Query         012950
Match_columns 452
No_of_seqs    167 out of 1861
Neff          10.2
Searched_HMMs 29240
Date          Mon Mar 25 19:22:44 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012950.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012950hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3n9y_A Cholesterol SIDE-chain  100.0 1.5E-68 5.1E-73  535.0  36.3  412    1-450    47-478 (487)
  2 3k9v_A 1,25-dihydroxyvitamin D 100.0 1.7E-68 5.7E-73  533.9  36.5  404    1-446    63-482 (482)
  3 3swz_A Steroid 17-alpha-hydrox 100.0 3.1E-68 1.1E-72  533.5  37.6  414    1-447    44-479 (494)
  4 3mdm_A Cholesterol 24-hydroxyl 100.0 4.1E-68 1.4E-72  527.3  37.6  403    1-448    25-443 (456)
  5 3ld6_A Lanosterol 14-alpha dem 100.0 6.2E-69 2.1E-73  533.8  27.0  405    1-449    46-456 (461)
  6 3nxu_A Cytochrome P450 3A4; al 100.0 1.6E-68 5.6E-73  534.3  29.3  413    1-450    48-478 (485)
  7 2fdv_A Cytochrome P450 2A6; CY 100.0 1.8E-67 6.2E-72  525.4  36.4  412    1-447    45-473 (476)
  8 3e6i_A CYPIIE1, P450-J, cytoch 100.0 2.9E-67 9.9E-72  524.1  37.2  418    1-451    45-476 (476)
  9 1r9o_A Cytochrome P450 2C9; mo 100.0 1.9E-67 6.6E-72  525.4  35.0  412    1-447    46-474 (477)
 10 2ve3_A Putative cytochrome P45 100.0 1.3E-67 4.6E-72  521.4  33.5  397    1-446    45-443 (444)
 11 3czh_A Cytochrome P450 2R1; vi 100.0 6.5E-67 2.2E-71  521.8  37.1  413    1-448    49-477 (481)
 12 3pm0_A Cypib1, cytochrome P450 100.0 2.1E-67 7.1E-72  529.3  33.6  422    1-448    43-485 (507)
 13 1po5_A Cytochrome P450 2B4; ox 100.0 1.3E-67 4.5E-72  526.3  31.6  413    1-448    45-474 (476)
 14 3qz1_A Steroid 21-hydroxylase; 100.0 1.5E-67 5.3E-72  528.8  28.1  406    1-448    58-485 (496)
 15 2ij2_A Cytochrome P450 BM3; mo 100.0 1.7E-66 5.8E-71  517.1  33.2  407    1-448    38-453 (470)
 16 3tbg_A Cytochrome P450 2D6; mo 100.0 5.3E-66 1.8E-70  515.3  35.5  415    1-448    45-477 (479)
 17 3dbg_A Putative cytochrome P45 100.0 6.7E-67 2.3E-71  520.0  28.5  403    1-447    56-462 (467)
 18 3s79_A Cytochrome P450 19A1; o 100.0 1.2E-65   4E-70  516.1  37.0  404    1-449    83-498 (503)
 19 3gw9_A Sterol 14alpha-demethyl 100.0 4.1E-66 1.4E-70  512.0  32.4  403    1-447    39-450 (450)
 20 2hi4_A Cytochrome P450 1A2; CY 100.0 2.1E-66 7.2E-71  520.1  30.4  422    1-447    50-488 (495)
 21 2cib_A Cytochrome P450 51; hem 100.0 2.4E-66 8.3E-71  514.1  29.1  405    1-449    39-451 (455)
 22 3i3k_A Lanosterol 14-alpha dem 100.0 5.8E-64   2E-68  498.2  27.2  398    1-442    46-450 (461)
 23 3dax_A Cytochrome P450 7A1; ch 100.0 3.8E-61 1.3E-65  481.8  24.9  404    1-447    48-486 (491)
 24 1cpt_A Cytochrome P450-TERP; o 100.0 5.3E-60 1.8E-64  464.5  29.1  372    1-446    39-428 (428)
 25 1n97_A CYP175A1; electron tran 100.0 1.2E-60 4.2E-65  463.3  22.5  354    1-447    33-387 (389)
 26 3ejb_B Biotin biosynthesis cyt 100.0 2.7E-59 9.2E-64  456.4  31.0  363    1-447    27-397 (404)
 27 3buj_A CALO2; heme, iron, meta 100.0 4.3E-59 1.5E-63  453.6  29.0  359    1-447    27-397 (397)
 28 1izo_A P450bsbeta, cytochrome  100.0 1.9E-58 6.5E-63  452.3  33.3  375    1-447    35-416 (417)
 29 3a4g_A Vitamin D hydroxylase;  100.0   1E-58 3.5E-63  452.4  30.2  359    1-448    34-403 (411)
 30 2cd8_A Cytochrome P450 monooxy 100.0   5E-59 1.7E-63  458.1  27.7  362    1-449    60-431 (436)
 31 2uuq_A CYP130, cytochrome P450 100.0 2.2E-59 7.4E-64  457.6  24.7  357    4-446    47-413 (414)
 32 3v8d_A Cholesterol 7-alpha-mon 100.0 2.2E-59 7.4E-64  468.9  24.9  404    1-447    48-486 (491)
 33 3nc3_A Cytochrome P450 CYPX; c 100.0 1.8E-59 6.3E-64  461.6  23.5  371    1-445    67-440 (441)
 34 2xkr_A CYP142, putative cytoch 100.0 1.6E-58 5.5E-63  449.8  29.7  361    1-447    32-395 (398)
 35 2z3t_A Cytochrome P450; monoxy 100.0 2.6E-59 8.9E-64  458.6  23.8  366    1-449    34-419 (425)
 36 3aba_A Cytochrome P450; oxidor 100.0 1.9E-58 6.5E-63  449.7  29.1  359    1-447    33-403 (403)
 37 1gwi_A CYP154C1, cytochrome P4 100.0   6E-59   2E-63  454.2  25.0  361    1-447    31-410 (411)
 38 1q5d_A P450 epoxidase; cytochr 100.0 1.6E-58 5.3E-63  452.6  27.5  363    1-447    40-417 (419)
 39 1odo_A Putative cytochrome P45 100.0 6.1E-58 2.1E-62  447.0  30.0  361    1-445    29-407 (408)
 40 1z8o_A 6-deoxyerythronolide B  100.0 6.5E-58 2.2E-62  446.2  30.1  355    1-443    28-402 (404)
 41 2zwu_A Camphor 5-monooxygenase 100.0 2.5E-58 8.5E-63  450.0  26.9  355    1-448    53-412 (415)
 42 3awm_A Fatty acid alpha-hydrox 100.0 7.4E-58 2.5E-62  447.8  30.2  374    1-447    34-414 (415)
 43 4fb2_A P450CIN; heme, monooxyg 100.0 2.8E-58 9.5E-63  448.1  26.2  356    1-448    36-395 (398)
 44 2wm5_A CYP124, putative cytoch 100.0 8.6E-58 2.9E-62  448.9  29.1  361    1-443    58-434 (435)
 45 1ued_A P450 OXYC, P450 monooxy 100.0 9.4E-58 3.2E-62  445.2  28.9  352    1-443    38-406 (406)
 46 2jjn_A Cytochrome P450 113A1;  100.0 5.1E-58 1.7E-62  448.0  26.9  361    6-448    44-408 (411)
 47 3b6h_A Prostacyclin synthase;  100.0   6E-58 2.1E-62  459.3  27.9  402    1-448    53-491 (498)
 48 2y5n_A MYCG, P-450-like protei 100.0   2E-57 6.8E-62  443.9  30.2  355    1-443    51-417 (417)
 49 2dkk_A Cytochrome P450; CYP158 100.0 2.6E-58 8.8E-63  449.3  23.2  357    1-447    41-411 (411)
 50 3tkt_A Cytochrome P450; aromat 100.0 1.4E-57 4.8E-62  449.6  28.0  369    1-445    59-449 (450)
 51 2z36_A MOXA, cytochrome P450 t 100.0 9.4E-58 3.2E-62  445.8  26.0  357    1-445    36-409 (413)
 52 3b98_A Prostaglandin I2 syntha 100.0 4.2E-58 1.4E-62  457.8  23.8  395    1-448    53-472 (475)
 53 3abb_A CYP105D6, cytochrome P4 100.0 6.4E-58 2.2E-62  446.9  24.5  358    1-447    38-408 (408)
 54 3oft_A Cytochrome P450, CYP101 100.0 1.9E-57 6.4E-62  442.2  27.5  354    1-444    38-395 (396)
 55 3lxh_A Cytochrome P450; heme,  100.0 1.9E-57 6.6E-62  445.3  27.7  362    1-448    54-419 (421)
 56 1s1f_A Putative cytochrome P45 100.0 2.2E-57 7.6E-62  442.6  27.7  353    1-443    38-404 (406)
 57 2zbx_A Cytochrome P450-SU1; be 100.0 4.9E-57 1.7E-61  441.0  29.8  356    1-445    39-408 (412)
 58 1lfk_A OXYB, P450 monooxygenas 100.0 1.6E-57 5.5E-62  442.6  26.0  332    1-421    27-375 (398)
 59 3mgx_A Putative P450 monooxyge 100.0 1.4E-57 4.9E-62  444.4  25.6  355    1-446    51-415 (415)
 60 3r9b_A Cytochrome P450 164A2;  100.0 2.4E-57 8.2E-62  444.6  27.1  364    1-447    43-418 (418)
 61 3tyw_A Putative cytochrome P45 100.0   5E-57 1.7E-61  441.8  27.8  334    1-422    43-389 (417)
 62 3ivy_A Cytochrome P450 CYP125; 100.0 1.4E-57 4.7E-62  447.6  22.4  358    1-447    51-429 (433)
 63 1jfb_A Nitric-oxide reductase  100.0 4.9E-56 1.7E-60  433.4  31.8  339    1-421    31-381 (404)
 64 3rwl_A Cytochrome P450 alkane  100.0 2.6E-56 8.8E-61  437.2  29.5  361    1-445    52-426 (426)
 65 2xbk_A PIMD protein; epoxidati 100.0 1.1E-56 3.7E-61  436.6  26.1  349    1-443    40-404 (404)
 66 3oo3_A OXY protein; cytochrome 100.0 1.3E-55 4.5E-60  427.4  29.2  349    1-443    26-384 (384)
 67 1n40_A P450 MT2, cytochrome P4 100.0 7.8E-56 2.7E-60  430.3  27.2  353    1-443    30-396 (396)
 68 3b4x_A 367AA long hypothetical 100.0 9.2E-56 3.1E-60  425.2  24.4  340    1-445    13-366 (367)
 69 2wiy_A XPLA-heme, cytochrome P 100.0 1.8E-55 6.2E-60  427.2  26.1  357    1-443    34-393 (394)
 70 1io7_A Cytochrome P450 CYP119; 100.0 1.7E-55 5.7E-60  423.9  24.9  342    1-447    13-368 (368)
 71 3p3o_A Cytochrome P450; monoox 100.0 1.4E-55 4.9E-60  431.0  22.8  358    1-445    46-415 (416)
 72 2rfb_A Cytochrome P450; heme,  100.0 1.3E-55 4.6E-60  420.4  19.3  315    1-422     6-324 (343)
 73 4dnj_A Putative cytochrome P45 100.0 4.6E-52 1.6E-56  405.3  25.9  353    6-445    51-411 (412)
 74 3dsk_A Cytochrome P450 74A, ch 100.0 4.6E-53 1.6E-57  423.5  18.7  362    2-421    69-471 (495)
 75 3dan_A Cytochrome P450 74A2; A 100.0   4E-52 1.4E-56  414.4  19.2  314   47-421   109-453 (473)
 76 4dxy_A Cytochrome P450, CYP101 100.0 1.9E-49 6.4E-54  386.3  24.0  349   11-444    62-414 (417)
 77 2yjn_B Erycii, DTDP-4-keto-6-d 100.0 1.9E-43 6.6E-48  337.0   5.4  279    1-422    72-361 (381)
 78 1m46_B IQ4, IQ4 motif from MYO  23.9      62  0.0021   16.0   2.1   12  276-287     8-19  (26)
 79 3ijw_A Aminoglycoside N3-acety  22.0      47  0.0016   29.0   2.5   23  338-361    64-86  (268)

No 1  
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=100.00  E-value=1.5e-68  Score=534.96  Aligned_cols=412  Identities=17%  Similarity=0.222  Sum_probs=326.8

Q ss_pred             CceeeeccCcceEEeCCHHHHHHHHhcCCCCCCCCCchhhH---Hhh--hcCceeccCCccHHHHHhhhccc-cchhhhh
Q 012950            1 MNFLTWYGSRAQLVITQPELIKEILSNSDGTYPKVQAPGFL---RKI--LGDGLVTAGGENWHRQRKLATLA-FYAESLR   74 (452)
Q Consensus         1 ~~~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~~~~~~~~---~~~--~g~~l~~~~~~~w~~~Rr~~~~~-f~~~~l~   74 (452)
                      |||++|+|+.+.|+++||+++++|+.+++ .|++++....+   ...  .+.|+++.+|+.|+++||++++. |+.++++
T Consensus        47 ~i~~~~~g~~~~vvv~dp~~~~~il~~~~-~f~~r~~~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~l~~~~fs~~~l~  125 (487)
T 3n9y_A           47 PIYREKLGNVESVYVIDPEDVALLFKSEG-PNPERFLIPPWVAYHQYYQRPIGVLLKKSAAWKKDRVALNQEVMAPEATK  125 (487)
T ss_dssp             SEEEEEETTEEEEEECCHHHHHHHHHTCC-SSCCCCCCHHHHHHHHHTTCCCCGGGCCHHHHHHHHHHHHHHHTSHHHHT
T ss_pred             ceeeccCCCCCEEEEcCHHHHHHHHHhCC-CCCCCCCCcHHHHHHHHccccCCCccCCcHHHHHHHHhcCcccCCchHHH
Confidence            68999999999999999999999998765 67654422211   111  35688899999999999999995 9999999


Q ss_pred             hhcchhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhc------CCceeehhhhHHHHHHHHHHHhhcCCCc
Q 012950           75 VTKSNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHS------EGKEIEVSQEFKLLTSEIISRTAFGSSY  148 (452)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~------~~~~~d~~~~~~~~~~~~i~~~~fG~~~  148 (452)
                                                .+.+.+.++++.+++.|...      ++.++|+..++..+++|+|+.++||.++
T Consensus       126 --------------------------~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~  179 (487)
T 3n9y_A          126 --------------------------NFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVIFGERQ  179 (487)
T ss_dssp             --------------------------THHHHHHHHHHHHHHHHHHHHHHHTSSSEEECCHHHHHHHHHHHHHHHHHSSCC
T ss_pred             --------------------------HhhhHHHHHHHHHHHHHHHHhcccccCCCCccHHHHHHHHHHHHHHHHHhcccc
Confidence                                      99999999999999988752      2458999999999999999999999988


Q ss_pred             cch----hhHHHHH-HhhHHHHhhhhhhhcccc-ccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCC-CCCCC
Q 012950          149 LEG----ESIFNKL-TNMSFLASRNAYKIKIPL-IGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGES-EGYGN  221 (452)
Q Consensus       149 ~~~----~~~~~~~-~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~  221 (452)
                      +..    ++....+ ......+........+|. +..+++....+...+..+.+.+++.+.++++.+....+.. .....
T Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  259 (487)
T 3n9y_A          180 GMLEEVVNPEAQRFIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKDHVAAWDVIFSKADIYTQNFYWELRQKGSVHHDYR  259 (487)
T ss_dssp             CTTSSSCCHHHHHHHHHHHHHHHHHGGGTTSCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCSSCC
T ss_pred             cccCCCCChHHHHHHHHHHHHHHHHHHHHhcCHHHHhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchH
Confidence            521    1111112 222222222112233342 2244443333344445555667777777666554332211 12457


Q ss_pred             cHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCC-CCCChhhcc
Q 012950          222 DYFGLLLKAYHDPDMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQ-KNPAPDGIG  300 (452)
Q Consensus       222 d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~-~~~~~~~~~  300 (452)
                      |+++.|++.       ..++++++++++..+++||+|||+++++|++++|++||++|+||++||++++++ +.++.++++
T Consensus       260 d~l~~ll~~-------~~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~  332 (487)
T 3n9y_A          260 GILYRLLGD-------SKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQ  332 (487)
T ss_dssp             CHHHHHHHS-------CSSCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTTTCHHHHTT
T ss_pred             HHHHHHHhc-------CCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcccccchhhhhh
Confidence            999999974       258999999999999999999999999999999999999999999999999984 566789999


Q ss_pred             ccHHHHHHHHHhhcCCCCCCCccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCC
Q 012950          301 KLKTMSMVINESLRLYPPAVNISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNT  380 (452)
Q Consensus       301 ~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~  380 (452)
                      +||||+|||+|+||++|+++.++|++.+|++++||.|||||.|+++.|++||||++| +||++|+||||++++.+   ..
T Consensus       333 ~lpyl~avi~E~lRl~p~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~-~dp~~F~PeR~l~~~~~---~~  408 (487)
T 3n9y_A          333 LVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFF-FDPENFDPTRWLSKDKN---IT  408 (487)
T ss_dssp             SCHHHHHHHHHHHHHSCSSSEEEEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTS-SSTTSCCGGGGTCSCTT---SS
T ss_pred             hCHHHHHHHHHHhhhCCcccccceeecCceeeCCEEECCCCEEEeCcHHhcCCcccC-CCcccCChhhcCCCCCC---CC
Confidence            999999999999999999998899999999999999999999999999999999999 99999999999975432   24


Q ss_pred             CCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhcEEEeCCCCcCCCceeeEeecCCCceEEEEEccccc
Q 012950          381 PAAFLPFSSGPRICVGLNFAATEAKIALSMILQRYRFNLSPSYVHSPVLVVTLRPQHGLQVIFQPLSVNQ  450 (452)
Q Consensus       381 ~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r~~~~  450 (452)
                      ...++|||.|+|.|+|++||++|++++++.|+++|+|++.++.........++.|+.++.|++++|+...
T Consensus       409 ~~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~r~~~~  478 (487)
T 3n9y_A          409 YFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEIQHLSDVGTTFNLILMPEKPISFTFWPFNQEA  478 (487)
T ss_dssp             TTTCCTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEECTTCCCCCEEESSSEEESSCCCEEEEEC----
T ss_pred             CCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhCEEEecCCcccccceeeeecCCCCceeEEEECCcch
Confidence            6689999999999999999999999999999999999998764444444567899999999999998543


No 2  
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=100.00  E-value=1.7e-68  Score=533.90  Aligned_cols=404  Identities=20%  Similarity=0.303  Sum_probs=329.9

Q ss_pred             CceeeeccCcceEEeCCHHHHHHHHhcCCCCCCCCCchh---hHHhh--hcCceeccCCccHHHHHhhhcccc-chhhhh
Q 012950            1 MNFLTWYGSRAQLVITQPELIKEILSNSDGTYPKVQAPG---FLRKI--LGDGLVTAGGENWHRQRKLATLAF-YAESLR   74 (452)
Q Consensus         1 ~~~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~~~~~~---~~~~~--~g~~l~~~~~~~w~~~Rr~~~~~f-~~~~l~   74 (452)
                      +||++|+|+.+.|+++||+++++|+.+++ .|.+++...   .....  .+.|+++.+|+.|+++||++.+.| +++.++
T Consensus        63 ~i~~~~~g~~~~vvv~dp~~~~~il~~~~-~~~~r~~~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~f~~~~~~~  141 (482)
T 3k9v_A           63 QIFRMKLGSFDSVHLGSPSLLEALYRTES-AHPQRLEIKPWKAYRDHRNEAYGLMILEGQEWQRVRSAFQKKLMKPVEIM  141 (482)
T ss_dssp             SEEEEEETTEEEEEECSHHHHHHHHHTCC-SSCCCCCCHHHHHHHHHHTCCCCTTTCCHHHHHHHHHHHHHHHTCHHHHG
T ss_pred             CEEEEccCCCCEEEEcCHHHHHHHHHhcC-CCCCCCCchHHHHHHHhcCCCCCceeCCCchHHHHHHHhhHHhcChHHHH
Confidence            68999999999999999999999998754 776654222   12222  357899999999999999999986 778888


Q ss_pred             hhcchhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhc---CCceeehhhhHHHHHHHHHHHhhcCCCccch
Q 012950           75 VTKSNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHS---EGKEIEVSQEFKLLTSEIISRTAFGSSYLEG  151 (452)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~---~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~  151 (452)
                                                .+.+.+.++++.+++.+.+.   +++++|+.+++..+++|+|+.++||.+++..
T Consensus       142 --------------------------~~~~~i~~~~~~l~~~l~~~~~~~g~~vd~~~~~~~~t~dvi~~~~fG~~~~~~  195 (482)
T 3k9v_A          142 --------------------------KLDKKINEVLADFLERMDELCDERGRIPDLYSELNKWSFESICLVLYEKRFGLL  195 (482)
T ss_dssp             --------------------------GGHHHHHHHHHHHHHHHHHHCCTTSCCTTHHHHHHHHHHHHHHHHHHSCCCCSS
T ss_pred             --------------------------HHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHcccccCCC
Confidence                                      99999999999999999764   3567999999999999999999999988421


Q ss_pred             h-----hHHHHHHhhHHHHhhhhhhhccc-cccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHH
Q 012950          152 E-----SIFNKLTNMSFLASRNAYKIKIP-LIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFG  225 (452)
Q Consensus       152 ~-----~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~  225 (452)
                      +     +....................+| ++..+++....+...+..+.+.+++.+.++++.+....+    ...|++.
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~----~~~d~l~  271 (482)
T 3k9v_A          196 QKETEEEALTFITAIKTMMSTFGKMMVTPVELHKRLNTKVWQAHTLAWDTIFKSVKPCIDNRLQRYSQQ----PGADFLC  271 (482)
T ss_dssp             STTSTTSSHHHHHHHHHHHTTGGGGSSSCHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC----TTSCHHH
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHHhhhHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC----CchHHHH
Confidence            1     11111111222221111222233 122444444444555666777788888888887654322    4478888


Q ss_pred             HHHHhcCCCCCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCC-CCCChhhccccHH
Q 012950          226 LLLKAYHDPDMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQ-KNPAPDGIGKLKT  304 (452)
Q Consensus       226 ~ll~~~~~~~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~-~~~~~~~~~~lp~  304 (452)
                      .++..       ..++++++.+++..+++||+|||+++++|++++|++||++|+|+++||++++++ +.++.+++++|||
T Consensus       272 ~ll~~-------~~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~l~~lpy  344 (482)
T 3k9v_A          272 DIYQQ-------DHLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPRAEDLRNMPY  344 (482)
T ss_dssp             HHHHH-------TCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCTTCCCCGGGGGGCHH
T ss_pred             HHHhc-------cCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHHhhCHH
Confidence            88875       248999999999999999999999999999999999999999999999999985 6789999999999


Q ss_pred             HHHHHHHhhcCCCCCCCccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcc
Q 012950          305 MSMVINESLRLYPPAVNISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAF  384 (452)
Q Consensus       305 l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~  384 (452)
                      |+|||+|+||++|++|..+|++.+|++++||.|||||.|+++.|++||||++| +||++|+||||++++.+   ..+..+
T Consensus       345 l~avi~E~lRl~p~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~-~~p~~F~PeRfl~~~~~---~~~~~~  420 (482)
T 3k9v_A          345 LKACLKESMRLTPSVPFTTRTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNF-EDSHKFRPERWLQKEKK---INPFAH  420 (482)
T ss_dssp             HHHHHHHHHHHSCSCCEEEEECSSCEEETTEEECTTCEEEEECSGGGGCTTTC-SSTTSCCGGGGTCTTSC---CCGGGC
T ss_pred             HHHHHHHHhhcCCCCcCcccccCCceeeCCEEECCCCEEEEccccccCCCccC-CCcCccCccccCCCCCC---CCCccc
Confidence            99999999999999998899999999999999999999999999999999999 99999999999976432   356789


Q ss_pred             cccCCCCCCCcchHHHHHHHHHHHHHHHhhcEEEeCCCCcCCCceeeEeecCCCceEEEEEc
Q 012950          385 LPFSSGPRICVGLNFAATEAKIALSMILQRYRFNLSPSYVHSPVLVVTLRPQHGLQVIFQPL  446 (452)
Q Consensus       385 ~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r  446 (452)
                      +|||.|+|.|+|++||++|++++++.|+++|+|++.++.+.......++.|..+++|.+++|
T Consensus       421 ~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~R  482 (482)
T 3k9v_A          421 LPFGIGKRMCIGRRLAELQLHLALCWIIQKYDIVATDNEPVEMLHLGILVPSRELPIAFRPR  482 (482)
T ss_dssp             CTTCCSTTSCSCHHHHHHHHHHHHHHHHHHEEEEESCCCCCCEEESSSEEESSSCCEEEEEC
T ss_pred             cCCCCCCcCCccHHHHHHHHHHHHHHHHHhcEEeccCCCCcccccceeecCCCCcceEEeeC
Confidence            99999999999999999999999999999999999776444444456789999999999987


No 3  
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=100.00  E-value=3.1e-68  Score=533.53  Aligned_cols=414  Identities=21%  Similarity=0.346  Sum_probs=333.7

Q ss_pred             CceeeeccCcceEEeCCHHHHHHHHhcCCCCCCCCCchhhHHhhh--cCceeccC-CccHHHHHhhhccccch--hhhhh
Q 012950            1 MNFLTWYGSRAQLVITQPELIKEILSNSDGTYPKVQAPGFLRKIL--GDGLVTAG-GENWHRQRKLATLAFYA--ESLRV   75 (452)
Q Consensus         1 ~~~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~~~~~~~~~~~~--g~~l~~~~-~~~w~~~Rr~~~~~f~~--~~l~~   75 (452)
                      +||++|+|+.++|||+||+++++++.+++..|+.++.........  +.|+++.+ |+.|+.+||++.++|+.  ..+. 
T Consensus        44 ~i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~~~~~~~~~~~gl~~~~~g~~wr~~Rr~~~~~f~~~~~~~~-  122 (494)
T 3swz_A           44 PIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMATLDIASNNRKGIAFADSGAHWQLHRRLAMATFALFKDGDQ-  122 (494)
T ss_dssp             SEEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCHHHHHHTTTTCSSSSSCSSHHHHHHHHHHHHHTTTTSSSTT-
T ss_pred             CEEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcHHHHHhccCCCCeEeCCCCHHHHHHHHHHHHHHHHhcchHH-
Confidence            689999999999999999999999998877886554323333222  45777665 99999999999999974  3455 


Q ss_pred             hcchhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhHHHHHHHHHHHhhcCCCccchhhHH
Q 012950           76 TKSNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEFKLLTSEIISRTAFGSSYLEGESIF  155 (452)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~~~~~  155 (452)
                                               .+.+.+.+++..+++.+...+++++|+...+..+++|+|+.++||.+++..++..
T Consensus       123 -------------------------~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~  177 (494)
T 3swz_A          123 -------------------------KLEKIICQEISTLCDMLATHNGQSIDISFPVFVAVTNVISLICFNTSYKNGDPEL  177 (494)
T ss_dssp             -------------------------CHHHHHHHHHHHHHHHHHHTTTEEECCHHHHHHHHHHHHHHHHHSCCCCTTCTHH
T ss_pred             -------------------------HHHHHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHHHHHHcCCcCCCCCHHH
Confidence                                     8899999999999999876567899999999999999999999999987555444


Q ss_pred             HHHHhhHHHHh----hhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHhc
Q 012950          156 NKLTNMSFLAS----RNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKAY  231 (452)
Q Consensus       156 ~~~~~~~~~~~----~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~  231 (452)
                      ..+......+.    .......+|++ .++|....+...+..+.+..++.+.++++++....    +...|+++.|++..
T Consensus       178 ~~~~~~~~~~~~~~~~~~~~~~~P~l-~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~~d~l~~ll~~~  252 (494)
T 3swz_A          178 NVIQNYNEGIIDNLSKDSLVDLVPWL-KIFPNKTLEKLKSHVKIRNDLLNKILENYKEKFRS----DSITNMLDTLMQAK  252 (494)
T ss_dssp             HHHHHHHHHHHHHHCSSSSCCSSCGG-GTSCCSHHHHHHHHHHHHHHHHHHHHHHHTTTCCT----TCCCSHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcccchHHHHHHHH-HHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc----cchhHHHHHHHHHH
Confidence            44433322221    11233456776 66665555556666667777777777666543221    24579999999864


Q ss_pred             CCC--------CCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCC-CCCChhhcccc
Q 012950          232 HDP--------DMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQ-KNPAPDGIGKL  302 (452)
Q Consensus       232 ~~~--------~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~-~~~~~~~~~~l  302 (452)
                      .+.        .....++++++++++..+++||+|||+++++|++++|++||++|+|+++||+++++. +.++.+++++|
T Consensus       253 ~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~~~l  332 (494)
T 3swz_A          253 MNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRL  332 (494)
T ss_dssp             HTSCCC----CCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSCCCGGGGGTC
T ss_pred             HhhhcccccccccccccCHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCCCCCCCHHHHhcC
Confidence            221        012358999999999999999999999999999999999999999999999999985 67899999999


Q ss_pred             HHHHHHHHHhhcCCCCCCC-ccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCC
Q 012950          303 KTMSMVINESLRLYPPAVN-ISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTP  381 (452)
Q Consensus       303 p~l~a~i~E~lRl~p~~~~-~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~  381 (452)
                      |||+|||+|+||++|++|. ++|.+.+|++++||.|||||.|+++.|++||||++| +||++|+||||+++++.......
T Consensus       333 pyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~-~dp~~F~PeRfl~~~~~~~~~~~  411 (494)
T 3swz_A          333 LLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEW-HQPDQFMPERFLNPAGTQLISPS  411 (494)
T ss_dssp             HHHHHHHHHHHHHSCSSTTCSCEECSSSEEETTEEECTTCEEEECHHHHHHCTTTS-SSTTSCCGGGGBCTTSSSBCCCC
T ss_pred             HHHHHHHHHHHHhcCCcccccceecCCCceECCEEeCCCCEEEEehHHhhCCcccC-CCcccCCcccccCCCCccccCCC
Confidence            9999999999999999997 599999999999999999999999999999999999 99999999999986543222245


Q ss_pred             CcccccCCCCCCCcchHHHHHHHHHHHHHHHhhcEEEeCCCCcC---CCceeeEeecCCCceEEEEEcc
Q 012950          382 AAFLPFSSGPRICVGLNFAATEAKIALSMILQRYRFNLSPSYVH---SPVLVVTLRPQHGLQVIFQPLS  447 (452)
Q Consensus       382 ~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~---~~~~~~~~~p~~~~~v~~~~r~  447 (452)
                      ..++|||.|+|.|+|++||.+|++++++.|+++|+|+++++...   ....+.+..| .+++|++++|+
T Consensus       412 ~~~~~Fg~G~r~C~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~p-~~~~v~~~~R~  479 (494)
T 3swz_A          412 VSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLPSLEGIPKVVFLI-DSFKVKIKVRQ  479 (494)
T ss_dssp             SCCCTTCCGGGSCSCHHHHHHHHHHHHHHHHHHEEEECCSSCCCCCCSCEESSSEEC-CCCCEEEEECH
T ss_pred             CcccCCCCCCCCCCcHHHHHHHHHHHHHHHHHhcEEeeCCCCCCCCCCCccceeecC-CCcEEEEEEcC
Confidence            68999999999999999999999999999999999998754221   1122344455 58999999996


No 4  
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=100.00  E-value=4.1e-68  Score=527.32  Aligned_cols=403  Identities=26%  Similarity=0.399  Sum_probs=330.7

Q ss_pred             CceeeeccCcceEEeCCHHHHHHHHhcCCCCCCCCC-chhhHHh-----hhcCceecc-CCccHHHHHhhhccccchhhh
Q 012950            1 MNFLTWYGSRAQLVITQPELIKEILSNSDGTYPKVQ-APGFLRK-----ILGDGLVTA-GGENWHRQRKLATLAFYAESL   73 (452)
Q Consensus         1 ~~~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~~~-~~~~~~~-----~~g~~l~~~-~~~~w~~~Rr~~~~~f~~~~l   73 (452)
                      |||++++|+.+.|+++||+++++|+.++  .|.+.. .+.....     .+|.|+++. +|+.|+++||+++++|+++++
T Consensus        25 ~v~~~~~~~~~~vvv~~p~~~~~il~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~Rr~~~~~fs~~~l  102 (456)
T 3mdm_A           25 PVVRVNVFHKTSVIVTSPESVKKFLMST--KYNKDSKMYRALQTVFGERLFGQGLVSECNYERWHKQRRVIDLAFSRSSL  102 (456)
T ss_dssp             SEEEEEETTEEEEEECCHHHHHHHHTCT--TSCCCHHHHHHHHEETTEESSTTSTTTCCCHHHHHHHHHHHGGGGSHHHH
T ss_pred             CeEEEEeCCCCEEEECCHHHHHHHHhhc--cccccchhHHHHHHhhcccccCCCcccCCChHHHHHHHhhcccccCHHHH
Confidence            6899999999999999999999999753  465544 2222221     245677664 899999999999999999999


Q ss_pred             hhhcchhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhc--CCceeehhhhHHHHHHHHHHHhhcCCCccch
Q 012950           74 RVTKSNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHS--EGKEIEVSQEFKLLTSEIISRTAFGSSYLEG  151 (452)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~--~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~  151 (452)
                      +                          .+.+.+.++++.+++.+...  +++++|+..++..+++|+|+.++||.+++..
T Consensus       103 ~--------------------------~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~  156 (456)
T 3mdm_A          103 V--------------------------SLMETFNEKAEQLVEILEAKADGQTPVSMQDMLTYTAMDILAKAAFGMETSML  156 (456)
T ss_dssp             H--------------------------TTHHHHHHHHHHHHHHHHHTCSSSSCEEHHHHHHHHHHHHHHHHHHSCCCCGG
T ss_pred             H--------------------------HHHHHHHHHHHHHHHHHHHhcCCCCeeeHHHHHHHHHHHHHHHHHcCCChhhh
Confidence            9                          99999999999999999764  3568999999999999999999999988632


Q ss_pred             ----hhHHHHHHhhHHHHhhhhhhhccccccccccCCc--hhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHH
Q 012950          152 ----ESIFNKLTNMSFLASRNAYKIKIPLIGDFVKTSD--DVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFG  225 (452)
Q Consensus       152 ----~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~  225 (452)
                          .++...+......+..    ...|++ .++|...  .+...+..+.+..++.+.++++++....+..  ...|+++
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~--~~~d~l~  229 (456)
T 3mdm_A          157 LGAQKPLSQAVKLMLEGITA----SRNTLA-KFLPGKRKQLREVRESIRFLRQVGRDWVQRRREALKRGEE--VPADILT  229 (456)
T ss_dssp             GTCCHHHHHHHHHHHHHHHH----HHHSCG-GGCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC--CCCCHHH
T ss_pred             cccccHHHHHHHHHHHHHHH----HHHHHH-HhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc--chhhHHH
Confidence                2222222222222111    112333 4444321  2234455666777888888888776554432  4579999


Q ss_pred             HHHHhcCCCCCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCC-CCCChhhccccHH
Q 012950          226 LLLKAYHDPDMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQ-KNPAPDGIGKLKT  304 (452)
Q Consensus       226 ~ll~~~~~~~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~-~~~~~~~~~~lp~  304 (452)
                      .|++...     ..++++++++++..+++||+|||+++++|++++|++||++|++|++||++++++ +.++.+++++|||
T Consensus       230 ~ll~~~~-----~~~~~~~l~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpy  304 (456)
T 3mdm_A          230 QILKAEE-----GAQDDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQY  304 (456)
T ss_dssp             HHHHHTS-----SCSSSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCSSCCHHHHHHCHH
T ss_pred             HHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHcCCCCCCCHHHHhcCHH
Confidence            9998742     247899999999999999999999999999999999999999999999999985 6799999999999


Q ss_pred             HHHHHHHhhcCCCCCCCccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcc
Q 012950          305 MSMVINESLRLYPPAVNISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAF  384 (452)
Q Consensus       305 l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~  384 (452)
                      |+|||+|+||++|++++.+|.+.+|++++||.|||||.|+++.|++||||++| +||++|+||||+++..    .....+
T Consensus       305 l~a~i~E~lRl~p~~~~~~r~~~~d~~i~g~~Ip~Gt~v~~~~~~~~~d~~~~-~dp~~F~PeRfl~~~~----~~~~~~  379 (456)
T 3mdm_A          305 LSQVLKESLRLYPPAWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYF-EDPLTFNPDRFGPGAP----KPRFTY  379 (456)
T ss_dssp             HHHHHHHHHHHCCSSCCEEEEECSCEEETTEEECSSEEEEECHHHHHTCTTTS-SSTTSCCGGGGSTTSC----CCSSSC
T ss_pred             HHHHHHHHHHhCCCccccccccCCceeECCEEECCCCEEEeehHHhcCCchhc-CCccccCccccCCCCC----CCCCcc
Confidence            99999999999999998899999999999999999999999999999999999 9999999999997632    345689


Q ss_pred             cccCCCCCCCcchHHHHHHHHHHHHHHHhhcEEEeCCCCcCCCceeeEeecCCCceEEEEEccc
Q 012950          385 LPFSSGPRICVGLNFAATEAKIALSMILQRYRFNLSPSYVHSPVLVVTLRPQHGLQVIFQPLSV  448 (452)
Q Consensus       385 ~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r~~  448 (452)
                      +|||.|+|.|+|++||++|++++++.|+++|+|++.++.........++.|..+++|.+++|+.
T Consensus       380 ~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~r~~  443 (456)
T 3mdm_A          380 FPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLVPGQRFGLQEQATLKPLDPVLCTLRPRGW  443 (456)
T ss_dssp             CTTCCGGGSCTTHHHHHHHHHHHHHHHHHHEEEEECTTCCCCEEESSSEEESSCCEEEEEECCC
T ss_pred             cCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCeEEeCCCCcceeecceEEecCCCeEEEEEEcCC
Confidence            9999999999999999999999999999999999987754433445678999999999999974


No 5  
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=100.00  E-value=6.2e-69  Score=533.78  Aligned_cols=405  Identities=16%  Similarity=0.255  Sum_probs=331.8

Q ss_pred             CceeeeccCcceEEeCCHHHHHHHHhcCCCCCCCCC-chhhHHhhhcCceec-cCCccHHHHHhhhccccchhhhhhhcc
Q 012950            1 MNFLTWYGSRAQLVITQPELIKEILSNSDGTYPKVQ-APGFLRKILGDGLVT-AGGENWHRQRKLATLAFYAESLRVTKS   78 (452)
Q Consensus         1 ~~~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~~~-~~~~~~~~~g~~l~~-~~~~~w~~~Rr~~~~~f~~~~l~~~~~   78 (452)
                      |||++++|+.++|+|+||+++++|+.+++..|+++. ........+|.|+++ .+++.|+++|+++.++|+...++    
T Consensus        46 ~i~~~~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~R~~~~~~f~~~~l~----  121 (461)
T 3ld6_A           46 PVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTTPVFGKGVAYDVPNPVFLEQKKMLKSGLNIAHFK----  121 (461)
T ss_dssp             SEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHHHHHHHCTTSGGGSCHHHHHHHHHHHHHHSSHHHHH----
T ss_pred             CEEEEEECCccEEEEeCHHHHHHHHhCCccccCCCcchhhhhhccCCCccccCCCcHHHHHHHHhccccccHHHHh----
Confidence            689999999999999999999999988776776655 334455567877654 67999999999999999999999    


Q ss_pred             hhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhHHHHHHHHHHHhhcCCCccchhhHHHHH
Q 012950           79 NCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEFKLLTSEIISRTAFGSSYLEGESIFNKL  158 (452)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~  158 (452)
                                            .+.+.+.+.+.++++.|.+  .+.+|+.+.+..+++++++.++||.++.....  ..+
T Consensus       122 ----------------------~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~fG~~~~~~~~--~~~  175 (461)
T 3ld6_A          122 ----------------------QHVSIIEKETKEYFESWGE--SGEKNVFEALSELIILTASHCLHGKEIRSQLN--EKV  175 (461)
T ss_dssp             ----------------------HHHHHHHHHHHHHGGGGCS--EEEEEHHHHHHHHHHHHHHHHHTCHHHHHTCC--HHH
T ss_pred             ----------------------hhhHHHHHHHHHHHHHHhh--cCCccHHHHHHHHHHHHHHHHHcCcchhhhhh--hhh
Confidence                                  9999999999999999875  57899999999999999999999987753211  111


Q ss_pred             HhhHHHHhhhh--hhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHhcCCCCC
Q 012950          159 TNMSFLASRNA--YKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKAYHDPDM  236 (452)
Q Consensus       159 ~~~~~~~~~~~--~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~  236 (452)
                      ......+....  ....+|   .|++.....+..++.+.+.+++.+.+++++..    .  ...+|+++.|+++..++  
T Consensus       176 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~----~--~~~~d~l~~ll~~~~~~--  244 (461)
T 3ld6_A          176 AQLYADLDGGFSHAAWLLP---GWLPLPSFRRRDRAHREIKDIFYKAIQKRRQS----Q--EKIDDILQTLLDATYKD--  244 (461)
T ss_dssp             HHHHHHHHTTSSHHHHHSC---TTSCCHHHHHHHHHHHHHHHHHHHHHHHHTTC----C--CCCCSHHHHHHTCBCTT--
T ss_pred             hhhhhhhhhhhhhHHHhhh---hhccCcHHHHHHHHHHHHHHHHHHHHHHHHhc----C--CCCcchhhhhHHhhhcc--
Confidence            11111111111  112233   34555555666777788888888887766532    1  15689999999876554  


Q ss_pred             CCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCC--CCCChhhccccHHHHHHHHHhhc
Q 012950          237 TKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQ--KNPAPDGIGKLKTMSMVINESLR  314 (452)
Q Consensus       237 ~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~--~~~~~~~~~~lp~l~a~i~E~lR  314 (452)
                      +..++++++++++..+++||+|||+++++|++++|++||++|++|++|+++++++  ...+.+++++||||+|||+|+||
T Consensus       245 ~~~ls~~ei~~~~~~~~~aG~dTt~~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~l~~lpyl~avi~E~lR  324 (461)
T 3ld6_A          245 GRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCIKETLR  324 (461)
T ss_dssp             SCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCTTCCCCCHHHHHTCHHHHHHHHHHHH
T ss_pred             cCCCCHHHHHHHHHhhhhcccccccccchhhhcccccChHHHHHHHHHHHHHhcccccchhHHHHHHHhhhhheeeeccc
Confidence            4579999999999999999999999999999999999999999999999999985  45788999999999999999999


Q ss_pred             CCCCCCCccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcccccCCCCCCC
Q 012950          315 LYPPAVNISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPFSSGPRIC  394 (452)
Q Consensus       315 l~p~~~~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C  394 (452)
                      ++|+++...|.+.+|++++||.|||||.|+++.+++||||++| +||++|+||||+++++..  ..+..|+|||+|+|.|
T Consensus       325 l~p~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~-~dP~~F~PeRfl~~~~~~--~~~~~~~pFG~G~r~C  401 (461)
T 3ld6_A          325 LRPPIMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSW-VERLDFNPDRYLQDNPAS--GEKFAYVPFGAGRHRC  401 (461)
T ss_dssp             HSCSCCCEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTC-TTTTSCCGGGGGSCCHHH--HSSSSSCTTCCGGGCC
T ss_pred             cCCchhccccccccceeeCCcccCCCCeeeechHhhcCCcccc-CCccccCccccCCCCccc--CCCCccccCCCcCcCC
Confidence            9999998899999999999999999999999999999999999 899999999999875432  2566899999999999


Q ss_pred             cchHHHHHHHHHHHHHHHhhcEEEeCCCCcCCCceeeEeecCCCceEEEEEcccc
Q 012950          395 VGLNFAATEAKIALSMILQRYRFNLSPSYVHSPVLVVTLRPQHGLQVIFQPLSVN  449 (452)
Q Consensus       395 ~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r~~~  449 (452)
                      +|++||++|++++++.|+++|+|+++++..........+.+.+++.|++++|+.-
T Consensus       402 ~G~~lA~~e~~~~la~ll~~f~~~l~~~~~~~~~~~~~~~~p~~~~v~~~~Rss~  456 (461)
T 3ld6_A          402 IGENFAYVQIKTIWSTMLRLYEFDLIDGYFPTVNYTTMIHTPENPVIRYKRRSTH  456 (461)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHEEEECSTTCCCCBCCSSSSCCBSSCEEEEEECC--
T ss_pred             hhHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcccccceEEcCCceEEEEEECCCC
Confidence            9999999999999999999999999876433322222334445889999999853


No 6  
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=100.00  E-value=1.6e-68  Score=534.35  Aligned_cols=413  Identities=24%  Similarity=0.438  Sum_probs=319.3

Q ss_pred             CceeeeccCcceEEeCCHHHHHHHHhcC-CCCCCCCCchhhHHhhhcCceeccCCccHHHHHhhhccccchhhhhhhcch
Q 012950            1 MNFLTWYGSRAQLVITQPELIKEILSNS-DGTYPKVQAPGFLRKILGDGLVTAGGENWHRQRKLATLAFYAESLRVTKSN   79 (452)
Q Consensus         1 ~~~~~~~g~~~~vvv~~p~~~~~il~~~-~~~f~~~~~~~~~~~~~g~~l~~~~~~~w~~~Rr~~~~~f~~~~l~~~~~~   79 (452)
                      +||++++|+.++|+|+||+++++||.++ .+.|..+...... ...+.++++.+|+.|+++||+++++|++++++     
T Consensus        48 ~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~f~~r~~~~~~-~~~~~~l~~~~g~~w~~~R~~~~~~fs~~~l~-----  121 (485)
T 3nxu_A           48 KVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPV-GFMKSAISIAEDEEWKRLRSLLSPTFTSGKLK-----  121 (485)
T ss_dssp             SEEEEEETTEEEEEECCHHHHHHHHTTTTTTTCCCCCCCSCC-GGGGGSTTTCCHHHHHHHHHHHGGGGCHHHHH-----
T ss_pred             CeEEEEeCCCCEEEECCHHHHHHHHhccchhhccCCcccccc-cccccCccccCCcHHHHHHhhcChhcCHHHHH-----
Confidence            6899999999999999999999999876 4567544322222 24567888999999999999999999999999     


Q ss_pred             hhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhc--CCceeehhhhHHHHHHHHHHHhhcCCCccch----hh
Q 012950           80 CLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHS--EGKEIEVSQEFKLLTSEIISRTAFGSSYLEG----ES  153 (452)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~--~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~----~~  153 (452)
                                           .+.+.+.++++.+++.+...  +++++|+.+++..+++|+|+.++||.+++..    ++
T Consensus       122 ---------------------~~~~~i~~~~~~l~~~l~~~~~~g~~~d~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~  180 (485)
T 3nxu_A          122 ---------------------EMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDP  180 (485)
T ss_dssp             ---------------------HHHHHHHHHHHHHHHHHHHHHHHTCCEEHHHHHHHHHHHHHHHHHHSCCCCGGGCTTCH
T ss_pred             ---------------------HHHHHHHHHHHHHHHHHHHHhccCCcCcHHHHHHHHHHHHHHHHHcCCccccccCCCcH
Confidence                                 99999999999999998653  4678999999999999999999999988642    22


Q ss_pred             HHHHHHhhHHHH---hhhhhhhcccccc---ccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHH
Q 012950          154 IFNKLTNMSFLA---SRNAYKIKIPLIG---DFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLL  227 (452)
Q Consensus       154 ~~~~~~~~~~~~---~~~~~~~~~p~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~l  227 (452)
                      +...+.......   ........+|++.   .+++...  ......+.+...+.+.++++..   ...  ....|+++.|
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~d~l~~l  253 (485)
T 3nxu_A          181 FVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICV--FPREVTNFLRKSVKRMKESRLE---DTQ--KHRVDFLQLM  253 (485)
T ss_dssp             HHHHHTTSCCCCTTSHHHHHHHHCTTHHHHHHHTTCCS--SCHHHHHHHHHHHHHHHHHHHH---CC-----CCCHHHHH
T ss_pred             HHHHHHHHhchhhHHHHHHHHHHhhhhHHHHHHhhhhh--chHHHHHHHHHHHHHHHHHHHh---ccC--CCcccHHHHH
Confidence            222222111000   0000112233221   1111111  1122333344444444444322   111  1567999999


Q ss_pred             HHhcCCC--CCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCC-CCCChhhccccHH
Q 012950          228 LKAYHDP--DMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQ-KNPAPDGIGKLKT  304 (452)
Q Consensus       228 l~~~~~~--~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~-~~~~~~~~~~lp~  304 (452)
                      ++.....  ..+..+++++++++++.+++||+|||+++++|++++|++||++|++|++||++++++ +.++++++.+|||
T Consensus       254 l~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~lpy  333 (485)
T 3nxu_A          254 IDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEY  333 (485)
T ss_dssp             HHHHC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTTCCCCHHHHHHCHH
T ss_pred             HHhhhccccccccCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhccCCCCCHHHHhcChH
Confidence            9875432  123469999999999999999999999999999999999999999999999999985 6799999999999


Q ss_pred             HHHHHHHhhcCCCCCCCccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcc
Q 012950          305 MSMVINESLRLYPPAVNISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAF  384 (452)
Q Consensus       305 l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~  384 (452)
                      |+|||+|+||++|+++.++|++.+|++++||.|||||.|+++.+++||||++| +||++|+||||+++....  ..+..+
T Consensus       334 l~a~i~E~lRl~p~~~~~~R~~~~d~~i~g~~Ip~Gt~V~~~~~~~~~d~~~~-~dp~~F~PeR~l~~~~~~--~~~~~~  410 (485)
T 3nxu_A          334 LDMVVNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYW-TEPEKFLPERFSKKNKDN--IDPYIY  410 (485)
T ss_dssp             HHHHHHHHHHHSCSCSCEEEECCSCEEETTEEECTTCEEEECHHHHHTCTTTC-SSTTSCCGGGGSHHHHTT--SCTTTC
T ss_pred             HHHHHHHHHhcCCCccCcceeeCCCeeECCEEECCCCEEEEchHHhcCChhhc-CCccCcCccccCCCcccc--CCCCCc
Confidence            99999999999999998899999999999999999999999999999999999 999999999999764332  356789


Q ss_pred             cccCCCCCCCcchHHHHHHHHHHHHHHHhhcEEEeCCCCc--CCCceeeEeecCCCceEEEEEccccc
Q 012950          385 LPFSSGPRICVGLNFAATEAKIALSMILQRYRFNLSPSYV--HSPVLVVTLRPQHGLQVIFQPLSVNQ  450 (452)
Q Consensus       385 ~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~--~~~~~~~~~~p~~~~~v~~~~r~~~~  450 (452)
                      +|||.|+|.|+|++||++|++++++.|+++|+|++.++..  .......++.|..+++|.+++|+..+
T Consensus       411 ~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~r~~~~  478 (485)
T 3nxu_A          411 TPFGSGPRNCIGMRFALMNMKLALIRVLQNFSFKPCKETQIPLKLSLGGLLQPEKPVVLKVESRDGTV  478 (485)
T ss_dssp             CTTCCSTTSCTTHHHHHHHHHHHHHHHHTTEEEECCTTCCSSCCBCSSSSCCBSSCCEEEEEEC----
T ss_pred             cCCCCCCcCCchHHHHHHHHHHHHHHHHHhcEEEeCCCCCCCcccCCCeeccCCCCeEEEEEEccCCC
Confidence            9999999999999999999999999999999999976532  22223456789889999999998654


No 7  
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=100.00  E-value=1.8e-67  Score=525.35  Aligned_cols=412  Identities=20%  Similarity=0.326  Sum_probs=330.3

Q ss_pred             CceeeeccCcceEEeCCHHHHHHHHhcCCCCCCCCCchhhHHhh-hcCceeccCCccHHHHHhhhccccchhhh--hhhc
Q 012950            1 MNFLTWYGSRAQLVITQPELIKEILSNSDGTYPKVQAPGFLRKI-LGDGLVTAGGENWHRQRKLATLAFYAESL--RVTK   77 (452)
Q Consensus         1 ~~~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~~~~~~~~~~~-~g~~l~~~~~~~w~~~Rr~~~~~f~~~~l--~~~~   77 (452)
                      +||++++|+.++++++||+++++|+.++...|++++........ .|.|+++.+|+.|+++||++.++|+..++  +   
T Consensus        45 ~v~~~~~~~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~~~~~~~~l~~~~g~~~~~~Rr~~~~~f~~~~~~~~---  121 (476)
T 2fdv_A           45 PVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWVFKGYGVVFSNGERAKQLRRFSIATLRDFGVGKR---  121 (476)
T ss_dssp             SEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCCHHHHHHHTTCSSSSCCHHHHHHHHHHHHHHHHHTTTTSH---
T ss_pred             CEEEEEECCccEEEECCHHHHHHHHhcChHhhCCCCCcHHHhhhcCCCCeEecCchHHHHHHHHHHHHHHHhCCChh---
Confidence            58999999999999999999999997766578653321222222 35788888999999999999999988776  5   


Q ss_pred             chhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhHHHHHHHHHHHhhcCCCccchhhHHHH
Q 012950           78 SNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEFKLLTSEIISRTAFGSSYLEGESIFNK  157 (452)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~  157 (452)
                                             .+.+.+.++++.+++.+...+++++|+.+++..+++|+|+.++||.+++..++....
T Consensus       122 -----------------------~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~  178 (476)
T 2fdv_A          122 -----------------------GIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLS  178 (476)
T ss_dssp             -----------------------HHHHHHHHHHHHHHHHHHHTTTCCBCCHHHHHHHHHHHHHHHHHSSCCCTTCHHHHH
T ss_pred             -----------------------hHHHHHHHHHHHHHHHHHhcCCCccChHHHHHHHHHHHHHHHHcCCcCCCCCHHHHH
Confidence                                   789999999999999997654578999999999999999999999988633322222


Q ss_pred             HHh-hHHHHhhh-----hhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHhc
Q 012950          158 LTN-MSFLASRN-----AYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKAY  231 (452)
Q Consensus       158 ~~~-~~~~~~~~-----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~  231 (452)
                      +.. ........     .....+|++.+++| ...++..+..+.+.+++.+.++++++....    +...|+++.|++..
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~-~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~----~~~~d~l~~ll~~~  253 (476)
T 2fdv_A          179 LLRMMLGIFQFTSTSTGQLYEMFSSVMKHLP-GPQQQAFQLLQGLEDFIAKKVEHNQRTLDP----NSPRDFIDSFLIRM  253 (476)
T ss_dssp             HHHHHHHHHHHHTSHHHHHHHHHHHHHTTSC-SHHHHHHHHHHHHHHHHHHHHHHHHTTCCT----TSCCSHHHHHHHHH
T ss_pred             HHHHHHHHHHhhcccccchhhhhhhHHHhcC-cHHHHHHHHHHHHHHHHHHHHHHHHHhcCC----CCCccHHHHHHHHH
Confidence            211 11111110     01224565225555 233455667778888888888877653211    14579999999764


Q ss_pred             CC--CCCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCC-CCCChhhccccHHHHHH
Q 012950          232 HD--PDMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQ-KNPAPDGIGKLKTMSMV  308 (452)
Q Consensus       232 ~~--~~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~-~~~~~~~~~~lp~l~a~  308 (452)
                      .+  ...+..+++++++++++.+++||+|||+++++|++++|++||++|++|++||++++++ +.++.+++++||||+||
T Consensus       254 ~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~  333 (476)
T 2fdv_A          254 QEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAV  333 (476)
T ss_dssp             HHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSCCCGGGGGGCHHHHHH
T ss_pred             HhcccCccccccHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhcCCCCCChhhhhcChHHHHH
Confidence            21  1123468999999999999999999999999999999999999999999999999986 56899999999999999


Q ss_pred             HHHhhcCCCCCC-CccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCccccc
Q 012950          309 INESLRLYPPAV-NISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPF  387 (452)
Q Consensus       309 i~E~lRl~p~~~-~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~F  387 (452)
                      |+|+||++|+++ .++|++.+|++++||.|||||.|.++.+++||||++| +||++|+||||+++....  .....|+||
T Consensus       334 i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~-~dp~~F~PeR~l~~~~~~--~~~~~~lpF  410 (476)
T 2fdv_A          334 IHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFF-SNPQDFNPQHFLNEKGQF--KKSDAFVPF  410 (476)
T ss_dssp             HHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEECHHHHHTCTTTC-SSTTSCCGGGGBCTTSCB--CCCTTCCTT
T ss_pred             HHHHHHhcCCcccCcceeccCCeeECCEeeCCCCEEEeehHHhhCChhhc-CCccccCchhhCCCCCCC--CCCcCcccC
Confidence            999999999999 5699999999999999999999999999999999999 999999999999753321  245689999


Q ss_pred             CCCCCCCcchHHHHHHHHHHHHHHHhhcEEEeCCCCc---CCC-ceeeEeecCCCceEEEEEcc
Q 012950          388 SSGPRICVGLNFAATEAKIALSMILQRYRFNLSPSYV---HSP-VLVVTLRPQHGLQVIFQPLS  447 (452)
Q Consensus       388 g~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~---~~~-~~~~~~~p~~~~~v~~~~r~  447 (452)
                      |.|+|.|+|++||.+|++++++.|+++|++++.++..   ... ..+.+..| .++.|.+++|+
T Consensus       411 G~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p-~~~~v~~~~R~  473 (476)
T 2fdv_A          411 SIGKRNCFGEGLARMELFLFFTTVMQNFRLKSSQSPKDIDVSPKHVGFATIP-RNYTMSFLPRH  473 (476)
T ss_dssp             CCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCCSCSEESSSEEC-CCCCEEEEEC-
T ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHhhcEEEcCCCCCCCCccccccceeecC-CceEEEEEecc
Confidence            9999999999999999999999999999999986642   222 34556778 68999999996


No 8  
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=100.00  E-value=2.9e-67  Score=524.11  Aligned_cols=418  Identities=18%  Similarity=0.269  Sum_probs=330.1

Q ss_pred             CceeeeccCcceEEeCCHHHHHHHHhcCCCCCCCCCchhhHHhhhcCceeccCCccHHHHHhhhccccchhhhhhhcchh
Q 012950            1 MNFLTWYGSRAQLVITQPELIKEILSNSDGTYPKVQAPGFLRKILGDGLVTAGGENWHRQRKLATLAFYAESLRVTKSNC   80 (452)
Q Consensus         1 ~~~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~~~~~~~~~~~~g~~l~~~~~~~w~~~Rr~~~~~f~~~~l~~~~~~~   80 (452)
                      +||++++|+.++|+++||+++++||.+++..|++++....+....+.|+++.+|+.|+++||++.+.|+...+.      
T Consensus        45 ~v~~~~~g~~~~vvv~~~~~v~~il~~~~~~f~~r~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~l~~~~~~------  118 (476)
T 3e6i_A           45 PVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLPAFHAHRDRGIIFNNGPTWKDIRRFSLTTLRNYGMG------  118 (476)
T ss_dssp             SEEEEEETTEEEEEECSHHHHHHHHHTSTTTTCEECCCGGGGGGTTSSSTTCCSTTHHHHHHHHHHHHHHTC-C------
T ss_pred             CEEEEEECCccEEEECCHHHHHHHHhcchHhhCCCCCCchhheecCCCEEecCCcHHHHHHHHHHHHHHhcCCC------
Confidence            58999999999999999999999999877678655433344444555899999999999999887777665442      


Q ss_pred             hhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhHHHHHHHHHHHhhcCCCccchhhH-HHHHH
Q 012950           81 LMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEFKLLTSEIISRTAFGSSYLEGESI-FNKLT  159 (452)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~~~~-~~~~~  159 (452)
                                        .+.+.+.+.++++.+++.+....++++|+..++..+++|+|+.++||.+++..++. .....
T Consensus       119 ------------------~~~~~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~  180 (476)
T 3e6i_A          119 ------------------KQGNESRIQREAHFLLEALRKTQGQPFDPTFLIGCAPCNVIADILFRKHFDYNDEKFLRLMY  180 (476)
T ss_dssp             ------------------CSHHHHHHHHHHHHHHHHHHTTTTSCBCTHHHHTHHHHHHHHHHHHSCCCCTTCHHHHHHHH
T ss_pred             ------------------chHHHHHHHHHHHHHHHHHHHhCCCCcChHHHHHHHHHHHHHHHHcCCCCCCCCHHHHHHHH
Confidence                              01577899999999999997655678999999999999999999999988744332 22222


Q ss_pred             hhHHHHhh---h--hhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHhcCCC
Q 012950          160 NMSFLASR---N--AYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKAYHDP  234 (452)
Q Consensus       160 ~~~~~~~~---~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~  234 (452)
                      .....+..   .  .....+|.+..+++. ..++..+..+.+.+++.+.++++++....+    ...|+++.|+....++
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~p~~~~~lp~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----~~~d~~~~ll~~~~~~  255 (476)
T 3e6i_A          181 LFNENFHLLSTPWLQLYNNFPSFLHYLPG-SHRKVIKNVAEVKEYVSERVKEHHQSLDPN----CPRDLTDCLLVEMEKE  255 (476)
T ss_dssp             HHHHHHHHTTSHHHHHHHHSHHHHTTSCS-HHHHHHHHHHHHHHHHHHHHHHHHHTCCTT----SCCSHHHHHHHHHHSS
T ss_pred             HHHHHHHHhcchhHHHHHHHHHHHHHcCc-HHHHHHHHHHHHHHHHHHHHHHHhhcCCCC----CCccHHHHHHHHHHhc
Confidence            22221111   1  112334522255553 344566677788888888888877643322    3579999999764332


Q ss_pred             --CCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCC-CCCChhhccccHHHHHHHHH
Q 012950          235 --DMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQ-KNPAPDGIGKLKTMSMVINE  311 (452)
Q Consensus       235 --~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~-~~~~~~~~~~lp~l~a~i~E  311 (452)
                        +.+..+++++++++++.+++||+|||+++++|++++|++||++|++|++||+++++. +.++.+++++||||+|||+|
T Consensus       256 ~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~lpyl~a~i~E  335 (476)
T 3e6i_A          256 KHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYMDAVVHE  335 (476)
T ss_dssp             SSCSSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTTTTSCCCGGGGGGCHHHHHHHHH
T ss_pred             ccCCCCCcCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhcCCCCCCChhhccCCchHHHHHHH
Confidence              123468999999999999999999999999999999999999999999999999984 67899999999999999999


Q ss_pred             hhcCCCCCCC-ccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcccccCCC
Q 012950          312 SLRLYPPAVN-ISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPFSSG  390 (452)
Q Consensus       312 ~lRl~p~~~~-~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G  390 (452)
                      +||++|++|. .+|.+.+|++++||.|||||.|+++.+++||||++| +||++|+||||+++....  .....|+|||.|
T Consensus       336 ~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~-~~p~~F~PeR~l~~~~~~--~~~~~~~pFg~G  412 (476)
T 3e6i_A          336 IQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEF-PDPEKFKPEHFLNENGKF--KYSDYFKPFSTG  412 (476)
T ss_dssp             HHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEECSHHHHTCTTTS-SSTTSCCGGGGBCTTSSB--CCCTTCCTTCCS
T ss_pred             HHHhccCCCccccccCCCCeeEcCEEeCCCCEEEechHHhhCCcccC-CCccccCchhhcCCCCCc--cCccceecCCCC
Confidence            9999999996 699999999999999999999999999999999999 999999999999764432  256689999999


Q ss_pred             CCCCcchHHHHHHHHHHHHHHHhhcEEEeCCCC---cCCCc-eeeEeecCCCceEEEEEcccccC
Q 012950          391 PRICVGLNFAATEAKIALSMILQRYRFNLSPSY---VHSPV-LVVTLRPQHGLQVIFQPLSVNQR  451 (452)
Q Consensus       391 ~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~---~~~~~-~~~~~~p~~~~~v~~~~r~~~~~  451 (452)
                      +|.|+|++||.+|++++++.|+++|+|+++.+.   ..... .+.+..| .+++|.|++|+..+|
T Consensus       413 ~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~R~~~~~  476 (476)
T 3e6i_A          413 KRVCAGEGLARMELFLLLCAILQHFNLKPLVDPKDIDLSPIHIGFGCIP-PRYKLCVIPRSHHHH  476 (476)
T ss_dssp             TTCCTTHHHHHHHHHHHHHHHHHHEEEEESSCTTTCCCSCSEESSSEEC-CCCCEEEEECC----
T ss_pred             CccCccHHHHHHHHHHHHHHHHHhcEeecCCCCCCCCCCcccCccccCC-CCeEEEEEeccccCC
Confidence            999999999999999999999999999985321   11221 3344455 489999999987654


No 9  
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=100.00  E-value=1.9e-67  Score=525.41  Aligned_cols=412  Identities=19%  Similarity=0.313  Sum_probs=326.1

Q ss_pred             CceeeeccCcceEEeCCHHHHHHHHhcCCCCCCCCCchhhHHh-hhcCceeccCCccHHHHHhhhccccchhh--hhhhc
Q 012950            1 MNFLTWYGSRAQLVITQPELIKEILSNSDGTYPKVQAPGFLRK-ILGDGLVTAGGENWHRQRKLATLAFYAES--LRVTK   77 (452)
Q Consensus         1 ~~~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~~~~~~~~~~-~~g~~l~~~~~~~w~~~Rr~~~~~f~~~~--l~~~~   77 (452)
                      +||++++|+.+.|+++||+++++|+.++...|.+++....... ..|.|+++.+|+.|+++||++.+.|++..  ++   
T Consensus        46 ~v~~~~~g~~~~v~v~~~~~~~~il~~~~~~f~~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~~~~~~~~~---  122 (477)
T 1r9o_A           46 PVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLAERANRGFGIVFSNGKKWKEIRRFSLMTLRNFGMGKR---  122 (477)
T ss_dssp             SEEEEESSSCEEEEECSHHHHHHHHTTTTTTTCEECCCSCCCTTTCTTSSTTCCHHHHHHHHHHHHHHHTTSSSCSS---
T ss_pred             CEEEEEECCCcEEEECCHHHHHHHHhcccHhhCCCCcchhhhhccCCCceEecCChHHHHHHHHHHHHHHHhCCChH---
Confidence            5899999999999999999999999776657865332111121 24578888899999999999999998873  45   


Q ss_pred             chhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhHHHHHHHHHHHhhcCCCccchhhHHH-
Q 012950           78 SNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEFKLLTSEIISRTAFGSSYLEGESIFN-  156 (452)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~-  156 (452)
                                             .+.+.+.++++.+++.+....++++|+.+++..+++|+|+.++||.+++..++... 
T Consensus       123 -----------------------~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~  179 (477)
T 1r9o_A          123 -----------------------SIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFHKRFDYKDQQFLN  179 (477)
T ss_dssp             -----------------------CHHHHHHHHHHHHHHHHHTTTTSCBCTHHHHHHHHHHHHHHHHHSCCCCTTCHHHHH
T ss_pred             -----------------------HHHHHHHHHHHHHHHHHHhcCCCccChHHHHHHHHHHHHHHHHccCcCCCCCHHHHH
Confidence                                   78999999999999999764457899999999999999999999998764332222 


Q ss_pred             HHHhhHHHHhhh-----hhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHhc
Q 012950          157 KLTNMSFLASRN-----AYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKAY  231 (452)
Q Consensus       157 ~~~~~~~~~~~~-----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~  231 (452)
                      ........+...     .....+|++.+++|.. .++..+..+.+.+++.+.++++++....+    ...|+++.|+...
T Consensus       180 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~lp~~-~~~~~~~~~~~~~~~~~~i~~r~~~~~~~----~~~d~l~~ll~~~  254 (477)
T 1r9o_A          180 LMEKLNENIKILSSPWIQICNNFSPIIDYFPGT-HNKLLKNVAFMKSYILEKVKEHQESMDMN----NPQDFIDCFLMKM  254 (477)
T ss_dssp             HHHHHHHHHHHHTCCBC-------CCCSCCTTC-HHHHHHHHHHHHHHHHHHHHHHHHTCCTT----CCCSHHHHHHHHH
T ss_pred             HHHHHHHHHHhhccchhHHHhhccHHHHhcchH-HHHHHHHHHHHHHHHHHHHHHHHhccCCC----CchHHHHHHHHHH
Confidence            222222221110     1122456533455532 24556677788888999988877542211    4579999998643


Q ss_pred             C--CCCCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCC-CCCChhhccccHHHHHH
Q 012950          232 H--DPDMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQ-KNPAPDGIGKLKTMSMV  308 (452)
Q Consensus       232 ~--~~~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~-~~~~~~~~~~lp~l~a~  308 (452)
                      .  +.+.+..++++++++++..+++||+|||+++++|++++|++||++|++|++||++++++ +.++.+++++||||+||
T Consensus       255 ~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~lpyl~a~  334 (477)
T 1r9o_A          255 EKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAV  334 (477)
T ss_dssp             HHHTTSCSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSCCCGGGGGGCHHHHHH
T ss_pred             HhhhccCCCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCCCCCCChHhhccCcHHHHH
Confidence            2  11123469999999999999999999999999999999999999999999999999985 67899999999999999


Q ss_pred             HHHhhcCCCCCCC-ccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCccccc
Q 012950          309 INESLRLYPPAVN-ISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPF  387 (452)
Q Consensus       309 i~E~lRl~p~~~~-~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~F  387 (452)
                      |+|+||++|+++. ++|.+.+|++++||.|||||.|.++.|++||||++| +||++|+||||+++.+..  .....|+||
T Consensus       335 i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~-~dP~~F~PeR~l~~~~~~--~~~~~~~pF  411 (477)
T 1r9o_A          335 VHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEF-PNPEMFDPHHFLDEGGNF--KKSKYFMPF  411 (477)
T ss_dssp             HHHHHHHHTSSTTCSCEECSSCEEETTEEECTTCEEEECSHHHHTCTTTS-SSTTSCCGGGGBCTTSCB--CCCTTCCTT
T ss_pred             HHHHHHhcCCCCCCCceeccCCccccceecCCCCEEEEecHHhhCCcccC-CCccccCccceECCCCCc--CccccccCC
Confidence            9999999999995 699999999999999999999999999999999999 999999999999754322  245689999


Q ss_pred             CCCCCCCcchHHHHHHHHHHHHHHHhhcEEEeCCCCc---CCC-ceeeEeecCCCceEEEEEcc
Q 012950          388 SSGPRICVGLNFAATEAKIALSMILQRYRFNLSPSYV---HSP-VLVVTLRPQHGLQVIFQPLS  447 (452)
Q Consensus       388 g~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~---~~~-~~~~~~~p~~~~~v~~~~r~  447 (452)
                      |.|+|.|+|++||.+|++++++.|+++|+|++.++..   ... ..+.+..| .++.|.+++|+
T Consensus       412 G~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~R~  474 (477)
T 1r9o_A          412 SAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDPKNLDTTPVVNGFASVP-PFYQLCFIPIH  474 (477)
T ss_dssp             CCGGGSCTTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCCCCBCCSSSCBC-CCCCEEEEECC
T ss_pred             CCccCCCCCHHHHHHHHHHHHHHHHHhcEEecCCCCCCCCccCCcCceeecC-CCeEEEEEEec
Confidence            9999999999999999999999999999999976532   112 23455677 68999999996


No 10 
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=100.00  E-value=1.3e-67  Score=521.43  Aligned_cols=397  Identities=25%  Similarity=0.378  Sum_probs=326.6

Q ss_pred             CceeeeccCcceEEeCCHHHHHHHHhcCCCCCCCCCchhhHHhhhcC-ceeccCCccHHHHHhhhccccchhhhhhhcch
Q 012950            1 MNFLTWYGSRAQLVITQPELIKEILSNSDGTYPKVQAPGFLRKILGD-GLVTAGGENWHRQRKLATLAFYAESLRVTKSN   79 (452)
Q Consensus         1 ~~~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~~~~~~~~~~~~g~-~l~~~~~~~w~~~Rr~~~~~f~~~~l~~~~~~   79 (452)
                      +||++++++.+.++++||+++++|+.+++..|+... .......+|. ++++.+|+.|+++||++.++|++++++     
T Consensus        45 ~v~~~~~~g~~~vvv~~~~~~~~il~~~~~~~~~~~-~~~~~~~~g~~~l~~~~g~~~~~~R~~~~~~f~~~~l~-----  118 (444)
T 2ve3_A           45 PIFKTRLFGKNVIFISGALANRFLFTKEQETFQATW-PLSTRILLGPNALATQMGEIHRSRRKILYQAFLPRTLD-----  118 (444)
T ss_dssp             SSEEEEETTEEEEEECSHHHHHHHTSSCTTTEEEEC-CHHHHHHHCTTSGGGCCHHHHHHHHHHHHGGGCHHHHH-----
T ss_pred             CeEEEeeCCCCEEEEcCHHHHHHHHhCCCcccccch-hHHHHHHhCccccccCCchHHHHHHHHHHhhcCHHHHH-----
Confidence            588999888899999999999999987654565222 2234445564 888889999999999999999999999     


Q ss_pred             hhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhHHHHHHHHHHHhhcCCCccch-hhHHHHH
Q 012950           80 CLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEFKLLTSEIISRTAFGSSYLEG-ESIFNKL  158 (452)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~-~~~~~~~  158 (452)
                                           .+.+.+.++++.+++.|..  ++++|+.+++..+++++++.++|| ..... .++...+
T Consensus       119 ---------------------~~~~~i~~~~~~l~~~l~~--~~~vd~~~~~~~~~~~vi~~~~fG-~~~~~~~~~~~~~  174 (444)
T 2ve3_A          119 ---------------------SYLPKMDGIVQGYLEQWGK--ANEVIWYPQLRRMTFDVAATLFMG-EKVSQNPQLFPWF  174 (444)
T ss_dssp             ---------------------TTHHHHHHHHHHHHHHHHH--SSEEEHHHHHHHHHHHHHHHHHTC-HHHHSCTTHHHHH
T ss_pred             ---------------------HHHHHHHHHHHHHHHHhcC--CCcEeHHHHHHHHHHHHHHHHHcC-CCcccHHHHHHHH
Confidence                                 9999999999999999965  578999999999999999999999 33211 2222222


Q ss_pred             HhhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHhcCCCCCCC
Q 012950          159 TNMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKAYHDPDMTK  238 (452)
Q Consensus       159 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~  238 (452)
                      ..+..    ..  ..+|   .++|.....+..++.+.+.+++.+.++++++.   +   ....|+++.|++...++  +.
T Consensus       175 ~~~~~----~~--~~~~---~~~p~~~~~~~~~~~~~~~~~~~~~i~~r~~~---~---~~~~d~l~~ll~~~~~~--~~  237 (444)
T 2ve3_A          175 ETYIQ----GL--FSLP---IPLPNTLFGKSQRARALLLAELEKIIKARQQQ---P---PSEEDALGILLAARDDN--NQ  237 (444)
T ss_dssp             HHHHH----HH--SSCC---CCSTTSHHHHHHHHHHHHHHHHHHHHHHHHTS---C---CCCSSHHHHHHHCBCTT--SC
T ss_pred             HHHHH----HH--hcCC---ccCCCcHHHHHHHHHHHHHHHHHHHHHHHhcC---C---CCccCHHHHHHhccccC--CC
Confidence            21111    11  1122   22333333455666777888888888877653   1   14579999999875432  34


Q ss_pred             CCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHHHHHHHHHhhcCCCC
Q 012950          239 RISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKTMSMVINESLRLYPP  318 (452)
Q Consensus       239 ~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~  318 (452)
                      .++++++++++..+++||+|||+++++|++++|++||++|++|++|++.++++..++.+++.+||||+|||+|+||++|+
T Consensus       238 ~l~~~~i~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~  317 (444)
T 2ve3_A          238 PLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLSQELTAETLKKMPYLDQVLQEVLRLIPP  317 (444)
T ss_dssp             BCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHSSCCSSCCCHHHHTTCHHHHHHHHHHHHHSCS
T ss_pred             CCCHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhccCCCCChhhhhcChHHHHHHHHHHhcCCC
Confidence            69999999999999999999999999999999999999999999999999987789999999999999999999999999


Q ss_pred             CCCccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcccccCCCCCCCcchH
Q 012950          319 AVNISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPFSSGPRICVGLN  398 (452)
Q Consensus       319 ~~~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~  398 (452)
                      ++..+|.+.+|++++||.||||+.|.++.+++||||++| +||++|+||||+++.... ...+..++|||+|+|.|+|++
T Consensus       318 ~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~l~~~~~~-~~~~~~~~pFG~G~r~C~G~~  395 (444)
T 2ve3_A          318 VGGGFRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLY-PDPEKFDPERFTPDGSAT-HNPPFAHVPFGGGLRECLGKE  395 (444)
T ss_dssp             SCEEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTS-SSTTSCCGGGSSTTSTTT-TSCTTSCCTTCCGGGCCSCHH
T ss_pred             ccCccceeCCCeeECCEEECCCCEEEechHHhcCChhhc-CCcCccCccccCCCCccc-CCCCceeeCCCCCCccCccHH
Confidence            998899999999999999999999999999999999999 999999999999753211 124567999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhcEEEeCCCCcCCCceeeEeecCCCceEEEEEc
Q 012950          399 FAATEAKIALSMILQRYRFNLSPSYVHSPVLVVTLRPQHGLQVIFQPL  446 (452)
Q Consensus       399 ~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r  446 (452)
                      ||.+|++++++.|+++|++++.++.........++.|..+++|++++|
T Consensus       396 lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~r  443 (444)
T 2ve3_A          396 FARLEMKLFATRLIQQFDWTLLPGQNLELVVTPSPRPKDNLRVKLHSL  443 (444)
T ss_dssp             HHHHHHHHHHHHHHHHEEEEECSSCCCCEEESSSEEETTCCEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHhCEEEeCCCCCcceeccccccCCCCceEEEEeC
Confidence            999999999999999999999876433333345678999999999998


No 11 
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=100.00  E-value=6.5e-67  Score=521.81  Aligned_cols=413  Identities=21%  Similarity=0.329  Sum_probs=329.6

Q ss_pred             CceeeeccCcceEEeCCHHHHHHHHhcCCCCCCCCCchhhHHhhh-cCcee-ccCCccHHHHHhhhccccchhhh--hhh
Q 012950            1 MNFLTWYGSRAQLVITQPELIKEILSNSDGTYPKVQAPGFLRKIL-GDGLV-TAGGENWHRQRKLATLAFYAESL--RVT   76 (452)
Q Consensus         1 ~~~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~~~~~~~~~~~~-g~~l~-~~~~~~w~~~Rr~~~~~f~~~~l--~~~   76 (452)
                      +||++++|+.++++|+||+++++|+.+++..|++++.......+. +.|++ ..+|+.|+++||++.++|+..++  .  
T Consensus        49 ~v~~~~~g~~~~v~v~~~~~~~~vl~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~~~~--  126 (481)
T 3czh_A           49 EIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMTKMGGLLNSRYGRGWVDHRRLAVNSFRYFGYGQK--  126 (481)
T ss_dssp             SEEEEEETTEEEEEEESHHHHHHHHTTTTTTTCBCCCCHHHHHHHTTCSSTTCCSSHHHHHHHHHHHHHHHHTTTTST--
T ss_pred             CEEEEEECCccEEEECCHHHHHHHHhhchHhhCCCCCcHHHHhhcCCCCeEeCCCChHHHHHHHHHHHHHHHhcCChH--
Confidence            588999999999999999999999988766786544222333333 34644 46899999999999999987654  4  


Q ss_pred             cchhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhHHHHHHHHHHHhhcCCCccchhhHHH
Q 012950           77 KSNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEFKLLTSEIISRTAFGSSYLEGESIFN  156 (452)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~  156 (452)
                                              .+.+.+.++++.+++.+...+++++|+...+..+++|+|+.++||.+++..++...
T Consensus       127 ------------------------~~~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~  182 (481)
T 3czh_A          127 ------------------------SFESKILEETKFFNDAIETYKGRPFDFKQLITNAVSNITNLIIFGERFTYEDTDFQ  182 (481)
T ss_dssp             ------------------------THHHHHHHHHHHHHHHHHTTTTCCBCCHHHHHHHHHHHHHHHHHSSCCCTTCHHHH
T ss_pred             ------------------------HHHHHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHHHHHHHHcCCCCCCCCHHHH
Confidence                                    78999999999999999765456899999999999999999999998863332222


Q ss_pred             HH-HhhHHHHhh---hh--hhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHh
Q 012950          157 KL-TNMSFLASR---NA--YKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKA  230 (452)
Q Consensus       157 ~~-~~~~~~~~~---~~--~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~  230 (452)
                      .+ .........   ..  ....+|++ .++|....++..+..+.+.+++.+.++++++....    +...|+++.|++.
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~p~l-~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~----~~~~d~l~~ll~~  257 (481)
T 3czh_A          183 HMIELFSENVELAASASVFLYNAFPWI-GILPFGKHQQLFRNAAVVYDFLSRLIEKASVNRKP----QLPQHFVDAYLDE  257 (481)
T ss_dssp             HHHHHHHHHHHHTTSHHHHHHHHCGGG-GGCSSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCT----TCCSSHHHHHHHH
T ss_pred             HHHHHHHHHHhhhccchhHHhhhhHHH-HhCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCC----CchHHHHHHHHHH
Confidence            22 111111111   11  23446766 66665445566677778888888888887653211    1457999999976


Q ss_pred             cCC--CCCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCC-CCCChhhccccHHHHH
Q 012950          231 YHD--PDMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQ-KNPAPDGIGKLKTMSM  307 (452)
Q Consensus       231 ~~~--~~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~-~~~~~~~~~~lp~l~a  307 (452)
                      ..+  .+.+..++++++++++..+++||+|||+++++|++++|++||++|++|++||+++++. +.++.+++++||||+|
T Consensus       258 ~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~~lpyl~a  337 (481)
T 3czh_A          258 MDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWDDKCKMPYTEA  337 (481)
T ss_dssp             HHHTTTCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSCCCGGGGGGCHHHHH
T ss_pred             HHhcccCccccccHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHHHHhcCCCCCCChhhhhhChHHHH
Confidence            422  1123469999999999999999999999999999999999999999999999999985 6799999999999999


Q ss_pred             HHHHhhcCCCCCCC-ccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcccc
Q 012950          308 VINESLRLYPPAVN-ISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLP  386 (452)
Q Consensus       308 ~i~E~lRl~p~~~~-~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~  386 (452)
                      ||+|+||++|+++. .+|++.+|++++||.|||||.|+++.|++||||++| +||++|+||||+++....  ..+..++|
T Consensus       338 ~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~l~~~~~~--~~~~~~lp  414 (481)
T 3czh_A          338 VLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYW-RDPEVFHPERFLDSSGYF--AKKEALVP  414 (481)
T ss_dssp             HHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTC-SSTTSCCGGGGBCTTSCB--CCCTTCCT
T ss_pred             HHHHHHhhccccccCcceeecCCeEEeCEEcCCCCEEEechHHHhCCcccC-CCccccCCCceeCCCCCC--cCCcceeC
Confidence            99999999999995 699999999999999999999999999999999999 999999999999753321  35678999


Q ss_pred             cCCCCCCCcchHHHHHHHHHHHHHHHhhcEEEeCCCCcC--CCceeeEeecCCCceEEEEEccc
Q 012950          387 FSSGPRICVGLNFAATEAKIALSMILQRYRFNLSPSYVH--SPVLVVTLRPQHGLQVIFQPLSV  448 (452)
Q Consensus       387 Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~--~~~~~~~~~p~~~~~v~~~~r~~  448 (452)
                      ||.|+|.|+|++||.+|++++++.|+++|+++++++...  ....+.+..|. ++.+.++||.-
T Consensus       415 FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~  477 (481)
T 3czh_A          415 FSLGRRHCLGEHLARMEMFLFFTALLQRFHLHFPHELVPDLKPRLGMTLQPQ-PYLICAERRHH  477 (481)
T ss_dssp             TCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECGGGCCCCCCCCSSSSCCCC-CCCBEEEECC-
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHheEEeCCCCCCCCcccCCCceecCC-ceEEEEEeccc
Confidence            999999999999999999999999999999998654321  11224455665 78899999864


No 12 
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=100.00  E-value=2.1e-67  Score=529.33  Aligned_cols=422  Identities=16%  Similarity=0.268  Sum_probs=332.2

Q ss_pred             CceeeeccCcceEEeCCHHHHHHHHhcCCCCCCCCCchhhHHhh-hcCceecc-CCccHHHHHhhhccccchhhhhhhcc
Q 012950            1 MNFLTWYGSRAQLVITQPELIKEILSNSDGTYPKVQAPGFLRKI-LGDGLVTA-GGENWHRQRKLATLAFYAESLRVTKS   78 (452)
Q Consensus         1 ~~~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~~~~~~~~~~~-~g~~l~~~-~~~~w~~~Rr~~~~~f~~~~l~~~~~   78 (452)
                      +||++++|+.++|+|+||+++++|+.+++..|.+++........ .|.|+++. +|+.|+++||++++.|+........ 
T Consensus        43 ~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~~~~~g~~l~~~~~g~~w~~~R~~~~~~~~~~~~~~~~-  121 (507)
T 3pm0_A           43 DVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPSFASFRVVSGGRSMAFGHYSEHWKVQRRAAHSMMRNFFTRQPR-  121 (507)
T ss_dssp             SEEEEEETTEEEEEECSHHHHHHHHTTTTTTSCBCCCCHHHHHGGGGTCSSSSCSSHHHHHHHHHHHHHHHHSTTSSTT-
T ss_pred             CEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCcchHHHhhcCCCceEECCCChHHHHHHHHHHHHHHHhcCCccc-
Confidence            68999999999999999999999998877788644422223322 46777554 6999999999999988765544000 


Q ss_pred             hhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhc--CCceeehhhhHHHHHHHHHHHhhcCCCccchhhHHH
Q 012950           79 NCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHS--EGKEIEVSQEFKLLTSEIISRTAFGSSYLEGESIFN  156 (452)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~--~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~  156 (452)
                                         ..+.+.+.+.++++.+++.+...  +++++|+.+++..+++|+++.++||.+++..++...
T Consensus       122 -------------------~~~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~  182 (507)
T 3pm0_A          122 -------------------SRQVLEGHVLSEARELVALLVRGSADGAFLDPRPLTVVAVANVMSAVCFGCRYSHDDPEFR  182 (507)
T ss_dssp             -------------------HHHHHHHHHHHHHHHHHHHHHHTTGGGCCBCCHHHHHHHHHHHHHHHHTSCCCCTTCHHHH
T ss_pred             -------------------hHHHHHHHHHHHHHHHHHHHHhhcccCCCcChHHHHHHHHHHHHHHHHccccCCCCCHHHH
Confidence                               00038899999999999998764  357899999999999999999999999875443332


Q ss_pred             HHHhh----HHHHhhhhhhhccccccccccCC---chhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHH
Q 012950          157 KLTNM----SFLASRNAYKIKIPLIGDFVKTS---DDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLK  229 (452)
Q Consensus       157 ~~~~~----~~~~~~~~~~~~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~  229 (452)
                      .+...    ............+|++ .++|..   ..+...+..+.+.+++.+.++++++....+.   ...|+++.|+.
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~P~l-~~lp~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---~~~d~l~~ll~  258 (507)
T 3pm0_A          183 ELLSHNEEFGRTVGAGSLVDVMPWL-QYFPNPVRTVFREFEQLNRNFSNFILDKFLRHCESLRPGA---APRDMMDAFIL  258 (507)
T ss_dssp             HHTSCHHHHHHHHSTTCCTTTCGGG-GGSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTC---CCCSHHHHHHH
T ss_pred             HHHHHHHHHHHhcccchHHHHhHHH-HHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc---CCccHHHHHHH
Confidence            22221    1111111233456766 666644   3455666777888888888888877644322   56899999996


Q ss_pred             hcCCCC------CCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCC-CCCChhhcccc
Q 012950          230 AYHDPD------MTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQ-KNPAPDGIGKL  302 (452)
Q Consensus       230 ~~~~~~------~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~-~~~~~~~~~~l  302 (452)
                      ......      .+..++++++.+++..+++||+|||+++++|++++|++||++|++|++||+++++. +.++.+++++|
T Consensus       259 ~~~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~l  338 (507)
T 3pm0_A          259 SAEKKAAGDSHGGGARLDLENVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPNL  338 (507)
T ss_dssp             HHHHHHSCC----CCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCTTSCCCGGGGGGC
T ss_pred             HhhhhccccccCCCCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCCCCCCChhhcccC
Confidence            532110      12258999999999999999999999999999999999999999999999999985 67899999999


Q ss_pred             HHHHHHHHHhhcCCCCCCC-ccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCC
Q 012950          303 KTMSMVINESLRLYPPAVN-ISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTP  381 (452)
Q Consensus       303 p~l~a~i~E~lRl~p~~~~-~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~  381 (452)
                      |||+|||+|+||++|++|. .+|.+.+|++++||.|||||.|+++.|++||||++| +||++|+||||+++++.......
T Consensus       339 pyl~avi~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~-~dp~~F~PeRfl~~~~~~~~~~~  417 (507)
T 3pm0_A          339 PYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKW-PNPENFDPARFLDKDGLINKDLT  417 (507)
T ss_dssp             HHHHHHHHHHHHHHCSSCBCSCEECSSCEEETTEEECTTCEEEEBSHHHHSCTTTC-SSSSSCCGGGGBCTTSCBCHHHH
T ss_pred             hHHHHHHHHHHhcCCCcccCCCccccCCceEcCEEECCCCEEEeChHHHhCCcccC-CCcCccCCCcccCCCCcccCCCc
Confidence            9999999999999999997 599999999999999999999999999999999999 99999999999976432110123


Q ss_pred             CcccccCCCCCCCcchHHHHHHHHHHHHHHHhhcEEEeCCCCcCCC--ceeeEeecCCCceEEEEEccc
Q 012950          382 AAFLPFSSGPRICVGLNFAATEAKIALSMILQRYRFNLSPSYVHSP--VLVVTLRPQHGLQVIFQPLSV  448 (452)
Q Consensus       382 ~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~--~~~~~~~p~~~~~v~~~~r~~  448 (452)
                      ..++|||.|+|.|+|++||.+|++++++.|+++|+|++.++.....  ..+.+..|. ++.|.+++|+.
T Consensus       418 ~~~~pFg~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~p~-~~~v~~~~R~~  485 (507)
T 3pm0_A          418 SRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFRANPNEPAKMNFSYGLTIKPK-SFKVNVTLRES  485 (507)
T ss_dssp             TTCCSSCCSTTCCSCHHHHHHHHHHHHHHHHHHEEEEECTTCCSCCCEEESSSEEEC-SCCEEEEESSC
T ss_pred             ccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHeEEecCCCCCCCCCCCCCccccCC-CcEEEEEEccc
Confidence            5899999999999999999999999999999999999987643322  223455665 68999999973


No 13 
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=100.00  E-value=1.3e-67  Score=526.34  Aligned_cols=413  Identities=22%  Similarity=0.314  Sum_probs=328.2

Q ss_pred             CceeeeccCcceEEeCCHHHHHHHHhcCCCCCCCCCchhhHHhh-hcCceeccCCccHHHHHhhhccccchhh--hhhhc
Q 012950            1 MNFLTWYGSRAQLVITQPELIKEILSNSDGTYPKVQAPGFLRKI-LGDGLVTAGGENWHRQRKLATLAFYAES--LRVTK   77 (452)
Q Consensus         1 ~~~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~~~~~~~~~~~-~g~~l~~~~~~~w~~~Rr~~~~~f~~~~--l~~~~   77 (452)
                      +||++++|+.+.|+++||+.+++|+.++...|.+++........ .|.|+++.+|+.|+++||++.+.|++..  ++   
T Consensus        45 ~v~~~~~g~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~f~~~~~~~~---  121 (476)
T 1po5_A           45 DVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGYGVIFANGERWRALRRFSLATMRDFGMGKR---  121 (476)
T ss_dssp             SEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCGGGGCSCCSSCCCCCSSHHHHHHHHHHHHHHHHHSCCCHH---
T ss_pred             CEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCCcHHHHhhcCCCceEecCCcHHHHHHHHHHHHHHHhCCChh---
Confidence            58999999999999999999999997766678653321222222 3578888899999999999999998873  45   


Q ss_pred             chhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhHHHHHHHHHHHhhcCCCccchhhHHHH
Q 012950           78 SNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEFKLLTSEIISRTAFGSSYLEGESIFNK  157 (452)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~  157 (452)
                                             .+.+.+.++++.+++.|....++++|+.+++..+++|+|+.++||.+++..++....
T Consensus       122 -----------------------~~~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~  178 (476)
T 1po5_A          122 -----------------------SVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLR  178 (476)
T ss_dssp             -----------------------HHHHHHHHHHHHHHHHHHHTTTCCBCCHHHHHHHHHHHHHHHHHSSCCCTTCHHHHH
T ss_pred             -----------------------HHHHHHHHHHHHHHHHHHhcCCCccCHHHHHHHHHHHHHHHHHcCCCCCCCCHHHHH
Confidence                                   789999999999999997654578999999999999999999999988633322222


Q ss_pred             H-HhhHHHHhhh-----hhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHhc
Q 012950          158 L-TNMSFLASRN-----AYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKAY  231 (452)
Q Consensus       158 ~-~~~~~~~~~~-----~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~  231 (452)
                      + ..........     .....+|++.+++|.. .++..+..+.+.+++.+.++++++....+    ...|+++.|+...
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~P~~~~~lp~~-~~~~~~~~~~~~~~~~~~i~~r~~~~~~~----~~~d~l~~ll~~~  253 (476)
T 1po5_A          179 LLDLFFQSFSLISSFSSQVFELFSGFLKHFPGT-HRQIYRNLQEINTFIGQSVEKHRATLDPS----NPRDFIDVYLLRM  253 (476)
T ss_dssp             HHHHHHHHTTTCCTTHHHHHHHTHHHHHTSSCS-HHHHHHHHHHHHHHHHHHHHHHHTTCCTT----SCCSHHHHHHHHH
T ss_pred             HHHHHHHHHhhhcchhhHHHHhhhHHHHhcCcH-HHHHHHHHHHHHHHHHHHHHHHHHhcCCC----CcccHHHHHHHHH
Confidence            2 2121221100     1122455432455532 34556677788888888888876532111    3579999998643


Q ss_pred             CC--CCCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCC-CCCChhhccccHHHHHH
Q 012950          232 HD--PDMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQ-KNPAPDGIGKLKTMSMV  308 (452)
Q Consensus       232 ~~--~~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~-~~~~~~~~~~lp~l~a~  308 (452)
                      .+  .+.+..++++++++++..+++||+|||+++++|++++|++||++|++|++||+++++. +.++.+++++||||+||
T Consensus       254 ~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~l~~lpyl~a~  333 (476)
T 1po5_A          254 EKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAV  333 (476)
T ss_dssp             HHHTCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSCCCGGGGGGCHHHHHH
T ss_pred             HhhccCCCCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCChHHHhcCcHHHHH
Confidence            21  1123458999999999999999999999999999999999999999999999999985 66899999999999999


Q ss_pred             HHHhhcCCCCCCC-ccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCccccc
Q 012950          309 INESLRLYPPAVN-ISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPF  387 (452)
Q Consensus       309 i~E~lRl~p~~~~-~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~F  387 (452)
                      |+|+||++|+++. ++|++.+|++++||.|||||.|+++.|++||||++| +||++|+||||+++.+..  .....++||
T Consensus       334 i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rdp~~~-~dp~~F~PeR~l~~~~~~--~~~~~~lpF  410 (476)
T 1po5_A          334 IHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYF-ETPNTFNPGHFLDANGAL--KRNEGFMPF  410 (476)
T ss_dssp             HHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEECHHHHHTCTTTC-SSTTSCCGGGGBCTTSCB--CCCTTCCTT
T ss_pred             HHHHHHhccCCCCCCccccCCCceecCEecCCCCEEEeehHhHhcCcccc-CCccccCchhhCCCCCCc--cCCccccCC
Confidence            9999999999995 699999999999999999999999999999999999 999999999999754322  245689999


Q ss_pred             CCCCCCCcchHHHHHHHHHHHHHHHhhcEEEeCCCCc---CCC-ceeeEeecCCCceEEEEEccc
Q 012950          388 SSGPRICVGLNFAATEAKIALSMILQRYRFNLSPSYV---HSP-VLVVTLRPQHGLQVIFQPLSV  448 (452)
Q Consensus       388 g~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~---~~~-~~~~~~~p~~~~~v~~~~r~~  448 (452)
                      |.|+|.|+|++||.+|++++++.|+++|++++.++..   ... ..+.+..| .++.|.+++|+.
T Consensus       411 G~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~p-~~~~v~~~~R~~  474 (476)
T 1po5_A          411 SLGKRICLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLTPRESGVGNVP-PSYQIRFLARHH  474 (476)
T ss_dssp             CCSTTCCTTHHHHHHHHHHHHHHHHHHEEEECSSCGGGCCCCCCSTTSSCCC-CCCCBEEEECC-
T ss_pred             CCccccCcchHHHHHHHHHHHHHHHhceEEeCCCCCCCCCccCCcCceeecC-cceEEEEEecCC
Confidence            9999999999999999999999999999999976532   112 23455677 689999999963


No 14 
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=100.00  E-value=1.5e-67  Score=528.82  Aligned_cols=406  Identities=21%  Similarity=0.307  Sum_probs=324.7

Q ss_pred             CceeeeccCcceEEeCCHHHHHHHHhcCCCCCCCCCchhhHHhh-hcC-ceeccC-CccHHHHHhhhccccchhhhhhhc
Q 012950            1 MNFLTWYGSRAQLVITQPELIKEILSNSDGTYPKVQAPGFLRKI-LGD-GLVTAG-GENWHRQRKLATLAFYAESLRVTK   77 (452)
Q Consensus         1 ~~~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~~~~~~~~~~~-~g~-~l~~~~-~~~w~~~Rr~~~~~f~~~~l~~~~   77 (452)
                      |||++++|+.++|+|+||+++++|+.+++..|++++........ .|. |+++.+ |+.|+++||+++++|+.+.++   
T Consensus        58 ~v~~~~~g~~~~vvv~~~~~~~~il~~~~~~f~~r~~~~~~~~~~~~~~~l~~~~~g~~w~~~Rr~~~~~f~~~~~~---  134 (496)
T 3qz1_A           58 PVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIPSYKLVSQRCQDISLGDYSLLWKAHKKLTRSALLLGTRS---  134 (496)
T ss_dssp             SEEEECSSSSCEEEECSTTHHHHTTTTSCSTTCBCCCCTTTTTSCTTCCCSSSSCCSHHHHHHHHHHHHHHHC--CC---
T ss_pred             CEEEEEeCCcCEEEECCHHHHHHHHHhCcHhhCCCCCcchHHHhcCCCCceEECCCCHHHHHHHHHHHHHHhhccHh---
Confidence            68999999999999999999999998877678654422222222 344 888888 999999999999999976677   


Q ss_pred             chhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhHHHHHHHHHHHhhcCCCccchhhH---
Q 012950           78 SNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEFKLLTSEIISRTAFGSSYLEGESI---  154 (452)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~~~~---  154 (452)
                                             .+.+.+.++++.+++.+.+..++++|+..++..+++|+|+.++||.  .++.+.   
T Consensus       135 -----------------------~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~dvi~~~~fG~--~~~~~~~~~  189 (496)
T 3qz1_A          135 -----------------------SMEPWVDQLTQEFCERMRVQAGAPVTIQKEFSLLTCSIICYLTFGN--KEDTLVHAF  189 (496)
T ss_dssp             -----------------------CHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHTHHHHHHTTTTSTTC--CCHHHHHHH
T ss_pred             -----------------------hHHHHHHHHHHHHHHHHHhcCCCccCHHHHHHHHHHHHHHHHhcCC--CCChHHHHH
Confidence                                   8999999999999999976556789999999999999999999998  222221   


Q ss_pred             HHHHHhhHHHHhh--hhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHhcC
Q 012950          155 FNKLTNMSFLASR--NAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKAYH  232 (452)
Q Consensus       155 ~~~~~~~~~~~~~--~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~  232 (452)
                      ...+.........  ......+|++ .++|....++..+..+.+.+++.+.++++++....+    ...|+++.|++...
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~P~l-~~lp~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----~~~d~l~~ll~~~~  264 (496)
T 3qz1_A          190 HDCVQDLMKTWDHWSIQILDMVPFL-RFFPNPGLWRLKQAIENRDHMVEKQLRRHKESMVAG----QWRDMTDYMLQGVG  264 (496)
T ss_dssp             HHHHHTTTTTTSSHHHHHHHHCGGG-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSS----CCSSSHHHHTTSST
T ss_pred             HHHHHHHHHHhccchhHHHHhHHHH-HhCChHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC----CccchHHHHHHHHH
Confidence            1111111111111  1223456766 667655556677778888888888888877653322    46799999998754


Q ss_pred             CC--CCC-CCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCC-----CCCChhhccccHH
Q 012950          233 DP--DMT-KRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQ-----KNPAPDGIGKLKT  304 (452)
Q Consensus       233 ~~--~~~-~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~-----~~~~~~~~~~lp~  304 (452)
                      +.  ..+ ..++++++.+++..+++||+|||+++++|++++|++||++|+|+++||+++++.     +.+ .+++++|||
T Consensus       265 ~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~-~~~~~~lpy  343 (496)
T 3qz1_A          265 RQRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVT-YKDRARLPL  343 (496)
T ss_dssp             TCCC-----CCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCSSSSSSCCS-TTGGGSCHH
T ss_pred             hccccCCcccccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCcccCCCC-hhhhhcCcH
Confidence            32  111 269999999999999999999999999999999999999999999999999984     346 899999999


Q ss_pred             HHHHHHHhhcCCCCCCC-ccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCc
Q 012950          305 MSMVINESLRLYPPAVN-ISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAA  383 (452)
Q Consensus       305 l~a~i~E~lRl~p~~~~-~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~  383 (452)
                      |+|||+|+||++|++|. .+|++.+|++++||.|||||.|+++.|++||||++| +||++|+||||++++      ....
T Consensus       344 l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~-~dp~~F~PeR~l~~~------~~~~  416 (496)
T 3qz1_A          344 LNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVW-EQPHEFRPDRFLEPG------ANPS  416 (496)
T ss_dssp             HHHHHHHHHHHSCSSSSCCCEECSSCEECSSSEECTTCEEEECHHHHTTCTTTS-SSTTSCCCCCCC---------CCCC
T ss_pred             HHHHHHHHHHhcCCcccccCccCCCCceECCEEeCCCCEEEechHHhhCChhhc-CCcccCCcccccCCC------CCcC
Confidence            99999999999999997 599999999999999999999999999999999999 999999999999753      2237


Q ss_pred             ccccCCCCCCCcchHHHHHHHHHHHHHHHhhcEEEeCCCCc---CCCc--eeeEeecCCCceEEEEEccc
Q 012950          384 FLPFSSGPRICVGLNFAATEAKIALSMILQRYRFNLSPSYV---HSPV--LVVTLRPQHGLQVIFQPLSV  448 (452)
Q Consensus       384 ~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~---~~~~--~~~~~~p~~~~~v~~~~r~~  448 (452)
                      ++|||.|+|.|+|++||.+|++++++.|+++|+|+++++..   ....  .+.+..|. ++.|.+++|+.
T Consensus       417 ~~pFg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~R~~  485 (496)
T 3qz1_A          417 ALAFGCGARVCLGESLARLELFVVLARLLQAFTLLPPPVGALPSLQPDPYCGVNLKVQ-PFQVRLQPRGV  485 (496)
T ss_dssp             CCSSCCSSSSCSSHHHHHHHHHHHHHHHHHHCCCCCCTTCCCCCSCCSCCCSSCCCCC-CCCCCCCCC--
T ss_pred             ccCCCCCCCCCccHHHHHHHHHHHHHHHHHhcEEeCCCCCCCCCCCcccCcceEecCC-ceEEEEEEecc
Confidence            99999999999999999999999999999999999875421   1111  24455665 89999999975


No 15 
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=100.00  E-value=1.7e-66  Score=517.13  Aligned_cols=407  Identities=27%  Similarity=0.422  Sum_probs=324.2

Q ss_pred             CceeeeccCcceEEeCCHHHHHHHHhcCCCCCCCCCch--hhHHhhhcCceecc--CCccHHHHHhhhccccchhhhhhh
Q 012950            1 MNFLTWYGSRAQLVITQPELIKEILSNSDGTYPKVQAP--GFLRKILGDGLVTA--GGENWHRQRKLATLAFYAESLRVT   76 (452)
Q Consensus         1 ~~~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~~~~~--~~~~~~~g~~l~~~--~~~~w~~~Rr~~~~~f~~~~l~~~   76 (452)
                      |||++++|+.+.|+|+||+++++|+.++  .|.+....  ..+....+.|+++.  +|+.|+++||++.++|++++++  
T Consensus        38 ~v~~~~~~~~~~v~v~~~~~~~~il~~~--~f~~~~~~~~~~~~~~~~~~l~~~~~~g~~w~~~Rr~~~~~fs~~~l~--  113 (470)
T 2ij2_A           38 EIFKFEAPGRVTRYLSSQRLIKEACDES--RFDKNLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMK--  113 (470)
T ss_dssp             SEEEEEETTEEEEEECCHHHHHHHTCTT--TEEECCCHHHHHHHHHHTTSGGGSCTTSHHHHHHHHHHGGGGSTTTHH--
T ss_pred             CeEEEecCCccEEEECCHHHHHHHHhhc--CcCcCchhHHHHHHHhcCCceEEcCCCchHHHHHHHHhccccCHHHHH--
Confidence            6899999999999999999999999642  46553321  11223346788876  7999999999999999999999  


Q ss_pred             cchhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhc-CCceeehhhhHHHHHHHHHHHhhcCCCccch--hh
Q 012950           77 KSNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHS-EGKEIEVSQEFKLLTSEIISRTAFGSSYLEG--ES  153 (452)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~-~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~--~~  153 (452)
                                              .+.+.+.+.+..+++.|... +++++|+..++..+++|+|+.++||.+++..  ++
T Consensus       114 ------------------------~~~~~i~~~~~~l~~~l~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~  169 (470)
T 2ij2_A          114 ------------------------GYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQ  169 (470)
T ss_dssp             ------------------------HHHHHHHHHHHHHHHHHHTCCTTCCEEHHHHHHHHHHHHHHHHHHSCCCCGGGCSS
T ss_pred             ------------------------HHHHHHHHHHHHHHHHHHhhCCCCeEEHHHHHHHHHHHHHHHHHcCCcccccccCC
Confidence                                    99999999999999999753 3468999999999999999999999987532  11


Q ss_pred             HHHHHHhhHHHHhhhhhhhcc-ccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHhcC
Q 012950          154 IFNKLTNMSFLASRNAYKIKI-PLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKAYH  232 (452)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~  232 (452)
                      .......+...+......... |++ .+++....+...+..+.+.+++.+.++++++..   .   ...|+++.|++...
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~---~---~~~dll~~ll~~~~  242 (470)
T 2ij2_A          170 PHPFITSMVRALDEAMNKLQRANPD-DPAYDENKRQFQEDIKVMNDLVDKIIADRKASG---E---QSDDLLTHMLNGKD  242 (470)
T ss_dssp             CCHHHHHHHHHHHHHHHTC---CTT-SGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---C---CCSSHHHHHHHCCC
T ss_pred             CCHHHHHHHHHHHHHHHHHhhhhhH-hhccchHHHHHHHHHHHHHHHHHHHHHHHHhcc---c---CchhHHHHHHhccC
Confidence            111111111111111111111 223 333333334455667778888888888877541   1   45799999998653


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHHHHHHHHHh
Q 012950          233 DPDMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKTMSMVINES  312 (452)
Q Consensus       233 ~~~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~  312 (452)
                      +. .+..++++++++++..+++||+|||+++++|++++|++||++|++|++||+++++++.++++++++||||+|||+|+
T Consensus       243 ~~-~~~~ls~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~~lpyl~a~i~E~  321 (470)
T 2ij2_A          243 PE-TGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEA  321 (470)
T ss_dssp             TT-TCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCSSSCCHHHHHTCHHHHHHHHHH
T ss_pred             cc-cCCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCHHHHhCCHHHHHHHHHH
Confidence            22 23469999999999999999999999999999999999999999999999999998789999999999999999999


Q ss_pred             hcCCCCCCCccccccceeecCC-eeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcccccCCCC
Q 012950          313 LRLYPPAVNISRNVEREVRLGK-YILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPFSSGP  391 (452)
Q Consensus       313 lRl~p~~~~~~r~~~~d~~l~g-~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~  391 (452)
                      ||++|+++..+|.+.+|++++| |.|||||.|+++.|++||||++||+||++|+|||| ++ ...  ..+..++|||.|+
T Consensus       322 lRl~p~~~~~~r~~~~d~~~~g~~~Ip~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeR~-~~-~~~--~~~~~~~pFG~G~  397 (470)
T 2ij2_A          322 LRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF-EN-PSA--IPQHAFKPFGNGQ  397 (470)
T ss_dssp             HHHSCSSCEEEEEESSCEEETTTEEECTTCEEEEEHHHHTTCHHHHCSCTTSCCGGGG-SS-GGG--SCTTSCCTTCCGG
T ss_pred             HhcCCCccccceeccCCcccCCceEeCCCCEEEechHHhcCCHhhhCCCccccCcccc-CC-CCc--CCCccccCCCCCC
Confidence            9999999988999999999999 99999999999999999999999899999999999 32 111  2456899999999


Q ss_pred             CCCcchHHHHHHHHHHHHHHHhhcEEEeCCCCcCCCceeeEeecCCCceEEEEEccc
Q 012950          392 RICVGLNFAATEAKIALSMILQRYRFNLSPSYVHSPVLVVTLRPQHGLQVIFQPLSV  448 (452)
Q Consensus       392 r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r~~  448 (452)
                      |.|+|++||.+|++++++.|+++|+|+..++.........+..|. +++|.+++|+.
T Consensus       398 r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~p~-~~~v~~~~R~~  453 (470)
T 2ij2_A          398 RACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPE-GFVVKAKSKKI  453 (470)
T ss_dssp             GSCTTHHHHHHHHHHHHHHHHHHEEEECTTCCCCCEEESSSEEET-TCEEEEEECCC
T ss_pred             CcCCcHHHHHHHHHHHHHHHHHHeeEeeCCCCccccccceEecCC-CeEEEEEEccC
Confidence            999999999999999999999999999433322222234567887 99999999974


No 16 
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=100.00  E-value=5.3e-66  Score=515.34  Aligned_cols=415  Identities=17%  Similarity=0.271  Sum_probs=316.0

Q ss_pred             CceeeeccCcceEEeCCHHHHHHHHhcCCCCCCCCCchhhHHhh----hcCceec-cCCccHHHHHhhhccccchhhhhh
Q 012950            1 MNFLTWYGSRAQLVITQPELIKEILSNSDGTYPKVQAPGFLRKI----LGDGLVT-AGGENWHRQRKLATLAFYAESLRV   75 (452)
Q Consensus         1 ~~~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~~~~~~~~~~~----~g~~l~~-~~~~~w~~~Rr~~~~~f~~~~l~~   75 (452)
                      |||++++|+.++|+|+||+++++||.+++..|+.++........    .+.++++ .+|+.|+++|+++.+.|+...+..
T Consensus        45 ~i~~~~~g~~~~vvv~~p~~i~~vl~~~~~~f~~r~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~~~~~~~~  124 (479)
T 3tbg_A           45 DVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQGVFLARYGPAWREQRRFSVSTLRNLGLGK  124 (479)
T ss_dssp             SEEEEEETTEEEEEEEHHHHHHHHHTTTGGGSCBCCCCGGGGGGTCBTTBCCSTTCCSSHHHHHHHHHHHHHHHHTTSTT
T ss_pred             CEEEEEECCeeEEEECCHHHHHHHHHhCChhhcCCCchHHHHHhccCCCCCceeeCCCCHHHHHHHHHHHHHhcchhhhH
Confidence            68999999999999999999999999877677533321222222    2345554 469999999999999998877651


Q ss_pred             hcchhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhHHHHHHHHHHHhhcCCCccchhhHH
Q 012950           76 TKSNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEFKLLTSEIISRTAFGSSYLEGESIF  155 (452)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~~~~~  155 (452)
                                              ..+.+.+......+...+.....+.+|+..++..+++++++.++||..++..+...
T Consensus       125 ------------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~  180 (479)
T 3tbg_A          125 ------------------------KSLEQWVTEEAACLCAAFANHSGRPFRPNGLLDKAVSNVIASLTCGRRFEYDDPRF  180 (479)
T ss_dssp             ------------------------CHHHHHHHHHHHHHHHHHHTTTTCCBCTHHHHHHHHHHHHHHHHHSCCCCTTCHHH
T ss_pred             ------------------------HHHHHHHHHHHHHHHHHHHhccCCcccHHHHHHHHHHHHHHHhhcCCcccccchhh
Confidence                                    03455666666666666665567889999999999999999999999987544432


Q ss_pred             HHHHhhHHHHhhhh------hhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHH
Q 012950          156 NKLTNMSFLASRNA------YKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLK  229 (452)
Q Consensus       156 ~~~~~~~~~~~~~~------~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~  229 (452)
                      ..............      .....|+. .+++ ....+.....+.....+.+.++.+........   ...|+++.++.
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~d~~~~~~~  255 (479)
T 3tbg_A          181 LRLLDLAQEGLKEESGFLREVLNAVPVL-LHIP-ALAGKVLRFQKAFLTQLDELLTEHRMTWDPAQ---PPRDLTEAFLA  255 (479)
T ss_dssp             HHHHHHHHHHHHTTSSHHHHHHHHSGGG-GGSH-HHHHHHTHHHHHHHHHHHHHHHHHHHHCCTTS---CCCSHHHHHHH
T ss_pred             hhhhhhhhhhhhhhhhhhhhhhcccchh-ccch-hhHHHHHHHHHHHHHHHHHHHHHHHHhhhccc---ccchhhhhhhh
Confidence            22222111111100      11112222 2221 11223444555666666666666665543322   45677776664


Q ss_pred             hc--CCCCCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCC-CCCChhhccccHHHH
Q 012950          230 AY--HDPDMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQ-KNPAPDGIGKLKTMS  306 (452)
Q Consensus       230 ~~--~~~~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~-~~~~~~~~~~lp~l~  306 (452)
                      ..  ...+....++++++.+++.++++||+|||+++++|++++|++||++|+|||+||+.+++. +.++.+++++||||+
T Consensus       256 ~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~  335 (479)
T 3tbg_A          256 EMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTT  335 (479)
T ss_dssp             HHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSCCCHHHHTTCHHHH
T ss_pred             hhhhcccCCccchhhHHHHHHHHHHHHhhhhhhHHHHHHHHHHhccCHHHHHHHHHHHHHHHhhccccchhhhccccccc
Confidence            32  222234579999999999999999999999999999999999999999999999999975 789999999999999


Q ss_pred             HHHHHhhcCCCCCCCc-cccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCccc
Q 012950          307 MVINESLRLYPPAVNI-SRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFL  385 (452)
Q Consensus       307 a~i~E~lRl~p~~~~~-~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~  385 (452)
                      |||+||||++|++|.. +|.+.+|++++||.|||||.|+++.|++||||++| +||++|+||||+++++..  ..+.+|+
T Consensus       336 avi~EtlRl~p~~~~~~~~~~~~d~~~~g~~IP~Gt~V~~~~~~~h~d~~~~-~dP~~F~PeRfl~~~~~~--~~~~~~~  412 (479)
T 3tbg_A          336 AVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVW-EKPFRFHPEHFLDAQGHF--VKPEAFL  412 (479)
T ss_dssp             HHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTS-SSTTSCCGGGGBCTTCCB--CCCTTCC
T ss_pred             cceeeeccccccccccceeecCCCceECCEEecCCCeeeechhhhcCChhhC-CCccccCccccCCCCccc--CCCCcee
Confidence            9999999999999986 67888999999999999999999999999999999 999999999999875443  3667899


Q ss_pred             ccCCCCCCCcchHHHHHHHHHHHHHHHhhcEEEeCCCCcCC---CceeeEeecCCCceEEEEEccc
Q 012950          386 PFSSGPRICVGLNFAATEAKIALSMILQRYRFNLSPSYVHS---PVLVVTLRPQHGLQVIFQPLSV  448 (452)
Q Consensus       386 ~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~---~~~~~~~~p~~~~~v~~~~r~~  448 (452)
                      |||+|+|.|+|++||++|+++++|.|+++|+|+++++....   ...+++..|. +++|.++||+.
T Consensus       413 pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~P~-~~~v~~~pRs~  477 (479)
T 3tbg_A          413 PFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPTGQPRPSHHGVFAFLVSPS-PYELCAVPRHH  477 (479)
T ss_dssp             TTCCSTTSCTTHHHHHHHHHHHHHHHHHHEEEECCTTSCCCCSCEEESSSEEEC-CCCBEEEEC--
T ss_pred             cCCCCCcCChhHHHHHHHHHHHHHHHHHccEEEeCCCCCCccccccceeeecCC-CeEEEEEECCC
Confidence            99999999999999999999999999999999998763221   1234566775 89999999985


No 17 
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=100.00  E-value=6.7e-67  Score=520.02  Aligned_cols=403  Identities=23%  Similarity=0.345  Sum_probs=298.8

Q ss_pred             CceeeeccCcceEEeCCHHHHHHHHhcCCCCC-CCCCchhhHHhhhc-CceeccCCccHHHHHhhhccccchhhhhhhcc
Q 012950            1 MNFLTWYGSRAQLVITQPELIKEILSNSDGTY-PKVQAPGFLRKILG-DGLVTAGGENWHRQRKLATLAFYAESLRVTKS   78 (452)
Q Consensus         1 ~~~~~~~g~~~~vvv~~p~~~~~il~~~~~~f-~~~~~~~~~~~~~g-~~l~~~~~~~w~~~Rr~~~~~f~~~~l~~~~~   78 (452)
                      |||++++|+.++++|+||+++++|+.++  .| .++.....+...+| .|+++.+|+.|+++||++.++|++++++    
T Consensus        56 pv~~~~~g~~~~~vv~~~~~i~~il~~~--~~~~~~~~~~~~~~~~g~~~l~~~dg~~h~~~R~~l~~~fs~~~l~----  129 (467)
T 3dbg_A           56 DVVRIKLGPKTVYAVTNPELTGALALNP--DYHIAGPLWESLEGLLGKEGVATANGPLHRRQRRTIQPAFRLDAIP----  129 (467)
T ss_dssp             SEEEEEETTEEEEEECSHHHHHHHHHCT--TC------------------------------CGGGHHHHSTTTST----
T ss_pred             CEEEEEeCCccEEEECCHHHHHHHHhCc--CcccccchHHHHHHhcCCCCcccCCcHHHHHHHHHhhhhhCHHHHH----
Confidence            6899999999999999999999999876  56 56554444555566 7899999999999999999999999999    


Q ss_pred             hhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhHHHHHHHHHHHhhcCCCccchhhHHHHH
Q 012950           79 NCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEFKLLTSEIISRTAFGSSYLEGESIFNKL  158 (452)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~  158 (452)
                                            .+.+.+.++++.+++.|..  ++++|+...+..+++++++.++||.+++..  ....+
T Consensus       130 ----------------------~~~~~i~~~~~~l~~~l~~--~~~~d~~~~~~~~~~~vi~~~~~g~~~~~~--~~~~~  183 (467)
T 3dbg_A          130 ----------------------AYGPIMEEEAHALTERWQP--GKTVDATSESFRVAVRVAARCLLRGQYMDE--RAERL  183 (467)
T ss_dssp             ----------------------TTHHHHHHHHHHHHHHSCT--TSCEEHHHHHHHHHHHHHHHHHSCSSCCHH--HHHHH
T ss_pred             ----------------------HHHHHHHHHHHHHHHHhcc--CCcCcHHHHHHHHHHHHHHHHHhCCcccch--hHHHH
Confidence                                  9999999999999999975  678999999999999999999999988741  11222


Q ss_pred             HhhHHHH-hhhhhhhcccc-ccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHhcCCCCC
Q 012950          159 TNMSFLA-SRNAYKIKIPL-IGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKAYHDPDM  236 (452)
Q Consensus       159 ~~~~~~~-~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~  236 (452)
                      ......+ ........+|+ +..+++....+...+..+.+.+++.+.++++++.   +   ....|+++.|++...++  
T Consensus       184 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~---~---~~~~dll~~ll~~~~~~--  255 (467)
T 3dbg_A          184 CVALATVFRGMYRRMVVPLGPLYRLPLPANRRFNDALADLHLLVDEIIAERRAS---G---QKPDDLLTALLEAKDDN--  255 (467)
T ss_dssp             HHHHHHHHHC------------------------CCHHHHHHHHHHHHHHHTTC---C---SSCCSHHHHHTTC------
T ss_pred             HHHHHHHHHHHHHHhccchhhhhhCCChHhHHHHHHHHHHHHHHHHHHHHHHhc---C---CCchHHHHHHHhhccCC--
Confidence            2211111 11111223332 1144444444556667778888888888776642   1   14579999999865432  


Q ss_pred             CCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHHHHHHHHHhhcCC
Q 012950          237 TKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKTMSMVINESLRLY  316 (452)
Q Consensus       237 ~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~  316 (452)
                      +..+++++++++++.+++||+|||+++++|++++|++||++|++|++|++.+++++.++.+++++||||+|||+|+||++
T Consensus       256 ~~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~~~~~~~~l~~l~yl~a~i~E~lRl~  335 (467)
T 3dbg_A          256 GDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTGGRPVAFEDVRKLRHTGNVIVEAMRLR  335 (467)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTSCCCHHHHTTCHHHHHHHHHHHHHS
T ss_pred             CCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCHHHHhhCHHHHHHHHHHhhcC
Confidence            33699999999999999999999999999999999999999999999999999988899999999999999999999999


Q ss_pred             CCCCCccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcccccCCCCCCCcc
Q 012950          317 PPAVNISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPFSSGPRICVG  396 (452)
Q Consensus       317 p~~~~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G  396 (452)
                      |+++..+|++.+|++++||.||||+.|+++.+++||||++| +||++|+||||+++....  .....++|||.|+|.|+|
T Consensus       336 p~~~~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeRfl~~~~~~--~~~~~~~~FG~G~r~C~G  412 (467)
T 3dbg_A          336 PAVWVLTRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSY-DDNLEFDPDRWLPERAAN--VPKYAMKPFSAGKRKCPS  412 (467)
T ss_dssp             CSCCCEEEECSSCEEETTEEECTTCEEEECHHHHHTCTTTC-TTTTCCCGGGGSHHHHTT--SCTTSCCSSCSSSSSCTT
T ss_pred             CCccccceeeCCCccCCCEEECCCCEEEEChHHhcCCchhc-CCccccCCccCCCCcccc--CCCccccCCCCCCCCCcc
Confidence            99998899999999999999999999999999999999999 999999999999764322  356789999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhhcEEEeCCCCcCCCceeeEeecCCCceEEEEEcc
Q 012950          397 LNFAATEAKIALSMILQRYRFNLSPSYVHSPVLVVTLRPQHGLQVIFQPLS  447 (452)
Q Consensus       397 ~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r~  447 (452)
                      ++||.+|++++++.|+++|+|++.++....+....+++|+ ++++.-.-|.
T Consensus       413 ~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~p~-~l~~~~~~~~  462 (467)
T 3dbg_A          413 DHFSMAQLTLITAALATKYRFEQVAGSNDAVRVGITLRPH-DLLVRPVARH  462 (467)
T ss_dssp             HHHHHHHHHHHHHHHHHHEEEEECTTCEEEEEESSSEEEE-ECEEEEEECC
T ss_pred             HHHHHHHHHHHHHHHHHhceeEeCCCCCCccceeeEecCC-CCccchhhhh
Confidence            9999999999999999999999987755444455677775 6666555443


No 18 
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=100.00  E-value=1.2e-65  Score=516.08  Aligned_cols=404  Identities=19%  Similarity=0.254  Sum_probs=328.5

Q ss_pred             CceeeeccCcceEEeCCHHHHHHHHhcCCCCCCCCCchhhHHh---hhcCcee-ccCCccHHHHHhhhccccchhhhhhh
Q 012950            1 MNFLTWYGSRAQLVITQPELIKEILSNSDGTYPKVQAPGFLRK---ILGDGLV-TAGGENWHRQRKLATLAFYAESLRVT   76 (452)
Q Consensus         1 ~~~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~~~~~~~~~~---~~g~~l~-~~~~~~w~~~Rr~~~~~f~~~~l~~~   76 (452)
                      +||++++|+.++|+++||+++++++.++  .|+.++.......   ..|.|++ ..+|+.|+++||+++++|+..+++  
T Consensus        83 ~v~~~~~g~~~~vvv~~p~~~~~il~~~--~~~~r~~~~~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~~~f~~~~l~--  158 (503)
T 3s79_A           83 EFMRVWISGEETLIISKSSSMFHIMKHN--HYSSRFGSKLGLQCIGMHEKGIIFNNNPELWKTTRPFFMKALSGPGLV--  158 (503)
T ss_dssp             SEEEEESSSSEEEEECCHHHHHHHHHSG--GGCCCCCCHHHHHHHTCTTSSSTTCCCHHHHHHHHHHHHHHTSTHHHH--
T ss_pred             CeEEEEeCCccEEEECCHHHHHHHHhcC--CCCCcchhhhhhhhhccCCCceeeCCCccHHHHHHHhhhHhhChHHHH--
Confidence            6899999999999999999999999753  4644332122222   2346655 456899999999999999999998  


Q ss_pred             cchhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhc--CCceeehhhhHHHHHHHHHHHhhcCCCccchhhH
Q 012950           77 KSNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHS--EGKEIEVSQEFKLLTSEIISRTAFGSSYLEGESI  154 (452)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~--~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~~~~  154 (452)
                                              .+.+.+.+++..+++.+...  .++++|+.+++..+++++++.++||.++++. +.
T Consensus       159 ------------------------~~~~~~~~~~~~~l~~l~~~~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~~~-~~  213 (503)
T 3s79_A          159 ------------------------RMVTVCAESLKTHLDRLEEVTNESGYVDVLTLLRRVMLDTSNTLFLRIPLDES-AI  213 (503)
T ss_dssp             ------------------------HHHHHHHHHHHHHHTTGGGTBCTTSCBCHHHHHHHHHHHHHHHHHTCCCCCHH-HH
T ss_pred             ------------------------HHHHHHHHHHHHHHHHHHHHhcCCCeEcHHHHHHHHHHHHHHHHHcCcccCch-hH
Confidence                                    89999999999999988653  4578999999999999999999999988632 33


Q ss_pred             HHHHHhhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHhcCCC
Q 012950          155 FNKLTNMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKAYHDP  234 (452)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~  234 (452)
                      ...+...........   ..|.+...++ +..++..+..+.+.+++.+.++++++....+.......|+++.|++...+ 
T Consensus       214 ~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~-  288 (503)
T 3s79_A          214 VVKIQGYFDAWQALL---IKPDIFFKIS-WLYKKYEKSVKDLKDAIEVLIAEKRRRISTEEKLEECMDFATELILAEKR-  288 (503)
T ss_dssp             HHHHHHHHHHHHHHT---TCCHHHHHSG-GGTHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTTTTTCCHHHHHHHHHHT-
T ss_pred             HHHHHHHHHHHHHHh---cCcHHHhhcc-hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchHHHHHHHHHHhccc-
Confidence            333333332222111   1111101112 12345667788899999999999887766543322446999999987533 


Q ss_pred             CCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHHHHHHHHHhhc
Q 012950          235 DMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKTMSMVINESLR  314 (452)
Q Consensus       235 ~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lR  314 (452)
                         .+++++++++++..+++||+|||+++++|++++|++||++|+|+++||++++|++.++.+++++||||+|||+|+||
T Consensus       289 ---~~l~~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~~~~~~~~~lpyl~avi~E~lR  365 (503)
T 3s79_A          289 ---GDLTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGERDIKIDDIQKLKVMENFIYESMR  365 (503)
T ss_dssp             ---TSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTTTSCCCHHHHTTCHHHHHHHHHHHH
T ss_pred             ---CCCCHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCHHHHhcCHHHHHHHHhhhc
Confidence               36899999999999999999999999999999999999999999999999999888999999999999999999999


Q ss_pred             CCCCCCCccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcccccCCCCCCC
Q 012950          315 LYPPAVNISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPFSSGPRIC  394 (452)
Q Consensus       315 l~p~~~~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C  394 (452)
                      ++|++|..+|.+.+|++++||.|||||.|+++.|++||| ++| +||++|+||||+++      .....|+|||+|+|.|
T Consensus       366 l~p~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d-~~~-~dp~~F~PeRf~~~------~~~~~~~pFg~G~r~C  437 (503)
T 3s79_A          366 YQPVVDLVMRKALEDDVIDGYPVKKGTNIILNIGRMHRL-EFF-PKPNEFTLENFAKN------VPYRYFQPFGFGPRGC  437 (503)
T ss_dssp             HSCSSCCEEEECSSCEEETTEEECTTCEEEECHHHHTTT-SSC-SSTTSCCGGGGSSC------CCTTTCCSSCCSTTSC
T ss_pred             cCCCcccccccccCCeeECCEEECCCCEEEeehHHhCCC-ccC-CChhhCChhhcCCC------CCcccccCCCCCCCCC
Confidence            999999888999999999999999999999999999998 999 99999999999965      2455799999999999


Q ss_pred             cchHHHHHHHHHHHHHHHhhcEEEeCCCCcC---CCceeeEeecCCC---ceEEEEEcccc
Q 012950          395 VGLNFAATEAKIALSMILQRYRFNLSPSYVH---SPVLVVTLRPQHG---LQVIFQPLSVN  449 (452)
Q Consensus       395 ~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~---~~~~~~~~~p~~~---~~v~~~~r~~~  449 (452)
                      +|++||.+|++++++.++++|+|+++++...   ....+.+..|..+   ++|++++|+.+
T Consensus       438 ~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~v~~~~R~~~  498 (503)
T 3s79_A          438 AGKYIAMVMMKAILVTLLRRFHVKTLQGQCVESIQKIHDLSLHPDETKNMLEMIFTPRNSD  498 (503)
T ss_dssp             TTHHHHHHHHHHHHHHHHTTEEEEESTTCCTTTSCEEESSSEEECTTSCCCCEEEEECC--
T ss_pred             CcHHHHHHHHHHHHHHHHHheEEEeCCCCCccccccccceeecCCCccceeeEEeccCCch
Confidence            9999999999999999999999999876322   2234566788765   99999999854


No 19 
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=100.00  E-value=4.1e-66  Score=512.05  Aligned_cols=403  Identities=18%  Similarity=0.308  Sum_probs=334.8

Q ss_pred             CceeeeccCcceEEeCCHHHHHHHHhcCCCCCCCCCchhhHHhhhcCceec-cCCccHHHHHhhhccccchhhhhhhcch
Q 012950            1 MNFLTWYGSRAQLVITQPELIKEILSNSDGTYPKVQAPGFLRKILGDGLVT-AGGENWHRQRKLATLAFYAESLRVTKSN   79 (452)
Q Consensus         1 ~~~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~~~~~~~~~~~~g~~l~~-~~~~~w~~~Rr~~~~~f~~~~l~~~~~~   79 (452)
                      +||++++|+.++||++||+++++++.+++..|+++.....+...+|.|+++ .+++.|+++||++.++|++++++     
T Consensus        39 ~i~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~R~~~~~~f~~~~l~-----  113 (450)
T 3gw9_A           39 GIFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREVYSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQ-----  113 (450)
T ss_dssp             SEEEEEETTEEEEEECCGGGTHHHHSSCTTTEESTGGGGGGHHHHCTTSGGGSCHHHHHHHHHHHHHTTSGGGCT-----
T ss_pred             CeEEEEECCEeEEEEeCHHHHHHHHhCChhhccchhhHHHHHHHhcCCcccCCCcHHHHHHHHHHHHHHhHHHHH-----
Confidence            589999999999999999999999998776787666555566677888765 47999999999999999999999     


Q ss_pred             hhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHH-HhhhcCCceeehhhhHHHHHHHHHHHhhcCCCccchhhHHHHH
Q 012950           80 CLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLK-RWRHSEGKEIEVSQEFKLLTSEIISRTAFGSSYLEGESIFNKL  158 (452)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~-~~~~~~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~  158 (452)
                                           .+.+.+.+++..+++ .|.+ .++++|+.+++..+++++++.++||.+++...+ ...+
T Consensus       114 ---------------------~~~~~i~~~~~~ll~~~~~~-~~~~vd~~~~~~~~~~~~i~~~~fG~~~~~~~~-~~~~  170 (450)
T 3gw9_A          114 ---------------------NFVPAIQHEVRKFMAANWDK-DEGEINLLEDCSTMIINTACQCLFGEDLRKRLD-ARRF  170 (450)
T ss_dssp             ---------------------THHHHHHHHHHHHHHHHSCS-SEEEEEHHHHHHHHHHHHHHHHHSCHHHHHHSC-HHHH
T ss_pred             ---------------------HHHHHHHHHHHHHHHHHhcc-CCCcccHHHHHHHHHHHHHHHHHcCcchhhhhh-hHHH
Confidence                                 999999999999999 7753 357899999999999999999999988754222 1112


Q ss_pred             HhhHHHHhhh--hhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHhcCCCCC
Q 012950          159 TNMSFLASRN--AYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKAYHDPDM  236 (452)
Q Consensus       159 ~~~~~~~~~~--~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~  236 (452)
                      ......+...  .....+|++ .++|....++..++.+.+.+++.+.++++++.......  ...|+++.|++...++  
T Consensus       171 ~~~~~~~~~~~~~~~~~~P~l-~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~--~~~d~l~~ll~~~~~~--  245 (450)
T 3gw9_A          171 AQLLAKMESSLIPAAVFLPIL-LKLPLPQSARCHEARTELQKILSEIIIARKEEEVNKDS--STSDLLSGLLSAVYRD--  245 (450)
T ss_dssp             HHHHHHHHHTCCGGGGTCGGG-GGSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSC--CCCSHHHHHHHCBCTT--
T ss_pred             HHHHHHHHhccccchhcccch-hccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCC--ccchHHHHHHHhhccC--
Confidence            1111111111  123456766 66666555666778888999999999888765432222  5689999999876443  


Q ss_pred             CCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHh--cCcHHHHHHHHHHHHHhCCCCCChhhc-cccHHHHHHHHHhh
Q 012950          237 TKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLA--THTDWQEKLREEVLELFGQKNPAPDGI-GKLKTMSMVINESL  313 (452)
Q Consensus       237 ~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~--~~p~~~~~l~~Ei~~~~~~~~~~~~~~-~~lp~l~a~i~E~l  313 (452)
                      +..+++++++++++.+++||+|||+++++|++++|+  +||++|+++++|++++  .+.++.+++ ++||||+|||+|+|
T Consensus       246 ~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~~~p~~~~~l~~Ei~~~--~~~~~~~~~~~~lpyl~a~i~E~l  323 (450)
T 3gw9_A          246 GTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEF--PAQLNYNNVMDEMPFAERCARESI  323 (450)
T ss_dssp             SCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGHHHHHHHHHHHTTC--CSSCCHHHHHHHCHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHcCCcchhHHHHHHHHHHhc--cCCCChHHHHHhcHHHHHHHHHHH
Confidence            346999999999999999999999999999999999  9999999999999988  566889999 99999999999999


Q ss_pred             cCCCCCCCccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcccccCCCCCC
Q 012950          314 RLYPPAVNISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPFSSGPRI  393 (452)
Q Consensus       314 Rl~p~~~~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~  393 (452)
                      |++|+++..+|.+.+|++++||.|||||.|+++.+++||||++| +||++|+|||+.        ..+..++|||.|+|.
T Consensus       324 Rl~p~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~-~dp~~F~PeR~~--------~~~~~~~~Fg~G~r~  394 (450)
T 3gw9_A          324 RRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAF-PEPRRWDPERDE--------KVEGAFIGFGAGVHK  394 (450)
T ss_dssp             HHSCSCCCEEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCCC--------SSTTCCCTTCCGGGC
T ss_pred             HhCCchhccccccccccccCCEEECCCCEEEEChHHhhCChhhc-CCccccCCCcCc--------CCCCceeCCCCCCCC
Confidence            99999998899999999999999999999999999999999999 999999999931        235689999999999


Q ss_pred             CcchHHHHHHHHHHHHHHHhhcEEEeCCCCcCCC-ceeeEeecC-CCceEEEEEcc
Q 012950          394 CVGLNFAATEAKIALSMILQRYRFNLSPSYVHSP-VLVVTLRPQ-HGLQVIFQPLS  447 (452)
Q Consensus       394 C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~-~~~~~~~p~-~~~~v~~~~r~  447 (452)
                      |+|++||.+|++++++.|+++|+|+++++....+ ....+..|. .++.|++++|+
T Consensus       395 C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~R~  450 (450)
T 3gw9_A          395 CIGQKFGLLQVKTILATAFRSYDFQLLRDEVPDPDYHTMVVGPTASQCRVKYIRRK  450 (450)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHEEEEESSSSCCCEETTSSSCEECGGGCEEEEEECC
T ss_pred             CccHHHHHHHHHHHHHHHHHHceEEecCCCCCCCccccceecCCCCceEeEeeecC
Confidence            9999999999999999999999999985422211 123556787 79999999985


No 20 
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=100.00  E-value=2.1e-66  Score=520.09  Aligned_cols=422  Identities=18%  Similarity=0.285  Sum_probs=325.9

Q ss_pred             CceeeeccCcceEEeCCHHHHHHHHhcCCCCCCCCCchhhHHhh-hcCceecc--CCccHHHHHhhhccccchhhhhhhc
Q 012950            1 MNFLTWYGSRAQLVITQPELIKEILSNSDGTYPKVQAPGFLRKI-LGDGLVTA--GGENWHRQRKLATLAFYAESLRVTK   77 (452)
Q Consensus         1 ~~~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~~~~~~~~~~~-~g~~l~~~--~~~~w~~~Rr~~~~~f~~~~l~~~~   77 (452)
                      |||++++|+.++++++||+++++|+.+++..|++++........ .+.|+++.  +|+.|+++||+++++|+..+.....
T Consensus        50 ~v~~~~~g~~~~vvv~~~~~i~~il~~~~~~f~~r~~~~~~~~~~~~~~l~~~~~~g~~w~~~Rr~~~~~f~~~s~~~~~  129 (495)
T 2hi4_A           50 DVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYTSTLITDGQSLTFSTDSGPVWAARRRLAQNALNTFSIASDP  129 (495)
T ss_dssp             SEEEEEETTEEEEEECSHHHHHHHHTTTGGGSCBCCCCHHHHTSTTSCCTTTSSCCSHHHHHHHHHHHHHHHHTTTSBCS
T ss_pred             CEEEEEECCccEEEECCHHHHHHHHHhcchhhCCCCCcHHHHHhcCCCCEEEcCCCChHHHHHHHHHHHHHHHhccCccc
Confidence            58899999999999999999999998766578644322223322 35677777  6999999999999987654332000


Q ss_pred             chhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhh--cCCceeehhhhHHHHHHHHHHHhhcCCCccchhhHH
Q 012950           78 SNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRH--SEGKEIEVSQEFKLLTSEIISRTAFGSSYLEGESIF  155 (452)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~--~~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~~~~~  155 (452)
                                       .......+.+.+.++++.+++.|..  .+++++|+..++..+++|+|+.++||.+++..++..
T Consensus       130 -----------------~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~d~~~~~~~~~~dvi~~~~fG~~~~~~~~~~  192 (495)
T 2hi4_A          130 -----------------ASSSSCYLEEHVSKEAKALISRLQELMAGPGHFDPYNQVVVSVANVIGAMCFGQHFPESSDEM  192 (495)
T ss_dssp             -----------------SCSSCBHHHHHHHHHHHHHHHHHHHHHHTTSCBCHHHHHHHHHHHHHHHHHHGGGSCTTCHHH
T ss_pred             -----------------ccchhhhHHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHHHHHHcCCCCCCCCHHH
Confidence                             0000004788999999999999976  346789999999999999999999999876433322


Q ss_pred             HHHHhh-HHHHh---hhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHhc
Q 012950          156 NKLTNM-SFLAS---RNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKAY  231 (452)
Q Consensus       156 ~~~~~~-~~~~~---~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~  231 (452)
                      ..+... .....   .......+|++ .++|....++..+..+.+.+++.+.|+++++....+    ...|+++.|++..
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~p~l-~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~----~~~d~l~~ll~~~  267 (495)
T 2hi4_A          193 LSLVKNTHEFVETASSGNPLDFFPIL-RYLPNPALQRFKAFNQRFLWFLQKTVQEHYQDFDKN----SVRDITGALFKHS  267 (495)
T ss_dssp             HHHHTTTHHHHTTSSTTCGGGTCGGG-GGSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTT----CCCSHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcccchHHHHhHHH-HhcCchHHHHHHHHHHHHHHHHHHHHHHHHHhhccc----ccccHHHHHHHHh
Confidence            222221 11111   11123446766 566644455566777788889999998887642211    4579999999653


Q ss_pred             CC--CCCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCC-CCCChhhccccHHHHHH
Q 012950          232 HD--PDMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQ-KNPAPDGIGKLKTMSMV  308 (452)
Q Consensus       232 ~~--~~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~-~~~~~~~~~~lp~l~a~  308 (452)
                      .+  .+.+..++++++++++..+++||+|||+++++|++++|++||++|++|++||+++++. +.++.+++++||||+||
T Consensus       268 ~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~av  347 (495)
T 2hi4_A          268 KKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLSDRPQLPYLEAF  347 (495)
T ss_dssp             HHCCEETTEECCTHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTTTSSCCCGGGSTTCHHHHHH
T ss_pred             hhccCccccCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHhcCCCCCCChHHhccCHHHHHH
Confidence            21  1112468999999999999999999999999999999999999999999999999985 56899999999999999


Q ss_pred             HHHhhcCCCCCCC-ccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCC-CCCCCcccc
Q 012950          309 INESLRLYPPAVN-ISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKAS-NNTPAAFLP  386 (452)
Q Consensus       309 i~E~lRl~p~~~~-~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~-~~~~~~~~~  386 (452)
                      |+|+||++|++|. .+|++.+|++++||.|||||.|.++.|++||||++| +||++|+||||+++++... ...+..++|
T Consensus       348 i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeRfl~~~~~~~~~~~~~~~~p  426 (495)
T 2hi4_A          348 ILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELW-EDPSEFRPERFLTADGTAINKPLSEKMML  426 (495)
T ss_dssp             HHHHHHHHCSSCBCSCEECSSCEEETTEEECTTCEEEEBHHHHHHCTTTC-SSTTSCCGGGGBCTTSSSBCHHHHTTCCC
T ss_pred             HHHHHHccCCccCCCccccCCCeeEeCeEECCCCEEEeChHHhhCCcccC-CCcCccCcccccCCCCcccccCCCCceeC
Confidence            9999999999996 699999999999999999999999999999999999 9999999999997533210 013457999


Q ss_pred             cCCCCCCCcchHHHHHHHHHHHHHHHhhcEEEeCCCCcC--CCceeeEeecCCCc-eEEEEEcc
Q 012950          387 FSSGPRICVGLNFAATEAKIALSMILQRYRFNLSPSYVH--SPVLVVTLRPQHGL-QVIFQPLS  447 (452)
Q Consensus       387 Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~--~~~~~~~~~p~~~~-~v~~~~r~  447 (452)
                      ||.|+|.|+|++||++|++++++.|+++|+|++.++...  ....+.+..|. ++ +|.++ |.
T Consensus       427 FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~p~-~~~~v~~~-R~  488 (495)
T 2hi4_A          427 FGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVKVDLTPIYGLTMKHA-RCEHVQAR-RF  488 (495)
T ss_dssp             SCCGGGCCTTHHHHHHHHHHHHHHHHHHCEEECCTTCCCCCCCBCSSSCBCC-CCCCBEEE-CC
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEeCCCCCCCCccccCCceecCC-CcceEEEE-Ec
Confidence            999999999999999999999999999999998765322  22234556776 45 88888 75


No 21 
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=100.00  E-value=2.4e-66  Score=514.07  Aligned_cols=405  Identities=18%  Similarity=0.278  Sum_probs=304.4

Q ss_pred             CceeeeccCcceEEeCCHHHHHHHHhcCCCCCCCCCchhhHHhhhcCceeccCCccHHHHHhhhccccchhhhhhhcchh
Q 012950            1 MNFLTWYGSRAQLVITQPELIKEILSNSDGTYPKVQAPGFLRKILGDGLVTAGGENWHRQRKLATLAFYAESLRVTKSNC   80 (452)
Q Consensus         1 ~~~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~~~~~~~~~~~~g~~l~~~~~~~w~~~Rr~~~~~f~~~~l~~~~~~~   80 (452)
                      +||.+++|+.++++++||+++++|+.+++..|+++.........+|.+++ .+++.|+++|+++.++|++++++      
T Consensus        39 ~v~~~~~~~~~~~vv~~~~~~~~il~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~R~~~~~~f~~~~l~------  111 (455)
T 2cib_A           39 DVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPFMTPIFGEGVV-FDASPERRKEMLHNAALRGEQMK------  111 (455)
T ss_dssp             SEEEEEETTEEEEEECSHHHHHHHHHCCTTTEECTTSCGGGHHHHC---------------------CCHHHHH------
T ss_pred             CEEEEEeCCceEEEECCHHHHHHHHhcCccccCcccchhHHHhhcCCccc-cCcHHHHHHHhhhccccCHHHHH------
Confidence            57899999999999999999999998765567655433334445566654 57999999999999999999999      


Q ss_pred             hhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhHHHHHHHHHHHhhcCCCccch--hhHHHHH
Q 012950           81 LMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEFKLLTSEIISRTAFGSSYLEG--ESIFNKL  158 (452)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~--~~~~~~~  158 (452)
                                          .+.+.+.++++.+++.|..  ++++|+..++..+++++++.++||.+++..  .++...+
T Consensus       112 --------------------~~~~~i~~~~~~l~~~~~~--~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~  169 (455)
T 2cib_A          112 --------------------GHAATIEDQVRRMIADWGE--AGEIDLLDFFAELTIYTSSACLIGKKFRDQLDGRFAKLY  169 (455)
T ss_dssp             --------------------HHHHHHHHHHHHHHTTCCS--EEEEEHHHHHHHHHHHHHHHHHTCHHHHTTCCHHHHHHH
T ss_pred             --------------------HHHHHHHHHHHHHHHHhCC--CCcEeHHHHHHHHHHHHHHHHHcCCCcchhhhHHHHHHH
Confidence                                9999999999999998865  468999999999999999999999987532  2222222


Q ss_pred             HhhHHHHhhhh--hhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHhcCCCCC
Q 012950          159 TNMSFLASRNA--YKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKAYHDPDM  236 (452)
Q Consensus       159 ~~~~~~~~~~~--~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~  236 (452)
                      ..+    ....  ....+|    |++....++..++.+.+.+++.+.++++++.....   ....|+++.|++...++  
T Consensus       170 ~~~----~~~~~~~~~~~p----~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~---~~~~dll~~ll~~~~~~--  236 (455)
T 2cib_A          170 HEL----ERGTDPLAYVDP----YLPIESFRRRDEARNGLVALVADIMNGRIANPPTD---KSDRDMLDVLIAVKAET--  236 (455)
T ss_dssp             HHH----HTTCCGGGGTCT----TCSCHHHHHHHHHHHHHHHHHHHHHHHHHHCC--------CCCHHHHHHHCBCTT--
T ss_pred             HHH----HhhhhHHHHhcc----cCCChhHHHHHHHHHHHHHHHHHHHHHHHhcccCC---CCcccHHHHHHHhhhhc--
Confidence            211    1110  111223    33332334455667778888888888876532211   02349999999875432  


Q ss_pred             CCC-CCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCC-CCCChhhccccHHHHHHHHHhhc
Q 012950          237 TKR-ISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQ-KNPAPDGIGKLKTMSMVINESLR  314 (452)
Q Consensus       237 ~~~-l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~-~~~~~~~~~~lp~l~a~i~E~lR  314 (452)
                      +.. +++++++++++.+++||+|||+++++|++++|++||++|++|++||++++++ ..++.+++.+||||+|||+|+||
T Consensus       237 ~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~lR  316 (455)
T 2cib_A          237 GTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLR  316 (455)
T ss_dssp             SSBSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHGGGCCCHHHHTTSCCHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHHhcCHHHHHHHHHHHh
Confidence            234 8999999999999999999999999999999999999999999999999986 57889999999999999999999


Q ss_pred             CCCCCCCccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcccccCCCCCCC
Q 012950          315 LYPPAVNISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPFSSGPRIC  394 (452)
Q Consensus       315 l~p~~~~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C  394 (452)
                      ++|+++..+|.+.+|++++||.||||+.|+++.+++||||++| +||++|+||||+++..... ..+..++|||.|+|.|
T Consensus       317 l~p~~~~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~l~~~~~~~-~~~~~~lpFG~G~r~C  394 (455)
T 2cib_A          317 LHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDF-PDPHDFVPARYEQPRQEDL-LNRWTWIPFGAGRHRC  394 (455)
T ss_dssp             HSCSCCCEEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCGGGGSTTTCHHH-HCTTTCCTTCCGGGCC
T ss_pred             cCCcccccceeeCCCceECCEEECCCCEEEEChHHhcCCcccC-CCccccCcccCCCCCcccc-cCCccccCCCCCCCCC
Confidence            9999988899999999999999999999999999999999999 9999999999996532111 1356799999999999


Q ss_pred             cchHHHHHHHHHHHHHHHhhcEEEeCCCCcCCC--ceeeEeecCCCceEEEEEcccc
Q 012950          395 VGLNFAATEAKIALSMILQRYRFNLSPSYVHSP--VLVVTLRPQHGLQVIFQPLSVN  449 (452)
Q Consensus       395 ~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~--~~~~~~~p~~~~~v~~~~r~~~  449 (452)
                      +|++||.+|++++++.|+++|+|++........  ....+..|..+++|++++|...
T Consensus       395 ~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~R~~~  451 (455)
T 2cib_A          395 VGAAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMVVQLAQPAAVRYRRRTGV  451 (455)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHEEEEESSCGGGCCEECSSSSCEECSCCEEEEEEC---
T ss_pred             CcHHHHHHHHHHHHHHHHHheEEEeCCCccccccccccccccCCCCceEEEEECccc
Confidence            999999999999999999999999863211110  0234567777999999999743


No 22 
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=100.00  E-value=5.8e-64  Score=498.18  Aligned_cols=398  Identities=17%  Similarity=0.256  Sum_probs=322.6

Q ss_pred             CceeeeccCcceEEeCCHHHHHHHHhcCCCCCCCCCch-hhHHhhhcCceecc-CCccHHHHHhhhccccchhhhhhhcc
Q 012950            1 MNFLTWYGSRAQLVITQPELIKEILSNSDGTYPKVQAP-GFLRKILGDGLVTA-GGENWHRQRKLATLAFYAESLRVTKS   78 (452)
Q Consensus         1 ~~~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~~~~~-~~~~~~~g~~l~~~-~~~~w~~~Rr~~~~~f~~~~l~~~~~   78 (452)
                      +||++++|+.+.|+|++|+++++++.++...|.++..+ ......+|.|+++. +++.|+++||++.+.|+...++    
T Consensus        46 ~v~~l~l~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~g~~w~~~Rr~~~~~f~~~~l~----  121 (461)
T 3i3k_A           46 PVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTTPVFGKGVAYDVPNPVFLEQKKMLKSGLNIAHFK----  121 (461)
T ss_dssp             SEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHHHHHHHCTTSGGGSCHHHHHHHHHHHHHHSSHHHHH----
T ss_pred             CEEEEEecCceEEEEeChHHHHHHHhccccccccchHHHHhhhhhcCCeeeeCCCcHHHHHHHHHHhhhhCHHHHH----
Confidence            68999999999999999999999998876566654432 23445578887765 6899999999999999999999    


Q ss_pred             hhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhHHHHHHHHHHHhhcCCCccch--hhHHH
Q 012950           79 NCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEFKLLTSEIISRTAFGSSYLEG--ESIFN  156 (452)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~--~~~~~  156 (452)
                                            .+.+.+.+++..+++.|..  .+.+|+.+.+..+++++++..+||.++...  +....
T Consensus       122 ----------------------~~~~~~~~~~~~ll~~l~~--~~~~dl~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~  177 (461)
T 3i3k_A          122 ----------------------QHVSIIEKETKEYFESWGE--SGEKNVFEALSELIILTASHCLHGKEIRSQLNEKVAQ  177 (461)
T ss_dssp             ----------------------HHHHHHHHHHHHHGGGGCS--EEEEEHHHHHHHHHHHHHHHHHTCHHHHHTCCHHHHH
T ss_pred             ----------------------HHHHHHHHHHHHHHHHhhh--cCCcCHHHHHHHHHHHHHHHHHccHhhhhHHHHHHHH
Confidence                                  9999999999999999875  467899999999999999999999876432  11111


Q ss_pred             HHHhhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHhcCCCCC
Q 012950          157 KLTNMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKAYHDPDM  236 (452)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~  236 (452)
                      .+..+....  ......+|   .|++....++..+..+.+.+++.+.++++++..      ....|+++.|++...++  
T Consensus       178 ~~~~~~~~~--~~~~~~~P---~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~------~~~~d~l~~ll~~~~~~--  244 (461)
T 3i3k_A          178 LYADLDGGF--SHAAWLLP---GWLPLPSFRRRDRAHREIKDIFYKAIQKRRQSQ------EKIDDILQTLLDATYKD--  244 (461)
T ss_dssp             HHHHHHTTS--SHHHHHSC---TTSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCC------CCCCSHHHHHHTCBCTT--
T ss_pred             HHHHHHhcc--ccchhhcc---cccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc------cccccHHHHHHHhhhcc--
Confidence            111111000  00112234   344544455666777788888888887765321      15689999999876543  


Q ss_pred             CCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCC--CCChhhccccHHHHHHHHHhhc
Q 012950          237 TKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQK--NPAPDGIGKLKTMSMVINESLR  314 (452)
Q Consensus       237 ~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~--~~~~~~~~~lp~l~a~i~E~lR  314 (452)
                      +..+++++++++++.+++||+|||+++++|++++|++||++|+++++||+++++..  .++.+++++||||+|||+|+||
T Consensus       245 ~~~l~~~~i~~~~~~l~~ag~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~~l~~l~a~i~E~lR  324 (461)
T 3i3k_A          245 GRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCIKETLR  324 (461)
T ss_dssp             SCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCTTCCCCCHHHHHTCHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHhhccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCCCCCCCHHHHhcChHHHHHHHHHHh
Confidence            34699999999999999999999999999999999999999999999999999964  4689999999999999999999


Q ss_pred             CCCCCCCccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcccccCCCCCCC
Q 012950          315 LYPPAVNISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPFSSGPRIC  394 (452)
Q Consensus       315 l~p~~~~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C  394 (452)
                      ++|+++.++|.+.+|++++||.||||+.|+++.+++||||++| +||++|+||||+++....  ..+..|+|||+|+|.|
T Consensus       325 l~p~~~~~~r~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~P~Rfl~~~~~~--~~~~~~~~Fg~G~r~C  401 (461)
T 3i3k_A          325 LRPPIMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSW-VERLDFNPDRYLQDNPAS--GEKFAYVPFGAGRHRC  401 (461)
T ss_dssp             HSCSCCCEEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTC-TTTTCCCGGGGGSCCHHH--HSSSSSCTTCCGGGCC
T ss_pred             cCCCccccccccCCCccCCCEEECCCCEEEEChHHhcCCcccC-CCcccCCCCCCCCCCCCC--CCCcceeCCCCCCCCC
Confidence            9999988899999999999999999999999999999999999 999999999999764321  2456899999999999


Q ss_pred             cchHHHHHHHHHHHHHHHhhcEEEeCCCCcCCC-ceeeEeecCCCceEE
Q 012950          395 VGLNFAATEAKIALSMILQRYRFNLSPSYVHSP-VLVVTLRPQHGLQVI  442 (452)
Q Consensus       395 ~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~-~~~~~~~p~~~~~v~  442 (452)
                      +|++||.+|++++++.|+++|+|+++++..... ....+..|..++.+.
T Consensus       402 ~G~~~A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~p~~~~~~~  450 (461)
T 3i3k_A          402 IGENFAYVQIKTIWSTMLRLYEFDLIDGYFPTVNYTTMIHTPENPVIRY  450 (461)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHEEEECSTTCCCCBCCSSSSCCBSSCEEEE
T ss_pred             cCHHHHHHHHHHHHHHHHHhCeEEeCCCCCCCcccceeecCCCCceEEe
Confidence            999999999999999999999999987643222 223456777655554


No 23 
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=100.00  E-value=3.8e-61  Score=481.76  Aligned_cols=404  Identities=16%  Similarity=0.162  Sum_probs=300.7

Q ss_pred             CceeeeccCcceEEeCCHHHHHHHHhcCCCCCCCCC-chhhHHhhhcCcee-ccCCccHHHHHhhhccccchhhhhhhcc
Q 012950            1 MNFLTWYGSRAQLVITQPELIKEILSNSDGTYPKVQ-APGFLRKILGDGLV-TAGGENWHRQRKLATLAFYAESLRVTKS   78 (452)
Q Consensus         1 ~~~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~~~-~~~~~~~~~g~~l~-~~~~~~w~~~Rr~~~~~f~~~~l~~~~~   78 (452)
                      +||++++|+.++|||+||+++++|+.++. .++... ....+...+|.+++ ..+++.|+++|+.+.+.|+.++++    
T Consensus        48 ~i~~~~~g~~~~vvv~dp~~~~~il~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~r~~~~~~f~~~~l~----  122 (491)
T 3dax_A           48 HVFTCKLMGKYVHFITNPLSYHKVLCHGK-YFDWKKFHFATSAKAFGHRSIDPMDGNTTENINDTFIKTLQGHALN----  122 (491)
T ss_dssp             SEEEEEETTEEEEEECCGGGTHHHHSCCT-TEESSHHHHHHHHHHHTCCCCCGGGTSBCCCHHHHHHHHHSHHHHH----
T ss_pred             CeEEEEECCeEEEEEcChHHHHHHHcCCc-cCChHHHHHHHHHHHcCCCcccccchhHHHHHHHHHHHhcCcccHH----
Confidence            58999999999999999999999998654 232222 22334445677766 678999999999999999998888    


Q ss_pred             hhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhh-----cCCceeehhhhHHHHHHHHHHHhhcCCCccchhh
Q 012950           79 NCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRH-----SEGKEIEVSQEFKLLTSEIISRTAFGSSYLEGES  153 (452)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~-----~~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~~~  153 (452)
                                            .+.+.+.+++..++.....     ..+..+++...+..+++++++...||.++...++
T Consensus       123 ----------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~fG~~~~~~~~  180 (491)
T 3dax_A          123 ----------------------SLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMFEAGYLTIFGRDLTRRDT  180 (491)
T ss_dssp             ----------------------HHHHHHHHHHHHHHC----------CCEEEEHHHHHHHHHHHHHHHHHHCBCSTTGGG
T ss_pred             ----------------------HHHHHHHHHHHHHHHhhccCCcCCCCceeccHHHHHHHHHHHHhHHHHcCcccccccc
Confidence                                  7878887777777655432     1245688999999999999999999988764433


Q ss_pred             HHHHHHhhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHhcCC
Q 012950          154 IFNKLTNMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKAYHD  233 (452)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~  233 (452)
                      ....+..+...+..  ....+|++..++|....+...+..+.+.+.+   ++++..   ...   ...|+++.+++...+
T Consensus       181 ~~~~~~~~~~~~~~--~~~~~p~l~~~lp~~~~~~~~~~~~~~~~~~---~~~~~~---~~~---~~~d~l~~ll~~~~~  249 (491)
T 3dax_A          181 QKAHILNNLDNFKQ--FDKVFPALVAGLPIHMFRTAHNAREKLAESL---RHENLQ---KRE---SISELISLRMFLNDT  249 (491)
T ss_dssp             HHHHHHHHHHHHHH--HHHHHHHHHTTCCGGGSHHHHHHHHHHHHHT---SHHHHT---TCB---SCCHHHHHHHHHHHH
T ss_pred             hhhhhhHHHHHHHH--HHHHhHHHHHhCCHhhhhHHHHHHHHHHHHH---HHHHhh---ccc---chhHHHHHHHHHHHh
Confidence            22222222221111  1233454423444333333333333332222   122111   111   457999988865322


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCC-----------CCChhhcccc
Q 012950          234 PDMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQK-----------NPAPDGIGKL  302 (452)
Q Consensus       234 ~~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~-----------~~~~~~~~~l  302 (452)
                      .   ..++++++.++++.+++||+|||+++++|++++|++||++|+||++||++++++.           .++.+++++|
T Consensus       250 ~---~~~~~~~i~~~~~~~~~ag~~tta~tl~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~~~~~~~~~~~~~~~~~l~~l  326 (491)
T 3dax_A          250 L---STFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDL  326 (491)
T ss_dssp             H---BCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHTTTCCCCSSSCCCCCCHHHHHCC
T ss_pred             c---CCChHHHHHHHHHHHHHHhccchHHHHHHHHHHHHcCHHHHHHHHHHHHHHhhccccccccCCCccccCHHHHhcC
Confidence            1   2478999999999999999999999999999999999999999999999998742           3589999999


Q ss_pred             HHHHHHHHHhhcCCCCCCCccccccceeec----CCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCC-
Q 012950          303 KTMSMVINESLRLYPPAVNISRNVEREVRL----GKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKAS-  377 (452)
Q Consensus       303 p~l~a~i~E~lRl~p~~~~~~r~~~~d~~l----~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~-  377 (452)
                      |||+|||+|+||++|+ +.++|.+.+|+++    +||.|||||.|+++.|++||||++| +||++|+||||+++++... 
T Consensus       327 pyl~a~i~E~lRl~p~-~~~~R~~~~d~~l~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~-~dp~~F~PeRfl~~~~~~~~  404 (491)
T 3dax_A          327 PVLDSIIKESLRLSSA-SLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIY-PDPLTFKYDRYLDENGKTKT  404 (491)
T ss_dssp             HHHHHHHHHHHHHHEE-ECEEEEESSSEEEEETTEEEEECTTCEEEECTHHHHTCTTTS-SSTTSCCTTTTBCTTSSBCC
T ss_pred             HHHHHHHHHHHhcCCC-ccceeEecCCeEeecCCCcEEeCCCCEEEechHhhcCCcccC-CCHHHcCCccccCCCccccc
Confidence            9999999999999974 6779999999999    6899999999999999999999999 9999999999996532210 


Q ss_pred             ------CCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhcEEEeCCCCc--C--CC--ceeeEeecCCCceEEEEE
Q 012950          378 ------NNTPAAFLPFSSGPRICVGLNFAATEAKIALSMILQRYRFNLSPSYV--H--SP--VLVVTLRPQHGLQVIFQP  445 (452)
Q Consensus       378 ------~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~--~--~~--~~~~~~~p~~~~~v~~~~  445 (452)
                            ...+..|+|||+|+|.|+|++||.+|+++++|.||++|+|++.++..  .  ..  ....+..|..++.|+++.
T Consensus       405 ~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~r~  484 (491)
T 3dax_A          405 TFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKCPPLDQSRAGLGILPPLNDIEFKYKF  484 (491)
T ss_dssp             CCEETTEECSCSCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEETTTTCCCCCBCGGGTBEEECCBSSCCEEEEEE
T ss_pred             cccccCcCCccccccCCCCCCCCCcHHHHHHHHHHHHHHHHHHeeEEEccCCCCCCCCCcccccccccCCCCCceEEEEe
Confidence                  01356899999999999999999999999999999999999976521  1  11  123456888889998887


Q ss_pred             cc
Q 012950          446 LS  447 (452)
Q Consensus       446 r~  447 (452)
                      ..
T Consensus       485 ~~  486 (491)
T 3dax_A          485 KH  486 (491)
T ss_dssp             CC
T ss_pred             cc
Confidence            65


No 24 
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=100.00  E-value=5.3e-60  Score=464.50  Aligned_cols=372  Identities=14%  Similarity=0.154  Sum_probs=290.1

Q ss_pred             Cceeeec-cCcceEEeCCHHHHHHHHhcCCCCCCCCCc-hhh---HH-h-h---hc------CceeccCCccHHHHHhhh
Q 012950            1 MNFLTWY-GSRAQLVITQPELIKEILSNSDGTYPKVQA-PGF---LR-K-I---LG------DGLVTAGGENWHRQRKLA   64 (452)
Q Consensus         1 ~~~~~~~-g~~~~vvv~~p~~~~~il~~~~~~f~~~~~-~~~---~~-~-~---~g------~~l~~~~~~~w~~~Rr~~   64 (452)
                      |||++++ |+.+++++++++.+++++.++. .|++++. ...   .. . +   .|      .++++.+|+.|+++||++
T Consensus        39 pv~~~~~~g~~~~vvv~~~~~v~~vl~~~~-~fs~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~g~~~~~~Rr~~  117 (428)
T 1cpt_A           39 PLAMAHIEGYDPMWIATKHADVMQIGKQPG-LFSNAEGSEILYDQNNEAFMRSISGGCPHVIDSLTSMDPPTHTAYRGLT  117 (428)
T ss_dssp             SEEEECCTTSCCEEEECSHHHHHHHHHCTT-TEESSSSCSSCCCHHHHHHHHHHTTTSSCSSCCGGGCCTTHHHHHHHHH
T ss_pred             CeeeccccCCCCeEEEccHHHHHHHHcCch-hccCccccccCCcccccchhccccccccccccccccCChHHHHHHHHHh
Confidence            6889998 7899999999999999998653 6754432 111   11 1 2   32      578888999999999999


Q ss_pred             ccccchhhhhhhcchhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhh-HHHHHHHHHHHhh
Q 012950           65 TLAFYAESLRVTKSNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQE-FKLLTSEIISRTA  143 (452)
Q Consensus        65 ~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~-~~~~~~~~i~~~~  143 (452)
                      +++|++++++                          .+.+.+.++++.+++.|... ++++|+... ...+++++|+.+ 
T Consensus       118 ~~~fs~~~l~--------------------------~~~~~i~~~~~~l~~~l~~~-~~~~d~~~~~~~~~~~~vi~~~-  169 (428)
T 1cpt_A          118 LNWFQPASIR--------------------------KLEENIRRIAQASVQRLLDF-DGECDFMTDCALYYPLHVVMTA-  169 (428)
T ss_dssp             HTTSSHHHHG--------------------------GGHHHHHHHHHHHHHHHHTS-SSEEEHHHHTTTTHHHHHHHHH-
T ss_pred             hhhhCHHHHH--------------------------HHHHHHHHHHHHHHHHHHHh-CCCeehHHHHHhhhHHHHHHHH-
Confidence            9999999999                          99999999999999999763 368999854 567999999999 


Q ss_pred             cCCCccchhhHHHHHHhhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcH
Q 012950          144 FGSSYLEGESIFNKLTNMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDY  223 (452)
Q Consensus       144 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~  223 (452)
                      ||.++++.+.+............  .....+|++ .+++....++..++.+.+.+++.+.++++++.        ..+|+
T Consensus       170 fG~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~l-~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~dl  238 (428)
T 1cpt_A          170 LGVPEDDEPLMLKLTQDFFGVHE--PDEQAVAAP-RQSADEAARRFHETIATFYDYFNGFTVDRRSC--------PKDDV  238 (428)
T ss_dssp             HTCCGGGHHHHHHHHHTTTCC-------------------CHHHHHHHHHHHHHHHHHHHHHHHTTS--------CCSSH
T ss_pred             cCCCHhHHHHHHHHHHHHHhccc--ccccccccc-cccchhhHHHHHHHHHHHHHHHHHHHHHHHcC--------CCCcH
Confidence            99987654333322221111000  001123333 22211222355566777888888888776641        35799


Q ss_pred             HHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccH
Q 012950          224 FGLLLKAYHDPDMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLK  303 (452)
Q Consensus       224 l~~ll~~~~~~~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp  303 (452)
                      ++.|++...+   +..++++++++++..+++||+|||+++++|++++|++||++|+|+++|++                 
T Consensus       239 l~~ll~~~~~---~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~-----------------  298 (428)
T 1cpt_A          239 MSLLANSKLD---GNYIDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQLALAKSDPA-----------------  298 (428)
T ss_dssp             HHHHHHCBSS---SSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG-----------------
T ss_pred             HHHHHhcccc---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHhHH-----------------
Confidence            9999987532   34699999999999999999999999999999999999999999999963                 


Q ss_pred             HHHHHHHHhhcCCCCCCCccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCc
Q 012950          304 TMSMVINESLRLYPPAVNISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAA  383 (452)
Q Consensus       304 ~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~  383 (452)
                      ||+|||+|+||++|+++.++|.+.+|++++||.||||+.|+++.|++||||++| +||++|+||||.+           .
T Consensus       299 ~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~~-----------~  366 (428)
T 1cpt_A          299 LIPRLVDEAVRWTAPVKSFMRTALADTEVRGQNIKRGDRIMLSYPSANRDEEVF-SNPDEFDITRFPN-----------R  366 (428)
T ss_dssp             GHHHHHHHHHHHHCCBCCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTC-SSTTSCCTTCCSC-----------C
T ss_pred             HHHHHHHHHHHhCCcccccceeeCCCeeECCEEECCCCEEEeCHHHhCCChhhC-CChhhcCCCCCCC-----------C
Confidence            899999999999999998899999999999999999999999999999999999 9999999999941           3


Q ss_pred             ccccCCCCCCCcchHHHHHHHHHHHHHHHhhcE-EEeCCCCcCCCceeeEeecCCCceEEEEEc
Q 012950          384 FLPFSSGPRICVGLNFAATEAKIALSMILQRYR-FNLSPSYVHSPVLVVTLRPQHGLQVIFQPL  446 (452)
Q Consensus       384 ~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r  446 (452)
                      ++|||.|+|.|+|++||++|++++++.|+++|+ +++.+....  .....++...+++|.++|+
T Consensus       367 ~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~--~~~~~~~~~~~lpv~~~p~  428 (428)
T 1cpt_A          367 HLGFGWGAHMCLGQHLAKLEMKIFFEELLPKLKSVELSGPPRL--VATNFVGGPKNVPIRFTKA  428 (428)
T ss_dssp             CCTTCCSTTCCTTHHHHHHHHHHHHHHHGGGEEEEEESSCCEE--CCCSSBCSEEECEEEEEEC
T ss_pred             CCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhCCCceeCCCccc--ccCccccCcceeeEEeeCC
Confidence            899999999999999999999999999999997 888643211  1122334445789999875


No 25 
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=100.00  E-value=1.2e-60  Score=463.26  Aligned_cols=354  Identities=27%  Similarity=0.429  Sum_probs=286.6

Q ss_pred             CceeeeccCcceEEeCCHHHHHHHHhcCCCCCCCCC-chhhHHhhhcCceeccCCccHHHHHhhhccccchhhhhhhcch
Q 012950            1 MNFLTWYGSRAQLVITQPELIKEILSNSDGTYPKVQ-APGFLRKILGDGLVTAGGENWHRQRKLATLAFYAESLRVTKSN   79 (452)
Q Consensus         1 ~~~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~~~-~~~~~~~~~g~~l~~~~~~~w~~~Rr~~~~~f~~~~l~~~~~~   79 (452)
                      |||+ ++|+.++++++||+++++|+.++  .|++++ .........|.++++.+|+.|+++||++.++|++++++     
T Consensus        33 pv~~-~~g~~~~vvv~~~~~i~~il~~~--~f~~~~~~~~~~~~~~g~~l~~~~g~~h~~~R~~~~~~fs~~~l~-----  104 (389)
T 1n97_A           33 RLFL-PLPRFPLALIFDPEGVEGALLAE--GTTKATFQYRALSRLTGRGLLTDWGESWKEARKALKDPFLPKNVR-----  104 (389)
T ss_dssp             EEEE-CCTTCCEEEECSHHHHHHHHHCT--TEECCSHHHHHHHHHHCSSTTTCCHHHHHHHHHHHCGGGSHHHHH-----
T ss_pred             CeeE-ecCCccEEEECCHHHHHHHHhcC--CCCCChhHHHHHHHHhCCccccCCcHHHHHHHHHhCcccCHHHHH-----
Confidence            4788 89999999999999999999876  787765 43344455678898899999999999999999999999     


Q ss_pred             hhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhHHHHHHHHHHHhhcCCCccchhhHHHHHH
Q 012950           80 CLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEFKLLTSEIISRTAFGSSYLEGESIFNKLT  159 (452)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~  159 (452)
                                           .+.+.+.++++.+++.|.   ++++|+.+++..+++++++.++||.++++  ++...+.
T Consensus       105 ---------------------~~~~~i~~~~~~l~~~l~---~~~~dl~~~~~~~~~~vi~~~~fG~~~~~--~~~~~~~  158 (389)
T 1n97_A          105 ---------------------GYREAMEEEARAFFGEWR---GEERDLDHEMLALSLRLLGRALFGKPLSP--SLAEHAL  158 (389)
T ss_dssp             ---------------------TTHHHHHHHHHHHHHTCC---SCCEEHHHHHHHHHHHHHHHHHHSSCCCH--HHHHHHH
T ss_pred             ---------------------HHHHHHHHHHHHHHHHcc---CCcCcHHHHHHHHHHHHHHHHHcCCcchH--HHHHHHH
Confidence                                 999999999999999987   46899999999999999999999998872  3333333


Q ss_pred             hhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHhcCCCCCCCC
Q 012950          160 NMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKAYHDPDMTKR  239 (452)
Q Consensus       160 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~  239 (452)
                      .+.....    ...++.+ .|+|....++..++.+.+.+++.+.++++                   |+         ..
T Consensus       159 ~~~~~~~----~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~i~~r-------------------ll---------~~  205 (389)
T 1n97_A          159 KALDRIM----AQTRSPL-ALLDLAAEARFRKDRGALYREAEALIVHP-------------------PL---------SH  205 (389)
T ss_dssp             HHHHHHH----HHHHCGG-GGGCHHHHHHHHHHHHHHHHHHGGGTTST-------------------TG---------GG
T ss_pred             HHHHHHH----HHHhhHH-HhcCCchhHHHHHHHHHHHHHHHHHHHHH-------------------hc---------cc
Confidence            3222211    1111222 34442222233333334444433333211                   22         14


Q ss_pred             CCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHHHHHHHHHhhcCCCCC
Q 012950          240 ISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKTMSMVINESLRLYPPA  319 (452)
Q Consensus       240 l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~  319 (452)
                      ++++++++++..+++||+|||+++++|++++|++||++|+++++|++.+.                 |||+|+||++|++
T Consensus       206 l~~~~l~~~~~~~~~aG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~~~~-----------------a~i~E~lRl~p~~  268 (389)
T 1n97_A          206 LPRERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAAL-----------------AAFQEALRLYPPA  268 (389)
T ss_dssp             SCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHHH-----------------HHHHHHHHHSCSS
T ss_pred             CCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH-----------------HHHHHHHhcCCCc
Confidence            89999999999999999999999999999999999999999999998873                 9999999999999


Q ss_pred             CCccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcccccCCCCCCCcchHH
Q 012950          320 VNISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPFSSGPRICVGLNF  399 (452)
Q Consensus       320 ~~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~  399 (452)
                      +..+|.+.+|++++||.||||+.|.++.+++|||  +| +||++|+||||+++ .   ...+..++|||.|+|.|+|++|
T Consensus       269 ~~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rd--~~-~dp~~F~PeR~l~~-~---~~~~~~~~~FG~G~r~C~G~~l  341 (389)
T 1n97_A          269 WILTRRLERPLLLGEDRLPPGTTLVLSPYVTQRL--HF-PDGEAFRPERFLEE-R---GTPSGRYFPFGLGQRLCLGRDF  341 (389)
T ss_dssp             CCEEEEESSCEEETTEEECTTCEEEECHHHHHHH--SS-TTTTSCCTTHHHHS-C---CCCBTTBCTTCCSTTCCTTHHH
T ss_pred             cccceeeCCCceECCEEeCCCCEEEECHHHHhhh--cC-CCccccCCccCCCC-C---CCCCCCccCCCCCCCCCchHHH
Confidence            9889999999999999999999999999999999  99 99999999999864 1   1345689999999999999999


Q ss_pred             HHHHHHHHHHHHHhhcEEEeCCCCcCCCceeeEeecCCCceEEEEEcc
Q 012950          400 AATEAKIALSMILQRYRFNLSPSYVHSPVLVVTLRPQHGLQVIFQPLS  447 (452)
Q Consensus       400 a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r~  447 (452)
                      |.+|++++++.|+++|++++.++...  ....++.|..+++|.+++|.
T Consensus       342 A~~e~~~~la~ll~~f~~~~~~~~~~--~~~~~~~p~~~~~v~~~~~~  387 (389)
T 1n97_A          342 ALLEGPIVLRAFFRRFRLDPLPFPRV--LAQVTLRPEGGLPARPREEV  387 (389)
T ss_dssp             HHHHHHHHHHHHHTTCBCCCCCCCCE--EESSSEEETTCCEECCBC--
T ss_pred             HHHHHHHHHHHHHHhceEEeCCCCcc--cceEEeeeCCCceEEEeecc
Confidence            99999999999999999998765432  34567789889999998864


No 26 
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=100.00  E-value=2.7e-59  Score=456.39  Aligned_cols=363  Identities=21%  Similarity=0.285  Sum_probs=292.6

Q ss_pred             CceeeeccCcceEEeCCHHHHHHHHhcCCCCCCCCCc------hhhHHhhhcCceeccCCccHHHHHhhhccccchhhhh
Q 012950            1 MNFLTWYGSRAQLVITQPELIKEILSNSDGTYPKVQA------PGFLRKILGDGLVTAGGENWHRQRKLATLAFYAESLR   74 (452)
Q Consensus         1 ~~~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~~~~------~~~~~~~~g~~l~~~~~~~w~~~Rr~~~~~f~~~~l~   74 (452)
                      |||++++|+.++++++||+.+++++.++. .|+.++.      ........+.++++.+|+.|+++||+++++|++++++
T Consensus        27 pv~~~~~~~~~~vvv~~~~~v~~vl~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~h~~~Rr~~~~~fs~~~l~  105 (404)
T 3ejb_B           27 PIYKGSFLKYPGWYVTGYEETAAILKDAR-FKVRTPLPESSTKYQDLSHVQNQMMLFQNQPDHRRLRTLASGAFTPRTTE  105 (404)
T ss_dssp             SEEEEEETTEEEEEECCHHHHHHHHHCTT-EECCCSSCTTCCTTHHHHHHHHTSGGGCCTTHHHHHHHHHHGGGSHHHHH
T ss_pred             CEeeccCCCCCEEEEecHHHHHHHHhCcc-cccCcccccccccccchhhhhhcchhhcCCchHHHHHHHHHhhcCHHHHH
Confidence            68999999999999999999999999764 6654432      1123344678899999999999999999999999999


Q ss_pred             hhcchhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhH-HHHHHHHHHHhhcCCCccchhh
Q 012950           75 VTKSNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEF-KLLTSEIISRTAFGSSYLEGES  153 (452)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~~~~~~  153 (452)
                                                .+.+.+.+++..+++.|..  ++++|+...+ ..+++++++.+ ||.+.++.+.
T Consensus       106 --------------------------~~~~~i~~~~~~ll~~l~~--~~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~~~  156 (404)
T 3ejb_B          106 --------------------------SYQPYIIETVHHLLDQVQG--KKKMEVISDFAFPLASFVIANI-IGVPEEDREQ  156 (404)
T ss_dssp             --------------------------TTHHHHHHHHHHHHHTTTT--TSEEEHHHHTHHHHHHHHHHHH-HTCCGGGHHH
T ss_pred             --------------------------HHHHHHHHHHHHHHHHhhh--cCCcchHHHHHHHHHHHHHHHH-cCCCHHHHHH
Confidence                                      9999999999999999976  5789986555 45889999985 8987764333


Q ss_pred             HHHHHHhhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHhcCC
Q 012950          154 IFNKLTNMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKAYHD  233 (452)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~  233 (452)
                      +....    ..+..   ....|+.     ........+..+.+.+++.+.++++++.        ..+|+++.|+ ...+
T Consensus       157 ~~~~~----~~~~~---~~~~p~~-----~~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~d~l~~ll-~~~~  215 (404)
T 3ejb_B          157 LKEWA----ASLIQ---TIDFTRS-----RKALTEGNIMAVQAMAYFKELIQKRKRH--------PQQDMISMLL-KGRE  215 (404)
T ss_dssp             HHHHH----HHHHG---GGSTTCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHH-HC--
T ss_pred             HHHHH----HHHHH---hccCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHhC--------CcchHHHHHH-hccc
Confidence            32221    11111   1111211     0123455667778888888888877642        5689999999 4322


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHHHHHHHHHhh
Q 012950          234 PDMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKTMSMVINESL  313 (452)
Q Consensus       234 ~~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~l  313 (452)
                         +..++++++++++..+++||+|||+++++|++++|++||++|+++++|+                 .|++|||+|+|
T Consensus       216 ---~~~ls~~el~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~-----------------~~l~a~i~E~l  275 (404)
T 3ejb_B          216 ---KDKLTEEEAASTCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLRENP-----------------DLIGTAVEECL  275 (404)
T ss_dssp             -----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCG-----------------GGHHHHHHHHH
T ss_pred             ---CCCCCHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHCHHHHHHHHhCH-----------------HHHHHHHHHHH
Confidence               3469999999999999999999999999999999999999999999995                 47999999999


Q ss_pred             cCCCCCCCccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcccccCCCCCC
Q 012950          314 RLYPPAVNISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPFSSGPRI  393 (452)
Q Consensus       314 Rl~p~~~~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~  393 (452)
                      |++|+++..+|++.+|++++||.||||+.|.++.+++||||++| +||++|+||||-           ..++|||.|+|.
T Consensus       276 Rl~p~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~rdp~~~-~dp~~F~p~R~~-----------~~~~~Fg~G~r~  343 (404)
T 3ejb_B          276 RYESPTQMTARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIF-TNPDVFDITRSP-----------NPHLSFGHGHHV  343 (404)
T ss_dssp             HHSCSBCEEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTS-SSTTSCCTTCSS-----------CCCCTTCCSTTC
T ss_pred             HhCCcccccceEeCCCeEECCEEECCCCEEEecHHHhCCChhhC-CCcceeCCCCCC-----------CCCCCCCCcCcc
Confidence            99999997799999999999999999999999999999999999 999999999982           248999999999


Q ss_pred             CcchHHHHHHHHHHHHHHHhhc-EEEeCCCCcCCCceeeEeecCCCceEEEEEcc
Q 012950          394 CVGLNFAATEAKIALSMILQRY-RFNLSPSYVHSPVLVVTLRPQHGLQVIFQPLS  447 (452)
Q Consensus       394 C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r~  447 (452)
                      |+|++||.+|++++++.|+++| ++++.++. ........+++...++|.+++|-
T Consensus       344 C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~-~~~~~~~~~~~~~~lpv~~~~~~  397 (404)
T 3ejb_B          344 CLGSSLARLEAQIAINTLLQRMPSLNLADFE-WRYRPLFGFRALEELPVTFEASW  397 (404)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHCTTCEEC--C-CCBCSCSSBCCBSCCEEECC---
T ss_pred             CcCHHHHHHHHHHHHHHHHHhCcccccCCCC-ceeccCcccCCcceeEEEEeccc
Confidence            9999999999999999999999 99998542 22233455677789999999874


No 27 
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=100.00  E-value=4.3e-59  Score=453.64  Aligned_cols=359  Identities=20%  Similarity=0.267  Sum_probs=291.6

Q ss_pred             CceeeeccCcceEEeCCHHHHHHHHhcCCCCCCCCCchh---------hHHhhhcCceeccCCccHHHHHhhhccccchh
Q 012950            1 MNFLTWYGSRAQLVITQPELIKEILSNSDGTYPKVQAPG---------FLRKILGDGLVTAGGENWHRQRKLATLAFYAE   71 (452)
Q Consensus         1 ~~~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~~~~~~---------~~~~~~g~~l~~~~~~~w~~~Rr~~~~~f~~~   71 (452)
                      |||+ +  +.+.++|+||+++++||.+ . .|++.....         .+..+++.++++.+|+.|+++||++.++|+++
T Consensus        27 pv~~-~--g~~~~vv~~~~~v~~vl~~-~-~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~h~~~R~~~~~~fs~~  101 (397)
T 3buj_A           27 PVHR-G--AHRVWYVSRFADVRAVLGD-E-RFARTGIRRFWTDLVGPGLLAEIVGDIILFQDEPDHGRLRGVVGPAFSPS  101 (397)
T ss_dssp             SEEE-C--GGGCEEECSHHHHHHHHTC-T-TEESHHHHHHHHHHHCSSHHHHHHTTCGGGCCTTHHHHHHHHHGGGSSTT
T ss_pred             Ceee-C--CCCeEEEcCHHHHHHHHcC-C-CcccCcccccccccccccccccccccccccCCchhHHHHHHHHHHhcCHH
Confidence            5677 5  5789999999999999986 3 575543211         11222267888899999999999999999999


Q ss_pred             hhhhhcchhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhh-HHHHHHHHHHHhhcCCCccc
Q 012950           72 SLRVTKSNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQE-FKLLTSEIISRTAFGSSYLE  150 (452)
Q Consensus        72 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~-~~~~~~~~i~~~~fG~~~~~  150 (452)
                      +++                          .+.+.+.+.++.+++.|..  ++++|+... ...+++++|+.+ ||.++++
T Consensus       102 ~l~--------------------------~~~~~i~~~~~~l~~~l~~--~~~~dl~~~~~~~~~~~vi~~~-~G~~~~~  152 (397)
T 3buj_A          102 ALR--------------------------RLEPVIAGTVDDLLRPALA--RGAMDVVDELAYPLALRAVLGL-LGLPAAD  152 (397)
T ss_dssp             TTG--------------------------GGHHHHHHHHHHHHHHHHT--TTEEEHHHHTHHHHHHHHHHHH-HTCCGGG
T ss_pred             HHH--------------------------HHHHHHHHHHHHHHHHHhh--cCCeehHHHHHHHhHHHHHHHH-hCCCHHH
Confidence            999                          9999999999999999975  468998755 578999999998 9998764


Q ss_pred             hhhHHHHHHhhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHh
Q 012950          151 GESIFNKLTNMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKA  230 (452)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~  230 (452)
                      .+.+...    ...+...     ++.   .++....++..++.+.+.+++.+.++++++.        ..+|+++.|++.
T Consensus       153 ~~~~~~~----~~~~~~~-----~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~dll~~ll~~  212 (397)
T 3buj_A          153 WGAVGRW----SRDVGRT-----LDR---GASAEDMRRGHAAIAEFADYVERALARRRRE--------GGEDLLALMLDA  212 (397)
T ss_dssp             HHHHHHH----HHHHHGG-----GCS---SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------CCCSHHHHHHHH
T ss_pred             HHHHHHH----HHHHHhh-----cCC---CCChHHHHHHHHHHHHHHHHHHHHHHHHHcC--------CCCCHHHHHHHh
Confidence            3332221    1111110     111   1111223455667778888888888888764        347999999987


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHHHHHHHH
Q 012950          231 YHDPDMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKTMSMVIN  310 (452)
Q Consensus       231 ~~~~~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~  310 (452)
                      ..+   +. ++++++++++..+++||+|||+++++|++++|++||++|+++++|+                 .||+|||+
T Consensus       213 ~~~---~~-ls~~ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~-----------------~~l~a~i~  271 (397)
T 3buj_A          213 HDR---GL-MSRNEIVSTVVTFIFTGHETVASQVGNAVLSLLAHPDQLDLLRRRP-----------------DLLAQAVE  271 (397)
T ss_dssp             HHT---TS-SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHCG-----------------GGHHHHHH
T ss_pred             hhc---CC-CCHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHhCHHHHHHHhhCH-----------------HHHHHHHH
Confidence            532   23 9999999999999999999999999999999999999999999994                 38999999


Q ss_pred             HhhcCCCCCCCccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcccccCCC
Q 012950          311 ESLRLYPPAVNISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPFSSG  390 (452)
Q Consensus       311 E~lRl~p~~~~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G  390 (452)
                      |+||++|+++..+|.+.+|++++||.||||+.|+++.+++||||++| +||++|+||||.           ..++|||.|
T Consensus       272 E~lRl~p~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dp~~F~PeR~~-----------~~~~~FG~G  339 (397)
T 3buj_A          272 ECLRYDPSVQSNTRQLDVDVELRGRRLRRDDVVVVLAGAANRDPRRY-DRPDDFDIERDP-----------VPSMSFGAG  339 (397)
T ss_dssp             HHHHHSCSCCEEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTC-SSTTSCCTTSCC-----------CCCSTTCCG
T ss_pred             HHHhhcCcccCcceEECCCEEECCEEECCCCEEEEChhhhCCCcccc-CCccccCCCCCC-----------CCCCCCCCC
Confidence            99999999997799999999999999999999999999999999999 999999999995           248999999


Q ss_pred             CCCCcchHHHHHHHHHHHHHHHhhc-EEEeCCC-CcCCCceeeEeecCCCceEEEEEcc
Q 012950          391 PRICVGLNFAATEAKIALSMILQRY-RFNLSPS-YVHSPVLVVTLRPQHGLQVIFQPLS  447 (452)
Q Consensus       391 ~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~p~~~~~v~~~~r~  447 (452)
                      +|.|+|++||.+|++++++.| ++| ++++.++ .........++++..+++|.+++|+
T Consensus       340 ~r~C~G~~lA~~e~~~~l~~l-~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~rg  397 (397)
T 3buj_A          340 MRYCLGSYLARTQLRAAVAAL-ARLPGLRLGCASDALAYQPRTMFRGLASLPIAFTPGG  397 (397)
T ss_dssp             GGCCTTHHHHHHHHHHHHHHH-HTSTTCEESSCSTTCCBCSCSSCCCBSCCEEECCTTC
T ss_pred             CccCCCHHHHHHHHHHHHHHH-hcCCCceeCCCCcccccccccccCCCcceeEEecCCC
Confidence            999999999999999999999 999 8999765 2222222345677889999999875


No 28 
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=100.00  E-value=1.9e-58  Score=452.27  Aligned_cols=375  Identities=15%  Similarity=0.244  Sum_probs=299.6

Q ss_pred             CceeeeccCcceEEeCCHHHHHHHHhcCCCCCCCCC-ch-hhHHhhhc-CceeccCCccHHHHHhhhccccchhhhhhhc
Q 012950            1 MNFLTWYGSRAQLVITQPELIKEILSNSDGTYPKVQ-AP-GFLRKILG-DGLVTAGGENWHRQRKLATLAFYAESLRVTK   77 (452)
Q Consensus         1 ~~~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~~~-~~-~~~~~~~g-~~l~~~~~~~w~~~Rr~~~~~f~~~~l~~~~   77 (452)
                      |||++++++.+.+++++|++++.++. + ..|++.. .+ .....++| .++++.+|+.|+++|+++.++|++++++   
T Consensus        35 pv~~~~~~g~~~v~v~~~~~~~~l~~-~-~~~~~~~~~~~~~~~~~~g~~~l~~~dg~~h~~~R~~~~~~f~~~~l~---  109 (417)
T 1izo_A           35 DLFQARLLGKNFICMTGAEAAKVFYD-T-DRFQRQNALPKRVQKSLFGVNAIQGMDGSAHIHRKMLFLSLMTPPHQK---  109 (417)
T ss_dssp             SEEEEEETTEEEEEECSHHHHHHHTC-T-TTEECTTCSCHHHHTTTTCTTCGGGCCHHHHHHHHHHHHHTSSHHHHH---
T ss_pred             CeEEeecCCccEEEECCHHHHHHHhc-c-cccccccccccchhhhhccccceeecCChHHHHHHHHhhhhcCHHHHH---
Confidence            58899988899999999999986543 3 3565432 22 23344566 5788899999999999999999999999   


Q ss_pred             chhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhHHHHHHHHHHHhhcCCCccchhhHHHH
Q 012950           78 SNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEFKLLTSEIISRTAFGSSYLEGESIFNK  157 (452)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~  157 (452)
                                             .+.+.+.+.+.++++.|..  ++++|+...+..+++++|+.+ ||.++++. +....
T Consensus       110 -----------------------~~~~~i~~~~~~l~~~l~~--~~~~dl~~~~~~~~~~vi~~~-~G~~~~~~-~~~~~  162 (417)
T 1izo_A          110 -----------------------RLAELMTEEWKAAVTRWEK--ADEVVLFEEAKEILCRVACYW-AGVPLKET-EVKER  162 (417)
T ss_dssp             -----------------------HHHHHHHHHHHHHHHHHTT--SSEEEHHHHHHHHHHHHHHHH-HTCCCCTT-THHHH
T ss_pred             -----------------------HHHHHHHHHHHHHHHHHhc--CCCeeHHHHHHHHHHHHHHHH-cCCCCCch-HHHHH
Confidence                                   9999999999999999976  578999999999999999998 69887643 22222


Q ss_pred             HHhhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHhcCCCCCC
Q 012950          158 LTNMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKAYHDPDMT  237 (452)
Q Consensus       158 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~  237 (452)
                      ...+...+..      +.   .+.+  ......++.+.+.+++.+.|+++++....    ...+|+++.|++....+  +
T Consensus       163 ~~~~~~~~~~------~~---~~~~--~~~~~~~~~~~~~~~~~~~i~~r~~~~~~----~~~~d~l~~ll~~~~~~--g  225 (417)
T 1izo_A          163 ADDFIDMVDA------FG---AVGP--RHWKGRRARPRAEEWIEVMIEDARAGLLK----TTSGTALHEMAFHTQED--G  225 (417)
T ss_dssp             HHHHHHHHHH------TT---CCSH--HHHHHHHHHHHHHHHHHHHHHHHHTTSSC----CCTTSHHHHHHHCBCTT--S
T ss_pred             HHHHHHHHhh------cc---cCCc--cchhHHHHHHHHHHHHHHHHHHHHhhccC----CCcCCHHHHHHHhcccc--C
Confidence            2221111111      00   0111  12345567778888888888887653211    14579999999865432  3


Q ss_pred             CCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHHHHHHHHHhhcCCC
Q 012950          238 KRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKTMSMVINESLRLYP  317 (452)
Q Consensus       238 ~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p  317 (452)
                      ..++++++.+++..++ ||++||+++++|++++|++||++|++|++|                ++|||+|||+|+||++|
T Consensus       226 ~~l~~~~~~~~~~~~~-ag~~tt~~~l~~~l~~L~~~P~~~~~l~~E----------------~~~~l~a~i~E~lRl~p  288 (417)
T 1izo_A          226 SQLDSRMAAIELINVL-RPIVAISYFLVFSALALHEHPKYKEWLRSG----------------NSREREMFVQEVRRYYP  288 (417)
T ss_dssp             CBCCHHHHHHHHHHHH-HHHHTHHHHHHHHHHHHHHSTHHHHHHHTC----------------CHHHHHHHHHHHHHHSC
T ss_pred             CCCCHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHhhCHHHHHHHHhc----------------CCHHHHHHHHHHhhcCC
Confidence            4688888887776654 999999999999999999999999999997                48999999999999999


Q ss_pred             CCCCccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcccccCCC----CCC
Q 012950          318 PAVNISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPFSSG----PRI  393 (452)
Q Consensus       318 ~~~~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G----~r~  393 (452)
                      +++..+|.+.+|++++||.||||+.|+++.+++||||++| +||++|+||||++..     .....++|||.|    +|.
T Consensus       289 ~~~~~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~rdp~~~-~dp~~F~P~R~~~~~-----~~~~~~~~FG~G~r~~~r~  362 (417)
T 1izo_A          289 FGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLW-DHPDEFRPERFAERE-----ENLFDMIPQGGGHAEKGHR  362 (417)
T ss_dssp             CCCEEEEEECSCEEETTEEECTTCEEEEEHHHHHTCTTTS-SSTTSCCGGGGTTCC-----CCSSSCCTTCSSCTTSSSC
T ss_pred             cccccceeecCCeeECCEEECCCCEEEecHHHhhcCcccc-CCccccChhhcCCCC-----CCCcceeCCCCCCCCCCCc
Confidence            9998899999999999999999999999999999999999 999999999999652     245689999999    599


Q ss_pred             CcchHHHHHHHHHHHHHHHhhcEEEeCCCCcCCCceeeEeecCCCceEEEEEcc
Q 012950          394 CVGLNFAATEAKIALSMILQRYRFNLSPSYVHSPVLVVTLRPQHGLQVIFQPLS  447 (452)
Q Consensus       394 C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r~  447 (452)
                      |+|++||.+|++++++.|+++|+|++.++.........++.|.++++|++++|.
T Consensus       363 C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~r~  416 (417)
T 1izo_A          363 CPGEGITIEVMKASLDFLVHQIEYDVPEQSLHYSLARMPSLPESGFVMSGIRRK  416 (417)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHTEEEECCSCCCCCCSSSSSCCCTTCCEEEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHHHHhCeEEeCCCCcCcccccCCCCCCCCceEeeeeCC
Confidence            999999999999999999999999987652222222356789999999999985


No 29 
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=100.00  E-value=1e-58  Score=452.38  Aligned_cols=359  Identities=16%  Similarity=0.196  Sum_probs=294.7

Q ss_pred             CceeeeccCcceEEeCCHHHHHHHHhcCCCCCCCCCchh-h------HHhhhcCceeccCCccHHHHHhhhccccchhhh
Q 012950            1 MNFLTWYGSRAQLVITQPELIKEILSNSDGTYPKVQAPG-F------LRKILGDGLVTAGGENWHRQRKLATLAFYAESL   73 (452)
Q Consensus         1 ~~~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~~~~~~-~------~~~~~g~~l~~~~~~~w~~~Rr~~~~~f~~~~l   73 (452)
                      |||++++|+.+.++++||+++++|+.++.  |++++... .      +....+.++++.+|+.|+++||++.++|+++++
T Consensus        34 pv~~~~~~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~h~~~R~~~~~~fs~~~l  111 (411)
T 3a4g_A           34 PVRKLALPDGPVWLLTRYADVREAFVDPR--LSKDWRHTLPEDQRADMPATPTPMMILMDPPDHTRLRKLVGRSFTVRRM  111 (411)
T ss_dssp             SEEEEEETTEEEEEECSHHHHHHHHTCTT--EESCGGGGSCGGGCTTCCSCSSCCGGGCCTTHHHHHHHHHHTTCCHHHH
T ss_pred             CeeeccCCCCCEEEEecHHHHHHHHhCCC--cccccccccccccccccCcccccccccCCchHHHHHHHHhhhhhCHHHH
Confidence            68999999999999999999999998753  86654211 0      111245778889999999999999999999999


Q ss_pred             hhhcchhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhh-hHHHHHHHHHHHhhcCCCccchh
Q 012950           74 RVTKSNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQ-EFKLLTSEIISRTAFGSSYLEGE  152 (452)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~-~~~~~~~~~i~~~~fG~~~~~~~  152 (452)
                      +                          .+.+.+.+.++.+++.|..  .+++|+.. +...+++++|+.+ ||.++++.+
T Consensus       112 ~--------------------------~~~~~i~~~~~~l~~~l~~--~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~~~  162 (411)
T 3a4g_A          112 N--------------------------ELEPRITEIADGLLAGLPT--DGPVDLMREYAFQIPVQVICEL-LGVPAEDRD  162 (411)
T ss_dssp             H--------------------------HHHHHHHHHHHHHHHHSCS--SSCEEHHHHTTTTHHHHHHHHH-HTCCGGGHH
T ss_pred             H--------------------------HHHHHHHHHHHHHHHHHHh--cCCccHHHHHHHHhHHHHHHHH-hCCCHHHHH
Confidence            9                          9999999999999999975  46899975 4568999999975 998876433


Q ss_pred             hHHHHHHhhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHhcC
Q 012950          153 SIFNKLTNMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKAYH  232 (452)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~  232 (452)
                      .+....    ..+..    . .|      +    .+..++.+.+.+++.+.++++++.        ..+|+++.|++...
T Consensus       163 ~~~~~~----~~~~~----~-~p------~----~~~~~~~~~~~~~~~~~i~~r~~~--------~~~d~l~~ll~~~~  215 (411)
T 3a4g_A          163 DFSAWS----SVLVD----D-SP------A----DDKNAAMGKLHGYLSDLLERKRTE--------PDDALLSSLLAVSD  215 (411)
T ss_dssp             HHHHHH----HHHTT----S-SC------T----TTHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHHCCC
T ss_pred             HHHHHH----HHHhc----c-CC------H----HHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHHhhc
Confidence            322211    11100    0 11      1    245567778888888888887652        34799999998653


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHHHHHHHHHh
Q 012950          233 DPDMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKTMSMVINES  312 (452)
Q Consensus       233 ~~~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~  312 (452)
                      ++  +..++++++++++..+++||+|||+++++|++++|++||++|+++++|+                 .||+|||+|+
T Consensus       216 ~~--~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~-----------------~~l~a~i~E~  276 (411)
T 3a4g_A          216 ED--GDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLALLTHPDQRKLLAEDP-----------------SLISSAVEEF  276 (411)
T ss_dssp             TT--CCCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCG-----------------GGHHHHHHHH
T ss_pred             cC--CCCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHhCHHHHHHHhcCH-----------------HHHHHHHHHH
Confidence            21  3469999999999999999999999999999999999999999999984                 4899999999


Q ss_pred             hcCCCCCC-CccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcccccCCCC
Q 012950          313 LRLYPPAV-NISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPFSSGP  391 (452)
Q Consensus       313 lRl~p~~~-~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~  391 (452)
                      ||++|+++ ..+|.+.+|++++||.||||+.|+++.|++||||++| +||++|+||||.           ..++|||.|+
T Consensus       277 lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~~~l~FG~G~  344 (411)
T 3a4g_A          277 LRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWM-PEPDRLDITRDA-----------SGGVFFGHGI  344 (411)
T ss_dssp             HHHTCSBCBCCCEEESSCEEETTEEECTTCEEEEBHHHHTTCTTTS-SSTTSCCTTSCC-----------TTCCTTCCST
T ss_pred             HHhcccccCCceeEeCCCEEECCEEECCCCEEEeChhhhCCChhhc-CCccccCCCCCC-----------CCCCCCCCCC
Confidence            99999999 6799999999999999999999999999999999999 999999999983           2589999999


Q ss_pred             CCCcchHHHHHHHHHHHHHHHhhc-EEEeCCCC-cCCCceeeEeecCCCceEEEEEccc
Q 012950          392 RICVGLNFAATEAKIALSMILQRY-RFNLSPSY-VHSPVLVVTLRPQHGLQVIFQPLSV  448 (452)
Q Consensus       392 r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~-~~~~~~~~~~~p~~~~~v~~~~r~~  448 (452)
                      |.|+|++||.+|++++++.|+++| ++++.++. ........++++..+++|.+++|..
T Consensus       345 r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~~~r~~  403 (411)
T 3a4g_A          345 HFCLGAQLARLEGRVAIGRLFADRPELALAVGLDELVYRESTLVRGLSRMPVTMGPRSA  403 (411)
T ss_dssp             TCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCCCTTBCCBSCCEEECCCCCC
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHhCCCcEECCCccccccccCccccCcceeEEEecCcch
Confidence            999999999999999999999999 69987431 2222223456777899999999874


No 30 
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=100.00  E-value=5e-59  Score=458.08  Aligned_cols=362  Identities=17%  Similarity=0.241  Sum_probs=289.5

Q ss_pred             Cceeeec-cCcceEEeCCHHHHHHHHhcCCCCCCCCCch---hhH--HhhhcCceeccCCccHHHHHhhhccccchhhhh
Q 012950            1 MNFLTWY-GSRAQLVITQPELIKEILSNSDGTYPKVQAP---GFL--RKILGDGLVTAGGENWHRQRKLATLAFYAESLR   74 (452)
Q Consensus         1 ~~~~~~~-g~~~~vvv~~p~~~~~il~~~~~~f~~~~~~---~~~--~~~~g~~l~~~~~~~w~~~Rr~~~~~f~~~~l~   74 (452)
                      |||++++ |+.++++++||+++++|+.++  .|++++..   ...  ....+.++++.+|+.|+++||++.++|++++++
T Consensus        60 pv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~~~~~fs~~~l~  137 (436)
T 2cd8_A           60 PAHRVRTPEGDEVWLVVGYDRARAVLADP--RFSKDWRNSTTPLTEAEAALNHNMLESDPPRHTRLRKLVAREFTMRRVE  137 (436)
T ss_dssp             SEEEEECSSCCEEEEECSHHHHHHHHHCT--TEECCGGGCSSCCCTTGGGTCCSGGGCCTTHHHHHHHHHGGGSSHHHHH
T ss_pred             CeeeeccCCCCeEEEEcCHHHHHHHHcCC--CCcccccccccccccccccccccccccCchHHHHHHHHhHHhhCHHHHH
Confidence            6899998 789999999999999999875  57554421   111  123467888899999999999999999999999


Q ss_pred             hhcchhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhH-HHHHHHHHHHhhcCCCccchhh
Q 012950           75 VTKSNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEF-KLLTSEIISRTAFGSSYLEGES  153 (452)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~~~~~~  153 (452)
                                                .+.+.+.+.++.+++.|....++++|+...+ ..+++++|+. +||.+.++.+.
T Consensus       138 --------------------------~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~~vi~~-~~G~~~~~~~~  190 (436)
T 2cd8_A          138 --------------------------LLRPRVQEIVDGLVDAMLAAPDGRADLMESLAWPLPITVISE-LLGVPEPDRAA  190 (436)
T ss_dssp             --------------------------TTHHHHHHHHHHHHHHHHTCTTSCEEHHHHTTTHHHHHHHHH-HHTCCGGGHHH
T ss_pred             --------------------------HHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHHHHH-HhCCCHHHHHH
Confidence                                      9999999999999999974235789999977 5799999998 69987764333


Q ss_pred             HHHHHHhhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHhcCC
Q 012950          154 IFNKLTNMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKAYHD  233 (452)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~  233 (452)
                      +......    +..      .    .  +   ..+..++.+.+.+++.+.++++++.        ..+|+++.|++...+
T Consensus       191 ~~~~~~~----~~~------~----~--~---~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~d~l~~ll~~~~~  243 (436)
T 2cd8_A          191 FRVWTDA----FVF------P----D--D---PAQAQTAMAEMSGYLSRLIDSKRGQ--------DGEDLLSALVRTSDE  243 (436)
T ss_dssp             HHHHHHH----HHS------C----S--S---TTHHHHHHHHHHHHHHHHHHHHTTS--------CCCSHHHHHHHHHHH
T ss_pred             HHHHHHH----Hhc------c----C--C---HHHHHHHHHHHHHHHHHHHHHHhcC--------CCCCHHHHHHHhhhc
Confidence            2221111    100      0    0  0   1345667778888888888776642        347999999986432


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHHHHHHHHHhh
Q 012950          234 PDMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKTMSMVINESL  313 (452)
Q Consensus       234 ~~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~l  313 (452)
                      +  +..++++++++++..+++||+|||+++++|++++|++||++|++|++|+                 .||+|||+|+|
T Consensus       244 ~--~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~e~-----------------~~l~a~i~E~l  304 (436)
T 2cd8_A          244 D--GSRLTSEELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRADM-----------------TLLDGAVEEML  304 (436)
T ss_dssp             C--TTTSCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCHHHHHHHHHCG-----------------GGHHHHHHHHH
T ss_pred             c--CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHhhCh-----------------hhHHHHHHHHH
Confidence            1  3469999999999999999999999999999999999999999999984                 47999999999


Q ss_pred             cCCCCCC-CccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcccccCCCCC
Q 012950          314 RLYPPAV-NISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPFSSGPR  392 (452)
Q Consensus       314 Rl~p~~~-~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r  392 (452)
                      |++|+++ ..+|.+.+|++++||.||||+.|+++.|++||||++| +||++|+||||-           ..++|||.|+|
T Consensus       305 Rl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~~~~pFG~G~r  372 (436)
T 2cd8_A          305 RYEGPVESATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERF-PDPHRFDIRRDT-----------AGHLAFGHGIH  372 (436)
T ss_dssp             HHHCSBSSCCCBEESSCEEETTEEECTTCCEEECHHHHTTCTTTS-SSTTSCCTTSCC-----------TTCCTTCCSTT
T ss_pred             HhcCcccCceeEEeCCCeEECCEEECCCCEEEeChHHhCCCcccC-CCccccCCCCCC-----------CCCCCCCCCCC
Confidence            9999999 6799999999999999999999999999999999999 999999999951           26999999999


Q ss_pred             CCcchHHHHHHHHHHHHHHHhhc-EEEeCCC-CcCCCceeeEeecCCCceEEEEEcccc
Q 012950          393 ICVGLNFAATEAKIALSMILQRY-RFNLSPS-YVHSPVLVVTLRPQHGLQVIFQPLSVN  449 (452)
Q Consensus       393 ~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~p~~~~~v~~~~r~~~  449 (452)
                      .|+|++||++|++++++.|+++| ++++..+ .........++++..+++|.+++|+..
T Consensus       373 ~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~r~~~  431 (436)
T 2cd8_A          373 FCIGAPLARLEARIAVRALLERCPDLALDVSPGELVWYPNPMIRGLKALPIRWRRGREA  431 (436)
T ss_dssp             CCTTHHHHHHHHHHHHHHHHHSCTTCCBCSCGGGCCBCCCTTBCCBSCCEEC-------
T ss_pred             CCcCHHHHHHHHHHHHHHHHHhCCCceecCCCccceeccCcccCCcceeEEEEecCccc
Confidence            99999999999999999999999 6998632 222222233456777999999999754


No 31 
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=100.00  E-value=2.2e-59  Score=457.57  Aligned_cols=357  Identities=17%  Similarity=0.174  Sum_probs=287.7

Q ss_pred             eeeccCcceEEeCCHHHHHHHHhcCCCCCCCCCchh-hHH--h----hhcCceeccCCccHHHHHhhhccccchhhhhhh
Q 012950            4 LTWYGSRAQLVITQPELIKEILSNSDGTYPKVQAPG-FLR--K----ILGDGLVTAGGENWHRQRKLATLAFYAESLRVT   76 (452)
Q Consensus         4 ~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~~~~~~-~~~--~----~~g~~l~~~~~~~w~~~Rr~~~~~f~~~~l~~~   76 (452)
                      ++++  .+.++++||+++++|+.++ ..|++++... .+.  .    ..+.++++.+|+.|+++||++.++|++++++  
T Consensus        47 ~~~~--~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~h~~~R~~~~~~fs~~~l~--  121 (414)
T 2uuq_A           47 QRPE--YDYYVLSRHADVWSAARDH-QTFSSAQGLTVNYGELEMIGLHDTPPMVMQDPPVHTEFRKLVSRGFTPRQVE--  121 (414)
T ss_dssp             TCGG--GCEEEECSHHHHHHHHHCT-TTEESTTCSSSCTTHHHHHTCSSSCCGGGCCTTHHHHHHHHHHTTSSHHHHH--
T ss_pred             ccCC--CCEEEEcCHHHHHHHHcCc-hhccCCCCcccccCcccccccccccccccCCchhHHHHHHHhhhhcCHHHHH--
Confidence            5555  6899999999999999976 4686654221 111  2    2367888899999999999999999999999  


Q ss_pred             cchhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehh-hhHHHHHHHHHHHhhcCCCccchhhHH
Q 012950           77 KSNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVS-QEFKLLTSEIISRTAFGSSYLEGESIF  155 (452)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~-~~~~~~~~~~i~~~~fG~~~~~~~~~~  155 (452)
                                              .+.+.+.+.+..+++.|..  .+++|+. ++...+++++|+. +||.++++.+.+.
T Consensus       122 ------------------------~~~~~i~~~~~~ll~~l~~--~~~vdl~~~~~~~~~~~vi~~-~~G~~~~~~~~~~  174 (414)
T 2uuq_A          122 ------------------------TVEPTVRKFVVERLEKLRA--NGGGDIVTELFKPLPSMVVAH-YLGVPEEDWTQFD  174 (414)
T ss_dssp             ------------------------HHHHHHHHHHHHHHHHHHH--TTEEEHHHHTTTHHHHHHHHH-HTTCCGGGHHHHH
T ss_pred             ------------------------HHHHHHHHHHHHHHHHHHh--cCCccHHHHHHHHhHHHHHHH-HhCCCHHHHHHHH
Confidence                                    9999999999999999986  3579997 5678999999999 6999887433332


Q ss_pred             HHHHhhHHHHhhhhhhhcc-ccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHhcCCC
Q 012950          156 NKLTNMSFLASRNAYKIKI-PLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKAYHDP  234 (452)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~  234 (452)
                      ........    .   ..+ |..         .+..++.+.+.+++.+.++++++.        ..+|+++.|++...++
T Consensus       175 ~~~~~~~~----~---~~~~p~~---------~~~~~~~~~~~~~~~~~i~~r~~~--------~~~dll~~ll~~~~~~  230 (414)
T 2uuq_A          175 GWTQAIVA----A---NAVDGAT---------TGALDAVGSMMAYFTGLIERRRTE--------PADDAISHLVAAGVGA  230 (414)
T ss_dssp             HHHHHHHH----H---HHC--------------CCHHHHHHHHHHHHHHHHHHTTS--------CCSSHHHHHHHTTTTC
T ss_pred             HHHHHHHh----h---cccCCch---------hHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHhccccc
Confidence            22211111    0   111 210         134456677888888888776542        3579999999875321


Q ss_pred             CCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHHHHHHHHHhhc
Q 012950          235 DMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKTMSMVINESLR  314 (452)
Q Consensus       235 ~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lR  314 (452)
                       .+..++++++++++..+++||+|||+++++|++++|++||++|+++++|+                 +||+|||+|+||
T Consensus       231 -~~~~ls~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~-----------------~~l~a~i~E~lR  292 (414)
T 2uuq_A          231 -DGDTAGTLSILAFTFTMVTGGNDTVTGMLGGSMPLLHRRPDQRRLLLDDP-----------------EGIPDAVEELLR  292 (414)
T ss_dssp             -TTCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCG-----------------GGHHHHHHHHHH
T ss_pred             -CCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHhCH-----------------HHHHHHHHHHHH
Confidence             23468999999999999999999999999999999999999999999985                 599999999999


Q ss_pred             CCCCCCCccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcccccCCCCCCC
Q 012950          315 LYPPAVNISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPFSSGPRIC  394 (452)
Q Consensus       315 l~p~~~~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C  394 (452)
                      ++|+++..+|.+.+|++++||.||||+.|+++.+++||||++||+||++|+||||.           ..++|||.|+|.|
T Consensus       293 l~p~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeR~~-----------~~~~~FG~G~r~C  361 (414)
T 2uuq_A          293 LTSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAELDVTRCP-----------RNILTFSHGAHHC  361 (414)
T ss_dssp             HHCSBCCEEEEESSCEEETTEEECTTCEEEECHHHHTTCHHHHCTTTTSCCTTCCC-----------CSCCTTCSSTTCC
T ss_pred             hCCCcCCcceEECCCEEECCEEECCCCEEEeChhhhCCCHHHhCCCchhcCCCCCC-----------CCCcCCCCCCccC
Confidence            99999977999999999999999999999999999999999999999999999984           2589999999999


Q ss_pred             cchHHHHHHHHHHHHHHHhhc-EEEeCCCCcCCCceeeEeecCCCceEEEEEc
Q 012950          395 VGLNFAATEAKIALSMILQRY-RFNLSPSYVHSPVLVVTLRPQHGLQVIFQPL  446 (452)
Q Consensus       395 ~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r  446 (452)
                      +|++||.+|++++++.|+++| ++++.++ ........++++..+++|.+++|
T Consensus       362 ~G~~lA~~e~~~~la~ll~~f~~~~l~~~-~~~~~~~~~~~~~~~lpv~~~~r  413 (414)
T 2uuq_A          362 LGAAAARMQCRVALTELLARCPDFEVAES-RIVWSGGSYVRRPLSVPFRVTSS  413 (414)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHCCSEEECGG-GCEECCCSSBCCEEECEEEEC--
T ss_pred             CCHHHHHHHHHHHHHHHHHhCcccEECCC-CccccccccccCcceeEEEecCC
Confidence            999999999999999999999 6999743 22222234567778999999886


No 32 
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=100.00  E-value=2.2e-59  Score=468.94  Aligned_cols=404  Identities=16%  Similarity=0.160  Sum_probs=315.3

Q ss_pred             CceeeeccCcceEEeCCHHHHHHHHhcCCCCCCCCC-chhhHHhhhcCcee-ccCCccHHHHHhhhccccchhhhhhhcc
Q 012950            1 MNFLTWYGSRAQLVITQPELIKEILSNSDGTYPKVQ-APGFLRKILGDGLV-TAGGENWHRQRKLATLAFYAESLRVTKS   78 (452)
Q Consensus         1 ~~~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~~~-~~~~~~~~~g~~l~-~~~~~~w~~~Rr~~~~~f~~~~l~~~~~   78 (452)
                      |||++++|+.++++|+||+++++|+.++. .+.... ........+|.+.. ..+|+.|+++|+.+.++|++++++    
T Consensus        48 pv~~~~lg~~~~vvv~~p~~v~~vl~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~Rr~~~~~f~~~~l~----  122 (491)
T 3v8d_A           48 HVFTCKLMGKYVHFITNPLSYHKVLCHGK-YFDWKKFHFALSAKAFGHRSIDPMDGNTTENINDTFIKTLQGHALN----  122 (491)
T ss_dssp             SEEEEEETTEEEEEECCGGGHHHHHSCCT-TEESSHHHHHHHHHHHTCCCCCGGGSSBCCCHHHHHHHHHSHHHHH----
T ss_pred             CceEEEECCEEEEEEcCHHHHHHHHhcCC-ccchHHHHHHHHHHhcCCcccccccchhHHHHHHHHHHHcCccchH----
Confidence            68999999999999999999999997654 343332 22345566775544 457999999999999999999999    


Q ss_pred             hhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhc-----CCceeehhhhHHHHHHHHHHHhhcCCCccchhh
Q 012950           79 NCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHS-----EGKEIEVSQEFKLLTSEIISRTAFGSSYLEGES  153 (452)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~-----~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~~~  153 (452)
                                            .+.+.+.+++..+++.+...     .+...++.+++..+++++++..+||.++...++
T Consensus       123 ----------------------~~~~~i~~~~~~ll~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~fG~~~~~~~~  180 (491)
T 3v8d_A          123 ----------------------SLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMFEAGYLTIFGRDLTRRDT  180 (491)
T ss_dssp             ----------------------HHHHHHHHHHHHHHSCCSSCGGGGCSCEEEEHHHHHHHHHHHHHHHHHHCBCCSCGGG
T ss_pred             ----------------------HHHHHHHHHHHHHHHhhhhcccCCCCCcccCHHHHHHHHHHHHHHHHHcCccccccch
Confidence                                  99999999999999855222     256789999999999999999999998764333


Q ss_pred             HHHHHHhhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHhcCC
Q 012950          154 IFNKLTNMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKAYHD  233 (452)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~  233 (452)
                      ....+.+....+.  .....+|.+..++|....++..++.+.+.+++.+.+.+++    .     ...|+++.++....+
T Consensus       181 ~~~~~~~~~~~~~--~~~~~~~~l~~~~p~~~~~~~~~a~~~l~~~~~~~~~~~~----~-----~~~d~l~~l~~~~~~  249 (491)
T 3v8d_A          181 QKAHILNNLDNFK--QFDKVFPALVAGLPIHMFRTAHNAREKLAESLRHENLQKR----E-----SISELISLRMFLNDT  249 (491)
T ss_dssp             HHHHHHHHHHHHH--HHHHHHHHHHTTCCGGGCHHHHHHHHHHHHHTSHHHHTTC----B-----SCCHHHHHHHHHHHH
T ss_pred             hhhhhHHHHHHHH--HHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHhcc----c-----cccHHHHHHHHHhhc
Confidence            2222222111111  1223334332345555555666666666666555443322    1     457999999876433


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCC-----------CCCChhhcccc
Q 012950          234 PDMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQ-----------KNPAPDGIGKL  302 (452)
Q Consensus       234 ~~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~-----------~~~~~~~~~~l  302 (452)
                      .   ..+++++++.+++.+++||++||+++++|++++|++||++|++|++||++++++           ..++.++++++
T Consensus       250 ~---~~~~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~~l~~~  326 (491)
T 3v8d_A          250 L---STFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDL  326 (491)
T ss_dssp             H---BCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTTCCCCSSSSCCCCCHHHHHCC
T ss_pred             c---CCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHhhccccccccccccccCCHHHHhcC
Confidence            2   358999999999999999999999999999999999999999999999999863           34788999999


Q ss_pred             HHHHHHHHHhhcCCCCCCCccccccceeec----CCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCC-
Q 012950          303 KTMSMVINESLRLYPPAVNISRNVEREVRL----GKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKAS-  377 (452)
Q Consensus       303 p~l~a~i~E~lRl~p~~~~~~r~~~~d~~l----~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~-  377 (452)
                      |||+|||+|+||++| .+..+|.+.+|+++    +||.||||+.|.++.+++||||++| +||++|+|+||++.+.... 
T Consensus       327 ~~l~a~i~E~lRl~p-~~~~~R~~~~d~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~-~~p~~F~p~R~~~~~~~~~~  404 (491)
T 3v8d_A          327 PVLDSIIKESLRLSS-ASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIY-PDPLTFKYDRYLDENGKTKT  404 (491)
T ss_dssp             HHHHHHHHHHHHHHE-EECEEEEESSSEEEECSSCEEEECTTCEEEECTHHHHTCTTTS-SSTTSCCTTTTBCTTSSBCC
T ss_pred             hHHHHHHHHHhhcCC-CCccceeccCCeeEeecCCcEEeCCCCEEEecchhhcCCcccC-CCccccCcccccCCCCCccc
Confidence            999999999999997 45668999999999    9999999999999999999999999 9999999999997643211 


Q ss_pred             ------CCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhcEEEeCCCCcCC------CceeeEeecCCCceEEEEE
Q 012950          378 ------NNTPAAFLPFSSGPRICVGLNFAATEAKIALSMILQRYRFNLSPSYVHS------PVLVVTLRPQHGLQVIFQP  445 (452)
Q Consensus       378 ------~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~------~~~~~~~~p~~~~~v~~~~  445 (452)
                            ...+..|+|||+|+|.|+|++||.+|++++++.|+++|+|++.++....      ....++..|..++.|.++-
T Consensus       405 ~~~~~~~~~~~~~~~FG~G~~~C~G~~lA~~e~~~~l~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~i~v~~~~  484 (491)
T 3v8d_A          405 TFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSYFELELIEGQAKCPPLDQSRAGLGILPPLNDIEFKYKF  484 (491)
T ss_dssp             CCEETTEECSCCCCTTEETTEECTTHHHHHHHHHHHHHHHHHHEEEEEC---CCCCCBCGGGTBEEECCBSSCCEEEEEE
T ss_pred             ccccccccCCCcccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceEEeCCCCCCCCCCCcccCcCcccCCCCCeEEEEEe
Confidence                  0235679999999999999999999999999999999999997652111      1235677888899998875


Q ss_pred             cc
Q 012950          446 LS  447 (452)
Q Consensus       446 r~  447 (452)
                      ..
T Consensus       485 ~~  486 (491)
T 3v8d_A          485 KH  486 (491)
T ss_dssp             CS
T ss_pred             cc
Confidence            44


No 33 
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=100.00  E-value=1.8e-59  Score=461.61  Aligned_cols=371  Identities=18%  Similarity=0.252  Sum_probs=284.1

Q ss_pred             CceeeeccCcceEEeCCHHHHHHHHhcCCCCCCCCCchhhHHhhhcC-ceeccCCccHHHHHhhhccccchhhhhhhcch
Q 012950            1 MNFLTWYGSRAQLVITQPELIKEILSNSDGTYPKVQAPGFLRKILGD-GLVTAGGENWHRQRKLATLAFYAESLRVTKSN   79 (452)
Q Consensus         1 ~~~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~~~~~~~~~~~~g~-~l~~~~~~~w~~~Rr~~~~~f~~~~l~~~~~~   79 (452)
                      |||++..++  .++|++|+.+++|+.++. .|++..........+|. ++++.+|+.|+++||++.++|+++.++     
T Consensus        67 pv~~~~~~~--~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~~~~l~~~dg~~h~~~Rr~~~~~fs~~~l~-----  138 (441)
T 3nc3_A           67 PVHYEESID--SYFISRYHDVRYILQHPD-IFTTKSLVERAEPVMRGPVLAQMHGKEHSAKRRIVVRSFIGDALD-----  138 (441)
T ss_dssp             SEEEETTTT--EEEECCHHHHHHHHHCTT-TEECCCTTSCCCCSCC-------------CCHHHHHHHHHHTHHH-----
T ss_pred             CEEEeCCCC--EEEEcCHHHHHHHhcCcc-cccccccccccccccCCCccccCCcHHHHHHHHHHHhhcCHHHHH-----
Confidence            567776655  899999999999998765 58655432223334454 588889999999999999999999999     


Q ss_pred             hhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhH-HHHHHHHHHHhhcCCCccchhhHHHHH
Q 012950           80 CLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEF-KLLTSEIISRTAFGSSYLEGESIFNKL  158 (452)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~  158 (452)
                                           .+.+.+.+.+.++++.|..  .+++|+...+ ..+++++++. +||.+..+.+.+....
T Consensus       139 ---------------------~~~~~i~~~~~~ll~~l~~--~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~~~~~~~~~  194 (441)
T 3nc3_A          139 ---------------------HLSPLIKQNAENLLAPYLE--RGKSDLVNDFGKTFAVCVTMD-MLGLDKRDHEKISEWH  194 (441)
T ss_dssp             ---------------------HHHHHHHHHHHHHHTTTTT--TTEEECCCCCHHHHHHHHHHH-HTTCCGGGHHHHHHHH
T ss_pred             ---------------------HHHHHHHHHHHHHHHHHHh--cCCCcHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHH
Confidence                                 9999999999999999975  5789985555 5689999998 5898776544333322


Q ss_pred             HhhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHhcCCCCCCC
Q 012950          159 TNMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKAYHDPDMTK  238 (452)
Q Consensus       159 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~  238 (452)
                      ..+.....    ....       +........+..+.+.+++.+.+++++..        ..+|+++.|++...+   +.
T Consensus       195 ~~~~~~~~----~~~~-------~~~~~~~~~~~~~~l~~~~~~~i~~rr~~--------~~~Dll~~Ll~~~~~---~~  252 (441)
T 3nc3_A          195 SGVADFIT----SISQ-------SPEARAHSLWCSEQLSQYLMPVIKERRVN--------PGSDLISILCTSEYE---GM  252 (441)
T ss_dssp             HHHHHHHH----CSCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHTTS--------CCSSHHHHHCC---------
T ss_pred             HHHHHhcc----cccC-------ChHHHHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHHhhcc---CC
Confidence            22221111    0001       11113345566778888888888877541        457999999986542   34


Q ss_pred             CCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHHHHHHHHHhhcCCCC
Q 012950          239 RISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKTMSMVINESLRLYPP  318 (452)
Q Consensus       239 ~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~  318 (452)
                      .++++++++++..+++||+|||+++++|++++|++||++|+++++|                 ++||++||+|+||++|+
T Consensus       253 ~ls~~el~~~~~~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E-----------------~~~l~a~i~E~LRl~pp  315 (441)
T 3nc3_A          253 ALSDKDILALILNVLLAATEPADKTLALMIYHLLNNPEQMNDVLAD-----------------RSLVPRAIAETLRYKPP  315 (441)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHC-----------------GGGHHHHHHHHHHHSCS
T ss_pred             CCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhC-----------------HHHHHHHHHHhhhcCCc
Confidence            6999999999999999999999999999999999999999999998                 47999999999999999


Q ss_pred             CCCccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcccccCCCCCCCcchH
Q 012950          319 AVNISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPFSSGPRICVGLN  398 (452)
Q Consensus       319 ~~~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~  398 (452)
                      ++.++|.+.+|++++||.||||+.|+++.+++||||++| +||++|+||||+.+..... .....++|||.|+|.|+|++
T Consensus       316 ~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f-~dP~~F~PeR~~~~~~~~~-~~~~~~l~FG~G~r~C~G~~  393 (441)
T 3nc3_A          316 VQLIPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAF-EQPDVFNIHREDLGIKSAF-SGAARHLAFGSGIHNCVGTA  393 (441)
T ss_dssp             BCEEEEEESSCEESSSCEECTTCEEEEEHHHHHTCTTTS-SSTTSCCTTCTTSCGGGTT-SSSCSSCTTCCGGGCCTTHH
T ss_pred             ccCccEEECCCEEECCEEECCCCEEEechHHhcCChhhC-CCcccCCCCCCCccccccc-CCCCCcccCCCCCccCCCHH
Confidence            998899999999999999999999999999999999999 9999999999986543322 23568999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhc-EEEeCCCCcCCCceeeEeecCCCceEEEEE
Q 012950          399 FAATEAKIALSMILQRY-RFNLSPSYVHSPVLVVTLRPQHGLQVIFQP  445 (452)
Q Consensus       399 ~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~  445 (452)
                      ||.+|++++++.|+++| +|++.++. .......++++...++|+|+|
T Consensus       394 lA~~e~~~~l~~ll~~f~~~~l~~~~-~~~~~~~~~~~~~~lpv~~~~  440 (441)
T 3nc3_A          394 FAKNEIEIVANIVLDKMRNIRLEEDF-CYAESGLYTRGPVSLLVAFDG  440 (441)
T ss_dssp             HHHHHHHHHHHHHHHHSTTCEECTTC-CCCEECSSBCEESCCEEECC-
T ss_pred             HHHHHHHHHHHHHHHhCcccEECCCC-cccccCccccCcceeEEEEec
Confidence            99999999999999999 99998652 223334556777789998864


No 34 
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=100.00  E-value=1.6e-58  Score=449.77  Aligned_cols=361  Identities=16%  Similarity=0.168  Sum_probs=292.4

Q ss_pred             CceeeeccCcceEEeCCHHHHHHHHhcCCCCCCCCCchhhHHhhhcCceeccCCccHHHHHhhhccccchhhhhhhcchh
Q 012950            1 MNFLTWYGSRAQLVITQPELIKEILSNSDGTYPKVQAPGFLRKILGDGLVTAGGENWHRQRKLATLAFYAESLRVTKSNC   80 (452)
Q Consensus         1 ~~~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~~~~~~~~~~~~g~~l~~~~~~~w~~~Rr~~~~~f~~~~l~~~~~~~   80 (452)
                      |||++  +. ++++++||+++++|+.++. .|++++... .....+.++++.+|+.|+++||++.++|++++++      
T Consensus        32 pv~~~--~~-~~vvv~~~~~v~~vl~~~~-~f~~~~~~~-~~~~~~~~l~~~~g~~h~~~R~~~~~~fs~~~l~------  100 (398)
T 2xkr_A           32 PVFRD--RN-GLAAASTYQAVIDAERQPE-LFSNAGGIR-PDQPALPMMIDMDDPAHLLRRKLVNAGFTRKRVK------  100 (398)
T ss_dssp             SEEEC--TT-CCEEECSHHHHHHHHTCTT-TEESTTCSS-TTSCCCSSGGGCCTTHHHHHHHHHGGGSCHHHHH------
T ss_pred             Ceeec--CC-CeEEEecHHHHHHHHhCcc-cccCccccC-CcccccccccccCchHHHHHHHHhhhhhCHHHHH------
Confidence            45544  33 7999999999999998754 686554322 2223457788899999999999999999999999      


Q ss_pred             hhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehh-hhHHHHHHHHHHHhhcCCCccchhhHHHHHH
Q 012950           81 LMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVS-QEFKLLTSEIISRTAFGSSYLEGESIFNKLT  159 (452)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~-~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~  159 (452)
                                          .+.+.+.+.+..+++.|..  .+++|+. .+...+++++|+.+ ||.++++.+++.....
T Consensus       101 --------------------~~~~~i~~~~~~l~~~l~~--~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~~~~~~~~~~  157 (398)
T 2xkr_A          101 --------------------DKEASIAALCDTLIDAVCE--RGECDFVRDLAAPLPMAVIGDM-LGVRPEQRDMFLRWSD  157 (398)
T ss_dssp             --------------------TTHHHHHHHHHHHHHTTTT--TSEEEHHHHTTTHHHHHHHHHH-HTCCGGGHHHHHHHHH
T ss_pred             --------------------HHHHHHHHHHHHHHHhhhh--cCCccHHHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHH
Confidence                                9999999999999999976  4589999 55568999999999 9998764433332222


Q ss_pred             hhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHhcCCCCCCCC
Q 012950          160 NMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKAYHDPDMTKR  239 (452)
Q Consensus       160 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~  239 (452)
                      .+.    ..    ..|.   ++| ...++..++.+.+.+++.+.++++++.        ...|+++.|++...+   +..
T Consensus       158 ~~~----~~----~~~~---~~p-~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~dll~~ll~~~~~---~~~  214 (398)
T 2xkr_A          158 DLV----TF----LSSH---VSQ-EDFQITMDAFAAYNDFTRATIAARRAD--------PTDDLVSVLVSSEVD---GER  214 (398)
T ss_dssp             HHH----HH----HTSC---CCH-HHHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHHCCBT---TBC
T ss_pred             HHH----hc----cCcc---cch-hhHHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHHhhcc---CCC
Confidence            111    11    1121   122 123355567778888888888887652        457999999987532   346


Q ss_pred             CCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHHHHHHHHHhhcCCCCC
Q 012950          240 ISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKTMSMVINESLRLYPPA  319 (452)
Q Consensus       240 l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~  319 (452)
                      ++++++++++..+++||+|||+++++|++++|++||++|+++++|++                 ||+|||+|+||++|++
T Consensus       215 ls~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~-----------------~l~a~i~E~lRl~p~~  277 (398)
T 2xkr_A          215 LSDDELVMETLLILIGGDETTRHTLSGGTEQLLRNRDQWDLLQRDPS-----------------LLPGAIEEMLRWTAPV  277 (398)
T ss_dssp             CCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHSHHHHHHHHHCGG-----------------GHHHHHHHHHHHHCSB
T ss_pred             CCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHCHHHHHHHHhCHH-----------------HHHHHHHHHHhhcccc
Confidence            99999999999999999999999999999999999999999999963                 8999999999999999


Q ss_pred             CCccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcccccCCCCCCCcchHH
Q 012950          320 VNISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPFSSGPRICVGLNF  399 (452)
Q Consensus       320 ~~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~  399 (452)
                      +..+|.+.+|++++||.||||+.|+++.+++||||++| +||++|+||||..           .++|||.|+|.|+|++|
T Consensus       278 ~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~~-----------~~l~FG~G~r~C~G~~l  345 (398)
T 2xkr_A          278 KNMCRVLTADTEFHGTALCAGEKMMLLFESANFDEAVF-CEPEKFDVQRNPN-----------SHLAFGFGTHFCLGNQL  345 (398)
T ss_dssp             CEEEEEESSCEEETTEEECTTCEEEEEHHHHHTCTTTS-SSTTSCCTTCSSC-----------CCCTTCCSTTCCTTHHH
T ss_pred             cCcceEECCCeeECCEEECCCCEEEeChhhhcCChhhC-CCCCeeCCCCCCC-----------CCCcCCCCCcCCcCHHH
Confidence            98899999999999999999999999999999999999 9999999999841           38999999999999999


Q ss_pred             HHHHHHHHHHHHHhhc-EEEeCCCCcCC-CceeeEeecCCCceEEEEEcc
Q 012950          400 AATEAKIALSMILQRY-RFNLSPSYVHS-PVLVVTLRPQHGLQVIFQPLS  447 (452)
Q Consensus       400 a~~~~~~~l~~ll~~f-~~~~~~~~~~~-~~~~~~~~p~~~~~v~~~~r~  447 (452)
                      |.+|++++++.|+++| ++++.++.... ......+++..+++|.++++.
T Consensus       346 A~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~lpv~~~p~~  395 (398)
T 2xkr_A          346 ARLELSLMTERVLRRLPDLRLVADDSVLPLRPANFVSGLESMPVVFTPSP  395 (398)
T ss_dssp             HHHHHHHHHHHHHHHSTTCEESCTTCCCCBCCCSSBCCBSCCEEECCCCC
T ss_pred             HHHHHHHHHHHHHHhCCCceECCCcceecccCcccccCccceeEEecCCC
Confidence            9999999999999999 59997542221 022344566678999998875


No 35 
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=100.00  E-value=2.6e-59  Score=458.56  Aligned_cols=366  Identities=20%  Similarity=0.255  Sum_probs=286.7

Q ss_pred             Cceeeecc--CcceEEeCCHHHHHHHHhcCCCCCCCCCc---------hhh-------HHhhhcCceeccCCccHHHHHh
Q 012950            1 MNFLTWYG--SRAQLVITQPELIKEILSNSDGTYPKVQA---------PGF-------LRKILGDGLVTAGGENWHRQRK   62 (452)
Q Consensus         1 ~~~~~~~g--~~~~vvv~~p~~~~~il~~~~~~f~~~~~---------~~~-------~~~~~g~~l~~~~~~~w~~~Rr   62 (452)
                      |||++++|  +.++++++||+.+++|+.++  .|++++.         ...       +....|.++++.+|+.|+++||
T Consensus        34 pv~~~~~g~~~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~  111 (425)
T 2z3t_A           34 PVHRTASGPGKPDTYYVFTYDDVVRVLSNR--RLGRNARVASGDTDTAPVPIPTEHRALRTVVENWLVFLDPPHHTELRS  111 (425)
T ss_dssp             SEEEECCCSSCCCEEEECSHHHHHHHHHCT--TEESSCCCC---------------CHHHHHHTTCGGGCCHHHHHHHHH
T ss_pred             CeEeccccCCCCCeEEEcCHHHHHHHHcCC--CccccccccccccccccccccccccccccccccccccCCchHHHHHHH
Confidence            68899988  78899999999999999874  6755431         111       1223347888999999999999


Q ss_pred             hhccccchhhhhhhcchhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhh-HHHHHHHHHHH
Q 012950           63 LATLAFYAESLRVTKSNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQE-FKLLTSEIISR  141 (452)
Q Consensus        63 ~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~-~~~~~~~~i~~  141 (452)
                      ++.++|++++++                          .+.+.+.+.+..+++.|..  .+++|+... ...+++++|+.
T Consensus       112 ~~~~~fs~~~l~--------------------------~~~~~i~~~~~~ll~~l~~--~g~~dl~~~~~~~~~~~vi~~  163 (425)
T 2z3t_A          112 LLTTEFSPSIVT--------------------------GLRPRIAELASALLDRLRA--QRRPDLVEGFAAPLPILVISA  163 (425)
T ss_dssp             HHHGGGSHHHHH--------------------------HHHHHHHHHHHHHHHHHTT--SSSCBHHHHTTTHHHHHHHHH
T ss_pred             HHHHhhCHHHHH--------------------------HHHHHHHHHHHHHHHHHHh--cCCccHHHHHHHHHHHHHHHH
Confidence            999999999999                          9999999999999999976  348999875 47899999999


Q ss_pred             hhcCCCccchhhHHHHHHhhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC
Q 012950          142 TAFGSSYLEGESIFNKLTNMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGN  221 (452)
Q Consensus       142 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  221 (452)
                      + ||.++++.+.+..    +...+...  ...+|     ++....++..++.+.+.+++.+.++++++.        ..+
T Consensus       164 ~-~G~~~~~~~~~~~----~~~~~~~~--~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~  223 (425)
T 2z3t_A          164 L-LGIPEEDHTWLRA----NAVALQEA--STTRA-----RDGRGYARAEAASQEFTRYFRREVDRRGGD--------DRD  223 (425)
T ss_dssp             H-HTCCGGGHHHHHH----HHHHHHTT--CTTCC-----C---HHHHHHHHHHHHHHHHHHHHCC---------------
T ss_pred             H-hCCCHHHHHHHHH----HHHHHHhh--ccccC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHhC--------CCC
Confidence            8 9998764333222    11111110  01111     111223455666777888888888776642        347


Q ss_pred             cHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccc
Q 012950          222 DYFGLLLKAYHDPDMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGK  301 (452)
Q Consensus       222 d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~  301 (452)
                      |+++.|++...+   +..++++++++++..+++||+|||+++++|++++|++||++|+++++|+                
T Consensus       224 dll~~ll~~~~~---~~~ls~~el~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~----------------  284 (425)
T 2z3t_A          224 DLLTLLVRARDT---GSPLSVDGIVGTCVHLLTAGHETTTNFLAKAVLTLRAHRDVLDELRTTP----------------  284 (425)
T ss_dssp             CHHHHHHHHHHT---TCCCCHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHCHHHHHHHHHCG----------------
T ss_pred             CHHHHHHHhhcc---CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCh----------------
Confidence            999999986432   3468999999999999999999999999999999999999999999995                


Q ss_pred             cHHHHHHHHHhhcCCCCCCCccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCC
Q 012950          302 LKTMSMVINESLRLYPPAVNISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTP  381 (452)
Q Consensus       302 lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~  381 (452)
                       .||+|||+|+||++|+++..+|++.+|++++||.||||+.|+++.+++||||++| +||++|+||||.           
T Consensus       285 -~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------  351 (425)
T 2z3t_A          285 -ESTPAAVEELMRYDPPVQAVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARF-PDPDVLDVHRAA-----------  351 (425)
T ss_dssp             -GGHHHHHHHHHHHSCSBCEEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTS-SSTTSCCTTSCS-----------
T ss_pred             -HhHHHHHHHHHHhCCcccCcceEeCCCeeECCEEECCCCEEEeChhhhCCCcccc-CCcccCCCCCCC-----------
Confidence             3899999999999999997799999999999999999999999999999999999 999999999995           


Q ss_pred             CcccccCCCCCCCcchHHHHHHHHHHHHHHHhhc-EEEeCCCCcCCCceeeEeecCCCceEEEEEcccc
Q 012950          382 AAFLPFSSGPRICVGLNFAATEAKIALSMILQRY-RFNLSPSYVHSPVLVVTLRPQHGLQVIFQPLSVN  449 (452)
Q Consensus       382 ~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r~~~  449 (452)
                      ..++|||.|+|.|+|++||.+|++++++.|+++| +|+ .++.........++++..+++|++++.+..
T Consensus       352 ~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~-~~~~~~~~~~~~~~~~~~~lpv~~~~~~~~  419 (425)
T 2z3t_A          352 ERQVGFGLGIHYCLGATLARAEAEIGLRALLDGIPALG-RGAHEVEYADDMVFHGPTRLLLDLPDAALE  419 (425)
T ss_dssp             SCCCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCGGGG-SSCEEEEECSCSSBCCEEEEEECCC-----
T ss_pred             CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCcCc-cCCCccccccccccCCcceeeEEecchhhh
Confidence            2589999999999999999999999999999999 899 754311112234456667888888877643


No 36 
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=100.00  E-value=1.9e-58  Score=449.68  Aligned_cols=359  Identities=18%  Similarity=0.255  Sum_probs=293.3

Q ss_pred             Cceeeec-cCcceEEeCCHHHHHHHHhcCCCCCCCCC---c-hh--hHHh-hhcCceeccCCccHHHHHhhhccccchhh
Q 012950            1 MNFLTWY-GSRAQLVITQPELIKEILSNSDGTYPKVQ---A-PG--FLRK-ILGDGLVTAGGENWHRQRKLATLAFYAES   72 (452)
Q Consensus         1 ~~~~~~~-g~~~~vvv~~p~~~~~il~~~~~~f~~~~---~-~~--~~~~-~~g~~l~~~~~~~w~~~Rr~~~~~f~~~~   72 (452)
                      |||++++ |+.+.++++||+++++|+.++  .|+++.   . ..  .+.. ..+.++++.+|+.|+++||+++++|++++
T Consensus        33 pv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~h~~~R~~~~~~fs~~~  110 (403)
T 3aba_A           33 PVTRATFTSGHEAWLVTGYEEVRALLRDS--SFSVQVPHALHTQDGVVTQKPGRGSLLWQDEPEHTSDRKLLAKEFTVRR  110 (403)
T ss_dssp             SEEEEECTTSCEEEEECCHHHHHHHHHCT--TEESCCSCCTTSSSCCCCCCCCTTCCTTCCTTHHHHHHHHHHHHSCHHH
T ss_pred             CeeeeccCCCceEEEEcCHHHHHHHHcCC--CcccccccccccccccccccccccccccCCchhHHHHHHHHHhhcCHHH
Confidence            6899997 899999999999999999874  465542   1 11  1112 13567888899999999999999999999


Q ss_pred             hhhhcchhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhH-HHHHHHHHHHhhcCCCccch
Q 012950           73 LRVTKSNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEF-KLLTSEIISRTAFGSSYLEG  151 (452)
Q Consensus        73 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~~~~  151 (452)
                      ++                          .+.+.+.+.++.+++.|.+ .++++|+...+ ..+++++|+. +||.++++.
T Consensus       111 l~--------------------------~~~~~i~~~~~~ll~~l~~-~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~  162 (403)
T 3aba_A          111 MQ--------------------------ALRPNIQRIVDEHLDAIEA-RGGPVDLVKTFANAVPSMVISD-LFGVPVERR  162 (403)
T ss_dssp             HH--------------------------TTHHHHHHHHHHHHHHHHH-HCSCEEHHHHTTTHHHHHHHHH-HHTCCGGGH
T ss_pred             HH--------------------------HHHHHHHHHHHHHHHHHHh-cCCCccHHHHHHHHHHHHHHHH-HcCCCHHHH
Confidence            99                          9999999999999999984 25789998766 4699999998 699887643


Q ss_pred             hhHHHHHHhhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHhc
Q 012950          152 ESIFNKLTNMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKAY  231 (452)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~  231 (452)
                      +.+..    +...+        +...   .+   .++..++.+.+.+++.+.++++++.        ..+|+++.|++..
T Consensus       163 ~~~~~----~~~~~--------~~~~---~~---p~~~~~~~~~~~~~~~~~i~~r~~~--------~~~dll~~ll~~~  216 (403)
T 3aba_A          163 AEFQD----IAEAM--------MRVD---QD---AAATEAAGMRLGGLLYQLVQERRAN--------PGDDLISALITTE  216 (403)
T ss_dssp             HHHHH----HHHHH--------SBSS---SC---HHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHTSC
T ss_pred             HHHHH----HHHHH--------Hhcc---Cc---HHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHhhc
Confidence            22221    11111        0000   00   1455667778888888888887652        3469999999864


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHHHHHHHHH
Q 012950          232 HDPDMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKTMSMVINE  311 (452)
Q Consensus       232 ~~~~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E  311 (452)
                      .+   +..++++++++++..+++||+|||+++++|++++|++||++|++|++|+                 .||+|||+|
T Consensus       217 ~~---~~~l~~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~-----------------~~l~a~i~E  276 (403)
T 3aba_A          217 DP---DGVVDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDSPDQLALLREDP-----------------SLVGNAVEE  276 (403)
T ss_dssp             CT---TCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCG-----------------GGHHHHHHH
T ss_pred             cC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhCH-----------------HHHHHHHHH
Confidence            32   3469999999999999999999999999999999999999999999984                 489999999


Q ss_pred             hhcCCCCCC-CccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcccccCCC
Q 012950          312 SLRLYPPAV-NISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPFSSG  390 (452)
Q Consensus       312 ~lRl~p~~~-~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G  390 (452)
                      +||++|+++ ..+|.+.+|++++||.||||+.|+++.+++||||++| +||++|+||||.           ..++|||.|
T Consensus       277 ~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dp~~F~PeR~~-----------~~~l~FG~G  344 (403)
T 3aba_A          277 LLRYLTIGQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFV-EEPERFDITRRP-----------APHLAFGFG  344 (403)
T ss_dssp             HHHHHCSCTTCEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTSCC-----------CCCSTTCCG
T ss_pred             HHhcCCCcccccceEeCCCeEECCEEECCCCEEEechhhhCCChhhC-CCccccCCCCCC-----------CCccCCCCC
Confidence            999999999 6799999999999999999999999999999999999 999999999983           258999999


Q ss_pred             CCCCcchHHHHHHHHHHHHHHHhhc-EEEeCCCC-cCCCceeeEeecCCCceEEEEEcc
Q 012950          391 PRICVGLNFAATEAKIALSMILQRY-RFNLSPSY-VHSPVLVVTLRPQHGLQVIFQPLS  447 (452)
Q Consensus       391 ~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~-~~~~~~~~~~~p~~~~~v~~~~r~  447 (452)
                      +|.|+|++||.+|++++++.|+++| ++++.++. ........++++..+++|++++|+
T Consensus       345 ~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~~~r~  403 (403)
T 3aba_A          345 AHQCIGQQLARIELQIVFETLFRRLPGLRLAKPVEELRFRHDMVFYGVHELPVTWHHHH  403 (403)
T ss_dssp             GGSCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGGGSCBCTTBSSCCBSCCEEECCCCC
T ss_pred             CccCcCHHHHHHHHHHHHHHHHHhCCCceecCCccccccccCcccCCcceeEEEecCCC
Confidence            9999999999999999999999999 69987531 221222345677889999998874


No 37 
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00  E-value=6e-59  Score=454.22  Aligned_cols=361  Identities=19%  Similarity=0.258  Sum_probs=293.3

Q ss_pred             Cceeeec-cCcceEEeCCHHHHHHHHhcCCCCCCCCC--chhh-----------HHhhh-cCceeccCCccHHHHHhhhc
Q 012950            1 MNFLTWY-GSRAQLVITQPELIKEILSNSDGTYPKVQ--APGF-----------LRKIL-GDGLVTAGGENWHRQRKLAT   65 (452)
Q Consensus         1 ~~~~~~~-g~~~~vvv~~p~~~~~il~~~~~~f~~~~--~~~~-----------~~~~~-g~~l~~~~~~~w~~~Rr~~~   65 (452)
                      |||++++ |+.++++++||+++++|+.++.  ++++.  +...           +.... +.++++.+|+.|+++||++.
T Consensus        31 pv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~h~~~R~~~~  108 (411)
T 1gwi_A           31 PLAAVELPGGVPVWAVTHHAEAKALLTDPR--LVKDINVWGAWRRGEIPADWPLIGLANPGRSMLTVDGAEHRRLRTLVA  108 (411)
T ss_dssp             SEEEEEETTTEEEEEECSHHHHHHHHTCTT--EECCGGGCHHHHTTCSCTTCTTHHHHSCCSSGGGCCHHHHHHHHHHHT
T ss_pred             CeeeeecCCCccEEEEeCHHHHHHHHcCCc--cccCcccccccccccCCcccchhhhhccccccccCCcHHHHHHHHHHH
Confidence            6899998 8899999999999999998754  44433  1110           00012 56788889999999999999


Q ss_pred             cccchhhhhhhcchhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhHH-HHHHHHHHHhhc
Q 012950           66 LAFYAESLRVTKSNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEFK-LLTSEIISRTAF  144 (452)
Q Consensus        66 ~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~~-~~~~~~i~~~~f  144 (452)
                      ++|++++++                          .+.+.+.+.++.+++.|.. .++++|+...+. .+++++|+. +|
T Consensus       109 ~~fs~~~l~--------------------------~~~~~i~~~~~~l~~~l~~-~~~~~d~~~~~~~~~~~~vi~~-~~  160 (411)
T 1gwi_A          109 QALTVRRVE--------------------------HMRGRITELTDRLLDELPA-DGGVVDLKAAFAYPLPMYVVAD-LM  160 (411)
T ss_dssp             TTSCHHHHH--------------------------TTHHHHHHHHHHHHHTSCC-SCCCEEHHHHTTTHHHHHHHHH-HH
T ss_pred             HhcCHHHHH--------------------------HHHHHHHHHHHHHHHHHHH-cCCCcchHHHHhhHHHHHHHHH-Hh
Confidence            999999999                          9999999999999999973 357899998876 599999996 69


Q ss_pred             CCCccchhhHHHHHHhhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHH
Q 012950          145 GSSYLEGESIFNKLTNMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYF  224 (452)
Q Consensus       145 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l  224 (452)
                      |.+.++.+.+......    +..       ..       ....+..++.+.+.+++.+.++++++.        ..+|++
T Consensus       161 G~~~~~~~~~~~~~~~----~~~-------~~-------~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~d~l  214 (411)
T 1gwi_A          161 GIEEARLPRLKVLFEK----FFS-------TQ-------TPPEEVVATLTELASIMTDTVAAKRAA--------PGDDLT  214 (411)
T ss_dssp             TCCGGGHHHHHHHHHH----HHC-------TT-------SCHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHH
T ss_pred             CCCHHHHHHHHHHHHH----Hhc-------cC-------CChHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHH
Confidence            9877543332222111    100       00       112345667778888888888877652        347999


Q ss_pred             HHHHHhcCCCCCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHH
Q 012950          225 GLLLKAYHDPDMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKT  304 (452)
Q Consensus       225 ~~ll~~~~~~~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~  304 (452)
                      +.|++...+   +..++++++++++..+++||+|||+++++|++++|++||++|++|++|+                 +|
T Consensus       215 ~~ll~~~~~---~~~l~~~~i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~-----------------~~  274 (411)
T 1gwi_A          215 SALIQASEN---GDHLTDAEIVSTLQLMVAAGHETTISLIVNAVVNLSTHPEQRALVLSGE-----------------AE  274 (411)
T ss_dssp             HHHHHCCBT---TBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTS-----------------SC
T ss_pred             HHHHHhccc---CCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhChHHHHHHHcCh-----------------HH
Confidence            999987432   3469999999999999999999999999999999999999999999873                 47


Q ss_pred             HHHHHHHhhcCCCCCCC-ccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCc
Q 012950          305 MSMVINESLRLYPPAVN-ISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAA  383 (452)
Q Consensus       305 l~a~i~E~lRl~p~~~~-~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~  383 (452)
                      |+|||+|+||++|+++. .+|++.+|++++||.||||+.|+++.+++||||++||+||++|+||||.+          ..
T Consensus       275 l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeRf~~----------~~  344 (411)
T 1gwi_A          275 WSAVVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERAHGPTADRFDLTRTSG----------NR  344 (411)
T ss_dssp             HHHHHHHHHHHSCSBCCEEEEEESSCEEETTEEECTTCEEEECHHHHTTCHHHHCGGGGSCCTTCCCS----------SC
T ss_pred             HHHHHHHHHHhCCcccCCceeeeCCCeEECCEEECCCCEEEecHHHhcCChhhcCCChhhcCCCCCCC----------CC
Confidence            99999999999999986 69999999999999999999999999999999999999999999999952          36


Q ss_pred             ccccCCCCCCCcchHHHHHHHHHHHHHHHhhc-EEEeCCC-CcCCCceeeEeecCCCceEEEEEcc
Q 012950          384 FLPFSSGPRICVGLNFAATEAKIALSMILQRY-RFNLSPS-YVHSPVLVVTLRPQHGLQVIFQPLS  447 (452)
Q Consensus       384 ~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~p~~~~~v~~~~r~  447 (452)
                      ++|||.|+|.|+|++||.+|++++++.|+++| ++++..+ .........++++..+++|.|++|+
T Consensus       345 ~lpFG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~lpv~~~~r~  410 (411)
T 1gwi_A          345 HISFGHGPHVCPGAALSRMEAGVALPALYARFPHLDLAVPAAELRNKPVVTQNDLFELPVRLAHHH  410 (411)
T ss_dssp             CCTTCCSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCSCTTBCCBSCCEEESSCC-
T ss_pred             cccCCCCcccCCCHHHHHHHHHHHHHHHHHhCccceeCCCcccccccccccccCcceeEEEecCCC
Confidence            89999999999999999999999999999999 7998643 1222222345677789999998874


No 38 
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=100.00  E-value=1.6e-58  Score=452.61  Aligned_cols=363  Identities=19%  Similarity=0.241  Sum_probs=293.6

Q ss_pred             CceeeeccCcceEEeCCHHHHHHHHhcCCCCCCCCCc-----hh-h--HHhh--h-cCceeccCCccHHHHHhhhccccc
Q 012950            1 MNFLTWYGSRAQLVITQPELIKEILSNSDGTYPKVQA-----PG-F--LRKI--L-GDGLVTAGGENWHRQRKLATLAFY   69 (452)
Q Consensus         1 ~~~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~~~~-----~~-~--~~~~--~-g~~l~~~~~~~w~~~Rr~~~~~f~   69 (452)
                      |||+ + ++.++++++||+++++|+.++.  |++++.     .. .  ...+  + +.++++.+|+.|+++||++.++|+
T Consensus        40 pv~~-~-~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~h~~~R~~~~~~fs  115 (419)
T 1q5d_A           40 PIFY-W-DEGRSWVLTRYHDVSAVFRDER--FAVSREEWESSAEYSSAIPELSDMKKYGLFGLPPEDHARVRKLVNPSFT  115 (419)
T ss_dssp             SEEE-E-TTTTEEEECSHHHHHHHHTCTT--EECCGGGSTTHHHHHHSSGGGHHHHHHSTTTSCHHHHHHHHHHHGGGGS
T ss_pred             Cccc-c-CCCCEEEEecHHHHHHHHcCCC--ccccccccccccccccccchhhhhcccccccCCchHHHHHHHHHHHhcC
Confidence            5777 5 6789999999999999998764  866541     11 1  1122  2 567888899999999999999999


Q ss_pred             hhhhhhhcchhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhh-HHHHHHHHHHHhhcCCCc
Q 012950           70 AESLRVTKSNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQE-FKLLTSEIISRTAFGSSY  148 (452)
Q Consensus        70 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~-~~~~~~~~i~~~~fG~~~  148 (452)
                      +++++                          .+.+.+.+++..+++.|..  .+++|+... ...+++++|+.+ ||.++
T Consensus       116 ~~~l~--------------------------~~~~~i~~~~~~ll~~l~~--~~~~d~~~~~~~~~~~~vi~~~-fG~~~  166 (419)
T 1q5d_A          116 SRAID--------------------------LLRAEIQRTVDQLLDARSG--QEEFDVVRDYAEGIPMRAISAL-LKVPA  166 (419)
T ss_dssp             HHHHG--------------------------GGHHHHHHHHHHHHHHHTT--SSCEETTTTTGGGSHHHHHHHH-TTCCG
T ss_pred             HHHHH--------------------------HHHHHHHHHHHHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHH-hCCCH
Confidence            99999                          9999999999999999976  358999865 489999999998 99987


Q ss_pred             cchhhHHHHHHhhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC-cHHHHH
Q 012950          149 LEGESIFNKLTNMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGN-DYFGLL  227 (452)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-d~l~~l  227 (452)
                      ++.+.+......+..    ......+|+.    + ...++..+..+.+.+++.+.++++++.        ..+ |+++.|
T Consensus       167 ~~~~~~~~~~~~~~~----~~~~~~~P~~----~-~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~~dll~~l  229 (419)
T 1q5d_A          167 ECDEKFRRFGSATAR----ALGVGLVPRV----D-EETKTLVASVTEGLALLHGVLDERRRN--------PLENDVLTML  229 (419)
T ss_dssp             GGHHHHHHHHHHHHH----HTTTTTSSCC----C-SCHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSCHHHHH
T ss_pred             HHHHHHHHHHHHHHH----hcccccccCC----h-HHHHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCCHHHHH
Confidence            654333332222211    1111112211    1 223456677778888888888887652        345 999999


Q ss_pred             HHhcCCCCCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHHHHH
Q 012950          228 LKAYHDPDMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKTMSM  307 (452)
Q Consensus       228 l~~~~~~~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a  307 (452)
                      ++...+   +..++++++++++..+++||+|||+++++|++++|++||++|++|++|+                 .||+|
T Consensus       230 l~~~~~---~~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~-----------------~~l~a  289 (419)
T 1q5d_A          230 LQAEAD---GSRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAEP-----------------GLMRN  289 (419)
T ss_dssp             HHHHHS---STTCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCG-----------------GGHHH
T ss_pred             Hhhhcc---CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCH-----------------HHHHH
Confidence            987432   3469999999999999999999999999999999999999999999993                 48999


Q ss_pred             HHHHhhcCCCCCC-CccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcccc
Q 012950          308 VINESLRLYPPAV-NISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLP  386 (452)
Q Consensus       308 ~i~E~lRl~p~~~-~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~  386 (452)
                      ||+|+||++|+++ ..+|++.+|++++||.||||+.|+++.+++||||++| +||++|+||||  +         ..++|
T Consensus       290 ~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~--~---------~~~l~  357 (419)
T 1q5d_A          290 ALDEVLRFDNILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVF-SRPDVFDVRRD--T---------SASLA  357 (419)
T ss_dssp             HHHHHHHHSCSBSSEEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTS-SSTTSCCTTSC--C---------TTCCT
T ss_pred             HHHHHHHhCCccccccceeeCCCeEECCEEECCCCEEEecHHHhcCChhhC-CChhhcCCCCC--C---------CCCCC
Confidence            9999999999999 6699999999999999999999999999999999999 99999999994  1         25899


Q ss_pred             cCCCCCCCcchHHHHHHHHHHHHHHHhhc-EEEeCCCCcCCCceeeEeecCCCceEEEEEcc
Q 012950          387 FSSGPRICVGLNFAATEAKIALSMILQRY-RFNLSPSYVHSPVLVVTLRPQHGLQVIFQPLS  447 (452)
Q Consensus       387 Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r~  447 (452)
                      ||.|+|.|+|++||++|++++++.|+++| ++++.++...  ....++++..+++|++++|.
T Consensus       358 FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~--~~~~~~~~~~~l~v~~~~r~  417 (419)
T 1q5d_A          358 YGRGPHVCPGVSLARLEAEIAVGTIFRRFPEMKLKETPVF--GYHPAFRNIESLNVILKPSK  417 (419)
T ss_dssp             TCCGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEECSCCEE--CCCSSBCCEEECEEESSCC-
T ss_pred             CCCCCCcCccHHHHHHHHHHHHHHHHHhCCCeEECCCccc--ccccccCCCceeEEEEecCC
Confidence            99999999999999999999999999999 8999765221  12345667778999999886


No 39 
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00  E-value=6.1e-58  Score=447.03  Aligned_cols=361  Identities=22%  Similarity=0.270  Sum_probs=289.8

Q ss_pred             CceeeeccCcceEEeCCHHHHHHHHhcCCCCCCCCCc--hh---hHH-------hhhcCceeccCCccHHHHHhhhcccc
Q 012950            1 MNFLTWYGSRAQLVITQPELIKEILSNSDGTYPKVQA--PG---FLR-------KILGDGLVTAGGENWHRQRKLATLAF   68 (452)
Q Consensus         1 ~~~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~~~~--~~---~~~-------~~~g~~l~~~~~~~w~~~Rr~~~~~f   68 (452)
                      |||++++++.++++++||+++++|+.++.  +++++.  ..   .+.       ...+.++++.+|+.|+++||++.++|
T Consensus        29 pv~~~~~~~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~h~~~R~~~~~~f  106 (408)
T 1odo_A           29 PATWVDVLGVQAWSVSDPVLLKQLLTSSD--VSKDARAHWPAFGEVVGTWPLALWVAVENMFTAYGPNHRKLRRLVAPAF  106 (408)
T ss_dssp             SEEEEEETTEEEEEECCHHHHHHHTTCTT--EESCHHHHCTTHHHHTTTCTTTHHHHCCSGGGCCHHHHHHHHHTTGGGG
T ss_pred             CeEEeccCCCCEEEECCHHHHHHHHcCCC--cccccccccccccccccccccccccccccccccCChHHHHHHHHhhhhc
Confidence            68999998899999999999999998653  444321  01   011       11346788899999999999999999


Q ss_pred             chhhhhhhcchhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhc-CCceeehhhhHH-HHHHHHHHHhhcCC
Q 012950           69 YAESLRVTKSNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHS-EGKEIEVSQEFK-LLTSEIISRTAFGS  146 (452)
Q Consensus        69 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~-~~~~~d~~~~~~-~~~~~~i~~~~fG~  146 (452)
                      ++.+++                          .+.+.+.+.++.+++.|.+. +++++|+...+. .+++++|+. +||.
T Consensus       107 s~~~l~--------------------------~~~~~i~~~~~~l~~~l~~~~~~~~~d~~~~~~~~~~~~vi~~-~~G~  159 (408)
T 1odo_A          107 SARRVD--------------------------AMRPAVEAMVTGLVDRLAELPAGEPVDLRQELAYPLPIAVIGH-LMGV  159 (408)
T ss_dssp             SHHHHH--------------------------HHHHHHHHHHHHHHHHHHHSCTTSCEEHHHHTTTHHHHHHHHH-HHTC
T ss_pred             CHHHHH--------------------------HHHHHHHHHHHHHHHHHHhhcCCCCcchHHHHhhhhHHHHHHH-HhCC
Confidence            999999                          99999999999999999753 257899998887 499999996 7998


Q ss_pred             CccchhhHHHHHHhhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHH
Q 012950          147 SYLEGESIFNKLTNMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGL  226 (452)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~  226 (452)
                      +.++.+.+....    ..+..       ..       ....+..++.+.+.+++.+.++++++.        ..+|+++.
T Consensus       160 ~~~~~~~~~~~~----~~~~~-------~~-------~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~d~l~~  213 (408)
T 1odo_A          160 PQDRRDGFRALV----DGVFD-------TT-------LDQAEAQANTARLYEVLDQLIAAKRAT--------PGDDMTSL  213 (408)
T ss_dssp             CHHHHHHHHHHH----HHHHC-------TT-------CCHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHH
T ss_pred             CHHHHHHHHHHH----HHHhc-------cc-------CCHHHHHHHHHHHHHHHHHHHHHHhhC--------CCCCHHHH
Confidence            765322222111    11100       00       112345667778888888888877652        34799999


Q ss_pred             HHHhcCCCCCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHHHH
Q 012950          227 LLKAYHDPDMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKTMS  306 (452)
Q Consensus       227 ll~~~~~~~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~  306 (452)
                      |++...++..+..++++++.+++..+++||+|||+++++|++++|++||++|++|++|+                 +||+
T Consensus       214 ll~~~~~~~~~~~l~~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~-----------------~~l~  276 (408)
T 1odo_A          214 LIAARDDEGDGDRLSPEELRDTLLLMISAGYETTVNVIDQAVHTLLTRPDQLALVRKGE-----------------VTWA  276 (408)
T ss_dssp             HHHHHCC-----CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCHHHHHHHHHTS-----------------SCHH
T ss_pred             HHHhcccccccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCH-----------------HHHH
Confidence            99875431113469999999999999999999999999999999999999999999973                 4799


Q ss_pred             HHHHHhhcCCCCCCC-ccccccceeecC-CeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcc
Q 012950          307 MVINESLRLYPPAVN-ISRNVEREVRLG-KYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAF  384 (452)
Q Consensus       307 a~i~E~lRl~p~~~~-~~r~~~~d~~l~-g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~  384 (452)
                      |||+|+||++|++|. .+|++.+|++++ ||.||||+.|+++.+++||||++| +||++|+||||           ...+
T Consensus       277 a~i~E~lRl~p~~~~~~~R~~~~d~~l~~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dp~~F~PeR~-----------~~~~  344 (408)
T 1odo_A          277 DVVEETLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHPDWH-EDADTFDATRT-----------VKEH  344 (408)
T ss_dssp             HHHHHHHHHSCSBSCEEEEEESSCEECTTSCEECTTCEEEECHHHHTTCTTTS-TTTTSCCTTCS-----------CCCC
T ss_pred             HHHHHHHhhCCCccCCcceEeCCCeEcCCCcEECCCCEEEeChhhhcCChhhc-CCccccCCCCC-----------CCCC
Confidence            999999999999996 699999999999 999999999999999999999999 99999999994           1369


Q ss_pred             cccCCCCCCCcchHHHHHHHHHHHHHHHhhc-EEEeCCC-CcCCCceeeEeecCCCceEEEEE
Q 012950          385 LPFSSGPRICVGLNFAATEAKIALSMILQRY-RFNLSPS-YVHSPVLVVTLRPQHGLQVIFQP  445 (452)
Q Consensus       385 ~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~p~~~~~v~~~~  445 (452)
                      +|||.|+|.|+|++||++|++++++.|+++| ++++..+ .........++++..+++|.+++
T Consensus       345 ~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~~  407 (408)
T 1odo_A          345 LAFGHGVHFCLGAPLARMEVTLALESLFGRFPDLRLADPAEELPPVPSLISNGHQRLPVLLHA  407 (408)
T ss_dssp             CTTCSSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESCTTSCCCBCSCSSBCCBSCCEEECC-
T ss_pred             CCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCcceecCCccccccccCccccCcccceEEecC
Confidence            9999999999999999999999999999999 7998632 22222334567778899998865


No 40 
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=100.00  E-value=6.5e-58  Score=446.23  Aligned_cols=355  Identities=19%  Similarity=0.258  Sum_probs=291.9

Q ss_pred             CceeeeccCcceEEeCCHHHHHHHHhcCCCCCCCCCch--h----------hH-Hh---hhcCceeccCCccHHHHHhhh
Q 012950            1 MNFLTWYGSRAQLVITQPELIKEILSNSDGTYPKVQAP--G----------FL-RK---ILGDGLVTAGGENWHRQRKLA   64 (452)
Q Consensus         1 ~~~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~~~~~--~----------~~-~~---~~g~~l~~~~~~~w~~~Rr~~   64 (452)
                      |||++++|+.+.++++||+++++|+.++  .|++++..  .          .+ ..   ..+.++++.+|+.|+++||++
T Consensus        28 pv~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~h~~~R~~~  105 (404)
T 1z8o_A           28 PVTPVRFLGQDAWLVTGYDEAKAALSDL--RLSSDPKKKYPGVEVEFPAYLGFPEDVRNYFATNMGTSDPPTHTRLRKLV  105 (404)
T ss_dssp             SEEEEEETTEEEEEECSHHHHHHHHHCT--TEECCTTCCCTTCCCCCGGGTTCCHHHHHHHSSSGGGCCTTHHHHHHHHH
T ss_pred             CeeeecCCCceEEEEcCHHHHHHHHcCC--CccccccccccccccccccccccccchhhhcccccccCCCcHHHHHHHHH
Confidence            6899999999999999999999999875  57554321  1          11 22   246788889999999999999


Q ss_pred             ccccchhhhhhhcchhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhH-HHHHHHHHHHhh
Q 012950           65 TLAFYAESLRVTKSNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEF-KLLTSEIISRTA  143 (452)
Q Consensus        65 ~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~-~~~~~~~i~~~~  143 (452)
                      .++|++++++                          .+.+.+.+.++.+++.|..  ++++|+...+ ..+++++|+.+ 
T Consensus       106 ~~~fs~~~l~--------------------------~~~~~i~~~~~~l~~~l~~--~~~~d~~~~~~~~~~~~vi~~~-  156 (404)
T 1z8o_A          106 SQEFTVRRVE--------------------------AMRPRVEQITAELLDEVGD--SGVVDIVDRFAHPLPIKVICEL-  156 (404)
T ss_dssp             HTTSCHHHHH--------------------------HTHHHHHHHHHHHHHTSCS--SSEEEHHHHTTTHHHHHHHHHH-
T ss_pred             HHhhCHHHHH--------------------------HHHHHHHHHHHHHHHhhhh--cCCcchHHHHhHHHHHHHHHHH-
Confidence            9999999999                          9999999999999999975  5789998655 68999999985 


Q ss_pred             cCCCccchhhHHHHHHhhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcH
Q 012950          144 FGSSYLEGESIFNKLTNMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDY  223 (452)
Q Consensus       144 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~  223 (452)
                      ||.+.++.+.+.......    ..     ..|      |.  .++..++.+.+.+++.+.++++++.        ..+|+
T Consensus       157 ~G~~~~~~~~~~~~~~~~----~~-----~~~------p~--~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~dl  211 (404)
T 1z8o_A          157 LGVDEKYRGEFGRWSSEI----LV-----MDP------ER--AEQRGQAAREVVNFILDLVERRRTE--------PGDDL  211 (404)
T ss_dssp             TTCCGGGTTTHHHHHHHH----HC-----CCG------GG--HHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSH
T ss_pred             hCCCHHHHHHHHHHHHHH----hc-----cCC------hh--HHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCH
Confidence            998876443332222111    10     001      11  3455667778888888888887652        34799


Q ss_pred             HHHHHHh-cCCCCCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhcccc
Q 012950          224 FGLLLKA-YHDPDMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKL  302 (452)
Q Consensus       224 l~~ll~~-~~~~~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~l  302 (452)
                      ++.|++. ..+   +..++++++++++..+++||+|||+++++|++++|++||++|++|++|+                 
T Consensus       212 l~~ll~~~~~~---~~~l~~~ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~-----------------  271 (404)
T 1z8o_A          212 LSALIRVQDDD---DGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDP-----------------  271 (404)
T ss_dssp             HHHHHHCEETT---TEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCG-----------------
T ss_pred             HHHHHhhhccc---CCCCCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHCHHHHHHHHhCH-----------------
Confidence            9999986 432   3469999999999999999999999999999999999999999999984                 


Q ss_pred             HHHHHHHHHhhcCCCCCCCccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCC
Q 012950          303 KTMSMVINESLRLYPPAVNISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPA  382 (452)
Q Consensus       303 p~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~  382 (452)
                      .||+|||+|+||++|+++..+|.+.+|++++||.||||+.|+++.+++||||++| +||++|+||||.           .
T Consensus       272 ~~l~a~i~E~lRl~p~~~~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rd~~~~-~dP~~F~PeR~~-----------~  339 (404)
T 1z8o_A          272 SALPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQF-PDPHRFDVTRDT-----------R  339 (404)
T ss_dssp             GGHHHHHHHHHHHTCSSCCEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTSCC-----------T
T ss_pred             HhHHHHHHHHHHhcCCccCcceEECCCEEECCEEECCCCEEEecchhhcCCcccC-CChhhcCCCCCC-----------C
Confidence            4799999999999999997799999999999999999999999999999999999 999999999983           2


Q ss_pred             cccccCCCCCCCcchHHHHHHHHHHHHHHHhhc-EEEeCCCC-cCCCceeeEeecCCCceEEE
Q 012950          383 AFLPFSSGPRICVGLNFAATEAKIALSMILQRY-RFNLSPSY-VHSPVLVVTLRPQHGLQVIF  443 (452)
Q Consensus       383 ~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~-~~~~~~~~~~~p~~~~~v~~  443 (452)
                      .++|||.|+|.|+|++||.+|++++++.|+++| ++++.++. ........++++..+++|++
T Consensus       340 ~~~~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~l~v~~  402 (404)
T 1z8o_A          340 GHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFPALSLGIDADDVVWRRSLLLRGIDHLPVRL  402 (404)
T ss_dssp             TCCTTCSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCCCCCSSSCCCSCCEEET
T ss_pred             CccCCCCCCccCCcHHHHHHHHHHHHHHHHHhCCCcEecCCCCcceeccccccCCcceeEEEe
Confidence            589999999999999999999999999999999 59987531 22222345567777888875


No 41 
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=100.00  E-value=2.5e-58  Score=450.02  Aligned_cols=355  Identities=14%  Similarity=0.168  Sum_probs=293.4

Q ss_pred             Cceeee-ccCcceEEeCCHHHHHHHHhcCCCCCCCCC-chhhHHhhhcCc-eeccCCccHHHHHhhhccccchhhhhhhc
Q 012950            1 MNFLTW-YGSRAQLVITQPELIKEILSNSDGTYPKVQ-APGFLRKILGDG-LVTAGGENWHRQRKLATLAFYAESLRVTK   77 (452)
Q Consensus         1 ~~~~~~-~g~~~~vvv~~p~~~~~il~~~~~~f~~~~-~~~~~~~~~g~~-l~~~~~~~w~~~Rr~~~~~f~~~~l~~~~   77 (452)
                      |||+++ +|  +.++++|++++++|+.+. +.|++++ ........++.+ +++.+|+.|+++||++.++|++++++   
T Consensus        53 pv~~~~~~g--~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~R~~~~~~f~~~~l~---  126 (415)
T 2zwu_A           53 DLVWTRCNG--GHWIATRGQLIREAYEDY-RHFSSECPFIPREAGEAYDFIPTSMDPPEQRQFRALANQVVGMPVVD---  126 (415)
T ss_dssp             SEEEECGGG--CEEEECSHHHHHHHHHCT-TTEETTSCSSSHHHHHHCCCTTTTCCTTTTHHHHHHHHHHHSHHHHH---
T ss_pred             CeEEecCCC--CeEEEcCHHHHHHHHcCc-cccCCCcccCCCCccccccccCccCCCcHHHHHHHHHHhhhCHHHHH---
Confidence            578888 55  699999999999999754 4686654 222233334677 88899999999999999999999999   


Q ss_pred             chhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhH-HHHHHHHHHHhhcCCCccchhhHHH
Q 012950           78 SNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEF-KLLTSEIISRTAFGSSYLEGESIFN  156 (452)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~  156 (452)
                                             .+.+.+.++++.+++.|..  .+++|+...+ ..+++++|+.+ ||.++++.+++..
T Consensus       127 -----------------------~~~~~i~~~~~~l~~~l~~--~~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~~~~~~  180 (415)
T 2zwu_A          127 -----------------------KLENRIQELACSLIESLRP--QGQCNFTEDYAEPFPIRIFMLL-AGLPEEDIPHLKY  180 (415)
T ss_dssp             -----------------------HHHHHHHHHHHHHHHHHGG--GTEEEHHHHTTTHHHHHHHHHH-HTCCGGGHHHHHH
T ss_pred             -----------------------HHHHHHHHHHHHHHHHHHh--cCCccHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHH
Confidence                                   9999999999999999986  3589999765 78999999999 9998865333322


Q ss_pred             HHHhhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHhcCCCCC
Q 012950          157 KLTNMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKAYHDPDM  236 (452)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~  236 (452)
                      ....    +..    .    +   .|.    +..++.+.+.+++.+.++++++.        ...|+++.|++...+   
T Consensus       181 ~~~~----~~~----~----~---~P~----~~~~~~~~~~~~~~~~i~~r~~~--------~~~dll~~ll~~~~~---  230 (415)
T 2zwu_A          181 LTDQ----MTR----P----D---GSM----TFAEAKEALYDYLIPIIEQRRQK--------PGTDAISIVANGQVN---  230 (415)
T ss_dssp             HHHH----HHS----C----C---SSS----CHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHTCEET---
T ss_pred             HHHH----HHh----c----c---CHH----HHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHHhhhc---
Confidence            2111    100    0    0   121    45567778888899998887752        457999999976432   


Q ss_pred             CCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHHHHHHHHHhhcCC
Q 012950          237 TKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKTMSMVINESLRLY  316 (452)
Q Consensus       237 ~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~  316 (452)
                      +..++++++++++..+++||+|||+++++|++++|++||++|+++++|++                 ||+|||+|+||++
T Consensus       231 ~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~-----------------~l~a~i~E~lRl~  293 (415)
T 2zwu_A          231 GRPITSDEAKRMCGLLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERPE-----------------RIPAACEELLRRF  293 (415)
T ss_dssp             TEECCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCHHHHHHHHHCGG-----------------GHHHHHHHHHHHT
T ss_pred             CCCCCHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHhCHHHHHHHHhCHH-----------------HHHHHHHHHHhhc
Confidence            34699999999999999999999999999999999999999999999952                 8999999999999


Q ss_pred             CCCCCccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcccccCCCCCCCcc
Q 012950          317 PPAVNISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPFSSGPRICVG  396 (452)
Q Consensus       317 p~~~~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G  396 (452)
                      |+++++ |.+.+|++++||.||||+.|+++.+++||||++| +||++|+||||-           ..++|||.|+|.|+|
T Consensus       294 p~~~~~-R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~~~l~FG~G~r~C~G  360 (415)
T 2zwu_A          294 SLVADG-RILTSDYEFHGVQLKKGDQILLPQMLSGLDEREN-ACPMHVDFSRQK-----------VSHTTFGHGSHLCLG  360 (415)
T ss_dssp             CCBCCE-EEESSCEEETTEEECTTCEEECCHHHHHHCTTTS-SSTTSCCTTCSS-----------CCCCTTCCGGGCCSS
T ss_pred             CCcCCc-eeeCCCEEECCEEECCCCEEEeCchhhCCCchhC-CCccccCCCCCC-----------CCCCCCCCCCccCCC
Confidence            999998 9999999999999999999999999999999999 999999999951           258999999999999


Q ss_pred             hHHHHHHHHHHHHHHHhhcE-EEeCCCCcCCCceeeEeecCCCceEEEEEccc
Q 012950          397 LNFAATEAKIALSMILQRYR-FNLSPSYVHSPVLVVTLRPQHGLQVIFQPLSV  448 (452)
Q Consensus       397 ~~~a~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r~~  448 (452)
                      ++||.+|++++++.|+++|+ +++.++... .....++++..+++|.+++|+.
T Consensus       361 ~~lA~~e~~~~la~ll~~f~~~~~~~~~~~-~~~~~~~~~~~~lpv~~~~r~~  412 (415)
T 2zwu_A          361 QHLARREIIVTLKEWLTRIPDFSIAPGAQI-QHKSGIVSGVQALPLVWDPATT  412 (415)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCSCEECTTCCC-CEECSSBCEESCCEEECCGGGC
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCEECCCccc-ccCCccccCcceeEEEEecCCC
Confidence            99999999999999999998 999764221 0233456677799999999874


No 42 
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=100.00  E-value=7.4e-58  Score=447.81  Aligned_cols=374  Identities=13%  Similarity=0.194  Sum_probs=299.9

Q ss_pred             CceeeeccCcceEEeCCHHHHHHHHhcCCCCCCCCC-ch-hhHHhhhc-CceeccCCccHHHHHhhhccccchhhhhhhc
Q 012950            1 MNFLTWYGSRAQLVITQPELIKEILSNSDGTYPKVQ-AP-GFLRKILG-DGLVTAGGENWHRQRKLATLAFYAESLRVTK   77 (452)
Q Consensus         1 ~~~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~~~-~~-~~~~~~~g-~~l~~~~~~~w~~~Rr~~~~~f~~~~l~~~~   77 (452)
                      |||++++++.+.+++++|+.++ ++.++. .|++.. .. .....++| .++++.+|+.|+++|+++.++|++++++   
T Consensus        34 pv~~~~~~g~~~~vv~~~~~~~-~l~~~~-~f~~~~~~~~~~~~~~~g~~~l~~~dg~~h~~~R~~~~~~fs~~~l~---  108 (415)
T 3awm_A           34 NAFESRFLLKKTNCLKGAKAAE-IFYDTT-RFEREGAMPVAIQKTLLGQGGVQGLDGETHRHRKQMFMGLMTPERVR---  108 (415)
T ss_dssp             SEEEEEETTEEEEEEESHHHHH-HHTCTT-TEECTTCSCHHHHTTTSCSSSGGGCCHHHHHHHHHHHHTTCCHHHHH---
T ss_pred             CeEEEecCCCcEEEEeCHHHHH-HHhccc-ccccccccchhhhhhccCCcceeecCcHHHHHHHHHHHHhcCHHHHH---
Confidence            5888998888999999999986 666543 675543 21 22334556 5788899999999999999999999999   


Q ss_pred             chhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhHHHHHHHHHHHhhcCCCccchhhHHHH
Q 012950           78 SNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEFKLLTSEIISRTAFGSSYLEGESIFNK  157 (452)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~  157 (452)
                                             .+.+.+.+.++++++.|..  ++++|+...+..+++++|+.+ ||.++++. ++...
T Consensus       109 -----------------------~~~~~i~~~~~~ll~~~~~--~~~vdl~~~~~~~~~~vi~~~-~G~~~~~~-~~~~~  161 (415)
T 3awm_A          109 -----------------------ALAQLFEAEWRRAVPGWTR--KGEIVFYDELHEPLTRAVCAW-AGVPLPDD-EAGNR  161 (415)
T ss_dssp             -----------------------HHHHHHHHHHHHHHHHHHH--HSEEEHHHHHHHHHHHHHHHH-HTCCCCGG-GHHHH
T ss_pred             -----------------------HHHHHHHHHHHHHHHhhcc--CCcEeHHHHHHHHHHHHHHHH-cCCCCCcc-hHHHH
Confidence                                   9999999999999999976  468999999999999999999 89987642 22221


Q ss_pred             HHhhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHhcCCCCCC
Q 012950          158 LTNMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKAYHDPDMT  237 (452)
Q Consensus       158 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~  237 (452)
                      ...+.....      .++.   ..  +...+..++.+.+.+++.+.++++++....    ...+|+++.|++....+  +
T Consensus       162 ~~~~~~~~~------~~~~---~~--~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~----~~~~d~l~~ll~~~~~~--g  224 (415)
T 3awm_A          162 AGELRALFD------AAGS---AS--PRHLWSRLARRRVDAWAKRIIEGIRAGSIG----SGSGTAAYAIAWHRDRH--D  224 (415)
T ss_dssp             HHHHHHHHH------STTC---SS--HHHHHHHHHHHHHHHHHHHHHHHHHHTSSC----CCTTSHHHHHHHCBCTT--S
T ss_pred             HHHHHHHHH------Hhcc---cC--chHHHHHHHHHHHHHHHHHHHHHHHHhhhc----CCCCCHHHHHHhhhhcc--C
Confidence            111111111      1111   11  122345667778888999999887764211    14579999999865432  3


Q ss_pred             CCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHHHHHHHHHhhcCCC
Q 012950          238 KRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKTMSMVINESLRLYP  317 (452)
Q Consensus       238 ~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p  317 (452)
                      ..++++++.+++..++ ||++||+++++|++++|++||++|++|++|                 +|||+|||+|+||++|
T Consensus       225 ~~~~~~~~~~~~~~~~-ag~~tt~~~l~~~l~~L~~~P~~~~~l~~e-----------------~~~l~a~i~E~lRl~p  286 (415)
T 3awm_A          225 DLLSPHVAAVELVNVL-RPTVAIAVYITFVAHALQTCSGIRAALVQQ-----------------PDYAELFVQEVRRFYP  286 (415)
T ss_dssp             CBCCHHHHHHHHHHHH-HHHHTHHHHHHHHHHHHHHSTTHHHHHHHC-----------------TTHHHHHHHHHHHHSC
T ss_pred             CCCCHHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHhChHHHHHHHHH-----------------HHHHHHHHHHHhhcCC
Confidence            4688888888777655 999999999999999999999999999997                 6999999999999999


Q ss_pred             CCCCccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcccccCCC----CCC
Q 012950          318 PAVNISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPFSSG----PRI  393 (452)
Q Consensus       318 ~~~~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G----~r~  393 (452)
                      +++..+|.+.+|++++||.||||+.|+++.+++||||++| +||++|+|+||++.+     .....++|||.|    +|.
T Consensus       287 ~~~~~~R~~~~d~~l~G~~ip~G~~V~~~~~~~~rdp~~~-~dp~~F~P~R~~~~~-----~~~~~~~~FG~G~r~~~r~  360 (415)
T 3awm_A          287 FFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATW-ADPQEFRPERFRAWD-----EDSFNFIPQGGGDHYLGHR  360 (415)
T ss_dssp             CSCEEEEEESSCEEETTEEECTTCEEEEEHHHHHTCHHHH-SSTTSCCGGGGGGCC-----CCSSSCCTTCCSCTTTSCC
T ss_pred             CccccceeecCCeEECCEEECCCCEEEeCchhhcCCcccc-CCccccChhhcCCCC-----CCCCCccCCCCCCCCCCCc
Confidence            9998899999999999999999999999999999999999 999999999999652     245689999999    599


Q ss_pred             CcchHHHHHHHHHHHHHHHhhcEEEeCCCCcCCCceeeEeecCCCceEEEEEcc
Q 012950          394 CVGLNFAATEAKIALSMILQRYRFNLSPSYVHSPVLVVTLRPQHGLQVIFQPLS  447 (452)
Q Consensus       394 C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r~  447 (452)
                      |+|++||.+|++++++.|+++|+|++.++.........++.|++++.|++++.+
T Consensus       361 C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  414 (415)
T 3awm_A          361 CPGEWIVLAIMKVAAHLLVNAMRYDVPDQDLSIDFARLPALPKSGFVMRNVHIG  414 (415)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHTCEEECCSCCCCBCTTSSSCCBTTCCEEEEEESC
T ss_pred             CchHHHHHHHHHHHHHHHHHhcEEEeCCCCCCcCcCCCccccCCCceEEEEeCC
Confidence            999999999999999999999999987653222223356789999999998764


No 43 
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=100.00  E-value=2.8e-58  Score=448.08  Aligned_cols=356  Identities=16%  Similarity=0.199  Sum_probs=290.2

Q ss_pred             CceeeeccCcceEEeCCHHHHHHHHhcCCCCCCCCCchhh-HHhh-hcCceeccCCccHHHHHhhhccccchhhhhhhcc
Q 012950            1 MNFLTWYGSRAQLVITQPELIKEILSNSDGTYPKVQAPGF-LRKI-LGDGLVTAGGENWHRQRKLATLAFYAESLRVTKS   78 (452)
Q Consensus         1 ~~~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~~~~~~~-~~~~-~g~~l~~~~~~~w~~~Rr~~~~~f~~~~l~~~~~   78 (452)
                      |||++++|+ +.++|+||+++++|+.+ .+.|++++.... .... .+.++++.+|+.|+++||++.++|+++.++    
T Consensus        36 pv~~~~~~~-~~~vv~~~~~v~~vl~~-~~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~f~~~~l~----  109 (398)
T 4fb2_A           36 PIGWSEAYG-GHWVVAGYKEIQAVIQN-TKAFSNKGVTFPRYETGEFELMMAGQDDPVHKKYRQLVAKPFSPEATD----  109 (398)
T ss_dssp             SEEEECGGG-CEEEECSHHHHHHHHTC-CSSEEGGGCSSSCC----CCCTTTTCCTTHHHHHHHHHHTTTCHHHHH----
T ss_pred             CeEEecCCC-CEEEEccHHHHHHHHhC-hhhccCCcccccCCCCcccccCcccCCchHHHHHHHHHHHhhCHHHHH----
Confidence            588999986 59999999999999965 447755442111 1111 234567889999999999999999999999    


Q ss_pred             hhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhH-HHHHHHHHHHhhcCCCccchhhHHHH
Q 012950           79 NCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEF-KLLTSEIISRTAFGSSYLEGESIFNK  157 (452)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~  157 (452)
                                            .+.+.+.+++..+++.|..  .+++|+...+ ..+++++++. +||.+.++.+++...
T Consensus       110 ----------------------~~~~~i~~~~~~l~~~l~~--~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~~~~~~~  164 (398)
T 4fb2_A          110 ----------------------LFTEQLRQSTNDLIDARIE--LGEGDAATWLANEIPARLTAI-LLGLPPEDGDTYRRW  164 (398)
T ss_dssp             ----------------------TTHHHHHHHHHHHHHTTTT--TTEEEHCCCCCTTHHHHHHHH-HTTSCGGGHHHHHHH
T ss_pred             ----------------------HHHHHHHHHHHHHHHHHhh--cCCccHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHH
Confidence                                  9999999999999999976  4678976555 6899999999 689877543333222


Q ss_pred             HHhhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHhcCCCCCC
Q 012950          158 LTNMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKAYHDPDMT  237 (452)
Q Consensus       158 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~  237 (452)
                      ...+..           +        ....+..++.+.+.+++.+.++++++.        ..+|+++.|++...+   +
T Consensus       165 ~~~~~~-----------~--------~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~d~l~~ll~~~~~---~  214 (398)
T 4fb2_A          165 VWAITH-----------V--------ENPEEGAEIFAELVAHARTLIAERRTN--------PGNDIMSRVIMSKID---G  214 (398)
T ss_dssp             HHHHHH-----------C--------CCHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHHCCBT---T
T ss_pred             HHHHhc-----------C--------CCHHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHHcccC---C
Confidence            221110           1        112356677788889999999888762        457999999987543   3


Q ss_pred             CCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHHHHHHHHHhhcCCC
Q 012950          238 KRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKTMSMVINESLRLYP  317 (452)
Q Consensus       238 ~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p  317 (452)
                      ..++++++++++..+++||+|||+++++|++++|++||++|+++++|++                 |++|||+|+||++|
T Consensus       215 ~~l~~~~i~~~~~~l~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~-----------------~l~a~i~E~lRl~p  277 (398)
T 4fb2_A          215 ESLSEDDLIGFFTILLLGGIDNTARFLSSVFWRLAWDIELRRRLIAHPE-----------------LIPNAVDELLRFYG  277 (398)
T ss_dssp             BCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHCGG-----------------GHHHHHHHHHHHHC
T ss_pred             CCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH-----------------HHHHHHHHHHHhCC
Confidence            4699999999999999999999999999999999999999999999953                 68999999999999


Q ss_pred             CCCCccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcccccCCCCCCCcch
Q 012950          318 PAVNISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPFSSGPRICVGL  397 (452)
Q Consensus       318 ~~~~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~  397 (452)
                      +++ .+|.+.+|++++||.||||+.|+++.+++||||++| +||++|+||||-           ..++|||.|+|.|+|+
T Consensus       278 ~~~-~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dp~~F~PeR~~-----------~~~~~FG~G~r~C~G~  344 (398)
T 4fb2_A          278 PAM-VGRLVTQEVTVGDITMKPGQTAMLWFPIASRDRSAF-DSPDNIVIERTP-----------NRHLSLGHGIHRCLGA  344 (398)
T ss_dssp             CBC-EEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCCS-----------CCCCTTCCSTTCCTTH
T ss_pred             CcC-CCeeeCCCEEECCEEECCCCEEEechHhhcCChhhC-CCcCeeCCCCCC-----------CCCCCCCCCCcCCCCH
Confidence            999 999999999999999999999999999999999999 999999999972           2589999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhc-EEEeCCCCcCCCceeeEeecCCCceEEEEEccc
Q 012950          398 NFAATEAKIALSMILQRY-RFNLSPSYVHSPVLVVTLRPQHGLQVIFQPLSV  448 (452)
Q Consensus       398 ~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r~~  448 (452)
                      +||.+|++++++.|+++| +|+++++....... ...+....++|+++++..
T Consensus       345 ~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~-~~~~~~~~lpv~~~~~~~  395 (398)
T 4fb2_A          345 HLIRVEARVAITEFLKRIPEFSLDPNKECEWLM-GQVAGMLHVPIIFPKGKR  395 (398)
T ss_dssp             HHHHHHHHHHHHHHHHHCCSCEECTTSCCEEEC-SSBCEEEECEEECCCCCC
T ss_pred             HHHHHHHHHHHHHHHHhCCCcEECCCCCceecc-ccccccceeEEEEcCCCC
Confidence            999999999999999999 99998764322211 223333469999998864


No 44 
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=100.00  E-value=8.6e-58  Score=448.93  Aligned_cols=361  Identities=16%  Similarity=0.183  Sum_probs=292.3

Q ss_pred             Cceeeecc-------CcceEEeCCHHHHHHHHhcCCCCCCCCCc---hhhHHhh--hcCceeccCCccHHHHHhhhcccc
Q 012950            1 MNFLTWYG-------SRAQLVITQPELIKEILSNSDGTYPKVQA---PGFLRKI--LGDGLVTAGGENWHRQRKLATLAF   68 (452)
Q Consensus         1 ~~~~~~~g-------~~~~vvv~~p~~~~~il~~~~~~f~~~~~---~~~~~~~--~g~~l~~~~~~~w~~~Rr~~~~~f   68 (452)
                      |||+++++       +.++++|+||+.+++|+.++. .|++++.   ......+  .+.++++.+|+.|+++||++.++|
T Consensus        58 pv~~~~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~l~~~f  136 (435)
T 2wm5_A           58 PISFWPTIELPGFVAGNGHWALTKYDDVFYASRHPD-IFSSYPNITINDQTPELAEYFGSMIVLDDPRHQRLRSIVSRAF  136 (435)
T ss_dssp             SEEEECCCCC---CCCCCEEEECSHHHHHHHHHCTT-TEECSSCCSSSCCCHHHHHHHHGGGGCCTTHHHHHHHHHHHTC
T ss_pred             CeEecccccccccCCCCCeEEEcCHHHHHHHHcCcc-cccCccccccCccccchhhhccccccCCcHHHHHHHHHhHHhh
Confidence            57888886       678999999999999999753 6865531   1112222  357788899999999999999999


Q ss_pred             chhhhhhhcchhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcC-CceeehhhhH-HHHHHHHHHHhhcCC
Q 012950           69 YAESLRVTKSNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSE-GKEIEVSQEF-KLLTSEIISRTAFGS  146 (452)
Q Consensus        69 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~-~~~~d~~~~~-~~~~~~~i~~~~fG~  146 (452)
                      ++++++                          .+.+.+.+.++.+++.|...+ ++++|+...+ ..+++++|+.+ ||.
T Consensus       137 s~~~l~--------------------------~~~~~i~~~~~~ll~~l~~~~~~~~vd~~~~~~~~~~~~vi~~~-~G~  189 (435)
T 2wm5_A          137 TPKVVA--------------------------RIEAAVRDRAHRLVSSMIANNPDRQADLVSELAGPLPLQIICDM-MGI  189 (435)
T ss_dssp             CHHHHH--------------------------HHHHHHHHHHHHHHHHHHHHCTTSEEEHHHHTTTHHHHHHHHHH-HTC
T ss_pred             CHHHHH--------------------------HHHHHHHHHHHHHHHHHHhcCCCCcEehHHHHHHHHHHHHHHHH-cCC
Confidence            999999                          999999999999999997642 3489998766 78999999999 999


Q ss_pred             CccchhhHHHHHHhhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHH
Q 012950          147 SYLEGESIFNKLTNMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGL  226 (452)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~  226 (452)
                      ++++.+.+........    .    ...|.+   .+  ..++..++.+.+.+++.+.++++++.        ..+|+++.
T Consensus       190 ~~~~~~~~~~~~~~~~----~----~~~p~~---~~--~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~dll~~  248 (435)
T 2wm5_A          190 PKADHQRIFHWTNVIL----G----FGDPDL---AT--DFDEFMQVSADIGAYATALAEDRRVN--------HHDDLTSS  248 (435)
T ss_dssp             CGGGHHHHHHHHHHHH----H----TTCTTS---CC--CHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHH
T ss_pred             CHHHHHHHHHHHHHHh----c----cCCcch---hh--hHHHHHHHHHHHHHHHHHHHHHHhcC--------CCCCHHHH
Confidence            8865433332222111    1    112322   11  22456677788889999998887752        45799999


Q ss_pred             HHHhcCCCCCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHHHH
Q 012950          227 LLKAYHDPDMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKTMS  306 (452)
Q Consensus       227 ll~~~~~~~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~  306 (452)
                      |++...+   +..++++++++++..+++||+|||+++++|++++|++||++|+++++|++                +||+
T Consensus       249 ll~~~~~---~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~----------------~~l~  309 (435)
T 2wm5_A          249 LVEAEVD---GERLSSREIASFFILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSDFD----------------GLAP  309 (435)
T ss_dssp             HHHCCBT---TBCCCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHSHH----------------HHHH
T ss_pred             HHhhhcc---CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCHHHHHHHhChH----------------hHHH
Confidence            9986432   34699999999999999999999999999999999999999999999975                4899


Q ss_pred             HHHHHhhcCCCCCCCccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcccc
Q 012950          307 MVINESLRLYPPAVNISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLP  386 (452)
Q Consensus       307 a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~  386 (452)
                      |||+|+||++|+++..+|.+.+|++++||.||||+.|+++.+++||||++| +||++|+||||  +         ..++|
T Consensus       310 a~i~E~lRl~p~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f-~dP~~F~PeR~--~---------~~~lp  377 (435)
T 2wm5_A          310 TAVEEIVRWASPVVYMRRTLTQDIELRGTKMAAGDKVSLWYCSANRDESKF-ADPWTFDLARN--P---------NPHLG  377 (435)
T ss_dssp             HHHHHHHHHHCSBCCEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTCCCTTCC--S---------CCCCT
T ss_pred             HHHHHHHhhcCcccCcceEeCCCeeECCEEECCCCEEEeCHHHhcCCcccC-cCCCccCCCCC--C---------CCCCC
Confidence            999999999999997799999999999999999999999999999999999 99999999994  1         25899


Q ss_pred             cCC-CCCCCcchHHHHHHHHHHHHHHHhhcE-EEeCCCCcCCCceeeEeecCCCceEEE
Q 012950          387 FSS-GPRICVGLNFAATEAKIALSMILQRYR-FNLSPSYVHSPVLVVTLRPQHGLQVIF  443 (452)
Q Consensus       387 Fg~-G~r~C~G~~~a~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~p~~~~~v~~  443 (452)
                      ||. |+|.|+|++||.+|++++++.|+++|+ +++.+....  .....+++...++|+|
T Consensus       378 FG~~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~--~~~~~~~~~~~lpv~~  434 (435)
T 2wm5_A          378 FGGGGAHFCLGANLARREIRVAFDELRRQMPDVVATEEPAR--LLSQFIHGIKTLPVTW  434 (435)
T ss_dssp             TCSSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEECSCCEE--CCCSSBCCEEECEEEC
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCccEECCCccc--cccccccCccceeEEe
Confidence            999 999999999999999999999999997 999753211  1223344445677665


No 45 
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=100.00  E-value=9.4e-58  Score=445.24  Aligned_cols=352  Identities=16%  Similarity=0.201  Sum_probs=285.6

Q ss_pred             Cceeee----c-cC-cceEEeCCHHHHHHHH-hcCCCCCCCCCch--h--hHH-h-hhcCceeccCCccHHHHHhhhccc
Q 012950            1 MNFLTW----Y-GS-RAQLVITQPELIKEIL-SNSDGTYPKVQAP--G--FLR-K-ILGDGLVTAGGENWHRQRKLATLA   67 (452)
Q Consensus         1 ~~~~~~----~-g~-~~~vvv~~p~~~~~il-~~~~~~f~~~~~~--~--~~~-~-~~g~~l~~~~~~~w~~~Rr~~~~~   67 (452)
                      |||+++    + |+ .++|+++||+++++|+ .++  .|++++..  .  .+. . ..+.++++.+|+.|+++||++.++
T Consensus        38 pv~~~~~~~~~~~~~~~~vvv~~~~~i~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~R~~~~~~  115 (406)
T 1ued_A           38 PLVRIVGESSTQLGRDFVWQAHGYEVVRRILGDHE--HFTTRPQFTQSKSGAHVEAQFVGQISTYDPPEHTRLRKMLTPE  115 (406)
T ss_dssp             SEEEEESHHHHHTTSSCEEEECSHHHHHHHHHCCS--SEECCCCC---------CGGGTTCGGGCCTTHHHHHHHHHGGG
T ss_pred             CeeeecccccCCCCCccEEEEcCHHHHHHHHhhCc--cccccccccccccccccccccccccccCCCHHHHHHHHHhhhh
Confidence            688999    7 78 9999999999999999 543  35443321  1  111 1 134578888999999999999999


Q ss_pred             cchhhhhhhcchhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhHHH-HHHHHHHHhhcCC
Q 012950           68 FYAESLRVTKSNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEFKL-LTSEIISRTAFGS  146 (452)
Q Consensus        68 f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~~~-~~~~~i~~~~fG~  146 (452)
                      |++++++                          .+.+.+.++++.+++.|.. .++++|+...+.. +++++|+ .+||.
T Consensus       116 fs~~~l~--------------------------~~~~~i~~~~~~l~~~l~~-~g~~~d~~~~~~~~~~~~vi~-~~~G~  167 (406)
T 1ued_A          116 FTVRRIR--------------------------RMEPAIQSLIDDRLDLLEA-EGPSADLQGLFADPVGAHALC-ELLGI  167 (406)
T ss_dssp             SSHHHHH--------------------------HHHHHHHHHHHHHHHHHHH-HCTTEEHHHHTHHHHHHHHHH-HHHTC
T ss_pred             hCHHHHH--------------------------HHHHHHHHHHHHHHHHHHh-cCCCeeHHHHHHHHhHHHHHH-HHcCC
Confidence            9999999                          9999999999999999975 3468999998875 9999999 47998


Q ss_pred             CccchhhHHHHHHhhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHH
Q 012950          147 SYLEGESIFNKLTNMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGL  226 (452)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~  226 (452)
                      +.++.+++.........        .          .....+..++.+.+.+++.+.++++++.        ...|+++.
T Consensus       168 ~~~~~~~~~~~~~~~~~--------~----------~~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~d~l~~  221 (406)
T 1ued_A          168 PRDDQREFVRRIRRNAD--------L----------SRGLKARAADSAAFNRYLDNLLARQRAD--------PDDGLLGM  221 (406)
T ss_dssp             CHHHHHHHHHHHHHCC---------------------CCHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHH
T ss_pred             CHHHHHHHHHHHHHHHh--------c----------cCCHHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHH
Confidence            76432222221111100        0          0112355667778888888888887652        34799999


Q ss_pred             HHHhcCCCCCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHHHH
Q 012950          227 LLKAYHDPDMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKTMS  306 (452)
Q Consensus       227 ll~~~~~~~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~  306 (452)
                      |++..     +..++++++++++..+++||+|||+++++|++++|++||++|+++++|++                 ||+
T Consensus       222 ll~~~-----~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~~-----------------~l~  279 (406)
T 1ued_A          222 IVRDH-----GDNVTDEELKGLCTALILGGVETVAGMIGFGVLALLDNPGQIELLFESPE-----------------KAE  279 (406)
T ss_dssp             HHHHH-----GGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGTTHHHHCHH-----------------HHH
T ss_pred             HHHhc-----CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhChHHHHHHHhCHH-----------------HHH
Confidence            99874     23689999999999999999999999999999999999999999999863                 689


Q ss_pred             HHHHHhhcCCCCCCC-ccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCccc
Q 012950          307 MVINESLRLYPPAVN-ISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFL  385 (452)
Q Consensus       307 a~i~E~lRl~p~~~~-~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~  385 (452)
                      |||+|+||++|+++. .+|++.+|++++||.||||+.|+++.+++||||++| +||++|+||||-           ..++
T Consensus       280 a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dp~~F~PeR~~-----------~~~~  347 (406)
T 1ued_A          280 RVVNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALT-PDPDVLDANRAA-----------VSDV  347 (406)
T ss_dssp             HHHHHHHHHHCSSCSCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTSCC-----------CCCC
T ss_pred             HHHHHHHhcCCCcccCcceecCCCEEECCEEECCCCEEEecHHHhcCCchhC-CChhhcCCCCCC-----------CCCC
Confidence            999999999999996 699999999999999999999999999999999999 999999999981           2589


Q ss_pred             ccCCCCCCCcchHHHHHHHHHHHHHHHhhc-EEEeCCC-CcCCCceeeEeecCCCceEEE
Q 012950          386 PFSSGPRICVGLNFAATEAKIALSMILQRY-RFNLSPS-YVHSPVLVVTLRPQHGLQVIF  443 (452)
Q Consensus       386 ~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~p~~~~~v~~  443 (452)
                      |||.|+|.|+|++||++|++++++.|+++| ++++.++ .........++++ .+++|+|
T Consensus       348 pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~-~~lpv~~  406 (406)
T 1ued_A          348 GFGHGIHYCVGAALARSMLRMAYQTLWRRFPGLRLAVPIEEVKYRSAFVDCP-DQVPVTW  406 (406)
T ss_dssp             TTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCCSSSCCB-SCCEEEC
T ss_pred             CCCCCCcCCCcHHHHHHHHHHHHHHHHHhCCCceecCCcccccccccccccC-CeeeeeC
Confidence            999999999999999999999999999999 7999743 2222233455678 8888864


No 46 
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=100.00  E-value=5.1e-58  Score=448.01  Aligned_cols=361  Identities=17%  Similarity=0.234  Sum_probs=290.7

Q ss_pred             eccCcceEEeCCHHHHHHHHhcCCCCCCCCCchhhHHh--hhcCceeccCCccHHHHHhhhccccchhhhhhhcchhhhh
Q 012950            6 WYGSRAQLVITQPELIKEILSNSDGTYPKVQAPGFLRK--ILGDGLVTAGGENWHRQRKLATLAFYAESLRVTKSNCLMF   83 (452)
Q Consensus         6 ~~g~~~~vvv~~p~~~~~il~~~~~~f~~~~~~~~~~~--~~g~~l~~~~~~~w~~~Rr~~~~~f~~~~l~~~~~~~~~~   83 (452)
                      |+++.+.++++||+++++++.++. .|++++... +..  ..+.++++.+|+.|+++||++.++|++++++         
T Consensus        44 ~~~~~~~~vv~~~~~v~~vl~~~~-~f~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~R~~~~~~fs~~~l~---------  112 (411)
T 2jjn_A           44 WQDRYGVWHVFRHADVQTVLRDTA-TFSSDPTRV-IEGASPTPGMIHEIDPPEHRALRKVVSSAFTPRTIS---------  112 (411)
T ss_dssp             EECTTSCEEECSHHHHHHHHHCTT-TEESCGGGG-STTCCCCTTCGGGCCTTHHHHHHHHHHHHSCHHHHH---------
T ss_pred             ccCCCCeEEECCHHHHHHHHcCcc-cccCccccc-CCcccccccccccCCchHHHHHHHHhhhhcCHHHHH---------
Confidence            677788999999999999998754 686654321 222  2346788889999999999999999999999         


Q ss_pred             HHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhh-HHHHHHHHHHHhhcCCCccchhhHHHHHHhhH
Q 012950           84 KLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQE-FKLLTSEIISRTAFGSSYLEGESIFNKLTNMS  162 (452)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~-~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~  162 (452)
                                       .+.+.+.+.++.+++.  .  ++++|+... ...+++++|+.+ ||.+.++.+++......+ 
T Consensus       113 -----------------~~~~~i~~~~~~ll~~--~--~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~~~~~~~~~~~~-  169 (411)
T 2jjn_A          113 -----------------DLEPRIRDVTRSLLAD--A--GESFDLVDVLAFPLPVTIVAEL-LGLPPMDHEQFGDWSGAL-  169 (411)
T ss_dssp             -----------------TTHHHHHHHHHHHHHT--S--CSEEEHHHHTTTHHHHHHHHHH-HTCCSCCCSTTCCHHHHH-
T ss_pred             -----------------HHHHHHHHHHHHHHhc--C--CCceeHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHH-
Confidence                             9999999999999988  2  468999854 568999999998 999876543332221111 


Q ss_pred             HHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHhcCCCCCCCCCCH
Q 012950          163 FLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKAYHDPDMTKRISL  242 (452)
Q Consensus       163 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~  242 (452)
                         ..    ...|.   +++....++..++.+.+.+++.+.++++++.        ..+|+++.|++...+   +..+++
T Consensus       170 ---~~----~~~~~---~~~p~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~d~l~~ll~~~~~---~~~l~~  228 (411)
T 2jjn_A          170 ---VD----IQMDD---PTDPALAERIADVLNPLTAYLKARCAERRAD--------PGDDLISRLVLAEVD---GRALDD  228 (411)
T ss_dssp             ---HH----SCCSC---TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHHCCBT---TBCCCH
T ss_pred             ---Hh----ccCcc---ccchHHHHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHhcccC---CCCCCH
Confidence               11    11121   1111223345566778888888888887651        457999999986432   346999


Q ss_pred             HHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHHHHHHHHHhhcCCCCCCCc
Q 012950          243 DVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKTMSMVINESLRLYPPAVNI  322 (452)
Q Consensus       243 ~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~  322 (452)
                      +++.+++..+++||+|||+++++|++++|++||++|+++++|++                 ||+|||+|+||++|++++.
T Consensus       229 ~el~~~~~~~~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~-----------------~l~a~i~E~lRl~p~~~~~  291 (411)
T 2jjn_A          229 EEAANFSTALLLAGHITTTVLLGNIVRTLDEHPAHWDAAAEDPG-----------------RIPAIVEEVLRYRPPFPQM  291 (411)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHHHHHHCGG-----------------GHHHHHHHHHHHSCSSCEE
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH-----------------hHHHHHHHHhhhCCCcCCc
Confidence            99999999999999999999999999999999999999999963                 8999999999999999988


Q ss_pred             cccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcccccCCCCCCCcchHHHHH
Q 012950          323 SRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPFSSGPRICVGLNFAAT  402 (452)
Q Consensus       323 ~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~  402 (452)
                      +|++.+|++++||.||||+.|+++.+++||||++| +||++|+||||.+         ...++|||.|+|.|+|++||.+
T Consensus       292 ~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~~---------~~~~~pFG~G~r~C~G~~lA~~  361 (411)
T 2jjn_A          292 QRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAH-DDPDRFDPSRKSG---------GAAQLSFGHGVHFCLGAPLARL  361 (411)
T ss_dssp             EEEESSCEEETTEEECSSCEEEEEHHHHHTCTTTS-SSTTSCCTTCCCS---------SCCCGGGCSSTTCCTTHHHHHH
T ss_pred             ceEECCCeEECCEEECCCCEEEechhhhCCChhhc-CCccccCCCCCCC---------CCCccCCCCCCccCcCHHHHHH
Confidence            99999999999999999999999999999999999 9999999999842         1258999999999999999999


Q ss_pred             HHHHHHHHHHhhcE-EEeCCCCcCCCceeeEeecCCCceEEEEEccc
Q 012950          403 EAKIALSMILQRYR-FNLSPSYVHSPVLVVTLRPQHGLQVIFQPLSV  448 (452)
Q Consensus       403 ~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r~~  448 (452)
                      |++++++.|+++|+ +++.++..........+++..+++|.++++..
T Consensus       362 e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~lpv~~~~~~r  408 (411)
T 2jjn_A          362 ENRVALEEIIARFGRLTVDRDDERLRHFEQIVLGTRHLPVLAGSSPR  408 (411)
T ss_dssp             HHHHHHHHHHHHHSCCEECCSSCCCCBCCSSSSSBSCCEEECSCCTT
T ss_pred             HHHHHHHHHHHhCCcceECCCCceeccccccccCcceeEEEecCCCC
Confidence            99999999999995 99974322210223455666789999988753


No 47 
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=100.00  E-value=6e-58  Score=459.34  Aligned_cols=402  Identities=15%  Similarity=0.155  Sum_probs=289.6

Q ss_pred             CceeeeccCcceEEeCCHHHHHHHHhcCCCCCCCCC-chhhHHhhhcCceeccCCccHHHHHhhhccccchhhhhhhcch
Q 012950            1 MNFLTWYGSRAQLVITQPELIKEILSNSDGTYPKVQ-APGFLRKILGDGLVTAGGENWHRQRKLATLAFYAESLRVTKSN   79 (452)
Q Consensus         1 ~~~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~~~-~~~~~~~~~g~~l~~~~~~~w~~~Rr~~~~~f~~~~l~~~~~~   79 (452)
                      +||++++|+.+++|++||+++++++.++...++... ....+...+|.+++..+++.|+   |+..+.|+.+.++     
T Consensus        53 ~i~~v~lg~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~r---r~~~~~~~~~~l~-----  124 (498)
T 3b6h_A           53 DIFTILVGGRYVTVLLDPHSYDAVVWEPRTRLDFHAYAIFLMERIFDVQLPHYSPSDEK---ARMKLTLLHRELQ-----  124 (498)
T ss_dssp             SEEEEEETTEEEEEECCGGGHHHHHTCCTTTEECCHHHHHHHHHTSCCCCTTCCHHHHH---HHHHTTSSHHHHH-----
T ss_pred             CeEEEEECCeeEEEEcCHHHHHHHHhCccccCCchhhHHHHHHHHcCCCccccCHHHHH---HHHHHhhchHhHH-----
Confidence            689999999999999999999999987653243222 2234445567777666777664   4555688888887     


Q ss_pred             hhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhc---CCceeehhhhHHHHHHHHHHHhhcCCCccchhh---
Q 012950           80 CLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHS---EGKEIEVSQEFKLLTSEIISRTAFGSSYLEGES---  153 (452)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~---~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~~~---  153 (452)
                                           .+.+.+.+++...+......   .+..+++...+..+++++++..+||.+++..+.   
T Consensus       125 ---------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~vi~~~~~~~~fG~~~~~~~~~~~  183 (498)
T 3b6h_A          125 ---------------------ALTEAMYTNLHAVLLGDATEAGSGWHEMGLLDFSYSFLLRAGYLTLYGIEALPRTHESQ  183 (498)
T ss_dssp             ---------------------HHHHHHHHHHHHHHHHHHHHHCSSCEEEEHHHHHHHHHHHHHHHHHHCBSCSSCCHHHH
T ss_pred             ---------------------HHHHHHHHHHHHHHhhcccccCCCcceecHHHHHHHHHHHHHHHhhcCcccccccccch
Confidence                                 77777777777666654321   345688999999999999999999987743221   


Q ss_pred             --HHHHHHhhHHHHhhhhhhhccccccc-cccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHh
Q 012950          154 --IFNKLTNMSFLASRNAYKIKIPLIGD-FVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKA  230 (452)
Q Consensus       154 --~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~  230 (452)
                        ....+......+.  .....+|++.. +++....+...+..+.    +.+.+.+...  ....   ...|+++.+++.
T Consensus       184 ~~~~~~~~~~~~~~~--~~~~~~p~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~--~~~~---~~~d~l~~ll~~  252 (498)
T 3b6h_A          184 AQDRVHSADVFHTFR--QLDRLLPKLARGSLSVGDKDHMCSVKSR----LWKLLSPARL--ARRA---HRSKWLESYLLH  252 (498)
T ss_dssp             HHHHHHHHHHHHHHH--HHHHHHHHHHHTCCCHHHHHHHHHHHHH----HHHHTCHHHH--TTCB---SCCHHHHHHHHH
T ss_pred             hhHHHhhHHHHHHHH--HHHhhHHHHHHHhcCchhhHHHHHHHHH----HHHHHHHHHH--hccc---cHHHHHHHHHHH
Confidence              1111222221111  11233453312 1111111122222222    2222221111  1111   457999999876


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCC--------CCChhhcccc
Q 012950          231 YHDPDMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQK--------NPAPDGIGKL  302 (452)
Q Consensus       231 ~~~~~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~--------~~~~~~~~~l  302 (452)
                      ..+.   ..++++++. .++.+++||++||+++++|++++|++||++|++|++||++++++.        .++.+++.+|
T Consensus       253 ~~~~---~~~~~~~~~-~~~~~l~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~~~~~~~~~~~~~~l~~l  328 (498)
T 3b6h_A          253 LEEM---GVSEEMQAR-ALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQKVLDST  328 (498)
T ss_dssp             HHHT---TCCHHHHHH-HHHHHHHHHHTTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHC----------CCTHHHHSC
T ss_pred             HHhC---CCCHHHHHH-HHHHHHHHhhhchHHHHHHHHHHHHcCHHHHHHHHHHHHHHhcccCCCCCcccccCHHHHhcC
Confidence            4332   236777777 888899999999999999999999999999999999999999853        2589999999


Q ss_pred             HHHHHHHHHhhcCCCCCCCccccccceeec-----CCeeeCCCcEEEecccc-cccCCCCCCCCCCCcCCCCCCCccccC
Q 012950          303 KTMSMVINESLRLYPPAVNISRNVEREVRL-----GKYILPANMELVIPILA-IHHDPQIWGEDVDLFKPERFADGVAKA  376 (452)
Q Consensus       303 p~l~a~i~E~lRl~p~~~~~~r~~~~d~~l-----~g~~Ip~g~~v~~~~~~-~~~d~~~~g~~p~~F~P~Rfl~~~~~~  376 (452)
                      |||+|||+|+||++|+ +..+|.+.+|+++     +||.|||||.|+++.|+ +||||++| +||++|+||||++.++..
T Consensus       329 pyl~a~i~E~lRl~p~-~~~~R~~~~d~~~~~~~g~g~~ip~Gt~v~~~~~~~~~~d~~~~-~~p~~F~PeRfl~~~~~~  406 (498)
T 3b6h_A          329 PVLDSVLSESLRLTAA-PFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIY-TDPEVFKYNRFLNPDGSE  406 (498)
T ss_dssp             HHHHHHHHHHHHHHBC-BCEEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTS-SSTTSCCTTTTBCTTSSB
T ss_pred             HHHHHHHHHHHhccCC-CcceeeecCCeeeecCCCCeEEeCCCCEEEeCchHhhcCCcccc-CChhhcCcccccCCCccc
Confidence            9999999999999985 6679999999988     68999999999999999 99999999 999999999999653321


Q ss_pred             C-------CCCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhcEEEeCCCCcCCC------ceeeEeecCCCceEEE
Q 012950          377 S-------NNTPAAFLPFSSGPRICVGLNFAATEAKIALSMILQRYRFNLSPSYVHSP------VLVVTLRPQHGLQVIF  443 (452)
Q Consensus       377 ~-------~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~------~~~~~~~p~~~~~v~~  443 (452)
                      .       ...+..++|||+|+|.|+|++||.+|+++++|.|+++|+|++.++....+      ....+..|..+++|.+
T Consensus       407 ~~~~~~~~~~~~~~~~pFg~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  486 (498)
T 3b6h_A          407 KKDFYKDGKRLKNYNMPWGAGHNHCLGRSYAVNSIKQFVFLVLVHLDLELINADVEIPEFDLSRYGFGLMQPEHDVPVRY  486 (498)
T ss_dssp             CCCCEETTEECSCSCCTTEETTEECSSHHHHHHHHHHHHHHHHHTEEEEESSTTCCCCCBCGGGTBSSBCCBSSCCEEEE
T ss_pred             ccccccccccCCcceeccCCCCCCCCcHHHHHHHHHHHHHHHHHHceeEeCCCCCCCCCCCccccccccCCCCCCccEEE
Confidence            0       01356899999999999999999999999999999999999976521111      2233457778899999


Q ss_pred             EEccc
Q 012950          444 QPLSV  448 (452)
Q Consensus       444 ~~r~~  448 (452)
                      ++|.-
T Consensus       487 ~~~~~  491 (498)
T 3b6h_A          487 RIRPH  491 (498)
T ss_dssp             EECCC
T ss_pred             Eeccc
Confidence            98863


No 48 
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=100.00  E-value=2e-57  Score=443.91  Aligned_cols=355  Identities=18%  Similarity=0.224  Sum_probs=288.0

Q ss_pred             Cceeeec-cCcceEEeCCHHHHHHHHhcCCCCCCCCCch-hh---HHh-hhcCceeccCCccHHHHHhhhccccchhhhh
Q 012950            1 MNFLTWY-GSRAQLVITQPELIKEILSNSDGTYPKVQAP-GF---LRK-ILGDGLVTAGGENWHRQRKLATLAFYAESLR   74 (452)
Q Consensus         1 ~~~~~~~-g~~~~vvv~~p~~~~~il~~~~~~f~~~~~~-~~---~~~-~~g~~l~~~~~~~w~~~Rr~~~~~f~~~~l~   74 (452)
                      |||++++ |+.+.++++||+++++|+.++  .|.+++.. ..   +.. ..+.++++.+|+.|+++||++.++|++++++
T Consensus        51 pv~~~~~~g~~~~vvv~~~~~i~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~l~~~fs~~~l~  128 (417)
T 2y5n_A           51 PVSRVRPPYGEEAWLVTRYEDVRAVLGDG--RFVRGPSMTRDEPRTRPEMVKGGLLSMDPPEHSRLRRLVVKAFTARRAE  128 (417)
T ss_dssp             SEEEEECSBSCCEEEECSHHHHHHHHTCT--TEESGGGGTSCCCBSSSSCCCCSGGGCCTTHHHHHHHHHHHHSCHHHHH
T ss_pred             CeEeeccCCCceEEEECCHHHHHHHHcCC--CcccCccccccccccCcccccccCccCCchHHHHHHHHHhhhcCHHHHH
Confidence            6899997 899999999999999999874  46554321 11   112 1356788899999999999999999999999


Q ss_pred             hhcchhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCc-eeehhhhH-HHHHHHHHHHhhcCCCccchh
Q 012950           75 VTKSNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGK-EIEVSQEF-KLLTSEIISRTAFGSSYLEGE  152 (452)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~-~~d~~~~~-~~~~~~~i~~~~fG~~~~~~~  152 (452)
                                                .+.+.+.+.++.+++.|..  ++ ++|+...+ ..+++++|+. +||.++++.+
T Consensus       129 --------------------------~~~~~i~~~~~~ll~~l~~--~~~~vdl~~~~~~~~~~~vi~~-~~G~~~~~~~  179 (417)
T 2y5n_A          129 --------------------------SLRPRAREIAHELVDQMAA--TGQPADLVAMFARQLPVRVICE-LLGVPSADHD  179 (417)
T ss_dssp             --------------------------HTHHHHHHHHHHHHHHHHH--HCSSEEHHHHTTTTHHHHHHHH-HHTCCGGGHH
T ss_pred             --------------------------HHHHHHHHHHHHHHHHHHh--CCCCeeHHHHHHHHhHHHHHHH-HcCCCHHHHH
Confidence                                      9999999999999999975  34 89998766 4699999998 6998876432


Q ss_pred             hHHHHHHhhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHhcC
Q 012950          153 SIFNKLTNMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKAYH  232 (452)
Q Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~  232 (452)
                      .+......       .     +... .    ...++..++.+.+.+++.+.++++++.        ..+|+++.|++...
T Consensus       180 ~~~~~~~~-------~-----~~~~-~----~~~~~~~~~~~~l~~~~~~~i~~r~~~--------~~~dll~~ll~~~~  234 (417)
T 2y5n_A          180 RFTRWSGA-------F-----LSTA-E----VTAEEMQEAAEQAYAYMGDLIDRRRKE--------PTDDLVSALVQARD  234 (417)
T ss_dssp             HHHHHHHT-------T-----STTC-C----CCHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHHCCB
T ss_pred             HHHHHHHH-------H-----hccc-C----CCHHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHhhhc
Confidence            22211111       0     0000 0    112355667778888888888887652        34799999998643


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHHHHHHHHHh
Q 012950          233 DPDMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKTMSMVINES  312 (452)
Q Consensus       233 ~~~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~  312 (452)
                      +   +..++++++++++..+++||+|||+++++|++++|++||++|+++++|+                 .||+|||+|+
T Consensus       235 ~---~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~-----------------~~l~a~i~E~  294 (417)
T 2y5n_A          235 Q---QDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLLDRP-----------------ELIPSAVEEL  294 (417)
T ss_dssp             T---TBCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCG-----------------GGHHHHHHHH
T ss_pred             c---CCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCH-----------------HHHHHHHHHH
Confidence            2   3469999999999999999999999999999999999999999999984                 4799999999


Q ss_pred             hcCCCCCC--CccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcccccCCC
Q 012950          313 LRLYPPAV--NISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPFSSG  390 (452)
Q Consensus       313 lRl~p~~~--~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G  390 (452)
                      ||++|+++  ..+|.+.+|++++||.||||+.|+++.+++||||++| +||++|+||||.           ..++|||.|
T Consensus       295 lRl~p~~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~~~lpFG~G  362 (417)
T 2y5n_A          295 TRWVPLGVGTAFPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQF-PDADRIDVDRTP-----------NQHLGFGHG  362 (417)
T ss_dssp             HHHCCCBSSCCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTS-TTTTSCCTTCSS-----------CCCCTTCCS
T ss_pred             HHhcCCccccccceEeCCCEEECCEEECCCCEEEeChhhhCCCcccC-CCccccCCCCCC-----------CCcCCCCCC
Confidence            99999999  6799999999999999999999999999999999999 999999999983           258999999


Q ss_pred             CCCCcchHHHHHHHHHHHHHHHhhc-EEEeCCCC-cCCCceeeEeecCCCceEEE
Q 012950          391 PRICVGLNFAATEAKIALSMILQRY-RFNLSPSY-VHSPVLVVTLRPQHGLQVIF  443 (452)
Q Consensus       391 ~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~-~~~~~~~~~~~p~~~~~v~~  443 (452)
                      +|.|+|++||.+|++++++.|+++| ++++.++. ........++++...++|.|
T Consensus       363 ~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~  417 (417)
T 2y5n_A          363 VHHCLGAPLARVELQVALEVLLQRLPGIRLGIPETQLRWSEGMLLRGPLELPVVW  417 (417)
T ss_dssp             TTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCCCSSBCCBSCCEEEC
T ss_pred             CcCCcCHHHHHHHHHHHHHHHHHhCCCcEeCCCCccceeccCcccCCcceeEEeC
Confidence            9999999999999999999999999 69987531 22222234456667787764


No 49 
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=100.00  E-value=2.6e-58  Score=449.31  Aligned_cols=357  Identities=15%  Similarity=0.210  Sum_probs=291.4

Q ss_pred             CceeeeccC--cceEEeCCHHHHHHHHhcCCCCCCCCCchh----hHHhh--h-cCceeccCCccHHHHHhhhccccchh
Q 012950            1 MNFLTWYGS--RAQLVITQPELIKEILSNSDGTYPKVQAPG----FLRKI--L-GDGLVTAGGENWHRQRKLATLAFYAE   71 (452)
Q Consensus         1 ~~~~~~~g~--~~~vvv~~p~~~~~il~~~~~~f~~~~~~~----~~~~~--~-g~~l~~~~~~~w~~~Rr~~~~~f~~~   71 (452)
                      |||++++++  .+.+++++|+.+++|+.+.  .|++.....    .+...  + +.++++.+++.|+++||++.++|+++
T Consensus        41 pv~~~~~~~g~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~~~~~fs~~  118 (411)
T 2dkk_A           41 PLTRVRLPHGEGWAWLATRYDDVKAITNDP--RFGRAEVTQRQITRLAPHFKPRPGSLAFADQPDHNRLRRAVAGAFTVG  118 (411)
T ss_dssp             SEEEEECSBSBSCEEEECSHHHHHHHTTCT--TEESGGGGGSCBCBSSSCCCCCTTCSTTCCTTHHHHHHHHHGGGSSHH
T ss_pred             CeEeeecCCCceeEEEEcCHHHHHHHHcCC--CcccCCCCCCCccccccchhccccccccCCchHHHHHHHHhhHhhCHH
Confidence            578888765  8899999999999999863  576654321    12222  1 56788889999999999999999999


Q ss_pred             hhhhhcchhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhHH-HHHHHHHHHhhcCCCccc
Q 012950           72 SLRVTKSNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEFK-LLTSEIISRTAFGSSYLE  150 (452)
Q Consensus        72 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~~-~~~~~~i~~~~fG~~~~~  150 (452)
                      +++                          .+.+.+.+.++++++.|... ++++|+...+. .+++++|+. +||.++++
T Consensus       119 ~l~--------------------------~~~~~i~~~~~~l~~~l~~~-g~~~dl~~~~~~~~~~~vi~~-l~G~~~~~  170 (411)
T 2dkk_A          119 ATK--------------------------RLRPRAQEILDGLVDGILAE-GPPADLVERVLEPFPIAVVSE-VMGVPAAD  170 (411)
T ss_dssp             HHH--------------------------HHHHHHHHHHHHHHHHHHHH-CSCEEHHHHTTTHHHHHHHHH-HHTCCSSH
T ss_pred             HHH--------------------------HHHHHHHHHHHHHHHHHHhc-CCCeehHHHHHHHHHHHHHHH-HhCCCHHH
Confidence            999                          99999999999999999763 34899997775 699999998 59998764


Q ss_pred             hhhHHHHHHhhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHh
Q 012950          151 GESIFNKLTNMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKA  230 (452)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~  230 (452)
                      .+.+......       .     +.    ..+  ...+..++.+.+.+++.+.++++++.        ..+|+++.|++.
T Consensus       171 ~~~~~~~~~~-------~-----~~----~~~--~~~~~~~~~~~l~~~~~~~i~~r~~~--------~~~dll~~ll~~  224 (411)
T 2dkk_A          171 RERVHSWTRQ-------I-----IS----TSG--GAEAAERAKRGLYGWITETVRARAGS--------EGGDVYSMLGAA  224 (411)
T ss_dssp             HHHHHHHHGG-------G-----CS----SCS--CSHHHHHHHHHHHHHHHHHHHTTTTC--------CSSCHHHHHHHH
T ss_pred             HHHHHHHHHH-------H-----Hh----ccc--hHHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHHh
Confidence            3222111110       0     00    011  23455667777888888887766531        346999999987


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHHHHHHHH
Q 012950          231 YHDPDMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKTMSMVIN  310 (452)
Q Consensus       231 ~~~~~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~  310 (452)
                       .+   +..++++++++++..+++|| |||+++++|++++|++||++|++|++|+                 .||+|||+
T Consensus       225 -~~---~~~ls~~el~~~~~~l~~AG-eTta~~l~~~l~~L~~~P~~~~~l~~E~-----------------~~l~a~i~  282 (411)
T 2dkk_A          225 -VG---RGEVGETEAVGLAGPLQIGG-EAVTHNVGQMLYLLLTRRELMARMRERP-----------------GARGTALD  282 (411)
T ss_dssp             -HH---TTSSCTTSHHHHHHHHHHTH-HHHHHHHHHHHHHHHHSHHHHHHHHHCT-----------------TCCHHHHH
T ss_pred             -cC---CCCCCHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHhCHHHHHHHHhCH-----------------HHHHHHHH
Confidence             21   34689999999999999999 9999999999999999999999999995                 37899999


Q ss_pred             HhhcCCCCCC-C-ccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcccccC
Q 012950          311 ESLRLYPPAV-N-ISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPFS  388 (452)
Q Consensus       311 E~lRl~p~~~-~-~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg  388 (452)
                      |+||++|+++ . .+|++.+|++++||.||||+.|+++.+++||||++| +||++|+||||.           ..++|||
T Consensus       283 E~lRl~p~~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f-~dp~~F~PeR~~-----------~~~l~FG  350 (411)
T 2dkk_A          283 ELLRWISHRTSVGLARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVF-PDPDRIDLDRDP-----------NPHLAYG  350 (411)
T ss_dssp             HHHHHSCCBSSCCCCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCCSCSS-----------CCCCTTC
T ss_pred             HHHhhCCccccCccceEECCCEEECCEEECCCCEEEeChhhhcCChhhC-CCCCCCCCCCCC-----------CCCCCCC
Confidence            9999999999 7 899999999999999999999999999999999999 999999999995           2589999


Q ss_pred             CCCCCCcchHHHHHHHHHHHHHHHhhc-EEEeCCCC-cCCCceeeEeecCCCceEEEEEcc
Q 012950          389 SGPRICVGLNFAATEAKIALSMILQRY-RFNLSPSY-VHSPVLVVTLRPQHGLQVIFQPLS  447 (452)
Q Consensus       389 ~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~-~~~~~~~~~~~p~~~~~v~~~~r~  447 (452)
                      .|+|.|+|++||.+|++++++.|+++| ++++.++. ........++++..+++|.+++|+
T Consensus       351 ~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~~~R~  411 (411)
T 2dkk_A          351 NGHHFCTGAVLARMQTELLVDTLLERLPGLRLAVPAEQVAWRRKTMIRGPRTLPCTWHHHH  411 (411)
T ss_dssp             CSTTSCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGGGCCBCCSSSBCCBSCCEEECCCCC
T ss_pred             CCCCCCcCHHHHHHHHHHHHHHHHHHCCCcEECCCccccccccCcccCCcceeEEEeccCC
Confidence            999999999999999999999999999 89997642 222222345677789999999874


No 50 
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=100.00  E-value=1.4e-57  Score=449.58  Aligned_cols=369  Identities=15%  Similarity=0.144  Sum_probs=290.0

Q ss_pred             Cce--eee-ccCcceEEeCCHHHHHHHHhcCCCCCCCCCchhh----HH-----h------hhcCceeccCCccHHHHHh
Q 012950            1 MNF--LTW-YGSRAQLVITQPELIKEILSNSDGTYPKVQAPGF----LR-----K------ILGDGLVTAGGENWHRQRK   62 (452)
Q Consensus         1 ~~~--~~~-~g~~~~vvv~~p~~~~~il~~~~~~f~~~~~~~~----~~-----~------~~g~~l~~~~~~~w~~~Rr   62 (452)
                      ||+  .++ +|+.++++|++++.+++++.++ ..|++++....    ..     .      ..+.++++.+|+.|+++||
T Consensus        59 PV~~~~~~~~g~~~~~vvt~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~l~~~dg~~h~~~R~  137 (450)
T 3tkt_A           59 PVAKVVAPDDEHEPFWLVSSFDGVMKASKDN-ATFLNNPKSTVFTLRVGEMMAKAITGGSPHLVESLVQMDAPKHPKLRR  137 (450)
T ss_dssp             SEEEECCTTCSSCCEEEECSHHHHHHHHHCT-TTEESSSSCSSCCCHHHHHHHHHHHTSCSCSSCCGGGCCTTHHHHHHH
T ss_pred             CeecccccCCCCCCEEEEecHHHHHHHHhCc-ccccCCCccccccccccccccccccccccccccCcccCCCHHHHHHHH
Confidence            567  777 7889999999999999999876 47754432111    10     0      1335788899999999999


Q ss_pred             hhccccchhhhhhhcchhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhH-HHHHHHHHHH
Q 012950           63 LATLAFYAESLRVTKSNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEF-KLLTSEIISR  141 (452)
Q Consensus        63 ~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~-~~~~~~~i~~  141 (452)
                      +++++|++++++                          .+.+.+.++++.+++.+... ++++|+...+ ..+++++|+.
T Consensus       138 ~~~~~fs~~~l~--------------------------~~~~~i~~~~~~ll~~l~~~-~~~~dl~~~~~~~~~~~vi~~  190 (450)
T 3tkt_A          138 LTQDWFMPKNLA--------------------------RLDGEIRKIANEAIDRMLGA-GEEGDFMALVAAPYPLHVVMQ  190 (450)
T ss_dssp             HHHTTTSHHHHG--------------------------GGHHHHHHHHHHHHHHHHHT-CSEEEHHHHTTTHHHHHHHHH
T ss_pred             HhhhhhCHHHHH--------------------------HHHHHHHHHHHHHHHHHHhc-CCCEeeHHHHHHHHHHHHHHH
Confidence            999999999999                          99999999999999999763 5789998887 6899999999


Q ss_pred             hhcCCCccchhhHHHHHHhhHHHHhhhhhhhcccccccccc--CCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q 012950          142 TAFGSSYLEGESIFNKLTNMSFLASRNAYKIKIPLIGDFVK--TSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGY  219 (452)
Q Consensus       142 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~  219 (452)
                      + ||.+.++.+.+......+.    ........++. .++.  ....++..+..+.+.+++.+.++++++.        .
T Consensus       191 l-~G~~~~~~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~  256 (450)
T 3tkt_A          191 I-LGVPPEDEPKMLFLTQQMF----GGQDEDMNKSG-LKDLPPEQISQIVAGAVAEFERYFAGLAAERRRN--------P  256 (450)
T ss_dssp             H-TTCCGGGHHHHHHHHHTTS----CCC-----------------HHHHHHHHHHHHHHHHHHHHHHHHHS--------C
T ss_pred             H-cCCChhHHHHHHHHHHHHh----ccccchhhccc-cccccchhHHHHHHHHHHHHHHHHHHHHHHHHhC--------C
Confidence            6 8987654333332222211    11111111211 1111  1223456677778888888888887653        4


Q ss_pred             CCcHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhc
Q 012950          220 GNDYFGLLLKAYHDPDMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGI  299 (452)
Q Consensus       220 ~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~  299 (452)
                      .+|+++.|++...+   +..+++++++++++.+++||+|||+++++|++++|++||++|++|++|+              
T Consensus       257 ~~dll~~ll~~~~~---~~~ls~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~--------------  319 (450)
T 3tkt_A          257 TDDVATVIANAVVD---GEPMSDRDTAGYYIITASAGHDTTSASSAGAALALARDPDLFARVKADR--------------  319 (450)
T ss_dssp             CSSHHHHHHTCEET---TEECCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHCG--------------
T ss_pred             CCCHHHHHHhcccc---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHCH--------------
Confidence            57999999986542   3469999999999999999999999999999999999999999999994              


Q ss_pred             cccHHHHHHHHHhhcCCCCCCCccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCC
Q 012950          300 GKLKTMSMVINESLRLYPPAVNISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNN  379 (452)
Q Consensus       300 ~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~  379 (452)
                         +|++|||+|+||++|+++..+|.+.+|++++||.||||+.|+++.+++||||++| +||++|+||||-         
T Consensus       320 ---~~l~a~i~E~LRl~pp~~~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~~-~dP~~F~PeR~~---------  386 (450)
T 3tkt_A          320 ---NLLPGIVEEAIRWTTPVQHFMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQF-PEPRKFDPTRPA---------  386 (450)
T ss_dssp             ---GGHHHHHHHHHHHHCSBCEEEEEESSSEEETTEEECTTCEEEEEHHHHHTCTTTS-SSTTSCCTTSCT---------
T ss_pred             ---HHHHHHHHHHHHhCCCccCcceeeCCCeeECCEEECCCCEEEEChHHhcCChhhC-CCcCeeCCCCCC---------
Confidence               5899999999999999997799999999999999999999999999999999999 999999999942         


Q ss_pred             CCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhcE-EEeCCCCcCCCceeeEeecCCCceEEEEE
Q 012950          380 TPAAFLPFSSGPRICVGLNFAATEAKIALSMILQRYR-FNLSPSYVHSPVLVVTLRPQHGLQVIFQP  445 (452)
Q Consensus       380 ~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~p~~~~~v~~~~  445 (452)
                        ..++|||.|+|.|+|++||.+|++++++.|+++|+ +++.+......  ...++....++|.+++
T Consensus       387 --~~~l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~--~~~~~g~~~lpv~~~~  449 (450)
T 3tkt_A          387 --NRHLAFGAGSHQCLGLHLARLEMRVLLDVLLDRVDSLELAGEPKRVN--STFVGGFKSLPMRWKA  449 (450)
T ss_dssp             --TCSSTTCCSTTCCTTHHHHHHHHHHHHHHHHHHEEEEEESSCCEECC--CSSBCCEEECEEEEEE
T ss_pred             --CCCCCCCCcCccCccHHHHHHHHHHHHHHHHHhCCCceeCCCccccc--CcccCCcccceEEEec
Confidence              25899999999999999999999999999999997 78764322211  1233444578888875


No 51 
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=100.00  E-value=9.4e-58  Score=445.85  Aligned_cols=357  Identities=17%  Similarity=0.270  Sum_probs=286.8

Q ss_pred             Cceeeec-cCcceEEeCCHHHHHHHHhcCCCCCCCCCc-hh-----hHHhhh-----cCc-eeccCCccHHHHHhhhccc
Q 012950            1 MNFLTWY-GSRAQLVITQPELIKEILSNSDGTYPKVQA-PG-----FLRKIL-----GDG-LVTAGGENWHRQRKLATLA   67 (452)
Q Consensus         1 ~~~~~~~-g~~~~vvv~~p~~~~~il~~~~~~f~~~~~-~~-----~~~~~~-----g~~-l~~~~~~~w~~~Rr~~~~~   67 (452)
                      |||++++ |+.++++++||+++++|+.++  .|++++. ..     ......     +.+ +++.+|+.|+++||++.++
T Consensus        36 pv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~h~~~R~~~~~~  113 (413)
T 2z36_A           36 PINKVRLTSGGQAWWVSGHEEARAVLADG--RFSSDKRKDGFPLFTLDAATLQQLRSQPPLMLGMDGAEHSAARRPVIGE  113 (413)
T ss_dssp             SEEEEEETTSCEEEEECSHHHHHHHHHCT--TEECCTTSTTCCCSSCCHHHHHHHTTSCCCGGGCCHHHHHHHHHHHHGG
T ss_pred             CeeEeecCCCceEEEEecHHHHHHHHcCC--CcccCccccCccccccccccccccccccccccccCchHHHHHHHHHHHh
Confidence            6899997 899999999999999999873  5754331 11     012232     677 8888999999999999999


Q ss_pred             cchhhhhhhcchhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhHH-HHHHHHHHHhhcCC
Q 012950           68 FYAESLRVTKSNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEFK-LLTSEIISRTAFGS  146 (452)
Q Consensus        68 f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~~-~~~~~~i~~~~fG~  146 (452)
                      |++++++                          .+.+.+.+.++.+++.|.+..++++|+...+. .+++++++.+ ||.
T Consensus       114 fs~~~l~--------------------------~~~~~i~~~~~~ll~~l~~~~~~~~d~~~~~~~~~~~~vi~~~-~G~  166 (413)
T 2z36_A          114 FTVKRLA--------------------------ALRPRIQDIVDHFIDDMLATDQRPVDLVQALSLPVPSLVICEL-LGV  166 (413)
T ss_dssp             GSHHHHH--------------------------HHHHHHHHHHHHHHHHHTTCSCSSEEHHHHTTTHHHHHHHHHH-HTC
T ss_pred             hCHHHHH--------------------------HHHHHHHHHHHHHHHHHHHhcCCCccHHHHHhhhhHHHHHHHH-hCC
Confidence            9999999                          99999999999999999743357899986654 6899999995 998


Q ss_pred             CccchhhHHHHHHhhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHH
Q 012950          147 SYLEGESIFNKLTNMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGL  226 (452)
Q Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~  226 (452)
                      ++++.+.+..    +...        .+...   .+    ++..++.+.+.+++.+.++++++.        ..+|+++.
T Consensus       167 ~~~~~~~~~~----~~~~--------~~~~~---~~----~~~~~~~~~~~~~~~~~i~~r~~~--------~~~dll~~  219 (413)
T 2z36_A          167 PYTDHDFFQS----RTTM--------MVSRT---SM----EDRRRAFAELRAYIDDLITRKESE--------PGDDLFSR  219 (413)
T ss_dssp             CGGGHHHHHH----HHHH--------TTCSS---CH----HHHHHHHHHHHHHHHHHHHHHHSS--------CCSSHHHH
T ss_pred             CHHHHHHHHH----HHHH--------Hhccc---Cc----HHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHH
Confidence            7764322211    1111        01101   01    445566777888888888777642        34699999


Q ss_pred             HHHhcCCCCCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHHHH
Q 012950          227 LLKAYHDPDMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKTMS  306 (452)
Q Consensus       227 ll~~~~~~~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~  306 (452)
                      |++...+   +..++++++++++..+++||+|||+++++|++++|++||++|+++++|+                 .||+
T Consensus       220 ll~~~~~---~~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~-----------------~~l~  279 (413)
T 2z36_A          220 QIARQRQ---EGTLDHAGLVSLAFLLLTAGHETTANMISLGVVGLLSHPEQLTVVKANP-----------------GRTP  279 (413)
T ss_dssp             HHHHHHH---HSCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCG-----------------GGHH
T ss_pred             HHHhhcC---CCCCCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHhCHHHHHHHHhCh-----------------HHHH
Confidence            9986321   2468999999999999999999999999999999999999999999994                 4799


Q ss_pred             HHHHHhhcCCCCCC-CccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCccc
Q 012950          307 MVINESLRLYPPAV-NISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFL  385 (452)
Q Consensus       307 a~i~E~lRl~p~~~-~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~  385 (452)
                      |||+|+||++|+++ ..+|++.+|++++||.||||+.|+++.+++||||++| +||++|+||||.           ..++
T Consensus       280 a~i~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~~~l  347 (413)
T 2z36_A          280 MAVEELLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVF-KDPAVLDVERGA-----------RHHL  347 (413)
T ss_dssp             HHHHHHHHHHCTTTTCEEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCCC-----------CCCC
T ss_pred             HHHHHHHHhCCCcccceeeeeCCCEEECCEEECCCCEEEEChHhhcCChhhC-CCccccCCCCCC-----------CCCC
Confidence            99999999999999 6699999999999999999999999999999999999 999999999983           2489


Q ss_pred             ccCCCCCCCcchHHHHHHHHHHHHHHHhhc-EEEeCCCC-cCCCceeeEeecCCCceEEEEE
Q 012950          386 PFSSGPRICVGLNFAATEAKIALSMILQRY-RFNLSPSY-VHSPVLVVTLRPQHGLQVIFQP  445 (452)
Q Consensus       386 ~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~-~~~~~~~~~~~p~~~~~v~~~~  445 (452)
                      |||.|+|.|+|++||.+|++++++.|+++| ++++.++. .........++....++|.+..
T Consensus       348 ~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~g~~~lpv~~~~  409 (413)
T 2z36_A          348 AFGFGPHQCLGQNLARMELQIVFDTLFRRIPSLRLAVPMEDVPFKGDSVIYGVHELPVTWHH  409 (413)
T ss_dssp             TTCCSTTSCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGGGSCBCTTSSSCCBSCCEEECCC
T ss_pred             CCCCCCccCccHHHHHHHHHHHHHHHHHhCCCccccCCcccceecccccccCcceeeEEeec
Confidence            999999999999999999999999999999 58987641 2111222334555678877653


No 52 
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=100.00  E-value=4.2e-58  Score=457.79  Aligned_cols=395  Identities=18%  Similarity=0.218  Sum_probs=279.3

Q ss_pred             CceeeeccCcceEEeCCHHHHHHHHhcCCCCCCCCC-chhhHHhhhcCceeccCCccHHHHHhhhccccchhhhhhhcch
Q 012950            1 MNFLTWYGSRAQLVITQPELIKEILSNSDGTYPKVQ-APGFLRKILGDGLVTAGGENWHRQRKLATLAFYAESLRVTKSN   79 (452)
Q Consensus         1 ~~~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~~~-~~~~~~~~~g~~l~~~~~~~w~~~Rr~~~~~f~~~~l~~~~~~   79 (452)
                      |||++++|+.+++|++||+++++++.++. .|+... ....+...+|.+++..+++.|   |+++.++|++++++     
T Consensus        53 ~v~~~~~g~~~~vvv~~~~~~~~il~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~---R~~~~~~f~~~~l~-----  123 (475)
T 3b98_A           53 DIFTVRAAGLYITVLLDSNCYDAVLSDVA-SLDQTSYAQVLMKRIFNMILPSHNPESE---KKRAEMHFQGASLT-----  123 (475)
T ss_dssp             SEEEEEETTEEEEEECCTTTHHHHHTCTT-TEESHHHHHHHHHHTTCCCCTTCCHHHH---HHHHHHHTSHHHHH-----
T ss_pred             CeEEEEECCceEEEEeCHHHHHHHHcCcc-cCCchHHHHHHHHHHhCCCCCCCChHHH---HHHHHHHcChhhHH-----
Confidence            68999999999999999999999998754 343322 223344556777776777655   56777899999998     


Q ss_pred             hhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhc----CCceeehhhhHHHHHHHHHHHhhcCCCccchhhHH
Q 012950           80 CLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHS----EGKEIEVSQEFKLLTSEIISRTAFGSSYLEGESIF  155 (452)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~----~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~~~~~  155 (452)
                                           .+.+.+.+++..++..+...    .+..+++...+..+++++++...||.+....+.. 
T Consensus       124 ---------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-  181 (475)
T 3b98_A          124 ---------------------QLSNSMQNNLRLLMTPSEMGLKTSEWKKDGLFNLCYSLLFKTGYLTVFGAENNNSAAL-  181 (475)
T ss_dssp             ---------------------HHHHHHHHHHHHHSSTTTTTCSSCSCEEEEHHHHHHHHHHHHHHHHHHCCTTSCHHHH-
T ss_pred             ---------------------HHHHHHHHHHHHHHhhcccccCCCCceeehHHHHHHHHHHHHhhhheeCCccccchhc-
Confidence                                 89999999998888776432    2345778888888888888888888543221111 


Q ss_pred             HHHHhhHHHHhhhhhhhcccccc-ccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHhcCCC
Q 012950          156 NKLTNMSFLASRNAYKIKIPLIG-DFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKAYHDP  234 (452)
Q Consensus       156 ~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~  234 (452)
                         ..+...+..  ....+|++. .+++..    ..+......+.+.+.+.+..   ...  .....|+++.|++...+.
T Consensus       182 ---~~~~~~~~~--~~~~~p~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~d~l~~ll~~~~~~  247 (475)
T 3b98_A          182 ---TQIYEEFRR--FDKLLPKLARTTVNKE----EKQIASAAREKLWKWLTPSG---LDR--KPREQSWLGSYVKQLQDE  247 (475)
T ss_dssp             ---HHHHHHHHH--HHHHHHHHHTTCCCHH----HHHHHHHHHHHHHHHHSCTT---SCC--CCCTTSHHHHHHHHHHHT
T ss_pred             ---HHHHHHHHH--HHhhhHHHHHHhcChh----hhHHHHHHHHHHHHHHHHHH---hhc--cccccHHHHHHHHHHHHc
Confidence               111111111  112234321 111111    11111222222222221111   011  114579999999764322


Q ss_pred             CCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHHHHHHHHHhhc
Q 012950          235 DMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKTMSMVINESLR  314 (452)
Q Consensus       235 ~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lR  314 (452)
                         ..++++++. +++.+++||+|||+++++|++++|++||++|++|++|++  .+...++.+++++||||+|||+|+||
T Consensus       248 ---~~~~~~~i~-~~~~~l~ag~~TTa~~l~~~l~~L~~~P~~~~~l~~Ei~--~~~~~~~~~~~~~lpyl~a~i~E~lR  321 (475)
T 3b98_A          248 ---GIDAEMQRR-AMLLQLWVTQGNAGPAAFWVMGYLLTHPEALRAVREEIQ--GGKHLRLEERQKNTPVFDSVLWETLR  321 (475)
T ss_dssp             ---TCCHHHHHH-HHHHHHHHHHSSHHHHHHHHHHHHHTCHHHHHHHHHHHC--------------CCHHHHHHHHHHHH
T ss_pred             ---CCCHHHHHH-HHHHHHHHccccHHHHHHHHHHHHHcCHHHHHHHHHHHh--cCCCCCCHHHHhcCHHHHHHHHHHHh
Confidence               247788888 999999999999999999999999999999999999998  34456799999999999999999999


Q ss_pred             CCCCCCCccccccceeec-----CCeeeCCCcEEEecccc-cccCCCCCCCCCCCcCCCCCCCccccCC-------CCCC
Q 012950          315 LYPPAVNISRNVEREVRL-----GKYILPANMELVIPILA-IHHDPQIWGEDVDLFKPERFADGVAKAS-------NNTP  381 (452)
Q Consensus       315 l~p~~~~~~r~~~~d~~l-----~g~~Ip~g~~v~~~~~~-~~~d~~~~g~~p~~F~P~Rfl~~~~~~~-------~~~~  381 (452)
                      ++|+ +.++|.+.+|+++     +||.||||+.|+++.++ +||||++| +||++||||||++.+....       ....
T Consensus       322 l~p~-~~~~R~~~~d~~l~~~~g~g~~Ip~Gt~V~~~~~~~~~rdp~~~-~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~  399 (475)
T 3b98_A          322 LTAA-ALITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIH-QQPEMFQFDRFLNADRTEKKDFFKNGARVK  399 (475)
T ss_dssp             HHEE-ECEEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTS-SSTTSCCTTTTBCTTSCBCCCCBSSSCBCS
T ss_pred             cCCc-cceeEEecCCeEeecCCCCeEEECCCCEEEeCcHHHhcCChhhc-CCcccCCcchhcCCCCCccccccccccccc
Confidence            9986 6779999999999     88999999999999999 99999999 9999999999996533210       0135


Q ss_pred             CcccccCCCCCCCcchHHHHHHHHHHHHHHHhhcEEEeCCCCcCCC------ceeeEeecCCCceEEEEEccc
Q 012950          382 AAFLPFSSGPRICVGLNFAATEAKIALSMILQRYRFNLSPSYVHSP------VLVVTLRPQHGLQVIFQPLSV  448 (452)
Q Consensus       382 ~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~~~~~~~------~~~~~~~p~~~~~v~~~~r~~  448 (452)
                      ..++|||+|+|.|+|++||.+|++++++.|+++|+|+++++....+      ....+..|..+++|++++|..
T Consensus       400 ~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~R~~  472 (475)
T 3b98_A          400 YPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFDVELCDKNATVPLVDPSRYGFGILQPAGDLEIRYRIRFH  472 (475)
T ss_dssp             CSCCTTCSTTSCCTTHHHHHHHHHHHHHHHHHHEEEEESSTTCCCCCBCGGGTBEEECCBSSCCEEEEEEC--
T ss_pred             cCccCcCCCCCCCCCHHHHHHHHHHHHHHHHHhEEEEECCCCCCCCCCCcccccccccCCCCCceEEEEeccc
Confidence            6899999999999999999999999999999999999976531111      123466788899999999964


No 53 
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=100.00  E-value=6.4e-58  Score=446.88  Aligned_cols=358  Identities=18%  Similarity=0.221  Sum_probs=288.1

Q ss_pred             Cceeeec-cCcceEEeCCHHHHHHHHhcCCCCCCCCCc---hhh---HHh---hhcCceeccCCccHHHHHhhhccccch
Q 012950            1 MNFLTWY-GSRAQLVITQPELIKEILSNSDGTYPKVQA---PGF---LRK---ILGDGLVTAGGENWHRQRKLATLAFYA   70 (452)
Q Consensus         1 ~~~~~~~-g~~~~vvv~~p~~~~~il~~~~~~f~~~~~---~~~---~~~---~~g~~l~~~~~~~w~~~Rr~~~~~f~~   70 (452)
                      |||++++ |+.++|+++||+++++|+.++.  |++...   ...   +..   ..+.++++.+|+.|+++||++.++|++
T Consensus        38 pv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~h~~~R~~~~~~fs~  115 (408)
T 3abb_A           38 PLTQVTLFDGRPAWLITGHAEGRALLVDPR--LSSDWGHPDFPVVVRRTEDRGGLAFPLIGVDDPVHARQRRMLIPSFGV  115 (408)
T ss_dssp             SEEEEECTTSCEEEEECCHHHHHHHHTCTT--EECCTTSTTCCCCC---------CCTTTTCCTTHHHHHHHHHGGGGCH
T ss_pred             CeeeeecCCCCcEEEEeCHHHHHHHHcCCC--cccccccccccccccCCccccccccccccCCchHHHHHHHHhhhhcCH
Confidence            6899998 8899999999999999998643  433221   111   111   123578888999999999999999999


Q ss_pred             hhhhhhcchhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhHH-HHHHHHHHHhhcCCCcc
Q 012950           71 ESLRVTKSNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEFK-LLTSEIISRTAFGSSYL  149 (452)
Q Consensus        71 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~~-~~~~~~i~~~~fG~~~~  149 (452)
                      ++++                          .+.+.+.++++.+++.|.. .++++|+...+. .+++++|+. +||.+++
T Consensus       116 ~~l~--------------------------~~~~~i~~~~~~l~~~l~~-~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~  167 (408)
T 3abb_A          116 KRMN--------------------------AIRPRLQSLVDRLLDDMLA-KGPGADLVSAFALPVPSVAICE-LLGVPYG  167 (408)
T ss_dssp             HHHH--------------------------HHHHHHHHHHHHHHHHHHH-TCSCEEHHHHTTTHHHHHHHHH-HHTCCGG
T ss_pred             HHHH--------------------------HHHHHHHHHHHHHHHHHHh-cCCCeehHHHHHHHHHHHHHHH-HhCCCHH
Confidence            9999                          9999999999999999975 356899998876 488999997 6999876


Q ss_pred             chhhHHHHHHhhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHH
Q 012950          150 EGESIFNKLTNMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLK  229 (452)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~  229 (452)
                      +.+.+........    .      .+      . .  .+..++.+.+.+++.+.++++++.        ..+|+++.|++
T Consensus       168 ~~~~~~~~~~~~~----~------~~------~-~--~~~~~~~~~~~~~~~~~i~~r~~~--------~~~d~l~~ll~  220 (408)
T 3abb_A          168 DHDFFEECSRNFV----G------AA------T-S--AEADAAFGELYTYLHGLVGRKQAE--------PEDGLLDELIA  220 (408)
T ss_dssp             GHHHHHHHHHHHC-------------------------CCSSHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHH
T ss_pred             HHHHHHHHHHHHh----c------cc------c-h--HHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHh
Confidence            4333222211110    0      00      0 1  234456677888888888877652        34799999998


Q ss_pred             hcCCCCCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHHHHHHH
Q 012950          230 AYHDPDMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKTMSMVI  309 (452)
Q Consensus       230 ~~~~~~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i  309 (452)
                      ...+   +..++++++++++..+++||+|||+++++|++++|++||++|+++++|+                 .||+|||
T Consensus       221 ~~~~---~~~ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~-----------------~~l~a~i  280 (408)
T 3abb_A          221 RQLE---EGDLDHDEVVMIALVLLVAGHETTVNAIALGALTLIQHPEQIDVLLRDP-----------------GAVSGVV  280 (408)
T ss_dssp             HHHT---SSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGGGGGGSCH-----------------HHHHHHH
T ss_pred             cccC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhCH-----------------HhHHHHH
Confidence            6532   3469999999999999999999999999999999999999999999875                 3799999


Q ss_pred             HHhhcCCCCCCCccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcccccCC
Q 012950          310 NESLRLYPPAVNISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPFSS  389 (452)
Q Consensus       310 ~E~lRl~p~~~~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~  389 (452)
                      +|+||++|+++..+|++.+|++++||.||||+.|+++.|++||||++| +||++|+||||           ...++|||.
T Consensus       281 ~E~lRl~p~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dp~~F~PeR~-----------~~~~~~FG~  348 (408)
T 3abb_A          281 EELLRFTSVSDHIVRMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAY-ENPDIFDARRN-----------ARHHVGFGH  348 (408)
T ss_dssp             HHHHHHHCSSCEEEEEESSCEEETTEEECTTCEEEEEHHHHHTCTTTS-SSTTSCCTTSC-----------CTTCCTTCC
T ss_pred             HHHHHhcCcccccceEeCCCeEECCEEECCCCEEEeChHHhcCCcccC-CCcccCCCCCC-----------CCCCCCCCC
Confidence            999999999997799999999999999999999999999999999999 99999999996           125899999


Q ss_pred             CCCCCcchHHHHHHHHHHHHHHHhhc-EEEeCCC-CcCCCceeeEeecCCCceEEEEEcc
Q 012950          390 GPRICVGLNFAATEAKIALSMILQRY-RFNLSPS-YVHSPVLVVTLRPQHGLQVIFQPLS  447 (452)
Q Consensus       390 G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~p~~~~~v~~~~r~  447 (452)
                      |+|.|+|++||++|++++++.|+++| ++++.++ .........+.++..+++|.+++|.
T Consensus       349 G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~lpv~~~~~~  408 (408)
T 3abb_A          349 GIHQCLGQNLARAELEIALGGLFARIPGLRLAVPLDEVPIKAGHDAQGPIELPVVWHHHH  408 (408)
T ss_dssp             GGGCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGSCBCCTTSCCSBSCCEEECSCCC
T ss_pred             CCcCCcCHHHHHHHHHHHHHHHHHhCccceecCCccccccccCcccCCcceeEEEeCCCC
Confidence            99999999999999999999999999 8998643 1222222345677789999998763


No 54 
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=100.00  E-value=1.9e-57  Score=442.18  Aligned_cols=354  Identities=16%  Similarity=0.227  Sum_probs=284.9

Q ss_pred             CceeeeccCcceEEeCCHHHHHHHHhcCCCCCCCCCch--hhHHhhhcCceeccCCccHHHHHhhhccccchhhhhhhcc
Q 012950            1 MNFLTWYGSRAQLVITQPELIKEILSNSDGTYPKVQAP--GFLRKILGDGLVTAGGENWHRQRKLATLAFYAESLRVTKS   78 (452)
Q Consensus         1 ~~~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~~~~~--~~~~~~~g~~l~~~~~~~w~~~Rr~~~~~f~~~~l~~~~~   78 (452)
                      ||++++.|+ +.++++||+++++|+.++ +.|++++..  .......+.++++.+|+.|+++||++.++|++++++    
T Consensus        38 pv~~~~~~~-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~g~~h~~~R~~~~~~f~~~~l~----  111 (396)
T 3oft_A           38 GLVWSTANG-GHWIAARGDVVRELWGDA-ERLSSQCLAVTPGLGKVMQFIPLQQDGAEHKAFRTPVMKGLASRFVV----  111 (396)
T ss_dssp             SEEEECSTT-SEEEECSHHHHHHHHHCT-TTEESTTCCSSTTHHHHHCCTTTTCCHHHHHHHHHHHHHHTCHHHHH----
T ss_pred             CeeeecCCC-CEEEEcCHHHHHHHHcCc-ccccCCcccCCCccccccccCccccCCcHHHHHHHHhhhhhCHHHHH----
Confidence            578888874 589999999999999765 377554421  112222346778889999999999999999999999    


Q ss_pred             hhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhH-HHHHHHHHHHhhcCCCccchhhHHHH
Q 012950           79 NCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEF-KLLTSEIISRTAFGSSYLEGESIFNK  157 (452)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~  157 (452)
                                            .+.+.+.+.+..+++.|..  .+++|+...+ ..++.++++. +||.+.++.+.+...
T Consensus       112 ----------------------~~~~~i~~~~~~l~~~l~~--~~~~d~~~~~~~~~~~~v~~~-~~G~~~~~~~~~~~~  166 (396)
T 3oft_A          112 ----------------------ALEPKVQAVARKLMESLRP--RGSCDFVSDFAEILPLNIFLT-LIDVPLEDRPRLRQL  166 (396)
T ss_dssp             ----------------------HHHHHHHHHHHHHHHHHGG--GSEEEHHHHTTTTHHHHHHHH-HTTCCGGGHHHHHHH
T ss_pred             ----------------------HHHHHHHHHHHHHHHHhhh--cCCccHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHH
Confidence                                  9999999999999999986  4678987666 5566666665 689766543332221


Q ss_pred             HHhhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHhcCCCCCC
Q 012950          158 LTNMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKAYHDPDMT  237 (452)
Q Consensus       158 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~  237 (452)
                      ...+            +.       ........++.+.+.+++.+.++++++.        ..+|+++.|++...+   +
T Consensus       167 ~~~~------------~~-------~~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~d~l~~ll~~~~~---~  216 (396)
T 3oft_A          167 GVQL------------TR-------PDGSMTVEQLKQAADDYLWPFIEKRMAQ--------PGDDLFSRILSEPVG---G  216 (396)
T ss_dssp             HHHH------------HS-------CCSSCCHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHTSCBT---T
T ss_pred             HHHH------------hC-------CCCHHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHHhhcc---C
Confidence            1110            00       0112345677888899999999888764        457999999987443   3


Q ss_pred             CCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHHHHHHHHHhhcCCC
Q 012950          238 KRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKTMSMVINESLRLYP  317 (452)
Q Consensus       238 ~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p  317 (452)
                      ..++++++++++..+++||+|||+++++|++++|++||++|+++++|++                 ||+|||+|+||++|
T Consensus       217 ~~l~~~el~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~-----------------~l~a~i~E~lRl~p  279 (396)
T 3oft_A          217 RPWTVDEARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRLLRERPD-----------------LIPAAADELMRRYP  279 (396)
T ss_dssp             BCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG-----------------GHHHHHHHHHHHCC
T ss_pred             CCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH-----------------hHHHHHHHHHHhcC
Confidence            4699999999999999999999999999999999999999999999963                 89999999999999


Q ss_pred             CCCCccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcccccCCCCCCCcch
Q 012950          318 PAVNISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPFSSGPRICVGL  397 (452)
Q Consensus       318 ~~~~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~  397 (452)
                      ++ ..+|.+.+|++++||.||||+.|+++.+++||||++| +||++|+||||++         +..++|||.|+|.|+|+
T Consensus       280 ~~-~~~R~~~~d~~~~g~~Ip~G~~V~~~~~~~~rdp~~~-~dp~~F~PeR~~~---------~~~~~~FG~G~r~C~G~  348 (396)
T 3oft_A          280 TV-AVSRNAVADVDADGVTIRKGDLVYLPSVLHNLDPASF-EAPEEVRFDRGLA---------PIRHTTMGVGAHRCVGA  348 (396)
T ss_dssp             CB-EEEEEESSCEEETTEEECTTCEEEEETHHHHTCTTTS-SSTTSCCSCCCCC---------GGGSSTTCCGGGCCTTH
T ss_pred             cc-cCceecCCCEEECCEEECCCCEEEeChHHhCCCcccC-CCcCccCCCCCCC---------CCCcccCCCCCccCcCH
Confidence            99 7799999999999999999999999999999999999 9999999999973         34799999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhc-EEEeCCCCcCCCceeeEeecCCCceEEEE
Q 012950          398 NFAATEAKIALSMILQRY-RFNLSPSYVHSPVLVVTLRPQHGLQVIFQ  444 (452)
Q Consensus       398 ~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~p~~~~~v~~~  444 (452)
                      +||.+|++++++.|+++| ++++.++...... ....+....++|+|.
T Consensus       349 ~lA~~e~~~~l~~ll~~~~~~~l~~~~~~~~~-~~~~~~~~~lpv~~~  395 (396)
T 3oft_A          349 GLARMEVIVFLREWLGGMPEFALAPDKAVTMK-GGNVGACTALPLVWR  395 (396)
T ss_dssp             HHHHHHHHHHHHHHHHHSCCEEECSSSCCEEE-CSSBCEEEECEEEEC
T ss_pred             HHHHHHHHHHHHHHHHhCCCceECCCCCceec-cccccCcccceEEeC
Confidence            999999999999999999 9999876332211 122333345777663


No 55 
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=100.00  E-value=1.9e-57  Score=445.29  Aligned_cols=362  Identities=15%  Similarity=0.179  Sum_probs=290.4

Q ss_pred             CceeeeccCcceEEeCCHHHHHHHHhcCCCCCCCCCch--hhHHhhhcCceeccCCccHHHHHhhhccccchhhhhhhcc
Q 012950            1 MNFLTWYGSRAQLVITQPELIKEILSNSDGTYPKVQAP--GFLRKILGDGLVTAGGENWHRQRKLATLAFYAESLRVTKS   78 (452)
Q Consensus         1 ~~~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~~~~~--~~~~~~~g~~l~~~~~~~w~~~Rr~~~~~f~~~~l~~~~~   78 (452)
                      |||.+..++ +.++|+||+.+++|+.+. +.|+++...  .......+.++++.+|+.|+++||++.++|++++++    
T Consensus        54 pv~~~~~~~-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~dg~~h~~~R~~~~~~fs~~~l~----  127 (421)
T 3lxh_A           54 PLVWTPFTG-GHWIATRGTLIDEIYRSP-ERFSSRVIWVPREAGEAYDMVPTKLDPPEHTPYRKAIDKGLNLAEIR----  127 (421)
T ss_dssp             SEEEESSTT-SEEEECSHHHHHHHHTCT-TTEETTCCSSSHHHHHHCCCTTTTCCTTTHHHHHHHHHHHHSHHHHH----
T ss_pred             CeEeccCCC-CeEEEcCHHHHHHHHcCh-hhccCCcccCCcccccccccCCccCCcHHHHHHHHHHhhhcCHHHHH----
Confidence            478888766 599999999999999654 478655421  122222346788899999999999999999999999    


Q ss_pred             hhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhH-HHHHHHHHHHhhcCCCccchhhHHHH
Q 012950           79 NCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEF-KLLTSEIISRTAFGSSYLEGESIFNK  157 (452)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~  157 (452)
                                            .+.+.+.+.++.+++.|..  .+++|+...+ ..++.++++. +||.+.++.+.+...
T Consensus       128 ----------------------~~~~~i~~~~~~l~~~l~~--~~~~d~~~~~~~~~~~~v~~~-~~G~~~~~~~~~~~~  182 (421)
T 3lxh_A          128 ----------------------KLEDQIRTIAVEIIEGFAD--RGHCEFGSEFSTVFPVRVFLA-LAGLPVEDATKLGLL  182 (421)
T ss_dssp             ----------------------TTHHHHHHHHHHHHHTTTT--TSEEEHHHHTTTTHHHHHHHH-HHTCCGGGHHHHHHH
T ss_pred             ----------------------HHHHHHHHHHHHHHHHHhh--cCCeehHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHH
Confidence                                  9999999999999999975  5688976555 5577777776 589876543333222


Q ss_pred             HHhhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHhcCCCCCC
Q 012950          158 LTNMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKAYHDPDMT  237 (452)
Q Consensus       158 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~  237 (452)
                      ...    +.        ... .++|........+..+.+.+++.+.++++++.        ..+|+++.|++...+   +
T Consensus       183 ~~~----~~--------~~~-~~~p~~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~dll~~ll~~~~~---~  238 (421)
T 3lxh_A          183 ANE----MT--------RPS-GNTPEEQGRSLEAANKGFFEYVAPIIAARRGG--------SGTDLITRILNVEID---G  238 (421)
T ss_dssp             HHH----HH--------SCC-CSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--------CCCSHHHHHHTSCBT---T
T ss_pred             HHH----Hh--------ccc-cCCCchhHHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHhhhcc---C
Confidence            211    11        111 12333334566677888888888888877643        457999999987543   3


Q ss_pred             CCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHHHHHHHHHhhcCCC
Q 012950          238 KRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKTMSMVINESLRLYP  317 (452)
Q Consensus       238 ~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p  317 (452)
                      ..+++++++++++.+++||+|||+++++|++++|++||++|++|++|++                 ||+|||+|+||++|
T Consensus       239 ~~l~~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~-----------------~l~a~i~E~lRl~p  301 (421)
T 3lxh_A          239 KPMPDDRALGLVSLLLLGGLDTVVNFLGFMMIYLSRHPETVAEMRREPL-----------------KLQRGVEELFRRFA  301 (421)
T ss_dssp             BCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHCHH-----------------HHHHHHHHHHHHCC
T ss_pred             CCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH-----------------HHHHHHHHHHHhcC
Confidence            4699999999999999999999999999999999999999999999975                 78999999999999


Q ss_pred             CCCCccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcccccCCCCCCCcch
Q 012950          318 PAVNISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPFSSGPRICVGL  397 (452)
Q Consensus       318 ~~~~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~  397 (452)
                      ++ ..+|.+.+|++++||.||||+.|+++.+++||||++| +||++|+||||           ...++|||.|+|.|+|+
T Consensus       302 ~~-~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~-~dP~~F~PeR~-----------~~~~l~FG~G~r~C~G~  368 (421)
T 3lxh_A          302 VV-SDARYVVSDMEFHGTMLKEGDLILLPTALHGLDDRHH-DDPMTVDLSRR-----------DVTHSTFAQGPHRCAGM  368 (421)
T ss_dssp             CB-EEEEEECSCEEETTEEECTTCEEEEETHHHHTCTTTS-SSTTSCCTTCS-----------CCCCCTTCCGGGSCTTH
T ss_pred             cc-CCceeeCCCeeECCEEECCCCEEEEchhhhCCChhhC-CCcCeeCCCCC-----------CCCCCCCCCcCccCcCH
Confidence            99 7799999999999999999999999999999999999 99999999994           23699999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhc-EEEeCCCCcCCCceeeEeecCCCceEEEEEccc
Q 012950          398 NFAATEAKIALSMILQRY-RFNLSPSYVHSPVLVVTLRPQHGLQVIFQPLSV  448 (452)
Q Consensus       398 ~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r~~  448 (452)
                      +||.+|++++++.|+++| +|++.++....... ...+....++|+|+|+..
T Consensus       369 ~lA~~e~~~~l~~ll~~fp~~~l~~~~~~~~~~-~~~~~~~~lpv~~~p~~~  419 (421)
T 3lxh_A          369 HLARLEVTVMLQEWLARIPEFRLKDRAVPIYHS-GIVAAVENIPLEWEPQRV  419 (421)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCCEECTTCCCEEEC-SSBCEEECCEEECCCC--
T ss_pred             HHHHHHHHHHHHHHHHhCCCcEECCCCCceecc-ccccCceeeeEEEecccc
Confidence            999999999999999999 99998764332222 233444579999998864


No 56 
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=100.00  E-value=2.2e-57  Score=442.58  Aligned_cols=353  Identities=17%  Similarity=0.208  Sum_probs=284.2

Q ss_pred             Cceeeec-cCcc-eEEeCCHHHHHHHHhcCCCCCCCCCchhh----HHh-h--hcCceeccCCccHHHHHhhhccccchh
Q 012950            1 MNFLTWY-GSRA-QLVITQPELIKEILSNSDGTYPKVQAPGF----LRK-I--LGDGLVTAGGENWHRQRKLATLAFYAE   71 (452)
Q Consensus         1 ~~~~~~~-g~~~-~vvv~~p~~~~~il~~~~~~f~~~~~~~~----~~~-~--~g~~l~~~~~~~w~~~Rr~~~~~f~~~   71 (452)
                      |||++++ ++.+ +++|+||+.+++|+.+ . .|+++.....    +.. .  .+.++++.+|+.|+++||++.++|+++
T Consensus        38 pv~~~~~~~g~~p~~vv~~~~~v~~vl~~-~-~f~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~~~~~fs~~  115 (406)
T 1s1f_A           38 PVTRISLPNGEGWAWLVTRHDDVRLVTND-P-RFGREAVMDRQVTRLAPHFIPARGAVGFLDPPDHTRLRRSVAAAFTAR  115 (406)
T ss_dssp             SEEEEECSBSBSCEEEECSHHHHHHHHTC-T-TEESTTTTTTTBCBSSSSCSSCTTSGGGCCTTHHHHHHHHHHHHHSHH
T ss_pred             CeeeeccCCCcccEEEEcCHHHHHHHHcC-C-CccCCcCCCCCcccccccccccccccccCCchHHHHHHHHHHHhhCHH
Confidence            5788886 5666 9999999999999986 3 5765542211    111 2  367888899999999999999999999


Q ss_pred             hhhhhcchhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhH-HHHHHHHHHHhhcCCCccc
Q 012950           72 SLRVTKSNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEF-KLLTSEIISRTAFGSSYLE  150 (452)
Q Consensus        72 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~~~  150 (452)
                      +++                          .+.+.+.++++.+++.|.+ .++++|+...+ ..+++++|+. +||.++++
T Consensus       116 ~l~--------------------------~~~~~i~~~~~~l~~~l~~-~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~  167 (406)
T 1s1f_A          116 GVE--------------------------RVRERSRGMLDELVDAMLR-AGPPADLTEAVLSPFPIAVICE-LMGVPATD  167 (406)
T ss_dssp             HHH--------------------------HHHHHHHHHHHHHHHHHHH-HCSSEEHHHHTTTHHHHHHHHH-HHTCCGGG
T ss_pred             HHH--------------------------HHHHHHHHHHHHHHHHHHh-cCCCccHHHHHhhHhHHHHHHH-HhCCCHHH
Confidence            999                          9999999999999999973 25689998766 4799999998 59998765


Q ss_pred             hhhHHHHHHhhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHh
Q 012950          151 GESIFNKLTNMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKA  230 (452)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~  230 (452)
                      .+.+......+..    .    ..|          .++..++.+.+.+++.+.++++++.        ..+|+++.|++.
T Consensus       168 ~~~~~~~~~~~~~----~----~~~----------~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~d~l~~ll~~  221 (406)
T 1s1f_A          168 RHSMHTWTQLILS----S----SHG----------AEVSERAKNEMNAYFSDLIGLRSDS--------AGEDVTSLLGAA  221 (406)
T ss_dssp             HHHHHHHHHHHHH----H----HTT----------CCCCHHHHTHHHHHHHHHHHTSCCS--------CCCSHHHHHHHH
T ss_pred             HHHHHHHHHHHHh----c----cCC----------HHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHHh
Confidence            4333222211111    0    001          1234556677788888877765431        347999999986


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHHHHHHHH
Q 012950          231 YHDPDMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKTMSMVIN  310 (452)
Q Consensus       231 ~~~~~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~  310 (452)
                      ..+    ..++++++++++..+++|| |||+++++|++++|++||++|+++++|+                 .||+|||+
T Consensus       222 ~~~----~~ls~~el~~~~~~l~~AG-eTt~~~l~~~l~~L~~~P~~~~~l~~E~-----------------~~l~a~i~  279 (406)
T 1s1f_A          222 VGR----DEITLSEAVGLAVLLQIGG-EAVTNNSGQMFHLLLSRPELAERLRSEP-----------------EIRPRAID  279 (406)
T ss_dssp             HHT----TSSCHHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHSHHHHHHHHHCG-----------------GGHHHHHH
T ss_pred             hcc----cCCCHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHCHHHHHHHHhCH-----------------HHHHHHHH
Confidence            432    4689999999999999999 9999999999999999999999999995                 37999999


Q ss_pred             HhhcCCCCCC--CccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcccccC
Q 012950          311 ESLRLYPPAV--NISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPFS  388 (452)
Q Consensus       311 E~lRl~p~~~--~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg  388 (452)
                      |+||++|+++  ..+|.+.+|++++||.||||+.|+++.+++||||++| +||++|+||||.           ..++|||
T Consensus       280 E~lRl~p~~~~~~~~R~~~~d~~i~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~~~~~FG  347 (406)
T 1s1f_A          280 ELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVF-PDPDRIDFERSP-----------NPHVSFG  347 (406)
T ss_dssp             HHHHHSCCBSSCCCCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTC-------------CCCCTTC
T ss_pred             HHHhhCCCccccCcceEeCCCEEECCEEECCCCEEEeCcHHhcCCcccC-CCcceeCCCCCC-----------CCCCCCC
Confidence            9999999999  6799999999999999999999999999999999999 999999999995           2489999


Q ss_pred             CCCCCCcchHHHHHHHHHHHHHHHhhc-EEEeCCCC-cCCCceeeEeecCCCceEEE
Q 012950          389 SGPRICVGLNFAATEAKIALSMILQRY-RFNLSPSY-VHSPVLVVTLRPQHGLQVIF  443 (452)
Q Consensus       389 ~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~-~~~~~~~~~~~p~~~~~v~~  443 (452)
                      .|+|.|+|++||.+|++++++.|+++| ++++.++. .........+++..+++|.|
T Consensus       348 ~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~  404 (406)
T 1s1f_A          348 FGPHYCPGGMLARLESELLVDAVLDRVPGLKLAVAPEDVPFKKGALIRGPEALPVTW  404 (406)
T ss_dssp             CSTTCCTTHHHHHHHHHHHHHHHHHHSTTCEESSCGGGSCBCSSCSBCCBSCCEEEC
T ss_pred             CCCCCCcCHHHHHHHHHHHHHHHHHhCCCcEeCCCCccceeccCcccCCcceeEEee
Confidence            999999999999999999999999999 79997652 22122234567777888876


No 57 
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=100.00  E-value=4.9e-57  Score=441.00  Aligned_cols=356  Identities=18%  Similarity=0.250  Sum_probs=286.4

Q ss_pred             Cceeeec-cCcceEEeCCHHHHHHHHhcCCCCCCCCCc---hhhHH----hh--hcCceeccCCccHHHHHhhhccccch
Q 012950            1 MNFLTWY-GSRAQLVITQPELIKEILSNSDGTYPKVQA---PGFLR----KI--LGDGLVTAGGENWHRQRKLATLAFYA   70 (452)
Q Consensus         1 ~~~~~~~-g~~~~vvv~~p~~~~~il~~~~~~f~~~~~---~~~~~----~~--~g~~l~~~~~~~w~~~Rr~~~~~f~~   70 (452)
                      |||++++ |+.+.++|+||+++++||.++.  |++...   .....    ..  .+.++++.+|+.|+++||++.++|++
T Consensus        39 pv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~h~~~R~~~~~~fs~  116 (412)
T 2zbx_A           39 PLHRVTLYDGRQAWVVTKHEAARKLLGDPR--LSSNRTDDNFPATSPRFEAVRESPQAFIGLDPPEHGTRRRMTISEFTV  116 (412)
T ss_dssp             SEEEEECTTSCEEEEECSHHHHHHHHTCTT--EECCTTSTTSCCCSGGGC----CCCCGGGCCTTHHHHHHTTTGGGGSH
T ss_pred             CeEeeccCCCCcEEEEecHHHHHHHHcCcc--cccCcccccccccccccccccccccccccCCcHHHHHHHHHhhhhcCH
Confidence            6899998 8999999999999999998653  433221   01110    01  24578888999999999999999999


Q ss_pred             hhhhhhcchhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhHHH-HHHHHHHHhhcCCCcc
Q 012950           71 ESLRVTKSNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEFKL-LTSEIISRTAFGSSYL  149 (452)
Q Consensus        71 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~~~-~~~~~i~~~~fG~~~~  149 (452)
                      ++++                          .+.+.+.+.++.+++.|.. .++++|+...+.. +++++++. +||.+++
T Consensus       117 ~~l~--------------------------~~~~~i~~~~~~l~~~l~~-~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~  168 (412)
T 2zbx_A          117 KRIK--------------------------GMRPEVEEVVHGFLDEMLA-AGPTADLVSQFALPVPSMVICR-LLGVPYA  168 (412)
T ss_dssp             HHHH--------------------------HHHHHHHHHHHHHHHHHHH-HCSCEEHHHHTTTHHHHHHHHH-HHTCCGG
T ss_pred             HHHH--------------------------HHHHHHHHHHHHHHHHHHh-cCCCccHHHHHHHHHHHHHHHH-HcCCCHH
Confidence            9999                          9999999999999999975 2468999988864 88999997 6998876


Q ss_pred             chhhHHHHHHhhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHH
Q 012950          150 EGESIFNKLTNMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLK  229 (452)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~  229 (452)
                      +.+.+.......    ..      .+      +  . .+..+..+.+.+++.+.++++++.        ..+|+++.|++
T Consensus       169 ~~~~~~~~~~~~----~~------~~------~--~-~~~~~~~~~~~~~~~~~i~~r~~~--------~~~d~l~~ll~  221 (412)
T 2zbx_A          169 DHEFFQDASKRL----VQ------ST------D--A-QSALTARNDLAGYLDGLITQFQTE--------PGAGLVGALVA  221 (412)
T ss_dssp             GHHHHHHHHHHH----HH------CS------S--H-HHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHH
T ss_pred             HHHHHHHHHHHH----hc------cC------c--H-HHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHH
Confidence            433322221111    00      00      1  1 455667778888888888877652        34799999998


Q ss_pred             hcCCCCCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHHHHHHH
Q 012950          230 AYHDPDMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKTMSMVI  309 (452)
Q Consensus       230 ~~~~~~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i  309 (452)
                      ...+   +..++++++++++..+++||+|||+++++|++++|++||++|++|++|+                 .||+|||
T Consensus       222 ~~~~---~~~ls~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~-----------------~~l~a~i  281 (412)
T 2zbx_A          222 DQLA---NGEIDREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALRADR-----------------SLVPGAV  281 (412)
T ss_dssp             TTTT---TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCG-----------------GGHHHHH
T ss_pred             hccc---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhCh-----------------HhHHHHH
Confidence            7532   3469999999999999999999999999999999999999999999984                 4799999


Q ss_pred             HHhhcCCCCCC-CccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcccccC
Q 012950          310 NESLRLYPPAV-NISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPFS  388 (452)
Q Consensus       310 ~E~lRl~p~~~-~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg  388 (452)
                      +|+||++|+++ ..+|.+.+|++++||.||||+.|+++.|++||||++| +||++|+||||-           ..++|||
T Consensus       282 ~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~~~l~FG  349 (412)
T 2zbx_A          282 EELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVY-EDPDALDIHRSA-----------RHHLAFG  349 (412)
T ss_dssp             HHHHHHHCCCGGGCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTSCC-----------TTCCTTC
T ss_pred             HHHHHhCCccccccceeeCCCeEECCEEECCCCEEEeChhhhcCCcccc-CCccccCCCCCC-----------CCccCCC
Confidence            99999999999 5699999999999999999999999999999999999 999999999971           2589999


Q ss_pred             CCCCCCcchHHHHHHHHHHHHHHHhhc-EEEeCCCC-cCCCceeeEeecCCCceEEEEE
Q 012950          389 SGPRICVGLNFAATEAKIALSMILQRY-RFNLSPSY-VHSPVLVVTLRPQHGLQVIFQP  445 (452)
Q Consensus       389 ~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~-~~~~~~~~~~~p~~~~~v~~~~  445 (452)
                      .|+|.|+|++||++|++++++.|+++| ++++.++. ........+++....++|.+..
T Consensus       350 ~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~g~~~lpv~~~~  408 (412)
T 2zbx_A          350 FGVHQCLGQNLARLELEVILNALMDRVPTLRLAVPVEQLVLRPGTTIQGVNELPVTWHH  408 (412)
T ss_dssp             CSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGSCBCCTTSCCCBSCCEEECCC
T ss_pred             CCCCcCccHHHHHHHHHHHHHHHHHhcCcccccCCcccceeccccccCCcceeeeeccc
Confidence            999999999999999999999999999 79987431 2222222334555677777643


No 58 
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=100.00  E-value=1.6e-57  Score=442.60  Aligned_cols=332  Identities=14%  Similarity=0.256  Sum_probs=271.7

Q ss_pred             Cceeeecc-Cc---ceEEeCCHHHHHHHHhcCCCCCCCCCc-------h--hhHH-hhhcCceeccCCccHHHHHhhhcc
Q 012950            1 MNFLTWYG-SR---AQLVITQPELIKEILSNSDGTYPKVQA-------P--GFLR-KILGDGLVTAGGENWHRQRKLATL   66 (452)
Q Consensus         1 ~~~~~~~g-~~---~~vvv~~p~~~~~il~~~~~~f~~~~~-------~--~~~~-~~~g~~l~~~~~~~w~~~Rr~~~~   66 (452)
                      |||+++++ +.   ++++|+||+++++|+.++. .|++++.       .  .... ...+.++++.+|+.|+++||++.+
T Consensus        27 pv~~~~~~~g~~~~~~vvv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~R~~~~~  105 (398)
T 1lfk_A           27 ALTRVTIGSGADAETHWMATAHAVVRQVMGDHQ-QFSTRRRWDPRDEIGGKGIFRPRELVGNLMDYDPPEHTRLRRKLTP  105 (398)
T ss_dssp             SEEEEC------CCCEEEECSHHHHHHHHHCTT-TEEECTTCCC-------------CCTTCGGGCCTTHHHHHHHHHGG
T ss_pred             CccccccCCCCcccceEEEecHHHHHHHHhhCc-ccccccccccccccCCcccccccccccCccccCCHHHHHHHHHHHh
Confidence            67888875 45   8999999999999993333 4643321       0  1111 123567888899999999999999


Q ss_pred             ccchhhhhhhcchhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhHHH-HHHHHHHHhhcC
Q 012950           67 AFYAESLRVTKSNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEFKL-LTSEIISRTAFG  145 (452)
Q Consensus        67 ~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~~~-~~~~~i~~~~fG  145 (452)
                      +|++++++                          .+.+.+.+.+..+++.|.. .++++|+...+.. ++.++++. +||
T Consensus       106 ~fs~~~l~--------------------------~~~~~i~~~~~~l~~~l~~-~~~~~d~~~~~~~~~~~~vi~~-~~G  157 (398)
T 1lfk_A          106 GFTLRKMQ--------------------------RMAPYIEQIVNDRLDEMER-AGSPADLIAFVADKVPGAVLCE-LVG  157 (398)
T ss_dssp             GGCHHHHH--------------------------HHHHHHHHHHHHHHHHHHH-HCSSEEHHHHTTTTHHHHHHHH-HHT
T ss_pred             hhCHHHHH--------------------------HHHHHHHHHHHHHHHHHHh-cCCCccHHHHHHHHHHHHHHHH-HcC
Confidence            99999999                          9999999999999999975 2568999999887 88999987 599


Q ss_pred             CCccchhhHHHHHHhhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHH
Q 012950          146 SSYLEGESIFNKLTNMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFG  225 (452)
Q Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~  225 (452)
                      .++++.+.+.......            +.    .  ....++..++.+.+.+++.+.++++++.        ..+|+++
T Consensus       158 ~~~~~~~~~~~~~~~~------------~~----~--~~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~dll~  211 (398)
T 1lfk_A          158 VPRDDRDMFMKLCHGH------------LD----A--SLSQKRRAALGDKFSRYLLAMIARERKE--------PGEGMIG  211 (398)
T ss_dssp             CCGGGHHHHHHHHHHT------------TC----T--TSCHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHH
T ss_pred             CCHHHHHHHHHHHHHH------------Hh----c--ccchHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHH
Confidence            9876432222211110            00    0  0112455667778888888888887752        3479999


Q ss_pred             HHHHhcCCCCCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHHH
Q 012950          226 LLLKAYHDPDMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKTM  305 (452)
Q Consensus       226 ~ll~~~~~~~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l  305 (452)
                      .|++..     +..++++++++++..+++||+|||+++++|++++|++||++|+++++|++                 ||
T Consensus       212 ~ll~~~-----~~~l~~~el~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~-----------------~l  269 (398)
T 1lfk_A          212 AVVAEY-----GDDATDEELRGFCVQVMLAGDDNISGMIGLGVLAMLRHPEQIDAFRGDEQ-----------------SA  269 (398)
T ss_dssp             HHHHHH-----GGGSCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHSGGGGGGGSSCHH-----------------HH
T ss_pred             HHHHhc-----CCCCCHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH-----------------HH
Confidence            999874     13689999999999999999999999999999999999999999999964                 78


Q ss_pred             HHHHHHhhcCCCCCC-CccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcc
Q 012950          306 SMVINESLRLYPPAV-NISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAF  384 (452)
Q Consensus       306 ~a~i~E~lRl~p~~~-~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~  384 (452)
                      +|||+|+||++|+++ ..+|.+.+|++++||.||||+.|+++.+++||||++| +||++|+||||.           ..+
T Consensus       270 ~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~~~  337 (398)
T 1lfk_A          270 QRAVDELIRYLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLPAANRDPALA-PDVDRLDVTREP-----------IPH  337 (398)
T ss_dssp             HHHHHHHHHHHCCBSCCSCEEESSCEEETTEEECTTCEEEECHHHHTTCTTTC-TTTTSCCTTSCC-----------CCC
T ss_pred             HHHHHHHHHhCcccccccceecCCCeeECCEEECCCCEEEeChHHhCCCchhc-CCccccCCCCCC-----------CCC
Confidence            999999999999999 5699999999999999999999999999999999999 999999999983           248


Q ss_pred             cccCCCCCCCcchHHHHHHHHHHHHHHHhhc-EEEeCC
Q 012950          385 LPFSSGPRICVGLNFAATEAKIALSMILQRY-RFNLSP  421 (452)
Q Consensus       385 ~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~  421 (452)
                      +|||.|+|.|+|++||.+|++++++.|+++| ++++.+
T Consensus       338 l~FG~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~  375 (398)
T 1lfk_A          338 VAFGHGVHHCLGAALARLELRTVFTELWRRFPALRLAD  375 (398)
T ss_dssp             CTTCCSTTSCTTHHHHHHHHHHHHHHHHHHCTTCEESS
T ss_pred             CCCCCCCCcCCCHHHHHHHHHHHHHHHHHhCCCCEeCC
Confidence            9999999999999999999999999999999 899864


No 59 
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=100.00  E-value=1.4e-57  Score=444.36  Aligned_cols=355  Identities=19%  Similarity=0.240  Sum_probs=286.2

Q ss_pred             Cceeee-ccC-cceEEeCCHHHHHHHHhcCCCCCCCCCchhhHH---hh--h-cCceeccCCccHHHHHhhhccccchhh
Q 012950            1 MNFLTW-YGS-RAQLVITQPELIKEILSNSDGTYPKVQAPGFLR---KI--L-GDGLVTAGGENWHRQRKLATLAFYAES   72 (452)
Q Consensus         1 ~~~~~~-~g~-~~~vvv~~p~~~~~il~~~~~~f~~~~~~~~~~---~~--~-g~~l~~~~~~~w~~~Rr~~~~~f~~~~   72 (452)
                      ||+.+. .|. .++++|++++.+++|+.++ +.|++........   ..  . +.++++.+|+.|+++||+++++|+++.
T Consensus        51 pV~~~~~~g~~~~~~vv~~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~~~~~fs~~~  129 (415)
T 3mgx_A           51 AMVWSDPGSSPSGFWSVFSHRACAAVLAPS-APLTSEYGMMIGFDRDHPDNSGGRMMVVSEHEQHRKLRKLVGPLLSRAA  129 (415)
T ss_dssp             CCEEECSSSSSSCEEEECSHHHHHHHSCTT-SSEECTTCSSTTCCSSSCCTTTTTSGGGCCHHHHHHHHHHHGGGSSHHH
T ss_pred             CEeeccCCCCcCCEEEEecHHHHHHHHhCh-hhhcCCccccccccccccccccCCCccccCcHHHHHHHHHhHhhhCHHH
Confidence            577775 443 8899999999999999654 3675543211111   11  2 556888999999999999999999999


Q ss_pred             hhhhcchhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhH-HHHHHHHHHHhhcCCCccch
Q 012950           73 LRVTKSNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEF-KLLTSEIISRTAFGSSYLEG  151 (452)
Q Consensus        73 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~~~~  151 (452)
                      ++                          .+.+.+.+.+..+++.|..  .+++|+...+ ..+++++|+. +||.+.++.
T Consensus       130 l~--------------------------~~~~~i~~~~~~ll~~l~~--~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~~  180 (415)
T 3mgx_A          130 AR--------------------------KLAERVRIEVGDVLGRVLD--GEVCDAATAIGPRIPAAVVCE-ILGVPAEDE  180 (415)
T ss_dssp             HH--------------------------HSHHHHHHHHHHHTTTSSS--SSCEESTTTTTTHHHHHHHHH-HHTCCGGGH
T ss_pred             HH--------------------------HHHHHHHHHHHHHHHHHHh--cCCcchHHHHHHHHHHHHHHH-HcCCCHHHH
Confidence            99                          9999999999999999876  4589999888 6799999998 589765543


Q ss_pred             hhHHHHHHhhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHhc
Q 012950          152 ESIFNKLTNMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKAY  231 (452)
Q Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~  231 (452)
                      +.+..    +...+..    ...|   .+.+    ....++.+.+.+++.+.++++++.        ..+|+++.|++..
T Consensus       181 ~~~~~----~~~~~~~----~~~~---~~~~----~~~~~~~~~l~~~~~~~i~~rr~~--------~~~dll~~ll~~~  237 (415)
T 3mgx_A          181 DMLID----LTNHAFG----GEDE---LFDG----MTPRQAHTEILVYFDELITARRKE--------PGDDLVSTLVTDD  237 (415)
T ss_dssp             HHHHH----HHHHHTS----CCC-------C----CCHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHHCT
T ss_pred             HHHHH----HHHHHHc----ccCc---ccch----HHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHhCC
Confidence            22222    2111111    1111   1111    122366778888899998887753        4579999999863


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHHHHHHHHH
Q 012950          232 HDPDMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKTMSMVINE  311 (452)
Q Consensus       232 ~~~~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E  311 (452)
                             .++++++++++..+++||+|||+++++|++++|++||++|+++++|+                 ||++|||+|
T Consensus       238 -------~ls~~el~~~~~~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~-----------------~~l~a~i~E  293 (415)
T 3mgx_A          238 -------DLTIDDVLLNCDNVLIGGNETTRHAITGAVHALATVPGLLTALRDGS-----------------ADVDTVVEE  293 (415)
T ss_dssp             -------TSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSTTHHHHHHHTS-----------------SCHHHHHHH
T ss_pred             -------CCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHHHHHHhCh-----------------HhHHHHHHH
Confidence                   58999999999999999999999999999999999999999999994                 899999999


Q ss_pred             hhcCCCCCCCccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcccccCCCC
Q 012950          312 SLRLYPPAVNISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPFSSGP  391 (452)
Q Consensus       312 ~lRl~p~~~~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~  391 (452)
                      +||++|+++..+|.+.+|++++||.||||+.|+++.+++||||++| +||++|||+||-           ..++|||.|+
T Consensus       294 ~LRl~pp~~~~~R~~~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~~-~dP~~F~P~R~~-----------~~~l~FG~G~  361 (415)
T 3mgx_A          294 VLRWTSPAMHVLRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEF-DDPDTFLPGRKP-----------NRHITFGHGM  361 (415)
T ss_dssp             HHHHHCCBCEEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTS-SSTTSCCTTCCS-----------CCCCTTCCGG
T ss_pred             HHHhcCcccccceecCCCeeECCEEECCCCEEEechHHhCCChhhc-CCccccCCCCCC-----------CCCCCCCCCC
Confidence            9999999998899999999999999999999999999999999999 999999999973           2589999999


Q ss_pred             CCCcchHHHHHHHHHHHHHHHhhc-EEEeCCCCcCCCceeeEeecCCCceEEEEEc
Q 012950          392 RICVGLNFAATEAKIALSMILQRY-RFNLSPSYVHSPVLVVTLRPQHGLQVIFQPL  446 (452)
Q Consensus       392 r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r  446 (452)
                      |.|+|++||.+|++++++.|+++| ++++..+.....  ....+....++|.+++|
T Consensus       362 r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~--~~~~~~~~~lpv~~~~R  415 (415)
T 3mgx_A          362 HHCLGSALARIELSVVLRVLAERVSRVDLEREPAWLR--AIVVQGYRELPVRFTGR  415 (415)
T ss_dssp             GCCTTHHHHHHHHHHHHHHHHHHEEEEEECSCCEECS--CSSBCCEEECEEEEEEC
T ss_pred             ccCcCHHHHHHHHHHHHHHHHHhCCCCccCCCccccc--CCcccCceeeeEEEecC
Confidence            999999999999999999999999 899874422211  23345556899999987


No 60 
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=100.00  E-value=2.4e-57  Score=444.60  Aligned_cols=364  Identities=21%  Similarity=0.269  Sum_probs=288.6

Q ss_pred             CceeeeccCcceEEeCCHHHHHHHHhcCCCCCCCCCchhhHH----------hhhcCceeccCCccHHHHHhhhccccch
Q 012950            1 MNFLTWYGSRAQLVITQPELIKEILSNSDGTYPKVQAPGFLR----------KILGDGLVTAGGENWHRQRKLATLAFYA   70 (452)
Q Consensus         1 ~~~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~~~~~~~~~----------~~~g~~l~~~~~~~w~~~Rr~~~~~f~~   70 (452)
                      |||++++|   .++|++|+.+++|+.++. .++..+......          ...+.++++.+|+.|+++||+++++|++
T Consensus        43 pv~~~~~g---~~vv~~~~~v~~vl~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~~~~~fs~  118 (418)
T 3r9b_A           43 PLALPEAN---LAVFSSFSDCDDVLRHPS-SCSDRTKSTIFQRQLAAETQPRPQGPASFLFLDPPDHTRLRGLVSKAFAP  118 (418)
T ss_dssp             CEEEGGGT---EEEECSHHHHHHHHHCTT-EECCGGGCHHHHHHHC---------CCCGGGCCTTHHHHHHHHHHGGGSH
T ss_pred             CEEECCCC---eEEEecHHHHHHHHcCcc-cccCcccccccccccccccccccccccchhhcCCchHHHHHHHhhhhhCH
Confidence            57888776   999999999999997643 333333212121          1234688899999999999999999999


Q ss_pred             hhhhhhcchhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhH-HHHHHHHHHHhhcCCCcc
Q 012950           71 ESLRVTKSNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEF-KLLTSEIISRTAFGSSYL  149 (452)
Q Consensus        71 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~~  149 (452)
                      ++++                          .+.+.+.+.+..+++ +..  .+++|+...+ ..+++++++. +||.+.+
T Consensus       119 ~~l~--------------------------~~~~~i~~~~~~ll~-l~~--~~~~d~~~~~~~~~~~~vi~~-~~G~~~~  168 (418)
T 3r9b_A          119 RVIK--------------------------RLEPEITALVDQLLD-AVD--GPEFNLIDNLAYPLPVAVICR-LLGVPIE  168 (418)
T ss_dssp             HHHG--------------------------GGHHHHHHHHHHHHH-TCC--SSEEEHHHHTTTHHHHHHHHH-HHTCCGG
T ss_pred             HHHH--------------------------HHHHHHHHHHHHHHh-hhc--cCCeehHHHHhCcCCHHHHHH-HcCCCHH
Confidence            9999                          999999999999999 864  5689986554 6899999999 8999886


Q ss_pred             chhhHHHHHHhhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHH
Q 012950          150 EGESIFNKLTNMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLK  229 (452)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~  229 (452)
                      +.+.+......+    ....  ...+.+ .+++.....+..++.+.+.+++.+.++++++.        ..+|+++.|++
T Consensus       169 ~~~~~~~~~~~~----~~~~--~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~--------~~~d~l~~ll~  233 (418)
T 3r9b_A          169 DEPKFSRASALL----AAAL--DPFLAL-TGETSDLFDEQMKAGMWLRDYLRALIDERRRT--------PGEDLMSGLVA  233 (418)
T ss_dssp             GHHHHHHHHHHH----HHTT--SCHHHH-HSSCCTTHHHHHHHHHHHHHHHHHHHHHTTTS--------CCSSHHHHHHH
T ss_pred             HHHHHHHHHHHH----Hhhc--Cccccc-cccCHHHHHHHHHHHHHHHHHHHHHHHHHHhC--------CCccHHHHHHH
Confidence            543332222211    1110  011111 22233445566777788888888888776542        46799999998


Q ss_pred             hcCCCCCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHHHHHHH
Q 012950          230 AYHDPDMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKTMSMVI  309 (452)
Q Consensus       230 ~~~~~~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i  309 (452)
                      ...+   +..++++++++++..+++||+|||+++++|++++|++||++|+++++|+                 .|++|||
T Consensus       234 ~~~~---~~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~-----------------~~l~a~i  293 (418)
T 3r9b_A          234 VEES---GDQLTEDEIIATCNLLLIAGHETTVNLIANAALAMLRTPGQWAALAADG-----------------SRASAVI  293 (418)
T ss_dssp             HHHH---SSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSTTHHHHHHHCG-----------------GGHHHHH
T ss_pred             hhhc---cCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCHHHHHHHHhCh-----------------HhHHHHH
Confidence            6322   3469999999999999999999999999999999999999999999995                 3789999


Q ss_pred             HHhhcCCCCCCCccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcccccCC
Q 012950          310 NESLRLYPPAVNISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPFSS  389 (452)
Q Consensus       310 ~E~lRl~p~~~~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~  389 (452)
                      +|+||++|+++..+|++.+|++++||.||||+.|+++.+++||||++| +||++|+|||.           ...++|||.
T Consensus       294 ~E~lRl~p~~~~~~R~~~~d~~l~g~~Ip~G~~V~~~~~~~~rdp~~~-~dp~~F~p~R~-----------~~~~~~FG~  361 (418)
T 3r9b_A          294 EETMRYDPPVQLVSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIV-GAPDRFDPDRA-----------QIRHLGFGK  361 (418)
T ss_dssp             HHHHHHSCSBCCEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCS-----------CCCCCTTCC
T ss_pred             HHHHHhCCccccceeEeCCCeEECCEEECCCCEEEEChHHhcCCcccC-CCcCcCCCCCC-----------CCCCcCCCC
Confidence            999999999998899999999999999999999999999999999999 99999999992           235899999


Q ss_pred             CCCCCcchHHHHHHHHHHHHHHHhhc-EEEeCCCCcCCCceeeEeecCCCceEEEEEcc
Q 012950          390 GPRICVGLNFAATEAKIALSMILQRY-RFNLSPSYVHSPVLVVTLRPQHGLQVIFQPLS  447 (452)
Q Consensus       390 G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r~  447 (452)
                      |+|.|+|++||.+|++++++.|+++| ++++.++...  ....++++...++|++++|.
T Consensus       362 G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~--~~~~~~~~~~~lpv~~~~r~  418 (418)
T 3r9b_A          362 GAHFCLGAPLARLEATVALPALAARFPEARLSGEPEY--KRNLTLRGMSTLSIAVHHHH  418 (418)
T ss_dssp             GGGCCTTHHHHHHHHHHHHHHHHHHCTTCEECSCCEE--CSCSSBCCEEECEEEC----
T ss_pred             cCccCccHHHHHHHHHHHHHHHHHhCccceeCCCCcc--ccCCcccCcceeEEEecCCC
Confidence            99999999999999999999999999 8999865222  22355677788999998874


No 61 
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=100.00  E-value=5e-57  Score=441.80  Aligned_cols=334  Identities=20%  Similarity=0.281  Sum_probs=280.8

Q ss_pred             Cceeeecc-CcceEEeCCHHHHHHHHhcCCCCCCCCC----chhhHHh-----hhcCceeccCCccHHHHHhhhccccch
Q 012950            1 MNFLTWYG-SRAQLVITQPELIKEILSNSDGTYPKVQ----APGFLRK-----ILGDGLVTAGGENWHRQRKLATLAFYA   70 (452)
Q Consensus         1 ~~~~~~~g-~~~~vvv~~p~~~~~il~~~~~~f~~~~----~~~~~~~-----~~g~~l~~~~~~~w~~~Rr~~~~~f~~   70 (452)
                      |||+++++ +.++++|+||+++++|+.++  .|++..    .......     ..+.++++.+|+.|+++||++.++|++
T Consensus        43 pv~~~~~~~g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~~~~~fs~  120 (417)
T 3tyw_A           43 PVARVTLPTRREAWVVTRYDDVRELLSDP--RVSADIRRPGFPALGEGEQEAGARFRPFIRTDAPEHTRYRRMLLPAFTV  120 (417)
T ss_dssp             TEEEEECTTSCEEEEECCHHHHHHHHHCT--TEECCSSSTTCCCSSTTTSTTSSSCCCGGGCCHHHHHHHHHHHGGGGCH
T ss_pred             CeeeeecCCCCCeEEEcCHHHHHHHHcCC--CcccCCccccccccccccccccccccchhhcCCcHHHHHHHHHHhhhCH
Confidence            68999987 58999999999999999875  564421    1111111     235788899999999999999999999


Q ss_pred             hhhhhhcchhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhH-HHHHHHHHHHhhcCCCcc
Q 012950           71 ESLRVTKSNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEF-KLLTSEIISRTAFGSSYL  149 (452)
Q Consensus        71 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~~  149 (452)
                      ++++                          .+.+.+.+++..+++.+.. .++++|+...+ ..++.++++.+ ||.+++
T Consensus       121 ~~l~--------------------------~~~~~i~~~~~~l~~~l~~-~g~~~d~~~~~~~~~~~~vi~~~-~G~~~~  172 (417)
T 3tyw_A          121 RRVR--------------------------AMRPAVQARVDEILDGMLA-AGGPVDLVSAYANAVSTSVICEL-LGIPRH  172 (417)
T ss_dssp             HHHH--------------------------HTHHHHHHHHHHHHHHHHH-HCSSEEHHHHTHHHHHHHHHHHH-HTCCTT
T ss_pred             HHHH--------------------------HHHHHHHHHHHHHHHHHHh-hCCCcchHHHHHHHHHHHHHHHH-hCCCHH
Confidence            9999                          9999999999999999986 35679999988 57899999997 999887


Q ss_pred             chhhHHHHHHhhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHH
Q 012950          150 EGESIFNKLTNMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLK  229 (452)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~  229 (452)
                      +.+.+.....    .+..            ..  .......++.+.+.+++.+.++++++.        ..+|+++.|++
T Consensus       173 ~~~~~~~~~~----~~~~------------~~--~~~~~~~~~~~~l~~~~~~~i~~r~~~--------~~~d~l~~ll~  226 (417)
T 3tyw_A          173 DLEFFRDVTR----ISGS------------RN--STAEQVSEALGGLFGLLGGLVAERREE--------PRDDLISKLVT  226 (417)
T ss_dssp             TTTHHHHHHH----HHHS------------SS--SCTTHHHHHHHHHHHHHHHHHHHHHSS--------CCSSHHHHHHH
T ss_pred             HHHHHHHHHH----HHhc------------cc--CCHHHHHHHHHHHHHHHHHHHHHHhhC--------CCCCHHHHHHH
Confidence            5433322111    1100            00  122356677788888888888877642        45899999998


Q ss_pred             hcCCCCCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHHHHHHH
Q 012950          230 AYHDPDMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKTMSMVI  309 (452)
Q Consensus       230 ~~~~~~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i  309 (452)
                      ...++   ..++++++++++..+++||+|||+++++|++++|++||++|++|++|+                 .||+|||
T Consensus       227 ~~~~~---~~ls~~el~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~-----------------~~l~a~i  286 (417)
T 3tyw_A          227 DHLVP---GNVTTEQLLSTLGITINAGRETTTSMIALSTLLLLDRPELPAELRKDP-----------------DLMPAAV  286 (417)
T ss_dssp             HTTTT---TSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTHHHHHHHHCG-----------------GGHHHHH
T ss_pred             hcccC---CCCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCHHHHHHHHhCh-----------------HHHHHHH
Confidence            76543   369999999999999999999999999999999999999999999994                 4799999


Q ss_pred             HHhhcCCCCCCC-ccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcccccC
Q 012950          310 NESLRLYPPAVN-ISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPFS  388 (452)
Q Consensus       310 ~E~lRl~p~~~~-~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg  388 (452)
                      +|+||++|+++. ++|++.+|++++||.||||+.|+++.+++||||++| +||++|+|+||.           ..++|||
T Consensus       287 ~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~~~l~FG  354 (417)
T 3tyw_A          287 DELLRVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQF-DDPERVDFHRTD-----------NHHVAFG  354 (417)
T ss_dssp             HHHHHHHCSCTTCCEEEESSCEECSSCEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCSC-----------CCCCTTC
T ss_pred             HHHHHhccccccCceeEeCCCeEECCEEECCCCEEEEehhhhcCChhhc-CCccccCCCCCC-----------CCCCCCC
Confidence            999999999997 599999999999999999999999999999999999 999999999993           2589999


Q ss_pred             CCCCCCcchHHHHHHHHHHHHHHHhhc-EEEeCCC
Q 012950          389 SGPRICVGLNFAATEAKIALSMILQRY-RFNLSPS  422 (452)
Q Consensus       389 ~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~  422 (452)
                      .|+|.|+|++||.+|++++++.|+++| +|+++.+
T Consensus       355 ~G~r~C~G~~lA~~e~~~~l~~ll~~fp~~~l~~~  389 (417)
T 3tyw_A          355 YGVHQCVGQHLARLELEVALETLLRRVPTLRLAGE  389 (417)
T ss_dssp             CSTTCCSCHHHHHHHHHHHHHHHHHHCTTCEECSC
T ss_pred             CCCccCcCHHHHHHHHHHHHHHHHHhCCcccccCC
Confidence            999999999999999999999999999 9999743


No 62 
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=100.00  E-value=1.4e-57  Score=447.65  Aligned_cols=358  Identities=15%  Similarity=0.155  Sum_probs=283.3

Q ss_pred             Cceeee--------ccCcceEEeCCHHHHHHHHhcCCCCCCCCCchhh----------HHhhhcCceeccCCccHHHHHh
Q 012950            1 MNFLTW--------YGSRAQLVITQPELIKEILSNSDGTYPKVQAPGF----------LRKILGDGLVTAGGENWHRQRK   62 (452)
Q Consensus         1 ~~~~~~--------~g~~~~vvv~~p~~~~~il~~~~~~f~~~~~~~~----------~~~~~g~~l~~~~~~~w~~~Rr   62 (452)
                      |||+++        +|+.++++|++|+++++|+.++ ..|++......          .....+.++++.+|+.|+++||
T Consensus        51 Pv~~~~~~~g~~~~lG~~~~~vv~~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~  129 (433)
T 3ivy_A           51 PIWWNGQDPGKGGGFHDGGFWAITKLNDVKEISRHS-DVFSSYENGVIPRFKNDIAREDIEVQRFVMLNMDAPHHTRLRK  129 (433)
T ss_dssp             SEEEEECCTTCSTTCCSSEEEEECSHHHHHHHHHCT-TTEESTTTCSCCCCCTTCCHHHHHGGGGSGGGCCTTHHHHHHH
T ss_pred             CEEecccccccccccCCCCEEEEecHHHHHHHHcCh-hhccCCcccccccccccccccccccccCCccccChHHHHHHHH
Confidence            577887        5668999999999999999765 46754432111          1123457888999999999999


Q ss_pred             hhccccchhhhhhhcchhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhH-HHHHHHHHHH
Q 012950           63 LATLAFYAESLRVTKSNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEF-KLLTSEIISR  141 (452)
Q Consensus        63 ~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~-~~~~~~~i~~  141 (452)
                      ++.++|+++.++                          .+.+.+.+.+..+++.+..  ++++|+...+ ..+++++|+.
T Consensus       130 ~~~~~fs~~~l~--------------------------~~~~~i~~~~~~ll~~l~~--~~~~d~~~~~~~~~~~~vi~~  181 (433)
T 3ivy_A          130 IISRGFTPRAVG--------------------------RLHDELQERAQKIAAEAAA--AGSGDFVEQVSCELPLQAIAG  181 (433)
T ss_dssp             HHGGGSCHHHHH--------------------------TTHHHHHHHHHHHHHHHHH--HCEEEHHHHTTSHHHHHHHHH
T ss_pred             HHHHhhCHHHHH--------------------------HHHHHHHHHHHHHHHHHhh--CCCeeHHHHHHHHHHHHHHHH
Confidence            999999999999                          9999999999999999975  4689998888 9999999999


Q ss_pred             hhcCCCccchhhHHHHHHhhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC
Q 012950          142 TAFGSSYLEGESIFNKLTNMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGN  221 (452)
Q Consensus       142 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  221 (452)
                      + ||.+..+.+.+.....       .. .....|.+       ...+..++.+.+.+++.+.++++++.        ..+
T Consensus       182 l-~G~~~~~~~~~~~~~~-------~~-~~~~~p~~-------~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~  237 (433)
T 3ivy_A          182 L-LGVPQEDRGKLFHWSN-------EM-TGNEDPEY-------AHIDPKASSAELIGYAMKMAEEKAKN--------PAD  237 (433)
T ss_dssp             H-HTCCHHHHHHHHHHHT-------TC-SCCCCGGG-------TTCCHHHHHHHHHHHHHHHHHHC--------------
T ss_pred             H-cCCCHHHHHHHHHHHH-------HH-hccCCchh-------hhHHHHHHHHHHHHHHHHHHHHHhcC--------CCC
Confidence            6 8975432222111111       10 11112211       11145567778888888888887653        457


Q ss_pred             cHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccc
Q 012950          222 DYFGLLLKAYHDPDMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGK  301 (452)
Q Consensus       222 d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~  301 (452)
                      |+++.|++...+   +..++++++++++..+++||+|||+++++|++++|++||++|+++++|++               
T Consensus       238 dll~~ll~~~~~---~~~ls~~ei~~~~~~ll~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~~---------------  299 (433)
T 3ivy_A          238 DIVTQLIQADID---GEKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYKKVRP---------------  299 (433)
T ss_dssp             -CHHHHHSCC-----CCCCCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHHCC---------------
T ss_pred             cHHHHHHhhhcC---CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHHHHHHhCcc---------------
Confidence            999999986443   34699999999999999999999999999999999999999999999963               


Q ss_pred             cHHHHHHHHHhhcCCCCCCCccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCC
Q 012950          302 LKTMSMVINESLRLYPPAVNISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTP  381 (452)
Q Consensus       302 lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~  381 (452)
                          +|||+|+||++|+++..+|++.+|++++||.||||+.|+++.+++||||++| +||++|+|+||.           
T Consensus       300 ----~a~i~E~LRl~p~~~~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~f-~dp~~F~p~R~~-----------  363 (433)
T 3ivy_A          300 ----ETAADEIVRWATPVTAFQRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVF-QDPFTFNILRNP-----------  363 (433)
T ss_dssp             ----TTHHHHHHHHHCSBCEEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTS-SSTTSCCTTCCS-----------
T ss_pred             ----cchhHHHhhhCcchhceeeEECCCEEECCEEECCCCEEEEChhhhcCCchhC-CCcCccCCCCCC-----------
Confidence                7999999999999998899999999999999999999999999999999999 999999999993           


Q ss_pred             CcccccC-CCCCCCcchHHHHHHHHHHHHHHHhhcE-EEeCCCCcCCCceeeEeecCCCceEEEEEcc
Q 012950          382 AAFLPFS-SGPRICVGLNFAATEAKIALSMILQRYR-FNLSPSYVHSPVLVVTLRPQHGLQVIFQPLS  447 (452)
Q Consensus       382 ~~~~~Fg-~G~r~C~G~~~a~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r~  447 (452)
                      ..++||| .|+|.|+|++||.+|++++++.|+++|+ ++++++.....  ....+....++|.|++|.
T Consensus       364 ~~~l~FGg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~--~~~~~g~~~lpv~~~~R~  429 (433)
T 3ivy_A          364 NPHVGFGGTGAHYCIGANLARMTINLIFNAVADHMPDLKPISAPERLR--SGWLNGIKHWQVDYTGRC  429 (433)
T ss_dssp             CCCCTTCSSSTTCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCCEECC--CSSBCCEEECEEESCC--
T ss_pred             CCCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCccEECCCCceec--cCcccCcceeEEEEeccc
Confidence            1589999 9999999999999999999999999998 99975422211  122333447899998875


No 63 
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=100.00  E-value=4.9e-56  Score=433.37  Aligned_cols=339  Identities=15%  Similarity=0.214  Sum_probs=277.3

Q ss_pred             Cceeeecc-CcceEEeCCHHHHHHHHhcCC-CCCC-CCCchh--hH--Hhhhc-CceeccCCccHHHHHhhhccccchhh
Q 012950            1 MNFLTWYG-SRAQLVITQPELIKEILSNSD-GTYP-KVQAPG--FL--RKILG-DGLVTAGGENWHRQRKLATLAFYAES   72 (452)
Q Consensus         1 ~~~~~~~g-~~~~vvv~~p~~~~~il~~~~-~~f~-~~~~~~--~~--~~~~g-~~l~~~~~~~w~~~Rr~~~~~f~~~~   72 (452)
                      |||+++++ +.+.++|++++.+++++.++. ..+. ++....  ..  ....+ .++++.+|+.|+++||++.++|++++
T Consensus        31 pv~~~~~~~g~~~~vv~~~~~v~~vl~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~l~~~~g~~h~~~R~~~~~~fs~~~  110 (404)
T 1jfb_A           31 PVSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFPELSASGKQAAKAKPTFVDMDPPEHMHQRSMVEPTFTPEA  110 (404)
T ss_dssp             SEEEEECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCCCCSHHHHHHTTSCCCGGGCCTTHHHHHHTTTGGGGSHHH
T ss_pred             CeeeeecCCCCceEEEecHHHHHHHHcCCcccccccccCCccccccccchhcccCcccccCchhHHHHHHHhhhhcCHHH
Confidence            57888774 567788999999999998753 1232 222211  01  11223 56888899999999999999999999


Q ss_pred             hhhhcchhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcC--CceeehhhhHHHHHHHHHHHhhcCCCccc
Q 012950           73 LRVTKSNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSE--GKEIEVSQEFKLLTSEIISRTAFGSSYLE  150 (452)
Q Consensus        73 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~--~~~~d~~~~~~~~~~~~i~~~~fG~~~~~  150 (452)
                      ++                          .+.+.+.++++.+++.|...+  ++++|+...+...+.++++..+||.++++
T Consensus       111 l~--------------------------~~~~~i~~~~~~l~~~l~~~~~~~~~~d~~~~~~~~~~~~i~~~~~G~~~~~  164 (404)
T 1jfb_A          111 VK--------------------------NLQPYIQRTVDDLLEQMKQKGCANGPVDLVKEFALPVPSYIIYTLLGVPFND  164 (404)
T ss_dssp             HH--------------------------HHHHHHHHHHHHHHHHHHHHCSTTSCEEHHHHTTTHHHHHHHHHHHTCCGGG
T ss_pred             HH--------------------------HHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHcCCCHHH
Confidence            99                          999999999999999997642  46799999999999999999999988753


Q ss_pred             hhhHHHHHHhhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHh
Q 012950          151 GESIFNKLTNMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKA  230 (452)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~  230 (452)
                      . +....   +...+        ..    +.+  ..+...++.+.+.+++.+.++++++.        ..+|+++.|++.
T Consensus       165 ~-~~~~~---~~~~~--------~~----~~~--~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~d~l~~ll~~  218 (404)
T 1jfb_A          165 L-EYLTQ---QNAIR--------TN----GSS--TAREASAANQELLDYLAILVEQRLVE--------PKDDIISKLCTE  218 (404)
T ss_dssp             H-HHHHH---HHHHH--------HC----TTS--CHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHHH
T ss_pred             H-HHHHH---HHHHH--------hc----cCc--chHHHHHHHHHHHHHHHHHHHHHHhC--------CCCcHHHHHHHh
Confidence            2 21111   11110        01    111  23345566778888888888877652        357999999976


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHHHHHHHH
Q 012950          231 YHDPDMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKTMSMVIN  310 (452)
Q Consensus       231 ~~~~~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~  310 (452)
                      ..+   +..++++++++++..+++||+|||+++++|++++|++||++|++|+++                 .+||+|||+
T Consensus       219 ~~~---~~~l~~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~~-----------------~~yl~a~i~  278 (404)
T 1jfb_A          219 QVK---PGNIDKSDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKAN-----------------PSLAPQFVE  278 (404)
T ss_dssp             TTT---TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHC-----------------GGGHHHHHH
T ss_pred             hcc---CCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHhC-----------------hHhHHHHHH
Confidence            432   246899999999999999999999999999999999999999999983                 489999999


Q ss_pred             HhhcCCCCCC-CccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcccccCC
Q 012950          311 ESLRLYPPAV-NISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPFSS  389 (452)
Q Consensus       311 E~lRl~p~~~-~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~  389 (452)
                      |+||++|+++ ..+|++.+|++++||.||||+.|+++.+++||||++| +||++|+||||+++         ..++|||.
T Consensus       279 E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeRf~~~---------~~~~~Fg~  348 (404)
T 1jfb_A          279 ELCRYHTASALAIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVF-ENPDEFNMNRKWPP---------QDPLGFGF  348 (404)
T ss_dssp             HHHHHSCSCCSCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCCCCS---------SCCCTTCC
T ss_pred             HHHhhCCCccccceeeeCCCeeECCEEECCCCEEEeCHHhhCCCchhC-CChhhcCCCCCCCC---------CCCCCCCC
Confidence            9999999999 5699999999999999999999999999999999999 99999999999743         14999999


Q ss_pred             CCCCCcchHHHHHHHHHHHHHHHhhc-EEEeCC
Q 012950          390 GPRICVGLNFAATEAKIALSMILQRY-RFNLSP  421 (452)
Q Consensus       390 G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~  421 (452)
                      |+|.|+|++||++|++++++.|+++| ++++.+
T Consensus       349 G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~  381 (404)
T 1jfb_A          349 GDHRCIAEHLAKAELTTVFSTLYQKFPDLKVAV  381 (404)
T ss_dssp             GGGSCTTHHHHHHHHHHHHHHHHHHCTTCEESS
T ss_pred             CCccCCCHHHHHHHHHHHHHHHHHHCCCceecC
Confidence            99999999999999999999999999 799864


No 64 
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=100.00  E-value=2.6e-56  Score=437.24  Aligned_cols=361  Identities=16%  Similarity=0.166  Sum_probs=288.1

Q ss_pred             Cceeeec-cCcceEEeCCHHHHHHHHhcCCCCCCCCCc------hh-----hHHhhhcCceeccCCccHHHHHhhhcccc
Q 012950            1 MNFLTWY-GSRAQLVITQPELIKEILSNSDGTYPKVQA------PG-----FLRKILGDGLVTAGGENWHRQRKLATLAF   68 (452)
Q Consensus         1 ~~~~~~~-g~~~~vvv~~p~~~~~il~~~~~~f~~~~~------~~-----~~~~~~g~~l~~~~~~~w~~~Rr~~~~~f   68 (452)
                      ||+.++. ++.++++|++++.+++++.++. .|++...      ..     ......+.++++.+|+.|+++||+++++|
T Consensus        52 pv~~~~~~~~~~~~vvt~~~~v~~vl~d~~-~fs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~~~~~f  130 (426)
T 3rwl_A           52 PVHYCADSAFGPYWSITKYNDIMHVDTNHD-IFSSDAGYGGIIIDDGIQKGGDGGLDLPNFIAMDRPRHDEQRKAVSPIV  130 (426)
T ss_dssp             SEEEESCCTTCSEEEECSHHHHHHHHHCTT-TEECCGGGTCSSSSCCC-------CCCCCGGGCCTTHHHHHHHHHGGGG
T ss_pred             CeeeccCCCCCCEEEEcCHHHHHHHHcCCc-ccccccccCCCCcccccccccccccccCcccccCchHHHHHHHHhhhhh
Confidence            5788877 4678999999999999998764 6654321      01     11222346788899999999999999999


Q ss_pred             chhhhhhhcchhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhH-HHHHHHHHHHhhcCCC
Q 012950           69 YAESLRVTKSNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEF-KLLTSEIISRTAFGSS  147 (452)
Q Consensus        69 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~  147 (452)
                      +++.++                          .+.+.+.+.+.++++.|..  ++++|+...+ ..++.++++. +||.+
T Consensus       131 s~~~l~--------------------------~~~~~i~~~~~~ll~~l~~--~~~~dl~~~~~~~~~~~vi~~-l~G~~  181 (426)
T 3rwl_A          131 APANLA--------------------------ALEGTIRERVSKTLDGLPV--GEEFDWVDRVSIEITTQMLAT-LFDFP  181 (426)
T ss_dssp             CHHHHH--------------------------HHHHHHHHHHHHHHHTSCS--SSCEEHHHHTHHHHHHHHHHH-HHTCC
T ss_pred             CHHHHH--------------------------HHHHHHHHHHHHHHHHhhc--CCCcchHHHHHHHHHHHHHHH-HcCCC
Confidence            999999                          9999999999999999964  6789987777 5788888776 89987


Q ss_pred             ccchhhHHHHHHhhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHH
Q 012950          148 YLEGESIFNKLTNMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLL  227 (452)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~l  227 (452)
                      ..+.+.+    ..+...+.      .++.. .  .........++.+.+.+++.+.++++..   . .   ..+|+++.|
T Consensus       182 ~~~~~~~----~~~~~~~~------~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~i~~r~~---~-~---~~~dll~~l  241 (426)
T 3rwl_A          182 FEERRKL----TRWSDVTT------AAPGG-G--VVESWDQRKTELLECAAYFQVLWNERVN---K-D---PGNDLISML  241 (426)
T ss_dssp             GGGTHHH----HHHHHHHT------CCTTS-S--SCSSHHHHHHHHHHHHHHHHHHHHHHHT---S-C---CCSSHHHHH
T ss_pred             HHHHHHH----HHHHHHHH------hccCc-c--ccccHHHHHHHHHHHHHHHHHHHHHHhh---c-C---CCCCHHHHH
Confidence            6543332    22211111      11111 0  1122344556677888888888877632   1 1   568999999


Q ss_pred             HHhcCCCCCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHHHHH
Q 012950          228 LKAYHDPDMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKTMSM  307 (452)
Q Consensus       228 l~~~~~~~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a  307 (452)
                      ++...+    .++++++++++++.+++||+|||+++++|++++|++||++|++|++|                 ++|+++
T Consensus       242 l~~~~~----~~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~E-----------------~~~l~a  300 (426)
T 3rwl_A          242 AHSPAT----RNMTPEEYLGNVLLLIVGGNDTTRNSMTGGVLALHKNPDQFAKLKAN-----------------PALVET  300 (426)
T ss_dssp             HHCGGG----GGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHC-----------------GGGHHH
T ss_pred             HhcccC----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhC-----------------hHhHHH
Confidence            987433    35899999999999999999999999999999999999999999998                 469999


Q ss_pred             HHHHhhcCCCCCCCccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCccccc
Q 012950          308 VINESLRLYPPAVNISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPF  387 (452)
Q Consensus       308 ~i~E~lRl~p~~~~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~F  387 (452)
                      +|+|+||++|+++..+|++.+|++++||.||||+.|+++.+++||||++| +||++|||+||.+          ..++||
T Consensus       301 ~i~E~LRl~p~~~~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~f-~dP~~F~p~R~~~----------~~~l~F  369 (426)
T 3rwl_A          301 MVPEIIRWQTPLAHMRRTAIADSELGGKTIRKGDKVVMWYYSGNRDDEVI-DRPEEFIIDRPRP----------RQHLSF  369 (426)
T ss_dssp             HHHHHHHHHCSBCCEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCSCT----------TCCSTT
T ss_pred             HHHHHHHhcCccccCceecCCCeEECCEEECCCCEEEechHHhCCCcccc-CCcCccCCCCCCC----------CCccCC
Confidence            99999999999998999999999999999999999999999999999999 9999999999943          369999


Q ss_pred             CCCCCCCcchHHHHHHHHHHHHHHHhhc-EEEeCCCCcCCCceeeEeecCCCceEEEEE
Q 012950          388 SSGPRICVGLNFAATEAKIALSMILQRY-RFNLSPSYVHSPVLVVTLRPQHGLQVIFQP  445 (452)
Q Consensus       388 g~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~  445 (452)
                      |.|+|.|+|++||.+|++++++.|+++| ++++.++....  ....+++...++|+++|
T Consensus       370 G~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~--~~~~~~g~~~lpv~~~P  426 (426)
T 3rwl_A          370 GFGIHRCVGNRLAEMQLRILWEEILTRFSRIEVMAEPERV--RSNFVRGYAKMMVRVHA  426 (426)
T ss_dssp             CCSTTSCSSHHHHHHHHHHHHHHHHTTCSEEEECSCCEEC--CCSSBCCEEECEEEEEC
T ss_pred             CCCCcCCccHHHHHHHHHHHHHHHHHhCccCeeCCCCccc--ccccccCcceeeEEEeC
Confidence            9999999999999999999999999999 99997552222  12334555678888875


No 65 
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=100.00  E-value=1.1e-56  Score=436.60  Aligned_cols=349  Identities=13%  Similarity=0.185  Sum_probs=283.1

Q ss_pred             Cceeeec-cCcceEEeCCHHHHHHHHhcCCCCCCCCCchh-hHHhh-hcCc--eeccCC------ccHHHHHhhhccccc
Q 012950            1 MNFLTWY-GSRAQLVITQPELIKEILSNSDGTYPKVQAPG-FLRKI-LGDG--LVTAGG------ENWHRQRKLATLAFY   69 (452)
Q Consensus         1 ~~~~~~~-g~~~~vvv~~p~~~~~il~~~~~~f~~~~~~~-~~~~~-~g~~--l~~~~~------~~w~~~Rr~~~~~f~   69 (452)
                      |||++++ |+.+.++|+||+++++|+.++  .|.++.... .+... .+.+  +++.+|      +.|+++||++.++|+
T Consensus        40 pv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~h~~~R~~~~~~fs  117 (404)
T 2xbk_A           40 PIHRVRTPAGDEAWLVTRHAELKQLLHDE--RIGRTHPDPPSAAQYVRSPFLDLLISDADAESGRRQHAETRRLLTPLFS  117 (404)
T ss_dssp             SEEEEECTTSCEEEEECSHHHHHHHTTCT--TEESBCSSGGGSCCSSCCHHHHTTCBCSCHHHHHHHHHHHHHHHGGGGC
T ss_pred             CEeeeccCCCceEEEEcCHHHHHHHHcCC--CCCCCccccccCCcccccccccceeeCCCCCCCCchHHHHHHHhhhhcC
Confidence            6899997 899999999999999999874  475544321 12221 3445  778899      999999999999999


Q ss_pred             hhhhhhhcchhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhH-HHHHHHHHHHhhcCCCc
Q 012950           70 AESLRVTKSNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEF-KLLTSEIISRTAFGSSY  148 (452)
Q Consensus        70 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~  148 (452)
                      +++++                          .+.+.+.+.+..+++.|.. .++++|+...+ ..+++++++. +||.++
T Consensus       118 ~~~l~--------------------------~~~~~i~~~~~~ll~~l~~-~g~~~d~~~~~~~~~~~~vi~~-~~G~~~  169 (404)
T 2xbk_A          118 ARRVL--------------------------EMQPKVEEAADTLLDAFIA-QGPPGDLHGELTVPFALTVLCE-VIGVPP  169 (404)
T ss_dssp             HHHHH--------------------------HHHHHHHHHHHHHHHHHHH-TCSSEEHHHHTHHHHHHHHHHH-HHTCCG
T ss_pred             HHHHH--------------------------HHHHHHHHHHHHHHHHHHh-cCCCeeHHHHHHHHHHHHHHHH-HhCCCH
Confidence            99999                          9999999999999999975 34589998766 5699999997 799887


Q ss_pred             cchhhHHHHHHhhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHH
Q 012950          149 LEGESIFNKLTNMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLL  228 (452)
Q Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll  228 (452)
                      ++.+.+....    ..+..      .+     .+   . +..++.+.+.+++.+.++++++.        ..+|+++.| 
T Consensus       170 ~~~~~~~~~~----~~~~~------~~-----~~---p-~~~~~~~~~~~~~~~~i~~r~~~--------~~~dll~~l-  221 (404)
T 2xbk_A          170 QRRAELTTLL----AGIAK------LD-----DR---E-GAVRAQDDLFGYVAGLVEHKRAE--------PGPDIISRL-  221 (404)
T ss_dssp             GGHHHHHHHH----HHHTB------SS-----CH---H-HHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHH-
T ss_pred             HHHHHHHHHH----HHHHh------cc-----Cc---H-HHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHh-
Confidence            6433222211    11100      00     00   1 45566778888888888887653        346899988 


Q ss_pred             HhcCCCCCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHHHHHH
Q 012950          229 KAYHDPDMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKTMSMV  308 (452)
Q Consensus       229 ~~~~~~~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~  308 (452)
                      +    +  + .++++++++++..+++||+|||+++++|++++|++||++|+++++|++                 ||+||
T Consensus       222 ~----~--~-~ls~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~~-----------------~l~a~  277 (404)
T 2xbk_A          222 N----D--G-ELTEDRVAHLAMGLLFAGLDSVASIMDNGVVLLAAHPDQRAAALADPD-----------------VMARA  277 (404)
T ss_dssp             H----S--S-SCCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHCHH-----------------HHHHH
T ss_pred             h----c--C-CCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHhCHH-----------------HHHHH
Confidence            2    1  2 689999999999999999999999999999999999999999999963                 79999


Q ss_pred             HHHhhcCCCCCC--CccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcccc
Q 012950          309 INESLRLYPPAV--NISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLP  386 (452)
Q Consensus       309 i~E~lRl~p~~~--~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~  386 (452)
                      |+|+||++|+++  ..+|++.+|++++||.||||+.|+++.+++||||++| +||++|+||||.           ..++|
T Consensus       278 i~E~lRl~p~~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~-----------~~~lp  345 (404)
T 2xbk_A          278 VEEVLRTARAGGSVLPPRYASEDMEFGGVTIRAGDLVLFDLGLPNFDERAF-TGPEEFDAARTP-----------NPHLT  345 (404)
T ss_dssp             HHHHHHHSCSSCCBCSCEEESSCEEETTEEECTTCEEECBTHHHHTCTTTS-SSTTSCCTTCSS-----------CCCCT
T ss_pred             HHHHHHhCCCccccccceeECCCeeECCEEECCCCEEEeChHHhcCChhhC-CCccccCCCCCC-----------CCCCC
Confidence            999999999999  6799999999999999999999999999999999999 999999999983           25899


Q ss_pred             cCCCCCCCcchHHHHHHHHHHHHHHHhhc-EEEeCCCC-cCCCceeeEeecCCCceEEE
Q 012950          387 FSSGPRICVGLNFAATEAKIALSMILQRY-RFNLSPSY-VHSPVLVVTLRPQHGLQVIF  443 (452)
Q Consensus       387 Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~-~~~~~~~~~~~p~~~~~v~~  443 (452)
                      ||.|+|.|+|++||.+|++++++.|+++| ++++.++. ........++++..+++|.|
T Consensus       346 FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~  404 (404)
T 2xbk_A          346 FGHGIWHCIGAPLARLELRTMFTKLFTRLPELRPELPVEQLRLKEGQLSGGFAELRVVW  404 (404)
T ss_dssp             TEETTEECTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCSSBTTCCBSCCEEEC
T ss_pred             CCCCCcCCCcHHHHHHHHHHHHHHHHHhCCcceecCCCCcceeccCcccCCcceeeeeC
Confidence            99999999999999999999999999999 79987542 22222234456667888764


No 66 
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=100.00  E-value=1.3e-55  Score=427.43  Aligned_cols=349  Identities=17%  Similarity=0.185  Sum_probs=284.4

Q ss_pred             CceeeeccC----cceEEeCCHHHHHHHHhcCCCCCCCCCchhhHH--hhhcCceeccCCccHHHHHhhhccccchhhhh
Q 012950            1 MNFLTWYGS----RAQLVITQPELIKEILSNSDGTYPKVQAPGFLR--KILGDGLVTAGGENWHRQRKLATLAFYAESLR   74 (452)
Q Consensus         1 ~~~~~~~g~----~~~vvv~~p~~~~~il~~~~~~f~~~~~~~~~~--~~~g~~l~~~~~~~w~~~Rr~~~~~f~~~~l~   74 (452)
                      |||++++|+    .++++++||+++++|+.+. ..|++++......  ...+.+++..+|+.|+++||++.++|++++++
T Consensus        26 pv~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~R~~~~~~fs~~~l~  104 (384)
T 3oo3_A           26 PLHEYDTEPGMDGRKQWLVTGHDEVRAILADH-ERFSSMRPVDDEADRALLPGILQAYDPPDHTRLRRTVAPAYSARRME  104 (384)
T ss_dssp             SEECCCCC------CEEEECCHHHHHHHHHCT-TTEECSCCCC-----CCCTTCGGGCCTTHHHHHHHHHGGGGCHHHHH
T ss_pred             CeeecccccccCCCCEEEEcCHHHHHHHHhCc-hhccCCccccccccccccccccccCCChhHHHHHHHHHHhhCHHHHH
Confidence            688888886    8999999999999999654 5786655322111  22345677889999999999999999999999


Q ss_pred             hhcchhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhHHHHHHHHHHHhhcCCCccchhhH
Q 012950           75 VTKSNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEFKLLTSEIISRTAFGSSYLEGESI  154 (452)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~~~~  154 (452)
                                                .+.+.+.+.++.+++.|.+ .++++|+...+...+.+.+...+||.+.++.+++
T Consensus       105 --------------------------~~~~~i~~~~~~l~~~l~~-~~~~~d~~~~~~~~~~~~v~~~~~G~~~~~~~~~  157 (384)
T 3oo3_A          105 --------------------------RLRPRIEEIVEECLDDFES-VGAPVDFVRHAAWPIPAYIACEFLGVPRDDQAEL  157 (384)
T ss_dssp             --------------------------HHHHHHHHHHHHHHHHHHH-SCSSEEHHHHTTTHHHHHHHHHHHTCCGGGHHHH
T ss_pred             --------------------------HHHHHHHHHHHHHHHHHHh-cCCCccHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence                                      9999999999999999976 3578999999999888888888999987654433


Q ss_pred             HHHHHhhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHhcCCC
Q 012950          155 FNKLTNMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKAYHDP  234 (452)
Q Consensus       155 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~  234 (452)
                      ...+.....                   ........+..+.+.+++.+.+++++..        ..+|+++.|++..   
T Consensus       158 ~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~i~~~~~~--------~~~d~l~~ll~~~---  207 (384)
T 3oo3_A          158 SRMIRESRE-------------------SRLPRQRTLSGLGIVNYTKRLTSGKRRD--------PGDGMIGVIVREH---  207 (384)
T ss_dssp             HHHHHHHHH-------------------CSCHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHHHH---
T ss_pred             HHHHHHHhc-------------------cCChHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHHhc---
Confidence            332222111                   1223456677788888898888877642        4579999999871   


Q ss_pred             CCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHHHHHHHHHhhc
Q 012950          235 DMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKTMSMVINESLR  314 (452)
Q Consensus       235 ~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lR  314 (452)
                        +..++++++.+++..+++||+|||+++++|++++|++||++|+++++|++.                 |+|||+|+||
T Consensus       208 --~~~l~~~~l~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~~l~~E~~~-----------------l~a~i~E~lR  268 (384)
T 3oo3_A          208 --GAEISDEELAGLAEGNLIMAAEQMAAQLAVAVLLLVTHPDQMALLREKPEL-----------------IDSATEEVLR  268 (384)
T ss_dssp             --GGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHCGGG-----------------HHHHHHHHHH
T ss_pred             --CCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHCHHHHHHHHhCHHH-----------------HHHHHHHHHH
Confidence              346999999999999999999999999999999999999999999999754                 8999999999


Q ss_pred             CCCCCCC-ccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcccccCCCCCC
Q 012950          315 LYPPAVN-ISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPFSSGPRI  393 (452)
Q Consensus       315 l~p~~~~-~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~  393 (452)
                      ++|++|. .+|.+.+|++++||.||||+.|+++.+++||      +||++|+||||           ...++|||.|+|.
T Consensus       269 l~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~r------~dp~~F~PeR~-----------~~~~~~FG~G~r~  331 (384)
T 3oo3_A          269 HASIVEAPAPRVALADVRMAGRDIHAGDVLTCSMLATNR------APGDRFDITRE-----------KATHMAFGHGIHH  331 (384)
T ss_dssp             HHCSCSCCSCEEESSCEEETTEEECTTCEEEECHHHHHC------CTTCCCCTTCS-----------CCCCCTTCCSTTS
T ss_pred             hCCcccCCcceeeCCCEEECCEEECCCCEEEEehhhcCC------CCcceeCCCCC-----------CCCcCCCCCCCcC
Confidence            9999985 6999999999999999999999999999999      79999999995           2369999999999


Q ss_pred             CcchHHHHHHHHHHHHHHHhhc-EEEeCCCCcCCC-ce-eeEeecCCCceEEE
Q 012950          394 CVGLNFAATEAKIALSMILQRY-RFNLSPSYVHSP-VL-VVTLRPQHGLQVIF  443 (452)
Q Consensus       394 C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~-~~-~~~~~p~~~~~v~~  443 (452)
                      |+|++||.+|++++++.|+++| ++++.++..... .. ....++...++|++
T Consensus       332 C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~~lpv~~  384 (384)
T 3oo3_A          332 CIGAPLARLQLRVALPAVVGRFPSLRLAVPEEDLRFKPGRPAPFAVEELPLEW  384 (384)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCEECSSSSCCEESCCEEEC
T ss_pred             CCCHHHHHHHHHHHHHHHHHhCCCCeeCCCCccceeecccccccCcceeeeeC
Confidence            9999999999999999999999 999975422211 11 33445556777754


No 67 
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=100.00  E-value=7.8e-56  Score=430.26  Aligned_cols=353  Identities=15%  Similarity=0.220  Sum_probs=278.0

Q ss_pred             Cceeeec-cCcceEEeCCHHHHHHHHhcCCCCCC-C-CCc---hhh----HHhhhcCceeccCCccHHHHHhhhccccch
Q 012950            1 MNFLTWY-GSRAQLVITQPELIKEILSNSDGTYP-K-VQA---PGF----LRKILGDGLVTAGGENWHRQRKLATLAFYA   70 (452)
Q Consensus         1 ~~~~~~~-g~~~~vvv~~p~~~~~il~~~~~~f~-~-~~~---~~~----~~~~~g~~l~~~~~~~w~~~Rr~~~~~f~~   70 (452)
                      |||++++ |+.+.++++||+++++++.++  .|+ + ++.   ...    +....+.++++.   .|+++||++.+.|++
T Consensus        30 pv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~h~~~R~~~~~~fs~  104 (396)
T 1n40_A           30 PIRKVRTITGAEAWLVSSYALCTQVLEDR--RFSMKETAAAGAPRLNALTVPPEVVNNMGNI---ADAGLRKAVMKAITP  104 (396)
T ss_dssp             SEEEEECTTSCEEEEECSHHHHHHHHTCT--TEESGGGGSTTCCCSSCCSSCGGGGGHHHHH---HHTTCHHHHHHHTSS
T ss_pred             CeeEeecCCCceEEEEecHHHHHHHHhCC--CcccccCccccccccccccCCchhhhhhhhH---HHHHHHHHHHHhhCh
Confidence            6899997 899999999999999999865  365 4 321   111    112235566666   999999999999999


Q ss_pred             hhhhhhcchhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhHH-HHHHHHHHHhhcCCCcc
Q 012950           71 ESLRVTKSNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEFK-LLTSEIISRTAFGSSYL  149 (452)
Q Consensus        71 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~~-~~~~~~i~~~~fG~~~~  149 (452)
                      + ++                          .+.+.+.+++..+++.|... ++++|+...+. .+++++|+. +||.+++
T Consensus       105 ~-~~--------------------------~~~~~i~~~~~~l~~~l~~~-~~~~d~~~~~~~~~~~~vi~~-~~G~~~~  155 (396)
T 1n40_A          105 K-AP--------------------------GLEQFLRDTANSLLDNLITE-GAPADLRNDFADPLATALHCK-VLGIPQE  155 (396)
T ss_dssp             C-ST--------------------------THHHHHHHHHHHHHHHHHHH-CSCEETTTTTHHHHHHHHHHH-HHTCCGG
T ss_pred             H-HH--------------------------HhHHHHHHHHHHHHHHHHhc-CCCccHHHHHHHHhHHHHHHH-HhCCChh
Confidence            9 98                          99999999999999999752 56899987665 799999998 8999876


Q ss_pred             chhhHHHHHHhhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHH
Q 012950          150 EGESIFNKLTNMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLK  229 (452)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~  229 (452)
                      +.+++....    ..+..        .. ...|   .++..++.+.+ +++.+.++       ..   +..+|+++.|++
T Consensus       156 ~~~~~~~~~----~~~~~--------~~-~~~p---~~~~~~~~~~~-~~~~~~i~-------~~---~~~~dll~~ll~  208 (396)
T 1n40_A          156 DGPKLFRSL----SIAFM--------SS-ADPI---PAAKINWDRDI-EYMAGILE-------NP---NITTGLMGELSR  208 (396)
T ss_dssp             GHHHHHHTH----HHHTB--------CC-SSCC---HHHHHHHHHHH-HHHHHHHH-------CT---TCCSHHHHHHHH
T ss_pred             hHHHHHHHH----HHHhc--------cc-cCCC---HHHHHHHHHHH-HHHHHHHh-------CC---CCCCCHHHHHHH
Confidence            433222211    11110        00 0011   13444555566 66666665       11   134799999998


Q ss_pred             hcCCCCCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHHHHHHH
Q 012950          230 AYHDPDMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKTMSMVI  309 (452)
Q Consensus       230 ~~~~~~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i  309 (452)
                      ...+. .+..++++++++++..+++||+|||+++++|++++|++||++|+++++|+                 .||+|||
T Consensus       209 ~~~~~-~~~~l~~~~i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~-----------------~~l~a~i  270 (396)
T 1n40_A          209 LRKDP-AYSHVSDELFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKP-----------------ELIPAGV  270 (396)
T ss_dssp             HHTSG-GGTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCG-----------------GGHHHHH
T ss_pred             hhccc-ccCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcChHHHHHHHhCH-----------------HHHHHHH
Confidence            75210 13469999999999999999999999999999999999999999999984                 4899999


Q ss_pred             HHhhcCCCCCC-CccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcccccC
Q 012950          310 NESLRLYPPAV-NISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPFS  388 (452)
Q Consensus       310 ~E~lRl~p~~~-~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg  388 (452)
                      +|+||++|++| ..+|.+.+|++++||.||||+.|+++.+++||||++| +||++|+||||++          ..++|||
T Consensus       271 ~E~lRl~p~~~~~~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~~~----------~~~~~FG  339 (396)
T 1n40_A          271 EELLRINLSFADGLPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHF-PNPGSIELDRPNP----------TSHLAFG  339 (396)
T ss_dssp             HHHHHTCCCBCSCEEEEESSCEEETTEEECTTCEEEECHHHHHTCTTTS-SSTTSCCTTCSST----------TCSSTTC
T ss_pred             HHHHhhCCCcccccceecCCCeeECCEEECCCCEEEechHHhhCChhhC-CChhhCCCCCCCC----------CCCCCCC
Confidence            99999999999 6799999999999999999999999999999999999 9999999999963          3589999


Q ss_pred             CCCCCCcchHHHHHHHHHHHHHHHhhc-EEEeCCC-CcCCCceeeEeecCCCceEEE
Q 012950          389 SGPRICVGLNFAATEAKIALSMILQRY-RFNLSPS-YVHSPVLVVTLRPQHGLQVIF  443 (452)
Q Consensus       389 ~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~-~~~~~~~~~~~~p~~~~~v~~  443 (452)
                      .|+|.|+|++||.+|++++++.|+++| ++++.++ .........++++..+++|.|
T Consensus       340 ~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~l~~~~~~~~~~~~~~~~~~~~lpv~~  396 (396)
T 1n40_A          340 RGQHFCPGSALGRRHAQIGIEALLKKMPGVDLAVPIDQLVWRTRFQRRIPERLPVLW  396 (396)
T ss_dssp             CGGGCCTTHHHHHHHHHHHHHHHHHHCTTCEESSCGGGCCBCCSBSBCCBSCCEEEC
T ss_pred             CCCcCCCCHHHHHHHHHHHHHHHHHhCccccccCCccccccccccccCCcceeeeeC
Confidence            999999999999999999999999999 5999754 122222334556667888764


No 68 
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=100.00  E-value=9.2e-56  Score=425.21  Aligned_cols=340  Identities=19%  Similarity=0.190  Sum_probs=275.0

Q ss_pred             CceeeeccCcceEEeCCHHHHHHHHhcCCCCCCCCC-chh-hH-----H-hhhc----CceeccCCccHHHHHhhhcccc
Q 012950            1 MNFLTWYGSRAQLVITQPELIKEILSNSDGTYPKVQ-APG-FL-----R-KILG----DGLVTAGGENWHRQRKLATLAF   68 (452)
Q Consensus         1 ~~~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~~~-~~~-~~-----~-~~~g----~~l~~~~~~~w~~~Rr~~~~~f   68 (452)
                      |||+++ |   .+++++|+.+++||.+++ .|++++ ... .+     . .+.|    .++++.+|+.|+++||++.++|
T Consensus        13 pv~~~~-g---~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~~~~~f   87 (367)
T 3b4x_A           13 PVYYDG-K---VWNLFKYEDCKMVLNDHK-RFSSNLTGYNDKLEMLRSGKVFFDIPTRYTMLTSDPPLHDELRNLTADAF   87 (367)
T ss_dssp             SEEECS-S---SEEECSHHHHHHHHHCTT-TEECCCSSTTTTHHHHHHTCCCCCCGGGSSGGGCCTTHHHHHHHTTGGGG
T ss_pred             CceeeC-C---EEEEecHHHHHHHHcCch-hhccCcccccccccccccccchhhcccccccccCCchhHHHHHHHHHHhc
Confidence            577777 3   899999999999998764 786553 111 22     2 3344    7888899999999999999999


Q ss_pred             chhhhhhhcchhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhH-HHHHHHHHHHhhcCCC
Q 012950           69 YAESLRVTKSNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEF-KLLTSEIISRTAFGSS  147 (452)
Q Consensus        69 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~  147 (452)
                      ++++++                          .  +.+.+.+..+++.|.    +++|+...+ ..+++++|+. +||.+
T Consensus        88 s~~~l~--------------------------~--~~i~~~~~~l~~~l~----g~~d~~~~~~~~~~~~vi~~-~~G~~  134 (367)
T 3b4x_A           88 NPSNLP--------------------------V--DFVREVTVKLLSELD----EEFDVIESFAIPLPILVISK-MLGIN  134 (367)
T ss_dssp             SGGGSC--------------------------H--HHHHHHHHHHHHTCC----SEEEHHHHTTTHHHHHHHHH-HHTCC
T ss_pred             CHhhhc--------------------------c--hHHHHHHHHHHHhcc----CCcchHHHHHHhhHHHHHHH-HcCCC
Confidence            999998                          7  999999999999986    359999755 7999999999 79998


Q ss_pred             ccchhhHHHHHHhhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHH
Q 012950          148 YLEGESIFNKLTNMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLL  227 (452)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~l  227 (452)
                       ++.+.+......    +...  ....|..        .... ++.+.+.+++.+.++++++.        ..+|+++.|
T Consensus       135 -~~~~~~~~~~~~----~~~~--~~~~p~~--------~~~~-~~~~~~~~~~~~~i~~r~~~--------~~~dll~~l  190 (367)
T 3b4x_A          135 -PDVKKVKDWSDL----VALR--LGRADEI--------FSIG-RKYLELISFSKKELDSRKGK--------EIVDLTGKI  190 (367)
T ss_dssp             -CCHHHHHHHHHH----HHTT--TTSTTGG--------GCCC-HHHHHHHHHHHHHHHHHTTT--------CCSSHHHHH
T ss_pred             -CcHHHHHHHHHH----HHhc--cCCChhh--------HHHH-HHHHHHHHHHHHHHHHHhcC--------CCCCHHHHH
Confidence             543332222211    1111  0011211        1122 56677888888888776542        457999999


Q ss_pred             HHhcCCCCCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHHHHH
Q 012950          228 LKAYHDPDMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKTMSM  307 (452)
Q Consensus       228 l~~~~~~~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a  307 (452)
                      ++.        .++++++++++..+++||+|||+++++|++++|++ |++|+++++|++                   +|
T Consensus       191 l~~--------~ls~~el~~~~~~l~~AG~eTt~~~l~~~l~~L~~-P~~~~~l~~e~~-------------------~a  242 (367)
T 3b4x_A          191 ANS--------NLSELEKEGYFILLMIAGNETTTNLIGNAIEDFTL-YNSWDYVREKGA-------------------LK  242 (367)
T ss_dssp             HTS--------SSCHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHH-TTCHHHHHHHCS-------------------HH
T ss_pred             Hhc--------cCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhC-HHHHHHHHhCCc-------------------hH
Confidence            975        48999999999999999999999999999999999 999999999953                   89


Q ss_pred             HHHHhhcCCCCCCCccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCccccc
Q 012950          308 VINESLRLYPPAVNISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPF  387 (452)
Q Consensus       308 ~i~E~lRl~p~~~~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~F  387 (452)
                      ||+|+||++|+++..+|++.+|++++||.||||+.|+++.+++||||++| +||++|+||||.           ..++||
T Consensus       243 ~i~E~lRl~p~~~~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dp~~F~PeR~~-----------~~~l~F  310 (367)
T 3b4x_A          243 AVEEALRFSPPVMRTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVF-KDPDSFIPDRTP-----------NPHLSF  310 (367)
T ss_dssp             HHHHHHHHSCSBCCEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCSS-----------CCCCTT
T ss_pred             HHHHHHHhcCcccCeeEEeCCCeEECCEEECCCCEEEEChhhhcCCcccC-CCccccCCCCCC-----------CCCcCC
Confidence            99999999999997799999999999999999999999999999999999 999999999984           258999


Q ss_pred             CCCCCCCcchHHHHHHHHHHHHHHHhhc-EEEeCCCCcCCCceeeEeecCCCceEEEEE
Q 012950          388 SSGPRICVGLNFAATEAKIALSMILQRY-RFNLSPSYVHSPVLVVTLRPQHGLQVIFQP  445 (452)
Q Consensus       388 g~G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~  445 (452)
                      |.|+|.|+|++||++|++++++.|+++| ++++.++ ...  ....+++..+++|.+++
T Consensus       311 G~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~-~~~--~~~~~~~~~~lpv~~~~  366 (367)
T 3b4x_A          311 GSGIHLCLGAPLARLEARIALEEFAKKFRVKEIVKK-EKI--DNEVLNGYRKLVVRVER  366 (367)
T ss_dssp             CCSTTSCTTHHHHHHHHHHHHHHHHHHEEEEEEEEE-EEC--CCSSBCSEEEEEEEEEE
T ss_pred             CCCCccCccHHHHHHHHHHHHHHHHHhCCCceeCCc-ccc--ccccccCcceEEEEecC
Confidence            9999999999999999999999999999 7999754 222  23345565688888865


No 69 
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=100.00  E-value=1.8e-55  Score=427.22  Aligned_cols=357  Identities=16%  Similarity=0.215  Sum_probs=283.1

Q ss_pred             CceeeeccCcceEEeCCHHHHHHHHhcCCCCCCCCCchhhHHh--hhcCceeccCCccHHHHHhhhccccchhhhhhhcc
Q 012950            1 MNFLTWYGSRAQLVITQPELIKEILSNSDGTYPKVQAPGFLRK--ILGDGLVTAGGENWHRQRKLATLAFYAESLRVTKS   78 (452)
Q Consensus         1 ~~~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~~~~~~~~~~--~~g~~l~~~~~~~w~~~Rr~~~~~f~~~~l~~~~~   78 (452)
                      ||+++..|   .+++++++.+++++.++  .|+..+.......  ..+.++++.+|+.|+++||++.+.|+++.++    
T Consensus        34 pv~~~~~g---~~~v~~~~~v~~~l~d~--~fs~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~~~~~fs~~~~~----  104 (394)
T 2wiy_A           34 PVHKLEDG---TYLVSRYADVSHFAKLP--IMSVEPGWADAGPWAVASDTALGSDPPHHTVLRRQTNKWFTPKLVD----  104 (394)
T ss_dssp             SEEECTTS---CEEECCHHHHHHHTTST--TEECHHHHHTCGGGGGGGGSGGGCCTTHHHHHHHHHHTTCSHHHHH----
T ss_pred             CeEEecCC---eEEEcCHHHHHHHHcCC--CccccccccccccchhcccccccCCchHHHHHHHHHHhccCHHHHH----
Confidence            46666543   79999999999999753  4644321111111  1246788899999999999999999999999    


Q ss_pred             hhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhHHHHHHHHHHHhhcCCCccchhhHHHHH
Q 012950           79 NCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEFKLLTSEIISRTAFGSSYLEGESIFNKL  158 (452)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~  158 (452)
                                            .+.+.+.+.+.++++.|..  ++++|+...+..++.++++..+||.+.++.+.+...+
T Consensus       105 ----------------------~~~~~i~~~~~~l~~~~~~--~~~~d~~~~~~~~~~~vi~~~~~G~~~~~~~~~~~~~  160 (394)
T 2wiy_A          105 ----------------------GWVRTTRELVGDLLDGVEA--GQVIEARRDLAVVPTHVTMARVLQLPEDDADAVMEAM  160 (394)
T ss_dssp             ----------------------HHTHHHHHHHHHHHHTCCT--TCCEEHHHHHTHHHHHHHHHHHHTCCCCCHHHHHHHH
T ss_pred             ----------------------HHHHHHHHHHHHHHHHHhc--cCCeeHHHHHHhhhHHHHHHHHcCCCHhHHHHHHHHH
Confidence                                  9999999999999999874  5789999999999999999999998765433322211


Q ss_pred             HhhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHhcCCCCCCC
Q 012950          159 TNMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKAYHDPDMTK  238 (452)
Q Consensus       159 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~  238 (452)
                      .   ..+.   .....|..      ....+...+.+.+.+++.+.+++++..        ..+|+++.|++...+    .
T Consensus       161 ~---~~~~---~~~~~p~~------~~~~~~~~~~~~l~~~~~~~i~~rr~~--------~~~dll~~Ll~~~~~----~  216 (394)
T 2wiy_A          161 F---EAML---MQSAEPAD------GDVDRAAVAFGYLSARVAEMLEDKRVN--------PGDGLADSLLDAARA----G  216 (394)
T ss_dssp             H---HHHG---GGSSSCCT------THHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHHHHHT----T
T ss_pred             H---HHHH---hccCCccc------hHHHHHHHHHHHHHHHHHHHHHHhhcC--------CCCcHHHHHHHhhhc----C
Confidence            1   1110   01111111      112334455667778888888777642        346899999986532    2


Q ss_pred             CCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHHHHHHHHHhhcCCCC
Q 012950          239 RISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKTMSMVINESLRLYPP  318 (452)
Q Consensus       239 ~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~  318 (452)
                      .++++++.++++.+++||+|||+++++|++++|++||++|+++++|+                 +|+++||+|+||++|+
T Consensus       217 ~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~-----------------~~l~a~i~E~LRl~pp  279 (394)
T 2wiy_A          217 EITESEAIATILVFYAVGHMAIGYLIASGIELFARRPEVFTAFRNDE-----------------SARAAIINEMVRMDPP  279 (394)
T ss_dssp             SSCHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHCHHHHHHHHHCG-----------------GGHHHHHHHHHHHSCS
T ss_pred             CCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHCHHHHHHHHhCh-----------------HhHHHHHHHHHhhCCC
Confidence            59999999999999999999999999999999999999999999984                 5789999999999999


Q ss_pred             CCCccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcccccCCCCCCCcchH
Q 012950          319 AVNISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPFSSGPRICVGLN  398 (452)
Q Consensus       319 ~~~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~  398 (452)
                      ++..+|++.+|++++||.||||+.|+++.+++||||++| +||++|||+||++.         ..++|||.|+|.|+|++
T Consensus       280 ~~~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~-~dP~~F~p~R~~~~---------~~~l~FG~G~r~C~G~~  349 (394)
T 2wiy_A          280 QLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVF-DDPDVFDHTRPPAA---------SRNLSFGLGPHSCAGQI  349 (394)
T ss_dssp             BCEEEEEESSCEEETTEEECTTCCEEEEHHHHTTCTTTS-SSTTSCCTTCCGGG---------SCCSTTCCGGGSCTTHH
T ss_pred             ccCeeEEECCCEEEcCeecCCCCEEEeChHhhcCCcccC-CCccccCCCCCCCC---------CCccCCCCCCCcCCcHH
Confidence            998899999999999999999999999999999999999 99999999999742         25899999999999999


Q ss_pred             HHHHHHHHHHHHHHhhcE-EEeCCCCcCCCceeeEeecCCCceEEE
Q 012950          399 FAATEAKIALSMILQRYR-FNLSPSYVHSPVLVVTLRPQHGLQVIF  443 (452)
Q Consensus       399 ~a~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~p~~~~~v~~  443 (452)
                      ||.+|++++++.|+++|+ +++.++....  ....++....++|.+
T Consensus       350 lA~~e~~~~l~~ll~~~~~~~l~~~~~~~--~~~~~~g~~~lpv~~  393 (394)
T 2wiy_A          350 ISRAEATTVFAVLAERYERIELAEEPTVA--HNDFARRYRKLPIVL  393 (394)
T ss_dssp             HHHHHHHHHHHHHHHHCSCEEESSCCEEC--CCSSBCCEEECEEEE
T ss_pred             HHHHHHHHHHHHHHHhCCCceECCCCccc--ccccccCcceeeEEe
Confidence            999999999999999997 9997542221  123345555777765


No 70 
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=100.00  E-value=1.7e-55  Score=423.86  Aligned_cols=342  Identities=19%  Similarity=0.238  Sum_probs=272.2

Q ss_pred             CceeeeccCcceEEeCCHHHHHHHHhcCCCCCCCCCc-----hhhH--Hh--h---hcCceeccCCccHHHHHhhhcccc
Q 012950            1 MNFLTWYGSRAQLVITQPELIKEILSNSDGTYPKVQA-----PGFL--RK--I---LGDGLVTAGGENWHRQRKLATLAF   68 (452)
Q Consensus         1 ~~~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~~~~-----~~~~--~~--~---~g~~l~~~~~~~w~~~Rr~~~~~f   68 (452)
                      |||++  |  +.+++++|+++++++.++. .|++++.     ....  ..  .   .|.++++.+|+.|+++||++.++|
T Consensus        13 pv~~~--g--~~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~h~~~R~~~~~~f   87 (368)
T 1io7_A           13 PVYYD--G--NIWQVFSYRYTKEVLNNFS-KFSSDLTGYHERLEDLRNGKIRFDIPTRYTMLTSDPPLHDELRSMSADIF   87 (368)
T ss_dssp             SEEEC--S--SCEEECSHHHHHHHHHCTT-TEECCCSSHHHHHHHHTTTCCCCSCGGGSSGGGCCTTHHHHHHGGGTTTT
T ss_pred             CeEeE--C--CEEEEecHHHHHHHHcCcc-cccccccccccccccccccccccccccccccccCCChHHHHHHHHHHhhc
Confidence            46665  4  5899999999999999753 6866542     1101  11  1   226788899999999999999999


Q ss_pred             chhhhhhhcchhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhH-HHHHHHHHHHhhcCCC
Q 012950           69 YAESLRVTKSNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEF-KLLTSEIISRTAFGSS  147 (452)
Q Consensus        69 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~  147 (452)
                      ++++++                          .+.+.+.+.++.+++.| .  .+++|+...+ ..+++++|+.+ ||.+
T Consensus        88 ~~~~~~--------------------------~~~~~i~~~~~~l~~~l-~--~g~~d~~~~~~~~~~~~vi~~~-~G~~  137 (368)
T 1io7_A           88 SPQKLQ--------------------------TLETFIRETTRSLLDSI-D--PREDDIVKKLAVPLPIIVISKI-LGLP  137 (368)
T ss_dssp             CHHHHH--------------------------HHHHHHHHHHHHHHHTC-C--TTSEEHHHHTTTHHHHHHHHHH-HTCC
T ss_pred             CHHHHH--------------------------HHHHHHHHHHHHHHHHh-h--cCCccHHHHHHHHHHHHHHHHH-hCCC
Confidence            999999                          99999999999999999 5  3479999866 78999999999 9998


Q ss_pred             ccchhhHHHHHHhhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHH
Q 012950          148 YLEGESIFNKLTNMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLL  227 (452)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~l  227 (452)
                      +++.+.+......       . ...    . . .|. ..++..++.+.+.+++.+.+        .     ..+|+++.|
T Consensus       138 ~~~~~~~~~~~~~-------~-~~~----~-~-~p~-~~~~~~~~~~~~~~~~~~~i--------~-----~~~d~l~~l  189 (368)
T 1io7_A          138 IEDKEKFKEWSDL-------V-AFR----L-G-KPG-EIFELGKKYLELIGYVKDHL--------N-----SGTEVVSRV  189 (368)
T ss_dssp             GGGHHHHHHHGGG-------C-TTS----C-C-CTT-CHHHHHHHHHHHHHHHHHHT--------T-----SSCHHHHHH
T ss_pred             HHHHHHHHHHHHH-------H-Hhc----c-C-ChH-HHHHHHHHHHHHHHHHHHHh--------C-----CCCCHHHHH
Confidence            7643322211110       0 000    0 0 111 12334455556666665555        1     457999999


Q ss_pred             HHhcCCCCCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHHHHH
Q 012950          228 LKAYHDPDMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKTMSM  307 (452)
Q Consensus       228 l~~~~~~~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a  307 (452)
                      ++.        .++++++++++..+++||+|||+++++|++++|++|| +|+++++| +                 |++|
T Consensus       190 l~~--------~l~~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P-~~~~l~~E-~-----------------~l~a  242 (368)
T 1io7_A          190 VNS--------NLSDIEKLGYIILLLIAGNETTTNLISNSVIDFTRFN-LWQRIREE-N-----------------LYLK  242 (368)
T ss_dssp             HTS--------SCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTT-CHHHHHHH-T-----------------CHHH
T ss_pred             Hhc--------cCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCh-HHHHHHhc-c-----------------hHHH
Confidence            865        4899999999999999999999999999999999999 99999998 2                 6899


Q ss_pred             HHHHhhcCCCCCCCccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCccccc
Q 012950          308 VINESLRLYPPAVNISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPF  387 (452)
Q Consensus       308 ~i~E~lRl~p~~~~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~F  387 (452)
                      ||+|+||++|+++..+|.+.+|++++||.||||+.|+++.+++||||++| +||++|+|||+  +         ..++||
T Consensus       243 ~i~E~lRl~p~~~~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~-~dP~~F~PeR~--~---------~~~~~F  310 (368)
T 1io7_A          243 AIEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVF-HDGEKFIPDRN--P---------NPHLSF  310 (368)
T ss_dssp             HHHHHHHHSCSBCCEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTS-TTTTSCCTTCC--S---------CCCCTT
T ss_pred             HHHHHHHhCcccccCceeeCCCeeECCEEECCCCEEEecHhhhCCChhhC-CCcceeCCCCC--C---------CCCcCC
Confidence            99999999999997799999999999999999999999999999999999 99999999993  1         258999


Q ss_pred             CCCCCCCcchHHHHHHHHHHHHHHHhhcE-EEeCCCCcCCCceeeEeecCCCceEEEEEcc
Q 012950          388 SSGPRICVGLNFAATEAKIALSMILQRYR-FNLSPSYVHSPVLVVTLRPQHGLQVIFQPLS  447 (452)
Q Consensus       388 g~G~r~C~G~~~a~~~~~~~l~~ll~~f~-~~~~~~~~~~~~~~~~~~p~~~~~v~~~~r~  447 (452)
                      |.|+|.|+|++||.+|++++++.|+++|+ +++.+ ...  ....+.++..+++|.+++|+
T Consensus       311 G~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~~-~~~--~~~~~~~~~~~lpv~~~~r~  368 (368)
T 1io7_A          311 GSGIHLCLGAPLARLEARIAIEEFSKRFRHIEILD-TEK--VPNEVLNGYKRLVVRLKSNE  368 (368)
T ss_dssp             CCGGGSCTTHHHHHHHHHHHHHHHHTTCSEEEEEE-EEE--CCCSSBCCEEEEEEEEEC--
T ss_pred             CCCccCCCCHHHHHHHHHHHHHHHHHhCCCCEecC-cee--ccCCcccCCceeEEEeccCC
Confidence            99999999999999999999999999995 99864 111  11234556668999999885


No 71 
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=100.00  E-value=1.4e-55  Score=431.03  Aligned_cols=358  Identities=18%  Similarity=0.241  Sum_probs=283.1

Q ss_pred             CceeeeccCcceEEeCCHHHHHHHHhcCCCCCCCCC--ch-------hhHHhhhcCceeccCCccHHHHHhhhccccchh
Q 012950            1 MNFLTWYGSRAQLVITQPELIKEILSNSDGTYPKVQ--AP-------GFLRKILGDGLVTAGGENWHRQRKLATLAFYAE   71 (452)
Q Consensus         1 ~~~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~~~--~~-------~~~~~~~g~~l~~~~~~~w~~~Rr~~~~~f~~~   71 (452)
                      |++.+++|+.. ++|++++.+++|+.++.  |....  ..       .......+.++++.+|+.|+++||+++++|+++
T Consensus        46 pv~~~~~g~~~-~vv~~~~~v~~vL~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~~~Rr~~~~~fs~~  122 (416)
T 3p3o_A           46 EKSWIARTPLA-LLVLRYAEADQLARDKR--LISGFRGLVDMVGTPEGPVRDFMVDFLQSLDGADHRRLRGLATHPFTPR  122 (416)
T ss_dssp             HHCSEEECSSS-EEECSHHHHHHHHHCTT--EECSHHHHHHHHTCCSSHHHHHHHHSGGGCCHHHHHHHHHTTCGGGSHH
T ss_pred             CccccccCCCc-eEEeCHHHHHHHHcCcc--cccCCccccccccccccchhhhhcCccccCCchHHHHHHHHHHHhhCHH
Confidence            36677887766 99999999999998754  43221  10       012223456788999999999999999999999


Q ss_pred             hhhhhcchhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhH-HHHHHHHHHHhhcCCCccc
Q 012950           72 SLRVTKSNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEF-KLLTSEIISRTAFGSSYLE  150 (452)
Q Consensus        72 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~~~  150 (452)
                      .++                          .+.+.+.+.+..+++.| .  .+++|+...+ ..+++++|+. +||.+..+
T Consensus       123 ~l~--------------------------~~~~~i~~~~~~ll~~l-~--~g~~d~~~~~~~~~~~~vi~~-l~G~~~~~  172 (416)
T 3p3o_A          123 RIT--------------------------AVQPFVRSTVEQLIDKL-P--QGDFDFVQHFPHPLPALVMCQ-LLGFPLED  172 (416)
T ss_dssp             HHH--------------------------HHHHHHHHHHHHHHHTC-C--SSSEEHHHHTTTHHHHHHHHH-HHTCCGGG
T ss_pred             HHH--------------------------HHHHHHHHHHHHHHHhh-c--cCCccHHHHHHHHHHHHHHHH-HhCCCHHH
Confidence            999                          99999999999999999 4  4569965554 5699999998 58987654


Q ss_pred             hhhHHHHHHhhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHh
Q 012950          151 GESIFNKLTNMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKA  230 (452)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~  230 (452)
                      .+.+......    +..     .+..   ..+........++.+.+.+++.+.++++++.        ..+|+++.|++.
T Consensus       173 ~~~~~~~~~~----~~~-----~~~~---~~~~~~~~~~~~~~~~l~~~~~~~i~~rr~~--------~~~dll~~ll~~  232 (416)
T 3p3o_A          173 YDTVGRLSIE----TNL-----GLAL---SNDQDILVKVEQGLGRMFDYLVAAIEKRKVE--------PGDDLTSDIVRA  232 (416)
T ss_dssp             HHHHHHHHHT----TCG-----GGTT---CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHHH
T ss_pred             HHHHHHHHHH----HHh-----hccc---ccchhhHHHHHHHHHHHHHHHHHHHHHHHhC--------CCccHHHHHHHh
Confidence            3322221111    100     0110   0111223456677788888999998887753        467999999987


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHHHHHHHH
Q 012950          231 YHDPDMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKTMSMVIN  310 (452)
Q Consensus       231 ~~~~~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~  310 (452)
                      ..++    .++++++++++..+++||+|||+++++|++++|++||++|+++++|++                 |++++|+
T Consensus       233 ~~~~----~ls~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~~-----------------~l~a~i~  291 (416)
T 3p3o_A          233 FHDG----VLDDYELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIKENPE-----------------LAPQAVE  291 (416)
T ss_dssp             HHTT----SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG-----------------GHHHHHH
T ss_pred             hccC----CCCHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH-----------------HHHHHHH
Confidence            5432    699999999999999999999999999999999999999999999853                 7999999


Q ss_pred             HhhcCCCCCC-CccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcccccCC
Q 012950          311 ESLRLYPPAV-NISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPFSS  389 (452)
Q Consensus       311 E~lRl~p~~~-~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~  389 (452)
                      |+||++|++| ..+|++.+|++++||.||||+.|+++.+++||||++| +||++|||+||.          ...++|||.
T Consensus       292 E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~-~dp~~F~p~R~~----------~~~~l~FG~  360 (416)
T 3p3o_A          292 EVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVF-ADADRFDITVKR----------EAPSIAFGG  360 (416)
T ss_dssp             HHHHHSCSCSSCCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTC-TTTTSCCTTCCC----------SSCCCTTCC
T ss_pred             HHHhhccccccCcceEeCCCeEECCEEECCCCEEEEChHHhcCChhcc-CCccccCCCCCC----------CCCeecCCC
Confidence            9999999995 5699999999999999999999999999999999999 999999999973          235999999


Q ss_pred             CCCCCcchHHHHHHHHHHHHHHHhhc-EEEeCCCCcCCCceeeEeecCCCceEEEEE
Q 012950          390 GPRICVGLNFAATEAKIALSMILQRY-RFNLSPSYVHSPVLVVTLRPQHGLQVIFQP  445 (452)
Q Consensus       390 G~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~  445 (452)
                      |+|.|+|++||.+|++++++.|+++| ++++.++.....  ...++....++|.|+|
T Consensus       361 G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~l~~~~~~~~--~~~~~g~~~lpv~~~p  415 (416)
T 3p3o_A          361 GPHFCLGTALARLELTEAVAALATRLDPPQIAGEITWRH--ELGVAGPDALPLRFGA  415 (416)
T ss_dssp             STTSCTTHHHHHHHHHHHHHHHHHHSCCEEECSCCEECC--CTTCCCEEECEEEESC
T ss_pred             CCccCcCHHHHHHHHHHHHHHHHHhCCccccCCCCceec--CCCccCcceeeEEEec
Confidence            99999999999999999999999999 589875432221  1233444567887754


No 72 
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=100.00  E-value=1.3e-55  Score=420.42  Aligned_cols=315  Identities=18%  Similarity=0.222  Sum_probs=253.9

Q ss_pred             CceeeeccCcceEEeCCHHHHHHHHhcCCCCCCCCC-chhhHHhhhcCceeccCCccHHHHHhhhccccchhhhhhhcch
Q 012950            1 MNFLTWYGSRAQLVITQPELIKEILSNSDGTYPKVQ-APGFLRKILGDGLVTAGGENWHRQRKLATLAFYAESLRVTKSN   79 (452)
Q Consensus         1 ~~~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~~~-~~~~~~~~~g~~l~~~~~~~w~~~Rr~~~~~f~~~~l~~~~~~   79 (452)
                      |||++  |   .++++||+++++|+.++. .|++++ .... .. .+.++++.+|+.|+++||+++++|++++++     
T Consensus         6 pv~~~--g---~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~-~~-~~~~l~~~~g~~~~~~R~~~~~~fs~~~l~-----   72 (343)
T 2rfb_A            6 PVHYD--G---AWHVYKYSDVKHVLMNDK-IFSSNPGNRYS-NA-GGISFITMDNPEHKEFRDISAPYFLPSKIN-----   72 (343)
T ss_dssp             CEEET--T---EEEECSHHHHHHHHHCTT-TEESSCSSCCC-----CCGGGGCCHHHHHHHHHHHHHHHSHHHHG-----
T ss_pred             Ceeee--C---eEEEcCHHHHHHHHhChh-hcccCCcCCCC-Cc-cccccccCCchHHHHHHHHhhhhcCHHHHH-----
Confidence            46655  2   899999999999998764 685543 1122 22 467888899999999999999999999999     


Q ss_pred             hhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhH-HHHHHHHHHHhhcCCCccchhhHHHHH
Q 012950           80 CLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEF-KLLTSEIISRTAFGSSYLEGESIFNKL  158 (452)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~~~~~~~~~~~  158 (452)
                                           .+.+.+.++++.+++.|.     ++|+...+ ..+++++|+.+ ||.++++.+.+....
T Consensus        73 ---------------------~~~~~i~~~~~~l~~~l~-----~~d~~~~~~~~~~~~vi~~~-~G~~~~~~~~~~~~~  125 (343)
T 2rfb_A           73 ---------------------DYKDFIEETSNDLIKNID-----NKDIISEYAVRLPVNIISKI-LGIPDSDMPLFKLWS  125 (343)
T ss_dssp             ---------------------GGHHHHHHHHHHHHTTCT-----TSCHHHHTTTHHHHHHHHHH-HTCCGGGHHHHHHHH
T ss_pred             ---------------------HHHHHHHHHHHHHHHhcc-----ccCHHHHHhhhhhHHHHHHH-cCCCHHHHHHHHHHH
Confidence                                 999999999999998885     68988765 89999999998 998876433322211


Q ss_pred             HhhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHhcCCCCCCC
Q 012950          159 TNMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKAYHDPDMTK  238 (452)
Q Consensus       159 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~  238 (452)
                          ..+.    ....|.+   .   ...+. ++.+.+.+++.+.+               .+| ++.|++...+   +.
T Consensus       126 ----~~~~----~~~~p~~---~---~~~~~-~~~~~~~~~~~~~i---------------~~d-l~~ll~~~~~---~~  171 (343)
T 2rfb_A          126 ----DYII----GNKRDEN---F---NYVNN-RMVSRLLEIFKSDS---------------HGI-INVLAGSSLK---NR  171 (343)
T ss_dssp             ----HHHH----TSCCSSH---H---HHHHH-HHHHHHHHHHHSCC---------------SSH-HHHHHTCBCS---SS
T ss_pred             ----HHHh----hccCcch---h---hHHHH-HHHHHHHHHHHHHH---------------hcc-HHHHHhhhcC---CC
Confidence                1111    1111211   0   11122 33334444433332               357 8999876432   34


Q ss_pred             CCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHHHHHHHHHhhcCCCC
Q 012950          239 RISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKTMSMVINESLRLYPP  318 (452)
Q Consensus       239 ~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~  318 (452)
                      .++++++.+++..+++||+|||+++++|++++|++||++|+++++|+                    +|||+|+||++|+
T Consensus       172 ~l~~~ei~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~--------------------~a~i~E~lRl~p~  231 (343)
T 2rfb_A          172 KLTMDEKIKYIMLLIIGGNETTTNLIGNMIRVIDENPDIIDDALKNR--------------------SGFVEETLRYYSP  231 (343)
T ss_dssp             BCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHCH--------------------HHHHHHHHHHSCS
T ss_pred             CCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHcCc--------------------HHHHHHHHhhCcc
Confidence            69999999999999999999999999999999999999999999995                    8999999999999


Q ss_pred             C-CCccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcccccCCCCCCCcch
Q 012950          319 A-VNISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPFSSGPRICVGL  397 (452)
Q Consensus       319 ~-~~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~  397 (452)
                      + +..+|.+.+|++++||.||||+.|+++.+++||||++| +||++|+||||            ..++|||.|+|.|+|+
T Consensus       232 ~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~-~dp~~F~PeR~------------~~~~~FG~G~r~C~G~  298 (343)
T 2rfb_A          232 IQFLPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETFF-DEPDLFKIGRR------------EMHLAFGIGIHMCLGA  298 (343)
T ss_dssp             BCCBCCCEESSCEEETTEEECTTCEEEECHHHHTTCTTTS-SSTTSCCTTCS------------SCCCTTCCSTTSCTTH
T ss_pred             cccccceEECCCeEECCEEECCCCEEEEChhhhCCCcccC-CCccccCCCCC------------CCCccCCCCCccCCCh
Confidence            9 97799999999999999999999999999999999999 99999999994            2589999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhcE-EEeCCC
Q 012950          398 NFAATEAKIALSMILQRYR-FNLSPS  422 (452)
Q Consensus       398 ~~a~~~~~~~l~~ll~~f~-~~~~~~  422 (452)
                      +||.+|++++++.|+++|+ +++.++
T Consensus       299 ~lA~~e~~~~la~ll~~f~~~~~~~~  324 (343)
T 2rfb_A          299 PLARLEASIALNDILNHFKRIKIDYK  324 (343)
T ss_dssp             HHHHHHHHHHHHHHHHHCSCCCBCTT
T ss_pred             HHHHHHHHHHHHHHHHhCCCceeCCC
Confidence            9999999999999999996 999763


No 73 
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=100.00  E-value=4.6e-52  Score=405.32  Aligned_cols=353  Identities=15%  Similarity=0.216  Sum_probs=264.1

Q ss_pred             eccCcceEEeCCHHHHHHHHhcCCCCCCCCCc---hhhHHh--h-hcCceeccCCccHHHHHhhhccccchhhhhhhcch
Q 012950            6 WYGSRAQLVITQPELIKEILSNSDGTYPKVQA---PGFLRK--I-LGDGLVTAGGENWHRQRKLATLAFYAESLRVTKSN   79 (452)
Q Consensus         6 ~~g~~~~vvv~~p~~~~~il~~~~~~f~~~~~---~~~~~~--~-~g~~l~~~~~~~w~~~Rr~~~~~f~~~~l~~~~~~   79 (452)
                      |+++..+++|++++.++++|.++. .|+....   ......  . .+..+++.||++|+++||+++++|++++++     
T Consensus        51 ~~~~~~~~~vt~~~~v~~vl~d~~-~fs~~~~~~~~~~~~~~~~~~~~~~~~~Dg~~H~r~R~~~~~~Fs~~~l~-----  124 (412)
T 4dnj_A           51 YLDKWNVYGVARYAEVYAVLNDPL-TFCSSRGVGLSDFKKEKPWRPPSLILEADPPAHTRTRAVLSKVLSPATMK-----  124 (412)
T ss_dssp             EETTTTEEEECSHHHHHHHHTCTT-TEESTTCSSSSCTTTSCCSSCCCTTTTCCTTHHHHHHHHHHHHTCHHHHH-----
T ss_pred             EECCCCEEEECCHHHHHHHHcCCc-cccCCCccccccccccccccCCCccccCChHHHHHHHhhcccccCHHHHH-----
Confidence            567778999999999999998654 5633221   111111  1 124577889999999999999999999999     


Q ss_pred             hhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeeh-hhhHHHHHHHHHHHhhcCCCccchhhHHHHH
Q 012950           80 CLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEV-SQEFKLLTSEIISRTAFGSSYLEGESIFNKL  158 (452)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~-~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~  158 (452)
                                           .+.+.|.+.+.++++.+... ++++|+ .++...+..++++.+. |.+..+.+......
T Consensus       125 ---------------------~~~~~i~~~~~~l~~~~~~~-~~~~D~v~~~~~~~~~~~i~~l~-g~~~~~~~~~~~~~  181 (412)
T 4dnj_A          125 ---------------------RLRDGFAAAADAKIDELLAR-GGNIDAIADLAEAYPLSVFPDAM-GLKQEGRENLLPYA  181 (412)
T ss_dssp             ---------------------HHHHHHHHHHHHHHHHHHHT-TSEEETCCCCCCHHHHHHHHHHH-TCCSTTGGGHHHHH
T ss_pred             ---------------------HhhHHHHHHHHHHHHhhhcc-CCCceeHHHHHhhhhHhHHHHHc-CCchhhhhhhhhhh
Confidence                                 99999999999999998763 567886 4556667788777764 55443333322211


Q ss_pred             HhhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHhcCCCCCCC
Q 012950          159 TNMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKAYHDPDMTK  238 (452)
Q Consensus       159 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~  238 (452)
                      ..    +...     ....      .   ............+...+.+..++..      ...+.+..++....+   +.
T Consensus       182 ~~----~~~~-----~~~~------~---~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~~~~---~~  234 (412)
T 4dnj_A          182 GL----VFNA-----FGPP------N---ELRQSAIERSAPHQAYVAEQCQRPN------LAPGGFGACIHAFSD---TG  234 (412)
T ss_dssp             HH----HHHH-----TSCS------S---HHHHHHHHTCHHHHHHHHHHTSGGG------SCTTSHHHHHHHTTT---TT
T ss_pred             hc----cccc-----cccc------H---HHHHHHHHHHHHHHHHHHHHHHhhc------cccccchhhhHhhhh---cc
Confidence            11    1100     0000      0   0111111111222222222222211      234455666655443   35


Q ss_pred             CCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHHHHHHHHHhhcCCCC
Q 012950          239 RISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKTMSMVINESLRLYPP  318 (452)
Q Consensus       239 ~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~  318 (452)
                      .++++++++++..+++||+|||+++++|++++|++||++|+||++|                 ..++.++++|++|++|+
T Consensus       235 ~l~~~e~~~~~~~l~~AG~eTTa~~l~~~~~~L~~~P~~~~~Lr~~-----------------~~~~~~~~eE~lR~~pp  297 (412)
T 4dnj_A          235 EITPEEAPLLVRSLLSAGLDTTVNGIAAAVYCLARFPDEFARLRAD-----------------PSLARNAFEEAVRFESP  297 (412)
T ss_dssp             SSCTTHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHC-----------------GGGHHHHHHHHHHHHCS
T ss_pred             chhHHHHHHHHHHHHhccchhHHHHHHHHHHHHhhCHHHHHHHHhC-----------------ccccccccceeeeecCC
Confidence            7999999999999999999999999999999999999999999987                 46789999999999999


Q ss_pred             CCCccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcccccCCCCCCCcchH
Q 012950          319 AVNISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPFSSGPRICVGLN  398 (452)
Q Consensus       319 ~~~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~  398 (452)
                      ++..+|.+.+|++++||.||||+.|+++.+++||||++| +||++|+||||.           ..|+|||.|+|.|+|++
T Consensus       298 ~~~~~R~a~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~f-~dP~~F~PeR~~-----------~~~lpFG~G~r~CiG~~  365 (412)
T 4dnj_A          298 VQTFFRTTTRDVELAGATIGEGEKVLMFLGSANRDPRRW-DDPDRYDITRKT-----------SGHVGFGSGVHMCVGQL  365 (412)
T ss_dssp             BCEEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTS-SSTTSCCTTSCC-----------TTCCTTCCSTTSCTTHH
T ss_pred             cccccccCCCCeEECCccCCCCCeEEeehhhccCChhhC-CCccccCCCCCC-----------CCCCCcCCCCcCChhHH
Confidence            999999999999999999999999999999999999999 999999999973           24899999999999999


Q ss_pred             HHHHHHHHHHHHHHhhc-EEEeCCCCcCCCceeeEeecCCCceEEEEE
Q 012950          399 FAATEAKIALSMILQRY-RFNLSPSYVHSPVLVVTLRPQHGLQVIFQP  445 (452)
Q Consensus       399 ~a~~~~~~~l~~ll~~f-~~~~~~~~~~~~~~~~~~~p~~~~~v~~~~  445 (452)
                      ||++|++++|+.|+++| ++++.+...  .....++++..+++|+|+|
T Consensus       366 lA~~E~~~~l~~Ll~rf~~~~l~~~~~--~~~~~~~rg~~~LpV~~tP  411 (412)
T 4dnj_A          366 VARLEGEVVLAALARKVAAIEIAGPLK--RRFNNTLRGLESLPIQLTP  411 (412)
T ss_dssp             HHHHHHHHHHHHHHHHEEEEEECSCCE--EEECSSBEEEEECEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHCCCCeECCCCe--eecCCCccCCcceeEEEEe
Confidence            99999999999999999 899975422  2233456777789999987


No 74 
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=100.00  E-value=4.6e-53  Score=423.55  Aligned_cols=362  Identities=12%  Similarity=0.114  Sum_probs=260.9

Q ss_pred             ceeeeccCcce-------EEeCCHHHHHHHHhcCC----CCCCCCCchhhHHhhhc----CceeccCCccHHHHHhhhcc
Q 012950            2 NFLTWYGSRAQ-------LVITQPELIKEILSNSD----GTYPKVQAPGFLRKILG----DGLVTAGGENWHRQRKLATL   66 (452)
Q Consensus         2 ~~~~~~g~~~~-------vvv~~p~~~~~il~~~~----~~f~~~~~~~~~~~~~g----~~l~~~~~~~w~~~Rr~~~~   66 (452)
                      ||++++++.++       +++.+++..+.++....    +.+..... ... .++|    .+++..+|+.|+++|+++.+
T Consensus        69 Vf~~~l~~~~~vv~~p~~v~~~~~~~~~~l~~~~~v~k~~~~~~~~~-~~~-~l~g~~~~~~~~~~~g~~h~~~R~~~~~  146 (495)
T 3dsk_A           69 VYRVNMPPGAFIAENPQVVALLDGKSFPVLFDVDKVEKKDLLTGTYM-PST-ELTGGYRILSYLDPSEPKHEKLKNLLFF  146 (495)
T ss_dssp             EEEEECSCCTTTCSCCEEEEECSTTTGGGGGCTTTEECSSCTTSSSC-CCG-GGGTTCCCGGGCCTTSHHHHHHHHHHHH
T ss_pred             eEeecCCCCCCccCCCCEEEEeCCcceeeecccccccccccccccCC-CCc-cccCCCcceeeeCCCchHHHHHHHHHHH
Confidence            89999999888       66777777666664321    12211111 112 3444    34555789999999999999


Q ss_pred             ccchhhhhhhcchhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhc--CCceeehhhhHHHHHHHHHHHhhc
Q 012950           67 AFYAESLRVTKSNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHS--EGKEIEVSQEFKLLTSEIISRTAF  144 (452)
Q Consensus        67 ~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~--~~~~~d~~~~~~~~~~~~i~~~~f  144 (452)
                      .|++.. +                          .+.+.+++.+..+++.|...  +++++|+.+++..+++++++..+|
T Consensus       147 ~f~~~~-~--------------------------~~~~~i~~~~~~ll~~~~~~~~~~~~vdl~~~~~~~~~~~i~~~~~  199 (495)
T 3dsk_A          147 LLKSSR-N--------------------------RIFPEFQATYSELFDSLEKELSLKGKADFGGSSDGTAFNFLARAFY  199 (495)
T ss_dssp             HHHHTT-T--------------------------THHHHHHHHHHHHHHHHHHHHHHHSSEESHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHH-H--------------------------HHHHHHHHHHHHHHHHHHHHhccCCCccHHHHHHHHHHHHHHHHHc
Confidence            998754 6                          89999999999999999752  346899999999999999999999


Q ss_pred             CCCccchhhHHHHHHhhHHHHhhhhhhhccccccccccCCchh-----------hhhHHHHHHHHHHHHHHHHHHHHHhc
Q 012950          145 GSSYLEGESIFNKLTNMSFLASRNAYKIKIPLIGDFVKTSDDV-----------EGDKLEQGIRDSIIKMMKTREEKALK  213 (452)
Q Consensus       145 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~i~~~~~~~~~  213 (452)
                      |.++... +.......+.....   .....|.....+|.....           ......+...+++             
T Consensus       200 G~~~~~~-~~~~~~~~~~~~~~---~~~~~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------  262 (495)
T 3dsk_A          200 GTNPADT-KLKADAPGLITKWV---LFNLHPLLSIGLPRVIEEPLIHTFSLPPALVKSDYQRLYEFF-------------  262 (495)
T ss_dssp             SCCGGGS-TTTTCHHHHHHHHH---HHHHGGGCCCSSCHHHHHHHHSSSCCCGGGGHHHHHHHHHHH-------------
T ss_pred             CCCcchh-hhhhhHHHHHHHHH---HHhhhhHhHhccHHHHHHHHHHhhcccchhhhhhHHHHHHHH-------------
Confidence            9887643 21111111111111   111122221111100000           0001111111111             


Q ss_pred             CCCCCCCCcHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHH-HhhccchhHHHHHHHHHHhc-CcHHHHHHHHHHHHHhCC
Q 012950          214 GESEGYGNDYFGLLLKAYHDPDMTKRISLDVLIDECKTFY-IAGHETTTKLLTWTILLLAT-HTDWQEKLREEVLELFGQ  291 (452)
Q Consensus       214 ~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~l-~Ag~~tt~~~l~~~l~~l~~-~p~~~~~l~~Ei~~~~~~  291 (452)
                             .+.++.+++...    +.++++++++.+++.++ +||++||+.+++|++++|+. ||++|++|++|+++++++
T Consensus       263 -------~~~~~~ll~~~~----~~~l~~~ei~~~~~~~l~~ag~~tt~~~l~~~l~~L~~~~P~~~~~lr~Ei~~~~~~  331 (495)
T 3dsk_A          263 -------LESAGEILVEAD----KLGISREEATHNLLFATCFNTWGGMKILFPNMVKRIGRAGHQVHNRLAEEIRSVIKS  331 (495)
T ss_dssp             -------HHHCHHHHHHHH----HTTCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred             -------HHHHHHHHHHHH----hCCCCHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcc
Confidence                   112223333321    23689999998766665 99999999999999999996 999999999999999874


Q ss_pred             --CCCChhhccccHHHHHHHHHhhcCCCCCCCccccccceeec----CCeeeCCCcEEEecccccccCCCCCCCCCCCcC
Q 012950          292 --KNPAPDGIGKLKTMSMVINESLRLYPPAVNISRNVEREVRL----GKYILPANMELVIPILAIHHDPQIWGEDVDLFK  365 (452)
Q Consensus       292 --~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l----~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~  365 (452)
                        ..++++++.+||||+|||+|+||++|+++...|.+.+|+++    +||.||||+.|+++.+++||||++| +||++|+
T Consensus       332 ~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~a~~d~~l~~~~~g~~IpkG~~v~~~~~~~~~dp~~~-~dp~~F~  410 (495)
T 3dsk_A          332 NGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAAFKVKAGEMLYGYQPLATRDPKIF-DRADEFV  410 (495)
T ss_dssp             TTTCCCHHHHHTCHHHHHHHHHHHHHSCSSCEEEEEESSCEEEECSSCEEEECTTCEEEEEHHHHHTCTTTS-TTTTSCC
T ss_pred             CCCCCCHHHHhcCHHHHHHHHHHHhcCCCccccceeecCCeEeccCCCceEECCCCEEEeccHHhhCCcccC-CCccccC
Confidence              67999999999999999999999999999887889999999    5999999999999999999999999 9999999


Q ss_pred             CCCCCCccccCCC-----CCCCcccccCCCCCCCcchHHHHHHHHHHHHHHHhhcEEEeCC
Q 012950          366 PERFADGVAKASN-----NTPAAFLPFSSGPRICVGLNFAATEAKIALSMILQRYRFNLSP  421 (452)
Q Consensus       366 P~Rfl~~~~~~~~-----~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~l~~ll~~f~~~~~~  421 (452)
                      |+||++++.....     .....++|||+|+|.|+|++||.+|++++++.|+++|++...+
T Consensus       411 P~Rfl~~~~~~~~~~~~fg~G~~~~~fg~G~r~C~G~~lA~~e~~~~l~~ll~~f~~~~~~  471 (495)
T 3dsk_A          411 PERFVGEEGEKLLRHVLWSNGPETETPTVGNKQCAGKDFVVLVARLFVIEIFRRYDSFDIE  471 (495)
T ss_dssp             TTTTCHHHHHHGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHEEEEEEE
T ss_pred             CcccCCCCccchhhcccccCCcCcCCCCCCCCcCchHHHHHHHHHHHHHHHHHHCceEeCC
Confidence            9999975321100     0111244555566999999999999999999999999987643


No 75 
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=100.00  E-value=4e-52  Score=414.43  Aligned_cols=314  Identities=11%  Similarity=0.109  Sum_probs=240.1

Q ss_pred             CceeccCCccHHHHHhhhccccchhhhhhhcchhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhc--CCce
Q 012950           47 DGLVTAGGENWHRQRKLATLAFYAESLRVTKSNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHS--EGKE  124 (452)
Q Consensus        47 ~~l~~~~~~~w~~~Rr~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~--~~~~  124 (452)
                      .+++..+++.|+++|+++.+.|+++ ++                          .+.+.+.+.++.+++.|...  ++++
T Consensus       109 ~~~~~~~~~~h~~~R~~~~~~f~~~-~~--------------------------~~~~~i~~~~~~ll~~~~~~~~~~~~  161 (473)
T 3dan_A          109 LSYLDPSEPRHAQLKNLLFFMLKNS-SN--------------------------RVIPQFETTYTELFEGLEAELAKNGK  161 (473)
T ss_dssp             GGGCCTTSHHHHHHHHHHHHHHHHH-HH--------------------------HHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred             eeeeCCCcHHHHHHHHHHHHHHHHH-HH--------------------------HHHHHHHHHHHHHHHHHHHHhccCCc
Confidence            3456778999999999999999994 77                          99999999999999999752  2468


Q ss_pred             eehhhhHHHHHHHHHHHhhcCCCccchhhHHHHHHhhHHHHhhhhhhhccccccccccCCchh-----------hhhHHH
Q 012950          125 IEVSQEFKLLTSEIISRTAFGSSYLEGESIFNKLTNMSFLASRNAYKIKIPLIGDFVKTSDDV-----------EGDKLE  193 (452)
Q Consensus       125 ~d~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-----------~~~~~~  193 (452)
                      +|+.+++..+++++++.++||.+++. .+.......+.....   ....+|++...+|.....           ...+..
T Consensus       162 vdl~~~~~~~~~~~i~~~~~G~~~~~-~~~~~~~~~~~~~~~---~~~~~p~~~~~lp~~~~~~~~~~~~~~~~~~~~~~  237 (473)
T 3dan_A          162 AAFNDVGEQAAFRFLGRAYFNSNPEE-TKLGTSAPTLISSWV---LFNLAPTLDLGLPWFLQEPLLHTFRLPAFLIKSTY  237 (473)
T ss_dssp             EECHHHHHHHHHHHHHHHHHSCCGGG-STTTTCHHHHHHHHH---HHHHGGGCCCSCCHHHHHHHHSSSCCCGGGTHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHcCCCCCc-hhhhhhHHHHHHHHH---HHhccchhhhcchHHHHHHHhhhccchHhhhhhch
Confidence            99999999999999999999998875 222222222211111   111123221112200000           001111


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHH-HhhccchhHHHHHHHHHHh
Q 012950          194 QGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKAYHDPDMTKRISLDVLIDECKTFY-IAGHETTTKLLTWTILLLA  272 (452)
Q Consensus       194 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~~~~~~l-~Ag~~tt~~~l~~~l~~l~  272 (452)
                      +.+.+.+                    .|+++.+++...+    .++++++++++++.++ +||++||+++++|++++|+
T Consensus       238 ~~~~~~~--------------------~~~~~~ll~~~~~----~~l~~~ei~~~~l~~~g~~~~~tta~~l~~~l~~L~  293 (473)
T 3dan_A          238 NKLYDYF--------------------QSVATPVMEQAEK----LGVPKDEAVHNILFAVCFNTFGGVKILFPNTLKWIG  293 (473)
T ss_dssp             HHHHHHH--------------------HHHCHHHHHHHHH----HTCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred             hhhHHHH--------------------HHHHHHHHHhHhh----cCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHH
Confidence            1222221                    1334444443221    3689999999886666 7888889999999999999


Q ss_pred             c-CcHHHHHHHHHHHHHhCC---CCCChhhccccHHHHHHHHHhhcCCCCCCCccccccceeec----CCeeeCCCcEEE
Q 012950          273 T-HTDWQEKLREEVLELFGQ---KNPAPDGIGKLKTMSMVINESLRLYPPAVNISRNVEREVRL----GKYILPANMELV  344 (452)
Q Consensus       273 ~-~p~~~~~l~~Ei~~~~~~---~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l----~g~~Ip~g~~v~  344 (452)
                      + ||++|++|++|+++++++   ..++.+++++||||+|||+|+||++|+++...|.+.+|+++    +||.||||+.|.
T Consensus       294 ~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~r~~~~d~~l~~~~~g~~Ip~G~~v~  373 (473)
T 3dan_A          294 LAGENLHTQLAEEIRGAIKSYGDGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFTIESHDATFEVKKGEMLF  373 (473)
T ss_dssp             HHCHHHHHHHHHHHHHHHHHHSTTSCCHHHHHTCHHHHHHHHHHHHHSCSSCEEEEEESSCEEEECSSCEEEECTTCEEE
T ss_pred             hcCHHHHHHHHHHHHHHhhcccCCCCCHHHHhcCchHHHHHHHHHhcCCCcccccccccCCcEeecCCCceEeCCCCEEE
Confidence            9 799999999999999876   68999999999999999999999999999887779999999    999999999999


Q ss_pred             ecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcccccC---------CCCCCCcchHHHHHHHHHHHHHHHhhc
Q 012950          345 IPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPFS---------SGPRICVGLNFAATEAKIALSMILQRY  415 (452)
Q Consensus       345 ~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg---------~G~r~C~G~~~a~~~~~~~l~~ll~~f  415 (452)
                      ++.+++||||++| +||++|||+||++...     ....+++||         +|+|.|+|++||.+|++++++.|+++|
T Consensus       374 ~~~~~~~~dp~~~-~dp~~F~p~R~~~~~~-----~~~~~~~fg~G~~~~~Fg~G~~~C~G~~lA~~e~~~~l~~ll~~f  447 (473)
T 3dan_A          374 GYQPFATKDPKVF-DRPEEYVPDRFVGDGE-----ALLKYVWWSNGPETESPTVENKQCAGKDFVVLITRLFVIELFRRY  447 (473)
T ss_dssp             EEHHHHTTCTTTS-SSTTSCCTTTTSGGGG-----GGGGGCCTTSSCTTSCCCTTSCSCTTHHHHHHHHHHHHHHHHHHE
T ss_pred             echHHhhCCchhc-CCcccCCccccCCCcc-----cccccceecCCcCcCCCCCCCCCCCcHHHHHHHHHHHHHHHHHhC
Confidence            9999999999999 9999999999997622     223444554         555999999999999999999999999


Q ss_pred             EEEeCC
Q 012950          416 RFNLSP  421 (452)
Q Consensus       416 ~~~~~~  421 (452)
                      ++...+
T Consensus       448 ~~~~~~  453 (473)
T 3dan_A          448 DSFEIE  453 (473)
T ss_dssp             EEEEEE
T ss_pred             CeEEcc
Confidence            976543


No 76 
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=100.00  E-value=1.9e-49  Score=386.34  Aligned_cols=349  Identities=14%  Similarity=0.173  Sum_probs=262.9

Q ss_pred             ceEEeCCHHHHHHHHhcCCCCCCCCCch--hhHHhhhcCceeccCCccHHHHHhhhccccchhhhhhhcchhhhhHHHHH
Q 012950           11 AQLVITQPELIKEILSNSDGTYPKVQAP--GFLRKILGDGLVTAGGENWHRQRKLATLAFYAESLRVTKSNCLMFKLKSV   88 (452)
Q Consensus        11 ~~vvv~~p~~~~~il~~~~~~f~~~~~~--~~~~~~~g~~l~~~~~~~w~~~Rr~~~~~f~~~~l~~~~~~~~~~~~~~~   88 (452)
                      .+++|++++.+++|+.+.. .|+.....  .......+..++..|+++|+++||+++++|++++++              
T Consensus        62 g~W~vtr~~dv~~vl~d~~-~fs~~~~~~~~~~~~~~~~~~~~~D~p~H~r~Rrll~~~Fs~~~l~--------------  126 (417)
T 4dxy_A           62 GHWIATNGDTVKEVYSDPT-RFSSEVIFLPKEAGEKAQMVPTKMDPPEHTPYRKALDKGLNLAKIR--------------  126 (417)
T ss_dssp             SEEEECSHHHHHHHHTCTT-TEESSCCSSSTTSSCSSCTTTTTCCTTTHHHHHHHHHHHHCHHHHH--------------
T ss_pred             CEEEECCHHHHHHHHcCch-hccCCCcccccccccccccCcccCCcHHHHHHHHHhhhhcCHHHHH--------------
Confidence            5789999999999998754 77543311  111111123455679999999999999999999999              


Q ss_pred             HHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhHHH-HHHHHHHHhhcCCCccchhhHHHHHHhhHHHHhh
Q 012950           89 IVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEFKL-LTSEIISRTAFGSSYLEGESIFNKLTNMSFLASR  167 (452)
Q Consensus        89 ~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~~~-~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~  167 (452)
                                  .+.+.|++.++++++.+..  .+++|+...+.. +...+++ .++|....+.+.+    ..+...+..
T Consensus       127 ------------~~~~~i~~~~~~lld~l~~--~g~~D~v~~~a~~l~~~vi~-~llg~~~~d~~~~----~~~~~~~~~  187 (417)
T 4dxy_A          127 ------------KVEDKVREVASSLIDSFAA--RGECDFAAEYAELFPVHVFM-ALADLPLEDIPVL----SEYARQMTR  187 (417)
T ss_dssp             ------------TTHHHHHHHHHHHHHHHHT--TSEEEHHHHTTTTHHHHHHH-HHTTCCGGGHHHH----HHHHHHHHS
T ss_pred             ------------HHHHHHHHHHHHHHHHhhh--cCCeeeHHHHHhhhHHHHHH-HHcCCCHHHHHHH----Hhhhhhhcc
Confidence                        9999999999999999986  578897666544 5555555 4578766543322    222111110


Q ss_pred             hhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHhcCCCCCCCCCCHHHHHH
Q 012950          168 NAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKAYHDPDMTKRISLDVLID  247 (452)
Q Consensus       168 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l~~~~i~~  247 (452)
                            ..   ...+.........+...+..++.+.++++++.        ..+|+++.|+....+   +..++++++.+
T Consensus       188 ------~~---~~~~~~~~~~~~~~~~~~~~~~~~li~~rr~~--------~~ddl~s~L~~~~~~---~~~~~~~e~~~  247 (417)
T 4dxy_A          188 ------PE---GNTPEEMATDLEAGNNGFYAYVDPIIRARVGG--------DGDDLITLMVNSEIN---GERIAHDKAQG  247 (417)
T ss_dssp             ------CC---CSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--------CCCSHHHHHHTCEET---TEECCHHHHHH
T ss_pred             ------cc---ccChHHHHHHHHHHHHHHHHHHHHHHHHHhcC--------Cccchhhhhcccccc---CCccchhHHHH
Confidence                  00   11111222344455666777777777665431        568999999876543   35789999999


Q ss_pred             HHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHHHHHHHHHhhcCCCCCCCcccccc
Q 012950          248 ECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKTMSMVINESLRLYPPAVNISRNVE  327 (452)
Q Consensus       248 ~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~E~lRl~p~~~~~~r~~~  327 (452)
                      ++..+++||+|||+++++|++++|++||++++++++|...+                  ....|.+|++++.+..+|.+.
T Consensus       248 ~~~~ll~AG~eTTa~~l~~~~~~L~~~P~~~~~l~~e~~~~------------------~~avee~~~~~~~~~~~R~a~  309 (417)
T 4dxy_A          248 LISLLLLGGLDTVVNFLSFFMIHLARHPELVAELRSDPLKL------------------MRGAEEMFRRFPVVSEARMVA  309 (417)
T ss_dssp             HHHHHHHHTTHHHHHHHHHHHHHHHTCHHHHHHHHHCHHHH------------------HHTHHHHHHHSCCBEEEEEEC
T ss_pred             HHHHHHhhcccchhhHHHHHHHHHHhCchhhhhhccCcccc------------------ccceeeeeccccccccccccc
Confidence            99999999999999999999999999999999999985433                  233355555565566789999


Q ss_pred             ceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcccccCCCCCCCcchHHHHHHHHHH
Q 012950          328 REVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPFSSGPRICVGLNFAATEAKIA  407 (452)
Q Consensus       328 ~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~a~~~~~~~  407 (452)
                      +|++++|+.||+|+.|+++.+++||||++| +||++|||+|+           +..|+|||.|+|.|+|++||++|++++
T Consensus       310 ~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~f-~dP~~FdpeR~-----------~~~~l~FG~G~r~ClG~~LA~~E~~i~  377 (417)
T 4dxy_A          310 KDQEYKGVFLKRGDMILLPTALHGLDDAAN-PEPWKLDFSRR-----------SISHSTFGGGPHRCAGMHLARMEVIVT  377 (417)
T ss_dssp             SCEEETTEEECTTCEEEEETHHHHTCTTTS-SSTTSCCTTCS-----------CCCCCTTCCGGGSCTTHHHHHHHHHHH
T ss_pred             cceEecCccccCCCEEEEeehhhcCChhhC-CCccccCCCCC-----------CCCCCCcCCCcccCccHHHHHHHHHHH
Confidence            999999999999999999999999999999 99999999993           235899999999999999999999999


Q ss_pred             HHHHHhhc-EEEeCCCCcCCCceeeEeecCCCceEEEE
Q 012950          408 LSMILQRY-RFNLSPSYVHSPVLVVTLRPQHGLQVIFQ  444 (452)
Q Consensus       408 l~~ll~~f-~~~~~~~~~~~~~~~~~~~p~~~~~v~~~  444 (452)
                      |+.|+++| +++++++... ......++....++|+|.
T Consensus       378 l~~Ll~rfp~~~l~~~~~~-~~~~~~~~g~~~LPv~~~  414 (417)
T 4dxy_A          378 LEEWLKRIPEFSFKEGETP-IYHSGIVAAVENVPLVWP  414 (417)
T ss_dssp             HHHHHHHCSSCEECTTCCC-EEECSSBCEEECCEEECC
T ss_pred             HHHHHHhCCCceeCCCCCe-eecCCcccCceeeeEEee
Confidence            99999999 9999866332 222334455567888873


No 77 
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00  E-value=1.9e-43  Score=336.99  Aligned_cols=279  Identities=14%  Similarity=0.190  Sum_probs=191.2

Q ss_pred             CceeeeccCcceEEeCCHHHHHHHHhcCCCCCCCCCc-h-hh-------HHhhhcCceeccCCccHHHHHhhhccccchh
Q 012950            1 MNFLTWYGSRAQLVITQPELIKEILSNSDGTYPKVQA-P-GF-------LRKILGDGLVTAGGENWHRQRKLATLAFYAE   71 (452)
Q Consensus         1 ~~~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~~~~-~-~~-------~~~~~g~~l~~~~~~~w~~~Rr~~~~~f~~~   71 (452)
                      ||+.+.   .+.+++++++.+++|+.+ . .|++... . ..       ... ++.++++.|++.|       .++|+ .
T Consensus        72 pV~~~~---~~~~vv~~~~~v~~vl~d-~-~f~~~~~~~~~~~~~~~~~~~~-~~~~l~~~dg~~H-------~~~Ft-~  137 (381)
T 2yjn_B           72 GVRRSR---TETWVVADHATARQVLDD-P-AFTRATGRTPEWMRAAGAPPAE-WAQPFRDVHAASW-------EGEVP-D  137 (381)
T ss_dssp             CEEECS---SSCEEECSHHHHHHHHHC-S-SEESSCCCCCHHHHHHTCCHHH-HTHHHHHHHHCCC-------CSCCC-C
T ss_pred             CceeCC---CCEEEEcCHHHHHHHHcC-C-CcCCCcccccccccccccccch-hhhhhhhCCchhh-------hhccC-C
Confidence            455443   468999999999999986 3 5755421 1 11       111 2456778889999       56666 2


Q ss_pred             hhhhhcchhhhhHHHHHHHHhhhccccccccHHHHHHHHHHHHHHhhhcCCceeehhhhH-HHHHHHHHHHhhcCCCccc
Q 012950           72 SLRVTKSNCLMFKLKSVIVMLFNVFAPMQDMIPAMVASVEIMLKRWRHSEGKEIEVSQEF-KLLTSEIISRTAFGSSYLE  150 (452)
Q Consensus        72 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~d~~~~~-~~~~~~~i~~~~fG~~~~~  150 (452)
                        .                             +.|++.++++++.|.    +++|+...+ ..+++++|+.+ ||.+.++
T Consensus       138 --~-----------------------------~~i~~~~~~ll~~~~----g~~Dl~~~~a~~l~~~vi~~l-~G~~~~~  181 (381)
T 2yjn_B          138 --V-----------------------------GELAESFAGLLPGAG----ARLDLVGDFAWQVPVQGMTAV-LGAAGVL  181 (381)
T ss_dssp             --C-----------------------------SCHHHHTSTTSCC----------CCCCCCTHHHHHHHHTC------CC
T ss_pred             --h-----------------------------HHHHHHHHHHHHhcc----CcchHHHHHHHHHHHHHHHHH-cCCCHHH
Confidence              3                             234555666666664    478998665 69999999995 9998764


Q ss_pred             hhhHHHHHHhhHHHHhhhhhhhccccccccccCCchhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHh
Q 012950          151 GESIFNKLTNMSFLASRNAYKIKIPLIGDFVKTSDDVEGDKLEQGIRDSIIKMMKTREEKALKGESEGYGNDYFGLLLKA  230 (452)
Q Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~l~~ll~~  230 (452)
                      . +       +...+.... .  .+     ++..   ...+.    .+.+        .                .    
T Consensus       182 ~-~-------~~~~~~~~~-~--~~-----~~~~---~~~~~----~~~~--------~----------------~----  210 (381)
T 2yjn_B          182 R-G-------AAWDARVSL-D--AQ-----LSPQ---QLAVT----EAAV--------A----------------A----  210 (381)
T ss_dssp             H-H-------HHHHHTTHH-H--HT-----TSCC---CHHHH----HHHH--------H----------------H----
T ss_pred             H-H-------HHHHHHHhc-c--CC-----CCHH---HHHHH----HHHH--------H----------------H----
Confidence            3 1       111111000 0  00     0000   00000    0000        0                0    


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHhhccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChhhccccHHHHHHHH
Q 012950          231 YHDPDMTKRISLDVLIDECKTFYIAGHETTTKLLTWTILLLATHTDWQEKLREEVLELFGQKNPAPDGIGKLKTMSMVIN  310 (452)
Q Consensus       231 ~~~~~~~~~l~~~~i~~~~~~~l~Ag~~tt~~~l~~~l~~l~~~p~~~~~l~~Ei~~~~~~~~~~~~~~~~lp~l~a~i~  310 (452)
                               +..    ++++.+++||+|||+++++|++++|++||+++++|++|+                 .|++++|+
T Consensus       211 ---------l~~----~~~~~ll~aG~eTt~~~l~~~l~~L~~~P~~~~~l~~e~-----------------~~l~~~i~  260 (381)
T 2yjn_B          211 ---------LPA----DPALRALFAGAEMTANTVVDAVLAVSAEPGLAERIADDP-----------------AAAQRTVA  260 (381)
T ss_dssp             ---------CC------CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCC-----------------C--HHHHH
T ss_pred             ---------HHH----HHHHHHHHHhhhHHHHHHHHHHHHHHHCHHHHHHHhhCH-----------------HHHHHHhC
Confidence                     000    578899999999999999999999999999999999984                 28999999


Q ss_pred             HhhcCCCCCCCccccccceeecCCeeeCCCcEEEecccccccCCCCCCCCCCCcCCCCCCCccccCCCCCCCcccccCCC
Q 012950          311 ESLRLYPPAVNISRNVEREVRLGKYILPANMELVIPILAIHHDPQIWGEDVDLFKPERFADGVAKASNNTPAAFLPFSSG  390 (452)
Q Consensus       311 E~lRl~p~~~~~~r~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~g~~p~~F~P~Rfl~~~~~~~~~~~~~~~~Fg~G  390 (452)
                      |+||++|+++..+|.+.+|++++|+.||||+.|+++.+++||||++| +||++|||+||++          ..++|||.|
T Consensus       261 E~LR~~pp~~~~~R~a~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~~-~dp~~F~p~R~~~----------~~~l~FG~G  329 (381)
T 2yjn_B          261 EVLRLHPALHLERRTATAEVRLGEHVIGEGEEVVVVVAAANRDPEVF-AEPDRLDVDRPDA----------DRALSAHRG  329 (381)
T ss_dssp             HHHHHSCSCSEEEEEESSCEESSSCEECTTCEEEEEHHHHTTCTTTS-SSTTSCCSSCSCC----------CCCCC----
T ss_pred             eeeeecCCCcceeEEECCCeEECCEEECCCCEEEeCHHHHcCCcccC-CCccccCCCCCCC----------CCccCCCCC
Confidence            99999999998899999999999999999999999999999999999 9999999999973          369999999


Q ss_pred             CCCCcchHHHHHHHHHHHHHHHhhc-EEEeCCC
Q 012950          391 PRICVGLNFAATEAKIALSMILQRY-RFNLSPS  422 (452)
Q Consensus       391 ~r~C~G~~~a~~~~~~~l~~ll~~f-~~~~~~~  422 (452)
                       |.|+|++||.+|++++++.|+++| ++++.++
T Consensus       330 -h~C~G~~lA~~e~~~~l~~ll~~~p~~~l~~~  361 (381)
T 2yjn_B          330 -HPGRLEELVTALATAALRAAAKALPGLTPSGP  361 (381)
T ss_dssp             -CCSSHHHHHHHHHHHHHHHTTTTCCC-----C
T ss_pred             -CCCchHHHHHHHHHHHHHHHHHhCCCcEECCC
Confidence             999999999999999999999999 9998754


No 78 
>1m46_B IQ4, IQ4 motif from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle protein; 2.10A {Saccharomyces cerevisiae}
Probab=23.85  E-value=62  Score=15.99  Aligned_cols=12  Identities=33%  Similarity=0.620  Sum_probs=9.6

Q ss_pred             HHHHHHHHHHHH
Q 012950          276 DWQEKLREEVLE  287 (452)
Q Consensus       276 ~~~~~l~~Ei~~  287 (452)
                      +.|+++|+|+..
T Consensus         8 nlqkkirkelkq   19 (26)
T 1m46_B            8 NLQKKIRKELKQ   19 (26)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            678999999853


No 79 
>3ijw_A Aminoglycoside N3-acetyltransferase; anthrax, COA, acyltransferase, structural genom center for structural genomics of infectious diseases; HET: MSE ACO; 1.90A {Bacillus anthracis} SCOP: c.140.1.0 PDB: 3slf_A* 3n0s_A* 3slb_A* 3n0m_A* 3kzl_A* 3e4f_A*
Probab=22.05  E-value=47  Score=29.01  Aligned_cols=23  Identities=13%  Similarity=0.199  Sum_probs=19.7

Q ss_pred             CCCcEEEecccccccCCCCCCCCC
Q 012950          338 PANMELVIPILAIHHDPQIWGEDV  361 (452)
Q Consensus       338 p~g~~v~~~~~~~~~d~~~~g~~p  361 (452)
                      |.||.|+.....-+.||+.| .+|
T Consensus        64 ~~GTLvmPt~t~~~~dp~~w-~~p   86 (268)
T 3ijw_A           64 EEGTIIMPTQSSDLSDPKHW-SRP   86 (268)
T ss_dssp             TTSEEEEECCCGGGSCGGGC-CSS
T ss_pred             CCCeEEEeccccccCChhhh-cCC
Confidence            68998988887888899999 777


Done!