++.++.|.+.|++.|.+..+.. +...........+...+.+.++.++|++.|..|...|...-..| ...-.+++.+
T Consensus 119 ~~~i~~A~~LGa~~vv~~~G~~g~~~~~~~~~~~~~~~~~e~L~~l~~~a~~~g~gv~l~lE~~~~~~~~~~~~~t~~~~ 198 (387)
T 1bxb_A 119 LETMDLGAELGAEIYVVWPGREGAEVEATGKARKVWDWVREALNFMAAYAEDQGYGYRFALEPKPNEPRGDIYFATVGSM 198 (387)
T ss_dssp HHHHHHHHHHTCCEEEECCTTCEESCGGGCGGGTHHHHHHHHHHHHHHHHHHHTCCCEEEECCCSSSSSSEESSCSHHHH
T ss_pred HHHHHHHHHhCCCEEEECCCCCCccCCccCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCCCCCCCCccCCCHHHH
Confidence 3577888899999997764311 00001112233566777788888999998433343344321000 0011244554
Q ss_pred HHHHHHHHHCCcCE-EE-EcCCcCCCcH--HHHHHHHHHHHHhCCCccEEEEeCCCcC
Q 012949 306 AYVAKELHDMGCFE-IS-LGDTIGVGTP--GTVVPMLEAVMAVVPVEKLAVHLHDTYG 359 (452)
Q Consensus 306 ~~~a~~l~~~Gad~-I~-L~DT~G~~~P--~~v~~li~~l~~~~p~~~l~vH~Hnd~G 359 (452)
.+++ .+.+.+. +. .-|+. .+.. ..+.+.++.+.. .+- ...+|++|..+
T Consensus 199 ~~ll---~~v~~~~~vgl~lD~g-H~~~~g~d~~~~l~~~~~-~~~-i~~vHl~D~~~ 250 (387)
T 1bxb_A 199 LAFI---HTLDRPERFGLNPEFA-HETMAGLNFVHAVAQALD-AGK-LFHIDLNDQRM 250 (387)
T ss_dssp HHHH---TTSSSGGGEEECCBHH-HHHHTTCCHHHHHHHHHH-TTC-BCCEECCBCCS
T ss_pred HHHH---HHcCCccceEEEEecC-cccccCCCHHHHHHHhcc-CCc-EEEEEeCCCCC
Confidence 4444 4445433 33 34652 2211 123344454442 122 35789998754
No 188
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=91.99 E-value=1.7 Score=41.11 Aligned_cols=182 Identities=11% Similarity=0.115 Sum_probs=101.9
Q ss_pred HHCCCCEEEEecCCCC-CcccccCCHHHHHHHHH---hccCCceeEEecchhhhhhhhhhhhhccchhhhhhhhccHHhH
Q 012949 158 VSSGLPVVEATSFVSP-KWVPQLADARDVMEAVR---DLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLWVYLQGF 233 (452)
Q Consensus 158 ~~~Gv~~IEvG~~~s~-~~~p~~~D~e~v~~~i~---~~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~~~~~~i 233 (452)
.+.|-++||+=+.-.. ..-|+. .+++.++ +..++.+-+|++.+.. -+.|....-++| .+|+
T Consensus 18 ~~~GAdRIELc~~L~~GGlTPS~----g~i~~~~~~~~~~~ipV~vMIRPR~G----dF~Ys~~E~~~M-------~~Di 82 (224)
T 2bdq_A 18 DKAIISRVELCDNLAVGGTTPSY----GVIKEANQYLHEKGISVAVMIRPRGG----NFVYNDLELRIM-------EEDI 82 (224)
T ss_dssp CTTTCCEEEEEBCGGGTCBCCCH----HHHHHHHHHHHHTTCEEEEECCSSSS----CSCCCHHHHHHH-------HHHH
T ss_pred HHcCCCEEEEcCCcccCCcCCCH----HHHHHHHHhhhhcCCceEEEECCCCC----CCcCCHHHHHHH-------HHHH
Confidence 4679999999642110 111322 3445554 4446677777755441 133444333333 4699
Q ss_pred HHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHHHHH
Q 012949 234 EAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELH 313 (452)
Q Consensus 234 e~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~ 313 (452)
+.+++.|++.|.+-+-..|-.+. .+.++++++.|+ |+++. +=.+| |.. ......+..+.+.
T Consensus 83 ~~~~~~GadGvV~G~Lt~dg~iD----------~~~~~~Li~~a~--~~~vT--FHRAF---D~~--~~~d~~~ale~L~ 143 (224)
T 2bdq_A 83 LRAVELESDALVLGILTSNNHID----------TEAIEQLLPATQ--GLPLV--FHMAF---DVI--PKSDQKKSIDQLV 143 (224)
T ss_dssp HHHHHTTCSEEEECCBCTTSSBC----------HHHHHHHHHHHT--TCCEE--ECGGG---GGS--CTTTHHHHHHHHH
T ss_pred HHHHHcCCCEEEEeeECCCCCcC----------HHHHHHHHHHhC--CCeEE--EECch---hcc--CCcCHHHHHHHHH
Confidence 99999999998886644442111 355567777775 56654 33334 211 1123345678889
Q ss_pred HCCcCEEEEcCCcCCCc---HHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHH-HcCCCEEeec
Q 012949 314 DMGCFEISLGDTIGVGT---PGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISL-QMGISTVDCS 379 (452)
Q Consensus 314 ~~Gad~I~L~DT~G~~~---P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl-~aGa~~VD~S 379 (452)
++|+++|- |.|... ..+-.++++.+.+...+ +|.+=. --|.-..|.-.-+ +.|++.|+.|
T Consensus 144 ~lGv~rIL---TSG~~~~~~a~~g~~~L~~Lv~~a~~-ri~Im~--GgGV~~~Ni~~l~~~tGv~e~H~s 207 (224)
T 2bdq_A 144 ALGFTRIL---LHGSSNGEPIIENIKHIKALVEYANN-RIEIMV--GGGVTAENYQYICQETGVKQAHGT 207 (224)
T ss_dssp HTTCCEEE---ECSCSSCCCGGGGHHHHHHHHHHHTT-SSEEEE--CSSCCTTTHHHHHHHHTCCEEEET
T ss_pred HcCCCEEE---CCCCCCCCcHHHHHHHHHHHHHhhCC-CeEEEe--CCCCCHHHHHHHHHhhCCCEEccc
Confidence 99999998 666543 34444555555554332 222211 1244445555545 4799999986
No 189
>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ...
Probab=91.79 E-value=5.9 Score=39.93 Aligned_cols=137 Identities=10% Similarity=0.081 Sum_probs=84.5
Q ss_pred HHhHHHHHHcCCCEEEEEecCChHHHhh----------hcCCCHHHHHHHHHHHHHHHHh-CCCcEEEEEEeeecCCCCC
Q 012949 230 LQGFEAAIAAGAKEVAIFASASEAFSKS----------NINCSIEDSLVRYRAVAHAAKV-LSIPVRGYVSCVVGCPVEG 298 (452)
Q Consensus 230 ~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~----------~~~~s~e~~l~~~~~~v~~Ak~-~G~~V~~~l~~~~g~p~~~ 298 (452)
.+-++.+.+-|+..+-++.... .|... .-|.+.++.++.+.+.++.+++ .|+.++.-+++.
T Consensus 81 ~e~~ed~a~dgV~Y~Eir~~P~-~~~~~~~~~~~~~~~~~gl~~~~vv~~v~~~~~~a~~~~gi~~~lI~~~~------- 152 (367)
T 3iar_A 81 YEFVEMKAKEGVVYVEVRYSPH-LLANSKVEPIPWNQAEGDLTPDEVVALVGQGLQEGERDFGVKARSILCCM------- 152 (367)
T ss_dssp HHHHHHHHTTTEEEEEEEECGG-GGCSSSCSSCGGGCCCCSCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEE-------
T ss_pred HHHHHHHHHcCCEEEEEEecHH-HhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHhcCCeEEEEEEeC-------
Confidence 3466777788998888876421 12211 1278999999998888887754 698887544432
Q ss_pred CCCHHHHHHHHHHHHHC---CcCEEEEcCCcCCCcH---HHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHH-c
Q 012949 299 AIPPSKVAYVAKELHDM---GCFEISLGDTIGVGTP---GTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQ-M 371 (452)
Q Consensus 299 r~d~e~l~~~a~~l~~~---Gad~I~L~DT~G~~~P---~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~-a 371 (452)
|..++...+.++.+.++ |+-.|-|+-.-....| ....+.++..++. +.++.+|+..+.+. .+...|+. .
T Consensus 153 R~~~~~a~e~~~la~~~~~~~vvG~dL~g~E~~~~~~~~~~f~~~f~~A~~~--gl~~~~HagE~~~~--~~i~~al~~l 228 (367)
T 3iar_A 153 RHQPNWSPKVVELCKKYQQQTVVAIDLAGDETIPGSSLLPGHVQAYQEAVKS--GIHRTVHAGEVGSA--EVVKEAVDIL 228 (367)
T ss_dssp TTCGGGHHHHHHHHHHTTTTTEEEEEEESCTTSTTGGGCHHHHHHHHHHHHH--TCEEEEEESSSSCH--HHHHHHHHTS
T ss_pred CCCCHHHHHHHHHHHhhCCCCEEEEcCCCcccCCCcchHHHHHHHHHHHHHc--CCeeEEecCCcCCh--HHHHHHHHcc
Confidence 11122233444444443 4555555422223344 5777777766653 45788999887663 57778895 8
Q ss_pred CCCEEee
Q 012949 372 GISTVDC 378 (452)
Q Consensus 372 Ga~~VD~ 378 (452)
|+++|+=
T Consensus 229 g~~RIgH 235 (367)
T 3iar_A 229 KTERLGH 235 (367)
T ss_dssp CCSEEEE
T ss_pred CCceeee
Confidence 9998643
No 190
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=91.71 E-value=2 Score=39.81 Aligned_cols=175 Identities=14% Similarity=0.103 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHCCCCEEEEe----cCCCCCcccccCCHHHHHHHHHhccCCceeEEecchhhhhhhhhhhhhccchhhhh
Q 012949 149 VKVELIRRLVSSGLPVVEAT----SFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISS 224 (452)
Q Consensus 149 ~k~~i~~~L~~~Gv~~IEvG----~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~ 224 (452)
+-.++++.+.+.|++.|.+- .+. +.. .. +.++.+++..+.. .++-+.-
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~~~~-----~~~-~~-~~i~~i~~~~~ip--v~v~ggi------------------- 83 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDAAFG-----RGS-NH-ELLAEVVGKLDVQ--VELSGGI------------------- 83 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHHHTT-----SCC-CH-HHHHHHHHHCSSE--EEEESSC-------------------
T ss_pred CHHHHHHHHHHcCCCEEEEEcCccccc-----CCC-hH-HHHHHHHHhcCCc--EEEECCC-------------------
Confidence 56788999999999999983 332 111 22 4556665543433 3321110
Q ss_pred hhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeee---cCCCCCC--
Q 012949 225 NLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVV---GCPVEGA-- 299 (452)
Q Consensus 225 ~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~---g~p~~~r-- 299 (452)
...++++.++++|++.|.+-.. .+.+...+.+..++.|..+...+..-. +.....+
T Consensus 84 ---~~~~~~~~~l~~Gad~V~lg~~----------------~l~~p~~~~~~~~~~g~~~~~~ld~~~~~~~~~v~~~g~ 144 (244)
T 2y88_A 84 ---RDDESLAAALATGCARVNVGTA----------------ALENPQWCARVIGEHGDQVAVGLDVQIIDGEHRLRGRGW 144 (244)
T ss_dssp ---CSHHHHHHHHHTTCSEEEECHH----------------HHHCHHHHHHHHHHHGGGEEEEEEEEEETTEEEEEEGGG
T ss_pred ---CCHHHHHHHHHcCCCEEEECch----------------HhhChHHHHHHHHHcCCCEEEEEeccccCCCCEEEECCc
Confidence 0124788999999999887542 122222233334444433332222110 0000000
Q ss_pred -CCHHHHHHHHHHHHHCCcCEEEEcCCc--CCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHH-HHHHHHHHc---C
Q 012949 300 -IPPSKVAYVAKELHDMGCFEISLGDTI--GVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSL-PNILISLQM---G 372 (452)
Q Consensus 300 -~d~e~l~~~a~~l~~~Gad~I~L~DT~--G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~-ANaLaAl~a---G 372 (452)
.+.+...+.++.+.++|++.|.+-+.. |...+. -.++++.+++..+ +++.. +=|... .+...++++ |
T Consensus 145 ~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~~~~~g~-~~~~~~~l~~~~~-ipvia----~GGI~~~~d~~~~~~~~~~G 218 (244)
T 2y88_A 145 ETDGGDLWDVLERLDSEGCSRFVVTDITKDGTLGGP-NLDLLAGVADRTD-APVIA----SGGVSSLDDLRAIATLTHRG 218 (244)
T ss_dssp TEEEEEHHHHHHHHHHTTCCCEEEEETTTTTTTSCC-CHHHHHHHHTTCS-SCEEE----ESCCCSHHHHHHHHTTGGGT
T ss_pred cCCCCCHHHHHHHHHhCCCCEEEEEecCCccccCCC-CHHHHHHHHHhCC-CCEEE----ECCCCCHHHHHHHHhhccCC
Confidence 000134567778888999988775522 221111 2445666666442 34443 235553 777777777 8
Q ss_pred CCEE
Q 012949 373 ISTV 376 (452)
Q Consensus 373 a~~V 376 (452)
|+.|
T Consensus 219 ad~v 222 (244)
T 2y88_A 219 VEGA 222 (244)
T ss_dssp EEEE
T ss_pred CCEE
Confidence 7654
No 191
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=91.70 E-value=10 Score=36.75 Aligned_cols=179 Identities=14% Similarity=0.138 Sum_probs=100.4
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHH---hccCCceeEEecchhhhhhhhhhhhhccch
Q 012949 144 TVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVR---DLEGARLPVLTPNLKVILQRSILFQQCHAS 220 (452)
Q Consensus 144 ~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~---~~~~~~l~~l~~~~~~~i~r~~~~~~~~~~ 220 (452)
.++.+.-.++++.|.+.|++.|-+.--... .+.+. .+|-.+.++ +..+-++++++-.-. ....+
T Consensus 17 ~iD~~~l~~lv~~li~~Gv~gl~~~GttGE--~~~Ls-~~Er~~v~~~~~~~~~grvpviaGvg~----------~~t~~ 83 (294)
T 2ehh_A 17 EVDYEALGNLIEFHVDNGTDAILVCGTTGE--SPTLT-FEEHEKVIEFAVKRAAGRIKVIAGTGG----------NATHE 83 (294)
T ss_dssp EECHHHHHHHHHHHHTTTCCEEEESSTTTT--GGGSC-HHHHHHHHHHHHHHHTTSSEEEEECCC----------SCHHH
T ss_pred CcCHHHHHHHHHHHHHCCCCEEEECccccC--hhhCC-HHHHHHHHHHHHHHhCCCCcEEEecCC----------CCHHH
Confidence 478899999999999999998877422211 23342 233333333 222224444321000 00011
Q ss_pred hhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCC--CC
Q 012949 221 VISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPV--EG 298 (452)
Q Consensus 221 ~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~--~~ 298 (452)
. .+-.+.|.++|+|-+.+..+- + ++-|.++.++-+..+.+ ..++++..|= .|. ..
T Consensus 84 a--------i~la~~A~~~Gadavlv~~P~---y----~~~s~~~l~~~f~~va~---a~~lPiilYn-----~P~~tg~ 140 (294)
T 2ehh_A 84 A--------VHLTAHAKEVGADGALVVVPY---Y----NKPTQRGLYEHFKTVAQ---EVDIPIIIYN-----IPSRTCV 140 (294)
T ss_dssp H--------HHHHHHHHHTTCSEEEEECCC---S----SCCCHHHHHHHHHHHHH---HCCSCEEEEE-----CHHHHSC
T ss_pred H--------HHHHHHHHhcCCCEEEECCCC---C----CCCCHHHHHHHHHHHHH---hcCCCEEEEe-----CCcccCc
Confidence 1 234567788999999887652 1 22355666665544433 4477776433 232 22
Q ss_pred CCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEE-EeCCCcCcHHHHHHHHHHcCCCE
Q 012949 299 AIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAV-HLHDTYGQSLPNILISLQMGIST 375 (452)
Q Consensus 299 r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~v-H~Hnd~GlA~ANaLaAl~aGa~~ 375 (452)
..+++.+.++++. . ...+.++|+.|- ..++.++++. .+. .+.+ -.+|+ ..+.++.+|++.
T Consensus 141 ~l~~~~~~~La~~---~-pnivgiKds~gd--~~~~~~~~~~----~~~-~f~v~~G~d~------~~~~~l~~G~~G 201 (294)
T 2ehh_A 141 EISVDTMFKLASE---C-ENIVASKESTPN--MDRISEIVKR----LGE-SFSVLSGDDS------LTLPMMALGAKG 201 (294)
T ss_dssp CCCHHHHHHHHHH---C-TTEEEEEECCSC--HHHHHHHHHH----HCT-TSEEEESSGG------GHHHHHHTTCCE
T ss_pred CCCHHHHHHHHhh---C-CCEEEEEeCCCC--HHHHHHHHHh----cCC-CeEEEECcHH------HHHHHHHCCCCE
Confidence 4678888877632 2 569999999885 4556555543 342 3443 44443 356677899763
No 192
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=91.63 E-value=2.6 Score=42.12 Aligned_cols=139 Identities=20% Similarity=0.083 Sum_probs=87.4
Q ss_pred hHHHHHHcCCCEEEEEec--------CChHH--HhhhcCCCHHHHHHHHHHHHHHHHhC---CCcEEEEEEeeecCCCCC
Q 012949 232 GFEAAIAAGAKEVAIFAS--------ASEAF--SKSNINCSIEDSLVRYRAVAHAAKVL---SIPVRGYVSCVVGCPVEG 298 (452)
Q Consensus 232 ~ie~a~~~Gi~~V~i~~s--------~Sd~~--~~~~~~~s~e~~l~~~~~~v~~Ak~~---G~~V~~~l~~~~g~p~~~ 298 (452)
..+.|.++|.|.|.|-.. .|+.. ....+|-|.++=.+.+.++++.+|+. .+.|.+-|+.. .. ..+
T Consensus 148 AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~-~~-~~~ 225 (343)
T 3kru_A 148 AAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSAD-DY-MEG 225 (343)
T ss_dssp HHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECC-CS-STT
T ss_pred HHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeech-hh-hcc
Confidence 556777899999888632 23322 22346778888888888999999885 35666556531 11 122
Q ss_pred CCCHHHHHHHHHHHHHCCcCEEEEcC--CcCC---CcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcC-
Q 012949 299 AIPPSKVAYVAKELHDMGCFEISLGD--TIGV---GTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMG- 372 (452)
Q Consensus 299 r~d~e~l~~~a~~l~~~Gad~I~L~D--T~G~---~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aG- 372 (452)
..+.+...++++.+.++ +|.|.+.. +... ..|..-.++++.+++.++. +|..=.-- .....+..+++.|
T Consensus 226 g~~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~~i-PVi~~Ggi---~t~e~Ae~~l~~G~ 300 (343)
T 3kru_A 226 GINIDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRCNI-KTSAVGLI---TTQELAEEILSNER 300 (343)
T ss_dssp SCCHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTC-EEEEESSC---CCHHHHHHHHHTTS
T ss_pred CccHHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhcCc-ccceeeee---eHHHHHHHHHhchh
Confidence 35788999999999999 99998841 1110 1233335667788887653 44332210 1245677888888
Q ss_pred CCEEe
Q 012949 373 ISTVD 377 (452)
Q Consensus 373 a~~VD 377 (452)
||.|-
T Consensus 301 aD~V~ 305 (343)
T 3kru_A 301 ADLVA 305 (343)
T ss_dssp CSEEE
T ss_pred hHHHH
Confidence 77653
No 193
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=91.63 E-value=4.8 Score=39.40 Aligned_cols=184 Identities=15% Similarity=0.127 Sum_probs=105.5
Q ss_pred CHHHHHHHHHHHHHC----CCCEEEEecCC-----CCCcccccCCHHHHHHHHHhcc-CCceeEEecchhhhhhhhhhhh
Q 012949 146 PTGVKVELIRRLVSS----GLPVVEATSFV-----SPKWVPQLADARDVMEAVRDLE-GARLPVLTPNLKVILQRSILFQ 215 (452)
Q Consensus 146 ~~~~k~~i~~~L~~~----Gv~~IEvG~~~-----s~~~~p~~~D~e~v~~~i~~~~-~~~l~~l~~~~~~~i~r~~~~~ 215 (452)
+.++..++++.|.++ ++..+=-++|- +|.-.-.+ .-++=++.+++.. ...+.+++--..
T Consensus 32 ~~e~~~~~A~~lk~~~~~~~~~~v~k~~f~KapRTs~~sf~G~-g~~~GL~~L~~~~~e~Glp~~Tev~d---------- 100 (285)
T 3sz8_A 32 SLDFTLDVCGEYVAVTRKLGIPFVFKASFDKANRSSIHSYRGV-GLDEGLKIFAEVKARFGVPVITDVHE---------- 100 (285)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCEEEEEESCCTTCSSTTSCCCS-CHHHHHHHHHHHHHHHCCCEEEECCS----------
T ss_pred CHHHHHHHHHHHHHHHHhheeeeEEEeecccCCCCCCCCcCCc-CHHHHHHHHHHHHHhcCCeEEEEeCC----------
Confidence 788999999999876 47655544432 22111111 1233344444321 223333332111
Q ss_pred hccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCC
Q 012949 216 QCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCP 295 (452)
Q Consensus 216 ~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p 295 (452)
.+.++.+.+. ++.+.|... +.. | . ++++++-+.|.+|. ++.
T Consensus 101 --------------~~~v~~l~~~-vd~lqIgA~--~~~---n--------~----~LLr~va~~gkPVi--lK~----- 141 (285)
T 3sz8_A 101 --------------AEQAAPVAEI-ADVLQVPAF--LAR---Q--------T----DLVVAIAKAGKPVN--VKK----- 141 (285)
T ss_dssp --------------GGGHHHHHTT-CSEEEECGG--GTT---C--------H----HHHHHHHHTSSCEE--EEC-----
T ss_pred --------------HHHHHHHHHh-CCEEEECcc--ccC---C--------H----HHHHHHHccCCcEE--EeC-----
Confidence 1366777777 898887642 110 0 1 24455556788876 332
Q ss_pred CCCC-CCHHHHHHHHHHHHHCCcCEEEEcCCcCCC-cHHHH--HHHHHHHHHhCCCccEEE-EeCCC----------cC-
Q 012949 296 VEGA-IPPSKVAYVAKELHDMGCFEISLGDTIGVG-TPGTV--VPMLEAVMAVVPVEKLAV-HLHDT----------YG- 359 (452)
Q Consensus 296 ~~~r-~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~-~P~~v--~~li~~l~~~~p~~~l~v-H~Hnd----------~G- 359 (452)
+. .+++++...++.+.+.|.+.|.|+.-.-.. .+..+ -.-+..+++.+++.+|.+ ..|-. .|
T Consensus 142 --G~~~t~~ei~~ave~i~~~Gn~~i~L~erg~~y~~~~~~vdl~~i~~lk~~~~~~pV~~D~sHs~q~p~~~~~~s~G~ 219 (285)
T 3sz8_A 142 --PQFMSPTQLKHVVSKCGEVGNDRVMLCERGSSFGYDNLVVDMLGFRQMAETTGGCPVIFDVTHSLQCRDPLGDASGGR 219 (285)
T ss_dssp --CTTSCGGGTHHHHHHHHHTTCCCEEEEECCEECSSSCEECCTTHHHHHHHHTTSCCEEEETTTTCC------------
T ss_pred --CCCCCHHHHHHHHHHHHHcCCCcEEEEeCCCCCCCCcCccCHHHHHHHHHhCCCCCEEEeCCCccccCCCcCCCCCCc
Confidence 23 477888888899999999878887633211 11100 223566788887568888 77752 22
Q ss_pred --cHHHHHHHHHHcCCC--EEeeccc
Q 012949 360 --QSLPNILISLQMGIS--TVDCSVA 381 (452)
Q Consensus 360 --lA~ANaLaAl~aGa~--~VD~Sv~ 381 (452)
+...-+++|+.+||+ .|+.=..
T Consensus 220 r~~v~~~a~AAvA~GA~gl~IE~H~~ 245 (285)
T 3sz8_A 220 RRQVLDLARAGIAVGIAGLFLEAHPD 245 (285)
T ss_dssp ---HHHHHHHHHHHCCSEEEEEEESC
T ss_pred hhhHHHHHHHHHHhCCCEEEEEeccC
Confidence 337788999999999 7765444
No 194
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=91.59 E-value=0.77 Score=45.22 Aligned_cols=110 Identities=18% Similarity=0.074 Sum_probs=74.0
Q ss_pred EEeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcH------HHHHHHHHHHHHhCCCc--c--EEEEeCCC
Q 012949 288 VSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTP------GTVVPMLEAVMAVVPVE--K--LAVHLHDT 357 (452)
Q Consensus 288 l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P------~~v~~li~~l~~~~p~~--~--l~vH~Hnd 357 (452)
|+.+.|+|.. ..+.+.-..-++.+.+.||+.|-+.=-+|.+.- +.+++-|+.+++..++. + |+.-.=++
T Consensus 86 V~tVigFP~G-~~~~e~K~~Ea~~Av~~GAdEIDmVinig~lk~~~~g~~~~V~~eI~~v~~a~~~~~lKVIlEt~~Lt~ 164 (297)
T 4eiv_A 86 VCAAVNFPEG-TGTPDTVSLEAVGALKDGADEIECLIDWRRMNENVADGESRIRLLVSEVKKVVGPKTLKVVLSGGELQG 164 (297)
T ss_dssp EEEEESTTTC-CCCHHHHHHHHHHHHHTTCSEEEEECCTHHHHHCHHHHHHHHHHHHHHHHHHHTTSEEEEECCSSCCCC
T ss_pred EEEEecCCCC-CCCHHHHHHHHHHHHHcCCCEEEeeeeHHHHhcccCCcHHHHHHHHHHHHHHhcCCceEEEEecccCCc
Confidence 4455677864 556666666777888899999988877777554 45777777888766432 2 22222233
Q ss_pred cCcHHHHHHHHHHcCCCEEeecccCCCCCCCCCCCCCcccHHHHHHHHHc
Q 012949 358 YGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSG 407 (452)
Q Consensus 358 ~GlA~ANaLaAl~aGa~~VD~Sv~GlGecP~a~graGNaalE~vv~~L~~ 407 (452)
.-+=...+..|+++|||.|=+|-+ .+ +|++.+|++..+.+.
T Consensus 165 ~e~i~~A~~ia~~AGADFVKTSTG-f~--------~~gAT~edV~lM~~~ 205 (297)
T 4eiv_A 165 GDIISRAAVAALEGGADFLQTSSG-LG--------ATHATMFTVHLISIA 205 (297)
T ss_dssp HHHHHHHHHHHHHHTCSEEECCCS-SS--------SCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEcCCC-CC--------CCCCCHHHHHHHHHH
Confidence 332235678899999999998854 43 457888888777653
No 195
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=91.57 E-value=2.8 Score=42.22 Aligned_cols=134 Identities=19% Similarity=0.123 Sum_probs=85.3
Q ss_pred HhHHHHHHcCCCEEEEEecC--------ChHHHh--hhcCCCHHHHHHHHHHHHHHHHhC-CC-cEEEEEEeeecCCCCC
Q 012949 231 QGFEAAIAAGAKEVAIFASA--------SEAFSK--SNINCSIEDSLVRYRAVAHAAKVL-SI-PVRGYVSCVVGCPVEG 298 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~--------Sd~~~~--~~~~~s~e~~l~~~~~~v~~Ak~~-G~-~V~~~l~~~~g~p~~~ 298 (452)
+..++|.++|.|.|.|-.+- |+..++ ..+|-|.+.=.+.+.++++.+|+. |- .|.+-++..- ...+
T Consensus 157 ~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls~~~--~~~g 234 (362)
T 4ab4_A 157 SGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLAPRA--DAHD 234 (362)
T ss_dssp HHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTC--CSSS
T ss_pred HHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEeeccc--cccc
Confidence 35667888999999987652 333222 235778887788888888888764 43 4554454210 0011
Q ss_pred ---CCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcC-CC
Q 012949 299 ---AIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMG-IS 374 (452)
Q Consensus 299 ---r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aG-a~ 374 (452)
..+.+...++++.+.++|+|.|.+.... ..| ++++.+++.++. +|-.=. |.-...+..+++.| ||
T Consensus 235 ~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~--~~~----~~~~~ik~~~~i-Pvi~~G----git~e~a~~~l~~g~aD 303 (362)
T 4ab4_A 235 MGDADRAETFTYVARELGKRGIAFICSRERE--ADD----SIGPLIKEAFGG-PYIVNE----RFDKASANAALASGKAD 303 (362)
T ss_dssp CCCTTHHHHHHHHHHHHHHTTCSEEEEECCC--CTT----CCHHHHHHHHCS-CEEEES----SCCHHHHHHHHHTTSCS
T ss_pred cCCCCcHHHHHHHHHHHHHhCCCEEEECCCC--CCH----HHHHHHHHHCCC-CEEEeC----CCCHHHHHHHHHcCCcc
Confidence 1224678889999999999999886532 112 467778887764 333221 22457788899998 78
Q ss_pred EEe
Q 012949 375 TVD 377 (452)
Q Consensus 375 ~VD 377 (452)
.|-
T Consensus 304 ~V~ 306 (362)
T 4ab4_A 304 AVA 306 (362)
T ss_dssp EEE
T ss_pred EEE
Confidence 664
No 196
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=91.56 E-value=2.4 Score=41.17 Aligned_cols=131 Identities=13% Similarity=0.144 Sum_probs=78.3
Q ss_pred hHHHHHHcCCC---EEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhC-CCcEEEEEEeeecCCCCCCCCHHHHHH
Q 012949 232 GFEAAIAAGAK---EVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVL-SIPVRGYVSCVVGCPVEGAIPPSKVAY 307 (452)
Q Consensus 232 ~ie~a~~~Gi~---~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~-G~~V~~~l~~~~g~p~~~r~d~e~l~~ 307 (452)
.++.+.++|+| .|.+-++.-.......++.+.+. +.++++.+|+. +++|.+-+. ++ .+.+.+.+
T Consensus 111 ~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~----~~~ii~~vr~~~~~Pv~vK~~-----~~---~~~~~~~~ 178 (314)
T 2e6f_A 111 MVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEA----MRTYLQQVSLAYGLPFGVKMP-----PY---FDIAHFDT 178 (314)
T ss_dssp HHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHH----HHHHHHHHHHHHCSCEEEEEC-----CC---CCHHHHHH
T ss_pred HHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHH----HHHHHHHHHHhcCCCEEEEEC-----CC---CCHHHHHH
Confidence 55666677888 77775431111111223445443 34445555543 667654332 22 36778889
Q ss_pred HHHHHHHCC-cCEEEEcCCcC----------------------CCcH---HHHHHHHHHHHHhCCCccEEEEeCCCcCcH
Q 012949 308 VAKELHDMG-CFEISLGDTIG----------------------VGTP---GTVVPMLEAVMAVVPVEKLAVHLHDTYGQS 361 (452)
Q Consensus 308 ~a~~l~~~G-ad~I~L~DT~G----------------------~~~P---~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA 361 (452)
+++.+.++| +|.|.+.++.| +..| ....++++.+++.+|.++|-.=+ |..
T Consensus 179 ~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~~ipvi~~G----GI~ 254 (314)
T 2e6f_A 179 AAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCPDKLVFGCG----GVY 254 (314)
T ss_dssp HHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCTTSEEEEES----SCC
T ss_pred HHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcCCCCEEEEC----CCC
Confidence 999999999 99999888662 1111 12347788888887555654432 332
Q ss_pred -HHHHHHHHHcCCCEEee
Q 012949 362 -LPNILISLQMGISTVDC 378 (452)
Q Consensus 362 -~ANaLaAl~aGa~~VD~ 378 (452)
...+..++.+||+.|-.
T Consensus 255 ~~~da~~~l~~GAd~V~i 272 (314)
T 2e6f_A 255 SGEDAFLHILAGASMVQV 272 (314)
T ss_dssp SHHHHHHHHHHTCSSEEE
T ss_pred CHHHHHHHHHcCCCEEEE
Confidence 35677778899987744
No 197
>2h9a_A Carbon monoxide dehydrogenase corrinoid/iron- sulfur protein, gamma subunit; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_A*
Probab=91.51 E-value=0.94 Score=47.12 Aligned_cols=171 Identities=13% Similarity=0.145 Sum_probs=97.9
Q ss_pred CCHHHHHHHHHH-----HHHCC----CCEEEEecCCCCCcccccCCHHHHHHHHHh---ccCCceeEEecchhhhhhhhh
Q 012949 145 VPTGVKVELIRR-----LVSSG----LPVVEATSFVSPKWVPQLADARDVMEAVRD---LEGARLPVLTPNLKVILQRSI 212 (452)
Q Consensus 145 ~~~~~k~~i~~~-----L~~~G----v~~IEvG~~~s~~~~p~~~D~e~v~~~i~~---~~~~~l~~l~~~~~~~i~r~~ 212 (452)
++.+...+.++. ..+.| +|.|.+++.. .|++.+...++. ..++.+..- ++.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~g~~~~aD~I~l~~~~--------~dpe~~~~~Vk~V~e~~dvPlsID-~dp-------- 164 (445)
T 2h9a_A 102 LSEGEIKERVEKINKLVFDRVGQMHSVNLVALKGSS--------QDAATFAKAVATAREVTDLPFILI-GTP-------- 164 (445)
T ss_dssp SCHHHHHHHHHHHHTCEEEETTEEEECCEEEEECTT--------CCHHHHHHHHHHHHHHCCSCEEEE-SCH--------
T ss_pred CChHhHHHHHHHhhhHHHHhhcccccCcEEEEeCCC--------CCHHHHHHHHHHHHHhcCCCEEEE-CCH--------
Confidence 344444444444 23456 9999998732 244555555543 345555443 332
Q ss_pred hhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeee
Q 012949 213 LFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVV 292 (452)
Q Consensus 213 ~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~ 292 (452)
+-+++|++.+.+.=-+..+++. +++.++...|++.+..|.+ .
T Consensus 165 ------------------~vleaale~~~d~~pLIns~t~---------------en~~~~~~la~~y~~~vV~-----~ 206 (445)
T 2h9a_A 165 ------------------EQLAAALETEGANNPLLYAATA---------------DNYEQMVELAKKYNVPLTV-----S 206 (445)
T ss_dssp ------------------HHHHHHHHHHGGGCCEEEEECT---------------TTHHHHHHHHHHHTCCEEE-----E
T ss_pred ------------------HHHHHHHHhcCCCCCEEEECCH---------------HHHHHHHHHHHHhCCeEEE-----E
Confidence 3778888887752122233333 2345667888888988763 2
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhC---CCcc-----EEEEeCCCcCcHHHH
Q 012949 293 GCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVV---PVEK-----LAVHLHDTYGQSLPN 364 (452)
Q Consensus 293 g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~---p~~~-----l~vH~Hnd~GlA~AN 364 (452)
+ + +.+.+.++.+.+.++|.+.|.| |..... -....+-+..+|+.. ++.+ +..-..-+--+....
T Consensus 207 ~-~-----~l~~l~~lv~~a~~~Gi~~IiL-DP~~~~-~~~sl~~~~~IR~~al~~~d~~lg~P~i~~vs~~d~~~ea~l 278 (445)
T 2h9a_A 207 A-K-----GLDALAELVQKITALGYKNLIL-DPQPEN-ISEGLFYQTQIRRLAIKKLFRPFGYPTIAFALDENPYQAVME 278 (445)
T ss_dssp C-S-----SHHHHHHHHHHHHHTTCCCEEE-ECCCSS-HHHHHHHHHHHHHHHHHSCCGGGCSCBEEECCCSSHHHHHHH
T ss_pred c-C-----CHHHHHHHHHHHHHCCCCcEEE-cCCchh-HHHHHHHHHHHHHhhhcCCCcccCCCeeecCCchhHHHHHHH
Confidence 1 1 5788999999999999988886 765322 334444555555542 2211 333332222245555
Q ss_pred HHHHHHcCCCEEee
Q 012949 365 ILISLQMGISTVDC 378 (452)
Q Consensus 365 aLaAl~aGa~~VD~ 378 (452)
+..+++.||+++=+
T Consensus 279 A~~~~~~GasIl~~ 292 (445)
T 2h9a_A 279 ASVYIAKYAGIIVL 292 (445)
T ss_dssp HHHHHHTTCSEEEE
T ss_pred HHHHHHcCCeEEEe
Confidence 55558999997744
No 198
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=91.48 E-value=0.3 Score=47.64 Aligned_cols=145 Identities=16% Similarity=0.072 Sum_probs=91.5
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecC-CCCCCCCHHHHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGC-PVEGAIPPSKVAYVA 309 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~-p~~~r~d~e~l~~~a 309 (452)
+|+-.....-+|.+-+....+-++ ..+++.++.++++|+.|. +|. -.+.......+.++.
T Consensus 56 ~DlLe~ag~yID~lKfg~GTs~l~-------------~~l~ekI~l~~~~gV~v~------~GGTlfE~~l~qg~~~~yl 116 (276)
T 1u83_A 56 KDAIAGASDYIDFVKFGWGTSLLT-------------KDLEEKISTLKEHDITFF------FGGTLFEKYVSQKKVNEFH 116 (276)
T ss_dssp HHHHHHHGGGCCEEEECTTGGGGC-------------TTHHHHHHHHHHTTCEEE------ECHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHhhhhcceEEecCcchhhh-------------HHHHHHHHHHHHcCCeEe------CCcHHHHHHHHcCcHHHHH
Confidence 455555667799999988776653 226788999999999875 221 011111112566788
Q ss_pred HHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEE-------EEeCCCcCcHHHHHHHHHHcCCCEE--eecc
Q 012949 310 KELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLA-------VHLHDTYGQSLPNILISLQMGISTV--DCSV 380 (452)
Q Consensus 310 ~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~-------vH~Hnd~GlA~ANaLaAl~aGa~~V--D~Sv 380 (452)
+.+.++|.+.|-|.|..--+.++.-.++|+.+++.+.. ..+ ...=-+...-+..+...++|||+.| ++-=
T Consensus 117 ~~~k~lGF~~IEISdGti~l~~~~~~~lI~~a~~~f~V-l~EvG~K~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEaRE 195 (276)
T 1u83_A 117 RYCTYFGCEYIEISNGTLPMTNKEKAAYIADFSDEFLV-LSEVGSKDAELASRQSSEEWLEYIVEDMEAGAEKVITEARE 195 (276)
T ss_dssp HHHHHTTCSEEEECCSSSCCCHHHHHHHHHHHTTTSEE-EEECSCCC------CCSTHHHHHHHHHHHHTEEEEEEC---
T ss_pred HHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHhhcEE-eeeccccCccccCCCCHHHHHHHHHHHHHCCCcEEEEeeec
Confidence 88899999999999999999999999999988876521 111 1333466777889999999999955 5511
Q ss_pred ---cCCCCCCCCCCCCCcccHHHH
Q 012949 381 ---AGLGGCPYAKGASGNVATEDV 401 (452)
Q Consensus 381 ---~GlGecP~a~graGNaalE~v 401 (452)
.|+=+ ..|+.-.+.+
T Consensus 196 SG~~Gi~~------~~g~~r~d~v 213 (276)
T 1u83_A 196 SGTGGICS------SSGDVRFQIV 213 (276)
T ss_dssp ---------------------CCH
T ss_pred cCCCCccC------CCCCCcHHHH
Confidence 26655 6677776655
No 199
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=91.47 E-value=11 Score=36.75 Aligned_cols=180 Identities=13% Similarity=0.149 Sum_probs=101.7
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCC--HHHHHHHHHhccCCceeEEe----cchhhhhhhhhhhhhc
Q 012949 144 TVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLAD--ARDVMEAVRDLEGARLPVLT----PNLKVILQRSILFQQC 217 (452)
Q Consensus 144 ~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D--~e~v~~~i~~~~~~~l~~l~----~~~~~~i~r~~~~~~~ 217 (452)
.++.+.-.++++.|.+.|++.|-+.--.. -.+.+.+ ..++++.+.+..+-++++++ .+.+
T Consensus 29 ~iD~~~l~~lv~~li~~Gv~gl~v~GtTG--E~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~------------ 94 (306)
T 1o5k_A 29 ELDLESYERLVRYQLENGVNALIVLGTTG--ESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTE------------ 94 (306)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEESSGGG--TGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHH------------
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCcccc--chhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHH------------
Confidence 47899999999999999999987742111 1133322 22333333322222333332 1111
Q ss_pred cchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCC-
Q 012949 218 HASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPV- 296 (452)
Q Consensus 218 ~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~- 296 (452)
+ ..+-.+.|.++|+|-+.+..+- + ++-|.++.++-++.+ |...++++..|= .|.
T Consensus 95 --~--------ai~la~~A~~~Gadavlv~~P~---y----~~~s~~~l~~~f~~v---a~a~~lPiilYn-----~P~~ 149 (306)
T 1o5k_A 95 --K--------TLKLVKQAEKLGANGVLVVTPY---Y----NKPTQEGLYQHYKYI---SERTDLGIVVYN-----VPGR 149 (306)
T ss_dssp --H--------HHHHHHHHHHHTCSEEEEECCC---S----SCCCHHHHHHHHHHH---HTTCSSCEEEEE-----CHHH
T ss_pred --H--------HHHHHHHHHhcCCCEEEECCCC---C----CCCCHHHHHHHHHHH---HHhCCCCEEEEe-----Cccc
Confidence 1 1224566778999999887652 1 123555555555444 334577775433 232
Q ss_pred -CCCCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEE-EEeCCCcCcHHHHHHHHHHcCCC
Q 012949 297 -EGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLA-VHLHDTYGQSLPNILISLQMGIS 374 (452)
Q Consensus 297 -~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~-vH~Hnd~GlA~ANaLaAl~aGa~ 374 (452)
....+++.+.++++ +. ...+.++|+.|- ..++.++++......++ +. +-..++ ..+.++.+|++
T Consensus 150 tg~~l~~~~~~~La~---~~-pnIvgiKdssgd--~~~~~~~~~~~~~~~~~--f~v~~G~d~------~~l~~l~~G~~ 215 (306)
T 1o5k_A 150 TGVNVLPETAARIAA---DL-KNVVGIXEANPD--IDQIDRTVSLTKQARSD--FMVWSGNDD------RTFYLLCAGGD 215 (306)
T ss_dssp HSCCCCHHHHHHHHH---HC-TTEEEEEECCCC--HHHHHHHHHHHHHHCTT--CEEEESSGG------GHHHHHHHTCC
T ss_pred cCcCCCHHHHHHHHH---hC-CCEEEEeCCCCC--HHHHHHHHHhcCCCCCc--EEEEECcHH------HHHHHHHCCCC
Confidence 22457788887763 22 579999999975 56777777665432223 33 444443 35566788976
Q ss_pred EE
Q 012949 375 TV 376 (452)
Q Consensus 375 ~V 376 (452)
.+
T Consensus 216 G~ 217 (306)
T 1o5k_A 216 GV 217 (306)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 200
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=91.45 E-value=2.1 Score=43.14 Aligned_cols=121 Identities=12% Similarity=0.126 Sum_probs=77.2
Q ss_pred CHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecC---------------CCC-------------------CCCCH-----
Q 012949 262 SIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGC---------------PVE-------------------GAIPP----- 302 (452)
Q Consensus 262 s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~---------------p~~-------------------~r~d~----- 302 (452)
..++.++..+++++.+++.|-++.+-|... |- |-+ ....|
T Consensus 75 ~~d~~i~~~~~l~~~vh~~g~~i~~QL~H~-Gr~~~~~~~~~g~~~~apS~i~~~~~~~~~~~~g~~~~~~~~~p~~mt~ 153 (364)
T 1vyr_A 75 HSPEQIAAWKKITAGVHAEDGRIAVQLWHT-GRISHSSIQPGGQAPVSASALNANTRTSLRDENGNAIRVDTTTPRALEL 153 (364)
T ss_dssp SSHHHHHHHHHHHHHHHHTTCCEEEEEECC-TTSSCGGGSGGGCCCEESSSCCCCSEEEEECTTSCEEEEECCCCEECCG
T ss_pred CCHHHHHHHHHHHHHHHhcCCeEEEEeccC-CcccCcccccCCCccccCCCcccccccccccccccccccCCCCCCcCCH
Confidence 345667778888888999998887667641 10 000 00122
Q ss_pred -------HHHHHHHHHHHHCCcCEEEEc-------------------CCcCCCcH---HHHHHHHHHHHHhCCCccEEE-
Q 012949 303 -------SKVAYVAKELHDMGCFEISLG-------------------DTIGVGTP---GTVVPMLEAVMAVVPVEKLAV- 352 (452)
Q Consensus 303 -------e~l~~~a~~l~~~Gad~I~L~-------------------DT~G~~~P---~~v~~li~~l~~~~p~~~l~v- 352 (452)
+.+.+.|+.+.++|+|.|-|- |-.|.... ..+.++|+++++.++..+|.+
T Consensus 154 ~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vr 233 (364)
T 1vyr_A 154 DEIPGIVNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIR 233 (364)
T ss_dssp GGHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEE
Confidence 466778888899999988882 55554433 347788999999996337877
Q ss_pred ----EeCCC---cCcHHH----HHHHHHHcCCCEEeecccCC
Q 012949 353 ----HLHDT---YGQSLP----NILISLQMGISTVDCSVAGL 383 (452)
Q Consensus 353 ----H~Hnd---~GlA~A----NaLaAl~aGa~~VD~Sv~Gl 383 (452)
..+++ .+..+. -+.+.-++|+++|+.+..+.
T Consensus 234 ls~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~ 275 (364)
T 1vyr_A 234 VSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDL 275 (364)
T ss_dssp ECCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBT
T ss_pred EccccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcc
Confidence 22332 132333 24444579999999986543
No 201
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=91.42 E-value=3.5 Score=38.78 Aligned_cols=207 Identities=14% Similarity=0.075 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEec-chhhhhhhhhhhhhccchhhhhhhh
Q 012949 149 VKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTP-NLKVILQRSILFQQCHASVISSNLW 227 (452)
Q Consensus 149 ~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~-~~~~~i~r~~~~~~~~~~~i~~~~~ 227 (452)
+-.++++.+.+.|++.|++.-..... ...-.+. +.++.+++..++. +++- ..+
T Consensus 31 ~~~~~a~~~~~~Ga~~i~v~d~~~~~-~~~g~~~-~~i~~i~~~~~iP--vi~~ggi~---------------------- 84 (266)
T 2w6r_A 31 LLRDWVVEVEKRGAGEILLTSIDRDG-TKSGYDT-EMIRFVRPLTTLP--IIASGGAG---------------------- 84 (266)
T ss_dssp EHHHHHHHHHHHTCSEEEEEETTTSS-CSSCCCH-HHHHHHGGGCCSC--EEEESCCC----------------------
T ss_pred CHHHHHHHHHHCCCCEEEEEecCccc-CCCcccH-HHHHHHHHhcCCC--EEEECCCC----------------------
Confidence 45789999999999999996432110 0001233 3445555433333 3321 111
Q ss_pred ccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCC--C-cEEEEEEee--ec---CCCCCC
Q 012949 228 VYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLS--I-PVRGYVSCV--VG---CPVEGA 299 (452)
Q Consensus 228 ~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G--~-~V~~~l~~~--~g---~p~~~r 299 (452)
..++++.++++|++.|.+....-+. . ...+.+. +.++..| . .+...+..- -| -...+-
T Consensus 85 -~~~~i~~~~~~Gad~v~lg~~~~~~--~--------~~~~~~~---~~~~~~g~~~~~i~~~~d~~~~~g~~~v~~~g~ 150 (266)
T 2w6r_A 85 -KMEHFLEAFLAGADKALAASVFHFR--E--------IDMRELK---EYLKKHGGSGQAVVVAIDAKRVDGEFMVFTHSG 150 (266)
T ss_dssp -STHHHHHHHHHTCSEEECCCCC----------------CHHHH---HHCC----CCCEEEEEEEEEEETTEEEEEETTT
T ss_pred -CHHHHHHHHHcCCcHhhhhHHHHhC--C--------CCHHHHH---HHHHHcCCCCCEEEEEEEEEecCCCEEEEECCC
Confidence 1237888899999988876543200 0 0112222 3333444 2 222222210 00 000110
Q ss_pred --CCHHHHHHHHHHHHHCCcCEEEEcC--CcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcH-HHHHHHHHHcCCC
Q 012949 300 --IPPSKVAYVAKELHDMGCFEISLGD--TIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQS-LPNILISLQMGIS 374 (452)
Q Consensus 300 --~d~e~l~~~a~~l~~~Gad~I~L~D--T~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA-~ANaLaAl~aGa~ 374 (452)
.+.....++++.+.++|++.|.+.+ ..|...... .++++.+++..+ +|+-.= -|.. ..+...++++||+
T Consensus 151 ~~~~~~~~~e~~~~~~~~G~~~i~~t~~~~~g~~~g~~-~~~i~~l~~~~~-ipvia~----GGI~~~ed~~~~~~~Gad 224 (266)
T 2w6r_A 151 KKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTKSGYD-TEMIRFVRPLTT-LPIIAS----GGAGKMEHFLEAFLAGAD 224 (266)
T ss_dssp TEEEEEEHHHHHHHHHHTTCSEEEEEETTTTTTCSCCC-HHHHHHHGGGCC-SCEEEE----SCCCSHHHHHHHHHHTCS
T ss_pred ceecchhHHHHHHHHHHcCCCEEEEEeecCCCCcCCCC-HHHHHHHHHHcC-CCEEEe----CCCCCHHHHHHHHHcCCH
Confidence 0001234566777889999999955 334332211 456777777553 244332 4555 3677777788988
Q ss_pred EEeecccCCCCCCCCCCCCCcccHHHHHHHHHcCCC
Q 012949 375 TVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGV 410 (452)
Q Consensus 375 ~VD~Sv~GlGecP~a~graGNaalE~vv~~L~~~Gi 410 (452)
.|=+.=.=+ .+....+++...|...|+
T Consensus 225 gv~vgsal~---------~~~~~~~~~~~~l~~~g~ 251 (266)
T 2w6r_A 225 AALAASVFH---------FREIDMRELKEYLKKHGV 251 (266)
T ss_dssp EEEESTTTC---------------------------
T ss_pred HHHccHHHH---------cCCCCHHHHHHHHHHCCC
Confidence 654332211 123367777777777665
No 202
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=91.24 E-value=2.8 Score=41.41 Aligned_cols=132 Identities=15% Similarity=0.152 Sum_probs=88.8
Q ss_pred HHHHHHcCCCEEEEEe-cCChHHHhhhc-CCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHH
Q 012949 233 FEAAIAAGAKEVAIFA-SASEAFSKSNI-NCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 310 (452)
Q Consensus 233 ie~a~~~Gi~~V~i~~-s~Sd~~~~~~~-~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~ 310 (452)
...+.++|++.|.+.. +++-.+-..-. -.|.++.+..++.+.+.+ ..+|.+.+ |. +--+++.+.+.++
T Consensus 42 A~l~e~aG~dai~vs~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~~---~~pviaD~------d~-Gyg~~~~v~~~v~ 111 (305)
T 3ih1_A 42 ALVARNTGFLALYLSGAAYTASKGLPDLGIVTSTEVAERARDLVRAT---DLPVLVDI------DT-GFGGVLNVARTAV 111 (305)
T ss_dssp HHHHHHTTCSCEEECHHHHHHHHTCCSSSCSCHHHHHHHHHHHHHHH---CCCEEEEC------TT-CSSSHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECcHHHHHhCCCCCCCcCCHHHHHHHHHHHHHhc---CCCEEEEC------CC-CCCCHHHHHHHHH
Confidence 3456678999888864 44432211112 357888888887776654 45654322 22 2235788889999
Q ss_pred HHHHCCcCEEEEcCCcC-----------CCcHHHHHHHHHHHHHhCCCccEEEEeCCC------cCcHHHHHHHHHHcCC
Q 012949 311 ELHDMGCFEISLGDTIG-----------VGTPGTVVPMLEAVMAVVPVEKLAVHLHDT------YGQSLPNILISLQMGI 373 (452)
Q Consensus 311 ~l~~~Gad~I~L~DT~G-----------~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd------~GlA~ANaLaAl~aGa 373 (452)
.+.++|+..|.|-|..+ +...+++.+.|+++++.-+ ++-+-.-.| .--++.-+.+-.+|||
T Consensus 112 ~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A~~--~~~I~ARtda~~~~g~~~ai~Ra~ay~eAGA 189 (305)
T 3ih1_A 112 EMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEVAP--SLYIVARTDARGVEGLDEAIERANAYVKAGA 189 (305)
T ss_dssp HHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHHCT--TSEEEEEECCHHHHCHHHHHHHHHHHHHHTC
T ss_pred HHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHcCC--CeEEEEeeccccccCHHHHHHHHHHHHHcCC
Confidence 99999999999999874 3455678888888888733 344443333 3357888888899999
Q ss_pred CEE
Q 012949 374 STV 376 (452)
Q Consensus 374 ~~V 376 (452)
+.|
T Consensus 190 D~i 192 (305)
T 3ih1_A 190 DAI 192 (305)
T ss_dssp SEE
T ss_pred CEE
Confidence 966
No 203
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=91.22 E-value=2 Score=38.89 Aligned_cols=155 Identities=14% Similarity=0.105 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHH---HHhcc-CCceeEEecchhhhhhhhhhhhhccchhhhh
Q 012949 149 VKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEA---VRDLE-GARLPVLTPNLKVILQRSILFQQCHASVISS 224 (452)
Q Consensus 149 ~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~---i~~~~-~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~ 224 (452)
+-.+.++.+.+.|++.|++..+.. +.++..+. ++++. .....+++.
T Consensus 27 ~~~~~~~~~~~~G~~~i~l~~~~~--------~~~~~~~~~~~l~~~~~~~~v~v~v~---------------------- 76 (215)
T 1xi3_A 27 PEVESVREALEGGATAIQMRIKNA--------PTREMYEIGKTLRQLTREYDALFFVD---------------------- 76 (215)
T ss_dssp CHHHHHHHHHHTTCSEEEECCCSC--------CHHHHHHHHHHHHHHHHHTTCEEEEE----------------------
T ss_pred hHHHHHHHHHHCCCCEEEECCCCC--------CHHHHHHHHHHHHHHHHHcCCeEEEc----------------------
Confidence 446788899999999999985321 22223333 33211 112222221
Q ss_pred hhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHH
Q 012949 225 NLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSK 304 (452)
Q Consensus 225 ~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~ 304 (452)
+.++.+.++|++.|++....-+ .+.+ +..+ .++.+. ++. .+++.
T Consensus 77 ------~~~~~a~~~gad~v~l~~~~~~--------------~~~~----~~~~-~~~~~~--v~~---------~t~~e 120 (215)
T 1xi3_A 77 ------DRVDVALAVDADGVQLGPEDMP--------------IEVA----KEIA-PNLIIG--ASV---------YSLEE 120 (215)
T ss_dssp ------SCHHHHHHHTCSEEEECTTSCC--------------HHHH----HHHC-TTSEEE--EEE---------SSHHH
T ss_pred ------ChHHHHHHcCCCEEEECCccCC--------------HHHH----HHhC-CCCEEE--Eec---------CCHHH
Confidence 2678899999999976422111 1111 1122 344332 211 13444
Q ss_pred HHHHHHHHHHCCcCEEEE---cCCcCC--CcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEeec
Q 012949 305 VAYVAKELHDMGCFEISL---GDTIGV--GTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCS 379 (452)
Q Consensus 305 l~~~a~~l~~~Gad~I~L---~DT~G~--~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~S 379 (452)
+ ..+.+.|+|.|.+ -+|.+. ..|.. .+.++.+++..+ .++.. .-|....|...++++|++.|.++
T Consensus 121 ~----~~~~~~g~d~i~~~~~~~~~~~~~~~~~~-~~~l~~l~~~~~-~pvia----~GGI~~~nv~~~~~~Ga~gv~vg 190 (215)
T 1xi3_A 121 A----LEAEKKGADYLGAGSVFPTKTKEDARVIG-LEGLRKIVESVK-IPVVA----IGGINKDNAREVLKTGVDGIAVI 190 (215)
T ss_dssp H----HHHHHHTCSEEEEECSSCC----CCCCCH-HHHHHHHHHHCS-SCEEE----ESSCCTTTHHHHHTTTCSEEEES
T ss_pred H----HHHHhcCCCEEEEcCCccCCCCCCCCCcC-HHHHHHHHHhCC-CCEEE----ECCcCHHHHHHHHHcCCCEEEEh
Confidence 3 2345679998886 233210 11222 344566666542 34444 34666678888889999988765
No 204
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=91.08 E-value=0.93 Score=44.53 Aligned_cols=82 Identities=21% Similarity=0.260 Sum_probs=70.7
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCcCC---CcHHHHHHHHHHHHHhCC-CccEEEEe-CCCcCcHHHHHHHHHHcC
Q 012949 298 GAIPPSKVAYVAKELHDMGCFEISLGDTIGV---GTPGTVVPMLEAVMAVVP-VEKLAVHL-HDTYGQSLPNILISLQMG 372 (452)
Q Consensus 298 ~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~li~~l~~~~p-~~~l~vH~-Hnd~GlA~ANaLaAl~aG 372 (452)
+..|.+-+.++++.+.+.|++.|.++-|+|= ++.++-.++++.+++... .++|-+|. +++..-++..+..|-++|
T Consensus 31 g~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~G 110 (304)
T 3l21_A 31 GSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEG 110 (304)
T ss_dssp SCBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcC
Confidence 5789999999999999999999999999995 678888899998888764 45777776 788889999999999999
Q ss_pred CCEEeec
Q 012949 373 ISTVDCS 379 (452)
Q Consensus 373 a~~VD~S 379 (452)
|+.|=..
T Consensus 111 adavlv~ 117 (304)
T 3l21_A 111 AHGLLVV 117 (304)
T ss_dssp CSEEEEE
T ss_pred CCEEEEC
Confidence 9977664
No 205
>3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043}
Probab=91.06 E-value=3.2 Score=40.33 Aligned_cols=219 Identities=13% Similarity=0.076 Sum_probs=104.7
Q ss_pred HHHHHHHHHC-CCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEecchhhhhhhhh--hhhhccchhhhhhhh
Q 012949 151 VELIRRLVSS-GLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSI--LFQQCHASVISSNLW 227 (452)
Q Consensus 151 ~~i~~~L~~~-Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~~~~~~i~r~~--~~~~~~~~~i~~~~~ 227 (452)
.+.++.+.++ |++.||+.++-.. -.+.+++.+.+++ .++++.++.++.-. .+.. .+.....++-+....
T Consensus 36 ~e~l~~aa~~~G~~~VEl~~~~~~-----~~~~~~l~~~l~~-~Gl~i~~~~~~~~~--~~~~~g~l~~~d~~~r~~~i~ 107 (333)
T 3ktc_A 36 IDQINAAKEVGELSYVDLPYPFTP-----GVTLSEVKDALKD-AGLKAIGITPEIYL--QKWSRGAFTNPDPAARAAAFE 107 (333)
T ss_dssp HHHHHHHHHHSSEEEEEEEESCST-----TCCHHHHHHHHHH-HTCEEEEEEECTTS--GGGTTCSTTCSSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCEEEecCCCcc-----hhHHHHHHHHHHH-cCCeEEEEecCcCc--ccccCCCCCCcCHHHHHHHHH
Confidence 3455566777 9999999754211 1356666666654 36777666654210 0000 011111111111111
Q ss_pred ccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCC--CCCCHHHH
Q 012949 228 VYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVE--GAIPPSKV 305 (452)
Q Consensus 228 ~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~--~r~d~e~l 305 (452)
..++.++.|.+.|++.|.+..+.... ......+.++.++++.+.++.+-+..-.+...|.+.-..+.. .-.+.+.+
T Consensus 108 ~~~~~i~~A~~LGa~~vv~~~g~~g~--~~~~~~~~~~~~~~~~~~l~~l~~~a~~~~i~lE~~p~~~~~~~~~~~~~~~ 185 (333)
T 3ktc_A 108 LMHESAGIVRELGANYVKVWPGQDGW--DYPFQVSHKNLWKLAVDGMRDLAGANPDVKFAIEYKPREPRVKMTWDSAART 185 (333)
T ss_dssp HHHHHHHHHHHHTCSEEEECCTTCEE--SSTTSSCHHHHHHHHHHHHHHHHHTCTTSEEEEECCSCSSSSEESSCSHHHH
T ss_pred HHHHHHHHHHHhCCCEEEECCCCCCc--CCCCcCCHHHHHHHHHHHHHHHHHHhhcCCEEEEEecCCCCccccCCCHHHH
Confidence 12346788888999999776541100 001123456666665555444333222233334421101111 12356666
Q ss_pred HHHHHHHHHCCcC-EEEEcCCcCC----CcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEeecc
Q 012949 306 AYVAKELHDMGCF-EISLGDTIGV----GTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCSV 380 (452)
Q Consensus 306 ~~~a~~l~~~Gad-~I~L~DT~G~----~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~Sv 380 (452)
..+++.+ +.+ .-..-|+.=. ..|. +.++.++ ..+.-..+|.+|..+ +.+ +-.+
T Consensus 186 ~~ll~~v---~~~~vgl~lD~~H~~~~g~~~~---~~~~~~~--~~~~i~~vH~~D~~~------------~~d--~~~~ 243 (333)
T 3ktc_A 186 LLGIEDI---GLDNVGVLLDFGHALYGGESPA---DSAQLII--DRGRLFGMDVNDNLR------------GWD--DDLV 243 (333)
T ss_dssp HHHHHHH---TCTTEEEEEEHHHHHHTTCCHH---HHHHHHH--HTTCEEEEEBCBCCS------------SSC--CCBC
T ss_pred HHHHHHc---CCcceEEEEecCcHhhhcCCHH---HHHHHHH--hCCCEEEEEeCCCCC------------CCC--CCcC
Confidence 6666554 333 2223365311 1232 2333322 123234899998654 111 0011
Q ss_pred cCCCCCCCCCCCCCc-ccHHHHHHHHHcCCCC
Q 012949 381 AGLGGCPYAKGASGN-VATEDVVYMLSGLGVE 411 (452)
Q Consensus 381 ~GlGecP~a~graGN-aalE~vv~~L~~~Gi~ 411 (452)
+ +.|+ .++..++..|+..|++
T Consensus 244 --~--------G~G~~~d~~~i~~~L~~~gy~ 265 (333)
T 3ktc_A 244 --V--------GTVHMTEIFEFFYVLKINNWQ 265 (333)
T ss_dssp --T--------TSSCHHHHHHHHHHHHHTTCC
T ss_pred --C--------CCCCHHHHHHHHHHHHHcCCC
Confidence 1 2577 6999999999986664
No 206
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=91.02 E-value=0.68 Score=45.88 Aligned_cols=116 Identities=16% Similarity=0.116 Sum_probs=81.0
Q ss_pred HHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHHHHHHCCcC-EEEEc-CCcCCCcHHHHHHHHHHHHHhCCC
Q 012949 270 YRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCF-EISLG-DTIGVGTPGTVVPMLEAVMAVVPV 347 (452)
Q Consensus 270 ~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad-~I~L~-DT~G~~~P~~v~~li~~l~~~~p~ 347 (452)
++++.+.|++.|+-|-+ |. -.+.+.+..+++.+.+.+.. +|.+. .+..++...-+..+++.+.+.++.
T Consensus 5 ~~~ll~~A~~~~yAV~A-----fN-----v~n~e~~~avi~AAee~~sPvIlq~s~g~~~y~g~~~~~~~v~~aa~~~~~ 74 (307)
T 3n9r_A 5 GNEILLKAHKEGYGVGA-----FN-----FVNFEMLNAIFEAGNEENSPLFIQASEGAIKYMGIDMAVGMVKIMCERYPH 74 (307)
T ss_dssp HHHHHHHHHHHTCCEEE-----EE-----CSSHHHHHHHHHHHHHHTCCEEEEEEHHHHHHHCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHcCceEEE-----Ee-----eCCHHHHHHHHHHHHHhCCCEEEEcChhhhhhCCHHHHHHHHHHHHHhcCC
Confidence 45677899999987752 31 23578888899988888876 44443 223334445667778777776555
Q ss_pred ccEEEEeCCCcCcHHHHHHHHHHcCCC--EEeecccCCCCCCCCCCCCCc-ccHHHHHHHHH
Q 012949 348 EKLAVHLHDTYGQSLPNILISLQMGIS--TVDCSVAGLGGCPYAKGASGN-VATEDVVYMLS 406 (452)
Q Consensus 348 ~~l~vH~Hnd~GlA~ANaLaAl~aGa~--~VD~Sv~GlGecP~a~graGN-aalE~vv~~L~ 406 (452)
+|+.+|. |.|........|+++|.+ ++|+|-..+-+ | .-|.+++.+.+
T Consensus 75 VPValHL--DHg~~~e~~~~ai~~GFtSVMiDgS~~p~ee---------Ni~~Tk~vv~~ah 125 (307)
T 3n9r_A 75 IPVALHL--DHGTTFESCEKAVKAGFTSVMIDASHHAFEE---------NLELTSKVVKMAH 125 (307)
T ss_dssp SCEEEEE--EEECSHHHHHHHHHHTCSEEEECCTTSCHHH---------HHHHHHHHHHHHH
T ss_pred CcEEEEC--CCCCCHHHHHHHHHhCCCcEEEECCCCCHHH---------HHHHHHHHHHHHH
Confidence 6777765 445567899999999998 78999887666 4 44556666666
No 207
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=90.97 E-value=3.3 Score=41.66 Aligned_cols=182 Identities=16% Similarity=0.144 Sum_probs=109.9
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEecCC---CCCcccccCCHHHHHHHHHhc-cCCceeEEecchhhhhhhhhhhhhccchh
Q 012949 146 PTGVKVELIRRLVSSGLPVVEATSFV---SPKWVPQLADARDVMEAVRDL-EGARLPVLTPNLKVILQRSILFQQCHASV 221 (452)
Q Consensus 146 ~~~~k~~i~~~L~~~Gv~~IEvG~~~---s~~~~p~~~D~e~v~~~i~~~-~~~~l~~l~~~~~~~i~r~~~~~~~~~~~ 221 (452)
+.+..+++++.+.++|.+.+-++.+- +|..+-.+ . ++-++.+++. ....+++++--..
T Consensus 118 s~e~a~~~a~~~k~aGa~~vr~q~fKprTs~~~f~gl-g-~egl~~l~~~~~e~Gl~~~te~~d---------------- 179 (350)
T 1vr6_A 118 GREMLMETAHFLSELGVKVLRGGAYKPRTSPYSFQGL-G-EKGLEYLREAADKYGMYVVTEALG---------------- 179 (350)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECBSCCCCCSTTSCCCC-T-HHHHHHHHHHHHHHTCEEEEECSS----------------
T ss_pred CHHHHHHHHHHHHHcCCCeeeeeEEeCCCChHhhcCC-C-HHHHHHHHHHHHHcCCcEEEEeCC----------------
Confidence 78999999999999999998888653 33111111 1 2334444432 2233444442111
Q ss_pred hhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCC-C
Q 012949 222 ISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGA-I 300 (452)
Q Consensus 222 i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r-~ 300 (452)
...++.+.+. ++.+.|....-. .. .+++++-+.|.+|- |+. +. .
T Consensus 180 --------~~~~~~l~~~-vd~lkIgAr~~~-------------n~----~LL~~va~~~kPVi--lk~-------G~~~ 224 (350)
T 1vr6_A 180 --------EDDLPKVAEY-ADIIQIGARNAQ-------------NF----RLLSKAGSYNKPVL--LKR-------GFMN 224 (350)
T ss_dssp --------GGGHHHHHHH-CSEEEECGGGTT-------------CH----HHHHHHHTTCSCEE--EEC-------CTTC
T ss_pred --------HHHHHHHHHh-CCEEEECccccc-------------CH----HHHHHHHccCCcEE--EcC-------CCCC
Confidence 1367777777 898887653211 01 23344446788886 332 33 3
Q ss_pred CHHHHHHHHHHHHHCCcCEEEEcC--CcCC--CcHHHHHH-HHHHHHHhCCCccEEE---EeCCCcCcHHHHHHHHHHcC
Q 012949 301 PPSKVAYVAKELHDMGCFEISLGD--TIGV--GTPGTVVP-MLEAVMAVVPVEKLAV---HLHDTYGQSLPNILISLQMG 372 (452)
Q Consensus 301 d~e~l~~~a~~l~~~Gad~I~L~D--T~G~--~~P~~v~~-li~~l~~~~p~~~l~v---H~Hnd~GlA~ANaLaAl~aG 372 (452)
+++.+...++.+...|.+.|.||. +..+ .+++.+.- .+..+++.+. .+|.+ |.=...-+...-+++|+.+|
T Consensus 225 tl~ei~~Ave~i~~~GN~~viLceRG~~typ~~~~~~vdl~ai~~lk~~~~-lpVi~dssHs~G~~~~v~~~a~AAvA~G 303 (350)
T 1vr6_A 225 TIEEFLLSAEYIANSGNTKIILCERGIRTFEKATRNTLDISAVPIIRKESH-LPILVDPSHSGGRRDLVIPLSRAAIAVG 303 (350)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBS-SCEEECHHHHHCSGGGHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcChhhhhHHHHHHHHHhhC-CCEEEeCCCCCcccchHHHHHHHHHHhC
Confidence 789999999999999998888874 2222 11222221 2466777653 35655 55344445578889999999
Q ss_pred CC--EEeeccc
Q 012949 373 IS--TVDCSVA 381 (452)
Q Consensus 373 a~--~VD~Sv~ 381 (452)
|+ +|+.=+.
T Consensus 304 A~Gl~IE~H~~ 314 (350)
T 1vr6_A 304 AHGIIVEVHPE 314 (350)
T ss_dssp CSEEEEEBCSC
T ss_pred CCEEEEEecCC
Confidence 99 8887654
No 208
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=90.95 E-value=3.5 Score=40.37 Aligned_cols=197 Identities=16% Similarity=0.104 Sum_probs=113.8
Q ss_pred HHHHHHHCCCCEEEEecC-CC--CCcccc--cCCHHHHHHHHHhcc-CCceeEEecchhhhhhhhhhhhhccchhhhhhh
Q 012949 153 LIRRLVSSGLPVVEATSF-VS--PKWVPQ--LADARDVMEAVRDLE-GARLPVLTPNLKVILQRSILFQQCHASVISSNL 226 (452)
Q Consensus 153 i~~~L~~~Gv~~IEvG~~-~s--~~~~p~--~~D~e~v~~~i~~~~-~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~ 226 (452)
-++.++++||+.|=+|.. .+ ....|. .-+.++++..++.+. .+.+++++.. . .+|+ .+.++.+
T Consensus 33 sA~i~e~aGf~ai~vs~s~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~PviaD~-d------~Gyg-~~~~~~~--- 101 (287)
T 3b8i_A 33 SARIAADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVARLPVIADA-D------HGYG-NALNVMR--- 101 (287)
T ss_dssp HHHHHHHTTCSCEEECHHHHHHHHHSCCSSSCSCHHHHHHHHHHHHTTCSSCEEEEC-T------TCSS-SHHHHHH---
T ss_pred HHHHHHHcCCCEEEeCcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEC-C------CCCC-CHHHHHH---
Confidence 467788899999999854 21 111222 135678888888764 3445544421 1 3455 3333333
Q ss_pred hccHHhHHHHHHcCCCEEEEEecCChH---HHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHH
Q 012949 227 WVYLQGFEAAIAAGAKEVAIFASASEA---FSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPS 303 (452)
Q Consensus 227 ~~~~~~ie~a~~~Gi~~V~i~~s~Sd~---~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e 303 (452)
.+.+..++|+.-|+|-....+- |...+ =.+.++..++++.+++....-++.|.+-- ++.....+
T Consensus 102 -----~v~~l~~aGa~gv~iED~~~pKrcgh~~gk-l~~~~e~~~~I~aa~~a~~~~~~~i~aRt-------daa~~gl~ 168 (287)
T 3b8i_A 102 -----TVVELERAGIAALTIEDTLLPAQFGRKSTD-LICVEEGVGKIRAALEARVDPALTIIART-------NAELIDVD 168 (287)
T ss_dssp -----HHHHHHHHTCSEEEEECBCCSCCTTTCTTC-BCCHHHHHHHHHHHHHHCCSTTSEEEEEE-------ETTTSCHH
T ss_pred -----HHHHHHHhCCeEEEEcCCCCccccCCCCCC-ccCHHHHHHHHHHHHHcCCCCCcEEEEec-------hhhhcCHH
Confidence 6677778999999999876421 11222 24677778777555554443445554321 11122457
Q ss_pred HHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEeecccCC
Q 012949 304 KVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCSVAGL 383 (452)
Q Consensus 304 ~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~Sv~Gl 383 (452)
...+=++.+.++|||.|.+. |+-+++.+.++.+ .++. |+-+--....++ -+.-.--++|+++|-.....+
T Consensus 169 ~ai~Ra~ay~eAGAd~i~~e---~~~~~~~~~~i~~----~~~~-P~ii~~~g~~~~--~~~~eL~~lGv~~v~~~~~~~ 238 (287)
T 3b8i_A 169 AVIQRTLAYQEAGADGICLV---GVRDFAHLEAIAE----HLHI-PLMLVTYGNPQL--RDDARLARLGVRVVVNGHAAY 238 (287)
T ss_dssp HHHHHHHHHHHTTCSEEEEE---CCCSHHHHHHHHT----TCCS-CEEEECTTCGGG--CCHHHHHHTTEEEEECCCHHH
T ss_pred HHHHHHHHHHHcCCCEEEec---CCCCHHHHHHHHH----hCCC-CEEEeCCCCCCC--CCHHHHHHcCCcEEEEChHHH
Confidence 78888899999999999996 3444565555544 4432 333322222221 223344578988887665544
No 209
>2bmb_A Folic acid synthesis protein FOL1; folate biosynthesis, transferase, ligase, multifunctional enzyme; HET: PMM; 2.3A {Saccharomyces cerevisiae}
Probab=90.87 E-value=16 Score=38.92 Aligned_cols=168 Identities=12% Similarity=0.120 Sum_probs=95.8
Q ss_pred CccEEEeCCc---cccCCCCCCCC-CHHHHHHHHHHHHHCC-----CCEEEEecCC-CCCcccccCCHHHHHHHH----H
Q 012949 125 RFVKIVEVGP---RDGLQNEKNTV-PTGVKVELIRRLVSSG-----LPVVEATSFV-SPKWVPQLADARDVMEAV----R 190 (452)
Q Consensus 125 ~~V~I~D~TL---RDG~Q~~~~~~-~~~~k~~i~~~L~~~G-----v~~IEvG~~~-s~~~~p~~~D~e~v~~~i----~ 190 (452)
.-.-|+.+|+ =||++ .+ +.+..++.++.+.+.| .+.|++|.-+ .|. .+.+ +.++.++++ +
T Consensus 226 ~iMGIlNvTPDSFsDGG~----~~~~~~~al~~a~~mv~~G~~~~~AdIIDIGgeSTRPG-a~~v-s~eEEl~RvvpvI~ 299 (545)
T 2bmb_A 226 YIMAIFNATPDSFSDGGE----HFADIESQLNDIIKLCKDALYLHESVIIDVGGCSTRPN-SIQA-SEEEEIRRSIPLIK 299 (545)
T ss_dssp EEEEEEECSCSSTTTTTT----TTTCHHHHHHHHHHHHHHHHTTCSCEEEEEECSCCSTT-CCCC-CHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCCcCCCc----CcCCHHHHHHHHHHHHHcCCCCCCceEEEECCCCCCCC-CCCC-CHHHHHHHHHHHHH
Confidence 3345777777 45654 35 8899999999999999 9999999643 232 1222 333333333 2
Q ss_pred hccC------CceeEEecchhhhhhhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCC-hHHHhhhcCCCH
Q 012949 191 DLEG------ARLPVLTPNLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASAS-EAFSKSNINCSI 263 (452)
Q Consensus 191 ~~~~------~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~S-d~~~~~~~~~s~ 263 (452)
.+.. ..+..-+...+ .+-+++|+++|++.|.=..... |
T Consensus 300 ~i~~~~~~~~~~vpISIDT~~------------------------a~VaeaAl~aGadIINDVsg~~~d----------- 344 (545)
T 2bmb_A 300 AIRESTELPQDKVILSIDTYR------------------------SNVAKEAIKVGVDIINDISGGLFD----------- 344 (545)
T ss_dssp HHHHCSSSCGGGEEEEEECCC------------------------HHHHHHHHHTTCCEEEETTTTSSC-----------
T ss_pred HHHhhccccCCCCeEEEeCCc------------------------HHHHHHHHHcCCCEEEeCCCCcCC-----------
Confidence 2211 12222222111 2467889999999886332211 1
Q ss_pred HHHHHHHHHHHHHHHhC-CCcEEEEEEeeecCCCC--CC--CC-----------------------------H-----HH
Q 012949 264 EDSLVRYRAVAHAAKVL-SIPVRGYVSCVVGCPVE--GA--IP-----------------------------P-----SK 304 (452)
Q Consensus 264 e~~l~~~~~~v~~Ak~~-G~~V~~~l~~~~g~p~~--~r--~d-----------------------------~-----e~ 304 (452)
.++++.+++. |..+. +++.-|.|.. .+ ++ . ++
T Consensus 345 -------~~m~~vva~~~~~~vV--lmH~rG~p~tm~~~~~y~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vv~~v~~~ 415 (545)
T 2bmb_A 345 -------SNMFAVIAENPEICYI--LSHTRGDISTMNRLAHYENFALGDSIQQEFVHNTDIQQLDDLKDKTVLIRNVGQE 415 (545)
T ss_dssp -------TTHHHHHHTCTTSEEE--EECCCSCTTTGGGCCCCSSCTTTTTEEEEEETTEEGGGSTTHHHHCHHHHHHHHH
T ss_pred -------hHHHHHHHHhCCCeEE--EECCCCCCCCccccccccccccccccchhccccccccccccccccchHHHHHHHH
Confidence 1345667788 87765 6655444431 01 11 1 34
Q ss_pred HHHHHHHHHHCCcC--EEEEcCC-cCCC-cHHHHHHHHHHHHH
Q 012949 305 VAYVAKELHDMGCF--EISLGDT-IGVG-TPGTVVPMLEAVMA 343 (452)
Q Consensus 305 l~~~a~~l~~~Gad--~I~L~DT-~G~~-~P~~v~~li~~l~~ 343 (452)
+.+.++.+.++|++ .|.| |- +|.. ++++-.++++.+..
T Consensus 416 l~~~i~~a~~~GI~~~~Iil-DPGiGF~Kt~~~nl~lL~~l~~ 457 (545)
T 2bmb_A 416 IGERYIKAIDNGVKRWQILI-DPGLGFAKTWKQNLQIIRHIPI 457 (545)
T ss_dssp HHHHHHHHHHTTCCGGGEEE-ECCTTSSCCHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHcCCCHHHEEE-eCCCCcccChHHHHHHHHHHHH
Confidence 45567778899986 5666 53 3332 35666667666654
No 210
>3lgd_A Adenosine deaminase CECR1; TIM barrel, dimerization and receptor binding domains, glyco hydrolase, growth factor, secreted; HET: NAG; 2.00A {Homo sapiens} PDB: 3lgg_A*
Probab=90.70 E-value=1.7 Score=46.02 Aligned_cols=143 Identities=15% Similarity=0.000 Sum_probs=88.2
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHh-CC--CcEEEEEEeeecCCCCCCCCHHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKV-LS--IPVRGYVSCVVGCPVEGAIPPSKVAY 307 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~-~G--~~V~~~l~~~~g~p~~~r~d~e~l~~ 307 (452)
+-++.+.+-|+..+-+....++.+....-+.+.++.++.+.+.++.+++ .| +.++.-++.. -..+++...+
T Consensus 204 e~l~d~a~dgV~Y~ElR~~f~p~~~~~g~~l~~~~vv~~v~~~~~~~~~~~~~fI~~rlI~~~~------R~~~~e~a~e 277 (508)
T 3lgd_A 204 RSMQEFYEDNVLYMEIRARLLPVYELSGEHHDEEWSVKTYQEVAQKFVETHPEFIGIKIIYSDH------RSKDVAVIAE 277 (508)
T ss_dssp HHHHHHHHTTEEEEEEEECCCCCBCTTSCBCCHHHHHHHHHHHHHHHHHHCTTCCEEEEEEEEE------TTSCHHHHHH
T ss_pred HHHHHHHHcCceEEEEeecCchHhhccCCCCCHHHHHHHHHHHHHHHHHhcCCceEEEEEEEec------CCCCHHHHHH
Confidence 4667777889988877643333332223357899999999999888775 44 5565433321 1235666555
Q ss_pred HHHHHHHC------CcCEEEEcCC--cCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcH---HHHHHHHHHcCCCEE
Q 012949 308 VAKELHDM------GCFEISLGDT--IGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQS---LPNILISLQMGISTV 376 (452)
Q Consensus 308 ~a~~l~~~------Gad~I~L~DT--~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA---~ANaLaAl~aGa~~V 376 (452)
.++.+.++ ++-.|-|+.. .|. .|....+.+...+++-.+.++.+|+-.+.+.+ ..|...|+..|+++|
T Consensus 278 ~l~~a~~~~~~~~~~VvG~DLaG~E~~g~-p~~~f~~~f~~~~A~~~gl~~t~HAGE~~~~g~~~~~~i~~Al~Lga~RI 356 (508)
T 3lgd_A 278 SIRMAMGLRIKFPTVVAGFDLVGHEDTGH-SLHDYKEALMIPAKDGVKLPYFFHAGETDWQGTSIDRNILDALMLNTTRI 356 (508)
T ss_dssp HHHHHHHHHHHCTTTEEEEEEESCTTTSC-CTGGGHHHHTHHHHTTCCCCBCCEECCSSCCSSTTTTHHHHHHHTTCSSE
T ss_pred HHHHHHHHHhhCCCceEEeccCCCCCCCC-CHHHHHHHHHHHHHHHcCCceeeecccccCCCCCcHHHHHHHHhcCCcee
Confidence 55554443 3445555432 232 35566666665433335668899998876544 458888888999987
Q ss_pred eecc
Q 012949 377 DCSV 380 (452)
Q Consensus 377 D~Sv 380 (452)
+=.+
T Consensus 357 gHGv 360 (508)
T 3lgd_A 357 GHGF 360 (508)
T ss_dssp EECT
T ss_pred eeeE
Confidence 5433
No 211
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=90.68 E-value=16 Score=37.21 Aligned_cols=149 Identities=13% Similarity=0.057 Sum_probs=80.5
Q ss_pred hHHHHHHcCCCEEEEEecCChHHHhh-hc--CCCHHHHHHHHHHHHHHHHhCCCcEEEEEEee--ecCCCC------CC-
Q 012949 232 GFEAAIAAGAKEVAIFASASEAFSKS-NI--NCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCV--VGCPVE------GA- 299 (452)
Q Consensus 232 ~ie~a~~~Gi~~V~i~~s~Sd~~~~~-~~--~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~--~g~p~~------~r- 299 (452)
.++.++++|+..||+-+-+.+..... .. +. ..++.+..+++.||++|++|...+-+. +..|-. -.
T Consensus 53 ~~~ilk~~G~N~VRlrvwv~p~~~~g~~y~~g~---~d~~~~~~~a~~Ak~~GLkVlldfHysD~WadPg~Q~~P~aW~~ 129 (399)
T 1ur4_A 53 IFKTLKEAGVNYVRVRIWNDPYDANGNGYGGGN---NDLEKAIQIGKRATANGMKLLADFHYSDFWADPAKQKAPKAWAN 129 (399)
T ss_dssp HHHHHHHTTCCEEEEEECSCCBCTTCCBCSTTC---CCHHHHHHHHHHHHHTTCEEEEEECSSSSCCSSSCCCCCGGGTT
T ss_pred HHHHHHHCCCCEEEEeeecCCcccccCccCCCC---CCHHHHHHHHHHHHHCCCEEEEEeccCCccCCcccccCcccccc
Confidence 67778899999999855433210000 00 11 125667788899999999997554321 001100 00
Q ss_pred CCHH--------HHHHHHHHHHHCCc--CEEEEcC-C-cCC---CcHHHHHHH----HHHHHHhCCCccEEEEeCCCcCc
Q 012949 300 IPPS--------KVAYVAKELHDMGC--FEISLGD-T-IGV---GTPGTVVPM----LEAVMAVVPVEKLAVHLHDTYGQ 360 (452)
Q Consensus 300 ~d~e--------~l~~~a~~l~~~Ga--d~I~L~D-T-~G~---~~P~~v~~l----i~~l~~~~p~~~l~vH~Hnd~Gl 360 (452)
.+.+ +...+++.+.+.|+ +.|.+.. + .|. ....++.++ ++++|+..|..+|-+|..+-...
T Consensus 130 ~~~~~l~~~~~~yt~~~l~~l~~~g~~~~~vqvGNEi~~g~~~~~~~~~la~ll~ag~~aVR~v~p~~~V~ih~~~~~~~ 209 (399)
T 1ur4_A 130 LNFEDKKTALYQYTKQSLKAMKAAGIDIGMVQVGNETNGGLAGETDWAKMSQLFNAGSQAVRETDSNILVALHFTNPETS 209 (399)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEESSSCSSCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEEECCTTST
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEccccccccCCcccHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCCcch
Confidence 1222 23345667777774 4564543 1 122 234554444 57788888988888988765443
Q ss_pred HHHH-HHHHHH-cC--CCEEeecccCC
Q 012949 361 SLPN-ILISLQ-MG--ISTVDCSVAGL 383 (452)
Q Consensus 361 A~AN-aLaAl~-aG--a~~VD~Sv~Gl 383 (452)
+.-. -+.++. .| .|+|-.+..+.
T Consensus 210 ~~~~~~~d~l~~~g~d~DvIG~syYp~ 236 (399)
T 1ur4_A 210 GRYAWIAETLHRHHVDYDVFASSYYPF 236 (399)
T ss_dssp THHHHHHHHHHHTTCCCSEEEEEECTT
T ss_pred HHHHHHHHHHHHcCCCcCeEeEecCcc
Confidence 3211 113322 34 56776666643
No 212
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=90.68 E-value=4.6 Score=39.77 Aligned_cols=110 Identities=15% Similarity=0.091 Sum_probs=68.1
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 310 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~ 310 (452)
+.++.+.++|++.|.+.... + .+.++.+|+.|+++...+ .++ +.++
T Consensus 79 ~~~~~a~~~g~d~V~~~~g~-p------------------~~~i~~l~~~g~~v~~~v-----------~~~----~~a~ 124 (332)
T 2z6i_A 79 DIVDLVIEEGVKVVTTGAGN-P------------------SKYMERFHEAGIIVIPVV-----------PSV----ALAK 124 (332)
T ss_dssp HHHHHHHHTTCSEEEECSSC-G------------------GGTHHHHHHTTCEEEEEE-----------SSH----HHHH
T ss_pred HHHHHHHHCCCCEEEECCCC-h------------------HHHHHHHHHcCCeEEEEe-----------CCH----HHHH
Confidence 36788999999999876532 1 124456667788775322 123 3456
Q ss_pred HHHHCCcCEEEEcC--CcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcH-HHHHHHHHHcCCCEEeec
Q 012949 311 ELHDMGCFEISLGD--TIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQS-LPNILISLQMGISTVDCS 379 (452)
Q Consensus 311 ~l~~~Gad~I~L~D--T~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA-~ANaLaAl~aGa~~VD~S 379 (452)
.+.++|+|.|.+-. +-|...+....++++.+++.+. +||-.= -|.. ..|+.+++.+||+.|...
T Consensus 125 ~~~~~GaD~i~v~g~~~GG~~g~~~~~~ll~~i~~~~~-iPViaa----GGI~~~~~~~~al~~GAdgV~vG 191 (332)
T 2z6i_A 125 RMEKIGADAVIAEGMEAGGHIGKLTTMTLVRQVATAIS-IPVIAA----GGIADGEGAAAGFMLGAEAVQVG 191 (332)
T ss_dssp HHHHTTCSCEEEECTTSSEECCSSCHHHHHHHHHHHCS-SCEEEE----SSCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHcCCCEEEEECCCCCCCCCCccHHHHHHHHHHhcC-CCEEEE----CCCCCHHHHHHHHHcCCCEEEec
Confidence 67789999998832 1222111123367788877664 344432 3454 468888889999987754
No 213
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=90.54 E-value=0.94 Score=47.22 Aligned_cols=73 Identities=16% Similarity=0.136 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEeecccC
Q 012949 304 KVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCSVAG 382 (452)
Q Consensus 304 ~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~Sv~G 382 (452)
...+.++.+.++|++.|.+.=+.| .|....+.++.+++.+|+.++.+- .++...-+..+.++||+.|.++..|
T Consensus 237 ~~~~~a~~l~~aGvd~v~i~~~~G--~~~~~~e~i~~i~~~~p~~pvi~g----~~~t~e~a~~l~~~G~d~I~v~~~~ 309 (494)
T 1vrd_A 237 ETMERVEKLVKAGVDVIVIDTAHG--HSRRVIETLEMIKADYPDLPVVAG----NVATPEGTEALIKAGADAVKVGVGP 309 (494)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCC--SSHHHHHHHHHHHHHCTTSCEEEE----EECSHHHHHHHHHTTCSEEEECSSC
T ss_pred hHHHHHHHHHHhCCCEEEEEecCC--chHHHHHHHHHHHHHCCCceEEeC----CcCCHHHHHHHHHcCCCEEEEcCCC
Confidence 345678889999999999833333 677788999999999987777663 2455666788899999999996543
No 214
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=90.52 E-value=1.2 Score=41.27 Aligned_cols=186 Identities=18% Similarity=0.146 Sum_probs=92.0
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEecchhhhhhhhhhhhhccchhhhh
Q 012949 145 VPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISS 224 (452)
Q Consensus 145 ~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~ 224 (452)
++...-.+.++.+.++|++ ||+... .+ .+....++.+..+...+ .+++..|-.. +.+........+.
T Consensus 7 ~p~~~l~~~l~~~~~~G~~-vEl~~~-~~----~~~~~~~~~~~~~~~~~-~~~~h~~~~~------~~l~~~~~~~r~~ 73 (254)
T 3ayv_A 7 FPLSRAEEALPRLQALGLG-AEVYLD-PA----LLEEDALFQSLRRRFSG-KLSVHLPFWN------LDLLSPDPEVRGL 73 (254)
T ss_dssp EEGGGHHHHHHHHHHHTCE-EEEECC-GG----GTTCHHHHHHHHHHCCS-CEEEECCCTT------CCTTCSSHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCC-EEEecc-cc----ccCcHHHHHHHHHHhCC-CeEEecCccC------CCCCCCCHHHHHH
Confidence 3444556778888999999 999432 11 12222233333333324 5655554221 0000000000000
Q ss_pred hhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHH
Q 012949 225 NLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSK 304 (452)
Q Consensus 225 ~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~ 304 (452)
......+.++.|.+.|++.|.+.................+...+.+.++.++|++.|+.+. +... ...+++.
T Consensus 74 ~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~--lEn~------~~~~~~~ 145 (254)
T 3ayv_A 74 TLRRLLFGLDRAAELGADRAVFHSGIPHGRTPEEALERALPLAEALGLVVRRARTLGVRLL--LENS------HEPHPEA 145 (254)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCCTTCCHHHHHHTHHHHHHHTHHHHHHHHHHTCEEE--EECS------SCSSGGG
T ss_pred HHHHHHHHHHHHHHhCCCEEEECCCCCcccccccHHHHHHHHHHHHHHHHHHHhhcCCEEE--EcCC------CCCCHHH
Confidence 0001234778888999999988654321100000011245566777788889999998654 3321 2236777
Q ss_pred HHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHH-HHHhCCCccEEEEeCCCcC
Q 012949 305 VAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEA-VMAVVPVEKLAVHLHDTYG 359 (452)
Q Consensus 305 l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~-l~~~~p~~~l~vH~Hnd~G 359 (452)
+.++++.+- .--.+++ ||.=...-.. +-+.. +.+ ++. ..+|.||..|
T Consensus 146 ~~~l~~~v~--~~vg~~~-D~~H~~~~g~--~~~~~~~~~-~~~--~~vHl~D~~~ 193 (254)
T 3ayv_A 146 LRPVLEAHA--GELGFCF-DAAHARVFSR--TPDPGPWLA-LAP--EHLHLNDTDG 193 (254)
T ss_dssp THHHHHHHT--TSSEEEE-EHHHHHHHSS--CCSSHHHHT-TCC--SEEEECBCCS
T ss_pred HHHHHHhcC--cCEEEEE-EchhhHHhCC--CchhHHHHH-cCC--CEEEEeCCCC
Confidence 777777653 2224444 6522111100 01222 223 443 7899999875
No 215
>2pgf_A Adenosine deaminase; metallo-dependent hydrolase, structural genomics, medical ST genomics of pathogenic protozoa consortium, MSGPP; HET: MSE ADN; 1.89A {Plasmodium vivax} PDB: 2pgr_A* 2qvn_A* 3ewc_A* 3ewd_A* 2amx_A
Probab=90.46 E-value=6.4 Score=39.42 Aligned_cols=135 Identities=13% Similarity=0.006 Sum_probs=80.7
Q ss_pred HHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHH-hC--CCcEEEEEEeeecCCCCCCCCHHHHH
Q 012949 230 LQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAK-VL--SIPVRGYVSCVVGCPVEGAIPPSKVA 306 (452)
Q Consensus 230 ~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak-~~--G~~V~~~l~~~~g~p~~~r~d~e~l~ 306 (452)
.+.++.+++.|+..+.++.. +.+.-...|.+.++.++.+.+.++.++ +. |+.++.-+++.- . .+++...
T Consensus 118 ~~~l~e~~~~GV~y~E~r~d--p~~~~~~~gl~~~~~~~a~~~~~~~a~~~~~~gi~~~li~~~~r----~--~~~~~~~ 189 (371)
T 2pgf_A 118 KHAVFNKYKEGVVLMEFRYS--PTFVAFKYNLDIELIHQAIVKGIKEVVELLDHKIHVALMCIGDT----G--HEAANIK 189 (371)
T ss_dssp HHHHHHHHHHTEEEEEEEEC--HHHHHTTTTCCHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEE----S--STTCCHH
T ss_pred HHHHHHHHHCCCEEEEEEEC--cccccccCCCCHHHHHHHHHHHHHHHHHHccCCCEEEEEEEecC----C--CCHHHHH
Confidence 35677888899998888763 322122457788899988888777655 46 887654344321 1 2223333
Q ss_pred HHHHHHHH--CCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCc-CcHHHHHHHHHHc-CCCEE
Q 012949 307 YVAKELHD--MGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTY-GQSLPNILISLQM-GISTV 376 (452)
Q Consensus 307 ~~a~~l~~--~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~-GlA~ANaLaAl~a-Ga~~V 376 (452)
+.++.+.+ .++..|-++..-.. |..+.+.++..++. +.++.+|++.+. |-...+...|+.. |++++
T Consensus 190 ~~~~~a~~~~~~vvg~dl~g~e~~--~~~~~~~~~~A~~~--gl~~~~HagE~~~~~~~~~i~~al~~lg~~ri 259 (371)
T 2pgf_A 190 ASADFCLKHKADFVGFDHGGHEVD--LKEYKEIFDYVRES--GVPLSVHAGEDVTLPNLNTLYSAIQVLKVERI 259 (371)
T ss_dssp HHHHHHHHTTTTEEEEEEEESCCC--GGGGHHHHHHHHHT--TCCBEEEESCCTTSSSSHHHHHHHHTSCCSEE
T ss_pred HHHHHHHhCCCCEEEEecCCCccc--HHHHHHHHHHHHHc--CCcEEEeeCCCCCCCchHHHHHHHhccCCCEE
Confidence 33443333 22333333321111 77888888777663 457999999873 3211567788886 99876
No 216
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=90.45 E-value=4.9 Score=39.01 Aligned_cols=181 Identities=17% Similarity=0.116 Sum_probs=108.7
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEecCC---CCCcccccCCHHHHHHHHHhc-cCCceeEEecchhhhhhhhhhhhhccchh
Q 012949 146 PTGVKVELIRRLVSSGLPVVEATSFV---SPKWVPQLADARDVMEAVRDL-EGARLPVLTPNLKVILQRSILFQQCHASV 221 (452)
Q Consensus 146 ~~~~k~~i~~~L~~~Gv~~IEvG~~~---s~~~~p~~~D~e~v~~~i~~~-~~~~l~~l~~~~~~~i~r~~~~~~~~~~~ 221 (452)
+.+.-+++++.+.++|.+.+-++.+- ++..+-.+ . ++-++.+++. ....+++++--..
T Consensus 50 ~~e~a~~~a~~~k~~ga~~~k~~~~kprts~~~f~g~-g-~~gl~~l~~~~~~~Gl~~~te~~d---------------- 111 (276)
T 1vs1_A 50 SWEQVREAALAVKEAGAHMLRGGAFKPRTSPYSFQGL-G-LEGLKLLRRAGDEAGLPVVTEVLD---------------- 111 (276)
T ss_dssp CHHHHHHHHHHHHHHTCSEEECBSSCCCSSTTSCCCC-T-HHHHHHHHHHHHHHTCCEEEECCC----------------
T ss_pred CHHHHHHHHHHHHHhCCCEEEeEEEeCCCChhhhcCC-C-HHHHHHHHHHHHHcCCcEEEecCC----------------
Confidence 78999999999999999998887653 22111111 1 3334444432 2223344431111
Q ss_pred hhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCC-C
Q 012949 222 ISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGA-I 300 (452)
Q Consensus 222 i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r-~ 300 (452)
.+.++.+.+. ++.+.|....-. .. .+++++-+.|.+|. |+. +. .
T Consensus 112 --------~~~~~~l~~~-vd~~kIgs~~~~-------------n~----~ll~~~a~~~kPV~--lk~-------G~~~ 156 (276)
T 1vs1_A 112 --------PRHVETVSRY-ADMLQIGARNMQ-------------NF----PLLREVGRSGKPVL--LKR-------GFGN 156 (276)
T ss_dssp --------GGGHHHHHHH-CSEEEECGGGTT-------------CH----HHHHHHHHHTCCEE--EEC-------CTTC
T ss_pred --------HHHHHHHHHh-CCeEEECccccc-------------CH----HHHHHHHccCCeEE--EcC-------CCCC
Confidence 1367777777 898887643211 01 23344446688886 332 33 3
Q ss_pred CHHHHHHHHHHHHHCCcCEEEEcC-Cc-CC--CcHHHHHHH-HHHHHHhCCCccEE-EEeC--CCcCcHHHHHHHHHHcC
Q 012949 301 PPSKVAYVAKELHDMGCFEISLGD-TI-GV--GTPGTVVPM-LEAVMAVVPVEKLA-VHLH--DTYGQSLPNILISLQMG 372 (452)
Q Consensus 301 d~e~l~~~a~~l~~~Gad~I~L~D-T~-G~--~~P~~v~~l-i~~l~~~~p~~~l~-vH~H--nd~GlA~ANaLaAl~aG 372 (452)
+++.+...++.+...|.+.|.|+. -+ .+ ..++.+.-. +..+++.+.. +|. .=.| ...-+...-+++|+.+|
T Consensus 157 t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~yp~y~~~~vdl~~i~~lk~~~~l-pVi~dssH~~g~~~~~~~~~~aAva~G 235 (276)
T 1vs1_A 157 TVEELLAAAEYILLEGNWQVVLVERGIRTFEPSTRFTLDVAAVAVLKEATHL-PVIVDPSHPAGRRSLVPALAKAGLAAG 235 (276)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCBHHHHHHHHHHBSS-CEEECCHHHHCSGGGHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEeCCcCCCCCcCcchhCHHHHHHHHHHhCC-CEEEeCCCCCCccchHHHHHHHHHHcC
Confidence 789999999999999987777766 11 12 233444333 6777776532 453 3334 33334577788899999
Q ss_pred CC--EEeecc
Q 012949 373 IS--TVDCSV 380 (452)
Q Consensus 373 a~--~VD~Sv 380 (452)
|+ +|+.=+
T Consensus 236 a~Gl~IE~H~ 245 (276)
T 1vs1_A 236 ADGLIVEVHP 245 (276)
T ss_dssp CSEEEEEBCS
T ss_pred CCEEEEEecC
Confidence 99 888765
No 217
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=90.45 E-value=3.3 Score=40.41 Aligned_cols=157 Identities=15% Similarity=0.226 Sum_probs=82.8
Q ss_pred HHHHHHHHHCCCCEEEEecCC------CCCcccccCCHHHHHHHHHhcc-CCceeEEecchhhhhhhhhhhhhccchhhh
Q 012949 151 VELIRRLVSSGLPVVEATSFV------SPKWVPQLADARDVMEAVRDLE-GARLPVLTPNLKVILQRSILFQQCHASVIS 223 (452)
Q Consensus 151 ~~i~~~L~~~Gv~~IEvG~~~------s~~~~p~~~D~e~v~~~i~~~~-~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~ 223 (452)
.--++.++++||+.|-+|... .|.-.| -..++++...+.+. .++.+.++-.+. +.+|...+.+.++
T Consensus 44 a~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~--vTldemi~h~~aV~r~~~~~~vvaD~p-----fgsy~~s~~~a~~ 116 (281)
T 1oy0_A 44 YSTARIFDEAGIPVLLVGDSAANVVYGYDTTVP--ISIDELIPLVRGVVRGAPHALVVADLP-----FGSYEAGPTAALA 116 (281)
T ss_dssp HHHHHHHHTTTCCEEEECTTHHHHTTCCSSSSS--CCGGGTHHHHHHHHHHCTTSEEEEECC-----TTSSTTCHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCC--CCHHHHHHHHHHHHhcCCCCeEEEECC-----CCcccCCHHHHHH
Confidence 345788899999999998421 122111 12345555554432 122222222222 1122222222211
Q ss_pred hhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEee------ec-CCC
Q 012949 224 SNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCV------VG-CPV 296 (452)
Q Consensus 224 ~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~------~g-~p~ 296 (452)
. ..+...++|++-|.+-... + +.+.|+.+.+.|++|.+.|-.+ +| .-.
T Consensus 117 n-------a~rl~~eaGa~aVklEdg~--------------e----~~~~I~al~~agIpV~gHiGLtPqsv~~~ggf~v 171 (281)
T 1oy0_A 117 A-------ATRFLKDGGAHAVKLEGGE--------------R----VAEQIACLTAAGIPVMAHIGFTPQSVNTLGGFRV 171 (281)
T ss_dssp H-------HHHHHHTTCCSEEEEEBSG--------------G----GHHHHHHHHHHTCCEEEEEECCC-----------
T ss_pred H-------HHHHHHHhCCeEEEECCcH--------------H----HHHHHHHHHHCCCCEEeeecCCcceecccCCeEE
Confidence 1 2334445999999998761 1 2345566677899887555432 00 001
Q ss_pred CCCCC-HHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCC
Q 012949 297 EGAIP-PSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPV 347 (452)
Q Consensus 297 ~~r~d-~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~ 347 (452)
-+|++ .+.+.+-++++.++||+.|.+.= .|. ++.+.+.+.++.
T Consensus 172 ~grt~~a~~~i~rA~a~~eAGA~~ivlE~-----vp~---~~a~~it~~l~i 215 (281)
T 1oy0_A 172 QGRGDAAEQTIADAIAVAEAGAFAVVMEM-----VPA---ELATQITGKLTI 215 (281)
T ss_dssp ---CHHHHHHHHHHHHHHHHTCSEEEEES-----CCH---HHHHHHHHHCSS
T ss_pred EeCcHHHHHHHHHHHHHHHcCCcEEEEec-----CCH---HHHHHHHHhCCC
Confidence 12322 35666677888999999999953 353 355666676654
No 218
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=90.40 E-value=2.3 Score=41.38 Aligned_cols=82 Identities=9% Similarity=0.050 Sum_probs=69.9
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCcC---CCcHHHHHHHHHHHHHhCC-CccEEEEe-CCCcCcHHHHHHHHHHcC
Q 012949 298 GAIPPSKVAYVAKELHDMGCFEISLGDTIG---VGTPGTVVPMLEAVMAVVP-VEKLAVHL-HDTYGQSLPNILISLQMG 372 (452)
Q Consensus 298 ~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G---~~~P~~v~~li~~l~~~~p-~~~l~vH~-Hnd~GlA~ANaLaAl~aG 372 (452)
+..|.+.+.++++.+.+.|++.|.++-|+| .++.++-.++++.+++... .++|-+|. +++..-++..+..|-++|
T Consensus 17 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~G 96 (291)
T 3tak_A 17 GGVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLG 96 (291)
T ss_dssp SCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcC
Confidence 578999999999999999999999999999 5688888899998888763 35676765 678888999999999999
Q ss_pred CCEEeec
Q 012949 373 ISTVDCS 379 (452)
Q Consensus 373 a~~VD~S 379 (452)
|+.+=..
T Consensus 97 adavlv~ 103 (291)
T 3tak_A 97 ADAALLV 103 (291)
T ss_dssp CSEEEEE
T ss_pred CCEEEEc
Confidence 9987554
No 219
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=90.29 E-value=0.97 Score=43.89 Aligned_cols=12 Identities=0% Similarity=-0.161 Sum_probs=5.8
Q ss_pred HHHHHHhCCCcE
Q 012949 273 VAHAAKVLSIPV 284 (452)
Q Consensus 273 ~v~~Ak~~G~~V 284 (452)
+++.+.+.|+++
T Consensus 31 i~~~L~~~Gv~~ 42 (295)
T 1ydn_A 31 LINRLSDCGYAR 42 (295)
T ss_dssp HHHHHTTTTCSE
T ss_pred HHHHHHHcCcCE
Confidence 344444555553
No 220
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=90.22 E-value=2.8 Score=41.05 Aligned_cols=220 Identities=14% Similarity=0.128 Sum_probs=129.3
Q ss_pred HHHHHHHCCCCEEEEecC-CC-CCcccc--cCCHHHHHHHHHhcc-CCceeEEecchhhhhhhhhhhhhccchhhhhhhh
Q 012949 153 LIRRLVSSGLPVVEATSF-VS-PKWVPQ--LADARDVMEAVRDLE-GARLPVLTPNLKVILQRSILFQQCHASVISSNLW 227 (452)
Q Consensus 153 i~~~L~~~Gv~~IEvG~~-~s-~~~~p~--~~D~e~v~~~i~~~~-~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~ 227 (452)
-++.++++||+.|=+|.. ++ ....|. .-+.++++..++.+. .+.+++++. .. .+|+ .+.++.+
T Consensus 27 sA~~~~~aG~~ai~vs~~~~a~~~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD-~d------~Gyg-~~~~~~~---- 94 (290)
T 2hjp_A 27 VAKLAEQAGFGGIWGSGFELSASYAVPDANILSMSTHLEMMRAIASTVSIPLIAD-ID------TGFG-NAVNVHY---- 94 (290)
T ss_dssp HHHHHHHHTCSEEEECHHHHHHHTTSCTTTCSCHHHHHHHHHHHHTTCSSCEEEE-CT------TTTS-SHHHHHH----
T ss_pred HHHHHHHcCCCEEEEChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEE-CC------CCCC-CHHHHHH----
Confidence 366778899999999952 11 022332 135678888888764 345554442 11 3465 3344333
Q ss_pred ccHHhHHHHHHcCCCEEEEEecCChH---HHh--hhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCH
Q 012949 228 VYLQGFEAAIAAGAKEVAIFASASEA---FSK--SNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPP 302 (452)
Q Consensus 228 ~~~~~ie~a~~~Gi~~V~i~~s~Sd~---~~~--~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~ 302 (452)
.+.+..++|+.-|+|-....+- |.. .+-=.+.++..++++.+++....-++.|.+---. .......
T Consensus 95 ----~v~~l~~aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aRtda-----~~a~~g~ 165 (290)
T 2hjp_A 95 ----VVPQYEAAGASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIARVEA-----LIAGLGQ 165 (290)
T ss_dssp ----HHHHHHHHTCSEEEEECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECT-----TTTTCCH
T ss_pred ----HHHHHHHhCCeEEEEcCCCCCccccccccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehH-----hhccccH
Confidence 6677778999999999876421 111 1111356677877766555544445555432110 0011235
Q ss_pred HHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcC-CCEEeeccc
Q 012949 303 SKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMG-ISTVDCSVA 381 (452)
Q Consensus 303 e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aG-a~~VD~Sv~ 381 (452)
+...+=++...++|||.|.+.= ++-+++.+.++.+.+...+| +-+-.-.-..+ ..-.--++| +++|-....
T Consensus 166 ~~ai~Ra~ay~eAGAd~i~~e~--~~~~~~~~~~i~~~~~~~vP---~i~n~~~~~~~---~~~eL~~lG~v~~v~~~~~ 237 (290)
T 2hjp_A 166 QEAVRRGQAYEEAGADAILIHS--RQKTPDEILAFVKSWPGKVP---LVLVPTAYPQL---TEADIAALSKVGIVIYGNH 237 (290)
T ss_dssp HHHHHHHHHHHHTTCSEEEECC--CCSSSHHHHHHHHHCCCSSC---EEECGGGCTTS---CHHHHHTCTTEEEEEECSH
T ss_pred HHHHHHHHHHHHcCCcEEEeCC--CCCCHHHHHHHHHHcCCCCC---EEEeccCCCCC---CHHHHHhcCCeeEEEechH
Confidence 7788888899999999999843 13456777666665543233 33322111222 223444689 998887777
Q ss_pred CCCCCCCCCCCCCcccHHHHHHHHHcCC
Q 012949 382 GLGGCPYAKGASGNVATEDVVYMLSGLG 409 (452)
Q Consensus 382 GlGecP~a~graGNaalE~vv~~L~~~G 409 (452)
.+ |+-+.++++++..++..|
T Consensus 238 ~~--------raa~~a~~~~~~~i~~~g 257 (290)
T 2hjp_A 238 AI--------RAAVGAVREVFARIRRDG 257 (290)
T ss_dssp HH--------HHHHHHHHHHHHHHHHHT
T ss_pred HH--------HHHHHHHHHHHHHHHHcC
Confidence 65 677888899888887643
No 221
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=90.21 E-value=4.3 Score=41.00 Aligned_cols=120 Identities=10% Similarity=0.089 Sum_probs=77.5
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCC---------------CC---------------CCCCH--------
Q 012949 261 CSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCP---------------VE---------------GAIPP-------- 302 (452)
Q Consensus 261 ~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p---------------~~---------------~r~d~-------- 302 (452)
...++.++..+++++.+++.|-++.+-|... |-- -+ ....|
T Consensus 84 i~~d~~i~~~k~l~~avh~~G~~i~~QL~H~-Gr~~~~~~~~~~~~~~apS~~~~~~~~~~~~~~~~~~~~p~~mt~~eI 162 (376)
T 1icp_A 84 IWTKEQVEAWKPIVDAVHAKGGIFFCQIWHV-GRVSNKDFQPNGEDPISCTDRGLTPQIMSNGIDIAHFTRPRRLTTDEI 162 (376)
T ss_dssp CSSHHHHHHHHHHHHHHHHTTCEEEEEEECC-TTSSCTTTSGGGCCCEESSSCCCCCEECTTSSCEECCCCCEECCTTTH
T ss_pred cCCHHHHHHHHHHHHHHHhcCCeEEEEeecC-CCCcCcccccCCCceecCCCCCCccccccccccccCCCCCCcCCHHHH
Confidence 3346677888888889999998887777652 100 00 00112
Q ss_pred ----HHHHHHHHHHHHCCcCEEEEc-------------------CCcCCCc---HHHHHHHHHHHHHhCCCccEEEEeCC
Q 012949 303 ----SKVAYVAKELHDMGCFEISLG-------------------DTIGVGT---PGTVVPMLEAVMAVVPVEKLAVHLHD 356 (452)
Q Consensus 303 ----e~l~~~a~~l~~~Gad~I~L~-------------------DT~G~~~---P~~v~~li~~l~~~~p~~~l~vH~Hn 356 (452)
+.+++.|+.+.++|.|.|-|- |-.|... +..+.++|+++++.++..+|.+-.+-
T Consensus 163 ~~~i~~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vrls~ 242 (376)
T 1icp_A 163 PQIVNEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISP 242 (376)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECT
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEEecc
Confidence 467778889999999988772 4445433 33478889999999873378877663
Q ss_pred C-------cCc----HHHHHHHHHHcCCCEEeeccc
Q 012949 357 T-------YGQ----SLPNILISLQMGISTVDCSVA 381 (452)
Q Consensus 357 d-------~Gl----A~ANaLaAl~aGa~~VD~Sv~ 381 (452)
+ .+. ++.-+-+.-++|+++|+.+..
T Consensus 243 ~~~~~g~~~~~~~~~~~~la~~le~~Gvd~i~v~~~ 278 (376)
T 1icp_A 243 FAHYNEAGDTNPTALGLYMVESLNKYDLAYCHVVEP 278 (376)
T ss_dssp TCCTTTCCCSCHHHHHHHHHHHHGGGCCSEEEEECC
T ss_pred ccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 2 123 223333334689999999754
No 222
>2a5h_A L-lysine 2,3-aminomutase; radical SAM, four-iron-four-sulfur cluster, 4Fe4S, FS4, SAM, adenosylmethionine, alpha-beta channel; HET: SAM LYS PLP; 2.10A {Clostridium subterminale}
Probab=90.18 E-value=15 Score=37.36 Aligned_cols=167 Identities=9% Similarity=0.055 Sum_probs=95.8
Q ss_pred CCCHHHHHHHHHHHHH-CCCCEEEEecCCCCCcccccC-C--HHHHHHHHHhccCCceeEEecchhhhhhhhhhhhhccc
Q 012949 144 TVPTGVKVELIRRLVS-SGLPVVEATSFVSPKWVPQLA-D--ARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHA 219 (452)
Q Consensus 144 ~~~~~~k~~i~~~L~~-~Gv~~IEvG~~~s~~~~p~~~-D--~e~v~~~i~~~~~~~l~~l~~~~~~~i~r~~~~~~~~~ 219 (452)
.++.++..++++.+.+ .|+..|-++.. - |-+. | ..++++.++++++.+...+..+.. +.+.
T Consensus 144 ~ls~eei~~~i~~i~~~~gi~~V~ltGG-E----Pll~~d~~L~~il~~l~~~~~v~~i~i~Tng~------~~~p---- 208 (416)
T 2a5h_A 144 SMPMERIDKAIDYIRNTPQVRDVLLSGG-D----ALLVSDETLEYIIAKLREIPHVEIVRIGSRTP------VVLP---- 208 (416)
T ss_dssp BCCHHHHHHHHHHHHTCTTCCEEEEEES-C----TTSSCHHHHHHHHHHHHTSTTCCEEEEECSHH------HHCG----
T ss_pred CCCHHHHHHHHHHHHhcCCCcEEEEECC-C----CCCCCHHHHHHHHHHHHhcCCccEEEEEeccc------cccc----
Confidence 4789999999999988 79988777542 1 3232 3 355666666655443221222110 0000
Q ss_pred hhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCC
Q 012949 220 SVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGA 299 (452)
Q Consensus 220 ~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r 299 (452)
...+.+-++...+. +.|.|.+..+.. ..+ + +.+.++++.+++.|+.+.......-|- -
T Consensus 209 ------~~it~e~l~~L~~~--~~v~Isl~~~~~---~ei--~-----~~v~~ai~~L~~aGi~v~i~~vll~Gv----N 266 (416)
T 2a5h_A 209 ------QRITPELVNMLKKY--HPVWLNTHFNHP---NEI--T-----EESTRACQLLADAGVPLGNQSVLLRGV----N 266 (416)
T ss_dssp ------GGCCHHHHHHHGGG--CSEEEEECCCSG---GGC--C-----HHHHHHHHHHHHTTCCEEEEEECCTTT----T
T ss_pred ------ccCCHHHHHHHHhc--CcEEEEEecCCH---HHH--h-----HHHHHHHHHHHHcCCEEEEEEEEECCC----C
Confidence 00122345555555 667777655432 112 2 556677788899999876433221111 1
Q ss_pred CCHHHHHHHHHHHHHCCcCE--EEEcCCc-CC----CcHHHHHHHHHHHHHhCCC
Q 012949 300 IPPSKVAYVAKELHDMGCFE--ISLGDTI-GV----GTPGTVVPMLEAVMAVVPV 347 (452)
Q Consensus 300 ~d~e~l~~~a~~l~~~Gad~--I~L~DT~-G~----~~P~~v~~li~~l~~~~p~ 347 (452)
.+.+.+.++++.+.+.|++. +.+.+.. |. ..+....++++.+++.+++
T Consensus 267 d~~e~l~~l~~~l~~lgv~~~~i~~~~~~~g~~~~~~~~~~~~eil~~l~~~~~G 321 (416)
T 2a5h_A 267 DCVHVMKELVNKLVKIRVRPYYIYQCDLSLGLEHFRTPVSKGIEIIEGLRGHTSG 321 (416)
T ss_dssp CSHHHHHHHHHHHHHTTEEEEEEECCCCBTTCGGGCCCHHHHHHHHHTTBTTBCG
T ss_pred CCHHHHHHHHHHHHHcCCceEEEeecCCCCCcccccCCcccHHHHHHHHHHHCCC
Confidence 34567889999999999874 4555642 32 2345667778877776543
No 223
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=90.08 E-value=5.3 Score=40.36 Aligned_cols=119 Identities=13% Similarity=0.114 Sum_probs=76.6
Q ss_pred CHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecC---------------CCC--------------------CCCCH----
Q 012949 262 SIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGC---------------PVE--------------------GAIPP---- 302 (452)
Q Consensus 262 s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~---------------p~~--------------------~r~d~---- 302 (452)
..++.++..+++++.+++.|-++.+-|... |- |-+ ....|
T Consensus 79 ~~d~~i~~~k~l~~avh~~G~~i~~QL~H~-Gr~~~~~~~~~~~~~~apS~i~~~~~~~~~~~~~~~~~~~~~~~p~~mt 157 (377)
T 2r14_A 79 WTDAQEAGWKGVVEAVHAKGGRIALQLWHV-GRVSHELVQPDGQQPVAPSALKAEGAECFVEFEDGTAGLHPTSTPRALE 157 (377)
T ss_dssp SSHHHHHHHHHHHHHHHHTTCCEEEEEECC-TTSCCTTTSGGGCCCEESSSCCCTTCEEEEECTTSCEEEEECCCCEECC
T ss_pred CCHHHHHHHHHHHHHHhhcCCeEEEEccCC-ccccccccccCCCcccCCCcccccccccccccccccccccCCCCCccCC
Confidence 345667778888888999998887767652 10 000 00123
Q ss_pred --------HHHHHHHHHHHHCCcCEEEE-------------------cCCcCCCcH---HHHHHHHHHHHHhCCCccEEE
Q 012949 303 --------SKVAYVAKELHDMGCFEISL-------------------GDTIGVGTP---GTVVPMLEAVMAVVPVEKLAV 352 (452)
Q Consensus 303 --------e~l~~~a~~l~~~Gad~I~L-------------------~DT~G~~~P---~~v~~li~~l~~~~p~~~l~v 352 (452)
+.+++.|+.+.++|.|.|-| .|-.|.... .-+.++|+++++.++..+|.+
T Consensus 158 ~~eI~~~i~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~v 237 (377)
T 2r14_A 158 TDEIPGIVEDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGI 237 (377)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEE
Confidence 56677888889999998887 255565433 346788999999886337777
Q ss_pred EeCC--Cc-----CcHHH----HHHHHHHcCCCEEeeccc
Q 012949 353 HLHD--TY-----GQSLP----NILISLQMGISTVDCSVA 381 (452)
Q Consensus 353 H~Hn--d~-----GlA~A----NaLaAl~aGa~~VD~Sv~ 381 (452)
-..- .+ |.... -+.+.-++|+++|+.+..
T Consensus 238 rls~~~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~ 277 (377)
T 2r14_A 238 RLTPFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEP 277 (377)
T ss_dssp EECTTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred EeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 6532 11 23222 334444799999998764
No 224
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=90.05 E-value=1.5 Score=44.49 Aligned_cols=69 Identities=14% Similarity=0.089 Sum_probs=52.1
Q ss_pred HHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEeec
Q 012949 305 VAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCS 379 (452)
Q Consensus 305 l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~S 379 (452)
..+.++.+.++|++.|.| ||... .|..+.+.|+.+++.+|++++.... .....-+..++++|||.|.+.
T Consensus 109 ~~~~~~~lieaGvd~I~i-dta~G-~~~~~~~~I~~ik~~~p~v~Vi~G~----v~t~e~A~~a~~aGAD~I~vG 177 (366)
T 4fo4_A 109 NEERVKALVEAGVDVLLI-DSSHG-HSEGVLQRIRETRAAYPHLEIIGGN----VATAEGARALIEAGVSAVKVG 177 (366)
T ss_dssp CHHHHHHHHHTTCSEEEE-ECSCT-TSHHHHHHHHHHHHHCTTCEEEEEE----ECSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHhCCCCEEEE-eCCCC-CCHHHHHHHHHHHHhcCCCceEeee----eCCHHHHHHHHHcCCCEEEEe
Confidence 345678889999999887 66543 4667888999999999877665531 123567788899999999983
No 225
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=90.03 E-value=3.7 Score=40.85 Aligned_cols=119 Identities=17% Similarity=0.181 Sum_probs=76.9
Q ss_pred HHHHHHHHHHHHHHHhCCCcEEEEEEeeecC----------CCC------C----CCCH-------HHHHHHHHHHHHCC
Q 012949 264 EDSLVRYRAVAHAAKVLSIPVRGYVSCVVGC----------PVE------G----AIPP-------SKVAYVAKELHDMG 316 (452)
Q Consensus 264 e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~----------p~~------~----r~d~-------e~l~~~a~~l~~~G 316 (452)
++.++..+++++.+++.|-++.+-|.+. |- |-. . ..+. +.+.+.|+.+.++|
T Consensus 79 d~~i~~~~~~~~~vh~~G~~i~~QL~H~-Gr~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~~aG 157 (340)
T 3gr7_A 79 DDHIAGLRELVGLVKEHGAAIGIQLAHA-GRKSQVPGEIIAPSAVPFDDSSPTPKEMTKADIEETVQAFQNGARRAKEAG 157 (340)
T ss_dssp TTHHHHHHHHHHHHHHTTCEEEEEEECC-GGGCCSSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEEeccC-CCccCCCCCccCCCCccccCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 4567888899999999999887777652 20 000 0 0122 24455677788899
Q ss_pred cCEEEEc-------------------CCcCCCcH---HHHHHHHHHHHHhCCCccEEEEeCCC--------cCcHHHHHH
Q 012949 317 CFEISLG-------------------DTIGVGTP---GTVVPMLEAVMAVVPVEKLAVHLHDT--------YGQSLPNIL 366 (452)
Q Consensus 317 ad~I~L~-------------------DT~G~~~P---~~v~~li~~l~~~~p~~~l~vH~Hnd--------~GlA~ANaL 366 (452)
.|.|.|- |-.|...- .-+.++|+++++.+ +.+|.+-..-+ ....+.-+.
T Consensus 158 fDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v-~~pv~vRls~~~~~~~g~~~~~~~~la~ 236 (340)
T 3gr7_A 158 FDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVW-DGPLFVRISASDYHPDGLTAKDYVPYAK 236 (340)
T ss_dssp CSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSCEEEEEESCCCSTTSCCGGGHHHHHH
T ss_pred CCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhc-CCceEEEeccccccCCCCCHHHHHHHHH
Confidence 9977763 44554322 33688999999988 55677755532 233444444
Q ss_pred HHHHcCCCEEeecccCCC
Q 012949 367 ISLQMGISTVDCSVAGLG 384 (452)
Q Consensus 367 aAl~aGa~~VD~Sv~GlG 384 (452)
..-++|+++|+.+-.+..
T Consensus 237 ~L~~~Gvd~i~vs~g~~~ 254 (340)
T 3gr7_A 237 RMKEQGVDLVDVSSGAIV 254 (340)
T ss_dssp HHHHTTCCEEEEECCCSS
T ss_pred HHHHcCCCEEEEecCCcc
Confidence 555799999999875543
No 226
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=90.02 E-value=1.1 Score=44.99 Aligned_cols=70 Identities=10% Similarity=0.042 Sum_probs=51.3
Q ss_pred HHHHHHHHC--CcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEeecccC
Q 012949 307 YVAKELHDM--GCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCSVAG 382 (452)
Q Consensus 307 ~~a~~l~~~--Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~Sv~G 382 (452)
+.++.+.+. |++.|.+-=+.| .|..+.+.|+.+++.+|+++|.+.. .+....+..|+++|||.|+++..|
T Consensus 121 ~~~~~l~~~~~g~~~i~i~~~~g--~~~~~~~~i~~lr~~~~~~~vi~g~----v~t~e~A~~a~~aGaD~I~v~~g~ 192 (351)
T 2c6q_A 121 EQLEQILEAIPQVKYICLDVANG--YSEHFVEFVKDVRKRFPQHTIMAGN----VVTGEMVEELILSGADIIKVGIGP 192 (351)
T ss_dssp HHHHHHHHHCTTCCEEEEECSCT--TBHHHHHHHHHHHHHCTTSEEEEEE----ECSHHHHHHHHHTTCSEEEECSSC
T ss_pred HHHHHHHhccCCCCEEEEEecCC--CcHHHHHHHHHHHHhcCCCeEEEEe----CCCHHHHHHHHHhCCCEEEECCCC
Confidence 345556665 889877632333 5677888999999999776777653 445678899999999999997543
No 227
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=89.97 E-value=8.5 Score=36.42 Aligned_cols=142 Identities=20% Similarity=0.184 Sum_probs=90.0
Q ss_pred hHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHHH
Q 012949 232 GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKE 311 (452)
Q Consensus 232 ~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~ 311 (452)
-.+.|.+.|+.-|-+.- .+ +..+ +..+..++.| +.+.|+|. +..+.+.-+.-++.
T Consensus 34 lc~eA~~~~~~aVcV~p----~~------------v~~a----~~l~~~~v~v----~tVigFP~-G~~~~~~K~~E~~~ 88 (231)
T 3ndo_A 34 LVDEAADLGVFAVCVSP----PL------------VSVA----AGVAPSGLAI----AAVAGFPS-GKHVPGIKATEAEL 88 (231)
T ss_dssp HHHHHHHHTCSEEEECG----GG------------HHHH----HHHCCTTCEE----EEEESTTT-CCSCHHHHHHHHHH
T ss_pred HHHHHHHhCCcEEEECH----HH------------HHHH----HHhcCCCCeE----EEEecCCC-CCCcHHHHHHHHHH
Confidence 45677788988777642 11 1211 1223334444 34456775 45556666667788
Q ss_pred HHHCCcCEEEEcCCcCC---CcHHHHHHHHHHHHHhCCCccE----EEEe----CCCcCcHHHHHHHHHHcCCCEEeecc
Q 012949 312 LHDMGCFEISLGDTIGV---GTPGTVVPMLEAVMAVVPVEKL----AVHL----HDTYGQSLPNILISLQMGISTVDCSV 380 (452)
Q Consensus 312 l~~~Gad~I~L~DT~G~---~~P~~v~~li~~l~~~~p~~~l----~vH~----Hnd~GlA~ANaLaAl~aGa~~VD~Sv 380 (452)
+.+.|||.|-+.=-+|. ..-+.+.+-|+.+++..++.++ +-.. |++- .=...+..|.++|||+|=+|-
T Consensus 89 Ai~~GAdEIDmVinig~lk~g~~~~v~~ei~~v~~a~~~~~lKvIiEt~~L~~~~t~e-ei~~a~~ia~~aGADfVKTST 167 (231)
T 3ndo_A 89 AVAAGATEIDMVIDVGAALAGDLDAVSADITAVRKAVRAATLKVIVESAALLEFSGEP-LLADVCRVARDAGADFVKTST 167 (231)
T ss_dssp HHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCHHHHHHHTCHH-HHHHHHHHHHHTTCSEEECCC
T ss_pred HHHcCCCEEEEEeehHhhhcccHHHHHHHHHHHHHHccCCceEEEEECcccCCCCCHH-HHHHHHHHHHHHCcCEEEcCC
Confidence 89999999998877887 5667788888999888754322 2111 1222 223455678899999998875
Q ss_pred cCCCCCCCCCCCCCcccHHHHHHHHHc
Q 012949 381 AGLGGCPYAKGASGNVATEDVVYMLSG 407 (452)
Q Consensus 381 ~GlGecP~a~graGNaalE~vv~~L~~ 407 (452)
|.+. +|++.+|++-.+.+.
T Consensus 168 -Gf~~-------~~gAt~edv~lm~~~ 186 (231)
T 3ndo_A 168 -GFHP-------SGGASVQAVEIMART 186 (231)
T ss_dssp -SCCT-------TCSCCHHHHHHHHHH
T ss_pred -CCCC-------CCCCCHHHHHHHHHH
Confidence 3331 356888888877764
No 228
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=89.96 E-value=2.5 Score=41.14 Aligned_cols=135 Identities=15% Similarity=0.166 Sum_probs=87.4
Q ss_pred HHHHHHcCCCEEEEE-ecCChHHHhhh-cCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHH
Q 012949 233 FEAAIAAGAKEVAIF-ASASEAFSKSN-INCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 310 (452)
Q Consensus 233 ie~a~~~Gi~~V~i~-~s~Sd~~~~~~-~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~ 310 (452)
...+.++|++.|.+. .+++-.+-..- ...|.++.+..++.+.+.+ .++|.+-+ |...-.+++.+.+.++
T Consensus 29 A~~~~~aG~~ai~vsg~s~a~~~G~pD~~~vt~~em~~~~~~I~~~~---~~pviaD~------d~Gyg~~~~~~~~~v~ 99 (275)
T 2ze3_A 29 ARLLEAAGFTAIGTTSAGIAHARGRTDGQTLTRDEMGREVEAIVRAV---AIPVNADI------EAGYGHAPEDVRRTVE 99 (275)
T ss_dssp HHHHHHHTCSCEEECHHHHHHHSCCCSSSSSCHHHHHHHHHHHHHHC---SSCEEEEC------TTCSSSSHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECcHHHHHhCCCCCCCCCCHHHHHHHHHHHHhhc---CCCEEeec------CCCCCCCHHHHHHHHH
Confidence 344556899988876 34432111111 1457888888876666554 35665322 3332236889999999
Q ss_pred HHHHCCcCEEEEcCCcC-----CCcHHHHHHHHHHHHHhCC--CccEEEEeCCCc-------------CcHHHHHHHHHH
Q 012949 311 ELHDMGCFEISLGDTIG-----VGTPGTVVPMLEAVMAVVP--VEKLAVHLHDTY-------------GQSLPNILISLQ 370 (452)
Q Consensus 311 ~l~~~Gad~I~L~DT~G-----~~~P~~v~~li~~l~~~~p--~~~l~vH~Hnd~-------------GlA~ANaLaAl~ 370 (452)
.+.++|+..|.|-|..+ +..++++.+.|+++++... ++++-+-.-.|- --++.-+.+-.+
T Consensus 100 ~l~~aGaagv~iED~~~~~~k~l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtda~~~~~g~~~~~~~~~ai~Ra~ay~e 179 (275)
T 2ze3_A 100 HFAALGVAGVNLEDATGLTPTELYDLDSQLRRIEAARAAIDASGVPVFLNARTDTFLKGHGATDEERLAETVRRGQAYAD 179 (275)
T ss_dssp HHHHTTCSEEEEECBCSSSSSCBCCHHHHHHHHHHHHHHHHHHTSCCEEEEECCTTTTTCSSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCcEEEECCCcCCCCCccCCHHHHHHHHHHHHHhHhhcCCCeEEEEechhhhccccccchhhHHHHHHHHHHHHH
Confidence 99999999999999974 5566778888888887621 223444444332 235566667778
Q ss_pred cCCCEE
Q 012949 371 MGISTV 376 (452)
Q Consensus 371 aGa~~V 376 (452)
|||+.|
T Consensus 180 AGAd~i 185 (275)
T 2ze3_A 180 AGADGI 185 (275)
T ss_dssp TTCSEE
T ss_pred CCCCEE
Confidence 999965
No 229
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=89.92 E-value=16 Score=36.78 Aligned_cols=173 Identities=18% Similarity=0.153 Sum_probs=91.0
Q ss_pred HHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEecchhhhhhhhhhhhhccchhhhhhhhc
Q 012949 149 VKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLWV 228 (452)
Q Consensus 149 ~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~~ 228 (452)
.-.+++.++.++|.- |.... ....+++.+.+++.... .....+.+ . .
T Consensus 54 te~~lA~A~a~~Gg~----gvi~~------~~s~ee~~~~i~~~~~~--~~~~~g~~-------------~--------~ 100 (361)
T 3r2g_A 54 TESNMANFMHSKGAM----GALHR------FMTIEENIQEFKKCKGP--VFVSVGCT-------------E--------N 100 (361)
T ss_dssp CSHHHHHHHHHTTCE----EBCCS------CSCHHHHHHHHHTCCSC--CBEEECSS-------------H--------H
T ss_pred hHHHHHHHHHHcCCC----EEEeC------CCCHHHHHHHHhhcceE--EEEEcCCC-------------H--------H
Confidence 337888999999852 22111 13467777777654321 11111111 0 0
Q ss_pred cHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhC--CCcEEE-EEEeeecCCCCCCCCHHHH
Q 012949 229 YLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVL--SIPVRG-YVSCVVGCPVEGAIPPSKV 305 (452)
Q Consensus 229 ~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~--G~~V~~-~l~~~~g~p~~~r~d~e~l 305 (452)
..+.+++++++|++.|.+-.+.- .+ +.+.+.++.+|+. ++.|.+ ++. ++
T Consensus 101 ~~e~~~~a~~aGvdvI~id~a~G---------~~-----~~~~e~I~~ir~~~~~~~Vi~G~V~-----------T~--- 152 (361)
T 3r2g_A 101 ELQRAEALRDAGADFFCVDVAHA---------HA-----KYVGKTLKSLRQLLGSRCIMAGNVA-----------TY--- 152 (361)
T ss_dssp HHHHHHHHHHTTCCEEEEECSCC---------SS-----HHHHHHHHHHHHHHTTCEEEEEEEC-----------SH---
T ss_pred HHHHHHHHHHcCCCEEEEeCCCC---------Cc-----HhHHHHHHHHHHhcCCCeEEEcCcC-----------CH---
Confidence 12467889999999777643321 11 1223556667765 666653 222 23
Q ss_pred HHHHHHHHHCCcCEEEEcCCcCCCcHHHH-----HHHHHHHHHhCCCc-cEEEEeCCCcCcH-HHHHHHHHHcCCCEEe-
Q 012949 306 AYVAKELHDMGCFEISLGDTIGVGTPGTV-----VPMLEAVMAVVPVE-KLAVHLHDTYGQS-LPNILISLQMGISTVD- 377 (452)
Q Consensus 306 ~~~a~~l~~~Gad~I~L~DT~G~~~P~~v-----~~li~~l~~~~p~~-~l~vH~Hnd~GlA-~ANaLaAl~aGa~~VD- 377 (452)
+.++.+.++|+|.|.+.=.-|.....+. ...+..+++..... +|- -|=|.. -..+..|+.+||+.|-
T Consensus 153 -e~A~~a~~aGaD~I~Vg~g~G~~~~tr~~~g~g~p~l~aI~~~~~~~~PVI----AdGGI~~~~di~kALa~GAd~V~i 227 (361)
T 3r2g_A 153 -AGADYLASCGADIIKAGIGGGSVCSTRIKTGFGVPMLTCIQDCSRADRSIV----ADGGIKTSGDIVKALAFGADFVMI 227 (361)
T ss_dssp -HHHHHHHHTTCSEEEECCSSSSCHHHHHHHCCCCCHHHHHHHHTTSSSEEE----EESCCCSHHHHHHHHHTTCSEEEE
T ss_pred -HHHHHHHHcCCCEEEEcCCCCcCccccccCCccHHHHHHHHHHHHhCCCEE----EECCCCCHHHHHHHHHcCCCEEEE
Confidence 3477888999999998322121110000 01233333332211 222 234543 4678888999999654
Q ss_pred -ecccCCCCCC
Q 012949 378 -CSVAGLGGCP 387 (452)
Q Consensus 378 -~Sv~GlGecP 387 (452)
..+.|-=|||
T Consensus 228 Gr~f~~t~Esp 238 (361)
T 3r2g_A 228 GGMLAGSAPTP 238 (361)
T ss_dssp SGGGTTBTTSS
T ss_pred ChHHhCCccCC
Confidence 4566666665
No 230
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=89.91 E-value=1.5 Score=43.17 Aligned_cols=81 Identities=11% Similarity=0.153 Sum_probs=71.1
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCcCC---CcHHHHHHHHHHHHHhCCCccEEEEe-CCCcCcHHHHHHHHHHcCC
Q 012949 298 GAIPPSKVAYVAKELHDMGCFEISLGDTIGV---GTPGTVVPMLEAVMAVVPVEKLAVHL-HDTYGQSLPNILISLQMGI 373 (452)
Q Consensus 298 ~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~li~~l~~~~p~~~l~vH~-Hnd~GlA~ANaLaAl~aGa 373 (452)
+..|.+.+.++++.+.+.|++.|.++-|+|= ++.++-.++++.+.+..+.++|-++. +++..-++..+..|-++||
T Consensus 24 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga 103 (313)
T 3dz1_A 24 GKIDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIVGVSAPGFAAMRRLARLSMDAGA 103 (313)
T ss_dssp SCBCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEEECCCSSHHHHHHHHHHHHHHTC
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEEecCCCCHHHHHHHHHHHHHcCC
Confidence 5789999999999999999999999999994 78899999999998887556777766 6888899999999999999
Q ss_pred CEEee
Q 012949 374 STVDC 378 (452)
Q Consensus 374 ~~VD~ 378 (452)
+.+=.
T Consensus 104 davlv 108 (313)
T 3dz1_A 104 AGVMI 108 (313)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 98855
No 231
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=89.91 E-value=1.4 Score=42.99 Aligned_cols=82 Identities=13% Similarity=0.029 Sum_probs=70.0
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCcC---CCcHHHHHHHHHHHHHhCC-CccEEEEe-CCCcCcHHHHHHHHHHcC
Q 012949 298 GAIPPSKVAYVAKELHDMGCFEISLGDTIG---VGTPGTVVPMLEAVMAVVP-VEKLAVHL-HDTYGQSLPNILISLQMG 372 (452)
Q Consensus 298 ~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G---~~~P~~v~~li~~l~~~~p-~~~l~vH~-Hnd~GlA~ANaLaAl~aG 372 (452)
+..|.+-+.++++.+.+.|++.|.++-|+| .+++++-.++++.+.+... .++|-+|. +++..-++..+..|-++|
T Consensus 23 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~G 102 (297)
T 3flu_A 23 GSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAG 102 (297)
T ss_dssp SCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcC
Confidence 578999999999999999999999999999 5688888899998888763 35666665 678888999999999999
Q ss_pred CCEEeec
Q 012949 373 ISTVDCS 379 (452)
Q Consensus 373 a~~VD~S 379 (452)
|+.+=..
T Consensus 103 adavlv~ 109 (297)
T 3flu_A 103 ADYTLSV 109 (297)
T ss_dssp CSEEEEE
T ss_pred CCEEEEC
Confidence 9977654
No 232
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=89.84 E-value=1.5 Score=41.30 Aligned_cols=243 Identities=10% Similarity=0.041 Sum_probs=117.5
Q ss_pred HHHHHHHHHCCCCEEEEecCCCCCccccc--CCHHHHHHHHHhccCCceeEEecchhhhhhhhhhhhhccchhhhhhhhc
Q 012949 151 VELIRRLVSSGLPVVEATSFVSPKWVPQL--ADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLWV 228 (452)
Q Consensus 151 ~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~--~D~e~v~~~i~~~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~~ 228 (452)
.+.++.+.++|++.||+..+..+ +++.. .+.+++.+.+++ .++++.++.+....- ........++ .
T Consensus 18 ~~~l~~~~~~G~~~vEl~~~~~~-~~~~~~~~~~~~~~~~l~~-~gl~~~~~~~~~~~~------~~~~~~~~~~----~ 85 (286)
T 3dx5_A 18 TDIVQFAYENGFEGIELWGTHAQ-NLYMQEYETTERELNCLKD-KTLEITMISDYLDIS------LSADFEKTIE----K 85 (286)
T ss_dssp HHHHHHHHHTTCCEEEEEHHHHH-HHHHHCHHHHHHHHHHTGG-GTCCEEEEECCCCCS------TTSCHHHHHH----H
T ss_pred HHHHHHHHHhCCCEEEEcccccc-cccccCHHHHHHHHHHHHH-cCCeEEEEecCCCCC------CchhHHHHHH----H
Confidence 35677778899999999532100 01101 112222233322 466666665432100 0000001111 1
Q ss_pred cHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHH
Q 012949 229 YLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYV 308 (452)
Q Consensus 229 ~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~ 308 (452)
..+.++.|.+.|++.|.++....... .......+...+.+.++.++|++.|+.+. +... +...-.+++.+.++
T Consensus 86 ~~~~i~~A~~lG~~~v~~~~g~~~~~--~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~--lE~~---~~~~~~~~~~~~~l 158 (286)
T 3dx5_A 86 CEQLAILANWFKTNKIRTFAGQKGSA--DFSQQERQEYVNRIRMICELFAQHNMYVL--LETH---PNTLTDTLPSTLEL 158 (286)
T ss_dssp HHHHHHHHHHHTCCEEEECSCSSCGG--GSCHHHHHHHHHHHHHHHHHHHHTTCEEE--EECC---TTSTTSSHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEcCCCCCcc--cCcHHHHHHHHHHHHHHHHHHHHhCCEEE--EecC---CCcCcCCHHHHHHH
Confidence 23477888899999999875432110 00001235566777788899999998754 3321 22222456777777
Q ss_pred HHHHHHCCcCEE-EEcCCcCCCcH-HHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHH---HHH-HcCCCEEeecccC
Q 012949 309 AKELHDMGCFEI-SLGDTIGVGTP-GTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNIL---ISL-QMGISTVDCSVAG 382 (452)
Q Consensus 309 a~~l~~~Gad~I-~L~DT~G~~~P-~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaL---aAl-~aGa~~VD~Sv~G 382 (452)
++.+ +.+.+ ..-|+.=.... ....+.++.+.. --..+|++|..+-.....+ ..+ ..|... .-..
T Consensus 159 ~~~~---~~~~vg~~~D~~h~~~~g~d~~~~l~~~~~----~i~~vHl~D~~~~~~~~~~~~~~~~~~~g~~~---~~~~ 228 (286)
T 3dx5_A 159 LGEV---DHPNLKINLDFLHIWESGADPVDSFQQLRP----WIQHYHFKNISSADYLHVFEPNNVYAAAGNRT---GMVP 228 (286)
T ss_dssp HHHH---CCTTEEEEEEHHHHHHTTCCHHHHHHHHGG----GEEEEEECEESCGGGGGGGSHHHHHSTTCCCT---TEEC
T ss_pred HHhc---CCCCeEEEeccccHhhcCCCHHHHHHHHHh----HheEEEecCCcccccccccCccccccccCcce---eeec
Confidence 6655 32222 22255322111 112333443332 2367999998774210000 000 012110 0112
Q ss_pred CCCCCCCCCCCCcccHHHHHHHHHcC-C---CCC-CCC-hhhHHHHHHHHHHHh
Q 012949 383 LGGCPYAKGASGNVATEDVVYMLSGL-G---VET-NVD-LRKLMLAGDFINKHL 430 (452)
Q Consensus 383 lGecP~a~graGNaalE~vv~~L~~~-G---i~t-~iD-l~~L~~la~~v~~~~ 430 (452)
+| .|..+...++..|+.. | ++. +-| ++.+.+-.+++.+..
T Consensus 229 ~G--------~G~id~~~i~~~L~~~~g~~~lE~~~~d~~~~~~~s~~~Lr~~~ 274 (286)
T 3dx5_A 229 LF--------EGIVNYDEIIQEVRDTDHFASLEWFGHNAKDILKAEMKVLTNRN 274 (286)
T ss_dssp GG--------GSSSCHHHHHHHHTTSSCEEEECCCSSCHHHHHHHHHHHHHHCC
T ss_pred cC--------CCcCCHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHHHHHHHhcC
Confidence 22 5789999999999863 2 221 112 345666666666554
No 233
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=89.83 E-value=3.3 Score=41.02 Aligned_cols=118 Identities=15% Similarity=0.202 Sum_probs=73.6
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEEEeeecC----------CCC-----CCCCH------------HHHHHHHHHHHHC
Q 012949 263 IEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGC----------PVE-----GAIPP------------SKVAYVAKELHDM 315 (452)
Q Consensus 263 ~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~----------p~~-----~r~d~------------e~l~~~a~~l~~~ 315 (452)
.++.++..+++++.+++.|-++.+-|... |- |-. ....| +.+.+.++.+.++
T Consensus 78 ~d~~~~~~~~~~~~vh~~g~~i~~QL~h~-Gr~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~~i~~~~~aA~~a~~a 156 (338)
T 1z41_A 78 SDEHIEGFAKLTEQVKEQGSKIGIQLAHA-GRKAELEGDIFAPSAIAFDEQSATPVEMSAEKVKETVQEFKQAAARAKEA 156 (338)
T ss_dssp STHHHHHHHHHHHHHHHTTCEEEEEEECC-GGGCCCSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEecCC-CcccCCCCCCcCCCCCCCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHc
Confidence 34556777788888899998877667642 10 000 00112 4567778888999
Q ss_pred CcCEEEEc-------------------CCcCCCc---HHHHHHHHHHHHHhCCCccEEEEeCCC----cCc----HHHHH
Q 012949 316 GCFEISLG-------------------DTIGVGT---PGTVVPMLEAVMAVVPVEKLAVHLHDT----YGQ----SLPNI 365 (452)
Q Consensus 316 Gad~I~L~-------------------DT~G~~~---P~~v~~li~~l~~~~p~~~l~vH~Hnd----~Gl----A~ANa 365 (452)
|.|.|.|- |-.|... +..+.++++++++.+ +.+|.+-.--+ -|. ++.-+
T Consensus 157 GfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v-~~pv~vris~~~~~~~g~~~~~~~~~a 235 (338)
T 1z41_A 157 GFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVW-DGPLFVRVSASDYTDKGLDIADHIGFA 235 (338)
T ss_dssp TCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSCEEEEEECCCCSTTSCCHHHHHHHH
T ss_pred CCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHc-CCcEEEEecCcccCCCCCCHHHHHHHH
Confidence 99988763 2333322 345789999999988 55677764211 133 23333
Q ss_pred HHHHHcCCCEEeecccC
Q 012949 366 LISLQMGISTVDCSVAG 382 (452)
Q Consensus 366 LaAl~aGa~~VD~Sv~G 382 (452)
...-++|+++|+.+-..
T Consensus 236 ~~l~~~Gvd~i~v~~~~ 252 (338)
T 1z41_A 236 KWMKEQGVDLIDCSSGA 252 (338)
T ss_dssp HHHHHTTCCEEEEECCC
T ss_pred HHHHHcCCCEEEEecCc
Confidence 44457999999997643
No 234
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=89.83 E-value=7.4 Score=39.64 Aligned_cols=143 Identities=13% Similarity=0.055 Sum_probs=88.1
Q ss_pred HhHHHHHHcCCCEEEEEecC--------ChHH--HhhhcCCCHHHHHHHHHHHHHHHHhC-C-CcEEEEEEeeecCC-CC
Q 012949 231 QGFEAAIAAGAKEVAIFASA--------SEAF--SKSNINCSIEDSLVRYRAVAHAAKVL-S-IPVRGYVSCVVGCP-VE 297 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~--------Sd~~--~~~~~~~s~e~~l~~~~~~v~~Ak~~-G-~~V~~~l~~~~g~p-~~ 297 (452)
+..++|.++|.|.|.|-.+- |+.. ....+|-|.++=.+.+.++++.+|+. | ..|.+-|+..-... ..
T Consensus 175 ~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls~~~~~~g~~ 254 (402)
T 2hsa_B 175 RSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAIDHLDAM 254 (402)
T ss_dssp HHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECSSCCSTTCC
T ss_pred HHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEeccccccCCCC
Confidence 35567778999999987641 3332 22346778887778888888888764 4 25554454310000 01
Q ss_pred CCCCHHHHHHHHHHHHHCC------cCEEEEcCCc--C-CCc-------HHHHHHHHHHHHHhCCCccEEEEeCCCcCcH
Q 012949 298 GAIPPSKVAYVAKELHDMG------CFEISLGDTI--G-VGT-------PGTVVPMLEAVMAVVPVEKLAVHLHDTYGQS 361 (452)
Q Consensus 298 ~r~d~e~l~~~a~~l~~~G------ad~I~L~DT~--G-~~~-------P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA 361 (452)
...+.+...++++.+.++| ++.|.+..-. + ... +..-.++++.+++.++. +|..=. .+ -
T Consensus 255 ~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~~i-Pvi~~G--~i--~ 329 (402)
T 2hsa_B 255 DSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAYQG-TFICSG--GY--T 329 (402)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHCSS-CEEEES--SC--C
T ss_pred CCCCHHHHHHHHHHHHhcCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHHHHCCC-CEEEeC--CC--C
Confidence 2234577889999999999 9988884311 0 001 21235678888988864 443321 22 2
Q ss_pred HHHHHHHHHcC-CCEEee
Q 012949 362 LPNILISLQMG-ISTVDC 378 (452)
Q Consensus 362 ~ANaLaAl~aG-a~~VD~ 378 (452)
...+..+++.| ||.|-.
T Consensus 330 ~~~a~~~l~~g~aD~V~i 347 (402)
T 2hsa_B 330 RELGIEAVAQGDADLVSY 347 (402)
T ss_dssp HHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHHHCCCCceeee
Confidence 56778889988 887654
No 235
>1xim_A D-xylose isomerase; isomerase(intramolecular oxidoreductse); HET: XYL; 2.20A {Actinoplanes missouriensis} SCOP: c.1.15.3 PDB: 4xim_A 5xim_A* 6xim_A* 7xim_A 8xim_A* 9xim_A* 3xin_A 2xim_A* 5xin_A* 1xin_A* 1bhw_A* 2xin_A* 3xim_A*
Probab=89.82 E-value=1.9 Score=43.37 Aligned_cols=123 Identities=10% Similarity=0.017 Sum_probs=60.4
Q ss_pred HHhHHHHHHcCCCEEEEEecCChHHHhhhcCCC----HHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCC--CCCCCHH
Q 012949 230 LQGFEAAIAAGAKEVAIFASASEAFSKSNINCS----IEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPV--EGAIPPS 303 (452)
Q Consensus 230 ~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s----~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~--~~r~d~e 303 (452)
++.++.|.+.|++.|.+....... ....+.+ .+...+.+.++.++|++.|+.|+..|...-..|. ..-.+.+
T Consensus 119 ~~~i~~A~~LGa~~vv~~~G~~g~--~~~~~~~~~~~~~~~~e~L~~l~~~A~~~g~gv~l~lE~~~~~~~~~~~~~t~~ 196 (393)
T 1xim_A 119 LRQMDLGAELGAKTLVLWGGREGA--EYDSAKDVSAALDRYREALNLLAQYSEDRGYGLRFAIEPKPNEPRGDILLPTAG 196 (393)
T ss_dssp HHHHHHHHHHTCCEEEEECTTSEE--SSGGGCCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCSSSSSSEESSCSHH
T ss_pred HHHHHHHHHhCCCEEEECCCCCCC--cCCccCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEecCCCCCCCCCcCCCHH
Confidence 357788888999999876541100 0001123 3455666667788898884334444553210010 0112444
Q ss_pred HHHHHHHHHHHCCcCE-E-EEcCCcCCCcH-HHHHHHHHHHHHhCCCccEEEEeCCCcC
Q 012949 304 KVAYVAKELHDMGCFE-I-SLGDTIGVGTP-GTVVPMLEAVMAVVPVEKLAVHLHDTYG 359 (452)
Q Consensus 304 ~l~~~a~~l~~~Gad~-I-~L~DT~G~~~P-~~v~~li~~l~~~~p~~~l~vH~Hnd~G 359 (452)
.+.+++ .+.+.+. + ..-|+.=...+ ..+.+.++.+... +- ...+|++|..|
T Consensus 197 ~~~~ll---~~v~~~~~vgl~lD~gH~~~~g~d~~~~l~~~~~~-~~-i~~vHl~D~~~ 250 (393)
T 1xim_A 197 HAIAFV---QELERPELFGINPETGHEQMSNLNFTQGIAQALWH-KK-LFHIDLNGQHG 250 (393)
T ss_dssp HHHHHH---TTSSSGGGEEECCBHHHHHTTTCCHHHHHHHHHHH-TC-BCCCEECBCCS
T ss_pred HHHHHH---HHhCCccceEEEEccCCccccCCCHHHHHHHhhhc-CC-EEEEEeCCCCC
Confidence 444444 4455433 3 33476322121 2234445554411 22 35689988743
No 236
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=89.79 E-value=3.7 Score=39.64 Aligned_cols=135 Identities=12% Similarity=0.047 Sum_probs=83.3
Q ss_pred EEeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCcC---CCcHHHHHHHHHHHHHhCC--Ccc----EEEEeCCCc
Q 012949 288 VSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIG---VGTPGTVVPMLEAVMAVVP--VEK----LAVHLHDTY 358 (452)
Q Consensus 288 l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G---~~~P~~v~~li~~l~~~~p--~~~----l~vH~Hnd~ 358 (452)
|+.+.|+|.. ..+.+.-+.-++.+.+.||+.|-+.=-+| ...-..+.+-|+.+++..+ +.+ |+...=+|.
T Consensus 71 v~tVigFP~G-~~~~~~Kv~E~~~Av~~GAdEIDmVinig~l~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~d~ 149 (260)
T 1p1x_A 71 IATVTNFPHG-NDDIDIALAETRAAIAYGADEVDVVFPYRALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGELKDE 149 (260)
T ss_dssp EEEEESTTTC-CSCHHHHHHHHHHHHHHTCSEEEEECCHHHHHTTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHHHCSH
T ss_pred EEEEeCCCCC-CCcHHHHHHHHHHHHHcCCCEEEEeccHHhhhCCCHHHHHHHHHHHHHHhcccCCeEEEEEecccCCcH
Confidence 3445667754 45666666677888889999998877777 4445677777888877542 122 222222343
Q ss_pred CcHHHHHHHHHHcCCCEEeecccCCCCCCCCCCCCCcccHHHHHHHHHc-----CCCCC------CCC-hhhHHHHHHHH
Q 012949 359 GQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSG-----LGVET------NVD-LRKLMLAGDFI 426 (452)
Q Consensus 359 GlA~ANaLaAl~aGa~~VD~Sv~GlGecP~a~graGNaalE~vv~~L~~-----~Gi~t------~iD-l~~L~~la~~v 426 (452)
..=...+..|+++|||+|=+|- |. .+|++..|++..+.+. .|-.. ||. ++...+..+.-
T Consensus 150 e~i~~a~~ia~eaGADfVKTST-Gf--------~~~gAt~e~v~lm~~~I~~~~~g~~v~VKaaGGIrt~~~al~~i~ag 220 (260)
T 1p1x_A 150 ALIRKASEISIKAGADFIKTST-GK--------VAVNATPESARIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYLAIA 220 (260)
T ss_dssp HHHHHHHHHHHHTTCSEEECCC-SC--------SSCCCCHHHHHHHHHHHHHHTCTTTCEEECBSSCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEeCC-CC--------CCCCCCHHHHHHHHHHHHHhcCCCCceEEEeCCCCCHHHHHHHHHhh
Confidence 3223567788999999999885 22 2367888977766654 22222 233 44555555555
Q ss_pred HHHhCC
Q 012949 427 NKHLGR 432 (452)
Q Consensus 427 ~~~~g~ 432 (452)
.+.+|.
T Consensus 221 a~~lG~ 226 (260)
T 1p1x_A 221 DELFGA 226 (260)
T ss_dssp HHHHCT
T ss_pred hhhccc
Confidence 555554
No 237
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=89.71 E-value=4.4 Score=39.15 Aligned_cols=149 Identities=12% Similarity=0.124 Sum_probs=84.4
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHh------h-----hcCCCHHHHHHHHHHHHHHHHhC--CCcEEEEEEeeecCCCC
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSK------S-----NINCSIEDSLVRYRAVAHAAKVL--SIPVRGYVSCVVGCPVE 297 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~------~-----~~~~s~e~~l~~~~~~v~~Ak~~--G~~V~~~l~~~~g~p~~ 297 (452)
+.++.+.++|+|.|.+-++-||.... . +.|.+.++.+ +.++..|+. .+++. ++.
T Consensus 36 ~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~----~~v~~ir~~~~~~Piv--lm~------- 102 (267)
T 3vnd_A 36 KIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCF----DIITKVRAQHPDMPIG--LLL------- 102 (267)
T ss_dssp HHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHH----HHHHHHHHHCTTCCEE--EEE-------
T ss_pred HHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHH----HHHHHHHhcCCCCCEE--EEe-------
Confidence 46777888999999999888773221 1 1344444444 455666654 44543 331
Q ss_pred CCCCHHH---HHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCC
Q 012949 298 GAIPPSK---VAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGIS 374 (452)
Q Consensus 298 ~r~d~e~---l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~ 374 (452)
.++|-+ +.++++.+.++|+|.+.++|- .|++..++++.+++. .. .+.+=.=.+.-. .-.....+.+-.
T Consensus 103 -Y~npv~~~g~e~f~~~~~~aGvdgvii~Dl----p~ee~~~~~~~~~~~-gl-~~i~liaP~t~~--eri~~i~~~~~g 173 (267)
T 3vnd_A 103 -YANLVFANGIDEFYTKAQAAGVDSVLIADV----PVEESAPFSKAAKAH-GI-APIFIAPPNADA--DTLKMVSEQGEG 173 (267)
T ss_dssp -CHHHHHHHCHHHHHHHHHHHTCCEEEETTS----CGGGCHHHHHHHHHT-TC-EEECEECTTCCH--HHHHHHHHHCCS
T ss_pred -cCcHHHHhhHHHHHHHHHHcCCCEEEeCCC----CHhhHHHHHHHHHHc-CC-eEEEEECCCCCH--HHHHHHHHhCCC
Confidence 112311 356888889999999999994 677888888888774 22 222222222222 233333344444
Q ss_pred EEee-cccC-CCCCCCCCCCCCc-ccHHHHHHHHHc
Q 012949 375 TVDC-SVAG-LGGCPYAKGASGN-VATEDVVYMLSG 407 (452)
Q Consensus 375 ~VD~-Sv~G-lGecP~a~graGN-aalE~vv~~L~~ 407 (452)
.|-. |+.| -|. +.+. ..+.+++..++.
T Consensus 174 fvY~vS~~GvTG~------~~~~~~~~~~~v~~vr~ 203 (267)
T 3vnd_A 174 YTYLLSRAGVTGT------ESKAGEPIENILTQLAE 203 (267)
T ss_dssp CEEESCCCCCC--------------CHHHHHHHHHT
T ss_pred cEEEEecCCCCCC------ccCCcHHHHHHHHHHHH
Confidence 5655 6666 455 5443 347788888776
No 238
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=89.69 E-value=5.2 Score=43.02 Aligned_cols=142 Identities=15% Similarity=0.095 Sum_probs=89.2
Q ss_pred HhHHHHHHcCCCEEEEEecC--------ChHH--HhhhcCCCHHHHHHHHHHHHHHHHhC---CCcEEEEEEeeecCCCC
Q 012949 231 QGFEAAIAAGAKEVAIFASA--------SEAF--SKSNINCSIEDSLVRYRAVAHAAKVL---SIPVRGYVSCVVGCPVE 297 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~--------Sd~~--~~~~~~~s~e~~l~~~~~~v~~Ak~~---G~~V~~~l~~~~g~p~~ 297 (452)
+..+.|.++|.|.|.|-.+- |+.. ....+|-|.++-.+.+.++++.+|+. .+.+.+-|+..- . ..
T Consensus 145 ~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~-~-~~ 222 (671)
T 1ps9_A 145 RCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLD-L-VE 222 (671)
T ss_dssp HHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEEC-C-ST
T ss_pred HHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccc-c-CC
Confidence 35567788999999986532 2221 12235677887788888888888874 345544454321 0 12
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEc----CC----cCCCcH-HHHHHHHHHHHHhCCCccEEEEeCCCcCc-HHHHHHH
Q 012949 298 GAIPPSKVAYVAKELHDMGCFEISLG----DT----IGVGTP-GTVVPMLEAVMAVVPVEKLAVHLHDTYGQ-SLPNILI 367 (452)
Q Consensus 298 ~r~d~e~l~~~a~~l~~~Gad~I~L~----DT----~G~~~P-~~v~~li~~l~~~~p~~~l~vH~Hnd~Gl-A~ANaLa 367 (452)
+..+.+...++++.+.++|+|.|.+. +. .....| ....++++.+++.+.. +|..= -|. -..++..
T Consensus 223 ~g~~~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i-Pvi~~----Ggi~~~~~a~~ 297 (671)
T 1ps9_A 223 DGGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVSL-PLVTT----NRINDPQVADD 297 (671)
T ss_dssp TCCCHHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSCSS-CEEEC----SSCCSHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhcCc-eEEEe----CCCCCHHHHHH
Confidence 34578889999999999999999873 11 000111 2234677888887643 45431 233 4578888
Q ss_pred HHHcC-CCEEeec
Q 012949 368 SLQMG-ISTVDCS 379 (452)
Q Consensus 368 Al~aG-a~~VD~S 379 (452)
+++.| ||.|-..
T Consensus 298 ~l~~g~aD~V~~g 310 (671)
T 1ps9_A 298 ILSRGDADMVSMA 310 (671)
T ss_dssp HHHTTSCSEEEES
T ss_pred HHHcCCCCEEEeC
Confidence 99998 8887543
No 239
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=89.66 E-value=5.5 Score=38.55 Aligned_cols=104 Identities=17% Similarity=0.282 Sum_probs=68.4
Q ss_pred HHHHHHHHHHhCCCc-EEEEEEeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCc-------------------CC
Q 012949 269 RYRAVAHAAKVLSIP-VRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTI-------------------GV 328 (452)
Q Consensus 269 ~~~~~v~~Ak~~G~~-V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~-------------------G~ 328 (452)
++.+..+.+|+.|-+ ...||+ ++--+.+...++++.+.+.|||.|.|.=-. ..
T Consensus 6 ri~~~f~~~~~~~~~ali~yi~-------aGdP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G 78 (271)
T 3nav_A 6 RYQALFQRLSAAQQGAFVPFVT-------IGDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAK 78 (271)
T ss_dssp HHHHHHHHHHHTTBCEEEEEEE-------TTSSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCCCeEEEEEe-------CCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcC
Confidence 345666777777755 345554 233467889999999999999977765221 12
Q ss_pred CcHHHHHHHHHHHHHhCCCccEEEEeCCC--cCcHHHH-HHHHHHcCCCEEeec
Q 012949 329 GTPGTVVPMLEAVMAVVPVEKLAVHLHDT--YGQSLPN-ILISLQMGISTVDCS 379 (452)
Q Consensus 329 ~~P~~v~~li~~l~~~~p~~~l~vH~Hnd--~GlA~AN-aLaAl~aGa~~VD~S 379 (452)
.+..++-++++.+|+..+.+||.+-..-+ +..++.+ +..+.++|++.+=..
T Consensus 79 ~~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIip 132 (271)
T 3nav_A 79 TTPDICFELIAQIRARNPETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLIA 132 (271)
T ss_dssp CCHHHHHHHHHHHHHHCTTSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEET
T ss_pred CCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEEC
Confidence 34456778999999886666777765433 3333443 555668999976554
No 240
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=89.66 E-value=15 Score=37.11 Aligned_cols=141 Identities=12% Similarity=0.032 Sum_probs=93.6
Q ss_pred HHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHH-hCCCcEEEEEEeeecCCCCCCCCHHHHHHH
Q 012949 230 LQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAK-VLSIPVRGYVSCVVGCPVEGAIPPSKVAYV 308 (452)
Q Consensus 230 ~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak-~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~ 308 (452)
.+-++.+.+-|+..+-+... +.+....-|.+.+++++.+.+.++.++ +.|+.++.-++.. -..+++...++
T Consensus 99 ~e~~ed~a~dgV~Y~Eirf~--P~~~~~~~Gl~~~~vv~av~~g~~~a~~~~gi~~rlI~~~~------R~~~~e~a~~~ 170 (380)
T 4gxw_A 99 YEYLEDAAAHNVRHAEFFWN--PTGTVRVSGIPYADAQAAIVTGMRDAARDFGIGARLIPSID------REQDPDEAVAI 170 (380)
T ss_dssp HHHHHHHHTTTEEEEEEEEC--HHHHHHTTCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEE------TTSCHHHHHHH
T ss_pred HHHHHHHHHCCCeEEEEEcC--HHHhccccCCCHHHHHHHHHHHHHHHHHhcCCcEEEEEeec------CCCCHHHHHHH
Confidence 34667777889888887764 333222357899999999888877665 5798887544431 12467777777
Q ss_pred HHHHHHC---CcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHH-cCCCEEeeccc
Q 012949 309 AKELHDM---GCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQ-MGISTVDCSVA 381 (452)
Q Consensus 309 a~~l~~~---Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~-aGa~~VD~Sv~ 381 (452)
++.+.++ |+-.|-|+-.=-...|....+.++..++. +.++.+|+=..-| ...|...|++ .|+++|+=.+.
T Consensus 171 ~~~a~~~~~~~VvG~dL~g~E~~~p~~~f~~~f~~ar~~--Gl~~t~HAGE~~~-p~~~i~~al~~lga~RIgHG~~ 244 (380)
T 4gxw_A 171 VDWMKANRADEVAGIGIDYRENDRPPELFWKAYRDARAA--GFRTTAHAGEFGM-PWRNVETAVDLLHVDRVDHGYT 244 (380)
T ss_dssp HHHHHHTCCTTBCEEEEESCCTTCCGGGGHHHHHHHHHT--TCEEEEEESCTTC-CHHHHHHHHHTSCCSEEEECGG
T ss_pred HHHHHHhCCCCEEEEeecCCCCCCCHHHHHHHHHHHHHc--CCCeeeeccccCC-chHHHHHHHHHcCCccccccee
Confidence 7776665 34455554322234567777888877763 4688999976433 3467888886 79999975444
No 241
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=89.64 E-value=1 Score=44.77 Aligned_cols=79 Identities=15% Similarity=0.181 Sum_probs=52.0
Q ss_pred CCCC-CCHHHHHHHHHHHHHCCcCEEEEcC-C----cCCCcHHHHHHH---HHHHHHhCCCccEEEEeCCCcCcHHHHHH
Q 012949 296 VEGA-IPPSKVAYVAKELHDMGCFEISLGD-T----IGVGTPGTVVPM---LEAVMAVVPVEKLAVHLHDTYGQSLPNIL 366 (452)
Q Consensus 296 ~~~r-~d~e~l~~~a~~l~~~Gad~I~L~D-T----~G~~~P~~v~~l---i~~l~~~~p~~~l~vH~Hnd~GlA~ANaL 366 (452)
|.++ .+.+.+.+.++++.+.|||.|-+.= + ..+...+++.++ |+.+++++|+++|.+ |++--. -+.
T Consensus 57 dgg~~~~~~~a~~~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~~~vpISI---DT~~~~--Vae 131 (318)
T 2vp8_A 57 DKGATFSDAAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPDQLISV---DTWRAQ--VAK 131 (318)
T ss_dssp -------CHHHHHHHHHHHHTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHSTTCEEEE---ECSCHH--HHH
T ss_pred CCCccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCeEEE---eCCCHH--HHH
Confidence 3444 3678899999999999999998872 2 223334555444 777788887778888 555544 456
Q ss_pred HHHHcCCCEEeec
Q 012949 367 ISLQMGISTVDCS 379 (452)
Q Consensus 367 aAl~aGa~~VD~S 379 (452)
+|+++|+++|+-.
T Consensus 132 aAl~aGa~iINDV 144 (318)
T 2vp8_A 132 AACAAGADLINDT 144 (318)
T ss_dssp HHHHHTCCEEEET
T ss_pred HHHHhCCCEEEEC
Confidence 8889999998643
No 242
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=89.61 E-value=1.7 Score=43.26 Aligned_cols=117 Identities=16% Similarity=0.202 Sum_probs=82.1
Q ss_pred HHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHHHHHHCCcC-EEEEcC-CcCCCcHHHHHHHHHHHHHhCCC
Q 012949 270 YRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCF-EISLGD-TIGVGTPGTVVPMLEAVMAVVPV 347 (452)
Q Consensus 270 ~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad-~I~L~D-T~G~~~P~~v~~li~~l~~~~p~ 347 (452)
++++.+.|++.|+-|-+ |. -.+.+.+..+.+.+.+.+.. +|.+.- +..++....+..++....+.++.
T Consensus 6 ~~~ll~~A~~~~yAV~A-----fN-----v~n~e~~~Ail~AAee~~sPvIlq~s~g~~~y~g~~~~~~~v~~aa~~~~~ 75 (323)
T 2isw_A 6 LRQMLGEARKHKYGVGA-----FN-----VNNMEQIQGIMKAVVQLKSPVILQCSRGALKYSDMIYLKKLCEAALEKHPD 75 (323)
T ss_dssp HHHHHHHHHHTTCCEEE-----EE-----CCSHHHHHHHHHHHHHTTCCEEEEEEHHHHHHTTTHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHCCceEEE-----Ee-----eCCHHHHHHHHHHHHHhCCCEEEECChhHHHhCCHHHHHHHHHHHHHhcCC
Confidence 35777999999988742 21 23578888999999999876 444432 22233346667888888887566
Q ss_pred ccEEEEeCCCcCcHHHHHHHHHHcCCC--EEeecccCCCCCCCCCCCCCc-ccHHHHHHHHHc
Q 012949 348 EKLAVHLHDTYGQSLPNILISLQMGIS--TVDCSVAGLGGCPYAKGASGN-VATEDVVYMLSG 407 (452)
Q Consensus 348 ~~l~vH~Hnd~GlA~ANaLaAl~aGa~--~VD~Sv~GlGecP~a~graGN-aalE~vv~~L~~ 407 (452)
+|+.+|. |.|........|+++|.+ ++|+|-..+-+ | .-|.+++.+.+.
T Consensus 76 VPValHl--DHg~~~e~i~~ai~~GFtSVMiDgS~~p~eE---------Ni~~Tk~vv~~ah~ 127 (323)
T 2isw_A 76 IPICIHL--DHGDTLESVKMAIDLGFSSVMIDASHHPFDE---------NVRITKEVVAYAHA 127 (323)
T ss_dssp SCEEEEE--EEECSHHHHHHHHHTTCSEEEECCTTSCHHH---------HHHHHHHHHHHHHT
T ss_pred CcEEEEC--CCCCCHHHHHHHHHcCCCeEEecCCCCCHHH---------HHHHHHHHHHHHHH
Confidence 6777766 556667889999999998 77999776655 4 445666666654
No 243
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=89.29 E-value=10 Score=34.90 Aligned_cols=124 Identities=15% Similarity=0.116 Sum_probs=74.2
Q ss_pred HhHHHHHHcCCCEEEEEecCC--hHHHhh--hcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASAS--EAFSKS--NINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVA 306 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~S--d~~~~~--~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~ 306 (452)
+.++.+.++|.+.|-++.... ..|... ....+. +.+.++.+.+++.|+++.. +.. + . ....+.+.
T Consensus 26 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~gl~i~~-~~~-~---~--~~~~~~~~ 94 (262)
T 3p6l_A 26 EALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDA----QTQKEIKELAASKGIKIVG-TGV-Y---V--AEKSSDWE 94 (262)
T ss_dssp HHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCH----HHHHHHHHHHHHTTCEEEE-EEE-E---C--CSSTTHHH
T ss_pred HHHHHHHHcCCCEEeecCCcccccccccccccccCCH----HHHHHHHHHHHHcCCeEEE-Eec-c---C--CccHHHHH
Confidence 478899999999999975311 000000 011222 2345666788899998753 221 1 1 12457888
Q ss_pred HHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCc--HHHHHHHHHHcC
Q 012949 307 YVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQ--SLPNILISLQMG 372 (452)
Q Consensus 307 ~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~Gl--A~ANaLaAl~aG 372 (452)
+.++.+.++|++.|.+.- | ++...++.+..++ .+ +.|.+|.|...-. -....+..++.+
T Consensus 95 ~~i~~A~~lGa~~v~~~~--~---~~~~~~l~~~a~~-~g-v~l~~En~~~~~~~~~~~~~~~ll~~~ 155 (262)
T 3p6l_A 95 KMFKFAKAMDLEFITCEP--A---LSDWDLVEKLSKQ-YN-IKISVHNHPQPSDYWKPENLLKAISGR 155 (262)
T ss_dssp HHHHHHHHTTCSEEEECC--C---GGGHHHHHHHHHH-HT-CEEEEECCSSSSSSSSHHHHHHHHTTS
T ss_pred HHHHHHHHcCCCEEEecC--C---HHHHHHHHHHHHH-hC-CEEEEEeCCCccccCCHHHHHHHHHhC
Confidence 899999999999999862 2 3455555554433 44 5799999976432 223444444433
No 244
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=89.27 E-value=1.1 Score=44.21 Aligned_cols=81 Identities=12% Similarity=-0.013 Sum_probs=69.4
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCcC---CCcHHHHHHHHHHHHHhCC-CccEEEEe-CCCcCcHHHHHHHHHHcC
Q 012949 298 GAIPPSKVAYVAKELHDMGCFEISLGDTIG---VGTPGTVVPMLEAVMAVVP-VEKLAVHL-HDTYGQSLPNILISLQMG 372 (452)
Q Consensus 298 ~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G---~~~P~~v~~li~~l~~~~p-~~~l~vH~-Hnd~GlA~ANaLaAl~aG 372 (452)
+..|.+-+.++++.+.+.|++.|.++-|+| .++.++-.++++.+++... .++|-+|. +|+..-++..+..|-++|
T Consensus 27 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~G 106 (318)
T 3qfe_A 27 DTLDLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHINDASVAG 106 (318)
T ss_dssp TEECHHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECCCSSHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcC
Confidence 568999999999999999999999999999 4788998999998888763 35666665 678888999999999999
Q ss_pred CCEEee
Q 012949 373 ISTVDC 378 (452)
Q Consensus 373 a~~VD~ 378 (452)
||.+=.
T Consensus 107 adavlv 112 (318)
T 3qfe_A 107 ANYVLV 112 (318)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 997755
No 245
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=89.21 E-value=1.3 Score=43.51 Aligned_cols=82 Identities=13% Similarity=0.075 Sum_probs=70.8
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCcC---CCcHHHHHHHHHHHHHhCC-CccEEEE-eCCCcCcHHHHHHHHHHcC
Q 012949 298 GAIPPSKVAYVAKELHDMGCFEISLGDTIG---VGTPGTVVPMLEAVMAVVP-VEKLAVH-LHDTYGQSLPNILISLQMG 372 (452)
Q Consensus 298 ~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G---~~~P~~v~~li~~l~~~~p-~~~l~vH-~Hnd~GlA~ANaLaAl~aG 372 (452)
+..|.+.+.++++.+.+.|++.|.++-|+| .+++++-.++++.+++... .++|-+| .+++..-++..+..|-++|
T Consensus 24 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~G 103 (309)
T 3fkr_A 24 GDLDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLRAQQLG 103 (309)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCchHHHHHHHHHHHHHcC
Confidence 578999999999999999999999999999 5788888899998888753 4678787 5788889999999999999
Q ss_pred CCEEeec
Q 012949 373 ISTVDCS 379 (452)
Q Consensus 373 a~~VD~S 379 (452)
|+.+=..
T Consensus 104 adavlv~ 110 (309)
T 3fkr_A 104 AAMVMAM 110 (309)
T ss_dssp CSEEEEC
T ss_pred CCEEEEc
Confidence 9977654
No 246
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=89.19 E-value=7 Score=39.20 Aligned_cols=120 Identities=15% Similarity=0.163 Sum_probs=76.7
Q ss_pred CHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecC--------------CC-----C---------------CCCCH-----
Q 012949 262 SIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGC--------------PV-----E---------------GAIPP----- 302 (452)
Q Consensus 262 s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~--------------p~-----~---------------~r~d~----- 302 (452)
..++.++..+++++.+++.|-++.+-|... |- |- . ....|
T Consensus 75 ~~d~~i~~~~~l~~~vh~~g~~i~~QL~H~-Gr~~~~~~~~g~~~~apS~i~~~~~~~~~~~~~g~~~~~~~~~p~~mt~ 153 (365)
T 2gou_A 75 YTPEQIAGWRIVTEAVHAKGCAIFAQLWHV-GRVTHPDNIDGQQPISSSTLKAENVKVFVDNGSDEPGFVDVAVPRAMTK 153 (365)
T ss_dssp SSHHHHHHHHHHHHHHHHHSCEEEEEEECC-TTSSCGGGTTTCCCEESSSCCCTTCEEEECCSSSSCEEEECCCCEECCH
T ss_pred CCHHHHHHHHHHHHHHHhcCCeEEEEeecC-CCcccccccCCCCccCCCCccccccccccccccccccccCCCCCCcCCH
Confidence 345667778888888899998877667641 10 00 0 00123
Q ss_pred -------HHHHHHHHHHHHCCcCEEEE-------------------cCCcCCCc---HHHHHHHHHHHHHhCCCccEEEE
Q 012949 303 -------SKVAYVAKELHDMGCFEISL-------------------GDTIGVGT---PGTVVPMLEAVMAVVPVEKLAVH 353 (452)
Q Consensus 303 -------e~l~~~a~~l~~~Gad~I~L-------------------~DT~G~~~---P~~v~~li~~l~~~~p~~~l~vH 353 (452)
+.+++.|+.+.++|+|.|-| .|-.|... +.-+.++|+++++.++..+|.+-
T Consensus 154 ~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vr 233 (365)
T 2gou_A 154 ADIAQVIADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVR 233 (365)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEE
Confidence 56777888889999999988 34444432 23477889999998863378874
Q ss_pred eCC--C-----cCcHH----HHHHHHHHcCCCEEeecccC
Q 012949 354 LHD--T-----YGQSL----PNILISLQMGISTVDCSVAG 382 (452)
Q Consensus 354 ~Hn--d-----~GlA~----ANaLaAl~aGa~~VD~Sv~G 382 (452)
..- . -|... .-+.++-++|+++|+.+-..
T Consensus 234 is~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~ 273 (365)
T 2gou_A 234 LAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEVD 273 (365)
T ss_dssp ECSSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCB
T ss_pred EccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 432 1 12332 23445557999999998643
No 247
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=89.11 E-value=1.2 Score=43.06 Aligned_cols=195 Identities=17% Similarity=0.195 Sum_probs=98.9
Q ss_pred HHHHHHHHCCCCEEEEecC-CCCCcccccCCHHHHHHHHHhccCCceeEEecchhhhhhhhhhhhhccchhhhhhhhccH
Q 012949 152 ELIRRLVSSGLPVVEATSF-VSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLWVYL 230 (452)
Q Consensus 152 ~i~~~L~~~Gv~~IEvG~~-~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~~~~ 230 (452)
.+.+.+..+|-+.+-+..- ++. .|-...+.+++.++. .++. +.||.. -.+..++.++
T Consensus 34 ~~~~a~~asg~e~vtva~rR~~~---~~~~~~~~~~~~i~~---~~~~-~lpNTa--------g~~ta~eAv~------- 91 (265)
T 1wv2_A 34 ETRRAIEASGAEIVTVAVRRTNI---GQNPDEPNLLDVIPP---DRYT-ILPNTA--------GCYDAVEAVR------- 91 (265)
T ss_dssp HHHHHHHHSCCSEEEEEGGGCCC----------------CT---TTSE-EEEECT--------TCCSHHHHHH-------
T ss_pred HHHHHHHHhCCCeEEEEEEeecc---ccCCCcchHHhhhhh---cCCE-ECCcCC--------CCCCHHHHHH-------
Confidence 4567788999999998753 111 000122456666642 1222 345543 1112222221
Q ss_pred HhHHHHHH--cCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHH
Q 012949 231 QGFEAAIA--AGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYV 308 (452)
Q Consensus 231 ~~ie~a~~--~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~ 308 (452)
..+.|.+ .|.++|.+.+-..+.... -+..+.+ ++.+..++.|++|..|.. + | ..+
T Consensus 92 -~a~lare~~~~~~~iKlEv~~d~~~ll----pD~~~tv----~aa~~L~~~Gf~Vlpy~~------d----d----~~~ 148 (265)
T 1wv2_A 92 -TCRLARELLDGHNLVKLEVLADQKTLF----PNVVETL----KAAEQLVKDGFDVMVYTS------D----D----PII 148 (265)
T ss_dssp -HHHHHHTTTTSCCEEEECCBSCTTTCC----BCHHHHH----HHHHHHHTTTCEEEEEEC------S----C----HHH
T ss_pred -HHHHHHHHcCCCCeEEEEeecCccccC----cCHHHHH----HHHHHHHHCCCEEEEEeC------C----C----HHH
Confidence 3345555 478899998754332111 1222222 333444556999864332 1 1 258
Q ss_pred HHHHHHCCcCEEEE-cCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHH-HHHHHHHHcCCCE--EeecccCCC
Q 012949 309 AKELHDMGCFEISL-GDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSL-PNILISLQMGIST--VDCSVAGLG 384 (452)
Q Consensus 309 a~~l~~~Gad~I~L-~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~-ANaLaAl~aGa~~--VD~Sv~GlG 384 (452)
++++.++|++.|.- .--+|....-.-.++|+.+++.. .+||-. +-|.++ +-+-.|++.||+. |.+.|.
T Consensus 149 akrl~~~G~~aVmPlg~pIGsG~Gi~~~~lI~~I~e~~-~vPVI~----eGGI~TPsDAa~AmeLGAdgVlVgSAI~--- 220 (265)
T 1wv2_A 149 ARQLAEIGCIAVMPLAGLIGSGLGICNPYNLRIILEEA-KVPVLV----DAGVGTASDAAIAMELGCEAVLMNTAIA--- 220 (265)
T ss_dssp HHHHHHSCCSEEEECSSSTTCCCCCSCHHHHHHHHHHC-SSCBEE----ESCCCSHHHHHHHHHHTCSEEEESHHHH---
T ss_pred HHHHHHhCCCEEEeCCccCCCCCCcCCHHHHHHHHhcC-CCCEEE----eCCCCCHHHHHHHHHcCCCEEEEChHHh---
Confidence 89999999998844 22244442222245556666643 334444 445554 6778899999995 455565
Q ss_pred CCCCCCCCCCccc--HHHHHHHHH
Q 012949 385 GCPYAKGASGNVA--TEDVVYMLS 406 (452)
Q Consensus 385 ecP~a~graGNaa--lE~vv~~L~ 406 (452)
+++++. ++.++.+++
T Consensus 221 -------~a~dP~~ma~af~~Av~ 237 (265)
T 1wv2_A 221 -------HAKDPVMMAEAMKHAIV 237 (265)
T ss_dssp -------TSSSHHHHHHHHHHHHH
T ss_pred -------CCCCHHHHHHHHHHHHH
Confidence 455665 455555443
No 248
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=89.05 E-value=5.1 Score=38.94 Aligned_cols=107 Identities=13% Similarity=0.099 Sum_probs=65.9
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 310 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~ 310 (452)
+.++..++.|++.|-+.-+..|.+ -.|.+|-.+-++.+++.++. .++|.+.+ +..+.+...++++
T Consensus 28 ~lv~~li~~Gv~gl~~~GttGE~~-----~Ls~~Er~~v~~~~~~~~~g-r~pviaGv---------g~~~t~~ai~la~ 92 (294)
T 3b4u_A 28 AHARRCLSNGCDSVTLFGTTGEGC-----SVGSRERQAILSSFIAAGIA-PSRIVTGV---------LVDSIEDAADQSA 92 (294)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGG-----GSCHHHHHHHHHHHHHTTCC-GGGEEEEE---------CCSSHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECccccChh-----hCCHHHHHHHHHHHHHHhCC-CCcEEEeC---------CCccHHHHHHHHH
Confidence 366777889999988887777753 34666666555444444321 23443222 2235567778888
Q ss_pred HHHHCCcCEEEEcCCc-CC-CcHHHHHHHHHHHHHhCC--CccEEE
Q 012949 311 ELHDMGCFEISLGDTI-GV-GTPGTVVPMLEAVMAVVP--VEKLAV 352 (452)
Q Consensus 311 ~l~~~Gad~I~L~DT~-G~-~~P~~v~~li~~l~~~~p--~~~l~v 352 (452)
.+.++|+|.+-+.=.. -- .+++.+.+.++.+.+..| +.||-+
T Consensus 93 ~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~p~~~lPiil 138 (294)
T 3b4u_A 93 EALNAGARNILLAPPSYFKNVSDDGLFAWFSAVFSKIGKDARDILV 138 (294)
T ss_dssp HHHHTTCSEEEECCCCSSCSCCHHHHHHHHHHHHHHHCTTCCCEEE
T ss_pred HHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCCCcEEE
Confidence 8888888866654332 22 366778888888777764 445444
No 249
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=89.04 E-value=14 Score=36.32 Aligned_cols=110 Identities=14% Similarity=0.046 Sum_probs=67.8
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 310 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~ 310 (452)
+.++.+.+.|++.|.+..... .+.++.+|+.|++|...+ .++ +.++
T Consensus 93 ~~~~~~~~~g~d~V~l~~g~p-------------------~~~~~~l~~~g~~v~~~v-----------~s~----~~a~ 138 (326)
T 3bo9_A 93 DLVKVCIEEKVPVVTFGAGNP-------------------TKYIRELKENGTKVIPVV-----------ASD----SLAR 138 (326)
T ss_dssp HHHHHHHHTTCSEEEEESSCC-------------------HHHHHHHHHTTCEEEEEE-----------SSH----HHHH
T ss_pred HHHHHHHHCCCCEEEECCCCc-------------------HHHHHHHHHcCCcEEEEc-----------CCH----HHHH
Confidence 467888999999988754321 133466677888875322 123 3455
Q ss_pred HHHHCCcCEEEEcC--CcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcH-HHHHHHHHHcCCCEEeec
Q 012949 311 ELHDMGCFEISLGD--TIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQS-LPNILISLQMGISTVDCS 379 (452)
Q Consensus 311 ~l~~~Gad~I~L~D--T~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA-~ANaLaAl~aGa~~VD~S 379 (452)
.+.++|+|.|.+-. .-|..-+....++++.+++.+. +||-.= =|.. ..|..+++.+||+.|...
T Consensus 139 ~a~~~GaD~i~v~g~~~GG~~G~~~~~~ll~~i~~~~~-iPviaa----GGI~~~~dv~~al~~GA~gV~vG 205 (326)
T 3bo9_A 139 MVERAGADAVIAEGMESGGHIGEVTTFVLVNKVSRSVN-IPVIAA----GGIADGRGMAAAFALGAEAVQMG 205 (326)
T ss_dssp HHHHTTCSCEEEECTTSSEECCSSCHHHHHHHHHHHCS-SCEEEE----SSCCSHHHHHHHHHHTCSEEEES
T ss_pred HHHHcCCCEEEEECCCCCccCCCccHHHHHHHHHHHcC-CCEEEE----CCCCCHHHHHHHHHhCCCEEEec
Confidence 67789999988843 1121001123366677776653 344432 3665 678888889999987765
No 250
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=89.00 E-value=8 Score=37.84 Aligned_cols=168 Identities=16% Similarity=0.132 Sum_probs=95.0
Q ss_pred HHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHh-CCCcEEEEEEeeecCCCCC--CCCHHH--
Q 012949 230 LQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKV-LSIPVRGYVSCVVGCPVEG--AIPPSK-- 304 (452)
Q Consensus 230 ~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~-~G~~V~~~l~~~~g~p~~~--r~d~e~-- 304 (452)
.+++..|.+.|+++|.+...... =|.|+- . ..++.+++ ..++|. ++. -|-.+ -++.++
T Consensus 49 ~~~a~~A~~gGAdRIELc~~l~~------GGlTPS--~----g~i~~a~~~~~ipV~--vMI---RPRgGdF~Ys~~E~~ 111 (287)
T 3iwp_A 49 VESAVNAERGGADRIELCSGLSE------GGTTPS--M----GVLQVVKQSVQIPVF--VMI---RPRGGDFLYSDREIE 111 (287)
T ss_dssp HHHHHHHHHHTCSEEEECBCGGG------TCBCCC--H----HHHHHHHTTCCSCEE--EEC---CSSSSCSCCCHHHHH
T ss_pred HHHHHHHHHhCCCEEEECCCCCC------CCCCCC--H----HHHHHHHHhcCCCeE--EEE---ecCCCCcccCHHHHH
Confidence 35888999999999999855211 122211 1 22344443 456665 332 23332 345444
Q ss_pred -HHHHHHHHHHCCcCEEEEc--CCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcC-cHHHHHHHHHHcCCCEEeecc
Q 012949 305 -VAYVAKELHDMGCFEISLG--DTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYG-QSLPNILISLQMGISTVDCSV 380 (452)
Q Consensus 305 -l~~~a~~l~~~Gad~I~L~--DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~G-lA~ANaLaAl~aGa~~VD~Sv 380 (452)
+.+-++.+.++|+|.|.|. +.-|....+.+.+|++... ..++.||--=|.= -..+..-..++.|+++|=+|=
T Consensus 112 ~M~~dI~~~~~~GAdGvVfG~L~~dg~iD~~~~~~Li~~a~----~l~vTFHRAFD~~~d~~~Ale~Li~lGvdrILTSG 187 (287)
T 3iwp_A 112 VMKADIRLAKLYGADGLVFGALTEDGHIDKELCMSLMAICR----PLPVTFHRAFDMVHDPMAALETLLTLGFERVLTSG 187 (287)
T ss_dssp HHHHHHHHHHHTTCSEEEECCBCTTSCBCHHHHHHHHHHHT----TSCEEECGGGGGCSCHHHHHHHHHHHTCSEEEECT
T ss_pred HHHHHHHHHHHcCCCEEEEeeeCCCCCcCHHHHHHHHHHcC----CCcEEEECchhccCCHHHHHHHHHHcCCCEEECCC
Confidence 4557788999999999987 3557777788888888643 2356666542211 133444444456999997742
Q ss_pred cCCCCCCCCCCCCCcccHHHHHHHHHc-CCC--CCCCChhhHHHHHH
Q 012949 381 AGLGGCPYAKGASGNVATEDVVYMLSG-LGV--ETNVDLRKLMLAGD 424 (452)
Q Consensus 381 ~GlGecP~a~graGNaalE~vv~~L~~-~Gi--~t~iDl~~L~~la~ 424 (452)
. . |-| -.|..-+.+++..... .-+ .-||+.+.+.++.+
T Consensus 188 ~---~-~~a--~~Gl~~Lk~Lv~~a~~rI~ImaGGGV~~~Ni~~l~~ 228 (287)
T 3iwp_A 188 C---D-SSA--LEGLPLIKRLIEQAKGRIVVMPGGGITDRNLQRILE 228 (287)
T ss_dssp T---S-SST--TTTHHHHHHHHHHHTTSSEEEECTTCCTTTHHHHHH
T ss_pred C---C-CCh--HHhHHHHHHHHHHhCCCCEEEECCCcCHHHHHHHHH
Confidence 2 1 111 1344444555443331 111 13788888887655
No 251
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=88.98 E-value=1.9 Score=41.41 Aligned_cols=134 Identities=17% Similarity=0.179 Sum_probs=85.2
Q ss_pred HHHHHHcCCCEEEEEe-cCChHHHhhh-cCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHH
Q 012949 233 FEAAIAAGAKEVAIFA-SASEAFSKSN-INCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 310 (452)
Q Consensus 233 ie~a~~~Gi~~V~i~~-s~Sd~~~~~~-~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~ 310 (452)
...+.++|++.|.+.. +++-.+-..- ...|.++.+...+.+.+.++ ..|.+-+ |...-.++ .+.++
T Consensus 33 A~~~~~aG~dai~vg~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~~~---~pviaD~------~~Gyg~~~---~~~~~ 100 (255)
T 2qiw_A 33 AGLVEEAGFSGLTIGSHPVADATGSSDGENMNFADYMAVVKKITSAVS---IPVSVDV------ESGYGLSP---ADLIA 100 (255)
T ss_dssp HHHHHHTTCSCEEECHHHHHHHTTCCTTTCSCHHHHHHHHHHHHHHCS---SCEEEEC------TTCTTCCH---HHHHH
T ss_pred HHHHHHcCCCEEEEChHHHHHhCCCCCCCCcCHHHHHHHHHHHHhcCC---CCEEecc------CCCcCcHH---HHHHH
Confidence 3455678999888763 3432211111 24678888887766655543 5665333 23222234 67888
Q ss_pred HHHHCCcCEEEEcCCc-----CCCcHHHHHHHHHHHHHhCC--CccEEEEeCCCc------------CcHHHHHHHHHHc
Q 012949 311 ELHDMGCFEISLGDTI-----GVGTPGTVVPMLEAVMAVVP--VEKLAVHLHDTY------------GQSLPNILISLQM 371 (452)
Q Consensus 311 ~l~~~Gad~I~L~DT~-----G~~~P~~v~~li~~l~~~~p--~~~l~vH~Hnd~------------GlA~ANaLaAl~a 371 (452)
++.++|+..|.|-|.. .+..++++.+.|+++++... ++++-+-.|.|. --++.-+.+-.+|
T Consensus 101 ~l~~aGa~gv~iEd~~~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~~~g~~~~~~~~~~ai~ra~a~~eA 180 (255)
T 2qiw_A 101 QILEAGAVGINVEDVVHSEGKRVREAQEHADYIAAARQAADVAGVDVVINGRTDAVKLGADVFEDPMVEAIKRIKLMEQA 180 (255)
T ss_dssp HHHHTTCCEEEECSEEGGGTTEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHHHHCTTTSSSHHHHHHHHHHHHHHH
T ss_pred HHHHcCCcEEEECCCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCeEEEEEechhhccCCcchHHHHHHHHHHHHHHHc
Confidence 8889999999999986 23456778888898887622 234455555552 2456677778889
Q ss_pred CCCEEee
Q 012949 372 GISTVDC 378 (452)
Q Consensus 372 Ga~~VD~ 378 (452)
||+.|=.
T Consensus 181 GAd~i~~ 187 (255)
T 2qiw_A 181 GARSVYP 187 (255)
T ss_dssp TCSEEEE
T ss_pred CCcEEEE
Confidence 9996643
No 252
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=88.98 E-value=1 Score=43.30 Aligned_cols=171 Identities=15% Similarity=0.086 Sum_probs=82.5
Q ss_pred HHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEecchhhhhhhhhhhhhccchhhhhhhhccHHhH
Q 012949 154 IRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLWVYLQGF 233 (452)
Q Consensus 154 ~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~~~~~~i 233 (452)
.+.|.+.|.+.||+|.+-+ . |.-...+.+++.++++ +.. ++||.. ++. ..++. ....
T Consensus 29 ~~~l~~~Gad~ielg~pr~-~--~~g~~~~~~~~~l~~~---~~~-~~pn~~-------~~~-~~~~~--------~~f~ 85 (264)
T 1xm3_A 29 KEAVAVSESDILTFAVRRM-N--IFEASQPNFLEQLDLS---KYT-LLPNTA-------GAS-TAEEA--------VRIA 85 (264)
T ss_dssp HHHHHHHTCSEEEEETTSS-T--TC-------CTTCCGG---GSE-EEEECT-------TCS-SHHHH--------HHHH
T ss_pred HHHHHHcCCeEEEEccccc-c--cCCCCHHHHHHHHHhc---CCe-EcCCcc-------ccC-CHHHH--------HHHH
Confidence 4789999999999997532 1 1001123445555432 222 224322 000 00000 0144
Q ss_pred HHHHHcC-CCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhC---CCcEEEEEEeeecCCCCCCCCHHHHHHHH
Q 012949 234 EAAIAAG-AKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVL---SIPVRGYVSCVVGCPVEGAIPPSKVAYVA 309 (452)
Q Consensus 234 e~a~~~G-i~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~---G~~V~~~l~~~~g~p~~~r~d~e~l~~~a 309 (452)
+.+.++| .+.|.+.+...... .++...+.++.++++ |+.+.. ++ .+ +++ .+
T Consensus 86 ~~a~~agg~~~i~l~i~~d~~~-----------~~~e~~~~~~~a~~~~~~g~~vi~-~~----~~-----~~~----~a 140 (264)
T 1xm3_A 86 RLAKASGLCDMIKVEVIGCSRS-----------LLPDPVETLKASEQLLEEGFIVLP-YT----SD-----DVV----LA 140 (264)
T ss_dssp HHHHHTTCCSSEEECCBCCTTT-----------CCBCHHHHHHHHHHHHHTTCCEEE-EE----CS-----CHH----HH
T ss_pred HHHHHcCCCCeEEEeecCCCcc-----------cccchHHHHHHHHHHHCCCeEEEE-Ec----CC-----CHH----HH
Confidence 5666664 45555533222110 012234556677776 988742 11 11 233 35
Q ss_pred HHHHHCCcCEEEE-cCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcH-HHHHHHHHHcCCCEEe
Q 012949 310 KELHDMGCFEISL-GDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQS-LPNILISLQMGISTVD 377 (452)
Q Consensus 310 ~~l~~~Gad~I~L-~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA-~ANaLaAl~aGa~~VD 377 (452)
+.+.++|++.|.. .-.+|......-.++++.+++.. ++|+.+- .|.. ..++..++++||+.|=
T Consensus 141 ~~~~~~gad~v~~~~~~~Gt~~~~~~~~~l~~i~~~~-~iPviv~----gGI~t~eda~~~~~~GAdgVi 205 (264)
T 1xm3_A 141 RKLEELGVHAIMPGASPIGSGQGILNPLNLSFIIEQA-KVPVIVD----AGIGSPKDAAYAMELGADGVL 205 (264)
T ss_dssp HHHHHHTCSCBEECSSSTTCCCCCSCHHHHHHHHHHC-SSCBEEE----SCCCSHHHHHHHHHTTCSEEE
T ss_pred HHHHHhCCCEEEECCcccCCCCCCCCHHHHHHHHhcC-CCCEEEE----eCCCCHHHHHHHHHcCCCEEE
Confidence 5666778886622 22223211000133566666643 3455554 4775 5788888999999653
No 253
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=88.89 E-value=1.3 Score=41.07 Aligned_cols=72 Identities=15% Similarity=0.206 Sum_probs=51.8
Q ss_pred HHHHHHHHCCcCEEEEcCCcCCCcH--HHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEeecccCCC
Q 012949 307 YVAKELHDMGCFEISLGDTIGVGTP--GTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCSVAGLG 384 (452)
Q Consensus 307 ~~a~~l~~~Gad~I~L~DT~G~~~P--~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~Sv~GlG 384 (452)
+.++.+.++|++.|.+- ..-...| ..+.++++.+++.+|+.++.+-.|+ ...+..++++|+++|..++.|+.
T Consensus 92 ~~i~~~~~~Gad~V~l~-~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~~~~t-----~~ea~~a~~~Gad~i~~~v~g~~ 165 (234)
T 1yxy_A 92 TEVDQLAALNIAVIAMD-CTKRDRHDGLDIASFIRQVKEKYPNQLLMADIST-----FDEGLVAHQAGIDFVGTTLSGYT 165 (234)
T ss_dssp HHHHHHHTTTCSEEEEE-CCSSCCTTCCCHHHHHHHHHHHCTTCEEEEECSS-----HHHHHHHHHTTCSEEECTTTTSS
T ss_pred HHHHHHHHcCCCEEEEc-ccccCCCCCccHHHHHHHHHHhCCCCeEEEeCCC-----HHHHHHHHHcCCCEEeeeccccC
Confidence 45667789999988763 2222234 3567889999998887777776664 34578899999999976777763
No 254
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=88.80 E-value=4.1 Score=38.30 Aligned_cols=220 Identities=10% Similarity=0.045 Sum_probs=107.8
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEe-cchhhhhhhhhhhhhccchhh
Q 012949 144 TVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLT-PNLKVILQRSILFQQCHASVI 222 (452)
Q Consensus 144 ~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~-~~~~~~i~r~~~~~~~~~~~i 222 (452)
.++.++. ++.+.++|++.||+..+ .| +.+++.+.+++ .++++.++. +... . .......+
T Consensus 30 ~~~~~~~---l~~~~~~G~~~vEl~~~-----~~---~~~~~~~~l~~-~gl~~~~~~~~~~~---~-----~~~~~~~~ 89 (301)
T 3cny_A 30 DNNLQQL---LSDIVVAGFQGTEVGGF-----FP---GPEKLNYELKL-RNLEIAGQWFSSYI---I-----RDGIEKAS 89 (301)
T ss_dssp TCCHHHH---HHHHHHHTCCEECCCTT-----CC---CHHHHHHHHHH-TTCEECEEEEEECH---H-----HHHHHHHH
T ss_pred CCCHHHH---HHHHHHhCCCEEEecCC-----CC---CHHHHHHHHHH-CCCeEEEEeccCCC---C-----hhhHHHHH
Confidence 3555554 45566789999999732 23 45666666654 355554431 1100 0 00000001
Q ss_pred hhhhhccHHhHHHHHHcCCCEEEEEecCChH--HHhhh--------cCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeee
Q 012949 223 SSNLWVYLQGFEAAIAAGAKEVAIFASASEA--FSKSN--------INCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVV 292 (452)
Q Consensus 223 ~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~--~~~~~--------~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~ 292 (452)
+ ...+.++.|.+.|++.|.+....... ..... .....+...+.+.++.++|++.|+++. +...
T Consensus 90 ~----~~~~~i~~a~~lG~~~v~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~--lE~~- 162 (301)
T 3cny_A 90 E----AFEKHCQYLKAINAPVAVVSEQTYTIQRSDTANIFKDKPYFTDKEWDEVCKGLNHYGEIAAKYGLKVA--YHHH- 162 (301)
T ss_dssp H----HHHHHHHHHHHTTCCEEEEEECTTCCTTCSSCCTTTCCCCCCHHHHHHHHHHHHHHHHHHHHTTCEEE--EECC-
T ss_pred H----HHHHHHHHHHHcCCCEEEecCCCccccCcccCCcccccccCcHHHHHHHHHHHHHHHHHHHHcCCEEE--EecC-
Confidence 1 12347788889999999886410000 00000 001234566777788899999998754 3321
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHCCcC--EEEEcCCcCCCcHH-HHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHH
Q 012949 293 GCPVEGAIPPSKVAYVAKELHDMGCF--EISLGDTIGVGTPG-TVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISL 369 (452)
Q Consensus 293 g~p~~~r~d~e~l~~~a~~l~~~Gad--~I~L~DT~G~~~P~-~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl 369 (452)
+...-.+++.+.++++. .+.+ .+++ |+.=...-. ...+.++.+ ++-...+|+||..+-..... .
T Consensus 163 --~~~~~~~~~~~~~l~~~---~~~~~vg~~~-D~~h~~~~g~d~~~~l~~~----~~~i~~vHl~D~~~~~~~~~---~ 229 (301)
T 3cny_A 163 --MGTGIQTKEETDRLMAN---TDPKLVGLLY-DTGHIAVSDGDYMALLNAH----IDRVVHVHFKDVRRSKEEEC---R 229 (301)
T ss_dssp --TTSSSCSHHHHHHHHHT---SCTTTCEEEE-EHHHHHHHHSCSHHHHHHH----GGGEEEEEECEECHHHHHHH---H
T ss_pred --CCcccCCHHHHHHHHHh---CCccceeEEe-chHHHHHcCCCHHHHHHHH----HhheeEEEeecCCcchhhhh---h
Confidence 11122356666655543 3432 3444 653221111 122333333 22246789998765322111 1
Q ss_pred HcCCCEEe----ecccCCCCCCCCCCCCCcccHHHHHHHHHcCCCC
Q 012949 370 QMGISTVD----CSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVE 411 (452)
Q Consensus 370 ~aGa~~VD----~Sv~GlGecP~a~graGNaalE~vv~~L~~~Gi~ 411 (452)
..+....+ ..-..+| .|..+...++..|+..|++
T Consensus 230 ~~~~~~~~~~~~~~~~~~G--------~G~id~~~i~~~L~~~gy~ 267 (301)
T 3cny_A 230 AKGLTFQGSFLNGMFTVPG--------DGDLDFKPVYDKLIANNYK 267 (301)
T ss_dssp HHTCCHHHHHHTTCEECTT--------TSSCCCHHHHHHHHHTTCC
T ss_pred hcccchhhHhhcCccccCC--------CCCccHHHHHHHHHhcCCC
Confidence 11100000 0011222 4789999999999986654
No 255
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=88.71 E-value=19 Score=35.29 Aligned_cols=176 Identities=16% Similarity=0.193 Sum_probs=97.7
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCC--HHHHHHHHHhccCCceeEEe----cchhhhhhhhhhhhhc
Q 012949 144 TVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLAD--ARDVMEAVRDLEGARLPVLT----PNLKVILQRSILFQQC 217 (452)
Q Consensus 144 ~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D--~e~v~~~i~~~~~~~l~~l~----~~~~~~i~r~~~~~~~ 217 (452)
.++.+.-.++++.|.+.|++.|-+.--.. -.+.+.+ ..++++.+.+..+-++++++ .+.+
T Consensus 28 ~iD~~~l~~lv~~li~~Gv~gl~v~GtTG--E~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~------------ 93 (318)
T 3qfe_A 28 TLDLASQERYYAYLARSGLTGLVILGTNA--EAFLLTREERAQLIATARKAVGPDFPIMAGVGAHSTR------------ 93 (318)
T ss_dssp EECHHHHHHHHHHHHTTTCSEEEESSGGG--TGGGSCHHHHHHHHHHHHHHHCTTSCEEEECCCSSHH------------
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCcccc--ChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHH------------
Confidence 47999999999999999999877642211 1233322 22333333332232334333 1111
Q ss_pred cchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcC--CCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCC
Q 012949 218 HASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNIN--CSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCP 295 (452)
Q Consensus 218 ~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~--~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p 295 (452)
+ ..+-.+.|.++|+|-+.+..+. + ++ .+.++.++-++.+.+ ..++++..|= .|
T Consensus 94 --~--------ai~la~~a~~~Gadavlv~~P~---y----~~kp~~~~~l~~~f~~ia~---a~~lPiilYn-----~P 148 (318)
T 3qfe_A 94 --Q--------VLEHINDASVAGANYVLVLPPA---Y----FGKATTPPVIKSFFDDVSC---QSPLPVVIYN-----FP 148 (318)
T ss_dssp --H--------HHHHHHHHHHHTCSEEEECCCC---C-------CCCHHHHHHHHHHHHH---HCSSCEEEEE-----CC
T ss_pred --H--------HHHHHHHHHHcCCCEEEEeCCc---c----cCCCCCHHHHHHHHHHHHh---hCCCCEEEEe-----CC
Confidence 1 1234567778999999886552 1 12 245555555544443 3477775432 34
Q ss_pred CC---CCCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEE-EeCCCcCcHHHHHHHHHHc
Q 012949 296 VE---GAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAV-HLHDTYGQSLPNILISLQM 371 (452)
Q Consensus 296 ~~---~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~v-H~Hnd~GlA~ANaLaAl~a 371 (452)
.- ...+++.+.++++. . ...+.++|+.| ...++.++++. ++...+.+ -.+++ ..+.++.+
T Consensus 149 ~~t~g~~l~~~~~~~La~~---~-pnIvgiKdssg--d~~~~~~~~~~----~~~~~f~v~~G~d~------~~l~~l~~ 212 (318)
T 3qfe_A 149 GVCNGIDLDSDMITTIARK---N-PNVVGVKLTCA--SVGKITRLAAT----LPPAAFSVFGGQSD------FLIGGLSV 212 (318)
T ss_dssp C----CCCCHHHHHHHHHH---C-TTEEEEEESSC--CHHHHHHHHHH----SCGGGCEEEESCGG------GHHHHHHT
T ss_pred cccCCCCCCHHHHHHHHhh---C-CCEEEEEeCCC--CHHHHHHHHHh----cCCCCEEEEEecHH------HHHHHHHC
Confidence 32 23567777666542 3 47999999988 34555555443 33223544 44443 24578889
Q ss_pred CCC
Q 012949 372 GIS 374 (452)
Q Consensus 372 Ga~ 374 (452)
|++
T Consensus 213 G~~ 215 (318)
T 3qfe_A 213 GSA 215 (318)
T ss_dssp TCC
T ss_pred CCC
Confidence 986
No 256
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=88.70 E-value=3.5 Score=40.81 Aligned_cols=93 Identities=11% Similarity=0.090 Sum_probs=64.0
Q ss_pred HHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHHHHHHCC--cCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCcc
Q 012949 272 AVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMG--CFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEK 349 (452)
Q Consensus 272 ~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~G--ad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~ 349 (452)
+.++.+++.|+.+.+. +| .+++.+ +.++.+.++| ++.|.+ |+ +...|....+.|+.+++.+|..+
T Consensus 85 ~~i~~~~~~g~~v~v~----~g------~~~~~~-~~a~~~~~~g~~~~~i~i-~~-~~G~~~~~~~~i~~lr~~~~~~~ 151 (336)
T 1ypf_A 85 SFIRDMQSRGLIASIS----VG------VKEDEY-EFVQQLAAEHLTPEYITI-DI-AHGHSNAVINMIQHIKKHLPESF 151 (336)
T ss_dssp HHHHHHHHTTCCCEEE----EC------CSHHHH-HHHHHHHHTTCCCSEEEE-EC-SSCCSHHHHHHHHHHHHHCTTSE
T ss_pred HHHHHHHhcCCeEEEe----CC------CCHHHH-HHHHHHHhcCCCCCEEEE-EC-CCCCcHHHHHHHHHHHHhCCCCE
Confidence 4456677778765433 22 123433 5678888999 888876 43 22378889999999999987644
Q ss_pred EEEEeCCCcCcHHHHHHHHHHcCCCEEeeccc
Q 012949 350 LAVHLHDTYGQSLPNILISLQMGISTVDCSVA 381 (452)
Q Consensus 350 l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~Sv~ 381 (452)
+. .. ..+....+..|+++||+.|.++-.
T Consensus 152 vi-~G---~v~s~e~A~~a~~aGad~Ivvs~h 179 (336)
T 1ypf_A 152 VI-AG---NVGTPEAVRELENAGADATKVGIG 179 (336)
T ss_dssp EE-EE---EECSHHHHHHHHHHTCSEEEECSS
T ss_pred EE-EC---CcCCHHHHHHHHHcCCCEEEEecC
Confidence 43 32 234568899999999999999644
No 257
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=88.67 E-value=4.3 Score=39.68 Aligned_cols=135 Identities=13% Similarity=0.094 Sum_probs=86.2
Q ss_pred hHHHHHHcCCCEEEEEec-CChH-HHhhh-cCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHH
Q 012949 232 GFEAAIAAGAKEVAIFAS-ASEA-FSKSN-INCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYV 308 (452)
Q Consensus 232 ~ie~a~~~Gi~~V~i~~s-~Sd~-~~~~~-~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~ 308 (452)
....+.++|++.|.+..+ ++-. +-..- .-.|.++.+..++.+.+. ..++|.+. .|.. --+++.+.+.
T Consensus 33 sA~i~e~aGf~ai~vs~s~~a~~~lG~pD~~~vt~~em~~~~~~I~r~---~~~PviaD------~d~G-yg~~~~~~~~ 102 (287)
T 3b8i_A 33 SARIAADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRV---ARLPVIAD------ADHG-YGNALNVMRT 102 (287)
T ss_dssp HHHHHHHTTCSCEEECHHHHHHHHHSCCSSSCSCHHHHHHHHHHHHTT---CSSCEEEE------CTTC-SSSHHHHHHH
T ss_pred HHHHHHHcCCCEEEeCcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhc---CCCCEEEE------CCCC-CCCHHHHHHH
Confidence 344566789998877654 3321 11111 245788888776655443 34555422 2333 2278899999
Q ss_pred HHHHHHCCcCEEEEcCCcC----------CCcHHHHHHHHHHHHHhC--CCccEEEEeCC---CcCcHHHHHHHHHHcCC
Q 012949 309 AKELHDMGCFEISLGDTIG----------VGTPGTVVPMLEAVMAVV--PVEKLAVHLHD---TYGQSLPNILISLQMGI 373 (452)
Q Consensus 309 a~~l~~~Gad~I~L~DT~G----------~~~P~~v~~li~~l~~~~--p~~~l~vH~Hn---d~GlA~ANaLaAl~aGa 373 (452)
++++.++|+..|.|-|..+ +..++++.+.|+++++.- ++..|---.-. .+--++.-+.+-.+|||
T Consensus 103 v~~l~~aGa~gv~iED~~~pKrcgh~~gkl~~~~e~~~~I~aa~~a~~~~~~~i~aRtdaa~~gl~~ai~Ra~ay~eAGA 182 (287)
T 3b8i_A 103 VVELERAGIAALTIEDTLLPAQFGRKSTDLICVEEGVGKIRAALEARVDPALTIIARTNAELIDVDAVIQRTLAYQEAGA 182 (287)
T ss_dssp HHHHHHHTCSEEEEECBCCSCCTTTCTTCBCCHHHHHHHHHHHHHHCCSTTSEEEEEEETTTSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhCCeEEEEcCCCCccccCCCCCCccCHHHHHHHHHHHHHcCCCCCcEEEEechhhhcCHHHHHHHHHHHHHcCC
Confidence 9999999999999999974 455677888899988874 33223223222 11237788888899999
Q ss_pred CEE
Q 012949 374 STV 376 (452)
Q Consensus 374 ~~V 376 (452)
+.|
T Consensus 183 d~i 185 (287)
T 3b8i_A 183 DGI 185 (287)
T ss_dssp SEE
T ss_pred CEE
Confidence 955
No 258
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=88.59 E-value=5.3 Score=40.40 Aligned_cols=139 Identities=14% Similarity=0.058 Sum_probs=86.5
Q ss_pred HhHHHHH-HcCCCEEEEEecC--------ChHHH---hhhcCC-CHHHHHHHHHHHHHHHHhC-CC-cEEEEEEee-ecC
Q 012949 231 QGFEAAI-AAGAKEVAIFASA--------SEAFS---KSNINC-SIEDSLVRYRAVAHAAKVL-SI-PVRGYVSCV-VGC 294 (452)
Q Consensus 231 ~~ie~a~-~~Gi~~V~i~~s~--------Sd~~~---~~~~~~-s~e~~l~~~~~~v~~Ak~~-G~-~V~~~l~~~-~g~ 294 (452)
+..+.|+ ++|.|.|.|-..- |+..+ ...+|- |.++-.+.+.++++.+|+. |- .|.+-|+.. +-.
T Consensus 178 ~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~avg~~~v~vRis~~~~~~ 257 (379)
T 3aty_A 178 EGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSDRVGLRISPLNGVH 257 (379)
T ss_dssp HHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCGG
T ss_pred HHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhcCCCeEEEEECcccccc
Confidence 3556788 8999999986542 23222 223555 8888788888888888774 42 344334321 000
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCc--CCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcC
Q 012949 295 PVEGAIPPSKVAYVAKELHDMGCFEISLGDTI--GVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMG 372 (452)
Q Consensus 295 p~~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~--G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aG 372 (452)
......+.+...++++.+.++|++.|.+.... +...|. + ++.+++.++. +|..=.- + -...+..+++.|
T Consensus 258 ~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~~~~~---~-~~~ir~~~~i-Pvi~~G~--i--t~~~a~~~l~~g 328 (379)
T 3aty_A 258 GMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVNQQIGD---V-VAWVRGSYSG-VKISNLR--Y--DFEEADQQIREG 328 (379)
T ss_dssp GCCCSCHHHHHHHHHHHHGGGCCSEEEEECSCTTSCCCCC---H-HHHHHTTCCS-CEEEESS--C--CHHHHHHHHHTT
T ss_pred cCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcCCCCccH---H-HHHHHHHCCC-cEEEECC--C--CHHHHHHHHHcC
Confidence 01234567888999999999999999886521 011232 5 7788887754 4443221 2 367788889998
Q ss_pred -CCEEee
Q 012949 373 -ISTVDC 378 (452)
Q Consensus 373 -a~~VD~ 378 (452)
||.|-.
T Consensus 329 ~aD~V~i 335 (379)
T 3aty_A 329 KVDAVAF 335 (379)
T ss_dssp SCSEEEE
T ss_pred CCeEEEe
Confidence 887643
No 259
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=88.58 E-value=5.8 Score=37.75 Aligned_cols=168 Identities=14% Similarity=0.039 Sum_probs=87.1
Q ss_pred HHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEE-ecchhhhhhhhhhhhhccchhhhhhhhcc
Q 012949 151 VELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVL-TPNLKVILQRSILFQQCHASVISSNLWVY 229 (452)
Q Consensus 151 ~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l-~~~~~~~i~r~~~~~~~~~~~i~~~~~~~ 229 (452)
.++++.|.++|.|.||+|.-.. ...+.+++.++++....++.+ .+...
T Consensus 23 ~~~~~~l~~~GaD~ielG~S~G-------vt~~~~~~~v~~ir~~~~Pivlm~y~~------------------------ 71 (240)
T 1viz_A 23 DEQLEILCESGTDAVIIGGSDG-------VTEDNVLRMMSKVRRFLVPCVLEVSAI------------------------ 71 (240)
T ss_dssp HHHHHHHHTSCCSEEEECC-----------CHHHHHHHHHHHTTSSSCEEEECSCG------------------------
T ss_pred HHHHHHHHHcCCCEEEECCCCC-------CCHHHHHHHHHHhhCcCCCEEEecCcc------------------------
Confidence 4568999999999999997211 123445565655433344432 23221
Q ss_pred HHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCC-----CcEE--EEEEeeecCCCCC--C-
Q 012949 230 LQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLS-----IPVR--GYVSCVVGCPVEG--A- 299 (452)
Q Consensus 230 ~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G-----~~V~--~~l~~~~g~p~~~--r- 299 (452)
..+ ++|+|.+-+..=.++-. .+.. +...++.+++.| +++. +|+.. .|... +
T Consensus 72 -n~i----~~G~dg~iiPdLp~ee~--------~~~~---~g~~~~a~~~~g~~~~~l~~i~~gy~l~---~P~~~~~rl 132 (240)
T 1viz_A 72 -EAI----VPGFDLYFIPSVLNSKN--------ADWI---VGMHQKAMKEYGELMSMEEIVAEGYCIA---NPDCKAAAL 132 (240)
T ss_dssp -GGC----CSCCSEEEEEEETTBSS--------GGGT---THHHHHHHHHCHHHHHHSCEEEEEEEEC---CTTSHHHHH
T ss_pred -ccc----cCCCCEEEEcccCcccC--------hhhh---cchhHHHHHHcCCCCcceeeeecccEEE---CCCCceEEe
Confidence 012 57999877765322210 0000 011235577888 6643 45542 24322 1
Q ss_pred ------CCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCC
Q 012949 300 ------IPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGI 373 (452)
Q Consensus 300 ------~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa 373 (452)
.+++.+..+++...-.+-.-|++. +.|.. ...++|+.+++..+..|+.+= .|.-.......+..||
T Consensus 133 ~~~d~~~~~~~~~~~a~~g~~~~~~~VYl~-s~G~~---~~~~~i~~i~~~~~~~Pv~vG----gGI~t~e~a~~~~~gA 204 (240)
T 1viz_A 133 TEADADLNMDDIVAYARVSELLQLPIFYLE-YSGVL---GDIEAVKKTKAVLETSTLFYG----GGIKDAETAKQYAEHA 204 (240)
T ss_dssp TTBCCCCCHHHHHHHHHHHHHTTCSEEEEE-CTTSC---CCHHHHHHHHHTCSSSEEEEE----SSCCSHHHHHHHHTTC
T ss_pred eccCCCCCHHHHHHHHHhCcccCCCEEEEe-CCCcc---ChHHHHHHHHHhcCCCCEEEE----eccCCHHHHHHHHhCC
Confidence 235555555544332344566654 46762 257788888887633455442 2444444444454598
Q ss_pred CEE
Q 012949 374 STV 376 (452)
Q Consensus 374 ~~V 376 (452)
+.|
T Consensus 205 d~V 207 (240)
T 1viz_A 205 DVI 207 (240)
T ss_dssp SEE
T ss_pred CEE
Confidence 865
No 260
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=88.45 E-value=1.8 Score=42.40 Aligned_cols=102 Identities=15% Similarity=0.129 Sum_probs=71.9
Q ss_pred HHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHHHHHHCCcCE-EEEc-CCcCC-CcHHHHHHHHHHHHH--hC
Q 012949 271 RAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFE-ISLG-DTIGV-GTPGTVVPMLEAVMA--VV 345 (452)
Q Consensus 271 ~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad~-I~L~-DT~G~-~~P~~v~~li~~l~~--~~ 345 (452)
+++.+.|++.|+-|-+ |. -.+.+.+..+++.+.+.+... |.+. .+..+ .....+..+++.+.+ .+
T Consensus 10 ~~ll~~A~~~~yAV~A-----fN-----v~n~e~~~avi~AAee~~sPvIlq~s~~~~~~~~g~~~~~~~v~~~A~~~~~ 79 (288)
T 3q94_A 10 KEMLNKALEGKYAVGQ-----FN-----MNNLEWTQAILAAAEEEKSPVILGVSEGAARHMTGFKTVVAMVKALIEEMNI 79 (288)
T ss_dssp HHHHHHHHHHTCCEEE-----EE-----CCSHHHHHHHHHHHHHTTCCEEEEEEHHHHHHTSCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHCCcEEEE-----Ee-----eCCHHHHHHHHHHHHHhCCCEEEECChhhhhhcCCHHHHHHHHHHHHHhcCC
Confidence 5677899999987752 31 235788989999999998774 4443 23334 234556777877776 44
Q ss_pred CCccEEEEeCCCcCcHHHHHHHHHHcCCC--EEeecccCCCC
Q 012949 346 PVEKLAVHLHDTYGQSLPNILISLQMGIS--TVDCSVAGLGG 385 (452)
Q Consensus 346 p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~--~VD~Sv~GlGe 385 (452)
+ +|+.+|. |-|........|+++|.+ ++|+|-..+-|
T Consensus 80 ~-VPValHl--DHg~~~e~i~~ai~~GFtSVMiDgS~~p~ee 118 (288)
T 3q94_A 80 T-VPVAIHL--DHGSSFEKCKEAIDAGFTSVMIDASHHPFEE 118 (288)
T ss_dssp C-SCEEEEE--EEECSHHHHHHHHHHTCSEEEECCTTSCHHH
T ss_pred C-CcEEEEC--CCCCCHHHHHHHHHcCCCeEEEeCCCCCHHH
Confidence 3 5777765 556678889999999998 77999876544
No 261
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=88.43 E-value=3.7 Score=39.90 Aligned_cols=82 Identities=11% Similarity=0.058 Sum_probs=69.5
Q ss_pred CCCHHHHHHHHHHHHHCCcCEEEEcCCcCC---CcHHHHHHHHHHHHHhC-CCccEEEEe-CCCcCcHHHHHHHHHHcCC
Q 012949 299 AIPPSKVAYVAKELHDMGCFEISLGDTIGV---GTPGTVVPMLEAVMAVV-PVEKLAVHL-HDTYGQSLPNILISLQMGI 373 (452)
Q Consensus 299 r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~li~~l~~~~-p~~~l~vH~-Hnd~GlA~ANaLaAl~aGa 373 (452)
..|.+.+.++++.+.+.|++.|.++-|+|= ++.++-.++++.+++.. +.++|-+|. +++..-++..+..|-++||
T Consensus 19 ~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Ga 98 (292)
T 3daq_A 19 KVNLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGA 98 (292)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTC
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCC
Confidence 678899999999999999999999999985 56788888888888875 345777776 7888889999999999999
Q ss_pred CEEeecc
Q 012949 374 STVDCSV 380 (452)
Q Consensus 374 ~~VD~Sv 380 (452)
+.+=..-
T Consensus 99 davlv~~ 105 (292)
T 3daq_A 99 DAIMLIT 105 (292)
T ss_dssp SEEEEEC
T ss_pred CEEEECC
Confidence 9876643
No 262
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=88.41 E-value=23 Score=35.84 Aligned_cols=19 Identities=21% Similarity=0.396 Sum_probs=16.4
Q ss_pred CCcccHHHHHHHHHcCCCC
Q 012949 393 SGNVATEDVVYMLSGLGVE 411 (452)
Q Consensus 393 aGNaalE~vv~~L~~~Gi~ 411 (452)
.|.++...++.+|+..|++
T Consensus 306 ~G~vD~~~i~~aL~~~gY~ 324 (386)
T 3bdk_A 306 AGDIDMNAVVKLLVDYDWQ 324 (386)
T ss_dssp GSSCCHHHHHHHHHHTTCC
T ss_pred CCCcCHHHHHHHHHHhCCc
Confidence 5889999999999987763
No 263
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=88.37 E-value=7.3 Score=38.00 Aligned_cols=107 Identities=18% Similarity=0.091 Sum_probs=70.2
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 310 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~ 310 (452)
+-++..++.|++.|-+.-+..|.. -.|.+|-.+-++.+++.++. .++|.+.+ +..+.+...++++
T Consensus 36 ~lv~~li~~Gv~Gl~v~GtTGE~~-----~Ls~eEr~~v~~~~~~~~~g-rvpViaGv---------g~~~t~~ai~la~ 100 (303)
T 2wkj_A 36 RLVQFNIQQGIDGLYVGGSTGEAF-----VQSLSEREQVLEIVAEEAKG-KIKLIAHV---------GCVSTAESQQLAA 100 (303)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGG-----GSCHHHHHHHHHHHHHHHTT-TSEEEEEC---------CCSSHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECeeccChh-----hCCHHHHHHHHHHHHHHhCC-CCcEEEec---------CCCCHHHHHHHHH
Confidence 366777889999998887777753 35777777666666665543 34443211 2335677888888
Q ss_pred HHHHCCcCEEEEc-CCcCCCcHHHHHHHHHHHHHhCCCccEEE
Q 012949 311 ELHDMGCFEISLG-DTIGVGTPGTVVPMLEAVMAVVPVEKLAV 352 (452)
Q Consensus 311 ~l~~~Gad~I~L~-DT~G~~~P~~v~~li~~l~~~~p~~~l~v 352 (452)
.+.++|+|.+-+. =..--.+++.+++.++.+.+..++.||-+
T Consensus 101 ~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~~lPiil 143 (303)
T 2wkj_A 101 SAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVV 143 (303)
T ss_dssp HHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHhCCCCEEEecCCCCCCCCHHHHHHHHHHHHHhCCCCCEEE
Confidence 8888999866553 33333577888888888887755234433
No 264
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=88.31 E-value=4.1 Score=40.51 Aligned_cols=24 Identities=8% Similarity=0.077 Sum_probs=10.5
Q ss_pred EEEEe-cCChHHHhhhcCCCHHHHH
Q 012949 244 VAIFA-SASEAFSKSNINCSIEDSL 267 (452)
Q Consensus 244 V~i~~-s~Sd~~~~~~~~~s~e~~l 267 (452)
|.|+. ..-|-++......+.++.+
T Consensus 9 v~i~DttlRDG~Q~~~~~~~~e~k~ 33 (345)
T 1nvm_A 9 LYISDVTLRDGSHAIRHQYTLDDVR 33 (345)
T ss_dssp CEEEECTTTHHHHHTTTCCCHHHHH
T ss_pred cEEEECCCCcccCCCCCCCCHHHHH
Confidence 44443 4444444333444444444
No 265
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=88.28 E-value=9.2 Score=36.19 Aligned_cols=171 Identities=13% Similarity=0.050 Sum_probs=88.3
Q ss_pred HHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEe-cchhhhhhhhhhhhhccchhhhhhhhcc
Q 012949 151 VELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLT-PNLKVILQRSILFQQCHASVISSNLWVY 229 (452)
Q Consensus 151 ~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~-~~~~~~i~r~~~~~~~~~~~i~~~~~~~ 229 (452)
.++++.|.+.|.|.||+|.- .. ...+.+++.++++....++.+. +-.. .
T Consensus 23 ~~~~~~l~~~GaD~IelG~S--~g-----~t~~~~~~~v~~ir~~~~Pivl~~y~~----------n------------- 72 (234)
T 2f6u_A 23 DEIIKAVADSGTDAVMISGT--QN-----VTYEKARTLIEKVSQYGLPIVVEPSDP----------S------------- 72 (234)
T ss_dssp HHHHHHHHTTTCSEEEECCC--TT-----CCHHHHHHHHHHHTTSCCCEEECCSSC----------C-------------
T ss_pred HHHHHHHHHcCCCEEEECCC--CC-----CCHHHHHHHHHHhcCCCCCEEEecCCc----------c-------------
Confidence 45689999999999999972 11 1345566666655433444332 2220 0
Q ss_pred HHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHH----HHHHhCC-----CcE--EEEEEeeecCCCC-
Q 012949 230 LQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVA----HAAKVLS-----IPV--RGYVSCVVGCPVE- 297 (452)
Q Consensus 230 ~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v----~~Ak~~G-----~~V--~~~l~~~~g~p~~- 297 (452)
.+ ++|+|.+-+..=.++-. .+..+..-.+.+ +.++++| +++ .+||.. .|..
T Consensus 73 --~i----~~gvDg~iipdLp~ee~--------~~~~~g~~~~~~~~~~~~~~~~g~~~~~l~~I~~gYil~---~P~~~ 135 (234)
T 2f6u_A 73 --NV----VYDVDYLFVPTVLNSAD--------GDWITGKHAQWVRMHYENLQKFTEIIESEFIQIEGYIVL---NPDSA 135 (234)
T ss_dssp --CC----CCCSSEEEEEEETTBSB--------GGGTTHHHHHHHHTTGGGHHHHHHHHHSTTEEEEEEEEC---CTTSH
T ss_pred --hh----hcCCCEEEEcccCCCCC--------HHHHhhhHHHHHHhhhhhHHHcCCcccceeeeecceEEE---CCCCc
Confidence 12 67999887765332210 011111111222 2236677 664 345543 3432
Q ss_pred --------CCCCHHHHHHHHHHHHH-CCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHH
Q 012949 298 --------GAIPPSKVAYVAKELHD-MGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILIS 368 (452)
Q Consensus 298 --------~r~d~e~l~~~a~~l~~-~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaA 368 (452)
...+++.+..+++...+ +|-..|++ |+.|.. ...++|+.+++..+.+|+.+=+ |.-..-....
T Consensus 136 ~~rl~~g~~~~~~e~~~~~a~~g~~~l~~~~Vyl-~~~G~~---~~~~~i~~i~~~~~~~Pv~vGg----GI~s~e~a~~ 207 (234)
T 2f6u_A 136 VARVTKALCNIDKELAASYALVGEKLFNLPIIYI-EYSGTY---GNPELVAEVKKVLDKARLFYGG----GIDSREKARE 207 (234)
T ss_dssp HHHHTTBCCCCCHHHHHHHHHHHHHTTCCSEEEE-ECTTSC---CCHHHHHHHHHHCSSSEEEEES----CCCSHHHHHH
T ss_pred eEEeecCCCCCCHHHHHHHHHhhhhhcCCCEEEE-eCCCCc---chHHHHHHHHHhCCCCCEEEEe----cCCCHHHHHH
Confidence 01256666666665543 34466666 446752 2567888888876334544422 3332333333
Q ss_pred HHcCCCEE
Q 012949 369 LQMGISTV 376 (452)
Q Consensus 369 l~aGa~~V 376 (452)
+..||+.|
T Consensus 208 ~~~gAd~V 215 (234)
T 2f6u_A 208 MLRYADTI 215 (234)
T ss_dssp HHHHSSEE
T ss_pred HHhCCCEE
Confidence 33388865
No 266
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=88.27 E-value=5.6 Score=39.02 Aligned_cols=99 Identities=13% Similarity=0.066 Sum_probs=60.8
Q ss_pred hHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHHH
Q 012949 232 GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKE 311 (452)
Q Consensus 232 ~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~ 311 (452)
-++..++.|++.|-+.-+..|. .-.|.+|-.+-++.+++.+ -.++|.+.+ +..+.....++++.
T Consensus 34 lv~~li~~Gv~Gl~v~GtTGE~-----~~Lt~~Er~~v~~~~v~~~--grvpViaGv---------g~~~t~~ai~la~~ 97 (313)
T 3dz1_A 34 LTDFYAEVGCEGVTVLGILGEA-----PKLDAAEAEAVATRFIKRA--KSMQVIVGV---------SAPGFAAMRRLARL 97 (313)
T ss_dssp HHHHHHHTTCSEEEESTGGGTG-----GGSCHHHHHHHHHHHHHHC--TTSEEEEEC---------CCSSHHHHHHHHHH
T ss_pred HHHHHHHCCCCEEEeCccCcCh-----hhCCHHHHHHHHHHHHHHc--CCCcEEEec---------CCCCHHHHHHHHHH
Confidence 5667778899888777666664 2356666666555555555 234443211 22355677777777
Q ss_pred HHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCC
Q 012949 312 LHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVP 346 (452)
Q Consensus 312 l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p 346 (452)
+.++|+|.+-+.=..-..+++.+++.++.+.+..+
T Consensus 98 A~~~Gadavlv~~P~~~~s~~~l~~~f~~va~a~~ 132 (313)
T 3dz1_A 98 SMDAGAAGVMIAPPPSLRTDEQITTYFRQATEAIG 132 (313)
T ss_dssp HHHHTCSEEEECCCTTCCSHHHHHHHHHHHHHHHC
T ss_pred HHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHhCC
Confidence 77778876666444444566667777777766543
No 267
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=88.19 E-value=1.8 Score=45.39 Aligned_cols=70 Identities=16% Similarity=0.167 Sum_probs=51.7
Q ss_pred HHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEeeccc
Q 012949 306 AYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCSVA 381 (452)
Q Consensus 306 ~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~Sv~ 381 (452)
.+.++.+.++|+|.|.| |+. ...+..+.++|+.+++.+|+.+|.+- ......-+..++++||+.|.+...
T Consensus 233 ~~~a~~l~~aG~d~I~i-d~a-~g~~~~~~~~i~~ir~~~p~~~Vi~g----~v~t~e~a~~l~~aGaD~I~Vg~g 302 (496)
T 4fxs_A 233 EERVKALVEAGVDVLLI-DSS-HGHSEGVLQRIRETRAAYPHLEIIGG----NVATAEGARALIEAGVSAVKVGIG 302 (496)
T ss_dssp HHHHHHHHHTTCSEEEE-ECS-CTTSHHHHHHHHHHHHHCTTCCEEEE----EECSHHHHHHHHHHTCSEEEECSS
T ss_pred HHHHHHHHhccCceEEe-ccc-cccchHHHHHHHHHHHHCCCceEEEc----ccCcHHHHHHHHHhCCCEEEECCC
Confidence 45677888899999988 433 23457788999999999987777662 123345678889999999987654
No 268
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=88.18 E-value=3.7 Score=41.45 Aligned_cols=143 Identities=13% Similarity=0.023 Sum_probs=85.1
Q ss_pred HhHHHHHHcCCCEEEEEecC--------ChHHH--hhhcCCCHHHHHHHHHHHHHHHHhC-CC-cEEEEEEeeecCC-CC
Q 012949 231 QGFEAAIAAGAKEVAIFASA--------SEAFS--KSNINCSIEDSLVRYRAVAHAAKVL-SI-PVRGYVSCVVGCP-VE 297 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~--------Sd~~~--~~~~~~s~e~~l~~~~~~v~~Ak~~-G~-~V~~~l~~~~g~p-~~ 297 (452)
+..+.|.++|.|.|.|-.+- |+..+ ...+|-|.++-.+.+.++++.+|+. |- .|.+-++.....+ ..
T Consensus 171 ~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vrls~~~~~~g~~ 250 (376)
T 1icp_A 171 VAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHYNEAG 250 (376)
T ss_dssp HHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCTTTCC
T ss_pred HHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEEeccccccCCCC
Confidence 35567788999999986542 22211 2335667887778888888888764 42 5554454210000 01
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCc-CCCcHH-HHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcC-CC
Q 012949 298 GAIPPSKVAYVAKELHDMGCFEISLGDTI-GVGTPG-TVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMG-IS 374 (452)
Q Consensus 298 ~r~d~e~l~~~a~~l~~~Gad~I~L~DT~-G~~~P~-~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aG-a~ 374 (452)
...+.+...++++.+.++|++.|.+..-. ....|. ...++++.+++.++. +|..-. .+ -...+..+++.| ||
T Consensus 251 ~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~vr~~~~i-Pvi~~G--~i--~~~~a~~~l~~g~aD 325 (376)
T 1icp_A 251 DTNPTALGLYMVESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAYKG-TFIVAG--GY--DREDGNRALIEDRAD 325 (376)
T ss_dssp CSCHHHHHHHHHHHHGGGCCSEEEEECCSCCC------CCCCSHHHHHHCCS-CEEEES--SC--CHHHHHHHHHTTSCS
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEcCCcccCCCCccccHHHHHHHHHHcCC-CEEEeC--CC--CHHHHHHHHHCCCCc
Confidence 23456678899999999999999885321 001121 112456778887764 444322 12 246778888888 88
Q ss_pred EEee
Q 012949 375 TVDC 378 (452)
Q Consensus 375 ~VD~ 378 (452)
.|-.
T Consensus 326 ~V~~ 329 (376)
T 1icp_A 326 LVAY 329 (376)
T ss_dssp EEEE
T ss_pred EEee
Confidence 7643
No 269
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=88.17 E-value=7.2 Score=36.04 Aligned_cols=102 Identities=12% Similarity=-0.008 Sum_probs=67.9
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 310 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~ 310 (452)
+.++.+.++|.+.|.++.. +. ....+. +.+.++.+.+++.|+++.. +.... . ...+.+.+.++
T Consensus 34 ~~l~~~~~~G~~~vEl~~~----~~--~~~~~~----~~~~~~~~~l~~~gl~i~~-~~~~~--~----~~~~~~~~~i~ 96 (257)
T 3lmz_A 34 TTLKTLERLDIHYLCIKDF----HL--PLNSTD----EQIRAFHDKCAAHKVTGYA-VGPIY--M----KSEEEIDRAFD 96 (257)
T ss_dssp HHHHHHHHTTCCEEEECTT----TS--CTTCCH----HHHHHHHHHHHHTTCEEEE-EEEEE--E----CSHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEecc----cC--CCCCCH----HHHHHHHHHHHHcCCeEEE-Eeccc--c----CCHHHHHHHHH
Confidence 4788999999999999854 10 112222 3345666788899998752 22111 1 35788999999
Q ss_pred HHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCC
Q 012949 311 ELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHD 356 (452)
Q Consensus 311 ~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hn 356 (452)
.+.++|++.|.+. .| .+.+.++.+...+ .+ +.|.+|.|+
T Consensus 97 ~A~~lGa~~v~~~--p~---~~~l~~l~~~a~~-~g-v~l~lEn~~ 135 (257)
T 3lmz_A 97 YAKRVGVKLIVGV--PN---YELLPYVDKKVKE-YD-FHYAIHLHG 135 (257)
T ss_dssp HHHHHTCSEEEEE--EC---GGGHHHHHHHHHH-HT-CEEEEECCC
T ss_pred HHHHhCCCEEEec--CC---HHHHHHHHHHHHH-cC-CEEEEecCC
Confidence 9999999988873 22 3455555555443 34 579999996
No 270
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=88.17 E-value=1.2 Score=42.08 Aligned_cols=69 Identities=14% Similarity=0.106 Sum_probs=53.4
Q ss_pred HHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEeecccCCC
Q 012949 308 VAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCSVAGLG 384 (452)
Q Consensus 308 ~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~Sv~GlG 384 (452)
.++++.++|+|.|.+ |+.....|..+.++++.+++. +..+..-+|+ ...+..|.++|+++|=+++.|+.
T Consensus 93 ~i~~~~~aGad~I~l-~~~~~~~p~~l~~~i~~~~~~--g~~v~~~v~t-----~eea~~a~~~Gad~Ig~~~~g~t 161 (229)
T 3q58_A 93 DVDALAQAGADIIAF-DASFRSRPVDIDSLLTRIRLH--GLLAMADCST-----VNEGISCHQKGIEFIGTTLSGYT 161 (229)
T ss_dssp HHHHHHHHTCSEEEE-ECCSSCCSSCHHHHHHHHHHT--TCEEEEECSS-----HHHHHHHHHTTCSEEECTTTTSS
T ss_pred HHHHHHHcCCCEEEE-CccccCChHHHHHHHHHHHHC--CCEEEEecCC-----HHHHHHHHhCCCCEEEecCccCC
Confidence 356678899998866 887777899999999999874 3445555554 57778999999999977777663
No 271
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=88.15 E-value=2.1 Score=41.99 Aligned_cols=82 Identities=11% Similarity=0.063 Sum_probs=70.5
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCcCC---CcHHHHHHHHHHHHHhCC-CccEEEEe-CCCcCcHHHHHHHHHHcC
Q 012949 298 GAIPPSKVAYVAKELHDMGCFEISLGDTIGV---GTPGTVVPMLEAVMAVVP-VEKLAVHL-HDTYGQSLPNILISLQMG 372 (452)
Q Consensus 298 ~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~li~~l~~~~p-~~~l~vH~-Hnd~GlA~ANaLaAl~aG 372 (452)
+..|.+.+.++++.+.+.|++.|.++-|+|= ++.++-.++++.+++..+ .++|-+|. +|+..-++..+..|-++|
T Consensus 30 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~G 109 (307)
T 3s5o_A 30 AEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVG 109 (307)
T ss_dssp SCBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcC
Confidence 5789999999999999999999999999994 788999999999998774 45666665 678888999999999999
Q ss_pred CCEEeec
Q 012949 373 ISTVDCS 379 (452)
Q Consensus 373 a~~VD~S 379 (452)
|+.+=..
T Consensus 110 adavlv~ 116 (307)
T 3s5o_A 110 ADAAMVV 116 (307)
T ss_dssp CSEEEEE
T ss_pred CCEEEEc
Confidence 9977654
No 272
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=88.14 E-value=9.7 Score=37.05 Aligned_cols=122 Identities=13% Similarity=0.022 Sum_probs=83.0
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 310 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~ 310 (452)
+.++..++.|++.|-+.-+..|.+ -.|.+|-.+-++.+++.++...++|.+.+ +..+.+...++++
T Consensus 32 ~lv~~li~~Gv~gl~v~GttGE~~-----~Ls~~Er~~v~~~~~~~~~g~rvpviaGv---------g~~~t~~ai~la~ 97 (301)
T 3m5v_A 32 RLIKRQIENGIDAVVPVGTTGESA-----TLTHEEHRTCIEIAVETCKGTKVKVLAGA---------GSNATHEAVGLAK 97 (301)
T ss_dssp HHHHHHHHTTCCEEECSSTTTTGG-----GSCHHHHHHHHHHHHHHHTTSSCEEEEEC---------CCSSHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECccccChh-----hCCHHHHHHHHHHHHHHhCCCCCeEEEeC---------CCCCHHHHHHHHH
Confidence 366778889999998887777753 45777777777666666654345554211 2345788899999
Q ss_pred HHHHCCcCEEEEc-CCcCCCcHHHHHHHHHHHHHhCCCccEEEE-----eCCCcCcHHHHHHH
Q 012949 311 ELHDMGCFEISLG-DTIGVGTPGTVVPMLEAVMAVVPVEKLAVH-----LHDTYGQSLPNILI 367 (452)
Q Consensus 311 ~l~~~Gad~I~L~-DT~G~~~P~~v~~li~~l~~~~p~~~l~vH-----~Hnd~GlA~ANaLa 367 (452)
.+.++|+|.+-+. =..--.+++.+.+.++.+.+..+ .||-++ .+.++...+..-|+
T Consensus 98 ~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~-lPiilYn~P~~tg~~l~~~~~~~La 159 (301)
T 3m5v_A 98 FAKEHGADGILSVAPYYNKPTQQGLYEHYKAIAQSVD-IPVLLYNVPGRTGCEISTDTIIKLF 159 (301)
T ss_dssp HHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCS-SCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred HHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCC-CCEEEEeCchhhCcCCCHHHHHHHH
Confidence 9999999966554 33344577889999999988874 355543 34555555544443
No 273
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=88.08 E-value=5 Score=38.49 Aligned_cols=114 Identities=8% Similarity=0.003 Sum_probs=67.1
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeee-----cCCCC------C-
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVV-----GCPVE------G- 298 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~-----g~p~~------~- 298 (452)
+.++.+.++|.+.|-++..... ...+.+ ..++.+.+++.|+++.. +...+ ..|+. .
T Consensus 33 ~~l~~~a~~G~~~VEl~~~~~~----~~~~~~-------~~~~~~~l~~~GL~v~~-~~~~~~~~~~~~p~~~~~~~~~~ 100 (303)
T 3l23_A 33 ANLRKVKDMGYSKLELAGYGKG----AIGGVP-------MMDFKKMAEDAGLKIIS-SHVNPVDTSISDPFKAMIFKYSK 100 (303)
T ss_dssp HHHHHHHHTTCCEEEECCEETT----EETTEE-------HHHHHHHHHHTTCEEEE-EECCCBCTTCSSTTTTBCCSCCT
T ss_pred HHHHHHHHcCCCEEEeccccCc----ccCCCC-------HHHHHHHHHHcCCeEEE-EecccccccccCcccccccccch
Confidence 4788999999999999752110 001111 23455778889999852 22111 11111 0
Q ss_pred ---CCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhC-----CCcc--EEEEeCC
Q 012949 299 ---AIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVV-----PVEK--LAVHLHD 356 (452)
Q Consensus 299 ---r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~-----p~~~--l~vH~Hn 356 (452)
....+.+.+.++.+.++|++.|.+.-.....++.....+++.+++.. -++. |.+|.|+
T Consensus 101 ~~~~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~~~l~~En~~ 168 (303)
T 3l23_A 101 EVTPKIMEYWKATAADHAKLGCKYLIQPMMPTITTHDEAKLVCDIFNQASDVIKAEGIATGFGYHNHN 168 (303)
T ss_dssp TTHHHHHHHHHHHHHHHHHTTCSEEEECSCCCCCSHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCS
T ss_pred hhHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcceEEEccCc
Confidence 01134567788889999999998862211235556555555554432 2578 9999997
No 274
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=88.08 E-value=4.1 Score=37.19 Aligned_cols=71 Identities=14% Similarity=0.234 Sum_probs=51.0
Q ss_pred HHHHHHHCCcCEEEEcCCcCCCcH-HHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEeecccCCC
Q 012949 308 VAKELHDMGCFEISLGDTIGVGTP-GTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCSVAGLG 384 (452)
Q Consensus 308 ~a~~l~~~Gad~I~L~DT~G~~~P-~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~Sv~GlG 384 (452)
.++.+.++|++.|.+- +.-...| ..+.++++.+++.+|+..+.+-.|+ ...+..+.++|+++|-++..|..
T Consensus 80 ~i~~~~~~Gad~v~l~-~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~~~t-----~~e~~~~~~~G~d~i~~~~~g~t 151 (223)
T 1y0e_A 80 EVDELIESQCEVIALD-ATLQQRPKETLDELVSYIRTHAPNVEIMADIAT-----VEEAKNAARLGFDYIGTTLHGYT 151 (223)
T ss_dssp HHHHHHHHTCSEEEEE-CSCSCCSSSCHHHHHHHHHHHCTTSEEEEECSS-----HHHHHHHHHTTCSEEECTTTTSS
T ss_pred HHHHHHhCCCCEEEEe-eecccCcccCHHHHHHHHHHhCCCceEEecCCC-----HHHHHHHHHcCCCEEEeCCCcCc
Confidence 3455678899998873 3333345 4678899999998887777766664 45577789999999977665553
No 275
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=87.97 E-value=3.1 Score=43.61 Aligned_cols=130 Identities=18% Similarity=0.181 Sum_probs=74.1
Q ss_pred HHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhc-cCCceeEEecchhhhhhhhhhhhhccchhhhhhhh
Q 012949 149 VKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDL-EGARLPVLTPNLKVILQRSILFQQCHASVISSNLW 227 (452)
Q Consensus 149 ~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~-~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~ 227 (452)
+-.+.++.|.++|++.|++.+.. +. .....+.++.+++. ++..+ ++-+..
T Consensus 231 d~~~~a~~l~~aG~d~I~id~a~-g~----~~~~~~~i~~ir~~~p~~~V--i~g~v~---------------------- 281 (496)
T 4fxs_A 231 GNEERVKALVEAGVDVLLIDSSH-GH----SEGVLQRIRETRAAYPHLEI--IGGNVA---------------------- 281 (496)
T ss_dssp CCHHHHHHHHHTTCSEEEEECSC-TT----SHHHHHHHHHHHHHCTTCCE--EEEEEC----------------------
T ss_pred chHHHHHHHHhccCceEEecccc-cc----chHHHHHHHHHHHHCCCceE--EEcccC----------------------
Confidence 34677889999999999998642 11 01122344444432 33332 221111
Q ss_pred ccHHhHHHHHHcCCCEEEEEe-cCChHHH--hhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHH
Q 012949 228 VYLQGFEAAIAAGAKEVAIFA-SASEAFS--KSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSK 304 (452)
Q Consensus 228 ~~~~~ie~a~~~Gi~~V~i~~-s~Sd~~~--~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~ 304 (452)
+.++++.+.++|+|.|.+.. +.+.... ....+.. .+..+.++++++++.+++|.+ +.+-.+++.
T Consensus 282 -t~e~a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~p---~~~~i~~v~~~~~~~~iPVIa---------~GGI~~~~d 348 (496)
T 4fxs_A 282 -TAEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVP---QITAIADAAGVANEYGIPVIA---------DGGIRFSGD 348 (496)
T ss_dssp -SHHHHHHHHHHTCSEEEECSSCCTTBCHHHHHCCCCC---HHHHHHHHHHHHGGGTCCEEE---------ESCCCSHHH
T ss_pred -cHHHHHHHHHhCCCEEEECCCCCcCcccccccCCCcc---HHHHHHHHHHHhccCCCeEEE---------eCCCCCHHH
Confidence 23478889999999998752 1111101 1112222 345556777788888888752 234456666
Q ss_pred HHHHHHHHHHCCcCEEEEcC
Q 012949 305 VAYVAKELHDMGCFEISLGD 324 (452)
Q Consensus 305 l~~~a~~l~~~Gad~I~L~D 324 (452)
+.+. .++||+.+.+.=
T Consensus 349 i~ka----la~GAd~V~iGs 364 (496)
T 4fxs_A 349 ISKA----IAAGASCVMVGS 364 (496)
T ss_dssp HHHH----HHTTCSEEEEST
T ss_pred HHHH----HHcCCCeEEecH
Confidence 6554 347999888753
No 276
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=87.93 E-value=4.1 Score=40.01 Aligned_cols=135 Identities=13% Similarity=0.179 Sum_probs=85.1
Q ss_pred HHHHHHcCCCEEEEEec-CCh-HHHhhh-cCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHH
Q 012949 233 FEAAIAAGAKEVAIFAS-ASE-AFSKSN-INCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVA 309 (452)
Q Consensus 233 ie~a~~~Gi~~V~i~~s-~Sd-~~~~~~-~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a 309 (452)
...+.++|++.|.+..+ ++- .+-..- .-.|.++.+..++.+.+.+ ..+|.+-+ |...-.+++.+.+.+
T Consensus 30 A~~~~~aG~~ai~vs~~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~---~~PviaD~------d~Gyg~~~~~~~~~v 100 (295)
T 1xg4_A 30 ALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVC---SLPLLVDA------DIGFGSSAFNVARTV 100 (295)
T ss_dssp HHHHHHTTCSCEEECHHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHC---CSCEEEEC------TTCSSSSHHHHHHHH
T ss_pred HHHHHHcCCCEEEECchHhhhhhcCCCCCCCCCHHHHHHHHHHHHhhC---CCCEEecC------CcccCCCHHHHHHHH
Confidence 34556789998877544 221 111111 2357888888776665543 35554222 222223789999999
Q ss_pred HHHHHCCcCEEEEcCCcC-----------CCcHHHHHHHHHHHHHhCCCccEEEEeCCC------cCcHHHHHHHHHHcC
Q 012949 310 KELHDMGCFEISLGDTIG-----------VGTPGTVVPMLEAVMAVVPVEKLAVHLHDT------YGQSLPNILISLQMG 372 (452)
Q Consensus 310 ~~l~~~Gad~I~L~DT~G-----------~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd------~GlA~ANaLaAl~aG 372 (452)
+.+.++|+..|.|-|..+ +...+...+.|++.++......+-+-.-.| +--++.-+.+..+||
T Consensus 101 ~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda~~~~gl~~ai~ra~ay~eAG 180 (295)
T 1xg4_A 101 KSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDAAIERAQAYVEAG 180 (295)
T ss_dssp HHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECCHHHHCHHHHHHHHHHHHHTT
T ss_pred HHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEecHHhhhcCHHHHHHHHHHHHHcC
Confidence 999999999999999974 333445667777777764222333433333 134677888899999
Q ss_pred CCEE
Q 012949 373 ISTV 376 (452)
Q Consensus 373 a~~V 376 (452)
|+.|
T Consensus 181 Ad~i 184 (295)
T 1xg4_A 181 AEML 184 (295)
T ss_dssp CSEE
T ss_pred CCEE
Confidence 9965
No 277
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=87.91 E-value=0.86 Score=43.66 Aligned_cols=79 Identities=15% Similarity=0.041 Sum_probs=53.3
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHH--HHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEe
Q 012949 300 IPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGT--VVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVD 377 (452)
Q Consensus 300 ~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~--v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD 377 (452)
.|...+.+.++.+.++|+|++-+-=+-|...|.- =.++++.+|+..|..++.+|.+=+.--.. .-.+.++||++|.
T Consensus 37 aD~~~L~~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~~p~~~ldvHLmv~~p~~~--i~~~~~aGAd~it 114 (246)
T 3inp_A 37 ADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITAGMDVHLMVKPVDAL--IESFAKAGATSIV 114 (246)
T ss_dssp SCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHHTCCSCEEEEEECSSCHHH--HHHHHHHTCSEEE
T ss_pred CChhhHHHHHHHHHHcCCCEEEEEecCCCcCcchhcCHHHHHHHHHhCCCCeEEEEEeeCCHHHH--HHHHHHcCCCEEE
Confidence 4667788999999999999554422225544322 12578888888877889999994433222 3446689999887
Q ss_pred ecc
Q 012949 378 CSV 380 (452)
Q Consensus 378 ~Sv 380 (452)
.-.
T Consensus 115 vH~ 117 (246)
T 3inp_A 115 FHP 117 (246)
T ss_dssp ECG
T ss_pred Ecc
Confidence 653
No 278
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=87.90 E-value=2.3 Score=43.03 Aligned_cols=101 Identities=10% Similarity=0.117 Sum_probs=78.8
Q ss_pred CCCCCHHHHHHHHHHHHHCCcCEEEEcCCcC---CCcHHHHHHHHHHHHHhCCC-ccEEEEe-CCCcCcHHHHHHHHHHc
Q 012949 297 EGAIPPSKVAYVAKELHDMGCFEISLGDTIG---VGTPGTVVPMLEAVMAVVPV-EKLAVHL-HDTYGQSLPNILISLQM 371 (452)
Q Consensus 297 ~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G---~~~P~~v~~li~~l~~~~p~-~~l~vH~-Hnd~GlA~ANaLaAl~a 371 (452)
.+..|.+.+.++++.+.+.|++.|.++-|+| .++.++-.++++.+.+...+ ++|-++. +++..-++..+..|-++
T Consensus 74 dg~ID~~al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~ 153 (360)
T 4dpp_A 74 DGRFDLEAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFAV 153 (360)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHT
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHHc
Confidence 3578999999999999999999999999999 67888888889888887643 5666655 57888888899999999
Q ss_pred CCCEEeecccCCCCCCCCCCCCCcccHHHHHHHHHc
Q 012949 372 GISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSG 407 (452)
Q Consensus 372 Ga~~VD~Sv~GlGecP~a~graGNaalE~vv~~L~~ 407 (452)
||+.+=..- ||-. .++-|+++..++.
T Consensus 154 Gadavlvv~------PyY~----k~sq~gl~~hf~~ 179 (360)
T 4dpp_A 154 GMHAALHIN------PYYG----KTSIEGLIAHFQS 179 (360)
T ss_dssp TCSEEEEEC------CCSS----CCCHHHHHHHHHT
T ss_pred CCCEEEEcC------CCCC----CCCHHHHHHHHHH
Confidence 999775542 3221 1456777777663
No 279
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=87.86 E-value=2.2 Score=42.04 Aligned_cols=73 Identities=16% Similarity=0.192 Sum_probs=52.2
Q ss_pred CHHHHHHHHHHHHHCCcCEEEEcC-C-----cCCCcHHHHHHHH---HHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHc
Q 012949 301 PPSKVAYVAKELHDMGCFEISLGD-T-----IGVGTPGTVVPML---EAVMAVVPVEKLAVHLHDTYGQSLPNILISLQM 371 (452)
Q Consensus 301 d~e~l~~~a~~l~~~Gad~I~L~D-T-----~G~~~P~~v~~li---~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~a 371 (452)
+++...+.++.+.+.|||.|-+.= + ..+...+++.+++ +.+++.+ +++|.+...+ ..-+.+|+++
T Consensus 61 ~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~-~vpiSIDT~~-----~~V~~aAl~a 134 (297)
T 1tx2_A 61 EVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEV-KLPISIDTYK-----AEVAKQAIEA 134 (297)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHS-CSCEEEECSC-----HHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcC-CceEEEeCCC-----HHHHHHHHHc
Confidence 578888899999999999998873 2 2233345555555 6667665 4579997753 3566788889
Q ss_pred CCCEEeec
Q 012949 372 GISTVDCS 379 (452)
Q Consensus 372 Ga~~VD~S 379 (452)
|+++|+-.
T Consensus 135 Ga~iINdv 142 (297)
T 1tx2_A 135 GAHIINDI 142 (297)
T ss_dssp TCCEEEET
T ss_pred CCCEEEEC
Confidence 99999543
No 280
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A
Probab=87.80 E-value=3.3 Score=40.25 Aligned_cols=62 Identities=16% Similarity=0.019 Sum_probs=44.5
Q ss_pred cHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEe
Q 012949 229 YLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSC 290 (452)
Q Consensus 229 ~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~ 290 (452)
+.++++.+++.|+..||+.+.-..+......+.-.+..++.+.++|++|+++|+.|...+-.
T Consensus 30 ~~~d~~~i~~~G~n~vRi~i~~~~~~~~~~~g~~~~~~~~~l~~~v~~a~~~Gi~vildlh~ 91 (343)
T 1ceo_A 30 TEKDIETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSYIDRCLEWCKKYNLGLVLDMHH 91 (343)
T ss_dssp CHHHHHHHHHHTCCEEEEEEEGGGTBCSSSTTCBCHHHHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CHHHHHHHHHcCCCEEEecCCHHHhccccCCCcccHHHHHHHHHHHHHHHHCCCEEEEEecC
Confidence 34689999999999999987633221111112223567899999999999999999877665
No 281
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7
Probab=87.75 E-value=0.96 Score=46.69 Aligned_cols=147 Identities=18% Similarity=0.099 Sum_probs=88.4
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCc--EEEEEEeeecCCC---------C-C
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIP--VRGYVSCVVGCPV---------E-G 298 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~--V~~~l~~~~g~p~---------~-~ 298 (452)
+.+..++++|...|++=.|.+.. ..++-.+.+-..++..+++++|++. .. +.+.|.++.|.++ . +
T Consensus 108 e~i~~aI~aGFtSVMiD~S~~~~--~~~~pl~eNi~~~rt~elv~~Ah~~-~~~~~eaElG~vgG~Ev~v~~~~~~~~~~ 184 (420)
T 2fiq_A 108 ELVKAYVRAGFSKIHLDASMSCA--GDPIPLAPETVAERAAVLCFAAESV-ATDCQREQLSYVIGTEVPVPGGEASAIQS 184 (420)
T ss_dssp HHHHHHHHTTCCEEEECCCSCCB--TCCSSCCHHHHHHHHHHHHHHHHHH-CCHHHHHHCEEEEECSSCC----------
T ss_pred HHHHHHHHhCCCEEEECCCCCCC--CCCCCccHHHHHHHHHHHHHHHHHH-cccCCcccceEEeeeecCCCCCcccccCC
Confidence 47788999999999986554211 0011112222334468888998886 32 2122222233331 1 1
Q ss_pred --CCCHHHHHHHHH----HHHHCCcCE-----EEEcCCcCC-----CcHHHHHHHHHHHHHhCCCcc-EEEEeCCCcCcH
Q 012949 299 --AIPPSKVAYVAK----ELHDMGCFE-----ISLGDTIGV-----GTPGTVVPMLEAVMAVVPVEK-LAVHLHDTYGQS 361 (452)
Q Consensus 299 --r~d~e~l~~~a~----~l~~~Gad~-----I~L~DT~G~-----~~P~~v~~li~~l~~~~p~~~-l~vH~Hnd~GlA 361 (452)
.++|+...++++ .+.+.|+|. |.|+=.+|. ..|.-=.+.++.|++.++. | |.+-.|.+-|+.
T Consensus 185 ~~~T~PeeA~~Fve~~~~~~~~tGvd~~~~~vi~LAV~iGt~HG~y~~~~ld~e~l~~I~~~v~~-P~LVle~HGgSg~~ 263 (420)
T 2fiq_A 185 VHITHVEDAANTLRTHQKAFIARGLTEALTRVIAIVVQPGVEFDHSNIIHYQPQEAQALAQWIEN-TRMVYEAHSTDYQT 263 (420)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHTTTCHHHHHTEEEEECCCSCEECSSCEECCCGGGGHHHHHHHTT-SSCEEEESCCTTCC
T ss_pred CCCCCHHHHHHHHHHHHHHHHhhCCCcccccceEEEEeCCccCCCCCCCCcCHHHHHHHHHhcCC-CCEEEecCCCCCCC
Confidence 588998888887 677889765 335533332 1122222334444444433 4 777779999999
Q ss_pred HHHHHHHHHcCCCEEe-eccc
Q 012949 362 LPNILISLQMGISTVD-CSVA 381 (452)
Q Consensus 362 ~ANaLaAl~aGa~~VD-~Sv~ 381 (452)
-.+...+++.|+..|+ +|-.
T Consensus 264 ~e~l~~~v~~Gi~kiNV~t~l 284 (420)
T 2fiq_A 264 RTAYWELVRDHFAILKVGPAL 284 (420)
T ss_dssp HHHHHHHHHTTEEEEEECHHH
T ss_pred HHHHHHHHHcCCCEEEECHHH
Confidence 9999999999999888 4433
No 282
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=87.71 E-value=2 Score=42.36 Aligned_cols=82 Identities=15% Similarity=0.056 Sum_probs=68.8
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCcC---CCcHHHHHHHHHHHHHhCC-CccEEEEe-CCCcCcHHHHHHHHHHcC
Q 012949 298 GAIPPSKVAYVAKELHDMGCFEISLGDTIG---VGTPGTVVPMLEAVMAVVP-VEKLAVHL-HDTYGQSLPNILISLQMG 372 (452)
Q Consensus 298 ~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G---~~~P~~v~~li~~l~~~~p-~~~l~vH~-Hnd~GlA~ANaLaAl~aG 372 (452)
+..|.+.+.++++.+.+.|++.|.++-|+| .++.++-.++++.+++... .++|-++. +|+..-++..+..|-++|
T Consensus 38 g~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~G 117 (315)
T 3si9_A 38 GAIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAG 117 (315)
T ss_dssp SCBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcC
Confidence 578999999999999999999999999998 4678888888888887653 35666664 678888899999999999
Q ss_pred CCEEeec
Q 012949 373 ISTVDCS 379 (452)
Q Consensus 373 a~~VD~S 379 (452)
|+.|=..
T Consensus 118 adavlv~ 124 (315)
T 3si9_A 118 ADAVLVV 124 (315)
T ss_dssp CSEEEEE
T ss_pred CCEEEEC
Confidence 9977554
No 283
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=87.66 E-value=2.6 Score=41.24 Aligned_cols=115 Identities=15% Similarity=0.105 Sum_probs=80.6
Q ss_pred HHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHHHHHHCCcC-EEEEcCC-cCCCcHHHHHHHHHHHHHhCCCc
Q 012949 271 RAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCF-EISLGDT-IGVGTPGTVVPMLEAVMAVVPVE 348 (452)
Q Consensus 271 ~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad-~I~L~DT-~G~~~P~~v~~li~~l~~~~p~~ 348 (452)
+++.+.|++.|+-|-+ |. -.+.+.+..+++.+.+.+.. +|.+.-. ..+.....+..+++.+.+.++ +
T Consensus 7 ~~ll~~A~~~~yAv~A-----fN-----v~n~e~~~avl~AAe~~~sPvIlq~s~~~~~y~g~~~~~~~v~~~a~~~~-V 75 (286)
T 1gvf_A 7 KYLLQDAQANGYAVPA-----FN-----IHNAETIQAILEVCSEMRSPVILAGTPGTFKHIALEEIYALCSAYSTTYN-M 75 (286)
T ss_dssp HHHHHHHHHHTCCEEE-----EE-----CCSHHHHHHHHHHHHHHTCCCEEEECTTHHHHSCHHHHHHHHHHHHHHTT-S
T ss_pred HHHHHHHHHCCCEEEE-----Ee-----eCCHHHHHHHHHHHHHhCCCEEEECChhHHhhcCHHHHHHHHHHHHHhCC-C
Confidence 5677899999987742 21 13568888888888888866 5555443 233445677888888888776 4
Q ss_pred cEEEEeCCCcCcHHHHHHHHHHcCCC--EEeecccCCCCCCCCCCCCCc-ccHHHHHHHHHc
Q 012949 349 KLAVHLHDTYGQSLPNILISLQMGIS--TVDCSVAGLGGCPYAKGASGN-VATEDVVYMLSG 407 (452)
Q Consensus 349 ~l~vH~Hnd~GlA~ANaLaAl~aGa~--~VD~Sv~GlGecP~a~graGN-aalE~vv~~L~~ 407 (452)
|+.+|. |-|........|+++|.+ ++|+|-..+-| | .-|.+++...+.
T Consensus 76 PValHl--DHg~~~e~i~~ai~~GFtSVMiDgS~lp~ee---------Ni~~Tk~vv~~ah~ 126 (286)
T 1gvf_A 76 PLALHL--DHHESLDDIRRKVHAGVRSAMIDGSHFPFAE---------NVKLVKSVVDFCHS 126 (286)
T ss_dssp CBEEEE--EEECCHHHHHHHHHTTCCEEEECCTTSCHHH---------HHHHHHHHHHHHHH
T ss_pred cEEEEc--CCCCCHHHHHHHHHcCCCeEEECCCCCCHHH---------HHHHHHHHHHHHHH
Confidence 777765 455568999999999998 77999776655 4 345566666653
No 284
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=87.61 E-value=4.7 Score=39.69 Aligned_cols=82 Identities=13% Similarity=0.101 Sum_probs=69.1
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCcCC---CcHHHHHHHHHHHHHhCC-CccEEEEe-CCCcCcHHHHHHHHHHcC
Q 012949 298 GAIPPSKVAYVAKELHDMGCFEISLGDTIGV---GTPGTVVPMLEAVMAVVP-VEKLAVHL-HDTYGQSLPNILISLQMG 372 (452)
Q Consensus 298 ~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~li~~l~~~~p-~~~l~vH~-Hnd~GlA~ANaLaAl~aG 372 (452)
+..|.+-+.++++.+.+.|++.|.++-|+|= ++.++-.++++.+++... .++|-+|. +++..-++..+..|-++|
T Consensus 40 g~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~G 119 (315)
T 3na8_A 40 GGLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLG 119 (315)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcC
Confidence 5789999999999999999999999999995 678888889988888753 35666665 578888899999999999
Q ss_pred CCEEeec
Q 012949 373 ISTVDCS 379 (452)
Q Consensus 373 a~~VD~S 379 (452)
|+.+=..
T Consensus 120 adavlv~ 126 (315)
T 3na8_A 120 AEAVMVL 126 (315)
T ss_dssp CSEEEEC
T ss_pred CCEEEEC
Confidence 9977654
No 285
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=87.51 E-value=5.8 Score=38.72 Aligned_cols=83 Identities=17% Similarity=0.142 Sum_probs=69.1
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCcC---CCcHHHHHHHHHHHHHhCC-CccEEEEe-CCCcCcHHHHHHHHHHcC
Q 012949 298 GAIPPSKVAYVAKELHDMGCFEISLGDTIG---VGTPGTVVPMLEAVMAVVP-VEKLAVHL-HDTYGQSLPNILISLQMG 372 (452)
Q Consensus 298 ~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G---~~~P~~v~~li~~l~~~~p-~~~l~vH~-Hnd~GlA~ANaLaAl~aG 372 (452)
+..|.+.+.++++.+.+.|++.|.++-|+| .+++++-.++++.+++... .++|-++. +++..-++..+..|-++|
T Consensus 27 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~G 106 (303)
T 2wkj_A 27 QALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYG 106 (303)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCC
Confidence 578999999999999999999999999988 6788898999999888764 35676665 456777888888999999
Q ss_pred CCEEeecc
Q 012949 373 ISTVDCSV 380 (452)
Q Consensus 373 a~~VD~Sv 380 (452)
|+.+=..-
T Consensus 107 adavlv~~ 114 (303)
T 2wkj_A 107 FDAVSAVT 114 (303)
T ss_dssp CSEEEEEC
T ss_pred CCEEEecC
Confidence 99776553
No 286
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=87.46 E-value=14 Score=35.11 Aligned_cols=102 Identities=16% Similarity=0.189 Sum_probs=58.1
Q ss_pred HHHHHHHHhCCCc-EEEEEEeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCc------CC-------------Cc
Q 012949 271 RAVAHAAKVLSIP-VRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTI------GV-------------GT 330 (452)
Q Consensus 271 ~~~v~~Ak~~G~~-V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~------G~-------------~~ 330 (452)
.+..+.+|+.|-+ +..+|. .+-.+.+...++++.+.+.|+|.|-+.=.. |. .+
T Consensus 5 ~~~f~~~~~~~~~~~i~~i~-------~gdp~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~ 77 (268)
T 1qop_A 5 ENLFAQLNDRREGAFVPFVT-------LGDPGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVT 77 (268)
T ss_dssp HHHHHHHHHTTCCEEEEEEE-------TTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhcCCceEEEEee-------CCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCC
Confidence 3445555655554 344553 233456888999999999999987772111 11 12
Q ss_pred HHHHHHHHHHHHHhCCCccEEEEe-CCC-cCcHHHH-HHHHHHcCCCEEeec
Q 012949 331 PGTVVPMLEAVMAVVPVEKLAVHL-HDT-YGQSLPN-ILISLQMGISTVDCS 379 (452)
Q Consensus 331 P~~v~~li~~l~~~~p~~~l~vH~-Hnd-~GlA~AN-aLaAl~aGa~~VD~S 379 (452)
...+.++++.+++..+..|+.+=. -|. +-.++.. .-.+.++|++.|-.-
T Consensus 78 ~~~~~~~v~~ir~~~~~~Pv~lm~y~n~v~~~g~~~~~~~~~~aGadgii~~ 129 (268)
T 1qop_A 78 PAQCFEMLAIIREKHPTIPIGLLMYANLVFNNGIDAFYARCEQVGVDSVLVA 129 (268)
T ss_dssp HHHHHHHHHHHHHHCSSSCEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEET
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEEcccHHHHhhHHHHHHHHHHcCCCEEEEc
Confidence 344568899999884444544411 111 1122233 334668999966543
No 287
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=87.41 E-value=9.1 Score=36.06 Aligned_cols=139 Identities=15% Similarity=0.089 Sum_probs=87.6
Q ss_pred hHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHh-C-CCcEEEEEEeeecCCCCCCCCHHHHHHHH
Q 012949 232 GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKV-L-SIPVRGYVSCVVGCPVEGAIPPSKVAYVA 309 (452)
Q Consensus 232 ~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~-~-G~~V~~~l~~~~g~p~~~r~d~e~l~~~a 309 (452)
-.+.|.+.|+.-|-+.-. .++.+++ + |++ ++.+.|.|... .+.+.-+.-+
T Consensus 22 l~~~A~~~~~~aVcv~p~-----------------------~v~~a~~~l~gv~----v~tvigFP~G~-~~~~~k~~E~ 73 (226)
T 1vcv_A 22 GARKAEELGVAAYCVNPI-----------------------YAPVVRPLLRKVK----LCVVADFPFGA-LPTASRIALV 73 (226)
T ss_dssp HHHHHHHHTCSEEEECGG-----------------------GHHHHGGGCSSSE----EEEEESTTTCC-SCHHHHHHHH
T ss_pred HHHHHHHhCCCEEEECHH-----------------------HHHHHHHHhCCCe----EEEEeCCCCCC-CchHHHHHHH
Confidence 567788888887775421 1234443 2 332 44556777654 4555555566
Q ss_pred HHHHHCCcCEEEEcCCcC---CCcHHHHHHHHHHHHHhCCC--cc--EEEEeCCCcCcHHHHHHHHHHcCCCEEeeccc-
Q 012949 310 KELHDMGCFEISLGDTIG---VGTPGTVVPMLEAVMAVVPV--EK--LAVHLHDTYGQSLPNILISLQMGISTVDCSVA- 381 (452)
Q Consensus 310 ~~l~~~Gad~I~L~DT~G---~~~P~~v~~li~~l~~~~p~--~~--l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~Sv~- 381 (452)
+. .+.||+.|-+.=-+| ...-..+.+-|+.+++..+. ++ |+...=++ -.=...+..|+++|||+|=+|-+
T Consensus 74 ~~-i~~GAdEID~Vinig~~~~g~~~~v~~ei~~v~~a~~~~~lKvIlEt~~Lt~-eei~~a~~ia~eaGADfVKTSTGf 151 (226)
T 1vcv_A 74 SR-LAEVADEIDVVAPIGLVKSRRWAEVRRDLISVVGAAGGRVVKVITEEPYLRD-EERYTLYDIIAEAGAHFIKSSTGF 151 (226)
T ss_dssp HH-HTTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCH-HHHHHHHHHHHHHTCSEEECCCSC
T ss_pred HH-HHCCCCEEEEecchhhhcCCCHHHHHHHHHHHHHHHcCCCceEEEeccCCCH-HHHHHHHHHHHHcCCCEEEeCCCC
Confidence 67 889999998888788 45567888888998887653 22 22111122 12234567788999999999842
Q ss_pred -------CCCCCCCCCCCCCcccHHHHHHHHHc
Q 012949 382 -------GLGGCPYAKGASGNVATEDVVYMLSG 407 (452)
Q Consensus 382 -------GlGecP~a~graGNaalE~vv~~L~~ 407 (452)
++|. +|++.+|++-.+.+.
T Consensus 152 ~~~~~~~~~~~-------~~gAt~~dv~lm~~~ 177 (226)
T 1vcv_A 152 AEEAYAARQGN-------PVHSTPERAAAIARY 177 (226)
T ss_dssp CCHHHHHHTTC-------CSSCCHHHHHHHHHH
T ss_pred CccccccccCC-------CCCCCHHHHHHHHHH
Confidence 1222 467888888766654
No 288
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=87.37 E-value=1.5 Score=44.21 Aligned_cols=88 Identities=19% Similarity=0.284 Sum_probs=66.8
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEeec
Q 012949 300 IPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCS 379 (452)
Q Consensus 300 ~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~S 379 (452)
.|.+..++.++++.++||+.|+++ +-++ +..+.++.+++..+ +||..-.|-|+-+|++ |+++|++.+ .
T Consensus 43 ~D~~atv~Qi~~l~~aG~diVRva----vp~~-~~a~al~~I~~~~~-vPlvaDiHf~~~lal~----a~e~G~dkl--R 110 (366)
T 3noy_A 43 HDVEATLNQIKRLYEAGCEIVRVA----VPHK-EDVEALEEIVKKSP-MPVIADIHFAPSYAFL----SMEKGVHGI--R 110 (366)
T ss_dssp TCHHHHHHHHHHHHHTTCCEEEEE----CCSH-HHHHHHHHHHHHCS-SCEEEECCSCHHHHHH----HHHTTCSEE--E
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeC----CCCh-HHHHHHHHHHhcCC-CCEEEeCCCCHHHHHH----HHHhCCCeE--E
Confidence 578888999999999999999883 3333 44677899999886 5899999999988765 899999974 3
Q ss_pred ccCCCCCCCCCCCCCcc----cHHHHHHHHHcCCC
Q 012949 380 VAGLGGCPYAKGASGNV----ATEDVVYMLSGLGV 410 (452)
Q Consensus 380 v~GlGecP~a~graGNa----alE~vv~~L~~~Gi 410 (452)
|+ .||. -.++|+...++.|+
T Consensus 111 IN-----------PGNig~~~~~~~vv~~ak~~~~ 134 (366)
T 3noy_A 111 IN-----------PGNIGKEEIVREIVEEAKRRGV 134 (366)
T ss_dssp EC-----------HHHHSCHHHHHHHHHHHHHHTC
T ss_pred EC-----------CcccCchhHHHHHHHHHHHcCC
Confidence 44 3444 46778887776554
No 289
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=87.36 E-value=4 Score=39.76 Aligned_cols=78 Identities=14% Similarity=0.171 Sum_probs=51.0
Q ss_pred CCC-CCHHHHHHHHHHHHHCCcCEEEEcC-Cc--C---CCcHHHH---HHHHHHHHHhCCCccEEEEeCCCcCcHHHHHH
Q 012949 297 EGA-IPPSKVAYVAKELHDMGCFEISLGD-TI--G---VGTPGTV---VPMLEAVMAVVPVEKLAVHLHDTYGQSLPNIL 366 (452)
Q Consensus 297 ~~r-~d~e~l~~~a~~l~~~Gad~I~L~D-T~--G---~~~P~~v---~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaL 366 (452)
.++ .+++.+.+.++.+.+.|||.|-+.= ++ | +...+++ ...|+.+++. +++|.++..+ ..-+.
T Consensus 22 gg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~--~~piSIDT~~-----~~va~ 94 (280)
T 1eye_A 22 GGCYLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ--GITVSIDTMR-----ADVAR 94 (280)
T ss_dssp SCCCCSHHHHHHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHT--TCCEEEECSC-----HHHHH
T ss_pred CcccCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcC--CCEEEEeCCC-----HHHHH
Confidence 344 4789999999999999999998873 21 1 1123444 4445555543 5689998765 35667
Q ss_pred HHHHcCCCEEeeccc
Q 012949 367 ISLQMGISTVDCSVA 381 (452)
Q Consensus 367 aAl~aGa~~VD~Sv~ 381 (452)
+|+++|+++|+-.-+
T Consensus 95 aAl~aGa~iINdvsg 109 (280)
T 1eye_A 95 AALQNGAQMVNDVSG 109 (280)
T ss_dssp HHHHTTCCEEEETTT
T ss_pred HHHHcCCCEEEECCC
Confidence 899999999965433
No 290
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=87.29 E-value=2.3 Score=41.46 Aligned_cols=73 Identities=19% Similarity=0.207 Sum_probs=52.8
Q ss_pred CHHHHHHHHHHHHHCCcCEEEEcC-Cc--C---CC---cHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHc
Q 012949 301 PPSKVAYVAKELHDMGCFEISLGD-TI--G---VG---TPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQM 371 (452)
Q Consensus 301 d~e~l~~~a~~l~~~Gad~I~L~D-T~--G---~~---~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~a 371 (452)
+++.+.+.++.+.+.|||.|-+.= ++ | +. ...++..+|+.+++++ +.+|.+++.+ ..-+.+|+++
T Consensus 36 ~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~-~~piSIDT~~-----~~va~aAl~a 109 (282)
T 1aj0_A 36 SLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRF-EVWISVDTSK-----PEVIRESAKV 109 (282)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHC-CCEEEEECCC-----HHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhc-CCeEEEeCCC-----HHHHHHHHHc
Confidence 578899999999999999998875 32 2 11 1234566677777666 4689998765 3566789999
Q ss_pred CCCEEeec
Q 012949 372 GISTVDCS 379 (452)
Q Consensus 372 Ga~~VD~S 379 (452)
|+++|+-.
T Consensus 110 Ga~iINdv 117 (282)
T 1aj0_A 110 GAHIINDI 117 (282)
T ss_dssp TCCEEEET
T ss_pred CCCEEEEC
Confidence 99999643
No 291
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=87.24 E-value=6 Score=38.66 Aligned_cols=83 Identities=23% Similarity=0.136 Sum_probs=69.2
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCcC---CCcHHHHHHHHHHHHHhCCC-ccEEEE-eCCCcCcHHHHHHHHHHcC
Q 012949 298 GAIPPSKVAYVAKELHDMGCFEISLGDTIG---VGTPGTVVPMLEAVMAVVPV-EKLAVH-LHDTYGQSLPNILISLQMG 372 (452)
Q Consensus 298 ~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G---~~~P~~v~~li~~l~~~~p~-~~l~vH-~Hnd~GlA~ANaLaAl~aG 372 (452)
+..|.+.+.++++.+.+.|++.|.++-|+| .+++++-.++++.+++...+ ++|-++ .+|+..-++..+..|-++|
T Consensus 32 g~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~G 111 (304)
T 3cpr_A 32 GDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAG 111 (304)
T ss_dssp SCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcC
Confidence 578999999999999999999999999988 67888888999988877643 556554 5667888889999999999
Q ss_pred CCEEeecc
Q 012949 373 ISTVDCSV 380 (452)
Q Consensus 373 a~~VD~Sv 380 (452)
|+.+=..-
T Consensus 112 adavlv~~ 119 (304)
T 3cpr_A 112 ADGLLVVT 119 (304)
T ss_dssp CSEEEEEC
T ss_pred CCEEEECC
Confidence 99776553
No 292
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=87.23 E-value=12 Score=36.60 Aligned_cols=189 Identities=13% Similarity=0.108 Sum_probs=108.6
Q ss_pred hhHHHHHhhhcCCCCccEEEeCCccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccC--------CH
Q 012949 111 DIRDITNKFLKGIPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLA--------DA 182 (452)
Q Consensus 111 ~~~~~~~~~~~~~p~~V~I~D~TLRDG~Q~~~~~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~--------D~ 182 (452)
-..+|++++++-.++-..+-=+ |+.- -+-.+ -.+.+.|.++|+.-+ +-|+..--+-.+++ -.
T Consensus 80 iv~e~~~evlp~v~~iPV~Agv---~~~D---P~~~~---g~~Le~lk~~Gf~Gv-~N~ptvglidG~fr~~LEE~gm~~ 149 (286)
T 2p10_A 80 IVVDMAREVLPVVRHTPVLAGV---NGTD---PFMVM---STFLRELKEIGFAGV-QNFPTVGLIDGLFRQNLEETGMSY 149 (286)
T ss_dssp HHHHHHHHHGGGCSSSCEEEEE---CTTC---TTCCH---HHHHHHHHHHTCCEE-EECSCGGGCCHHHHHHHHHTTCCH
T ss_pred HHHHHHHhhhccCCCCCEEEEE---CCcC---CCcCH---HHHHHHHHHhCCceE-EECCCcccccchhhhhHhhcCCCH
Confidence 5678899999876653222212 2211 11233 334499999999999 87752110000000 12
Q ss_pred HHHHHHHHhc--cCCceeEEecchhhhhhhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChH-HHhhhc
Q 012949 183 RDVMEAVRDL--EGARLPVLTPNLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEA-FSKSNI 259 (452)
Q Consensus 183 e~v~~~i~~~--~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~-~~~~~~ 259 (452)
+++.+.++.. .+.-..+.+.+. ++.+++.++|.|.|-+-.+...- .+-...
T Consensus 150 ~~eve~I~~A~~~gL~Ti~~v~~~--------------------------eeA~amA~agpDiI~~h~glT~gglIG~~~ 203 (286)
T 2p10_A 150 AQEVEMIAEAHKLDLLTTPYVFSP--------------------------EDAVAMAKAGADILVCHMGLTTGGAIGARS 203 (286)
T ss_dssp HHHHHHHHHHHHTTCEECCEECSH--------------------------HHHHHHHHHTCSEEEEECSCC---------
T ss_pred HHHHHHHHHHHHCCCeEEEecCCH--------------------------HHHHHHHHcCCCEEEECCCCCCCCcccCCC
Confidence 3344444432 232222233332 37778889999999888774321 112234
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHH-HHHHH
Q 012949 260 NCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGT-VVPML 338 (452)
Q Consensus 260 ~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~-v~~li 338 (452)
..|.+++.+.+.++++.+|+..-.|. -|++ |.|. .+++++.++.+.. .|++-+..+-++--+.|++ +.+++
T Consensus 204 avs~~~~~e~i~~i~~a~~~vnpdvi-vLc~--gGpI---stpeDv~~~l~~t--~G~~G~~gASsier~p~e~ai~~~~ 275 (286)
T 2p10_A 204 GKSMDDCVSLINECIEAARTIRDDII-ILSH--GGPI---ANPEDARFILDSC--QGCHGFYGASSMERLPAEEAIRSQT 275 (286)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHCSCCE-EEEE--STTC---CSHHHHHHHHHHC--TTCCEEEESHHHHHHHHHHHHHHHH
T ss_pred cccHHHhHHHHHHHHHHHHHhCCCcE-EEec--CCCC---CCHHHHHHHHhcC--CCccEEEeehhhhcCCHHHHHHHHH
Confidence 46888988999999999999776654 2332 2233 4678887766532 2789999888777766554 56666
Q ss_pred HHHHH
Q 012949 339 EAVMA 343 (452)
Q Consensus 339 ~~l~~ 343 (452)
+.+|.
T Consensus 276 ~~fk~ 280 (286)
T 2p10_A 276 LAFKA 280 (286)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 66665
No 293
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=87.12 E-value=7.1 Score=38.11 Aligned_cols=71 Identities=20% Similarity=0.249 Sum_probs=53.9
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEEcCCcC-----------CCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHH
Q 012949 300 IPPSKVAYVAKELHDMGCFEISLGDTIG-----------VGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILIS 368 (452)
Q Consensus 300 ~d~e~l~~~a~~l~~~Gad~I~L~DT~G-----------~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaA 368 (452)
.+++.+.+.++.+.+.|++.|.+.-+-| ..+++.+.++++..++. +.++.+|+|.+. ....+
T Consensus 164 ~~~~~~~~~~~~~~~~g~~~ik~~~~G~~~~~~~~~~~~~~~~e~l~~~~~~A~~~--g~~v~~H~~~~~-----~i~~~ 236 (403)
T 3gnh_A 164 DSPDEARKAVRTLKKYGAQVIKICATGGVFSRGNEPGQQQLTYEEMKAVVDEAHMA--GIKVAAHAHGAS-----GIREA 236 (403)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTTCBCSCHHHHHHHHHHHHHT--TCEEEEEECSHH-----HHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeecCCcCCCCCCCccccCCHHHHHHHHHHHHHC--CCEEEEEeCCHH-----HHHHH
Confidence 3567888889999999999888765433 47889999998887763 357889998764 35677
Q ss_pred HHcCCCEEe
Q 012949 369 LQMGISTVD 377 (452)
Q Consensus 369 l~aGa~~VD 377 (452)
+++|++.|.
T Consensus 237 ~~~g~~~i~ 245 (403)
T 3gnh_A 237 VRAGVDTIE 245 (403)
T ss_dssp HHTTCSEEE
T ss_pred HHhCCCEEe
Confidence 889988653
No 294
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=87.12 E-value=4.5 Score=41.36 Aligned_cols=126 Identities=13% Similarity=0.207 Sum_probs=68.9
Q ss_pred HHHHHHHHHCCCCEEEEecC-CCCCcccccCCHHHHHHHHHhccCCceeEEecchhhhhhhhhhhhhccchhhhhhhhcc
Q 012949 151 VELIRRLVSSGLPVVEATSF-VSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLWVY 229 (452)
Q Consensus 151 ~~i~~~L~~~Gv~~IEvG~~-~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~~~ 229 (452)
.+.++.|.++|++.|.+.+. ..|. ...+.++.+++..+.. +++.+.. +
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~~~------~~~e~I~~ik~~~~i~--Vi~g~V~-----------------------t 194 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGHSL------NIIRTLKEIKSKMNID--VIVGNVV-----------------------T 194 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCSBH------HHHHHHHHHHTTCCCE--EEEEEEC-----------------------S
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcc------cHHHHHHHHHhcCCCe--EEEeecC-----------------------C
Confidence 68899999999999998532 2221 1123344444322333 3322211 2
Q ss_pred HHhHHHHHHcCCCEEEEEecCChHHHhh---hcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHH
Q 012949 230 LQGFEAAIAAGAKEVAIFASASEAFSKS---NINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVA 306 (452)
Q Consensus 230 ~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~---~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~ 306 (452)
.+..+.+.++|+|.|.+....-..+... ..+.. .+..+.++.+.+++.+++|.+ +.+-.+++.+.
T Consensus 195 ~e~A~~a~~aGAD~I~vG~g~Gs~~~tr~~~g~g~p---~~~al~~v~~~~~~~~IPVIA---------~GGI~~~~di~ 262 (400)
T 3ffs_A 195 EEATKELIENGADGIKVGIGPGSICTTRIVAGVGVP---QITAIEKCSSVASKFGIPIIA---------DGGIRYSGDIG 262 (400)
T ss_dssp HHHHHHHHHTTCSEEEECC---------CCSCBCCC---HHHHHHHHHHHHTTTTCCEEE---------ESCCCSHHHHH
T ss_pred HHHHHHHHHcCCCEEEEeCCCCcCcccccccccchh---HHHHHHHHHHHHHhcCCCEEe---------cCCCCCHHHHH
Confidence 3578889999999999842111111111 01122 244455666666667888752 23444566555
Q ss_pred HHHHHHHHCCcCEEEEc
Q 012949 307 YVAKELHDMGCFEISLG 323 (452)
Q Consensus 307 ~~a~~l~~~Gad~I~L~ 323 (452)
+. .++||+.|.+.
T Consensus 263 ka----lalGAd~V~vG 275 (400)
T 3ffs_A 263 KA----LAVGASSVMIG 275 (400)
T ss_dssp HH----HTTTCSEEEEC
T ss_pred HH----HHcCCCEEEEC
Confidence 43 45799988874
No 295
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=87.07 E-value=4.1 Score=37.94 Aligned_cols=196 Identities=9% Similarity=-0.032 Sum_probs=104.5
Q ss_pred HHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEecchhhhhhhhhhhhhccchhhhhhhhccH
Q 012949 151 VELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLWVYL 230 (452)
Q Consensus 151 ~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~~~~ 230 (452)
.+.++.+.++|++.||+..... .|. .+.+++.+.+++ .++++....+. . + |.. ...+-+ ...
T Consensus 26 ~~~l~~a~~~G~~~vEl~~~~~---~~~-~~~~~~~~~l~~-~gl~i~~~~~~-~-~------~~~-~~~~~~----~~~ 87 (264)
T 1yx1_A 26 ASFLPLLAMAGAQRVELREELF---AGP-PDTEALTAAIQL-QGLECVFSSPL-E-L------WRE-DGQLNP----ELE 87 (264)
T ss_dssp GGGHHHHHHHTCSEEEEEGGGC---SSC-CCHHHHHHHHHH-TTCEEEEEEEE-E-E------ECT-TSSBCT----THH
T ss_pred HHHHHHHHHcCCCEEEEEHHhc---CCC-HHHHHHHHHHHH-cCCEEEEecch-h-h------cCC-chhHHH----HHH
Confidence 4567788899999999974311 111 145555555554 35555444332 1 0 110 000001 123
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 310 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~ 310 (452)
+.++.|.+.|++.|.+....... . ..+.++.++|++.|+.+. +... +...-.+++.+.++++
T Consensus 88 ~~i~~A~~lGa~~v~~~~g~~~~----------~---~~l~~l~~~a~~~Gv~l~--lEn~---~~~~~~~~~~~~~ll~ 149 (264)
T 1yx1_A 88 PTLRRAEACGAGWLKVSLGLLPE----------Q---PDLAALGRRLARHGLQLL--VEND---QTPQGGRIEVLERFFR 149 (264)
T ss_dssp HHHHHHHHTTCSEEEEEEECCCS----------S---CCHHHHHHHHTTSSCEEE--EECC---SSHHHHCHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEecCCCCc----------H---HHHHHHHHHHHhcCCEEE--EecC---CCCCCCCHHHHHHHHH
Confidence 47889999999999987643211 0 145677888999997654 3321 0000125677777777
Q ss_pred HHHHCCcCEEEEcCCcCCC-cHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEeecccCCCCCCCC
Q 012949 311 ELHDMGCFEISLGDTIGVG-TPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCSVAGLGGCPYA 389 (452)
Q Consensus 311 ~l~~~Gad~I~L~DT~G~~-~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~Sv~GlGecP~a 389 (452)
.+.+.+...=..-||.-.. ......+.++.+..+ -..+|.+|..+-. +-+... ..+|
T Consensus 150 ~v~~~~~~vg~~~D~g~~~~~~~d~~~~~~~~~~~----i~~vHlkD~~~~~----------~~~~~~---~~~G----- 207 (264)
T 1yx1_A 150 LAERQQLDLAMTFDIGNWRWQEQAADEAALRLGRY----VGYVHCKAVIRNR----------DGKLVA---VPPS----- 207 (264)
T ss_dssp HHHHTTCSEEEEEETTGGGGGTCCHHHHHHHHGGG----EEEEEECEEEECT----------TSCEEE---ECCC-----
T ss_pred HHHhcCCCeEEEEehhhhhhcCCCHHHHHHHhhhh----EEEEEeecccCCC----------CCceee---ECCC-----
Confidence 7755554422333883222 122333444444322 3678998865421 111111 1233
Q ss_pred CCCCCc-ccHHHHHHHHHc
Q 012949 390 KGASGN-VATEDVVYMLSG 407 (452)
Q Consensus 390 ~graGN-aalE~vv~~L~~ 407 (452)
.|. .+...++..|+.
T Consensus 208 ---~G~~id~~~~~~~L~~ 223 (264)
T 1yx1_A 208 ---AADLQYWQRLLQHFPE 223 (264)
T ss_dssp ---HHHHHHHHHHHTTSCT
T ss_pred ---CCCccCHHHHHHHhhc
Confidence 478 888888888875
No 296
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=87.07 E-value=12 Score=36.72 Aligned_cols=107 Identities=14% Similarity=0.131 Sum_probs=76.4
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 310 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~ 310 (452)
+.++..++.|++.|-+.-+..|. ...|.+|-.+-++.+++.++. .++|.+.+ +..+.+...++++
T Consensus 48 ~lv~~li~~Gv~Gl~v~GtTGE~-----~~Ls~~Er~~v~~~~v~~~~g-rvpViaGv---------g~~st~eai~la~ 112 (314)
T 3qze_A 48 KLVDFHLQEGTNAIVAVGTTGES-----ATLDVEEHIQVIRRVVDQVKG-RIPVIAGT---------GANSTREAVALTE 112 (314)
T ss_dssp HHHHHHHHHTCCEEEESSGGGTG-----GGCCHHHHHHHHHHHHHHHTT-SSCEEEEC---------CCSSHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECccccCh-----hhCCHHHHHHHHHHHHHHhCC-CCcEEEeC---------CCcCHHHHHHHHH
Confidence 36677788999999888777775 346788877777777777654 35554211 2346788899999
Q ss_pred HHHHCCcCEEEEc-CCcCCCcHHHHHHHHHHHHHhCCCccEEEE
Q 012949 311 ELHDMGCFEISLG-DTIGVGTPGTVVPMLEAVMAVVPVEKLAVH 353 (452)
Q Consensus 311 ~l~~~Gad~I~L~-DT~G~~~P~~v~~li~~l~~~~p~~~l~vH 353 (452)
.+.++|+|.+.+. =..--.+++.+.+.++.+.+..+ .||-++
T Consensus 113 ~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~-lPiilY 155 (314)
T 3qze_A 113 AAKSGGADACLLVTPYYNKPTQEGMYQHFRHIAEAVA-IPQILY 155 (314)
T ss_dssp HHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHSC-SCEEEE
T ss_pred HHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcC-CCEEEE
Confidence 9999999966554 33445677889999999988874 355553
No 297
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=87.01 E-value=31 Score=35.84 Aligned_cols=228 Identities=13% Similarity=0.059 Sum_probs=125.5
Q ss_pred CCHHHHHHHHH-HHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhc-cCCceeEEecchhhhhhhhhhhhhccchhh
Q 012949 145 VPTGVKVELIR-RLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDL-EGARLPVLTPNLKVILQRSILFQQCHASVI 222 (452)
Q Consensus 145 ~~~~~k~~i~~-~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~-~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i 222 (452)
++..++..|.. ...+.|+|.|-+.|-.++ .|..++.+.+... ....+.+-+-+..
T Consensus 179 lTekD~~dl~~~~~~~~~vD~Ia~SfVr~a------~Dv~~~r~~l~~~g~~~~iiaKIE~~e----------------- 235 (461)
T 3qtg_A 179 PAEEDVEALKAISPIRDNIDYVAISLAKSC------KDVDSVRSLLTELGFQSQVAVKIETKG----------------- 235 (461)
T ss_dssp SCHHHHHHHHHHGGGGGGCCEEEECSCCSH------HHHHHHHHHHHHTTCCCEEEEEECSHH-----------------
T ss_pred CCHHHHHHHHHHHHhhcCCCEEEecCCCCH------HHHHHHHHHHHhcCCCceEEEEECCHH-----------------
Confidence 56677666642 667889999998653322 1333334444332 1233333332221
Q ss_pred hhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCC-CCCCC
Q 012949 223 SSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPV-EGAIP 301 (452)
Q Consensus 223 ~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~-~~r~d 301 (452)
-.+.++..++. .|.|.|.- .|.-. -...++.....+++++.|+++|.+|...-.+ .-+.. ..+.+
T Consensus 236 ------av~nldeIl~~-sDgImVaR--GDLgv----ei~~e~v~~~Qk~ii~~~~~~gkpvi~ATQM-LeSMi~~p~PT 301 (461)
T 3qtg_A 236 ------AVNNLEELVQC-SDYVVVAR--GDLGL----HYGLDALPIVQRRIVHTSLKYGKPIAVATQL-LDSMQSSPIPT 301 (461)
T ss_dssp ------HHHTHHHHHHT-CSEEEEEH--HHHTT----TSCTTTHHHHHHHHHHHHHHTTCCEEEESSS-SGGGGTCSSCC
T ss_pred ------HHHhHHHHHHh-cccEEEcc--ccccc----cCCHHHHHHHHHHHHHHHHHhCCCEEEeccc-hHhhccCCCcc
Confidence 11245555555 57666642 23211 1234455666678999999999997521111 10111 12345
Q ss_pred HHHHHHHHHHHHHCCcCEEEEc-CCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCc--CcHHHHHHHHHHcCCCEEee
Q 012949 302 PSKVAYVAKELHDMGCFEISLG-DTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTY--GQSLPNILISLQMGISTVDC 378 (452)
Q Consensus 302 ~e~l~~~a~~l~~~Gad~I~L~-DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~--GlA~ANaLaAl~aGa~~VD~ 378 (452)
..++.+++.+..+ |+|.|.|. .|+-.-.|-+..+++..+..+.-...-.++...+. ..|.|...+|-..+|.+|-.
T Consensus 302 RAEvsDVanAV~d-GaDavMLSgETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~aia~aa~~~a~~~~a~Iv~~ 380 (461)
T 3qtg_A 302 RAEINDVFTTASM-GVDSLWLTNETASGKYPLAAVSWLSRILMNVEYQIPQSPLLQNSRDRFAKGLVELAQDLGANILVF 380 (461)
T ss_dssp HHHHHHHHHHHHT-TCSEEEECHHHHTSSCHHHHHHHHHHHHHTCCCCCCCCCCCCSHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHHHh-CCcEEEEcccccCCCCHHHHHHHHHHHHHHHHhhhhhccCCCCHHHHHHHHHHHHHHhcCCCEEEE
Confidence 6788888887765 99999997 57777799998888888887653211011111122 23344455566778887777
Q ss_pred cccCCCC------CCCCCCCCCcccHHHHHHHHHcC-CCC
Q 012949 379 SVAGLGG------CPYAKGASGNVATEDVVYMLSGL-GVE 411 (452)
Q Consensus 379 Sv~GlGe------cP~a~graGNaalE~vv~~L~~~-Gi~ 411 (452)
|-.|--. .|-+|- -..++-+.+...|.-+ |+.
T Consensus 381 T~SG~tA~~vsr~RP~~pI-ia~T~~~~~~r~l~l~~GV~ 419 (461)
T 3qtg_A 381 SMSGTLARRIAKFRPRGVV-YVGTPNVRVARSLSIVWALE 419 (461)
T ss_dssp CSSSHHHHHHHTTCCSSCE-EEEESCHHHHHHHTTSTTEE
T ss_pred CCCcHHHHHHHhhCCCCCE-EEeCCCHHHHhhceeccceE
Confidence 7776321 111111 1235567777777643 654
No 298
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=86.93 E-value=5.3 Score=39.65 Aligned_cols=82 Identities=10% Similarity=0.005 Sum_probs=68.7
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCcC---CCcHHHHHHHHHHHHHhCCC-ccEEEE-eCCCcCcHHHHHHHHHHcC
Q 012949 298 GAIPPSKVAYVAKELHDMGCFEISLGDTIG---VGTPGTVVPMLEAVMAVVPV-EKLAVH-LHDTYGQSLPNILISLQMG 372 (452)
Q Consensus 298 ~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G---~~~P~~v~~li~~l~~~~p~-~~l~vH-~Hnd~GlA~ANaLaAl~aG 372 (452)
+..|.+.+.++++.+.+.|++.|.++-|+| .+++++-.++++.+++...+ ++|-++ .+|+..-++..+..|-++|
T Consensus 50 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~G 129 (332)
T 2r8w_A 50 GRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAAG 129 (332)
T ss_dssp CCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcC
Confidence 578999999999999999999999999998 67888989999998887643 556554 5567788888999999999
Q ss_pred CCEEeec
Q 012949 373 ISTVDCS 379 (452)
Q Consensus 373 a~~VD~S 379 (452)
||.|=..
T Consensus 130 adavlv~ 136 (332)
T 2r8w_A 130 ADALLLA 136 (332)
T ss_dssp CSEEEEC
T ss_pred CCEEEEC
Confidence 9987554
No 299
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=86.90 E-value=9 Score=38.47 Aligned_cols=68 Identities=16% Similarity=0.128 Sum_probs=50.1
Q ss_pred HHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEeecc
Q 012949 306 AYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCSV 380 (452)
Q Consensus 306 ~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~Sv 380 (452)
.+.++.+.++|+|.|.| |+. ...|..+.+.++.+++.++ +++.+..= .....+..++++|||.|.+++
T Consensus 107 ~e~a~~l~eaGad~I~l-d~a-~G~~~~~~~~i~~i~~~~~-~~Vivg~v----~t~e~A~~l~~aGaD~I~VG~ 174 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVL-DSA-HGHSLNIIRTLKEIKSKMN-IDVIVGNV----VTEEATKELIENGADGIKVGI 174 (361)
T ss_dssp HHHHHHHHHTTCSEEEE-CCS-CCSBHHHHHHHHHHHHHCC-CEEEEEEE----CSHHHHHHHHHTTCSEEEECS
T ss_pred HHHHHHHHHcCcCeEEE-eCC-CCCcHHHHHHHHHHHHhcC-CcEEEccC----CCHHHHHHHHHcCcCEEEEec
Confidence 56788889999999887 433 3467888899999999884 45655211 234567888999999999843
No 300
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=86.89 E-value=0.97 Score=43.50 Aligned_cols=170 Identities=15% Similarity=0.094 Sum_probs=97.1
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEecchhhhhhhhhhhhhccchhhhh
Q 012949 145 VPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISS 224 (452)
Q Consensus 145 ~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~ 224 (452)
++...-..+.+...+. ||.+-+|+..+. +.+.+.+.+.+.......+.+. |+-. ++... +.+
T Consensus 23 lg~~~~~d~Le~~g~y-ID~lKfg~Gt~~-----l~~~~~l~eki~l~~~~gV~v~-~GGT-l~E~~--~~q-------- 84 (251)
T 1qwg_A 23 LPPKFVEDYLKVCGDY-IDFVKFGWGTSA-----VIDRDVVKEKINYYKDWGIKVY-PGGT-LFEYA--YSK-------- 84 (251)
T ss_dssp CCHHHHHHHHHHHGGG-CSEEEECTTGGG-----GSCHHHHHHHHHHHHTTTCEEE-ECHH-HHHHH--HHT--------
T ss_pred CCHHHHHHHHHHhhhh-cceEEecCceee-----ecCHHHHHHHHHHHHHcCCeEE-CCcH-HHHHH--HHc--------
Confidence 5666666665554443 888899876432 1223334444443222222221 2210 01100 000
Q ss_pred hhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCC---CCCC
Q 012949 225 NLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVE---GAIP 301 (452)
Q Consensus 225 ~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~---~r~d 301 (452)
-...+-++.+.+.|.+.|-|....-++ + .+.-.++|+.+++.|++|-.. +|.-+. ...+
T Consensus 85 --g~~~~yl~~~k~lGf~~iEiS~G~i~l--------~----~~~~~~~I~~~~~~G~~v~~E----vG~k~~~~~~~~~ 146 (251)
T 1qwg_A 85 --GKFDEFLNECEKLGFEAVEISDGSSDI--------S----LEERNNAIKRAKDNGFMVLTE----VGKKMPDKDKQLT 146 (251)
T ss_dssp --TCHHHHHHHHHHHTCCEEEECCSSSCC--------C----HHHHHHHHHHHHHTTCEEEEE----ECCSSHHHHTTCC
T ss_pred --CcHHHHHHHHHHcCCCEEEECCCcccC--------C----HHHHHHHHHHHHHCCCEEeee----ccccCCcccCCCC
Confidence 012357888999999999998754442 1 244457889999999998533 343332 3578
Q ss_pred HHHHHHHHHHHHHCCcCEEEEc-----------CCcCCCcHHHHHHHHHHHHHhCCCccEEEEe
Q 012949 302 PSKVAYVAKELHDMGCFEISLG-----------DTIGVGTPGTVVPMLEAVMAVVPVEKLAVHL 354 (452)
Q Consensus 302 ~e~l~~~a~~l~~~Gad~I~L~-----------DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~ 354 (452)
++.+.+.++...++||+.|.+- |..|-.....+. .+.+++|..+|-|-+
T Consensus 147 ~~~~I~~~~~~LeAGA~~ViiEarEsG~~iGi~~~~g~~r~d~v~----~i~~~l~~eklifEA 206 (251)
T 1qwg_A 147 IDDRIKLINFDLDAGADYVIIEGRESGKGKGLFDKEGKVKENELD----VLAKNVDINKVIFEA 206 (251)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCTTTCCSSTTBCTTSCBCHHHHH----HHHTTSCGGGEEEEC
T ss_pred HHHHHHHHHHHHHCCCcEEEEeeecccCCcccCCCCCCCcHHHHH----HHHHhCChhhEEEEC
Confidence 9999999999999999877663 334444444444 444444544455544
No 301
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=86.84 E-value=11 Score=35.18 Aligned_cols=115 Identities=14% Similarity=0.006 Sum_probs=65.4
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCH-------H
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPP-------S 303 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~-------e 303 (452)
+.++.+.+.|.+.|.+.... . ...+ -..+.++.+.+++.|+++............. ..++ +
T Consensus 21 ~~l~~~~~~G~~~vEl~~~~--~-----~~~~----~~~~~~~~~~l~~~gl~i~~~~~~~~~~~l~-~~d~~~r~~~~~ 88 (294)
T 3vni_A 21 YYIEKVAKLGFDILEIAASP--L-----PFYS----DIQINELKACAHGNGITLTVGHGPSAEQNLS-SPDPDIRKNAKA 88 (294)
T ss_dssp HHHHHHHHHTCSEEEEESTT--G-----GGCC----HHHHHHHHHHHHHTTCEEEEEECCCGGGCTT-CSCHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEecCcc--c-----CCcC----HHHHHHHHHHHHHcCCeEEEeecCCCCcCCC-CCCHHHHHHHHH
Confidence 47888999999999998532 0 0111 1334566778889999986422111000011 1122 4
Q ss_pred HHHHHHHHHHHCCcCEEEE--cCCcC------CCcHHHHHHHHHHHHHhC-----CCccEEEEeCCC
Q 012949 304 KVAYVAKELHDMGCFEISL--GDTIG------VGTPGTVVPMLEAVMAVV-----PVEKLAVHLHDT 357 (452)
Q Consensus 304 ~l~~~a~~l~~~Gad~I~L--~DT~G------~~~P~~v~~li~~l~~~~-----p~~~l~vH~Hnd 357 (452)
.+.+.++.+.++|++.|.+ ....+ .........+++.+++.. -++.|.+|.|+.
T Consensus 89 ~~~~~i~~a~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~ 155 (294)
T 3vni_A 89 FYTDLLKRLYKLDVHLIGGALYSYWPIDYTKTIDKKGDWERSVESVREVAKVAEACGVDFCLEVLNR 155 (294)
T ss_dssp HHHHHHHHHHHHTCCEEEESTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCT
T ss_pred HHHHHHHHHHHhCCCeeeccccCCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEecCc
Confidence 5667888888999999874 22222 112233444444333321 246899999974
No 302
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=86.78 E-value=2.8 Score=41.03 Aligned_cols=83 Identities=22% Similarity=0.199 Sum_probs=68.9
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCcC---CCcHHHHHHHHHHHHHhCC-CccEEEE-eCCCcCcHHHHHHHHHHcC
Q 012949 298 GAIPPSKVAYVAKELHDMGCFEISLGDTIG---VGTPGTVVPMLEAVMAVVP-VEKLAVH-LHDTYGQSLPNILISLQMG 372 (452)
Q Consensus 298 ~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G---~~~P~~v~~li~~l~~~~p-~~~l~vH-~Hnd~GlA~ANaLaAl~aG 372 (452)
+..|.+.+.++++.+.+.|++.|.++-|+| .+++++-.++++.+++... .++|-++ .+++..-++..+..|-++|
T Consensus 28 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~G 107 (301)
T 1xky_A 28 GNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVG 107 (301)
T ss_dssp SSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcC
Confidence 578999999999999999999999999988 6788898999998887754 3455554 4567788888999999999
Q ss_pred CCEEeecc
Q 012949 373 ISTVDCSV 380 (452)
Q Consensus 373 a~~VD~Sv 380 (452)
|+.+=..-
T Consensus 108 adavlv~~ 115 (301)
T 1xky_A 108 VDAVMLVA 115 (301)
T ss_dssp CSEEEEEC
T ss_pred CCEEEEcC
Confidence 99776543
No 303
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=86.67 E-value=1.8 Score=44.03 Aligned_cols=68 Identities=12% Similarity=0.195 Sum_probs=52.3
Q ss_pred HHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEE-EeCCCcCcHHHHHHHHHHcCCCEEeecc
Q 012949 306 AYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAV-HLHDTYGQSLPNILISLQMGISTVDCSV 380 (452)
Q Consensus 306 ~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~v-H~Hnd~GlA~ANaLaAl~aGa~~VD~Sv 380 (452)
.+.++.+.++|++.|.| ++ +...|..+.++|+.+++.+|+.+|.+ ..+ ...-+..+.++|||.|.++.
T Consensus 155 ~~~a~~~~~~G~d~i~i-~~-~~g~~~~~~e~i~~ir~~~~~~pviv~~v~-----~~~~a~~a~~~Gad~I~vg~ 223 (404)
T 1eep_A 155 IERVEELVKAHVDILVI-DS-AHGHSTRIIELIKKIKTKYPNLDLIAGNIV-----TKEAALDLISVGADCLKVGI 223 (404)
T ss_dssp HHHHHHHHHTTCSEEEE-CC-SCCSSHHHHHHHHHHHHHCTTCEEEEEEEC-----SHHHHHHHHTTTCSEEEECS
T ss_pred HHHHHHHHHCCCCEEEE-eC-CCCChHHHHHHHHHHHHHCCCCeEEEcCCC-----cHHHHHHHHhcCCCEEEECC
Confidence 45567788899999988 43 33578889999999999997667776 333 25677888899999999954
No 304
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=86.65 E-value=2.6 Score=41.46 Aligned_cols=82 Identities=17% Similarity=0.082 Sum_probs=69.5
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCcC---CCcHHHHHHHHHHHHHhCC-CccEEEEe-CCCcCcHHHHHHHHHHcC
Q 012949 298 GAIPPSKVAYVAKELHDMGCFEISLGDTIG---VGTPGTVVPMLEAVMAVVP-VEKLAVHL-HDTYGQSLPNILISLQMG 372 (452)
Q Consensus 298 ~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G---~~~P~~v~~li~~l~~~~p-~~~l~vH~-Hnd~GlA~ANaLaAl~aG 372 (452)
+..|.+-+.++++.+.+.|++.|.++-|+| .++.++-.++++.+.+... .++|-+|. +++..-++..+..|-++|
T Consensus 23 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~G 102 (311)
T 3h5d_A 23 GSINFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFG 102 (311)
T ss_dssp SSBCTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSC
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcC
Confidence 578999999999999999999999999999 5888999999999998864 35676765 677888888899999999
Q ss_pred C-CEEeec
Q 012949 373 I-STVDCS 379 (452)
Q Consensus 373 a-~~VD~S 379 (452)
+ +.+=..
T Consensus 103 a~davlv~ 110 (311)
T 3h5d_A 103 GFAAGLAI 110 (311)
T ss_dssp CCSEEEEE
T ss_pred CCcEEEEc
Confidence 7 877554
No 305
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=86.65 E-value=2.8 Score=43.89 Aligned_cols=70 Identities=14% Similarity=0.077 Sum_probs=52.0
Q ss_pred HHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEeecc
Q 012949 305 VAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCSV 380 (452)
Q Consensus 305 l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~Sv 380 (452)
..+.++.+.++|+|.|.| |+.- ..+..+.++|+.+++.+|+.++.+-. .....-+..++++||+.|.+.+
T Consensus 230 ~~~~a~~l~~aG~d~I~i-d~a~-g~~~~~~~~v~~i~~~~p~~~Vi~g~----v~t~e~a~~l~~aGaD~I~vg~ 299 (490)
T 4avf_A 230 TGERVAALVAAGVDVVVV-DTAH-GHSKGVIERVRWVKQTFPDVQVIGGN----IATAEAAKALAEAGADAVKVGI 299 (490)
T ss_dssp HHHHHHHHHHTTCSEEEE-ECSC-CSBHHHHHHHHHHHHHCTTSEEEEEE----ECSHHHHHHHHHTTCSEEEECS
T ss_pred hHHHHHHHhhcccceEEe-cccC-CcchhHHHHHHHHHHHCCCceEEEee----eCcHHHHHHHHHcCCCEEEECC
Confidence 345678888999999988 4432 34678889999999999876665521 1334667889999999998743
No 306
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=86.63 E-value=7.4 Score=36.47 Aligned_cols=111 Identities=9% Similarity=-0.010 Sum_probs=65.8
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCH-------H
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPP-------S 303 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~-------e 303 (452)
+.++.+.+.|.+.|.+...--+ ..+.++.+.+++.|+++.. +...+.. .-...++ +
T Consensus 42 ~~l~~~~~~G~~~vEl~~~~~~---------------~~~~~~~~~l~~~gl~v~~-~~~~~~~-~l~~~d~~~r~~~~~ 104 (287)
T 3kws_A 42 EKLDFMEKLGVVGFEPGGGGLA---------------GRVNEIKQALNGRNIKVSA-ICAGFKG-FILSTDPAIRKECMD 104 (287)
T ss_dssp HHHHHHHHTTCCEEECBSTTCG---------------GGHHHHHHHHTTSSCEECE-EECCCCS-CTTBSSHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEecCCchH---------------HHHHHHHHHHHHcCCeEEE-EecCCCC-cCCCCCHHHHHHHHH
Confidence 4788899999999998865211 2244566778899998752 2211100 0011233 4
Q ss_pred HHHHHHHHHHHCCcCEEEEcCCcCC------CcHHHHHHHHHHHHHh---C--CCccEEEEeCCCc
Q 012949 304 KVAYVAKELHDMGCFEISLGDTIGV------GTPGTVVPMLEAVMAV---V--PVEKLAVHLHDTY 358 (452)
Q Consensus 304 ~l~~~a~~l~~~Gad~I~L~DT~G~------~~P~~v~~li~~l~~~---~--p~~~l~vH~Hnd~ 358 (452)
.+.+.++.+.++|++.|.+.-..+. ..+.....+++.+++. . -++.|.+|.||.+
T Consensus 105 ~~~~~i~~a~~lGa~~v~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~ 170 (287)
T 3kws_A 105 TMKEIIAAAGELGSTGVIIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGTSVIFEPLNRK 170 (287)
T ss_dssp HHHHHHHHHHHTTCSEEEECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCCEEECCCCTT
T ss_pred HHHHHHHHHHHcCCCEEEEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEecCcc
Confidence 6677888889999999887432221 2334444444443322 1 2468999999743
No 307
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=86.54 E-value=1.7 Score=42.92 Aligned_cols=100 Identities=11% Similarity=-0.010 Sum_probs=77.0
Q ss_pred CCCCCHHHHHHHHHHHHHCCcCEEEEcCCcCC---CcHHHHHHHHHHHHHhCC-CccEEEEeCCCcCcHHHHHHHHHHcC
Q 012949 297 EGAIPPSKVAYVAKELHDMGCFEISLGDTIGV---GTPGTVVPMLEAVMAVVP-VEKLAVHLHDTYGQSLPNILISLQMG 372 (452)
Q Consensus 297 ~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~li~~l~~~~p-~~~l~vH~Hnd~GlA~ANaLaAl~aG 372 (452)
.+..|.+-+.++++.+.+.|++.|.++-|+|= ++.++-.++++.+.+... .++|-++.-++.--++..+..|-++|
T Consensus 27 dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg~~t~~ai~la~~A~~~G 106 (316)
T 3e96_A 27 DGSIDWHHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIGYATSTAIELGNAAKAAG 106 (316)
T ss_dssp TCCBCHHHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeCcCHHHHHHHHHHHHhcC
Confidence 35789999999999999999999999999984 678888888988888764 35777776557777788888899999
Q ss_pred CCEEeecccCCCCCCCCCCCCCcccHHHHHHHHH
Q 012949 373 ISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLS 406 (452)
Q Consensus 373 a~~VD~Sv~GlGecP~a~graGNaalE~vv~~L~ 406 (452)
|+.+=.. .||-.. ++-|+++..++
T Consensus 107 adavlv~------~P~y~~----~s~~~l~~~f~ 130 (316)
T 3e96_A 107 ADAVMIH------MPIHPY----VTAGGVYAYFR 130 (316)
T ss_dssp CSEEEEC------CCCCSC----CCHHHHHHHHH
T ss_pred CCEEEEc------CCCCCC----CCHHHHHHHHH
Confidence 9977643 244322 35666666665
No 308
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=86.51 E-value=9.6 Score=37.59 Aligned_cols=145 Identities=14% Similarity=0.053 Sum_probs=81.5
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEee--ecCCCC------CC-CC
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCV--VGCPVE------GA-IP 301 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~--~g~p~~------~r-~d 301 (452)
++++.+++.|+..||+-+-+++. -+. ..++.+.++++.||++|++|...+-+. +..|-. -. .+
T Consensus 31 ~~~~ilk~~G~n~vRlri~v~P~-----~g~---~d~~~~~~~~~~ak~~Gl~v~ld~hysd~wadP~~q~~p~~W~~~~ 102 (334)
T 1fob_A 31 ALETILADAGINSIRQRVWVNPS-----DGS---YDLDYNLELAKRVKAAGMSLYLDLHLSDTWADPSDQTTPSGWSTTD 102 (334)
T ss_dssp CHHHHHHHHTCCEEEEEECSCCT-----TCT---TCHHHHHHHHHHHHHTTCEEEEEECCSSSCCBTTBCBCCTTSCSSC
T ss_pred hHHHHHHHcCCCEEEEEEEECCC-----CCc---cCHHHHHHHHHHHHHCCCEEEEEeccCCCCCCcccccCccccccCC
Confidence 37788889999999986543331 010 125677788999999999988655321 111210 00 11
Q ss_pred HH--------HHHHHHHHHHHCC--cCEEEEcC--CcCCC-------cHHHHHHH----HHHHHHhC--CCccEEEEeCC
Q 012949 302 PS--------KVAYVAKELHDMG--CFEISLGD--TIGVG-------TPGTVVPM----LEAVMAVV--PVEKLAVHLHD 356 (452)
Q Consensus 302 ~e--------~l~~~a~~l~~~G--ad~I~L~D--T~G~~-------~P~~v~~l----i~~l~~~~--p~~~l~vH~Hn 356 (452)
.+ +...+++.+.+.| ++.+.+.. +.|.+ ....+..+ ++++|+.. |..++.+|+.+
T Consensus 103 ~~~~~~~~~~yt~~v~~~l~~~g~~v~~v~vGNE~~~G~lwp~g~~~~~~~l~~~~~~a~~avr~~~~~p~~~v~~h~~~ 182 (334)
T 1fob_A 103 LGTLKWQLYNYTLEVCNTFAENDIDIEIISIGNEIRAGLLWPLGETSSYSNIGALLHSGAWGVKDSNLATTPKIMIHLDD 182 (334)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCSEEEESSSGGGCSSBTTTSTTCHHHHHHHHHHHHHHHHTSCCSSCCEEEEEESC
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEeecCcccccCCCCcchhHHHHHHHHHHHHHHHHHhccCCCCeEEEEcCC
Confidence 11 2334556677766 56665543 23444 23444444 44466667 77789999987
Q ss_pred CcCcHHHH--HHHHHHcC------CCEEeecccCC
Q 012949 357 TYGQSLPN--ILISLQMG------ISTVDCSVAGL 383 (452)
Q Consensus 357 d~GlA~AN--aLaAl~aG------a~~VD~Sv~Gl 383 (452)
-..-+.-+ ...+...| .|+|-.+....
T Consensus 183 ~~~~~~~~~~~~~~~~~g~~~~~~~DvIG~syYp~ 217 (334)
T 1fob_A 183 GWSWDQQNYFYETVLATGELLSTDFDYFGVSYYPF 217 (334)
T ss_dssp TTCHHHHHHHHHHHHHTSSSCGGGCCEEEEECCSS
T ss_pred cCchHHHHHHHHHHHHcCCCCCCCcCEEEEeCCCC
Confidence 32211111 12234556 47777776643
No 309
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius}
Probab=86.46 E-value=6 Score=39.43 Aligned_cols=124 Identities=11% Similarity=-0.021 Sum_probs=73.2
Q ss_pred HhHHHHHHcCCCEEEEEecCCh--HHHhh-hcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeec-CCCCCC-------
Q 012949 231 QGFEAAIAAGAKEVAIFASASE--AFSKS-NINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVG-CPVEGA------- 299 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd--~~~~~-~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g-~p~~~r------- 299 (452)
+.++.+.+.|+..|+|...... .+... ..+-......+.++.+++.|+++|+.|....-.... .++.++
T Consensus 57 ~~l~~lk~~g~N~VrL~v~~~~~~~~~~~~~~~~~~t~~~~~v~~~~~~Ak~~GL~V~l~p~i~~~~g~w~g~i~~~~~~ 136 (343)
T 3civ_A 57 ASMRALAEQPFNWVTLAFAGLMEHPGDPAIAYGPPVTVSDDEIASMAELAHALGLKVCLKPTVNCRDGTWRGEIRFEKEH 136 (343)
T ss_dssp HHHHHHHHSSCSEEEEEEEEEESSTTCCCCBCSTTTBCCHHHHHHHHHHHHHTTCEEEEEEEEEETTCCCGGGCCCSBSC
T ss_pred HHHHHHHHcCCCEEEEEeeecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHCCCEEEEEEEeeccCCcccccccccCcC
Confidence 4778888899999988643211 11100 011100123566778899999999998653332210 111111
Q ss_pred --CCH----------HHHHHHHHHHHHCCcCEEEEcCCc--CCCcHHHHHHHHHHHHHhCCCccEEEEeC
Q 012949 300 --IPP----------SKVAYVAKELHDMGCFEISLGDTI--GVGTPGTVVPMLEAVMAVVPVEKLAVHLH 355 (452)
Q Consensus 300 --~d~----------e~l~~~a~~l~~~Gad~I~L~DT~--G~~~P~~v~~li~~l~~~~p~~~l~vH~H 355 (452)
.++ .++..+++.+...+++.+.+.-=. +...+....+|++.+|+.+|. +|.++..
T Consensus 137 ~~~~~~w~~~f~~y~~~i~~~a~~a~~~~V~~~~IGNE~~~~~~~~~~~~~Li~~vR~~~~g-~VTya~~ 205 (343)
T 3civ_A 137 GPDLESWEAWFGSYSDMMAHYAHVAKRTGCEMFCVGCEMTTAEPHEAMWRETIARVRTEYDG-LVTYNCN 205 (343)
T ss_dssp CTTSSBHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEESCTTTTTCHHHHHHHHHHHHHHCCS-EEEEEEE
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHccCCCceEEEECCCCCCCCchHHHHHHHHHHHHhhCCC-CEEEEec
Confidence 011 234445555556688988886311 122678899999999999987 7887753
No 310
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=86.41 E-value=5.2 Score=37.59 Aligned_cols=112 Identities=13% Similarity=0.083 Sum_probs=66.2
Q ss_pred hHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeee-cC--------------CC
Q 012949 232 GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVV-GC--------------PV 296 (452)
Q Consensus 232 ~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~-g~--------------p~ 296 (452)
.++.+.++|.+.|.++..-.. ..+ -+.+.++.+.+++.|+++.. +...+ |. ++
T Consensus 26 ~l~~~~~~G~~~vEl~~~~~~-------~~~----~~~~~~~~~~l~~~gl~~~~-~~~~~~g~~~~~~~~~~~~~~~~~ 93 (290)
T 3tva_A 26 HLEVAQDLKVPTVQVHAPHPH-------TRT----REHAQAFRAKCDAAGIQVTV-IFGGFDGESYADIPTTARTVGLVP 93 (290)
T ss_dssp CHHHHHHTTCSEEEEECCCGG-------GCS----HHHHHHHHHHHHHTTCEEEE-EECCCTTCCCSSHHHHHHHSSSCS
T ss_pred HHHHHHHcCCCEEEecCCCCC-------cCC----HHHHHHHHHHHHHcCCEEEE-EeeccCCcccccccccccccCCCC
Confidence 788999999999999864221 012 13345667788899998764 22111 11 11
Q ss_pred CC--CCCHHHHHHHHHHHHHCCcCEEEEcCCcCCC---cHHHHHHHHHHHHHh---C--CCccEEEEeCCC
Q 012949 297 EG--AIPPSKVAYVAKELHDMGCFEISLGDTIGVG---TPGTVVPMLEAVMAV---V--PVEKLAVHLHDT 357 (452)
Q Consensus 297 ~~--r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~---~P~~v~~li~~l~~~---~--p~~~l~vH~Hnd 357 (452)
.. ....+.+.+.++.+.++|++.|.+. .|.. .......+++.+++. . -++.|.+|.|.+
T Consensus 94 ~~~r~~~~~~~~~~i~~a~~lG~~~v~~~--~G~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~ 162 (290)
T 3tva_A 94 LETRASRVAEMKEISDFASWVGCPAIGLH--IGFVPESSSPDYSELVRVTQDLLTHAANHGQAVHLETGQE 162 (290)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHTCSEEEEC--CCCCCCTTSHHHHHHHHHHHHHHHHHHTTTCEEEEECCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCEEEEc--CCCCcccchHHHHHHHHHHHHHHHHHHHcCCEEEEecCCC
Confidence 10 1123567778888889999998873 1221 334444444444332 1 246789998864
No 311
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=86.40 E-value=1.7 Score=41.03 Aligned_cols=68 Identities=15% Similarity=0.182 Sum_probs=52.4
Q ss_pred HHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEeecccCC
Q 012949 308 VAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCSVAGL 383 (452)
Q Consensus 308 ~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~Sv~Gl 383 (452)
.++.+.++|+|.|.+ |+.....|..+.++++.+++. +..+..-+|+ ...+..|.++|+++|=+++.|+
T Consensus 93 ~i~~~~~~Gad~V~l-~~~~~~~p~~l~~~i~~~~~~--g~~v~~~v~t-----~eea~~a~~~Gad~Ig~~~~g~ 160 (232)
T 3igs_A 93 DVDALAQAGAAIIAV-DGTARQRPVAVEALLARIHHH--HLLTMADCSS-----VDDGLACQRLGADIIGTTMSGY 160 (232)
T ss_dssp HHHHHHHHTCSEEEE-ECCSSCCSSCHHHHHHHHHHT--TCEEEEECCS-----HHHHHHHHHTTCSEEECTTTTS
T ss_pred HHHHHHHcCCCEEEE-CccccCCHHHHHHHHHHHHHC--CCEEEEeCCC-----HHHHHHHHhCCCCEEEEcCccC
Confidence 356678899998866 887777899999999999874 3445555554 5677889999999997666665
No 312
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=86.37 E-value=2.6 Score=40.67 Aligned_cols=121 Identities=7% Similarity=0.021 Sum_probs=68.0
Q ss_pred HhHHHHHHcCCCEEEEEecC-ChHHHhhhcCCCHHH-HHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCC--C----CCH
Q 012949 231 QGFEAAIAAGAKEVAIFASA-SEAFSKSNINCSIED-SLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEG--A----IPP 302 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~-Sd~~~~~~~~~s~e~-~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~--r----~d~ 302 (452)
+.++.+.++|.+.|-++..- ++. ...+...+. .-+.+.++.+.+++.|+++.. +. ++.+... . ...
T Consensus 40 ~~l~~aa~~G~~~VEl~~~~~~~~---~~~~~~p~~~~~~~~~~l~~~l~~~GL~i~~-~~--~~~~~~~~~~~~~~~~~ 113 (305)
T 3obe_A 40 NGLNRLAKAGYTDLEIFGYREDTG---KFGDYNPKNTTFIASKDYKKMVDDAGLRISS-SH--LTPSLREYTKENMPKFD 113 (305)
T ss_dssp HHHHHHHHHTCCEEEECCBCTTTC---CBCCC----CCCBCHHHHHHHHHHTTCEEEE-EB--CCCSCCCCCGGGHHHHH
T ss_pred HHHHHHHHcCCCEEEecccccccc---cccCcCcccccccCHHHHHHHHHHCCCeEEE-ee--ccccccccchhhHHHHH
Confidence 47788999999999998531 100 001111110 001234556778889998752 21 1111110 0 113
Q ss_pred HHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhC-----CCccEEEEeCCC
Q 012949 303 SKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVV-----PVEKLAVHLHDT 357 (452)
Q Consensus 303 e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~-----p~~~l~vH~Hnd 357 (452)
+.+.+.++.+.++|++.|.+.-.-...++.....+++.+++.. -++.|.+|.|+.
T Consensus 114 ~~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~ 173 (305)
T 3obe_A 114 EFWKKATDIHAELGVSCMVQPSLPRIENEDDAKVVSEIFNRAGEITKKAGILWGYHNHSN 173 (305)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCEEEEECCSG
T ss_pred HHHHHHHHHHHHcCCCEEEeCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCEEEEecCcc
Confidence 4567778888889999999863222235566655555555432 246899999985
No 313
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=86.33 E-value=5 Score=39.46 Aligned_cols=84 Identities=12% Similarity=-0.019 Sum_probs=68.2
Q ss_pred CCCCCHHHHHHHHHHHHHCCcCEEEEcCCcC---CCcHHHHHHHHHHHHHhCC-CccEEEEeCCCcCcHHHHHHHHHHcC
Q 012949 297 EGAIPPSKVAYVAKELHDMGCFEISLGDTIG---VGTPGTVVPMLEAVMAVVP-VEKLAVHLHDTYGQSLPNILISLQMG 372 (452)
Q Consensus 297 ~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G---~~~P~~v~~li~~l~~~~p-~~~l~vH~Hnd~GlA~ANaLaAl~aG 372 (452)
.+..|.+.+.++++.+.+.|++.|.++-|+| .+++++-.++++.+++... .++|-++.=.+..-++..+..|-++|
T Consensus 27 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~st~~ai~la~~A~~~G 106 (314)
T 3d0c_A 27 TREIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIGYSVDTAIELGKSAIDSG 106 (314)
T ss_dssp TCCBCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCcCHHHHHHHHHHHHHcC
Confidence 3578999999999999999999999999988 6788888999998887764 35666665445566778888899999
Q ss_pred CCEEeecc
Q 012949 373 ISTVDCSV 380 (452)
Q Consensus 373 a~~VD~Sv 380 (452)
||.|=..-
T Consensus 107 adavlv~~ 114 (314)
T 3d0c_A 107 ADCVMIHQ 114 (314)
T ss_dssp CSEEEECC
T ss_pred CCEEEECC
Confidence 99776553
No 314
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=86.32 E-value=2.5 Score=41.75 Aligned_cols=115 Identities=18% Similarity=0.159 Sum_probs=79.9
Q ss_pred HHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHHHHHHCCcC-EEEEcC-CcCCCcHHHHHHHHHHHHHhCCC
Q 012949 270 YRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCF-EISLGD-TIGVGTPGTVVPMLEAVMAVVPV 347 (452)
Q Consensus 270 ~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad-~I~L~D-T~G~~~P~~v~~li~~l~~~~p~ 347 (452)
++++.+.|++.|+-|-+ |. -.+.+.+..+.+.+.+.+.. +|.+.- +..++....+..+++.+.+ ..
T Consensus 5 ~~~ll~~A~~~~yAV~A-----fN-----v~n~e~~~Ail~AAee~~sPvIlq~s~g~~~y~g~~~~~~~v~~~a~--~~ 72 (305)
T 1rvg_A 5 GLEILKKAREEGYGVGA-----FN-----VNNMEFLQAVLEAAEEQRSPVILALSEGAMKYGGRALTLMAVELAKE--AR 72 (305)
T ss_dssp HHHHHHHHHHHTCCEEE-----EE-----CCSHHHHHHHHHHHHHTTCCEEEEEEHHHHHHHHHHHHHHHHHHHHH--CS
T ss_pred HHHHHHHHHHCCCEEEE-----Ee-----eCCHHHHHHHHHHHHHhCCCEEEECChhHHhhCCHHHHHHHHHHHHh--CC
Confidence 35777899999987742 21 23578888999999999876 444432 1223334556777777776 44
Q ss_pred ccEEEEeCCCcCcHHHHHHHHHHcCCC--EEeecccCCCCCCCCCCCCCc-ccHHHHHHHHHc
Q 012949 348 EKLAVHLHDTYGQSLPNILISLQMGIS--TVDCSVAGLGGCPYAKGASGN-VATEDVVYMLSG 407 (452)
Q Consensus 348 ~~l~vH~Hnd~GlA~ANaLaAl~aGa~--~VD~Sv~GlGecP~a~graGN-aalE~vv~~L~~ 407 (452)
+|+.+|. |.|......+.|+++|.+ ++|+|-..+-+ | .-|.+++.+.+.
T Consensus 73 VPValHl--DHg~~~e~~~~ai~~GFtSVMiDgS~~p~eE---------Ni~~Tk~vv~~ah~ 124 (305)
T 1rvg_A 73 VPVAVHL--DHGSSYESVLRALRAGFTSVMIDKSHEDFET---------NVRETRRVVEAAHA 124 (305)
T ss_dssp SCEEEEE--EEECSHHHHHHHHHTTCSEEEECCTTSCHHH---------HHHHHHHHHHHHHH
T ss_pred CcEEEEC--CCCCCHHHHHHHHHcCCCeeeeCCCCCCHHH---------HHHHHHHHHHHHHH
Confidence 6777765 555668999999999998 78999776655 4 446667777763
No 315
>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} SCOP: c.1.15.3 PDB: 1s5m_A* 1s5n_A* 2gyi_A* 1xyb_A* 1xyc_A* 1xya_A* 1xyl_A 1xym_A* 1dxi_A 3gnx_A* 1gw9_A* 1xib_A 1xic_A* 1xid_A* 1xie_A* 1xif_A* 1xig_A* 1xih_A* 1xii_A* 1xij_A ...
Probab=86.26 E-value=2.4 Score=42.52 Aligned_cols=222 Identities=15% Similarity=0.144 Sum_probs=0.0
Q ss_pred HHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhc---cCCceeEEecch---------hhhhhhhhhhhhcc
Q 012949 151 VELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDL---EGARLPVLTPNL---------KVILQRSILFQQCH 218 (452)
Q Consensus 151 ~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~---~~~~l~~l~~~~---------~~~i~r~~~~~~~~ 218 (452)
.+.++.+.++|++.||+.......+.+...+..+..+.+++. .++++.++.++. . +....
T Consensus 36 ~e~l~~aa~~G~~~VEl~~~~~~p~~~~~~~~~~~~~~l~~~l~~~GL~i~~~~~~~~~~p~~~~g~--------l~~~d 107 (386)
T 1muw_A 36 VETVQRLAELGAHGVTFHDDDLIPFGSSDTERESHIKRFRQALDATGMTVPMATTNLFTHPVFKDGG--------FTAND 107 (386)
T ss_dssp HHHHHHHHHHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHHHTCBCCEEECCCSSSGGGTTCS--------TTCSS
T ss_pred HHHHHHHHHcCCCEEEeeCCCCCcccCcccccHHHHHHHHHHHHHhCCeEEEEecccccccccccCC--------CCCCC
Q ss_pred chhhhhhhhccHHhHHHHHHcCCCEEEEEecCC--hHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCC
Q 012949 219 ASVISSNLWVYLQGFEAAIAAGAKEVAIFASAS--EAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPV 296 (452)
Q Consensus 219 ~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~S--d~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~ 296 (452)
.++-+.......+.++.|.+.|++.|.+..... +...........+...+.+.++.++|++.|..|+..+...-+-|.
T Consensus 108 ~~~r~~~i~~~~~~i~~A~~LGa~~vvv~~g~~~~~~~~~~~~~~~~~~~~e~L~~l~~~A~~~G~~v~l~lE~~~~e~~ 187 (386)
T 1muw_A 108 RDVRRYALRKTIRNIDLAVELGAKTYVAWGGREGAESGAAKDVRVALDRMKEAFDLLGEYVTSQGYDIRFAIEPKPNEPR 187 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCSEEEECCTTCEESSTTSCCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEECCCSSSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEECCCCCcccccccCCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeeCCCCCc
Q ss_pred CCCCCHHHHHHHHHHHHHCCcC--EEEEcCCcCCCcHH-HHHHHHHHHH--HhCCCccEEEEeCCCcCcHHHHHHHHHHc
Q 012949 297 EGAIPPSKVAYVAKELHDMGCF--EISLGDTIGVGTPG-TVVPMLEAVM--AVVPVEKLAVHLHDTYGQSLPNILISLQM 371 (452)
Q Consensus 297 ~~r~d~e~l~~~a~~l~~~Gad--~I~L~DT~G~~~P~-~v~~li~~l~--~~~p~~~l~vH~Hnd~GlA~ANaLaAl~a 371 (452)
.+..-. ...++.+.+.+.+-. .=..-||.=..... ...+.++.+. .++.. +|++|+.|.
T Consensus 188 ~~~~~~-t~~~~~~li~~v~~pn~vgl~lD~~H~~~~g~d~~~~l~~~~~~~rI~~----vHl~D~~g~----------- 251 (386)
T 1muw_A 188 GDILLP-TVGHALAFIERLERPELYGVNPEVGHEQMAGLNFPHGIAQALWAGKLFH----IDLNGQSGI----------- 251 (386)
T ss_dssp SEESSC-SHHHHHHHHTTSSSGGGEEECCBHHHHHTTTCCHHHHHHHHHHTTCBCC----CEECBCCSS-----------
T ss_pred ccccCC-CHHHHHHHHHHhCCccceEEEeeccchhhcCCCHHHHHHHhcccCcEEE----EEeCCCCCC-----------
Q ss_pred CCCEEeecccC---CCCCCCCCCCCCcccH-HHHHHHHHcCCCC
Q 012949 372 GISTVDCSVAG---LGGCPYAKGASGNVAT-EDVVYMLSGLGVE 411 (452)
Q Consensus 372 Ga~~VD~Sv~G---lGecP~a~graGNaal-E~vv~~L~~~Gi~ 411 (452)
..-. +|. |+... ..++..|+..|++
T Consensus 252 -------~~d~~l~~G~--------G~i~~~~~~~~~L~~~Gy~ 280 (386)
T 1muw_A 252 -------KYDQDLRFGA--------GDLRAAFWLVDLLESAGYE 280 (386)
T ss_dssp -------SSCCCBCTTS--------SSHHHHHHHHHHHHHHTCC
T ss_pred -------CCCCCccCCC--------cchHHHHHHHHHHHhcCCC
No 316
>2yx0_A Radical SAM enzyme; predicted tRNA modification enzyme, metal binding protein, structural genomics, NPPSFA; 2.21A {Pyrococcus horikoshii}
Probab=86.25 E-value=26 Score=34.09 Aligned_cols=112 Identities=13% Similarity=0.061 Sum_probs=68.4
Q ss_pred hHHHHHHcC--CCEEEEEecC-Ch-HHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHH
Q 012949 232 GFEAAIAAG--AKEVAIFASA-SE-AFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAY 307 (452)
Q Consensus 232 ~ie~a~~~G--i~~V~i~~s~-Sd-~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~ 307 (452)
.++...++| .+.+.+.+.. ++ .|.+.. +......++++.+.++.+++.|+.+.+.+. + .+... .+.+.+
T Consensus 184 ~l~~L~~~g~~~~~l~isld~~~~e~~~~i~-~~~~~~~~~~~~~~i~~l~~~g~~v~i~~~--l-~~g~n---~~~~~~ 256 (342)
T 2yx0_A 184 RLEEMIKEDKLPTQLYVSITAPDIETYNSVN-IPMIPDGWERILRFLELMRDLPTRTVVRLT--L-VKGEN---MHSPEK 256 (342)
T ss_dssp HHHHHHHTTCCCSEEEEEECCSSHHHHHHHH-CBSSSCHHHHHHHHHHHHTTCSSEEEEEEE--E-CTTTT---CCCHHH
T ss_pred HHHHHHhcCCCCCEEEEEccCCCHHHHHHHh-CCCcccHHHHHHHHHHHHHhCCCCEEEEEE--E-ECCcc---HHHHHH
Confidence 567777877 8999988755 33 332221 111123456666777888888987764443 3 12111 122666
Q ss_pred HHHHHHHCCcCEEEEc--------C----CcCCCcHHHHHHHHHHHHHhCCCccE
Q 012949 308 VAKELHDMGCFEISLG--------D----TIGVGTPGTVVPMLEAVMAVVPVEKL 350 (452)
Q Consensus 308 ~a~~l~~~Gad~I~L~--------D----T~G~~~P~~v~~li~~l~~~~p~~~l 350 (452)
+++.+.+.|++.|.+. . .....+++++.++.+.+++.+|...|
T Consensus 257 l~~~l~~~~~~~i~l~~~~~~~~~~~~l~~~~~~~~e~~~~~~~~l~~~l~~~~I 311 (342)
T 2yx0_A 257 YAKLILKARPMFVEAKAYMFVGYSRNRLTINNMPSHQDIREFAEALVKHLPGYHI 311 (342)
T ss_dssp HHHHHHHHCCSEEEEEECC------CCCCGGGSCCHHHHHHHHHHHHTTCTTEEE
T ss_pred HHHHHHHcCCCEEEEEeeeecCCCcccccccCCCCHHHHHHHHHHHHHhccCCce
Confidence 6666777788877641 1 12245678899999999988875444
No 317
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=86.08 E-value=3.6 Score=42.26 Aligned_cols=140 Identities=13% Similarity=-0.037 Sum_probs=82.4
Q ss_pred HhHHHHHHcCCCEEEEEecC--------ChHHH--hhhcCCCH-HHHHHHHHHHHHHHHhC-------CCcEEEEEEeee
Q 012949 231 QGFEAAIAAGAKEVAIFASA--------SEAFS--KSNINCSI-EDSLVRYRAVAHAAKVL-------SIPVRGYVSCVV 292 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~--------Sd~~~--~~~~~~s~-e~~l~~~~~~v~~Ak~~-------G~~V~~~l~~~~ 292 (452)
+..++|+++|.|.|.|-..- |+..+ ...+|-|. ++=.+.+.++++.+|+. .+.|.+-|+..-
T Consensus 174 ~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~~~~f~v~vRis~~~ 253 (419)
T 3l5a_A 174 DATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRATPEE 253 (419)
T ss_dssp HHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECSCE
T ss_pred HHHHHHHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhhcCCCeeEEEeccccc
Confidence 34566778999999997542 33322 22356676 77667777777776653 344544444210
Q ss_pred cCCCCC--CCCHHHHHHHHHHHHH-CCcCEEEEcCCcC----CC---cH-HHHHHHHHHHHHhCC-CccEEEEeCCCcCc
Q 012949 293 GCPVEG--AIPPSKVAYVAKELHD-MGCFEISLGDTIG----VG---TP-GTVVPMLEAVMAVVP-VEKLAVHLHDTYGQ 360 (452)
Q Consensus 293 g~p~~~--r~d~e~l~~~a~~l~~-~Gad~I~L~DT~G----~~---~P-~~v~~li~~l~~~~p-~~~l~vH~Hnd~Gl 360 (452)
. ..+ -.+.+...++++.+.+ +|+|.|.+..... .. .+ ..-.++++.+++.++ .++|..=.-- .
T Consensus 254 ~--~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~~~iPVI~~GgI---~ 328 (419)
T 3l5a_A 254 T--RGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLAGRIPLIASGGI---N 328 (419)
T ss_dssp E--ETTEEEECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHHTTSSCEEECSSC---C
T ss_pred c--cCCCCCCCHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHHcCCCCeEEEECCC---C
Confidence 0 011 2467889999999999 9999999877432 11 11 112346677777764 2455432210 1
Q ss_pred HHHHHHHHHHcCCCEE
Q 012949 361 SLPNILISLQMGISTV 376 (452)
Q Consensus 361 A~ANaLaAl~aGa~~V 376 (452)
-...+..+++. ||.|
T Consensus 329 t~e~Ae~~L~~-aDlV 343 (419)
T 3l5a_A 329 SPESALDALQH-ADMV 343 (419)
T ss_dssp SHHHHHHHGGG-CSEE
T ss_pred CHHHHHHHHHh-CCcH
Confidence 24566777777 6654
No 318
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=86.05 E-value=6.1 Score=39.18 Aligned_cols=135 Identities=13% Similarity=0.067 Sum_probs=86.2
Q ss_pred HHHHHHcCCCEEEEEe-cCCh-HHHhhh-cCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHH
Q 012949 233 FEAAIAAGAKEVAIFA-SASE-AFSKSN-INCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVA 309 (452)
Q Consensus 233 ie~a~~~Gi~~V~i~~-s~Sd-~~~~~~-~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a 309 (452)
...+.++|++.|.+.. +++- .+-..- .-.|.++.+..++.+.+.++ .++|.+.+ |... -+++.+.+.+
T Consensus 52 A~i~e~aGfdai~vs~~~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~--~~PviaD~------d~Gy-g~~~~v~~tv 122 (318)
T 1zlp_A 52 AAVVEKTGFHAAFVSGYSVSAAMLGLPDFGLLTTTEVVEATRRITAAAP--NLCVVVDG------DTGG-GGPLNVQRFI 122 (318)
T ss_dssp HHHHHHTTCSEEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHHHSS--SSEEEEEC------TTCS-SSHHHHHHHH
T ss_pred HHHHHHcCCCEEEECcHHHhhHhcCCCCCCCCCHHHHHHHHHHHHhhcc--CCCEEEeC------CCCC-CCHHHHHHHH
Confidence 3456678999888765 2331 111111 24578888888777666543 45665322 3332 2788999999
Q ss_pred HHHHHCCcCEEEEcCCcC-----------CCcHHHHHHHHHHHHHhCCCccEEEEeCCC-cC-----cHHHHHHHHHHcC
Q 012949 310 KELHDMGCFEISLGDTIG-----------VGTPGTVVPMLEAVMAVVPVEKLAVHLHDT-YG-----QSLPNILISLQMG 372 (452)
Q Consensus 310 ~~l~~~Gad~I~L~DT~G-----------~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd-~G-----lA~ANaLaAl~aG 372 (452)
+++.++|+..|.|-|..+ +...++..+.|+++++......+-+-.-.| +. -++.-+.+-.+||
T Consensus 123 ~~l~~aGaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ARtda~a~~gl~~ai~Ra~Ay~eAG 202 (318)
T 1zlp_A 123 RELISAGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVARTDARAPHGLEEGIRRANLYKEAG 202 (318)
T ss_dssp HHHHHTTCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEEEECTHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHcCCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhcccCCcEEEEeeHHhhhcCHHHHHHHHHHHHHcC
Confidence 999999999999999973 333445667788887764222233433333 22 4677788888999
Q ss_pred CCEE
Q 012949 373 ISTV 376 (452)
Q Consensus 373 a~~V 376 (452)
|+.|
T Consensus 203 Ad~i 206 (318)
T 1zlp_A 203 ADAT 206 (318)
T ss_dssp CSEE
T ss_pred CCEE
Confidence 9965
No 319
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=86.04 E-value=17 Score=35.36 Aligned_cols=101 Identities=15% Similarity=0.203 Sum_probs=68.3
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 310 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~ 310 (452)
+-++..++.|++.|-+.-+..|.+ -.|.+|-.+-++.+++.++. .++|.+.+ +..+.+...++++
T Consensus 37 ~lv~~li~~Gv~gl~v~GtTGE~~-----~Ls~eEr~~v~~~~~~~~~g-rvpViaGv---------g~~~t~~ai~la~ 101 (301)
T 1xky_A 37 KLVNYLIDNGTTAIVVGGTTGESP-----TLTSEEKVALYRHVVSVVDK-RVPVIAGT---------GSNNTHASIDLTK 101 (301)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTGG-----GSCHHHHHHHHHHHHHHHTT-SSCEEEEC---------CCSCHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECccccChh-----hCCHHHHHHHHHHHHHHhCC-CceEEeCC---------CCCCHHHHHHHHH
Confidence 366777889999998887777753 35777777766666666543 34554211 2345677888999
Q ss_pred HHHHCCcCEEEE-cCCcCCCcHHHHHHHHHHHHHhCC
Q 012949 311 ELHDMGCFEISL-GDTIGVGTPGTVVPMLEAVMAVVP 346 (452)
Q Consensus 311 ~l~~~Gad~I~L-~DT~G~~~P~~v~~li~~l~~~~p 346 (452)
.+.++|+|.+-+ +=..--.+++.+.+.++.+.+..+
T Consensus 102 ~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~ 138 (301)
T 1xky_A 102 KATEVGVDAVMLVAPYYNKPSQEGMYQHFKAIAESTP 138 (301)
T ss_dssp HHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHTCS
T ss_pred HHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999999986554 333334577788888888877654
No 320
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=86.03 E-value=14 Score=35.73 Aligned_cols=101 Identities=19% Similarity=0.193 Sum_probs=67.6
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 310 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~ 310 (452)
+.++..++.|++.+-+.-+..|. ...|.+|-.+-++.+++.++. .++|.+.+ +..+.+...++++
T Consensus 26 ~lv~~li~~Gv~gl~~~GttGE~-----~~Ls~~Er~~v~~~~~~~~~g-r~pviaGv---------g~~~t~~ai~la~ 90 (291)
T 3tak_A 26 KLVEWHIEQGTNSIVAVGTTGEA-----STLSMEEHTQVIKEIIRVANK-RIPIIAGT---------GANSTREAIELTK 90 (291)
T ss_dssp HHHHHHHHHTCCEEEESSTTTTG-----GGSCHHHHHHHHHHHHHHHTT-SSCEEEEC---------CCSSHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEECcccccc-----ccCCHHHHHHHHHHHHHHhCC-CCeEEEeC---------CCCCHHHHHHHHH
Confidence 36677788999999887777775 345777777766666666653 24554211 2345678888888
Q ss_pred HHHHCCcCEEEEc-CCcCCCcHHHHHHHHHHHHHhCC
Q 012949 311 ELHDMGCFEISLG-DTIGVGTPGTVVPMLEAVMAVVP 346 (452)
Q Consensus 311 ~l~~~Gad~I~L~-DT~G~~~P~~v~~li~~l~~~~p 346 (452)
.+.++|+|.+.+. =..--.+++.+.+.++.+.+..+
T Consensus 91 ~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~ 127 (291)
T 3tak_A 91 AAKDLGADAALLVTPYYNKPTQEGLYQHYKAIAEAVE 127 (291)
T ss_dssp HHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCC
T ss_pred HHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 8888999865543 33334567778888888777653
No 321
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=85.97 E-value=3.9 Score=39.77 Aligned_cols=82 Identities=16% Similarity=0.176 Sum_probs=69.2
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCcCC---CcHHHHHHHHHHHHHhCCC-ccEEEE-eCCCcCcHHHHHHHHHHcC
Q 012949 298 GAIPPSKVAYVAKELHDMGCFEISLGDTIGV---GTPGTVVPMLEAVMAVVPV-EKLAVH-LHDTYGQSLPNILISLQMG 372 (452)
Q Consensus 298 ~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~li~~l~~~~p~-~~l~vH-~Hnd~GlA~ANaLaAl~aG 372 (452)
+..|.+.+.++++.+.+.|++.|.++-|+|= +++++-.++++.+.+.... ++|-+| .+++..-++..+..|-++|
T Consensus 19 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~G 98 (294)
T 3b4u_A 19 GTVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAG 98 (294)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcC
Confidence 5789999999999999999999999999885 8889999999999987643 456554 5667888888999999999
Q ss_pred CCEEeec
Q 012949 373 ISTVDCS 379 (452)
Q Consensus 373 a~~VD~S 379 (452)
|+.+=..
T Consensus 99 adavlv~ 105 (294)
T 3b4u_A 99 ARNILLA 105 (294)
T ss_dssp CSEEEEC
T ss_pred CCEEEEc
Confidence 9977554
No 322
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=85.96 E-value=26 Score=33.88 Aligned_cols=123 Identities=17% Similarity=0.136 Sum_probs=76.2
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEEcCCc-CCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHH-HHHcCCCEEe
Q 012949 300 IPPSKVAYVAKELHDMGCFEISLGDTI-GVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILI-SLQMGISTVD 377 (452)
Q Consensus 300 ~d~e~l~~~a~~l~~~Gad~I~L~DT~-G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLa-Al~aGa~~VD 377 (452)
.+++.+.+.++.+.+.|+..|.|.+-- -.+.++.+.++++.+++. + +.+++++ |+-....+. -.++|++.+.
T Consensus 84 ls~eei~~~i~~~~~~g~~~i~~~gGe~p~~~~~~~~~li~~i~~~--~--~~i~~s~--g~l~~e~l~~L~~ag~~~v~ 157 (348)
T 3iix_A 84 MTPEEIVERARLAVQFGAKTIVLQSGEDPYXMPDVISDIVKEIKKM--G--VAVTLSL--GEWPREYYEKWKEAGADRYL 157 (348)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEESCCGGGTTHHHHHHHHHHHTT--S--CEEEEEC--CCCCHHHHHHHHHHTCCEEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEEeCCCCCccHHHHHHHHHHHHhc--C--ceEEEec--CCCCHHHHHHHHHhCCCEEe
Confidence 478999999999999999999995432 223347889999999876 3 4455433 333344444 4468999998
Q ss_pred ecccCCCCCCCCCCCCCcccHHHHHHHHH---cCCCCC---------CCChhhHHHHHHHHHHH
Q 012949 378 CSVAGLGGCPYAKGASGNVATEDVVYMLS---GLGVET---------NVDLRKLMLAGDFINKH 429 (452)
Q Consensus 378 ~Sv~GlGecP~a~graGNaalE~vv~~L~---~~Gi~t---------~iDl~~L~~la~~v~~~ 429 (452)
.++-+.-.=-+..- .+..+.++++..++ ..|+.. +-+.+.+.++.+++.+.
T Consensus 158 i~let~~~~~~~~i-~~~~~~~~~~~~i~~~~~~Gi~v~~~~i~G~p~et~e~~~~~~~~l~~l 220 (348)
T 3iix_A 158 LRHETANPVLHRKL-RPDTSFENRLNCLLTLKELGYETGAGSMVGLPGQTIDDLVDDLLFLKEH 220 (348)
T ss_dssp CCCBCSCHHHHHHH-STTSCHHHHHHHHHHHHHTTCEEEECBEESCTTCCHHHHHHHHHHHHHH
T ss_pred eeeeeCCHHHHHHh-CCCcCHHHHHHHHHHHHHhCCeeccceEEeCCCCCHHHHHHHHHHHHhc
Confidence 87776521000000 11126676666655 345432 23566777777777764
No 323
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=85.92 E-value=7.1 Score=38.81 Aligned_cols=121 Identities=24% Similarity=0.252 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEEEeeec---C-----------------CCC-----C-----CCCH-------HHH
Q 012949 263 IEDSLVRYRAVAHAAKVLSIPVRGYVSCVVG---C-----------------PVE-----G-----AIPP-------SKV 305 (452)
Q Consensus 263 ~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g---~-----------------p~~-----~-----r~d~-------e~l 305 (452)
.++.++..+++++.+++.|-++.+-|.+. | . |-+ + ..+. +.+
T Consensus 76 ~d~~i~~~~~~~~~vh~~G~~i~~Ql~H~-Gr~~~~~~~~~~~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~ii~~f 154 (349)
T 3hgj_A 76 SEDHLPGLKELARRIREAGAVPGIQLAHA-GRKAGTARPWEGGKPLGWRVVGPSPIPFDEGYPVPEPLDEAGMERILQAF 154 (349)
T ss_dssp SGGGHHHHHHHHHHHHHTTCEEEEEEECC-GGGCCBCCGGGTCCBCCCCCEESSSCCSSTTCCCCEECCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHhCCCeEEEEeccC-CccccccccccccccCCCcccCCCcccccCCCCCCccCCHHHHHHHHHHH
Confidence 34567888899999999999887667653 1 0 000 0 0122 244
Q ss_pred HHHHHHHHHCCcCEEEEc-------------------CCcCCCcH---HHHHHHHHHHHHhCC-CccEEEEeCCC----c
Q 012949 306 AYVAKELHDMGCFEISLG-------------------DTIGVGTP---GTVVPMLEAVMAVVP-VEKLAVHLHDT----Y 358 (452)
Q Consensus 306 ~~~a~~l~~~Gad~I~L~-------------------DT~G~~~P---~~v~~li~~l~~~~p-~~~l~vH~Hnd----~ 358 (452)
.+.|+.+.++|.|.|.|- |-.|...- .-+.++|+++++.++ +.+|.+-.+-+ -
T Consensus 155 ~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~~~~ 234 (349)
T 3hgj_A 155 VEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWGEG 234 (349)
T ss_dssp HHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCSTT
T ss_pred HHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEeccccccCC
Confidence 556778889999987774 33343222 336889999999986 44677765532 1
Q ss_pred CcHHHH----HHHHHHcCCCEEeecccCCC
Q 012949 359 GQSLPN----ILISLQMGISTVDCSVAGLG 384 (452)
Q Consensus 359 GlA~AN----aLaAl~aGa~~VD~Sv~GlG 384 (452)
|.-... +...-++|+++|+.+..+.-
T Consensus 235 g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~ 264 (349)
T 3hgj_A 235 GWSLEDTLAFARRLKELGVDLLDCSSGGVV 264 (349)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEECCCSC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCcC
Confidence 333333 33334689999999976553
No 324
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=85.92 E-value=17 Score=33.79 Aligned_cols=115 Identities=13% Similarity=0.025 Sum_probs=66.9
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCH-------H
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPP-------S 303 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~-------e 303 (452)
+.++.+.+.|++.|.+....... .+ + ..+.++.+.+++.|+++.....+.......+ .++ +
T Consensus 21 ~~l~~~~~~G~~~vEl~~~~~~~-------~~-~---~~~~~~~~~l~~~gl~~~~~~~~~~~~~l~~-~d~~~r~~~~~ 88 (290)
T 2qul_A 21 ATAKRIAGLGFDLMEISLGEFHN-------LS-D---AKKRELKAVADDLGLTVMCCIGLKSEYDFAS-PDKSVRDAGTE 88 (290)
T ss_dssp HHHHHHHHTTCSEEEEESTTGGG-------SC-H---HHHHHHHHHHHHHTCEEEEEEEECGGGCTTC-SCHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEecCCccc-------cc-h---hhHHHHHHHHHHcCCceEEecCCCCCCCCCC-CCHHHHHHHHH
Confidence 36788899999999998642111 11 1 3345666788889999875221110001111 122 5
Q ss_pred HHHHHHHHHHHCCcCEEEEcC--CcCC-------CcHHHHHHHHHHHHHhC-----CCccEEEEeCCC
Q 012949 304 KVAYVAKELHDMGCFEISLGD--TIGV-------GTPGTVVPMLEAVMAVV-----PVEKLAVHLHDT 357 (452)
Q Consensus 304 ~l~~~a~~l~~~Gad~I~L~D--T~G~-------~~P~~v~~li~~l~~~~-----p~~~l~vH~Hnd 357 (452)
.+.+.++.+.++|++.|.+.= ..|. ........+++.+++.. -++.|.+|.|+.
T Consensus 89 ~~~~~i~~a~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~ 156 (290)
T 2qul_A 89 YVKRLLDDCHLLGAPVFAGLTFCAWPQSPPLDMKDKRPYVDRAIESVRRVIKVAEDYGIIYALEVVNR 156 (290)
T ss_dssp HHHHHHHHHHHHTCSEEEEEEEEESSCCCCTTCCCCHHHHHHHHHHHHTTHHHHHHHTCEEEEECCCT
T ss_pred HHHHHHHHHHHcCCCEEEeeccccCCcccCCCcccHHHHHHHHHHHHHHHHHHHHHcCCEEEEEeCcc
Confidence 677788888899999887521 0132 33444555555554321 146899999984
No 325
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=85.91 E-value=2.9 Score=40.55 Aligned_cols=81 Identities=12% Similarity=0.010 Sum_probs=67.6
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCcC---CCcHHHHHHHHHHHHHhCCC-ccEEEE-eCCCcCcHHHHHHHHHHcC
Q 012949 298 GAIPPSKVAYVAKELHDMGCFEISLGDTIG---VGTPGTVVPMLEAVMAVVPV-EKLAVH-LHDTYGQSLPNILISLQMG 372 (452)
Q Consensus 298 ~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G---~~~P~~v~~li~~l~~~~p~-~~l~vH-~Hnd~GlA~ANaLaAl~aG 372 (452)
+ .|.+.+.++++.+.+.|++.|.++-|+| .+++++-.++++.+++...+ ++|-+| .+|+..-++..+..|-++|
T Consensus 18 g-iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a~~~G 96 (291)
T 3a5f_A 18 G-VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWAESIG 96 (291)
T ss_dssp S-BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTT
T ss_pred C-cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHhcC
Confidence 5 8999999999999999999999999988 67888888899988876543 455554 4567788888999999999
Q ss_pred CCEEeec
Q 012949 373 ISTVDCS 379 (452)
Q Consensus 373 a~~VD~S 379 (452)
|+.+=..
T Consensus 97 adavlv~ 103 (291)
T 3a5f_A 97 VDGLLVI 103 (291)
T ss_dssp CSEEEEE
T ss_pred CCEEEEc
Confidence 9977554
No 326
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=85.88 E-value=0.83 Score=43.10 Aligned_cols=98 Identities=10% Similarity=0.076 Sum_probs=61.5
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHH--HHHHHHHHHHhC-CCccEEEEeCCCcCcHHHHHHHHHHcCCCEE
Q 012949 300 IPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGT--VVPMLEAVMAVV-PVEKLAVHLHDTYGQSLPNILISLQMGISTV 376 (452)
Q Consensus 300 ~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~--v~~li~~l~~~~-p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~V 376 (452)
.|...+.+.++.+.++|+|++.+-=+-|...|.- =.++++.+|+.+ |..++.+|.|-+.--.. .-.+.++||++|
T Consensus 14 ~D~~~l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G~~~v~~ir~~~~~~~~~dvhLmv~~p~~~--i~~~~~aGad~i 91 (228)
T 3ovp_A 14 SDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQW--VKPMAVAGANQY 91 (228)
T ss_dssp SCGGGHHHHHHHHHHTTCSCEEEEEEBSSSSSCBCBCHHHHHHHHHHHCSSSCEEEEEECSCGGGG--HHHHHHHTCSEE
T ss_pred CCchhHHHHHHHHHHcCCCEEEEEecCCCcCcccccCHHHHHHHHHhhCCCCcEEEEEEeCCHHHH--HHHHHHcCCCEE
Confidence 4677888899999999999555422225543322 134677888876 77789999886432222 345678999988
Q ss_pred eecccCCCCCCCCCCCCCcccHHHHHHHHHcCCCC
Q 012949 377 DCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVE 411 (452)
Q Consensus 377 D~Sv~GlGecP~a~graGNaalE~vv~~L~~~Gi~ 411 (452)
..-. | ++. .+..++..++.+|.+
T Consensus 92 tvH~----E-------a~~-~~~~~i~~i~~~G~k 114 (228)
T 3ovp_A 92 TFHL----E-------ATE-NPGALIKDIRENGMK 114 (228)
T ss_dssp EEEG----G-------GCS-CHHHHHHHHHHTTCE
T ss_pred EEcc----C-------Cch-hHHHHHHHHHHcCCC
Confidence 7632 3 112 355666666655543
No 327
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=85.71 E-value=13 Score=36.36 Aligned_cols=101 Identities=13% Similarity=0.071 Sum_probs=69.4
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 310 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~ 310 (452)
+.++..++.|++.|-+.-+..|.+ ..|.+|-.+-++.+++.++. .++|.+.+ +..+.+...++++
T Consensus 40 ~lv~~li~~Gv~gi~v~GttGE~~-----~Lt~~Er~~v~~~~~~~~~g-rvpviaGv---------g~~~t~~ai~la~ 104 (304)
T 3l21_A 40 RLANHLVDQGCDGLVVSGTTGESP-----TTTDGEKIELLRAVLEAVGD-RARVIAGA---------GTYDTAHSIRLAK 104 (304)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGG-----GSCHHHHHHHHHHHHHHHTT-TSEEEEEC---------CCSCHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEeCccccchh-----hCCHHHHHHHHHHHHHHhCC-CCeEEEeC---------CCCCHHHHHHHHH
Confidence 366777889999998888877753 45777777766666666543 34554211 2345688888999
Q ss_pred HHHHCCcCEEEEc-CCcCCCcHHHHHHHHHHHHHhCC
Q 012949 311 ELHDMGCFEISLG-DTIGVGTPGTVVPMLEAVMAVVP 346 (452)
Q Consensus 311 ~l~~~Gad~I~L~-DT~G~~~P~~v~~li~~l~~~~p 346 (452)
.+.++|+|.+-+. =..--.+++.+.+.++.+.+..+
T Consensus 105 ~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~ 141 (304)
T 3l21_A 105 ACAAEGAHGLLVVTPYYSKPPQRGLQAHFTAVADATE 141 (304)
T ss_dssp HHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTSCS
T ss_pred HHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 9999999966554 33344567788888888877653
No 328
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=85.68 E-value=13 Score=37.51 Aligned_cols=104 Identities=13% Similarity=0.067 Sum_probs=65.8
Q ss_pred HHHHHHHHHHHHHHh-----CCCcEEEEEEeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCc-------------
Q 012949 265 DSLVRYRAVAHAAKV-----LSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTI------------- 326 (452)
Q Consensus 265 ~~l~~~~~~v~~Ak~-----~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~------------- 326 (452)
+.+..+.+.++.+++ ..++|.+-+. |+ .+.+.+.++++.+.++|+|.|.+-.|.
T Consensus 199 ~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~-----p~---~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~ 270 (367)
T 3zwt_A 199 AELRRLLTKVLQERDGLRRVHRPAVLVKIA-----PD---LTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRS 270 (367)
T ss_dssp HHHHHHHHHHHHHHHTSCGGGCCEEEEEEC-----SC---CCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTT
T ss_pred HHHHHHHHHHHHHHhhccccCCceEEEEeC-----CC---CCHHHHHHHHHHHHHcCCCEEEEeCCCccccccccccccc
Confidence 455555555555432 3566654443 22 356789999999999999999988775
Q ss_pred --CCCc----HHHHHHHHHHHHHhCC-CccEEEEeCCCcCcHHHHHHHHHHcCCCEEeec
Q 012949 327 --GVGT----PGTVVPMLEAVMAVVP-VEKLAVHLHDTYGQSLPNILISLQMGISTVDCS 379 (452)
Q Consensus 327 --G~~~----P~~v~~li~~l~~~~p-~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~S 379 (452)
|.++ +....++|+.+++.++ .++|-.=.-=. -..-++.++++||+.|-..
T Consensus 271 ~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~---s~~da~~~l~~GAd~V~vg 327 (367)
T 3zwt_A 271 ETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVS---SGQDALEKIRAGASLVQLY 327 (367)
T ss_dssp SSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCC---SHHHHHHHHHHTCSEEEES
T ss_pred ccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCC---CHHHHHHHHHcCCCEEEEC
Confidence 2122 2334578899998885 34443322111 1366788888999987654
No 329
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=85.68 E-value=17 Score=35.11 Aligned_cols=101 Identities=12% Similarity=0.073 Sum_probs=66.9
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 310 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~ 310 (452)
+.++..++.|++.+-+.-+..|.+ -.|.+|-.+-++.+++.++. .++|.+.+ +..+.+...++++
T Consensus 25 ~lv~~li~~Gv~gl~~~GttGE~~-----~Ls~~Er~~v~~~~~~~~~g-rvpviaGv---------g~~~t~~ai~la~ 89 (294)
T 2ehh_A 25 NLIEFHVDNGTDAILVCGTTGESP-----TLTFEEHEKVIEFAVKRAAG-RIKVIAGT---------GGNATHEAVHLTA 89 (294)
T ss_dssp HHHHHHHTTTCCEEEESSTTTTGG-----GSCHHHHHHHHHHHHHHHTT-SSEEEEEC---------CCSCHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEECccccChh-----hCCHHHHHHHHHHHHHHhCC-CCcEEEec---------CCCCHHHHHHHHH
Confidence 366777889999988887777753 35677777666666665543 34443211 2345677888888
Q ss_pred HHHHCCcCEEEEc-CCcCCCcHHHHHHHHHHHHHhCC
Q 012949 311 ELHDMGCFEISLG-DTIGVGTPGTVVPMLEAVMAVVP 346 (452)
Q Consensus 311 ~l~~~Gad~I~L~-DT~G~~~P~~v~~li~~l~~~~p 346 (452)
.+.++|+|.+-+. =..--.+++.+.+.++.+.+..+
T Consensus 90 ~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~ 126 (294)
T 2ehh_A 90 HAKEVGADGALVVVPYYNKPTQRGLYEHFKTVAQEVD 126 (294)
T ss_dssp HHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCC
T ss_pred HHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 8889999866553 33333467778888888877754
No 330
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=85.59 E-value=4.7 Score=45.87 Aligned_cols=136 Identities=14% Similarity=0.152 Sum_probs=78.2
Q ss_pred hHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhC-CCcEEEEEEeeecCCCCCCCCHHHHHHHHH
Q 012949 232 GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVL-SIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 310 (452)
Q Consensus 232 ~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~-G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~ 310 (452)
.++.+.++|+|.|.|-++.-....+..+|.+...-.+.+.++++.+|+. +++|.+-+. ++ .+.+.++++
T Consensus 653 ~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~~Pv~vK~~-----~~-----~~~~~~~a~ 722 (1025)
T 1gte_A 653 LSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIPFFAKLT-----PN-----VTDIVSIAR 722 (1025)
T ss_dssp HHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCSSCEEEEEC-----SC-----SSCHHHHHH
T ss_pred HHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhhCCceEEEeC-----CC-----hHHHHHHHH
Confidence 5566667899988886542111111123332222345555666776664 777764332 22 234677888
Q ss_pred HHHHCCcCEEEEcCCc-------------------------CCCcH---HHHHHHHHHHHHhCCCccEEEEeCCCcCcHH
Q 012949 311 ELHDMGCFEISLGDTI-------------------------GVGTP---GTVVPMLEAVMAVVPVEKLAVHLHDTYGQSL 362 (452)
Q Consensus 311 ~l~~~Gad~I~L~DT~-------------------------G~~~P---~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ 362 (452)
.+.++|+|.|.+..|. |+..| ....++++.+++.+|.++|-.=.-=..+
T Consensus 723 ~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~~~~~ipvi~~GGI~s~--- 799 (1025)
T 1gte_A 723 AAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARALPGFPILATGGIDSA--- 799 (1025)
T ss_dssp HHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHHHSTTCCEEEESSCCSH---
T ss_pred HHHHcCCCEEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHHHHcCCCCEEEecCcCCH---
Confidence 9999999999994321 11111 1124688888888865666543333222
Q ss_pred HHHHHHHHcCCCEEeecc
Q 012949 363 PNILISLQMGISTVDCSV 380 (452)
Q Consensus 363 ANaLaAl~aGa~~VD~Sv 380 (452)
..+..++.+||+.|-..-
T Consensus 800 ~da~~~l~~Ga~~v~vg~ 817 (1025)
T 1gte_A 800 ESGLQFLHSGASVLQVCS 817 (1025)
T ss_dssp HHHHHHHHTTCSEEEESH
T ss_pred HHHHHHHHcCCCEEEEee
Confidence 456667779999876644
No 331
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=85.51 E-value=7.9 Score=35.44 Aligned_cols=171 Identities=14% Similarity=0.068 Sum_probs=89.6
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhc-cCCceeEEecchhhhhhhhhhhhhccchhhh
Q 012949 145 VPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDL-EGARLPVLTPNLKVILQRSILFQQCHASVIS 223 (452)
Q Consensus 145 ~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~-~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~ 223 (452)
.+.++-+++++.+.+ .++.+++|....-.+. .++++.+++. ++..+. . ..+ ..++.
T Consensus 13 ~~~~~~~~~~~~~~~-~v~~~kv~~~~f~~~G------~~~i~~l~~~~p~~~v~--l-D~k-------------l~dip 69 (216)
T 1q6o_A 13 QTMDSAYETTRLIAE-EVDIIEVGTILCVGEG------VRAVRDLKALYPHKIVL--A-DAK-------------IADAG 69 (216)
T ss_dssp SSHHHHHHHHHHHGG-GCSEEEECHHHHHHHC------THHHHHHHHHCTTSEEE--E-EEE-------------ECSCH
T ss_pred CCHHHHHHHHHHhcc-cCCEEEECHHHHHHhC------HHHHHHHHHhCCCCeEE--E-EEE-------------ecccH
Confidence 356777778877764 5788999842100011 1356666653 233321 1 011 00011
Q ss_pred hhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHH
Q 012949 224 SNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPS 303 (452)
Q Consensus 224 ~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e 303 (452)
..-++.+.++|++.|.+-....+ +.+.++++.+++.|..+.+.+...+ + .
T Consensus 70 ------~t~~~~~~~~Gad~itvh~~~g~---------------~~l~~~~~~~~~~g~~~~~~ll~~~--------t-~ 119 (216)
T 1q6o_A 70 ------KILSRMCFEANADWVTVICCADI---------------NTAKGALDVAKEFNGDVQIELTGYW--------T-W 119 (216)
T ss_dssp ------HHHHHHHHHTTCSEEEEETTSCH---------------HHHHHHHHHHHHTTCEEEEEECSCC--------C-H
T ss_pred ------HHHHHHHHhCCCCEEEEeccCCH---------------HHHHHHHHHHHHcCCCceeeeeeCC--------C-h
Confidence 01345788999999988765432 2244667888888988653332111 1 1
Q ss_pred HHHHHHHHHHHCCcCEEEE---cCC--cCCC-cHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEe
Q 012949 304 KVAYVAKELHDMGCFEISL---GDT--IGVG-TPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVD 377 (452)
Q Consensus 304 ~l~~~a~~l~~~Gad~I~L---~DT--~G~~-~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD 377 (452)
.-.+.+.+.|.+.+.+ .++ .|.. .|+.+..+-+.+.. ..+|.+ +-|....|+-.++++||+.|-
T Consensus 120 ---~~~~~l~~~~~~~~vl~~a~~~~~~G~~g~~~~i~~lr~~~~~---~~~i~v----~GGI~~~~~~~~~~aGad~iv 189 (216)
T 1q6o_A 120 ---EQAQQWRDAGIGQVVYHRSRDAQAAGVAWGEADITAIKRLSDM---GFKVTV----TGGLALEDLPLFKGIPIHVFI 189 (216)
T ss_dssp ---HHHHHHHHTTCCEEEEECCHHHHHTTCCCCHHHHHHHHHHHHT---TCEEEE----ESSCCGGGGGGGTTSCCSEEE
T ss_pred ---hhHHHHHhcCcHHHHHHHHHHHHhcCCCCCHHHHHHHHHhcCC---CCcEEE----ECCcChhhHHHHHHcCCCEEE
Confidence 1223334557777766 333 2333 46666554333311 223444 234444556778899999765
Q ss_pred e
Q 012949 378 C 378 (452)
Q Consensus 378 ~ 378 (452)
+
T Consensus 190 v 190 (216)
T 1q6o_A 190 A 190 (216)
T ss_dssp E
T ss_pred E
Confidence 4
No 332
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=85.50 E-value=5.7 Score=37.15 Aligned_cols=118 Identities=7% Similarity=-0.044 Sum_probs=65.9
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCC--CCHHHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGA--IPPSKVAYV 308 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r--~d~e~l~~~ 308 (452)
+.++.+.++|.+.|-++..- ..+. ....-..+.++.+.+++.|+++.. ++..++.++... ...+.+.+.
T Consensus 19 ~~l~~~~~~G~~~vEl~~~~-~~~~-------~~~~~~~~~~~~~~l~~~gl~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 89 (286)
T 3dx5_A 19 DIVQFAYENGFEGIELWGTH-AQNL-------YMQEYETTERELNCLKDKTLEITM-ISDYLDISLSADFEKTIEKCEQL 89 (286)
T ss_dssp HHHHHHHHTTCCEEEEEHHH-HHHH-------HHHCHHHHHHHHHHTGGGTCCEEE-EECCCCCSTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEcccc-cccc-------cccCHHHHHHHHHHHHHcCCeEEE-EecCCCCCCchhHHHHHHHHHHH
Confidence 47889999999999996421 1000 000113455667788899999863 322222222211 113466778
Q ss_pred HHHHHHCCcCEEEEc-CCc--CCCcHHHHHHHHHHHHHh---C--CCccEEEEeCCC
Q 012949 309 AKELHDMGCFEISLG-DTI--GVGTPGTVVPMLEAVMAV---V--PVEKLAVHLHDT 357 (452)
Q Consensus 309 a~~l~~~Gad~I~L~-DT~--G~~~P~~v~~li~~l~~~---~--p~~~l~vH~Hnd 357 (452)
++.+.++|++.|.+. -.. +...+.....+++.+++. . -++.|.+|.|..
T Consensus 90 i~~A~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~ 146 (286)
T 3dx5_A 90 AILANWFKTNKIRTFAGQKGSADFSQQERQEYVNRIRMICELFAQHNMYVLLETHPN 146 (286)
T ss_dssp HHHHHHHTCCEEEECSCSSCGGGSCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCTT
T ss_pred HHHHHHhCCCEEEEcCCCCCcccCcHHHHHHHHHHHHHHHHHHHHhCCEEEEecCCC
Confidence 888888999988762 111 122333334443333322 1 246899999854
No 333
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A
Probab=85.21 E-value=32 Score=35.89 Aligned_cols=251 Identities=13% Similarity=0.093 Sum_probs=126.7
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHH---HHHhc-c-CCceeEEecchhhhhhhhhhhhhcc
Q 012949 144 TVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVME---AVRDL-E-GARLPVLTPNLKVILQRSILFQQCH 218 (452)
Q Consensus 144 ~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~---~i~~~-~-~~~l~~l~~~~~~~i~r~~~~~~~~ 218 (452)
.++..++..| +...+.|++.|-+.|- .+++++.+ .++.. . .+.+.+.+-+..
T Consensus 169 ~ltekD~~Di-~~~l~~gvD~I~lsfV---------~saeDv~~~~~~l~~~~~~~i~IiakIEt~e------------- 225 (470)
T 1e0t_A 169 ALAEKDKQDL-IFGCEQGVDFVAASFI---------RKRSDVIEIREHLKAHGGENIHIISKIENQE------------- 225 (470)
T ss_dssp SSCHHHHHHH-HHHHHHTCSEEEESSC---------CSHHHHHHHHHHHHTTTCTTCEEEEEECSHH-------------
T ss_pred CCCcCCHHHH-HHHHHcCCCEEEECCC---------CCHHHHHHHHHHHHHhcCCCceEEEEECCHH-------------
Confidence 3666776666 5556679999988542 33444444 33332 1 233333332211
Q ss_pred chhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCC-C
Q 012949 219 ASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPV-E 297 (452)
Q Consensus 219 ~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~-~ 297 (452)
-.+.++..++. .|. ++++-.|.-.+ ...++.......++..|+++|.+|...-.+ .-+.. .
T Consensus 226 ----------av~nldeI~~~-sDg--ImVargDLgve----ig~e~v~~~qk~ii~~araaGkpvI~ATQM-LeSMi~~ 287 (470)
T 1e0t_A 226 ----------GLNNFDEILEA-SDG--IMVARGDLGVE----IPVEEVIFAQKMMIEKCIRARKVVITATMM-LDSMIKN 287 (470)
T ss_dssp ----------HHHTHHHHHHH-SSE--EEEEHHHHHHH----SCHHHHHHHHHHHHHHHHHHTCEEEEECC---------
T ss_pred ----------HHHhHHHHHHH-CCE--EEECchHhhhh----cCHHHHHHHHHHHHHHHHHcCCCEEEechh-hHhhccC
Confidence 01234444443 564 44444554333 224566666678899999999987521111 00001 1
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEc-CCcCCCcHHHHHHHHHHHHHhCCC-cc----EEEEe--CC-CcCcHHHHHHHH
Q 012949 298 GAIPPSKVAYVAKELHDMGCFEISLG-DTIGVGTPGTVVPMLEAVMAVVPV-EK----LAVHL--HD-TYGQSLPNILIS 368 (452)
Q Consensus 298 ~r~d~e~l~~~a~~l~~~Gad~I~L~-DT~G~~~P~~v~~li~~l~~~~p~-~~----l~vH~--Hn-d~GlA~ANaLaA 368 (452)
.+.+..++.+++.+..+ |+|.|.|. .|+-.-.|.+..+++..+..+.-. .. +.-+. ++ +-..|.|...+|
T Consensus 288 p~PTRAEvsDVanAV~d-G~DavMLSgETA~G~yPveaV~~m~~I~~~~E~~~~~~~~~~~~~~~~~~~~aia~aa~~~a 366 (470)
T 1e0t_A 288 PRPTDAEAGDVANAILD-GTDAVMLSGESAKGKYPLEAVSIMATICERTDRVMNSRLEFNNDNRKLRITEAVCRGAVETA 366 (470)
T ss_dssp -CCCHHHHHHHHHHHHH-TCSEEEECCC------CHHHHHHHHHHHHHHHTTCCCCCC---------CHHHHHHHHHHHH
T ss_pred CCccHHHHhhhhHhhhc-CccEEEecccccCCCCHHHHHHHHHHHHHHHHhhhhhhHHHhhhccccchHHHHHHHHHHHH
Confidence 23456788888888776 89999994 566666888877777766654311 10 11011 11 112455555667
Q ss_pred HHcCCC-EEeecccCCCC------CCCCCCCCCcccHHHHHHHHHc-CCCCC-----CCChhhHHHHHHHHHHHhCCCCC
Q 012949 369 LQMGIS-TVDCSVAGLGG------CPYAKGASGNVATEDVVYMLSG-LGVET-----NVDLRKLMLAGDFINKHLGRPSG 435 (452)
Q Consensus 369 l~aGa~-~VD~Sv~GlGe------cP~a~graGNaalE~vv~~L~~-~Gi~t-----~iDl~~L~~la~~v~~~~g~~~p 435 (452)
...+|. +|-.|-.|--. .|-+|- -..++-+.+...|.- .|+.+ .-|.+.+...+.......|.--+
T Consensus 367 ~~l~a~aIv~~T~sG~ta~~isr~RP~~pI-~a~t~~~~~~r~l~l~~GV~p~~~~~~~~~~~~~~~a~~~~~~~g~~~~ 445 (470)
T 1e0t_A 367 EKLDAPLIVVATQGGKSARAVRKYFPDATI-LALTTNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHK 445 (470)
T ss_dssp HHTTCSBEEEECSSSHHHHHHHTTCCSSBE-EEEESCHHHHHHGGGSTTEEEEECSCCCSHHHHHHHHHHHHHHTSSSCT
T ss_pred HhcCCCEEEEECCChhHHHHHHhhCCCCCE-EEECCCHHHHHHhhhhccceEEEecCCCCHHHHHHHHHHHHHHCCCCCC
Confidence 778887 55566555321 111111 123455677666664 35432 23456665555555555565444
Q ss_pred CC
Q 012949 436 SK 437 (452)
Q Consensus 436 ~~ 437 (452)
..
T Consensus 446 GD 447 (470)
T 1e0t_A 446 GD 447 (470)
T ss_dssp TC
T ss_pred cC
Confidence 43
No 334
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=85.09 E-value=2.7 Score=40.74 Aligned_cols=83 Identities=13% Similarity=0.047 Sum_probs=68.6
Q ss_pred CCCCCHHHHHHHHHHHHHCCcCEEEEcCCcC---CCcHHHHHHHHHHHHHhCCC-ccEEEE-eCCCcCcHHHHHHHHHHc
Q 012949 297 EGAIPPSKVAYVAKELHDMGCFEISLGDTIG---VGTPGTVVPMLEAVMAVVPV-EKLAVH-LHDTYGQSLPNILISLQM 371 (452)
Q Consensus 297 ~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G---~~~P~~v~~li~~l~~~~p~-~~l~vH-~Hnd~GlA~ANaLaAl~a 371 (452)
.+..|.+.+.++++.+.+.|++.|.++-|+| .+++++-.++++.+++...+ ++|-+| .+|+..-++..+..|-++
T Consensus 15 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~ 94 (289)
T 2yxg_A 15 NKEVDFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDV 94 (289)
T ss_dssp TTEECHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhc
Confidence 3568899999999999999999999999988 57888888999988877643 556554 556778888899999999
Q ss_pred CCCEEeec
Q 012949 372 GISTVDCS 379 (452)
Q Consensus 372 Ga~~VD~S 379 (452)
|||.+=..
T Consensus 95 Gadavlv~ 102 (289)
T 2yxg_A 95 GADAVLSI 102 (289)
T ss_dssp TCSEEEEE
T ss_pred CCCEEEEC
Confidence 99977655
No 335
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=85.00 E-value=17 Score=35.04 Aligned_cols=101 Identities=12% Similarity=0.047 Sum_probs=64.7
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 310 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~ 310 (452)
+.++..++.|++.+-+.-+..|.. -.|.+|-.+-++.+++.++. .++|.+.+ +..+.+...++++
T Consensus 25 ~lv~~li~~Gv~gl~~~GttGE~~-----~Ls~~Er~~v~~~~~~~~~g-r~pviaGv---------g~~~t~~ai~la~ 89 (289)
T 2yxg_A 25 ENINFLIENGVSGIVAVGTTGESP-----TLSHEEHKKVIEKVVDVVNG-RVQVIAGA---------GSNCTEEAIELSV 89 (289)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGG-----GSCHHHHHHHHHHHHHHHTT-SSEEEEEC---------CCSSHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEECccccChh-----hCCHHHHHHHHHHHHHHhCC-CCcEEEeC---------CCCCHHHHHHHHH
Confidence 366777889999988887777753 35667766666666655543 24443211 2335677778888
Q ss_pred HHHHCCcCEEEEc-CCcCCCcHHHHHHHHHHHHHhCC
Q 012949 311 ELHDMGCFEISLG-DTIGVGTPGTVVPMLEAVMAVVP 346 (452)
Q Consensus 311 ~l~~~Gad~I~L~-DT~G~~~P~~v~~li~~l~~~~p 346 (452)
.+.++|+|.+-+. =..--.+++.+.+.++.+.+..+
T Consensus 90 ~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~ 126 (289)
T 2yxg_A 90 FAEDVGADAVLSITPYYNKPTQEGLRKHFGKVAESIN 126 (289)
T ss_dssp HHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCS
T ss_pred HHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 8888888865543 33333466777777777777654
No 336
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=84.97 E-value=6.3 Score=36.72 Aligned_cols=121 Identities=9% Similarity=-0.004 Sum_probs=63.8
Q ss_pred hHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcE---EEEEEe--eecCCCCC--CCCHHH
Q 012949 232 GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPV---RGYVSC--VVGCPVEG--AIPPSK 304 (452)
Q Consensus 232 ~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V---~~~l~~--~~g~p~~~--r~d~e~ 304 (452)
.++.+.+.|.+.|.++... +.. -.....+. +.+.++.+.+++.|+++ .+...+ .++.++.. ....+.
T Consensus 17 ~l~~~~~~G~~~iEl~~~~-~~~-~~~~~~~~----~~~~~~~~~l~~~gl~~~~~~~h~~~~~~~~~~~~~~r~~~~~~ 90 (287)
T 2x7v_A 17 VPQDTVNIGGNSFQIFPHN-ARS-WSAKLPSD----EAATKFKREMKKHGIDWENAFCHSGYLINLASPKDDIWQKSVEL 90 (287)
T ss_dssp HHHHHHHTTCSEEEECSCC-CSS-SCCCCCCH----HHHHHHHHHHHHHTCCGGGEEEECCTTCCTTCSSHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEeCCC-ccc-ccccCCCH----HHHHHHHHHHHHcCCCcceeEEecccccccCCCCHHHHHHHHHH
Confidence 6788999999999996421 100 00001121 23445667788899984 321111 01111100 011245
Q ss_pred HHHHHHHHHHCCcCEEEEcC--CcCCCcHHHHHHHHHHHH---HhCCCccEEEEeCCCc
Q 012949 305 VAYVAKELHDMGCFEISLGD--TIGVGTPGTVVPMLEAVM---AVVPVEKLAVHLHDTY 358 (452)
Q Consensus 305 l~~~a~~l~~~Gad~I~L~D--T~G~~~P~~v~~li~~l~---~~~p~~~l~vH~Hnd~ 358 (452)
+.+.++.+.++|++.|.+.= ..+.........+++.++ +...++.|.+|.|+..
T Consensus 91 ~~~~i~~A~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~l~~l~~~~~gv~l~lEn~~~~ 149 (287)
T 2x7v_A 91 LKKEVEICRKLGIRYLNIHPGSHLGTGEEEGIDRIVRGLNEVLNNTEGVVILLENVSQK 149 (287)
T ss_dssp HHHHHHHHHHHTCCEEEECCEECTTSCHHHHHHHHHHHHHHHHTTCCSCEEEEECCCCC
T ss_pred HHHHHHHHHHcCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHcccCCCEEEEeCCCCC
Confidence 66778888889999887731 112112233344444444 3334578999999764
No 337
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=84.90 E-value=9.8 Score=37.34 Aligned_cols=133 Identities=15% Similarity=0.212 Sum_probs=82.6
Q ss_pred HHHHHcCCCEEEEEe-cCCh-HHHhhh-cCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHH
Q 012949 234 EAAIAAGAKEVAIFA-SASE-AFSKSN-INCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 310 (452)
Q Consensus 234 e~a~~~Gi~~V~i~~-s~Sd-~~~~~~-~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~ 310 (452)
..+.++|++.|.+.. +++- .+-..- .-.|.++.+..++.+.+. ..++|.+.+ |.. --+++.+.+.++
T Consensus 36 ~l~e~aGf~ai~vs~~s~a~~~~G~pD~~~vt~~em~~~~~~I~r~---~~~PviaD~------d~G-yg~~~~v~~~v~ 105 (298)
T 3eoo_A 36 KMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNA---TNLPLLVDI------DTG-WGGAFNIARTIR 105 (298)
T ss_dssp HHHHHHTCSCEEECHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHH---CCSCEEEEC------TTC-SSSHHHHHHHHH
T ss_pred HHHHHcCCCEEEECcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhh---cCCeEEEEC------CCC-CCCHHHHHHHHH
Confidence 445567999888753 3331 111111 134788888877666554 355654322 332 237888999999
Q ss_pred HHHHCCcCEEEEcCCcC-----------CCcHHHHHHHHHHHHHhCCCccEEEEeCCC------cCcHHHHHHHHHHcCC
Q 012949 311 ELHDMGCFEISLGDTIG-----------VGTPGTVVPMLEAVMAVVPVEKLAVHLHDT------YGQSLPNILISLQMGI 373 (452)
Q Consensus 311 ~l~~~Gad~I~L~DT~G-----------~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd------~GlA~ANaLaAl~aGa 373 (452)
.+.++|+..|.|-|.++ +...++..+.|++.++...+..+-+-.--| +--|+.-+.+-.+|||
T Consensus 106 ~l~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa~~~~gldeai~Ra~ay~~AGA 185 (298)
T 3eoo_A 106 SFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMARTDAAAAEGIDAAIERAIAYVEAGA 185 (298)
T ss_dssp HHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHhCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEeehhhhhcCHHHHHHHHHhhHhcCC
Confidence 99999999999999986 334556666677666654222333333322 2226677778889999
Q ss_pred CEE
Q 012949 374 STV 376 (452)
Q Consensus 374 ~~V 376 (452)
|.|
T Consensus 186 D~i 188 (298)
T 3eoo_A 186 DMI 188 (298)
T ss_dssp SEE
T ss_pred CEE
Confidence 966
No 338
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=84.76 E-value=2.8 Score=41.24 Aligned_cols=107 Identities=9% Similarity=0.020 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHCCcCEEEEcCCcC-CCcHHHHH--------HHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHH-HcCC
Q 012949 304 KVAYVAKELHDMGCFEISLGDTIG-VGTPGTVV--------PMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISL-QMGI 373 (452)
Q Consensus 304 ~l~~~a~~l~~~Gad~I~L~DT~G-~~~P~~v~--------~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl-~aGa 373 (452)
.+.++++...++|++.|.+.|+.| .++|.... ++++.+++. |+.++-+|+..+ .+.+..+ +.|+
T Consensus 180 ~~~~~~~~~~~aGad~i~i~d~~~~~lsp~~f~ef~~p~~k~i~~~i~~~-~g~~~i~~~~g~-----~~~l~~l~~~g~ 253 (338)
T 2eja_A 180 TVLAYLKEQIKAGADVVQIFDSWVNNLSLEDYGEYVYPYVNYLISELKDF-SDTPVIYFFRGS-----SSFIDLAVDYRA 253 (338)
T ss_dssp HHHHHHHHHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHH-CCCCEEEEESSH-----HHHHHHHTTSCC
T ss_pred HHHHHHHHHHHhCCCEEEEecCccccCCHHHHHHHhHHHHHHHHHHHhhc-CCCCEEEEcCCc-----HHHHHHHHHcCC
Confidence 344566677789999999999754 56887654 445666655 566788888544 3344444 5788
Q ss_pred CEEeecccCCCCCCCCCCCCCcccHHHHHHHHHcCCCCCCCChhhH----HHHHHHHHHHhC
Q 012949 374 STVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVETNVDLRKL----MLAGDFINKHLG 431 (452)
Q Consensus 374 ~~VD~Sv~GlGecP~a~graGNaalE~vv~~L~~~Gi~t~iDl~~L----~~la~~v~~~~g 431 (452)
+.++. .. .++++++...+ ..-+.-++|...| .++.+.+.+++.
T Consensus 254 d~~~~-----d~---------~~dl~~~~~~~-~~~l~Gn~dp~~l~gt~e~i~~~v~~~l~ 300 (338)
T 2eja_A 254 DALSV-----DW---------SVDIPELFKIY-DKGFQGNLEPAVLYASEEVIEEKTLGLLR 300 (338)
T ss_dssp SEEEC-----CT---------TSCHHHHHHHC-CSEEECCBCGGGGGSCHHHHHHHHHHHHT
T ss_pred CEEEe-----CC---------CCCHHHHHHhC-CeEEEECCCHHHhcCCHHHHHHHHHHHHH
Confidence 87754 22 25677666555 3111113444333 234455555553
No 339
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=84.74 E-value=8.6 Score=37.23 Aligned_cols=83 Identities=10% Similarity=0.067 Sum_probs=69.1
Q ss_pred CCCCHHHHHHHHHHHHH-CCcCEEEEcCCcCC---CcHHHHHHHHHHHHHhCC-CccEEEE-eCCCcCcHHHHHHHHHHc
Q 012949 298 GAIPPSKVAYVAKELHD-MGCFEISLGDTIGV---GTPGTVVPMLEAVMAVVP-VEKLAVH-LHDTYGQSLPNILISLQM 371 (452)
Q Consensus 298 ~r~d~e~l~~~a~~l~~-~Gad~I~L~DT~G~---~~P~~v~~li~~l~~~~p-~~~l~vH-~Hnd~GlA~ANaLaAl~a 371 (452)
+..|.+.+.++++.+.+ .|++.|.++-|+|= +++++-.++++.+++... .++|-+| .+|+..-++..+..|-++
T Consensus 19 g~iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~ 98 (293)
T 1f6k_A 19 GTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATEL 98 (293)
T ss_dssp SCBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHhc
Confidence 57899999999999999 99999999999885 888898999999887764 3555554 566778888899999999
Q ss_pred CCCEEeecc
Q 012949 372 GISTVDCSV 380 (452)
Q Consensus 372 Ga~~VD~Sv 380 (452)
|||.+=..-
T Consensus 99 Gadavlv~~ 107 (293)
T 1f6k_A 99 GYDCLSAVT 107 (293)
T ss_dssp TCSEEEEEC
T ss_pred CCCEEEECC
Confidence 999776653
No 340
>2y7e_A 3-keto-5-aminohexanoate cleavage enzyme; lyase, aldolase; 1.28A {Candidatus cloacamonas acidaminovoransorganism_taxid} PDB: 2y7d_A 2y7f_A* 2y7g_A
Probab=84.64 E-value=5.4 Score=38.94 Aligned_cols=127 Identities=17% Similarity=0.165 Sum_probs=85.5
Q ss_pred CCCHHHHHHHHHHHHHCCcCEEEE----cCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCC
Q 012949 299 AIPPSKVAYVAKELHDMGCFEISL----GDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGIS 374 (452)
Q Consensus 299 r~d~e~l~~~a~~l~~~Gad~I~L----~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~ 374 (452)
+.+|+.+++-+.++.++||..+-+ .|-.....|+.++++++.+|+..|++.|.+-..-..+....--++.++..-+
T Consensus 30 PvTpeEia~~A~~a~~AGAaivHlHvRd~~G~ps~d~~~~~e~~~~IR~~~pd~ii~~TTg~~~~~~~eeR~~~~~~~Pe 109 (282)
T 2y7e_A 30 PITPEEQAKEAKACFEAGARVIHLHIREDDGRPSQRLDRFQEAISAIREVVPEIIIQISTGGAVGESFDKRLAPLALKPE 109 (282)
T ss_dssp CCSHHHHHHHHHHHHHHTEEEEEECEECTTSCEECCHHHHHHHHHHHHHHCTTSEEEECSSCSTTCCHHHHHGGGGGCCS
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEeecCCCCCcCCCHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCHHHHHHHhhcCCC
Confidence 368899999999999999865443 4555677899999999999988888777776644433344444455544555
Q ss_pred EEeecccCCCCCCCCCC--CCCcccHHHHHHHHHcCCCCCC---CChhhHHHHHHHHHH
Q 012949 375 TVDCSVAGLGGCPYAKG--ASGNVATEDVVYMLSGLGVETN---VDLRKLMLAGDFINK 428 (452)
Q Consensus 375 ~VD~Sv~GlGecP~a~g--raGNaalE~vv~~L~~~Gi~t~---iDl~~L~~la~~v~~ 428 (452)
+...++ |..=|... ......+++++..+++.|+.+. +|...|..+..++.+
T Consensus 110 ~asl~~---gs~Nf~~~v~~n~~~~~~~~~~~~~e~Gv~pE~e~fd~g~l~~~~~l~~~ 165 (282)
T 2y7e_A 110 MATLNA---GTLNFGDDIFINHPADIIRLAEAFKQYNVVPEVEVYESGMVDAVARLIKK 165 (282)
T ss_dssp EEEEEC---CCEEETTEEECCCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHT
T ss_pred EEEecc---cccccccccccCCHHHHHHHHHHHHHcCCeEEEEEECHHHHHHHHHHHHc
Confidence 543332 22001000 1223568999999998898763 899999988887766
No 341
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=84.59 E-value=14 Score=32.54 Aligned_cols=68 Identities=21% Similarity=0.261 Sum_probs=41.2
Q ss_pred HHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCC-cEEEEEEeeecCCCCCCCCHHHHHHHHHH
Q 012949 233 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSI-PVRGYVSCVVGCPVEGAIPPSKVAYVAKE 311 (452)
Q Consensus 233 ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~-~V~~~l~~~~g~p~~~r~d~e~l~~~a~~ 311 (452)
++.+.+.+.+.|.+...... .++.+.++++..|+.|. .+.+. +| +....+.+ ..
T Consensus 62 v~aa~~~~~diV~lS~~~~~-------------~~~~~~~~i~~L~~~g~~~i~v~----vG----G~~~~~~~----~~ 116 (161)
T 2yxb_A 62 AMAAVQEDVDVIGVSILNGA-------------HLHLMKRLMAKLRELGADDIPVV----LG----GTIPIPDL----EP 116 (161)
T ss_dssp HHHHHHTTCSEEEEEESSSC-------------HHHHHHHHHHHHHHTTCTTSCEE----EE----ECCCHHHH----HH
T ss_pred HHHHHhcCCCEEEEEeechh-------------hHHHHHHHHHHHHhcCCCCCEEE----Ee----CCCchhcH----HH
Confidence 34566677888888765432 24666778888888775 23211 22 22223332 34
Q ss_pred HHHCCcCEEEEcCC
Q 012949 312 LHDMGCFEISLGDT 325 (452)
Q Consensus 312 l~~~Gad~I~L~DT 325 (452)
+.+.|+|.++..|+
T Consensus 117 l~~~G~d~v~~~~~ 130 (161)
T 2yxb_A 117 LRSLGIREIFLPGT 130 (161)
T ss_dssp HHHTTCCEEECTTC
T ss_pred HHHCCCcEEECCCC
Confidence 56789999887776
No 342
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=84.58 E-value=3.2 Score=40.28 Aligned_cols=81 Identities=19% Similarity=0.112 Sum_probs=68.1
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCcCC---CcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCC
Q 012949 298 GAIPPSKVAYVAKELHDMGCFEISLGDTIGV---GTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGIS 374 (452)
Q Consensus 298 ~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~ 374 (452)
+..|.+-+.++++.+.+.|++.|.++-|+|= +++++-.++++.+++...+ -+.=-.+|+..-++..+..|-++|||
T Consensus 15 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g-ViaGvg~~~t~~ai~la~~A~~~Gad 93 (288)
T 2nuw_A 15 GKVNVDALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHK-LIFQVGSLNLNDVMELVKFSNEMDIL 93 (288)
T ss_dssp SCBCHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSC-EEEECCCSCHHHHHHHHHHHHTSCCS
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-eEEeeCCCCHHHHHHHHHHHHhcCCC
Confidence 5789999999999999999999999999985 7888889999999887766 23334667778888899999999999
Q ss_pred EEeec
Q 012949 375 TVDCS 379 (452)
Q Consensus 375 ~VD~S 379 (452)
.+=..
T Consensus 94 avlv~ 98 (288)
T 2nuw_A 94 GVSSH 98 (288)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 77654
No 343
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=84.49 E-value=23 Score=34.44 Aligned_cols=101 Identities=11% Similarity=0.082 Sum_probs=68.7
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 310 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~ 310 (452)
+.++..++.|++.|-+.-+..|. .-.|.+|-.+-++.+++.++. .++|.+.+ +..+.+...++++
T Consensus 41 ~lv~~li~~Gv~gl~v~GttGE~-----~~Ls~~Er~~v~~~~~~~~~g-rvpviaGv---------g~~st~~ai~la~ 105 (304)
T 3cpr_A 41 EVAAYLVDKGLDSLVLAGTTGES-----PTTTAAEKLELLKAVREEVGD-RAKLIAGV---------GTNNTRTSVELAE 105 (304)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTT-----TTSCHHHHHHHHHHHHHHHTT-TSEEEEEC---------CCSCHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECccccCh-----hhCCHHHHHHHHHHHHHHhCC-CCcEEecC---------CCCCHHHHHHHHH
Confidence 36677788999999888777774 345777777766666666543 34443211 2345678888999
Q ss_pred HHHHCCcCEEEE-cCCcCCCcHHHHHHHHHHHHHhCC
Q 012949 311 ELHDMGCFEISL-GDTIGVGTPGTVVPMLEAVMAVVP 346 (452)
Q Consensus 311 ~l~~~Gad~I~L-~DT~G~~~P~~v~~li~~l~~~~p 346 (452)
.+.++|+|.+-+ +=..--.+++.+.+.++.+.+..+
T Consensus 106 ~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~ 142 (304)
T 3cpr_A 106 AAASAGADGLLVVTPYYSKPSQEGLLAHFGAIAAATE 142 (304)
T ss_dssp HHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCC
T ss_pred HHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999999996654 333444567888888888887754
No 344
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=84.43 E-value=27 Score=33.32 Aligned_cols=123 Identities=8% Similarity=0.027 Sum_probs=68.3
Q ss_pred hHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHHH
Q 012949 232 GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKE 311 (452)
Q Consensus 232 ~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~ 311 (452)
..+..++.|++.|.|-....+ .+.++-++++...++. ..++++. + |.. ++ +++++
T Consensus 30 ~a~~~v~~GAdiIDIg~g~~~--------v~~~ee~~rvv~~i~~--~~~~pis------I---DT~--~~----~v~~a 84 (262)
T 1f6y_A 30 WARRQEEGGARALDLNVGPAV--------QDKVSAMEWLVEVTQE--VSNLTLC------L---DST--NI----KAIEA 84 (262)
T ss_dssp HHHHHHHHTCSEEEEBCC------------CHHHHHHHHHHHHHT--TCCSEEE------E---ECS--CH----HHHHH
T ss_pred HHHHHHHCCCcEEEECCCCCC--------CChHHHHHHHHHHHHH--hCCCeEE------E---eCC--CH----HHHHH
Confidence 445566789999999864322 2445556655555543 1244443 1 222 23 45555
Q ss_pred HHHC--CcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCc----------HHHHHHHHHHcCCC----E
Q 012949 312 LHDM--GCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQ----------SLPNILISLQMGIS----T 375 (452)
Q Consensus 312 l~~~--Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~Gl----------A~ANaLaAl~aGa~----~ 375 (452)
+.++ |++.|+ |..|. .+.+.+++..+++ +...-+..|.. ..|. .....-.|.++|+. +
T Consensus 85 Al~a~~Ga~iIN--dvs~~--~d~~~~~~~~~a~-~~~~vvlmh~~-~~G~p~t~~~~~~~~~~~~~~a~~~Gi~~~~Ii 158 (262)
T 1f6y_A 85 GLKKCKNRAMIN--STNAE--REKVEKLFPLAVE-HGAALIGLTMN-KTGIPKDSDTRLAFAMELVAAADEFGLPMEDLY 158 (262)
T ss_dssp HHHHCSSCEEEE--EECSC--HHHHHHHHHHHHH-TTCEEEEESCC-SSCSCSSHHHHHHHHHHHHHHHHHHTCCGGGEE
T ss_pred HHhhCCCCCEEE--ECCCC--cccHHHHHHHHHH-hCCcEEEEcCC-CCCCCCCHHHHHHHHHHHHHHHHHCCCCcccEE
Confidence 5665 888775 55555 3444556665544 44433566652 2344 12334457789996 7
Q ss_pred EeecccCCCC
Q 012949 376 VDCSVAGLGG 385 (452)
Q Consensus 376 VD~Sv~GlGe 385 (452)
+|..+.++|.
T Consensus 159 lDPg~g~~g~ 168 (262)
T 1f6y_A 159 IDPLILPANV 168 (262)
T ss_dssp EECCCCCTTT
T ss_pred EeCCCCcCCC
Confidence 8999865554
No 345
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=84.40 E-value=9.9 Score=36.96 Aligned_cols=128 Identities=16% Similarity=0.081 Sum_probs=76.4
Q ss_pred hHHHHHHcCCCEEEEEecCChHHHh--hhcCCCHHHHHHHHHHHHHHHHhCCCc-EEEEEEeeecCCCCCC-CCHHHHHH
Q 012949 232 GFEAAIAAGAKEVAIFASASEAFSK--SNINCSIEDSLVRYRAVAHAAKVLSIP-VRGYVSCVVGCPVEGA-IPPSKVAY 307 (452)
Q Consensus 232 ~ie~a~~~Gi~~V~i~~s~Sd~~~~--~~~~~s~e~~l~~~~~~v~~Ak~~G~~-V~~~l~~~~g~p~~~r-~d~e~l~~ 307 (452)
....+-++|++.|.+-.++.-...- .-...|.++.+...+.+.+.+ ... |.+ ..|+.+. .+++...+
T Consensus 29 sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~---~~~~vva------D~pfgsy~~s~~~a~~ 99 (275)
T 1o66_A 29 FAALMDDAGVEMLLVGDSLGMAVQGRKSTLPVSLRDMCYHTECVARGA---KNAMIVS------DLPFGAYQQSKEQAFA 99 (275)
T ss_dssp HHHHHHHTTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHC---SSSEEEE------ECCTTSSSSCHHHHHH
T ss_pred HHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhC---CCCeEEE------ECCCCCccCCHHHHHH
Confidence 4455667999988553333211000 012456888877665554433 222 221 2345443 57899999
Q ss_pred HHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeC------CCc------------CcHHHHHHHHH
Q 012949 308 VAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLH------DTY------------GQSLPNILISL 369 (452)
Q Consensus 308 ~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~H------nd~------------GlA~ANaLaAl 369 (452)
.+.++.++||+.|.|-|. .++.+.|+++.+. .+|+--|.= |.+ --++.-+.+-.
T Consensus 100 na~rl~kaGa~aVklEdg------~e~~~~I~al~~a--gIpV~gHiGLtPQs~~~~ggf~v~grt~~a~~~i~rA~a~~ 171 (275)
T 1o66_A 100 AAAELMAAGAHMVKLEGG------VWMAETTEFLQMR--GIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQALLNDAKAHD 171 (275)
T ss_dssp HHHHHHHTTCSEEEEECS------GGGHHHHHHHHHT--TCCEEEEEESCGGGTTC-----------CHHHHHHHHHHHH
T ss_pred HHHHHHHcCCcEEEECCc------HHHHHHHHHHHHc--CCCeEeeeccCceeecccCCeEEEeChHHHHHHHHHHHHHH
Confidence 888999999999999997 3567777777764 223333321 111 23455666777
Q ss_pred HcCCCEE
Q 012949 370 QMGISTV 376 (452)
Q Consensus 370 ~aGa~~V 376 (452)
+|||+.|
T Consensus 172 eAGA~~i 178 (275)
T 1o66_A 172 DAGAAVV 178 (275)
T ss_dssp HTTCSEE
T ss_pred HcCCcEE
Confidence 8999965
No 346
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=84.37 E-value=3.8 Score=39.62 Aligned_cols=82 Identities=12% Similarity=0.097 Sum_probs=68.9
Q ss_pred CCCCCHHHHHHHHHHHHHCCcCEEEEcCCcCC---CcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCC
Q 012949 297 EGAIPPSKVAYVAKELHDMGCFEISLGDTIGV---GTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGI 373 (452)
Q Consensus 297 ~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa 373 (452)
.+..|.+-+.++++.+.+.|++.|.++-|+|= +++++-.++++.+++...+ -+.=-.+++..-++..+..|-++||
T Consensus 13 dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g-vi~Gvg~~~t~~ai~la~~A~~~Ga 91 (286)
T 2r91_A 13 GGRLDPELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR-VIVQVASLNADEAIALAKYAESRGA 91 (286)
T ss_dssp TTEECHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS-EEEECCCSSHHHHHHHHHHHHHTTC
T ss_pred CCccCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-EEEeeCCCCHHHHHHHHHHHHhcCC
Confidence 35688999999999999999999999999885 7889999999999988866 2333466778888889999999999
Q ss_pred CEEeec
Q 012949 374 STVDCS 379 (452)
Q Consensus 374 ~~VD~S 379 (452)
|.+=..
T Consensus 92 davlv~ 97 (286)
T 2r91_A 92 EAVASL 97 (286)
T ss_dssp SEEEEC
T ss_pred CEEEEc
Confidence 977654
No 347
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=84.32 E-value=9.7 Score=39.75 Aligned_cols=131 Identities=17% Similarity=0.179 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhc-cCCceeEEecchhhhhhhhhhhhhccchhhhhhh
Q 012949 148 GVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDL-EGARLPVLTPNLKVILQRSILFQQCHASVISSNL 226 (452)
Q Consensus 148 ~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~-~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~ 226 (452)
++-.+.++.|.++|++.|++..... . + ....+.++.+++. ++..+ ++.+..
T Consensus 228 ~~~~~~a~~l~~aG~d~I~id~a~g-~--~--~~~~~~v~~i~~~~p~~~V--i~g~v~--------------------- 279 (490)
T 4avf_A 228 ADTGERVAALVAAGVDVVVVDTAHG-H--S--KGVIERVRWVKQTFPDVQV--IGGNIA--------------------- 279 (490)
T ss_dssp TTHHHHHHHHHHTTCSEEEEECSCC-S--B--HHHHHHHHHHHHHCTTSEE--EEEEEC---------------------
T ss_pred cchHHHHHHHhhcccceEEecccCC-c--c--hhHHHHHHHHHHHCCCceE--EEeeeC---------------------
Confidence 3456778899999999999975321 1 0 1123444555432 33332 222111
Q ss_pred hccHHhHHHHHHcCCCEEEEEecC-Ch--HHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHH
Q 012949 227 WVYLQGFEAAIAAGAKEVAIFASA-SE--AFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPS 303 (452)
Q Consensus 227 ~~~~~~ie~a~~~Gi~~V~i~~s~-Sd--~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e 303 (452)
+.++++.+.++|+|.|.+-... +. .+....++.. .+..+.++.+.+++.+++|.+ +.+-.+++
T Consensus 280 --t~e~a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~p---~~~~l~~v~~~~~~~~iPVIa---------~GGI~~~~ 345 (490)
T 4avf_A 280 --TAEAAKALAEAGADAVKVGIGPGSICTTRIVAGVGVP---QISAIANVAAALEGTGVPLIA---------DGGIRFSG 345 (490)
T ss_dssp --SHHHHHHHHHTTCSEEEECSSCSTTCHHHHHTCBCCC---HHHHHHHHHHHHTTTTCCEEE---------ESCCCSHH
T ss_pred --cHHHHHHHHHcCCCEEEECCCCCcCCCccccCCCCcc---HHHHHHHHHHHhccCCCcEEE---------eCCCCCHH
Confidence 2357888999999999973211 11 1111112222 345556677777778888752 23445666
Q ss_pred HHHHHHHHHHHCCcCEEEEcC
Q 012949 304 KVAYVAKELHDMGCFEISLGD 324 (452)
Q Consensus 304 ~l~~~a~~l~~~Gad~I~L~D 324 (452)
.+.+.. ++||+.+.+.=
T Consensus 346 di~kal----~~GAd~V~vGs 362 (490)
T 4avf_A 346 DLAKAM----VAGAYCVMMGS 362 (490)
T ss_dssp HHHHHH----HHTCSEEEECT
T ss_pred HHHHHH----HcCCCeeeecH
Confidence 666543 45999888864
No 348
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=84.31 E-value=17 Score=35.95 Aligned_cols=100 Identities=17% Similarity=0.089 Sum_probs=65.9
Q ss_pred hHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHHH
Q 012949 232 GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKE 311 (452)
Q Consensus 232 ~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~ 311 (452)
-++..++.|++.|-+.-+..|.. -.|.+|-.+-++.+++.++. .++|.+.+ +..+.+...++++.
T Consensus 60 lv~~li~~Gv~Gl~v~GtTGE~~-----~Ls~eEr~~vi~~~ve~~~g-rvpViaGv---------g~~st~eai~la~~ 124 (332)
T 2r8w_A 60 LIARLDAAEVDSVGILGSTGIYM-----YLTREERRRAIEAAATILRG-RRTLMAGI---------GALRTDEAVALAKD 124 (332)
T ss_dssp HHHHHHHHTCSEEEESSTTTTGG-----GSCHHHHHHHHHHHHHHHTT-SSEEEEEE---------CCSSHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECccccChh-----hCCHHHHHHHHHHHHHHhCC-CCcEEEec---------CCCCHHHHHHHHHH
Confidence 56677788999988887777753 35677777666666665543 34454222 22356777888888
Q ss_pred HHHCCcCEEEEc-CCcCCCcHHHHHHHHHHHHHhCC
Q 012949 312 LHDMGCFEISLG-DTIGVGTPGTVVPMLEAVMAVVP 346 (452)
Q Consensus 312 l~~~Gad~I~L~-DT~G~~~P~~v~~li~~l~~~~p 346 (452)
+.++|+|.+-+. =..--.+++.+.+.++.+.+..+
T Consensus 125 A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~ 160 (332)
T 2r8w_A 125 AEAAGADALLLAPVSYTPLTQEEAYHHFAAVAGATA 160 (332)
T ss_dssp HHHHTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCS
T ss_pred HHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 888898866553 23333466778888888777654
No 349
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=84.29 E-value=2.1 Score=41.56 Aligned_cols=82 Identities=9% Similarity=-0.039 Sum_probs=67.5
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCcC---CCcHHHHHHHHHHHHHhCCC-ccEEEE-eCCCcCcHHHHHHHHHHcC
Q 012949 298 GAIPPSKVAYVAKELHDMGCFEISLGDTIG---VGTPGTVVPMLEAVMAVVPV-EKLAVH-LHDTYGQSLPNILISLQMG 372 (452)
Q Consensus 298 ~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G---~~~P~~v~~li~~l~~~~p~-~~l~vH-~Hnd~GlA~ANaLaAl~aG 372 (452)
+..|.+.+.++++.+.+.|++.|.++-|+| .+++++-.++++.+++...+ ++|-+| .+++..-++..+..|-++|
T Consensus 17 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~G 96 (292)
T 2ojp_A 17 GNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSG 96 (292)
T ss_dssp SCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTTSS
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHhcC
Confidence 578999999999999999999999999988 67888888999988876543 456554 5567777888888888999
Q ss_pred CCEEeec
Q 012949 373 ISTVDCS 379 (452)
Q Consensus 373 a~~VD~S 379 (452)
|+.+=..
T Consensus 97 adavlv~ 103 (292)
T 2ojp_A 97 IVGCLTV 103 (292)
T ss_dssp CSEEEEE
T ss_pred CCEEEEC
Confidence 9977554
No 350
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=84.14 E-value=5.7 Score=41.75 Aligned_cols=68 Identities=15% Similarity=0.100 Sum_probs=51.6
Q ss_pred HHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEee
Q 012949 305 VAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDC 378 (452)
Q Consensus 305 l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~ 378 (452)
..+.++.+.++|++.|.+-.+-| .+..+.++|+.+++.+|+.++.+-.=. ....+..++++||+.|.+
T Consensus 257 ~~era~aLveaGvd~I~Id~a~g--~~~~v~~~i~~i~~~~~~~~vi~g~v~----t~e~a~~~~~aGad~i~v 324 (511)
T 3usb_A 257 AMTRIDALVKASVDAIVLDTAHG--HSQGVIDKVKEVRAKYPSLNIIAGNVA----TAEATKALIEAGANVVKV 324 (511)
T ss_dssp HHHHHHHHHHTTCSEEEEECSCT--TSHHHHHHHHHHHHHCTTSEEEEEEEC----SHHHHHHHHHHTCSEEEE
T ss_pred hHHHHHHHHhhccceEEeccccc--chhhhhhHHHHHHHhCCCceEEeeeec----cHHHHHHHHHhCCCEEEE
Confidence 34567788999999999965543 467888999999999987666543211 345678899999999996
No 351
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=84.04 E-value=6 Score=38.79 Aligned_cols=135 Identities=12% Similarity=0.027 Sum_probs=77.8
Q ss_pred HHHHHHcCCCEEEEE-ecCChHHHhhh-cCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHH
Q 012949 233 FEAAIAAGAKEVAIF-ASASEAFSKSN-INCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 310 (452)
Q Consensus 233 ie~a~~~Gi~~V~i~-~s~Sd~~~~~~-~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~ 310 (452)
...+.++|++.|.+. .+++-.+-..- ...|.++.+..++.+.+. ..++|.+-+ |.. --+++.+.+.++
T Consensus 32 A~~~~~aG~~ai~vsg~~~a~~lG~pD~~~vt~~em~~~~~~I~~~---~~~PviaD~------d~G-yg~~~~v~~~v~ 101 (295)
T 1s2w_A 32 ARIVQEAGFKGIWGSGLSVSAQLGVRDSNEASWTQVVEVLEFMSDA---SDVPILLDA------DTG-YGNFNNARRLVR 101 (295)
T ss_dssp HHHHHHHTCSCEEECCHHHHHTC---------CHHHHHHHHHHHHT---CSSCEEEEC------CSS-CSSHHHHHHHHH
T ss_pred HHHHHHcCCCEEEeChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhc---CCCCEEecC------CCC-CCCHHHHHHHHH
Confidence 344556799988776 33331111111 123556666555444432 345654333 222 225678889999
Q ss_pred HHHHCCcCEEEEcCCc--------C----CCcH-HHHHHHHHHHHHhCCCccEEEEeCCCc-------CcHHHHHHHHHH
Q 012949 311 ELHDMGCFEISLGDTI--------G----VGTP-GTVVPMLEAVMAVVPVEKLAVHLHDTY-------GQSLPNILISLQ 370 (452)
Q Consensus 311 ~l~~~Gad~I~L~DT~--------G----~~~P-~~v~~li~~l~~~~p~~~l~vH~Hnd~-------GlA~ANaLaAl~ 370 (452)
.+.++|+..|.|-|.. | .+.| ++..+.|+++++......+-+-.-.|- --++.-+.+-.+
T Consensus 102 ~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~aRtda~~a~~g~~~ai~Ra~ay~e 181 (295)
T 1s2w_A 102 KLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQTDPDFCIVARVEAFIAGWGLDEALKRAEAYRN 181 (295)
T ss_dssp HHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEECTTTTTCCHHHHHHHHHHHHH
T ss_pred HHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHHhccccHHHHHHHHHHHHH
Confidence 9999999999999997 3 2444 456677777777642222333333221 246777888889
Q ss_pred cCCCEEe
Q 012949 371 MGISTVD 377 (452)
Q Consensus 371 aGa~~VD 377 (452)
|||+.|=
T Consensus 182 AGAd~i~ 188 (295)
T 1s2w_A 182 AGADAIL 188 (295)
T ss_dssp TTCSEEE
T ss_pred cCCCEEE
Confidence 9999653
No 352
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=84.01 E-value=31 Score=36.38 Aligned_cols=258 Identities=14% Similarity=0.097 Sum_probs=139.9
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhc-cCCceeEEecchhhhhhhhhhhhhccchhh
Q 012949 144 TVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDL-EGARLPVLTPNLKVILQRSILFQQCHASVI 222 (452)
Q Consensus 144 ~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~-~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i 222 (452)
.++..++..|.+.-.+.|+|+|-+.|-.++ .|-.++.+.+... ....+.+.+-+..
T Consensus 204 ~lTekD~~Dl~~f~~~~~vD~Ia~SFVr~a------~Dv~~~r~~l~~~~~~~~iiaKIE~~e----------------- 260 (511)
T 3gg8_A 204 VIGEKDKHDILNFGIPMGCNFIAASFVQSA------DDVRYIRGLLGPRGRHIRIIPKIENVE----------------- 260 (511)
T ss_dssp SSCHHHHHHHHHTTTTTTCCEEEETTCCSH------HHHHHHHHHHTGGGTTCEEEEEECSHH-----------------
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEcCCCCH------HHHHHHHHHHHhcCCCCeEEEEECCHH-----------------
Confidence 367788888867788899999988653222 1333333344332 2334433332221
Q ss_pred hhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCC-CCCCCC
Q 012949 223 SSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCP-VEGAIP 301 (452)
Q Consensus 223 ~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p-~~~r~d 301 (452)
-.+.++..++. .|.|.|. -.|.-.+ ...++.....+++++.|+++|.+|...-.+ .-+. ...+.+
T Consensus 261 ------av~nldeIl~~-sDgimVa--RGDLgve----i~~e~v~~~qk~ii~~~~~~gkpvi~ATQm-LeSMi~~p~PT 326 (511)
T 3gg8_A 261 ------GLVNFDEILAE-ADGIMIA--RGDLGME----IPPEKVFLAQKMMIAKCNVVGKPVITATQM-LESMIKNPRPT 326 (511)
T ss_dssp ------HHHTHHHHHHH-CSCEEEE--HHHHHHH----SCHHHHHHHHHHHHHHHHHTTCCEEEESSS-SGGGGTCSSCC
T ss_pred ------HHHhHHHHHHh-CCeEEEe--cchhcCc----CCHHHHHHHHHHHHHHHHHcCCCeEEehHH-HHHhhcCCCcc
Confidence 01234444443 3666654 2233222 235666777788999999999997521111 1011 112445
Q ss_pred HHHHHHHHHHHHHCCcCEEEEc-CCcCCCcHHHHHHHHHHHHHhCCC-ccE--EE-----EeCC--Cc--CcHHHHHHHH
Q 012949 302 PSKVAYVAKELHDMGCFEISLG-DTIGVGTPGTVVPMLEAVMAVVPV-EKL--AV-----HLHD--TY--GQSLPNILIS 368 (452)
Q Consensus 302 ~e~l~~~a~~l~~~Gad~I~L~-DT~G~~~P~~v~~li~~l~~~~p~-~~l--~v-----H~Hn--d~--GlA~ANaLaA 368 (452)
..++.+++.+..+ |+|.|.|. .|+-.-.|.+..+++..+..+.-. ... .+ +.+. +. ..|.|...+|
T Consensus 327 RAEvsDVAnAV~d-GaDavMLSgETA~G~yPveaV~~M~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A 405 (511)
T 3gg8_A 327 RAEAADVANAVLD-GTDCVMLSGETANGEFPVITVETMARICYEAETCVDYPALYRAMCLAVPPPISTQEAVARAAVETA 405 (511)
T ss_dssp HHHHHHHHHHHHH-TCSEEEESHHHHTCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSCSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-CCCEEEecccccCCCCHHHHHHHHHHHHHHHHhchhHHHHHhhhhhcccCCCCHHHHHHHHHHHHH
Confidence 6788888888776 89999994 666667898887777776654311 000 00 1111 11 2445555667
Q ss_pred HHcCCC-EEeecccCCCC------CCCCCCCCCcccHHHHHHHHHcC-CCCC-----CCChhhHHHHHHHHHHHhCCCCC
Q 012949 369 LQMGIS-TVDCSVAGLGG------CPYAKGASGNVATEDVVYMLSGL-GVET-----NVDLRKLMLAGDFINKHLGRPSG 435 (452)
Q Consensus 369 l~aGa~-~VD~Sv~GlGe------cP~a~graGNaalE~vv~~L~~~-Gi~t-----~iDl~~L~~la~~v~~~~g~~~p 435 (452)
...+|. +|-.|-.|--. -|-+|- -..++-+.+...|.-+ |+.+ .-|.+.+...+.......|.--+
T Consensus 406 ~~l~a~aIv~~T~SG~tA~~iSr~RP~~PI-ia~T~~~~~~r~l~L~~GV~p~~~~~~~~~d~~~~~a~~~~~~~g~~~~ 484 (511)
T 3gg8_A 406 ECVNAAIILALTETGQTARLIAKYRPMQPI-LALSASESTIKHLQVIRGVTTMQVPSFQGTDHVIRNAIVVAKERELVTE 484 (511)
T ss_dssp HHHTCSEEEEECSSSHHHHHHHHTCCSSCE-EEEESCHHHHHHGGGSTTEEEEECCC--CHHHHHHHHHHHHHHTTSCCT
T ss_pred HhcCCCEEEEECCCchHHHHHHhhCCCCCE-EEEcCCHHHHHHhhccCCeEEEEeCCCCCHHHHHHHHHHHHHHCCCCCC
Confidence 788888 56667776311 011111 1234557777666643 5532 23455555555555555665555
Q ss_pred CCccc
Q 012949 436 SKTAI 440 (452)
Q Consensus 436 ~~~pi 440 (452)
...-+
T Consensus 485 GD~vV 489 (511)
T 3gg8_A 485 GESIV 489 (511)
T ss_dssp TCEEE
T ss_pred cCEEE
Confidence 44444
No 353
>3e49_A Uncharacterized protein DUF849 with A TIM barrel; structural genomics, joint center for structural genomics; HET: MSE; 1.75A {Burkholderia xenovorans LB400}
Probab=83.97 E-value=9.2 Score=37.77 Aligned_cols=129 Identities=14% Similarity=0.164 Sum_probs=89.3
Q ss_pred CCCHHHHHHHHHHHHHCCcCEEEE-----cCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHc-C
Q 012949 299 AIPPSKVAYVAKELHDMGCFEISL-----GDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQM-G 372 (452)
Q Consensus 299 r~d~e~l~~~a~~l~~~Gad~I~L-----~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~a-G 372 (452)
+.+|+.+++-+.++.++||..|-| .|-.....|+.+++++..+|++.|. .|.+-..-..++....=++.+.. .
T Consensus 28 PvTpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~~~e~~~~IR~~~d~-iI~~TTgg~~~~~~eerla~~~~~~ 106 (311)
T 3e49_A 28 PVTPDEVAQASIGAAEAGAAVIHLHARDPRDGRPTQDPAAFAEFLPRIKSNTDA-VINLTTGGSPHMTVEERLRPATHYM 106 (311)
T ss_dssp CCSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHTTHHHHHHHHCCC-EEEECSCSCTTSCHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHHHhCCc-EEEECCCCCCCCCHHHHHHHHHhcC
Confidence 468899999999999999876655 3556688899999999999998764 56666666677777777777643 5
Q ss_pred CCEEeecccC--CCCCCCCC------------------C---CCCcccHHHHHHHHHcCCCCCC---CChhhHHHHHHHH
Q 012949 373 ISTVDCSVAG--LGGCPYAK------------------G---ASGNVATEDVVYMLSGLGVETN---VDLRKLMLAGDFI 426 (452)
Q Consensus 373 a~~VD~Sv~G--lGecP~a~------------------g---raGNaalE~vv~~L~~~Gi~t~---iDl~~L~~la~~v 426 (452)
-++.....+- +|..|.+. . ......+++++..++..|+.+. +|...|..+..++
T Consensus 107 Pe~aSln~gs~Nf~~~~~~~~~~~~~~~~e~~~~~~~~~~v~~n~~~~i~~~~~~~~e~Gi~pE~e~fd~g~l~~~~~l~ 186 (311)
T 3e49_A 107 PELASLNMGSMNFGLYPMLERFKEFAHGWEREHLERSRDLVFKNTFADIEFILKTCGGNGTRFEFECYDTSHLYNLAHFV 186 (311)
T ss_dssp CSEEEEECSCEECCCGGGGGTCCCCSSHHHHHHHHGGGGCEECCCHHHHHHHHHHHHTTTCEEEEEECSHHHHHHHHHHH
T ss_pred CCeeeecCCCcccccccchhhccccccccchhhcccCCCceecCCHHHHHHHHHHHHHcCCeeEEEEECHHHHHHHHHHH
Confidence 5655333222 33212110 0 0112358888888888898753 8889999888877
Q ss_pred HH
Q 012949 427 NK 428 (452)
Q Consensus 427 ~~ 428 (452)
.+
T Consensus 187 ~~ 188 (311)
T 3e49_A 187 DR 188 (311)
T ss_dssp HT
T ss_pred Hc
Confidence 66
No 354
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=83.96 E-value=12 Score=36.96 Aligned_cols=117 Identities=18% Similarity=0.095 Sum_probs=68.0
Q ss_pred hHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEee--ecCCCC------CCCCH-
Q 012949 232 GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCV--VGCPVE------GAIPP- 302 (452)
Q Consensus 232 ~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~--~g~p~~------~r~d~- 302 (452)
.++.++++|+..||+.+-+.+. -+. ..++.+.++++.||++|++|-..+=+. +..|-. -..+.
T Consensus 32 ~~~ilk~~G~N~VRi~~w~~P~-----~g~---~~~~~~~~~~~~A~~~GlkV~ld~Hysd~WadPg~Q~~p~~W~~~~~ 103 (332)
T 1hjs_A 32 LENILAANGVNTVRQRVWVNPA-----DGN---YNLDYNIAIAKRAKAAGLGVYIDFHYSDTWADPAHQTMPAGWPSDID 103 (332)
T ss_dssp HHHHHHHTTCCEEEEEECSSCT-----TCT---TSHHHHHHHHHHHHHTTCEEEEEECCSSSCCBTTBCBCCTTCCCSHH
T ss_pred HHHHHHHCCCCEEEEeeeeCCC-----CCc---CCHHHHHHHHHHHHHCCCEEEEEeccCCCcCCccccCCccccccchH
Confidence 6677789999999997644332 011 125667788899999999987554220 101110 00111
Q ss_pred -------HHHHHHHHHHHHCC--cCEEEEcC--CcCCC-------cHHHHHHH----HHHHHHhC--CCccEEEEeCC
Q 012949 303 -------SKVAYVAKELHDMG--CFEISLGD--TIGVG-------TPGTVVPM----LEAVMAVV--PVEKLAVHLHD 356 (452)
Q Consensus 303 -------e~l~~~a~~l~~~G--ad~I~L~D--T~G~~-------~P~~v~~l----i~~l~~~~--p~~~l~vH~Hn 356 (452)
++..++++.+.+.| ++.+.+.- +.|.+ ......++ ++.+|+.. |..++.+|..+
T Consensus 104 ~~~~~~~~yt~~vl~~l~~~g~~~~~v~vGNEi~~g~~w~~g~~~~~~~~~~l~~~~~~avR~~~~~p~~~v~ih~~~ 181 (332)
T 1hjs_A 104 NLSWKLYNYTLDAANKLQNAGIQPTIVSIGNEIRAGLLWPTGRTENWANIARLLHSAAWGIKDSSLSPKPKIMIHLDN 181 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCSEEEESSSGGGEETBTTEETTCHHHHHHHHHHHHHHHHTSCCSSCCEEEEEESC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCEEEEeecccccccCcCCCccCHHHHHHHHHHHHHHHHHhccCCCCeEEEEeCC
Confidence 23345667777777 45554433 12222 33555444 44566666 77778888876
No 355
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=83.88 E-value=3.3 Score=40.23 Aligned_cols=81 Identities=17% Similarity=0.120 Sum_probs=68.1
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCcCC---CcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCC
Q 012949 298 GAIPPSKVAYVAKELHDMGCFEISLGDTIGV---GTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGIS 374 (452)
Q Consensus 298 ~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~ 374 (452)
+..|.+.+.++++.+.+.|++.|.++-|+|= +++++-.++++.+++...+ -+.=-.+++..-++..+..|-++||+
T Consensus 15 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g-viaGvg~~~t~~ai~la~~A~~~Gad 93 (293)
T 1w3i_A 15 NRIDKEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK-IIFQVGGLNLDDAIRLAKLSKDFDIV 93 (293)
T ss_dssp SSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC-EEEECCCSCHHHHHHHHHHGGGSCCS
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC-EEEecCCCCHHHHHHHHHHHHhcCCC
Confidence 5789999999999999999999999999885 7888999999999988765 23334667778888888889999999
Q ss_pred EEeec
Q 012949 375 TVDCS 379 (452)
Q Consensus 375 ~VD~S 379 (452)
.+=..
T Consensus 94 avlv~ 98 (293)
T 1w3i_A 94 GIASY 98 (293)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 77554
No 356
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=83.78 E-value=4 Score=40.72 Aligned_cols=83 Identities=10% Similarity=-0.001 Sum_probs=69.2
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCcCC---CcHHHHHHHHHHHHHhCC-CccEEEEe-CCCcCcHHHHHHHHHHcC
Q 012949 298 GAIPPSKVAYVAKELHDMGCFEISLGDTIGV---GTPGTVVPMLEAVMAVVP-VEKLAVHL-HDTYGQSLPNILISLQMG 372 (452)
Q Consensus 298 ~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~li~~l~~~~p-~~~l~vH~-Hnd~GlA~ANaLaAl~aG 372 (452)
+..|.+.+.++++.+.+.|++.|.++-|+|= +++++-.++++.+++... .++|-++. +++..-++..+..|-++|
T Consensus 47 g~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~G 126 (343)
T 2v9d_A 47 GQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAG 126 (343)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcC
Confidence 5789999999999999999999999999985 788888899998887764 35666654 577788888999999999
Q ss_pred CCEEeecc
Q 012949 373 ISTVDCSV 380 (452)
Q Consensus 373 a~~VD~Sv 380 (452)
||.|=..-
T Consensus 127 adavlv~~ 134 (343)
T 2v9d_A 127 ADGIVVIN 134 (343)
T ss_dssp CSEEEEEC
T ss_pred CCEEEECC
Confidence 99776553
No 357
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=83.77 E-value=16 Score=35.22 Aligned_cols=101 Identities=16% Similarity=0.079 Sum_probs=65.4
Q ss_pred HhHHHHHH-cCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHH
Q 012949 231 QGFEAAIA-AGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVA 309 (452)
Q Consensus 231 ~~ie~a~~-~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a 309 (452)
+.++..++ .|++.|-+.-+..|. .-.|.+|-.+-++.+++.++. .++|.+.+ +..+.+...+++
T Consensus 28 ~lv~~li~~~Gv~gl~~~GttGE~-----~~Ls~~Er~~v~~~~~~~~~g-rvpviaGv---------g~~~t~~ai~la 92 (293)
T 1f6k_A 28 QIIRHNIDKMKVDGLYVGGSTGEN-----FMLSTEEKKEIFRIAKDEAKD-QIALIAQV---------GSVNLKEAVELG 92 (293)
T ss_dssp HHHHHHHHTSCCSEEEESSGGGTG-----GGSCHHHHHHHHHHHHHHHTT-SSEEEEEC---------CCSCHHHHHHHH
T ss_pred HHHHHHHhhCCCcEEEeCccccch-----hhCCHHHHHHHHHHHHHHhCC-CCeEEEec---------CCCCHHHHHHHH
Confidence 36677788 999998887776664 335677777666666665543 34443211 234567778888
Q ss_pred HHHHHCCcCEEEEc-CCcCCCcHHHHHHHHHHHHHhCC
Q 012949 310 KELHDMGCFEISLG-DTIGVGTPGTVVPMLEAVMAVVP 346 (452)
Q Consensus 310 ~~l~~~Gad~I~L~-DT~G~~~P~~v~~li~~l~~~~p 346 (452)
+.+.++|+|.+-+. =..--.+++.+.+.++.+.+..+
T Consensus 93 ~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~ 130 (293)
T 1f6k_A 93 KYATELGYDCLSAVTPFYYKFSFPEIKHYYDTIIAETG 130 (293)
T ss_dssp HHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHC
T ss_pred HHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 88888888865543 33333466777777777777654
No 358
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=83.75 E-value=11 Score=37.90 Aligned_cols=127 Identities=13% Similarity=0.194 Sum_probs=68.5
Q ss_pred HHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEecchhhhhhhhhhhhhccchhhhhhhhccH
Q 012949 151 VELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLWVYL 230 (452)
Q Consensus 151 ~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~~~~ 230 (452)
.+.++.+.++|++.|++.+.... | ....+.++.+++..+.. +++-+.. +.
T Consensus 107 ~e~a~~l~eaGad~I~ld~a~G~---~--~~~~~~i~~i~~~~~~~--Vivg~v~-----------------------t~ 156 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSAHGH---S--LNIIRTLKEIKSKMNID--VIVGNVV-----------------------TE 156 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCS---B--HHHHHHHHHHHHHCCCE--EEEEEEC-----------------------SH
T ss_pred HHHHHHHHHcCcCeEEEeCCCCC---c--HHHHHHHHHHHHhcCCc--EEEccCC-----------------------CH
Confidence 67788999999999998643210 1 01112333333322333 3221111 23
Q ss_pred HhHHHHHHcCCCEEEEEecCChH---HHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEA---FSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAY 307 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~---~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~ 307 (452)
+.++.+.++|+|.|.+....-.. ......+.. .+..+.++.+.+++.+++|.+ +.+-.+++.+.+
T Consensus 157 e~A~~l~~aGaD~I~VG~~~Gs~~~tr~~~g~g~p---~~~~i~~v~~~~~~~~iPVIA---------~GGI~~~~di~k 224 (361)
T 3khj_A 157 EATKELIENGADGIKVGIGPGSICTTRIVAGVGVP---QITAIEKCSSVASKFGIPIIA---------DGGIRYSGDIGK 224 (361)
T ss_dssp HHHHHHHHTTCSEEEECSSCCTTCCHHHHTCBCCC---HHHHHHHHHHHHHHHTCCEEE---------ESCCCSHHHHHH
T ss_pred HHHHHHHHcCcCEEEEecCCCcCCCcccccCCCCC---cHHHHHHHHHHHhhcCCeEEE---------ECCCCCHHHHHH
Confidence 47888999999999984211111 111112222 234445555666667888752 234445666554
Q ss_pred HHHHHHHCCcCEEEEc
Q 012949 308 VAKELHDMGCFEISLG 323 (452)
Q Consensus 308 ~a~~l~~~Gad~I~L~ 323 (452)
. ..+||+.|.+.
T Consensus 225 a----la~GAd~V~vG 236 (361)
T 3khj_A 225 A----LAVGASSVMIG 236 (361)
T ss_dssp H----HHHTCSEEEES
T ss_pred H----HHcCCCEEEEC
Confidence 3 34699988875
No 359
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7}
Probab=83.69 E-value=21 Score=37.70 Aligned_cols=258 Identities=13% Similarity=0.099 Sum_probs=137.5
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhc-cCCceeEEecchhhhhhhhhhhhhccchhh
Q 012949 144 TVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDL-EGARLPVLTPNLKVILQRSILFQQCHASVI 222 (452)
Q Consensus 144 ~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~-~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i 222 (452)
.++..++..|.+...+.|+|.|-+.|-.++ .|..++.+.+... ....+.+.+-+..
T Consensus 213 ~lTekD~~dl~~f~~~~~vD~Ia~SFVr~a------~Dv~~~r~~l~~~g~~i~IIAKIE~~e----------------- 269 (520)
T 3khd_A 213 IISEKDKNDILNFAIPMGCNFIAASFIQSA------DDVRLIRNLLGPRGRHIKIIPKIENIE----------------- 269 (520)
T ss_dssp SSCHHHHHHHHHTHHHHTCCEEEETTCCSH------HHHHHHHHHHTTTTTTSEEEEEECSHH-----------------
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCCCH------HHHHHHHHHHHhcCCCCcEEEEECCHH-----------------
Confidence 367788888878888999999998653222 1223333333322 1233333332221
Q ss_pred hhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCC-CCCCCC
Q 012949 223 SSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCP-VEGAIP 301 (452)
Q Consensus 223 ~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p-~~~r~d 301 (452)
-++.++..++. .|.|.|. -.|.-. -...++....-+++++.|+++|.+|.+.-.+ .-+. ...+.+
T Consensus 270 ------av~nldeIl~~-sDGIMVA--RGDLgv----Ei~~e~vp~~Qk~iI~~c~~aGKPVi~ATQM-LeSMi~~p~PT 335 (520)
T 3khd_A 270 ------GIIHFDKILAE-SDGIMIA--RGDLGM----EISPEKVFLAQKLMISKCNLQGKPIITATQM-LESMTKNPRPT 335 (520)
T ss_dssp ------HHHTHHHHHHH-SSCEEEC--HHHHTT----TSCGGGHHHHHHHHHHHHHHHTCCEEECCCC-CGGGGTCSSCC
T ss_pred ------HHHhHHHHHHh-CCcEEEc--cccccc----cCCHHHHHHHHHHHHHHHHHcCCCeEEeehh-hHHHhcCCCcc
Confidence 01234444443 3655553 223211 1223455555678999999999987521111 1011 112345
Q ss_pred HHHHHHHHHHHHHCCcCEEEEc-CCcCCCcHHHHHHHHHHHHHhCC-CccE--EE-----Ee--CCCc--CcHHHHHHHH
Q 012949 302 PSKVAYVAKELHDMGCFEISLG-DTIGVGTPGTVVPMLEAVMAVVP-VEKL--AV-----HL--HDTY--GQSLPNILIS 368 (452)
Q Consensus 302 ~e~l~~~a~~l~~~Gad~I~L~-DT~G~~~P~~v~~li~~l~~~~p-~~~l--~v-----H~--Hnd~--GlA~ANaLaA 368 (452)
..++.+++.+..+ |+|.|.|. .|+-.-.|-+..+++..+..+.- .... .+ +. ..+. -.|.|...+|
T Consensus 336 RAEvsDVanAVld-GaDavMLSgETA~G~yPveaV~~M~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A 414 (520)
T 3khd_A 336 RAEVTDVANAVLD-GTDCVMLSGETAGGKFPVEAVTIMSKICLEAEACIDYKLLYQSLVNAIETPISVQEAVARSAVETA 414 (520)
T ss_dssp HHHHHHHHHHHHH-TCSEEEESHHHHSCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSCSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-CCCEEEecccccCCcCHHHHHHHHHHHHHHHHhhhhhhhhHhhhhhccCCCCCHHHHHHHHHHHHH
Confidence 6788888888776 89999995 56666789888777777765431 1000 00 00 1111 2344455566
Q ss_pred HHcCCC-EEeecccCCCC------CCCCCCCCCcccHHHHHHHHHcC-CCCC-----CCChhhHHHHHHHHHHHhCCCCC
Q 012949 369 LQMGIS-TVDCSVAGLGG------CPYAKGASGNVATEDVVYMLSGL-GVET-----NVDLRKLMLAGDFINKHLGRPSG 435 (452)
Q Consensus 369 l~aGa~-~VD~Sv~GlGe------cP~a~graGNaalE~vv~~L~~~-Gi~t-----~iDl~~L~~la~~v~~~~g~~~p 435 (452)
...+|. +|-.|-.|--. .|-+|- -..++-+.+...|.-+ |+.+ .-|.+.+.+.+.......|.--+
T Consensus 415 ~~l~a~aIv~~T~SG~TA~~vSr~RP~~PI-ia~T~~~~~~r~l~L~~GV~p~~~~~~~~~d~~~~~a~~~~~~~g~~~~ 493 (520)
T 3khd_A 415 ESIQASLIIALTETGYTARLIAKYKPSCTI-LALSASDSTVKCLNVHRGVTCIKVGSFQGTDIVIRNAIEIAKQRNMAKV 493 (520)
T ss_dssp HHTTCSEEEEECSSSHHHHHHHHTCCSSEE-EEEESCHHHHHHGGGSTTEEEEECCSCCCHHHHHHHHHHHHHHTTSSCT
T ss_pred HhcCCCEEEEECCCcHHHHHHHhcCCCCCE-EEEcCCHHHHHHHhccCCeEEEEeCCCCCHHHHHHHHHHHHHHCCCCCC
Confidence 678888 55666665321 111111 1235557777766643 5532 23566666555555555665545
Q ss_pred CCccc
Q 012949 436 SKTAI 440 (452)
Q Consensus 436 ~~~pi 440 (452)
...-+
T Consensus 494 GD~vV 498 (520)
T 3khd_A 494 GDSVI 498 (520)
T ss_dssp TCEEE
T ss_pred cCEEE
Confidence 44433
No 360
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=83.62 E-value=5.3 Score=41.75 Aligned_cols=70 Identities=14% Similarity=0.114 Sum_probs=52.2
Q ss_pred HHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEeecc
Q 012949 305 VAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCSV 380 (452)
Q Consensus 305 l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~Sv 380 (452)
..+.++.+.++|++.|.| |+. ...|....++++.+++.+|+.++....= ....-+..+.++||+.|++++
T Consensus 256 ~~~~a~~~~~aG~d~v~i-~~~-~G~~~~~~~~i~~i~~~~~~~pvi~~~v----~t~~~a~~l~~aGad~I~vg~ 325 (514)
T 1jcn_A 256 DKYRLDLLTQAGVDVIVL-DSS-QGNSVYQIAMVHYIKQKYPHLQVIGGNV----VTAAQAKNLIDAGVDGLRVGM 325 (514)
T ss_dssp HHHHHHHHHHTTCSEEEE-CCS-CCCSHHHHHHHHHHHHHCTTCEEEEEEE----CSHHHHHHHHHHTCSEEEECS
T ss_pred hHHHHHHHHHcCCCEEEe-ecc-CCcchhHHHHHHHHHHhCCCCceEeccc----chHHHHHHHHHcCCCEEEECC
Confidence 456778889999999998 332 2356677899999999997777765311 335567888999999999955
No 361
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=83.60 E-value=19 Score=35.24 Aligned_cols=101 Identities=15% Similarity=0.058 Sum_probs=67.3
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 310 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~ 310 (452)
+-++..++.|++.|-+.-+..|. .-.|.+|-.+-++.+++.++. .++|.+.+ +..+.+...++++
T Consensus 49 ~lv~~li~~Gv~Gi~v~GtTGE~-----~~Ls~~Er~~v~~~~v~~~~g-rvpViaGv---------g~~~t~~ai~la~ 113 (315)
T 3na8_A 49 RSIERLIDGGVHAIAPLGSTGEG-----AYLSDPEWDEVVDFTLKTVAH-RVPTIVSV---------SDLTTAKTVRRAQ 113 (315)
T ss_dssp HHHHHHHHTTCSEEECSSGGGTG-----GGSCHHHHHHHHHHHHHHHTT-SSCBEEEC---------CCSSHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECccccCh-----hhCCHHHHHHHHHHHHHHhCC-CCcEEEec---------CCCCHHHHHHHHH
Confidence 36677788999998888777764 345677777666666666543 24444211 2345677888888
Q ss_pred HHHHCCcCEEEEc-CCcCCCcHHHHHHHHHHHHHhCC
Q 012949 311 ELHDMGCFEISLG-DTIGVGTPGTVVPMLEAVMAVVP 346 (452)
Q Consensus 311 ~l~~~Gad~I~L~-DT~G~~~P~~v~~li~~l~~~~p 346 (452)
.+.++|+|.+-+. =..--.+++.+.+.++.+.+..+
T Consensus 114 ~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~ 150 (315)
T 3na8_A 114 FAESLGAEAVMVLPISYWKLNEAEVFQHYRAVGEAIG 150 (315)
T ss_dssp HHHHTTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCS
T ss_pred HHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 8888998866554 33344567778888888777764
No 362
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A*
Probab=83.58 E-value=47 Score=34.90 Aligned_cols=257 Identities=16% Similarity=0.095 Sum_probs=136.8
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhc-cCCceeEEecchhhhhhhhhhhhhccchhhh
Q 012949 145 VPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDL-EGARLPVLTPNLKVILQRSILFQQCHASVIS 223 (452)
Q Consensus 145 ~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~-~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~ 223 (452)
++..++..| +...+.|++.|-+.|-.++ .|..++.+.+... ..+.+.+.+-+..
T Consensus 190 ltekD~~dl-~~~~~~~vD~i~~sfVr~a------~dv~~~r~~l~~~~~~i~IiaKIE~~e------------------ 244 (499)
T 3hqn_D 190 VSAKDRVDL-QFGVEQGVDMIFASFIRSA------EQVGDVRKALGPKGRDIMIICKIENHQ------------------ 244 (499)
T ss_dssp SCHHHHHHH-HHHHHTTCSEEEETTCCSH------HHHHHHHHHHCGGGTTSEEEEEECSHH------------------
T ss_pred CCHHHHHHH-HHHHHcCCCEEEecCCCCH------HHHHHHHHHHHhcCCCCeEEEEECCHH------------------
Confidence 566676666 6777899999998653222 1223333333321 2334433332221
Q ss_pred hhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCC-CCCCCCH
Q 012949 224 SNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCP-VEGAIPP 302 (452)
Q Consensus 224 ~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p-~~~r~d~ 302 (452)
-.+.++..++. .|.|.|. -.|.-.+ ...++....-+++++.|+++|.+|...-.+ .-+. ...+.+.
T Consensus 245 -----av~nldeIl~~-sDgImVa--RGDLgvE----i~~e~vp~~Qk~iI~~c~~agkpVi~ATQm-LeSMi~~p~PTR 311 (499)
T 3hqn_D 245 -----GVQNIDSIIEE-SDGIMVA--RGDLGVE----IPAEKVVVAQKILISKCNVAGKPVICATQM-LESMTYNPRPTR 311 (499)
T ss_dssp -----HHHTHHHHHHH-SSEEEEE--HHHHHHH----SCHHHHHHHHHHHHHHHHHHTCCEEEESSS-SGGGGTSSSCCH
T ss_pred -----HHHhHHHHHHh-CCcEEEc--cccccCc----CCHHHHHHHHHHHHHHHHHcCCCeEEeehh-HHHhccCCCccH
Confidence 11244554544 5766654 2343222 235666777788999999999997521111 1011 1123456
Q ss_pred HHHHHHHHHHHHCCcCEEEEc-CCcCCCcHHHHHHHHHHHHHhC---CCccEEE---Ee----CCCc--CcHHHHHHHHH
Q 012949 303 SKVAYVAKELHDMGCFEISLG-DTIGVGTPGTVVPMLEAVMAVV---PVEKLAV---HL----HDTY--GQSLPNILISL 369 (452)
Q Consensus 303 e~l~~~a~~l~~~Gad~I~L~-DT~G~~~P~~v~~li~~l~~~~---p~~~l~v---H~----Hnd~--GlA~ANaLaAl 369 (452)
.++.+++.+..+ |+|.|.|. .|.-.-.|-+..+++..+..+. ..-.-.+ +. ..+. -.|.|...+|.
T Consensus 312 AEvsDVanaV~d-G~DavMLSgETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~ 390 (499)
T 3hqn_D 312 AEVSDVANAVFN-GADCVMLSGETAKGKYPNEVVQYMARICLEAQSALNEYVFFNSIKKLQHIPMSADEAVCSSAVNSVY 390 (499)
T ss_dssp HHHHHHHHHHHH-TCSEEEESHHHHTCSCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHTCCSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc-CCcEEEEeccccCCCCHHHHHHHHHHHHHHHHhcchhHHHHhhhhhccCCCCCHHHHHHHHHHHHHH
Confidence 788888887776 89999994 5666668988777777666543 1100000 01 1121 23444555666
Q ss_pred HcCCC-EEeecccCCCC------CCCCCCCCCcccHHHHHHHHHcC-CCCCC-C---------ChhhHHHHHHHHHHHhC
Q 012949 370 QMGIS-TVDCSVAGLGG------CPYAKGASGNVATEDVVYMLSGL-GVETN-V---------DLRKLMLAGDFINKHLG 431 (452)
Q Consensus 370 ~aGa~-~VD~Sv~GlGe------cP~a~graGNaalE~vv~~L~~~-Gi~t~-i---------Dl~~L~~la~~v~~~~g 431 (452)
..+|. +|-.|-.|--. .|-+|- -..++-+.+...|.-+ |+.+- + |.+.+.+.+.......|
T Consensus 391 ~l~a~aIv~~T~SG~tA~~isr~RP~~pI-ia~T~~~~~~r~l~L~~GV~p~~~~~~~~~~~~~~d~~~~~a~~~~~~~g 469 (499)
T 3hqn_D 391 ETKAKAMVVLSNTGRSARLVAKYRPNCPI-VCVTTRLQTCRQLNITQGVESVFFDADKLGHDEGKEHRVAAGVEFAKSKG 469 (499)
T ss_dssp HHTCSEEEEECSSSHHHHHHHHTCCSSCE-EEEESCHHHHHHGGGSTTEEEEECCHHHHCCCTTCHHHHHHHHHHHHHTT
T ss_pred hcCCCEEEEECCCcHHHHHHHhhCCCCCE-EEEcCCHHHHHHhhccCCeEEEEeccccccccCCHHHHHHHHHHHHHHcC
Confidence 78888 55666666311 122221 1235567777777653 65431 1 44555555555555566
Q ss_pred CCCCCCcccc
Q 012949 432 RPSGSKTAIA 441 (452)
Q Consensus 432 ~~~p~~~pi~ 441 (452)
.--+...-++
T Consensus 470 ~~~~GD~vVv 479 (499)
T 3hqn_D 470 YVQTGDYCVV 479 (499)
T ss_dssp SCCTTCEEEE
T ss_pred CCCCcCEEEE
Confidence 5444444333
No 363
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=83.57 E-value=4.3 Score=43.71 Aligned_cols=117 Identities=15% Similarity=0.137 Sum_probs=72.4
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEEEeeecC---------CCC-----CCCCH------------HHHHHHHHHHHHCC
Q 012949 263 IEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGC---------PVE-----GAIPP------------SKVAYVAKELHDMG 316 (452)
Q Consensus 263 ~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~---------p~~-----~r~d~------------e~l~~~a~~l~~~G 316 (452)
.++.++..+++++.+++.|-++.+-|... |- |-+ ....| +.+.+.|+.+.++|
T Consensus 76 ~~~~~~~~~~~~~~vh~~g~~i~~Ql~h~-Gr~~~~~~~~~ps~~~~~~~~~~p~~~t~~ei~~~i~~~~~aA~~a~~aG 154 (671)
T 1ps9_A 76 DASQIPHHRTITEAVHQEGGKIALQILHT-GRYSYQPHLVAPSALQAPINRFVPHELSHEEILQLIDNFARCAQLAREAG 154 (671)
T ss_dssp SGGGHHHHHHHHHHHHHTTCCEEEEECCC-GGGSBSTTCEESSSCCCTTCSSCCEECCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEeccC-CcccCCCCCcCCCCcccccCCCCCccCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 34567777888888999998887667642 10 000 01122 46677888889999
Q ss_pred cCEEEEc-------------------CCcCCCc---HHHHHHHHHHHHHhCC-CccEEEEe------CC--CcCcHHHHH
Q 012949 317 CFEISLG-------------------DTIGVGT---PGTVVPMLEAVMAVVP-VEKLAVHL------HD--TYGQSLPNI 365 (452)
Q Consensus 317 ad~I~L~-------------------DT~G~~~---P~~v~~li~~l~~~~p-~~~l~vH~------Hn--d~GlA~ANa 365 (452)
.|.|.|- |-.|... +..+.++++++++.++ +.+|.+-. |. +...++.-+
T Consensus 155 fd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~~~g~~~~~~~~~a 234 (671)
T 1ps9_A 155 YDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVEDGGTFAETVELA 234 (671)
T ss_dssp CSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCSTTCCCHHHHHHHH
T ss_pred CCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccccCCCCCCHHHHHHHH
Confidence 9988883 3344332 3447889999999885 44554411 22 111222333
Q ss_pred HHHHHcCCCEEeecc
Q 012949 366 LISLQMGISTVDCSV 380 (452)
Q Consensus 366 LaAl~aGa~~VD~Sv 380 (452)
.+.-++|+++|+.+.
T Consensus 235 ~~l~~~g~d~i~v~~ 249 (671)
T 1ps9_A 235 QAIEAAGATIINTGI 249 (671)
T ss_dssp HHHHHHTCSEEEEEE
T ss_pred HHHHhcCCCEEEcCC
Confidence 344479999999864
No 364
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=83.54 E-value=15 Score=35.41 Aligned_cols=101 Identities=12% Similarity=0.108 Sum_probs=67.9
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 310 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~ 310 (452)
+.++..++.|++.|-+.-+..|.+ -.|.+|-.+-++.+++.++. .++|.+.+ +..+.+...++++
T Consensus 26 ~lv~~li~~Gv~gl~~~GttGE~~-----~Ls~~Er~~v~~~~~~~~~g-r~pviaGv---------g~~~t~~ai~la~ 90 (292)
T 2ojp_A 26 KLIDYHVASGTSAIVSVGTTGESA-----TLNHDEHADVVMMTLDLADG-RIPVIAGT---------GANATAEAISLTQ 90 (292)
T ss_dssp HHHHHHHHHTCCEEEESSTTTTGG-----GSCHHHHHHHHHHHHHHHTT-SSCEEEEC---------CCSSHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECccccchh-----hCCHHHHHHHHHHHHHHhCC-CCcEEEec---------CCccHHHHHHHHH
Confidence 366777888999998887777753 35777777766666666543 34554211 2335677888899
Q ss_pred HHHHCCcCEEEE-cCCcCCCcHHHHHHHHHHHHHhCC
Q 012949 311 ELHDMGCFEISL-GDTIGVGTPGTVVPMLEAVMAVVP 346 (452)
Q Consensus 311 ~l~~~Gad~I~L-~DT~G~~~P~~v~~li~~l~~~~p 346 (452)
.+.++|+|.+-+ +=..--.+++.+.+.++.+.+..+
T Consensus 91 ~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~ 127 (292)
T 2ojp_A 91 RFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIAEHTD 127 (292)
T ss_dssp HTTTSSCSEEEEECCCSSCCCHHHHHHHHHHHHTTCS
T ss_pred HHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999999986654 333333577778888888877654
No 365
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=83.41 E-value=2.7 Score=40.89 Aligned_cols=82 Identities=10% Similarity=0.045 Sum_probs=67.4
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCcC---CCcHHHHHHHHHHHHHhCC-CccEEEE-eCCCcCcHHHHHHHHHHcC
Q 012949 298 GAIPPSKVAYVAKELHDMGCFEISLGDTIG---VGTPGTVVPMLEAVMAVVP-VEKLAVH-LHDTYGQSLPNILISLQMG 372 (452)
Q Consensus 298 ~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G---~~~P~~v~~li~~l~~~~p-~~~l~vH-~Hnd~GlA~ANaLaAl~aG 372 (452)
+..|.+.+.++++.+.+.|++.|.++-|+| .+++++-.++++.+.+... .++|-++ .+++..-++..+..|-++|
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~G 95 (292)
T 2vc6_A 16 DRIDEVALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAG 95 (292)
T ss_dssp TEECHHHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcC
Confidence 568999999999999999999999999988 6788888889998887653 2455454 5567778888899999999
Q ss_pred CCEEeec
Q 012949 373 ISTVDCS 379 (452)
Q Consensus 373 a~~VD~S 379 (452)
|+.+=..
T Consensus 96 adavlv~ 102 (292)
T 2vc6_A 96 ADGVLIV 102 (292)
T ss_dssp CSEEEEE
T ss_pred CCEEEEc
Confidence 9977554
No 366
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=83.41 E-value=15 Score=37.09 Aligned_cols=126 Identities=18% Similarity=0.193 Sum_probs=68.6
Q ss_pred HHHHHHHHHCCCCEEEEecCC-CCCcccccCCHHHHHHHHHh-ccCCceeEEecchhhhhhhhhhhhhccchhhhhhhhc
Q 012949 151 VELIRRLVSSGLPVVEATSFV-SPKWVPQLADARDVMEAVRD-LEGARLPVLTPNLKVILQRSILFQQCHASVISSNLWV 228 (452)
Q Consensus 151 ~~i~~~L~~~Gv~~IEvG~~~-s~~~~p~~~D~e~v~~~i~~-~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~~ 228 (452)
.+.++.|.++|++.|++.... .+. ...+.++.+++ .++..+ +.-+. .
T Consensus 110 ~~~~~~lieaGvd~I~idta~G~~~------~~~~~I~~ik~~~p~v~V--i~G~v-----------------------~ 158 (366)
T 4fo4_A 110 EERVKALVEAGVDVLLIDSSHGHSE------GVLQRIRETRAAYPHLEI--IGGNV-----------------------A 158 (366)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTTSH------HHHHHHHHHHHHCTTCEE--EEEEE-----------------------C
T ss_pred HHHHHHHHhCCCCEEEEeCCCCCCH------HHHHHHHHHHHhcCCCce--Eeeee-----------------------C
Confidence 566888999999999985322 111 11122334443 234332 22111 1
Q ss_pred cHHhHHHHHHcCCCEEEEEecC-Ch--HHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHH
Q 012949 229 YLQGFEAAIAAGAKEVAIFASA-SE--AFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKV 305 (452)
Q Consensus 229 ~~~~ie~a~~~Gi~~V~i~~s~-Sd--~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l 305 (452)
+.+.++.+.++|+|.|.+.... +. .+.....+.. .+..+.++.+.+++.+++|.+ +.+-.+++.+
T Consensus 159 t~e~A~~a~~aGAD~I~vG~gpGs~~~tr~~~g~g~p---~~~~l~~v~~~~~~~~iPVIA---------~GGI~~~~di 226 (366)
T 4fo4_A 159 TAEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVP---QITAIADAAGVANEYGIPVIA---------DGGIRFSGDI 226 (366)
T ss_dssp SHHHHHHHHHHTCSEEEECSSCSTTBCHHHHHCCCCC---HHHHHHHHHHHHGGGTCCEEE---------ESCCCSHHHH
T ss_pred CHHHHHHHHHcCCCEEEEecCCCCCCCcccccCcccc---hHHHHHHHHHHHhhcCCeEEE---------eCCCCCHHHH
Confidence 2347888999999999983211 11 1111112222 244455666667778888752 2344456654
Q ss_pred HHHHHHHHHCCcCEEEEc
Q 012949 306 AYVAKELHDMGCFEISLG 323 (452)
Q Consensus 306 ~~~a~~l~~~Gad~I~L~ 323 (452)
.+ +..+||+.|.+.
T Consensus 227 ~k----ala~GAd~V~vG 240 (366)
T 4fo4_A 227 SK----AIAAGASCVMVG 240 (366)
T ss_dssp HH----HHHTTCSEEEES
T ss_pred HH----HHHcCCCEEEEC
Confidence 43 345799988875
No 367
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=83.25 E-value=3.6 Score=39.31 Aligned_cols=95 Identities=21% Similarity=0.337 Sum_probs=59.8
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 310 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~ 310 (452)
+.+++|++.|++.|-+.+.. +....-....+..|+++.+++++|+++|+.|.+ | ++ .+.+.+..++
T Consensus 139 ~qi~aA~~~GA~~IELhTG~---Ya~a~~~~~~~~el~~i~~aa~~A~~lGL~VnA------G---Hg-L~y~Nv~~ia- 204 (243)
T 1m5w_A 139 EQIKAAAEVGAPFIEIHTGC---YADAKTDAEQAQELARIAKAATFAASLGLKVNA------G---HG-LTYHNVKAIA- 204 (243)
T ss_dssp HHHHHHHHTTCSEEEEECHH---HHHCCSHHHHHHHHHHHHHHHHHHHHTTCEEEE------E---SS-CCTTTHHHHH-
T ss_pred HHHHHHHHhCcCEEEEechh---hhcCCCchhHHHHHHHHHHHHHHHHHcCCEEec------C---CC-CCHHHHHHHh-
Confidence 38899999999999998741 222211112456789999999999999999872 1 22 3344454443
Q ss_pred HHHHCCcCEEEE-----cCCcCCCcHHHHHHHHHHH
Q 012949 311 ELHDMGCFEISL-----GDTIGVGTPGTVVPMLEAV 341 (452)
Q Consensus 311 ~l~~~Gad~I~L-----~DT~G~~~P~~v~~li~~l 341 (452)
.+ -+...++| ++.+=++.+..|+++.+.+
T Consensus 205 ~i--p~i~ElnIGHaiia~Al~~Gl~~aV~~m~~~~ 238 (243)
T 1m5w_A 205 AI--PEMHELNIGHAIIGRAVMTGLKDAVAEMKRLM 238 (243)
T ss_dssp TC--TTEEEEEECHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred hC--CCCeEEccCHHHHHHHHHHhHHHHHHHHHHHH
Confidence 11 14566665 3444455666666665555
No 368
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=83.20 E-value=14 Score=42.01 Aligned_cols=78 Identities=13% Similarity=0.108 Sum_probs=59.1
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEEc----CC-----cCC---CcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHH
Q 012949 300 IPPSKVAYVAKELHDMGCFEISLG----DT-----IGV---GTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILI 367 (452)
Q Consensus 300 ~d~e~l~~~a~~l~~~Gad~I~L~----DT-----~G~---~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLa 367 (452)
.+++.+.++++.+.++|+|.|.|- -+ .|. -.|..+.++++.+++.++ +||.+-.--+.--...-+.+
T Consensus 645 ~~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~-~Pv~vK~~~~~~~~~~~a~~ 723 (1025)
T 1gte_A 645 YNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQ-IPFFAKLTPNVTDIVSIARA 723 (1025)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCS-SCEEEEECSCSSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhhC-CceEEEeCCChHHHHHHHHH
Confidence 367899999999999999988882 11 222 468899999999999874 46777655454445666788
Q ss_pred HHHcCCCEEee
Q 012949 368 SLQMGISTVDC 378 (452)
Q Consensus 368 Al~aGa~~VD~ 378 (452)
+.++|++.|.+
T Consensus 724 ~~~~G~d~i~v 734 (1025)
T 1gte_A 724 AKEGGADGVTA 734 (1025)
T ss_dssp HHHHTCSEEEE
T ss_pred HHHcCCCEEEE
Confidence 88999999988
No 369
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=83.13 E-value=2.9 Score=40.84 Aligned_cols=84 Identities=13% Similarity=0.045 Sum_probs=68.7
Q ss_pred CCCCCHHHHHHHHHHHHHCCcCEEEEcCCcC---CCcHHHHHHHHHHHHHhCCC-ccEEEE-eCCCcCcHHHHHHHHHHc
Q 012949 297 EGAIPPSKVAYVAKELHDMGCFEISLGDTIG---VGTPGTVVPMLEAVMAVVPV-EKLAVH-LHDTYGQSLPNILISLQM 371 (452)
Q Consensus 297 ~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G---~~~P~~v~~li~~l~~~~p~-~~l~vH-~Hnd~GlA~ANaLaAl~a 371 (452)
.+..|.+.+.++++.+.+.|++.|.++-|+| .+++++-.++++.+++...+ ++|-++ .+|+..-++..+..|-++
T Consensus 15 dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~ 94 (297)
T 2rfg_A 15 NGQVDEKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQA 94 (297)
T ss_dssp TTEECHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHHhc
Confidence 3568999999999999999999999999988 67888888889888876543 455554 566778888899999999
Q ss_pred CCCEEeecc
Q 012949 372 GISTVDCSV 380 (452)
Q Consensus 372 Ga~~VD~Sv 380 (452)
||+.+=..-
T Consensus 95 Gadavlv~~ 103 (297)
T 2rfg_A 95 GADAVLCVA 103 (297)
T ss_dssp TCSEEEECC
T ss_pred CCCEEEEcC
Confidence 999776653
No 370
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=83.13 E-value=14 Score=35.55 Aligned_cols=79 Identities=14% Similarity=0.112 Sum_probs=54.4
Q ss_pred CCHHHHHHHHHHHHHCCcC-EEEEc----CCcC---C-CcHHHHHHHHHHHHHhCCCccEEEEeCCCcCc--HHHHHHHH
Q 012949 300 IPPSKVAYVAKELHDMGCF-EISLG----DTIG---V-GTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQ--SLPNILIS 368 (452)
Q Consensus 300 ~d~e~l~~~a~~l~~~Gad-~I~L~----DT~G---~-~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~Gl--A~ANaLaA 368 (452)
.+++.+.+.++.+.++|+| .|.|- -+-| + ..|+.+.++++.+++... .||.+-.--+... ...-+..+
T Consensus 103 ~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~-~Pv~vKi~~~~~~~~~~~~a~~~ 181 (311)
T 1jub_A 103 MSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFT-KPLGVKLPPYFDLVHFDIMAEIL 181 (311)
T ss_dssp SSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCC-SCEEEEECCCCSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhcC-CCEEEEECCCCCHHHHHHHHHHH
Confidence 3678999999999999999 77762 1111 2 288999999999998763 4676655433321 11225566
Q ss_pred HHcCCCEEeec
Q 012949 369 LQMGISTVDCS 379 (452)
Q Consensus 369 l~aGa~~VD~S 379 (452)
.++|++.|.++
T Consensus 182 ~~~G~d~i~v~ 192 (311)
T 1jub_A 182 NQFPLTYVNSV 192 (311)
T ss_dssp TTSCCCEEEEC
T ss_pred HHcCCcEEEec
Confidence 78899988764
No 371
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=83.11 E-value=3.6 Score=38.47 Aligned_cols=73 Identities=21% Similarity=0.259 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEec-chhhhhhhhhhhhhccchhhhhhhh
Q 012949 149 VKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTP-NLKVILQRSILFQQCHASVISSNLW 227 (452)
Q Consensus 149 ~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~-~~~~~i~r~~~~~~~~~~~i~~~~~ 227 (452)
+-.++++.+.+.|++.|-+....... ...-.+. +.++.+++..+ +++++- +.+
T Consensus 36 ~~~~~a~~~~~~G~~~i~v~d~~~~~-~~~~~~~-~~i~~i~~~~~--ipvi~~Ggi~---------------------- 89 (247)
T 3tdn_A 36 LLRDWVVEVEKRGAGEILLTSIDRDG-TKSGYDT-EMIRFVRPLTT--LPIIASGGAG---------------------- 89 (247)
T ss_dssp EHHHHHHHHHHTTCSEEEEEETTTTT-CSSCCCH-HHHHHHGGGCC--SCEEEESCCC----------------------
T ss_pred CHHHHHHHHHHcCCCEEEEEecCccc-CCCcccH-HHHHHHHHhCC--CCEEEeCCCC----------------------
Confidence 45789999999999999886432110 0111233 34455554333 333332 111
Q ss_pred ccHHhHHHHHHcCCCEEEEEe
Q 012949 228 VYLQGFEAAIAAGAKEVAIFA 248 (452)
Q Consensus 228 ~~~~~ie~a~~~Gi~~V~i~~ 248 (452)
..++++.+++.|++.|.+-.
T Consensus 90 -~~~~~~~~l~~Gad~V~ig~ 109 (247)
T 3tdn_A 90 -KMEHFLEAFLRGADKVSINT 109 (247)
T ss_dssp -SHHHHHHHHHTTCSEECCSH
T ss_pred -CHHHHHHHHHcCCCeeehhh
Confidence 23588999999999888753
No 372
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=83.09 E-value=19 Score=35.03 Aligned_cols=101 Identities=10% Similarity=0.073 Sum_probs=62.8
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 310 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~ 310 (452)
+-++..++.|++.|-+.-+..|. .-.|.+|-.+-++.+++.++. .++|.+.+ +..+.+...++++
T Consensus 37 ~lv~~li~~Gv~gl~v~GtTGE~-----~~Ls~eEr~~vi~~~~~~~~g-rvpViaGv---------g~~st~~ai~la~ 101 (306)
T 1o5k_A 37 RLVRYQLENGVNALIVLGTTGES-----PTVNEDEREKLVSRTLEIVDG-KIPVIVGA---------GTNSTEKTLKLVK 101 (306)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTG-----GGCCHHHHHHHHHHHHHHHTT-SSCEEEEC---------CCSCHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEeCccccch-----hhCCHHHHHHHHHHHHHHhCC-CCeEEEcC---------CCccHHHHHHHHH
Confidence 36677788999998887776664 335667766666666655543 34443211 2235567777888
Q ss_pred HHHHCCcCEEEEc-CCcCCCcHHHHHHHHHHHHHhCC
Q 012949 311 ELHDMGCFEISLG-DTIGVGTPGTVVPMLEAVMAVVP 346 (452)
Q Consensus 311 ~l~~~Gad~I~L~-DT~G~~~P~~v~~li~~l~~~~p 346 (452)
.+.++|+|.+-+. =..--.+++.+.+.++.+.+..+
T Consensus 102 ~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~ 138 (306)
T 1o5k_A 102 QAEKLGANGVLVVTPYYNKPTQEGLYQHYKYISERTD 138 (306)
T ss_dssp HHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTTCS
T ss_pred HHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 8888888855443 22333466667777777766543
No 373
>2ash_A Queuine tRNA-ribosyltransferase; TM1561, tRNA-guanine, struc genomics, joint center for structural genomics, JCSG; 1.90A {Thermotoga maritima}
Probab=83.07 E-value=25 Score=35.72 Aligned_cols=126 Identities=18% Similarity=0.175 Sum_probs=81.5
Q ss_pred HHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHH---h-CC---CcEEEEEEeeecCCCCCCCCHHHHHHHH
Q 012949 237 IAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAK---V-LS---IPVRGYVSCVVGCPVEGAIPPSKVAYVA 309 (452)
Q Consensus 237 ~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak---~-~G---~~V~~~l~~~~g~p~~~r~d~e~l~~~a 309 (452)
...|.|.+..++-..+ ...+++++-+.+.+..++++ + +. -.+.+ +..+-..++--.+-+
T Consensus 143 ~~lgsDI~m~lDe~~~------~~~~~~~~~~sv~rT~rWa~r~~~~~~~~~~~lfg--------iVQGg~~~dLR~~sa 208 (381)
T 2ash_A 143 IALGSDICMVFDHCPV------PDADYEEVKEATERTYRWALRSKKAFKTENQALFG--------IVQGGIYPDLRRESA 208 (381)
T ss_dssp HHHTCSEEECCCCCCC--------CCHHHHHHHHHHHHHHHHHHHHHCCCSSCEEEE--------EECCTTCHHHHHHHH
T ss_pred HHhCCCEEEECCcCCC------CCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCcEEE--------EEcCCCCHHHHHHHH
Confidence 3568898877653332 22455555555556555554 2 21 11221 234445666666778
Q ss_pred HHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCC-ccEEEEeCCCcCcH-HHHHHHHHHcCCCEEeeccc
Q 012949 310 KELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPV-EKLAVHLHDTYGQS-LPNILISLQMGISTVDCSVA 381 (452)
Q Consensus 310 ~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~-~~l~vH~Hnd~GlA-~ANaLaAl~aGa~~VD~Sv~ 381 (452)
+.+.+.+.+.+.|.--...-..+.+.+++..+...+|. .|. |. +|.+ ..+.+.++..|+|.+|.+.-
T Consensus 209 ~~l~~~~~~GyaIGGlsvGe~~~~~~~~l~~~~~~LP~~kPR--yL---mGvG~P~~il~~V~~GvDmFDcv~P 277 (381)
T 2ash_A 209 LQLTSIGFDGYAIGGLSIGEERSLTLEMTEVTVEFLPEDKPR--YF---MGGGSPELILELVDRGVDMFDSVFP 277 (381)
T ss_dssp HHHHTTCCSEEEECSCSSSSCHHHHHHHHHHHHTTSCTTSCE--EE---CSCCCHHHHHHHHTTTCCEEEESHH
T ss_pred HHHHhcCCceEEecCcccCCCHHHHHHHHHHHHhhCCCCCcE--EE---cCCCCHHHHHHHHHcCCCEEeCChh
Confidence 99999999999997643333567889999999998885 333 33 3333 46899999999999998764
No 374
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=83.02 E-value=16 Score=35.18 Aligned_cols=98 Identities=11% Similarity=0.059 Sum_probs=66.5
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 310 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~ 310 (452)
+.++..++.|++.|-+.-+..|.+ -.|.+|-.+-++.+++.++ | |.+ | .+..+.+...++++
T Consensus 23 ~lv~~li~~Gv~gl~v~GttGE~~-----~Ls~~Er~~v~~~~~~~~~--g--vi~------G---vg~~~t~~ai~la~ 84 (286)
T 2r91_A 23 NHVKNITSKGVDVVFVAGTTGLGP-----ALSLQEKMELTDAATSAAR--R--VIV------Q---VASLNADEAIALAK 84 (286)
T ss_dssp HHHHHHHHTTCCEEEETSTTTTGG-----GSCHHHHHHHHHHHHHHCS--S--EEE------E---CCCSSHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEECccccChh-----hCCHHHHHHHHHHHHHHhC--C--EEE------e---eCCCCHHHHHHHHH
Confidence 366777889999998887777753 3567766666655555443 2 321 1 12345678888999
Q ss_pred HHHHCCcCEEEEcCCc-CC-CcHHHHHHHHHHHHHhCC
Q 012949 311 ELHDMGCFEISLGDTI-GV-GTPGTVVPMLEAVMAVVP 346 (452)
Q Consensus 311 ~l~~~Gad~I~L~DT~-G~-~~P~~v~~li~~l~~~~p 346 (452)
.+.++|+|.+-+.=.. -- .+++.+.+.++.+.+..+
T Consensus 85 ~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~ 122 (286)
T 2r91_A 85 YAESRGAEAVASLPPYYFPRLSERQIAKYFRDLCSAVS 122 (286)
T ss_dssp HHHHTTCSEEEECCSCSSTTCCHHHHHHHHHHHHHHCS
T ss_pred HHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcC
Confidence 9999999977665333 22 477888888888888754
No 375
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=82.92 E-value=4.9 Score=42.28 Aligned_cols=131 Identities=18% Similarity=0.184 Sum_probs=73.2
Q ss_pred HHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhc-cCCceeEEecchhhhhhhhhhhhhccchhhhhhh
Q 012949 148 GVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDL-EGARLPVLTPNLKVILQRSILFQQCHASVISSNL 226 (452)
Q Consensus 148 ~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~-~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~ 226 (452)
++-.+.++.|.++|++.|++.... +. .....+.++.+++. ++.. +++-+.
T Consensus 255 ~d~~era~aLveaGvd~I~Id~a~-g~----~~~v~~~i~~i~~~~~~~~--vi~g~v---------------------- 305 (511)
T 3usb_A 255 ADAMTRIDALVKASVDAIVLDTAH-GH----SQGVIDKVKEVRAKYPSLN--IIAGNV---------------------- 305 (511)
T ss_dssp TTHHHHHHHHHHTTCSEEEEECSC-TT----SHHHHHHHHHHHHHCTTSE--EEEEEE----------------------
T ss_pred cchHHHHHHHHhhccceEEecccc-cc----hhhhhhHHHHHHHhCCCce--EEeeee----------------------
Confidence 344667889999999999998542 11 11122344444432 3322 222111
Q ss_pred hccHHhHHHHHHcCCCEEEEEecCChHHH---hhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHH
Q 012949 227 WVYLQGFEAAIAAGAKEVAIFASASEAFS---KSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPS 303 (452)
Q Consensus 227 ~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~---~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e 303 (452)
.+.++.+.+.++|+|.|.+-...--.+. ...++.. .+..+.++.+.+++.+++|.+ +.+-.+++
T Consensus 306 -~t~e~a~~~~~aGad~i~vg~g~gsi~~~~~~~g~g~p---~~~~l~~v~~~~~~~~iPVIa---------~GGI~~~~ 372 (511)
T 3usb_A 306 -ATAEATKALIEAGANVVKVGIGPGSICTTRVVAGVGVP---QLTAVYDCATEARKHGIPVIA---------DGGIKYSG 372 (511)
T ss_dssp -CSHHHHHHHHHHTCSEEEECSSCSTTCCHHHHHCCCCC---HHHHHHHHHHHHHTTTCCEEE---------ESCCCSHH
T ss_pred -ccHHHHHHHHHhCCCEEEECCCCccccccccccCCCCC---cHHHHHHHHHHHHhCCCcEEE---------eCCCCCHH
Confidence 1235788899999999987332111110 1112222 234555667778888888752 23445666
Q ss_pred HHHHHHHHHHHCCcCEEEEcC
Q 012949 304 KVAYVAKELHDMGCFEISLGD 324 (452)
Q Consensus 304 ~l~~~a~~l~~~Gad~I~L~D 324 (452)
.+.+. .++||+.+.+.=
T Consensus 373 di~ka----la~GA~~V~vGs 389 (511)
T 3usb_A 373 DMVKA----LAAGAHVVMLGS 389 (511)
T ss_dssp HHHHH----HHTTCSEEEEST
T ss_pred HHHHH----HHhCchhheecH
Confidence 66543 357999888763
No 376
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=82.84 E-value=15 Score=33.73 Aligned_cols=111 Identities=12% Similarity=0.087 Sum_probs=60.5
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCC---HHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIP---PSKVAY 307 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d---~e~l~~ 307 (452)
+.++.+.++|.+.|.+......... .-. ..+.++.+.+++.|+++.. +...+ +... .+ .+.+.+
T Consensus 23 ~~l~~~~~~G~~~vEl~~~~~~~~~--~~~-------~~~~~~~~~~~~~gl~~~~-~~~~~--~~~~-~~~~~~~~~~~ 89 (272)
T 2q02_A 23 AFFRLVKRLEFNKVELRNDMPSGSV--TDD-------LNYNQVRNLAEKYGLEIVT-INAVY--PFNQ-LTEEVVKKTEG 89 (272)
T ss_dssp HHHHHHHHTTCCEEEEETTSTTSST--TTT-------CCHHHHHHHHHHTTCEEEE-EEEET--TTTS-CCHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEeecccccccc--ccc-------cCHHHHHHHHHHcCCeEEe-chhhh--ccCC-cHHHHHHHHHH
Confidence 4678899999999999752210000 000 2233455677888998742 22111 1111 12 245667
Q ss_pred HHHHHHHCCcCEEEEcCCcCCCcH---HHH-HHHHHHHHHhC--CCccEEEEeCC
Q 012949 308 VAKELHDMGCFEISLGDTIGVGTP---GTV-VPMLEAVMAVV--PVEKLAVHLHD 356 (452)
Q Consensus 308 ~a~~l~~~Gad~I~L~DT~G~~~P---~~v-~~li~~l~~~~--p~~~l~vH~Hn 356 (452)
.++.+.++|++.|.+. .|...+ ..+ .+.++.+.+.. -++.|.+|.|+
T Consensus 90 ~i~~a~~lG~~~v~~~--~g~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~~E~~~ 142 (272)
T 2q02_A 90 LLRDAQGVGARALVLC--PLNDGTIVPPEVTVEAIKRLSDLFARYDIQGLVEPLG 142 (272)
T ss_dssp HHHHHHHHTCSEEEEC--CCCSSBCCCHHHHHHHHHHHHHHHHTTTCEEEECCCC
T ss_pred HHHHHHHhCCCEEEEc--cCCCchhHHHHHHHHHHHHHHHHHHHcCCEEEEEecC
Confidence 7788888899988873 222211 233 34444443322 24578888886
No 377
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=82.82 E-value=9.6 Score=37.47 Aligned_cols=182 Identities=15% Similarity=0.095 Sum_probs=101.6
Q ss_pred CHHHHHHHHHHHHHC----CCCEEEEecCCC-CCcccc-cC--CHHHHHHHHHhcc-CCceeEEecchhhhhhhhhhhhh
Q 012949 146 PTGVKVELIRRLVSS----GLPVVEATSFVS-PKWVPQ-LA--DARDVMEAVRDLE-GARLPVLTPNLKVILQRSILFQQ 216 (452)
Q Consensus 146 ~~~~k~~i~~~L~~~----Gv~~IEvG~~~s-~~~~p~-~~--D~e~v~~~i~~~~-~~~l~~l~~~~~~~i~r~~~~~~ 216 (452)
+.++..++++.|.++ |+..+=-++|-- |+=.|. +. .-++=++.+++.. ...+++++--.
T Consensus 53 s~e~~~~~A~~lk~~~~~~~~~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L~~~~~e~GLpv~Tev~------------ 120 (298)
T 3fs2_A 53 TRDHAFEMAGRLKEMTDKLGIGLVYKSSFDKANRTSLKAARGIGLEKALEVFSDLKKEYGFPVLTDIH------------ 120 (298)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCEEEECBCCCCC---------CCHHHHHHHHHHHHHHHCCCEEEECC------------
T ss_pred CHHHHHHHHHHHHHHHHHcCCcEEEEcccccCCCCCCCCcCCcCHHHHHHHHHHHHHhcCCeEEEEeC------------
Confidence 788999999999876 566555444321 211110 00 1123334444321 22333333111
Q ss_pred ccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCC
Q 012949 217 CHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPV 296 (452)
Q Consensus 217 ~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~ 296 (452)
..+.++.+.+. ++.+.|... +.. | . ++++++-+.|.+|- ++.
T Consensus 121 ------------D~~~v~~l~~~-vd~lkIgA~--~~~---n--------~----~LLr~va~~gkPVi--lK~------ 162 (298)
T 3fs2_A 121 ------------TEEQCAAVAPV-VDVLQIPAF--LCR---Q--------T----DLLIAAARTGRVVN--VKK------ 162 (298)
T ss_dssp ------------SHHHHHHHTTT-CSEEEECGG--GTT---C--------H----HHHHHHHHTTSEEE--EEC------
T ss_pred ------------CHHHHHHHHhh-CCEEEECcc--ccC---C--------H----HHHHHHHccCCcEE--EeC------
Confidence 12366666666 888877542 110 0 1 23445556788876 332
Q ss_pred CCC-CCHHHHHHHHHHHHHCCcCEEEEcCCcCCC-cHH---HHHHHHHHHHHhCCCccEEE-EeCC-------------C
Q 012949 297 EGA-IPPSKVAYVAKELHDMGCFEISLGDTIGVG-TPG---TVVPMLEAVMAVVPVEKLAV-HLHD-------------T 357 (452)
Q Consensus 297 ~~r-~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~-~P~---~v~~li~~l~~~~p~~~l~v-H~Hn-------------d 357 (452)
+. .+++++...++.+.+.|.+.|.|+.-.-.. .+. .++ .|..+++ + ..+|.+ ..|- .
T Consensus 163 -Gms~t~~ei~~ave~i~~~Gn~~iiL~erg~~y~~~~~~vdl~-~i~~lk~-~-~~PV~~D~sHsvq~p~~~~~~s~G~ 238 (298)
T 3fs2_A 163 -GQFLAPWDMKNVLAKITESGNPNVLATERGVSFGYNTLVSDMR-ALPIMAG-L-GAPVIFDATHSVQQPGGQGGSTGGQ 238 (298)
T ss_dssp -CTTCCGGGHHHHHHHHHTTTCCCEEEEECCEECSSSCEECCTT-HHHHHHT-T-TSCEEEEHHHHTCCCC--------C
T ss_pred -CCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccCHH-HHHHHHH-c-CCcEEEcCCCccccCCcccCCCCCc
Confidence 23 478888889999999998878777633211 111 122 2555676 6 457888 6664 2
Q ss_pred cCcHHHHHHHHHHcCCC--EEeeccc
Q 012949 358 YGQSLPNILISLQMGIS--TVDCSVA 381 (452)
Q Consensus 358 ~GlA~ANaLaAl~aGa~--~VD~Sv~ 381 (452)
+.+...-+++|+.+||+ .|+.=..
T Consensus 239 r~~v~~~a~AAvAlGAdGl~IE~H~t 264 (298)
T 3fs2_A 239 REFVETLARAAVAVGVAGFFIETHED 264 (298)
T ss_dssp GGGHHHHHHHHHHHCCSEEEEEEESS
T ss_pred hhhHHHHHHHHHHcCCCEEEEEecCC
Confidence 23447789999999999 7765443
No 378
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=82.71 E-value=3.6 Score=38.70 Aligned_cols=68 Identities=13% Similarity=0.084 Sum_probs=53.4
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEE
Q 012949 300 IPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTV 376 (452)
Q Consensus 300 ~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~V 376 (452)
.+++...++++.+.+.|++.|.+.=+ +| ...+.|+.+++++|+..|+.-.=- -...+..|+++||+.|
T Consensus 22 ~~~~~a~~~a~al~~gGi~~iEvt~~----t~-~a~~~I~~l~~~~p~~~IGAGTVl----t~~~a~~ai~AGA~fi 89 (217)
T 3lab_A 22 DDLVHAIPMAKALVAGGVHLLEVTLR----TE-AGLAAISAIKKAVPEAIVGAGTVC----TADDFQKAIDAGAQFI 89 (217)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEEEETT----ST-THHHHHHHHHHHCTTSEEEEECCC----SHHHHHHHHHHTCSEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCC----Cc-cHHHHHHHHHHHCCCCeEeecccc----CHHHHHHHHHcCCCEE
Confidence 46789999999999999999998432 34 344678889999998767775333 3678889999999977
No 379
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=82.68 E-value=32 Score=32.36 Aligned_cols=167 Identities=14% Similarity=0.054 Sum_probs=91.8
Q ss_pred HHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEe-cchhhhhhhhhhhhhccchhhhhhhhccH
Q 012949 152 ELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLT-PNLKVILQRSILFQQCHASVISSNLWVYL 230 (452)
Q Consensus 152 ~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~-~~~~~~i~r~~~~~~~~~~~i~~~~~~~~ 230 (452)
+.++.+.++|.|.|++|.-.. -..+.+.+.++++....++++. |...
T Consensus 22 ~~~~~~~~~GtD~i~vGGs~g-------vt~~~~~~~v~~ik~~~~Pvvlfp~~~------------------------- 69 (228)
T 3vzx_A 22 EQLEILCESGTDAVIIGGSDG-------VTEDNVLRMMSKVRRFLVPCVLEVSAI------------------------- 69 (228)
T ss_dssp THHHHHHTSSCSEEEECCCSC-------CCHHHHHHHHHHHTTSSSCEEEECSCG-------------------------
T ss_pred HHHHHHHHcCCCEEEECCcCC-------CCHHHHHHHHHHhhccCCCEEEeCCCH-------------------------
Confidence 345567899999999996321 1234556666655445555433 4321
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCC-----cE--EEEEEeeecCCCCC-----
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSI-----PV--RGYVSCVVGCPVEG----- 298 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~-----~V--~~~l~~~~g~p~~~----- 298 (452)
+. +..|+|-+-+..=.|.- +.+..+. ..++.+|+.|+ ++ .+|+... |...
T Consensus 70 ~~----v~~gaD~~l~pslln~~--------~~~~i~g---~~~~a~~~~g~~~~~~e~i~~gYivv~---p~s~~~~~~ 131 (228)
T 3vzx_A 70 EA----IVPGFDLYFIPSVLNSK--------NADWIVG---MHQKAMKEYGELMSMEEIVAEGYCIAN---PDCKAAALT 131 (228)
T ss_dssp GG----CCSCCSEEEEEEETTBS--------SGGGTTH---HHHHHHHHHHHHHHHSCEEEEEEEECC---SSSHHHHHT
T ss_pred HH----ccccCCEEEEeeecCCC--------Ccchhhh---HHHHHHHHcCCCCcccceeeeEEEEEC---CCCcceeee
Confidence 01 13588877665322210 0111111 22234567775 54 5666643 3321
Q ss_pred ----CCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCC
Q 012949 299 ----AIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGIS 374 (452)
Q Consensus 299 ----r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~ 374 (452)
-.+++.+..++..+.-+|.+.|++-= .|.-. -.++|+.+++..+..++.+=+ |.-.......+.+||+
T Consensus 132 ~a~~~~~~e~~~~~a~~a~~~g~~~VYld~-sG~~~---~~~~i~~i~~~~~~~Pv~vGG----GI~t~e~a~~~~~gAD 203 (228)
T 3vzx_A 132 EADADLNMDDIVAYARVSELLQLPIFYLEY-SGVLG---DIEAVKKTKAVLETSTLFYGG----GIKDAETAKQYAEHAD 203 (228)
T ss_dssp TBCCCCCHHHHHHHHHHHHHTTCSEEEEEC-TTSCC---CHHHHHHHHHHCSSSEEEEES----SCCSHHHHHHHHTTCS
T ss_pred cccCCCCHHHHHHHHHHHHHcCCCEEEecC-CCCcC---CHHHHHHHHHhcCCCCEEEeC----CCCCHHHHHHHHhCCC
Confidence 12568888888888888999998844 66533 367788888876333444422 2222333333347988
Q ss_pred EE
Q 012949 375 TV 376 (452)
Q Consensus 375 ~V 376 (452)
.|
T Consensus 204 ~V 205 (228)
T 3vzx_A 204 VI 205 (228)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 380
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=82.66 E-value=4.1 Score=37.66 Aligned_cols=116 Identities=9% Similarity=-0.064 Sum_probs=64.3
Q ss_pred HhHHHHHHcCCCEEEEE-ecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEE-EEEeeecCCCCC--CCCHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIF-ASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRG-YVSCVVGCPVEG--AIPPSKVA 306 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~-~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~-~l~~~~g~p~~~--r~d~e~l~ 306 (452)
+.++.+.+.|.+.|.+. .. ..+.. ... ..+.++.+.+++.|+++.. .....++.++.. ....+.+.
T Consensus 18 ~~l~~~~~~G~~~vEl~~~~--~~~~~-~~~-------~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (278)
T 1i60_A 18 LDLELCEKHGYDYIEIRTMD--KLPEY-LKD-------HSLDDLAEYFQTHHIKPLALNALVFFNNRDEKGHNEIITEFK 87 (278)
T ss_dssp HHHHHHHHTTCSEEEEETTT--HHHHH-TTS-------SCHHHHHHHHHTSSCEEEEEEEEECCSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEccHH--HHHHH-hcc-------CCHHHHHHHHHHcCCCeeeeccccccccCCHHHHHHHHHHHH
Confidence 46788999999999998 43 11100 000 1234556778899998752 221111111100 01134667
Q ss_pred HHHHHHHHCCcCEEEEcCCcCCC----c-HHHHHHHHHHHHH---hC--CCccEEEEeCCCc
Q 012949 307 YVAKELHDMGCFEISLGDTIGVG----T-PGTVVPMLEAVMA---VV--PVEKLAVHLHDTY 358 (452)
Q Consensus 307 ~~a~~l~~~Gad~I~L~DT~G~~----~-P~~v~~li~~l~~---~~--p~~~l~vH~Hnd~ 358 (452)
+.++.+.++|++.|.+. .|.. . ......+++.+++ .. -++.|.+|.|+..
T Consensus 88 ~~i~~a~~lG~~~v~~~--~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~~ 147 (278)
T 1i60_A 88 GMMETCKTLGVKYVVAV--PLVTEQKIVKEEIKKSSVDVLTELSDIAEPYGVKIALEFVGHP 147 (278)
T ss_dssp HHHHHHHHHTCCEEEEE--CCBCSSCCCHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCT
T ss_pred HHHHHHHHcCCCEEEEe--cCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCEEEEEecCCc
Confidence 78888888999988873 2221 2 3333444444332 22 2468999999875
No 381
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=82.66 E-value=19 Score=33.37 Aligned_cols=89 Identities=18% Similarity=0.134 Sum_probs=53.5
Q ss_pred eecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCcCC---CcHHHHHHHHHHHHHhCCCccEEE--EeC-CCcCcHHHH
Q 012949 291 VVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGV---GTPGTVVPMLEAVMAVVPVEKLAV--HLH-DTYGQSLPN 364 (452)
Q Consensus 291 ~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~li~~l~~~~p~~~l~v--H~H-nd~GlA~AN 364 (452)
+.+.|.... ..+.....++.+.+.|++.|-+.=-.|. ..+..+.+.++.+++..+.+.+-+ ..- -|......-
T Consensus 59 v~~~P~g~~-~~~~k~~~~~~A~~~Gad~Id~viN~g~~~~~~~~~~~~~i~~v~~a~~pv~vKvi~e~~~l~~~~~~~~ 137 (225)
T 1mzh_A 59 VIGFPLGLN-KTSVKVKEAVEAVRDGAQELDIVWNLSAFKSEKYDFVVEELKEIFRETPSAVHKVIVETPYLNEEEIKKA 137 (225)
T ss_dssp EESTTTCCS-CHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHTCTTSEEEEECCGGGCCHHHHHHH
T ss_pred EecCCCCcc-chhhhHHHHHHHHHcCCCEEEEEecHHHHhcCChHHHHHHHHHHHHHhcCceEEEEEeCCCCCHHHHHHH
Confidence 345566533 3343344567788899999985323333 356778888999998875222222 111 011123455
Q ss_pred HHHHHHcCCCEEeecc
Q 012949 365 ILISLQMGISTVDCSV 380 (452)
Q Consensus 365 aLaAl~aGa~~VD~Sv 380 (452)
+..+.++|||.|.++-
T Consensus 138 a~~a~eaGad~I~tst 153 (225)
T 1mzh_A 138 VEICIEAGADFIKTST 153 (225)
T ss_dssp HHHHHHHTCSEEECCC
T ss_pred HHHHHHhCCCEEEECC
Confidence 7778899999996655
No 382
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=82.64 E-value=2.7 Score=42.03 Aligned_cols=70 Identities=14% Similarity=0.038 Sum_probs=45.6
Q ss_pred HHHHHHHHHHCCcCEEEEcCCc-CCCcHHHH--------HHHHHHHH-HhCC----CccEEEEeCCCcCcHHHHHHHHHH
Q 012949 305 VAYVAKELHDMGCFEISLGDTI-GVGTPGTV--------VPMLEAVM-AVVP----VEKLAVHLHDTYGQSLPNILISLQ 370 (452)
Q Consensus 305 l~~~a~~l~~~Gad~I~L~DT~-G~~~P~~v--------~~li~~l~-~~~p----~~~l~vH~Hnd~GlA~ANaLaAl~ 370 (452)
+.++++...++|++.|.+.|+. |.++|... .++++.++ +..| .+++-+|+.++ +.-+. .-.+
T Consensus 199 ~~~~~~~~i~aGad~i~i~D~~~~~lsp~~f~ef~~p~~k~i~~~i~~~~~~~g~~~~p~i~~~~G~-~~~l~---~l~~ 274 (367)
T 1r3s_A 199 LVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGLAPVPMIIFAKDG-HFALE---ELAQ 274 (367)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHHHHHTTCCCCCEEEEETTC-GGGHH---HHTT
T ss_pred HHHHHHHHHHhCCCEEEEecCccccCCHHHHHHHhHHHHHHHHHHHhhhhccccCCCCCeEEEcCCc-HHHHH---HHHh
Confidence 4456667778999999998854 56677664 44466666 5433 46788888776 33322 2236
Q ss_pred cCCCEEee
Q 012949 371 MGISTVDC 378 (452)
Q Consensus 371 aGa~~VD~ 378 (452)
.|++.++.
T Consensus 275 ~g~d~i~~ 282 (367)
T 1r3s_A 275 AGYEVVGL 282 (367)
T ss_dssp SSCSEEEC
T ss_pred cCCCEEEe
Confidence 89987764
No 383
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=82.62 E-value=15 Score=35.92 Aligned_cols=99 Identities=13% Similarity=0.079 Sum_probs=58.5
Q ss_pred hHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHHH
Q 012949 232 GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKE 311 (452)
Q Consensus 232 ~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~ 311 (452)
-++..++.|++.|-+.-+..|. .-.|.+|-.+-++.+++.++. .++|.+.+ +. +.+...++++.
T Consensus 38 lv~~li~~Gv~gl~v~GtTGE~-----~~Ls~eEr~~vi~~~~~~~~g-rvpViaGv---------g~-st~~ai~la~~ 101 (314)
T 3d0c_A 38 NVEFLLQNGIEVIVPNGNTGEF-----YALTIEEAKQVATRVTELVNG-RATVVAGI---------GY-SVDTAIELGKS 101 (314)
T ss_dssp HHHHHHHTTCSEECTTSGGGTG-----GGSCHHHHHHHHHHHHHHHTT-SSEEEEEE---------CS-SHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECcccCCh-----hhCCHHHHHHHHHHHHHHhCC-CCeEEecC---------Cc-CHHHHHHHHHH
Confidence 5666777888887766555554 234666666655555555432 24443211 22 45667777777
Q ss_pred HHHCCcCEEEEcC-CcCCCcHHHHHHHHHHHHHhCC
Q 012949 312 LHDMGCFEISLGD-TIGVGTPGTVVPMLEAVMAVVP 346 (452)
Q Consensus 312 l~~~Gad~I~L~D-T~G~~~P~~v~~li~~l~~~~p 346 (452)
+.++|+|.+-+.= ..--.+++.+++.++.+.+..+
T Consensus 102 A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~ 137 (314)
T 3d0c_A 102 AIDSGADCVMIHQPVHPYITDAGAVEYYRNIIEALD 137 (314)
T ss_dssp HHHTTCSEEEECCCCCSCCCHHHHHHHHHHHHHHSS
T ss_pred HHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 7777877655532 2223456667777777776654
No 384
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=82.56 E-value=3.9 Score=40.40 Aligned_cols=70 Identities=13% Similarity=0.187 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHCCcCEEEEcCCcCC---CcHHHHHHHH----HHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEE
Q 012949 304 KVAYVAKELHDMGCFEISLGDTIGV---GTPGTVVPML----EAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTV 376 (452)
Q Consensus 304 ~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~li----~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~V 376 (452)
.+.++++...++|++.|.+.|+.|. ++|....+++ +.+.+.+... .-+|+.-+.+.- .-.-.+.|++.+
T Consensus 191 ~~~~~~~~qi~aGad~i~i~D~~a~~~~lsp~~f~~f~~p~~k~i~~~~~~~-~iih~~g~~~~~---l~~~~~~g~d~i 266 (348)
T 4ay7_A 191 ASIIYANAMVEAGADVIAIADPVASPDLMSPDSFRQFLKSRLQKFASSVNSV-TVLHICGNVNPI---LSDMADCGFEGL 266 (348)
T ss_dssp HHHHHHHHHHHHTCSEEEEECGGGSTTTSCHHHHHHHHHHHHHHHHHHSSSE-EEEECCSCCHHH---HHHHHTSCCSEE
T ss_pred HHHHHHHHHHhcCCCcceeeccccccccCCHHHHHHHhhHHHHHHHhhccCC-cEEEecCCcHHH---HHHHHHhccccc
Confidence 3445667777899999999999875 8998877764 4444555653 346777543222 122236899876
Q ss_pred e
Q 012949 377 D 377 (452)
Q Consensus 377 D 377 (452)
+
T Consensus 267 ~ 267 (348)
T 4ay7_A 267 S 267 (348)
T ss_dssp E
T ss_pred c
Confidence 4
No 385
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=82.56 E-value=22 Score=34.36 Aligned_cols=161 Identities=14% Similarity=0.121 Sum_probs=91.3
Q ss_pred HHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEecchhhhhhhhhhhhhccchhhhhhhhc
Q 012949 149 VKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLWV 228 (452)
Q Consensus 149 ~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~~ 228 (452)
+-.++++...+.|...|-+-- -+.|.. ... +.+..+++.. .++++.-. |..
T Consensus 80 dp~~~A~~y~~~GA~~IsVlt--d~~~f~--Gs~-~~L~~ir~~v--~lPVl~Kd----------fi~------------ 130 (272)
T 3tsm_A 80 DPPALAKAYEEGGAACLSVLT--DTPSFQ--GAP-EFLTAARQAC--SLPALRKD----------FLF------------ 130 (272)
T ss_dssp CHHHHHHHHHHTTCSEEEEEC--CSTTTC--CCH-HHHHHHHHTS--SSCEEEES----------CCC------------
T ss_pred CHHHHHHHHHHCCCCEEEEec--cccccC--CCH-HHHHHHHHhc--CCCEEECC----------ccC------------
Confidence 447799999999999998731 111111 122 3455565432 34444211 111
Q ss_pred cHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHH
Q 012949 229 YLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYV 308 (452)
Q Consensus 229 ~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~ 308 (452)
....+..|.++|+|.|.+....=+ -+.+.+++++++++|+.+-+.+ + +.+.
T Consensus 131 d~~qi~ea~~~GAD~VlLi~a~L~--------------~~~l~~l~~~a~~lGl~~lvev--------h---~~eE---- 181 (272)
T 3tsm_A 131 DPYQVYEARSWGADCILIIMASVD--------------DDLAKELEDTAFALGMDALIEV--------H---DEAE---- 181 (272)
T ss_dssp STHHHHHHHHTTCSEEEEETTTSC--------------HHHHHHHHHHHHHTTCEEEEEE--------C---SHHH----
T ss_pred CHHHHHHHHHcCCCEEEEcccccC--------------HHHHHHHHHHHHHcCCeEEEEe--------C---CHHH----
Confidence 112578899999999998865322 1456788899999999876322 1 2333
Q ss_pred HHHHHHCCcCEEEEcC----CcCCCcHHHHHHHHHHHHHhCCC-ccEEEEeCCCcCc-HHHHHHHHHHcCCCEE
Q 012949 309 AKELHDMGCFEISLGD----TIGVGTPGTVVPMLEAVMAVVPV-EKLAVHLHDTYGQ-SLPNILISLQMGISTV 376 (452)
Q Consensus 309 a~~l~~~Gad~I~L~D----T~G~~~P~~v~~li~~l~~~~p~-~~l~vH~Hnd~Gl-A~ANaLaAl~aGa~~V 376 (452)
++.+.++|++.|.+.- |.++ .+..+.+++ +.+|. .++-.= -|. .......+.++||+.|
T Consensus 182 l~~A~~~ga~iIGinnr~l~t~~~-dl~~~~~L~----~~ip~~~~vIae----sGI~t~edv~~l~~~Ga~gv 246 (272)
T 3tsm_A 182 MERALKLSSRLLGVNNRNLRSFEV-NLAVSERLA----KMAPSDRLLVGE----SGIFTHEDCLRLEKSGIGTF 246 (272)
T ss_dssp HHHHTTSCCSEEEEECBCTTTCCB-CTHHHHHHH----HHSCTTSEEEEE----SSCCSHHHHHHHHTTTCCEE
T ss_pred HHHHHhcCCCEEEECCCCCccCCC-ChHHHHHHH----HhCCCCCcEEEE----CCCCCHHHHHHHHHcCCCEE
Confidence 3455688999888763 2222 234444443 44542 222211 222 2356666778898854
No 386
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=82.55 E-value=13 Score=35.53 Aligned_cols=173 Identities=13% Similarity=0.027 Sum_probs=0.0
Q ss_pred HHHHHHHHHCCCCEEEEecCCCCCccc------ccCCHHHHHHHHHhccCCceeEEecch--------------------
Q 012949 151 VELIRRLVSSGLPVVEATSFVSPKWVP------QLADARDVMEAVRDLEGARLPVLTPNL-------------------- 204 (452)
Q Consensus 151 ~~i~~~L~~~Gv~~IEvG~~~s~~~~p------~~~D~e~v~~~i~~~~~~~l~~l~~~~-------------------- 204 (452)
.+.++.+.++|++.||+... +..++ .-.+.+++.+.+++ .++++.++....
T Consensus 18 ~~~l~~~~~~G~~~vEl~~~--~~~~~~~~~~~~~~~~~~~~~~l~~-~gl~i~~~~~~~~g~~~~~p~~~~~~~~~~~~ 94 (340)
T 2zds_A 18 EEVCRLARDFGYDGLELACW--GDHFEVDKALADPSYVDSRHQLLDK-YGLKCWAISNHLVGQAVCDAIIDERHEAILPA 94 (340)
T ss_dssp HHHHHHHHHHTCSEEEEESS--TTTCCHHHHHHCTTHHHHHHHHHHH-TTCEEEEEEEHHHHHHHHCSCCSHHHHHHSCH
T ss_pred HHHHHHHHHcCCCEEEeccc--cccCCccccccCHHHHHHHHHHHHH-cCCeEEEeeccccccccccccccccccccccc
Q ss_pred --------hhhhhhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCC------------hHHHhhhcCCCHH
Q 012949 205 --------KVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASAS------------EAFSKSNINCSIE 264 (452)
Q Consensus 205 --------~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~S------------d~~~~~~~~~s~e 264 (452)
...-++.+.+-.. .++.|.+.|++.|.+..... +...+..+ +
T Consensus 95 ~l~~~~~~~~~r~~~~~~~~~--------------~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~----~ 156 (340)
T 2zds_A 95 RIWGDGDAEGVRQRAAAEIKD--------------TARAAARLGVDTVIGFTGSAIWHLVAMFPPAPESMIERGY----Q 156 (340)
T ss_dssp HHHTTCCHHHHHHHHHHHHHH--------------HHHHHHHHTCSEEEECCCCSSGGGTTCCSCCCHHHHHHHH----H
T ss_pred cccccCCHHHHHHHHHHHHHH--------------HHHHHHHcCCCEEEEecCCcCcccccccCCCcccchHHHH----H
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHHHHHHCC--cCEEEEcCCcCCCcHH-HHHHHHHHH
Q 012949 265 DSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMG--CFEISLGDTIGVGTPG-TVVPMLEAV 341 (452)
Q Consensus 265 ~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~G--ad~I~L~DT~G~~~P~-~v~~li~~l 341 (452)
...+.+.++.++|++.|+++. -+............+.+.+.+.+ ...=..-|+.=...-. ...+.++.+
T Consensus 157 ~~~~~l~~l~~~a~~~Gv~l~--------lEn~~~~~~~~~~~~~~ll~~v~~~~~vg~~~D~~H~~~~g~d~~~~l~~~ 228 (340)
T 2zds_A 157 DFADRWNPILDVFDAEGVRFA--------HEVHPSEIAYDYWTTHRALEAVGHRPAFGLNFDPSHFVWQDLDPVGFLWDF 228 (340)
T ss_dssp HHHHHHHHHHHHHHHHTCEEE--------EECCTTSSCCSHHHHHHHHHHTTTCTTEEEEECCHHHHHTTCCHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCEEE--------EEcCCCcccCCHHHHHHHHHhcCCCCCeeEEEchhhHHHhCCCHHHHHHHH
Q ss_pred HHhCCCccEEEEeCC
Q 012949 342 MAVVPVEKLAVHLHD 356 (452)
Q Consensus 342 ~~~~p~~~l~vH~Hn 356 (452)
...+.. +|+||
T Consensus 229 ~~~i~~----vHl~D 239 (340)
T 2zds_A 229 RDRIYH----VDCKE 239 (340)
T ss_dssp GGGEEE----EEECE
T ss_pred HhhEEE----EEecc
No 387
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=82.55 E-value=2.8 Score=37.89 Aligned_cols=74 Identities=15% Similarity=0.097 Sum_probs=48.7
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEE--EeCCCcCcHHHHHHHHHHcCCCEEe
Q 012949 300 IPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAV--HLHDTYGQSLPNILISLQMGISTVD 377 (452)
Q Consensus 300 ~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~v--H~Hnd~GlA~ANaLaAl~aGa~~VD 377 (452)
.+.+...++++.+.+ |++.|-+.|.. ..+ .-.++|+.+++.+|+.++.+ -.|| . .---.-.|.++||+.|.
T Consensus 10 ~~~~~~~~~~~~~~~-~v~~iev~~~~--~~~-~g~~~i~~l~~~~~~~~i~~~l~~~d-i--~~~~~~~a~~~Gad~v~ 82 (207)
T 3ajx_A 10 LSTEAALELAGKVAE-YVDIIELGTPL--IKA-EGLSVITAVKKAHPDKIVFADMKTMD-A--GELEADIAFKAGADLVT 82 (207)
T ss_dssp SCHHHHHHHHHHHGG-GCSEEEECHHH--HHH-HCTHHHHHHHHHSTTSEEEEEEEECS-C--HHHHHHHHHHTTCSEEE
T ss_pred CCHHHHHHHHHHhhc-cCCEEEECcHH--HHh-hCHHHHHHHHHhCCCCeEEEEEEecC-c--cHHHHHHHHhCCCCEEE
Confidence 467888889998888 88998886532 122 12356888888886655554 4554 1 11113568899999886
Q ss_pred ecc
Q 012949 378 CSV 380 (452)
Q Consensus 378 ~Sv 380 (452)
...
T Consensus 83 vh~ 85 (207)
T 3ajx_A 83 VLG 85 (207)
T ss_dssp EET
T ss_pred Eec
Confidence 544
No 388
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=82.47 E-value=15 Score=36.55 Aligned_cols=111 Identities=13% Similarity=0.087 Sum_probs=69.1
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 310 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~ 310 (452)
+.++.+.+.|++.|.+.....+ .+.++.+|+.|+.|...+ .+++ .++
T Consensus 113 ~~~~~~~~~g~~~V~~~~g~~~------------------~~~i~~~~~~g~~v~~~v-----------~t~~----~a~ 159 (369)
T 3bw2_A 113 AKLAVLLDDPVPVVSFHFGVPD------------------REVIARLRRAGTLTLVTA-----------TTPE----EAR 159 (369)
T ss_dssp HHHHHHHHSCCSEEEEESSCCC------------------HHHHHHHHHTTCEEEEEE-----------SSHH----HHH
T ss_pred HHHHHHHhcCCCEEEEeCCCCc------------------HHHHHHHHHCCCeEEEEC-----------CCHH----HHH
Confidence 4678889999999988654221 134455667788765322 1233 356
Q ss_pred HHHHCCcCEEEEcCC-----cCCCcH--------HHHHHHHHHHHHhCCCccEEEEeCCCcCc-HHHHHHHHHHcCCCEE
Q 012949 311 ELHDMGCFEISLGDT-----IGVGTP--------GTVVPMLEAVMAVVPVEKLAVHLHDTYGQ-SLPNILISLQMGISTV 376 (452)
Q Consensus 311 ~l~~~Gad~I~L~DT-----~G~~~P--------~~v~~li~~l~~~~p~~~l~vH~Hnd~Gl-A~ANaLaAl~aGa~~V 376 (452)
.+.++|+|.|.+--. .|...| ....++++.+++.+. ++|..= =|. -..|+.+++.+||+.|
T Consensus 160 ~a~~~GaD~i~v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~~-iPViaa----GGI~~~~~~~~~l~~GAd~V 234 (369)
T 3bw2_A 160 AVEAAGADAVIAQGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAVD-IPVVAA----GGIMRGGQIAAVLAAGADAA 234 (369)
T ss_dssp HHHHTTCSEEEEECTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHCS-SCEEEE----SSCCSHHHHHHHHHTTCSEE
T ss_pred HHHHcCCCEEEEeCCCcCCcCCCcccccccccccccHHHHHHHHHHhcC-ceEEEE----CCCCCHHHHHHHHHcCCCEE
Confidence 678899999988221 232211 223567778877653 344332 345 4578888999999988
Q ss_pred eec
Q 012949 377 DCS 379 (452)
Q Consensus 377 D~S 379 (452)
...
T Consensus 235 ~vG 237 (369)
T 3bw2_A 235 QLG 237 (369)
T ss_dssp EES
T ss_pred EEC
Confidence 764
No 389
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=82.39 E-value=25 Score=34.33 Aligned_cols=76 Identities=9% Similarity=-0.057 Sum_probs=47.1
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEEcCCcC----------------CCc---HHHHHHHHHHHHHhCC-CccEEEEeCCCcC
Q 012949 300 IPPSKVAYVAKELHDMGCFEISLGDTIG----------------VGT---PGTVVPMLEAVMAVVP-VEKLAVHLHDTYG 359 (452)
Q Consensus 300 ~d~e~l~~~a~~l~~~Gad~I~L~DT~G----------------~~~---P~~v~~li~~l~~~~p-~~~l~vH~Hnd~G 359 (452)
.+.+.+.++++.+.++|+|.|.+..+.. +.- .....++++.+++.++ .++|-.=.-=..
T Consensus 222 ~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~- 300 (336)
T 1f76_A 222 LSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDS- 300 (336)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEESSCCS-
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEECCCCC-
Confidence 4567889999999999999999987631 111 1123366777777664 344433221111
Q ss_pred cHHHHHHHHHHcCCCEEee
Q 012949 360 QSLPNILISLQMGISTVDC 378 (452)
Q Consensus 360 lA~ANaLaAl~aGa~~VD~ 378 (452)
-..+..++++||+.|-.
T Consensus 301 --~~da~~~l~~GAd~V~i 317 (336)
T 1f76_A 301 --VIAAREKIAAGASLVQI 317 (336)
T ss_dssp --HHHHHHHHHHTCSEEEE
T ss_pred --HHHHHHHHHCCCCEEEe
Confidence 24566677789887743
No 390
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=82.35 E-value=10 Score=35.97 Aligned_cols=115 Identities=10% Similarity=0.019 Sum_probs=66.3
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecC---CCCC-CCCHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGC---PVEG-AIPPSKVA 306 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~---p~~~-r~d~e~l~ 306 (452)
+.++.+.++|.+.|.++.. +........ ..+.++.+.+++.|+++.. +.. ++. ++.. +...+.+.
T Consensus 40 ~~l~~a~~~G~~~vEl~~~--~~~~~~~~~-------~~~~~~~~~l~~~gl~i~~-~~~-~~~~~~~~~~~~~~~~~~~ 108 (296)
T 2g0w_A 40 KRVKVAAENGFDGIGLRAE--NYVDALAAG-------LTDEDMLRILDEHNMKVTE-VEY-ITQWGTAEDRTAEQQKKEQ 108 (296)
T ss_dssp HHHHHHHHTTCSEEEEEHH--HHHHHHHTT-------CCHHHHHHHHHHTTCEEEE-EEC-BCCCSSTTTCCHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEeCHH--HHHHHHhcC-------CcHHHHHHHHHHcCCceEe-ehh-hhccccCChHHHHHHHHHH
Confidence 4788999999999999853 110000001 1234556778889998753 221 211 1110 00134667
Q ss_pred HHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCC
Q 012949 307 YVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDT 357 (452)
Q Consensus 307 ~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd 357 (452)
+.++.+.++|++.|.+.-. +......+.+.++.+.+...++.|.+|.|+.
T Consensus 109 ~~i~~A~~lGa~~v~~g~~-~~~~~~~~~~~l~~l~~~a~Gv~l~lE~~~~ 158 (296)
T 2g0w_A 109 TTFHMARLFGVKHINCGLL-EKIPEEQIIVALGELCDRAEELIIGLEFMPY 158 (296)
T ss_dssp HHHHHHHHHTCCEEEECCC-SCCCHHHHHHHHHHHHHHHTTSEEEEECCTT
T ss_pred HHHHHHHHcCCCEEEEcCC-CCCCHHHHHHHHHHHHHHhcCCEEEEEecCC
Confidence 7888888899999887321 2223345555555555443457899998864
No 391
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=82.34 E-value=29 Score=32.38 Aligned_cols=120 Identities=13% Similarity=0.070 Sum_probs=67.6
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeee--cCCCCCCCC-------
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVV--GCPVEGAIP------- 301 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~--g~p~~~r~d------- 301 (452)
+.++.+.+.|.+.|.+.......+.. ....+. +.+.++.+.+++.|+++.. +.... +.+..+ .+
T Consensus 34 ~~l~~~~~~G~~~iEl~~~~~~~~~~-~~~~~~----~~~~~~~~~l~~~gl~i~~-~~~~~~~~~~l~~-~d~~~r~~~ 106 (295)
T 3cqj_A 34 ERLQLAKTLGFDFVEMSVDETDERLS-RLDWSR----EQRLALVNAIVETGVRVPS-MCLSAHRRFPLGS-EDDAVRAQG 106 (295)
T ss_dssp HHHHHHHHTTCSEEEEECCSSHHHHG-GGGCCH----HHHHHHHHHHHHHCCEEEE-EEEGGGGTSCTTC-SSHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEecCCcccccC-cccCCH----HHHHHHHHHHHHcCCeEEE-EecCcccCCCCCC-CCHHHHHHH
Confidence 47888999999999998654322111 112221 3344666778889998753 22110 001111 12
Q ss_pred HHHHHHHHHHHHHCCcCEEEEcCCc---CCCcHHHHHHHHHHHHHh---C--CCccEEEEeCCC
Q 012949 302 PSKVAYVAKELHDMGCFEISLGDTI---GVGTPGTVVPMLEAVMAV---V--PVEKLAVHLHDT 357 (452)
Q Consensus 302 ~e~l~~~a~~l~~~Gad~I~L~DT~---G~~~P~~v~~li~~l~~~---~--p~~~l~vH~Hnd 357 (452)
.+.+.+.++.+.++|++.|.+.-.. +.........+++.+++. . -++.|.+|.|+.
T Consensus 107 ~~~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~ 170 (295)
T 3cqj_A 107 LEIMRKAIQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLAMEIMDY 170 (295)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCCSCSSSCCCHHHHHHHHHHHHHHHHHHHHHTCEEEEECCSS
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCCCcCcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEeeCCC
Confidence 2456778888889999999885110 112233444444444332 1 146799999986
No 392
>3e02_A Uncharacterized protein DUF849; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.90A {Burkholderia xenovorans LB400}
Probab=82.25 E-value=10 Score=37.39 Aligned_cols=129 Identities=14% Similarity=0.144 Sum_probs=89.4
Q ss_pred CCCHHHHHHHHHHHHHCCcCEEEE-----cCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHc-C
Q 012949 299 AIPPSKVAYVAKELHDMGCFEISL-----GDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQM-G 372 (452)
Q Consensus 299 r~d~e~l~~~a~~l~~~Gad~I~L-----~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~a-G 372 (452)
+.+|+.+++-+.++.++||..|-| .|-.....|+.+++++..+|++.|. .|.+-..-..++....=++.+.. .
T Consensus 28 PvTpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~~~e~~~~IR~~~d~-iI~~TTgg~~~~~~eerla~~~~~~ 106 (311)
T 3e02_A 28 PITPEEIVKEGVAAAEAGAAMLHLHARDPLNGRPSQDPDLFMRFLPQLKERTDA-ILNITTGGGLGMSLDERLAPARAAR 106 (311)
T ss_dssp CCSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHTTTHHHHHHHCCC-EEEECSSCSTTCCHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHHHhCCc-EEEECCCCCCCCCHHHHHHHHHhcC
Confidence 468899999999999999876655 3556688899999999999998764 57666666677777777777643 5
Q ss_pred CCEEeeccc--CCCCCCCCC------------------C---CCCcccHHHHHHHHHcCCCCCC---CChhhHHHHHHHH
Q 012949 373 ISTVDCSVA--GLGGCPYAK------------------G---ASGNVATEDVVYMLSGLGVETN---VDLRKLMLAGDFI 426 (452)
Q Consensus 373 a~~VD~Sv~--GlGecP~a~------------------g---raGNaalE~vv~~L~~~Gi~t~---iDl~~L~~la~~v 426 (452)
-++.....+ -+|..|++. . ......+++++..++..|+.+. +|...|..+..++
T Consensus 107 Pe~aSln~gs~Nf~~~~~~~~~~~~~~~~e~~~~~~~~d~v~~n~~~~i~~~~~~~~e~Gi~pE~e~fd~g~l~~~~~l~ 186 (311)
T 3e02_A 107 PEVASMNMGSLNFNISQAAAKFDTFKFDWERPYLAGTRDFILSNTFSQIERGMTELGASGTRFEFECYDVGHLYNLAHFV 186 (311)
T ss_dssp CSEEEEECSCEECBCGGGGGGCSCCSSTTHHHHHHHGGGCEECCCHHHHHHHHHHHHTTTCEEEEEECSHHHHHHHHHHH
T ss_pred CCeeeecCCCceeccccchhhccccccccchhhcccCCCceecCCHHHHHHHHHHHHHcCCeEEEEEEcHHHHHHHHHHH
Confidence 555533322 122112110 0 0112348888888888898763 8889999888877
Q ss_pred HH
Q 012949 427 NK 428 (452)
Q Consensus 427 ~~ 428 (452)
.+
T Consensus 187 ~~ 188 (311)
T 3e02_A 187 DR 188 (311)
T ss_dssp HT
T ss_pred Hc
Confidence 66
No 393
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=82.00 E-value=2.5 Score=41.34 Aligned_cols=82 Identities=7% Similarity=0.113 Sum_probs=69.2
Q ss_pred CCCCHHHHHHHHHHHHHCCcCEEEEcCCcCC---CcHHHHHHHHHHHHHhCCC-ccEEEE-eCCCcCcHHHHHHHHHHcC
Q 012949 298 GAIPPSKVAYVAKELHDMGCFEISLGDTIGV---GTPGTVVPMLEAVMAVVPV-EKLAVH-LHDTYGQSLPNILISLQMG 372 (452)
Q Consensus 298 ~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~li~~l~~~~p~-~~l~vH-~Hnd~GlA~ANaLaAl~aG 372 (452)
+..|.+-+.++++.+.+.|++.|.++-|+|= ++.++-.++++.+++...+ ++|-++ .+++..-++..+..|-++|
T Consensus 20 g~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~G 99 (300)
T 3eb2_A 20 GRVRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEKLG 99 (300)
T ss_dssp SCBCHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcC
Confidence 5789999999999999999999999999995 7888888999988887543 455555 4688888999999999999
Q ss_pred CCEEeec
Q 012949 373 ISTVDCS 379 (452)
Q Consensus 373 a~~VD~S 379 (452)
|+.+=..
T Consensus 100 adavlv~ 106 (300)
T 3eb2_A 100 ADGILAI 106 (300)
T ss_dssp CSEEEEE
T ss_pred CCEEEEc
Confidence 9987653
No 394
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=81.95 E-value=12 Score=35.42 Aligned_cols=231 Identities=13% Similarity=0.065 Sum_probs=116.8
Q ss_pred cCCCCccEEEeCCccccCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEE
Q 012949 121 KGIPRFVKIVEVGPRDGLQNEKNTVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVL 200 (452)
Q Consensus 121 ~~~p~~V~I~D~TLRDG~Q~~~~~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l 200 (452)
+.++.++-|.-.++++ ..+. .+.++.+.++|++.||+.......+.+.-.+.+++.+.+++ .++++.++
T Consensus 19 ~~~~~klgi~~~~~~~-------~~~~---~~~l~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~-~gl~i~~~ 87 (296)
T 2g0w_A 19 NLKKCPITISSYTLGT-------EVSF---PKRVKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDE-HNMKVTEV 87 (296)
T ss_dssp ---CCCEEECGGGGTT-------TSCH---HHHHHHHHHTTCSEEEEEHHHHHHHHHTTCCHHHHHHHHHH-TTCEEEEE
T ss_pred CcCCCCceeechhcCC-------CCCH---HHHHHHHHHcCCCEEEeCHHHHHHHHhcCCcHHHHHHHHHH-cCCceEee
Confidence 4566677787777765 1344 44566778899999999753100011111244555555554 36666655
Q ss_pred ecchhhhhhhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhC
Q 012949 201 TPNLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVL 280 (452)
Q Consensus 201 ~~~~~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~ 280 (452)
.+... |....... +.......+.++.|.+.|++.|.+... . +.+.+...+.+.++.++| .
T Consensus 88 ~~~~~--------~~~~~~~~-~~~~~~~~~~i~~A~~lGa~~v~~g~~-~--------~~~~~~~~~~l~~l~~~a--~ 147 (296)
T 2g0w_A 88 EYITQ--------WGTAEDRT-AEQQKKEQTTFHMARLFGVKHINCGLL-E--------KIPEEQIIVALGELCDRA--E 147 (296)
T ss_dssp ECBCC--------CSSTTTCC-HHHHHHHHHHHHHHHHHTCCEEEECCC-S--------CCCHHHHHHHHHHHHHHH--T
T ss_pred hhhhc--------cccCChHH-HHHHHHHHHHHHHHHHcCCCEEEEcCC-C--------CCCHHHHHHHHHHHHHHh--c
Confidence 43111 10000000 000001134778888999999877321 1 124677888888888888 7
Q ss_pred CCcEEEEEEeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCcCC----CcHHHHHHHHHHHHHhCCCccEEEEeCC
Q 012949 281 SIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGV----GTPGTVVPMLEAVMAVVPVEKLAVHLHD 356 (452)
Q Consensus 281 G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~----~~P~~v~~li~~l~~~~p~~~l~vH~Hn 356 (452)
|+.+. +... +...-.+++.+.++++.+-. .--.+++ ||.=. ..|. . +.+.+++--..+|++|
T Consensus 148 Gv~l~--lE~~---~~~~~~~~~~~~~l~~~v~~-~~vgl~~-D~~H~~~~g~d~~------~-~~~~~~~~i~~vHl~D 213 (296)
T 2g0w_A 148 ELIIG--LEFM---PYSGVADLQAAWRVAEACGR-DNAQLIC-DTWHWARANQTAE------S-IKNVPADRIVSIQLCD 213 (296)
T ss_dssp TSEEE--EECC---TTSSSCSHHHHHHHHHHHTC-TTEEEEE-EHHHHHHTTCCGG------G-GTTCCGGGEEEEEECB
T ss_pred CCEEE--EEec---CCCCCCCHHHHHHHHHHhCC-CCeEEEE-ehhHhhccCCCHH------H-HHhcChhhEEEEEecC
Confidence 87654 4321 11223456667766665521 1113333 65211 1221 1 1122333346789998
Q ss_pred CcCcHHHHHHHHHHcCCCEEeecccCCCCCCCCCCCCCcccHHHHHHHHHcCCCC
Q 012949 357 TYGQSLPNILISLQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVE 411 (452)
Q Consensus 357 d~GlA~ANaLaAl~aGa~~VD~Sv~GlGecP~a~graGNaalE~vv~~L~~~Gi~ 411 (452)
..+.... ...+.+.. +.+ .+| .|..+.+.++..|+..|++
T Consensus 214 ~~~~~~~----------~~~~~~~~--~r~--~pG-~G~id~~~i~~~L~~~gy~ 253 (296)
T 2g0w_A 214 VHETPYK----------ELREESLH--DRL--APG-EGYGDTVGFAKILKEHGVN 253 (296)
T ss_dssp CCSSCCS----------SHHHHHHH--BCB--CTT-SSSSCHHHHHHHHHHHTCC
T ss_pred CCCCCch----------hhhhHHHh--cCC--CCC-CCCccHHHHHHHHHHcCCC
Confidence 7643110 00000000 011 122 5789999999999986664
No 395
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=81.90 E-value=24 Score=31.61 Aligned_cols=109 Identities=9% Similarity=0.011 Sum_probs=66.7
Q ss_pred cCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhC--CCcEEEEEEeeecCCCCCCCCHHHHHHHHHHHHHCC
Q 012949 239 AGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVL--SIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMG 316 (452)
Q Consensus 239 ~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~--G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~G 316 (452)
.|+|.|.+-.+.+ +..-.+.++..|+. +.++.+++... ..++ .+++.+.++|
T Consensus 24 ~~~diie~G~p~~---------------~~~g~~~i~~ir~~~~~~~i~~~~~~~--------~~~~---~~~~~~~~~G 77 (211)
T 3f4w_A 24 DDVDIIEVGTPFL---------------IREGVNAIKAIKEKYPHKEVLADAKIM--------DGGH---FESQLLFDAG 77 (211)
T ss_dssp GGCSEEEECHHHH---------------HHHTTHHHHHHHHHCTTSEEEEEEEEC--------SCHH---HHHHHHHHTT
T ss_pred cCccEEEeCcHHH---------------HhccHHHHHHHHHhCCCCEEEEEEEec--------cchH---HHHHHHHhcC
Confidence 5788877765211 12223455666664 67776666542 1122 2478888999
Q ss_pred cCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEeec
Q 012949 317 CFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCS 379 (452)
Q Consensus 317 ad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~S 379 (452)
+|.|.+.+..+ ++.+.++++.+++. + .++.+-.++- ......+..+.++|+++|-+.
T Consensus 78 ad~v~v~~~~~---~~~~~~~~~~~~~~-g-~~~~v~~~~~-~t~~~~~~~~~~~g~d~i~v~ 134 (211)
T 3f4w_A 78 ADYVTVLGVTD---VLTIQSCIRAAKEA-G-KQVVVDMICV-DDLPARVRLLEEAGADMLAVH 134 (211)
T ss_dssp CSEEEEETTSC---HHHHHHHHHHHHHH-T-CEEEEECTTC-SSHHHHHHHHHHHTCCEEEEE
T ss_pred CCEEEEeCCCC---hhHHHHHHHHHHHc-C-CeEEEEecCC-CCHHHHHHHHHHcCCCEEEEc
Confidence 99999987643 46667778877764 3 3444432221 223455788889999998553
No 396
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=81.78 E-value=6.4 Score=36.86 Aligned_cols=115 Identities=13% Similarity=0.047 Sum_probs=61.1
Q ss_pred hHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCC-HHHHHHHHH
Q 012949 232 GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIP-PSKVAYVAK 310 (452)
Q Consensus 232 ~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d-~e~l~~~a~ 310 (452)
.++.+.++|+|.|.+...... +.+..+++.+++.|..|. +-...+.+.. ... .+.+..+++
T Consensus 83 ~~~~~~~~gad~vtvh~~~G~---------------~~l~~~~~~~~~~g~~v~--vLt~~s~~~~-~~~~~~~~~~~a~ 144 (228)
T 3m47_A 83 ICRATFKAGADAIIVHGFPGA---------------DSVRACLNVAEEMGREVF--LLTEMSHPGA-EMFIQGAADEIAR 144 (228)
T ss_dssp HHHHHHHTTCSEEEEESTTCH---------------HHHHHHHHHHHHHTCEEE--EECCCCSGGG-GTTHHHHHHHHHH
T ss_pred HHHHHHhCCCCEEEEeccCCH---------------HHHHHHHHHHHhcCCCeE--EEEeCCCccH-HHHHHHHHHHHHH
Confidence 667788899999988764432 334456677777776553 2111222221 111 145566888
Q ss_pred HHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCC-ccEEEEeCCCcCc--HHHHHHHHHHcCCCEEee
Q 012949 311 ELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPV-EKLAVHLHDTYGQ--SLPNILISLQMGISTVDC 378 (452)
Q Consensus 311 ~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~-~~l~vH~Hnd~Gl--A~ANaLaAl~aGa~~VD~ 378 (452)
...+.|++.+.. |.-.|+++.. +++..|. ..+ + +.|- .-++. .++++|++++=+
T Consensus 145 ~a~~~G~~GvV~----~at~~~e~~~----ir~~~~~~~~i-v----~PGI~~~g~~p-~~~~aGad~iVv 201 (228)
T 3m47_A 145 MGVDLGVKNYVG----PSTRPERLSR----LREIIGQDSFL-I----SPGVGAQGGDP-GETLRFADAIIV 201 (228)
T ss_dssp HHHHTTCCEEEC----CSSCHHHHHH----HHHHHCSSSEE-E----ECC----------CGGGTCSEEEE
T ss_pred HHHHhCCcEEEE----CCCChHHHHH----HHHhcCCCCEE-E----ecCcCcCCCCH-hHHHcCCCEEEE
Confidence 888999987653 3334666554 4444442 111 0 1111 11244 888999986533
No 397
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=81.72 E-value=3.8 Score=39.76 Aligned_cols=97 Identities=21% Similarity=0.290 Sum_probs=63.3
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 310 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~ 310 (452)
+.+++|.+.|++.|-+.+.. +.........+..|+++.+++++|+++|+.|.+ | ++ .+.+.+..+++
T Consensus 167 ~qI~aA~~~GAd~IELhTG~---YA~a~~~~~~~~el~rl~~aA~~A~~lGL~VnA------G---HG-L~y~Nv~~ia~ 233 (278)
T 3gk0_A 167 AQIRAAHETGAPVIELHTGR---YADAHDAAEQQREFERIATGVDAGIALGLKVNA------G---HG-LHYTNVQAIAA 233 (278)
T ss_dssp HHHHHHHHHTCSEEEECCHH---HHTCSSHHHHHHHHHHHHHHHHHHHHTTCEEEE------C---TT-CCTTTHHHHHT
T ss_pred HHHHHHHHhCcCEEEEecch---hhccCCchhHHHHHHHHHHHHHHHHHcCCEEec------C---CC-CCHHHHHHHHh
Confidence 48999999999999997641 111100112556899999999999999999872 1 22 33444544432
Q ss_pred HHHHCCcCEEEE-----cCCcCCCcHHHHHHHHHHHHH
Q 012949 311 ELHDMGCFEISL-----GDTIGVGTPGTVVPMLEAVMA 343 (452)
Q Consensus 311 ~l~~~Gad~I~L-----~DT~G~~~P~~v~~li~~l~~ 343 (452)
+ -+...++| ++.+=++.+..|+++.+.+++
T Consensus 234 -i--p~i~ElnIGHaiIa~Al~~Gl~~AVr~mk~lm~~ 268 (278)
T 3gk0_A 234 -L--PGIAELNIGHAIVAHAVFVGWDNAVREMKAIMVA 268 (278)
T ss_dssp -C--TTEEEEEECHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred -C--CCCeEEecCHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 1 24677776 455666677777777766654
No 398
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=81.58 E-value=5.7 Score=38.95 Aligned_cols=22 Identities=14% Similarity=0.083 Sum_probs=10.4
Q ss_pred CHHHHHHHHHHHHHCCcCEEEE
Q 012949 301 PPSKVAYVAKELHDMGCFEISL 322 (452)
Q Consensus 301 d~e~l~~~a~~l~~~Gad~I~L 322 (452)
+.+.-.++++.+.++|++.|-+
T Consensus 26 ~~e~k~~i~~~L~~~Gv~~IE~ 47 (307)
T 1ydo_A 26 ATEDKITWINQLSRTGLSYIEI 47 (307)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEE
Confidence 3444444455555555444444
No 399
>4djd_C C/Fe-SP, corrinoid/iron-sulfur protein large subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_C* 4djf_C*
Probab=81.55 E-value=13 Score=38.63 Aligned_cols=116 Identities=16% Similarity=0.151 Sum_probs=72.5
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 310 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~ 310 (452)
+-+++|++++.+...+..++++ +++.++...|++.|..|.+ + .+ +.+.+.++.+
T Consensus 166 evleaALea~a~~~plI~sat~---------------dn~e~m~~lAa~y~~pVi~--~----~~-----dl~~lkelv~ 219 (446)
T 4djd_C 166 DVLKEALAGVADRKPLLYAATG---------------ANYEAMTALAKENNCPLAV--Y----GN-----GLEELAELVD 219 (446)
T ss_dssp HHHHHHHGGGGGGCCEEEEECT---------------TTHHHHHHHHHHTTCCEEE--E----CS-----SHHHHHHHHH
T ss_pred HHHHHHHHhhcCcCCeeEecch---------------hhHHHHHHHHHHcCCcEEE--E----ec-----cHHHHHHHHH
Confidence 3778899888776556666553 4556677888999988762 2 11 6789999999
Q ss_pred HHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHh----------CCCccEEEEeCCCcCcHHHHHHHHHHcCCCEE
Q 012949 311 ELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAV----------VPVEKLAVHLHDTYGQSLPNILISLQMGISTV 376 (452)
Q Consensus 311 ~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~----------~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~V 376 (452)
.+.++|++.|.| |...... ...++....+|.. +|. |.+-...|--+-..-+...+..|+++|
T Consensus 220 ~a~~~GI~~IvL-DPG~~g~-~~t~~~~~~iRr~AL~~~d~~LgyPv--i~~~sr~d~~~E~t~A~~~i~kga~Iv 291 (446)
T 4djd_C 220 KIVALGHKQLVL-DPGARET-SRAIADFTQIRRLAIKKRFRSFGYPI--IALTTAANPLDEVLQAVNYVTKYASLV 291 (446)
T ss_dssp HHHHTTCCCEEE-ECCCCSH-HHHHHHHHHHHHHHHHSCCGGGCSCB--EEECCCSSHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHCCCCcEEE-CCCchhH-HHHHHHHHHHHHHhhhccCcccCCCE--EeccCCccHHHHHHHHHHHHHcCCeEE
Confidence 999999998877 6543222 2333322223332 242 555566553333444455667788765
No 400
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=81.50 E-value=28 Score=33.88 Aligned_cols=100 Identities=14% Similarity=0.122 Sum_probs=61.7
Q ss_pred hHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHHH
Q 012949 232 GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKE 311 (452)
Q Consensus 232 ~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~ 311 (452)
.++..++.|++.|-+.-+..|. .-.|.+|-.+-++.+++.++. .++|.+.+ +..+.+...++++.
T Consensus 34 lv~~li~~Gv~gl~v~GtTGE~-----~~Ls~~Er~~v~~~~~~~~~g-rvpviaGv---------g~~~t~~ai~la~~ 98 (309)
T 3fkr_A 34 AVDFMIDAGSDGLCILANFSEQ-----FAITDDERDVLTRTILEHVAG-RVPVIVTT---------SHYSTQVCAARSLR 98 (309)
T ss_dssp HHHHHHHTTCSCEEESSGGGTG-----GGSCHHHHHHHHHHHHHHHTT-SSCEEEEC---------CCSSHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECccccCc-----ccCCHHHHHHHHHHHHHHhCC-CCcEEEec---------CCchHHHHHHHHHH
Confidence 5667778899988887666664 235666666666555555532 34443211 22345677778888
Q ss_pred HHHCCcCEEEEcCCcC----CCcHHHHHHHHHHHHHhCC
Q 012949 312 LHDMGCFEISLGDTIG----VGTPGTVVPMLEAVMAVVP 346 (452)
Q Consensus 312 l~~~Gad~I~L~DT~G----~~~P~~v~~li~~l~~~~p 346 (452)
+.++|+|.+-+.=..= -.+++.+.+.++.+.+..+
T Consensus 99 A~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va~a~~ 137 (309)
T 3fkr_A 99 AQQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDAIA 137 (309)
T ss_dssp HHHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHHCS
T ss_pred HHHcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 8888888666543331 2356777777777766653
No 401
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3
Probab=81.45 E-value=17 Score=34.35 Aligned_cols=57 Identities=9% Similarity=-0.139 Sum_probs=42.0
Q ss_pred cHHhHHHHH-HcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEE
Q 012949 229 YLQGFEAAI-AAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYV 288 (452)
Q Consensus 229 ~~~~ie~a~-~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l 288 (452)
+.++++..+ +.|+..||+.+.-.+. ...-.+.+..++.+.+++++|++.|+.|...+
T Consensus 40 ~~~d~~~l~~~~G~N~vR~~~~~~~~---~~~~~~~~~~~~~ld~~v~~a~~~Gi~vild~ 97 (291)
T 1egz_A 40 TADTVASLKKDWKSSIVRAAMGVQES---GGYLQDPAGNKAKVERVVDAAIANDMYAIIGW 97 (291)
T ss_dssp SHHHHHHHHHTTCCCEEEEEEECSST---TSTTTCHHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHHHHHcCCCEEEEecccccc---CCCcCCHHHHHHHHHHHHHHHHHCCCEEEEEc
Confidence 346898888 8999999998764310 01111345678999999999999999987655
No 402
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=81.40 E-value=20 Score=35.90 Aligned_cols=124 Identities=13% Similarity=0.055 Sum_probs=78.1
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecC--------------CCC---------------C----CCCHH---
Q 012949 260 NCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGC--------------PVE---------------G----AIPPS--- 303 (452)
Q Consensus 260 ~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~--------------p~~---------------~----r~d~e--- 303 (452)
+...++.++..+++++.+++.|-.+.+-|... |- |-+ . ..+.+
T Consensus 71 gi~~d~~i~~~k~l~~avH~~G~~i~~QL~H~-Gr~~~~~~~~g~~~vapS~i~~~~~~~~~~~~~~~~~pr~mt~~eI~ 149 (362)
T 4ab4_A 71 GIWNDEQVRGWNNVTKAVHAAGGRIFLQLWHV-GRISHPSYLNGELPVAPSAIQPKGHVSLVRPLSDYPTPRALETEEIN 149 (362)
T ss_dssp BCSSHHHHHHHHHHHHHHHHTTCCEEEEEECC-TTSCCGGGTTTCCCEESSCCCCSSBCSSCSSCCBCCCCEECCHHHHH
T ss_pred CcCCHHHHHHHHHHHHHHHhcCCEEEEEeccC-cccccccccCCCcccCCCCCCCCccccccccccCCCCCCcCCHHHHH
Confidence 44456778889999999999999887777652 10 000 0 01222
Q ss_pred ----HHHHHHHHHHHCCcCEEEEcCC-------------------cCCCc---HHHHHHHHHHHHHhCCCccEEEEeCCC
Q 012949 304 ----KVAYVAKELHDMGCFEISLGDT-------------------IGVGT---PGTVVPMLEAVMAVVPVEKLAVHLHDT 357 (452)
Q Consensus 304 ----~l~~~a~~l~~~Gad~I~L~DT-------------------~G~~~---P~~v~~li~~l~~~~p~~~l~vH~Hnd 357 (452)
.+.+.|+.+.++|.|.|.|-=. .|... +.-+.++|+++++.++..+|.+-.+-+
T Consensus 150 ~ii~~f~~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls~~ 229 (362)
T 4ab4_A 150 DIVEAYRSGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLAPR 229 (362)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTT
T ss_pred HHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEeecc
Confidence 3445667788999998887433 34322 234678899999988644777766643
Q ss_pred --c-Cc--------HHHHHHHHHHcCCCEEeecccCCC
Q 012949 358 --Y-GQ--------SLPNILISLQMGISTVDCSVAGLG 384 (452)
Q Consensus 358 --~-Gl--------A~ANaLaAl~aGa~~VD~Sv~GlG 384 (452)
+ |+ ++.-+.+.-++|+++|+.+-...|
T Consensus 230 ~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~ 267 (362)
T 4ab4_A 230 ADAHDMGDADRAETFTYVARELGKRGIAFICSREREAD 267 (362)
T ss_dssp CCSSSCCCTTHHHHHHHHHHHHHHTTCSEEEEECCCCT
T ss_pred ccccccCCCCcHHHHHHHHHHHHHhCCCEEEECCCCCC
Confidence 1 11 222233344689999999876533
No 403
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=81.36 E-value=5 Score=38.96 Aligned_cols=37 Identities=11% Similarity=0.123 Sum_probs=20.5
Q ss_pred EEEEe-cCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcE
Q 012949 244 VAIFA-SASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPV 284 (452)
Q Consensus 244 V~i~~-s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V 284 (452)
|.|+. ..-|-++......+.++.+ ++++...+.|++.
T Consensus 6 v~i~D~tlRDG~Q~~~~~~~~e~k~----~i~~~L~~~Gv~~ 43 (298)
T 2cw6_A 6 VKIVEVGPRDGLQNEKNIVSTPVKI----KLIDMLSEAGLSV 43 (298)
T ss_dssp CEEEECTTTHHHHTCSSCCCHHHHH----HHHHHHHHTTCSE
T ss_pred eEEEECCCCcccCCCCCCCCHHHHH----HHHHHHHHcCcCE
Confidence 44543 4555544444556666555 3445556678764
No 404
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=81.36 E-value=24 Score=35.87 Aligned_cols=120 Identities=11% Similarity=0.124 Sum_probs=76.7
Q ss_pred CHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecC---------------CCC-----------------CCCCH-------
Q 012949 262 SIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGC---------------PVE-----------------GAIPP------- 302 (452)
Q Consensus 262 s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~---------------p~~-----------------~r~d~------- 302 (452)
..++.++..+++++.+++.|-++.+-|..+ |- |-+ ....|
T Consensus 87 ~~d~~i~~~k~l~~avh~~G~~i~~QL~H~-Gr~~~~~~~~~g~~~~apS~v~~~~~~~~~~~~g~~~~~~~p~~mt~~e 165 (402)
T 2hsa_B 87 FTKEQVREWKKIVDVVHAKGAVIFCQLWHV-GRASHEVYQPAGAAPISSTEKPISNRWRILMPDGTHGIYPKPRAIGTYE 165 (402)
T ss_dssp SSHHHHHHHHHHHHHHHHTTCEEEEEEECC-TTSCCGGGCTTCCCCEESCSCCCCTTCEEECTTSCEEECCCCEECCGGG
T ss_pred CCHHHHHHHHHHHHHHHhcCCeEEEEeccC-CcccccccccCCCccccCCCcccccccccccccccccCCCCCccCCHHH
Confidence 345667778888889999998877667641 10 000 00123
Q ss_pred -----HHHHHHHHHHHHCCcCEEEEc-------------------CCcCCCc---HHHHHHHHHHHHHhCCCccEEEEeC
Q 012949 303 -----SKVAYVAKELHDMGCFEISLG-------------------DTIGVGT---PGTVVPMLEAVMAVVPVEKLAVHLH 355 (452)
Q Consensus 303 -----e~l~~~a~~l~~~Gad~I~L~-------------------DT~G~~~---P~~v~~li~~l~~~~p~~~l~vH~H 355 (452)
+.+.+.|+.+.++|.|.|.|- |-.|... +.-+.++|+++++.++..+|.+-..
T Consensus 166 I~~ii~~f~~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls 245 (402)
T 2hsa_B 166 ISQVVEDYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVS 245 (402)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEec
Confidence 567778888999999988762 3344433 4447899999999987447888754
Q ss_pred CC-------cCc----HHHHHHHHHHcC------CCEEeecccC
Q 012949 356 DT-------YGQ----SLPNILISLQMG------ISTVDCSVAG 382 (452)
Q Consensus 356 nd-------~Gl----A~ANaLaAl~aG------a~~VD~Sv~G 382 (452)
-+ .|. ++.-+-+.-++| +++|+.+-..
T Consensus 246 ~~~~~~g~~~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~ 289 (402)
T 2hsa_B 246 PAIDHLDAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPR 289 (402)
T ss_dssp SSCCSTTCCCSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCC
T ss_pred cccccCCCCCCCCHHHHHHHHHHHHhcCCccCCceEEEEEecCc
Confidence 32 223 222333334688 9999997543
No 405
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=81.09 E-value=22 Score=33.11 Aligned_cols=141 Identities=18% Similarity=0.151 Sum_probs=87.2
Q ss_pred hHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHHH
Q 012949 232 GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKE 311 (452)
Q Consensus 232 ~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~ 311 (452)
-++.|.+.|++-|-+.-. + +..+ .+..+..++. ++.+.|+|.. ..+.+....-++.
T Consensus 24 l~~~a~~~~~~aVcv~p~----~------------v~~~---~~~l~~~~v~----v~~vigFP~G-~~~~~~k~~e~~~ 79 (220)
T 1ub3_A 24 AAEEALEYGFYGLCIPPS----Y------------VAWV---RARYPHAPFR----LVTVVGFPLG-YQEKEVKALEAAL 79 (220)
T ss_dssp HHHHHHHHTCSEEECCGG----G------------HHHH---HHHCTTCSSE----EEEEESTTTC-CSCHHHHHHHHHH
T ss_pred HHHHHHHhCCCEEEECHH----H------------HHHH---HHHhCCCCce----EEEEecCCCC-CCchHHHHHHHHH
Confidence 567778888887765421 1 1111 1222222344 3444566754 4556666677888
Q ss_pred HHHCCcCEEEEcCCcCCC---cHHHHHHHHHHHHHhCCC--cc--EEEEeCCCcCcHHHHHHHHHHcCCCEEeecccCCC
Q 012949 312 LHDMGCFEISLGDTIGVG---TPGTVVPMLEAVMAVVPV--EK--LAVHLHDTYGQSLPNILISLQMGISTVDCSVAGLG 384 (452)
Q Consensus 312 l~~~Gad~I~L~DT~G~~---~P~~v~~li~~l~~~~p~--~~--l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~Sv~GlG 384 (452)
+.+.|||.|-+.=-+|.+ .-..+.+-+..+++..+. ++ |+.-..++-- =...+..|.++|||+|=++- |.
T Consensus 80 Ai~~GAdevd~vinig~~~~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~l~~e~-i~~a~~ia~eaGADfVKTsT-Gf- 156 (220)
T 1ub3_A 80 ACARGADEVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQAVLKVILETGYFSPEE-IARLAEAAIRGGADFLKTST-GF- 156 (220)
T ss_dssp HHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEEECCGGGSCHHH-HHHHHHHHHHHTCSEEECCC-SS-
T ss_pred HHHcCCCEEEecccchhhhCCCHHHHHHHHHHHHHHHcCCCceEEEecCCCCHHH-HHHHHHHHHHhCCCEEEeCC-CC-
Confidence 999999999887777753 567788888888887643 22 2323333222 23456678899999999885 22
Q ss_pred CCCCCCCCCCcccHHHHHHHHH
Q 012949 385 GCPYAKGASGNVATEDVVYMLS 406 (452)
Q Consensus 385 ecP~a~graGNaalE~vv~~L~ 406 (452)
.+|++..|++-.+.+
T Consensus 157 -------~~~gat~~dv~~m~~ 171 (220)
T 1ub3_A 157 -------GPRGASLEDVALLVR 171 (220)
T ss_dssp -------SSCCCCHHHHHHHHH
T ss_pred -------CCCCCCHHHHHHHHH
Confidence 235677787777665
No 406
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=81.01 E-value=8.8 Score=38.19 Aligned_cols=91 Identities=18% Similarity=0.168 Sum_probs=60.5
Q ss_pred hCCCcEEEEEEeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEc----------CCcCCC---cHHHHHHHHHHHHHhC
Q 012949 279 VLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLG----------DTIGVG---TPGTVVPMLEAVMAVV 345 (452)
Q Consensus 279 ~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~----------DT~G~~---~P~~v~~li~~l~~~~ 345 (452)
..+.++.+.|. | .+++.+.+.++.+.++|+|.|.|- |-.|.. .|..+.++++.+++.+
T Consensus 55 ~~~~p~~vQL~---g------~~p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v 125 (350)
T 3b0p_A 55 PEEHPIALQLA---G------SDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAV 125 (350)
T ss_dssp GGGCSEEEEEE---C------SCHHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHC
T ss_pred CCCCeEEEEeC---C------CCHHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHh
Confidence 44556655453 2 257888888888888999877664 444443 4888999999999887
Q ss_pred CCccEEEEe---CCCcC---cHHHHHHHHHHcCCCEEeec
Q 012949 346 PVEKLAVHL---HDTYG---QSLPNILISLQMGISTVDCS 379 (452)
Q Consensus 346 p~~~l~vH~---Hnd~G---lA~ANaLaAl~aGa~~VD~S 379 (452)
. .+|.+-. -++.. ..+.-+..+.++|++.|.++
T Consensus 126 ~-~PV~vKiR~g~~~~~~~~~~~~~a~~l~~aG~d~I~V~ 164 (350)
T 3b0p_A 126 R-VPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVH 164 (350)
T ss_dssp S-SCEEEEEESCBTTCCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred C-CceEEEEecCcCccccHHHHHHHHHHHHHcCCCEEEEe
Confidence 3 4677732 23322 23444556668999988875
No 407
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=80.98 E-value=12 Score=35.27 Aligned_cols=130 Identities=18% Similarity=0.127 Sum_probs=75.2
Q ss_pred HHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEecchhhhhhhhhhhhhccchhhhhhhhccH
Q 012949 151 VELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLWVYL 230 (452)
Q Consensus 151 ~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~~~~ 230 (452)
.+.++.|.+.|++.|-++--... ++-...-...+.+.+++..++ +++....
T Consensus 56 ~~aa~~L~~ag~d~i~~aCtsas-~~~G~~~~~~~~~~l~~~~~i--Pv~~~~~-------------------------- 106 (240)
T 3ixl_A 56 VDHARRLQKQGAAVVSLMCTSLS-FYRGAAFNAALTVAMREATGL--PCTTMST-------------------------- 106 (240)
T ss_dssp HHHHHHHHHTTEEEEEECCHHHH-HTTCHHHHHHHHHHHHHHHSS--CEEEHHH--------------------------
T ss_pred HHHHHHhccCCCCEEEECCcHHH-HhcccchHHHHHHHHHhccCC--CEECHHH--------------------------
Confidence 44478898999999999621100 000000112455666654343 3333211
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCC---CCCCCHHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPV---EGAIPPSKVAY 307 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~---~~r~d~e~l~~ 307 (452)
.-++++...|+++|.+..+-.. +.-....++.++.|++|..--+ ++.++ .++.+++.+.+
T Consensus 107 A~~~al~~~g~~rvglltpy~~---------------~~~~~~~~~l~~~Giev~~~~~--~~~~~~~~~~~~~~~~~~~ 169 (240)
T 3ixl_A 107 AVLNGLRALGVRRVALATAYID---------------DVNERLAAFLAEESLVPTGCRS--LGITGVEAMARVDTATLVD 169 (240)
T ss_dssp HHHHHHHHTTCSEEEEEESSCH---------------HHHHHHHHHHHHTTCEEEEEEE--CCCCCHHHHHTCCHHHHHH
T ss_pred HHHHHHHHhCCCEEEEEeCChH---------------HHHHHHHHHHHHCCCEEecccc--CCCCCcchhhcCCHHHHHH
Confidence 1456667789999999876322 1112334566678998753322 22222 23567888888
Q ss_pred HHHH-H-HHCCcCEEEEcCCc
Q 012949 308 VAKE-L-HDMGCFEISLGDTI 326 (452)
Q Consensus 308 ~a~~-l-~~~Gad~I~L~DT~ 326 (452)
+++. + .+-|+|.|.|.-|-
T Consensus 170 ~~~~~l~~~~~adaivL~CT~ 190 (240)
T 3ixl_A 170 LCVRAFEAAPDSDGILLSSGG 190 (240)
T ss_dssp HHHHHHHTSTTCSEEEEECTT
T ss_pred HHHHHhhcCCCCCEEEEeCCC
Confidence 8888 6 66789999998663
No 408
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=80.93 E-value=11 Score=35.00 Aligned_cols=118 Identities=17% Similarity=0.090 Sum_probs=66.4
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCC-cEEEEEEeeecCCCCC-----CCCHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSI-PVRGYVSCVVGCPVEG-----AIPPSK 304 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~-~V~~~l~~~~g~p~~~-----r~d~e~ 304 (452)
+.++.+.+.|.+.|.++....... .....+. +.+.++.+.+++.|+ .+.+.-.+.. ...+ ....+.
T Consensus 18 ~~~~~~~~~G~~~vEl~~~~~~~~--~~~~~~~----~~~~~~~~~~~~~gl~~~~~h~~~~~--~l~s~~~~r~~~~~~ 89 (270)
T 3aam_A 18 GAVEEATALGLTAFQIFAKSPRSW--RPRALSP----AEVEAFRALREASGGLPAVIHASYLV--NLGAEGELWEKSVAS 89 (270)
T ss_dssp HHHHHHHHHTCSCEEEESSCTTCC--SCCCCCH----HHHHHHHHHHHHTTCCCEEEECCTTC--CTTCSSTHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEeCCCCCcC--cCCCCCH----HHHHHHHHHHHHcCCceEEEecCccc--CCCCCHHHHHHHHHH
Confidence 367889999999999965321100 0011121 234456677888998 5542211110 0111 012345
Q ss_pred HHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCC---CccEEEEeCCCc
Q 012949 305 VAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVP---VEKLAVHLHDTY 358 (452)
Q Consensus 305 l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p---~~~l~vH~Hnd~ 358 (452)
+.+.++.+.++|+..|.+-- |...+..+.+.++.+.+... ++.|.++.|+..
T Consensus 90 ~~~~i~~a~~lGa~~vv~h~--g~~~~~~~~~~l~~l~~~a~~~~gv~l~lEn~~~~ 144 (270)
T 3aam_A 90 LADDLEKAALLGVEYVVVHP--GSGRPERVKEGALKALRLAGVRSRPVLLVENTAGG 144 (270)
T ss_dssp HHHHHHHHHHHTCCEEEECC--CBSCHHHHHHHHHHHHHHHTCCSSSEEEEECCCCC
T ss_pred HHHHHHHHHHcCCCEEEECC--CCCCHHHHHHHHHHHHHhhcccCCCEEEEecCCCC
Confidence 67777888889999887631 22234566666666655542 567888888544
No 409
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=80.87 E-value=15 Score=35.48 Aligned_cols=100 Identities=16% Similarity=0.117 Sum_probs=63.9
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 310 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~ 310 (452)
+.++..++.|++.+-+.-+..|. .-.|.+|-.+-++.+++.++. .++|.+.+ +..+.+...++++
T Consensus 26 ~lv~~li~~Gv~gl~~~GttGE~-----~~Ls~~Er~~v~~~~~~~~~g-r~pvi~Gv---------g~~~t~~ai~la~ 90 (291)
T 3a5f_A 26 ELIEWHIKSKTDAIIVCGTTGEA-----TTMTETERKETIKFVIDKVNK-RIPVIAGT---------GSNNTAASIAMSK 90 (291)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTG-----GGSCHHHHHHHHHHHHHHHTT-SSCEEEEC---------CCSSHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECccccCh-----hhCCHHHHHHHHHHHHHHhCC-CCcEEEeC---------CcccHHHHHHHHH
Confidence 36677788999998887776664 335777777766666666543 34554211 2345677888999
Q ss_pred HHHHCCcCEEEEc-CCcCCCcHHHHHHHHHHHHHhC
Q 012949 311 ELHDMGCFEISLG-DTIGVGTPGTVVPMLEAVMAVV 345 (452)
Q Consensus 311 ~l~~~Gad~I~L~-DT~G~~~P~~v~~li~~l~~~~ 345 (452)
.+.++|+|.+-+. =..--.+++.+.+.++.+.+..
T Consensus 91 ~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~ 126 (291)
T 3a5f_A 91 WAESIGVDGLLVITPYYNKTTQKGLVKHFKAVSDAV 126 (291)
T ss_dssp HHHHTTCSEEEEECCCSSCCCHHHHHHHC-CTGGGC
T ss_pred HHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhc
Confidence 9999999866543 3333345666666666665554
No 410
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=80.70 E-value=28 Score=33.54 Aligned_cols=100 Identities=13% Similarity=0.091 Sum_probs=62.4
Q ss_pred hHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHHH
Q 012949 232 GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKE 311 (452)
Q Consensus 232 ~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~ 311 (452)
.++..++.|++.|-+.-+..|. .-.|.+|-.+-++.+++.++. .++|.+.+ +..+.+...++++.
T Consensus 26 lv~~li~~Gv~gl~~~GttGE~-----~~Ls~~Er~~v~~~~~~~~~g-r~pviaGv---------g~~~t~~ai~la~~ 90 (292)
T 2vc6_A 26 LVEWQIEEGSFGLVPCGTTGES-----PTLSKSEHEQVVEITIKTANG-RVPVIAGA---------GSNSTAEAIAFVRH 90 (292)
T ss_dssp HHHHHHHTTCSEEETTSGGGTG-----GGSCHHHHHHHHHHHHHHHTT-SSCBEEEC---------CCSSHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECccccCh-----hhCCHHHHHHHHHHHHHHhCC-CCcEEEec---------CCccHHHHHHHHHH
Confidence 6677778899988777666664 235667666666666655543 24443211 22345677778888
Q ss_pred HHHCCcCEEEE-cCCcCCCcHHHHHHHHHHHHHhCC
Q 012949 312 LHDMGCFEISL-GDTIGVGTPGTVVPMLEAVMAVVP 346 (452)
Q Consensus 312 l~~~Gad~I~L-~DT~G~~~P~~v~~li~~l~~~~p 346 (452)
+.++|+|.+-+ +=..--.+++.+.+.++.+.+..+
T Consensus 91 A~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~ 126 (292)
T 2vc6_A 91 AQNAGADGVLIVSPYYNKPTQEGIYQHFKAIDAAST 126 (292)
T ss_dssp HHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCS
T ss_pred HHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 88888885544 333333466777777777777654
No 411
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=80.67 E-value=10 Score=37.95 Aligned_cols=123 Identities=18% Similarity=0.096 Sum_probs=76.1
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeec---CC-----------------------CC-----C------CCCH
Q 012949 260 NCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVG---CP-----------------------VE-----G------AIPP 302 (452)
Q Consensus 260 ~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g---~p-----------------------~~-----~------r~d~ 302 (452)
+...++.++..+++++.+++.|-.+.+-|.+. | .+ -. + ..+.
T Consensus 72 ~i~~d~~i~~~~~~~~~vh~~G~~i~~QL~H~-Gr~~~~~~~~~~~~~~~~~~~~~~~~~~pS~~~~~~~~~~~p~~mt~ 150 (363)
T 3l5l_A 72 GIWSDAHAQAFVPVVQAIKAAGSVPGIQIAHA-GRKASANRPWEGDDHIAADDTRGWETIAPSAIAFGAHLPKVPREMTL 150 (363)
T ss_dssp BCSSHHHHHHHHHHHHHHHHTTCEEEEEEECC-GGGCSBCCGGGTSSBCCTTCTTCCCCEESSSCCCBTTBCCCCEECCH
T ss_pred eecCHHHHHHHHHHHHHHHhcCCEEEEEeccC-CccccccccccccccccccccCCCcccCCCCCccCCCCCCCCccCCH
Confidence 44456778889999999999999887767653 1 00 00 0 0122
Q ss_pred H-------HHHHHHHHHHHCCcCEEEEc-------------------CCcCCCcHH---HHHHHHHHHHHhCC-CccEEE
Q 012949 303 S-------KVAYVAKELHDMGCFEISLG-------------------DTIGVGTPG---TVVPMLEAVMAVVP-VEKLAV 352 (452)
Q Consensus 303 e-------~l~~~a~~l~~~Gad~I~L~-------------------DT~G~~~P~---~v~~li~~l~~~~p-~~~l~v 352 (452)
+ .+.+.|+.+.++|.|.|.|- |-.|...-. -+.++|+++++.++ +.+|.+
T Consensus 151 ~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~v 230 (363)
T 3l5l_A 151 DDIARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTA 230 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEE
Confidence 2 34456677888999988774 444443222 36788999999886 345666
Q ss_pred EeCC----CcC-cHHHH----HHHHHHcCCCEEeecccCC
Q 012949 353 HLHD----TYG-QSLPN----ILISLQMGISTVDCSVAGL 383 (452)
Q Consensus 353 H~Hn----d~G-lA~AN----aLaAl~aGa~~VD~Sv~Gl 383 (452)
-..- +-| .-... +-..-++|+++|+.+..+.
T Consensus 231 Ris~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~ 270 (363)
T 3l5l_A 231 RFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFT 270 (363)
T ss_dssp EEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred EecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCcc
Confidence 4431 113 22232 3334468999999987653
No 412
>3nzq_A ADC, biosynthetic arginine decarboxylase; alpha-beta protein, structural genomics, PSI-biology, protei structure initiative; 3.10A {Escherichia coli}
Probab=80.60 E-value=66 Score=34.96 Aligned_cols=102 Identities=15% Similarity=0.089 Sum_probs=57.3
Q ss_pred HhHHHHHHcCCC--EEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHH
Q 012949 231 QGFEAAIAAGAK--EVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYV 308 (452)
Q Consensus 231 ~~ie~a~~~Gi~--~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~ 308 (452)
..+..|+++|++ .+.++.+. ++.++ ++ .++ .+++.|..+... + . +.+.+..+
T Consensus 153 gEl~~al~aG~~p~~iIv~nG~----------K~~ee-I~---~Al-~~~~~G~~v~iv----V----D---S~~ELe~L 206 (666)
T 3nzq_A 153 AELMAVLAHAGMTRSVIVCNGY----------KDREY-IR---LAL-IGEKMGHKVYLV----I----E---KMSEIAIV 206 (666)
T ss_dssp HHHHHHHHHHTTSCCEEEECSC----------CCHHH-HH---HHH-HHHHTTCEEEEE----E----C---SHHHHHHH
T ss_pred HHHHHHHHcCCCCCcEEEEcCC----------CCHHH-HH---HHH-HhhccCCCEEEE----E----C---CHHHHHHH
Confidence 478888888875 35455432 22221 21 222 223567655321 2 1 35677777
Q ss_pred HHHHHHCCc--C-EEEE--c--------CCcC-----CCcHHHHHHHHHHHHHhCCCcc--EEEEeCCCcC
Q 012949 309 AKELHDMGC--F-EISL--G--------DTIG-----VGTPGTVVPMLEAVMAVVPVEK--LAVHLHDTYG 359 (452)
Q Consensus 309 a~~l~~~Ga--d-~I~L--~--------DT~G-----~~~P~~v~~li~~l~~~~p~~~--l~vH~Hnd~G 359 (452)
.+.+.+.|. . .|++ . +|.| ..+|.++.++++.+++ .+... .++|+|---+
T Consensus 207 ~~~A~~~g~~~~V~LRVnp~~~~~~~~i~TG~~~SKFGi~~~e~~~ll~~l~~-~~~L~~l~GLHfHiGSq 276 (666)
T 3nzq_A 207 LDEAERLNVVPRLGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLRE-AGRLDSLQLLHFHLGSQ 276 (666)
T ss_dssp HHHHHHTTCCCCEEEEBCCSSSCSSTTCSSSSSCCCSCBCHHHHHHHHHHHHH-TTCTTTEEEEECCCCSS
T ss_pred HHHHHHcCCCceEEEEEEecCCCCcCccccCCCCCcCcCCHHHHHHHHHHHHh-CCCCCCeEEEEEECCCC
Confidence 777777663 2 3333 1 2221 2478889999988876 45543 5999997655
No 413
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=80.52 E-value=12 Score=36.55 Aligned_cols=134 Identities=16% Similarity=0.052 Sum_probs=83.3
Q ss_pred HHHHHHcCCCEEEEEe-cCChHHHhhh-cCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHH
Q 012949 233 FEAAIAAGAKEVAIFA-SASEAFSKSN-INCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 310 (452)
Q Consensus 233 ie~a~~~Gi~~V~i~~-s~Sd~~~~~~-~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~ 310 (452)
...+.++|++.|.+.- +++-.+-..- .-.|.++.+..++.+.+. ...+|.+. .|... -+++.+.+.++
T Consensus 28 A~~~~~aG~~ai~vs~~~~a~~~G~pD~~~vt~~em~~~~~~I~~~---~~~PviaD------~d~Gy-g~~~~~~~~v~ 97 (290)
T 2hjp_A 28 AKLAEQAGFGGIWGSGFELSASYAVPDANILSMSTHLEMMRAIAST---VSIPLIAD------IDTGF-GNAVNVHYVVP 97 (290)
T ss_dssp HHHHHHHTCSEEEECHHHHHHHTTSCTTTCSCHHHHHHHHHHHHTT---CSSCEEEE------CTTTT-SSHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhc---CCCCEEEE------CCCCC-CCHHHHHHHHH
Confidence 3455568999888763 3332211111 235788888776655443 34555422 23332 27889999999
Q ss_pred HHHHCCcCEEEEcCCcC------------CCcHH-HHHHHHHHHHHhC--CCccEEEEeCCC-----cCcHHHHHHHHHH
Q 012949 311 ELHDMGCFEISLGDTIG------------VGTPG-TVVPMLEAVMAVV--PVEKLAVHLHDT-----YGQSLPNILISLQ 370 (452)
Q Consensus 311 ~l~~~Gad~I~L~DT~G------------~~~P~-~v~~li~~l~~~~--p~~~l~vH~Hnd-----~GlA~ANaLaAl~ 370 (452)
.+.++|+..|.|-|..+ .+.|. +..+.|+++++.. ++..|---.-.. .--++.-+.+-.+
T Consensus 98 ~l~~aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aRtda~~a~~g~~~ai~Ra~ay~e 177 (290)
T 2hjp_A 98 QYEAAGASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIARVEALIAGLGQQEAVRRGQAYEE 177 (290)
T ss_dssp HHHHHTCSEEEEECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTTTTTCCHHHHHHHHHHHHH
T ss_pred HHHHhCCeEEEEcCCCCCccccccccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHhhccccHHHHHHHHHHHHH
Confidence 99999999999999973 14444 5677788887763 332233333222 2346677778889
Q ss_pred cCCCEE
Q 012949 371 MGISTV 376 (452)
Q Consensus 371 aGa~~V 376 (452)
|||+.|
T Consensus 178 AGAd~i 183 (290)
T 2hjp_A 178 AGADAI 183 (290)
T ss_dssp TTCSEE
T ss_pred cCCcEE
Confidence 999955
No 414
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=80.44 E-value=21 Score=34.89 Aligned_cols=182 Identities=12% Similarity=0.109 Sum_probs=99.9
Q ss_pred CHHHHHHHHHHHHHC----CCCEEEEecCCC-CCcccc-cC--CHHHHHHHHHhcc-CCceeEEecchhhhhhhhhhhhh
Q 012949 146 PTGVKVELIRRLVSS----GLPVVEATSFVS-PKWVPQ-LA--DARDVMEAVRDLE-GARLPVLTPNLKVILQRSILFQQ 216 (452)
Q Consensus 146 ~~~~k~~i~~~L~~~----Gv~~IEvG~~~s-~~~~p~-~~--D~e~v~~~i~~~~-~~~l~~l~~~~~~~i~r~~~~~~ 216 (452)
+.++.+++++.|.++ |+..+=-++|-- |+-.|. +. .-++=++.+++.. ...+.+++--..
T Consensus 29 ~~~~~~e~A~~lk~~~~~~~~~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L~~~~~e~Glp~~tev~d----------- 97 (288)
T 3tml_A 29 SEQMTIDTAGRLKEICEKLNVPFIYKSSYDKANRSSGKSFRGLGMDEGLRILSEVKRQLGLPVLTDVHS----------- 97 (288)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCEEEECBC--------------CHHHHHHHHHHHHHHHCCCEEEECCS-----------
T ss_pred CHHHHHHHHHHHHHHHHHcCCCEEEecccccCCCCCCCCcCCcCHHHHHHHHHHHHHhcCCeEEEEeCC-----------
Confidence 788999999999876 887664443321 211110 10 1123334444321 223333331111
Q ss_pred ccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCC
Q 012949 217 CHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPV 296 (452)
Q Consensus 217 ~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~ 296 (452)
.+.++.+.+. ++.+.|... +.. | . ++++++-+.|.+|. ++.
T Consensus 98 -------------~~~v~~l~~~-vd~lkIgA~--~~~---n--------~----~LLr~~a~~gkPVi--lK~------ 138 (288)
T 3tml_A 98 -------------IDEIEQVASV-VDVLQTPAF--LCR---Q--------T----DFIHACARSGKPVN--IKK------ 138 (288)
T ss_dssp -------------GGGHHHHHHH-CSEEEECGG--GTT---C--------H----HHHHHHHTSSSCEE--EEC------
T ss_pred -------------HHHHHHHHHh-CCEEEECcc--ccc---C--------H----HHHHHHHccCCcEE--EeC------
Confidence 1366667777 888887642 110 0 1 23445557888876 332
Q ss_pred CCC-CCHHHHHHHHHHHHHCCc------CEEEEcCCcCCCcHH----HHHHHHHHHHHhCCCccEEE-EeCC--------
Q 012949 297 EGA-IPPSKVAYVAKELHDMGC------FEISLGDTIGVGTPG----TVVPMLEAVMAVVPVEKLAV-HLHD-------- 356 (452)
Q Consensus 297 ~~r-~d~e~l~~~a~~l~~~Ga------d~I~L~DT~G~~~P~----~v~~li~~l~~~~p~~~l~v-H~Hn-------- 356 (452)
+. .+++++...++.+.+.|. +.|.|+.-.-...+. .++. |..+++ + ..+|.+ +.|-
T Consensus 139 -G~~~t~~e~~~ave~i~~~Gn~~~~~~~~i~L~erg~~y~~~~~~vdl~~-i~~lk~-~-~~pV~~D~sHs~q~p~~~~ 214 (288)
T 3tml_A 139 -GQFLAPHDMKNVIDKARDAAREAGLSEDRFMACERGVSFGYNNLVSDMRS-LAIMRE-T-NAPVVFDATHSVQLPGGQG 214 (288)
T ss_dssp -CTTCCTTHHHHHHHHHHHHHHTTTCCSCCEEEEECCEECSSSCEECCHHH-HHHGGG-G-SSCEEEEHHHHTCCCC---
T ss_pred -CCCCCHHHHHHHHHHHHHcCCCccCCCCcEEEEeCCCCCCCCcCcCCHHH-HHHHHh-c-CCcEEEcCCcccccCCccc
Confidence 23 367788888888888887 767777632211122 2333 445665 5 457888 7774
Q ss_pred -----CcCcHHHHHHHHHHcCCC--EEeeccc
Q 012949 357 -----TYGQSLPNILISLQMGIS--TVDCSVA 381 (452)
Q Consensus 357 -----d~GlA~ANaLaAl~aGa~--~VD~Sv~ 381 (452)
++.+-..-+++|+.+||+ .|+.=..
T Consensus 215 ~~s~G~r~~v~~~a~AAvA~GadGl~iE~H~~ 246 (288)
T 3tml_A 215 TSSGGQREFVPVLARAAVATGVAGLFMETHPN 246 (288)
T ss_dssp -----CTTHHHHHHHHHHHHCCSEEEEEEESS
T ss_pred CCCCCchhhHHHHHHHHHHcCCCEEEEeeccC
Confidence 223347789999999999 7765443
No 415
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=80.36 E-value=23 Score=34.95 Aligned_cols=127 Identities=20% Similarity=0.154 Sum_probs=73.2
Q ss_pred hHHHHHHcCCCEEEEEec-CChHHHhhhcCCCHHHHHHHHHHHHHHHHhC-CCcEEEEEEeeecCCCCCCCCHHHHHHHH
Q 012949 232 GFEAAIAAGAKEVAIFAS-ASEAFSKSNINCSIEDSLVRYRAVAHAAKVL-SIPVRGYVSCVVGCPVEGAIPPSKVAYVA 309 (452)
Q Consensus 232 ~ie~a~~~Gi~~V~i~~s-~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~-G~~V~~~l~~~~g~p~~~r~d~e~l~~~a 309 (452)
..+..++.|++.|.|-.. .-+-........+.++-++++..+|+..++. ++.+. + |.. .+ +++
T Consensus 54 ~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~~vpIS------I---DT~--~~----~Va 118 (314)
T 3tr9_A 54 TAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRFPQLIS------V---DTS--RP----RVM 118 (314)
T ss_dssp HHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHCCSEEE------E---ECS--CH----HHH
T ss_pred HHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhCCCeEE------E---eCC--CH----HHH
Confidence 455667899999999852 2211000000124567788888999888764 65543 1 222 22 566
Q ss_pred HHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCc----------------HHHHHHHHHHcCC
Q 012949 310 KELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQ----------------SLPNILISLQMGI 373 (452)
Q Consensus 310 ~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~Gl----------------A~ANaLaAl~aGa 373 (452)
+++.++|++.|+ |-.|...| ++.++++.. ..| -+-.|...+... .....-.|.++|+
T Consensus 119 ~aAl~aGa~iIN--DVsg~~~~-~m~~v~a~~--g~~--vVlMh~~G~P~tmq~~~~ydvv~ev~~~l~~~i~~a~~~GI 191 (314)
T 3tr9_A 119 REAVNTGADMIN--DQRALQLD-DALTTVSAL--KTP--VCLMHFPSETRKPGSTTHFYFLQSVKKELQESIQRCKKAGI 191 (314)
T ss_dssp HHHHHHTCCEEE--ETTTTCST-THHHHHHHH--TCC--EEEECCCCTTCCTTSSCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCCEEE--ECCCCCch-HHHHHHHHh--CCe--EEEECCCCCCcccccccccchHHHHHHHHHHHHHHHHHcCC
Confidence 777778999664 77777655 444444432 133 355676544221 2234556788999
Q ss_pred C----EEeecc
Q 012949 374 S----TVDCSV 380 (452)
Q Consensus 374 ~----~VD~Sv 380 (452)
+ ++|-.+
T Consensus 192 ~~~~IilDPG~ 202 (314)
T 3tr9_A 192 SEDRIIIDPGF 202 (314)
T ss_dssp CGGGEEEECCC
T ss_pred CHhHEEEeCCC
Confidence 5 569854
No 416
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=80.20 E-value=5.7 Score=38.67 Aligned_cols=38 Identities=26% Similarity=0.526 Sum_probs=22.3
Q ss_pred HHcCCCEEeecccCCCCCCCCCCCCCcccHHHHHHHHH---cCCCC
Q 012949 369 LQMGISTVDCSVAGLGGCPYAKGASGNVATEDVVYMLS---GLGVE 411 (452)
Q Consensus 369 l~aGa~~VD~Sv~GlGecP~a~graGNaalE~vv~~L~---~~Gi~ 411 (452)
-+.|.. |.+.|.=..+||++ |-++.|.++..++ ..|.+
T Consensus 134 ~~~G~~-V~~~l~~~~~~e~~----~~~~~~~~~~~~~~~~~~G~d 174 (302)
T 2ftp_A 134 RQHQVR-VRGYISCVLGCPYD----GDVDPRQVAWVARELQQMGCY 174 (302)
T ss_dssp HHTTCE-EEEEEECTTCBTTT----BCCCHHHHHHHHHHHHHTTCS
T ss_pred HHCCCe-EEEEEEEEeeCCcC----CCCCHHHHHHHHHHHHHcCCC
Confidence 356654 56666555566764 3466666666665 46654
No 417
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=80.03 E-value=46 Score=32.36 Aligned_cols=121 Identities=12% Similarity=0.073 Sum_probs=74.3
Q ss_pred hHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCC-CCHHHHHHHHH
Q 012949 232 GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGA-IPPSKVAYVAK 310 (452)
Q Consensus 232 ~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r-~d~e~l~~~a~ 310 (452)
.++.+.+ .++.+.|... +.. + . ++++++-+.|.+|. ++. +. .+++.+...++
T Consensus 101 ~~~~l~~-~vd~~kIgA~--~~~---n--------~----~Ll~~~a~~~kPV~--lk~-------G~~~t~~ei~~Av~ 153 (292)
T 1o60_A 101 QCQPVAD-VVDIIQLPAF--LAR---Q--------T----DLVEAMAKTGAVIN--VKK-------PQFLSPSQMGNIVE 153 (292)
T ss_dssp GHHHHHT-TCSEEEECGG--GTT---C--------H----HHHHHHHHTTCEEE--EEC-------CTTSCGGGHHHHHH
T ss_pred HHHHHHh-cCCEEEECcc--ccc---C--------H----HHHHHHHcCCCcEE--EeC-------CCCCCHHHHHHHHH
Confidence 5666666 7888887642 110 0 1 23444446788876 332 22 36788888888
Q ss_pred HHHHCCcCEEEEcCCcCCCc-HH---HHHHHHHHHHHhCCCccEEE---Ee-----------CCCcCcHHHHHHHHHHcC
Q 012949 311 ELHDMGCFEISLGDTIGVGT-PG---TVVPMLEAVMAVVPVEKLAV---HL-----------HDTYGQSLPNILISLQMG 372 (452)
Q Consensus 311 ~l~~~Gad~I~L~DT~G~~~-P~---~v~~li~~l~~~~p~~~l~v---H~-----------Hnd~GlA~ANaLaAl~aG 372 (452)
.+...|.+.+.|+--.+... +. .+.. +..+++.++..+|.+ |. -....+...-+.+|+.+|
T Consensus 154 ~i~~~Gn~~i~L~~rg~~~~y~~~~~dl~~-i~~lk~~~~~~pV~~D~sH~~q~p~~~~~~~~g~~~~~~~ia~aAva~G 232 (292)
T 1o60_A 154 KIEECGNDKIILCDRGTNFGYDNLIVDMLG-FSVMKKASKGSPVIFDVTHSLQCRDPFGAASSGRRAQVTELARSGLAVG 232 (292)
T ss_dssp HHHHTTCCCEEEEECCEECSTTCEECCTTH-HHHHHHHTTSCCEEEEHHHHCC------------CTTHHHHHHHHHHHC
T ss_pred HHHHcCCCeEEEEECCCCCCCCccccCHHH-HHHHHhhCCCCCEEEECCCcccccCccccCCCCChhHHHHHHHHHHHcC
Confidence 88899987666665333211 11 3333 346788875568988 55 233444567778999999
Q ss_pred CC--EEeecc
Q 012949 373 IS--TVDCSV 380 (452)
Q Consensus 373 a~--~VD~Sv 380 (452)
|+ +|+.=+
T Consensus 233 a~Gl~IE~H~ 242 (292)
T 1o60_A 233 IAGLFLEAHP 242 (292)
T ss_dssp CSEEEEEEES
T ss_pred CCEEEEEecC
Confidence 99 887765
No 418
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=79.99 E-value=4.2 Score=38.18 Aligned_cols=70 Identities=10% Similarity=-0.007 Sum_probs=53.9
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEee
Q 012949 300 IPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDC 378 (452)
Q Consensus 300 ~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~ 378 (452)
.+++.+.++++++.+.|++.|.+-.. +| ...+.++.+++.+|...++.. +. +-.-..-.|+++||+.|+.
T Consensus 35 ~~~~~~~~~~~al~~gGv~~iel~~k----~~-~~~~~i~~l~~~~~~~~igag---tv-l~~d~~~~A~~aGAd~v~~ 104 (225)
T 1mxs_A 35 AREEDILPLADALAAGGIRTLEVTLR----SQ-HGLKAIQVLREQRPELCVGAG---TV-LDRSMFAAVEAAGAQFVVT 104 (225)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEEEESS----ST-HHHHHHHHHHHHCTTSEEEEE---CC-CSHHHHHHHHHHTCSSEEC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEecC----Cc-cHHHHHHHHHHhCcccEEeeC---eE-eeHHHHHHHHHCCCCEEEe
Confidence 36788889999999999999988764 34 345678888999987655443 33 4447889999999999974
No 419
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=79.97 E-value=28 Score=33.36 Aligned_cols=81 Identities=7% Similarity=-0.041 Sum_probs=49.4
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCc---EEEEEEeeecCCCCCC--CCH---
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIP---VRGYVSCVVGCPVEGA--IPP--- 302 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~---V~~~l~~~~g~p~~~r--~d~--- 302 (452)
+.++.+.++|.+.|.+.......+ ..+..-..+.++.+.+++.|++ +.. +. .+ .+.... .++
T Consensus 35 ~~l~~~~~~G~~~vEl~~~~~~~~-------~~~~~~~~~~~l~~~l~~~gL~~~~i~~-~~-~~-~~~~~l~~~d~~~r 104 (335)
T 2qw5_A 35 AHIKKLQRFGYSGFEFPIAPGLPE-------NYAQDLENYTNLRHYLDSEGLENVKIST-NV-GA-TRTFDPSSNYPEQR 104 (335)
T ss_dssp HHHHHHHHTTCCEEEEECCCCCGG-------GHHHHHHHHHHHHHHHHHTTCTTCEEEE-EC-CC-CSSSCTTCSSHHHH
T ss_pred HHHHHHHHhCCCEEEEecCCCccc-------ccccchHHHHHHHHHHHHCCCCcceeEE-Ee-cc-CCCCCCCCCCHHHH
Confidence 367889999999999986422111 0111123455667788899999 764 21 11 111111 122
Q ss_pred ----HHHHHHHHHHHHCCcCEEE
Q 012949 303 ----SKVAYVAKELHDMGCFEIS 321 (452)
Q Consensus 303 ----e~l~~~a~~l~~~Gad~I~ 321 (452)
+.+.+.++.+.++|++.|.
T Consensus 105 ~~~~~~~~~~i~~A~~lG~~~v~ 127 (335)
T 2qw5_A 105 QEALEYLKSRVDITAALGGEIMM 127 (335)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEe
Confidence 5677788889999999884
No 420
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=79.94 E-value=6.3 Score=38.91 Aligned_cols=115 Identities=14% Similarity=0.079 Sum_probs=76.6
Q ss_pred HHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHHHHHHCCcCEE-EEcCC-cCCCcHHHHHHHHHHHHHhCCC
Q 012949 270 YRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEI-SLGDT-IGVGTPGTVVPMLEAVMAVVPV 347 (452)
Q Consensus 270 ~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I-~L~DT-~G~~~P~~v~~li~~l~~~~p~ 347 (452)
..++.+.|++.|+-|-+ |. -.+.+.+..+++.+.+.+...| .+.-. ..+ .+..+...+..+.++++
T Consensus 15 ~~~ll~~A~~~~yAV~A-----fN-----v~n~e~~~Avl~AAee~~sPvIlq~s~g~~~y-~g~~~~~~~~~~A~~~~- 82 (306)
T 3pm6_A 15 ALPLLTFARTHSFAIPA-----IC-----VYNLEGILAIIRAAEHKRSPAMILLFPWAIQY-ADSLLVRTAASACRAAS- 82 (306)
T ss_dssp SHHHHHHHHHTTCCEEE-----EE-----CSSHHHHHHHHHHHHHTTCCEEEEECHHHHHH-HTTHHHHHHHHHHHHCS-
T ss_pred HHHHHHHHHHCCcEEEE-----Ee-----eCCHHHHHHHHHHHHHhCCCEEEEcChhHHhh-ccHHHHHHHHHHHHHCC-
Confidence 35677999999987752 31 2357888899999999987744 44321 111 12233444555555544
Q ss_pred ccEEEEeCCCcCcHHHHHHHHHHc--------CCC--EEeecccCCCCCCCCCCCCCc-ccHHHHHHHHHc
Q 012949 348 EKLAVHLHDTYGQSLPNILISLQM--------GIS--TVDCSVAGLGGCPYAKGASGN-VATEDVVYMLSG 407 (452)
Q Consensus 348 ~~l~vH~Hnd~GlA~ANaLaAl~a--------Ga~--~VD~Sv~GlGecP~a~graGN-aalE~vv~~L~~ 407 (452)
+||.+|. |-|.-......|+++ |.+ ++|+|-..+-+ | .-|.+++.+.+.
T Consensus 83 VPVaLHl--DHg~~~e~i~~ai~~~~~~~~~~GFtSVMiDgS~~p~eE---------Ni~~Tk~vv~~ah~ 142 (306)
T 3pm6_A 83 VPITLHL--DHAQDPEIIKRAADLSRSETHEPGFDSIMVDMSHFSKEE---------NLRLTRELVAYCNA 142 (306)
T ss_dssp SCEEEEE--EEECCHHHHHHHHHTC------CCCSEEEECCTTSCHHH---------HHHHHHHHHHHHHT
T ss_pred CCEEEEc--CCCCCHHHHHHHHHhhhhccCCCCCCEEEEeCCCCCHHH---------HHHHHHHHHHHHHH
Confidence 5777765 445556778999999 998 78999987776 5 556677777763
No 421
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=79.88 E-value=52 Score=32.86 Aligned_cols=127 Identities=13% Similarity=0.031 Sum_probs=72.8
Q ss_pred HcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHh-CCCcEEEEEEeeecCCCCCCCCHHHHHHHHHHHHHCC
Q 012949 238 AAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKV-LSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMG 316 (452)
Q Consensus 238 ~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~-~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~G 316 (452)
+.|+|.|.|-++.--......+..+. +.+.++++.+|+ ..++|.+-+. |+ .+.+.+.++++.+.++|
T Consensus 153 ~~g~d~ielNisCPn~~gg~~l~~~~----e~~~~il~av~~~~~~PV~vKi~-----p~---~d~~~~~~~a~~~~~~G 220 (354)
T 4ef8_A 153 TEKGVILELNLSCPNVPGKPQVAYDF----DAMRQCLTAVSEVYPHSFGVKMP-----PY---FDFAHFDAAAEILNEFP 220 (354)
T ss_dssp HHHCCEEEEECSSCCSTTSCCGGGSH----HHHHHHHHHHHHHCCSCEEEEEC-----CC---CSHHHHHHHHHHHHTCT
T ss_pred hcCCCEEEEeCCCCCCCCchhhccCH----HHHHHHHHHHHHhhCCCeEEEec-----CC---CCHHHHHHHHHHHHhCC
Confidence 46788777755421110011122222 334455555554 3567765443 33 35777888999999998
Q ss_pred -cCEEEEcCCcC---------------------CCcH----HHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHH
Q 012949 317 -CFEISLGDTIG---------------------VGTP----GTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQ 370 (452)
Q Consensus 317 -ad~I~L~DT~G---------------------~~~P----~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~ 370 (452)
+|.|.+-.|.| .++. ..-.++|+.+++..+.++|-.=.==.. ...++.++.
T Consensus 221 g~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~~~~ipII~~GGI~s---~~da~~~l~ 297 (354)
T 4ef8_A 221 KVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPGKLIFGCGGVYT---GEDAFLHVL 297 (354)
T ss_dssp TEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTTSEEEEESCCCS---HHHHHHHHH
T ss_pred CccEEEEecccCcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHhCCCCCEEEECCcCC---HHHHHHHHH
Confidence 99998755542 1111 344677888888766555543221111 256777888
Q ss_pred cCCCEEeec
Q 012949 371 MGISTVDCS 379 (452)
Q Consensus 371 aGa~~VD~S 379 (452)
+||+.|-..
T Consensus 298 aGAd~V~vg 306 (354)
T 4ef8_A 298 AGASMVQVG 306 (354)
T ss_dssp HTEEEEEEC
T ss_pred cCCCEEEEh
Confidence 999877643
No 422
>3vii_A Beta-glucosidase; cellulases, glycosyl hydrolase, hydrolase; HET: BTB; 0.97A {Neotermes koshunensis} PDB: 3ahz_A* 3vif_A* 3vih_A 3vig_A* 3vim_A* 3ai0_A* 3vin_A* 3vio_A* 3vip_A* 3vij_A* 3vik_A* 3vil_A*
Probab=79.82 E-value=3.9 Score=42.95 Aligned_cols=84 Identities=13% Similarity=0.058 Sum_probs=60.5
Q ss_pred cHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCC--------CCCC
Q 012949 229 YLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPV--------EGAI 300 (452)
Q Consensus 229 ~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~--------~~r~ 300 (452)
+++|++.+++.|++..|+.++=|-++-+-..+.=-++.|+-+.++|+.+++.|++..++|.. |..|. ..+-
T Consensus 68 y~EDi~Lm~elG~~~yRfSIsWsRI~P~G~~g~~N~~Gl~fY~~lId~Ll~~GIeP~VTL~H-~DlP~~L~~~GGW~nr~ 146 (487)
T 3vii_A 68 YKEDVKILKELGAQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYH-WDLPQALQDLGGWPNLV 146 (487)
T ss_dssp HHHHHHHHHHHTCSEEEEECCHHHHSTTSSTTCCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SCCBHHHHTTTSTTSTH
T ss_pred HHHHHHHHHHcCCCEEEeeCCHHHcCcCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEEec-CCCcHHHHHcCCCCCHH
Confidence 45799999999999999988655554332123335789999999999999999999999987 44553 1233
Q ss_pred CHHHHHHHHHHHH
Q 012949 301 PPSKVAYVAKELH 313 (452)
Q Consensus 301 d~e~l~~~a~~l~ 313 (452)
..+.++++|+.+.
T Consensus 147 ~v~~F~~YA~~~f 159 (487)
T 3vii_A 147 LAKYSENYARVLF 159 (487)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3455666666544
No 423
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=79.81 E-value=3.6 Score=37.14 Aligned_cols=68 Identities=9% Similarity=0.056 Sum_probs=49.9
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCC-CccEEEEeCCCcCcHHHHHHHHHHcCCCEE
Q 012949 300 IPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVP-VEKLAVHLHDTYGQSLPNILISLQMGISTV 376 (452)
Q Consensus 300 ~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p-~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~V 376 (452)
.+++...++++.+.+.|++.|.+.=. +| ...+.++.+|+.+| +..|++....| ...+..|+++|||+|
T Consensus 19 ~~~~~~~~~~~~~~~~G~~~iev~~~----~~-~~~~~i~~ir~~~~~~~~ig~~~v~~----~~~~~~a~~~Gad~i 87 (205)
T 1wa3_A 19 NSVEEAKEKALAVFEGGVHLIEITFT----VP-DADTVIKELSFLKEKGAIIGAGTVTS----VEQCRKAVESGAEFI 87 (205)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEETT----ST-THHHHHHHTHHHHHTTCEEEEESCCS----HHHHHHHHHHTCSEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCC----Ch-hHHHHHHHHHHHCCCCcEEEecccCC----HHHHHHHHHcCCCEE
Confidence 46889999999999999999977422 33 23456888888876 55677755223 245788899999999
No 424
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=79.75 E-value=20 Score=34.70 Aligned_cols=100 Identities=15% Similarity=0.109 Sum_probs=65.3
Q ss_pred hHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHHH
Q 012949 232 GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKE 311 (452)
Q Consensus 232 ~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~ 311 (452)
-++..++.|++.|-+.-+..|. .-.|.+|-.+-++.+++.++. .++|.+.+ +..+.+...++++.
T Consensus 26 lv~~li~~Gv~gi~v~GttGE~-----~~Ls~~Er~~v~~~~~~~~~g-rvpviaGv---------g~~~t~~ai~la~~ 90 (297)
T 2rfg_A 26 LVDWQIKHGAHGLVPVGTTGES-----PTLTEEEHKRVVALVAEQAQG-RVPVIAGA---------GSNNPVEAVRYAQH 90 (297)
T ss_dssp HHHHHHHTTCSEEECSSGGGTG-----GGSCHHHHHHHHHHHHHHHTT-SSCBEEEC---------CCSSHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECccccch-----hhCCHHHHHHHHHHHHHHhCC-CCeEEEcc---------CCCCHHHHHHHHHH
Confidence 6677788999988887766664 335677777666666666543 24443211 23456777888888
Q ss_pred HHHCCcCEEEEcC-CcCCCcHHHHHHHHHHHHHhCC
Q 012949 312 LHDMGCFEISLGD-TIGVGTPGTVVPMLEAVMAVVP 346 (452)
Q Consensus 312 l~~~Gad~I~L~D-T~G~~~P~~v~~li~~l~~~~p 346 (452)
+.++|+|.+-+.= ..--.+++.+.+.++.+.+..+
T Consensus 91 A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~ 126 (297)
T 2rfg_A 91 AQQAGADAVLCVAGYYNRPSQEGLYQHFKMVHDAID 126 (297)
T ss_dssp HHHHTCSEEEECCCTTTCCCHHHHHHHHHHHHHHCS
T ss_pred HHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 8888988665542 2223466778888888777654
No 425
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=79.75 E-value=16 Score=38.89 Aligned_cols=162 Identities=19% Similarity=0.173 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccC--CceeEEecchhhhhhhhhhhhhccchhhhhh
Q 012949 148 GVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEG--ARLPVLTPNLKVILQRSILFQQCHASVISSN 225 (452)
Q Consensus 148 ~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~--~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~ 225 (452)
++-.+-++.|.++|+|.|-+-.-.. ..+.+++.++.+.. ..+.+++-|.
T Consensus 280 ~d~~eR~~aLv~AGvD~iviD~ahG--------hs~~v~~~i~~ik~~~p~~~viaGNV--------------------- 330 (556)
T 4af0_A 280 PGDKDRLKLLAEAGLDVVVLDSSQG--------NSVYQIEFIKWIKQTYPKIDVIAGNV--------------------- 330 (556)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCSCC--------CSHHHHHHHHHHHHHCTTSEEEEEEE---------------------
T ss_pred ccHHHHHHHHHhcCCcEEEEecccc--------ccHHHHHHHHHHHhhCCcceEEeccc---------------------
Confidence 3456778899999999998854321 12344555543211 1233333332
Q ss_pred hhccHHhHHHHHHcCCCEEEEEecCChHH-HhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHH
Q 012949 226 LWVYLQGFEAAIAAGAKEVAIFASASEAF-SKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSK 304 (452)
Q Consensus 226 ~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~-~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~ 304 (452)
++.+..+.++++|+|.|.+-+..--+- -+...|..+. .+..+.++.++|++.|++|.+ |.+-..+.+
T Consensus 331 --aT~e~a~~Li~aGAD~vkVGiGpGSiCtTr~v~GvG~P-Q~tAi~~~a~~a~~~~vpvIA---------DGGI~~sGD 398 (556)
T 4af0_A 331 --VTREQAAQLIAAGADGLRIGMGSGSICITQEVMAVGRP-QGTAVYAVAEFASRFGIPCIA---------DGGIGNIGH 398 (556)
T ss_dssp --CSHHHHHHHHHHTCSEEEECSSCSTTBCCTTTCCSCCC-HHHHHHHHHHHHGGGTCCEEE---------ESCCCSHHH
T ss_pred --cCHHHHHHHHHcCCCEEeecCCCCcccccccccCCCCc-HHHHHHHHHHHHHHcCCCEEe---------cCCcCcchH
Confidence 234577888899999999976432211 1112233332 245566888999999998752 445333333
Q ss_pred HHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEE---EeCCCcCcHHHHHHH
Q 012949 305 VAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAV---HLHDTYGQSLPNILI 367 (452)
Q Consensus 305 l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~v---H~Hnd~GlA~ANaLa 367 (452)
++++ ..+|||.+.+.-. ++.- .+.|+..+.+ ...--+|||...++.
T Consensus 399 ---i~KA-laaGAd~VMlGsl------------lAGt-~EsPGe~~~~~G~~~K~YrGMgS~~Am~ 447 (556)
T 4af0_A 399 ---IAKA-LALGASAVMMGGL------------LAGT-TESPGEYFYHEGKRVKVYRGMGSIEAME 447 (556)
T ss_dssp ---HHHH-HHTTCSEEEESTT------------TTTB-TTSSSCCEEETTEEEEEEECTTSHHHHT
T ss_pred ---HHHH-hhcCCCEEEEchh------------hccc-cCCCCcEEEECCEEEEeecccccHHHHH
Confidence 4443 4589999998543 2221 3456643322 112238999655543
No 426
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=79.67 E-value=8.8 Score=35.53 Aligned_cols=173 Identities=13% Similarity=0.096 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEec-chhhhhhhhhhhhhccchhhhhhh
Q 012949 148 GVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTP-NLKVILQRSILFQQCHASVISSNL 226 (452)
Q Consensus 148 ~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~-~~~~~i~r~~~~~~~~~~~i~~~~ 226 (452)
.+-.++++.+.+.|++.|++.-..... .....+ .+.++.++ .. .+++++- +.+
T Consensus 30 ~~~~~~a~~~~~~Gad~i~v~d~~~~~-~~~~~~-~~~i~~i~-~~--~ipvi~~Ggi~--------------------- 83 (241)
T 1qo2_A 30 KDPVELVEKLIEEGFTLIHVVDLSNAI-ENSGEN-LPVLEKLS-EF--AEHIQIGGGIR--------------------- 83 (241)
T ss_dssp SCHHHHHHHHHHTTCCCEEEEEHHHHH-HCCCTT-HHHHHHGG-GG--GGGEEEESSCC---------------------
T ss_pred cCHHHHHHHHHHcCCCEEEEecccccc-cCCchh-HHHHHHHH-hc--CCcEEEECCCC---------------------
Confidence 356889999999999999985211100 000012 22333333 22 2233221 111
Q ss_pred hccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeec-CCCCC-C-CCHH
Q 012949 227 WVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVG-CPVEG-A-IPPS 303 (452)
Q Consensus 227 ~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g-~p~~~-r-~d~e 303 (452)
..++++.++++|++.|.+-.. .+++- +.++.+++.|-.+...+..-.| ....+ . .+..
T Consensus 84 --~~~~~~~~~~~Gad~V~lg~~----------------~l~~p-~~~~~~~~~g~~i~~~~d~~~~~v~~~g~~~~~~~ 144 (241)
T 1qo2_A 84 --SLDYAEKLRKLGYRRQIVSSK----------------VLEDP-SFLKSLREIDVEPVFSLDTRGGRVAFKGWLAEEEI 144 (241)
T ss_dssp --SHHHHHHHHHTTCCEEEECHH----------------HHHCT-THHHHHHTTTCEEEEEEEEETTEECCTTCSSCSCC
T ss_pred --CHHHHHHHHHCCCCEEEECch----------------HhhCh-HHHHHHHHcCCcEEEEEEecCCEEEECCceecCCC
Confidence 234788899999999876532 11111 1122225566334333332000 00011 0 0111
Q ss_pred HHHHHHHHHHHCCcCEEEEcCCc--CCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHH-HHHHHHHHc
Q 012949 304 KVAYVAKELHDMGCFEISLGDTI--GVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSL-PNILISLQM 371 (452)
Q Consensus 304 ~l~~~a~~l~~~Gad~I~L~DT~--G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~-ANaLaAl~a 371 (452)
...++++.+.++|++.|.+-++. |..... -.++++.+++.++ +|+-.- -|... .+....+++
T Consensus 145 ~~~e~~~~~~~~G~~~i~~t~~~~~g~~~g~-~~~~i~~l~~~~~-iPvia~----GGI~~~~d~~~~~~~ 209 (241)
T 1qo2_A 145 DPVSLLKRLKEYGLEEIVHTEIEKDGTLQEH-DFSLTKKIAIEAE-VKVLAA----GGISSENSLKTAQKV 209 (241)
T ss_dssp CHHHHHHHHHTTTCCEEEEEETTHHHHTCCC-CHHHHHHHHHHHT-CEEEEE----SSCCSHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCCEEEEEeecccccCCcC-CHHHHHHHHHhcC-CcEEEE----CCCCCHHHHHHHHhc
Confidence 23456777788999999997642 221111 1456666666543 234332 35553 667777777
No 427
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=79.53 E-value=34 Score=30.50 Aligned_cols=105 Identities=8% Similarity=0.034 Sum_probs=63.0
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 310 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~ 310 (452)
+.++.+.+.|++.|.+-.+. .+.++.++.++.+.+.++..+..+.. . +.++
T Consensus 30 ~~~~~~~~~G~~~i~l~~~~----------~~~~~~~~~~~~l~~~~~~~~v~v~v--~-----------------~~~~ 80 (215)
T 1xi3_A 30 ESVREALEGGATAIQMRIKN----------APTREMYEIGKTLRQLTREYDALFFV--D-----------------DRVD 80 (215)
T ss_dssp HHHHHHHHTTCSEEEECCCS----------CCHHHHHHHHHHHHHHHHHTTCEEEE--E-----------------SCHH
T ss_pred HHHHHHHHCCCCEEEECCCC----------CCHHHHHHHHHHHHHHHHHcCCeEEE--c-----------------ChHH
Confidence 47888899999999876531 23445556555555566666765542 0 1124
Q ss_pred HHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEee
Q 012949 311 ELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDC 378 (452)
Q Consensus 311 ~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~ 378 (452)
.+.++|++.|.+... ...+..+. .+. +...+++-+|+. ..+..+.+.|+++|=.
T Consensus 81 ~a~~~gad~v~l~~~--~~~~~~~~----~~~---~~~~~~v~~~t~-----~e~~~~~~~g~d~i~~ 134 (215)
T 1xi3_A 81 VALAVDADGVQLGPE--DMPIEVAK----EIA---PNLIIGASVYSL-----EEALEAEKKGADYLGA 134 (215)
T ss_dssp HHHHHTCSEEEECTT--SCCHHHHH----HHC---TTSEEEEEESSH-----HHHHHHHHHTCSEEEE
T ss_pred HHHHcCCCEEEECCc--cCCHHHHH----HhC---CCCEEEEecCCH-----HHHHHHHhcCCCEEEE
Confidence 566779999988632 12233332 222 344567666653 2345678899998854
No 428
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=79.53 E-value=39 Score=32.93 Aligned_cols=182 Identities=15% Similarity=0.076 Sum_probs=0.0
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCC--HHHHHHHHHhccC-CceeEEe---cchhhhhhhhhhhhhcc
Q 012949 145 VPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLAD--ARDVMEAVRDLEG-ARLPVLT---PNLKVILQRSILFQQCH 218 (452)
Q Consensus 145 ~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D--~e~v~~~i~~~~~-~~l~~l~---~~~~~~i~r~~~~~~~~ 218 (452)
...++-.++++.+.++|.|.|.+| |-. -+ .+.+.+.+..+.. ..++++. |...
T Consensus 50 ~~~~~~~~~~~~~~~sGtDai~VG---S~~-----vt~~~~~~~~~v~~ik~~~~lPvil~fPP~~g------------- 108 (286)
T 3vk5_A 50 VPVTEAVEKAAELTRLGFAAVLLA---STD-----YESFESHMEPYVAAVKAATPLPVVLHFPPRPG------------- 108 (286)
T ss_dssp SCHHHHHHHHHHHHHTTCSCEEEE---CSC-----CSSHHHHHHHHHHHHHHHCSSCEEEECCCBTT-------------
T ss_pred CCcHHHHHHHHHHHhcCCCEEEEc---cCC-----CCcchHHHHHHHHHHHHhCCCCEEEECCCCCC-------------
Q ss_pred chhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHH--HHHHHHHH----HhCCCcE--EEEEEe
Q 012949 219 ASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVR--YRAVAHAA----KVLSIPV--RGYVSC 290 (452)
Q Consensus 219 ~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~--~~~~v~~A----k~~G~~V--~~~l~~ 290 (452)
.. ..+..++|-+-+..=.|- .+....+.. -..++... |+.| ++ .+||-.
T Consensus 109 -------------~~-~~i~~~aDa~l~psvlNs--------~n~~~i~g~~~~~~aa~~v~~~~~~~g-e~ip~gYL~v 165 (286)
T 3vk5_A 109 -------------AG-FPVVRGADALLLPALLGS--------GDDYFVWKSFLETLAAFPGRIPREEWP-ELLLTVALTF 165 (286)
T ss_dssp -------------TB-SCCCTTCSEEEEEEETTB--------SSHHHHTHHHHHHHHHCSTTSCGGGCC-EEEEEEEEEC
T ss_pred -------------Cc-cccccCCCEEEEEEEecC--------CCcccccCcHHHHHHhHHHHHHHHHhC-CcceEEEEEE
Q ss_pred eec---------CCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCC-CccEEEEeCCCcCc
Q 012949 291 VVG---------CPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVP-VEKLAVHLHDTYGQ 360 (452)
Q Consensus 291 ~~g---------~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p-~~~l~vH~Hnd~Gl 360 (452)
--| .+.... +..++..++....++|.+.|+| |..+ -....++|+.+++.++ .++|.+= .|.
T Consensus 166 ~~g~k~V~fv~~~~~~~~-e~A~~~aYa~~gad~G~~lV~L-D~~~---~~v~~e~V~~I~~~~~~~iPV~vG----GGI 236 (286)
T 3vk5_A 166 GEDPRTGDLLGTVPVSTA-STEEIDRYLHVARAFGFHMVYL-YSRN---EHVPPEVVRHFRKGLGPDQVLFVS----GNV 236 (286)
T ss_dssp SCCHHHHHHHCBCCCCCS-SSHHHHHHHHHHHHTTCSEEEE-ECSS---SCCCHHHHHHHHHHSCTTCEEEEE----SSC
T ss_pred CCCCceeeeeCCCCCCCH-HHHHHHHHHHHHHHcCCCEEEE-cCCC---CcCCHHHHHHHHHhcCCCCCEEEE----eCC
Q ss_pred HHHHHHH-HHHcCCCEEeec
Q 012949 361 SLPNILI-SLQMGISTVDCS 379 (452)
Q Consensus 361 A~ANaLa-Al~aGa~~VD~S 379 (452)
-...... ++++||+.|-+.
T Consensus 237 rs~Eda~~ll~aGAD~VVVG 256 (286)
T 3vk5_A 237 RSGRQVTEYLDSGADYVGFA 256 (286)
T ss_dssp CSHHHHHHHHHTTCSEEEES
T ss_pred CCHHHHHHHHHcCCCEEEEC
No 429
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=79.47 E-value=20 Score=36.02 Aligned_cols=124 Identities=14% Similarity=0.027 Sum_probs=78.3
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecC--------------CCC---------------C----CCCH----
Q 012949 260 NCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGC--------------PVE---------------G----AIPP---- 302 (452)
Q Consensus 260 ~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~--------------p~~---------------~----r~d~---- 302 (452)
+...++.++..+++++.+++.|-++.+-|... |- |-+ . ..+.
T Consensus 79 gi~~d~~i~~~k~l~~avH~~G~~i~~QL~H~-Gr~~~~~~~~g~~~vapS~i~~~~~~~~~~g~~~~~~pr~mt~~eI~ 157 (361)
T 3gka_A 79 GIWSPEQVDGWRLVTDAVHAAGGRIFLQLWHV-GRVSDPVFLDGALPVAPSAIAPGGHVSLVRPQRPYVTPRALELDEIP 157 (361)
T ss_dssp BSSSHHHHHHHHHHHHHHHHTTCCEEEEEECC-TTSCCGGGTTTCCCEESSSCCCSSBCSSCSSCCBCCCCEECCGGGHH
T ss_pred ccCCHHHHHHHHHHHHHHHhcCCeEEEeeccC-CccccccccCCCCcccCCCCCCCCcccccccccCCCCCccCCHHHHH
Confidence 34456778889999999999999887777652 10 000 0 0111
Q ss_pred ---HHHHHHHHHHHHCCcCEEEEcCC-------------------cCCCc---HHHHHHHHHHHHHhCCCccEEEEeCCC
Q 012949 303 ---SKVAYVAKELHDMGCFEISLGDT-------------------IGVGT---PGTVVPMLEAVMAVVPVEKLAVHLHDT 357 (452)
Q Consensus 303 ---e~l~~~a~~l~~~Gad~I~L~DT-------------------~G~~~---P~~v~~li~~l~~~~p~~~l~vH~Hnd 357 (452)
+.+.+.|+.+.++|.|.|.|-=. .|... +.-+.++|+++++.++..+|.+-.+-+
T Consensus 158 ~ii~~f~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~~ 237 (361)
T 3gka_A 158 GVVAAFRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPR 237 (361)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTT
T ss_pred HHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEecccc
Confidence 24455677888999998888433 34321 234678999999998644788766542
Q ss_pred c---Cc--------HHHHHHHHHHcCCCEEeecccCCC
Q 012949 358 Y---GQ--------SLPNILISLQMGISTVDCSVAGLG 384 (452)
Q Consensus 358 ~---Gl--------A~ANaLaAl~aGa~~VD~Sv~GlG 384 (452)
- |+ ++.-+.+.-++|+++|+.+-...|
T Consensus 238 ~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~ 275 (361)
T 3gka_A 238 GDAHTMGDSDPAATFGHVARELGRRRIAFLFARESFGG 275 (361)
T ss_dssp CCSSSCCCSCHHHHHHHHHHHHHHTTCSEEEEECCCST
T ss_pred cccCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCCCC
Confidence 1 21 222333344689999999876533
No 430
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=79.47 E-value=16 Score=36.26 Aligned_cols=122 Identities=13% Similarity=0.169 Sum_probs=77.5
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecC-----------CCC------C----CCCH-------HHHHHHHHH
Q 012949 260 NCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGC-----------PVE------G----AIPP-------SKVAYVAKE 311 (452)
Q Consensus 260 ~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~-----------p~~------~----r~d~-------e~l~~~a~~ 311 (452)
+...++.++..+++++.+++.|-.+.+-|... |- |-+ . ..+. +.+.+.|+.
T Consensus 73 gi~~d~~i~~~~~~~~~vh~~G~~i~~QL~H~-Gr~~~~~g~~~~apS~i~~~~~~~~p~~mt~~eI~~ii~~f~~AA~~ 151 (343)
T 3kru_A 73 GIWNDEQVKELKKIVDICKANGAVMGIQLAHA-GRKCNISYEDVVGPSPIKAGDRYKLPRELSVEEIKSIVKAFGEAAKR 151 (343)
T ss_dssp BCSSHHHHHHHHHHHHHHHHTTCEEEEEEECC-GGGCCCTTSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHHHHHhcCCceEeeehhhc-cCccCcchhhccCCCcCCCCccccCchhcCHHHHHHHHHHHHHHHhh
Confidence 44456778889999999999999887777652 10 000 0 0122 244556777
Q ss_pred HHHCCcCEEEEc-------------------CCcCCCcH---HHHHHHHHHHHHhCC-CccEEEEeCCC----cCcHHHH
Q 012949 312 LHDMGCFEISLG-------------------DTIGVGTP---GTVVPMLEAVMAVVP-VEKLAVHLHDT----YGQSLPN 364 (452)
Q Consensus 312 l~~~Gad~I~L~-------------------DT~G~~~P---~~v~~li~~l~~~~p-~~~l~vH~Hnd----~GlA~AN 364 (452)
+.++|.|.|.|- |-.|...- .-+.++|+++++.++ +.+|.+-..-+ -|.-+..
T Consensus 152 a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~~~~~g~~~~~ 231 (343)
T 3kru_A 152 ANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDYMEGGINIDM 231 (343)
T ss_dssp HHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCCSSTTSCCHHH
T ss_pred ccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechhhhccCccHHH
Confidence 888999988875 66665433 346889999999986 44677755432 2333333
Q ss_pred HHH---HH-HcCCCEEeecccCC
Q 012949 365 ILI---SL-QMGISTVDCSVAGL 383 (452)
Q Consensus 365 aLa---Al-~aGa~~VD~Sv~Gl 383 (452)
++. .+ ++ +++|+.+..+.
T Consensus 232 ~~~~a~~l~~~-vd~i~vs~g~~ 253 (343)
T 3kru_A 232 MVEYINMIKDK-VDLIDVSSGGL 253 (343)
T ss_dssp HHHHHHHHTTT-CSEEEEECCCS
T ss_pred HHHHHHHhhcc-ccEEeccCCce
Confidence 222 22 45 99999986554
No 431
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=79.44 E-value=15 Score=38.15 Aligned_cols=107 Identities=14% Similarity=0.094 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHhC-CCcEEEEEEeeecCCCCCCCCHHHHHHHHHHHHHCCcCEE-EEc-CC----cCC--CcHHHHHHH
Q 012949 267 LVRYRAVAHAAKVL-SIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEI-SLG-DT----IGV--GTPGTVVPM 337 (452)
Q Consensus 267 l~~~~~~v~~Ak~~-G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I-~L~-DT----~G~--~~P~~v~~l 337 (452)
+..+.++++.+|+. ++-|. +|+ -.+++.+..+++.+.+.+...| ... .. .|+ ++|..+..+
T Consensus 5 l~~mkelL~~ak~g~~~gi~-----av~-----~~n~e~i~Ail~aAee~~sPVIIe~t~~qv~~~gGYtG~~p~~f~~~ 74 (450)
T 3txv_A 5 ENHLIDIARWSERPGPRGIP-----SIC-----SAHPLVIEAAMLRAHREKAPVLIEATCNQVNQDGGYTGMTPEDFTRF 74 (450)
T ss_dssp ----------------CCEE-----EEC-----CCCHHHHHHHHHHHHHSCSCEEEEEETTTSCTTCTTTTCCHHHHHHH
T ss_pred ccCHHHHHHHHHhCCCcEEE-----EeC-----cCCHHHHHHHHHHHHHhCCCEEEEcChhhHhhcCCCCCCCHHHHHHH
Confidence 34466778888872 23332 121 1468888889999999886644 333 22 233 468999999
Q ss_pred HHHHHHhC--CCccEEEEeCCCcC---------------cHHHHHHHHHHcCCC--EEeecccCCCC
Q 012949 338 LEAVMAVV--PVEKLAVHLHDTYG---------------QSLPNILISLQMGIS--TVDCSVAGLGG 385 (452)
Q Consensus 338 i~~l~~~~--p~~~l~vH~Hnd~G---------------lA~ANaLaAl~aGa~--~VD~Sv~GlGe 385 (452)
+..+.++. |..+|.+|. |-| .+......|+++|.+ ++|+|-..+++
T Consensus 75 V~~~A~~~~vPv~pV~Lhl--DHg~~~~w~~~~~~~am~~a~e~i~~aI~AGFtSVMiD~S~~p~ee 139 (450)
T 3txv_A 75 VGAIADRIEFPREKILLGG--DHLGPNPWKHLPADEAMAKAEAMITAYAKAGFTKLHLDTSMGCAGE 139 (450)
T ss_dssp HHHHHHHTTCCGGGEEEEE--EEESSGGGTTSCHHHHHHHHHHHHHHHHTTTCCEEEECCCBCCSSS
T ss_pred HHHHHHHcCcCcccEEEEC--CCCCCcccccccHHHHHHHHHHHHHHHHHcCCCEEEECCCCCchhh
Confidence 99888765 432466654 323 257788899999998 77999999988
No 432
>3no5_A Uncharacterized protein; PFAM DUF849 domain containing protein, structural genomics, center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha}
Probab=79.43 E-value=9.3 Score=37.06 Aligned_cols=126 Identities=13% Similarity=0.135 Sum_probs=81.5
Q ss_pred CCCHHHHHHHHHHHHHCCcCEEEE----cCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHH-HHcCC
Q 012949 299 AIPPSKVAYVAKELHDMGCFEISL----GDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILIS-LQMGI 373 (452)
Q Consensus 299 r~d~e~l~~~a~~l~~~Gad~I~L----~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaA-l~aGa 373 (452)
+.+|+.+++-+.++.++||..+-+ .|-.....|+.++++++.+|++.|++.|.+-..-..++. .-- +. ++..-
T Consensus 26 PvTpeEia~~A~~~~~AGAaivHlHvRd~~G~~s~d~~~~~e~~~~IR~~~pd~ii~~Ttg~~~~~~-e~R-~~~~~~~P 103 (275)
T 3no5_A 26 PITVSEQVESTQAAFEAGATLVHLHVRNDDETPTSNPDRFALVLEGIRKHAPGMITQVSTGGRSGAG-NER-GAMLSLRP 103 (275)
T ss_dssp CCSHHHHHHHHHHHHHHTCCEEEECEECTTSCEECCHHHHHHHHHHHHHHSTTCEEEECCCCCTTCC-GGG-GTTGGGCC
T ss_pred CCCHHHHHHHHHHHHHccCcEEEEeecCCCCCcCCCHHHHHHHHHHHHHhCCCeEEEeCCCCCCCCH-HHH-hhHhhcCC
Confidence 468899999999999999875544 554557789999999999999998876666544333321 000 11 22344
Q ss_pred CEEeecccC--CCCCCCCCCCCCcccHHHHHHHHHcCCCCCC---CChhhHHHHHHHHHHH
Q 012949 374 STVDCSVAG--LGGCPYAKGASGNVATEDVVYMLSGLGVETN---VDLRKLMLAGDFINKH 429 (452)
Q Consensus 374 ~~VD~Sv~G--lGecP~a~graGNaalE~vv~~L~~~Gi~t~---iDl~~L~~la~~v~~~ 429 (452)
++....++- +|+=.| ......+++++..+++.|+.+. +|...|..+..++.+=
T Consensus 104 e~aSl~~gs~Nf~~~v~---~N~~~~~~~~~~~~~e~Gi~pE~e~fd~g~l~~~~~l~~~G 161 (275)
T 3no5_A 104 DMASLATGSVNFPTRVY---DNPPELVDWLAAEMKTYGIKPEVEAFDLSMIFQAAAMQAAG 161 (275)
T ss_dssp SEEEEECSCEECSSSEE---CCCHHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHHHT
T ss_pred CEEEecCcccccccccc---cCCHHHHHHHHHHHHHcCCeeEEEEEcHHHHHHHHHHHHCC
Confidence 444333211 222000 1123568888888888888763 8889999888877763
No 433
>3chv_A Prokaryotic domain of unknown function (DUF849) W barrel fold; TIM barrel fold, structural genomics, joint center for struc genomics; HET: MSE; 1.45A {Silicibacter pomeroyi dss-3} PDB: 3fa5_A
Probab=79.35 E-value=6 Score=38.61 Aligned_cols=127 Identities=13% Similarity=0.092 Sum_probs=81.2
Q ss_pred CCCHHHHHHHHHHHHHCCcCEEEE----cCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCC
Q 012949 299 AIPPSKVAYVAKELHDMGCFEISL----GDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGIS 374 (452)
Q Consensus 299 r~d~e~l~~~a~~l~~~Gad~I~L----~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~ 374 (452)
+.+|+.+++-+.++.++||..+-+ .|-.....|+.++++++.+|+..|++.|.+-..-..+ ...-=++.++..-+
T Consensus 30 PvTpeEia~~A~~~~~AGAaivHlH~Rd~~G~ps~d~~~~~e~~~~IR~~~pd~ii~~TTgg~~~-~~eeR~~~~~~~Pe 108 (284)
T 3chv_A 30 PITVSEQVESTQEAFEAGAAIAHCHVRNDDGTPSSDPDRFARLTEGLHTHCPGMIVQFSTGGRSG-AGQARGGMLPLKPD 108 (284)
T ss_dssp CCSHHHHHHHHHHHHHHTCCEEEECEECTTSCEECCHHHHHHHHHHHHHHSTTCEEEECCCTTTC-CGGGGGTTGGGCCS
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEeeecCCCCCcCCCHHHHHHHHHHHHHhCCCeEEEeCCCCCCC-CHHHHHHhhhcCCC
Confidence 368899999999999999875544 4545677899999999999988888767766543211 11112222223444
Q ss_pred EEeecccCCCCCCCCCC--CCCcccHHHHHHHHHcCCCCCC---CChhhHHHHHHHHHHH
Q 012949 375 TVDCSVAGLGGCPYAKG--ASGNVATEDVVYMLSGLGVETN---VDLRKLMLAGDFINKH 429 (452)
Q Consensus 375 ~VD~Sv~GlGecP~a~g--raGNaalE~vv~~L~~~Gi~t~---iDl~~L~~la~~v~~~ 429 (452)
+.... +|..=|... ......+++++..+++.|+.+. +|...|..+..++++-
T Consensus 109 ~aSl~---~Gs~Nf~~~v~~n~~~~~~~~~~~~~e~Gv~pE~e~fd~g~l~~~~~l~~~G 165 (284)
T 3chv_A 109 MASLS---VGSNNFPSRVYENPPDLVDWLAAQMRSYRVTPEIEAFDLSHILRAIDMHGRG 165 (284)
T ss_dssp EEEEC---CSCEECSSSEECCCHHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHTT
T ss_pred EEEec---CcccccCCccccCCHHHHHHHHHHHHHcCCEEEEEEECHHHHHHHHHHHHcC
Confidence 43322 222001100 1223558888888888888753 8999999988777663
No 434
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=78.79 E-value=6.4 Score=37.04 Aligned_cols=110 Identities=16% Similarity=0.172 Sum_probs=62.7
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEe--ee---cCCCCCCCC----
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSC--VV---GCPVEGAIP---- 301 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~--~~---g~p~~~r~d---- 301 (452)
+.++.+.+.|.+.|.+...... . ..+.++.+.+++.|+++.. +.. -+ .....+ .+
T Consensus 45 ~~l~~~~~~G~~~vEl~~~~~~-------~-------~~~~~~~~~l~~~gl~~~~-~~~~~p~~~~~~~l~~-~d~~~r 108 (290)
T 2zvr_A 45 KGMELAKRVGYQAVEIAVRDPS-------I-------VDWNEVKILSEELNLPICA-IGTGQAYLADGLSLTH-PNDEIR 108 (290)
T ss_dssp HHHHHHHHHTCSEEEEECSCGG-------G-------SCHHHHHHHHHHHTCCEEE-EECTHHHHTTCCCTTC-SSHHHH
T ss_pred HHHHHHHHhCCCEEEEcCCCcc-------h-------hhHHHHHHHHHHcCCeEEE-EeccCccccCCCCCCC-CCHHHH
Confidence 3678888999999999864211 0 1233555677888999742 221 00 001111 12
Q ss_pred ---HHHHHHHHHHHHHCCcCEEEEcCCcCC----CcHHHHHHHHHHHH---HhCCCccEEEEeCCC
Q 012949 302 ---PSKVAYVAKELHDMGCFEISLGDTIGV----GTPGTVVPMLEAVM---AVVPVEKLAVHLHDT 357 (452)
Q Consensus 302 ---~e~l~~~a~~l~~~Gad~I~L~DT~G~----~~P~~v~~li~~l~---~~~p~~~l~vH~Hnd 357 (452)
.+.+.+.++.+.++|++.|... ..|. ........+++.++ +....+.|.+|.|+.
T Consensus 109 ~~~~~~~~~~i~~A~~lG~~~v~~~-~~g~~~~~~~~~~~~~~~~~l~~l~~~a~~v~l~lEn~~~ 173 (290)
T 2zvr_A 109 KKAIERVVKHTEVAGMFGALVIIGL-VRGRREGRSYEETEELFIESMKRLLELTEHAKFVIEPLNR 173 (290)
T ss_dssp HHHHHHHHHHHHHHHHHTCEEEESG-GGCCCTTSCHHHHHHHHHHHHHHHHHHCSSCCEEECCCCT
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEec-CCCCCCCcCHHHHHHHHHHHHHHHHHHhccCEEEEEeCCC
Confidence 3567778888889999988732 1233 22333334444443 333326789988863
No 435
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=78.66 E-value=8.6 Score=39.30 Aligned_cols=67 Identities=16% Similarity=0.115 Sum_probs=50.1
Q ss_pred HHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEeec
Q 012949 306 AYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCS 379 (452)
Q Consensus 306 ~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~S 379 (452)
.+.++.+.++|++.|.| ||. ...|..+.++|+.+++.++ +++.++.= ....-+..++++|||.|-+.
T Consensus 146 ~e~~~~lveaGvdvIvl-dta-~G~~~~~~e~I~~ik~~~~-i~Vi~g~V----~t~e~A~~a~~aGAD~I~vG 212 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVL-DSA-HGHSLNIIRTLKEIKSKMN-IDVIVGNV----VTEEATKELIENGADGIKVG 212 (400)
T ss_dssp CHHHHHHHHHTCSEEEE-CCS-CCSBHHHHHHHHHHHTTCC-CEEEEEEE----CSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEE-eCC-CCCcccHHHHHHHHHhcCC-CeEEEeec----CCHHHHHHHHHcCCCEEEEe
Confidence 46788889999999977 543 3368888999999999874 45655311 23567788999999999873
No 436
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=78.64 E-value=17 Score=34.78 Aligned_cols=127 Identities=17% Similarity=0.202 Sum_probs=70.6
Q ss_pred hHHHHHH-cCCCEEEEEecCChHHHh--hhcCCCHHHHHHHHHHHHHHHHhC-CCcEEEEEEeeecCCCCCCCCHHHHHH
Q 012949 232 GFEAAIA-AGAKEVAIFASASEAFSK--SNINCSIEDSLVRYRAVAHAAKVL-SIPVRGYVSCVVGCPVEGAIPPSKVAY 307 (452)
Q Consensus 232 ~ie~a~~-~Gi~~V~i~~s~Sd~~~~--~~~~~s~e~~l~~~~~~v~~Ak~~-G~~V~~~l~~~~g~p~~~r~d~e~l~~ 307 (452)
.++.+.+ +|+|.|.+-++. +...+ ..++.+. +.+.++++.+++. +++|.+-++ +.. ..+.+
T Consensus 116 ~a~~~~~~~g~d~iei~~~~-p~~~~g~~~~g~~~----~~~~eii~~v~~~~~~pv~vk~~-----~~~-----~~~~~ 180 (311)
T 1ep3_A 116 VCAKIGDAANVKAIELNISC-PNVKHGGQAFGTDP----EVAAALVKACKAVSKVPLYVKLS-----PNV-----TDIVP 180 (311)
T ss_dssp HHHHHTTSTTEEEEEEECCS-EEGGGTTEEGGGCH----HHHHHHHHHHHHHCSSCEEEEEC-----SCS-----SCSHH
T ss_pred HHHHHhccCCCCEEEEeCCC-CCCCCchhhhcCCH----HHHHHHHHHHHHhcCCCEEEEEC-----CCh-----HHHHH
Confidence 3444555 899977765431 11101 1122232 3344566666665 777764443 111 23446
Q ss_pred HHHHHHHCCcCEEEEcCCc-------------------CCCcH---HHHHHHHHHHHHhCCCccEEEEeCCCcCc-HHHH
Q 012949 308 VAKELHDMGCFEISLGDTI-------------------GVGTP---GTVVPMLEAVMAVVPVEKLAVHLHDTYGQ-SLPN 364 (452)
Q Consensus 308 ~a~~l~~~Gad~I~L~DT~-------------------G~~~P---~~v~~li~~l~~~~p~~~l~vH~Hnd~Gl-A~AN 364 (452)
+++.+.++|+|.|.+.++. |...| ....++++.+++.+. ++|-. .-|. -...
T Consensus 181 ~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~~-ipvia----~GGI~~~~d 255 (311)
T 1ep3_A 181 IAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDVD-IPIIG----MGGVANAQD 255 (311)
T ss_dssp HHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTCS-SCEEE----CSSCCSHHH
T ss_pred HHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhcC-CCEEE----ECCcCCHHH
Confidence 6788889999999996632 11112 123467788887653 34433 2344 2467
Q ss_pred HHHHHHcCCCEEee
Q 012949 365 ILISLQMGISTVDC 378 (452)
Q Consensus 365 aLaAl~aGa~~VD~ 378 (452)
+..++++||+.|-.
T Consensus 256 ~~~~l~~GAd~V~v 269 (311)
T 1ep3_A 256 VLEMYMAGASAVAV 269 (311)
T ss_dssp HHHHHHHTCSEEEE
T ss_pred HHHHHHcCCCEEEE
Confidence 78888899997743
No 437
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=78.63 E-value=9.1 Score=36.31 Aligned_cols=93 Identities=19% Similarity=0.233 Sum_probs=69.8
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 310 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~ 310 (452)
..+...++.|..-|.+|-=--. ..++.++.+++.|-+.|+.++ -.+-.|.+.+.++.+
T Consensus 149 tAiaml~dmG~~SvKffPm~Gl------------~~l~E~~avAka~a~~g~~lE----------PTGGIdl~N~~~I~~ 206 (249)
T 3m0z_A 149 TAIALLKDMGGSSIKYFPMGGL------------KHRAEFEAVAKACAAHDFWLE----------PTGGIDLENYSEILK 206 (249)
T ss_dssp HHHHHHHHTTCCEEEECCCTTT------------TTHHHHHHHHHHHHHTTCEEE----------EBSSCCTTTHHHHHH
T ss_pred HHHHHHHHcCCCeeeEeecCCc------------ccHHHHHHHHHHHHHcCceEC----------CCCCccHhhHHHHHH
Confidence 3566777899999998742111 246777788899999998332 345678899999999
Q ss_pred HHHHCCcCEEE-------EcCCcCCCcHHHHHHHHHHHHHhC
Q 012949 311 ELHDMGCFEIS-------LGDTIGVGTPGTVVPMLEAVMAVV 345 (452)
Q Consensus 311 ~l~~~Gad~I~-------L~DT~G~~~P~~v~~li~~l~~~~ 345 (452)
.+.++|+..|. |--..|.-.|++|++++..+++.+
T Consensus 207 i~l~aGv~~viPHIYssIIDk~TG~TrpedV~~ll~~~K~l~ 248 (249)
T 3m0z_A 207 IALDAGVSKIIPHIYSSIIDKASGNTRPADVRQLLEMTKQLV 248 (249)
T ss_dssp HHHHHTCSCBCCBCCGGGBCTTTCCBCHHHHHHHHHHHHHHC
T ss_pred HHHHcCCCeecccccceeccCCCCCCCHHHHHHHHHHHHHhh
Confidence 99999986442 334678999999999999998754
No 438
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=78.57 E-value=16 Score=35.17 Aligned_cols=98 Identities=9% Similarity=0.054 Sum_probs=65.9
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 310 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~ 310 (452)
+.++..++.|++.|-+.-+..|.+ -.|.+|-.+-++.+++.++ | |. .| .+..+.+...++++
T Consensus 24 ~lv~~li~~Gv~gl~v~GtTGE~~-----~Ls~eEr~~v~~~~~~~~~--g--Vi------aG---vg~~~t~~ai~la~ 85 (288)
T 2nuw_A 24 THAKNLLEKGIDAIFVNGTTGLGP-----ALSKDEKRQNLNALYDVTH--K--LI------FQ---VGSLNLNDVMELVK 85 (288)
T ss_dssp HHHHHHHHTTCCEEEETSTTTTGG-----GSCHHHHHHHHHHHTTTCS--C--EE------EE---CCCSCHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECccccChh-----hCCHHHHHHHHHHHHHHhC--C--eE------Ee---eCCCCHHHHHHHHH
Confidence 366777889999998887777753 3566666554444443322 2 32 11 13346688889999
Q ss_pred HHHHCCcCEEEEcCCc-CC-CcHHHHHHHHHHHHHhCC
Q 012949 311 ELHDMGCFEISLGDTI-GV-GTPGTVVPMLEAVMAVVP 346 (452)
Q Consensus 311 ~l~~~Gad~I~L~DT~-G~-~~P~~v~~li~~l~~~~p 346 (452)
.+.++|+|.+-+.=.. -- .+++.+.+.++.+.+..+
T Consensus 86 ~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~ 123 (288)
T 2nuw_A 86 FSNEMDILGVSSHSPYYFPRLPEKFLAKYYEEIARISS 123 (288)
T ss_dssp HHHTSCCSEEEECCCCSSCSCCHHHHHHHHHHHHHHCC
T ss_pred HHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcC
Confidence 9999999977665332 23 477889999999888764
No 439
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=78.54 E-value=28 Score=33.95 Aligned_cols=114 Identities=12% Similarity=0.094 Sum_probs=75.3
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 310 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~ 310 (452)
+-++..++.|++.|-+.-+..|. .-.|.+|-.+-++.+++.++. .++|.+.+ +. +.+...++++
T Consensus 37 ~lv~~li~~Gv~Gl~v~GtTGE~-----~~Ls~eEr~~v~~~~v~~~~g-rvpViaGv---------g~-~t~~ai~la~ 100 (316)
T 3e96_A 37 ETVDRIVDNGIDVIVPCGNTSEF-----YALSLEEAKEEVRRTVEYVHG-RALVVAGI---------GY-ATSTAIELGN 100 (316)
T ss_dssp HHHHHHHTTTCCEECTTSGGGTG-----GGSCHHHHHHHHHHHHHHHTT-SSEEEEEE---------CS-SHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEeCccccCc-----ccCCHHHHHHHHHHHHHHhCC-CCcEEEEe---------Cc-CHHHHHHHHH
Confidence 36677788999988887776664 345777777766666666543 34544221 22 5678888999
Q ss_pred HHHHCCcCEEEEc-CCcCCCcHHHHHHHHHHHHHhCCCccEEE-EeCCCcCcH
Q 012949 311 ELHDMGCFEISLG-DTIGVGTPGTVVPMLEAVMAVVPVEKLAV-HLHDTYGQS 361 (452)
Q Consensus 311 ~l~~~Gad~I~L~-DT~G~~~P~~v~~li~~l~~~~p~~~l~v-H~Hnd~GlA 361 (452)
.+.++|+|.+-+. =-.-..+++.+.+.++.+.+..+ .||-+ +...++...
T Consensus 101 ~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~-lPiilYn~g~~l~~~ 152 (316)
T 3e96_A 101 AAKAAGADAVMIHMPIHPYVTAGGVYAYFRDIIEALD-FPSLVYFKDPEISDR 152 (316)
T ss_dssp HHHHHTCSEEEECCCCCSCCCHHHHHHHHHHHHHHHT-SCEEEEECCTTSCTH
T ss_pred HHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCC-CCEEEEeCCCCCCHH
Confidence 9999999977764 23334477889999999888765 34443 433444443
No 440
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=78.49 E-value=41 Score=31.81 Aligned_cols=167 Identities=13% Similarity=0.074 Sum_probs=89.3
Q ss_pred HHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEe-cchhhhhhhhhhhhhccchhhhhhhhccH
Q 012949 152 ELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLT-PNLKVILQRSILFQQCHASVISSNLWVYL 230 (452)
Q Consensus 152 ~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~-~~~~~~i~r~~~~~~~~~~~i~~~~~~~~ 230 (452)
+.++.+.+.|.|.||+|.-.. ...+.+.+.++++....++++. |...
T Consensus 27 ~~l~~~~~~GtDaI~vGgs~g-------vt~~~~~~~v~~ik~~~~Piil~p~~~------------------------- 74 (235)
T 3w01_A 27 DDLDAICMSQTDAIMIGGTDD-------VTEDNVIHLMSKIRRYPLPLVLEISNI------------------------- 74 (235)
T ss_dssp HHHHHHHTSSCSEEEECCSSC-------CCHHHHHHHHHHHTTSCSCEEEECCCS-------------------------
T ss_pred HHHHHHHHcCCCEEEECCcCC-------cCHHHHHHHHHHhcCcCCCEEEecCCH-------------------------
Confidence 344557899999999996321 1234455555554434545432 3311
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCC-----cE--EEEEEeeecCCCCCCC---
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSI-----PV--RGYVSCVVGCPVEGAI--- 300 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~-----~V--~~~l~~~~g~p~~~r~--- 300 (452)
+.+ ..|+|-+-+..=.|.- + .+..+. ..++.+|+.|+ ++ .+||.. .|..+..
T Consensus 75 ~~~----~~gaD~il~pslln~~----~----~~~i~g---~~~~a~~~~gl~~~~~e~i~~gYivv---~p~s~v~~v~ 136 (235)
T 3w01_A 75 ESV----MPGFDFYFVPTVLNST----D----VAFHNG---TLLEALKTYGHSIDFEEVIFEGYVVC---NADSKVAKHT 136 (235)
T ss_dssp TTC----CTTCSEEEEEEETTBS----S----GGGTTH---HHHHHHHHHGGGCCGGGEEEEEEEEC---CSSSHHHHHT
T ss_pred HHh----hcCCCEEEEccccCCC----C----cchhhh---HHHHHHHHcCCCCcccceeeeeEEEE---CCCCChhhcc
Confidence 022 3488877765322220 0 111111 22234777888 65 466654 2333211
Q ss_pred ------CHHHHHHHHHHHH-HCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCC
Q 012949 301 ------PPSKVAYVAKELH-DMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGI 373 (452)
Q Consensus 301 ------d~e~l~~~a~~l~-~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa 373 (452)
+++.++..+..+. =+|-..||+.- .|.-- -.++|+.+++..++.++.+= +|....-....+..||
T Consensus 137 ~a~~~~~~e~iaa~A~~a~~~~g~~~vY~e~-sG~~g---~~~~v~~ir~~~~~~pv~vG----fGI~~~e~a~~~~~gA 208 (235)
T 3w01_A 137 KANTDLTTEDLEAYAQMVNHMYRLPVMYIEY-SGIYG---DVSKVQAVSEHLTETQLFYG----GGISSEQQATEMAAIA 208 (235)
T ss_dssp TBCCCCCHHHHHHHHHHHHHTTCCSEEEEEC-TTSCC---CHHHHHHHHTTCSSSEEEEE----SCCCSHHHHHHHHTTS
T ss_pred cCCcCCCHHHHHHHHHHHHHHcCCCEEEEec-CCCcC---CHHHHHHHHHhcCCCCEEEE----CCcCCHHHHHHHHcCC
Confidence 4667777766333 34778888855 77633 47788888887744455442 2333344444455588
Q ss_pred CEE
Q 012949 374 STV 376 (452)
Q Consensus 374 ~~V 376 (452)
|.|
T Consensus 209 D~V 211 (235)
T 3w01_A 209 DTI 211 (235)
T ss_dssp SEE
T ss_pred CEE
Confidence 855
No 441
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ...
Probab=78.47 E-value=55 Score=34.80 Aligned_cols=227 Identities=12% Similarity=0.062 Sum_probs=119.3
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhc-cCCceeEEecchhhhhhhhhhhhhccchhhh
Q 012949 145 VPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDL-EGARLPVLTPNLKVILQRSILFQQCHASVIS 223 (452)
Q Consensus 145 ~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~-~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~ 223 (452)
++..++..| +...+.|+|.|-+.|-.++ .|..++.+.+... ..+.+.+.+-+..
T Consensus 240 lTekD~~dl-~f~~~~~vD~ia~SfVr~a------~Dv~~~r~~L~~~g~~i~IIAKIE~~e------------------ 294 (550)
T 3gr4_A 240 VSEKDIQDL-KFGVEQDVDMVFASFIRKA------SDVHEVRKVLGEKGKNIKIISKIENHE------------------ 294 (550)
T ss_dssp SCHHHHHHH-HHHHHTTCSEEEETTCCSH------HHHHHHHHHHTTTTTTSEEEEEECSHH------------------
T ss_pred CCHHHHHHH-HHHHHcCCCEEEecCCCCH------HHHHHHHHHHHhcCCCceEEEEeCCHH------------------
Confidence 556666555 5777899999998653221 1223333333322 1233333332221
Q ss_pred hhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCC-CCCCCCH
Q 012949 224 SNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCP-VEGAIPP 302 (452)
Q Consensus 224 ~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p-~~~r~d~ 302 (452)
-++.++..++. .|.|.|. -.|.-.+. ..++....-+++++.|+++|.+|.+.-.+ .-+. ...+.+.
T Consensus 295 -----av~nldeIl~~-sDgImVa--RGDLgvei----~~e~vp~~Qk~iI~~c~~agkpVi~ATQM-LeSMi~~p~PTR 361 (550)
T 3gr4_A 295 -----GVRRFDEILEA-SDGIMVA--RGDLGIEI----PAEKVFLAQKMMIGRCNRAGKPVICATQM-LESMIKKPRPTR 361 (550)
T ss_dssp -----HHHTHHHHHHH-SSEEEEE--HHHHHHHS----CGGGHHHHHHHHHHHHHHHTCCEEEESST-TGGGGTCSSCCH
T ss_pred -----HHHHHHHHHHh-CCEEEEc--cchhcccC----CHHHHHHHHHHHHHHHHHhCCCEEEEehh-hHHhhcCCCccH
Confidence 11244444444 5766654 23432221 23445555578899999999987521110 1000 1123456
Q ss_pred HHHHHHHHHHHHCCcCEEEEc-CCcCCCcHHHHHHHHHHHHHhC---CCccEEE-------EeCCCc--CcHHHHHHHHH
Q 012949 303 SKVAYVAKELHDMGCFEISLG-DTIGVGTPGTVVPMLEAVMAVV---PVEKLAV-------HLHDTY--GQSLPNILISL 369 (452)
Q Consensus 303 e~l~~~a~~l~~~Gad~I~L~-DT~G~~~P~~v~~li~~l~~~~---p~~~l~v-------H~Hnd~--GlA~ANaLaAl 369 (452)
.++.+++.+..+ |+|.|.|. .|.-.-.|-+..+++..+..+. ..-.-.+ +...+. -.|.|...+|.
T Consensus 362 AEvsDVanAvld-G~DavMLSgETA~G~yPveaV~~M~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~ 440 (550)
T 3gr4_A 362 AEGSDVANAVLD-GADCIMLSGETAKGDYPLEAVRMQHLIAREAEAAIYHLQLFEELRRLAPITSDPTEATAVGAVEASF 440 (550)
T ss_dssp HHHHHHHHHHHH-TCSEEEESHHHHTCSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc-CCcEEEEecCccCCCCHHHHHHHHHHHHHHHhhcchhHHHHHhhhhccCCCCChHHHHHHHHHHHHH
Confidence 788888888776 89999994 5666678988777777666432 1100000 011121 23344455566
Q ss_pred HcCCC-EEeecccCCC-----C-CCCCCCCCCcccHHHHHHHHHcC-CCC
Q 012949 370 QMGIS-TVDCSVAGLG-----G-CPYAKGASGNVATEDVVYMLSGL-GVE 411 (452)
Q Consensus 370 ~aGa~-~VD~Sv~GlG-----e-cP~a~graGNaalE~vv~~L~~~-Gi~ 411 (452)
..+|. +|-.|-.|-- . .|-+|- -..++-+.+...|.-+ |+.
T Consensus 441 ~l~a~aIv~~T~SG~TA~~iSr~RP~~PI-ia~T~~~~~aR~l~L~~GV~ 489 (550)
T 3gr4_A 441 KCCSGAIIVLTKSGRSAHQVARYRPRAPI-IAVTRNPQTARQAHLYRGIF 489 (550)
T ss_dssp HTTCSCEEEECSSSHHHHHHHTTCCSSCE-EEEESCHHHHHHGGGSTTEE
T ss_pred hcCCCEEEEECCCcHHHHHHHhhCCCCCE-EEEcCCHHHHHHHhccCCeE
Confidence 78887 6667777631 1 121211 1234557777777653 654
No 442
>3lot_A Uncharacterized protein; protein of unknown function, structural genomics, joint CENT structural genomics, JCSG; HET: MSE; 1.89A {Archaeoglobus fulgidus}
Probab=78.41 E-value=14 Score=36.61 Aligned_cols=129 Identities=6% Similarity=0.017 Sum_probs=81.7
Q ss_pred CCCHHHHHHHHHHHHHCCcCEEEE----c-CCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCc--HHHHHHHHH-H
Q 012949 299 AIPPSKVAYVAKELHDMGCFEISL----G-DTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQ--SLPNILISL-Q 370 (452)
Q Consensus 299 r~d~e~l~~~a~~l~~~Gad~I~L----~-DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~Gl--A~ANaLaAl-~ 370 (452)
+.+|+.+++-+.++.++||..+-| + |-.....|+.+++++..+|++ +++.|.+-.-...++ ...--++.+ +
T Consensus 28 PvTpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~y~e~i~~IR~~-~d~iI~~TTgg~~~~~~~~eeR~~~~~~ 106 (314)
T 3lot_A 28 PVTPDQIVEEAVKAAEAGAGMVHIHARDPKDGRPTTDVEVFRYICREIKKQ-SDVVINVTTGGGGTLGIPVEERAKVVPA 106 (314)
T ss_dssp CCSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHHHHHHHHHHH-CCCEEEECSSTTGGGTCCHHHHTTHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeecCCCCCCcCCCHHHHHHHHHHHHhc-CCeEEEeCCCCcCCCCCCHHHHHHHHHh
Confidence 468899999999999999876554 2 455678899999999999987 565566655544444 444444544 3
Q ss_pred cCCCEEeeccc--CCCCCCCC---------------C---C---CCCcccHHHHHHHHHcCCCCC---CCChhhHHHHHH
Q 012949 371 MGISTVDCSVA--GLGGCPYA---------------K---G---ASGNVATEDVVYMLSGLGVET---NVDLRKLMLAGD 424 (452)
Q Consensus 371 aGa~~VD~Sv~--GlGecP~a---------------~---g---raGNaalE~vv~~L~~~Gi~t---~iDl~~L~~la~ 424 (452)
..-++....++ -+|.-|++ . . ..-...++.++..++..|+.+ -+|...|..+..
T Consensus 107 ~~Pe~aSln~Gs~Nf~~~~~~~~~~~~~~~~e~~~~~~~~~~v~~N~~~~i~~~~~~~~e~Gi~pE~e~fd~g~l~~~~~ 186 (314)
T 3lot_A 107 LKPEIATFNMGSMNFAIHPLLKKYKEFKYDWEPEYLEMTRDIVFRNTFKDLEALSRIFKENDTKPELECYDIGQIYNTAF 186 (314)
T ss_dssp HCCSEEEEECCCEECBCTTHHHHCCCCSSTHHHHHHHHGGGCEECCCHHHHHHHHHHHHHHTCEEEEEECSHHHHHHHHH
T ss_pred cCCceeeecCCCcccccccccccccccccccchhhcccCCCceecCCHHHHHHHHHHHHHcCCEEEEEEECHHHHHHHHH
Confidence 35555433322 22211100 0 0 011234677777777778875 389999999888
Q ss_pred HHHH
Q 012949 425 FINK 428 (452)
Q Consensus 425 ~v~~ 428 (452)
++.+
T Consensus 187 l~~~ 190 (314)
T 3lot_A 187 MFHE 190 (314)
T ss_dssp HHHT
T ss_pred HHHC
Confidence 7776
No 443
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=78.27 E-value=26 Score=33.08 Aligned_cols=111 Identities=10% Similarity=0.052 Sum_probs=64.3
Q ss_pred HHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeec--CCCCCCCC-------HH
Q 012949 233 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVG--CPVEGAIP-------PS 303 (452)
Q Consensus 233 ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g--~p~~~r~d-------~e 303 (452)
++.+.+.|++.|-+.... . .... + ..+.++.+.+++.|+++.. .. .+. ....+ .+ .+
T Consensus 42 l~~~~~~G~~~vEl~~~~--~-----~~~~-~---~~~~~l~~~l~~~gl~i~~-~~-~~~~~~~l~~-~d~~~r~~~~~ 107 (309)
T 2hk0_A 42 IEKVAKLGFDIIEVAAHH--I-----NEYS-D---AELATIRKSAKDNGIILTA-GI-GPSKTKNLSS-EDAAVRAAGKA 107 (309)
T ss_dssp HHHHHHTTCSEEEEEHHH--H-----TTSC-H---HHHHHHHHHHHHTTCEEEE-EC-CCCSSSCSSC-SCHHHHHHHHH
T ss_pred HHHHHHhCCCEEEeccCC--c-----cccc-h---hhHHHHHHHHHHcCCeEEE-ec-CCCCCCCCCC-CCHHHHHHHHH
Confidence 889999999999998531 0 0111 1 3445667788899999875 21 111 01111 12 25
Q ss_pred HHHHHHHHHHHCCcCEEEEc--CCcCCC------cHHHHHHHHHHHHHh---C--CCccEEEEeCCC
Q 012949 304 KVAYVAKELHDMGCFEISLG--DTIGVG------TPGTVVPMLEAVMAV---V--PVEKLAVHLHDT 357 (452)
Q Consensus 304 ~l~~~a~~l~~~Gad~I~L~--DT~G~~------~P~~v~~li~~l~~~---~--p~~~l~vH~Hnd 357 (452)
.+.+.++.+.++|++.|... +..|.. .......+++.+++. . -++.|.+|.|+.
T Consensus 108 ~~~~~i~~A~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~ 174 (309)
T 2hk0_A 108 FFERTLSNVAKLDIHTIGGALHSYWPIDYSQPVDKAGDYARGVEGINGIADFANDLGINLCIEVLNR 174 (309)
T ss_dssp HHHHHHHHHHHTTCCEEEECTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCT
T ss_pred HHHHHHHHHHHcCCCEEEeeccccccccCCCcCChHHHHHHHHHHHHHHHHHHHHcCCEEEEeeccc
Confidence 67778888899999988753 112432 223333333333322 1 246899999974
No 444
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=78.19 E-value=9.8 Score=38.25 Aligned_cols=95 Identities=13% Similarity=0.019 Sum_probs=56.3
Q ss_pred HHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCC---cCCCcHHHHHHHHHHHHHhCCC
Q 012949 271 RAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDT---IGVGTPGTVVPMLEAVMAVVPV 347 (452)
Q Consensus 271 ~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~DT---~G~~~P~~v~~li~~l~~~~p~ 347 (452)
.+.++.+++.|+.+.+.+. + ....+.++.+.++|++.|.+--. .+...|....+-+..+++.++
T Consensus 145 ~~~i~~~~~~g~~v~~~v~-----~-------~~~~e~a~~~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~~~~- 211 (393)
T 2qr6_A 145 SERIAQVRDSGEIVAVRVS-----P-------QNVREIAPIVIKAGADLLVIQGTLISAEHVNTGGEALNLKEFIGSLD- 211 (393)
T ss_dssp HHHHHHHHHTTSCCEEEEC-----T-------TTHHHHHHHHHHTTCSEEEEECSSCCSSCCCC-----CHHHHHHHCS-
T ss_pred HHHHHHHhhcCCeEEEEeC-----C-------ccHHHHHHHHHHCCCCEEEEeCCccccccCCCcccHHHHHHHHHhcC-
Confidence 4566788888988764332 1 12244566777889998876321 113334212223567777764
Q ss_pred ccEEEEeCCCcCcHHHHHHHHHHcCCCEEeecccC
Q 012949 348 EKLAVHLHDTYGQSLPNILISLQMGISTVDCSVAG 382 (452)
Q Consensus 348 ~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~Sv~G 382 (452)
+||.+- ..+...-+..++++||+.|.++.+|
T Consensus 212 ~pvi~g----gi~t~e~a~~~~~~Gad~i~vg~Gg 242 (393)
T 2qr6_A 212 VPVIAG----GVNDYTTALHMMRTGAVGIIVGGGE 242 (393)
T ss_dssp SCEEEE----CCCSHHHHHHHHTTTCSEEEESCCS
T ss_pred CCEEEC----CcCCHHHHHHHHHcCCCEEEECCCc
Confidence 466662 2344567888999999999995433
No 445
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=78.19 E-value=30 Score=32.64 Aligned_cols=113 Identities=16% Similarity=0.118 Sum_probs=72.0
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhc-CCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNI-NCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVA 309 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~-~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a 309 (452)
+.++++++.|++.|.+=....+. +..+ ..+.++.++.+.++.+.+++.|..+.+ ..+ - ++
T Consensus 47 ~~~~~al~~Gv~~vqlR~K~~~~--~~~~~~l~~~~~~~~a~~l~~l~~~~~~~liI----------nd~---~---~l- 107 (243)
T 3o63_A 47 QFAEAALAGGVDIIQLRDKGSPG--ELRFGPLQARDELAACEILADAAHRYGALFAV----------NDR---A---DI- 107 (243)
T ss_dssp HHHHHHHHTTCSEEEECCTTCHH--HHHHCSCCHHHHHHHHHHHHHHHHHTTCEEEE----------ESC---H---HH-
T ss_pred HHHHHHHHCCCCEEEEccCCCCc--cccccCCCHHHHHHHHHHHHHHHHhhCCEEEE----------eCH---H---HH-
Confidence 47788999999999986543220 0000 034567778888888999999977541 111 1 22
Q ss_pred HHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhC-CCccEEEEeCCCcCcHHHHHHHHHHcCCCEEee
Q 012949 310 KELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVV-PVEKLAVHLHDTYGQSLPNILISLQMGISTVDC 378 (452)
Q Consensus 310 ~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~-p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~ 378 (452)
+.++|+|.|-|.... +.+.. +++.+ ++..|++=+|+- .-+..|.+.|+|+|=.
T Consensus 108 --A~~~gAdGVHLg~~d--l~~~~-------~r~~~~~~~~iG~S~ht~-----~Ea~~A~~~GaDyI~v 161 (243)
T 3o63_A 108 --ARAAGADVLHLGQRD--LPVNV-------ARQILAPDTLIGRSTHDP-----DQVAAAAAGDADYFCV 161 (243)
T ss_dssp --HHHHTCSEEEECTTS--SCHHH-------HHHHSCTTCEEEEEECSH-----HHHHHHHHSSCSEEEE
T ss_pred --HHHhCCCEEEecCCc--CCHHH-------HHHhhCCCCEEEEeCCCH-----HHHHHHhhCCCCEEEE
Confidence 345699998887542 23333 33333 455688888873 4567788899999864
No 446
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=77.89 E-value=12 Score=34.12 Aligned_cols=103 Identities=13% Similarity=-0.010 Sum_probs=59.5
Q ss_pred hHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHHH
Q 012949 232 GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKE 311 (452)
Q Consensus 232 ~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~ 311 (452)
+++.+.+.|++.|++-.. +.+.++. .+.++..++.+.+.. .++ + . +.++.
T Consensus 34 ~~~~~~~~G~~~v~lr~~----------~~~~~~~----~~~~~~l~~~~~~~~-~l~--v----~---------~~~~~ 83 (221)
T 1yad_A 34 RIIITIQNEVDFIHIRER----------SKSAADI----LKLLDLIFEGGIDKR-KLV--M----N---------GRVDI 83 (221)
T ss_dssp HHHHHHGGGCSEEEECCT----------TSCHHHH----HHHHHHHHHTTCCGG-GEE--E----E---------SCHHH
T ss_pred HHHHHHHCCCCEEEEccC----------CCCHHHH----HHHHHHHHHhcCcCC-eEE--E----e---------ChHHH
Confidence 577888999998776321 1233333 344455555543311 111 1 0 11255
Q ss_pred HHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEee
Q 012949 312 LHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDC 378 (452)
Q Consensus 312 l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~ 378 (452)
+.++|+|.|.+.... ..+..+ ++..++..+++-+|+ ...+..|.++|+|+|-.
T Consensus 84 a~~~gad~v~l~~~~--~~~~~~-------~~~~~~~~ig~sv~t-----~~~~~~a~~~gaD~i~~ 136 (221)
T 1yad_A 84 ALFSTIHRVQLPSGS--FSPKQI-------RARFPHLHIGRSVHS-----LEEAVQAEKEDADYVLF 136 (221)
T ss_dssp HHTTTCCEEEECTTS--CCHHHH-------HHHCTTCEEEEEECS-----HHHHHHHHHTTCSEEEE
T ss_pred HHHcCCCEEEeCCCc--cCHHHH-------HHHCCCCEEEEEcCC-----HHHHHHHHhCCCCEEEE
Confidence 678899999996532 233333 333345567777774 45678888999998844
No 447
>3bld_A Queuine tRNA-ribosyltransferase; TGT, PREQ1, glycosyltransferase, metal-binding, queuosine biosynthesis, tRNA processing; HET: PRF; 1.19A {Zymomonas mobilis} PDB: 3bl3_A* 1ozq_A* 1ozm_A* 1r5y_A* 1enu_A* 1f3e_A* 1k4h_A* 1n2v_A* 1p0b_A* 1p0d_A 1p0e_A* 1pud_A 1q2r_A* 1q2s_A* 1q4w_A* 1q63_A* 1q65_A* 1q66_A* 1k4g_A* 1s38_A* ...
Probab=77.85 E-value=40 Score=34.19 Aligned_cols=130 Identities=18% Similarity=0.221 Sum_probs=78.4
Q ss_pred HHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhC-----C-------CcEEEEEEeeecCCCCCCCCHHH
Q 012949 237 IAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVL-----S-------IPVRGYVSCVVGCPVEGAIPPSK 304 (452)
Q Consensus 237 ~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~-----G-------~~V~~~l~~~~g~p~~~r~d~e~ 304 (452)
...|.|.+..++-..+ ...+++++-+.+.+..+++++. + ..+.+ +..+-..++-
T Consensus 145 ~~lg~DI~m~lDe~~~------~~~~~~~~~~sv~rT~rW~~r~~~~~~~~~~~~~~~~lfg--------iVQGg~~~dL 210 (386)
T 3bld_A 145 HLLGSDIVMAFDECTP------YPATPSRAASSMERSMRWAKRSRDAFDSRKEQAENAALFG--------IQQGSVFENL 210 (386)
T ss_dssp HHHTCSEEECCCCCCC------SSCCHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHCEEEE--------EECCTTCHHH
T ss_pred HHhCCCEEEecCcCCC------CCCCHHHHHHHHHHHHHHHHHHHHHhhccCcccccccEEE--------EEcCCCCHHH
Confidence 3568898877653322 2345555555555555554421 1 11221 2334456666
Q ss_pred HHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCC-ccEEEEeCCCcCcH-HHHHHHHHHcCCCEEeecccC
Q 012949 305 VAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPV-EKLAVHLHDTYGQS-LPNILISLQMGISTVDCSVAG 382 (452)
Q Consensus 305 l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~-~~l~vH~Hnd~GlA-~ANaLaAl~aGa~~VD~Sv~G 382 (452)
-.+-++.+.+.+.+.+.|.--...-..+.+.+++..+...+|. .|. |. +|.+ ..+.+.++..|+|.+|.+.--
T Consensus 211 R~~sa~~l~~~~~~GyaIGGlsvge~~~~~~~~l~~~~~~LP~~kPR--yl---mGvg~P~~il~~V~~GvDmFDcv~pt 285 (386)
T 3bld_A 211 RQQSADALAEIGFDGYAVGGLAGGEGQDEMFRVLDFSVPMLPDDKPH--YL---MGVGKPDDIVGAVERGIDMFDCVLPT 285 (386)
T ss_dssp HHHHHHHHHHHCCSEEEECSCSSSSCHHHHHHHHHHHGGGSCTTSCE--EE---TTCCCHHHHHHHHTTTCCEEC-----
T ss_pred HHHHHHHHHhcCCCCeeEcCcccCCCHHHHHHHHHHHHhhCCCCCcE--EE---eCCCCHHHHHHHHHcCCCEEeCcHHH
Confidence 6678899999999999997733223457899999999999985 333 33 2333 568999999999999988664
Q ss_pred CCC
Q 012949 383 LGG 385 (452)
Q Consensus 383 lGe 385 (452)
.=.
T Consensus 286 r~A 288 (386)
T 3bld_A 286 RSG 288 (386)
T ss_dssp ---
T ss_pred HHH
Confidence 433
No 448
>1gnx_A Beta-glucosidase; hydrolase, glycosyltransferase, family 1 of glycosyl hydrolase; HET: SUC; 1.68A {Streptomyces SP} SCOP: c.1.8.4 PDB: 1gon_A
Probab=77.76 E-value=6.1 Score=41.30 Aligned_cols=84 Identities=13% Similarity=0.046 Sum_probs=59.3
Q ss_pred cHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCC--------CCC
Q 012949 229 YLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVE--------GAI 300 (452)
Q Consensus 229 ~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~--------~r~ 300 (452)
+++|++.+++.|++.+|+.++=+-++-+. .+.--++.++-+.++++.+++.|+++.++|.. |+.|.. .+-
T Consensus 73 y~eDi~lm~~lG~~~yRfsIsWsRI~P~g-~g~~n~~gl~~Y~~lid~l~~~GI~p~vtL~H-~d~P~~L~~~GGw~~r~ 150 (479)
T 1gnx_A 73 WREDVALMAELGLGAYRFSLAWPRIQPTG-RGPALQKGLDFYRRLADELLAKGIQPVATLYH-WDLPQELENAGGWPERA 150 (479)
T ss_dssp HHHHHHHHHHTTCSEEEEECCHHHHSGGG-SSSCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SCCBHHHHHTTCTTSTH
T ss_pred CHHHHHHHHHcCCCEEEecccHHHhccCC-CCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCC-CcccHHHHhcCCCCCHH
Confidence 35799999999999999998655544322 13334688999999999999999999988876 445532 233
Q ss_pred CHHHHHHHHHHHHH
Q 012949 301 PPSKVAYVAKELHD 314 (452)
Q Consensus 301 d~e~l~~~a~~l~~ 314 (452)
..+.++++++.+.+
T Consensus 151 ~v~~F~~ya~~~~~ 164 (479)
T 1gnx_A 151 TAERFAEYAAIAAD 164 (479)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 34555566655443
No 449
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=77.70 E-value=17 Score=38.64 Aligned_cols=78 Identities=12% Similarity=0.005 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEeecccCC
Q 012949 304 KVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCSVAGL 383 (452)
Q Consensus 304 ~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~Sv~Gl 383 (452)
+..+-++.|.++|+|.|.| ||+=. .-..+.++++.+++.+|+++|-.=-=-|. ..+..-+++|||.|-+.+++=
T Consensus 281 d~~eR~~aLv~AGvD~ivi-D~ahG-hs~~v~~~i~~ik~~~p~~~viaGNVaT~----e~a~~Li~aGAD~vkVGiGpG 354 (556)
T 4af0_A 281 GDKDRLKLLAEAGLDVVVL-DSSQG-NSVYQIEFIKWIKQTYPKIDVIAGNVVTR----EQAAQLIAAGADGLRIGMGSG 354 (556)
T ss_dssp HHHHHHHHHHHTTCCEEEE-CCSCC-CSHHHHHHHHHHHHHCTTSEEEEEEECSH----HHHHHHHHHTCSEEEECSSCS
T ss_pred cHHHHHHHHHhcCCcEEEE-ecccc-ccHHHHHHHHHHHhhCCcceEEeccccCH----HHHHHHHHcCCCEEeecCCCC
Confidence 4556788899999999988 76643 35667889999999999865543221121 234555689999998887764
Q ss_pred CCCC
Q 012949 384 GGCP 387 (452)
Q Consensus 384 GecP 387 (452)
.-|.
T Consensus 355 SiCt 358 (556)
T 4af0_A 355 SICI 358 (556)
T ss_dssp TTBC
T ss_pred cccc
Confidence 4443
No 450
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=77.56 E-value=6.8 Score=37.08 Aligned_cols=70 Identities=13% Similarity=0.065 Sum_probs=54.3
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEee
Q 012949 300 IPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDC 378 (452)
Q Consensus 300 ~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~ 378 (452)
.+++...++++++.+.|++.|.+.-+ +|. ..+.|+.+++++|+..++.- +. +-...+..|+++||+.|.+
T Consensus 43 ~~~~~a~~~a~al~~gGi~~iEvt~~----t~~-a~e~I~~l~~~~~~~~iGaG---TV-lt~~~a~~Ai~AGA~fIvs 112 (232)
T 4e38_A 43 DNAEDIIPLGKVLAENGLPAAEITFR----SDA-AVEAIRLLRQAQPEMLIGAG---TI-LNGEQALAAKEAGATFVVS 112 (232)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEETT----STT-HHHHHHHHHHHCTTCEEEEE---CC-CSHHHHHHHHHHTCSEEEC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCC----CCC-HHHHHHHHHHhCCCCEEeEC---Cc-CCHHHHHHHHHcCCCEEEe
Confidence 46789999999999999999998544 343 35778889999987655543 32 4478889999999999853
No 451
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=77.51 E-value=57 Score=34.91 Aligned_cols=252 Identities=13% Similarity=0.103 Sum_probs=134.4
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhcc--CCceeEEecchhhhhhhhhhhhhccchh
Q 012949 144 TVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLE--GARLPVLTPNLKVILQRSILFQQCHASV 221 (452)
Q Consensus 144 ~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~--~~~l~~l~~~~~~~i~r~~~~~~~~~~~ 221 (452)
.++..++..| +...+.|++.|-+.|-.++ .|..++.+.+++.. .+.+.+-+-+..
T Consensus 170 ~ltekD~~di-~~~l~~g~d~v~~sfV~~a------~dv~~~~~~l~~~~~~~~~iiakIE~~e---------------- 226 (587)
T 2e28_A 170 GITEKDRADI-LFGIRQGIDFIAASFVRRA------SDVLEIRELLEAHDALHIQIIAKIENEE---------------- 226 (587)
T ss_dssp SCCHHHHHHH-HHHHHHTCSEEEESSCCSH------HHHHHHHHHHHHTTCTTSEEEEEECSHH----------------
T ss_pred CCCcccHHHH-HHHHHcCCCEEEECCCCCH------HHHHHHHHHHHHcCCCCceEEEEECCHH----------------
Confidence 3666776665 5666789999999653222 23333444443321 233333332211
Q ss_pred hhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCC-CCCC
Q 012949 222 ISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPV-EGAI 300 (452)
Q Consensus 222 i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~-~~r~ 300 (452)
-.+.++..++. .|.|.|. -.|.-.+. ..++.....+++++.|+++|.+|...-.+ .-+.. ..+.
T Consensus 227 -------av~nldeIl~~-~DgImVa--rgDLgvei----~~~~v~~~qk~ii~~~~~~gkpvi~ATQm-LeSMi~~p~P 291 (587)
T 2e28_A 227 -------GVANIDEILEA-ADGLMVA--RGDLGVEI----PAEEVPLIQKLLIKKSNMLGKPVITATQM-LDSMQRNPRP 291 (587)
T ss_dssp -------HHHTHHHHHHH-SSEEEEE--HHHHHHHS----CGGGHHHHHHHHHHHHHHHTCCEEEESSS-SGGGGTCSSC
T ss_pred -------HHHhHHHHHHh-CCEEEEc--Cchhhhhc----CHHHHHHHHHHHHHHHHHcCCCeEEechh-hHhhccCCCc
Confidence 11245555544 3766554 33432221 23555666678999999999998632111 00011 1234
Q ss_pred CHHHHHHHHHHHHHCCcCEEEEc-CCcCCCcHHHHHHHHHHHHHhCCCccEE----EE--eCCC-----cCcHHHHHHHH
Q 012949 301 PPSKVAYVAKELHDMGCFEISLG-DTIGVGTPGTVVPMLEAVMAVVPVEKLA----VH--LHDT-----YGQSLPNILIS 368 (452)
Q Consensus 301 d~e~l~~~a~~l~~~Gad~I~L~-DT~G~~~P~~v~~li~~l~~~~p~~~l~----vH--~Hnd-----~GlA~ANaLaA 368 (452)
+..++.+++.+..+ |+|.|.|. .|+-.-.|-+..+++..+..+.-.. +. ++ .+.. -..|.|...+|
T Consensus 292 TRAE~sDvanav~d-G~DavMLSgETA~G~yPveaV~~m~~I~~~~E~~-~~~~~~~~~~~~~~~~~~~~aia~aa~~~a 369 (587)
T 2e28_A 292 TRAEASDVANAIFD-GTDAVMLSGETAAGQYPVEAVKTMHQIALRTEQA-LEHRDILSQRTKESQTTITDAIGQSVAHTA 369 (587)
T ss_dssp CHHHHHHHHHHHHH-TCSEEEESHHHHTCSCHHHHHHHHHHHHHHHHTT-CCHHHHHHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred cHHHHhccchhhhh-CcceeeecccccCCCCHHHHHHHHHHHHHHHhhh-hhhhhHhhhhhcccccchHHHHHHHHHHHH
Confidence 56788888888776 89999994 5666668988877777766554210 11 11 1111 12455555677
Q ss_pred HHcCCC-EEeecccCCC------CCCCCCCCCCcccHHHHHHHHHc-CCCCC-----CCChhhHHHHHHHHHHHhCCCCC
Q 012949 369 LQMGIS-TVDCSVAGLG------GCPYAKGASGNVATEDVVYMLSG-LGVET-----NVDLRKLMLAGDFINKHLGRPSG 435 (452)
Q Consensus 369 l~aGa~-~VD~Sv~GlG------ecP~a~graGNaalE~vv~~L~~-~Gi~t-----~iDl~~L~~la~~v~~~~g~~~p 435 (452)
...+|. +|-.|-.|-- -.|-+|- -..++-+.+...|.- .|+.+ .-|.+.+.+.+.......|+-.+
T Consensus 370 ~~~~a~aIv~~T~sG~ta~~isr~Rp~~pI-~a~t~~~~~~r~l~l~~GV~p~~~~~~~~~~~~~~~a~~~~~~~G~~k~ 448 (587)
T 2e28_A 370 LNLDVAAIVTPTVSGKTPQMVAKYRPKAPI-IAVTSNEAVSRRLALVWGVYTKEAPHVNTTDEMLDVAVDAAVRSGLVKH 448 (587)
T ss_dssp HHTTCSEEEEECSSSHHHHHHHHTCCSSCE-EEEESSHHHHHHGGGSTTEEEEECCCCCSHHHHHHHHHHHHHHHTCCCT
T ss_pred HhCCCCEEEEECCCcHHHHHHHhcCCCCCE-EEECCCHHHHHHHHHhcCceEEeccccCCHHHHHHHHHHHHHhCCcccc
Confidence 778887 4556666532 1122221 123456777766664 35432 23455555555444444555444
Q ss_pred C
Q 012949 436 S 436 (452)
Q Consensus 436 ~ 436 (452)
.
T Consensus 449 G 449 (587)
T 2e28_A 449 G 449 (587)
T ss_dssp T
T ss_pred c
Confidence 3
No 452
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=77.48 E-value=45 Score=30.85 Aligned_cols=193 Identities=9% Similarity=-0.050 Sum_probs=97.1
Q ss_pred hHHHHHHcCCCEEEEEecCChH---HHhhhcCCCHHHHHHHHHHHHHHHHhCC--CcEEEEEEeeecCCCCCCCCHHHHH
Q 012949 232 GFEAAIAAGAKEVAIFASASEA---FSKSNINCSIEDSLVRYRAVAHAAKVLS--IPVRGYVSCVVGCPVEGAIPPSKVA 306 (452)
Q Consensus 232 ~ie~a~~~Gi~~V~i~~s~Sd~---~~~~~~~~s~e~~l~~~~~~v~~Ak~~G--~~V~~~l~~~~g~p~~~r~d~e~l~ 306 (452)
.++.+.+.|+..|.+-....+. ..-...+.+-. +....++++..+.| ..-.+.|. |. .......+.+.
T Consensus 78 ~~~~~~~~giPvV~~~~~~~~~~~~~~~~~V~~D~~---~~g~~a~~~l~~~g~~~~~i~~i~---g~-~~~~~~~~R~~ 150 (297)
T 3rot_A 78 SLQRANKLNIPVIAVDTRPKDKTKNPYLVFLGSDNL---LAGKKLGEKALELTPSAKRALVLN---PQ-PGHIGLEKRAY 150 (297)
T ss_dssp HHHHHHHHTCCEEEESCCCSCTTTSCCSCEEECCHH---HHHHHHHHHHHHHCTTCCEEEEEE---SC-TTCHHHHHHHH
T ss_pred HHHHHHHCCCCEEEEcCCCccccccCcceEEccChH---HHHHHHHHHHHHhcCCCceEEEEe---CC-CCcHHHHHHHH
Confidence 5677788898887765433220 00011233333 33445667766777 44323332 22 22223335666
Q ss_pred HHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCC-cCcHHHHHHHHHHcCCCE--EeecccCC
Q 012949 307 YVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDT-YGQSLPNILISLQMGIST--VDCSVAGL 383 (452)
Q Consensus 307 ~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd-~GlA~ANaLaAl~aGa~~--VD~Sv~Gl 383 (452)
.+.+.+.+.|...+.+. +...+...++.++.+.+..|.+. .+-+.|| ..+++..++ -++|.+. =|.+|.|+
T Consensus 151 Gf~~~l~~~g~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~-ai~~~~d~~A~g~~~al--~~~g~~vP~~dv~vig~ 224 (297)
T 3rot_A 151 GIKTILQDKGIFFEELD---VGTDPNQVQSRVKSYFKIHPETN-IIFCLTSQALDPLGQML--LHPDRYDFNYQPQVYSF 224 (297)
T ss_dssp HHHHHHHHTTCEEEEEE---CCSCHHHHHHHHHHHHHHCTTCC-EEEESSHHHHHHHHHHH--HSHHHHTCCCCCEEEEE
T ss_pred HHHHHHHhcCCeEEEee---cCCChHHHHHHHHHHHHhCCCCC-EEEEcCCcchHHHHHHH--HhcCCccCCCceEEEEe
Confidence 67788888888766543 34468888888888777777643 4555554 334443333 3456431 26788887
Q ss_pred CCCCCCCCCCCcccHHHHHHHHHcCCCCC--CCChhhHHH-HHHHHHHHh-CCCCCCCcccccchhhhhcc
Q 012949 384 GGCPYAKGASGNVATEDVVYMLSGLGVET--NVDLRKLML-AGDFINKHL-GRPSGSKTAIALNRIAADAS 450 (452)
Q Consensus 384 GecP~a~graGNaalE~vv~~L~~~Gi~t--~iDl~~L~~-la~~v~~~~-g~~~p~~~pi~G~~vf~h~S 450 (452)
+. .+ ..+..+..-...+ ..+...+-. +.+.+.+.+ |...|.. -.++-+...++|
T Consensus 225 D~----------~~--~~~~~i~~~~~lttv~~~~~~~g~~av~~l~~~i~g~~~~~~-i~~~~~~~~~~~ 282 (297)
T 3rot_A 225 DK----------TP--NTVSLIHKKLVNYVMDQQPFLMGYLSITQLVLMNRYQLNPVN-INTAMAENLYFQ 282 (297)
T ss_dssp CC----------CH--HHHHHHHTTSCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCC-EECCC-------
T ss_pred CC----------CH--HHHHHHHcCCceEEEecChHHHHHHHHHHHHHHHhCCCCCcc-cccCceEEecch
Confidence 76 22 2223333211112 455555433 444454444 5555544 445656555543
No 453
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=77.46 E-value=3.5 Score=39.95 Aligned_cols=86 Identities=19% Similarity=0.259 Sum_probs=54.2
Q ss_pred HHHHHHHHCCcCEEEE-cCCcCCCcHHHHHHHHHHHHHhCCC-ccEEEEeCCCcCcHH-HHHHHHHHcCCCE--Eeeccc
Q 012949 307 YVAKELHDMGCFEISL-GDTIGVGTPGTVVPMLEAVMAVVPV-EKLAVHLHDTYGQSL-PNILISLQMGIST--VDCSVA 381 (452)
Q Consensus 307 ~~a~~l~~~Gad~I~L-~DT~G~~~P~~v~~li~~l~~~~p~-~~l~vH~Hnd~GlA~-ANaLaAl~aGa~~--VD~Sv~ 381 (452)
.+++++.++|++.|.= .--+|...+-...++++.+++..+. ++|-+ +-|.+. +-+..|++.||+. |.+.|.
T Consensus 136 ~~ak~l~~~G~~aVmPlg~pIGsG~Gi~~~~~L~~i~~~~~~~vPVI~----~GGI~tpsDAa~AmeLGAdgVlVgSAI~ 211 (268)
T 2htm_A 136 VLAKRLAALGTATVMPLAAPIGSGWGVRTRALLELFAREKASLPPVVV----DAGLGLPSHAAEVMELGLDAVLVNTAIA 211 (268)
T ss_dssp HHHHHHHHHTCSCBEEBSSSTTTCCCSTTHHHHHHHHHTTTTSSCBEE----ESCCCSHHHHHHHHHTTCCEEEESHHHH
T ss_pred HHHHHHHhcCCCEEEecCccCcCCcccCCHHHHHHHHHhcCCCCeEEE----eCCCCCHHHHHHHHHcCCCEEEEChHHh
Confidence 5778888889987732 3335555333334556666763333 44444 666665 6788899999995 566666
Q ss_pred CCCCCCCCCCCCCccc--HHHHHHHHH
Q 012949 382 GLGGCPYAKGASGNVA--TEDVVYMLS 406 (452)
Q Consensus 382 GlGecP~a~graGNaa--lE~vv~~L~ 406 (452)
+++++. .+.++.+++
T Consensus 212 ----------~a~dP~~ma~af~~Av~ 228 (268)
T 2htm_A 212 ----------EAQDPPAMAEAFRLAVE 228 (268)
T ss_dssp ----------TSSSHHHHHHHHHHHHH
T ss_pred ----------CCCCHHHHHHHHHHHHH
Confidence 456666 566666554
No 454
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=77.46 E-value=17 Score=30.92 Aligned_cols=74 Identities=19% Similarity=0.236 Sum_probs=40.8
Q ss_pred HHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCc-EEEEEEeeecCCCCCCCCHHHHHHHHHH
Q 012949 233 FEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIP-VRGYVSCVVGCPVEGAIPPSKVAYVAKE 311 (452)
Q Consensus 233 ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~-V~~~l~~~~g~p~~~r~d~e~l~~~a~~ 311 (452)
++.+.+.+.+.|.++..... .+..+.++++..|+.|.. +.+.+. |.+. .+++.+.+..+.
T Consensus 47 v~~a~~~~~d~v~lS~~~~~-------------~~~~~~~~i~~l~~~g~~~i~v~vG---G~~~---~~~~~~~~~~~~ 107 (137)
T 1ccw_A 47 IKAAIETKADAILVSSLYGQ-------------GEIDCKGLRQKCDEAGLEGILLYVG---GNIV---VGKQHWPDVEKR 107 (137)
T ss_dssp HHHHHHHTCSEEEEEECSST-------------HHHHHTTHHHHHHHTTCTTCEEEEE---ESCS---SSSCCHHHHHHH
T ss_pred HHHHHhcCCCEEEEEecCcC-------------cHHHHHHHHHHHHhcCCCCCEEEEE---CCCc---CchHhhhhhHHH
Confidence 34556667787777765433 234556677777777762 332121 2221 122233444566
Q ss_pred HHHCCcCEEEEcCC
Q 012949 312 LHDMGCFEISLGDT 325 (452)
Q Consensus 312 l~~~Gad~I~L~DT 325 (452)
+.++|+|.+.-..|
T Consensus 108 ~~~~G~d~~~~~g~ 121 (137)
T 1ccw_A 108 FKDMGYDRVYAPGT 121 (137)
T ss_dssp HHHTTCSEECCTTC
T ss_pred HHHCCCCEEECCCC
Confidence 77889987765444
No 455
>2z2u_A UPF0026 protein MJ0257; metal binding protein; 2.40A {Methanocaldococcus jannaschii}
Probab=77.44 E-value=50 Score=31.35 Aligned_cols=110 Identities=5% Similarity=-0.114 Sum_probs=61.0
Q ss_pred HHcCCCEEEEEecC-Ch-HHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHHHHHH
Q 012949 237 IAAGAKEVAIFASA-SE-AFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHD 314 (452)
Q Consensus 237 ~~~Gi~~V~i~~s~-Sd-~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~ 314 (452)
.+.|.+.|.+.+.. ++ .|. .++......++.+.+.++.+++.| .+...+. +. +.... +.+ ++++.+.+
T Consensus 172 ~~L~~~~v~isld~~~~~~~~--~i~~~~~~~~~~v~~~i~~l~~~g-~v~i~~~--~~-~g~n~-~~~---~~~~~~~~ 241 (311)
T 2z2u_A 172 EKIEPTQLYISLDAYDLDSYR--RICGGKKEYWESILNTLDILKEKK-RTCIRTT--LI-RGYND-DIL---KFVELYER 241 (311)
T ss_dssp HHCCCSEEEEECCCSSTTTC------CCCHHHHHHHHHHHHHHTTSS-SEEEEEE--EC-TTTTC-CGG---GTHHHHHH
T ss_pred HhCCCCEEEEEeecCCHHHHH--HHhCCccchHHHHHHHHHHHHhcC-CEEEEEE--EE-CCcch-hHH---HHHHHHHH
Confidence 34488888887644 33 222 122222356788888889999998 7654443 21 21111 334 44444555
Q ss_pred CCcCEEEEc------CC------cCCCcHHHHHHHHHHHHHhCCCccEEEEeCC
Q 012949 315 MGCFEISLG------DT------IGVGTPGTVVPMLEAVMAVVPVEKLAVHLHD 356 (452)
Q Consensus 315 ~Gad~I~L~------DT------~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hn 356 (452)
.|++.|.|- .+ ....+|+++.++++.+.+..+-..++-|.|.
T Consensus 242 ~~~~~i~l~~~~p~g~~~~~~~~~~~~~~~e~~~~~~~l~~~~g~~~~~~~~~~ 295 (311)
T 2z2u_A 242 ADVHFIELKSYMHVGYSQKRLKKEDMLQHDEILKLAKMLDENSSYKLIDDSEDS 295 (311)
T ss_dssp HTCSEEEEEECC------------CCCCHHHHHHHHHHHHTSSSEEEEEEEGGG
T ss_pred cCCCEEEEEeeEEccccccccccccCCCHHHHHHHHHHHHHhcCceEEeccCcc
Confidence 688877631 11 1345778899998888875432223445554
No 456
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=77.34 E-value=12 Score=34.61 Aligned_cols=71 Identities=14% Similarity=0.062 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHCCcCEEEEcCCcCCCc-HHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEee
Q 012949 304 KVAYVAKELHDMGCFEISLGDTIGVGT-PGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDC 378 (452)
Q Consensus 304 ~l~~~a~~l~~~Gad~I~L~DT~G~~~-P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~ 378 (452)
...++++.+.++|++.|.+.|..+... .....++++.+++.++ +||.+|.--.. ...+..++++||+.|..
T Consensus 31 d~~~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~~-ipvi~~ggI~~---~~~~~~~~~~Gad~V~l 102 (253)
T 1thf_D 31 DPVELGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQID-IPFTVGGGIHD---FETASELILRGADKVSI 102 (253)
T ss_dssp CHHHHHHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHTTCC-SCEEEESSCCS---HHHHHHHHHTTCSEEEE
T ss_pred CHHHHHHHHHHcCCCEEEEECCchhhcCCcccHHHHHHHHHhCC-CCEEEeCCCCC---HHHHHHHHHcCCCEEEE
Confidence 445667888888999888888765432 2334566777777654 46777643321 34566677788887754
No 457
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=77.33 E-value=20 Score=34.67 Aligned_cols=98 Identities=16% Similarity=0.113 Sum_probs=63.5
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 310 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~ 310 (452)
+.++..++.|++.|-+.-+..|.+ -.|.+|-.+-++.+++.++ | |.+ | .+..+.+...++++
T Consensus 24 ~lv~~li~~Gv~gl~~~GttGE~~-----~Ls~eEr~~v~~~~~~~~~--g--via------G---vg~~~t~~ai~la~ 85 (293)
T 1w3i_A 24 IHAENLIRKGIDKLFVNGTTGLGP-----SLSPEEKLENLKAVYDVTN--K--IIF------Q---VGGLNLDDAIRLAK 85 (293)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTGG-----GSCHHHHHHHHHHHHTTCS--C--EEE------E---CCCSCHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECccccChh-----hCCHHHHHHHHHHHHHHcC--C--EEE------e---cCCCCHHHHHHHHH
Confidence 366777889999988887777753 3466665554444443322 2 321 1 12345678888999
Q ss_pred HHHHCCcCEEEEcCC-cCC-CcHHHHHHHHHHHHHhCC
Q 012949 311 ELHDMGCFEISLGDT-IGV-GTPGTVVPMLEAVMAVVP 346 (452)
Q Consensus 311 ~l~~~Gad~I~L~DT-~G~-~~P~~v~~li~~l~~~~p 346 (452)
.+.++|+|.+-+.=. .-- .+++.+.+.++.+.+..+
T Consensus 86 ~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~ 123 (293)
T 1w3i_A 86 LSKDFDIVGIASYAPYYYPRMSEKHLVKYFKTLCEVSP 123 (293)
T ss_dssp HGGGSCCSEEEEECCCSCSSCCHHHHHHHHHHHHHHCS
T ss_pred HHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHHHHhhCC
Confidence 999999996665433 222 477888888888887754
No 458
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=77.18 E-value=31 Score=33.69 Aligned_cols=127 Identities=22% Similarity=0.278 Sum_probs=73.5
Q ss_pred hHHHHHHcCCCEEEEEe-cCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHH
Q 012949 232 GFEAAIAAGAKEVAIFA-SASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 310 (452)
Q Consensus 232 ~ie~a~~~Gi~~V~i~~-s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~ 310 (452)
..+..++.|++.|.|-. +..+- ....+.++-++++..+++..++.++.+. + |.. .+ ++++
T Consensus 57 ~a~~~v~~GAdIIDIGgeSTrPg----a~~v~~~eE~~Rv~pvI~~l~~~~vpiS------I---DT~--~~----~Va~ 117 (294)
T 2dqw_A 57 RAREMVAEGADILDLGAESTRPG----AAPVPVEEEKRRLLPVLEAVLSLGVPVS------V---DTR--KP----EVAE 117 (294)
T ss_dssp HHHHHHHHTCSEEEEECC---------------CCHHHHHHHHHHHHHTTCSCEE------E---ECS--CH----HHHH
T ss_pred HHHHHHHCCCCEEEECCCcCCCC----CCCCCHHHHHHHHHHHHHHHHhCCCeEE------E---ECC--CH----HHHH
Confidence 45667789999999986 32221 0123556778899999999887766654 1 222 22 5677
Q ss_pred HHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeC-CCc---------C--------cHHHHHHHHHHcC
Q 012949 311 ELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLH-DTY---------G--------QSLPNILISLQMG 372 (452)
Q Consensus 311 ~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~H-nd~---------G--------lA~ANaLaAl~aG 372 (452)
++.++|++.| -|..|...| ++.++++ + +...-+..|.. -+. . -.....-.|.++|
T Consensus 118 aAl~aGa~iI--NdVsg~~d~-~m~~v~a---~-~~~~vVlmh~~eG~p~tm~~~~~y~dv~~ev~~~l~~~i~~a~~~G 190 (294)
T 2dqw_A 118 EALKLGAHLL--NDVTGLRDE-RMVALAA---R-HGVAAVVMHMPVPDPATMMAHARYRDVVAEVKAFLEAQARRALSAG 190 (294)
T ss_dssp HHHHHTCSEE--ECSSCSCCH-HHHHHHH---H-HTCEEEEECCSSSCTTTGGGGCCCSSHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhCCCEE--EECCCCCCh-HHHHHHH---H-hCCCEEEEcCCCCCCccccccCccccHHHHHHHHHHHHHHHHHHCC
Confidence 7777899955 587777555 4444433 3 33323667765 111 1 1223455677899
Q ss_pred CC--EEeecccCCCC
Q 012949 373 IS--TVDCSVAGLGG 385 (452)
Q Consensus 373 a~--~VD~Sv~GlGe 385 (452)
+. ++|-.+ |+|.
T Consensus 191 i~~IilDPG~-Gf~k 204 (294)
T 2dqw_A 191 VPQVVLDPGF-GFGK 204 (294)
T ss_dssp CSCEEEECCT-TSSC
T ss_pred CCcEEEcCCC-Cccc
Confidence 96 668754 4544
No 459
>1a0c_A Xylose isomerase; ketolisomerase, xylose metabolism, glucose-fructose interconversion, hydride transfer; 2.50A {Thermoanaerobacteriumthermosulfurigenes} SCOP: c.1.15.3 PDB: 1a0d_A 1a0e_A
Probab=77.12 E-value=8.6 Score=39.64 Aligned_cols=121 Identities=7% Similarity=0.014 Sum_probs=61.5
Q ss_pred cHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCH----HHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCC--CCCCCH
Q 012949 229 YLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSI----EDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPV--EGAIPP 302 (452)
Q Consensus 229 ~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~----e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~--~~r~d~ 302 (452)
..+.++.|.+.|++.+.+....... ....+.+. +...+.+..++++|++.|+.+...|...-+-|. .--.+.
T Consensus 169 lk~aId~A~~LGa~~vv~~~G~~G~--~~~~~~~~~~~~~~~~e~L~~~~~~A~~~Gv~v~l~IEp~p~~~~~~~~~~t~ 246 (438)
T 1a0c_A 169 VKKALEITKELGGENYVFWGGREGY--ETLLNTDMEFELDNFARFLHMAVDYAKEIGFEGQFLIEPKPKEPTKHQYDFDV 246 (438)
T ss_dssp HHHHHHHHHHTTCSEEEECCTTSEE--SCGGGCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECCCSCSSSSEESSCSH
T ss_pred HHHHHHHHHHcCCCEEEEccCCCcc--ccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCCCCCCCcccCCH
Confidence 3467888899999998886543100 00112233 445566667778899998766655664211111 112355
Q ss_pred HHHHHHHHHHHHCCcC---EEEEcCCcCCCcH-HHHHHHHHHHHHhCCCccEEEEeCCC
Q 012949 303 SKVAYVAKELHDMGCF---EISLGDTIGVGTP-GTVVPMLEAVMAVVPVEKLAVHLHDT 357 (452)
Q Consensus 303 e~l~~~a~~l~~~Gad---~I~L~DT~G~~~P-~~v~~li~~l~~~~p~~~l~vH~Hnd 357 (452)
+.+..+++ +.|.+ .+++ ||.=.... ..+...++.+.. .+- -.++|.++.
T Consensus 247 ~~al~li~---~vg~pn~vgv~l-Dt~H~~~~g~di~~~i~~~~~-~~~-L~hvHlnD~ 299 (438)
T 1a0c_A 247 ANVLAFLR---KYDLDKYFKVNI-EANHATLAFHDFQHELRYARI-NGV-LGSIDANTG 299 (438)
T ss_dssp HHHHHHHH---HTTCTTTEEEEE-EHHHHHHTTCCHHHHHHHHHH-TTC-EEEEECCBC
T ss_pred HHHHHHHH---HcCCCCeEEEEE-EhhhhhhcCCCHHHHHHHhcC-CCc-EEEEECCCC
Confidence 55555554 44532 2333 65332111 123333333322 232 367788775
No 460
>1vff_A Beta-glucosidase; glycosyl hydrolase, membrane-bound enzyme, thermostability, TIM barrel, alkylglucosides; 2.50A {Pyrococcus horikoshii} SCOP: c.1.8.4
Probab=77.11 E-value=5 Score=41.26 Aligned_cols=59 Identities=15% Similarity=0.109 Sum_probs=46.3
Q ss_pred HHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEe
Q 012949 230 LQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSC 290 (452)
Q Consensus 230 ~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~ 290 (452)
.+|++.+++.|++.+|+.++=+.++-+ -+.=-++.++.+.++++.+++.|+++.++|..
T Consensus 53 ~eDi~lm~~~G~~~~R~si~W~ri~P~--~g~~n~~gl~~yd~lid~l~~~GI~pivtL~H 111 (423)
T 1vff_A 53 RDDIQLMTSLGYNAYRFSIEWSRLFPE--ENKFNEDAFMKYREIIDLLLTRGITPLVTLHH 111 (423)
T ss_dssp HHHHHHHHHHTCCEEEEECCHHHHCSB--TTBCCHHHHHHHHHHHHHHHHTTCEEEEEEES
T ss_pred HHHHHHHHHcCCCEEEeecCHHHhCCC--CCCcCHHHHHHHHHHHHHHHHCCCEEEEEccC
Confidence 469999999999999998854433222 13334678999999999999999999887774
No 461
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=77.04 E-value=20 Score=37.09 Aligned_cols=129 Identities=17% Similarity=0.230 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhcc-CCceeEEecchhhhhhhhhhhhhccchhhhhhhh
Q 012949 149 VKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLE-GARLPVLTPNLKVILQRSILFQQCHASVISSNLW 227 (452)
Q Consensus 149 ~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~-~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~ 227 (452)
...+.++.|.++|++.|++.+.... + ....+.++.+++.. +. ++++.+..
T Consensus 237 ~~~~~a~~l~~aGvd~v~i~~~~G~---~--~~~~e~i~~i~~~~p~~--pvi~g~~~---------------------- 287 (494)
T 1vrd_A 237 ETMERVEKLVKAGVDVIVIDTAHGH---S--RRVIETLEMIKADYPDL--PVVAGNVA---------------------- 287 (494)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCCS---S--HHHHHHHHHHHHHCTTS--CEEEEEEC----------------------
T ss_pred hHHHHHHHHHHhCCCEEEEEecCCc---h--HHHHHHHHHHHHHCCCc--eEEeCCcC----------------------
Confidence 3456788899999999999653210 1 11234555555432 32 33222211
Q ss_pred ccHHhHHHHHHcCCCEEEEEecCC---hHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHH
Q 012949 228 VYLQGFEAAIAAGAKEVAIFASAS---EAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSK 304 (452)
Q Consensus 228 ~~~~~ie~a~~~Gi~~V~i~~s~S---d~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~ 304 (452)
..++.+.+.++|+|.|.+....- ........+...- ..+.++.+.+++.+++|.+ +.+-.+++.
T Consensus 288 -t~e~a~~l~~~G~d~I~v~~~~G~~~~~~~~~~~g~p~~---~~l~~v~~~~~~~~ipvia---------~GGI~~~~d 354 (494)
T 1vrd_A 288 -TPEGTEALIKAGADAVKVGVGPGSICTTRVVAGVGVPQL---TAVMECSEVARKYDVPIIA---------DGGIRYSGD 354 (494)
T ss_dssp -SHHHHHHHHHTTCSEEEECSSCSTTCHHHHHHCCCCCHH---HHHHHHHHHHHTTTCCEEE---------ESCCCSHHH
T ss_pred -CHHHHHHHHHcCCCEEEEcCCCCccccccccCCCCccHH---HHHHHHHHHHhhcCCCEEE---------ECCcCCHHH
Confidence 23477889999999999843211 0011111222333 3334445555556777652 234445666
Q ss_pred HHHHHHHHHHCCcCEEEEc
Q 012949 305 VAYVAKELHDMGCFEISLG 323 (452)
Q Consensus 305 l~~~a~~l~~~Gad~I~L~ 323 (452)
+.+.. .+||+.+.++
T Consensus 355 i~kal----a~GAd~V~iG 369 (494)
T 1vrd_A 355 IVKAL----AAGAESVMVG 369 (494)
T ss_dssp HHHHH----HTTCSEEEES
T ss_pred HHHHH----HcCCCEEEEC
Confidence 55443 4698887775
No 462
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=76.77 E-value=21 Score=36.70 Aligned_cols=76 Identities=8% Similarity=-0.042 Sum_probs=50.8
Q ss_pred CHHHHHHHHHHHHHCCcCEEEEcCCcCC-------------C--c--HHHHHHHHHHHHHhCC-CccEEEEeCCCcCcHH
Q 012949 301 PPSKVAYVAKELHDMGCFEISLGDTIGV-------------G--T--PGTVVPMLEAVMAVVP-VEKLAVHLHDTYGQSL 362 (452)
Q Consensus 301 d~e~l~~~a~~l~~~Gad~I~L~DT~G~-------------~--~--P~~v~~li~~l~~~~p-~~~l~vH~Hnd~GlA~ 362 (452)
+.+.+.++++.+.++|+|.|.+-.|.+. + . ....-++|+.+++.++ .++|-.=. ..-- -
T Consensus 281 ~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~G--GI~s-~ 357 (415)
T 3i65_A 281 NQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASG--GIFS-G 357 (415)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEECS--SCCS-H
T ss_pred CHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEEC--CCCC-H
Confidence 4568899999999999999999987641 1 1 1234567888888774 33443211 1111 2
Q ss_pred HHHHHHHHcCCCEEeec
Q 012949 363 PNILISLQMGISTVDCS 379 (452)
Q Consensus 363 ANaLaAl~aGa~~VD~S 379 (452)
..++.++.+||+.|...
T Consensus 358 eDa~e~l~aGAd~VqIg 374 (415)
T 3i65_A 358 LDALEKIEAGASVCQLY 374 (415)
T ss_dssp HHHHHHHHHTEEEEEES
T ss_pred HHHHHHHHcCCCEEEEc
Confidence 56788888999877654
No 463
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=76.74 E-value=7.5 Score=38.50 Aligned_cols=71 Identities=10% Similarity=0.043 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHCCcCEEEEcCCcC-CCcHHHHHHHH----HHHHHhCC--CccEEEEeCCCcCcHHHHHHHHHHcCCCEE
Q 012949 304 KVAYVAKELHDMGCFEISLGDTIG-VGTPGTVVPML----EAVMAVVP--VEKLAVHLHDTYGQSLPNILISLQMGISTV 376 (452)
Q Consensus 304 ~l~~~a~~l~~~Gad~I~L~DT~G-~~~P~~v~~li----~~l~~~~p--~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~V 376 (452)
.+.++++...++|++.|.+.|+.| .++|....+++ +.+.+.++ +.++-+|+..+ +. +...+ .+.|++.+
T Consensus 194 ~~~~~~~~~~~aGad~i~i~D~~~~~lsp~~f~ef~~p~~~~i~~~i~~~g~~~i~~~~G~-~~-~l~~l--~~~g~d~~ 269 (359)
T 2inf_A 194 MIIVYVKAQIKAGAKAIQIFDSWVGALNQADYRTYIKPVMNRIFSELAKENVPLIMFGVGA-SH-LAGDW--HDLPLDVV 269 (359)
T ss_dssp HHHHHHHHHHHTTCSEEEEECTTGGGSCHHHHHHHTHHHHHHHHHHHGGGCSCEEEECTTC-GG-GHHHH--HTSSCSEE
T ss_pred HHHHHHHHHHHhCCCEEEEeCCccccCCHHHHHHHhHHHHHHHHHHHHHcCCcEEEEcCCc-HH-HHHHH--HHhCCCEE
Confidence 344566777789999999998755 66676655442 22222222 35677777766 32 22222 26899987
Q ss_pred ee
Q 012949 377 DC 378 (452)
Q Consensus 377 D~ 378 (452)
..
T Consensus 270 ~~ 271 (359)
T 2inf_A 270 GL 271 (359)
T ss_dssp EC
T ss_pred Ee
Confidence 64
No 464
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=76.72 E-value=8.3 Score=36.97 Aligned_cols=94 Identities=16% Similarity=0.192 Sum_probs=70.1
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 310 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~ 310 (452)
..+...++.|..-|.+|-=--. ..++.++.+++.|-+.|+.++ -.+-.|.+.+.++.+
T Consensus 172 tAiaml~dmG~~SvKffPM~Gl------------~~leEl~avAkAca~~g~~lE----------PTGGIdl~Nf~~I~~ 229 (275)
T 3m6y_A 172 TAIALVRDMGGNSLKYFPMKGL------------AHEEEYRAVAKACAEEGFALE----------PTGGIDKENFETIVR 229 (275)
T ss_dssp HHHHHHHHHTCCEEEECCCTTT------------TTHHHHHHHHHHHHHHTCEEE----------EBSSCCTTTHHHHHH
T ss_pred HHHHHHHHcCCCeeeEeecCCc------------ccHHHHHHHHHHHHHcCceEC----------CCCCccHhHHHHHHH
Confidence 3566777899999998741111 246777788889989998332 345678899999999
Q ss_pred HHHHCCcCEE----E---EcCCcCCCcHHHHHHHHHHHHHhCC
Q 012949 311 ELHDMGCFEI----S---LGDTIGVGTPGTVVPMLEAVMAVVP 346 (452)
Q Consensus 311 ~l~~~Gad~I----~---L~DT~G~~~P~~v~~li~~l~~~~p 346 (452)
.+.++|+..| | |--..|.-.|++|++++..+++.+.
T Consensus 230 i~l~aGv~~viPHIYsSIIDk~TG~TrpedV~~ll~~~K~l~~ 272 (275)
T 3m6y_A 230 IALEANVEQVIPHVYSSIIDKETGNTKVEAVRELLAVVKKLVD 272 (275)
T ss_dssp HHHHTTCSCBCCEECGGGBCTTTCCBCHHHHHHHHHHHHHHHT
T ss_pred HHHHcCCCeecccccceeccCCCCCCCHHHHHHHHHHHHHHHh
Confidence 9999997543 2 3345799999999999999988653
No 465
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=76.72 E-value=40 Score=32.67 Aligned_cols=109 Identities=14% Similarity=0.106 Sum_probs=67.6
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 310 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~ 310 (452)
+.++.+.+.|++.|.+..... .+.++.+|+.|+++...+ .+++ .++
T Consensus 87 ~~~~~~~~~g~d~V~~~~g~p-------------------~~~~~~l~~~gi~vi~~v-----------~t~~----~a~ 132 (328)
T 2gjl_A 87 EYRAAIIEAGIRVVETAGNDP-------------------GEHIAEFRRHGVKVIHKC-----------TAVR----HAL 132 (328)
T ss_dssp HHHHHHHHTTCCEEEEEESCC-------------------HHHHHHHHHTTCEEEEEE-----------SSHH----HHH
T ss_pred HHHHHHHhcCCCEEEEcCCCc-------------------HHHHHHHHHcCCCEEeeC-----------CCHH----HHH
Confidence 477889999999988765321 134566777888775322 1233 355
Q ss_pred HHHHCCcCEEEEcCC-c----CCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcH-HHHHHHHHHcCCCEEeec
Q 012949 311 ELHDMGCFEISLGDT-I----GVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQS-LPNILISLQMGISTVDCS 379 (452)
Q Consensus 311 ~l~~~Gad~I~L~DT-~----G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA-~ANaLaAl~aGa~~VD~S 379 (452)
.+.++|+|.|.+-.. . |...+ ...++++.+++.+. +||-.= -|.. -.|..+++.+||+.|...
T Consensus 133 ~~~~~GaD~i~v~g~~~GG~~G~~~~-~~~~~l~~v~~~~~-iPviaa----GGI~~~~~v~~al~~GAdgV~vG 201 (328)
T 2gjl_A 133 KAERLGVDAVSIDGFECAGHPGEDDI-PGLVLLPAAANRLR-VPIIAS----GGFADGRGLVAALALGADAINMG 201 (328)
T ss_dssp HHHHTTCSEEEEECTTCSBCCCSSCC-CHHHHHHHHHTTCC-SCEEEE----SSCCSHHHHHHHHHHTCSEEEES
T ss_pred HHHHcCCCEEEEECCCCCcCCCCccc-cHHHHHHHHHHhcC-CCEEEE----CCCCCHHHHHHHHHcCCCEEEEC
Confidence 678899999987321 1 21111 23367777777653 344432 3553 357788888999988765
No 466
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=76.71 E-value=42 Score=30.04 Aligned_cols=82 Identities=15% Similarity=0.054 Sum_probs=48.0
Q ss_pred hHHHHHHcCCCEEEEEecC-ChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHH
Q 012949 232 GFEAAIAAGAKEVAIFASA-SEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 310 (452)
Q Consensus 232 ~ie~a~~~Gi~~V~i~~s~-Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~ 310 (452)
.++..++. ++.|.+.+.. ++-..+..-+.+. +++.+.++.+++.|+.+.+..... +.. ..+.+.+.++++
T Consensus 115 ~~~~l~~~-~~~v~isld~~~~~~~~~~~~~~~----~~~~~~i~~l~~~g~~v~i~~~~~---~g~-~~~~~~~~~~~~ 185 (245)
T 3c8f_A 115 VIDELLEV-TDLVMLDLKQMNDEIHQNLVGVSN----HRTLEFAKYLANKNVKVWIRYVVV---PGW-SDDDDSAHRLGE 185 (245)
T ss_dssp HHHHHHHT-CSEEEEECCCSSHHHHHHHHSSCS----HHHHHHHHHHHHHTCCEEEEEEEC---TTT-TCCHHHHHHHHH
T ss_pred HHHHHHHh-CCEEEEeCCCCCHHHhhhccCCCH----HHHHHHHHHHHhcCCEEEEEEeec---CCC-CCCHHHHHHHHH
Confidence 55666666 7888887644 4422222224443 445566677788888876443321 111 124678888888
Q ss_pred HHHHCCc-CEEEE
Q 012949 311 ELHDMGC-FEISL 322 (452)
Q Consensus 311 ~l~~~Ga-d~I~L 322 (452)
.+.+.|+ +.+.+
T Consensus 186 ~~~~~~~~~~~~~ 198 (245)
T 3c8f_A 186 FTRDMGNVEKIEL 198 (245)
T ss_dssp HHHHHCCEEEEEE
T ss_pred HHHhcCCCceeEE
Confidence 8888885 55554
No 467
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=76.59 E-value=14 Score=35.89 Aligned_cols=126 Identities=12% Similarity=0.122 Sum_probs=71.6
Q ss_pred CCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHHHHHHCC-cCEEEEcCCcCCCcHHHHHHHHH
Q 012949 261 CSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMG-CFEISLGDTIGVGTPGTVVPMLE 339 (452)
Q Consensus 261 ~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~G-ad~I~L~DT~G~~~P~~v~~li~ 339 (452)
.+.++.. ++++.+++.|+.- |.. .|.+..-+ + .+.++++.+.+.+ ...+.+ -|.|.+.++ .++
T Consensus 50 ls~e~i~----~~i~~~~~~g~~~---i~~-tGGEPll~--~-~l~~li~~~~~~~~~~~i~i-~TNG~ll~~----~~~ 113 (340)
T 1tv8_A 50 LTFDEMA----RIAKVYAELGVKK---IRI-TGGEPLMR--R-DLDVLIAKLNQIDGIEDIGL-TTNGLLLKK----HGQ 113 (340)
T ss_dssp CCHHHHH----HHHHHHHHTTCCE---EEE-ESSCGGGS--T-THHHHHHHHTTCTTCCEEEE-EECSTTHHH----HHH
T ss_pred CCHHHHH----HHHHHHHHCCCCE---EEE-eCCCccch--h-hHHHHHHHHHhCCCCCeEEE-EeCccchHH----HHH
Confidence 4555444 5556666778752 222 23222212 2 3567888887775 347777 688988754 445
Q ss_pred HHHHh-CCCccEEEEeCC------------CcCcHHHHHHHHHHcCCC-EEeecccCCCCCCCCCCCCCcccHHHHHHHH
Q 012949 340 AVMAV-VPVEKLAVHLHD------------TYGQSLPNILISLQMGIS-TVDCSVAGLGGCPYAKGASGNVATEDVVYML 405 (452)
Q Consensus 340 ~l~~~-~p~~~l~vH~Hn------------d~GlA~ANaLaAl~aGa~-~VD~Sv~GlGecP~a~graGNaalE~vv~~L 405 (452)
.+++. +..+.|.++..+ ++...+.+...+.++|.. .+++.+. -|. ---.+++++..+
T Consensus 114 ~L~~~g~~~v~iSld~~~~~~~~~i~~~~~~~~~v~~~i~~l~~~g~~v~i~~vv~-~g~--------n~~ei~~~~~~~ 184 (340)
T 1tv8_A 114 KLYDAGLRRINVSLDAIDDTLFQSINNRNIKATTILEQIDYATSIGLNVKVNVVIQ-KGI--------NDDQIIPMLEYF 184 (340)
T ss_dssp HHHHHTCCEEEEECCCSSHHHHHHHHSSCCCHHHHHHHHHHHHHTTCEEEEEEEEC-TTT--------TGGGHHHHHHHH
T ss_pred HHHHCCCCEEEEecCCCCHHHHHHhhCCCCCHHHHHHHHHHHHHCCCCEEEEEEEe-CCC--------CHHHHHHHHHHH
Confidence 55553 333455665533 344456666677788984 2344442 121 124688888888
Q ss_pred HcCCCC
Q 012949 406 SGLGVE 411 (452)
Q Consensus 406 ~~~Gi~ 411 (452)
+.+|++
T Consensus 185 ~~~g~~ 190 (340)
T 1tv8_A 185 KDKHIE 190 (340)
T ss_dssp HHTTCC
T ss_pred HhcCCe
Confidence 888764
No 468
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=76.53 E-value=32 Score=33.87 Aligned_cols=51 Identities=22% Similarity=0.295 Sum_probs=25.3
Q ss_pred CHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEe
Q 012949 301 PPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHL 354 (452)
Q Consensus 301 d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~ 354 (452)
+.+.-.++++.+.++|++.|-+. .-...|.+.. .++.+++..+...+...+
T Consensus 26 ~~~~Kl~ia~~L~~~Gv~~IE~g--~p~~~~~d~e-~v~~i~~~~~~~~i~~l~ 76 (325)
T 3eeg_A 26 NTEEKIIVAKALDELGVDVIEAG--FPVSSPGDFN-SVVEITKAVTRPTICALT 76 (325)
T ss_dssp CTTHHHHHHHHHHHHTCSEEEEE--CTTSCHHHHH-HHHHHHHHCCSSEEEEEC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEe--CCCCCHhHHH-HHHHHHHhCCCCEEEEee
Confidence 34455556666666666655553 1223454432 235555555554454444
No 469
>3f5l_A Beta-glucosidase; beta-alpha-barrels, glycosidase, hydrolase; HET: LB2 MES; 1.37A {Oryza sativa japonica group} PDB: 3aht_A* 3ahv_A* 3f5i_A* 3f5j_A* 3f5k_A* 3f4v_A* 2rgm_A* 2rgl_A* 3scr_A* 3scs_A* 3scp_A* 3scq_A* 3scu_A* 3scn_A* 3sco_A* 3sct_A* 3scv_A* 3scw_A*
Probab=76.44 E-value=4.7 Score=42.21 Aligned_cols=83 Identities=11% Similarity=-0.017 Sum_probs=59.2
Q ss_pred cHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCC---------CCC
Q 012949 229 YLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPV---------EGA 299 (452)
Q Consensus 229 ~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~---------~~r 299 (452)
+++|++.+++.|++.+|+.++=+-++-+. .+.=-++.++-+.++++.+++.|+++.++|.. |..|. ..+
T Consensus 75 ykeDi~lm~elG~~~yRfsIsWsRI~P~g-~g~~n~~Gl~~Y~~lid~l~~~GI~P~vTL~H-~dlP~~L~~~yGGW~nr 152 (481)
T 3f5l_A 75 YKEDVNLMKSLNFDAYRFSISWSRIFPDG-EGRVNQEGVAYYNNLINYLLQKGITPYVNLYH-YDLPLALEKKYGGWLNA 152 (481)
T ss_dssp HHHHHHHHHHTTCCEEEEECCHHHHCTTS-SSCCCHHHHHHHHHHHHHHHHTTCEEEEESCS-SCCBHHHHHHHCGGGST
T ss_pred HHHHHHHHHHcCCCEEEecCcHHHhCcCC-CCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCC-CCCCHHHHHHhCCCCCH
Confidence 45799999999999999998655443221 23334688999999999999999999888876 44442 123
Q ss_pred CCHHHHHHHHHHHH
Q 012949 300 IPPSKVAYVAKELH 313 (452)
Q Consensus 300 ~d~e~l~~~a~~l~ 313 (452)
-..+.++++|+.+.
T Consensus 153 ~~v~~F~~Ya~~~~ 166 (481)
T 3f5l_A 153 KMADLFTEYADFCF 166 (481)
T ss_dssp THHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 34556666666544
No 470
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=76.18 E-value=54 Score=35.24 Aligned_cols=254 Identities=12% Similarity=0.116 Sum_probs=133.8
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhc-cCCceeEEecchhhhhhhhhhhhhccchhhh
Q 012949 145 VPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDL-EGARLPVLTPNLKVILQRSILFQQCHASVIS 223 (452)
Q Consensus 145 ~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~-~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~ 223 (452)
++..++..| +.-.+.|+|+|-+.|-.++ .|..++.+.+... .+..+.+-+-+..
T Consensus 191 ltekD~~dl-~f~~~~~vD~Ia~SFVr~a------~Dv~~~r~~l~~~~~~i~IiaKIE~~e------------------ 245 (606)
T 3t05_A 191 ITEKDAEDI-RFGIKENVDFIAASFVRRP------SDVLEIREILEEQKANISVFPKIENQE------------------ 245 (606)
T ss_dssp SCHHHHHHH-HHHHHTTCSEEEETTCCSH------HHHHHHHHHHHHTTCCCEEEECCCSHH------------------
T ss_pred CChhHHHHH-HHHHHcCCCEEEECCCCCH------HHHHHHHHHHHhcCCCCeEEEEeCCHH------------------
Confidence 666777666 5667899999988653222 2333344444332 1233332222211
Q ss_pred hhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCC-CCCCCCH
Q 012949 224 SNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCP-VEGAIPP 302 (452)
Q Consensus 224 ~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p-~~~r~d~ 302 (452)
-.+.++..++. .|.|.|. -.|.-.+ ...++.....+++++.|+++|.+|...-.+ .-+. ...+.+.
T Consensus 246 -----av~nldeIl~~-sDGImVA--RGDLgve----i~~e~vp~~Qk~ii~~~~~~gkpvi~ATQM-LeSMi~~p~PTR 312 (606)
T 3t05_A 246 -----GIDNIEEILEV-SDGLMVA--RGDMGVE----IPPEKVPMVQKDLIRQCNKLGKPVITATQM-LDSMQRNPRATR 312 (606)
T ss_dssp -----HHHTHHHHHHH-CSCEEEE--HHHHHHH----SCGGGHHHHHHHHHHHHHHHTCCEEEESSS-SGGGTTCSSCCH
T ss_pred -----HHHhHHHHHHh-CCEEEEc--cccccCc----CCHHHHHHHHHHHHHHHHHcCCCeEEehHH-HHHhhcCCCccH
Confidence 11244555544 6766663 2232211 123455555678999999999998521111 1011 1124456
Q ss_pred HHHHHHHHHHHHCCcCEEEEc-CCcCCCcHHHHHHHHHHHHHhC---CCccEEEE-e----CCCc--CcHHHHHHHHHHc
Q 012949 303 SKVAYVAKELHDMGCFEISLG-DTIGVGTPGTVVPMLEAVMAVV---PVEKLAVH-L----HDTY--GQSLPNILISLQM 371 (452)
Q Consensus 303 e~l~~~a~~l~~~Gad~I~L~-DT~G~~~P~~v~~li~~l~~~~---p~~~l~vH-~----Hnd~--GlA~ANaLaAl~a 371 (452)
.++.+++.+..+ |+|.|.|. .|+-.-.|.+..+++..+..+. ..-.-.++ . ..+. ..|.|...+|...
T Consensus 313 AEvsDVanAv~d-GaDavMLSgETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~a~~l 391 (606)
T 3t05_A 313 AEASDVANAIYD-GTDAVMLSGETAAGLYPEEAVKTMRNIAVSAEAAQDYKKLLSDRTKLVETSLVNAIGISVAHTALNL 391 (606)
T ss_dssp HHHHHHHHHHHH-TCSEEEECHHHHSCSCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc-CCCEEEecccccCCCCHHHHHHHHHHHHHHHHhhhhhHhhhhhhccccCCCHHHHHHHHHHHHHHhc
Confidence 788888888776 89999997 5666668887777766665432 11000000 0 1111 2344555667778
Q ss_pred CCC-EEeecccCCCC------CCCCCCCCCcccHHHHHHHHHcC-CCCC-----CCChhhHHHHHHHHHHHhCCCCCCCc
Q 012949 372 GIS-TVDCSVAGLGG------CPYAKGASGNVATEDVVYMLSGL-GVET-----NVDLRKLMLAGDFINKHLGRPSGSKT 438 (452)
Q Consensus 372 Ga~-~VD~Sv~GlGe------cP~a~graGNaalE~vv~~L~~~-Gi~t-----~iDl~~L~~la~~v~~~~g~~~p~~~ 438 (452)
+|. +|-.|-.|--. .|-+|- -..++-+.+...|.-+ |+.+ .-|.+.+.+.+.......|.--+...
T Consensus 392 ~a~aIv~~T~sG~ta~~isr~RP~~pI-ia~t~~~~~~r~l~L~~GV~p~~~~~~~~~~~~~~~a~~~~~~~g~~~~GD~ 470 (606)
T 3t05_A 392 NVKAIVAATESGSTARTISKYRPHSDI-IAVTPSEETARQCSIVWGVQPVVKKGRKSTDALLNNAVATAVETGRVTNGDL 470 (606)
T ss_dssp TCSEEEEECSSSHHHHHHHHTCCSSEE-EEEESCHHHHHHHHTSSSEEEEECCCCSSHHHHHHHHHHHHHHTTSCCTTCE
T ss_pred CCCEEEEEcCCchHHHHHHhhCCCCCE-EEEcCCHHHHHhhhccCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCCCCE
Confidence 888 55666666311 121111 1234557777777653 5432 23555555555555555565444443
No 471
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=76.09 E-value=5.1 Score=40.56 Aligned_cols=22 Identities=14% Similarity=-0.043 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHH-hCCCc-EEE
Q 012949 265 DSLVRYRAVAHAAK-VLSIP-VRG 286 (452)
Q Consensus 265 ~~l~~~~~~v~~Ak-~~G~~-V~~ 286 (452)
+.++.+.++++.|+ +.|+. |..
T Consensus 171 ~~i~~f~~AA~~a~~~aGfDgVEi 194 (379)
T 3aty_A 171 GIIPLFVEGAKNAIFKAGFDGVEI 194 (379)
T ss_dssp THHHHHHHHHHHHHHTSCCSEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEE
Confidence 45666667778888 88987 443
No 472
>1wcg_A Thioglucosidase, myrosinase; aphid, beta-glucosidase, insect, beta-barrel, hydrolase, glycosidase; 1.10A {Brevicoryne brassicae} SCOP: c.1.8.4
Probab=75.87 E-value=5.5 Score=41.50 Aligned_cols=83 Identities=11% Similarity=-0.058 Sum_probs=57.6
Q ss_pred HHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCC--------CCCCC
Q 012949 230 LQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPV--------EGAIP 301 (452)
Q Consensus 230 ~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~--------~~r~d 301 (452)
++|++.+++.|++.+|+.++=+.++-+...+.=-++.|+-+.++++.+++.|+++.++|.. |..|. ..|-.
T Consensus 62 ~eDi~lm~~~G~~~~R~sisWsRi~P~g~~g~~n~~Gl~~y~~~id~l~~~GI~p~vtL~H-~d~P~~L~~~ggw~~r~~ 140 (464)
T 1wcg_A 62 KEDVAIIKDLNLKFYRFSISWARIAPSGVMNSLEPKGIAYYNNLINELIKNDIIPLVTMYH-WDLPQYLQDLGGWVNPIM 140 (464)
T ss_dssp HHHHHHHHHHTCSEEEEECCHHHHSTTSCTTSCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SCCBHHHHHTTGGGSTTH
T ss_pred HHHHHHHHHhCCCeEEecccHHHhCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCC-CCCCcchhhcCCCCChhH
Confidence 5799999999999999998554443221112224678999999999999999999888875 44443 22334
Q ss_pred HHHHHHHHHHHH
Q 012949 302 PSKVAYVAKELH 313 (452)
Q Consensus 302 ~e~l~~~a~~l~ 313 (452)
.+.++++|+.+.
T Consensus 141 ~~~f~~ya~~~~ 152 (464)
T 1wcg_A 141 SDYFKEYARVLF 152 (464)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 455555555444
No 473
>2j78_A Beta-glucosidase A; family 1, hydrolase, inhibitor, glycosidase, polysaccharide degradation, transition state mimic, carbohydrate metabolism; HET: GOX; 1.65A {Thermotoga maritima} SCOP: c.1.8.4 PDB: 1oif_A* 1oim_A* 1oin_A* 1od0_A* 1w3j_A* 1uz1_A* 2cbv_A* 2ces_A* 2cet_A* 2j75_A* 2j77_A* 2cbu_A* 2j79_A* 2j7b_A* 2j7c_A* 2j7d_A* 2j7e_A* 2j7f_A* 2j7g_A* 2j7h_A* ...
Probab=75.86 E-value=7.2 Score=40.67 Aligned_cols=83 Identities=12% Similarity=0.008 Sum_probs=57.7
Q ss_pred HHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCC--------CCCC
Q 012949 230 LQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVE--------GAIP 301 (452)
Q Consensus 230 ~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~--------~r~d 301 (452)
.+|++.+++.|++.+|+.++=+.++-+- .+.=-++.|+.+.++|+.+++.|+++.++|.. |+.|.. .+..
T Consensus 84 ~eDi~lm~~~G~~~~R~si~W~Ri~P~G-~g~~n~~gl~~yd~lid~l~~~GI~pivtL~H-~d~P~~l~~~ggw~~~~~ 161 (468)
T 2j78_A 84 KEDIEIIEKLGVKAYRFSISWPRILPEG-TGRVNQKGLDFYNRIIDTLLEKGITPFVTIYH-WDLPFALQLKGGWANREI 161 (468)
T ss_dssp HHHHHHHHHTTCCEEEEECCHHHHSTTS-SSCCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SCCBHHHHTTTGGGSTTH
T ss_pred HHHHHHHHHcCCCEEEeccCHHHhCCCC-CCCcCHHHHHHHHHHHHHHHhcCCEEEEEccC-CCCchhhhhcCCCCChHH
Confidence 4699999999999999988544443221 23334688999999999999999999988865 333321 2333
Q ss_pred HHHHHHHHHHHHH
Q 012949 302 PSKVAYVAKELHD 314 (452)
Q Consensus 302 ~e~l~~~a~~l~~ 314 (452)
.+.++++++.+.+
T Consensus 162 ~~~F~~ya~~~~~ 174 (468)
T 2j78_A 162 ADWFAEYSRVLFE 174 (468)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4556666655443
No 474
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=75.71 E-value=8.2 Score=35.77 Aligned_cols=71 Identities=15% Similarity=0.063 Sum_probs=52.9
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEeec
Q 012949 300 IPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCS 379 (452)
Q Consensus 300 ~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~S 379 (452)
.+++.+.++++.+.+.|++.|.+-.. +|. ..+.++.+++++|...++.. +. +-.-..-.|+++||+.|++.
T Consensus 25 ~~~~~~~~~~~al~~gGv~~iel~~k----~~~-~~~~i~~l~~~~~~~~vgag---tv-i~~d~~~~A~~aGAd~v~~p 95 (214)
T 1wbh_A 25 KKLEHAVPMAKALVAGGVRVLNVTLR----TEC-AVDAIRAIAKEVPEAIVGAG---TV-LNPQQLAEVTEAGAQFAISP 95 (214)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEESC----STT-HHHHHHHHHHHCTTSEEEEE---SC-CSHHHHHHHHHHTCSCEEES
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCC----Chh-HHHHHHHHHHHCcCCEEeeC---EE-EEHHHHHHHHHcCCCEEEcC
Confidence 46788899999999999999888765 232 35688888899987544332 32 33478889999999999743
No 475
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=75.70 E-value=5.6 Score=39.46 Aligned_cols=15 Identities=7% Similarity=-0.015 Sum_probs=7.7
Q ss_pred hhhHHHHHHHHHHHh
Q 012949 416 LRKLMLAGDFINKHL 430 (452)
Q Consensus 416 l~~L~~la~~v~~~~ 430 (452)
...+.++.+.+.+.+
T Consensus 197 P~~v~~lv~~l~~~~ 211 (337)
T 3ble_A 197 PEETFQGVDSLIQKY 211 (337)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhc
Confidence 344555555555544
No 476
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=75.68 E-value=9.7 Score=34.78 Aligned_cols=71 Identities=18% Similarity=0.147 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHCCcCEEEEcCCcCCC-cHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEee
Q 012949 304 KVAYVAKELHDMGCFEISLGDTIGVG-TPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDC 378 (452)
Q Consensus 304 ~l~~~a~~l~~~Gad~I~L~DT~G~~-~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~ 378 (452)
...++++.+.++|++.|.+.|..+.. ......++++.+++.+. ++|.+|.- .. -...+..++++||+.|..
T Consensus 34 ~~~~~a~~~~~~G~d~i~v~~~~~~~~~~~~~~~~i~~i~~~~~-ipvi~~g~--i~-~~~~~~~~~~~Gad~V~i 105 (253)
T 1h5y_A 34 DPVEMAVRYEEEGADEIAILDITAAPEGRATFIDSVKRVAEAVS-IPVLVGGG--VR-SLEDATTLFRAGADKVSV 105 (253)
T ss_dssp CHHHHHHHHHHTTCSCEEEEECCCCTTTHHHHHHHHHHHHHHCS-SCEEEESS--CC-SHHHHHHHHHHTCSEEEE
T ss_pred cHHHHHHHHHHcCCCEEEEEeCCccccCCcccHHHHHHHHHhcC-CCEEEECC--CC-CHHHHHHHHHcCCCEEEE
Confidence 45567777777888877777665432 12234566777777653 35555432 11 123456667778887764
No 477
>4hz8_A Beta-glucosidase; BGLB,BGL, hydrolase, glycosid barrel, carbohydrate/sugar binding; HET: BGC; 1.14A {Uncultured bacterium} PDB: 4hz7_A* 4hz6_A* 3fj0_A* 3cmj_A 3fiz_A* 3fiy_A*
Probab=75.46 E-value=5.3 Score=41.41 Aligned_cols=83 Identities=16% Similarity=0.040 Sum_probs=58.1
Q ss_pred cHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCC--------CCC
Q 012949 229 YLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVE--------GAI 300 (452)
Q Consensus 229 ~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~--------~r~ 300 (452)
+++|++.+++.|++.+|+.++=+-++-+. .+.=-++.++-+.++++.+++.|+++.++|.. |..|.. .+-
T Consensus 60 y~eDi~l~~~lG~~~~R~si~W~Ri~P~g-~g~~N~~gl~~Y~~lid~l~~~GI~p~vtL~H-~dlP~~L~~~GGW~nr~ 137 (444)
T 4hz8_A 60 YEQDLDLMRQLGLKTYRFSIAWARIQPDS-SRQINQRGLDFYRRLVEGLHKRDILPMATLYH-WDLPQWVEDEGGWLSRE 137 (444)
T ss_dssp HHHHHHHHHHHTCSEEEEECCHHHHSCST-TCCCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SCCBHHHHHTTGGGSTH
T ss_pred HHHHHHHHHhcCCCEEEEeccHHHcCcCC-CCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCC-CCCCHHHhhCcCCCChH
Confidence 35799999999999999988655443221 12234678999999999999999999988876 444431 233
Q ss_pred CHHHHHHHHHHHH
Q 012949 301 PPSKVAYVAKELH 313 (452)
Q Consensus 301 d~e~l~~~a~~l~ 313 (452)
..+.++++|+.+.
T Consensus 138 ~v~~F~~Ya~~~~ 150 (444)
T 4hz8_A 138 SASRFAEYTHALV 150 (444)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3455566665544
No 478
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=75.44 E-value=23 Score=38.47 Aligned_cols=140 Identities=11% Similarity=0.072 Sum_probs=83.4
Q ss_pred HhHHHHHHcCCCEEEEEecC--------ChHHH--hhhcCCCHHHHHHHHHHHHHHHHhC---CCcEEEEEEeeecCCCC
Q 012949 231 QGFEAAIAAGAKEVAIFASA--------SEAFS--KSNINCSIEDSLVRYRAVAHAAKVL---SIPVRGYVSCVVGCPVE 297 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~--------Sd~~~--~~~~~~s~e~~l~~~~~~v~~Ak~~---G~~V~~~l~~~~g~p~~ 297 (452)
+..++|.++|.|.|.|-.+- |+..+ ...+|-|.++=.+.+.++++.+|+. .+.|.+-|+..-..+..
T Consensus 153 ~aA~~a~~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~pv~vrls~~~~~~~~ 232 (729)
T 1o94_A 153 DAAKRSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDCAIATRFGVDTVYGPG 232 (729)
T ss_dssp HHHHHHHHTTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTSEEEEEEEEECSSCTT
T ss_pred HHHHHHHHcCCCEEEEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHhCCCceEEEEEccccCcCCC
Confidence 35567778999999986543 23222 2236778888888888888888874 45566556542100011
Q ss_pred CCCC-HHHHHHHHHHHHHCCcCEEEEcCCcCC-------CcH-----HH-HHHHHHHHHHhCCCccEEEEeCCCcCc-HH
Q 012949 298 GAIP-PSKVAYVAKELHDMGCFEISLGDTIGV-------GTP-----GT-VVPMLEAVMAVVPVEKLAVHLHDTYGQ-SL 362 (452)
Q Consensus 298 ~r~d-~e~l~~~a~~l~~~Gad~I~L~DT~G~-------~~P-----~~-v~~li~~l~~~~p~~~l~vH~Hnd~Gl-A~ 362 (452)
+ .+ .+...++++.+.+ ++|.|.+. .|. ..| .. ..++++.+++.+.. +|..=. |. -.
T Consensus 233 G-~~~~~~~~~~~~~l~~-~~d~~~v~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-pvi~~G----~i~~~ 303 (729)
T 1o94_A 233 Q-IEAEVDGQKFVEMADS-LVDMWDIT--IGDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVSKK-PVLGVG----RYTDP 303 (729)
T ss_dssp S-CCTTTHHHHHHHHHGG-GCSEEEEE--ECCSTTGGGTSCCTTTCCTTTTHHHHHHHHTTCSS-CEECCS----CCCCH
T ss_pred C-CCchHHHHHHHHHHHh-hcCEEEEe--eecccccccccCCccccCccccHHHHHHHHHHCCC-EEEEeC----CCCCH
Confidence 2 33 4567778888877 68877662 221 111 11 24677888887643 433211 22 24
Q ss_pred HHHHHHHHcC-CCEEeec
Q 012949 363 PNILISLQMG-ISTVDCS 379 (452)
Q Consensus 363 ANaLaAl~aG-a~~VD~S 379 (452)
..+..+++.| ||.|-..
T Consensus 304 ~~a~~~l~~g~aD~V~~g 321 (729)
T 1o94_A 304 EKMIEIVTKGYADIIGCA 321 (729)
T ss_dssp HHHHHHHHTTSCSBEEES
T ss_pred HHHHHHHHCCCCCEEEeC
Confidence 6678889988 8876544
No 479
>3gnp_A OS03G0212800 protein; beta-alpha barrel, glycosidase, hydrolase; HET: SOG; 1.80A {Oryza sativa subsp} PDB: 3gno_A* 3gnr_A*
Probab=75.42 E-value=5.4 Score=41.84 Aligned_cols=83 Identities=10% Similarity=0.041 Sum_probs=58.6
Q ss_pred cHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCC------C---CC
Q 012949 229 YLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPV------E---GA 299 (452)
Q Consensus 229 ~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~------~---~r 299 (452)
+++|++.+++.|++.+|+.++=+-++-+. .+.=-++.|+-+.++++.+++.|+++.++|.. |..|. . .+
T Consensus 72 Y~eDi~lm~elG~~~yRfsI~WsRI~P~g-~g~~N~~Gl~~Y~~lid~l~~~GI~P~vTL~H-~dlP~~L~~~yGGW~n~ 149 (488)
T 3gnp_A 72 FEEDIQLMADMGMDAYRFSIAWSRIYPNG-VGQVNQAGIDHYNKLIDALLAKGIQPYVTLYH-WDLPQALEDKYKGWLDR 149 (488)
T ss_dssp HHHHHHHHHHHTCCEEEEECCHHHHCTTS-SSSCCHHHHHHHHHHHHHHHHTTCEEEEEEES-SCCBHHHHHHHCGGGST
T ss_pred HHHHHHHHHHcCCCEEEecccHHHeeeCC-CCCcCHHHHHHHHHHHHHHHHCCCeEEEEeCC-CCCCHHHHHHhCCCCCH
Confidence 45799999999999999987655443221 13335789999999999999999999988886 44442 1 22
Q ss_pred CCHHHHHHHHHHHH
Q 012949 300 IPPSKVAYVAKELH 313 (452)
Q Consensus 300 ~d~e~l~~~a~~l~ 313 (452)
-..+.++++|+.+.
T Consensus 150 ~~v~~F~~Ya~~~~ 163 (488)
T 3gnp_A 150 QIVDDFAAYAETCF 163 (488)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 23455566665544
No 480
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=75.41 E-value=15 Score=39.54 Aligned_cols=140 Identities=12% Similarity=0.128 Sum_probs=82.3
Q ss_pred HhHHHHHHcCCCEEEEEec---------CChH--HHhhhcCCCHHHHHHHHHHHHHHHHhC-C--CcEEEEEEeeecCCC
Q 012949 231 QGFEAAIAAGAKEVAIFAS---------ASEA--FSKSNINCSIEDSLVRYRAVAHAAKVL-S--IPVRGYVSCVVGCPV 296 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s---------~Sd~--~~~~~~~~s~e~~l~~~~~~v~~Ak~~-G--~~V~~~l~~~~g~p~ 296 (452)
+..++|.++|.|.|.|-.+ .|+. +....+|-|.++=.+.+.++++.+|+. | +.|.+-|+..- ..
T Consensus 160 ~aA~~a~~aGfDgVeih~a~gy~L~~qFlsp~~N~R~D~yGGs~enR~r~~~ei~~avr~~~g~~~~v~~r~s~~~--~~ 237 (690)
T 3k30_A 160 NAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECAGRAAVACRITVEE--EI 237 (690)
T ss_dssp HHHHHHHHHTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTSSEEEEEEECCC--CS
T ss_pred HHHHHHHHcCCCEEEEcccccchHHHHhCCCccCCCccccCCCHHHHHHHHHHHHHHHHHHhCCCceEEEEECccc--cC
Confidence 3556778899999888432 1221 122235778887777788888887764 3 44554454321 11
Q ss_pred CCCCCHHHHHHHHHHHHHCCcCEEEEcCCc-------CCCcH-HHHHHHHHHHHHhCCCccEEEEe-CCCcCcHHHHHHH
Q 012949 297 EGAIPPSKVAYVAKELHDMGCFEISLGDTI-------GVGTP-GTVVPMLEAVMAVVPVEKLAVHL-HDTYGQSLPNILI 367 (452)
Q Consensus 297 ~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~-------G~~~P-~~v~~li~~l~~~~p~~~l~vH~-Hnd~GlA~ANaLa 367 (452)
.+-.+.+...++++.+.+ ++|.|.+.-.. ....| ....++++.+++.+.. +|-.=. -++ ...+..
T Consensus 238 ~~g~~~~~~~~~~~~l~~-~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-pvi~~G~i~~----~~~a~~ 311 (690)
T 3k30_A 238 DGGITREDIEGVLRELGE-LPDLWDFAMGSWEGDSVTSRFAPEGRQEEFVAGLKKLTTK-PVVGVGRFTS----PDAMVR 311 (690)
T ss_dssp TTSCCHHHHHHHHHHHTT-SSSEEEEECSCHHHHTCCTTTCCTTTTHHHHTTSGGGCSS-CEEECSCCCC----HHHHHH
T ss_pred CCCCCHHHHHHHHHHHHh-hcCEEEEecccccccCCCCccCCccccHHHHHHHHHHcCC-eEEEeCCCCC----HHHHHH
Confidence 223567888899999988 78988774210 00111 1123567777777653 443221 111 456678
Q ss_pred HHHcC-CCEEee
Q 012949 368 SLQMG-ISTVDC 378 (452)
Q Consensus 368 Al~aG-a~~VD~ 378 (452)
+++.| ||.|-.
T Consensus 312 ~l~~g~~d~v~~ 323 (690)
T 3k30_A 312 QIKAGILDLIGA 323 (690)
T ss_dssp HHHTTSCSEEEE
T ss_pred HHHCCCcceEEE
Confidence 88888 887643
No 481
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=75.41 E-value=4 Score=37.75 Aligned_cols=72 Identities=15% Similarity=0.049 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEeec
Q 012949 304 KVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDCS 379 (452)
Q Consensus 304 ~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~S 379 (452)
...++++.+.+.|++.|.+.|..|...+....++++.+++.+. +||.+|.--.. ...+..++++||+.|...
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~~~~~i~~i~~~~~-ipv~v~ggi~~---~~~~~~~l~~Gad~V~lg 103 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDAAFGRGSNHELLAEVVGKLD-VQVELSGGIRD---DESLAAALATGCARVNVG 103 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHHHTTSCCCHHHHHHHHHHCS-SEEEEESSCCS---HHHHHHHHHTTCSEEEEC
T ss_pred CHHHHHHHHHHcCCCEEEEEcCcccccCCChHHHHHHHHHhcC-CcEEEECCCCC---HHHHHHHHHcCCCEEEEC
Confidence 3456777888889998888775443222111177888887764 46766643321 234667777888877543
No 482
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=75.31 E-value=23 Score=33.47 Aligned_cols=120 Identities=13% Similarity=0.196 Sum_probs=64.7
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCc-EEEEEEeeecCCCCCCCC--------
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIP-VRGYVSCVVGCPVEGAIP-------- 301 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~-V~~~l~~~~g~p~~~r~d-------- 301 (452)
+.++.+.+.|.+.|.++......... ...+ + +.+.++.+.+++.|+. +.+...+.+ ...+ .+
T Consensus 22 ~~l~~~~~~G~~~vEl~~~~~~~~~~--~~~~-~---~~~~~~~~~l~~~gl~~~~~h~~~~~--nl~s-~d~~~~r~~~ 92 (303)
T 3aal_A 22 AASEEAASYGANTFMIYTGAPQNTKR--KSIE-E---LNIEAGRQHMQAHGIEEIVVHAPYII--NIGN-TTNLDTFSLG 92 (303)
T ss_dssp HHHHHHHHTTCSEEEEESSCTTCCCC--CCSG-G---GCHHHHHHHHHHTTCCEEEEECCTTC--CTTC-SSCHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEcCCCCCccCC--CCCC-H---HHHHHHHHHHHHcCCceEEEeccccc--cCCC-CCcHHHHHHH
Confidence 46788999999999996432110000 0000 1 1234555677888984 432111100 0011 12
Q ss_pred HHHHHHHHHHHHHCCcCEEEEc-CC-cCCCcHHHHHHHHHHHHHhC---CCccEEEEeCCCcC
Q 012949 302 PSKVAYVAKELHDMGCFEISLG-DT-IGVGTPGTVVPMLEAVMAVV---PVEKLAVHLHDTYG 359 (452)
Q Consensus 302 ~e~l~~~a~~l~~~Gad~I~L~-DT-~G~~~P~~v~~li~~l~~~~---p~~~l~vH~Hnd~G 359 (452)
.+.+.+.++.+.++|++.|.+- -. .+.........+++.+++.. .++.|.++.|+..+
T Consensus 93 ~~~~~~~i~~A~~lGa~~vv~h~g~~~~~~~~~~~~~~~~~l~~l~~~a~gv~l~lEn~~~~~ 155 (303)
T 3aal_A 93 VDFLRAEIERTEAIGAKQLVLHPGAHVGAGVEAGLRQIIRGLNEVLTREQNVQIALETMAGKG 155 (303)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCEECTTSCHHHHHHHHHHHHHHHCCSSCSCEEEEECCCCCT
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCcCCCCCHHHHHHHHHHHHHHHHHhCCCCEEEEecCCCCC
Confidence 3455667777888899988762 11 12223345556666666543 35688898886543
No 483
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=75.17 E-value=30 Score=32.67 Aligned_cols=141 Identities=13% Similarity=0.103 Sum_probs=85.5
Q ss_pred hHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhC-CCcEEEEEEeeecCCCCCCCCHHHHHHHHH
Q 012949 232 GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVL-SIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 310 (452)
Q Consensus 232 ~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~-G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~ 310 (452)
-++.|.+.|++-|-+.-. .+ .+. +..+.. ++++. .+.|+|.. ..+.+....-++
T Consensus 41 l~~~a~~~~~~aVcv~p~----------------~v-~a~---~~l~~~~~v~v~----tvigFP~G-~~~~~~k~~e~~ 95 (234)
T 1n7k_A 41 LVREASDYGFRCAVLTPV----------------YT-VKI---SGLAEKLGVKLC----SVIGFPLG-QAPLEVKLVEAQ 95 (234)
T ss_dssp HHHHHHHHTCSEEEECHH----------------HH-HHH---HHHHHHHTCCEE----EEESTTTC-CSCHHHHHHHHH
T ss_pred HHHHHHHhCCCEEEEchH----------------Hh-eee---hHhCCCCCceEE----EEeCCCCC-CCcHHHHHHHHH
Confidence 567788889887775421 12 222 222333 55554 33456654 455666667778
Q ss_pred HHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCC--cc----EEEEeCCCcCcHHHHHHHHHHcCCCEEeecccCCC
Q 012949 311 ELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPV--EK----LAVHLHDTYGQSLPNILISLQMGISTVDCSVAGLG 384 (452)
Q Consensus 311 ~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~--~~----l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~Sv~GlG 384 (452)
.+.+.|||.|-+.=-+|...- .+.+-+..+++..+. .+ |+....++- .=.-.+..|.++|||+|=++-+ .+
T Consensus 96 ~Av~~GAdEID~vinig~~~~-~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~~e-~i~~a~ria~eaGADfVKTsTG-~~ 172 (234)
T 1n7k_A 96 TVLEAGATELDVVPHLSLGPE-AVYREVSGIVKLAKSYGAVVKVILEAPLWDDK-TLSLLVDSSRRAGADIVKTSTG-VY 172 (234)
T ss_dssp HHHHHTCCEEEECCCGGGCHH-HHHHHHHHHHHHHHHTTCEEEEECCGGGSCHH-HHHHHHHHHHHTTCSEEESCCS-SS
T ss_pred HHHHcCCCEEEEeccchHHHH-HHHHHHHHHHHHHhhcCCeEEEEEeccCCCHH-HHHHHHHHHHHhCCCEEEeCCC-CC
Confidence 888999999998877887766 777777777765321 23 222222332 2223566788999999999853 21
Q ss_pred CCCCCCCCCCcccHHHHHH--HHHc
Q 012949 385 GCPYAKGASGNVATEDVVY--MLSG 407 (452)
Q Consensus 385 ecP~a~graGNaalE~vv~--~L~~ 407 (452)
.+|++..|++-. +.+.
T Consensus 173 -------~~~gAt~~dv~l~~m~~~ 190 (234)
T 1n7k_A 173 -------TKGGDPVTVFRLASLAKP 190 (234)
T ss_dssp -------CCCCSHHHHHHHHHHHGG
T ss_pred -------CCCCCCHHHHHHHHHHHH
Confidence 124577777665 5543
No 484
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=75.17 E-value=23 Score=33.85 Aligned_cols=63 Identities=24% Similarity=0.183 Sum_probs=46.6
Q ss_pred HHHHhC-CCcEEEEEEeeecCCCCCCCCHHHHHHHHHHHHHCCcC--EEE--------EcCCcCCCcHHHHHHHHHHHHH
Q 012949 275 HAAKVL-SIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCF--EIS--------LGDTIGVGTPGTVVPMLEAVMA 343 (452)
Q Consensus 275 ~~Ak~~-G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad--~I~--------L~DT~G~~~P~~v~~li~~l~~ 343 (452)
...|+. |++|.+ .++++.-..+++..+++++...|++ .|- ++|..=.+.|+++.+|++.+++
T Consensus 185 ~~lk~~~~~pVi~-------d~sH~~g~~~~v~~~~~aAva~Ga~Gl~iE~H~~~d~al~D~~~sl~p~~~~~l~~~i~~ 257 (262)
T 1zco_A 185 PVVKELSHLPIIV-------DPSHPAGRRSLVIPLAKAAYAIGADGIMVEVHPEPEKALSDSQQQLTFDDFLQLLKELEA 257 (262)
T ss_dssp HHHHHHBSSCEEE-------CSSTTTCSGGGHHHHHHHHHHTTCSEEEEEBCSSGGGCSSCTTTCBCHHHHHHHHHHHHH
T ss_pred HHHHhhhCCCEEE-------EcCCCCCccchHHHHHHHHHHcCCCEEEEEecCCccccCChhhcCCCHHHHHHHHHHHHH
Confidence 334444 787642 3455544566777888889999999 554 5699999999999999999986
Q ss_pred h
Q 012949 344 V 344 (452)
Q Consensus 344 ~ 344 (452)
.
T Consensus 258 ~ 258 (262)
T 1zco_A 258 L 258 (262)
T ss_dssp T
T ss_pred H
Confidence 3
No 485
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=75.04 E-value=11 Score=34.74 Aligned_cols=113 Identities=11% Similarity=-0.027 Sum_probs=62.0
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCC-----CCHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGA-----IPPSKV 305 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r-----~d~e~l 305 (452)
+.++.+.++|.+.|.+...-.... . .-..+.++.+.+++.|+++.. +... ....+. ...+.+
T Consensus 20 ~~l~~~~~~G~~~vEl~~~~~~~~--------~--~~~~~~~~~~~l~~~gl~~~~-~~~~--~~~~~~~~~~~~~~~~~ 86 (281)
T 3u0h_A 20 LYLDLARETGYRYVDVPFHWLEAE--------A--ERHGDAAVEAMFQRRGLVLAN-LGLP--LNLYDSEPVFLRELSLL 86 (281)
T ss_dssp HHHHHHHHTTCSEECCCHHHHHHH--------H--HHHCHHHHHHHHHTTTCEECC-EECC--SCTTSCHHHHHHHHHTH
T ss_pred HHHHHHHHcCCCEEEecHHHHHHH--------h--cccCHHHHHHHHHHcCCceEE-eccc--ccccCCCHHHHHHHHHH
Confidence 478899999999999875321000 0 012245667788899998742 2211 111111 012345
Q ss_pred HHHHHHHHHCCcCEEEEcCCcCCCc-H-HHHHHHHHHHHHh---C--CCccEEEEeCC
Q 012949 306 AYVAKELHDMGCFEISLGDTIGVGT-P-GTVVPMLEAVMAV---V--PVEKLAVHLHD 356 (452)
Q Consensus 306 ~~~a~~l~~~Gad~I~L~DT~G~~~-P-~~v~~li~~l~~~---~--p~~~l~vH~Hn 356 (452)
.+.++.+.++|++.|.+.=.-|... + .....+++.+++. . -++.|.+|.|+
T Consensus 87 ~~~i~~A~~lG~~~v~~~~~p~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~ 144 (281)
T 3u0h_A 87 PDRARLCARLGARSVTAFLWPSMDEEPVRYISQLARRIRQVAVELLPLGMRVGLEYVG 144 (281)
T ss_dssp HHHHHHHHHTTCCEEEEECCSEESSCHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCC
T ss_pred HHHHHHHHHcCCCEEEEeecCCCCCcchhhHHHHHHHHHHHHHHHHHcCCEEEEEecc
Confidence 6678888899999887421111111 2 2333344443332 1 24689999997
No 486
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=74.95 E-value=46 Score=33.20 Aligned_cols=96 Identities=11% Similarity=0.168 Sum_probs=60.1
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhccCCceeEEecchhhhhhhhhhhhhccchhhh
Q 012949 144 TVPTGVKVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVIS 223 (452)
Q Consensus 144 ~~~~~~k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~ 223 (452)
.++.++-+++++.|.+.|+..||=.. .+ .|. +-+..+++..++.+ ..-.. +
T Consensus 204 ~~~~~~A~~~~~~l~~~~i~~iEqP~--~~------~d~-~~~~~l~~~~~iPI--a~dE~---~--------------- 254 (383)
T 3i4k_A 204 RWDRRTALHYLPILAEAGVELFEQPT--PA------DDL-ETLREITRRTNVSV--MADES---V--------------- 254 (383)
T ss_dssp CSCHHHHHHHHHHHHHTTCCEEESCS--CT------TCH-HHHHHHHHHHCCEE--EESTT---C---------------
T ss_pred CCCHHHHHHHHHHHHhcCCCEEECCC--Ch------hhH-HHHHHHHhhCCCCE--EecCc---c---------------
Confidence 47889999999999999999999632 11 132 33455554333322 22110 0
Q ss_pred hhhhccHHhHHHHHHcC-CCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEE
Q 012949 224 SNLWVYLQGFEAAIAAG-AKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVR 285 (452)
Q Consensus 224 ~~~~~~~~~ie~a~~~G-i~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~ 285 (452)
....+++.+++.| ++.|.+=.... -.+....+++..|+++|+.+.
T Consensus 255 ----~~~~~~~~~i~~~~~d~v~~k~~~~-------------GGit~~~~ia~~A~~~gi~~~ 300 (383)
T 3i4k_A 255 ----WTPAEALAVVKAQAADVIALKTTKH-------------GGLLESKKIAAIAEAGGLACH 300 (383)
T ss_dssp ----SSHHHHHHHHHHTCCSEEEECTTTT-------------TSHHHHHHHHHHHHHTTCEEE
T ss_pred ----CCHHHHHHHHHcCCCCEEEEccccc-------------CCHHHHHHHHHHHHHcCCeEE
Confidence 1234777777766 67777643211 135666788899999999875
No 487
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=74.95 E-value=8.5 Score=38.03 Aligned_cols=77 Identities=19% Similarity=0.265 Sum_probs=49.1
Q ss_pred CCCC-CHHHHHHHHHHHHHCCcCEEEEcC-Cc--CCCc---HHH---HHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHH
Q 012949 297 EGAI-PPSKVAYVAKELHDMGCFEISLGD-TI--GVGT---PGT---VVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNIL 366 (452)
Q Consensus 297 ~~r~-d~e~l~~~a~~l~~~Gad~I~L~D-T~--G~~~---P~~---v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaL 366 (452)
.+++ +++...+.++.+.+.||+.|-+.= ++ |.-. -++ +..+|+.+++.. +++|.+ ||+--. -+.
T Consensus 26 gg~~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~-~vpiSI---DT~~~~--Va~ 99 (314)
T 2vef_A 26 GGQFFALEQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKES-DVLISI---DTWKSQ--VAE 99 (314)
T ss_dssp ----CHHHHHHHHHHHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHHC-CCEEEE---ECSCHH--HHH
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhC-CceEEE---eCCCHH--HHH
Confidence 3454 678889999999999999998864 22 2100 134 445556677665 457777 555544 456
Q ss_pred HHHHcCCCEEeec
Q 012949 367 ISLQMGISTVDCS 379 (452)
Q Consensus 367 aAl~aGa~~VD~S 379 (452)
+|+++|+++|+--
T Consensus 100 aAl~aGa~iINDV 112 (314)
T 2vef_A 100 AALAAGADLVNDI 112 (314)
T ss_dssp HHHHTTCCEEEET
T ss_pred HHHHcCCCEEEEC
Confidence 8999999999643
No 488
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=74.94 E-value=27 Score=34.17 Aligned_cols=127 Identities=11% Similarity=0.050 Sum_probs=78.1
Q ss_pred CHHHHHHHHHHHHHCCcCEEEEc-CCcCCCcHHHHHHHHHHHHH--hCCCccEEEEeCCCcCcHHHHHHHHHH--cCCCE
Q 012949 301 PPSKVAYVAKELHDMGCFEISLG-DTIGVGTPGTVVPMLEAVMA--VVPVEKLAVHLHDTYGQSLPNILISLQ--MGIST 375 (452)
Q Consensus 301 d~e~l~~~a~~l~~~Gad~I~L~-DT~G~~~P~~v~~li~~l~~--~~p~~~l~vH~Hnd~GlA~ANaLaAl~--aGa~~ 375 (452)
+++.+.+.++.+.+.||+.|-+. +...+-.++++.+++..+.. ...+++|.+=. +- ..-+.+|++ +|+++
T Consensus 35 ~~~~a~~~A~~~v~~GAdiIDIg~g~~~v~~~eem~rvv~~i~~~~~~~~vpisIDT---~~--~~V~eaaL~~~~Ga~i 109 (300)
T 3k13_A 35 KYDEALSIARQQVEDGALVIDVNMDDGLLDARTEMTTFLNLIMSEPEIARVPVMIDS---SK--WEVIEAGLKCLQGKSI 109 (300)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCCTTSCHHHHHHHHHHHHHTCHHHHTSCEEEEC---SC--HHHHHHHHHHCSSCCE
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHhhhcCCCeEEEeC---CC--HHHHHHHHHhcCCCCE
Confidence 67889999999999999988876 44445556778888888763 12345677744 32 345577888 89998
Q ss_pred EeecccCCCCCCCCCCCCCcccHHHHHHHHHcCCCC----------CCCChhhHHHHHHHHHHH--hCCCCCCCccccc
Q 012949 376 VDCSVAGLGGCPYAKGASGNVATEDVVYMLSGLGVE----------TNVDLRKLMLAGDFINKH--LGRPSGSKTAIAL 442 (452)
Q Consensus 376 VD~Sv~GlGecP~a~graGNaalE~vv~~L~~~Gi~----------t~iDl~~L~~la~~v~~~--~g~~~p~~~pi~G 442 (452)
|+---++- |-...++++....++|.. ..-+++.-.++++.+.+. ...-+++..-++-
T Consensus 110 INdIs~~~----------~d~~~~~~~~l~a~~ga~vV~mh~d~~G~p~t~~~~~~i~~r~~~~~~~~~Gi~~~~IilD 178 (300)
T 3k13_A 110 VNSISLKE----------GEEVFLEHARIIKQYGAATVVMAFDEKGQADTAARKIEVCERAYRLLVDKVGFNPHDIIFD 178 (300)
T ss_dssp EEEECSTT----------CHHHHHHHHHHHHHHTCEEEEESEETTEECCSHHHHHHHHHHHHHHHHHHTCCCGGGEEEE
T ss_pred EEeCCccc----------CChhHHHHHHHHHHhCCeEEEEeeCCCCCCCCHHHHHHHHHHHHHHHHHHcCCCHHHEEEe
Confidence 86543322 335555666655543321 123355555666666555 3344455544443
No 489
>1pbg_A PGAL, 6-phospho-beta-D-galactosidase; hydrolase (glycosyl hydrolase); 2.30A {Lactococcus lactis} SCOP: c.1.8.4 PDB: 3pbg_A 2pbg_A 4pbg_A*
Probab=74.77 E-value=5.7 Score=41.39 Aligned_cols=64 Identities=14% Similarity=0.069 Sum_probs=49.3
Q ss_pred HHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCC
Q 012949 230 LQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCP 295 (452)
Q Consensus 230 ~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p 295 (452)
++|++.+++.|++.+|+.++=+.++-+- .+.=-++.++-+.++++.+++.|+++.++|.. |+.|
T Consensus 57 ~eDi~lm~~~G~~~~R~sisWsRi~P~G-~g~~N~~gl~~y~~lid~l~~~GI~p~vtL~H-~d~P 120 (468)
T 1pbg_A 57 PVDLELAEEYGVNGIRISIAWSRIFPTG-YGEVNEKGVEFYHKLFAECHKRHVEPFVTLHH-FDTP 120 (468)
T ss_dssp HHHHHHHHHTTCCEEEEECCHHHHSTTS-SSSCCHHHHHHHHHHHHHHHHHTCEEEEEEES-SCCB
T ss_pred HHHHHHHHHhCCCEEEeccCHhhhccCC-CCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCC-CccC
Confidence 5799999999999999998644443221 12234678999999999999999999988875 4455
No 490
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=74.52 E-value=43 Score=36.31 Aligned_cols=119 Identities=13% Similarity=0.011 Sum_probs=74.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEEEeeecC-------------CCC------CCCC------------HHHHHHHHHH
Q 012949 263 IEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGC-------------PVE------GAIP------------PSKVAYVAKE 311 (452)
Q Consensus 263 ~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~-------------p~~------~r~d------------~e~l~~~a~~ 311 (452)
.++.++..+++++.+++.|.++.+.|... |- |-+ .... .+.+.+.|+.
T Consensus 79 ~~~~~~~~~~~~~~vh~~g~~i~~Ql~h~-Gr~~~~~~~~~~~~~ps~~~~~~~~~~~p~~~t~~eI~~~i~~f~~aA~~ 157 (729)
T 1o94_A 79 DEGDVRNLKAMTDEVHKYGALAGVELWYG-GAHAPNMESRATPRGPSQYASEFETLSYCKEMDLSDIAQVQQFYVDAAKR 157 (729)
T ss_dssp SHHHHHHHHHHHHHHHTTTCEEEEEEECC-GGGSCCTTTCCCCEESSCCBCSSSTTCBCEECCHHHHHHHHHHHHHHHHH
T ss_pred ChHHhHHHHHHHHHHHhCCCeEEEEecCC-CccccccccCCCCcCCCcccccccCCCCCCcCCHHHHHHHHHHHHHHHHH
Confidence 35667777888888999999887777652 10 000 0001 2566778888
Q ss_pred HHHCCcCEEEEc-------------------CCcCCCc---HHHHHHHHHHHHHhCC-CccEEEEeC-----CCcCcH--
Q 012949 312 LHDMGCFEISLG-------------------DTIGVGT---PGTVVPMLEAVMAVVP-VEKLAVHLH-----DTYGQS-- 361 (452)
Q Consensus 312 l~~~Gad~I~L~-------------------DT~G~~~---P~~v~~li~~l~~~~p-~~~l~vH~H-----nd~GlA-- 361 (452)
+.++|.|.|.|- |-.|... +.-+.++++++++.++ +.+|.+-.- ++-|+.
T Consensus 158 a~~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~pv~vrls~~~~~~~~G~~~~ 237 (729)
T 1o94_A 158 SRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDCAIATRFGVDTVYGPGQIEAE 237 (729)
T ss_dssp HHHTTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTSEEEEEEEEECSSCTTSCCTT
T ss_pred HHHcCCCEEEEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHhCCCceEEEEEccccCcCCCCCCch
Confidence 899999988883 4445432 2337888999999885 445665441 112332
Q ss_pred --HHHHHHHHHcCCCEEeecccC
Q 012949 362 --LPNILISLQMGISTVDCSVAG 382 (452)
Q Consensus 362 --~ANaLaAl~aGa~~VD~Sv~G 382 (452)
......+++.|++.++++..+
T Consensus 238 ~~~~~~~~~l~~~~d~~~v~~g~ 260 (729)
T 1o94_A 238 VDGQKFVEMADSLVDMWDITIGD 260 (729)
T ss_dssp THHHHHHHHHGGGCSEEEEEECC
T ss_pred HHHHHHHHHHHhhcCEEEEeeec
Confidence 122344556689999988765
No 491
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=74.50 E-value=9.8 Score=35.58 Aligned_cols=70 Identities=11% Similarity=0.052 Sum_probs=52.5
Q ss_pred CCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEee
Q 012949 300 IPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDC 378 (452)
Q Consensus 300 ~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~ 378 (452)
.+++.+.++++++.+.|++.|.+-.. +| ...+.++.+++.+|...++... -+ -....-.|+++||+.|.+
T Consensus 26 ~~~~~~~~~~~al~~gGv~~iel~~k----~~-~~~~~i~~l~~~~~~l~vgaGt--vl--~~d~~~~A~~aGAd~v~~ 95 (224)
T 1vhc_A 26 DNADDILPLADTLAKNGLSVAEITFR----SE-AAADAIRLLRANRPDFLIAAGT--VL--TAEQVVLAKSSGADFVVT 95 (224)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEETT----ST-THHHHHHHHHHHCTTCEEEEES--CC--SHHHHHHHHHHTCSEEEC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecc----Cc-hHHHHHHHHHHhCcCcEEeeCc--Ee--eHHHHHHHHHCCCCEEEE
Confidence 46778889999999999999888764 23 2356788889999875444432 22 237888999999999964
No 492
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=74.50 E-value=67 Score=32.19 Aligned_cols=128 Identities=12% Similarity=0.114 Sum_probs=66.1
Q ss_pred HHHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhcc-CCceeEEecchhhhhhhhhhhhhccchhhhhhhhc
Q 012949 150 KVELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLE-GARLPVLTPNLKVILQRSILFQQCHASVISSNLWV 228 (452)
Q Consensus 150 k~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~-~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~~ 228 (452)
..+.++.+.+.|++.|++..... .| ....++++.+++.. +. ++++.+..
T Consensus 154 ~~~~a~~~~~~G~d~i~i~~~~g---~~--~~~~e~i~~ir~~~~~~--pviv~~v~----------------------- 203 (404)
T 1eep_A 154 TIERVEELVKAHVDILVIDSAHG---HS--TRIIELIKKIKTKYPNL--DLIAGNIV----------------------- 203 (404)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCC---SS--HHHHHHHHHHHHHCTTC--EEEEEEEC-----------------------
T ss_pred HHHHHHHHHHCCCCEEEEeCCCC---Ch--HHHHHHHHHHHHHCCCC--eEEEcCCC-----------------------
Confidence 35566778899999999842111 11 11234445555433 33 33332211
Q ss_pred cHHhHHHHHHcCCCEEEEEecC---ChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHH
Q 012949 229 YLQGFEAAIAAGAKEVAIFASA---SEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKV 305 (452)
Q Consensus 229 ~~~~ie~a~~~Gi~~V~i~~s~---Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l 305 (452)
..++++.+.++|+|.|.+-... .......+.+... ++.+..+.+.++..+++|.+ +.+-.+++.+
T Consensus 204 ~~~~a~~a~~~Gad~I~vg~~~G~~~~~~~~~~~g~p~---~~~l~~v~~~~~~~~ipVia---------~GGI~~~~d~ 271 (404)
T 1eep_A 204 TKEAALDLISVGADCLKVGIGPGSICTTRIVAGVGVPQ---ITAICDVYEACNNTNICIIA---------DGGIRFSGDV 271 (404)
T ss_dssp SHHHHHHHHTTTCSEEEECSSCSTTSHHHHHHCCCCCH---HHHHHHHHHHHTTSSCEEEE---------ESCCCSHHHH
T ss_pred cHHHHHHHHhcCCCEEEECCCCCcCcCccccCCCCcch---HHHHHHHHHHHhhcCceEEE---------ECCCCCHHHH
Confidence 2347888999999999882110 0111112223222 23333444444445666641 2344566666
Q ss_pred HHHHHHHHHCCcCEEEEc
Q 012949 306 AYVAKELHDMGCFEISLG 323 (452)
Q Consensus 306 ~~~a~~l~~~Gad~I~L~ 323 (452)
.+.. .+||+.+.+.
T Consensus 272 ~~al----a~GAd~V~iG 285 (404)
T 1eep_A 272 VKAI----AAGADSVMIG 285 (404)
T ss_dssp HHHH----HHTCSEEEEC
T ss_pred HHHH----HcCCCHHhhC
Confidence 6544 3599888774
No 493
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=74.25 E-value=19 Score=33.80 Aligned_cols=201 Identities=13% Similarity=0.048 Sum_probs=105.6
Q ss_pred HHHHHHHHHHHCCCCEEEEecC-CCCCcccccCCHHHHHHHHHhccCCceeEEecchhhhhhhhhhhhhccchhhhhhhh
Q 012949 149 VKVELIRRLVSSGLPVVEATSF-VSPKWVPQLADARDVMEAVRDLEGARLPVLTPNLKVILQRSILFQQCHASVISSNLW 227 (452)
Q Consensus 149 ~k~~i~~~L~~~Gv~~IEvG~~-~s~~~~p~~~D~e~v~~~i~~~~~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~ 227 (452)
+-+++++...+.|++.+=+==. .+....+ .+ .++++.+.+-....+++- -+.+
T Consensus 32 dP~~~a~~~~~~gad~lhvvDld~a~~~~~--~~-~~~i~~i~~~~~~pl~vG-GGIr---------------------- 85 (243)
T 4gj1_A 32 NPLKKFKEYEKAGAKELHLVDLTGAKDPSK--RQ-FALIEKLAKEVSVNLQVG-GGIR---------------------- 85 (243)
T ss_dssp CHHHHHHHHHHHTCCEEEEEEHHHHHCGGG--CC-HHHHHHHHHHCCSEEEEE-SSCC----------------------
T ss_pred CHHHHHHHHHHCCCCEEEEEecCcccccch--hH-HHHHHHHHHhcCCCeEec-cccc----------------------
Confidence 4567888899999987765210 0000001 12 234555544344444421 1221
Q ss_pred ccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCc-EEEEEEeeecC-----CCCCC-C
Q 012949 228 VYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIP-VRGYVSCVVGC-----PVEGA-I 300 (452)
Q Consensus 228 ~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~-V~~~l~~~~g~-----p~~~r-~ 300 (452)
..++++..+++|++.|-+-..+-. +-.-+-+.+++.|-. +.+.|-..... -..++ .
T Consensus 86 -s~e~~~~~l~~GadkVii~t~a~~----------------~p~li~e~~~~~g~q~iv~~iD~~~~~~~~v~~~gw~~~ 148 (243)
T 4gj1_A 86 -SKEEVKALLDCGVKRVVIGSMAIK----------------DATLCLEILKEFGSEAIVLALDTILKEDYVVAVNAWQEA 148 (243)
T ss_dssp -CHHHHHHHHHTTCSEEEECTTTTT----------------CHHHHHHHHHHHCTTTEEEEEEEEESSSEEEC-------
T ss_pred -cHHHHHHHHHcCCCEEEEcccccc----------------CCchHHHHHhcccCceEEEEEEEEeCCCCEEEecCceec
Confidence 235899999999999887643211 111122345555543 33333321100 00111 1
Q ss_pred CHHHHHHHHHHHHHCCcCEEEEc--CCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCCcCcHHHHHHHHHHcCCCEEee
Q 012949 301 PPSKVAYVAKELHDMGCFEISLG--DTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDTYGQSLPNILISLQMGISTVDC 378 (452)
Q Consensus 301 d~e~l~~~a~~l~~~Gad~I~L~--DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd~GlA~ANaLaAl~aGa~~VD~ 378 (452)
+.-.+.++++.+.+.|+.+|.+- |.-|.+.-..+ ++++.+.+.+|.+|+-... |.+...=+..+..+++ +
T Consensus 149 ~~~~~~~~~~~~~~~g~~eil~t~Id~DGt~~G~d~-~l~~~l~~~~~~ipviasG----Gv~~~~Dl~~l~~~~~---g 220 (243)
T 4gj1_A 149 SDKKLMEVLDFYSNKGLKHILCTDISKDGTMQGVNV-RLYKLIHEIFPNICIQASG----GVASLKDLENLKGICS---G 220 (243)
T ss_dssp -CCBHHHHHHHHHTTTCCEEEEEETTC-----CCCH-HHHHHHHHHCTTSEEEEES----CCCSHHHHHHTTTTCS---E
T ss_pred ccchHHHHHHHHhhcCCcEEEeeeecccccccCCCH-HHHHHHHHhcCCCCEEEEc----CCCCHHHHHHHHccCc---h
Confidence 12235678888899999988885 66777776655 4778888888876776553 4444455566666643 4
Q ss_pred cccCCCCCCCCCCCCCcccHHHHHHHHH
Q 012949 379 SVAGLGGCPYAKGASGNVATEDVVYMLS 406 (452)
Q Consensus 379 Sv~GlGecP~a~graGNaalE~vv~~L~ 406 (452)
.+.|-.= -.|..+++|++..|.
T Consensus 221 vivg~Al------~~g~i~l~ea~~~l~ 242 (243)
T 4gj1_A 221 VIVGKAL------LDGVFSVEEGIRCLA 242 (243)
T ss_dssp EEECHHH------HTTSSCHHHHHHHHC
T ss_pred hehHHHH------HCCCCCHHHHHHHhh
Confidence 4443211 256788888877663
No 494
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A
Probab=74.17 E-value=5 Score=38.63 Aligned_cols=60 Identities=10% Similarity=-0.052 Sum_probs=43.1
Q ss_pred HHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEE
Q 012949 230 LQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVS 289 (452)
Q Consensus 230 ~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~ 289 (452)
.++++.+++.|+..||+.++-+.+.-...-+.-.++.++.+.++|+.|++.|+.|...+-
T Consensus 34 ~~di~~~~~~G~n~vRi~i~w~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~gi~vild~h 93 (305)
T 1h1n_A 34 PNTIDTLISKGMNIFRVPFMMERLVPNSMTGSPDPNYLADLIATVNAITQKGAYAVVDPH 93 (305)
T ss_dssp HHHHHHHHHTTCCEEEEEECHHHHSCSSTTSCCCHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHCCCCEEEecccHHHcCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEecc
Confidence 468999999999999998863221100111222367899999999999999999876553
No 495
>2xed_A Putative maleate isomerase; nicotinic acid catabolism, cofactor-independent CIS-trans isomerase; 1.95A {Nocardia farcinica} PDB: 2xec_A
Probab=74.11 E-value=30 Score=32.98 Aligned_cols=148 Identities=16% Similarity=0.075 Sum_probs=82.2
Q ss_pred ccEEEeCCccccCCCCCCCCCHHHH-------HHHHHHHHHCCCCEEEEecCCCCCcccccCCHHHHHHHHHhcc-----
Q 012949 126 FVKIVEVGPRDGLQNEKNTVPTGVK-------VELIRRLVSSGLPVVEATSFVSPKWVPQLADARDVMEAVRDLE----- 193 (452)
Q Consensus 126 ~V~I~D~TLRDG~Q~~~~~~~~~~k-------~~i~~~L~~~Gv~~IEvG~~~s~~~~p~~~D~e~v~~~i~~~~----- 193 (452)
.+.+.-..++.| ..+.++. .+.++.|.+.|++.|-++-.....+. .+.....+.+.+++..
T Consensus 54 ~~~~~~ar~~~~------~v~~~~l~~~~~~l~~aa~~L~~~g~d~IviaCnta~~~~-G~~~~~~~~~~l~~~~~~~~~ 126 (273)
T 2xed_A 54 EFSFHSTRMRMH------TVSPEGLAAMNAQRERCVLEIADAAPEVILYACLVAVMVG-GPGEHHRVESAVAEQLATGGS 126 (273)
T ss_dssp CEEEEEEEECCC------BCSHHHHHHHHTTHHHHHHHHHTTCCSEEEECCHHHHHTT-CTTHHHHHHHHHHHHHHHTTC
T ss_pred CeEEEEeCCccC------CCCHHHHHHHHHHHHHHHHHHhhcCCCEEEECCChHHHhc-ccchhHHHHHHHHHHhhccCC
Confidence 366666666666 2233332 44678888999999999743211100 0000123345555432
Q ss_pred CCceeEEecchhhhhhhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHH
Q 012949 194 GARLPVLTPNLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAV 273 (452)
Q Consensus 194 ~~~l~~l~~~~~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~ 273 (452)
++ +++.... .-++.+...|.++|.|..+-... +. ...
T Consensus 127 ~i--Pv~~~~~--------------------------A~~~al~~~g~~rvgvltp~~~~-------------~~--~~~ 163 (273)
T 2xed_A 127 QA--LVRSSAG--------------------------ALVEGLRALDAQRVALVTPYMRP-------------LA--EKV 163 (273)
T ss_dssp CC--EEEEHHH--------------------------HHHHHHHHTTCCEEEEEECSCHH-------------HH--HHH
T ss_pred CC--CEecHHH--------------------------HHHHHHHHcCCCeEEEEcCChhh-------------hH--HHH
Confidence 33 3332211 13445556788999998754321 11 123
Q ss_pred HHHHHhCCCcEEEEEEeeecCCC---CCCCCHHHHHHHHHHHHHCCcCEEEEc-CC
Q 012949 274 AHAAKVLSIPVRGYVSCVVGCPV---EGAIPPSKVAYVAKELHDMGCFEISLG-DT 325 (452)
Q Consensus 274 v~~Ak~~G~~V~~~l~~~~g~p~---~~r~d~e~l~~~a~~l~~~Gad~I~L~-DT 325 (452)
.++.++.|++|....+ .+.++ .++.+++.+.++++.+.+.|+|.|.|. -|
T Consensus 164 ~~~l~~~Gi~v~~~~~--~~~~~~~~~g~~~~~~l~~~~~~l~~~gadaIvLg~CT 217 (273)
T 2xed_A 164 VAYLEAEGFTISDWRA--LEVADNTEVGCIPGEQVMAAARSLDLSEVDALVISCAV 217 (273)
T ss_dssp HHHHHHTTCEEEEEEE--CCCCBHHHHHTCCHHHHHHHHHHSCCTTCSEEEEESSS
T ss_pred HHHHHHCCCEEecccc--CCCccchhhcccCHHHHHHHHHHHhhCCCCEEEEcCCC
Confidence 3555678998753222 22221 125567888888888877799999998 54
No 496
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=74.03 E-value=87 Score=32.44 Aligned_cols=155 Identities=14% Similarity=0.047 Sum_probs=86.6
Q ss_pred hHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCC--CCCHHHHHHHH
Q 012949 232 GFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEG--AIPPSKVAYVA 309 (452)
Q Consensus 232 ~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~--r~d~e~l~~~a 309 (452)
-++.+.++|++.|-+..+.+=.....-++-+..+.++.+.+ .. .+.++.+ +.. +...-+ .++.+-+...+
T Consensus 35 Ia~~L~~~Gv~~IE~g~~atF~~~~r~~~~d~~e~l~~i~~---~~--~~~~l~~-l~R--~~N~~G~~~~~ddv~~~~v 106 (464)
T 2nx9_A 35 IAQQLDQIGYWSLECWGGATFDSCIRFLGEDPWQRLRLLKQ---AM--PNTPLQM-LLR--GQNLLGYRHYADDVVDTFV 106 (464)
T ss_dssp GHHHHHTSCCSEEEEEETTHHHHHHHTTCCCHHHHHHHHHH---HC--SSSCEEE-EEC--GGGTTSSSCCCHHHHHHHH
T ss_pred HHHHHHHcCCCEEEeCcCccccchhhccCCCHHHHHHHHHH---hC--CCCeEEE-Eec--cccccCcccccchhhHHHH
Confidence 45667788999999986543100000013333444443322 11 2444432 211 111111 12334456678
Q ss_pred HHHHHCCcCEEEEcCCcCCCcHHHHHHHHHHHHHhCCCccEEEEeCCC------cCcHHHHHHHHHHcCCCEEeec-ccC
Q 012949 310 KELHDMGCFEISLGDTIGVGTPGTVVPMLEAVMAVVPVEKLAVHLHDT------YGQSLPNILISLQMGISTVDCS-VAG 382 (452)
Q Consensus 310 ~~l~~~Gad~I~L~DT~G~~~P~~v~~li~~l~~~~p~~~l~vH~Hnd------~GlA~ANaLaAl~aGa~~VD~S-v~G 382 (452)
+.+.++|++.|.+.|...-. ..+.+.++.+++.- ..+.+..|-. ..-.+.-+.++.++||+.|-.. -.|
T Consensus 107 ~~a~~~Gvd~i~if~~~sd~--~ni~~~i~~ak~~G--~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~l~DT~G 182 (464)
T 2nx9_A 107 ERAVKNGMDVFRVFDAMNDV--RNMQQALQAVKKMG--AHAQGTLCYTTSPVHNLQTWVDVAQQLAELGVDSIALKDMAG 182 (464)
T ss_dssp HHHHHTTCCEEEECCTTCCT--HHHHHHHHHHHHTT--CEEEEEEECCCCTTCCHHHHHHHHHHHHHTTCSEEEEEETTS
T ss_pred HHHHhCCcCEEEEEEecCHH--HHHHHHHHHHHHCC--CEEEEEEEeeeCCCCCHHHHHHHHHHHHHCCCCEEEEcCCCC
Confidence 88999999999999876543 67888888887753 2455455443 3344666777889999977543 233
Q ss_pred CCCCCCCCCCCCcccHHHHHHHHHc
Q 012949 383 LGGCPYAKGASGNVATEDVVYMLSG 407 (452)
Q Consensus 383 lGecP~a~graGNaalE~vv~~L~~ 407 (452)
++- -..+.+++..|+.
T Consensus 183 ~~~---------P~~v~~lv~~l~~ 198 (464)
T 2nx9_A 183 ILT---------PYAAEELVSTLKK 198 (464)
T ss_dssp CCC---------HHHHHHHHHHHHH
T ss_pred CcC---------HHHHHHHHHHHHH
Confidence 332 2345566666653
No 497
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=73.96 E-value=26 Score=35.73 Aligned_cols=196 Identities=16% Similarity=0.124 Sum_probs=105.8
Q ss_pred cEEEeCCc-----cccCCCCC-CC-----CCHHHHHHHHHHHHHCCCCEEEEecCC-CCCcccccC-------CHHHHHH
Q 012949 127 VKIVEVGP-----RDGLQNEK-NT-----VPTGVKVELIRRLVSSGLPVVEATSFV-SPKWVPQLA-------DARDVME 187 (452)
Q Consensus 127 V~I~D~TL-----RDG~Q~~~-~~-----~~~~~k~~i~~~L~~~Gv~~IEvG~~~-s~~~~p~~~-------D~e~v~~ 187 (452)
|.|+|-.+ |-|....+ +. -..+...++-+.-.++|.+.|+.-.|. ++..+.... ..+++..
T Consensus 22 ilIlDGgmGT~L~~~G~~~~~~ws~~l~l~~Pe~V~~iH~~Yl~AGAdII~TNTf~A~~~~l~~~G~~~~~~~~~~eln~ 101 (406)
T 1lt8_A 22 IVIGDGGFVFALEKRGYVKAGPWTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTFYASEDKLENRGNYVLEKISGQEVNE 101 (406)
T ss_dssp CEECCCCHHHHHHHHTSSCTTTCCCTHHHHCHHHHHHHHHHHHHTTCSEEECSCTTCSSCC-------------CHHHHH
T ss_pred EEEEeCccchHHHHCCCCCCcccchHhhccCHHHHHHHHHHHHHhCccceeccccccCHHHHHhcCCccchhHHHHHHHH
Confidence 77887765 44443221 21 134666777788889999999998664 433222111 0122222
Q ss_pred -HH---HhccC--CceeE--EecchhhhhhhhhhhhhccchhhhhhhhccHHhHHHHHHcCCCEEEEEecCChHHHhhhc
Q 012949 188 -AV---RDLEG--ARLPV--LTPNLKVILQRSILFQQCHASVISSNLWVYLQGFEAAIAAGAKEVAIFASASEAFSKSNI 259 (452)
Q Consensus 188 -~i---~~~~~--~~l~~--l~~~~~~~i~r~~~~~~~~~~~i~~~~~~~~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~ 259 (452)
.+ ++..+ -.+.+ +-|.-..+ .-+.+ ++. +..+.+-++..++.|+|.+.+-+-.+
T Consensus 102 ~Av~LAreAa~~~~~~VAGsIGP~g~~l--~~~s~----eel----~~~~~eqi~~L~~~GvDlll~ETi~~-------- 163 (406)
T 1lt8_A 102 AAADIARQVADEGDALVAGGVSQTPSYL--SAKSE----TEV----KKVFLQQLEVFMKKNVDFLIAEYFEH-------- 163 (406)
T ss_dssp HHHHHHHHHHTTTTCEEEEEECCCHHHH--TTCHH----HHH----HHHHHHHHHHHHHHTCSEEEECCCSC--------
T ss_pred HHHHHHHHHHhcCCCEEEEEcCCccccc--CCCCH----HHH----HHHHHHHHHHHhhCCCCEEEEcccCC--------
Confidence 11 11111 12222 22432210 00111 111 11234566777899999998875432
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHHHHHHCCcCEEEEcCCcCCCcHHHHHHHHH
Q 012949 260 NCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAKELHDMGCFEISLGDTIGVGTPGTVVPMLE 339 (452)
Q Consensus 260 ~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~li~ 339 (452)
+..++.+++.+++.|++|.+.++ |. ..++.+-..+.+.+..+.++|++.|.+.=+ .-|+.+..+++
T Consensus 164 -------~~Eakaa~~a~~~~~lPv~iS~T--~~--~~G~l~G~~~~~~~~~l~~~~~~avGvNC~---~gP~~~~~~l~ 229 (406)
T 1lt8_A 164 -------VEEAVWAVETLIASGKPVAATMA--IG--PEGDLHGVPPGEAAVRLVKAGASIIGVNCH---FDPTISLKTVK 229 (406)
T ss_dssp -------HHHHHHHHHHHGGGTSCEEEEEC--CB--TTBCTTCCCHHHHHHHHHTTTCSEEEEESS---SCHHHHHHHHH
T ss_pred -------HHHHHHHHHHHHHhCCcEEEEEE--EC--CCCCcCCCcHHHHHHHhhcCCCCEEEecCC---CCHHHHHHHHH
Confidence 23344556788888988874444 42 233333345666777777788877666331 35999999999
Q ss_pred HHHHhC----CCccEEEEe
Q 012949 340 AVMAVV----PVEKLAVHL 354 (452)
Q Consensus 340 ~l~~~~----p~~~l~vH~ 354 (452)
.+++.. ...+|.++.
T Consensus 230 ~l~~~~~~~g~~~pl~vyP 248 (406)
T 1lt8_A 230 LMKEGLEAAQLKAHLMSQP 248 (406)
T ss_dssp HHHHHHHTTTCCCEEEEEC
T ss_pred HHHHhhhhcCCCccEEEec
Confidence 998753 134666655
No 498
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=73.87 E-value=9.6 Score=35.69 Aligned_cols=109 Identities=11% Similarity=-0.037 Sum_probs=60.7
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEee-ecCCCCCCCCHHHHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCV-VGCPVEGAIPPSKVAYVA 309 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~-~g~p~~~r~d~e~l~~~a 309 (452)
+.++.+.++|.+.|.+... +. .+.++.+.+++.|+++... .+. +-.|..-....+.+.+.+
T Consensus 35 ~~l~~~~~~G~~~vEl~~~---------~~--------~~~~~~~~l~~~gl~~~~~-~~~~~~~~~~~~~~~~~~~~~i 96 (301)
T 3cny_A 35 QLLSDIVVAGFQGTEVGGF---------FP--------GPEKLNYELKLRNLEIAGQ-WFSSYIIRDGIEKASEAFEKHC 96 (301)
T ss_dssp HHHHHHHHHTCCEECCCTT---------CC--------CHHHHHHHHHHTTCEECEE-EEEECHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEecCC---------CC--------CHHHHHHHHHHCCCeEEEE-eccCCCChhhHHHHHHHHHHHH
Confidence 3678888999999888621 11 1234556778889987543 110 000000001235667788
Q ss_pred HHHHHCCcCEEEEcCC---c-CCC-----------cHHHHHHHHHHHHHhC-----CCccEEEEeCCC
Q 012949 310 KELHDMGCFEISLGDT---I-GVG-----------TPGTVVPMLEAVMAVV-----PVEKLAVHLHDT 357 (452)
Q Consensus 310 ~~l~~~Gad~I~L~DT---~-G~~-----------~P~~v~~li~~l~~~~-----p~~~l~vH~Hnd 357 (452)
+.+.++|++.|.+.-+ . |.. .......+++.+++.. -++.|.+|.|..
T Consensus 97 ~~a~~lG~~~v~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~~~~ 164 (301)
T 3cny_A 97 QYLKAINAPVAVVSEQTYTIQRSDTANIFKDKPYFTDKEWDEVCKGLNHYGEIAAKYGLKVAYHHHMG 164 (301)
T ss_dssp HHHHHTTCCEEEEEECTTCCTTCSSCCTTTCCCCCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCTT
T ss_pred HHHHHcCCCEEEecCCCccccCcccCCcccccccCcHHHHHHHHHHHHHHHHHHHHcCCEEEEecCCC
Confidence 8888899998877521 1 321 3334444444443321 245788888864
No 499
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=73.75 E-value=9.1 Score=38.34 Aligned_cols=58 Identities=12% Similarity=0.098 Sum_probs=34.3
Q ss_pred HHhHHHHHHcCCCEEEEEecCChHHHhhhcCCC----HHHHHHHHHHHHHHHHhCCCcEEEEEE
Q 012949 230 LQGFEAAIAAGAKEVAIFASASEAFSKSNINCS----IEDSLVRYRAVAHAAKVLSIPVRGYVS 289 (452)
Q Consensus 230 ~~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s----~e~~l~~~~~~v~~Ak~~G~~V~~~l~ 289 (452)
.+.++.|.+.|++.|.+....... ......+ .+...+.+.++.++|++.|..|+..+.
T Consensus 119 ~~~i~~A~~LGa~~vvv~~G~~g~--~~~~~~~~~~~~~~~~e~L~~l~~~A~~~G~~v~l~lE 180 (394)
T 1xla_A 119 LHNIDLAAEMGAETFVMWGGREGS--EYDGSKDLAAALDRMREGVDTAAGYIKDKGYNLRIALE 180 (394)
T ss_dssp HHHHHHHHHTTCSEEEECCTTCEE--SSGGGCCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEC
T ss_pred HHHHHHHHHhCCCEEEECCCCCcc--ccccccCHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEe
Confidence 347788889999999886442100 0001123 345556666778889999944443344
No 500
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=73.74 E-value=50 Score=32.17 Aligned_cols=100 Identities=13% Similarity=0.106 Sum_probs=62.3
Q ss_pred HhHHHHHHcCCCEEEEEecCChHHHhhhcCCCHHHHHHHHHHHHHHHHhCCCcEEEEEEeeecCCCCCCCCHHHHHHHHH
Q 012949 231 QGFEAAIAAGAKEVAIFASASEAFSKSNINCSIEDSLVRYRAVAHAAKVLSIPVRGYVSCVVGCPVEGAIPPSKVAYVAK 310 (452)
Q Consensus 231 ~~ie~a~~~Gi~~V~i~~s~Sd~~~~~~~~~s~e~~l~~~~~~v~~Ak~~G~~V~~~l~~~~g~p~~~r~d~e~l~~~a~ 310 (452)
+.++..++.|++.|-+.-+..|.+ ..|.+|-.+-++.+++.++. .++|.+.+ +..+.+...++++
T Consensus 32 ~lv~~li~~Gv~Gl~v~GtTGE~~-----~Ls~~Er~~v~~~~~~~~~g-rvpViaGv---------g~~~t~~ai~la~ 96 (311)
T 3h5d_A 32 ALIEHLLAHHTDGILLAGTTAESP-----TLTHDEELELFAAVQKVVNG-RVPLIAGV---------GTNDTRDSIEFVK 96 (311)
T ss_dssp HHHHHHHHTTCCCEEESSTTTTGG-----GSCHHHHHHHHHHHHHHSCS-SSCEEEEC---------CCSSHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECccccChh-----hCCHHHHHHHHHHHHHHhCC-CCcEEEeC---------CCcCHHHHHHHHH
Confidence 366777889999988887777753 35666666555555544432 24443211 2235667778888
Q ss_pred HHHHCCc-CEEEEc-CCcCCCcHHHHHHHHHHHHHhC
Q 012949 311 ELHDMGC-FEISLG-DTIGVGTPGTVVPMLEAVMAVV 345 (452)
Q Consensus 311 ~l~~~Ga-d~I~L~-DT~G~~~P~~v~~li~~l~~~~ 345 (452)
.+.++|+ |.+.+. =..--.+++.+.+.++.+.+..
T Consensus 97 ~A~~~Ga~davlv~~P~y~~~s~~~l~~~f~~va~a~ 133 (311)
T 3h5d_A 97 EVAEFGGFAAGLAIVPYYNKPSQEGMYQHFKAIADAS 133 (311)
T ss_dssp HHHHSCCCSEEEEECCCSSCCCHHHHHHHHHHHHHSC
T ss_pred HHHhcCCCcEEEEcCCCCCCCCHHHHHHHHHHHHHhC
Confidence 8888886 755443 3333446677777777777665
Done!