BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012954
(452 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255558644|ref|XP_002520347.1| s-adenosyl-methyltransferase mraw, putative [Ricinus communis]
gi|223540566|gb|EEF42133.1| s-adenosyl-methyltransferase mraw, putative [Ricinus communis]
Length = 405
Score = 528 bits (1361), Expect = e-147, Method: Compositional matrix adjust.
Identities = 256/361 (70%), Positives = 302/361 (83%), Gaps = 7/361 (1%)
Query: 92 KEKRRTRSNKDYDYESIIQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAI 151
KEKRRTRS+K+++Y ++ +H+PV+LGEV+DVFSS + SFVDCTLGAAGHSSAI
Sbjct: 52 KEKRRTRSDKEFEY-----KENDNHVPVLLGEVIDVFSSLH-LRSFVDCTLGAAGHSSAI 105
Query: 152 IRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDE 211
I+ HPEL+ ++G+DVDP A AKARA ++ L+H + HLK HTF NF+H+K +L ++D
Sbjct: 106 IKGHPELENYVGMDVDPVAHAKARACIDDLMHSHS-CHLKVHTFLSNFKHVKPLLAEVDP 164
Query: 212 NILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEV 271
N SGVDAILMDLGMSSMQVNNPERGFSVL +GPLDMRMDPQASLKAEDILNSWPD EV
Sbjct: 165 NFFNSGVDAILMDLGMSSMQVNNPERGFSVLANGPLDMRMDPQASLKAEDILNSWPDTEV 224
Query: 272 GRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRV 331
GRVLREYGEESNWHLLQNKIVQARLRGGLH+TG+LVDLI+++T G RG RQGWIKTATRV
Sbjct: 225 GRVLREYGEESNWHLLQNKIVQARLRGGLHTTGDLVDLIRNMTHGTRGGRQGWIKTATRV 284
Query: 332 FQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDA 391
FQALRIAVNDEL TLE +L+ACF+CLAPGGRL VISFHSLEDRIVKQTFL +I+ R D
Sbjct: 285 FQALRIAVNDELGTLEKTLNACFECLAPGGRLAVISFHSLEDRIVKQTFLKVIETGRGDG 344
Query: 392 EGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ +EEE N E WI+ ++QG NG+ILTKRP+TPS EEERLN R RSAKLRV++K
Sbjct: 345 DADEEERFGRDSRNSEEMWIKSVVQGRNGRILTKRPVTPSEEEERLNRRSRSAKLRVVEK 404
Query: 452 I 452
+
Sbjct: 405 V 405
>gi|225429894|ref|XP_002283626.1| PREDICTED: ribosomal RNA small subunit methyltransferase H-like
[Vitis vinifera]
Length = 444
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 263/375 (70%), Positives = 304/375 (81%), Gaps = 17/375 (4%)
Query: 92 KEKRRTRSNKDYDYE-SIIQQQQSSHIPVMLGEVLDVFSSSRT------ITSFVDCTLGA 144
K K+RTRS++++D E +++ ++H+PVMLGEVL+VFSS + + SFVDCTLGA
Sbjct: 71 KLKKRTRSDREFDKEQAMVYGGTATHVPVMLGEVLEVFSSFSSSSSSSPLRSFVDCTLGA 130
Query: 145 AGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKS 204
AGHSSAII+AHPEL+L++G+DVDP A KA+A + SL +H LK HTF +NF++IKS
Sbjct: 131 AGHSSAIIQAHPELELYVGMDVDPIAHEKAQARIRSLCGDSSH--LKAHTFMRNFKNIKS 188
Query: 205 VLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILN 264
VL ++DE +L SGVD ILMDLGMSSMQVNN ERGFSVL +GPLDMRMDPQASL AEDILN
Sbjct: 189 VLREVDEELLSSGVDGILMDLGMSSMQVNNAERGFSVLANGPLDMRMDPQASLTAEDILN 248
Query: 265 SWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGW 324
SWPD EVGR+LREYGEESNW LQNKIV+ARL GGLHSTGELVDLI+ TP RG RQGW
Sbjct: 249 SWPDTEVGRILREYGEESNWRSLQNKIVKARLFGGLHSTGELVDLIRKTTPRTRGGRQGW 308
Query: 325 IKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSII 384
IKTATRVFQALRIAVNDELKTLE SL+ACF+CL PGGRL VISFHSLEDRIVKQTFL II
Sbjct: 309 IKTATRVFQALRIAVNDELKTLEDSLYACFECLTPGGRLAVISFHSLEDRIVKQTFLDII 368
Query: 385 DHN-------REDAEGNEEELRNIRDDNI-NETWIRQIIQGWNGKILTKRPITPSAEEER 436
+ N EG ++LRNIR+DN E WI+Q++QGWNG ILTKRPITPS EEER
Sbjct: 369 NSNGEDESGEGGGQEGCGKDLRNIRNDNDEKEAWIKQMVQGWNGTILTKRPITPSEEEER 428
Query: 437 LNCRCRSAKLRVIQK 451
LN R RSAKLRVIQK
Sbjct: 429 LNRRSRSAKLRVIQK 443
>gi|224082310|ref|XP_002306643.1| predicted protein [Populus trichocarpa]
gi|222856092|gb|EEE93639.1| predicted protein [Populus trichocarpa]
Length = 435
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 259/369 (70%), Positives = 298/369 (80%), Gaps = 11/369 (2%)
Query: 92 KEKRRTRSNKDYDYESIIQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAI 151
KEKRRTRS K+Y+ + +S H+PVMLGEV+DVFSS + SF+DCTLGAAGHSSAI
Sbjct: 69 KEKRRTRSEKEYEELHSFHETES-HVPVMLGEVVDVFSSL-PLRSFIDCTLGAAGHSSAI 126
Query: 152 IRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDE 211
I+ HPEL+ +IG+DVDP A AKARAH+++LL LK H KNF++IKSV+G+ID+
Sbjct: 127 IKGHPELECYIGMDVDPVAHAKARAHIDALLQS-TRSSLKPHLLFKNFKYIKSVVGEIDD 185
Query: 212 N--ILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDA 269
+ +L SGVD ILMDLGMSSMQVNNP+RGFSVL +GPLDMRMDP+AS+KA+DILN WPD
Sbjct: 186 DCKLLSSGVDGILMDLGMSSMQVNNPQRGFSVLANGPLDMRMDPRASVKAKDILNYWPDD 245
Query: 270 EVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTAT 329
EVGR+LREYGEESNW LQ KIVQAR +GGLHST EL DLIQ T G +G RQGWIKTAT
Sbjct: 246 EVGRILREYGEESNWRWLQKKIVQARQQGGLHSTSELRDLIQGATHGTKGGRQGWIKTAT 305
Query: 330 RVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNRE 389
RVFQALRIAVNDEL TLE SLHACF+CL PGGRL VISFHSLEDRIVKQTFL II+ N
Sbjct: 306 RVFQALRIAVNDELNTLEKSLHACFECLVPGGRLAVISFHSLEDRIVKQTFLKIIESNGG 365
Query: 390 DAEGNEEE-----LRNIRDD-NINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRS 443
D + EEE LR +R+D + ETWIRQ++QG NG ILTKRPITPS EEERLN R RS
Sbjct: 366 DGDVVEEEAGKRDLRKMRNDIDAKETWIRQMVQGQNGTILTKRPITPSEEEERLNRRSRS 425
Query: 444 AKLRVIQKI 452
AKLRVI+KI
Sbjct: 426 AKLRVIEKI 434
>gi|356541354|ref|XP_003539142.1| PREDICTED: ribosomal RNA small subunit methyltransferase H-like
[Glycine max]
Length = 418
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 263/396 (66%), Positives = 306/396 (77%), Gaps = 27/396 (6%)
Query: 69 SKNKKVAKAKATSARVGVGMGLVKEKRRTRSNKDYDYESIIQQ---------QQSSHIPV 119
+K++K K A +A L KEKRRTRS+K ++ ++II++ + SH+PV
Sbjct: 36 TKHQKNKKENAKAA-------LAKEKRRTRSDKQFNRDAIIERCRINDIDTDTKFSHVPV 88
Query: 120 MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLN 179
MLGEVLDVFS+S T+TSFVDCTLGAAGHS+A+IR HPELK +G+DVD A A+ L+
Sbjct: 89 MLGEVLDVFSNS-TLTSFVDCTLGAAGHSTAVIRGHPELKYLVGMDVDSLAHDIAQPRLD 147
Query: 180 SLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGF 239
++L+ +K T +NFR +KSVL +I E L GVDAILMDLGMSSMQV++P RGF
Sbjct: 148 AVLNA----GVKAITVLRNFRDVKSVLREIAELHL-LGVDAILMDLGMSSMQVDDPARGF 202
Query: 240 SVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGG 299
SVLGDGPLDMRMDPQASLKAEDILNSWPD+EVGR+LREYGEESNW LQ KIV ARL GG
Sbjct: 203 SVLGDGPLDMRMDPQASLKAEDILNSWPDSEVGRILREYGEESNWRTLQKKIVNARLYGG 262
Query: 300 LHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAP 359
LHST +L+DLI+ VTP M+G RQGWIKTATRVFQALRIAVNDELKTLE SL++CFDCLAP
Sbjct: 263 LHSTSDLLDLIRRVTPPMKGGRQGWIKTATRVFQALRIAVNDELKTLEDSLYSCFDCLAP 322
Query: 360 GGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE---EELRNIRDD-NINETWIRQII 415
GGRL VISFHSLEDRIVKQTFL+II RED E E LRN D+ E WI+Q+I
Sbjct: 323 GGRLAVISFHSLEDRIVKQTFLNII-KGREDVEERESLNSVLRNTSDEIKEKEAWIKQVI 381
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
G NG ILTKRPITPS EEE+LN R RSAKLRVIQK
Sbjct: 382 YGSNGTILTKRPITPSGEEEKLNRRSRSAKLRVIQK 417
>gi|356552558|ref|XP_003544633.1| PREDICTED: ribosomal RNA small subunit methyltransferase H-like
[Glycine max]
Length = 418
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 248/371 (66%), Positives = 293/371 (78%), Gaps = 19/371 (5%)
Query: 93 EKRRTRSNKDYDYESIIQQ---------QQSSHIPVMLGEVLDVFSSSRTITSFVDCTLG 143
EKRRTRS+K +++++II++ + SH+PVMLGEVLDVFSS+ +TSFVDCTLG
Sbjct: 54 EKRRTRSDKQFNHDAIIERCNINDTDTDTKFSHVPVMLGEVLDVFSST-FLTSFVDCTLG 112
Query: 144 AAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIK 203
AAGHS+A+I+ H ELK +G+DVD A A+ L+++L+G +K T +NFR +K
Sbjct: 113 AAGHSTAVIKGHQELKYFVGMDVDSVAHDIAQPRLDAVLNGG----VKAITVLRNFRDVK 168
Query: 204 SVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDIL 263
SVL + DE L+ GVD ILMDLG+SSMQV++P RGFSVLGDGPLDMRMDPQASLKAEDIL
Sbjct: 169 SVLREFDE--LKLGVDGILMDLGISSMQVDDPVRGFSVLGDGPLDMRMDPQASLKAEDIL 226
Query: 264 NSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQG 323
NSWPD+EVGR+LREYGEESNW LQ KIV ARL GGLHST +L+DLI+ V P MRG RQG
Sbjct: 227 NSWPDSEVGRILREYGEESNWRTLQKKIVNARLHGGLHSTSDLLDLIRRVAPPMRGGRQG 286
Query: 324 WIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSI 383
WIKTATRVFQALRIAVNDELKTLE SL+ CFDCLAPGGRL VISFHSLEDRIVKQTFL+I
Sbjct: 287 WIKTATRVFQALRIAVNDELKTLEDSLYYCFDCLAPGGRLAVISFHSLEDRIVKQTFLNI 346
Query: 384 IDHNR--EDAEGNEEELRNIRDD-NINETWIRQIIQGWNGKILTKRPITPSAEEERLNCR 440
I ++ E+ E +LR D+ E WI+Q+I G NG ILTKRPITPS EEE+LN R
Sbjct: 347 IKGSKDVEERESLNSDLRKTSDEIKEKEAWIKQVIYGSNGTILTKRPITPSGEEEKLNRR 406
Query: 441 CRSAKLRVIQK 451
RSAKLRVIQK
Sbjct: 407 SRSAKLRVIQK 417
>gi|449437088|ref|XP_004136324.1| PREDICTED: ribosomal RNA small subunit methyltransferase H-like
[Cucumis sativus]
gi|449505500|ref|XP_004162490.1| PREDICTED: ribosomal RNA small subunit methyltransferase H-like
[Cucumis sativus]
Length = 448
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 239/367 (65%), Positives = 288/367 (78%), Gaps = 11/367 (2%)
Query: 89 GLVKEKRRTRSNKDYDYESIIQQQQSSHIPVMLGEVLDVFSSS--RTITSFVDCTLGAAG 146
LVKEKRRTRS K++D +I ++HIPVML EVLDVF+SS R + SFVDCT+GA G
Sbjct: 84 ALVKEKRRTRSTKEFDENAIPIGDTAAHIPVMLAEVLDVFASSSGRPLRSFVDCTVGAGG 143
Query: 147 HSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVL 206
HSSAII+AHPEL ++G+DVDP AL KA+ ++ + LK + KNF+++KS+L
Sbjct: 144 HSSAIIQAHPELNFYMGMDVDPIALDKAQDRISDFFSEDSD--LKAYIVLKNFKYVKSLL 201
Query: 207 GQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSW 266
DE L GVD ++MDLGMSSMQV++PERGF VLGDGPLDMRMDPQASLKAEDILN+W
Sbjct: 202 ADSDEKPLDPGVDGMMMDLGMSSMQVDDPERGFRVLGDGPLDMRMDPQASLKAEDILNNW 261
Query: 267 PDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIK 326
P+ EVGR+LR YGEESNW+ LQNKIV+AR +GGLHST +L+DLI+ T G +G RQGWIK
Sbjct: 262 PETEVGRILRVYGEESNWYSLQNKIVKARSQGGLHSTTQLLDLIRKSTLGFKGGRQGWIK 321
Query: 327 TATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDH 386
TATRVFQALRIAVNDEL L++SL+ CFDCLAPGGRL VISFHSLEDR+VKQTFL II+
Sbjct: 322 TATRVFQALRIAVNDELNVLQNSLYTCFDCLAPGGRLAVISFHSLEDRVVKQTFLDIINP 381
Query: 387 NREDAEGNEE--ELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSA 444
EG+E+ E+ I ++ NE WI+Q ++G G +LTKRPITPS EEERLN R RSA
Sbjct: 382 K---TEGDEDGGEVTKIMEE--NEEWIKQTVKGLKGTVLTKRPITPSEEEERLNRRSRSA 436
Query: 445 KLRVIQK 451
KLRVIQK
Sbjct: 437 KLRVIQK 443
>gi|296081823|emb|CBI20828.3| unnamed protein product [Vitis vinifera]
Length = 324
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 242/344 (70%), Positives = 270/344 (78%), Gaps = 33/344 (9%)
Query: 114 SSHIPVMLGEVLDVFSSSRT------ITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVD 167
++H+PVMLGEVL+VFSS + + SFVDCTLGAAGHSSAII+AHPEL+L++G+DVD
Sbjct: 7 ATHVPVMLGEVLEVFSSFSSSSSSSPLRSFVDCTLGAAGHSSAIIQAHPELELYVGMDVD 66
Query: 168 PSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGM 227
P A KA+A + SL +H LK HTF +NF++IKSVL ++DE +L SGVD ILMDLGM
Sbjct: 67 PIAHEKAQARIRSLCGDSSH--LKAHTFMRNFKNIKSVLREVDEELLSSGVDGILMDLGM 124
Query: 228 SSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLL 287
SSMQVNN ERGFSVL +GPLDMRMDPQASL AEDILNSWPD EVGR+LREYGEESNW L
Sbjct: 125 SSMQVNNAERGFSVLANGPLDMRMDPQASLTAEDILNSWPDTEVGRILREYGEESNWRSL 184
Query: 288 QNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLE 347
QNKIV+ARL GGLHSTGELVDLI+ TP RG RQGWIKTATRVFQALRIAVNDELKTLE
Sbjct: 185 QNKIVKARLFGGLHSTGELVDLIRKTTPRTRGGRQGWIKTATRVFQALRIAVNDELKTLE 244
Query: 348 SSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNIN 407
SL+ACF+CL PGGRL VISFHSLEDRIVKQTFL II+ N ED
Sbjct: 245 DSLYACFECLTPGGRLAVISFHSLEDRIVKQTFLDIINSNGED----------------- 287
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ WNG ILTKRPITPS EEERLN R RSAKLRVIQK
Sbjct: 288 --------ERWNGTILTKRPITPSEEEERLNRRSRSAKLRVIQK 323
>gi|297807119|ref|XP_002871443.1| mraW methylase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297317280|gb|EFH47702.1| mraW methylase family protein [Arabidopsis lyrata subsp. lyrata]
Length = 434
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 245/384 (63%), Positives = 294/384 (76%), Gaps = 19/384 (4%)
Query: 77 AKATSARVGVGMGLVKEKRRTRSNKDYDYESIIQQQQSSHIPVMLGEVLDVFSSSRTITS 136
AKAT+ V + KEKRRTRS+++Y+ + SSH+PVMLGEVLD+FSS R + S
Sbjct: 62 AKATAEAV-----VNKEKRRTRSSREYEIADG-DEVPSSHVPVMLGEVLDIFSSVR-LRS 114
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
FVDCTLGAAGHSS+II++H ELK +G+DVDP A H++SL+H P LK
Sbjct: 115 FVDCTLGAAGHSSSIIQSHSELKHFVGMDVDPVARKLGHFHIDSLMH----PTLKASIVL 170
Query: 197 KNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQAS 256
KNF++IKSV+ +L GVD ILMDLGMSSMQVNNP+RGFSVL +GPLDMRMDPQA+
Sbjct: 171 KNFKYIKSVVADTQPELLDVGVDGILMDLGMSSMQVNNPQRGFSVLQEGPLDMRMDPQAT 230
Query: 257 LKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPG 316
L AEDI+NSWP++E+GRVLR+YGEESNWHLLQ +IV+ARL GGLHSTGELVDLI+ ++P
Sbjct: 231 LTAEDIVNSWPESELGRVLRDYGEESNWHLLQTRIVKARLNGGLHSTGELVDLIRGMSPA 290
Query: 317 MRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIV 376
RG RQGWIKTATRVFQ LRIAVNDELKTL++SL++ FD L PGGRL VISFHSLEDR+V
Sbjct: 291 GRGGRQGWIKTATRVFQGLRIAVNDELKTLQNSLYSSFDVLGPGGRLAVISFHSLEDRVV 350
Query: 377 KQTFLSIIDHNRED--AEGN------EEELRNIRDDNINETWIRQIIQGWNGKILTKRPI 428
KQTFL+I+ RE+ EGN + E R ++ E WI+Q + G G ILTKRPI
Sbjct: 351 KQTFLNILGFQREEINGEGNSVKPERQIEERVEKELKEKEAWIKQTVIGSKGVILTKRPI 410
Query: 429 TPSAEEERLNCRCRSAKLRVIQKI 452
TPS EEERLN R RSAKLRVIQK+
Sbjct: 411 TPSEEEERLNRRARSAKLRVIQKL 434
>gi|15238896|ref|NP_196652.1| mraW methylase family protein [Arabidopsis thaliana]
gi|8979725|emb|CAB96846.1| putative protein [Arabidopsis thaliana]
gi|16604434|gb|AAL24223.1| AT5g10910/T30N20_180 [Arabidopsis thaliana]
gi|28416479|gb|AAO42770.1| At5g10910/T30N20_180 [Arabidopsis thaliana]
gi|332004225|gb|AED91608.1| mraW methylase family protein [Arabidopsis thaliana]
Length = 434
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 238/369 (64%), Positives = 281/369 (76%), Gaps = 14/369 (3%)
Query: 92 KEKRRTRSNKDYDYESIIQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAI 151
KEKRRTRS++ Y+ + SSH+PVMLGEVLD+FSS R + SFVDCTLGAAGHSS+I
Sbjct: 72 KEKRRTRSSRGYELADG-DEVPSSHVPVMLGEVLDIFSSVR-LRSFVDCTLGAAGHSSSI 129
Query: 152 IRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDE 211
I++H ELK +G+DVDP A H++SL+H P LK KNF++IKSV+
Sbjct: 130 IQSHSELKNFVGMDVDPVARKLGHFHIDSLMH----PTLKASIVLKNFKYIKSVIADTQP 185
Query: 212 NILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEV 271
+L GVD ILMDLGMSSMQVNNPERGFSVL +GPLDMRMDPQA+L AEDI+NSWP++E+
Sbjct: 186 ELLDVGVDGILMDLGMSSMQVNNPERGFSVLQEGPLDMRMDPQATLTAEDIVNSWPESEL 245
Query: 272 GRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRV 331
GRVLR+YGEESNW+LLQN+IV+ARL GGLHSTGELVDLI+ +P RG RQGWIKTATRV
Sbjct: 246 GRVLRDYGEESNWYLLQNRIVKARLNGGLHSTGELVDLIRGTSPASRGGRQGWIKTATRV 305
Query: 332 FQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDA 391
FQ LRIAVNDELKTL++SL++ FD LAPGGRL VISFHSLEDR+VKQTFL I+ RE+
Sbjct: 306 FQGLRIAVNDELKTLQNSLYSSFDVLAPGGRLAVISFHSLEDRVVKQTFLDILGFQREEI 365
Query: 392 EGNEEELRNIRD--------DNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRS 443
G ++ R E WI+Q + G ILTKRPITPS EEERLN R RS
Sbjct: 366 NGEGSSVKPERQIEERVEKELKEKEEWIKQTVIASKGVILTKRPITPSEEEERLNRRARS 425
Query: 444 AKLRVIQKI 452
AKLRVIQK+
Sbjct: 426 AKLRVIQKL 434
>gi|115444103|ref|NP_001045831.1| Os02g0137600 [Oryza sativa Japonica Group]
gi|42409129|dbj|BAD10379.1| putative methyltransferase [Oryza sativa Japonica Group]
gi|42409260|dbj|BAD10523.1| putative methyltransferase [Oryza sativa Japonica Group]
gi|113535362|dbj|BAF07745.1| Os02g0137600 [Oryza sativa Japonica Group]
gi|125538002|gb|EAY84397.1| hypothetical protein OsI_05773 [Oryza sativa Indica Group]
Length = 436
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 233/369 (63%), Positives = 278/369 (75%), Gaps = 14/369 (3%)
Query: 94 KRRTRSNKDYDYESIIQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIR 153
KRRTRS +D + + H+PVMLGEVL F + SFVDCTLGAAGHS A++
Sbjct: 70 KRRTRSGAAFDAGLYRRHSHAEHVPVMLGEVLAAFRRPLPLRSFVDCTLGAAGHSLAMME 129
Query: 154 AHPELKLHIGVDVDPSALAKARAHLNSLLHGQ---------AHPHLKTHTFAKNFRHIKS 204
AHPE++L+IG+DVDPSAL R+ + + L + + L+ +T AKNF++IK
Sbjct: 130 AHPEMELYIGMDVDPSALEIGRSRIEAFLANRETNGDDEDASQGTLRAYTHAKNFKYIKH 189
Query: 205 VLGQIDENIL--RSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDI 262
VLG +DENI SGVD IL+DLGMSSMQVN +RGFSVL DGPLDMRMDP+A+LKAEDI
Sbjct: 190 VLGSVDENIAVGTSGVDGILIDLGMSSMQVNRSDRGFSVLQDGPLDMRMDPKATLKAEDI 249
Query: 263 LNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQ 322
LNSWPD EVGR+LR+YGEESNW LQ +IV+AR GGLHSTGELV LIQ T G RQ
Sbjct: 250 LNSWPDLEVGRILRDYGEESNWQSLQKRIVKARAMGGLHSTGELVKLIQR-TCTSSGGRQ 308
Query: 323 GWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLS 382
GWIKTATRVFQALRIAVNDEL+TLE +LHACFDCLA GRL VISFHSLEDRIVKQTFL
Sbjct: 309 GWIKTATRVFQALRIAVNDELRTLEDALHACFDCLATDGRLAVISFHSLEDRIVKQTFLE 368
Query: 383 IIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCR 442
+I + ++ + +E++L + D+ +E W +Q +QG NG ILTKRPI+PS EEE LN RCR
Sbjct: 369 LI--HEDEIDDDEDDLVSADIDSEDEPWFKQRVQGKNGTILTKRPISPSQEEEELNQRCR 426
Query: 443 SAKLRVIQK 451
SAKLRVIQK
Sbjct: 427 SAKLRVIQK 435
>gi|242060440|ref|XP_002451509.1| hypothetical protein SORBIDRAFT_04g003030 [Sorghum bicolor]
gi|241931340|gb|EES04485.1| hypothetical protein SORBIDRAFT_04g003030 [Sorghum bicolor]
Length = 445
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/372 (61%), Positives = 275/372 (73%), Gaps = 15/372 (4%)
Query: 94 KRRTRSNKDYDYESIIQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIR 153
KRRTRS +D + ++ H+PV+LGEVL F R + SFVDCTLGAAGHS A++
Sbjct: 74 KRRTRSAASFDADLYGRRAHEHHVPVLLGEVLAAFRRPRPLRSFVDCTLGAAGHSLAMME 133
Query: 154 AHPELKLHIGVDVDPSALAKARAHLNSLLHGQA-----------HPHLKTHTFAKNFRHI 202
AHPEL+L+IG+DVDPSAL R H+ + L G+ L+ +T KNF++I
Sbjct: 134 AHPELELYIGMDVDPSALEIGRGHIETFLAGREREANGREEDVLQETLRAYTHVKNFKYI 193
Query: 203 KSVLGQIDENIL--RSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAE 260
K VLG +DE++ SGVD IL+DLGMSSMQVN RGFSVL DGPLDMRMDP+A+L+AE
Sbjct: 194 KQVLGSVDESLAVGSSGVDGILIDLGMSSMQVNRSNRGFSVLQDGPLDMRMDPKATLRAE 253
Query: 261 DILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGR 320
DILNSWP+ E+GR+LREYGEESNW +Q +IV+AR GGLHSTG+LV LIQ + G
Sbjct: 254 DILNSWPEIELGRILREYGEESNWQSVQKQIVKARATGGLHSTGDLVKLIQRMCSISSG- 312
Query: 321 RQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTF 380
RQGWIKTATRVFQALRIAVNDEL+ LE SLH+CFDCLA GGRL VISFHSLEDRIVK+TF
Sbjct: 313 RQGWIKTATRVFQALRIAVNDELRVLEDSLHSCFDCLATGGRLAVISFHSLEDRIVKKTF 372
Query: 381 LSIIDHNREDAEGNEEELRNIRD-DNINETWIRQIIQGWNGKILTKRPITPSAEEERLNC 439
L +I D E ++++ + D N +E W Q +QG NG +LTKRPITPS EEE+LN
Sbjct: 373 LELIHGGEADDEEDDKDDLALTDIVNEDEPWFGQRVQGRNGTVLTKRPITPSQEEEKLNQ 432
Query: 440 RCRSAKLRVIQK 451
RCRSAKLRVIQK
Sbjct: 433 RCRSAKLRVIQK 444
>gi|224029029|gb|ACN33590.1| unknown [Zea mays]
gi|413935528|gb|AFW70079.1| hypothetical protein ZEAMMB73_571267 [Zea mays]
Length = 436
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/374 (60%), Positives = 277/374 (74%), Gaps = 20/374 (5%)
Query: 94 KRRTRSNKDYDYESIIQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIR 153
KRRTRS +D + ++ HIPV+LGEVL F R + SFVDCTLGAAGHS A++
Sbjct: 66 KRRTRSAAAFDADLYGRRAHEHHIPVLLGEVLAAFRRPRPLRSFVDCTLGAAGHSLAMME 125
Query: 154 AHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPH-----------LKTHTFAKNFRHI 202
AHPEL+L+IG+DVDPSAL H+ + L G+ L+ +T KNF++I
Sbjct: 126 AHPELELYIGMDVDPSALGIGHGHIEAFLAGREREANGGEDDALLGTLRAYTHVKNFKYI 185
Query: 203 KSVLGQIDENIL--RSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAE 260
K VL +DE+++ SGVD IL+DLGMSSMQVN RGFSVL DGPLDMRMDP+A+L+AE
Sbjct: 186 KQVLSSVDESLVVGSSGVDGILIDLGMSSMQVNKSNRGFSVLQDGPLDMRMDPKATLRAE 245
Query: 261 DILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGR 320
DILNSWP+ E+GR+LREYGEESNW +Q +IV+AR GGLHSTG+LV LIQ + GR
Sbjct: 246 DILNSWPELELGRILREYGEESNWQSVQKQIVKARSVGGLHSTGDLVKLIQRMCTISSGR 305
Query: 321 RQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTF 380
QGWIKT+TRVFQALRIAVNDEL+ LE SLH+CFDCLA GGRL VISFHSLEDRIVK+TF
Sbjct: 306 -QGWIKTSTRVFQALRIAVNDELRVLEDSLHSCFDCLATGGRLAVISFHSLEDRIVKKTF 364
Query: 381 LSII---DHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEERL 437
L +I + N ED + +++ L +I D +E W Q +QG NG +LTKRPITPS EEE+L
Sbjct: 365 LELIHGGEANEED-DKDDQALTDIEDG--DEPWSGQRVQGRNGTVLTKRPITPSQEEEKL 421
Query: 438 NCRCRSAKLRVIQK 451
N RCRSAKLRVIQK
Sbjct: 422 NQRCRSAKLRVIQK 435
>gi|357147412|ref|XP_003574334.1| PREDICTED: ribosomal RNA small subunit methyltransferase H-like
[Brachypodium distachyon]
Length = 428
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 237/414 (57%), Positives = 288/414 (69%), Gaps = 15/414 (3%)
Query: 47 PNPNPWAGVAVFTTFPFRAANDSKNKKVAKAKATSARVGVGMGLVKEKRRTRSNKDYDYE 106
P+ V+ +T R +K K K R + L KRRTRS +D +
Sbjct: 20 PHRRKHDAVSCKSTGKARTGTSTKPKDSGAGKWRPQRRALEEHL---KRRTRSAGAFDAD 76
Query: 107 SIIQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDV 166
+ S H+PV+LGEVL F + SFVDCTLGAAGHS A++ AHPE++LHIG+DV
Sbjct: 77 LYRRHSHSHHVPVLLGEVLAAFRRPLPLRSFVDCTLGAAGHSLAMMEAHPEMELHIGMDV 136
Query: 167 DPSALAKARAHLNSLLHGQA-------HPHLKTHTFAKNFRHIKSVLGQIDENIL--RSG 217
DPSAL + H+ + L +A L+ +T KNF++IK VLG +DE++L SG
Sbjct: 137 DPSALEIGQRHVEAFLASRATDGGDSLQGVLRAYTHVKNFKYIKHVLGGVDESLLADSSG 196
Query: 218 VDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLRE 277
VD IL+DLGMSSMQVN +RGFSVL DGPLDMRMDP+A+L AEDILNSWP+ EVGR+LR+
Sbjct: 197 VDGILIDLGMSSMQVNRSDRGFSVLHDGPLDMRMDPKATLTAEDILNSWPELEVGRILRD 256
Query: 278 YGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRI 337
YGEESNW LQ +IV+AR GGLHSTGELV LIQ + + G RQGWIKTATRVFQALRI
Sbjct: 257 YGEESNWQSLQRRIVKARQAGGLHSTGELVKLIQR-SCTISGGRQGWIKTATRVFQALRI 315
Query: 338 AVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEE 397
AVNDEL+ LE +LH+CFDCLA GRL VISFHSLEDRIVKQTFL +I + D +
Sbjct: 316 AVNDELRILEDTLHSCFDCLATDGRLAVISFHSLEDRIVKQTFLELIHGDGVDDGDEDLV 375
Query: 398 LRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+I D+ +E W +Q ++G NG ILTKRPITPS EEE+LN RCRSAKLRVIQK
Sbjct: 376 CTDIDDE--DEPWFKQRVKGMNGIILTKRPITPSQEEEKLNQRCRSAKLRVIQK 427
>gi|356563794|ref|XP_003550144.1| PREDICTED: ribosomal RNA small subunit methyltransferase H-like
[Glycine max]
Length = 315
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 215/317 (67%), Positives = 242/317 (76%), Gaps = 22/317 (6%)
Query: 151 IIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQID 210
+IR HPELK +G+DVD A A+ L+++L+ +K T +NFR +KSVL +I
Sbjct: 4 VIRGHPELKYLVGMDVDSLAHDIAQPRLDAVLNA----GVKAITVLRNFRDVKSVLREIA 59
Query: 211 ENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAE 270
E L GVDAILMDLGMSSMQV++P RGFSVLGDGPLDMRMDPQASLKAEDILNSWPD+E
Sbjct: 60 ELHL-LGVDAILMDLGMSSMQVDDPARGFSVLGDGPLDMRMDPQASLKAEDILNSWPDSE 118
Query: 271 VGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATR 330
VGR+LREYGEESNW LQ KIV ARL GGL ST +L+DLI+ VTP M+G RQGWIK ATR
Sbjct: 119 VGRILREYGEESNWRTLQKKIVNARLHGGLQSTSDLLDLIRRVTPPMKGGRQGWIKMATR 178
Query: 331 VFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNRED 390
VFQALRIAVNDELKTLE SL++CFDCLAPGGRL VISFHSLEDRIVKQTFL+II RED
Sbjct: 179 VFQALRIAVNDELKTLEDSLYSCFDCLAPGGRLAVISFHSLEDRIVKQTFLNII-KGRED 237
Query: 391 AEGNE--------EE-------LRNIRDD-NINETWIRQIIQGWNGKILTKRPITPSAEE 434
E E EE LRN D+ E WI+Q+I G NG ILTKRPITPS EE
Sbjct: 238 VEERESLNRREDVEERESLNSVLRNTSDEIKEKEAWIKQVIYGSNGTILTKRPITPSGEE 297
Query: 435 ERLNCRCRSAKLRVIQK 451
E+LN R RSAKLRVIQK
Sbjct: 298 EKLNRRSRSAKLRVIQK 314
>gi|125580743|gb|EAZ21674.1| hypothetical protein OsJ_05305 [Oryza sativa Japonica Group]
Length = 439
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/372 (58%), Positives = 264/372 (70%), Gaps = 17/372 (4%)
Query: 94 KRRTRSNKDYDYESIIQQQQSSHIPVMLGEVLDVFSS--SRTITSFVDCTLGAAGHS-SA 150
KRRTRS +D + + H P S+ SR+ S + A S S
Sbjct: 70 KRRTRSGAAFDAGLYRRHSHAEHGPRHARRGPRRRSAALSRSAPSSTAPSARPATRSPSV 129
Query: 151 IIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQ---------AHPHLKTHTFAKNFRH 201
++ AHPE++L+IG+DVDPSAL R+ + + L + + L+ +T AKNF++
Sbjct: 130 MMEAHPEMELYIGMDVDPSALEIGRSRIEAFLANRETNGDDEDASQGTLRAYTHAKNFKY 189
Query: 202 IKSVLGQIDENIL--RSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKA 259
IK VLG +DENI SGVD IL+DLGMSSMQVN +RGFSVL DGPLDMRMDP+A+LKA
Sbjct: 190 IKHVLGSVDENIAVGTSGVDGILIDLGMSSMQVNRSDRGFSVLQDGPLDMRMDPKATLKA 249
Query: 260 EDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRG 319
EDILNSWPD EVGR+LR+YGEESNW LQ +IV+AR GGLHSTGELV LIQ T G
Sbjct: 250 EDILNSWPDLEVGRILRDYGEESNWQSLQKRIVKARAMGGLHSTGELVKLIQR-TCTSSG 308
Query: 320 RRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQT 379
RQGWIKTATRVFQALRIAVNDEL+TLE +LHACFDCLA GRL VISFHSLEDRIVKQT
Sbjct: 309 GRQGWIKTATRVFQALRIAVNDELRTLEDALHACFDCLATDGRLAVISFHSLEDRIVKQT 368
Query: 380 FLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNC 439
FL +I + ++ + +E++L + D+ +E W +Q +QG NG ILTKRPI+PS EEE LN
Sbjct: 369 FLELI--HEDEIDDDEDDLVSADIDSEDEPWFKQRVQGKNGTILTKRPISPSQEEEELNQ 426
Query: 440 RCRSAKLRVIQK 451
RCRSAKLRVIQK
Sbjct: 427 RCRSAKLRVIQK 438
>gi|326518102|dbj|BAK07303.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 272
Score = 345 bits (884), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 178/264 (67%), Positives = 209/264 (79%), Gaps = 5/264 (1%)
Query: 190 LKTHTFAKNFRHIKSVLGQIDENIL--RSGVDAILMDLGMSSMQVNNPERGFSVLGDGPL 247
L+ +T KNF++IK VLG +DE++ GVD IL+DLGMSSMQVN +RGFSVL DGPL
Sbjct: 11 LRAYTHVKNFKYIKHVLGGVDESLADGSCGVDGILIDLGMSSMQVNRSDRGFSVLNDGPL 70
Query: 248 DMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELV 307
DMRMDP+A+L AEDILNSWP+ EVGR+LR+YGEESNW LQ +IV+ R GGLHSTGELV
Sbjct: 71 DMRMDPRATLTAEDILNSWPELEVGRILRDYGEESNWQSLQRRIVKERKTGGLHSTGELV 130
Query: 308 DLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVIS 367
LIQ T + G RQGWIKTATRVFQALRIAVNDEL+TLE +LH+CFDCLA GRL VIS
Sbjct: 131 KLIQR-TCTISGGRQGWIKTATRVFQALRIAVNDELRTLEDALHSCFDCLATDGRLAVIS 189
Query: 368 FHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRP 427
FHSLEDRIVKQTFL +I D + ++ +I D+ +E W +Q +QG NG +LTKRP
Sbjct: 190 FHSLEDRIVKQTFLELIHGGEADGDDDDLAYADIDDE--DEPWFKQRVQGTNGTVLTKRP 247
Query: 428 ITPSAEEERLNCRCRSAKLRVIQK 451
ITPS EEE+LN RCRSAKLRVIQK
Sbjct: 248 ITPSQEEEKLNQRCRSAKLRVIQK 271
>gi|168023286|ref|XP_001764169.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684609|gb|EDQ71010.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 329
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 184/343 (53%), Positives = 226/343 (65%), Gaps = 19/343 (5%)
Query: 114 SSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAK 173
+ H+ V+L EVL F R I SFVDCTLGAAGH+SAI+R HPEL+ IG DVDP A ++
Sbjct: 1 APHVAVLLNEVLAKFRDRR-ILSFVDCTLGAAGHASAILREHPELESFIGFDVDPVAHSE 59
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
A+ L ++ A ++ H NFR+IK + D ++ GV+ ILMDLGMSSMQV+
Sbjct: 60 AKPRLQAM----ASSDVQLHLVLTNFRNIKKAVNGADAKLVHEGVNGILMDLGMSSMQVD 115
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
ERGFS + DGP DMRMDP ASL AE+ILN WP+AEV R+LR+YGEE W L KIV
Sbjct: 116 MAERGFSFMKDGPADMRMDPSASLTAEEILNKWPEAEVARILRDYGEEKRWKHLARKIVD 175
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
RL GG+HST ELV +I T G G+ + + ATR FQALRIAVNDEL+TLE++L
Sbjct: 176 KRLAGGIHSTSELVKVIGGNTFGRPGKGKA-VHPATRTFQALRIAVNDELRTLETALADA 234
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSI--IDHNREDAEGNEE---ELRNIRDDNINE 408
FD LAP GRL VISFHSLEDRIVK+ FL I ED E E + ++RD N
Sbjct: 235 FDLLAPKGRLAVISFHSLEDRIVKRFFLKAAGIGQAVEDNEMGSEPQGDDFSLRDKN--- 291
Query: 409 TWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+++G G +LTKRPI A+E N R RSAKLRVI+K
Sbjct: 292 -----VLEGSIGVVLTKRPIVAEADEINTNPRSRSAKLRVIEK 329
>gi|302770288|ref|XP_002968563.1| hypothetical protein SELMODRAFT_89216 [Selaginella moellendorffii]
gi|300164207|gb|EFJ30817.1| hypothetical protein SELMODRAFT_89216 [Selaginella moellendorffii]
Length = 373
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 157/345 (45%), Positives = 210/345 (60%), Gaps = 35/345 (10%)
Query: 110 QQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPS 169
++++ H PV++ + L+ F R++ +F+DCT+GA GH+ II+AHPEL+ +G+DVDP
Sbjct: 60 EKKRLPHTPVLVRQFLEHFEG-RSVKTFLDCTVGAGGHAFEIIQAHPELETFVGMDVDPC 118
Query: 170 ALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSS 229
AL AR L+ L A K F NF+++K L + + +L G D IL+DLG+SS
Sbjct: 119 ALKLARQRLSDLSGSMA----KVDLFHANFKNMKKDLKERNPELLERGFDGILLDLGLSS 174
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQ--ASLKAEDILNSWPDAEVGRVLREYGEESNWHLL 287
MQV+ PERGFS DGPLDMRMD L AE I N+W AE+GR+LREYGEE W L
Sbjct: 175 MQVDAPERGFSYYLDGPLDMRMDSSDVLGLTAEAICNNWSAAEIGRILREYGEEMRWKFL 234
Query: 288 QNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLE 347
++IV ARL GG+ +T +L ++ R +R A R FQALRIAVNDELK+L
Sbjct: 235 ASRIVDARLNGGIKTTKDLASVVGGRFTSGRFKRAR--HPAARTFQALRIAVNDELKSLR 292
Query: 348 SSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNIN 407
S++ CLAPGGRL VISFHSLEDRIVK F +EL ++ D ++
Sbjct: 293 SAIGQASSCLAPGGRLAVISFHSLEDRIVKYQF---------------KEL-SLVFDKVD 336
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++ +LT PIT A E N RCRSAK+RVIQ++
Sbjct: 337 LAFM----------LLTTSPITADAAEIEKNSRCRSAKMRVIQRL 371
>gi|302788300|ref|XP_002975919.1| hypothetical protein SELMODRAFT_175313 [Selaginella moellendorffii]
gi|300156195|gb|EFJ22824.1| hypothetical protein SELMODRAFT_175313 [Selaginella moellendorffii]
Length = 373
Score = 274 bits (700), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 157/345 (45%), Positives = 209/345 (60%), Gaps = 35/345 (10%)
Query: 110 QQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPS 169
++++ H PV++ + L+ F R++ +F+DCT+GA GH+ II+AHPEL+ +G+DVDP
Sbjct: 60 EKKRLPHTPVLVRQFLEHFEG-RSVKTFLDCTVGAGGHAFEIIQAHPELETFVGMDVDPC 118
Query: 170 ALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSS 229
AL AR L+ L A K F NF+++K L + + +L G D IL+DLG+SS
Sbjct: 119 ALKLARQRLSDLSGSMA----KVDLFHANFKNMKKDLKERNPELLERGFDGILLDLGLSS 174
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQ--ASLKAEDILNSWPDAEVGRVLREYGEESNWHLL 287
MQV+ PERGFS DGPLDMRMD L AE I N+W AE+GR+LREYGEE W L
Sbjct: 175 MQVDAPERGFSYYLDGPLDMRMDSSDVLGLTAEAICNNWSAAEIGRILREYGEEMRWKFL 234
Query: 288 QNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLE 347
++IV ARL GG+ +T +L ++ R +R A R FQALRIAVNDELK+L
Sbjct: 235 ASRIVDARLNGGIKTTKDLASVVGGRFTSGRFKRAR--HPAARTFQALRIAVNDELKSLR 292
Query: 348 SSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNIN 407
S++ CLAPGGRL VISFHSLEDRIVK F +EL ++ D +
Sbjct: 293 SAIGHASSCLAPGGRLAVISFHSLEDRIVKYQF---------------KEL-SLVFDKAD 336
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++ +LT PIT A E N RCRSAK+RVIQ++
Sbjct: 337 LAFM----------LLTTSPITADAAEIEKNSRCRSAKMRVIQRL 371
>gi|255082159|ref|XP_002508298.1| predicted protein [Micromonas sp. RCC299]
gi|226523574|gb|ACO69556.1| predicted protein [Micromonas sp. RCC299]
Length = 363
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 141/339 (41%), Positives = 200/339 (58%), Gaps = 40/339 (11%)
Query: 114 SSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAK 173
+ H+PV++ +VLD F R++ +VD T+GA GH+SAIIRAHPEL+ +G D
Sbjct: 65 APHVPVLMRQVLDAFDG-RSLRCYVDGTMGAGGHASAIIRAHPELRTFVGFD-------- 115
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
L+ HT NFRH++ L ++ + GVDAILMDLG+SSM ++
Sbjct: 116 ----------------LRIHTVQSNFRHMRERLAEL--QLADGGVDAILMDLGVSSMHLD 157
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
PERGFS + DGPLDMRM P A + A D++N WP+ E+ RV+R+YGEE +W LL +I
Sbjct: 158 TPERGFSFMNDGPLDMRMGPSAKMSAADVVNEWPEEEIARVIRDYGEEKHWRLLARRICD 217
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +T +LV + + PG++ R G I ATR FQ +RIAVN+EL +E ++ A
Sbjct: 218 ARGIAPIETTRQLVHALGRI-PGVKKGRSGGIHPATRTFQGIRIAVNEELAVVEEAIPAA 276
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
D LAPGGRL +I+FHSLED++VK+ F R A R + +
Sbjct: 277 VDALAPGGRLAIITFHSLEDKLVKRAF-------RTFAGIAPASDRPLSAWEPQPEAPPK 329
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
I+ K++T++P+ +E N R RSAKLRV +K+
Sbjct: 330 IV-----KLVTRKPVVADDDEVGANARSRSAKLRVCEKL 363
>gi|308807246|ref|XP_003080934.1| MRAW_PARUW S-adenosyl-methyltransferase mraW ref|YP_007310.1|
probable S-ade (ISS) [Ostreococcus tauri]
gi|116059395|emb|CAL55102.1| MRAW_PARUW S-adenosyl-methyltransferase mraW ref|YP_007310.1|
probable S-ade (ISS) [Ostreococcus tauri]
Length = 370
Score = 253 bits (647), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 149/346 (43%), Positives = 200/346 (57%), Gaps = 30/346 (8%)
Query: 114 SSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAK 173
+ H VM+ E+L F + + VD TLGA GH+ A+IR HPE++ IG DVD SA A
Sbjct: 48 APHYSVMMDEILSAFRDV-ELRAHVDGTLGAGGHAQAMIRTHPEMEHFIGFDVDASAHAI 106
Query: 174 ARAHLNSL---LHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSM 230
AR L G LK NFR + L + I R+G+D +++DLG+SSM
Sbjct: 107 ARPRLERAREDARGGEAGALKVSLVEANFRQMAQALEAMG-GIHRAGIDGVVLDLGVSSM 165
Query: 231 QVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNK 290
++ ERGFS + DGPLDMRM P A AE+I+N+WP+ E+GR+LR+YGEE +W LL +
Sbjct: 166 HLDRAERGFSFMNDGPLDMRMGPSAKTSAEEIVNAWPEEEIGRILRDYGEERHWRLLAKR 225
Query: 291 IVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSL 350
I + R + +T ELVD + +V PG + G I ATR FQ +RIAVNDEL +E +
Sbjct: 226 ICERRAAKAITTTRELVDALGNV-PG----KWGSIHPATRTFQGIRIAVNDELGAVEDVI 280
Query: 351 HACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETW 410
A + L PGGRL +ISFHSLED IVK+ F G E L ET+
Sbjct: 281 PAAIEALRPGGRLAIISFHSLEDSIVKKKFRFYA--------GQAEPL--------GETF 324
Query: 411 IRQIIQGWNG----KILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
R + Q K++T++P+ PS +E N R RSAKLRV +K+
Sbjct: 325 NRYMDQPEKPPKVVKLITRKPLVPSVDEVDENVRSRSAKLRVCEKL 370
>gi|302849292|ref|XP_002956176.1| hypothetical protein VOLCADRAFT_97159 [Volvox carteri f.
nagariensis]
gi|300258479|gb|EFJ42715.1| hypothetical protein VOLCADRAFT_97159 [Volvox carteri f.
nagariensis]
Length = 305
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 142/336 (42%), Positives = 195/336 (58%), Gaps = 38/336 (11%)
Query: 120 MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLN 179
ML EVLD F T+ ++DCTLGA GH++ I AHPE+++ +G+D+DP+A A +
Sbjct: 1 MLNEVLDAFQPV-TLNVYLDCTLGAGGHAAKIASAHPEMQMLLGIDLDPTAHVVAEPRIR 59
Query: 180 SLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGF 239
+ G++ L N+R +K +L + R + ILMDLG+SSMQ++ +RGF
Sbjct: 60 AEAAGRSA-RLDVRLLRGNYRDLKRLLATVSTPSPRP--NGILMDLGISSMQIDTADRGF 116
Query: 240 SVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGG 299
S + DGPLDMRMDP A+L AE++LN+W +AE+GR++R++GEE W ++ +IVQAR
Sbjct: 117 SFMRDGPLDMRMDPTAALSAEEVLNTWSEAELGRIIRDFGEEKLWKVVARRIVQAREVAP 176
Query: 300 LHSTGELVDLI---QSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDC 356
+ +T +LV + Q V R I ATR FQALRIAVNDEL+ LE +L D
Sbjct: 177 IRTTQQLVKAVGQTQLVGKSPRKASAKGIHPATRTFQALRIAVNDELQKLEKTLPDAIDA 236
Query: 357 LAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQ 416
LAPGGRL VISFHSLEDRIVK F+ R EE ++
Sbjct: 237 LAPGGRLAVISFHSLEDRIVKHAFM------RAAGRPTPEE--------------ENLVY 276
Query: 417 GWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
G + +A E N R RSAKLR++QK+
Sbjct: 277 GQD-----------NALETEANARARSAKLRILQKL 301
>gi|145350048|ref|XP_001419435.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579666|gb|ABO97728.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 314
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 145/336 (43%), Positives = 198/336 (58%), Gaps = 26/336 (7%)
Query: 121 LGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLN- 179
+ EVL+ F R T VD TLGA GH+ A+I AH E++ +G DVD SA A AR L
Sbjct: 1 MDEVLEAFRDVRART-HVDGTLGAGGHARAMIEAHEEMEHFVGFDVDASAHALARPRLER 59
Query: 180 ---SLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPE 236
+ +A L+ NFR ++ L +D + GVD++++DLG+SSM ++ E
Sbjct: 60 ARAATRGDEATTTLRLSLVEANFRRMREALRALDVD----GVDSVVLDLGVSSMHLDRAE 115
Query: 237 RGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARL 296
RGFS + DGPLDMRM A+ AE+I+N+WP+ E+GR+LREYGEE +W LL +I + R
Sbjct: 116 RGFSFMNDGPLDMRMGESATTTAEEIVNAWPEEEIGRILREYGEEKHWRLLARRICERRA 175
Query: 297 RGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDC 356
+ +T ELVD I +V PG + G I ATR FQ +RIAVNDEL +E + A +
Sbjct: 176 EKEIRTTRELVDAIGNV-PG----KWGSIHPATRTFQGIRIAVNDELGAVEDVIPAAIEA 230
Query: 357 LAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQ 416
L PGGRL +ISFHSLED IVK+ F H AE EE +N +
Sbjct: 231 LRPGGRLAIISFHSLEDSIVKRRF----RHFAGRAEPPSEE--------VNRYMPQPEAP 278
Query: 417 GWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
K++T++P P++ E +N R RSAKLRV +K+
Sbjct: 279 PKIVKLITRKPKVPTSAEIDVNVRSRSAKLRVCEKL 314
>gi|303279384|ref|XP_003058985.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460145|gb|EEH57440.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 295
Score = 234 bits (598), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 138/320 (43%), Positives = 190/320 (59%), Gaps = 26/320 (8%)
Query: 134 ITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTH 193
+ ++VD T+GA GH+ A+I H EL +G DVDP LA A A + + L+ +
Sbjct: 1 MKTYVDGTMGAGGHACAVIGEHLELVTFVGFDVDP--LAHAIAPRGARV-------LELN 51
Query: 194 TFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDP 253
T NFR ++ ++DE L VDAIL+DLG+SSM +++PERGFS DGPLDMRM P
Sbjct: 52 TVLDNFRAMRF---RLDELELNGKVDAILLDLGVSSMHLDSPERGFSFGNDGPLDMRMGP 108
Query: 254 QASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSV 313
+ A D++N WP+ ++ RV+R+YGEE +W L+ +I + R + +T LV I V
Sbjct: 109 SCAFSAMDVVNEWPEEDIARVIRDYGEEKHWRLIARRICERRAEAPILTTSALVRAIGRV 168
Query: 314 TPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLED 373
PG++ R G + ATR FQ +RIAVNDEL +E ++ A D LAPGGRLGVISFHSLED
Sbjct: 169 -PGVKKGRSGNVHPATRTFQGIRIAVNDELGAIEDAIPAAIDALAPGGRLGVISFHSLED 227
Query: 374 RIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWN-GKILTKRPITPSA 432
+IVK F RE A D+ W Q K++T++P++
Sbjct: 228 KIVKDIF-------RERAGRAPPP-----DEGPVSAWAPQPEPPPKVVKLITRKPLSADE 275
Query: 433 EEERLNCRCRSAKLRVIQKI 452
+E R N R RSAKLRV +K+
Sbjct: 276 DEVRENARSRSAKLRVCEKL 295
>gi|384250015|gb|EIE23495.1| bacterial methyltransferase, partial [Coccomyxa subellipsoidea
C-169]
Length = 332
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 147/341 (43%), Positives = 193/341 (56%), Gaps = 20/341 (5%)
Query: 123 EVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLL 182
+VL F R + +FVD TLGA GHS+A++ HP+++L IG+D DP A A A+ L
Sbjct: 1 QVLLAFRG-RPMRTFVDGTLGAGGHSAAVLSQHPDMQLLIGIDKDPIAHAIAQKRLEQAK 59
Query: 183 HGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQ------VNNPE 236
G A+ +K +FR I L + V IL+DLGMSSMQ V+ E
Sbjct: 60 VG-ANSGVKLQQVLVHFRGISQHLRDAEGGEAAGAVSGILLDLGMSSMQARWPTKVDTAE 118
Query: 237 RGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARL 296
RGFS DGPLDMRM P A AE+I+N W +A +GR+ +EYGEE W + +KIV+ R
Sbjct: 119 RGFSFAQDGPLDMRMGPSAVSSAEEIVNCWSEAALGRIFKEYGEERAWRHIAHKIVEVRE 178
Query: 297 RGGLHSTGELVDLI--QSVTPGMRGRRQG---WIKTATRVFQALRIAVNDELKTLESSLH 351
+ +T +L I Q + G GRRQ I ATRVFQALRIAVNDEL LE+++
Sbjct: 179 EKPIRTTLQLAAAIGFQGRSRGT-GRRQSGGKQIHPATRVFQALRIAVNDELGALEAAIP 237
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
+ L PGGRL +ISFHSLEDR VK FL R E + R D + +
Sbjct: 238 DAIEALEPGGRLAIISFHSLEDRAVKWAFLRAA--GRATPEDEQHGPRWQLDSMSGASDV 295
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
R + +I+TKRP+ +E N R RSAKLRV++K+
Sbjct: 296 RPAV----ARIITKRPLLAQEQEAASNPRSRSAKLRVLEKL 332
>gi|297620593|ref|YP_003708730.1| S-adenosyl-methyltransferase [Waddlia chondrophila WSU 86-1044]
gi|297375894|gb|ADI37724.1| S-adenosyl-methyltransferase [Waddlia chondrophila WSU 86-1044]
Length = 306
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 144/337 (42%), Positives = 196/337 (58%), Gaps = 36/337 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L EV + FS + FVD TLGA GHS+ I+ AHPE++ +G+D DP AL AR
Sbjct: 4 HLSVLLEEVAESFSDV-DLKRFVDGTLGAGGHSAEILSAHPEIQRFLGIDQDPDALEIAR 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L+ K NF +K L Q N L VD IL+DLG+SSMQ + P
Sbjct: 63 ERLSKWSE-------KVMFQRGNFSDLKEHLAQ---NGLEK-VDGILLDLGVSSMQFDRP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS+ DGPLDMRM+P+ L A +I+N+WP+AE+G + ++YGEE W + AR
Sbjct: 112 ERGFSLQQDGPLDMRMNPEEPLTAAEIVNTWPEAELGDLFKKYGEEKRWRAAARAVAAAR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGR-RQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
+ T ELV+++ SV GR R+G I AT +FQALR+AVN E++ +E +
Sbjct: 172 ---PISRTLELVEVLTSVL----GRPRKGKIHPATLIFQALRLAVNREIERIEEVIPQAI 224
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
CL PGGRL VISFHSLEDRIVK+ F + D ++E R + I++ + +
Sbjct: 225 GCLNPGGRLAVISFHSLEDRIVKRQFRYLAD--------DKESTRGVGGVFISKEPVVNL 276
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
I T++PI P E N R RS+KLRV++K
Sbjct: 277 I--------TRKPIVPGKAEVERNPRSRSSKLRVVEK 305
>gi|46445945|ref|YP_007310.1| S-adenosyl-methyltransferase [Candidatus Protochlamydia amoebophila
UWE25]
gi|51316230|sp|Q6MEG4.1|RSMH_PARUW RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|46399586|emb|CAF23035.1| probable S-adenosyl-methyltransferase [Candidatus Protochlamydia
amoebophila UWE25]
Length = 316
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 133/337 (39%), Positives = 187/337 (55%), Gaps = 30/337 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L EV++ F + + F+D TLGA GH+ AI+ HPE++L++G+D DP+AL A
Sbjct: 8 HRSVLLEEVIEAFQPVQ-LKVFIDGTLGAGGHAEAILEHHPEIELYLGIDQDPNALNIAN 66
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L K NF L +I S +D +L+DLG+SSMQ++ P
Sbjct: 67 KRLEKWKQ-------KILLKQGNFSQFDIFLKEIG----FSSMDGLLVDLGVSSMQLDQP 115
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS DGPLDMRM+P+ L A DI+N+W + ++G++ R+YGEE W L IVQAR
Sbjct: 116 ERGFSFSKDGPLDMRMNPEGKLTAADIVNTWSEHDLGKIFRDYGEEKKWRLAARTIVQAR 175
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +T +L +L++ P + I T +FQALRI VN EL LE + FD
Sbjct: 176 QVKQILTTTDLANLLK---PAFAWNPKKGINPLTLIFQALRICVNRELDVLEQLVSKTFD 232
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L PGGR+ VISFHSLEDRIVK L + ++ + G L RD
Sbjct: 233 YLKPGGRVAVISFHSLEDRIVKNE-LRLAASDKWETTGLGSGL--FRDKKP--------- 280
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
K++ ++PI P +E + N R RSAK R+ +K+
Sbjct: 281 ---VAKLVNRKPICPHEKEIKENPRSRSAKFRIAEKL 314
>gi|337292933|emb|CCB90932.1| Ribosomal RNA small subunit methyltransferase H [Waddlia
chondrophila 2032/99]
Length = 306
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 141/340 (41%), Positives = 198/340 (58%), Gaps = 42/340 (12%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L EV + FS + FVD TLGA GHS+ I+ AHPE++ +G+D DP AL AR
Sbjct: 4 HLSVLLEEVAESFSDV-DLKRFVDGTLGAGGHSAEILSAHPEIQRFLGIDQDPDALEIAR 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG---VDAILMDLGMSSMQV 232
L+ K NF +K E+++++G VD IL+DLG+SSMQ
Sbjct: 63 ERLSKWSE-------KVVFQRGNFSDLK-------EHLVQNGLEKVDGILLDLGVSSMQF 108
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ PERGFS+ DGPLDMRM+P+ L A +I+N+W +AE+G + ++YGEE W +
Sbjct: 109 DRPERGFSLQQDGPLDMRMNPEEPLTAAEIVNTWSEAELGDLFKKYGEEKRWRAAARAVA 168
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGR-RQGWIKTATRVFQALRIAVNDELKTLESSLH 351
AR + T ELV+++ SV GR R+G I AT +FQALR+AVN E++ +E +
Sbjct: 169 AAR---PISRTLELVEVLTSVL----GRPRKGKIHPATLIFQALRLAVNREIERIEEVIP 221
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
CL PGGRL VISFHSLEDRIVK+ F + D ++E R + I++ +
Sbjct: 222 QAIGCLNPGGRLAVISFHSLEDRIVKRQFRYLAD--------DKESTRGVGGVFISKEPV 273
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+I T++PI P E N R RS+KLRV++K
Sbjct: 274 VNLI--------TRKPIVPGKAEVERNPRSRSSKLRVVEK 305
>gi|338175957|ref|YP_004652767.1| ribosomal RNA smaLL subunit methyltransferase H [Parachlamydia
acanthamoebae UV-7]
gi|336480315|emb|CCB86913.1| ribosomal RNA smaLL subunit methyltransferase H [Parachlamydia
acanthamoebae UV-7]
Length = 310
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 135/338 (39%), Positives = 194/338 (57%), Gaps = 33/338 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V++ EV++ FSS ++ F+D T GA GHS+A++ AHPE++ I +D DP AL A
Sbjct: 5 HQSVLMKEVIESFSSC-SLRIFIDGTAGAGGHSAALLAAHPEIERLIAIDQDPLALTVAA 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+L P + TF NF +++ L Q++ S VD IL+DLG+SSMQ++
Sbjct: 64 ENLA--------PWSEKVTFVSGNFENLEKFLDQLE----ISTVDGILLDLGVSSMQLDI 111
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
E+GFS +GPLDMRMDP+ L A ++N+WP E+ R+ R+YGEE +W IVQA
Sbjct: 112 AEKGFSFSKEGPLDMRMDPRNPLTAAIVVNTWPQKELERIFRDYGEERHWRAAARAIVQA 171
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +T +LV++++ P +R I T VFQALRI VN EL +E + A
Sbjct: 172 RAEKQILTTQQLVEVLR---PVLRFNPAKRIHPCTLVFQALRICVNKELDVVERVIPAAI 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
L GGRLG+ISFHSLED IVK F ++ D G R+ +D +
Sbjct: 229 RRLKKGGRLGIISFHSLEDGIVKNLFRHAAS-DKWDTRGLAGLFRD-KDPEV-------- 278
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++LT++P+ + EE N R RSAKLRV++K+
Sbjct: 279 ------RLLTRKPLVANDEEVAANPRSRSAKLRVLEKL 310
>gi|375309406|ref|ZP_09774687.1| ribosomal RNA small subunit methyltransferase h [Paenibacillus sp.
Aloe-11]
gi|375078715|gb|EHS56942.1| ribosomal RNA small subunit methyltransferase h [Paenibacillus sp.
Aloe-11]
Length = 316
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 137/319 (42%), Positives = 177/319 (55%), Gaps = 29/319 (9%)
Query: 137 FVDCTLGAAGHSSAII-RAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTF 195
+VDCTLG AGHSS I + PE +L I D D AL AR L++ K
Sbjct: 24 YVDCTLGGAGHSSVIASQLGPEGRL-IAFDQDDWALDNAREKLSAY-------QGKISLV 75
Query: 196 AKNFRHIKSVLGQI--DENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDP 253
NFRH++ L ++ E V IL DLG+SS Q + ERGFS D PLDMRMD
Sbjct: 76 KSNFRHLQDKLAELGLPEKDGVPQVQGILFDLGVSSPQFDEGERGFSYNHDAPLDMRMDQ 135
Query: 254 QASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSV 313
+SL A +I+N WP+AE+ R+L +YGEE + +++ RL +H+TGELVD+I+
Sbjct: 136 SSSLTAYEIVNEWPEAEIARILFQYGEEKFSRRIAKIMIERRLNKPIHTTGELVDIIKEG 195
Query: 314 TPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLED 373
P R G A R FQALRIAVNDEL LE +LH CLAPGGR+ VI+FHSLED
Sbjct: 196 IPAAARRTGG--HPAKRSFQALRIAVNDELGALEDTLHQAIKCLAPGGRISVITFHSLED 253
Query: 374 RIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAE 433
RI K F + A+ I DD + + K++ ++PI S +
Sbjct: 254 RICKHIFKEYL------AKSIYPSDLPILDDKMV----------GDLKLVNRKPIVASEQ 297
Query: 434 EERLNCRCRSAKLRVIQKI 452
E LN R RSAKLRV +K+
Sbjct: 298 ELELNPRSRSAKLRVAEKL 316
>gi|310642996|ref|YP_003947754.1| ribosomal RNA small subunit methyltransferase h [Paenibacillus
polymyxa SC2]
gi|309247946|gb|ADO57513.1| Ribosomal RNA small subunit methyltransferase H [Paenibacillus
polymyxa SC2]
gi|392303810|emb|CCI70173.1| S-adenosyl-methyltransferase [Paenibacillus polymyxa M1]
Length = 316
Score = 214 bits (544), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 138/319 (43%), Positives = 178/319 (55%), Gaps = 29/319 (9%)
Query: 137 FVDCTLGAAGHSSAII-RAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTF 195
+VDCTLG AGHSS I + PE +L I D D AL AR L++ K
Sbjct: 24 YVDCTLGGAGHSSVIASQLGPEGRL-IAFDQDDWALNNAREKLSAY-------EGKISLV 75
Query: 196 AKNFRHIKSVLGQI--DENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDP 253
NFRH++ L ++ E V IL DLG+SS Q + ERGFS D PLDMRMD
Sbjct: 76 KSNFRHLQDKLAELGLPEKDGVPQVQGILFDLGVSSPQFDEGERGFSYNHDAPLDMRMDQ 135
Query: 254 QASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSV 313
+SL A +I+N WP+AE+ R+L +YGEE + +V+ R+ +H+TGELVD+I+
Sbjct: 136 SSSLTAYEIVNEWPEAEIARILFQYGEEKFSRRIAKIMVERRMNKPIHTTGELVDIIKEG 195
Query: 314 TPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLED 373
P RR G A R FQALRIAVNDEL LE +LH CLAPGGR+ VI+FHSLED
Sbjct: 196 IPAA-ARRTGG-HPAKRSFQALRIAVNDELGALEDTLHQAVRCLAPGGRISVITFHSLED 253
Query: 374 RIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAE 433
RI K F + A+ I DD + + K++ ++PI S +
Sbjct: 254 RICKHIFKEYL------AKSIYPSDLPILDDKMV----------GDLKLVNRKPIVASEQ 297
Query: 434 EERLNCRCRSAKLRVIQKI 452
E LN R RSAKLRV +K+
Sbjct: 298 ELELNPRSRSAKLRVAEKL 316
>gi|315646023|ref|ZP_07899144.1| S-adenosyl-methyltransferase MraW [Paenibacillus vortex V453]
gi|315278784|gb|EFU42098.1| S-adenosyl-methyltransferase MraW [Paenibacillus vortex V453]
Length = 317
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 136/322 (42%), Positives = 174/322 (54%), Gaps = 34/322 (10%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
+VDCTLG AGHSS I I +D D AL AR + P++ T
Sbjct: 24 YVDCTLGGAGHSSLIASQLSSNGRLIALDQDDWALNNAREVMK--------PYVDRITLV 75
Query: 197 K-NFRHIKSVLG---QIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMD 252
K NFR ++ VL +DEN + VD IL DLG+SS Q + ERGFS D PLDMRMD
Sbjct: 76 KTNFRDLEEVLRIEVGVDEN-GQPQVDGILFDLGVSSPQFDEGERGFSYNHDAPLDMRMD 134
Query: 253 PQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQS 312
A L A I+N WP+ E+ R+L EYGEE + IV+ R++G +H+TGELV++I+
Sbjct: 135 QSAELTAAKIVNEWPEQEIARILYEYGEEKFSRRIAKVIVERRVQGPIHTTGELVEMIKE 194
Query: 313 VTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLE 372
P R G A R FQA RIAVNDEL + +LH CLAPGGR+ VI+FHSLE
Sbjct: 195 GIPAAARRTGG--HPAKRSFQAFRIAVNDELGAFKDALHQAVRCLAPGGRVSVITFHSLE 252
Query: 373 DRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNG--KILTKRPITP 430
DRI KQ F S I + + G G K++ ++P+ P
Sbjct: 253 DRICKQIFNSYIPKC-----------------TCPPDFPMCVCGGGQGDLKLVNRKPLIP 295
Query: 431 SAEEERLNCRCRSAKLRVIQKI 452
S EE N R RSAKLR+ +K+
Sbjct: 296 SVEEIESNPRARSAKLRIAEKL 317
>gi|389573372|ref|ZP_10163447.1| S-adenosyl-methyltransferase MraW [Bacillus sp. M 2-6]
gi|388427069|gb|EIL84879.1| S-adenosyl-methyltransferase MraW [Bacillus sp. M 2-6]
Length = 310
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 137/342 (40%), Positives = 184/342 (53%), Gaps = 42/342 (12%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + T +VDCTLG AGHSS ++ E IG D D +AL AR
Sbjct: 4 HETVLLKETVDGLNVKEDGT-YVDCTLGGAGHSSYLLSQLSEKGTLIGFDQDDAALDHAR 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L AH NFR++K L + + I + VD ++ DLG+SS Q++ P
Sbjct: 63 EKL-------AHVKANILFIKSNFRYLKERLNE--QGI--TSVDGVIFDLGVSSPQLDTP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD A+L A+ ++N WP ++ R+ +YGEE + KI +AR
Sbjct: 112 ERGFSYHHDAPLDMRMDQTAALSAKQVVNEWPFEDLVRIFYKYGEEKFSKQIARKIEEAR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +TGELVD+I+ P R+ G A RVFQA+RIAVNDELK E +L +
Sbjct: 172 KKAPIETTGELVDIIKEGIPAPARRKGGH--PAKRVFQAIRIAVNDELKVFEEALEQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTF-----LSIIDHNRE-DAEGNEEELRNIRDDNINET 409
L P GR+ VI+FHSLEDRI K TF L + H EG E +L
Sbjct: 230 LLNPKGRISVITFHSLEDRICKSTFKEMSSLPELPHGLPVIPEGLEPKL----------- 278
Query: 410 WIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PI S +E N R RSAKLR+ +K
Sbjct: 279 -----------KLITRKPIVASEQELEYNNRARSAKLRIAEK 309
>gi|295696471|ref|YP_003589709.1| S-adenosyl-methyltransferase MraW [Kyrpidia tusciae DSM 2912]
gi|295412073|gb|ADG06565.1| S-adenosyl-methyltransferase MraW [Kyrpidia tusciae DSM 2912]
Length = 315
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 142/341 (41%), Positives = 187/341 (54%), Gaps = 37/341 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKA 174
H PV+L EVL + R +VD TLG GH+ AI+ A P+ +L IG+D D AL +
Sbjct: 5 HEPVLLHEVLAILQP-RPGGLYVDGTLGGGGHAQAILEAAAPDGRL-IGIDQDDEALTAS 62
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVL---GQIDENILRSGVDAILMDLGMSSMQ 231
+ L +G + T NFR IK +L G I+ GVD IL+D+G+SS Q
Sbjct: 63 KERLTP--YGG-----RVTTVKGNFRRIKEILWGLGVIE------GVDGILLDVGLSSPQ 109
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
V+ ERGFS D PLDMRMD +L A DI+NSWP+ E+ RV+R+YGEE + I
Sbjct: 110 VDEAERGFSYRSDAPLDMRMDLSGTLTARDIVNSWPEGELARVVRDYGEERWAARIAKAI 169
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
V+ R R + +TGEL +L++ P RR G A R FQALRIAVNDEL LE +
Sbjct: 170 VRRRQRQAIETTGELAELVKEAIPAA-ARRHG-PHPARRTFQALRIAVNDELGALEEGVK 227
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
+ L PGGRL VI+FHSLEDRIVK+ EE R+ E +
Sbjct: 228 GALEVLRPGGRLAVIAFHSLEDRIVKRIL--------------AEEARSC--ICPPEAPV 271
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ +++ +RPI P EE N R RSAKLR +++
Sbjct: 272 CTCGRRPRVRLIGRRPIVPGPEELARNPRARSAKLRGAERL 312
>gi|374324856|ref|YP_005077985.1| 16S rRNA m(4)C1402 methyltransferase [Paenibacillus terrae HPL-003]
gi|357203865|gb|AET61762.1| 16S rRNA m(4)C1402 methyltransferase [Paenibacillus terrae HPL-003]
Length = 316
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 137/319 (42%), Positives = 177/319 (55%), Gaps = 29/319 (9%)
Query: 137 FVDCTLGAAGHSSAII-RAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTF 195
+VDCTLG AGHSS I + PE +L I D D AL AR L++ K
Sbjct: 24 YVDCTLGGAGHSSVIASQLGPEGRL-IAFDQDDWALNNAREKLSAY-------EGKISLV 75
Query: 196 AKNFRHIKSVLGQI--DENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDP 253
NFRH++ L ++ E V IL DLG+SS Q + ERGFS D PLDMRMD
Sbjct: 76 KSNFRHLQDRLAELGLPEKDGVPQVQGILFDLGVSSPQFDEGERGFSYNHDAPLDMRMDQ 135
Query: 254 QASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSV 313
+SL A +I+N WP+AE+ R+L YGEE + +V+ R +H+TGELVD+I+
Sbjct: 136 SSSLTAYEIVNEWPEAEIARILFHYGEEKFSRRIAKIMVERRKNKPIHTTGELVDIIKEG 195
Query: 314 TPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLED 373
P RR G A R FQALRIAVNDEL LE +LH CLAPGGR+ VI+FHSLED
Sbjct: 196 IPAA-ARRTGG-HPAKRSFQALRIAVNDELGALEDTLHQAVKCLAPGGRISVITFHSLED 253
Query: 374 RIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAE 433
RI K F + + + +L + D I + K++ ++PI S +
Sbjct: 254 RICKHIFKEYLAKSIYPS-----DLPILEDKMIGDL-----------KLVNRKPIVASEQ 297
Query: 434 EERLNCRCRSAKLRVIQKI 452
E LN R RSAKLRV +K+
Sbjct: 298 ELELNPRSRSAKLRVAEKL 316
>gi|251797883|ref|YP_003012614.1| S-adenosyl-methyltransferase MraW [Paenibacillus sp. JDR-2]
gi|262824736|sp|C6D563.1|RSMH_PAESJ RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|247545509|gb|ACT02528.1| S-adenosyl-methyltransferase MraW [Paenibacillus sp. JDR-2]
Length = 316
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 137/342 (40%), Positives = 184/342 (53%), Gaps = 34/342 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+L E +D + + +VDCTLG AGHS I+ I D D +AL AR
Sbjct: 4 HITVLLEEAVDGLAI-KPGGIYVDCTLGGAGHSERIVSQLSGGGRLIAFDQDDAALDNAR 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRS--GVDAILMDLGMSSMQV 232
L P++ T K NFR+++ +L D + VD IL DLG+SS Q+
Sbjct: 63 VRLA--------PYMDRVTLVKSNFRYLEEMLLTCDVPTVDGVPQVDGILFDLGVSSPQL 114
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ ERGFS D PLDMRMD +L A DI+NSW + E+ R+L YGEE + KIV
Sbjct: 115 DEAERGFSYNHDAPLDMRMDQGGALTAYDIVNSWEEREISRILHVYGEEKFARSIARKIV 174
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
QAR + +TGEL +L+++ P RR G A R FQALRIAVNDEL E +L
Sbjct: 175 QARENAPIETTGELAELVKTGIPAA-ARRTGG-HPAKRSFQALRIAVNDELGAEEDALEE 232
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
C+ PGGR+ VI+FHSLEDRI KQ F S ++ +
Sbjct: 233 AVKCIRPGGRISVITFHSLEDRICKQLFASYVEKCTCPPD------------------FP 274
Query: 413 QIIQGWNGK--ILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ + G GK ++ ++PI P+ +E +N R RSAKLRV +K+
Sbjct: 275 KCVCGGTGKLRLVNRKPIVPTEQELEVNPRSRSAKLRVAEKL 316
>gi|282889763|ref|ZP_06298302.1| hypothetical protein pah_c004o134 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281500337|gb|EFB42617.1| hypothetical protein pah_c004o134 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 310
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 133/338 (39%), Positives = 192/338 (56%), Gaps = 33/338 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V++ EV++ FS ++ F+D T GA GHS+A++ HPE++ I +D DP AL A
Sbjct: 5 HQSVLMKEVIESFSPC-SLRIFIDGTAGAGGHSAALLATHPEIERLIAIDQDPLALTVAA 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+L P + TF NF +++ L Q++ S VD IL+DLG+SSMQ++
Sbjct: 64 ENLA--------PWSEKVTFVSGNFENLEKFLDQLE----ISTVDGILLDLGVSSMQLDI 111
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
E+GFS +GPLDMRMDP+ L A ++N+WP E+ R+ R+YGEE +W IVQA
Sbjct: 112 AEKGFSFSKEGPLDMRMDPRNPLTAAIVVNTWPQKELERIFRDYGEERHWRAAARAIVQA 171
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +T +LV++++ P +R I T VFQALRI VN EL +E + A
Sbjct: 172 RAEKQILTTQQLVEVLR---PVLRFNPAKRIHPCTLVFQALRICVNKELDVVERVIPAAI 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
L GGRLG+ISFHSLED IVK F ++ D G R+ +D +
Sbjct: 229 RRLKKGGRLGIISFHSLEDGIVKNLFRHAAS-DKWDTRGLAGLFRD-KDPEV-------- 278
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++LT++P+ + EE N R RSAKLRV++K+
Sbjct: 279 ------RLLTRKPLVANDEEVAANPRSRSAKLRVLEKL 310
>gi|390453126|ref|ZP_10238654.1| 16S rRNA m(4)C1402 methyltranserfase [Paenibacillus peoriae KCTC
3763]
Length = 316
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 135/319 (42%), Positives = 178/319 (55%), Gaps = 29/319 (9%)
Query: 137 FVDCTLGAAGHSSAII-RAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTF 195
+VDCTLG AGHSS I + PE +L I D D AL AR L++ K
Sbjct: 24 YVDCTLGGAGHSSVIASQLGPEGRL-IAFDQDDWALDNAREKLSAY-------QGKISLV 75
Query: 196 AKNFRHIKSVLGQI--DENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDP 253
NFR+++ L ++ E V IL DLG+SS Q + ERGFS D PLDMRMD
Sbjct: 76 KSNFRYLQDKLAELGLPEKDGVPQVQGILFDLGVSSPQFDEGERGFSYNHDAPLDMRMDQ 135
Query: 254 QASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSV 313
+SL A +I+N WP+AE+ R+L +YGEE + +++ R+ +H+TGELVD+I+
Sbjct: 136 SSSLTAYEIVNEWPEAEIARILFQYGEEKFSRRIAKIMIERRMNKPIHTTGELVDIIKEG 195
Query: 314 TPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLED 373
P RR G A R FQALRIAVNDEL+ LE +LH CLAPGGR+ VI+FHSLED
Sbjct: 196 IPAA-ARRTGG-HPAKRSFQALRIAVNDELRALEDTLHQAIKCLAPGGRISVITFHSLED 253
Query: 374 RIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAE 433
RI K F + A+ I DD + + K++ ++PI S +
Sbjct: 254 RICKHIFKEYL------AKSIYPSDLPILDDKMV----------GDLKLVNRKPIVASEQ 297
Query: 434 EERLNCRCRSAKLRVIQKI 452
E N R RSAKLRV +K+
Sbjct: 298 ELEHNPRSRSAKLRVAEKL 316
>gi|308069889|ref|YP_003871494.1| S-adenosyl-methyltransferase mraW [Paenibacillus polymyxa E681]
gi|305859168|gb|ADM70956.1| S-adenosyl-methyltransferase mraW [Paenibacillus polymyxa E681]
Length = 316
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 137/319 (42%), Positives = 179/319 (56%), Gaps = 29/319 (9%)
Query: 137 FVDCTLGAAGHSSAII-RAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTF 195
+VDCTLG AGHSS I + PE +L I D D AL AR L++ K
Sbjct: 24 YVDCTLGGAGHSSVIASQLGPEGRL-IAFDQDDWALNNAREKLSAY-------EGKISLV 75
Query: 196 AKNFRHIKSVLGQI--DENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDP 253
NFRH++ L ++ E V IL DLG+SS Q + ERGFS D PLDMRMD
Sbjct: 76 KSNFRHLQDKLTELGLPEKDGVPQVQGILFDLGVSSPQFDEGERGFSYNHDAPLDMRMDQ 135
Query: 254 QASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSV 313
+SL A +I+N W +AE+ R+L YGEE + +++ RL +H+TGELVD+I+
Sbjct: 136 SSSLTAYEIVNEWSEAEIARILFHYGEEKFSRRIAKIMIERRLNKPIHTTGELVDIIKEG 195
Query: 314 TPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLED 373
P RR G A R FQALRIAVNDEL LE SLH CLAPGGR+ VI+FHSLED
Sbjct: 196 IPAA-ARRTGG-HPAKRSFQALRIAVNDELGALEDSLHQAIRCLAPGGRISVITFHSLED 253
Query: 374 RIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAE 433
RI K F E ++I ++ + ++G + K++ ++PI S +
Sbjct: 254 RICKHIF-------------KEYLAKSIYPSDL--PILEDKMEG-DLKLVNRKPIMASEQ 297
Query: 434 EERLNCRCRSAKLRVIQKI 452
E LN R RSAKLRV +K+
Sbjct: 298 ELELNPRSRSAKLRVAEKL 316
>gi|374602392|ref|ZP_09675385.1| 16S rRNA m(4)C1402 methyltransferase [Paenibacillus dendritiformis
C454]
gi|374391994|gb|EHQ63323.1| 16S rRNA m(4)C1402 methyltransferase [Paenibacillus dendritiformis
C454]
Length = 316
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 143/345 (41%), Positives = 183/345 (53%), Gaps = 40/345 (11%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+ E ++ + R +VDCTLG AGHSSAI I +D D AL A
Sbjct: 4 HITVLKEEAVNGLNV-RPDGIYVDCTLGGAGHSSAIASVLSADGRLIALDQDDWALDNAA 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILR--SGVDAILMDLGMSSMQV 232
L P+L T K NFRHI+ L Q + + VD IL DLG+SS Q+
Sbjct: 63 NVLA--------PYLDRVTMIKTNFRHIEDALRQAEVPFVDGVPQVDGILFDLGVSSPQL 114
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ ERGFS D PLDMRMD SL A +I+N WP+ E+ R+L EYGEE + +I+
Sbjct: 115 DEGERGFSYQHDAPLDMRMDRSTSLTAREIVNEWPEEEIARILFEYGEEKFSRRIARRIM 174
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
+AR + +TGEL +L+++ P R G A R FQALRIAVNDEL E +LH
Sbjct: 175 EARADHPIETTGELAELVKAGIPAATRRTGG--HPAKRSFQALRIAVNDELGAFEQALHQ 232
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
CL PGGR+ VI+FHSLEDRI KQTF ++ T
Sbjct: 233 AIHCLKPGGRVAVITFHSLEDRICKQTFNQYMNRC---------------------TCPP 271
Query: 413 QIIQGWNGK--ILT---KRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ GK ILT ++PI PSA+E N R RSA+LRV +K+
Sbjct: 272 DLPMCACGKQDILTLPKRKPIVPSADELERNPRSRSARLRVAEKL 316
>gi|443632820|ref|ZP_21116999.1| S-adenosyl-methyltransferase MraW [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
gi|443347643|gb|ELS61701.1| S-adenosyl-methyltransferase MraW [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
Length = 311
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 138/348 (39%), Positives = 188/348 (54%), Gaps = 54/348 (15%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + + ++VDCTLG AGHS+ +++ E I D D +AL A+
Sbjct: 4 HKTVLLHETVDGLNI-KPDGTYVDCTLGGAGHSTYLLQQLSEKGRLIAFDQDDTALQHAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L+ GQ NFR++K L + + I + VD IL DLG+SS Q++ P
Sbjct: 63 EALSDY-KGQ------LILIKSNFRYLKECLNE--QGI--TEVDGILFDLGVSSPQLDTP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD A+L A++++N W ++ R+ +YGEE + KI +AR
Sbjct: 112 ERGFSYHHDAPLDMRMDQSATLTAKEVVNEWRYEDLVRIFFKYGEEKFSKQIARKIEEAR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
++ + +TG+LVDLI+ P RR G A RVFQA+RIAVNDELK E +L +
Sbjct: 172 IKSPIQTTGQLVDLIKDAIPAP-ARRSGG-HPAKRVFQAIRIAVNDELKVFEEALEQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTF------------LSIIDHNREDAEGNEEELRNIRD 403
L PGGR+ VI+FHSLEDRI K TF L +I E E EL
Sbjct: 230 VLKPGGRVSVITFHSLEDRICKSTFKEKSSLPELPPGLPVI------PEEFEPEL----- 278
Query: 404 DNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PIT S EE N R RSAKLR+ +K
Sbjct: 279 -----------------KLITRKPITASHEELEENNRARSAKLRIAEK 309
>gi|449094208|ref|YP_007426699.1| S-adenosyl-methyltransferase MraW [Bacillus subtilis XF-1]
gi|449028123|gb|AGE63362.1| S-adenosyl-methyltransferase MraW [Bacillus subtilis XF-1]
Length = 311
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 137/348 (39%), Positives = 188/348 (54%), Gaps = 54/348 (15%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + + ++VDCTLG AGHS+ +++ E I D D +AL A+
Sbjct: 4 HKTVLLRETVDGLNI-KPDGTYVDCTLGGAGHSTYLLQQLSEKGRLIAFDQDDTALQHAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L+ GQ NFR++K L + + I + VD IL DLG+SS Q++ P
Sbjct: 63 EMLSDY-KGQ------LILIKSNFRYLKECLNE--QGI--TEVDGILFDLGVSSPQLDTP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD A+L A++++N W ++ R+ +YGEE + KI +AR
Sbjct: 112 ERGFSYHHDAPLDMRMDQSATLSAKEVVNEWRYEDLVRIFFKYGEEKFSKQIARKIEEAR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
++ + +TG+LVDLI+ P RR G A RVFQA+RIAVNDEL+ E +L +
Sbjct: 172 MKSPIQTTGQLVDLIKDAIPAP-ARRSGG-HPAKRVFQAIRIAVNDELRVFEEALEQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTF------------LSIIDHNREDAEGNEEELRNIRD 403
L PGGR+ VI+FHSLEDRI K TF L +I E E EL
Sbjct: 230 VLKPGGRVSVITFHSLEDRICKTTFKEKSSLPELPPGLPVI------PEEFEPEL----- 278
Query: 404 DNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PIT S EE N R RSAKLR+ +K
Sbjct: 279 -----------------KLITRKPITASQEELEENNRARSAKLRIAEK 309
>gi|384175256|ref|YP_005556641.1| S-adenosyl-methyltransferase MraW [Bacillus subtilis subsp.
subtilis str. RO-NN-1]
gi|349594480|gb|AEP90667.1| S-adenosyl-methyltransferase MraW [Bacillus subtilis subsp.
subtilis str. RO-NN-1]
Length = 311
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 138/348 (39%), Positives = 188/348 (54%), Gaps = 54/348 (15%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + + ++VDCTLG AGHS+ +++ E I D D +AL A+
Sbjct: 4 HKTVLLRETVDGLNI-KPDGTYVDCTLGGAGHSTYLLQQLSEKGRLIAFDQDDTALQHAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L+ GQ NFR++K L + + I + VD IL DLG+SS Q++ P
Sbjct: 63 EVLSDY-KGQ------LILIKSNFRYLKECLNE--QGI--TEVDGILFDLGVSSPQLDTP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD A+L A++++N W ++ R+ +YGEE + KI +AR
Sbjct: 112 ERGFSYHHDAPLDMRMDQSATLSAKEVVNEWRYEDLVRIFFKYGEEKFSKQIARKIEEAR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
++ L +TG+LVDLI+ P RR G A RVFQA+RIAVNDEL+ E +L +
Sbjct: 172 MKSPLQTTGQLVDLIKDAIPAP-ARRSGG-HPAKRVFQAIRIAVNDELRVFEEALEQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTF------------LSIIDHNREDAEGNEEELRNIRD 403
L PGGR+ VI+FHSLEDRI K TF L +I E E EL
Sbjct: 230 VLKPGGRVSVITFHSLEDRICKTTFKEKSSLPELPPGLPVI------PEEFEPEL----- 278
Query: 404 DNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PIT S EE N R RSAKLR+ +K
Sbjct: 279 -----------------KLITRKPITASQEELEENNRARSAKLRIAEK 309
>gi|452974585|gb|EME74405.1| 16S rRNA m(4)C1402 methyltransferase [Bacillus sonorensis L12]
Length = 312
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 135/337 (40%), Positives = 189/337 (56%), Gaps = 32/337 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + + ++VDCTLG AGHS+ ++ + I D D +AL A+
Sbjct: 4 HKTVLLKETVDGLNV-KADGTYVDCTLGGAGHSAYLLSQLSKDGRLIAFDQDETALRHAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L GQ TF K NFR++K L +I I + VD +L DLG+SS Q++
Sbjct: 63 EKLAGY-EGQV-------TFIKSNFRYLKDRLNEI--GIFQ--VDGVLFDLGVSSPQLDT 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
PERGFS D PLDMRMD A L A++++N W ++ ++ +YGEE + KI +A
Sbjct: 111 PERGFSYHHDAPLDMRMDQSAGLSAKEVVNEWRYEDLVKIFFKYGEEKFSKQIARKIEEA 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + + +TG+LVD+I+ P RR G A R+FQA+RIAVNDELK E +L
Sbjct: 171 RGKSAIQTTGQLVDIIKEAIPAP-ARRSGG-HPAKRIFQAIRIAVNDELKVFEEALLQAV 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
D + PGGR+ VI+FHSLEDRI K TF +EL ++ + I +
Sbjct: 229 DVVKPGGRVSVITFHSLEDRICKTTF---------------KELSSLPELPHGLPVIPKE 273
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ K++ K+PITPS EE N R RSAKLR+ +K
Sbjct: 274 FEP-KLKLVNKKPITPSKEELENNNRARSAKLRIAEK 309
>gi|350265824|ref|YP_004877131.1| S-adenosyl-methyltransferase MraW [Bacillus subtilis subsp.
spizizenii TU-B-10]
gi|349598711|gb|AEP86499.1| S-adenosyl-methyltransferase MraW [Bacillus subtilis subsp.
spizizenii TU-B-10]
Length = 311
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 138/348 (39%), Positives = 187/348 (53%), Gaps = 54/348 (15%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + + ++VDCTLG AGHS+ +++ E I D D AL A+
Sbjct: 4 HKTVLLRETVDGLNI-KPDGTYVDCTLGGAGHSTYLLQQLSEKGRLIAFDQDDMALQHAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L+ GQ NFR++K L + + I + VD IL DLG+SS Q++ P
Sbjct: 63 EALSDY-KGQ------LILIKSNFRYLKECLNE--QGI--TEVDGILFDLGVSSPQLDTP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD A+L A++++N W ++ R+ +YGEE + KI +AR
Sbjct: 112 ERGFSYHHDAPLDMRMDQSATLTAKEVVNEWRYEDLVRIFFKYGEEKFSKQIARKIEEAR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
++ + +TG+LVDLI+ P RR G A RVFQA+RIAVNDELK E +L +
Sbjct: 172 IKSPIQTTGQLVDLIKDAIPAP-ARRSGG-HPAKRVFQAIRIAVNDELKVFEEALEQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTF------------LSIIDHNREDAEGNEEELRNIRD 403
L PGGR+ VI+FHSLEDRI K TF L +I E E EL
Sbjct: 230 VLKPGGRVSVITFHSLEDRICKSTFKEKSSLPELPPGLPVI------PEEFEPEL----- 278
Query: 404 DNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PIT S EE N R RSAKLR+ +K
Sbjct: 279 -----------------KLITRKPITASQEELEENNRARSAKLRIAEK 309
>gi|399052139|ref|ZP_10741704.1| S-adenosyl-methyltransferase MraW [Brevibacillus sp. CF112]
gi|398050005|gb|EJL42395.1| S-adenosyl-methyltransferase MraW [Brevibacillus sp. CF112]
Length = 311
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 134/338 (39%), Positives = 185/338 (54%), Gaps = 32/338 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+ E +D + R +VDCTLG AGHSS I E I +D D A AR
Sbjct: 5 HVTVLRDEAVDGLNI-RPGGIYVDCTLGGAGHSSLIASRLTEGGRLIAIDQDDWAHDNAR 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L P++ T K NFRH+K ++ +++ +GVD +L DLG+SS Q++
Sbjct: 64 ERLA--------PYMDKVTLVKSNFRHLKEIV----KDLGLTGVDGVLFDLGVSSPQLDE 111
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS D PLDMRMD QA L A DI+N W + E+ +++ YGEE + +IVQ
Sbjct: 112 GERGFSYNADAPLDMRMDQQAPLSAYDIVNEWDEEEIAKIIWLYGEEKFSRRIARQIVQQ 171
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + + +TGELV+LI+ P R G A R FQA+RIAVNDEL + ++
Sbjct: 172 RKKQPIRTTGELVELIKEGIPAAARRTGG--HPAKRTFQAIRIAVNDELDAFKEAVADAI 229
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
D L PGGR+ VI+FHSLEDRI KQ + D+++ + ++ I
Sbjct: 230 DILNPGGRVSVITFHSLEDRICKQVYQ---DYSKGCTCPPSFPICTCGNEAIV------- 279
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
K++T++PI PS EE N R RSAKLRV +K+
Sbjct: 280 ------KVITRKPILPSEEELAANPRARSAKLRVAEKV 311
>gi|407977704|ref|ZP_11158541.1| 16S rRNA m(4)C1402 methyltransferase [Bacillus sp. HYC-10]
gi|407415957|gb|EKF37538.1| 16S rRNA m(4)C1402 methyltransferase [Bacillus sp. HYC-10]
Length = 310
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 137/342 (40%), Positives = 183/342 (53%), Gaps = 42/342 (12%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + T +VDCTLG AGHSS ++ E IG D D +AL AR
Sbjct: 4 HETVLLKETVDGLNVKEDGT-YVDCTLGGAGHSSYLLSQLSEKGTLIGFDQDDAALDHAR 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L A NFR++K L + + I + VD ++ DLG+SS Q++ P
Sbjct: 63 KKL-------ADAKANILFIKSNFRYLKERLNE--QGI--TSVDGVIFDLGVSSPQLDTP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD A+L A+ ++N WP ++ R+ +YGEE + KI +AR
Sbjct: 112 ERGFSYHHDAPLDMRMDQTAALSAKQVVNEWPFEDLVRIFYKYGEEKFSKQIARKIEEAR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +TGELVD+I+ P RR G A RVFQA+RIAVNDELK E +L +
Sbjct: 172 KKAPIETTGELVDIIKEGIPA-PARRTGG-HPAKRVFQAIRIAVNDELKVFEEALEQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTF-----LSIIDHNRE-DAEGNEEELRNIRDDNINET 409
L P GR+ VI+FHSLEDRI K TF L + H EG E +L
Sbjct: 230 LLNPKGRISVITFHSLEDRICKSTFKEMSSLPELPHGLPVIPEGLEPKL----------- 278
Query: 410 WIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PI S +E N R RSAKLR+ +K
Sbjct: 279 -----------KLITRKPIVASEQELENNNRARSAKLRIAEK 309
>gi|194014300|ref|ZP_03052917.1| S-adenosyl-methyltransferase MraW [Bacillus pumilus ATCC 7061]
gi|194013326|gb|EDW22891.1| S-adenosyl-methyltransferase MraW [Bacillus pumilus ATCC 7061]
Length = 310
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 137/342 (40%), Positives = 183/342 (53%), Gaps = 42/342 (12%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + T +VDCTLG AGHSS ++ E IG D D +AL AR
Sbjct: 4 HETVLLKETVDGLNVKEDGT-YVDCTLGGAGHSSYLLSQLSEKGTLIGFDQDDAALDHAR 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L A NFR++K L + + I + VD ++ DLG+SS Q++ P
Sbjct: 63 EKL-------ADSKANILFIKSNFRYLKERLNE--QGI--TSVDGVIFDLGVSSPQLDTP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD A+L A+ ++N WP ++ R+ +YGEE + KI +AR
Sbjct: 112 ERGFSYHHDAPLDMRMDQSAALSAKKVVNEWPFEDLVRIFYKYGEEKFSKQIARKIEEAR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +TGELVD+I+ P RR G A RVFQA+RIAVNDELK E +L +
Sbjct: 172 KKAPIETTGELVDIIKEGIPAP-ARRTGG-HPAKRVFQAIRIAVNDELKVFEEALEQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTF-----LSIIDHNRE-DAEGNEEELRNIRDDNINET 409
L P GR+ VI+FHSLEDRI K TF L + H EG E +L
Sbjct: 230 LLNPKGRISVITFHSLEDRICKSTFREMSSLPELPHGLPVIPEGLEPKL----------- 278
Query: 410 WIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PI S +E N R RSAKLR+ +K
Sbjct: 279 -----------KLITRKPIVASEQELEHNNRARSAKLRIAEK 309
>gi|296331089|ref|ZP_06873563.1| S-adenosyl-methyltransferase MraW [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305674244|ref|YP_003865916.1| S-adenosyl-dependent methyltransferase active on membrane-located
substrates [Bacillus subtilis subsp. spizizenii str.
W23]
gi|296151733|gb|EFG92608.1| S-adenosyl-methyltransferase MraW [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305412488|gb|ADM37607.1| S-adenosyl-dependent methyltransferase active on membrane-located
substrates [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 311
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 138/348 (39%), Positives = 187/348 (53%), Gaps = 54/348 (15%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + + ++VDCTLG AGHS+ +++ E I D D AL A+
Sbjct: 4 HKTVLLRETVDGLNI-KPDGTYVDCTLGGAGHSTYLLQQLSEKGRLIAFDQDDMALQHAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L+ GQ NFR++K L + + I + VD IL DLG+SS Q++ P
Sbjct: 63 EALSDY-KGQ------LILIKSNFRYLKECLKE--QGI--TEVDGILFDLGVSSPQLDTP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD A+L A++++N W ++ R+ +YGEE + KI +AR
Sbjct: 112 ERGFSYHHDAPLDMRMDQSATLTAKEVVNDWRYEDLVRIFFKYGEEKFSKQIARKIEEAR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
++ + +TG+LVDLI+ P RR G A RVFQA+RIAVNDELK E +L +
Sbjct: 172 IKSPIQTTGQLVDLIKDAIPAP-ARRSGG-HPAKRVFQAIRIAVNDELKVFEEALEQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTF------------LSIIDHNREDAEGNEEELRNIRD 403
L PGGR+ VI+FHSLEDRI K TF L +I E E EL
Sbjct: 230 VLKPGGRVSVITFHSLEDRICKSTFKEKSSLPELPPGLPVI------PEEFEPEL----- 278
Query: 404 DNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PIT S EE N R RSAKLR+ +K
Sbjct: 279 -----------------KLITRKPITASQEELEENNRARSAKLRIAEK 309
>gi|428279108|ref|YP_005560843.1| S-adenosyl-methyltransferase MraW [Bacillus subtilis subsp. natto
BEST195]
gi|430756004|ref|YP_007209784.1| S-adenosyl-methyltransferase MraW [Bacillus subtilis subsp.
subtilis str. BSP1]
gi|291484065|dbj|BAI85140.1| S-adenosyl-methyltransferase MraW [Bacillus subtilis subsp. natto
BEST195]
gi|430020524|gb|AGA21130.1| S-adenosyl-methyltransferase MraW [Bacillus subtilis subsp.
subtilis str. BSP1]
Length = 311
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 137/348 (39%), Positives = 188/348 (54%), Gaps = 54/348 (15%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + + ++VDCTLG AGHS+ +++ E I D D +AL A+
Sbjct: 4 HKTVLLRETVDGLNI-KPDGTYVDCTLGGAGHSTYLLQQLSEKGRLIAFDQDDTALQHAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L+ GQ NFR++K L + + I + VD IL DLG+SS Q++ P
Sbjct: 63 EVLSDY-KGQ------LILIKSNFRYLKECLNE--QGI--TEVDGILFDLGVSSPQLDTP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD A+L A++++N W ++ R+ +YGEE + KI +AR
Sbjct: 112 ERGFSYHHDAPLDMRMDQSATLSAKEVVNEWRYEDLVRIFFKYGEEKFSKQIARKIEEAR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
++ + +TG+LVDLI+ P RR G A RVFQA+RIAVNDEL+ E +L +
Sbjct: 172 MKSPIQTTGQLVDLIKDAIPAP-ARRSGG-HPAKRVFQAIRIAVNDELRVFEEALEQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTF------------LSIIDHNREDAEGNEEELRNIRD 403
L PGGR+ VI+FHSLEDRI K TF L +I E E EL
Sbjct: 230 VLKPGGRVSVITFHSLEDRICKTTFKEKSSLPELPPGLPVI------PEEFEPEL----- 278
Query: 404 DNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PIT S EE N R RSAKLR+ +K
Sbjct: 279 -----------------KLITRKPITASQEELEENNRARSAKLRIAEK 309
>gi|321315277|ref|YP_004207564.1| 16S rRNA m(4)C1402 methyltransferase [Bacillus subtilis BSn5]
gi|320021551|gb|ADV96537.1| 16S rRNA m(4)C1402 methyltranserfase [Bacillus subtilis BSn5]
Length = 311
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 137/348 (39%), Positives = 188/348 (54%), Gaps = 54/348 (15%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + + ++VDCTLG AGHS+ +++ E I D D +AL A+
Sbjct: 4 HKTVLLRETVDGLNI-KPDGTYVDCTLGGAGHSTYLLQQLSEKGRLIAFDQDDTALQHAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L+ GQ NFR++K L + + I + VD IL DLG+SS Q++ P
Sbjct: 63 EVLSDY-KGQ------LILIKSNFRYLKECLNE--QGI--TEVDGILFDLGVSSPQLDTP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD A+L A++++N W ++ R+ +YGEE + KI +AR
Sbjct: 112 ERGFSYHHDAPLDMRMDQSATLTAKEVVNEWRYEDLVRIFFKYGEEKFSKQIARKIEEAR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
++ + +TG+LVDLI+ P RR G A RVFQA+RIAVNDEL+ E +L +
Sbjct: 172 MKSPIQTTGQLVDLIKDAIPAP-ARRSGG-HPAKRVFQAIRIAVNDELRVFEEALEQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTF------------LSIIDHNREDAEGNEEELRNIRD 403
L PGGR+ VI+FHSLEDRI K TF L +I E E EL
Sbjct: 230 VLKPGGRVSVITFHSLEDRICKTTFKEKSSLPELPPGLPVI------PEEFEPEL----- 278
Query: 404 DNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PIT S EE N R RSAKLR+ +K
Sbjct: 279 -----------------KLITRKPITASQEELEENNRARSAKLRIAEK 309
>gi|16078578|ref|NP_389397.1| S-adenosyl-methyltransferase [Bacillus subtilis subsp. subtilis
str. 168]
gi|221309385|ref|ZP_03591232.1| S-adenosyl-methyltransferase MraW [Bacillus subtilis subsp.
subtilis str. 168]
gi|221313712|ref|ZP_03595517.1| S-adenosyl-methyltransferase MraW [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221318634|ref|ZP_03599928.1| S-adenosyl-methyltransferase MraW [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221322908|ref|ZP_03604202.1| S-adenosyl-methyltransferase MraW [Bacillus subtilis subsp.
subtilis str. SMY]
gi|402775759|ref|YP_006629703.1| S-adenosyl-dependent methyltransferase [Bacillus subtilis QB928]
gi|452914709|ref|ZP_21963336.1| S-adenosyl-methyltransferase MraW [Bacillus subtilis MB73/2]
gi|1730600|sp|Q07876.2|RSMH_BACSU RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|1122760|emb|CAA92525.1| unknown [Bacillus subtilis subsp. subtilis str. 168]
gi|2633885|emb|CAB13387.1| S-adenosyl-dependent methyltransferase active on membrane-located
substrates [Bacillus subtilis subsp. subtilis str. 168]
gi|402480942|gb|AFQ57451.1| S-adenosyl-dependent methyltransferase active onmembrane-located
[Bacillus subtilis QB928]
gi|407958921|dbj|BAM52161.1| S-adenosyl-methyltransferase [Synechocystis sp. PCC 6803]
gi|407964498|dbj|BAM57737.1| S-adenosyl-methyltransferase [Bacillus subtilis BEST7003]
gi|452117129|gb|EME07524.1| S-adenosyl-methyltransferase MraW [Bacillus subtilis MB73/2]
Length = 311
Score = 207 bits (528), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 136/348 (39%), Positives = 188/348 (54%), Gaps = 54/348 (15%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + + ++VDCTLG AGHS+ +++ E I D D +AL A+
Sbjct: 4 HKTVLLRETVDGLNI-KPDGTYVDCTLGGAGHSTYLLQQLSEKGRLIAFDQDDTALQHAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L+ GQ NFR++K L + + + + VD IL DLG+SS Q++ P
Sbjct: 63 EVLSDY-KGQ------LILIKSNFRYLKEYLNE--QGV--TEVDGILFDLGVSSPQLDTP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD A+L A++++N W ++ R+ +YGEE + KI +AR
Sbjct: 112 ERGFSYHHDAPLDMRMDQSATLSAKEVVNEWRYEDLVRIFFKYGEEKFSKQIARKIEEAR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
++ + +TG+LVDLI+ P RR G A RVFQA+RIAVNDEL+ E +L +
Sbjct: 172 MKSPIQTTGQLVDLIKDAIPAP-ARRSGG-HPAKRVFQAIRIAVNDELRVFEEALEQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTF------------LSIIDHNREDAEGNEEELRNIRD 403
L PGGR+ VI+FHSLEDRI K TF L +I E E EL
Sbjct: 230 VLKPGGRVSVITFHSLEDRICKTTFKEKSSLPELPPGLPVI------PEEFEPEL----- 278
Query: 404 DNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PIT S EE N R RSAKLR+ +K
Sbjct: 279 -----------------KLITRKPITASQEELEENNRARSAKLRIAEK 309
>gi|157692188|ref|YP_001486650.1| S-adenosyl-methyltransferase MraW [Bacillus pumilus SAFR-032]
gi|263446003|sp|A8FCX3.1|RSMH_BACP2 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|157680946|gb|ABV62090.1| S-adenosyl-methyltransferase [Bacillus pumilus SAFR-032]
Length = 310
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 137/342 (40%), Positives = 183/342 (53%), Gaps = 42/342 (12%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + T +VDCTLG AGHSS ++ E IG D D +AL AR
Sbjct: 4 HETVLLKETVDGLNVKEDGT-YVDCTLGGAGHSSYLLSQLSEKGTLIGFDQDDAALDHAR 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L A NFR++K L + + I + VD ++ DLG+SS Q++ P
Sbjct: 63 EKL-------AGSKANILFIKSNFRYLKERLNE--QGI--TSVDGVIFDLGVSSPQLDTP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD A+L A+ ++N WP ++ R+ +YGEE + KI +AR
Sbjct: 112 ERGFSYHHDAPLDMRMDQSAALSAKKVVNEWPFEDLVRIFYKYGEEKFSKQIARKIEEAR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +TGELVD+I+ P RR G A RVFQA+RIAVNDELK E +L +
Sbjct: 172 KKAPIETTGELVDIIKEGIPAP-ARRTGG-HPAKRVFQAIRIAVNDELKVFEEALEQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTF-----LSIIDHNRE-DAEGNEEELRNIRDDNINET 409
L P GR+ VI+FHSLEDRI K TF L + H EG E +L
Sbjct: 230 LLNPKGRISVITFHSLEDRICKSTFREMSSLPELPHGLPVIPEGLEPKL----------- 278
Query: 410 WIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PI S +E N R RSAKLR+ +K
Sbjct: 279 -----------KLITRKPIVASEQELEHNNRARSAKLRIAEK 309
>gi|134298535|ref|YP_001112031.1| S-adenosyl-methyltransferase MraW [Desulfotomaculum reducens MI-1]
gi|263446306|sp|A4J2A3.1|RSMH_DESRM RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|134051235|gb|ABO49206.1| S-adenosyl-methyltransferase MraW [Desulfotomaculum reducens MI-1]
Length = 313
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 135/344 (39%), Positives = 191/344 (55%), Gaps = 44/344 (12%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIR-AHPELKLHIGVDVDPSALAKA 174
H+ V+L E +D + +VDCTLG AGHS I+R PE KL +G+D DP+A+A A
Sbjct: 5 HVSVLLHESIDGLKI-KPGGIYVDCTLGGAGHSLEILRRLGPEGKL-VGIDQDPAAIANA 62
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L GQ H +NF IK +L + S VD IL DLG+SS Q++
Sbjct: 63 AEKLQEF-PGQ------FHAVQRNFFQIKQIL----REMAISEVDGILFDLGVSSYQLDT 111
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
PERGFS + D LDMRM P ++ A++++N + E+ ++R YGE+ + + IV+
Sbjct: 112 PERGFSYMHDAELDMRMGPDQTISAKELVNDISEEELATIIRRYGEDRWAKRIASFIVKE 171
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +H+TGELVD+I++ P + RR+G A R FQALRIAVN+EL+ LE ++
Sbjct: 172 RKKRAIHTTGELVDIIKAAVP-VGARREGP-HPAKRTFQALRIAVNNELEILEQTMKDAV 229
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNRED------AEGNEEELRNIRDDNINE 408
L GGR+ VI+FHSLEDRI+K TF + + A G + ++
Sbjct: 230 TALKSGGRISVITFHSLEDRIIKDTFKELANPCTCPPAFPVCACGKQPQI---------- 279
Query: 409 TWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
KI+T +PI PS EE N R RSAKLR+ +K+
Sbjct: 280 ------------KIVTGKPIQPSKEELEHNPRARSAKLRIAEKL 311
>gi|386758234|ref|YP_006231450.1| S-adenosyl-methyltransferase MraW [Bacillus sp. JS]
gi|384931516|gb|AFI28194.1| S-adenosyl-methyltransferase MraW [Bacillus sp. JS]
Length = 311
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 137/348 (39%), Positives = 187/348 (53%), Gaps = 54/348 (15%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + + ++VDCTLG AGHS+ +++ E I D D AL A+
Sbjct: 4 HKTVLLRETVDGLNI-KPDGTYVDCTLGGAGHSTYLLQQLSEKGRLIAFDQDDMALQHAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L+ GQ NFR++K L + + I + VD IL DLG+SS Q++ P
Sbjct: 63 EALSDY-KGQ------LILIKSNFRYLKECLNE--QGI--TEVDGILFDLGVSSPQLDTP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD A+L A++++N W ++ R+ +YGEE + KI +AR
Sbjct: 112 ERGFSYHHDAPLDMRMDQSATLTAKEVVNEWRYEDLVRIFFKYGEEKFSKQIARKIEEAR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
++ + +TG+LVDLI+ P RR G A RVFQA+RIAVNDEL+ E +L +
Sbjct: 172 MKSPIQTTGQLVDLIKDAIPAP-ARRSGG-HPAKRVFQAIRIAVNDELRVFEEALEQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTF------------LSIIDHNREDAEGNEEELRNIRD 403
L PGGR+ VI+FHSLEDRI K TF L +I E E EL
Sbjct: 230 VLKPGGRVSVITFHSLEDRICKTTFKEKSSLPELPPGLPVI------PEEFEPEL----- 278
Query: 404 DNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PIT S EE N R RSAKLR+ +K
Sbjct: 279 -----------------KLITRKPITASQEELEENNRARSAKLRIAEK 309
>gi|421860355|ref|ZP_16292486.1| predicted S-adenosylmethionine-dependent methyltransferase
[Paenibacillus popilliae ATCC 14706]
gi|410830103|dbj|GAC42923.1| predicted S-adenosylmethionine-dependent methyltransferase
[Paenibacillus popilliae ATCC 14706]
Length = 316
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 146/342 (42%), Positives = 182/342 (53%), Gaps = 34/342 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+ E ++ + R +VDCTLG AGHS AI I +D D AL A
Sbjct: 4 HITVLKEEAVNGLNV-RPDGIYVDCTLGGAGHSFAIASLLSTDGRLIALDQDDWALDNAA 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGV---DAILMDLGMSSMQ 231
L P+L T K NFRHI+ L Q E L +GV D IL DLG+SS Q
Sbjct: 63 NVLA--------PYLDRVTMIKTNFRHIEDALYQA-EVPLANGVPQVDGILFDLGVSSPQ 113
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ ERGFS D PLDMRMD SL A +I+N WP+ E+ R+L EYGEE + +I
Sbjct: 114 LDEGERGFSYQHDAPLDMRMDRSHSLTAREIVNEWPEGEIARILFEYGEEKFSRRIARRI 173
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
+AR + +TGEL +L+++ P R G A R FQALRIAVNDEL E +LH
Sbjct: 174 AEARADHPIETTGELAELVKAGIPAATRRTGG--HPAKRSFQALRIAVNDELGAFEQALH 231
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
CL PGGR+ VI+FHSLEDRI KQTF + NR + + D +
Sbjct: 232 QATHCLKPGGRVAVITFHSLEDRICKQTFNQYM--NRCTCPPDLPMCACGKQDIL----- 284
Query: 412 RQIIQGWNGKILTKR-PITPSAEEERLNCRCRSAKLRVIQKI 452
IL KR PI PS EE N R RSA+LRV +K+
Sbjct: 285 ----------ILPKRKPIVPSVEELECNPRSRSARLRVAEKL 316
>gi|442805610|ref|YP_007373759.1| ribosomal RNA small subunit methyltransferase H [Clostridium
stercorarium subsp. stercorarium DSM 8532]
gi|442741460|gb|AGC69149.1| ribosomal RNA small subunit methyltransferase H [Clostridium
stercorarium subsp. stercorarium DSM 8532]
Length = 314
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 131/342 (38%), Positives = 192/342 (56%), Gaps = 31/342 (9%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
+ SH PV+L E ++ + R +VDCT+G AGHS+ I++ L IG+D D AL
Sbjct: 2 EFSHEPVLLKECIEGLNI-RPNGIYVDCTVGGAGHSAEILKRLGPKGLLIGIDQDREALE 60
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
A L + K +NF +I+ +L DE + + VD +L+DLG+SS Q+
Sbjct: 61 AAEEKLR-----KTESKAKFIIIHENFENIRQIL---DEKRI-NAVDGVLLDLGVSSYQI 111
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+RGF + D PLDMRM+ + A++++N+WP E+ R++REYGEE + I
Sbjct: 112 EAEKRGFRYMDDAPLDMRMNQDSEFTAKELVNTWPKDEIARIIREYGEEKWAARIAEFIC 171
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
+AR + +T +LVD+I++ P R++G A R FQA+RIAVN EL+ LE++L
Sbjct: 172 KARENQLIETTSQLVDIIKAAIPASARRKEGQ-HPAKRTFQAIRIAVNRELEVLENALPG 230
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETW-- 410
+ L GGRL VI+FHSLEDRIVKQ F N+ L D
Sbjct: 231 IVESLIRGGRLCVITFHSLEDRIVKQFF------------RNKSGLCKCPPDFPKCVCNP 278
Query: 411 IRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++Q+ KI+T++PI PS EE + N R RSAKLR+ +K+
Sbjct: 279 VKQL------KIITRKPIVPSEEELKRNHRARSAKLRIAEKL 314
>gi|339009175|ref|ZP_08641747.1| ribosomal RNA small subunit methyltransferase H [Brevibacillus
laterosporus LMG 15441]
gi|338773653|gb|EGP33184.1| ribosomal RNA small subunit methyltransferase H [Brevibacillus
laterosporus LMG 15441]
Length = 310
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 132/338 (39%), Positives = 184/338 (54%), Gaps = 34/338 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E ++ R +VDCTLG AGHS+ I + I +D D ALA A+
Sbjct: 4 HVTVLLQEAVEGLHI-RPDGIYVDCTLGGAGHSTLIASKLGDQGRLIAIDQDDVALANAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L + K NFR++K V+ +++ GVD +L DLG+SS Q++
Sbjct: 63 EKLQAY-------QDKVTLVKSNFRYLKDVV----QDLGLDGVDGVLFDLGVSSPQLDVE 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS GD PLDMRMD QA L A DI+N W +A + +++ EYGEE + +I+ R
Sbjct: 112 ERGFSYNGDAPLDMRMDQQADLSAYDIVNEWEEAALSKIIFEYGEEKFARKIARQIILHR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +TG+LV++I+ P RR G A R FQA+RIAVNDEL ++++ D
Sbjct: 172 EKAPIETTGQLVEIIKEAIPA-PARRTGP-HPAKRTFQAIRIAVNDELHVFKTAVSDAID 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L PGGR+ VI+FHSLEDRI K +L E A+G Q +
Sbjct: 230 ILRPGGRVSVITFHSLEDRICKHAYL-------EKAQG-----------CTCPPGFPQCV 271
Query: 416 QGWNG--KILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
G KI+T++P+ PS EE N R RSAKLR+ +K
Sbjct: 272 CGNEPIVKIITRKPLLPSEEELADNPRARSAKLRIAEK 309
>gi|421873576|ref|ZP_16305188.1| S-adenosyl-methyltransferase MraW [Brevibacillus laterosporus GI-9]
gi|372457363|emb|CCF14737.1| S-adenosyl-methyltransferase MraW [Brevibacillus laterosporus GI-9]
Length = 310
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 131/338 (38%), Positives = 184/338 (54%), Gaps = 34/338 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E ++ R +VDCTLG AGHS+ I + I +D D ALA A+
Sbjct: 4 HVTVLLQEAVEGLHI-RPDGIYVDCTLGGAGHSTLIASKLGDQGRLIAIDQDDVALANAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L + K NFR++K V+ +++ GVD +L DLG+SS Q++
Sbjct: 63 EKLQAY-------QDKVTLVKSNFRYLKDVV----QDLGLDGVDGVLFDLGVSSPQLDVE 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS GD PLDMRMD QA L A D++N W +A + +++ EYGEE + +I+ R
Sbjct: 112 ERGFSYNGDAPLDMRMDQQADLSAYDVVNEWEEAALSKIIFEYGEEKFARKIARQIILHR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +TG+LV++I+ P RR G A R FQA+RIAVNDEL ++++ D
Sbjct: 172 EKAPIETTGQLVEIIKEAIPAA-ARRTGP-HPAKRTFQAIRIAVNDELHVFKTAVSDAID 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L PGGR+ VI+FHSLEDRI K +L E A+G Q +
Sbjct: 230 ILRPGGRVSVITFHSLEDRICKHAYL-------EKAQG-----------CTCPPGFPQCV 271
Query: 416 QGWNG--KILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
G KI+T++P+ PS EE N R RSAKLR+ +K
Sbjct: 272 CGNEPIVKIITRKPLLPSEEELADNPRARSAKLRIAEK 309
>gi|329924124|ref|ZP_08279357.1| S-adenosyl-methyltransferase MraW [Paenibacillus sp. HGF5]
gi|328940856|gb|EGG37166.1| S-adenosyl-methyltransferase MraW [Paenibacillus sp. HGF5]
Length = 317
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 135/322 (41%), Positives = 170/322 (52%), Gaps = 34/322 (10%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
+VDCTLG AGHSS I I +D D AL AR + P+ T
Sbjct: 24 YVDCTLGGAGHSSLIASQLSSEGRLIALDQDDWALNNAREAMK--------PYADRITLV 75
Query: 197 K-NFRHIKSVLGQ---IDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMD 252
K NFR ++ VL EN + VD IL DLG+SS Q + ERGFS D PLDMRMD
Sbjct: 76 KTNFRDLEEVLRSEVGAGEN-GQPQVDGILFDLGVSSPQFDEGERGFSYNHDAPLDMRMD 134
Query: 253 PQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQS 312
A L A I+N WP+ E+ R+L +YGEE + IV+ R + + +TGELV++I+
Sbjct: 135 QSAELTAAKIVNEWPEQEIARILYQYGEEKFSRRIAKVIVERRAQSPIQTTGELVEMIKE 194
Query: 313 VTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLE 372
P RR G A R FQA RIAVNDEL E +LH CLAPGGR+ VI+FHSLE
Sbjct: 195 GIPAA-ARRTGG-HPAKRSFQAFRIAVNDELGAFEDALHQAVRCLAPGGRVSVITFHSLE 252
Query: 373 DRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNG--KILTKRPITP 430
DRI KQ F S I + + G G K++ ++P+ P
Sbjct: 253 DRICKQIFNSYIPKC-----------------TCPPDFPMCVCGGGQGDLKLVNRKPLIP 295
Query: 431 SAEEERLNCRCRSAKLRVIQKI 452
SAEE N R RSAKLR+ +K+
Sbjct: 296 SAEEIESNPRARSAKLRIAEKL 317
>gi|289522914|ref|ZP_06439768.1| S-adenosyl-methyltransferase MraW [Anaerobaculum hydrogeniformans
ATCC BAA-1850]
gi|289503938|gb|EFD25102.1| S-adenosyl-methyltransferase MraW [Anaerobaculum hydrogeniformans
ATCC BAA-1850]
Length = 300
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 136/338 (40%), Positives = 187/338 (55%), Gaps = 46/338 (13%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+PV+ E++++ S S + VD T+G GH+ A++ P++KL +G+D D +AL A
Sbjct: 6 HVPVLTNEIINILSLSDDLKLVVDATVGLGGHAYALLSTFPDIKL-LGLDQDETALEIAY 64
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRS-GVDAILMDLGMSSMQVNN 234
L G+ +K+ NFR I V+ +N RS VDAIL DLG+SS+Q+++
Sbjct: 65 ERLKPF--GERVLLVKS-----NFRFIDDVV----KNHFRSVAVDAILFDLGVSSLQIDD 113
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS GP+DMRMD +A + A DI+N++ ++ + +YGEE + IV+
Sbjct: 114 EERGFSFNKPGPIDMRMDREAKVTAFDIINNYCIKDLSDIFYKYGEERYSRQIAKAIVRY 173
Query: 295 RLRGGL-HSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
R + GL ST ELV++I+ P R+ G A RVFQALRI VNDEL LES L
Sbjct: 174 REQKGLIASTAELVEIIRRALPAKIQRQMGK-HPARRVFQALRIVVNDELGALESGLKNS 232
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
CL GG L VIS+HSLEDRIVK +F + W ++
Sbjct: 233 LGCLRSGGHLIVISYHSLEDRIVKHSF---------------------------KDWEKE 265
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
I GKI +K+PI P EE N R RSAKLRV+ K
Sbjct: 266 GI----GKIFSKKPILPKREEIEGNPRSRSAKLRVLIK 299
>gi|383764772|ref|YP_005443754.1| ribosomal RNA small subunit methyltransferase H [Caldilinea
aerophila DSM 14535 = NBRC 104270]
gi|381385040|dbj|BAM01857.1| ribosomal RNA small subunit methyltransferase H [Caldilinea
aerophila DSM 14535 = NBRC 104270]
Length = 328
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 141/345 (40%), Positives = 177/345 (51%), Gaps = 48/345 (13%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSA----- 170
H PV+L EVL + R +DCTLG GH+ AI+ A +G+D DP+A
Sbjct: 17 HAPVLLAEVLQGLAV-RPGAWVIDCTLGGGGHTEAILAASAPDGRVLGLDADPAAIRRVA 75
Query: 171 --LAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMS 228
LA A A +LH A L+ A F + VD IL+DLG+S
Sbjct: 76 ERLADAVASSRLVLHQGAFELLEEVAAAYGF----------------APVDGILLDLGVS 119
Query: 229 SMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQ 288
S Q+ PERGFS GPLDMR DP L A DI+N W + + V+ YGEE +
Sbjct: 120 SFQLQTPERGFSFGSAGPLDMRFDPGQPLSAADIVNEWDEQSLADVIYRYGEEPRSRRIA 179
Query: 289 NKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLES 348
+V+ R +T +L + I+ G RG R I ATR FQALRI VN EL+ LE+
Sbjct: 180 RYLVKHR---PFFTTAQLAEAIEKAVGGRRGAR---IHPATRTFQALRIVVNRELEQLEN 233
Query: 349 SLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNRED-AEGNEEELRNIRDDNIN 407
L L PGGRL VI+FHSLEDRIVK L+ R D AE N E R +
Sbjct: 234 VLPQALRLLRPGGRLAVITFHSLEDRIVKHWMLA---EARADVAEPNSMEGERQRQPTL- 289
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ILTK+PITP+AEE + N R RSAKLRV +K+
Sbjct: 290 -------------RILTKKPITPTAEEIQRNPRSRSAKLRVAEKL 321
>gi|261405657|ref|YP_003241898.1| S-adenosyl-methyltransferase MraW [Paenibacillus sp. Y412MC10]
gi|261282120|gb|ACX64091.1| S-adenosyl-methyltransferase MraW [Paenibacillus sp. Y412MC10]
Length = 317
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 134/322 (41%), Positives = 171/322 (53%), Gaps = 34/322 (10%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
+VDCTLG AGHSS I I +D D AL AR + P+ +
Sbjct: 24 YVDCTLGGAGHSSLIASQLSSEGRLIALDQDDWALNNAREAMK--------PYADRISLV 75
Query: 197 K-NFRHIKSVLGQ---IDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMD 252
K NFR ++ VL + EN + VD IL DLG+SS Q + ERGFS D PLDMRMD
Sbjct: 76 KTNFRDLEEVLRREVGAGEN-GQPQVDGILFDLGVSSPQFDEGERGFSYNHDAPLDMRMD 134
Query: 253 PQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQS 312
A L A I+N WP+ E+ R+L +YGEE + IV+ R + + +TGELV++I+
Sbjct: 135 QSAELTAAKIVNEWPEQEIARILYQYGEEKFSRRIAKVIVERRAQSPIQTTGELVEMIKE 194
Query: 313 VTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLE 372
P RR G A R FQA RIAVNDEL E +LH CLAPGGR+ VI+FHSLE
Sbjct: 195 GIPAA-ARRTGG-HPAKRSFQAFRIAVNDELGAFEDALHQAVRCLAPGGRISVITFHSLE 252
Query: 373 DRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNG--KILTKRPITP 430
DRI KQ F S I + + G G K++ ++P+ P
Sbjct: 253 DRICKQIFNSYIPKC-----------------TCPPDFPMCVCGGGQGDLKLVNRKPLIP 295
Query: 431 SAEEERLNCRCRSAKLRVIQKI 452
SAEE N R RSAKLR+ +K+
Sbjct: 296 SAEEIESNPRARSAKLRIAEKL 317
>gi|28211297|ref|NP_782241.1| S-adenosyl-methyltransferase MraW [Clostridium tetani E88]
gi|42559471|sp|Q894B4.1|RSMH_CLOTE RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|28203737|gb|AAO36178.1| S-adenosyl-methyltransferase mraW [Clostridium tetani E88]
Length = 310
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 127/337 (37%), Positives = 190/337 (56%), Gaps = 31/337 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+L E ++ + +VDCTLG AGHSS I++ + IG+D D AL A
Sbjct: 5 HISVLLDECIEGLNIKEN-GIYVDCTLGGAGHSSEILKNLSKEGKLIGIDQDEEALKAAS 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L + L H+ NF HIK +L +++ VD ILMDLG+SS Q++
Sbjct: 64 EKLK-----EYENVLYKHS---NFYHIKDILEELE----VGKVDGILMDLGVSSYQLDEK 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
RGFS + + PLDMRM+ ++SL A +++N + ++++ R++++YGEE + N IV++R
Sbjct: 112 SRGFSYMQNAPLDMRMNKKSSLDAYEVVNFYDESKLARIIKDYGEERFAKRISNFIVESR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +TGELVD+I+ P + RR+G A R FQA+RI VN EL+ L ++
Sbjct: 172 ENKKIETTGELVDIIKRAIPA-KFRREGP-HPAKRTFQAIRIEVNGELEILNKAIEDSVK 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L GGR+ +I+FHSLEDRIVK F + E+ +D I ++
Sbjct: 230 SLKSGGRIAIITFHSLEDRIVKNKFKEL-----------EDPCICPKDFPICTCGKEPLV 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
KI+T++PI PS EE +N R RSAKLR+ +K+
Sbjct: 279 -----KIITRKPIDPSKEEVEINPRSRSAKLRIAEKL 310
>gi|410583577|ref|ZP_11320683.1| S-adenosyl-methyltransferase MraW [Thermaerobacter subterraneus DSM
13965]
gi|410506397|gb|EKP95906.1| S-adenosyl-methyltransferase MraW [Thermaerobacter subterraneus DSM
13965]
Length = 383
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 136/340 (40%), Positives = 183/340 (53%), Gaps = 44/340 (12%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HIPV+L EVL R FVD T+GA GH++AI+ A E +G+D DP ALA A
Sbjct: 66 HIPVLLAEVLAYLQPERG-GRFVDGTVGAGGHAAAILEAAGEAGRLLGIDRDPQALALA- 123
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG---VDAILMDLGMSSMQV 232
+ F R + + ++ +G VD IL+DLG+SSMQ+
Sbjct: 124 -------------AARLAPFGDRVRLVHGDFRDLGRHLAAAGWKAVDGILLDLGVSSMQL 170
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
++P RGFS D PLDMRMDP + A D++N+ ++ R + EYGEE + + IV
Sbjct: 171 DDPARGFSYQVDAPLDMRMDPSQPVTAADLVNTASRDQLARWIAEYGEERWAGRIADFIV 230
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
AR R + +T +LV++I+ P R RR+G A R FQALRIAVN+EL+ LE+ L
Sbjct: 231 AARQRRPITTTLQLVEVIKDAVP-ARARRRGG-HPARRTFQALRIAVNNELEGLEAFLQE 288
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
L PGGRL VISFHSLEDR VK+ F ++ EG
Sbjct: 289 AAGYLRPGGRLVVISFHSLEDRAVKRAFRALAAPQVGGKEGAAF---------------- 332
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ILT+RP+TP EEER N R RSAKLR ++++
Sbjct: 333 --------RILTRRPVTPGDEEERRNPRARSAKLRALERV 364
>gi|253576122|ref|ZP_04853454.1| MraW methylase MraW [Paenibacillus sp. oral taxon 786 str. D14]
gi|251844465|gb|EES72481.1| MraW methylase MraW [Paenibacillus sp. oral taxon 786 str. D14]
Length = 324
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 131/322 (40%), Positives = 173/322 (53%), Gaps = 34/322 (10%)
Query: 137 FVDCTLGAAGHSSAII-RAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTF 195
+VDCTLG GHSS I+ + P +L I D D AL A+ L + K
Sbjct: 24 YVDCTLGGGGHSSVILSKLGPGGRL-IAFDQDDWALDNAKERLAAYAD-------KLTLV 75
Query: 196 AKNFRHIKSVLGQIDENILRSGV---DAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMD 252
NFR+I+ L +I+ +GV D +L DLG+SS Q + ERGFS D PLDMRMD
Sbjct: 76 KSNFRYIEQKLREIEGVPQLNGVPQVDGVLFDLGVSSPQFDEGERGFSYNADAPLDMRMD 135
Query: 253 PQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQS 312
A+L A +I+N+WP+ E+ R+L +YGEE + I R + + +TG+LV+LI+
Sbjct: 136 QSAALTAREIVNTWPEREIARILFQYGEEKFSRWIAKVIADRRAQEPIETTGQLVELIKE 195
Query: 313 VTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLE 372
P R G A R FQALRIAVNDEL E LHA CLAP GR+ VI+FHSLE
Sbjct: 196 GIPAAARRTGG--HPAKRSFQALRIAVNDELGAFEEGLHAAIRCLAPEGRVSVITFHSLE 253
Query: 373 DRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNG--KILTKRPITP 430
DRI KQ F S ++ + + G G K++ ++PI P
Sbjct: 254 DRICKQIFASYVEKCTCPPD------------------FPMCVCGGKGSLKLINRKPIVP 295
Query: 431 SAEEERLNCRCRSAKLRVIQKI 452
S +E N R RSAKLRV +K+
Sbjct: 296 SEQELADNPRARSAKLRVAEKL 317
>gi|52080116|ref|YP_078907.1| S-adenosyl-methyltransferase MraW [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|319646109|ref|ZP_08000339.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
sp. BT1B_CT2]
gi|404489005|ref|YP_006713111.1| 16S rRNA m(4)C1402 methyltransferase [Bacillus licheniformis DSM 13
= ATCC 14580]
gi|59799852|sp|Q65JY8.1|RSMH_BACLD RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|52003327|gb|AAU23269.1| putative methyltransferase [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|52347992|gb|AAU40626.1| S-adenosyl-L-methionine-dependent methyltransferase MraW [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|317391859|gb|EFV72656.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
sp. BT1B_CT2]
Length = 312
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 132/337 (39%), Positives = 185/337 (54%), Gaps = 32/337 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + T +VDCTLG AGHS ++ E + D D +AL A+
Sbjct: 4 HTTVLLKETVDGLNVKEDGT-YVDCTLGGAGHSEYLLSQLSEKGKLVAFDQDETALRHAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L GQ F K NFR++K L +I + VD +L DLG+SS Q++
Sbjct: 63 EKLADY-EGQV-------VFIKSNFRYLKDRLNEIG----ITKVDGVLFDLGVSSPQLDT 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
PERGFS D PLDMRMD A L A++++N WP ++ ++ +YGEE + KI +A
Sbjct: 111 PERGFSYHHDAPLDMRMDQSAGLSAKEVVNEWPYEDLVKIFFKYGEEKFSKQIARKIEKA 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + + +TG+LVD+I+ P RR G A R+FQA+RIAVNDEL+ E +L
Sbjct: 171 REQSPIETTGQLVDIIKEAIPAP-ARRSGG-HPAKRIFQAIRIAVNDELRVFEEALLQAI 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
+ L PGGR+ VI+FHSLEDRI K TF +D E + I + + ++
Sbjct: 229 EVLKPGGRVSVITFHSLEDRICKSTF--------KDMSSPPELPHGL--PVIPKEFEPKL 278
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++ ++PIT S EE N R RSAKLR+ +K
Sbjct: 279 ------KLVNRKPITASEEELEHNNRARSAKLRIAEK 309
>gi|311068034|ref|YP_003972957.1| S-adenosyl-methyltransferase MraW [Bacillus atrophaeus 1942]
gi|310868551|gb|ADP32026.1| S-adenosyl-methyltransferase MraW [Bacillus atrophaeus 1942]
Length = 311
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 132/336 (39%), Positives = 186/336 (55%), Gaps = 30/336 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + ++VDCTLG AGHS+ +++ E I D D +AL A+
Sbjct: 4 HKTVLLRETVDGLDI-KPDGTYVDCTLGGAGHSTYLLQQLSEKGRLIAFDQDDTALQHAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L+ GQ NFR++K L + + I + +D +L DLG+SS Q++ P
Sbjct: 63 EKLSGY-KGQ------LILIKSNFRYLKDCLNE--QGI--TEIDGVLFDLGVSSPQLDTP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD A L A++++N W ++ R+ YGEE + KI +AR
Sbjct: 112 ERGFSYHHDAPLDMRMDQSAPLTAKEVVNEWRYEDLVRIFFRYGEEKFSKQIARKIEEAR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +TG+LVDLI+ P RR G A RVFQA+RIAVNDELK E +L +
Sbjct: 172 SKSPIQTTGQLVDLIKDAIPAP-ARRSGG-HPAKRVFQAIRIAVNDELKVFEEALLQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L PGGR+ VI+FHSLEDRI K TF +E+ ++ + I +
Sbjct: 230 VLKPGGRVSVITFHSLEDRICKATF---------------KEMSSLPELPPGLPVIPEEF 274
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ K++T++PIT S EE N R RSAKLR+ +K
Sbjct: 275 EP-ELKLITRKPITASEEELEENNRARSAKLRIAEK 309
>gi|258514333|ref|YP_003190555.1| S-adenosyl-methyltransferase MraW [Desulfotomaculum acetoxidans DSM
771]
gi|257778038|gb|ACV61932.1| S-adenosyl-methyltransferase MraW [Desulfotomaculum acetoxidans DSM
771]
Length = 311
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 135/344 (39%), Positives = 186/344 (54%), Gaps = 42/344 (12%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
SH PVML EV+D + R +VDCTLG AGHSSAI + L IG+D DP ALA A
Sbjct: 4 SHKPVMLAEVIDGLNI-RPGGIYVDCTLGGAGHSSAIAQKLDGRGLLIGLDQDPEALAAA 62
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L ++G T +NF I SVL + NI VD IL DLG+SS Q++N
Sbjct: 63 SERLA--VYGAL-----VKTVGRNFSEIASVLSSL--NI--ESVDGILYDLGVSSYQLDN 111
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
P RGFS + + PLDMRM+PQ+ + A D++NS ++ +++ YGEE + I++
Sbjct: 112 PSRGFSYMHEAPLDMRMNPQSGITAGDLVNSLSQEKLAEIIQSYGEERWASRIAGFIIEE 171
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +TG+LV +I+ P G R+ A R FQALRIAVN EL+ L+ +L
Sbjct: 172 RRHKNICTTGQLVQIIKKAIPA--GARRDGPHPAKRTFQALRIAVNRELEILQQALRDGI 229
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAE------GNEEELRNIRDDNINE 408
L GGR+ VI+FHSLEDR+VK+ F S+ G ++EL
Sbjct: 230 KFLRTGGRICVITFHSLEDRLVKEVFKSVAKGCICPPRLPVCLCGKQKEL---------- 279
Query: 409 TWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
KI+T +P+ P+ E + N R RSAKLR+ ++
Sbjct: 280 ------------KIITGKPLVPTETELKDNPRARSAKLRIAERF 311
>gi|138894646|ref|YP_001125099.1| S-adenosyl-methyltransferase MraW [Geobacillus thermodenitrificans
NG80-2]
gi|196247745|ref|ZP_03146447.1| S-adenosyl-methyltransferase MraW [Geobacillus sp. G11MC16]
gi|263455979|sp|A4IM00.1|RSMH_GEOTN RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|134266159|gb|ABO66354.1| S-adenosyl-methyltransferase MraW [Geobacillus thermodenitrificans
NG80-2]
gi|196212529|gb|EDY07286.1| S-adenosyl-methyltransferase MraW [Geobacillus sp. G11MC16]
Length = 310
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 131/336 (38%), Positives = 180/336 (53%), Gaps = 30/336 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + R +VDCTLG GHS ++ + D D +A+ A
Sbjct: 4 HTTVLLKEAVDGLNV-RPDGVYVDCTLGGGGHSEYLLSRLSKRGKLFAFDQDETAILHAS 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L A + +NFR ++ L + + VD IL DLG+SS Q++ P
Sbjct: 63 ERL-------ARYREQVQFINRNFRFLQEELSALGIH----AVDGILFDLGVSSPQLDEP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD + L A +I+N WP E+ R+ YGEE + KI + R
Sbjct: 112 ERGFSYQHDAPLDMRMDRKQRLTAAEIVNRWPYEELVRIFFRYGEEKFSKQVARKIEEVR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +TGELV++I++ P RR G A R+FQALRIAVNDEL+ +L +
Sbjct: 172 RKRPIETTGELVEVIKAAIPAP-ARRSGG-HPAKRIFQALRIAVNDELEAFREALEQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
LAPGGR+ VI+FHSLEDRI K+TF ++ L + DD R ++
Sbjct: 230 LLAPGGRVSVITFHSLEDRICKETF-----KKASESPPLPPGLPVLPDD------YRPVL 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
KI+TK+P+ PSAEE N R RSAKLR+ +K
Sbjct: 279 -----KIITKKPVVPSAEELERNNRARSAKLRIAEK 309
>gi|423682054|ref|ZP_17656893.1| S-adenosyl-methyltransferase MraW [Bacillus licheniformis WX-02]
gi|383438828|gb|EID46603.1| S-adenosyl-methyltransferase MraW [Bacillus licheniformis WX-02]
Length = 334
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 132/342 (38%), Positives = 187/342 (54%), Gaps = 32/342 (9%)
Query: 111 QQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSA 170
++ H V+L E +D + T +VDCTLG AGHS ++ E + D D +A
Sbjct: 21 KEMFEHTTVLLKETVDGLNVKEDGT-YVDCTLGGAGHSEYLLSQLSEKGKLVAFDQDETA 79
Query: 171 LAKARAHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSS 229
L A+ L GQ F K NFR++K L +I + VD +L DLG+SS
Sbjct: 80 LRHAKEKLADY-EGQV-------VFIKSNFRYLKDRLNEIG----ITKVDGVLFDLGVSS 127
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
Q++ PERGFS D PLDMRMD A L A++++N WP ++ ++ +YGEE +
Sbjct: 128 PQLDTPERGFSYHHDAPLDMRMDQSAGLSAKEVVNEWPYEDLVKIFFKYGEEKFSKQIAR 187
Query: 290 KIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESS 349
KI +AR + + +TG+LVD+I+ P RR G A R+FQA+RIAVNDEL+ E +
Sbjct: 188 KIEKAREQSPIETTGQLVDIIKEAIPAP-ARRSGG-HPAKRIFQAIRIAVNDELRVFEEA 245
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINET 409
L + L PGGR+ VI+FHSLEDRI K TF +D E + I +
Sbjct: 246 LLQAIEVLKPGGRVSVITFHSLEDRICKSTF--------KDMSSPPELPHGL--PVIPKE 295
Query: 410 WIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ ++ K++ ++PIT S EE N R RSAKLR+ +K
Sbjct: 296 FEPKL------KLVNRKPITASEEELEHNNRARSAKLRIAEK 331
>gi|398310615|ref|ZP_10514089.1| 16S rRNA m(4)C1402 methyltransferase [Bacillus mojavensis RO-H-1]
Length = 311
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 136/338 (40%), Positives = 185/338 (54%), Gaps = 34/338 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + + ++VDCTLG AGHS+ +++ E I D D +AL A
Sbjct: 4 HKTVLLRETVDGLNI-KPDGTYVDCTLGGAGHSTYLLQQLSEKGRLIAFDQDDTALQHAE 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQ--IDENILRSGVDAILMDLGMSSMQVN 233
L+ GQ NFR++K L + I E VD IL DLG+SS Q++
Sbjct: 63 EALSDY-QGQ------LILIKSNFRYLKECLHEHGITE------VDGILFDLGVSSPQLD 109
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
PERGFS D PLDMRMD A+L A++++N W ++ R+ +YGEE + KI +
Sbjct: 110 TPERGFSYHHDAPLDMRMDQSATLTAKEVVNEWRYEDLVRIFFKYGEEKFSKQIARKIEE 169
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + + +TG+LVDLI+ P RR G A RVFQA+RIAVNDELK E +L
Sbjct: 170 ARSKSPIQTTGQLVDLIKDAIPAP-ARRSGG-HPAKRVFQAIRIAVNDELKVFEEALEQA 227
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
L PGGR+ VI+FHSLEDRI K TF +E ++ D I +
Sbjct: 228 IYVLKPGGRVSVITFHSLEDRICKSTF---------------KEKSSLPDLPPGLPVIPE 272
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ K++T++PIT S EE N R RSAKLR+ +K
Sbjct: 273 EFEP-ELKLITRKPITASEEELAENNRARSAKLRIAEK 309
>gi|398304268|ref|ZP_10507854.1| 16S rRNA m(4)C1402 methyltransferase [Bacillus vallismortis
DV1-F-3]
Length = 311
Score = 204 bits (519), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 136/348 (39%), Positives = 187/348 (53%), Gaps = 54/348 (15%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + + ++VDCTLG AGHS+ +++ E I D D +AL A+
Sbjct: 4 HKTVLLRETVDGLNI-KPDGTYVDCTLGGAGHSTYLLQQLSEKGRLIAFDQDDTALQHAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L++ GQ NFR++K L + + I + VD IL DLG+SS Q++ P
Sbjct: 63 ETLSNY-KGQ------LILIKSNFRYLKECLNE--QGI--TEVDGILFDLGVSSPQLDTP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD A+L A++++N W ++ R+ +YGEE + KI +AR
Sbjct: 112 ERGFSYHHDAPLDMRMDQSATLTAKEVVNEWRYEDLVRIFFKYGEEKFSKQIARKIEEAR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
++ + +TG+LVDLI+ P RR G A RVFQA+RIAVNDELK E +L +
Sbjct: 172 IKSPIQTTGQLVDLIKDAIPAP-ARRSGG-HPAKRVFQAIRIAVNDELKVFEEALEQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTF------------LSIIDHNREDAEGNEEELRNIRD 403
L P GR+ VI+FHSLEDRI K TF L +I E EL
Sbjct: 230 VLKPEGRVSVITFHSLEDRICKTTFKEKSSLPELPPGLPVIPAE------FEPEL----- 278
Query: 404 DNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PIT S EE N R RSAKLR+ +K
Sbjct: 279 -----------------KLITRKPITASQEELEENNRARSAKLRIAEK 309
>gi|317489854|ref|ZP_07948347.1| MraW methylase [Eggerthella sp. 1_3_56FAA]
gi|316911009|gb|EFV32625.1| MraW methylase [Eggerthella sp. 1_3_56FAA]
Length = 318
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 136/345 (39%), Positives = 187/345 (54%), Gaps = 43/345 (12%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H PV+L E L+ +S+ + +FVD TLG AGHS + IG+D D ALA AR
Sbjct: 7 HTPVLLAECLE-YSNLKPQHTFVDATLGGAGHSFEAAKLIGSGGTLIGIDQDEVALAAAR 65
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRS---GVDAILMDLGMSSMQV 232
L +L P L+ ++ G +DE +L + GVDA+L DLG+SS+Q+
Sbjct: 66 LKLGTL-PDDVRPRLEL---------VRGNFGNMDEALLSTEVPGVDAVLFDLGVSSVQI 115
Query: 233 NNPERGFSVLGDGPLDMRMDP-QASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
+ P RGFS +GPLDMRMDP + +L A +I+N++ A++ R++R Y +E + +
Sbjct: 116 DTPSRGFSFKENGPLDMRMDPGKQTLTAAEIINTYTAADLTRIIRTYSDEKWASRIADFA 175
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
V+AR + ++ +LVD+I++ P RR G A R FQALRI VN EL L S L
Sbjct: 176 VRARQNAPIETSEQLVDIIKAAIPA-SARRAGG-HPAKRTFQALRIEVNGELDVLRSGLD 233
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
A L PGGRL VIS+HSLEDRIVK+TF + T
Sbjct: 234 AAIRWLNPGGRLVVISYHSLEDRIVKETFAKFANRC---------------------TCP 272
Query: 412 RQIIQGWNGK-----ILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ GK I+T++P+ P+AEE N R RSAKLRV QK
Sbjct: 273 PDLPACMCGKQPILDIVTRKPVLPTAEEIERNARARSAKLRVAQK 317
>gi|325829899|ref|ZP_08163357.1| S-adenosyl-methyltransferase MraW [Eggerthella sp. HGA1]
gi|325488066|gb|EGC90503.1| S-adenosyl-methyltransferase MraW [Eggerthella sp. HGA1]
Length = 318
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 137/340 (40%), Positives = 189/340 (55%), Gaps = 33/340 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H PV+L E L+ +S+ + +FVD TLG AGHS + IG+D D ALA AR
Sbjct: 7 HTPVLLAECLE-YSNLKPQHTFVDATLGGAGHSFEAAKLIGSGGTLIGIDQDEVALAAAR 65
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRS---GVDAILMDLGMSSMQV 232
L +L P L+ ++ G +DE +L + GVDA+L DLG+SS+Q+
Sbjct: 66 LKLGTL-PDDVRPRLEL---------VRGNFGNMDEALLSTEVPGVDAVLFDLGVSSVQI 115
Query: 233 NNPERGFSVLGDGPLDMRMDP-QASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
+ P RGFS +GPLDMRMDP + +L A +I+N++ A++ R++R Y +E + +
Sbjct: 116 DTPSRGFSFKENGPLDMRMDPGKQTLTAAEIINTYTAADLTRIIRTYSDEKWASRIADFA 175
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
V+AR + ++ +LVD+I++ P RR G A R FQALRI VN EL L S L
Sbjct: 176 VRARQNAPIETSEQLVDIIKAAIPA-SARRAGG-HPAKRTFQALRIEVNGELDVLRSGLD 233
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
A L PGGRL VIS+HSLEDRIVK+TF NR D +
Sbjct: 234 AAIRWLNPGGRLVVISYHSLEDRIVKETFAKF--ANRCTCPP---------DLPVCMCGK 282
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ I+ I+T++P+ P+AEE N R RSAKLRV QK
Sbjct: 283 QPILD-----IVTRKPVLPTAEEIERNARARSAKLRVAQK 317
>gi|257791849|ref|YP_003182455.1| S-adenosyl-methyltransferase MraW [Eggerthella lenta DSM 2243]
gi|257475746|gb|ACV56066.1| S-adenosyl-methyltransferase MraW [Eggerthella lenta DSM 2243]
Length = 318
Score = 204 bits (518), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 137/340 (40%), Positives = 189/340 (55%), Gaps = 33/340 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H PV+L E L+ +S+ + +FVD TLG AGHS + IG+D D ALA AR
Sbjct: 7 HTPVLLAECLE-YSNLKPQHTFVDATLGGAGHSFEAAKLIGSGGTLIGIDQDEVALAAAR 65
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRS---GVDAILMDLGMSSMQV 232
L +L P L+ ++ G +DE +L + GVDA+L DLG+SS+Q+
Sbjct: 66 RKLGTL-PDDVRPRLEL---------VRGNFGNMDEALLSTEVPGVDAVLFDLGVSSVQI 115
Query: 233 NNPERGFSVLGDGPLDMRMDP-QASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
+ P RGFS +GPLDMRMDP + +L A +I+N++ A++ R++R Y +E + +
Sbjct: 116 DTPSRGFSFKENGPLDMRMDPGKQTLTAAEIINTYTAADLTRIIRTYSDEKWASRIADFA 175
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
V+AR + ++ +LVD+I++ P RR G A R FQALRI VN EL L S L
Sbjct: 176 VRARQTAPIETSEQLVDIIKAAIPA-SARRAGG-HPAKRTFQALRIEVNGELDVLRSGLD 233
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
A L PGGRL VIS+HSLEDRIVK+TF NR D +
Sbjct: 234 AAIRWLNPGGRLVVISYHSLEDRIVKETFAKF--ANRCTCPP---------DLPVCMCGK 282
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ I+ I+T++P+ P+AEE N R RSAKLRV QK
Sbjct: 283 QPILD-----IVTRKPVLPTAEEIERNARARSAKLRVAQK 317
>gi|423669493|ref|ZP_17644522.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
VDM034]
gi|401298620|gb|EJS04220.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
VDM034]
Length = 310
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 132/336 (39%), Positives = 179/336 (53%), Gaps = 30/336 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D + T +VDCTLG GHSS ++ + I D D A+ A+
Sbjct: 4 HVTVLLKETVDGLDIKPSGT-YVDCTLGGGGHSSYLLSQLTDGGKLIAFDQDEIAIQNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
+S +G+ +K+ NFR++ L ++ + VD IL DLG+SS Q++ P
Sbjct: 63 GKFSS--YGEQFVTVKS-----NFRYLSEKLHELG----ITEVDGILFDLGVSSPQLDTP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD A L A D++NSW ++ R+ +YGEE + KI R
Sbjct: 112 ERGFSYHHDAPLDMRMDQDAPLTAYDVVNSWSYEQLVRIFFQYGEEKFSKQITRKIEAYR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +TGELV+LI+ P RR G A RVFQA+RIAVNDELK E +L + D
Sbjct: 172 ENKAIETTGELVELIKEGIPA-PARRTGG-HPAKRVFQAIRIAVNDELKVFEEALESAID 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
+ PGGR+ VI+FHSLEDRI K TF R + I D
Sbjct: 230 MVKPGGRVSVITFHSLEDRICKTTF------KRNSTTPQLPQGLPIIPDEFKPKL----- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PI PS E N R RSAKLR+ +K
Sbjct: 279 -----KLITRKPILPSDIELEENNRARSAKLRIAEK 309
>gi|387898091|ref|YP_006328387.1| S-adenosyl-methyltransferase [Bacillus amyloliquefaciens Y2]
gi|387172201|gb|AFJ61662.1| S-adenosyl-methyltransferase [Bacillus amyloliquefaciens Y2]
Length = 316
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 138/352 (39%), Positives = 187/352 (53%), Gaps = 54/352 (15%)
Query: 112 QQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
Q H V+L E +D + + ++VDCTLG AGHS+ +++ E I D D +AL
Sbjct: 5 QMFQHKTVLLRETVDGLNI-KPDGTYVDCTLGGAGHSTYLLQQLSEKGRLIAFDQDDTAL 63
Query: 172 AKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQ 231
A+ L S GQ NFR++K L + I + VD IL DLG+SS Q
Sbjct: 64 ENAKKTL-SEYKGQ------LILVKSNFRYLKECLHE--HGI--TSVDGILFDLGVSSPQ 112
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ PERGFS D PLDMRMD A+L A++++N W ++ R+ +YGEE + KI
Sbjct: 113 LDTPERGFSYHHDAPLDMRMDQSAALTAKEVVNEWRYEDLVRIFFKYGEEKFSKQIARKI 172
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
+AR + + +TG+LVDLI+ P RR G A RVFQA+RIAVNDEL+ E +L
Sbjct: 173 EEAREKSPIQTTGQLVDLIKDAIPAP-ARRSGG-HPAKRVFQAIRIAVNDELQVFEEALL 230
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTF------------LSIIDHNREDAEGNEEELR 399
+ L PGGR+ VI+FHSLEDR+ K TF L +I E E EL
Sbjct: 231 QAIEVLKPGGRVSVITFHSLEDRMCKTTFKEKSSLPELPPGLPVI------PEEFEPEL- 283
Query: 400 NIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PIT S EE N R RSAKLR+ +K
Sbjct: 284 ---------------------KLITRKPITASKEELEENNRARSAKLRIAEK 314
>gi|323701280|ref|ZP_08112955.1| S-adenosyl-methyltransferase MraW [Desulfotomaculum nigrificans DSM
574]
gi|333924517|ref|YP_004498097.1| ribosomal RNA small subunit methyltransferase H [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|323533882|gb|EGB23746.1| S-adenosyl-methyltransferase MraW [Desulfotomaculum nigrificans DSM
574]
gi|333750078|gb|AEF95185.1| Ribosomal RNA small subunit methyltransferase H [Desulfotomaculum
carboxydivorans CO-1-SRB]
Length = 311
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 131/338 (38%), Positives = 187/338 (55%), Gaps = 32/338 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+L E ++ + + +VDCTLG AGHS+ I+R IG+D DP+A+A A
Sbjct: 5 HISVLLKESINGLNINPQ-GIYVDCTLGGAGHSTEILRRLGPGGRLIGLDQDPAAIANAE 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L + NF IK VL ++ S VD +L DLG+SS Q++ P
Sbjct: 64 QRLQRFAG-------RFQAVRANFVGIKQVLAELG----ISTVDGVLFDLGVSSYQLDTP 112
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS + D LDMRMDP A++++N P+ E+ ++R+YGEE + + IV+ R
Sbjct: 113 ERGFSYMHDAELDMRMDPDQPTSAKELVNDLPEEELTNIIRKYGEERWAKRIASFIVRER 172
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
R + +TG+LV++I++ P RR+G A R FQALRIAVN+EL L+ ++
Sbjct: 173 QRRPITTTGQLVEIIKAAVPA-NARREGP-HPAKRTFQALRIAVNNELGILKGAIQGAVQ 230
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETW-IRQI 414
L PGGR+ VI+FHSLEDRI+K TF +EL N ++ +
Sbjct: 231 VLKPGGRICVITFHSLEDRIIKDTF---------------KELAN--PCTCPPSFPVCNC 273
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ KI+T +PI P AEE N R RSAKLR+ +K+
Sbjct: 274 GKQPQVKIITNKPIEPGAEELAYNPRARSAKLRIAEKL 311
>gi|163941658|ref|YP_001646542.1| S-adenosyl-methyltransferase MraW [Bacillus weihenstephanensis
KBAB4]
gi|229061524|ref|ZP_04198868.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus AH603]
gi|229168659|ref|ZP_04296381.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus AH621]
gi|423367963|ref|ZP_17345395.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
VD142]
gi|423483509|ref|ZP_17460199.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
BAG6X1-2]
gi|423489095|ref|ZP_17465777.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
BtB2-4]
gi|423494820|ref|ZP_17471464.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
CER057]
gi|423498388|ref|ZP_17475005.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
CER074]
gi|423511953|ref|ZP_17488484.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
HuA2-1]
gi|423518610|ref|ZP_17495091.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
HuA2-4]
gi|423522250|ref|ZP_17498723.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
HuA4-10]
gi|423592085|ref|ZP_17568116.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
VD048]
gi|423598770|ref|ZP_17574770.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
VD078]
gi|423661242|ref|ZP_17636411.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
VDM022]
gi|423674328|ref|ZP_17649267.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
VDM062]
gi|263447259|sp|A9VU80.1|RSMH_BACWK RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|163863855|gb|ABY44914.1| S-adenosyl-methyltransferase MraW [Bacillus weihenstephanensis
KBAB4]
gi|228614815|gb|EEK71918.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus AH621]
gi|228717758|gb|EEL69408.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus AH603]
gi|401082824|gb|EJP91089.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
VD142]
gi|401141060|gb|EJQ48615.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
BAG6X1-2]
gi|401150913|gb|EJQ58365.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
CER057]
gi|401160437|gb|EJQ67815.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
CER074]
gi|401160818|gb|EJQ68193.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
HuA2-4]
gi|401175999|gb|EJQ83198.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
HuA4-10]
gi|401232218|gb|EJR38720.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
VD048]
gi|401237040|gb|EJR43497.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
VD078]
gi|401301283|gb|EJS06872.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
VDM022]
gi|401309879|gb|EJS15212.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
VDM062]
gi|402432343|gb|EJV64402.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
BtB2-4]
gi|402450214|gb|EJV82048.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
HuA2-1]
Length = 310
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 132/336 (39%), Positives = 179/336 (53%), Gaps = 30/336 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D + T +VDCTLG GHSS ++ + I D D A+ A+
Sbjct: 4 HVTVLLKETVDGLDIKPSGT-YVDCTLGGGGHSSYLLSQLTDGGKLIAFDQDEIAIQNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
+S +G+ +K+ NFR++ L ++ + VD IL DLG+SS Q++ P
Sbjct: 63 EKFSS--YGEQFVTVKS-----NFRYLSEKLHELG----ITEVDGILFDLGVSSPQLDTP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD A L A D++NSW ++ R+ +YGEE + KI R
Sbjct: 112 ERGFSYHHDAPLDMRMDQDAPLTAYDVVNSWSYEQLVRIFFQYGEEKFSKQITRKIEAYR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +TGELV+LI+ P RR G A RVFQA+RIAVNDELK E +L + D
Sbjct: 172 ENKAIETTGELVELIKEGIPA-PARRTGG-HPAKRVFQAIRIAVNDELKVFEEALESAID 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
+ PGGR+ VI+FHSLEDRI K TF R + I D
Sbjct: 230 MVKPGGRVSVITFHSLEDRICKTTF------KRNSTTPQLPQGLPIIPDEFKPKL----- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PI PS E N R RSAKLR+ +K
Sbjct: 279 -----KLITRKPILPSDIELEENNRARSAKLRIAEK 309
>gi|304404001|ref|ZP_07385663.1| S-adenosyl-methyltransferase MraW [Paenibacillus curdlanolyticus
YK9]
gi|304346979|gb|EFM12811.1| S-adenosyl-methyltransferase MraW [Paenibacillus curdlanolyticus
YK9]
Length = 317
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 135/342 (39%), Positives = 179/342 (52%), Gaps = 33/342 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V++ E +D + + +VDCTLG AGHSS I+ I D D A AR
Sbjct: 4 HVTVLMEEAIDGLAV-KPDGIYVDCTLGGAGHSSGIVSRLGGGGRLIAFDQDDWAHDNAR 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG---VDAILMDLGMSSMQV 232
L S + K NFR+++ L + + + G VD IL DLG+SS Q+
Sbjct: 63 IRLASSMD-------KVTLIKSNFRYLEQRLLECEGVPQKDGIPQVDGILFDLGVSSPQL 115
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ ERGFS D PLDMRMD +L A DI+N+W + ++ R+L EYGEE + +I
Sbjct: 116 DEAERGFSYNHDAPLDMRMDRDIALTAGDIVNTWDERDIARILMEYGEEKFARKIAREIG 175
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
AR + +TGELV+LI++ P RR G A R FQALRIAVNDEL E +L
Sbjct: 176 AARANAPIETTGELVELIKAGIPAA-ARRTGG-HPAKRTFQALRIAVNDELDAEEDALEQ 233
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
CL PGGR VI+FHSLEDRI KQTF ++ +
Sbjct: 234 AIRCLKPGGRASVITFHSLEDRICKQTFAKYLEKCSCPPD------------------FP 275
Query: 413 QIIQGWNG--KILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ G G K++ ++PI PS EE N R RSAKLRV +K+
Sbjct: 276 LCVCGGQGALKLVNRKPIVPSEEELEANPRARSAKLRVAEKL 317
>gi|147678204|ref|YP_001212419.1| S-adenosyl-methyltransferase MraW [Pelotomaculum thermopropionicum
SI]
gi|262824781|sp|A5D113.1|RSMH_PELTS RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|146274301|dbj|BAF60050.1| predicted S-adenosylmethionine-dependent methyltransferase
[Pelotomaculum thermopropionicum SI]
Length = 311
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 136/344 (39%), Positives = 188/344 (54%), Gaps = 44/344 (12%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAII-RAHPELKLHIGVDVDPSALAKA 174
H PVML EVL+ + + +VDCT+G AGH AI+ R E +L IG+D DP ALA A
Sbjct: 5 HRPVMLDEVLEGLNL-KPGGVYVDCTVGGAGHGEAILKRTGAEGRL-IGIDRDPEALAAA 62
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L + +G+ + NF I VL E + ++GVD IL DLG+SS Q++N
Sbjct: 63 ERRL--VPYGK-----RVDLVRANFEDIGKVL----ERLGQTGVDGILFDLGVSSYQLDN 111
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
P RGFS D LDMRMDP+ A +++N+ E+ R++++YGEE + IV+
Sbjct: 112 PARGFSYKRDSLLDMRMDPERGPSARELVNTLTAEELARIIKDYGEERWAFRIAAFIVEE 171
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R R + +TG L ++I+ P G R+ A R FQALRIAVN EL+ L +L +
Sbjct: 172 RKRSPIETTGRLAEIIKKAIPA--GARREGPHPARRTFQALRIAVNRELEVLGGALRSAV 229
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAE------GNEEELRNIRDDNINE 408
L PGGR+ VI++HSLEDRIVK+TF + E G ++E+
Sbjct: 230 RVLRPGGRICVITYHSLEDRIVKETFRRLASPCTCPKEFPACVCGGKKEI---------- 279
Query: 409 TWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
KI+T RP+ PSA E N R RSAKLR+ +K+
Sbjct: 280 ------------KIVTARPVVPSAGEVEENPRARSAKLRIAEKL 311
>gi|334341866|ref|YP_004546846.1| S-adenosyl-methyltransferase MraW [Desulfotomaculum ruminis DSM
2154]
gi|334093220|gb|AEG61560.1| S-adenosyl-methyltransferase MraW [Desulfotomaculum ruminis DSM
2154]
Length = 313
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 130/340 (38%), Positives = 185/340 (54%), Gaps = 36/340 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+PV+L E + + +VDCTLG AGHS I+R+ IG+D DP+AL A
Sbjct: 5 HVPVLLKESIQGLQV-KPDGVYVDCTLGGAGHSREILRSLGAGGRLIGIDQDPAALTHAE 63
Query: 176 AHLNSLLHGQAHPHLKTHTFA---KNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
L + T F NF IK VL Q+D + VD +L DLG+SS Q+
Sbjct: 64 QRLKN----------NTGQFIAVRSNFVQIKEVLAQLD----IAAVDGVLFDLGVSSYQL 109
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ PERGFS + D LDMRM+P+ + A+++++ + E+ ++R+YGEE + + IV
Sbjct: 110 DTPERGFSYMHDAELDMRMNPEQPISAKELIHKLSEPELAEIIRKYGEERWAKRIASFIV 169
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
R R + +T LVD+I++ P G R+ A R FQALRIAVNDEL L ++
Sbjct: 170 AERKRQPITTTARLVDVIKAAVPA--GARREGPHPAKRTFQALRIAVNDELGILAGAIRD 227
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
D L PGGR+ VI+FHSLEDRI+K TF +EL N + +
Sbjct: 228 AVDKLKPGGRICVITFHSLEDRIIKDTF---------------KELAN-PCTCPPDFPVC 271
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ KI+T +P+ PS EE +N R RSAKLR+ +++
Sbjct: 272 ACGKQPGLKIITGKPVEPSLEEVEINPRARSAKLRIGERV 311
>gi|373494333|ref|ZP_09584938.1| ribosomal RNA small subunit methyltransferase H [Eubacterium
infirmum F0142]
gi|371968830|gb|EHO86284.1| ribosomal RNA small subunit methyltransferase H [Eubacterium
infirmum F0142]
Length = 314
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 133/342 (38%), Positives = 190/342 (55%), Gaps = 34/342 (9%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
+ SH+PV+L E +D + + +VD TLG AGHSS I + + IG+D D AL+
Sbjct: 2 EFSHVPVLLDECIDGLNINPD-GIYVDGTLGGAGHSSEICKRLSRKGMLIGIDRDEEALS 60
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
+ L +A H N+ IK++L ++D + ++ L+DLG+SS Q+
Sbjct: 61 VSSRRLEGFDCRKAFVH-------GNYSDIKNILRELDID----EINGALLDLGVSSYQL 109
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+NPERGFS + D PLDMRMD S+ A DI+N + E+ R+++ YGEE + + IV
Sbjct: 110 DNPERGFSYMNDAPLDMRMDRSESMTAYDIVNEYSKDELYRIIKSYGEERWAGRIADFIV 169
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
+AR + +T ELVD+I++ P RR G A R FQA+RI VNDEL ++ ++
Sbjct: 170 RARSEKSIETTFELVDIIKAAVPA-SARRNGP-HPAKRTFQAIRIEVNDELGGVKRAVDD 227
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
D LAP GRL +ISFHSLEDRIVK T++ RE+ E I
Sbjct: 228 FIDLLAPKGRLAIISFHSLEDRIVKDTYVE-----RENPCTCPPE-------------IP 269
Query: 413 QIIQGWNGKI--LTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ G +I + K+PI PS +E N R RSAKLRV +K+
Sbjct: 270 ICVCGKKPEIKRINKKPIVPSKLQENENPRARSAKLRVCEKL 311
>gi|56419646|ref|YP_146964.1| S-adenosyl-methyltransferase MraW [Geobacillus kaustophilus HTA426]
gi|375008077|ref|YP_004981710.1| ribosomal RNA small subunit methyltransferase H [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|68565432|sp|Q5L0Y4.1|RSMH_GEOKA RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|56379488|dbj|BAD75396.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
gi|359286926|gb|AEV18610.1| Ribosomal RNA small subunit methyltransferase H [Geobacillus
thermoleovorans CCB_US3_UF5]
Length = 310
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 132/337 (39%), Positives = 182/337 (54%), Gaps = 30/337 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + R +VDCTLG+ GHS ++ E D D +A+ AR
Sbjct: 4 HTTVLLKEAVDGLNI-RPDGIYVDCTLGSGGHSEYLLSRLSEHGKLFAFDQDEAAIMHAR 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L +G+ + +NFR ++ L + VD +L DLG+SS Q++ P
Sbjct: 63 ERLAR--YGR-----QVQFVHRNFRFLQEELSALGVK----SVDGVLFDLGVSSPQLDEP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRM+ + L A +I+N WP E+ R+ YGEE + KI + R
Sbjct: 112 ERGFSYQHDAPLDMRMNRKQRLTAAEIVNCWPYEELVRIFFRYGEERFSKQVARKIEEVR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +TGELVD+I++ P RR G A R+FQALRIAVNDEL+ +L +
Sbjct: 172 RTRPIKTTGELVDVIKAAIPAP-ARRSGG-HPAKRIFQALRIAVNDELEAFREALEQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
LAPGGR+ VI+FHSLEDRI K+TF ++ L + DD R ++
Sbjct: 230 LLAPGGRVSVITFHSLEDRICKETF-----KKASESPPLPPGLPVLPDD------YRPVL 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
KI+TK+PI PS EE N R RSAKLR+ +K+
Sbjct: 279 -----KIITKKPIVPSEEELERNHRARSAKLRIAEKL 310
>gi|49478448|ref|YP_037980.1| S-adenosyl-methyltransferase MraW [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|54036189|sp|Q6HEP6.1|RSMH_BACHK RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|49330004|gb|AAT60650.1| S-adenosyl-methyltransferase [Bacillus thuringiensis serovar
konkukian str. 97-27]
Length = 310
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 132/337 (39%), Positives = 180/337 (53%), Gaps = 30/337 (8%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
+H+ V+L E +D + ++VDCTLG GHSS ++ E I D D A+ A
Sbjct: 3 NHVTVLLKETVDGLDI-KPDGTYVDCTLGGGGHSSYLLSQLTEGGRLIAFDQDEIAIQNA 61
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+ +S +G+ +K+ NFR++ L ++ + VD IL DLG+SS Q++
Sbjct: 62 KEKFSS--YGEQFITVKS-----NFRYLSEKLQELG----ITEVDGILFDLGVSSPQLDT 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
PERGFS D PLDMRMD ASL A D++NSW ++ R+ +YGEE + KI
Sbjct: 111 PERGFSYHHDAPLDMRMDQDASLTAYDVVNSWSYEQLVRIFFQYGEEKFSKQIARKIEAY 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +TGELV+LI+ P RR G A RVFQA+RIAVNDELK E +L +
Sbjct: 171 RENKAIETTGELVELIKEGIPA-PARRTGG-HPAKRVFQAIRIAVNDELKVFEEALESAI 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
+ + PGGR+ VI+FHSLEDRI K TF R I D
Sbjct: 229 EMVKPGGRVSVITFHSLEDRICKTTF------KRNSTTPQLPPGLPIIPDEFKPKL---- 278
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PI PS E N R RSAKLR+ +K
Sbjct: 279 ------KLITRKPILPSDIELEENNRARSAKLRIAEK 309
>gi|226313432|ref|YP_002773326.1| S-adenosyl-methyltransferase MraW [Brevibacillus brevis NBRC
100599]
gi|263445821|sp|C0ZGB3.1|RSMH_BREBN RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|226096380|dbj|BAH44822.1| S-adenosyl-methyltransferase [Brevibacillus brevis NBRC 100599]
Length = 314
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 133/337 (39%), Positives = 184/337 (54%), Gaps = 30/337 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V++ E + + R +VDCTLG AGHSS I E I +D D AL AR
Sbjct: 8 HVTVLMDEAVQGLNI-RPGGIYVDCTLGGAGHSSLIASKLTEGGRLIAIDQDDWALDNAR 66
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L S + + NFRHIK ++ +++ SGVD +L DLG+SS Q++
Sbjct: 67 ERLASYMD-------RVTLVKSNFRHIKDIV----KDLGLSGVDGVLFDLGVSSPQLDEG 115
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD QA L A DI+N W + E+ +++ YGEE + +IVQ R
Sbjct: 116 ERGFSYNADAPLDMRMDQQAPLSAYDIINEWDEEEIAKIIWLYGEEKFSRRIARQIVQQR 175
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +TGELV+LI+ P RR G A R FQA+RIAVNDEL + ++ +
Sbjct: 176 KKQPIQTTGELVELIKEGIPAA-ARRTG-PHPAKRTFQAIRIAVNDELDAFKEAVVDAIE 233
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L P GR+ VI+FHSLEDRI KQ + ++ ++G N+ +
Sbjct: 234 VLNPEGRVSVITFHSLEDRICKQIY-------QDFSKGCTCPPAFPICTCGNKAVV---- 282
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
K++T++PI PS EE N R RSAKLRV +K+
Sbjct: 283 -----KVITRKPILPSEEELEANKRARSAKLRVAEKL 314
>gi|412993814|emb|CCO14325.1| S-adenosyl-methyltransferase MraW [Bathycoccus prasinos]
Length = 450
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 130/367 (35%), Positives = 199/367 (54%), Gaps = 33/367 (8%)
Query: 109 IQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPE-LKLHIGVDVD 167
I+ H+ V+L EVLD F + I + +D TLGA GH++ ++ H E +K +G DVD
Sbjct: 94 IEAAHHGHVSVLLSEVLDAFKPVK-IQTHIDGTLGAGGHATKVLEQHKEEVKTFVGFDVD 152
Query: 168 PSALAKARAHLNSLLH------GQAHPH---LKTHTFAKNFRHIKSVLGQIDENILRSGV 218
+A+ AR + L G+ + + H NF +++ L +I G
Sbjct: 153 ETAIEIARPRVERSLGVDDASGGEKKSNDGGVALHFVRNNFDQMRAAL----RDIGVDGA 208
Query: 219 DAILMDLGMSSMQVNNPERGFSVLGDGPLDMRM-----------DPQASLKAEDILNSWP 267
D+IL+DLG+SSM ++ ERGFS DGPLDMRM +SL A D++N W
Sbjct: 209 DSILLDLGVSSMHLDRAERGFSFQNDGPLDMRMCGGTTSASSSSSSSSSLTAFDVVNGWS 268
Query: 268 DAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKT 327
+ ++GR+ R+YG E +W LL ++ + R+ + +T ELV + + PG R + I
Sbjct: 269 EEDLGRIFRDYGGERHWKLLAKRVCERRMEKPIETTLELVKALGN-PPGKREK----IHP 323
Query: 328 ATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTF--LSIID 385
ATR FQA+RI NDEL +E + + L PGGRL +I+FHSLED IVK+ F + +
Sbjct: 324 ATRAFQAVRIVTNDELGVIERVIPQAIEVLNPGGRLAIITFHSLEDAIVKKQFRKFAGVP 383
Query: 386 HNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAK 445
+RE G + ++ + + K++ ++PI S EE ++N R RSAK
Sbjct: 384 ESREPTVGRSAMMFLPPEEFDDASSSNPSSSPKIVKMINRKPIGASEEEIKVNARSRSAK 443
Query: 446 LRVIQKI 452
LRV++K+
Sbjct: 444 LRVVEKL 450
>gi|295106887|emb|CBL04430.1| S-adenosyl-methyltransferase MraW [Gordonibacter pamelaeae
7-10-1-b]
Length = 323
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 137/346 (39%), Positives = 193/346 (55%), Gaps = 33/346 (9%)
Query: 110 QQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPS 169
QQQ+ H PV+L E L+ S+ + +FVD TLG AGHS + + IG+D D
Sbjct: 6 QQQEFQHTPVLLAECLEQ-SNLKPQQTFVDATLGGAGHSLEMAKLIGPGGTLIGIDQDEV 64
Query: 170 ALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRS---GVDAILMDLG 226
ALA AR+ L SL GQ N ++ G +D+ ++ + GVDA L DLG
Sbjct: 65 ALAAARSRLESLPDGQR----------PNLELLRGNFGDMDDLLVSAEVPGVDAFLFDLG 114
Query: 227 MSSMQVNNPERGFSVLGDGPLDMRMDP-QASLKAEDILNSWPDAEVGRVLREYGEESNWH 285
+SS+Q++ P RGFS +GPLDMRMDP + +L A +I+N++ A++ R++R Y +E
Sbjct: 115 VSSVQIDTPSRGFSFKENGPLDMRMDPGKTTLTAAEIVNTYNAADLTRIIRAYSDEKWAS 174
Query: 286 LLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKT 345
+ + IV++R G + ++ +LVD+I++ P RR G A R FQALRI VN EL
Sbjct: 175 RIADFIVRSRANGRIETSEQLVDVIKAAIPA-SARRAGG-HPAKRTFQALRIEVNSELDV 232
Query: 346 LESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDN 405
L L A L PGGRL VIS+HSLEDRIVK+TF +A N D
Sbjct: 233 LRRGLDAAVRWLNPGGRLVVISYHSLEDRIVKETF---------NAYAN--RCTCPPDLP 281
Query: 406 INETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ I+ ++T++P+ P+A E N R RSAKLRV +K
Sbjct: 282 VCVCGKEPILD-----LVTRKPLLPTAGEIERNPRARSAKLRVARK 322
>gi|182414441|ref|YP_001819507.1| S-adenosyl-methyltransferase MraW [Opitutus terrae PB90-1]
gi|262824715|sp|B1ZU25.1|RSMH_OPITP RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|177841655|gb|ACB75907.1| S-adenosyl-methyltransferase MraW [Opitutus terrae PB90-1]
Length = 306
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 125/337 (37%), Positives = 176/337 (52%), Gaps = 35/337 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H PV+L EVL F + R ++DCT G GH+ A++ A E+++ + +D DP+A +A
Sbjct: 5 HQPVLLREVLG-FLAPRARGRYLDCTFGGGGHTRALLEAAAEVRV-VALDRDPAAQPRAA 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
A TF + F I G++ E + G D +L D G+SS Q++
Sbjct: 63 A--------------LRETFGERFEFIDRDFGRLAE-LPHEGFDGVLFDFGVSSFQLDET 107
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D P DMRMDP++ + A L + + + R +R++GEE +W + I AR
Sbjct: 108 ERGFSFRHDAPADMRMDPRSGVPASQWLETATEEMLVRAIRDFGEEQHWRRIVRAIRDAR 167
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
G L T L +LI + P R I ATR FQ +RIAVNDE+ +E +L A F
Sbjct: 168 GTGALARTASLAELIAAAIPAC-DRHAAKIHPATRAFQGVRIAVNDEIGAIERALPAAFA 226
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
LAPGG L VISFHSLEDR KQ F + A+ ++LR D
Sbjct: 227 KLAPGGVLCVISFHSLEDRPAKQFFRRMCGQPESAADATPQDLRVKLADP---------- 276
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
LT+RP+TP+ +E N R RSAKLR ++++
Sbjct: 277 -------LTRRPVTPADDELAANPRSRSAKLRALRRL 306
>gi|154685933|ref|YP_001421094.1| S-adenosyl-methyltransferase MraW [Bacillus amyloliquefaciens
FZB42]
gi|263446791|sp|A7Z4D7.1|RSMH_BACA2 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|154351784|gb|ABS73863.1| YlxA [Bacillus amyloliquefaciens FZB42]
Length = 311
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 137/348 (39%), Positives = 186/348 (53%), Gaps = 54/348 (15%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + + ++VDCTLG AGHS+ +++ E I D D +AL A+
Sbjct: 4 HKTVLLRETVDGLNI-KPDGTYVDCTLGGAGHSTYLLQQLSEKGRLIAFDQDDTALENAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L S GQ NFR++K L + I + VD IL DLG+SS Q++ P
Sbjct: 63 KTL-SEYKGQ------LILVKSNFRYLKECLHE--HGI--TSVDGILFDLGVSSPQLDTP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD A+L A++++N W ++ R+ +YGEE + KI +AR
Sbjct: 112 ERGFSYHHDAPLDMRMDQSAALTAKEVVNEWRYEDLVRIFFKYGEEKFSKQIARKIEEAR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +TG+LVDLI+ P RR G A RVFQA+RIAVNDEL+ E +L +
Sbjct: 172 EKSPIQTTGQLVDLIKDAIPAP-ARRSGG-HPAKRVFQAIRIAVNDELQVFEEALLQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTF------------LSIIDHNREDAEGNEEELRNIRD 403
L PGGR+ VI+FHSLEDR+ K TF L +I E E EL
Sbjct: 230 VLKPGGRVSVITFHSLEDRMCKMTFKEKSSLPELPPGLPVI------PEEFEPEL----- 278
Query: 404 DNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PIT S EE N R RSAKLR+ +K
Sbjct: 279 -----------------KLITRKPITASKEELEENNRARSAKLRIAEK 309
>gi|384265098|ref|YP_005420805.1| S-adenosyl-methyltransferase MraW [Bacillus amyloliquefaciens
subsp. plantarum YAU B9601-Y2]
gi|394993851|ref|ZP_10386591.1| 16S rRNA m(4)C1402 methyltransferase [Bacillus sp. 916]
gi|452855464|ref|YP_007497147.1| S-adenosyl-dependent methyltransferase active on membrane-located
substrates [Bacillus amyloliquefaciens subsp. plantarum
UCMB5036]
gi|380498451|emb|CCG49489.1| S-adenosyl-methyltransferase MraW [Bacillus amyloliquefaciens
subsp. plantarum YAU B9601-Y2]
gi|393805422|gb|EJD66801.1| 16S rRNA m(4)C1402 methyltransferase [Bacillus sp. 916]
gi|452079724|emb|CCP21481.1| S-adenosyl-dependent methyltransferase active on membrane-located
substrates [Bacillus amyloliquefaciens subsp. plantarum
UCMB5036]
Length = 311
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 137/348 (39%), Positives = 186/348 (53%), Gaps = 54/348 (15%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + + ++VDCTLG AGHS+ +++ E I D D +AL A+
Sbjct: 4 HKTVLLRETVDGLNI-KPDGTYVDCTLGGAGHSTYLLQQLSEKGRLIAFDQDDTALENAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L S GQ NFR++K L + I + VD IL DLG+SS Q++ P
Sbjct: 63 KTL-SEYKGQ------LILVKSNFRYLKECLHE--HGI--TSVDGILFDLGVSSPQLDTP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD A+L A++++N W ++ R+ +YGEE + KI +AR
Sbjct: 112 ERGFSYHHDAPLDMRMDQSAALTAKEVVNEWRYEDLVRIFFKYGEEKFSKQIARKIEEAR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +TG+LVDLI+ P RR G A RVFQA+RIAVNDEL+ E +L +
Sbjct: 172 EKSPIQTTGQLVDLIKDAIPAP-ARRSGG-HPAKRVFQAIRIAVNDELQVFEEALLQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTF------------LSIIDHNREDAEGNEEELRNIRD 403
L PGGR+ VI+FHSLEDR+ K TF L +I E E EL
Sbjct: 230 VLKPGGRVSVITFHSLEDRMCKTTFKEKSSLPELPPGLPVI------PEEFEPEL----- 278
Query: 404 DNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PIT S EE N R RSAKLR+ +K
Sbjct: 279 -----------------KLITRKPITASKEELEENNRARSAKLRIAEK 309
>gi|308173479|ref|YP_003920184.1| S-adenosyl-dependent methyltransferase [Bacillus amyloliquefaciens
DSM 7]
gi|384159503|ref|YP_005541576.1| 16S rRNA m(4)C1402 methyltranserfase [Bacillus amyloliquefaciens
TA208]
gi|384164060|ref|YP_005545439.1| S-adenosyl-dependent methyltransferase active on membrane-located
substrates [Bacillus amyloliquefaciens LL3]
gi|384168554|ref|YP_005549932.1| S-adenosyl-methyltransferase MraW [Bacillus amyloliquefaciens XH7]
gi|307606343|emb|CBI42714.1| S-adenosyl-dependent methyltransferase active on membrane-located
substrates [Bacillus amyloliquefaciens DSM 7]
gi|328553591|gb|AEB24083.1| 16S rRNA m(4)C1402 methyltranserfase [Bacillus amyloliquefaciens
TA208]
gi|328911615|gb|AEB63211.1| S-adenosyl-dependent methyltransferase active on membrane-located
substrates [Bacillus amyloliquefaciens LL3]
gi|341827833|gb|AEK89084.1| S-adenosyl-methyltransferase MraW [Bacillus amyloliquefaciens XH7]
Length = 311
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 137/348 (39%), Positives = 186/348 (53%), Gaps = 54/348 (15%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + + ++VDCTLG AGHS+ +++ E I D D +AL A+
Sbjct: 4 HKTVLLRETVDGLNI-KPDGTYVDCTLGGAGHSTYLLQQLSEKGRLIAFDQDDTALENAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L S GQ NFR++K L + I + VD IL DLG+SS Q++ P
Sbjct: 63 QTL-SEYKGQ------LILVKSNFRYLKECLHE--HGI--TSVDGILFDLGVSSPQLDTP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD A+L A++++N W ++ R+ +YGEE + KI +AR
Sbjct: 112 ERGFSYHHDAPLDMRMDQSAALTAKEVVNEWRYEDLVRIFFKYGEEKFSKQIARKIEEAR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +TG+LVDLI+ P RR G A RVFQA+RIAVNDEL+ E +L +
Sbjct: 172 EKSPIQTTGQLVDLIKDAIPAP-ARRSGG-HPAKRVFQAIRIAVNDELQVFEEALLQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTF------------LSIIDHNREDAEGNEEELRNIRD 403
L PGGR+ VI+FHSLEDR+ K TF L +I E E EL
Sbjct: 230 VLKPGGRVSVITFHSLEDRMCKTTFKEKSSLPELPPGLPVI------PEEFEPEL----- 278
Query: 404 DNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PIT S EE N R RSAKLR+ +K
Sbjct: 279 -----------------KLITRKPITASKEELEENNRARSAKLRIAEK 309
>gi|354582284|ref|ZP_09001186.1| S-adenosyl-methyltransferase MraW [Paenibacillus lactis 154]
gi|353199683|gb|EHB65145.1| S-adenosyl-methyltransferase MraW [Paenibacillus lactis 154]
Length = 317
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 134/320 (41%), Positives = 166/320 (51%), Gaps = 32/320 (10%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
+VDCTLG AGHSS I I +D D AL AR + P+ T
Sbjct: 24 YVDCTLGGAGHSSLIASQLSSKGRLIALDQDDWALNNAREVMK--------PYADRITLV 75
Query: 197 K-NFRHIKSVL--GQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDP 253
K NFR ++ VL + VD IL DLG+SS Q + ERGFS D PLDMRMD
Sbjct: 76 KTNFRDLEEVLRSETTPGGNEQPQVDGILFDLGVSSPQFDEGERGFSYNHDAPLDMRMDQ 135
Query: 254 QASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSV 313
A L A I+N WP+ E+ R+L EYGEE + I + R + + +TGELV+LI+
Sbjct: 136 SAELTAATIVNEWPEQEISRILHEYGEEKFSRRIAKVIAERRAQRPIQTTGELVELIKEG 195
Query: 314 TPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLED 373
P RR G A R FQA RIAVNDEL + +LH CLAPGGR+ VI+FHSLED
Sbjct: 196 IPAA-ARRTGG-HPAKRSFQAFRIAVNDELGAFQDALHQAVRCLAPGGRVSVITFHSLED 253
Query: 374 RIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNG--KILTKRPITPS 431
RI KQ F S I + + G G K++ ++PI PS
Sbjct: 254 RICKQIFNSYIPKC-----------------TCPPDFPMCVCGGGQGDLKLVNRKPIIPS 296
Query: 432 AEEERLNCRCRSAKLRVIQK 451
AEE N R RSAKLR+ +K
Sbjct: 297 AEEIEGNPRARSAKLRIAEK 316
>gi|302036124|ref|YP_003796446.1| s-adenosyl-L-methionine-dependent methyltransferase mraW
[Candidatus Nitrospira defluvii]
gi|300604188|emb|CBK40520.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Candidatus Nitrospira defluvii]
Length = 309
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 131/345 (37%), Positives = 189/345 (54%), Gaps = 45/345 (13%)
Query: 109 IQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAII-RAHPELKLHIGVDVD 167
I + SH PV++ E+L + + +VDCTLG AG ++ ++ R P+ L +G+D D
Sbjct: 3 IDSARDSHEPVLVEEIL-FWLQCKPGGVYVDCTLGYAGLAARLLDRTAPDGIL-VGIDRD 60
Query: 168 PSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGM 227
+ALA++R L + H + H NF +K+++ I + R VD ++ DLG+
Sbjct: 61 AAALAESRMRLREVAH-------RVHFRHGNFCDLKALI--IGSGVSR--VDGVIFDLGV 109
Query: 228 SSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLL 287
SS Q++ ERGFS DGPLDMRMD + A D++ P+ E+ ++ + GEE +
Sbjct: 110 SSPQLDRAERGFSFREDGPLDMRMDQREGRTAADLVRDLPETELADLIYQLGEERYSRRI 169
Query: 288 QNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLE 347
IVQAR++G + +T +L +++ P R G I ATR FQALRIAVN EL LE
Sbjct: 170 ARAIVQARMQGVIATTWQLAAVVERAVPA--SYRHGRIHCATRTFQALRIAVNRELDVLE 227
Query: 348 SSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNIN 407
+L D LAPGGR+ +SFHSLEDRIVK TF ++ A G E +R
Sbjct: 228 PALRDAVDILAPGGRVCAVSFHSLEDRIVKHTFRAL-------ANGPEASVR-------- 272
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+LTK+P+ S E N R RSAKLRV+++I
Sbjct: 273 --------------VLTKKPVIASENERNRNPRSRSAKLRVVERI 303
>gi|218235035|ref|YP_002368718.1| S-adenosyl-methyltransferase MraW [Bacillus cereus B4264]
gi|263446873|sp|B7H6Q4.1|RSMH_BACC4 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|218162992|gb|ACK62984.1| S-adenosyl-methyltransferase MraW [Bacillus cereus B4264]
Length = 310
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 132/336 (39%), Positives = 179/336 (53%), Gaps = 30/336 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D + + ++VDCTLG GHSS ++ E I D D A+ A+
Sbjct: 4 HVTVLLKETVDGLNI-KPDGTYVDCTLGGGGHSSYLLSQLTEGGKLIAFDQDEIAIQNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
+S +G+ +K+ NFR++ L +I + VD IL DLG+SS Q++ P
Sbjct: 63 EKFSS--YGEQFITVKS-----NFRYLAEKLQEIG----ITEVDGILFDLGVSSPQLDTP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD A L A D++NSW ++ R+ +YGEE + KI R
Sbjct: 112 ERGFSYHHDAPLDMRMDQDAPLTAYDVVNSWSYEQLVRIFFQYGEEKFSKQIARKIEAYR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +TGELV+LI+ P RR G A RVFQA+RIAVNDELK E +L + +
Sbjct: 172 ENKAIETTGELVELIKEGIPA-PARRTGG-HPAKRVFQAIRIAVNDELKVFEEALESAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
+ PGGR+ VI+FHSLEDRI K TF R I D
Sbjct: 230 MVKPGGRVSVITFHSLEDRICKTTF------KRNSTTPQLPPGLPIIPDEFKPKL----- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PI PS E N R RSAKLR+ +K
Sbjct: 279 -----KLITRKPILPSDIELEENNRARSAKLRIAEK 309
>gi|229104481|ref|ZP_04235148.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus Rock3-28]
gi|228678923|gb|EEL33133.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus Rock3-28]
Length = 310
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 130/336 (38%), Positives = 178/336 (52%), Gaps = 30/336 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D + ++VDCTLG GHSS ++ + I D D A+ A+
Sbjct: 4 HVTVLLKETVDGLDI-KPDGTYVDCTLGGGGHSSYLLSQLTDGGKLIAFDQDEIAIQNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
+S +G+ +K+ NFR++ L ++ + VD IL DLG+SS Q++ P
Sbjct: 63 EKFSS--YGEQFITVKS-----NFRYLSEKLQELG----ITEVDGILFDLGVSSPQLDTP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD A L A D++NSW ++ R+ +YGEE + KI R
Sbjct: 112 ERGFSYHHDAPLDMRMDQDAPLTAYDVINSWSYEQLVRIFFQYGEEKFSKQIARKIEAYR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +TGELV+LI+ P RR G A RVFQA+RIAVNDELK E +L + +
Sbjct: 172 ENKAIETTGELVELIKEGIPAP-ARRTGG-HPAKRVFQAIRIAVNDELKVFEEALESAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
+ PGGR+ VI+FHSLEDRI K TF R I D
Sbjct: 230 MVKPGGRVSVITFHSLEDRICKTTF------KRNSTTPPLPPGLPIIPDEFKPKL----- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PI PS E N R RSAKLR+ +K
Sbjct: 279 -----KLITRKPILPSDIELEENNRARSAKLRIAEK 309
>gi|30022007|ref|NP_833638.1| S-adenosyl-methyltransferase MraW [Bacillus cereus ATCC 14579]
gi|75762006|ref|ZP_00741921.1| S-adenosyl-methyltransferase mraW [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|206971097|ref|ZP_03232048.1| S-adenosyl-methyltransferase MraW [Bacillus cereus AH1134]
gi|218899072|ref|YP_002447483.1| S-adenosyl-methyltransferase MraW [Bacillus cereus G9842]
gi|228902424|ref|ZP_04066578.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
thuringiensis IBL 4222]
gi|228909744|ref|ZP_04073567.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
thuringiensis IBL 200]
gi|228922671|ref|ZP_04085971.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|228941007|ref|ZP_04103565.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
thuringiensis serovar berliner ATCC 10792]
gi|228954195|ref|ZP_04116223.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|228960136|ref|ZP_04121800.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|228966872|ref|ZP_04127916.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
thuringiensis serovar sotto str. T04001]
gi|228973938|ref|ZP_04134513.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228980527|ref|ZP_04140837.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
thuringiensis Bt407]
gi|229047603|ref|ZP_04193193.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus AH676]
gi|229071418|ref|ZP_04204640.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus F65185]
gi|229081171|ref|ZP_04213681.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus Rock4-2]
gi|229111388|ref|ZP_04240941.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus Rock1-15]
gi|229129196|ref|ZP_04258169.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus BDRD-Cer4]
gi|229146490|ref|ZP_04274861.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus BDRD-ST24]
gi|229152116|ref|ZP_04280311.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus m1550]
gi|229180194|ref|ZP_04307538.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus 172560W]
gi|229192088|ref|ZP_04319057.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus ATCC 10876]
gi|296504412|ref|YP_003666112.1| S-adenosyl-methyltransferase MraW [Bacillus thuringiensis BMB171]
gi|365159302|ref|ZP_09355483.1| ribosomal RNA small subunit methyltransferase H [Bacillus sp.
7_6_55CFAA_CT2]
gi|384187979|ref|YP_005573875.1| S-adenosyl-methyltransferase MraW [Bacillus thuringiensis serovar
chinensis CT-43]
gi|402564737|ref|YP_006607461.1| 16S rRNA m(4)C1402 methyltransferase [Bacillus thuringiensis
HD-771]
gi|410676294|ref|YP_006928665.1| ribosomal RNA small subunit methyltransferase H [Bacillus
thuringiensis Bt407]
gi|423359045|ref|ZP_17336548.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
VD022]
gi|423385420|ref|ZP_17362676.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
BAG1X1-2]
gi|423412278|ref|ZP_17389398.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
BAG3O-2]
gi|423426053|ref|ZP_17403084.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
BAG3X2-2]
gi|423431937|ref|ZP_17408941.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
BAG4O-1]
gi|423437371|ref|ZP_17414352.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
BAG4X12-1]
gi|423503405|ref|ZP_17479997.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
HD73]
gi|423528222|ref|ZP_17504667.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
HuB1-1]
gi|423561676|ref|ZP_17537952.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
MSX-A1]
gi|423582128|ref|ZP_17558239.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
VD014]
gi|423585672|ref|ZP_17561759.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
VD045]
gi|423629013|ref|ZP_17604762.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
VD154]
gi|423635309|ref|ZP_17610962.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
VD156]
gi|423641003|ref|ZP_17616621.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
VD166]
gi|423649780|ref|ZP_17625350.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
VD169]
gi|423656779|ref|ZP_17632078.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
VD200]
gi|434377023|ref|YP_006611667.1| 16S rRNA m(4)C1402 methyltransferase [Bacillus thuringiensis
HD-789]
gi|449090860|ref|YP_007423301.1| S-adenosyl-methyltransferase MraW [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|452200360|ref|YP_007480441.1| rRNA small subunit methyltransferase H [Bacillus thuringiensis
serovar thuringiensis str. IS5056]
gi|33301351|sp|Q819P8.1|RSMH_BACCR RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|263446850|sp|B7IVF3.1|RSMH_BACC2 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|29897563|gb|AAP10839.1| S-adenosyl-methyltransferase mraW [Bacillus cereus ATCC 14579]
gi|74490508|gb|EAO53809.1| S-adenosyl-methyltransferase mraW [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|206733869|gb|EDZ51040.1| S-adenosyl-methyltransferase MraW [Bacillus cereus AH1134]
gi|218540802|gb|ACK93196.1| S-adenosyl-methyltransferase MraW [Bacillus cereus G9842]
gi|228591414|gb|EEK49264.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus ATCC 10876]
gi|228603403|gb|EEK60880.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus 172560W]
gi|228631465|gb|EEK88099.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus m1550]
gi|228637123|gb|EEK93582.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus BDRD-ST24]
gi|228654433|gb|EEL10298.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus BDRD-Cer4]
gi|228672164|gb|EEL27455.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus Rock1-15]
gi|228702215|gb|EEL54691.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus Rock4-2]
gi|228711709|gb|EEL63662.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus F65185]
gi|228723850|gb|EEL75205.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus AH676]
gi|228779347|gb|EEM27604.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
thuringiensis Bt407]
gi|228785804|gb|EEM33808.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228792971|gb|EEM40529.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
thuringiensis serovar sotto str. T04001]
gi|228799652|gb|EEM46605.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|228805515|gb|EEM52106.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|228818686|gb|EEM64753.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
thuringiensis serovar berliner ATCC 10792]
gi|228837100|gb|EEM82441.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|228850033|gb|EEM94864.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
thuringiensis IBL 200]
gi|228857168|gb|EEN01674.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
thuringiensis IBL 4222]
gi|296325464|gb|ADH08392.1| S-adenosyl-methyltransferase MraW [Bacillus thuringiensis BMB171]
gi|326941688|gb|AEA17584.1| S-adenosyl-methyltransferase MraW [Bacillus thuringiensis serovar
chinensis CT-43]
gi|363625300|gb|EHL76341.1| ribosomal RNA small subunit methyltransferase H [Bacillus sp.
7_6_55CFAA_CT2]
gi|401084917|gb|EJP93163.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
VD022]
gi|401104346|gb|EJQ12323.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
BAG3O-2]
gi|401110800|gb|EJQ18699.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
BAG3X2-2]
gi|401116693|gb|EJQ24531.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
BAG4O-1]
gi|401120526|gb|EJQ28322.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
BAG4X12-1]
gi|401201933|gb|EJR08798.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
MSX-A1]
gi|401213007|gb|EJR19748.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
VD014]
gi|401233018|gb|EJR39514.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
VD045]
gi|401268558|gb|EJR74606.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
VD154]
gi|401278060|gb|EJR83996.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
VD156]
gi|401280064|gb|EJR85986.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
VD166]
gi|401283060|gb|EJR88957.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
VD169]
gi|401290520|gb|EJR96214.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
VD200]
gi|401635476|gb|EJS53231.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
BAG1X1-2]
gi|401793389|gb|AFQ19428.1| 16S rRNA m(4)C1402 methyltransferase [Bacillus thuringiensis
HD-771]
gi|401875580|gb|AFQ27747.1| 16S rRNA m(4)C1402 methyltransferase [Bacillus thuringiensis
HD-789]
gi|402451885|gb|EJV83704.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
HuB1-1]
gi|402459626|gb|EJV91363.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
HD73]
gi|409175423|gb|AFV19728.1| ribosomal RNA small subunit methyltransferase H [Bacillus
thuringiensis Bt407]
gi|449024617|gb|AGE79780.1| S-adenosyl-methyltransferase MraW [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|452105753|gb|AGG02693.1| rRNA small subunit methyltransferase H [Bacillus thuringiensis
serovar thuringiensis str. IS5056]
Length = 310
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 132/336 (39%), Positives = 178/336 (52%), Gaps = 30/336 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D + ++VDCTLG GHSS ++ E I D D A+ A+
Sbjct: 4 HVTVLLKETVDGLDI-KPDGTYVDCTLGGGGHSSYLLSQLTEGGKLIAFDQDEIAIQNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
+S +G+ +K+ NFR++ L +I + VD IL DLG+SS Q++ P
Sbjct: 63 EKFSS--YGEQFITVKS-----NFRYLAEKLQEIG----ITEVDGILFDLGVSSPQLDTP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD A L A D++NSW ++ R+ +YGEE + KI R
Sbjct: 112 ERGFSYHHDAPLDMRMDQDAPLTAYDVVNSWSYEQLVRIFFQYGEEKFSKQIARKIEAYR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +TGELV+LI+ P RR G A RVFQA+RIAVNDELK E +L + +
Sbjct: 172 ENKAIETTGELVELIKEGIPA-PARRTGG-HPAKRVFQAIRIAVNDELKVFEEALESAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
+ PGGR+ VI+FHSLEDRI K TF R I D
Sbjct: 230 MVKPGGRVSVITFHSLEDRICKTTF------KRNSTTPQLPPGLPIIPDEFKPKL----- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PI PS E N R RSAKLR+ +K
Sbjct: 279 -----KLITRKPILPSDIELEENNRARSAKLRIAEK 309
>gi|415886469|ref|ZP_11548249.1| S-adenosyl-methyltransferase MraW [Bacillus methanolicus MGA3]
gi|387587156|gb|EIJ79479.1| S-adenosyl-methyltransferase MraW [Bacillus methanolicus MGA3]
Length = 310
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 127/320 (39%), Positives = 173/320 (54%), Gaps = 37/320 (11%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
+VDCTLG AGHS I++ D D +A+A A+ L + +G+ K
Sbjct: 24 YVDCTLGGAGHSELILKHLSGRGKLFAFDQDETAIAHAKEKL--IPYGE-----KITIIK 76
Query: 197 KNFRHIKSVLGQ--IDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQ 254
NF +I+ L + ID+ VD +L DLG+SS Q++NPERGFS D PLDMRMD
Sbjct: 77 SNFLYIEEELSKFGIDK------VDGVLYDLGVSSPQLDNPERGFSYHHDAPLDMRMDKD 130
Query: 255 ASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVT 314
A L A D++N WP ++ R+ +YGEE + KI AR + + +TGELV++I+
Sbjct: 131 AELSAFDVINYWPYEDLVRIFFQYGEEKFSKQIARKIETARAKKAIETTGELVEIIKDAI 190
Query: 315 PGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDR 374
P R+ G A R+FQA+RIAVNDEL E SL + L GGR+ VI+FHSLEDR
Sbjct: 191 PAPARRKGGH--PAKRIFQAVRIAVNDELGVFEKSLQKSINLLNKGGRISVITFHSLEDR 248
Query: 375 IVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNG--KILTKRPITPSA 432
I K F N E N+ + I Q + K++T++PI PS
Sbjct: 249 ICKTVF------------KNASETPNL------PPGLPVIPQEYKPIMKLITRKPIVPSE 290
Query: 433 EEERLNCRCRSAKLRVIQKI 452
E N R RSAKLR+ +K+
Sbjct: 291 RELEQNNRARSAKLRIAEKL 310
>gi|375362161|ref|YP_005130200.1| S-adenosyl-methyltransferase MraW [Bacillus amyloliquefaciens
subsp. plantarum CAU B946]
gi|421731815|ref|ZP_16170938.1| 16S rRNA m(4)C1402 methyltransferase [Bacillus amyloliquefaciens
subsp. plantarum M27]
gi|451347114|ref|YP_007445745.1| 16S rRNA m(4)C1402 methyltransferase [Bacillus amyloliquefaciens
IT-45]
gi|371568155|emb|CCF05005.1| S-adenosyl-methyltransferase MraW [Bacillus amyloliquefaciens
subsp. plantarum CAU B946]
gi|407074028|gb|EKE47018.1| 16S rRNA m(4)C1402 methyltransferase [Bacillus amyloliquefaciens
subsp. plantarum M27]
gi|449850872|gb|AGF27864.1| 16S rRNA m(4)C1402 methyltransferase [Bacillus amyloliquefaciens
IT-45]
Length = 311
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 137/348 (39%), Positives = 186/348 (53%), Gaps = 54/348 (15%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + + ++VDCTLG AGHS+ +++ E I D D +AL A+
Sbjct: 4 HKTVLLRETVDGLNI-KPDGTYVDCTLGGAGHSTYLLQQLSEKGRLIAFDQDDTALENAQ 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L S GQ NFR++K L + I + VD IL DLG+SS Q++ P
Sbjct: 63 KTL-SEYKGQ------LILVKSNFRYLKECLHE--HGI--TSVDGILFDLGVSSPQLDTP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD A+L A++++N W ++ R+ +YGEE + KI +AR
Sbjct: 112 ERGFSYHHDAPLDMRMDQSAALTAKEVVNEWRYEDLVRIFFKYGEEKFSKQIARKIEEAR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +TG+LVDLI+ P RR G A RVFQA+RIAVNDEL+ E +L +
Sbjct: 172 EKSPIQTTGQLVDLIKDAIPAP-ARRSGG-HPAKRVFQAIRIAVNDELQVFEEALLQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTF------------LSIIDHNREDAEGNEEELRNIRD 403
L PGGR+ VI+FHSLEDR+ K TF L +I E E EL
Sbjct: 230 VLKPGGRVSVITFHSLEDRMCKTTFKEKSSLPELPPGLPVI------PEEFEPEL----- 278
Query: 404 DNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PIT S EE N R RSAKLR+ +K
Sbjct: 279 -----------------KLITRKPITASKEELEENNRARSAKLRIAEK 309
>gi|385264641|ref|ZP_10042728.1| S-adenosyl-dependent methyltransferase [Bacillus sp. 5B6]
gi|385149137|gb|EIF13074.1| S-adenosyl-dependent methyltransferase [Bacillus sp. 5B6]
Length = 311
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 137/348 (39%), Positives = 185/348 (53%), Gaps = 54/348 (15%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + + ++VDCTLG AGHS+ +++ E I D D +AL A+
Sbjct: 4 HKTVLLRETVDGLNI-KPDGTYVDCTLGGAGHSTYLLQQLSEKGRLIAFDQDDTALENAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L S GQ NFR++K L + I + VD IL DLG+SS Q++ P
Sbjct: 63 KTL-SEYKGQ------LILVKSNFRYLKECLHE--HGI--TSVDGILFDLGVSSPQLDTP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD A+L A++++N W ++ R+ YGEE + KI +AR
Sbjct: 112 ERGFSYHHDAPLDMRMDQSAALTAKEVVNEWRYEDLVRIFFRYGEEKFSKQIARKIEEAR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +TG+LVDLI+ P RR G A RVFQA+RIAVNDEL+ E +L +
Sbjct: 172 EKSPIQTTGQLVDLIKDAIPAP-ARRSGG-HPAKRVFQAIRIAVNDELQVFEEALLQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTF------------LSIIDHNREDAEGNEEELRNIRD 403
L PGGR+ VI+FHSLEDR+ K TF L +I E E EL
Sbjct: 230 VLKPGGRVSVITFHSLEDRMCKTTFKEKSSLPELPPGLPVI------PEEFEPEL----- 278
Query: 404 DNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PIT S EE N R RSAKLR+ +K
Sbjct: 279 -----------------KLITRKPITASKEELEENNRARSAKLRIAEK 309
>gi|228992654|ref|ZP_04152580.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
pseudomycoides DSM 12442]
gi|228766986|gb|EEM15623.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
pseudomycoides DSM 12442]
Length = 317
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 131/336 (38%), Positives = 178/336 (52%), Gaps = 30/336 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D + ++VDCTLG GHSS ++ E I D D A+ A+
Sbjct: 11 HVTVLLKETVDGLDI-KPGGTYVDCTLGGGGHSSYLLSQLTEGGKLIAFDQDEIAIQNAK 69
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
+S +G +K+ NFR++ L ++ + VD IL DLG+SS Q++ P
Sbjct: 70 ERFSS--YGDQFITVKS-----NFRYLSEKLHELG----ITEVDGILFDLGVSSPQLDTP 118
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD A L A D++N+W ++ R+ +YGEE + KI R
Sbjct: 119 ERGFSYHHDAPLDMRMDQDAPLTAYDVVNNWSYEQLVRIFFQYGEEKFSKQIARKIEAYR 178
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +TGELV+LI+ P RR G A RVFQA+RIAVNDELK E +L + +
Sbjct: 179 ENKAIETTGELVELIKEGIPA-PARRTGG-HPAKRVFQAIRIAVNDELKVFEEALESAIE 236
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
+ PGGR+ VI+FHSLEDRI K TF R I D
Sbjct: 237 MVKPGGRISVITFHSLEDRICKTTF------KRNSTTPQLPPGLPIIPDEFKPKL----- 285
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PI PS EE N R RSAKLR+ +K
Sbjct: 286 -----KLITRKPILPSDEELEENNRARSAKLRIAEK 316
>gi|429505068|ref|YP_007186252.1| 16S rRNA methyltransferase [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|429486658|gb|AFZ90582.1| 16S rRNA methyltransferase [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
Length = 311
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 136/348 (39%), Positives = 186/348 (53%), Gaps = 54/348 (15%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + + ++VDCTLG AGHS+ +++ E I D D +AL A+
Sbjct: 4 HKTVLLRETVDGLNI-KPDGTYVDCTLGGAGHSTYLLQQLSEKGRLIAFDQDDTALENAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L S GQ NFR++K L + I + VD +L DLG+SS Q++ P
Sbjct: 63 KTL-SEYKGQ------LILVKSNFRYLKECLHE--HGI--TSVDGVLFDLGVSSPQLDTP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD A+L A++++N W ++ R+ +YGEE + KI +AR
Sbjct: 112 ERGFSYHHDAPLDMRMDQSAALTAKEVVNEWRYEDLVRIFFKYGEEKFSKQIARKIEEAR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +TG+LVDLI+ P RR G A RVFQA+RIAVNDEL+ E +L +
Sbjct: 172 EKSPIQTTGQLVDLIKDAIPAP-ARRSGG-HPAKRVFQAIRIAVNDELQVFEEALLQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTF------------LSIIDHNREDAEGNEEELRNIRD 403
L PGGR+ VI+FHSLEDR+ K TF L +I E E EL
Sbjct: 230 VLKPGGRVSVITFHSLEDRMCKTTFKEKSSLPELPPGLPVI------PEEFEPEL----- 278
Query: 404 DNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PIT S EE N R RSAKLR+ +K
Sbjct: 279 -----------------KLITRKPITASKEELEENNRARSAKLRIAEK 309
>gi|228998700|ref|ZP_04158287.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
mycoides Rock3-17]
gi|229006202|ref|ZP_04163888.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
mycoides Rock1-4]
gi|228755043|gb|EEM04402.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
mycoides Rock1-4]
gi|228761168|gb|EEM10127.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
mycoides Rock3-17]
Length = 317
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 131/336 (38%), Positives = 178/336 (52%), Gaps = 30/336 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D + ++VDCTLG GHSS ++ E I D D A+ A+
Sbjct: 11 HVTVLLKETVDGLDI-KPGGTYVDCTLGGGGHSSYLLSQLTEGGKLIAFDQDEIAIQNAK 69
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
+S +G +K+ NFR++ L ++ + VD IL DLG+SS Q++ P
Sbjct: 70 ERFSS--YGDQFITVKS-----NFRYLSEKLHELG----ITEVDGILFDLGVSSPQLDTP 118
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD A L A D++N+W ++ R+ +YGEE + KI R
Sbjct: 119 ERGFSYHHDAPLDMRMDQDAPLTAYDVVNNWSYEQLVRIFFQYGEEKFSKQITRKIEAYR 178
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +TGELV+LI+ P RR G A RVFQA+RIAVNDELK E +L + +
Sbjct: 179 ENKAIETTGELVELIKEGIPA-PARRTGG-HPAKRVFQAIRIAVNDELKVFEEALESAIE 236
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
+ PGGR+ VI+FHSLEDRI K TF R I D
Sbjct: 237 MVKPGGRISVITFHSLEDRICKTTF------KRNSTTPQLPPGLPIIPDEFKPKL----- 285
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PI PS EE N R RSAKLR+ +K
Sbjct: 286 -----KLITRKPILPSDEELEENNRARSAKLRIAEK 316
>gi|347755684|ref|YP_004863248.1| S-adenosyl-methyltransferase MraW [Candidatus Chloracidobacterium
thermophilum B]
gi|347588202|gb|AEP12732.1| S-adenosyl-methyltransferase MraW [Candidatus Chloracidobacterium
thermophilum B]
Length = 320
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 130/337 (38%), Positives = 185/337 (54%), Gaps = 32/337 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H PV+ EVL + + FVD T+G GHS+A++ A ++ + +D D SAL +A
Sbjct: 15 HTPVLAAEVLTALAPTPG-KRFVDGTVGLGGHSAALLAAGAQV---LAIDRDASALRQAA 70
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L H +FR +K+VL Q S VD IL+DLG+SS Q++ P
Sbjct: 71 ERLARYGDQVCFVH-------ADFRSLKTVLNQPGW----SEVDGILVDLGVSSWQLDEP 119
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
RGFS DGPLDMRMD + A DI+N+W + + ++R++GEE + +IVQAR
Sbjct: 120 ARGFSFRHDGPLDMRMDTSQPVTAADIVNTWEEEPLAELIRQWGEERYARQVAYRIVQAR 179
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +TG+L +++ P RG ++ I ATR FQALRIAVN EL LE+ + D
Sbjct: 180 RQTPIRTTGQLAAIVRQAIP-QRGPQR--IDPATRTFQALRIAVNRELDGLETFVSEATD 236
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
LAPGGRL VI+FHSLEDR +K+ RE + DD + W R++
Sbjct: 237 VLAPGGRLAVITFHSLEDRPIKRAL------RREAGIPD--------DDAPTDFWGRRVT 282
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++L +RPI P+ E N R RSAKLR +++
Sbjct: 283 PTPRLRLLHRRPIIPTDAEVASNPRARSAKLRAAERL 319
>gi|229174585|ref|ZP_04302115.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus MM3]
gi|423457897|ref|ZP_17434694.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
BAG5X2-1]
gi|228608890|gb|EEK66182.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus MM3]
gi|401148281|gb|EJQ55774.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
BAG5X2-1]
Length = 310
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 132/336 (39%), Positives = 178/336 (52%), Gaps = 30/336 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D + ++VDCTLG GHSS ++ E I D D A+ A+
Sbjct: 4 HVTVLLKETVDGLDI-KPDGTYVDCTLGGGGHSSYLLSQLTEGGRLIAFDQDEIAIQNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
+S +G+ +K+ NFR++ L ++ + VD IL DLG+SS Q++ P
Sbjct: 63 EKFSS--YGEQFITVKS-----NFRYLSEKLQELG----ITEVDGILFDLGVSSPQLDTP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD A L A D++NSW ++ R+ +YGEE + KI R
Sbjct: 112 ERGFSYHHDAPLDMRMDQDAPLTAYDVVNSWSYEQLVRIFFQYGEEKFSKQIVRKIEAYR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +TGELV+LI+ P RR G A RVFQA+RIAVNDELK E +L + D
Sbjct: 172 ENKAIETTGELVELIKEGIPA-PARRTGG-HPAKRVFQAIRIAVNDELKVFEEALESAID 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
+ PGGR+ VI+FHSLEDRI K TF R I D
Sbjct: 230 MVKPGGRVSVITFHSLEDRICKTTF------KRNSTTPQLPPGLPIIPDEFKPKL----- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PI PS E N R RSAKLR+ +K
Sbjct: 279 -----KLITRKPILPSDIELEENNRARSAKLRIAEK 309
>gi|167636587|ref|ZP_02394881.1| S-adenosyl-methyltransferase MraW [Bacillus anthracis str. A0442]
gi|170688833|ref|ZP_02880036.1| S-adenosyl-methyltransferase MraW [Bacillus anthracis str. A0465]
gi|254683371|ref|ZP_05147231.1| S-adenosyl-methyltransferase MraW [Bacillus anthracis str.
CNEVA-9066]
gi|254743854|ref|ZP_05201537.1| S-adenosyl-methyltransferase MraW [Bacillus anthracis str. Kruger
B]
gi|421639673|ref|ZP_16080264.1| 16S rRNA m(4)C1402 methyltransferase [Bacillus anthracis str. BF1]
gi|167528010|gb|EDR90816.1| S-adenosyl-methyltransferase MraW [Bacillus anthracis str. A0442]
gi|170667188|gb|EDT17948.1| S-adenosyl-methyltransferase MraW [Bacillus anthracis str. A0465]
gi|403393338|gb|EJY90583.1| 16S rRNA m(4)C1402 methyltransferase [Bacillus anthracis str. BF1]
Length = 310
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 131/337 (38%), Positives = 179/337 (53%), Gaps = 30/337 (8%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
+H+ V+L E +D + ++VDCTLG GHSS ++ E I D D A+ A
Sbjct: 3 NHVTVLLKETVDGLDI-KPDGTYVDCTLGGGGHSSYLLSQLTEGGRLIAFDQDEIAIQNA 61
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+ +S +G+ +K+ NFR++ L ++ + VD IL DLG+SS Q++
Sbjct: 62 KEKFSS--YGEQFITVKS-----NFRYLSEKLQELG----ITEVDGILFDLGVSSPQLDT 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
PERGFS D PLDMRMD A L A D++NSW ++ R+ +YGEE + KI
Sbjct: 111 PERGFSYHHDAPLDMRMDQDAPLTAYDVVNSWSYEQLVRIFFQYGEEKFSKQIARKIEAY 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +TGELV+LI+ P RR G A RVFQA+RIAVNDELK E +L +
Sbjct: 171 RENKAIETTGELVELIKEGIPA-PARRTGG-HPAKRVFQAIRIAVNDELKVFEEALESAI 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
+ + PGGR+ VI+FHSLEDRI K TF R I D
Sbjct: 229 EMVKPGGRVSVITFHSLEDRICKTTF------KRNSTTPQLPPGLPITPDEFKPKL---- 278
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PI PS E N R RSAKLR+ +K
Sbjct: 279 ------KLITRKPILPSDIELEENNRARSAKLRIAEK 309
>gi|448237279|ref|YP_007401337.1| S-adenosyl-L-methionine-dependent methyltransferase [Geobacillus
sp. GHH01]
gi|445206121|gb|AGE21586.1| S-adenosyl-L-methionine-dependent methyltransferase [Geobacillus
sp. GHH01]
Length = 310
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 134/338 (39%), Positives = 184/338 (54%), Gaps = 32/338 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAII-RAHPELKLHIGVDVDPSALAKA 174
H V+L E +D + R +VDCTLG+ GHS ++ R KL D D +A+ A
Sbjct: 4 HTTVLLKEAVDGLNI-RPDGIYVDCTLGSGGHSEYLLSRLSARGKL-FAFDQDEAAIMHA 61
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
R L +G+ + +NFR ++ L + VD +L DLG+SS Q++
Sbjct: 62 RERLAR--YGR-----QVQFVHRNFRFLQEELSALGVK----SVDGVLFDLGVSSPQLDE 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
PERGFS D PLDMRM+ + L A +I+N WP E+ R+ YGEE + KI +
Sbjct: 111 PERGFSYQHDAPLDMRMNRKQRLTAAEIVNCWPYEELVRIFFRYGEERFSKQVARKIEEV 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +TGELVD+I++ P RR G A R+FQALRIAVNDEL+ +L
Sbjct: 171 RRTRPIKTTGELVDVIKAAIPAP-ARRSGG-HPAKRIFQALRIAVNDELEAFREALEQAI 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
+ LAPGGR+ VI+FHSLEDRI K+TF ++ L + DD R +
Sbjct: 229 ELLAPGGRVSVITFHSLEDRICKETF-----KKASESPPLPPGLPVLPDD------YRPV 277
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ KI+TK+PI PS EE N R RSAKLR+ +K+
Sbjct: 278 L-----KIITKKPIVPSEEELERNHRARSAKLRIAEKL 310
>gi|373857216|ref|ZP_09599958.1| S-adenosyl-methyltransferase MraW [Bacillus sp. 1NLA3E]
gi|372452866|gb|EHP26335.1| S-adenosyl-methyltransferase MraW [Bacillus sp. 1NLA3E]
Length = 311
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 137/339 (40%), Positives = 181/339 (53%), Gaps = 36/339 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + + +VDCTLG AGHS I+ + D D +A+A A+
Sbjct: 4 HTTVLLHEAVDGLNIKQD-GIYVDCTLGGAGHSELILSKLSDKGHLFAFDQDETAIAYAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L+ H T K NF ++K L D I VD +L DLG+SS Q++N
Sbjct: 63 EKLSQ--------HKNKITMIKSNFSNLKEEL--FDLGIYH--VDGVLYDLGVSSPQLDN 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
PERGFS D PLDMRMD Q+S+ A D++NSW ++ R+ +YGEE + KI A
Sbjct: 111 PERGFSYHHDAPLDMRMDKQSSVSAYDVINSWRYEDLVRIFFQYGEEKFSKQIARKIEAA 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +T ELVDLI+ P R+ G A R+FQA+RIAVNDEL ESSL
Sbjct: 171 RDIKPIETTFELVDLIKEAIPAPARRKGG--HPAKRIFQAIRIAVNDELGVFESSLKDAM 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
D L P GR+ VI+FHSLEDRI K TF E N+ + I
Sbjct: 229 DILNPQGRISVITFHSLEDRICKVTF------------KKASETPNL------PHGLPII 270
Query: 415 IQGWNG--KILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ + K++T++PI PS EE N R RSAKLRV++K
Sbjct: 271 PKEYQPLMKLITRKPIVPSEEELVENNRARSAKLRVVEK 309
>gi|423389772|ref|ZP_17366998.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
BAG1X1-3]
gi|423418173|ref|ZP_17395262.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
BAG3X2-1]
gi|401106446|gb|EJQ14407.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
BAG3X2-1]
gi|401641863|gb|EJS59580.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
BAG1X1-3]
Length = 310
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 132/336 (39%), Positives = 178/336 (52%), Gaps = 30/336 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D + T +VDCTLG GHSS ++ + I D D A+ A+
Sbjct: 4 HVTVLLKETVDGLDIKPSGT-YVDCTLGGGGHSSYLLSQLTDGGKLIAFDQDEIAIQNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
+S +G+ +K+ NFR++ L ++ + VD IL DLG+SS Q++ P
Sbjct: 63 EKFSS--YGEQFVTVKS-----NFRYLSEKLHELG----ITEVDGILFDLGVSSPQLDTP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD A L A D++NSW ++ R+ +YGEE + KI R
Sbjct: 112 ERGFSYHHDAPLDMRMDQDAPLTAYDVVNSWSYEQLVRIFFQYGEEKFSKQIVRKIEAYR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +TGELV+LI+ P RR G A RVFQA+RIAVNDELK E +L + D
Sbjct: 172 ENKAIETTGELVELIKEGIPA-PARRTGG-HPAKRVFQAIRIAVNDELKVFEEALESAID 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
+ PGGR+ VI+FHSLEDRI K TF R I D
Sbjct: 230 MVKPGGRVSVITFHSLEDRICKTTF------KRNSTTPQLPPGLPIIPDEFKPKL----- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PI PS E N R RSAKLR+ +K
Sbjct: 279 -----KLITRKPILPSDIELEENNRARSAKLRIAEK 309
>gi|365157046|ref|ZP_09353327.1| ribosomal RNA small subunit methyltransferase H [Bacillus smithii
7_3_47FAA]
gi|363625780|gb|EHL76791.1| ribosomal RNA small subunit methyltransferase H [Bacillus smithii
7_3_47FAA]
Length = 311
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 138/342 (40%), Positives = 177/342 (51%), Gaps = 40/342 (11%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + R +VDCTLG GHS + E I D D +AL A+
Sbjct: 5 HETVLLKEAVDGLNV-RPDGIYVDCTLGGGGHSQYLASKLSERGRLIAFDQDVTALQFAK 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L + TF K NFR IK L E+I VD IL DLG+SS Q++
Sbjct: 64 EKLAD--------YRDQITFVKSNFRFIKQEL----ESIGCYKVDGILYDLGVSSPQLDT 111
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
PERGFS D PLDMRMD A +I+N WP ++ R+ YGEE + KI +A
Sbjct: 112 PERGFSYHHDAPLDMRMDLDGERTAYEIVNEWPYEDLVRIFFRYGEEKFSKPIARKIEEA 171
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + + +TG+LV+LI+ P R+ G A RVFQA+RIAVNDEL E SL+
Sbjct: 172 RKKAPIETTGQLVELIKEAIPAPARRKGG--HPAKRVFQAIRIAVNDELSAFEQSLNDAI 229
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGN----EEELRNIRDDNINETW 410
+ L PGGR+ VI+FHSLEDRI KQ F S+ + D EE R
Sbjct: 230 ELLNPGGRISVITFHSLEDRICKQIFKSL--SSAPDLPPGLPILPEEYRP---------- 277
Query: 411 IRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
K++TK+PI P+ E N R RSAKLR+ +KI
Sbjct: 278 --------KLKVITKKPIVPNEAEIMNNNRARSAKLRIAEKI 311
>gi|152976280|ref|YP_001375797.1| S-adenosyl-methyltransferase MraW [Bacillus cytotoxicus NVH 391-98]
gi|263446007|sp|A7GRP4.1|RSMH_BACCN RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|152025032|gb|ABS22802.1| S-adenosyl-methyltransferase MraW [Bacillus cytotoxicus NVH 391-98]
Length = 310
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 133/336 (39%), Positives = 183/336 (54%), Gaps = 30/336 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D T +VDCTLG GHSS ++ E I D D A+ A+
Sbjct: 4 HVTVLLEETVDGLDIKPNGT-YVDCTLGGGGHSSYLLSQLTEGGKLIAFDQDEIAIQNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
+S +G+ +K+ NFR++ L ++ + VD IL DLG+SS Q++ P
Sbjct: 63 DKFSS--YGEQFIAVKS-----NFRYLSEKLHELG----ITEVDGILFDLGVSSPQLDTP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD +A L A D++N+W ++ R+ +YGEE + KI R
Sbjct: 112 ERGFSYHHDAPLDMRMDQEAPLTAYDVVNNWSYEQLVRIFFQYGEEKFSKQIARKIEAYR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +TGELV+LI+ P RR G A RVFQA+RIAVNDELK E +L A +
Sbjct: 172 EKKKIETTGELVELIKEGIPA-PARRTGG-HPAKRVFQAIRIAVNDELKVFEEALEAAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
+ PGGR+ VI+FHSLEDRI K TF R I I E + ++
Sbjct: 230 IVKPGGRISVITFHSLEDRICKTTF------KRNSTTPELPPGLPI----IPEEFKPKL- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PI PS E N R RSAKLR+ +K
Sbjct: 279 -----KLITRKPILPSDVELEENNRARSAKLRIAEK 309
>gi|338729923|ref|YP_004659315.1| S-adenosyl-methyltransferase MraW [Thermotoga thermarum DSM 5069]
gi|335364274|gb|AEH50219.1| S-adenosyl-methyltransferase MraW [Thermotoga thermarum DSM 5069]
Length = 292
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 132/343 (38%), Positives = 190/343 (55%), Gaps = 55/343 (16%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
++ H+PVM+ EVL F I F+DCT+G GH+ A+++ E + +G+DVD ALA
Sbjct: 2 ETIHVPVMVNEVLQSFKGLNGI--FLDCTVGLGGHAEALLKNFQE-SVVVGLDVDEEALA 58
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
A+ L Q +L ++ +K++ +ID+ V ILMDLG+S++Q+
Sbjct: 59 IAKQRLAEY-EKQGRVYLFNCSYVDAVDVLKTL--KIDK------VVGILMDLGVSTLQL 109
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNW-HLLQNKI 291
ERGFS L DGPLDMRM+ SL A D++N W + E+ R++ EYGEE + + + I
Sbjct: 110 VKSERGFSFLMDGPLDMRMNKNQSLTAYDVVNKWDEDELRRIIFEYGEEKRYARRIASFI 169
Query: 292 VQARLRGGLHSTGELVDLIQSVTP--GMRGRRQGWIKTATRVFQALRIAVNDELKTLESS 349
V+ R + ST ELV +I P R R++ + AT+VFQA+RIAVN+EL+ L+
Sbjct: 170 VKNR---PISSTSELVKVIAKALPPEAKRNRKRHF---ATKVFQAIRIAVNNELENLKRF 223
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINET 409
L + L GGR+ VISFHSLEDR+VKQ F + LR
Sbjct: 224 LSFAPELLQVGGRIAVISFHSLEDRLVKQAF------------KTDSRLR---------- 261
Query: 410 WIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+LTK+P+ PS EE + N + RSAKLRV ++I
Sbjct: 262 ------------VLTKKPMVPSTEEIKNNPKSRSAKLRVAERI 292
>gi|299534665|ref|ZP_07047997.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Lysinibacillus fusiformis ZC1]
gi|424738802|ref|ZP_18167231.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Lysinibacillus fusiformis ZB2]
gi|298730038|gb|EFI70581.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Lysinibacillus fusiformis ZC1]
gi|422947286|gb|EKU41683.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Lysinibacillus fusiformis ZB2]
Length = 316
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 134/343 (39%), Positives = 186/343 (54%), Gaps = 42/343 (12%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + +VDCTLG AGHS +++ + I D D +A+ A+
Sbjct: 4 HTTVLLKETVDGLNIDPD-GVYVDCTLGGAGHSEYLVQQLSDKGRLICFDQDMTAIENAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFA-KNFRHIKSVLGQIDENILRSG---VDAILMDLGMSSMQ 231
L P+++ TF NFR++K E +L G VD IL DLG+SS Q
Sbjct: 63 IRLA--------PYIERVTFIHSNFRYLK-------EELLAHGIKQVDGILYDLGVSSPQ 107
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ PERGFS D PLDMRMD A+L A D++N W ++ R+ YGEE + KI
Sbjct: 108 LDTPERGFSYHHDAPLDMRMDQTATLTASDVVNQWAYEDLVRIFFRYGEEKFSKQVARKI 167
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
+AR + +TG+LV+LI+ P R+ G A R+FQA+RIAVNDEL E SL
Sbjct: 168 EEARKIAPIETTGQLVELIKEGIPAAARRKGG--HPAKRIFQAIRIAVNDELGAAEDSLV 225
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRN--IRDDNINET 409
D + GGR+ VI+FHSLEDR+ K F ++A E N + D++ T
Sbjct: 226 DAIDMINVGGRISVITFHSLEDRLCKTIF--------KEASSLPELPPNLPVIPDDMKPT 277
Query: 410 WIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
K++T++PI PS EE +N R RSAKLRV++KI
Sbjct: 278 L----------KLITRKPIIPSDEELAVNNRARSAKLRVVEKI 310
>gi|30263920|ref|NP_846297.1| S-adenosyl-methyltransferase MraW [Bacillus anthracis str. Ames]
gi|47529351|ref|YP_020700.1| S-adenosyl-methyltransferase MraW [Bacillus anthracis str. 'Ames
Ancestor']
gi|52141570|ref|YP_085259.1| S-adenosyl-methyltransferase MraW [Bacillus cereus E33L]
gi|65321245|ref|ZP_00394204.1| COG0275: Predicted S-adenosylmethionine-dependent methyltransferase
involved in cell envelope biogenesis [Bacillus anthracis
str. A2012]
gi|118479138|ref|YP_896289.1| S-adenosyl-methyltransferase MraW [Bacillus thuringiensis str. Al
Hakam]
gi|165872265|ref|ZP_02216902.1| S-adenosyl-methyltransferase MraW [Bacillus anthracis str. A0488]
gi|167641107|ref|ZP_02399362.1| S-adenosyl-methyltransferase MraW [Bacillus anthracis str. A0193]
gi|170709248|ref|ZP_02899669.1| S-adenosyl-methyltransferase MraW [Bacillus anthracis str. A0389]
gi|177655554|ref|ZP_02936964.1| S-adenosyl-methyltransferase MraW [Bacillus anthracis str. A0174]
gi|190566055|ref|ZP_03018974.1| S-adenosyl-methyltransferase MraW [Bacillus anthracis str.
Tsiankovskii-I]
gi|196035938|ref|ZP_03103340.1| S-adenosyl-methyltransferase MraW [Bacillus cereus W]
gi|196038800|ref|ZP_03106108.1| S-adenosyl-methyltransferase MraW [Bacillus cereus NVH0597-99]
gi|196045790|ref|ZP_03113019.1| S-adenosyl-methyltransferase MraW [Bacillus cereus 03BB108]
gi|218905049|ref|YP_002452883.1| S-adenosyl-methyltransferase MraW [Bacillus cereus AH820]
gi|225865900|ref|YP_002751278.1| S-adenosyl-methyltransferase MraW [Bacillus cereus 03BB102]
gi|227813172|ref|YP_002813181.1| S-adenosyl-methyltransferase MraW [Bacillus anthracis str. CDC 684]
gi|228916556|ref|ZP_04080122.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228928967|ref|ZP_04091999.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228935234|ref|ZP_04098060.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228947638|ref|ZP_04109928.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|229123432|ref|ZP_04252636.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus 95/8201]
gi|229186159|ref|ZP_04313328.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus BGSC 6E1]
gi|229603937|ref|YP_002868154.1| S-adenosyl-methyltransferase MraW [Bacillus anthracis str. A0248]
gi|254721453|ref|ZP_05183242.1| S-adenosyl-methyltransferase MraW [Bacillus anthracis str. A1055]
gi|254735959|ref|ZP_05193665.1| S-adenosyl-methyltransferase MraW [Bacillus anthracis str. Western
North America USA6153]
gi|254754371|ref|ZP_05206406.1| S-adenosyl-methyltransferase MraW [Bacillus anthracis str. Vollum]
gi|254756738|ref|ZP_05208767.1| S-adenosyl-methyltransferase MraW [Bacillus anthracis str.
Australia 94]
gi|301055409|ref|YP_003793620.1| S-adenosyl-methyltransferase MraW [Bacillus cereus biovar anthracis
str. CI]
gi|376267815|ref|YP_005120527.1| rRNA small subunit methyltransferase H [Bacillus cereus F837/76]
gi|386737741|ref|YP_006210922.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
anthracis str. H9401]
gi|421507459|ref|ZP_15954379.1| 16S rRNA m(4)C1402 methyltransferase [Bacillus anthracis str. UR-1]
gi|423550333|ref|ZP_17526660.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
ISP3191]
gi|33301354|sp|Q81WC3.1|RSMH_BACAN RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|77416580|sp|Q636A8.1|RSMH_BACCZ RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|263446803|sp|C3P688.1|RSMH_BACAA RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|263446820|sp|C3L6F3.1|RSMH_BACAC RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|263446828|sp|A0RHT9.1|RSMH_BACAH RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|263446838|sp|B7JK06.1|RSMH_BACC0 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|263446859|sp|C1EPT2.1|RSMH_BACC3 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|30258564|gb|AAP27783.1| S-adenosyl-methyltransferase MraW [Bacillus anthracis str. Ames]
gi|47504499|gb|AAT33175.1| S-adenosyl-methyltransferase MraW [Bacillus anthracis str. 'Ames
Ancestor']
gi|51975039|gb|AAU16589.1| S-adenosyl-methyltransferase [Bacillus cereus E33L]
gi|118418363|gb|ABK86782.1| S-adenosyl-methyltransferase [Bacillus thuringiensis str. Al Hakam]
gi|164711941|gb|EDR17481.1| S-adenosyl-methyltransferase MraW [Bacillus anthracis str. A0488]
gi|167510887|gb|EDR86278.1| S-adenosyl-methyltransferase MraW [Bacillus anthracis str. A0193]
gi|170125855|gb|EDS94761.1| S-adenosyl-methyltransferase MraW [Bacillus anthracis str. A0389]
gi|172080083|gb|EDT65180.1| S-adenosyl-methyltransferase MraW [Bacillus anthracis str. A0174]
gi|190562974|gb|EDV16940.1| S-adenosyl-methyltransferase MraW [Bacillus anthracis str.
Tsiankovskii-I]
gi|195991587|gb|EDX55553.1| S-adenosyl-methyltransferase MraW [Bacillus cereus W]
gi|196023230|gb|EDX61908.1| S-adenosyl-methyltransferase MraW [Bacillus cereus 03BB108]
gi|196030523|gb|EDX69122.1| S-adenosyl-methyltransferase MraW [Bacillus cereus NVH0597-99]
gi|218537984|gb|ACK90382.1| S-adenosyl-methyltransferase MraW [Bacillus cereus AH820]
gi|225790748|gb|ACO30965.1| S-adenosyl-methyltransferase MraW [Bacillus cereus 03BB102]
gi|227005932|gb|ACP15675.1| S-adenosyl-methyltransferase MraW [Bacillus anthracis str. CDC 684]
gi|228597335|gb|EEK54986.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus BGSC 6E1]
gi|228660208|gb|EEL15844.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus 95/8201]
gi|228812158|gb|EEM58489.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228824399|gb|EEM70205.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228830774|gb|EEM76379.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228843135|gb|EEM88217.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|229268345|gb|ACQ49982.1| S-adenosyl-methyltransferase MraW [Bacillus anthracis str. A0248]
gi|300377578|gb|ADK06482.1| S-adenosyl-methyltransferase MraW [Bacillus cereus biovar anthracis
str. CI]
gi|364513615|gb|AEW57014.1| rRNA small subunit methyltransferase H [Bacillus cereus F837/76]
gi|384387593|gb|AFH85254.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
anthracis str. H9401]
gi|401189949|gb|EJQ96999.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
ISP3191]
gi|401822593|gb|EJT21743.1| 16S rRNA m(4)C1402 methyltransferase [Bacillus anthracis str. UR-1]
Length = 310
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 131/337 (38%), Positives = 179/337 (53%), Gaps = 30/337 (8%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
+H+ V+L E +D + ++VDCTLG GHSS ++ E I D D A+ A
Sbjct: 3 NHVTVLLKETVDGLDI-KPDGTYVDCTLGGGGHSSYLLSQLTEGGRLIAFDQDEIAIQNA 61
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+ +S +G+ +K+ NFR++ L ++ + VD IL DLG+SS Q++
Sbjct: 62 KEKFSS--YGEQFITVKS-----NFRYLSEKLQELG----ITEVDGILFDLGVSSPQLDT 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
PERGFS D PLDMRMD A L A D++NSW ++ R+ +YGEE + KI
Sbjct: 111 PERGFSYHHDAPLDMRMDQDAPLTAYDVVNSWSYEQLVRIFFQYGEEKFSKQIARKIEAY 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +TGELV+LI+ P RR G A RVFQA+RIAVNDELK E +L +
Sbjct: 171 RENKAIETTGELVELIKEGIPA-PARRTGG-HPAKRVFQAIRIAVNDELKVFEEALESAI 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
+ + PGGR+ VI+FHSLEDRI K TF R I D
Sbjct: 229 EMVKPGGRVSVITFHSLEDRICKTTF------KRNSTTPQLPPGLPIIPDEFKPKL---- 278
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PI PS E N R RSAKLR+ +K
Sbjct: 279 ------KLITRKPILPSDIELEENNRARSAKLRIAEK 309
>gi|229086483|ref|ZP_04218655.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus Rock3-44]
gi|228696800|gb|EEL49613.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus Rock3-44]
Length = 332
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 131/336 (38%), Positives = 179/336 (53%), Gaps = 30/336 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D + ++VDCTLG GHSS ++ E I D D A+ A+
Sbjct: 26 HVTVLLKETVDGLDI-KPGGTYVDCTLGGGGHSSYLLSRLTEGGKLIAFDQDEIAIQNAK 84
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
+S +G +K+ NFR++ L ++ + VD IL DLG+SS Q++ P
Sbjct: 85 EKFSS--YGDQFVTVKS-----NFRYLSEKLQELG----ITEVDGILFDLGVSSPQLDTP 133
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD ASL A +++N+W ++ R+ +YGEE + KI R
Sbjct: 134 ERGFSYHHDAPLDMRMDQDASLTAYEVVNNWSYEQLVRIFFQYGEEKFSKQIARKIEAYR 193
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +TGELV+LI+ P RR G A RVFQA+RIAVNDELK E +L +
Sbjct: 194 ENKTIETTGELVELIKEGIPA-PARRTGG-HPAKRVFQAIRIAVNDELKVFEEALESAIK 251
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
+ PGGR+ VI+FHSLEDRI K TF R + I D
Sbjct: 252 MVKPGGRVSVITFHSLEDRICKTTF------KRNSSTPQLPPGLPIIPDEFKPKL----- 300
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PI PS EE N R RSAKLR+ +K
Sbjct: 301 -----KLITRKPILPSEEELEENNRARSAKLRIAEK 331
>gi|42783012|ref|NP_980259.1| S-adenosyl-methyltransferase MraW [Bacillus cereus ATCC 10987]
gi|47565791|ref|ZP_00236830.1| S-adenosyl-methyltransferase MraW [Bacillus cereus G9241]
gi|222097364|ref|YP_002531421.1| s-adenosyl-methyltransferase mraw [Bacillus cereus Q1]
gi|228987063|ref|ZP_04147188.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|229157497|ref|ZP_04285574.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus ATCC 4342]
gi|384181734|ref|YP_005567496.1| 16S rRNA m(4)C1402 methyltranserfase [Bacillus thuringiensis
serovar finitimus YBT-020]
gi|402555957|ref|YP_006597228.1| 16S rRNA m(4)C1402 methyltransferase [Bacillus cereus FRI-35]
gi|88911698|sp|P62468.1|RSMH_BACC1 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|263447274|sp|B9IVZ5.1|RSMH_BACCQ RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|42738939|gb|AAS42867.1| S-adenosyl-methyltransferase MraW [Bacillus cereus ATCC 10987]
gi|47557071|gb|EAL15400.1| S-adenosyl-methyltransferase MraW [Bacillus cereus G9241]
gi|221241422|gb|ACM14132.1| S-adenosyl-methyltransferase MraW [Bacillus cereus Q1]
gi|228625947|gb|EEK82697.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus ATCC 4342]
gi|228772657|gb|EEM21098.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|324327818|gb|ADY23078.1| 16S rRNA m(4)C1402 methyltranserfase [Bacillus thuringiensis
serovar finitimus YBT-020]
gi|401797167|gb|AFQ11026.1| 16S rRNA m(4)C1402 methyltransferase [Bacillus cereus FRI-35]
Length = 310
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 131/337 (38%), Positives = 179/337 (53%), Gaps = 30/337 (8%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
+H+ V+L E +D + ++VDCTLG GHSS ++ E I D D A+ A
Sbjct: 3 NHVTVLLKETVDGLDI-KPGGTYVDCTLGGGGHSSYLLSQLTEGGRLIAFDQDEIAIQNA 61
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+ +S +G+ +K+ NFR++ L ++ + VD IL DLG+SS Q++
Sbjct: 62 KEKFSS--YGEQFITVKS-----NFRYLSEKLQELG----ITEVDGILFDLGVSSPQLDT 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
PERGFS D PLDMRMD A L A D++NSW ++ R+ +YGEE + KI
Sbjct: 111 PERGFSYHHDAPLDMRMDQDAPLTAYDVVNSWSYEQLVRIFFQYGEEKFSKQIARKIEAY 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +TGELV+LI+ P RR G A RVFQA+RIAVNDELK E +L +
Sbjct: 171 RENKAIETTGELVELIKEGIPA-PARRTGG-HPAKRVFQAIRIAVNDELKVFEEALESAI 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
+ + PGGR+ VI+FHSLEDRI K TF R I D
Sbjct: 229 EMVKPGGRVSVITFHSLEDRICKTTF------KRNSTTPQLPPGLPIIPDEFKPKL---- 278
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PI PS E N R RSAKLR+ +K
Sbjct: 279 ------KLITRKPILPSDIELEENNRARSAKLRIAEK 309
>gi|328957120|ref|YP_004374506.1| S-adenosyl-methyltransferase MraW [Carnobacterium sp. 17-4]
gi|328673444|gb|AEB29490.1| S-adenosyl-methyltransferase MraW [Carnobacterium sp. 17-4]
Length = 318
Score = 201 bits (510), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 141/341 (41%), Positives = 184/341 (53%), Gaps = 36/341 (10%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
+H V+L E +D S S +VDCTLG AGHS ++ E D D A+ A
Sbjct: 5 NHETVLLRETVDGLSLSPE-GIYVDCTLGGAGHSEYLLSQLDENGHLFAFDQDERAIENA 63
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQ--IDENILRSGVDAILMDLGMSSMQV 232
+ L + +K NFR+IK L + I+E VD IL DLG+SS Q+
Sbjct: 64 KVRLAEYVEKGMVTFIKA-----NFRNIKEELTERGINE------VDGILYDLGVSSPQL 112
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ ERGFS D PLDMRMD A L A+D++N W ++ R+ YGEE + KI
Sbjct: 113 DEAERGFSYHQDAPLDMRMDTDAPLTAKDVVNEWSYHDLIRIFYRYGEEKFSKQIARKIE 172
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
AR + +T ELV+LI+S P R+ G A RVFQA+RIAVNDEL ++E SL
Sbjct: 173 AAREIKPIETTSELVELIKSGIPAPARRKGG--HPAKRVFQAIRIAVNDELSSVEDSLEQ 230
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNR--EDAEGNEEELRNIRDDNINETW 410
+ LA GGR+ VISFHSLEDRIVK F DH++ E G L I D + E
Sbjct: 231 AIELLAIGGRISVISFHSLEDRIVKTIFK---DHSKGPELPRG----LPVIPDGFLPEL- 282
Query: 411 IRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PI PS EE +N R RSAKLR+ +K
Sbjct: 283 ----------KLITRKPILPSEEELAVNNRSRSAKLRIAEK 313
>gi|423470132|ref|ZP_17446876.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
BAG6O-2]
gi|402437384|gb|EJV69408.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
BAG6O-2]
Length = 310
Score = 201 bits (510), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 131/336 (38%), Positives = 178/336 (52%), Gaps = 30/336 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D + T +VDCTLG GHSS ++ + I D D A+ A+
Sbjct: 4 HVTVLLKETVDGLDIKPSGT-YVDCTLGGGGHSSYLLSQLTDGGKLIAFDQDEIAIQNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
+S +G+ +K+ NFR++ L ++ + VD IL DLG+SS Q++ P
Sbjct: 63 EKFSS--YGEQFVTVKS-----NFRYLSEKLHELG----ITEVDGILFDLGVSSPQLDTP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD A L A D++NSW ++ R+ +YGEE + KI R
Sbjct: 112 ERGFSYHHDAPLDMRMDQDAPLTAYDVVNSWSYEQLVRIFFQYGEEKFSKQITRKIEAYR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +TGELV+LI+ P RR G A RVFQA+RIAVNDELK E +L +
Sbjct: 172 ENKAIETTGELVELIKEGIPA-PARRTGG-HPAKRVFQAIRIAVNDELKVFEEALESAIG 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
+ PGGR+ VI+FHSLEDRI K TF R + I D
Sbjct: 230 MVKPGGRVSVITFHSLEDRICKTTF------KRNSTTPQLPQGLPIIPDEFKPKL----- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PI PS E N R RSAKLR+ +K
Sbjct: 279 -----KLITRKPILPSDIELEENNRARSAKLRIAEK 309
>gi|387927136|ref|ZP_10129815.1| S-adenosyl-methyltransferase MraW [Bacillus methanolicus PB1]
gi|387589280|gb|EIJ81600.1| S-adenosyl-methyltransferase MraW [Bacillus methanolicus PB1]
Length = 310
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 129/320 (40%), Positives = 173/320 (54%), Gaps = 37/320 (11%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
+VDCTLG AGHS I++ D D +A+A A+ L +G+ K
Sbjct: 24 YVDCTLGGAGHSELILKQLTGKGKLFAFDQDETAIAHAKVKLAP--YGE-----KITIIK 76
Query: 197 KNFRHIKSVLGQ--IDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQ 254
NF +I++ L + ID+ VD +L DLG+SS Q++NPERGFS + PLDMRMD
Sbjct: 77 SNFLYIEAELSKFGIDK------VDGVLYDLGVSSPQLDNPERGFSYHHNAPLDMRMDKD 130
Query: 255 ASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVT 314
A L A DI+N WP ++ R+ +YGEE + KI AR + +TGELVD+I+
Sbjct: 131 ADLSAFDIINHWPYEDLVRIFFQYGEEKFSKQIARKIEIARAEKAIKTTGELVDIIKDAI 190
Query: 315 PGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDR 374
P R+ G A R+FQA+RIAVNDEL E SL + L GGR+ VI+FHSLEDR
Sbjct: 191 PAPARRKGGH--PAKRIFQAVRIAVNDELGVFEKSLQKSINLLKKGGRICVITFHSLEDR 248
Query: 375 IVKQTFLSIIDHNREDAEGNEEELRNIRD--DNINETWIRQIIQGWNGKILTKRPITPSA 432
I K F N E N+ I E + ++ K++T++PI PS
Sbjct: 249 ICKTVF------------KNASEAPNLPPGLPMIPEEFKPKM------KLITRKPIVPSE 290
Query: 433 EEERLNCRCRSAKLRVIQKI 452
E N R RSAKLRV +K+
Sbjct: 291 RELVQNSRARSAKLRVAEKL 310
>gi|404495261|ref|YP_006719367.1| 16S rRNA m(4)C1402 methyltransferase [Geobacter metallireducens
GS-15]
gi|418065728|ref|ZP_12703099.1| S-adenosyl-methyltransferase MraW [Geobacter metallireducens RCH3]
gi|123572785|sp|Q39YM7.1|RSMH_GEOMG RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|78192880|gb|ABB30647.1| 16S rRNA (N4-methyl-C1402)-methyltransferase [Geobacter
metallireducens GS-15]
gi|373561808|gb|EHP88034.1| S-adenosyl-methyltransferase MraW [Geobacter metallireducens RCH3]
Length = 313
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 138/344 (40%), Positives = 183/344 (53%), Gaps = 43/344 (12%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ VM EVL + S R +VD TLG AGH+ I+ A + +G D DP ALA A
Sbjct: 6 HLSVMPAEVLALLSP-RPGGVYVDGTLGGAGHARMILEASSPDGVLVGFDRDPEALAAAS 64
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAI---LMDLGMSSMQV 232
+ S F R ++S +DE++ G+D I L+DLG+SS Q+
Sbjct: 65 KRIAS--------------FGDRVRLVRSNFAAMDESLATLGIDTIDGFLLDLGVSSHQL 110
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ ERGFS D PLDMRMDP+ A D++N E+ R++REYGEE + + +V
Sbjct: 111 DTAERGFSFQVDAPLDMRMDPETGETAADLVNELSADELARIIREYGEERWAKRIASFVV 170
Query: 293 QARLR-GGLHSTGELVDLIQSVTPGMRGRRQGW---IKTATRVFQALRIAVNDELKTLES 348
+AR + G + ST +LVD ++ P R W I ATR FQALRIAVNDEL +LE
Sbjct: 171 KAREQHGPIESTLQLVDCVKGAIP-----RAAWEERIHPATRTFQALRIAVNDELGSLER 225
Query: 349 SLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE 408
L A + LAPGGR VISFHSLEDRIVK F R A+G R N+
Sbjct: 226 GLVAGIERLAPGGRGVVISFHSLEDRIVKTVF-------RRYAQGCTCPKMLPRCVCGNK 278
Query: 409 TWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+R ILT +P+ +E N R RSAK+R ++K+
Sbjct: 279 PRVR---------ILTGKPVMAGGDEVATNPRARSAKVRAVEKL 313
>gi|256827376|ref|YP_003151335.1| S-adenosyl-methyltransferase MraW [Cryptobacterium curtum DSM
15641]
gi|256583519|gb|ACU94653.1| S-adenosyl-methyltransferase MraW [Cryptobacterium curtum DSM
15641]
Length = 321
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 135/341 (39%), Positives = 188/341 (55%), Gaps = 33/341 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HIPV+L E LD + T ++VD TLG AGHS + +G+D D AL AR
Sbjct: 10 HIPVLLTECLD-YLRLETGRTYVDATLGGAGHSIEAAKHIQTAGTLVGIDQDEVALTAAR 68
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRS---GVDAILMDLGMSSMQV 232
L +L + P L ++ G +DE +L++ VDA L DLG+SS+Q+
Sbjct: 69 TRLLALPTDK-RPELCL---------LRGNFGDMDELLLQADIPSVDAFLFDLGVSSVQI 118
Query: 233 NNPERGFSVLGDGPLDMRMDP-QASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
+ P RGFS PLDMRMDP +++L A +I+N++ A++ R++R Y +E + + I
Sbjct: 119 DTPSRGFSFKEKAPLDMRMDPGKSTLTAAEIINTYNAADLARIIRTYSDERWATRIADFI 178
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
VQAR + ++ +LVD+I++ P RR G A R FQALRI VN EL L+ L
Sbjct: 179 VQARTHARIETSDQLVDIIKAAIPA-SARRSGG-HPAKRTFQALRIEVNSELDVLQQGLE 236
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
A LAPGGRL VIS+HSLEDRIVK+TFL +L N+
Sbjct: 237 AAIRWLAPGGRLAVISYHSLEDRIVKETFLRF-----SRGCTCPPDLPVCVCGNV----- 286
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
II K++T++P+ P+ EE N R RSAKLRV +K+
Sbjct: 287 -PII-----KVITRKPVLPTPEEIERNPRARSAKLRVAEKL 321
>gi|334133944|ref|ZP_08507479.1| S-adenosyl-methyltransferase MraW [Paenibacillus sp. HGF7]
gi|333608452|gb|EGL19749.1| S-adenosyl-methyltransferase MraW [Paenibacillus sp. HGF7]
Length = 318
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 135/322 (41%), Positives = 173/322 (53%), Gaps = 35/322 (10%)
Query: 137 FVDCTLGAAGHSSAII-RAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTF 195
+VDCTLG AGHSS I R PE L I +D D +ALA A H A +
Sbjct: 26 YVDCTLGGAGHSSLIASRLGPE-GLLIALDQDDAALANAE-------HILAPYRDRVKIV 77
Query: 196 AKNFRHIKSVLGQIDENILRSG---VDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMD 252
NFR I+ VL + + R G V+ IL DLG+SS Q++ ERGFS + LDMRMD
Sbjct: 78 KTNFRRIEEVL-RDEPRAFRDGAPQVNGILFDLGVSSPQLDEAERGFSYHQEAELDMRMD 136
Query: 253 PQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQS 312
L A+ I+N WP+AE+ R+L YGEE + IV+AR G + +T +LV+LI+
Sbjct: 137 RSTELTAKIIVNEWPEAEIARILFVYGEEKFSRRIAGAIVRARADGPIETTSQLVELIKE 196
Query: 313 VTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLE 372
P RR G A R FQALRIAVNDEL E +LH CLAPGGR+ VI+FHSLE
Sbjct: 197 GIPAA-ARRTGG-HPAKRSFQALRIAVNDELGAFEDALHQSVRCLAPGGRISVITFHSLE 254
Query: 373 DRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNG--KILTKRPITP 430
DRI KQ F S + + + G G K++ ++PIT
Sbjct: 255 DRICKQIFSSYVGRCTCPPD------------------FPMCVCGNTGVVKLVNRKPITA 296
Query: 431 SAEEERLNCRCRSAKLRVIQKI 452
+ E N R RSAKLR+ +K+
Sbjct: 297 GSAELEHNTRARSAKLRIAEKL 318
>gi|339444535|ref|YP_004710539.1| hypothetical protein EGYY_09510 [Eggerthella sp. YY7918]
gi|338904287|dbj|BAK44138.1| hypothetical protein EGYY_09510 [Eggerthella sp. YY7918]
Length = 322
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 138/345 (40%), Positives = 192/345 (55%), Gaps = 33/345 (9%)
Query: 111 QQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSA 170
+Q HIPV+L E L+ + + +T +FVD TLG AGHS + +G+D D A
Sbjct: 6 RQTFKHIPVLLAECLE-YLNLKTQHTFVDATLGGAGHSFEAAKLIGCEGTLVGIDQDEMA 64
Query: 171 LAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENIL---RSGVDAILMDLGM 227
L+ AR L +L PHL+ ++ G +DE +L GVDAIL DLG+
Sbjct: 65 LSAARHKLGTL-PDDVRPHLEL---------VRGNFGDMDEALLGVEVPGVDAILFDLGV 114
Query: 228 SSMQVNNPERGFSVLGDGPLDMRMDP-QASLKAEDILNSWPDAEVGRVLREYGEESNWHL 286
SS Q++ P RGFS +GPLDMRMDP + +L A +I+N++ A++ R++R Y +E
Sbjct: 115 SSTQIDLPSRGFSFKENGPLDMRMDPGKQTLTAAEIINTYNAADLTRIIRMYSDEKWASR 174
Query: 287 LQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTL 346
+ + +V+AR + ++G+LV+LI++ P RR G A R FQALRI VN EL L
Sbjct: 175 IADFVVRARQNAPIETSGQLVELIKAAIPA-SARRAGG-HPAKRTFQALRIEVNGELDVL 232
Query: 347 ESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNI 406
L A L PGGRL VIS+HSLEDRIVK+TF S NR D +
Sbjct: 233 RRGLDAAVRWLNPGGRLVVISYHSLEDRIVKETFNSF--ANRCTCPP---------DLPV 281
Query: 407 NETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ I+ I+T++P+ P+ +E N R RSAKLRV QK
Sbjct: 282 CVCGKQPILD-----IITRKPVLPTEDEIARNPRARSAKLRVAQK 321
>gi|423604454|ref|ZP_17580347.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
VD102]
gi|401245074|gb|EJR51432.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
VD102]
Length = 310
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 131/337 (38%), Positives = 178/337 (52%), Gaps = 30/337 (8%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
+H+ V+L E +D + ++VDCTLG GHSS ++ E I D D A+ A
Sbjct: 3 NHVTVLLKETVDGLDI-KPGGTYVDCTLGGGGHSSYLLSQLTEGGRLIAFDQDEIAIQNA 61
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+ +S +G+ + T NFR++ L ++ + VD IL DLG+SS Q++
Sbjct: 62 KEKFSS--YGE-----QFITVRSNFRYLSEKLQELG----ITEVDGILFDLGVSSPQLDT 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
PERGFS D PLDMRMD A L A D++NSW ++ R+ +YGEE + KI
Sbjct: 111 PERGFSYHHDAPLDMRMDQDAPLTAYDVVNSWSYEQLVRIFFQYGEEKFSKQIARKIEAY 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +TGELV+LI+ P RR G A RVFQA+RIAVNDELK E +L +
Sbjct: 171 RENKAIETTGELVELIKEGIPAP-ARRTGG-HPAKRVFQAIRIAVNDELKVFEEALESAI 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
+ + PGGR+ VI+FHSLEDRI K TF R I D
Sbjct: 229 EMVKPGGRVSVITFHSLEDRICKTTF------KRNSTTPQLPPGLPIIPDEFKPKL---- 278
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PI PS E N R RSAKLR+ +K
Sbjct: 279 ------KLITRKPILPSEIELEENNRARSAKLRIAEK 309
>gi|39998167|ref|NP_954118.1| 16S rRNA m(4)C1402 methyltransferase [Geobacter sulfurreducens PCA]
gi|409913524|ref|YP_006891989.1| 16S rRNA (N4-methyl-C1402)-methyltransferase [Geobacter
sulfurreducens KN400]
gi|42559425|sp|P60396.1|RSMH_GEOSL RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|39985113|gb|AAR36468.1| 16S rRNA (N4-methyl-C1402)-methyltransferase [Geobacter
sulfurreducens PCA]
gi|298507105|gb|ADI85828.1| 16S rRNA (N4-methyl-C1402)-methyltransferase [Geobacter
sulfurreducens KN400]
Length = 311
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 139/339 (41%), Positives = 183/339 (53%), Gaps = 32/339 (9%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
SH PVM EVL+ + S R +VD TLG AGH+ I+ A + IG D DP+AL A
Sbjct: 4 SHRPVMPAEVLE-YLSPRPGGVYVDGTLGGAGHARLILEATSPDGMLIGFDRDPAALEVA 62
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
R L L G+ + NF + VL ++ + GVD L+D+G+SS Q++
Sbjct: 63 RERLA--LFGE-----RFRPVPGNFSEMGRVLAELGVD----GVDGFLLDVGVSSHQLDT 111
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS L D PLDMRM+ A D++N + E+ R+++EYGEE + + IV+A
Sbjct: 112 AERGFSFLTDAPLDMRMNTLVPGTAADLVNDLNEHELARIIKEYGEERWARRIASFIVKA 171
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R+ G + T +LVD+I+ P RG + I ATR FQALRIAVNDEL +LE L +
Sbjct: 172 RVDGPIERTLQLVDIIKGAIP--RGAWEERIHPATRTFQALRIAVNDELGSLERGLESAL 229
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
L PGGR VISFHSLEDRIVK F R A+G + R +
Sbjct: 230 GLLRPGGRGVVISFHSLEDRIVKTMF-------RRYAQGC----------TCPKELPRCV 272
Query: 415 IQGW-NGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
G +ILT RP+ E N R RSAKLR +K+
Sbjct: 273 CGGVPRLRILTGRPVVAGDVEVAENPRARSAKLRAAEKL 311
>gi|423401239|ref|ZP_17378412.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
BAG2X1-2]
gi|423478057|ref|ZP_17454772.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
BAG6X1-1]
gi|401654229|gb|EJS71772.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
BAG2X1-2]
gi|402428219|gb|EJV60316.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
BAG6X1-1]
Length = 310
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 131/336 (38%), Positives = 178/336 (52%), Gaps = 30/336 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D + ++VDCTLG GHSS ++ E I D D A+ A+
Sbjct: 4 HVTVLLKETVDGLDI-KPGGTYVDCTLGGGGHSSYLLSQLTEGGRLIAFDQDEIAIQNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
+S +G+ +K+ NFR++ L ++ + VD IL DLG+SS Q++ P
Sbjct: 63 ERFSS--YGEQFITVKS-----NFRYLSEKLQELG----ITEVDGILFDLGVSSPQLDTP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD A L A D++NSW ++ R+ +YGEE + KI R
Sbjct: 112 ERGFSYHHDAPLDMRMDQDAPLTAYDVVNSWSYEQLVRIFFQYGEEKFSKQIVRKIEAYR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +TGELV+LI+ P RR G A RVFQA+RIAVNDELK E +L + +
Sbjct: 172 ENKAIETTGELVELIKEGIPA-PARRTGG-HPAKRVFQAIRIAVNDELKVFEEALESAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
+ PGGR+ VI+FHSLEDRI K TF R I D
Sbjct: 230 MVKPGGRVSVITFHSLEDRICKTTF------KRNSTTPQLPPGLPIIPDEFKPKL----- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PI PS E N R RSAKLR+ +K
Sbjct: 279 -----KLITRKPILPSDIELEENNRARSAKLRIAEK 309
>gi|229031550|ref|ZP_04187550.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus AH1271]
gi|228729839|gb|EEL80819.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus AH1271]
Length = 310
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 130/336 (38%), Positives = 178/336 (52%), Gaps = 30/336 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D + ++VDCTLG GHSS ++ E I D D A+ A+
Sbjct: 4 HVTVLLKETVDGLDI-KPGGTYVDCTLGGGGHSSYLLSQLTEGGKLIAFDQDEIAIQNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
+S +G+ +K+ NFR++ L ++ + VD IL DLG+SS Q++ P
Sbjct: 63 EKFSS--YGEQFITVKS-----NFRYLSEKLQELG----ITEVDGILFDLGVSSPQLDTP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD A L A D++NSW ++ R+ +YGEE + KI R
Sbjct: 112 ERGFSYHHDAPLDMRMDQDAPLTAYDVVNSWSYEQLVRIFFQYGEEKFSKQIARKIEAYR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +T ELV+LI+ P RR G A RVFQA+RIAVNDELK E +L + +
Sbjct: 172 ENKAIETTAELVELIKEGIPA-PARRTGG-HPAKRVFQAIRIAVNDELKVFEEALESAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
+ PGGR+ VI+FHSLEDRI K TF R + I D
Sbjct: 230 MVKPGGRVSVITFHSLEDRICKTTF------KRNSTTPQLPQGLPIIPDEFKPKL----- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PI PS E N R RSAKLR+ +K
Sbjct: 279 -----KLITRKPILPSDIELEENNRARSAKLRIAEK 309
>gi|212639664|ref|YP_002316184.1| S-adenosylmethionine-dependent methyltransferase involved in cell
envelope biogenesis [Anoxybacillus flavithermus WK1]
gi|263446761|sp|B7GGJ0.1|RSMH_ANOFW RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|212561144|gb|ACJ34199.1| Predicted S-adenosylmethionine-dependent methyltransferase involved
in cell envelope biogenesis [Anoxybacillus flavithermus
WK1]
Length = 313
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 133/339 (39%), Positives = 184/339 (54%), Gaps = 34/339 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAII-RAHPELKLHIGVDVDPSALAKA 174
H+ V+L E +D + + T +VDCTLG AGHS ++ + PE +L D D A+ A
Sbjct: 7 HVTVLLKETVDGLNIKKDGT-YVDCTLGGAGHSEYLLSQLSPEGRL-FAFDQDDIAIRHA 64
Query: 175 RAHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
+ L GQ T K NFR++K L + VD IL DLG+SS Q++
Sbjct: 65 QQRLERY-RGQ-------FTIIKSNFRYLKQQLALYGVH----EVDGILFDLGVSSPQLD 112
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
PERGFS + PLDMRMD + +L A D++N+WP ++ ++ +YGEE + KI Q
Sbjct: 113 MPERGFSYQHEAPLDMRMDREQTLTAYDVVNTWPYEQLVKIFFQYGEEKFSKAIARKIEQ 172
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
R + + +T EL ++I+ P RR G A RVFQA+RIAVNDEL+ E ++
Sbjct: 173 TRKQKPIETTTELAEVIKEAIPAP-ARRTGG-HPAKRVFQAIRIAVNDELRAFEEAIEQA 230
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
D L PGGR+ VI+FHSLEDRI K F + L I D+ +
Sbjct: 231 IDLLKPGGRISVITFHSLEDRICKIAF-----KQASETPHLPPGLPIIPDEYKPKL---- 281
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
KI+TK+PI PS EE + N R RSAKLR+ +K+
Sbjct: 282 -------KIITKKPIVPSEEELQHNHRARSAKLRIAEKL 313
>gi|194335059|ref|YP_002016919.1| S-adenosyl-methyltransferase MraW [Prosthecochloris aestuarii DSM
271]
gi|262824884|sp|B4S6R7.1|RSMH_PROA2 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|194312877|gb|ACF47272.1| S-adenosyl-methyltransferase MraW [Prosthecochloris aestuarii DSM
271]
Length = 333
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/352 (37%), Positives = 192/352 (54%), Gaps = 44/352 (12%)
Query: 111 QQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRA-----HPELKLHIGVD 165
+ H+PVM+ EV D+ + I ++D TLG GH+ +++ A L IG+D
Sbjct: 2 EHDGYHLPVMVSEVTDLLARRPGI--YIDGTLGGGGHAFSVMSALRRSGFENDSLLIGID 59
Query: 166 VDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG----VDAI 221
D AL +A L + NF + +++ +I LR G V I
Sbjct: 60 QDSFALEEAAGRLRPFAS-------RVRLERGNFSEMAAIIERIR---LREGCRLPVMGI 109
Query: 222 LMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEE 281
L+DLG+SS Q++ P+RGFS L GPLDMRMDP A DI+N+ ++E+ ++ YGEE
Sbjct: 110 LLDLGVSSFQIDTPDRGFSYLRQGPLDMRMDPDGGWSAADIVNTAEESELAGIIYRYGEE 169
Query: 282 SNWHLLQNKI-VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVN 340
+ I + R +G T EL +++SV G RQ IK+ +RVFQALRIAVN
Sbjct: 170 KKSRAIARAIKARVREKGDFRETAELAAVVRSVVAGHD--RQ--IKSLSRVFQALRIAVN 225
Query: 341 DELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRN 400
DEL LES+L CLAP GR+GV+S+HSLEDR+VK+ F R+ +E
Sbjct: 226 DELGVLESALEDGTACLAPSGRMGVMSYHSLEDRMVKRFF-------RDKSE-------- 270
Query: 401 IRDD-NINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
DD +R+ ++ K++T++ + S +E R+N R RSA+LRVI+K
Sbjct: 271 --DDWGPKGVGLREPLRSAGFKLVTRKSVVASDDEVRINPRARSARLRVIEK 320
>gi|229117415|ref|ZP_04246791.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus Rock1-3]
gi|423378229|ref|ZP_17355513.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
BAG1O-2]
gi|423547216|ref|ZP_17523574.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
HuB5-5]
gi|228666025|gb|EEL21491.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus Rock1-3]
gi|401178937|gb|EJQ86110.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
HuB5-5]
gi|401636495|gb|EJS54249.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
BAG1O-2]
Length = 310
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 130/336 (38%), Positives = 178/336 (52%), Gaps = 30/336 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D + ++VDCTLG GHSS ++ + I D D A+ A+
Sbjct: 4 HVTVLLKETVDGLDI-KPDGTYVDCTLGGGGHSSYLLSQLTDGGKLIAFDQDEIAIQNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
+S +G+ +K+ NFR++ L ++ + VD IL DLG+SS Q++ P
Sbjct: 63 EKFSS--YGEQFITVKS-----NFRYLSEKLQELG----ITEVDGILFDLGVSSPQLDTP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD A L A D++NSW ++ R+ +YGEE + KI R
Sbjct: 112 ERGFSYHHDAPLDMRMDQDAPLTAYDVINSWSYEQLVRIFFQYGEEKFSKQIARKIEAYR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +TGELV+LI+ P RR G A RVFQA+RIAVNDELK E +L + +
Sbjct: 172 ENKAIETTGELVELIKEGIPA-PARRTGG-HPAKRVFQAIRIAVNDELKVFEEALESAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
+ PGGR+ VI+FHSLEDRI K TF R I D
Sbjct: 230 LVKPGGRVSVITFHSLEDRICKTTF------KRNSTTPQLPPGLPIIPDEFKPKL----- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PI PS E N R RSAKLR+ +K
Sbjct: 279 -----KLITRKPILPSDIELEENNRARSAKLRIAEK 309
>gi|229075675|ref|ZP_04208657.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus Rock4-18]
gi|229098389|ref|ZP_04229334.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus Rock3-29]
gi|407706376|ref|YP_006829961.1| protein-glutamine gamma-glutamyltransferase [Bacillus thuringiensis
MC28]
gi|423441350|ref|ZP_17418256.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
BAG4X2-1]
gi|423448424|ref|ZP_17425303.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
BAG5O-1]
gi|423464424|ref|ZP_17441192.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
BAG6O-1]
gi|423533766|ref|ZP_17510184.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
HuB2-9]
gi|423540978|ref|ZP_17517369.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
HuB4-10]
gi|423615818|ref|ZP_17591652.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
VD115]
gi|423623002|ref|ZP_17598780.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
VD148]
gi|228685006|gb|EEL38939.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus Rock3-29]
gi|228707451|gb|EEL59642.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus Rock4-18]
gi|401129018|gb|EJQ36701.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
BAG5O-1]
gi|401172166|gb|EJQ79387.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
HuB4-10]
gi|401259775|gb|EJR65949.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
VD148]
gi|401260355|gb|EJR66528.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
VD115]
gi|402418011|gb|EJV50311.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
BAG4X2-1]
gi|402420691|gb|EJV52962.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
BAG6O-1]
gi|402463985|gb|EJV95685.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
HuB2-9]
gi|407384061|gb|AFU14562.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
thuringiensis MC28]
Length = 310
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 130/336 (38%), Positives = 178/336 (52%), Gaps = 30/336 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D + ++VDCTLG GHSS ++ + I D D A+ A+
Sbjct: 4 HVTVLLKETVDGLDI-KPDGTYVDCTLGGGGHSSYLLSQLTDGGKLIAFDQDEIAIQNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
+S +G+ +K+ NFR++ L ++ + VD IL DLG+SS Q++ P
Sbjct: 63 EKFSS--YGEQFITVKS-----NFRYLSEKLQELG----ITEVDGILFDLGVSSPQLDTP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD A L A D++NSW ++ R+ +YGEE + KI R
Sbjct: 112 ERGFSYHHDAPLDMRMDQDAPLTAYDVINSWSYEQLVRIFFQYGEEKFSKQIARKIEAYR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +TGELV+LI+ P RR G A RVFQA+RIAVNDELK E +L + +
Sbjct: 172 ENKAIETTGELVELIKEGIPA-PARRTGG-HPAKRVFQAIRIAVNDELKVFEEALESAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
+ PGGR+ VI+FHSLEDRI K TF R I D
Sbjct: 230 MVKPGGRVSVITFHSLEDRICKTTF------KRNSTTPQLPPGLPIIPDEFKPKL----- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PI PS E N R RSAKLR+ +K
Sbjct: 279 -----KLITRKPILPSDIELEENNRARSAKLRIAEK 309
>gi|261419308|ref|YP_003252990.1| S-adenosyl-methyltransferase MraW [Geobacillus sp. Y412MC61]
gi|297530722|ref|YP_003671997.1| S-adenosyl-methyltransferase MraW [Geobacillus sp. C56-T3]
gi|319766124|ref|YP_004131625.1| S-adenosyl-methyltransferase MraW [Geobacillus sp. Y412MC52]
gi|261375765|gb|ACX78508.1| S-adenosyl-methyltransferase MraW [Geobacillus sp. Y412MC61]
gi|297253974|gb|ADI27420.1| S-adenosyl-methyltransferase MraW [Geobacillus sp. C56-T3]
gi|317110990|gb|ADU93482.1| S-adenosyl-methyltransferase MraW [Geobacillus sp. Y412MC52]
Length = 310
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 134/338 (39%), Positives = 181/338 (53%), Gaps = 32/338 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAII-RAHPELKLHIGVDVDPSALAKA 174
H V+L E +D + R +VDCTLG GHS ++ R KL D D +A+ A
Sbjct: 4 HTTVLLKEAVDGLNI-RPDGIYVDCTLGGGGHSEYLLSRLSARGKL-FAFDQDEAAIMHA 61
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
R L +G+ + +NFR ++ L + VD +L DLG+SS Q++
Sbjct: 62 RERLAR--YGR-----QVQFVHRNFRFLQEELSALGVK----SVDGVLFDLGVSSPQLDE 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
PERGFS D PLDMRMD + L A +I+N WP E+ R+ YGEE + KI +
Sbjct: 111 PERGFSYQHDAPLDMRMDRKQRLTAAEIVNRWPYEELVRIFFRYGEEKFSKQVARKIEEV 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +TGELVD+I+ P RR G A R+FQALRIAVNDEL+ +L
Sbjct: 171 RRTRPIKTTGELVDVIKEAIPAP-ARRSGG-HPAKRIFQALRIAVNDELEAFREALEQAI 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
+ LA GGR+ VI+FHSLEDRI K+TF ++ L + DD R +
Sbjct: 229 ELLASGGRVSVITFHSLEDRICKETF-----KKASESPPLPPGLPVLPDD------YRPV 277
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ KI+TK+PI PS EE N R RSAKLR+ +K+
Sbjct: 278 L-----KIITKKPIVPSEEELERNRRARSAKLRIAEKL 310
>gi|423558519|ref|ZP_17534821.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
MC67]
gi|401191787|gb|EJQ98809.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
MC67]
Length = 310
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 131/336 (38%), Positives = 178/336 (52%), Gaps = 30/336 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D + T +VDCTLG GHSS ++ + I D D A+ A+
Sbjct: 4 HVTVLLKETVDGLDIKPSGT-YVDCTLGGGGHSSYLLSQLTDGGKLIAFDQDEIAIQNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
+S +G+ +K+ NFR++ L ++ + VD IL DLG+SS Q++ P
Sbjct: 63 EKFSS--YGEQFVTVKS-----NFRYLSEKLHELG----ITEVDGILFDLGVSSPQLDTP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD A L A D++NSW ++ R+ +YGEE + KI R
Sbjct: 112 ERGFSYHHDAPLDMRMDQDAPLTAYDVVNSWSYEQLVRIFFQYGEEKFSKQIVRKIEAYR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +TGELV+LI+ P RR G A RVFQA+RIAVNDELK E +L +
Sbjct: 172 ENKAIETTGELVELIKEGIPA-PARRTGG-HPAKRVFQAIRIAVNDELKVFEEALESAIG 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
+ PGGR+ VI+FHSLEDRI K TF R + I D
Sbjct: 230 MVKPGGRVSVITFHSLEDRICKTTF------KRNSTTPQLPQGLPIIPDEFKPKL----- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PI PS E N R RSAKLR+ +K
Sbjct: 279 -----KLITRKPILPSDIELEENNRARSAKLRIAEK 309
>gi|206976726|ref|ZP_03237630.1| S-adenosyl-methyltransferase MraW [Bacillus cereus H3081.97]
gi|217961340|ref|YP_002339908.1| S-adenosyl-methyltransferase MraW [Bacillus cereus AH187]
gi|229140568|ref|ZP_04269123.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus BDRD-ST26]
gi|229198030|ref|ZP_04324744.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus m1293]
gi|375285844|ref|YP_005106283.1| S-adenosyl-methyltransferase MraW [Bacillus cereus NC7401]
gi|423353622|ref|ZP_17331249.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
IS075]
gi|423374284|ref|ZP_17351622.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
AND1407]
gi|423567185|ref|ZP_17543432.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
MSX-A12]
gi|423574475|ref|ZP_17550594.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
MSX-D12]
gi|263447288|sp|B7HM39.1|RSMH_BACC7 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|206745036|gb|EDZ56439.1| S-adenosyl-methyltransferase MraW [Bacillus cereus H3081.97]
gi|217067703|gb|ACJ81953.1| S-adenosyl-methyltransferase MraW [Bacillus cereus AH187]
gi|228585509|gb|EEK43613.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus m1293]
gi|228643129|gb|EEK99405.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus BDRD-ST26]
gi|358354371|dbj|BAL19543.1| S-adenosyl-methyltransferase MraW [Bacillus cereus NC7401]
gi|401089435|gb|EJP97606.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
IS075]
gi|401094196|gb|EJQ02278.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
AND1407]
gi|401212000|gb|EJR18746.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
MSX-D12]
gi|401214273|gb|EJR21003.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
MSX-A12]
Length = 310
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 131/337 (38%), Positives = 178/337 (52%), Gaps = 30/337 (8%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
+H+ V+L E +D + ++VDCTLG GHSS ++ E I D D A+ A
Sbjct: 3 NHVTVLLKETVDGLDI-KPGGTYVDCTLGGGGHSSYLLSQLTEGGRLIAFDQDEIAIQNA 61
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+ +S +G+ + T NFR++ L ++ + VD IL DLG+SS Q++
Sbjct: 62 KEKFSS--YGE-----QFITVRSNFRYLSEKLQELG----ITEVDGILFDLGVSSPQLDT 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
PERGFS D PLDMRMD A L A D++NSW ++ R+ +YGEE + KI
Sbjct: 111 PERGFSYHHDAPLDMRMDQDAPLTAYDVVNSWSYEQLVRIFFQYGEEKFSKQIARKIEAY 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +TGELV+LI+ P RR G A RVFQA+RIAVNDELK E +L +
Sbjct: 171 RENKAIETTGELVELIKEGIPAP-ARRTGG-HPAKRVFQAIRIAVNDELKVFEEALESAI 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
+ + PGGR+ VI+FHSLEDRI K TF R I D
Sbjct: 229 EMVKPGGRVSVITFHSLEDRICKTTF------KRNSTTPQLPPGLPIIPDEFKPKL---- 278
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PI PS E N R RSAKLR+ +K
Sbjct: 279 ------KLITRKPILPSDIELEENNRARSAKLRIAEK 309
>gi|49186768|ref|YP_030020.1| S-adenosyl-methyltransferase MraW [Bacillus anthracis str. Sterne]
gi|49180695|gb|AAT56071.1| S-adenosyl-methyltransferase MraW [Bacillus anthracis str. Sterne]
Length = 310
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 131/337 (38%), Positives = 178/337 (52%), Gaps = 30/337 (8%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
+H+ V+L E +D + ++VDCTLG GHSS ++ E I D D A+ A
Sbjct: 3 NHVTVLLKETVDGLDI-KPDGTYVDCTLGGGGHSSYLLSQLTEGGRLIAFDQDEIAIQNA 61
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+ +S +G+ +K+ NFR++ L ++ + VD IL DLG+SS Q++
Sbjct: 62 KEKFSS--YGEQFITVKS-----NFRYLSEKLQELG----ITEVDGILFDLGVSSPQLDT 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
PERGFS D PLDMRMD A L A D +NSW ++ R+ +YGEE + KI
Sbjct: 111 PERGFSYHHDAPLDMRMDQDAPLTAYDAVNSWSYEQLVRIFFQYGEEKFSKQIARKIEAY 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +TGELV+LI+ P RR G A RVFQA+RIAVNDELK E +L +
Sbjct: 171 RENKAIETTGELVELIKEGIPA-PARRTGG-HPAKRVFQAIRIAVNDELKVFEEALESAI 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
+ + PGGR+ VI+FHSLEDRI K TF R I D
Sbjct: 229 EMVKPGGRVSVITFHSLEDRICKTTF------KRNSTTPQLPPGLPIIPDEFKPKL---- 278
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PI PS E N R RSAKLR+ +K
Sbjct: 279 ------KLITRKPILPSDIELEENNRARSAKLRIAEK 309
>gi|169827004|ref|YP_001697162.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Lysinibacillus sphaericus C3-41]
gi|263456365|sp|B1HPY0.1|RSMH_LYSSC RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|168991492|gb|ACA39032.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Lysinibacillus sphaericus C3-41]
Length = 316
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 133/343 (38%), Positives = 186/343 (54%), Gaps = 42/343 (12%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + +VDCTLG AGHS +++ + I D D +A+ A+
Sbjct: 4 HTTVLLKETVDGLNIDPD-GVYVDCTLGGAGHSEYLVQQLSDKGRLICFDQDMTAIENAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFA-KNFRHIKSVLGQIDENILRSG---VDAILMDLGMSSMQ 231
L P+++ TF NFR++K E +L G VD IL DLG+SS Q
Sbjct: 63 IRLA--------PYIERVTFIHSNFRYLK-------EELLAHGFEQVDGILYDLGVSSPQ 107
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ PERGFS D PLDMRMD A+L A +++N W ++ R+ YGEE + KI
Sbjct: 108 LDTPERGFSYHHDAPLDMRMDQTATLTAFEVVNQWAYEDLVRIFFRYGEEKFSKQVARKI 167
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
+AR + +TG+LV+LI+ P R+ G A R+FQA+RIAVNDEL E SL
Sbjct: 168 EEARKSAPIETTGQLVELIKEGIPAAARRKGG--HPAKRIFQAIRIAVNDELGAAEDSLV 225
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIR--DDNINET 409
D + GGR+ VI+FHSLEDR+ K F ++A E N+ D++ T
Sbjct: 226 DAIDMINVGGRISVITFHSLEDRLCKTIF--------KEASSLPELPPNLPVIPDDMKPT 277
Query: 410 WIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
K++T++PI PS EE +N R RSAKLRV++KI
Sbjct: 278 L----------KLITRKPIVPSDEELEVNNRARSAKLRVVEKI 310
>gi|229092966|ref|ZP_04224098.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus Rock3-42]
gi|228690420|gb|EEL44205.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus Rock3-42]
Length = 310
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 130/337 (38%), Positives = 179/337 (53%), Gaps = 30/337 (8%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
+H+ V+L E +D + ++VDCTLG GHSS ++ E I D D A+ A
Sbjct: 3 NHVTVLLKETVDGLDI-KPDGTYVDCTLGGGGHSSYLLSQLTEGGRLIAFDQDEIAIQNA 61
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+ +S +G+ +K+ NFR++ L ++ + VD IL DLG+SS Q++
Sbjct: 62 KEKFSS--YGEQFITVKS-----NFRYLSEKLQELG----ITEVDGILFDLGVSSPQLDT 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
PERGFS D PLDMRMD A L A D++N+W ++ R+ +YGEE + KI
Sbjct: 111 PERGFSYHHDAPLDMRMDQDAPLTAYDVVNNWSYEQLVRIFFQYGEEKFSKQIARKIEAY 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +TGELV+LI+ P RR G A RVFQA+RIAVNDELK E +L +
Sbjct: 171 RENKAIETTGELVELIKEGIPA-PARRTGG-HPAKRVFQAIRIAVNDELKVFEEALESAI 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
+ + PGGR+ VI+FHSLEDRI K TF R I D
Sbjct: 229 EMVKPGGRVSVITFHSLEDRICKTTF------KRNSTTPQLPPGLPIIPDEFKPKL---- 278
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PI PS E N R RSAKLR+ +K
Sbjct: 279 ------KLITRKPILPSDIELEENNRARSAKLRIAEK 309
>gi|423395781|ref|ZP_17372982.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
BAG2X1-1]
gi|423406657|ref|ZP_17383806.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
BAG2X1-3]
gi|401653523|gb|EJS71067.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
BAG2X1-1]
gi|401659947|gb|EJS77430.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
BAG2X1-3]
Length = 310
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 130/336 (38%), Positives = 178/336 (52%), Gaps = 30/336 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D + ++VDCTLG GHSS ++ + I D D A+ A+
Sbjct: 4 HVTVLLKETVDGLDI-KPDGTYVDCTLGGGGHSSYLLSQLTDGGKLIAFDQDEIAIQNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
+S +G+ +K+ NFR++ L ++ + VD IL DLG+SS Q++ P
Sbjct: 63 EKFSS--YGEQFITVKS-----NFRYLSEKLQELG----ITEVDGILFDLGVSSPQLDTP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD A L A D++NSW ++ R+ +YGEE + KI R
Sbjct: 112 ERGFSYHHDAPLDMRMDQDAPLTAYDVVNSWSYEQLVRIFFQYGEEKFSKQIARKIEAYR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +TGELV+LI+ P RR G A RVFQA+RIAVNDELK E +L + +
Sbjct: 172 ENKAIETTGELVELIKEGIPA-PARRTGG-HPAKRVFQAIRIAVNDELKVFEEALESAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
+ PGGR+ VI+FHSLEDRI K TF R I D
Sbjct: 230 MVKPGGRVSVITFHSLEDRICKTTF------KRNSTTPQLPPGLPIIPDEFKPKL----- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PI PS E N R RSAKLR+ +K
Sbjct: 279 -----KLITRKPILPSDIELEENNRARSAKLRIAEK 309
>gi|423612133|ref|ZP_17587994.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
VD107]
gi|401247140|gb|EJR53484.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
VD107]
Length = 310
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 130/336 (38%), Positives = 178/336 (52%), Gaps = 30/336 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D + ++VDCTLG GHSS ++ + I D D A+ A+
Sbjct: 4 HVTVLLKETVDGLDI-KPGGTYVDCTLGGGGHSSYLLSQLTDGGKLIAFDQDEIAIQNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
+S +G+ +K+ NFR++ L ++ + VD IL DLG+SS Q++ P
Sbjct: 63 EKFSS--YGEQFVTVKS-----NFRYLSEKLHELG----ITEVDGILFDLGVSSPQLDTP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD A L A D++NSW ++ R+ +YGEE + KI R
Sbjct: 112 ERGFSYHHDAPLDMRMDQDAPLTAYDVVNSWSYEQLVRIFFQYGEEKFSKQIARKIEAYR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +TGELV+LI+ P RR G A RVFQA+RIAVNDELK E +L + +
Sbjct: 172 ENKAIETTGELVELIKEGIPA-PARRTGG-HPAKRVFQAIRIAVNDELKVFEEALESAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
+ PGGR+ VI+FHSLEDRI K TF R I D
Sbjct: 230 MVKPGGRVSVITFHSLEDRICKTTF------KRNSTTPQLPPGLPIIPDEFKPKL----- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PI PS E N R RSAKLR+ +K
Sbjct: 279 -----KLITRKPILPSDIELEENNRARSAKLRIAEK 309
>gi|317050381|ref|YP_004111497.1| S-adenosyl-methyltransferase MraW [Desulfurispirillum indicum S5]
gi|316945465|gb|ADU64941.1| S-adenosyl-methyltransferase MraW [Desulfurispirillum indicum S5]
Length = 316
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/338 (39%), Positives = 176/338 (52%), Gaps = 33/338 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITS--FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAK 173
HIPV+ VL + VDCT+G GHSS I+ P +++ IG+D DP+AL
Sbjct: 7 HIPVLADAVLSSLGPALNAEQPLLVDCTVGGGGHSSLILEHCPSVRI-IGIDQDPAALQA 65
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
L G+ L+ NF + +L Q N+ S V+ L DLG+SS Q++
Sbjct: 66 CSDRL-----GERFTPLR-----GNFAQLHRLLKQ--ANVAPSSVNGFLYDLGVSSHQLD 113
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
PERGFS L DGPLDMRMDP A L A D++N++ + E+ R++ YGEE + + I
Sbjct: 114 TPERGFSFLSDGPLDMRMDPSAPLSAADVVNTYSEEELARIIHAYGEERHSRRVARVIAA 173
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
R +T EL DLI + R I ATR FQALRI VN EL + +SL +
Sbjct: 174 CRREKPFTTTKELADLIHRDI--AKFYRNESIHPATRTFQALRIEVNGELDAITTSLESA 231
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
L PGG L VISFHSLEDRI+KQ F R+ A E W +
Sbjct: 232 LTYLRPGGILAVISFHSLEDRIIKQFF-------RQHASTC---------ICPPEVWQCR 275
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ILT++P+ E++LN R RSAKLRV ++
Sbjct: 276 CQHQPLLEILTRKPLIADEAEKQLNPRSRSAKLRVARR 313
>gi|229013103|ref|ZP_04170268.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
mycoides DSM 2048]
gi|229134728|ref|ZP_04263537.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus BDRD-ST196]
gi|228648774|gb|EEL04800.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus BDRD-ST196]
gi|228748357|gb|EEL98217.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
mycoides DSM 2048]
Length = 302
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 126/316 (39%), Positives = 170/316 (53%), Gaps = 29/316 (9%)
Query: 136 SFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTF 195
++VDCTLG GHSS ++ + I D D A+ A+ +S +G+ +K+
Sbjct: 15 TYVDCTLGGGGHSSYLLSQLTDGGKLIAFDQDEIAIQNAKEKFSS--YGEQFVTVKS--- 69
Query: 196 AKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQA 255
NFR++ L ++ + VD IL DLG+SS Q++ PERGFS D PLDMRMD A
Sbjct: 70 --NFRYLSEKLHELG----ITEVDGILFDLGVSSPQLDTPERGFSYHHDAPLDMRMDQDA 123
Query: 256 SLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTP 315
L A D++NSW ++ R+ +YGEE + KI R + +TGELV+LI+ P
Sbjct: 124 PLTAYDVVNSWSYEQLVRIFFQYGEEKFSKQITRKIEAYRENKAIETTGELVELIKEGIP 183
Query: 316 GMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRI 375
RR G A RVFQA+RIAVNDELK E +L + D + PGGR+ VI+FHSLEDRI
Sbjct: 184 A-PARRTGG-HPAKRVFQAIRIAVNDELKVFEEALESAIDMVKPGGRVSVITFHSLEDRI 241
Query: 376 VKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEE 435
K TF R + I D K++T++PI PS E
Sbjct: 242 CKTTF------KRNSTTPQLPQGLPIIPDEFKPKL----------KLITRKPILPSDIEL 285
Query: 436 RLNCRCRSAKLRVIQK 451
N R RSAKLR+ +K
Sbjct: 286 EENNRARSAKLRIAEK 301
>gi|452990662|emb|CCQ98184.1| S-adenosyl-dependent methyltransferase active on membrane-located
substrates [Clostridium ultunense Esp]
Length = 337
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 139/340 (40%), Positives = 186/340 (54%), Gaps = 37/340 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELK--LHIGVDVDPSALAK 173
H V+L E ++ +VD TLG GHS AI+ LK L IG+D D A+A
Sbjct: 18 HRTVLLQEAVEALQIKEN-GIYVDGTLGGGGHSEAIL---SRLKNGLLIGIDQDDRAIAA 73
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
A L HP + NF H+ ++L Q + I + VD L DLG+SS Q+
Sbjct: 74 AGERL--------HPGKNRLLLVRDNFVHMDAILNQ--QGIEK--VDGFLFDLGVSSPQL 121
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ ERGF + PLDMRMD + SL A +++N WP+ E+ R++REYGEE + +IV
Sbjct: 122 DEEERGFRYQEEAPLDMRMDRRQSLTAYEVVNEWPEGELTRIIREYGEERFARSIARRIV 181
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
+ R + +TGELV++I+ P RR G A R FQA+RIAVN EL+ L +LH
Sbjct: 182 ERRKTAPIATTGELVEVIKEAIPAP-ARRTGP-HPAKRTFQAIRIAVNRELEVLGRALHL 239
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
+ L PGGR+ VISFHSLEDRIVK+TF +E A G D +
Sbjct: 240 AIERLKPGGRIAVISFHSLEDRIVKETF-------QEYAAG----CTCPPDFPVCVCGKE 288
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
I+ KI+T++PI PS EE N R RSAKLRV +K+
Sbjct: 289 PIV-----KIITRKPILPSEEEIETNPRARSAKLRVAEKV 323
>gi|89099599|ref|ZP_01172474.1| S-adenosyl-methyltransferase MraW [Bacillus sp. NRRL B-14911]
gi|89085752|gb|EAR64878.1| S-adenosyl-methyltransferase MraW [Bacillus sp. NRRL B-14911]
Length = 310
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 125/316 (39%), Positives = 166/316 (52%), Gaps = 29/316 (9%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
+VDCT+G AGHS I+ D D +A+ A+ L+ +G K
Sbjct: 24 YVDCTMGGAGHSELILTQLSSRGKLYAFDQDETAIENAQEKLSK--YGD-----KITIIK 76
Query: 197 KNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQAS 256
NF H+K L E + VD +L DLG+SS Q++ PERGFS D PLDMRMD AS
Sbjct: 77 SNFLHLKEEL----EKAGVTEVDGVLYDLGVSSPQLDTPERGFSYHHDAPLDMRMDKDAS 132
Query: 257 LKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPG 316
L A +++N WP ++ R+ YGEE + KI AR + + +T +LV+LI+ P
Sbjct: 133 LSAYEVVNDWPYEDLVRIFFRYGEEKFSKQIARKIEAAREKAPIETTSQLVELIKDGIPA 192
Query: 317 MRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIV 376
R+ G A RVFQA+RIAVNDEL E SL D L PGGR+ VI+FHSLEDRI
Sbjct: 193 PARRKGGH--PAKRVFQAIRIAVNDELGVFEKSLEQAIDILKPGGRISVITFHSLEDRIC 250
Query: 377 KQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEER 436
K TF + E I + ++ K++ ++PI PS EE
Sbjct: 251 KATF-----------KKASETPPLPPGLPIIPDEFKPVL-----KLVARKPILPSEEELE 294
Query: 437 LNCRCRSAKLRVIQKI 452
N R RSAKLRV +K+
Sbjct: 295 ENNRARSAKLRVAEKL 310
>gi|397905150|ref|ZP_10506021.1| rRNA small subunit methyltransferase H [Caloramator australicus
RC3]
gi|397161799|emb|CCJ33355.1| rRNA small subunit methyltransferase H [Caloramator australicus
RC3]
Length = 309
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 128/337 (37%), Positives = 194/337 (57%), Gaps = 32/337 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H VML E ++ + ++ +VD TLG AGHSS I++ KL IG+D D AL ++
Sbjct: 5 HYSVMLNECIEGLNI-KSDGIYVDGTLGGAGHSSEILKRLSNGKL-IGIDQDIEALEYSK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L++ + + H NF +IKS+L +++ + VD +L+DLG+SS Q++NP
Sbjct: 63 RKLSNY-----NNVIFVHD---NFSNIKSILNELEID----KVDGVLLDLGVSSYQLDNP 110
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS + + LDMRM+ S+ A D++N + E+ R+++EYGEE+ + + IV+ R
Sbjct: 111 ERGFSYMHNARLDMRMNKDNSITAWDVVNKYSKEELTRIIKEYGEENFASKIADLIVKRR 170
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +T ELVD+I+ P R RR+G A R FQA+RI VN EL+ LE +++ C D
Sbjct: 171 KVKPIDTTFELVDIIKDAIPA-RARREGG-HPAKRTFQAIRIEVNQELQILEKAIYDCID 228
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L GGR+ +I+FHSLEDRIVK F RE+ ++L E
Sbjct: 229 VLKSGGRICIITFHSLEDRIVKNVF-----KERENPCSCSKDLPFCVCGKKPEL------ 277
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
K++TK+P+ PS +E N R +SAKLR+ +K+
Sbjct: 278 -----KVITKKPVLPSEKELLENSRSKSAKLRIAEKL 309
>gi|430750527|ref|YP_007213435.1| S-adenosyl-methyltransferase MraW [Thermobacillus composti KWC4]
gi|430734492|gb|AGA58437.1| S-adenosyl-methyltransferase MraW [Thermobacillus composti KWC4]
Length = 320
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 133/349 (38%), Positives = 177/349 (50%), Gaps = 48/349 (13%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E ++ + +VDCTLG AGHS I E I D D SA+ AR
Sbjct: 4 HVTVLLEEAVNGLKV-KPDGIYVDCTLGGAGHSELIASRLGEGGRLIAFDQDESAIEHAR 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGV---------DAILMDL 225
G+ P++ T + NFRH+ +E +L +GV D IL DL
Sbjct: 63 --------GRLAPYMDRVTLIRSNFRHL-------EEKLLETGVPTHEGVPQVDGILFDL 107
Query: 226 GMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWH 285
G+SS Q++ ERGF D PLDMRMD + L A DI+N W + E+ +L YGEE
Sbjct: 108 GVSSPQLDEAERGFGYRHDAPLDMRMDRASGLTAADIVNGWDEREIADILDRYGEERFAR 167
Query: 286 LLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKT 345
+ IV+AR R + +TGEL +L++ P RR G A R FQALRIAVNDEL
Sbjct: 168 RIAKAIVEARKRRPIATTGELAELVKEAIPAA-ARRTGG-HPARRSFQALRIAVNDELGA 225
Query: 346 LESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDN 405
E +LH CL PGGR+ VI+FHSLEDRI KQ F +
Sbjct: 226 EEDALHQAVACLKPGGRVAVITFHSLEDRICKQIFAKYV------------------QSC 267
Query: 406 INETWIRQIIQGWNG--KILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ G + +++ ++PI P AEE N R RSAKLR+ +K+
Sbjct: 268 TCPPDFPMCVCGASSTLRLVNRKPIEPGAEEIAANPRARSAKLRIAEKL 316
>gi|15895401|ref|NP_348750.1| S-adenosyl-methyltransferase MraW [Clostridium acetobutylicum ATCC
824]
gi|337737349|ref|YP_004636796.1| S-adenosyl-methyltransferase MraW [Clostridium acetobutylicum DSM
1731]
gi|384458858|ref|YP_005671278.1| S-adenosyl-methyltransferase MraW [Clostridium acetobutylicum EA
2018]
gi|20139082|sp|Q97H81.1|RSMH_CLOAB RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|15025123|gb|AAK80090.1|AE007714_3 Predicted S-adenosylmethionine-dependent methyltransferase,
involved in cell envelope biogenesis YLXA B.subtilis
ortholog [Clostridium acetobutylicum ATCC 824]
gi|325509547|gb|ADZ21183.1| S-adenosyl-methyltransferase MraW [Clostridium acetobutylicum EA
2018]
gi|336292677|gb|AEI33811.1| S-adenosyl-methyltransferase MraW [Clostridium acetobutylicum DSM
1731]
Length = 312
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 127/343 (37%), Positives = 183/343 (53%), Gaps = 37/343 (10%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
+ +H+PV+L E ++ + +VDCTLG AGHSS I++ IG+D D AL
Sbjct: 2 EFNHVPVLLEETIENLNIKED-GIYVDCTLGGAGHSSEILKRLSSKGRLIGIDQDKDALK 60
Query: 173 KARAHLNSLLHGQAHPHLKTHTFA-KNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQ 231
A L K TF NF +IK++L E + VD IL DLG+SS Q
Sbjct: 61 AASERLK---------EYKNLTFVHDNFSNIKNIL----EELKIDKVDGILADLGVSSYQ 107
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ PERGFS + D PLDMRM+ + A D++N + + ++ +++ YGEE + I
Sbjct: 108 LDEPERGFSYMNDAPLDMRMNRDSEFSAYDVINGYDEEKLYSIIKNYGEEKFAKRIAKFI 167
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
V+ R +++T ELVD+I++ P + RRQG A R FQA+RI VN EL+ L ++
Sbjct: 168 VEKRSEEAINTTFELVDIIKAAIPA-KFRRQGP-HPAKRTFQAIRIEVNQELEILNKTIE 225
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
D L GR+ +I+FHSLEDRIVK + R ++D + I
Sbjct: 226 DSVDKLKSEGRICIITFHSLEDRIVKNKY------------------RELQDPCMCPKDI 267
Query: 412 RQIIQGWNG--KILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ G KI+T++PI S+ E N R RSAKLRV +KI
Sbjct: 268 PMCVCGKKPKIKIITRKPIEASSYELEYNPRSRSAKLRVAEKI 310
>gi|307108403|gb|EFN56643.1| hypothetical protein CHLNCDRAFT_144447 [Chlorella variabilis]
Length = 468
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 115/247 (46%), Positives = 148/247 (59%), Gaps = 23/247 (9%)
Query: 218 VDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLRE 277
VDAIL+DLG+SSMQV+ +RGFS L DGPLDMRMDP A L AE +N+WP+ E+GRV+RE
Sbjct: 233 VDAILLDLGISSMQVDTADRGFSFLRDGPLDMRMDPAAPLSAELAVNTWPEGELGRVIRE 292
Query: 278 YGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQG------------WI 325
YGEE +W + +IV AR + +T +LV I S G G +
Sbjct: 293 YGEERHWRGIARRIVAAREEAPITTTQQLVRAIGSPGGGGGGGGGRGRGRRSGGGDARFK 352
Query: 326 KTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIID 385
ATR FQALRIAVN EL+++ +L +CLAPGGRL VI+FHSLEDRIVK F +
Sbjct: 353 HPATRTFQALRIAVNGELQSIAQALPDAIECLAPGGRLAVITFHSLEDRIVKWAFRAAAG 412
Query: 386 HNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAK 445
D + L E + + +ILT+RP+ PS EE+ N R RSAK
Sbjct: 413 MAPSDEQLPSYCL------PFEEAAAQASV-----RILTRRPVAPSEEEQAANVRSRSAK 461
Query: 446 LRVIQKI 452
LRV++K+
Sbjct: 462 LRVVEKL 468
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSA 170
HI V+L EVL F R + +VD TLGAAGH++A++R HPEL+ +G D+DP+A
Sbjct: 84 HISVLLSEVLAAFEG-RAVRRYVDGTLGAAGHATAMLRQHPELESLVGFDLDPTA 137
>gi|345017946|ref|YP_004820299.1| ribosomal RNA small subunit methyltransferase H [Thermoanaerobacter
wiegelii Rt8.B1]
gi|344033289|gb|AEM79015.1| Ribosomal RNA small subunit methyltransferase H [Thermoanaerobacter
wiegelii Rt8.B1]
Length = 308
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 126/345 (36%), Positives = 185/345 (53%), Gaps = 43/345 (12%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
+ SH V+L E ++ + + + +VD TLG GHS I++ P KL I +D D A+
Sbjct: 2 EYSHKSVLLKETIE-YLNIKPEGIYVDGTLGGGGHSEEILKRLPTGKL-IAIDRDLDAIK 59
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
++ L + + NF++IK +L +D + VD IL+DLG+SS Q+
Sbjct: 60 ASKERLKN--------YKNVEYINDNFKNIKEILKSLDID----KVDGILLDLGVSSYQL 107
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
ERGFS + D PLDMRMD + A D++N + E+ RV+REYGEE + I
Sbjct: 108 EEVERGFSYMKDAPLDMRMDKNSPFSAYDVVNKYSQQELERVIREYGEEKWASRIAKFIA 167
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
+ R +G + +T +LV++I++ P RR+G A R FQA+RI VN+ELK L+ ++
Sbjct: 168 KEREKGEIKTTFQLVEIIKNAVPA-SARREGP-HPAKRTFQAIRIEVNEELKGLDKAIED 225
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIID-----HNREDAEGNEEELRNIRDDNIN 407
+ L GR+ +I+FHSLEDRIVK TF + + HN G E +
Sbjct: 226 MVEVLRGKGRIAIITFHSLEDRIVKNTFKKLENPCTCPHNMPCTCGKEPLI--------- 276
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
KI+TK+P+ PS EE N R RSAKLRV +K+
Sbjct: 277 -------------KIITKKPVLPSKEEIETNSRSRSAKLRVAEKL 308
>gi|295398679|ref|ZP_06808703.1| S-adenosyl-methyltransferase MraW [Aerococcus viridans ATCC 11563]
gi|294973114|gb|EFG48917.1| S-adenosyl-methyltransferase MraW [Aerococcus viridans ATCC 11563]
Length = 316
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 135/339 (39%), Positives = 179/339 (52%), Gaps = 32/339 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+L E +D + + +VDCTLG AGHSS I A + I D D A+ A
Sbjct: 7 HISVLLNESVDGLAI-KPNGIYVDCTLGGAGHSSKIAAALSDEGRLIAFDQDLVAIGNAE 65
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L + + K NFRHI+S L E + +GVD IL DLG+SS Q++
Sbjct: 66 KVLAAEIESG-----KVTLVHNNFRHIQSEL----EKMGITGVDGILYDLGVSSPQLDEI 116
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD +L AE I+N W ++ R+ YGEE + KI Q R
Sbjct: 117 ERGFSYHQDAPLDMRMDQTQALTAETIINDWEYNDLVRIFYRYGEEKFSKQIARKIEQRR 176
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ T ELVD+++ P R+ G A R+FQA+RIAVNDEL +E SL +
Sbjct: 177 ADHRITRTEELVDIVKEAIPAPARRKGG--HPAKRIFQAVRIAVNDELGAIEDSLEQALN 234
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRN--IRDDNINETWIRQ 413
L GGR+ ISF SLEDRIVKQ F +DA EE N + + +I +
Sbjct: 235 LLNVGGRVSAISFQSLEDRIVKQMF--------KDASTGEELPANLPVINADIEAPF--- 283
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
K++ ++PI S EE N R +SAKLR+I++I
Sbjct: 284 -------KLVNRKPIYASEEELAYNSRAQSAKLRIIERI 315
>gi|163790543|ref|ZP_02184972.1| S-adenosyl-methyltransferase MraW [Carnobacterium sp. AT7]
gi|159874146|gb|EDP68221.1| S-adenosyl-methyltransferase MraW [Carnobacterium sp. AT7]
Length = 318
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 137/339 (40%), Positives = 182/339 (53%), Gaps = 32/339 (9%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
+H V+L E +D S S +VDCTLG AGHS ++ E D D AL A
Sbjct: 5 NHETVLLRETVDGLSLSPE-GIYVDCTLGGAGHSEYLLSQLNEKGHLYAFDQDDRALENA 63
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+ L + +K NFR+IK L N+ VD IL DLG+SS Q++
Sbjct: 64 KIRLAEYVEKGMVTFIKA-----NFRYIKDELA----NLGIKEVDGILYDLGVSSPQLDE 114
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS D PLDMRMD A L A++++N W ++ R+ YGEE + KI A
Sbjct: 115 AERGFSYHQDAPLDMRMDTDAPLTAKEVINEWSYHDLIRIFYRYGEEKFSKQIARKIEAA 174
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +T ELV+LI++ P R+ G A RVFQA+RIAVNDEL ++E SL
Sbjct: 175 REIKLIETTSELVELIKAGIPAPARRKGG--HPAKRVFQAVRIAVNDELSSVEDSLEQAI 232
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNR--EDAEGNEEELRNIRDDNINETWIR 412
+ LA GGR+ VISFHSLEDRIVK F DH++ E G L + D + E
Sbjct: 233 ELLAIGGRISVISFHSLEDRIVKSIFK---DHSKGPELPRG----LPVVPDGFLPEL--- 282
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PI PS +E +N R RSAKLR+ +K
Sbjct: 283 --------KLITRKPILPSEQELEVNNRSRSAKLRIAEK 313
>gi|319649673|ref|ZP_08003829.1| S-adenosyl-methyltransferase MraW [Bacillus sp. 2_A_57_CT2]
gi|317398835|gb|EFV79517.1| S-adenosyl-methyltransferase MraW [Bacillus sp. 2_A_57_CT2]
Length = 310
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 125/316 (39%), Positives = 168/316 (53%), Gaps = 29/316 (9%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
+VDCTLG AGHS I+ E D D +A+A A+ L +G +
Sbjct: 24 YVDCTLGGAGHSELILSQLSEKGKLYAFDQDDTAIAHAKEKLAE--YGD-----RITIIK 76
Query: 197 KNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQAS 256
NF++++ L N+ S VD +L DLG+SS Q++ PERGFS D PLDMRMD A
Sbjct: 77 SNFKYLQEELA----NLGVSKVDGVLYDLGVSSPQLDTPERGFSYHNDAPLDMRMDTGAD 132
Query: 257 LKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPG 316
+ A D++N W E+ ++ YGEE + KI AR + +TG+LV+LI+ P
Sbjct: 133 ISAYDVVNRWEYGELVKIFFRYGEEKFSKQIARKIEAAREVSPIETTGQLVELIKEAIPA 192
Query: 317 MRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIV 376
R+ G A RVFQA+RIAVNDEL E SLH D L P GR+ VI+FHSLEDRI
Sbjct: 193 PARRKGG--HPAKRVFQAIRIAVNDELGVFEDSLHQAIDILNPNGRISVITFHSLEDRIC 250
Query: 377 KQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEER 436
K F + L I D+ + I+ K++ ++PI PS EE
Sbjct: 251 KAAF-----KKASETPNLPPGLPIIPDE------YKPIL-----KLINRKPILPSEEELE 294
Query: 437 LNCRCRSAKLRVIQKI 452
N R RSAKLR+ +K+
Sbjct: 295 HNNRARSAKLRIAEKL 310
>gi|423452778|ref|ZP_17429631.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
BAG5X1-1]
gi|401139337|gb|EJQ46899.1| ribosomal RNA small subunit methyltransferase H [Bacillus cereus
BAG5X1-1]
Length = 310
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 130/339 (38%), Positives = 174/339 (51%), Gaps = 36/339 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D + T +VDCTLG GHSS ++ + I D D A+ A+
Sbjct: 4 HVTVLLKETVDGLDIKPSGT-YVDCTLGGGGHSSYLLSQLTDGGKLIAFDQDEIAIQNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG---VDAILMDLGMSSMQV 232
+ +S + + F +KS + E + G VD IL DLG+SS Q+
Sbjct: 63 ENFSS--------------YGEQFVTVKSNFCYLSEKLHELGITEVDGILFDLGVSSPQL 108
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ PERGFS D PLDMRMD A L A D++NSW ++ R+ +YGEE + KI
Sbjct: 109 DTPERGFSYHHDAPLDMRMDQDAPLTAYDVVNSWSYEQLVRIFFQYGEEKFSKQIARKIE 168
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
R + +TGELV+LI+ P RR G A RVFQA+RIAVNDELK E +L +
Sbjct: 169 AYRENKAIETTGELVELIKEGIPA-PARRTGG-HPAKRVFQAIRIAVNDELKVFEEALES 226
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
+ PGGR+ VI+FHSLEDRI K TF R + I D
Sbjct: 227 AIGMVKPGGRVSVITFHSLEDRICKTTF------KRNSTTPQLPKGLPIIPDEFKPKL-- 278
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PI PS E N R RSAKLR+ +K
Sbjct: 279 --------KLITRKPILPSDIELEENNRARSAKLRIAEK 309
>gi|301300385|ref|ZP_07206587.1| S-adenosyl-methyltransferase MraW [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|300851987|gb|EFK79669.1| S-adenosyl-methyltransferase MraW [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 314
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 131/337 (38%), Positives = 179/337 (53%), Gaps = 28/337 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+L E +D + + ++VDCTLG GHS I+ E D D +A+
Sbjct: 6 HITVLLNEAVDGLNI-KPDGTYVDCTLGGGGHSGLILSKLSENGKLYSFDQDITAI---- 60
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
+ N + + K + NFR+I L + NIL GVD IL DLG+SS Q +N
Sbjct: 61 -NFNKDKFKEENELGKINFIKSNFRNISEELNK--RNIL--GVDGILYDLGVSSPQFDNA 115
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
+RGFS D PLDMRMD SL A D++N W ++ R+ YGEE + +I + R
Sbjct: 116 DRGFSYNYDAPLDMRMDQSQSLTARDVVNDWSYEQLVRIFFRYGEEKFAKSIARRIEKVR 175
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +TG+LVDLI+ P + RR+G A + FQA+RIAVNDEL LE SL D
Sbjct: 176 QQTPIETTGQLVDLIKEAIPA-KARRKGG-HPAKKTFQAIRIAVNDELGALEESLEQALD 233
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L PGGR+ VI+F SLEDR+VK F + + L I D
Sbjct: 234 LLNPGGRISVITFQSLEDRLVKVMF-----KQKTNLPELPPGLPVIPDS----------- 277
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
Q K++T++PI PS +E N R SAKLR+I+K+
Sbjct: 278 QKVEYKLITRKPIVPSEDEITHNNRAHSAKLRIIEKL 314
>gi|354558756|ref|ZP_08978010.1| Ribosomal RNA small subunit methyltransferase H [Desulfitobacterium
metallireducens DSM 15288]
gi|353545818|gb|EHC15268.1| Ribosomal RNA small subunit methyltransferase H [Desulfitobacterium
metallireducens DSM 15288]
Length = 310
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 133/341 (39%), Positives = 185/341 (54%), Gaps = 39/341 (11%)
Query: 116 HIPVMLGEVLD-VFSSSRTITSFVDCTLGAAGHSSAII-RAHPELKLHIGVDVDPSALAK 173
HI V+L E ++ +F + +VDCTLG AGH+ ++ + E KL IG D DP A+A
Sbjct: 5 HITVLLKETVEGIFKDPSGV--YVDCTLGGAGHTRLLLSKLSTEGKL-IGFDQDPMAIAN 61
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
A+ + H + KNF H++ L E + V I DLG+SS Q++
Sbjct: 62 AQENF--------HEDERLILVNKNFEHLEESL----ETLKLMPVQGIYFDLGVSSPQLD 109
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
ERGFS + D LDMRM+P+ A ++N W ++ +L +YGEE + IV+
Sbjct: 110 EAERGFSYMQDAELDMRMNPENPWTARRLVNEWSAEQLAEILWKYGEEKWSKRIAEFIVK 169
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + + +TGELV++I+S P RR+G A R FQALRIAVNDEL LE +L
Sbjct: 170 ARDQKEILTTGELVEVIKSAIPAA-ARREG-PHPAKRTFQALRIAVNDELGVLERALDQV 227
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
CL PGGR+GVI+FHSLEDRIVK E++ + R
Sbjct: 228 IACLGPGGRVGVITFHSLEDRIVK------------------EKMNSWRGRCTCPPSFPV 269
Query: 414 IIQGWN--GKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ G K++T++PI PSAEE N R RSAKLR+ +K+
Sbjct: 270 CLCGATPLAKVITRKPILPSAEEIEENPRSRSAKLRIAEKL 310
>gi|149181747|ref|ZP_01860239.1| S-adenosyl-methyltransferase MraW [Bacillus sp. SG-1]
gi|148850595|gb|EDL64753.1| S-adenosyl-methyltransferase MraW [Bacillus sp. SG-1]
Length = 310
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 134/340 (39%), Positives = 176/340 (51%), Gaps = 36/340 (10%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
H V+L E +D +VDCTLG AGHS ++ D D +A+ A
Sbjct: 3 EHTTVLLKETVDGLDIKED-GVYVDCTLGGAGHSEYLVSQLGVTGKLYCFDQDQTAIDHA 61
Query: 175 RAHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
+ L P+L TF + NFR IK L + + VD ++ DLG+SS Q++
Sbjct: 62 KEKLA--------PYLDRVTFIRSNFRFIKEELAERGVH----QVDGVMFDLGVSSPQLD 109
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
PERGFS D PLDMRMD + L A +++N WP ++ R+ YGEE + KI
Sbjct: 110 TPERGFSYHHDAPLDMRMDLEGDLTAHEVVNQWPYEKLVRIFFRYGEEKFSKQIARKIEA 169
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +TGELVDLI+ P R+ G A RVFQA+RIAVNDEL +E +L
Sbjct: 170 AREIKSIETTGELVDLIKEGIPAPARRKGGH--PAKRVFQAIRIAVNDELDAVEEALEKS 227
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNINETWI 411
+ L P GR+ VI+FHSLEDRI K F +E A G + L I D E
Sbjct: 228 IEILKPSGRISVITFHSLEDRITKTLF-------KEKASGPDLPHGLPVIPDAYKPEL-- 278
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PI PS EE N R RSAKLRV +K
Sbjct: 279 ---------KLVTRKPILPSEEELERNNRARSAKLRVAEK 309
>gi|170738613|ref|YP_001767268.1| S-adenosyl-methyltransferase MraW [Methylobacterium sp. 4-46]
gi|263456469|sp|B0UFI0.1|RSMH_METS4 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|168192887|gb|ACA14834.1| S-adenosyl-methyltransferase MraW [Methylobacterium sp. 4-46]
Length = 337
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 125/341 (36%), Positives = 177/341 (51%), Gaps = 37/341 (10%)
Query: 114 SSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAK 173
+ HIPV+L EV V VD T GA G+S A++ A P+L++ I +D DP+A+A
Sbjct: 4 APHIPVLLAEVRGVLRLGEGPGVVVDGTFGAGGYSRALLAADPDLRV-IAIDRDPTAVAA 62
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGV---DAILMDLGMSSM 230
R ++ G +D + R GV D +++D+G+SSM
Sbjct: 63 G--------------QELAAAAGGRLRLVQGRFGDLDAIVRREGVEAVDGVVLDIGVSSM 108
Query: 231 QVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNK 290
Q++ ERGFS DGPLDMRM+ A A D++N P+AE+ ++ +GEE +
Sbjct: 109 QLDRAERGFSFRADGPLDMRME-GAGTSAADLVNGAPEAELADIIYHFGEERRSRAVARA 167
Query: 291 IVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSL 350
I++AR R + +TG L +++ V +R I ATR FQALRIAVNDEL L +L
Sbjct: 168 ILEARRRAPIATTGALAEIVAGV---VRAEPGSGIHPATRTFQALRIAVNDELGELNRAL 224
Query: 351 HACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETW 410
HA L PGGRL V++FHSLEDRIVKQ F + R +
Sbjct: 225 HAAERILRPGGRLAVVTFHSLEDRIVKQFF-------------SARSGRAVSASRHLPMA 271
Query: 411 IRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
R + + + ++TK P+ PS E N R RSAKLR ++
Sbjct: 272 ERPVPRSFT--LVTKGPVGPSEAEAAANPRARSAKLRAGER 310
>gi|407473752|ref|YP_006788152.1| ribosomal RNA small subunit methyltransferase H [Clostridium
acidurici 9a]
gi|407050260|gb|AFS78305.1| ribosomal RNA small subunit methyltransferase H [Clostridium
acidurici 9a]
Length = 310
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 131/338 (38%), Positives = 188/338 (55%), Gaps = 31/338 (9%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
+HI V+L E +D + +VD TLG AGHS I++ +L IG+D D +A+ KA
Sbjct: 4 NHISVLLEECIDGLNIKEN-GIYVDGTLGGAGHSKEIVKKLKSGRL-IGIDQDTNAIKKA 61
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+ L S + K NF++IK++L ++ GVD IL+DLG+SS Q++
Sbjct: 62 KDVLESHMD-------KVTIVHDNFKNIKNILNDLE----IEGVDGILLDLGVSSHQLDE 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS D LDMRM+ + LKA D++N + E+ R+++EYGEE + I
Sbjct: 111 GERGFSYNQDAYLDMRMNVKQELKAWDVVNEYSKKEIERIIKEYGEERWASRIAQFIEDE 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +++T ELV++I+ P G R+ A R FQA+RI VN+EL L+ ++
Sbjct: 171 RNKSAINTTCELVEVIKKAIPS--GARREGPHPAKRTFQAIRIEVNNELGILKETIIDGC 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
+ L GGRL VI+FHSLEDRIVK+TF + N+ E I Q
Sbjct: 229 NSLNRGGRLCVITFHSLEDRIVKETFKEL----------------NLECTCPPEFPICQC 272
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ KI+T++PI PS E LN R RSAKLR+I+KI
Sbjct: 273 NKKREVKIITRKPILPSERELELNPRSRSAKLRIIEKI 310
>gi|256852642|ref|ZP_05558013.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis T8]
gi|256711987|gb|EEU27024.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis T8]
Length = 319
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 131/343 (38%), Positives = 183/343 (53%), Gaps = 32/343 (9%)
Query: 112 QQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
++ H V+L E +D + +VDCTLG AGHS ++ E D D AL
Sbjct: 4 EEFRHYTVLLKETVDGLQV-KPDGVYVDCTLGGAGHSEYLLTQLNEHGHLYAFDQDQKAL 62
Query: 172 AKARAHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSS 229
A A+ L + GQ TF K NFR+IK L + + VD IL DLG+SS
Sbjct: 63 AHAKTRLQKYVDKGQV-------TFIKSNFRNIKEELAE--HGVFH--VDGILYDLGVSS 111
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
Q++ ERGFS D PLDMRMD A L A +++N++ +E+ ++ YGEE +
Sbjct: 112 PQLDEAERGFSYHQDAPLDMRMDQDAPLTAREVVNTYSYSELVKIFFRYGEEKFSKQIAR 171
Query: 290 KIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESS 349
+I + R + + +TGELV++I++ P R+ G A R+FQA+RIAVNDEL +E S
Sbjct: 172 EIERVREKQPIETTGELVEIIKTAIPAPARRKGGH--PAKRIFQAIRIAVNDELGAVEES 229
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINET 409
L D LA GR+ VI+FHSLEDRIVK F +E ++D
Sbjct: 230 LEQAIDLLAKNGRISVITFHSLEDRIVKTMF---------------KEYSTVQDLPPGIP 274
Query: 410 WIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ + Q K++T++PI PS E N R RSAKLR+ +KI
Sbjct: 275 VVPEEFQP-ELKVITRKPILPSDSELSENNRSRSAKLRIAEKI 316
>gi|335040557|ref|ZP_08533683.1| Ribosomal RNA small subunit methyltransferase H [Caldalkalibacillus
thermarum TA2.A1]
gi|334179527|gb|EGL82166.1| Ribosomal RNA small subunit methyltransferase H [Caldalkalibacillus
thermarum TA2.A1]
Length = 310
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 125/319 (39%), Positives = 173/319 (54%), Gaps = 33/319 (10%)
Query: 136 SFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTF 195
++VDCTLG AGHS I IG+D D AL AR L A+ ++
Sbjct: 23 TYVDCTLGGAGHSQLIASRLGPGGCLIGIDQDQEALEHARRRL-------ANFNISLVLV 75
Query: 196 AKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQA 255
+NFR++ +L DE + VD +L DLG+SS Q++ ERGFS D PLDMRMD +
Sbjct: 76 QRNFRYLAEIL---DEAGFQQ-VDGVLFDLGVSSPQLDQAERGFSYQHDAPLDMRMDQRQ 131
Query: 256 SLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTP 315
L A D++NSW + ++ V+ YGEE + +IV+ R + + +TGELVD+I+ P
Sbjct: 132 DLTAFDVVNSWSEEQLAEVIYRYGEERYSRRIARRIVETRKKKPIKTTGELVDVIKQSIP 191
Query: 316 GMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRI 375
RQ A R FQA+RIAVNDEL E +L + L GGR+ VI+FHSLEDRI
Sbjct: 192 AK--ARQNGPHPAKRTFQAIRIAVNDELNAFEEALSQAIERLNKGGRVAVITFHSLEDRI 249
Query: 376 VKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGW--NGKILTKRPITPSAE 433
KQ F R+ ++G + Q + G + KI+ ++PI P+ +
Sbjct: 250 CKQMF-------RQKSQG-----------CTCPPGLPQCVCGQVPSLKIVNRKPIVPTLQ 291
Query: 434 EERLNCRCRSAKLRVIQKI 452
E N R RSAKLR+ +KI
Sbjct: 292 EVEQNPRARSAKLRIAEKI 310
>gi|29375571|ref|NP_814725.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis V583]
gi|421513315|ref|ZP_15960092.1| rRNA small subunit methyltransferase H [Enterococcus faecalis ATCC
29212]
gi|29343032|gb|AAO80795.1| conserved hypothetical protein TIGR00006 [Enterococcus faecalis
V583]
gi|401673569|gb|EJS79950.1| rRNA small subunit methyltransferase H [Enterococcus faecalis ATCC
29212]
Length = 319
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 131/343 (38%), Positives = 183/343 (53%), Gaps = 32/343 (9%)
Query: 112 QQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
++ H V+L E +D + +VDCTLG AGHS ++ E D D AL
Sbjct: 4 EEFRHYTVLLKETVDGLQV-KPDGVYVDCTLGGAGHSEYLLTQLNEHGHLYAFDQDQKAL 62
Query: 172 AKARAHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSS 229
A A+ L + GQ TF K NFR+IK L + + VD IL DLG+SS
Sbjct: 63 AHAKTRLQKYVDKGQV-------TFIKSNFRNIKEELAE--HGVFH--VDGILYDLGVSS 111
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
Q++ ERGFS D PLDMRMD A L A +++N++ +E+ ++ YGEE +
Sbjct: 112 PQLDEAERGFSYHQDAPLDMRMDQDAPLTAREVVNTYSYSELVKIFFRYGEEKFSKQIAR 171
Query: 290 KIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESS 349
+I + R + + +TGELV++I++ P R+ G A R+FQA+RIAVNDEL +E S
Sbjct: 172 EIERVREKQPIETTGELVEIIKTAIPAPARRKGGH--PAKRIFQAIRIAVNDELGAVEES 229
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINET 409
L D LA GR+ VI+FHSLEDRIVK F +E ++D
Sbjct: 230 LEQAIDLLAKNGRISVITFHSLEDRIVKTMF---------------KEYSTVQDLPPGIP 274
Query: 410 WIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ + Q K++T++PI PS E N R RSAKLR+ +KI
Sbjct: 275 VVPEEFQP-ELKVITRKPILPSDSELSENNRSRSAKLRIAEKI 316
>gi|422694596|ref|ZP_16752587.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX4244]
gi|315147940|gb|EFT91956.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX4244]
Length = 322
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 131/343 (38%), Positives = 183/343 (53%), Gaps = 32/343 (9%)
Query: 112 QQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
++ H V+L E +D + +VDCTLG AGHS ++ E D D AL
Sbjct: 7 EEFRHYTVLLKETVDGLQV-KPDGVYVDCTLGGAGHSEYLLTQLNEHGHLYAFDQDQKAL 65
Query: 172 AKARAHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSS 229
A A+ L + GQ TF K NFR+IK L + + VD IL DLG+SS
Sbjct: 66 AHAKTRLQKYVDKGQV-------TFIKSNFRNIKEELAE--HGVFH--VDGILYDLGVSS 114
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
Q++ ERGFS D PLDMRMD A L A +++N++ +E+ ++ YGEE +
Sbjct: 115 PQLDEAERGFSYHQDAPLDMRMDQDAPLTAREVVNTYSYSELVKIFFRYGEEKFSKQITR 174
Query: 290 KIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESS 349
+I + R + + +TGELV++I++ P R+ G A R+FQA+RIAVNDEL +E S
Sbjct: 175 EIERVREKQPIETTGELVEIIKTAIPAPARRKGGH--PAKRIFQAIRIAVNDELGAVEES 232
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINET 409
L D LA GR+ VI+FHSLEDRIVK F +E ++D
Sbjct: 233 LEQAIDLLAKNGRISVITFHSLEDRIVKTMF---------------KEYSTVQDLPPGIP 277
Query: 410 WIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ + Q K++T++PI PS E N R RSAKLR+ +KI
Sbjct: 278 VVPEEFQP-ELKVITRKPILPSDSELSENNRSRSAKLRIAEKI 319
>gi|229546836|ref|ZP_04435561.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX1322]
gi|307290049|ref|ZP_07569973.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX0411]
gi|312901052|ref|ZP_07760343.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX0470]
gi|422685567|ref|ZP_16743783.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX4000]
gi|229308001|gb|EEN73988.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX1322]
gi|306498891|gb|EFM68385.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX0411]
gi|311291878|gb|EFQ70434.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX0470]
gi|315029678|gb|EFT41610.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX4000]
Length = 322
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 131/343 (38%), Positives = 183/343 (53%), Gaps = 32/343 (9%)
Query: 112 QQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
++ H V+L E +D + +VDCTLG AGHS ++ E D D AL
Sbjct: 7 EEFRHYTVLLKETVDGLQV-KPDGVYVDCTLGGAGHSEYLLTQLNEHGHLYAFDQDQKAL 65
Query: 172 AKARAHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSS 229
A A+ L + GQ TF K NFR+IK L + + VD IL DLG+SS
Sbjct: 66 AHAKTRLQKYVDKGQV-------TFIKSNFRNIKEELAE--HGVFH--VDGILYDLGVSS 114
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
Q++ ERGFS D PLDMRMD A L A +++N++ +E+ ++ YGEE +
Sbjct: 115 PQLDEAERGFSYHQDAPLDMRMDQDAPLTAREVVNTYSYSELVKIFFRYGEEKFSKQIAR 174
Query: 290 KIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESS 349
+I + R + + +TGELV++I++ P R+ G A R+FQA+RIAVNDEL +E S
Sbjct: 175 EIERVREKQPIETTGELVEIIKTAIPAPARRKGGH--PAKRIFQAIRIAVNDELGAVEES 232
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINET 409
L D LA GR+ VI+FHSLEDRIVK F +E ++D
Sbjct: 233 LEQAIDLLAKNGRISVITFHSLEDRIVKTMF---------------KEYSTVQDLPPGIP 277
Query: 410 WIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ + Q K++T++PI PS E N R RSAKLR+ +KI
Sbjct: 278 VVPEEFQP-ELKVITRKPILPSDSELSENNRSRSAKLRIAEKI 319
>gi|255971443|ref|ZP_05422029.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Enterococcus faecalis T1]
gi|255974058|ref|ZP_05424644.1| mraW [Enterococcus faecalis T2]
gi|256617913|ref|ZP_05474759.1| mraW [Enterococcus faecalis ATCC 4200]
gi|256761747|ref|ZP_05502327.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Enterococcus faecalis T3]
gi|256957082|ref|ZP_05561253.1| mraW [Enterococcus faecalis DS5]
gi|256960173|ref|ZP_05564344.1| mraW [Enterococcus faecalis Merz96]
gi|256962585|ref|ZP_05566756.1| mraW [Enterococcus faecalis HIP11704]
gi|257077878|ref|ZP_05572239.1| mraW [Enterococcus faecalis JH1]
gi|257081242|ref|ZP_05575603.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis E1Sol]
gi|257083900|ref|ZP_05578261.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis Fly1]
gi|257086348|ref|ZP_05580709.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Enterococcus faecalis D6]
gi|257089398|ref|ZP_05583759.1| S-adenosyl-methyltransferase mraW [Enterococcus faecalis CH188]
gi|257415608|ref|ZP_05592602.1| mraW [Enterococcus faecalis ARO1/DG]
gi|257418579|ref|ZP_05595573.1| S-adenosyl-methyltransferase mraW [Enterococcus faecalis T11]
gi|257421238|ref|ZP_05598228.1| S-adenosyl-methyltransferase mraW [Enterococcus faecalis X98]
gi|294780578|ref|ZP_06745941.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis PC1.1]
gi|300859663|ref|ZP_07105751.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TUSoD
Ef11]
gi|384518095|ref|YP_005705400.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis 62]
gi|397699382|ref|YP_006537170.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis D32]
gi|428766497|ref|YP_007152608.1| S-adenosyl-methyltransferase [Enterococcus faecalis str. Symbioflor
1]
gi|430358873|ref|ZP_19425633.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis OG1X]
gi|430368024|ref|ZP_19428006.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis M7]
gi|30179792|sp|O07104.3|RSMH_ENTFA RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|255962461|gb|EET94937.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Enterococcus faecalis T1]
gi|255966930|gb|EET97552.1| mraW [Enterococcus faecalis T2]
gi|256597440|gb|EEU16616.1| mraW [Enterococcus faecalis ATCC 4200]
gi|256682998|gb|EEU22693.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Enterococcus faecalis T3]
gi|256947578|gb|EEU64210.1| mraW [Enterococcus faecalis DS5]
gi|256950669|gb|EEU67301.1| mraW [Enterococcus faecalis Merz96]
gi|256953081|gb|EEU69713.1| mraW [Enterococcus faecalis HIP11704]
gi|256985908|gb|EEU73210.1| mraW [Enterococcus faecalis JH1]
gi|256989272|gb|EEU76574.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis E1Sol]
gi|256991930|gb|EEU79232.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis Fly1]
gi|256994378|gb|EEU81680.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Enterococcus faecalis D6]
gi|256998210|gb|EEU84730.1| S-adenosyl-methyltransferase mraW [Enterococcus faecalis CH188]
gi|257157436|gb|EEU87396.1| mraW [Enterococcus faecalis ARO1/DG]
gi|257160407|gb|EEU90367.1| S-adenosyl-methyltransferase mraW [Enterococcus faecalis T11]
gi|257163062|gb|EEU93022.1| S-adenosyl-methyltransferase mraW [Enterococcus faecalis X98]
gi|294452405|gb|EFG20844.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis PC1.1]
gi|300850481|gb|EFK78230.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TUSoD
Ef11]
gi|323480228|gb|ADX79667.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis 62]
gi|397336021|gb|AFO43693.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis D32]
gi|427184670|emb|CCO71894.1| S-adenosyl-methyltransferase [Enterococcus faecalis str. Symbioflor
1]
gi|429513698|gb|ELA03277.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis OG1X]
gi|429516529|gb|ELA06019.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis M7]
Length = 318
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 131/343 (38%), Positives = 183/343 (53%), Gaps = 32/343 (9%)
Query: 112 QQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
++ H V+L E +D + +VDCTLG AGHS ++ E D D AL
Sbjct: 3 EEFRHYTVLLKETVDGLQV-KPDGVYVDCTLGGAGHSEYLLTQLNEHGHLYAFDQDQKAL 61
Query: 172 AKARAHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSS 229
A A+ L + GQ TF K NFR+IK L + + VD IL DLG+SS
Sbjct: 62 AHAKTRLQKYVDKGQV-------TFIKSNFRNIKEELAE--HGVFH--VDGILYDLGVSS 110
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
Q++ ERGFS D PLDMRMD A L A +++N++ +E+ ++ YGEE +
Sbjct: 111 PQLDEAERGFSYHQDAPLDMRMDQDAPLTAREVVNTYSYSELVKIFFRYGEEKFSKQIAR 170
Query: 290 KIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESS 349
+I + R + + +TGELV++I++ P R+ G A R+FQA+RIAVNDEL +E S
Sbjct: 171 EIERVREKQPIETTGELVEIIKTAIPAPARRKGGH--PAKRIFQAIRIAVNDELGAVEES 228
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINET 409
L D LA GR+ VI+FHSLEDRIVK F +E ++D
Sbjct: 229 LEQAIDLLAKNGRISVITFHSLEDRIVKTMF---------------KEYSTVQDLPPGIP 273
Query: 410 WIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ + Q K++T++PI PS E N R RSAKLR+ +KI
Sbjct: 274 VVPEEFQP-ELKVITRKPILPSDSELSENNRSRSAKLRIAEKI 315
>gi|227555099|ref|ZP_03985146.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis HH22]
gi|229548930|ref|ZP_04437655.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis ATCC
29200]
gi|293382538|ref|ZP_06628472.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis R712]
gi|293387861|ref|ZP_06632400.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis S613]
gi|307268069|ref|ZP_07549457.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX4248]
gi|307272003|ref|ZP_07553269.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX0855]
gi|307275472|ref|ZP_07556614.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX2134]
gi|307278960|ref|ZP_07560019.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX0860]
gi|307289409|ref|ZP_07569363.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX0109]
gi|312904551|ref|ZP_07763709.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX0635]
gi|312906859|ref|ZP_07765856.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis DAPTO 512]
gi|312952739|ref|ZP_07771601.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX0102]
gi|312978886|ref|ZP_07790612.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis DAPTO 516]
gi|384512686|ref|YP_005707779.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis OG1RF]
gi|422689654|ref|ZP_16747758.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX0630]
gi|422692279|ref|ZP_16750301.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX0031]
gi|422698185|ref|ZP_16756105.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX1346]
gi|422699548|ref|ZP_16757412.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX1342]
gi|422703314|ref|ZP_16761136.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX1302]
gi|422705599|ref|ZP_16763395.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX0043]
gi|422711791|ref|ZP_16768718.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX0027]
gi|422713468|ref|ZP_16770218.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX0309A]
gi|422717505|ref|ZP_16774189.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX0309B]
gi|422721053|ref|ZP_16777658.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX0017]
gi|422727513|ref|ZP_16783954.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX0312]
gi|422729981|ref|ZP_16786376.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX0012]
gi|422730891|ref|ZP_16787272.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX0645]
gi|422735203|ref|ZP_16791477.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX1341]
gi|422739815|ref|ZP_16794981.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX2141]
gi|422868645|ref|ZP_16915183.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX1467]
gi|424671121|ref|ZP_18108136.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis 599]
gi|227175767|gb|EEI56739.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis HH22]
gi|229305951|gb|EEN71947.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis ATCC
29200]
gi|291080086|gb|EFE17450.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis R712]
gi|291082708|gb|EFE19671.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis S613]
gi|306499664|gb|EFM69027.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX0109]
gi|306504347|gb|EFM73558.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX0860]
gi|306507860|gb|EFM76988.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX2134]
gi|306511298|gb|EFM80302.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX0855]
gi|306515710|gb|EFM84237.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX4248]
gi|310627113|gb|EFQ10396.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis DAPTO 512]
gi|310629255|gb|EFQ12538.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX0102]
gi|310632064|gb|EFQ15347.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX0635]
gi|311288323|gb|EFQ66879.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis DAPTO 516]
gi|315031725|gb|EFT43657.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX0017]
gi|315034218|gb|EFT46150.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX0027]
gi|315144374|gb|EFT88390.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX2141]
gi|315149512|gb|EFT93528.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX0012]
gi|315153065|gb|EFT97081.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX0031]
gi|315156838|gb|EFU00855.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX0043]
gi|315157624|gb|EFU01641.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX0312]
gi|315162946|gb|EFU06963.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX0645]
gi|315165146|gb|EFU09163.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX1302]
gi|315168045|gb|EFU12062.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX1341]
gi|315171926|gb|EFU15943.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX1342]
gi|315173297|gb|EFU17314.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX1346]
gi|315574267|gb|EFU86458.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX0309B]
gi|315577395|gb|EFU89586.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX0630]
gi|315581578|gb|EFU93769.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX0309A]
gi|327534575|gb|AEA93409.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis OG1RF]
gi|329574359|gb|EGG55931.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX1467]
gi|402359681|gb|EJU94306.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis 599]
Length = 322
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 131/343 (38%), Positives = 183/343 (53%), Gaps = 32/343 (9%)
Query: 112 QQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
++ H V+L E +D + +VDCTLG AGHS ++ E D D AL
Sbjct: 7 EEFRHYTVLLKETVDGLQV-KPDGVYVDCTLGGAGHSEYLLTQLNEHGHLYAFDQDQKAL 65
Query: 172 AKARAHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSS 229
A A+ L + GQ TF K NFR+IK L + + VD IL DLG+SS
Sbjct: 66 AHAKTRLQKYVDKGQV-------TFIKSNFRNIKEELAE--HGVFH--VDGILYDLGVSS 114
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
Q++ ERGFS D PLDMRMD A L A +++N++ +E+ ++ YGEE +
Sbjct: 115 PQLDEAERGFSYHQDAPLDMRMDQDAPLTAREVVNTYSYSELVKIFFRYGEEKFSKQIAR 174
Query: 290 KIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESS 349
+I + R + + +TGELV++I++ P R+ G A R+FQA+RIAVNDEL +E S
Sbjct: 175 EIERVREKQPIETTGELVEIIKTAIPAPARRKGGH--PAKRIFQAIRIAVNDELGAVEES 232
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINET 409
L D LA GR+ VI+FHSLEDRIVK F +E ++D
Sbjct: 233 LEQAIDLLAKNGRISVITFHSLEDRIVKTMF---------------KEYSTVQDLPPGIP 277
Query: 410 WIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ + Q K++T++PI PS E N R RSAKLR+ +KI
Sbjct: 278 VVPEEFQP-ELKVITRKPILPSDSELSENNRSRSAKLRIAEKI 319
>gi|229019122|ref|ZP_04175956.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus AH1273]
gi|229025365|ref|ZP_04181783.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus AH1272]
gi|228735950|gb|EEL86527.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus AH1272]
gi|228742138|gb|EEL92304.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus AH1273]
Length = 302
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 126/316 (39%), Positives = 169/316 (53%), Gaps = 29/316 (9%)
Query: 136 SFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTF 195
++VDCTLG GHSS ++ + I D D A+ A+ +S +G+ +K+
Sbjct: 15 TYVDCTLGGGGHSSYLLSQLTDGGKLIAFDQDEIAIQNAKEKFSS--YGEQFVTVKS--- 69
Query: 196 AKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQA 255
NFR++ L ++ + VD IL DLG+SS Q++ PERGFS D PLDMRMD A
Sbjct: 70 --NFRYLSEKLHELG----ITEVDGILFDLGVSSPQLDTPERGFSYHHDAPLDMRMDQDA 123
Query: 256 SLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTP 315
L A D++NSW ++ R+ +YGEE + KI R + +TGELV+LI+ P
Sbjct: 124 PLTAYDVVNSWSYEQLVRIFFQYGEEKFSKQIVRKIEAYRENKAIETTGELVELIKEGIP 183
Query: 316 GMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRI 375
RR G A RVFQA+RIAVNDELK E +L + D + PGGR+ VI+FHSLEDRI
Sbjct: 184 A-PARRTGG-HPAKRVFQAIRIAVNDELKVFEEALESAIDMVKPGGRVSVITFHSLEDRI 241
Query: 376 VKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEE 435
K TF R I D K++T++PI PS E
Sbjct: 242 CKTTF------KRNSTTPQLPPGLPIIPDEFKPKL----------KLITRKPILPSDIEL 285
Query: 436 RLNCRCRSAKLRVIQK 451
N R RSAKLR+ +K
Sbjct: 286 EENNRARSAKLRIAEK 301
>gi|302389508|ref|YP_003825329.1| S-adenosyl-methyltransferase MraW [Thermosediminibacter oceani DSM
16646]
gi|302200136|gb|ADL07706.1| S-adenosyl-methyltransferase MraW [Thermosediminibacter oceani DSM
16646]
Length = 313
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 129/337 (38%), Positives = 181/337 (53%), Gaps = 31/337 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H PV+L E +++ + +VD TLG GH S I++ E IG+D D A+ AR
Sbjct: 5 HKPVLLEETINLLDP-KPGGVYVDATLGGGGHFSEILKRVGENGTVIGIDRDEDAVVNAR 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
+ Q+ H KN + I LG GVD ++ DLG+SS Q++
Sbjct: 64 ERFS-----QSPAATIVHDNFKNIKRIVYSLGL-------EGVDGVIFDLGVSSYQLDEE 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
RGFS + D PLDMRMD L A+D++N +E+ ++++EYGEE + I + R
Sbjct: 112 SRGFSYIKDAPLDMRMDRNQDLTAKDVVNKMTKSELAKIIKEYGEERWADRIAEFICEKR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +TGELV++I++ P R RR G A R FQALRI VN EL+ L +SL D
Sbjct: 172 KKKPIETTGELVEIIKAAIPA-RARR-GGPHPAKRTFQALRIYVNGELEILSASLKDAVD 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L PGGR+ VI+FHSLEDRIVK TF RE A+G +D + + +
Sbjct: 230 ILNPGGRICVITFHSLEDRIVKHTF-------RELAKG----CTCPKDSPLCTCKSERAL 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
KILT +P+ P+ +E N R RSAKLR +K+
Sbjct: 279 -----KILTPKPVCPTQDEIDANPRARSAKLRACEKL 310
>gi|253699149|ref|YP_003020338.1| S-adenosyl-methyltransferase MraW [Geobacter sp. M21]
gi|263455964|sp|C6DZJ8.1|RSMH_GEOSM RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|251773999|gb|ACT16580.1| S-adenosyl-methyltransferase MraW [Geobacter sp. M21]
Length = 312
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 138/338 (40%), Positives = 187/338 (55%), Gaps = 32/338 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKA 174
HI V+ EVL S ++ +VD TLG AGH+ I+ A PE +L IG D D A+A A
Sbjct: 6 HISVLPDEVLQALSP-KSGGVYVDGTLGGAGHAGLILTASAPEGRL-IGFDRDEEAIAVA 63
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
R L S+ G + +NF I L +I + G+D ++DLG+SS Q++
Sbjct: 64 RQRL-SVFGG------RVRIIHRNFAGIAQALAEIGVD----GIDGFVLDLGVSSHQLDR 112
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS + D PLDMRMD + A D++N+ P+AE+ R++ EYGEE + + IV+A
Sbjct: 113 DERGFSFMHDAPLDMRMDRSSGQSAADLVNTLPEAELYRIISEYGEERWAKRVASFIVKA 172
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +T ELVD+I+ P + + + + ATR FQALRIAVN+ELK+LE L
Sbjct: 173 RDERPIETTLELVDVIKGAIP--KAKWEERLHPATRTFQALRIAVNEELKSLEEGLQGLL 230
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
L GGR VISFHSLEDRIVK+ F R A G E I
Sbjct: 231 SLLKQGGRGAVISFHSLEDRIVKEGF-------RAAATGC---------TCPKELPICVC 274
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ K++T++PIT E N R RSAKLRV++KI
Sbjct: 275 GRVPRFKLVTRKPITAGESEVAANPRSRSAKLRVVEKI 312
>gi|227891048|ref|ZP_04008853.1| S-adenosyl-methyltransferase [Lactobacillus salivarius ATCC 11741]
gi|227867137|gb|EEJ74558.1| S-adenosyl-methyltransferase [Lactobacillus salivarius ATCC 11741]
Length = 323
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 131/337 (38%), Positives = 178/337 (52%), Gaps = 28/337 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+L E +D + + ++VDCTLG GHS I+ E D D +A+
Sbjct: 15 HITVLLNEAVDGLNI-KPDGTYVDCTLGGGGHSGLILSKLSENGKLYSFDQDITAI---- 69
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
+ N + + K + NFR+I L + NIL GVD IL DLG+SS Q +N
Sbjct: 70 -NFNKDKFKEENELGKINFIKSNFRNISEELNK--RNIL--GVDGILYDLGVSSPQFDNA 124
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
+RGFS D PLDMRMD SL A D++N W ++ R+ YGEE + +I + R
Sbjct: 125 DRGFSYNYDAPLDMRMDQSQSLTARDVVNDWSYEQLVRIFFRYGEEKFAKSIARRIEKVR 184
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +TG+LVDLI+ P + RR+G A + FQA+RIAVNDEL LE SL D
Sbjct: 185 QQTPIETTGQLVDLIKEAIPA-KARRKGG-HPAKKTFQAIRIAVNDELGALEESLEQALD 242
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L PGGR+ VI+F SLEDR+VK F + L I D
Sbjct: 243 LLNPGGRISVITFQSLEDRLVKVMF-----KQKTSLPELPPGLPVIPDS----------- 286
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
Q K++T++PI PS +E N R SAKLR+I+K+
Sbjct: 287 QKVEYKLITRKPIVPSEDEITHNNRAHSAKLRIIEKL 323
>gi|205373089|ref|ZP_03225894.1| S-adenosyl-methyltransferase MraW [Bacillus coahuilensis m4-4]
Length = 311
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 134/339 (39%), Positives = 178/339 (52%), Gaps = 34/339 (10%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
+H V+L E +D + +VDCTLG AGHS ++ E D D +AL A
Sbjct: 3 NHTTVLLRETVDELKI-KPNGIYVDCTLGGAGHSEYLLSQLGEGGHLFAFDQDETALRHA 61
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
LN+ K NFR++KS L N+ GVD IL DLG+SS Q++
Sbjct: 62 AEKLNAYSD-------KVTYVKSNFRYLKSEL----TNLGVMGVDGILYDLGVSSPQLDT 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
PERGFS D PLDMRMD Q ++ A +++N W ++ R+ +YGEE + KI A
Sbjct: 111 PERGFSYHHDAPLDMRMDLQGAVSAYEVVNEWSYEKLVRIFFQYGEEKFSKQIARKIEAA 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +TGELV+LI+ P R+ G A R+FQA+RIAVNDEL E S
Sbjct: 171 REVNPIETTGELVELIKEGIPAPARRKGG--HPAKRIFQAIRIAVNDELTAFEDSAKDGI 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
L GGR+ VI+FHSLEDRI K F +E ++G E + I
Sbjct: 229 QLLHKGGRMSVITFHSLEDRICKNLF-------KEYSKGPE-----------LPPGLPII 270
Query: 415 IQGWNG--KILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+G+ KI+T++PI PS EE N R RSAKLRV +K
Sbjct: 271 PEGYEPKLKIVTRKPILPSDEELAHNNRSRSAKLRVAEK 309
>gi|294501027|ref|YP_003564727.1| S-adenosyl-methyltransferase MraW [Bacillus megaterium QM B1551]
gi|384045119|ref|YP_005493136.1| s-adenosylmethionine-dependent methyltransferase involved in cell
envelope biogenesis-like protein [Bacillus megaterium
WSH-002]
gi|294350964|gb|ADE71293.1| S-adenosyl-methyltransferase MraW [Bacillus megaterium QM B1551]
gi|345442810|gb|AEN87827.1| S-adenosylmethionine-dependent methyltransferase involved in cell
envelope biogenesis-like protein [Bacillus megaterium
WSH-002]
Length = 311
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 124/329 (37%), Positives = 170/329 (51%), Gaps = 55/329 (16%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
+VDCTLG AGHS I++ E I D D ALA A+ L P+L
Sbjct: 24 YVDCTLGGAGHSEYIVKQLSEKGKLIAFDQDDVALANAKEKLA--------PYLDRVILI 75
Query: 197 K-NFRHIKSVLGQIDENILRSG---VDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMD 252
K NFR++K E +++ G VD +L DLG+SS Q++ PERGFS D PLDMRMD
Sbjct: 76 KSNFRYLK-------EQLMKHGIEEVDGVLFDLGVSSPQLDTPERGFSFHHDAPLDMRMD 128
Query: 253 PQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQS 312
+ A +++N WP ++ ++ +YGEE + KI R + +T ELVDLI+
Sbjct: 129 QNSMFSAYNVVNEWPYEKLVKIFFQYGEEKFSKQIARKIEAYRESKPIETTLELVDLIKD 188
Query: 313 VTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLE 372
P RR G A R+FQA+RIAVNDEL+ E ++ D + GGR+ VI+FHSLE
Sbjct: 189 GIPA-PARRTGG-HPAKRIFQAIRIAVNDELQVFEDAIEQAMDVIKKGGRVSVITFHSLE 246
Query: 373 DRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGW---------NGKIL 423
DRI K F N + + Q+ G K++
Sbjct: 247 DRICKVAFK-------------------------NASTVPQLPHGLPIIPEEFKPKMKVI 281
Query: 424 TKRPITPSAEEERLNCRCRSAKLRVIQKI 452
T++PI PS EE N R RSAKLR+++K+
Sbjct: 282 TRKPILPSEEEIEENKRARSAKLRIVEKL 310
>gi|417810096|ref|ZP_12456776.1| S-adenosyl-methyltransferase [Lactobacillus salivarius GJ-24]
gi|418961545|ref|ZP_13513431.1| 16S rRNA m(4)C1402 methyltransferase [Lactobacillus salivarius
SMXD51]
gi|335349968|gb|EGM51466.1| S-adenosyl-methyltransferase [Lactobacillus salivarius GJ-24]
gi|380344077|gb|EIA32424.1| 16S rRNA m(4)C1402 methyltransferase [Lactobacillus salivarius
SMXD51]
Length = 314
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 131/337 (38%), Positives = 178/337 (52%), Gaps = 28/337 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+L E +D + + ++VDCTLG GHS I+ E D D +A+
Sbjct: 6 HITVLLNEAVDGLNI-KPDGTYVDCTLGGGGHSGLILSKLSENGKLYSFDQDITAI---- 60
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
+ N + + K + NFR+I L + NIL GVD IL DLG+SS Q +N
Sbjct: 61 -NFNKDKFKEENELGKINFIKSNFRNISEELNK--RNIL--GVDGILYDLGVSSPQFDNA 115
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
+RGFS D PLDMRMD SL A D++N W ++ R+ YGEE + +I + R
Sbjct: 116 DRGFSYNYDAPLDMRMDQSQSLTARDVVNDWSYEQLVRIFFRYGEEKFAKSIARRIEKVR 175
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +TG+LVDLI+ P + RR+G A + FQA+RIAVNDEL LE SL D
Sbjct: 176 QQTPIETTGQLVDLIKEAIPA-KARRKGG-HPAKKTFQAIRIAVNDELGALEESLEQALD 233
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L PGGR+ VI+F SLEDR+VK F + L I D
Sbjct: 234 LLNPGGRISVITFQSLEDRLVKVMF-----KQKTSLPELPPGLPVIPDS----------- 277
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
Q K++T++PI PS +E N R SAKLR+I+K+
Sbjct: 278 QKVEYKLITRKPIVPSEDEITHNNRAHSAKLRIIEKL 314
>gi|417788491|ref|ZP_12436174.1| rRNA small subunit methyltransferase H [Lactobacillus salivarius
NIAS840]
gi|334308668|gb|EGL99654.1| rRNA small subunit methyltransferase H [Lactobacillus salivarius
NIAS840]
Length = 314
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 131/337 (38%), Positives = 178/337 (52%), Gaps = 28/337 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+L E +D + + ++VDCTLG GHS I+ E D D +A+
Sbjct: 6 HITVLLNEAVDGLNI-KPDGTYVDCTLGGGGHSGLILSKLSENGKLYSFDQDITAI---- 60
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
+ N + + K + NFR+I L + NIL GVD IL DLG+SS Q +N
Sbjct: 61 -NFNKDKFKEENELGKINFIKSNFRNISEELNK--RNIL--GVDGILYDLGVSSPQFDNA 115
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
+RGFS D PLDMRMD SL A D++N W ++ R+ YGEE + +I + R
Sbjct: 116 DRGFSYNYDAPLDMRMDQSQSLTARDVVNDWSYEQLVRIFFRYGEEKFARSIARRIEKVR 175
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +TG+LVDLI+ P + RR+G A + FQA+RIAVNDEL LE SL D
Sbjct: 176 QQTPIETTGQLVDLIKEAIPA-KARRKGG-HPAKKTFQAIRIAVNDELGALEESLEQALD 233
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L PGGR+ VI+F SLEDR+VK F + L I D
Sbjct: 234 LLNPGGRISVITFQSLEDRLVKVMF-----KQKTSLPELPPGLPVIPDS----------- 277
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
Q K++T++PI PS +E N R SAKLR+I+K+
Sbjct: 278 QKVEYKLITRKPIVPSEDEITHNNRAHSAKLRIIEKL 314
>gi|357037249|ref|ZP_09099049.1| Ribosomal RNA small subunit methyltransferase H [Desulfotomaculum
gibsoniae DSM 7213]
gi|355361414|gb|EHG09169.1| Ribosomal RNA small subunit methyltransferase H [Desulfotomaculum
gibsoniae DSM 7213]
Length = 328
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 132/338 (39%), Positives = 186/338 (55%), Gaps = 32/338 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HIP+M+GEVL + FVDCT+G GH+ A++++ +G+D D ALA A
Sbjct: 12 HIPIMVGEVLTGLNPG-AAGVFVDCTVGGGGHACALLKSTGSGVHLVGLDQDADALAAAG 70
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L+ P + + NF+ I VL E + VD L DLG+SS Q++N
Sbjct: 71 EKLS--------PFTGRYILVRSNFKEIPRVL----EELGLDTVDGFLFDLGVSSYQLDN 118
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
P RGFS + D PLDMRMD + A D++N + E+ +++ YGEE + I+++
Sbjct: 119 PGRGFSYMHDAPLDMRMDTAGPVTARDLVNELSEQELASIIKRYGEERWASKIAAYIIKS 178
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +TG+LV++I+ P R RR+G A R FQALRIAVN+EL L +L A
Sbjct: 179 RKHNEISTTGDLVEIIKKAIPA-RARREGP-HPAKRTFQALRIAVNNELDILTGALQAAV 236
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
+ L PGGRL VI+FHSLEDRI K+TF + + + +
Sbjct: 237 ERLKPGGRLCVITFHSLEDRIAKETFKELAQPCKCPP----------------QFPVCVC 280
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
Q K++T+RPITPS+EE N R RSAKLRV++KI
Sbjct: 281 GQKPQIKLVTRRPITPSSEELNENPRARSAKLRVVEKI 318
>gi|227517912|ref|ZP_03947961.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX0104]
gi|424679117|ref|ZP_18115948.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis ERV103]
gi|424682291|ref|ZP_18119066.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis ERV116]
gi|424684066|ref|ZP_18120794.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis ERV129]
gi|424686867|ref|ZP_18123529.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis ERV25]
gi|424690063|ref|ZP_18126599.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis ERV31]
gi|424692277|ref|ZP_18128780.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis ERV37]
gi|424698015|ref|ZP_18134323.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis ERV41]
gi|424700542|ref|ZP_18136726.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis ERV62]
gi|424705570|ref|ZP_18141600.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis ERV63]
gi|424712432|ref|ZP_18144615.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis ERV65]
gi|424716256|ref|ZP_18145569.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis ERV68]
gi|424721643|ref|ZP_18150725.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis ERV72]
gi|424723694|ref|ZP_18152649.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis ERV73]
gi|424729474|ref|ZP_18158075.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis ERV81]
gi|424735091|ref|ZP_18163564.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis ERV85]
gi|424751812|ref|ZP_18179833.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis ERV93]
gi|424757118|ref|ZP_18184882.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis R508]
gi|227074666|gb|EEI12629.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX0104]
gi|402349341|gb|EJU84292.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis ERV116]
gi|402349398|gb|EJU84348.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis ERV103]
gi|402363002|gb|EJU97512.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis ERV129]
gi|402365197|gb|EJU99623.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis ERV31]
gi|402366574|gb|EJV00944.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis ERV25]
gi|402373633|gb|EJV07704.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis ERV62]
gi|402373924|gb|EJV07972.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis ERV41]
gi|402378668|gb|EJV12506.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis ERV37]
gi|402378994|gb|EJV12815.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis ERV63]
gi|402380926|gb|EJV14665.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis ERV65]
gi|402388449|gb|EJV21888.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis ERV68]
gi|402390810|gb|EJV24131.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis ERV72]
gi|402393928|gb|EJV27134.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis ERV81]
gi|402397403|gb|EJV30421.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis ERV73]
gi|402404708|gb|EJV37324.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis ERV85]
gi|402405308|gb|EJV37905.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis ERV93]
gi|402407646|gb|EJV40163.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis R508]
Length = 322
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 131/343 (38%), Positives = 182/343 (53%), Gaps = 32/343 (9%)
Query: 112 QQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
++ H V+L E +D + +VDCTLG AGHS ++ E D D AL
Sbjct: 7 EEFRHYTVLLKETVDGLQV-KPDGVYVDCTLGGAGHSEYLLTQLNEHGHLYAFDQDQKAL 65
Query: 172 AKARAHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSS 229
A A+ L + GQ TF K NFR+IK L + + VD IL DLG+SS
Sbjct: 66 AHAKTRLQKYVDKGQV-------TFIKSNFRNIKEELAE--HGVFH--VDGILYDLGVSS 114
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
Q++ ERGFS D PLDMRMD A L A +++N++ E+ ++ YGEE +
Sbjct: 115 PQLDEAERGFSYHQDAPLDMRMDQDAPLTAREVVNTYSYGELVKIFFRYGEEKFSKQIAR 174
Query: 290 KIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESS 349
+I + R + + +TGELV++I++ P R+ G A R+FQA+RIAVNDEL +E S
Sbjct: 175 EIERVREKQPIETTGELVEIIKTAIPAPARRKGGH--PAKRIFQAIRIAVNDELGAVEES 232
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINET 409
L D LA GR+ VI+FHSLEDRIVK F +E ++D
Sbjct: 233 LEQAIDLLAKNGRISVITFHSLEDRIVKTMF---------------KEYSTVQDLPPGIP 277
Query: 410 WIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ + Q K++T++PI PS E N R RSAKLR+ +KI
Sbjct: 278 VVPEEFQP-ELKVITRKPILPSDSELSENNRSRSAKLRIAEKI 319
>gi|126649733|ref|ZP_01721969.1| S-adenosyl-methyltransferase MraW [Bacillus sp. B14905]
gi|126593452|gb|EAZ87397.1| S-adenosyl-methyltransferase MraW [Bacillus sp. B14905]
Length = 316
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 132/343 (38%), Positives = 185/343 (53%), Gaps = 42/343 (12%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + +VDCTLG AGHS ++ + I D D +A+ A+
Sbjct: 4 HTTVLLKETVDGLNIDPD-GVYVDCTLGGAGHSEYLVHQLSDKGRLICFDQDMTAIENAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFA-KNFRHIKSVLGQIDENILRSG---VDAILMDLGMSSMQ 231
L P+++ TF NFR++K E +L G VD IL DLG+SS Q
Sbjct: 63 IRLA--------PYIERVTFIHSNFRYLK-------EELLAHGFEQVDGILYDLGVSSPQ 107
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ PERGFS D PLDMRMD A+L A +++N W ++ R+ YGEE + KI
Sbjct: 108 LDTPERGFSYHHDAPLDMRMDQTATLTAFEVVNQWAYEDLVRIFFRYGEEKFSKQVARKI 167
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
+AR + +TG+LV+LI+ P R+ G A R+FQA+RIAVNDEL E SL
Sbjct: 168 EEARKSAPIETTGQLVELIKEGIPAAARRKGG--HPAKRIFQAIRIAVNDELGAAEDSLV 225
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIR--DDNINET 409
D + GGR+ VI+FHSLEDR+ K F ++A E N+ D++ T
Sbjct: 226 DAIDMINVGGRISVITFHSLEDRLCKTIF--------KEASSLPELPPNLPVIPDDMKPT 277
Query: 410 WIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
K+++++PI PS EE +N R RSAKLRV++KI
Sbjct: 278 L----------KLISRKPILPSDEELEVNNRARSAKLRVVEKI 310
>gi|259047019|ref|ZP_05737420.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Granulicatella adiacens ATCC 49175]
gi|259036338|gb|EEW37593.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Granulicatella adiacens ATCC 49175]
Length = 314
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 132/337 (39%), Positives = 179/337 (53%), Gaps = 28/337 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+L E +D S + +VDCTLG AGHS ++ L+ D D A+ A+
Sbjct: 4 HITVLLHETVDALSI-KPDGIYVDCTLGGAGHSQYLLSQLTTGHLYC-FDQDMQAIQHAK 61
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
A L + K NFR +K LG++ S VD IL DLG+SS Q++
Sbjct: 62 ARL-----AKEVSEGKVTFIHANFRQLKIELGKLG----VSKVDGILYDLGVSSPQLDQI 112
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS + LDMRMD A L AE+I+N W E+ R+ YGEE + I + R
Sbjct: 113 ERGFSYHQNAKLDMRMDQSAPLTAEEIVNEWSYDELVRIFYRYGEEKFSKQIARNIERIR 172
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +TGELVD+I+ P R+ G A R+FQA+RIAVNDEL +E SL F+
Sbjct: 173 AQHRIETTGELVDIIRDSIPAAARRKGGH--PAKRIFQAIRIAVNDELAAIEDSLEQAFE 230
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
++ GGR+ VISFHSLEDRIVK F + E + L + + +
Sbjct: 231 VVSVGGRISVISFHSLEDRIVKTMF-----KQQSTVEKAPKNLPILPTEEEKAPF----- 280
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+++ K+PI PS EE N R +SAKLRVI+KI
Sbjct: 281 -----QLVNKKPILPSLEEITENSRSQSAKLRVIEKI 312
>gi|229162854|ref|ZP_04290811.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus R309803]
gi|228620736|gb|EEK77605.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Bacillus
cereus R309803]
Length = 310
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 131/336 (38%), Positives = 180/336 (53%), Gaps = 30/336 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D + ++VDCTLG GHSS ++ + I D D A+ A+
Sbjct: 4 HVTVLLKETVDGLDI-KPGGTYVDCTLGGGGHSSYLLSQLTDGGKLIAFDQDEIAIQNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
S +G+ +K+ NFR++ L ++ + VD IL DLG+SS Q++ P
Sbjct: 63 EKFAS--YGEQFVTVKS-----NFRYLSEKLQELG----IAEVDGILFDLGVSSPQLDTP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD A L A D++NSW ++ R+ +YGEE + KI R
Sbjct: 112 ERGFSYHHDAPLDMRMDQDAPLTAYDVVNSWSYEQLVRIFFQYGEEKFSKQIARKIEAYR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +TGELV+LI+ P RR G A RVFQA+RIAVNDELK E +L +
Sbjct: 172 ENKAIETTGELVELIKEGIPA-PARRTGG-HPAKRVFQAIRIAVNDELKVFEEALESAIS 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
+ PGGR+ VI+FHSLEDRI K TF R I I E + ++
Sbjct: 230 MVKPGGRISVITFHSLEDRICKTTF------KRNSTTPQLPPGLPI----IPEEFKPKL- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PI PS E N R RSAKLR+ +K
Sbjct: 279 -----KLITRKPILPSDIELEENNRARSAKLRIAEK 309
>gi|410697096|gb|AFV76164.1| S-adenosyl-methyltransferase MraW [Thermus oshimai JL-2]
Length = 283
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 130/337 (38%), Positives = 178/337 (52%), Gaps = 63/337 (18%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HIPV+ E LD+ + R +VD TLG AGH+ I+ + IG+D DP A+A+A
Sbjct: 6 HIPVLYEEALDLLAV-RPGGLYVDATLGGAGHTRGILERGGRV---IGLDQDPEAIARA- 60
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
P + T + NFRH+K VL + + VD +L DLG+SS + +
Sbjct: 61 ------------PKIPGLTVVESNFRHLKKVL----QGLGVERVDGVLADLGVSSFHLED 104
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
P+RGFS +GPLDMRM + A++++N E+ R+LREYGEE + + IV+A
Sbjct: 105 PKRGFSYAKEGPLDMRMGGEGP-TAKEVVNRLSLEELYRILREYGEEPRAYRIAQAIVEA 163
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + + +T EL ++++ G RQ A + FQALRI VNDEL LE L
Sbjct: 164 RAKAPIETTTELAEIVRKAV----GFRQAG-HPARKTFQALRIYVNDELGALEDFLKQAA 218
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
+ LAPGGRL VISFHSLEDR+VK R +R+ +
Sbjct: 219 EVLAPGGRLVVISFHSLEDRVVK---------------------RFLRESGL-------- 249
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
++LTK+PITP AEE N R RSAKLR +K
Sbjct: 250 ------RVLTKKPITPKAEEVAQNPRARSAKLRAAEK 280
>gi|15615138|ref|NP_243441.1| hypothetical protein BH2575 [Bacillus halodurans C-125]
gi|20139210|sp|Q9K9S0.1|RSMH_BACHD RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|10175196|dbj|BAB06294.1| BH2575 [Bacillus halodurans C-125]
Length = 310
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 126/318 (39%), Positives = 175/318 (55%), Gaps = 35/318 (11%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
+VDCTLG AGHS I++ D D AL+ A+ L+ P+ + T
Sbjct: 24 YVDCTLGGAGHSQEIVKQLTGGGHLYAFDQDQYALSHAKETLS--------PYRGSFTLI 75
Query: 197 K-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQA 255
+ NFR+++ L E + VD +L DLG+SS Q++ ERGFS D PLDMRM+
Sbjct: 76 ESNFRYMREKL----EELGVHHVDGVLFDLGVSSPQLDEDERGFSYHRDAPLDMRMNRSQ 131
Query: 256 SLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTP 315
SL A +++N W E+ +++ YGEE + KI Q+R + + +TGELVD+I+ P
Sbjct: 132 SLSAYEVVNQWDFIELMKIISRYGEERFAKQIARKIEQSREKKPIRTTGELVDIIKEAIP 191
Query: 316 GMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRI 375
RR G A R FQA+RIAVNDEL E +L A D AP GR+ VI+FHSLEDRI
Sbjct: 192 AP-ARRTGG-HPAKRTFQAIRIAVNDELGAFEEALEAAIDLTAPKGRICVITFHSLEDRI 249
Query: 376 VKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNG--KILTKRPITPSAE 433
K+ F RE ++G + + I + + K++TK+PI P+AE
Sbjct: 250 CKEMF-------REASKGPD-----------VPPGLPVIPEEYKATLKLITKKPIVPTAE 291
Query: 434 EERLNCRCRSAKLRVIQK 451
E LN R RSAKLR+ +K
Sbjct: 292 EIELNNRARSAKLRIAEK 309
>gi|288818267|ref|YP_003432615.1| S-adenosyl-methyltransferase [Hydrogenobacter thermophilus TK-6]
gi|384129027|ref|YP_005511640.1| S-adenosyl-methyltransferase MraW [Hydrogenobacter thermophilus
TK-6]
gi|288787667|dbj|BAI69414.1| S-adenosyl-methyltransferase [Hydrogenobacter thermophilus TK-6]
gi|308751864|gb|ADO45347.1| S-adenosyl-methyltransferase MraW [Hydrogenobacter thermophilus
TK-6]
Length = 287
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 130/337 (38%), Positives = 177/337 (52%), Gaps = 51/337 (15%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HIPV+L E +D+ RT +VD T+G GH+ I+ P IG+D DP AL A
Sbjct: 2 HIPVLLKESVDLLVW-RTGGVYVDATVGLGGHTKGILERDPR-AFVIGIDRDPHALKLAE 59
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
+L + + NFR++ VL Q E I VD L DLG+S +Q+ +P
Sbjct: 60 ENLKDF-------EGRFCLYQANFRYLDEVLKQ--EGI--KEVDGFLFDLGVSMLQLKSP 108
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
RGFS D PLDMRM+P+ A ++N++ + ++ R+L+EYGEE N + IV R
Sbjct: 109 -RGFSFQRDEPLDMRMNPEDKKTAYQVINTYSERDLVRILKEYGEEPNASRIARAIVMHR 167
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +TGELV +I S+ P RGR + ATR+FQA+RI VN+EL +LE +L
Sbjct: 168 TKKPIETTGELVSIITSLIPYRRGR----VHPATRIFQAIRIEVNEELISLEEALEKTPR 223
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L GGRL VISFHSLEDRIVK F D
Sbjct: 224 FLKKGGRLVVISFHSLEDRIVKNFFKRHTD------------------------------ 253
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
K+LTK+PI P+ +E + N RSAKLR ++I
Sbjct: 254 ---IFKLLTKKPIRPTLQEMKKNPASRSAKLRAGERI 287
>gi|90962030|ref|YP_535946.1| S-adenosyl-methyltransferase MraW [Lactobacillus salivarius UCC118]
gi|385840610|ref|YP_005863934.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Lactobacillus salivarius CECT 5713]
gi|122448863|sp|Q1WT95.1|RSMH_LACS1 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|90821224|gb|ABD99863.1| S-adenosyl-methyltransferase [Lactobacillus salivarius UCC118]
gi|300214731|gb|ADJ79147.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Lactobacillus salivarius CECT 5713]
Length = 314
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 131/337 (38%), Positives = 178/337 (52%), Gaps = 28/337 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+L E +D + + ++VDCTLG GHS I+ E D D +A+
Sbjct: 6 HITVLLNEAVDGLNI-KPDGTYVDCTLGGGGHSGLILSKLSENGKLYSFDQDITAI---- 60
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
+ N + + K + NFR+I L + NIL GVD IL DLG+SS Q +N
Sbjct: 61 -NFNKDKFEEENELGKINFIKSNFRNISEELNK--RNIL--GVDGILYDLGVSSPQFDNA 115
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
+RGFS D PLDMRMD SL A D++N W ++ R+ YGEE + +I + R
Sbjct: 116 DRGFSYNYDAPLDMRMDQSQSLTARDVVNDWSYEQLVRIFFRYGEEKFAKSIARRIEKVR 175
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +TG+LVDLI+ P + RR+G A + FQA+RIAVNDEL LE SL D
Sbjct: 176 QQTPIETTGQLVDLIKEAIPA-KARRKGG-HPAKKTFQAIRIAVNDELGALEESLEQALD 233
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L PGGR+ VI+F SLEDR+VK F + L I D
Sbjct: 234 LLNPGGRISVITFQSLEDRLVKVMF-----KQKTSLPELPPGLPVIPDS----------- 277
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
Q K++T++PI PS +E N R SAKLR+I+K+
Sbjct: 278 QKVEYKLITRKPIVPSEDEITHNNRAHSAKLRIIEKL 314
>gi|296133667|ref|YP_003640914.1| S-adenosyl-methyltransferase MraW [Thermincola potens JR]
gi|296032245|gb|ADG83013.1| S-adenosyl-methyltransferase MraW [Thermincola potens JR]
Length = 319
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 127/339 (37%), Positives = 183/339 (53%), Gaps = 34/339 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+PVML E + + + +VDCTLG AGHS+ I++ +G+D D +A+A
Sbjct: 5 HVPVMLDESISHLNI-KPDGIYVDCTLGGAGHSAEILKKIQPNGFLVGIDQDINAIAAGE 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L ++ H NF I+ +L ++ I R VD +L DLG+SS Q++
Sbjct: 64 KRLKNIGSNYRLVH-------SNFNRIRDILEEL--GIYR--VDGVLFDLGVSSYQLDQI 112
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
+RGFS D PLDMRM+P + A ++N + E+ +++ EYGEE + IV+AR
Sbjct: 113 QRGFSYKVDAPLDMRMNPLEPVTARILVNGLTEDELAKIISEYGEERWARRIAKFIVEAR 172
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
R + +TG+LV++I++ P G R+ A R FQALRIAVNDEL +S+L +
Sbjct: 173 AREEISTTGQLVEIIKNAVPA--GARKEGPHPAKRTFQALRIAVNDELNKFKSALRDAIE 230
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
LAPGGR+ VISFHSLEDRI K+ F R++ + +
Sbjct: 231 VLAPGGRICVISFHSLEDRITKEMF------------------RDLAKECVCPPEFPVCT 272
Query: 416 QGWNG--KILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
G KI+T +PI PSA E N R RSAKLRV +++
Sbjct: 273 CGTVPMLKIITNKPIEPSAAEIERNPRARSAKLRVAERL 311
>gi|182417987|ref|ZP_02949294.1| S-adenosyl-methyltransferase MraW [Clostridium butyricum 5521]
gi|237667344|ref|ZP_04527328.1| S-adenosyl-methyltransferase MraW [Clostridium butyricum E4 str.
BoNT E BL5262]
gi|182378158|gb|EDT75693.1| S-adenosyl-methyltransferase MraW [Clostridium butyricum 5521]
gi|237655692|gb|EEP53248.1| S-adenosyl-methyltransferase MraW [Clostridium butyricum E4 str.
BoNT E BL5262]
Length = 310
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 131/346 (37%), Positives = 186/346 (53%), Gaps = 43/346 (12%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
+ H+ V+L E +D + +VDCTLG AGHSS I++ + L IG+D D AL
Sbjct: 2 EFKHVSVLLNECIDGLNIKED-GIYVDCTLGGAGHSSHILKHLSKNGLLIGIDQDTDALK 60
Query: 173 KARAHLNSLLHGQAHPHLK-THTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQ 231
A+ L + + ++K H+ NF +I S+L ++ VD ILMDLG+SS Q
Sbjct: 61 AAKERL------KDYDNVKYVHS---NFYNIDSILNELG----IEKVDGILMDLGVSSYQ 107
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++N ERGFS + D PLDMRM+ A I+N + + E+ +++R+YGEE + N I
Sbjct: 108 LDNAERGFSYMQDAPLDMRMNRDNDFSAYSIINDYSEEELYKIIRDYGEEKFAKRIANFI 167
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
V R + +T ELVD+I++ P + RR+G A R FQA+RI VN ELK L ++
Sbjct: 168 VNRRAEKPIETTFELVDIIKAAIPA-KARREGP-HPAKRTFQAIRIEVNSELKILNKTIE 225
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
+ L GR+ +I+FHSLEDRIVK F EL N T
Sbjct: 226 DGVNRLNKDGRMAIITFHSLEDRIVKLKF---------------RELEN------PCTCP 264
Query: 412 RQIIQGWNG-----KILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
R+ G K+L K+ I PS EE N R RSAK+RV++K+
Sbjct: 265 REFPMCICGKKPLVKVLNKKGIAPSKEEIEENPRSRSAKVRVVEKV 310
>gi|320161732|ref|YP_004174957.1| S-adenosyl-methyltransferase MraW [Anaerolinea thermophila UNI-1]
gi|319995586|dbj|BAJ64357.1| S-adenosyl-methyltransferase MraW [Anaerolinea thermophila UNI-1]
Length = 312
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 133/338 (39%), Positives = 179/338 (52%), Gaps = 37/338 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H PV+ E++ + +VD T+GA GH++ I+ A +G+D DP ALA A
Sbjct: 8 HRPVLYQEIILALRP-HSPGRYVDATVGAGGHAAGILEASSPKGELLGLDPDPQALALAS 66
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L+ + G+ + H ++ +K L + VD I+ DLG+SSMQ++ P
Sbjct: 67 QRLS--IFGE-----RVHLVQASYVTLKEQLAVLGWQ----EVDGIVFDLGVSSMQLDTP 115
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS +G LDMR DP AED++N P+ E+ R+L EYGEE + IVQAR
Sbjct: 116 ERGFSFSAEGKLDMRFDPCQDTTAEDLVNHLPEEELARILWEYGEERYARRIARAIVQAR 175
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
LH+T EL +L+ + G R R I ATR FQALRIAVN EL+ +E+ L +
Sbjct: 176 ---PLHTTRELAELVARIVGGKRER----IHPATRTFQALRIAVNRELEAIETVLPQAVE 228
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNI-NETWIRQI 414
CL GGRL VISFHSLEDR+VK F R RD E +
Sbjct: 229 CLKAGGRLAVISFHSLEDRLVKHFF-----------------RRESRDCLCPPEQPVCTC 271
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ + +T+ PI S EE R N R RSA+LRV +KI
Sbjct: 272 GHKASLREVTRHPIEASDEEVRENPRARSARLRVAEKI 309
>gi|226948790|ref|YP_002803881.1| S-adenosyl-methyltransferase MraW [Clostridium botulinum A2 str.
Kyoto]
gi|263446084|sp|C1FME6.1|RSMH_CLOBJ RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|226843346|gb|ACO86012.1| S-adenosyl-methyltransferase MraW [Clostridium botulinum A2 str.
Kyoto]
Length = 309
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/339 (36%), Positives = 181/339 (53%), Gaps = 36/339 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+L E +D + +VDCTLG GHS I++ IG+D D SA+ A+
Sbjct: 5 HISVLLEETIDSLNIKED-GVYVDCTLGGGGHSKEILKKLSHKGKLIGIDQDTSAIKAAK 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L + H NF +I S+L ++D + VD I+MDLG+SS Q++
Sbjct: 64 ERLKDY-ENVIYVH-------NNFYNIDSILEELDID----KVDGIIMDLGVSSYQLDEA 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
RGFS + D PLDMRM+ + +L A +++NS+ + E+ ++L+ YGEE + IV+ R
Sbjct: 112 SRGFSYMKDAPLDMRMNREENLSAYNVVNSYEEEELFKILKNYGEEKFSRKIARFIVEKR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +TGELV++I+ P + +R+G A R FQA+RI VN EL+ L ++ +
Sbjct: 172 TENPIETTGELVEIIRKAIPA-KFQREGH--PAKRTFQAIRIEVNKELQILNKAIEDSVN 228
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L GRL +I+FHSLEDRIVK F + + +
Sbjct: 229 RLNKDGRLSIITFHSLEDRIVKVKF------------------KELEKPCTCPPSFPICV 270
Query: 416 QGWNG--KILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
G KI+TK+PI PS EE+ +N R RSAKLRV +KI
Sbjct: 271 CGKEPQIKIITKKPIEPSKEEKEINSRSRSAKLRVCRKI 309
>gi|2149901|gb|AAC45631.1| unknown [Enterococcus faecalis]
Length = 319
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 130/343 (37%), Positives = 182/343 (53%), Gaps = 32/343 (9%)
Query: 112 QQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
++ H V+L E +D + +VDCT G AGHS ++ E D D AL
Sbjct: 4 EEFRHYTVLLKETVDGLQV-KPDGVYVDCTFGGAGHSEYLLTQLNEHGHLYAFDQDQKAL 62
Query: 172 AKARAHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSS 229
A A+ L + GQ TF K NFR+IK L + + VD IL DLG+SS
Sbjct: 63 AHAKTRLQKYVDKGQV-------TFIKSNFRNIKEELAE--HGVFH--VDGILYDLGVSS 111
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
Q++ ERGFS D PLDMRMD A L A +++N++ +E+ ++ YGEE +
Sbjct: 112 PQLDEAERGFSYHQDAPLDMRMDQDAPLTAREVVNTYSYSELVKIFFRYGEEKFSKQIAR 171
Query: 290 KIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESS 349
+I + R + + +TGELV++I++ P R+ G A R+FQA+RIAVNDEL +E S
Sbjct: 172 EIERVREKQPIETTGELVEIIKTAIPAPARRKGGH--PAKRIFQAIRIAVNDELGAVEES 229
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINET 409
L D LA GR+ VI+FHSLEDRIVK F +E ++D
Sbjct: 230 LEQAIDLLAKNGRISVITFHSLEDRIVKTMF---------------KEYSTVQDLPPGIP 274
Query: 410 WIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ + Q K++T++PI PS E N R RSAKLR+ +KI
Sbjct: 275 VVPEEFQP-ELKVITRKPILPSDSELSENNRSRSAKLRIAEKI 316
>gi|295706376|ref|YP_003599451.1| S-adenosyl-methyltransferase MraW [Bacillus megaterium DSM 319]
gi|294804035|gb|ADF41101.1| S-adenosyl-methyltransferase MraW [Bacillus megaterium DSM 319]
Length = 311
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 125/328 (38%), Positives = 170/328 (51%), Gaps = 53/328 (16%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
+VDCTLG AGHS I++ E I D D ALA A+ L P+L
Sbjct: 24 YVDCTLGGAGHSEYIVKQLSEKGKLIAFDQDDVALANAKEKLA--------PYLDRVILI 75
Query: 197 K-NFRHIKSVLGQ--IDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDP 253
K NFR++K L + I+E VD +L DLG+SS Q++ PERGFS D PLDMRMD
Sbjct: 76 KSNFRYLKEQLMEHGIEE------VDGVLFDLGVSSPQLDTPERGFSFHHDAPLDMRMDQ 129
Query: 254 QASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSV 313
+ A +++N WP ++ ++ +YGEE + KI R + +T ELVDLI+
Sbjct: 130 NSMFSAYNVVNEWPYEKLVKIFFQYGEEKFSKQIARKIEAYRESKPIETTLELVDLIKDG 189
Query: 314 TPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLED 373
P RR G A R+FQA+RIAVNDEL+ E ++ D + GGR+ VI+FHSLED
Sbjct: 190 IPA-PARRTGG-HPAKRIFQAIRIAVNDELQVFEDAIEQAMDVIKKGGRVSVITFHSLED 247
Query: 374 RIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGW---------NGKILT 424
RI K F N + + Q+ G K++T
Sbjct: 248 RICKVAFK-------------------------NASTVPQLPHGLPIIPEEFKPKMKVIT 282
Query: 425 KRPITPSAEEERLNCRCRSAKLRVIQKI 452
++PI PS EE N R RSAKLR+++K+
Sbjct: 283 RKPILPSEEEIEENKRARSAKLRIVEKL 310
>gi|260893420|ref|YP_003239517.1| S-adenosyl-methyltransferase MraW [Ammonifex degensii KC4]
gi|260865561|gb|ACX52667.1| S-adenosyl-methyltransferase MraW [Ammonifex degensii KC4]
Length = 291
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 127/333 (38%), Positives = 178/333 (53%), Gaps = 49/333 (14%)
Query: 120 MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLN 179
M+ EVL + + + +VDCT+G GH++AI+ + IG+D DP AL+ AR L
Sbjct: 1 MVKEVL-AYLAVKPGGVYVDCTVGGGGHAAAILAFIGDEGRLIGLDRDPEALSFARKRLG 59
Query: 180 SLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGF 239
+ + H +F + VL + GVD +L DLG+SS Q++ PERGF
Sbjct: 60 N--------DPRVHLVHASFADLAEVLAGLGVR----GVDGVLYDLGVSSYQLDRPERGF 107
Query: 240 SVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGG 299
+ D PLDMR DP + + A D++N + E+ ++RE+GEE + IV+AR R
Sbjct: 108 TYREDAPLDMRFDPSSPVTAADLVNRLEEKELACIIREFGEERWAKRIARFIVRARARRP 167
Query: 300 LHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAP 359
+ +TG+LV++I+ P RR+G A R FQALRIAVN EL+ L++SL DCL P
Sbjct: 168 ILTTGQLVEIIKEAIPAS-ARRRGP-HPARRTFQALRIAVNRELEALKASLPQAADCLKP 225
Query: 360 GGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWN 419
GGRL V+S+HSLEDR+VK F T +R
Sbjct: 226 GGRLVVLSYHSLEDRLVKGFFRQY-------------------------TCLRP------ 254
Query: 420 GKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
LTK+P+TPS EE + N R S KLR +KI
Sbjct: 255 ---LTKKPLTPSPEEVKQNPRASSCKLRAAEKI 284
>gi|21672883|ref|NP_660948.1| hypothetical protein CT0042 [Chlorobium tepidum TLS]
gi|25090698|sp|Q8KGC6.1|RSMH_CHLTE RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|21645935|gb|AAM71290.1| conserved hypothetical protein [Chlorobium tepidum TLS]
Length = 318
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 127/348 (36%), Positives = 182/348 (52%), Gaps = 41/348 (11%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPEL---KLHIGVDVDPS 169
Q H PV+ E + + + I ++D TLG GHS ++R L L +G+D D
Sbjct: 4 QDYHEPVLARESVSLLVTLPGI--YIDGTLGGGGHSLQLLRHLQTLNGDSLLVGIDQDTH 61
Query: 170 ALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG-----VDAILMD 224
AL A L + NF +K ++ E ++R V L+D
Sbjct: 62 ALEAAGKKLGEFGD-------RRRLVRGNFGMVKELV----EPMMRGAGNGLPVMGFLLD 110
Query: 225 LGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNW 284
LG+SS Q++ PERGFS L DGPLDMRMDP L A DI+N + +A + ++ YGEE
Sbjct: 111 LGVSSFQIDTPERGFSYLKDGPLDMRMDPDGPLTAADIVNGYEEAALAKLFFRYGEEPLG 170
Query: 285 HLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELK 344
+ IV AR L +TGEL ++I++ P R+ IKT +R++QALRI VNDEL
Sbjct: 171 GRIARAIVSARSSAPLTTTGELAEVIRAACP----RKDLAIKTLSRIYQALRIEVNDELG 226
Query: 345 TLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDD 404
LE +L F+ L+ GGR VIS+HSLEDRIVK+ F + + D
Sbjct: 227 VLEQALEDGFELLSSGGRFAVISYHSLEDRIVKRFFAA----------------KTSADW 270
Query: 405 NINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+R+ ++ ++ ++P+ +AEE N R RSA+LRVIQK+
Sbjct: 271 GPKGLALREPLKPAEAVLVVRKPLEATAEEISRNPRSRSARLRVIQKL 318
>gi|357008354|ref|ZP_09073353.1| 16S rRNA m(4)C1402 methyltranserfase [Paenibacillus elgii B69]
Length = 318
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 134/322 (41%), Positives = 171/322 (53%), Gaps = 35/322 (10%)
Query: 137 FVDCTLGAAGHSSAII-RAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTF 195
+VDCTLG AGHS I R PE L I D D +ALA AR L ++ +
Sbjct: 24 YVDCTLGGAGHSFEIASRLGPE-GLLIAFDQDDAALANARERLAPVMD-------RVKLV 75
Query: 196 AKNFRHIKSVLGQIDENILRSG---VDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMD 252
NFR+++ L Q+ LR G V+ IL DLG+SS Q++ +RGFS D LDMRMD
Sbjct: 76 RSNFRYLERELAQV-PRALRDGRPQVNGILFDLGVSSPQLDEADRGFSYNHDAELDMRMD 134
Query: 253 PQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQS 312
A L A DI+N W + E+ ++L EYGEE + I AR + + +TG+LVDLI+
Sbjct: 135 RTAPLTARDIVNEWSEQEIAKILFEYGEEKFSRRIAATIAAARAKAPIETTGQLVDLIKE 194
Query: 313 VTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLE 372
P RR G A R FQALRIAVNDEL E +L CLAPGGR VI+FHSLE
Sbjct: 195 SIPAA-ARRTGP-HPAKRSFQALRIAVNDELGAFEDALEQSIRCLAPGGRTAVITFHSLE 252
Query: 373 DRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNG--KILTKRPITP 430
DRI KQTF + + + G G K++ ++PI
Sbjct: 253 DRICKQTFAKYVAKCTCPPD------------------FPMCVCGSAGIVKLVNRKPIEA 294
Query: 431 SAEEERLNCRCRSAKLRVIQKI 452
AEE N R RSAKLR+ +K+
Sbjct: 295 GAEELEANPRARSAKLRIAEKL 316
>gi|403667709|ref|ZP_10933009.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Kurthia
sp. JC8E]
Length = 312
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 134/339 (39%), Positives = 181/339 (53%), Gaps = 32/339 (9%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
+H V+L E +D + R +VDCTLG AGHS ++ + I D D +A+ A
Sbjct: 3 NHTTVLLKETVDGLNI-RPDGIYVDCTLGGAGHSEYLVSQLSDEGRLICFDQDQTAIDHA 61
Query: 175 RAHLNSLLHGQAHPHLKTHTFA-KNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
+ L P+L TF NFR+IK L + + VD IL DLG+SS Q++
Sbjct: 62 KERLA--------PYLNRVTFVHSNFRNIKQELNALG----ITSVDGILYDLGVSSPQLD 109
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
N ERGFS D PLDMRMD A L A ++N W ++ R+ YGEE + KI
Sbjct: 110 NAERGFSYHQDAPLDMRMDQTAPLTAFHVVNEWAYEDLVRIFYRYGEEKFSKQVARKIEA 169
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +++TGELV+LI+ P R+ G A RVFQA+RIAVNDEL E SL
Sbjct: 170 AREQAPINTTGELVELIKEGIPAAARRKGG--HPAKRVFQAIRIAVNDELGAAEDSLQQA 227
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
D + GR+ VI+FHSLEDR+ K F +E ++ D I
Sbjct: 228 LDLIHVRGRVSVITFHSLEDRLCKVLF---------------KEKSSLPDLPPGLPVIPD 272
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+Q + K++T++PI PS EE N R RSAKLRVI++I
Sbjct: 273 YLQP-DFKLVTRKPILPSEEELEENNRSRSAKLRVIERI 310
>gi|403234899|ref|ZP_10913485.1| 16S rRNA m(4)C1402 methyltransferase [Bacillus sp. 10403023]
Length = 310
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 126/319 (39%), Positives = 167/319 (52%), Gaps = 35/319 (10%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
+VDCTLG AGHSS I D D A+ AR L +
Sbjct: 24 YVDCTLGGAGHSSYIASKLSNKGKLFAFDQDDIAIDHARDKLAK--------------YG 69
Query: 197 KNFRHIKSVLGQIDENILRSG---VDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDP 253
IKS I E + G VD IL DLG+SS Q++NPERGFS D PLDMRM+
Sbjct: 70 DIVTIIKSNFANITEKLHEHGITAVDGILFDLGVSSPQLDNPERGFSYHHDAPLDMRMNQ 129
Query: 254 QASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSV 313
+SL A D++N W ++ R+ +YGEE + KI AR + + +T ELVDLI+
Sbjct: 130 DSSLSAYDVVNHWSYEQMVRIFFQYGEEKFSKQIARKIEAAREKKPIETTLELVDLIKEG 189
Query: 314 TPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLED 373
P RR G A R+FQA+RIAVNDELK E ++H + LA GGR+ VI+FHSLED
Sbjct: 190 IPAA-ARRTGG-HPAKRIFQAIRIAVNDELKVFEDAIHQSIELLATGGRVSVITFHSLED 247
Query: 374 RIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAE 433
RI K F + +E I + + ++ K++T++PI PS E
Sbjct: 248 RICKVAF----------KKASEGPPLPPGLPIIPDEYKPKL------KLITRKPILPSEE 291
Query: 434 EERLNCRCRSAKLRVIQKI 452
E +N R RSAKLR+ +K+
Sbjct: 292 ELEVNKRARSAKLRIAEKL 310
>gi|389815984|ref|ZP_10207221.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Planococcus antarcticus DSM 14505]
gi|388465478|gb|EIM07795.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Planococcus antarcticus DSM 14505]
Length = 312
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 131/338 (38%), Positives = 181/338 (53%), Gaps = 30/338 (8%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
+H V+L E +D + R +VDCTLG AGHS +++ + D D +A+A A
Sbjct: 3 NHTTVLLHETVDSLNI-RPDGIYVDCTLGGAGHSEYLVQQLSDQGHLYCFDQDATAIAHA 61
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+ L+ LH H NF+++K L E VD IL DLG+SS Q++
Sbjct: 62 KEKLHDYLHRITFIH-------ANFKYLKEEL----EMYGVEKVDGILYDLGVSSPQLDT 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
PERGFS D PLDMRMD A L A ++N W ++ R+ YGEE + KI A
Sbjct: 111 PERGFSYHNDAPLDMRMDQSAELSAYHVVNEWSFEDLVRIFYRYGEEKFSKQIVRKIEAA 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + + +TG+LV+ I+ P R+ G A RVFQA+RIAVNDEL + E+SL
Sbjct: 171 REKHPIETTGQLVECIKDGIPAFARRKGG--HPAKRVFQAIRIAVNDELGSAETSLQDAI 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
D LA GGR+ VI+FHSLEDR+ K F ++A E N+ + + I
Sbjct: 229 DLLAIGGRISVITFHSLEDRLCKAIF--------KEASSLPELPPNL---PVIPEGMEPI 277
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ K++T++PI S EE N R RSAKLR+ +KI
Sbjct: 278 L-----KLITRKPILASEEELAHNNRSRSAKLRIAEKI 310
>gi|157364289|ref|YP_001471056.1| S-adenosyl-methyltransferase MraW [Thermotoga lettingae TMO]
gi|262825835|sp|A8F758.1|RSMH_THELT RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|157314893|gb|ABV33992.1| S-adenosyl-methyltransferase MraW [Thermotoga lettingae TMO]
Length = 292
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 186/339 (54%), Gaps = 55/339 (16%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+PVM+ EVL FS+ R + F+DCT+GA GHS AI+ + + + IG+DVD L+ A+
Sbjct: 5 HVPVMVKEVLSYFSNLRGV--FLDCTVGAGGHSEAIL-ENIKGSVVIGIDVDEEILSVAK 61
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L + L T+ + R VL Q+ V+ I+MDLG+S++Q+
Sbjct: 62 QRLKKY-ESEGRAKLLKATYVEAQR----VLSQLGVK----AVNGIIMDLGVSTLQLMKG 112
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWH-LLQNKIVQA 294
ERGF+ DGPLDMRMD L A DI+N W + ++ R+ EYGEE + + IV+
Sbjct: 113 ERGFAFSSDGPLDMRMDKTQRLTAYDIVNFWQENQLRRIFFEYGEEKRYAGRIARFIVKN 172
Query: 295 RLRGGLHSTGELVDLIQSVTPGM--RGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
R + +T +LV++I P R RR+ + ATRVFQA+RIAVN+EL+ L + L
Sbjct: 173 R---PVETTAKLVEVIARALPEKERRFRRRHF---ATRVFQAIRIAVNNELENLRNFLVQ 226
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
D L GR+ VISFHSLEDRIVK+ F SI +EL
Sbjct: 227 VPDILNQNGRIIVISFHSLEDRIVKEAFRSI------------QEL-------------- 260
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+LT++P+ PS EE R N + RSAK+R+ ++
Sbjct: 261 --------DVLTRKPVRPSLEEVRENPKARSAKMRIAER 291
>gi|354617444|ref|ZP_09034859.1| Ribosomal RNA small subunit methyltransferase H [Saccharomonospora
paurometabolica YIM 90007]
gi|353218203|gb|EHB83027.1| Ribosomal RNA small subunit methyltransferase H [Saccharomonospora
paurometabolica YIM 90007]
Length = 320
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 118/269 (43%), Positives = 156/269 (57%), Gaps = 18/269 (6%)
Query: 113 QSSHIPVMLGEVLDVFS---SSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPS 169
+++H PV+L VL +F+ + R T VD TLG GH+ A++ AHP+L+L IG D D
Sbjct: 5 EAAHQPVLLDRVLALFAPVVAGRAAT-VVDTTLGLGGHAEALLTAHPDLRL-IGFDRDTG 62
Query: 170 ALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSS 229
AL AR L + H + I +VLG++ S VD ILMDLG+SS
Sbjct: 63 ALDHARRRLAGFGDRVRYVH-------TTYDRIGTVLGELG----LSAVDGILMDLGVSS 111
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
MQ++ ERGF+ D PLDMRMDP A + A ++LN++P AE+ R+LREYGEE H +
Sbjct: 112 MQLDLAERGFAYSRDAPLDMRMDPTAGITAAEVLNTYPAAELTRILREYGEERFAHRIAR 171
Query: 290 KIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESS 349
+V R R ++ LV L+ P R G A R FQALRI VN EL L +
Sbjct: 172 AVVAERERAPFDTSERLVRLLHDTVPAASKRTGGH--PAKRTFQALRIEVNGELDILRVA 229
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQ 378
+ A D LA GGR+ V S+HSLEDRIVK+
Sbjct: 230 VPAAIDALAEGGRIVVESYHSLEDRIVKR 258
>gi|326791423|ref|YP_004309244.1| S-adenosyl-methyltransferase MraW [Clostridium lentocellum DSM
5427]
gi|326542187|gb|ADZ84046.1| S-adenosyl-methyltransferase MraW [Clostridium lentocellum DSM
5427]
Length = 311
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 125/340 (36%), Positives = 182/340 (53%), Gaps = 34/340 (10%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
H+ V+L E ++ + T +VD TLG AGH+ + E IG+D D +ALA +
Sbjct: 4 EHVSVLLNECIEGLAIKPNGT-YVDGTLGGAGHARVVCNYLTEEGHFIGIDQDKNALAVS 62
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L + K NF + VL E + GVD +L+DLG+SS Q++
Sbjct: 63 TERLKDV-------KPKVSIVNSNFEKVAEVL----EVLGIEGVDGMLIDLGVSSHQLDE 111
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
P RGFS + D PLDMRMD + A +++N + E+ R+++EYGEE + IV+
Sbjct: 112 PSRGFSYMHDAPLDMRMDQDGAYTAYEVVNDMAEEELFRIIKEYGEEKWAKRIAQFIVEE 171
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + + +T ELV++I+ P +G R+ A R FQA+RIAVN EL+ +E ++ A
Sbjct: 172 RKQKPIETTYELVEVIKKAIP--QGARKDGPHPAKRTFQAIRIAVNRELEIIEPTIKAIV 229
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
D L GGRL +I+FHSLEDRIVK F RN+ + I
Sbjct: 230 DKLNSGGRLCIITFHSLEDRIVKHAF------------------RNLENPCTCAPHIPIC 271
Query: 415 IQGWNG--KILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ G K++T++PI PS EE +N R RSAKLR+I+K+
Sbjct: 272 VCGKKPLVKVITRKPILPSDEEIEINPRSRSAKLRIIEKL 311
>gi|429765541|ref|ZP_19297826.1| S-adenosyl-methyltransferase MraW [Clostridium celatum DSM 1785]
gi|429185992|gb|EKY26955.1| S-adenosyl-methyltransferase MraW [Clostridium celatum DSM 1785]
Length = 310
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 126/340 (37%), Positives = 182/340 (53%), Gaps = 31/340 (9%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
+ +H+ V+L E L+ + + +VDCTLG AGHSS I++ IG+D D AL
Sbjct: 2 EFNHVSVLLNECLEALNI-KDDGIYVDCTLGGAGHSSEIVKRLSSEGRLIGIDQDKDALR 60
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
A G+ + K T N H +G I E + VD ILMDLG+SS Q+
Sbjct: 61 AA---------GERLHNFKNVTLVHNNFH---NIGAILEELEIEKVDGILMDLGVSSYQL 108
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ ERGFS + D PLDMRM+ + + A D++N + + E+ R++R+YGEE + IV
Sbjct: 109 DEGERGFSYMKDAPLDMRMNRENNFSAYDVVNDYSEEELYRIIRDYGEEKFAKRIAKFIV 168
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
+ R + +T ELV++I++ P + RR+G A R FQA+RI VN EL L ++
Sbjct: 169 ERREEKAIETTLELVEIIKNAIPA-KARREGP-HPAKRTFQAIRIEVNSELSILNKAMED 226
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
+ L GGR+ +I+FHSLEDRIVK F + R E I
Sbjct: 227 GVNKLNKGGRMAIITFHSLEDRIVKNKFRDLAVSCR----------------CPKEFPIC 270
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ K+++++ I PS EE +N R RSAKLRVI+KI
Sbjct: 271 VCGEKAKVKVISRKAIEPSKEEVEINPRSRSAKLRVIEKI 310
>gi|260584184|ref|ZP_05851932.1| S-adenosyl-methyltransferase MraW [Granulicatella elegans ATCC
700633]
gi|260158810|gb|EEW93878.1| S-adenosyl-methyltransferase MraW [Granulicatella elegans ATCC
700633]
Length = 313
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 127/337 (37%), Positives = 179/337 (53%), Gaps = 28/337 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D + +VDCTLG AGHS ++ L+ D D +A+ A+
Sbjct: 4 HVTVLLHETVDNLEV-KPDGIYVDCTLGGAGHSEYLLGQLTTGHLYC-FDQDMNAIDNAK 61
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L + + K NFR I+ L ++ VD IL DLG+SS Q++
Sbjct: 62 IRLKNFI-----DEGKVTFIHANFRMIQKKLNELG----IKKVDGILYDLGVSSPQLDQI 112
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS + LDMRMD A L A++I+N W E+ R+ YGEE + I + R
Sbjct: 113 ERGFSYHQNAILDMRMDQTAPLTAKEIINEWSYDELVRIFYRYGEEKFSKQIARNIERIR 172
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
G+ +TGELVD+I+ P R+ G A R+FQA+RIAVNDEL +E SL FD
Sbjct: 173 QDHGIETTGELVDIIRDSIPAAARRKGG--HPAKRIFQAVRIAVNDELAAVEDSLEQAFD 230
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L GGR+ VISFHSLEDRIVK F ++ + N + +
Sbjct: 231 LLEVGGRISVISFHSLEDRIVKTMF---------------KQQSTVEQGPKNLPILPGQL 275
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ N K++T++PI P+ EE + N R +SAKLRVI+++
Sbjct: 276 ESANFKLITRKPILPTEEEMQENSRSQSAKLRVIERV 312
>gi|422722942|ref|ZP_16779491.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX2137]
gi|315026965|gb|EFT38897.1| S-adenosyl-methyltransferase MraW [Enterococcus faecalis TX2137]
Length = 322
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 131/343 (38%), Positives = 182/343 (53%), Gaps = 32/343 (9%)
Query: 112 QQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
++ H V+L E +D + +VDCTLG AGHS ++ E D D AL
Sbjct: 7 EEFRHYTVLLKETVDGLQV-KPDGVYVDCTLGGAGHSEYLLTQLNEHGHLYAFDQDQKAL 65
Query: 172 AKARAHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSS 229
A A+ L + GQ TF K NFR+IK L + + VD IL DLG+SS
Sbjct: 66 AHAKTRLQKYVDKGQV-------TFIKSNFRNIKEELAE--HGVFH--VDGILYDLGVSS 114
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
Q++ ERGFS D PLDMRMD A L A ++ N++ +E+ ++ YGEE +
Sbjct: 115 PQLDEAERGFSYHQDAPLDMRMDQDAPLTAREVGNTYSYSELVKIFFRYGEEKFSKQIAR 174
Query: 290 KIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESS 349
+I + R + + +TGELV++I++ P R+ G A R+FQA+RIAVNDEL +E S
Sbjct: 175 EIERVREKQPIETTGELVEIIKTAIPAPARRKGGH--PAKRIFQAIRIAVNDELGAVEES 232
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINET 409
L D LA GR+ VI+FHSLEDRIVK F +E ++D
Sbjct: 233 LEQAIDLLAKNGRISVITFHSLEDRIVKTMF---------------KEYSTVQDLPPGIP 277
Query: 410 WIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ + Q K++T++PI PS E N R RSAKLR+ +KI
Sbjct: 278 VVPEEFQP-ELKVITRKPILPSDSELSENNRSRSAKLRIAEKI 319
>gi|387817729|ref|YP_005678074.1| rRNA small subunit methyltransferase H [Clostridium botulinum
H04402 065]
gi|322805771|emb|CBZ03336.1| rRNAsmall subunit methyltransferase H [Clostridium botulinum H04402
065]
Length = 309
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 126/337 (37%), Positives = 182/337 (54%), Gaps = 32/337 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+L E +D + +VDCTLG GHS I++ IG+D D SA+ A+
Sbjct: 5 HISVLLEETIDSLNIKED-GVYVDCTLGGGGHSKEILKKLSHKGKLIGIDQDTSAIKAAK 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L + H NF +I S+L ++D + VD I+MDLG+SS Q++
Sbjct: 64 EKLKDY-ENIIYVH-------NNFYNIDSILEELDID----KVDGIIMDLGVSSYQLDEA 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
RGFS + D PLDMRM+ + + A +++NS+ + E+ ++L+ YGEE + IV+ R
Sbjct: 112 SRGFSYMKDAPLDMRMNREENFSAYNVVNSYEEEELFKILKNYGEEKFSRKIARFIVEKR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +TGELV++I+ P + +R+G A R FQA+RI VN EL+ L ++ +
Sbjct: 172 TENPIETTGELVEIIRKAIPA-KFQREGH--PAKRTFQAIRIEVNKELQILNKAIEDSVN 228
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L GRL +I+FHSLEDRIVK F E E + R+
Sbjct: 229 RLNKDGRLSIITFHSLEDRIVKVKF-------------KELEKPCTCPPSFPICVCRKEP 275
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
Q KI+TK+PI PS EE+ +N R RSAKLRV +KI
Sbjct: 276 Q---IKIITKKPIEPSKEEKEINSRSRSAKLRVCRKI 309
>gi|433446209|ref|ZP_20410268.1| S-adenosyl-methyltransferase MraW [Anoxybacillus flavithermus
TNO-09.006]
gi|432000505|gb|ELK21399.1| S-adenosyl-methyltransferase MraW [Anoxybacillus flavithermus
TNO-09.006]
Length = 310
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 182/339 (53%), Gaps = 34/339 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAII-RAHPELKLHIGVDVDPSALAKA 174
H+ V+L E +D + + T +VDCTLG AGHS ++ + PE +L D D A+ A
Sbjct: 4 HVTVLLKETVDGLNIKKDGT-YVDCTLGGAGHSEYLLSQLSPEGRL-FAFDQDDIAIRHA 61
Query: 175 RAHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
+ L GQ T K NFR++K L + VD IL DLG+SS Q++
Sbjct: 62 QQRLERY-RGQ-------FTIIKSNFRYLKQQLALYGVH----EVDGILFDLGVSSPQLD 109
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
PERGFS + PLDMRMD +L A D++N+W ++ ++ +YGEE + KI Q
Sbjct: 110 MPERGFSYQHEAPLDMRMDRDQTLTAYDVVNTWSYEQLVKIFFQYGEEKFSKAIARKIEQ 169
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
R + + +T EL ++I+ P RR G A RVFQA+RIAVNDEL+ E ++
Sbjct: 170 TRKQKPIETTTELAEVIKEAIPAP-ARRTGG-HPAKRVFQAIRIAVNDELRAFEEAIEQA 227
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
D L PGGR+ VI+FHSLEDRI K F + L I D+ +
Sbjct: 228 IDLLKPGGRISVITFHSLEDRICKIAF-----KQASETPHLPPGLPIIPDEYKPKL---- 278
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
KI+TK+PI PS EE + N R RSAKLR+ +K+
Sbjct: 279 -------KIITKKPIVPSEEELQHNHRARSAKLRIAEKL 310
>gi|374997244|ref|YP_004972743.1| S-adenosyl-methyltransferase MraW [Desulfosporosinus orientis DSM
765]
gi|357215610|gb|AET70228.1| S-adenosyl-methyltransferase MraW [Desulfosporosinus orientis DSM
765]
Length = 310
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 137/337 (40%), Positives = 180/337 (53%), Gaps = 31/337 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D ++ + +VDCTLG GHS II E I D D A+ AR
Sbjct: 5 HVTVLLEETVDSVITNPS-GRYVDCTLGGGGHSRKIIENMGEDGKLICFDQDEHAIHHAR 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
G L +NF H+++ L ++D +L VD I+ DLG+SS Q++
Sbjct: 64 ----ETFQGDGRVTL----VNRNFEHLEATLNELD--LL--PVDGIIFDLGVSSPQLDEA 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS + D PLDMRMD +L A +I+NSW + E+ +++ YGEE + IVQAR
Sbjct: 112 ERGFSYMQDAPLDMRMDSARALNAREIVNSWSEEELAQLIWTYGEEKWAKRIAQFIVQAR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
L +TG+LV I++ P RR G A R FQA+RI VNDEL L+ L
Sbjct: 172 QVRSLETTGDLVQAIKAAVPAA-VRRNG-PHPAKRTFQAIRIVVNDELGVLDRVLDQALR 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
CL GGR+GVI+FHSLEDRIVK+ S +G R E I +
Sbjct: 230 CLNHGGRIGVITFHSLEDRIVKERMRS--------WQG--------RCTCPPELPICRCD 273
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
K+LTK+PI PS EE N R RSAKLRV +KI
Sbjct: 274 AKTMAKVLTKKPILPSREEVEHNPRSRSAKLRVAEKI 310
>gi|170759536|ref|YP_001786877.1| S-adenosyl-methyltransferase MraW [Clostridium botulinum A3 str.
Loch Maree]
gi|263446098|sp|B1L164.1|RSMH_CLOBM RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|169406525|gb|ACA54936.1| S-adenosyl-methyltransferase MraW [Clostridium botulinum A3 str.
Loch Maree]
Length = 309
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 123/339 (36%), Positives = 179/339 (52%), Gaps = 36/339 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+L E +D + +VDCTLG GHS I++ IG+D D SA+ A+
Sbjct: 5 HISVLLEETIDSLNIKED-GVYVDCTLGGGGHSKEILKKLSHKGKLIGIDQDTSAIKAAK 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L + H NF +I S+L ++D + VD I+MDLG+SS Q++
Sbjct: 64 ERLKDY-ENVIYVH-------NNFYNIDSILEELDID----KVDGIIMDLGVSSYQLDEA 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
RGFS + D PLDMRM+ + + A +++NS+ + E+ R+ + YGEE + IV+ R
Sbjct: 112 SRGFSYMKDAPLDMRMNREENFSAYNVVNSYEEEELFRIFKNYGEEKFSRKIARFIVEKR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +TGELV++I+ P + +R+G A R FQA+RI VN EL+ L ++ +
Sbjct: 172 TENPIETTGELVEIIRKAIPA-KFQREGH--PAKRTFQAIRIEVNKELQILNKAIEDSVN 228
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L GRL +I+FHSLEDRIVK F + + +
Sbjct: 229 RLNKDGRLSIITFHSLEDRIVKVKF------------------KELEKPCTCPPSFPICV 270
Query: 416 QGWNG--KILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
G KI+TK+PI PS EE+ +N R RSAKLRV +KI
Sbjct: 271 CGKEPQIKIITKKPIEPSKEEKEINSRSRSAKLRVCRKI 309
>gi|153938691|ref|YP_001390802.1| S-adenosyl-methyltransferase MraW [Clostridium botulinum F str.
Langeland]
gi|384461855|ref|YP_005674450.1| S-adenosyl-methyltransferase MraW [Clostridium botulinum F str.
230613]
gi|263446093|sp|A7GDE2.1|RSMH_CLOBL RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|152934587|gb|ABS40085.1| S-adenosyl-methyltransferase MraW [Clostridium botulinum F str.
Langeland]
gi|295318872|gb|ADF99249.1| S-adenosyl-methyltransferase MraW [Clostridium botulinum F str.
230613]
Length = 309
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 123/339 (36%), Positives = 180/339 (53%), Gaps = 36/339 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+L E +D + +VDCTLG GHS I++ IG+D D SA+ A+
Sbjct: 5 HISVLLEETIDSLNIKED-GVYVDCTLGGGGHSKEILKKLSHKGKLIGIDQDTSAIKAAK 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L + H NF +I S+L ++D + VD I+MDLG+SS Q++
Sbjct: 64 EKLKDY-ENIIYVH-------NNFYNIDSILEELDID----KVDGIIMDLGVSSYQLDEA 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
RGFS + D PLDMRM+ + + A +++NS+ + E+ ++L+ YGEE + IV+ R
Sbjct: 112 SRGFSYMKDAPLDMRMNREENFSAYNVVNSYEEEELFKILKNYGEEKFSRKIARFIVEKR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +TGELV++I+ P + +R+G A R FQA+RI VN EL+ L ++ +
Sbjct: 172 TENPIETTGELVEIIRKAIPA-KFQREGH--PAKRTFQAIRIEVNKELQILNKAIEDSVN 228
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L GRL +I+FHSLEDRIVK F + + +
Sbjct: 229 RLNKDGRLSIITFHSLEDRIVKVKF------------------KELEKPCTCPPSFPICV 270
Query: 416 QGWNG--KILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
G KI+TK+PI PS EE+ +N R RSAKLRV +KI
Sbjct: 271 CGKEPQIKIITKKPIEPSKEEKEINSRSRSAKLRVCRKI 309
>gi|78043538|ref|YP_360897.1| S-adenosyl-methyltransferase MraW [Carboxydothermus
hydrogenoformans Z-2901]
gi|88909191|sp|Q3AAD7.1|RSMH_CARHZ RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|77995653|gb|ABB14552.1| S-adenosyl-methyltransferase MraW [Carboxydothermus
hydrogenoformans Z-2901]
Length = 311
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 131/343 (38%), Positives = 183/343 (53%), Gaps = 39/343 (11%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAII-RAHPELKLHIGVDVDPSAL 171
+ SH+PV+L E ++ + + +VD TLG GHS I+ RA + +G+D D AL
Sbjct: 2 EFSHVPVLLNETIEHLNL-KAGGVYVDATLGGGGHSEEILKRADCRV---VGLDQDEDAL 57
Query: 172 AKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQ 231
A L G +K+ NFR+I+ V+ ++ + VD +LMDLG+SS Q
Sbjct: 58 NHAAKRLAPF--GDRFIPVKS-----NFRNIRKVVYRLGLD----AVDGVLMDLGVSSFQ 106
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++NP +GFS DGPLDMRMDPQ A D++N++P+ E+ R+ EYGEE + I
Sbjct: 107 LDNPLKGFSFQHDGPLDMRMDPQNPKTAADVVNTYPEKELIRIFYEYGEERYAPQIARAI 166
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
V+ R + ST EL + I P + RR+ A RVFQA+RI VNDEL +LE L
Sbjct: 167 VKRREKKPFTSTLELAEEIIRAVPA-KARREKH--PAKRVFQAIRIEVNDELSSLEEGLV 223
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
+ L PGGR+ VI+FHSLEDR+VK F R + I
Sbjct: 224 GAVEVLKPGGRIVVITFHSLEDRLVKNFF------------------RREENPCICPKDF 265
Query: 412 RQIIQGWNG--KILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ G K++TK+P+ PS EE N R SAKLR +K+
Sbjct: 266 PMCVCGKKPRLKVITKKPLVPSEEEIEKNRRAHSAKLRAAEKL 308
>gi|220931744|ref|YP_002508652.1| S-adenosyl-methyltransferase MraW [Halothermothrix orenii H 168]
gi|263456084|sp|B8CWI8.1|RSMH_HALOH RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|219993054|gb|ACL69657.1| S-adenosyl-methyltransferase MraW [Halothermothrix orenii H 168]
Length = 311
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 125/340 (36%), Positives = 175/340 (51%), Gaps = 35/340 (10%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
H PV+L E LD ++D TLG GH+ II+A + L IG+D D A+
Sbjct: 3 EHKPVLLKESLDYLKCKEN-GIYIDATLGRGGHTEEIIKAINDRGLVIGIDRDHEAIESV 61
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+ L + T NF +I +L Q NI VD +L DLG+SS Q +N
Sbjct: 62 KKRLKK--------YSSLRTVHDNFTNIPFILEQF--NI--KAVDGMLFDLGVSSPQFDN 109
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
PERGFS +GPLDMRMD L AE I+N++ E+ + +EYGEE + N I+++
Sbjct: 110 PERGFSYRKEGPLDMRMDKNQELTAEYIVNNFSHEELTNIFKEYGEERWASRIANFIIKS 169
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +T +L +I+ P R+ G A R FQALRIA NDEL L+ +++
Sbjct: 170 RQHKPIKTTLQLTTIIKDAIPASARRKGGH--PARRTFQALRIATNDELNILKKTINHVV 227
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
L PGGR+ +ISFHSLEDRIVK+TF R + D + +
Sbjct: 228 KFLKPGGRICIISFHSLEDRIVKKTF------------------RELARDCVCPPDFPEC 269
Query: 415 I--QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ KI+TK+P+ P E N R RSA+LRV +++
Sbjct: 270 VCDHKRKLKIITKKPVKPGENEVENNPRARSARLRVAERV 309
>gi|256379773|ref|YP_003103433.1| S-adenosyl-methyltransferase MraW [Actinosynnema mirum DSM 43827]
gi|255924076|gb|ACU39587.1| S-adenosyl-methyltransferase MraW [Actinosynnema mirum DSM 43827]
Length = 316
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 158/272 (58%), Gaps = 20/272 (7%)
Query: 112 QQSSHIPVMLGEVLDVFS---SSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDP 168
+ + H+PV+L VL + + + R FVDCTLG GHS A+++AHP ++L IG+D DP
Sbjct: 3 EAARHVPVLLDRVLGLLAPALAGRDDAVFVDCTLGLGGHSEAVLKAHPGVRL-IGLDRDP 61
Query: 169 SALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMS 228
A+A A+A L FA +++ I E + VD ILMDLG+S
Sbjct: 62 QAIALAKARLAP--------------FADRVEFVQTTYDGIAEAVDGRRVDGILMDLGVS 107
Query: 229 SMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQ 288
S+Q++ ERGF+ D PLDMRM + A D+LN++P AE+ RVLR+YGEE +
Sbjct: 108 SLQLDARERGFAYSQDAPLDMRMSAGSGETAADVLNTYPAAELARVLRDYGEERFARKIA 167
Query: 289 NKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLES 348
+V+ R + ++G LV+L+ + P R G A R FQALRI VN EL++L +
Sbjct: 168 AAVVRERAKEPFTTSGRLVELLYASVPAATRRTGGH--PAKRTFQALRIEVNRELESLRA 225
Query: 349 SLHACFDCLAPGGRLGVISFHSLEDRIVKQTF 380
+L A LA GGR+ V S+ SLEDR+VK+
Sbjct: 226 ALPAALSVLAVGGRIVVESYQSLEDRMVKRAL 257
>gi|326391684|ref|ZP_08213209.1| S-adenosyl-methyltransferase MraW [Thermoanaerobacter ethanolicus
JW 200]
gi|325992262|gb|EGD50729.1| S-adenosyl-methyltransferase MraW [Thermoanaerobacter ethanolicus
JW 200]
Length = 308
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 125/345 (36%), Positives = 184/345 (53%), Gaps = 43/345 (12%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
+ SH V+L E ++ + + + +VD TLG GHS I++ KL I +D D A+
Sbjct: 2 EYSHKSVLLKETIE-YLNIKPEGIYVDGTLGGGGHSEEILKRLTTGKL-IAIDRDLDAIK 59
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
++ L + + NF++IK +L +D + VD IL+DLG+SS Q+
Sbjct: 60 ASKERLKN--------YKNVEYINDNFKNIKEILKSLDID----KVDGILLDLGVSSYQL 107
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
ERGFS + D PLDMRMD + A D++N + E+ RV+REYGEE + I
Sbjct: 108 EEVERGFSYMKDAPLDMRMDKNSPFSAYDVVNKYSQQELERVIREYGEEKWASRIAKFIA 167
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
+ R +G + +T +LV++I++ P RR+G A R FQA+RI VN+ELK L+ ++
Sbjct: 168 KEREKGEIKTTFQLVEIIKNAVPA-SARREGP-HPAKRTFQAIRIEVNEELKGLDKAIED 225
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIID-----HNREDAEGNEEELRNIRDDNIN 407
+ L GR+ +I+FHSLEDRIVK TF + + HN G E +
Sbjct: 226 MVEVLRGKGRIAIITFHSLEDRIVKNTFKKLENPCTCPHNMPCTCGKEPLI--------- 276
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
KI+TK+P+ PS EE N R RSAKLRV +K+
Sbjct: 277 -------------KIITKKPVLPSKEEIETNSRSRSAKLRVAEKL 308
>gi|431794717|ref|YP_007221622.1| S-adenosyl-methyltransferase MraW [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430784943|gb|AGA70226.1| S-adenosyl-methyltransferase MraW [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 310
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 126/337 (37%), Positives = 180/337 (53%), Gaps = 31/337 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E ++ + T +VDCTLG AGHS+ ++ +G+D DP A+ AR
Sbjct: 5 HVTVLLKETVEGVVKDPSGT-YVDCTLGGAGHSALLLSQLNNAGKLVGLDQDPLAIDNAR 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L + P + +NF ++ L ++ V IL DLG+SS Q++
Sbjct: 64 ------LKFKEDP--RVFLVNRNFESLEESLQALE----LLPVQGILFDLGVSSPQLDEA 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS + D LDMRM+PQ + A+ ++N W ++ +L +YGEE + IV R
Sbjct: 112 ERGFSYMQDAELDMRMNPQNPVSAKVLVNEWKPEQLSEILWKYGEEKWSKRIVEFIVNTR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+G + +TGELVD+I+ P G R+ A R FQALRIAVNDEL LE +L
Sbjct: 172 EQGSIETTGELVDIIKKAIPA--GARREGPHPAKRTFQALRIAVNDELGVLERTLDQVLP 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
CLAPGGR+GVI+FHSLEDRIVK+ S + R I Q
Sbjct: 230 CLAPGGRVGVITFHSLEDRIVKEKMNSWLG----------------RCSCPPSFPICQCH 273
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+++ ++PI PS++E N R RSAKLR+ +K+
Sbjct: 274 AKPLARLINRKPILPSSQEIEANPRARSAKLRIAEKL 310
>gi|332799086|ref|YP_004460585.1| Ribosomal RNA small subunit methyltransferase H [Tepidanaerobacter
acetatoxydans Re1]
gi|438002197|ref|YP_007271940.1| rRNA small subunit methyltransferase H [Tepidanaerobacter
acetatoxydans Re1]
gi|332696821|gb|AEE91278.1| Ribosomal RNA small subunit methyltransferase H [Tepidanaerobacter
acetatoxydans Re1]
gi|432178991|emb|CCP25964.1| rRNA small subunit methyltransferase H [Tepidanaerobacter
acetatoxydans Re1]
Length = 320
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 127/337 (37%), Positives = 183/337 (54%), Gaps = 30/337 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+P++L + +++ + +VD TLG GH +++ IG+D D A++ A+
Sbjct: 5 HVPILLHKTIEMLDP-KPGGVYVDATLGGGGHFRELLKKAEYEGTFIGIDQDEVAISTAK 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
+ + + H NF ++K + I EN L S +D IL DLG+SS Q +
Sbjct: 64 ENFSKFSYDIRLIH-------DNFYNLKKI---IKENKL-SEIDGILFDLGVSSYQFDEG 112
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
RGFS D PLDMRMD + +L A+D++N E+ +++ EYGEES + + I +AR
Sbjct: 113 SRGFSYNKDAPLDMRMDQRKTLSAKDVVNKMSRDELKQIISEYGEESWAGRIADFICEAR 172
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
R + +TGELV++I++ P R RR+G A + FQALRI VN+EL+ L+SS+ +
Sbjct: 173 SRKEITTTGELVEIIKNAIPA-RARRKGG-HPARKTFQALRIYVNEELEILDSSIKDAVE 230
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L PGGR+ VI+FHSLEDRIVK F +L E I
Sbjct: 231 LLKPGGRICVITFHSLEDRIVKNAF----------------KLLATACICPKEALICTCN 274
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
K+LT +PI PS EE N R RSAKLRV QK+
Sbjct: 275 HTKVLKVLTSKPIYPSQEEIESNPRARSAKLRVAQKL 311
>gi|433545451|ref|ZP_20501805.1| 16S rRNA m(4)C1402 methyltransferase [Brevibacillus agri BAB-2500]
gi|432183274|gb|ELK40821.1| 16S rRNA m(4)C1402 methyltransferase [Brevibacillus agri BAB-2500]
Length = 306
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 127/328 (38%), Positives = 176/328 (53%), Gaps = 32/328 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+ E +D + R +VDCTLG AGHSS I E I +D D A AR
Sbjct: 5 HVTVLRDEAVDGLNI-RPGGIYVDCTLGGAGHSSLIASRLTEGGRLIAIDQDDWAHDNAR 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L P++ T K NFRH+K ++ +++ +GVD +L DLG+SS Q++
Sbjct: 64 ERLA--------PYMDKVTLVKSNFRHLKEIV----KDLGLTGVDGVLFDLGVSSPQLDE 111
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS D PLDMRMD QA L A DI+N W + E+ +++ YGEE + +IVQ
Sbjct: 112 GERGFSYNADAPLDMRMDQQAPLSAYDIVNEWDEEEIAKIIWLYGEEKFSRRIARQIVQQ 171
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + + +TGELV+LI+ P R G A R FQA+RIAVNDEL + ++
Sbjct: 172 RKKQPIRTTGELVELIKEGIPAAARRTGG--HPAKRTFQAIRIAVNDELDAFKEAVADAI 229
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
D L PGGR+ VI+FHSLEDRI KQ + D+++ + ++ I
Sbjct: 230 DILNPGGRVSVITFHSLEDRICKQVYQ---DYSKGCTCPPSFPICTCGNEAIV------- 279
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCR 442
K++T++PI PS EE N R R
Sbjct: 280 ------KVITRKPILPSEEELAANPRAR 301
>gi|15604423|ref|NP_220941.1| S-adenosyl-methyltransferase MraW [Rickettsia prowazekii str.
Madrid E]
gi|8134811|sp|Q9ZCY2.1|RSMH_RICPR RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|3861117|emb|CAA15017.1| unknown [Rickettsia prowazekii str. Madrid E]
Length = 306
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 128/338 (37%), Positives = 189/338 (55%), Gaps = 38/338 (11%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRA-HPELKLHIGVDVDPSALAKA 174
HIPVML EVL V + + S++DCT GA G+S+AI+ + + + +D DP+ +
Sbjct: 5 HIPVMLSEVLAVLAP-KGYESYLDCTFGAGGYSNAILNSCYCSV---TSLDRDPNVIESV 60
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+G+ +KT+ FA +FR +K D I+MDLG+SSMQ++
Sbjct: 61 EKIKQD--YGERFNFIKTN-FADSFRKLK-----------HKKFDGIVMDLGVSSMQLDI 106
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
+RGFS L DGPLDMRM Q AE+ +N+ + E+ V+ +YG ES + IV+
Sbjct: 107 ADRGFSFLYDGPLDMRMSVQG-FSAEEFVNTADEEEIADVIYKYGNESLSRRIAKSIVEY 165
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + ST +L ++++ G R+G I +AT+ FQA+RI +N+EL+ LE L
Sbjct: 166 RKTARIDSTRKLAEIVRYSI----GFRKGKIDSATKTFQAIRIYINNELEELEQFLANVK 221
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
+ L GRL V+SFHSLEDRIVK F +E++E + +D+ I+
Sbjct: 222 NILKKDGRLVVVSFHSLEDRIVKNFF-------KENSEKQVARSKYAKDE------IKID 268
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
W KI+T + +TPS++E RLN R RSAKLR +KI
Sbjct: 269 PNKW-LKIITPKVLTPSSQEIRLNVRARSAKLRAAKKI 305
>gi|424827298|ref|ZP_18252107.1| 16S rRNA m(4)C1402 methyltransferase [Clostridium sporogenes PA
3679]
gi|365980221|gb|EHN16257.1| 16S rRNA m(4)C1402 methyltransferase [Clostridium sporogenes PA
3679]
Length = 309
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 124/339 (36%), Positives = 178/339 (52%), Gaps = 36/339 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+L E +D + +VDCTLG GHS I++ IG+D D SAL A+
Sbjct: 5 HISVLLEETIDSLNIKED-GIYVDCTLGGGGHSKEILKRLSHKGKLIGIDQDTSALKAAK 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L + H NF +I S+L ++D + VD I+MDLG+SS Q++
Sbjct: 64 ERLKDY-ENVIYVH-------NNFYNIDSILEELDID----KVDGIVMDLGVSSYQLDEA 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
RGFS + D PLDMRM+ + A D++NS+ + E+ ++L+ YGEE + IV+ R
Sbjct: 112 SRGFSYMKDAPLDMRMNRDENFSAYDVINSYGEEELFKILKNYGEEKFSRKIARFIVEKR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +TGELV++I+ P + +R+G A R FQA+RI VN EL+ L ++ +
Sbjct: 172 TEKSIETTGELVEIIRKAIPA-KFQREGH--PAKRTFQAIRIEVNKELQILNKAIEDSVN 228
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L GRL +I+FHSLEDRIVK F + + +
Sbjct: 229 RLNKDGRLSIITFHSLEDRIVKVKF------------------KELEKPCTCPPSFPICV 270
Query: 416 QGWNG--KILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
G KI+TK+P+ PS EE+ N R RSAKLRV +KI
Sbjct: 271 CGKKPQIKIVTKKPMEPSKEEKEFNSRSRSAKLRVCRKI 309
>gi|269838022|ref|YP_003320250.1| S-adenosyl-methyltransferase MraW [Sphaerobacter thermophilus DSM
20745]
gi|269787285|gb|ACZ39428.1| S-adenosyl-methyltransferase MraW [Sphaerobacter thermophilus DSM
20745]
Length = 326
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 129/343 (37%), Positives = 174/343 (50%), Gaps = 35/343 (10%)
Query: 112 QQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
+ S H PVML E L++ R ++D T G GH+ AI+ A + +D DP+A+
Sbjct: 16 RPSGHQPVMLAESLNLLQV-RPGGRYIDATFGGGGHTRAILEASSPDGRVLALDADPAAV 74
Query: 172 AKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQ 231
A+A A P L NF I ++ VD +LMDLG SS Q
Sbjct: 75 ARAEALAEE-----VGPRLTVRH--GNFAQI----ARLARAAGFDAVDGVLMDLGFSSFQ 123
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ P RGFS GPLDMR DP A +I+N+W +A++ R++ EYGEE + I
Sbjct: 124 IDEPSRGFSFQRPGPLDMRFDPTTGSSAREIVNTWDEADLSRIIFEYGEEPKARRIARAI 183
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
V AR + +T L +++ G RGR I ATR FQALRIAVN EL+ LE L
Sbjct: 184 VAARRERPIETTDHLAAIVEQAVGGRRGR---AIHPATRTFQALRIAVNRELEVLEQGLA 240
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
D LAPGGRL VI+FHSLEDRIVKQ F R D I
Sbjct: 241 GALDVLAPGGRLVVIAFHSLEDRIVKQYF------------------RTEARDCICPPET 282
Query: 412 RQIIQGWNG--KILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ G +++T +P+ P+ E+ LN R RSA+LR +++
Sbjct: 283 PVCVCGHRARLRVVTPKPLRPTEAEQALNPRSRSARLRAAERL 325
>gi|392531395|ref|ZP_10278532.1| S-adenosyl-methyltransferase MraW [Carnobacterium maltaromaticum
ATCC 35586]
gi|414083286|ref|YP_006991994.1| S-adenosyl-methyltransferase MraW [Carnobacterium maltaromaticum
LMA28]
gi|412996870|emb|CCO10679.1| S-adenosyl-methyltransferase MraW [Carnobacterium maltaromaticum
LMA28]
Length = 317
Score = 194 bits (493), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 133/337 (39%), Positives = 176/337 (52%), Gaps = 28/337 (8%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
+H V+L E +D + + +VDCTLG AGHS ++ E D D AL A
Sbjct: 5 NHETVLLHETVDGLAL-KPDGVYVDCTLGGAGHSEYLLSQLSEEGHLYAFDQDERALENA 63
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+ L + +K+ NFR IK L QI I VD IL DLG+SS Q++
Sbjct: 64 KIRLAPFVEKGMVTFIKS-----NFRFIKEELNQI--GIFE--VDGILYDLGVSSPQLDE 114
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS D PLDMRMD QA L A++I+N+W E+ R+ YGEE + KI A
Sbjct: 115 AERGFSYHQDAPLDMRMDTQAPLTAKEIVNTWSYHELIRIFYRYGEEKFSKQIARKIEAA 174
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +TGELV+LI+ P R+ G A RVFQA+RIAVNDEL +E SL A
Sbjct: 175 REVAPIETTGELVELIKEGIPAPARRKGG--HPAKRVFQAIRIAVNDELSAVEDSLEAAI 232
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
+ GGR+ VI+FHSLEDRIVK F +E + + +
Sbjct: 233 SLIKVGGRVSVITFHSLEDRIVKSIF---------------KEHSALPELPPGLPVMPTE 277
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
Q K++ ++PI P+ EE N R RSAKLR+ +K
Sbjct: 278 FQP-ELKLVNRKPIIPTEEELEQNNRARSAKLRIAEK 313
>gi|148379426|ref|YP_001253967.1| S-adenosyl-methyltransferase MraW [Clostridium botulinum A str.
ATCC 3502]
gi|153932097|ref|YP_001383805.1| S-adenosyl-methyltransferase MraW [Clostridium botulinum A str.
ATCC 19397]
gi|153935599|ref|YP_001387355.1| S-adenosyl-methyltransferase MraW [Clostridium botulinum A str.
Hall]
gi|263446050|sp|A7FTX8.1|RSMH_CLOB1 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|263446073|sp|A5I1T3.1|RSMH_CLOBH RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|148288910|emb|CAL82997.1| S-adenosyl-methyltransferase [Clostridium botulinum A str. ATCC
3502]
gi|152928141|gb|ABS33641.1| S-adenosyl-methyltransferase MraW [Clostridium botulinum A str.
ATCC 19397]
gi|152931513|gb|ABS37012.1| S-adenosyl-methyltransferase MraW [Clostridium botulinum A str.
Hall]
Length = 309
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 123/339 (36%), Positives = 180/339 (53%), Gaps = 36/339 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+L E +D + +VDCTLG GHS I++ IG+D D SA+ A+
Sbjct: 5 HISVLLEETIDSLNIKED-GVYVDCTLGGGGHSKEILKKLSHKGKLIGIDQDTSAIKAAK 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L + H NF +I S+L ++D + VD I+MDLG+SS Q++
Sbjct: 64 ERLKDY-ENVIYVH-------NNFYNIDSILEELDID----KVDGIIMDLGVSSYQLDEA 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
RGFS + D PLDMRM+ + +L A ++N++ + E+ ++L+ YGEE + IV+ R
Sbjct: 112 SRGFSYMKDAPLDMRMNREENLSAYGVINNYEEEELFKILKNYGEEKFSRKIARFIVEKR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +TGELV++I+ P + +R+G A R FQA+RI VN EL+ L ++ +
Sbjct: 172 TENPIETTGELVEIIRKAIPA-KFQREGH--PAKRTFQAIRIEVNKELQILNKAIEDSVN 228
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L GRL +I+FHSLEDRIVK F + + +
Sbjct: 229 RLNKDGRLSIITFHSLEDRIVKVKF------------------KELEKPCTCPPSFPICV 270
Query: 416 QGWNG--KILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
G KI+TK+PI PS EE+ +N R RSAKLRV +KI
Sbjct: 271 CGKEPQIKIITKKPIEPSKEEKEINSRSRSAKLRVCRKI 309
>gi|392940676|ref|ZP_10306320.1| S-adenosyl-methyltransferase MraW [Thermoanaerobacter siderophilus
SR4]
gi|392292426|gb|EIW00870.1| S-adenosyl-methyltransferase MraW [Thermoanaerobacter siderophilus
SR4]
Length = 308
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 125/345 (36%), Positives = 184/345 (53%), Gaps = 43/345 (12%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
+ SH V+L E ++ + + + +VD TLG GHS I++ KL I +D D A+
Sbjct: 2 EYSHKSVLLKETIE-YLNIKPEGIYVDGTLGGGGHSEEILKRLTTGKL-IAIDRDLDAIK 59
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
++ L + + NF++IK +L +D + VD IL+DLG+SS Q+
Sbjct: 60 ASKERLKN--------YKNVEYINDNFKNIKEILKSLDID----KVDGILLDLGVSSYQL 107
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
ERGFS + D PLDMRMD + A D++N + E+ RV+REYGEE + I
Sbjct: 108 EEVERGFSYMKDAPLDMRMDKNSPFSAYDVVNKYSQQELERVIREYGEEKWASRIAKFIA 167
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
+ R +G + +T +LV++I++ P RR+G A R FQA+RI VN+ELK L+ ++
Sbjct: 168 KEREKGEIKTTFQLVEIIKNAVPA-SARREGP-HPAKRTFQAIRIEVNEELKGLDKAIED 225
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIID-----HNREDAEGNEEELRNIRDDNIN 407
+ L GR+ +I+FHSLEDRIVK TF + + HN G E +
Sbjct: 226 MVEVLRGKGRIAIITFHSLEDRIVKNTFKKLENPCTCPHNIPCTCGKEPLI--------- 276
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
KI+TK+P+ PS EE N R RSAKLRV +K+
Sbjct: 277 -------------KIITKKPVLPSKEEIETNSRSRSAKLRVAEKL 308
>gi|402815846|ref|ZP_10865438.1| ribosomal RNA small subunit methyltransferase H [Paenibacillus
alvei DSM 29]
gi|402506886|gb|EJW17409.1| ribosomal RNA small subunit methyltransferase H [Paenibacillus
alvei DSM 29]
Length = 317
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 132/324 (40%), Positives = 170/324 (52%), Gaps = 39/324 (12%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
+VDCTLG AGHS I I +D D AL A+ L P++ T
Sbjct: 24 YVDCTLGGAGHSERIASQLSTAGRLIALDQDDWALDNAKVRLA--------PYMDRVTLV 75
Query: 197 K-NFRHIKSVL-----GQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMR 250
K NFRH++ L Q+D N VD IL DLG+SS Q++ ERGFS D PLDMR
Sbjct: 76 KTNFRHLEEALIQAGVPQVDGN---PQVDGILFDLGVSSPQLDEGERGFSYNHDAPLDMR 132
Query: 251 MDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLI 310
MD L A DI+NSW +AE+ ++L +YGEE + +I AR + + +TGEL +L+
Sbjct: 133 MDQNGELTAYDIVNSWSEAEIAKILFQYGEEKFSRRIAKEIGAARAKQPIQTTGELAELV 192
Query: 311 QSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHS 370
++ P RR G A R FQALRIAVNDEL E +LH CL P GR+ VI+FHS
Sbjct: 193 KAGIPAA-ARRTGG-HPAKRSFQALRIAVNDELGAFEDALHQAVRCLKPEGRVAVITFHS 250
Query: 371 LEDRIVKQTFLSIIDHNREDAEGNEEELRNI--RDDNINETWIRQIIQGWNGKILTKRPI 428
LEDRI KQ NE R D + + ++ ++ ++PI
Sbjct: 251 LEDRICKQIM-------------NEYVGRCTCPPDLPMCACGHKSVL-----SLVNRKPI 292
Query: 429 TPSAEEERLNCRCRSAKLRVIQKI 452
PS E N R RSAKLRV QK+
Sbjct: 293 APSDNELVDNPRSRSAKLRVAQKL 316
>gi|291300155|ref|YP_003511433.1| S-adenosyl-methyltransferase MraW [Stackebrandtia nassauensis DSM
44728]
gi|290569375|gb|ADD42340.1| S-adenosyl-methyltransferase MraW [Stackebrandtia nassauensis DSM
44728]
Length = 336
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 132/348 (37%), Positives = 173/348 (49%), Gaps = 49/348 (14%)
Query: 115 SHIPVMLGEVLDVFSSS--RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
+H+PV V + + + R VD TLGA GHS A++ AHP L + IG+D DP AL
Sbjct: 11 AHVPVFAERVCQLLAPAFDRPDPVCVDATLGAGGHSLALLEAHPSLTV-IGIDRDPDALE 69
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVD---AILMDLGMSS 229
A L F FR ++V ++DE + +GVD IL DLG+SS
Sbjct: 70 LAGKRLAR--------------FGDRFRPARAVYDELDEVLDETGVDQISGILFDLGVSS 115
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
MQ++ ERGF+ D PLDMRMD + A +++NS+ + ++ R+LR YGEE +
Sbjct: 116 MQLDVAERGFAYAQDAPLDMRMDQSQGMTAAEVVNSYAERDLSRILRIYGEERFAPRIAK 175
Query: 290 KIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESS 349
IV R R + S+ EL DL++ P RR G + R FQALRI VN EL L +
Sbjct: 176 SIVAQRKRAPIESSRELADLVRDAVPAATRRRGG--NPSKRTFQALRIEVNRELDVLRDA 233
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNRE-----DAEGNEEELRNIRDD 404
L D LAP GR+ V+S+HSLEDRIVK+ + D G E LR
Sbjct: 234 LPRAIDALAPDGRIVVLSYHSLEDRIVKRELGERTKSSAPAGLPIDVPGTEPTLR----- 288
Query: 405 NINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
W LTK PS E N R SAKLR QK+
Sbjct: 289 -----W------------LTKGAQPPSEAEIAANPRAASAKLRAAQKL 319
>gi|381183159|ref|ZP_09891918.1| 16S rRNA m(4)C1402 methyltransferase [Listeriaceae bacterium TTU
M1-001]
gi|380316944|gb|EIA20304.1| 16S rRNA m(4)C1402 methyltransferase [Listeriaceae bacterium TTU
M1-001]
Length = 310
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 133/347 (38%), Positives = 184/347 (53%), Gaps = 52/347 (14%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D+ + + +VDCTLG AGHS+ ++ E I D D +A+ A+
Sbjct: 4 HETVLLHETVDMLNIKKD-GIYVDCTLGGAGHSAYLLSQLGEKGRLIAFDQDITAIDNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L + TF K NFR IK+ L ++ I + VD IL DLG+SS Q++
Sbjct: 63 EKLQD----------ERVTFIKSNFRWIKTAL--LENGITK--VDGILYDLGVSSPQLDV 108
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS D PLDMRMD L A+ ++N WP ++ R+ YGEE + +I +
Sbjct: 109 RERGFSYHQDAPLDMRMDQSQELTAQIVVNEWPYEDLIRIFFRYGEEKFSKQIAREIERK 168
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +T ELVD+I+ V P R+ G R+FQA+RIAVNDEL +E SL+
Sbjct: 169 RQVKKIETTQELVDIIKDVIPAPARRKGG--HPGKRIFQAIRIAVNDELGAVEDSLNDAL 226
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
L GGR+ VI+FHSLEDRI K F +E A+G E I
Sbjct: 227 TLLNTGGRISVITFHSLEDRITKHIF-------QEAAKGPE------------------I 261
Query: 415 IQGW---------NGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+G + K+++++PI PS EE +N R RSAKLRVI+KI
Sbjct: 262 PKGLPVIPKEYEPDFKLVSRKPILPSEEEVEMNNRARSAKLRVIEKI 308
>gi|402574221|ref|YP_006623564.1| S-adenosyl-methyltransferase MraW [Desulfosporosinus meridiei DSM
13257]
gi|402255418|gb|AFQ45693.1| S-adenosyl-methyltransferase MraW [Desulfosporosinus meridiei DSM
13257]
Length = 310
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 129/337 (38%), Positives = 175/337 (51%), Gaps = 31/337 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E ++ F S +VDCTLG AGHS I+ E I D D A+ A
Sbjct: 5 HVTVLLEETVN-FVVSNPSGRYVDCTLGGAGHSKKILSKLGESGKLICFDQDIQAIRHAE 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L + +NF ++ LG++D VD I+ DLG+SS Q++
Sbjct: 64 DILGK--------DERVTLINRNFESLEETLGELD----LLPVDGIIFDLGVSSPQLDEA 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS + D PLDMRMD L A +I+N W + ++ +++ +YGEE + I QAR
Sbjct: 112 ERGFSYMQDAPLDMRMDSSGQLSAREIVNLWTEEDLAQLIWDYGEEKWAKRIAQFITQAR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
L +TG+LV I++ P RR G A R FQA+RI VNDEL L+ +L +
Sbjct: 172 REKPLETTGDLVQAIKAAVPAAV-RRSG-PHPAKRTFQAIRIVVNDELGVLDRALDQALN 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
CL GGR+GVI+FHSLEDRIVK+ S + R E I +
Sbjct: 230 CLGQGGRVGVITFHSLEDRIVKERMKSWLG----------------RCTCPPELPICRCN 273
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
K++TK+P+ PS EE N R RSAKLRV +KI
Sbjct: 274 AKAKAKVITKKPLLPSQEEVEQNPRSRSAKLRVAEKI 310
>gi|168182383|ref|ZP_02617047.1| S-adenosyl-methyltransferase MraW [Clostridium botulinum Bf]
gi|237794792|ref|YP_002862344.1| S-adenosyl-methyltransferase MraW [Clostridium botulinum Ba4 str.
657]
gi|263446362|sp|C3KV90.1|RSMH_CLOB6 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|182674378|gb|EDT86339.1| S-adenosyl-methyltransferase MraW [Clostridium botulinum Bf]
gi|229262949|gb|ACQ53982.1| S-adenosyl-methyltransferase MraW [Clostridium botulinum Ba4 str.
657]
Length = 309
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 123/339 (36%), Positives = 180/339 (53%), Gaps = 36/339 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+L E +D + +VDCTLG GHS I++ IG+D D SA+ A+
Sbjct: 5 HISVLLEETIDSLNIKED-GVYVDCTLGGGGHSKEILKKLSHKGKLIGIDQDTSAIKAAK 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L + H NF +I S+L ++D + VD I+MDLG+SS Q++
Sbjct: 64 ERLKDY-ENVIYVH-------NNFYNIDSILEELDID----KVDGIIMDLGVSSYQLDEA 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
RGFS + D PLDMRM+ + +L A ++N++ + E+ ++L+ YGEE + IV+ R
Sbjct: 112 SRGFSYMKDAPLDMRMNREENLSAYGVINNYKEEELFKILKNYGEEKFSRKIARFIVEKR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +TGELV++I+ P + +R+G A R FQA+RI VN EL+ L ++ +
Sbjct: 172 TENPIETTGELVEIIRKAIPA-KFQREGH--PAKRTFQAIRIEVNKELQILNKAIEDSVN 228
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L GRL +I+FHSLEDRIVK F + + +
Sbjct: 229 RLNKDGRLSIITFHSLEDRIVKVKF------------------KELEKPCTCPPSFPICV 270
Query: 416 QGWNG--KILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
G KI+TK+PI PS EE+ +N R RSAKLRV +KI
Sbjct: 271 CGKEPQIKIITKKPIEPSKEEKEINSRSRSAKLRVCRKI 309
>gi|168180112|ref|ZP_02614776.1| S-adenosyl-methyltransferase MraW [Clostridium botulinum NCTC 2916]
gi|182668973|gb|EDT80949.1| S-adenosyl-methyltransferase MraW [Clostridium botulinum NCTC 2916]
Length = 309
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 122/339 (35%), Positives = 180/339 (53%), Gaps = 36/339 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+L E +D + +VDCTLG GHS I++ IG+D D SA+ A+
Sbjct: 5 HISVLLEETIDSLNIKED-GVYVDCTLGGGGHSKEILKKLSHKGKLIGIDQDTSAIKAAK 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L + H NF +I S+L ++D + VD I+MDLG+SS Q++
Sbjct: 64 ERLKDY-ENVIYVH-------NNFYNIDSILEELDID----KVDGIIMDLGVSSYQLDEA 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
RGFS + D PLDMRM+ + + A +++N++ + E+ ++L+ YGEE + IV+ R
Sbjct: 112 SRGFSYMKDAPLDMRMNREENFSAYNVVNNYEEEELFKILKNYGEEKFSRKIARFIVEKR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +TGELV++I+ P + +R+G A R FQA+RI VN EL+ L ++ +
Sbjct: 172 TENPIETTGELVEIIRKAIPA-KFQREGH--PAKRTFQAIRIEVNKELQILNKAIEDSVN 228
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L GRL +I+FHSLEDRIVK F + + +
Sbjct: 229 RLNKDGRLSIITFHSLEDRIVKVKF------------------KELEKPCTCPPSFPICV 270
Query: 416 QGWNG--KILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
G KI+TK+PI PS EE+ +N R RSAKLRV +KI
Sbjct: 271 CGKEPQIKIITKKPIEPSKEEKEINSRSRSAKLRVCRKI 309
>gi|187934997|ref|YP_001886637.1| S-adenosyl-methyltransferase MraW [Clostridium botulinum B str.
Eklund 17B]
gi|263446060|sp|B2TS30.1|RSMH_CLOBB RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|187723150|gb|ACD24371.1| S-adenosyl-methyltransferase MraW [Clostridium botulinum B str.
Eklund 17B]
Length = 310
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 129/345 (37%), Positives = 180/345 (52%), Gaps = 41/345 (11%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
+ HI V+L E LD +VDCTLG AGHSS I+ L IG+D D AL
Sbjct: 2 EFKHISVLLNECLDALDIKDN-GIYVDCTLGGAGHSSHILERLSNEGLLIGIDQDRDALK 60
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
A+ L + + H+ NF I ++L +D VD ILMDLG+SS Q+
Sbjct: 61 AAKERLKRFENVKY-----VHS---NFYDIDNILQNLD----IPKVDGILMDLGVSSYQL 108
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ RGFS + D PLDMRM+ A +I+N + + E+ +++R YGEE + N IV
Sbjct: 109 DEGARGFSYMKDAPLDMRMNRDNDFSAYEIVNEYSEDELYKIIRNYGEERFAKRISNCIV 168
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
R + +T ELVD+I++ P + RR+G A R FQA+RI VN ELK L ++
Sbjct: 169 NRRSDKPIETTMELVDIIKAAIPA-KARREGP-HPAKRTFQAIRIEVNSELKILNQTIED 226
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
+ L PGGR+ +I+FHSLEDRIVK F R+ N T R
Sbjct: 227 GVNRLKPGGRMAIITFHSLEDRIVKLKF---------------------RELNDPCTCPR 265
Query: 413 QIIQGWNGK-----ILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ GK +++++ I P+ EE N R RSAKLR+I+K+
Sbjct: 266 EFPMCICGKKPSVRLISRKGIEPTKEEVEENPRSRSAKLRIIEKL 310
>gi|170755383|ref|YP_001781092.1| S-adenosyl-methyltransferase MraW [Clostridium botulinum B1 str.
Okra]
gi|429247501|ref|ZP_19210744.1| 16S rRNA m(4)C1402 methyltransferase [Clostridium botulinum
CFSAN001628]
gi|263446089|sp|B1IKR0.1|RSMH_CLOBK RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|169120595|gb|ACA44431.1| S-adenosyl-methyltransferase MraW [Clostridium botulinum B1 str.
Okra]
gi|428755455|gb|EKX78083.1| 16S rRNA m(4)C1402 methyltransferase [Clostridium botulinum
CFSAN001628]
Length = 309
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 123/339 (36%), Positives = 180/339 (53%), Gaps = 36/339 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+L E +D + +VDCTLG GHS I++ IG+D D SA+ A+
Sbjct: 5 HISVLLEETIDSLNIKED-GVYVDCTLGGGGHSKEILKKLSHKGKLIGIDQDTSAIKAAK 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L + H NF +I S+L ++D + VD I+MDLG+SS Q++
Sbjct: 64 EKLKDY-ENIIYVH-------NNFYNIDSILEELDID----KVDGIIMDLGVSSYQLDEA 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
RGFS + D PLDMRM+ + +L A ++N++ + E+ ++L+ YGEE + IV+ R
Sbjct: 112 SRGFSYMKDAPLDMRMNREENLSAYGVINNYEEEELFKILKNYGEEKFSRKIARFIVEKR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +TGELV++I+ P + +R+G A R FQA+RI VN EL+ L ++ +
Sbjct: 172 TENPIETTGELVEIIRKAIPA-KFQREGH--PAKRTFQAIRIEVNKELQILNKAIEDSVN 228
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L GRL +I+FHSLEDRIVK F + + +
Sbjct: 229 RLNKDGRLSIITFHSLEDRIVKVKF------------------KELEKPCTCPPSFPICV 270
Query: 416 QGWNG--KILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
G KI+TK+PI PS EE+ +N R RSAKLRV +KI
Sbjct: 271 CGKEPQIKIITKKPIEPSKEEKEINSRSRSAKLRVCRKI 309
>gi|427412449|ref|ZP_18902641.1| S-adenosyl-methyltransferase MraW [Veillonella ratti
ACS-216-V-Col6b]
gi|425716256|gb|EKU79240.1| S-adenosyl-methyltransferase MraW [Veillonella ratti
ACS-216-V-Col6b]
Length = 310
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 133/342 (38%), Positives = 180/342 (52%), Gaps = 41/342 (11%)
Query: 116 HIPVMLGEVLD-VFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
H+ V+L E ++ V ++ I +VDCTLG AGH+ A+ L IG+D D ALA A
Sbjct: 5 HVSVLLKETVNAVLTNPHGI--YVDCTLGGAGHAHALGEQLAADGLLIGLDQDEVALATA 62
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQ--IDENILRSGVDAILMDLGMSSMQV 232
L L + + T NF+ +K+ L I E VD + DLG+SS Q+
Sbjct: 63 TERLADL-------NCRVMTIPTNFKDLKAALTSRGITE------VDGFIFDLGVSSYQL 109
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ ERGFS + DGPLDMRMD Q SL A D++N + +A++ R++++YGEE + IV
Sbjct: 110 DTAERGFSYMQDGPLDMRMDMQGSLTAADVVNGYSEADLVRIIQDYGEERWAKRIAQFIV 169
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
AR + +TGEL +I+ P G R+ A R FQA+RI VN EL L+ S
Sbjct: 170 TAREDKPITTTGELTKIIKQAIPA--GARREGPHPAKRTFQAIRIEVNQELAILKDSFKD 227
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEG--NEEELRNIRDDNINETW 410
D L PGGR+GVI+FHSLEDRI KQTF +E + G EL ++
Sbjct: 228 AVDLLKPGGRIGVITFHSLEDRITKQTF-------KELSTGCICPPELPVCVCHHVAVVK 280
Query: 411 IRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
R + I P EE N R RSAKLRV +K+
Sbjct: 281 ARN------------KAIEPGNEEVTANPRARSAKLRVAEKV 310
>gi|323489493|ref|ZP_08094720.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Planococcus donghaensis MPA1U2]
gi|323396624|gb|EGA89443.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Planococcus donghaensis MPA1U2]
Length = 312
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 131/338 (38%), Positives = 178/338 (52%), Gaps = 30/338 (8%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
+H V+L E +D + R +VDCTLG AGHS +++ + D D +A+A A
Sbjct: 3 NHTTVLLHETVDGLNV-RPDGIYVDCTLGGAGHSEYLVQQLSDQGHLYCFDQDATAIAHA 61
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+ L LH H NF+ +K L E VD IL DLG+SS Q++
Sbjct: 62 KEKLQEYLHRITFIH-------ANFKFLKEEL----EMHGVEKVDGILYDLGVSSPQLDT 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
PERGFS D PLDMRMD A L A ++N W ++ R+ YGEE + KI A
Sbjct: 111 PERGFSYHNDAPLDMRMDQSAELSAYHVVNEWSFEDLVRIFYRYGEEKFSKQIARKIEAA 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + + +TG+LV+ I+ P R+ G A RVFQA+RIAVNDEL E+SL
Sbjct: 171 REKQPIETTGQLVECIKDGIPAFARRKGG--HPAKRVFQAIRIAVNDELGAAETSLQDAV 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
LA GGR+ VI+FHSLEDR+ K F ++A E N+ + + I
Sbjct: 229 SLLAIGGRISVITFHSLEDRLCKAIF--------KEASSLPELPPNL---PVIPDGMEPI 277
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ K++T++PI PS EE N R RSAKLR+ +KI
Sbjct: 278 L-----KLITRKPILPSEEELEHNNRSRSAKLRIAEKI 310
>gi|320450513|ref|YP_004202609.1| S-adenosyl-methyltransferase MraW [Thermus scotoductus SA-01]
gi|320150682|gb|ADW22060.1| S-adenosyl-methyltransferase MraW [Thermus scotoductus SA-01]
Length = 286
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 129/338 (38%), Positives = 181/338 (53%), Gaps = 59/338 (17%)
Query: 114 SSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAK 173
+ HIPV+ EVL++ R +VD TLG AGH+ I+ L IG+D DP A+A+
Sbjct: 5 TEHIPVLYEEVLNLLQV-RPGQVYVDATLGGAGHTKGILERG---GLVIGLDQDPEAVAR 60
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
ARA P L+ F +NFRH+K VL + S V IL DLG+SS +
Sbjct: 61 ARA--------LGLPGLRV--FQQNFRHLKEVLQEAGV----SQVAGILADLGVSSFHLE 106
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
+P+RGFS +GPLDMRM + A +++N+ P ++ R+LR+ GEE H + IV+
Sbjct: 107 DPKRGFSYQREGPLDMRMGEEGP-TAYEVVNTLPLEDLRRILRDLGEEKQAHRIAKAIVE 165
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
R + + +T EL ++++ G R+ A + FQA+R+ VNDEL LE L
Sbjct: 166 RRRKAPIRTTLELAEVVRQAV----GFRKAG-HPARKTFQAIRMYVNDELGALEEFLRQA 220
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
+ LAPGGRL VI+FHSLEDR+VK R +++ ++
Sbjct: 221 EEVLAPGGRLLVITFHSLEDRVVK---------------------RFLKESSL------- 252
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K+LTK+PITPS EE N R RSAKLR +K
Sbjct: 253 -------KVLTKKPITPSPEEVAKNPRSRSAKLRAAEK 283
>gi|311029920|ref|ZP_07708010.1| S-adenosyl-methyltransferase MraW [Bacillus sp. m3-13]
Length = 312
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 133/349 (38%), Positives = 181/349 (51%), Gaps = 56/349 (16%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E ++ + T +VDCTLG AGHSS I++ + I D D AL A+
Sbjct: 4 HVTVLLNEAVEGLNIKEDGT-YVDCTLGGAGHSSEIVKQLSDKGRLIAFDQDDHALEHAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L H +L F K NF+H+K L ++ I + VD +L DLG+SS Q++
Sbjct: 63 NVL--------HNYLDRVIFIKSNFKHLKEKL--YEQGITK--VDGVLFDLGVSSPQLDT 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
PERGFS + PLDMRMD + L A D++N W ++ R+ +YGEE + KI +
Sbjct: 111 PERGFSYHHEAPLDMRMDMNSPLSAYDVVNEWSYEKLVRIFFQYGEEKFSKQIARKIEEY 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +T ELV++I+ P RR G A RVFQA+RIAVNDEL E ++H
Sbjct: 171 RKSKPIETTLELVEIIKDGIPA-PARRTGG-HPAKRVFQAIRIAVNDELGVFEDAIHQAI 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTF------------LSIIDHNREDAEGNEEELRNIR 402
D L GGR+ VI+FHSLEDR+ K F L II EE + I
Sbjct: 229 DVLKVGGRVSVITFHSLEDRMCKVAFKEKSQLPQLPPGLPII----------PEEFQPIL 278
Query: 403 DDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PI PS EE N R RSAKLR+ +K
Sbjct: 279 ------------------KLITRKPILPSEEELETNNRARSAKLRIAEK 309
>gi|304317210|ref|YP_003852355.1| S-adenosyl-methyltransferase MraW [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778712|gb|ADL69271.1| S-adenosyl-methyltransferase MraW [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 310
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 126/342 (36%), Positives = 193/342 (56%), Gaps = 37/342 (10%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
+ H V+L E ++ + + +VD TLG GHS I+R P +L I +D D AL
Sbjct: 2 EFKHESVLLNETIE-YLKVKPDGVYVDGTLGGGGHSYEILRRLPRGRL-IAIDRDMDALY 59
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
A L + + H N+++IK++L ID I R +D ++DLG+SS Q+
Sbjct: 60 AASVRLKDF-NNVTYVH-------DNYKNIKNILKNID--IER--IDGAILDLGVSSYQL 107
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ +RGFS + D PLDMRMD ++L AE ++N++ + ++ R+L +YGEE + IV
Sbjct: 108 DEVKRGFSYMHDAPLDMRMDKGSALTAEHVVNNYSEDDIARILFDYGEEKWAKRIAKFIV 167
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
+ R + + +T +LVD+I+ P + RR G A R FQA+RI VNDELK L+S++
Sbjct: 168 EERKKRSIKTTFQLVDIIKKAVPASK-RRTGP-HPAKRTFQAIRIEVNDELKGLDSAIDD 225
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRN--IRDDNINETW 410
D + P GR+ +I+FHSLEDRIVK + ++L N N+ T
Sbjct: 226 FIDVMNPNGRIAIITFHSLEDRIVKNMY---------------KKLENPCTCPKNLPCTC 270
Query: 411 IRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++ + KI+TK+P+TP+ EE + N R RSAKLRV +K+
Sbjct: 271 GKKPVI----KIITKKPVTPNKEELKTNPRSRSAKLRVAEKL 308
>gi|366086122|ref|ZP_09452607.1| 16S rRNA m(4)C1402 methyltranserfase [Lactobacillus zeae KCTC 3804]
Length = 313
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 126/317 (39%), Positives = 175/317 (55%), Gaps = 30/317 (9%)
Query: 136 SFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTF 195
++VD TLG GH+ I++ +L I D D +A+A A G P L
Sbjct: 25 TYVDATLGRGGHTRQILKQLTTGRL-IAFDQDEAAIAAVTASF-----GDLPPQLTL--V 76
Query: 196 AKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQA 255
+NFR + + L +D S VD IL DLG+SS Q ++ +RGFS D PLDMRMD +
Sbjct: 77 HRNFRELTAALADLD----ISDVDGILYDLGVSSPQFDDSKRGFSYRFDAPLDMRMDQRQ 132
Query: 256 SLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTP 315
+L A+ I+N WP AE+ R+ YGEE + +I QAR G + +T +LVDLI++ P
Sbjct: 133 TLDAKTIVNEWPYAELVRIFSRYGEEHFSKQIARRIEQARAEGPITTTFQLVDLIKAGIP 192
Query: 316 GMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRI 375
+ RR G A +VFQA+RIAVNDEL LESSL L GR+ VI+F SLEDR+
Sbjct: 193 A-KARRTGG-HPAKKVFQAIRIAVNDELSALESSLEQALKLLNVNGRISVITFQSLEDRL 250
Query: 376 VKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEE 435
VK F +E+ +++D + Q + +++T++PI PS +E
Sbjct: 251 VKTMF---------------KEVSSVQDVPRGLPVVPASAQP-HYRLVTRKPILPSTDEL 294
Query: 436 RLNCRCRSAKLRVIQKI 452
N R SAKLRVI+KI
Sbjct: 295 AENHRAHSAKLRVIEKI 311
>gi|91205355|ref|YP_537710.1| S-adenosyl-methyltransferase MraW [Rickettsia bellii RML369-C]
gi|122425755|sp|Q1RJ43.1|RSMH_RICBR RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|91068899|gb|ABE04621.1| S-adenosyl-methyltransferase MraW [Rickettsia bellii RML369-C]
Length = 305
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 124/343 (36%), Positives = 185/343 (53%), Gaps = 42/343 (12%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHI-GVDVDPSAL 171
Q HIPVML E+L F + + S++DCT GA G+S A++ ++ +D DP+ +
Sbjct: 2 QQPHIPVMLNEMLK-FLAPKAGESYLDCTFGAGGYSKALLE---NCDCYVTALDRDPNVI 57
Query: 172 AKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQ 231
KA H + F +++ G + D I++DLG+SSMQ
Sbjct: 58 KKAEEI--------------KHNYKDRFDFVETNFGNCFAKLESKKFDGIVLDLGVSSMQ 103
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ P+RGFS L DGPLDMRM Q L AE+ +N+ + ++ V+ +YG+E+ + KI
Sbjct: 104 LDIPDRGFSFLHDGPLDMRMSGQG-LSAEEFINTAEEKDLADVIYKYGDETFSRRIAKKI 162
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
V+ R + STG+L D+++S G R+G I AT+ FQA+RI +N+EL LE L
Sbjct: 163 VEVRKAARIDSTGKLADIVRSCI----GFRKGKIDPATKTFQAIRIYINNELGELEQFLA 218
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNI--NET 409
+ L GRL V+SFHSLEDRIVK F +E++E + ++D + +
Sbjct: 219 NVKNILKKDGRLVVVSFHSLEDRIVKNFF-------KENSEKPVARSKYAKEDIMLNPDK 271
Query: 410 WIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
W+ KI+T + PS +E LN R RSAKLR +KI
Sbjct: 272 WL---------KIITNKAEIPSDKEISLNVRARSAKLRAAKKI 305
>gi|15606908|ref|NP_214289.1| S-adenosyl-methyltransferase MraW [Aquifex aeolicus VF5]
gi|8134826|sp|O67721.1|RSMH_AQUAE RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|2984161|gb|AAC07695.1| hypothetical protein aq_1875 [Aquifex aeolicus VF5]
Length = 294
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 127/337 (37%), Positives = 180/337 (53%), Gaps = 47/337 (13%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H PV+L E ++ F + +VDCTLG GH+ I++ ++ L IG+D D A+ A+
Sbjct: 5 HKPVLLRESVE-FLTENGGKIYVDCTLGGGGHAKEILKKRKDIFL-IGIDRDEEAIEIAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
+L + + NF+ + VL + E I VD L DLG+S Q+
Sbjct: 63 ENLKEF-------EGRFSIYKANFKDLDLVLKE--EGI--DKVDGFLFDLGVSMYQLKG- 110
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGF+ D PLDMRMD + +L A ++N++P+ E+ R+L+EYGEE + IVQ R
Sbjct: 111 ERGFTFQEDQPLDMRMDKEQTLTACKVVNNYPERELIRILKEYGEEKFAVRIAKAIVQRR 170
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +TGELVD+I SV P + G I ATR FQA+RI VN EL++L+ +L
Sbjct: 171 KKKPIETTGELVDVILSVVPEYY--KHGKIHPATRTFQAIRIEVNKELESLKEALEKTPY 228
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
GRL VI+FHSLEDRIVK +I++
Sbjct: 229 HFNSKGRLVVITFHSLEDRIVKH-------------------------------FIKEKE 257
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ +I+TK+P+TPS EE R N RSAKLRV +KI
Sbjct: 258 KEGIFRIITKKPVTPSEEEIRENPASRSAKLRVAEKI 294
>gi|414154495|ref|ZP_11410813.1| Ribosomal RNA small subunit methyltransferase H [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
gi|411453892|emb|CCO08717.1| Ribosomal RNA small subunit methyltransferase H [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
Length = 312
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 132/342 (38%), Positives = 185/342 (54%), Gaps = 40/342 (11%)
Query: 116 HIPVMLGEVLDVFS-SSRTITSFVDCTLGAAGHSSAIIR-AHPELKLHIGVDVDPSALAK 173
HI V+L E ++ + + R I +VDCTLG AGHS I+R PE +L IG+D DP+A+
Sbjct: 5 HISVLLKESIEGLNINPRGI--YVDCTLGGAGHSYEILRRLGPEGQL-IGIDQDPAAVN- 60
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKS---VLGQIDENILRSGVDAILMDLGMSSM 230
H +K FA FR ++S L +I + + VD +L DLG+SS
Sbjct: 61 -------------HAVVKLQEFAGQFRVVQSNFSCLKKILQEMAVPAVDGVLFDLGVSSY 107
Query: 231 QVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNK 290
Q++ PERGFS + D LDMRM P A D++N + ++ ++R YGEE + +
Sbjct: 108 QLDTPERGFSYMHDAELDMRMAPDLPYSARDLVNQLAEEKLADIIRRYGEERWARRIASF 167
Query: 291 IVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSL 350
I +AR + + +TGELV++I++ P R RR+G A R FQALRIAVN EL L ++
Sbjct: 168 ICEARKKQPIATTGELVEIIKAAVPA-RARREGP-HPAKRTFQALRIAVNRELDILSQAV 225
Query: 351 HACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETW 410
L PGGR+ VI+FHSLEDRIVK T ++ +
Sbjct: 226 QDAVSVLKPGGRICVITFHSLEDRIVKDTLKAL-----------AAPCLCPPSFPVCACG 274
Query: 411 IRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
R +I K++T +PI PS E N R RSAKLRV +K+
Sbjct: 275 RRPLI-----KVITGKPIEPSRVEVANNPRARSAKLRVAEKL 311
>gi|188587754|ref|YP_001921594.1| S-adenosyl-methyltransferase MraW [Clostridium botulinum E3 str.
Alaska E43]
gi|251777689|ref|ZP_04820609.1| S-adenosyl-methyltransferase MraW [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|263446056|sp|B2V4W0.1|RSMH_CLOBA RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|188498035|gb|ACD51171.1| S-adenosyl-methyltransferase MraW [Clostridium botulinum E3 str.
Alaska E43]
gi|243082004|gb|EES47894.1| S-adenosyl-methyltransferase MraW [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 310
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 129/345 (37%), Positives = 180/345 (52%), Gaps = 41/345 (11%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
+ HI V+L E LD +VDCTLG AGHSS I+ L IG+D D AL
Sbjct: 2 EFKHISVLLNECLDALDIKDN-GIYVDCTLGGAGHSSHILERLSNEGLLIGIDQDRDALK 60
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
A+ L + + H+ NF I ++L +D VD ILMDLG+SS Q+
Sbjct: 61 AAKERLKRFENVKY-----VHS---NFYDIDNILQNLD----IPKVDGILMDLGVSSYQL 108
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ RGFS + D PLDMRM+ A +I+N + + E+ +++R YGEE + N IV
Sbjct: 109 DEGARGFSYMKDAPLDMRMNRDNDFSAYEIVNEYSEDELYKIIRNYGEERFAKRISNCIV 168
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
R + +T ELVD+I++ P + RR+G A R FQA+RI VN ELK L ++
Sbjct: 169 NRRSDKPIETTMELVDIIKAAIPA-KARREGP-HPAKRTFQAIRIEVNSELKILNQTIED 226
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
+ L PGGR+ +I+FHSLEDRIVK F R+ N T R
Sbjct: 227 GVNRLKPGGRMAIITFHSLEDRIVKLKF---------------------RELNDPCTCPR 265
Query: 413 QIIQGWNGK-----ILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ GK +++++ I P+ EE N R RSAKLR+I+K+
Sbjct: 266 EFPMCICGKKPSVRLVSRKGIEPTKEEVEENPRSRSAKLRIIEKL 310
>gi|187779894|ref|ZP_02996367.1| hypothetical protein CLOSPO_03490 [Clostridium sporogenes ATCC
15579]
gi|187773519|gb|EDU37321.1| S-adenosyl-methyltransferase MraW [Clostridium sporogenes ATCC
15579]
Length = 309
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 123/339 (36%), Positives = 178/339 (52%), Gaps = 36/339 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+L E +D + +VDCTLG GHS I++ IG+D D SAL A+
Sbjct: 5 HISVLLEETIDSLNIKED-GIYVDCTLGGGGHSKEILKKLSHKGKLIGIDQDTSALKAAK 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L + H NF +I S+L ++D VD I+MDLG+SS Q++
Sbjct: 64 ERLKDY-ENVIYVH-------NNFYNIDSILEELD----IEKVDGIVMDLGVSSYQLDEA 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
RGFS + D PLDMRM+ + A D++NS+ + E+ ++L+ YGEE + IV+ R
Sbjct: 112 SRGFSYMKDAPLDMRMNRDENFSAYDVVNSYGEEELFKILKNYGEEKFSRKIARFIVERR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +TGELV++I+ P + +R+G A R FQA+RI VN EL+ L ++ +
Sbjct: 172 TEKSIETTGELVEIIKKAIPA-KFQREGH--PAKRTFQAIRIEVNKELQILNKAIEDSVN 228
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L GRL +I+FHSLEDRIVK F + + +
Sbjct: 229 RLNKDGRLSIITFHSLEDRIVKVKF------------------KELEKPCTCPPSFPICV 270
Query: 416 QGWNG--KILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
G KI+TK+P+ PS EE+ +N R RSAKLRV ++I
Sbjct: 271 CGKKPQIKIITKKPMEPSKEEKEINSRSRSAKLRVCRRI 309
>gi|150390647|ref|YP_001320696.1| S-adenosyl-methyltransferase MraW [Alkaliphilus metalliredigens
QYMF]
gi|263433264|sp|A6TS69.1|RSMH1_ALKMQ RecName: Full=Ribosomal RNA small subunit methyltransferase H 1;
AltName: Full=16S rRNA m(4)C1402 methyltransferase 1;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH 1
gi|149950509|gb|ABR49037.1| S-adenosyl-methyltransferase MraW [Alkaliphilus metalliredigens
QYMF]
Length = 311
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 120/340 (35%), Positives = 186/340 (54%), Gaps = 34/340 (10%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
H V+L E ++ +VD TLG AGHS I++ + L IG+D D +AL+ A
Sbjct: 4 EHTSVLLKECIEALDIKEN-GIYVDGTLGGAGHSQEILKVLGKEGLLIGIDQDENALSAA 62
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L HG K NF ++ +L EN+ + +D +L+DLG+SS Q++
Sbjct: 63 GERLEE--HGT-----KVKLVHDNFHNLDKIL----ENLEITTIDGVLLDLGVSSHQLDE 111
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS + D PLDMRMD ++ A DI+N + + E+ R+++EYGE+ + IVQ
Sbjct: 112 RERGFSYMQDAPLDMRMDRRSGFSARDIVNDYSEKELERIIKEYGEDRWARRIAQFIVQE 171
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +T ++V++I+ P +G R+ A R FQA+RI VN EL+ +E+++ A
Sbjct: 172 RELAPIETTHQMVEVIKKAVP--KGARKDGPHPAKRTFQAIRIEVNQELEIIEATIEAAA 229
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNI--NETWIR 412
+ PGGR+ +ISFHSLEDRIVK F R +++ + + +
Sbjct: 230 KHMKPGGRIAIISFHSLEDRIVKNVF------------------RRLQNPCVCPPQFPVC 271
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ + KI+T++PI PS E +N R RSAKLRV +++
Sbjct: 272 KCEKEQMVKIVTRKPILPSEAELEVNPRSRSAKLRVAERV 311
>gi|392407242|ref|YP_006443850.1| S-adenosyl-methyltransferase MraW [Anaerobaculum mobile DSM 13181]
gi|390620378|gb|AFM21525.1| S-adenosyl-methyltransferase MraW [Anaerobaculum mobile DSM 13181]
Length = 300
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 125/341 (36%), Positives = 173/341 (50%), Gaps = 52/341 (15%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+PVM E++D+ S + +D TLG GH+ I P + + +G+D D ALA A
Sbjct: 6 HVPVMSDEIIDILSKIDRLDLLIDATLGLGGHALRICSTFPSVVI-LGIDQDEEALAIAS 64
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILR--SG--VDAILMDLGMSSMQ 231
L F +KS ID+ ++ SG DA+L DLG+SSMQ
Sbjct: 65 KKLAD--------------FKDRVMLVKSNFKLIDDIVMSHLSGRLADAVLFDLGVSSMQ 110
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
V++ ERGFS +GPLDMRMD Q ++ A D++N E+ + +YGEE HLL I
Sbjct: 111 VDDEERGFSFNKEGPLDMRMDKQGAISAYDLINKLTIDELTEIFYKYGEERYSHLLAKAI 170
Query: 292 VQARLR-GGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSL 350
V+ R R G + ST ELV+++++ P R G A ++FQALRI VNDE+ L+ L
Sbjct: 171 VRYRERHGQISSTTELVEIVRNALPARIQRHMGK-HPARKIFQALRIVVNDEINALKQGL 229
Query: 351 HACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETW 410
DC+ GG + V+S+HSLEDR+VK TF
Sbjct: 230 TKSVDCVRSGGVIIVLSYHSLEDRLVKHTF------------------------------ 259
Query: 411 IRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+Q G++ +K+PI P EE N R RSAKLR K
Sbjct: 260 -KQWESDGRGRLYSKKPILPKPEEVERNPRSRSAKLRAFIK 299
>gi|157826956|ref|YP_001496020.1| S-adenosyl-methyltransferase MraW [Rickettsia bellii OSU 85-389]
gi|167011836|sp|A8GVV6.1|RSMH_RICB8 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|157802260|gb|ABV78983.1| S-adenosyl-methyltransferase MraW [Rickettsia bellii OSU 85-389]
Length = 305
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 124/343 (36%), Positives = 184/343 (53%), Gaps = 42/343 (12%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHI-GVDVDPSAL 171
Q HIPVML E+L F + + S++DCT GA G+S A++ ++ +D DP+ +
Sbjct: 2 QQPHIPVMLNEMLK-FLAPKAGESYLDCTFGAGGYSKALLE---NCDCYVTALDRDPNVI 57
Query: 172 AKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQ 231
KA H + F +++ G + D I++DLG+SSMQ
Sbjct: 58 KKAEEI--------------KHNYKDRFDFVETNFGNCFAKLESKKFDGIVLDLGVSSMQ 103
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ P+RGFS L DGPLDMRM Q L AE+ +N+ + ++ V+ +YG+E+ + KI
Sbjct: 104 LDIPDRGFSFLHDGPLDMRMSGQG-LSAEEFINTAEEKDLADVIYKYGDETFSRRIAKKI 162
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
V+ R + STG+L D++ S G R+G I AT+ FQA+RI +N+EL LE L
Sbjct: 163 VEVRKAARIDSTGKLADIVHSCI----GFRKGKIDPATKTFQAIRIYINNELGELEQFLA 218
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNI--NET 409
+ L GRL V+SFHSLEDRIVK F +E++E + ++D + +
Sbjct: 219 NVKNILKKDGRLVVVSFHSLEDRIVKNFF-------KENSEKPVARSKYAKEDIMLNPDK 271
Query: 410 WIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
W+ KI+T + PS +E LN R RSAKLR +KI
Sbjct: 272 WL---------KIITNKAEIPSDKEISLNVRARSAKLRAAKKI 305
>gi|23012863|ref|ZP_00052852.1| COG0275: Predicted S-adenosylmethionine-dependent methyltransferase
involved in cell envelope biogenesis [Magnetospirillum
magnetotacticum MS-1]
Length = 319
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/340 (37%), Positives = 175/340 (51%), Gaps = 41/340 (12%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHI-GVDVDPSALAKA 174
HIPV+L EV+ + R ++VD T GA G+S AI+ A H+ +D DPSA+A+
Sbjct: 7 HIPVLLTEVIAALAP-RDGGAYVDGTFGAGGYSRAILSA---AACHVHAIDRDPSAVARG 62
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGV---DAILMDLGMSSMQ 231
+ A F I+ G + + GV D I +D+G+SSMQ
Sbjct: 63 KT--------------LEEASAGRFSMIEGRFGDMAALLRERGVNQVDGIALDIGVSSMQ 108
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ PERGFS DGPLDMRM+ + A D++N P+ E+ ++ YGEE + I
Sbjct: 109 IDQPERGFSFAKDGPLDMRMETKGP-SAADMVNDTPEGELANIIYRYGEERLSRRVAKAI 167
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
V+AR TGEL ++I+ V P R I ATR FQALRIAVNDEL LE L
Sbjct: 168 VEARRIKRFERTGELAEVIRRVVP----RSGDGIDPATRTFQALRIAVNDELGELERGLE 223
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
A LAPGG L V++FHSLEDR+VK S + +A + +D+ ++
Sbjct: 224 AAEHLLAPGGHLAVVTFHSLEDRVVK----SFLKSRSGEASRPSRHVPQAQDNGPAASFT 279
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+L+++ I P EE R N R RSAKLR +
Sbjct: 280 ----------LLSRKAIAPGQEESRANPRARSAKLRAAAR 309
>gi|255348632|ref|ZP_05380639.1| S-adenosyl-methyltransferase MraW [Chlamydia trachomatis 70]
gi|255503172|ref|ZP_05381562.1| S-adenosyl-methyltransferase MraW [Chlamydia trachomatis 70s]
gi|255506850|ref|ZP_05382489.1| S-adenosyl-methyltransferase MraW [Chlamydia trachomatis D(s)2923]
gi|385241638|ref|YP_005809478.1| S-adenosyl-methyltransferase MraW [Chlamydia trachomatis E/11023]
gi|385245245|ref|YP_005814068.1| S-adenosyl-methyltransferase MraW [Chlamydia trachomatis E/150]
gi|386262623|ref|YP_005815902.1| S-adenosyl-L-methionine-dependent methyltransferase [Chlamydia
trachomatis Sweden2]
gi|389857962|ref|YP_006360204.1| S-adenosyl-L-methionine-dependent methyltransferase [Chlamydia
trachomatis F/SW4]
gi|389858838|ref|YP_006361079.1| S-adenosyl-L-methionine-dependent methyltransferase [Chlamydia
trachomatis E/SW3]
gi|389859714|ref|YP_006361954.1| S-adenosyl-L-methionine-dependent methyltransferase [Chlamydia
trachomatis F/SW5]
gi|289525311|emb|CBJ14787.1| S-adenosyl-L-methionine-dependent methyltransferase [Chlamydia
trachomatis Sweden2]
gi|296434861|gb|ADH17039.1| S-adenosyl-methyltransferase MraW [Chlamydia trachomatis E/150]
gi|296438581|gb|ADH20734.1| S-adenosyl-methyltransferase MraW [Chlamydia trachomatis E/11023]
gi|380249034|emb|CCE14325.1| S-adenosyl-L-methionine-dependent methyltransferase [Chlamydia
trachomatis F/SW5]
gi|380249909|emb|CCE13436.1| S-adenosyl-L-methionine-dependent methyltransferase [Chlamydia
trachomatis F/SW4]
gi|380250787|emb|CCE12547.1| S-adenosyl-L-methionine-dependent methyltransferase [Chlamydia
trachomatis E/SW3]
gi|440526968|emb|CCP52452.1| 16S rRNA m(4) methyltransferase [Chlamydia trachomatis D/SotonD1]
gi|440529642|emb|CCP55126.1| 16S rRNA m(4) methyltransferase [Chlamydia trachomatis E/SotonE4]
gi|440530541|emb|CCP56025.1| 16S rRNA m(4) methyltransferase [Chlamydia trachomatis E/SotonE8]
gi|440531433|emb|CCP56943.1| 16S rRNA m(4) methyltransferase [Chlamydia trachomatis F/SotonF3]
gi|440535008|emb|CCP60518.1| 16S rRNA m(4) methyltransferase [Chlamydia trachomatis E/Bour]
Length = 300
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 131/337 (38%), Positives = 170/337 (50%), Gaps = 49/337 (14%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HIPV++ E L +F R F D T+GA GH+ A + P ++ + G D D SALA +
Sbjct: 7 HIPVLVKESLSLFRD-RNPVVFCDVTVGAGGHAEAFLTEFPSIERYDGSDRDLSALALSE 65
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
N LL + L+ +F ++D D +L DLG+SSMQ+NN
Sbjct: 66 ---NRLLPFKDRVRLRHASFE-----------EVDTLTSDGTYDGVLADLGVSSMQLNNL 111
Query: 236 ERGFSVLG-DGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS G D PLDMRMD + A ++LNS + E+G + R YGEES W +V
Sbjct: 112 ERGFSFQGEDHPLDMRMDTSRGMTASEVLNSLREEEIGEIFRNYGEESLWRSAAAAVVHF 171
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + + + +L D V P R R++ I T +FQALRI VN E L+ L + F
Sbjct: 172 RKKKKILTVKDLKDATSGVFPSYRLRKK--IHPLTLIFQALRIYVNQEGAQLKVLLDSAF 229
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
L PGGRL VISF SL+DR VK F E E R +
Sbjct: 230 RWLRPGGRLAVISFCSLDDRPVKWAF-------------REAEARGL------------- 263
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
GKILTK+ I PS EE R+N R RSAKLR +K
Sbjct: 264 -----GKILTKKVIMPSYEETRMNPRSRSAKLRCFEK 295
>gi|345860035|ref|ZP_08812364.1| S-adenosyl-methyltransferase MraW [Desulfosporosinus sp. OT]
gi|344326896|gb|EGW38345.1| S-adenosyl-methyltransferase MraW [Desulfosporosinus sp. OT]
Length = 310
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/337 (38%), Positives = 183/337 (54%), Gaps = 31/337 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D ++ + +VDCTLG +GHS ++ I D D A+ A+
Sbjct: 5 HVTVLLDETVDAVVTNPS-GRYVDCTLGGSGHSQKVLTKLDANGKLICFDQDDKAIYHAQ 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
+ G+ + +NF +++ L ++D +L V+ IL DLG+SS Q++
Sbjct: 64 E-----IFGKDE---RITLVNRNFEYLEETLKELD--LL--PVNGILFDLGVSSPQLDEA 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS + D PLDMRMDP +SL A++++NSW + E+ V+ +YGEE + IV+ R
Sbjct: 112 ERGFSYMQDAPLDMRMDPLSSLTAQELVNSWSEEELAEVIWKYGEEKWSKRIAQFIVRKR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
L +TG+LV+ I++ P RR G A R FQA+RIAVNDEL L+ L
Sbjct: 172 NERALETTGDLVEAIKAAVPAA-VRRSG-PHPAKRTFQAIRIAVNDELGVLDRVLDQALR 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
CL GGR+GVI+FHSLEDRIVK S + R E I +
Sbjct: 230 CLDHGGRIGVITFHSLEDRIVKDRMNSWLG----------------RCTCPPELPICRCE 273
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
K+LT++PI PS EE N R RSAKLRV +KI
Sbjct: 274 AKKVAKVLTRKPILPSEEEVEQNPRSRSAKLRVAEKI 310
>gi|403745265|ref|ZP_10954203.1| S-adenosyl-methyltransferase MraW [Alicyclobacillus hesperidum
URH17-3-68]
gi|403121493|gb|EJY55786.1| S-adenosyl-methyltransferase MraW [Alicyclobacillus hesperidum
URH17-3-68]
Length = 313
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 132/339 (38%), Positives = 186/339 (54%), Gaps = 34/339 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAII-RAHPELKLHIGVDVDPSALAKA 174
H V+L +D + R+ +VD TLG GH+ ++ R+HP ++ I +D D +A+ A
Sbjct: 7 HETVLLTATVDALAP-RSGGVYVDATLGGGGHTRLLLERSHPGGRV-IAMDQDETAIRNA 64
Query: 175 RAHLNSLLHGQAHPHLKTHT-FAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
+L+ + H FA+ + S LG + +D + DLG+SS Q +
Sbjct: 65 ----ATLVAAYPERLMLVHANFAEMAERLPS-LGVTE-------IDGAMFDLGVSSPQFD 112
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
PERGFS +GPLDMRMD A L A DI+N+W AE+ R+ R+YGEE + +IV+
Sbjct: 113 VPERGFSYWHEGPLDMRMDQTAKLTAADIVNTWTQAELARIFRDYGEERFARAIAERIVE 172
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +T EL ++++ P RR+G A R FQA+RIAVNDEL LE L
Sbjct: 173 ARSNRPIVTTTELAEIVKFSIPAP-ARRKGP-HPARRTFQAIRIAVNDELGVLERGLAGA 230
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
F L GGRL VISFHSLEDRIVKQ F +E A G E + Q
Sbjct: 231 FSLLRTGGRLAVISFHSLEDRIVKQVF-------KELATGC---------ICPPELPVCQ 274
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ G+++T++P++P E + N R RSAKLRVI+K+
Sbjct: 275 CGRQPKGRLVTRKPVSPDDVEVQENARARSAKLRVIEKL 313
>gi|383482394|ref|YP_005391308.1| 16S rRNA m(4)C1402 methyltransferase [Rickettsia montanensis str.
OSU 85-930]
gi|378934748|gb|AFC73249.1| 16S rRNA m(4)C1402 methyltransferase [Rickettsia montanensis str.
OSU 85-930]
Length = 307
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 129/341 (37%), Positives = 190/341 (55%), Gaps = 42/341 (12%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHI-GVDVDPSALAK 173
SH+PVML E+L+ S + S++DCT GA G+S AI+ + ++ +D DP+ + +
Sbjct: 4 SHVPVMLNEMLEALSP-KDGESYLDCTFGAGGYSKAILES---CNCYVTALDRDPNVIKR 59
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
A + +G+ ++T+ FA +F IK D I++DLG+SSMQ++
Sbjct: 60 AEEIQQN--YGERFDFVETN-FADSFAKIKE-----------KKFDGIVLDLGVSSMQLD 105
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
+RGFS L DGPLDMRM Q L AE+ +N + E+ V+ +YG+ES + +IV+
Sbjct: 106 IADRGFSFLHDGPLDMRMSGQG-LSAEEFVNMAEEKELADVIYKYGDESFSRRIAKRIVE 164
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
R + STG+L ++++S T G R+G I AT+ FQA+RI VNDEL LE L
Sbjct: 165 YRKTARIDSTGKLAEIVRSST----GFRKGKIDPATKTFQAIRIYVNDELGELEQFLVNV 220
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE--TWI 411
+ L GRL V+SFHSLEDRIVK F +E++E + +DD + W+
Sbjct: 221 KNILKKDGRLVVVSFHSLEDRIVKNFF-------KENSEKPVVRSKYAKDDMTIDPNKWL 273
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
KI+T + + PS +E LN R RSAKLR + I
Sbjct: 274 ---------KIITNKALVPSDKEVGLNIRARSAKLRAAKAI 305
>gi|383487391|ref|YP_005405071.1| 16S rRNA m(4)C1402 methyltransferase [Rickettsia prowazekii str.
GvV257]
gi|383487970|ref|YP_005405649.1| 16S rRNA m(4)C1402 methyltransferase [Rickettsia prowazekii str.
Chernikova]
gi|383488815|ref|YP_005406493.1| 16S rRNA m(4)C1402 methyltransferase [Rickettsia prowazekii str.
Katsinyian]
gi|383489655|ref|YP_005407332.1| 16S rRNA m(4)C1402 methyltransferase [Rickettsia prowazekii str.
Dachau]
gi|383499795|ref|YP_005413156.1| 16S rRNA m(4)C1402 methyltransferase [Rickettsia prowazekii str.
BuV67-CWPP]
gi|386082426|ref|YP_005999003.1| S-adenosyl-methyltransferase MraW [Rickettsia prowazekii str. Rp22]
gi|292572190|gb|ADE30105.1| S-adenosyl-methyltransferase MraW [Rickettsia prowazekii str. Rp22]
gi|380757756|gb|AFE52993.1| 16S rRNA m(4)C1402 methyltransferase [Rickettsia prowazekii str.
GvV257]
gi|380760849|gb|AFE49371.1| 16S rRNA m(4)C1402 methyltransferase [Rickettsia prowazekii str.
Chernikova]
gi|380761694|gb|AFE50215.1| 16S rRNA m(4)C1402 methyltransferase [Rickettsia prowazekii str.
Katsinyian]
gi|380762541|gb|AFE51061.1| 16S rRNA m(4)C1402 methyltransferase [Rickettsia prowazekii str.
BuV67-CWPP]
gi|380763378|gb|AFE51897.1| 16S rRNA m(4)C1402 methyltransferase [Rickettsia prowazekii str.
Dachau]
Length = 306
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 128/338 (37%), Positives = 188/338 (55%), Gaps = 38/338 (11%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRA-HPELKLHIGVDVDPSALAKA 174
HIPVML EVL V + + S++DCT GA G+S+AI+ + + + +D DP+ +
Sbjct: 5 HIPVMLSEVLAVLAP-KGYESYLDCTFGAGGYSNAILNSCYCSV---TSLDRDPNVIESV 60
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+G+ +KT+ FA +FR +K D I+MDLG+SSMQ++
Sbjct: 61 EKIKQD--YGERFNFIKTN-FADSFRKLK-----------HKKFDGIVMDLGVSSMQLDI 106
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
+RGFS L DGPLDMRM Q AE+ +N+ + E+ V+ +YG ES + IV+
Sbjct: 107 ADRGFSFLYDGPLDMRMSVQG-FSAEEFVNTADEEEIADVIYKYGNESLSRRIAKSIVEY 165
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + ST +L ++++ G R+G I +AT+ FQA+RI +N+EL LE L
Sbjct: 166 RKTARIDSTRKLAEIVRYSI----GFRKGKIDSATKTFQAIRIYINNELGELEQFLANVK 221
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
+ L GRL V+SFHSLEDRIVK F +E++E + +D+ I+
Sbjct: 222 NILKKDGRLVVVSFHSLEDRIVKNFF-------KENSEKQVARSKYAKDE------IKID 268
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
W KI+T + +TPS++E RLN R RSAKLR +KI
Sbjct: 269 PNKW-LKIITPKVLTPSSQEIRLNVRARSAKLRAAKKI 305
>gi|148657877|ref|YP_001278082.1| S-adenosyl-methyltransferase MraW [Roseiflexus sp. RS-1]
gi|262826166|sp|A5UZS9.1|RSMH_ROSS1 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|148569987|gb|ABQ92132.1| S-adenosyl-methyltransferase MraW [Roseiflexus sp. RS-1]
Length = 313
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 128/339 (37%), Positives = 185/339 (54%), Gaps = 51/339 (15%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKA 174
H PV+L EV+ R ++D T+G GH++AI+ A P+ +L +G+D DP+ALA A
Sbjct: 23 HTPVLLAEVVAGLLP-RPGGRYIDGTVGGGGHAAAILEASSPDGRL-LGIDCDPAALAAA 80
Query: 175 RAHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
A + P+ T + +FR I GQ+ V+ +++DLG+SS Q++
Sbjct: 81 AA--------RLAPYGDRVTLVRGSFREI----GQLAATSGFVQVEGVVLDLGVSSYQLD 128
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
PERGFS PLDMR+DP A + A ++N+ P+ E+ ++ YGEE + IV+
Sbjct: 129 TPERGFSFQAHAPLDMRLDPDAPVTAAHLVNNLPEQELADLIFRYGEERGSRRIARAIVE 188
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR R + +T EL ++ G RGR I ATR FQALRIAVN+EL +LE++L
Sbjct: 189 ARQRKPVTTTDELAAIVTRALGGQRGR----IHPATRTFQALRIAVNNELASLEAALPQI 244
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
D LAPGGR+ +I+FHSLEDRIVK T +R
Sbjct: 245 IDLLAPGGRMAIIAFHSLEDRIVKHT-------------------------------LRA 273
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
Q I+T++P+ S EE+R N R RSA+LRV +++
Sbjct: 274 EAQAGRLHIITRKPVEASIEEQRANPRSRSARLRVAERV 312
>gi|284991692|ref|YP_003410246.1| S-adenosyl-methyltransferase MraW [Geodermatophilus obscurus DSM
43160]
gi|284064937|gb|ADB75875.1| S-adenosyl-methyltransferase MraW [Geodermatophilus obscurus DSM
43160]
Length = 330
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/267 (43%), Positives = 151/267 (56%), Gaps = 14/267 (5%)
Query: 116 HIPVMLGEVLDVFSSSRTITS--FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAK 173
H+PV+L V ++ + + VD TLG AGHS A++RAHP L+L +G+D DP A A+
Sbjct: 17 HVPVLLDRVTELLAPACAADGAVLVDATLGLAGHSLALLRAHPGLRL-VGLDRDPDARAE 75
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
A L G A + F + VL ++ + V A+L DLG+SS+Q++
Sbjct: 76 ATRRLTD--AGVAD---RATVVPAVFDELPGVLDRLG----LTEVQAVLFDLGVSSLQLD 126
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
P+RGFS D PLDMRMDP A A D++N++P + RVLR YGEE + I +
Sbjct: 127 RPDRGFSYAADAPLDMRMDPSAPRTAADVVNTYPTDRLARVLRVYGEERFATRIAQAITR 186
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
R R T L L+++ P R G A R FQALRI VNDEL LE +L A
Sbjct: 187 ERERAPFTHTERLAHLVRASIPAATRRTGG--HPAKRTFQALRIEVNDELGVLERALPAA 244
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTF 380
D L GGR+ VI+FHSLEDRIVKQT
Sbjct: 245 LDALTVGGRIAVITFHSLEDRIVKQTL 271
>gi|195997843|ref|XP_002108790.1| hypothetical protein TRIADDRAFT_19892 [Trichoplax adhaerens]
gi|190589566|gb|EDV29588.1| hypothetical protein TRIADDRAFT_19892 [Trichoplax adhaerens]
Length = 378
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/365 (34%), Positives = 194/365 (53%), Gaps = 35/365 (9%)
Query: 103 YDYESIIQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHI 162
YD I H PV+L V+ + + + S++D T G GH+SAI++A + +++
Sbjct: 18 YDNNHIRHCSVLKHQPVLLDTVVKLLAPANG-QSYIDATFGGGGHTSAILKAATDCQIY- 75
Query: 163 GVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILR------S 216
+D DP A+A+A+ ++ T + + + ++ GQ++ +L +
Sbjct: 76 AIDTDPLAIARAKQLAST-----------TSNWIQRLKVVQCRFGQMENKLLAQEKLPPN 124
Query: 217 GVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDP--------QASLKAEDILNSWPD 268
+D I+ DLGMSSMQ+++P RGFS GPLDMRMD Q + A ++N+
Sbjct: 125 SMDGIIFDLGMSSMQIDDPLRGFSFQSSGPLDMRMDATSDEIGKHQHRITAAHVINNIDK 184
Query: 269 AEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTA 328
++ VL YGEE + I++AR + + +T LVD+I P + R+ G I A
Sbjct: 185 EDLADVLWNYGEERKARAIATAIIKARKKQPITTTDHLVDIIDRQFP-YKYRKDGQIHPA 243
Query: 329 TRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTF--LSIIDH 386
TR FQA+RI +NDEL L L+AC L GGRL VISFHSLEDRIVK+ F D
Sbjct: 244 TRTFQAIRILINDELWQLVQGLNACKALLKNGGRLIVISFHSLEDRIVKKFFNGEDRPDF 303
Query: 387 NREDAEGNEEELRNIRDDNINETWIRQIIQ---GWNGKILTKRPITPSAEEERLNCRCRS 443
+ + ++ + ++ ++ + II+ W K++ K+PI PS EE N R RS
Sbjct: 304 TSRSSPTSSKQYARLSEEGKSKIESKSIIKRNSPW--KLICKKPIYPSPEEIAHNSRARS 361
Query: 444 AKLRV 448
AKLR
Sbjct: 362 AKLRC 366
>gi|167630120|ref|YP_001680619.1| S-adenosyl-methyltransferase MraW [Heliobacterium modesticaldum
Ice1]
gi|263456105|sp|B0TGB2.1|RSMH_HELMI RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|167592860|gb|ABZ84608.1| s-adenosyl-methyltransferase mraw [Heliobacterium modesticaldum
Ice1]
Length = 313
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 143/337 (42%), Positives = 190/337 (56%), Gaps = 29/337 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HIPV+L +VL+V R ++D T+G GHS+AI++ IG+D DP+ALA A
Sbjct: 5 HIPVLLHQVLEVLKP-RPEGVYLDGTVGGGGHSAAILQKLSGRGRVIGLDQDPAALAAAG 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L S + NFRHI +V+ ++ L +D IL+D+G+SS Q++
Sbjct: 64 RKLASFGD-------RVTLVRSNFRHIGAVVAELG---LTGKIDGILLDIGVSSHQLDEA 113
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGF+ D PLDMRM+P+++L A +LN P+ E+ R+LR+YGEE + IV+ R
Sbjct: 114 ERGFTYRMDAPLDMRMNPESALTASKLLNEAPEGEIARILRDYGEERWAKRIAQFIVKRR 173
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
L TGELVD+I++ P + G A R FQALRIAVNDEL LE +L A +
Sbjct: 174 ALQPLERTGELVDIIRAAIPAAARQEGG--HPAKRTFQALRIAVNDELGALEEALPAALE 231
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
LAPGGRL VISFHSLEDRIVK F E A G D + R +
Sbjct: 232 ALAPGGRLAVISFHSLEDRIVKSFFA-------EQARG----CLCPPDFPVCACGNRPKV 280
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
KI+TK+P+ S EE R N R +SAKLR +KI
Sbjct: 281 -----KIITKKPLVGSDEEMRANPRAQSAKLRAAEKI 312
>gi|325571379|ref|ZP_08146879.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Enterococcus casseliflavus ATCC 12755]
gi|325155855|gb|EGC68051.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Enterococcus casseliflavus ATCC 12755]
Length = 331
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 129/337 (38%), Positives = 178/337 (52%), Gaps = 28/337 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H VML E +D S R +VDCTLG AGHS ++ E D D +A+ A+
Sbjct: 18 HYTVMLQETVDGLSI-RPEGVYVDCTLGGAGHSEYLLSQLSEEGHLFAFDQDQTAIDHAK 76
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L + +K+ NFR++K L Q + R VD IL DLG+SS Q++
Sbjct: 77 ERLAPYVAKGMVTFIKS-----NFRYLKEALNQ--HGVSR--VDGILYDLGVSSPQLDEA 127
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD A+L A +++N + ++ ++ YGEE + +I + R
Sbjct: 128 ERGFSYHQDAPLDMRMDQTAALTAYEVVNQFDYHQLVKIFFRYGEEKFSKQIAREIERVR 187
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +TGELVD+I++ P R+ G A RVFQA+RIAVNDEL +E SL
Sbjct: 188 QDHPIETTGELVDIIKTAIPAPARRKGGH--PAKRVFQAIRIAVNDELGVIEDSLEQAIH 245
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
LA GR+ VI+FHSLEDRIVK F +E +D I +
Sbjct: 246 LLAVNGRVSVITFHSLEDRIVKSMF---------------KEYSTPKDMPPGLPMIPEEF 290
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
Q K++T++P+ P+ EE N R RSAKLR+ +KI
Sbjct: 291 QP-TLKLITRKPLLPTEEEVAENNRSRSAKLRIAEKI 326
>gi|420262024|ref|ZP_14764667.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Enterococcus sp. C1]
gi|394771046|gb|EJF50830.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Enterococcus sp. C1]
Length = 319
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 129/337 (38%), Positives = 178/337 (52%), Gaps = 28/337 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H VML E +D S R +VDCTLG AGHS ++ E D D +A+ A+
Sbjct: 6 HYTVMLQETVDGLSI-RPEGVYVDCTLGGAGHSEYLLSQLSEEGHLFAFDQDQTAIDHAK 64
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L + +K+ NFR++K L Q + R VD IL DLG+SS Q++
Sbjct: 65 ERLAPYVAKGMVTFIKS-----NFRYLKEALNQ--HGVSR--VDGILYDLGVSSPQLDEA 115
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD A+L A +++N + ++ ++ YGEE + +I + R
Sbjct: 116 ERGFSYHQDAPLDMRMDQTAALTAYEVVNQFDYHQLVKIFFRYGEEKFSKQIAREIERVR 175
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +TGELVD+I++ P R+ G A RVFQA+RIAVNDEL +E SL
Sbjct: 176 QDHPIETTGELVDIIKTAIPAPARRKGGH--PAKRVFQAIRIAVNDELGVIEESLEQAIH 233
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
LA GR+ VI+FHSLEDRIVK F +E +D I +
Sbjct: 234 LLAVNGRVSVITFHSLEDRIVKSMF---------------KEYSTPKDMPPGLPMIPEEF 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
Q K++T++P+ P+ EE N R RSAKLR+ +KI
Sbjct: 279 QP-TLKLITRKPLLPTEEEVAENNRSRSAKLRIAEKI 314
>gi|403379030|ref|ZP_10921087.1| 16S rRNA m(4)C1402 methyltransferase [Paenibacillus sp. JC66]
Length = 316
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 133/342 (38%), Positives = 182/342 (53%), Gaps = 34/342 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D +VDCTLG AGHS I I +D D +A+ A
Sbjct: 4 HTTVLLEEAVDGLHIQPD-GIYVDCTLGGAGHSERIASRLTGPGRLIALDQDETAIHHAT 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILR--SGVDAILMDLGMSSMQV 232
+ L S H H+ T K NFRH+K VL +D + V+ IL DLG+SS Q+
Sbjct: 63 SKLQSYEH-----HV---TLVKSNFRHLKQVLLGLDIPVHEGIPQVNGILFDLGVSSPQL 114
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ ERGFS + LDMRMD + L A D++N+W + E+ R+L EYGEE + ++
Sbjct: 115 DEAERGFSYNQEAALDMRMDTSSELTAYDVVNTWEEEEIARILFEYGEEKFSRRIAARLK 174
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
Q R + +T L ++I+ P RR G A R FQA+RIAVNDEL L+++L
Sbjct: 175 QERDIEPIRTTLRLAEIIKEAIPAA-ARRTGP-HPAKRSFQAIRIAVNDELGALQTALEQ 232
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
+CLAPGGRL VI+FHSLEDRI KQTF I NR + +
Sbjct: 233 AIECLAPGGRLSVITFHSLEDRICKQTFTKQI--NRCTCPPD----------------LP 274
Query: 413 QIIQGWNG--KILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ G N K++ ++P+ PS E + N R RSAKLR+ +K+
Sbjct: 275 VCVCGLNPLLKLVNRKPLLPSERELKDNPRARSAKLRIAEKL 316
>gi|399890129|ref|ZP_10776006.1| 16S rRNA m(4)C1402 methyltransferase [Clostridium arbusti SL206]
Length = 310
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 128/337 (37%), Positives = 186/337 (55%), Gaps = 31/337 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HIPV+L E +D + +VDCTLG AGHSS I++ + IG+D D AL A
Sbjct: 5 HIPVLLDECMDGLNIKED-GIYVDCTLGGAGHSSEILKKISKNGRLIGIDQDTDALKAAS 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L + + H NF +I+ +L ++D + VD ILMDLG+SS Q++
Sbjct: 64 EKLKDY-NNVTYVH-------NNFYNIEEILSELDID----KVDGILMDLGVSSYQLDEA 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS + D PLDMRM+ SL A +I+N++ + ++ R++REYGEE + IV+ R
Sbjct: 112 ERGFSYMHDAPLDMRMNRDNSLSAYEIVNNYEENDLYRLIREYGEEKFAKKIAYFIVKRR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +T +LVD+I++ P R RR+G A R FQA+RI VN EL+ L+ ++ +
Sbjct: 172 KEEPIKTTFQLVDIIKAAIPA-RFRREGP-HPAKRTFQAIRIEVNKELEILDKAIEDGVN 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L GGR+ +I+FHSLEDRIVK F + D +D I + I
Sbjct: 230 RLNSGGRIAIITFHSLEDRIVKTKFKKLQD-----------PCECPKDFPICVCGKKPEI 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
KI+T++P S E +N R RSAKLR+ +K+
Sbjct: 279 -----KIITRKPKEASEYELEINPRSRSAKLRIGEKL 310
>gi|218296762|ref|ZP_03497468.1| S-adenosyl-methyltransferase MraW [Thermus aquaticus Y51MC23]
gi|218242851|gb|EED09385.1| S-adenosyl-methyltransferase MraW [Thermus aquaticus Y51MC23]
Length = 286
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 129/340 (37%), Positives = 179/340 (52%), Gaps = 63/340 (18%)
Query: 114 SSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAK 173
+ HIPV+ E LD+ +VD TLG AGH+ I+ + I +D DP A+ +
Sbjct: 5 TEHIPVLYQEALDLLRVQPG-QVYVDATLGGAGHTRGILERGGRV---IALDQDPEAVER 60
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQ--IDENILRSGVDAILMDLGMSSMQ 231
A+A +HP+L + NFRH+K VL + ++E V IL DLG+SS
Sbjct: 61 AKA--------LSHPNLLA--YRANFRHLKEVLKEAGVEE------VAGILADLGVSSFH 104
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
+ +P RGFS +GPLDMRM + AE+++N+ P ++ R+LR+ GEE + + I
Sbjct: 105 LEDPRRGFSYQQEGPLDMRMGLEGP-TAEEVVNTLPLEDLYRILRDLGEERQAYRIAKAI 163
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
V+AR + + +T EL ++++ G R KT FQALRI VNDEL LE L
Sbjct: 164 VEARRKARIRTTTELAEIVRRAV-GFRAAGHPARKT----FQALRIYVNDELNALEEFLR 218
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
+ LAPGGRL VI+FHSLEDRIVK R +R+ +
Sbjct: 219 QAEEVLAPGGRLVVIAFHSLEDRIVK---------------------RFLRESRL----- 252
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K+LTK+P+TPS EE N R RSAKLR +K
Sbjct: 253 ---------KVLTKKPLTPSQEEMAKNPRARSAKLRAAEK 283
>gi|269127144|ref|YP_003300514.1| S-adenosyl-methyltransferase MraW [Thermomonospora curvata DSM
43183]
gi|268312102|gb|ACY98476.1| S-adenosyl-methyltransferase MraW [Thermomonospora curvata DSM
43183]
Length = 337
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 113/277 (40%), Positives = 153/277 (55%), Gaps = 26/277 (9%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITS------FVDCTLGAAGHSSAIIRAHPELKLHIGVDV 166
Q+ HIPV+L VL + + + +VD TLG GH+ A+++AHP L+L IG+D
Sbjct: 9 QAGHIPVLLDRVLSLLAPAVESAPAGRDPLYVDATLGMGGHAEAMLQAHPRLRL-IGLDR 67
Query: 167 DPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG---VDAILM 223
DPSA+ +A L FA R + +V ++ + G +AIL
Sbjct: 68 DPSAIERAGRRLAR--------------FADRVRLVHAVYDELPRVLAELGEPHAEAILF 113
Query: 224 DLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESN 283
DLG+SS Q++ ERGF+ D PLDMRMDP L A D++N +P E+ R+LREYGEE +
Sbjct: 114 DLGVSSPQLDEAERGFAYSYDAPLDMRMDPTQPLTAADVVNGYPPEELARILREYGEERH 173
Query: 284 WHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDEL 343
+ I + R R L STG L +L++ P RR G A R FQALRI VN EL
Sbjct: 174 ARRIAAAIERERRRAPLRSTGRLAELVRQAIPAP-ARRSGG-NPAKRTFQALRIEVNGEL 231
Query: 344 KTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTF 380
E +L A L GGR+ V+S+HSLEDRI K+
Sbjct: 232 AIWERALPAALQALPVGGRVAVLSYHSLEDRITKRVL 268
>gi|359412519|ref|ZP_09204984.1| Ribosomal RNA small subunit methyltransferase H [Clostridium sp.
DL-VIII]
gi|357171403|gb|EHI99577.1| Ribosomal RNA small subunit methyltransferase H [Clostridium sp.
DL-VIII]
Length = 310
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 126/342 (36%), Positives = 183/342 (53%), Gaps = 35/342 (10%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
+ H+ V+L E ++ +VDCTLG AGHSS I++ + + IG+D D ALA
Sbjct: 2 EFKHVSVLLNECIEALDIKEN-GIYVDCTLGGAGHSSHILKHISQDGMLIGIDQDKDALA 60
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
A+ L + + H+ NF +I SVL ++D + VD ILMDLG+SS Q+
Sbjct: 61 AAKEKLKEFGNVRY-----VHS---NFYNIDSVLNELDID----KVDGILMDLGVSSYQL 108
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ RGFS + D PLDMRM+ A DI+N + + ++ ++++ YGEE + N IV
Sbjct: 109 DEASRGFSYMQDAPLDMRMNRDNDFSAYDIVNDYSEEDLYKIIKNYGEERFAKRIANFIV 168
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
R + +T ELVDLI++ P + RR+G A R FQA+RI VN ELK L ++
Sbjct: 169 TRRAEKPIETTFELVDLIKAAIPA-KMRREGP-HPAKRTFQAIRIEVNSELKILNKTIED 226
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
+ L+ GGR+ +I+FHSLEDRIVK F R + +
Sbjct: 227 GVNRLSKGGRMAIITFHSLEDRIVKLKF------------------RELENPCTCPKEFP 268
Query: 413 QIIQGWNG--KILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
I G K ++K+ I P+ +E N R RSAKLRVI+K+
Sbjct: 269 ICICGKKPLVKSISKKGIAPTDKEIEENPRSRSAKLRVIEKV 310
>gi|451819440|ref|YP_007455641.1| ribosomal RNA small subunit methyltransferase H [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451785419|gb|AGF56387.1| ribosomal RNA small subunit methyltransferase H [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 310
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 127/338 (37%), Positives = 182/338 (53%), Gaps = 33/338 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D + + +VD TLG AGHSS I++ + + IG+D D ALA A+
Sbjct: 5 HVSVLLNECIDALNI-KADGIYVDGTLGGAGHSSHIVKHLSKDGMLIGIDQDKDALAAAK 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L + NF +I S+L ++D GVD ILMDLG+SS Q++
Sbjct: 64 ERLKD--------YSNVKFVHDNFSNIDSILNELD----LEGVDGILMDLGVSSYQLDEA 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
RGFS + D PLDMRM+ A DI+N + + E+ +++++YGEE + N IV R
Sbjct: 112 SRGFSYMQDAPLDMRMNRDNDFSAYDIVNKYSEEELSKIIKDYGEERFAKRIANFIVNRR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +T ELVD+I++ P + RR G A R FQA+RI VN ELK L ++ +
Sbjct: 172 AEKPIETTLELVDIIKAAIPA-KMRRDGP-HPAKRTFQAIRIEVNSELKILNKTIEDGVN 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L GGR+ +I+FHSLEDRIVK F EL N N + + I
Sbjct: 230 KLNKGGRMAIITFHSLEDRIVKLKF---------------RELEN--PCNCPKEFPVCIC 272
Query: 416 -QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ K ++K+ I P+ +E N R RSAKLRVI+K+
Sbjct: 273 GKVPTVKTISKKGIAPTDKEIEENPRSRSAKLRVIEKL 310
>gi|410667605|ref|YP_006919976.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Thermacetogenium phaeum DSM 12270]
gi|409105352|gb|AFV11477.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Thermacetogenium phaeum DSM 12270]
Length = 315
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 135/349 (38%), Positives = 189/349 (54%), Gaps = 49/349 (14%)
Query: 106 ESIIQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIR-AHPELKLHIGV 164
++++ + HIPVML LD+ + T +VDCTLG GH+ I+R P +L IG
Sbjct: 10 KAVLLVAEVEHIPVMLETALDLLALKEGCT-YVDCTLGGGGHAGEILRRIGPRGRL-IGF 67
Query: 165 DVDPSALAKARAHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILM 223
D D AL + + L P+L T K +FRH+ VL ++ +++ VD IL
Sbjct: 68 DKDGKALERIKDVLA--------PYLDRVTLVKCDFRHLAVVLKKL--GVIQ--VDGILF 115
Query: 224 DLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESN 283
DLG+S+ Q+ +PERGFS D PLDMRMD + A+D++NS + E+ ++ YGEE
Sbjct: 116 DLGVSAYQLLDPERGFSYNYDAPLDMRMDEGSQTTAKDLVNSLSERELADIIFRYGEEKW 175
Query: 284 WHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDEL 343
+ IV+ R + +T +LV++I+ P RR+G A R FQALRIAVNDEL
Sbjct: 176 ARRIARFIVERRESAPITTTHQLVEIIKDAIPAA-ARRKG-PHPARRTFQALRIAVNDEL 233
Query: 344 KTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRD 403
+E + A L+ GGR+ VI+FHSLEDRIVK F RE A +
Sbjct: 234 AGIEEGIRAGIPFLSAGGRIVVITFHSLEDRIVKNIF-------REYAGAS--------- 277
Query: 404 DNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
I+Q I+TK+P+ PS E R N R RSAKLR +K+
Sbjct: 278 ----------ILQ-----IITKKPLVPSPAECRQNPRARSAKLRAAEKL 311
>gi|392394931|ref|YP_006431533.1| S-adenosyl-methyltransferase MraW [Desulfitobacterium dehalogenans
ATCC 51507]
gi|390526009|gb|AFM01740.1| S-adenosyl-methyltransferase MraW [Desulfitobacterium dehalogenans
ATCC 51507]
Length = 310
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 128/337 (37%), Positives = 179/337 (53%), Gaps = 31/337 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+L E +D + T +VDCTLG AGHS+ ++ E +G D DP A+ A+
Sbjct: 5 HITVLLKETVDGVVKDPSGT-YVDCTLGGAGHSAFLLGMLSEKGKLVGFDQDPLAIKNAQ 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
+ P + H +NF ++ L ++ V IL DLG+SS Q++
Sbjct: 64 DKF------KGDP--RVHLVNRNFESLEESLKSLE----LLPVQGILFDLGVSSPQLDEA 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS + D LDMRM+PQ L A+ ++N E+ +L +YGEE + IV+AR
Sbjct: 112 ERGFSYMQDAELDMRMNPQNPLSAKVLVNEGKAEELAEILWKYGEEKWSKRIVEFIVEAR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +TGELVD+I+ P G R+ A R FQALRIAVNDEL LE +L
Sbjct: 172 KQKPIETTGELVDIIKKAIPA--GARREGPHPAKRTFQALRIAVNDELGVLERALDQVIR 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
CLAPGGR+GVI+FHSLEDRIVK+ S + R + Q
Sbjct: 230 CLAPGGRVGVITFHSLEDRIVKEKMNSWLG----------------RCTCPPVFPVCQCG 273
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+++ ++PI PS +E N R RSAKLR+ +K+
Sbjct: 274 AKAMARLVHRKPILPSPQEVDANPRARSAKLRIAEKL 310
>gi|300854240|ref|YP_003779224.1| S-adenosyl-methyltransferase [Clostridium ljungdahlii DSM 13528]
gi|300434355|gb|ADK14122.1| predicted S-adenosyl-methyltransferase [Clostridium ljungdahlii DSM
13528]
Length = 309
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 122/338 (36%), Positives = 182/338 (53%), Gaps = 34/338 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+PV+L E ++ + +VDCTLG GHS I++ + IG+D D SA+ R
Sbjct: 5 HVPVLLNETINSLNIKED-GIYVDCTLGGGGHSFEILKRLSDKGRLIGIDEDTSAINATR 63
Query: 176 AHLNSLLHGQAHPHLKTHTFA-KNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
LN K T+ NF +I +L E + VD ILMDLG+SS Q++
Sbjct: 64 ERLN---------EFKNITYVHNNFYYIDEIL----EELKIDKVDGILMDLGVSSYQLDE 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS + D PLDMRM+ +SL A +++N++ + + V+R+YGEE+ + IV
Sbjct: 111 SERGFSYMKDAPLDMRMNRDSSLSAYEVINNYSEENLYNVIRDYGEENFSKRIAKFIVAE 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + + +T +LVD+I++ P R +++G A R FQA+RI VN ELK L ++
Sbjct: 171 REKAPIQTTLQLVDIIRNAIPA-RFQKEGH--PAKRTFQAIRIEVNGELKILNKAVEDSV 227
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
L GGR+ +I+FHSLEDRI+K F + E D + + I
Sbjct: 228 KRLNTGGRISIITFHSLEDRIIKTKFKKL-----------ENPCTCPPDFPLCVCGKKPI 276
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ KI+ K+PI P+ EE+ N R +S+KLR +KI
Sbjct: 277 V-----KIINKKPIIPTKEEKEKNSRSKSSKLRTAEKI 309
>gi|435854486|ref|YP_007315805.1| S-adenosyl-methyltransferase MraW [Halobacteroides halobius DSM
5150]
gi|433670897|gb|AGB41712.1| S-adenosyl-methyltransferase MraW [Halobacteroides halobius DSM
5150]
Length = 310
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 126/342 (36%), Positives = 187/342 (54%), Gaps = 39/342 (11%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
+HIPV+L EVL+ + + + +VDCTLG AGHS I++ KL +G+D D +A+ A
Sbjct: 4 NHIPVLLDEVLE-YLNCKEDGIYVDCTLGGAGHSKEIVKQLDSGKL-VGIDQDKAAIEAA 61
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L+ K N++ + VL Q+ + VD L DLG+SS Q++N
Sbjct: 62 WEKLSDYSD-------KVELVRANYQELNQVLDQLGID----KVDGFLFDLGVSSYQLDN 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
P RGFS + PLDMRMD + + A DI+N + +E+ +++R+YGEE + + IV
Sbjct: 111 PSRGFSYRYEAPLDMRMDQRQNKTAADIVNDYSKSELTKIIRKYGEEKWANRIAEFIVDY 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + + +T ELV +I+ P RR+G A R FQA+RIAVN+EL+ +E ++
Sbjct: 171 RKQERIKTTTELVKIIKDAIPAP-ARRKGP-HPAKRTFQAIRIAVNNELEIVEEAIQDAI 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTF----LSIIDHNREDAEGNEEELRNIRDDNINETW 410
+ L P GR+ VISFHSLED+IVK F + I + G ++E +
Sbjct: 229 ERLNPKGRICVISFHSLEDKIVKHNFKELAIDCICPPKLPICGCDKEAK----------- 277
Query: 411 IRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
K++TK I+P+ EE N R RS+KLRV +KI
Sbjct: 278 ---------VKVITKSAISPTKEEISQNRRARSSKLRVAEKI 310
>gi|365174749|ref|ZP_09362188.1| S-adenosyl-methyltransferase MraW [Synergistes sp. 3_1_syn1]
gi|363614161|gb|EHL65659.1| S-adenosyl-methyltransferase MraW [Synergistes sp. 3_1_syn1]
Length = 312
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 130/342 (38%), Positives = 176/342 (51%), Gaps = 49/342 (14%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
H+ VML EVL S ++ + +D TLG AGHS I++ P L+ G D D A A
Sbjct: 3 EHLSVMLDEVLAAVESPDSVETVIDATLGLAGHSIEILKKCPRAFLY-GFDQDAEAREIA 61
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L+ + A NFR+I G + E SG D IL DLG+S++Q+
Sbjct: 62 LERLSPFAP-------RFEIVADNFRNI----GLLKEKEGFSGADVILFDLGVSNLQITE 110
Query: 235 PERGFSVLGDGPLDMRMDP----QASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNK 290
PERGFS DGPLDMRMD KAE+IL + E+ + R+YGEE +
Sbjct: 111 PERGFSFQYDGPLDMRMDAGDEESCHPKAEEILRTADIRELTEIFRDYGEERYAFQIAKG 170
Query: 291 IVQARLRGG-LHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESS 349
IV+ R GG LHST ELV+LI+ + P R+ G A ++FQALRIAVNDE+ L +
Sbjct: 171 IVRHREHGGELHSTTELVELIRRILPAPVQRKMGG-HPARKIFQALRIAVNDEINALSEA 229
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINET 409
L + L PGG+ VIS+HSLEDR+VK F R ++D +
Sbjct: 230 LDGAAELLNPGGKAIVISYHSLEDRMVKHRF------------------RKWKEDEL--- 268
Query: 410 WIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
G+ + ++ I P+ EE N + RSAKLR+ Q+
Sbjct: 269 ----------GEPVPRKAILPTEEEIERNYKSRSAKLRIFQR 300
>gi|219849709|ref|YP_002464142.1| S-adenosyl-methyltransferase MraW [Chloroflexus aggregans DSM 9485]
gi|263445784|sp|B8G5X3.1|RSMH_CHLAD RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|219543968|gb|ACL25706.1| S-adenosyl-methyltransferase MraW [Chloroflexus aggregans DSM 9485]
Length = 301
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 132/340 (38%), Positives = 176/340 (51%), Gaps = 49/340 (14%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRA-HPELKLHIGVDVDPSALAKA 174
H+PVM+ EV+ + R ++D T+G GH+ A+++A P +L +G+D DP+AL
Sbjct: 7 HVPVMVAEVVAALAP-RPGGRYIDATVGGGGHALAVLQAARPGGRL-LGIDADPAALVAT 64
Query: 175 RAHLNSLLHGQAHPHLKTHTFA--KNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
L A L+ H +F + + G+ VD IL DLG+SS Q+
Sbjct: 65 ADRL-------AEAGLREHAVLCHGSFADLAVIAGETGF----INVDGILFDLGVSSYQL 113
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ PERGFS DGPLDMR+DP A D++N+ + E+ V+ +YGEE + IV
Sbjct: 114 DTPERGFSFAADGPLDMRLDPTQGPTAADLVNTLSERELADVIFQYGEEHAARRIARAIV 173
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
+ R T +L +I V G RGR I ATR FQALRIAVN EL L ++L
Sbjct: 174 ERRRTQPFQRTADLAAVIARVVGGRRGR----IHPATRTFQALRIAVNRELDRLAAALPQ 229
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
LAPGGRL VISFHSLEDRIVKQ F+ R +AEG L
Sbjct: 230 AVHLLAPGGRLVVISFHSLEDRIVKQ-FM------RAEAEGATPRL-------------- 268
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
I TK+P+ + +E N R RSAKLRV +I
Sbjct: 269 --------VINTKKPVAATDDEVATNPRARSAKLRVATRI 300
>gi|294056587|ref|YP_003550245.1| S-adenosyl-methyltransferase MraW [Coraliomargarita akajimensis DSM
45221]
gi|293615920|gb|ADE56075.1| S-adenosyl-methyltransferase MraW [Coraliomargarita akajimensis DSM
45221]
Length = 318
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 124/338 (36%), Positives = 181/338 (53%), Gaps = 37/338 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+PV+L E L++ S R +D T G GH+ A++ A + + + +D DP A+ +A
Sbjct: 17 HVPVLLRETLELLSP-RAGAKLLDGTFGGGGHTRALLGAAEGVTV-VALDRDPEAVERA- 73
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
A + + F + FR + G + ++ SG D IL D G+SS Q++
Sbjct: 74 AEVEA-------------EFGQRFRLVSMNFGDLC-DLEESGFDGILFDFGLSSFQLDTA 119
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D P+DMRM+P A + A + L + + + R +R YGEE W + I+ AR
Sbjct: 120 ERGFSFREDAPVDMRMNPNAGISAAEFLETADEEALVRAVRNYGEEKRWRKVVQSILSAR 179
Query: 296 LRGGLHSTGELVDLI-QSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
G L T L +LI +V PG RGR+ I ATR FQ +R+ VNDEL +E L A F
Sbjct: 180 GTGRLQRTSSLSELIADAVGPGPRGRKT--IHPATRSFQGIRVEVNDELNAIERGLPAAF 237
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
+ L GG L ISFHSLEDRIVK+ + G E + R + RQ+
Sbjct: 238 ERLQSGGTLAAISFHSLEDRIVKRFCRRMA--------GRPEHAGDSRTQD-----ERQV 284
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ GK+++ RPI P+ +E +N R RSA++R I+K+
Sbjct: 285 L----GKMISTRPIVPAEDEIAINPRSRSARMRAIRKL 318
>gi|182626151|ref|ZP_02953911.1| S-adenosyl-methyltransferase MraW [Clostridium perfringens D str.
JGS1721]
gi|177908588|gb|EDT71113.1| S-adenosyl-methyltransferase MraW [Clostridium perfringens D str.
JGS1721]
Length = 310
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 127/338 (37%), Positives = 184/338 (54%), Gaps = 33/338 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E ++ + +VDCTLG AGHSS I++ IG D D AL A
Sbjct: 5 HVSVLLDECINALNIKED-GIYVDCTLGGAGHSSEIVKRLSSDGRLIGFDQDKDALKAA- 62
Query: 176 AHLNSLLHGQAHPHLKTHTFA-KNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
G+ K T+ NF I VL + + GVD ILMDLG+SS Q++N
Sbjct: 63 --------GERLKDYKNVTYVHSNFYAIYDVLTDLGID----GVDGILMDLGVSSYQLDN 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS + D PLDMRM+ + A +I+N++ + E+ R+++EYGEE + + IV+
Sbjct: 111 GERGFSYMQDAPLDMRMNRENEFSAYEIVNTYSEEELYRIIKEYGEEKFAKRIASFIVKN 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + ST ELV++I++ P + RR+G A R FQA+RI VN EL+ + ++
Sbjct: 171 REEKNIESTLELVEIIKAAIPA-KARREGP-HPAKRTFQAIRIEVNKELEIISKTILDGV 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
L GGR+ +I+FHSLEDRIVK TF +EL N +E +
Sbjct: 229 KKLNKGGRMAIITFHSLEDRIVKNTF---------------KELAN-PCTCPSEFPVCVC 272
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ K+++++PI S EE N R RSAKLR+I+K+
Sbjct: 273 NRKPEVKLISRKPIEASKEELEFNPRSRSAKLRIIEKL 310
>gi|383501539|ref|YP_005414898.1| 16S rRNA m(4)C1402 methyltransferase [Rickettsia australis str.
Cutlack]
gi|378932550|gb|AFC71055.1| 16S rRNA m(4)C1402 methyltransferase [Rickettsia australis str.
Cutlack]
Length = 306
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 127/339 (37%), Positives = 187/339 (55%), Gaps = 40/339 (11%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HIPVML EVL V + S++DCT GA G+S AI+ + + +D DP+ + KA
Sbjct: 5 HIPVMLSEVLKVLDP-KGGESYLDCTFGAGGYSKAILESCD--CYVVALDRDPNVIKKAA 61
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
+ + + ++T+ FA +F +K D I++DLG+SSMQ++
Sbjct: 62 EIKQNYV--ERFDFIETN-FADSFAKLKE-----------KKFDGIVLDLGVSSMQLDKA 107
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
+RGFS L DGPLDMRM Q AE+++N+ + E+ ++ +YG ES + +IV+ R
Sbjct: 108 DRGFSFLHDGPLDMRMSGQG-FSAEELVNTLEEKEIADIIYKYGNESFSRRIAKRIVEYR 166
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ STG+L ++++S G R+G I AT+ FQA+RI +NDEL LE L +
Sbjct: 167 KTARIDSTGKLAEIVRSSI----GFRKGKIDPATKTFQAIRIYINDELGELERFLVNVKN 222
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE--TWIRQ 413
L GRL V+SFHSLEDRIVK F +E++E + + D I + W+
Sbjct: 223 ILKKDGRLVVVSFHSLEDRIVKNFF-------KENSEKPVARSKYAKYDIIIDPNKWL-- 273
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
KI+T + + PS +E RLN R RSAKLR +KI
Sbjct: 274 -------KIITNKALAPSDKEIRLNVRARSAKLRATKKI 305
>gi|282882847|ref|ZP_06291452.1| S-adenosyl-methyltransferase MraW [Peptoniphilus lacrimalis 315-B]
gi|281297258|gb|EFA89749.1| S-adenosyl-methyltransferase MraW [Peptoniphilus lacrimalis 315-B]
Length = 320
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 127/342 (37%), Positives = 185/342 (54%), Gaps = 41/342 (11%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+ EVL+ + R ++D T+G AGHS I + L IG+D D A+ K++
Sbjct: 5 HVSVLYNEVLENLNI-RENKIYMDATIGGAGHSKGIAKILNNSGLLIGIDQDKDAIKKSQ 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L+ + F N+++ + +L +++ VD IL+DLG+SS Q +
Sbjct: 64 EVLSE--------YENVKLFNTNYKNFEEIL----DSLHIKKVDGILLDLGVSSYQFDKG 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNW-HLLQNKIVQA 294
ERGFS D LDMRMD + L A+ I+N + E+ R+++EYGEE NW + IVQ
Sbjct: 112 ERGFSYRFDSELDMRMDKSSPLTAKTIVNEYSKDELYRIIKEYGEE-NWAKRISEFIVQE 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R +++T +LV++I+ P +G R+ A R FQALRI VNDEL L+ S++
Sbjct: 171 RKIKKINTTFDLVEVIKKAVP--KGARRDGPHPAKRAFQALRIEVNDELNVLKKSIYKFV 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
+ L PGGRL +ISFHSLEDRIVK F R + D + QI
Sbjct: 229 ERLNPGGRLAIISFHSLEDRIVKNAF------------------RYLYSDCVCPP--EQI 268
Query: 415 IQGWNGK----ILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
I + K I+T++PI P+ EE + N R SAKLRV +K+
Sbjct: 269 ICTCDKKREIEIITRKPIVPTKEEIKNNNRSHSAKLRVAEKL 310
>gi|210622330|ref|ZP_03293099.1| hypothetical protein CLOHIR_01047 [Clostridium hiranonis DSM 13275]
gi|210154318|gb|EEA85324.1| hypothetical protein CLOHIR_01047 [Clostridium hiranonis DSM 13275]
Length = 311
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 122/341 (35%), Positives = 185/341 (54%), Gaps = 34/341 (9%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
+ +H+ V+L E +D + + +VDCT+G AGHS I++ L IG D D +A+A
Sbjct: 2 EFNHVSVLLNECIDNLNI-KPDGVYVDCTMGGAGHSKEIVKRLSSDGLFIGFDQDKNAIA 60
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
A+ L A + NF +IK L E I +D +L DLG+SS Q+
Sbjct: 61 TAKERL-------AEYSDRVKFVHSNFENIKEEL----EKIGVHKIDGVLADLGVSSHQL 109
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ +RGFS + D PLDMRMD + A +++N + + E+ +++++YGE++ + IV
Sbjct: 110 DEADRGFSYMQDAPLDMRMDVRKDFSAYNVVNEYTEEELAKIIKDYGEDNWAKRIAKFIV 169
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
+ R + +TGELVD+I+ P + R A R FQA+RI VN+EL + +
Sbjct: 170 EGRAEKPIETTGELVDIIKKAIP--KKARIDGPHPAKRTFQAIRIEVNNELGVITKMIDD 227
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTF--LSIIDHNREDAEGNEEELRNIRDDNINETW 410
+ PGGR+ +I+FHSLEDRIVK F LS+ D E+ + D ++E
Sbjct: 228 ACSIMNPGGRICIITFHSLEDRIVKNEFKYLSL------DCVC-PPEMPFCQCDKVSEV- 279
Query: 411 IRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PI PSAEE +N R RSAKLRV +K
Sbjct: 280 ----------KVITRKPILPSAEEIEMNPRSRSAKLRVAEK 310
>gi|433655390|ref|YP_007299098.1| S-adenosyl-methyltransferase MraW [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433293579|gb|AGB19401.1| S-adenosyl-methyltransferase MraW [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 310
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 126/343 (36%), Positives = 193/343 (56%), Gaps = 39/343 (11%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
+ H V+L E ++ + + +VD TLG GHS I+R P+ +L I +D D AL
Sbjct: 2 EFKHESVLLNETIE-YLKVKPDGVYVDGTLGGGGHSYEILRRLPKGRL-IAIDRDMDALH 59
Query: 173 KARAHLNSLLHGQAHPHLKTHTFA-KNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQ 231
A L TF N+++IK++L ID I R +D ++DLG+SS Q
Sbjct: 60 AASMRLKDF---------NNVTFVHDNYKNIKNILKNID--IER--IDGAILDLGVSSYQ 106
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ +RGFS + D PLDMRMD +++L AE ++N++ + ++ ++L +YGEE + I
Sbjct: 107 LDEVKRGFSYMHDAPLDMRMDKESALTAEHVVNNYSEDDIAKILFDYGEEKWAKRIAKFI 166
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
V+ R + + +T +LVD+I+ P + RR G A R FQA+RI VNDELK L+S++
Sbjct: 167 VEERKKRPIKTTFQLVDIIKKAVPASK-RRTGP-HPAKRTFQAIRIEVNDELKGLDSAID 224
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRN--IRDDNINET 409
D + P GR+ +I+FHSLEDRIVK + ++L N N+ T
Sbjct: 225 DFIDVMNPNGRIAIITFHSLEDRIVKNMY---------------KKLENPCTCPKNLPCT 269
Query: 410 WIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++ + KI+TK+P+TP+ EE N R RSAKLRV +K+
Sbjct: 270 CGKKPVI----KIITKKPVTPNKEELETNPRSRSAKLRVAEKL 308
>gi|440781900|ref|ZP_20960128.1| 16S rRNA m(4)C1402 methyltransferase [Clostridium pasteurianum DSM
525]
gi|440220618|gb|ELP59825.1| 16S rRNA m(4)C1402 methyltransferase [Clostridium pasteurianum DSM
525]
Length = 310
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 128/337 (37%), Positives = 187/337 (55%), Gaps = 31/337 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HIPV+L E ++ + ++DCTLG AGHSS II+ E IG+D D A+ A
Sbjct: 5 HIPVLLDECIEGLNIKED-GIYIDCTLGGAGHSSEIIKRLSEKGRLIGIDQDTDAINAAS 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L + H NF +IK++L ++ NI VD ILMDLG+SS Q++
Sbjct: 64 KKLADY-DNVTYVH-------NNFYNIKNILDEL--NI--DKVDGILMDLGVSSYQLDEA 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS + D PLDMRM+ ++++ A +I+N++ +A++ R+++ YGEE + + I + R
Sbjct: 112 ERGFSYMNDAPLDMRMNRESNISAYEIVNNYEEADLYRIIKAYGEEKFAKRIASFIAKER 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +T ELVD+I+S P R RR+G A R FQA+RI VN EL+ L ++
Sbjct: 172 EERPIRTTFELVDIIKSAIPA-RFRREGP-HPAKRTFQAIRIEVNKELEILNKAIEDAVS 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L GGR+ +I+FHSLEDRIVK F +EL N + + I
Sbjct: 230 KLNRGGRIAIITFHSLEDRIVKTKF---------------KELEN-PCECPKDFPICVCG 273
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ KILT++P + E +N R RSAKLR+ +KI
Sbjct: 274 KSPKIKILTRKPKEANEYELEINPRSRSAKLRIGEKI 310
>gi|392426984|ref|YP_006467978.1| S-adenosyl-methyltransferase MraW [Desulfosporosinus acidiphilus
SJ4]
gi|391356947|gb|AFM42646.1| S-adenosyl-methyltransferase MraW [Desulfosporosinus acidiphilus
SJ4]
Length = 310
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 133/340 (39%), Positives = 181/340 (53%), Gaps = 35/340 (10%)
Query: 115 SHIPVMLGEVLD-VFSSSRTITSFVDCTLGAAGHSSAIIRA-HPELKLHIGVDVDPSALA 172
H+ V+L E +D V + I +VDCTLG AGHS I+ + +P +L I D D A+
Sbjct: 4 QHVTVLLNETVDGVVTDPSGI--YVDCTLGGAGHSQRILESLNPRGRL-ICFDQDEHAIR 60
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
H L G L KNF +++ L E + V I+ DLG+SS Q+
Sbjct: 61 ----HAQELFSGDERVLL----VKKNFENLEKTL----EELGLQPVQGIMFDLGVSSPQL 108
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ ERGFS + D PLDMRMD Q S+ A++I+N+W + E+ +++ YGEE + IV
Sbjct: 109 DEAERGFSYMQDAPLDMRMDAQNSMTAKEIVNTWREEELAQIIWNYGEERWAKRIAQFIV 168
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
Q R L +TG+LV +I++ P RR G A R FQALRIAVNDEL L+ L
Sbjct: 169 QKRQERPLETTGDLVSVIKAAVPAA-ARRDG-PHPAKRTFQALRIAVNDELGVLDRVLDQ 226
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
CL GGR+ VI+FHSLEDRIVK+ S + R E +
Sbjct: 227 ALRCLDRGGRIAVITFHSLEDRIVKERMKSWLG----------------RCTCPPELPVC 270
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ ++LT++PI PS EE N R RSAKLR+ +KI
Sbjct: 271 RCGAKALARVLTRKPIFPSEEEIEKNPRARSAKLRIAEKI 310
>gi|374312770|ref|YP_005059200.1| S-adenosyl-methyltransferase MraW [Granulicella mallensis MP5ACTX8]
gi|358754780|gb|AEU38170.1| S-adenosyl-methyltransferase MraW [Granulicella mallensis MP5ACTX8]
Length = 324
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 126/341 (36%), Positives = 181/341 (53%), Gaps = 45/341 (13%)
Query: 112 QQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
++ H+PV+L E L + R +VD TLG GHS+AI R I D DP A+
Sbjct: 16 ERPQHVPVLLEESLK-YLKVRPGGVYVDATLGLGGHSAAIARQLGGAGKLICFDRDPEAM 74
Query: 172 AKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQ 231
AKA+A L ++ + P + R++ +IDE + + +D +L D G+SS+Q
Sbjct: 75 AKAQARLAAVAE-ELGPEMP------QVRYVPRAFSEIDEEVEPNSLDGLLADFGVSSLQ 127
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ RGFS DGPLDMRMD ++ L A+ ++N + ++ ++ E+GEE + I
Sbjct: 128 LDEAHRGFSFRTDGPLDMRMDSRSELTAQQVVNQADEEDLANLIYEFGEERRSRRIARAI 187
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
V+AR + +T EL +I +VTP M+G + I ATR FQALRI VNDE+ ++S LH
Sbjct: 188 VRAR---PIETTAELARVISAVTPSMKGDK---IHPATRTFQALRIRVNDEIGQIQSLLH 241
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
+ L PGGR+ +ISFHSLEDR VK F RE A+ E
Sbjct: 242 SAESLLKPGGRVVLISFHSLEDRPVKDAF-------REGAKAGRLE-------------- 280
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
ILTK+P+ +E N R RSAKLR +K+
Sbjct: 281 ----------ILTKKPVVAGEQESLRNPRSRSAKLRAAEKV 311
>gi|340355092|ref|ZP_08677785.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Sporosarcina newyorkensis 2681]
gi|339622773|gb|EGQ27287.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Sporosarcina newyorkensis 2681]
Length = 317
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 126/316 (39%), Positives = 171/316 (54%), Gaps = 31/316 (9%)
Query: 137 FVDCTLGAAGHSSAIIRA-HPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTF 195
+VDCTLG AGHS I++ P+ +L I D D +A+ A+ L H
Sbjct: 31 YVDCTLGGAGHSEEIVKLLSPKGQL-ICFDQDMTAIEAAKKKLEKYAAQVQFVH------ 83
Query: 196 AKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQA 255
NF+ +K LG N+ + VD IL DLG+SS Q++ PERGFS D PLDMRMD A
Sbjct: 84 -ANFKELKKELG----NLGITEVDGILYDLGVSSPQLDTPERGFSYHHDAPLDMRMDTSA 138
Query: 256 SLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTP 315
L A +++N WP ++ R+ YGEE + KI +AR + +TGEL +LI++ P
Sbjct: 139 PLTAYEVVNEWPYEDLVRIFFRYGEEKFSKQIARKIEEARKNEPIRTTGELAELIKTGIP 198
Query: 316 GMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRI 375
RR G A RVFQA+RIAVNDEL E SL L GR+ VI+FHSLEDR+
Sbjct: 199 AA-ARRTGG-HPAKRVFQAIRIAVNDELGAAEQSLTDALTVLREKGRISVITFHSLEDRL 256
Query: 376 VKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEE 435
K F +E ++ D N I + + + K++T++PI P+ EE
Sbjct: 257 CKNIF---------------KEAASMPDLPPNLPVIPEGMDP-DFKLITRKPIVPTDEEI 300
Query: 436 RLNCRCRSAKLRVIQK 451
N R RSAKLR+ +K
Sbjct: 301 ERNKRARSAKLRIAEK 316
>gi|110800523|ref|YP_696548.1| S-adenosyl-methyltransferase MraW [Clostridium perfringens ATCC
13124]
gi|110803229|ref|YP_699148.1| S-adenosyl-methyltransferase MraW [Clostridium perfringens SM101]
gi|168206081|ref|ZP_02632086.1| S-adenosyl-methyltransferase MraW [Clostridium perfringens E str.
JGS1987]
gi|168210772|ref|ZP_02636397.1| S-adenosyl-methyltransferase MraW [Clostridium perfringens B str.
ATCC 3626]
gi|168215224|ref|ZP_02640849.1| S-adenosyl-methyltransferase MraW [Clostridium perfringens CPE str.
F4969]
gi|168215494|ref|ZP_02641119.1| S-adenosyl-methyltransferase MraW [Clostridium perfringens NCTC
8239]
gi|169343521|ref|ZP_02864520.1| S-adenosyl-methyltransferase MraW [Clostridium perfringens C str.
JGS1495]
gi|422346534|ref|ZP_16427448.1| ribosomal RNA small subunit methyltransferase H [Clostridium
perfringens WAL-14572]
gi|422874785|ref|ZP_16921270.1| 16S rRNA m(4)C1402 methyltransferase [Clostridium perfringens F262]
gi|122958788|sp|Q0TP92.1|RSMH_CLOP1 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|123047275|sp|Q0SRV9.1|RSMH_CLOPS RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|110675170|gb|ABG84157.1| S-adenosyl-methyltransferase MraW [Clostridium perfringens ATCC
13124]
gi|110683730|gb|ABG87100.1| S-adenosyl-methyltransferase MraW [Clostridium perfringens SM101]
gi|169298081|gb|EDS80171.1| S-adenosyl-methyltransferase MraW [Clostridium perfringens C str.
JGS1495]
gi|170662388|gb|EDT15071.1| S-adenosyl-methyltransferase MraW [Clostridium perfringens E str.
JGS1987]
gi|170711095|gb|EDT23277.1| S-adenosyl-methyltransferase MraW [Clostridium perfringens B str.
ATCC 3626]
gi|170713370|gb|EDT25552.1| S-adenosyl-methyltransferase MraW [Clostridium perfringens CPE str.
F4969]
gi|182382153|gb|EDT79632.1| S-adenosyl-methyltransferase MraW [Clostridium perfringens NCTC
8239]
gi|373226079|gb|EHP48406.1| ribosomal RNA small subunit methyltransferase H [Clostridium
perfringens WAL-14572]
gi|380304426|gb|EIA16715.1| 16S rRNA m(4)C1402 methyltransferase [Clostridium perfringens F262]
Length = 310
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 126/341 (36%), Positives = 185/341 (54%), Gaps = 33/341 (9%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
+ H+ V+L E ++ + +VDCTLG AGHSS I++ IG D D AL
Sbjct: 2 EFKHVSVLLDECINALNIKED-GIYVDCTLGGAGHSSEIVKRLSSDGRLIGFDQDKDALK 60
Query: 173 KARAHLNSLLHGQAHPHLKTHTFA-KNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQ 231
A G+ K T+ NF I VL + + GVD ILMDLG+SS Q
Sbjct: 61 AA---------GERLKDYKNVTYVHSNFYAIYDVLTDLGID----GVDGILMDLGVSSYQ 107
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++N ERGFS + D PLDMRM+ + A +I+N++ + E+ R+++EYGEE + + I
Sbjct: 108 LDNGERGFSYMQDAPLDMRMNRENEFSAYEIVNTYSEEELYRIIKEYGEEKFAKRIASFI 167
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
V+ R + +T ELV++I++ P + RR+G A R FQA+RI VN EL+ + ++
Sbjct: 168 VKNREEKNIETTLELVEIIKAAIPA-KARREGP-HPAKRTFQAIRIEVNKELEIISKTIL 225
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
L GGR+ +I+FHSLEDRIVK TF +EL N +E +
Sbjct: 226 DGVKKLNKGGRMAIITFHSLEDRIVKNTF---------------KELAN-PCTCPSEFPV 269
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ K+++++PI S EE N R RSAKLR+I+K+
Sbjct: 270 CVCNRKPEVKLISRKPIEASKEELEFNPRSRSAKLRIIEKL 310
>gi|51892339|ref|YP_075030.1| S-adenosyl-methyltransferase MraW [Symbiobacterium thermophilum IAM
14863]
gi|116241373|sp|Q67Q57.1|RSMH_SYMTH RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|51856028|dbj|BAD40186.1| putative S-adenosylmethionine-dependent methyltransferase
[Symbiobacterium thermophilum IAM 14863]
Length = 318
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 128/349 (36%), Positives = 181/349 (51%), Gaps = 54/349 (15%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIR-AHPELKLHIGVDVDPSALAKA 174
HIPV+L E ++ + R +++DCT+G GH++ I+R + P+ +L IG+D D +AL A
Sbjct: 5 HIPVLLQETMEALAV-RPGGTYIDCTVGGGGHAAEILRRSSPDGRL-IGLDQDENALRAA 62
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L G ++T NF H+ V ++ D +LMD+G+SS Q +
Sbjct: 63 GDRLAPF--GDRVTLVRT-----NFEHVADVADRLGLG----AADGVLMDIGVSSHQFDE 111
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS D PLDMRMD L A ++N W + E+ RV+REYGEE + IV+A
Sbjct: 112 GERGFSYHHDAPLDMRMDRTRPLTAAVLVNEWEEEEIARVIREYGEERWASRIAQFIVRA 171
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + + +TG+LV++I++ P RR+G A R FQA+RIAVNDEL LE L
Sbjct: 172 RRQRPIETTGQLVEIIKAAIPAS-ARREGG-HPARRTFQAIRIAVNDELGALERGLEGAL 229
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
L PGGRL VI+FHSLEDRIVKQTF W +
Sbjct: 230 RVLRPGGRLAVITFHSLEDRIVKQTFAR---------------------------WAKPC 262
Query: 415 I-----------QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ + +T++P+ S E + N R RSA LR + K+
Sbjct: 263 TCPPDLPVCVCGKAPLAEPVTRKPVRASGAEVKANPRSRSATLRAVVKL 311
>gi|429204857|ref|ZP_19196138.1| 16S rRNA m(4)C1402 methyltransferase [Lactobacillus saerimneri 30a]
gi|428146719|gb|EKW98954.1| 16S rRNA m(4)C1402 methyltransferase [Lactobacillus saerimneri 30a]
Length = 315
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 186/339 (54%), Gaps = 30/339 (8%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHI-GVDVDPSALAK 173
+HI V+L E +D ++ T +VDCTLG GH+ I+ H H+ D D +A+
Sbjct: 5 NHITVLLNEAVDALITTPDGT-YVDCTLGGGGHTKNILN-HLSATGHLYSFDQDDTAITY 62
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
R L + A HL NFR++K L + R V +L DLG+SS Q +
Sbjct: 63 NRKQLAPAI---AAGHLTL--VESNFRNLKEALTH--HGVQR--VRGVLYDLGVSSPQFD 113
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
+ ERGFS D PLDMRMD + +L A+ ++N W ++ ++ YG+E + +I +
Sbjct: 114 DAERGFSYRYDAPLDMRMDQRQALTAQTVVNEWEYGQLVKIFHRYGDEKFAKQIARRIEK 173
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
R + +TGELVD+I++ P R RR G A +VFQA+RIAVNDE+ LE+SLH
Sbjct: 174 VRQDHPIVTTGELVDIIKTAIPA-RARRTGG-HPAKKVFQAIRIAVNDEMGALEASLHQA 231
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
D LA GGR+ VI+F LEDRIVK F RE ++ +RD I
Sbjct: 232 LDLLAVGGRVAVITFQPLEDRIVKDIF-------REHSQ--------VRDVPQGLPVIPP 276
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+Q + K++T++PI PSA E N R SA+LRVI++I
Sbjct: 277 ELQP-DFKLVTRKPIVPSATELANNRRAHSARLRVIERI 314
>gi|320334677|ref|YP_004171388.1| ribosomal RNA small subunit methyltransferase H [Deinococcus
maricopensis DSM 21211]
gi|319755966|gb|ADV67723.1| Ribosomal RNA small subunit methyltransferase H [Deinococcus
maricopensis DSM 21211]
Length = 295
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 131/345 (37%), Positives = 177/345 (51%), Gaps = 58/345 (16%)
Query: 108 IIQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVD 167
+ Q +HIPV+ EVLD + FVD TLG AGH+ ++ A + G+D D
Sbjct: 1 MTDQSPLTHIPVLATEVLDALQP-QPGQVFVDGTLGGAGHTRLLLAAGATV---YGIDQD 56
Query: 168 PSALAKARAH-LNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLG 226
P AL + RA LN L H NFR ++++L D + VD +L+D+G
Sbjct: 57 PYALERNRAAGLNGL-----------HVLEGNFRDMRALLN--DAGV--DHVDGVLLDIG 101
Query: 227 MSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHL 286
+SS Q+++ RGFS + PLDMRM Q A D++N +A++ ++ EYGEE +
Sbjct: 102 VSSFQLDDAARGFSYHTEAPLDMRMS-QGGDSAADLVNDMEEADLAAIIFEYGEERHSRR 160
Query: 287 LQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTL 346
+ IV AR +G + +T +L D+I+ PG R I A R FQALRIAVNDEL L
Sbjct: 161 IARGIVNARDKGPISTTTQLADIIKRAYPGGHAR---GIHPARRTFQALRIAVNDELGAL 217
Query: 347 ESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNI 406
L D L PGGRL VISFHSLEDRIVK+ L+ D +
Sbjct: 218 RDGLQGASDLLRPGGRLAVISFHSLEDRIVKRFLLA--------------------DPTL 257
Query: 407 NETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ LTKRPI + +E+ N R RSAKLR +K
Sbjct: 258 DP--------------LTKRPIEAAEDEQARNPRARSAKLRGARK 288
>gi|456012739|gb|EMF46427.1| rRNA small subunit methyltransferase H [Planococcus halocryophilus
Or1]
Length = 312
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 130/338 (38%), Positives = 177/338 (52%), Gaps = 30/338 (8%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
+H V+L E +D + R +VDCTLG AGHS +++ + D D +A+A A
Sbjct: 3 NHTTVLLHETVDGLNV-RPDGIYVDCTLGGAGHSEYLVQQLSDQGHLYCFDQDATAIAHA 61
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+ L LH H NF+ +K L E VD IL DLG+SS Q++
Sbjct: 62 KEKLQEYLHRITFIH-------ANFKFLKEEL----EMRGVEKVDGILYDLGVSSPQLDT 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
PERGFS D PLDMRMD A L A ++N W ++ R+ YGEE + KI A
Sbjct: 111 PERGFSYHNDAPLDMRMDQSAELSAYHVVNEWSFEDLVRIFYRYGEEKFSKQIARKIEAA 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + + +TG+LV+ I+ P R+ G A RVFQA+RIAVNDEL E+SL
Sbjct: 171 RDKQPIETTGQLVECIKDGIPAFARRKGG--HPAKRVFQAIRIAVNDELGAAETSLQDAV 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
LA GGR+ VI+FHSLEDR+ K ++A E N+ + + I
Sbjct: 229 SLLAIGGRISVITFHSLEDRLCKAIL--------KEASSLPELPPNL---PVIPDGMEPI 277
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ K++T++PI PS EE N R RSAKLR+ +KI
Sbjct: 278 L-----KLITRKPILPSEEELEHNNRSRSAKLRIAEKI 310
>gi|336113689|ref|YP_004568456.1| S-adenosyl-methyltransferase MraW [Bacillus coagulans 2-6]
gi|335367119|gb|AEH53070.1| S-adenosyl-methyltransferase MraW [Bacillus coagulans 2-6]
Length = 309
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 127/339 (37%), Positives = 172/339 (50%), Gaps = 35/339 (10%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
+H V+L E +D + +VDCTLG GHS+ +++ L+ D D +A+ A
Sbjct: 3 AHKTVLLKETVDGLHI-KPDGIYVDCTLGGGGHSAYLLKQLTGGHLY-AFDQDETAIQHA 60
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+ AH + NFR++KS L VD IL DLG+SS Q++
Sbjct: 61 KEKF-------AHDQNRITFIKSNFRYLKSELNARGVQ----AVDGILYDLGVSSPQLDT 109
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
PERGFS D PLDMRMD A L A +++N WP ++ R+ YGEE + KI +
Sbjct: 110 PERGFSYQHDAPLDMRMDLDAPLTAYEVVNEWPYEKLVRIFFRYGEEKFSKQIARKIEAS 169
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + + +TGEL DLI+ P R+ G A RVFQA+RIAVNDEL E+SL
Sbjct: 170 RAKKPIETTGELADLIKEAIPAPARRKGG--HPAKRVFQAIRIAVNDELSAFETSLTDAI 227
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
L PGGR+ VI+FHSLEDRI K L+ + I
Sbjct: 228 SLLKPGGRVSVITFHSLEDRICKNI------------------LKEYSSAGDLPHGLPVI 269
Query: 415 IQGWNG--KILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ + K++TK+PI P EE N R RSAKLR+ +K
Sbjct: 270 PKEYEPVLKLITKKPIIPDDEEVGGNNRSRSAKLRIAEK 308
>gi|15604993|ref|NP_219777.1| S-adenosyl-methyltransferase MraW [Chlamydia trachomatis D/UW-3/CX]
gi|76788994|ref|YP_328080.1| S-adenosyl-methyltransferase MraW [Chlamydia trachomatis A/HAR-13]
gi|237804617|ref|YP_002888771.1| S-adenosyl-methyltransferase MraW [Chlamydia trachomatis
B/TZ1A828/OT]
gi|255311073|ref|ZP_05353643.1| S-adenosyl-methyltransferase MraW [Chlamydia trachomatis 6276]
gi|255317374|ref|ZP_05358620.1| S-adenosyl-methyltransferase MraW [Chlamydia trachomatis 6276s]
gi|376282276|ref|YP_005156102.1| S-adenosyl-L-methionine-dependent methyltransferase [Chlamydia
trachomatis A2497]
gi|385239783|ref|YP_005807625.1| S-adenosyl-methyltransferase MraW [Chlamydia trachomatis G/9768]
gi|385240705|ref|YP_005808546.1| S-adenosyl-methyltransferase MraW [Chlamydia trachomatis G/11222]
gi|385242559|ref|YP_005810398.1| S-adenosyl-methyltransferase MraW [Chlamydia trachomatis G/9301]
gi|385243479|ref|YP_005811325.1| MraW [Chlamydia trachomatis D-EC]
gi|385244359|ref|YP_005812203.1| MraW [Chlamydia trachomatis D-LC]
gi|385246169|ref|YP_005814991.1| S-adenosyl-methyltransferase MraW [Chlamydia trachomatis G/11074]
gi|385269947|ref|YP_005813107.1| MraW [Chlamydia trachomatis A2497]
gi|20138894|sp|O84274.1|RSMH_CHLTR RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|88909193|sp|Q3KM90.1|RSMH_CHLTA RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|3328685|gb|AAC67865.1| PBP2B Family methyltransferase [Chlamydia trachomatis D/UW-3/CX]
gi|76167524|gb|AAX50532.1| MraW [Chlamydia trachomatis A/HAR-13]
gi|231272917|emb|CAX09828.1| S-adenosyl-L-methionine-dependent methyltransferase [Chlamydia
trachomatis B/TZ1A828/OT]
gi|296435788|gb|ADH17962.1| S-adenosyl-methyltransferase MraW [Chlamydia trachomatis G/9768]
gi|296436713|gb|ADH18883.1| S-adenosyl-methyltransferase MraW [Chlamydia trachomatis G/11222]
gi|296437648|gb|ADH19809.1| S-adenosyl-methyltransferase MraW [Chlamydia trachomatis G/11074]
gi|297140147|gb|ADH96905.1| S-adenosyl-methyltransferase MraW [Chlamydia trachomatis G/9301]
gi|297748402|gb|ADI50948.1| MraW [Chlamydia trachomatis D-EC]
gi|297749282|gb|ADI51960.1| MraW [Chlamydia trachomatis D-LC]
gi|347975087|gb|AEP35108.1| MraW [Chlamydia trachomatis A2497]
gi|371908306|emb|CAX08934.1| S-adenosyl-L-methionine-dependent methyltransferase [Chlamydia
trachomatis A2497]
gi|438690195|emb|CCP49452.1| 16S rRNA m(4) methyltransferase [Chlamydia trachomatis A/7249]
gi|438691279|emb|CCP48553.1| 16S rRNA m(4) methyltransferase [Chlamydia trachomatis A/5291]
gi|438692652|emb|CCP47654.1| 16S rRNA m(4) methyltransferase [Chlamydia trachomatis A/363]
gi|440525185|emb|CCP50436.1| 16S rRNA m(4) methyltransferase [Chlamydia trachomatis K/SotonK1]
gi|440527861|emb|CCP53345.1| 16S rRNA m(4) methyltransferase [Chlamydia trachomatis D/SotonD5]
gi|440528752|emb|CCP54236.1| 16S rRNA m(4) methyltransferase [Chlamydia trachomatis D/SotonD6]
gi|440532325|emb|CCP57835.1| 16S rRNA m(4) methyltransferase [Chlamydia trachomatis G/SotonG1]
gi|440533219|emb|CCP58729.1| 16S rRNA m(4) methyltransferase [Chlamydia trachomatis Ia/SotonIa1]
gi|440534113|emb|CCP59623.1| 16S rRNA m(4) methyltransferase [Chlamydia trachomatis Ia/SotonIa3]
Length = 300
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 130/337 (38%), Positives = 169/337 (50%), Gaps = 49/337 (14%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HIPV++ E L +F R F D T+GA GH+ A + P ++ + G D D SALA +
Sbjct: 7 HIPVLVKESLSLFRD-RNPVVFCDVTVGAGGHAEAFLTEFPSIERYDGSDRDLSALALSE 65
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
N LL + L+ +F ++D D +L DLG+SSMQ+NN
Sbjct: 66 ---NRLLPFKDRVRLRHASFE-----------EVDTLTSDGTYDGVLADLGVSSMQLNNL 111
Query: 236 ERGFSVLG-DGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS G D PLDMRMD + A ++LNS + E+G + R YGEE W +V
Sbjct: 112 ERGFSFQGEDHPLDMRMDTSRGMTASEVLNSLREEEIGEIFRNYGEEPLWRSAAAAVVHF 171
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + + + +L D V P R R++ I T +FQALRI VN E L+ L + F
Sbjct: 172 RKKKKILTVKDLKDATSGVFPSYRLRKK--IHPLTLIFQALRIYVNQEGAQLKVLLDSAF 229
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
L PGGRL VISF SL+DR VK F E E R +
Sbjct: 230 RWLRPGGRLAVISFCSLDDRPVKWAF-------------REAEARGL------------- 263
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
GKILTK+ I PS EE R+N R RSAKLR +K
Sbjct: 264 -----GKILTKKVIMPSYEETRMNPRSRSAKLRCFEK 295
>gi|254446788|ref|ZP_05060263.1| S-adenosyl-methyltransferase MraW [Verrucomicrobiae bacterium
DG1235]
gi|198256213|gb|EDY80522.1| S-adenosyl-methyltransferase MraW [Verrucomicrobiae bacterium
DG1235]
Length = 305
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 127/337 (37%), Positives = 180/337 (53%), Gaps = 36/337 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+PV+ E L+ + S ++DCT G GH+ ++ A + +D DP+A+A+A
Sbjct: 4 HVPVLAAETLEHLAPSDG-GLYLDCTFGGGGHTELVLEAAN--CTVVALDQDPAAVARA- 59
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
+ L + L+ H NF L Q++E D IL D G+SS Q++
Sbjct: 60 ----AELKERYGDRLRFHRM--NF----ETLDQLEEGPF----DGILFDFGVSSFQLDEV 105
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
+RGFS G+ PLDMRMDP++ + A L + A++ R +R Y EE NW + N I+ AR
Sbjct: 106 DRGFSFRGEAPLDMRMDPESGVSAAQWLATADQADLLRAIRGYAEEKNWRKIVNAILAAR 165
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ L +T +L DLI S TP R R + AT+VFQ +RIA+NDE+ +E L A FD
Sbjct: 166 EKNELSTTTQLADLILSCTPA-RVRFNSKLHPATKVFQGIRIAINDEIGVIERGLPAAFD 224
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L GG L ISFHSLEDR+ K + G E R+ R ++ T
Sbjct: 225 KLKTGGILCAISFHSLEDRVAKVLYRRWA--------GRPEGSRDNRPQDMRVT------ 270
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++L KRPIT S +E +N R RSAKLRV++KI
Sbjct: 271 ---RAELLGKRPITASDKEVAVNPRSRSAKLRVLKKI 304
>gi|42559481|sp|Q8GE08.1|RSMH_HELMO RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|27262272|gb|AAN87417.1| methyltransferase [Heliobacillus mobilis]
Length = 312
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 138/337 (40%), Positives = 186/337 (55%), Gaps = 29/337 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HIPV+L EVL+ R ++D T+G GHS+AI+ IG+D DP ALA AR
Sbjct: 5 HIPVLLEEVLEALQP-RPDGLYLDGTVGGGGHSAAILEKTAGQGRLIGLDQDPRALAAAR 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L + NFR + SV+ ++ + + +D IL+D+G+SS Q++
Sbjct: 64 IKLEKFAD-------QVTLVRSNFRQLGSVVEELGQ---KGKIDGILLDIGVSSHQLDEA 113
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGF+ + PLDMRM+P ++ A ILN +P+ E+ R+L EYGEE + IV R
Sbjct: 114 ERGFTYRAEAPLDMRMNPDGAVTAAQILNEYPEGEIFRILWEYGEERWSKRIAQFIVNRR 173
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
L ST +LVD+I++ P + G A R FQALRIAVNDEL L+ +L A D
Sbjct: 174 TEQPLASTTDLVDVIRAAIPAAARQEGG--HPAKRTFQALRIAVNDELGALQEALPAALD 231
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
LAP GRL VISFHSLEDRIVK F E A+G + +
Sbjct: 232 ALAPSGRLAVISFHSLEDRIVKNFFA-------EQAKGC---------TCPPDMPVCGCG 275
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ KI+T++PIT S EE ++N R +SAKLRV QKI
Sbjct: 276 KKARLKIITRKPITGSEEELKINPRSQSAKLRVAQKI 312
>gi|383312681|ref|YP_005365482.1| 16S rRNA m(4)C1402 methyltransferase [Candidatus Rickettsia
amblyommii str. GAT-30V]
gi|378931341|gb|AFC69850.1| 16S rRNA m(4)C1402 methyltransferase [Candidatus Rickettsia
amblyommii str. GAT-30V]
Length = 307
Score = 191 bits (484), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 127/341 (37%), Positives = 190/341 (55%), Gaps = 42/341 (12%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHI-GVDVDPSALAK 173
SH+PVML E+L+ S + S++DCT GA G+S AI+ + ++ +D DP+ + +
Sbjct: 4 SHVPVMLNEMLEALSP-KDGESYLDCTFGAGGYSKAILES---CNCYVTALDRDPNVIKR 59
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
A + +G+ ++T+ FA +F +K D I++DLG+SSMQ++
Sbjct: 60 AEEIQQN--YGERFDFVETN-FADSFAKLKE-----------KKFDGIVLDLGVSSMQLD 105
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
+RGFS L DGPLDMRM Q L AE+ +N+ + E+ V+ +YG+ES + +IV+
Sbjct: 106 IADRGFSFLHDGPLDMRMSRQG-LSAEEFVNTAEEKELADVIYKYGDESFSRRIAKRIVE 164
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
R + STG+L ++++S G R+G I AT+ FQA+RI VNDEL LE L
Sbjct: 165 YRKTARIDSTGKLAEIVRSSI----GFRKGKIDPATKTFQAIRIYVNDELGELEQFLVNV 220
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE--TWI 411
+ L GRL V+SFHSLEDRIVK F +E++E + +DD + W+
Sbjct: 221 KNILKKDGRLVVVSFHSLEDRIVKNFF-------KENSEKPVVRSKYAKDDMTIDPNKWL 273
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
KI+T + + PS +E LN R RSAKLR + I
Sbjct: 274 ---------KIITNKALAPSDKEVGLNIRARSAKLRAAKAI 305
>gi|166154483|ref|YP_001654601.1| S-adenosyl-methyltransferase MraW [Chlamydia trachomatis 434/Bu]
gi|166155358|ref|YP_001653613.1| 16S rRNA m(4)C1402 methyltransferase [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|301335743|ref|ZP_07223987.1| S-adenosyl-methyltransferase MraW [Chlamydia trachomatis L2tet1]
gi|339625932|ref|YP_004717411.1| S-adenosyl-methyltransferase MraW [Chlamydia trachomatis L2c]
gi|263446017|sp|B0B7I8.1|RSMH_CHLT2 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|263446024|sp|B0BBQ3.1|RSMH_CHLTB RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|165930471|emb|CAP03964.1| S-adenosyl-L-methionine-dependent methyltransferase [Chlamydia
trachomatis 434/Bu]
gi|165931346|emb|CAP06918.1| S-adenosyl-L-methionine-dependent methyltransferase [Chlamydia
trachomatis L2b/UCH-1/proctitis]
gi|339460548|gb|AEJ77051.1| S-adenosyl-methyltransferase MraW [Chlamydia trachomatis L2c]
gi|440526073|emb|CCP51557.1| 16S rRNA m(4) methyltransferase [Chlamydia trachomatis L2b/8200/07]
gi|440535898|emb|CCP61411.1| 16S rRNA m(4) methyltransferase [Chlamydia trachomatis L2b/795]
gi|440536789|emb|CCP62303.1| 16S rRNA m(4) methyltransferase [Chlamydia trachomatis L1/440/LN]
gi|440537680|emb|CCP63194.1| 16S rRNA m(4) methyltransferase [Chlamydia trachomatis L1/1322/p2]
gi|440538570|emb|CCP64084.1| 16S rRNA m(4) methyltransferase [Chlamydia trachomatis L1/115]
gi|440539458|emb|CCP64972.1| 16S rRNA m(4) methyltransferase [Chlamydia trachomatis L1/224]
gi|440540349|emb|CCP65863.1| 16S rRNA m(4) methyltransferase [Chlamydia trachomatis L2/25667R]
gi|440541238|emb|CCP66752.1| 16S rRNA m(4) methyltransferase [Chlamydia trachomatis L3/404/LN]
gi|440542126|emb|CCP67640.1| 16S rRNA m(4) methyltransferase [Chlamydia trachomatis L2b/UCH-2]
gi|440543017|emb|CCP68531.1| 16S rRNA m(4) methyltransferase [Chlamydia trachomatis L2b/Canada2]
gi|440543908|emb|CCP69422.1| 16S rRNA m(4) methyltransferase [Chlamydia trachomatis L2b/LST]
gi|440544798|emb|CCP70312.1| 16S rRNA m(4) methyltransferase [Chlamydia trachomatis L2b/Ams1]
gi|440545688|emb|CCP71202.1| 16S rRNA m(4) methyltransferase [Chlamydia trachomatis L2b/CV204]
gi|440913950|emb|CCP90367.1| 16S rRNA m(4) methyltransferase [Chlamydia trachomatis L2b/Ams2]
gi|440914840|emb|CCP91257.1| 16S rRNA m(4) methyltransferase [Chlamydia trachomatis L2b/Ams3]
gi|440915732|emb|CCP92149.1| 16S rRNA m(4) methyltransferase [Chlamydia trachomatis L2b/Canada1]
gi|440916626|emb|CCP93043.1| 16S rRNA m(4) methyltransferase [Chlamydia trachomatis L2b/Ams4]
gi|440917516|emb|CCP93933.1| 16S rRNA m(4) methyltransferase [Chlamydia trachomatis L2b/Ams5]
Length = 300
Score = 191 bits (484), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 130/337 (38%), Positives = 169/337 (50%), Gaps = 49/337 (14%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HIPV++ E L +F R F D T+GA GH+ A + P ++ + G D D SALA +
Sbjct: 7 HIPVLVKESLSLFRG-RNPVVFCDVTVGAGGHAEAFLTEFPSIERYDGSDRDLSALALSE 65
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
N LL + L+ +F ++D D +L DLG+SSMQ+NN
Sbjct: 66 ---NRLLPFKDRVRLRHASFE-----------EVDTLTSDGTYDGVLADLGVSSMQLNNL 111
Query: 236 ERGFSVLG-DGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS G D PLDMRMD + A ++LNS + E+G + R YGEE W +V
Sbjct: 112 ERGFSFQGEDHPLDMRMDTSRGMTASEVLNSLREEEIGEIFRNYGEEPLWRSAAAAVVHF 171
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + + + +L D V P R R++ I T +FQALRI VN E L+ L + F
Sbjct: 172 RKKKKILTVKDLKDATSGVFPSYRLRKK--IHPLTLIFQALRIYVNQEGAQLKVLLDSAF 229
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
L PGGRL VISF SL+DR VK F E E R +
Sbjct: 230 RWLRPGGRLAVISFCSLDDRPVKWAF-------------REAEARGL------------- 263
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
GKILTK+ I PS EE R+N R RSAKLR +K
Sbjct: 264 -----GKILTKKVIMPSYEETRMNPRSRSAKLRCFEK 295
>gi|289547926|ref|YP_003472914.1| S-adenosyl-methyltransferase MraW [Thermocrinis albus DSM 14484]
gi|289181543|gb|ADC88787.1| S-adenosyl-methyltransferase MraW [Thermocrinis albus DSM 14484]
Length = 290
Score = 191 bits (484), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 133/337 (39%), Positives = 172/337 (51%), Gaps = 51/337 (15%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H PV+L D+ + +VDCT+GA GH+ I+ +P+ + IG+D DP AL A
Sbjct: 5 HFPVLLETATDLLLGNGG-KLYVDCTVGAGGHTRRILEKNPQAYV-IGIDRDPQALKLAE 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
+L + + NF H+ VL Q E + VD L DLGMS MQ+ +
Sbjct: 63 ENLREF-------EGRFSLYHANFVHLDEVLLQ--EGV--EQVDGFLFDLGMSMMQLKSA 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
RGFS D LDMRMDP + A ++N + ++ R+LREYGEE + IV R
Sbjct: 112 -RGFSFQRDEFLDMRMDPSDPITAYHVVNRYSQRDLERILREYGEEPYASRIARAIVLRR 170
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +TGELV ++ SV P RGR I ATRVFQA+RI VN EL+ L+ +L
Sbjct: 171 KEKPIETTGELVQIVLSVVPYRRGR----IHPATRVFQAIRIEVNGELRNLKEALPKTLK 226
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L GGRL VISFHSLEDRIVK F +H+ E
Sbjct: 227 FLRKGGRLVVISFHSLEDRIVKNFFK---EHSHEI------------------------- 258
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
K LTK+PITPS EE N RSAKLR +K+
Sbjct: 259 -----KPLTKKPITPSREEIEKNPPSRSAKLRAGEKV 290
>gi|404329223|ref|ZP_10969671.1| S-adenosyl-methyltransferase MraW [Sporolactobacillus vineae DSM
21990 = SL153]
Length = 317
Score = 191 bits (484), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 131/317 (41%), Positives = 176/317 (55%), Gaps = 32/317 (10%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
+VDCTLG GHS AI+ +L+ D D AL A L L G+ TF
Sbjct: 24 YVDCTLGGGGHSEAIVTRLTSGRLY-AFDQDQEALHAAEKRLE-LYVGKI-------TFI 74
Query: 197 K-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQA 255
K NFR+++ +L +EN+ +G+D +L DLG+SS Q ++ ERGFS DGPLDMRMD
Sbjct: 75 KSNFRYMRQILE--NENV--TGIDGVLFDLGVSSPQFDHAERGFSYQQDGPLDMRMDRDQ 130
Query: 256 SLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTP 315
+L AE I+N WP ++ + YGEE + I R R + STGEL DLI+ P
Sbjct: 131 ALTAEKIVNEWPYDKLVHIFFMYGEEHFSKPIARLIEDRRKRQPIQSTGELSDLIKEAIP 190
Query: 316 GMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRI 375
RR G A RVFQALRIAVNDEL +L+ +LH + L GGRL VI+F SLEDR+
Sbjct: 191 AP-ARRTGG-HPAKRVFQALRIAVNDELGSLDEALHQSLELLNVGGRLSVITFQSLEDRL 248
Query: 376 VKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEE 435
KQ ++ +E E L + + ++ ++++ T++PI PS E
Sbjct: 249 CKQFI-------KKYSEWPELPLGIPQLPDHDQPVLKKV---------TRKPIVPSKSEV 292
Query: 436 RLNCRCRSAKLRVIQKI 452
N R RSAKLRV +KI
Sbjct: 293 DNNRRARSAKLRVAEKI 309
>gi|56964129|ref|YP_175860.1| S-adenosyl-methyltransferase MraW [Bacillus clausii KSM-K16]
gi|115311580|sp|Q5WFG1.1|RSMH_BACSK RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|56910372|dbj|BAD64899.1| S-adenosyl-methyltransferase MraW [Bacillus clausii KSM-K16]
Length = 314
Score = 191 bits (484), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 127/318 (39%), Positives = 168/318 (52%), Gaps = 35/318 (11%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
+VDCTLG GHS I+ A D D +AL+ A L+ + TF
Sbjct: 24 YVDCTLGGGGHSERILTALAGEGHLYAFDQDEAALSFAAEKLSRFK--------ENITFI 75
Query: 197 K-NFRHIKSVLGQ--IDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDP 253
+ NFRHIK L +D+ VD IL DLG+SS Q++ RGFS D PLDMRMD
Sbjct: 76 RSNFRHIKEELRMRGVDK------VDGILFDLGVSSPQLDEASRGFSYHQDAPLDMRMDQ 129
Query: 254 QASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSV 313
ASL A +++N+WP A++ ++ YGEE + KI RL+ + +TGELVD+I+
Sbjct: 130 SASLTAREVVNTWPFAKLHSIISRYGEEKFSKQIARKIEAYRLKQPIETTGELVDIIKEA 189
Query: 314 TPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLED 373
P RR G A R FQA+RIAVNDEL E +L F+ L GGR+ VI+FHSLED
Sbjct: 190 IPAP-ARRAGG-HPAKRTFQAIRIAVNDELGAFEDALTDGFELLNEGGRMAVITFHSLED 247
Query: 374 RIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAE 433
R+ KQ F + + D I Q ++TK+PI + E
Sbjct: 248 RLCKQMF----------------KEKTKLPDLPKGLPIIPADQKAPFALITKKPIVANDE 291
Query: 434 EERLNCRCRSAKLRVIQK 451
E + N R RSAKLR+I+K
Sbjct: 292 EIKANNRARSAKLRIIEK 309
>gi|269795582|ref|YP_003315037.1| S-adenosyl-methyltransferase MraW [Sanguibacter keddieii DSM 10542]
gi|269097767|gb|ACZ22203.1| S-adenosyl-methyltransferase MraW [Sanguibacter keddieii DSM 10542]
Length = 346
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/276 (39%), Positives = 158/276 (57%), Gaps = 22/276 (7%)
Query: 110 QQQQSSHIPVMLGEVLDVFSSSRTITS--FVDCTLGAAGHSSAIIRAHPELKLHIGVDVD 167
++ H+PV+L +++ + + ++ +VDCTLG GH+ AI+ PE+++ IG+D D
Sbjct: 20 RETSDRHLPVLLDRCVELLAPALSVPGAVYVDCTLGMGGHTEAILERLPEVRV-IGIDRD 78
Query: 168 PSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILR---SGVDAILMD 224
P AL A A L F F + +V +I + + +GV ILMD
Sbjct: 79 PQALELAGARLER--------------FGSRFTGVHAVYDEIGDVVAEQGLTGVQGILMD 124
Query: 225 LGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNW 284
LG+SS+Q++ ERGFS D PLDMRMD ASL A D+LN++ + ++ R+LREYGEE
Sbjct: 125 LGVSSLQIDERERGFSYAQDAPLDMRMDSTASLTAADVLNTYSERDLARILREYGEERFA 184
Query: 285 HLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELK 344
+ IV R + +LVDL+++ P R+G A R FQALRI VN EL+
Sbjct: 185 SKIARSIVAKREARPWERSADLVDLVRACIPA--ATRKGTGNPAKRTFQALRIEVNGELE 242
Query: 345 TLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTF 380
LE +L A + LA GGR+ V S+HSLEDR+ K+
Sbjct: 243 VLERALPAAVEALAVGGRIVVESYHSLEDRLTKREL 278
>gi|255101826|ref|ZP_05330803.1| S-adenosyl-methyltransferase [Clostridium difficile QCD-63q42]
gi|255307693|ref|ZP_05351864.1| S-adenosyl-methyltransferase [Clostridium difficile ATCC 43255]
gi|423081337|ref|ZP_17069945.1| S-adenosyl-methyltransferase MraW [Clostridium difficile
002-P50-2011]
gi|423084604|ref|ZP_17073104.1| S-adenosyl-methyltransferase MraW [Clostridium difficile
050-P50-2011]
gi|423092696|ref|ZP_17080500.1| S-adenosyl-methyltransferase MraW [Clostridium difficile
70-100-2010]
gi|357551003|gb|EHJ32807.1| S-adenosyl-methyltransferase MraW [Clostridium difficile
002-P50-2011]
gi|357552174|gb|EHJ33949.1| S-adenosyl-methyltransferase MraW [Clostridium difficile
050-P50-2011]
gi|357553566|gb|EHJ35313.1| S-adenosyl-methyltransferase MraW [Clostridium difficile
70-100-2010]
Length = 311
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 120/339 (35%), Positives = 183/339 (53%), Gaps = 34/339 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E ++ + + +VDCT+G AGHS I++ + L IG D D +A++ A+
Sbjct: 5 HVSVLLNECIENLNI-KPDGVYVDCTMGGAGHSKEIVKKLSDKGLFIGFDQDKNAISTAK 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L+ H NF +IK L E I +D +L DLG+SS Q++
Sbjct: 64 ERLSEYESRVKFVH-------SNFENIKEEL----EKIGVYKIDGVLADLGVSSHQLDEA 112
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
+RGFS + D PLDMRMD + A D++N++ + E+ +++++YGE++ + IV+ R
Sbjct: 113 DRGFSYMQDAPLDMRMDVRCEFSAYDVVNTYTEDELTKIIKDYGEDNWAKRIAKFIVEER 172
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +TGELVD+I+ P + R G A R FQA+RI VN+EL + ++
Sbjct: 173 ANKPIETTGELVDVIKKAIPK-KARIDGP-HPAKRTFQAIRIEVNNELGVITKMINDASS 230
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNI--NETWIRQ 413
+ GGR+ +I+FHSLEDRIVK F +++ D I I Q
Sbjct: 231 IMNEGGRICIITFHSLEDRIVKNAF------------------KHLASDCICPQHLPICQ 272
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ KI+T++PI PS EE +N R RSAKLRV +KI
Sbjct: 273 CDKESEVKIITRKPILPSEEEIEVNPRSRSAKLRVAEKI 311
>gi|390934662|ref|YP_006392167.1| Ribosomal RNA small subunit methyltransferase H
[Thermoanaerobacterium saccharolyticum JW/SL-YS485]
gi|389570163|gb|AFK86568.1| Ribosomal RNA small subunit methyltransferase H
[Thermoanaerobacterium saccharolyticum JW/SL-YS485]
Length = 310
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/351 (35%), Positives = 194/351 (55%), Gaps = 44/351 (12%)
Query: 102 DYDYESIIQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLH 161
D+ +ES++ Q+ ++ + + +VD TLG GHS I+R + KL
Sbjct: 2 DFKHESVLLQETIEYLEIKPDGI------------YVDGTLGGGGHSMEILRRLDKGKL- 48
Query: 162 IGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAI 221
I +D D A+ A L + + H N+++IK +L + G+D
Sbjct: 49 IAIDRDMDAIKAASIRLKDF-NNVTYIH-------DNYKNIKDILKKCG----IEGIDGA 96
Query: 222 LMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEE 281
L+DLG+SS Q++ +RGFS + D PLDMRMD ++ L AE ++N++ + E+ +V+ +YGEE
Sbjct: 97 LLDLGVSSYQLDEAQRGFSYMHDAPLDMRMDKESDLTAEYVVNNYSEDEIAKVISDYGEE 156
Query: 282 SNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVND 341
+ IV+ R R + +T ELVD+I+ P + RR G A R FQA+RI VN+
Sbjct: 157 LWAKRIAKFIVEERRRKPIKTTFELVDIIKKAIPASK-RRTGP-HPAKRTFQAIRIEVNE 214
Query: 342 ELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNI 401
ELK LE ++ D + PGGR+ +I+FHSLEDRIVK T+ + ED +
Sbjct: 215 ELKGLEDAIADFVDVMNPGGRIAIITFHSLEDRIVKNTYKKL-----EDPCTCPK----- 264
Query: 402 RDDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
N+ T ++ + KI+TK+P+ P+ +E ++N R RSAKLRV +K+
Sbjct: 265 ---NLPCTCGKKPVI----KIVTKKPVVPNEDEIKVNPRSRSAKLRVAEKL 308
>gi|405980428|ref|ZP_11038767.1| S-adenosyl-methyltransferase MraW [Actinomyces turicensis
ACS-279-V-Col4]
gi|404390421|gb|EJZ85490.1| S-adenosyl-methyltransferase MraW [Actinomyces turicensis
ACS-279-V-Col4]
Length = 326
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/279 (41%), Positives = 151/279 (54%), Gaps = 23/279 (8%)
Query: 108 IIQQQQSSHIPVMLGEVLDVFSSSRTI--TSFVDCTLGAAGHSSAIIRAHPELKLHIGVD 165
+ +Q HIPV+L E + + S + T VDCTLG GHS A ++ P + L IG+D
Sbjct: 3 LTKQTSERHIPVLLDECMGMMSPALTDDGAVLVDCTLGMGGHSEAALKRFPNIHL-IGID 61
Query: 166 VDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG----VDAI 221
DP A++ A L FA F + + +DE + DAI
Sbjct: 62 RDPQAISLASERLAP--------------FADRFTAVHTTYDHVDEVVATYAPAGKADAI 107
Query: 222 LMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEE 281
LMDLG+SS Q++ ERGFS D PLDMRMDP A ++L S E+ ++LR YGEE
Sbjct: 108 LMDLGVSSFQLDEAERGFSYSADAPLDMRMDPTRGQSAAELLVSATAQEIAQILRVYGEE 167
Query: 282 SNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVND 341
+ +IV+ R L TG+L D++++ P RR G + R FQALRIAVND
Sbjct: 168 RFASRIARRIVETRETQPLTRTGQLADIVRASIPAA-ARRTGG-NPSKRTFQALRIAVND 225
Query: 342 ELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTF 380
EL LE +L ACF L GGRL V S+ SLEDRIVK F
Sbjct: 226 ELNILERALPACFASLRIGGRLVVESYQSLEDRIVKDLF 264
>gi|338814768|ref|ZP_08626754.1| S-adenosyl-methyltransferase MraW [Acetonema longum DSM 6540]
gi|337273327|gb|EGO61978.1| S-adenosyl-methyltransferase MraW [Acetonema longum DSM 6540]
Length = 326
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 125/319 (39%), Positives = 172/319 (53%), Gaps = 36/319 (11%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
+VDCTLG AGH+ AI +G+D DP+A+ AR L ++ + H
Sbjct: 41 YVDCTLGGAGHTLAIAGRLLSQGQLVGIDQDPAAIKAAREKLAAV-------QCRVHIVH 93
Query: 197 KNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQAS 256
NFR + VL + S V+ IL+DLG+SS Q++ ERGFS + DGPLDMRMDP+A
Sbjct: 94 ANFREVDRVLSDLG----LSKVNGILLDLGVSSYQLDTAERGFSYMQDGPLDMRMDPEAR 149
Query: 257 LKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPG 316
+ A ++N++ +A++ RV+ EYGEE + IV R R + +TGELV +I+ P
Sbjct: 150 VSAYQVVNNYSEADLARVIHEYGEERWAKRIAQFIVVERDRQPIGTTGELVQVIKRAIPS 209
Query: 317 MRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIV 376
R++G A R FQA+RI VN EL+ L L D L GGRL I+FHSLEDRIV
Sbjct: 210 A-ARKEG-PHPAKRTFQAIRIEVNRELEVLRQVLEKSVDLLTTGGRLCAITFHSLEDRIV 267
Query: 377 KQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTK---RPITPSAE 433
KQT ++N+ + N K L K R ++P+A+
Sbjct: 268 KQT------------------IQNLAKPCTCPPHFPICV--CNRKPLVKAIGRALSPAAD 307
Query: 434 EERLNCRCRSAKLRVIQKI 452
E N R RSAKLRV +K+
Sbjct: 308 EIENNPRSRSAKLRVAEKL 326
>gi|118444716|ref|YP_878007.1| S-adenosyl-methyltransferase MraW [Clostridium novyi NT]
gi|263446115|sp|A0Q055.1|RSMH_CLONN RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|118135172|gb|ABK62216.1| S-adenosyl-methyltransferase MraW [Clostridium novyi NT]
Length = 309
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 121/342 (35%), Positives = 189/342 (55%), Gaps = 40/342 (11%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
+H+PV+L E +D + +VDCTLG AGHSS I++ + IG+D D +A+ A
Sbjct: 4 NHVPVLLEETIDSLNIKED-GIYVDCTLGGAGHSSEILKKLSKKGRLIGIDQDINAIKAA 62
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+ L + H NF ++ S+L +++ + VD ILMDLG+SS Q++
Sbjct: 63 KERLKDY-ENVTYVH-------NNFYNLASILDELNVD----KVDGILMDLGVSSYQLDT 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
PERGFS + D LDMRM+ + + A D++N + + ++ R++++YGEE + IV+
Sbjct: 111 PERGFSYMKDAMLDMRMNTENGISAYDVVNGYSEDDLFRIIKDYGEERFSRKIAKAIVKE 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +T ELV +I+ V P M+ ++ G A + FQA+RI VN EL+ L ++
Sbjct: 171 RNEKPVETTLELVKIIKDVIP-MKFQQGGH--PAKKTFQAIRIEVNHELEILNKTVEDGV 227
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRN----IRDDNINETW 410
+ L P GR+ VI+FHSLEDRI+K F +EL N ++ I
Sbjct: 228 NYLNPNGRISVITFHSLEDRIIKTKF---------------KELENPCTCPKEFPICVCG 272
Query: 411 IRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ ++ K++T++PI P+ E N R RS+KLRV QKI
Sbjct: 273 KKPVV-----KVVTRKPIEPNEFERENNSRSRSSKLRVAQKI 309
>gi|357050518|ref|ZP_09111716.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
saccharolyticus 30_1]
gi|355381171|gb|EHG28298.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
saccharolyticus 30_1]
Length = 319
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 126/340 (37%), Positives = 177/340 (52%), Gaps = 34/340 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H VML E +D + R +VDCTLG AGHS ++ E D D A+ A+
Sbjct: 6 HYTVMLKETVDGLAI-RPDGIYVDCTLGGAGHSEYLLSQLSEEGHLYAFDQDQKAIDHAK 64
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVD---AILMDLGMSSMQV 232
L S + +K+ NFR++K L Q GVD +L DLG+SS Q+
Sbjct: 65 ERLASYVAKGMVTFIKS-----NFRYLKEALQQ-------QGVDQVSGVLYDLGVSSPQL 112
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ ERGFS D PLDMRMD A+L A +++N + ++ ++ YGEE + +I
Sbjct: 113 DEAERGFSYHQDAPLDMRMDQSAALTAYEVVNQFDYQQLVKIFFRYGEEKFSKQIAREIE 172
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
+ R + +TGELV++I++ P R+ G A R+FQA+RIAVNDEL +E SL
Sbjct: 173 RTRANKPIETTGELVEIIKTAIPAPARRKGGH--PAKRIFQAIRIAVNDELGVIEESLEQ 230
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
D L GR+ VI+FHSLEDRIVK TF + +D I
Sbjct: 231 AIDLLEKNGRISVITFHSLEDRIVKSTFKA---------------YSTPKDVPPGLPIIP 275
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ Q K++T++P+ PS EE N R RSAKLR+ +K+
Sbjct: 276 EEFQPVL-KLITRKPLLPSEEEVSENNRSRSAKLRIAEKM 314
>gi|237802695|ref|YP_002887889.1| S-adenosyl-methyltransferase MraW [Chlamydia trachomatis
B/Jali20/OT]
gi|231273929|emb|CAX10721.1| S-adenosyl-L-methionine-dependent methyltransferase [Chlamydia
trachomatis B/Jali20/OT]
Length = 300
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 130/337 (38%), Positives = 169/337 (50%), Gaps = 49/337 (14%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HIPV++ E L +F R F D T+GA GH+ A + P ++ + G D D SALA +
Sbjct: 7 HIPVLVKESLSLFRD-RNPVVFCDVTVGAGGHAEAFLTEFPSIERYDGSDRDLSALALSE 65
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
N LL + L+ +F ++D D +L DLG+SSMQ+NN
Sbjct: 66 ---NRLLPFKDRVRLRHASFE-----------EVDTLTSDGTYDGVLADLGVSSMQLNNL 111
Query: 236 ERGFSVLG-DGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS G D PLDMRMD + A ++LNS + E+G + R YGEE W +V
Sbjct: 112 ERGFSFQGEDHPLDMRMDTSRGMTASEVLNSLREEEIGEIFRNYGEEPLWRSAAAAVVHF 171
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + + + +L D V P R R++ I T +FQALRI VN E L+ L + F
Sbjct: 172 RKKKKILTVKDLKDATSGVFPSYRLRKK--IHPLTLIFQALRIYVNQEGAQLKVLLDSSF 229
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
L PGGRL VISF SL+DR VK F E E R +
Sbjct: 230 RWLRPGGRLAVISFCSLDDRPVKWAF-------------REAEARGL------------- 263
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
GKILTK+ I PS EE R+N R RSAKLR +K
Sbjct: 264 -----GKILTKKVIMPSYEETRMNPRSRSAKLRCFEK 295
>gi|406991864|gb|EKE11313.1| Ribosomal RNA small subunit methyltransferase H [uncultured
bacterium]
Length = 308
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 126/337 (37%), Positives = 181/337 (53%), Gaps = 30/337 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E ++ + R + VD TLG GHS+ I++ + I +D D A+ +
Sbjct: 2 HKSVLLDESIEGLNI-RQGSIVVDATLGGGGHSNRILQIIGKKGKLIAIDQDLEAIENFK 60
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
G+ ++ + NF ++K++L +++ VDAIL DLG SS+Q+ +
Sbjct: 61 KQ-----SGEDRSNV--YCVKDNFSNLKNILQELEIEF----VDAILADLGYSSIQLEDA 109
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
RG S L D PLDMR+D Q LKA DI+N++ E+ R+L++YGEE ++ KI R
Sbjct: 110 SRGMSFLADAPLDMRLDRQKELKAGDIVNNYSQGEIKRILKDYGEERFAGIIAKKIADHR 169
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +TGELV++I+ P + + G I AT+ FQALRI +N EL+ LE + D
Sbjct: 170 KIKEIETTGELVEIIRQAVP--QKHQHGKIHVATKTFQALRIEINRELEVLEEFIPCAMD 227
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L GRL +ISFHSLEDRIVK F R++A G + I Q
Sbjct: 228 SLKKTGRLAIISFHSLEDRIVKNIF-------RKNARGC---------ICPPDFPICQCG 271
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
Q KI+TK+PI P E N R RSAKLR+ +KI
Sbjct: 272 QAAKVKIITKKPIVPGEMEVSENPRARSAKLRICEKI 308
>gi|257867494|ref|ZP_05647147.1| methyltransferase [Enterococcus casseliflavus EC30]
gi|257873823|ref|ZP_05653476.1| methyltransferase [Enterococcus casseliflavus EC10]
gi|257877573|ref|ZP_05657226.1| methyltransferase [Enterococcus casseliflavus EC20]
gi|257801550|gb|EEV30480.1| methyltransferase [Enterococcus casseliflavus EC30]
gi|257807987|gb|EEV36809.1| methyltransferase [Enterococcus casseliflavus EC10]
gi|257811739|gb|EEV40559.1| methyltransferase [Enterococcus casseliflavus EC20]
Length = 319
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 128/337 (37%), Positives = 177/337 (52%), Gaps = 28/337 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H VML E +D R +VDCTLG AGHS ++ E D D +A+ A+
Sbjct: 6 HYTVMLQETVDGLKI-RPEGVYVDCTLGGAGHSEYLLSQLSEEGHLFAFDQDQTAIDHAK 64
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L + +K+ NFR++K L Q + R VD IL DLG+SS Q++
Sbjct: 65 ERLAPYVAKGMVTFIKS-----NFRYLKEALHQ--HGVSR--VDGILYDLGVSSPQLDEA 115
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD A+L A +++N + ++ ++ YGEE + +I + R
Sbjct: 116 ERGFSYHQDAPLDMRMDQTAALTAYEVVNQFDYHQLVKIFFRYGEEKFSKQIAREIERVR 175
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +TGELVD+I++ P R+ G A RVFQA+RIAVNDEL +E SL
Sbjct: 176 QDHPIETTGELVDIIKTAIPAPARRKGGH--PAKRVFQAIRIAVNDELGVIEESLEQAIH 233
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
LA GR+ VI+FHSLEDRIVK F +E +D I +
Sbjct: 234 LLAVNGRVSVITFHSLEDRIVKSMF---------------KEYSTPKDMPPGLPMIPEEF 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
Q K++T++P+ P+ EE N R RSAKLR+ +KI
Sbjct: 279 QP-TLKLITRKPLLPTEEEVAENNRSRSAKLRIAEKI 314
>gi|452824156|gb|EME31161.1| S-adenosyl-methyltransferase [Galdieria sulphuraria]
Length = 329
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 128/345 (37%), Positives = 182/345 (52%), Gaps = 52/345 (15%)
Query: 111 QQQSSHIPVMLGEVLD-VFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLH---IGVDV 166
++++ H+PV+L EV++ ++ FVDCT+GA GH I+ EL + I +D
Sbjct: 21 RERNLHVPVLLQEVIENAVQANVAGKVFVDCTVGAGGHCQKIM----ELGIFSRCIAIDK 76
Query: 167 DPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLG 226
D + + ++L H +FAK I +L Q E + V IL DLG
Sbjct: 77 DENC--RKFLEESNLTHS---VRFVQGSFAK----IVEILTQ--EKVTSQDVGFILADLG 125
Query: 227 MSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHL 286
+SSMQ++N RGFS DGPLDMRMD S A ++N + +G ++RE GEE W
Sbjct: 126 VSSMQLDNASRGFSFSHDGPLDMRMDLSQSTTAWQVVNQSSEEALGNIIRELGEERKWKR 185
Query: 287 LQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTL 346
+ IV+ R R +++T +L +++ + R+ I AT FQ+LR+ VN EL L
Sbjct: 186 VAAAIVKERQRNPINTTCQLANIVCNAKKERARYRK--IHPATLTFQSLRLFVNSELNEL 243
Query: 347 ESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNI 406
+ + CL P GRL +ISFHSLEDRIVKQTF +E AE +E
Sbjct: 244 NTFIPMALSCLGPVGRLAIISFHSLEDRIVKQTF-------KEYAEKSE----------- 285
Query: 407 NETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ILTK+PI PS EE +N RCRSAK+RVI++
Sbjct: 286 -------------FRILTKKPIVPSEEEREVNIRCRSAKMRVIER 317
>gi|218961102|ref|YP_001740877.1| S-adenosyl-methyltransferase MraW [Candidatus Cloacamonas
acidaminovorans]
gi|167729759|emb|CAO80671.1| S-adenosyl-methyltransferase MraW [Candidatus Cloacamonas
acidaminovorans str. Evry]
Length = 327
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 128/337 (37%), Positives = 182/337 (54%), Gaps = 35/337 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H PVM+ E L + + R +VD T G GHS A+++A PE+KL+ D D A+ +A
Sbjct: 4 HTPVMVKECLS-YLNLRAGYIYVDATTGGGGHSLAMLKAQPEIKLYC-FDQDSEAIEEA- 60
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
+LH + L NF+ +++ L G+D IL DLG+SS Q+
Sbjct: 61 ---GKILHNYNNVEL----IQANFKQLRTELAYRK----IKGIDGILFDLGVSSHQLECT 109
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD A + +N + + REYGEE N + + I ++
Sbjct: 110 ERGFSFEKDAPLDMRMDKNLKNSAYNAVNELDTKTLTNIFREYGEEQNAYRIAKAIEKSS 169
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +T EL +++S+ +G + +KT RVFQALRI VN EL++L +L +
Sbjct: 170 --KPIKTTRELAKIVESI--AGKGTK-ASLKTKVRVFQALRIYVNKELESLSLALQDAIN 224
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L P GR+ VIS+HSLEDRIVKQTF + AE EE + + N N +Q+I
Sbjct: 225 LLNPQGRIVVISYHSLEDRIVKQTF--------KKAEQKNEEQSVLPNSNKNHQ--QQLI 274
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
ILTK+P+T + EE +N R RSAKLR +K+
Sbjct: 275 ------ILTKKPVTATEEEILVNPRSRSAKLRAGEKV 305
>gi|167037220|ref|YP_001664798.1| S-adenosyl-methyltransferase MraW [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320115639|ref|YP_004185798.1| S-adenosyl-methyltransferase MraW [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|262825860|sp|B0K8J9.1|RSMH_THEP3 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|166856054|gb|ABY94462.1| S-adenosyl-methyltransferase MraW [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|319928730|gb|ADV79415.1| S-adenosyl-methyltransferase MraW [Thermoanaerobacter brockii
subsp. finnii Ako-1]
Length = 308
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 125/342 (36%), Positives = 189/342 (55%), Gaps = 37/342 (10%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
+ SH V+L E ++ + + + +VD TLG GHS I++ KL I +D D A+
Sbjct: 2 EYSHKSVLLKETIE-YLNIKPEGIYVDGTLGGGGHSEEILKRLTTGKL-IAIDRDLDAIK 59
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
++ L + + + NF++IK +L + NI VD IL+DLG+SS Q+
Sbjct: 60 ASKERLKNYKNAE--------YINDNFKNIKEILKSL--NI--DKVDGILLDLGVSSYQL 107
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+RGFS + D P+DMRMD + A D++N + E+ RV+REYGEE + IV
Sbjct: 108 EEVKRGFSYMKDAPMDMRMDKNSPFSAYDVVNKYSQQELERVIREYGEEKWASRIAKFIV 167
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
+ R +G + +T +LV++I++ P RR+G A R FQA+RI VN+ELK L+ ++
Sbjct: 168 KEREKGEIKTTFQLVEIIKNAVPA-SARREGP-HPAKRTFQAIRIEVNEELKGLDKAIED 225
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRN--IRDDNINETW 410
+ L GR+ +I+FHSLEDRIVK TF ++L N N+ T
Sbjct: 226 MVEVLRGKGRIAIITFHSLEDRIVKNTF---------------KKLENPCTCPPNMPCTC 270
Query: 411 IRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++ + KI+TK+P+ PS EE N R RSAKLRV +K+
Sbjct: 271 GKKPVV----KIITKKPVLPSKEEIETNSRSRSAKLRVAEKL 308
>gi|379727697|ref|YP_005319882.1| rRNA small subunit methyltransferase H [Melissococcus plutonius
DAT561]
gi|376318600|dbj|BAL62387.1| rRNA small subunit methyltransferase H [Melissococcus plutonius
DAT561]
Length = 316
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 128/320 (40%), Positives = 174/320 (54%), Gaps = 35/320 (10%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGV-DVDPSALAKARAHLNSLLHGQAHPHLKTHTF 195
+VDCTLG GHS ++ E K H+ V D D AL A L + Q +K
Sbjct: 27 YVDCTLGGGGHSQYLLSKLSE-KGHLYVFDQDEMALTAASKRLAPYVEKQMVTFIKA--- 82
Query: 196 AKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQA 255
NFR +K L ++++ + VD I DLG+SS Q++ +RGFS D PLDMRMD +
Sbjct: 83 --NFRLLKEKL--FEKHVFQ--VDGIFYDLGVSSPQLDEAKRGFSYHHDAPLDMRMDQTS 136
Query: 256 SLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTP 315
SL A +I+N + + +V YGEE + +I + RL + +TGELV++I+ V P
Sbjct: 137 SLTAYEIVNHYSYENLVKVFFRYGEEKFSKQIAREIERVRLNQTIQTTGELVEIIKKVIP 196
Query: 316 GMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRI 375
RR G A R+FQA+RIAVNDEL +E SL + L GR+GVI+FHSLEDRI
Sbjct: 197 A-PARRTGG-HPAKRIFQAIRIAVNDELGAIEVSLEQAIELLNKNGRIGVITFHSLEDRI 254
Query: 376 VKQTFLSIIDHNREDAEG---NEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSA 432
VK F S ++ G EE + I K++TK+PI PS
Sbjct: 255 VKNMFKS-YSTPKDLPPGLPVVPEEYQPIL------------------KVITKKPIIPSE 295
Query: 433 EEERLNCRCRSAKLRVIQKI 452
EE++ N R RSAKLR+ +KI
Sbjct: 296 EEQKQNNRSRSAKLRIAEKI 315
>gi|325283143|ref|YP_004255684.1| Ribosomal RNA small subunit methyltransferase H [Deinococcus
proteolyticus MRP]
gi|324314952|gb|ADY26067.1| Ribosomal RNA small subunit methyltransferase H [Deinococcus
proteolyticus MRP]
Length = 299
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 136/350 (38%), Positives = 180/350 (51%), Gaps = 63/350 (18%)
Query: 106 ESIIQQQQSSHIPVMLGEVLDVFSSS--RTITSFVDCTLGAAGHSSAIIRAHPELKLHIG 163
E++ SH+PV+ EV+D + + R I VD TLG AGH+ ++ + IG
Sbjct: 4 EAVPHTPTLSHLPVLPQEVMDALAPAPGRLI---VDGTLGGAGHTRMLLERGATV---IG 57
Query: 164 VDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILM 223
+D DP AL++ A + L T NFR ++++L I + VD IL+
Sbjct: 58 IDQDPYALSRVEAEGLAGLR----------TVRGNFRDMQTLLAGIGV----TQVDGILL 103
Query: 224 DLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESN 283
D+G+SS Q+++ ERGFS + LDMRM Q+ A D++N +AE+ ++ EYGEE +
Sbjct: 104 DIGVSSFQLDDVERGFSYHSEAALDMRMS-QSGPSAADLVNDLEEAELAALIYEYGEEKH 162
Query: 284 WHLLQNKIVQARLRGGLHSTGELVDLIQSVTPG-MRGRRQGWIKTATRVFQALRIAVNDE 342
L IV AR + +T EL D+I+ PG +RG I A R FQALRIAVNDE
Sbjct: 163 SRRLARAIVAARQSAPIETTTELADIIKRAYPGFVRG-----IHPARRTFQALRIAVNDE 217
Query: 343 LKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIR 402
L L L A LAPGGRLGVISFHSLEDRIVK+ L E LR
Sbjct: 218 LGALREGLQAAEALLAPGGRLGVISFHSLEDRIVKRFLL------------GSERLRP-- 263
Query: 403 DDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
LTKRP S EE+ N R RSAKLR + +
Sbjct: 264 --------------------LTKRPAVASEEEQAANPRSRSAKLRSAEAV 293
>gi|398813799|ref|ZP_10572490.1| S-adenosyl-methyltransferase MraW [Brevibacillus sp. BC25]
gi|398037852|gb|EJL31029.1| S-adenosyl-methyltransferase MraW [Brevibacillus sp. BC25]
Length = 311
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 136/337 (40%), Positives = 183/337 (54%), Gaps = 30/337 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V++ E + + R +VDCTLG AGHSS I E I +D D AL AR
Sbjct: 5 HVTVLMDEAVQGLNI-RPGGIYVDCTLGGAGHSSLIASKLTEGGRLIAIDQDDWALDNAR 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L S + + NFRHIK ++ ++ SGVD IL DLG+SS Q++
Sbjct: 64 ERLASYMD-------RVTLVKSNFRHIKDIVS----DLGLSGVDGILFDLGVSSPQLDEG 112
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD QASL A DI+N W + E+ +++ YGEE + +IVQ R
Sbjct: 113 ERGFSYNADAPLDMRMDQQASLSAYDIINEWEEEEIAKIIWLYGEEKFSRRIARQIVQQR 172
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +TGELV+LI+ P RR G A R FQA+RIAVNDEL + ++
Sbjct: 173 KKQPIQTTGELVELIKEGIPAA-ARRTGP-HPAKRTFQAIRIAVNDELDAFKEAVVDAIT 230
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L P GR+ VI+FHSLEDRI KQ + ++ ++G N+ +
Sbjct: 231 VLNPEGRVSVITFHSLEDRICKQIY-------QDFSKGCTCPPAFPICTCGNKAVV---- 279
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
K++TK+PI PS EE N R RSAKLRV +K+
Sbjct: 280 -----KVITKKPILPSEEELEANKRARSAKLRVAEKL 311
>gi|313888490|ref|ZP_07822157.1| S-adenosyl-methyltransferase MraW [Peptoniphilus harei
ACS-146-V-Sch2b]
gi|312845519|gb|EFR32913.1| S-adenosyl-methyltransferase MraW [Peptoniphilus harei
ACS-146-V-Sch2b]
Length = 312
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 124/342 (36%), Positives = 183/342 (53%), Gaps = 35/342 (10%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
+ +H V+L E ++ + R ++D TLG AGHS I++ L IG+D D AL
Sbjct: 2 EFAHKSVLLDETIEGLNI-REGKIYLDGTLGGAGHSREILKKLKGTGLLIGIDQDIEALE 60
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
A+ L++ + F N+ + + L ++ + +D +L+D+G+SS Q
Sbjct: 61 VAKERLSN--------YKNVEFFNLNYINFEKALDELGID----KIDGVLLDIGVSSYQF 108
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+NPERGFS D PLDMRMD + + A DI+N++ ++E+ R+++EYGEE + IV
Sbjct: 109 DNPERGFSYRFDAPLDMRMDQELEISARDIVNTYSESEITRIIKEYGEEKWAARIAKFIV 168
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
R + +T ELV++I++ P RR G A R FQALRI VN EL LE S+
Sbjct: 169 DERKTKNIETTFELVEIIKNAIPA-SARRNGP-HPAKRTFQALRIEVNRELDVLEDSIER 226
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNI--NETW 410
L PGGR+ +I+FHSLEDRIVK F + + D I +
Sbjct: 227 FVHRLNPGGRIAIITFHSLEDRIVKNAF------------------KYLEKDCICPPSSP 268
Query: 411 IRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
I + KILT++PIT S EE + N R SAKLR+ +K+
Sbjct: 269 ICTCDKKKEIKILTRKPITASEEELKENKRSHSAKLRIAEKL 310
>gi|389694273|ref|ZP_10182367.1| S-adenosyl-methyltransferase MraW [Microvirga sp. WSM3557]
gi|388587659|gb|EIM27952.1| S-adenosyl-methyltransferase MraW [Microvirga sp. WSM3557]
Length = 349
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 129/340 (37%), Positives = 177/340 (52%), Gaps = 44/340 (12%)
Query: 114 SSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAK 173
S H+PV+L EV R T F+D T GA G++ AI+ HP+ K+ + +D DP A+A
Sbjct: 17 SRHVPVLLEEVCTALDVKRGGT-FIDGTFGAGGYTRAILDGHPQNKV-VAIDRDPDAIAG 74
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG---VDAILMDLGMSSM 230
A L + F K + G +D+ G VD +++D+G+SSM
Sbjct: 75 G-ASLAA-------------KFKKRLMLVPGRFGDLDDVAREQGFESVDGVVLDIGVSSM 120
Query: 231 QVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNK 290
Q++ ERGFS +GPLDMRM+ Q+ A D++N +AE+ + YGEE +
Sbjct: 121 QLDQAERGFSFRNEGPLDMRME-QSGPSAADLVNESSEAELADIFYHYGEERRARAVARA 179
Query: 291 IVQARLRGGLHSTGELVDLIQSVTPGMRGRRQ--GWIKTATRVFQALRIAVNDELKTLES 348
I++ R R +T +L DL+ S+ RQ G I ATRVFQ LRIAVNDEL L
Sbjct: 180 IIEMRRRQPFETTRQLADLVASLI------RQEPGGIHPATRVFQGLRIAVNDELGELVR 233
Query: 349 SLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE 408
+LHA L PGGRL V++FHSLEDRIVKQ F + A G+ R++ E
Sbjct: 234 ALHAAERILTPGGRLVVVTFHSLEDRIVKQFFAA---RTGRAATGS----RHLPTAAAPE 286
Query: 409 TWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRV 448
+ +G P+ PS +E N R RSAKLR
Sbjct: 287 PTFDAVTRG---------PVGPSEQEMARNPRARSAKLRA 317
>gi|341584040|ref|YP_004764531.1| 16S rRNA m(4)C1402 methyltransferase [Rickettsia heilongjiangensis
054]
gi|340808265|gb|AEK74853.1| 16S rRNA m(4)C1402 methyltranserfase [Rickettsia heilongjiangensis
054]
Length = 307
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 126/341 (36%), Positives = 189/341 (55%), Gaps = 42/341 (12%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHI-GVDVDPSALAK 173
SH+PVML E+L+ S + S++DCT GA G+S AI+ + ++ +D DP+ + +
Sbjct: 4 SHVPVMLNEMLEALSP-KDGESYLDCTFGAGGYSKAILES---CNCYVTALDRDPNVIKR 59
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
A + +G+ ++T+ FA +F +K D I++DLG+SSMQ++
Sbjct: 60 AEEIQQN--YGERFDFVETN-FADSFAKLKE-----------KKFDGIVLDLGVSSMQLD 105
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
+RGFS L DGPLDMRM Q L AE+ +N+ + E+ V+ +YG+E + +IV+
Sbjct: 106 IADRGFSFLHDGPLDMRMSGQG-LSAEEFVNTAEEKELADVIYKYGDERFSRRIAKRIVE 164
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
R + STG+L ++++S G R+G I AT+ FQA+RI VNDEL LE L
Sbjct: 165 YRKTASIDSTGKLAEIVRSSI----GFRKGKIDPATKTFQAIRIYVNDELGELEQFLVNV 220
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE--TWI 411
+ L GRL V+SFHSLEDRIVK F +E++E + +DD + W+
Sbjct: 221 KNILKKDGRLVVVSFHSLEDRIVKNFF-------KENSEKPVVRSKYAKDDMTIDPNKWL 273
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
KI+T + + PS +E LN R RSAKLR + I
Sbjct: 274 ---------KIITNKALAPSDKEVGLNIRARSAKLRAAKAI 305
>gi|393201831|ref|YP_006463673.1| S-adenosylmethionine-dependent methyltransferase [Solibacillus
silvestris StLB046]
gi|406664706|ref|ZP_11072481.1| Ribosomal RNA small subunit methyltransferase H [Bacillus
isronensis B3W22]
gi|327441162|dbj|BAK17527.1| predicted S-adenosylmethionine-dependent methyltransferase
[Solibacillus silvestris StLB046]
gi|405387554|gb|EKB46978.1| Ribosomal RNA small subunit methyltransferase H [Bacillus
isronensis B3W22]
Length = 316
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/337 (38%), Positives = 179/337 (53%), Gaps = 30/337 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + + +VDCTLG AGHS +++ E I D D +A+ A+
Sbjct: 4 HTTVLLKETVDGLNINPD-GIYVDCTLGGAGHSEYLVQQLSEKGRLICFDQDTTAIENAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L L H NFR++K L ++ NI + +D IL DLG+SS Q++ P
Sbjct: 63 VRLADYLDRVIFVH-------SNFRYLKEELHKL--NIHQ--IDGILYDLGVSSPQLDTP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD A L A ++N W + R+ YGEE + KI QAR
Sbjct: 112 ERGFSYHHDAPLDMRMDQTAELSAYHVVNEWSYENLVRIFFRYGEEKFSKQVARKIEQAR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +TG+LV+LI+ P R+ G A R+FQA+RIAVNDEL E SL D
Sbjct: 172 EIAPVETTGQLVELIKDGIPAPARRKGG--HPAKRIFQAIRIAVNDELGAAEDSLVDAID 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L GGR+ VI+FHSLEDR+ K F +E ++ D I + +
Sbjct: 230 LLKIGGRISVITFHSLEDRLTKTLF---------------KEASSLPDLPPGLPVIPEHM 274
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ K+++++PI PS EE N R RSAKLR+ +KI
Sbjct: 275 KPIL-KLVSRKPILPSDEELAANNRSRSAKLRIAEKI 310
>gi|258511253|ref|YP_003184687.1| S-adenosyl-methyltransferase MraW [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257477979|gb|ACV58298.1| S-adenosyl-methyltransferase MraW [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 316
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 124/342 (36%), Positives = 183/342 (53%), Gaps = 38/342 (11%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAII-RAHPELKLHIGVDVDPSALAK 173
+H V+L E ++ + +VD TLG GH++ ++ R+ P+ + I D D +A+A
Sbjct: 4 AHETVLLEEAVEALRP-QPGGVYVDATLGGGGHTARLLERSVPDGAV-IAFDQDETAIA- 60
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGV---DAILMDLGMSSM 230
H + +K+ +++E + GV D +L DLG+SS
Sbjct: 61 -------------HAEPLKRQYPGRLTLVKANFAEMEERLRALGVTAVDGVLFDLGVSSP 107
Query: 231 QVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNK 290
Q + PERGFS +GPLDMRMD L A +I+N W + E+ R++REYGEE +
Sbjct: 108 QFDLPERGFSYWHEGPLDMRMDRHQPLTAREIVNEWDEQELARIIREYGEERFATAIARA 167
Query: 291 IVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSL 350
I +AR + + +T EL ++++S P RR G A R FQA+RIAVNDEL LE +
Sbjct: 168 ITRARSKKPIETTTELAEIVKSAIPAA-ARRSG-PHPARRTFQAIRIAVNDELGALERGM 225
Query: 351 HACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETW 410
A F L PGGRL VI+FHSLEDR VK+ F + A+G E
Sbjct: 226 EAAFRALRPGGRLSVITFHSLEDRAVKRLFQTW-------AQGC---------ICPPEFP 269
Query: 411 IRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ Q + G++++++P+TPS+EE N R RSAKLR +K+
Sbjct: 270 VCQCGRKPLGRMVSRKPVTPSSEELERNPRARSAKLRAFEKL 311
>gi|126700272|ref|YP_001089169.1| 16S rRNA m(4)C1402 methyltransferase [Clostridium difficile 630]
gi|123174036|sp|Q182Z2.1|RSMH_CLOD6 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|115251709|emb|CAJ69544.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Clostridium difficile 630]
Length = 311
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/339 (35%), Positives = 183/339 (53%), Gaps = 34/339 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E ++ + + +VDCT+G AGHS I++ + L IG D D +A++ A+
Sbjct: 5 HVSVLLNECIENLNI-KPDGVYVDCTMGGAGHSKEIVKKLSDKGLFIGFDQDKNAISTAK 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L+ H NF +IK L E I +D +L DLG+SS Q++
Sbjct: 64 ERLSEYESRVKFVH-------SNFENIKEEL----EKIGVYKIDGVLADLGVSSHQLDEA 112
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
+RGFS + D PLDMRMD + A D++N++ + E+ +++++YGE++ + IV+ R
Sbjct: 113 DRGFSYMQDAPLDMRMDVRCEFSAYDVVNTYTEDELTKIIKDYGEDNWAKRIAKFIVEER 172
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +TGELVD+I+ P + R G A R FQA+RI VN+EL + ++
Sbjct: 173 ANKPIETTGELVDVIKKAIPK-KARIVGP-HPAKRTFQAIRIEVNNELGVITKMINDASS 230
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNI--NETWIRQ 413
+ GGR+ +I+FHSLEDRIVK F +++ D I I Q
Sbjct: 231 IMNEGGRICIITFHSLEDRIVKNAF------------------KHLASDCICPQHLPICQ 272
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ KI+T++PI PS EE +N R RSAKLRV +KI
Sbjct: 273 CDKESEVKIITRKPILPSEEEIEVNPRSRSAKLRVAEKI 311
>gi|229552071|ref|ZP_04440796.1| S-adenosyl-methyltransferase [Lactobacillus rhamnosus LMS2-1]
gi|385835134|ref|YP_005872908.1| S-adenosyl-methyltransferase MraW [Lactobacillus rhamnosus ATCC
8530]
gi|229314504|gb|EEN80477.1| S-adenosyl-methyltransferase [Lactobacillus rhamnosus LMS2-1]
gi|355394625|gb|AER64055.1| S-adenosyl-methyltransferase MraW [Lactobacillus rhamnosus ATCC
8530]
Length = 313
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/317 (38%), Positives = 177/317 (55%), Gaps = 30/317 (9%)
Query: 136 SFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTF 195
++VD TLG GH+ I+ +L I D D +A+A + H +L P L
Sbjct: 25 TYVDATLGRGGHTRQILNQLTNGRL-IAFDQDEAAIAAVKRHFGTL-----PPQLTL--V 76
Query: 196 AKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQA 255
+NFR + + L +D +R VD +L DLG+SS Q ++ +RGFS D PLDMRMD +
Sbjct: 77 HRNFRDLSAALADLD---IRQ-VDGVLYDLGVSSPQFDDSKRGFSYRFDAPLDMRMDQRQ 132
Query: 256 SLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTP 315
+L A+ I+N WP AE+ R+ YGEE + +I QAR + + +T +LV+LI++ P
Sbjct: 133 TLDAKTIVNEWPYAELVRIFSRYGEEHFSKQIARRIEQARAQAPITTTFQLVELIKAGIP 192
Query: 316 GMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRI 375
+ RR G A +VFQA+RIAVNDEL LE+SL + GGR+ VI+F SLEDR+
Sbjct: 193 A-KARRTGG-HPAKKVFQAIRIAVNDELSALEASLEQALKLINVGGRISVITFQSLEDRL 250
Query: 376 VKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEE 435
VK F +E+ ++D + + Q + +++ ++PI PSA E
Sbjct: 251 VKTMF---------------KEVSTVQDVPRGLPVVPEAAQP-HYQLVNRKPILPSAAEL 294
Query: 436 RLNCRCRSAKLRVIQKI 452
N R SAKLRVI+KI
Sbjct: 295 AENHRAHSAKLRVIEKI 311
>gi|332686267|ref|YP_004456041.1| rRNA small subunit methyltransferase H [Melissococcus plutonius
ATCC 35311]
gi|332370276|dbj|BAK21232.1| rRNA small subunit methyltransferase H [Melissococcus plutonius
ATCC 35311]
Length = 316
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 128/320 (40%), Positives = 173/320 (54%), Gaps = 35/320 (10%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGV-DVDPSALAKARAHLNSLLHGQAHPHLKTHTF 195
+VDCTLG GHS ++ E K H+ V D D AL A L + Q +K
Sbjct: 27 YVDCTLGGGGHSQYLLSKLSE-KGHLYVFDQDEMALTAASKRLAPYVEKQMVTFIKA--- 82
Query: 196 AKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQA 255
NFR +K L ++++ + VD I DLG+SS Q++ ERGFS D PLDMRMD +
Sbjct: 83 --NFRLLKEKL--FEKHVFQ--VDGIFYDLGVSSPQLDEAERGFSYHHDAPLDMRMDQTS 136
Query: 256 SLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTP 315
SL A +I+N + + +V Y EE + +I + RL + +TGELV++I+ V P
Sbjct: 137 SLTAYEIVNHYSYENLVKVFFRYSEEKFSKQIAREIERVRLNQTIQTTGELVEIIKKVIP 196
Query: 316 GMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRI 375
RR G A R+FQA+RIAVNDEL +E SL + L GR+GVI+FHSLEDRI
Sbjct: 197 A-PARRTGG-HPAKRIFQAIRIAVNDELGAIEVSLEQAIELLNKNGRIGVITFHSLEDRI 254
Query: 376 VKQTFLSIIDHNREDAEG---NEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSA 432
VK F S ++ G EE + I K++TK+PI PS
Sbjct: 255 VKNMFKS-YSTPKDLPPGLPVVPEEYQPIL------------------KVITKKPIIPSE 295
Query: 433 EEERLNCRCRSAKLRVIQKI 452
EE++ N R RSAKLR+ +KI
Sbjct: 296 EEQKQNNRSRSAKLRIAEKI 315
>gi|20808080|ref|NP_623251.1| S-adenosyl-methyltransferase MraW [Thermoanaerobacter tengcongensis
MB4]
gi|254479532|ref|ZP_05092851.1| S-adenosyl-methyltransferase MraW [Carboxydibrachium pacificum DSM
12653]
gi|21759279|sp|Q8R9F9.1|RSMH_THETN RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|20516663|gb|AAM24855.1| predicted S-adenosylmethionine-dependent methyltransferase involved
in cell envelope biogenesis [Thermoanaerobacter
tengcongensis MB4]
gi|214034534|gb|EEB75289.1| S-adenosyl-methyltransferase MraW [Carboxydibrachium pacificum DSM
12653]
Length = 308
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 127/319 (39%), Positives = 174/319 (54%), Gaps = 38/319 (11%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
+VD TLG GHS I++ KL I +D D A+ A+ L K +
Sbjct: 25 YVDGTLGGGGHSEEILKRLTTGKL-IAIDRDEEAILAAKERLKDY---------KNVIYI 74
Query: 197 K-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQA 255
K NF++IK +L N+ VD IL+DLG+SS Q+ ERGFS + D PLDMRMD +
Sbjct: 75 KDNFKNIKEIL----RNLGIEKVDGILLDLGVSSYQLEEVERGFSYMKDAPLDMRMDKTS 130
Query: 256 SLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTP 315
A D++N + + E+ RV+REYGEE + IV+ R +G + +T +LV++I+ P
Sbjct: 131 PFSAYDVVNRYSEKELERVIREYGEEKWASRIAKFIVEERKKGDIKTTSQLVEIIKKAIP 190
Query: 316 GMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRI 375
RR G A R FQA+RI VN+ELK L+ +L + L GR+ VI+FHSLEDRI
Sbjct: 191 A-SARRTGP-HPAKRTFQAIRIEVNEELKDLDRALEDMVEVLRGKGRIAVITFHSLEDRI 248
Query: 376 VKQTFLSIIDHNREDAEGNEEELRN--IRDDNINETWIRQIIQGWNGKILTKRPITPSAE 433
VK TF ++L N + T +Q + KI+TK+PI PS E
Sbjct: 249 VKNTF---------------KKLENPCTCPPGLPCTCGKQPVI----KIITKKPILPSKE 289
Query: 434 EERLNCRCRSAKLRVIQKI 452
E N R RSAKLRV +K+
Sbjct: 290 EVEENPRSRSAKLRVAEKL 308
>gi|423073814|ref|ZP_17062551.1| S-adenosyl-methyltransferase MraW [Desulfitobacterium hafniense
DP7]
gi|361855436|gb|EHL07412.1| S-adenosyl-methyltransferase MraW [Desulfitobacterium hafniense
DP7]
Length = 310
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 125/337 (37%), Positives = 176/337 (52%), Gaps = 31/337 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D + T +VDCTLG AGHS ++ E +G D DP A+ A+
Sbjct: 5 HVTVLLKETVDGVVRDPSGT-YVDCTLGGAGHSGYVLSRLSEKGKLVGFDQDPLAIKNAQ 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
+ +NF ++ L ++ V +L DLG+SS Q++
Sbjct: 64 DKFAG--------DPRVFLVNRNFEGLEESLQSLE----LLPVQGVLFDLGVSSPQLDEA 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS + D LDMRM+PQ L A+ ++N + +L +YGEE + IV+AR
Sbjct: 112 ERGFSYMQDAELDMRMNPQNPLSAKTLVNEGKAEMLAEILWKYGEEKWSKRIVEFIVEAR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +TGELVD+I+ P G R+ A R FQALRIAVNDEL LE +L
Sbjct: 172 KQKSITTTGELVDIIKRAIPA--GARREGPHPAKRTFQALRIAVNDELGVLERALDQVIR 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
CLAPGGR+GVI+FHSLEDRIVK+TF S + R + Q
Sbjct: 230 CLAPGGRVGVITFHSLEDRIVKETFNSWLG----------------RCTCPPVFPVCQCG 273
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+++ ++PI PS +E N R RSAKLR+ +K+
Sbjct: 274 AKAMARLVHRKPILPSPQEIEANPRARSAKLRIAEKL 310
>gi|313893629|ref|ZP_07827197.1| S-adenosyl-methyltransferase MraW [Veillonella sp. oral taxon 158
str. F0412]
gi|313441773|gb|EFR60197.1| S-adenosyl-methyltransferase MraW [Veillonella sp. oral taxon 158
str. F0412]
Length = 310
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/339 (38%), Positives = 182/339 (53%), Gaps = 33/339 (9%)
Query: 115 SHIPVMLGEVLD-VFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAK 173
+H V+L E +D V ++ + I +VDCTLG AGH+ A+ + + IG+D D AL+
Sbjct: 4 NHTSVLLRETVDSVVTNPKGI--YVDCTLGGAGHAHAVGKMLDPEGMIIGLDQDEDALSV 61
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
AR L+ L + + T NF ++K L +N VD + DLG+SS Q++
Sbjct: 62 ARQRLSDL-------NCQVLTIPTNFSNLKEAL----QNAGIYEVDGFIFDLGVSSYQLD 110
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
PERGFS + DGPLDMRMD A L AE+I+N + ++ +++R+YGEE + IV
Sbjct: 111 TPERGFSYMNDGPLDMRMDKDAPLTAEEIVNEYDAEQLLQIIRDYGEERWAKRIVEFIVN 170
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +TGELV +I+ P RQ A R FQA+RI VN EL L S
Sbjct: 171 ARQENRITTTGELVRIIKQAIPA--KARQDGPHPAKRTFQAIRIEVNRELAILHDSFVDA 228
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
L P G++GVI+FHSLEDRI KQTF + A EL ++ +
Sbjct: 229 VSMLKPKGKIGVITFHSLEDRITKQTFKEL-----STACICPPELPMCACNH------KA 277
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+++ N + I PSA E +N R RSAKLRV K+
Sbjct: 278 VVKAKN------KAIEPSAGEIEVNPRARSAKLRVAIKL 310
>gi|164686379|ref|ZP_02210409.1| hypothetical protein CLOBAR_02817 [Clostridium bartlettii DSM
16795]
gi|164601981|gb|EDQ95446.1| S-adenosyl-methyltransferase MraW [Clostridium bartlettii DSM
16795]
Length = 311
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/343 (35%), Positives = 182/343 (53%), Gaps = 38/343 (11%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
+ +H+ V+L E +D + +VDCT+G AGHS I++ + L IG D D +A+A
Sbjct: 2 EFNHVSVLLDECIDNLNIKED-GVYVDCTMGGAGHSKEIVKRLSKDGLFIGFDQDKNAIA 60
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
A+ L A + NF +IK L E I +D +L DLG+SS Q+
Sbjct: 61 TAKERL-------AEYSDRVRFVHSNFSNIKEEL----EKIGVYKIDGVLADLGVSSHQL 109
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ +RGFS + D PLDMRMD + A D++N++ + ++ +++++YGE++ + IV
Sbjct: 110 DEADRGFSYMHDAPLDMRMDIRKPFSAYDVVNTYTEEQLAKIIKDYGEDNWAKRIAKFIV 169
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
+ R + TGELVD+I+ P + R G A R FQA+RI VN+EL + +
Sbjct: 170 ETREEKPIEKTGELVDIIKKAIPK-KARIDGP-HPAKRTFQAIRIEVNNELGVINKMIDD 227
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTF----LSIIDHNREDAEGNEEELRNIRDDNINE 408
+ GGR+ +I+FHSLEDRIVK F LS + EL R D ++E
Sbjct: 228 AVSMMNKGGRICIITFHSLEDRIVKNEFKELSLSCV---------CPPELPICRCDKVSE 278
Query: 409 TWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++T++PI PS EE N R RSAKLRV +K
Sbjct: 279 V-----------KVITRKPILPSKEEVEANPRSRSAKLRVAEK 310
>gi|167040640|ref|YP_001663625.1| S-adenosyl-methyltransferase MraW [Thermoanaerobacter sp. X514]
gi|256752962|ref|ZP_05493788.1| S-adenosyl-methyltransferase MraW [Thermoanaerobacter ethanolicus
CCSD1]
gi|300914681|ref|ZP_07131997.1| S-adenosyl-methyltransferase MraW [Thermoanaerobacter sp. X561]
gi|307724085|ref|YP_003903836.1| S-adenosyl-methyltransferase MraW [Thermoanaerobacter sp. X513]
gi|262825863|sp|B0K3H8.1|RSMH_THEPX RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|166854880|gb|ABY93289.1| S-adenosyl-methyltransferase MraW [Thermoanaerobacter sp. X514]
gi|256748157|gb|EEU61235.1| S-adenosyl-methyltransferase MraW [Thermoanaerobacter ethanolicus
CCSD1]
gi|300889616|gb|EFK84762.1| S-adenosyl-methyltransferase MraW [Thermoanaerobacter sp. X561]
gi|307581146|gb|ADN54545.1| S-adenosyl-methyltransferase MraW [Thermoanaerobacter sp. X513]
Length = 308
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 125/342 (36%), Positives = 188/342 (54%), Gaps = 37/342 (10%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
+ SH V+L E ++ + + + +VD TLG GHS I++ KL I +D D A+
Sbjct: 2 EYSHKSVLLKETIE-YLNIKPEGIYVDGTLGGGGHSEEILKRLTTGKL-IAIDRDLDAIK 59
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
++ L + + NF++IK +L + NI VD IL+DLG+SS Q+
Sbjct: 60 ASKERLKN--------YKNVEYINDNFKNIKEILKSL--NI--DKVDGILLDLGVSSYQL 107
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+RGFS + D P+DMRMD + A D++N + E+ RV+REYGEE + IV
Sbjct: 108 EEVKRGFSYMKDAPMDMRMDKNSPFSAYDVVNKYSQQELERVIREYGEEKWASRIAKFIV 167
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
+ R +G + +T +LV++I++ P RR+G A R FQA+RI VN+ELK L+ ++
Sbjct: 168 KEREKGEIKTTFQLVEIIKNAIPA-SARREGP-HPAKRTFQAIRIEVNEELKGLDKAIED 225
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRN--IRDDNINETW 410
+ L GR+ +I+FHSLEDRIVK TF ++L N N+ T
Sbjct: 226 MVEVLRGKGRIAIITFHSLEDRIVKNTF---------------KKLENPCTCPPNMPCTC 270
Query: 411 IRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++ + KI+TK+P+ PS EE N R RSAKLRV +K+
Sbjct: 271 GKKPVV----KIITKKPVLPSKEEIETNSRSRSAKLRVAEKL 308
>gi|420198966|ref|ZP_14704650.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIHLM031]
gi|394272652|gb|EJE17102.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIHLM031]
Length = 311
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 121/335 (36%), Positives = 181/335 (54%), Gaps = 30/335 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ VML E +D + + + +VDCTLG AGH+ ++ + I +D D +A+ A+
Sbjct: 4 HVSVMLNETID-YLNIKEDGVYVDCTLGGAGHALYLLNQLNDKGRLIAIDQDLTAIENAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L LH H NFR + ++L +++ + VD I DLG+SS Q++ P
Sbjct: 63 EVLKEHLHKVTFVH-------NNFRELTNILNELEID----KVDGIYYDLGVSSPQLDVP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D LDMRMD SL A +++N WP + ++ YGEE + +I R
Sbjct: 112 ERGFSYHNDAKLDMRMDQTQSLSAHEVVNQWPYEALVKIFYRYGEEKFSKQIARRIEAHR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +T ELVD+I+ P + RR+G A RVFQA+RIAVNDEL E S+ +
Sbjct: 172 EQQPIETTLELVDVIKEGIPA-KARRKGG-HPAKRVFQAIRIAVNDELSAFEDSVEQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
C+ GGR+ VI+FHSLEDR+ KQ F ++ E + R + I E + ++
Sbjct: 230 CVKVGGRISVITFHSLEDRLCKQIF--------QEFEKGPDVPRGL--PVIPEAYTPKL- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
K + ++PIT + ++ N R RSAKLRV +
Sbjct: 279 -----KRVNRKPITATDDDLNENNRARSAKLRVAE 308
>gi|220925316|ref|YP_002500618.1| S-adenosyl-methyltransferase MraW [Methylobacterium nodulans ORS
2060]
gi|263456456|sp|B8IMX2.1|RSMH_METNO RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|219949923|gb|ACL60315.1| S-adenosyl-methyltransferase MraW [Methylobacterium nodulans ORS
2060]
Length = 339
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 123/343 (35%), Positives = 176/343 (51%), Gaps = 45/343 (13%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HIPV+L EV VD T GA G++ AI+ A P ++ I +D DP+A+A R
Sbjct: 7 HIPVLLKEVRSALRLGEGPGIVVDGTFGAGGYTRAILEADPGQRV-IAIDRDPTAIATGR 65
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG---VDAILMDLGMSSMQV 232
++ A ++ G++D + G VD +++D+G+SSMQ+
Sbjct: 66 GLAAAM--------------AGRLMLVQGRFGELDRLVRAQGIETVDGVVLDIGVSSMQL 111
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ +RGFS DGPLDMRM+ A D++N +AE+ ++ YGEE + I+
Sbjct: 112 DQAQRGFSFRQDGPLDMRME-SGGTSAADLVNEASEAELADIIYHYGEERRARAVARAIL 170
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
+AR RG + +T L +++ SV +R I ATR FQALRIAVNDEL L+ +LHA
Sbjct: 171 EARRRGRIATTATLAEIVASV---VRPEPGSGIHPATRTFQALRIAVNDELGELQRALHA 227
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLS----IIDHNREDAEGNEEELRNIRDDNINE 408
L PGGRL V++FHSLEDRIVKQ F + + +R + R+
Sbjct: 228 AERILRPGGRLAVVTFHSLEDRIVKQFFSARSGRAVSASRHLPMAEKPAPRSF------- 280
Query: 409 TWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
++TK PI PS E N R RSAKLR ++
Sbjct: 281 ------------TLVTKGPIGPSEAEATANPRARSAKLRAGER 311
>gi|297544901|ref|YP_003677203.1| S-adenosyl-methyltransferase MraW [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296842676|gb|ADH61192.1| S-adenosyl-methyltransferase MraW [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 308
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 123/343 (35%), Positives = 187/343 (54%), Gaps = 39/343 (11%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
+ SH V+L E ++ + + + +VD TLG GHS I++ + KL I +D D A+
Sbjct: 2 EYSHKSVLLKETIE-YLNIKPEGIYVDGTLGGGGHSEQILKRLTKGKL-IAIDRDLDAIK 59
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
++ L + + NF++IK +L + + VD I++DLG+SS Q+
Sbjct: 60 ASKERLKN--------YKNVKYINNNFKNIKEILKSLGVD----KVDGIILDLGVSSFQL 107
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
ERGFS + D PLDMRMD ++ A D++N + E+ +V+REYGEE + IV
Sbjct: 108 EEVERGFSYMKDAPLDMRMDKNSTFSAYDVVNKYSQQELEKVIREYGEEKWASRIAKFIV 167
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
+ R +G + +T +LV++I++ P RR+G A R FQA+RI VN+ELK L ++
Sbjct: 168 KEREKGEIKTTFQLVEIIKNAIPA-SARRKGP-HPAKRTFQAIRIEVNEELKGLGKAIED 225
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI- 411
+ L GR+ +I+FHSLEDRIVK TF ++L N N I
Sbjct: 226 MVEVLRGKGRIAIITFHSLEDRIVKNTF---------------KKLENPCTCPPNMPCIC 270
Query: 412 --RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ ++ KI+TK+P+ PS EE N R RSAKLRV +K+
Sbjct: 271 GKKPVV-----KIITKKPVVPSKEEIETNSRSRSAKLRVAEKL 308
>gi|392416994|ref|YP_006453599.1| S-adenosyl-methyltransferase MraW [Mycobacterium chubuense NBB4]
gi|390616770|gb|AFM17920.1| S-adenosyl-methyltransferase MraW [Mycobacterium chubuense NBB4]
Length = 380
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 118/289 (40%), Positives = 161/289 (55%), Gaps = 31/289 (10%)
Query: 104 DYESIIQQQQSSHIPVMLGEVLDVFSSSRTI-------TSFVDCTLGAAGHSSAIIRAHP 156
D +++ Q H+PV+L +++ + + T + VD TLGA GHS + P
Sbjct: 51 DGAAMVDDQ--PHVPVLLDRCVELLAPALTRQNPDGSGATLVDATLGAGGHSERFLAEFP 108
Query: 157 ELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRS 216
L+L IG+D DP AL A GQ + FA +++ I E + S
Sbjct: 109 GLRL-IGLDRDPDALRIA---------GQ-----RLAPFADRITLVRTRYDGIAEAVAES 153
Query: 217 -----GVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEV 271
GVDAIL DLG+SSMQ++ PERGFS D PLDMRMD ++ L A +ILN++ + +
Sbjct: 154 DCAAKGVDAILFDLGVSSMQLDRPERGFSYSTDAPLDMRMDAESDLTAAEILNTYDEKAL 213
Query: 272 GRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRV 331
R+LREYGEE + IV+ R L +TGELV+L+ P RR G A R
Sbjct: 214 ARLLREYGEERFAGRIAAHIVRRRATAPLRTTGELVELLYQAIPAP-ARRTGG-HPAKRT 271
Query: 332 FQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTF 380
FQALRIAVN EL++L ++ A L PGGR+ V+++ SLEDRIVK F
Sbjct: 272 FQALRIAVNAELESLRRAIPAALAVLRPGGRIAVMAYQSLEDRIVKSEF 320
>gi|268610557|ref|ZP_06144284.1| S-adenosyl-methyltransferase MraW [Ruminococcus flavefaciens FD-1]
Length = 313
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 127/338 (37%), Positives = 177/338 (52%), Gaps = 37/338 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HIPVML E ++ + +VD T G AGHSSAI E I +D DP A+A A
Sbjct: 5 HIPVMLTECIEGLAIDPD-GIYVDGTAGGAGHSSAIAAKLSEKGRLIALDRDPDAVAVAT 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L+ + Q H+ N+ I+SVL +++ + VD ILMDLG+SS Q++
Sbjct: 64 ERLSKFSNAQV-----IHS---NYSEIRSVLDRLEID----SVDGILMDLGVSSFQLDEG 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
RGFS D PLDMRM + A DI+N++ +AE+ R++ EYGEE + + I++AR
Sbjct: 112 SRGFSYHTDAPLDMRMS-KVGTSAADIVNTYSEAELARIMFEYGEEKFSRRIASNIIKAR 170
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +T +L D+I+ P R + K + FQALRIAVN E L L F
Sbjct: 171 EKAPVETTLQLADIIRESVPQKARRDKNPCK---KTFQALRIAVNSEFDHLSKGLEDAFY 227
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
CL P GRL VI+FHSLEDR+VKQ F + I Q +
Sbjct: 228 CLKPQGRLAVITFHSLEDRLVKQKFAAWC------------------KGCICPPDFPQCV 269
Query: 416 QGW--NGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
G G+++ ++PI EE N R RSAKLR+I++
Sbjct: 270 CGRKPEGRLVNRKPIEAGEEELENNNRSRSAKLRIIER 307
>gi|393766838|ref|ZP_10355391.1| S-adenosyl-methyltransferase MraW [Methylobacterium sp. GXF4]
gi|392727618|gb|EIZ84930.1| S-adenosyl-methyltransferase MraW [Methylobacterium sp. GXF4]
Length = 355
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 128/343 (37%), Positives = 180/343 (52%), Gaps = 47/343 (13%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+PV+L EV++ + VD T GA G++ A++ A P L++ I +D DP A+A +
Sbjct: 25 HVPVLLDEVVESLRLDGGLA--VDGTFGAGGYTRALLAADPTLQV-IAIDRDPQAIANGQ 81
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L G+A L+ F + ++LG+ E + D +++D+G+SSMQ++ P
Sbjct: 82 T-----LVGEAGGRLRL--VPGRFGDLDALLGEAGE----AKADRVVLDIGVSSMQLDAP 130
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS DGPLDMRM A DI+N + + ++ YGEE + I +AR
Sbjct: 131 ERGFSFRNDGPLDMRMGNDGP-SAADIVNEADETVLADIIYHYGEERRSRAVARTIHEAR 189
Query: 296 LRGGLHSTGELVDLIQSVT---PGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
RG + +T +L +L+ SV PG I ATR FQ LRIAVNDEL L +LHA
Sbjct: 190 RRGRIETTAQLAELVASVVWSEPG------SHIHPATRTFQGLRIAVNDELGELVRALHA 243
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLS----IIDHNREDAEGNEEELRNIRDDNINE 408
LAPGGRL V++FHSLEDRIVKQ F + +R G E +R+ R
Sbjct: 244 AERVLAPGGRLAVVTFHSLEDRIVKQFFAARSGRSAQGSRHLPGGQTETIRSFR------ 297
Query: 409 TWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
++TK P+ P E N R RSAKLR ++
Sbjct: 298 -------------LVTKGPVLPGEAETARNPRARSAKLRAAER 327
>gi|254976251|ref|ZP_05272723.1| S-adenosyl-methyltransferase [Clostridium difficile QCD-66c26]
gi|255093637|ref|ZP_05323115.1| S-adenosyl-methyltransferase [Clostridium difficile CIP 107932]
gi|255315386|ref|ZP_05356969.1| S-adenosyl-methyltransferase [Clostridium difficile QCD-76w55]
gi|255518051|ref|ZP_05385727.1| S-adenosyl-methyltransferase [Clostridium difficile QCD-97b34]
gi|255651167|ref|ZP_05398069.1| S-adenosyl-methyltransferase [Clostridium difficile QCD-37x79]
gi|260684233|ref|YP_003215518.1| S-adenosyl-methyltransferase MraW [Clostridium difficile CD196]
gi|260687892|ref|YP_003219026.1| S-adenosyl-methyltransferase MraW [Clostridium difficile R20291]
gi|306521014|ref|ZP_07407361.1| S-adenosyl-methyltransferase MraW [Clostridium difficile QCD-32g58]
gi|384361875|ref|YP_006199727.1| 16S rRNA m(4)C1402 methyltranserfase [Clostridium difficile BI1]
gi|260210396|emb|CBA64792.1| S-adenosyl-methyltransferase [Clostridium difficile CD196]
gi|260213909|emb|CBE05954.1| S-adenosyl-methyltransferase [Clostridium difficile R20291]
Length = 311
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 119/339 (35%), Positives = 183/339 (53%), Gaps = 34/339 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E ++ + + +VDCT+G AGHS I++ + L IG D D +A++ A+
Sbjct: 5 HVSVLLNECIENLNI-KPDGVYVDCTMGGAGHSKEIVKKLSDKGLFIGFDQDKNAISTAK 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L+ H NF +IK L E I +D +L DLG+SS Q++
Sbjct: 64 ERLSEYESRVKFVH-------SNFENIKEEL----EKIGVYKIDGVLADLGVSSHQLDEA 112
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
+RGFS + D PLDMRMD + A D++N++ + E+ +++++YGE++ + IV+ R
Sbjct: 113 DRGFSYMQDAPLDMRMDVRCEFSAYDVVNTYTEDELTKIIKDYGEDNWAKRIAKFIVEER 172
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +TG+LVD+I+ P + R G A R FQA+RI VN+EL + ++
Sbjct: 173 ANKPIETTGKLVDIIKKAIPK-KARIDGP-HPAKRTFQAIRIEVNNELGVITKMINDASS 230
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNI--NETWIRQ 413
+ GGR+ +I+FHSLEDRIVK F +++ D I I Q
Sbjct: 231 IMNKGGRICIITFHSLEDRIVKNAF------------------KHLASDCICPQHLPICQ 272
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ KI+T++PI PS EE +N R RSAKLRV +KI
Sbjct: 273 CDKESEVKIITRKPILPSEEEIEVNPRSRSAKLRVAEKI 311
>gi|384439445|ref|YP_005654169.1| Ribosomal RNA small subunit methyltransferase H [Thermus sp.
CCB_US3_UF1]
gi|359290578|gb|AEV16095.1| Ribosomal RNA small subunit methyltransferase H [Thermus sp.
CCB_US3_UF1]
Length = 286
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 129/338 (38%), Positives = 178/338 (52%), Gaps = 59/338 (17%)
Query: 114 SSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAK 173
+ HIPV+ GE LD+ R +VD TLG AGH+ I+ L +G+D DP A+A+
Sbjct: 5 TQHIPVLYGEALDLLKV-RPGEVYVDATLGGAGHARGILERG---GLVLGLDQDPEAVAR 60
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
A+A LN P L+ F NFRH+K VL E V IL DLG+SS ++
Sbjct: 61 AQA-LNL-------PGLRV--FQANFRHLKGVL----EAAGVRQVAGILADLGVSSFHLD 106
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
+P RGFS +GPLDMRM + AE+ +N P E+ R+LR+ GEE + + IV+
Sbjct: 107 DPRRGFSYQKEGPLDMRMGGEGP-TAEEAVNRLPLEELFRILRDLGEEKQAYRIAKAIVE 165
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + + +T +L ++++ G R+ A + FQALR+ VNDEL L L
Sbjct: 166 ARRKAPIRTTTQLAEIVRQAV----GFRKAG-HPARKTFQALRMYVNDELAALGEFLAQA 220
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
+ LAPGGRL VI+FHSLEDR+VK R +R+ +
Sbjct: 221 EEALAPGGRLVVITFHSLEDRMVK---------------------RFLRESGL------- 252
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K+LTK+P+ PS +E N R RSAKLR +K
Sbjct: 253 -------KVLTKKPLVPSPKEVEQNPRARSAKLRAAEK 283
>gi|196230915|ref|ZP_03129776.1| S-adenosyl-methyltransferase MraW [Chthoniobacter flavus Ellin428]
gi|196225256|gb|EDY19765.1| S-adenosyl-methyltransferase MraW [Chthoniobacter flavus Ellin428]
Length = 332
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 131/364 (35%), Positives = 187/364 (51%), Gaps = 52/364 (14%)
Query: 92 KEKRRTRSNKDYDYESIIQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAI 151
K +R + + + Y+Y H V+L E ++ + + VD TLG GH++A+
Sbjct: 14 KSRRPSLNPRPYEY----------HESVLLAETVERLAPAPG-KVIVDGTLGGGGHTAAL 62
Query: 152 IRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDE 211
+ A ++ IG D DP ALA A G+ K F FR + + + E
Sbjct: 63 LAAGAQV---IGFDQDPEALAFA---------GR-----KLAEFGGQFRPVHTSFAKAGE 105
Query: 212 NILRSGVDAI---LMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPD 268
+ + GV+ I ++DLG+SS Q++ PERGFS + DGPLDMRMDP + A D++N+
Sbjct: 106 ALDQLGVEKIDGAMLDLGVSSRQLDAPERGFSFMHDGPLDMRMDPTNLISAADLVNTMAG 165
Query: 269 AEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTA 328
++ ++ R YGEE + +V+ RL +T +L ++ V P R A
Sbjct: 166 DQLEKIFRNYGEEPAARKIAAHLVRDRLVAPFRTTLQLAQAVERVVP-----RHSRTHPA 220
Query: 329 TRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNR 388
TRVFQALRIAVN EL+ L L LAPGGRL +I+FHSLEDRIVK F R
Sbjct: 221 TRVFQALRIAVNRELEALTLGLEQFSQRLAPGGRLAIITFHSLEDRIVKVFF-----KER 275
Query: 389 EDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRV 448
A + E R + I+ I + GK P+ S E+R N R RSAKLRV
Sbjct: 276 AAAFIDRPEWPEARPNPIH------IFKAITGK-----PVVASDAEQRANPRSRSAKLRV 324
Query: 449 IQKI 452
+++I
Sbjct: 325 VERI 328
>gi|89895661|ref|YP_519148.1| S-adenosyl-methyltransferase MraW [Desulfitobacterium hafniense
Y51]
gi|219670081|ref|YP_002460516.1| S-adenosyl-methyltransferase MraW [Desulfitobacterium hafniense
DCB-2]
gi|122482071|sp|Q24TD8.1|RSMH_DESHY RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|263446217|sp|B8FT64.1|RSMH_DESHD RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|89335109|dbj|BAE84704.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219540341|gb|ACL22080.1| S-adenosyl-methyltransferase MraW [Desulfitobacterium hafniense
DCB-2]
Length = 310
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 125/337 (37%), Positives = 176/337 (52%), Gaps = 31/337 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D + T +VDCTLG AGHS ++ E +G D DP A+ A+
Sbjct: 5 HVTVLLKETVDGVVRDPSGT-YVDCTLGGAGHSGYVLSRLSEKGKLVGFDQDPLAIKNAQ 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
+ +NF ++ L ++ V +L DLG+SS Q++
Sbjct: 64 DKFAG--------DPRVFLVNRNFEGLEESLQSLE----LLPVQGVLFDLGVSSPQLDEA 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS + D LDMRM+PQ L A+ ++N + +L +YGEE + IV+AR
Sbjct: 112 ERGFSYMQDAELDMRMNPQNPLSAKTLVNEGKAEMLAEILWKYGEEKWSKRIVEFIVEAR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +TGELVD+I+ P G R+ A R FQALRIAVNDEL LE +L
Sbjct: 172 KQKSITTTGELVDIIKRAIPA--GARREGPHPAKRTFQALRIAVNDELGVLERALDQVIR 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
CLAPGGR+GVI+FHSLEDRIVK+TF S + R + Q
Sbjct: 230 CLAPGGRVGVITFHSLEDRIVKETFNSWLG----------------RCTCPPVFPVCQCG 273
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+++ ++PI PS +E N R RSAKLR+ +K+
Sbjct: 274 ARAMARLVHRKPILPSPQEIEANPRARSAKLRIAEKL 310
>gi|403383425|ref|ZP_10925482.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Kurthia
sp. JC30]
Length = 312
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 129/338 (38%), Positives = 180/338 (53%), Gaps = 32/338 (9%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
+H V+L E +D + R +VDCTLG AGHS ++ + I D D A+ A
Sbjct: 3 NHTTVLLKETVDGLNI-RPDGIYVDCTLGGAGHSEYLVSQLSDEGRLICFDQDQIAIDNA 61
Query: 175 RAHLNSLLHGQAHPHLKTHTFA-KNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
+ L P+L TF NFR+I+ L + + VD IL DLG+SS Q++
Sbjct: 62 KERLA--------PYLDRVTFVHSNFRYIEQELNALG----ITTVDGILYDLGVSSPQLD 109
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
ERGFS D PLDMRMD A L A ++N W +++ R+ YGEE + KI +
Sbjct: 110 VAERGFSYHQDAPLDMRMDQTAPLTAFHVVNEWDYSDLVRIFYRYGEEKFSKQIARKIEE 169
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + + +TGELV+LI+ P R+ G A RVFQA+RIAVNDEL E SL
Sbjct: 170 ARAKKPVETTGELVELIKEGIPAAARRKGG--HPAKRVFQAIRIAVNDELGAAEDSLQQA 227
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
+ GGR+ VI+FHSLEDR+ K F +E ++ D I +
Sbjct: 228 LSLIGIGGRVSVITFHSLEDRLCKTIF---------------KEKSSLPDLPPGLPIIPE 272
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
++ + K++T++PI PS EE N R RSAKLR+I++
Sbjct: 273 HLKP-DFKLVTRKPILPSDEELAENNRSRSAKLRIIER 309
>gi|289578681|ref|YP_003477308.1| S-adenosyl-methyltransferase MraW [Thermoanaerobacter italicus Ab9]
gi|289528394|gb|ADD02746.1| S-adenosyl-methyltransferase MraW [Thermoanaerobacter italicus Ab9]
Length = 308
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 123/343 (35%), Positives = 186/343 (54%), Gaps = 39/343 (11%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
+ SH V+L E ++ + + + +VD TLG GHS I++ + KL I +D D A+
Sbjct: 2 EYSHKSVLLKETIE-YLNIKPEGIYVDGTLGGGGHSEEILKRLTKGKL-IAIDRDLDAIK 59
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
+ L + + NF++IK +L + + VD I++DLG+SS Q+
Sbjct: 60 AGKERLKN--------YKNVKYINNNFKNIKEILKSLGVD----KVDGIILDLGVSSFQL 107
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
ERGFS + D PLDMRMD ++ A D++N + E+ +V+REYGEE + IV
Sbjct: 108 EEVERGFSYMKDAPLDMRMDKNSTFSAYDVVNKYSQQELEKVIREYGEEKWASRIAKFIV 167
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
+ R +G + +T +LV++I++ P RR+G A R FQA+RI VN+ELK L ++
Sbjct: 168 KEREKGEIKTTFQLVEIIKNAIPA-SARRKGP-HPAKRTFQAIRIEVNEELKGLGKAIED 225
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI- 411
+ L GR+ +I+FHSLEDRIVK TF ++L N N I
Sbjct: 226 MVEVLRGKGRIAIITFHSLEDRIVKNTF---------------KKLENPCTCPPNMPCIC 270
Query: 412 --RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ ++ KI+TK+P+ PS EE N R RSAKLRV +K+
Sbjct: 271 GKKPVV-----KIITKKPVVPSKEEIETNSRSRSAKLRVAEKL 308
>gi|383753241|ref|YP_005432144.1| putative ribosomal RNA small subunit methyltransferase H
[Selenomonas ruminantium subsp. lactilytica TAM6421]
gi|381365293|dbj|BAL82121.1| putative ribosomal RNA small subunit methyltransferase H
[Selenomonas ruminantium subsp. lactilytica TAM6421]
Length = 319
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 122/338 (36%), Positives = 177/338 (52%), Gaps = 32/338 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI VML E + +++ T +VDCTLG GHSS I E IG+D D +A+A A
Sbjct: 5 HISVMLEETVKGLVTTKEGT-YVDCTLGGGGHSSLIASMLTEKGRLIGIDQDAAAIAAAS 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L + NFR+++ +L D + VD ++ DLG+SS Q++
Sbjct: 64 ERLQD-------AKCRVDIVHNNFRNLEQILADEDAQL----VDGVVFDLGVSSHQIDTA 112
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS + D PLDMRM+P+A A D++N++ + E+ R+ +EYGEE + IVQ R
Sbjct: 113 ERGFSYIQDAPLDMRMNPEADFSAYDVVNTYEEKELNRIFKEYGEERWSKRIAQFIVQER 172
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +TGELVD+I P + G A R+FQA+RI VNDEL LE+S
Sbjct: 173 AQKPIETTGELVDIICKAVPKAVRQAAGG-HPAKRIFQAIRIEVNDELGILENSFRTAVA 231
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L PGGR+ +I+FHSLEDRI K L+ + I + +
Sbjct: 232 HLKPGGRIAIITFHSLEDRIAKNV------------------LKELARGCICPPELPVCM 273
Query: 416 QGWNGKI-LTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+I + +PI +A+E N R +SAKLR+ +K+
Sbjct: 274 CSHQPEIKIIGKPIQATADELEHNSRSKSAKLRIAEKL 311
>gi|300813315|ref|ZP_07093670.1| S-adenosyl-methyltransferase MraW [Peptoniphilus sp. oral taxon 836
str. F0141]
gi|300512586|gb|EFK39731.1| S-adenosyl-methyltransferase MraW [Peptoniphilus sp. oral taxon 836
str. F0141]
Length = 320
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 124/344 (36%), Positives = 182/344 (52%), Gaps = 39/344 (11%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
+ H+ V+ EVL+ + R ++D T+G AGHS I + L IG+D D A+
Sbjct: 2 EFKHVSVLYNEVLENLNI-RENKIYMDATIGGAGHSKGIAKILNNSGLLIGIDQDKDAIK 60
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
K+ H + F N+++ + +L +++ VD IL+DLG+SS Q
Sbjct: 61 KS--------HEVLSEYENVKLFNTNYKNFEEIL----DSLHIKKVDGILLDLGVSSYQF 108
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ +RGFS D LDMRMD L A+ I+N + E+ R+++EYGEE+ + IV
Sbjct: 109 DKGKRGFSYRFDSELDMRMDKTLPLTAKTIVNEYSKDELYRIIKEYGEENWAKRIAEFIV 168
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
Q R +++T +LV++I+ P +G R+ A R FQALRI VNDEL L+ S++
Sbjct: 169 QERKIKKINTTFDLVEVIKKAVP--KGARRDGPHPAKRTFQALRIEVNDELNVLKKSIYK 226
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
+ L PGGRL +ISFHSLEDRIVK F R + D +
Sbjct: 227 FVERLNPGGRLAIISFHSLEDRIVKNAF------------------RYLYSDCVCPP--E 266
Query: 413 QIIQGWNGK----ILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
QII + K I+T++PI P+ EE + N R SAKLRV +K+
Sbjct: 267 QIICTCDKKREIEIITRKPIVPTKEEIKNNNRSHSAKLRVAEKL 310
>gi|255656635|ref|ZP_05402044.1| S-adenosyl-methyltransferase [Clostridium difficile QCD-23m63]
gi|296449909|ref|ZP_06891673.1| S-adenosyl-methyltransferase MraW [Clostridium difficile NAP08]
gi|296878290|ref|ZP_06902299.1| S-adenosyl-methyltransferase MraW [Clostridium difficile NAP07]
gi|296261179|gb|EFH08010.1| S-adenosyl-methyltransferase MraW [Clostridium difficile NAP08]
gi|296430738|gb|EFH16576.1| S-adenosyl-methyltransferase MraW [Clostridium difficile NAP07]
Length = 311
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 120/339 (35%), Positives = 180/339 (53%), Gaps = 34/339 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E ++ + + +VDCT+G AGHS I++ + L IG D D +A+ A+
Sbjct: 5 HVSVLLNECIENLNI-KPDGVYVDCTMGGAGHSKEIVKKLSDKGLFIGFDQDKNAINTAK 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L+ H NF +IK L E I +D +L DLG+SS Q++
Sbjct: 64 ERLSEYEGRVKFVH-------SNFENIKEEL----EKIGVYKIDGVLADLGVSSHQLDEA 112
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
+RGFS + D PLDMRMD + A D++N++ + E+ +++++YGE++ + IV+ R
Sbjct: 113 DRGFSYMQDAPLDMRMDVRCEFSAYDVVNTYTEDELTKIIKDYGEDNWAKRIAKFIVEER 172
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +TGELVD+I+ P + R G A R FQA+RI VN+EL + ++
Sbjct: 173 ANKTIETTGELVDIIKKAIPK-KARIDGP-HPAKRTFQAIRIEVNNELGVITKMINDASS 230
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNI--NETWIRQ 413
+ GGR+ +I+FHSLEDRIVK F + + D I I Q
Sbjct: 231 IMNEGGRICIITFHSLEDRIVKNAF------------------KYLASDCICPQHLPICQ 272
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ KI+T++PI PS EE N R RSAKLRV +KI
Sbjct: 273 CDKESEVKIITRKPILPSEEEVEANPRSRSAKLRVAEKI 311
>gi|157825941|ref|YP_001493661.1| S-adenosyl-methyltransferase MraW [Rickettsia akari str. Hartford]
gi|167011835|sp|A8GP28.1|RSMH_RICAH RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|157799899|gb|ABV75153.1| S-adenosyl-methyltransferase MraW [Rickettsia akari str. Hartford]
Length = 306
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 125/340 (36%), Positives = 184/340 (54%), Gaps = 40/340 (11%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
+HIPVML EVL V + ++DCT GA G+S AI+ + + +D DP+ + KA
Sbjct: 4 THIPVMLSEVLKVLDP-KGGEFYLDCTFGAGGYSKAILESCD--CYVVALDRDPNVIKKA 60
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+ + + + T+ FA +F +K D I++DLG+SSMQ++
Sbjct: 61 EEIKQN--YVERFDFIATN-FADSFAKLKE-----------KQFDGIVLDLGVSSMQLDV 106
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
+RGFS L DGPLDMRM Q AE+ +N+ + E+ ++ +YG ES + IV+
Sbjct: 107 ADRGFSFLHDGPLDMRMSGQG-FSAEEFVNTLEEKEIADIIYKYGNESFSRRIAKSIVEY 165
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + STG+L ++++S G R+G I AT+ FQA+RI +NDEL LE L
Sbjct: 166 RKTARIDSTGKLAEIVRSSI----GFRKGKIDPATKTFQAIRIYINDELGELERFLMNVK 221
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE--TWIR 412
+ L GRL V+SFHSLED I+K F +E++E + +DD I + W+R
Sbjct: 222 NILKKDGRLVVVSFHSLEDMIIKNFF-------KENSEKPVARSKYAKDDIIIDPNKWLR 274
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
I+T + + PS +E RLN R RSAKLR +KI
Sbjct: 275 ---------IITNKALAPSDKEIRLNIRARSAKLRTAKKI 305
>gi|347750616|ref|YP_004858181.1| S-adenosyl-methyltransferase MraW [Bacillus coagulans 36D1]
gi|347583134|gb|AEO99400.1| S-adenosyl-methyltransferase MraW [Bacillus coagulans 36D1]
Length = 309
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 125/338 (36%), Positives = 171/338 (50%), Gaps = 35/338 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + +VDCTLG GHS+ +++ L+ D D +A+ A+
Sbjct: 4 HKTVLLKETVDGLHI-KPDGIYVDCTLGGGGHSAYLLQQLTGGHLY-AFDQDETAIQHAK 61
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
AH + NFR++KS L VD IL DLG+SS Q++ P
Sbjct: 62 EKF-------AHDQNRITFIKSNFRYLKSELNARGVQ----AVDGILYDLGVSSPQLDTP 110
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD L A +++N WP ++ R+ YGEE + KI +R
Sbjct: 111 ERGFSYQHDAPLDMRMDLDTPLTAYEVVNEWPYEKLVRIFFRYGEEKFSKQIARKIEASR 170
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +TGEL DLI+ P R+ G A RVFQA+RIAVNDEL E+SL
Sbjct: 171 AKKPIETTGELADLIKEAIPAPARRKGG--HPAKRVFQAIRIAVNDELSAFETSLTDAIS 228
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L PGGR+ VI+FHSLEDRI K L+ + I
Sbjct: 229 LLKPGGRVSVITFHSLEDRICKNI------------------LKEYSSAGDLPHGLPVIP 270
Query: 416 QGWNG--KILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ + K++T++PI P+ EE N R RSAKLR+ +K
Sbjct: 271 KEYEPVLKLITRKPIVPNDEEVGENNRSRSAKLRIAEK 308
>gi|333978587|ref|YP_004516532.1| Ribosomal RNA small subunit methyltransferase H [Desulfotomaculum
kuznetsovii DSM 6115]
gi|333822068|gb|AEG14731.1| Ribosomal RNA small subunit methyltransferase H [Desulfotomaculum
kuznetsovii DSM 6115]
Length = 343
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 131/362 (36%), Positives = 200/362 (55%), Gaps = 39/362 (10%)
Query: 94 KRRTRSNKDYDYESIIQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAII- 152
KRR S ++ + ++++ +H PV+L EVL + + ++ ++VDCT+G GH++AI+
Sbjct: 8 KRREVSGRE---DQGMEERNFTHQPVLLEEVL-AWLNPQSGGTYVDCTVGGGGHAAAILE 63
Query: 153 RAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDEN 212
++ P +L IG+D DP AL A +L +G+ + +NF ++ VL ++
Sbjct: 64 KSSPAGRL-IGLDQDPHALEAAARYLAP--YGE-----RVTLVRENFINLPQVLDELGI- 114
Query: 213 ILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVG 272
V+ I+ DLG+SS Q++ PERGFS +GPLDMRMDP A D++N+ + E+
Sbjct: 115 ---PAVEGIVFDLGVSSPQLDVPERGFSYHHEGPLDMRMDPAMRHTAADLVNNLGEEELA 171
Query: 273 RVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVF 332
++ YGEE + + IV+ R + +T +LV++I+ P + RR G A R F
Sbjct: 172 GIIARYGEERWARRIASFIVRKRQHQPIITTSQLVEIIKEAIPA-KSRRSGP-HPARRTF 229
Query: 333 QALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAE 392
QALRIAVN EL+ L +L D L PGGR+ VI+FHSLEDRIVK +F
Sbjct: 230 QALRIAVNRELEILPEALRQAVDLLLPGGRILVITFHSLEDRIVKNSF------------ 277
Query: 393 GNEEELRNIRDDNINETWIRQIIQGWNG--KILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
R + + + Q I G ++LT + PS E LN R RSA+LRV +
Sbjct: 278 ------RRLANPCVCPPSFPQCICGQKPVLRVLTPGGVVPSEREVNLNPRSRSARLRVAE 331
Query: 451 KI 452
K+
Sbjct: 332 KL 333
>gi|258508273|ref|YP_003171024.1| S-adenosyl-methyltransferase MraW [Lactobacillus rhamnosus GG]
gi|385827945|ref|YP_005865717.1| methyltransferase [Lactobacillus rhamnosus GG]
gi|257148200|emb|CAR87173.1| S-adenosyl-methyltransferase MraW [Lactobacillus rhamnosus GG]
gi|259649590|dbj|BAI41752.1| methyltransferase [Lactobacillus rhamnosus GG]
Length = 313
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 122/317 (38%), Positives = 176/317 (55%), Gaps = 30/317 (9%)
Query: 136 SFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTF 195
++VD TLG GH+ II +L I D D +A+A + +L P L
Sbjct: 25 TYVDATLGRGGHTRQIINQLTNGRL-IAFDQDEAAIAAVKRQFGTL-----PPQLTL--V 76
Query: 196 AKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQA 255
+NFR + + L +D +R VD +L DLG+SS Q ++ +RGFS D PLDMRMD +
Sbjct: 77 HRNFRDLSAALADLD---IRQ-VDGVLYDLGVSSPQFDDSKRGFSYRFDAPLDMRMDQRQ 132
Query: 256 SLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTP 315
+L A+ I+N WP AE+ R+ YGEE + +I QAR + + +T +LV+LI++ P
Sbjct: 133 TLDAKTIVNEWPYAELVRIFSRYGEEHFSKQIARRIEQARAQAPITTTFQLVELIKAGIP 192
Query: 316 GMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRI 375
+ RR G A +VFQA+RIAVNDEL LE+SL + GGR+ VI+F SLEDR+
Sbjct: 193 A-KARRTGG-HPAKKVFQAIRIAVNDELSALEASLEQALKLINVGGRISVITFQSLEDRL 250
Query: 376 VKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEE 435
VK F +E+ ++D + + Q + +++ ++PI PSA E
Sbjct: 251 VKTMF---------------KEVSTVQDVPRGLPVVPEAAQP-HYQLVNRKPILPSAAEL 294
Query: 436 RLNCRCRSAKLRVIQKI 452
N R SAKLRVI+KI
Sbjct: 295 AENHRAHSAKLRVIEKI 311
>gi|383500632|ref|YP_005413992.1| 16S rRNA m(4)C1402 methyltransferase [Rickettsia prowazekii str.
RpGvF24]
gi|380758329|gb|AFE53565.1| 16S rRNA m(4)C1402 methyltransferase [Rickettsia prowazekii str.
RpGvF24]
Length = 307
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 128/339 (37%), Positives = 188/339 (55%), Gaps = 39/339 (11%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAG-HSSAIIRA-HPELKLHIGVDVDPSALAK 173
HIPVML EVL V + + S++DCT GA G +S+AI+ + + + +D DP+ +
Sbjct: 5 HIPVMLSEVLAVLAP-KGYESYLDCTFGAGGGYSNAILNSCYCSV---TSLDRDPNVIES 60
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
+G+ +KT+ FA +FR +K D I+MDLG+SSMQ++
Sbjct: 61 VEKIKQD--YGERFNFIKTN-FADSFRKLK-----------HKKFDGIVMDLGVSSMQLD 106
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
+RGFS L DGPLDMRM Q AE+ +N+ + E+ V+ +YG ES + IV+
Sbjct: 107 IADRGFSFLYDGPLDMRMSVQG-FSAEEFVNTADEEEIADVIYKYGNESLSRRIAKSIVE 165
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
R + ST +L ++++ G R+G I +AT+ FQA+RI +N+EL LE L
Sbjct: 166 YRKTARIDSTRKLAEIVRYSI----GFRKGKIDSATKTFQAIRIYINNELGELEQFLANV 221
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
+ L GRL V+SFHSLEDRIVK F +E++E + +D+ I+
Sbjct: 222 KNILKKDGRLVVVSFHSLEDRIVKNFF-------KENSEKQVARSKYAKDE------IKI 268
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
W KI+T + +TPS++E RLN R RSAKLR +KI
Sbjct: 269 DPNKW-LKIITPKVLTPSSQEIRLNVRARSAKLRAAKKI 306
>gi|18310847|ref|NP_562781.1| S-adenosyl-methyltransferase MraW [Clostridium perfringens str. 13]
gi|20138978|sp|Q8XJ96.1|RSMH_CLOPE RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|18145529|dbj|BAB81571.1| conserved hypothetical protein [Clostridium perfringens str. 13]
Length = 310
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 125/341 (36%), Positives = 184/341 (53%), Gaps = 33/341 (9%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
+ H+ V+L E ++ + +VDCTLG AGHSS I++ I D D AL
Sbjct: 2 EFKHVSVLLDECINALNIKED-GIYVDCTLGGAGHSSEIVKRLSSDGRLIRFDQDKDALK 60
Query: 173 KARAHLNSLLHGQAHPHLKTHTFA-KNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQ 231
A G+ K T+ NF I VL + + GVD ILMDLG+SS Q
Sbjct: 61 AA---------GERLKDYKNVTYVHSNFYAIYDVLTDLGID----GVDGILMDLGVSSYQ 107
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++N ERGFS + D PLDMRM+ + A +I+N++ + E+ R+++EYGEE + + I
Sbjct: 108 LDNGERGFSYMQDAPLDMRMNRENEFSAYEIVNTYSEEELYRIIKEYGEEKFAKRIASFI 167
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
V+ R + +T ELV++I++ P + RR+G A R FQA+RI VN EL+ + ++
Sbjct: 168 VKNREEKNIETTLELVEIIKAAIPA-KARREGP-HPAKRTFQAIRIEVNKELEIISKTIL 225
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
L GGR+ +I+FHSLEDRIVK TF +EL N +E +
Sbjct: 226 DGVKKLNKGGRMAIITFHSLEDRIVKNTF---------------KELAN-PCTCPSEFPV 269
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ K+++++PI S EE N R RSAKLR+I+K+
Sbjct: 270 CVCNRKPEVKLISRKPIEASKEELEFNPRSRSAKLRIIEKL 310
>gi|253681660|ref|ZP_04862457.1| S-adenosyl-methyltransferase MraW [Clostridium botulinum D str.
1873]
gi|253561372|gb|EES90824.1| S-adenosyl-methyltransferase MraW [Clostridium botulinum D str.
1873]
Length = 309
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 125/342 (36%), Positives = 192/342 (56%), Gaps = 40/342 (11%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
+H+PV+L E +D + +VDCTLG AGHSS I++ + IG+D D +AL A
Sbjct: 4 NHVPVLLEETIDSLNIKED-GIYVDCTLGGAGHSSYILKRLSKKGKLIGIDQDINALKAA 62
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+ L + + H NF ++ SVL ++ NI + VD ILMDLG+SS Q++
Sbjct: 63 KEKLKNY-DNVIYVH-------NNFYNLASVLDEL--NIEK--VDGILMDLGVSSYQLDT 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS + D LDMRM+ + S+ A +I+N + + E+ R+++EYGEE + IV+
Sbjct: 111 AERGFSYMQDAVLDMRMNTEESVSAYNIVNEYSEEELFRIIKEYGEERFARKIAKAIVKQ 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +T ELV +I+ V P M+ ++ G A + FQA+RI VN EL+ L ++
Sbjct: 171 REIEPVKTTLELVKIIKKVIP-MKFQQGGH--PAKKTFQAIRIEVNHELEILNKTIEDGV 227
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRN----IRDDNINETW 410
L GR+ +I+FHSLEDRIVK F +EL N ++ I
Sbjct: 228 KHLNSHGRISIITFHSLEDRIVKNKF---------------KELENPCTCPKEFPICICG 272
Query: 411 IRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++ ++ K++T++P+ PS EE+ N R +S+KLRV Q+I
Sbjct: 273 MKPVV-----KVITRKPLEPSQEEKENNSRSKSSKLRVAQRI 309
>gi|350273661|ref|YP_004884974.1| S-adenosyl-methyltransferase mraW [Rickettsia japonica YH]
gi|348592874|dbj|BAK96835.1| S-adenosyl-methyltransferase mraW [Rickettsia japonica YH]
Length = 307
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 125/340 (36%), Positives = 188/340 (55%), Gaps = 42/340 (12%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHI-GVDVDPSALAKA 174
H+PVML E+L+ S + S++DCT GA G+S AI+ + ++ +D DP+ + +A
Sbjct: 5 HVPVMLNEMLEALSP-KDGESYLDCTFGAGGYSKAILES---CNCYVTALDRDPNVIKRA 60
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+ +G+ ++T+ FA +F +K D I++DLG+SSMQ++
Sbjct: 61 EEIQQN--YGERFDFVETN-FADSFAKLKE-----------KKFDGIVLDLGVSSMQLDI 106
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
+RGFS L DGPLDMRM Q L AE+ +N+ + E+ V+ +YG+E + +IV+
Sbjct: 107 ADRGFSFLHDGPLDMRMSGQG-LSAEEFVNTAEEKELADVIYKYGDERFSRRIAKRIVEY 165
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + STG+L ++++S G R+G I AT+ FQA+RI VNDEL LE L
Sbjct: 166 RKTASIDSTGKLAEIVRSSI----GFRKGKIDPATKTFQAIRIYVNDELGELEQFLVNVK 221
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE--TWIR 412
+ L GRL V+SFHSLEDRIVK F +E++E + +DD + W+
Sbjct: 222 NILKKDGRLVVVSFHSLEDRIVKNFF-------KENSEKPVVRSKYAKDDMTIDPNKWL- 273
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
KI+T + + PS +E LN R RSAKLR + I
Sbjct: 274 --------KIITNKALAPSDKEVGLNIRARSAKLRAAKAI 305
>gi|403386633|ref|ZP_10928690.1| 16S rRNA m(4)C1402 methyltransferase [Clostridium sp. JC122]
Length = 307
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 125/338 (36%), Positives = 180/338 (53%), Gaps = 36/338 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E ++ + +VDCTLG GHSS I++ E IG+D D AL A
Sbjct: 5 HVSVLLDECIEALNIKED-GIYVDCTLGGGGHSSEILKKLSEKGRLIGIDQDKDALKAAN 63
Query: 176 AHLNSLLHGQAHPHLKTHTFA-KNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L K TF NF +IK +L ++ NI + VD ILMDLG+SS Q++N
Sbjct: 64 ERLK---------EYKNTTFVHNNFYNIKEILEKL--NIEK--VDGILMDLGVSSYQLDN 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
+RGFS + D PLDMRMD + SL A +++N + + E+ V++ +GEE + N IV
Sbjct: 111 ADRGFSYMKDAPLDMRMDRENSLSAYNVVNDYSEEELADVIKSFGEERFAKRISNFIVNR 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +T +L D++ + PG + G A R FQA+RI VN EL L ++
Sbjct: 171 R---PIETTLQLADIVMAAIPGKFKKDGGH--PAKRTFQAIRIEVNKELMILNKAIEDSV 225
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
+ L GR+ +I+FHSLEDRIVK F + D +EL N+ I +
Sbjct: 226 EALNSDGRIAIITFHSLEDRIVKNKFKEL-----NDPCNCPKELPFCV---CNKKPIVDL 277
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ +++PI PS EE+ N R RS+KLRV +KI
Sbjct: 278 V--------SRKPIEPSKEEQENNSRSRSSKLRVARKI 307
>gi|260886497|ref|ZP_05897760.1| S-adenosyl-methyltransferase MraW [Selenomonas sputigena ATCC
35185]
gi|330839659|ref|YP_004414239.1| S-adenosyl-methyltransferase MraW [Selenomonas sputigena ATCC
35185]
gi|260863640|gb|EEX78140.1| S-adenosyl-methyltransferase MraW [Selenomonas sputigena ATCC
35185]
gi|329747423|gb|AEC00780.1| S-adenosyl-methyltransferase MraW [Selenomonas sputigena ATCC
35185]
Length = 311
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 127/340 (37%), Positives = 181/340 (53%), Gaps = 36/340 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAII-RAHPELKLHIGVDVDPSALAKA 174
H VM E L + + +++DCTLG AGH+ I R P +L IG+D D +A+ A
Sbjct: 5 HTSVMPEETLAALAV-KPAGTYIDCTLGGAGHARRIADRLSPAGRL-IGLDQDEAAIRAA 62
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+ L A+ + NFR + SVL +++ + VD +L DLG+SS Q++
Sbjct: 63 KERL-------ANVSCRVDVVRSNFRALDSVL----QSLGVTSVDGVLFDLGVSSHQIDT 111
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS + D PLDMRMD L A +++N + +AE+ + R+YGEE + IV A
Sbjct: 112 AERGFSYMQDAPLDMRMDTSRLLSAHEVVNEYDEAELWHIFRDYGEERWAKRIAEFIVAA 171
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRG-RRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
R + +TGELVD++ P +G RR A R+FQA+RI VNDEL L++S+
Sbjct: 172 RQEKPIETTGELVDIVCRAVP--KGVRRAAGGHPAKRIFQAIRIEVNDELGILQASVENA 229
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
LAPGGR+ V++FHSLEDRIVKQ L+ + I +
Sbjct: 230 VHALAPGGRIAVLTFHSLEDRIVKQA------------------LKELARGCICPPGLPV 271
Query: 414 IIQGWNGKI-LTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ G K+ L + PSA E N R +SAKLRV +K+
Sbjct: 272 CVCGHEPKVRLLGKAQKPSAAEAAENPRAKSAKLRVAEKL 311
>gi|257870252|ref|ZP_05649905.1| methyltransferase [Enterococcus gallinarum EG2]
gi|257804416|gb|EEV33238.1| methyltransferase [Enterococcus gallinarum EG2]
Length = 319
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 125/340 (36%), Positives = 176/340 (51%), Gaps = 34/340 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H VML E +D + R +VDCTLG AGHS ++ E D D A+ A+
Sbjct: 6 HYTVMLKETVDGLAI-RPDGIYVDCTLGGAGHSEYLLSQLSEEGHLYAFDQDQKAIDHAK 64
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVD---AILMDLGMSSMQV 232
L + +K+ NFR++K L Q GVD +L DLG+SS Q+
Sbjct: 65 ERLAPYVAKGMVTFIKS-----NFRYLKEALQQ-------QGVDQVSGVLYDLGVSSPQL 112
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ ERGFS D PLDMRMD A+L A +++N + ++ ++ YGEE + +I
Sbjct: 113 DEAERGFSYHQDAPLDMRMDQSAALTAYEVVNQFDYHQLVKIFFRYGEEKFSKQIAREIE 172
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
+ R + +TGELV++I++ P R+ G A R+FQA+RIAVNDEL +E SL
Sbjct: 173 RTRANKPIETTGELVEIIKTAIPAPARRKGGH--PAKRIFQAIRIAVNDELGVIEESLEQ 230
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
D L GR+ VI+FHSLEDRIVK TF + +D I
Sbjct: 231 AIDLLEKNGRISVITFHSLEDRIVKSTFKA---------------YSTPKDVPPGLPIIP 275
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ Q K++T++P+ PS EE N R RSAKLR+ +K+
Sbjct: 276 EEFQPVL-KLITRKPLLPSEEEVSENNRSRSAKLRIAEKM 314
>gi|139437204|ref|ZP_01771364.1| Hypothetical protein COLAER_00343 [Collinsella aerofaciens ATCC
25986]
gi|133776851|gb|EBA40671.1| S-adenosyl-methyltransferase MraW [Collinsella aerofaciens ATCC
25986]
Length = 321
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 136/356 (38%), Positives = 190/356 (53%), Gaps = 45/356 (12%)
Query: 106 ESIIQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVD 165
E I Q+ H PVMLGEVL+ ++ + DCTLG AGHS + E L +GVD
Sbjct: 2 ERGILTQEYRHEPVMLGEVLESLRL-KSGSVVCDCTLGGAGHSVKMAAQVGETGLLLGVD 60
Query: 166 VDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRS---GVDAIL 222
D AL A A L+ + G H LK NF G +DE + + GVD L
Sbjct: 61 QDDMALEAAGARLDREVPGVPHQLLKG-----NF-------GDLDELLCSAEVPGVDGFL 108
Query: 223 MDLGMSSMQVNNPERGFSVLGDGPLDMRMDP-QASLKAEDILNSWPDAEVGRVLREYGEE 281
DLG+SS Q++ P RGFS D PLDMRMDP +L A +++N++ + ++ R+LR YGEE
Sbjct: 109 FDLGVSSPQLDIPGRGFSYNEDAPLDMRMDPGNNTLNAAEVINTYNEHDLARILRVYGEE 168
Query: 282 SNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVND 341
+ +IV+ R + + +TG+ V++I++ P RR G A + FQA+RI VN
Sbjct: 169 KFASQIAREIVRRREQEPIETTGQFVEIIKAGIPAA-ARRHGG-HPAKKSFQAIRIEVNH 226
Query: 342 ELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNI 401
EL LE L A L PGGR+ VIS+HSLEDRIVK +H +E ++G
Sbjct: 227 ELDVLERGLDAATRWLNPGGRICVISYHSLEDRIVK-------NHFKEMSQGC------- 272
Query: 402 RDDNINETWIRQIIQGWNG-----KILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
T +I G K++T++P+ +E N R RSAK+RV Q++
Sbjct: 273 -------TCPPEIPVCVCGNVPILKVITRKPLVAQPDEVERNPRARSAKIRVAQRL 321
>gi|282850409|ref|ZP_06259788.1| S-adenosyl-methyltransferase MraW [Veillonella parvula ATCC 17745]
gi|282579902|gb|EFB85306.1| S-adenosyl-methyltransferase MraW [Veillonella parvula ATCC 17745]
Length = 310
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 127/340 (37%), Positives = 177/340 (52%), Gaps = 35/340 (10%)
Query: 115 SHIPVMLGEVLD-VFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAK 173
+H V+L E +D V ++ + I +VDCTLG AGH+ A+ + IG+D D AL+
Sbjct: 4 NHTSVLLRETVDSVVTNPKGI--YVDCTLGGAGHAHAVGEMLDPEGMIIGLDQDEDALSV 61
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
AR L+ L + T NF ++K L +N VD + DLG+SS Q++
Sbjct: 62 ARQRLSDL-------KCQVLTIPTNFSNLKEAL----QNAGIYEVDGFIFDLGVSSYQLD 110
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
PERGFS + DGPLDMRMD A L AE+I+N + ++ +++R+YGEE + IV+
Sbjct: 111 TPERGFSYMNDGPLDMRMDKDAPLTAEEIVNEYDSEQLLQIIRDYGEERWAKRIVEFIVE 170
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +TGELV +I++ P RQ A R FQA+RI VN EL L S
Sbjct: 171 ARQEKRITTTGELVRIIKNAIPA--KARQDGPHPAKRTFQAIRIEVNRELAILHDSFVDA 228
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
L P G++GVI+FHSLEDRI KQTF + + I +
Sbjct: 229 VSMLKPKGKIGVITFHSLEDRITKQTF------------------KELSTACICPPQLPV 270
Query: 414 IIQGWNGKILTK-RPITPSAEEERLNCRCRSAKLRVIQKI 452
+ + K + I PS E +N R RSAKLRV K+
Sbjct: 271 CVCNHKAVVKAKNKAIEPSIGEIEVNPRARSAKLRVAVKL 310
>gi|165933443|ref|YP_001650232.1| 16S rRNA m(4)C1402 methyltransferase [Rickettsia rickettsii str.
Iowa]
gi|378721536|ref|YP_005286423.1| 16S rRNA m(4)C1402 methyltransferase [Rickettsia rickettsii str.
Colombia]
gi|378722883|ref|YP_005287769.1| 16S rRNA m(4)C1402 methyltransferase [Rickettsia rickettsii str.
Arizona]
gi|378724237|ref|YP_005289121.1| 16S rRNA m(4)C1402 methyltransferase [Rickettsia rickettsii str.
Hauke]
gi|379016215|ref|YP_005292450.1| 16S rRNA m(4)C1402 methyltransferase [Rickettsia rickettsii str.
Brazil]
gi|379018023|ref|YP_005294258.1| 16S rRNA m(4)C1402 methyltransferase [Rickettsia rickettsii str.
Hino]
gi|379712608|ref|YP_005300947.1| 16S rRNA m(4)C1402 methyltransferase [Rickettsia philipii str.
364D]
gi|189082216|sp|B0BYA0.1|RSMH_RICRO RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|262831529|sp|A8GSS6.2|RSMH_RICRS RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|165908530|gb|ABY72826.1| S-adenosyl-methyltransferase [Rickettsia rickettsii str. Iowa]
gi|376324739|gb|AFB21979.1| 16S rRNA m(4)C1402 methyltransferase [Rickettsia rickettsii str.
Brazil]
gi|376326560|gb|AFB23799.1| 16S rRNA m(4)C1402 methyltransferase [Rickettsia rickettsii str.
Colombia]
gi|376327907|gb|AFB25145.1| 16S rRNA m(4)C1402 methyltransferase [Rickettsia rickettsii str.
Arizona]
gi|376329253|gb|AFB26490.1| 16S rRNA m(4)C1402 methyltransferase [Rickettsia philipii str.
364D]
gi|376330589|gb|AFB27825.1| 16S rRNA m(4)C1402 methyltransferase [Rickettsia rickettsii str.
Hino]
gi|376333252|gb|AFB30485.1| 16S rRNA m(4)C1402 methyltransferase [Rickettsia rickettsii str.
Hauke]
Length = 307
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 126/341 (36%), Positives = 189/341 (55%), Gaps = 42/341 (12%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHI-GVDVDPSALAK 173
SH+ VML E+L+ S + S++DCT GA G+S AI+ + ++ +D DP+ + +
Sbjct: 4 SHVSVMLNEMLEALSP-KAGESYLDCTFGAGGYSKAILES---CNCYVTALDRDPNVIKR 59
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
A + +G+ ++T+ FA +F +K D I++DLG+SSMQ++
Sbjct: 60 AEEIQQN--YGERFDFVETN-FADSFAKLKE-----------KKFDGIVLDLGVSSMQLD 105
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
+RGFS L DGPLDMRM Q L AE+ +N+ + E+ V+ +YG+ES + +IV+
Sbjct: 106 IADRGFSFLHDGPLDMRMSGQG-LSAEEFVNAAEEKELADVIYKYGDESFSRRIAKRIVE 164
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
R + STG+L ++++S G R+G I AT+ FQA+RI VNDEL LE L
Sbjct: 165 YRKTARIDSTGKLAEIVRSSI----GFRKGKIDPATKTFQAIRIYVNDELGELEQFLVNV 220
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE--TWI 411
+ L GRL V+SFHSLEDRIVK F +E++E + +DD + W+
Sbjct: 221 KNILKKDGRLVVVSFHSLEDRIVKNFF-------KENSEKPVVRSKYAKDDMTIDPNKWL 273
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
KI+T + + PS +E LN R RSAKLR + I
Sbjct: 274 ---------KIITNKALAPSDKEVGLNIRARSAKLRAAKAI 305
>gi|269798180|ref|YP_003312080.1| S-adenosyl-methyltransferase MraW [Veillonella parvula DSM 2008]
gi|269094809|gb|ACZ24800.1| S-adenosyl-methyltransferase MraW [Veillonella parvula DSM 2008]
Length = 310
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 127/340 (37%), Positives = 176/340 (51%), Gaps = 35/340 (10%)
Query: 115 SHIPVMLGEVLD-VFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAK 173
+H V+L E +D V ++ + I +VDCTLG AGH+ A+ + IG+D D AL+
Sbjct: 4 NHTSVLLHETVDSVVTNPKGI--YVDCTLGGAGHAHAVGEMLDPEGMIIGLDQDEDALSV 61
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
AR L+ L + T NF ++K L N VD + DLG+SS Q++
Sbjct: 62 ARQRLSDL-------KCQVLTIPTNFSNLKEAL----RNAGIYEVDGFIFDLGVSSYQLD 110
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
PERGFS + DGPLDMRMD A L AE+I+N + ++ +++R+YGEE + IV+
Sbjct: 111 TPERGFSYMNDGPLDMRMDKDAPLTAEEIVNEYDSEQLLQIIRDYGEERWAKRIVEFIVE 170
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +TGELV +I++ P RQ A R FQA+RI VN EL L S
Sbjct: 171 ARQEKRITTTGELVRIIKNAIPA--KARQDGPHPAKRTFQAIRIEVNRELAILHDSFVDA 228
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
L P G++GVI+FHSLEDRI KQTF + + I +
Sbjct: 229 VSMLKPKGKIGVITFHSLEDRITKQTF------------------KELSTACICPPQLPM 270
Query: 414 IIQGWNGKILTK-RPITPSAEEERLNCRCRSAKLRVIQKI 452
+ + K + I PS E +N R RSAKLRV K+
Sbjct: 271 CVCNHKAVVKAKNKAIEPSIGEIEVNPRARSAKLRVAVKL 310
>gi|294793912|ref|ZP_06759049.1| S-adenosyl-methyltransferase MraW [Veillonella sp. 3_1_44]
gi|294455482|gb|EFG23854.1| S-adenosyl-methyltransferase MraW [Veillonella sp. 3_1_44]
Length = 311
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 127/340 (37%), Positives = 177/340 (52%), Gaps = 35/340 (10%)
Query: 115 SHIPVMLGEVLD-VFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAK 173
+H V+L E +D V ++ + I +VDCTLG AGH+ A+ + IG+D D AL+
Sbjct: 5 NHTSVLLRETVDSVVTNPKGI--YVDCTLGGAGHAHAVGEMLDPEGMIIGLDQDEDALSV 62
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
AR L+ L + T NF ++K L +N VD + DLG+SS Q++
Sbjct: 63 ARQRLSDL-------KCQVLTIPTNFSNLKEAL----QNAGIYEVDGFIFDLGVSSYQLD 111
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
PERGFS + DGPLDMRMD A L AE+I+N + ++ +++R+YGEE + IV+
Sbjct: 112 TPERGFSYMNDGPLDMRMDKDAPLTAEEIVNEYDSEQLLQIIRDYGEERWAKRIVEFIVE 171
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +TGELV +I++ P RQ A R FQA+RI VN EL L S
Sbjct: 172 ARQEKRITTTGELVRIIKNAIPA--KARQDGPHPAKRTFQAIRIEVNRELAILHDSFVDA 229
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
L P G++GVI+FHSLEDRI KQTF + + I +
Sbjct: 230 VSMLKPKGKIGVITFHSLEDRITKQTF------------------KELSTACICPPQLPV 271
Query: 414 IIQGWNGKILTK-RPITPSAEEERLNCRCRSAKLRVIQKI 452
+ + K + I PS E +N R RSAKLRV K+
Sbjct: 272 CVCNHKAVVKAKNKAIEPSIGEIEVNPRARSAKLRVAVKL 311
>gi|257888481|ref|ZP_05668134.1| methyltransferase [Enterococcus faecium 1,141,733]
gi|431031543|ref|ZP_19490717.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1590]
gi|257824535|gb|EEV51467.1| methyltransferase [Enterococcus faecium 1,141,733]
gi|430564953|gb|ELB04128.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1590]
Length = 319
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 131/340 (38%), Positives = 178/340 (52%), Gaps = 35/340 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHI-GVDVDPSALAKA 174
H VML E +D + + +VDCTLG AGHS ++ + K H+ D D A+ A
Sbjct: 7 HYTVMLKETVDGLNI-KPDGVYVDCTLGGAGHSEYLL-SQLSSKGHLYAFDQDQKAIDHA 64
Query: 175 RAHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
+ L S + G TF K NFR ++ L + + VD IL DLG+SS Q+
Sbjct: 65 KLRLASYVEQGMV-------TFIKANFRELEERLSEYVDK-----VDGILYDLGVSSPQL 112
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ ERGFS D PLDMRMD A L A ++N +P E+ ++ YGEE + +I
Sbjct: 113 DEAERGFSYHQDAPLDMRMDQSAPLTAYHVINEYPYHELVKIFFRYGEEKFSKQIAREIE 172
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
+ R + +TGELV++I+ V P R+ G A R+FQA+RIAVNDEL E+SL
Sbjct: 173 RVRKTKPIQTTGELVEIIKQVIPAPARRKGGH--PAKRIFQAVRIAVNDELGAEETSLEQ 230
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
L GR+ VI+FHSLEDRIVK F +E ++D I
Sbjct: 231 AIRLLKVNGRISVITFHSLEDRIVKSMF---------------KEYSTVQDLPPGLPVIP 275
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
Q K++T++PI PS EE N R RSAKLR+ +KI
Sbjct: 276 DEFQP-ELKVITRKPILPSEEELAENNRSRSAKLRIAEKI 314
>gi|188585922|ref|YP_001917467.1| S-adenosyl-methyltransferase MraW [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|262825152|sp|B2A2G4.1|RSMH_NATTJ RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|179350609|gb|ACB84879.1| S-adenosyl-methyltransferase MraW [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 315
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 122/340 (35%), Positives = 181/340 (53%), Gaps = 34/340 (10%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
+H PVM+ + +++ + VD T+G AGHS II + P + +G+D DP A
Sbjct: 4 NHEPVMIEKTIELLKPE-SAQVIVDGTMGGAGHSLRIINSLPPEGILVGIDQDPDAYEAG 62
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+ SLL + K F NF +IK + E I VD IL+DLG+SS Q++N
Sbjct: 63 K----SLLEAYGN---KAKVFNDNFVNIKHIC----ERIGIHYVDGILLDLGVSSYQLDN 111
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
+RGF+ + PLDMRMD + A +++N++ + ++ ++REYGEE + IVQA
Sbjct: 112 KDRGFTYQENAPLDMRMDKSQKITASEVVNTYSEQKLAEIIREYGEEKWAQRIAQFIVQA 171
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R +++T ELV +I++ P +G R+ A R FQALRI VN EL +L +++
Sbjct: 172 RQDQEINTTQELVKVIKAAIP--KGARKSGPHPAKRTFQALRIHVNGELDSLRTAIQEGI 229
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETW--IR 412
L GR VI+FHSLEDRIVKQ F + + + T I
Sbjct: 230 RLLRGKGRFVVITFHSLEDRIVKQEF------------------KKLAQTCVCPTKLPIC 271
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
Q K+LTK+P+ PS E +N R RSAKLR ++++
Sbjct: 272 QCKGEATVKLLTKKPLLPSQGEIEINPRARSAKLRAVERL 311
>gi|379713675|ref|YP_005302013.1| 16S rRNA m(4)C1402 methyltransferase [Rickettsia massiliae str.
AZT80]
gi|376334321|gb|AFB31553.1| 16S rRNA m(4)C1402 methyltransferase [Rickettsia massiliae str.
AZT80]
Length = 307
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 126/341 (36%), Positives = 189/341 (55%), Gaps = 42/341 (12%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHI-GVDVDPSALAK 173
SH+PVML E+L+ S + S++DCT GA G+S AI+ + ++ +D DP+ + +
Sbjct: 4 SHVPVMLNEMLEALSP-KDGESYLDCTFGAGGYSKAILES---CNCYVTALDRDPNVIKR 59
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
A + +G+ ++T+ FA +F +K D I++DLG+SSMQ++
Sbjct: 60 AEEIQQN--YGERFDFVETN-FADSFAKLKE-----------KNFDGIVLDLGVSSMQLD 105
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
+RGFS L DGPLDMRM Q L AE+ +N+ + E+ V+ +YG+ES + +IV+
Sbjct: 106 IADRGFSFLHDGPLDMRMSGQG-LSAEEFVNTAEEKELADVIYKYGDESFSRRIAKRIVE 164
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
R + STG+L ++++S G R+G I AT+ FQA+RI VNDEL LE L
Sbjct: 165 YRKTARIDSTGKLAEIVRSSI----GFRKGKIDPATKTFQAIRIYVNDELGELEQFLVNV 220
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE--TWI 411
+ L GRL V+SFHSLEDRIVK F +E++E + +DD + W+
Sbjct: 221 KNILKKDGRLVVVSFHSLEDRIVKNFF-------KENSEKPVVRSKYAKDDMTIDPNKWL 273
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
KI+T + + S +E LN R RSAKLR + I
Sbjct: 274 ---------KIITNKALASSDKEVGLNIRARSAKLRAAKAI 305
>gi|416350636|ref|ZP_11680938.1| 16S rRNA m(4)C1402 methyltranserfase [Clostridium botulinum C str.
Stockholm]
gi|338196201|gb|EGO88409.1| 16S rRNA m(4)C1402 methyltranserfase [Clostridium botulinum C str.
Stockholm]
Length = 309
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 125/342 (36%), Positives = 192/342 (56%), Gaps = 40/342 (11%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
+H+PV+L E +D + +VDCTLG AGHSS I++ + IG+D D +AL A
Sbjct: 4 NHVPVLLEETIDSLNIKED-GIYVDCTLGGAGHSSYILKRLSKKGKLIGIDQDLNALKAA 62
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+ L + + H NF ++ SVL ++ NI + VD ILMDLG+SS Q++
Sbjct: 63 KERLKNY-DNVIYVH-------NNFYNLASVLDEL--NIEK--VDGILMDLGVSSYQLDT 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS + D LDMRM+ + S+ A +++N + + E+ R+++EYGEE + IV+
Sbjct: 111 AERGFSYMQDAVLDMRMNTEESVSAYNVVNEYSEEELFRIIKEYGEERFARKIAKAIVKQ 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +T ELV +I+ V P M+ ++ G A + FQA+RI VN EL+ L ++
Sbjct: 171 REIEPVKTTLELVKIIKKVIP-MKFQQGGH--PAKKTFQAIRIEVNHELEILNKTIEDGV 227
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRN----IRDDNINETW 410
L GR+ VI+FHSLEDRIVK F +EL N ++ I
Sbjct: 228 KHLNSHGRISVITFHSLEDRIVKNKF---------------KELENPCTCPKEFPICICG 272
Query: 411 IRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++ ++ K++T++P+ PS EE+ N R +S+KLRV Q+I
Sbjct: 273 MKPVV-----KVITRKPLEPSQEEKENNSRSKSSKLRVAQRI 309
>gi|294792047|ref|ZP_06757195.1| S-adenosyl-methyltransferase MraW [Veillonella sp. 6_1_27]
gi|294457277|gb|EFG25639.1| S-adenosyl-methyltransferase MraW [Veillonella sp. 6_1_27]
Length = 311
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 127/340 (37%), Positives = 177/340 (52%), Gaps = 35/340 (10%)
Query: 115 SHIPVMLGEVLD-VFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAK 173
+H V+L E +D V ++ + I +VDCTLG AGH+ A+ + IG+D D AL+
Sbjct: 5 NHTSVLLRETVDSVVTNPKGI--YVDCTLGGAGHAHAVGEILDPEGMIIGLDQDEDALSV 62
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
AR L+ L + T NF ++K L +N VD + DLG+SS Q++
Sbjct: 63 ARQRLSDL-------KCQVLTIPTNFSNLKDAL----QNAGIYEVDGFIFDLGVSSYQLD 111
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
PERGFS + DGPLDMRMD A L AE+I+N + ++ +++R+YGEE + IV+
Sbjct: 112 TPERGFSYMNDGPLDMRMDKDAPLTAEEIVNEYDSEQLLQIIRDYGEERWAKRIVEFIVE 171
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +TGELV +I++ P RQ A R FQA+RI VN EL L S
Sbjct: 172 ARQEKRITTTGELVRIIKNAIPA--KARQDGPHPAKRTFQAIRIEVNRELAILHDSFVDA 229
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
L P G++GVI+FHSLEDRI KQTF + + I +
Sbjct: 230 VSMLKPKGKIGVITFHSLEDRITKQTF------------------KELSTACICPPQLPV 271
Query: 414 IIQGWNGKILTK-RPITPSAEEERLNCRCRSAKLRVIQKI 452
+ + K + I PS E +N R RSAKLRV K+
Sbjct: 272 CVCNHKAVVKAKNKAIEPSIGEIEVNPRARSAKLRVAVKL 311
>gi|194337867|ref|YP_002019661.1| S-adenosyl-methyltransferase MraW [Pelodictyon phaeoclathratiforme
BU-1]
gi|262824772|sp|B4SHF1.1|RSMH_PELPB RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|194310344|gb|ACF45044.1| S-adenosyl-methyltransferase MraW [Pelodictyon phaeoclathratiforme
BU-1]
Length = 332
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 132/344 (38%), Positives = 180/344 (52%), Gaps = 36/344 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPEL-----KLHIGVDVDPSA 170
H PV++ EV+ I +VD TLG GHSSA++RA + L IG+D D +A
Sbjct: 9 HEPVLVNEVVAFLVRKPGI--YVDGTLGGGGHSSAMLRALFDAGFLAGSLLIGIDQDDAA 66
Query: 171 LAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQI-DENILRSGVDAILMDLGMSS 229
L A L T NF + ++ I E L V IL+DLG+SS
Sbjct: 67 LRVAGETLKEFAA-------STVLVKGNFCDMGGLIASICAEKGLEPKVMGILLDLGVSS 119
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
Q+N P+RGFS L +GPLDMRMD AS A DI+N + + E+ R+ YGEE +
Sbjct: 120 FQINTPDRGFSYLREGPLDMRMDSNASRSAADIVNGYDEQELARLFYRYGEEPRSRSIAR 179
Query: 290 KIVQARLR-GGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLES 348
IV R + G + T EL +I+ G + IKT +RVFQALRI VN EL L
Sbjct: 180 AIVAYRQKHGAVTYTQELAAIIRGNAHG----GEKVIKTLSRVFQALRIEVNAELDVLRQ 235
Query: 349 SLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE 408
+L+ DCL GR+ +IS+HSLEDRIVK+ F E+ R+ D
Sbjct: 236 ALYDGIDCLDETGRMAIISYHSLEDRIVKRVF--------------AEKARS--DWGPKG 279
Query: 409 TWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+R+ + + +T++P+ + +E LN R RSAKLRVI+KI
Sbjct: 280 VGLREPLSWGSVAPVTRKPLIAAPDEIALNSRARSAKLRVIEKI 323
>gi|410724138|ref|ZP_11363337.1| S-adenosyl-methyltransferase MraW [Clostridium sp. Maddingley
MBC34-26]
gi|410602424|gb|EKQ56904.1| S-adenosyl-methyltransferase MraW [Clostridium sp. Maddingley
MBC34-26]
Length = 310
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 123/341 (36%), Positives = 185/341 (54%), Gaps = 33/341 (9%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
+ H+ V+L E +D + +VDCTLG AGHSS I++ + +G+D D AL
Sbjct: 2 EFKHVSVLLNECIDALNIKEN-GIYVDCTLGGAGHSSEIVKHLSRDGMLVGIDQDKDALK 60
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
A+ L + + H+ NF I+++L +D + VD ILMDLG+SS Q+
Sbjct: 61 AAKERLKDFDNVKY-----VHS---NFYDIENILNNLDID----KVDGILMDLGVSSYQL 108
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ RGFS + D LDMRM+ L A +++N++ + E+ +++++YGEE + N IV
Sbjct: 109 DEASRGFSYMQDADLDMRMNRDNDLSAYEVVNNYSEDELYKIIKDYGEERFAKRIANFIV 168
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
R+ + +T ELVD+I++ P R RR+G A R FQA+RI VN ELK L ++
Sbjct: 169 NRRVEKPIATTFELVDIIKAAIPA-RMRREGP-HPAKRTFQAIRIEVNSELKILNKTIED 226
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
+ L GGR+ +I+FHSLEDRIVK F EL N N + +
Sbjct: 227 GVNKLNKGGRMAIITFHSLEDRIVKLKF---------------RELEN--PCNCPKEFPI 269
Query: 413 QIIQGWN-GKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
I K+++K+ I P+ E N R RSAKLR+I+K+
Sbjct: 270 CICGKLPLVKVISKKGIEPTKNEIEENPRSRSAKLRIIEKL 310
>gi|340750587|ref|ZP_08687426.1| ribosomal RNA small subunit methyltransferase H [Fusobacterium
mortiferum ATCC 9817]
gi|229420214|gb|EEO35261.1| ribosomal RNA small subunit methyltransferase H [Fusobacterium
mortiferum ATCC 9817]
Length = 313
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 117/339 (34%), Positives = 179/339 (52%), Gaps = 37/339 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HIPV+ E +D ++ ++DCTLG GHS I++ + I +D D A+ A+
Sbjct: 9 HIPVLYRECIDNLVINKD-GVYLDCTLGGGGHSEGILKELSDKGHLISIDQDQQAIDFAK 67
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L +G+ K F NF ++ VL + VD ILMD+G+SS Q+++P
Sbjct: 68 KRLEK--YGK-----KWQVFKNNFENLDMVLYMAGYD----KVDGILMDIGVSSTQLDDP 116
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D LDMRM+ L A +++N +P+ ++ +++ EYGEE N + I +AR
Sbjct: 117 ERGFSYRYDTRLDMRMNRSNPLSAYEVVNEYPEEKLAKIIFEYGEERNARKIAKFICEAR 176
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +TGELV +I+ P R ++ A + FQA+RI VN EL+ LE ++ D
Sbjct: 177 TEKNIETTGELVAIIKRAYP-ERAQKH----PAKKTFQAIRIEVNRELEVLEKAIDKAVD 231
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L GGRLG+I+FHSLEDR+VK F +++ + +
Sbjct: 232 SLKVGGRLGIITFHSLEDRLVKTKF------------------KDLATACKCPPGLPICV 273
Query: 416 QGWNGKI--LTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
G K+ +T++PI P EE N R S+KLRV+++I
Sbjct: 274 CGGKAKVKLITRKPIVPEGEEVEFNNRAHSSKLRVVERI 312
>gi|315639624|ref|ZP_07894764.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Enterococcus italicus DSM 15952]
gi|315484585|gb|EFU75041.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Enterococcus italicus DSM 15952]
Length = 318
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 123/319 (38%), Positives = 176/319 (55%), Gaps = 33/319 (10%)
Query: 137 FVDCTLGAAGHSSAII-RAHPELKLHIGVDVDPSALAKARAHLNSLL-HGQAHPHLKTHT 194
+VDCTLG AGHS ++ + P+ L+ D D AL A+ L S + GQ T
Sbjct: 25 YVDCTLGGAGHSEYLLSQLGPDGHLY-AFDQDQKALDFAKQRLQSFVDKGQV-------T 76
Query: 195 FAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDP 253
F K NFR +KS L ++D +++ VD IL DLG+SS Q++ ERGFS D PLDMRMD
Sbjct: 77 FIKSNFRELKSKLAELD--VMK--VDGILYDLGVSSPQLDEAERGFSYHQDAPLDMRMDQ 132
Query: 254 QASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSV 313
AS A D++N++ E+ ++ YGEE + +I + R + +T ELV++I++
Sbjct: 133 SASFSAHDLVNTYSYNELVKIFFRYGEEKFSKQIAREIERVRANQPIETTSELVEIIKTA 192
Query: 314 TPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLED 373
P R+ G A R+FQA+RIAVNDEL +E SL + LA GR+ VI+FHSLED
Sbjct: 193 IPAPARRKGGH--PAKRIFQAIRIAVNDELGAVEESLEQAIELLAIHGRISVITFHSLED 250
Query: 374 RIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAE 433
R+VK F +E +++ I Q ++ ++PIT S
Sbjct: 251 RLVKNMF---------------KEYSQVKELPPGLPVIPDEYQPML-TVINRKPITASEL 294
Query: 434 EERLNCRCRSAKLRVIQKI 452
E N R RSAKLR+++K+
Sbjct: 295 ELEENNRSRSAKLRIVEKV 313
>gi|358060552|ref|ZP_09147631.1| S-adenosyl-methyltransferase MraW [Staphylococcus simiae CCM 7213]
gi|357256574|gb|EHJ06930.1| S-adenosyl-methyltransferase MraW [Staphylococcus simiae CCM 7213]
Length = 311
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 126/335 (37%), Positives = 180/335 (53%), Gaps = 30/335 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI VML E +D + + + ++DCTLG AGH+ ++ + I +D D +A+ A+
Sbjct: 4 HISVMLNETID-YLNVKEDGVYIDCTLGGAGHALYLLNQLSDEGKLIAIDQDQTAIDNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L LH H NFR +K++L + NI + VD I DLG+SS Q++ P
Sbjct: 63 EVLKDHLHKVVFVH-------SNFRELKNILNNL--NIEK--VDGIYYDLGVSSPQLDIP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D LDMRMD SL A +++N W + ++ YGEE + +I R
Sbjct: 112 ERGFSYHHDATLDMRMDQTQSLSAYEVVNEWSYEALVKIFYRYGEEKFSKQVARRIEAHR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +T ELVD+I+ P + RR+G A R+FQALRIAVNDEL E SL D
Sbjct: 172 EQQPITTTLELVDIIKEGIPA-KARRKGG-HPAKRIFQALRIAVNDELAAFEDSLEQAID 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
+ GGR+ VI+FHSLEDR+ KQ F ++ E E R + I E + ++
Sbjct: 230 LVDVGGRISVITFHSLEDRLCKQMF--------QEYEKGPEVPRGL--PIIPEEYTPKL- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
K + ++PIT + E+ N R RSAKLRV +
Sbjct: 279 -----KRVNRKPITATDEDLDDNNRARSAKLRVAE 308
>gi|310659206|ref|YP_003936927.1| S-adenosyl-dependent methyltransferase activity on membrane-located
substrates [[Clostridium] sticklandii]
gi|308825984|emb|CBH22022.1| S-adenosyl-dependent methyltransferase activity on membrane-located
substrates [[Clostridium] sticklandii]
Length = 310
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 128/339 (37%), Positives = 185/339 (54%), Gaps = 35/339 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG AGHS I++ KL I D D +A++ A+
Sbjct: 5 HVTVLLNEAVDILDI-KPDGIYVDGTLGGAGHSLEIVKKLTSGKL-ICFDQDINAISAAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L + KT NF +++ L ++ +D L+DLG+SS Q++ P
Sbjct: 63 EKLKDFMD-------KTILVHSNFENLREELNKLG----IETIDGFLVDLGVSSHQLDVP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHL-LQNKIVQA 294
ERGFS + D PLDMRMD A L A D++N++ +AE+ RV+++YGEE NW + IV+
Sbjct: 112 ERGFSYMQDAPLDMRMDNNAELSAYDVVNTYSEAELKRVIKDYGEE-NWSARIAKIIVER 170
Query: 295 RLRGGLHSTGELVDLIQSVTP-GMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
R + +T ELVD I++ P MR Q A R FQA+RI VN EL +E +L A
Sbjct: 171 RTTMPIRTTFELVDAIKAAIPKKMRDENQ---HPAKRTFQAIRIEVNRELDVIEKTLLAA 227
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
D + GG L VI+FHSLEDRIVK F + + E I + +Q
Sbjct: 228 VDMMNEGGVLAVITFHSLEDRIVKNVFKKL----QYSCTCPPEFPVCICNS-------KQ 276
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+++ I+T++PI PS E +N R RSAKLR +K+
Sbjct: 277 VVE-----IITRKPILPSENEVEMNPRSRSAKLRAARKL 310
>gi|374583036|ref|ZP_09656130.1| S-adenosyl-methyltransferase MraW [Desulfosporosinus youngiae DSM
17734]
gi|374419118|gb|EHQ91553.1| S-adenosyl-methyltransferase MraW [Desulfosporosinus youngiae DSM
17734]
Length = 310
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 131/337 (38%), Positives = 174/337 (51%), Gaps = 31/337 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D + +VDCTLG AGHS I+ I D D A+ A+
Sbjct: 5 HVTVLLEETVDSVVRDPS-GRYVDCTLGGAGHSQRILAKLGASGRLICFDQDAQAIGHAK 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
+ GQ + +NF ++ L ++D V+ I+ DLG+SS Q++
Sbjct: 64 E-----VFGQDE---RVILINRNFELLEDTLRELD----LLPVNGIIFDLGVSSPQLDEA 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS + D PLDMRMDP L A +I+NSW + E+ R++ YGEE + IV+ R
Sbjct: 112 ERGFSYMQDAPLDMRMDPAGVLNAREIVNSWTEEELARLIWNYGEEKWSKRIAQFIVRTR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
L +TG+LV I++ P RR G A R FQA+RI VNDEL L+ L
Sbjct: 172 QDHPLETTGDLVQAIKAAVPAA-VRRSG-PHPAKRTFQAIRIVVNDELGVLDRVLDQALR 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
CL GGR+GVI+FHSLEDRIVK S + R E I +
Sbjct: 230 CLDHGGRVGVITFHSLEDRIVKDRMKSWLG----------------RCTCPPELPICRCN 273
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
K+LT++PI PSAEE N R RSAKLRV +KI
Sbjct: 274 AQTLAKVLTRKPILPSAEEVEENPRSRSAKLRVAEKI 310
>gi|157964706|ref|YP_001499530.1| S-adenosyl-methyltransferase MraW [Rickettsia massiliae MTU5]
gi|167011838|sp|A8F247.1|RSMH_RICM5 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|157844482|gb|ABV84983.1| S-adenosyl-methyltransferase MraW [Rickettsia massiliae MTU5]
Length = 307
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 126/341 (36%), Positives = 189/341 (55%), Gaps = 42/341 (12%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHI-GVDVDPSALAK 173
SH+PVML E+L+ S + S++DCT GA G+S AI+ + ++ +D DP+ + +
Sbjct: 4 SHVPVMLNEMLEALSP-KDGESYLDCTFGAGGYSKAILES---CNCYVTALDRDPNVIKR 59
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
A + +G+ ++T+ FA +F +K D I++DLG+SSMQ++
Sbjct: 60 AEEIQQN--YGERFDFVETN-FADSFAKLKE-----------KKFDGIVLDLGVSSMQLD 105
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
+RGFS L DGPLDMRM Q L AE+ +N+ + E+ V+ +YG+ES + +IV+
Sbjct: 106 IADRGFSFLHDGPLDMRMSGQG-LSAEEFVNTAEEKELADVIYKYGDESFSRRIAKRIVE 164
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
R + STG+L ++++S G R+G I AT+ FQA+RI VNDEL LE L
Sbjct: 165 YRKTARIDSTGKLAEIVRSSI----GFRKGKIDPATKTFQAIRIYVNDELGELEQFLVNV 220
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE--TWI 411
+ L GRL V+SFHSLEDRIVK F +E++E + +DD + W+
Sbjct: 221 KNILKKDGRLVVVSFHSLEDRIVKNFF-------KENSEKPVVRSKYAKDDMTIDPNKWL 273
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
KI+T + + S +E LN R RSAKLR + I
Sbjct: 274 ---------KIITNKALASSDKEVGLNIRARSAKLRAAKAI 305
>gi|304439975|ref|ZP_07399868.1| S-adenosyl-methyltransferase MraW [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|304371467|gb|EFM25080.1| S-adenosyl-methyltransferase MraW [Peptoniphilus duerdenii ATCC
BAA-1640]
Length = 314
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 125/342 (36%), Positives = 176/342 (51%), Gaps = 40/342 (11%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HIPV+ E ++ + R ++DCT+G AGHSS I++ L +G+D D AL +
Sbjct: 6 HIPVLFNETIEGLNI-RENHIYMDCTIGGAGHSSEILKRLNGTGLLVGIDQDEFALYTSE 64
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG---VDAILMDLGMSSMQV 232
L + NF+ + EN+ G VD IL+DLG+SS Q
Sbjct: 65 KRLREI--------------GDNFKLFNNNFELFRENLDSLGISKVDGILLDLGVSSHQF 110
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ RGFS D PLDMRM+ + A+DI+N++ + ++ EYGEE + IV
Sbjct: 111 DEASRGFSYNYDAPLDMRMNKSTRITAKDIVNTYSKEALMKIFYEYGEEKWSKRVAEFIV 170
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
+AR + +T ELV++I++ P +G R G A R+FQALRI NDEL L SL
Sbjct: 171 KARNSKTIETTFELVEIIKAAIP--KGARSGGPHPAKRIFQALRIETNDELGVLRRSLGD 228
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNI--NETW 410
+ L PGGR+ VISFHSLEDRIVK TF + D I E
Sbjct: 229 MIESLNPGGRICVISFHSLEDRIVKDTF------------------KYYYLDCICPPEVP 270
Query: 411 IRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ + +I+T++PIT S EE +N R SAKLR+ +K+
Sbjct: 271 VCTCNKKREIEIITRKPITASKEELAINNRAHSAKLRIAEKL 312
>gi|222151001|ref|YP_002560154.1| S-adenosyl-methyltransferase MraW [Macrococcus caseolyticus
JCSC5402]
gi|263456379|sp|B9EB47.1|RSMH_MACCJ RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|222120123|dbj|BAH17458.1| S-adenosyl-methyltransferase MraW [Macrococcus caseolyticus
JCSC5402]
Length = 310
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 127/338 (37%), Positives = 181/338 (53%), Gaps = 37/338 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D + +VDCTLG AGHS +++ E L I +D D +A+ A
Sbjct: 4 HVTVLLEETVDQLNIDPN-GIYVDCTLGGAGHSLYLVKQLQEGHL-ISIDQDQTAIDNAH 61
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L +L TF K NFR++ +L +D VD IL DLG+SS Q++
Sbjct: 62 IILKD--------YLDKVTFVKDNFRNLSDILAHLD----IQKVDGILYDLGVSSPQLDV 109
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS + LDMRMD +L A +++N+WP ++ + YGEE + KI
Sbjct: 110 GERGFSYHQEAKLDMRMDQTQTLSAYEVVNTWPYEKLVSIFFRYGEEKFSKQIARKIEAE 169
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +T ELV++I++ P RR G A RVFQA+RIAVNDEL ESS+
Sbjct: 170 RELKPIETTTELVEIIKAAIPA-PARRTGG-HPAKRVFQAIRIAVNDELGAFESSIEQAI 227
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
D + PGGR+ VI+FHSLEDR+ KQ F +E ++G + + +
Sbjct: 228 DSVKPGGRISVITFHSLEDRLCKQVF-------QEYSKGPD-----------IPRGLPVV 269
Query: 415 IQGWNGKI--LTKRPITPSAEEERLNCRCRSAKLRVIQ 450
+ K+ +T++PIT S EE N R RSAKLRV++
Sbjct: 270 PPEYQPKLKKITRKPITSSNEELEHNNRARSAKLRVVE 307
>gi|284048645|ref|YP_003398984.1| S-adenosyl-methyltransferase MraW [Acidaminococcus fermentans DSM
20731]
gi|283952866|gb|ADB47669.1| S-adenosyl-methyltransferase MraW [Acidaminococcus fermentans DSM
20731]
Length = 309
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/316 (37%), Positives = 165/316 (52%), Gaps = 31/316 (9%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
+VDCTLG GHS I L IG+D D A+A A L +
Sbjct: 25 YVDCTLGGGGHSHRITELLDPEGLLIGIDQDEDAIAAATERLKD-------ARCQVKIVH 77
Query: 197 KNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQAS 256
NFR++ +L Q+ VD IL DLG+SS Q++ PERGFS + DGPLDMRMD +AS
Sbjct: 78 NNFRNLDQILDQLG----IPQVDGILFDLGVSSYQLDTPERGFSYMHDGPLDMRMDQEAS 133
Query: 257 LKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPG 316
L AE ++N + + ++ ++ +YGEE + IV AR + +TGELV +I++ P
Sbjct: 134 LTAEQVVNRYKEDDLAGLIYKYGEERWAKRIAQFIVAARKEHPIRTTGELVHIIKAAIP- 192
Query: 317 MRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIV 376
+G RQ A R FQA+RI VNDELK L++++ A L GG +GVI+FHSLEDRI+
Sbjct: 193 -KGARQDGPHPAKRTFQAIRIEVNDELKILDATMEAAVHHLKSGGHIGVITFHSLEDRII 251
Query: 377 KQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEER 436
KQ F + ++ I + + G ++ + TP E
Sbjct: 252 KQAF------------------KRLQRGCICPPELPVCVCGRKPELKKLKEFTPGEAELA 293
Query: 437 LNCRCRSAKLRVIQKI 452
N R RSA+LR KI
Sbjct: 294 ENPRARSARLRGAVKI 309
>gi|199598136|ref|ZP_03211558.1| SAM-dependent methyltransferase for cell envelope biogenesis
[Lactobacillus rhamnosus HN001]
gi|418070498|ref|ZP_12707773.1| 16S rRNA m(4)C1402 methyltransferase [Lactobacillus rhamnosus
R0011]
gi|421769080|ref|ZP_16205789.1| rRNA small subunit methyltransferase H [Lactobacillus rhamnosus
LRHMDP2]
gi|421771343|ref|ZP_16208003.1| rRNA small subunit methyltransferase H [Lactobacillus rhamnosus
LRHMDP3]
gi|423077653|ref|ZP_17066345.1| S-adenosyl-methyltransferase MraW [Lactobacillus rhamnosus ATCC
21052]
gi|199590897|gb|EDY98981.1| SAM-dependent methyltransferase for cell envelope biogenesis
[Lactobacillus rhamnosus HN001]
gi|357539918|gb|EHJ23935.1| 16S rRNA m(4)C1402 methyltransferase [Lactobacillus rhamnosus
R0011]
gi|357553367|gb|EHJ35117.1| S-adenosyl-methyltransferase MraW [Lactobacillus rhamnosus ATCC
21052]
gi|411185476|gb|EKS52604.1| rRNA small subunit methyltransferase H [Lactobacillus rhamnosus
LRHMDP2]
gi|411185929|gb|EKS53055.1| rRNA small subunit methyltransferase H [Lactobacillus rhamnosus
LRHMDP3]
Length = 313
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 121/317 (38%), Positives = 176/317 (55%), Gaps = 30/317 (9%)
Query: 136 SFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTF 195
++VD TLG GH+ I+ +L I D D +A+A + +L P L
Sbjct: 25 TYVDATLGRGGHTRQILNQLTNGRL-IAFDQDEAAIAAVKRQFGTL-----PPQLTL--V 76
Query: 196 AKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQA 255
+NFR + + L +D +R VD +L DLG+SS Q ++ +RGFS D PLDMRMD +
Sbjct: 77 HRNFRDLSAALADLD---IRQ-VDGVLYDLGVSSPQFDDSKRGFSYRFDAPLDMRMDQRQ 132
Query: 256 SLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTP 315
+L A+ I+N WP AE+ R+ YGEE + +I QAR + + +T +LV+LI++ P
Sbjct: 133 TLDAKTIVNEWPYAELVRIFSRYGEEHFSKQIARRIEQARAQAPITTTFQLVELIKAGIP 192
Query: 316 GMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRI 375
+ RR G A +VFQA+RIAVNDEL LE+SL + GGR+ VI+F SLEDR+
Sbjct: 193 A-KARRTGG-HPAKKVFQAIRIAVNDELSALEASLEQALKLINVGGRISVITFQSLEDRL 250
Query: 376 VKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEE 435
VK F +E+ ++D + + Q + +++ ++PI PSA E
Sbjct: 251 VKTMF---------------KEVSTVQDVPRGLPVVPEAAQP-HYQLVNRKPILPSAAEL 294
Query: 436 RLNCRCRSAKLRVIQKI 452
N R SAKLRVI+KI
Sbjct: 295 AENHRAHSAKLRVIEKI 311
>gi|406988898|gb|EKE08746.1| Ribosomal RNA small subunit methyltransferase H, partial
[uncultured bacterium]
Length = 249
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 121/303 (39%), Positives = 158/303 (52%), Gaps = 55/303 (18%)
Query: 149 SAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQ 208
AI+ AHPE+ +IGVD DP AL A L + L +++K + +
Sbjct: 1 QAILTAHPEIVRYIGVDRDPKALELAGERLKEF---EDRVELWHGSYSKQIQEL------ 51
Query: 209 IDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPD 268
VDA L+D+G+SSMQ + ERGFS GD PLDMRM+P L AE+I+N + +
Sbjct: 52 -------DHVDAFLIDVGVSSMQFDEIERGFSFRGDAPLDMRMNPDDILTAEEIVNRYSE 104
Query: 269 AEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTA 328
E+ R+ EYGEE + IV+AR + L +T ELV++++ V +G + A
Sbjct: 105 KELARIFFEYGEERRSRQVAQAIVEARRKKRLRTTQELVEVVRPVAT------RGKLHPA 158
Query: 329 TRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNR 388
T +FQALRI VNDEL LE L + L GRL ISFHSLEDRIVK
Sbjct: 159 TLIFQALRIVVNDELGELERGLKGAIERLNSQGRLAAISFHSLEDRIVKNVL-------- 210
Query: 389 EDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRV 448
DA +EEL +LTK+PI P+ EE RLN R RSAKLR
Sbjct: 211 RDA---KEEL----------------------TVLTKKPIEPTREEMRLNLRSRSAKLRA 245
Query: 449 IQK 451
+K
Sbjct: 246 AEK 248
>gi|422410296|ref|ZP_16487257.1| S-adenosyl-methyltransferase MraW [Listeria monocytogenes FSL
F2-208]
gi|313607742|gb|EFR83963.1| S-adenosyl-methyltransferase MraW [Listeria monocytogenes FSL
F2-208]
Length = 312
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 130/340 (38%), Positives = 177/340 (52%), Gaps = 36/340 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D+ ++ +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 4 HETVLLHETVDMLEV-KSDGIYVDATLGGAGHSEYLLNKLNEKGHLFAFDQDQTAIDNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L + TF K NFR +K L + I VD IL DLG+SS Q++
Sbjct: 63 IKLAD--------YSDKVTFIKANFRDMKEALNE--RGI--EAVDGILYDLGVSSPQLDE 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS D LDMRMD + L A+ ++N W ++ R+ +YGEE + +I +
Sbjct: 111 RERGFSYHQDAALDMRMDQEQELTAKTVVNEWSYQDLIRIFFQYGEEKFSKQIAREIERR 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +TGELVD+I++ P R+ G R FQA+RIAVNDEL +E SL
Sbjct: 171 REVKPIETTGELVDIIKTAIPAPARRKGGH--PGKRTFQAIRIAVNDELGAVEDSLEKAL 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNINETWIR 412
L PGGR+ VI+FHSLEDRI KQ F +E +G + L I D+
Sbjct: 229 TLLKPGGRISVITFHSLEDRITKQLF-------QEATKGPDLPPGLPVIPDE-------- 273
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ K+ T++PI PS EE N R RSAKLRVI+KI
Sbjct: 274 ---YKPDFKLATRKPIVPSEEELEQNNRARSAKLRVIEKI 310
>gi|239826514|ref|YP_002949138.1| S-adenosyl-methyltransferase MraW [Geobacillus sp. WCH70]
gi|263455972|sp|C5D8L5.1|RSMH_GEOSW RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|239806807|gb|ACS23872.1| S-adenosyl-methyltransferase MraW [Geobacillus sp. WCH70]
Length = 310
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 132/340 (38%), Positives = 177/340 (52%), Gaps = 36/340 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + +VDCTLG GHS ++ E D D A+ A+
Sbjct: 4 HTTVLLKEAVDGLHI-KPDGIYVDCTLGGGGHSEYLLSQLSEDGRLFAFDQDDMAIEYAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L + K TF + NFR + L + R VD IL DLG+SS Q++
Sbjct: 63 KRLAR--------YEKQVTFIRRNFRFLAEELTA--RGVHR--VDGILFDLGVSSPQLDT 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
PERGFS D PLDMRM+ + SL A DI+N WP E+ + YGEE + KI +
Sbjct: 111 PERGFSYHHDAPLDMRMNREQSLTAYDIVNHWPYEELVHIFFHYGEEKFSKQVARKIEEV 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +TG+LVD+I+ P RR G A R+FQA+RIAVNDEL+ + ++
Sbjct: 171 RKEKRIETTGQLVDIIKEAIPAP-ARRSGG-HPAKRIFQAIRIAVNDELQAFKEAITQAI 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNINETWIR 412
D L GGR+ VI+FHSLEDRI K F +E ++G + L I D R
Sbjct: 229 DLLKSGGRISVITFHSLEDRICKVAF-------KEASQGPQLPPGLPLIPDQ------YR 275
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ KI+TK+PI PS EE N R RSAKLR+ +K+
Sbjct: 276 PAL-----KIITKKPIVPSEEEIEHNHRARSAKLRIAEKL 310
>gi|302874623|ref|YP_003843256.1| S-adenosyl-methyltransferase MraW [Clostridium cellulovorans 743B]
gi|307690766|ref|ZP_07633212.1| S-adenosyl-methyltransferase MraW [Clostridium cellulovorans 743B]
gi|302577480|gb|ADL51492.1| S-adenosyl-methyltransferase MraW [Clostridium cellulovorans 743B]
Length = 311
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 126/343 (36%), Positives = 187/343 (54%), Gaps = 43/343 (12%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E ++ S + +VDCTLG AGHS I++ IG+D D +A+ A+
Sbjct: 5 HVSVLLEECIEGLSI-KPDGIYVDCTLGGAGHSFEIVKQLTSEGRLIGIDQDTNAINAAK 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L + + H NF +I G+I EN+ VD ILMDLG+SS Q++
Sbjct: 64 EKLKDY-NNVTYVH-------DNFHNI----GEILENLNIDKVDGILMDLGVSSHQLDVA 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS + D PLDMRM+ + A DI+N++ + ++ +++R+YGEE + + IV+ R
Sbjct: 112 ERGFSYMKDAPLDMRMNQERDFSAYDIVNTYSEEQLFKIIRDYGEEKFAKRIASFIVKNR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +T +LV++I++ P + RR+G A R FQA+RI VN EL+ L+ +++ D
Sbjct: 172 NEKTIETTFQLVEIIKNAIPA-KARREGP-HPAKRTFQAIRIEVNKELEILDKAINDGID 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNIN------ET 409
LA GR+ +I+FHSLEDRIVK NI + N E
Sbjct: 230 KLALDGRICIITFHSLEDRIVK----------------------NIYKEQANPCTCPKEF 267
Query: 410 WIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
I + KI++++PI SAEE N R RSAKLRV +KI
Sbjct: 268 PICICNRKPKVKIISRKPIEASAEELEYNPRSRSAKLRVAEKI 310
>gi|239947593|ref|ZP_04699346.1| S-adenosyl-methyltransferase MraW [Rickettsia endosymbiont of
Ixodes scapularis]
gi|241068474|ref|XP_002408444.1| S-adenosyl-methyltransferase mraw, putative [Ixodes scapularis]
gi|215492432|gb|EEC02073.1| S-adenosyl-methyltransferase mraw, putative [Ixodes scapularis]
gi|239921869|gb|EER21893.1| S-adenosyl-methyltransferase MraW [Rickettsia endosymbiont of
Ixodes scapularis]
Length = 307
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/341 (36%), Positives = 190/341 (55%), Gaps = 42/341 (12%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHI-GVDVDPSALAK 173
SH+ VML E+L+ S + S++DCT GA G+S AI+ ++ +I +D DP+ + +
Sbjct: 4 SHVSVMLNEMLEALSP-KDGESYLDCTFGAGGYSKAILESYD---CYITALDRDPNVIKR 59
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
A + +G+ ++T+ FA +F +K + D I++DLG+SSMQ++
Sbjct: 60 AEEIKQN--YGERFDFIETN-FADSFTKLK-----------KKKFDGIVLDLGVSSMQLD 105
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
+RGFS L DGPLDMRM Q L AE+ +N+ + E+ V+ +YG+ES + +IV+
Sbjct: 106 IADRGFSFLHDGPLDMRMSGQG-LNAEEFVNTAEEKELADVIYKYGDESFSRRIARRIVE 164
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
R + ST +L +++++ G R+G I AT+ FQA+RI +NDEL LE L
Sbjct: 165 YRKTARIDSTDKLAEIVRNSI----GFRKGKIDPATKTFQAIRIYINDELGELERFLANV 220
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNI--NETWI 411
+ L GRL V+SFHSLEDRIVK F +E++E + +DD + W+
Sbjct: 221 KNILKKDGRLVVVSFHSLEDRIVKNFF-------KENSEKPVARSKYAKDDMAIDPDKWL 273
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
KI+T + + PS +E LN R RSAKLR + I
Sbjct: 274 ---------KIITNKALAPSDKEVGLNIRARSAKLRAAKAI 305
>gi|385677347|ref|ZP_10051275.1| 16S rRNA m(4)C1402 methyltranserfase [Amycolatopsis sp. ATCC 39116]
Length = 319
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 127/345 (36%), Positives = 173/345 (50%), Gaps = 39/345 (11%)
Query: 113 QSSHIPVMLGEVLDVFSSSRT--ITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSA 170
+++H+PVM G VL++F+ + VD T G GHS A++ A P+LKL IG+D DP A
Sbjct: 4 EAAHVPVMTGRVLELFAPALEGRPAVVVDATTGLGGHSEALLTAFPQLKL-IGLDRDPHA 62
Query: 171 LAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG---VDAILMDLGM 227
L ++ A L F + +V + + + R G VD ++ DLG+
Sbjct: 63 LERSGARLAK--------------FGDRVELVHAVYDTLPDVLARLGLSRVDGVMFDLGV 108
Query: 228 SSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLL 287
SSMQ+++ ERGF+ D PLDMRMDP A D+LN++ E+ R+LREYGEE +
Sbjct: 109 SSMQLDSEERGFAYARDAPLDMRMDPTTGQTAADVLNTYEPGELVRILREYGEERFAQRI 168
Query: 288 QNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLE 347
IV R R + LV L+ P RR G A R FQALRI VN EL+ L
Sbjct: 169 VKAIVAERARQPFDRSERLVRLLYDAVPAA-SRRTGG-HPAKRTFQALRIEVNGELEVLR 226
Query: 348 SSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNIN 407
++ A LA GR+ V S+HSLEDRIVKQ F + G EL
Sbjct: 227 RAIPAALSALAVDGRIVVESYHSLEDRIVKQAFAELAKSR--TPPGLPVELPG------- 277
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
G K++T+ S EE N R S +LRV ++I
Sbjct: 278 --------HGPELKLITRGAEKASEEEIEQNPRAASVRLRVAERI 314
>gi|328955350|ref|YP_004372683.1| S-adenosyl-methyltransferase MraW [Coriobacterium glomerans PW2]
gi|328455674|gb|AEB06868.1| S-adenosyl-methyltransferase MraW [Coriobacterium glomerans PW2]
Length = 321
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 134/342 (39%), Positives = 182/342 (53%), Gaps = 31/342 (9%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAH-PELKLHIGVDVDPSAL 171
+ H PVM+ EVL+ + + VDCTLG AGH+ + R PE +L IG+D D AL
Sbjct: 9 EYQHEPVMVAEVLEALRPEES-SVIVDCTLGGAGHAVRLAREMGPEGQL-IGIDQDDMAL 66
Query: 172 AKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQ 231
A A L+ + G AH +K NFR + +L + GVD L DLG+SS Q
Sbjct: 67 NSAAARLDREVPGVAHRLMK-----GNFRDLDELLCAAEV----PGVDGFLFDLGVSSPQ 117
Query: 232 VNNPERGFSVLGDGPLDMRMDPQAS-LKAEDILNSWPDAEVGRVLREYGEESNWHLLQNK 290
++ P RGFS D PLDMRMDPQ+ A D++N + +AE+ R+L +GEE + +
Sbjct: 118 LDIPNRGFSYHEDAPLDMRMDPQSGGPSAADVVNGYSEAELIRILHAFGEERFAGAIARE 177
Query: 291 IVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSL 350
IV+ R + +T ELV++I++ P RRQG A R FQA+RI VN EL L L
Sbjct: 178 IVRRRKTKPISTTTELVEVIKAAIPAA-ARRQGP-HPARRSFQAIRIEVNHELDALLIGL 235
Query: 351 HACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETW 410
A L P GR+ VIS+HSLEDRIVK+ F S D +
Sbjct: 236 QAALRWLNPAGRICVISYHSLEDRIVKRLFQS-----------ASRGCTCPPDIPVCVCG 284
Query: 411 IRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
I+ K++TK+P+ + EE N R RSAK+RV K+
Sbjct: 285 NVPIL-----KVITKKPLVATTEEVERNPRSRSAKIRVAMKL 321
>gi|160895291|ref|ZP_02076062.1| hypothetical protein CLOL250_02850 [Clostridium sp. L2-50]
gi|156862984|gb|EDO56415.1| S-adenosyl-methyltransferase MraW [Clostridium sp. L2-50]
Length = 314
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/336 (36%), Positives = 182/336 (54%), Gaps = 30/336 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E ++ + + ++D TLG AGHS I + IG+D D A+A A+
Sbjct: 5 HTSVLLDETIENLNI-KPNGVYMDGTLGGAGHSREIAKRLGSDGHLIGIDQDGEAIATAK 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L A + N+++ KS+L ++ NI S VD IL+DLG+SS Q++N
Sbjct: 64 ERL-------AEYGDRITVVRDNYQNFKSILDEL--NI--SQVDGILLDLGVSSYQLDNA 112
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
+RGF+ D PLDMRMD + + A+DI+N + + E+ +L+EYGEE + IV+ R
Sbjct: 113 DRGFTYRVDAPLDMRMDDRQTKTAKDIVNGYTEQELFHILKEYGEERFAKSIAYHIVKYR 172
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +T EL D+I+ P QG + + FQA+RI +N EL+ L +S+ D
Sbjct: 173 ENKEIETTEELNDIIRGSIPAKVRNAQGH--PSKQTFQAIRIELNHELEVLTNSIDGMID 230
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
CL PGGRL +I+FHSLEDRIVK F + E I N +
Sbjct: 231 CLKPGGRLCIITFHSLEDRIVKNAF-------------RKNENPCICPPNF---PVCTCG 274
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ GK++T++PI P+ EE +N R +SAKLRV +K
Sbjct: 275 RKSKGKVITRKPILPTEEEMEINSRSKSAKLRVFEK 310
>gi|451979759|ref|ZP_21928171.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Nitrospina gracilis 3/211]
gi|451763038|emb|CCQ89370.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Nitrospina gracilis 3/211]
Length = 312
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 132/346 (38%), Positives = 181/346 (52%), Gaps = 49/346 (14%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H PV+L EVL + + VD TLG GH+ A++ A P L++ +G+D D AL +AR
Sbjct: 5 HTPVLLEEVLH-YIEPKNKRLIVDGTLGDGGHTQAMLDAGPTLRV-LGIDRDTEALERAR 62
Query: 176 AHLNS------LLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSS 229
L + L+HG +F +KS+L + +E +D IL+D G+SS
Sbjct: 63 QRLATYKERVILVHG-------------SFSEVKSILARQNER----AMDGILLDFGVSS 105
Query: 230 MQVNNPERGFSVLGDGPLDMRMD-PQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQ 288
Q++ ERGFS DGPLDMRMD Q A D+L + D E+ ++ R+YGEE L
Sbjct: 106 RQLDVAERGFSFRFDGPLDMRMDRSQEGPTAADLLETLSDFELEQIFRKYGEEKRPRQLV 165
Query: 289 NKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLES 348
I +A+ G H +L Q ++ + R+ I AT+ FQALRIAVN EL ++
Sbjct: 166 RLIRKAQ---GSHPIKTTFELSQILSSAAKPSRKPRIHPATKAFQALRIAVNRELDHIQK 222
Query: 349 SLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE 408
+L DCLAPGGR+ VISFHSLEDRIVK F R +A+G I
Sbjct: 223 ALEDAIDCLAPGGRMVVISFHSLEDRIVKDFF-------RTEAKG-----------CICP 264
Query: 409 TWIRQIIQGWNG--KILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ G K+LT+R + PS E N R SAKLR ++I
Sbjct: 265 PKAPVCVCGRKSRLKVLTRRVVKPSTLEVERNPRASSAKLRAAERI 310
>gi|51473750|ref|YP_067507.1| S-adenosyl-methyltransferase MraW [Rickettsia typhi str.
Wilmington]
gi|383752525|ref|YP_005427625.1| 16S rRNA m(4)C1402 methyltransferase [Rickettsia typhi str. TH1527]
gi|383843360|ref|YP_005423863.1| 16S rRNA m(4)C1402 methyltransferase [Rickettsia typhi str.
B9991CWPP]
gi|116241372|sp|Q68WG7.1|RSMH_RICTY RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|51460062|gb|AAU04025.1| S-adenosyl-methyltransferase MraW [Rickettsia typhi str.
Wilmington]
gi|380759168|gb|AFE54403.1| 16S rRNA m(4)C1402 methyltransferase [Rickettsia typhi str. TH1527]
gi|380760007|gb|AFE55241.1| 16S rRNA m(4)C1402 methyltransferase [Rickettsia typhi str.
B9991CWPP]
Length = 306
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/340 (36%), Positives = 190/340 (55%), Gaps = 42/340 (12%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRA-HPELKLHIGVDVDPSALAKA 174
HIPVML EVL+V + + S++DCT GA G+S+AI+++ + + +D DP + +
Sbjct: 5 HIPVMLSEVLEVLAP-KGYESYLDCTFGAGGYSNAILKSCYCSV---TSLDCDPHVIERV 60
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+G+ +KT+ FA +F +K + D I+MDLG+SSMQ++
Sbjct: 61 EQIKQD--YGERFSFIKTN-FADSFGKLK-----------QQKFDGIVMDLGVSSMQLDI 106
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
RGFS L DGPLDMRM Q AE+ +N+ + E+ V+ +YG ES + I++
Sbjct: 107 AGRGFSFLYDGPLDMRMSAQG-FSAEEFVNTADEEEISDVIYKYGNESLSRRIAKNIIKY 165
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + ST +L ++++ G R+G I +AT+ FQA+RI +N+EL LE L
Sbjct: 166 RKIARIDSTRKLAEIVRYSI----GFRKGKIDSATKTFQAIRIYINNELGELERFLANVK 221
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDD-NINET-WIR 412
+ L GRL V+SFHSLEDRIVK F +E++ + +D+ I++ W+
Sbjct: 222 NILKKNGRLVVVSFHSLEDRIVKNFF-------KENSAKPVARSKYAKDEIKIDQNKWL- 273
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+I+T + +TPS++E RLN R RSAKLR +KI
Sbjct: 274 --------EIITHKVLTPSSQEIRLNVRARSAKLRAAKKI 305
>gi|392968628|ref|ZP_10334044.1| S-adenosyl-methyltransferase MraW [Fibrisoma limi BUZ 3]
gi|387842990|emb|CCH56098.1| S-adenosyl-methyltransferase MraW [Fibrisoma limi BUZ 3]
Length = 301
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 134/338 (39%), Positives = 180/338 (53%), Gaps = 42/338 (12%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H PV+L E +D + T +VD T G GHS I+R E +L D D A A A+
Sbjct: 5 HQPVLLHECIDGLALQPGGT-YVDVTFGGGGHSREILRRLEEGRL-FAFDQDADAKANAQ 62
Query: 176 AHLNSLLHGQAHPHLKTHTF-AKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
A + L TF A NFR++K L + G+D IL DLG+SS Q++
Sbjct: 63 ALNDQRL-----------TFIASNFRNLKRYLRLYKAD----GIDGILADLGISSHQIDT 107
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
PERGFS D LDMRM+ QA A +++N +P+AE+ R+L YGE +N + IV A
Sbjct: 108 PERGFSTRFDADLDMRMNQQAERTAREVVNDYPEAELHRILGMYGEITNARTAASAIVSA 167
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R +++ EL +Q P RG+ + +VFQALRI VNDELK LE L
Sbjct: 168 RSNRTINTVNELKTALQRYAP--RGKENKYF---AQVFQALRIEVNDELKALEEFLEQVP 222
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
D L PGGRL V+S+HSLEDR+VK F+ N+ +G+ E +D NE Q
Sbjct: 223 DVLKPGGRLVVLSYHSLEDRLVK-NFI-----NKGKFQGDVE-----KDLFGNEIKPLQS 271
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ T++PI S +E N R RSAKLR+ +KI
Sbjct: 272 V--------TRKPIEASPDEISRNPRARSAKLRIAEKI 301
>gi|420187615|ref|ZP_14693635.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIHLM039]
gi|394256057|gb|EJE00993.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIHLM039]
Length = 311
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 121/335 (36%), Positives = 179/335 (53%), Gaps = 30/335 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ VML E +D + + + +VDCTLG AGH+ ++ + I +D D +A+ A+
Sbjct: 4 HVSVMLNETID-YLNIKEDGVYVDCTLGGAGHALYLLNQLNDKGRLIAIDQDLTAIENAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L LH H NFR + ++L +++ VD I DLG+SS Q++ P
Sbjct: 63 EVLKEHLHKVTFVH-------NNFRELTNILNELE----IEKVDGIYYDLGVSSPQLDVP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D LDMRMD SL A +++N W + R+ YGEE + +I R
Sbjct: 112 ERGFSYHNDAKLDMRMDQTQSLSAYEVVNQWSYEALVRIFFRYGEEKFSKQIARRIEAHR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +T ELVD+I+ P + RR+G A RVFQA+RIAVNDEL E S+ +
Sbjct: 172 EQQSIETTLELVDVIKEGIPA-KARRKGG-HPAKRVFQAIRIAVNDELSAFEDSVEQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
C+ GGR+ VI+FHSLEDR+ KQ F ++ E + R + I E + ++
Sbjct: 230 CVKVGGRISVITFHSLEDRLCKQIF--------QEFEKGPDVPRGL--PVIPEAYTPKL- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
K + ++PIT + ++ N R RSAKLRV +
Sbjct: 279 -----KRVNRKPITATDDDLNENNRARSAKLRVAE 308
>gi|420210939|ref|ZP_14716328.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIHLM001]
gi|394282876|gb|EJE27058.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIHLM001]
Length = 311
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 121/335 (36%), Positives = 178/335 (53%), Gaps = 30/335 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ VML E +D + + +VDCTLG AGH+ ++ + I +D D +A+ A+
Sbjct: 4 HVSVMLNETIDYLNIKKD-GVYVDCTLGGAGHALYLLNQLNDKGRLIAIDQDLTAIENAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L LH H NFR + ++L +++ VD I DLG+SS Q++ P
Sbjct: 63 EVLKEHLHKVTFVH-------NNFRELTNILNELE----IEKVDGIYYDLGVSSPQLDVP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D LDMRMD SL A +++N W + R+ YGEE + +I R
Sbjct: 112 ERGFSYHNDAKLDMRMDQTQSLSAYEVVNQWSYEALVRIFFRYGEEKFSKQIARRIEAHR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +T ELVD+I+ P + RR+G A RVFQA+RIAVNDEL E S+ +
Sbjct: 172 EQQPIETTLELVDVIKEGIPA-KARRKGG-HPAKRVFQAIRIAVNDELSAFEDSVEQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
C+ GGR+ VI+FHSLEDR+ KQ F ++ E + R + I E + ++
Sbjct: 230 CVKVGGRISVITFHSLEDRLCKQIF--------QEFEKGPDVPRGL--PVIPEAYTPKL- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
K + ++PIT + ++ N R RSAKLRV +
Sbjct: 279 -----KRVNRKPITATDDDLNENNRARSAKLRVAE 308
>gi|148269200|ref|YP_001243660.1| S-adenosyl-methyltransferase MraW [Thermotoga petrophila RKU-1]
gi|281411498|ref|YP_003345577.1| S-adenosyl-methyltransferase MraW [Thermotoga naphthophila RKU-10]
gi|262825857|sp|A5IIR1.1|RSMH_THEP1 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|147734744|gb|ABQ46084.1| S-adenosyl-methyltransferase MraW [Thermotoga petrophila RKU-1]
gi|281372601|gb|ADA66163.1| S-adenosyl-methyltransferase MraW [Thermotoga naphthophila RKU-10]
Length = 299
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 178/345 (51%), Gaps = 52/345 (15%)
Query: 109 IQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDP 168
+++ HIPVM+ EV++ F +DCT+G GHS AI+ P ++ IG+DVD
Sbjct: 1 MRKYSQRHIPVMVREVIE-FLKPEDEKIILDCTVGEGGHSKAILEHCPGCRI-IGIDVDS 58
Query: 169 SALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMS 228
L A L + F ++R +L + VD ILMDLG+S
Sbjct: 59 EVLRIAEEKLKEFSD-------RASLFKISYREADFLLKTLGV----EKVDGILMDLGVS 107
Query: 229 SMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNW-HLL 287
+ Q+ RGF+ + PLDMRMD ++ + A+ +LN P+ E+ R++ EYGEE + +
Sbjct: 108 TYQLKGENRGFTFEREEPLDMRMDLESEVTAQKVLNELPEEELARIIFEYGEEKKFARRI 167
Query: 288 QNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLE 347
KIV+ R L++T +LV ++ P RR+ AT+ FQA+RI VN EL+ L+
Sbjct: 168 ARKIVENR---PLNTTLDLVKAVREALPSYEIRRRKR-HFATKTFQAIRIYVNRELENLK 223
Query: 348 SSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNIN 407
L D L PGGR+ VISFHSLEDRIVK+TF N ++LR
Sbjct: 224 EFLRKAEDLLNPGGRIVVISFHSLEDRIVKETF------------RNSKKLR-------- 263
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
ILT++P+ PS EE R N R RS +LR ++I
Sbjct: 264 --------------ILTEKPVRPSEEEIRENPRARSGRLRAAERI 294
>gi|418411599|ref|ZP_12984866.1| ribosomal RNA small subunit methyltransferase H [Staphylococcus
epidermidis BVS058A4]
gi|410892325|gb|EKS40119.1| ribosomal RNA small subunit methyltransferase H [Staphylococcus
epidermidis BVS058A4]
Length = 311
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 121/335 (36%), Positives = 179/335 (53%), Gaps = 30/335 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ VML E +D + + + +VDCTLG AGH+ ++ + I +D D +A+ A+
Sbjct: 4 HVSVMLNETID-YLNIKEDGVYVDCTLGGAGHALYLLNQLNDKGRLIAIDQDLTAIENAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L LH H NFR + ++L +++ VD I DLG+SS Q++ P
Sbjct: 63 EVLKEHLHKVTFVH-------NNFRELTNILNELE----TEKVDGIYYDLGVSSPQLDVP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D LDMRMD SL A +++N W + R+ YGEE + +I R
Sbjct: 112 ERGFSYHNDAKLDMRMDQTQSLSAYEVVNQWSYEALVRIFFRYGEEKFSKQIARRIEAHR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +T ELVD+I+ P + RR+G A RVFQA+RIAVNDEL E S+ +
Sbjct: 172 EQRPIETTLELVDVIKEGIPA-KARRKGG-HPAKRVFQAIRIAVNDELSAFEDSVEQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
C+ GGR+ VI+FHSLEDR+ KQ F ++ E + R + I E + ++
Sbjct: 230 CVKVGGRISVITFHSLEDRLCKQIF--------QEFEKGPDVPRGL--PVIPEAYTPKL- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
K + ++PIT + ++ N R RSAKLRV +
Sbjct: 279 -----KRVNRKPITATDDDLNENNRARSAKLRVAE 308
>gi|325288822|ref|YP_004265003.1| ribosomal RNA small subunit methyltransferase H [Syntrophobotulus
glycolicus DSM 8271]
gi|324964223|gb|ADY55002.1| Ribosomal RNA small subunit methyltransferase H [Syntrophobotulus
glycolicus DSM 8271]
Length = 310
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 125/348 (35%), Positives = 172/348 (49%), Gaps = 53/348 (15%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + + ++VDCT G GHS ++ + I D D A AR
Sbjct: 5 HTSVLLKETVDSVLT-KADGTYVDCTFGGGGHSRLLLEKLSDQAKLIAFDQDEKAYLNAR 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
+ F +NF H+++ L E +L V I+ DLG+SS Q++
Sbjct: 64 CRFAG--------DKRVIFFRRNFVHMENTLDT--EGLL--PVTGIMFDLGVSSPQLDEA 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD A A +++N W +AE+ R++R YGEE + IV+AR
Sbjct: 112 ERGFSYRHDAPLDMRMDRSAEFSAAELVNGWDEAELTRIIRAYGEEKWASRISKFIVEAR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +TG LV++I++ P G R+ A R FQALRIAVN EL L +L
Sbjct: 172 KEQEIKTTGRLVEIIKAAVPA--GARKEGPHPAKRTFQALRIAVNRELDVLAEALDQALR 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
CL GGRL VI+FHSLEDR VK+ L W+ +
Sbjct: 230 CLDSGGRLAVITFHSLEDRTVKEKILE---------------------------WLGRCT 262
Query: 416 --QGW---------NGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
QG+ K +T++P+ PS EE N R RSAKLRV++KI
Sbjct: 263 CPQGFPVCTCGARAQVKQITRKPVIPSNEEIENNPRSRSAKLRVVEKI 310
>gi|342732571|ref|YP_004771410.1| S-adenosyl-methyltransferase [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|417964870|ref|ZP_12606518.1| Ribosomal RNA small subunit methyltransferase H [Candidatus
Arthromitus sp. SFB-4]
gi|417969091|ref|ZP_12610053.1| Ribosomal RNA small subunit methyltransferase H [Candidatus
Arthromitus sp. SFB-co]
gi|418016023|ref|ZP_12655588.1| S-adenosyl-methyltransferase [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|418372827|ref|ZP_12964919.1| Ribosomal RNA small subunit methyltransferase H [Candidatus
Arthromitus sp. SFB-mouse-SU]
gi|342330026|dbj|BAK56668.1| S-adenosyl-methyltransferase [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|345506358|gb|EGX28652.1| S-adenosyl-methyltransferase [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|380338460|gb|EIA27347.1| Ribosomal RNA small subunit methyltransferase H [Candidatus
Arthromitus sp. SFB-co]
gi|380339728|gb|EIA28418.1| Ribosomal RNA small subunit methyltransferase H [Candidatus
Arthromitus sp. SFB-4]
gi|380342496|gb|EIA30941.1| Ribosomal RNA small subunit methyltransferase H [Candidatus
Arthromitus sp. SFB-mouse-SU]
Length = 312
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/341 (36%), Positives = 178/341 (52%), Gaps = 33/341 (9%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
Q +H VML E +D + + +VDCTLG GHSS I+ IG+D D A+
Sbjct: 2 QFNHFSVMLDESIDSLNIKQE-GIYVDCTLGGGGHSSKILDGLNNTGRLIGIDQDQYAID 60
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQ 231
R Q +F + NF++I +L I VD ILMDLG+SS Q
Sbjct: 61 YCR---------QKFSGYDNISFVQDNFKNIDLILKMIG----IEKVDGILMDLGVSSYQ 107
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ +RGFS + +G LDMRMD S A DI+N + + ++ + + YGEE + NKI
Sbjct: 108 IDTDDRGFSYIRNGKLDMRMDTSQSFSAYDIINGYDEEKLSYIFKVYGEEKYHRRIANKI 167
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
V++R + +T +LV LI V P +++G + + +VFQALRI VN EL+ LE ++
Sbjct: 168 VESRKLNKISTTHDLVKLIDEVIPKFEIKKRGHL--SKKVFQALRIEVNGELEILEKAII 225
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
+ L GGR+ +I+FHSLEDRIVK TF + E +D +
Sbjct: 226 DAINHLNVGGRISIITFHSLEDRIVKNTFNYL-----------ATECVCPKDFPVCRCEK 274
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++ I I+ K+P+ PS E N R SAKLRV +K+
Sbjct: 275 KKEIS-----IINKKPVLPSGTELSKNSRSASAKLRVAEKL 310
>gi|71894357|ref|YP_278465.1| S-adenosyl-methyltransferase MraW [Mycoplasma synoviae 53]
gi|88909204|sp|Q4A667.1|RSMH_MYCS5 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|71851145|gb|AAZ43754.1| S-adenosyl-methyltransferase [Mycoplasma synoviae 53]
Length = 301
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 128/346 (36%), Positives = 179/346 (51%), Gaps = 54/346 (15%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
+++HIPV+L EVLD + ++D TLG GHS I++ P+ KL I D D A+
Sbjct: 2 KNNHIPVLLNEVLDNLALKEN-GIYIDLTLGMGGHSKEILKRIPKGKL-IAFDKDDFAIK 59
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG---VDAILMDLGMSS 229
A L+ + A NF IKS E + G VD IL DLG+SS
Sbjct: 60 NASKTLSEV--------------ANNFEIIKSDFKDFKEELSNLGIYKVDGILADLGISS 105
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
Q++N ERGFS L + LDMRMD L A D++N +P ++ +L+ YGE N+ + +
Sbjct: 106 PQIDNAERGFSYLKNSALDMRMDQSQKLSAYDVVNLYPVEKLEYILKTYGEVKNYKYIAS 165
Query: 290 KIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKT---ATRVFQALRIAVNDELKTL 346
KI++AR +++T EL +LI+SVTP Q +K A VFQA+RI VN+EL ++
Sbjct: 166 KIIEAR---PINTTLELANLIKSVTP------QKLLKLKNPAKNVFQAIRIEVNNELDSI 216
Query: 347 ESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNI 406
L + D L L +ISFHSLED+IVK F +E + I++D
Sbjct: 217 HQMLSSVEDLLKVNASLLIISFHSLEDKIVKNYF-------QELTKPKLPSKMPIQED-- 267
Query: 407 NETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
K R I PS +E LN R +SAKLR++ KI
Sbjct: 268 --------------KFFATRRIYPSKQELNLNSRSKSAKLRILTKI 299
>gi|291229752|ref|XP_002734836.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 377
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 131/357 (36%), Positives = 188/357 (52%), Gaps = 35/357 (9%)
Query: 109 IQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDP 168
+ + HIPVML +VLD FS + ++D T GA GHSS I++ + ++ +D DP
Sbjct: 42 VHSNEQLHIPVMLDDVLDFFSPEKN-QVYIDMTFGAGGHSSEILKCAENITMY-ALDRDP 99
Query: 169 SALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMS 228
AL A+ S LHG + F I +L Q D + + VD +L+D G S
Sbjct: 100 LALDIAKQL--SGLHGN-----RIIPLEGKFSEITRLLDQHDVGL--NSVDGVLLDAGCS 150
Query: 229 SMQVNNPERGFSVLGDGPLDMRMDPQASLK---AEDILNSWPDAEVGRVLREYGEESNWH 285
SMQ++ ERGFS+ DGPLDMRMD K A D++N+ +A++ +++R YGEE +
Sbjct: 151 SMQMDTAERGFSISKDGPLDMRMDSDRDPKQPTAADVVNALSEADLAKIIRTYGEEKHAR 210
Query: 286 LLQNKIVQARLR-GGLHSTGELVDLIQSVTPGMRGRRQG-----WIKTATRVFQALRIAV 339
+ IV+ R + +T E ++ ++Q + TAT+ FQALRI V
Sbjct: 211 KIARSIVEYRTTWQPITTTKEFAYVVSCAFSHREAKKQKDKLRRPVHTATKTFQALRIFV 270
Query: 340 NDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELR 399
N+EL L L L PGG+L VI+FHSLEDRIVK+ FL ID++ + + E++R
Sbjct: 271 NNELNELVMGLEQVEKILKPGGKLAVITFHSLEDRIVKR-FLRGIDYSEKYSMSIGEKMR 329
Query: 400 NIR----DDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
R DDN + W K + K+ + P E+ N R RSAKLR KI
Sbjct: 330 ENRTRDGDDNRPQRW----------KEINKKVLEPLEEDIIDNPRARSAKLRTAVKI 376
>gi|224476281|ref|YP_002633887.1| S-adenosyl-methyltransferase MraW [Staphylococcus carnosus subsp.
carnosus TM300]
gi|262826678|sp|B9DPQ9.1|RSMH_STACT RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|222420888|emb|CAL27702.1| putative MraW methylase family S-adenosyl-methyltransferase
[Staphylococcus carnosus subsp. carnosus TM300]
Length = 311
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 126/336 (37%), Positives = 178/336 (52%), Gaps = 32/336 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ VML E +D + + +VDCTLG AGH+ ++ E I +D D +A+ A+
Sbjct: 4 HVSVMLRETIDELNVKKD-GVYVDCTLGGAGHALYLLNQLDENGHLIAIDQDLTAIENAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFA-KNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L HL TF NFR I +L +D + VD I DLG+SS Q++
Sbjct: 63 EVLKD--------HLDQVTFVHSNFRQINQILDDLDID----KVDGIYYDLGVSSPQLDV 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
PERGFS D LDMRMD L A +++N WP ++ R+ YGEE + +I +
Sbjct: 111 PERGFSYHQDARLDMRMDQTQELSAYEVVNEWPYEDLVRIFYRYGEEKFSKQIARRIEKT 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +T +LVD+I+ P + RR+G A RVFQA+RIAVNDELK E SL
Sbjct: 171 RENEPIETTLQLVDVIKEGIPA-KARRKGG-HPAKRVFQAIRIAVNDELKAFEDSLEQAI 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
+ + GR+ VI+FHSLEDR+ KQ F ++ E E R + I E + ++
Sbjct: 229 ERVKVHGRISVITFHSLEDRLCKQIF--------QEYEKGPEVPRGL--PIIPEEYTPKL 278
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
K + ++PI+ S E+ N R RSAKLRV +
Sbjct: 279 ------KRVNRKPISASEEDLAENNRARSAKLRVAE 308
>gi|383481756|ref|YP_005390671.1| 16S rRNA m(4)C1402 methyltransferase [Rickettsia rhipicephali str.
3-7-female6-CWPP]
gi|378934095|gb|AFC72598.1| 16S rRNA m(4)C1402 methyltransferase [Rickettsia rhipicephali str.
3-7-female6-CWPP]
Length = 307
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 126/341 (36%), Positives = 188/341 (55%), Gaps = 42/341 (12%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHI-GVDVDPSALAK 173
SH+PVML E+L+ S + S++DCT GA G+S AI+ + ++ +D DP+ + +
Sbjct: 4 SHVPVMLNEMLEALSP-KDGESYLDCTFGAGGYSKAILES---CNCYVTALDRDPNVIKR 59
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
A + +G+ ++T+ FA +F +K D I++DLG+SSMQ++
Sbjct: 60 AEEIQQN--YGERFDFVETN-FADSFAKLKE-----------KKFDGIVLDLGVSSMQLD 105
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
+RGFS L DGPLDMRM Q L AE+ +N+ + E+ V+ +YG+ES + +IV+
Sbjct: 106 IADRGFSFLHDGPLDMRMSGQG-LSAEEFVNTAEEKELADVIYKYGDESFSRRIAKRIVE 164
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
R + STG+L +++S G R+G I AT+ FQA+RI VNDEL LE L
Sbjct: 165 YRKTARIDSTGKLAKIVRSSI----GFRKGKIDPATKTFQAIRIYVNDELGELEQFLVNV 220
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE--TWI 411
+ L GRL V+SFHSLEDRIVK F +E++E + +DD + W+
Sbjct: 221 KNILKKDGRLVVVSFHSLEDRIVKNFF-------KENSEKPVVRSKYAKDDMTIDPNKWL 273
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
KI+T + + S +E LN R RSAKLR + I
Sbjct: 274 ---------KIITNKALASSDKEVGLNIRARSAKLRAAKAI 305
>gi|170287862|ref|YP_001738100.1| S-adenosyl-methyltransferase MraW [Thermotoga sp. RQ2]
gi|262825881|sp|B1LCF9.1|RSMH_THESQ RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|170175365|gb|ACB08417.1| S-adenosyl-methyltransferase MraW [Thermotoga sp. RQ2]
Length = 299
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 178/345 (51%), Gaps = 52/345 (15%)
Query: 109 IQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDP 168
+++ HIPVM+ EV++ F +DCT+G GHS AI+ P ++ IG+DVD
Sbjct: 1 MRKYSQRHIPVMVREVIE-FLKPEDEKIILDCTVGEGGHSRAILEHCPGCRI-IGIDVDS 58
Query: 169 SALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMS 228
L A L + F ++R +L + VD ILMDLG+S
Sbjct: 59 EVLRIAEEKLKEFSD-------RASLFKISYREADFLLKTLGV----EKVDGILMDLGVS 107
Query: 229 SMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNW-HLL 287
+ Q+ RGF+ + PLDMRMD ++ + A+ +LN P+ E+ R++ EYGEE + +
Sbjct: 108 TYQLKGENRGFTFEREEPLDMRMDLESEVTAQKVLNELPEEELARIIFEYGEEKKFARRI 167
Query: 288 QNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLE 347
KIV+ R L++T +LV ++ P RR+ AT+ FQA+RI VN EL+ L+
Sbjct: 168 ARKIVENR---PLNTTLDLVKAVREALPSYEIRRRKR-HFATKTFQAIRIYVNRELENLK 223
Query: 348 SSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNIN 407
L D L PGGR+ VISFHSLEDRIVK+TF N ++LR
Sbjct: 224 EFLRKAEDLLNPGGRIVVISFHSLEDRIVKETF------------RNSKKLR-------- 263
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
ILT++P+ PS EE R N R RS +LR ++I
Sbjct: 264 --------------ILTEKPVRPSEEEIRENPRARSGRLRAAERI 294
>gi|402311814|ref|ZP_10830745.1| S-adenosyl-methyltransferase MraW [Lachnospiraceae bacterium ICM7]
gi|400370961|gb|EJP23940.1| S-adenosyl-methyltransferase MraW [Lachnospiraceae bacterium ICM7]
Length = 315
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 123/339 (36%), Positives = 183/339 (53%), Gaps = 35/339 (10%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
+H V+L EV++ + + +VD TLG GH+ +++ KL IG+D D A+ A
Sbjct: 8 NHKSVLLNEVIESLNI-KADGYYVDGTLGGGGHALEVVKRLESGKL-IGIDRDSDAIKAA 65
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
LN ++ N+ +I+++L + ENI VD I +DLG+SS Q++
Sbjct: 66 TQRLNDYINN-------VIIIRDNYVNIENILKR--ENI--GKVDGIYIDLGVSSYQLDT 114
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGF+ D PLDMRMD + LKA DI+N + ++E+ ++R+YGE+ + IV+
Sbjct: 115 AERGFTYRFDAPLDMRMDDRNELKASDIVNDYSESELFHIIRDYGEDRFAKNIAKHIVEY 174
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + + +T ELVD+I++ P M+ + G A R FQA+RI +N EL+ L SL
Sbjct: 175 RNKKRIETTFELVDIIKASIP-MKIQVTGG-HPAKRTFQAIRIELNKELEVLTDSLDVMI 232
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
D L PGGRL VI+FHSLEDRIVKQ F + +
Sbjct: 233 DLLKPGGRLSVITFHSLEDRIVKQAF------------------KKAESPCVCPKKFPVC 274
Query: 415 IQG--WNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ G G+++T++ I PS EE N R +SAKLRV +K
Sbjct: 275 VCGNKSKGRVITRKAILPSEEELEENSRSKSAKLRVFEK 313
>gi|416998912|ref|ZP_11939581.1| S-adenosyl-methyltransferase MraW [Veillonella parvula
ACS-068-V-Sch12]
gi|333977065|gb|EGL77924.1| S-adenosyl-methyltransferase MraW [Veillonella parvula
ACS-068-V-Sch12]
Length = 310
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 127/340 (37%), Positives = 176/340 (51%), Gaps = 35/340 (10%)
Query: 115 SHIPVMLGEVLD-VFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAK 173
+H V+L E +D V ++ + I +VDCTLG AGH+ A+ + IG+D D AL+
Sbjct: 4 NHTSVLLRETVDSVVTNPKGI--YVDCTLGGAGHAHAVGEMLDPEGMIIGLDQDEDALSV 61
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
AR L+ L + T NF ++K L +N VD + DLG+SS Q++
Sbjct: 62 ARQRLSDL-------KCQVLTIPTNFSNLKEAL----QNAGIYEVDGFIFDLGVSSYQLD 110
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
PERGFS + DGPLDMRMD A L AE+I+N + ++ +++R+YGEE + IV+
Sbjct: 111 TPERGFSYMNDGPLDMRMDKDAPLTAEEIVNEYDSEQLLQIIRDYGEERWAKRIVEFIVE 170
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +TGELV +I++ P RQ A R FQA+RI VN EL L S
Sbjct: 171 ARQEKRITTTGELVRIIKNAIPA--KARQDGPHPAKRTFQAIRIEVNRELAILHDSFVDA 228
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
L P G +GVI+FHSLEDRI KQTF + + I +
Sbjct: 229 VSMLKPKGMIGVITFHSLEDRITKQTF------------------KELSTACICPPQLPV 270
Query: 414 IIQGWNGKILTK-RPITPSAEEERLNCRCRSAKLRVIQKI 452
+ + K + I PS E +N R RSAKLRV K+
Sbjct: 271 CVCNHKAVVKAKNKAIEPSIGEIEVNPRARSAKLRVAVKL 310
>gi|168186149|ref|ZP_02620784.1| S-adenosyl-methyltransferase MraW [Clostridium botulinum C str.
Eklund]
gi|169295776|gb|EDS77909.1| S-adenosyl-methyltransferase MraW [Clostridium botulinum C str.
Eklund]
Length = 309
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/342 (35%), Positives = 188/342 (54%), Gaps = 40/342 (11%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
+H+PV+L E +D + + +VDCTLG AGHSS I++ + IG+D D +A+ A
Sbjct: 4 NHVPVLLEETIDSLNIKKD-GIYVDCTLGGAGHSSEILKKLSKKGRLIGIDQDINAIKAA 62
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+ L + H NF ++ +L +++ VD ILMDLG+SS Q++
Sbjct: 63 KNRLKGY-ENITYVH-------NNFYNLAGILDELN----VEKVDGILMDLGVSSYQLDT 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
PERGFS + D LDMRM+ ++ + A D++N + + ++ R+++ YGEE + IV+
Sbjct: 111 PERGFSYMNDAMLDMRMNTESGISAYDVVNGYSEDDLFRIIKNYGEERFARKIARAIVKE 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +T +LV +I++V P M+ ++ G A + FQA+RI VN EL+ L ++
Sbjct: 171 RNEKPIETTLQLVKIIRNVIP-MKFQQGGH--PAKKTFQAIRIEVNHELEILNKTVEDGV 227
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRN----IRDDNINETW 410
+ L GR+ VI+FHSLEDRI+K F +EL N ++ I
Sbjct: 228 NYLNKDGRISVITFHSLEDRIIKTKF---------------KELENPCTCPKEFPICVCG 272
Query: 411 IRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ I+ K++T++PI PS E N R RS+KLRV QKI
Sbjct: 273 KKPIV-----KVITRKPIEPSEVERENNSRSRSSKLRVAQKI 309
>gi|410455420|ref|ZP_11309300.1| 16S rRNA m(4)C1402 methyltransferase [Bacillus bataviensis LMG
21833]
gi|409929247|gb|EKN66332.1| 16S rRNA m(4)C1402 methyltransferase [Bacillus bataviensis LMG
21833]
Length = 310
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 131/338 (38%), Positives = 186/338 (55%), Gaps = 32/338 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAII-RAHPELKLHIGVDVDPSALAKA 174
H V+L E +D + + +VDCTLG AGHSS I+ R KL+ D D +A+A A
Sbjct: 4 HTTVLLKEAVDGLNI-KPDGIYVDCTLGGAGHSSLILSRLGAGGKLY-AFDQDETAIAHA 61
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+ L+ +G+ +K+ NF ++K L E++ VD +L DLG+SS Q++
Sbjct: 62 KEKLSE--YGERLVIIKS-----NFLYLKEEL----ESLGIDYVDGVLYDLGVSSPQLDT 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
PERGFS D PLDMRMD A + A D++N W ++ R+ YGEE + KI A
Sbjct: 111 PERGFSYHHDAPLDMRMDNDADVSAYDVINHWSYEDLVRIFFRYGEEKFSKQIARKIEAA 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +T ELV+LI+ P R+ G A R+FQA+RIAVNDEL E SL+
Sbjct: 171 REVKPIETTFELVELIKDGIPAPARRKGG--HPAKRIFQAVRIAVNDELAVFEKSLNQAI 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
D L P GR+ VI+FHSLEDRI K L + +G L I D+ + +
Sbjct: 229 DLLKPEGRISVITFHSLEDRICKAA-LKKASETPQLPKG----LPIIPDE------YKPV 277
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ K+++++PI P+ EE N R RSAKLR+ +K+
Sbjct: 278 L-----KLVSRKPILPTEEELEQNNRARSAKLRIAEKL 310
>gi|379019334|ref|YP_005295568.1| 16S rRNA m(4)C1402 methyltransferase [Rickettsia rickettsii str.
Hlp#2]
gi|376331914|gb|AFB29148.1| 16S rRNA m(4)C1402 methyltransferase [Rickettsia rickettsii str.
Hlp#2]
Length = 307
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 125/336 (37%), Positives = 187/336 (55%), Gaps = 42/336 (12%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHI-GVDVDPSALAK 173
SH+ VML E+L+ S + S++DCT GA G+S AI+ + ++ +D DP+ + +
Sbjct: 4 SHVSVMLNEMLEALSP-KAGESYLDCTFGAGGYSKAILES---CNCYVTALDRDPNVIKR 59
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
A + +G+ ++T+ FA +F +K D I++DLG+SSMQ++
Sbjct: 60 AEEIQQN--YGERFNFVETN-FADSFAKLKE-----------KKFDGIVLDLGVSSMQLD 105
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
+RGFS L DGPLDMRM Q L AE+ +N+ + E+ V+ +YG+ES + +IV+
Sbjct: 106 IADRGFSFLHDGPLDMRMSGQG-LSAEEFVNAAEEKELADVIYKYGDESFSRRIAKRIVE 164
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
R + STG+L ++++S G R+G I AT+ FQA+RI VNDEL LE L
Sbjct: 165 YRKTARIDSTGKLAEIVRSSI----GFRKGKIDPATKTFQAIRIYVNDELGELEQFLVNV 220
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE--TWI 411
+ L GRL V+SFHSLEDRIVK F +E++E + +DD + W+
Sbjct: 221 KNILKKDGRLVVVSFHSLEDRIVKNFF-------KENSEKPVVRSKYAKDDMTIDPNKWL 273
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLR 447
KI+T + + PS +E LN R RSAKLR
Sbjct: 274 ---------KIITNKALAPSDKEVGLNIRARSAKLR 300
>gi|366166624|ref|ZP_09466379.1| 16S rRNA m(4)C1402 methyltranserfase [Acetivibrio cellulolyticus
CD2]
Length = 313
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 183/339 (53%), Gaps = 34/339 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H PV+ E ++ + +VD TLG AGHSSAI + E + IG+D D AL ++
Sbjct: 5 HKPVLFEECIENLDI-KPDGVYVDGTLGGAGHSSAIYQKLGEKGMLIGLDQDGFALETSK 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L +G+ + FA NF +IKSV EN + + VD IL+DLG+SS Q++
Sbjct: 64 KRLEDQ-NGKG-----SLIFANTNFVNIKSVCF---ENKI-ACVDGILLDLGVSSHQLDE 113
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS D PLDMRMD + AE I+N + E+ +++RE+GEE+ + IVQ
Sbjct: 114 AERGFSYNKDAPLDMRMDRRQKFTAETIVNEYSKEEIKKIIREFGEENWASRIAEFIVQR 173
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +TGELV++I++ P RR+G A R FQALRIAVNDEL L ++
Sbjct: 174 RDEKRIETTGELVEIIKAAIPS-SARREGP-HPAKRTFQALRIAVNDELGILSKAIEEGV 231
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
+ L PGGR +I+FHSLEDRIVK F I + +
Sbjct: 232 NLLKPGGRFCIITFHSLEDRIVKNEFNKYI------------------NPCTCPSTFPVC 273
Query: 415 IQGWN--GKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ G + + ++PI PS +E N R RSAKLRV++K
Sbjct: 274 VCGKKKLAESVHRKPIVPSVKELEENPRARSAKLRVLEK 312
>gi|294101810|ref|YP_003553668.1| S-adenosyl-methyltransferase MraW [Aminobacterium colombiense DSM
12261]
gi|293616790|gb|ADE56944.1| S-adenosyl-methyltransferase MraW [Aminobacterium colombiense DSM
12261]
Length = 300
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 123/340 (36%), Positives = 178/340 (52%), Gaps = 49/340 (14%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HIPVML EV++ + + VD TLG G++ I+ P L +G+D D A++ A+
Sbjct: 4 HIPVMLKEVIESLKNVESPQMIVDATLGLGGYAEEILNVFPA-TLLVGIDRDEQAISLAQ 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L S + H + F I VL + EN + D I+ DLG+S++Q+++P
Sbjct: 63 KRLVSFAE-------RVHIYNSPFSAIAMVLSK--EN---AEPDGIVFDLGVSNLQLSSP 110
Query: 236 ERGFSVLGDGPLDMRMDP---QASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
ERGFS DGPLDMRM+ ++ A I+N++ + E+ + +YGEE + IV
Sbjct: 111 ERGFSFQNDGPLDMRMEGTSGESGYSAAQIVNTFSEKELADIFWKYGEERYSRRIATGIV 170
Query: 293 QARLRGG-LHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
+ R + G + T +LV+ I+S P R+ G A +VFQALRI VNDEL+ LE L
Sbjct: 171 RFREKNGPIQRTFQLVEAIRSSLPAPVQRKMGG-HPARKVFQALRIFVNDELQELEKGLQ 229
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
+ LAPGG + V+S+HSLEDRIVK ++ D D
Sbjct: 230 GALESLAPGGVIVVVSYHSLEDRIVK---YAMKDWKTSD--------------------- 265
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+G +LT+RP+ PS EE N + RSAKLR +K
Sbjct: 266 -------HGDLLTRRPLKPSEEEVEKNYKARSAKLRAFRK 298
>gi|158320404|ref|YP_001512911.1| S-adenosyl-methyltransferase MraW [Alkaliphilus oremlandii OhILAs]
gi|263446681|sp|A8MH28.1|RSMH_ALKOO RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|158140603|gb|ABW18915.1| S-adenosyl-methyltransferase MraW [Alkaliphilus oremlandii OhILAs]
Length = 311
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/339 (35%), Positives = 184/339 (54%), Gaps = 34/339 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E ++ + +VD TLG AGHSS I + + L IG+D D +A+ A
Sbjct: 5 HVSVLLEECIENLNIKEN-GIYVDGTLGGAGHSSEIAKRLSDKGLLIGIDQDENAIKAAG 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L + + NF +I ++L +N+ G+D IL+DLG+SS Q++
Sbjct: 64 EKLTPMKE-------RIKLVRDNFSNIDAIL----QNLEIDGIDGILLDLGVSSHQLDEA 112
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
+RGFS + D PLDMRMD + ++ A +++NS+ + ++ +++ YGEE + N IV R
Sbjct: 113 DRGFSYMHDAPLDMRMDTRQAVSAMEVVNSYTEKDLENIIKNYGEEKWAKRIANFIVDFR 172
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +T +LVD+I+ P +G R A R FQA+RI VN EL+ + ++
Sbjct: 173 KEEPITTTHQLVDVIKRAIP--KGARIDGPHPAKRTFQAIRIEVNGELEIINKTIDDAVR 230
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNI--NETWIRQ 413
L PGGR+ +I+FHSLEDRIVK F R++ + I E I +
Sbjct: 231 NLNPGGRICIITFHSLEDRIVKNAF------------------RDLSNPCICPPEFPICR 272
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ KI+T++PI P+ EE LN R RSAKLRV +KI
Sbjct: 273 CDRKPAVKIITRKPIVPTEEELELNPRARSAKLRVAEKI 311
>gi|217963812|ref|YP_002349490.1| S-adenosyl-methyltransferase MraW [Listeria monocytogenes HCC23]
gi|290892188|ref|ZP_06555184.1| S-adenosyl-methyltransferase MraW [Listeria monocytogenes FSL
J2-071]
gi|386008805|ref|YP_005927083.1| S-adenosyl-methyltransferase [Listeria monocytogenes L99]
gi|386027415|ref|YP_005948191.1| putative methylase family rpteins (SAM dependent
methyltransferases) [Listeria monocytogenes M7]
gi|404408477|ref|YP_006691192.1| S-adenosyl-methyltransferase [Listeria monocytogenes SLCC2376]
gi|263456353|sp|B8DH88.1|RSMH_LISMH RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|217333082|gb|ACK38876.1| S-adenosyl-methyltransferase MraW [Listeria monocytogenes HCC23]
gi|290558311|gb|EFD91829.1| S-adenosyl-methyltransferase MraW [Listeria monocytogenes FSL
J2-071]
gi|307571615|emb|CAR84794.1| S-adenosyl-methyltransferase [Listeria monocytogenes L99]
gi|336023996|gb|AEH93133.1| putative methylase family rpteins (SAM dependent
methyltransferases) [Listeria monocytogenes M7]
gi|404242626|emb|CBY64026.1| S-adenosyl-methyltransferase [Listeria monocytogenes SLCC2376]
Length = 312
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 130/340 (38%), Positives = 176/340 (51%), Gaps = 36/340 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D+ + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 4 HETVLLHETVDMLEV-KPDGIYVDATLGGAGHSEYLLNKLNEKGHLFAFDQDQTAIDNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L + TF K NFR +K L + I VD IL DLG+SS Q++
Sbjct: 63 IKLAD--------YSDKVTFIKANFRDMKEALNE--RGI--EAVDGILYDLGVSSPQLDE 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS D LDMRMD + L A+ ++N W ++ R+ +YGEE + +I +
Sbjct: 111 RERGFSYHQDAALDMRMDQEQELTAKTVVNEWSYQDLIRIFFQYGEEKFSKQIAREIERR 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +TGELVD+I++ P R+ G R FQA+RIAVNDEL +E SL
Sbjct: 171 REVKPIETTGELVDIIKTAIPAPARRKGGH--PGKRTFQAIRIAVNDELGAVEDSLEKAL 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNINETWIR 412
L PGGR+ VI+FHSLEDRI KQ F +E +G + L I D+
Sbjct: 229 TLLKPGGRISVITFHSLEDRITKQLF-------QEATKGPDLPPGLPVIPDE-------- 273
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ K+ T++PI PS EE N R RSAKLRVI+KI
Sbjct: 274 ---YKPDFKLATRKPIVPSEEELEQNNRARSAKLRVIEKI 310
>gi|453049698|gb|EME97274.1| 16S rRNA m(4)C1402 methyltransferase [Streptomyces mobaraensis NBRC
13819 = DSM 40847]
Length = 322
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/272 (39%), Positives = 154/272 (56%), Gaps = 22/272 (8%)
Query: 114 SSHIPVMLGEVLDVFSSSRTITS--FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
+ H+PVML LD+ + + T VDCTLGA GHS A++ PE +L + +D DP+AL
Sbjct: 5 ARHVPVMLQRCLDMLAPALTEPGAVVVDCTLGAGGHSEALLTTFPEARL-VALDRDPTAL 63
Query: 172 AKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG---VDAILMDLGMS 228
A L G+ + F + +++V ++ E + R G V +L DLG+S
Sbjct: 64 A---------LAGE-----RLAPFGERATLVRAVYHELPEVLERLGIPRVQGVLFDLGVS 109
Query: 229 SMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQ 288
SMQ++ +RGF+ D PLDMRMD + A ++LN++P E+ R+LR YGEE +
Sbjct: 110 SMQLDEADRGFAYAQDAPLDMRMDQTKGISAAEVLNTYPPGELVRILRAYGEEKQARRIV 169
Query: 289 NKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLES 348
+V+ R + + LV+LI+ P R G A R FQALRI VN EL ++E
Sbjct: 170 EAVVREREKEPFTRSARLVELIRDALPQAAKRTGG--NPAKRTFQALRIEVNGELASVER 227
Query: 349 SLHACFDCLAPGGRLGVISFHSLEDRIVKQTF 380
++ A LA GGR+ V+S+ SLEDRIVKQ F
Sbjct: 228 AIPAAVKALAVGGRIAVLSYQSLEDRIVKQVF 259
>gi|116873471|ref|YP_850252.1| S-adenosyl-methyltransferase MraW [Listeria welshimeri serovar 6b
str. SLCC5334]
gi|123461323|sp|A0AKE1.1|RSMH_LISW6 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|116742349|emb|CAK21473.1| S-adenosyl-methyltransferase [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 312
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 130/340 (38%), Positives = 176/340 (51%), Gaps = 36/340 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D+ + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 4 HETVLLHETVDMLEV-KPDGIYVDATLGGAGHSEYLLNKLNEQGHLFAFDQDQTAIDNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L + TF K NFR++K L + I VD IL DLG+SS Q++
Sbjct: 63 MKLAD--------YSDKVTFIKANFRYMKEALNE--RGI--EAVDGILYDLGVSSPQLDE 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS D LDMRMD + L A+ ++N W ++ R+ +YGEE + +I +
Sbjct: 111 RERGFSYHQDAALDMRMDQEQELTAKIVVNEWSYQDLIRIFFQYGEEKFSKQIAREIERR 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +TGELVD+I++ P R+ G R FQA+RIAVNDEL +E SL
Sbjct: 171 REVKPIETTGELVDIIKTAIPAPARRKGGH--PGKRTFQAIRIAVNDELGAVEDSLEKAL 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNINETWIR 412
L PGGR+ VI+FHSLEDRI K F +E +G E L I D+
Sbjct: 229 TLLKPGGRISVITFHSLEDRITKHLF-------QEATKGPELPPGLPVIPDE-------- 273
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ K+ T++PI PS EE N R RSAKLRVI+KI
Sbjct: 274 ---YKPDFKLATRKPIVPSEEELEQNNRARSAKLRVIEKI 310
>gi|27467772|ref|NP_764409.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis ATCC
12228]
gi|417646024|ref|ZP_12295909.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
VCU144]
gi|417656519|ref|ZP_12306202.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
VCU028]
gi|417910755|ref|ZP_12554471.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
VCU105]
gi|418603461|ref|ZP_13166846.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
VCU041]
gi|418606288|ref|ZP_13169576.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
VCU057]
gi|418609878|ref|ZP_13173012.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
VCU065]
gi|418616756|ref|ZP_13179680.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
VCU120]
gi|418622137|ref|ZP_13184893.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
VCU123]
gi|418624932|ref|ZP_13187592.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
VCU125]
gi|418629022|ref|ZP_13191538.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
VCU127]
gi|418664716|ref|ZP_13226182.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
VCU081]
gi|419768664|ref|ZP_14294780.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus IS-250]
gi|419772623|ref|ZP_14298654.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus IS-K]
gi|420163481|ref|ZP_14670228.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIHLM095]
gi|420167536|ref|ZP_14674188.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIHLM087]
gi|420169723|ref|ZP_14676301.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIHLM070]
gi|420172820|ref|ZP_14679318.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIHLM067]
gi|420182849|ref|ZP_14688982.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIHLM049]
gi|420185514|ref|ZP_14691606.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIHLM040]
gi|420194082|ref|ZP_14699911.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIHLM021]
gi|420197071|ref|ZP_14702795.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIHLM020]
gi|420202106|ref|ZP_14707701.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIHLM018]
gi|420209541|ref|ZP_14714978.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIHLM003]
gi|420214340|ref|ZP_14719619.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIH05005]
gi|420217182|ref|ZP_14722366.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIH05001]
gi|420219510|ref|ZP_14724526.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIH04008]
gi|420226970|ref|ZP_14731743.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIH05003]
gi|420231653|ref|ZP_14736298.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIH051668]
gi|30173015|sp|Q8CSX7.1|RSMH_STAES RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|27315316|gb|AAO04451.1|AE016746_241 conserved hypothetical protein [Staphylococcus epidermidis ATCC
12228]
gi|329730036|gb|EGG66427.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
VCU144]
gi|329736180|gb|EGG72452.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
VCU028]
gi|341654943|gb|EGS78679.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
VCU105]
gi|374406214|gb|EHQ77117.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
VCU065]
gi|374407630|gb|EHQ78483.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
VCU041]
gi|374408681|gb|EHQ79493.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
VCU057]
gi|374410162|gb|EHQ80923.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
VCU081]
gi|374820834|gb|EHR84910.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
VCU120]
gi|374826197|gb|EHR90105.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
VCU125]
gi|374827512|gb|EHR91374.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
VCU123]
gi|374835016|gb|EHR98647.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
VCU127]
gi|383359250|gb|EID36680.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus IS-K]
gi|383359490|gb|EID36913.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus IS-250]
gi|394235170|gb|EJD80744.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIHLM095]
gi|394237564|gb|EJD83050.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIHLM087]
gi|394241497|gb|EJD86911.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIHLM067]
gi|394243023|gb|EJD88397.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIHLM070]
gi|394249312|gb|EJD94525.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIHLM049]
gi|394254500|gb|EJD99469.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIHLM040]
gi|394265878|gb|EJE10524.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIHLM020]
gi|394266780|gb|EJE11405.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIHLM021]
gi|394270079|gb|EJE14602.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIHLM018]
gi|394278988|gb|EJE23300.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIHLM003]
gi|394283705|gb|EJE27870.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIH05005]
gi|394288935|gb|EJE32832.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIH04008]
gi|394290538|gb|EJE34393.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIH05001]
gi|394297471|gb|EJE41068.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIH05003]
gi|394302195|gb|EJE45643.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIH051668]
Length = 311
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 121/335 (36%), Positives = 179/335 (53%), Gaps = 30/335 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ VML E +D + + + +VDCTLG AGH+ ++ + I +D D +A+ A+
Sbjct: 4 HVSVMLNETID-YLNIKEDGVYVDCTLGGAGHALYLLNQLNDKGRLIAIDQDLTAIENAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L LH H NFR + ++L +++ VD I DLG+SS Q++ P
Sbjct: 63 EVLKEHLHKVTFVH-------NNFRELTNILNELE----IEKVDGIYYDLGVSSPQLDVP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D LDMRMD SL A +++N W + R+ YGEE + +I R
Sbjct: 112 ERGFSYHNDAKLDMRMDQTQSLSAYEVVNQWSYEALVRIFFRYGEEKFSKQIARRIEAHR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +T ELVD+I+ P + RR+G A RVFQA+RIAVNDEL E S+ +
Sbjct: 172 EQQPIETTLELVDVIKEGIPA-KARRKGG-HPAKRVFQAIRIAVNDELSAFEDSVEQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
C+ GGR+ VI+FHSLEDR+ KQ F ++ E + R + I E + ++
Sbjct: 230 CVKVGGRISVITFHSLEDRLCKQIF--------QEFEKGPDVPRGL--PVIPEAYTPKL- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
K + ++PIT + ++ N R RSAKLRV +
Sbjct: 279 -----KRVNRKPITATDDDLNENNRARSAKLRVAE 308
>gi|421894317|ref|ZP_16324807.1| S-adenosyl-methyltransferase MraW [Pediococcus pentosaceus IE-3]
gi|385272861|emb|CCG90179.1| S-adenosyl-methyltransferase MraW [Pediococcus pentosaceus IE-3]
Length = 314
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 123/319 (38%), Positives = 169/319 (52%), Gaps = 33/319 (10%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLL-HGQAHPHLKTHTF 195
+VDCTLG GHS I+ E D D +A+ + +L + GQ TF
Sbjct: 26 YVDCTLGGGGHSRLILSKLGENGHLYSFDQDQTAIDYNQKNLAEYVAKGQV-------TF 78
Query: 196 AK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQ 254
K NFR++K+ L + + GVD +L DLG+SS Q ++ ERGFS D PLDMRMD
Sbjct: 79 VKSNFRNLKNELNHLGID----GVDGVLYDLGVSSPQFDDAERGFSYRFDAPLDMRMDQT 134
Query: 255 ASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVT 314
L A +++N W ++ R+ YGEE + KI R + +TGEL DLI+S
Sbjct: 135 QKLNAREVVNEWSYNDLVRIFFRYGEEKYSKQVARKIESTREEKPIETTGELADLIKSAI 194
Query: 315 PGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDR 374
P RR G A ++FQA+RIAVNDEL LE SL L P GR+ VI+F SLEDR
Sbjct: 195 PAA-ARRTGG-HPAKKIFQAIRIAVNDELGALEESLEQALQILNPAGRISVITFQSLEDR 252
Query: 375 IVKQTFLSIIDHNREDAE-GNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAE 433
+VK+ F +E E G+ I D++ + K++ ++PI PS +
Sbjct: 253 LVKRMF-------KEQTEIGDLPAGLPIIPDDMKPKY----------KLINRKPIIPSED 295
Query: 434 EERLNCRCRSAKLRVIQKI 452
E N R SAKLR+I+K+
Sbjct: 296 ELEENRRSHSAKLRIIEKL 314
>gi|303228441|ref|ZP_07315274.1| S-adenosyl-methyltransferase MraW [Veillonella atypica
ACS-134-V-Col7a]
gi|303230798|ref|ZP_07317545.1| S-adenosyl-methyltransferase MraW [Veillonella atypica
ACS-049-V-Sch6]
gi|401679718|ref|ZP_10811642.1| S-adenosyl-methyltransferase MraW [Veillonella sp. ACP1]
gi|302514558|gb|EFL56553.1| S-adenosyl-methyltransferase MraW [Veillonella atypica
ACS-049-V-Sch6]
gi|302516943|gb|EFL58852.1| S-adenosyl-methyltransferase MraW [Veillonella atypica
ACS-134-V-Col7a]
gi|400218845|gb|EJO49716.1| S-adenosyl-methyltransferase MraW [Veillonella sp. ACP1]
Length = 310
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 129/335 (38%), Positives = 177/335 (52%), Gaps = 33/335 (9%)
Query: 115 SHIPVMLGEVLD-VFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAK 173
+H+ V+L E +D V ++ I +VDCTLG AGH+ A+ + IG+D D ALA
Sbjct: 4 NHVSVLLNETVDSVVTNPDGI--YVDCTLGGAGHAHAVGERLSSQGMIIGLDQDEDALAV 61
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
AR L+ L + T NF +K L + + I VD + DLG+SS Q++
Sbjct: 62 ARQRLSDLT-------CQVMTIPTNFSDLKHALEE--QGIYE--VDGFIFDLGVSSYQLD 110
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
PERGFS + DGPLDMRMD +A + AE ++N + ++ +++R+YGEE + IV
Sbjct: 111 TPERGFSYMNDGPLDMRMDKEAPITAEIVVNEYESDKLLQIIRDYGEERWAKRIVEFIVA 170
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +TGELV +I+ P RQ A R FQA+RI VN EL L S
Sbjct: 171 ARNEKRITTTGELVSIIKKAIPA--KARQDGPHPAKRTFQAIRIEVNRELAILHDSFVDA 228
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
L P GR+GVI+FHSLEDRI KQTF + A EL + +
Sbjct: 229 VSMLKPKGRIGVITFHSLEDRITKQTFKEL-----STACICPPEL------PVCVCHHKA 277
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRV 448
+++ N + I PSA E +N R RSAKLRV
Sbjct: 278 VLKAKN------KAIEPSAGEVEMNPRSRSAKLRV 306
>gi|418324609|ref|ZP_12935843.1| S-adenosyl-methyltransferase MraW [Staphylococcus pettenkoferi
VCU012]
gi|365225296|gb|EHM66541.1| S-adenosyl-methyltransferase MraW [Staphylococcus pettenkoferi
VCU012]
Length = 311
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 129/336 (38%), Positives = 179/336 (53%), Gaps = 32/336 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ VML E +D + + + ++VDCTLG AGH+ ++ + I +D D ALA AR
Sbjct: 4 HVSVMLKETID-YLNVKADGTYVDCTLGGAGHALYLLNQLGDQGRLIAIDQDQHALANAR 62
Query: 176 AHLNSLLHGQAHPHLKTHTFA-KNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L HL TF NFR+I +L D NI VD I DLG+SS Q++
Sbjct: 63 EVLKD--------HLDKVTFIHSNFRNITEILN--DLNI--EKVDGIYYDLGVSSPQLDV 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
PERGFS D LDMRMD L A +I+N+W ++ R+ YGEE + +I Q
Sbjct: 111 PERGFSYHHDAKLDMRMDQTQDLTAYEIVNTWSFHDLMRIFNRYGEEKFAKQIARRIEQH 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + + +T +LVD+I+ P + RR+G A RVFQA+RIAVNDEL E SL
Sbjct: 171 REKEPIETTLQLVDIIKEGIPA-KARRKGG-HPAKRVFQAIRIAVNDELAAFEDSLEQAI 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
GR+ VISFHSLEDR+ KQ F ++ E + R + + E + ++
Sbjct: 229 AHTEVNGRISVISFHSLEDRLCKQMF--------QEYEKGPDVPRGV--PVLPEEYTPKL 278
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
K + ++PIT + E+ N R RSAKLRV +
Sbjct: 279 ------KRVNRKPITATEEDLEDNNRARSAKLRVAE 308
>gi|238019059|ref|ZP_04599485.1| hypothetical protein VEIDISOL_00921 [Veillonella dispar ATCC 17748]
gi|237864314|gb|EEP65604.1| hypothetical protein VEIDISOL_00921 [Veillonella dispar ATCC 17748]
Length = 310
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 127/340 (37%), Positives = 176/340 (51%), Gaps = 35/340 (10%)
Query: 115 SHIPVMLGEVLD-VFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAK 173
+H V+L E +D V ++ + I +VDCTLG AGH+ A+ + IG+D D AL+
Sbjct: 4 NHTSVLLRETVDSVVTNPKGI--YVDCTLGGAGHAHAVGEMLDPEGMIIGLDQDEDALSV 61
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
AR L+ L + T NF ++K L +E I VD + DLG+SS Q++
Sbjct: 62 ARQRLSDLT-------CQVLTIPTNFSNLKEALH--NEGIYE--VDGFIFDLGVSSYQLD 110
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
PERGFS + DGPLDMRMD A L AE+++N + + +++R+YGEE + I+
Sbjct: 111 TPERGFSYMNDGPLDMRMDKDAPLTAEEVVNEYDADALLQIIRDYGEERWAKRIVEFIIN 170
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +TGELV +I+ P RQ A R FQA+RI VN EL L S
Sbjct: 171 ARQEKRITTTGELVRIIKQAIPA--KARQDGPHPAKRTFQAIRIEVNRELAILHDSFVDA 228
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
L P G++GVI+FHSLEDRI KQTF + + I +
Sbjct: 229 VSMLKPKGKIGVITFHSLEDRITKQTF------------------KELSTACICPPELPM 270
Query: 414 IIQGWNGKILTK-RPITPSAEEERLNCRCRSAKLRVIQKI 452
+ + K + I PSA E +N R RSAKLRV K+
Sbjct: 271 CVCNHKAVVKAKNKAIEPSAGEIEVNPRARSAKLRVAVKL 310
>gi|422810117|ref|ZP_16858528.1| rRNA small subunit methyltransferase H [Listeria monocytogenes FSL
J1-208]
gi|378751781|gb|EHY62369.1| rRNA small subunit methyltransferase H [Listeria monocytogenes FSL
J1-208]
Length = 312
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 130/340 (38%), Positives = 176/340 (51%), Gaps = 36/340 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D+ + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 4 HETVLLHETVDMLEV-KPDGIYVDATLGGAGHSEYLLNKLNEKGHLFAFDQDQTAIDNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L + TF K NFR +K L + I VD IL DLG+SS Q++
Sbjct: 63 IKLAD--------YSDKVTFIKANFRDMKEALNE--RGI--EAVDGILYDLGVSSPQLDE 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS D LDMRMD + L A+ ++N W ++ R+ +YGEE + +I +
Sbjct: 111 RERGFSYHQDAALDMRMDQEQELTAKTVVNEWSYQDLIRIFFQYGEEKFSKQIAREIERR 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +TGELVD+I++ P R+ G R FQA+RIAVNDEL +E SL
Sbjct: 171 REVKPIETTGELVDIIKTAIPAPARRKGGH--PGKRTFQAIRIAVNDELGAVEDSLEKAL 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNINETWIR 412
L PGGR+ VI+FHSLEDRI KQ F +E +G + L I D+
Sbjct: 229 TLLKPGGRISVITFHSLEDRITKQLF-------QEATKGPDLPPGLPVIPDE-------- 273
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ K+ T++PI PS EE N R RSAKLRVI+KI
Sbjct: 274 ---YKPDFKLATRKPIVPSEEELEQNNRARSAKLRVIEKI 310
>gi|227824963|ref|ZP_03989795.1| S-adenosyl-methyltransferase mraW [Acidaminococcus sp. D21]
gi|352684908|ref|YP_004896893.1| S-adenosyl-methyltransferase mraW [Acidaminococcus intestini
RyC-MR95]
gi|226905462|gb|EEH91380.1| S-adenosyl-methyltransferase mraW [Acidaminococcus sp. D21]
gi|350279563|gb|AEQ22753.1| S-adenosyl-methyltransferase mraW [Acidaminococcus intestini
RyC-MR95]
Length = 311
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 124/338 (36%), Positives = 173/338 (51%), Gaps = 34/338 (10%)
Query: 116 HIPVMLGEVLD-VFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
H V+L E +D + + + I +VDCTLG AGHS AI L IG+D D A+ A
Sbjct: 7 HKSVLLRESVDWIVTDPKGI--YVDCTLGGAGHSHAIAEELDPEGLLIGIDQDEDAIMAA 64
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L K NFR+ LG I E + VD I DLG+SS Q++
Sbjct: 65 SKRLED-------AACKVKIVHSNFRN----LGTILEGLNLQEVDGIFFDLGVSSYQLDT 113
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
PERGFS + DGPLDMRMD + L A D++N++ + ++ ++ +YGEE + IV+
Sbjct: 114 PERGFSYMHDGPLDMRMDQEGKLTAADVVNTYKEEDLADLIYKYGEERWSRRIAQFIVEK 173
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R L +T +LV +I++ P + RQ A R FQA+RI VNDELK L+S++
Sbjct: 174 RKEKPLRTTSDLVSVIKAAIP--KKARQDGPHPAKRTFQAIRIEVNDELKILDSTMETAV 231
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
L GGR+GVI+FHSLEDRI+KQ+F + + I +
Sbjct: 232 KHLKKGGRIGVITFHSLEDRIIKQSF------------------KRMAKGCICPPELPVC 273
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ G ++ + PS E N R RSA+LR KI
Sbjct: 274 VCGHKPELKKLKEFIPSETELEDNPRARSARLRGAIKI 311
>gi|15643635|ref|NP_228681.1| S-adenosyl-methyltransferase MraW [Thermotoga maritima MSB8]
gi|403252612|ref|ZP_10918921.1| 16S rRNA m(4)C1402 methyltransferase [Thermotoga sp. EMP]
gi|418044959|ref|ZP_12683055.1| S-adenosyl-methyltransferase MraW [Thermotoga maritima MSB8]
gi|8134815|sp|Q9WZX6.1|RSMH_THEMA RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|4981407|gb|AAD35954.1|AE001753_10 conserved hypothetical protein [Thermotoga maritima MSB8]
gi|351678041|gb|EHA61188.1| S-adenosyl-methyltransferase MraW [Thermotoga maritima MSB8]
gi|402812102|gb|EJX26582.1| 16S rRNA m(4)C1402 methyltransferase [Thermotoga sp. EMP]
Length = 299
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 178/345 (51%), Gaps = 52/345 (15%)
Query: 109 IQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDP 168
+++ HIPVM+ EV++ F +DCT+G GHS AI+ P ++ IG+DVD
Sbjct: 1 MRKYSQRHIPVMVREVIE-FLKPEDEKIILDCTVGEGGHSRAILEHCPGCRI-IGIDVDS 58
Query: 169 SALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMS 228
L A L + F ++R +L + VD ILMDLG+S
Sbjct: 59 EVLRIAEEKLKEFSD-------RVSLFKVSYREADFLLKTLG----IEKVDGILMDLGVS 107
Query: 229 SMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNW-HLL 287
+ Q+ RGF+ + PLDMRMD ++ + A+ +LN P+ E+ R++ EYGEE + +
Sbjct: 108 TYQLKGENRGFTFEREEPLDMRMDLESEVTAQKVLNELPEEELARIIFEYGEEKRFARRI 167
Query: 288 QNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLE 347
KIV+ R L++T +LV ++ P RR+ AT+ FQA+RI VN EL+ L+
Sbjct: 168 ARKIVENR---PLNTTLDLVKAVREALPSYEIRRRKR-HFATKTFQAIRIYVNRELENLK 223
Query: 348 SSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNIN 407
L D L PGGR+ VISFHSLEDRIVK+TF N ++LR
Sbjct: 224 EFLKKAEDLLNPGGRIVVISFHSLEDRIVKETF------------RNSKKLR-------- 263
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
ILT++P+ PS EE R N R RS +LR ++I
Sbjct: 264 --------------ILTEKPVRPSEEEIRENPRARSGRLRAAERI 294
>gi|121535927|ref|ZP_01667723.1| S-adenosyl-methyltransferase MraW [Thermosinus carboxydivorans
Nor1]
gi|121305498|gb|EAX46444.1| S-adenosyl-methyltransferase MraW [Thermosinus carboxydivorans
Nor1]
Length = 313
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 126/319 (39%), Positives = 175/319 (54%), Gaps = 36/319 (11%)
Query: 137 FVDCTLGAAGHSSAII-RAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTF 195
+VDCTLG GHS+ I R PE L IG+D DP+A+A +A L A +
Sbjct: 28 YVDCTLGGGGHSALIASRLSPEGWL-IGIDQDPAAIAAGQARL-------AGASCRIDLV 79
Query: 196 AKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQA 255
NF ++ +L + VD +L DLG+SS Q++ +RGFS + D PLDMRMDP A
Sbjct: 80 RDNFSNLSRILTTLGIE----SVDGVLFDLGVSSHQLDVAQRGFSYMQDAPLDMRMDPSA 135
Query: 256 SLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTP 315
+ A D++N++ + ++ R++R+YGEE + IVQAR+ + +TG+L D+I+ P
Sbjct: 136 PISAYDVVNTYSEDDLTRIIRDYGEERWARRIAQFIVQARMTAPICTTGQLTDIIKRAIP 195
Query: 316 GMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRI 375
RR G A R FQA+RI VN+EL L+ + L GGR+ +I+FHSLEDRI
Sbjct: 196 AA-ARRDGP-HPAKRTFQAIRIEVNNELSILQDAFITAVQFLKCGGRICIITFHSLEDRI 253
Query: 376 VKQTFLSIIDHNREDAEG--NEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAE 433
K T S+ A+G +L N + KIL K PITP+AE
Sbjct: 254 AKHTLQSL-------AKGCVCPPQLPICVCHNKPKL-----------KILGK-PITPTAE 294
Query: 434 EERLNCRCRSAKLRVIQKI 452
E N R RSAKLRV +K+
Sbjct: 295 ELDDNHRARSAKLRVAEKV 313
>gi|347549437|ref|YP_004855765.1| hypothetical protein LIV_2020 [Listeria ivanovii subsp. ivanovii
PAM 55]
gi|346982508|emb|CBW86506.1| Putative unknown protein [Listeria ivanovii subsp. ivanovii PAM 55]
Length = 312
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 130/340 (38%), Positives = 178/340 (52%), Gaps = 36/340 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D+ + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 4 HETVLLHETVDMLEV-KPDGIYVDATLGGAGHSEYLLNKLNEKGHLFAFDQDQTAIDNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L + + TF K NFR++K L D I S VD IL DLG+SS Q++
Sbjct: 63 IKLAA--------YSDKVTFVKANFRYMKETLN--DRGI--SEVDGILYDLGVSSPQLDE 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS D LDMRMD + L A+ ++N W ++ R+ +YGEE + +I +
Sbjct: 111 RERGFSYHQDAALDMRMDREQELTAKIVVNEWSYQDLIRIFFQYGEEKFSKQIAREIERR 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +TGELVD+I++ P R+ G R FQA+RIAVNDEL +E SL
Sbjct: 171 REVKPIETTGELVDIIKTAIPAPARRKGGH--PGKRTFQAIRIAVNDELGAVEDSLAEAL 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNINETWIR 412
+ PGGR+ VI+FHSLEDRI K F +E +G + L I D+
Sbjct: 229 TLIKPGGRISVITFHSLEDRITKHLF-------QEATKGPDLPPGLPVIPDE-------- 273
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ K+ T++PI PS EE N R RSAKLRVI+KI
Sbjct: 274 ---YKPDFKLATRKPIVPSEEELEQNNRARSAKLRVIEKI 310
>gi|57866678|ref|YP_188327.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
RP62A]
gi|242242461|ref|ZP_04796906.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
W23144]
gi|416124417|ref|ZP_11595413.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
FRI909]
gi|418329232|ref|ZP_12940311.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
14.1.R1.SE]
gi|418612933|ref|ZP_13175954.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
VCU117]
gi|418613979|ref|ZP_13176969.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
VCU118]
gi|418626787|ref|ZP_13189383.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
VCU126]
gi|418631975|ref|ZP_13194419.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
VCU128]
gi|418634004|ref|ZP_13196402.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
VCU129]
gi|420175053|ref|ZP_14681498.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIHLM061]
gi|420189648|ref|ZP_14695616.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIHLM037]
gi|420192797|ref|ZP_14698654.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIHLM023]
gi|420204101|ref|ZP_14709661.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIHLM015]
gi|420234338|ref|ZP_14738902.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIH051475]
gi|68565427|sp|Q5HQ13.1|RSMH_STAEQ RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|57637336|gb|AAW54124.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
RP62A]
gi|242234035|gb|EES36347.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
W23144]
gi|319401527|gb|EFV89737.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
FRI909]
gi|365230894|gb|EHM71969.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
14.1.R1.SE]
gi|374817243|gb|EHR81428.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
VCU117]
gi|374821848|gb|EHR85889.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
VCU118]
gi|374831331|gb|EHR95073.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
VCU126]
gi|374833644|gb|EHR97319.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
VCU128]
gi|374837996|gb|EHS01553.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
VCU129]
gi|394244339|gb|EJD89684.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIHLM061]
gi|394260613|gb|EJE05422.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIHLM023]
gi|394260983|gb|EJE05785.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIHLM037]
gi|394274115|gb|EJE18540.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIHLM015]
gi|394304300|gb|EJE47706.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIH051475]
Length = 311
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 120/335 (35%), Positives = 180/335 (53%), Gaps = 30/335 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ VML E +D + + + +VDCTLG AGH+ ++ + I +D D +A+ A+
Sbjct: 4 HVSVMLNETID-YLNIKEDGVYVDCTLGGAGHALYLLNQLNDKGRLIAIDQDLTAIENAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L LH H NFR + ++L +++ + VD I DLG+SS Q++ P
Sbjct: 63 EVLKEHLHKVTFVH-------NNFRELTNILNELEID----KVDGIYYDLGVSSPQLDVP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D LDMRMD SL A +++N W + ++ YGEE + +I R
Sbjct: 112 ERGFSYHNDAKLDMRMDQTQSLSAYEVVNQWSYEALVKIFYRYGEEKFSKQIARRIEAHR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +T ELVD+I+ P + RR+G A RVFQA+RIAVNDEL E S+ +
Sbjct: 172 EQQPIETTLELVDVIKEGIPA-KARRKGG-HPAKRVFQAIRIAVNDELSAFEDSVEQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
C+ GGR+ VI+FHSLEDR+ KQ F ++ E + R + I E + ++
Sbjct: 230 CVKVGGRISVITFHSLEDRLCKQIF--------QEFEKGPDVPRGL--PVIPEAYTPKL- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
K + ++PIT + ++ N R RSAKLRV +
Sbjct: 279 -----KRVNRKPITATDDDLNENNRARSAKLRVAE 308
>gi|386360425|ref|YP_006058670.1| S-adenosyl-methyltransferase MraW [Thermus thermophilus JL-18]
gi|383509452|gb|AFH38884.1| S-adenosyl-methyltransferase MraW [Thermus thermophilus JL-18]
Length = 282
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 127/338 (37%), Positives = 179/338 (52%), Gaps = 61/338 (18%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
+H+PV+ E LD+ + R +VD TLG AGH+ I+ + IG+D DP A+A+A
Sbjct: 2 THVPVLYQEALDLLAV-RPGGVYVDATLGGAGHARGILERGGRV---IGLDQDPEAVARA 57
Query: 175 RA-HLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
++ HL L Q NFRH+K L + + R VD IL DLG+SS ++
Sbjct: 58 KSLHLPGLTVVQG-----------NFRHLKRHLAAL--GVER--VDGILADLGVSSFHLD 102
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
+P RGFS +GPLDMRM + A++++N P + R+LRE GEE + + IV
Sbjct: 103 DPSRGFSYQKEGPLDMRMGLEGP-TAKEVVNRLPLEALARLLRELGEEPQAYRIARAIVA 161
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + + +T +L ++++ G R R G A + FQALRI VNDEL L+ L
Sbjct: 162 AREKAPIETTTQLAEIVRKAV-GFR--RAGH--PARKTFQALRIYVNDELNALKEFLEQA 216
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
+ LAPGGRL VI+FHSLEDR+VK R +R+ +
Sbjct: 217 AEVLAPGGRLVVIAFHSLEDRVVK---------------------RFLRESGL------- 248
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K+LTK+P+ PS +E N R RSAKLR +K
Sbjct: 249 -------KVLTKKPLVPSEKEAAQNPRARSAKLRAAEK 279
>gi|310779075|ref|YP_003967408.1| S-adenosyl-methyltransferase MraW [Ilyobacter polytropus DSM 2926]
gi|309748398|gb|ADO83060.1| S-adenosyl-methyltransferase MraW [Ilyobacter polytropus DSM 2926]
Length = 314
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 117/338 (34%), Positives = 182/338 (53%), Gaps = 35/338 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HIPV+ E ++ + ++DCTLG GHS I++A E I +D D AL A
Sbjct: 10 HIPVLYRETIENLVKNEG-GVYLDCTLGGGGHSEGILKALSEKGKLISIDQDQQALDFAG 68
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L +G+ K ++ NF ++ +VL + +D ILMD+G+SS Q+++P
Sbjct: 69 ERLGK--YGK-----KWESYKDNFENLDTVLYLAGYD----KIDGILMDIGVSSTQLDDP 117
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D LDMRM+ A + A +++N + + + +++ +YGEE + + I + R
Sbjct: 118 ERGFSYRFDTKLDMRMNKNAKVSAYEVVNQYEEGRLSKIIYDYGEERHARKIARLICEIR 177
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +TG+LV++I+ G + A + FQA+RI VN EL LE S+ +
Sbjct: 178 AEKPIETTGDLVEIIKRAYKGKSPKH-----PAMKTFQAIRIEVNRELDVLERSIDKAIN 232
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSI-IDHNREDAEGNEEELRNIRDDNINETWIRQI 414
L PGGRL +I+FHSLEDR+VK F + +D EL R DN +
Sbjct: 233 ALKPGGRLAIITFHSLEDRMVKNKFKEMSVDCI------CPPELPVCRCDNKAKV----- 281
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
KI+T++PITP +E + N R RS+KLRV++++
Sbjct: 282 ------KIITRKPITPKDDELKFNKRARSSKLRVVERL 313
>gi|251810609|ref|ZP_04825082.1| S-adenosyl-methyltransferase [Staphylococcus epidermidis
BCM-HMP0060]
gi|282876390|ref|ZP_06285257.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
SK135]
gi|417660122|ref|ZP_12309713.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
VCU045]
gi|417909737|ref|ZP_12553470.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
VCU037]
gi|417913407|ref|ZP_12557074.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
VCU109]
gi|420165282|ref|ZP_14671986.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIHLM088]
gi|420206500|ref|ZP_14712010.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIHLM008]
gi|420222029|ref|ZP_14726954.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIH08001]
gi|420224891|ref|ZP_14729729.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIH06004]
gi|420229292|ref|ZP_14733998.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIH04003]
gi|421607319|ref|ZP_16048565.1| 16S rRNA m(4)C1402 methyltransferase [Staphylococcus epidermidis
AU12-03]
gi|251805769|gb|EES58426.1| S-adenosyl-methyltransferase [Staphylococcus epidermidis
BCM-HMP0060]
gi|281295415|gb|EFA87942.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
SK135]
gi|329734446|gb|EGG70759.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
VCU045]
gi|341652346|gb|EGS76134.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
VCU037]
gi|341655689|gb|EGS79413.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
VCU109]
gi|394236449|gb|EJD81983.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIHLM088]
gi|394278339|gb|EJE22656.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIHLM008]
gi|394290060|gb|EJE33930.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIH08001]
gi|394294294|gb|EJE37980.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIH06004]
gi|394299058|gb|EJE42609.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIH04003]
gi|406657111|gb|EKC83504.1| 16S rRNA m(4)C1402 methyltransferase [Staphylococcus epidermidis
AU12-03]
Length = 311
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 121/335 (36%), Positives = 179/335 (53%), Gaps = 30/335 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ VML E +D + + + +VDCTLG AGH+ ++ + I +D D +A+ A+
Sbjct: 4 HVSVMLNETID-YLNIKEDGVYVDCTLGGAGHALYLLNQLNDKGRLIAIDQDLTAIENAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L LH H NFR + ++L +++ VD I DLG+SS Q++ P
Sbjct: 63 EVLKEHLHKVTFVH-------NNFRELTNILNELE----IEKVDGIYYDLGVSSPQLDVP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D LDMRMD SL A +++N W + R+ YGEE + +I R
Sbjct: 112 ERGFSYHNDAKLDMRMDQTQSLSAYEVVNQWSYEALVRIFFRYGEEKFSKQIARRIEAHR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +T ELVD+I+ P + RR+G A RVFQA+RIAVNDEL E S+ +
Sbjct: 172 EQQPIETTLELVDVIKEGIPA-KARRKGG-HPAKRVFQAIRIAVNDELSAFEDSVEQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
C+ GGR+ VI+FHSLEDR+ KQ F ++ E + R + I E + ++
Sbjct: 230 CVKVGGRISVITFHSLEDRLCKQIF--------QEFEKGPDVPRGL--PVIPEAYTPKL- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
K + ++PIT + ++ N R RSAKLRV +
Sbjct: 279 -----KRVNRKPITATDDDLNDNNRARSAKLRVAE 308
>gi|418325036|ref|ZP_12936246.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
VCU071]
gi|365228942|gb|EHM70114.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
VCU071]
Length = 311
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 121/335 (36%), Positives = 179/335 (53%), Gaps = 30/335 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ VML E +D + + + +VDCTLG AGH+ ++ + I +D D +A+ A+
Sbjct: 4 HVSVMLNETID-YLNIKEDGVYVDCTLGGAGHALYLLNQLNDKGRLIAIDQDLTAIENAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L LH H NFR + ++L +++ VD I DLG+SS Q++ P
Sbjct: 63 EVLKEHLHKVTFVH-------NNFRELTNILNELE----IEKVDGIYYDLGVSSPQLDVP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D LDMRMD SL A +++N W + R+ YGEE + +I R
Sbjct: 112 ERGFSYHNDAKLDMRMDQTQSLSAYEVVNQWSYEALVRIFFRYGEEKFSKQIARRIEAHR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +T ELVD+I+ P + RR+G A RVFQA+RIAVNDEL E S+ +
Sbjct: 172 EQQPIETTLELVDVIKEGIPA-KARRKGG-HPAKRVFQAIRIAVNDELSAFEDSVEQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
C+ GGR+ VI+FHSLEDR+ KQ F ++ E + R + I E + ++
Sbjct: 230 CVKVGGRISVITFHSLEDRLCKQIF--------QEFEKGPDVPRGL--PVIPEAYTPKL- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
K + ++PIT + ++ N R RSAKLRV +
Sbjct: 279 -----KRVNRKPITATDDDLSENNRARSAKLRVAE 308
>gi|325001098|ref|ZP_08122210.1| 16S rRNA m(4)C1402 methyltranserfase [Pseudonocardia sp. P1]
Length = 337
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 111/270 (41%), Positives = 153/270 (56%), Gaps = 22/270 (8%)
Query: 116 HIPVMLGEVLDVFSSS--RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAK 173
H PV+L V + + + +VD TLG GH++A++ HP+L + +G+D DP AL
Sbjct: 16 HTPVLLERVSALLAPAIADRPAVYVDATLGMGGHAAALLATHPQLTV-VGLDRDPQALDL 74
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGV---DAILMDLGMSSM 230
A L + +A R + +V +I E + +GV DAIL DLG+SS+
Sbjct: 75 AGRRLTA--------------YADRLRPVHAVYDRIGEALDETGVGPADAILFDLGVSSL 120
Query: 231 QVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNK 290
Q++ ERGFS D LDMRMDP A D+LN++ ++ R+LREYGEE + N
Sbjct: 121 QLDEVERGFSYSRDADLDMRMDPTTGPTAADVLNTYTAPQLRRILREYGEERFAGPIANA 180
Query: 291 IVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSL 350
IV+ R + + ELV+L+ V P RR G A R FQALRI VN EL L +L
Sbjct: 181 IVRNRDKRPFTRSAELVELLYGVVPAA-SRRTGG-HPAKRTFQALRIEVNAELDVLRDAL 238
Query: 351 HACFDCLAPGGRLGVISFHSLEDRIVKQTF 380
A FD LAPGGR+ V+++HSLEDRI K+
Sbjct: 239 PAAFDALAPGGRIVVLAYHSLEDRITKRAL 268
>gi|417986634|ref|ZP_12627201.1| rRNA small subunit methyltransferase H [Lactobacillus casei 32G]
gi|410525220|gb|EKQ00124.1| rRNA small subunit methyltransferase H [Lactobacillus casei 32G]
Length = 313
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 122/317 (38%), Positives = 172/317 (54%), Gaps = 30/317 (9%)
Query: 136 SFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTF 195
++VD TLG GH+ I+ +L I D D +A+A A +L H
Sbjct: 25 TYVDATLGRGGHTRQILNQLTTGRL-IAFDQDEAAIATVTADFGTLPKQLTLVH------ 77
Query: 196 AKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQA 255
+NFR + L + + VD IL DLG+SS Q ++ +RGFS D PLDMRMD +
Sbjct: 78 -RNFRDLTDALTTLG----ITAVDGILYDLGVSSPQFDDSKRGFSYRFDAPLDMRMDQRQ 132
Query: 256 SLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTP 315
+L A+ I+N WP A++ R+ YGEE + +I QAR + +T +LV+LI++ P
Sbjct: 133 TLDAKTIVNEWPYADLVRIFSRYGEEHFSKQIARRIEQARTVQPITTTFQLVELIKAGIP 192
Query: 316 GMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRI 375
+ RR G A +VFQA+RIAVNDEL LESSL + GGR+ VI+F SLEDR+
Sbjct: 193 A-KARRTGG-HPAKKVFQAIRIAVNDELSALESSLEQALKLINVGGRISVITFQSLEDRL 250
Query: 376 VKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEE 435
VK F +E+ +++D I Q N +++ ++PI PS EE
Sbjct: 251 VKTMF---------------KEVSSVQDVPRGLPVIPASAQP-NYRLVNRKPILPSEEEL 294
Query: 436 RLNCRCRSAKLRVIQKI 452
+N R SAKLRVI+KI
Sbjct: 295 AVNHRAHSAKLRVIEKI 311
>gi|331269345|ref|YP_004395837.1| S-adenosyl-methyltransferase MraW [Clostridium botulinum BKT015925]
gi|329125895|gb|AEB75840.1| S-adenosyl-methyltransferase MraW [Clostridium botulinum BKT015925]
Length = 309
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 122/338 (36%), Positives = 191/338 (56%), Gaps = 32/338 (9%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
+H+PV+L E +D + +VDCTLG AGHSS I++ + IG+D D +AL A
Sbjct: 4 NHVPVLLEETIDSLNIKED-GIYVDCTLGGAGHSSHILKRLSKRGKLIGIDQDVNALKAA 62
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+ L + + H NF ++ SVL ++ NI + VD ILMDLG+SS Q++
Sbjct: 63 KERLKNY-DNVIYVH-------NNFYNLASVLDEL--NIEK--VDGILMDLGVSSYQLDT 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS + D LDMRM+ + S+ A +++N + + E+ R+++EYGEE + IV+
Sbjct: 111 AERGFSYMQDAMLDMRMNTEESISAYNVVNEYSEEELFRIIKEYGEERFARKIAKAIVKQ 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +T +LV +I++V P M+ ++ G A + FQA+RI VN EL+ L ++
Sbjct: 171 REIEPVKTTLDLVKIIKNVIP-MKFQQGGH--PAKKTFQAIRIEVNHELEILNKTIEDGV 227
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
L GR+ VI+FHSLEDRIVK F + E ++ + ++ +
Sbjct: 228 KHLNLDGRISVITFHSLEDRIVKTKFKKL-----------ENPCTCPKEFPVCICGMKPV 276
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ K++T++P+ PS +E+ N R RS+KLRV QKI
Sbjct: 277 V-----KVITRKPLEPSEDEKENNSRSRSSKLRVAQKI 309
>gi|315304096|ref|ZP_07874497.1| S-adenosyl-methyltransferase MraW [Listeria ivanovii FSL F6-596]
gi|313627537|gb|EFR96269.1| S-adenosyl-methyltransferase MraW [Listeria ivanovii FSL F6-596]
Length = 312
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 128/339 (37%), Positives = 177/339 (52%), Gaps = 34/339 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D+ + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 4 HETVLLHETVDMLEV-KPDGIYVDATLGGAGHSEYLLNKLNEKGHLFAFDQDQTAIDNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L + + TF K NFR++K L + I S VD IL DLG+SS Q++
Sbjct: 63 IKLAA--------YSDKVTFVKSNFRYMKEALNE--RGI--SEVDGILYDLGVSSPQLDE 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS D LDMRMD + L A+ ++N W ++ R+ +YGEE + +I +
Sbjct: 111 RERGFSYHQDAALDMRMDREQELTAKIVVNEWSYQDLIRIFFQYGEEKFSKQIAREIERR 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +TGELVD+I++ P R+ G R FQA+RIAVNDEL +E SL
Sbjct: 171 REVKPIETTGELVDIIKTAIPAPARRKGGH--PGKRTFQAIRIAVNDELGAVEDSLEKAL 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEEL-RNIRDDNINETWIRQ 413
+ PGGR+ VI+FHSLEDRI K F +E +G + L + D +
Sbjct: 229 TLITPGGRISVITFHSLEDRITKHLF-------QEATKGPDLPLGLPVIPDEYKPDF--- 278
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
K+ T++PI PS EE N R RSAKLRVI+KI
Sbjct: 279 -------KLATRKPIVPSEEELEQNNRARSAKLRVIEKI 310
>gi|55981045|ref|YP_144342.1| S-adenosyl-methyltransferase MraW [Thermus thermophilus HB8]
gi|68565453|sp|Q5SJD8.1|RSMH_THET8 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|56966831|pdb|1WG8|A Chain A, Crystal Structure Of A Predicted S-Adenosylmethionine-
Dependent Methyltransferase Tt1512 From Thermus
Thermophilus Hb8.
gi|56966832|pdb|1WG8|B Chain B, Crystal Structure Of A Predicted S-Adenosylmethionine-
Dependent Methyltransferase Tt1512 From Thermus
Thermophilus Hb8.
gi|55772458|dbj|BAD70899.1| conserved hypothetical protein [Thermus thermophilus HB8]
Length = 285
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 127/338 (37%), Positives = 178/338 (52%), Gaps = 61/338 (18%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
+H+PV+ E LD+ + R +VD TLG AGH+ I+ + IG+D DP A+A+A
Sbjct: 5 THVPVLYQEALDLLAV-RPGGVYVDATLGGAGHARGILERGGRV---IGLDQDPEAVARA 60
Query: 175 RA-HLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
+ HL L Q NFRH+K L + + R VD IL DLG+SS ++
Sbjct: 61 KGLHLPGLTVVQG-----------NFRHLKRHLAAL--GVER--VDGILADLGVSSFHLD 105
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
+P RGFS +GPLDMRM + A++++N P + R+LRE GEE + + IV
Sbjct: 106 DPSRGFSYQKEGPLDMRMGLEGP-TAKEVVNRLPLEALARLLRELGEEPQAYRIARAIVA 164
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + + +T +L ++++ G R R G A + FQALRI VNDEL L+ L
Sbjct: 165 AREKAPIETTTQLAEIVRKAV-GFR--RAGH--PARKTFQALRIYVNDELNALKEFLEQA 219
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
+ LAPGGRL VI+FHSLEDR+VK R +R+ +
Sbjct: 220 AEVLAPGGRLVVIAFHSLEDRVVK---------------------RFLRESGL------- 251
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K+LTK+P+ PS +E N R RSAKLR +K
Sbjct: 252 -------KVLTKKPLVPSEKEAAQNPRARSAKLRAAEK 282
>gi|73662901|ref|YP_301682.1| S-adenosyl-methyltransferase MraW [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
gi|88909221|sp|Q49WW1.1|RSMH_STAS1 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|72495416|dbj|BAE18737.1| putative methyltransferase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 311
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 125/335 (37%), Positives = 177/335 (52%), Gaps = 30/335 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ VML E +D + + + +VDCTLG AGH+ ++ + I +D D +A+ A+
Sbjct: 4 HVSVMLKETID-YLNIKEDGVYVDCTLGGAGHALYLLNQLGDEGRLIAIDQDTTAIENAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L LH H NFR I +L D NI VD I DLG+SS Q++ P
Sbjct: 63 EVLKEHLHKVTFVH-------NNFRKITEILN--DLNI--EKVDGIYYDLGVSSPQLDVP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D LDMRMD SL A +++N W ++ R+ YGEE + +I Q R
Sbjct: 112 ERGFSYHHDAKLDMRMDQTQSLSAFEVVNEWEFEKLVRIFHRYGEEKFSKQIARRIEQNR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +T ELVD+I+ P + RR+G A R+FQA+RIAVNDEL E SL D
Sbjct: 172 EQKPIETTLELVDVIKEGIPA-KARRKGG-HPAKRIFQAIRIAVNDELSAFEDSLEQAID 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
+ GR+ VI+FHSLEDR+ KQ F ++ E + R + I E + ++
Sbjct: 230 AVKMDGRISVITFHSLEDRLCKQMF--------QEYEKGPDVPRGL--PVIPEAYTPKL- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
K + ++PI + E+ N R RSAKLRV +
Sbjct: 279 -----KRVNRKPIIATDEDLEENNRARSAKLRVAE 308
>gi|251783120|ref|YP_002997423.1| S-adenosyl-methyltransferase MraW [Streptococcus dysgalactiae
subsp. equisimilis GGS_124]
gi|242391750|dbj|BAH82209.1| S-adenosyl-methyltransferase mraW [Streptococcus dysgalactiae
subsp. equisimilis GGS_124]
Length = 337
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 123/348 (35%), Positives = 189/348 (54%), Gaps = 37/348 (10%)
Query: 109 IQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDP 168
+ ++ H+ V+L E +D+ + +VD TLG +GHS+ ++ E D D
Sbjct: 21 VMTKEFHHVTVLLHETVDMLDI-KPNGIYVDATLGGSGHSAYLLSKLSEQGHLYCFDQDQ 79
Query: 169 SALAKARAHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQ--IDENILRSGVDAILMD 224
A+ A+ L S + GQ TF K NFRH+K+ L +DE +D IL D
Sbjct: 80 KAIDNAQVTLKSYIDKGQV-------TFIKDNFRHLKARLTALGVDE------IDGILYD 126
Query: 225 LGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNW 284
LG+SS Q++ ERGFS D PLDMRMD QA L A D++N++P ++ ++ +YGE+
Sbjct: 127 LGVSSPQLDERERGFSYNQDAPLDMRMDRQAPLTAYDVVNTYPFNDLVKIFFKYGEDKFS 186
Query: 285 HLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELK 344
+ KI QAR + +T EL +LI++ P +++G A ++FQA+RI VNDEL
Sbjct: 187 KQIARKIEQARAIKPIETTTELAELIKAAKPAKELKKKGH--PAKQIFQAIRIEVNDELG 244
Query: 345 TLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDD 404
+ S+ + LA GR+ VI+FHSLEDR+ KQ F +E + + + +
Sbjct: 245 AADESIQDAMELLALDGRISVITFHSLEDRLTKQLF-------KEASTVDVPKGLPFIPE 297
Query: 405 NINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++ T+ ++++++PI PS EE N R SAKLRV +KI
Sbjct: 298 DMKPTF----------ELVSRKPILPSQEELAANNRAHSAKLRVAKKI 335
>gi|256003312|ref|ZP_05428303.1| S-adenosyl-methyltransferase MraW [Clostridium thermocellum DSM
2360]
gi|281417697|ref|ZP_06248717.1| S-adenosyl-methyltransferase MraW [Clostridium thermocellum JW20]
gi|385778587|ref|YP_005687752.1| S-adenosyl-methyltransferase MraW [Clostridium thermocellum DSM
1313]
gi|419723585|ref|ZP_14250700.1| S-adenosyl-methyltransferase MraW [Clostridium thermocellum AD2]
gi|419724590|ref|ZP_14251652.1| S-adenosyl-methyltransferase MraW [Clostridium thermocellum YS]
gi|255992602|gb|EEU02693.1| S-adenosyl-methyltransferase MraW [Clostridium thermocellum DSM
2360]
gi|281409099|gb|EFB39357.1| S-adenosyl-methyltransferase MraW [Clostridium thermocellum JW20]
gi|316940267|gb|ADU74301.1| S-adenosyl-methyltransferase MraW [Clostridium thermocellum DSM
1313]
gi|380772137|gb|EIC05995.1| S-adenosyl-methyltransferase MraW [Clostridium thermocellum YS]
gi|380780267|gb|EIC09950.1| S-adenosyl-methyltransferase MraW [Clostridium thermocellum AD2]
Length = 313
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 124/343 (36%), Positives = 178/343 (51%), Gaps = 40/343 (11%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H PV+L E + + + ++D T+G AGHS I++ E IG+D D A+ ++
Sbjct: 5 HKPVLLEETISNLAI-KPDGVYIDGTVGGAGHSGEILKRLDESGTLIGLDQDEFAIKTSQ 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L Q + K NF +IK V + NI VD IL+DLG+SS Q++
Sbjct: 64 EKL-----AQINSKAKIILVNTNFVNIKEVCQK--NNI--ESVDGILLDLGVSSHQLDEA 114
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
RGFS D PLDMRMD + L A+ I+N + E+ R++R+YGEE + IV+AR
Sbjct: 115 SRGFSYNKDAPLDMRMDRRGELTAKKIVNEYGREEIKRIIRDYGEEKWASRIAEFIVEAR 174
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +TGELVD+I++ P R+G A R FQALRIAVN+EL L ++ +
Sbjct: 175 KKKEIETTGELVDIIKAAIPS--SARRGGPHPAKRTFQALRIAVNNELGILAKTIEDGTE 232
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L PGGR +I+FHSLEDRIVK F + +N +
Sbjct: 233 LLKPGGRFCIITFHSLEDRIVKDEF----------------------NKKVNPCICPKQF 270
Query: 416 ------QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ G ++ ++PI P +E N R RSAKLRV++KI
Sbjct: 271 PVCTCGRKPEGVLVNRKPIVPKEKELEENPRARSAKLRVLEKI 313
>gi|317495032|ref|ZP_07953404.1| MraW methylase [Gemella morbillorum M424]
gi|316914804|gb|EFV36278.1| MraW methylase [Gemella morbillorum M424]
Length = 312
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 121/322 (37%), Positives = 164/322 (50%), Gaps = 46/322 (14%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
+VDCTLG AGHS I++ + KL+ D D AL A+ L +A
Sbjct: 24 YVDCTLGGAGHSLEILKQLTDGKLY-AFDQDSVALENAKDKLKD--------------YA 68
Query: 197 KNFRHIKSVLGQIDENILRSGV---DAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDP 253
IKS + E +L GV D +L DLG+SS Q++ PERGFS D LDMRMD
Sbjct: 69 DKVVFIKSNFKNLREKLLEHGVTEVDGVLYDLGVSSPQLDTPERGFSYNYDTRLDMRMDT 128
Query: 254 QASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSV 313
A + A +I+N + E+ ++ YGEE + + + RL + +T ELVD+I+
Sbjct: 129 DAKISAYEIVNEYDYNELVKIFYRYGEEKFSKQIARNVEKKRLEKPIETTFELVDIIKES 188
Query: 314 TPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLED 373
P + R G A RVFQA+RIAVN+EL E SL D + GR+ VI+FHSLED
Sbjct: 189 IPAAKRRTGGH--PAKRVFQAIRIAVNNELSVFEDSLEQAIDIVKKDGRISVITFHSLED 246
Query: 374 RIVKQTFLSIIDHNREDAEGN-----EEELRNIRDDNINETWIRQIIQGWNGKILTKRPI 428
RI KQ F S R++ N EE L + KI+T++PI
Sbjct: 247 RICKQIFNSY--AKRKEIPKNLPILPEESLAKL-------------------KIITRKPI 285
Query: 429 TPSAEEERLNCRCRSAKLRVIQ 450
P+ +E N R RSAKLR+ +
Sbjct: 286 YPTDKELEENNRSRSAKLRIAE 307
>gi|169334628|ref|ZP_02861821.1| hypothetical protein ANASTE_01031 [Anaerofustis stercorihominis DSM
17244]
gi|169259345|gb|EDS73311.1| S-adenosyl-methyltransferase MraW [Anaerofustis stercorihominis DSM
17244]
Length = 308
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 122/342 (35%), Positives = 178/342 (52%), Gaps = 41/342 (11%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+ E +D+ + +VD T+G AGHS I + E + IG+D D +A+
Sbjct: 3 HISVLYQETIDMLNIKED-GIYVDGTMGGAGHSLGICKKLSEEGIFIGIDQDDFVFDRAK 61
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L S K NF IK +L +D I +D ++ DLG+SS Q+++
Sbjct: 62 VRLES-------TDCKKEFVKGNFHDIKEIL--MDLGI--DKIDGMMADLGVSSFQIDDE 110
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
RGFS DGPLDMRMD S A++++N++ ++ RV+ EYGEE + I++ R
Sbjct: 111 TRGFSFKKDGPLDMRMDKSKSFSAKELVNTYSYEDLRRVISEYGEEQFAGNIAKHILKNR 170
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +T ELV++I++ P + A + FQA+RI VNDE+ L+ S+ D
Sbjct: 171 EEKPIETTYELVEIIKNAIP---KKFHQMKHPAKKTFQAIRIEVNDEIDALKQSVEDMID 227
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L GGRL VI+FHSLEDRIVK+ F E A+G T ++
Sbjct: 228 VLDKGGRLAVITFHSLEDRIVKKVF-------SEYAKGC--------------TCPKEFP 266
Query: 416 QGWNG-----KILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
G K+LT++P+ P+ EE N R RSAKLRVI+K+
Sbjct: 267 VCVCGNTPKVKVLTRKPLLPTEEEIEANPRSRSAKLRVIEKL 308
>gi|383751499|ref|YP_005426600.1| 16S rRNA m(4)C1402 methyltransferase [Rickettsia slovaca str.
D-CWPP]
gi|379774513|gb|AFD19869.1| 16S rRNA m(4)C1402 methyltransferase [Rickettsia slovaca str.
D-CWPP]
Length = 307
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 125/341 (36%), Positives = 188/341 (55%), Gaps = 42/341 (12%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHI-GVDVDPSALAK 173
SH+ VML E+L+ S + S++DCT GA G+S AI+ + ++ +D DP+ + +
Sbjct: 4 SHVSVMLNEMLEALSP-KAGESYLDCTFGAGGYSKAILES---CNCYVTALDRDPNVIKR 59
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
A + +G+ ++T+ FA +F +K D I++DLG+SSMQ++
Sbjct: 60 AEEIQQN--YGERFDFVETN-FADSFAKLKE-----------KKFDGIVLDLGVSSMQLD 105
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
+RGFS L DGPLDMRM Q L AE+ +N+ + E+ V+ +YG+ES + +IV+
Sbjct: 106 IADRGFSFLHDGPLDMRMSGQG-LSAEEFVNAAEEKELADVIYKYGDESFSRRIAKRIVE 164
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
R + ST +L ++++S G R+G I AT+ FQA+RI VNDEL LE L
Sbjct: 165 YRKTARIDSTSKLAEIVRSSI----GFRKGKIDPATKTFQAIRIYVNDELGELEQFLVNV 220
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE--TWI 411
+ L GRL V+SFHSLEDRIVK F +E++E + +DD + W+
Sbjct: 221 KNILKKDGRLVVVSFHSLEDRIVKNFF-------KENSEKPVVRSKYAKDDMTIDPNKWL 273
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
KI+T + + PS +E LN R RSAKLR + I
Sbjct: 274 ---------KIITNKALAPSDKEVGLNIRARSAKLRAAKAI 305
>gi|424780518|ref|ZP_18207391.1| rRNA small subunit methyltransferase H [Catellicoccus marimammalium
M35/04/3]
gi|422842920|gb|EKU27367.1| rRNA small subunit methyltransferase H [Catellicoccus marimammalium
M35/04/3]
Length = 320
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 126/341 (36%), Positives = 178/341 (52%), Gaps = 27/341 (7%)
Query: 112 QQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
Q H+ V+L E +D + + +VDCTLG GHS ++ + D D +A+
Sbjct: 3 QMFHHVTVLLKETVDYLNVKKD-GVYVDCTLGGGGHSEYLLSQLDQAGHLYCFDQDETAI 61
Query: 172 AKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQ 231
A+ L + + T A NFR ++ L + + VD IL DLG+SS Q
Sbjct: 62 ENAKIRLAEYVEK----GMVTFIHA-NFRELQKQLAALG----VTEVDGILYDLGVSSPQ 112
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ ERGFS D PLDMRM+ Q +L A +++N + ++ R+ + YGEE + KI
Sbjct: 113 LDEAERGFSYHQDAPLDMRMNRQQALSAYEVVNEYSFQDLVRIFQRYGEEKFAKNIARKI 172
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
AR + + +TGELV+ I+ P R+ G A RVFQA+RI VNDEL ESSL
Sbjct: 173 EMAREKAPIQTTGELVECIKEGIPAPARRKGGH--PAKRVFQAIRIEVNDELGAEESSLE 230
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
L GGR+ VI+FHSLEDRI K F + + + G L I ++ E
Sbjct: 231 QALQLLKVGGRVSVITFHSLEDRIAKTLFKEYSEPHADLPPG----LPIIPEEYQPEF-- 284
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
K++T++PI PS EE N R RSAKLRVI++I
Sbjct: 285 ---------KLITRKPILPSDEELEENNRARSAKLRVIERI 316
>gi|46908277|ref|YP_014666.1| S-adenosyl-methyltransferase MraW [Listeria monocytogenes serotype
4b str. F2365]
gi|254826203|ref|ZP_05231204.1| S-adenosyl-methyltransferase MraW [Listeria monocytogenes FSL
J1-194]
gi|255520499|ref|ZP_05387736.1| S-adenosyl-methyltransferase MraW [Listeria monocytogenes FSL
J1-175]
gi|405753269|ref|YP_006676734.1| S-adenosyl-methyltransferase [Listeria monocytogenes SLCC2378]
gi|424714919|ref|YP_007015634.1| Ribosomal RNA small subunit methyltransferase H [Listeria
monocytogenes serotype 4b str. LL195]
gi|51316263|sp|Q71XX2.1|RSMH_LISMF RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|46881548|gb|AAT04843.1| S-adenosyl-methyltransferase MraW [Listeria monocytogenes serotype
4b str. F2365]
gi|293595444|gb|EFG03205.1| S-adenosyl-methyltransferase MraW [Listeria monocytogenes FSL
J1-194]
gi|404222469|emb|CBY73832.1| S-adenosyl-methyltransferase [Listeria monocytogenes SLCC2378]
gi|424014103|emb|CCO64643.1| Ribosomal RNA small subunit methyltransferase H [Listeria
monocytogenes serotype 4b str. LL195]
Length = 312
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 130/340 (38%), Positives = 176/340 (51%), Gaps = 36/340 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D+ + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 4 HETVLLHETVDMLEV-KPDGIYVDATLGGAGHSEYLLNKLNEKGHLFAFDQDQTAIDNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L + TF K NFR +K L + I VD IL DLG+SS Q++
Sbjct: 63 IKLAD--------YSDKVTFIKANFRDMKEALNE--RGI--EAVDGILYDLGVSSPQLDE 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS D LDMRMD + L A+ ++N W ++ R+ +YGEE + +I +
Sbjct: 111 RERGFSYHQDAALDMRMDQEQELTAKIVVNEWSYQDLIRIFFQYGEEKFSKQIAREIERR 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +TGELVD+I++ P R+ G R FQA+RIAVNDEL +E SL
Sbjct: 171 REVKPIETTGELVDIIKTAIPAPARRKGGH--PGKRTFQAIRIAVNDELGAVEDSLEKAL 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNINETWIR 412
L PGGR+ VI+FHSLEDRI KQ F +E +G + L I D+
Sbjct: 229 TLLKPGGRISVITFHSLEDRITKQLF-------QEATKGPDLPPGLPVIPDE-------- 273
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ K+ T++PI PS EE N R RSAKLRVI+KI
Sbjct: 274 ---YKPDFKLATRKPIVPSEEELEQNNRARSAKLRVIEKI 310
>gi|218532980|ref|YP_002423796.1| S-adenosyl-methyltransferase MraW [Methylobacterium extorquens CM4]
gi|263456414|sp|B7KU77.1|RSMH_METC4 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|218525283|gb|ACK85868.1| S-adenosyl-methyltransferase MraW [Methylobacterium extorquens CM4]
Length = 353
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 122/342 (35%), Positives = 176/342 (51%), Gaps = 38/342 (11%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
Q+ H+PV+L EVL S R + VD T GA G++ A++ A PE+++ I +D DP+A+
Sbjct: 19 QARHVPVLLAEVLAALSLDRPGLA-VDGTFGAGGYTRALLEAGPEVRV-IAIDRDPTAIR 76
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENIL---RSGVDAILMDLGMSS 229
+N+ F R ++ G++D I + D +++D+G+SS
Sbjct: 77 GGADLVNA--------------FGGRLRLVQGRFGELDTLIADQNEAQADWVVLDIGVSS 122
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
MQ++ +RGFS DGPLDMRM + A D++N + + +L +GEE +
Sbjct: 123 MQIDEAQRGFSFRQDGPLDMRMGGEGP-SAADLVNGEEETTLADILYHFGEERRSRAVAR 181
Query: 290 KIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESS 349
IV+AR R + +T +L DL+ V +R I ATR FQ LRIAVNDEL L
Sbjct: 182 AIVEARRRAPIVTTAQLADLVAGV---VRPEPGSPIHPATRSFQGLRIAVNDELGELVRG 238
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINET 409
LHA L PGGRL V++FHSLEDRIVKQ F A + +
Sbjct: 239 LHAAERVLKPGGRLAVVTFHSLEDRIVKQFF---------SARSGRAAQASRHVPGVERP 289
Query: 410 WIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ K++TK P+ PS E +N R RSAKLR ++
Sbjct: 290 APKSF------KLVTKGPVLPSEAETDVNPRSRSAKLRAGER 325
>gi|261367518|ref|ZP_05980401.1| S-adenosyl-methyltransferase MraW [Subdoligranulum variabile DSM
15176]
gi|282570299|gb|EFB75834.1| S-adenosyl-methyltransferase MraW [Subdoligranulum variabile DSM
15176]
Length = 307
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 132/338 (39%), Positives = 172/338 (50%), Gaps = 34/338 (10%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
SHIPV+L LD + T ++D T G AGHS I + +L I +D DP A+A A
Sbjct: 4 SHIPVLLQPCLDGLAIDPT-GIYLDGTAGGAGHSMQIAKRLTTGRL-ISLDQDPDAVAVA 61
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L L NFR VL ++ V+ L+DLG+SS Q+++
Sbjct: 62 TERLKGL---------PAQVVQANFRDAARVLAELSI----PAVNGALLDLGVSSHQLDD 108
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
RGFS D PLDMRM Q A D++N+ E+ R+LR+YGEE + KIV
Sbjct: 109 AARGFSYHADAPLDMRMSQQGP-TAADLVNTLDREELTRILRDYGEEPYAWQIAGKIVAT 167
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +T +L DL+ S P R+ A R FQA+RIAVN EL L L A F
Sbjct: 168 RAEQPITTTLQLADLVASAVPPAERRKAK--NPARRTFQAIRIAVNSELDVLNEGLDAIF 225
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
+CLAPGGRL VI+FHSLEDR+VK F R A+ R E I
Sbjct: 226 NCLAPGGRLCVITFHSLEDRLVKNKF-------RRWAQ---------RCTCPPEQPICTC 269
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
K++T++PI AEE N R RSAKLRV++K+
Sbjct: 270 GGVPKAKLITRKPIEADAEELEHNRRARSAKLRVLEKV 307
>gi|257063602|ref|YP_003143274.1| S-adenosyl-methyltransferase MraW [Slackia heliotrinireducens DSM
20476]
gi|256791255|gb|ACV21925.1| S-adenosyl-methyltransferase MraW [Slackia heliotrinireducens DSM
20476]
Length = 318
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 132/343 (38%), Positives = 184/343 (53%), Gaps = 37/343 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H PV+L E L+ +T +FVD TLG AGHS + L IG+D D AL AR
Sbjct: 7 HTPVLLAECLEHLHL-QTQHTFVDSTLGGAGHSYEAAKLLGPDSLLIGIDQDQMALDAAR 65
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRS---GVDAILMDLGMSSMQV 232
L +L A P LK ++ G +D+ ++ + G+DAIL DLG+SS Q+
Sbjct: 66 KRLETL-GEDAAPKLKL---------LRGNFGNLDDLLVEACVPGIDAILFDLGVSSPQI 115
Query: 233 NNPERGFSVLGDGPLDMRMDP-QASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
+ RGFS D PLDMRMDP ++ A +++N+ + E+ R++ E +E + + I
Sbjct: 116 DFVSRGFSFKEDAPLDMRMDPGNQTINAAELINTLNEQELTRIIYENSDERWASRIASFI 175
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
V AR + ++G+LVD+I++ P RR G A R FQALRI VN EL L+S L
Sbjct: 176 VAARETAPIETSGQLVDIIKAAIPA-SARRAGG-HPAKRTFQALRIEVNSELTVLKSGLE 233
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
A L PGGR+ VIS+HSLEDRIVK F +H+R E +
Sbjct: 234 AAIRWLNPGGRVAVISYHSLEDRIVKNMF---AEHSRTCTCPPE---------------L 275
Query: 412 RQIIQGWNG--KILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ G K++T++PI P+ EE N R RSAKLRV +K+
Sbjct: 276 PVCVCGAKPVLKVITRKPILPTEEEIANNPRARSAKLRVAEKL 318
>gi|422416570|ref|ZP_16493527.1| S-adenosyl-methyltransferase MraW [Listeria innocua FSL J1-023]
gi|313622989|gb|EFR93285.1| S-adenosyl-methyltransferase MraW [Listeria innocua FSL J1-023]
Length = 312
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 129/340 (37%), Positives = 176/340 (51%), Gaps = 36/340 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D+ + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 4 HETVLLHETVDMLEV-KPDGIYVDATLGGAGHSEYLLNKLNEKGHLFAFDQDQTAIDNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L + TF K NFR++K L + I VD IL DLG+SS Q++
Sbjct: 63 IKLAE--------YSDKVTFIKSNFRYMKETLNE--RGI--EAVDGILYDLGVSSPQLDE 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS D LDMRMD + L A+ ++N W ++ R+ +YGEE + +I +
Sbjct: 111 RERGFSYHQDAALDMRMDQEQELTAKKVVNEWSYQDLIRIFFQYGEEKFSKQIAREIERR 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +TGELVD+I++ P R+ G R FQA+RIAVNDEL +E SL
Sbjct: 171 REVKPIETTGELVDIIKTAIPAPARRKGGH--PGKRTFQAIRIAVNDELGAVEDSLENAL 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNINETWIR 412
L PGGR+ VI+FHSLEDRI K F +E +G + L I D+
Sbjct: 229 TLLKPGGRISVITFHSLEDRITKHLF-------QEATKGPDLPPGLPVIPDE-------- 273
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ K+ T++PI PS EE N R RSAKLRVI+KI
Sbjct: 274 ---YKPDFKLATRKPIVPSEEELEQNNRARSAKLRVIEKI 310
>gi|289435382|ref|YP_003465254.1| S-adenosyl-methyltransferase [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289171626|emb|CBH28172.1| S-adenosyl-methyltransferase [Listeria seeligeri serovar 1/2b str.
SLCC3954]
Length = 312
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 129/340 (37%), Positives = 178/340 (52%), Gaps = 36/340 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D+ + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 4 HETVLLHETVDMLEV-KPDGIYVDATLGGAGHSEYLLNKLNEKGHLFAFDQDQTAIDNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L + + TF K NFR++K L + I S VD IL DLG+SS Q++
Sbjct: 63 IKLAA--------YSDKVTFVKSNFRYMKEALNE--RGI--SEVDGILYDLGVSSPQLDE 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS D LDMRMD + L A+ ++N W ++ R+ +YGEE + +I +
Sbjct: 111 RERGFSYHQDAALDMRMDREQELTAKIVVNEWSYQDLIRIFFQYGEEKFSKQIAREIERR 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +TGELVD+I++ P R+ G R FQA+RIAVNDEL +E SL
Sbjct: 171 REVKPIETTGELVDIIKTAIPAPARRKGGH--PGKRTFQAIRIAVNDELGAVEDSLEKAL 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNINETWIR 412
+ PGGR+ VI+FHSLEDRI K F +E +G + L I D+
Sbjct: 229 SLIKPGGRISVITFHSLEDRITKHLF-------QEATKGPDLPPGLPVIPDE-------- 273
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ K+ T++PI PS EE N R RSAKLRVI+KI
Sbjct: 274 ---YKPDFKLATRKPIVPSEEELEQNNRARSAKLRVIEKI 310
>gi|418033341|ref|ZP_12671818.1| S-adenosyl-methyltransferase MraW [Bacillus subtilis subsp.
subtilis str. SC-8]
gi|351469489|gb|EHA29665.1| S-adenosyl-methyltransferase MraW [Bacillus subtilis subsp.
subtilis str. SC-8]
Length = 273
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 120/302 (39%), Positives = 162/302 (53%), Gaps = 53/302 (17%)
Query: 162 IGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAI 221
I D D +AL A+ L+ GQ NFR++K L + + + + VD I
Sbjct: 11 IAFDQDDTALQHAKEVLSDY-KGQ------LILIKSNFRYLKEYLNE--QGV--TEVDGI 59
Query: 222 LMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEE 281
L DLG+SS Q++ PERGFS D PLDMRMD A+L A++++N W ++ R+ +YGEE
Sbjct: 60 LFDLGVSSPQLDTPERGFSYHHDAPLDMRMDQSATLSAKEVVNEWRYEDLVRIFFKYGEE 119
Query: 282 SNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVND 341
+ KI +AR++ + +TG+LVDLI+ P RR G A RVFQA+RIAVND
Sbjct: 120 KFSKQIARKIEEARMKSPIQTTGQLVDLIKDAIPAP-ARRSGG-HPAKRVFQAIRIAVND 177
Query: 342 ELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTF------------LSIIDHNRE 389
EL+ E +L + L PGGR+ VI+FHSLEDRI K TF L +I
Sbjct: 178 ELRVFEEALEQAIEVLKPGGRVSVITFHSLEDRICKTTFKEKSSLPELPPGLPVI----- 232
Query: 390 DAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVI 449
E E EL K++T++PIT S EE N R RSAKLR+
Sbjct: 233 -PEEFEPEL----------------------KLITRKPITASQEELEENNRARSAKLRIA 269
Query: 450 QK 451
+K
Sbjct: 270 EK 271
>gi|17230846|ref|NP_487394.1| S-adenosyl-methyltransferase MraW [Nostoc sp. PCC 7120]
gi|20138995|sp|Q8YRT9.1|RSMH_ANASP RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|17132449|dbj|BAB75053.1| all3354 [Nostoc sp. PCC 7120]
Length = 302
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 125/343 (36%), Positives = 170/343 (49%), Gaps = 57/343 (16%)
Query: 109 IQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDP 168
I++ SH+PV+ EV+ R ++D T+G GHS I+ A P++KL VD D
Sbjct: 8 IEEPIFSHLPVLPQEVITGLVV-RPGGRYLDVTVGGGGHSRLILEAAPDVKL-TAVDQDG 65
Query: 169 SALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMS 228
AL A+ L F + + ++S D + D +L DLG+S
Sbjct: 66 DALTAAKQELAE--------------FGEQVKFVRSNFAAYD--FPSTSFDGVLADLGVS 109
Query: 229 SMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQ 288
S ++ PERGFS LDMRMD + SL A D++N W + E+ + +YGEE +
Sbjct: 110 SYHLDTPERGFSFRHQASLDMRMDQRQSLSAADVINDWDEVELANIFFKYGEERLSRRIA 169
Query: 289 NKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLES 348
+IV+ R H+T EL + I S P R G I ATRVFQALRI VNDELK+LE+
Sbjct: 170 RRIVEKR---PFHTTTELAEAIASSVPPKY--RYGRIHPATRVFQALRIVVNDELKSLET 224
Query: 349 SLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE 408
+ L PGGR+ +ISFHSLEDR+VK LRN
Sbjct: 225 FIEKAPKALVPGGRIAIISFHSLEDRLVKHG------------------LRN-------- 258
Query: 409 TWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K+LTK+PI + +E N R RSAKLR+ +K
Sbjct: 259 --------SPLLKVLTKKPIIATDDEIANNPRSRSAKLRIAEK 293
>gi|227550453|ref|ZP_03980502.1| S-adenosyl-methyltransferase [Enterococcus faecium TX1330]
gi|257897144|ref|ZP_05676797.1| methyltransferase [Enterococcus faecium Com12]
gi|293377368|ref|ZP_06623572.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium PC4.1]
gi|424763043|ref|ZP_18190522.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium TX1337RF]
gi|227180354|gb|EEI61326.1| S-adenosyl-methyltransferase [Enterococcus faecium TX1330]
gi|257833709|gb|EEV60130.1| methyltransferase [Enterococcus faecium Com12]
gi|292644060|gb|EFF62166.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium PC4.1]
gi|402423510|gb|EJV55723.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium TX1337RF]
Length = 319
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 130/340 (38%), Positives = 178/340 (52%), Gaps = 35/340 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHI-GVDVDPSALAKA 174
H VML E +D + ++ +VDCTLG AGHS ++ + K H+ D D A+ A
Sbjct: 7 HYTVMLKETVDGLNI-KSDGVYVDCTLGGAGHSEYLL-SQLSSKGHLYAFDQDQKAIDHA 64
Query: 175 RAHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
+ L S + G TF K NFR ++ L + + VD IL DLG+SS Q+
Sbjct: 65 KLRLASYVEQGMV-------TFIKANFRELEERLSEYVDK-----VDGILYDLGVSSPQL 112
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ ERGFS D PLDMRMD A L A ++N + E+ ++ YGEE + +I
Sbjct: 113 DEAERGFSYHQDAPLDMRMDQSAPLTAYHVINEYSYHELVKIFFRYGEEKFSKQIAREIE 172
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
+ R + +TGELV++I+ V P R+ G A R+FQA+RIAVNDEL E+SL
Sbjct: 173 RVRKTKPIQTTGELVEIIKQVIPAPARRKGGH--PAKRIFQAVRIAVNDELGAEETSLEQ 230
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
L GR+ VI+FHSLEDRIVK F +E ++D I
Sbjct: 231 AIRLLKVNGRISVITFHSLEDRIVKSMF---------------KEYSTVQDLPPGLPVIP 275
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
Q K++T++PI PS EE N R RSAKLR+ +KI
Sbjct: 276 DEFQP-ELKVITRKPILPSEEELAENNRSRSAKLRIAEKI 314
>gi|257056486|ref|YP_003134318.1| S-adenosyl-methyltransferase MraW [Saccharomonospora viridis DSM
43017]
gi|256586358|gb|ACU97491.1| S-adenosyl-methyltransferase MraW [Saccharomonospora viridis DSM
43017]
Length = 327
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 125/339 (36%), Positives = 178/339 (52%), Gaps = 33/339 (9%)
Query: 115 SHIPVMLGEVLDVF--SSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
+H+PV++ VL++F + S VD TLG GH+ A++ A+P L++ IG+D DP AL
Sbjct: 15 THLPVLVDRVLELFEPAVSDRDAILVDTTLGLGGHTEALLSAYPRLRV-IGLDRDPEALE 73
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
++R L +G + HT + I+ VL ++D V+ +LMDLG+SSMQ+
Sbjct: 74 RSRRRLAR--YGSRVQFV--HTV---YDRIRDVLAELDV----PAVEGVLMDLGVSSMQL 122
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ +RGF+ + PLDMRMDP + A D+LN++ E+ RVLR+YGEE + +V
Sbjct: 123 DRDDRGFAYARNAPLDMRMDPTTGITAADVLNTYSVDELTRVLRDYGEERFARRIAKAVV 182
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
R R ++ LV L+ + P G R+ A R FQALRI VN EL L +++ A
Sbjct: 183 AERKREPFDTSERLVRLLYATVPA--GSRRTGGHPAKRTFQALRIEVNGELDILRAAVPA 240
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
D LA GGR+ V S+HSLEDRIVKQ EG EL
Sbjct: 241 AIDSLAVGGRIVVESYHSLEDRIVKQALTRAA--TSRTPEGLPVELPG------------ 286
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
G ++LT+ EE R N R S +LR +K
Sbjct: 287 ---HGPKLRLLTRGAEKADEEEIRRNPRAASVRLRAAEK 322
>gi|399924628|ref|ZP_10781986.1| 16S rRNA m(4)C1402 methyltransferase [Peptoniphilus rhinitidis
1-13]
Length = 312
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 122/353 (34%), Positives = 185/353 (52%), Gaps = 46/353 (13%)
Query: 102 DYDYESIIQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLH 161
D++++S++ ++ + V G++ ++D TLG AGHS I++ L
Sbjct: 2 DFEHKSVLLEETIEELNVREGKI------------YIDGTLGGAGHSFEILKKLKGTGLL 49
Query: 162 IGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAI 221
IG+D D AL A++ L+ + F N+ + L ++ VD I
Sbjct: 50 IGIDQDKEALDAAKSKLSQFEN--------VKFFNLNYVDFEKALDELG----IEKVDGI 97
Query: 222 LMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEE 281
L+D+G+SS Q +NP+RGFS D PLDMRMD + A DI+N++ ++E+ +++++YGEE
Sbjct: 98 LLDIGVSSYQFDNPQRGFSYRFDAPLDMRMDQNLDISARDIVNTYSESEITKIIKDYGEE 157
Query: 282 SNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVND 341
+ IV+ R + +T ELV++I+ P + RR G A R FQALRI VN
Sbjct: 158 KWASRIAKFIVEDRKVKDIDTTFELVEIIKKAIP-IGARRNGH-HPAKRTFQALRIEVNK 215
Query: 342 ELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNI 401
EL LE+S+ L PGGR+ +I+FHSLEDRIVK +F + +
Sbjct: 216 ELDVLENSIEKFVKKLNPGGRIAIITFHSLEDRIVKNSF------------------KYL 257
Query: 402 RDDNI--NETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
D I + I + KI+T++PIT S E N R SAKLRV +KI
Sbjct: 258 EKDCICPPSSPICTCDKKREIKIITRKPITASDRELCENNRSHSAKLRVAEKI 310
>gi|336119773|ref|YP_004574550.1| S-adenosyl-L-methionine-dependent [Microlunatus phosphovorus NM-1]
gi|334687562|dbj|BAK37147.1| S-adenosyl-L-methionine-dependent [Microlunatus phosphovorus NM-1]
Length = 337
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 111/277 (40%), Positives = 157/277 (56%), Gaps = 27/277 (9%)
Query: 116 HIPVMLGEVLDVFS-----------SSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGV 164
H PVML E++ V + S+ T VDCTLG GH+ A++RA PEL L IG+
Sbjct: 10 HEPVMLDEIVAVLAPALTAPLADDASNSTRPVLVDCTLGLGGHAEALLRACPELHL-IGL 68
Query: 165 DVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKN-FRHIKSVLGQIDENILRSGVDAILM 223
D DP+ALA A L P+ TF + + + VL ++ R V IL+
Sbjct: 69 DRDPNALALATRRLA--------PYADRTTFVEAVYDELTDVLAELG----RPRVQGILL 116
Query: 224 DLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESN 283
DLG+SS+Q+++ +RGF+ D PLDMRMD Q L A +++N++ +E+ R+LR YGEE
Sbjct: 117 DLGLSSLQIDDTDRGFAYAVDAPLDMRMDGQQELTAAEVVNTYSASELARILRTYGEERF 176
Query: 284 WHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDEL 343
+ ++V AR ++ LV ++++ P R+ G A R FQALRI VN EL
Sbjct: 177 ADRIARRVVAARAEQPFDTSARLVGVLEAAIPAA-ARKTGG-HPAKRTFQALRIEVNREL 234
Query: 344 KTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTF 380
LES L LA GGR+ V+++HSLEDR+VKQ
Sbjct: 235 AALESVLPQAVAALAVGGRIAVLAYHSLEDRLVKQVL 271
>gi|75909403|ref|YP_323699.1| S-adenosyl-methyltransferase MraW [Anabaena variabilis ATCC 29413]
gi|123608960|sp|Q3M882.1|RSMH_ANAVT RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|75703128|gb|ABA22804.1| methyltransferase [Anabaena variabilis ATCC 29413]
Length = 305
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 122/343 (35%), Positives = 172/343 (50%), Gaps = 57/343 (16%)
Query: 109 IQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDP 168
+++ SH+PV+ EV+ + R+ ++D T+G GHS I+ A P+++L VD D
Sbjct: 11 VEEATFSHLPVLPQEVVTGLAV-RSGGHYLDATVGGGGHSRLILEAAPDVRL-TAVDQDG 68
Query: 169 SALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMS 228
AL A+ L F + + ++S + + + D +L DLG+S
Sbjct: 69 DALTAAKKELAE--------------FGEQVKFVRSNFAAYEFPV--ASFDGVLADLGVS 112
Query: 229 SMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQ 288
S ++ PERGFS LDMRMD + SL A D++N W + E+ + +YGEE +
Sbjct: 113 SYHLDTPERGFSFRHQANLDMRMDQRQSLSAADVINDWDEVELANIFFKYGEERLSRRIA 172
Query: 289 NKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLES 348
+IV+ R H+T EL + I S P R I ATRVFQALRI VNDELK+LE+
Sbjct: 173 RRIVEKR---PFHTTTELAEAIASSVPPKY--RYARIHPATRVFQALRIVVNDELKSLET 227
Query: 349 SLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE 408
L L PGGR+ +ISFHSLEDR+VK LRN
Sbjct: 228 FLEKAPKALVPGGRIAIISFHSLEDRLVKHG------------------LRN-------- 261
Query: 409 TWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ K+LTK+PI + E N R RSAKLR+ +K
Sbjct: 262 --------SPSLKVLTKKPIIATEAEIANNPRSRSAKLRIAEK 296
>gi|384431262|ref|YP_005640622.1| Ribosomal RNA small subunit methyltransferase H [Thermus
thermophilus SG0.5JP17-16]
gi|333966730|gb|AEG33495.1| Ribosomal RNA small subunit methyltransferase H [Thermus
thermophilus SG0.5JP17-16]
Length = 282
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 127/338 (37%), Positives = 178/338 (52%), Gaps = 61/338 (18%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
+H+PV+ E LD+ + R +VD TLG AGH+ I+ + IG+D DP A+A+A
Sbjct: 2 THVPVLYREALDLLAV-RPGGVYVDATLGGAGHARGILERGGRV---IGLDQDPEAVARA 57
Query: 175 RA-HLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
+ HL L Q NFRH+K L + + R VD IL DLG+SS ++
Sbjct: 58 KGLHLPDLTVVQG-----------NFRHLKRHLAAL--GVER--VDGILADLGVSSFHLD 102
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
+P RGFS +GPLDMRM + A++++N P + R+LRE GEE + + IV
Sbjct: 103 DPSRGFSYQKEGPLDMRMGLEGP-TAKEVVNRLPLEALARLLRELGEEPQAYRIARAIVA 161
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + + +T +L ++++ G R R G A + FQALRI VNDEL L+ L
Sbjct: 162 AREKAPIETTTQLAEIVRKAV-GFR--RAGH--PARKTFQALRIYVNDELNALKEFLEQA 216
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
+ LAPGGRL VI+FHSLEDR+VK R +R+ +
Sbjct: 217 AEVLAPGGRLVVIAFHSLEDRVVK---------------------RFLRESGL------- 248
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K+LTK+P+ PS +E N R RSAKLR +K
Sbjct: 249 -------KVLTKKPLVPSEKEAAQNPRARSAKLRAAEK 279
>gi|227535245|ref|ZP_03965294.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Lactobacillus paracasei subsp. paracasei ATCC 25302]
gi|227187129|gb|EEI67196.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Lactobacillus paracasei subsp. paracasei ATCC 25302]
Length = 313
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 122/317 (38%), Positives = 172/317 (54%), Gaps = 30/317 (9%)
Query: 136 SFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTF 195
++VD TLG GH+ I+ +L I D D +A+A A +L H
Sbjct: 25 TYVDATLGRGGHTRQILNQLTTGRL-IAFDQDEAAIATVTADFGTLPKQLTLVH------ 77
Query: 196 AKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQA 255
+NFR + L + + VD IL DLG+SS Q ++ +RGFS D PLDMRMD +
Sbjct: 78 -RNFRDLTDALTTLG----ITEVDGILYDLGVSSPQFDDSKRGFSYRFDAPLDMRMDQRQ 132
Query: 256 SLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTP 315
+L A+ I+N WP A++ R+ YGEE + +I QAR + +T +LV+LI++ P
Sbjct: 133 TLDAKTIVNEWPYADLVRIFSRYGEEHFSKQIARRIEQARTVQPITTTFQLVELIKAGIP 192
Query: 316 GMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRI 375
+ RR G A +VFQA+RIAVNDEL LESSL + GGR+ VI+F SLEDR+
Sbjct: 193 A-KARRTGG-HPAKKVFQAIRIAVNDELSALESSLEQALKLINVGGRISVITFQSLEDRL 250
Query: 376 VKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEE 435
VK F +E+ +++D I Q N +++ ++PI PS EE
Sbjct: 251 VKTMF---------------KEVSSVQDVPRGLPVIPASAQP-NYRLVNRKPILPSEEEL 294
Query: 436 RLNCRCRSAKLRVIQKI 452
+N R SAKLRVI+KI
Sbjct: 295 TVNHRAHSAKLRVIEKI 311
>gi|16804080|ref|NP_465565.1| S-adenosyl-methyltransferase MraW [Listeria monocytogenes EGD-e]
gi|254827071|ref|ZP_05231758.1| S-adenosyl-methyltransferase MraW [Listeria monocytogenes FSL
N3-165]
gi|284802488|ref|YP_003414353.1| S-adenosyl-methyltransferase MraW [Listeria monocytogenes 08-5578]
gi|284995630|ref|YP_003417398.1| S-adenosyl-methyltransferase MraW [Listeria monocytogenes 08-5923]
gi|386051016|ref|YP_005969007.1| S-adenosyl-methyltransferase MraW [Listeria monocytogenes FSL
R2-561]
gi|386054295|ref|YP_005971853.1| methylase MraW [Listeria monocytogenes Finland 1998]
gi|404284538|ref|YP_006685435.1| S-adenosyl-methyltransferase [Listeria monocytogenes SLCC2372]
gi|405759092|ref|YP_006688368.1| S-adenosyl-methyltransferase [Listeria monocytogenes SLCC2479]
gi|20138988|sp|Q8Y5L7.1|RSMH_LISMO RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|16411511|emb|CAD00119.1| lmo2041 [Listeria monocytogenes EGD-e]
gi|258599454|gb|EEW12779.1| S-adenosyl-methyltransferase MraW [Listeria monocytogenes FSL
N3-165]
gi|284058050|gb|ADB68991.1| S-adenosyl-methyltransferase MraW [Listeria monocytogenes 08-5578]
gi|284061097|gb|ADB72036.1| S-adenosyl-methyltransferase MraW [Listeria monocytogenes 08-5923]
gi|346424862|gb|AEO26387.1| S-adenosyl-methyltransferase MraW [Listeria monocytogenes FSL
R2-561]
gi|346646946|gb|AEO39571.1| methylase MraW [Listeria monocytogenes Finland 1998]
gi|404234040|emb|CBY55443.1| S-adenosyl-methyltransferase [Listeria monocytogenes SLCC2372]
gi|404236974|emb|CBY58376.1| S-adenosyl-methyltransferase [Listeria monocytogenes SLCC2479]
gi|441471842|emb|CCQ21597.1| Ribosomal RNA small subunit methyltransferase H [Listeria
monocytogenes]
gi|441474978|emb|CCQ24732.1| Ribosomal RNA small subunit methyltransferase H [Listeria
monocytogenes N53-1]
Length = 312
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 129/340 (37%), Positives = 176/340 (51%), Gaps = 36/340 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D+ + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 4 HETVLLHETVDMLEV-KPDGIYVDATLGGAGHSEYLLNKLNEKGHLFAFDQDQTAIDNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L + TF K NFR +K L + I VD IL DLG+SS Q++
Sbjct: 63 IKLAD--------YSDKVTFIKANFRDMKEALNE--RGI--EAVDGILYDLGVSSPQLDE 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS D LDMRMD + L A+ ++N W ++ R+ +YGEE + +I +
Sbjct: 111 RERGFSYHQDAALDMRMDQEQELTAKTVVNEWSYQDLIRIFFQYGEEKFSKQIAREIERR 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +TGELVD+I++ P R+ G R FQA+RIAVNDEL +E SL
Sbjct: 171 REVKPIETTGELVDIIKTAIPAPARRKGGH--PGKRTFQAIRIAVNDELGAVEDSLEKAL 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNINETWIR 412
+ PGGR+ VI+FHSLEDRI KQ F +E +G + L I D+
Sbjct: 229 TLIKPGGRISVITFHSLEDRITKQLF-------QEATKGPDLPPGLPVIPDE-------- 273
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ K+ T++PI PS EE N R RSAKLRVI+KI
Sbjct: 274 ---YKPDFKLATRKPIVPSEEELEQNNRARSAKLRVIEKI 310
>gi|163782688|ref|ZP_02177685.1| hypothetical protein HG1285_17430 [Hydrogenivirga sp. 128-5-R1-1]
gi|159882261|gb|EDP75768.1| hypothetical protein HG1285_17430 [Hydrogenivirga sp. 128-5-R1-1]
Length = 289
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 126/340 (37%), Positives = 172/340 (50%), Gaps = 55/340 (16%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H PV+L E D+ + + ++DCTLG GH+ I+ +P+ IG+D D A+ A+
Sbjct: 2 HTPVLLEESTDLLLEN-SGELYLDCTLGLGGHTKRILEKNPQ-AFVIGIDRDEEAIEIAK 59
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGV---DAILMDLGMSSMQV 232
+L F K+ +DE + GV D IL+DLG+S Q+
Sbjct: 60 ENLKE--------------FEGRIAIYKADFADLDEVLRAEGVERVDGILLDLGVSMFQL 105
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ ERGFS D PLDMRMD L A ++N + + E+ R+L EYGEE + IV
Sbjct: 106 KS-ERGFSFQIDAPLDMRMDKDQKLTAYKVVNEYSEKELARILWEYGEERLSRKIARAIV 164
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
Q R + +T EL +L+ S+ P R G AT+ FQA+RI VN EL++L+++L
Sbjct: 165 QHRREKPIETTKELAELVSSLYPAR--MRHGRTHPATKTFQAIRIEVNRELESLKTALGK 222
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
D L P GRL VISFHSLEDRIVK F +R DA
Sbjct: 223 TPDLLNPKGRLVVISFHSLEDRIVKNFF-----RDRSDA--------------------- 256
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ILTK+PI PS EE +N RSAKLR ++I
Sbjct: 257 -------FRILTKKPIIPSQEEIAMNPASRSAKLRAGERI 289
>gi|398346387|ref|ZP_10531090.1| 16S rRNA m(4)C1402 methyltranserfase [Leptospira broomii str. 5399]
Length = 321
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 129/349 (36%), Positives = 176/349 (50%), Gaps = 64/349 (18%)
Query: 116 HIPVMLGEVL----DVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
H V+ E+L DVF+ + I F+D T G GHS ++ P+ K+ I +D D L
Sbjct: 10 HYSVLYREILSFFLDVFAPDQEIL-FLDGTAGEGGHSLLLLENFPQAKI-ILLDRDSVML 67
Query: 172 AKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILR-SGVD----AILMDLG 226
+A+A L H +TH NF ++DE LR +GVD IL+DLG
Sbjct: 68 TRAKARLERF-------HDRTHFIEANF-------SEVDEEFLREAGVDRRPDGILLDLG 113
Query: 227 MSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHL 286
+S+ + + RGFS + PLDMR+ + AED++N++P+ + ++ EYGEE
Sbjct: 114 ISTFHLLHAGRGFSFRENEPLDMRLSSSGGISAEDVINTYPEKTLSKIFYEYGEERWTKK 173
Query: 287 LQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWI---KTATRVFQALRIAVNDEL 343
+ +++ R G + TGEL LI V P R+ W ATRVFQALRI VN EL
Sbjct: 174 IVEAVLERRRHGRISYTGELAQLISRVIP-----RKFWPPGRHPATRVFQALRIEVNQEL 228
Query: 344 KTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRD 403
+E L + LA GGR VISFHSLEDRIVK F R+ A +E
Sbjct: 229 LHIEFGLSKLLEVLALGGRFQVISFHSLEDRIVKNKF-------RDYARSSE-------- 273
Query: 404 DNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
K++TK+P+ P EE R N RSAKLRVI K+
Sbjct: 274 ----------------AKVVTKKPVLPGEEEMRENNASRSAKLRVIDKL 306
>gi|284929250|ref|YP_003421772.1| S-adenosyl-methyltransferase MraW [cyanobacterium UCYN-A]
gi|284809694|gb|ADB95391.1| S-adenosyl-methyltransferase MraW [cyanobacterium UCYN-A]
Length = 298
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 122/336 (36%), Positives = 177/336 (52%), Gaps = 56/336 (16%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HIPV+ E+++ + + ++D TLG GHS+ I+ P +++ IG+D+D A+ +
Sbjct: 16 HIPVLSQELIEGLAI-KPGGIYLDATLGRGGHSNLILSTFPNVQV-IGIDLDDDAILNTK 73
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
+++S + + T+A NF K G+I+E D I+ DLG+SS Q++NP
Sbjct: 74 TNMSSSMKQ------RFQTWAGNF---KDYPGKIEE------FDGIIADLGVSSPQLDNP 118
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS + LDMRM+ + SL AE+I+N W + + + +YGEE + +V+ R
Sbjct: 119 ERGFSFRHEASLDMRMNREQSLTAEEIINHWSEITLANIFYQYGEEKRSRSIARYLVENR 178
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+T +L I V P R G I ATRVFQALRI VNDEL +LE L
Sbjct: 179 ---PFFTTTDLASAISKVFPP--KYRYGRIHPATRVFQALRIIVNDELTSLEKFLQQSPS 233
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L P G +G+ISFHSLEDRIVK TF RD ++ +
Sbjct: 234 WLKPQGNIGIISFHSLEDRIVKHTF---------------------RDSSLLD------- 265
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
++TK+PI P EE+ N R RSAKLR ++
Sbjct: 266 ------VITKKPIIPKQEEKYNNRRSRSAKLRFAKR 295
>gi|386044348|ref|YP_005963153.1| methylase MraW [Listeria monocytogenes 10403S]
gi|404411342|ref|YP_006696930.1| S-adenosyl-methyltransferase [Listeria monocytogenes SLCC5850]
gi|345537582|gb|AEO07022.1| methylase MraW [Listeria monocytogenes 10403S]
gi|404231168|emb|CBY52572.1| S-adenosyl-methyltransferase [Listeria monocytogenes SLCC5850]
Length = 312
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 129/340 (37%), Positives = 176/340 (51%), Gaps = 36/340 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D+ + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 4 HETVLLHETVDMLEV-KPDGIYVDATLGGAGHSEYLLNKLNEKGHLFAFDQDQTAIDNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L + TF K NFR +K L + I VD IL DLG+SS Q++
Sbjct: 63 IKLAD--------YSDKVTFIKANFRDMKEALNE--RGI--EAVDGILYDLGVSSPQLDE 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS D LDMRMD + L A+ ++N W ++ R+ +YGEE + +I +
Sbjct: 111 RERGFSYHQDAALDMRMDQEQELTAKTVVNEWSYQDLIRIFFQYGEEKFSKQIAREIERH 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +TGELVD+I++ P R+ G R FQA+RIAVNDEL +E SL
Sbjct: 171 REVKPIETTGELVDIIKTAIPAPARRKGGH--PGKRTFQAIRIAVNDELGAVEDSLEKAL 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNINETWIR 412
+ PGGR+ VI+FHSLEDRI KQ F +E +G + L I D+
Sbjct: 229 TLIKPGGRISVITFHSLEDRITKQLF-------QEATKGPDLPPGLPVIPDE-------- 273
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ K+ T++PI PS EE N R RSAKLRVI+KI
Sbjct: 274 ---YKPDFKLATRKPIVPSEEELEQNNRARSAKLRVIEKI 310
>gi|146295951|ref|YP_001179722.1| 16S rRNA m(4)C1402 methyltransferase [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|263446954|sp|A4XHZ6.1|RSMH_CALS8 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|145409527|gb|ABP66531.1| S-adenosyl-methyltransferase MraW [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 307
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 128/346 (36%), Positives = 175/346 (50%), Gaps = 51/346 (14%)
Query: 116 HIPVMLGEVLDVFSSSRTITS----FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
HIPV+L E S+S +T +VD T G GHS I+ + +D D A+
Sbjct: 4 HIPVLLEE-----STSYLVTKPDGIYVDATFGLGGHSKKILEKLSSNGFLVAIDKDEEAI 58
Query: 172 AKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDE--NILR-SGVDAILMDLGMS 228
+ N + + S ++DE N L+ +D IL DLG+S
Sbjct: 59 ELGKEKFKK---------------CNNIKIVHSPFSRLDEVLNFLKIDKIDGILFDLGVS 103
Query: 229 SMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQ 288
S+Q++ PERGFS D LDMRMD + L A D++N + + E+ R++REYGEE +
Sbjct: 104 SLQLDKPERGFSYNSDSFLDMRMDKTSKLTAYDVVNKYSEKELERIIREYGEERYAKKIA 163
Query: 289 NKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLES 348
+IV+ R + + +T EL DLI SV P R + A R FQA+RI VN EL+ ++
Sbjct: 164 KEIVKRREQKPITTTKELNDLINSVVP----RPKDGSNPAKRTFQAIRIEVNGELEEIKV 219
Query: 349 SLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE 408
+L L GGR+ VISFHSLEDRIVK+ F H+ E I
Sbjct: 220 ALEKSIRFLKSGGRICVISFHSLEDRIVKEFFKY---HSLE---------------CICP 261
Query: 409 TWIRQIIQGWNGK--ILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
I + G + ILTK+PITP+ EE N R SAKLRV +KI
Sbjct: 262 KDIPVCVCGKKKELNILTKKPITPTKEEIERNKRSHSAKLRVAEKI 307
>gi|312111775|ref|YP_003990091.1| S-adenosyl-methyltransferase MraW [Geobacillus sp. Y4.1MC1]
gi|336236158|ref|YP_004588774.1| ribosomal RNA small subunit methyltransferase H [Geobacillus
thermoglucosidasius C56-YS93]
gi|423720691|ref|ZP_17694873.1| ribosomal RNA small subunit methyltransferase H [Geobacillus
thermoglucosidans TNO-09.020]
gi|311216876|gb|ADP75480.1| S-adenosyl-methyltransferase MraW [Geobacillus sp. Y4.1MC1]
gi|335363013|gb|AEH48693.1| Ribosomal RNA small subunit methyltransferase H [Geobacillus
thermoglucosidasius C56-YS93]
gi|383366044|gb|EID43335.1| ribosomal RNA small subunit methyltransferase H [Geobacillus
thermoglucosidans TNO-09.020]
Length = 310
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 127/338 (37%), Positives = 175/338 (51%), Gaps = 32/338 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + T +VDCTLG GHS ++ E D D A+ A+
Sbjct: 4 HTTVLLKEAVDGLHINPDGT-YVDCTLGGGGHSEYLLSQLSEKGRLFAFDQDDMAIEYAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L + K TF + NFR + L + VD IL DLG+SS Q++
Sbjct: 63 KRLAR--------YEKQVTFIRRNFRFLAEELAARGVH----KVDGILFDLGVSSPQLDT 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
PERGFS D PLDMRM+ + L A DI+N WP ++ + YGEE + KI +
Sbjct: 111 PERGFSYHHDAPLDMRMNREQPLTAYDIVNHWPYEKLVHIFFHYGEEKFSKQVARKIEEV 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +TGELV++I+ P RR G A R+FQA+RIAVNDEL+ + ++
Sbjct: 171 RKEKRIETTGELVNIIKEAIPAP-ARRSGG-HPAKRIFQAIRIAVNDELQAFQEAITQAI 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
D L GGR+ VI+FHSLEDRI K TF + A + + + I E + +
Sbjct: 229 DVLKSGGRISVITFHSLEDRICKATF--------KKASQSPQLPPGL--PLIPEQYRPTL 278
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
K++TK+PI PS EE N R RSAKLR+ +K+
Sbjct: 279 ------KMITKKPIVPSEEEVAHNHRARSAKLRIAEKL 310
>gi|417983341|ref|ZP_12623979.1| rRNA small subunit methyltransferase H [Lactobacillus casei 21/1]
gi|417989527|ref|ZP_12630031.1| rRNA small subunit methyltransferase H [Lactobacillus casei A2-362]
gi|417992780|ref|ZP_12633132.1| rRNA small subunit methyltransferase H [Lactobacillus casei CRF28]
gi|417996130|ref|ZP_12636413.1| rRNA small subunit methyltransferase H [Lactobacillus casei M36]
gi|418001902|ref|ZP_12642030.1| rRNA small subunit methyltransferase H [Lactobacillus casei UCD174]
gi|418007870|ref|ZP_12647742.1| rRNA small subunit methyltransferase H [Lactobacillus casei UW4]
gi|418010726|ref|ZP_12650497.1| rRNA small subunit methyltransferase H [Lactobacillus casei Lc-10]
gi|418014859|ref|ZP_12654448.1| rRNA small subunit methyltransferase H [Lactobacillus casei Lpc-37]
gi|410528287|gb|EKQ03140.1| rRNA small subunit methyltransferase H [Lactobacillus casei 21/1]
gi|410532571|gb|EKQ07273.1| rRNA small subunit methyltransferase H [Lactobacillus casei CRF28]
gi|410535839|gb|EKQ10449.1| rRNA small subunit methyltransferase H [Lactobacillus casei M36]
gi|410537914|gb|EKQ12476.1| rRNA small subunit methyltransferase H [Lactobacillus casei A2-362]
gi|410545347|gb|EKQ19647.1| rRNA small subunit methyltransferase H [Lactobacillus casei UCD174]
gi|410547955|gb|EKQ22176.1| rRNA small subunit methyltransferase H [Lactobacillus casei UW4]
gi|410552681|gb|EKQ26696.1| rRNA small subunit methyltransferase H [Lactobacillus casei Lpc-37]
gi|410553305|gb|EKQ27308.1| rRNA small subunit methyltransferase H [Lactobacillus casei Lc-10]
Length = 313
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 122/317 (38%), Positives = 172/317 (54%), Gaps = 30/317 (9%)
Query: 136 SFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTF 195
++VD TLG GH+ I+ +L I D D +A+A A +L H
Sbjct: 25 TYVDATLGRGGHTRQILNQLTTGRL-IAFDQDEAAIATVTADFGTLPKQLTLVH------ 77
Query: 196 AKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQA 255
+NFR + L + + VD IL DLG+SS Q ++ +RGFS D PLDMRMD +
Sbjct: 78 -RNFRDLTDALTTLG----ITEVDGILYDLGVSSPQFDDSKRGFSYRFDAPLDMRMDQRQ 132
Query: 256 SLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTP 315
+L A+ I+N WP A++ R+ YGEE + +I QAR + +T +LV+LI++ P
Sbjct: 133 TLDAKTIVNEWPYADLVRIFSRYGEEHFSKQIARRIEQARTVQPITTTFQLVELIKAGIP 192
Query: 316 GMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRI 375
+ RR G A +VFQA+RIAVNDEL LESSL + GGR+ VI+F SLEDR+
Sbjct: 193 A-KARRTGG-HPAKKVFQAIRIAVNDELSALESSLEQALKLINVGGRISVITFQSLEDRL 250
Query: 376 VKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEE 435
VK F +E+ +++D I Q N +++ ++PI PS EE
Sbjct: 251 VKTMF---------------KEVSSVQDVPRGLPVIPASAQP-NYRLVNRKPILPSEEEL 294
Query: 436 RLNCRCRSAKLRVIQKI 452
+N R SAKLRVI+KI
Sbjct: 295 AVNHRAHSAKLRVIEKI 311
>gi|315283083|ref|ZP_07871351.1| S-adenosyl-methyltransferase MraW [Listeria marthii FSL S4-120]
gi|313613270|gb|EFR87146.1| S-adenosyl-methyltransferase MraW [Listeria marthii FSL S4-120]
Length = 312
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 130/340 (38%), Positives = 175/340 (51%), Gaps = 36/340 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D+ + +VD TLG AGHS ++ E D D +A+ A
Sbjct: 4 HETVLLHETVDMLEV-KPDGIYVDATLGGAGHSEYLLNKLNEKGHLFAFDQDQTAIDNAE 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L + TF K NFR +K L + I VD IL DLG+SS Q++
Sbjct: 63 IKLAD--------YSDKVTFIKANFRDMKEALNE--RGI--EAVDGILYDLGVSSPQLDE 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS D LDMRMD + L A+ I+N W ++ R+ +YGEE + +I +
Sbjct: 111 RERGFSYHQDAALDMRMDQEQELTAKTIVNEWSYQDLIRIFFQYGEEKFSKQIAREIERR 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +TGELVD+I++ P R+ G R FQA+RIAVNDEL +E SL
Sbjct: 171 REVKPIETTGELVDIIKTAIPAPARRKGGH--PGKRTFQAIRIAVNDELGAVEDSLEKAL 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNINETWIR 412
+ PGGR+ VI+FHSLEDRI KQ F +E +G + L I D+
Sbjct: 229 TLIKPGGRISVITFHSLEDRITKQLF-------QEATKGPDLPPGLPVIPDE-------- 273
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ K+ T++PI PS EE N R RSAKLRVI+KI
Sbjct: 274 ---YKPDFKLATRKPIVPSEEELEQNNRARSAKLRVIEKI 310
>gi|406927365|gb|EKD63406.1| S-adenosyl-methyltransferase MraW [uncultured bacterium]
Length = 316
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 116/343 (33%), Positives = 177/343 (51%), Gaps = 32/343 (9%)
Query: 109 IQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDP 168
+ + HIPV+ EVLD + + VD TLG GH+ I++A + + D
Sbjct: 5 FEHKNKVHIPVLKEEVLDAMNL-KAGDKVVDATLGLGGHAKEILKAIGKSGHLYAFEQDE 63
Query: 169 SALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMS 228
L A+ +L + H NF +K+ L ++ V+A+ DLG+S
Sbjct: 64 RNLKVAKENLKDFTDQVTYFHY-------NFASLKTCLSDANQ----PCVNAVFFDLGLS 112
Query: 229 SMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQ 288
S V++P RGFS GPLDMR D + L A +I+N W + ++ ++ +YGEE +
Sbjct: 113 SPHVDDPARGFSFRSVGPLDMRFDQRRKLTASEIVNKWSEDKLVQIFSKYGEERMSKTVA 172
Query: 289 NKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLES 348
+IV R +T +L D I+ + + ++ AT++FQALRIAVN+E+ L
Sbjct: 173 REIVSRRKDKPFETTVDLADFIKYIKRNLHEKKD----PATQIFQALRIAVNNEMVVLAD 228
Query: 349 SLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE 408
+L D + GGR+ IS+HSLEDRIVK F + R++ D NE
Sbjct: 229 ALVQAIDAVCAGGRVVAISYHSLEDRIVKNVFRDL--------------SRDLEDP--NE 272
Query: 409 TWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+I ++I+ +LTK+PI PSA+E N R RSAK+RV++K
Sbjct: 273 PFIHKVIREKQVSVLTKKPIEPSAKEVSENPRARSAKMRVVEK 315
>gi|156741091|ref|YP_001431220.1| S-adenosyl-methyltransferase MraW [Roseiflexus castenholzii DSM
13941]
gi|262826161|sp|A7NIA2.1|RSMH_ROSCS RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|156232419|gb|ABU57202.1| S-adenosyl-methyltransferase MraW [Roseiflexus castenholzii DSM
13941]
Length = 312
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 123/347 (35%), Positives = 188/347 (54%), Gaps = 51/347 (14%)
Query: 107 SIIQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRA-HPELKLHIGVD 165
S++ H PV+L E L ++D T+G GH++AI+ A P+ +L +G+D
Sbjct: 14 SVLSALDYHHTPVLLTETLAGLQPHPG-GWYIDGTVGGGGHAAAILEATAPDGRL-LGID 71
Query: 166 VDPSALAKARAHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMD 224
DP+ALA A A + P+ + T + +FR I G++ V +L+D
Sbjct: 72 CDPAALAAAAA--------RLAPYGERVTLVRGSFREI----GRLAHKAGFVQVQGVLLD 119
Query: 225 LGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNW 284
LG+SS Q++ PERGFS PLDMR+DP A + A +++N P+ ++ ++ Y EE
Sbjct: 120 LGVSSYQLDTPERGFSFQASAPLDMRLDPDAPMTAANLVNDLPERDLADLIFRYSEERGS 179
Query: 285 HLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELK 344
+ IV+AR R + +T EL +++ G RGR I ATR FQALRIAVNDEL
Sbjct: 180 RRIARAIVEARQRRPITTTDELAEIVSRALGGRRGR----IHPATRTFQALRIAVNDELT 235
Query: 345 TLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDD 404
+L+++L + L GGR+ +I+FHSLEDRIVKQ
Sbjct: 236 SLDAALPQIVELLVVGGRMAIITFHSLEDRIVKQ-------------------------- 269
Query: 405 NINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
++R Q + +++T++P+ S+EE+R+N R RSAKLRV ++
Sbjct: 270 -----FMRAEAQAGHLRLITRKPVEASSEEQRINPRSRSAKLRVAER 311
>gi|422422754|ref|ZP_16499707.1| S-adenosyl-methyltransferase MraW [Listeria seeligeri FSL S4-171]
gi|313637016|gb|EFS02589.1| S-adenosyl-methyltransferase MraW [Listeria seeligeri FSL S4-171]
Length = 312
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 129/340 (37%), Positives = 178/340 (52%), Gaps = 36/340 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D+ + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 4 HETVLLHETVDMLEV-KPDGIYVDATLGGAGHSEYLLNKLNEKGHLFAFDQDQTAIDNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L + + TF K NFR++K L + I S VD IL DLG+SS Q++
Sbjct: 63 IKLAA--------YSDKVTFVKSNFRYMKEALNE--HGI--SEVDGILYDLGVSSPQLDE 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS D LDMRMD + L A+ ++N W ++ R+ +YGEE + +I +
Sbjct: 111 RERGFSYHQDAALDMRMDREQELTAKIVVNEWSYQDLIRIFFQYGEEKFSKQIAREIERR 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +TGELVD+I++ P R+ G R FQA+RIAVNDEL +E SL
Sbjct: 171 REVKPIETTGELVDIIKTAIPAPARRKGGH--PGKRTFQAIRIAVNDELGAVEDSLEKAL 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNINETWIR 412
+ PGGR+ VI+FHSLEDRI K F +E +G + L I D+
Sbjct: 229 TLIKPGGRISVITFHSLEDRITKHLF-------QEATKGPDLPPGLPVIPDE-------- 273
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ K+ T++PI PS EE N R RSAKLRVI+KI
Sbjct: 274 ---YKPDFKLATRKPIVPSEEELEQNNRARSAKLRVIEKI 310
>gi|420177430|ref|ZP_14683766.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIHLM057]
gi|420180270|ref|ZP_14686525.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIHLM053]
gi|394247814|gb|EJD93056.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIHLM057]
gi|394251309|gb|EJD96408.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
NIHLM053]
Length = 311
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 120/335 (35%), Positives = 179/335 (53%), Gaps = 30/335 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ VML E +D + + + +VDCTLG AGH+ ++ + I +D D +A+ A+
Sbjct: 4 HVSVMLNETID-YLNIKEDGVYVDCTLGGAGHALYLLNQLNDKGRLIAIDQDLTAIENAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L LH H NFR + ++L +++ + VD I DLG+SS Q++ P
Sbjct: 63 EVLKEHLHKVTFVH-------NNFRELTNILNELEID----KVDGIYYDLGVSSPQLDVP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D LDMRMD SL A +++N W + ++ YGEE + +I R
Sbjct: 112 ERGFSYHNDAKLDMRMDQTQSLSAYEVVNQWSYEALVKIFYRYGEEKFSKQIARRIEAHR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +T ELVD+I+ P + RR+G A RVFQA+RIAVNDEL E S+ +
Sbjct: 172 EQQPIETTLELVDVIKEGIPA-KARRKGG-HPAKRVFQAIRIAVNDELSAFEDSVEQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
C+ GGR+ VI+FHSLEDR+ KQ F ++ E + R + I E + ++
Sbjct: 230 CVKVGGRISVITFHSLEDRLCKQIF--------QEFEKGPDVPRGL--PVIPEAYTPKL- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
K ++PIT + ++ N R RSAKLRV +
Sbjct: 279 -----KRANRKPITATDDDLNENNRARSAKLRVAE 308
>gi|423098940|ref|ZP_17086648.1| S-adenosyl-methyltransferase MraW [Listeria innocua ATCC 33091]
gi|370794767|gb|EHN62530.1| S-adenosyl-methyltransferase MraW [Listeria innocua ATCC 33091]
Length = 312
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 129/340 (37%), Positives = 176/340 (51%), Gaps = 36/340 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D+ + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 4 HETVLLHETVDMLEV-KPDGIYVDATLGGAGHSEYLLNKLNEQGHLFAFDQDQTAIDNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L + TF K NFR++K L + I VD IL DLG+SS Q++
Sbjct: 63 IKLAE--------YSDRVTFIKSNFRYMKEALNE--RGI--EAVDGILYDLGVSSPQLDE 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS D LDMRMD + L A+ ++N W ++ R+ +YGEE + +I +
Sbjct: 111 RERGFSYHQDAALDMRMDQEQELTAKKVVNEWSYQDLIRIFFQYGEEKFSKQIAREIERR 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +TGELVD+I++ P R+ G R FQA+RIAVNDEL +E SL
Sbjct: 171 REVKPIETTGELVDIIKTAIPAPARRKGGH--PGKRTFQAIRIAVNDELGAVEDSLENAL 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNINETWIR 412
L PGGR+ VI+FHSLEDRI K F +E +G + L I D+
Sbjct: 229 TLLKPGGRISVITFHSLEDRITKHLF-------QEATKGPDLPPGLPVIPDE-------- 273
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ K+ T++PI PS EE N R RSAKLRVI+KI
Sbjct: 274 ---YKPDFKLATRKPIVPSEEELEQNNRARSAKLRVIEKI 310
>gi|422419663|ref|ZP_16496618.1| S-adenosyl-methyltransferase MraW [Listeria seeligeri FSL N1-067]
gi|313632482|gb|EFR99498.1| S-adenosyl-methyltransferase MraW [Listeria seeligeri FSL N1-067]
Length = 312
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 129/340 (37%), Positives = 178/340 (52%), Gaps = 36/340 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D+ + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 4 HETVLLHETVDMLEV-KPDGIYVDATLGGAGHSEYLLNKLNEKGHLFAFDQDQTAIDNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L + + TF K NFR++K L + I S VD IL DLG+SS Q++
Sbjct: 63 IKLAA--------YSDKVTFVKSNFRYMKEALNE--RGI--SEVDGILYDLGVSSPQLDE 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS D LDMRMD + L A+ ++N W ++ R+ +YGEE + +I +
Sbjct: 111 RERGFSYHQDAALDMRMDREQELTAKIVVNEWSYQDLIRIFFQYGEEKFSKQIAREIERR 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +TGELVD+I++ P R+ G R FQA+RIAVNDEL +E SL
Sbjct: 171 REVKPIETTGELVDIIKTAIPAPARRKGGH--PGKRTFQAIRIAVNDELGAVEDSLEKAL 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNINETWIR 412
+ PGGR+ VI+FHSLEDRI K F +E +G + L I D+
Sbjct: 229 TLIKPGGRISVITFHSLEDRITKHLF-------QEATKGPDLPPGLPVIPDE-------- 273
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ K+ T++PI PS EE N R RSAKLRVI+KI
Sbjct: 274 ---YKPDFKLATRKPIVPSEEELEQNNRARSAKLRVIEKI 310
>gi|47097273|ref|ZP_00234832.1| S-adenosyl-methyltransferase MraW [Listeria monocytogenes str. 1/2a
F6854]
gi|254912599|ref|ZP_05262611.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Listeria
monocytogenes J2818]
gi|254936926|ref|ZP_05268623.1| S-adenosyl-methyltransferase MraW [Listeria monocytogenes F6900]
gi|386047693|ref|YP_005966025.1| methylase MraW [Listeria monocytogenes J0161]
gi|47014346|gb|EAL05320.1| S-adenosyl-methyltransferase MraW [Listeria monocytogenes str. 1/2a
F6854]
gi|258609526|gb|EEW22134.1| S-adenosyl-methyltransferase MraW [Listeria monocytogenes F6900]
gi|293590591|gb|EFF98925.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Listeria
monocytogenes J2818]
gi|345534684|gb|AEO04125.1| methylase MraW [Listeria monocytogenes J0161]
Length = 312
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 129/340 (37%), Positives = 176/340 (51%), Gaps = 36/340 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D+ + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 4 HETVLLHETVDMLEV-KPDGIYVDATLGGAGHSEYLLNKLNEKGHLFAFDQDQTAIDNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L + TF K NFR +K L + I VD IL DLG+SS Q++
Sbjct: 63 IKLAD--------YSDKVTFIKANFRDMKEALNE--RGI--EAVDGILYDLGVSSPQLDE 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS D LDMRMD + L A+ ++N W ++ R+ +YGEE + +I +
Sbjct: 111 RERGFSYHQDAALDMRMDQEQELTAKTVVNEWSYQDLIRIFFQYGEEKFSKQIAREIERR 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +TGELVD+I++ P R+ G R FQA+RIAVNDEL +E SL
Sbjct: 171 REVKPIETTGELVDIIKTAIPAPARRKGGH--PGKRTFQAIRIAVNDELGAVEDSLEKAL 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNINETWIR 412
+ PGGR+ VI+FHSLEDRI KQ F +E +G + L I D+
Sbjct: 229 TLIKPGGRISVITFHSLEDRITKQLF-------QEATKGPDLPPGLPVIPDE-------- 273
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ K+ T++PI PS EE N R RSAKLRVI+KI
Sbjct: 274 ---YKPDFKLATRKPIVPSEEELEQNNRARSAKLRVIKKI 310
>gi|402833404|ref|ZP_10882023.1| S-adenosyl-methyltransferase MraW [Selenomonas sp. CM52]
gi|402280715|gb|EJU29416.1| S-adenosyl-methyltransferase MraW [Selenomonas sp. CM52]
Length = 311
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 128/340 (37%), Positives = 181/340 (53%), Gaps = 36/340 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAII-RAHPELKLHIGVDVDPSALAKA 174
H VM E L + + ++VDCTLG AGH+ I R P +L IG+D D +A+ A
Sbjct: 5 HTSVMPEETLAALAV-KPAGTYVDCTLGGAGHARRIADRLFPAGRL-IGLDQDEAAIRAA 62
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+ L + + NFR + SVL +++ + VD +L DLG+SS Q++
Sbjct: 63 KERLAGV-------SCRVDVVRSNFRALDSVL----QSLGVTSVDGVLFDLGVSSHQIDT 111
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS + D PLDMRMD L A +++N + +AE+ R+ R+YGEE W + A
Sbjct: 112 AERGFSYMQDAPLDMRMDTSRLLSAHEVVNEYDEAELWRIFRDYGEE-RWAKRIAAFIAA 170
Query: 295 RLRGG-LHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
+G + +TGELVD++ P RR A R+FQA+RI VNDEL L++S+
Sbjct: 171 ARQGKPIETTGELVDIVCRAVP-KSVRRAAGGHPAKRIFQAIRIEVNDELGILQASVENA 229
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
LAPGGR+ +++FHSLEDRIVKQ F +E A G I +
Sbjct: 230 VHALAPGGRIAILTFHSLEDRIVKQAF-------KELARG-----------CICPPGLPV 271
Query: 414 IIQGWNGKI-LTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ G K+ L + PSA E N R +SAKLRV +K+
Sbjct: 272 CVCGHEPKVKLLGKAQKPSAAESAENPRAKSAKLRVAEKL 311
>gi|46580916|ref|YP_011724.1| S-adenosyl-methyltransferase MraW [Desulfovibrio vulgaris str.
Hildenborough]
gi|120601783|ref|YP_966183.1| S-adenosyl-methyltransferase MraW [Desulfovibrio vulgaris DP4]
gi|387154163|ref|YP_005703099.1| S-adenosyl-methyltransferase MraW [Desulfovibrio vulgaris RCH1]
gi|50402222|sp|P62470.1|RSMH_DESVH RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|263446337|sp|A1VBE0.1|RSMH_DESVV RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|46450336|gb|AAS96984.1| S-adenosyl-methyltransferase MraW [Desulfovibrio vulgaris str.
Hildenborough]
gi|120562012|gb|ABM27756.1| S-adenosyl-methyltransferase MraW [Desulfovibrio vulgaris DP4]
gi|311234607|gb|ADP87461.1| S-adenosyl-methyltransferase MraW [Desulfovibrio vulgaris RCH1]
Length = 323
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 136/350 (38%), Positives = 185/350 (52%), Gaps = 35/350 (10%)
Query: 106 ESIIQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVD 165
E++ + ++HIPV+L EVL+ + + R ++D TLG AGH+SA++ E G+D
Sbjct: 6 ENMTAPEWAAHIPVLLEEVLE-YLAPRKGGRYLDGTLGLAGHASAVLERAGEGTELCGLD 64
Query: 166 VDPSALAKARAHLNSLLHGQAH-PHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMD 224
DP AL +A A L GQ H HL+ F + +++ VD L+D
Sbjct: 65 RDPEALRRATARLAPFA-GQTHLYHLRYSEFEEAL-----------DDLGWPTVDGALID 112
Query: 225 LGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNW 284
+G+SSMQ++ ERGFS DGPLDMRMDP A A ++N + ++ YGEE
Sbjct: 113 IGVSSMQIDLAERGFSFHADGPLDMRMDPDAHESAWRLVNRERHEVLRDIIARYGEEPMA 172
Query: 285 HLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELK 344
+ IV AR G + +T +L +++ P + R ATR FQALR+AVNDEL
Sbjct: 173 GRIARAIVDARNTGSIDTTLQLAAIVERAYPA-KWRATARNHPATRTFQALRMAVNDELG 231
Query: 345 TLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDD 404
LE L A LAPGGRL VISFHSLEDRIVK R AEG R R
Sbjct: 232 ELERFLDAILARLAPGGRLVVISFHSLEDRIVKHRM-------RHWAEG----CRCPRH- 279
Query: 405 NINETWIRQIIQGWNG--KILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ + + G + +ILTKRP+T + E N R SAKLR +K+
Sbjct: 280 ------VPRCVCGHSPEVRILTKRPVTATDGELARNPRASSAKLRAAEKV 323
>gi|400289370|ref|ZP_10791400.1| S-adenosyl-methyltransferase MraW [Streptococcus ratti FA-1 = DSM
20564]
gi|399922329|gb|EJN95143.1| S-adenosyl-methyltransferase MraW [Streptococcus ratti FA-1 = DSM
20564]
Length = 316
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 126/340 (37%), Positives = 182/340 (53%), Gaps = 35/340 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+L E +D + +VD TLG AGHS ++ + D D A+ A+
Sbjct: 7 HITVLLHEAIDKLDV-KPDGIYVDATLGGAGHSEYLLSKLGKKGHLYCFDQDQKAIENAQ 65
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L Q + TF K NFR++K L + EN+ +D I DLG+SS Q++
Sbjct: 66 KRL------QPYAEAGQVTFIKDNFRNLKQRLAE--ENVFE--IDGICYDLGVSSPQLDE 115
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS D PLDMRM+ +A L A D++N++ ++ R+ +YGE+ + KI +A
Sbjct: 116 GERGFSYKKDAPLDMRMNQEAELTAFDVVNTYDYHDLVRIFFKYGEDRFSKQIARKIEKA 175
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +TGEL ++I+S P +++G A ++FQA+RI VNDEL E SL+
Sbjct: 176 RQEKAITTTGELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAAEESLYQAL 233
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTF--LSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
D LA GR+ VI+FHSLEDR+VKQ F ++ID + L I DD + +
Sbjct: 234 DLLAVNGRISVITFHSLEDRLVKQLFKEATVIDVPK--------GLPFIPDD-LQPKF-- 282
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+++++PI P E N R SAKLRVIQKI
Sbjct: 283 --------SLVSRKPILPGQAEIEANNRAHSAKLRVIQKI 314
>gi|260881846|ref|ZP_05405354.2| S-adenosyl-methyltransferase MraW [Mitsuokella multacida DSM 20544]
gi|260847818|gb|EEX67825.1| S-adenosyl-methyltransferase MraW [Mitsuokella multacida DSM 20544]
Length = 330
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 121/339 (35%), Positives = 174/339 (51%), Gaps = 34/339 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI VML E + +++ +VDCTLG AGHS I IG+D D A+ A+
Sbjct: 10 HISVMLEETVKGLVTNKE-GIYVDCTLGGAGHSHRIAELLSPKGRIIGIDQDEEAIEAAK 68
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L + + NF H++ +L + VD ++ DLG+SS Q++
Sbjct: 69 ERLKDV-------KCRVDIVHSNFSHLEEILEAQGAPL----VDGVVFDLGVSSHQIDTA 117
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS + D PLDMRMDP+A A D++N++ + E+ R+ +YGEE + IV+ R
Sbjct: 118 ERGFSYMHDAPLDMRMDPEAKFSAYDVVNTYSEKELDRIFHDYGEERWGRRIAQFIVKER 177
Query: 296 LRGGLHSTGELVDLIQSVTP-GMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
++ + TGELVD+I P +R G A R+FQA+RI VNDEL LE +
Sbjct: 178 MKKPIERTGELVDIICKAVPKAVRQAANGH--PAKRIFQAIRIEVNDELGILEKAFRTAV 235
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
L PGGR+ +I+FHSLEDRI KQT +E A G I +
Sbjct: 236 HHLKPGGRIAIITFHSLEDRIAKQTL-------KEMARG-----------CICPPELPVC 277
Query: 415 IQGWNGKI-LTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ +I L +P +A+E N R +SAKLR+ +K+
Sbjct: 278 VCHHKPEIRLLGKPKQATADELAHNSRSKSAKLRIAEKL 316
>gi|193213705|ref|YP_001999658.1| S-adenosyl-methyltransferase MraW [Chlorobaculum parvum NCIB 8327]
gi|263445798|sp|B3QLX2.1|RSMH_CHLP8 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|193087182|gb|ACF12458.1| S-adenosyl-methyltransferase MraW [Chlorobaculum parvum NCIB 8327]
Length = 318
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 119/344 (34%), Positives = 174/344 (50%), Gaps = 33/344 (9%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPEL---KLHIGVDVDPS 169
Q H PV+ + + I ++D TLG GHS ++R L L +G+D D
Sbjct: 4 QEYHEPVLADATTSLLVTRPGI--YIDGTLGGGGHSLELLRRLDALDGESLLVGIDQDSY 61
Query: 170 ALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRS-GVDAILMDLGMS 228
AL A L K NF ++ +L + V +L+DLG+S
Sbjct: 62 ALEAAGQKLQDFGD-------KAILLRGNFSMVRELLAPVKRGPGEGLEVMGLLLDLGVS 114
Query: 229 SMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQ 288
S Q++ P RGFS L DGPLDMRMDP L A DI+N + + + R+ YGEE++ +
Sbjct: 115 SFQIDTPVRGFSYLRDGPLDMRMDPDGPLTAADIVNDYEEQALARLFFRYGEEAHGGRIA 174
Query: 289 NKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLES 348
+V AR + +TG L ++++ P R+ IKT +R++QALRI VNDEL L+
Sbjct: 175 RAVVSARSVAPITTTGGLAEVVRRACP----RKDSPIKTLSRIYQALRIEVNDELGVLQQ 230
Query: 349 SLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE 408
+L F L+PGGR VIS+HSLEDRIVK+ F + R D
Sbjct: 231 ALEDGFAVLSPGGRFAVISYHSLEDRIVKRFFSA----------------RCTADWGPKG 274
Query: 409 TWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+R+ ++ +++T++ + E N R RSA+LRVIQK+
Sbjct: 275 LPLREPLKPAEAELVTRKSVQAGEAEVSRNPRARSARLRVIQKL 318
>gi|229586901|ref|YP_002845402.1| S-adenosyl-methyltransferase MraW [Rickettsia africae ESF-5]
gi|259495903|sp|C3PNZ9.1|RSMH_RICAE RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|228021951|gb|ACP53659.1| S-adenosyl-methyltransferase MraW [Rickettsia africae ESF-5]
Length = 307
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 125/341 (36%), Positives = 188/341 (55%), Gaps = 42/341 (12%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHI-GVDVDPSALAK 173
SH+ VML E+L+ S + S++DCT GA G+S AI+ + ++ +D DP+ + +
Sbjct: 4 SHVSVMLNEMLEALSP-KAGESYLDCTFGAGGYSKAILES---CNCYVTALDRDPNVIKR 59
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
A S +G+ ++T+ FA +F +K D I++DLG+SSMQ++
Sbjct: 60 AEEIQQS--YGERFDFVETN-FADSFAKLKE-----------KKFDGIVLDLGVSSMQLD 105
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
+RGFS L +GPLDMRM Q L AE+ +N+ + E+ V+ +YG+ES + +IV+
Sbjct: 106 IADRGFSFLHNGPLDMRMSGQG-LSAEEFVNAAEEKELADVIYKYGDESFSRRIAKRIVE 164
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
R + ST +L ++++S G R+G I AT+ FQA+RI VNDEL LE L
Sbjct: 165 YRKTARIDSTSKLAEIVRSSI----GFRKGKIDPATKTFQAIRIYVNDELGELEQFLVNV 220
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE--TWI 411
+ L GRL V+SFHSLEDRIVK F +E++E + +DD + W+
Sbjct: 221 KNILKKDGRLVVVSFHSLEDRIVKNFF-------KENSEKPVVRSKYAKDDMTIDPNKWL 273
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
KI+T + + PS +E LN R RSAKLR + I
Sbjct: 274 ---------KIITNKALAPSDKEVGLNIRARSAKLRAAKAI 305
>gi|16801213|ref|NP_471481.1| S-adenosyl-methyltransferase MraW [Listeria innocua Clip11262]
gi|20139025|sp|Q929X6.1|RSMH_LISIN RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|16414661|emb|CAC97377.1| lin2147 [Listeria innocua Clip11262]
Length = 312
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 129/340 (37%), Positives = 176/340 (51%), Gaps = 36/340 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D+ + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 4 HETVLLHETVDMLEV-KPDGIYVDATLGGAGHSEYLLNKLNEQGHLFAFDQDQTAIDNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L + TF K NFR++K L + I VD IL DLG+SS Q++
Sbjct: 63 IKLAE--------YSDRVTFIKSNFRYMKEALNE--RGI--EAVDGILYDLGVSSPQLDE 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS D LDMRMD + L A+ ++N W ++ R+ +YGEE + +I +
Sbjct: 111 RERGFSYHQDAALDMRMDQEQELTAKKVVNEWSYQDLIRIFFQYGEEKFSKQIAREIERR 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +TGELVD+I++ P R+ G R FQA+RIAVNDEL +E SL
Sbjct: 171 REVKPIETTGELVDIIKTAIPAPARRKGGH--PGKRTFQAIRIAVNDELGAVEDSLENAL 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNINETWIR 412
L PGGR+ VI+FHSLEDRI K F +E +G + L I D+
Sbjct: 229 TLLKPGGRISVITFHSLEDRITKYLF-------QEATKGPDLPPGLPVIPDE-------- 273
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ K+ T++PI PS EE N R RSAKLRVI+KI
Sbjct: 274 ---YKPDFKLATRKPIVPSEEELEQNNRARSAKLRVIEKI 310
>gi|365873699|ref|ZP_09413232.1| S-adenosyl-methyltransferase MraW [Thermanaerovibrio velox DSM
12556]
gi|363983786|gb|EHM09993.1| S-adenosyl-methyltransferase MraW [Thermanaerovibrio velox DSM
12556]
Length = 300
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 179/339 (52%), Gaps = 54/339 (15%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+PVML EVL + S + VD TLGA GHS AI+ P L IG+D D S LA A+
Sbjct: 3 HVPVMLNEVLHMLSPFEDVELVVDGTLGAGGHSMAILENCPNAFL-IGIDQDESILAIAK 61
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDA---ILMDLGMSSMQV 232
L++ + + NFR I+S+L +G D+ L DLG+SS+QV
Sbjct: 62 DRLSAFKD-------RVYFALGNFRDIRSILSD-------AGFDSAQVFLFDLGISSLQV 107
Query: 233 NNPERGFSVLGDGPLDMRMDPQ---ASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
++PERGFS +GPLDMRMD +SL A DI+N+W AE+ + R YGE+ +
Sbjct: 108 DSPERGFSFNYNGPLDMRMDMGRVCSSLTAADIVNTWSPAELTMLFRRYGEDPFAFQVAR 167
Query: 290 KIVQARLRGG-LHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLES 348
I + R + G + + ELV++I+S P +R+ A R+FQALRI VNDE+ LE
Sbjct: 168 AICRRREKDGPIMTCEELVEVIRSAVPA-PAQRKMRGHPARRIFQALRIQVNDEMGALED 226
Query: 349 SLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE 408
L GG++ I++HSLEDR+VK RN+R
Sbjct: 227 LLDELPQITRRGGKVIFITYHSLEDRMVK---------------------RNMR------ 259
Query: 409 TWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLR 447
+W + GK +T RP+ PS EE LN R RSAK+R
Sbjct: 260 SW----AEAGLGKPMTSRPLVPSEEELELNRRSRSAKVR 294
>gi|262831468|sp|C5WIJ4.2|RSMH_STRDG RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
Length = 316
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 123/341 (36%), Positives = 186/341 (54%), Gaps = 37/341 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG +GHS+ ++ E D D A+ A+
Sbjct: 7 HVTVLLHETVDMLDI-KPNGIYVDATLGGSGHSAYLLSKLSEQGHLYCFDQDQKAIDNAQ 65
Query: 176 AHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQ--IDENILRSGVDAILMDLGMSSMQ 231
L S + GQ TF K NFRH+K+ L +DE +D IL DLG+SS Q
Sbjct: 66 VTLKSYIDKGQV-------TFIKDNFRHLKARLTALGVDE------IDGILYDLGVSSPQ 112
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ ERGFS D PLDMRMD QA L A D++N++P ++ ++ +YGE+ + KI
Sbjct: 113 LDERERGFSYNQDAPLDMRMDRQAPLTAYDVVNTYPFNDLVKIFFKYGEDKFSKQIARKI 172
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
QAR + +T EL +LI++ P +++G A ++FQA+RI VNDEL + S+
Sbjct: 173 EQARAIKPIETTTELAELIKAAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADESIQ 230
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
+ LA GR+ VI+FHSLEDR+ KQ F +E + + + +++ T+
Sbjct: 231 DAMELLALDGRISVITFHSLEDRLTKQLF-------KEASTVDVPKGLPFIPEDMKPTF- 282
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++++++PI PS EE N R SAKLRV +KI
Sbjct: 283 ---------ELVSRKPILPSQEELAANNRAHSAKLRVAKKI 314
>gi|153953806|ref|YP_001394571.1| S-adenosyl-methyltransferase MraW [Clostridium kluyveri DSM 555]
gi|219854422|ref|YP_002471544.1| hypothetical protein CKR_1079 [Clostridium kluyveri NBRC 12016]
gi|263447433|sp|B9E0V5.1|RSMH_CLOK1 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|146346687|gb|EDK33223.1| MraW [Clostridium kluyveri DSM 555]
gi|219568146|dbj|BAH06130.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 309
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 118/337 (35%), Positives = 188/337 (55%), Gaps = 32/337 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HIPV+L E +D + + +VDCTLG GHS I++ + I +D D SA+ +
Sbjct: 5 HIPVLLKETIDSLNIKQD-GVYVDCTLGGGGHSLEILKRLSDKGKLIAIDQDISAINWSE 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L + + H NF +I+ +L ++ + VD I+MDLG+SS Q++
Sbjct: 64 ERLKNF-KNIIYVH-------DNFYNIQQILKELKID----KVDGIIMDLGVSSYQLDEG 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
+RGFS + D PLDMRM+ +SL A +I+N + + E+ R++R+YGEE+ + IV+AR
Sbjct: 112 KRGFSYMKDAPLDMRMNRDSSLSAYEIVNQYNEEELCRIIRDYGEENFSRRISKFIVKAR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +T +LV +I+ P ++ +++G A R FQA+RI VN+ELK L+ ++
Sbjct: 172 EESPISTTLQLVGIIKKAIP-LKFQKEGH--PAKRTFQAIRIEVNEELKILDKAVEDGVA 228
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L GGR+ +I+FHSLEDRI+K F + E D I + I+
Sbjct: 229 NLNTGGRIAIITFHSLEDRIIKSKFKML-----------ENPCTCPADFPICICGKKPIV 277
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
KI+ K+PI P+ EE+ +N R +S+KLR+ ++I
Sbjct: 278 -----KIVNKKPIVPTEEEKSINPRSKSSKLRIAERI 309
>gi|114327101|ref|YP_744258.1| S-adenosyl-methyltransferase MraW [Granulibacter bethesdensis
CGDNIH1]
gi|122327917|sp|Q0BV17.1|RSMH_GRABC RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|114315275|gb|ABI61335.1| S-adenosyl-methyltransferase mraW [Granulibacter bethesdensis
CGDNIH1]
Length = 334
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 125/337 (37%), Positives = 179/337 (53%), Gaps = 34/337 (10%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
+H+PV+L EVL+ S + F+D T G G++ AI+ + + VD DP+A+ +
Sbjct: 23 THVPVLLNEVLETLSPAPG-GVFLDGTFGGGGYTRAILDTAEDSTVW-AVDRDPAAITRG 80
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
A L + G + H NF + S+L N L D I++D+G+SS Q+++
Sbjct: 81 EA-LAARYRG------RLHLIQGNFSQMASLLTDRGVNAL----DGIVLDIGVSSFQIDD 129
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
P+RGFS DGPLDMRM + + A D++ P+AE+ +L E GEE + IV A
Sbjct: 130 PDRGFSFRTDGPLDMRMAGEGT-SAADLIARLPEAEIANILYELGEERKSRQIARAIVSA 188
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +TG L +I+ V P R I ATR FQALRIAVNDEL LE +L
Sbjct: 189 RAEEPITTTGRLASIIRCVVPPDRS----GIDPATRSFQALRIAVNDELGELERALQQAT 244
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDN-INETWIRQ 413
+ L PGGRL ++SFHSLEDRIVK+ F++ DA GN + T R
Sbjct: 245 NLLQPGGRLVIVSFHSLEDRIVKR-FMN-------DAAGNAPSPSRYDPRGLVARTEPRF 296
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
+++T + + P E+ N R RSA+LR I+
Sbjct: 297 -------RLITSKAVRPGTAEQNANPRSRSARLRAIE 326
>gi|15892780|ref|NP_360494.1| S-adenosyl-methyltransferase MraW [Rickettsia conorii str. Malish
7]
gi|20139037|sp|Q92HB4.1|RSMH_RICCN RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|15619960|gb|AAL03395.1| unknown [Rickettsia conorii str. Malish 7]
Length = 307
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 126/341 (36%), Positives = 187/341 (54%), Gaps = 42/341 (12%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHI-GVDVDPSALAK 173
SH+ VML E+L+ S + S++DCT GA G+S AI+ + ++ +D DP+ +
Sbjct: 4 SHVSVMLNEMLEALSP-KAGESYLDCTFGAGGYSKAILES---CNCYVTALDRDPNVIK- 58
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
RA +G+ ++T+ FA +F +K D I++DLG+SSMQ++
Sbjct: 59 -RAEEIQQHYGERFDFVETN-FADSFAKLKE-----------KKFDGIVLDLGVSSMQLD 105
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
+RGFS L DGPLDMRM Q L AE+ +N+ + E+ V+ +YG+ES + +IV+
Sbjct: 106 IADRGFSFLHDGPLDMRMSGQG-LSAEEFVNAAEEKELADVIYKYGDESFSRRIAKRIVE 164
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
R + ST +L ++++S G R+G I AT+ FQA+RI VNDEL LE L
Sbjct: 165 YRKTARIDSTSKLAEIVRSSI----GFRKGKIDPATKTFQAIRIYVNDELGELEQFLVNV 220
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE--TWI 411
+ L GRL V+SFHSLEDRIVK F +E++E + +DD + W+
Sbjct: 221 KNILKKDGRLVVVSFHSLEDRIVKNFF-------KENSEKPVVRSKYAKDDMTIDPNKWL 273
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
KI+T + + PS +E LN R RSAKLR + I
Sbjct: 274 ---------KIITNKALAPSDKEVGLNIRARSAKLRAAKAI 305
>gi|116494758|ref|YP_806492.1| S-adenosyl-methyltransferase MraW [Lactobacillus casei ATCC 334]
gi|122263824|sp|Q039S2.1|RSMH_LACC3 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|116104908|gb|ABJ70050.1| SAM-dependent methyltransferase for cell envelope biogenesis
[Lactobacillus casei ATCC 334]
Length = 313
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 122/317 (38%), Positives = 171/317 (53%), Gaps = 30/317 (9%)
Query: 136 SFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTF 195
++VD TLG GH+ I+ H I D D +A+A A +L H
Sbjct: 25 TYVDATLGRGGHTRQILN-HLTTGRLIAFDQDEAAIATVTADFGTLPKQLTLVH------ 77
Query: 196 AKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQA 255
+NFR + L + + VD IL DLG+SS Q ++ +RGFS D PLDMRMD +
Sbjct: 78 -RNFRDLTDALTTLG----ITEVDGILYDLGVSSPQFDDSKRGFSYRFDAPLDMRMDQRQ 132
Query: 256 SLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTP 315
+L A+ I+N WP A++ R+ YGEE + +I QAR + +T +LV+LI++ P
Sbjct: 133 TLDAKTIVNEWPYADLVRIFSRYGEEHFSKQIARRIEQARTVQPITTTFQLVELIKAGIP 192
Query: 316 GMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRI 375
+ RR G A +VFQA+RIAVNDEL LESSL + GGR+ VI+F SLEDR+
Sbjct: 193 A-KARRTGG-HPAKKVFQAIRIAVNDELSALESSLEQALKLINVGGRISVITFQSLEDRL 250
Query: 376 VKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEE 435
VK F +E+ +++D I Q N +++ ++PI PS EE
Sbjct: 251 VKTMF---------------KEVSSVQDVPRGLPVIPASAQP-NYRLVNRKPILPSEEEL 294
Query: 436 RLNCRCRSAKLRVIQKI 452
+N R SAKLRVI+KI
Sbjct: 295 AVNHRAHSAKLRVIEKI 311
>gi|238650666|ref|YP_002916519.1| S-adenosyl-methyltransferase MraW [Rickettsia peacockii str.
Rustic]
gi|259495904|sp|C4K1M0.1|RSMH_RICPU RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|238624764|gb|ACR47470.1| S-adenosyl-methyltransferase MraW [Rickettsia peacockii str.
Rustic]
Length = 307
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 125/341 (36%), Positives = 188/341 (55%), Gaps = 42/341 (12%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHI-GVDVDPSALAK 173
SH+ VML ++L+ S + S++DCT GA G+S AI+ + ++ +D DP+ + +
Sbjct: 4 SHVSVMLNKMLEALSP-KAGESYLDCTFGAGGYSKAILES---CNCYVTALDRDPNVIKR 59
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
A + +G+ ++T+ FA +F +K D I++DLG+SSMQ++
Sbjct: 60 AEEIQQN--YGERFDFVETN-FAGSFAKLKE-----------KKFDGIVLDLGVSSMQLD 105
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
+RGFS L DGPLDMRM Q L AE+ +N+ E+ V+ +YG+ES + +IV+
Sbjct: 106 IADRGFSFLHDGPLDMRMSGQG-LSAEEFVNAAEAKELADVIYKYGDESFSRRIAKRIVE 164
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
R + STG+L ++++S G R+G I AT+ FQA+RI VNDEL LE L
Sbjct: 165 YRKTARIDSTGKLAEIVRSSI----GFRKGKIDPATKTFQAIRIYVNDELGELEQFLVNV 220
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE--TWI 411
+ L GRL V+SFHSLEDRIVK F +E++E + +DD + W+
Sbjct: 221 KNILKKDGRLVVVSFHSLEDRIVKNFF-------KENSEKPVVRSKYAKDDMTIDPNKWL 273
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
KI+T + + PS +E LN R RSAKLR + I
Sbjct: 274 ---------KIITNKALAPSDKEVGLNIRARSAKLRAAKAI 305
>gi|430824058|ref|ZP_19442625.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E0120]
gi|430867371|ref|ZP_19482365.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1574]
gi|431743230|ref|ZP_19532110.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E2071]
gi|430441442|gb|ELA51539.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E0120]
gi|430550382|gb|ELA90178.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1574]
gi|430607064|gb|ELB44392.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E2071]
Length = 319
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 130/340 (38%), Positives = 177/340 (52%), Gaps = 35/340 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHI-GVDVDPSALAKA 174
H VML E +D + + +VDCTLG AGHS ++ + K H+ D D A+ A
Sbjct: 7 HYTVMLKETVDGLNI-KPDGVYVDCTLGGAGHSEYLL-SQLSSKGHLYAFDQDQKAIDHA 64
Query: 175 RAHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
+ L S + G TF K NFR ++ L + + VD IL DLG+SS Q+
Sbjct: 65 KLRLASYVEQGMV-------TFIKANFRELEERLSEYVDK-----VDGILYDLGVSSPQL 112
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ ERGFS D PLDMRMD A L A ++N + E+ ++ YGEE + +I
Sbjct: 113 DEAERGFSYHQDAPLDMRMDQSAPLSAYHVINEYSYHELVKIFFRYGEEKFSKQIAREIE 172
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
+ R + +TGELV++I+ V P R+ G A R+FQA+RIAVNDEL E+SL
Sbjct: 173 RVRKTKPIQTTGELVEIIKQVIPAPARRKGGH--PAKRIFQAVRIAVNDELGAEEASLEQ 230
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
L GR+ VI+FHSLEDRIVK F +E ++D I
Sbjct: 231 AIRLLKVNGRISVITFHSLEDRIVKSMF---------------KEYSTVQDLPPGLPVIP 275
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
Q K++T++PI PS EE N R RSAKLR+ +KI
Sbjct: 276 DEFQP-ELKVITRKPILPSEEELTENNRSRSAKLRIAEKI 314
>gi|255527766|ref|ZP_05394619.1| S-adenosyl-methyltransferase MraW [Clostridium carboxidivorans P7]
gi|296186678|ref|ZP_06855080.1| S-adenosyl-methyltransferase MraW [Clostridium carboxidivorans P7]
gi|296187067|ref|ZP_06855466.1| S-adenosyl-methyltransferase MraW [Clostridium carboxidivorans P7]
gi|255508553|gb|EET84940.1| S-adenosyl-methyltransferase MraW [Clostridium carboxidivorans P7]
gi|296048354|gb|EFG87789.1| S-adenosyl-methyltransferase MraW [Clostridium carboxidivorans P7]
gi|296048715|gb|EFG88147.1| S-adenosyl-methyltransferase MraW [Clostridium carboxidivorans P7]
Length = 309
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 122/338 (36%), Positives = 187/338 (55%), Gaps = 34/338 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAII-RAHPELKLHIGVDVDPSALAKA 174
H+ V+L E +D + +VDCTLG GHS I+ R P+ +L IG+D D +AL A
Sbjct: 5 HVSVLLEETIDALNVKED-GIYVDCTLGGGGHSYEILKRLSPKGRL-IGIDQDTAALKAA 62
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L + + H NF +I +L ++ NI + VD I+MDLG+SS Q++
Sbjct: 63 GDRLKQF-NNVTYVH-------NNFYNIDEILQEL--NIEK--VDGIMMDLGVSSYQLDE 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS + D PLDMRM+ +S A DI+N + + ++ ++++EYGE++ + IVQ
Sbjct: 111 AERGFSYMKDAPLDMRMNRDSSTSAYDIVNFYSEEQIFKIIKEYGEDNFAKRIAKFIVQR 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + + +T ELVD+I+ P R ++ G A R FQA+RI VN EL+ L+ ++
Sbjct: 171 REKETIKTTLELVDIIRQAIPA-RFQKDGH--PAKRTFQAIRIEVNRELQILDKAVEDSV 227
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
+ L GGR+ +I+FHSLEDR +K F + E D + + +
Sbjct: 228 NRLNKGGRIAIITFHSLEDRKIKVKFKQL-----------ENPCTCPPDFPMCVCGKKPL 276
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ K+++K+PI PS EE N R +SAKLRV ++I
Sbjct: 277 V-----KLISKKPIEPSIEESENNSRSKSAKLRVAERI 309
>gi|431751275|ref|ZP_19539966.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E2620]
gi|430615715|gb|ELB52658.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E2620]
Length = 319
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 131/341 (38%), Positives = 180/341 (52%), Gaps = 37/341 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHI-GVDVDPSALAKA 174
H VML E +D + ++ +VDCTLG AGHS ++ + K H+ D D A+ A
Sbjct: 7 HYTVMLKETVDGLNI-KSDGVYVDCTLGGAGHSEYLL-SQLSSKGHLYAFDQDQKAIDHA 64
Query: 175 RAHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQ-IDENILRSGVDAILMDLGMSSMQ 231
+ L S + G TF K NFR ++ L + +D+ VD IL DLG+SS Q
Sbjct: 65 KLRLASYVEQGMV-------TFIKANFRELEERLSEHVDK------VDGILYDLGVSSPQ 111
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ ERGFS D PLDMRMD A L A ++N + E+ ++ YGEE + +I
Sbjct: 112 LDEAERGFSYHQDAPLDMRMDQSAPLTAYHVINEYSYHELVKIFFRYGEEKFSKQIAREI 171
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
+ R + +TGELV++I+ V P R+ G A R+FQA+RIAVNDEL E+SL
Sbjct: 172 ERVRKTKPIQTTGELVEIIKQVIPAPARRKGGH--PAKRIFQAVRIAVNDELGAEEASLE 229
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
L GR+ VI+FHSLEDRIVK F +E ++D I
Sbjct: 230 QAIRLLKVNGRISVITFHSLEDRIVKSMF---------------KEYSTVQDLPPGLPVI 274
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
Q K++T++PI PS EE N R RSAKLR+ +KI
Sbjct: 275 PDEFQP-ELKVITRKPILPSEEELAENNRSRSAKLRIAEKI 314
>gi|373106707|ref|ZP_09521007.1| S-adenosyl-methyltransferase MraW [Stomatobaculum longum]
gi|371651646|gb|EHO17072.1| S-adenosyl-methyltransferase MraW [Stomatobaculum longum]
Length = 314
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 124/337 (36%), Positives = 179/337 (53%), Gaps = 32/337 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+ E +D + R +VD TLG GH+S + E IG+D D A+ A
Sbjct: 5 HISVLPRETIDSLNI-RPDGIYVDGTLGGGGHASLVAAKLGEGGRLIGIDQDADAIQAAG 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L K N+ ++ +VL +N+ D I +DLG+SS Q++N
Sbjct: 64 ERLKPFGD-------KVTVVRDNYVNLPTVL----DNLGIPRADGIYLDLGVSSYQLDNA 112
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS + D PLDMRMD +++ A D++N +AE+ R++R YGE+ + + +IV+ R
Sbjct: 113 ERGFSYMEDAPLDMRMDRRSARTAADLVNEESEAELARIIRVYGEDRFSNQIARRIVETR 172
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +TGEL L++ V P MR ++ G A R FQALRIA+N EL LE ++
Sbjct: 173 AKKPIETTGELAALVKRVIP-MRLQKTGG-HPAMRTFQALRIALNGELTVLEQAIDEMIL 230
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETW-IRQI 414
L PGGRL +I+FHSLEDRIVK+ F RN + I
Sbjct: 231 RLQPGGRLSIITFHSLEDRIVKEGF-----------------RRNASPCTCPPDFPICVC 273
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ G+++T +PI P+AEE N R RSAKLRV ++
Sbjct: 274 GKKSRGRVVTGKPIVPTAEEVAANPRSRSAKLRVFER 310
>gi|431758403|ref|ZP_19547030.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E3083]
gi|431763876|ref|ZP_19552424.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E3548]
gi|430617461|gb|ELB54334.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E3083]
gi|430621700|gb|ELB58452.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E3548]
Length = 319
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 130/340 (38%), Positives = 177/340 (52%), Gaps = 35/340 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHI-GVDVDPSALAKA 174
H VML E +D + + +VDCTLG AGHS ++ + K H+ D D A+ A
Sbjct: 7 HYTVMLKETVDGLNI-KPDGVYVDCTLGGAGHSEYLL-SQLSSKGHLYAFDQDQKAIDHA 64
Query: 175 RAHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
+ L S + G TF K NFR ++ L + + VD IL DLG+SS Q+
Sbjct: 65 KLRLASYVEQGMV-------TFIKANFRELEERLSEYVDK-----VDGILYDLGVSSPQL 112
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ ERGFS D PLDMRMD A L A ++N + E+ ++ YGEE + +I
Sbjct: 113 DEAERGFSYHQDAPLDMRMDQSAPLTAYHVINEYSYHELVKIFFRYGEEKFSKQIAREIE 172
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
+ R + +TGELV++I+ V P R+ G A R+FQA+RIAVNDEL E+SL
Sbjct: 173 RVRKTKPIQTTGELVEIIKQVIPAPARRKGGH--PAKRIFQAVRIAVNDELGAEETSLEQ 230
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
L GR+ VI+FHSLEDRIVK F +E ++D I
Sbjct: 231 AIRLLKVNGRISVITFHSLEDRIVKSMF---------------KEYSTVQDLPPGLPVIP 275
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
Q K++T++PI PS EE N R RSAKLR+ +KI
Sbjct: 276 DEFQP-ELKVITRKPILPSEEELAENNRSRSAKLRIAEKI 314
>gi|389865113|ref|YP_006367354.1| S-adenosyl-dependent methyltransferase [Modestobacter marinus]
gi|388487317|emb|CCH88875.1| S-adenosyl-dependent methyl transferase [Modestobacter marinus]
Length = 325
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 116/267 (43%), Positives = 152/267 (56%), Gaps = 14/267 (5%)
Query: 116 HIPVMLGEVLDVFSSSRTITS--FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAK 173
H+PV+L V+++ + + VDCTLG AGHS A++ AHP L+L IG+D DP A A+
Sbjct: 12 HVPVLLDRVVELLAPALAADGAVLVDCTLGLAGHSLALLAAHPGLRL-IGLDRDPDARAE 70
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
A A + + G + F + VL D+ + V +L DLG+SS+Q++
Sbjct: 71 AGARIAAAGFGD-----RATLVPAVFDELPDVLA--DQGV--GEVQGVLFDLGVSSLQLD 121
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
P RGFS D PLDMRMDP L A D++N++ E+ RVLR YGEE + + I +
Sbjct: 122 RPTRGFSYSTDAPLDMRMDPAGPLTAADVVNTYSRGELTRVLRVYGEERFAGRIASAIER 181
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
R R T L +L++ P R G A R FQALRI VNDEL L +L A
Sbjct: 182 ERAREPFTGTARLAELVRESIPAATRRTGG--HPAKRAFQALRIEVNDELGVLTRALPAA 239
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTF 380
D LA GGR+ VISFHSLEDRIVKQT
Sbjct: 240 IDALAVGGRVVVISFHSLEDRIVKQTL 266
>gi|125973496|ref|YP_001037406.1| S-adenosyl-methyltransferase MraW [Clostridium thermocellum ATCC
27405]
gi|263446119|sp|A3DE34.1|RSMH_CLOTH RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|125713721|gb|ABN52213.1| S-adenosyl-methyltransferase MraW [Clostridium thermocellum ATCC
27405]
Length = 313
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 124/343 (36%), Positives = 178/343 (51%), Gaps = 40/343 (11%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H PV+L E + + + ++D T+G AGHS I++ E IG+D D A+ ++
Sbjct: 5 HKPVLLEETISNLAI-KPDGVYIDGTVGGAGHSGEILKRLDESGTLIGLDQDEFAIKTSQ 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L Q + K NF +IK V + NI VD IL+DLG+SS Q++
Sbjct: 64 EKLV-----QINSKAKIILVNTNFVNIKEVCQK--NNI--ESVDGILLDLGVSSHQLDEA 114
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
RGFS D PLDMRMD + L A+ I+N + E+ R++R+YGEE + IV+AR
Sbjct: 115 SRGFSYNKDAPLDMRMDRRGELTAKKIVNEYGREEIKRIIRDYGEEKWASRIAEFIVEAR 174
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +TGELVD+I++ P R+G A R FQALRIAVN+EL L ++ +
Sbjct: 175 KKKEIETTGELVDIIKAAIPS--SARRGGPHPAKRTFQALRIAVNNELGILAKTIEDGTE 232
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L PGGR +I+FHSLEDRIVK F + +N +
Sbjct: 233 LLKPGGRFCIITFHSLEDRIVKDEF----------------------NKKVNPCICPKQF 270
Query: 416 ------QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ G ++ ++PI P +E N R RSAKLRV++KI
Sbjct: 271 PVCTCGRKPEGVLVNRKPIVPKEKELEENPRARSAKLRVLEKI 313
>gi|404418410|ref|ZP_11000177.1| 16S rRNA m(4)C1402 methyltransferase [Staphylococcus arlettae
CVD059]
gi|403489003|gb|EJY94581.1| 16S rRNA m(4)C1402 methyltransferase [Staphylococcus arlettae
CVD059]
Length = 311
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 124/335 (37%), Positives = 176/335 (52%), Gaps = 30/335 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI VML E +D + + + +VDCTLG AGH+ ++ + I +D D +A+ A+
Sbjct: 4 HISVMLKETID-YLNIKEDGVYVDCTLGGAGHAQYLLNQLNDNGHLIAIDQDTTAIENAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L LH H NFR + +L ++ NI VD I DLG+SS Q++ P
Sbjct: 63 NVLKEHLHKVTFVH-------SNFRELSEILNEL--NI--EKVDGIYYDLGVSSPQLDVP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D LDMRMD L A +++N W E+ R+ YGEE + +I Q R
Sbjct: 112 ERGFSYHHDAKLDMRMDQTQELSAYEVVNEWKFEELVRIFHRYGEEKFAKQIARRIEQNR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +T ELV+ I+ P + RR+G A R+FQA+RIAVNDEL E SL +
Sbjct: 172 ELKPIETTLELVESIKEGIPA-KARRKGG-HPAKRIFQAIRIAVNDELAAFEDSLEQAIN 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
+ GR+ VI+FHSLEDR+ KQ F ++ E E R + I E + ++
Sbjct: 230 YVEVNGRISVITFHSLEDRLCKQMF--------QEYEKGPEVPRGL--PVIPEAYTPKL- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
K + ++PIT + E+ N R RSAKLRV +
Sbjct: 279 -----KRVNRKPITATDEDTDSNNRARSAKLRVAE 308
>gi|418061185|ref|ZP_12699060.1| Ribosomal RNA small subunit methyltransferase H [Methylobacterium
extorquens DSM 13060]
gi|373565253|gb|EHP91307.1| Ribosomal RNA small subunit methyltransferase H [Methylobacterium
extorquens DSM 13060]
Length = 353
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 124/340 (36%), Positives = 184/340 (54%), Gaps = 32/340 (9%)
Query: 112 QQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
+Q+ H+PV+L EVL S R + VD T GA G++ A++ A PE+++ I +D DP+A+
Sbjct: 18 EQARHVPVLLAEVLAALSLDRPGLA-VDGTFGAGGYTRALLEAGPEVRV-IAIDRDPTAI 75
Query: 172 AKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQ 231
+ A L + G + F + +++ DE + D I++D+G+SSMQ
Sbjct: 76 -RGGADLVTASGG------RLRLVQGRFGDLDTLIADQDE----AQADWIVLDIGVSSMQ 124
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ +RGFS DGPLDMRM + A D++N + + +L +GEE + I
Sbjct: 125 IDEAQRGFSFRQDGPLDMRMGGEGP-SAADLVNGEEETTLADILYHFGEERRSRAVARAI 183
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
V+AR R + +T +L DL+ V +R I ATR FQ LRIAVNDEL L LH
Sbjct: 184 VEARRRAPIETTAQLADLVAGV---VRPEPGSPIHPATRSFQGLRIAVNDELGELVRGLH 240
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
A L PGGRL V++FHSLEDRIVKQ F + + A+ + R++ +
Sbjct: 241 AAERVLKPGGRLAVVTFHSLEDRIVKQFFSA---RSGRAAQAS----RHV--PGVERPAP 291
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ K++TK P+ PS E +N R RSAKLR ++
Sbjct: 292 KSF------KLVTKGPVLPSEAETDVNPRSRSAKLRAGER 325
>gi|425056589|ref|ZP_18460040.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium 505]
gi|403031619|gb|EJY43219.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium 505]
Length = 319
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 130/340 (38%), Positives = 177/340 (52%), Gaps = 35/340 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHI-GVDVDPSALAKA 174
H VML E +D + + +VDCTLG AGHS ++ + K H+ D D A+ A
Sbjct: 7 HYTVMLKETVDGLNI-KPDGVYVDCTLGGAGHSEYLL-SQLSSKGHLYAFDQDQKAIDHA 64
Query: 175 RAHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
+ L S + G TF K NFR ++ L + + VD IL DLG+SS Q+
Sbjct: 65 KLRLASYVEQGMV-------TFIKANFRELEERLSEYVDK-----VDGILYDLGVSSPQL 112
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ ERGFS D PLDMRMD A L A ++N + E+ ++ YGEE + +I
Sbjct: 113 DEAERGFSYHQDAPLDMRMDQSAPLSAYHVINEYSYHELVKIFFRYGEEKFSKQIAREIE 172
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
+ R + +TGELV++I+ V P R+ G A R+FQA+RIAVNDEL E+SL
Sbjct: 173 RVRKTKPIQTTGELVEIIKQVIPAPARRKGGH--PAKRIFQAVRIAVNDELGAEEASLEQ 230
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
L GR+ VI+FHSLEDRIVK F +E ++D I
Sbjct: 231 AIRLLKVNGRISVITFHSLEDRIVKSMF---------------KEYSTVQDLPPGLPVIP 275
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
Q K++T++PI PS EE N R RSAKLR+ +KI
Sbjct: 276 DEFQP-ELKVITRKPILPSEEELAENNRSRSAKLRIAEKI 314
>gi|191638270|ref|YP_001987436.1| S-adenosyl-methyltransferase MraW [Lactobacillus casei BL23]
gi|239631645|ref|ZP_04674676.1| SAM-dependent methyltransferase for cell envelope biogenesis
[Lactobacillus paracasei subsp. paracasei 8700:2]
gi|301066319|ref|YP_003788342.1| SAM-dependent methyltransferase for cell envelope biogenesis
[Lactobacillus casei str. Zhang]
gi|385819975|ref|YP_005856362.1| Ribosomal RNA small subunit methyltransferase H [Lactobacillus
casei LC2W]
gi|385823170|ref|YP_005859512.1| Ribosomal RNA small subunit methyltransferase H [Lactobacillus
casei BD-II]
gi|417980565|ref|ZP_12621245.1| rRNA small subunit methyltransferase H [Lactobacillus casei 12A]
gi|263456244|sp|B3WDX7.1|RSMH_LACCB RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|190712572|emb|CAQ66578.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Lactobacillus casei BL23]
gi|239526110|gb|EEQ65111.1| SAM-dependent methyltransferase for cell envelope biogenesis
[Lactobacillus paracasei subsp. paracasei 8700:2]
gi|300438726|gb|ADK18492.1| SAM-dependent methyltransferase for cell envelope biogenesis
[Lactobacillus casei str. Zhang]
gi|327382302|gb|AEA53778.1| Ribosomal RNA small subunit methyltransferase H [Lactobacillus
casei LC2W]
gi|327385497|gb|AEA56971.1| Ribosomal RNA small subunit methyltransferase H [Lactobacillus
casei BD-II]
gi|410524888|gb|EKP99795.1| rRNA small subunit methyltransferase H [Lactobacillus casei 12A]
Length = 313
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 122/316 (38%), Positives = 171/316 (54%), Gaps = 30/316 (9%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
+VD TLG GH+ I+ +L I D D +A+A A +L H
Sbjct: 26 YVDATLGRGGHTRQILNQLTTGRL-IAFDQDEAAIATVTADFGTLPKQLTLVH------- 77
Query: 197 KNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQAS 256
+NFR + L + + VD IL DLG+SS Q ++ +RGFS D PLDMRMD + +
Sbjct: 78 RNFRDLTDALTTLG----ITEVDGILYDLGVSSPQFDDSKRGFSYRFDAPLDMRMDQRQT 133
Query: 257 LKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPG 316
L A+ I+N WP A++ R+ YGEE + +I QAR + +T +LV+LI++ P
Sbjct: 134 LDAKTIVNEWPYADLVRIFSRYGEEHFSKQIARRIEQARTVQPITTTFQLVELIKAGIPA 193
Query: 317 MRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIV 376
+ RR G A +VFQA+RIAVNDEL LESSL + GGR+ VI+F SLEDR+V
Sbjct: 194 -KARRTGG-HPAKKVFQAIRIAVNDELSALESSLEQALKLINVGGRISVITFQSLEDRLV 251
Query: 377 KQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEER 436
K F +E+ +++D I Q N +++ ++PI PS EE
Sbjct: 252 KTMF---------------KEVSSVQDVPRGLPVIPASAQP-NYRLVNRKPILPSEEELA 295
Query: 437 LNCRCRSAKLRVIQKI 452
+N R SAKLRVI+KI
Sbjct: 296 VNHRAHSAKLRVIEKI 311
>gi|110598571|ref|ZP_01386839.1| methyltransferase [Chlorobium ferrooxidans DSM 13031]
gi|110339805|gb|EAT58312.1| methyltransferase [Chlorobium ferrooxidans DSM 13031]
Length = 329
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 127/347 (36%), Positives = 179/347 (51%), Gaps = 36/347 (10%)
Query: 112 QQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRA-----HPELKLHIGVDV 166
Q + H+PV+ E++ + +VD TLG GHS AI+RA + E L IG+D
Sbjct: 3 QDTFHVPVLADEIVAFLVQKPGV--YVDGTLGGGGHSLAILRALEKAGYLESSLLIGIDQ 60
Query: 167 DPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQI-DENILRSGVDAILMDL 225
D +AL KA L + NF I V+ ++ E V IL+DL
Sbjct: 61 DDAALRKAEETLREF-------RTNSVLVKGNFEEISGVIQRVCSERERPRKVSGILLDL 113
Query: 226 GMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWH 285
G+SS Q+++ ERGFS L +GPLDMRMD A DI+N+ + E+ ++ YGEE
Sbjct: 114 GVSSFQIDSAERGFSYLRNGPLDMRMDSSGQRSAADIVNTCDERELAQIFYRYGEEPRSR 173
Query: 286 LLQNKIVQARLR-GGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELK 344
+ IV R + G + +T EL +I+++ G IKT +RVFQALRI VN EL
Sbjct: 174 AISRAIVGYRQKHGPISTTEELAGIIRAIAYGG----DNVIKTLSRVFQALRIEVNRELD 229
Query: 345 TLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDD 404
L +L + L GR+ VIS+HSLEDRIVK F D RED
Sbjct: 230 VLREALCDGIESLEDHGRMAVISYHSLEDRIVKTVF---ADSAREDW------------- 273
Query: 405 NINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+R+ ++ +++T++P+ S+ E N R RSAKLRVI+K
Sbjct: 274 GPKGVGLREPLKRGAIRLVTRKPLIASSGETASNSRARSAKLRVIEK 320
>gi|150016452|ref|YP_001308706.1| S-adenosyl-methyltransferase MraW [Clostridium beijerinckii NCIMB
8052]
gi|263446053|sp|A6LTS0.1|RSMH_CLOB8 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|149902917|gb|ABR33750.1| S-adenosyl-methyltransferase MraW [Clostridium beijerinckii NCIMB
8052]
Length = 310
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 121/342 (35%), Positives = 181/342 (52%), Gaps = 35/342 (10%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
+ H+ V+L E ++ + +VD TLG AGHSS I+ + + IG+D D AL
Sbjct: 2 EFKHVSVLLNECIEALNIKEN-GIYVDGTLGGAGHSSHILSNLSKDGMLIGIDQDQDALK 60
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
A+ L + + H+ NF +I S+L +D VD ILMDLG+SS Q+
Sbjct: 61 AAKEKLKDFENVKY-----VHS---NFYNIDSILNDLD----IEKVDGILMDLGVSSYQL 108
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ RGFS + D PLDMRM+ + A +I+N++ + + +++++YGEE + N I+
Sbjct: 109 DEASRGFSYMKDAPLDMRMNRENDFSAYNIVNNYDEDSLYKIIKDYGEERFAKRIANFII 168
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
R+ + +T ELVD+I++ P + RR+G A R FQA+RI VN ELK L ++
Sbjct: 169 NRRIEKPIETTFELVDIIKAAIPA-KMRREGP-HPAKRTFQAIRIEVNSELKILNKTIED 226
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
+ L GGR+ +I+FHSLEDRIVK F R + +
Sbjct: 227 GVNRLNKGGRMAIITFHSLEDRIVKLKF------------------RELENPCTCPKEFP 268
Query: 413 QIIQGWNG--KILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
I G + K + K+ I P+ EE N R RSAKLRVI+K+
Sbjct: 269 MCICGKSPLVKNIAKKGIAPTKEEIEENPRSRSAKLRVIEKL 310
>gi|332982167|ref|YP_004463608.1| S-adenosyl-methyltransferase MraW [Mahella australiensis 50-1 BON]
gi|332699845|gb|AEE96786.1| S-adenosyl-methyltransferase MraW [Mahella australiensis 50-1 BON]
Length = 312
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 122/339 (35%), Positives = 181/339 (53%), Gaps = 34/339 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H PV++ EV+ + S R ++D T+G GH+ I R L IG+D D ALA A
Sbjct: 6 HKPVLVEEVMQ-YMSCRKGGIYIDGTIGGGGHALEICRRIDGDGLLIGIDKDDEALAHAA 64
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L +FR++K+++ I+ N VD +L+DLG+SS Q+++
Sbjct: 65 ETLKEYSSC-------VRLIKGDFRYMKALVNGIEVN----EVDGVLLDLGVSSHQLDDA 113
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
RGFS + LDMRMD Q L A+D++N++ + + ++++YGEE + + IV+ R
Sbjct: 114 GRGFSYNAEAVLDMRMDKQQLLTAKDVVNTYDEKRLYEIIKDYGEERWAKRIASFIVKER 173
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
R + +TG+LV++I+ P RR+G A R FQA+RI VNDEL +++ L D
Sbjct: 174 QRYPIETTGQLVEVIKRAIPAA-ARREGP-HPARRTFQAIRIEVNDELNSIKEGLIQAMD 231
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
CL PGGRL VISFHSLEDR+VK TF R ++ +
Sbjct: 232 CLKPGGRLCVISFHSLEDRLVKDTF------------------RRWQNPCTCPPDTPLCV 273
Query: 416 QGWN--GKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
G I+TK+P+ + +E N R RSAKLRV +K+
Sbjct: 274 CGNKPVAAIVTKKPVIATPDEVESNPRARSAKLRVCEKL 312
>gi|430840715|ref|ZP_19458638.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1007]
gi|430494921|gb|ELA71139.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1007]
Length = 319
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 130/340 (38%), Positives = 177/340 (52%), Gaps = 35/340 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHI-GVDVDPSALAKA 174
H VML E +D + + +VDCTLG AGHS ++ + K H+ D D A+ A
Sbjct: 7 HYTVMLKETVDGLNI-KPDGVYVDCTLGGAGHSEYLL-SQLSSKGHLYAFDQDQKAIDYA 64
Query: 175 RAHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
+ L S + G TF K NFR ++ L + + VD IL DLG+SS Q+
Sbjct: 65 KLRLASYVEQGMV-------TFIKANFRELEERLSEYVDK-----VDGILYDLGVSSPQL 112
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ ERGFS D PLDMRMD A L A ++N + E+ ++ YGEE + +I
Sbjct: 113 DEAERGFSYHQDAPLDMRMDQSAPLTAYHVINEYSYHELVKIFFRYGEEKFSKQIAREIE 172
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
+ R + +TGELV++I+ V P R+ G A R+FQA+RIAVNDEL E+SL
Sbjct: 173 RVRKTKPIQTTGELVEIIKQVIPAPARRKGGH--PAKRIFQAVRIAVNDELGAEEASLEQ 230
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
L GR+ VI+FHSLEDRIVK F +E ++D I
Sbjct: 231 AIRLLKVNGRISVITFHSLEDRIVKSMF---------------KEYSTVQDLPPGLPVIP 275
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
Q K++T++PI PS EE N R RSAKLR+ +KI
Sbjct: 276 DEFQP-ELKVITRKPILPSEEELAENNRSRSAKLRIAEKI 314
>gi|333896887|ref|YP_004470761.1| ribosomal RNA small subunit methyltransferase H
[Thermoanaerobacterium xylanolyticum LX-11]
gi|333112152|gb|AEF17089.1| Ribosomal RNA small subunit methyltransferase H
[Thermoanaerobacterium xylanolyticum LX-11]
Length = 310
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 122/351 (34%), Positives = 189/351 (53%), Gaps = 44/351 (12%)
Query: 102 DYDYESIIQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLH 161
D+ +ES++ Q+ ++ + + +VD TLG GHS I+R + KL
Sbjct: 2 DFKHESVLLQETIEYLEIKPDGI------------YVDGTLGGGGHSYEILRRLDKGKL- 48
Query: 162 IGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAI 221
I +D D A+ A L + T N+++IK +L + +D
Sbjct: 49 IAIDRDMDAIKAASIRLKDFNN--------TTYIHDNYKNIKDILKKCG----IESIDGA 96
Query: 222 LMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEE 281
L+DLG+SS Q++ +RGFS + D PLDMRMD ++ + AE ++N++ + E+ +V+ +YGEE
Sbjct: 97 LLDLGVSSYQLDEAQRGFSYMHDAPLDMRMDKESDITAEYVVNNYSEDEIAKVISDYGEE 156
Query: 282 SNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVND 341
+ IV+ R R + +T ELVD+I+ P + RR G A R FQA+RI VN+
Sbjct: 157 LWAKRIAKFIVEERRRKPIKTTFELVDIIKKAIPASK-RRTGP-HPAKRTFQAIRIEVNE 214
Query: 342 ELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNI 401
ELK L ++ D + PGGR+ +I+FHSLEDRIVK + + ED +
Sbjct: 215 ELKGLGDAIADFVDVMNPGGRIAIITFHSLEDRIVKNAYKKL-----EDPCTCPK----- 264
Query: 402 RDDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
N+ T ++ + KI+TK+PI PS E ++N R RSAKLRV +K+
Sbjct: 265 ---NLPCTCGKKPVI----KIITKKPIVPSEVEIKVNPRSRSAKLRVAEKL 308
>gi|406909181|gb|EKD49487.1| hypothetical protein ACD_63C00125G0005 [uncultured bacterium]
Length = 308
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 129/347 (37%), Positives = 180/347 (51%), Gaps = 50/347 (14%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRA-HPELKLHIGVDVDPSALAKA 174
HI V+ E L S + +DCT+G+ GH+ ++ A PE KL +G+D D AL +
Sbjct: 2 HISVLSNEALKYLKLSSN-DNVIDCTVGSGGHAIMMLEAISPEGKL-LGIDRDEKALELS 59
Query: 175 RAHLNS------LLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG---VDAILMDL 225
R +L L+HG+ G +DE +L++ + IL+D+
Sbjct: 60 RVNLKKFENRTILIHGR--------------------FGDLDELVLKNNFKKISGILLDI 99
Query: 226 GMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWH 285
GMSSMQ+ RGFS LDMRMD L A DI+NS ++ ++ REYGEES
Sbjct: 100 GMSSMQLGETGRGFSFKKAEYLDMRMDQSGGLTAADIVNSSSKVDLEKIFREYGEESFSK 159
Query: 286 LLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKT 345
+ IV+ R + + +T EL DL+ V P RG G I AT+VFQALRIAVNDEL
Sbjct: 160 KIARAIVERREKQNVETTNELADLVCEVVP--RGFHAGKIHPATKVFQALRIAVNDELNE 217
Query: 346 LESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDN 405
L+ L L GGR+ VISFHS+EDRIVK F + E +N +
Sbjct: 218 LKKVLPKALTLLDRGGRMVVISFHSIEDRIVKDFF--------------KLEKKNCICPD 263
Query: 406 INETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ I + +I+T++P+ P+ +E N R RSAKLR ++KI
Sbjct: 264 V--LPICRCNHRSRVRIITRKPVVPAPDEIVKNPRSRSAKLRCVEKI 308
>gi|333371340|ref|ZP_08463292.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Desmospora sp. 8437]
gi|332976270|gb|EGK13132.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Desmospora sp. 8437]
Length = 317
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 123/317 (38%), Positives = 163/317 (51%), Gaps = 33/317 (10%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
+VDCTLG AGHS I + + IG+D D AL A L + H
Sbjct: 24 YVDCTLGGAGHSLLIAERLGKDGILIGLDQDDRALQAASDRLKGA-------DCQVHLIK 76
Query: 197 KNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQAS 256
NFR ++ VLG++ + VD +L D+G+SS Q++ ERGFS D PLDMRMDP
Sbjct: 77 SNFRRLEEVLGRLGLD----RVDGVLFDIGVSSPQLDEGERGFSYQHDAPLDMRMDPDGE 132
Query: 257 LKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPG 316
L A D++N W + E+ +L YGEE + KIV+ R + + +TGEL +I+ P
Sbjct: 133 LTARDVVNDWSEEEIAHILFRYGEEKFSRRIARKIVETRSQYPIETTGELAAVIKEGIPA 192
Query: 317 MRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIV 376
RR+G A R FQA+RIAVNDEL E L L GGR+ VI+FHSLEDRI
Sbjct: 193 P-ARRKGP-HPARRSFQAIRIAVNDELNAFEEGLEQAVRSLNSGGRVSVITFHSLEDRIC 250
Query: 377 KQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNG--KILTKRPITPSAEE 434
K+ F +E A G I G +I+TK+ + PSA E
Sbjct: 251 KRFF-------QEKARG-----------CICPPDFPVCTCGKTPELRIITKKSLQPSAAE 292
Query: 435 ERLNCRCRSAKLRVIQK 451
N R RSA+LR+ +K
Sbjct: 293 TGRNPRARSARLRIAEK 309
>gi|257899142|ref|ZP_05678795.1| methyltransferase [Enterococcus faecium Com15]
gi|293571737|ref|ZP_06682756.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium E980]
gi|431066276|ref|ZP_19493899.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1604]
gi|431099320|ref|ZP_19496486.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1613]
gi|431594941|ref|ZP_19522047.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1861]
gi|431738293|ref|ZP_19527238.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1972]
gi|431741894|ref|ZP_19530794.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E2039]
gi|257837054|gb|EEV62128.1| methyltransferase [Enterococcus faecium Com15]
gi|291608194|gb|EFF37497.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium E980]
gi|430568315|gb|ELB07363.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1604]
gi|430570821|gb|ELB09760.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1613]
gi|430590867|gb|ELB28913.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1861]
gi|430597731|gb|ELB35514.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1972]
gi|430601047|gb|ELB38669.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E2039]
Length = 319
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 130/340 (38%), Positives = 177/340 (52%), Gaps = 35/340 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHI-GVDVDPSALAKA 174
H VML E +D + + +VDCTLG AGHS ++ + K H+ D D A+ A
Sbjct: 7 HYTVMLKETVDGLNI-KPDGVYVDCTLGGAGHSEYLL-SQLSSKGHLYAFDQDQKAIDHA 64
Query: 175 RAHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
+ L S + G TF K NFR ++ L + + VD IL DLG+SS Q+
Sbjct: 65 KLRLASYVEQGMV-------TFIKANFRELEERLSEYVDK-----VDGILYDLGVSSPQL 112
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ ERGFS D PLDMRMD A L A ++N + E+ ++ YGEE + +I
Sbjct: 113 DEAERGFSYHQDAPLDMRMDQSAPLTAYHVINEYSYHELVKIFFRYGEEKFSKQIAREIE 172
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
+ R + +TGELV++I+ V P R+ G A R+FQA+RIAVNDEL E+SL
Sbjct: 173 RVRKTKPIQTTGELVEIIKQVIPAPARRKGGH--PAKRIFQAVRIAVNDELGAEEASLEQ 230
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
L GR+ VI+FHSLEDRIVK F +E ++D I
Sbjct: 231 AIRLLKVNGRISVITFHSLEDRIVKSMF---------------KEYSTVQDLPPGLPVIP 275
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
Q K++T++PI PS EE N R RSAKLR+ +KI
Sbjct: 276 DEFQP-ELKVITRKPILPSEEELAENNRSRSAKLRIAEKI 314
>gi|240141491|ref|YP_002965971.1| S-adenosyl-dependent methyltransferase [Methylobacterium extorquens
AM1]
gi|263456428|sp|C5ATZ5.1|RSMH_METEA RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|240011468|gb|ACS42694.1| S-adenosyl-dependent methyltransferase [Methylobacterium extorquens
AM1]
Length = 351
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 124/340 (36%), Positives = 184/340 (54%), Gaps = 32/340 (9%)
Query: 112 QQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
+Q+ H+PV+L EVL S R + VD T GA G++ A++ A PE+++ I +D DP+A+
Sbjct: 16 EQARHVPVLLAEVLAALSLDRPGLA-VDGTFGAGGYTRALLEAGPEVRV-IAIDRDPTAI 73
Query: 172 AKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQ 231
+ A L + G + F + +++ DE + D I++D+G+SSMQ
Sbjct: 74 -RGGADLVTASGG------RLRLVQGRFGDLDTLIADQDE----AQADWIVLDIGVSSMQ 122
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ +RGFS DGPLDMRM + A D++N + + +L +GEE + I
Sbjct: 123 IDEAQRGFSFRQDGPLDMRMGGEGP-SAADLVNGEEETTLADILYHFGEERRSRAVARAI 181
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
V+AR R + +T +L DL+ V +R I ATR FQ LRIAVNDEL L LH
Sbjct: 182 VEARRRAPIETTAQLADLVAGV---VRPEPGSPIHPATRSFQGLRIAVNDELGELVRGLH 238
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
A L PGGRL V++FHSLEDRIVKQ F + + A+ + R++ +
Sbjct: 239 AAERVLKPGGRLAVVTFHSLEDRIVKQFFSA---RSGRAAQAS----RHV--PGVERPAP 289
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ K++TK P+ PS E +N R RSAKLR ++
Sbjct: 290 KSF------KLVTKGPVLPSEAETDVNPRSRSAKLRAGER 323
>gi|417998973|ref|ZP_12639186.1| rRNA small subunit methyltransferase H [Lactobacillus casei T71499]
gi|410539913|gb|EKQ14435.1| rRNA small subunit methyltransferase H [Lactobacillus casei T71499]
Length = 313
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 122/316 (38%), Positives = 171/316 (54%), Gaps = 30/316 (9%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
+VD TLG GH+ I+ +L I D D +A+A A +L H
Sbjct: 26 YVDATLGRGGHTRQILNQLTTGRL-IAFDQDEAAIATVTADFGTLPKQLTLVH------- 77
Query: 197 KNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQAS 256
+NFR + L + + VD IL DLG+SS Q ++ +RGFS D PLDMRMD + +
Sbjct: 78 RNFRDLTDALTTLG----ITEVDGILYDLGVSSPQFDDSKRGFSYRFDAPLDMRMDQRQT 133
Query: 257 LKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPG 316
L A+ I+N WP A++ R+ YGEE + +I QAR + +T +LV+LI++ P
Sbjct: 134 LDAKTIVNEWPYADLVRIFSRYGEEHFSKQIARRIEQARTVQPITTTFQLVELIKAGIPA 193
Query: 317 MRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIV 376
+ RR G A +VFQA+RIAVNDEL LESSL + GGR+ VI+F SLEDR+V
Sbjct: 194 -KARRTGG-HPAKKVFQAIRIAVNDELSALESSLEQALKLINVGGRVSVITFQSLEDRLV 251
Query: 377 KQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEER 436
K F +E+ +++D I Q N +++ ++PI PS EE
Sbjct: 252 KTMF---------------KEVSSVQDVPRGLPVIPASAQP-NYRLVNRKPILPSEEELA 295
Query: 437 LNCRCRSAKLRVIQKI 452
+N R SAKLRVI+KI
Sbjct: 296 VNHRAHSAKLRVIEKI 311
>gi|423332899|ref|ZP_17310681.1| conserved hypothetical protein [Lactobacillus reuteri ATCC 53608]
gi|337728017|emb|CCC03106.1| conserved hypothetical protein [Lactobacillus reuteri ATCC 53608]
Length = 318
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 128/339 (37%), Positives = 178/339 (52%), Gaps = 32/339 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E + + T T +VD TLG GH+ AI++ + L+ D D +A+ +
Sbjct: 6 HVTVLLKEAVAGLNVQPTGT-YVDATLGGGGHTQAILQQLVDGHLY-SFDQDQTAIDYNK 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
HL + + Q K NFR+IK+ L N+ R V+ IL DLG+SS Q ++
Sbjct: 64 EHLKTAIEQQ-----KLTLVEDNFRNIKTELNSY--NVKR--VNGILYDLGVSSPQFDDA 114
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
+RGFS D PLDMRM+ + L A +++N WP + ++L YGEE + KI Q R
Sbjct: 115 KRGFSYQHDAPLDMRMNQEQKLSAMEVVNEWPYERLVKILYRYGEEKFAKSIARKIEQRR 174
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +T ELVD+I+ P RR G A + FQA+RIAVNDEL LE SL D
Sbjct: 175 KIAPIKTTFELVDVIKEGIPAA-ARRHGG-HPAKKSFQAIRIAVNDELGALEESLEQALD 232
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L GGR+ VI+F SLEDR+VK F + + +G + I
Sbjct: 233 LLDVGGRISVITFQSLEDRLVKTMFREKTSLSGDVPQG-----------------LPVIP 275
Query: 416 QGW--NGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
G N K++ K+PI S EE N R SAKLR+I+KI
Sbjct: 276 AGMEPNFKLINKKPIVASDEELAANHRAHSAKLRIIEKI 314
>gi|379022786|ref|YP_005299447.1| 16S rRNA m(4)C1402 methyltransferase [Rickettsia canadensis str.
CA410]
gi|376323724|gb|AFB20965.1| 16S rRNA m(4)C1402 methyltransferase [Rickettsia canadensis str.
CA410]
Length = 308
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 123/343 (35%), Positives = 187/343 (54%), Gaps = 42/343 (12%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHI-GVDVDPSAL 171
Q SHIPVML E+L + S++DCT GA G+S AI+ + ++ +D DP+ +
Sbjct: 2 QQSHIPVMLNEMLANLAPQDG-KSYLDCTFGAGGYSKAILES---CNCYVTALDRDPNVI 57
Query: 172 AKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQ 231
RA + + ++T+ FA +F +K D I++DLG+SSMQ
Sbjct: 58 K--RAEIIKQNYSTRFDFIETN-FADSFAKLKE-----------KKFDGIVLDLGVSSMQ 103
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ +RGFS L D PLDMRM Q L AE+ +N+ + E+ ++ +YG+ES + +I
Sbjct: 104 LDIADRGFSFLHDSPLDMRMSGQG-LSAEEFINTVEEKELADIIYKYGDESFSRRIAKRI 162
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
V+ R ++STG+L +++++ G R+G I AT+ FQA+RI +NDEL+ LE L
Sbjct: 163 VEYRKTARINSTGKLAEIVRNSI----GFRKGKIDPATKTFQAIRIYINDELRELERFLA 218
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE--T 409
L GRL ++SFHSLEDRIVK F +E++E + +DD + +
Sbjct: 219 NVQSILNKDGRLVIVSFHSLEDRIVKHFF-------KENSEKPVARSKYSKDDPVIDPNK 271
Query: 410 WIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
W+ KI+T + PS +E LN R RSAKLR + I
Sbjct: 272 WL---------KIITNKAEAPSDKEVELNVRARSAKLRAAKAI 305
>gi|69244718|ref|ZP_00602982.1| methyltransferase [Enterococcus faecium DO]
gi|257879362|ref|ZP_05659015.1| methyltransferase [Enterococcus faecium 1,230,933]
gi|257881772|ref|ZP_05661425.1| methyltransferase [Enterococcus faecium 1,231,502]
gi|257890188|ref|ZP_05669841.1| methyltransferase [Enterococcus faecium 1,231,410]
gi|257893516|ref|ZP_05673169.1| methyltransferase [Enterococcus faecium 1,231,408]
gi|260558804|ref|ZP_05830993.1| methyltransferase [Enterococcus faecium C68]
gi|293553181|ref|ZP_06673818.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium E1039]
gi|293560478|ref|ZP_06676970.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium E1162]
gi|293568304|ref|ZP_06679628.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium E1071]
gi|294621599|ref|ZP_06700764.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium U0317]
gi|314937875|ref|ZP_07845191.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium TX0133a04]
gi|314941366|ref|ZP_07848259.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium TX0133C]
gi|314950125|ref|ZP_07853411.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium TX0082]
gi|314951334|ref|ZP_07854388.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium TX0133A]
gi|314992835|ref|ZP_07858236.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium TX0133B]
gi|314997995|ref|ZP_07862890.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium TX0133a01]
gi|383328082|ref|YP_005353966.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium Aus0004]
gi|389867972|ref|YP_006375395.1| S-adenosyl-methyltransferase [Enterococcus faecium DO]
gi|406580462|ref|ZP_11055655.1| 16S rRNA m(4)C1402 methyltransferase [Enterococcus sp. GMD4E]
gi|406582703|ref|ZP_11057801.1| 16S rRNA m(4)C1402 methyltransferase [Enterococcus sp. GMD3E]
gi|406584954|ref|ZP_11059950.1| 16S rRNA m(4)C1402 methyltransferase [Enterococcus sp. GMD2E]
gi|406590337|ref|ZP_11064706.1| 16S rRNA m(4)C1402 methyltransferase [Enterococcus sp. GMD1E]
gi|410937014|ref|ZP_11368876.1| 16S rRNA m(4)C1402 methyltransferase [Enterococcus sp. GMD5E]
gi|415898405|ref|ZP_11551290.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium E4453]
gi|416130940|ref|ZP_11597603.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium E4452]
gi|424809982|ref|ZP_18235350.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium S447]
gi|424826030|ref|ZP_18250971.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium R501]
gi|424859445|ref|ZP_18283453.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium R499]
gi|424951716|ref|ZP_18366784.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium R496]
gi|424958650|ref|ZP_18373286.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium R446]
gi|424959589|ref|ZP_18374167.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium P1986]
gi|424969205|ref|ZP_18382788.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium P1140]
gi|424971975|ref|ZP_18385372.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium P1139]
gi|424973319|ref|ZP_18386607.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium P1137]
gi|424977767|ref|ZP_18390752.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium P1123]
gi|424982070|ref|ZP_18394753.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium ERV99]
gi|424985827|ref|ZP_18398287.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium ERV69]
gi|424988390|ref|ZP_18400712.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium ERV38]
gi|424990617|ref|ZP_18402823.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium ERV26]
gi|424994846|ref|ZP_18406765.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium ERV168]
gi|424998831|ref|ZP_18410494.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium ERV165]
gi|425002651|ref|ZP_18414071.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium ERV161]
gi|425004796|ref|ZP_18416081.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium ERV102]
gi|425007867|ref|ZP_18418982.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium ERV1]
gi|425009751|ref|ZP_18420745.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium E422]
gi|425014524|ref|ZP_18425198.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium E417]
gi|425019168|ref|ZP_18429554.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium C621]
gi|425019577|ref|ZP_18429925.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium C497]
gi|425023864|ref|ZP_18433959.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium C1904]
gi|425031140|ref|ZP_18436283.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium 515]
gi|425036616|ref|ZP_18441358.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium 514]
gi|425043096|ref|ZP_18447365.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium 511]
gi|425046449|ref|ZP_18450465.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium 510]
gi|425048702|ref|ZP_18452593.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium 509]
gi|425052471|ref|ZP_18456076.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium 506]
gi|427395417|ref|ZP_18888339.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
durans FB129-CNAB-4]
gi|430831529|ref|ZP_19449580.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E0333]
gi|430837042|ref|ZP_19455018.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E0680]
gi|430844784|ref|ZP_19462681.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1050]
gi|430846880|ref|ZP_19464734.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1133]
gi|430856767|ref|ZP_19474451.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1392]
gi|430862421|ref|ZP_19479738.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1573]
gi|430963183|ref|ZP_19487475.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1576]
gi|431011101|ref|ZP_19489845.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1578]
gi|431237094|ref|ZP_19503237.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1622]
gi|431264029|ref|ZP_19505917.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1623]
gi|431290529|ref|ZP_19506664.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1626]
gi|431382773|ref|ZP_19511366.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1627]
gi|431523797|ref|ZP_19516822.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1634]
gi|431536438|ref|ZP_19517398.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1731]
gi|431747884|ref|ZP_19536648.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E2297]
gi|431754089|ref|ZP_19542754.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E2883]
gi|431768775|ref|ZP_19557208.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1321]
gi|431777040|ref|ZP_19565297.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E2560]
gi|431779306|ref|ZP_19567501.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E4389]
gi|431781347|ref|ZP_19569495.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E6012]
gi|431784978|ref|ZP_19573013.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E6045]
gi|447913364|ref|YP_007394776.1| rRNA small subunit methyltransferase H [Enterococcus faecium NRRL
B-2354]
gi|68196309|gb|EAN10738.1| methyltransferase [Enterococcus faecium DO]
gi|257813590|gb|EEV42348.1| methyltransferase [Enterococcus faecium 1,230,933]
gi|257817430|gb|EEV44758.1| methyltransferase [Enterococcus faecium 1,231,502]
gi|257826548|gb|EEV53174.1| methyltransferase [Enterococcus faecium 1,231,410]
gi|257829895|gb|EEV56502.1| methyltransferase [Enterococcus faecium 1,231,408]
gi|260075263|gb|EEW63576.1| methyltransferase [Enterococcus faecium C68]
gi|291589016|gb|EFF20840.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium E1071]
gi|291598764|gb|EFF29816.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium U0317]
gi|291602591|gb|EFF32806.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium E1039]
gi|291605626|gb|EFF35068.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium E1162]
gi|313588007|gb|EFR66852.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium TX0133a01]
gi|313592639|gb|EFR71484.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium TX0133B]
gi|313596551|gb|EFR75396.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium TX0133A]
gi|313599789|gb|EFR78632.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium TX0133C]
gi|313642733|gb|EFS07313.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium TX0133a04]
gi|313643566|gb|EFS08146.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium TX0082]
gi|364090073|gb|EHM32704.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium E4453]
gi|364093815|gb|EHM36051.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium E4452]
gi|378937776|gb|AFC62848.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium Aus0004]
gi|388533221|gb|AFK58413.1| S-adenosyl-methyltransferase [Enterococcus faecium DO]
gi|402918215|gb|EJX38929.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium S447]
gi|402924699|gb|EJX44891.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium R501]
gi|402926477|gb|EJX46513.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium R499]
gi|402928937|gb|EJX48743.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium R496]
gi|402939547|gb|EJX58452.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium R446]
gi|402949161|gb|EJX67242.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium P1140]
gi|402950103|gb|EJX68118.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium P1986]
gi|402956914|gb|EJX74337.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium P1139]
gi|402958955|gb|EJX76236.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium P1137]
gi|402961826|gb|EJX78821.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium ERV99]
gi|402964509|gb|EJX81283.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium P1123]
gi|402965078|gb|EJX81816.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium ERV69]
gi|402972089|gb|EJX88314.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium ERV38]
gi|402978944|gb|EJX94645.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium ERV168]
gi|402979105|gb|EJX94792.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium ERV26]
gi|402981868|gb|EJX97375.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium ERV165]
gi|402982834|gb|EJX98271.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium ERV161]
gi|402988441|gb|EJY03448.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium ERV102]
gi|402994292|gb|EJY08835.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium ERV1]
gi|402998591|gb|EJY12840.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium E417]
gi|402999213|gb|EJY13415.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium C621]
gi|403002005|gb|EJY16018.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium E422]
gi|403008472|gb|EJY21976.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium C1904]
gi|403011128|gb|EJY24457.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium C497]
gi|403014157|gb|EJY27175.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium 514]
gi|403016309|gb|EJY29133.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium 515]
gi|403021335|gb|EJY33802.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium 511]
gi|403024312|gb|EJY36482.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium 510]
gi|403030017|gb|EJY41737.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium 509]
gi|403034263|gb|EJY45726.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium 506]
gi|404453839|gb|EKA00871.1| 16S rRNA m(4)C1402 methyltransferase [Enterococcus sp. GMD4E]
gi|404457693|gb|EKA04223.1| 16S rRNA m(4)C1402 methyltransferase [Enterococcus sp. GMD3E]
gi|404463173|gb|EKA08869.1| 16S rRNA m(4)C1402 methyltransferase [Enterococcus sp. GMD2E]
gi|404469406|gb|EKA14212.1| 16S rRNA m(4)C1402 methyltransferase [Enterococcus sp. GMD1E]
gi|410734607|gb|EKQ76526.1| 16S rRNA m(4)C1402 methyltransferase [Enterococcus sp. GMD5E]
gi|425723917|gb|EKU86803.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
durans FB129-CNAB-4]
gi|430481412|gb|ELA58568.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E0333]
gi|430487823|gb|ELA64531.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E0680]
gi|430496215|gb|ELA72320.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1050]
gi|430538434|gb|ELA78726.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1133]
gi|430543880|gb|ELA83932.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1392]
gi|430548999|gb|ELA88846.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1573]
gi|430555608|gb|ELA95145.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1576]
gi|430560123|gb|ELA99429.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1578]
gi|430572658|gb|ELB11508.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1622]
gi|430576465|gb|ELB15116.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1623]
gi|430581144|gb|ELB19591.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1627]
gi|430582629|gb|ELB21051.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1626]
gi|430584755|gb|ELB23069.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1634]
gi|430594925|gb|ELB32877.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1731]
gi|430614760|gb|ELB51731.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E2297]
gi|430620012|gb|ELB56815.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E2883]
gi|430628643|gb|ELB65077.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1321]
gi|430639981|gb|ELB75835.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E2560]
gi|430642161|gb|ELB77942.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E4389]
gi|430648534|gb|ELB83940.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E6045]
gi|430649708|gb|ELB85076.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E6012]
gi|445189073|gb|AGE30715.1| rRNA small subunit methyltransferase H [Enterococcus faecium NRRL
B-2354]
Length = 319
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 131/341 (38%), Positives = 179/341 (52%), Gaps = 37/341 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHI-GVDVDPSALAKA 174
H VML E +D + + +VDCTLG AGHS ++ + K H+ D D A+ A
Sbjct: 7 HYTVMLKETVDGLNI-KPDGVYVDCTLGGAGHSEYLL-SQLSSKGHLYAFDQDQKAIDHA 64
Query: 175 RAHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQ-IDENILRSGVDAILMDLGMSSMQ 231
+ L S + G TF K NFR ++ L + +D+ VD IL DLG+SS Q
Sbjct: 65 KLRLASYVEQGMV-------TFIKANFRELEERLSEHVDK------VDGILYDLGVSSPQ 111
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ ERGFS D PLDMRMD A L A ++N + E+ ++ YGEE + +I
Sbjct: 112 LDEAERGFSYHQDAPLDMRMDQSAPLSAYHVINEYSYHELVKIFFRYGEEKFSKQIAREI 171
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
+ R + +TGELV++I+ V P R+ G A R+FQA+RIAVNDEL E+SL
Sbjct: 172 ERVRKTKPIQTTGELVEIIKQVIPAPARRKGGH--PAKRIFQAVRIAVNDELGAEEASLE 229
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
L GR+ VI+FHSLEDRIVK F +E ++D I
Sbjct: 230 QAIRLLKVNGRISVITFHSLEDRIVKSMF---------------KEYSTVQDLPPGLPVI 274
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
Q K++T++PI PS EE N R RSAKLR+ +KI
Sbjct: 275 PDEFQP-ELKVITRKPILPSEEELTENNRSRSAKLRIAEKI 314
>gi|85858517|ref|YP_460719.1| S-adenosyl-methyltransferase mraW [Syntrophus aciditrophicus SB]
gi|123515897|sp|Q2LR39.1|RSMH_SYNAS RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|85721608|gb|ABC76551.1| S-adenosyl-methyltransferase mraW [Syntrophus aciditrophicus SB]
Length = 315
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/345 (36%), Positives = 184/345 (53%), Gaps = 34/345 (9%)
Query: 110 QQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAII-RAHPELKLHIGVDVDP 168
+ + S H PV+L E + + R +VD T+G GH++ I+ R+ P+ L +G+DVD
Sbjct: 3 EGKYSYHEPVLLEEAIASLNC-RGGGIYVDGTVGGGGHAALILERSAPDGFL-LGMDVDG 60
Query: 169 SALAKARAHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGM 227
AL A L P + T K N+ ++ VL D IL+ VD IL+DLG+
Sbjct: 61 DALQAAEKRL--------MPFGRRKTLVKANYADMRKVLA--DLKILQ--VDGILLDLGV 108
Query: 228 SSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLL 287
SS Q++ ERGFS+L D PLDMRMD +A A D++N+ + E+ ++R+YGEE +
Sbjct: 109 SSHQLDAAERGFSLLKDAPLDMRMDSEAGRSAYDVVNTCSERELKDIIRKYGEEIMAGRI 168
Query: 288 QNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLE 347
I + R + ST +L ++ PG G R I ATR FQALRI +N+EL L
Sbjct: 169 ARAIAEKRKDTPIKSTTQLAAIVAGALPG--GFRHKKIHPATRTFQALRIYINNELSNLH 226
Query: 348 SSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNIN 407
++ DCL PGGR +ISFHSLED +VK F S+ E+ D +
Sbjct: 227 RAIFDSTDCLKPGGRFSIISFHSLEDSLVKNGFRSL-----------EKGCICPADMPVC 275
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
Q K++T++PI+P +E N R RSA+LR ++I
Sbjct: 276 ACG-----QSPRLKVITRKPISPCRDEVEANPRSRSARLRTAERI 315
>gi|402301142|ref|ZP_10820543.1| S-adenosyl-methyltransferase MraW [Bacillus alcalophilus ATCC
27647]
gi|401723747|gb|EJS97182.1| S-adenosyl-methyltransferase MraW [Bacillus alcalophilus ATCC
27647]
Length = 310
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/340 (37%), Positives = 178/340 (52%), Gaps = 36/340 (10%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
+H+ V+L E +D + R +VDCTLG GHS I++ E D D ALA
Sbjct: 3 THVTVLLKESVDSLNI-RPDGVYVDCTLGRGGHSELIVQQLNEDGHLYAFDQDDEALA-- 59
Query: 175 RAHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
+ + + T K NFR+IK L + I + VD IL DLG+SS Q++
Sbjct: 60 ------FVEDKFKDYKGRFTLIKSNFRYIKEELNE--RGITK--VDGILFDLGVSSPQLD 109
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
+ RGFS D LDMRMD A L A +++N W ++ +++ YGEE + KI
Sbjct: 110 DATRGFSYHQDARLDMRMDQSAPLSAFEVVNEWEFGQLAKIITRYGEEKFAKQIARKIEA 169
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
R + + +TGELVD+I+ P RR G A R FQA+RIAVNDEL E +L
Sbjct: 170 YRAKKEIETTGELVDIIKDAIPAP-ARRTGG-HPAKRTFQAIRIAVNDELGAFEDALEDS 227
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
+ L GGR+ VI+FHSLEDR+ K+ F +E ++G + +
Sbjct: 228 IELLNKGGRVAVITFHSLEDRLCKEVF-------KEKSKGPD-----------LPPGLPI 269
Query: 414 IIQGWNG--KILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
I +G+ K++T++PI PS EE N R RSAKLRV +K
Sbjct: 270 IPEGFEAPLKLVTRKPIVPSEEELIDNNRSRSAKLRVAEK 309
>gi|409997133|ref|YP_006751534.1| ribosomal RNA small subunit methyltransferase H [Lactobacillus
casei W56]
gi|406358145|emb|CCK22415.1| Ribosomal RNA small subunit methyltransferase H [Lactobacillus
casei W56]
Length = 296
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 122/316 (38%), Positives = 171/316 (54%), Gaps = 30/316 (9%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
+VD TLG GH+ I+ +L I D D +A+A A +L H
Sbjct: 9 YVDATLGRGGHTRQILNQLTTGRL-IAFDQDEAAIATVTADFGTLPKQLTLVH------- 60
Query: 197 KNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQAS 256
+NFR + L + + VD IL DLG+SS Q ++ +RGFS D PLDMRMD + +
Sbjct: 61 RNFRDLTDALTTLGI----TEVDGILYDLGVSSPQFDDSKRGFSYRFDAPLDMRMDQRQT 116
Query: 257 LKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPG 316
L A+ I+N WP A++ R+ YGEE + +I QAR + +T +LV+LI++ P
Sbjct: 117 LDAKTIVNEWPYADLVRIFSRYGEEHFSKQIARRIEQARTVQPITTTFQLVELIKAGIPA 176
Query: 317 MRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIV 376
+ RR G A +VFQA+RIAVNDEL LESSL + GGR+ VI+F SLEDR+V
Sbjct: 177 -KARRTGG-HPAKKVFQAIRIAVNDELSALESSLEQALKLINVGGRISVITFQSLEDRLV 234
Query: 377 KQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEER 436
K F +E+ +++D I Q N +++ ++PI PS EE
Sbjct: 235 KTMF---------------KEVSSVQDVPRGLPVIPASAQP-NYRLVNRKPILPSEEELA 278
Query: 437 LNCRCRSAKLRVIQKI 452
+N R SAKLRVI+KI
Sbjct: 279 VNHRAHSAKLRVIEKI 294
>gi|312898967|ref|ZP_07758355.1| S-adenosyl-methyltransferase MraW [Megasphaera micronuciformis
F0359]
gi|310620129|gb|EFQ03701.1| S-adenosyl-methyltransferase MraW [Megasphaera micronuciformis
F0359]
Length = 310
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 125/317 (39%), Positives = 167/317 (52%), Gaps = 32/317 (10%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
+VDCTLG GHS A+ + L IG+D D A+ A + Q P +
Sbjct: 25 YVDCTLGGGGHSRALADLLVKDGLIIGLDQDEDAIRAATERM------QDAP-CRFTAVQ 77
Query: 197 KNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQAS 256
+NFR++ VL D NI VD I+ DLG+SS Q++NPERGFS DGPLDMRMD
Sbjct: 78 RNFRYLGEVLD--DLNI--PTVDGIMFDLGVSSYQLDNPERGFSYQHDGPLDMRMDRHGK 133
Query: 257 LKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPG 316
A D++N++ +A++ R++++YGEE + + IV+AR T ELV +I+ P
Sbjct: 134 KSAYDVINAYDEADLYRIIKDYGEERWAKRIASFIVKARREKPFERTEELVRVIKQAIPA 193
Query: 317 MRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIV 376
G R+ A R FQA+RI VNDELK L+ + + L PGG +G+I+FHSLEDRI
Sbjct: 194 --GARKDGPHPAKRTFQAVRIEVNDELKILQDTFEIAANRLKPGGHIGIITFHSLEDRIA 251
Query: 377 KQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTK-RPITPSAEEE 435
KQT LR + I I + K + I PS EE
Sbjct: 252 KQT------------------LRKLATGCICPPHIPVCTCHHEAILKVKGKGIGPSKEEL 293
Query: 436 RLNCRCRSAKLRVIQKI 452
LN R RSAKLRV +I
Sbjct: 294 ELNPRARSAKLRVGTRI 310
>gi|315924810|ref|ZP_07921027.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Pseudoramibacter alactolyticus ATCC 23263]
gi|315621709|gb|EFV01673.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Pseudoramibacter alactolyticus ATCC 23263]
Length = 314
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 131/346 (37%), Positives = 181/346 (52%), Gaps = 37/346 (10%)
Query: 110 QQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPS 169
+ Q HI V+ E + R +VDCTLG GHS AI RA IG+D D
Sbjct: 3 EDNQGKHITVLRDEAIAGLGIVRG-GIYVDCTLGGGGHSEAICRALGHQGTLIGIDQDQY 61
Query: 170 ALAKARAHLNSLLHGQAHPHLKTHTFAKN-FRHIKSVLGQIDENILRSGVDAILMDLGMS 228
AL++A L S + H F +N F +++VL +N D L DLG+S
Sbjct: 62 ALSRAETRLRS---QRCH-----KIFVRNNFVDLETVL----DNAGIEKADGFLFDLGVS 109
Query: 229 SMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQ 288
S Q + ERGFS DGPLDMRMD L AE ++N++ ++ R+L YGEE +
Sbjct: 110 SFQFDQAERGFSYHHDGPLDMRMDRSRPLTAERVVNTYSQEDLKRILWGYGEEKMSGRVA 169
Query: 289 NKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLES 348
IV+AR + + TG+L ++I++ P + +R+G A + FQALRI VN EL+ L
Sbjct: 170 AAIVKARAQAPITRTGQLAEIIKAAYP-EKLKRKGH--PAKKTFQALRIEVNGELRILND 226
Query: 349 SLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE 408
+L A D L PGGR+ VI+FHSLED++VK+ F E A D I
Sbjct: 227 ALKAAIDRLNPGGRICVITFHSLEDQLVKRLFT-------EQA-----------DPCICP 268
Query: 409 TWIRQIIQGWNGKI--LTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ Q + G I +T++PI PS E N R RSAKLR+ ++I
Sbjct: 269 PELPQCVCGRVPTIKKITRKPIVPSETELAANRRARSAKLRIAERI 314
>gi|421851837|ref|ZP_16284529.1| methyltransferase MraW [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
gi|371479856|dbj|GAB29732.1| methyltransferase MraW [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
Length = 335
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/339 (37%), Positives = 180/339 (53%), Gaps = 33/339 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHI-GVDVDPSALAKA 174
HIPVML EVL+ + +DCT G G+SSAI+++ ++ G+D DP A+A+
Sbjct: 16 HIPVMLAEVLEYLHPADG-ERILDCTFGGGGYSSAILKS---ADCNVWGIDRDPDAIARG 71
Query: 175 RAHLNSL--LHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
+ + G + HL +F N + + S G S D I++DLG+SS Q+
Sbjct: 72 QVLSRTFPTADGGSRLHLLQGSFG-NMQALASAAGI-------STFDGIVLDLGVSSFQL 123
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ +RGFS +GPLDMRM+ ++ A DI+N P+AE+ + YGEE + L +V
Sbjct: 124 DEADRGFSFRMEGPLDMRME-KSGPSAADIVNKAPEAELADIFHFYGEERHARRLARAVV 182
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
AR +T +L DL++SV P + + I +ATR FQ LRIAVNDEL +E L
Sbjct: 183 NARSEAPFQTTTQLADLVRSVIP----KDRSGIDSATRAFQGLRIAVNDELGEIERGLEQ 238
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
D LAPGGRL V+SFHSLEDRI K+ ++ H A G ++ D T
Sbjct: 239 ALDMLAPGGRLVVVSFHSLEDRIAKR----MVQH----ATGKDKSFSRY-DPRAAGTPAP 289
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ + LT + PS E N R RSA+LR + K
Sbjct: 290 ET----DFVALTHKARRPSDTECSHNPRARSARLRAVMK 324
>gi|404414119|ref|YP_006699706.1| S-adenosyl-methyltransferase [Listeria monocytogenes SLCC7179]
gi|404239818|emb|CBY61219.1| S-adenosyl-methyltransferase [Listeria monocytogenes SLCC7179]
Length = 312
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 129/340 (37%), Positives = 176/340 (51%), Gaps = 36/340 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D+ + +VD TLG AGHS ++ E D D A+ A+
Sbjct: 4 HETVLLHETVDMLEV-KPDGIYVDATLGGAGHSEYLLNKLNEKGHLFAFDQDQIAIDNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L + + TF K NFR +K L + I VD IL DLG+SS Q++
Sbjct: 63 IKLAN--------YSDKVTFIKANFRDMKEALNE--RGI--EAVDGILYDLGVSSPQLDE 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS D LDMRMD + L A+ ++N W ++ R+ +YGEE + +I +
Sbjct: 111 RERGFSYHQDAALDMRMDQEQELTAKTVVNEWSYQDLIRIFFQYGEEKFSKQIAREIERR 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +TGELVD+I++ P R+ G R FQA+RIAVNDEL +E SL
Sbjct: 171 REVKPIETTGELVDIIKTAIPAPARRKGGH--PGKRTFQAIRIAVNDELGAVEDSLEKAL 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNINETWIR 412
+ PGGR+ VI+FHSLEDRI KQ F +E +G + L I D+
Sbjct: 229 TLIKPGGRISVITFHSLEDRITKQLF-------QEATKGPDLPPGLPVIPDE-------- 273
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ K+ T++PI PS EE N R RSAKLRVI+KI
Sbjct: 274 ---YKPDFKLATRKPIVPSEEELEQNNRARSAKLRVIEKI 310
>gi|403046899|ref|ZP_10902368.1| S-adenosyl-methyltransferase MraW [Staphylococcus sp. OJ82]
gi|402763595|gb|EJX17688.1| S-adenosyl-methyltransferase MraW [Staphylococcus sp. OJ82]
Length = 311
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 124/335 (37%), Positives = 178/335 (53%), Gaps = 30/335 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ VML E +D + + + +VDCTLG AGH+ ++ + I +D D +A+ A+
Sbjct: 4 HVSVMLKETID-YLNIKEDGVYVDCTLGGAGHALYLLNQLGDEGRLIAIDQDRTAIENAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L LH H NFR + +L D NI VD I DLG+SS Q++ P
Sbjct: 63 EVLKEHLHKVTFVH-------SNFRKLTEILN--DLNI--EKVDGIYYDLGVSSPQLDVP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D LDMRMD SL A +++N W ++ R+ YGEE + +I Q R
Sbjct: 112 ERGFSYHNDAKLDMRMDQTQSLSAYEVVNDWQFEKLVRIFHRYGEEKFSKQIARRIEQNR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +T ELVD+I+ P + RR+G A R+FQA+RIAVNDEL + E SL
Sbjct: 172 EQKPIETTLELVDVIKEGIPA-KARRKGG-HPAKRIFQAIRIAVNDELSSFEDSLEQAIG 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
+ GR+ VI+FHSLEDR+ KQ F ++ E + R + I E + ++
Sbjct: 230 AVKIDGRISVITFHSLEDRLCKQMF--------QEYEKGPDVPRGL--PVIPEAYTPKL- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
K + ++PIT + E+ N R RSAKLRV +
Sbjct: 279 -----KRVNRKPITAAEEDLDNNNRARSAKLRVAE 308
>gi|297583942|ref|YP_003699722.1| S-adenosyl-methyltransferase MraW [Bacillus selenitireducens MLS10]
gi|297142399|gb|ADH99156.1| S-adenosyl-methyltransferase MraW [Bacillus selenitireducens MLS10]
Length = 317
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/317 (36%), Positives = 162/317 (51%), Gaps = 33/317 (10%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
+VDCTLG GHS I++ E I D D SA+A A+ L +G + H
Sbjct: 24 YVDCTLGGGGHSERILQELGEDGKLIAFDQDESAIAHAKERLKP--YGD-----RLHIVK 76
Query: 197 KNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQAS 256
+NFR +K L E + VD I+ DLG+SS Q + PERGFS D PLDMRMD +
Sbjct: 77 RNFRFLKEEL----EKLGYREVDGIIFDLGVSSPQFDVPERGFSYRFDAPLDMRMDQTSE 132
Query: 257 LKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPG 316
L A ++N W ++ ++ YGEE + KI + R + +T ELV++I+ P
Sbjct: 133 LTAHKVINEWSFEDLMKIFSRYGEEKFAKYIARKIEKYRETKPVETTFELVEIIKDAIPA 192
Query: 317 MRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIV 376
R+ G A R FQA+RIAVNDEL E +L APGGR+ VI+FHSLEDRI
Sbjct: 193 PARRKGGH--PAKRTFQAIRIAVNDELGVFEKALEDAVTMTAPGGRIAVITFHSLEDRIC 250
Query: 377 KQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNG--KILTKRPITPSAEE 434
KQ F R + + + +G+ K++ ++PIT + +E
Sbjct: 251 KQLF------------------RKLSQPPELPRGMPVVPEGYEPVLKLINRKPITANVDE 292
Query: 435 ERLNCRCRSAKLRVIQK 451
N R SAKLR+ +K
Sbjct: 293 LDDNHRSHSAKLRIAEK 309
>gi|402310995|ref|ZP_10829950.1| S-adenosyl-methyltransferase MraW [Eubacterium sp. AS15]
gi|400366117|gb|EJP19153.1| S-adenosyl-methyltransferase MraW [Eubacterium sp. AS15]
Length = 309
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 121/342 (35%), Positives = 176/342 (51%), Gaps = 36/342 (10%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
+ +H V+L E +D + ++VD T G GHS ++ + L++ D D A+
Sbjct: 2 EYNHKSVLLYETVDSLNVKEG-NTYVDATFGGGGHSGYLLSKANNINLYV-FDQDEEAIK 59
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLG--QIDENILRSGVDAILMDLGMSSM 230
+N+ H NF +IKS L QI + +D ++ DLG+SS
Sbjct: 60 NG---MNNFAGNN-----NIHFINTNFVNIKSALYERQI------AKIDGLIADLGVSSY 105
Query: 231 QVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNK 290
Q++N ERGFS + D PLDMRMD + L A D++N++ ++ ++R YGEE+ +
Sbjct: 106 QLDNAERGFSYMNDAPLDMRMDKNSPLTAYDVVNNYSKEQLSDIIRRYGEENWADKIAQV 165
Query: 291 IVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSL 350
IV R + + +T ELVD+I+ P + R A R FQA+RI VN+E+K LE L
Sbjct: 166 IVDRRGQKSIDTTFELVDVIEKAIP--KKLRDKNKHPAKRTFQAIRIEVNNEIKILEKFL 223
Query: 351 HACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETW 410
F+ L+ GGRL VI+FHSLEDR VK F ++ E
Sbjct: 224 RDAFELLSSGGRLSVITFHSLEDRAVKNIFKELVGGCICPK----------------EFP 267
Query: 411 IRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
I + +I+TK+P PS EE + N R RSAKLRVI+KI
Sbjct: 268 ICMCNKKEEARIITKKPTVPSDEELKNNPRSRSAKLRVIEKI 309
>gi|254564005|ref|YP_003071100.1| S-adenosyl-dependent methyltransferase [Methylobacterium extorquens
DM4]
gi|254271283|emb|CAX27295.1| S-adenosyl-dependent methyltransferase [Methylobacterium extorquens
DM4]
Length = 351
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 123/340 (36%), Positives = 184/340 (54%), Gaps = 32/340 (9%)
Query: 112 QQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
+Q+ H+PV+L EVL S R + VD T GA G++ A++ A PE+++ I +D DP+A+
Sbjct: 16 EQARHVPVLLAEVLAALSLDRPGLA-VDGTFGAGGYTRALLEAGPEVRV-IAIDRDPTAI 73
Query: 172 AKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQ 231
+ A L + G + F + +++ DE + D +++D+G+SSMQ
Sbjct: 74 -RGGADLVTASGG------RLRLVQGRFGDLDTLIADQDE----AQADWVVLDIGVSSMQ 122
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ +RGFS DGPLDMRM + A D++N + + +L +GEE + I
Sbjct: 123 IDEAQRGFSFRQDGPLDMRMGGEGP-SAADLVNGEEETTLADILYHFGEERRSRAVARAI 181
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
V+AR R + +T +L DL+ V +R I ATR FQ LRIAVNDEL L LH
Sbjct: 182 VEARRRAPIETTAQLADLVAGV---VRPEPGSPIHPATRSFQGLRIAVNDELGELVRGLH 238
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
A L PGGRL V++FHSLEDRIVKQ F + + A+ + R++ +
Sbjct: 239 AAERVLKPGGRLAVVTFHSLEDRIVKQFFSA---RSGRAAQAS----RHV--PGVERPAP 289
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ K++TK P+ PS E +N R RSAKLR ++
Sbjct: 290 KSF------KLVTKGPVLPSEAETDVNPRSRSAKLRAGER 323
>gi|424789423|ref|ZP_18216077.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium V689]
gi|424901165|ref|ZP_18324702.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium R497]
gi|424955110|ref|ZP_18369970.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium R494]
gi|424964074|ref|ZP_18378215.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium P1190]
gi|425039743|ref|ZP_18444247.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium 513]
gi|425061076|ref|ZP_18464341.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium 503]
gi|402922103|gb|EJX42508.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium V689]
gi|402931334|gb|EJX50920.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium R497]
gi|402934997|gb|EJX54290.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium R494]
gi|402947488|gb|EJX65696.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium P1190]
gi|403014729|gb|EJY27699.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium 513]
gi|403042013|gb|EJY52989.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium 503]
Length = 319
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 131/341 (38%), Positives = 179/341 (52%), Gaps = 37/341 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHI-GVDVDPSALAKA 174
H VML E +D + + +VDCTLG AGHS ++ + K H+ D D A+ A
Sbjct: 7 HYTVMLKETVDGLNI-KPDGVYVDCTLGGAGHSEYLL-SQLSSKGHLYAFDQDQKAIDHA 64
Query: 175 RAHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQ-IDENILRSGVDAILMDLGMSSMQ 231
+ L S + G TF K NFR ++ L + +D+ VD IL DLG+SS Q
Sbjct: 65 KLRLASYVEQGMV-------TFIKANFRELEERLSEHVDK------VDGILYDLGVSSPQ 111
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ ERGFS D PLDMRMD A L A ++N + E+ ++ YGEE + +I
Sbjct: 112 LDEAERGFSYHQDAPLDMRMDQSAPLSAYHVINEYSYHELVKIFFRYGEEKFSKQIAREI 171
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
+ R + +TGELV++I+ V P R+ G A R+FQA+RIAVNDEL E+SL
Sbjct: 172 ERVRKTKPIQTTGELVEIIKQVIPAPARRKGGH--PAKRIFQAVRIAVNDELGAEEASLE 229
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
L GR+ VI+FHSLEDRIVK F +E ++D I
Sbjct: 230 QAIGLLKVNGRISVITFHSLEDRIVKSMF---------------KEYSTVQDLPPGLPVI 274
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
Q K++T++PI PS EE N R RSAKLR+ +KI
Sbjct: 275 PDEFQP-ELKVITRKPILPSEEELTENNRSRSAKLRIAEKI 314
>gi|257885174|ref|ZP_05664827.1| methyltransferase [Enterococcus faecium 1,231,501]
gi|261206514|ref|ZP_05921214.1| methyltransferase [Enterococcus faecium TC 6]
gi|289565424|ref|ZP_06445873.1| methylase MraW [Enterococcus faecium D344SRF]
gi|294614715|ref|ZP_06694617.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium E1636]
gi|294618987|ref|ZP_06698482.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium E1679]
gi|425058731|ref|ZP_18462107.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium 504]
gi|430821345|ref|ZP_19439956.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E0045]
gi|430826916|ref|ZP_19445084.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E0164]
gi|430829516|ref|ZP_19447609.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E0269]
gi|430833732|ref|ZP_19451743.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E0679]
gi|430839120|ref|ZP_19457062.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E0688]
gi|430851052|ref|ZP_19468808.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1185]
gi|430853490|ref|ZP_19471218.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1258]
gi|430859669|ref|ZP_19477278.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1552]
gi|430869891|ref|ZP_19483046.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1575]
gi|431185979|ref|ZP_19500042.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1620]
gi|431677791|ref|ZP_19524389.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1904]
gi|431745468|ref|ZP_19534312.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E2134]
gi|431765956|ref|ZP_19554455.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E4215]
gi|257821026|gb|EEV48160.1| methyltransferase [Enterococcus faecium 1,231,501]
gi|260079224|gb|EEW66915.1| methyltransferase [Enterococcus faecium TC 6]
gi|289162753|gb|EFD10604.1| methylase MraW [Enterococcus faecium D344SRF]
gi|291592453|gb|EFF24060.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium E1636]
gi|291594648|gb|EFF26030.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium E1679]
gi|403037586|gb|EJY48851.1| S-adenosyl-methyltransferase MraW [Enterococcus faecium 504]
gi|430438608|gb|ELA49025.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E0045]
gi|430444462|gb|ELA54300.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E0164]
gi|430480955|gb|ELA58126.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E0269]
gi|430486137|gb|ELA63005.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E0679]
gi|430491117|gb|ELA67599.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E0688]
gi|430534809|gb|ELA75244.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1185]
gi|430540571|gb|ELA80773.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1258]
gi|430543206|gb|ELA83281.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1552]
gi|430559268|gb|ELA98627.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1575]
gi|430572964|gb|ELB11799.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1620]
gi|430599284|gb|ELB36995.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1904]
gi|430610224|gb|ELB47376.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E2134]
gi|430627399|gb|ELB63901.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E4215]
Length = 319
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 131/341 (38%), Positives = 179/341 (52%), Gaps = 37/341 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHI-GVDVDPSALAKA 174
H VML E +D + + +VDCTLG AGHS ++ + K H+ D D A+ A
Sbjct: 7 HYTVMLKETVDGLNI-KPDGVYVDCTLGGAGHSEYLL-SQLSSKGHLYAFDQDQKAIDHA 64
Query: 175 RAHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQ-IDENILRSGVDAILMDLGMSSMQ 231
+ L S + G TF K NFR ++ L + +D+ VD IL DLG+SS Q
Sbjct: 65 KLRLASYVEQGMV-------TFIKANFRELEERLSEHVDK------VDGILYDLGVSSPQ 111
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ ERGFS D PLDMRMD A L A ++N + E+ ++ YGEE + +I
Sbjct: 112 LDEAERGFSYHQDAPLDMRMDQSAPLSAYHVINEYSYHELVKIFFRYGEEKFSKQIAREI 171
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
+ R + +TGELV++I+ V P R+ G A R+FQA+RIAVNDEL E+SL
Sbjct: 172 ERVRKTKPIQTTGELVEIIKQVIPAPARRKGGH--PAKRIFQAVRIAVNDELGAEEASLE 229
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
L GR+ VI+FHSLEDRIVK F +E ++D I
Sbjct: 230 QAIRLLKVNGRISVITFHSLEDRIVKSMF---------------KEYSTVQDLPPGLPVI 274
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
Q K++T++PI PS EE N R RSAKLR+ +KI
Sbjct: 275 PDEFQP-ELKVITRKPILPSEEELAENNRSRSAKLRIAEKI 314
>gi|348026405|ref|YP_004766210.1| ribosomal RNA small subunit methyltransferase H [Megasphaera
elsdenii DSM 20460]
gi|341822459|emb|CCC73383.1| ribosomal RNA small subunit methyltransferase H [Megasphaera
elsdenii DSM 20460]
Length = 310
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 129/335 (38%), Positives = 168/335 (50%), Gaps = 35/335 (10%)
Query: 116 HIPVMLGEVLD-VFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
H+ V+ E +D + + I +VDCTLG GHS A+ IG+D D A+A A
Sbjct: 5 HVSVLRQETIDNLITDPDGI--YVDCTLGGGGHSRALAGRLSAKATLIGLDQDKDAIAAA 62
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L + +NFR++ VL ++ VD ++ DLG+SS Q++
Sbjct: 63 TERLKDTA-------CRRILVQRNFRYLPDVLDELGIE----KVDGVMFDLGVSSYQLDT 111
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
PERGFS + DGPLDMRMD A DI+N + A++ R+++ YGEE + IV+A
Sbjct: 112 PERGFSYMQDGPLDMRMDRDQKRSAYDIVNGYSQADLYRIIKTYGEERWAKRIAAFIVEA 171
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R L T ELV +I+ P G R+ A R FQA+RI VNDEL L SL
Sbjct: 172 RREKPLERTEELVQVIKKAIPA--GARKDGPHPAKRTFQAIRIEVNDELGILHDSLEHAA 229
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
L PGGRL VI+FHSLEDRI KQT LR + D I +
Sbjct: 230 QRLKPGGRLCVITFHSLEDRIAKQT------------------LRLLATDCICPPDMPVC 271
Query: 415 IQGWNGKILTKR-PITPSAEEERLNCRCRSAKLRV 448
+ + KR PI PS EE N R RSAKLRV
Sbjct: 272 TCHHHAILKVKRQPILPSQEELDTNPRARSAKLRV 306
>gi|407016136|gb|EKE29899.1| S-adenosyl-dependent methyltransferase MraW [uncultured bacterium
(gcode 4)]
Length = 321
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 120/353 (33%), Positives = 176/353 (49%), Gaps = 43/353 (12%)
Query: 107 SIIQQQQSSHIPVMLGEVLDVFSSSRTITSFV-DCTLGAAGHSSAIIRAHPELKLHIGVD 165
+I+ Q HIPV+ E+L+ S + + V D TL H+ I+ E + I D
Sbjct: 2 TILATQNPWHIPVLFHEILEGISLHQDRQNIVVDATLWLWWHAIWILSKMNEGDIFIAFD 61
Query: 166 VDPSALAKARAHLNSLLHGQ-AHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAI--- 221
D L A+ ++ + + + + ++K H NFR +K EN+L VD I
Sbjct: 62 ADSDNLKSAQINIEAQIWSELKNKNIKIHYIHSNFRLLK-------ENLLNVWVDKITNI 114
Query: 222 LMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEE 281
D G++S+ +N E+ FS PLD+R D + A+D++N++ + E+ ++ Y EE
Sbjct: 115 YYDFGVNSVHYDNAEKWFSFRLSWPLDLRYDRTSWKSAKDVVNTYDEQELRKIFYSYWEE 174
Query: 282 SNWHLLQNKIVQARLRGGLHSTGELVDLIQ--SVTPGMRGRRQGWIKTATRVFQALRIAV 339
+ I+QAR + +T EL D+IQ S P K+ TRVFQALRI V
Sbjct: 175 KKTPFIVEAILQARKIAPISTTDELADIIQKSSFDP----------KSKTRVFQALRIEV 224
Query: 340 NDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELR 399
NDE ++ SL + L G + I+FHSLEDRIVK+ F + +D G
Sbjct: 225 NDEFWSIRDSLKEAIEMLEVGWTMECITFHSLEDRIVKEIFAGFCEEEIDDFTG------ 278
Query: 400 NIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
Q I+ W K +TK+PI P+AEE N R RSAKLR+IQKI
Sbjct: 279 -------------QTIKTWIAKKITKKPIIPTAEELERNPRSRSAKLRIIQKI 318
>gi|339441323|ref|YP_004707328.1| hypothetical protein CXIVA_02590 [Clostridium sp. SY8519]
gi|338900724|dbj|BAK46226.1| hypothetical protein CXIVA_02590 [Clostridium sp. SY8519]
Length = 314
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 126/319 (39%), Positives = 169/319 (52%), Gaps = 36/319 (11%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
+VD TLG AGHS I R E IG+D D A+ A L F
Sbjct: 25 YVDGTLGGAGHSYEICRRISERGRLIGIDQDADAIRAATQRLEP--------------FR 70
Query: 197 KNFRHIKSVLGQIDENILRSG---VDAILMDLGMSSMQVNNPERGFSVLG-DGPLDMRMD 252
R I+S ++ E + R G VD IL+DLG+SS Q++ RGF+ D PLDMRMD
Sbjct: 71 DKVRIIRSNYHEMGEVLSREGIPAVDGILLDLGVSSYQLDEQSRGFTYREEDAPLDMRMD 130
Query: 253 PQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQS 312
+ SL A DI+N + +AE+ R++REYGEE + IVQAR + + + G+L +I+
Sbjct: 131 QRQSLTARDIVNGYSEAELCRIIREYGEERFARSIAKNIVQAREKEPIVTAGQLNAVIRR 190
Query: 313 VTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLE 372
P + R G A R +QA+RI +N EL+ LE S+ L PGGRL +I+FHSLE
Sbjct: 191 SIPA-KAREHGG-HPAKRTYQAIRIELNHELEVLEESIDGMIQLLKPGGRLCIITFHSLE 248
Query: 373 DRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSA 432
DRIVKQ F NE D + ++ Q G++LTK+PI P
Sbjct: 249 DRIVKQNFRR-----------NENPCTCPPDFPV--CVCGKVSQ---GRMLTKKPILPGE 292
Query: 433 EEERLNCRCRSAKLRVIQK 451
EE + N R +SAKLRV +K
Sbjct: 293 EEMKANRRAKSAKLRVFEK 311
>gi|427709256|ref|YP_007051633.1| ribosomal RNA small subunit methyltransferase H [Nostoc sp. PCC
7107]
gi|427361761|gb|AFY44483.1| Ribosomal RNA small subunit methyltransferase H [Nostoc sp. PCC
7107]
Length = 298
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 129/353 (36%), Positives = 174/353 (49%), Gaps = 57/353 (16%)
Query: 100 NKDYDYESIIQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELK 159
N D+ II +Q SH+PV+ EV+ S ++D T+G GHS I++ +++
Sbjct: 2 NSDFSPSLIIDEQIFSHLPVLPQEVITGLGVSAG-GYYLDTTVGGGGHSRLILQTALDIQ 60
Query: 160 LHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVD 219
L +D D ALA AR L F + + IKS + +
Sbjct: 61 L-TAIDQDEDALAAARKELAE--------------FGERVKFIKSNFASYP--FPTATFN 103
Query: 220 AILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYG 279
IL DLG+SS Q++ PERGFS LDMRMD Q L A D++N W + E+ + +YG
Sbjct: 104 GILADLGVSSYQLDTPERGFSFRHTASLDMRMDKQGLLNAADVINDWDERELADIFFKYG 163
Query: 280 EESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAV 339
EE + +IV+ R +T +L + I S P R G I ATR FQALRI V
Sbjct: 164 EERLSRRIARRIVERR---PFSTTTQLAEAIASAVPP--KYRYGRIHPATRAFQALRIVV 218
Query: 340 NDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELR 399
NDELK+LE+ L + L PGGR+ VISFHSLEDRIVK + LR
Sbjct: 219 NDELKSLETFLEKAPNALVPGGRIAVISFHSLEDRIVKHS------------------LR 260
Query: 400 NIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
N +R ++TK+PIT E N R RSAKLR+ ++I
Sbjct: 261 -------NSPLLR---------VITKKPITAQELEIANNPRSRSAKLRIAERI 297
>gi|306821091|ref|ZP_07454707.1| S-adenosyl-methyltransferase MraW [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304550784|gb|EFM38759.1| S-adenosyl-methyltransferase MraW [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 309
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 121/340 (35%), Positives = 176/340 (51%), Gaps = 32/340 (9%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
+ +H V+L E +D + ++VD T G GHS ++ + L++ D D A+
Sbjct: 2 EYNHKSVLLYETVDSLNVKEG-NTYVDATFGGGGHSGYLLSKANNINLYV-FDQDEEAIK 59
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
+N+ H NF +IKS L + I + +D ++ DLG+SS Q+
Sbjct: 60 NG---MNNFAGNN-----NIHFINTNFVNIKSAL--YERKITK--IDGLIADLGVSSYQL 107
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+N ERGFS + D PLDMRMD + L A D++N++ ++ ++R YGEE+ + IV
Sbjct: 108 DNAERGFSYMNDAPLDMRMDKNSPLTAYDVVNNYSKEQLSDIIRRYGEENWADKIAQVIV 167
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
R + + +T ELVD+I+ P + R A R FQA+RI VN+E+K LE L
Sbjct: 168 DRRGQKSIDTTFELVDVIEKAIP--KKLRDKNKHPAKRTFQAIRIEVNNEIKILEKFLCD 225
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
F+ L+ GGRL VI+FHSLEDR VK F ++ E I
Sbjct: 226 AFELLSSGGRLSVITFHSLEDRAVKNIFKELVGGCICPK----------------EFPIC 269
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ I+TK+PI PS EE + N R RSAKLRVI+KI
Sbjct: 270 MCNRKEEATIITKKPIVPSDEELKNNPRSRSAKLRVIEKI 309
>gi|387910406|ref|YP_006340712.1| S-adenosyl-methyltransferase MraW [Streptococcus thermophilus
MN-ZLW-002]
gi|387575341|gb|AFJ84047.1| S-adenosyl-methyltransferase MraW [Streptococcus thermophilus
MN-ZLW-002]
Length = 316
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 126/341 (36%), Positives = 181/341 (53%), Gaps = 37/341 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG AGHSS ++ E D D A+ A+
Sbjct: 7 HVTVLLHETVDMLDI-KPDGIYVDATLGGAGHSSYLLSQLSEKGHLYCFDQDQKAIDNAQ 65
Query: 176 AHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
L + G TF K NFR++KS L E + S +D IL DLG+SS Q++
Sbjct: 66 VRLKDYIDKGMV-------TFIKDNFRNLKSNL----EALGVSEIDGILYDLGVSSPQLD 114
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
ERGFS D LDMRM+ +ASL A D++N++P ++ R+ +YGE+ + KI Q
Sbjct: 115 ERERGFSYKQDAKLDMRMNEEASLTAYDVVNTYPYNDLVRIFFKYGEDKFSKQIARKIEQ 174
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +T EL ++I+S P +++G A ++FQA+RI VNDEL E S+
Sbjct: 175 ARQVKPIETTTELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAAEESIQEA 232
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTF--LSIIDHNREDAEGNEEELRNIRDDNINETWI 411
D LA GR+ VI+FHSLEDR+ KQ F S +D + +I
Sbjct: 233 LDLLAVDGRISVITFHSLEDRLTKQLFKEASTVDVPK------------------GLPFI 274
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ +Q ++ ++PI PS EE N R SAKLRV +KI
Sbjct: 275 PEDLQPKVA-LVNRKPILPSQEELEANNRSHSAKLRVAKKI 314
>gi|223043777|ref|ZP_03613820.1| S-adenosyl-methyltransferase MraW [Staphylococcus capitis SK14]
gi|417907089|ref|ZP_12550865.1| S-adenosyl-methyltransferase MraW [Staphylococcus capitis VCU116]
gi|222442874|gb|EEE48976.1| S-adenosyl-methyltransferase MraW [Staphylococcus capitis SK14]
gi|341596720|gb|EGS39311.1| S-adenosyl-methyltransferase MraW [Staphylococcus capitis VCU116]
Length = 311
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 124/337 (36%), Positives = 179/337 (53%), Gaps = 34/337 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ VML E +D + + + +VDCTLG AGH+ ++ + I +D D +AL A+
Sbjct: 4 HVSVMLNETID-YLNIKEDGVYVDCTLGGAGHALYLLNQLNDEGRLIAIDQDLTALENAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L LH H NFR + ++L D NI + VD I DLG+SS Q++ P
Sbjct: 63 VVLKEHLHKVTFVH-------NNFRELTNILK--DLNIEK--VDGIYYDLGVSSPQLDVP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D LDMRMD SL A +++N W + ++ YGEE + +I R
Sbjct: 112 ERGFSYHHDAKLDMRMDQTQSLSAYEVVNEWSYEALVKIFYRYGEEKFSKQIARRIEANR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +T +LVD+I+ P + RR+G A RVFQA+RIAVNDEL E S+ +
Sbjct: 172 EQHPIETTLQLVDIIKEGIPA-KARRKGG-HPAKRVFQAIRIAVNDELSAFEDSIEQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
+ GR+ VI+FHSLEDR+ KQ F ++ E E R I I
Sbjct: 230 SVNVNGRISVITFHSLEDRLCKQIF--------QEYEKGPEVPRG----------IPIIP 271
Query: 416 QGWNGKI--LTKRPITPSAEEERLNCRCRSAKLRVIQ 450
+G++ K+ + ++PIT + E+ N R RSAKLRV +
Sbjct: 272 EGYSPKLKRVNRKPITATEEDLDENNRARSAKLRVAE 308
>gi|366088741|ref|ZP_09455214.1| 16S rRNA m(4)C1402 methyltranserfase [Lactobacillus acidipiscis
KCTC 13900]
Length = 316
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 175/339 (51%), Gaps = 32/339 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAII-RAHPELKLHIGVDVDPSALAKA 174
H V+L E ++ R +VDCTLG GHS ++ P KL D D +A+
Sbjct: 6 HETVLLNEAIENLDVKRD-GYYVDCTLGGGGHSHRLLSELGPNGKL-FSFDQDETAIEYN 63
Query: 175 RAHLNSLLH-GQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
+ +L + +H GQ KNFR + L Q D +GV+ ++ DLG+SS Q +
Sbjct: 64 QKNLATYIHSGQ------LVLIQKNFRELNQSLKQQD----ITGVNGLVYDLGVSSPQFD 113
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
RGFS D PLDMRM+ L A I+N W E+ R+ YGEE + +I
Sbjct: 114 VASRGFSYRKDAPLDMRMNQGQPLTAAKIINEWSYQELVRIFFRYGEEKYAKSIARRIEA 173
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
R + +TG+LV+LI+ P + RR G A +VFQALRIAVNDEL LE SL
Sbjct: 174 DRNEQRIETTGQLVELIKQGIPA-KARRHGG-HPAKKVFQALRIAVNDELGALEESLEQA 231
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
D L PGGR+ VI+F SLEDR+VK F +E ++ D I
Sbjct: 232 LDLLLPGGRISVITFQSLEDRLVKGLF---------------KEKASVPDLPPGLPVIPS 276
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+Q + K++TK+PI P EE N R SAKLRVI+KI
Sbjct: 277 GMQP-DFKLVTKKPIVPLKEELERNHRAHSAKLRVIEKI 314
>gi|365132406|ref|ZP_09342172.1| S-adenosyl-methyltransferase MraW [Subdoligranulum sp. 4_3_54A2FAA]
gi|363616912|gb|EHL68332.1| S-adenosyl-methyltransferase MraW [Subdoligranulum sp. 4_3_54A2FAA]
Length = 307
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/339 (37%), Positives = 170/339 (50%), Gaps = 38/339 (11%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HIPV+L E +D + R ++D T G AGHS I +L I +D DP A+A A
Sbjct: 5 HIPVLLAECIDGLAI-RPDGIYLDGTAGGAGHSKEIAARLTTGRL-IALDQDPDAVAAAS 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L L NFR+ L Q+ + G+D +L+DLG+SS Q++
Sbjct: 63 QRLEGL---------PATVVQSNFRYADRALAQLGVD----GLDGVLLDLGVSSHQLDEV 109
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
RGFS GD PLDMRM Q+ A D++N+ AE+ R+L+EYGEE + KI AR
Sbjct: 110 SRGFSYQGDAPLDMRMS-QSGPTAADLVNTASRAELCRILKEYGEEPYAWQIAGKIESAR 168
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +T +LV + S P R+ A R FQALRIAVN EL L L F
Sbjct: 169 AAAPIETTAQLVQAVASALPPAVRRKDK--NPARRTFQALRIAVNGELDALSEGLDVLFA 226
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L PGGR+ VI+FHSLEDR+VKQ F R +
Sbjct: 227 ALKPGGRMCVITFHSLEDRLVKQRF------------------RQWATACTCPPEFPVCV 268
Query: 416 QGWN--GKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
G K++TK+P+ +A E+ N R RSAKLR+++K+
Sbjct: 269 CGGKARAKLITKKPVEAAAGEQAENRRARSAKLRILEKL 307
>gi|398342682|ref|ZP_10527385.1| 16S rRNA m(4)C1402 methyltranserfase [Leptospira inadai serovar
Lyme str. 10]
Length = 321
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 127/349 (36%), Positives = 171/349 (48%), Gaps = 64/349 (18%)
Query: 116 HIPVMLGEVL----DVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
H V+ E+L DVF+ + I F+D T G GHS ++ P KL I +D D L
Sbjct: 10 HYSVLYREILSFFLDVFAPDQEIL-FLDGTAGEGGHSLLLLENFPRAKL-ILLDRDSVML 67
Query: 172 AKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILR-SGVD----AILMDLG 226
+A+A L +TH NF ++D+ LR G+D IL+DLG
Sbjct: 68 TRAKARLEQF-------QDRTHFIEANF-------SEVDKEFLRKEGLDRRPDGILLDLG 113
Query: 227 MSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHL 286
+S+ + + RGFS + PLDMR+ + AED++N++P+ + ++ EYGEE
Sbjct: 114 ISTFHLLHAGRGFSFRENEPLDMRLSSSGGISAEDVINTYPEKTLSKIFYEYGEERWTKK 173
Query: 287 LQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWI---KTATRVFQALRIAVNDEL 343
+ +++ R G + TGEL LI V P R+ W ATRVFQALRI VN EL
Sbjct: 174 IVEALLERRRHGRISYTGELAQLISRVIP-----RKFWPPGRHPATRVFQALRIEVNQEL 228
Query: 344 KTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRD 403
+E L D LAPGGR VISFHSLEDRIVK F
Sbjct: 229 LHIEFGLSKLLDALAPGGRFQVISFHSLEDRIVKNKF----------------------- 265
Query: 404 DNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
R + K++TK+P+ P EE R N RSAKLRVI K+
Sbjct: 266 --------RDYARLSGAKVVTKKPVLPGEEEMRENNASRSAKLRVIDKL 306
>gi|379795545|ref|YP_005325543.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Staphylococcus aureus subsp. aureus MSHR1132]
gi|356872535|emb|CCE58874.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Staphylococcus aureus subsp. aureus MSHR1132]
Length = 311
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/335 (37%), Positives = 175/335 (52%), Gaps = 30/335 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI VML E +D + ++DCTLG AGH+ ++ + I +D D +A+ A+
Sbjct: 4 HISVMLNETIDYLNVKEN-GVYIDCTLGGAGHALYLLNQLNDEGRLIAIDQDQTAIDNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L LH H NFR + ++L D NI VD I DLG+SS Q++ P
Sbjct: 63 EVLKDHLHKVTFVH-------SNFRELTNILN--DLNI--EKVDGIYYDLGVSSPQLDIP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D LDMRMD L A DI+N+W + ++ YGEE + +I R
Sbjct: 112 ERGFSYHHDATLDMRMDQTQELTAYDIVNNWSYEALVKIFYRYGEEKFSKQIARRIEAHR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +T ELVD+I+ P + RR+G A RVFQALRIAVNDEL E S+ +
Sbjct: 172 EQQPITTTLELVDIIKEGIPA-KARRKGG-HPAKRVFQALRIAVNDELSAFEDSIEQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
+ GR+ VI+FHSLEDR+ KQ F ++ E E R + I E + ++
Sbjct: 230 LVNVNGRISVITFHSLEDRLCKQVF--------QEYEKGPEVPRGL--PVIPEEYTPKL- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
K + ++PIT + E+ N R RSAKLRV +
Sbjct: 279 -----KRVNRKPITATEEDLDDNNRARSAKLRVAE 308
>gi|428181966|gb|EKX50828.1| hypothetical protein GUITHDRAFT_85227 [Guillardia theta CCMP2712]
Length = 276
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/317 (37%), Positives = 167/317 (52%), Gaps = 53/317 (16%)
Query: 146 GHSSAII-RAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKS 204
GH+++++ + H L++++G+D DP ALA A L +P +K NF +KS
Sbjct: 3 GHAASLLEQHHGALEMYMGIDQDPEALAMAGRRLEKF-----NPKVKL--VRGNFAEMKS 55
Query: 205 VLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILN 264
+ + +D IL+D+G SS+Q+++ RGFS + DGPLDMRMDP L A DI+N
Sbjct: 56 IASA--NGLEERSIDGILLDIGTSSLQLDDAARGFSFMRDGPLDMRMDPNGLLTAADIVN 113
Query: 265 SWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGEL-VDLIQSVTPGMR----- 318
+W + + V+ +YGEE + KIV AR + +T L + V+P +
Sbjct: 114 NWSEEAIAEVIYQYGEERKSRSIAKKIVTARTEKPISTTLVLCLAYPPHVSPPCQQLCKI 173
Query: 319 ---GRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRI 375
R I +T FQALRIAVN EL L L D LAPGGRL VISFHSLEDRI
Sbjct: 174 IGGPRFSKGIHPSTLTFQALRIAVNRELHVLTHVLPQAMDLLAPGGRLAVISFHSLEDRI 233
Query: 376 VKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEE 435
VKQTF RD + +++TKRPIT + EE
Sbjct: 234 VKQTF---------------------RDSG-------------SFRLVTKRPITATTEET 259
Query: 436 RLNCRCRSAKLRVIQKI 452
+ N R RSAKLR+++K+
Sbjct: 260 KKNPRSRSAKLRIVEKL 276
>gi|406977354|gb|EKD99528.1| S-adenosyl-methyltransferase MraW [uncultured bacterium]
Length = 294
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/344 (36%), Positives = 173/344 (50%), Gaps = 56/344 (16%)
Query: 112 QQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHI-GVDVDPSA 170
QQ+ H PV+L EVL+ + ++DCTLG GH+ I++ L H+ G+D+D +A
Sbjct: 2 QQNYHTPVLLKEVLEALQI-KADGKYIDCTLGDGGHTLEILK----LGGHVLGIDIDETA 56
Query: 171 LAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG---VDAILMDLGM 227
+A + +T AKNF I++ +G V+ IL DLG
Sbjct: 57 GKRALGRI------------QTEGLAKNFTLAHGNFANIEKIASENGFEQVNGILFDLGY 104
Query: 228 SSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLL 287
SS Q+ E G S L D PLDMR+D + A D++N+ P ++ + EY +E +
Sbjct: 105 SSYQLTREELGLSFLEDQPLDMRLDKTLGVTAADLVNALPAKDLAHLFFEYSDERMANRF 164
Query: 288 QNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLE 347
IV+AR ++T +L DL+ SV P G G I ATRVFQALRIAVN E+ L+
Sbjct: 165 AKAIVEARSLKKFNTTKDLSDLLASVAPP--GYEHGRIHPATRVFQALRIAVNGEIDNLK 222
Query: 348 SSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNIN 407
+SL L PGGR+ VISFHSLED+ VKQ
Sbjct: 223 NSLPRAARLLLPGGRMTVISFHSLEDKTVKQF---------------------------- 254
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+R + K++T++P+ PS EE N R RSAKLRV +K
Sbjct: 255 GRGVRACL-----KVVTEKPLVPSEEEVLANARSRSAKLRVFEK 293
>gi|431760573|ref|ZP_19549170.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E3346]
gi|430623658|gb|ELB60336.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E3346]
Length = 319
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 131/341 (38%), Positives = 179/341 (52%), Gaps = 37/341 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHI-GVDVDPSALAKA 174
H VML E +D + + +VDCTLG AGHS ++ + K H+ D D A+ A
Sbjct: 7 HYTVMLKETVDGLNI-KPDGVYVDCTLGGAGHSEYLL-SQLSSKGHLYAFDQDQKAIDHA 64
Query: 175 RAHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQ-IDENILRSGVDAILMDLGMSSMQ 231
+ L S + G TF K NFR ++ L + +D+ VD IL DLG+SS Q
Sbjct: 65 KLRLASYVEQGMV-------TFIKANFRELEERLSEHVDK------VDGILYDLGVSSPQ 111
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ ERGFS D PLDMRMD A L A ++N + E+ ++ YGEE + +I
Sbjct: 112 LDEAERGFSYHQDAPLDMRMDQSAPLSAYHVINEYSYHELVKIFFRYGEEKFSKQIAREI 171
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
+ R + +TGELV++I+ V P R+ G A R+FQA+RIAVNDEL E+SL
Sbjct: 172 ERVRKTKRIQTTGELVEIIKQVIPAPARRKGGH--PAKRIFQAVRIAVNDELGAEEASLE 229
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
L GR+ VI+FHSLEDRIVK F +E ++D I
Sbjct: 230 QAIRLLKVNGRISVITFHSLEDRIVKSMF---------------KEYSTVQDLPPGLPVI 274
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
Q K++T++PI PS EE N R RSAKLR+ +KI
Sbjct: 275 PDEFQP-ELKVITRKPILPSEEELAENNRSRSAKLRIAEKI 314
>gi|397670609|ref|YP_006512144.1| S-adenosyl-methyltransferase MraW [Propionibacterium propionicum
F0230a]
gi|395142931|gb|AFN47038.1| S-adenosyl-methyltransferase MraW [Propionibacterium propionicum
F0230a]
Length = 318
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 155/280 (55%), Gaps = 22/280 (7%)
Query: 109 IQQQQSSHIPVMLGEVLDVFSSSRTITS--FVDCTLGAAGHSSAIIRAHPELKLHIGVDV 166
++ + H PVMLG V+++ S + T +VDCTLG GH+ A++ P +L IG+D
Sbjct: 1 METRDDVHEPVMLGRVVELLSPALTSPGAVYVDCTLGLGGHARAVLEVAPSARL-IGIDR 59
Query: 167 DPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDE---NILRSGVDAILM 223
DP ALA AR L L A+ +K+V ++ E ++ GV A+L
Sbjct: 60 DPDALAVARERLGPL--------------AERATLVKAVYDELPEVLADLGVGGVHAVLA 105
Query: 224 DLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESN 283
DLG+SS+Q++ ERGF+ D PLDMRM A D+LNS P E+ R+LR YGEE
Sbjct: 106 DLGLSSLQIDREERGFAYRVDAPLDMRMSRGEGRSAADLLNSAPPVELVRILRHYGEERF 165
Query: 284 WHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDEL 343
+ +V+ R S+G LV++I + P R A R FQALRIAVNDEL
Sbjct: 166 AERIVAAVVEEREIRPFKSSGRLVEVISNAIPA--AARHSPGHPAKRTFQALRIAVNDEL 223
Query: 344 KTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSI 383
TLE L A L GGRL V+S+HSLEDR VK+ ++
Sbjct: 224 ATLERFLPAATTALTLGGRLVVLSYHSLEDRPVKRHLAAL 263
>gi|116492952|ref|YP_804687.1| S-adenosyl-methyltransferase MraW [Pediococcus pentosaceus ATCC
25745]
gi|122265584|sp|Q03EX7.1|RSMH_PEDPA RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|116103102|gb|ABJ68245.1| SAM-dependent methyltransferase for cell envelope biogenesis
[Pediococcus pentosaceus ATCC 25745]
Length = 314
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/319 (38%), Positives = 168/319 (52%), Gaps = 33/319 (10%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLL-HGQAHPHLKTHTF 195
+VDCTLG GHS I+ E D D +A+ + +L + GQ TF
Sbjct: 26 YVDCTLGGGGHSRLILSKLGENGHLYSFDQDQTAIDYNQKNLAEYVAKGQV-------TF 78
Query: 196 AK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQ 254
K NFR++K+ L + + GVD +L DLG+SS Q ++ RGFS D PLDMRMD
Sbjct: 79 VKSNFRNLKNELNHLGID----GVDGVLYDLGVSSPQFDDAGRGFSYRFDAPLDMRMDQT 134
Query: 255 ASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVT 314
L A +++N W ++ R+ YGEE + KI R + +TGEL DLI+S
Sbjct: 135 QKLNAREVVNEWSYNDLVRIFFRYGEEKYSKQVARKIESTREEKPIETTGELADLIKSAI 194
Query: 315 PGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDR 374
P RR G A ++FQA+RIAVNDEL LE SL L P GR+ VI+F SLEDR
Sbjct: 195 PAA-ARRTGG-HPAKKIFQAIRIAVNDELGALEESLEQALQILNPAGRISVITFQSLEDR 252
Query: 375 IVKQTFLSIIDHNREDAE-GNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAE 433
+VK+ F +E E G+ I D++ + K++ ++PI PS +
Sbjct: 253 LVKRMF-------KEQTEIGDLPAGLPIIPDDMKPKY----------KLINRKPIIPSED 295
Query: 434 EERLNCRCRSAKLRVIQKI 452
E N R SAKLR+I+K+
Sbjct: 296 ELEENRRSHSAKLRIIEKL 314
>gi|427428868|ref|ZP_18918906.1| rRNA small subunit methyltransferase H [Caenispirillum salinarum
AK4]
gi|425881295|gb|EKV29984.1| rRNA small subunit methyltransferase H [Caenispirillum salinarum
AK4]
Length = 326
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 128/342 (37%), Positives = 179/342 (52%), Gaps = 40/342 (11%)
Query: 114 SSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAK 173
+ HIPV+L EV++ R VD T GA G++ AI+ A + ++ +G+D DP+A
Sbjct: 5 APHIPVLLNEVVNGLQP-RDGGVIVDGTFGAGGYTRAILNAA-DCRV-VGIDRDPTA--- 58
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG----VDAILMDLGMSS 229
Q H T F I G++ + +G VD +++D+G+SS
Sbjct: 59 -----------QRHAEAVTADHPGRFTLIPGRFGEMAALLPANGFPDPVDGVVLDIGVSS 107
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
MQ++ ERGFS DGPLDMRM+ ++ A D++N + + ++ YGEE + +
Sbjct: 108 MQIDEAERGFSFAKDGPLDMRME-KSGRTAADVVNEEEEGPLADLIYLYGEERHSRRVAR 166
Query: 290 KIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESS 349
IVQAR TGEL D+I+ V +R + G I ATR FQALRI VNDEL LE
Sbjct: 167 AIVQARQEKPFTRTGELADVIRRV---VRKSKDG-IDPATRTFQALRIVVNDELGELERG 222
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINET 409
L A L PGGRL V++FHSLEDR+VK+ I A G L + T
Sbjct: 223 LDAAERLLKPGGRLAVVTFHSLEDRVVKR----FIRERSGRAGGVSRHLPDAGAAGPAPT 278
Query: 410 WIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ K +T++ + PSAEE R N R RSAKLRV ++
Sbjct: 279 F----------KDITRKAVGPSAEEARANPRARSAKLRVAER 310
>gi|340399567|ref|YP_004728592.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Streptococcus salivarius CCHSS3]
gi|338743560|emb|CCB94070.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Streptococcus salivarius CCHSS3]
Length = 316
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/341 (36%), Positives = 182/341 (53%), Gaps = 37/341 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG AGHSS ++ E D D A+ A+
Sbjct: 7 HVTVLLHETVDMLDI-KPDGIYVDATLGGAGHSSYLLSQLSEKGHLYCFDQDQKAIDNAQ 65
Query: 176 AHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
L + G TF K NFR++KS L E + S +D IL DLG+SS Q++
Sbjct: 66 VRLKDYIDKGMV-------TFIKDNFRNLKSNL----EALGVSEIDGILYDLGVSSPQLD 114
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
ERGFS D LDMRM+ +ASL A D++N++P +++ R+ +YGE+ + KI Q
Sbjct: 115 ERERGFSYKQDAKLDMRMNEEASLTAYDVVNTYPYSDLVRIFFKYGEDKFSKQIARKIEQ 174
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +T EL ++I+S P +++G A ++FQA+RI VNDEL + S+
Sbjct: 175 ARQVKPIETTTELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADESIQEA 232
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTF--LSIIDHNREDAEGNEEELRNIRDDNINETWI 411
D LA GR+ VI+FHSLEDR+ KQ F S +D + +I
Sbjct: 233 LDLLAVDGRISVITFHSLEDRLTKQLFKEASTVDVPK------------------GLPFI 274
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ +Q ++ ++PI PS EE N R SAKLRV +KI
Sbjct: 275 PEDLQPKVA-LVNRKPILPSQEELEANNRSHSAKLRVAKKI 314
>gi|323142009|ref|ZP_08076860.1| S-adenosyl-methyltransferase MraW [Phascolarctobacterium
succinatutens YIT 12067]
gi|322413541|gb|EFY04409.1| S-adenosyl-methyltransferase MraW [Phascolarctobacterium
succinatutens YIT 12067]
Length = 310
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 131/342 (38%), Positives = 171/342 (50%), Gaps = 41/342 (11%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H ++L E +D + + +VDCT+G AGHSSA L IG+D D A+A
Sbjct: 5 HTSILLAESVDFLITDKN-GIYVDCTMGGAGHSSAFAAQLEAGGLLIGIDQDDDAIAAGS 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQ--IDENILRSGVDAILMDLGMSSMQVN 233
L + KT NF VL IDE +D I DLG+SS Q++
Sbjct: 64 ERLLNKFT------CKTAVAKSNFEIFSQVLDSMGIDE------IDGIFFDLGVSSYQLD 111
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
PERGFS + DGPLDMRM+ +ASL AE I+N + + E+ ++ YGEE + IV
Sbjct: 112 TPERGFSYMHDGPLDMRMNKEASLDAEYIVNHYKEEELADIIHRYGEERWAKRIAQFIVA 171
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR L +T ELVD+I+ P +G R A R FQA+RI VN+EL L ++
Sbjct: 172 ARKEKPLTTTFELVDVIKKAIP--KGARLDGPHPAKRTFQAIRIEVNNELGILADTMERA 229
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
+ L GGR+GVI+FHSLEDRI+KQTF + A+G T Q
Sbjct: 230 VNRLKSGGRIGVITFHSLEDRIIKQTFAKL-------AKGC--------------TCPPQ 268
Query: 414 IIQGWNGKILTKRP---ITPSAEEERLNCRCRSAKLRVIQKI 452
+ GK R I PS E N R RSA+LR KI
Sbjct: 269 LPVCVCGKKPLLRKTGNIVPSKAEVEENPRSRSARLRYAIKI 310
>gi|218289891|ref|ZP_03494081.1| S-adenosyl-methyltransferase MraW [Alicyclobacillus acidocaldarius
LAA1]
gi|218240031|gb|EED07217.1| S-adenosyl-methyltransferase MraW [Alicyclobacillus acidocaldarius
LAA1]
Length = 316
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 123/341 (36%), Positives = 178/341 (52%), Gaps = 36/341 (10%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
+H V+L E ++ R +VD TLG GH++ ++ I D D +A+A
Sbjct: 4 AHETVLLEEAVEALRP-RPGGVYVDATLGGGGHTARLLERSAPGGAVIAFDQDETAIA-- 60
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGV---DAILMDLGMSSMQ 231
H + +K+ +++E + GV D +L DLG+SS Q
Sbjct: 61 ------------HAEPLKRQYPGRLTLVKANFAEMEERLRALGVTAVDGVLFDLGVSSPQ 108
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
+ PERGFS +GPLDMRMD L A +I+N W + E+ R++REYGEE + I
Sbjct: 109 FDLPERGFSYWHEGPLDMRMDRHQPLTAREIVNEWDEQELARIIREYGEERFATAIARAI 168
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
+AR + + +T EL ++++S P RR G A R FQA+RIAVNDEL LE +
Sbjct: 169 ARARSKKPIETTTELAEIVKSAIPAA-ARRSG-PHPARRTFQAIRIAVNDELGALERGME 226
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
A F L PGGRL VI+FHSLEDR VK+ F + A+G E +
Sbjct: 227 AAFRALRPGGRLSVITFHSLEDRAVKRLFQTW-------AQGC---------ICPPEFPV 270
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
Q + G++++++P+TPS+EE N R RSAKLR +K+
Sbjct: 271 CQCGRKPLGRMVSRKPVTPSSEELERNPRARSAKLRAFEKL 311
>gi|34581504|ref|ZP_00142984.1| hypothetical protein [Rickettsia sibirica 246]
gi|28262889|gb|EAA26393.1| unknown [Rickettsia sibirica 246]
Length = 307
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/341 (36%), Positives = 188/341 (55%), Gaps = 42/341 (12%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHI-GVDVDPSALAK 173
SH+ VML E+L+ S + S++DCT GA G+S AI+ + ++ +D DP+ + +
Sbjct: 4 SHVSVMLNEMLEALSP-KAGESYLDCTFGAGGYSKAILES---CNCYVTALDRDPNVIKR 59
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
A + +G+ ++T+ FA +F +K D I++DLG+SSMQ++
Sbjct: 60 AEEIQQN--YGERFDFVETN-FADSFAKLKE-----------KKFDGIVLDLGVSSMQLD 105
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
+RGFS L DGPLDMRM Q L AE+ +N+ + E+ V+ +YG+ES + +IV+
Sbjct: 106 IADRGFSFLHDGPLDMRMSGQG-LSAEEFVNAAEEKELADVIYKYGDESFSRRIAKRIVE 164
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
R + ST +L ++++S G R+G I AT+ FQA+RI VNDEL LE L
Sbjct: 165 YRKTARIDSTTKLAEIVRSSI----GFRKGKIDPATKTFQAIRIYVNDELGELEQFLVNV 220
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE--TWI 411
+ L GRL V+SFHSLEDRIVK F +E++E + ++D + W+
Sbjct: 221 KNILKKDGRLVVVSFHSLEDRIVKNFF-------KENSEKPVVRSKYAKEDMTIDPNKWL 273
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
KI+T + + PS +E LN R RSAKLR + I
Sbjct: 274 ---------KIITNKALAPSDKEVGLNIRARSAKLRAAKAI 305
>gi|418018564|ref|ZP_12658120.1| 16S rRNA m(4)C1402 methyltransferase [Streptococcus salivarius M18]
gi|345527413|gb|EGX30724.1| 16S rRNA m(4)C1402 methyltransferase [Streptococcus salivarius M18]
Length = 316
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/339 (36%), Positives = 182/339 (53%), Gaps = 33/339 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG AGHSS ++ E D D A+ A+
Sbjct: 7 HVTVLLHETVDMLDI-KPDGIYVDATLGGAGHSSYLLSQLSEKGHLYCFDQDQKAIDNAQ 65
Query: 176 AHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
L + G TF K NFR++KS L E + S +D IL DLG+SS Q++
Sbjct: 66 VRLKDYIDKGMV-------TFIKDNFRNLKSNL----EALGVSEIDGILYDLGVSSPQLD 114
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
ERGFS D LDMRM+ +ASL A D++N++P ++ R+ +YGE+ + KI Q
Sbjct: 115 ERERGFSYKQDAKLDMRMNEEASLTAYDVVNTYPYNDLVRIFFKYGEDKFSKQIARKIEQ 174
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +T EL ++I+S P +++G A ++FQA+RI VNDEL + S+
Sbjct: 175 ARQVKPIETTTELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADESIQEA 232
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
D LA GR+ VI+FHSLEDR+ KQ F EG+ ++ +I +
Sbjct: 233 LDLLAVDGRISVITFHSLEDRLTKQLF----------KEGSTVDVPK------GLPFIPE 276
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+Q ++ ++PI PS EE N R SAKLRV +KI
Sbjct: 277 DLQPKVA-LVNRKPILPSQEELEANNRSHSAKLRVAKKI 314
>gi|189501435|ref|YP_001960905.1| S-adenosyl-methyltransferase MraW [Chlorobium phaeobacteroides BS1]
gi|263445802|sp|B3EQC6.1|RSMH_CHLPB RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|189496876|gb|ACE05424.1| S-adenosyl-methyltransferase MraW [Chlorobium phaeobacteroides BS1]
Length = 332
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/349 (35%), Positives = 183/349 (52%), Gaps = 40/349 (11%)
Query: 112 QQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLH-----IGVDV 166
+ + H+PVM+ EV+ I +VD TLG GHS AI+RA + L IG+D
Sbjct: 3 KAAYHLPVMVREVVAWLVRRAGI--YVDGTLGGGGHSLAILRALRDKGLEKGSFLIGIDQ 60
Query: 167 DPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRS-GVDAILMDL 225
D A+A+A L S +T NFR I ++ + EN LR V IL+DL
Sbjct: 61 DSFAIAEAERTLASFRE-------RTRLVQGNFREIADIVSTLRENQLRGMEVAGILLDL 113
Query: 226 GMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWH 285
G+SS Q++ ERGFS L GPLDMRM+P A DI+N++ + E+ + +GEE
Sbjct: 114 GVSSFQIDTSERGFSYLRSGPLDMRMEPDEGQSAADIVNTFEERELADIFFRFGEEKKSR 173
Query: 286 LLQNKIVQAR-LRGGLHSTGELVDLIQSV--TPGMRGRRQGWIKTATRVFQALRIAVNDE 342
+ + I R RG + T +L +++SV P + IK+ +R+FQALRIAVNDE
Sbjct: 174 RIASAICSWRNERGVIRGTQDLAAIVRSVVSVPDQQ------IKSLSRIFQALRIAVNDE 227
Query: 343 LKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIR 402
L LES+L L+P GR+ V+S+HS+EDR+VK F ++
Sbjct: 228 LGALESALKEGAASLSPQGRMAVMSYHSIEDRMVKHYFRTLAAD---------------- 271
Query: 403 DDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
D +R+ + ++T++ + +E N R RSAK+RVI++
Sbjct: 272 DWGPKGVALREPLHKAAFTLVTRKALIAGDDEVNENSRARSAKMRVIER 320
>gi|429759643|ref|ZP_19292141.1| S-adenosyl-methyltransferase MraW [Veillonella atypica KON]
gi|429179604|gb|EKY20851.1| S-adenosyl-methyltransferase MraW [Veillonella atypica KON]
Length = 310
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 128/335 (38%), Positives = 176/335 (52%), Gaps = 33/335 (9%)
Query: 115 SHIPVMLGEVLD-VFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAK 173
+H+ V+L E +D V ++ I +VDCTLG AGH+ A+ + IG+D D ALA
Sbjct: 4 NHVSVLLNETVDSVVTNPDGI--YVDCTLGGAGHAHAVGERLSSQGMIIGLDQDEDALAV 61
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
AR L+ L + T NF +K L + + I VD + DLG+SS Q++
Sbjct: 62 ARQRLSDLT-------CQVMTIPTNFSDLKQALEE--QGIYE--VDGFIFDLGVSSYQLD 110
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
PER FS + DGPLDMRMD +A + AE ++N + ++ +++R+YGEE + IV
Sbjct: 111 TPERVFSYMNDGPLDMRMDKEAPITAEIVVNEYESDKLLQIIRDYGEERWAKRIVEFIVA 170
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +TGELV +I+ P RQ A R FQA+RI VN EL L S
Sbjct: 171 ARNEKRITTTGELVSIIKKAIPA--KARQDGPHPAKRTFQAIRIEVNRELAILHDSFVDA 228
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
L P GR+GVI+FHSLEDRI KQTF + A EL + +
Sbjct: 229 VSMLKPKGRIGVITFHSLEDRITKQTFKEL-----STACICPPEL------PVCVCHHKA 277
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRV 448
+++ N + I PSA E +N R RSAKLRV
Sbjct: 278 VLKAKN------KAIEPSAGEVEMNPRSRSAKLRV 306
>gi|386781474|ref|NP_001247884.1| methyltransferase like 15 [Macaca mulatta]
gi|383414299|gb|AFH30363.1| putative methyltransferase-like protein 15 isoform 1 [Macaca
mulatta]
Length = 407
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 130/374 (34%), Positives = 201/374 (53%), Gaps = 47/374 (12%)
Query: 100 NKDYDYESIIQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELK 159
++D D+E++ + HIPVM+ EV+ S + F+D T G+ GH+ AI++ ++
Sbjct: 60 SQDRDFETMAK----LHIPVMVDEVVHCLSPQKG-QIFLDMTFGSGGHTKAILQKESDIV 114
Query: 160 LHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDEN---ILRS 216
L+ +D DP+A A A HL+ L +P + I++VLGQ + + ++
Sbjct: 115 LY-ALDRDPTAYALAE-HLSEL-----YP-----------KQIRAVLGQFSQAEALLTKA 156
Query: 217 GV-----DAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMD----PQASLKAEDILNSWP 267
GV D +LMDLG SSMQ++ PERGFS+ DGPLDMRMD P A D++N+
Sbjct: 157 GVQPGTFDGVLMDLGCSSMQLDTPERGFSLRKDGPLDMRMDGGRYPDMP-TAADVVNALD 215
Query: 268 DAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTP--GMRGRR---Q 322
+ +LR YGEE + + + IVQAR + T +L ++ P + R+ Q
Sbjct: 216 QPALASILRTYGEEKHARKIASAIVQARSIYPITRTQQLASIVAGAFPPSAIYARKDLLQ 275
Query: 323 GWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLS 382
AT+ FQALRI VN+EL L + L L PGGRL +SFHSLEDRI+K+ L
Sbjct: 276 RSTHIATKTFQALRIFVNNELNELYTGLKTAQKFLRPGGRLVALSFHSLEDRIIKRFLLG 335
Query: 383 IIDHNREDAEGNEEELRNIR----DDNINETWIRQIIQGWNGKILTKRPITPSAEEERLN 438
I R + ++ ++ + +N E +R+ W +++ K+ ++P ++ + N
Sbjct: 336 ISMTERFNLSVRQQVMKTSQLGSGHENTEEVSMRRAPLMW--ELIHKKVLSPQDQDVQDN 393
Query: 439 CRCRSAKLRVIQKI 452
R RSAKLR K+
Sbjct: 394 PRGRSAKLRAAVKL 407
>gi|259503028|ref|ZP_05745930.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Lactobacillus antri DSM 16041]
gi|259168894|gb|EEW53389.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Lactobacillus antri DSM 16041]
Length = 317
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/338 (37%), Positives = 174/338 (51%), Gaps = 28/338 (8%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
+H+ V+L E + + R ++VD TLG GH+SAI+ L+ D D +A+
Sbjct: 7 NHVTVLLKEAVAGLNI-RPTGTYVDGTLGGGGHTSAILGQLTTGHLY-SFDQDETAIDYN 64
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
R LN + K NFRH++ L + R VD +L DLG+SS Q ++
Sbjct: 65 RDQLNDAIAAG-----KLTLVEDNFRHLQQALAA--HGVRR--VDGVLYDLGVSSPQFDD 115
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
+RGFS D PLDMRM+ SL A +++N WP + R+L YGEE + KI Q
Sbjct: 116 AQRGFSYKLDAPLDMRMNQDQSLSAMEVVNEWPYERLVRILYRYGEERFAKQIARKIEQR 175
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R R + +T ELVD+I+ P RR G A + FQA+RIAVNDEL LE SL
Sbjct: 176 RQREPIRTTFELVDVIKEAIPAA-ARRHGG-HPAKKSFQAVRIAVNDELGALEESLEQAL 233
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
L GGR+ VI+F SLEDR+VK F E ++ D +
Sbjct: 234 AMLTVGGRISVITFQSLEDRLVKTLF---------------REKSSLSADLPQGLPVIPA 278
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ K++ ++PI PSA+E N R SAKLR+I+KI
Sbjct: 279 GMSPDFKLINRKPILPSAQELAANHRAHSAKLRIIEKI 316
>gi|226224647|ref|YP_002758754.1| hypothetical protein Lm4b_02062 [Listeria monocytogenes serotype 4b
str. CLIP 80459]
gi|254854022|ref|ZP_05243370.1| S-adenosyl-methyltransferase MraW [Listeria monocytogenes FSL
R2-503]
gi|254933469|ref|ZP_05266828.1| S-adenosyl-methyltransferase MraW [Listeria monocytogenes HPB2262]
gi|300765476|ref|ZP_07075457.1| S-adenosyl-methyltransferase MraW [Listeria monocytogenes FSL
N1-017]
gi|386732784|ref|YP_006206280.1| 16S rRNA m(4)C1402 methyltransferase [Listeria monocytogenes
07PF0776]
gi|404281655|ref|YP_006682553.1| S-adenosyl-methyltransferase [Listeria monocytogenes SLCC2755]
gi|404287466|ref|YP_006694052.1| S-adenosyl-methyltransferase [Listeria monocytogenes serotype 7
str. SLCC2482]
gi|405750396|ref|YP_006673862.1| S-adenosyl-methyltransferase [Listeria monocytogenes ATCC 19117]
gi|405756213|ref|YP_006679677.1| S-adenosyl-methyltransferase [Listeria monocytogenes SLCC2540]
gi|406704829|ref|YP_006755183.1| S-adenosyl-methyltransferase [Listeria monocytogenes L312]
gi|424823811|ref|ZP_18248824.1| Ribosomal RNA small subunit methyltransferase H [Listeria
monocytogenes str. Scott A]
gi|263456339|sp|C1KWZ4.1|RSMH_LISMC RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|225877109|emb|CAS05821.1| Hypothetical protein of unknown function [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|258607414|gb|EEW20022.1| S-adenosyl-methyltransferase MraW [Listeria monocytogenes FSL
R2-503]
gi|293585031|gb|EFF97063.1| S-adenosyl-methyltransferase MraW [Listeria monocytogenes HPB2262]
gi|300513787|gb|EFK40853.1| S-adenosyl-methyltransferase MraW [Listeria monocytogenes FSL
N1-017]
gi|332312491|gb|EGJ25586.1| Ribosomal RNA small subunit methyltransferase H [Listeria
monocytogenes str. Scott A]
gi|384391542|gb|AFH80612.1| 16S rRNA m(4)C1402 methyltransferase [Listeria monocytogenes
07PF0776]
gi|404219596|emb|CBY70960.1| S-adenosyl-methyltransferase [Listeria monocytogenes ATCC 19117]
gi|404225413|emb|CBY76775.1| S-adenosyl-methyltransferase [Listeria monocytogenes SLCC2540]
gi|404228290|emb|CBY49695.1| S-adenosyl-methyltransferase [Listeria monocytogenes SLCC2755]
gi|404246395|emb|CBY04620.1| S-adenosyl-methyltransferase [Listeria monocytogenes serotype 7
str. SLCC2482]
gi|406361859|emb|CBY68132.1| S-adenosyl-methyltransferase [Listeria monocytogenes L312]
Length = 312
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 129/340 (37%), Positives = 175/340 (51%), Gaps = 36/340 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D+ + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 4 HETVLLHETVDMLEV-KPDGIYVDATLGGAGHSEYLLNKLNEKGHLFAFDQDQTAIDNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L + TF K NFR +K L + I VD IL DLG+SS Q++
Sbjct: 63 IKLAD--------YSDKVTFIKANFRDMKEALNE--RGI--EAVDGILYDLGVSSPQLDE 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS D LDMRMD + L A+ ++N W ++ R+ +YGEE + +I +
Sbjct: 111 RERGFSYHQDAALDMRMDQEQELTAKIVVNEWSYQDLIRIFFQYGEEKFSKQIAREIERR 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +TGELVD+I++ P R+ G R FQA+RIAVNDEL +E SL
Sbjct: 171 REVKPIETTGELVDIIKTAIPAPARRKGGH--PGKRTFQAIRIAVNDELGAVEDSLEKAL 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNINETWIR 412
L PGGR+ VI+FHSLEDRI K F +E +G + L I D+
Sbjct: 229 TLLKPGGRISVITFHSLEDRITKHLF-------QEATKGPDLPPGLPVIPDE-------- 273
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ K+ T++PI PS EE N R RSAKLRVI+KI
Sbjct: 274 ---YKPDFKLATRKPIVPSEEELEQNNRARSAKLRVIEKI 310
>gi|406592218|ref|YP_006739398.1| S-adenosyl-methyltransferase MraW [Chlamydia psittaci CP3]
gi|406594631|ref|YP_006741527.1| S-adenosyl-methyltransferase MraW [Chlamydia psittaci MN]
gi|410858341|ref|YP_006974281.1| putative S-adenosyl-methyltransferase [Chlamydia psittaci 01DC12]
gi|405783063|gb|AFS21811.1| S-adenosyl-methyltransferase MraW [Chlamydia psittaci MN]
gi|405788090|gb|AFS26833.1| S-adenosyl-methyltransferase MraW [Chlamydia psittaci CP3]
gi|410811236|emb|CCO01881.1| putative S-adenosyl-methyltransferase [Chlamydia psittaci 01DC12]
Length = 298
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/338 (35%), Positives = 171/338 (50%), Gaps = 49/338 (14%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
SHIPV++ E L +F++ R F D T+GA GH+ A + +P + + D D +AL+ A
Sbjct: 6 SHIPVLVNECLSLFAN-RNPKFFCDVTVGAGGHAEAFLSEYPSIVSYDASDRDSAALSLA 64
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+ L + H FRH + + ++ D IL DLG+SSMQ++N
Sbjct: 65 KERLEKF-GDRVH-----------FRH--ASFEDLSKDSKEHVYDGILADLGVSSMQLDN 110
Query: 235 PERGFSVLGDG-PLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
RGFS GD LDMRMD + A ++LN+ + E+G++ REYGEE W + + +V
Sbjct: 111 LSRGFSFQGDDHDLDMRMDVTKGITASEVLNTLREEELGKIFREYGEEPQWKNVASAVVH 170
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
R R + + +L D V P R R++ I T +FQALR+ VN E L+ L +
Sbjct: 171 FRKRKKIITVRDLKDATAKVFPSYRLRKK--IHPLTLIFQALRVYVNHEDLQLKVFLESA 228
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
LAPGGRL +ISF S EDR+VK F R+
Sbjct: 229 MRWLAPGGRLIIISFCSSEDRLVKWFF-------------------------------RE 257
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ G ILTK+ + P+ EE R N RCRSAKLR +K
Sbjct: 258 AEKSGLGTILTKKVVMPTYEETRKNPRCRSAKLRCFEK 295
>gi|418004980|ref|ZP_12644981.1| rRNA small subunit methyltransferase H [Lactobacillus casei UW1]
gi|410548108|gb|EKQ22324.1| rRNA small subunit methyltransferase H [Lactobacillus casei UW1]
Length = 326
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/317 (38%), Positives = 171/317 (53%), Gaps = 30/317 (9%)
Query: 136 SFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTF 195
++VD TLG GH+ I+ +L I D D +A+A A +L H
Sbjct: 25 TYVDATLGRGGHTRQILNQLTTGRL-IAFDQDEAAIATVTADFGTLPKQLTLVH------ 77
Query: 196 AKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQA 255
+NFR + L + + VD IL DLG+SS Q ++ +RGFS D PLDMRMD +
Sbjct: 78 -RNFRDLTDALTTLGI----TEVDGILYDLGVSSPQFDDSKRGFSYRFDAPLDMRMDQRQ 132
Query: 256 SLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTP 315
+L A+ I+N WP A++ R+ YGEE + +I QAR + +T +LV+LI++ P
Sbjct: 133 TLDAKTIVNEWPYADLVRIFSRYGEEHFSKQIARRIEQARTVQPITTTFQLVELIKAGIP 192
Query: 316 GMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRI 375
+ RR G A +VFQA+RIAVNDEL LESSL + GGR+ VI+F SLEDR+
Sbjct: 193 A-KARRTGG-HPAKKVFQAIRIAVNDELSALESSLEQALKLINVGGRISVITFQSLEDRL 250
Query: 376 VKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEE 435
VK F +E+ +++D I Q N +++ ++PI PS EE
Sbjct: 251 VKTMF---------------KEVSSVQDVPRGLPVIPASAQP-NYRLVNRKPILPSEEEL 294
Query: 436 RLNCRCRSAKLRVIQKI 452
+N R SAKLRVI+K
Sbjct: 295 AVNHRAHSAKLRVIEKF 311
>gi|47093593|ref|ZP_00231351.1| S-adenosyl-methyltransferase MraW [Listeria monocytogenes str. 4b
H7858]
gi|417315695|ref|ZP_12102368.1| 16S rRNA m(4)C1402 methyltranserfase [Listeria monocytogenes J1816]
gi|47018017|gb|EAL08792.1| S-adenosyl-methyltransferase MraW [Listeria monocytogenes str. 4b
H7858]
gi|328466075|gb|EGF37248.1| 16S rRNA m(4)C1402 methyltranserfase [Listeria monocytogenes J1816]
Length = 312
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 129/340 (37%), Positives = 175/340 (51%), Gaps = 36/340 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D+ + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 4 HETVLLHETVDMLEV-KPDGIYVDATLGGAGHSEYLLNKLNEKGHLFAFDQDQTAINNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L + TF K NFR +K L + I VD IL DLG+SS Q++
Sbjct: 63 IKLAD--------YSDKVTFIKANFRDMKEALNE--RGI--EAVDGILYDLGVSSPQLDE 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS D LDMRMD + L A+ ++N W ++ R+ +YGEE + +I +
Sbjct: 111 RERGFSYHQDAALDMRMDQEQELTAKIVVNEWSYQDLIRIFFQYGEEKFSKQIAREIERR 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +TGELVD+I++ P R+ G R FQA+RIAVNDEL +E SL
Sbjct: 171 REVKPIETTGELVDIIKTAIPAPARRKGGH--PGKRTFQAIRIAVNDELGAVEDSLEKAL 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNINETWIR 412
L PGGR+ VI+FHSLEDRI K F +E +G + L I D+
Sbjct: 229 TLLKPGGRISVITFHSLEDRITKHLF-------QEATKGPDLPPGLPVIPDE-------- 273
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ K+ T++PI PS EE N R RSAKLRVI+KI
Sbjct: 274 ---YKPDFKLATRKPIVPSEEELEQNNRARSAKLRVIEKI 310
>gi|229815097|ref|ZP_04445434.1| hypothetical protein COLINT_02139 [Collinsella intestinalis DSM
13280]
gi|229809327|gb|EEP45092.1| hypothetical protein COLINT_02139 [Collinsella intestinalis DSM
13280]
Length = 325
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 134/341 (39%), Positives = 181/341 (53%), Gaps = 35/341 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H PVML EVL+ + + DCTLG AGHS + L +GVD D ALA A
Sbjct: 16 HEPVMLQEVLEQLQL-KPGSVVCDCTLGGAGHSVRMAERVGSEGLLLGVDQDDMALAAAG 74
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRS---GVDAILMDLGMSSMQV 232
L++ H LK NF G +DE + + GVD L DLG+SS Q+
Sbjct: 75 KRLDAEAPDTPHKLLKG-----NF-------GDLDELLCSAQVPGVDGFLFDLGVSSPQL 122
Query: 233 NNPERGFSVLGDGPLDMRMDPQA-SLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
+ P RGFS D PLDMRMDP +L A ++LN++ +A++ R+LR YGEE + ++
Sbjct: 123 DIPGRGFSYNEDAPLDMRMDPGTNTLNAAEVLNTYTEADLARILRIYGEEKFARQIAREV 182
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
V+ R L STG+ VD I++ P RR G A R FQA+RI VN EL LE L
Sbjct: 183 VRRRQESPLVSTGDFVDAIKAGIPAA-ARRHGG-HPAKRSFQAIRIEVNHELDVLERGLE 240
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
A L PGGR+ VIS+HSLEDRIVK+ F +E ++G D +
Sbjct: 241 AAIRWLNPGGRVCVISYHSLEDRIVKRLF-------QELSKG----CTCPPDIPVCVCGN 289
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
I+ K+ T++P+ +AEE N R RSAK+R +++
Sbjct: 290 VPIV-----KVTTRKPLVATAEEVERNPRARSAKIRCAERL 325
>gi|375094862|ref|ZP_09741127.1| S-adenosyl-methyltransferase MraW [Saccharomonospora marina XMU15]
gi|374655595|gb|EHR50428.1| S-adenosyl-methyltransferase MraW [Saccharomonospora marina XMU15]
Length = 401
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 133/361 (36%), Positives = 183/361 (50%), Gaps = 34/361 (9%)
Query: 94 KRRTRSNKDYDYESIIQQQQSSHIPVMLGEVLDVFSSSRTITS--FVDCTLGAAGHSSAI 151
K R RS ++Y + H+PV+L VL++ + T VD T+G GH+ A+
Sbjct: 69 KPRPRSPREY-RPGVTVTGNGEHVPVLLDRVLELLEPALTGPEPVLVDATVGLGGHADAL 127
Query: 152 IRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDE 211
+ A+P L+L IG+D D AL + L HG + + + VL ++
Sbjct: 128 LTANPSLRL-IGLDRDRDALRDSGQRLAR--HGD-----RVRLVHAVYDRMPDVLAELG- 178
Query: 212 NILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEV 271
S VDA+LMDLG+SSMQ++ ERGF+ D PLDMRMDP A L A D+LN++ A++
Sbjct: 179 ---LSHVDAVLMDLGVSSMQLDRQERGFAYARDAPLDMRMDPAAGLTAADVLNTYSVADL 235
Query: 272 GRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRV 331
RVLR+YGEE + + +V R R + LV L+ P RR G A R
Sbjct: 236 TRVLRDYGEERFANRIAKAVVAEREREPFDRSERLVRLLYDTVPAP-SRRTGG-HPAKRT 293
Query: 332 FQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDA 391
FQALRI VN EL+TL ++L A + L GGR+ V S+HSLEDRIVK+ F
Sbjct: 294 FQALRIEVNAELETLRAALPAAIELLTGGGRIVVESYHSLEDRIVKREFAGRAASR--TP 351
Query: 392 EGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+G EL G ++LT+ S EE N R S +LR +K
Sbjct: 352 QGLPVELPG---------------HGPELRLLTRGAEKASEEEIERNPRAASVRLRAAEK 396
Query: 452 I 452
I
Sbjct: 397 I 397
>gi|421453127|ref|ZP_15902483.1| 16S rRNA (cytosine-N(4))-methyltransferase [Streptococcus
salivarius K12]
gi|400181436|gb|EJO15703.1| 16S rRNA (cytosine-N(4))-methyltransferase [Streptococcus
salivarius K12]
Length = 334
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 128/355 (36%), Positives = 186/355 (52%), Gaps = 38/355 (10%)
Query: 103 YDYESI-IQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLH 161
Y Y I + + H+ V+L E +D+ + +VD TLG AGHSS ++ E
Sbjct: 11 YSYAIIKVMTNEFHHVTVLLHETVDMLDI-KPDGIYVDATLGGAGHSSYLLSQLSEKGHL 69
Query: 162 IGVDVDPSALAKARAHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVD 219
D D A+ A+ L + G TF K NFR++KS L E + S +D
Sbjct: 70 YCFDQDQKAIDNAQVRLKDYIDKGMV-------TFIKDNFRNLKSNL----EALGVSEID 118
Query: 220 AILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYG 279
IL DLG+SS Q++ ERGFS D LDMRM+ +ASL A D++N++P ++ R+ +YG
Sbjct: 119 GILYDLGVSSPQLDERERGFSYKQDAKLDMRMNEEASLTAYDVVNTYPYNDLVRIFFKYG 178
Query: 280 EESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAV 339
E+ + KI QAR + +T EL ++I+S P +++G A ++FQA+RI V
Sbjct: 179 EDKFSKQIARKIEQARQVKPIETTTELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEV 236
Query: 340 NDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTF--LSIIDHNREDAEGNEEE 397
NDEL + S+ D LA GR+ VI+FHSLEDR+ KQ F S +D +
Sbjct: 237 NDELGAADESIQEALDLLAVDGRISVITFHSLEDRLTKQLFKEASTVDVPK--------- 287
Query: 398 LRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+I + +Q ++ ++PI PS EE N R SAKLRV +KI
Sbjct: 288 ---------GLPFIPEDLQPKVA-LVNRKPILPSQEELEANNRSHSAKLRVAKKI 332
>gi|91200077|emb|CAJ73120.1| similar to S-adenosyl-dependent methyltransferase [Candidatus
Kuenenia stuttgartiensis]
Length = 299
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 129/340 (37%), Positives = 179/340 (52%), Gaps = 53/340 (15%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAII-RAHPELKLHIGVDVDPSALAKA 174
H PVM+ EVL+ + + + +DCT+G GH+ I+ R P+ L IG+D D L
Sbjct: 10 HEPVMVDEVLE-YLCLQPGSIILDCTVGGGGHAGKIMDRIKPDGCL-IGIDKDFDMLNMT 67
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQ--IDENILRSGVDAILMDLGMSSMQV 232
+ L+ + P H ++ VL Q ID GV +L+DLG SS+Q
Sbjct: 68 KECLSD----RGCPFKLYHA---DYVDADEVLRQAGID------GVHGVLLDLGASSLQF 114
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
++ ERGFS +GPLDMRMD AS A+D+L + ++ +L++YGEE + +I+
Sbjct: 115 DSAERGFSFSKEGPLDMRMDRTASFMAQDLLRKISERDLQALLKKYGEERWSKRIARRII 174
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
+ R GL ST +L +I+ P MR R I ATRVFQALRIAVN EL++LE L+
Sbjct: 175 KERSVSGLKSTTQLARIIERAVPSMRHR----IHPATRVFQALRIAVNKELESLEKFLNK 230
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
+ G R+ VISFHSLEDRIVK +F+ + D N
Sbjct: 231 IHFSMVKGARIAVISFHSLEDRIVKNSFIEMEDKN------------------------- 265
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
I I+TK+P+ P A E N R RSAKLRV ++I
Sbjct: 266 -IFH-----IITKKPLRPGASEIERNARSRSAKLRVAERI 299
>gi|421848807|ref|ZP_16281793.1| methyltransferase MraW [Acetobacter pasteurianus NBRC 101655]
gi|371460327|dbj|GAB26996.1| methyltransferase MraW [Acetobacter pasteurianus NBRC 101655]
Length = 335
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 127/339 (37%), Positives = 179/339 (52%), Gaps = 33/339 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHI-GVDVDPSALAKA 174
HIPVML EVL+ + +DCT G G+SSAI+++ ++ G+D DP A+A+
Sbjct: 16 HIPVMLAEVLEYLHPADG-ERILDCTFGGGGYSSAILKS---TDCNVWGIDRDPDAIARG 71
Query: 175 RAHLNSL--LHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
+ + G + HL +F N + S G S D I++DLG+SS Q+
Sbjct: 72 QVLSRTFPTADGGSRLHLLQGSFG-NMLALASAAGI-------STFDGIVLDLGVSSFQL 123
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ +RGFS +GPLDMRM+ ++ A DI+N P+AE+ + YGEE + L +V
Sbjct: 124 DEADRGFSFRMEGPLDMRME-KSGPSAADIVNKAPEAELADIFHFYGEERHARRLARAVV 182
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
AR +T +L DL++SV P + + I +ATR FQ LRIAVNDEL +E L
Sbjct: 183 NARSEAPFQTTTQLADLVRSVIP----KDRSGIDSATRAFQGLRIAVNDELGEIERGLEQ 238
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
D LAPGGRL V+SFHSLEDRI K+ ++ H A G ++ D T
Sbjct: 239 ALDMLAPGGRLVVVSFHSLEDRIAKR----MVQH----ATGKDKSFSRY-DPRAAGTPAP 289
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ + LT + PS E N R RSA+LR + K
Sbjct: 290 ET----DFVALTHKARRPSDTECSHNPRARSARLRAVMK 324
>gi|431446012|ref|ZP_19513694.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1630]
gi|430585656|gb|ELB23928.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1630]
Length = 319
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 130/341 (38%), Positives = 179/341 (52%), Gaps = 37/341 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHI-GVDVDPSALAKA 174
H VML E +D + + +VDCTLG AGHS ++ + K H+ D D A+ A
Sbjct: 7 HYTVMLKETVDGLNI-KPDGVYVDCTLGGAGHSEYLL-SQLSSKGHLYAFDQDQKAIDHA 64
Query: 175 RAHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQ-IDENILRSGVDAILMDLGMSSMQ 231
+ L S + G TF K NFR ++ L + +D+ VD IL DLG+SS Q
Sbjct: 65 KLRLASYVEQGMV-------TFIKANFRELEERLSEHVDK------VDGILYDLGVSSPQ 111
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ ERGFS D PLDMRMD A L A ++N + E+ ++ YGEE + +I
Sbjct: 112 LDEAERGFSYHQDAPLDMRMDQSAPLSAYHVINEYSYHELVKIFFRYGEEKFSKQIAREI 171
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
+ R + +TGELV++I+ V P R+ G A R+FQA+RIAVNDEL E+SL
Sbjct: 172 ERVRKTKRIQTTGELVEIIKQVIPAPARRKGGH--PAKRIFQAVRIAVNDELGAEEASLE 229
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
L GR+ VI+FHSLEDRIVK F +E ++D +
Sbjct: 230 QAIRLLKVNGRISVITFHSLEDRIVKSMF---------------KEYSTVQDLPPGLPVV 274
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
Q K++T++PI PS EE N R RSAKLR+ +KI
Sbjct: 275 PDEFQP-ELKVITRKPILPSEEELAENNRSRSAKLRIAEKI 314
>gi|340756948|ref|ZP_08693552.1| ribosomal RNA small subunit methyltransferase H [Fusobacterium
varium ATCC 27725]
gi|251834213|gb|EES62776.1| ribosomal RNA small subunit methyltransferase H [Fusobacterium
varium ATCC 27725]
Length = 313
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 119/349 (34%), Positives = 179/349 (51%), Gaps = 40/349 (11%)
Query: 106 ESIIQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVD 165
E II + HIPV+ E +D ++ ++DCTLG GHS I++ E I +D
Sbjct: 2 EEIISEY---HIPVLYRESIDNLVINKD-GIYLDCTLGGGGHSEGILKELSEKGRLISID 57
Query: 166 VDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDL 225
D A+ A+ L +G K F NF ++ +V+ + +D ILMD+
Sbjct: 58 QDQQAIDFAKKRLEK--YGN-----KWQVFKNNFENLDTVIYMAGYD----KIDGILMDI 106
Query: 226 GMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWH 285
G+SS Q+++PERGFS D LDMRM+ SL A +++N + + + ++L EYGEE N
Sbjct: 107 GVSSTQLDDPERGFSYRYDTKLDMRMNQNNSLSAYEVVNEYSEEALMKILFEYGEERNSR 166
Query: 286 LLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKT 345
+ I +AR + +TGELV +I+ P + A + FQA+RI VN EL+
Sbjct: 167 RIAKFICEAREIKKIETTGELVAIIKRAYPERAAKH-----PAKKTFQAIRIEVNRELEV 221
Query: 346 LESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDN 405
LE ++ D L GGRLG+I+FHSLEDR+VK F +++
Sbjct: 222 LEKAIDKAVDSLKIGGRLGIITFHSLEDRLVKTKF------------------KDLATAC 263
Query: 406 INETWIRQIIQGWNGKI--LTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ + G K+ +TK+PI P E N R S+KLRV+++I
Sbjct: 264 KCPPGLPICVCGGKAKVKLITKKPIIPEGNEVEFNNRAHSSKLRVVERI 312
>gi|422759605|ref|ZP_16813367.1| S-adenosyl-methyltransferase MraW [Streptococcus dysgalactiae
subsp. dysgalactiae ATCC 27957]
gi|322412440|gb|EFY03348.1| S-adenosyl-methyltransferase MraW [Streptococcus dysgalactiae
subsp. dysgalactiae ATCC 27957]
Length = 337
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 124/348 (35%), Positives = 189/348 (54%), Gaps = 37/348 (10%)
Query: 109 IQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDP 168
+ ++ H+ V+L E +D+ +VD TLG +GHS+ ++ E D D
Sbjct: 21 VMTKEFHHVTVLLHETVDMLDIKPN-GIYVDATLGGSGHSAYLLSKLSEQGHLYCFDQDQ 79
Query: 169 SALAKARAHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLG 226
A+ A+ L + GQ TF K NFRH+K+ L E + + +D IL DLG
Sbjct: 80 KAIDNAQLILKPYIDKGQV-------TFIKDNFRHLKARL----EALGVTEIDGILYDLG 128
Query: 227 MSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHL 286
+SS Q++ ERGFS + PLDMRMD QA L A D++N++P ++ ++ +YGE+
Sbjct: 129 VSSPQLDEKERGFSYKQNAPLDMRMDRQAPLTAYDVVNTYPFNDLVKIFFKYGEDKFSKQ 188
Query: 287 LQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTL 346
+ KI QAR + +T EL +LI++ P +++G A ++FQA+RI VNDEL
Sbjct: 189 IARKIEQARAIKPIETTTELAELIKAAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAA 246
Query: 347 ESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTF--LSIIDHNREDAEGNEEELRNIRDD 404
+ S+ + LA GR+ VI+FHSLEDR+ KQ F +S +D + L I +D
Sbjct: 247 DESIQDAMELLALDGRISVITFHSLEDRLTKQLFKEVSTVDVPK--------GLPFIPED 298
Query: 405 NINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++ I + +++++PI PS EE N R SAKLRV +KI
Sbjct: 299 ------MKPIFE-----LVSRKPILPSQEELAANNRAHSAKLRVAKKI 335
>gi|405983698|ref|ZP_11042003.1| S-adenosyl-methyltransferase MraW [Slackia piriformis YIT 12062]
gi|404388513|gb|EJZ83595.1| S-adenosyl-methyltransferase MraW [Slackia piriformis YIT 12062]
Length = 322
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 130/347 (37%), Positives = 184/347 (53%), Gaps = 37/347 (10%)
Query: 112 QQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
++ HIPV+L E L+ S+ +T +FVD TLG AGHSS + + + IG+D D
Sbjct: 6 KEYRHIPVLLSECLEQ-SNLKTHYTFVDATLGGAGHSSEVAQRLGSDGVLIGIDQD---- 60
Query: 172 AKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRS---GVDAILMDLGMS 228
+ G +L +T ++ G +DE +L + GVDA L DLG+S
Sbjct: 61 -----EMALAAAGARLRNLALNT-PPQIELLRGNFGNLDELLLEAETPGVDAFLFDLGVS 114
Query: 229 SMQVNNPERGFSVLGDGPLDMRMDP-QASLKAEDILNSWPDAEVGRVLREYGEESNWHLL 287
S Q++ P RGFS D PLDMRMDP + ++ A +++N+ +E+ RV+R+Y +E +
Sbjct: 115 SPQLDFPSRGFSFKEDSPLDMRMDPGKQTVTAAELINTLDASELTRVIRDYSDEKWASRI 174
Query: 288 QNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLE 347
IV++R + ++ +LV++I++ P RR G A R FQALRI VN EL L
Sbjct: 175 AQFIVESREHAPIETSSQLVEIIKAAIPA-SARRAGG-HPAKRTFQALRIEVNSELSVLR 232
Query: 348 SSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNIN 407
L A L PGGR+ VIS+HSLEDR+VK+ F H R
Sbjct: 233 KGLEAAVRWLNPGGRILVISYHSLEDRVVKEVFAK---HAR---------------TCTC 274
Query: 408 ETWIRQIIQGWNG--KILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ G N K+ T++PI PSAEE N R RSAKLRV +KI
Sbjct: 275 PPGLPVCACGANPVLKVRTRKPILPSAEEIENNPRARSAKLRVAEKI 321
>gi|387784816|ref|YP_006070899.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Streptococcus salivarius JIM8777]
gi|338745698|emb|CCB96064.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Streptococcus salivarius JIM8777]
Length = 316
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 125/341 (36%), Positives = 181/341 (53%), Gaps = 37/341 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG AGHSS ++ E D D A+ A+
Sbjct: 7 HVTVLLHETVDMLDI-KPDGIYVDATLGGAGHSSYLLSQLSEKGHLYCFDQDQKAIDNAQ 65
Query: 176 AHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
L + G TF K NFR++KS L E + S +D IL DLG+SS Q++
Sbjct: 66 VRLKDYIDKGMV-------TFIKDNFRNLKSNL----EAMGMSEIDGILYDLGVSSPQLD 114
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
ERGFS D LDMRM+ +ASL A D++N++P ++ R+ +YGE+ + KI Q
Sbjct: 115 ERERGFSYKQDAKLDMRMNEEASLTAYDVVNTYPYNDLVRIFFKYGEDKFSKQIARKIEQ 174
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +T EL ++I+S P +++G A ++FQA+RI VNDEL + S+
Sbjct: 175 ARQVKPIETTTELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADESIQEA 232
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTF--LSIIDHNREDAEGNEEELRNIRDDNINETWI 411
D LA GR+ VI+FHSLEDR+ KQ F S +D + +I
Sbjct: 233 LDLLAVDGRISVITFHSLEDRLTKQLFKEASTVDVPK------------------GLPFI 274
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ +Q ++ ++PI PS EE N R SAKLRV +KI
Sbjct: 275 PEDLQPKVA-LVNRKPILPSQEELEANNRSHSAKLRVAKKI 314
>gi|163854037|ref|YP_001642080.1| S-adenosyl-methyltransferase MraW [Methylobacterium extorquens PA1]
gi|263456431|sp|A9VW37.1|RSMH_METEP RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|163665642|gb|ABY33009.1| S-adenosyl-methyltransferase MraW [Methylobacterium extorquens PA1]
Length = 351
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 123/339 (36%), Positives = 182/339 (53%), Gaps = 32/339 (9%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
Q+ H+PV+L EVL S R + VD T GA G++ A++ A PE+++ I +D DP+A+
Sbjct: 17 QARHVPVLLAEVLAALSLDRPGLA-VDGTFGAGGYTRALLEAGPEVRV-IAIDRDPTAI- 73
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
+ A L + G + F + +++ DE D +++D+G+SSMQ+
Sbjct: 74 RGGADLVTASGG------RLRLVQGRFGDLDTLIADQDE----PQADWVVLDIGVSSMQI 123
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ +RGFS DGPLDMRM + A D++N + + +L +GEE + IV
Sbjct: 124 DEAQRGFSFRQDGPLDMRMGGEGP-SAADLVNGEEETTLADILYHFGEERRSRAVARAIV 182
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
+AR R + +T +L DL+ V +R I ATR FQ LRIAVNDEL L LHA
Sbjct: 183 EARRRAPIETTAQLADLVAGV---VRPEPGSPIHPATRSFQGLRIAVNDELGELVRGLHA 239
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
L PGGRL V++FHSLEDRIVKQ F + + A+ + R++ + +
Sbjct: 240 AERVLKPGGRLAVVTFHSLEDRIVKQFFSA---RSGRAAQAS----RHV--PGVERPAPK 290
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++TK P+ PS E +N R RSAKLR ++
Sbjct: 291 SF------KLVTKGPVLPSEAETDVNPRSRSAKLRAGER 323
>gi|431770067|ref|ZP_19558470.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1644]
gi|431774405|ref|ZP_19562713.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E2369]
gi|430634154|gb|ELB70289.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E2369]
gi|430635820|gb|ELB71899.1| ribosomal RNA small subunit methyltransferase H [Enterococcus
faecium E1644]
Length = 319
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 130/341 (38%), Positives = 179/341 (52%), Gaps = 37/341 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHI-GVDVDPSALAKA 174
H VML E +D + + +VDCTLG AGHS ++ + K H+ D D A+ A
Sbjct: 7 HYTVMLKETVDGLNI-KPDGVYVDCTLGGAGHSEYLL-SQLSSKGHLYAFDQDQKAIDHA 64
Query: 175 RAHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQ-IDENILRSGVDAILMDLGMSSMQ 231
+ L S + G TF K NFR ++ L + +D+ VD IL DLG+SS Q
Sbjct: 65 KLRLASYVEQGMV-------TFIKANFRELEERLSEHVDK------VDGILYDLGVSSPQ 111
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ ERGFS D PLDMRMD A L A ++N + E+ ++ YGEE + ++
Sbjct: 112 LDEAERGFSYHQDAPLDMRMDQSAPLSAYHVINEYSYHELVKIFFRYGEEKFSKQIAREM 171
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
+ R + +TGELV++I+ V P R+ G A R+FQA+RIAVNDEL E+SL
Sbjct: 172 ERVRKTKPIQTTGELVEIIKQVIPAPARRKGGH--PAKRIFQAVRIAVNDELGAEEASLE 229
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
L GR+ VI+FHSLEDRIVK F +E ++D I
Sbjct: 230 QAIRLLKVNGRISVITFHSLEDRIVKSMF---------------KEYSTVQDLPPGLPVI 274
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
Q K++T++PI PS EE N R RSAKLR+ +KI
Sbjct: 275 PDEFQP-ELKVITRKPILPSEEELTENNRSRSAKLRIAEKI 314
>gi|256384076|gb|ACU78646.1| S-adenosyl-methyltransferase MraW [Mycoplasma mycoides subsp. capri
str. GM12]
gi|256384908|gb|ACU79477.1| S-adenosyl-methyltransferase MraW [Mycoplasma mycoides subsp. capri
str. GM12]
gi|296455289|gb|ADH21524.1| S-adenosyl-methyltransferase MraW [synthetic Mycoplasma mycoides
JCVI-syn1.0]
Length = 308
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 125/341 (36%), Positives = 187/341 (54%), Gaps = 42/341 (12%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HIPV+L E ++ + + + +VDCTLG AGHSS I++ + +D D A+ +A+
Sbjct: 4 HIPVLLKESIE-YLNIKPDGIYVDCTLGRAGHSSEILKKLNQKGFLYAIDQDQIAIDQAK 62
Query: 176 AHL----NSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQ 231
L N+ L Q NF ++ ++L I+ VD IL DLG+SS Q
Sbjct: 63 EKLEQINNNFLLIQG-----------NFSNLSALLA-INHVF---NVDGILYDLGVSSPQ 107
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ RGFS DGPLDMRMD ++L A ++N++ ++++ +L +YGEES + KI
Sbjct: 108 IDIASRGFSYKMDGPLDMRMDLNSTLTAHQVINTYSESQISEILFKYGEESFSKSISKKI 167
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
V++R ++ST ELV++I+SV P +++ A + FQALRI +N+EL LE+SL
Sbjct: 168 VESR---PINSTLELVEIIKSVLPQKVLKQKKH--PAKKTFQALRIYINNELIALENSLK 222
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIR-DDNINETW 410
D L R+ VI+FHSLE++IVK F N E+ L N+ N+N +
Sbjct: 223 QALDLLNSKARICVITFHSLEEKIVKNIF------NNSTNYYQEQLLSNLPIKANLNSKF 276
Query: 411 IRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++ K+PI PS E N R SAKL VI+K
Sbjct: 277 ----------KLVIKKPIKPSLLELEQNHRSHSAKLWVIEK 307
>gi|258542962|ref|YP_003188395.1| S-adenosyl-methyltransferase MraW [Acetobacter pasteurianus IFO
3283-01]
gi|384042884|ref|YP_005481628.1| methytransferase MraW [Acetobacter pasteurianus IFO 3283-12]
gi|384051401|ref|YP_005478464.1| methytransferase MraW [Acetobacter pasteurianus IFO 3283-03]
gi|384054508|ref|YP_005487602.1| methytransferase MraW [Acetobacter pasteurianus IFO 3283-07]
gi|384057743|ref|YP_005490410.1| methytransferase MraW [Acetobacter pasteurianus IFO 3283-22]
gi|384060384|ref|YP_005499512.1| methytransferase MraW [Acetobacter pasteurianus IFO 3283-26]
gi|384063676|ref|YP_005484318.1| methytransferase MraW [Acetobacter pasteurianus IFO 3283-32]
gi|384119685|ref|YP_005502309.1| methytransferase MraW [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256634040|dbj|BAI00016.1| methytransferase MraW [Acetobacter pasteurianus IFO 3283-01]
gi|256637100|dbj|BAI03069.1| methytransferase MraW [Acetobacter pasteurianus IFO 3283-03]
gi|256640152|dbj|BAI06114.1| methytransferase MraW [Acetobacter pasteurianus IFO 3283-07]
gi|256643209|dbj|BAI09164.1| methytransferase MraW [Acetobacter pasteurianus IFO 3283-22]
gi|256646264|dbj|BAI12212.1| methytransferase MraW [Acetobacter pasteurianus IFO 3283-26]
gi|256649317|dbj|BAI15258.1| methytransferase MraW [Acetobacter pasteurianus IFO 3283-32]
gi|256652303|dbj|BAI18237.1| methytransferase MraW [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256655361|dbj|BAI21288.1| methytransferase MraW [Acetobacter pasteurianus IFO 3283-12]
Length = 335
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 127/339 (37%), Positives = 179/339 (52%), Gaps = 33/339 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHI-GVDVDPSALAKA 174
HIPVML EVL+ + +DCT G G+SSAI+++ ++ G+D DP A+A+
Sbjct: 16 HIPVMLAEVLEYLHPADG-ERILDCTFGGGGYSSAILKS---ADCNVWGIDRDPDAIARG 71
Query: 175 RAHLNSL--LHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
+ + G + HL +F N + S G S D I++DLG+SS Q+
Sbjct: 72 QVLSRTFPTADGGSRLHLLQGSFG-NMLALASAAGI-------STFDGIVLDLGVSSFQL 123
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ +RGFS +GPLDMRM+ ++ A DI+N P+AE+ + YGEE + L +V
Sbjct: 124 DEADRGFSFRMEGPLDMRME-KSGPSAADIVNKAPEAELADIFHFYGEERHARRLARAVV 182
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
AR +T +L DL++SV P + + I +ATR FQ LRIAVNDEL +E L
Sbjct: 183 NARSEAPFQTTTQLADLVRSVIP----KDRSGIDSATRAFQGLRIAVNDELGEIERGLEQ 238
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
D LAPGGRL V+SFHSLEDRI K+ ++ H A G ++ D T
Sbjct: 239 ALDMLAPGGRLVVVSFHSLEDRIAKR----MVQH----ATGKDKSFSRY-DPRAAGTPAP 289
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ + LT + PS E N R RSA+LR + K
Sbjct: 290 ET----DFVALTHKARRPSDTECSHNPRARSARLRAVMK 324
>gi|433450863|ref|ZP_20412719.1| S-adenosyl-methyltransferase MraW [Mycoplasma sp. G5847]
gi|431933810|gb|ELK20369.1| S-adenosyl-methyltransferase MraW [Mycoplasma sp. G5847]
Length = 308
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 125/340 (36%), Positives = 188/340 (55%), Gaps = 40/340 (11%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HIPV+L E + + + + +VDCTLG AGHSS I++ + +D D A+ +A+
Sbjct: 4 HIPVLLEESIK-YLNIKPDGIYVDCTLGRAGHSSEILKQLNQKGFLYAIDQDQIAIEQAK 62
Query: 176 AHL----NSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQ 231
L N+ L Q NF ++ ++L N+ VD IL DLG+SS Q
Sbjct: 63 EKLEKISNNFLLIQG-----------NFSNLSALLAI--NNVF--NVDGILYDLGVSSPQ 107
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ P RGFS DGPLDMRMD SL A +++N++ +A++ +L +YGEES + KI
Sbjct: 108 IDIPSRGFSYKLDGPLDMRMDTNTSLTAYEVINNYSEAQISEILFKYGEESFSKSISKKI 167
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
V++R ++ST +LV++I+S P +++ A + FQALRI VN+EL LE+SL
Sbjct: 168 VESR---PINSTLQLVEVIRSALPQKVLKQKK--HPAKKTFQALRIYVNNELIVLENSLK 222
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
D L R+ VI+FHSLE++IVK F + ++ +E N I+ D +N +
Sbjct: 223 QALDLLNSKARICVITFHSLEEKIVKNIFNNSTNYFQEQLLSN----LPIKAD-LNSKF- 276
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+++ K+PI PS E N R SAKL VI+K
Sbjct: 277 ---------RLVIKKPIKPSLLELEKNHRSHSAKLWVIEK 307
>gi|46199019|ref|YP_004686.1| S-adenosyl-methyltransferase MraW [Thermus thermophilus HB27]
gi|85701363|sp|P62476.1|RSMH_THET2 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|46196643|gb|AAS81059.1| mraW protein [Thermus thermophilus HB27]
Length = 285
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 126/338 (37%), Positives = 177/338 (52%), Gaps = 61/338 (18%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
+H+PV+ E LD+ + R +VD TLG AGH+ I+ + IG+D DP A+A+A
Sbjct: 5 THVPVLYQEALDLLAV-RPGGVYVDATLGGAGHARGILERGGRV---IGLDQDPEAVARA 60
Query: 175 RA-HLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
+ HL L Q NFRH+K L + + R VD IL DLG+SS ++
Sbjct: 61 KGLHLPGLTVVQG-----------NFRHLKRHLAAL--GVER--VDGILADLGVSSFHLD 105
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
+P RGFS +GPLDMRM + A++++N P + R+LRE GEE + + IV
Sbjct: 106 DPSRGFSYQKEGPLDMRMGLEGP-TAKEVVNRLPLEALARLLRELGEEPQAYRIARAIVA 164
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + + +T +L ++++ G R R G A + FQALRI VNDEL L+ L
Sbjct: 165 AREKAPIETTTQLAEIVRKAV-GFR--RAGH--PARKTFQALRIYVNDELNALKEFLEQA 219
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
+ LAP GRL VI+FHSLEDR+VK R +R+ +
Sbjct: 220 AEVLAPRGRLVVIAFHSLEDRVVK---------------------RFLRESGL------- 251
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K+LTK+P+ PS +E N R RSAKLR +K
Sbjct: 252 -------KVLTKKPLVPSEKEAAQNPRARSAKLRAAEK 282
>gi|383820021|ref|ZP_09975281.1| 16S rRNA m(4)C1402 methyltransferase [Mycobacterium phlei
RIVM601174]
gi|383335841|gb|EID14262.1| 16S rRNA m(4)C1402 methyltransferase [Mycobacterium phlei
RIVM601174]
Length = 332
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/292 (39%), Positives = 156/292 (53%), Gaps = 30/292 (10%)
Query: 98 RSNKDYDYESIIQQQQSSHIPVMLGEVLDVFSSSRTITS-------FVDCTLGAAGHSSA 150
RS DY HIPV+L +++ + + T S VD TLGA GH+
Sbjct: 4 RSGDDY-----------GHIPVLLDRCVELLTPALTRRSPDGDGAVLVDATLGAGGHAER 52
Query: 151 IIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQID 210
+ P+L+L IG+D DP AL A L + + I VLG+
Sbjct: 53 FLTELPKLRL-IGLDRDPDALWIAGERLAPFAD-------RVTVVRTRYDGIGRVLGETG 104
Query: 211 --ENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPD 268
R V +L DLG+SSMQ++ PERGFS D PLDMRMDP A+L A D+LN++
Sbjct: 105 FYAGEERLPVMGVLFDLGVSSMQLDRPERGFSYAADAPLDMRMDPDATLTAADVLNTYDQ 164
Query: 269 AEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTA 328
+ R+L+++GEE + IV+ R +TGELV+L+ P RR G A
Sbjct: 165 KAIARLLKDFGEERFAGRIAAHIVKRRAVRPFRTTGELVELLYDAIPAP-ARRTGG-HPA 222
Query: 329 TRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTF 380
R FQALRIAVN EL +L ++L A + LAPGGR+ V+++ SLEDRIVK F
Sbjct: 223 KRTFQALRIAVNGELDSLRAALPAAMEALAPGGRIVVMAYQSLEDRIVKSVF 274
>gi|239636344|ref|ZP_04677346.1| S-adenosyl-methyltransferase MraW [Staphylococcus warneri L37603]
gi|445059901|ref|YP_007385305.1| 16S rRNA m(4)C1402 methyltransferase [Staphylococcus warneri SG1]
gi|239597699|gb|EEQ80194.1| S-adenosyl-methyltransferase MraW [Staphylococcus warneri L37603]
gi|443425958|gb|AGC90861.1| 16S rRNA m(4)C1402 methyltransferase [Staphylococcus warneri SG1]
Length = 311
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 121/335 (36%), Positives = 178/335 (53%), Gaps = 30/335 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI VML E +D + + + +VDCTLG AGH+ ++ + I +D D +A+ A+
Sbjct: 4 HISVMLNETID-YLNIKEDGVYVDCTLGGAGHALYLLNQLSDEGRLIAIDQDLTAIENAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L LH H NFR + +L ++ NI VD I DLG+SS Q++ P
Sbjct: 63 DVLKEHLHKVTFIH-------SNFRELTQILNEL--NI--EKVDGIYYDLGVSSPQLDVP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D LDMRMD SL A +++N WP + ++ YGEE + +I R
Sbjct: 112 ERGFSYHHDAKLDMRMDQTQSLSAYEVVNEWPYEALVKIFYRYGEEKFSKQIARRIEANR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +T ELV++I+ P + RR+G A RVFQA+RIAVNDEL E S+ +
Sbjct: 172 EKQPIETTLELVEVIKEGIPA-KARRKGG-HPAKRVFQAIRIAVNDELSAFEDSIEQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
+ GR+ VI+FHSLEDR+ KQ F ++ E + R + I E + ++
Sbjct: 230 LVKVNGRISVITFHSLEDRLCKQMF--------QEYEKGPDVPRGL--PVIPEAYTPKL- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
K + ++PIT + E+ N R RSAKLR+ +
Sbjct: 279 -----KRVNRKPITATDEDLDDNNRARSAKLRIAE 308
>gi|397520758|ref|XP_003830478.1| PREDICTED: probable methyltransferase-like protein 15 isoform 1
[Pan paniscus]
Length = 407
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 128/371 (34%), Positives = 197/371 (53%), Gaps = 41/371 (11%)
Query: 100 NKDYDYESIIQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELK 159
++D D+E++ + HIPVM+ EV+ S + F+D T G+ GH+ AI++ ++
Sbjct: 60 SQDRDFETMAK----LHIPVMVDEVVHCLSPQKG-QIFLDMTFGSGGHTKAILQKESDIV 114
Query: 160 LHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGV- 218
L+ +D DP+A A A HL+ L + K R + Q + ++++GV
Sbjct: 115 LY-ALDRDPTAYALAE-HLSEL-------------YPKQIRAMLGQFSQAEALLMKAGVQ 159
Query: 219 ----DAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMD----PQASLKAEDILNSWPDAE 270
D +LMDLG SSMQ++ PERGFS+ DGPLDMRMD P A D++N+
Sbjct: 160 PGTFDGVLMDLGCSSMQLDTPERGFSLRKDGPLDMRMDGGRYPDMP-TAADVVNALDQQA 218
Query: 271 VGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTP--GMRGRR---QGWI 325
+ +LR YGEE + + + IVQAR + T +L ++ P + R+ Q
Sbjct: 219 LASILRTYGEEKHAKKIASAIVQARSIYPITRTQQLASIVAGAFPPSAVYTRKDLLQRST 278
Query: 326 KTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIID 385
AT+ FQALRI VN+EL L + L L PGGRL +SFHSLEDRIVK+ L I
Sbjct: 279 HIATKTFQALRIFVNNELNELYTGLKTAQKFLRPGGRLVALSFHSLEDRIVKRFLLGISM 338
Query: 386 HNREDAEGNEEELRNIR----DDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRC 441
R + ++ ++ + +N E +R+ W +++ K+ ++P ++ + N R
Sbjct: 339 TERFNLSVRQQVMKTSQLGSDHENTEEVSMRRAPLMW--ELIHKKVLSPQDQDVQDNPRG 396
Query: 442 RSAKLRVIQKI 452
RSAKLR K+
Sbjct: 397 RSAKLRAAIKL 407
>gi|194468375|ref|ZP_03074361.1| S-adenosyl-methyltransferase MraW [Lactobacillus reuteri 100-23]
gi|194453228|gb|EDX42126.1| S-adenosyl-methyltransferase MraW [Lactobacillus reuteri 100-23]
Length = 318
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 127/339 (37%), Positives = 178/339 (52%), Gaps = 32/339 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E + + T T +VD TLG GH+ AI++ + L+ D D +A+ +
Sbjct: 6 HVTVLLKEAVAGLNVQPTGT-YVDATLGGGGHTQAILQQLVDGHLY-SFDQDQTAIDYNK 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
HL + + Q K NFR+IK+ L N+ R V+ IL DLG+SS Q ++
Sbjct: 64 EHLKTAIEQQ-----KLTLVEDNFRNIKTELNSY--NVKR--VNGILYDLGVSSPQFDDA 114
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
+RGFS D PLDMRM+ + L A +++N WP + ++L YGEE + KI Q R
Sbjct: 115 KRGFSYQHDAPLDMRMNQEQKLSAMEVVNEWPYERLVKILYRYGEEKFAKSIARKIEQRR 174
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +T ELVD+I+ P RR G A + FQA+RIAVNDEL LE SL D
Sbjct: 175 KIAPIKTTFELVDVIKEGIPAA-ARRHGG-HPAKKSFQAIRIAVNDELGALEESLEQALD 232
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L GGR+ VI+F SLEDR+VK F + + +G + I
Sbjct: 233 LLDVGGRISVITFQSLEDRLVKTMFREKTSLSGDVPQG-----------------LPVIP 275
Query: 416 QGW--NGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
G + K++ K+PI S EE N R SAKLR+I+KI
Sbjct: 276 AGMEPDFKLINKKPIVASDEELAANHRAHSAKLRIIEKI 314
>gi|407984040|ref|ZP_11164671.1| S-adenosyl-methyltransferase MraW [Mycobacterium hassiacum DSM
44199]
gi|407374314|gb|EKF23299.1| S-adenosyl-methyltransferase MraW [Mycobacterium hassiacum DSM
44199]
Length = 356
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 113/291 (38%), Positives = 159/291 (54%), Gaps = 23/291 (7%)
Query: 99 SNKDYDYESIIQQQQSSHIPVM-------LGEVLDVFSSSRTITSFVDCTLGAAGHSSAI 151
+++ D E HIPV+ L L +S+ + +D TLGA GH+
Sbjct: 21 ADEQSDNEKPASDADFGHIPVLAERCVELLAPALTRYSADGSGAVLLDATLGAGGHAERF 80
Query: 152 IRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRH--IKSVLGQI 209
+ P L+L IG+D DP+AL + G+ + R+ IK VL +
Sbjct: 81 LSRFPGLRL-IGLDRDPNAL---------WIAGERLARFRDRVLLVRTRYDRIKEVLAE- 129
Query: 210 DENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDA 269
+ +D +L DLG+SSMQ++ ERGFS D PLDMRMDP + L A D++N++ +
Sbjct: 130 -SSYWAFELDGVLFDLGVSSMQLDRTERGFSYSADAPLDMRMDPDSPLTAADVVNTYDER 188
Query: 270 EVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTAT 329
+ RVLR++GEE + +IV+ R R +TGELV+L+ P RR G A
Sbjct: 189 SLTRVLRDFGEERFAGRIAAQIVRRRARKPFTTTGELVELLYQAIPAA-ARRAGG-HPAK 246
Query: 330 RVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTF 380
R FQALRIAVN EL +L ++L A + L PGGR+ V+S+ SLEDRIVKQ F
Sbjct: 247 RTFQALRIAVNGELDSLRAALPAAMEALRPGGRIVVMSYQSLEDRIVKQQF 297
>gi|329117643|ref|ZP_08246360.1| S-adenosyl-methyltransferase MraW [Streptococcus parauberis NCFD
2020]
gi|326908048|gb|EGE54962.1| S-adenosyl-methyltransferase MraW [Streptococcus parauberis NCFD
2020]
Length = 316
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 126/341 (36%), Positives = 180/341 (52%), Gaps = 37/341 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+L E +D+ + + +VD TLG AGHS+ ++ E D D A+ A+
Sbjct: 7 HITVLLNETVDMLNV-KPDGIYVDATLGGAGHSAYLLSQLNENGHLYCFDQDQKAIDNAQ 65
Query: 176 AHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
L + GQ TF K NFR++KS L + + +D IL DLG+SS Q++
Sbjct: 66 VFLKPFIDKGQV-------TFIKDNFRNLKSRLASLG----VTEIDGILYDLGVSSPQLD 114
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
ERGFS D PLDMRMD +A L A ++N + ++ R+ YGE+ + KI Q
Sbjct: 115 ERERGFSYRQDAPLDMRMDTEAELTAYQVVNHYAFNDLVRIFFRYGEDKFSKQIARKIEQ 174
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +T EL +LI+S P +++G A ++FQA+RI VNDEL E S+
Sbjct: 175 AREIKPIETTAELAELIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAAEESIQQA 232
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTF--LSIIDHNREDAEGNEEELRNIRDDNINETWI 411
D LA GR+ VI+FHSLEDR+ KQ F S +D + N I
Sbjct: 233 MDILALDGRISVITFHSLEDRLTKQLFKEASTVDVPK------------------NIPII 274
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ +Q ++++++PI PS EE N R SAKLRV +KI
Sbjct: 275 PEHLQP-KFELVSRKPILPSLEELEANNRAHSAKLRVARKI 314
>gi|312880226|ref|ZP_07740026.1| S-adenosyl-methyltransferase MraW [Aminomonas paucivorans DSM
12260]
gi|310783517|gb|EFQ23915.1| S-adenosyl-methyltransferase MraW [Aminomonas paucivorans DSM
12260]
Length = 324
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 128/339 (37%), Positives = 174/339 (51%), Gaps = 48/339 (14%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+PVML EVL+ VD TLGAAGH+ AI+ P +L +G+D DPSAL +AR
Sbjct: 4 HVPVMLQEVLEALRPWEEQVCVVDGTLGAAGHARAILANCPRCRL-VGIDQDPSALDEAR 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
LN +G + NFR + ++L + + + A L DLG+SSMQ++
Sbjct: 63 --LNLAPYGD-----RVTLIPGNFRDLSTLLPRYEIKV----CSAFLFDLGVSSMQIDRE 111
Query: 236 ERGFSVLGDGPLDMRMDPQA---SLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
ERGFS G+GPLDMRMD + A DI+NSW ++ + R YGE+ + IV
Sbjct: 112 ERGFSFHGEGPLDMRMDSGTLSRGVTAADIVNSWELGDLIGLFRRYGEDPFAVPIARAIV 171
Query: 293 QARLR-GGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
R R G L +T LV LI+ P R+ G A R+FQALRIAVNDE++ L +L
Sbjct: 172 MHRERYGPLMTTESLVALIRRTLPAPAQRKAG-THPARRIFQALRIAVNDEMEALRETLE 230
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
+ + I++HSLEDR+VKQ +TW
Sbjct: 231 SLPSFCGDPSTVVFITYHSLEDRLVKQHM---------------------------KTWA 263
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
+ G ++TK+P+ P EE R N R RSAKLRV +
Sbjct: 264 AE----GKGLLVTKKPLVPREEEIRENKRSRSAKLRVFR 298
>gi|55821677|ref|YP_140119.1| S-adenosyl-methyltransferase MraW [Streptococcus thermophilus LMG
18311]
gi|55737662|gb|AAV61304.1| S-adenosylmethionine-dependent methyltransferase, putative
[Streptococcus thermophilus LMG 18311]
Length = 354
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 122/344 (35%), Positives = 182/344 (52%), Gaps = 29/344 (8%)
Query: 109 IQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDP 168
I + H+ V+L E +D+ + +VD TLG AGHSS ++ E D D
Sbjct: 38 IMTNEFHHVTVLLHETVDMLDI-KPDGIYVDATLGGAGHSSYLLSQLSEKGHLYCFDQDQ 96
Query: 169 SALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMS 228
A+ A+ L + +K NFR++KS L E + S +D IL DLG+S
Sbjct: 97 KAIDNAQVRLKDYIDKGMVTFIKD-----NFRNLKSNL----EALGVSEIDGILYDLGVS 147
Query: 229 SMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQ 288
S Q++ ERGFS D LDMRM+ +ASL A D++N++P ++ R+ +YGE+ +
Sbjct: 148 SPQLDERERGFSYKQDAKLDMRMNEEASLTAYDVVNTYPYNDLVRIFFKYGEDKFSKQIA 207
Query: 289 NKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLES 348
KI QAR + +T EL ++I+S P +++G A ++FQA+RI VNDEL +
Sbjct: 208 RKIEQARQVKPIETTTELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADE 265
Query: 349 SLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE 408
S+ D LA GR+ VI+FHSLEDR+ KQ F +E + + +
Sbjct: 266 SIQEALDLLAVNGRISVITFHSLEDRLTKQLF-------KEASTADVPK---------GL 309
Query: 409 TWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+I + +Q ++ ++PI PS EE N R SAKLRV +KI
Sbjct: 310 PFIPEDLQPKVA-LVNRKPILPSQEELEANNRSHSAKLRVAKKI 352
>gi|256390851|ref|YP_003112415.1| S-adenosyl-methyltransferase MraW [Catenulispora acidiphila DSM
44928]
gi|256357077|gb|ACU70574.1| S-adenosyl-methyltransferase MraW [Catenulispora acidiphila DSM
44928]
Length = 316
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 120/346 (34%), Positives = 179/346 (51%), Gaps = 43/346 (12%)
Query: 114 SSHIPVMLGEVLDVFSSS--RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
++HIPVML +++ + R +D TLG GHS A +R P+++L IG+D DP AL
Sbjct: 4 ATHIPVMLERCVEILGPALERPGAVVLDATLGLGGHSEAFLRRFPDVRL-IGLDRDPQAL 62
Query: 172 AKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAI---LMDLGMS 228
+ L F + + +V +I + + R GV + L DLG+S
Sbjct: 63 EASGRRLAP--------------FGERATLVHAVYDEIPDVLERLGVAELSGTLFDLGVS 108
Query: 229 SMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQ 288
S+Q++ ERGF+ D PLDMRMD + A DI+N++P A++ R+LR+YGEE +
Sbjct: 109 SLQLDMRERGFAYSYDAPLDMRMDSSRGITAADIVNTYPAADIARILRDYGEERFARRIA 168
Query: 289 NKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLES 348
++IV R + +T L DL++ P R G A R FQALRIAVNDEL LE
Sbjct: 169 DRIVAEREKEPFTTTARLSDLVRDSIPAATRRTGGH--PAKRAFQALRIAVNDELPVLER 226
Query: 349 SLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE 408
+L A GGR+ V+S+HSLEDR+VK+ F A+ +E +
Sbjct: 227 ALPAAVAATGLGGRIAVLSYHSLEDRLVKRVF----------AKASE---------SAAP 267
Query: 409 TWIRQIIQGWNGK--ILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ + + + K +LT+ P+ E N R SAKLR +++
Sbjct: 268 PGLPVVPEQYQPKFRLLTRGAEPPTDAETAENPRAASAKLRAAERV 313
>gi|163846346|ref|YP_001634390.1| S-adenosyl-methyltransferase MraW [Chloroflexus aurantiacus
J-10-fl]
gi|222524111|ref|YP_002568582.1| S-adenosyl-methyltransferase MraW [Chloroflexus sp. Y-400-fl]
gi|263445774|sp|A9WG80.1|RSMH_CHLAA RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|263446400|sp|B9LKK0.1|RSMH_CHLSY RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|163667635|gb|ABY34001.1| S-adenosyl-methyltransferase MraW [Chloroflexus aurantiacus
J-10-fl]
gi|222447990|gb|ACM52256.1| S-adenosyl-methyltransferase MraW [Chloroflexus sp. Y-400-fl]
Length = 301
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 128/338 (37%), Positives = 167/338 (49%), Gaps = 45/338 (13%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRA-HPELKLHIGVDVDPSALAKA 174
H PV+L EVL + + R ++D T+G GH+ A+++A P +L + +D A A
Sbjct: 7 HTPVLLTEVLTMLAP-RPAGQYLDATVGGGGHALAVLQAAQPGGRL---LGIDADPAALA 62
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
G + H + + + G D IL DLG+SS Q++
Sbjct: 63 ATAARLQAAGLIEQAVLCHGSFADLATLAATAG-------FGAFDGILFDLGVSSYQLDT 115
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
PERGFS DGPLDMR+DP L A D++N + E+ ++ YGEE + IV+
Sbjct: 116 PERGFSFTADGPLDMRLDPTQGLTAADMVNRLSERELADIIFLYGEEHAARRIARAIVEH 175
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R T EL +++ G R G I ATR FQALRIAVN EL L ++L
Sbjct: 176 RRTQPFQRTAELAEVVARAV----GGRHGRIHPATRTFQALRIAVNQELDRLRATLPQAV 231
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
D LAPGGRL VISFHSLEDRIVKQ FL R +A G L
Sbjct: 232 DLLAPGGRLAVISFHSLEDRIVKQ-FL------RAEASGETPRL---------------- 268
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
I+TK+PI P+A E N R RSAKLRV +I
Sbjct: 269 ------TIVTKKPIVPTAAEVANNPRARSAKLRVATRI 300
>gi|365925145|ref|ZP_09447908.1| 16S rRNA m(4)C1402 methyltranserfase [Lactobacillus mali KCTC 3596
= DSM 20444]
gi|420266168|ref|ZP_14768659.1| 16S rRNA methyltransferase [Lactobacillus mali KCTC 3596 = DSM
20444]
gi|394426222|gb|EJE99100.1| 16S rRNA methyltransferase [Lactobacillus mali KCTC 3596 = DSM
20444]
Length = 316
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 128/348 (36%), Positives = 180/348 (51%), Gaps = 50/348 (14%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E ++ + + +VDCTLG GHS I+ E I D D +A+
Sbjct: 6 HTTVLLHEAVEGLAIKQD-GIYVDCTLGGGGHSGLIMSKLSEKGHLISFDQDQTAITYNE 64
Query: 176 AHL-NSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
+ L G+ TF K NFR + + L ++++I + VD IL DLG+SS Q +
Sbjct: 65 DRFKDDLSSGKI-------TFVKSNFRFLSTKL--LEKDI--TSVDGILYDLGVSSPQFD 113
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
N +RGFS D LDMRMD L AE I+N WP ++ R+ YGEE + +I +
Sbjct: 114 NADRGFSYRYDSKLDMRMDQTQDLNAEKIVNEWPYEKLVRIFFRYGEEKYAKSIARRIEK 173
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
R + +TG+LV+LI+ P R RR G A +VFQA+RIAVNDEL LE SL
Sbjct: 174 ERQIARIETTGQLVELIKESIPA-RARRTGG-HPAKKVFQAIRIAVNDELGALEQSLEEA 231
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
+ + GGR+ VI+F SLEDR+VK F +E +E ++
Sbjct: 232 LELIDVGGRISVITFQSLEDRLVKSMF-------KEKSE------------------VKD 266
Query: 414 IIQGW---------NGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ QG K+++++PI PS EE N R SAKLRVI++I
Sbjct: 267 LPQGLPVVPDEFQPKFKLISRKPILPSEEELLNNHRAHSAKLRVIERI 314
>gi|410258126|gb|JAA17030.1| methyltransferase like 15 [Pan troglodytes]
gi|410334589|gb|JAA36241.1| methyltransferase like 15 [Pan troglodytes]
gi|410334591|gb|JAA36242.1| methyltransferase like 15 [Pan troglodytes]
Length = 407
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 128/371 (34%), Positives = 197/371 (53%), Gaps = 41/371 (11%)
Query: 100 NKDYDYESIIQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELK 159
++D D+E++ + HIPVM+ EV+ S + F+D T G+ GH+ AI++ ++
Sbjct: 60 SQDRDFETMAK----LHIPVMVDEVVHCLSPQKG-QIFLDMTFGSGGHTKAILQKESDIV 114
Query: 160 LHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGV- 218
L+ +D DP+A A A HL+ L + K R + Q + ++++GV
Sbjct: 115 LY-ALDRDPTAYALAE-HLSEL-------------YPKQIRAMLGQFSQAEALLMKAGVQ 159
Query: 219 ----DAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMD----PQASLKAEDILNSWPDAE 270
D +LMDLG SSMQ++ PERGFS+ DGPLDMRMD P A D++N+
Sbjct: 160 PGTFDGVLMDLGCSSMQLDTPERGFSLRKDGPLDMRMDGGRYPDMP-TAADVVNALDQQA 218
Query: 271 VGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTP--GMRGRR---QGWI 325
+ +LR YGEE + + + IVQAR + T +L ++ P + R+ Q
Sbjct: 219 LASILRTYGEEKHAKKIASAIVQARSIYPITRTQQLASIVAGAFPPSAVYTRKDLLQRST 278
Query: 326 KTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIID 385
AT+ FQALRI VN+EL L + L L PGGRL +SFHSLEDRIVK+ L I
Sbjct: 279 HIATKTFQALRIFVNNELNELYTGLKTAQKFLRPGGRLVALSFHSLEDRIVKRFLLGISM 338
Query: 386 HNREDAEGNEEELRNIR----DDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRC 441
R + ++ ++ + +N E +R+ W +++ K+ ++P ++ + N R
Sbjct: 339 TERFNLSVRQQVMKTSQLGSDHENTEEVSMRRAPLMW--ELIHKKVLSPQDQDVQDNPRG 396
Query: 442 RSAKLRVIQKI 452
RSAKLR K+
Sbjct: 397 RSAKLRAAIKL 407
>gi|157803594|ref|YP_001492143.1| S-adenosyl-methyltransferase MraW [Rickettsia canadensis str.
McKiel]
gi|167011837|sp|A8EYC5.1|RSMH_RICCK RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|157784857|gb|ABV73358.1| S-adenosyl-methyltransferase MraW [Rickettsia canadensis str.
McKiel]
Length = 308
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 123/344 (35%), Positives = 189/344 (54%), Gaps = 44/344 (12%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHI-GVDVDPSAL 171
Q SHIPVML E+L + S++DCT GA G+S AI+ + ++ +D DP+ +
Sbjct: 2 QQSHIPVMLNEMLANLAPQDG-KSYLDCTFGAGGYSKAILES---CNCYVTALDRDPNVI 57
Query: 172 AKA-RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSM 230
+A R N + ++T+ FA +F +K D I++DLG+SSM
Sbjct: 58 KRAERIKQN---YSTRFDFIETN-FADSFAKLKE-----------KKFDGIVLDLGVSSM 102
Query: 231 QVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNK 290
Q++ +RGFS L D PLDMRM Q L AE+ +N+ + E+ ++ +YG+ES + +
Sbjct: 103 QLDIADRGFSFLHDSPLDMRMSGQG-LSAEEFINTVEEKELADIIYKYGDESFSRRIAKR 161
Query: 291 IVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSL 350
IV+ R ++STG+L +++++ G R+G I AT+ FQA+RI +NDEL+ LE L
Sbjct: 162 IVEYRKTARINSTGKLAEIVRNSI----GFRKGKIDPATKTFQAIRIYINDELRELERFL 217
Query: 351 HACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE-- 408
+ L GRL ++SFHSLEDRIVK F +E++E + +D+ + +
Sbjct: 218 ANVQNILNKDGRLVIVSFHSLEDRIVKHFF-------KENSEKPVARSKYSKDNPVIDPN 270
Query: 409 TWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
W+ KI+T + PS +E LN R RSAKLR + I
Sbjct: 271 KWL---------KIITNKAEAPSDKEVELNVRARSAKLRAAKAI 305
>gi|314933355|ref|ZP_07840720.1| S-adenosyl-methyltransferase MraW [Staphylococcus caprae C87]
gi|313653505|gb|EFS17262.1| S-adenosyl-methyltransferase MraW [Staphylococcus caprae C87]
Length = 311
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 124/337 (36%), Positives = 179/337 (53%), Gaps = 34/337 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ VML E +D + + + +VDCTLG AGH+ ++ + I +D D +AL A+
Sbjct: 4 HVSVMLNETID-YLNIKEDGVYVDCTLGGAGHALYLLNQLNDEGRLIAIDQDLTALENAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L LH H NFR + ++L D NI + VD I DLG+SS Q++ P
Sbjct: 63 VVLKEHLHKVTFVH-------SNFRELTNILK--DLNIEK--VDGIYYDLGVSSPQLDVP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D LDMRMD SL A +++N W + ++ YGEE + +I R
Sbjct: 112 ERGFSYHHDAKLDMRMDQTQSLSAFEVVNEWSYEALVKIFYRYGEEKFSKQIARRIEANR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +T +LVD+I+ P + RR+G A RVFQA+RIAVNDEL E S+ +
Sbjct: 172 EQHPIETTLQLVDVIKEGIPA-KARRKGG-HPAKRVFQAIRIAVNDELSAFEDSIEQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
+ GR+ VI+FHSLEDR+ KQ F ++ E E R I I
Sbjct: 230 SVNINGRISVITFHSLEDRLCKQIF--------QEYEKGPEVPRG----------IPIIP 271
Query: 416 QGWNGKI--LTKRPITPSAEEERLNCRCRSAKLRVIQ 450
+G++ K+ + ++PIT + E+ N R RSAKLRV +
Sbjct: 272 EGYSPKLKRVNRKPITATEEDLDENNRARSAKLRVAE 308
>gi|392375353|ref|YP_003207186.1| S-adenosyl-dependent methyltransferase [Candidatus Methylomirabilis
oxyfera]
gi|258593046|emb|CBE69357.1| S-adenosyl-dependent methyl transferase [Candidatus
Methylomirabilis oxyfera]
Length = 301
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 129/344 (37%), Positives = 171/344 (49%), Gaps = 52/344 (15%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
+ H+PV+L E + F R ++D T+G GH+ ++ G+D D ALA
Sbjct: 4 EGRHLPVLLEETV-AFLQPRPGGCYLDATVGLGGHAETLLIESAPTGCLCGIDRDVEALA 62
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQID-ENILRSGVDAILMDLGMSSMQ 231
A+ L + L+ FA LG I EN R D IL DLG SS Q
Sbjct: 63 LAKGRLGQF---GSRVELRYGDFAS--------LGAIAAENEWRP-FDGILFDLGFSSFQ 110
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLK-AEDILNSWPDAEVGRVLREYGEESNWHLLQNK 290
++N RGFS + DG LDMRMD Q K A ++L P+ E+ R+L++YGEE + +
Sbjct: 111 MDNASRGFSFMRDGLLDMRMDRQGCDKSAAELLARIPERELARLLQDYGEERWAKRIAAR 170
Query: 291 IVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGW---IKTATRVFQALRIAVNDELKTLE 347
IV+AR L ST +L L+ + P R+ W I ATR FQALRIAVNDEL L
Sbjct: 171 IVEARRTQPLTSTAQLARLVAAAVP-----RRAWPRRIHVATRTFQALRIAVNDELARLR 225
Query: 348 SSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNIN 407
L + LA GGR+ VISFHSLEDRIVK+ F
Sbjct: 226 RGLQNAVELLAVGGRICVISFHSLEDRIVKEVF--------------------------- 258
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
W R + ++LTKRP+ P+ E +N R RSAKLR ++
Sbjct: 259 RGWARS--EPPRVRLLTKRPVVPTERESEINPRARSAKLRAAER 300
>gi|55823597|ref|YP_142038.1| S-adenosyl-methyltransferase MraW [Streptococcus thermophilus
CNRZ1066]
gi|55739582|gb|AAV63223.1| S-adenosylmethionine-dependent methyltransferase, putative
[Streptococcus thermophilus CNRZ1066]
Length = 354
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 123/346 (35%), Positives = 181/346 (52%), Gaps = 33/346 (9%)
Query: 109 IQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDP 168
I + H+ V+L E +D+ + +VD TLG AGHSS ++ E D D
Sbjct: 38 IMTNEFHHVTVLLHETVDMLDI-KPDGIYVDATLGGAGHSSYLLSQLSEKGHLYCFDQDQ 96
Query: 169 SALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMS 228
A+ A+ L + +K NFR++KS L E + S +D IL DLG+S
Sbjct: 97 KAIDNAQVRLKDYIDKGMVTFIKD-----NFRNLKSNL----EALGVSEIDGILYDLGVS 147
Query: 229 SMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQ 288
S Q++ ERGFS D LDMRM+ +ASL A D++N++P ++ R+ +YGE+ +
Sbjct: 148 SPQLDERERGFSYKQDAKLDMRMNEEASLTAYDVVNTYPYNDLVRIFFKYGEDKFSKQIA 207
Query: 289 NKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLES 348
KI QAR + +T EL ++I+S P +++G A ++FQA+RI VNDEL +
Sbjct: 208 RKIEQARQVKPIETTTELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADE 265
Query: 349 SLHACFDCLAPGGRLGVISFHSLEDRIVKQTF--LSIIDHNREDAEGNEEELRNIRDDNI 406
S+ D LA GR+ VI+FHSLEDR+ KQ F S +D +
Sbjct: 266 SIQEALDLLAVDGRISVITFHSLEDRLTKQLFKEASTVDVPK------------------ 307
Query: 407 NETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+I + +Q ++ ++PI PS EE N R SAKLRV +KI
Sbjct: 308 GLPFIPEDLQPKVA-LVNRKPILPSQEELEANNRSHSAKLRVAKKI 352
>gi|170748783|ref|YP_001755043.1| S-adenosyl-methyltransferase MraW [Methylobacterium radiotolerans
JCM 2831]
gi|263456464|sp|B1LYT9.1|RSMH_METRJ RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|170655305|gb|ACB24360.1| S-adenosyl-methyltransferase MraW [Methylobacterium radiotolerans
JCM 2831]
Length = 353
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 120/343 (34%), Positives = 176/343 (51%), Gaps = 47/343 (13%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+PV+L EV++ + + VD T GA G++ A++ A P L++ + +D DP+A+A +
Sbjct: 24 HVPVLLAEVVEALGTEGG--TAVDGTFGAGGYTRALLAADPALQV-VAIDRDPTAIAGGQ 80
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG---VDAILMDLGMSSMQV 232
A + R + G +D + +G VD +++D+G+SSMQ+
Sbjct: 81 ALVAE--------------SGGRLRLLPGRFGDLDGLLAEAGIAQVDRVVLDIGVSSMQL 126
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ PERGFS DGPLDMRM A D++N + + ++ +GEE + I+
Sbjct: 127 DAPERGFSFRSDGPLDMRMACDGP-SAADLVNEADETVLADIIYHFGEERRSRAVARTIL 185
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
+AR RG + +T +L +L+ V +R I ATR FQ LRIAVNDEL L +LHA
Sbjct: 186 EARRRGRIETTAQLAELVAGV---VRTEPGSHIHPATRTFQGLRIAVNDELGELVRALHA 242
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLS----IIDHNREDAEGNEEELRNIRDDNINE 408
L PGGRL V++FHSLEDRIVKQ F + +R G E +R+ R
Sbjct: 243 AERVLRPGGRLAVVTFHSLEDRIVKQFFAARSGRSAQGSRHLPGGPVETVRSFRP----- 297
Query: 409 TWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+TK P+ P E N R RSAKLR ++
Sbjct: 298 --------------VTKGPVLPGEAETARNPRARSAKLRAAER 326
>gi|116628390|ref|YP_821009.1| S-adenosyl-methyltransferase MraW [Streptococcus thermophilus
LMD-9]
gi|386087305|ref|YP_006003179.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Streptococcus thermophilus ND03]
gi|418028590|ref|ZP_12667149.1| Methyltransferase [Streptococcus thermophilus CNCM I-1630]
gi|419706792|ref|ZP_14234302.1| Ribosomal RNA small subunit methyltransferase H [Streptococcus
salivarius PS4]
gi|445382490|ref|ZP_21427249.1| 16S rRNA m(4)C1402 methyltransferase [Streptococcus thermophilus
MTCC 5460]
gi|445395142|ref|ZP_21428979.1| 16S rRNA m(4)C1402 methyltransferase [Streptococcus thermophilus
MTCC 5461]
gi|68565436|sp|Q5LY91.2|RSMH_STRT1 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|122267015|sp|Q03J09.1|RSMH_STRTD RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|116101667|gb|ABJ66813.1| Predicted S-adenosylmethionine-dependent methyltransferase involved
in cell envelope biogenesis [Streptococcus thermophilus
LMD-9]
gi|312279018|gb|ADQ63675.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Streptococcus thermophilus ND03]
gi|354686926|gb|EHE87048.1| Methyltransferase [Streptococcus thermophilus CNCM I-1630]
gi|383283514|gb|EIC81468.1| Ribosomal RNA small subunit methyltransferase H [Streptococcus
salivarius PS4]
gi|444748600|gb|ELW73560.1| 16S rRNA m(4)C1402 methyltransferase [Streptococcus thermophilus
MTCC 5461]
gi|444748699|gb|ELW73656.1| 16S rRNA m(4)C1402 methyltransferase [Streptococcus thermophilus
MTCC 5460]
Length = 316
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 125/341 (36%), Positives = 181/341 (53%), Gaps = 37/341 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG AGHSS ++ E D D A+ A+
Sbjct: 7 HVTVLLHETVDMLDI-KPDGIYVDATLGGAGHSSYLLSQLSEKGHLYCFDQDQKAIDNAQ 65
Query: 176 AHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
L + G TF K NFR++KS L E + S +D IL DLG+SS Q++
Sbjct: 66 VRLKDYIDKGMV-------TFIKDNFRNLKSNL----EALGVSEIDGILYDLGVSSPQLD 114
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
ERGFS D LDMRM+ +ASL A D++N++P ++ R+ +YGE+ + KI Q
Sbjct: 115 ERERGFSYKQDAKLDMRMNEEASLTAYDVVNTYPYNDLVRIFFKYGEDKFSKQIARKIEQ 174
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +T EL ++I+S P +++G A ++FQA+RI VNDEL + S+
Sbjct: 175 ARQVKPIETTTELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADESIQEA 232
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTF--LSIIDHNREDAEGNEEELRNIRDDNINETWI 411
D LA GR+ VI+FHSLEDR+ KQ F S +D + +I
Sbjct: 233 LDLLAVDGRISVITFHSLEDRLTKQLFKEASTVDVPK------------------GLPFI 274
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ +Q ++ ++PI PS EE N R SAKLRV +KI
Sbjct: 275 PEDLQPKVA-LVNRKPILPSQEELEANNRSHSAKLRVAKKI 314
>gi|404482907|ref|ZP_11018132.1| ribosomal RNA small subunit methyltransferase H 2 [Clostridiales
bacterium OBRC5-5]
gi|404343997|gb|EJZ70356.1| ribosomal RNA small subunit methyltransferase H 2 [Clostridiales
bacterium OBRC5-5]
Length = 311
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 122/339 (35%), Positives = 182/339 (53%), Gaps = 35/339 (10%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
+H V+L EV++ + + +VD TLG GH+ +++ KL IG+D D A+ A
Sbjct: 4 NHKSVLLNEVIESLNI-KADGCYVDGTLGGGGHALEVVKRLGSGKL-IGIDQDADAVKAA 61
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L + N+ +I+++L + ENI VD I +DLG+SS Q++
Sbjct: 62 TQRLIDYSNN-------VIIIRDNYVNIENILKK--ENI--DKVDGIYIDLGVSSYQLDT 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGF+ D PLDMRMD + LKA DI+N + ++E+ ++R+YGE+ + IV+
Sbjct: 111 AERGFTYRYDAPLDMRMDDRNELKASDIVNDYSESELFHIIRDYGEDRFAKNIAKHIVEY 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + + +T ELVD+I++ P M+ + G A R FQA+RI +N EL+ L SL+
Sbjct: 171 RNKKRIETTFELVDIIKASIP-MKIQVTGG-HPAKRTFQAIRIELNKELEVLTDSLNVMI 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
D L PGGRL VI+FHSLEDRIVKQ F + +
Sbjct: 229 DLLKPGGRLSVITFHSLEDRIVKQAF------------------KKAESPCVCPKKFPVC 270
Query: 415 IQG--WNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ G G+++T++ I PS EE N R +SAKLRV +K
Sbjct: 271 VCGNKSKGRVITRKAILPSEEELEENSRSKSAKLRVFEK 309
>gi|254993138|ref|ZP_05275328.1| S-adenosyl-methyltransferase MraW [Listeria monocytogenes FSL
J2-064]
Length = 308
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 128/337 (37%), Positives = 174/337 (51%), Gaps = 36/337 (10%)
Query: 119 VMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHL 178
V+L E +D+ + +VD TLG AGHS ++ E D D +A+ A+ L
Sbjct: 3 VLLHETVDMLEV-KPDGIYVDATLGGAGHSEYLLNKLNEKGHLFAFDQDQTAIDNAKIKL 61
Query: 179 NSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPER 237
+ TF K NFR +K L + I VD IL DLG+SS Q++ ER
Sbjct: 62 AD--------YSDKVTFIKANFRDMKEALNE--RGI--EAVDGILYDLGVSSPQLDERER 109
Query: 238 GFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLR 297
GFS D LDMRMD + L A+ ++N W ++ R+ +YGEE + +I + R
Sbjct: 110 GFSYHQDAALDMRMDQEQELTAKIVVNEWSYQDLIRIFFQYGEEKFSKQIAREIERRREV 169
Query: 298 GGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCL 357
+ +TGELVD+I++ P R+ G R FQA+RIAVNDEL +E SL L
Sbjct: 170 KPIETTGELVDIIKTAIPAPARRKGGH--PGKRTFQAIRIAVNDELGAVEDSLEKALTLL 227
Query: 358 APGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNINETWIRQII 415
PGGR+ VI+FHSLEDRI K F +E +G + L I D+
Sbjct: 228 KPGGRISVITFHSLEDRITKHLF-------QEATKGPDLPPGLPVIPDE----------- 269
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ K+ T++PI PS EE N R RSAKLRVI+KI
Sbjct: 270 YKPDFKLATRKPIVPSEEELEQNNRARSAKLRVIEKI 306
>gi|165377209|ref|NP_001107000.1| probable methyltransferase-like protein 15 isoform 1 [Homo sapiens]
gi|160012249|sp|A6NJ78.1|MET15_HUMAN RecName: Full=Probable methyltransferase-like protein 15; AltName:
Full=Methyltransferase 5 domain-containing protein 1
gi|119588672|gb|EAW68266.1| methyltransferase 5 domain containing 1, isoform CRA_a [Homo
sapiens]
Length = 407
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 128/371 (34%), Positives = 197/371 (53%), Gaps = 41/371 (11%)
Query: 100 NKDYDYESIIQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELK 159
++D D+E++ + HIPVM+ EV+ S + F+D T G+ GH+ AI++ ++
Sbjct: 60 SQDRDFETMAK----LHIPVMVDEVVHCLSPQKG-QIFLDMTFGSGGHTKAILQKESDIV 114
Query: 160 LHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGV- 218
L+ +D DP+A A A HL+ L + K R + Q + ++++GV
Sbjct: 115 LY-ALDRDPTAYALAE-HLSEL-------------YPKQIRAMLGQFSQAEALLMKAGVQ 159
Query: 219 ----DAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMD----PQASLKAEDILNSWPDAE 270
D +LMDLG SSMQ++ PERGFS+ DGPLDMRMD P A D++N+
Sbjct: 160 PGTFDGVLMDLGCSSMQLDTPERGFSLRKDGPLDMRMDGGRYPDMP-TAADVVNALDQQA 218
Query: 271 VGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTP--GMRGRR---QGWI 325
+ +LR YGEE + + + IVQAR + T +L ++ P + R+ Q
Sbjct: 219 LASILRTYGEEKHAKKIASAIVQARSIYPITRTQQLASIVAGAFPPSAIYTRKDLLQRST 278
Query: 326 KTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIID 385
AT+ FQALRI VN+EL L + L L PGGRL +SFHSLEDRIVK+ L I
Sbjct: 279 HIATKTFQALRIFVNNELNELYTGLKTAQKFLRPGGRLVALSFHSLEDRIVKRFLLGISM 338
Query: 386 HNREDAEGNEEELRNIR----DDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRC 441
R + ++ ++ + +N E +R+ W +++ K+ ++P ++ + N R
Sbjct: 339 TERFNLSVRQQVMKTSQLGSDHENTEEVSMRRAPLMW--ELIHKKVLSPQDQDVQDNPRG 396
Query: 442 RSAKLRVIQKI 452
RSAKLR K+
Sbjct: 397 RSAKLRAAIKL 407
>gi|145595735|ref|YP_001160032.1| S-adenosyl-methyltransferase MraW [Salinispora tropica CNB-440]
gi|262826474|sp|A4X9S3.1|RSMH_SALTO RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|145305072|gb|ABP55654.1| S-adenosyl-methyltransferase MraW [Salinispora tropica CNB-440]
Length = 371
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 122/346 (35%), Positives = 181/346 (52%), Gaps = 37/346 (10%)
Query: 113 QSSHIPVMLGEVLDVFSSS--RT----ITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDV 166
+ +H+PV+L L++ S + RT T +VD TLG GH+ AI+ AHP L +G+D
Sbjct: 5 RGAHVPVLLERCLELLSPALDRTGQTGRTVYVDATLGLGGHAEAILTAHPRTML-VGLDR 63
Query: 167 DPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLG 226
D ALA AR L + H + + VL +I + VD IL DLG
Sbjct: 64 DTEALAHARVRLARFAD-------RVHLEHAVYDELPDVLDRIGHPV----VDGILFDLG 112
Query: 227 MSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHL 286
+SS+Q++ P+RGF+ D PLDMRMD + AE+++NS+ E+ RVLR YGEE
Sbjct: 113 VSSLQLDAPDRGFAYAQDAPLDMRMDQSRGVTAEEVVNSYSHPELARVLRVYGEEKFASR 172
Query: 287 LQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTL 346
+ + IV+ R R + S+ +L +L++ P RR G A R FQALRI VN EL L
Sbjct: 173 IASAIVRERDRAPITSSAQLAELVRQAIPAP-ARRTGG-HPAKRTFQALRIEVNRELAAL 230
Query: 347 ESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNI 406
E++L A D LA GR+ V+S+HSLEDR+ K +++ D +R
Sbjct: 231 ETALPAALDRLAIEGRMVVLSYHSLEDRLTK---VALAD--------------RVRSKGP 273
Query: 407 NETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ + G ++L++ P E +N R S +LR +++
Sbjct: 274 IDLPVELPGTGPTFRLLSRGAELPGEAEVAVNPRAASVRLRAAERL 319
>gi|329770446|ref|ZP_08261828.1| ribosomal RNA small subunit methyltransferase H [Gemella sanguinis
M325]
gi|328836569|gb|EGF86229.1| ribosomal RNA small subunit methyltransferase H [Gemella sanguinis
M325]
Length = 310
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 119/314 (37%), Positives = 171/314 (54%), Gaps = 30/314 (9%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
+VDCTLG AGHS I++ KL+ D D AL A+ L+ K
Sbjct: 24 YVDCTLGGAGHSLEILKKLTTGKLY-AFDQDNVALENAKIKLSEYAD-------KVVFIK 75
Query: 197 KNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQAS 256
NF ++K L + +N+ VD +L DLG+SS Q++ PERGFS D LDMRMD AS
Sbjct: 76 SNFENLKEKLAE--QNVYE--VDGVLYDLGVSSPQLDTPERGFSYNYDTRLDMRMDTDAS 131
Query: 257 LKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPG 316
+ A +++N + ++ R+ YGEE + I + R + +T +LVD+I+ P
Sbjct: 132 ISAYEVVNEYSYHDLVRIFYRYGEEKFSKQIARNIEKKRELAPIETTFQLVDIIKESIPA 191
Query: 317 MRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIV 376
+ R G A RVFQA+RIAVN+EL E+SL D + GGR+ VI+FHSLEDRI
Sbjct: 192 AKRRTGGH--PAKRVFQAIRIAVNNELSVFENSLEQAIDIVKVGGRISVITFHSLEDRIC 249
Query: 377 KQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEER 436
KQ F S N+E + L + ++++++ K++T++PI PS +E
Sbjct: 250 KQIFNSYA-KNKEIPKN----LPILPNESLSKL-----------KLITRKPICPSDKELE 293
Query: 437 LNCRCRSAKLRVIQ 450
N R RSAKLRV +
Sbjct: 294 ENNRSRSAKLRVAE 307
>gi|417318131|ref|ZP_12104725.1| 16S rRNA m(4)C1402 methyltranserfase [Listeria monocytogenes
J1-220]
gi|328472688|gb|EGF43546.1| 16S rRNA m(4)C1402 methyltranserfase [Listeria monocytogenes
J1-220]
Length = 315
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 128/340 (37%), Positives = 175/340 (51%), Gaps = 36/340 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D+ + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 4 HETVLLHETVDMLEV-KPDGIYVDATLGGAGHSEYLLNKLNEKGHLFAFDQDQTAIDNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L + TF K NFR +K L + I VD IL DLG+SS Q++
Sbjct: 63 IKLAD--------YSDKVTFIKANFRDMKEALNE--RGI--EAVDGILYDLGVSSPQLDE 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS D LDMRMD + L A+ ++N W ++ R+ +YGEE + +I +
Sbjct: 111 RERGFSYHQDAALDMRMDQEQELTAKIVVNEWSYQDLIRIFFQYGEEKFSKQIAREIERR 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +TGELVD+I++ P R+ G R FQA+RIAVNDEL +E SL
Sbjct: 171 REVKPIETTGELVDIIKTAIPAPARRKGGH--PGKRTFQAIRIAVNDELGAVEDSLEKAL 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNINETWIR 412
L PGGR+ VI+FHSLEDRI K F +E +G + L I D+
Sbjct: 229 TLLKPGGRISVITFHSLEDRITKHLF-------QEATKGPDLPPGLPVIPDE-------- 273
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ K+ T++PI PS EE N R RSAKLRVI+K+
Sbjct: 274 ---YKPDFKLATRKPIVPSEEELEQNNRARSAKLRVIEKL 310
>gi|68565437|sp|Q5M2U6.2|RSMH_STRT2 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
Length = 316
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 124/339 (36%), Positives = 181/339 (53%), Gaps = 33/339 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG AGHSS ++ E D D A+ A+
Sbjct: 7 HVTVLLHETVDMLDI-KPDGIYVDATLGGAGHSSYLLSQLSEKGHLYCFDQDQKAIDNAQ 65
Query: 176 AHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
L + G TF K NFR++KS L E + S +D IL DLG+SS Q++
Sbjct: 66 VRLKDYIDKGMV-------TFIKDNFRNLKSNL----EALGVSEIDGILYDLGVSSPQLD 114
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
ERGFS D LDMRM+ +ASL A D++N++P ++ R+ +YGE+ + KI Q
Sbjct: 115 ERERGFSYKQDAKLDMRMNEEASLTAYDVVNTYPYNDLVRIFFKYGEDKFSKQIARKIEQ 174
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +T EL ++I+S P +++G A ++FQA+RI VNDEL + S+
Sbjct: 175 ARQVKPIETTTELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADESIQEA 232
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
D LA GR+ VI+FHSLEDR+ KQ F E + ++ +I +
Sbjct: 233 LDLLAVNGRISVITFHSLEDRLTKQLF----------KEASTADVPK------GLPFIPE 276
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+Q ++ ++PI PS EE N R SAKLRV +KI
Sbjct: 277 DLQPKVA-LVNRKPILPSQEELEANNRSHSAKLRVAKKI 314
>gi|197101179|ref|NP_001126687.1| probable methyltransferase-like protein 15 [Pongo abelii]
gi|75054772|sp|Q5R5T5.1|MET15_PONAB RecName: Full=Probable methyltransferase-like protein 15; AltName:
Full=Methyltransferase 5 domain-containing protein 1
gi|55732357|emb|CAH92881.1| hypothetical protein [Pongo abelii]
Length = 407
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 127/371 (34%), Positives = 196/371 (52%), Gaps = 41/371 (11%)
Query: 100 NKDYDYESIIQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELK 159
++D D+E++ + HIPVM+ EVL S + F+D T G+ GH+ AI++ ++
Sbjct: 60 SQDRDFETMAK----LHIPVMVDEVLHCLSPQKG-QIFLDMTFGSGGHTKAILQKESDIV 114
Query: 160 LHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGV- 218
L+ +D DP+A A A HL+ L + K R + Q + ++++GV
Sbjct: 115 LY-ALDRDPTAYALAE-HLSEL-------------YPKQIRAMLGQFSQAETLLMKAGVQ 159
Query: 219 ----DAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMD----PQASLKAEDILNSWPDAE 270
D +LMDLG SSMQ++ PERGFS+ DGPLDMRMD P A D++N++
Sbjct: 160 PGTFDGVLMDLGCSSMQLDTPERGFSLRKDGPLDMRMDGGRYPDMP-TAADVVNAFDQQA 218
Query: 271 VGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTP--GMRGRR---QGWI 325
+ +LR YGEE + + + IVQAR + T +L ++ P + R+ Q
Sbjct: 219 LASILRTYGEEKHAKKIASAIVQARSIYPITRTQQLASIVAGAFPPSAIYARKDLLQRST 278
Query: 326 KTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIID 385
AT+ FQA+RI VN+EL L L L PGGRL +SFHSLEDRI+K+ L I
Sbjct: 279 HIATKTFQAVRIFVNNELNELYMGLKTAQKFLRPGGRLVALSFHSLEDRIIKRFLLGISM 338
Query: 386 HNREDAEGNEEELRNIR----DDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRC 441
R + ++ ++ + +N E R+ W +++ K+ ++P ++ + N R
Sbjct: 339 TERFNLSVRQQVMKTSQLGSDHENTEEVSKRRAPLMW--ELIHKKVLSPQDQDVQDNPRA 396
Query: 442 RSAKLRVIQKI 452
RSAKLR K+
Sbjct: 397 RSAKLRAAIKL 407
>gi|391232004|ref|ZP_10268210.1| S-adenosyl-methyltransferase MraW [Opitutaceae bacterium TAV1]
gi|391221665|gb|EIQ00086.1| S-adenosyl-methyltransferase MraW [Opitutaceae bacterium TAV1]
Length = 325
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 128/342 (37%), Positives = 172/342 (50%), Gaps = 27/342 (7%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
+ +HIPV+L VL++ + ++DCT G GH+ A++ A P + H+ V +D A
Sbjct: 9 EPAHIPVLLQPVLELLAPY-ADGRYLDCTFGGGGHTHALLDAAP--RTHV-VALDRDPAA 64
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAK--NFRHIKSVLGQIDENILRSGVDAILMDLGMSSM 230
RA + +G L F + L I E G D IL DLG+SS
Sbjct: 65 LPRAAALAAEYGSGRFELIDRDFGRLGELAREHPALVAIREG---KGFDGILFDLGVSSF 121
Query: 231 QVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNK 290
Q+++ RGFS D P DMRMDP++ + A L + D + R +R+YGEE + +
Sbjct: 122 QLDDTARGFSFRNDAPADMRMDPRSGVPASLWLETATDEMLFRAIRDYGEERHASRVVRA 181
Query: 291 IVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSL 350
I +AR G L T L LI + P R R I ATR FQ +RIAVNDEL LE +L
Sbjct: 182 IKEARGTGALARTASLAGLIAAAIPA-RDRFASKIHPATRSFQGIRIAVNDELGALERAL 240
Query: 351 HACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETW 410
A F L GG L VISFHSLEDR VKQ F + G E + R ++ E
Sbjct: 241 PAAFGLLRSGGVLAVISFHSLEDRPVKQAFRRLC--------GQPESQEDHRPADLREK- 291
Query: 411 IRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ LT++P+TP E N R RSAKLR I+K+
Sbjct: 292 --------AAEPLTRKPVTPDDAELAANPRARSAKLRAIRKL 325
>gi|357419808|ref|YP_004932800.1| S-adenosyl-methyltransferase MraW [Thermovirga lienii DSM 17291]
gi|355397274|gb|AER66703.1| S-adenosyl-methyltransferase MraW [Thermovirga lienii DSM 17291]
Length = 303
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 115/337 (34%), Positives = 176/337 (52%), Gaps = 53/337 (15%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HIPVML EVL +++ ++ VD TLG G++ A ++ P + + +G+D D A+ A+
Sbjct: 4 HIPVMLDEVLKAVTNAPSLRRIVDATLGLGGYTKAFLKQWPHVSV-LGIDRDSEAIEIAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L L + + +F+ + +L +I + DAI+ DLG+S++Q++
Sbjct: 63 DKLAEFLD-------RVKFYNGDFKDLAEILKKIG----FTEPDAIVFDLGVSNLQISKE 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS DGPLDMRMD + L AE+++N++ + + R+YGEE + + I + R
Sbjct: 112 ERGFSFDLDGPLDMRMDTTSDLTAEEVINTYSKEALSEIFRKYGEERHASRIAWGICKYR 171
Query: 296 LRGGL-HSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
GL +TGELV +I+ P R+ G A RVFQALRI VN+ELK LE +L C
Sbjct: 172 QEHGLIRTTGELVSVIRMTLPAPVQRKMGK-NPARRVFQALRIEVNNELKALEEALSGCR 230
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
+ G + V+S+HSLED+IVK+ F
Sbjct: 231 EVAKEGTVVVVVSYHSLEDKIVKKQF---------------------------------- 256
Query: 415 IQGWN----GKILTKRPITPSAEEERLNCRCRSAKLR 447
+ W G++L+K+ + P+ EE N + RSAKLR
Sbjct: 257 -KEWESLGLGRMLSKKVVKPTEEEITRNKKARSAKLR 292
>gi|452852294|ref|YP_007493978.1| Ribosomal RNA small subunit methyltransferase H [Desulfovibrio
piezophilus]
gi|451895948|emb|CCH48827.1| Ribosomal RNA small subunit methyltransferase H [Desulfovibrio
piezophilus]
Length = 326
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 121/343 (35%), Positives = 183/343 (53%), Gaps = 37/343 (10%)
Query: 114 SSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAK 173
S H V+L EV++ + ++D TLG GHS A+++A +G+D D +AL
Sbjct: 10 SIHTTVLLHEVIEWLKPTPG-GRYMDGTLGMGGHSLALMQAADGKAELLGLDRDQTALGH 68
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
A A L +TH F F + L ++ G+D ++DLG+SSMQ++
Sbjct: 69 ATARLEEFAD-------RTHLFHLPFSRFEEALDELGWE----GIDGAVLDLGVSSMQLD 117
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
+RGFS + DGPLDMRM+P+ A D++N+ ++ R++R +GE+ + + I++
Sbjct: 118 EADRGFSFINDGPLDMRMNPEHGQSAADLVNTLKHGDLARIIRTWGEDPLAGKIASAILR 177
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + + T +L ++++ P + R ATR FQ LRIAVN E + LE L
Sbjct: 178 AREKEAITRTLQLAEIVRLAYPP-KMRHAARNHPATRTFQGLRIAVNRETEELEYYLKTI 236
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
D L PG RL +ISFHSLEDR VK +F R+ A+G + Q
Sbjct: 237 VDRLNPGARLAIISFHSLEDRAVKHSF-------RDAAKG-------------CKCPSHQ 276
Query: 414 IIQGWNG----KILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ +G K+LTK+P+ PS EE ++N R RSAKLRV +K+
Sbjct: 277 LHCTCDGVPAVKVLTKKPLIPSEEEMQVNSRSRSAKLRVCEKL 319
>gi|70726737|ref|YP_253651.1| S-adenosyl-methyltransferase MraW [Staphylococcus haemolyticus
JCSC1435]
gi|88909220|sp|Q4L5N0.1|RSMH_STAHJ RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|68447461|dbj|BAE05045.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 311
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 122/335 (36%), Positives = 174/335 (51%), Gaps = 30/335 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI VML E +D + + +VDCTLG AGH+ ++ + I +D D +AL A+
Sbjct: 4 HISVMLNETID-YLDIKEDGIYVDCTLGGAGHALYLLNQLNDDGRLIAIDQDTTALDNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L LH H NFR + +L +N+ VD I DLG+SS Q++ P
Sbjct: 63 EVLKDHLHKVTFVH-------SNFRELTDIL----KNLNIEKVDGIYYDLGVSSPQLDVP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D LDMRMD L A +++N WP + ++ YGEE + +I R
Sbjct: 112 ERGFSYHHDAKLDMRMDQTQQLSAYEVVNQWPYEALVKIFYRYGEEKFSKQIARRIETHR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +T ELVD+I+ P + RR+G A RVFQA+RIAVNDEL E S+ +
Sbjct: 172 EHQPIETTLELVDIIKEGIPA-KARRKGG-HPAKRVFQAIRIAVNDELSAFEDSIEQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
+ GGR+ VI+FHSLEDR+ KQ F ++ E + R + I E + ++
Sbjct: 230 LVKVGGRISVITFHSLEDRLCKQMF--------QEYEKGPDVPRGL--PIIPEAYTPKL- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
K + ++PIT + + N R RSAKLRV +
Sbjct: 279 -----KRVNRKPITATDTDLDENNRARSAKLRVAE 308
>gi|373853959|ref|ZP_09596757.1| Ribosomal RNA small subunit methyltransferase H [Opitutaceae
bacterium TAV5]
gi|372471826|gb|EHP31838.1| Ribosomal RNA small subunit methyltransferase H [Opitutaceae
bacterium TAV5]
Length = 325
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 129/342 (37%), Positives = 174/342 (50%), Gaps = 27/342 (7%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
+ +HIPV+L VL++ + ++DCT G GH+ A++ A P ++ + +D DP+AL
Sbjct: 9 EPAHIPVLLQPVLELLAPY-ADGRYLDCTFGGGGHTRALLDAAPRTRI-VALDRDPAALP 66
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAK--NFRHIKSVLGQIDENILRSGVDAILMDLGMSSM 230
+A A G L F + L I E G D IL DLG+SS
Sbjct: 67 RAAALREEF--GSGRFELIDRDFGRLGELAREHPALVAIREG---KGFDGILFDLGVSSF 121
Query: 231 QVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNK 290
Q+++ RGFS D P DMRMDP++ + A L + D + R +R+YGEE + +
Sbjct: 122 QLDDTARGFSFRNDAPADMRMDPRSGVPASLWLETATDEMLFRAIRDYGEERHASRVVRA 181
Query: 291 IVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSL 350
I +AR G L T L LI + P R R I ATR FQ +RIAVNDEL LE +L
Sbjct: 182 IKEARGTGALARTASLAGLIAAAIPA-RDRFASKIHPATRSFQGIRIAVNDELGALERAL 240
Query: 351 HACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETW 410
A F L GG L VISFHSLEDR VKQ F + G E + R ++ E
Sbjct: 241 PAAFGLLRSGGVLAVISFHSLEDRPVKQAFRRLC--------GQPESQEDHRPADLREK- 291
Query: 411 IRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ LT++P+TP E N R RSAKLR I+K+
Sbjct: 292 --------AAEPLTRKPVTPDDAELAANPRARSAKLRAIRKL 325
>gi|337748314|ref|YP_004642476.1| protein RsmH [Paenibacillus mucilaginosus KNP414]
gi|379723230|ref|YP_005315361.1| protein RsmH [Paenibacillus mucilaginosus 3016]
gi|386725953|ref|YP_006192279.1| 16S rRNA m(4)C1402 methyltransferase [Paenibacillus mucilaginosus
K02]
gi|336299503|gb|AEI42606.1| RsmH [Paenibacillus mucilaginosus KNP414]
gi|378571902|gb|AFC32212.1| RsmH [Paenibacillus mucilaginosus 3016]
gi|384093078|gb|AFH64514.1| 16S rRNA m(4)C1402 methyltransferase [Paenibacillus mucilaginosus
K02]
Length = 319
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 127/321 (39%), Positives = 167/321 (52%), Gaps = 33/321 (10%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
+VDCTLG AGHS I L I D D AL A+ L A +
Sbjct: 25 YVDCTLGGAGHSREIASRLGPGGLLIAFDQDDIALNNAKVQL-------AEFGDRVRLVR 77
Query: 197 KNFRHIKSVLGQIDENILRSGV---DAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDP 253
NFR ++ L +I E +L+ GV D IL DLG+SS Q++ +RGFS D LDMRMD
Sbjct: 78 SNFRFLERELSKIPE-VLKDGVPQVDGILFDLGVSSPQLDEADRGFSYNHDAELDMRMDR 136
Query: 254 QASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSV 313
+ L A+DI+N W + E+ ++L EYGEE + +KI AR + +TG+L +L++
Sbjct: 137 TSPLTAKDIVNDWDEKEIAQILFEYGEEKFARRIASKIAAARAAAPIETTGQLAELVKEG 196
Query: 314 TPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLED 373
P RR G A R FQALRIAVNDEL E +L CLAPGGR VI+FHSLED
Sbjct: 197 IPAA-ARRTGG-HPAKRSFQALRIAVNDELGAFEEALEQTIRCLAPGGRAAVITFHSLED 254
Query: 374 RIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNG--KILTKRPITPS 431
RI KQTF + ++ + G G K++ ++PI
Sbjct: 255 RICKQTFNKYVARCTCPSD------------------FPMCVCGTKGTVKLINRKPIEAG 296
Query: 432 AEEERLNCRCRSAKLRVIQKI 452
EE N R RSAKLR+ +K+
Sbjct: 297 GEELGANPRARSAKLRIAEKL 317
>gi|29840135|ref|NP_829241.1| S-adenosyl-methyltransferase MraW [Chlamydophila caviae GPIC]
gi|33301363|sp|Q823N6.1|RSMH_CHLCV RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|29834483|gb|AAP05119.1| S-adenosyl-methyltransferase MraW [Chlamydophila caviae GPIC]
Length = 297
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 125/337 (37%), Positives = 169/337 (50%), Gaps = 49/337 (14%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HIPV++ E L FS R SF D T+GA GH+ A + +P + + G D D +AL+ AR
Sbjct: 7 HIPVLVNECLSWFSD-RNPRSFCDVTVGAGGHAEAFLSTYPSIISYDGSDRDATALSLAR 65
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L HL +F + + EN+ D IL DLG+SSMQ++
Sbjct: 66 ERLEKF---GDRVHLHHASF-------EDLAQDPKENVY----DGILADLGVSSMQLDTL 111
Query: 236 ERGFSVLG-DGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
RGFS G D LDMRMD + A ++LN+ + E+G++ REYGEE +W + N IV
Sbjct: 112 SRGFSFQGEDHDLDMRMDTSQGITASEVLNTLREEELGKIFREYGEEPHWKNVANAIVHF 171
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R R + + +L + V P R R++ I T +FQALR+ VN E L+ L +
Sbjct: 172 RRRKKIITVKDLKEATARVFPSYRLRKK--IHPLTLIFQALRVYVNQEDVQLKVLLESAM 229
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
LAP GRL +ISF S EDR VK F R+
Sbjct: 230 RWLAPKGRLVIISFCSSEDRPVKWFF-------------------------------REA 258
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ GKILTK+ + P+ EE R N RCRSAKLR +K
Sbjct: 259 EKSGLGKILTKKVVMPTYEEIRRNPRCRSAKLRCFEK 295
>gi|296166032|ref|ZP_06848481.1| S-adenosyl-methyltransferase MraW [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295898597|gb|EFG78154.1| S-adenosyl-methyltransferase MraW [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 334
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 110/276 (39%), Positives = 154/276 (55%), Gaps = 18/276 (6%)
Query: 116 HIPVMLGEVLDVFSSSRTI-------TSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDP 168
H+PV+LG +++ + + T +D TLGA GH+ + P L+L IG+D DP
Sbjct: 10 HVPVLLGRCVELLTPALTRHDADGSGAVLLDATLGAGGHAERFLTDLPGLRL-IGLDRDP 68
Query: 169 SALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMS 228
+AL RA L H + A +S G I+ VD +L DLG+S
Sbjct: 69 NALEITRARLARFADRITLVHTRYDGLAAAL--AESGYGAIES------VDGMLFDLGVS 120
Query: 229 SMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQ 288
SMQ++ ERGF+ D PLDMRMDP++ L A DILN++ +A + +L YGEE +
Sbjct: 121 SMQLDRAERGFAYAQDAPLDMRMDPESPLTAADILNTYDEAALADILHRYGEERFARRIA 180
Query: 289 NKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLES 348
++V+ R R ST +LV L+ P RR G A R FQALRIAVNDEL +L +
Sbjct: 181 AQVVRRRARAPFASTADLVALLYQAIPAP-ARRTGG-HPAKRTFQALRIAVNDELNSLRA 238
Query: 349 SLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSII 384
+ A D LA GGR+ V+++ SLEDRIVK+ F + +
Sbjct: 239 ATPAGLDALAVGGRMVVLAYQSLEDRIVKRLFAAAV 274
>gi|160915591|ref|ZP_02077802.1| hypothetical protein EUBDOL_01601 [Eubacterium dolichum DSM 3991]
gi|158432711|gb|EDP11000.1| S-adenosyl-methyltransferase MraW [Eubacterium dolichum DSM 3991]
Length = 311
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 121/342 (35%), Positives = 182/342 (53%), Gaps = 36/342 (10%)
Query: 114 SSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAK 173
S H V+L E L+ + R +VD TLG GHS+ I++ P+ L+ D D +A+ +
Sbjct: 2 SKHYSVLLSECLEGLAI-RADGIYVDGTLGRGGHSAQILQRIPKGHLY-AFDRDETAIKE 59
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGV---DAILMDLGMSSM 230
++ L S+ A NF I + + E + G+ D +L+DLG+SS
Sbjct: 60 SKERLLSI--------------ASNFTLIHNQFSMLKEELSNRGIYQIDGMLLDLGVSSP 105
Query: 231 QVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNK 290
Q ++ ERGFS D PLDMRMD A D++NS+ E+ R+ +YGEE +
Sbjct: 106 QFDDGERGFSYRYDAPLDMRMDQSQQKNAYDVVNSYDYHELVRIFYQYGEEKFAKQIAKN 165
Query: 291 IVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSL 350
I + R + +T ELV++I++ P ++G A +VFQA+RI VNDELK +E+ L
Sbjct: 166 IEKQRAIKPIATTFELVEVIKASLPAKVLNKKGH--PAKKVFQAIRIEVNDELKEIETVL 223
Query: 351 HACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETW 410
D LA GGRL VISF SLEDRIVK+ F H R + ++ +
Sbjct: 224 QDAMDMLAVGGRLCVISFQSLEDRIVKEAF-----HERSTPKKVDKRI----------PM 268
Query: 411 IRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ Q I+ + +++ ++PI S EE N R SAKLR+I+++
Sbjct: 269 LPQDIETVDYRLVNRKPIIASEEELEENNRSHSAKLRIIERV 310
>gi|332836127|ref|XP_003313021.1| PREDICTED: methyltransferase like 15 isoform 1 [Pan troglodytes]
gi|410217678|gb|JAA06058.1| methyltransferase like 15 [Pan troglodytes]
gi|410292610|gb|JAA24905.1| methyltransferase like 15 [Pan troglodytes]
Length = 407
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 128/371 (34%), Positives = 197/371 (53%), Gaps = 41/371 (11%)
Query: 100 NKDYDYESIIQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELK 159
++D D+E++ + HIPVM+ EV+ S + F+D T G+ GH+ AI++ ++
Sbjct: 60 SQDRDFETMAK----LHIPVMVDEVVHCLSPQKG-QIFLDMTFGSGGHTKAILQKESDIV 114
Query: 160 LHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGV- 218
L+ +D DP+A A A HL+ L + K R + Q + ++++GV
Sbjct: 115 LY-ALDRDPTAYALAE-HLSEL-------------YPKQIRAMLGQFSQAEALLMKAGVQ 159
Query: 219 ----DAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMD----PQASLKAEDILNSWPDAE 270
D +LMDLG SSMQ++ PERGFS+ DGPLDMRMD P A D++N+
Sbjct: 160 PGTFDGVLMDLGCSSMQLDTPERGFSLRKDGPLDMRMDGGRYPDMP-TAADVVNALDQQA 218
Query: 271 VGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTP--GMRGRR---QGWI 325
+ +LR YGEE + + + IVQAR + T +L ++ P + R+ Q
Sbjct: 219 LASILRTYGEEKHAKKIASAIVQARSIYPITRTQQLAGIVAGAFPPSAVYTRKDLLQRST 278
Query: 326 KTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIID 385
AT+ FQALRI VN+EL L + L L PGGRL +SFHSLEDRIVK+ L I
Sbjct: 279 HIATKTFQALRIFVNNELNELYTGLKTAQKFLRPGGRLVALSFHSLEDRIVKRFLLGISM 338
Query: 386 HNREDAEGNEEELRNIR----DDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRC 441
R + ++ ++ + +N E +R+ W +++ K+ ++P ++ + N R
Sbjct: 339 TERFNLSVRQQVMKTSQLGSDHENTEEVSMRRAPLMW--ELIHKKVLSPQDQDVQDNPRG 396
Query: 442 RSAKLRVIQKI 452
RSAKLR K+
Sbjct: 397 RSAKLRAAIKL 407
>gi|329115569|ref|ZP_08244291.1| Ribosomal RNA small subunit methyltransferase H [Acetobacter
pomorum DM001]
gi|326694997|gb|EGE46716.1| Ribosomal RNA small subunit methyltransferase H [Acetobacter
pomorum DM001]
Length = 335
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 126/340 (37%), Positives = 183/340 (53%), Gaps = 35/340 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHI-GVDVDPSALAKA 174
HIPVML EVL+ + +DCT G G+SSAI+++ ++ G+D DP A+A+
Sbjct: 16 HIPVMLPEVLEYLYPADG-GRILDCTFGGGGYSSAILKS---ADCNVWGIDRDPDAIARG 71
Query: 175 RA---HLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQ 231
+A H + +G + H+ +F N + + S G S D I++DLG+SS Q
Sbjct: 72 QALSRHFPAA-NGTSRLHMLQGSFG-NMQALASAAGI-------STFDGIVLDLGVSSFQ 122
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ +RGFS +GPLDMRM+ ++ A DI+N P+AE+ + YGEE + L +
Sbjct: 123 LDEADRGFSFRMEGPLDMRME-KSGPSAADIVNKAPEAELADIFHFYGEERHARRLARAV 181
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
V AR +T +L +L++SV P + + I +ATR FQ LRIAVNDEL +E L
Sbjct: 182 VNARSEMPFETTTQLANLVRSVIP----KDRSGIDSATRAFQGLRIAVNDELGEIERGLE 237
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
D LAPGGRL V+SFHSLEDRI K+ ++ H A G ++ D T
Sbjct: 238 QALDMLAPGGRLVVVSFHSLEDRIAKR----MVQH----ATGKDKSFSRY-DPRAAGTPA 288
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ + LT + P+ E N R RSA+LR + K
Sbjct: 289 PEA----DFVALTHKARRPTDTECSYNPRARSARLRAVMK 324
>gi|20138864|sp|O07665.2|RSMH_ENTHR RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|2624083|emb|CAA74239.1| mraW [Enterococcus hirae]
Length = 319
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 127/340 (37%), Positives = 178/340 (52%), Gaps = 35/340 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H VML E +D + + +VDCTLG AGHS ++ D D A+ A+
Sbjct: 7 HYTVMLKETVDGLNI-KPDGIYVDCTLGGAGHSEYLLSQLNTNGHLYAFDQDQKAIDHAK 65
Query: 176 AHLNSLLHGQAHPHLKTH--TFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
L P+++ TF K NFR +++ +I E++ VD IL DLG+SS Q+
Sbjct: 66 VRLA--------PYIEKGMVTFIKANFRELEA---KIKEHV--PQVDGILYDLGVSSPQL 112
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ ERGFS D PLDMRMD A L A D++N + E+ ++ YGEE + +I
Sbjct: 113 DEAERGFSYHQDAPLDMRMDQSAPLSAYDVVNEYSYNELVKIFFRYGEEKFSKQIAREIE 172
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
+ R + +TGELV++I+ V P R+ G A R+FQA+RIAVNDEL E+SL
Sbjct: 173 RVRKIHPIQTTGELVEIIKDVIPAPARRKGGH--PAKRIFQAIRIAVNDELGAEEASLEQ 230
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
L GR+ VI+FHSLEDRIVK F +E ++D +
Sbjct: 231 AIRLLKINGRISVITFHSLEDRIVKSMF---------------KEYSTVQDLPPGLPVVP 275
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ Q K++ ++PI PS EE N R RSAKLR+ +KI
Sbjct: 276 EEFQP-ELKLINRKPILPSEEELSENNRSRSAKLRIAEKI 314
>gi|381181309|ref|ZP_09890143.1| S-adenosyl-methyltransferase MraW [Treponema saccharophilum DSM
2985]
gi|380766529|gb|EIC00534.1| S-adenosyl-methyltransferase MraW [Treponema saccharophilum DSM
2985]
Length = 335
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 124/343 (36%), Positives = 167/343 (48%), Gaps = 32/343 (9%)
Query: 116 HIPVMLGEVLDVFSSS----RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
H PV+L E L S + VD TLG GHS A + A+P L + IG+D D +
Sbjct: 5 HTPVLLNECLSYLSPVGEPFESSALMVDSTLGEGGHSEAFLSAYPGLSV-IGLDADSTIQ 63
Query: 172 AKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQ 231
++A+ L + + F F G+ D+ D IL DLG+S
Sbjct: 64 SRAKERLARFSSAG-----RMNFFNGWFNDFYGRYGEHDDITGGRRPDIILFDLGISVYH 118
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
RGFS D PLDMR++ + A DI+N + E+ ++ Y +E + I
Sbjct: 119 YERSGRGFSFRHDEPLDMRLNDREGESAADIVNGMREEELANLIYLYSDEKMSRRIARAI 178
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
+AR G + S+ L DLI PG R G I ATR FQALRIAVN EL+ L S++H
Sbjct: 179 CEARASGRIESSKALADLIYDAVPG--NYRHGAIHPATRTFQALRIAVNSELRRLPSAIH 236
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
F+ L PGG+LGVI+FHSLEDRIVK F RN+ +
Sbjct: 237 DAFNVLLPGGKLGVITFHSLEDRIVKNYF------------------RNLGRKCVCPPGR 278
Query: 412 RQIIQGWN--GKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
G +ILT++P+ P+ EE N RSAKLRV++KI
Sbjct: 279 AVCTCGGEPCAEILTRKPVEPTKEEVESNSPSRSAKLRVVRKI 321
>gi|374301722|ref|YP_005053361.1| Ribosomal RNA small subunit methyltransferase H [Desulfovibrio
africanus str. Walvis Bay]
gi|332554658|gb|EGJ51702.1| Ribosomal RNA small subunit methyltransferase H [Desulfovibrio
africanus str. Walvis Bay]
Length = 328
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 129/344 (37%), Positives = 183/344 (53%), Gaps = 30/344 (8%)
Query: 110 QQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPS 169
+Q + HI V+L E L+ F + R ++D TLG GHS AI+ + +G+D D
Sbjct: 9 EQGEHGHISVLLAETLE-FLAPRPGGRYLDGTLGLGGHSEAILELAGQGAELLGLDRDAQ 67
Query: 170 ALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSS 229
AL +AR L GQA H + ++ + EN+ +D ++DLG+SS
Sbjct: 68 ALERARTRLARF--GQA-----AHLVQAPYSSFEAEM----ENLGWDLLDGAVLDLGISS 116
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQA-SLKAEDILNSWPDAEVGRVLREYGEESNWHLLQ 288
+QV+ ERGFS + +GPLDMRMDP + + A I+N + ++R+ GEE +
Sbjct: 117 LQVDLAERGFSFMAEGPLDMRMDPDSGAAPASQIVNKASCERLKEIIRDLGEEPMAGRIA 176
Query: 289 NKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLES 348
IV+AR + +T EL ++ P + RR ATR FQALR+AVN EL+ LES
Sbjct: 177 RAIVEARQDKEIETTLELAAIVARAYPA-KWRRTARNHPATRTFQALRMAVNSELEELES 235
Query: 349 SLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE 408
L D L PGGR+ VISFHSLEDR+VK F REDA + R R +
Sbjct: 236 FLSRITDRLRPGGRVVVISFHSLEDRLVKWAF-------REDA----RKCRCPRTQPFCD 284
Query: 409 TWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ + K+LTK+P+ PS +E N R RSAKLR +++
Sbjct: 285 CGGQPRL-----KLLTKKPLAPSEQEMAANPRSRSAKLRAAERV 323
>gi|418601270|ref|ZP_13164708.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21345]
gi|374399097|gb|EHQ70245.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21345]
Length = 311
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 124/335 (37%), Positives = 174/335 (51%), Gaps = 30/335 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI VML E +D + ++DCTLG AGH+ ++ + I +D D +A+ A+
Sbjct: 4 HISVMLNETIDYLNVKEN-GVYIDCTLGGAGHALYLLNQLNDDGRLIAIDQDQTAIDNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L LH H NFR + +L D NI VD I DLG+SS Q++ P
Sbjct: 63 EVLKDHLHKVTFVH-------SNFRELTQILK--DLNI--EKVDGIYYDLGVSSPQLDIP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D LDMRMD L A +I+N+W + ++ YGEE + +I R
Sbjct: 112 ERGFSYHHDATLDMRMDQTQELTAYEIVNNWSYEALVKIFYRYGEEKFSKQIARRIEAHR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +T ELVD+I+ P + RR+G A RVFQALRIAVNDEL E S+ +
Sbjct: 172 EQQPITTTLELVDIIKEGIPA-KARRKGG-HPAKRVFQALRIAVNDELSAFEDSIEQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
+ GR+ VI+FHSLEDR+ KQ F ++ E E R + I E + ++
Sbjct: 230 LVKVDGRISVITFHSLEDRLCKQVF--------QEYEKGPEVPRGL--PVIPEAYTSKL- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
K + ++PIT + E+ N R RSAKLRV +
Sbjct: 279 -----KRVNRKPITATEEDLDDNNRARSAKLRVAE 308
>gi|118581697|ref|YP_902947.1| S-adenosyl-methyltransferase MraW [Pelobacter propionicus DSM 2379]
gi|262824775|sp|A1AU69.1|RSMH_PELPD RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|118504407|gb|ABL00890.1| S-adenosyl-methyltransferase MraW [Pelobacter propionicus DSM 2379]
Length = 313
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 135/349 (38%), Positives = 181/349 (51%), Gaps = 53/349 (15%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAII-RAHPELKLHIGVDVDPSALAKA 174
H+ VM EVL F S R ++D TLG GH++ + R P IG+D D AL A
Sbjct: 6 HLSVMPEEVLR-FLSPRPGGCYLDGTLGGGGHAALVAERCAPGGGTLIGMDRDLEALKAA 64
Query: 175 RAHLNS------LLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMS 228
L+ LLHG NF I + L + + L D ++DLG+S
Sbjct: 65 AERLSRFGDAVRLLHG-------------NFADIATRLDSLGVDAL----DGFVLDLGVS 107
Query: 229 SMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQ 288
S Q++ RGFS +G LDMRMD + A D++N P+ E+ R++REYGEE +
Sbjct: 108 SHQLDTARRGFSFQQEGALDMRMDGDSGETAADLVNRLPEHELERIIREYGEERWAKRIA 167
Query: 289 NKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLES 348
+ IV+AR + +T LVD+I+ P + + + + ATR FQALRIAVN EL++LE
Sbjct: 168 SFIVRARSEAPIENTLRLVDIIKGAIP--KAKWEERLHPATRTFQALRIAVNHELESLER 225
Query: 349 SLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE 408
L + D L PGGR VISFHSLEDRIVK F RE A G
Sbjct: 226 GLKSAIDRLKPGGRGVVISFHSLEDRIVKHVF-------REYAAGC-------------- 264
Query: 409 TWIRQIIQGWNG-----KILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
T R + G ++LT RP+T + EE R N R RSAKLR ++K+
Sbjct: 265 TCPRNLPVCVCGRQPRVRVLTGRPVTATEEELRDNPRSRSAKLRAVEKL 313
>gi|73748191|ref|YP_307430.1| S-adenosyl-methyltransferase MraW [Dehalococcoides sp. CBDB1]
gi|147668966|ref|YP_001213784.1| S-adenosyl-methyltransferase MraW [Dehalococcoides sp. BAV1]
gi|289432241|ref|YP_003462114.1| S-adenosyl-methyltransferase MraW [Dehalococcoides sp. GT]
gi|452203193|ref|YP_007483326.1| ribosomal RNA small subunit methyltransferase H [Dehalococcoides
mccartyi DCMB5]
gi|88909198|sp|Q3ZZA4.1|RSMH_DEHSC RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|263446194|sp|A5FSB7.1|RSMH_DEHSB RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|73659907|emb|CAI82514.1| S-adenosyl-methyltransferase MraW [Dehalococcoides sp. CBDB1]
gi|146269914|gb|ABQ16906.1| S-adenosyl-methyltransferase MraW [Dehalococcoides sp. BAV1]
gi|288945961|gb|ADC73658.1| S-adenosyl-methyltransferase MraW [Dehalococcoides sp. GT]
gi|452110252|gb|AGG05984.1| ribosomal RNA small subunit methyltransferase H [Dehalococcoides
mccartyi DCMB5]
Length = 349
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 135/341 (39%), Positives = 180/341 (52%), Gaps = 43/341 (12%)
Query: 116 HIPVMLGEV---LDVFSSSRTITSFVDCTLGAAGHSSAIIR-AHPELKLHIGVDVDPSAL 171
HIPVML E L V R +VDCTLGA GHS AI+ ++P +L + +D DPSA+
Sbjct: 6 HIPVMLEESIQGLGVIPGGR----YVDCTLGAGGHSEAILEHSYPGGQL-LSIDADPSAI 60
Query: 172 AKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQ 231
A L S G + NF ++K + + + V IL DLG+SSMQ
Sbjct: 61 TLAAERLKSF--GSS-----VLLVNDNFANLKDICQRYE----YMPVHGILFDLGLSSMQ 109
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ E GFS + PLDMR P+ L A DI+N + E+ ++ +YGEE + I
Sbjct: 110 LDRQESGFSFQTEAPLDMRFSPEQELTAADIINGYDVTELSDLIWKYGEEPFSRRIARAI 169
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
+ R +T EL I+ G R G I ATR FQALRIAVN+EL LES+L
Sbjct: 170 AEKR---PFKTTTELAAAIERAVGG----RHGRIHPATRTFQALRIAVNEELSHLESALS 222
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
L GGRL VIS+HSLEDRIVKQ F +++A+G I D+I +
Sbjct: 223 QAHSLLGHGGRLVVISYHSLEDRIVKQYF-------QKEAKG------CICPDDIPQCVC 269
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ +I+ +R ITPS EE N R RSAK+RV ++I
Sbjct: 270 D---HQPSLRIINRRVITPSDEEISRNPRSRSAKMRVAERI 307
>gi|119512962|ref|ZP_01632023.1| S-adenosyl-methyltransferase [Nodularia spumigena CCY9414]
gi|119462375|gb|EAW43351.1| S-adenosyl-methyltransferase [Nodularia spumigena CCY9414]
Length = 302
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 123/341 (36%), Positives = 169/341 (49%), Gaps = 65/341 (19%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+PV+ EV++ + R ++D T+G GHS I+ A +++L +D D AL A+
Sbjct: 15 HVPVLSQEVVEGLAV-RPGGHYLDATVGGGGHSRLILEAATDVRL-TAIDQDEDALGAAQ 72
Query: 176 AHLNSLLHGQ----AHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQ 231
HL G H + + ++ N D IL DLG+SS
Sbjct: 73 KHLAEF--GDRVEFIHSNFSAYKYSPN------------------TFDGILADLGVSSYH 112
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ PERGFS LDMRM+ Q SL A D++N W +AE+ + +YGEE + +I
Sbjct: 113 LDQPERGFSFRHAANLDMRMNQQQSLTAADVINEWDEAELADIFFKYGEERLSRRIARRI 172
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
V+ R +T EL + I P R R G I ATRVFQALRI VNDELK LE+ L
Sbjct: 173 VEKR---PFETTTELAEAIAYSVP--RQYRYGRIHPATRVFQALRIVVNDELKALETFLD 227
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
+ L PGGR+ +ISFHSLEDR VK +R+ ++
Sbjct: 228 QAPNALVPGGRIAIISFHSLEDRPVKH---------------------GLRNSSLL---- 262
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
K+LTK+PIT EE N R RSAKLR+ Q++
Sbjct: 263 ---------KVLTKKPITAKEEELANNPRSRSAKLRIAQRV 294
>gi|374307648|ref|YP_005054079.1| S-adenosyl-methyltransferase MraW [Filifactor alocis ATCC 35896]
gi|291166340|gb|EFE28386.1| S-adenosyl-methyltransferase MraW [Filifactor alocis ATCC 35896]
Length = 310
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 122/334 (36%), Positives = 180/334 (53%), Gaps = 35/334 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H PVML E +D+ + + +VD TLG AGHS I++ KL I D D A+ A+
Sbjct: 5 HKPVMLNECIDMLNIVPS-GIYVDGTLGGAGHSLEIVKRLDSGKL-IAFDQDIEAIKNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L S K NFR+IK L ID I R ++ +L+DLG+SS Q+++P
Sbjct: 63 IKLKSY-------EDKVILIHDNFRNIKKSLEDID--IFR--INGLLLDLGVSSYQLDSP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRM+ + + A+ I+N++ + ++ R++R+YGEE + IV+ R
Sbjct: 112 ERGFSYRYDAPLDMRMNQSSQISAKYIVNTYSEEDLKRIIRDYGEEKWASRIAQFIVEER 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
++ + +TGELV +I++ P + R+ A R FQA+RI N EL + L + +
Sbjct: 172 MKKPIDTTGELVQIIKAAIP--KKAREEEQHPAKRTFQAIRIETNHELDVIHDVLESAVE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L PGG + VI+FHSLEDRIVK F R+++ G I I +
Sbjct: 230 LLLPGGVISVITFHSLEDRIVKNFF-------RDESTG-----------CICSPEIPVCV 271
Query: 416 QGWNGKILT--KRPITPSAEEERLNCRCRSAKLR 447
++ ++P+ PS EE R N R RSAK+R
Sbjct: 272 CNHQARLRLAHRKPLVPSEEELRENPRSRSAKVR 305
>gi|262037275|ref|ZP_06010755.1| S-adenosyl-methyltransferase MraW [Leptotrichia goodfellowii F0264]
gi|261748703|gb|EEY36062.1| S-adenosyl-methyltransferase MraW [Leptotrichia goodfellowii F0264]
Length = 307
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 118/340 (34%), Positives = 180/340 (52%), Gaps = 41/340 (12%)
Query: 116 HIPVMLGEVLD-VFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
H PV+ EV++ + + I +VDCTLG GH+ I+++ + I +D D A+ A
Sbjct: 4 HKPVLFDEVMENIIKKEKAI--YVDCTLGGGGHTEGILKSSSDDSKVIAIDQDIEAINFA 61
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+ L + +G K F NFR+I +V+ N VD ILMD+G+SS Q++N
Sbjct: 62 KKRLEN--YGN-----KMEIFQDNFRNIDTVVYFAGFN----KVDRILMDIGVSSNQLDN 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS + LDMRM+ + S+ A D++N + + E+ ++ +YGEE + IV+
Sbjct: 111 IERGFSYKYEAKLDMRMNKELSVSAYDVVNKFAEKEIADIIYKYGEEPKSRKIAKNIVEY 170
Query: 295 RLRGGLHSTGELVDL-IQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
R + +T EL D+ I+S+ M+ + R FQA+RI VN EL+ LE +L
Sbjct: 171 RKNKNIETTVELSDIVIKSIGKSMKKH------PSKRTFQAIRIFVNKELEVLEEALDKA 224
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNI--NETWI 411
+ L GG+L VI+FHSLEDR+VK+ F R + + E +
Sbjct: 225 VNLLNKGGKLLVITFHSLEDRMVKEKF------------------RKYENPCVCPPELPV 266
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ GKI+TK+PIT EE +N R SAKLR+ ++
Sbjct: 267 CVCKKESLGKIVTKKPITAKNEELEINNRAHSAKLRIFER 306
>gi|82750786|ref|YP_416527.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus RF122]
gi|123549021|sp|Q2YXE3.1|RSMH_STAAB RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|82656317|emb|CAI80731.1| S-adenosyl-methyltransferase [Staphylococcus aureus RF122]
Length = 311
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 124/335 (37%), Positives = 174/335 (51%), Gaps = 30/335 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI VML E +D + ++DCTLG AGH+ ++ + I +D D +A+ A+
Sbjct: 4 HISVMLNETIDYLNVKEN-GVYIDCTLGGAGHALYLLNQLNDDGRLIAIDQDQTAIDNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L LH H NFR + +L D NI VD I DLG+SS Q++ P
Sbjct: 63 KVLKEHLHKVTFVH-------SNFRELTQILK--DLNI--EKVDGIYYDLGVSSPQLDIP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D LDMRMD L A +I+N+W + ++ YGEE + +I R
Sbjct: 112 ERGFSYHHDATLDMRMDQTQELTAYEIVNNWSYEALVKIFYRYGEEKFSKQIARRIEAHR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +T ELVD+I+ P + RR+G A RVFQALRIAVNDEL E S+ +
Sbjct: 172 EQQPITTTLELVDIIKEGIPA-KARRKGG-HPAKRVFQALRIAVNDELSAFEDSIEQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
+ GR+ VI+FHSLEDR+ KQ F ++ E E R + I E + ++
Sbjct: 230 LVKVDGRISVITFHSLEDRLCKQVF--------QEYEKGPEVPRGL--PVIPEAYTPKL- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
K + ++PIT + E+ N R RSAKLRV +
Sbjct: 279 -----KRINRKPITATEEDLDDNNRARSAKLRVAE 308
>gi|414597031|ref|ZP_11446602.1| Ribosomal RNA small subunit methyltransferase H [Leuconostoc
citreum LBAE E16]
gi|421876582|ref|ZP_16308138.1| Ribosomal RNA small subunit methyltransferase H [Leuconostoc
citreum LBAE C10]
gi|421878270|ref|ZP_16309752.1| Ribosomal RNA small subunit methyltransferase H [Leuconostoc
citreum LBAE C11]
gi|372557659|emb|CCF24258.1| Ribosomal RNA small subunit methyltransferase H [Leuconostoc
citreum LBAE C10]
gi|390447884|emb|CCF25872.1| Ribosomal RNA small subunit methyltransferase H [Leuconostoc
citreum LBAE C11]
gi|390482145|emb|CCF28663.1| Ribosomal RNA small subunit methyltransferase H [Leuconostoc
citreum LBAE E16]
Length = 315
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 126/345 (36%), Positives = 182/345 (52%), Gaps = 47/345 (13%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E + + + + T T +VD TLG GH+ I++ KL+ D D +A+
Sbjct: 8 HVTVLLHEAVALLAINPTGT-YVDATLGGGGHTGEILKQLTTGKLY-SFDQDDTAI---- 61
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
N + K +NFR +K L + +++ + VD I+ DLG+SS+Q ++
Sbjct: 62 -KYNQTRYADEIAAGKLILIHQNFRQLKVALAE--QHV--TAVDGIVYDLGVSSVQFDDG 116
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
+RGFS D LDMRMD + +L A+ I+N WP ++ RVL YGE+ + KI Q R
Sbjct: 117 QRGFSYNYDAELDMRMDQRQTLTAKTIVNDWPFNDILRVLSRYGEDRFPKQVARKIEQHR 176
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+G +++T ELVD+I+ P R+ G A R FQALR+AVNDEL LE SL +
Sbjct: 177 DKGPINTTFELVDIIKEAIPAPARRKGG--HPAKRTFQALRVAVNDELGALEDSLTQALE 234
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
LAP GR+ VI+F SLEDR+VKQ F RE +T + +
Sbjct: 235 LLAPSGRISVITFQSLEDRLVKQMF-------RE------------------KTSMPDLP 269
Query: 416 QGW---------NGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
G + K+LT++PI PS E N R SAKLR I++
Sbjct: 270 AGLPVLPGQFEPDYKLLTRKPILPSETEMTDNHRSESAKLRGIER 314
>gi|385810789|ref|YP_005847185.1| S-adenosylmethionine-dependent methyltransferase [Ignavibacterium
album JCM 16511]
gi|383802837|gb|AFH49917.1| Putative S-adenosylmethionine-dependent methyltransferase
[Ignavibacterium album JCM 16511]
Length = 307
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 121/337 (35%), Positives = 170/337 (50%), Gaps = 34/337 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H PV+L E +D+ + ++ S+ D TLG GHS AI++ I DVD +A +
Sbjct: 5 HAPVLLNESVDLLITDKS-GSYFDATLGFGGHSEAILQKLDSKGKLIATDVDENAFNYCK 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
+ + + F NF + V+ +I+ D IL DLG+SS Q+++P
Sbjct: 64 EKFKN------DKRVSLYKF--NFSMV-DVIAKIES---LQAFDGILADLGVSSFQLDDP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
+ GF+ + LD+RMD A D +N + E+ + R+YGEE N+ + IV R
Sbjct: 112 DSGFTFRTETLLDLRMDKTKKQTAADAVNELSEEELSLIFRDYGEERNYKKIARAIVNNR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +T +L +I TP KT +RVFQALRI VNDEL L+ L D
Sbjct: 172 EIKKIKTTTDLKKIISEFTPV-----NYLTKTLSRVFQALRIYVNDELNMLKEFLERSVD 226
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L PGGRL VIS+HSLEDRIVK F NE +I + E +
Sbjct: 227 VLKPGGRLVVISYHSLEDRIVKDFF------------RNE----SITTLSPKEDPFGLLS 270
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ KILTK+P+ PS EE R N R RSAKLR +++
Sbjct: 271 KSARLKILTKKPLLPSKEEVRRNRRARSAKLRAAERL 307
>gi|328950951|ref|YP_004368286.1| ribosomal RNA small subunit methyltransferase H [Marinithermus
hydrothermalis DSM 14884]
gi|328451275|gb|AEB12176.1| Ribosomal RNA small subunit methyltransferase H [Marinithermus
hydrothermalis DSM 14884]
Length = 281
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 129/334 (38%), Positives = 178/334 (53%), Gaps = 60/334 (17%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
SH+PV+ E L++ + R +VD TLG AGH+ I+ ++ IG D DP A+A+
Sbjct: 2 SHVPVLYHETLELLAVQRG-GLYVDATLGGAGHTRGILERGGQV---IGFDQDPEAIARV 57
Query: 175 RA-HLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
RA L+ L NFRH+++ L ++ + VD +L DLG+SS +
Sbjct: 58 RALRLDGLT-----------LVEGNFRHLEAHLNELGV----AEVDGVLADLGVSSYHFD 102
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
NPERGFS +GPLDMRM + A D++N++P E+ R+LR +GEE + +I +
Sbjct: 103 NPERGFSYRHEGPLDMRMSGEGPTAA-DVVNTYPVEELARILRTFGEEPRAWRIARRIAE 161
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
R + + +T +L ++++ G RG A + FQALRI VNDEL LE+ L A
Sbjct: 162 VREQQPIRTTTQLAEVVRQAV-GWRGAGH----PARKTFQALRIYVNDELGALEAFLEAA 216
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
L PGGRL VISFHSLEDRIVK+ FL +EDA
Sbjct: 217 ARVLKPGGRLAVISFHSLEDRIVKR-FL------KEDA---------------------- 247
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLR 447
++LTK+PITPS E N R RSAKLR
Sbjct: 248 -----RFQVLTKKPITPSDAERATNPRARSAKLR 276
>gi|297199072|ref|ZP_06916469.1| MraW methylase [Streptomyces sviceus ATCC 29083]
gi|197715975|gb|EDY60009.1| MraW methylase [Streptomyces sviceus ATCC 29083]
Length = 318
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 108/273 (39%), Positives = 154/273 (56%), Gaps = 22/273 (8%)
Query: 113 QSSHIPVMLGEVLDVFSSS--RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSA 170
QS H+PVML LD+ + + R + VDCTLG GHS A+++ PE +L I +D D A
Sbjct: 3 QSRHVPVMLQRCLDLLAPALERPGSVVVDCTLGLGGHSEALLQRFPEARL-IALDRDKEA 61
Query: 171 LAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG---VDAILMDLGM 227
L L G+ + F + + +V ++ + + R G V +L DLG+
Sbjct: 62 LR---------LSGE-----RLAPFGERATLVHAVYDELPDVLDRLGIARVQGVLFDLGV 107
Query: 228 SSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLL 287
SSMQ++ +RGF+ D PLDMRMD + A ++LN++P E+ R+LR YGEE +
Sbjct: 108 SSMQLDEADRGFAYAQDAPLDMRMDQTTGMSAAEVLNTYPAGELVRILRAYGEEKQAKRI 167
Query: 288 QNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLE 347
+ IV+ R + ++ LV+LI+ P R G A R FQALRI VN EL LE
Sbjct: 168 VSAIVRERDKEPFTNSARLVELIRDSLPQAAKRTGG--NPAKRTFQALRIEVNGELSVLE 225
Query: 348 SSLHACFDCLAPGGRLGVISFHSLEDRIVKQTF 380
++ A LA GGR+ V+S+HSLEDR+VKQ F
Sbjct: 226 RAIPAAVKALAVGGRIAVLSYHSLEDRLVKQVF 258
>gi|170016882|ref|YP_001727801.1| S-adenosyl-methyltransferase MraW [Leuconostoc citreum KM20]
gi|263456317|sp|B1MXV5.1|RSMH_LEUCK RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|169803739|gb|ACA82357.1| S-adenosyl-methyltransferase MraW [Leuconostoc citreum KM20]
Length = 313
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 126/345 (36%), Positives = 182/345 (52%), Gaps = 47/345 (13%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E + + + + T T +VD TLG GH+ I++ KL+ D D +A+
Sbjct: 6 HVTVLLHEAVALLAINPTGT-YVDATLGGGGHTGEILKQLTTGKLY-SFDQDDTAI---- 59
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
N + K +NFR +K L + +++ + VD I+ DLG+SS+Q ++
Sbjct: 60 -KYNQTRYADEIAAGKLILIHQNFRQLKVALAE--QHV--TAVDGIVYDLGVSSVQFDDG 114
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
+RGFS D LDMRMD + +L A+ I+N WP ++ RVL YGE+ + KI Q R
Sbjct: 115 QRGFSYNYDAELDMRMDQRQTLTAKTIVNDWPFNDILRVLSRYGEDRFPKQVARKIEQHR 174
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+G +++T ELVD+I+ P R+ G A R FQALR+AVNDEL LE SL +
Sbjct: 175 DKGPINTTFELVDIIKEAIPAPARRKGG--HPAKRTFQALRVAVNDELGALEDSLTQALE 232
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
LAP GR+ VI+F SLEDR+VKQ F RE +T + +
Sbjct: 233 LLAPSGRISVITFQSLEDRLVKQMF-------RE------------------KTSMPDLP 267
Query: 416 QGW---------NGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
G + K+LT++PI PS E N R SAKLR I++
Sbjct: 268 AGLPVLPGQFEPDYKLLTRKPILPSETEMTDNHRSESAKLRGIER 312
>gi|335029537|ref|ZP_08523044.1| S-adenosyl-methyltransferase MraW [Streptococcus infantis SK1076]
gi|334268834|gb|EGL87266.1| S-adenosyl-methyltransferase MraW [Streptococcus infantis SK1076]
Length = 316
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 124/342 (36%), Positives = 183/342 (53%), Gaps = 39/342 (11%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ VML E +D+ + +VD TLG AGHS ++ + D D +A+ A+
Sbjct: 7 HVTVMLHETIDMLDV-KPDGIYVDATLGGAGHSEYLLSKLSDKGHLYAFDQDQNAIDNAQ 65
Query: 176 AHLNSLLHGQAHPHLKTH--TFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
L P+++ TF K NFRH+K L N+ + +D I DLG+SS Q+
Sbjct: 66 KRLA--------PYIEKGMVTFIKDNFRHLKDCL----HNLGVTEIDGICYDLGVSSPQL 113
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ ERGFS D PLDMRM+ +ASL A +++N + E+ R+ +YGE+ + KI
Sbjct: 114 DQRERGFSYKKDAPLDMRMNQEASLTAYEVVNHYDYHELVRIFFKYGEDKFSKQIARKIE 173
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
QAR + + +T EL ++I+S P +++G A ++FQA+RI VNDEL + S+
Sbjct: 174 QAREQKPIETTTELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADESIQQ 231
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNINETW 410
D LA GR+ VI+FHSLEDR+ KQ F ++A E + L I DD
Sbjct: 232 AMDMLALDGRISVITFHSLEDRLTKQLF--------KEASTVEVPKGLPFIPDD------ 277
Query: 411 IRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++++++PI PS EE N R SAKLRV +KI
Sbjct: 278 -----LKPKMELVSRKPILPSKEELEANNRSHSAKLRVARKI 314
>gi|386317582|ref|YP_006013746.1| S-adenosyl-methyltransferase MraW [Streptococcus dysgalactiae
subsp. equisimilis ATCC 12394]
gi|410495517|ref|YP_006905363.1| S-adenosyl-methyltransferase MraW [Streptococcus dysgalactiae
subsp. equisimilis AC-2713]
gi|417753478|ref|ZP_12401597.1| S-adenosyl-methyltransferase MraW [Streptococcus dysgalactiae
subsp. equisimilis SK1249]
gi|417928351|ref|ZP_12571739.1| S-adenosyl-methyltransferase MraW [Streptococcus dysgalactiae
subsp. equisimilis SK1250]
gi|323127869|gb|ADX25166.1| S-adenosyl-methyltransferase MraW [Streptococcus dysgalactiae
subsp. equisimilis ATCC 12394]
gi|333769927|gb|EGL47007.1| S-adenosyl-methyltransferase MraW [Streptococcus dysgalactiae
subsp. equisimilis SK1249]
gi|340766225|gb|EGR88751.1| S-adenosyl-methyltransferase MraW [Streptococcus dysgalactiae
subsp. equisimilis SK1250]
gi|410440677|emb|CCI63305.1| S-adenosyl-methyltransferase MraW [Streptococcus dysgalactiae
subsp. equisimilis AC-2713]
Length = 337
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 120/346 (34%), Positives = 187/346 (54%), Gaps = 33/346 (9%)
Query: 109 IQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDP 168
+ ++ H+ V+L E +D+ +VD TLG +GHS+ ++ E D D
Sbjct: 21 VMTKEFHHVTVLLHETVDMLDIKPN-GIYVDATLGGSGHSAYLLSKLSEQGHLYCFDQDQ 79
Query: 169 SALAKARAHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLG 226
A+ A+ L + GQ TF K NFR++K+ L E + + +D IL DLG
Sbjct: 80 KAIDNAQLILKPYIDKGQV-------TFIKDNFRNLKARL----EALGVTKIDGILYDLG 128
Query: 227 MSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHL 286
+SS Q++ ERGFS D PLDMRMD QA L A D++N++P ++ ++ +YGE+
Sbjct: 129 VSSPQLDERERGFSYKQDAPLDMRMDRQAPLTAYDVVNTYPFNDLVKIFFKYGEDKFSKQ 188
Query: 287 LQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTL 346
+ KI QAR + +T EL +LI++ P +++G A ++FQA+RI VNDEL
Sbjct: 189 IARKIEQARAIKPIETTTELAELIKAAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAA 246
Query: 347 ESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNI 406
+ S+ + LA GR+ VI+FHSLEDR+ KQ F +E + + + +++
Sbjct: 247 DESIQDAMELLALDGRISVITFHSLEDRLTKQLF-------KEASTVDVPKGLPFIPEDM 299
Query: 407 NETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
T+ ++++++PI PS EE N R SAKLRV +KI
Sbjct: 300 KPTF----------ELVSRKPILPSQEELAANNRAHSAKLRVAKKI 335
>gi|373496304|ref|ZP_09586852.1| ribosomal RNA small subunit methyltransferase H [Fusobacterium sp.
12_1B]
gi|404368901|ref|ZP_10974248.1| ribosomal RNA small subunit methyltransferase H [Fusobacterium
ulcerans ATCC 49185]
gi|313688194|gb|EFS25029.1| ribosomal RNA small subunit methyltransferase H [Fusobacterium
ulcerans ATCC 49185]
gi|371966215|gb|EHO83707.1| ribosomal RNA small subunit methyltransferase H [Fusobacterium sp.
12_1B]
Length = 313
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 118/349 (33%), Positives = 178/349 (51%), Gaps = 40/349 (11%)
Query: 106 ESIIQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVD 165
E II + HIPV+ E +D ++ ++DCTLG GHS I++ E I +D
Sbjct: 2 EEIISEY---HIPVLYRESIDNLVINKD-GIYLDCTLGGGGHSEGILKELSEKGRLISID 57
Query: 166 VDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDL 225
D A+ A+ L +G K F NF ++ +V+ + +D ILMD+
Sbjct: 58 QDQQAIDFAKKRLEK--YGN-----KWQVFKNNFENLDTVIYMAGYD----KIDGILMDI 106
Query: 226 GMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWH 285
G+SS Q+++PERGFS D LDMRM+ L A +++N + + + ++L EYGEE N
Sbjct: 107 GVSSTQLDDPERGFSYRYDTKLDMRMNQNNPLSAYEVVNEYSEEALMKILFEYGEERNSR 166
Query: 286 LLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKT 345
+ I +AR + +TGELV +I+ P + A + FQA+RI VN EL+
Sbjct: 167 RIAKFICEAREIKKIETTGELVAIIKRAYPERAAKH-----PAKKTFQAIRIEVNRELEV 221
Query: 346 LESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDN 405
LE ++ D L GGRLG+I+FHSLEDR+VK F +++
Sbjct: 222 LEKAIDKAVDSLKVGGRLGIITFHSLEDRLVKTKF------------------KDLATAC 263
Query: 406 INETWIRQIIQGWNGKI--LTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ + G K+ +TK+PI P E N R S+KLRV+++I
Sbjct: 264 KCPPGLPICVCGGKAKVKLITKKPIIPEGNEVEFNNRAHSSKLRVVERI 312
>gi|296532828|ref|ZP_06895500.1| S-adenosyl-methyltransferase MraW [Roseomonas cervicalis ATCC
49957]
gi|296266841|gb|EFH12794.1| S-adenosyl-methyltransferase MraW [Roseomonas cervicalis ATCC
49957]
Length = 311
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 125/342 (36%), Positives = 178/342 (52%), Gaps = 38/342 (11%)
Query: 114 SSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAK 173
S H+PVML EVLD + R ++VD T G G++ AI+ LH D DP A+A+
Sbjct: 2 SGHLPVMLAEVLDNLAP-RAGGAYVDGTFGGGGYARAIL-GRAACTLH-AFDRDPDAIAR 58
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGV---DAILMDLGMSSM 230
+A L A I+ G++ E + GV D +++DLG+SS
Sbjct: 59 GQALLAE--------------SAGRLTLIERRFGEMREALAERGVTTVDGVVLDLGVSSF 104
Query: 231 QVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNK 290
Q++ ERGFS DGPLDMRM+ +A A D++N+ P+AE+ +L + GEE + +
Sbjct: 105 QLDQAERGFSFRFDGPLDMRME-KAGPSAADLVNTLPEAELADILWQLGEERHSRRIART 163
Query: 291 IVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSL 350
+V AR + +TG L LI +V P R I +ATR FQALR+ VNDEL +E L
Sbjct: 164 LVAARREAPIETTGRLRSLIHAVMP----RDPSGIDSATRSFQALRLKVNDELGEVERGL 219
Query: 351 HACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETW 410
A LAPGGRL V++FHSLEDRIVK+ + A G R + +
Sbjct: 220 EAAASLLAPGGRLVVVAFHSLEDRIVKRFM--------QQAAG-----RGPGASRHDPSA 266
Query: 411 IRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ Q +++ + P A E N R RSA+LR ++K+
Sbjct: 267 LLGGGQKPRFRLVANNALRPGAAELAANPRARSARLRTLEKL 308
>gi|258404866|ref|YP_003197608.1| S-adenosyl-methyltransferase MraW [Desulfohalobium retbaense DSM
5692]
gi|257797093|gb|ACV68030.1| S-adenosyl-methyltransferase MraW [Desulfohalobium retbaense DSM
5692]
Length = 332
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 135/338 (39%), Positives = 183/338 (54%), Gaps = 31/338 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L EVL R ++D TLG GH+ AI+ P+ ++ +G+D D +AL A
Sbjct: 18 HQSVLLAEVLQALKP-RPGGRYLDGTLGLGGHAEAILEHAPDSEV-LGLDRDGAALDAAE 75
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
A L+ + H +F S L Q+ VD L+DLG+SS+Q+++P
Sbjct: 76 ARLDRFGD-------RVHMAQISFSRFVSALDQLGWET----VDGALIDLGVSSLQLDSP 124
Query: 236 ERGFSVLGDGPLDMRMDPQASLK-AEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS L DGPLDMRMD + A+ +LN + R++R+YGEE + +IV
Sbjct: 125 ERGFSFLHDGPLDMRMDSGMGVPPAKSLLNKASQETLRRIIRDYGEEPMAGRIAKRIVMT 184
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + L +T +L +++ P R R Q AT+ FQALRIAVN EL+ LE+ L A
Sbjct: 185 REKTPLETTLQLAHVVEQAYPAKR-RAQSRNHPATKTFQALRIAVNKELEELEAFLEAIP 243
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
D L GGRL VISFHSLEDRIVK R +A G R ++ I R
Sbjct: 244 DRLCVGGRLAVISFHSLEDRIVKHRL-------RREARG----CRCPKEQPICVCGYRPR 292
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+Q +LTK+P+ PSAEE N R RSAKLRV ++I
Sbjct: 293 LQ-----VLTKKPLLPSAEEMEANSRSRSAKLRVAERI 325
>gi|304437331|ref|ZP_07397290.1| S-adenosyl-methyltransferase MraW [Selenomonas sp. oral taxon 149
str. 67H29BP]
gi|304369587|gb|EFM23253.1| S-adenosyl-methyltransferase MraW [Selenomonas sp. oral taxon 149
str. 67H29BP]
Length = 313
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 125/317 (39%), Positives = 162/317 (51%), Gaps = 32/317 (10%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
+VD TLG AGH+ I E IG+D D +A+A AR L A +
Sbjct: 26 YVDATLGGAGHAQRIAAQLSEQGRLIGIDQDETAIAAARERL-------ADVRCQVSLVR 78
Query: 197 KNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQAS 256
NFRH+ ++L E + S VD L DLG+SS Q++ PERGFS + D PLDMRMD +A
Sbjct: 79 DNFRHLTAILAA--EGV--SSVDGALFDLGVSSPQIDTPERGFSYMQDAPLDMRMDQRAR 134
Query: 257 LKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPG 316
A D++N++ + + YGEE + + I + R + +TG+LV +I P
Sbjct: 135 RSAYDVVNTYTAERLTEIFYTYGEERWAKRIASFIEKERQTHPITTTGDLVAVIDRAVPK 194
Query: 317 MRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIV 376
R G A RVFQALRI VNDEL LE +L A D L GGRL VI+FHSLEDRIV
Sbjct: 195 EVRARGG--HPAKRVFQALRIEVNDELGILEGALTAAVDALRIGGRLAVITFHSLEDRIV 252
Query: 377 KQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKI-LTKRPITPSAEEE 435
K T LR + I + G ++ L + SA E
Sbjct: 253 KNT------------------LRRLAQGCICPPHTPICVCGHTPEVRLIGKARAASAAEC 294
Query: 436 RLNCRCRSAKLRVIQKI 452
R+N R RSAKLRV +KI
Sbjct: 295 RVNTRARSAKLRVAEKI 311
>gi|317496841|ref|ZP_07955171.1| MraW methylase [Lachnospiraceae bacterium 5_1_63FAA]
gi|316895853|gb|EFV18005.1| MraW methylase [Lachnospiraceae bacterium 5_1_63FAA]
Length = 312
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 120/339 (35%), Positives = 178/339 (52%), Gaps = 30/339 (8%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
+ HI V+L E ++ + +VD TLG GH+ + + E +IG+D D A+A
Sbjct: 2 EFKHISVLLDETIEELHI-KPDGIYVDGTLGGGGHAYHVCQKLSEKGRYIGIDQDADAIA 60
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
+ L S K N+ ++ VL ++ VD IL+DLG+SS Q+
Sbjct: 61 ASTKRLESFKD-------KVTIVRDNYVNMPKVL----HDLGIEHVDGILLDLGVSSFQL 109
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
++ ERGF+ D PLDMRMD + SL A DI+N + + E+ ++R+YGEE + IV
Sbjct: 110 DDKERGFTYREDVPLDMRMDQRQSLTARDIVNEYSEMELFHIIRDYGEEKFAKNIAKHIV 169
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
R + +TG+L+++I+S P M+ R G A + FQA+RI N EL L+ S+ A
Sbjct: 170 NKRKESPIETTGQLIEVIKSAIP-MKVRAVGG-HPAKKTFQAIRIECNRELDVLKDSIDA 227
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
D L PGGRL +I+FHSLEDRIVK+ F E+ N+++
Sbjct: 228 MIDLLNPGGRLCIITFHSLEDRIVKRAF-----KKNENPCTCPPNFPVCVCGNVSK---- 278
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
GK LT++PI P EE N R +S+KLRV ++
Sbjct: 279 -------GKQLTRKPIIPGEEELEYNKRAKSSKLRVFER 310
>gi|406593308|ref|YP_006740487.1| S-adenosyl-methyltransferase MraW [Chlamydia psittaci NJ1]
gi|405789180|gb|AFS27922.1| S-adenosyl-methyltransferase MraW [Chlamydia psittaci NJ1]
Length = 298
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 121/338 (35%), Positives = 170/338 (50%), Gaps = 49/338 (14%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
SHIPV++ E L +F++ R F D T+GA GH+ A + +P + + D D +AL+ A
Sbjct: 6 SHIPVLVNECLSLFAN-RNPKFFCDVTVGAGGHAEAFLSEYPSIVSYDASDRDSAALSLA 64
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+ L + H FRH + + ++ D IL DLG+SSMQ++N
Sbjct: 65 KERLEKF-GDRVH-----------FRH--ASFEDLSKDSKEHVYDGILADLGVSSMQLDN 110
Query: 235 PERGFSVLGDG-PLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
RGFS GD LDMRMD + A ++LN+ + E+G++ REYGEE W + +V
Sbjct: 111 LSRGFSFQGDDHDLDMRMDVTKGITASEVLNTLREEELGKIFREYGEEPQWKNAASAVVH 170
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
R R + + +L D +V P R R++ I T +FQALR+ VN E L+ L +
Sbjct: 171 FRKRKKIITVRDLKDATATVFPSYRLRKK--IHPLTLIFQALRVYVNQEDLQLKVFLESA 228
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
LAPGGRL +ISF S EDR VK F R+
Sbjct: 229 MRWLAPGGRLIIISFCSSEDRPVKWFF-------------------------------RE 257
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ G ILTK+ + P+ EE R N RCRSAKLR +K
Sbjct: 258 AEKSGLGTILTKKVVMPTYEETRKNPRCRSAKLRCFEK 295
>gi|15924169|ref|NP_371703.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus Mu50]
gi|15926762|ref|NP_374295.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus N315]
gi|21282791|ref|NP_645879.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus MW2]
gi|49483342|ref|YP_040566.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus MRSA252]
gi|49486019|ref|YP_043240.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus MSSA476]
gi|148267671|ref|YP_001246614.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus JH9]
gi|150393729|ref|YP_001316404.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus JH1]
gi|156979500|ref|YP_001441759.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus Mu3]
gi|161509356|ref|YP_001575015.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|221140649|ref|ZP_03565142.1| S-adenosyl-methyltransferase [Staphylococcus aureus subsp. aureus
str. JKD6009]
gi|253314966|ref|ZP_04838179.1| S-adenosyl-methyltransferase [Staphylococcus aureus subsp. aureus
str. CF-Marseille]
gi|253733582|ref|ZP_04867747.1| S-adenosyl-methyltransferase [Staphylococcus aureus subsp. aureus
TCH130]
gi|255005966|ref|ZP_05144567.2| S-adenosyl-methyltransferase [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257425233|ref|ZP_05601658.1| methylase MraW [Staphylococcus aureus subsp. aureus 55/2053]
gi|257427893|ref|ZP_05604291.1| methylase MraW [Staphylococcus aureus subsp. aureus 65-1322]
gi|257430526|ref|ZP_05606908.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Staphylococcus aureus subsp. aureus 68-397]
gi|257433287|ref|ZP_05609645.1| S-adenosyl-methyltransferase mraW [Staphylococcus aureus subsp.
aureus E1410]
gi|257436129|ref|ZP_05612176.1| methylase MraW [Staphylococcus aureus subsp. aureus M876]
gi|257795765|ref|ZP_05644744.1| methylase MraW [Staphylococcus aureus A9781]
gi|258415989|ref|ZP_05682259.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus A9763]
gi|258419736|ref|ZP_05682703.1| methylase MraW [Staphylococcus aureus A9719]
gi|258444516|ref|ZP_05692845.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus A8115]
gi|258447651|ref|ZP_05695795.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Staphylococcus aureus A6300]
gi|258449493|ref|ZP_05697596.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus A6224]
gi|258451877|ref|ZP_05699898.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus A5948]
gi|258454872|ref|ZP_05702836.1| S-adenosyl-methyltransferase mraW [Staphylococcus aureus A5937]
gi|262048753|ref|ZP_06021635.1| hypothetical protein SAD30_1583 [Staphylococcus aureus D30]
gi|262051681|ref|ZP_06023900.1| hypothetical protein SA930_1508 [Staphylococcus aureus 930918-3]
gi|269202794|ref|YP_003282063.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus ED98]
gi|282892665|ref|ZP_06300900.1| methylase MraW [Staphylococcus aureus A8117]
gi|282903731|ref|ZP_06311619.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus C160]
gi|282905495|ref|ZP_06313350.1| methylase MraW [Staphylococcus aureus subsp. aureus Btn1260]
gi|282908470|ref|ZP_06316300.1| MraW methylase [Staphylococcus aureus subsp. aureus WW2703/97]
gi|282910752|ref|ZP_06318555.1| MraW methylase [Staphylococcus aureus subsp. aureus WBG10049]
gi|282913955|ref|ZP_06321742.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus M899]
gi|282916429|ref|ZP_06324191.1| methylase MraW [Staphylococcus aureus subsp. aureus D139]
gi|282918877|ref|ZP_06326612.1| methylase MraW [Staphylococcus aureus subsp. aureus C427]
gi|282919960|ref|ZP_06327689.1| methylase MraW [Staphylococcus aureus A9765]
gi|282924000|ref|ZP_06331676.1| methylase MraW [Staphylococcus aureus subsp. aureus C101]
gi|282929224|ref|ZP_06336799.1| methylase MraW [Staphylococcus aureus A10102]
gi|283770241|ref|ZP_06343133.1| S-adenosyl-methyltransferase [Staphylococcus aureus subsp. aureus
H19]
gi|283957922|ref|ZP_06375373.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus A017934/97]
gi|284024103|ref|ZP_06378501.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 132]
gi|293500988|ref|ZP_06666839.1| methylase MraW [Staphylococcus aureus subsp. aureus 58-424]
gi|293509946|ref|ZP_06668655.1| methylase MraW [Staphylococcus aureus subsp. aureus M809]
gi|293526535|ref|ZP_06671220.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus M1015]
gi|294848172|ref|ZP_06788919.1| methylase MraW [Staphylococcus aureus A9754]
gi|295407117|ref|ZP_06816918.1| methylase MraW [Staphylococcus aureus A8819]
gi|295427665|ref|ZP_06820297.1| methylase MraW [Staphylococcus aureus subsp. aureus EMRSA16]
gi|296276145|ref|ZP_06858652.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus MR1]
gi|297208179|ref|ZP_06924609.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|297245997|ref|ZP_06929856.1| methylase MraW [Staphylococcus aureus A8796]
gi|297591377|ref|ZP_06950015.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus MN8]
gi|300912257|ref|ZP_07129700.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus TCH70]
gi|304381261|ref|ZP_07363914.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|379014370|ref|YP_005290606.1| 16S rRNA m(4)C1402 methyltransferase [Staphylococcus aureus subsp.
aureus VC40]
gi|379020886|ref|YP_005297548.1| rRNA small subunit methyltransferase H [Staphylococcus aureus
subsp. aureus M013]
gi|384864406|ref|YP_005749765.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|384867939|ref|YP_005748135.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus TCH60]
gi|384869712|ref|YP_005752426.1| Ribosomal RNA small subunit methyltransferase H [Staphylococcus
aureus subsp. aureus T0131]
gi|385781406|ref|YP_005757577.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 11819-97]
gi|386728858|ref|YP_006195241.1| MraW [Staphylococcus aureus subsp. aureus 71193]
gi|386830716|ref|YP_006237370.1| MraW methylase family protein [Staphylococcus aureus subsp. aureus
HO 5096 0412]
gi|387142790|ref|YP_005731183.1| MraW methylase family protein [Staphylococcus aureus subsp. aureus
TW20]
gi|387150322|ref|YP_005741886.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus 04-02981]
gi|387602451|ref|YP_005733972.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus ST398]
gi|387780289|ref|YP_005755087.1| MraW methylase family protein [Staphylococcus aureus subsp. aureus
LGA251]
gi|404478517|ref|YP_006709947.1| MraW methylase family protein [Staphylococcus aureus 08BA02176]
gi|415688505|ref|ZP_11452195.1| S-adenosyl-methyltransferase [Staphylococcus aureus subsp. aureus
CGS01]
gi|415691026|ref|ZP_11453265.1| S-adenosyl-methyltransferase [Staphylococcus aureus subsp. aureus
CGS03]
gi|417650024|ref|ZP_12299804.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21189]
gi|417651218|ref|ZP_12300981.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21172]
gi|417796567|ref|ZP_12443775.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21305]
gi|417797853|ref|ZP_12445039.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21310]
gi|417800963|ref|ZP_12448065.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21318]
gi|417888327|ref|ZP_12532440.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21195]
gi|417893429|ref|ZP_12537458.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21201]
gi|417895601|ref|ZP_12539583.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21235]
gi|417898902|ref|ZP_12542815.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21259]
gi|417901852|ref|ZP_12545728.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21266]
gi|417904081|ref|ZP_12547911.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21269]
gi|418280882|ref|ZP_12893704.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21178]
gi|418286450|ref|ZP_12899096.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21209]
gi|418309822|ref|ZP_12921373.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21331]
gi|418312641|ref|ZP_12924150.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21334]
gi|418316132|ref|ZP_12927576.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21340]
gi|418318198|ref|ZP_12929608.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21232]
gi|418322027|ref|ZP_12933366.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus VCU006]
gi|418424317|ref|ZP_12997440.1| ribosomal RNA small subunit methyltransferase H [Staphylococcus
aureus subsp. aureus VRS1]
gi|418427314|ref|ZP_13000326.1| ribosomal RNA small subunit methyltransferase H [Staphylococcus
aureus subsp. aureus VRS2]
gi|418430155|ref|ZP_13003071.1| ribosomal RNA small subunit methyltransferase H [Staphylococcus
aureus subsp. aureus VRS3a]
gi|418433116|ref|ZP_13005896.1| ribosomal RNA small subunit methyltransferase H [Staphylococcus
aureus subsp. aureus VRS4]
gi|418436791|ref|ZP_13008593.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Staphylococcus aureus subsp. aureus VRS5]
gi|418439662|ref|ZP_13011370.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Staphylococcus aureus subsp. aureus VRS6]
gi|418442715|ref|ZP_13014317.1| ribosomal RNA small subunit methyltransferase H [Staphylococcus
aureus subsp. aureus VRS7]
gi|418445774|ref|ZP_13017250.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Staphylococcus aureus subsp. aureus VRS8]
gi|418448718|ref|ZP_13020110.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Staphylococcus aureus subsp. aureus VRS9]
gi|418451542|ref|ZP_13022876.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Staphylococcus aureus subsp. aureus VRS10]
gi|418454598|ref|ZP_13025860.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Staphylococcus aureus subsp. aureus VRS11a]
gi|418457474|ref|ZP_13028677.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Staphylococcus aureus subsp. aureus VRS11b]
gi|418561880|ref|ZP_13126355.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21262]
gi|418565167|ref|ZP_13129581.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21264]
gi|418569101|ref|ZP_13133441.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21272]
gi|418574690|ref|ZP_13138857.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21333]
gi|418579009|ref|ZP_13143104.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIG1114]
gi|418582012|ref|ZP_13146090.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIG1605]
gi|418595559|ref|ZP_13159166.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21342]
gi|418598367|ref|ZP_13161877.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21343]
gi|418638164|ref|ZP_13200467.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus IS-3]
gi|418642894|ref|ZP_13205080.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus IS-24]
gi|418643739|ref|ZP_13205897.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus IS-55]
gi|418647663|ref|ZP_13209726.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus IS-88]
gi|418649706|ref|ZP_13211734.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus IS-91]
gi|418654814|ref|ZP_13216710.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus IS-99]
gi|418655151|ref|ZP_13217028.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus IS-105]
gi|418659766|ref|ZP_13221424.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus IS-111]
gi|418663109|ref|ZP_13224634.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus IS-122]
gi|418873616|ref|ZP_13427911.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus IS-125]
gi|418875113|ref|ZP_13429373.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIGC93]
gi|418878029|ref|ZP_13432264.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIG1165]
gi|418880856|ref|ZP_13435075.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIG1213]
gi|418883785|ref|ZP_13437980.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIG1769]
gi|418886439|ref|ZP_13440587.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIG1150]
gi|418891811|ref|ZP_13445926.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIG1176]
gi|418894797|ref|ZP_13448894.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIG1057]
gi|418903387|ref|ZP_13457428.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIG1770]
gi|418911784|ref|ZP_13465767.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIG547]
gi|418914276|ref|ZP_13468248.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIGC340D]
gi|418916974|ref|ZP_13470933.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIG1267]
gi|418920257|ref|ZP_13474190.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIGC348]
gi|418922761|ref|ZP_13476678.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIG1233]
gi|418925411|ref|ZP_13479313.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIG2018]
gi|418928435|ref|ZP_13482321.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIG1612]
gi|418934078|ref|ZP_13487902.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIGC128]
gi|418947851|ref|ZP_13500191.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus IS-157]
gi|418951858|ref|ZP_13503925.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus IS-160]
gi|418955420|ref|ZP_13507360.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus IS-189]
gi|418978579|ref|ZP_13526379.1| 16S rRNA (cytosine(1402)-N(4))-methyltransferase [Staphylococcus
aureus subsp. aureus DR10]
gi|418982092|ref|ZP_13529800.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIG1242]
gi|418985759|ref|ZP_13533445.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIG1500]
gi|418991041|ref|ZP_13538702.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIG1096]
gi|419775288|ref|ZP_14301230.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CO-23]
gi|419785563|ref|ZP_14311315.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus IS-M]
gi|424785008|ref|ZP_18211811.1| rRNA small subunit methyltransferase H [Staphylococcus aureus CN79]
gi|440734624|ref|ZP_20914236.1| S-adenosyl-methyltransferase [Staphylococcus aureus subsp. aureus
DSM 20231]
gi|443637318|ref|ZP_21121400.1| 16S rRNA (cytosine(1402)-N(4))-methyltransferase [Staphylococcus
aureus subsp. aureus 21236]
gi|443640130|ref|ZP_21124127.1| 16S rRNA (cytosine(1402)-N(4))-methyltransferase [Staphylococcus
aureus subsp. aureus 21196]
gi|448740313|ref|ZP_21722293.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus KT/314250]
gi|448744982|ref|ZP_21726858.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus KT/Y21]
gi|42560201|sp|P60392.1|RSMH_STAAN RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|42560202|sp|P60393.1|RSMH_STAA8 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|42560203|sp|P60394.1|RSMH_STAAW RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|48474288|sp|P60485.1|RSMH_STAAM RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|54036187|sp|Q6GA33.1|RSMH_STAAS RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|54036188|sp|Q6GHQ6.1|RSMH_STAAR RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|262826623|sp|A7X1B8.1|RSMH_STAA1 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|262826627|sp|A6U0Z9.1|RSMH_STAA2 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|262826631|sp|A5IS65.1|RSMH_STAA9 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|262826654|sp|A8Z3M0.1|RSMH_STAAT RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|262831474|sp|Q2FHQ8.2|RSMH_STAA3 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|2149891|gb|AAC45622.1| unknown [Staphylococcus aureus]
gi|13700978|dbj|BAB42274.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
N315]
gi|14246949|dbj|BAB57341.1| S-adenosyl-methyltransferase mraW [Staphylococcus aureus subsp.
aureus Mu50]
gi|21204229|dbj|BAB94927.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MW2]
gi|49241471|emb|CAG40157.1| MraW methylase family protein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49244462|emb|CAG42890.1| MraW methylase family protein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|147740740|gb|ABQ49038.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus JH9]
gi|149946181|gb|ABR52117.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus JH1]
gi|156721635|dbj|BAF78052.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Mu3]
gi|160368165|gb|ABX29136.1| S-adenosyl-methyltransferase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253728452|gb|EES97181.1| S-adenosyl-methyltransferase [Staphylococcus aureus subsp. aureus
TCH130]
gi|257271690|gb|EEV03828.1| methylase MraW [Staphylococcus aureus subsp. aureus 55/2053]
gi|257274734|gb|EEV06221.1| methylase MraW [Staphylococcus aureus subsp. aureus 65-1322]
gi|257278654|gb|EEV09273.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Staphylococcus aureus subsp. aureus 68-397]
gi|257281380|gb|EEV11517.1| S-adenosyl-methyltransferase mraW [Staphylococcus aureus subsp.
aureus E1410]
gi|257284411|gb|EEV14531.1| methylase MraW [Staphylococcus aureus subsp. aureus M876]
gi|257789737|gb|EEV28077.1| methylase MraW [Staphylococcus aureus A9781]
gi|257839325|gb|EEV63799.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus A9763]
gi|257844321|gb|EEV68703.1| methylase MraW [Staphylococcus aureus A9719]
gi|257850009|gb|EEV73962.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus A8115]
gi|257853842|gb|EEV76801.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Staphylococcus aureus A6300]
gi|257857481|gb|EEV80379.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus A6224]
gi|257860485|gb|EEV83312.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus A5948]
gi|257863255|gb|EEV86019.1| S-adenosyl-methyltransferase mraW [Staphylococcus aureus A5937]
gi|259160416|gb|EEW45441.1| hypothetical protein SA930_1508 [Staphylococcus aureus 930918-3]
gi|259163209|gb|EEW47769.1| hypothetical protein SAD30_1583 [Staphylococcus aureus D30]
gi|262075084|gb|ACY11057.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus ED98]
gi|269940673|emb|CBI49052.1| MraW methylase family protein [Staphylococcus aureus subsp. aureus
TW20]
gi|282313972|gb|EFB44364.1| methylase MraW [Staphylococcus aureus subsp. aureus C101]
gi|282316687|gb|EFB47061.1| methylase MraW [Staphylococcus aureus subsp. aureus C427]
gi|282319869|gb|EFB50217.1| methylase MraW [Staphylococcus aureus subsp. aureus D139]
gi|282322023|gb|EFB52347.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus M899]
gi|282325357|gb|EFB55666.1| MraW methylase [Staphylococcus aureus subsp. aureus WBG10049]
gi|282327532|gb|EFB57815.1| MraW methylase [Staphylococcus aureus subsp. aureus WW2703/97]
gi|282330787|gb|EFB60301.1| methylase MraW [Staphylococcus aureus subsp. aureus Btn1260]
gi|282589183|gb|EFB94280.1| methylase MraW [Staphylococcus aureus A10102]
gi|282594676|gb|EFB99660.1| methylase MraW [Staphylococcus aureus A9765]
gi|282595349|gb|EFC00313.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus C160]
gi|282764662|gb|EFC04787.1| methylase MraW [Staphylococcus aureus A8117]
gi|283460388|gb|EFC07478.1| S-adenosyl-methyltransferase [Staphylococcus aureus subsp. aureus
H19]
gi|283470389|emb|CAQ49600.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus ST398]
gi|283790071|gb|EFC28888.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus A017934/97]
gi|285816861|gb|ADC37348.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus 04-02981]
gi|290920607|gb|EFD97670.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus M1015]
gi|291095993|gb|EFE26254.1| methylase MraW [Staphylococcus aureus subsp. aureus 58-424]
gi|291467396|gb|EFF09913.1| methylase MraW [Staphylococcus aureus subsp. aureus M809]
gi|294824972|gb|EFG41394.1| methylase MraW [Staphylococcus aureus A9754]
gi|294967970|gb|EFG43998.1| methylase MraW [Staphylococcus aureus A8819]
gi|295128023|gb|EFG57657.1| methylase MraW [Staphylococcus aureus subsp. aureus EMRSA16]
gi|296886918|gb|EFH25821.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|297177161|gb|EFH36415.1| methylase MraW [Staphylococcus aureus A8796]
gi|297576263|gb|EFH94979.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus MN8]
gi|300886503|gb|EFK81705.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus TCH70]
gi|304340244|gb|EFM06185.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|312438444|gb|ADQ77515.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus TCH60]
gi|312829573|emb|CBX34415.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus ECT-R 2]
gi|315130970|gb|EFT86954.1| S-adenosyl-methyltransferase [Staphylococcus aureus subsp. aureus
CGS03]
gi|315196909|gb|EFU27252.1| S-adenosyl-methyltransferase [Staphylococcus aureus subsp. aureus
CGS01]
gi|329313847|gb|AEB88260.1| Ribosomal RNA small subunit methyltransferase H [Staphylococcus
aureus subsp. aureus T0131]
gi|329725033|gb|EGG61529.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21189]
gi|329727402|gb|EGG63858.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21172]
gi|334268557|gb|EGL86991.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21305]
gi|334276975|gb|EGL95214.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21310]
gi|334277457|gb|EGL95687.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21318]
gi|341841498|gb|EGS82955.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21235]
gi|341845691|gb|EGS86893.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21266]
gi|341847185|gb|EGS88370.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21259]
gi|341847904|gb|EGS89073.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21269]
gi|341854814|gb|EGS95676.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21201]
gi|341855382|gb|EGS96228.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21195]
gi|344177391|emb|CCC87858.1| MraW methylase family protein [Staphylococcus aureus subsp. aureus
LGA251]
gi|359830195|gb|AEV78173.1| rRNA small subunit methyltransferase H [Staphylococcus aureus
subsp. aureus M013]
gi|364522395|gb|AEW65145.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 11819-97]
gi|365166983|gb|EHM58460.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21178]
gi|365167158|gb|EHM58634.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21209]
gi|365224642|gb|EHM65907.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus VCU006]
gi|365237945|gb|EHM78784.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21331]
gi|365238286|gb|EHM79123.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21334]
gi|365241803|gb|EHM82538.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21340]
gi|365243646|gb|EHM84317.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21232]
gi|371974648|gb|EHO91967.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21264]
gi|371975156|gb|EHO92456.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21262]
gi|371978286|gb|EHO95536.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21272]
gi|371978821|gb|EHO96062.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21333]
gi|374363067|gb|AEZ37172.1| 16S rRNA m(4)C1402 methyltransferase [Staphylococcus aureus subsp.
aureus VC40]
gi|374399724|gb|EHQ70860.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21343]
gi|374401139|gb|EHQ72226.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21342]
gi|375014639|gb|EHS08320.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus IS-99]
gi|375016007|gb|EHS09651.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus IS-24]
gi|375023388|gb|EHS16851.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus IS-3]
gi|375028037|gb|EHS21393.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus IS-55]
gi|375029373|gb|EHS22701.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus IS-88]
gi|375030079|gb|EHS23404.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus IS-91]
gi|375034326|gb|EHS27493.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus IS-111]
gi|375034742|gb|EHS27892.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus IS-122]
gi|375038000|gb|EHS31000.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus IS-105]
gi|375366153|gb|EHS70165.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus IS-125]
gi|375370903|gb|EHS74695.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus IS-189]
gi|375371030|gb|EHS74821.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus IS-160]
gi|375374148|gb|EHS77789.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus IS-157]
gi|377694151|gb|EHT18516.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIG1165]
gi|377695661|gb|EHT20021.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIG1057]
gi|377697036|gb|EHT21391.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIG1114]
gi|377704373|gb|EHT28682.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIG1242]
gi|377705577|gb|EHT29881.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIG1500]
gi|377710422|gb|EHT34660.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIG1605]
gi|377714872|gb|EHT39070.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIG1769]
gi|377723163|gb|EHT47288.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIG1096]
gi|377725162|gb|EHT49277.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIG547]
gi|377725392|gb|EHT49505.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIG1150]
gi|377731143|gb|EHT55200.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIG1176]
gi|377731749|gb|EHT55802.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIG1213]
gi|377736084|gb|EHT60114.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIG1233]
gi|377738347|gb|EHT62356.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIG1612]
gi|377742402|gb|EHT66387.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIG1770]
gi|377744480|gb|EHT68457.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIG2018]
gi|377750148|gb|EHT74086.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIG1267]
gi|377757778|gb|EHT81666.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIGC340D]
gi|377765616|gb|EHT89465.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIGC348]
gi|377770173|gb|EHT93935.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIGC93]
gi|377771858|gb|EHT95612.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIGC128]
gi|379993403|gb|EIA14849.1| 16S rRNA (cytosine(1402)-N(4))-methyltransferase [Staphylococcus
aureus subsp. aureus DR10]
gi|383362533|gb|EID39884.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus IS-M]
gi|383970972|gb|EID87062.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CO-23]
gi|384230151|gb|AFH69398.1| MraW [Staphylococcus aureus subsp. aureus 71193]
gi|385196108|emb|CCG15727.1| MraW methylase family protein [Staphylococcus aureus subsp. aureus
HO 5096 0412]
gi|387718550|gb|EIK06508.1| ribosomal RNA small subunit methyltransferase H [Staphylococcus
aureus subsp. aureus VRS3a]
gi|387718901|gb|EIK06857.1| ribosomal RNA small subunit methyltransferase H [Staphylococcus
aureus subsp. aureus VRS2]
gi|387720620|gb|EIK08527.1| ribosomal RNA small subunit methyltransferase H [Staphylococcus
aureus subsp. aureus VRS1]
gi|387725782|gb|EIK13380.1| ribosomal RNA small subunit methyltransferase H [Staphylococcus
aureus subsp. aureus VRS4]
gi|387727895|gb|EIK15395.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Staphylococcus aureus subsp. aureus VRS5]
gi|387730765|gb|EIK18123.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Staphylococcus aureus subsp. aureus VRS6]
gi|387735702|gb|EIK22812.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Staphylococcus aureus subsp. aureus VRS8]
gi|387737380|gb|EIK24446.1| ribosomal RNA small subunit methyltransferase H [Staphylococcus
aureus subsp. aureus VRS7]
gi|387737934|gb|EIK24988.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Staphylococcus aureus subsp. aureus VRS9]
gi|387744423|gb|EIK31187.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Staphylococcus aureus subsp. aureus VRS10]
gi|387745713|gb|EIK32463.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Staphylococcus aureus subsp. aureus VRS11a]
gi|387747206|gb|EIK33915.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Staphylococcus aureus subsp. aureus VRS11b]
gi|404440006|gb|AFR73199.1| MraW methylase family protein [Staphylococcus aureus 08BA02176]
gi|421956418|gb|EKU08747.1| rRNA small subunit methyltransferase H [Staphylococcus aureus CN79]
gi|436431652|gb|ELP29005.1| S-adenosyl-methyltransferase [Staphylococcus aureus subsp. aureus
DSM 20231]
gi|443405877|gb|ELS64468.1| 16S rRNA (cytosine(1402)-N(4))-methyltransferase [Staphylococcus
aureus subsp. aureus 21196]
gi|443405899|gb|ELS64489.1| 16S rRNA (cytosine(1402)-N(4))-methyltransferase [Staphylococcus
aureus subsp. aureus 21236]
gi|445548958|gb|ELY17204.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus KT/314250]
gi|445561691|gb|ELY17882.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus KT/Y21]
Length = 311
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 124/335 (37%), Positives = 174/335 (51%), Gaps = 30/335 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI VML E +D + ++DCTLG AGH+ ++ + I +D D +A+ A+
Sbjct: 4 HISVMLNETIDYLNVKEN-GVYIDCTLGGAGHALYLLNQLNDDGRLIAIDQDQTAIDNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L LH H NFR + +L D NI VD I DLG+SS Q++ P
Sbjct: 63 EVLKDHLHKVTFVH-------SNFRELTQILK--DLNI--EKVDGIYYDLGVSSPQLDIP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D LDMRMD L A +I+N+W + ++ YGEE + +I R
Sbjct: 112 ERGFSYHHDATLDMRMDQTQELTAYEIVNNWSYEALVKIFYRYGEEKFSKQIARRIEAHR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +T ELVD+I+ P + RR+G A RVFQALRIAVNDEL E S+ +
Sbjct: 172 EQQPITTTLELVDIIKEGIPA-KARRKGG-HPAKRVFQALRIAVNDELSAFEDSIEQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
+ GR+ VI+FHSLEDR+ KQ F ++ E E R + I E + ++
Sbjct: 230 LVKVDGRISVITFHSLEDRLCKQVF--------QEYEKGPEVPRGL--PVIPEAYTPKL- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
K + ++PIT + E+ N R RSAKLRV +
Sbjct: 279 -----KRVNRKPITATEEDLDDNNRARSAKLRVAE 308
>gi|326204085|ref|ZP_08193946.1| S-adenosyl-methyltransferase MraW [Clostridium papyrosolvens DSM
2782]
gi|325985852|gb|EGD46687.1| S-adenosyl-methyltransferase MraW [Clostridium papyrosolvens DSM
2782]
Length = 313
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 128/339 (37%), Positives = 178/339 (52%), Gaps = 32/339 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E ++ + ++ +VD T+G AGHSS I + E IG+D D A+ +
Sbjct: 5 HKSVLLDECIENLNINQD-GIYVDGTIGGAGHSSEIYKRLGEKGCLIGLDQDSFAVETSV 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L S + QA + F KN R S LG IDE VD IL+DLG+SS Q++
Sbjct: 64 KRL-SEIESQADFKVVNTNF-KNIRKACSELG-IDE------VDGILLDLGVSSHQLDEA 114
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
RGFS D PLDMRMD ++ L A D++N + + ++ R++R+YGEE + IV+AR
Sbjct: 115 SRGFSYQHDAPLDMRMDTKSDLSAYDVVNKYSEQDIYRIIRDYGEEKWSSRIAKFIVEAR 174
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +T ELVD+I+ P RR G A R FQA+RI VN+EL L ++ C D
Sbjct: 175 SNKPVETTYELVDIIKRAVPS-SARRDGP-HPAKRTFQAIRIEVNNELGILNKTIEDCVD 232
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L GRL +I+FHSLEDRIVK F +++ T +
Sbjct: 233 LLKGEGRLCIITFHSLEDRIVKLQFNKMVNP------------------CTCPTSFPVCV 274
Query: 416 QGWN--GKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
G K++ ++PI E N R RSAKLRV+QKI
Sbjct: 275 CGKKPRAKLVNRKPIVSGVSELEENPRARSAKLRVLQKI 313
>gi|148543819|ref|YP_001271189.1| S-adenosyl-methyltransferase MraW [Lactobacillus reuteri DSM 20016]
gi|184153222|ref|YP_001841563.1| hypothetical protein LAR_0567 [Lactobacillus reuteri JCM 1112]
gi|227364723|ref|ZP_03848772.1| S-adenosyl-methyltransferase [Lactobacillus reuteri MM2-3]
gi|325682650|ref|ZP_08162167.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Lactobacillus reuteri MM4-1A]
gi|263456253|sp|A5VJ28.1|RSMH_LACRD RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|263456260|sp|B2G6K1.1|RSMH_LACRJ RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|148530853|gb|ABQ82852.1| S-adenosyl-methyltransferase MraW [Lactobacillus reuteri DSM 20016]
gi|183224566|dbj|BAG25083.1| conserved hypothetical protein [Lactobacillus reuteri JCM 1112]
gi|227070182|gb|EEI08556.1| S-adenosyl-methyltransferase [Lactobacillus reuteri MM2-3]
gi|324978489|gb|EGC15439.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Lactobacillus reuteri MM4-1A]
Length = 318
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 125/339 (36%), Positives = 176/339 (51%), Gaps = 32/339 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E + + T T +VD TLG GH+ AI++ + L+ D D +A+ +
Sbjct: 6 HVTVLLKEAVAGLNVQPTGT-YVDATLGGGGHTQAILQQLVDGHLY-SFDQDQTAIDYNK 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
HL + + Q K NFR++K+ L + V+ IL DLG+SS Q ++
Sbjct: 64 EHLKTAIEQQ-----KLTLVEDNFRNLKAELNSYN----VKHVNGILYDLGVSSPQFDDA 114
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
+RGFS D PLDMRM+ + L A +++N WP + ++L YGEE + KI Q R
Sbjct: 115 KRGFSYQHDAPLDMRMNQEQKLSAMEVVNEWPYERLVKILYRYGEEKFAKSIARKIEQRR 174
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +T ELVD+I+ P RR G A + FQA+RIAVNDEL LE SL D
Sbjct: 175 KVAPIKTTFELVDVIKEGIPAA-ARRHGG-HPAKKSFQAIRIAVNDELGALEESLEQALD 232
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L GGR+ VI+F SLEDR+VK F + + +G + I
Sbjct: 233 LLDVGGRISVITFQSLEDRLVKTMFREKTSLSGDVPQG-----------------LPVIP 275
Query: 416 QGW--NGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
G N K++ K+PI S EE N R SAKLR+I+KI
Sbjct: 276 AGMEPNFKLINKKPIVASDEELAANHRAHSAKLRIIEKI 314
>gi|331002506|ref|ZP_08326024.1| ribosomal RNA small subunit methyltransferase H 2 [Lachnospiraceae
oral taxon 107 str. F0167]
gi|330410322|gb|EGG89756.1| ribosomal RNA small subunit methyltransferase H 2 [Lachnospiraceae
oral taxon 107 str. F0167]
Length = 311
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 121/339 (35%), Positives = 188/339 (55%), Gaps = 35/339 (10%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
+H V+L EV++ + + +VD TLG GH+ +++ KL IG+D D A+ A
Sbjct: 4 NHKSVLLDEVIESLNI-KADGYYVDGTLGGGGHALEVVKRLKTGKL-IGIDQDMDAINAA 61
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L + + ++ ++ N+ +I+++L + ENI + VD I +DLG+SS Q++N
Sbjct: 62 TQRL--IDYSKSVIIIRD-----NYVNIENILKK--ENIEK--VDGIYIDLGVSSYQLDN 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGF+ D PLDMRMD + LKA DI+N + ++E+ ++R+YGE+ + IV+
Sbjct: 111 AERGFTYRFDAPLDMRMDDRNELKASDIVNEYSESELFHIIRDYGEDRFAKNIAKHIVEY 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + + +T ELVD+I++ P M+ + G A R FQA+RI +N EL+ L S++
Sbjct: 171 RNKKRIETTFELVDIIKASIP-MKIQVTGG-HPAKRTFQAIRIELNKELEVLTDSINVMI 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
D L PGGRL VI+FHSLEDRIVKQ F + +
Sbjct: 229 DLLKPGGRLSVITFHSLEDRIVKQAF------------------KKAESPCVCPKKFPVC 270
Query: 415 IQG--WNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ G G+++T++ I P EE N R +SAKLRV +K
Sbjct: 271 VCGNKSKGRVITRKAILPGEEELEENSRAKSAKLRVFEK 309
>gi|293366856|ref|ZP_06613532.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Staphylococcus epidermidis M23864:W2(grey)]
gi|291319157|gb|EFE59527.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Staphylococcus epidermidis M23864:W2(grey)]
Length = 304
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 119/331 (35%), Positives = 176/331 (53%), Gaps = 30/331 (9%)
Query: 120 MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLN 179
ML E +D + + + +VDCTLG AGH+ ++ + I +D D +A+ A+ L
Sbjct: 1 MLNETID-YLNIKEDGVYVDCTLGGAGHALYLLNQLNDKGRLIAIDQDLTAIENAKEVLK 59
Query: 180 SLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGF 239
LH H NFR + ++L +++ VD I DLG+SS Q++ PERGF
Sbjct: 60 EHLHKVTFVH-------NNFRELTNILNELE----IEKVDGIYYDLGVSSPQLDVPERGF 108
Query: 240 SVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGG 299
S D LDMRMD SL A +++N W + R+ YGEE + +I R +
Sbjct: 109 SYHNDAKLDMRMDQTQSLSAYEVVNQWSYEALVRIFFRYGEEKFSKQIARRIEAHREQQP 168
Query: 300 LHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAP 359
+ +T ELVD+I+ P + RR+G A RVFQA+RIAVNDEL E S+ +C+
Sbjct: 169 IETTLELVDVIKEGIPA-KARRKGG-HPAKRVFQAIRIAVNDELSAFEDSVEQAIECVKV 226
Query: 360 GGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWN 419
GGR+ VI+FHSLEDR+ KQ F ++ E + R + I E + ++
Sbjct: 227 GGRISVITFHSLEDRLCKQIF--------QEFEKGPDVPRGL--PVIPEAYTPKL----- 271
Query: 420 GKILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
K + ++PIT + ++ N R RSAKLRV +
Sbjct: 272 -KRVNRKPITATDDDLNDNNRARSAKLRVAE 301
>gi|257458293|ref|ZP_05623442.1| S-adenosyl-methyltransferase MraW [Treponema vincentii ATCC 35580]
gi|257444320|gb|EEV19414.1| S-adenosyl-methyltransferase MraW [Treponema vincentii ATCC 35580]
Length = 315
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 126/345 (36%), Positives = 168/345 (48%), Gaps = 47/345 (13%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H PV+L E L + + +D TLG GHS A + P+LK+ IG+D DP+ AKA+
Sbjct: 5 HTPVLLQECLQLLAPETPDPLLIDGTLGEGGHSEAFLNRFPQLKV-IGIDADPAIQAKAK 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVD-----AILMDLGMSSM 230
L A ++ LG D+ + D IL DLG+S
Sbjct: 64 VRL-----------------APFGNRVRFFLGWSDDFFDQYPQDNPAPSLILFDLGISLF 106
Query: 231 QVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNK 290
+RGFS D PLDMR++P SL A DI+N++ + ++ VL Y EE +
Sbjct: 107 HYTESKRGFSFGADEPLDMRINPDESLTAADIVNTYSEKKLADVLYLYAEERFSRPIARA 166
Query: 291 IVQARLRGGLHSTGELVDLIQSVTPGMRGR-RQGWIKTATRVFQALRIAVNDELKTLESS 349
+V R + H E L ++V + R R G I AT+ FQALRIAVN EL L
Sbjct: 167 VVAEREK---HPFTEARQLSETVFHAVPARFRHGPIHPATKTFQALRIAVNSELDRLPRL 223
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINET 409
L F CLA GG++GVISFHSLEDRIVK F R++ I
Sbjct: 224 LEKAFACLAEGGKMGVISFHSLEDRIVKLFF------------------RDLAKSCICPP 265
Query: 410 WIRQIIQGW--NGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ G +LTK+P+ PSAEE N RSA+LRVI+K+
Sbjct: 266 EMPICTCGGMPRAALLTKKPVCPSAEETAANAPSRSARLRVIKKL 310
>gi|414160454|ref|ZP_11416722.1| ribosomal RNA small subunit methyltransferase H [Staphylococcus
simulans ACS-120-V-Sch1]
gi|410878352|gb|EKS26237.1| ribosomal RNA small subunit methyltransferase H [Staphylococcus
simulans ACS-120-V-Sch1]
Length = 311
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 123/336 (36%), Positives = 176/336 (52%), Gaps = 32/336 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ VML E +D + +VDCTLG AGH+ ++ + I +D D +A+ A+
Sbjct: 4 HVSVMLKETIDELNIKED-GVYVDCTLGGAGHALYLLNQLNDKGHLIAIDQDMTAIENAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFA-KNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L HL TF NFR I +L +D + VD I DLG+SS Q++
Sbjct: 63 EVLKD--------HLDRVTFVHSNFREINQILNDLDID----KVDGIYYDLGVSSPQLDV 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
PERGFS D LDMRMD L A +++N WP + R+ YGEE + +I +
Sbjct: 111 PERGFSYHQDARLDMRMDQTQPLSAYEVVNDWPYESLVRIFYRYGEEKFSKQIARRIEKT 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +T +LVD+I+ P + RR+G A R+FQA+RIAVNDELK E SL
Sbjct: 171 REHEPIETTLQLVDVIKEGIPA-KARRKGG-HPAKRLFQAIRIAVNDELKAFEDSLEQAI 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
+ + GR+ VI+FHSLEDR+ KQ F ++ E E R + I E + ++
Sbjct: 229 ERVKVHGRISVITFHSLEDRLCKQIF--------QEYEKGPEVPRGL--PIIPEEYTPKL 278
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
K + ++PIT + ++ N R RSAKLRV +
Sbjct: 279 ------KRVNRKPITATDDDLAENNRARSAKLRVAE 308
>gi|415683767|ref|ZP_11448969.1| S-adenosyl-methyltransferase [Staphylococcus aureus subsp. aureus
CGS00]
gi|315194065|gb|EFU24458.1| S-adenosyl-methyltransferase [Staphylococcus aureus subsp. aureus
CGS00]
Length = 311
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 124/335 (37%), Positives = 174/335 (51%), Gaps = 30/335 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI VML E +D + ++DCTLG AGH+ ++ + I +D D +A+ A+
Sbjct: 4 HISVMLNETIDYLNIKEN-GVYIDCTLGGAGHALYLLNQLNDDGRLIAIDQDQTAIDNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L LH H NFR + +L D NI VD I DLG+SS Q++ P
Sbjct: 63 EVLKDHLHKVTFVH-------SNFRELTQILK--DLNI--EKVDGIYYDLGVSSPQLDIP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D LDMRMD L A +I+N+W + ++ YGEE + +I R
Sbjct: 112 ERGFSYHHDATLDMRMDQTQELTAYEIVNNWSYEALVKIFYRYGEEKFSKQIARRIEAHR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +T ELVD+I+ P + RR+G A RVFQALRIAVNDEL E S+ +
Sbjct: 172 EQQPITTTLELVDIIKEGIPA-KARRKGG-HPAKRVFQALRIAVNDELSAFEDSIEQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
+ GR+ VI+FHSLEDR+ KQ F ++ E E R + I E + ++
Sbjct: 230 LVKVDGRISVITFHSLEDRLCKQVF--------QEYEKGPEVPRGL--PVIPEAYTPKL- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
K + ++PIT + E+ N R RSAKLRV +
Sbjct: 279 -----KRVNRKPITATEEDLDDNNRARSAKLRVAE 308
>gi|406930643|gb|EKD65982.1| S-adenosyl-methyltransferase MraW [uncultured bacterium (gcode 4)]
Length = 319
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 117/348 (33%), Positives = 183/348 (52%), Gaps = 37/348 (10%)
Query: 109 IQQQQSSHIPVMLGEVLDVFSSSRTITSFV-DCTLGAAGHSSAIIRAHPELKLHIGVDVD 167
+++ + HIPV+L E++D + + V DCTLG GH+S II + + +G D D
Sbjct: 1 MEKPKFWHIPVLLNELVDSIEIAWNRQNIVVDCTLGLGGHASKIIGKLNKWDIFVGFDAD 60
Query: 168 PSALAKARAHLN-SLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLG 226
L A +++ ++ ++K + NFR++K L +I V I DL
Sbjct: 61 EDNLNNASLNIDKNIWEYIKEKNIKIYFINSNFRNLKFELNKI----WIDKVTWIYYDLW 116
Query: 227 MSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHL 286
+SS+ ++ + FS G+G LDMR D ++ L A+DI+N++ + ++ RV REY EE
Sbjct: 117 VSSVHFDDENKWFSFRGEGTLDMRFDRKSWLTAKDIVNNYSENDLYRVFREYWEEKKSKF 176
Query: 287 LQNKIVQARLRGGLHSTGELVDLIQ--SVTPGMRGRRQGWIKTATRVFQALRIAVNDELK 344
+ + I++AR+ + +T +L+++I+ S P K+ RVFQALRI VNDE
Sbjct: 177 IIDNILKARIEKEIKTTKDLLEIIEGSSFDP----------KSKLRVFQALRIEVNDEFG 226
Query: 345 TLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDD 404
L+ SL L G + VISFHSLEDRIVKQTF I + E+ I
Sbjct: 227 ALKESLQDAVKLLDVGWIISVISFHSLEDRIVKQTFNEFI----------KTEINQITGM 276
Query: 405 NINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
N+ + + ++ K+P+ P E N R RS+KLRV++KI
Sbjct: 277 NMTQPILEKV---------YKKPLIPKQNELDSNPRSRSSKLRVLKKI 315
>gi|355566645|gb|EHH23024.1| Putative S-adenosyl-L-methionine-dependent methyltransferase
METT5D1 [Macaca mulatta]
Length = 407
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 131/374 (35%), Positives = 200/374 (53%), Gaps = 47/374 (12%)
Query: 100 NKDYDYESIIQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELK 159
++D D+E++ + HIPVM+ EV+ S + F+D T G+ GH+ AI++ ++
Sbjct: 60 SQDRDFETMAK----LHIPVMVDEVVHCLSPQKG-QIFLDMTFGSGGHTKAILQKESDIV 114
Query: 160 LHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDEN---ILRS 216
L +D DP+A A A HL+ L +P + I++VLGQ + + ++
Sbjct: 115 LW-ALDRDPTAYALAE-HLSEL-----YP-----------KQIRAVLGQFSQAEALLTKA 156
Query: 217 GV-----DAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMD----PQASLKAEDILNSWP 267
GV D +LMDLG SSMQ++ PERGFS+ DGPLDMRMD P A D++N+
Sbjct: 157 GVQPGTFDGVLMDLGCSSMQLDTPERGFSLRKDGPLDMRMDGGRYPDMP-TAADVVNALD 215
Query: 268 DAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTP--GMRGRR---Q 322
+ +LR YGEE + + + IVQAR + T +L ++ P + R+ Q
Sbjct: 216 QPALASILRTYGEEKHARKIASAIVQARSIYPITRTQQLASIVAGAFPPSAIYARKDLLQ 275
Query: 323 GWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLS 382
AT+ FQALRI VN+EL L + L L PGGRL +SFHSLEDRIVK+ L
Sbjct: 276 RSTHIATKTFQALRIFVNNELNELYTGLKTAQKFLRPGGRLVALSFHSLEDRIVKRFLLG 335
Query: 383 IIDHNREDAEGNEEELRNIR----DDNINETWIRQIIQGWNGKILTKRPITPSAEEERLN 438
I R + ++ ++ + +N E +R+ W +++ K+ ++P ++ + N
Sbjct: 336 ISMTERFNLSVRQQVMKTSQLGSGHENTEEVSMRRAPLMW--ELIHKKVLSPQDQDVQDN 393
Query: 439 CRCRSAKLRVIQKI 452
R RSAKLR K+
Sbjct: 394 PRGRSAKLRAAVKL 407
>gi|417642904|ref|ZP_12292982.1| S-adenosyl-methyltransferase MraW [Staphylococcus warneri VCU121]
gi|330686332|gb|EGG97937.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
VCU121]
Length = 311
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/335 (36%), Positives = 177/335 (52%), Gaps = 30/335 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI VML E +D + + + +VDCTLG AGH+ ++ + I +D D +A+ A+
Sbjct: 4 HISVMLNETID-YLNIKEDGVYVDCTLGGAGHALYLLNQLSDEGRLIAIDQDLTAIENAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L LH H NFR + +L ++ NI VD I DLG+SS Q++ P
Sbjct: 63 DVLKEHLHKVTFIH-------SNFRELTQILNEL--NI--EKVDGIYYDLGVSSPQLDVP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D LDMRMD SL A +++N WP + ++ YGEE + +I R
Sbjct: 112 ERGFSYHHDAKLDMRMDQTQSLSAYEVVNEWPYEALVKIFYRYGEEKFSKQIARRIEANR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +T ELV++I+ P + RR+G A RVFQA+RIAVNDEL E S+
Sbjct: 172 EKQPIETTLELVEVIKEGIPA-KARRKGG-HPAKRVFQAIRIAVNDELSAFEDSIEQAIG 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
+ GR+ VI+FHSLEDR+ KQ F ++ E + R + I E + ++
Sbjct: 230 LVKVNGRISVITFHSLEDRLCKQMF--------QEYEKGPDVPRGL--PVIPEAYTPKL- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
K + ++PIT + E+ N R RSAKLR+ +
Sbjct: 279 -----KRVNRKPITATDEDLDDNNRARSAKLRIAE 308
>gi|154485082|ref|ZP_02027530.1| hypothetical protein EUBVEN_02805 [Eubacterium ventriosum ATCC
27560]
gi|149734035|gb|EDM50154.1| S-adenosyl-methyltransferase MraW [Eubacterium ventriosum ATCC
27560]
Length = 311
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/336 (36%), Positives = 178/336 (52%), Gaps = 30/336 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D + + +VD TLG GHS I + + IG+D D AL AR
Sbjct: 5 HVSVLLNETIDGLNINPD-GIYVDGTLGGGGHSYEICKRLSDKGRLIGIDQDGEALEAAR 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L K N+ I ++L ++ VD I++DLG+SS Q++N
Sbjct: 64 ERLKEF-------EDKITLVRSNYCEIDTILKDLE----IEKVDGIVLDLGVSSYQLDNL 112
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD + + A D++N++ + E+ R++R+YGE+ + IV AR
Sbjct: 113 ERGFSYKSDAPLDMRMDQRQNKTAADVVNNYSENELFRIIRDYGEDKFAKNIAKHIVMAR 172
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
L +T EL ++I++ P M+ + +G A + FQA+RI VN EL L+ SL D
Sbjct: 173 KEKPLETTAELSEIIKASIP-MKFQAKGG-HPAKKTFQAIRIEVNQELTVLKESLDTMID 230
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L PGGR+ VI+FHSLEDRI K F RE NE D +
Sbjct: 231 HLNPGGRICVITFHSLEDRITKIKF-------RE----NENPCTCPPDFPVCVCG----- 274
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ GK++T++PI PS EE N R +S+KLR+ ++
Sbjct: 275 KVSKGKVITRKPIIPSEEEMTENKRSKSSKLRIFER 310
>gi|67459296|ref|YP_246920.1| S-adenosyl-methyltransferase MraW [Rickettsia felis URRWXCal2]
gi|75536274|sp|Q4UL18.1|RSMH_RICFE RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|67004829|gb|AAY61755.1| S-adenosyl-methyltransferase MraW [Rickettsia felis URRWXCal2]
Length = 306
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 126/341 (36%), Positives = 188/341 (55%), Gaps = 42/341 (12%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHI-GVDVDPSALAK 173
SHIPVML E+L + + ++DCT GA G+S AI+ + +I +D DP+ + K
Sbjct: 4 SHIPVMLNEMLANLAP-KDGEFYLDCTFGAGGYSKAILES---CDCYITALDRDPNVIKK 59
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
A + +G+ ++T+ FA +F +K D +++DLG+SSMQ++
Sbjct: 60 AEEIKQN--YGERFDFIETN-FADSFAKLKE-----------KKFDGVVLDLGVSSMQLD 105
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
+RGFS L DGPLDMRM Q L AE+ +N + E+ V+ +YG+ES + +IV+
Sbjct: 106 IADRGFSFLHDGPLDMRMSGQG-LSAEEFVNIAEEKELADVIYKYGDESFSRRIAKRIVE 164
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
R + STG+L +++S G R+G I AT+ FQA+RI +N+EL LE L
Sbjct: 165 YRKTTRIDSTGKLAQIVRSSI----GFRKGKIDPATKTFQAIRIYINNELGELERFLANV 220
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDD-NIN-ETWI 411
+ L GRL V+SFHSLEDRIVK F +E++E + +DD I+ + W+
Sbjct: 221 KNILKKDGRLVVVSFHSLEDRIVKNFF-------KENSEKPVARSKYAKDDIAIDPDKWL 273
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
KI+T + + S +E LN R RSAKLR +KI
Sbjct: 274 ---------KIITNKALATSDKEVGLNIRARSAKLRAAKKI 305
>gi|222153542|ref|YP_002562719.1| S-adenosyl-methyltransferase MraW [Streptococcus uberis 0140J]
gi|262825652|sp|B9DV78.1|RSMH_STRU0 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|222114355|emb|CAR43080.1| S-adenosyl-methyltransferase MraW [Streptococcus uberis 0140J]
Length = 316
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 124/341 (36%), Positives = 180/341 (52%), Gaps = 37/341 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+L E +D+ + +VD TLG AGHSS ++ + D D A+ A+
Sbjct: 7 HITVLLHETVDMLDI-KPDGIYVDATLGGAGHSSYLLSKLNDNGHLYCFDQDQKAIDNAQ 65
Query: 176 AHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
L S + G TF K NFRH+KS L + + +D IL DLG+SS Q++
Sbjct: 66 VFLKSYVDRGMV-------TFIKANFRHLKSELNALG----VTEIDGILYDLGVSSPQLD 114
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
ERGFS D PLDMRMD A+L A ++N +P ++ R+ +YGE+ + KI Q
Sbjct: 115 ERERGFSYKQDAPLDMRMDSDAALTAYHVVNDYPFQDLVRIFFKYGEDKFSKQIARKIEQ 174
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +T EL ++I+S P +++G A ++FQA+RI VNDEL + S+
Sbjct: 175 ARAIKPIETTAELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADESIQEA 232
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTF--LSIIDHNREDAEGNEEELRNIRDDNINETWI 411
LA GR+ VI+FHSLEDR+ KQ F S +D + +I
Sbjct: 233 MTMLALNGRISVITFHSLEDRLTKQLFKEASTVDVPK------------------GIPFI 274
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ +Q +++T++PI PS EE N R SAKLRV +K+
Sbjct: 275 PEDMQP-KFELVTRKPILPSQEELLANNRAHSAKLRVARKV 314
>gi|418282840|ref|ZP_12895597.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21202]
gi|365168437|gb|EHM59775.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21202]
Length = 311
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 124/335 (37%), Positives = 174/335 (51%), Gaps = 30/335 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI VML E +D + ++DCTLG AGH+ ++ + I +D D +A+ A+
Sbjct: 4 HISVMLNETIDYLNVKEN-GVYIDCTLGGAGHALYLLNQLNDDGRLIAIDQDQTAIDNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L LH H NFR + +L D NI VD I DLG+SS Q++ P
Sbjct: 63 EVLKDHLHKVTFVH-------SNFRELTQILK--DLNI--EKVDGIYYDLGVSSPQLDIP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D LDMRMD L A +I+N+W + ++ YGEE + +I R
Sbjct: 112 ERGFSYHHDATLDMRMDQTQELTAYEIVNNWSYEALVKIFYRYGEEKFSKQIARRIEVHR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +T ELVD+I+ P + RR+G A RVFQALRIAVNDEL E S+ +
Sbjct: 172 EQQPITTTLELVDIIKEGIPA-KARRKGG-HPAKRVFQALRIAVNDELSAFEDSIEQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
+ GR+ VI+FHSLEDR+ KQ F ++ E E R + I E + ++
Sbjct: 230 LVKVDGRISVITFHSLEDRLCKQVF--------QEYEKGPEVPRGL--PVIPEAYTPKL- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
K + ++PIT + E+ N R RSAKLRV +
Sbjct: 279 -----KRVNRKPITATEEDLDDNNRARSAKLRVAE 308
>gi|336426140|ref|ZP_08606153.1| ribosomal RNA small subunit methyltransferase H 2 [Lachnospiraceae
bacterium 3_1_57FAA_CT1]
gi|336011098|gb|EGN41066.1| ribosomal RNA small subunit methyltransferase H 2 [Lachnospiraceae
bacterium 3_1_57FAA_CT1]
Length = 312
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 119/315 (37%), Positives = 167/315 (53%), Gaps = 30/315 (9%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
++D TLG GHSS I R + L IG+D D ALA A L K
Sbjct: 25 YLDGTLGGGGHSSEICRRLADGHL-IGIDQDEEALAAASERLKPF-------QDKITLVR 76
Query: 197 KNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQAS 256
N+ + V+ +N+ +GVD I++DLG+SS Q++N ERGFS D LDMRMD + S
Sbjct: 77 DNYCNAPEVI----KNLGITGVDGIVLDLGVSSYQLDNVERGFSYRYDTALDMRMDTRQS 132
Query: 257 LKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPG 316
L A +I+N +P+ E+ R++R+YGE+ + I AR + +TGEL +LI++ P
Sbjct: 133 LTAREIINEYPERELYRIIRDYGEDQFAKNIAKHIAAARKEKPIETTGELNELIKAAIPA 192
Query: 317 MRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIV 376
R R G + R FQA+RI N EL L++SL L PGGR+ +I+FHSLEDRIV
Sbjct: 193 -RMRANGG-HPSKRTFQAIRIECNHELDVLKNSLDELIAMLNPGGRICIITFHSLEDRIV 250
Query: 377 KQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEER 436
K F NE D + + GK++T++P+ P EE
Sbjct: 251 KSAF-----------RKNENPCTCPPDFPVCVCGKKS-----QGKVITRKPVLPGEEELE 294
Query: 437 LNCRCRSAKLRVIQK 451
N R +SAKLR+ +K
Sbjct: 295 TNSRSKSAKLRIFEK 309
>gi|228477291|ref|ZP_04061929.1| S-adenosyl-methyltransferase MraW [Streptococcus salivarius SK126]
gi|228251310|gb|EEK10481.1| S-adenosyl-methyltransferase MraW [Streptococcus salivarius SK126]
Length = 316
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 124/341 (36%), Positives = 181/341 (53%), Gaps = 37/341 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG AGHSS ++ E D D A+ A+
Sbjct: 7 HVTVLLHETVDMLDI-KPDGIYVDATLGGAGHSSYLLSQLSEKGHLYCFDQDQKAIDNAQ 65
Query: 176 AHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
L + G TF K NFR++KS L E + S +D IL DLG+SS Q++
Sbjct: 66 VRLKDYIDKGMV-------TFIKDNFRNLKSNL----EALGVSEIDGILYDLGVSSPQLD 114
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
+RGFS D LDMRM+ +ASL A D++N++P ++ R+ +YGE+ + KI Q
Sbjct: 115 ERDRGFSYKQDAKLDMRMNEEASLTAYDVVNTYPYNDLVRIFFKYGEDKFSKQIARKIEQ 174
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +T EL ++I+S P +++G A ++FQA+RI VNDEL + S+
Sbjct: 175 ARQVKPIETTTELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADESIQEA 232
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTF--LSIIDHNREDAEGNEEELRNIRDDNINETWI 411
D LA GR+ VI+FHSLEDR+ KQ F S +D + +I
Sbjct: 233 LDLLAVDGRISVITFHSLEDRLTKQLFKEASTVDVPK------------------GLPFI 274
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ +Q ++ ++PI PS EE N R SAKLRV +KI
Sbjct: 275 PEELQPKVA-LVNRKPILPSQEELEANNRSHSAKLRVAKKI 314
>gi|227874385|ref|ZP_03992569.1| S-adenosylmethionine-dependent methyltransferase involved in cell
envelope biogenesis [Oribacterium sinus F0268]
gi|227839793|gb|EEJ50239.1| S-adenosylmethionine-dependent methyltransferase involved in cell
envelope biogenesis [Oribacterium sinus F0268]
Length = 311
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/340 (35%), Positives = 178/340 (52%), Gaps = 36/340 (10%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
SH +M+ E ++ + + +VD TLG GHS I+ E IG+D D A+ A
Sbjct: 4 SHKSIMVEECMEGLNIKKD-GIYVDGTLGGGGHSFHILERLGEKGQLIGIDQDEDAILAA 62
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L + H N+ H +L + VD IL+DLG+SS Q +
Sbjct: 63 TERLKPFAK-------QLHIIRDNYEHFPEILSSLS----IEKVDGILLDLGVSSHQFDE 111
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS D PLDMRMD + A+D++NS+ ++ + ++R+YGE+ + IV A
Sbjct: 112 EERGFSYRFDAPLDMRMDQRQDFSAKDLVNSYSESSLFHIIRDYGEDKFAKNIAKHIVLA 171
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +T EL ++I P M+ R QG A R FQA+RIA+N EL+ LE+SL +
Sbjct: 172 RQEKPIETTKELAEIISHAIP-MKFRLQGG-HPAKRTFQAIRIALNRELEVLENSLKSMI 229
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRN---IRDDNINETWI 411
+ L PGGR+ +ISFHSLEDRIVK++F +E N D T
Sbjct: 230 EALNPGGRICIISFHSLEDRIVKRSF---------------KEAENPCICPPDFPVCTCG 274
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
R+ + GK+++++ I PS EE N R +SAKLR+ ++
Sbjct: 275 RKSL----GKVISRKAICPSEEEMEENPRAKSAKLRIFER 310
>gi|78188031|ref|YP_378369.1| methyltransferase [Chlorobium chlorochromatii CaD3]
gi|88909192|sp|Q3ANW1.1|RSMH_CHLCH RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|78170230|gb|ABB27326.1| methyltransferase [Chlorobium chlorochromatii CaD3]
Length = 328
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 131/345 (37%), Positives = 179/345 (51%), Gaps = 35/345 (10%)
Query: 114 SSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHP-----ELKLHIGVDVDP 168
+ H PV+ EV+ I +VD TLG HS A+++A E L IG+D D
Sbjct: 6 TYHDPVLAAEVVATLVQRSGI--YVDGTLGGGSHSLALLQALQAQGLLESSLLIGIDQDS 63
Query: 169 SALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQI-DENILRSGVDAILMDLGM 227
ALA A L + P+ T NFR + S++ Q+ D V +L+DLG+
Sbjct: 64 DALAMAAERLQAW-----QPY--TRLLKGNFRDMASLVQQLCDAEGRACAVTGVLLDLGV 116
Query: 228 SSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLL 287
SS Q++ ERGFS + GPLDMRMD A L A +++N +AE+ R+ YGEE L
Sbjct: 117 SSFQLDTAERGFSYMRSGPLDMRMDNTAPLTAAELINHADEAELARIFYHYGEEPRSRAL 176
Query: 288 QNKIVQARLR-GGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTL 346
+VQ R + G +T EL L++ +T G + IKT +R+FQALRIAVNDEL L
Sbjct: 177 ARAVVQQREKMGNFTTTEELAALVRRLT---HGGEKAVIKTLSRLFQALRIAVNDELGAL 233
Query: 347 ESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNI 406
L + L GRL V+S+HSLEDR+VK F H+ + G +
Sbjct: 234 HEVLEGALELLDGNGRLAVMSYHSLEDRVVKHFF----THHAQCDWGPK----------- 278
Query: 407 NETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+R+ + I+TKRP+ SA+E N R RSAKLRV K
Sbjct: 279 -GVALREPLSQGALTIVTKRPMLASADEIERNPRARSAKLRVAAK 322
>gi|297571245|ref|YP_003697019.1| S-adenosyl-methyltransferase MraW [Arcanobacterium haemolyticum DSM
20595]
gi|296931592|gb|ADH92400.1| S-adenosyl-methyltransferase MraW [Arcanobacterium haemolyticum DSM
20595]
Length = 336
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/270 (39%), Positives = 148/270 (54%), Gaps = 22/270 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITS-FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
H+PV+L ++D+ + S +DCTLG GHS A +R P L++ IG+D D A+ A
Sbjct: 11 HVPVLLQPIIDMLGPALEGDSVLIDCTLGMGGHSEAFLRTFPSLRV-IGIDRDEQAIELA 69
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG----VDAILMDLGMSSM 230
A L F F+ + + +D G VDAILMDLG+SS+
Sbjct: 70 SARLAP--------------FGDRFQAVHTTYDDVDRVAFTYGKSGCVDAILMDLGVSSL 115
Query: 231 QVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNK 290
Q++ +RGFS D PLDMRMD + A ++LNS+ E+ R+LR YGEE +
Sbjct: 116 QLDEVDRGFSYSQDAPLDMRMDTSKGMTAGELLNSYSHGEIARILRVYGEEKFASQIARA 175
Query: 291 IVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSL 350
IV+ R L T EL DL++ P RR+G + R FQALR+AVN+EL LE+++
Sbjct: 176 IVKRREDHPLERTRELADLVRDTIPAP-ARRKGG-NPSKRTFQALRVAVNNELDVLEAAV 233
Query: 351 HACFDCLAPGGRLGVISFHSLEDRIVKQTF 380
+ L GGR+ V S+ SLEDRIVK F
Sbjct: 234 PRALEALRVGGRIAVESYQSLEDRIVKDAF 263
>gi|163816702|ref|ZP_02208065.1| hypothetical protein COPEUT_02892 [Coprococcus eutactus ATCC 27759]
gi|158447959|gb|EDP24954.1| S-adenosyl-methyltransferase MraW [Coprococcus eutactus ATCC 27759]
Length = 311
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/339 (35%), Positives = 180/339 (53%), Gaps = 32/339 (9%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
+H V+L E +D + + +VD TLG AGHS I+R E IG+D D A+A A
Sbjct: 4 AHKSVLLEETIDNLNI-KPDGIYVDGTLGGAGHSEQIVRRLGEGGKLIGIDQDEDAIAAA 62
Query: 175 RAHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
L P+ T + N+++ + +L ++ NI + VD IL+DLG+SS Q++
Sbjct: 63 TKRL--------EPYKDKVTIVRDNYQNFRRILDEL--NIQK--VDGILLDLGVSSYQLD 110
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
N +RGF+ D PLDMRMD + S A+DI+N +P+AE+ R+LR+YGEE + I +
Sbjct: 111 NADRGFTYRVDAPLDMRMDNRQSKTAKDIVNEYPEAELFRILRDYGEERYAKSIAYHICK 170
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
R + +T EL D+I+ P R G + + FQA+RI +N EL L S+
Sbjct: 171 YRQDKEIDTTEELNDIIRGSIPAK--ARNGQGHPSKQTFQAIRIELNRELDVLRDSIDGM 228
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
L PGGRL +I+FHSLEDRIVK F + E I N +
Sbjct: 229 IASLNPGGRLCIITFHSLEDRIVKTAF-------------RKNENPCICPPNF---PVCT 272
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ G+++T++PI P E N R +S+KLRV + +
Sbjct: 273 CGRKSRGRVITRKPIIPGERELIENSRSKSSKLRVFEAV 311
>gi|383484188|ref|YP_005393101.1| 16S rRNA m(4)C1402 methyltransferase [Rickettsia parkeri str.
Portsmouth]
gi|378936542|gb|AFC75042.1| 16S rRNA m(4)C1402 methyltransferase [Rickettsia parkeri str.
Portsmouth]
Length = 307
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 123/341 (36%), Positives = 186/341 (54%), Gaps = 42/341 (12%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHI-GVDVDPSALAK 173
SH+ VML E+L+ S + S++DCT GA G+S I+ + ++ +D DP+ + +
Sbjct: 4 SHVSVMLNEMLEALSP-KAGESYLDCTFGAGGYSKVILES---CNCYVTALDRDPNVIKR 59
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
A + +G+ ++T+ FA +F +K D I++DLG+SSMQ++
Sbjct: 60 AEEIQQN--YGERFDFVETN-FADSFAKLKE-----------KKFDGIVLDLGVSSMQLD 105
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
+RGFS L DGPLDMRM Q L AE+ +N+ + E+ V+ +YG+ES + +IV+
Sbjct: 106 IADRGFSFLHDGPLDMRMSGQG-LSAEEFVNAAEEKELADVIYKYGDESFSRRIAKRIVE 164
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
R + ST +L ++++S G R+G I AT+ FQA+RI VNDEL LE L
Sbjct: 165 YRKTARIDSTSKLAEIVRSSI----GFRKGKIDPATKTFQAIRIYVNDELGELEQFLVNV 220
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE--TWI 411
+ L GRL V+SFHSLEDRIVK F +E++E + + D + W+
Sbjct: 221 KNILKKDGRLVVVSFHSLEDRIVKNFF-------KENSEKPVVRSKYAKGDMTIDPNKWL 273
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
KI+T + + PS +E LN R RSAKLR + I
Sbjct: 274 ---------KIITNKALAPSDKEVGLNIRARSAKLRAAKAI 305
>gi|258423777|ref|ZP_05686663.1| methylase MraW [Staphylococcus aureus A9635]
gi|417891894|ref|ZP_12535951.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21200]
gi|418307407|ref|ZP_12919120.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21194]
gi|418559297|ref|ZP_13123843.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21252]
gi|418888969|ref|ZP_13443105.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIG1524]
gi|257846009|gb|EEV70037.1| methylase MraW [Staphylococcus aureus A9635]
gi|341851180|gb|EGS92109.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21200]
gi|365245674|gb|EHM86290.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21194]
gi|371975588|gb|EHO92882.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21252]
gi|377754479|gb|EHT78388.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIG1524]
Length = 311
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 124/335 (37%), Positives = 174/335 (51%), Gaps = 30/335 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI VML E +D + ++DCTLG AGH+ ++ + I +D D +A+ A+
Sbjct: 4 HISVMLNETIDYLNVKEN-GVYIDCTLGGAGHALYLLNQLNDDGRLIAIDQDQTAIDNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L LH H NFR + +L D NI VD I DLG+SS Q++ P
Sbjct: 63 EVLKDHLHKVTFVH-------SNFRELTQILK--DLNI--EKVDGIYYDLGVSSPQLDIP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D LDMRMD L A +I+N+W + ++ YGEE + +I R
Sbjct: 112 ERGFSYHHDATLDMRMDQTQELTAYEIVNNWSYEALVKIFYRYGEEKFSKQIARRIEAHR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +T ELVD+I+ P + RR+G A RVFQALRIAVNDEL E S+ +
Sbjct: 172 EQQPITTTLELVDIIKEGIPA-KARRKGG-HPAKRVFQALRIAVNDELSAFEDSIEQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
+ GR+ VI+FHSLEDR+ KQ F ++ E E R + I E + ++
Sbjct: 230 LVKVEGRISVITFHSLEDRLCKQVF--------QEYEKGPEVPRGL--PVIPEAYTPKL- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
K + ++PIT + E+ N R RSAKLRV +
Sbjct: 279 -----KRVNRKPITATEEDLDDNNRARSAKLRVAE 308
>gi|421074503|ref|ZP_15535534.1| Ribosomal RNA small subunit methyltransferase H [Pelosinus
fermentans JBW45]
gi|392527374|gb|EIW50469.1| Ribosomal RNA small subunit methyltransferase H [Pelosinus
fermentans JBW45]
Length = 312
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 127/341 (37%), Positives = 181/341 (53%), Gaps = 39/341 (11%)
Query: 116 HIPVMLGEVLDVFSSSRTITS----FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
H+ V+L E S S +T+ +VDCTLG +GH+ +++ IG+D DP+A+
Sbjct: 5 HVSVLLKE-----SVSALVTNPEGIYVDCTLGGSGHAEHVVKQLGASGRFIGIDQDPAAI 59
Query: 172 AKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQ 231
+ L ++ K NF++I VL ++ N VD IL DLG+SS Q
Sbjct: 60 KTGKVKL-------SNAKCKVDIVQNNFQNIGLVLDELKVN----KVDGILFDLGVSSHQ 108
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ ERGFS + D PLDMRM+P + A DI+N++ + ++ ++ YGEE + I
Sbjct: 109 LDIAERGFSYMQDAPLDMRMNPNSDFSAYDIVNNYSENQLADIIITYGEERWAKRIAKFI 168
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
++ R + +TGELVD+I+ P RR G A R FQA+RI VN+EL L+ +
Sbjct: 169 IEFRSGKAIETTGELVDIIKRAIPSA-ARRDGP-HPAKRTFQAIRIEVNNELGILKDAFT 226
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
+ LA GGRL +I+FHSLEDRI KQT L ++ + + N N+ I
Sbjct: 227 TSIERLALGGRLCIITFHSLEDRIAKQT-LQLMAKGCICPKALPICMCN------NKPQI 279
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
KIL K PI PS E N R RSAKLRV +KI
Sbjct: 280 ---------KILGK-PIAPSVNELEENPRARSAKLRVAEKI 310
>gi|157828717|ref|YP_001494959.1| S-adenosyl-methyltransferase MraW [Rickettsia rickettsii str.
'Sheila Smith']
gi|157801198|gb|ABV76451.1| S-adenosyl-methyltransferase MraW [Rickettsia rickettsii str.
'Sheila Smith']
Length = 299
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 123/336 (36%), Positives = 185/336 (55%), Gaps = 42/336 (12%)
Query: 120 MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHI-GVDVDPSALAKARAHL 178
ML E+L+ S + S++DCT GA G+S AI+ + ++ +D DP+ + +A
Sbjct: 1 MLNEMLEALSP-KAGESYLDCTFGAGGYSKAILES---CNCYVTALDRDPNVIKRAEEIQ 56
Query: 179 NSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERG 238
+ +G+ ++T+ FA +F +K D I++DLG+SSMQ++ +RG
Sbjct: 57 QN--YGERFDFVETN-FADSFAKLKE-----------KKFDGIVLDLGVSSMQLDIADRG 102
Query: 239 FSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRG 298
FS L DGPLDMRM Q L AE+ +N+ + E+ V+ +YG+ES + +IV+ R
Sbjct: 103 FSFLHDGPLDMRMSGQG-LSAEEFVNAAEEKELADVIYKYGDESFSRRIAKRIVEYRKTA 161
Query: 299 GLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLA 358
+ STG+L ++++S G R+G I AT+ FQA+RI VNDEL LE L + L
Sbjct: 162 RIDSTGKLAEIVRSSI----GFRKGKIDPATKTFQAIRIYVNDELGELEQFLVNVKNILK 217
Query: 359 PGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE--TWIRQIIQ 416
GRL V+SFHSLEDRIVK F +E++E + +DD + W+
Sbjct: 218 KDGRLVVVSFHSLEDRIVKNFF-------KENSEKPVVRSKYAKDDMTIDPNKWL----- 265
Query: 417 GWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
KI+T + + PS +E LN R RSAKLR + I
Sbjct: 266 ----KIITNKALAPSDKEVGLNIRARSAKLRAAKAI 297
>gi|57650291|ref|YP_186055.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus COL]
gi|151221301|ref|YP_001332123.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus str. Newman]
gi|418570788|ref|ZP_13135049.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21283]
gi|440708390|ref|ZP_20889056.1| 16S rRNA (cytosine(1402)-N(4))-methyltransferase [Staphylococcus
aureus subsp. aureus 21282]
gi|68565417|sp|Q5HGQ2.1|RSMH_STAAC RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|262826643|sp|A6QG79.1|RSMH_STAAE RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|57284477|gb|AAW36571.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus COL]
gi|150374101|dbj|BAF67361.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus str. Newman]
gi|371982968|gb|EHP00116.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21283]
gi|436504973|gb|ELP40934.1| 16S rRNA (cytosine(1402)-N(4))-methyltransferase [Staphylococcus
aureus subsp. aureus 21282]
Length = 311
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 124/335 (37%), Positives = 174/335 (51%), Gaps = 30/335 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI VML E +D + ++DCTLG AGH+ ++ + I +D D +A+ A+
Sbjct: 4 HISVMLNETIDYLNVKEN-GVYIDCTLGGAGHALYLLNQLNDDGRLIAIDQDQTAIDNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L LH H NFR + +L D NI VD I DLG+SS Q++ P
Sbjct: 63 EVLKDHLHRVTFVH-------SNFRELTQILK--DLNI--EKVDGIYYDLGVSSPQLDIP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D LDMRMD L A +I+N+W + ++ YGEE + +I R
Sbjct: 112 ERGFSYHHDATLDMRMDQTQELTAYEIVNNWSYEALVKIFYRYGEEKFSKQIARRIEAHR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +T ELVD+I+ P + RR+G A RVFQALRIAVNDEL E S+ +
Sbjct: 172 EQQPITTTLELVDIIKEGIPA-KARRKGG-HPAKRVFQALRIAVNDELSAFEDSIEQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
+ GR+ VI+FHSLEDR+ KQ F ++ E E R + I E + ++
Sbjct: 230 LVKVDGRISVITFHSLEDRLCKQVF--------QEYEKGPEVPRGL--PVIPEAYTPKL- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
K + ++PIT + E+ N R RSAKLRV +
Sbjct: 279 -----KRVNRKPITATEEDLDDNNRARSAKLRVAE 308
>gi|78356081|ref|YP_387530.1| 16S rRNA m(4)C1402 methyltransferase [Desulfovibrio alaskensis G20]
gi|88909199|sp|Q313R1.1|RSMH_DESDG RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|78218486|gb|ABB37835.1| Ribosomal RNA small subunit methyltransferase H [Desulfovibrio
alaskensis G20]
Length = 325
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 120/346 (34%), Positives = 180/346 (52%), Gaps = 34/346 (9%)
Query: 110 QQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPS 169
+ Q ++H+PV+L EVL S R ++D TLG GHS AI+ +G+D D
Sbjct: 11 RHQYTAHVPVLLDEVLHYLSPVRG-GRYLDGTLGLGGHSEAIMNRCGGDAWLLGLDRDRE 69
Query: 170 ALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSS 229
ALA A L + T + +++ +I +G+D L+D+G+SS
Sbjct: 70 ALAAASGRLAPFGD-------RVTTRYACYSQFAAIMDEIGW----TGLDGALIDIGVSS 118
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDIL-NSWPDAEVGRVLREYGEESNWHLLQ 288
MQ++ P RGFS DGPLDMRMDP + + +L N+ + ++ YGE+ +
Sbjct: 119 MQIDTPSRGFSFYADGPLDMRMDPSGDMPSAGVLVNTGSVERLKEIISTYGEDPMAGRIA 178
Query: 289 NKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLES 348
IV AR R + +T L ++++S P + R + ATR FQALR+AVN EL+ LE+
Sbjct: 179 RAIVDARARNPIETTARLAEVVESAYPA-KWRAKSRNHPATRTFQALRMAVNGELEELET 237
Query: 349 SLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE 408
L A D + PGGR+ VI+FHSLEDR+VK F R++A+G +
Sbjct: 238 FLAAIVDRMNPGGRIVVITFHSLEDRLVKNAF-------RDEAKG-----------CLCP 279
Query: 409 TWIRQIIQGWNGK--ILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
I + G + +LT++P+T E + N R SAKLR ++I
Sbjct: 280 RHIPVCVCGKKPRVNVLTRKPVTAGQAELQANSRASSAKLRAAERI 325
>gi|410658129|ref|YP_006910500.1| rRNA small subunit methyltransferase H [Dehalobacter sp. DCA]
gi|410661119|ref|YP_006913490.1| rRNA small subunit methyltransferase H [Dehalobacter sp. CF]
gi|409020484|gb|AFV02515.1| rRNA small subunit methyltransferase H [Dehalobacter sp. DCA]
gi|409023475|gb|AFV05505.1| rRNA small subunit methyltransferase H [Dehalobacter sp. CF]
Length = 312
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 127/358 (35%), Positives = 178/358 (49%), Gaps = 73/358 (20%)
Query: 116 HIPVMLGEVLD-VFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
H V+L E ++ +F+ + +VDCTLG AGHS+ +++ + D D +A+A A
Sbjct: 5 HQSVLLQETIEMLFTDPDGL--YVDCTLGGAGHSALLLQRLSASGRLVCFDQDETAVANA 62
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
R + + F KNF ++ I N L I+ DLG+SS Q++
Sbjct: 63 RMKFAN--------DPRVTVFQKNFVELEDT---IRANSLLPAA-GIMYDLGVSSPQLDE 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV-Q 293
ERGFS + D LDMRMD + L AE+I+NSW ++ ++R+YGEE W L K + +
Sbjct: 111 AERGFSYMRDAVLDMRMDRRKPLTAEEIVNSWSVEDLTGIIRDYGEE-KWALRIAKFIGE 169
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +TG+LV++I++ P RR+G A R FQALRIAVN EL+ LE +L
Sbjct: 170 ARTHDRIRTTGQLVEIIKNAVPAA-ARREG-PHPAKRTFQALRIAVNKELEVLEETLDQA 227
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
CL GGR+ VI+FHSLEDRIVK F
Sbjct: 228 LHCLQDGGRIAVITFHSLEDRIVKNKF--------------------------------- 254
Query: 414 IIQGWNGK-------------------ILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
Q W GK ++ K+P+ PS EEE N R RSAKLR +K+
Sbjct: 255 --QSWMGKCTCPPSLPVCCCGVKPLARLVNKKPVVPSREEENDNPRSRSAKLRTAEKL 310
>gi|386846706|ref|YP_006264719.1| S-adenosyl-methyltransferase MraW [Actinoplanes sp. SE50/110]
gi|359834210|gb|AEV82651.1| S-adenosyl-methyltransferase MraW [Actinoplanes sp. SE50/110]
Length = 360
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 120/344 (34%), Positives = 176/344 (51%), Gaps = 33/344 (9%)
Query: 111 QQQSSHIPVMLGEVLDVFSSS--RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDP 168
+ + +H+PV+L L++ + R VD TLG GH+ A++ PE L IG+D D
Sbjct: 7 EPRGAHVPVLLERCLELLGPALARPGAVHVDFTLGLGGHAEAVLERFPEAVL-IGLDRDT 65
Query: 169 SALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMS 228
ALA +R L + H + + VL ++D + SG L DLG+S
Sbjct: 66 EALAHSRHRLARFAE-------RIHLVHAVYHELPRVLDELDIPAIDSG----LFDLGVS 114
Query: 229 SMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQ 288
S+Q++ +RGF+ D PLDMRMD + AE+++N++ E+ R+LR+YGEE +
Sbjct: 115 SLQLDEADRGFAYAQDAPLDMRMDQSRGITAEEVVNTYEPGELVRILRQYGEEKFAPRVV 174
Query: 289 NKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLES 348
+ IV+ R + + ST L +LI+ P RR G A R FQALRI VN EL LES
Sbjct: 175 SAIVRERQKARIVSTARLAELIKDAIPAA-ARRTGG-NPAKRSFQALRIEVNGELDVLES 232
Query: 349 SLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE 408
++ A D L+PGGRL V+S+ SLEDRIVK+ + R +
Sbjct: 233 AIPAALDVLSPGGRLVVMSYQSLEDRIVKRALTA-----------------RARSTGPID 275
Query: 409 TWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ G ++LT+ PS E N R S KLR +++I
Sbjct: 276 LPVELPGTGPTLRLLTRGSELPSEAEVAENPRAASVKLRAVERI 319
>gi|94994874|ref|YP_602972.1| S-adenosyl-methyltransferase MraW [Streptococcus pyogenes
MGAS10750]
gi|94548382|gb|ABF38428.1| S-adenosyl-methyltransferase mraW [Streptococcus pyogenes
MGAS10750]
Length = 337
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 120/348 (34%), Positives = 189/348 (54%), Gaps = 37/348 (10%)
Query: 109 IQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDP 168
+ ++ H+ V+L E +D+ + +VD TLG +GHS+ ++ E D D
Sbjct: 21 VMTKEFHHVTVLLHETVDMLDI-KPNGIYVDATLGGSGHSAYLLSKLSEQGHLYCFDQDQ 79
Query: 169 SALAKARAHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQ--IDENILRSGVDAILMD 224
A+ A+ L S + GQ TF K NFRH+K+ L +DE +D IL D
Sbjct: 80 KAIDNAQVTLKSYIDKGQV-------TFIKDNFRHLKARLTALGVDE------IDGILYD 126
Query: 225 LGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNW 284
LG+SS Q++ ERGFS D PLDMRMD Q+ L A +++N++P ++ ++ +YGE+
Sbjct: 127 LGVSSPQLDERERGFSYKQDAPLDMRMDRQSLLTAYEVVNTYPFNDLVKIFFKYGEDKFS 186
Query: 285 HLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELK 344
+ KI QAR + +T EL +LI++ P +++G A ++FQA+RI VNDEL
Sbjct: 187 KQIARKIEQARAIKPIETTTELAELIKAAKPAKELKKKGH--PAKQIFQAIRIEVNDELG 244
Query: 345 TLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDD 404
+ S+ + LA GR+ VI+FHSLEDR+ KQ F +E + + + + +
Sbjct: 245 AADESIQDAMELLALDGRISVITFHSLEDRLTKQLF-------KEASTVDVPKGLPLIPE 297
Query: 405 NINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++ T+ ++++++PI PS E N R SAKLRV +KI
Sbjct: 298 DMKPTF----------ELVSRKPILPSHSELTANKRAHSAKLRVAKKI 335
>gi|452204637|ref|YP_007484766.1| ribosomal RNA small subunit methyltransferase H [Dehalococcoides
mccartyi BTF08]
gi|452111693|gb|AGG07424.1| ribosomal RNA small subunit methyltransferase H [Dehalococcoides
mccartyi BTF08]
Length = 349
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 135/341 (39%), Positives = 180/341 (52%), Gaps = 43/341 (12%)
Query: 116 HIPVMLGEV---LDVFSSSRTITSFVDCTLGAAGHSSAIIR-AHPELKLHIGVDVDPSAL 171
HIPVML E L V R +VDCTLGA GHS AI+ ++P +L + +D DPSA+
Sbjct: 6 HIPVMLEESIQGLGVIPGGR----YVDCTLGAGGHSEAILEHSYPGGQL-LSIDADPSAI 60
Query: 172 AKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQ 231
A L S G + NF ++K + + + V IL DLG+SSMQ
Sbjct: 61 TLAAERLKSF--GSS-----VLLVNDNFANLKDICQRYE----YMPVHGILFDLGLSSMQ 109
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ E GFS + PLDMR P+ L A DI+N + E+ ++ +YGEE + I
Sbjct: 110 LDRQESGFSFQIEAPLDMRFSPEQELTAADIINGYDVTELSDLIWKYGEEPFSRRIARAI 169
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
+ R +T EL I+ G R G I ATR FQALRIAVN+EL LES+L
Sbjct: 170 AEKR---PFKTTTELAAAIERAVGG----RHGRIHPATRTFQALRIAVNEELSHLESALS 222
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
L GGRL VIS+HSLEDRIVKQ F +++A+G I D+I +
Sbjct: 223 QAHSLLGHGGRLVVISYHSLEDRIVKQYF-------QKEAKG------CICPDDIPQCVC 269
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ +I+ +R ITPS EE N R RSAK+RV ++I
Sbjct: 270 D---HQPSLRIINRRVITPSDEEISRNPRSRSAKMRVAERI 307
>gi|354551988|ref|ZP_08971296.1| Ribosomal RNA small subunit methyltransferase H [Cyanothece sp.
ATCC 51472]
gi|353555310|gb|EHC24698.1| Ribosomal RNA small subunit methyltransferase H [Cyanothece sp.
ATCC 51472]
Length = 298
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/336 (36%), Positives = 170/336 (50%), Gaps = 56/336 (16%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H PV+ EV+D + ++D TLG GHS I+ A P++++ G+D+D A+A +
Sbjct: 16 HTPVLCQEVIDGLAIEPN-GHYLDATLGRGGHSRLILEAFPDVRV-TGIDLDEEAIAITQ 73
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
+ SL+ + + + NF +G+ + I+ DLG+SS Q + P
Sbjct: 74 ENF-SLMGDK-----RLQVWQGNFADYPGEIGEFN---------GIIADLGVSSPQFDVP 118
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS PLDMRM+ + SL A +I+N W + + +YGEE + ++VQ R
Sbjct: 119 ERGFSFRHQAPLDMRMNREQSLTAGEIINHWDQTSLADLFYQYGEERRSRAIARRLVQQR 178
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+T EL + I P + R G I ATRVFQALRIAVNDEL +LE L
Sbjct: 179 ---PFETTTELAEAIAKCFPPKQ--RYGRIHPATRVFQALRIAVNDELGSLERFLEKAPH 233
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L PGGR+G+ISFHSLEDR VK +F RD + +
Sbjct: 234 WLKPGGRIGIISFHSLEDRRVKYSF---------------------RDSLLLD------- 265
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
++TK+PI P EEE N R RSAKLR Q+
Sbjct: 266 ------VITKKPIIPQPEEEEKNPRSRSAKLRFAQR 295
>gi|386345407|ref|YP_006041571.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Streptococcus thermophilus JIM 8232]
gi|339278868|emb|CCC20616.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Streptococcus thermophilus JIM 8232]
Length = 316
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 124/341 (36%), Positives = 180/341 (52%), Gaps = 37/341 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG AGHSS ++ E D D A+ A+
Sbjct: 7 HVTVLLHETVDMLDI-KPDGIYVDATLGGAGHSSYLLSQLSEKGHLYCFDQDQKAIDNAQ 65
Query: 176 AHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
L + G TF K NFR++KS L E + S +D IL DLG+SS Q++
Sbjct: 66 VRLKDYIDKGMV-------TFIKDNFRNLKSNL----EALGVSEIDGILYDLGVSSPQLD 114
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
ERGFS D LDMRM+ +ASL A D++N++P ++ R+ +YGE+ + KI Q
Sbjct: 115 ERERGFSYKQDAKLDMRMNEEASLTAYDVVNTYPYNDLVRIFFKYGEDKFSKQIARKIEQ 174
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
R + +T EL ++I+S P +++G A ++FQA+RI VNDEL + S+
Sbjct: 175 VRQVKPIETTTELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADESIQEA 232
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTF--LSIIDHNREDAEGNEEELRNIRDDNINETWI 411
D LA GR+ VI+FHSLEDR+ KQ F S +D + +I
Sbjct: 233 LDLLAVDGRISVITFHSLEDRLTKQLFKEASTVDVPK------------------GLPFI 274
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ +Q ++ ++PI PS EE N R SAKLRV +KI
Sbjct: 275 PEDLQPKVA-LVNRKPILPSQEELEANNRSHSAKLRVAKKI 314
>gi|225850230|ref|YP_002730464.1| S-adenosyl-methyltransferase MraW [Persephonella marina EX-H1]
gi|262824804|sp|C0QP68.1|RSMH_PERMH RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|225646628|gb|ACO04814.1| S-adenosyl-methyltransferase MraW [Persephonella marina EX-H1]
Length = 293
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 126/342 (36%), Positives = 177/342 (51%), Gaps = 55/342 (16%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
H PV+ EVL F + + VD T+G GHS +++ PE L IG+D D AL KA
Sbjct: 3 EHYPVLHREVLSFFKNIKG-RYIVDATVGGGGHSFLLLKNLPETFL-IGIDKDDYALEKA 60
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRS----GVDAILMDLGMSSM 230
L+ F FR IK ID I+ S V +L DLG+S+
Sbjct: 61 EEKLSP--------------FKGRFRLIKGSFKDID-TIVHSMDIKYVSGVLFDLGVSTF 105
Query: 231 QVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNK 290
Q+ ERGFS + PLDMRMD A D++N + E+ +++++YGEE + +
Sbjct: 106 QLKT-ERGFSFQREEPLDMRMDRTQKKTAFDVVNRYTKIELEKIIKDYGEEKFARRIASA 164
Query: 291 IVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSL 350
IV+AR + + +T EL ++ +V P R+G I AT+ FQA+RI VN+EL+ ++ +
Sbjct: 165 IVEARKKKRIETTKELAQIVYNVYPP--PLRRGRIHPATKTFQAIRIEVNNELEEIKEGV 222
Query: 351 HACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETW 410
+ D L GG + VISFHSLEDRIVK + RE + L++I
Sbjct: 223 NKGIDLLEKGGIIAVISFHSLEDRIVKNIY-------RE-----RKRLKDI--------- 261
Query: 411 IRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ILTK+PITP EE R N RSAKLRV ++I
Sbjct: 262 ----------EILTKKPITPGTEEIRENPPSRSAKLRVAKRI 293
>gi|376260791|ref|YP_005147511.1| S-adenosyl-methyltransferase MraW [Clostridium sp. BNL1100]
gi|373944785|gb|AEY65706.1| S-adenosyl-methyltransferase MraW [Clostridium sp. BNL1100]
Length = 313
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 126/339 (37%), Positives = 177/339 (52%), Gaps = 32/339 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E ++ + ++ +VD T+G AGHSS I + E IG+D D A+ +
Sbjct: 5 HKSVLLDECIENLNINQE-GIYVDGTIGGAGHSSEIYKRLGEKGCLIGLDQDSFAVETSV 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L + QA ++ F KN R+ S LG S VD IL+DLG+SS Q++
Sbjct: 64 KRLGEI-ESQADFNVVNTNF-KNIRNACSELGI-------SEVDGILLDLGVSSHQLDEA 114
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
RGFS D PLDMRMD ++ L A D++N + + ++ R++R+YGEE + IV+AR
Sbjct: 115 SRGFSYQHDAPLDMRMDRKSELSAYDVVNKYSEQDIYRIIRDYGEEKWASRIAKFIVEAR 174
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +T ELVD I+ P RR G A R FQA+RI VN+EL L ++ C D
Sbjct: 175 QSKPIETTYELVDTIKRAVPS-SARRDGP-HPAKRTFQAIRIEVNNELGILNKTIEDCVD 232
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L GGRL +I+FHSLEDRIVK F ++ + T +
Sbjct: 233 LLKSGGRLCIITFHSLEDRIVKLQFNKMV------------------NPCTCPTSFPVCV 274
Query: 416 QGWNGK--ILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
G + ++ K+PI E N R RSAKLRV+QKI
Sbjct: 275 CGKKPRAVLVNKKPIVSDIRELEENPRARSAKLRVLQKI 313
>gi|313890654|ref|ZP_07824281.1| S-adenosyl-methyltransferase MraW [Streptococcus pseudoporcinus
SPIN 20026]
gi|416852587|ref|ZP_11909732.1| S-adenosyl-methyltransferase MraW [Streptococcus pseudoporcinus LQ
940-04]
gi|313120965|gb|EFR44077.1| S-adenosyl-methyltransferase MraW [Streptococcus pseudoporcinus
SPIN 20026]
gi|356740076|gb|EHI65308.1| S-adenosyl-methyltransferase MraW [Streptococcus pseudoporcinus LQ
940-04]
Length = 316
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 125/340 (36%), Positives = 177/340 (52%), Gaps = 35/340 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+L E +D+ + +VD TLG AGHS+ ++ E D D A+ A+
Sbjct: 7 HITVLLHETVDMLQV-KPDGIYVDATLGGAGHSAYLLSQLNEHGHLYCFDQDQKAIDNAQ 65
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L + TF K NFRH+KS + + +D IL DLG+SS Q++
Sbjct: 66 VFLAPFIEK------GMVTFIKDNFRHLKSQMQAHGVDF----IDGILYDLGVSSPQLDE 115
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS D PLDMRMD ASL A ++N + ++ R+ YGE+ + KI QA
Sbjct: 116 RERGFSYRQDAPLDMRMDSDASLTAYQVVNDYSFNDLVRIFFRYGEDRFSKQVARKIEQA 175
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +T EL +LI+S P +++G A ++FQA+RI VNDEL E SL
Sbjct: 176 RAIKPIETTAELAELIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAAEESLQQAM 233
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTF--LSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
D LA GR+ VI+FHSLEDR+ KQ F S++D + +I
Sbjct: 234 DVLALEGRISVITFHSLEDRLTKQLFKEASVVDVPK------------------GLPFIP 275
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ +Q ++++++PI PS EE N R SAKLRV +KI
Sbjct: 276 EEMQP-KFELVSRKPILPSKEELAENNRAHSAKLRVAKKI 314
>gi|418576441|ref|ZP_13140587.1| putative methyltransferase [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
gi|379325503|gb|EHY92635.1| putative methyltransferase [Staphylococcus saprophyticus subsp.
saprophyticus KACC 16562]
Length = 304
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 123/331 (37%), Positives = 174/331 (52%), Gaps = 30/331 (9%)
Query: 120 MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLN 179
ML E +D + + + +VDCTLG AGH+ ++ + I +D D +A+ A+ L
Sbjct: 1 MLKETID-YLNIKEDGVYVDCTLGGAGHALYLLNQLGDEGRLIAIDQDTTAIENAKEVLK 59
Query: 180 SLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGF 239
LH H NFR I +L D NI VD I DLG+SS Q++ PERGF
Sbjct: 60 EHLHKVTFVH-------NNFRKITEILN--DLNI--EKVDGIYYDLGVSSPQLDVPERGF 108
Query: 240 SVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGG 299
S D LDMRMD SL A +++N W ++ R+ YGEE + +I Q R +
Sbjct: 109 SYHHDAKLDMRMDQTQSLSAFEVVNEWEFEKLVRIFHRYGEEKFSKQIARRIEQNREQKP 168
Query: 300 LHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAP 359
+ +T ELVD+I+ P + RR+G A R+FQA+RIAVNDEL E SL D +
Sbjct: 169 IETTLELVDVIKEGIPA-KARRKGG-HPAKRIFQAIRIAVNDELSAFEDSLEQAIDAVKV 226
Query: 360 GGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWN 419
GR+ VI+FHSLEDR+ KQ F ++ E + R + I E + ++
Sbjct: 227 DGRISVITFHSLEDRLCKQMF--------QEYEKGPDVPRGL--PVIPEAYTPKL----- 271
Query: 420 GKILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
K + ++PI + E+ N R RSAKLRV +
Sbjct: 272 -KRVNRKPIIATDEDLEENNRARSAKLRVAE 301
>gi|384455966|ref|YP_005668561.1| S-adenosyl-methyltransferase MraW [Candidatus Arthromitus sp.
SFB-mouse-Yit]
gi|346984309|dbj|BAK79985.1| S-adenosyl-methyltransferase MraW [Candidatus Arthromitus sp.
SFB-mouse-Yit]
Length = 304
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/317 (36%), Positives = 167/317 (52%), Gaps = 32/317 (10%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
+VDCTLG GHSS I+ IG+D D A+ R Q +F
Sbjct: 17 YVDCTLGGGGHSSKILDGLNNTGRLIGIDQDQYAIDYCR---------QKFSGYDNISFV 67
Query: 197 K-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQA 255
+ NF++I +L I VD ILMDLG+SS Q++ +RGFS + +G LDMRMD
Sbjct: 68 QDNFKNIDLILKMIG----IEKVDGILMDLGVSSYQIDTDDRGFSYIRNGKLDMRMDTSQ 123
Query: 256 SLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTP 315
S A DI+N + + ++ + + YGEE + NKIV++R + +T +LV LI V P
Sbjct: 124 SFSAYDIINGYDEEKLSYIFKVYGEEKYHRRIANKIVESRKLNKISTTHDLVKLIDEVIP 183
Query: 316 GMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRI 375
+++G + + +VFQALRI VN EL+ LE ++ + L GGR+ +I+FHSLEDRI
Sbjct: 184 KFEIKKRGHL--SKKVFQALRIEVNGELEILEKAIIDAINHLNVGGRISIITFHSLEDRI 241
Query: 376 VKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEE 435
VK TF + E +D + ++ I I+ K+P+ PS E
Sbjct: 242 VKNTFNYL-----------ATECVCPKDFPVCRCEKKKEIS-----IINKKPVLPSGTEL 285
Query: 436 RLNCRCRSAKLRVIQKI 452
N R SAKLRV +K+
Sbjct: 286 SKNSRSASAKLRVAEKL 302
>gi|317501224|ref|ZP_07959429.1| S-adenosyl-L-methionine-dependent methyltransferase mraW 2
[Lachnospiraceae bacterium 8_1_57FAA]
gi|331090030|ref|ZP_08338919.1| ribosomal RNA small subunit methyltransferase H 2 [Lachnospiraceae
bacterium 3_1_46FAA]
gi|336439077|ref|ZP_08618695.1| ribosomal RNA small subunit methyltransferase H 2 [Lachnospiraceae
bacterium 1_1_57FAA]
gi|316897400|gb|EFV19466.1| S-adenosyl-L-methionine-dependent methyltransferase mraW 2
[Lachnospiraceae bacterium 8_1_57FAA]
gi|330402492|gb|EGG82061.1| ribosomal RNA small subunit methyltransferase H 2 [Lachnospiraceae
bacterium 3_1_46FAA]
gi|336016933|gb|EGN46708.1| ribosomal RNA small subunit methyltransferase H 2 [Lachnospiraceae
bacterium 1_1_57FAA]
Length = 311
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 117/338 (34%), Positives = 174/338 (51%), Gaps = 34/338 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D + + +VD TLG GH+ + R IG+D D A+ A
Sbjct: 5 HVSVLLNETVDGLNV-KPDGVYVDATLGGGGHAYEVCRRLGSKGRFIGIDQDADAIKAAG 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L G+ K N+R +K L +NI VD I++DLG+SS Q++
Sbjct: 64 ERLKGF--GE-----KVTIIRSNYRDMKPQL----QNIGVDKVDGIVIDLGVSSYQLDTA 112
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD + + A DI+N + ++E+ RV+R+YGE+ + IV+ R
Sbjct: 113 ERGFSYRVDAPLDMRMDQRQKMTARDIVNEYSESELYRVIRDYGEDKFAKNIAKHIVEER 172
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +TG+L ++I P M+ R+ + R FQA+RI +N EL L SL +
Sbjct: 173 RKNPIETTGQLNEIISHAIP-MKFRKTSG-HPSKRTFQAIRIELNHELDVLRESLDDMIE 230
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L PGGR+ +I+FHSLEDRIVK F R + + +
Sbjct: 231 MLNPGGRICIITFHSLEDRIVKSAF------------------RKNENPCTCPSHFPVCV 272
Query: 416 QGW--NGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
G GK++T++PI PS E N R +SAKLR+ ++
Sbjct: 273 CGKISKGKVITRKPILPSEAETESNSRSKSAKLRIFER 310
>gi|299821551|ref|ZP_07053439.1| S-adenosyl-methyltransferase [Listeria grayi DSM 20601]
gi|299817216|gb|EFI84452.1| S-adenosyl-methyltransferase [Listeria grayi DSM 20601]
Length = 313
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 125/339 (36%), Positives = 175/339 (51%), Gaps = 36/339 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D+ + +VD TLG AGHS ++ + D D +A+ A+
Sbjct: 7 HDTVLLHETVDMLDI-KPDGIYVDATLGGAGHSEYLLSKLNKKGHLYAFDQDQTAIDHAK 65
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQ--IDENILRSGVDAILMDLGMSSMQV 232
L P+ + TF K NFR +K L + + E VD IL DLG+SS Q+
Sbjct: 66 ERLA--------PYTGSVTFVKSNFRFMKEALAEHGVTE------VDGILYDLGVSSPQL 111
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ ERGFS D LDMRMD + SL A++++N W ++ R+ +YGEE + +I
Sbjct: 112 DVRERGFSYHQDAELDMRMDQEQSLTAKEVVNEWRYEDLVRIFFQYGEEKFSKQIAREIE 171
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
+ R + +TGELVD+I++ P R+ G RVFQA+RIAVNDEL + SL
Sbjct: 172 RRRSEKTIETTGELVDIIKTAIPAPARRKGGH--PGKRVFQAIRIAVNDELDAVSESLEK 229
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
L GR+ VI+FHSLEDRI KQ F + A+ L I D+
Sbjct: 230 ALLLLKTNGRISVITFHSLEDRITKQLF-----KQKTTAQETPRGLPVIPDEY------- 277
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ +++T++PI PS E N R RSAKLRVI K
Sbjct: 278 ----QPDFELVTRKPILPSEAEMATNNRARSAKLRVIAK 312
>gi|329942720|ref|ZP_08291499.1| S-adenosyl-methyltransferase MraW [Chlamydophila psittaci Cal10]
gi|332287316|ref|YP_004422217.1| S-adenosyl-methyltransferase [Chlamydophila psittaci 6BC]
gi|384450466|ref|YP_005663066.1| S-adenosyl-methyltransferase MraW [Chlamydophila psittaci 6BC]
gi|384451470|ref|YP_005664068.1| S-adenosyl-methyltransferase [Chlamydophila psittaci 01DC11]
gi|384452443|ref|YP_005665040.1| S-adenosyl-methyltransferase [Chlamydophila psittaci 08DC60]
gi|384453419|ref|YP_005666015.1| S-adenosyl-methyltransferase [Chlamydophila psittaci C19/98]
gi|384454398|ref|YP_005666993.1| S-adenosyl-methyltransferase [Chlamydophila psittaci 02DC15]
gi|392376557|ref|YP_004064335.1| putative S-adenosyl-methyltransferase [Chlamydophila psittaci RD1]
gi|407453887|ref|YP_006732995.1| S-adenosyl-methyltransferase MraW [Chlamydia psittaci 84/55]
gi|407455202|ref|YP_006734093.1| S-adenosyl-methyltransferase MraW [Chlamydia psittaci GR9]
gi|407456584|ref|YP_006735157.1| S-adenosyl-methyltransferase MraW [Chlamydia psittaci VS225]
gi|407457936|ref|YP_006736241.1| S-adenosyl-methyltransferase MraW [Chlamydia psittaci WS/RT/E30]
gi|407460554|ref|YP_006738329.1| S-adenosyl-methyltransferase MraW [Chlamydia psittaci WC]
gi|449071018|ref|YP_007438098.1| S-adenosyl-methyltransferase MraW [Chlamydophila psittaci Mat116]
gi|313847900|emb|CBY16895.1| putative S-adenosyl-methyltransferase [Chlamydophila psittaci RD1]
gi|325506769|gb|ADZ18407.1| S-adenosyl-methyltransferase [Chlamydophila psittaci 6BC]
gi|328814980|gb|EGF84969.1| S-adenosyl-methyltransferase MraW [Chlamydophila psittaci Cal10]
gi|328914560|gb|AEB55393.1| S-adenosyl-methyltransferase MraW [Chlamydophila psittaci 6BC]
gi|334692200|gb|AEG85419.1| S-adenosyl-methyltransferase [Chlamydophila psittaci C19/98]
gi|334693180|gb|AEG86398.1| S-adenosyl-methyltransferase [Chlamydophila psittaci 01DC11]
gi|334694155|gb|AEG87372.1| S-adenosyl-methyltransferase [Chlamydophila psittaci 02DC15]
gi|334695132|gb|AEG88348.1| S-adenosyl-methyltransferase [Chlamydophila psittaci 08DC60]
gi|405780646|gb|AFS19396.1| S-adenosyl-methyltransferase MraW [Chlamydia psittaci 84/55]
gi|405781745|gb|AFS20494.1| S-adenosyl-methyltransferase MraW [Chlamydia psittaci GR9]
gi|405783845|gb|AFS22592.1| S-adenosyl-methyltransferase MraW [Chlamydia psittaci VS225]
gi|405785142|gb|AFS23888.1| S-adenosyl-methyltransferase MraW [Chlamydia psittaci WS/RT/E30]
gi|405786811|gb|AFS25555.1| S-adenosyl-methyltransferase MraW [Chlamydia psittaci WC]
gi|449039526|gb|AGE74950.1| S-adenosyl-methyltransferase MraW [Chlamydophila psittaci Mat116]
Length = 298
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/338 (35%), Positives = 169/338 (50%), Gaps = 49/338 (14%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
SHIPV++ E L +F++ R F D T+GA GH+ A + +P + + D D +AL+ A
Sbjct: 6 SHIPVLVNECLSLFAN-RNPKFFCDVTVGAGGHAEAFLSEYPSIVSYDASDRDSAALSLA 64
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+ L + H FRH + + ++ D IL DLG+SSMQ++N
Sbjct: 65 KERLEKF-GDRVH-----------FRH--ASFEDLSKDSKEHVYDGILADLGVSSMQLDN 110
Query: 235 PERGFSVLGDG-PLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
RGFS GD LDMRMD + A ++LN+ + E+G++ REYGEE W + +V
Sbjct: 111 LSRGFSFQGDDHDLDMRMDVTKGITASEVLNTLREEELGKIFREYGEEPQWKNAASAVVH 170
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
R R + + +L D V P R R++ I T +FQALR+ VN E L+ L +
Sbjct: 171 FRKRKKIITVRDLKDATAKVFPSYRLRKK--IHPLTLIFQALRVYVNQEDLQLKVFLESA 228
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
LAPGGRL +ISF S EDR VK F R+
Sbjct: 229 MRWLAPGGRLIIISFCSSEDRPVKWFF-------------------------------RE 257
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ G ILTK+ + P+ EE R N RCRSAKLR +K
Sbjct: 258 AEKSGLGTILTKKVVMPTYEETRKNPRCRSAKLRCFEK 295
>gi|411001891|ref|ZP_11378220.1| 16S rRNA m(4)C1402 methyltransferase [Streptomyces globisporus
C-1027]
Length = 321
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/350 (34%), Positives = 178/350 (50%), Gaps = 46/350 (13%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITS-----FVDCTLGAAGHSSAIIRAHPELKLHIGVDVD 167
Q+ H+PVML LD+ + + + VDCTLG GHS A++ A P +L + +D D
Sbjct: 3 QTRHVPVMLQRCLDLLAPALQDPAHPQPVVVDCTLGLGGHSEALLAASPTARL-VALDRD 61
Query: 168 PSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG---VDAILMD 224
AL L G+ + + + +V ++ E + R G V +L D
Sbjct: 62 KEALR---------LSGE-----RLAPYGDRATLVHAVYDELPEVLARLGIAKVQGVLFD 107
Query: 225 LGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNW 284
LG+SSMQ++ +RGF+ D PLDMRMD + A ++LN++P E+ R+LR YGEE
Sbjct: 108 LGVSSMQLDEADRGFAYAQDAPLDMRMDQSTGMGAAEVLNTYPPGELVRILRAYGEEKQA 167
Query: 285 HLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELK 344
+ + IV+ R + ++ LV+LI+ P R G A R FQALRI VN EL
Sbjct: 168 KRIVSAIVREREKEPFSNSARLVELIRDALPQAAKRTGG--NPAKRTFQALRIEVNGELS 225
Query: 345 TLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDD 404
LE ++ A D LA GGR+ V+S+HSLEDR+VKQ F A G
Sbjct: 226 VLERAIPAAVDSLAVGGRIAVLSYHSLEDRLVKQVF----------AAGAA--------- 266
Query: 405 NINETWIRQIIQGWNGKI--LTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
N + + + + + ++ LT+ P+ EE N R A+LR Q+I
Sbjct: 267 NTAPSGLPVVPERYQPRLKQLTRGAELPTEEEVAENRRAAPARLRGAQRI 316
>gi|172035001|ref|YP_001801502.1| S-adenosyl-methyltransferase MraW [Cyanothece sp. ATCC 51142]
gi|263446171|sp|B1WZ70.1|RSMH_CYAA5 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|171696455|gb|ACB49436.1| putative methyltransferase [Cyanothece sp. ATCC 51142]
Length = 315
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/336 (36%), Positives = 170/336 (50%), Gaps = 56/336 (16%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H PV+ EV+D + ++D TLG GHS I+ A P++++ G+D+D A+A +
Sbjct: 33 HTPVLCQEVIDGLAIEPN-GHYLDATLGRGGHSRLILEAFPDVRV-TGIDLDEEAIAITQ 90
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
+ SL+ + + + NF +G+ + I+ DLG+SS Q + P
Sbjct: 91 ENF-SLMGDK-----RLQVWQGNFADYPGEIGEFN---------GIIADLGVSSPQFDVP 135
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS PLDMRM+ + SL A +I+N W + + +YGEE + ++VQ R
Sbjct: 136 ERGFSFRHQAPLDMRMNREQSLTAGEIINHWDQTSLADLFYQYGEERRSRAIARRLVQQR 195
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+T EL + I P + R G I ATRVFQALRIAVNDEL +LE L
Sbjct: 196 ---PFETTTELAEAIAKCFPPKQ--RYGRIHPATRVFQALRIAVNDELGSLERFLEKAPH 250
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L PGGR+G+ISFHSLEDR VK +F RD + +
Sbjct: 251 WLKPGGRIGIISFHSLEDRRVKYSF---------------------RDSLLLD------- 282
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
++TK+PI P EEE N R RSAKLR Q+
Sbjct: 283 ------VITKKPIIPQPEEEEKNPRSRSAKLRFAQR 312
>gi|159038986|ref|YP_001538239.1| S-adenosyl-methyltransferase MraW [Salinispora arenicola CNS-205]
gi|262826354|sp|A8LX88.1|RSMH_SALAI RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|157917821|gb|ABV99248.1| S-adenosyl-methyltransferase MraW [Salinispora arenicola CNS-205]
Length = 372
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 117/345 (33%), Positives = 180/345 (52%), Gaps = 38/345 (11%)
Query: 113 QSSHIPVMLGEVLDVFSSS-----RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVD 167
+ +H+PV+L L++ + + RT+ +VD TLG GH+ A++ HP+ L +G+D D
Sbjct: 9 RGAHVPVLLERCLELLAPALGRAGRTV--YVDATLGLGGHAEAVLATHPQTML-VGLDRD 65
Query: 168 PSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGM 227
ALA AR L + H + + VL ++ + VD IL DLG+
Sbjct: 66 TEALAHARVRLARFAD-------RVHLEHAVYDELPDVLDRLGHPV----VDGILFDLGV 114
Query: 228 SSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLL 287
SS+Q++ P+RGF+ D PLDMRMD L AE+++N++P ++ RVLR YGEE +
Sbjct: 115 SSLQLDAPDRGFAYAQDAPLDMRMDQTRGLTAEEVVNTYPHPDLARVLRVYGEEKFAPRI 174
Query: 288 QNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLE 347
+ IV+ R R + S+ L +L++ P RR G A R FQALRI VN EL LE
Sbjct: 175 ASAIVRERERDPITSSARLAELVRQTIPAP-ARRTGG-HPAKRTFQALRIEVNRELAALE 232
Query: 348 SSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNIN 407
++L A D L GRL V+S+HSLEDR+ K +++ D +R
Sbjct: 233 TALPAALDRLTIEGRLVVLSYHSLEDRLTK---VALAD--------------RVRSKGPV 275
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ + G ++L++ P E +N R S +LR +++
Sbjct: 276 DLPVELPGTGPTFRLLSRGAELPGEAEVAMNPRAASVRLRAAERL 320
>gi|296129435|ref|YP_003636685.1| S-adenosyl-methyltransferase MraW [Cellulomonas flavigena DSM
20109]
gi|296021250|gb|ADG74486.1| S-adenosyl-methyltransferase MraW [Cellulomonas flavigena DSM
20109]
Length = 333
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/272 (39%), Positives = 152/272 (55%), Gaps = 22/272 (8%)
Query: 114 SSHIPVMLGEVLDVFSSSRTITS--FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
S H+PV+L +++ + + VDCTLG GH+ ++RA +++ +G+D DP AL
Sbjct: 10 SRHVPVLLERCVELLAPALAAPGAVLVDCTLGMGGHTEGVLRAIEHVRV-VGIDRDPQAL 68
Query: 172 AKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILR---SGVDAILMDLGMS 228
A A L F + F + +V +I + + R GV +LMDLG+S
Sbjct: 69 ALASERLAP--------------FGERFTGVHAVYDEIGDVVERLGLPGVQGVLMDLGVS 114
Query: 229 SMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQ 288
S+Q++ ERGF+ D PLDMRMDP A D+LN++ + ++ RVLR YGEE +
Sbjct: 115 SLQLDEAERGFAYAHDAPLDMRMDPTTGPTAADVLNTYDERDIARVLRVYGEERFAARIA 174
Query: 289 NKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLES 348
+V+ R R L T ELVD++++ P R G A R FQALRI VN EL LE
Sbjct: 175 RGVVRFRERTPLTRTSELVDIVRAGVPAATRRTGGH--PAKRTFQALRIEVNGELAALER 232
Query: 349 SLHACFDCLAPGGRLGVISFHSLEDRIVKQTF 380
+L A D LA GGR+ V S+ SLEDR+VK+
Sbjct: 233 ALPAAIDVLAVGGRIVVESYQSLEDRLVKRAL 264
>gi|29832656|ref|NP_827290.1| S-adenosyl-methyltransferase MraW [Streptomyces avermitilis
MA-4680]
gi|42559459|sp|Q82AE4.1|RSMH_STRAW RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|29609776|dbj|BAC73825.1| putative S-adenosylmethionine-dependent methyltransferase
[Streptomyces avermitilis MA-4680]
Length = 318
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/273 (39%), Positives = 151/273 (55%), Gaps = 22/273 (8%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITS--FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSA 170
QS H+PVML LD+ + + T VDCTLG GHS A++ PE +L + +D D A
Sbjct: 3 QSRHVPVMLQRCLDMLAPALTEPGAVVVDCTLGLGGHSEALLTQFPEARL-VALDRDKEA 61
Query: 171 LAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGV---DAILMDLGM 227
L L G+ + F + +V ++ + + R GV +L DLG+
Sbjct: 62 LR---------LSGE-----RLAPFGDRATLVHAVYDELPDVLDRLGVPRVQGVLFDLGV 107
Query: 228 SSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLL 287
SSMQ++ +RGF+ D PLDMRMD + A ++LN++P E+ R+LR YGEE +
Sbjct: 108 SSMQLDEADRGFAYAQDAPLDMRMDQTTGISAAEVLNTYPPGEIVRILRAYGEEKQAKRI 167
Query: 288 QNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLE 347
+ IV+ R + ++ LV+LI+ P R G A R FQALRI VN EL LE
Sbjct: 168 VSAIVREREKEPFSNSARLVELIRDSLPQAAKRTGG--NPAKRTFQALRIEVNGELSVLE 225
Query: 348 SSLHACFDCLAPGGRLGVISFHSLEDRIVKQTF 380
++ A LA GGR+ V+S+HSLEDR+VKQ F
Sbjct: 226 RAIPAAVKALAVGGRIAVLSYHSLEDRLVKQVF 258
>gi|218780979|ref|YP_002432297.1| S-adenosyl-methyltransferase MraW [Desulfatibacillum alkenivorans
AK-01]
gi|263447357|sp|B8FBS6.1|RSMH_DESAA RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|218762363|gb|ACL04829.1| S-adenosyl-methyltransferase MraW [Desulfatibacillum alkenivorans
AK-01]
Length = 326
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/345 (37%), Positives = 177/345 (51%), Gaps = 47/345 (13%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAII-RAHPELKLHIGVDVDPSALAKA 174
H+ VM EVL + S + VD T G GH+ AI+ R P+ L IG D+D A+ A
Sbjct: 5 HVSVMKQEVLSLLSPAPGHV-VVDGTFGGGGHARAILERILPD-GLLIGTDLDEDAVTNA 62
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+A + + F NF +I++VL Q +G + I++DLG+S +
Sbjct: 63 QACFADVQN-------NFRIFHDNFSNIRAVLDQCG----LAGANGIVLDLGVSLHLLEK 111
Query: 235 PERGFSVLGDGPLDMRMDPQAS-LKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
RGFS + PLDMRMD KA D++N++ E+ R+ EYGEE + +IVQ
Sbjct: 112 SGRGFSFQREEPLDMRMDGSGGGPKAMDVVNAYSQDELARIFLEYGEERQAKRIARRIVQ 171
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
R + ++G L D++ S G GR I ATRVFQALRI VN+EL LE L C
Sbjct: 172 RREDEPITTSGRLADIVASAVKGKPGR----IHPATRVFQALRIHVNNELAHLEKFLETC 227
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAE------GNEEELRNIRDDNIN 407
DCL PGGRL +ISFHSLEDRIVK+ F ++ + GN+ ++
Sbjct: 228 LDCLLPGGRLCIISFHSLEDRIVKRRFAALAQGCTCPPDFPVCICGNQPKV--------- 278
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
KILTK+ + PS E N RSAK+R ++K+
Sbjct: 279 -------------KILTKKVVKPSQAEVEKNPMSRSAKIRAMEKL 310
>gi|342217849|ref|ZP_08710487.1| S-adenosyl-methyltransferase MraW [Megasphaera sp. UPII 135-E]
gi|341592836|gb|EGS35696.1| S-adenosyl-methyltransferase MraW [Megasphaera sp. UPII 135-E]
Length = 311
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/313 (36%), Positives = 163/313 (52%), Gaps = 31/313 (9%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
+VDCTLG GH++ + IG+D D AL A+ L+ +
Sbjct: 25 YVDCTLGGGGHAATLGMLLDNEAWLIGLDQDKEALKAAKTRLDKTVSCH------VTCVQ 78
Query: 197 KNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQAS 256
+NFR +K L ++ + VD I+ DLG+SS Q++ PERGFS + DGPLDMRM+ +
Sbjct: 79 RNFREVKETLYELGVD----AVDGIIFDLGVSSYQLDMPERGFSYMHDGPLDMRMNQENK 134
Query: 257 LKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPG 316
A DI+N++ + E+ R++++YGEE + IV AR T ELV +I+ P
Sbjct: 135 KTAADIVNTYREEELYRIIKDYGEERWAKRIAMFIVAARKEKTFTRTQELVQVIKKAIP- 193
Query: 317 MRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIV 376
G R+ A R FQA+RI VN EL L+ SL A CL GG++GVI+FHSLEDRIV
Sbjct: 194 -VGARKDGPHPAKRTFQAIRIEVNGELSILQQSLEAAVSCLKRGGKIGVITFHSLEDRIV 252
Query: 377 KQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKI-LTKRPITPSAEEE 435
K+TF + + + I + + + +T + I PS EE
Sbjct: 253 KRTF------------------KQLATECICPPHMPVCTCDHHASLKITNKVIVPSPEEI 294
Query: 436 RLNCRCRSAKLRV 448
N R RSAKLR+
Sbjct: 295 MHNPRARSAKLRI 307
>gi|330469297|ref|YP_004407040.1| 16S rRNA m(4)C1402 methyltransferase [Verrucosispora maris
AB-18-032]
gi|328812268|gb|AEB46440.1| 16S rRNA m(4)C1402 methyltranserfase [Verrucosispora maris
AB-18-032]
Length = 394
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/276 (40%), Positives = 158/276 (57%), Gaps = 27/276 (9%)
Query: 113 QSSHIPVMLGEVLDVFSSS-----RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVD 167
+ +H+PV+L L++ + + RT+ VD TLG AGH+ A+++AHPE L +G+D D
Sbjct: 33 RGTHVPVLLERCLELLAPALGRGGRTV--HVDATLGLAGHAEAVLQAHPETIL-VGLDRD 89
Query: 168 PSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG---VDAILMD 224
AL AR L FA +V ++ E + R G VD IL D
Sbjct: 90 TEALEHARVRLAR--------------FADRVHLEHAVYDELPEVLDRLGYPTVDGILFD 135
Query: 225 LGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNW 284
LG+SS+Q++ P+RGF+ D PLDMRMD + AE+++N++ E+ RVLR YGEE
Sbjct: 136 LGVSSLQLDAPDRGFAYAQDAPLDMRMDQTRGVTAEEVVNTYTHPELARVLRVYGEEKFA 195
Query: 285 HLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELK 344
+ + I++ R R + S+ L +L++ P RR G A R FQALRI VN EL
Sbjct: 196 GRIASAIIRERERVRITSSARLAELVRESIPAP-ARRTGG-HPAKRTFQALRIEVNRELA 253
Query: 345 TLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTF 380
LE++L A D L+ GGRL V+S+HSLEDR+ KQ
Sbjct: 254 VLETALPAALDRLSVGGRLVVLSYHSLEDRLTKQAL 289
>gi|377831339|ref|ZP_09814316.1| S-adenosyl-methyltransferase [Lactobacillus mucosae LM1]
gi|377554766|gb|EHT16468.1| S-adenosyl-methyltransferase [Lactobacillus mucosae LM1]
Length = 314
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/340 (37%), Positives = 177/340 (52%), Gaps = 35/340 (10%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
+H+ V+L E + + T +VD TLG GHS AI++ L+ D D +A+
Sbjct: 5 NHVTVLLNEAVAGLNIKPT-GIYVDATLGGGGHSEAILKQLTTGHLY-SFDQDQTAIDYN 62
Query: 175 RAHLNSLLHGQAHPHLKT--HTFAKN-FRHIKSVLGQIDENILRSGVDAILMDLGMSSMQ 231
+ HL P+LK TF KN FRH+KS L + + + +D I+ DLG+SS Q
Sbjct: 63 QEHLK--------PYLKAGQETFIKNNFRHLKSALNA--QGVTK--IDGIVYDLGVSSPQ 110
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ +RGFS D LDMRMD SL A +I+N WP + ++L YGEE + I
Sbjct: 111 FDDAKRGFSYQHDALLDMRMDQSQSLSAMEIVNEWPYERLVKILHRYGEEKFAKQIARAI 170
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
+ R + + +T EL +++++ P RR G A + FQA+RIAVNDEL LE SL
Sbjct: 171 ERQRKQAPIKTTLELAEVVKNAIPAA-ARRHGG-HPAKKSFQAIRIAVNDELGALEDSLE 228
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
F+ L GGR+ VI+F SLEDR+VK F +E A E E
Sbjct: 229 QAFEMLNVGGRISVITFQSLEDRLVKTMF-------KEQASLPELPPGLPVVPPDMEPSF 281
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++ K+PI PS E R N R SAKLR+I+K
Sbjct: 282 ---------KLVNKKPILPSDMELRDNHRSHSAKLRIIEK 312
>gi|228474969|ref|ZP_04059697.1| S-adenosyl-methyltransferase MraW [Staphylococcus hominis SK119]
gi|314936659|ref|ZP_07844006.1| S-adenosyl-methyltransferase MraW [Staphylococcus hominis subsp.
hominis C80]
gi|418620410|ref|ZP_13183214.1| S-adenosyl-methyltransferase MraW [Staphylococcus hominis VCU122]
gi|228270954|gb|EEK12342.1| S-adenosyl-methyltransferase MraW [Staphylococcus hominis SK119]
gi|313655278|gb|EFS19023.1| S-adenosyl-methyltransferase MraW [Staphylococcus hominis subsp.
hominis C80]
gi|374822540|gb|EHR86560.1| S-adenosyl-methyltransferase MraW [Staphylococcus hominis VCU122]
Length = 311
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/335 (36%), Positives = 173/335 (51%), Gaps = 30/335 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ VML E +D +VDCTLG AGH+ ++ + I +D D +AL A+
Sbjct: 4 HVSVMLKETIDELDIKED-GIYVDCTLGGAGHALYLLNQLNDDGRLIAIDQDTTALENAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L LH H NFR + +L +N+ VD I DLG+SS Q++ P
Sbjct: 63 EVLRDHLHKVTFVH-------NNFRELTDIL----KNLGIEKVDGIYYDLGVSSPQLDIP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D LDMRMD L A D++N WP + ++ YGEE + +I R
Sbjct: 112 ERGFSYHHDAKLDMRMDQTQELTAYDVVNDWPYEALVKIFYRYGEEKFSKQIARRIEAHR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +T ELVD+I+ P + RR+G A R+FQA+RIAVNDEL E S+ +
Sbjct: 172 EQQPIETTLELVDIIKEGIPA-KARRKGG-HPAKRIFQAIRIAVNDELSAFEDSIEQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
+ GR+ VI+FHSLEDR+ KQ F ++ E + R + I E + ++
Sbjct: 230 HVKVKGRISVITFHSLEDRLCKQIF--------QEYEKGPDVPRGL--PIIPEAYTPKL- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
K + ++PIT + E+ N R RSAKLRV +
Sbjct: 279 -----KRVNRKPITATEEDLDENNRARSAKLRVAE 308
>gi|149022854|gb|EDL79748.1| similar to RIKEN cDNA 0610027B03, isoform CRA_a [Rattus norvegicus]
gi|149022855|gb|EDL79749.1| similar to RIKEN cDNA 0610027B03, isoform CRA_a [Rattus norvegicus]
Length = 406
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/386 (33%), Positives = 202/386 (52%), Gaps = 27/386 (6%)
Query: 77 AKATSARVGVGMGLVKEKRRTRSNKDYDYESIIQQQQSSHIPVMLGEVLDVFSSSRTITS 136
A T + G+ L ++ RS ++ D E++ + HIPVM+ EV+ + +
Sbjct: 38 AMHTEYKASEGIALCDTQKVYRS-EETDSEAMAKL----HIPVMVDEVVQCLTPQKG-QV 91
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
F+D T G+ GHS AI++ P++ ++ +D DP A A L+ + Q H L
Sbjct: 92 FLDMTFGSGGHSKAILQKEPDVTVY-ALDRDPVAFTLAE-RLSEMYPTQIHAMLG----- 144
Query: 197 KNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMD---- 252
F +++L + + VD +L+DLG SSMQ++ PERGFS+ DGPLDMRMD
Sbjct: 145 -QFSQAETLL--MKAGVQPGTVDGVLLDLGCSSMQLDAPERGFSLRKDGPLDMRMDGDRY 201
Query: 253 PQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQS 312
P A D++N+ + +LR YGEE + + + I+QAR + T +L ++
Sbjct: 202 PDMP-TAADVVNALDQQALASILRAYGEEKHAKKIASAIIQARSTYPISRTQQLASIVAG 260
Query: 313 VTP--GMRGRR---QGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVIS 367
P + R+ Q AT+ FQALRI VN+EL L + L L PGGRL +S
Sbjct: 261 AFPPSAIYARKDLLQRSTHIATKTFQALRIFVNNELNELYTGLRTAQKFLKPGGRLVALS 320
Query: 368 FHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQG-WNGKILTKR 426
FHSLEDRIVK+ L I R + ++ + + D+ +E R+ ++ +++ K+
Sbjct: 321 FHSLEDRIVKRFLLGISMTERFNLSIRQKVRQTSQMDSDHEIEERRCVRAPLKWELIHKK 380
Query: 427 PITPSAEEERLNCRCRSAKLRVIQKI 452
+TP ++ + N R RSAKLR K+
Sbjct: 381 VLTPEDQDVQANPRGRSAKLRAAIKL 406
>gi|456369441|gb|EMF48341.1| rRNA small subunit methyltransferase H [Streptococcus parauberis
KRS-02109]
Length = 318
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 125/341 (36%), Positives = 179/341 (52%), Gaps = 37/341 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+L + +D+ + + +VD TLG AGHS+ ++ E D D A+ A+
Sbjct: 7 HITVLLNKTVDMLNV-KPDGIYVDATLGGAGHSAYLLSQLNENGHLYCFDQDQKAIDNAQ 65
Query: 176 AHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
L + GQ TF K NFR++KS L + + +D IL DLG+SS Q++
Sbjct: 66 VFLKPFIDKGQV-------TFIKDNFRNLKSRLASLG----VTEIDGILYDLGVSSPQLD 114
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
ERGFS D PLDMRMD +A L A ++N + ++ R+ YGE+ + KI Q
Sbjct: 115 ERERGFSYRQDAPLDMRMDTEAELTAYQVVNHYAFNDLVRIFFRYGEDKFSKQIARKIEQ 174
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +T EL +LI+S P +++G A ++FQA+RI VNDEL E S+
Sbjct: 175 AREIKPIETTAELAELIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAAEESIQQA 232
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTF--LSIIDHNREDAEGNEEELRNIRDDNINETWI 411
D LA GR+ VI+FHSLEDR+ KQ F S +D + N I
Sbjct: 233 MDILALDGRISVITFHSLEDRLTKQLFKEASTVDVPK------------------NIPII 274
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ +Q +++++PI PS EE N R SAKLRV +KI
Sbjct: 275 PEHLQP-KFDLVSRKPILPSLEELEANNRAHSAKLRVARKI 314
>gi|384549935|ref|YP_005739187.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus JKD6159]
gi|302332784|gb|ADL22977.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus JKD6159]
Length = 311
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/335 (36%), Positives = 174/335 (51%), Gaps = 30/335 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI VML E +D + ++DCTLG AGH+ ++ + I +D D +A+ A+
Sbjct: 4 HISVMLNETIDYLNVKEN-GVYIDCTLGGAGHALYLLNQLNDDGRLIAIDQDQAAIDNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L LH H NFR + +L D NI VD I DLG+SS Q++ P
Sbjct: 63 EVLKDHLHKVTFVH-------SNFRELTQILK--DLNI--EKVDGIYYDLGVSSPQLDIP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D LDMRMD L A +I+N+W + ++ YGEE + +I R
Sbjct: 112 ERGFSYHHDATLDMRMDQTQELTAYEIVNNWSYEALVKIFYRYGEEKFSKQIARRIEAHR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +T ELVD+I+ P + RR+G A RVFQALRIAVNDEL E S+ +
Sbjct: 172 EQQPITTTLELVDIIKEGIPA-KARRKGG-HPAKRVFQALRIAVNDELSAFEDSIEQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
+ GR+ VI+FHSLEDR+ KQ F ++ E E R + + E + ++
Sbjct: 230 LVKVDGRISVITFHSLEDRLCKQVF--------QEYEKGPEVPRGL--PVVPEAYTPKL- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
K + ++PIT + E+ N R RSAKLRV +
Sbjct: 279 -----KRVNRKPITATEEDLDDNNRARSAKLRVAE 308
>gi|326803777|ref|YP_004321595.1| S-adenosyl-methyltransferase MraW [Aerococcus urinae
ACS-120-V-Col10a]
gi|326650961|gb|AEA01144.1| S-adenosyl-methyltransferase MraW [Aerococcus urinae
ACS-120-V-Col10a]
Length = 318
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/343 (35%), Positives = 173/343 (50%), Gaps = 39/343 (11%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+L E +D + S+VDCTLG GH+S ++ D D A+ A+
Sbjct: 7 HITVLLKETVDDLNVKED-GSYVDCTLGGGGHTSYLLSKLSAKGRLYAFDQDIQAINHAK 65
Query: 176 AHL-NSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGV---DAILMDLGMSSMQ 231
+++ GQ I + Q++E + + GV D IL DLG+SS Q
Sbjct: 66 ERFADAIAAGQ-------------LTLIHANFAQLEEQLAQRGVKQVDGILYDLGVSSPQ 112
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
+++ ERGFS D PLDMRMD +L A++I+N W ++ R+L+ YGEE + I
Sbjct: 113 LDDRERGFSYKQDAPLDMRMDQSQTLTAKEIVNDWSYVDLVRILKRYGEEKFAKAIARNI 172
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
R + + T ELV++I+ P R+ G A R FQA+RIAVNDEL +ESSL
Sbjct: 173 ENRRQKAAITRTSELVEIIKEAIPAPARRKGGH--PAKRSFQAIRIAVNDELGAIESSLS 230
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTF--LSIIDHNREDAEGNEEELRNIRDDNINET 409
+ GR+ ISF SLEDRIVK F S +D+ E +L +
Sbjct: 231 QALQLIKVEGRIAAISFQSLEDRIVKVMFKEASTVDNLPSQLPLLESQLPQAK------- 283
Query: 410 WIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+++ K+PI PS EE N R +SAKLRVI+++
Sbjct: 284 ----------FRLVNKKPIYPSQEELDKNSRAQSAKLRVIERV 316
>gi|417655641|ref|ZP_12305351.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21193]
gi|329728859|gb|EGG65280.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus 21193]
Length = 311
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/335 (36%), Positives = 174/335 (51%), Gaps = 30/335 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI VML E +D + ++DCTLG AGH+ ++ + + +D D +A+ A+
Sbjct: 4 HISVMLNETIDYLNVKEN-GVYIDCTLGGAGHALYLLNQLNDDGRLLAIDQDQTAIDNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L LH H NFR + +L D NI VD I DLG+SS Q++ P
Sbjct: 63 EVLKDHLHKVTFVH-------SNFRELTQILK--DLNI--EKVDGIYYDLGVSSPQLDIP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D LDMRMD L A +I+N+W + ++ YGEE + +I R
Sbjct: 112 ERGFSYHHDATLDMRMDQTQELTAYEIVNNWSYEALVKIFYRYGEEKFSKQIARRIEAHR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +T ELVD+I+ P + RR+G A RVFQALRIAVNDEL E S+ +
Sbjct: 172 EQQPITTTLELVDIIKEGIPA-KARRKGG-HPAKRVFQALRIAVNDELSAFEDSIEQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
+ GR+ VI+FHSLEDR+ KQ F ++ E E R + I E + ++
Sbjct: 230 LVKVDGRISVITFHSLEDRLCKQVF--------QEYEKGPEVPRGL--PVIPEAYTPKL- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
K + ++PIT + E+ N R RSAKLRV +
Sbjct: 279 -----KRVNRKPITATEEDLDDNNRARSAKLRVAE 308
>gi|315653716|ref|ZP_07906636.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Lactobacillus iners ATCC 55195]
gi|315489078|gb|EFU78720.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Lactobacillus iners ATCC 55195]
Length = 315
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/338 (36%), Positives = 175/338 (51%), Gaps = 28/338 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + ++ +VD T G GH+S +++ + L IG D D A+ A+
Sbjct: 5 HYSVLLHETIDNLNL-KSDGVYVDATFGGGGHASYLLKQLSNVHL-IGFDQDEYAIELAK 62
Query: 176 AHLNSLLHGQAHPHLK-THTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+ +L + P L H N + + LG ID G+D I DLG+SS Q +
Sbjct: 63 KSFSEVLKANSKPKLSLVHDNFGNLQQNLAKLGFID------GIDGIYYDLGVSSPQFDQ 116
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
PERGFS + LDMRMD L A I+N+W E+ +L +YG+E + IV
Sbjct: 117 PERGFSYRFNARLDMRMDQTKDLDAYKIVNTWSQKELSNILFKYGDEKYARQIAKNIVAK 176
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +T ELVD+I+ P RR G A + FQA+RIAVNDEL+ LE SL
Sbjct: 177 RAIKPITTTFELVDIIKEAIPAF-ARRTGG-HPAKKSFQAIRIAVNDELEVLEKSLLDAI 234
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
+ L PGGR+ VI+F SLED+IVK+ F D D ++ D++ T
Sbjct: 235 EILKPGGRICVITFQSLEDKIVKKIFKKYSD---VDIPRGMPQI----PDSLKPTL---- 283
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
KI++++PI + +E N R SAKLRV +K+
Sbjct: 284 ------KIISRKPIVATNKELEENNRSHSAKLRVAEKL 315
>gi|449935584|ref|ZP_21803458.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans 2ST1]
gi|450154932|ref|ZP_21877982.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans 21]
gi|449166398|gb|EMB69338.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans 2ST1]
gi|449237521|gb|EMC36360.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans 21]
Length = 316
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 124/339 (36%), Positives = 177/339 (52%), Gaps = 33/339 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+L E +D+ + +VD TLG AGHS ++ + D D A+ A+
Sbjct: 7 HITVLLHETIDMLDI-KPDGIYVDATLGGAGHSECLLSKLGKEGHLYCFDQDQKAIDNAK 65
Query: 176 AHLNSLLH-GQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
L + GQ +F K NFRH+KS L DE I +D I DLG+SS Q++
Sbjct: 66 IRLQQYVKTGQV-------SFIKDNFRHLKSRLA--DEGIYE--IDGICYDLGVSSPQLD 114
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
ERGFS D PLDMRM+ A L A D++N++ ++ R+ +YGE+ + KI
Sbjct: 115 ERERGFSYKKDAPLDMRMNQDAQLTAFDVVNTYDYRDLVRLFFKYGEDKFSKQIARKIES 174
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +T EL ++I+S P +++G A ++FQA+RI VNDEL E SL
Sbjct: 175 ARKEKLIETTAELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAAEESLTQA 232
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
D LA GR+ VI+FHSLEDR+ KQ F ++ D ++ +
Sbjct: 233 LDLLALNGRIAVITFHSLEDRLTKQLFKEVV----------------TLDVPKGLPFVPE 276
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+Q ++ ++PI P+A E N R SAKLRVIQKI
Sbjct: 277 NLQP-KFSLVNRKPILPNARELSENNRAHSAKLRVIQKI 314
>gi|433457821|ref|ZP_20415791.1| 16S rRNA m(4)C1402 methyltransferase [Arthrobacter crystallopoietes
BAB-32]
gi|432194271|gb|ELK50914.1| 16S rRNA m(4)C1402 methyltransferase [Arthrobacter crystallopoietes
BAB-32]
Length = 329
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/350 (36%), Positives = 183/350 (52%), Gaps = 44/350 (12%)
Query: 113 QSSHIPVMLGEVLDVFSSS--RTITS-----FVDCTLGAAGHSSAIIRAHPELKLHIGVD 165
+ HIPV+ +++ + + R I S VD TLG GHS A++ +L L +G+D
Sbjct: 8 EDRHIPVLRDRCINLLAPAIERAIESTGRAVVVDATLGMGGHSEALLTRFEQLHL-VGID 66
Query: 166 VDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG---VDAIL 222
D ALA A + L FA + +V +ID+ + G VD +L
Sbjct: 67 RDEQALALAGSRLAR--------------FAGRTDLVHAVYDEIDDVVRDLGFVAVDGVL 112
Query: 223 MDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEES 282
DLG+SS+Q++ +RGF+ D PLDMRMD A D++N++P ++ R++R++GEE
Sbjct: 113 FDLGVSSLQLDERDRGFAYSYDAPLDMRMDTSTGPTAADVVNTYPQEDLVRIIRKWGEEK 172
Query: 283 NWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDE 342
+ IVQAR + L +TGELVD+I+ V P R G A R FQALRI VN+E
Sbjct: 173 FAGRIAAGIVQAREKAPLSTTGELVDVIRGVVPAAAARTGG--HPAKRTFQALRIEVNEE 230
Query: 343 LKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIR 402
L LE ++ A + LA GGR+ V+S+HSLED+IVK F + G EL
Sbjct: 231 LDVLERAIPAALNVLALGGRVVVMSYHSLEDKIVKSFFAA--GSKSSAPVGFPVEL---- 284
Query: 403 DDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
E Q+ K LT+ P+A E N R SA+LR +++I
Sbjct: 285 -----EEHKAQL------KTLTRGTEVPTAAEIEENPRAASARLRAVERI 323
>gi|333904521|ref|YP_004478392.1| S-adenosyl-methyltransferase MraW [Streptococcus parauberis KCTC
11537]
gi|333119786|gb|AEF24720.1| S-adenosyl-methyltransferase MraW [Streptococcus parauberis KCTC
11537]
Length = 316
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 125/341 (36%), Positives = 179/341 (52%), Gaps = 37/341 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+L + +D+ + + +VD TLG AGHS+ ++ E D D A+ A+
Sbjct: 7 HITVLLNKTVDMLNV-KPDGIYVDATLGGAGHSAYLLSQLNENGHLYCFDQDQKAIDNAQ 65
Query: 176 AHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
L + GQ TF K NFR++KS L + + +D IL DLG+SS Q++
Sbjct: 66 VFLKPFIDKGQV-------TFIKDNFRNLKSRLASLG----VTEIDGILYDLGVSSPQLD 114
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
ERGFS D PLDMRMD +A L A ++N + ++ R+ YGE+ + KI Q
Sbjct: 115 ERERGFSYRQDAPLDMRMDTEAELTAYQVVNHYAFNDLVRIFFRYGEDKFSKQIARKIEQ 174
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +T EL +LI+S P +++G A ++FQA+RI VNDEL E S+
Sbjct: 175 AREIKPIETTAELAELIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAAEESIQQA 232
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTF--LSIIDHNREDAEGNEEELRNIRDDNINETWI 411
D LA GR+ VI+FHSLEDR+ KQ F S +D + N I
Sbjct: 233 MDILALDGRISVITFHSLEDRLTKQLFKEASTVDVPK------------------NIPII 274
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ +Q +++++PI PS EE N R SAKLRV +KI
Sbjct: 275 PEHLQP-KFDLVSRKPILPSLEELEANNRAHSAKLRVARKI 314
>gi|258645236|ref|ZP_05732705.1| S-adenosyl-methyltransferase MraW [Dialister invisus DSM 15470]
gi|260402586|gb|EEW96133.1| S-adenosyl-methyltransferase MraW [Dialister invisus DSM 15470]
Length = 310
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/351 (34%), Positives = 183/351 (52%), Gaps = 44/351 (12%)
Query: 103 YDYESIIQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHI 162
+ + +++Q + SH+ + T ++VDCTLG GHS A+ L I
Sbjct: 3 FSHTTVLQNEMVSHVL------------TNTNGTYVDCTLGGGGHSLALAEGLSNLGCII 50
Query: 163 GVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAIL 222
GVD D A+ A+ L K + NF +I +L EN + VD +
Sbjct: 51 GVDQDGEAIEAAKERLRG-------AQCKFISVRDNFSNINGIL---KENGIEK-VDGFI 99
Query: 223 MDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEES 282
DLG+SS Q+++ RGFS + +G LDMRMD + SL A D++N++ + ++R+YGEE
Sbjct: 100 FDLGVSSHQLDDGARGFSYMNNGKLDMRMDQRNSLTAYDVINTYTKEHLRNIIRDYGEER 159
Query: 283 NWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDE 342
+ + I +AR+R + +T ELV +I++ P RR G A R FQA+RI VN+E
Sbjct: 160 WASRIVDFIDRARMRRPISTTEELVHVIKAAIPSA-ARRDGP-HPAKRTFQAIRIEVNNE 217
Query: 343 LKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIR 402
L L ++ C + L GGRLGVI+FHSLEDRI+K TF R++
Sbjct: 218 LGILRKAMEDCINHLNKGGRLGVITFHSLEDRIIKNTF------------------RDMS 259
Query: 403 DDNINETWIRQIIQGWNGKILT-KRPITPSAEEERLNCRCRSAKLRVIQKI 452
D I + I I ++ + + I PS +E + N R RSA LRV++K+
Sbjct: 260 KDCICPSEIPICICNHRRQVRSVGKAIRPSPQEVKENPRARSAVLRVVEKV 310
>gi|384134940|ref|YP_005517654.1| S-adenosyl-methyltransferase MraW [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
gi|339289025|gb|AEJ43135.1| S-adenosyl-methyltransferase MraW [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
Length = 316
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/343 (35%), Positives = 182/343 (53%), Gaps = 36/343 (10%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
+ +H V+L E ++ R+ +VD TLG GH++ ++ + + D D +A+
Sbjct: 2 EFAHETVLLEEAVEALRP-RSGGVYVDATLGGGGHTARLLERSAPDGIVMAFDQDETAIE 60
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGV---DAILMDLGMSS 229
H SL F +K+ +++E++ GV D +L DLG+SS
Sbjct: 61 ----HAKSL----------KQKFPGRLTVVKANFAEMEEHLRALGVTAVDGVLFDLGVSS 106
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
Q + PERGFS +GPLDMRMD + L A +++N W + E+ R++REYGEE +
Sbjct: 107 PQFDVPERGFSYWHEGPLDMRMDRRQPLTAREVVNEWDERELARIIREYGEERFATAIAR 166
Query: 290 KIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESS 349
I +AR + + +T EL ++++ P RR G A R FQA+RIAVNDEL LE
Sbjct: 167 AIARARSKRPIETTTELAEIVKGAIPAA-ARRAG-PHPARRTFQAIRIAVNDELGVLERG 224
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINET 409
+ A F L PGGRL VI+FHSLEDR VK+ F + A+G E
Sbjct: 225 VEAAFRILRPGGRLSVITFHSLEDRAVKRLFQTW-------AQGC---------VCPPEF 268
Query: 410 WIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ Q + G+++ ++P+TPS+EE N R RSAKLR +K+
Sbjct: 269 PVCQCGRKPLGRMVLRKPVTPSSEELERNPRARSAKLRAFEKL 311
>gi|443293008|ref|ZP_21032102.1| Ribosomal RNA small subunit methyltransferase H [Micromonospora
lupini str. Lupac 08]
gi|385883807|emb|CCH20253.1| Ribosomal RNA small subunit methyltransferase H [Micromonospora
lupini str. Lupac 08]
Length = 374
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 181/347 (52%), Gaps = 38/347 (10%)
Query: 111 QQQSSHIPVMLGEVLDVFSSS-----RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVD 165
+ + +H+PV+L L++ + + RT+ VD TLG AGH+ A++ AHPE L IG+D
Sbjct: 31 ELRGTHVPVLLERCLELLAPALGRGGRTV--HVDATLGLAGHAEAVLEAHPETVL-IGLD 87
Query: 166 VDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDL 225
D ALA AR L + H + + VL E + G+D IL DL
Sbjct: 88 RDTEALAHARVRLARFAD-------RVHLEHAVYDELPEVL----ERLGYPGIDGILFDL 136
Query: 226 GMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWH 285
G+SS+Q++ P+RGF+ D PLDMRMD + AE+++N++ ++ RVLR YGEE
Sbjct: 137 GVSSLQLDAPDRGFAYAQDAPLDMRMDQTRGVTAEEVVNTYGHPDLARVLRVYGEEKFAG 196
Query: 286 LLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKT 345
+ + I++ R R + S+ L +L++ P RR G A R FQALRI VN EL
Sbjct: 197 RIASAIIRERERARITSSARLAELVRDSIPAP-ARRTGG-HPAKRTFQALRIEVNRELAA 254
Query: 346 LESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDN 405
LE++L + D L GGR+ V+S+HSLEDR+ K +++ D +R
Sbjct: 255 LETALPSALDALTVGGRMVVLSYHSLEDRLTK---VALAD--------------RVRSKG 297
Query: 406 INETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ + G ++L++ P E N R S +LR +++
Sbjct: 298 PIDLPVELPGSGPTFRLLSRGAELPGEAEVAANPRAASVRLRAAERL 344
>gi|418908890|ref|ZP_13462893.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIG149]
gi|377753928|gb|EHT77838.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIG149]
Length = 311
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 124/335 (37%), Positives = 173/335 (51%), Gaps = 30/335 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI VML E +D + ++DCTLG AGH+ ++ + I +D D +A+ A+
Sbjct: 4 HISVMLNETIDYLNVKEN-GVYIDCTLGGAGHALYLLNQLNDDGRLIAIDQDQTAIDNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L LH H NFR + +L D NI VD I DLG+SS Q++ P
Sbjct: 63 EVLKDHLHKVTFVH-------SNFRELTQILK--DLNI--EKVDGIYYDLGVSSPQLDIP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D LDMRMD L A +I+N+W + ++ YGEE + +I R
Sbjct: 112 ERGFSYHHDATLDMRMDQTQELTAYEIVNNWSYEALVKIFYRYGEEKFSKQIARRIEAHR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +T ELVD+I+ P + RR+G A RVFQALRIAVNDEL E S+ +
Sbjct: 172 EQQPITTTLELVDIIKEGIPA-KARRKGG-HPAKRVFQALRIAVNDELSAFEDSIEQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
GR+ VI+FHSLEDR+ KQ F ++ E E R + I E + ++
Sbjct: 230 LAKVDGRISVITFHSLEDRLCKQVF--------QEYEKGPEVPRGL--PVIPEAYTPKL- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
K + ++PIT + E+ N R RSAKLRV +
Sbjct: 279 -----KRVNRKPITATEEDLDDNNRARSAKLRVAE 308
>gi|427735886|ref|YP_007055430.1| S-adenosyl-methyltransferase MraW [Rivularia sp. PCC 7116]
gi|427370927|gb|AFY54883.1| S-adenosyl-methyltransferase MraW [Rivularia sp. PCC 7116]
Length = 349
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/338 (35%), Positives = 170/338 (50%), Gaps = 57/338 (16%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
SHIPV+ E++ + R ++D T+G GHS I+ A + ++ +D D AL A
Sbjct: 62 SHIPVLGKEIITGLTI-RENGHYLDTTVGGGGHSRLILSAATDTQI-TAIDQDEDALIAA 119
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+ +L F + ++S + D + D I+ DLG+SS ++N
Sbjct: 120 KNNLAE--------------FENRVKFVRSNFAEYD--FPANTFDGIIADLGVSSYHLDN 163
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
PERGFS + LDMRMD + SL A +I+N W + ++ + +YGEE + +IV+
Sbjct: 164 PERGFSFRNEAELDMRMDRRQSLTAAEIINHWGEVKLADIFFKYGEERLSRRIAKRIVEN 223
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R ++T EL + I P R R G I ATRVFQALRIAVNDELK LE L
Sbjct: 224 R---PFNTTTELAEAISYCVP--RKYRYGRIHPATRVFQALRIAVNDELKALEILLEKAP 278
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
L GG++ +ISFHSLEDRIVK TF +D +
Sbjct: 279 SALVEGGKIAIISFHSLEDRIVKHTF---------------------KDSS--------- 308
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ K+LTK+PIT EE N R RSAKLR+ + +
Sbjct: 309 ----SLKVLTKKPITAQEEEIANNPRARSAKLRIAEAV 342
>gi|335357074|ref|ZP_08548944.1| 16S rRNA m(4)C1402 methyltranserfase [Lactobacillus animalis KCTC
3501]
Length = 315
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 125/339 (36%), Positives = 181/339 (53%), Gaps = 30/339 (8%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
+H+ V+L E ++ + + +VDCTLG GH+S I+ + D D +A+
Sbjct: 5 NHVTVLLEEAVEQLNI-KPDGVYVDCTLGGGGHTSLILSKLSDKGRLFSFDQDQTAIDYN 63
Query: 175 RAHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
L + L K TF K NFR++K L + + I + VD IL DLG+SS Q +
Sbjct: 64 TKRLQNELAS------KKLTFIKSNFRNLKECLAE--QQITK--VDGILYDLGVSSPQFD 113
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
ERGFS D LDMRMD +L A+ ++N W E+ R+ YGEE + +I
Sbjct: 114 VGERGFSYQHDATLDMRMDQSQTLTAKTVINDWSYQELVRIFMRYGEEKFAKSIARRIEA 173
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + + +TG+LV+LI++ P + RR+G A +VFQA+RIAVNDEL LE SL
Sbjct: 174 ARKQAPIETTGQLVELIKAGIPA-KARRKGG-HPAKKVFQAVRIAVNDELGALEESLDQA 231
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
F+ L GGR+ VI+F SLEDR+VK F +E ++ + I
Sbjct: 232 FEVLDVGGRISVITFQSLEDRLVKTMF---------------KEKASLPELPAGLPIIPA 276
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++ K++T++PI PS E N R SAKLR I+K+
Sbjct: 277 ELEP-EFKLITRKPILPSDAELEANHRAHSAKLRAIEKL 314
>gi|309776027|ref|ZP_07671019.1| S-adenosyl-methyltransferase MraW [Erysipelotrichaceae bacterium
3_1_53]
gi|308916309|gb|EFP62057.1| S-adenosyl-methyltransferase MraW [Erysipelotrichaceae bacterium
3_1_53]
Length = 311
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 126/337 (37%), Positives = 178/337 (52%), Gaps = 30/337 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + R+ +VD TLG GHS+ I+ P+ L+ D D SA+ ++R
Sbjct: 4 HYSVLLQESIDNLAI-RSDGIYVDGTLGRGGHSAEILARIPQGHLY-AFDRDASAIEESR 61
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L + H NF ++KS L E +G+D +++DLG+SS Q +
Sbjct: 62 ERLTRIGSNVTLIH-------SNFSNVKSEL----EARGVTGIDGMVLDLGVSSPQFDEA 110
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
+RGFS D PLDMRMD L A ++N W E+ R+ ++GEES + KI +AR
Sbjct: 111 QRGFSYRFDAPLDMRMDQSQQLSAYQVVNEWEYQELVRIFFQFGEESFAKQIARKIEKAR 170
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +T ELVD+I+S P ++G A +VFQA+RIAVNDEL L+ L
Sbjct: 171 ETKPIETTLELVDVIKSALPAKVLNKKG--HPAKKVFQAIRIAVNDELGELQMVLRDALA 228
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L GGRL VISF SLEDRIVK TF++ + D I ++ E R
Sbjct: 229 LLHVGGRLCVISFQSLEDRIVKDTFVACSKPKQYDKR------LPILPQDMEEAPYR--- 279
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++ K+PIT + +E R N R SAKLR I++I
Sbjct: 280 ------LVNKKPITATEDELRENMRSHSAKLRCIERI 310
>gi|339021865|ref|ZP_08645850.1| methytransferase MraW [Acetobacter tropicalis NBRC 101654]
gi|338751138|dbj|GAA09154.1| methytransferase MraW [Acetobacter tropicalis NBRC 101654]
Length = 338
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 120/345 (34%), Positives = 170/345 (49%), Gaps = 27/345 (7%)
Query: 107 SIIQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDV 166
S+ S HIPVML EVL+ + + +DCT G G+++AI+ A I D
Sbjct: 7 SLPTSVSSGHIPVMLTEVLEALKPADG-NAILDCTFGGGGYTTAILNAADCTVWAI--DR 63
Query: 167 DPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLG 226
DP A+ + + P L H +F ++ + Q + D I++DLG
Sbjct: 64 DPDAIVRGNILAKAFAEASGKPRL--HMLHGSFGTMQDLTQQAEA----PAFDGIVLDLG 117
Query: 227 MSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHL 286
+SS Q++ ERGFS DGPLDMRM + A D++N+ +AE+ + YGEE +
Sbjct: 118 VSSFQLDEAERGFSFKQDGPLDMRM-ARTGRTAADVVNTASEAELADIFHFYGEERHARR 176
Query: 287 LQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTL 346
+ IV R+ +T +L LI+ V P R I +ATR FQ LRIAVNDEL +
Sbjct: 177 VARAIVADRVETPFTTTAQLAGLIRRVVPSDRS----GIDSATRSFQGLRIAVNDELGEI 232
Query: 347 ESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNI 406
E L D LAPGGRL V+SFHSLEDRI K+ + ++ + + DD
Sbjct: 233 ERGLEQALDLLAPGGRLVVVSFHSLEDRIAKRVLGNATGKSQSFSRYDPRAAMTKADD-- 290
Query: 407 NETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
++ LT +P+ P E N R RSA+LR + K
Sbjct: 291 -APFV----------ALTGKPVRPGDAECSANPRARSARLRAVAK 324
>gi|291440170|ref|ZP_06579560.1| S-adenosylmethionine-dependent methyltransferase [Streptomyces
ghanaensis ATCC 14672]
gi|291343065|gb|EFE70021.1| S-adenosylmethionine-dependent methyltransferase [Streptomyces
ghanaensis ATCC 14672]
Length = 318
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/273 (39%), Positives = 150/273 (54%), Gaps = 22/273 (8%)
Query: 113 QSSHIPVMLGEVLDVFSSS--RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSA 170
QS H+PVML LD+ + + R VDCTLG GHS A++R PE +L + +D D A
Sbjct: 3 QSRHVPVMLQRCLDLLAPALERPGAVVVDCTLGLGGHSEALLRRFPEARL-VALDRDKEA 61
Query: 171 LAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGV---DAILMDLGM 227
L L G+ + F + + +V ++ + + R GV +L DLG+
Sbjct: 62 LR---------LSGE-----RLAPFGERATLVHAVYDELPDVLARLGVPRVQGVLFDLGV 107
Query: 228 SSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLL 287
SSMQ++ +RGF+ D PLDMRMD A + A ++LN++P E+ R+LR YGEE +
Sbjct: 108 SSMQLDEADRGFAYAQDAPLDMRMDQTAGVSAAEVLNTYPPGELVRILRAYGEEKQAKRI 167
Query: 288 QNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLE 347
IV+ R + + LV+LI+ P R G A R FQALRI VN EL LE
Sbjct: 168 VAAIVREREKEPFTRSARLVELIRDALPQAAKRTGG--NPAKRTFQALRIEVNGELSVLE 225
Query: 348 SSLHACFDCLAPGGRLGVISFHSLEDRIVKQTF 380
++ A L GR+ V+S+HSLEDR+VKQ F
Sbjct: 226 RAIPAAVKALDVDGRIAVLSYHSLEDRLVKQVF 258
>gi|302533959|ref|ZP_07286301.1| S-adenosyl-methyltransferase MraW [Streptomyces sp. C]
gi|302442854|gb|EFL14670.1| S-adenosyl-methyltransferase MraW [Streptomyces sp. C]
Length = 319
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/270 (39%), Positives = 150/270 (55%), Gaps = 16/270 (5%)
Query: 113 QSSHIPVMLGEVLDVFSSS--RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSA 170
+S H+PVML LD+ + + R VDCTLG GHS A++ PE +L IG+D D A
Sbjct: 4 ESRHVPVMLQRCLDLLAPALERPGAVVVDCTLGLGGHSEALLTRFPEARL-IGLDRDKEA 62
Query: 171 LAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSM 230
L + L H I + L ++ +N+ V IL DLG+SSM
Sbjct: 63 LRLSGERLAPFGDRATLVH-----------AIYADLAEVLDNLGLPAVQGILFDLGVSSM 111
Query: 231 QVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNK 290
Q++ +RGF+ D PLDMRMD + A ++LN++ E+ R+LR+YGEE + +
Sbjct: 112 QLDEADRGFAYAQDAPLDMRMDQTTGVSAAEVLNTYAPGELVRILRQYGEEKQAKRIVSA 171
Query: 291 IVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSL 350
IV+ R + ++ LV+LI+ P R G A R FQALRI VN EL LE ++
Sbjct: 172 IVREREKEPFSNSARLVELIRDALPQAAKRTGG--NPAKRTFQALRIEVNGELSGLERAI 229
Query: 351 HACFDCLAPGGRLGVISFHSLEDRIVKQTF 380
A D +A GGR+ V+S+HSLEDR+VKQ F
Sbjct: 230 PAAVDRIAVGGRIAVLSYHSLEDRLVKQVF 259
>gi|440694340|ref|ZP_20876967.1| putative S-adenosyl-L-methionine-dependent methyltransferase MraW
[Streptomyces turgidiscabies Car8]
gi|440283667|gb|ELP70896.1| putative S-adenosyl-L-methionine-dependent methyltransferase MraW
[Streptomyces turgidiscabies Car8]
Length = 318
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/346 (35%), Positives = 177/346 (51%), Gaps = 43/346 (12%)
Query: 114 SSHIPVMLGEVLDVFSSS--RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
S H+PVML LD+ + + R VDCTLG GHS A++ PE +L IG+D D AL
Sbjct: 4 SRHVPVMLQRCLDMLAPALERPGAVVVDCTLGLGGHSEALLARFPEARL-IGLDRDKEAL 62
Query: 172 AKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGV---DAILMDLGMS 228
L G+ + F + + +V ++ + + R + D IL DLG+S
Sbjct: 63 R---------LSGE-----RLAPFGERADLVHAVYDELPDVLDRLSLPKADGILFDLGVS 108
Query: 229 SMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQ 288
SMQ++ +RGF+ D PLDMRMD + A ++LN++P E+ R+LR YGEE +
Sbjct: 109 SMQLDEADRGFAYAQDAPLDMRMDQTTGISAAEVLNTYPPGELVRILRAYGEEKQAKRIV 168
Query: 289 NKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLES 348
+ +V+ R + ++ LV+LI+ P R G A R FQALRI VN EL LE
Sbjct: 169 SAVVRERDKEPFSNSARLVELIRDSLPQAAKRTGG--NPAKRTFQALRIEVNGELTVLER 226
Query: 349 SLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE 408
++ A LA GGR+ V+S+HSLEDR+VKQ F A G N
Sbjct: 227 AIPAAVKALAVGGRIAVLSYHSLEDRLVKQVF----------AAGAA---------NTAP 267
Query: 409 TWIRQIIQGWNG--KILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ + + + K+LT+ P+ EE N R A+LR Q+I
Sbjct: 268 PGLPVVPERYQPRLKLLTRGAELPTEEEIAENRRAAPARLRGAQRI 313
>gi|365840192|ref|ZP_09381393.1| S-adenosyl-methyltransferase MraW [Anaeroglobus geminatus F0357]
gi|364562247|gb|EHM40115.1| S-adenosyl-methyltransferase MraW [Anaeroglobus geminatus F0357]
Length = 310
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 125/343 (36%), Positives = 173/343 (50%), Gaps = 43/343 (12%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+ E++ + T +VDCTLG GHS A+ IG+D D +A+A A
Sbjct: 5 HVSVLQAEIVHAVAGDPT-GIYVDCTLGGGGHSRALAELLAPTGTIIGLDRDKNAVAAAS 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
+ + +NF+ + +VL ++D I R +D ++ DLG+SS Q++ P
Sbjct: 64 ERMKDAA-------CRFIPVQRNFKDMGAVLDELD--IER--IDGVMFDLGVSSYQLDTP 112
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS DGPLDMRMD +A A D++N++ +A + RV+R+YGEE + IV AR
Sbjct: 113 ERGFSYQHDGPLDMRMDTEAKRSAYDVVNTYDEAGLYRVIRDYGEERWARRIARFIVAAR 172
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
L TGELV +I+ P R+ A R FQA+RI VN+EL L ++
Sbjct: 173 REKPLERTGELVRIIKQAVPA--AARKDGPHPAKRTFQAIRIEVNEELSILRNAFETAAG 230
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI---- 411
L GG +G+I+FHSLEDRI KQT L+ + D I I
Sbjct: 231 RLKRGGHMGIITFHSLEDRIAKQT------------------LKRLATDCICPPGIPVCT 272
Query: 412 --RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
Q + GK I PSA E N R RSAKLRV +I
Sbjct: 273 CNHQAVLKIEGK-----GIVPSAAELAANPRARSAKLRVGTRI 310
>gi|373486901|ref|ZP_09577572.1| S-adenosyl-methyltransferase MraW [Holophaga foetida DSM 6591]
gi|372010854|gb|EHP11457.1| S-adenosyl-methyltransferase MraW [Holophaga foetida DSM 6591]
Length = 327
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/270 (41%), Positives = 150/270 (55%), Gaps = 17/270 (6%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+PV+L EVL+ +D TLG GH+ AI+ ++GVD DP A A+
Sbjct: 7 HVPVLLHEVLESLPVPPG-GRVLDLTLGLGGHAEAILARCDADTRYLGVDRDPFARELAQ 65
Query: 176 AHLNS-----LLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSM 230
A L S +L G AH + + +R +++ +G DAILMDLG+S++
Sbjct: 66 ARLGSDARFSILAG-AHEEIWEDPLFEAWRSLQAP----------NGFDAILMDLGVSNL 114
Query: 231 QVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNK 290
+ P RGFS + +GPLDMRMDP+ A ++ D + + EYGEE +
Sbjct: 115 HLKTPARGFSFMEEGPLDMRMDPEHGETALQWISEQSDETLANAIYEYGEERASRPIARS 174
Query: 291 IVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSL 350
I++A G LH+T +L I V P +R+ I ATR FQA+RIAVN EL LE++L
Sbjct: 175 ILRAFNEGRLHTTLDLAQAIYQVLPREIAKRKKQIDPATRTFQAIRIAVNGELSRLEATL 234
Query: 351 HACFDCLAPGGRLGVISFHSLEDRIVKQTF 380
+ L PGGRLGVISFHSLEDRIVK TF
Sbjct: 235 EQAVEALVPGGRLGVISFHSLEDRIVKHTF 264
>gi|291550007|emb|CBL26269.1| S-adenosyl-methyltransferase MraW [Ruminococcus torques L2-14]
Length = 311
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/338 (35%), Positives = 174/338 (51%), Gaps = 34/338 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D + + +VD TLG GH+ + E IG+D D A+ A
Sbjct: 5 HVSVLLHETVDGLNV-KPDGIYVDATLGGGGHAYEVCTKLGEQGRLIGIDQDADAIKAAG 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L G+ K N+ +K L +I + VD I +DLG+SS Q++
Sbjct: 64 KRLEGF--GE-----KVTIIRSNYCDMKPRLHEIGID----KVDGITVDLGVSSYQLDTA 112
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD + + A DI+N + ++E+ RV+R+YGE+ + IV R
Sbjct: 113 ERGFSYRVDAPLDMRMDQRQKMTARDIVNDYSESELYRVIRDYGEDRFAKNIAKHIVAER 172
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+G + +TG+L ++I P + G + R FQALRI +N EL L +L D
Sbjct: 173 AKGPIETTGQLNEIISHAIPMKIQKTSGH--PSKRTFQALRIELNHELDVLRDTLDDMID 230
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L PGGRL +I+FHSLEDRIVK +F R + I + +
Sbjct: 231 LLNPGGRLCIITFHSLEDRIVKSSF------------------RKNENPCICPSHFPVCV 272
Query: 416 QG--WNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
G GK++T++PI PS EE +N R +SAKLR+ ++
Sbjct: 273 CGNVSKGKVITRKPILPSEEELTVNSRSKSAKLRIFER 310
>gi|197116881|ref|YP_002137308.1| S-adenosyl-methyltransferase MraW [Geobacter bemidjiensis Bem]
gi|263447558|sp|B5EBP3.1|RSMH_GEOBB RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|197086241|gb|ACH37512.1| 16S rRNA (N4-methyl-C1402)-methyltransferase [Geobacter
bemidjiensis Bem]
Length = 312
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 133/337 (39%), Positives = 181/337 (53%), Gaps = 30/337 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+ EVL S R+ +VD TLG AGH+ I+ A IG D D A+A AR
Sbjct: 6 HISVLPDEVLQALSP-RSGGVYVDGTLGGAGHAGLILTASAPDGQLIGFDRDEEAIAVAR 64
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L + G + +NF I L +I + G+D ++DLG+SS Q++
Sbjct: 65 ERLQ-VFGG------RVRIIHRNFAGIAQALAEIGVD----GIDGFVLDLGVSSHQLDRD 113
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS + D PLDMRMD + A D++N+ P+ E+ R++ EYGEE + + IV+AR
Sbjct: 114 ERGFSFMHDAPLDMRMDRSSGQSAADLVNTLPEGELYRIISEYGEERWAKRVASFIVKAR 173
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +T +LVD+I+ P + + + + ATR FQALRIAVN+ELK+LE L
Sbjct: 174 DERPIETTLQLVDVIKGSIP--KAKWEERLHPATRTFQALRIAVNEELKSLEEGLEGLLS 231
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L GGR VISFHSLEDRIVK+ F R A G E I
Sbjct: 232 LLKQGGRGAVISFHSLEDRIVKEGF-------RAAATGC---------TCPKELPICICG 275
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ K++T++PIT E N R RSAKLRV++KI
Sbjct: 276 RVPRFKLVTRKPITAGEAEVAANPRSRSAKLRVVEKI 312
>gi|410458283|ref|ZP_11312043.1| 16S rRNA m(4)C1402 methyltransferase [Bacillus azotoformans LMG
9581]
gi|409931465|gb|EKN68447.1| 16S rRNA m(4)C1402 methyltransferase [Bacillus azotoformans LMG
9581]
Length = 310
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/315 (39%), Positives = 161/315 (51%), Gaps = 29/315 (9%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
+VDCTLG AGHS I+ + D D A+A A L + +
Sbjct: 24 YVDCTLGGAGHSELILSKLSKSGRLYAFDQDEMAIAHAAEKLAAYKD-------QVVLIK 76
Query: 197 KNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQAS 256
NFR++K L + GVD +L DLG+SS Q++ ERGFS D PLDMRMD A
Sbjct: 77 SNFRYLKEELQERG----VEGVDGVLFDLGVSSPQLDIAERGFSYHQDAPLDMRMDQTAP 132
Query: 257 LKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPG 316
+ A D++N W ++ + YGEE + KI R + +TGELV+LI+ P
Sbjct: 133 ISAYDVVNHWSYNDLVGIFFRYGEEKFSKQIARKIEAFRSVKPIETTGELVELIKEGIPA 192
Query: 317 MRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIV 376
RR G A RVFQA+RIAVNDELK E ++ PGGR+ VI+FHSLEDRI
Sbjct: 193 -PARRAGG-HPAKRVFQAIRIAVNDELKVFEEAIEDAISITKPGGRIAVITFHSLEDRIC 250
Query: 377 KQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEER 436
K TF S E G I E + ++ K++T++PI PS EE
Sbjct: 251 KTTF-SKWSKGPELPHGL---------PIIPEEYKAKL------KLITRKPILPSEEEME 294
Query: 437 LNCRCRSAKLRVIQK 451
N R RSAKLRV ++
Sbjct: 295 QNKRARSAKLRVAER 309
>gi|83312939|ref|YP_423203.1| S-adenosyl-methyltransferase MraW [Magnetospirillum magneticum
AMB-1]
gi|123540765|sp|Q2W0I1.1|RSMH_MAGSA RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|82947780|dbj|BAE52644.1| S-adenosyl-methyltransferase mraW [Magnetospirillum magneticum
AMB-1]
Length = 318
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/332 (35%), Positives = 170/332 (51%), Gaps = 41/332 (12%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHI-GVDVDPSALAKA 174
HIPV+L EV+ + R ++D T GA G+S AI+ A + +D DP+A+A+
Sbjct: 6 HIPVLLAEVIAALAP-RNDGVYLDGTFGAGGYSRAILAAS---ACRVWAIDRDPTAVARG 61
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGV---DAILMDLGMSSMQ 231
+ L A F I+ G +D + + GV D I +D+G+SSMQ
Sbjct: 62 K--------------LLEEGSAGRFSMIEGRFGDMDSLLRQQGVNQVDGIALDIGVSSMQ 107
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ PERGFS DGPLDMRM+ + A D++N P+ E+ ++ YGEE + I
Sbjct: 108 IDQPERGFSFAKDGPLDMRMETKGP-SAADMVNDTPETELANIIYRYGEERLSRRVAKAI 166
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
V+AR TGEL ++++ V P R I ATR FQALRIAVNDEL LE L
Sbjct: 167 VEARRLKRFERTGELAEVVRKVVP----RSGDGIDPATRTFQALRIAVNDELGELERGLE 222
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
A LAPGG L V++FHSLEDR+VK S + +A + + ++
Sbjct: 223 AAERLLAPGGHLAVVTFHSLEDRVVK----SFLKARSGEAARPSRHVPQAQGSGPAASF- 277
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRS 443
+L+++ I P+ +E R N R RS
Sbjct: 278 ---------ALLSRKAIGPAPDEARANPRARS 300
>gi|386346659|ref|YP_006044908.1| Ribosomal RNA small subunit methyltransferase H [Spirochaeta
thermophila DSM 6578]
gi|339411626|gb|AEJ61191.1| Ribosomal RNA small subunit methyltransferase H [Spirochaeta
thermophila DSM 6578]
Length = 324
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/338 (36%), Positives = 173/338 (51%), Gaps = 36/338 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+PV+ EV S + VD TLG GHS A++ +HP ++L +GVD DP L++A
Sbjct: 8 HVPVLREEVGAFLSVRDGLV--VDATLGEGGHSEALLESHPGIRL-LGVDADPIMLSRAG 64
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDA-ILMDLGMSSMQVNN 234
L+ F R ++ ++ E+ ILMDLG+SS +
Sbjct: 65 ERLSR--------------FGDRVRLVQGWFDEVLESFPAEDRPVGILMDLGISSYHLEK 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
RGFS L PLDMR+ P +KA D++N++ + E+ V +GEE + IV
Sbjct: 111 SGRGFSFLRREPLDMRLSPYLPMKASDVVNTYSETELVDVFSRFGEEPFSRRIARAIVSE 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + + ++ L +++ P R+G I ATRVFQALRI VN EL+ +E ++ A
Sbjct: 171 RRKMPITTSDHLAEVVMKAVPP--KARRGRIHPATRVFQALRIVVNKELERVERAVRAGV 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
LAPGGR+ VISFHSLEDRIVK+ F E E R
Sbjct: 229 RLLAPGGRMAVISFHSLEDRIVKRLFRFYASACTCPPE---------------EPICRCG 273
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
QG ++LTK+P+ P EE R N RSA+LRV++K+
Sbjct: 274 GQGIV-EVLTKKPVRPGEEEVRTNPASRSARLRVLEKV 310
>gi|406905951|gb|EKD47261.1| Ribosomal RNA small subunit methyltransferase H [uncultured
bacterium]
Length = 284
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 127/338 (37%), Positives = 176/338 (52%), Gaps = 59/338 (17%)
Query: 116 HIPVMLGEVLDVFS-SSRTITSFVDCTLGAAGHSSAII-RAHPELKLHIGVDVDPSALAK 173
HIPV+L EVL+ SS I VD TLG GH+ I+ R P K+ IG D D +
Sbjct: 3 HIPVLLKEVLEGLDLSSGNIV--VDATLGLGGHTRQILDRIGPAGKV-IGFDKDERNIKL 59
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
A+ +LL + +FA HI + ++ VDA+L DLG SS+ V+
Sbjct: 60 AK---ENLLEVKDRVEFVYSSFA----HIG--------DYVKEPVDAVLFDLGFSSVHVD 104
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
+PERGFS + DGPLDMR D +L AE I+N W ++ + R+ GEE + I
Sbjct: 105 DPERGFSFMYDGPLDMRYDQDQALSAETIVNGWSKEDLIELFRKMGEEEYAPQIARAIFD 164
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + + T +LV++I++V R G AT+VFQALRIAVNDEL +E L +
Sbjct: 165 ARRKERITRTLQLVEVIETVV-----HRHGKQHPATKVFQALRIAVNDELGEVEQGLESA 219
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
L GR+ VI+FHSLEDR+VK+ F + +EL
Sbjct: 220 IKVLKTDGRIAVITFHSLEDRLVKRFFKA------------SDEL--------------- 252
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
++LTK+PI S+ E ++N R RSAKLR+ +K
Sbjct: 253 -------EVLTKKPIKTSSNEIKINPRARSAKLRIARK 283
>gi|418900586|ref|ZP_13454643.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIG1214]
gi|377703054|gb|EHT27370.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIG1214]
Length = 311
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/335 (36%), Positives = 173/335 (51%), Gaps = 30/335 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI VML E +D + ++DCTLG GH+ ++ + I +D D +A+ A+
Sbjct: 4 HISVMLNETIDYLNVKEN-GVYIDCTLGGVGHALYLLNQLNDDGRLIAIDQDQTAIDNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L LH H NFR + +L D NI VD I DLG+SS Q++ P
Sbjct: 63 EVLKDHLHKVTFVH-------SNFRELTQILK--DLNI--EKVDGIYYDLGVSSPQLDIP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D LDMRMD L A +I+N+W + ++ YGEE + +I R
Sbjct: 112 ERGFSYHHDATLDMRMDQTQELTAYEIVNNWSYEALVKIFYRYGEEKFSKQIARRIEAHR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +T ELVD+I+ P + RR+G A RVFQALRIAVNDEL E S+ +
Sbjct: 172 EQQPITTTLELVDIIKEGIPA-KARRKGG-HPAKRVFQALRIAVNDELSAFEDSIEQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
+ GR+ VI+FHSLEDR+ KQ F ++ E E R + I E + ++
Sbjct: 230 LVKVDGRISVITFHSLEDRLCKQVF--------QEYEKGPEVPRGL--PVIPEAYTPKL- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
K + ++PIT + E+ N R RSAKLRV +
Sbjct: 279 -----KRVNRKPITATEEDLDDNNRARSAKLRVAE 308
>gi|322386906|ref|ZP_08060530.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Streptococcus cristatus ATCC 51100]
gi|417922167|ref|ZP_12565656.1| S-adenosyl-methyltransferase MraW [Streptococcus cristatus ATCC
51100]
gi|321269188|gb|EFX52124.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Streptococcus cristatus ATCC 51100]
gi|342833055|gb|EGU67343.1| S-adenosyl-methyltransferase MraW [Streptococcus cristatus ATCC
51100]
Length = 316
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/342 (35%), Positives = 184/342 (53%), Gaps = 39/342 (11%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+L E +D R+ +VD TLG AGHS ++ + D D +A+ A+
Sbjct: 7 HITVLLHETIDQLDV-RSDGIYVDATLGGAGHSEYLLSKLGDKGHLYAFDQDQTAIDNAK 65
Query: 176 AHLNSLLHGQAHPHLK--THTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
L P+++ TF K NFR++K+ L ++ +D I DLG+SS Q+
Sbjct: 66 KRLA--------PYIERGMVTFIKDNFRNLKTRLNEVG----VEKIDGICYDLGVSSPQL 113
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ ERGFS D PLDMRM+ +A+L A ++N +P ++ R+ +YGE+ + KI
Sbjct: 114 DERERGFSYKQDAPLDMRMNQEAALTAYQVVNQYPYNDLVRIFFKYGEDKFSKQIARKIE 173
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
QAR + +T EL ++I+S P +++G A ++FQA+RI VNDEL + S+
Sbjct: 174 QAREIKPIETTTELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADESIQQ 231
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTF--LSIIDHNREDAEGNEEELRNIRDDNINETW 410
D LA GGR+ VI+FHSLEDR+ KQ F S +D + L I DD
Sbjct: 232 AIDLLAVGGRISVITFHSLEDRLTKQLFKEASTVDVPK--------GLPFIPDD------ 277
Query: 411 IRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+Q ++++++PI PS EE N R SAKLRV +K+
Sbjct: 278 ----LQP-KLELVSRKPILPSKEELEANNRAHSAKLRVARKV 314
>gi|145220562|ref|YP_001131271.1| S-adenosyl-methyltransferase MraW [Chlorobium phaeovibrioides DSM
265]
gi|262824996|sp|A4SH10.1|RSMH_PROVI RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|145206726|gb|ABP37769.1| S-adenosyl-methyltransferase MraW [Chlorobium phaeovibrioides DSM
265]
Length = 327
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 126/346 (36%), Positives = 180/346 (52%), Gaps = 40/346 (11%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAII-----RAHPELKLHIGVDVDPSA 170
H PV+ E + + R ++D TLG GHS AI+ E L +G+D D A
Sbjct: 9 HEPVLAPESVSMLV--RGPGLYLDGTLGGGGHSLAILCELERSGWLEGSLLLGIDQDDEA 66
Query: 171 LAKARAHLNSLLHGQAHPHLKTHTFA--KNFRHIKSVLG-QIDENILRSGVDAILMDLGM 227
L +A G+ + H A NF +I ++ + + IL+DLG+
Sbjct: 67 LQEA---------GERLADYREHAVALKGNFGNIAALSAREAGSRGMEPQASGILLDLGV 117
Query: 228 SSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLL 287
SS Q++ P RGFS + GPLDMRMD A+ A DILN+ P+AE+ + YGEE ++
Sbjct: 118 SSHQLDVPLRGFSYMQPGPLDMRMDSGATGTAADILNTAPEAELASIFFRYGEEPLSRVI 177
Query: 288 QNKIVQARL-RGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTL 346
+ R+ +G H+T EL DL++SV G R+ +K+ +RVFQALRIAVN EL+ L
Sbjct: 178 ARAVTTRRVEKGPFHTTDELADLVRSVVFG----RERVMKSLSRVFQALRIAVNQELEVL 233
Query: 347 ESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNI 406
E L L PGGR+ VIS+HSLEDR+VK+ F S+ D
Sbjct: 234 ERVLGDGVMLLKPGGRMAVISYHSLEDRMVKRFFSSL----------------TTADWGP 277
Query: 407 NETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+R+ ++ +T +P+ AEE N R RSAK+RVI+K+
Sbjct: 278 KGVGLREPVRPAAAIAVTGKPVRAGAEEVARNPRARSAKMRVIEKM 323
>gi|426245218|ref|XP_004016410.1| PREDICTED: probable methyltransferase-like protein 15 [Ovis aries]
Length = 407
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/355 (34%), Positives = 185/355 (52%), Gaps = 37/355 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HIPVM+ EV+ + + F+D T G+ GH+ AI++ P++ L+ +D DP+A A A
Sbjct: 72 HIPVMVDEVVHCLAPQKG-QVFLDMTFGSGGHTRAILQKEPDITLY-ALDRDPTAYAIAE 129
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGV-----DAILMDLGMSSM 230
L+ L + K R I Q + ++++GV D +L+DLG SSM
Sbjct: 130 -QLSEL-------------YPKQIRAILGQFSQAEALLMKAGVQPGTLDGVLLDLGCSSM 175
Query: 231 QVNNPERGFSVLGDGPLDMRMD----PQASLKAEDILNSWPDAEVGRVLREYGEESNWHL 286
Q++ PERGFS+ DGPLDMRMD P A D++N+ + +LR YGEE +
Sbjct: 176 QLDTPERGFSLRKDGPLDMRMDGDRYPDMP-TAADVVNALDQQALASILRAYGEEKHAKK 234
Query: 287 LQNKIVQARLRGGLHSTGELVDLIQSVTP--GMRGRR---QGWIKTATRVFQALRIAVND 341
+ + IVQAR + T +L ++ P + R+ Q AT+ FQA RI VN+
Sbjct: 235 IASAIVQARALYPITRTQQLASIVAGAFPPSALYARKDVLQRSTHIATKTFQAFRIFVNN 294
Query: 342 ELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNI 401
EL L + L L PGG L +SFHSLEDRI+K+ L I R + ++ ++
Sbjct: 295 ELNELYTGLKTAQKFLRPGGHLVALSFHSLEDRIIKRFLLGISMTERFNLSARQKVIQKS 354
Query: 402 RDDNINE----TWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ D+ E R+ W K++ K+ +TP ++ + N R RSAKLR K+
Sbjct: 355 QLDSYQENKEGVSTRKAPLMW--KLIHKKVLTPEDQDVQDNPRGRSAKLRAAIKL 407
>gi|262831458|sp|Q1J5F8.2|RSMH_STRPF RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
Length = 316
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 120/341 (35%), Positives = 186/341 (54%), Gaps = 37/341 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG +GHS+ ++ E D D A+ A+
Sbjct: 7 HVTVLLHETVDMLDI-KPNGIYVDATLGGSGHSAYLLSKLSEQGHLYCFDQDQKAIDNAQ 65
Query: 176 AHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQ--IDENILRSGVDAILMDLGMSSMQ 231
L S + GQ TF K NFRH+K+ L +DE +D IL DLG+SS Q
Sbjct: 66 VTLKSYIDKGQV-------TFIKDNFRHLKARLTALGVDE------IDGILYDLGVSSPQ 112
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ ERGFS D PLDMRMD Q+ L A +++N++P ++ ++ +YGE+ + KI
Sbjct: 113 LDERERGFSYKQDAPLDMRMDRQSLLTAYEVVNTYPFNDLVKIFFKYGEDKFSKQIARKI 172
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
QAR + +T EL +LI++ P +++G A ++FQA+RI VNDEL + S+
Sbjct: 173 EQARAIKPIETTTELAELIKAAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADESIQ 230
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
+ LA GR+ VI+FHSLEDR+ KQ F +E + + + + +++ T+
Sbjct: 231 DAMELLALDGRISVITFHSLEDRLTKQLF-------KEASTVDVPKGLPLIPEDMKPTF- 282
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++++++PI PS E N R SAKLRV +KI
Sbjct: 283 ---------ELVSRKPILPSHSELTANKRAHSAKLRVAKKI 314
>gi|345304544|ref|YP_004826446.1| ribosomal RNA small subunit methyltransferase H [Rhodothermus
marinus SG0.5JP17-172]
gi|345113777|gb|AEN74609.1| Ribosomal RNA small subunit methyltransferase H [Rhodothermus
marinus SG0.5JP17-172]
Length = 327
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/339 (36%), Positives = 183/339 (53%), Gaps = 40/339 (11%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRA-HPELKLHIGVDVDPSALAKA 174
H+PV+ V++ + +VD T+G GH++A++ A PE ++ IG+D DP AL
Sbjct: 21 HVPVLWKAVVEGLVTD-PAGCYVDATIGGGGHTAALLDALAPEGRV-IGIDRDPEALDAV 78
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
R L G A + NF ++++L ++ + +D +L+DLG+SS Q++
Sbjct: 79 RRRL-----GDAVEAGRLQLVQGNFADLEAILDRLGV----AQIDGLLLDLGVSSHQLDE 129
Query: 235 PERGFSVLGDGPLDMRMDPQA-SLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
RGFS +GPLDMRMDP + A +L W + E+ VLR YGEE L I +
Sbjct: 130 ALRGFSFQAEGPLDMRMDPTSPGPTAAQLLERWSEYELAEVLRRYGEEPRARKLARAICR 189
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +T EL ++++ P KT RVFQALRIAVNDEL+ LE +L A
Sbjct: 190 AR---PIRTTAELAEVVRREVPPKEA-----TKTLARVFQALRIAVNDELQALERALEAA 241
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
+ PGGRL V+S+HSLEDR VK+ FL N++ + + + + R
Sbjct: 242 TRRVRPGGRLVVLSYHSLEDRRVKR-FL---------------RYGNLKGEPVRDFYGR- 284
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+I W + LT R I PS +E N R RSA+LR+ +++
Sbjct: 285 LIAPW--RPLTGRAIRPSDDEVAANPRARSARLRIAERV 321
>gi|313891489|ref|ZP_07825102.1| S-adenosyl-methyltransferase MraW [Dialister microaerophilus UPII
345-E]
gi|313120066|gb|EFR43245.1| S-adenosyl-methyltransferase MraW [Dialister microaerophilus UPII
345-E]
Length = 310
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 117/341 (34%), Positives = 174/341 (51%), Gaps = 33/341 (9%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
+ H+ V+ E++ + + + DCTLG AGH S + L IG+D D AL
Sbjct: 2 EFKHVTVLRREMISAVLTDKN-GVYADCTLGGAGHLSLLSEKVENGALLIGIDQDLDALK 60
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
A + H NF +IK++L + + N ++ + DLG+SS Q+
Sbjct: 61 AAELRMKDCTCNLNFVH-------SNFSNIKNILSEKNLN----KINGFIFDLGVSSYQL 109
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ RGFS + +G LDMRM+ + L A D++N + + ++ +++EYGEE + IV
Sbjct: 110 DEANRGFSYMHEGRLDMRMNQNSELTAHDVVNKYSEEKIAFIIKEYGEERWAKRIAEFIV 169
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
R + +TGELV +I++ P G R+ A R FQA+RI VN+EL +ES+++
Sbjct: 170 DYRKNKIIETTGELVSIIKAAIP--LGARKNGPHPAKRTFQAIRIEVNNELGIIESTIND 227
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
C DCL GGR+G+I+FHSLEDRIVK+TF +N+ I
Sbjct: 228 CVDCLVSGGRIGIITFHSLEDRIVKRTF------------------KNLAKQCICPPEFP 269
Query: 413 QIIQGWNGKI-LTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ KI L I P+ EE N R RSA LRV +KI
Sbjct: 270 LCVCNHQRKIKLLGNGIRPTDEEIAENPRARSAILRVAEKI 310
>gi|450177514|ref|ZP_21886419.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans SM1]
gi|449243628|gb|EMC42041.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans SM1]
Length = 316
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 124/339 (36%), Positives = 176/339 (51%), Gaps = 33/339 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+L E +D+ + +VD TLG AGHS ++ + D D A+ A+
Sbjct: 7 HITVLLHETIDMLDI-KPDGIYVDATLGGAGHSECLLSKLGKEGHLYCFDQDQKAIDNAK 65
Query: 176 AHLNSLLH-GQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
L + GQ +F K NFRH+KS L DE I +D I DLG+SS Q++
Sbjct: 66 IRLQQYVKTGQV-------SFIKDNFRHLKSRLA--DEGIYE--IDGICYDLGVSSPQLD 114
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
ERGFS D PLDMRM+ A L A D++N++ ++ R+ +YGE+ + KI
Sbjct: 115 KRERGFSYKKDAPLDMRMNQDAQLTAFDVVNTYDYRDLVRLFFKYGEDKFSKQIARKIES 174
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +T EL ++I+S P +++G A ++FQA+RI VNDEL E SL
Sbjct: 175 ARKEKLIETTAELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAAEESLTQA 232
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
D LA GR+ VI+FHSLEDR+ KQ F + D ++ +
Sbjct: 233 LDLLALNGRIAVITFHSLEDRLTKQLFKEV----------------TTLDVPKGLPFVPE 276
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+Q ++ ++PI P+A E N R SAKLRVIQKI
Sbjct: 277 NLQP-KFSLVNRKPILPNARELSENNRAHSAKLRVIQKI 314
>gi|257413358|ref|ZP_04742795.2| S-adenosyl-methyltransferase MraW [Roseburia intestinalis L1-82]
gi|257203798|gb|EEV02083.1| S-adenosyl-methyltransferase MraW [Roseburia intestinalis L1-82]
Length = 315
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 121/337 (35%), Positives = 178/337 (52%), Gaps = 31/337 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E ++ + R +VD TLG GHS I++ E IG+D D A+ A
Sbjct: 8 HYSVLLNETIENLNI-RPDGIYVDGTLGGGGHSYQILKRLGENGRLIGIDQDADAIQAAG 66
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L + K N+ ++K L I N GVD I++DLG+SS Q++ P
Sbjct: 67 ERLAEFGN-------KATLIRSNYANMKEELHAIGVN----GVDGIVLDLGVSSFQLDTP 115
Query: 236 ERGFSVLG-DGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGF+ D PLDMRMD + S A+DI+N + + ++ R++R+YGE+ + IV+
Sbjct: 116 ERGFTYREPDAPLDMRMDDRQSQTAKDIVNGYSEMDLYRIIRDYGEDKFAKNIAKHIVKE 175
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + + + GEL D+I++ P M+ + G A R FQA+RI +N EL+ L L
Sbjct: 176 RQKKTIETAGELTDIIRAAIP-MKVQVTGG-HPAKRTFQAIRIELNHELEVLSDHLDEMI 233
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
D L PGGR+ +I+FHSLEDRIVK F + NE D +
Sbjct: 234 DLLNPGGRICIITFHSLEDRIVKSNF-----------KRNENPCTCPSDFPVCVCG---- 278
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ GK++T++PI PS +E N R +SAKLRV ++
Sbjct: 279 -KVSKGKVITRKPILPSEKELEENSRSKSAKLRVFER 314
>gi|315652174|ref|ZP_07905171.1| exopolyphosphatase [Lachnoanaerobaculum saburreum DSM 3986]
gi|315485569|gb|EFU75954.1| exopolyphosphatase [Lachnoanaerobaculum saburreum DSM 3986]
Length = 311
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 121/339 (35%), Positives = 183/339 (53%), Gaps = 35/339 (10%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
+H V+L EV++ + + +VD TLG AGH+ +I+ +L IG+D D A+ A
Sbjct: 4 NHKSVLLDEVIESLNI-KPDGYYVDGTLGGAGHALEVIKRLKGGRL-IGIDQDADAIKAA 61
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L + + N+ +I+ +L + E I VD I +DLG+SS Q++
Sbjct: 62 TERLIDYKN-------RVIIVRDNYVNIEDILKR--EGI--DKVDGIYVDLGVSSYQLDT 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
+RGF+ D PLDMRMD + LKA DI+N++ +AE+ V+R+YGE+ + IV+
Sbjct: 111 ADRGFTYRFDAPLDMRMDDRNELKASDIVNNYSEAELFHVIRDYGEDRFAKNIAKHIVEY 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + + +T ELVD+I+S P M+ + G A R FQA+RI +N EL+ L+ S+
Sbjct: 171 RNKKKIETTFELVDIIKSAIP-MKIQVTGG-HPAKRTFQAIRIELNKELEVLKDSIDVMI 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
+ L PGGRL VI+FHSLEDRIVKQ F + +
Sbjct: 229 ELLKPGGRLSVITFHSLEDRIVKQAF------------------KKAESPCVCPKKFPVC 270
Query: 415 IQG--WNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ G G+++T++ + PS EE N R +SAKLRV +K
Sbjct: 271 VCGNKSKGRVITRKAVLPSKEELEENSRAKSAKLRVFEK 309
>gi|449951594|ref|ZP_21808724.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans 11SSST2]
gi|449165977|gb|EMB68937.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans 11SSST2]
Length = 316
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 124/339 (36%), Positives = 176/339 (51%), Gaps = 33/339 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+L E +D+ + +VD TLG AGHS ++ + D D A+ A+
Sbjct: 7 HITVLLHETIDMLDI-KPDGIYVDATLGGAGHSECLLSKLGKEGHLYCFDQDQKAIDNAK 65
Query: 176 AHLNSLLH-GQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
L + GQ +F K NFRH+KS L DE I +D I DLG+SS Q++
Sbjct: 66 MRLQQYVKTGQV-------SFIKDNFRHLKSRLA--DEGIYE--IDGICYDLGVSSPQLD 114
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
ERGFS D PLDMRM+ A L A D++N++ ++ R+ +YGE+ + KI
Sbjct: 115 ERERGFSYKKDAPLDMRMNQDAQLTAFDVVNTYDYRDLVRLFFKYGEDKFSKQIARKIES 174
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +T EL ++I+S P +++G A ++FQA+RI VNDEL E SL
Sbjct: 175 ARKEKLIETTAELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAAEESLTQA 232
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
D LA GR+ VI+FHSLEDR+ KQ F + D ++ +
Sbjct: 233 LDLLALNGRIAVITFHSLEDRLTKQLFKEV----------------TTLDVPKGLPFVPE 276
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+Q ++ ++PI P+A E N R SAKLRVIQKI
Sbjct: 277 NLQP-KFSLVNRKPILPNARELSENNRAHSAKLRVIQKI 314
>gi|425736753|ref|ZP_18855029.1| 16S rRNA m(4)C1402 methyltransferase [Staphylococcus massiliensis
S46]
gi|425483225|gb|EKU50377.1| 16S rRNA m(4)C1402 methyltransferase [Staphylococcus massiliensis
S46]
Length = 311
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 120/335 (35%), Positives = 175/335 (52%), Gaps = 30/335 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ VML E +D + ++DCTLG AGH+ ++ + I +D D +AL AR
Sbjct: 4 HVSVMLKETIDQLNIKED-GVYIDCTLGGAGHALYLLNQLNDNGKLIAIDQDTTALNNAR 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L LH H NFR+++S+L ++D VD I DLG+SS Q++
Sbjct: 63 EVLKDHLHKVIFVH-------DNFRNLRSILERLD----IEKVDGIYYDLGVSSPQLDVA 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D LDMRM+ L A +++N W + R+ YGEE + +I R
Sbjct: 112 ERGFSYHNDAKLDMRMNQDQELSAYEVVNEWSYDSLVRIFFRYGEEKFSKQIARRIEATR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +T +LVD+I+ P + RR+G A R+FQA+RIAVNDELK E S+ D
Sbjct: 172 EQTKIETTLQLVDVIKEGIPA-KARRKGG-HPAKRIFQAIRIAVNDELKAFEDSIEEAID 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
+ GR+ VI+FHSLEDR+ KQ F ++ E + R + I E + ++
Sbjct: 230 LVNVNGRISVITFHSLEDRLCKQIF--------QEYEKGPDVPRGL--PVIPEAYTPKL- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
K + ++PIT S + N R RSAKLRV +
Sbjct: 279 -----KRVNRKPITASEADLDENNRARSAKLRVAE 308
>gi|329122136|ref|ZP_08250744.1| S-adenosyl-L-methionine-dependent methyltransferase MraW [Dialister
micraerophilus DSM 19965]
gi|327466943|gb|EGF12459.1| S-adenosyl-L-methionine-dependent methyltransferase MraW [Dialister
micraerophilus DSM 19965]
Length = 310
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 117/341 (34%), Positives = 174/341 (51%), Gaps = 33/341 (9%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
+ H+ V+ E++ + + + DCTLG AGH S + L IG+D D AL
Sbjct: 2 EFKHVTVLRREMISAILTDKN-GVYADCTLGGAGHLSLLSEKVENGALLIGIDQDLDALK 60
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
A + H NF +IK++L + + N ++ + DLG+SS Q+
Sbjct: 61 AAELRMKDCTCNLNFVH-------SNFSNIKNILSEKNLN----QINGFIFDLGVSSYQL 109
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ RGFS + +G LDMRM+ + L A D++N + + ++ +++EYGEE + IV
Sbjct: 110 DEANRGFSYMHEGRLDMRMNQNSELTAHDVVNKYSEEKIAFIIKEYGEERWAKRIAEFIV 169
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
R + +TGELV +I++ P G R+ A R FQA+RI VN+EL +ES+++
Sbjct: 170 DYRKNKIIETTGELVSIIKAAIP--LGARKNGPHPAKRTFQAIRIEVNNELGIIESTIND 227
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
C DCL GGR+G+I+FHSLEDRIVK+TF +N+ I
Sbjct: 228 CVDCLVSGGRIGIITFHSLEDRIVKRTF------------------KNLAKQCICPPEFP 269
Query: 413 QIIQGWNGKI-LTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ KI L I P+ EE N R RSA LRV +KI
Sbjct: 270 LCVCNHQRKIKLLGNGIRPTDEEIAENPRARSAILRVAEKI 310
>gi|229918544|ref|YP_002887190.1| S-adenosyl-methyltransferase MraW [Exiguobacterium sp. AT1b]
gi|263447045|sp|C4L5T9.1|RSMH_EXISA RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|229469973|gb|ACQ71745.1| S-adenosyl-methyltransferase MraW [Exiguobacterium sp. AT1b]
Length = 310
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 126/316 (39%), Positives = 159/316 (50%), Gaps = 32/316 (10%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
+VDCTLG AGHS I + +L+ D D ALA A+ L P+ TF
Sbjct: 24 YVDCTLGGAGHSEEIAKRLTTGQLY-AFDQDDVALAHAKERLA--------PYEGRVTFI 74
Query: 197 K-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQA 255
K NF H+K L Q + VD +L DLG+SS Q++ ERGFS D PLDMRMD
Sbjct: 75 KSNFVHLKEELAQRG----VTKVDGVLFDLGVSSPQLDEAERGFSYNYDAPLDMRMDRSR 130
Query: 256 SLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTP 315
A ++N W E+ R+ YGEE + KI QAR + +T ELVDLI+ P
Sbjct: 131 DFSAYHVVNEWSFGELARIFFTYGEEKFSKQIARKIEQARADKPIETTFELVDLIKEAIP 190
Query: 316 GMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRI 375
R+ G A R FQA+RIAVNDEL + ++ D LA GR+ VI+FHSLEDRI
Sbjct: 191 APARRKGGH--PAKRTFQAIRIAVNDELNVFDRAVQDAIDLLAVNGRICVITFHSLEDRI 248
Query: 376 VKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEE 435
KQ F R L I + E K++T++PI S E
Sbjct: 249 CKQVF-----KERSQHPPLPPGLPVIPKEFEPEL-----------KLITRKPIVASEGEL 292
Query: 436 RLNCRCRSAKLRVIQK 451
N R RSAKLRV +K
Sbjct: 293 EDNRRSRSAKLRVAEK 308
>gi|449891612|ref|ZP_21788049.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans SF12]
gi|450006514|ref|ZP_21827280.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans NMT4863]
gi|450072538|ref|ZP_21848648.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans M2A]
gi|450126019|ref|ZP_21867943.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans U2A]
gi|449187550|gb|EMB89325.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans NMT4863]
gi|449211052|gb|EMC11471.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans M2A]
gi|449231865|gb|EMC31017.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans U2A]
gi|449256620|gb|EMC54437.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans SF12]
Length = 316
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 124/339 (36%), Positives = 176/339 (51%), Gaps = 33/339 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+L E +D+ + +VD TLG AGHS ++ + D D A+ A+
Sbjct: 7 HITVLLHETIDMLDI-KPDGIYVDATLGGAGHSECLLSKLGKEGHLYCFDQDQKAIDNAK 65
Query: 176 AHLNSLLH-GQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
L + GQ +F K NFRH+KS L DE I +D I DLG+SS Q++
Sbjct: 66 IRLQQYVKTGQV-------SFIKGNFRHLKSRLA--DEGIYE--IDGICYDLGVSSPQLD 114
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
ERGFS D PLDMRM+ A L A D++N++ ++ R+ +YGE+ + KI
Sbjct: 115 ERERGFSYKKDAPLDMRMNQDAQLTAFDVVNTYDYRDLVRLFFKYGEDKFSKQIARKIES 174
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +T EL ++I+S P +++G A ++FQA+RI VNDEL E SL
Sbjct: 175 ARKEKLIETTAELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAAEESLTQA 232
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
D LA GR+ VI+FHSLEDR+ KQ F + D ++ +
Sbjct: 233 LDLLALNGRIAVITFHSLEDRLTKQLFKEV----------------TTLDVPKGLPFVPE 276
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+Q ++ ++PI P+A E N R SAKLRVIQKI
Sbjct: 277 NLQP-KFSLVNRKPILPNARELSENNRAHSAKLRVIQKI 314
>gi|429220877|ref|YP_007182521.1| S-adenosyl-methyltransferase MraW [Deinococcus peraridilitoris DSM
19664]
gi|429131740|gb|AFZ68755.1| S-adenosyl-methyltransferase MraW [Deinococcus peraridilitoris DSM
19664]
Length = 293
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 128/338 (37%), Positives = 173/338 (51%), Gaps = 59/338 (17%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
+H PV+ EVLD + VD TLG AGH+ ++ A + G+D DP AL +
Sbjct: 5 THTPVLATEVLDALRPGPG-SVIVDGTLGGAGHTRLLLGAGATV---YGIDQDPYALERL 60
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
R + P L H N+R ++++L E + S V+ +L+D+G+SS Q+++
Sbjct: 61 RQ--------EQLPGL--HVIQGNYREMRTLLA---ERGVES-VNGVLLDIGVSSFQLDD 106
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
+RGFS D PLDMRM QA A D++N P+ E+ V+ EYGEE + L IV+A
Sbjct: 107 SDRGFSYHTDAPLDMRMS-QAGESAADVVNELPEEELAAVIYEYGEERHSRRLARGIVRA 165
Query: 295 RLRGGLHSTGELVDLIQSVTPGM-RGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
R + + +T +L D+I+ PG RG I A R FQALRI VNDEL L L A
Sbjct: 166 REQAPIETTVQLADIIKRAYPGYSRG-----IHPARRTFQALRIYVNDELGALRDGLQAA 220
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
+ LAP GRL VISFHSLEDRIVK+ ++R
Sbjct: 221 EEILAPEGRLAVISFHSLEDRIVKR-------------------------------FLRS 249
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
Q L KRP+ +E+ N R RSAKLRV K
Sbjct: 250 STQLTP---LHKRPLEAGEDEQESNPRARSAKLRVAVK 284
>gi|419717998|ref|ZP_14245340.1| S-adenosyl-methyltransferase MraW [Lachnoanaerobaculum saburreum
F0468]
gi|383305861|gb|EIC97204.1| S-adenosyl-methyltransferase MraW [Lachnoanaerobaculum saburreum
F0468]
Length = 311
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 120/339 (35%), Positives = 184/339 (54%), Gaps = 35/339 (10%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
+H V+L EV++ + + +VD TLG AGH+ +I+ +L IG+D D A+ A
Sbjct: 4 NHKSVLLDEVIESLNI-KPDGYYVDGTLGGAGHALEVIKRLKGGRL-IGIDQDADAIKAA 61
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L + + N+ +I+++L + E I VD I +DLG+SS Q++
Sbjct: 62 TERLIDYKN-------RVIIVRDNYVNIENILKR--EGI--DKVDGIYVDLGVSSYQLDT 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
+RGF+ D PLDMRMD + LKA DI+N++ +AE+ ++R+YGE+ + IV+
Sbjct: 111 ADRGFTYRFDAPLDMRMDDRNELKASDIVNNYSEAELFHIIRDYGEDRFAKNIAKHIVEY 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + + +T ELVD+I+S P M+ + G A R FQA+RI +N EL+ L+ S+
Sbjct: 171 RNKKKIETTFELVDIIKSAIP-MKIQVTGG-HPAKRTFQAIRIELNKELEVLKDSIDVMI 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
+ L PGGRL VI+FHSLEDRIVKQ F + +
Sbjct: 229 ELLKPGGRLSVITFHSLEDRIVKQAF------------------KKAESPCVCPKKFPVC 270
Query: 415 IQG--WNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ G G+++T++ + PS EE N R +SAKLRV +K
Sbjct: 271 VCGNKSKGRVITRKAVLPSKEELEENSRAKSAKLRVFEK 309
>gi|427717258|ref|YP_007065252.1| ribosomal RNA small subunit methyltransferase H [Calothrix sp. PCC
7507]
gi|427349694|gb|AFY32418.1| Ribosomal RNA small subunit methyltransferase H [Calothrix sp. PCC
7507]
Length = 299
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 127/337 (37%), Positives = 172/337 (51%), Gaps = 57/337 (16%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
SHIPV+ EV++ + ++D T+G GHS I+ A + L +D D AL A
Sbjct: 17 SHIPVLSREVVEGLAVHPG-GHYLDATVGGGGHSRLILDAAANVCL-TAIDQDEDALVAA 74
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+ +L +G+ + NF K L S D I+ DLG+SS ++
Sbjct: 75 QKYLAE--YGE-----RVKFVHSNFAAYKFPL---------SAFDGIIADLGVSSYHLDT 118
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
PERGFS LDMRMD + SL A D++N W +AE+ + +YGEE + +IV+
Sbjct: 119 PERGFSFRHTASLDMRMDKRRSLTASDVINGWDEAELADIFFKYGEERLSRRIARRIVER 178
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R L++T EL I S P R G I ATRVFQALRI +NDELK+LE+ +
Sbjct: 179 R---PLNTTVELASAIASAVPPKY--RYGRIHPATRVFQALRIVINDELKSLETFIEQAP 233
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
+ L PGGR+ +ISFHSLEDRIVK + LR N +R
Sbjct: 234 NALVPGGRIAIISFHSLEDRIVKHS------------------LR-------NSPLLR-- 266
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+LTK+PIT + EE N R RSAKLR+ Q+
Sbjct: 267 -------VLTKKPITATEEEIVNNGRSRSAKLRIAQR 296
>gi|153814616|ref|ZP_01967284.1| hypothetical protein RUMTOR_00830 [Ruminococcus torques ATCC 27756]
gi|145848110|gb|EDK25028.1| S-adenosyl-methyltransferase MraW [Ruminococcus torques ATCC 27756]
Length = 311
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 117/338 (34%), Positives = 173/338 (51%), Gaps = 34/338 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D + + +VD TLG GH+ + R IG+D D A+ A
Sbjct: 5 HVSVLLNETVDGLNV-KLDGVYVDATLGGGGHAYEVCRRLGSKGRFIGIDQDADAIKAAG 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L G+ K N+R +K L +NI VD I++DLG+SS Q++
Sbjct: 64 ERLKGF--GE-----KVTIIRSNYRDMKPQL----QNIGVDKVDGIVIDLGVSSYQLDTA 112
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD + + A DI+N + ++E+ RV+R+YGE+ + IV R
Sbjct: 113 ERGFSYRVDAPLDMRMDQRQKMTARDIVNEYSESELYRVIRDYGEDKFAKNIAKHIVAER 172
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +TG+L ++I P M+ R+ + R FQA+RI +N EL L SL +
Sbjct: 173 RKNPIETTGQLNEIISHAIP-MKFRKTSG-HPSKRTFQAIRIELNHELDVLRESLDDMIE 230
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L PGGR+ +I+FHSLEDRIVK F R + + +
Sbjct: 231 MLNPGGRICIITFHSLEDRIVKSAF------------------RKNENPCTCPSHFPVCV 272
Query: 416 QGW--NGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
G GK++T++PI PS E N R +SAKLR+ ++
Sbjct: 273 CGKISKGKVITRKPILPSEAETESNSRSKSAKLRIFER 310
>gi|24378941|ref|NP_720896.1| 16S rRNA m(4)C1402 methyltransferase [Streptococcus mutans UA159]
gi|397649186|ref|YP_006489713.1| 16S rRNA m(4)C1402 methyltransferase [Streptococcus mutans GS-5]
gi|449863410|ref|ZP_21778230.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans U2B]
gi|449872713|ref|ZP_21781563.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans 8ID3]
gi|449878647|ref|ZP_21783683.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans S1B]
gi|449886879|ref|ZP_21786491.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans SA41]
gi|449915119|ref|ZP_21796072.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans 15JP3]
gi|449930604|ref|ZP_21802132.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans 3SN1]
gi|449942320|ref|ZP_21805962.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans 11A1]
gi|449979799|ref|ZP_21816915.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans 5SM3]
gi|449985209|ref|ZP_21819540.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans NFSM2]
gi|449997196|ref|ZP_21823894.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans A9]
gi|450012414|ref|ZP_21829626.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans A19]
gi|450024588|ref|ZP_21831321.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans U138]
gi|450034269|ref|ZP_21834258.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans M21]
gi|450038801|ref|ZP_21835889.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans T4]
gi|450078395|ref|ZP_21850967.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans N3209]
gi|450083536|ref|ZP_21852970.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans N66]
gi|450089483|ref|ZP_21855194.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans NV1996]
gi|450116112|ref|ZP_21864304.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans ST1]
gi|450181313|ref|ZP_21887756.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans 24]
gi|30173045|sp|Q8DVM7.1|RSMH_STRMU RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|24376827|gb|AAN58202.1|AE014891_6 conserved hypoyhetical protein [Streptococcus mutans UA159]
gi|392602755|gb|AFM80919.1| 16S rRNA m(4)C1402 methyltransferase [Streptococcus mutans GS-5]
gi|449150731|gb|EMB54487.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans 11A1]
gi|449154353|gb|EMB57947.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans 8ID3]
gi|449157015|gb|EMB60468.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans 15JP3]
gi|449163415|gb|EMB66521.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans 3SN1]
gi|449177569|gb|EMB79864.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans 5SM3]
gi|449179432|gb|EMB81644.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans NFSM2]
gi|449182285|gb|EMB84320.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans A9]
gi|449188434|gb|EMB90144.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans A19]
gi|449191876|gb|EMB93328.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans U138]
gi|449196558|gb|EMB97818.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans M21]
gi|449201160|gb|EMC02168.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans T4]
gi|449210091|gb|EMC10574.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans N3209]
gi|449213094|gb|EMC13438.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans N66]
gi|449215411|gb|EMC15602.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans NV1996]
gi|449227270|gb|EMC26704.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans ST1]
gi|449246755|gb|EMC45052.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans 24]
gi|449249233|gb|EMC47377.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans S1B]
gi|449253592|gb|EMC51539.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans SA41]
gi|449265048|gb|EMC62378.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans U2B]
Length = 316
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 124/339 (36%), Positives = 176/339 (51%), Gaps = 33/339 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+L E +D+ + +VD TLG AGHS ++ + D D A+ A+
Sbjct: 7 HITVLLHETIDMLDI-KPDGIYVDATLGGAGHSECLLSKLGKEGHLYCFDQDQKAIDNAK 65
Query: 176 AHLNSLLH-GQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
L + GQ +F K NFRH+KS L DE I +D I DLG+SS Q++
Sbjct: 66 IRLQQYVKTGQV-------SFIKDNFRHLKSRLA--DEGIYE--IDGICYDLGVSSPQLD 114
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
ERGFS D PLDMRM+ A L A D++N++ ++ R+ +YGE+ + KI
Sbjct: 115 ERERGFSYKKDAPLDMRMNQDAQLTAFDVVNTYDYRDLVRLFFKYGEDKFSKQIARKIES 174
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +T EL ++I+S P +++G A ++FQA+RI VNDEL E SL
Sbjct: 175 ARKEKLIETTAELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAAEESLTQA 232
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
D LA GR+ VI+FHSLEDR+ KQ F + D ++ +
Sbjct: 233 LDLLALNGRIAVITFHSLEDRLTKQLFKEV----------------TTLDVPKGLPFVPE 276
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+Q ++ ++PI P+A E N R SAKLRVIQKI
Sbjct: 277 NLQP-KFSLVNRKPILPNARELSENNRAHSAKLRVIQKI 314
>gi|331696613|ref|YP_004332852.1| ribosomal RNA small subunit methyltransferase H [Pseudonocardia
dioxanivorans CB1190]
gi|326951302|gb|AEA24999.1| Ribosomal RNA small subunit methyltransferase H [Pseudonocardia
dioxanivorans CB1190]
Length = 326
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 110/269 (40%), Positives = 149/269 (55%), Gaps = 16/269 (5%)
Query: 114 SSHIPVMLGEVLDVFSSSRT--ITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
+ H+PV+L VL++ + VD TLG GHS+A++ AHPEL L +G+D DP AL
Sbjct: 13 ARHVPVLLPRVLELLGPALAGRPAVVVDATLGLGGHSAALLAAHPELTL-VGLDRDPQAL 71
Query: 172 AKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQ 231
A L + +TH + I VL ++ G D +L DLG+SS+Q
Sbjct: 72 ELAGRRLVAFAD-------RTHLVHAVYDRIADVLAELG----LPGADGVLFDLGVSSLQ 120
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ ERGFS D LDMRMDP A D+LN++ E+ R+LREYGEE + I
Sbjct: 121 LDADERGFSYSRDADLDMRMDPTTGPTAADVLNTYAVPELARILREYGEERFAGRIAAAI 180
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
+AR R + ELV+L+ P RR G A R FQALRI VN EL L +++
Sbjct: 181 GRARDRRPFTRSSELVELLYETVPAA-SRRTGG-HPAKRTFQALRIEVNGELDALRAAVP 238
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTF 380
A D L GGR+ V+S+HSLEDR+VK+
Sbjct: 239 AAIDSLTVGGRIVVLSYHSLEDRLVKREL 267
>gi|42561121|ref|NP_975572.1| S-adenosyl-methyltransferase MraW [Mycoplasma mycoides subsp.
mycoides SC str. PG1]
gi|115311585|sp|P62473.1|RSMH_MYCMS RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|42492618|emb|CAE77214.1| MraW methylase family protein [Mycoplasma mycoides subsp. mycoides
SC str. PG1]
gi|301320523|gb|ADK69166.1| S-adenosyl-methyltransferase MraW [Mycoplasma mycoides subsp.
mycoides SC str. Gladysdale]
Length = 308
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 123/340 (36%), Positives = 188/340 (55%), Gaps = 40/340 (11%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HIPV+L E ++ + + + +VDCTLG AGHSS I++ + +D D A+ +A+
Sbjct: 4 HIPVLLKESIE-YLNIKPDGIYVDCTLGRAGHSSEILKKLNQKGFLYAIDQDQIAIDQAK 62
Query: 176 AHL----NSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQ 231
L N+ L Q NF ++ ++L I+ VD IL DLG+SS Q
Sbjct: 63 EKLEQINNNFLLIQG-----------NFSNLSALLA-INHVF---NVDGILYDLGVSSPQ 107
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ RGFS DGPLDMRMD ++L A ++N++ ++++ +L +YGEES + KI
Sbjct: 108 IDIASRGFSYKMDGPLDMRMDLNSTLTAHQVINTYSESQISEILFKYGEESFSKSISKKI 167
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
V++R ++ST ELV++I+S P +++ A + FQALRI +N+EL LE+SL
Sbjct: 168 VESR---PINSTLELVEIIKSALPQKVLKQKKH--PAKKTFQALRIYINNELIALENSLK 222
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
D L R+ VI+FHSLE++IVK F + ++ +E N I+ D +N +
Sbjct: 223 QALDLLNSKARICVITFHSLEEKIVKNIFNNSTNYYQEQLLSN----LPIKAD-LNSKF- 276
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++ K+PI PS E N R SAKL VI+K
Sbjct: 277 ---------KLVIKKPIKPSLLELEQNHRSHSAKLWVIEK 307
>gi|395211787|ref|ZP_10399526.1| 16S rRNA m(4)C1402 methyltransferase [Pontibacter sp. BAB1700]
gi|394457592|gb|EJF11722.1| 16S rRNA m(4)C1402 methyltransferase [Pontibacter sp. BAB1700]
Length = 300
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 127/341 (37%), Positives = 174/341 (51%), Gaps = 50/341 (14%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H PVML E +D + + +VD T G GHS I +L+ D D A +++
Sbjct: 4 HRPVMLQECIDALAI-KPDGVYVDVTFGGGGHSKVIASKLTTGRLY-SFDQDRDAEEQSK 61
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILR-SGVDAILMDLGMSSMQVN 233
++S TF + NFR +K L + R VD IL DLG+SS Q N
Sbjct: 62 -KIDS----------PAFTFVRANFRDLKKYL-----RLYRVKEVDGILADLGVSSHQFN 105
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
ERGFS DGPLDMRMDP++ + A +++N++ ++ R+ YGE N L IV
Sbjct: 106 EAERGFSTRFDGPLDMRMDPESGMPASEVVNTYSQEQLHRIFGIYGEVKNAKTLAGVIVS 165
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
R R + + GE I S TP RG+ ++ +VFQALRI VNDELK LE L
Sbjct: 166 QRARKPIETIGEFKQAISSCTP--RGKENKYL---AQVFQALRIEVNDELKALEEMLEQA 220
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLS---IIDHNREDAEGNEEELRNIRDDNINETW 410
+ L PGGRL V+S+HSLEDR+VK F++ +D GNE++ D +N
Sbjct: 221 AEVLKPGGRLVVMSYHSLEDRLVK-NFIAKGKFFGEVEKDLFGNEKKPL----DAVN--- 272
Query: 411 IRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
++PI PS +E N R RSAKLR+ +K
Sbjct: 273 --------------RKPIVPSEQELLENSRSRSAKLRIAEK 299
>gi|373454600|ref|ZP_09546466.1| S-adenosyl-methyltransferase MraW [Dialister succinatiphilus YIT
11850]
gi|371935875|gb|EHO63618.1| S-adenosyl-methyltransferase MraW [Dialister succinatiphilus YIT
11850]
Length = 310
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 127/340 (37%), Positives = 180/340 (52%), Gaps = 37/340 (10%)
Query: 116 HIPVMLGEVLD-VFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
H V+L E++D V + + +VDCTLG GHS A+ E L IGVD D A+ A
Sbjct: 5 HTTVLLHEMIDSVLTDPHGV--YVDCTLGGGGHSMALSERLEEDALVIGVDQDQEAIDAA 62
Query: 175 RAHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
+ L G HL F + NF HI S+L +D VD + DLG+SS Q++
Sbjct: 63 ----SERLKGTGCRHL----FVRDNFSHISSILDSLD----IEKVDGFIFDLGVSSHQLD 110
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
+ ERGFS + +G LDMRMD + L A +I+N++ + ++ R++REYGEE + IV
Sbjct: 111 DGERGFSYMNNGKLDMRMDQRNPLTAYEIVNTYDEDDLTRIIREYGEERWARRIAQFIVN 170
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
R + +T +LV +I++ P RR G A R FQA+RI VN+EL L+ ++ AC
Sbjct: 171 FRNEKPIETTDDLVRVIKAAIPA-HARRNGP-HPAKRTFQAIRIEVNNELGILKDTMEAC 228
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
L GGRLGVI+F SLEDRI+K TF R + D I +
Sbjct: 229 VGHLKVGGRLGVITFQSLEDRIIKNTF------------------REMERDCICPPDLPV 270
Query: 414 IIQGWNGKILT-KRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ + + + + I PS E N R RSA LRV++K+
Sbjct: 271 CVCHHHRTVKSLGKAIKPSDREVEENPRARSAVLRVVEKV 310
>gi|449115559|ref|ZP_21752019.1| ribosomal RNA small subunit methyltransferase H [Treponema
denticola H-22]
gi|448955045|gb|EMB35812.1| ribosomal RNA small subunit methyltransferase H [Treponema
denticola H-22]
Length = 315
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 125/345 (36%), Positives = 171/345 (49%), Gaps = 41/345 (11%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
Q H V+L E L+ + FVD TLG GH+ A ++ +P+L IGVD D S
Sbjct: 2 QPVHTSVLLEECLEFLKPDASDNLFVDGTLGEGGHTEAFLKRYPQLNA-IGVDADVSIQE 60
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDA-----ILMDLGM 227
+A+ L G+ I+ LG DE D+ IL+DLG+
Sbjct: 61 RAKERLKPF--GE---------------RIRFHLGWSDEFFKNYPKDSAPPNLILLDLGI 103
Query: 228 SSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLL 287
S RGFS D PLDMR++P+ L A DI+NS+ + ++ ++ YGEE +
Sbjct: 104 SMFHYVKSGRGFSFSSDDPLDMRLNPELRLSAADIVNSYNEKDLADLIFNYGEERYSRKI 163
Query: 288 QNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLE 347
++IV+ R+ + EL D I P + R G I AT+ FQALRIAVN EL L
Sbjct: 164 ASRIVEQRVAAAFSTAKELADCIYKAVP--QNYRHGKIHPATKTFQALRIAVNGELDRLP 221
Query: 348 SSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNIN 407
L A F LAP GRLG+I+FHSLEDRIVK F + + + I
Sbjct: 222 RLLEAAFSVLAPNGRLGLITFHSLEDRIVKFYFKEL-----------GKSCTCPENMPIC 270
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ R ++LTK+ + S EE RLN RSA+LRV++KI
Sbjct: 271 KCGGRP-----RAEVLTKKAVKASDEEIRLNPPSRSARLRVVRKI 310
>gi|347542613|ref|YP_004857250.1| S-adenosyl-methyltransferase MraW [Candidatus Arthromitus sp.
SFB-rat-Yit]
gi|346985649|dbj|BAK81324.1| S-adenosyl-methyltransferase MraW [Candidatus Arthromitus sp.
SFB-rat-Yit]
Length = 304
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 114/317 (35%), Positives = 173/317 (54%), Gaps = 32/317 (10%)
Query: 137 FVDCTLGAAGHSSAII-RAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTF 195
+VDCTLG GHS+ I+ R H +L I +D D A+ + ++ H +
Sbjct: 17 YVDCTLGGGGHSAEILHRLHSTGRL-IAIDQDQYAIDYCKQKFSN--------HTNINFV 67
Query: 196 AKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQA 255
NF++I +L ++ VD ILMDLG+SS Q++ ERGFS + +G LDMRM+
Sbjct: 68 QDNFKNIDLILKTLE----IEKVDGILMDLGVSSYQIDTDERGFSYIRNGKLDMRMNTSQ 123
Query: 256 SLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTP 315
+ A DI+N + + ++ + R YGEE + KIV++R + +T +LV LI P
Sbjct: 124 TFSAYDIINEYDEEKLSHIFRVYGEEKYHKKIARKIVESRKLNKISTTHDLVKLIDDTIP 183
Query: 316 GMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRI 375
+++G + + +VFQALRI VN EL+ LE+++ + L GGR+ +I+FHSLEDRI
Sbjct: 184 RFEIKKRGHL--SKKVFQALRIEVNGELEILENTIVDSVNNLKIGGRIAIITFHSLEDRI 241
Query: 376 VKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEE 435
VK TF + E +D I + ++ I I+T++PI PS+ E
Sbjct: 242 VKNTFNYL-----------ATECICPKDFPICKCEKKKEIS-----IITRKPILPSSLEI 285
Query: 436 RLNCRCRSAKLRVIQKI 452
N R SAKLRV +K+
Sbjct: 286 SKNSRSSSAKLRVAEKL 302
>gi|62184992|ref|YP_219777.1| S-adenosyl-methyltransferase MraW [Chlamydophila abortus S26/3]
gi|68565433|sp|Q5L6B5.1|RSMH_CHLAB RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|62148059|emb|CAH63812.1| putative S-adenosyl-methyltransferase [Chlamydophila abortus S26/3]
Length = 298
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 123/338 (36%), Positives = 168/338 (49%), Gaps = 49/338 (14%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
SHIPV++ E L +F+ R F D T+GA GH+ A + A+P + + D D +AL+ A
Sbjct: 6 SHIPVLVNECLSLFAD-RHPKFFCDVTVGAGGHAEAFLSAYPSIVSYDASDRDVAALSMA 64
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+ HL H +K+ R E++ D IL DLG+SSMQ++N
Sbjct: 65 KEHLEKFGDRVHFHHASFEDLSKDPR----------EHVY----DGILADLGVSSMQLDN 110
Query: 235 PERGFSVLGDG-PLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
RGFS GD LDMRMD + A ++L++ + E+G++ REYGEE W IV
Sbjct: 111 LSRGFSFQGDDHALDMRMDVTKGITASEVLHTLREEELGKIFREYGEEPQWKNAAKAIVH 170
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
R R + + +L + V P R R++ I T +FQALR+ VN E L+ L +
Sbjct: 171 FRRRKKIVTVRDLKEATAKVFPSYRLRKK--IHPLTLIFQALRVYVNQEDVQLKVLLESA 228
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
LAPGGRL +ISF S EDR VK F R+
Sbjct: 229 MRWLAPGGRLIIISFCSSEDRPVKWFF-------------------------------RE 257
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ G ILTK+ I P+ EE R N RCRSAKLR +K
Sbjct: 258 AEKSGLGMILTKKVIMPTYEEIRKNPRCRSAKLRCFEK 295
>gi|375141599|ref|YP_005002248.1| S-adenosyl-methyltransferase MraW [Mycobacterium rhodesiae NBB3]
gi|359822220|gb|AEV75033.1| S-adenosyl-methyltransferase MraW [Mycobacterium rhodesiae NBB3]
Length = 379
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 113/301 (37%), Positives = 159/301 (52%), Gaps = 20/301 (6%)
Query: 88 MGLVKEKRRTRSNKDYDYESII-QQQQSSHIPVMLGEVLDVFSSSRTITS-------FVD 139
+ + R S++D + HIPV+L +++ + + T T+ VD
Sbjct: 32 LAYFPDARSALSDRDLGAGTFTGSDAMPDHIPVLLDRCVELLAPALTRTAADGSGAVLVD 91
Query: 140 CTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNF 199
TLGA GH+ + P L++ IG+D DP+AL A L+ + +
Sbjct: 92 ATLGAGGHTEKFLTEFPGLRV-IGLDRDPNALRIAGERLSPFGD-------RVMLVRTRY 143
Query: 200 RHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKA 259
IK VL D VD +L DLG+SSMQ++ +RGFS D PLDMRMDP A L A
Sbjct: 144 DGIKGVLA--DSGYRADKVDGVLFDLGVSSMQLDRTDRGFSYASDAPLDMRMDPDAPLTA 201
Query: 260 EDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRG 319
D++N++ + + R+LRE+GEE + +I + R +TGELV+L+ P
Sbjct: 202 ADVVNTYDERTLARLLREFGEERFASRIAAQIARRRADRPFSTTGELVELLYQAIPAP-A 260
Query: 320 RRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQT 379
RR G A R FQALRIAVN EL +L +L A D LA GGR+ V+++ SLEDRIVK
Sbjct: 261 RRTGG-HPAKRTFQALRIAVNGELDSLRDALPAALDVLANGGRIVVMAYQSLEDRIVKNQ 319
Query: 380 F 380
F
Sbjct: 320 F 320
>gi|322373647|ref|ZP_08048183.1| S-adenosyl-methyltransferase MraW [Streptococcus sp. C150]
gi|321278689|gb|EFX55758.1| S-adenosyl-methyltransferase MraW [Streptococcus sp. C150]
Length = 316
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 123/341 (36%), Positives = 181/341 (53%), Gaps = 37/341 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG AGHSS ++ E D D A+ A+
Sbjct: 7 HVTVLLHETVDMLDI-KPDGIYVDATLGGAGHSSYLLSQLSEKGHLYCFDQDQKAIDNAQ 65
Query: 176 AHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
L + G TF K NFR+++S L E + S +D IL DLG+SS Q++
Sbjct: 66 GRLKDYIDKGMV-------TFIKDNFRNLRSNL----EALGVSEIDGILYDLGVSSPQLD 114
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
ERGFS D LDMRM+ +ASL A +++N++P ++ R+ +YGE+ + KI Q
Sbjct: 115 ERERGFSYKQDAKLDMRMNEEASLTAYEVVNTYPYNDLVRIFFKYGEDKFSKQIARKIEQ 174
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +T EL ++I+S P +++G A ++FQA+RI VNDEL + S+
Sbjct: 175 ARQVKPIETTTELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADESIQEA 232
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTF--LSIIDHNREDAEGNEEELRNIRDDNINETWI 411
D LA GR+ VI+FHSLEDR+ KQ F S +D + +I
Sbjct: 233 LDLLAVDGRISVITFHSLEDRLTKQLFKEASTVDVPK------------------GLPFI 274
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ +Q ++ ++PI PS EE N R SAKLRV +KI
Sbjct: 275 PEDLQPKVA-LVNRKPILPSQEELEANNRSHSAKLRVAKKI 314
>gi|317057677|ref|YP_004106144.1| S-adenosyl-methyltransferase MraW [Ruminococcus albus 7]
gi|315449946|gb|ADU23510.1| S-adenosyl-methyltransferase MraW [Ruminococcus albus 7]
Length = 311
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 129/339 (38%), Positives = 174/339 (51%), Gaps = 39/339 (11%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HIPV+L E ++ + + D T G AGHS I + +L I VD DP A+A A
Sbjct: 5 HIPVLLNECIEGLDI-KPDGIYCDGTAGGAGHSREIAKRLTTGRL-ISVDRDPEAVAVAT 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L+ L A R S L +I + G D ILMDLG+SS Q++N
Sbjct: 63 ERLSGLP-------------ATVVRGNYSELDEIFARLGIEGADGILMDLGVSSYQLDNA 109
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRM + L A D++NS+ + + R++ EYG+E + KIVQ R
Sbjct: 110 ERGFSYHTDAPLDMRMSSEG-LSARDVVNSYDERTLARIIFEYGDEKFSRNIAKKIVQVR 168
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +T EL ++I+S P R + K + FQA+RI VN EL+ L +L FD
Sbjct: 169 EDKPIETTLELAEVIKSAVPQKVRREKNPCK---KTFQAIRIEVNAELEHLSIALDKAFD 225
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L GGRL +I+FHSLEDR+VKQ F S +G I +
Sbjct: 226 LLNAGGRLCIITFHSLEDRLVKQRFKSF-------CQG-----------CICPPDFPVCV 267
Query: 416 QGWN--GKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
G GK++T++PI PS E N R SAKLR+I+KI
Sbjct: 268 CGRTPRGKLITRKPIEPSDSENEENKRAHSAKLRIIEKI 306
>gi|336437141|ref|ZP_08616850.1| ribosomal RNA small subunit methyltransferase H 2 [Lachnospiraceae
bacterium 1_4_56FAA]
gi|336006275|gb|EGN36311.1| ribosomal RNA small subunit methyltransferase H 2 [Lachnospiraceae
bacterium 1_4_56FAA]
Length = 319
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 118/338 (34%), Positives = 175/338 (51%), Gaps = 34/338 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + + +VD TLG GH+ + IG+D D +A+ A
Sbjct: 5 HTSVLLEETIDGLAV-KPDGIYVDATLGGGGHAFEVCSRLNGNGRFIGIDQDAAAIEAAG 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L G+ K N+R +KSVL +I VD I++DLG+SS Q++
Sbjct: 64 ERLKDF--GE-----KVTIIRSNYRELKSVL----RSIGVEKVDGIVLDLGVSSYQLDTA 112
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D LDMRMD + A+DI+N++ + E+ RV+R+YGE+ + IV R
Sbjct: 113 ERGFSYRADASLDMRMDQRQQTTAKDIVNTYSETELYRVIRDYGEDKFAKNIAKHIVMER 172
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +TG+L ++I+ P M+ ++ G + R FQA+RI +N EL+ L SL D
Sbjct: 173 EKNPIETTGQLNEVIRRAIP-MKFQKNGG-HPSKRTFQAIRIELNRELEVLRESLDEMID 230
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L PGGR+ +I+FHSLEDRIVK F R D + +
Sbjct: 231 MLNPGGRICIITFHSLEDRIVKSAF------------------RKNEDPCTCPSHFPVCV 272
Query: 416 QG--WNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
G GK++T++PI P EE N R +SAKLR+ ++
Sbjct: 273 CGNVSKGKVITRKPILPGEEELENNSRSKSAKLRIFER 310
>gi|312869527|ref|ZP_07729682.1| S-adenosyl-methyltransferase MraW [Lactobacillus oris PB013-T2-3]
gi|417885404|ref|ZP_12529558.1| S-adenosyl-methyltransferase MraW [Lactobacillus oris F0423]
gi|311094974|gb|EFQ53263.1| S-adenosyl-methyltransferase MraW [Lactobacillus oris PB013-T2-3]
gi|341595326|gb|EGS37975.1| S-adenosyl-methyltransferase MraW [Lactobacillus oris F0423]
Length = 317
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 126/337 (37%), Positives = 173/337 (51%), Gaps = 28/337 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E + + T +VD TLG GH+SAI+ L+ D D +A+ R
Sbjct: 8 HVTVLLQEAVAGLNVQPAGT-YVDGTLGGGGHTSAILGQLTTGHLY-SFDQDETAIDYNR 65
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L L K NFRH++ L + + + VD +L DLG+SS Q ++
Sbjct: 66 DRLKDALAAG-----KLTLIEDNFRHLQKDLAA--QGVHK--VDGVLYDLGVSSPQFDDA 116
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
+RGFS D PLDMRM+ SL A +++N WP + R+L YGEE + KI Q R
Sbjct: 117 QRGFSYQLDAPLDMRMNQGQSLSAMEVVNEWPYERLVRILYRYGEERFAKQIARKIEQRR 176
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
R + +T ELVD+I+ P RR G A + FQA+RIAVNDEL LE SL
Sbjct: 177 QREPIRTTFELVDVIKEAIPAA-ARRHGG-HPAKKSFQAIRIAVNDELGALEESLEQALA 234
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
LA GGR+ VI+F SLEDR+VK F +E +I DD +
Sbjct: 235 MLAVGGRISVITFQSLEDRLVKTMF---------------KEKSSISDDLPQGLPVIPEG 279
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ K++ ++PI P +E N R SAKLR+I+KI
Sbjct: 280 MSPDFKLINRKPILPGTQELAENHRAHSAKLRIIEKI 316
>gi|430744040|ref|YP_007203169.1| S-adenosyl-methyltransferase MraW [Singulisphaera acidiphila DSM
18658]
gi|430015760|gb|AGA27474.1| S-adenosyl-methyltransferase MraW [Singulisphaera acidiphila DSM
18658]
Length = 317
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 117/290 (40%), Positives = 152/290 (52%), Gaps = 51/290 (17%)
Query: 162 IGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAI 221
IG+D DP L +L GQA L + + VL +++ + VD I
Sbjct: 57 IGLDRDPDML---------VLAGQATSGLPVSLVQAPYSDLADVLYKMELD----AVDGI 103
Query: 222 LMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEE 281
L+DLG+SS Q+ ERGFS DGPLDMR DP ASL A +++N+W + E+ + EYGEE
Sbjct: 104 LLDLGLSSDQLAWAERGFSFAVDGPLDMRFDPNASLTAAEVVNTWKEEELANLFFEYGEE 163
Query: 282 SNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVND 341
+ +IV+ R + +TG L ++++ PG + G I ATRVFQALRI VND
Sbjct: 164 RYSRRVAKRIVEGRRIVPITTTGRLAEIVRKSIPG----KWGPIDPATRVFQALRIRVND 219
Query: 342 ELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNI 401
EL LES L D L PGGR +ISFHSLEDR VK F
Sbjct: 220 ELDHLESILEQLPDLLRPGGRAVIISFHSLEDRRVKVAF--------------------- 258
Query: 402 RDDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
RDD N K LT++P+ SAEE +N R RSAKLRV ++
Sbjct: 259 RDDP-------------NLKALTRKPVMASAEEMAVNPRARSAKLRVAER 295
>gi|392971777|ref|ZP_10337170.1| ribosomal RNA small subunit methyltransferase H [Staphylococcus
equorum subsp. equorum Mu2]
gi|392510316|emb|CCI60459.1| ribosomal RNA small subunit methyltransferase H [Staphylococcus
equorum subsp. equorum Mu2]
Length = 304
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 122/331 (36%), Positives = 175/331 (52%), Gaps = 30/331 (9%)
Query: 120 MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLN 179
ML E +D + + + +VDCTLG AGH+ ++ + I +D D +A+ A+ L
Sbjct: 1 MLKETID-YLNIKEDGVYVDCTLGGAGHALYLLNQLGDEGRLIAIDQDRTAIENAKEVLK 59
Query: 180 SLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGF 239
LH H NFR + +L D NI VD I DLG+SS Q++ PERGF
Sbjct: 60 EHLHKVTFVH-------SNFRKLTEILN--DLNI--EKVDGIYYDLGVSSPQLDVPERGF 108
Query: 240 SVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGG 299
S D LDMRMD SL A +++N W ++ R+ YGEE + +I Q R +
Sbjct: 109 SYHNDAKLDMRMDQTQSLSAYEVVNDWQFEKLVRIFHRYGEEKFSKQIARRIEQNREQKP 168
Query: 300 LHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAP 359
+ +T ELVD+I+ P + RR+G A R+FQA+RIAVNDEL + E SL +
Sbjct: 169 IETTLELVDVIKEGIPA-KARRKGG-HPAKRIFQAIRIAVNDELSSFEDSLEQAIGAVKI 226
Query: 360 GGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWN 419
GR+ VI+FHSLEDR+ KQ F ++ E + R + I E + ++
Sbjct: 227 DGRISVITFHSLEDRLCKQMF--------QEYEKGPDVPRGL--PVIPEAYTPKL----- 271
Query: 420 GKILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
K + ++PIT + E+ N R RSAKLRV +
Sbjct: 272 -KRVNRKPITAAEEDLDNNNRARSAKLRVAE 301
>gi|354593364|ref|ZP_09011407.1| S-adenosyl-methyltransferase MraW [Commensalibacter intestini A911]
gi|353672475|gb|EHD14171.1| S-adenosyl-methyltransferase MraW [Commensalibacter intestini A911]
Length = 316
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 126/337 (37%), Positives = 182/337 (54%), Gaps = 35/337 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHP-ELKLHIGVDVDPSALAKA 174
H VML EV+ + + + +VD T G G+S AI+ A P E+ +G+D DP A+A+
Sbjct: 12 HFSVMLNEVMTLLNPQPN-SIYVDGTFGGGGYSKAILSAAPCEV---LGIDRDPDAIARG 67
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
R + Q P L H +F +I S+L +NI + D I++DLG+SS Q++
Sbjct: 68 RE-----IQKQ-FPSL--HLLQGDFENIDSLLKS--QNI--TQCDGIVLDLGVSSFQIDQ 115
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
+RGFS DGPLDMRM + A D++NS + E+ VL YGEE + IV
Sbjct: 116 ADRGFSFRFDGPLDMRMS-RTGKTAADLVNSLSETELADVLFHYGEERFSRRIAKAIVNR 174
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
RL +T +L LIQ P + + I ATR FQ LRIAVN+EL+ + ++L+A
Sbjct: 175 RLEAPFETTQDLASLIQRTIPTDKSK----INPATRSFQGLRIAVNNELEQIHTALNAAL 230
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
L PGG+L V+SFHSLEDRIVK A G + +++ + Q
Sbjct: 231 KLLKPGGKLIVVSFHSLEDRIVKDIM--------NKAAGRVAKPSRYLPLSLSPS---QD 279
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
I + ++LT +P PS +E +N R RSA+LR I++
Sbjct: 280 ITSF--ELLTTKPQRPSEQECHINSRSRSARLRAIKR 314
>gi|226323690|ref|ZP_03799208.1| hypothetical protein COPCOM_01465 [Coprococcus comes ATCC 27758]
gi|225207874|gb|EEG90228.1| S-adenosyl-methyltransferase MraW [Coprococcus comes ATCC 27758]
Length = 311
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 114/319 (35%), Positives = 173/319 (54%), Gaps = 35/319 (10%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
+VD TLG GH+ + R IG+D D +A+ A L+ G+ +
Sbjct: 25 YVDGTLGGGGHAYEVCRRLNNKGSFIGIDQDAAAIEAAGTRLSDF--GE-----RVTIIR 77
Query: 197 KNFRHIKSVLGQ--IDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQ 254
N+ +KS L + ID+ VD I++DLG+SS Q++ +RGFS D PLDMRMD +
Sbjct: 78 SNYCDMKSRLHEKGIDK------VDGIVLDLGVSSYQLDTADRGFSYRVDAPLDMRMDTR 131
Query: 255 ASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVT 314
+L A++I+N + + ++ R++R+YGE+ + IV AR +G + +TG+L ++I+
Sbjct: 132 QTLSAKEIVNGYSEMDLFRIIRDYGEDKFAKNIAKHIVMAREKGPIETTGQLAEIIRQSI 191
Query: 315 PGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDR 374
P + G A R FQA+RI N EL+ L SL D L PGGR+ +I+FHSLEDR
Sbjct: 192 PMKFQKMSGH--PAKRTFQAIRIECNRELEVLRDSLDDMIDILNPGGRICIITFHSLEDR 249
Query: 375 IVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII-QGWNGKILTKRPITPSAE 433
IVK F + NE T+ + + GK++TK+PI PS E
Sbjct: 250 IVKGIF-----------KKNENPC------TCPSTFPVCVCGKVSKGKVITKKPILPSEE 292
Query: 434 EERLNCRCRSAKLRVIQKI 452
E +N R +SAKLR+ +++
Sbjct: 293 EMEVNSRSKSAKLRIFERV 311
>gi|449989665|ref|ZP_21821192.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans NVAB]
gi|449182336|gb|EMB84368.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans NVAB]
Length = 316
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 124/339 (36%), Positives = 176/339 (51%), Gaps = 33/339 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+L E +D+ + +VD TLG AGHS ++ + D D A+ A+
Sbjct: 7 HITVLLHETIDMLDI-KPDGIYVDATLGGAGHSECLLSKLGKEGHLYCFDQDQKAIDNAK 65
Query: 176 AHLNSLLH-GQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
L + GQ +F K NFRH+KS L DE I +D I DLG+SS Q++
Sbjct: 66 IRLQQYVKTGQV-------SFIKDNFRHLKSRLA--DEGIYE--IDGICYDLGVSSPQLD 114
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
ERGFS D PLDMRM+ A L A D++N++ ++ R+ +YGE+ + KI
Sbjct: 115 ERERGFSYKKDAPLDMRMNQDAQLTAFDVVNTYNYRDLVRLFFKYGEDKFSKQIARKIES 174
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +T EL ++I+S P +++G A ++FQA+RI VNDEL E SL
Sbjct: 175 ARKEKLIETTAELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAAEESLTQA 232
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
D LA GR+ VI+FHSLEDR+ KQ F + D ++ +
Sbjct: 233 LDLLALNGRIAVITFHSLEDRLTKQLFKEV----------------TTLDVPKGLPFVPE 276
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+Q ++ ++PI P+A E N R SAKLRVIQKI
Sbjct: 277 NLQP-KFSLVNRKPILPNARELSENNRAHSAKLRVIQKI 314
>gi|322516106|ref|ZP_08069041.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Streptococcus vestibularis ATCC 49124]
gi|322125401|gb|EFX96751.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Streptococcus vestibularis ATCC 49124]
Length = 316
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 123/341 (36%), Positives = 181/341 (53%), Gaps = 37/341 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG AGHSS ++ E D D A+ A+
Sbjct: 7 HVTVLLHETVDMLDI-KPDGIYVDATLGGAGHSSYLLSQLSEKGHLYCFDQDQKAIDNAQ 65
Query: 176 AHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
L + G TF K NFR+++S L E + S +D IL DLG+SS Q++
Sbjct: 66 VRLKDYIDKGMV-------TFIKDNFRNLRSNL----EALGVSEIDGILYDLGVSSPQLD 114
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
ERGFS D LDMRM+ +ASL A +++N++P ++ R+ +YGE+ + KI Q
Sbjct: 115 ERERGFSYKQDAKLDMRMNEEASLTAYEVVNTYPYNDLVRIFFKYGEDKFSKQIARKIEQ 174
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +T EL ++I+S P +++G A ++FQA+RI VNDEL + S+
Sbjct: 175 ARQVKPIETTTELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADESIQEA 232
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTF--LSIIDHNREDAEGNEEELRNIRDDNINETWI 411
D LA GR+ VI+FHSLEDR+ KQ F S +D + +I
Sbjct: 233 LDLLAVDGRISVITFHSLEDRLTKQLFKEASTVDVPK------------------GLPFI 274
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ +Q ++ ++PI PS EE N R SAKLRV +KI
Sbjct: 275 PEDLQPKVA-LVNRKPILPSQEELEANNRSHSAKLRVAKKI 314
>gi|227529006|ref|ZP_03959055.1| S-adenosyl-methyltransferase [Lactobacillus vaginalis ATCC 49540]
gi|227351018|gb|EEJ41309.1| S-adenosyl-methyltransferase [Lactobacillus vaginalis ATCC 49540]
Length = 316
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 122/337 (36%), Positives = 179/337 (53%), Gaps = 28/337 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E + + R ++VD TLG GHSSAI+ +L+ D D +A+ +
Sbjct: 6 HVTVLLNEAVAGLNI-RPDGTYVDATLGGGGHSSAILNQLTTGRLY-SFDQDQTAIRYNQ 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
HL + ++ NFR++ + L + N ++S VD I+ DLG+SS Q ++
Sbjct: 64 QHLKKFIDDG-----RSILIEDNFRNLGTALAK---NGVKS-VDGIVYDLGVSSPQFDDA 114
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
+RGFS D PLDMRM+ Q +L A +++N WP ++ ++L YGEE + KI + R
Sbjct: 115 QRGFSYKLDAPLDMRMNQQQALSAMNVVNEWPYEKLVKILYRYGEERFAKQIARKIERRR 174
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +T ELVD+I+ P RR G A + FQA+RIAVNDEL LE SL +
Sbjct: 175 ESKPIKTTFELVDVIKEAIPAA-ARRHGG-HPAKKTFQAIRIAVNDELGALEDSLEQALE 232
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L GGR+ VI+F SLEDR+VK F + E G + + +
Sbjct: 233 LLNVGGRISVITFQSLEDRLVKTMFHEKVSLADELPPG-----LPVIPPEMQPKF----- 282
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
K++ K+PI PS EE N R SAKLR+I++I
Sbjct: 283 -----KLINKKPILPSQEELANNHRAHSAKLRIIERI 314
>gi|225028107|ref|ZP_03717299.1| hypothetical protein EUBHAL_02377 [Eubacterium hallii DSM 3353]
gi|224954577|gb|EEG35786.1| S-adenosyl-methyltransferase MraW [Eubacterium hallii DSM 3353]
Length = 315
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 119/339 (35%), Positives = 177/339 (52%), Gaps = 36/339 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H +ML EV++ + +VD TLG AGHSS I++ E IG+D D A+ A
Sbjct: 5 HKSIMLEEVIESLAIKPN-GIYVDGTLGGAGHSSEIVKRLGEDGRLIGIDQDGEAIEAAT 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L P+ T + N+ +K VL ++ VD IL+DLG+SS Q++N
Sbjct: 64 KRLK--------PYKDKVTIVRSNYAQMKEVL----RDLGIPKVDGILLDLGVSSYQLDN 111
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGF+ D PLDMRMD + + A+DI+N + + E+ ++R YGE+ + IVQA
Sbjct: 112 AERGFTYREDVPLDMRMDQRQTKTAKDIVNDYSEMELYHIIRNYGEDKFAKNIAKHIVQA 171
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + + +TG+L+++I++ P + R A + FQA+RI +N EL L+++L
Sbjct: 172 RQKTPIETTGQLIEVIKAAIP--KKVRATGGHPAKKTFQAIRIELNHELDVLKNNLEDMI 229
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
D L GR+ +I+FHSLEDRIVK F R I
Sbjct: 230 DLLNDEGRIAIITFHSLEDRIVKNIF------------------RTSERPCICPPEFPVC 271
Query: 415 IQGW--NGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ G GK++T++PI P EE N R +SAKLRV ++
Sbjct: 272 VCGRVSKGKVITRKPIVPGKEELEENSRSKSAKLRVFER 310
>gi|94984873|ref|YP_604237.1| S-adenosyl-methyltransferase MraW [Deinococcus geothermalis DSM
11300]
gi|263446197|sp|Q1J0B6.1|RSMH_DEIGD RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|94555154|gb|ABF45068.1| methyltransferase [Deinococcus geothermalis DSM 11300]
Length = 308
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 121/317 (38%), Positives = 162/317 (51%), Gaps = 58/317 (18%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR-AHLNSLLHGQAHPHLKTHTF 195
VD TLG AGH+ ++ A + IG+D DP AL +AR A L L
Sbjct: 38 IVDGTLGGAGHTRLLLEAGASV---IGIDQDPYALNRAREAQLPQLT-----------VL 83
Query: 196 AKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQA 255
N+R ++ +L I + VD +L+D+G+SS Q+++ RGFS D PLDMRM Q+
Sbjct: 84 EGNYRDMRELLAGIGV----TQVDGVLLDIGVSSFQLDDAARGFSYHTDAPLDMRMA-QS 138
Query: 256 SLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTP 315
A +++N +P+ E+ ++ EYGEE + + IVQAR + + ST +L ++I+ P
Sbjct: 139 GESAAEVVNGYPEEELAAIIYEYGEERHSRRIARAIVQARTQAPIQSTVQLAEIIKRAYP 198
Query: 316 GMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRI 375
G I A R FQALRI VNDEL L L A L PGGRL VI+FHSLEDRI
Sbjct: 199 GF----SKGIHPARRTFQALRIHVNDELGALRDGLRAAEALLTPGGRLAVIAFHSLEDRI 254
Query: 376 VKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEE 435
VK+ FL + T K LTKRP+ S EE
Sbjct: 255 VKR-FL-----------------------RASPTL----------KSLTKRPVEASEEER 280
Query: 436 RLNCRCRSAKLRVIQKI 452
N R RSAKLR +K+
Sbjct: 281 GRNPRARSAKLRAAEKV 297
>gi|417934111|ref|ZP_12577431.1| S-adenosyl-methyltransferase MraW [Streptococcus mitis bv. 2 str.
F0392]
gi|340770681|gb|EGR93196.1| S-adenosyl-methyltransferase MraW [Streptococcus mitis bv. 2 str.
F0392]
Length = 316
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 123/342 (35%), Positives = 184/342 (53%), Gaps = 39/342 (11%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 7 HVTVLLHETIDMLNV-KPDGIYVDATLGGAGHSEYLLSKLSEKGHLYAFDQDQNAIDNAQ 65
Query: 176 AHLNSLLHGQAHPHLKTH--TFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
L P+++ TF K NFRH+++ L + D +D I DLG+SS Q+
Sbjct: 66 KRLA--------PYIEKGMVTFIKDNFRHLQARLQEAD----VQEIDGICYDLGVSSPQL 113
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ ERGFS D PLDMRM+ +ASL A +++N + ++ R+ +YGE+ + KI
Sbjct: 114 DQRERGFSYKKDAPLDMRMNQEASLTAYEVVNHYDYHDLVRIFFKYGEDKFSKQIARKIE 173
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
QAR + +T EL ++I+S P +++G A ++FQA+RI VNDEL + S+
Sbjct: 174 QAREVKPIETTTELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADESIQQ 231
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNINETW 410
D LA GR+ VI+FHSLEDR+ KQ F ++A E + L I DD
Sbjct: 232 AMDMLALDGRISVITFHSLEDRLTKQLF--------KEASTVEVPKGLPFIPDD------ 277
Query: 411 IRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++++++PI PSAEE N R SAKLRV +KI
Sbjct: 278 -----LKPKMELVSRKPILPSAEELAANNRSHSAKLRVARKI 314
>gi|449120442|ref|ZP_21756827.1| ribosomal RNA small subunit methyltransferase H [Treponema
denticola H1-T]
gi|449122847|ref|ZP_21759179.1| ribosomal RNA small subunit methyltransferase H [Treponema
denticola MYR-T]
gi|448947162|gb|EMB28010.1| ribosomal RNA small subunit methyltransferase H [Treponema
denticola MYR-T]
gi|448947837|gb|EMB28680.1| ribosomal RNA small subunit methyltransferase H [Treponema
denticola H1-T]
Length = 315
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 125/345 (36%), Positives = 171/345 (49%), Gaps = 41/345 (11%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
Q H V+L E L+ + FVD TLG GH+ A ++ +P+L IGVD D S
Sbjct: 2 QPVHTSVLLEECLEFLKPDASDNLFVDGTLGEGGHTEAFLKRYPQLNA-IGVDADVSIQE 60
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDA-----ILMDLGM 227
+A+ L G+ I+ LG DE D+ IL+DLG+
Sbjct: 61 RAKERLKPF--GE---------------RIRFHLGWSDEFFKNYPKDSAPPNLILLDLGI 103
Query: 228 SSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLL 287
S RGFS D PLDMR++P+ L A DI+NS+ + ++ ++ YGEE +
Sbjct: 104 SMFHYVKSGRGFSFSSDEPLDMRLNPELRLSAADIVNSYNEKDLADLIFNYGEERYSRKI 163
Query: 288 QNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLE 347
++IV+ R+ + EL D I P + R G I AT+ FQALRIAVN EL L
Sbjct: 164 ASRIVEQRVASAFSTAKELADCIYKAVP--QNYRHGKIHPATKTFQALRIAVNGELDRLP 221
Query: 348 SSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNIN 407
L A F LAP GRLG+I+FHSLEDRIVK F + + + I
Sbjct: 222 RLLEAAFSVLAPNGRLGLITFHSLEDRIVKFYFKEL-----------GKSCTCPENMPIC 270
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ R ++LTK+ + S EE RLN RSA+LRV++KI
Sbjct: 271 KCGGRP-----RAEVLTKKAVKASDEEIRLNPPSRSARLRVVRKI 310
>gi|450102325|ref|ZP_21859302.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans SF1]
gi|450172191|ref|ZP_21884420.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans SM4]
gi|449219042|gb|EMC19027.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans SF1]
gi|449243082|gb|EMC41548.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans SM4]
Length = 316
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 124/339 (36%), Positives = 176/339 (51%), Gaps = 33/339 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+L E +D+ + +VD TLG AGHS ++ + D D A+ A+
Sbjct: 7 HITVLLHETIDMLDI-KPDGIYVDATLGGAGHSECLLSKLGKEGHLYCFDQDQKAIDNAK 65
Query: 176 AHLNSLLH-GQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
L + GQ +F K NFRH+KS L DE I +D I DLG+SS Q++
Sbjct: 66 IRLQQYVKTGQV-------SFIKDNFRHLKSRLA--DEGICE--IDGICYDLGVSSPQLD 114
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
ERGFS D PLDMRM+ A L A D++N++ ++ R+ +YGE+ + KI
Sbjct: 115 ERERGFSYKKDAPLDMRMNQDAQLTAFDVVNTYDYRDLVRLFFKYGEDKFSKQIARKIES 174
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +T EL ++I+S P +++G A ++FQA+RI VNDEL E SL
Sbjct: 175 ARKEKLIETTAELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAAEESLTQA 232
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
D LA GR+ VI+FHSLEDR+ KQ F + D ++ +
Sbjct: 233 LDLLALNGRIAVITFHSLEDRLTKQLFKEV----------------TTLDVPKGLPFVPE 276
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+Q ++ ++PI P+A E N R SAKLRVIQKI
Sbjct: 277 NLQP-KFSLVNRKPILPNARELSENNRAHSAKLRVIQKI 314
>gi|417935787|ref|ZP_12579104.1| S-adenosyl-methyltransferase MraW [Streptococcus infantis X]
gi|343402696|gb|EGV15201.1| S-adenosyl-methyltransferase MraW [Streptococcus infantis X]
Length = 316
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 123/342 (35%), Positives = 183/342 (53%), Gaps = 39/342 (11%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ VML E +D+ + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 7 HVTVMLHETIDMLDV-KPDGIYVDATLGGAGHSEYLLSKLSEKGHLYAFDQDQNAIDNAQ 65
Query: 176 AHLNSLLHGQAHPHLKTH--TFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
L P+++ TF K NFRH+K L ++ + +D I DLG+SS Q+
Sbjct: 66 KRLA--------PYIEKGMVTFIKDNFRHLKERL----HDLGVTEIDGICYDLGVSSPQL 113
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ ERGFS D PLDMRM+ +A+L A +++N + E+ R+ +YGE+ + KI
Sbjct: 114 DQRERGFSYKKDAPLDMRMNQEANLTAYEVVNHYVYHELVRIFFKYGEDKFSKQIARKIE 173
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
QAR + + +T EL ++I+S P +++G A ++FQA+RI VNDEL + S+
Sbjct: 174 QAREQKPIETTTELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADESIQQ 231
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNINETW 410
D LA GR+ VI+FHSLEDR+ KQ F ++A E + L I DD
Sbjct: 232 AMDMLALDGRISVITFHSLEDRLTKQLF--------KEASTVEVPKGLPFIPDD------ 277
Query: 411 IRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++++++PI PS EE N R SAKLRV +KI
Sbjct: 278 -----LKPKMELVSRKPILPSKEELEANNRSHSAKLRVARKI 314
>gi|449107058|ref|ZP_21743717.1| ribosomal RNA small subunit methyltransferase H [Treponema
denticola ASLM]
gi|451968754|ref|ZP_21921983.1| ribosomal RNA small subunit methyltransferase H [Treponema
denticola US-Trep]
gi|448963196|gb|EMB43876.1| ribosomal RNA small subunit methyltransferase H [Treponema
denticola ASLM]
gi|451702767|gb|EMD57169.1| ribosomal RNA small subunit methyltransferase H [Treponema
denticola US-Trep]
Length = 315
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 126/345 (36%), Positives = 170/345 (49%), Gaps = 41/345 (11%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
Q H V+L E L+ + FVD TLG GH+ A ++ +P+L IGVD D S
Sbjct: 2 QPVHTSVLLEECLEFLKPDASDNLFVDGTLGEGGHTEAFLKRYPQLNA-IGVDADVSIQE 60
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDA-----ILMDLGM 227
+A+ L G+ I+ LG DE D+ IL+DLG+
Sbjct: 61 RAKERLKPF--GE---------------RIRFHLGWSDEFFKNYPKDSAPPNLILLDLGI 103
Query: 228 SSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLL 287
S RGFS D PLDMR++P+ L A DI+NS+ + ++ ++ YGEE +
Sbjct: 104 SMFHYVKSGRGFSFSSDEPLDMRLNPELRLSAADIVNSYNEKDLADLIFNYGEERYSRKI 163
Query: 288 QNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLE 347
++IV+ R + EL D I P + R G I AT+ FQALRIAVN EL L
Sbjct: 164 ASRIVEQRAAAAFSNAKELADCIYKAVP--QNYRHGKIHPATKTFQALRIAVNGELDRLP 221
Query: 348 SSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNIN 407
L A F LAP GRLGVI+FHSLEDRIVK F + + + I
Sbjct: 222 RLLEASFSVLAPNGRLGVITFHSLEDRIVKFYFKEL-----------GKSCTCPENMPIC 270
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ R ++LTK+ + S EE RLN RSA+LRV++KI
Sbjct: 271 KCGGRP-----RAEVLTKKAVKASDEEIRLNPPSRSARLRVVRKI 310
>gi|392960447|ref|ZP_10325915.1| Ribosomal RNA small subunit methyltransferase H [Pelosinus
fermentans DSM 17108]
gi|421054797|ref|ZP_15517762.1| S-adenosyl-methyltransferase MraW [Pelosinus fermentans B4]
gi|421058877|ref|ZP_15521522.1| Ribosomal RNA small subunit methyltransferase H [Pelosinus
fermentans B3]
gi|421066760|ref|ZP_15528320.1| Ribosomal RNA small subunit methyltransferase H [Pelosinus
fermentans A12]
gi|421071659|ref|ZP_15532775.1| Ribosomal RNA small subunit methyltransferase H [Pelosinus
fermentans A11]
gi|392440478|gb|EIW18158.1| S-adenosyl-methyltransferase MraW [Pelosinus fermentans B4]
gi|392446924|gb|EIW24195.1| Ribosomal RNA small subunit methyltransferase H [Pelosinus
fermentans A11]
gi|392453229|gb|EIW30116.1| Ribosomal RNA small subunit methyltransferase H [Pelosinus
fermentans A12]
gi|392455024|gb|EIW31831.1| Ribosomal RNA small subunit methyltransferase H [Pelosinus
fermentans DSM 17108]
gi|392459919|gb|EIW36279.1| Ribosomal RNA small subunit methyltransferase H [Pelosinus
fermentans B3]
Length = 312
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 125/343 (36%), Positives = 182/343 (53%), Gaps = 43/343 (12%)
Query: 116 HIPVMLGEVLDVFSSSRTITS----FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
H+ V+L E S S +T+ +VDCTLG +GH+ +++ IG+D DP+A+
Sbjct: 5 HVSVLLKE-----SVSALVTNPEGIYVDCTLGGSGHAEHVVKQLGTSGRFIGIDQDPAAI 59
Query: 172 AKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQ 231
+ L ++ + NF++I VL +++ N VD +L DLG+SS Q
Sbjct: 60 ETGKIKL-------SNSKCRVDIVQNNFQNIGLVLDELEVN----KVDGVLFDLGVSSHQ 108
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ ERGFS + D PLDMRM+P + A DI+N++ + ++ ++ YGEE + I
Sbjct: 109 LDIAERGFSYMQDAPLDMRMNPNSDFSAYDIVNNYSENQLTDIIITYGEERWAKRIAKFI 168
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
++ R + +TGELVD+I+ P RR G A R FQA+RI VN+EL L+ +
Sbjct: 169 IEFRSGKAIETTGELVDIIKRAIPSA-ARRDGP-HPAKRTFQAIRIEVNNELGILKDAFT 226
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEG--NEEELRNIRDDNINET 409
+ LA GGRL +I+FHSLEDRI KQT + A+G + L +N +
Sbjct: 227 TSIERLALGGRLCIITFHSLEDRIAKQTLQMM-------AKGCICPKALPICMCNNKPQI 279
Query: 410 WIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
KIL K PI PS E N R RSAKLRV +KI
Sbjct: 280 -----------KILGK-PIVPSVNELEENPRARSAKLRVAEKI 310
>gi|119717295|ref|YP_924260.1| S-adenosyl-methyltransferase MraW [Nocardioides sp. JS614]
gi|262824666|sp|A1SL88.1|RSMH_NOCSJ RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|119537956|gb|ABL82573.1| S-adenosyl-methyltransferase MraW [Nocardioides sp. JS614]
Length = 319
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 122/342 (35%), Positives = 180/342 (52%), Gaps = 39/342 (11%)
Query: 115 SHIPVMLGEVLDVFSS--SRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
SH+PV+L V+ + + R + VD TLG GH+ A++ +L +G+D DP ALA
Sbjct: 5 SHVPVLLDRVVALLAPPLEREGSVLVDATLGLGGHTEAVLTRF-DLARVVGIDRDPEALA 63
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG---VDAILMDLGMSS 229
L G+ + F F + +V ++ + + R G VDA+L DLG+SS
Sbjct: 64 ---------LAGR-----RLAPFGDRFTGVHAVYDELPDVLARLGLDAVDAVLFDLGVSS 109
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
MQ++ ERGF+ D PLDMRMD A D+LN++ A++ R+LREYGEE +
Sbjct: 110 MQLDVRERGFAYAEDAPLDMRMDGSTGPTAADVLNTYAAADLARILREYGEERFARKIAA 169
Query: 290 KIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESS 349
+V+ R + +G LV+L+ + P RR G A R FQALR+ VNDEL L +
Sbjct: 170 AVVRERAKEPFTRSGRLVELLYAEIPAP-ARRTGG-HPAKRTFQALRMEVNDELAVLRRA 227
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINET 409
+ A D + GGR+ V S+HSLEDR+VKQ F++ +R D E+L + +E
Sbjct: 228 IPAAIDAIGVGGRVVVESYHSLEDRLVKQAFVA---ASRLDV---PEDLPFV--PAGHEP 279
Query: 410 WIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+R + +G EE LN R S +LR I++
Sbjct: 280 ALRLVTRGAEKA---------GPEEIALNPRAASVRLRAIER 312
>gi|449128284|ref|ZP_21764531.1| ribosomal RNA small subunit methyltransferase H [Treponema
denticola SP33]
gi|448941617|gb|EMB22518.1| ribosomal RNA small subunit methyltransferase H [Treponema
denticola SP33]
Length = 315
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 126/345 (36%), Positives = 170/345 (49%), Gaps = 41/345 (11%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
Q H V+L E L+ + FVD TLG GH+ A ++ +P+L IGVD D S
Sbjct: 2 QPVHTSVLLEECLEFLKPDVSDNLFVDGTLGEGGHTEAFLKRYPQLNA-IGVDADVSIQE 60
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDA-----ILMDLGM 227
+A+ L G+ I+ LG DE D+ IL+DLG+
Sbjct: 61 RAKERLKPF--GE---------------RIRFHLGWSDEFFKNYPKDSAPPNLILLDLGI 103
Query: 228 SSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLL 287
S RGFS D PLDMR++P+ L A DI+NS+ + ++ ++ YGEE +
Sbjct: 104 SMFHYVKSGRGFSFSSDEPLDMRLNPELRLSASDIVNSYNEKDLADLIFNYGEERYSRKI 163
Query: 288 QNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLE 347
++IV+ R + EL D I P + R G I AT+ FQALRIAVN EL L
Sbjct: 164 ASRIVEQRAASAFSNAKELADCIYKAVP--QNYRHGKIHPATKTFQALRIAVNGELDRLP 221
Query: 348 SSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNIN 407
L A F LAP GRLGVI+FHSLEDRIVK F + + + I
Sbjct: 222 RLLEAAFSVLAPNGRLGVITFHSLEDRIVKFYFKEL-----------GKSCTCPENMPIC 270
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ R ++LTK+ + S EE RLN RSA+LRV++KI
Sbjct: 271 KCGGRP-----KAEVLTKKAVKASDEEIRLNPPSRSARLRVVRKI 310
>gi|339632196|ref|YP_004723838.1| hypothetical protein MAF_21780 [Mycobacterium africanum GM041182]
gi|339331552|emb|CCC27248.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
Length = 396
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 108/276 (39%), Positives = 153/276 (55%), Gaps = 18/276 (6%)
Query: 116 HIPVMLGEVLDVFSSSRT-------ITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDP 168
H+PV+ ++ + + T +D T+GA GH+ + P L+L IG+D DP
Sbjct: 65 HVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRL-IGLDRDP 123
Query: 169 SALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMS 228
+AL AR+ L H + + + + L + D + S VD IL DLG+S
Sbjct: 124 TALDVARSRLVRFADRLTLVHTR-------YDCLGAALAESDYAAVGS-VDGILFDLGVS 175
Query: 229 SMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQ 288
SMQ++ ERGF+ D PLDMRMDP L A DI+N++ +A + +LR YGEE +
Sbjct: 176 SMQLDRAERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIA 235
Query: 289 NKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLES 348
IV+ R + ST ELV L+ P RR G A R FQALRIAVNDEL++L +
Sbjct: 236 AGIVRRRAKTPFTSTAELVALLYQAIPAP-ARRVGG-HPAKRTFQALRIAVNDELESLRT 293
Query: 349 SLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSII 384
++ A D LA GGR+ V+++ SLEDRIVK+ F +
Sbjct: 294 AVPAALDALAIGGRIAVLAYQSLEDRIVKRVFAEAV 329
>gi|331703577|ref|YP_004400264.1| S adenosyl methyltransferase MraW [Mycoplasma mycoides subsp. capri
LC str. 95010]
gi|328802132|emb|CBW54286.1| S adenosyl methyltransferase MraW [Mycoplasma mycoides subsp. capri
LC str. 95010]
Length = 308
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 123/340 (36%), Positives = 188/340 (55%), Gaps = 40/340 (11%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HIPV+L E ++ + + + +VDCTLG AGHSS I++ + +D D A+ +A+
Sbjct: 4 HIPVLLKESIE-YLNIKPDGIYVDCTLGRAGHSSEILKRLNQKGFLYAIDQDQIAIDQAK 62
Query: 176 AHL----NSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQ 231
L N+ L Q NF ++ ++L I+ VD IL DLG+SS Q
Sbjct: 63 EKLEQINNNFLLIQG-----------NFSNLSALLA-INHVF---NVDGILYDLGVSSPQ 107
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ RGFS DGPLDMRMD ++L A ++N++ ++++ +L +YGEES + KI
Sbjct: 108 IDIASRGFSYKMDGPLDMRMDLNSTLTAHQVINTYSESQISEILFKYGEESFSKSISKKI 167
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
V++R ++ST ELV++I+S P +++ A + FQALRI +N+EL LE+SL
Sbjct: 168 VESR---PINSTLELVEIIKSALPQKVLKQKKH--PAKKTFQALRIYINNELIALENSLK 222
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
D L R+ VI+FHSLE++IVK F + ++ +E N I+ D +N +
Sbjct: 223 QALDLLNSKARICVITFHSLEEKIVKNIFNNSTNYYQEQLLSN----LPIKAD-LNSKF- 276
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
K++ K+PI PS E N R SAKL VI+K
Sbjct: 277 ---------KLVIKKPIKPSLLELEQNHRSHSAKLWVIEK 307
>gi|312871660|ref|ZP_07731752.1| S-adenosyl-methyltransferase MraW [Lactobacillus iners LEAF
3008A-a]
gi|311092885|gb|EFQ51237.1| S-adenosyl-methyltransferase MraW [Lactobacillus iners LEAF
3008A-a]
Length = 315
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 123/340 (36%), Positives = 174/340 (51%), Gaps = 32/340 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + + +VD T G GH+S +++ L IG D D A+ A+
Sbjct: 5 HYSVLLHETIDNLNL-KNDGVYVDATFGGGGHASYLLKQLSNGHL-IGFDQDEYAIELAK 62
Query: 176 AHLNSLLHGQAHPHLK-THTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+ +L + P L H N + + LG ID G+D I DLG+SS Q +
Sbjct: 63 KSFSEVLKANSKPQLSLVHDNFGNLQQNLAKLGFID------GIDGIYYDLGVSSPQFDQ 116
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
PERGFS + LDMRMD L A I+N+W E+ +L +YG+E + IV
Sbjct: 117 PERGFSYRFNARLDMRMDQTKDLDAYKIVNTWSQKELSNILFKYGDEKYARQIAKNIVAK 176
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +T ELVD+I+ P RR G A + FQA+RIAVNDEL+ LE SL
Sbjct: 177 RAIKPITTTFELVDIIKEAIPAF-ARRTGG-HPAKKSFQAIRIAVNDELEVLEKSLLEAI 234
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTF--LSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
+ L PGGR+ VI+F SLED+IVK+ F S +D R + D++ T
Sbjct: 235 EILKPGGRICVITFQSLEDKIVKKIFKKYSDVDIPRGMPQ---------VPDSLKPTL-- 283
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
KI++++PI + +E N R SAKLRV +K+
Sbjct: 284 --------KIISRKPIVATNKELEENNRSHSAKLRVAEKL 315
>gi|450110112|ref|ZP_21861926.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans SM6]
gi|449225518|gb|EMC25113.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans SM6]
Length = 316
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 124/339 (36%), Positives = 176/339 (51%), Gaps = 33/339 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+L E +D+ + +VD TLG AGHS ++ + D D A+ A+
Sbjct: 7 HITVLLHETIDMLDI-KPDGIYVDATLGGAGHSECLLSKLGKEGHLYCFDQDQKAIDNAK 65
Query: 176 AHLNSLLH-GQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
L + GQ +F K NFRH+KS L DE I +D I DLG+SS Q++
Sbjct: 66 IRLQQYVKTGQV-------SFIKDNFRHLKSHLA--DEGIYE--IDGICYDLGVSSPQLD 114
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
ERGFS D PLDMRM+ A L A D++N++ ++ R+ +YGE+ + KI
Sbjct: 115 ERERGFSYKKDAPLDMRMNQDAQLTAFDVVNTYDYRDLVRLFFKYGEDKFSKQIARKIES 174
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +T EL ++I+S P +++G A ++FQA+RI VNDEL E SL
Sbjct: 175 ARKEKLIETTAELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAAEESLTQA 232
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
D LA GR+ VI+FHSLEDR+ KQ F + D ++ +
Sbjct: 233 LDLLALNGRISVITFHSLEDRLTKQLFKEV----------------TTLDVPKGLPFVPE 276
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+Q ++ ++PI P+A E N R SAKLRVIQKI
Sbjct: 277 NLQP-KFSLVNRKPILPNARELSENNRAHSAKLRVIQKI 314
>gi|312863799|ref|ZP_07724037.1| S-adenosyl-methyltransferase MraW [Streptococcus vestibularis
F0396]
gi|311101335|gb|EFQ59540.1| S-adenosyl-methyltransferase MraW [Streptococcus vestibularis
F0396]
Length = 316
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 123/341 (36%), Positives = 180/341 (52%), Gaps = 37/341 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG AGHSS ++ E D D A+ A+
Sbjct: 7 HVTVLLHETVDMLDI-KPDGIYVDATLGGAGHSSYLLSQLSEKGHLYCFDQDQKAIDNAQ 65
Query: 176 AHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
L + G TF K NFR+++S L E + +D IL DLG+SS Q++
Sbjct: 66 VRLKDYIDKGMV-------TFIKDNFRNLRSNL----EALGVFEIDGILYDLGVSSPQLD 114
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
ERGFS D LDMRM+ +ASL A D++N++P ++ R+ +YGE+ + KI Q
Sbjct: 115 ERERGFSYKQDAKLDMRMNEEASLTAYDVVNTYPYNDLVRIFFKYGEDKFSKQIARKIEQ 174
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +T EL ++I+S P +++G A ++FQA+RI VNDEL + S+
Sbjct: 175 ARQVKPIETTTELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADESIQEA 232
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTF--LSIIDHNREDAEGNEEELRNIRDDNINETWI 411
D LA GR+ VI+FHSLEDR+ KQ F S +D + +I
Sbjct: 233 LDLLAVDGRISVITFHSLEDRLTKQLFKEASTVDVPK------------------GLPFI 274
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ +Q ++ ++PI PS EE N R SAKLRV +KI
Sbjct: 275 PEDLQPKVA-LVNRKPILPSQEELEANNRSHSAKLRVAKKI 314
>gi|403254482|ref|XP_003919995.1| PREDICTED: probable methyltransferase-like protein 15-like [Saimiri
boliviensis boliviensis]
Length = 406
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 134/417 (32%), Positives = 214/417 (51%), Gaps = 48/417 (11%)
Query: 53 AGVAVFTTFPFRAANDSKNKKVAKAKATSARVGVGMGLVKEKRRTRSNKDYDYESIIQQQ 112
+G+ +P R +N KV +A + + + + ++D ++E++++
Sbjct: 21 SGIPNLAIWPKRIHTTEENYKVYEAHEQTDQT--------QAQELYKSQDRNFETMVK-- 70
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
HIPVM+ EV+ S + F+D T G+ GH+ AI++ ++ L+ +D DP+A A
Sbjct: 71 --LHIPVMVDEVVHCLSPQKG-QIFLDMTFGSGGHTKAILQKESDIVLY-ALDRDPTAYA 126
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGV-----DAILMDLGM 227
A HL+ L + K R + Q + ++++ V D +LMDLG
Sbjct: 127 LAE-HLSEL-------------YPKQIRAMLGRFSQAETLLMKAEVQPGTFDGVLMDLGC 172
Query: 228 SSMQVNNPERGFSVLGDGPLDMRMD----PQASLKAEDILNSWPDAEVGRVLREYGEESN 283
SSMQ++ ERGFS+ DGPLDMRMD P A D++N+ + +LR YGEE +
Sbjct: 173 SSMQLDTSERGFSLRKDGPLDMRMDGDRYPDMP-TAADVVNALDQQALASILRAYGEEKH 231
Query: 284 WHLLQNKIVQARLRGGLHSTGELVDLIQSVTP--GMRGRR---QGWIKTATRVFQALRIA 338
+ + IVQAR + T +L ++ P + R+ Q AT+ FQALRI
Sbjct: 232 AKKIASAIVQARSIYPITRTQQLASIVAGAFPPSAIYARKDLLQRSTHIATKTFQALRIF 291
Query: 339 VNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEEL 398
VN+EL L + L L PGGRL +SFHSLEDRIVK+ L I R + ++ +
Sbjct: 292 VNNELNELHTGLKTAQKFLRPGGRLVALSFHSLEDRIVKRFLLGISMTERFNLSVRQQVM 351
Query: 399 R--NIRDDNIN-ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ + D+ N E +R+ W ++L K+ ++P +++ + N R RSAKLR K+
Sbjct: 352 KASQLGSDHENMEVSMRRAPLMW--ELLHKKVLSPQSQDIQDNPRGRSAKLRAAIKL 406
>gi|381165611|ref|ZP_09874838.1| S-adenosyl-dependent methyl transferase [Phaeospirillum
molischianum DSM 120]
gi|380685101|emb|CCG39650.1| S-adenosyl-dependent methyl transferase [Phaeospirillum
molischianum DSM 120]
Length = 322
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 114/264 (43%), Positives = 152/264 (57%), Gaps = 18/264 (6%)
Query: 114 SSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAK 173
+ H+PV+L EV+ ++D T GA G+S AI+ A +L G+D DP+A +
Sbjct: 4 APHLPVLLTEVIAAMEPHDG-GRYLDGTFGAGGYSRAILTAASGCRL-TGLDRDPTAAVR 61
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
R L + +P T A F + S+LG+ G+D I++D+G+SSMQ++
Sbjct: 62 GR-DLTA-----EYPDRFTF-LAGRFGEMASLLGEDGSG----GLDGIVLDIGVSSMQID 110
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
ERGFS DGPLDMRM+ +A A DI+N+ P+A++ +L YGEE + IV+
Sbjct: 111 EAERGFSFSKDGPLDMRME-RAGPDAADIVNTTPEADLANILYRYGEERLSRRIARAIVE 169
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR TGEL L++ V P R I ATR FQALRIAVNDEL LE L A
Sbjct: 170 ARKVQPFSRTGELATLVRKVVP----RHPDGIDPATRTFQALRIAVNDELGELERGLAAA 225
Query: 354 FDCLAPGGRLGVISFHSLEDRIVK 377
LAPGGRL V++FHSLEDRIVK
Sbjct: 226 ETLLAPGGRLVVVTFHSLEDRIVK 249
>gi|57234909|ref|YP_181088.1| S-adenosyl-methyltransferase MraW [Dehalococcoides ethenogenes 195]
gi|88909197|sp|Q3Z9L1.1|RSMH_DEHE1 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|57225357|gb|AAW40414.1| S-adenosyl-methyltransferase MraW [Dehalococcoides ethenogenes 195]
Length = 349
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 133/341 (39%), Positives = 181/341 (53%), Gaps = 43/341 (12%)
Query: 116 HIPVMLGEV---LDVFSSSRTITSFVDCTLGAAGHSSAIIR-AHPELKLHIGVDVDPSAL 171
HIPVML E L V R +VDCTLGA GHS AI+ ++P +L + +D DP A+
Sbjct: 6 HIPVMLEESIQGLGVIPGGR----YVDCTLGAGGHSEAILEHSYPGGQL-LSIDADPKAI 60
Query: 172 AKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQ 231
A A L G + NF ++K + + + V IL DLG+SSMQ
Sbjct: 61 ALAAERLKCF--GSS-----VLLVNDNFANLKDICQRYE----YMPVHGILFDLGLSSMQ 109
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ E GFS + PLDMR P L A DI+N++ A + ++ +YGEE + I
Sbjct: 110 LDREESGFSFQTEAPLDMRFSPGQELSAADIVNTYDLAGLSDLIWKYGEEPFSRRIARAI 169
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
++ R +T EL +I+ G R G I ATR FQALRIAVN+EL LES+L
Sbjct: 170 LEKR---PFKTTTELASVIEKAVGG----RHGRIHPATRTFQALRIAVNEELSHLESALA 222
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
L GGRL VIS+HSLEDRIVKQ F +++A+G I D+I +
Sbjct: 223 QAQSLLGHGGRLVVISYHSLEDRIVKQYF-------QKEAKG------CICPDDIPQCVC 269
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ +++ +R ITPS EE N R RSAK+RV ++I
Sbjct: 270 N---HKPSLRLINRRVITPSDEEISRNPRSRSAKMRVAERI 307
>gi|271964366|ref|YP_003338562.1| S-adenosylmethionine-dependent methyltransferase [Streptosporangium
roseum DSM 43021]
gi|270507541|gb|ACZ85819.1| S-adenosylmethionine-dependentmethyltransferase [Streptosporangium
roseum DSM 43021]
Length = 330
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 104/270 (38%), Positives = 153/270 (56%), Gaps = 22/270 (8%)
Query: 116 HIPVMLGEVLDVFSSSRT--ITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAK 173
H+PVML VL++ + + VD LG GH+ A++ AHP L L IG+D DP+A+ +
Sbjct: 16 HVPVMLERVLELLAPALAGPAPVVVDANLGLGGHAEALLAAHPSLHL-IGIDRDPTAIER 74
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG---VDAILMDLGMSSM 230
+ A L +A+ +++V ++ E + +G VDA+L DLG+SS
Sbjct: 75 STARLAP--------------YAERTTLVRAVSDELTEVLAEAGRPRVDAVLFDLGVSSP 120
Query: 231 QVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNK 290
Q++ ERGF+ D PLDMRMD L AE ++N++ AE+ R+LR+YGEE +
Sbjct: 121 QLDEAERGFAYSYDAPLDMRMDRDQELTAEIVVNTYSAAELIRILRDYGEERFAPRVARL 180
Query: 291 IVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSL 350
I++ R + ST L +++++ P R G A R FQALRI VN EL LE +L
Sbjct: 181 IIKERGNEAITSTKRLAEIVRTAIPAATRRTGG--NPAKRTFQALRIEVNAELTALERAL 238
Query: 351 HACFDCLAPGGRLGVISFHSLEDRIVKQTF 380
A D L GGR+ V+++HSLEDR+ KQ
Sbjct: 239 PAALDALTLGGRVVVLAYHSLEDRLTKQVL 268
>gi|241888447|ref|ZP_04775758.1| S-adenosyl-methyltransferase MraW [Gemella haemolysans ATCC 10379]
gi|241864889|gb|EER69260.1| S-adenosyl-methyltransferase MraW [Gemella haemolysans ATCC 10379]
Length = 311
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 121/319 (37%), Positives = 164/319 (51%), Gaps = 40/319 (12%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
+VDCTLG AGHS I++ KL+ D D AL A+ L A K
Sbjct: 24 YVDCTLGGAGHSLEILKRLKNGKLY-AFDQDNVALENAKEKL-------AEYSDKVVFIK 75
Query: 197 KNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQAS 256
NF ++K L + N VD +L DLG+SS Q++ PERGFS D LDMRMD A
Sbjct: 76 SNFVNLKEKLAEHGVN----EVDGVLYDLGVSSPQLDTPERGFSYNYDTRLDMRMDTDAK 131
Query: 257 LKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPG 316
+ A +++N + ++ ++ YGEE+ + I + R + + +T ELV++I+ P
Sbjct: 132 ISAYEVVNEYSYHDLVKIFYRYGEENFSKQIARNIEKKREQKPIETTFELVEIIKESIPA 191
Query: 317 MRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIV 376
+ R G A RVFQA+RIAVN+EL E SL D ++ GGR+ VI+FHSLEDRI
Sbjct: 192 AKRRTGGH--PAKRVFQAIRIAVNNELSVFEDSLEQAIDIVSVGGRISVITFHSLEDRIC 249
Query: 377 KQTFLSIIDHNREDAEGN-----EEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPS 431
KQ F S +D N EE L + K++T++PI PS
Sbjct: 250 KQIFNSY--SKSKDIPKNLPIMPEESLSKL-------------------KVITRKPIYPS 288
Query: 432 AEEERLNCRCRSAKLRVIQ 450
E N R RSAKLRV Q
Sbjct: 289 DIELEENNRSRSAKLRVAQ 307
>gi|449900310|ref|ZP_21791423.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans R221]
gi|449257434|gb|EMC55098.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans R221]
Length = 316
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 124/339 (36%), Positives = 176/339 (51%), Gaps = 33/339 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+L E +D+ + +VD TLG AGHS ++ + D D A+ A+
Sbjct: 7 HITVLLHETIDMLDI-KPDGIYVDATLGGAGHSECLLSKLGKEGHLYCFDQDQKAIDNAK 65
Query: 176 AHLNSLLH-GQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
L + GQ +F K NFRH+KS L DE I +D I DLG+SS Q++
Sbjct: 66 IRLQQYVKTGQV-------SFIKDNFRHLKSRLA--DEGIYE--IDGICYDLGVSSPQLD 114
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
ERGFS D PLDMRM+ A L A D++N++ ++ R+ +YGE+ + KI
Sbjct: 115 ERERGFSYKKDAPLDMRMNQDAQLTAFDVVNTYDYRDLVRLFFKYGEDKFSKQIARKIES 174
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +T EL ++I+S P +++G A ++FQA+RI VNDEL E SL
Sbjct: 175 ARKEKLIETTAELAEIIKSAKPTKELKKKGH--PAKQIFQAIRIEVNDELGAAEESLTQA 232
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
D LA GR+ VI+FHSLEDR+ KQ F + D ++ +
Sbjct: 233 LDLLALNGRIAVITFHSLEDRLTKQLFKEV----------------TTLDVPKGLPFVPE 276
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+Q ++ ++PI P+A E N R SAKLRVIQKI
Sbjct: 277 NLQP-KFSLVNRKPILPNARELSENNRAHSAKLRVIQKI 314
>gi|429199295|ref|ZP_19191057.1| S-adenosyl-methyltransferase MraW [Streptomyces ipomoeae 91-03]
gi|428664990|gb|EKX64251.1| S-adenosyl-methyltransferase MraW [Streptomyces ipomoeae 91-03]
Length = 318
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 106/272 (38%), Positives = 151/272 (55%), Gaps = 22/272 (8%)
Query: 114 SSHIPVMLGEVLDVFSSSRTITS--FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
S H+PVML LD+ + + T VDCTLG GHS A++ PE++L + +D D AL
Sbjct: 4 SRHVPVMLQRCLDMLAPALTEPGAVVVDCTLGLGGHSEALLTRFPEVRL-VALDRDKEAL 62
Query: 172 AKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSV---LGQIDENILRSGVDAILMDLGMS 228
L G+ + F + + +V L + + + R V +L DLG+S
Sbjct: 63 R---------LSGE-----RLAPFGERATLVHAVYDELPDVLDRLARPRVQGVLFDLGVS 108
Query: 229 SMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQ 288
SMQ++ +RGF+ D PLDMRMD + A ++LN++P E+ R+LR YGEE +
Sbjct: 109 SMQLDEADRGFAYAQDAPLDMRMDQTTGISAAEVLNTYPAGELVRILRTYGEEKQAKRIV 168
Query: 289 NKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLES 348
+ IV+ R + ++ LV+LI+ P R G A R FQALRI VN EL LE
Sbjct: 169 SAIVRERDKEPFTNSARLVELIRDALPQAAKRTGG--NPAKRTFQALRIEVNGELTVLER 226
Query: 349 SLHACFDCLAPGGRLGVISFHSLEDRIVKQTF 380
++ A LA GGR+ V+S+HSLEDR+VKQ F
Sbjct: 227 AIPAAVKALAVGGRIAVLSYHSLEDRLVKQVF 258
>gi|270291462|ref|ZP_06197684.1| methylase MraW [Pediococcus acidilactici 7_4]
gi|304385176|ref|ZP_07367522.1| S-adenosyl-methyltransferase MraW [Pediococcus acidilactici DSM
20284]
gi|418069460|ref|ZP_12706738.1| 16S rRNA m(4)C1402 methyltransferase [Pediococcus acidilactici
MA18/5M]
gi|270280308|gb|EFA26144.1| methylase MraW [Pediococcus acidilactici 7_4]
gi|304329370|gb|EFL96590.1| S-adenosyl-methyltransferase MraW [Pediococcus acidilactici DSM
20284]
gi|357536929|gb|EHJ20957.1| 16S rRNA m(4)C1402 methyltransferase [Pediococcus acidilactici
MA18/5M]
Length = 317
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 121/320 (37%), Positives = 168/320 (52%), Gaps = 35/320 (10%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
+VDCTLG GHS I+ D D +A+ + HL + Q +K
Sbjct: 26 YVDCTLGGGGHSQLILSKLGSTGHLYSFDQDQTAIDYNQDHLAPYIANQQVTFIKA---- 81
Query: 197 KNFRHIKSVLGQ--IDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQ 254
NFR++K+ L Q ID VD IL DLG+SS Q ++ +RGFS D PLDMRMD
Sbjct: 82 -NFRNLKNELNQRGIDH------VDGILYDLGVSSPQFDDAQRGFSYRYDAPLDMRMDQS 134
Query: 255 ASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVT 314
L A+ ++N W ++ R+ YGEE + +I + R + + +TGELV++I+
Sbjct: 135 QELTAQAVVNEWSYNDLVRIFFRYGEEKYAKQVARRIEKVREQHPIVTTGELVEIIKEAI 194
Query: 315 PGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDR 374
P RR G A RVFQA+RIAVNDEL LE SL D L GR+ VI+F SLEDR
Sbjct: 195 PAA-ARRTGG-HPAKRVFQAIRIAVNDELGALEESLEQALDLLNDNGRISVITFQSLEDR 252
Query: 375 IVKQTFLSIIDHNREDAEGNE--EELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSA 432
+VK+ F +E E + L I D + + K++ ++PI PS
Sbjct: 253 LVKRMF-------KEKTEIGDLPAGLPVIPAD-----------KKPHFKLVNRKPIVPSE 294
Query: 433 EEERLNCRCRSAKLRVIQKI 452
+E + N R SAKLR+I+K+
Sbjct: 295 DELKENRRAHSAKLRIIEKL 314
>gi|315504598|ref|YP_004083485.1| s-adenosyl-methyltransferase mraw [Micromonospora sp. L5]
gi|315411217|gb|ADU09334.1| S-adenosyl-methyltransferase MraW [Micromonospora sp. L5]
Length = 391
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 117/352 (33%), Positives = 180/352 (51%), Gaps = 44/352 (12%)
Query: 109 IQQQQSSHIPVMLGEVLDVFSSS-----RTITSFVDCTLGAAGHSSAIIRAHPELKLHIG 163
+ + + +H+PV+L L++ + + RT+ VD TLG AGH+ A++ AHP+ L IG
Sbjct: 23 MGELRGTHVPVLLERCLELLAPALGRPGRTV--HVDATLGLAGHAEAVLSAHPDTVL-IG 79
Query: 164 VDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG---VDA 220
+D D ALA AR L FA +V ++ E + R G +D
Sbjct: 80 LDRDTEALAHARVRLAR--------------FADRIHLEHAVYDELPEVLDRLGYPAIDG 125
Query: 221 ILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGE 280
+L DLG+SS+Q++ P+RGF+ D PLDMRMD + AE+++N++ ++ R+LR YGE
Sbjct: 126 VLFDLGVSSLQLDAPDRGFAYAQDAPLDMRMDQTRGVTAEEVVNTYSHPDLARLLRVYGE 185
Query: 281 ESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVN 340
E + + I++ R R + S+ L +L++ P RR G A R FQALRI VN
Sbjct: 186 EKFAGKIASAIIRERERNRITSSARLAELVRDAIPAP-ARRTGG-HPAKRTFQALRIEVN 243
Query: 341 DELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRN 400
EL LE++L A D L GGR+ V+S+HSLEDR+ KQ
Sbjct: 244 RELAALETALPAALDKLTVGGRMVVLSYHSLEDRLTKQALAD-----------------R 286
Query: 401 IRDDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+R + + G ++L++ P E N R S +LR +++
Sbjct: 287 VRSKGPVDLPVELPGSGPTFRLLSRGAELPGEAEVAANPRAASVRLRAAERL 338
>gi|374990626|ref|YP_004966121.1| S-adenosyl-methyltransferase MraW [Streptomyces bingchenggensis
BCW-1]
gi|297161278|gb|ADI10990.1| S-adenosyl-methyltransferase MraW [Streptomyces bingchenggensis
BCW-1]
Length = 320
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 109/270 (40%), Positives = 153/270 (56%), Gaps = 22/270 (8%)
Query: 116 HIPVMLGEVLDVFSSS--RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAK 173
H+PVML LD+ + + R VDCTLG GHS A++R PE +L + +D DP+AL
Sbjct: 7 HVPVMLQRCLDMLAPALERPGAVVVDCTLGLGGHSEALLRTFPEARL-VALDRDPAALEL 65
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG---VDAILMDLGMSSM 230
+ A L P+ T + +V ++ E + R G V IL DLG+SSM
Sbjct: 66 SGARLA--------PYGDRATL------VHAVYDELPEVLARLGIPRVQGILFDLGVSSM 111
Query: 231 QVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNK 290
Q++ ERGF+ D PLDMRMD + A ++LN++P E+ R+LR YGEE + +
Sbjct: 112 QLDEAERGFAYAQDAPLDMRMDQTTGISAAEVLNTYPPGELVRILRTYGEEKFARKIVDA 171
Query: 291 IVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSL 350
+V+ R + H++ LV+LI++ P R G A R FQALRI VN EL LE ++
Sbjct: 172 VVRERAKEPFHNSARLVELIRAALPQAAKRTGG--NPAKRTFQALRIEVNGELTVLERAI 229
Query: 351 HACFDCLAPGGRLGVISFHSLEDRIVKQTF 380
A LA GGR+ V+S+HSLEDR+VK
Sbjct: 230 PAAVAALAVGGRIAVLSYHSLEDRLVKHVL 259
>gi|433608661|ref|YP_007041030.1| Ribosomal RNA small subunit methyltransferase H [Saccharothrix
espanaensis DSM 44229]
gi|407886514|emb|CCH34157.1| Ribosomal RNA small subunit methyltransferase H [Saccharothrix
espanaensis DSM 44229]
Length = 320
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 105/274 (38%), Positives = 153/274 (55%), Gaps = 20/274 (7%)
Query: 112 QQSSHIPVMLGEVLDVFSSSRTITS--FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPS 169
+++ H+PV+L VL + + FVDCTLG GHS A+++AHP ++L IG+D DP
Sbjct: 9 ERARHVPVLLDRVLGLLDPALADRDAVFVDCTLGLGGHSEAVLKAHPRVRL-IGLDRDPQ 67
Query: 170 ALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSS 229
A+A +R L P+ TF + + +D VD +LMDLG+SS
Sbjct: 68 AIALSRERLA--------PYADRVTFVQT--TYDGIADAVD-----GPVDGVLMDLGVSS 112
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
+Q++ ERGF+ D PLDMRM + A D+LN + ++ R+LR+YGEE +
Sbjct: 113 LQLDAEERGFAYSRDSPLDMRMSAGTGMTAADVLNEYSVDDLTRILRDYGEERFARKIAG 172
Query: 290 KIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESS 349
+V+ R R ++G LV+L+ P R G A R FQALRI VN EL++L +
Sbjct: 173 AVVRERAREPFTTSGRLVELLYDSVPAATRRTGGH--PAKRTFQALRIEVNGELESLRLA 230
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSI 383
L A LA GGR+ V ++ SLEDR+VK+ F +
Sbjct: 231 LPAALSVLAVGGRIVVEAYQSLEDRMVKRAFAEL 264
>gi|302868932|ref|YP_003837569.1| S-adenosyl-methyltransferase MraW [Micromonospora aurantiaca ATCC
27029]
gi|302571791|gb|ADL47993.1| S-adenosyl-methyltransferase MraW [Micromonospora aurantiaca ATCC
27029]
Length = 391
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 117/348 (33%), Positives = 178/348 (51%), Gaps = 44/348 (12%)
Query: 113 QSSHIPVMLGEVLDVFSSS-----RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVD 167
+ +H+PV+L L++ + + RT+ VD TLG AGH+ A++ AHP+ L IG+D D
Sbjct: 27 RGTHVPVLLERCLELLAPALGRPGRTV--HVDATLGLAGHAEAVLSAHPDTVL-IGLDRD 83
Query: 168 PSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG---VDAILMD 224
ALA AR L FA +V ++ E + R G +D +L D
Sbjct: 84 TEALAHARVRLAR--------------FADRIHLEHAVYDELPEVLDRLGYPAIDGVLFD 129
Query: 225 LGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNW 284
LG+SS+Q++ P+RGF+ D PLDMRMD + AE+++N++ ++ R+LR YGEE
Sbjct: 130 LGVSSLQLDAPDRGFAYAQDAPLDMRMDQTRGVTAEEVVNTYSHPDLARLLRVYGEEKFA 189
Query: 285 HLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELK 344
+ + I++ R R + S+ L +L++ P RR G A R FQALRI VN EL
Sbjct: 190 GKIASAIIRERERNRITSSARLAELVRDAIPAP-ARRTGG-HPAKRTFQALRIEVNRELA 247
Query: 345 TLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDD 404
LE++L A D L GGR+ V+S+HSLEDR+ KQ +R
Sbjct: 248 ALETALPAALDKLTVGGRMVVLSYHSLEDRLTKQALAD-----------------RVRSK 290
Query: 405 NINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ + G ++L++ P E N R S +LR +++
Sbjct: 291 GPVDLPVELPGSGPTFRLLSRGAELPGEAEVAANPRAASVRLRAAERL 338
>gi|410944690|ref|ZP_11376431.1| SAM-dependent methytransferase [Gluconobacter frateurii NBRC
101659]
Length = 323
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 121/335 (36%), Positives = 175/335 (52%), Gaps = 38/335 (11%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+PVML EVL+ S R ++D T G G++ AI+ + + LH G+D DP+A+A+
Sbjct: 11 HVPVMLKEVLEALSP-RDGGRYLDGTFGGGGYARAILNSA-DCTLH-GIDRDPTAIARGE 67
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG-VDAILMDLGMSSMQVNN 234
A + QA+ L H + G ++E + + G D I++DLG+SS Q++
Sbjct: 68 A-----MAQQANGRLIMH---------QGTFGNMEELVGQDGPFDGIVLDLGVSSFQIDQ 113
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS DGPLDMRM A D++NS ++++ VL YGEE + IV A
Sbjct: 114 AERGFSFRNDGPLDMRMGTDGP-SAADLVNSMKESDLADVLYRYGEEKLSRRIARAIVTA 172
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +TG L +++S P R + I ATR FQ LRIAVNDEL LE +L A
Sbjct: 173 RAEEPITTTGRLAHIVRSCVPKDRSK----IDPATRSFQGLRIAVNDELGELERALEAAP 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
LAPGG V++FHSLEDR+ K+ + R + +R+
Sbjct: 229 CLLAPGGVFVVVTFHSLEDRLAKRAMAELAG-------------RTANPSRYDPAPVRKE 275
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVI 449
++ +L RP+ + EE R N R RSA+LR +
Sbjct: 276 PPVFS--LLHSRPLPATEEEARENPRARSARLRAL 308
>gi|354566343|ref|ZP_08985515.1| Ribosomal RNA small subunit methyltransferase H [Fischerella sp.
JSC-11]
gi|353545359|gb|EHC14810.1| Ribosomal RNA small subunit methyltransferase H [Fischerella sp.
JSC-11]
Length = 297
Score = 178 bits (451), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 127/345 (36%), Positives = 174/345 (50%), Gaps = 59/345 (17%)
Query: 109 IQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDP 168
I++ SHIPV+ V++ + R ++D T+G GH+ I+ A P++++ +D D
Sbjct: 10 IEEPAFSHIPVLPQAVIEGLAV-RAEGHYLDATVGGGGHTRLILEAAPDVRV-TAIDQDE 67
Query: 169 SALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMS 228
ALA A+ L G+ + T+ A F S IL DLG+S
Sbjct: 68 DALAAAQKELAEF--GERVTFIHTNFAAYEFPP--------------STFAGILADLGVS 111
Query: 229 SMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQ 288
S ++ RGFS + LDMRM+ Q SL A D++N W +AE+ + +YGEE +
Sbjct: 112 SYHLDTANRGFSFRHEANLDMRMNTQQSLTAADVINEWDEAELADIFFKYGEERLSRRIA 171
Query: 289 NKIVQARLRGGLHSTGELVDLI-QSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLE 347
+IV+ R +T EL I SV P R G I ATRVFQALRI VNDELK+LE
Sbjct: 172 KRIVEQR---PFETTTELAQAIAYSVPPKYR---YGRINPATRVFQALRIVVNDELKSLE 225
Query: 348 SSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNIN 407
+ + L PGGR+ +ISFHSLEDR+VK LRN
Sbjct: 226 TFVDKAPQALVPGGRIAIISFHSLEDRLVKHG------------------LRN------- 260
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++Q +LTK+PITP EE N R RSAKLRV Q++
Sbjct: 261 ----SPLLQ-----VLTKKPITPHEEEIVNNPRSRSAKLRVAQRV 296
>gi|387878733|ref|YP_006309036.1| S-adenosyl-methyltransferase MraW [Streptococcus parasanguinis
FW213]
gi|386792190|gb|AFJ25225.1| S-adenosyl-methyltransferase MraW [Streptococcus parasanguinis
FW213]
Length = 316
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 123/345 (35%), Positives = 182/345 (52%), Gaps = 37/345 (10%)
Query: 112 QQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
++ H+ V+L E +D+ + +VD TLG AGHS ++ E D D A+
Sbjct: 3 KEFHHVTVLLHETIDMLDV-KPDGIYVDATLGGAGHSEYLLTKLNESGHLYAFDQDQHAI 61
Query: 172 AKARAHLNSLLH-GQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSS 229
A+A L + G TF K NFRH+K L ++ + +D I DLG+SS
Sbjct: 62 ENAKARLAPFIEKGMV-------TFIKDNFRHLKERLN----DLGVTEIDGICYDLGVSS 110
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
Q++ ERGFS D PLDMRM+ +ASL A +++N++ ++ R+ +YGE+ +
Sbjct: 111 PQLDERERGFSYKKDAPLDMRMNQEASLTAYEVVNTYDYHDLVRIFFKYGEDKFSKQIAR 170
Query: 290 KIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESS 349
KI QAR + +T EL ++I+S P +++G A ++FQA+RI VNDEL + S
Sbjct: 171 KIEQARAIKPIETTTELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADES 228
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNIN 407
+ D LA GR+ VI+FHSLEDR+ KQ F ++A E + L I DD
Sbjct: 229 IQQAMDLLALDGRISVITFHSLEDRLTKQLF--------KEASTVEVPKGLPFIPDD--- 277
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+++ ++PI PS EE N R SAKLRV +KI
Sbjct: 278 --------LKPKMELINRKPILPSEEELEENNRSHSAKLRVARKI 314
>gi|154500741|ref|ZP_02038779.1| hypothetical protein BACCAP_04419 [Bacteroides capillosus ATCC
29799]
gi|150270630|gb|EDM97939.1| S-adenosyl-methyltransferase MraW [Pseudoflavonifractor capillosus
ATCC 29799]
Length = 313
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 132/345 (38%), Positives = 184/345 (53%), Gaps = 33/345 (9%)
Query: 109 IQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDP 168
+ + + SH PV+L E +D + T T +VD TLG AGHS I R +L I +D D
Sbjct: 1 MSEMEFSHKPVLLQECIDGLNIDPTGT-YVDATLGRAGHSREIARRLTTGRL-ICIDRDQ 58
Query: 169 SALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMS 228
+AL A L L+ H NF + +L ++ + L SGV L DLG+S
Sbjct: 59 AALDAAPGRLEGLMDRVTLVH-------GNFGDLADILDRLKLDKL-SGV---LADLGVS 107
Query: 229 SMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQ 288
S Q+++ RGFS + D PLDMRMD +L A ++N WP E+ R+L ++GEE +
Sbjct: 108 SPQLDDASRGFSYMADAPLDMRMDQSEALTARTVVNEWPQEEIRRILFQFGEERYAPAIA 167
Query: 289 NKIVQARLRGGLHSTGELVDLIQSVTPG-MRGRRQGWIKTATRVFQALRIAVNDELKTLE 347
IV+AR + + +T ELVD+I+S P +Q A R FQA+RIAVNDEL +
Sbjct: 168 AAIVRAREKAPIETTLELVDIIRSAMPAHALCEKQ---HPAKRSFQAIRIAVNDELSAAD 224
Query: 348 SSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNIN 407
+ A LAPGGRL +ISFHSLEDRIVK F + A+G D +
Sbjct: 225 KLIQAAVPALAPGGRLAIISFHSLEDRIVKNAFAAF-------AKG----CTCPPDFPVC 273
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ +I +++ K+PI EE N R RSAKLR+ +K+
Sbjct: 274 VCGKKPVI-----RLVNKKPIVSGEEELNENARARSAKLRIAEKL 313
>gi|270307713|ref|YP_003329771.1| S-adenosyl-methyltransferase [Dehalococcoides sp. VS]
gi|270153605|gb|ACZ61443.1| S-adenosyl-methyltransferase [Dehalococcoides sp. VS]
Length = 349
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 134/341 (39%), Positives = 180/341 (52%), Gaps = 43/341 (12%)
Query: 116 HIPVMLGEV---LDVFSSSRTITSFVDCTLGAAGHSSAIIR-AHPELKLHIGVDVDPSAL 171
HIPVML E L V R +VDCTLGA GHS AI+ ++P +L + +D DP A+
Sbjct: 6 HIPVMLEESIQGLGVIPGGR----YVDCTLGAGGHSEAILEHSYPGGQL-LSIDADPKAI 60
Query: 172 AKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQ 231
A A L G + NF ++K + + + V IL DLG+SSMQ
Sbjct: 61 ALAAERLKGF--GSS-----VLLVNDNFANLKDICQRYE----YMPVHGILFDLGLSSMQ 109
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ E GFS + PLDMR P L A DI+N++ A + ++ +YGEE + I
Sbjct: 110 LDREESGFSFQTEAPLDMRFSPGQELSAADIVNTYGLAGLSDLIWKYGEEPFSRRIARAI 169
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
++ R +T EL +I+ G R G I ATR FQALRIAVN+EL LES+L
Sbjct: 170 LEKR---PFKTTTELASVIEKAVGG----RHGRIHPATRTFQALRIAVNEELSHLESALA 222
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
L GGRL VIS+HSLEDRIVKQ F + +A+G I D+I +
Sbjct: 223 QAQSLLGHGGRLVVISYHSLEDRIVKQYF-------QREAKG------CICPDDIPQCVC 269
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ +I+ +R ITPS EE N R RSAK+RV ++I
Sbjct: 270 D---HQPSLRIINRRVITPSDEEISRNPRSRSAKMRVAERI 307
>gi|160880611|ref|YP_001559579.1| S-adenosyl-methyltransferase MraW [Clostridium phytofermentans
ISDg]
gi|263433295|sp|A9KM86.1|RSMH2_CLOPH RecName: Full=Ribosomal RNA small subunit methyltransferase H 2;
AltName: Full=16S rRNA m(4)C1402 methyltransferase 2;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH 2
gi|160429277|gb|ABX42840.1| S-adenosyl-methyltransferase MraW [Clostridium phytofermentans
ISDg]
Length = 317
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 118/343 (34%), Positives = 182/343 (53%), Gaps = 30/343 (8%)
Query: 109 IQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDP 168
+++++ HI V+L E +D + + +VD TLG GH+ +++ +IG+D D
Sbjct: 3 LEEKEFKHISVLLQETIDSLNI-KPDGIYVDGTLGGGGHAYEVLKRLSPKGRYIGIDQDE 61
Query: 169 SALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMS 228
A+A A L+ + N+ ++K VL +++ VD IL+DLG+S
Sbjct: 62 DAIAAAGKRLSEFSD-------QVTIVRSNYCNMKQVL----KDLGIDKVDGILLDLGVS 110
Query: 229 SMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQ 288
S Q++ PERGFS + PLDMRMD + SL A DI+N + + E+ R++R+YGE+ +
Sbjct: 111 SYQLDTPERGFSYRENAPLDMRMDNRNSLTARDIVNEYSEQEIYRIIRDYGEDKFAKNIA 170
Query: 289 NKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLES 348
IV+ R L +T EL + I++ P M+ R A + FQA+RI +N EL+ L +
Sbjct: 171 KHIVRMRSEKPLETTDELTEAIKAAIP-MKIRMNTG-HPAKKTFQAIRIELNHELEVLTN 228
Query: 349 SLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE 408
+L D L GRL +I+FHSLEDRIVK F + E + N
Sbjct: 229 TLEDMIDLLKEDGRLSIITFHSLEDRIVKAAF-------------RKNENPCVCPPNFPV 275
Query: 409 TWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ +G + +TK+PI PS +E N R +SAKLRV +K
Sbjct: 276 CVCNRKPKGIH---ITKKPILPSEQELEYNKRSKSAKLRVFEK 315
>gi|152967151|ref|YP_001362935.1| S-adenosyl-methyltransferase MraW [Kineococcus radiotolerans
SRS30216]
gi|263456185|sp|A6WCY2.1|RSMH_KINRD RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|151361668|gb|ABS04671.1| S-adenosyl-methyltransferase MraW [Kineococcus radiotolerans
SRS30216]
Length = 391
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 108/246 (43%), Positives = 143/246 (58%), Gaps = 20/246 (8%)
Query: 138 VDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAK 197
VD TLG GH+ ++R HP L+L +G+D DP AL A AH + H FA
Sbjct: 52 VDVTLGMGGHAHELLRRHPGLRL-VGMDRDPQALELA-----------AH---RLHEFAD 96
Query: 198 NFRHIKSV---LGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQ 254
+ SV LG+ +++ VDA+ DLG+SS+Q++ ERGFS D LDMRMDP
Sbjct: 97 RITLVHSVSDGLGEALDDLGLDTVDAVFFDLGVSSLQLDEAERGFSYARDTALDMRMDPG 156
Query: 255 ASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVT 314
A A D+LN++ +++ R+LR YGEE + + IV+ R S+ LVDL+++
Sbjct: 157 APTTAADVLNTYSHSQLTRILRVYGEERFAPRIASAIVRERALEPFTSSARLVDLVRANV 216
Query: 315 PGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDR 374
P RR G A R FQALRI VNDEL +E SL F+ LAP GRL V++FHSLEDR
Sbjct: 217 PAA-TRRTGG-NPAKRTFQALRIEVNDELGVVERSLPVAFERLAPEGRLAVLTFHSLEDR 274
Query: 375 IVKQTF 380
IVK
Sbjct: 275 IVKNAL 280
>gi|408356958|ref|YP_006845489.1| methyltransferase MraW [Amphibacillus xylanus NBRC 15112]
gi|407727729|dbj|BAM47727.1| methyltransferase MraW [Amphibacillus xylanus NBRC 15112]
Length = 325
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 125/339 (36%), Positives = 175/339 (51%), Gaps = 33/339 (9%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
HI V+ E +D + + +VD TLGA GHS I+ +L I D D AL A
Sbjct: 3 EHISVLRNETIDGLNI-KPDGIYVDGTLGAGGHSEQIVSKLTTGRL-IAFDQDEEALEAA 60
Query: 175 RAHLNSLLHGQAHPHLKTHTFA-KNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
+ L+ P+ F NFRH+K VL D+ + VD L DLG+SS Q++
Sbjct: 61 KKRLS--------PYQDKIIFVHSNFRHLKQVLD--DKGV--EHVDGFLFDLGVSSPQLD 108
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
+ ERGFS D PLDMRM+ Q L A ++N W ++ + +YGEE + KI
Sbjct: 109 HKERGFSYQHDAPLDMRMNQQQELSAYHVVNEWSYQDLVHIFFKYGEEKFAKQIARKIEL 168
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +T ELVD+I+ P R+ G A RVFQA+RIAVNDEL+ LH
Sbjct: 169 ARKGKPIQTTYELVDIIKDAIPAASRRKGG--HPAKRVFQAIRIAVNDELEAFYDVLHQA 226
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
+ +A GGR+ VI+FHSLEDR+ KQ F ++ + N I +
Sbjct: 227 AEKVAVGGRIAVITFHSLEDRLCKQAF---------------KKWSTLPPLPKNLPIIPE 271
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
Q K++T++PI + E N R RSAKLR+++K+
Sbjct: 272 SSQP-PFKLITRKPIVATETELDSNRRARSAKLRIVEKV 309
>gi|441158185|ref|ZP_20967317.1| 16S rRNA m(4)C1402 methyltransferase [Streptomyces rimosus subsp.
rimosus ATCC 10970]
gi|440617411|gb|ELQ80514.1| 16S rRNA m(4)C1402 methyltransferase [Streptomyces rimosus subsp.
rimosus ATCC 10970]
Length = 319
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 119/342 (34%), Positives = 173/342 (50%), Gaps = 39/342 (11%)
Query: 116 HIPVMLGEVLDVFSSS--RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAK 173
H+PVML LD+ + + VDCTLG GHS A++ P +L I +D DP+AL
Sbjct: 7 HVPVMLQRCLDMLAPALAEPGAVVVDCTLGLGGHSEALLATFPAARL-IALDRDPAALKL 65
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGV---DAILMDLGMSSM 230
A L P+ T + +V ++ E + R GV +L DLG+SSM
Sbjct: 66 AGERLA--------PYGDRATL------VHAVYDELPEVLARLGVPRVQGVLFDLGVSSM 111
Query: 231 QVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNK 290
Q++ +RGF+ D PLDMRMD + A ++LN++P E+ R+LR YGEE +
Sbjct: 112 QLDEADRGFAYAQDAPLDMRMDQTTGISAAEVLNTYPPGELVRILRAYGEEKQAKRIVEA 171
Query: 291 IVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSL 350
+V+ R + ++ LV+LI+ P R G A R FQALRI VN EL +ES++
Sbjct: 172 VVRERAKEPFTNSARLVELIRDALPQAAKRTGG--NPAKRTFQALRIEVNAELAAVESAV 229
Query: 351 HACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETW 410
A LA GGR+ V+++HSLEDRIVKQ + H + E +
Sbjct: 230 PAAVRALAVGGRIAVLAYHSLEDRIVKQVLAAGAAHTAPPGL-----------PVVPEQY 278
Query: 411 IRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++ K+LT+ P+ EE N R A+LR ++I
Sbjct: 279 QPRL------KLLTRGAELPTEEEIAENRRAAPARLRGAERI 314
>gi|375101565|ref|ZP_09747828.1| S-adenosyl-methyltransferase MraW [Saccharomonospora cyanea NA-134]
gi|374662297|gb|EHR62175.1| S-adenosyl-methyltransferase MraW [Saccharomonospora cyanea NA-134]
Length = 328
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 128/343 (37%), Positives = 176/343 (51%), Gaps = 39/343 (11%)
Query: 114 SSHIPVMLGEVLDVFSSSRTI--TSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
++H+PV++ VL++F + VD TLG GH+ A++ A+P L++ IG+D DP+AL
Sbjct: 14 ATHLPVLVERVLELFEPTVADHDAVVVDATLGLGGHTEALLDAYPRLRV-IGLDRDPTAL 72
Query: 172 AKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDE---NILRSGVDAILMDLGMS 228
++R L HG R + +V +I E ++ S VD +LMDLG+S
Sbjct: 73 ERSRQRLAR--HGD------------RVRFVHTVYHRIPEVLSDLGLSEVDGVLMDLGVS 118
Query: 229 SMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQ 288
SMQ++ ERGF+ D PLDMRMDP L A D+LN++P E+ R+LR+YGEE +
Sbjct: 119 SMQLDLDERGFAYARDAPLDMRMDPTTGLTAADVLNTYPVDELTRILRDYGEEKFARRIA 178
Query: 289 NKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLES 348
+V R R ++ LV L+ P RR G A R FQALRI VN EL L
Sbjct: 179 KAVVAERQRHPFDTSERLVRLLYDTVPAP-SRRTGG-HPAKRTFQALRIEVNGELDILRE 236
Query: 349 SLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE 408
++ A LA GGR+ V S+HSLEDRIVKQ EG EL
Sbjct: 237 AVPAAIAALAEGGRIVVESYHSLEDRIVKQALAKAA--TSRTPEGLPVELPG-------- 286
Query: 409 TWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
G ++LT+ EE R N R S +LR +K
Sbjct: 287 -------HGPELRLLTRGAEKADEEEIRRNPRAASVRLRAAEK 322
>gi|449102929|ref|ZP_21739676.1| ribosomal RNA small subunit methyltransferase H [Treponema
denticola AL-2]
gi|449109717|ref|ZP_21746351.1| ribosomal RNA small subunit methyltransferase H [Treponema
denticola ATCC 33520]
gi|448958960|gb|EMB39688.1| ribosomal RNA small subunit methyltransferase H [Treponema
denticola ATCC 33520]
gi|448965731|gb|EMB46392.1| ribosomal RNA small subunit methyltransferase H [Treponema
denticola AL-2]
Length = 315
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 125/345 (36%), Positives = 171/345 (49%), Gaps = 41/345 (11%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
Q H V+L E L+ + FVD TLG GH+ A ++ +P+L IGVD D S
Sbjct: 2 QPVHTSVLLEECLEFLKPDVSDNLFVDGTLGEGGHTEAFLKRYPQLNA-IGVDADVSIQE 60
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDA-----ILMDLGM 227
+A+ L G+ I+ LG DE D+ IL+DLG+
Sbjct: 61 RAKERLKPF--GE---------------RIRFHLGWSDEFFKNYPKDSAPPNLILLDLGI 103
Query: 228 SSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLL 287
S RGFS D PLDMR++P+ L A DI+NS+ + ++ ++ YGEE +
Sbjct: 104 SMFHYVKSGRGFSFSSDEPLDMRLNPELRLSAADIVNSYNEKDLADLIFNYGEERYSRKI 163
Query: 288 QNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLE 347
++IV+ R+ + EL D I P + R G I AT+ FQALRIAVN EL L
Sbjct: 164 ASRIVEQRVASAFSTAKELADCIYKAVP--QNYRHGKIHPATKTFQALRIAVNGELDRLP 221
Query: 348 SSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNIN 407
L A F LAP GRLG+I+FHSLEDRIVK F + + + I
Sbjct: 222 RLLEAAFSVLAPNGRLGLITFHSLEDRIVKFYFKEL-----------GKSCTCPENMPIC 270
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ R ++LTK+ + S EE RLN RSA+LRV++KI
Sbjct: 271 KCGGRP-----RAEVLTKKAVKASDEEIRLNPPSRSARLRVVRKI 310
>gi|326919741|ref|XP_003206136.1| PREDICTED: probable S-adenosyl-L-methionine-dependent
methyltransferase METT5D1-like [Meleagris gallopavo]
Length = 410
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 126/357 (35%), Positives = 188/357 (52%), Gaps = 41/357 (11%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HIPVM+ EV++ S ++ F+D T GA GHS+A++ + ++ +D DP+A A+
Sbjct: 75 HIPVMVEEVINCLSP-QSGQRFLDMTFGAGGHSTALLEKASNITIY-ALDRDPTAYKIAQ 132
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDEN---ILRSGV-----DAILMDLGM 227
+++P + I+++LGQ ++ ++ SGV D +L+D G
Sbjct: 133 QL------SESYP-----------KQIQALLGQFSQSEALLISSGVEPGTLDGVLLDAGC 175
Query: 228 SSMQVNNPERGFSVLGDGPLDMRMD----PQASLKAEDILNSWPDAEVGRVLREYGEESN 283
SSMQ + PERGFS+ DGPLDMRMD P A D++N+ + +LR YGEE +
Sbjct: 176 SSMQFDTPERGFSLQKDGPLDMRMDSDRYPDMP-TAADVVNALDQQALASILRTYGEEKH 234
Query: 284 WHLLQNKIVQARLRGGLHSTGELVDLIQSVTPG--MRGRR---QGWIKTATRVFQALRIA 338
+ + IVQAR + T +L ++ P + R+ Q AT+ FQ LRI
Sbjct: 235 AKKIASAIVQARSIYPITRTQQLASIVAGAFPASALYARKDLLQRPTHVATKTFQGLRIF 294
Query: 339 VNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEEL 398
VNDEL L L L PGGRL +SFHSLEDRI+K+ FL ID + G+ +++
Sbjct: 295 VNDELHELLIGLKTAEKFLKPGGRLVALSFHSLEDRIIKR-FLHGIDMTEKYNLGSRQKI 353
Query: 399 RNIRDDNINETWIRQIIQG-WNGK--ILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
R + E ++ G N K + K+ +TP A++ N R RSAKLR K+
Sbjct: 354 RRALKNCSKEENTQEFPHGKSNSKWTFIQKKVLTPQAKDILTNPRARSAKLRAAVKL 410
>gi|227486691|ref|ZP_03917007.1| S-adenosylmethionine-dependent methyltransferase involved in cell
envelope biogenesis [Anaerococcus lactolyticus ATCC
51172]
gi|227235279|gb|EEI85294.1| S-adenosylmethionine-dependent methyltransferase involved in cell
envelope biogenesis [Anaerococcus lactolyticus ATCC
51172]
Length = 309
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 122/344 (35%), Positives = 174/344 (50%), Gaps = 35/344 (10%)
Query: 109 IQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDP 168
+ + H PV+ E ++ + + + D TLG GHS I+ L IG+D D
Sbjct: 1 MNNMKFEHTPVLYRECIENLNI-KPDGIYADLTLGKGGHSKLILEKLSAKGLLIGIDQDK 59
Query: 169 SALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMS 228
+A+ A +L + F NF +I VL + N +D LMD+G+S
Sbjct: 60 AAIEAASENLKD--------YDNKVFFNTNFENIGKVLTEAGFN----KIDGALMDIGVS 107
Query: 229 SMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQ 288
S Q++NPERGFS + DGPLDMRM+ Q L AE I+N E+ R+ +YGEE +
Sbjct: 108 SYQIDNPERGFSYIHDGPLDMRMNRQNELTAEKIVNECSQDELTRIFFDYGEERFSKAIA 167
Query: 289 NKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLES 348
IV+AR +++T +L +++ M+ R + RVFQALRI VN EL L
Sbjct: 168 KNIVKARANERINTTFKLRNIV------MKSARFTEVHPEKRVFQALRIEVNRELDVLTK 221
Query: 349 SLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE 408
++ D + GRL +I+FHSLEDRIVK F ++ A G I I
Sbjct: 222 AIDTIIDFIDKDGRLAIITFHSLEDRIVKNKF-------KDLATG------CICPPEIPV 268
Query: 409 TWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ + KI+TK+PIT A+E R N R + AKLRV Q+I
Sbjct: 269 CVCNHVAK---VKIITKKPITAKADELRENSRSKPAKLRVCQRI 309
>gi|383823198|ref|ZP_09978403.1| 16S rRNA m(4)C1402 methyltransferase [Mycobacterium xenopi
RIVM700367]
gi|383339523|gb|EID17858.1| 16S rRNA m(4)C1402 methyltransferase [Mycobacterium xenopi
RIVM700367]
Length = 335
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 112/278 (40%), Positives = 148/278 (53%), Gaps = 30/278 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTI-------TSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDP 168
H+PV+L + + + + T VD T+GA GH+ + P L+L IG+D DP
Sbjct: 10 HVPVLLERCVALLTPALTRHHPDGSGAILVDATIGAGGHAERFLTDLPGLRL-IGLDRDP 68
Query: 169 SALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG------VDAIL 222
+AL RA L FA +++ I + +G VD IL
Sbjct: 69 NALDLTRARLTR--------------FADRVSLVRTRYDGIATALTETGCAATGSVDGIL 114
Query: 223 MDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEES 282
DLG+SSMQ++ PERGFS D PLDMRMDP + L A DI+N++ +A + VLR YGEE
Sbjct: 115 FDLGVSSMQLDRPERGFSYAHDAPLDMRMDPDSPLTAADIVNTYDEAALADVLRRYGEER 174
Query: 283 NWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDE 342
+ IV+ R TGELVDL+ P RR G A R FQALRIAVNDE
Sbjct: 175 FARRIAAYIVRRRAVTPFTRTGELVDLLYQAIPAP-ARRTGG-HPAKRTFQALRIAVNDE 232
Query: 343 LKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTF 380
L++L +L D L GR+ V+++ SLEDRIVK F
Sbjct: 233 LESLRRALPTALDALTVEGRIVVLAYQSLEDRIVKDVF 270
>gi|407477657|ref|YP_006791534.1| ribosomal RNA small subunit methyltransferase H [Exiguobacterium
antarcticum B7]
gi|407061736|gb|AFS70926.1| Ribosomal RNA small subunit methyltransferase H [Exiguobacterium
antarcticum B7]
Length = 312
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 120/328 (36%), Positives = 167/328 (50%), Gaps = 54/328 (16%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
+VDCTLG AGHS I++ L+ D D AL A L + +
Sbjct: 24 YVDCTLGGAGHSEEIVKQLTTGHLY-AFDQDDVALEHAAERLAA--------------YE 68
Query: 197 KNFRHIKSVLGQIDENILRSGV---DAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDP 253
F IKS + E + GV D IL DLG+SS Q++ ERGFS D LDMRMD
Sbjct: 69 GRFTLIKSNFVHLQEELEARGVTKVDGILFDLGVSSPQLDEGERGFSYNFDARLDMRMDQ 128
Query: 254 QASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSV 313
+SL A +++N WP ++ R+L YGEE + KI +AR G + +T ELV+LI+
Sbjct: 129 TSSLSAYEVVNEWPYNDLVRILFTYGEEKFSKQIARKIEKAREVGPIETTFELVELIKDA 188
Query: 314 TPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLED 373
P R+ G A R FQA+RIAVNDEL + +++ D LA GGRL VI+FHSLED
Sbjct: 189 IPAPARRKGG--HPAKRTFQAIRIAVNDELNVFDRAVYQAIDLLAVGGRLCVITFHSLED 246
Query: 374 RIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGW---------NGKILT 424
R+ KQ F ++ + ++ QG +++T
Sbjct: 247 RMCKQAFK-------------------------EKSSLPELPQGLPMIPKEFEPELRLVT 281
Query: 425 KRPITPSAEEERLNCRCRSAKLRVIQKI 452
++PIT +E N R RSAKLR+++K+
Sbjct: 282 RKPITAGDDELDDNRRSRSAKLRIVEKM 309
>gi|436838783|ref|YP_007323999.1| S-adenosyl-methyltransferase MraW [Fibrella aestuarina BUZ 2]
gi|384070196|emb|CCH03406.1| S-adenosyl-methyltransferase MraW [Fibrella aestuarina BUZ 2]
Length = 311
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 129/338 (38%), Positives = 178/338 (52%), Gaps = 43/338 (12%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAII-RAHPELKLHIGVDVDPSALAKA 174
H PVML E +D + + +VD T G GHS AI+ P +L + D DP A A A
Sbjct: 6 HQPVMLAECIDGLAL-KPNGIYVDVTFGGGGHSRAILDELGPGARL-LAFDQDPDARANA 63
Query: 175 RAHLNSLLHGQAHPHLKTHTF-AKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
A LN P L TF A NFR++K L VD IL DLG+SS Q++
Sbjct: 64 -AALND-------PRL---TFIAANFRNLKRYLRLYGV----KQVDGILADLGISSHQID 108
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
PERGFS + LDMRM+ Q L A ++N++P+A++ R+L YGE +N N I
Sbjct: 109 TPERGFSTRFEADLDMRMNQQGDLTARQVVNTYPEADLHRILGMYGELTNARTAANAITS 168
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR L++ +L + ++ P RG+ + +VFQALRI VNDELK LE L
Sbjct: 169 ARANQPLNTINDLKEALKRCAP--RGKENKYF---AQVFQALRIEVNDELKVLEEFLEQV 223
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
D LAP GRL V+S+HSLEDR+VK + I+ + E + +
Sbjct: 224 PDLLAPNGRLVVMSYHSLEDRLVK----NFINKGKFSGE-------------VEKDLFGN 266
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
I+ +G +T++PI + +E N R RSAKLR+ +K
Sbjct: 267 EIKPLHG--VTRKPIEATPDEITRNPRARSAKLRIAEK 302
>gi|436840221|ref|YP_007324599.1| S-adenosyl-dependent methyltransferase active on membrane-located
substrates [Desulfovibrio hydrothermalis AM13 = DSM
14728]
gi|432169127|emb|CCO22493.1| S-adenosyl-dependent methyltransferase active on membrane-located
substrates [Desulfovibrio hydrothermalis AM13 = DSM
14728]
Length = 325
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 122/347 (35%), Positives = 184/347 (53%), Gaps = 30/347 (8%)
Query: 106 ESIIQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVD 165
ES + + H V+L EV++ + + + ++D TLG AGHSSAI+ A E G+D
Sbjct: 2 ESNETKPEKVHTSVLLNEVIE-WLAPKPGGLYLDGTLGMAGHSSAILDAAGEGAQLAGLD 60
Query: 166 VDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDL 225
D AL A L +G+ + H F F ++ L ++ + +D +++DL
Sbjct: 61 RDEQALKLAGTRLEP--YGE-----QAHRFHLAFSKFEAALDELGWDT----IDGVVLDL 109
Query: 226 GMSSMQVNNPERGFSVLGDGPLDMRMDPQASLK-AEDILNSWPDAEVGRVLREYGEESNW 284
G+SS+ ++ ERGFS + +GPLDMRMDP + A I+N +++ R+L+ YGEE
Sbjct: 110 GVSSLHLDRGERGFSFIKEGPLDMRMDPAGGMPPASSIINKGSYSDINRILKLYGEEPLA 169
Query: 285 HLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELK 344
+ I++AR + +T EL +++ P R R AT+ FQ LRIAVN EL+
Sbjct: 170 SRITKAIIKAREEKKITTTLELASIVEKAYPAKR-RALSRTHPATKTFQGLRIAVNSELE 228
Query: 345 TLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDD 404
L+ L D L PG R+ +ISFHSLEDRIVK+ F + E +N
Sbjct: 229 ELQKFLQRIPDRLNPGARVAIISFHSLEDRIVKKAF--------------KAESQNCDCP 274
Query: 405 NINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ ++ N IL+K+PI P+ EE +N R RSAKLRV ++
Sbjct: 275 PMQPICTCGKVKRLN--ILSKKPILPTQEEMAVNPRSRSAKLRVAER 319
>gi|168333718|ref|ZP_02691971.1| S-adenosyl-methyltransferase MraW [Epulopiscium sp. 'N.t.
morphotype B']
Length = 311
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 120/340 (35%), Positives = 181/340 (53%), Gaps = 30/340 (8%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
+ +HI V+L E ++ + +T +VD TLG AGH++ I R +G+D D A+A
Sbjct: 2 EFNHISVLLNECIEGLNI-KTNGIYVDGTLGGAGHATEICRHLNSEGTLVGIDQDAIAIA 60
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
A A L A + NF ++ +VL +++ + +D +L+DLG+SS Q+
Sbjct: 61 TAEARL-------AEAANRVLVIKXNFANVDAVLEELEID----KIDGMLLDLGVSSYQL 109
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ ERGFS + D LDMRM+ A A D++NS+ + E+ V++ +GEE + IV
Sbjct: 110 DEAERGFSYMRDAKLDMRMNQDAKFSAFDVVNSYTEDELAVVIKNFGEEKWARRIAKFIV 169
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
+AR + +T ELV++I+ P R +G A R FQA+RI VN E+ + ++
Sbjct: 170 EARASSSIDTTYELVEIIKKAIPKA-ARLEGG-HPAKRTFQAIRIEVNKEIDIIAPAIKE 227
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
L GGRL +I+FHSLEDRIVK TF EL N N I
Sbjct: 228 IVAHLNVGGRLAIITFHSLEDRIVKHTF---------------RELENPCTCPSN-FPIC 271
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ K++TK+PI PS +E N R +SAKLR+++KI
Sbjct: 272 VCNKKSQVKVITKKPILPSEQELENNSRSKSAKLRIVEKI 311
>gi|289551038|ref|YP_003471942.1| S-adenosyl-methyltransferase MraW [Staphylococcus lugdunensis
HKU09-01]
gi|315658534|ref|ZP_07911406.1| S-adenosyl-methyltransferase MraW [Staphylococcus lugdunensis
M23590]
gi|418414334|ref|ZP_12987549.1| ribosomal RNA small subunit methyltransferase H [Staphylococcus
lugdunensis ACS-027-V-Sch2]
gi|418637535|ref|ZP_13199854.1| S-adenosyl-methyltransferase MraW [Staphylococcus lugdunensis
VCU139]
gi|289180570|gb|ADC87815.1| S-adenosyl-methyltransferase MraW [Staphylococcus lugdunensis
HKU09-01]
gi|315496863|gb|EFU85186.1| S-adenosyl-methyltransferase MraW [Staphylococcus lugdunensis
M23590]
gi|374838781|gb|EHS02316.1| S-adenosyl-methyltransferase MraW [Staphylococcus lugdunensis
VCU139]
gi|410876941|gb|EKS24838.1| ribosomal RNA small subunit methyltransferase H [Staphylococcus
lugdunensis ACS-027-V-Sch2]
Length = 311
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 120/335 (35%), Positives = 177/335 (52%), Gaps = 30/335 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ VML E +D + + + +VDCTLG AGH+ ++ + I +D D +A+ A+
Sbjct: 4 HVSVMLNETID-YLNIKPDGVYVDCTLGGAGHALYLLNQLNDEGHLIAIDQDTTAIDNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L + LH H NFR + +L ++ NI VD I DLG+SS Q++ P
Sbjct: 63 EVLKAHLHKVTFVH-------NNFRELTHILKEL--NI--EKVDGIYYDLGVSSPQLDVP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D LDMRMD +L A +++N W + ++ YGEE + +I R
Sbjct: 112 ERGFSYHHDAKLDMRMDRTQTLSAYEVVNEWSYEALVKIFYRYGEEKFSKQIARRIEAHR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +T +LVD+I+ P + RR+G A RVFQA+RIAVNDEL E S+ +
Sbjct: 172 ELQPIETTLQLVDVIKEGIPA-KARRKGG-HPAKRVFQAIRIAVNDELSAFEDSIEQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
+ GR+ VI+FHSLEDR+ KQ F ++ E E R + I E + ++
Sbjct: 230 LVKVNGRISVITFHSLEDRLCKQIF--------QEYEKGPEVPRGL--PIIPEEYTPKL- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
K + ++PIT + E+ N R RSAKLRV +
Sbjct: 279 -----KRVNRKPITATEEDLNQNNRARSAKLRVAE 308
>gi|345877699|ref|ZP_08829439.1| S-adenosyl-methyltransferase mraW [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344225302|gb|EGV51665.1| S-adenosyl-methyltransferase mraW [endosymbiont of Riftia
pachyptila (vent Ph05)]
Length = 311
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 123/346 (35%), Positives = 180/346 (52%), Gaps = 47/346 (13%)
Query: 114 SSHIPVMLGEVLDVFSSSRTITS---FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSA 170
++H PV+L E + + IT+ ++D T G GHS I++ E IG+D DP A
Sbjct: 5 TTHRPVLLEEAVTALN----ITAEGIYIDGTFGRGGHSRRILKVLGERGRLIGIDKDPQA 60
Query: 171 LAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG-VDAILMDLGMSS 229
+ R L G A + +FA ++ Q+ +N +G VD +L+DLG+SS
Sbjct: 61 IVHGREQLG----GDARFTIVQQSFA--------MIAQVAQNAGVAGRVDGVLLDLGVSS 108
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
Q++ ERGFS L DGPLDMRMDP + + A L + D E+ VL+ YG+E + +
Sbjct: 109 PQLDQAERGFSFLQDGPLDMRMDPNSGMSAAQWLAAATDKEIADVLKRYGDERHARRIAR 168
Query: 290 KIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIK---TATRVFQALRIAVNDELKTL 346
IV AR + +TG L +++ + P W K ATR FQA+RI +N EL L
Sbjct: 169 AIVAARQVEPILTTGRLAEIVSAANP-------AWEKGKHPATRSFQAIRIFINRELDDL 221
Query: 347 ESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNI 406
+ L + L PGGRL VISFHSLEDRIVK+ R+ A+G+ R +
Sbjct: 222 QQFLGQVLEVLRPGGRLAVISFHSLEDRIVKRFM-------RDQAKGD----RFPAGVPV 270
Query: 407 NETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ ++ ++ L + I P A+E N R RSA LRV +++
Sbjct: 271 TQAQLQPRLK------LLGKAIRPGADETESNPRARSAVLRVAERL 310
>gi|453380868|dbj|GAC84392.1| ribosomal RNA small subunit methyltransferase H [Gordonia
paraffinivorans NBRC 108238]
Length = 328
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 111/273 (40%), Positives = 151/273 (55%), Gaps = 23/273 (8%)
Query: 116 HIPVMLGEVLDVFS---SSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
HIPVM ++++ + S F+D TLGA GHS I+ A P +++ IG+D D SAL
Sbjct: 16 HIPVMGRRIVELLTPALESDETRVFLDATLGAGGHSELILNAFPNVRV-IGIDRDSSALD 74
Query: 173 KARAHLNSLLHGQAHPH---LKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSS 229
AR L PH L H F I VL + E + +DA L DLG+SS
Sbjct: 75 IARRRLE--------PHSNRLSLHQ--ATFHEIDDVLAEAGE----TSIDAALFDLGVSS 120
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
MQ++ RGF+ D PLDMRM+P L A DILN++ E+ RVL EYGEE + +
Sbjct: 121 MQLDQAGRGFAYSVDAPLDMRMNPDDPLTAADILNTYSHGELARVLSEYGEERFAGKIAS 180
Query: 290 KIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESS 349
+++ R + ++ LV+L+ + P R G A R FQALRI VN EL L +
Sbjct: 181 AVIREREKEPFTTSARLVELLYATIPAATRRTGGH--PAKRTFQALRIEVNHELDVLREA 238
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLS 382
L A D L GGR+ V+S+ SLEDRIVK+ F++
Sbjct: 239 LPAALDALVVGGRVVVMSYQSLEDRIVKREFVA 271
>gi|387760622|ref|YP_006067599.1| S-adenosyl-methyltransferase MraW [Streptococcus salivarius 57.I]
gi|339291389|gb|AEJ52736.1| S-adenosyl-methyltransferase MraW [Streptococcus salivarius 57.I]
Length = 316
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 124/341 (36%), Positives = 180/341 (52%), Gaps = 37/341 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG AGHSS ++ E D D A+ A+
Sbjct: 7 HVTVLLHETVDMLDI-KPDGIYVDATLGGAGHSSYLLSQLSEKGHLYCFDQDQKAIDNAQ 65
Query: 176 AHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
L + G TF K NFR++KS L E + S +D IL DLG+SS Q++
Sbjct: 66 VRLKDYIDKGMV-------TFIKDNFRNLKSNL----EALGVSEIDGILYDLGVSSPQLD 114
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
ERGFS D LDMRM+ +ASL A D++N++P ++ R+ +YGE+ + KI Q
Sbjct: 115 ERERGFSYKQDAKLDMRMNEEASLTAYDVVNTYPYNDLVRIFFKYGEDKFSKQIARKIEQ 174
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +T EL ++I+S P +++G A ++FQA+RI VNDEL + S+
Sbjct: 175 ARQVKPIETTTELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADESIQEA 232
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTF--LSIIDHNREDAEGNEEELRNIRDDNINETWI 411
D LA GR+ VI+FHSLEDR+ KQ F S +D + +I
Sbjct: 233 LDLLAVDGRISVITFHSLEDRLTKQLFKEASTVDVPK------------------GLPFI 274
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ +Q ++ ++ I PS EE N R SAKLRV +KI
Sbjct: 275 PEDLQPKVA-LVNRKLILPSQEELEANNRSHSAKLRVAKKI 314
>gi|336392777|ref|ZP_08574176.1| 16S rRNA m(4)C1402 methyltranserfase [Lactobacillus coryniformis
subsp. torquens KCTC 3535]
Length = 314
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 133/341 (39%), Positives = 170/341 (49%), Gaps = 38/341 (11%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + +VD TLG GHS ++ D D +A+
Sbjct: 4 HQTVLLNETVDSLQV-KPDGVYVDATLGGGGHSELLLSRLSSAGHLYAFDQDQTAIDNGE 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQ--IDENILRSGVDAILMDLGMSSMQV 232
L QA TF K NFR + + L Q +D+ +D IL DLG+SS Q
Sbjct: 63 RRL------QAEVAAGKVTFIKANFRDLAAELAQRGVDQ------IDGILYDLGVSSPQF 110
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ RGFS D PLDMRMD L A I+N WP A++ R+L YGE+ + I
Sbjct: 111 DEAARGFSYKLDAPLDMRMDRTKPLTAHVIVNQWPYADLERILYRYGEDKFAKRVARAIE 170
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
+AR + +T +L ++I+S P R+ G A R FQALRIAVNDEL E+SL A
Sbjct: 171 RARAEAPIDTTLQLAEIIKSAIPAAARRKGGH--PAKRSFQALRIAVNDELGAEETSLEA 228
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNINETW 410
LA GGR+ VISFHSLEDRIVK + RE A E L + D E
Sbjct: 229 AISLLALGGRISVISFHSLEDRIVKTIY-------REHARAAEMPRGLPIVGDGEQPEL- 280
Query: 411 IRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
KI+TK+PI P+A E N R RSAKLRV +K
Sbjct: 281 ----------KIITKKPIEPTAAEVAENRRSRSAKLRVAEK 311
>gi|449977245|ref|ZP_21816468.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans 11VS1]
gi|449174857|gb|EMB77320.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans 11VS1]
Length = 316
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 123/339 (36%), Positives = 176/339 (51%), Gaps = 33/339 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+L E +D+ + +VD TLG AGHS ++ + D D A+ A+
Sbjct: 7 HITVLLHETIDMLDI-KPDGIYVDATLGGAGHSECLLSKLGKEGHLYCFDQDQKAIDNAK 65
Query: 176 AHLNSLLH-GQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
L + GQ +F K NFRH+KS L DE I +D I DLG+SS Q++
Sbjct: 66 IRLQQYVKTGQV-------SFIKDNFRHLKSRLA--DEGIYE--IDGICYDLGVSSPQLD 114
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
ERGFS D PLDMRM+ A L A D++N++ ++ R+ +YGE+ + KI
Sbjct: 115 ERERGFSYKKDAPLDMRMNQDAQLTAFDVVNTYDYRDLVRLFFKYGEDKFSKQIARKIES 174
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +T EL ++I+S P +++G A ++FQA+RI VNDEL E SL
Sbjct: 175 ARKEKLIETTAELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAAEESLTQA 232
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
D LA GR+ VI+FHSLEDR++KQ F + D ++ +
Sbjct: 233 LDLLALNGRIAVITFHSLEDRLMKQLFKEV----------------TTLDVPKGLPFVPE 276
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+Q ++ ++PI P+ E N R SAKLRVIQKI
Sbjct: 277 NLQP-KFSLVNRKPILPNVRELSENNRAHSAKLRVIQKI 314
>gi|319957176|ref|YP_004168439.1| s-adenosyl-methyltransferase mraw [Nitratifractor salsuginis DSM
16511]
gi|319419580|gb|ADV46690.1| S-adenosyl-methyltransferase MraW [Nitratifractor salsuginis DSM
16511]
Length = 319
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 128/338 (37%), Positives = 181/338 (53%), Gaps = 42/338 (12%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
Q+ HIPV+L EV++ FSS +DCTLG AGHSSA++ AHP+LKL IG+D DP AL
Sbjct: 11 QTPHIPVLLPEVMESFSSLDE-GVLIDCTLGYAGHSSALLEAHPKLKL-IGIDRDPEALE 68
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
+ L + L+ +F++ + S++ Q V IL D G+SS+Q+
Sbjct: 69 FSAQRLAPY---RDRVRLEHGSFSER---LPSLIDQ-------EPVVGILADFGVSSLQL 115
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ ERGFS + LDMRM+P+A L+A D++N +P + + REYGE L IV
Sbjct: 116 DKKERGFSFASEN-LDMRMNPEAPLRAYDVVNGYPLERLEYLFREYGEIRPAGALAAAIV 174
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
+AR + S EL +L ++V +RG+ G AT++FQA+RI VNDEL +E L
Sbjct: 175 KARANAPISSAQELAELAKTV---LRGK--GKTHPATQMFQAIRIEVNDELGEIERLLDT 229
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
G + +I+FHSLEDR+VK F R I
Sbjct: 230 LEAKRPAGAIVSLITFHSLEDRLVKNRF------------------RAWSQKCICPPEAI 271
Query: 413 QIIQGWN---GKILTKRPITPSAEEERLNCRCRSAKLR 447
+ G N G++L+++P + S EE R N R RSAKLR
Sbjct: 272 RCTCGGNHALGEMLSRKPRSASKEELRSNPRSRSAKLR 309
>gi|269926721|ref|YP_003323344.1| S-adenosyl-methyltransferase MraW [Thermobaculum terrenum ATCC
BAA-798]
gi|269790381|gb|ACZ42522.1| S-adenosyl-methyltransferase MraW [Thermobaculum terrenum ATCC
BAA-798]
Length = 304
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 131/345 (37%), Positives = 183/345 (53%), Gaps = 50/345 (14%)
Query: 116 HIPVMLGE---VLDVFSSSRTITSFVDCTLGAAGHSSAII-RAHPELKLHIGVDVDPSAL 171
H V+L E +LD+ + + ++D TLGA GH+ ++ R+ P ++ +G+D DP A+
Sbjct: 2 HTSVLLDESIALLDIHPNGK----YIDATLGAGGHAEKMLERSSPSGRV-LGLDADPRAI 56
Query: 172 AKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQ 231
A+ L + G+ ++ HT NFR+I+ + D N D +L DLG+SSMQ
Sbjct: 57 ELAQQRLGRFV-GR---YVLVHT---NFRYIEQAATEHDFN----PCDGVLFDLGISSMQ 105
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
V+ GFS D PLDMR DP + A DI+ + E+ R++ EYGEE + I
Sbjct: 106 VDAWAAGFSFRRDEPLDMRFDPTSGKTAADIIRESSEQELARIIWEYGEEPKSRQIARAI 165
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
+R + +T +LV ++SV G R R I ATR FQALRIAVNDEL L+ L
Sbjct: 166 KSSR--EPIITTVQLVQAVESVYKGKRSR----IHPATRTFQALRIAVNDELDALQEGLA 219
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
L GGRL VISFHSLEDRIVK RE ++G
Sbjct: 220 GALRVLRVGGRLVVISFHSLEDRIVKHFM-------RERSKG-------------CICPP 259
Query: 412 RQIIQGWNG----KILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
Q++ N K+LT++PI PS EE ++N R RSAKLR +K+
Sbjct: 260 EQLVCTCNHRPEIKVLTRKPIVPSEEEVKVNPRSRSAKLRAAEKL 304
>gi|335043631|ref|ZP_08536658.1| putative S-adenosylmethionine-dependent methyltransferase involved
in cell envelope biogenesis [Methylophaga
aminisulfidivorans MP]
gi|333790245|gb|EGL56127.1| putative S-adenosylmethionine-dependent methyltransferase involved
in cell envelope biogenesis [Methylophaga
aminisulfidivorans MP]
Length = 312
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 120/345 (34%), Positives = 177/345 (51%), Gaps = 35/345 (10%)
Query: 109 IQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDP 168
+ + S H+PV+L E + S + ++D T G GHS AI+ + +G+D DP
Sbjct: 1 MTENYSEHLPVLLSETIQGLSV-KADGKYLDATFGRGGHSRAILALLSDNGRLLGLDRDP 59
Query: 169 SALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMS 228
A+ L P NF + + + + + VD ILMD+G+S
Sbjct: 60 QAIK------TGLALAAEDPRFSIEQ--ANFSELSTA---VHSRLWQGSVDGILMDIGVS 108
Query: 229 SMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQ 288
S Q+++ ERGFS + DGPLDMRM+P A + A + L + E+ V++ GEE +
Sbjct: 109 SPQLDDAERGFSFMKDGPLDMRMNPDAGISAAEWLATAEMDEIADVIKTLGEERYGKRIA 168
Query: 289 NKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLES 348
IV+ R + +T +L DL+ +P R + ATR FQA+RI +N+EL+ L +
Sbjct: 169 RAIVETRDENPITTTKQLADLVDKASPS----RDKFKHPATRTFQAIRIFINNELEELTT 224
Query: 349 SLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE-EELRNIRDDNIN 407
+L D LA GGRL VISFHSLEDRIVK+ F R++A G++ I D +N
Sbjct: 225 ALEQALDVLAVGGRLAVISFHSLEDRIVKRFF-------RDEARGDDLPSHFPITVDQLN 277
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
K++ K I S +E RLN R RSA LR+ +K+
Sbjct: 278 PRL----------KVIGK-AIKASEDETRLNPRARSAVLRIAEKL 311
>gi|295111738|emb|CBL28488.1| S-adenosyl-methyltransferase MraW [Synergistetes bacterium SGP1]
Length = 303
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 134/344 (38%), Positives = 177/344 (51%), Gaps = 56/344 (16%)
Query: 115 SHIPVMLGEVLDVFSSS---RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
+H PV+L EVL S + R VD TLG G+S AI+RA P+ ++ GVD DP AL
Sbjct: 3 THEPVLLPEVLSFLSEASEPRRALRIVDGTLGLGGYSEAILRAFPDGRVW-GVDRDPDAL 61
Query: 172 AKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILR--SGVDAILMDLGMSS 229
A+ L++ FA F + + G I +L + DA + DLG+S+
Sbjct: 62 RLAKGRLSA--------------FAPRFCAVHANFGDI-AGVLEGEAPFDAFVFDLGVSN 106
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQA-SLKAEDILNSWPDAEVGRVLREYGEESNWHLLQ 288
+Q+ RGFS DGPLDMRMDP + A ++L+ E+ R+ EYG+E +
Sbjct: 107 LQLTEAARGFSFQQDGPLDMRMDPGGGAPSAAEVLSGLSADELARIFWEYGDERYSRRIA 166
Query: 289 NKIVQARLRG-GLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLE 347
N I+Q R RG L +TGELV LI+ V P R+ G A RVFQALRI VNDEL +E
Sbjct: 167 NGIIQRRARGLRLETTGELVTLIREVLPAPVQRKMG-THPARRVFQALRIFVNDELSAIE 225
Query: 348 SSLHACFDCLAPGGRLGVI-SFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNI 406
S L A LA G + V+ S+HSLEDRIVK F S
Sbjct: 226 SML-ATLPTLAGEGCVAVVVSYHSLEDRIVKHRFRS------------------------ 260
Query: 407 NETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
W ++ +G G+ LT+ P+ P EE N R RSAKLR +
Sbjct: 261 ---WEKE--KGL-GRALTRHPLLPQEEERTRNYRSRSAKLRAFR 298
>gi|414079692|ref|YP_007001116.1| S-adenosyl-methyltransferase MraW [Anabaena sp. 90]
gi|413972971|gb|AFW97059.1| S-adenosyl-methyltransferase MraW [Anabaena sp. 90]
Length = 301
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 130/344 (37%), Positives = 173/344 (50%), Gaps = 59/344 (17%)
Query: 109 IQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDP 168
+++ SHIPV+ EV+ + +++D T+G GHS I+ ++K+ VD D
Sbjct: 11 LEEVTFSHIPVLSQEVITGLNIQPG-GNYLDLTVGGGGHSRLILETAEDVKI-TAVDQDE 68
Query: 169 SALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMS 228
AL A+ +L+ G NF H Q EN D IL DLG+S
Sbjct: 69 DALKAAKENLSEF--GDR----------VNFIHSNFANYQFIEN----SYDGILADLGVS 112
Query: 229 SMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQ 288
S ++NPERGFS LDMRM+ Q SL A DI+N W + E+ + +YGEE +
Sbjct: 113 SYHLDNPERGFSFRNTANLDMRMNQQQSLTAGDIINEWDEKELADIFFKYGEERLSRRIA 172
Query: 289 NKIVQARLRGGLHSTGELVDLI-QSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLE 347
+I++ R +T EL + I SV P R G I ATRVFQALRIAVNDELK LE
Sbjct: 173 RRIIEKR---PFDTTTELANAIAYSVPPKYR---HGRIHPATRVFQALRIAVNDELKVLE 226
Query: 348 SSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNIN 407
+ + + L PGGR+ +ISFHSLEDR VK LR N
Sbjct: 227 TLIEKAPNALIPGGRIAIISFHSLEDRPVKHG------------------LR-------N 261
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+R ILTK+PI + EE + N R RSAKLR+ +K
Sbjct: 262 SPLLR---------ILTKKPIIATEEEIKQNPRSRSAKLRIAEK 296
>gi|416839220|ref|ZP_11902614.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus O11]
gi|416847384|ref|ZP_11907106.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus O46]
gi|323440951|gb|EGA98658.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus O11]
gi|323442268|gb|EGA99898.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus O46]
Length = 304
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 122/331 (36%), Positives = 172/331 (51%), Gaps = 30/331 (9%)
Query: 120 MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLN 179
ML E +D + ++DCTLG AGH+ ++ + I +D D +A+ A+ L
Sbjct: 1 MLNETIDYLNVKEN-GVYIDCTLGGAGHALYLLNQLNDDGRLIAIDQDQTAIDNAKEVLK 59
Query: 180 SLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGF 239
LH H NFR + +L D NI VD I DLG+SS Q++ PERGF
Sbjct: 60 DHLHKVTFVH-------SNFRELTQILK--DLNI--EKVDGIYYDLGVSSPQLDIPERGF 108
Query: 240 SVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGG 299
S D LDMRMD L A +I+N+W + ++ YGEE + +I R +
Sbjct: 109 SYHHDATLDMRMDQTQELTAYEIVNNWSYEALVKIFYRYGEEKFSKQIARRIEAHREQQP 168
Query: 300 LHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAP 359
+ +T ELVD+I+ P + RR+G A RVFQALRIAVNDEL E S+ + +
Sbjct: 169 ITTTLELVDIIKEGIPA-KARRKGG-HPAKRVFQALRIAVNDELSAFEDSIEQAIELVKV 226
Query: 360 GGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWN 419
GGR+ VI+FHSLEDR+ KQ F ++ E E R + I E + ++
Sbjct: 227 GGRISVITFHSLEDRLCKQVF--------QEYEKGPEVPRGL--PVIPEAYTPKL----- 271
Query: 420 GKILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
K + ++PIT + E+ N R RSAKLRV +
Sbjct: 272 -KRVNRKPITATEEDLDDNNRARSAKLRVAE 301
>gi|284045229|ref|YP_003395569.1| S-adenosyl-methyltransferase MraW [Conexibacter woesei DSM 14684]
gi|283949450|gb|ADB52194.1| S-adenosyl-methyltransferase MraW [Conexibacter woesei DSM 14684]
Length = 314
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 131/336 (38%), Positives = 179/336 (53%), Gaps = 39/336 (11%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAII-RAHPELKLHIGVDVDPSALAKA 174
HIPV+ GE++++ VDCTLG GH+ + R P L IG+D DP +A+
Sbjct: 5 HIPVLAGELIELLDPQPG-QVVVDCTLGGGGHARLVAGRIGPTGTL-IGIDRDP--IAEE 60
Query: 175 R-AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGV--DAILMDLGMSSMQ 231
R A L T + R I++ Q E + R GV D + MDLGMSSMQ
Sbjct: 61 RFAEL-------------TAEVSCTTRFIRADFAQGLEQLAREGVQADLVYMDLGMSSMQ 107
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
V+ ERGFS D PLDMRMD + L A +++N W + + R+L+EYGEE + I
Sbjct: 108 VDTWERGFSYAYDAPLDMRMDSEQELTAHEVVNGWDERRLARLLKEYGEERYASKIARAI 167
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
+ R + + +T LVD+I+S P + G A R FQA+RIAVN+EL+ ++ L
Sbjct: 168 ARTREQQPIETTQALVDVIKSAIP--IPAQFGGGHPAKRTFQAIRIAVNEELEQIDDGLP 225
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
+D LAPGGRL ISFHSLEDR VK+ FL +D R I ++ I
Sbjct: 226 FAWDVLAPGGRLAAISFHSLEDRRVKR-FL--VDRARG----------CICPPDLP---I 269
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLR 447
+ G++LT+R I P+A E N R +SA LR
Sbjct: 270 CACGRTPEGELLTRRAIAPTAGEVAHNPRAKSAHLR 305
>gi|383776686|ref|YP_005461252.1| putative S-adenosylmethionine-dependent methyltransferase
[Actinoplanes missouriensis 431]
gi|381369918|dbj|BAL86736.1| putative S-adenosylmethionine-dependent methyltransferase
[Actinoplanes missouriensis 431]
Length = 350
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 116/347 (33%), Positives = 176/347 (50%), Gaps = 33/347 (9%)
Query: 108 IIQQQQSSHIPVMLGEVLDVFSSSRTITS--FVDCTLGAAGHSSAIIRAHPELKLHIGVD 165
++ + + +H+PV+L L++ + + VD TLG GH+ A++ +P++ L +G+D
Sbjct: 4 VMGEPRGTHVPVLLERCLELLAPGLQLPGAVHVDFTLGLGGHAEAVLERYPDVVL-VGLD 62
Query: 166 VDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDL 225
D ALA AR L +TH + + VL ++ + SG L DL
Sbjct: 63 RDTEALAHARHRLARFAG-------RTHLVHAVYDELPRVLAELGIPAIHSG----LFDL 111
Query: 226 GMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWH 285
G+SS+Q++ +RGF+ D PLDMRMD + AE+++N + E+ R+LR+YGEE
Sbjct: 112 GVSSLQLDEADRGFAYAQDAPLDMRMDQSRGVTAEEVVNGYEPGELVRILRQYGEEKFAP 171
Query: 286 LLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKT 345
+ + IV+ R + + ST L +LI+ P RR G A R FQALRI VN EL
Sbjct: 172 RVVSAIVRERAKARITSTARLAELIKEAIPAA-ARRTGG-NPAKRTFQALRIEVNAELDA 229
Query: 346 LESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDN 405
LE ++ A D LAP GRL V+S+ SLED+IVK+ R
Sbjct: 230 LEGAVPAALDALAPKGRLVVMSYQSLEDKIVKRALAE-----------------RARSTG 272
Query: 406 INETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ + G ++LT+ PS E N R S KLR +++I
Sbjct: 273 PIDLPVELPGTGPTLRLLTRGSELPSEAEVTANPRAASVKLRAVERI 319
>gi|325912968|ref|ZP_08175341.1| S-adenosyl-methyltransferase MraW [Lactobacillus iners UPII 60-B]
gi|349611612|ref|ZP_08890845.1| ribosomal RNA small subunit methyltransferase H [Lactobacillus sp.
7_1_47FAA]
gi|325477648|gb|EGC80787.1| S-adenosyl-methyltransferase MraW [Lactobacillus iners UPII 60-B]
gi|348608459|gb|EGY58441.1| ribosomal RNA small subunit methyltransferase H [Lactobacillus sp.
7_1_47FAA]
Length = 317
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 123/340 (36%), Positives = 174/340 (51%), Gaps = 32/340 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + + +VD T G GH+S +++ L IG D D A+ A+
Sbjct: 7 HYSVLLHETIDNLNL-KNDGVYVDATFGGGGHASYLLKQLSNGHL-IGFDQDEYAIELAK 64
Query: 176 AHLNSLLHGQAHPHLK-THTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+ +L + P L H N + + LG ID G+D I DLG+SS Q +
Sbjct: 65 KSFSEVLKANSKPKLSLVHDNFGNLQQNLAKLGFID------GIDGIYYDLGVSSPQFDQ 118
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
PERGFS + LDMRMD L A I+N+W E+ +L +YG+E + IV
Sbjct: 119 PERGFSYRFNARLDMRMDQTKDLDAYKIVNTWSQKELSNILFKYGDEKYARQIAKNIVAK 178
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +T ELVD+I+ P RR G A + FQA+RIAVNDEL+ LE SL
Sbjct: 179 RAIKPITTTFELVDIIKEAIPAF-ARRTGG-HPAKKSFQAIRIAVNDELEVLEKSLLEAI 236
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTF--LSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
+ L PGGR+ VI+F SLED+IVK+ F S +D R + D++ T
Sbjct: 237 EILKPGGRICVITFQSLEDKIVKKIFKKYSDVDIPRGMPQ---------IPDSLKPTL-- 285
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
KI++++PI + +E N R SAKLRV +K+
Sbjct: 286 --------KIISRKPIVATNKELEENNRSHSAKLRVAEKL 317
>gi|50914761|ref|YP_060733.1| S-adenosyl-methyltransferase MraW [Streptococcus pyogenes
MGAS10394]
gi|50903835|gb|AAT87550.1| S-adenosyl-methyltransferase [Streptococcus pyogenes MGAS10394]
Length = 337
Score = 177 bits (450), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 119/348 (34%), Positives = 188/348 (54%), Gaps = 37/348 (10%)
Query: 109 IQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDP 168
+ ++ H+ V+L E +D+ + +VD TLG +GHS+ ++ E D D
Sbjct: 21 VMTKEFHHVTVLLHETVDMLDI-KPDGIYVDATLGGSGHSAYLLSKLGEEGHLYCFDQDQ 79
Query: 169 SALAKARAHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQ--IDENILRSGVDAILMD 224
A+ A+ L S + GQ TF K NFRH+K+ L +DE +D IL D
Sbjct: 80 KAIDNAQVTLKSYIDKGQV-------TFIKDNFRHLKARLTALGVDE------IDGILYD 126
Query: 225 LGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNW 284
LG+SS Q++ ERGFS D PLDMRMD Q+ L A +++N++P ++ ++ +YGE+
Sbjct: 127 LGVSSPQLDERERGFSYKQDAPLDMRMDRQSLLTAYEVVNTYPFNDLVKIFFKYGEDKFS 186
Query: 285 HLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELK 344
+ KI QAR + +T EL +LI++ P +++G A ++FQA+RI VNDEL
Sbjct: 187 KQIARKIEQARAIKPIETTTELAELIKAAKPAKELKKKGH--PAKQIFQAIRIEVNDELG 244
Query: 345 TLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDD 404
+ S+ + LA GR+ VI+FHSLEDR+ KQ F +E + + + + +
Sbjct: 245 AADESIQEAMELLALDGRISVITFHSLEDRLTKQLF-------KEASTVDVPKGLPLIPE 297
Query: 405 NINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++ + ++++++PI PS E N R SAKLRV +KI
Sbjct: 298 DMKPKF----------ELVSRKPILPSHSELAANKRAHSAKLRVAKKI 335
>gi|254797245|ref|YP_003082087.1| S-adenosyl-methyltransferase MraW [Neorickettsia risticii str.
Illinois]
gi|254590494|gb|ACT69856.1| S-adenosyl-methyltransferase MraW [Neorickettsia risticii str.
Illinois]
Length = 296
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 118/337 (35%), Positives = 173/337 (51%), Gaps = 53/337 (15%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H PV+L E L F + + +VD T GA G++ AI+ + VD A+ +
Sbjct: 13 HKPVLLSEALK-FLAPKNGAVYVDATFGAGGYTRAILSS---------VDCFVYAIDRDE 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
++ +T NF I+++LG++ VD I+ DLG+S+MQ+
Sbjct: 63 TVKRFFQLIESDFPKRTTFINANFVDIEALLGEVK-------VDGIVFDLGVSTMQLKVA 115
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
+RGFS L +GPLDMRMD L AE I+NS+ + ++ ++ ++GEE + + IV AR
Sbjct: 116 DRGFSFLHEGPLDMRMDRNTILTAETIVNSYTEVKIASIIYQFGEERMSRKIAHAIVDAR 175
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +T L ++++S P +R I AT+ FQALRI VNDEL LE L
Sbjct: 176 RKKRITTTSSLAEIVRSCFP----KRYYKIDPATKTFQALRIFVNDELGALECGLRTALT 231
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L GGR V+SFHSLEDRIVK F S+ GN
Sbjct: 232 MLKVGGRAVVVSFHSLEDRIVKHLFRSV--------HGN--------------------- 262
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
G+N +LTK+ + PS +E R N RSA++RVI+K+
Sbjct: 263 -GFN--LLTKKIVVPSRDEVRENPSSRSARMRVIEKV 296
>gi|239623438|ref|ZP_04666469.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239521469|gb|EEQ61335.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 315
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 120/345 (34%), Positives = 182/345 (52%), Gaps = 35/345 (10%)
Query: 109 IQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDP 168
+++Q H V+L E + + + +VD TLG GH+ + + +L IG+D D
Sbjct: 1 MEEQAFVHKSVLLYETVGSLNI-KPGGIYVDGTLGGGGHAYEVCKRLGSGRL-IGIDQDA 58
Query: 169 SALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMS 228
A+ A L H K N+ +I++VL ++ +L+ VD I +DLG+S
Sbjct: 59 DAIEAAGRRLE-------HFKDKVTIVRSNYENIRTVLNEL--GLLK--VDGIYLDLGVS 107
Query: 229 SMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQ 288
S Q++ RGF+ D PLDMRMD + + A DI+N++ + E+ R++R+YGE++ +
Sbjct: 108 SYQLDTASRGFTYREDAPLDMRMDQRNTTTAADIVNTYTEMELYRIIRDYGEDNFAKNIA 167
Query: 289 NKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLES 348
IV+AR + +TGEL ++I++ P R R G A R FQA+RI N EL LE
Sbjct: 168 KHIVRARGEHPIETTGELAEIIKAAIPA-RVRATGG-HPAKRTFQAIRIECNHELDVLEQ 225
Query: 349 SLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE 408
S+ + L PGGRL +I+FHSLEDRIVK F R + I
Sbjct: 226 SIDTMIELLNPGGRLSIITFHSLEDRIVKNRF------------------RTNENPCICP 267
Query: 409 TWIRQIIQGW--NGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ G GK+++++PI PS EE N R +SAKLRV ++
Sbjct: 268 HEFPVCVCGRKSKGKVVSRKPILPSKEELEENSRSKSAKLRVFER 312
>gi|166031196|ref|ZP_02234025.1| hypothetical protein DORFOR_00882 [Dorea formicigenerans ATCC
27755]
gi|166029043|gb|EDR47800.1| S-adenosyl-methyltransferase MraW [Dorea formicigenerans ATCC
27755]
Length = 311
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 123/335 (36%), Positives = 175/335 (52%), Gaps = 30/335 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + + +VD TLG GH+ + R E +G+D D +A+ A
Sbjct: 5 HKSVLLNETIDGLNI-KPDGIYVDGTLGGGGHAYEVCRRLGEKGSIVGIDQDAAAIEAAS 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
A L G+ K N+ +KS L ++ + VD I++DLG+SS Q++
Sbjct: 64 ARLKDF--GE-----KVTIVRSNYCDMKSKLHELGID----KVDGIVLDLGVSSYQLDTA 112
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD + + A DI+N + +A++ RV+R+YGE+ + IVQAR
Sbjct: 113 ERGFSYREDAPLDMRMDTRQKMTARDIVNDYTEADLYRVIRDYGEDKFAKNIAKHIVQAR 172
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +T EL ++I++ P ++ G A R FQA+RI +N EL L SL D
Sbjct: 173 AVKPVETTAELSEIIRASIPMKFQKKSGH--PAKRTFQAIRIELNRELDVLRDSLDDMID 230
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L PGGRL +I+FHSLEDRIVK F NE D +
Sbjct: 231 LLNPGGRLCIITFHSLEDRIVKSAF-----------RKNENPCTCPPDFPVCVCG----- 274
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
+ G I+TK+PI PS EE N R +SAKLR+ +
Sbjct: 275 KKSKGSIITKKPILPSEEELEYNSRSKSAKLRIFE 309
>gi|449905165|ref|ZP_21792995.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans M230]
gi|449258516|gb|EMC56092.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans M230]
Length = 316
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 123/339 (36%), Positives = 175/339 (51%), Gaps = 33/339 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+L E +D+ + +VD TLG AGHS ++ + D D A+ +
Sbjct: 7 HITVLLHETIDMLDI-KPDGIYVDATLGGAGHSECLLSKLGKEGHLYCFDQDQKAIDNTK 65
Query: 176 AHLNSLLH-GQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
L + GQ +F K NFRH+KS L DE I +D I DLG+SS Q++
Sbjct: 66 IRLQQYVKTGQV-------SFIKDNFRHLKSRLA--DEGIYE--IDGICYDLGVSSPQLD 114
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
ERGFS D PLDMRM+ A L A D++N++ ++ R+ +YGE+ + KI
Sbjct: 115 ERERGFSYKKDAPLDMRMNQDAQLTAFDVVNTYDYRDLVRLFFKYGEDKFSKQIARKIES 174
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +T EL ++I+S P +++G A ++FQA+RI VNDEL E SL
Sbjct: 175 ARKEKLIETTAELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAAEESLTQA 232
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
D LA GR+ VI+FHSLEDR+ KQ F + D ++ +
Sbjct: 233 LDLLALNGRIAVITFHSLEDRLTKQLFKEV----------------TTLDVPKGLPFVPE 276
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+Q ++ ++PI P+A E N R SAKLRVIQKI
Sbjct: 277 NLQP-KFSLVNRKPILPNARELSENNRAHSAKLRVIQKI 314
>gi|258438778|ref|ZP_05689931.1| S-adenosyl-methyltransferase mraW [Staphylococcus aureus A9299]
gi|257848037|gb|EEV72030.1| S-adenosyl-methyltransferase mraW [Staphylococcus aureus A9299]
Length = 311
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 123/335 (36%), Positives = 173/335 (51%), Gaps = 30/335 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI VML E +D + ++DCTLG AGH+ ++ + I +D D +A+ A+
Sbjct: 4 HISVMLNETIDYLNVKEN-GVYIDCTLGGAGHALYLLNQLNDDGRLIAIDQDQTAIDNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L LH H NFR + +L D NI VD I DLG+SS Q++ P
Sbjct: 63 EVLKDHLHKVTFVH-------SNFRELTQILK--DLNI--EKVDGIYYDLGVSSPQLDIP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D LDMRMD L A +I+N+W + ++ YGEE + +I
Sbjct: 112 ERGFSYHHDATLDMRMDQTQELTAYEIVNNWSYEALVKIFYRYGEEKFSKQIARRIEAHC 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +T ELVD+I+ P + RR+G A RVFQALRIAVNDEL E S+ +
Sbjct: 172 EQQPITTTLELVDIIKEGIPA-KARRKGG-HPAKRVFQALRIAVNDELSAFEDSIEQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
+ GR+ VI+FHSLEDR+ KQ F ++ E E R + I E + ++
Sbjct: 230 LVKVDGRISVITFHSLEDRLCKQVF--------QEYEKGPEVPRGL--PVIPEAYTPKL- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
K + ++PIT + E+ N R RSAKLRV +
Sbjct: 279 -----KRVNRKPITATEEDLDDNNRARSAKLRVAE 308
>gi|449910542|ref|ZP_21794790.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans OMZ175]
gi|449259445|gb|EMC56973.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans OMZ175]
Length = 316
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 123/339 (36%), Positives = 175/339 (51%), Gaps = 33/339 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+L E +D+ + +VD TLG AGHS ++ + D D A+ A+
Sbjct: 7 HITVLLHETIDMLDI-KPDGIYVDATLGGAGHSECLLSKLGKEGHLYCFDQDQKAIDNAK 65
Query: 176 AHLNSLLH-GQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
L + GQ +F K NFRH+KS L DE I +D I DLG+SS Q++
Sbjct: 66 IRLQQYVKTGQV-------SFIKGNFRHLKSRLA--DEGIYE--IDGICYDLGVSSPQLD 114
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
ERGFS D PLDMRM+ A L A D++N++ ++ R+ +YGE+ + KI
Sbjct: 115 ERERGFSYKKDAPLDMRMNQDAQLTAFDVVNTYDYRDLVRLFFKYGEDKFSKQIARKIES 174
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +T EL ++I+S P +++G A ++FQA+RI VNDEL E SL
Sbjct: 175 ARKEKLIETTAELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAAEESLTQA 232
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
D LA GR+ VI+FHSLEDR+ KQ F + D ++ +
Sbjct: 233 LDLLALNGRIAVITFHSLEDRLTKQLFKEV----------------TTLDVPKGLPFVPE 276
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+Q ++ ++PI P+ E N R SAKLRVIQKI
Sbjct: 277 NLQP-KFSLVNRKPILPNVRELSENNRAHSAKLRVIQKI 314
>gi|329921076|ref|ZP_08277599.1| S-adenosyl-methyltransferase MraW [Lactobacillus iners SPIN 1401G]
gi|328934983|gb|EGG31472.1| S-adenosyl-methyltransferase MraW [Lactobacillus iners SPIN 1401G]
Length = 315
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 123/340 (36%), Positives = 174/340 (51%), Gaps = 32/340 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + + +VD T G GH+S +++ L IG D D A+ A+
Sbjct: 5 HYSVLLHETIDNLNL-KNDGVYVDATFGGGGHASYLLKQLSNGHL-IGFDQDEYAIELAK 62
Query: 176 AHLNSLLHGQAHPHLK-THTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+ +L + P L H N + + LG ID G+D I DLG+SS Q +
Sbjct: 63 KSFSEVLKANSKPKLSLVHDNFGNLQQNLAKLGFID------GIDGIYYDLGVSSPQFDQ 116
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
PERGFS + LDMRMD L A I+N+W E+ +L +YG+E + IV
Sbjct: 117 PERGFSYRFNARLDMRMDQTKDLDAYKIVNTWSQKELSNILFKYGDEKYARQIAKNIVAK 176
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +T ELVD+I+ P RR G A + FQA+RIAVNDEL+ LE SL
Sbjct: 177 RAIKPITTTFELVDIIKEAIPAF-ARRTGG-HPAKKSFQAIRIAVNDELEVLEKSLLEAI 234
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTF--LSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
+ L PGGR+ VI+F SLED+IVK+ F S +D R + D++ T
Sbjct: 235 EILKPGGRICVITFQSLEDKIVKKIFKKYSDVDIPRGMPQ---------IPDSLKPTL-- 283
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
KI++++PI + +E N R SAKLRV +K+
Sbjct: 284 --------KIISRKPIVATDKELEENNRSHSAKLRVAEKL 315
>gi|385262411|ref|ZP_10040517.1| S-adenosyl-methyltransferase MraW [Streptococcus sp. SK643]
gi|385190718|gb|EIF38158.1| S-adenosyl-methyltransferase MraW [Streptococcus sp. SK643]
Length = 316
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 124/344 (36%), Positives = 184/344 (53%), Gaps = 43/344 (12%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 7 HVTVLLHETIDMLDV-KPDGIYVDATLGGAGHSEYLLSKLSEKGHLYAFDQDQNAIDNAQ 65
Query: 176 AHLNSLLHGQAHPHLKTH--TFAK-NFRHIKSVLGQ--IDENILRSGVDAILMDLGMSSM 230
L P+++ TF K NFRH+++ L + + E +D I DLG+SS
Sbjct: 66 KRLA--------PYIEKGMVTFIKDNFRHLQARLREAGVQE------IDGICYDLGVSSP 111
Query: 231 QVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNK 290
Q++ ERGFS D PLDMRM+ ASL A +++N + ++ R+ +YGE+ + K
Sbjct: 112 QLDQRERGFSYKKDAPLDMRMNQDASLTAYEVVNHYDYHDLVRIFFKYGEDKFSKQIARK 171
Query: 291 IVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSL 350
I QAR + +T EL ++I+S P +++G A ++FQA+RI VNDEL + S+
Sbjct: 172 IEQAREVKPIETTTELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADESI 229
Query: 351 HACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNINE 408
D LA GGR+ VI+FHSLEDR+ KQ F ++A E + L I DD
Sbjct: 230 QQAMDLLAIGGRISVITFHSLEDRLTKQLF--------KEASTVEVPKGLPFIPDD---- 277
Query: 409 TWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++++++PI PSAEE N R SAKLRV +KI
Sbjct: 278 -------LKPKMELVSRKPIMPSAEELEANNRSHSAKLRVARKI 314
>gi|299143950|ref|ZP_07037030.1| S-adenosyl-methyltransferase MraW [Peptoniphilus sp. oral taxon 386
str. F0131]
gi|298518435|gb|EFI42174.1| S-adenosyl-methyltransferase MraW [Peptoniphilus sp. oral taxon 386
str. F0131]
Length = 312
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 116/316 (36%), Positives = 173/316 (54%), Gaps = 28/316 (8%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
+VD T+G AGHSS I++ L IG+D D +AL K++ L L + F
Sbjct: 25 YVDGTIGGAGHSSQILKILNGTGLLIGIDQDLAALEKSKEVLGELGYNN------YKLFN 78
Query: 197 KNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQAS 256
N++ +L ++ + VD L+DLG+SS Q + +RGFS D LDMRMD A+
Sbjct: 79 SNYKDFNVILDSLEID----KVDGFLLDLGVSSYQFDEGDRGFSYNYDAKLDMRMDTNAA 134
Query: 257 LKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPG 316
A DI+N + E+ ++L +Y EE + + IV++R++ + +T ELV++I++ P
Sbjct: 135 FSAWDIVNGYSKEEIAKILWDYSEEKWAGRIADFIVKSRIKKPIDTTFELVEIIKNAIPA 194
Query: 317 MRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIV 376
+++G A + FQALRI N+EL L ++L D L PGGR+ VISFHSLEDRIV
Sbjct: 195 AARKKKG--HPAKKTFQALRIETNNELDVLRNTLGRMIDRLNPGGRIAVISFHSLEDRIV 252
Query: 377 KQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEER 436
K+TF + D E + N R+I +I+T++PI S +E
Sbjct: 253 KETF----KYYYLDCICPE------KAPVCNCGKKREI------EIITRKPIVASEKELI 296
Query: 437 LNCRCRSAKLRVIQKI 452
N R SAKLRV +K+
Sbjct: 297 ENNRAHSAKLRVAEKL 312
>gi|358463761|ref|ZP_09173742.1| S-adenosyl-methyltransferase MraW [Streptococcus sp. oral taxon 058
str. F0407]
gi|357067817|gb|EHI77901.1| S-adenosyl-methyltransferase MraW [Streptococcus sp. oral taxon 058
str. F0407]
Length = 316
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/342 (35%), Positives = 186/342 (54%), Gaps = 39/342 (11%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 7 HVTVLLHETIDMLDV-KPDGIYVDATLGGAGHSEYLLSKLSEKGHLYAFDQDQNAIDNAQ 65
Query: 176 AHLNSLLHGQAHPHLKTH--TFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
L P+++ TF K NFRH+++ ++ E+ +R +D I DLG+SS Q+
Sbjct: 66 KRLA--------PYIEKGMVTFIKDNFRHLQT---RLQESGVRE-IDGICYDLGVSSPQL 113
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ ERGFS D PLDMRM+ +ASL A +++N + ++ R+ +YGE+ + KI
Sbjct: 114 DQRERGFSYKKDAPLDMRMNQEASLTAYEVVNHYDYHDLVRIFFKYGEDKFSKQIARKIE 173
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
QAR + +T EL ++I+S P +++G A ++FQA+RI VNDEL + S+
Sbjct: 174 QAREVKPIETTTELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADESIQQ 231
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNINETW 410
D LA GR+ VI+FHSLEDR+ KQ F ++A E + L I DD
Sbjct: 232 AMDMLALDGRISVITFHSLEDRLTKQLF--------KEASTVEVPKGLPFIPDD------ 277
Query: 411 IRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++++++PI PSAEE N R SAKLRV +KI
Sbjct: 278 -----LKPKMELVSRKPILPSAEELEANNRSHSAKLRVARKI 314
>gi|373469600|ref|ZP_09560782.1| S-adenosyl-methyltransferase MraW [Lachnospiraceae bacterium oral
taxon 082 str. F0431]
gi|371764294|gb|EHO52715.1| S-adenosyl-methyltransferase MraW [Lachnospiraceae bacterium oral
taxon 082 str. F0431]
Length = 315
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/339 (35%), Positives = 183/339 (53%), Gaps = 35/339 (10%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
SH V+L EV++ + + +VD TLG GH+ +++ KL IG+D D A+ A
Sbjct: 8 SHKSVLLDEVIESLNI-KPDGYYVDGTLGGGGHALEVVKRLEGGKL-IGIDQDADAIKAA 65
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L + + N+ +I+++L + E I + VD I +DLG+SS Q++
Sbjct: 66 TQRLIDYRN-------RVIIVRDNYVNIENILKR--EGIEK--VDGIYVDLGVSSYQLDA 114
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGF+ D PLDMRMD + LKA DI+N + ++E+ V+R+YGE+ + IV
Sbjct: 115 AERGFTYRFDAPLDMRMDDRNELKASDIVNDYSESELFHVIRDYGEDRFAKNIAKHIVAY 174
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + + +T ELVD+I+S P M+ + G A R FQA+RI +N EL+ L+ SL+
Sbjct: 175 RSKKRIETTFELVDIIKSAIP-MKIQVTGG-HPAKRTFQAIRIELNKELEVLKDSLNVMI 232
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
+ L PGGRL VI+FHSLEDRIVKQ F + I
Sbjct: 233 ELLNPGGRLSVITFHSLEDRIVKQAF------------------KKAESPCICPKNFPVC 274
Query: 415 IQG--WNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ G G+++T++ + PS +E N R +SAKLRV +K
Sbjct: 275 VCGNKSKGRVITRKAVLPSEKELEENSRAKSAKLRVFEK 313
>gi|322391027|ref|ZP_08064531.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Streptococcus parasanguinis ATCC 903]
gi|321142257|gb|EFX37731.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Streptococcus parasanguinis ATCC 903]
Length = 316
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/343 (35%), Positives = 179/343 (52%), Gaps = 33/343 (9%)
Query: 112 QQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
++ H+ V+L E +D+ + +VD TLG AGHS ++ E D D A+
Sbjct: 3 KEFHHVTVLLHETIDMLDV-KPDGIYVDATLGGAGHSEYLLTKLNESGHLYAFDQDQHAI 61
Query: 172 AKARAHLNSLLH-GQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSS 229
A+ L + G TF K NFRH+K L ++ + +D I DLG+SS
Sbjct: 62 ENAKIRLAPFIEKGMV-------TFIKDNFRHLKERLNELG----VTEIDGICYDLGVSS 110
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
Q++ ERGFS D PLDMRM+ +ASL A +++NS+ ++ R+ +YGE+ +
Sbjct: 111 PQLDERERGFSYKKDAPLDMRMNQEASLTAYEVVNSYDYHDLVRIFFKYGEDKFSKQIAR 170
Query: 290 KIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESS 349
KI QAR + +T EL ++I+S P +++G A ++FQA+RI VNDEL + S
Sbjct: 171 KIEQARAIKPIETTTELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADES 228
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINET 409
+ D LA GR+ VI+FHSLEDR+ KQ F E +G L I DD
Sbjct: 229 IQQAMDLLALDGRISVITFHSLEDRLTKQLFKEA--STVEVPKG----LPFIPDD----- 277
Query: 410 WIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+++ ++PI PS EE N R SAKLRV +KI
Sbjct: 278 ------LKPKMELVNRKPILPSEEELEENNRSHSAKLRVARKI 314
>gi|322375922|ref|ZP_08050433.1| S-adenosyl-methyltransferase MraW [Streptococcus sp. C300]
gi|321279190|gb|EFX56232.1| S-adenosyl-methyltransferase MraW [Streptococcus sp. C300]
Length = 316
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/344 (35%), Positives = 185/344 (53%), Gaps = 43/344 (12%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + ++VD TLG AGHS ++ E D D +A+ A+
Sbjct: 7 HVTVLLHETIDMLDV-KPDGTYVDATLGGAGHSEYLLSKLSEKGHLYAFDQDQNAIDNAQ 65
Query: 176 AHLNSLLHGQAHPHLKTH--TFAK-NFRHIKSVLGQ--IDENILRSGVDAILMDLGMSSM 230
L P+++ TF K NFRH+++ L + + E +D I DLG+SS
Sbjct: 66 KRLA--------PYIEKGMVTFIKDNFRHLQARLQEAGVQE------IDGICYDLGVSSP 111
Query: 231 QVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNK 290
Q++ ERGFS D PLDMRM+ +ASL A +++N + ++ R+ +YGE+ + K
Sbjct: 112 QLDQRERGFSYKKDAPLDMRMNQEASLTAYEVVNHYDYHDLVRIFFKYGEDKFSKQIARK 171
Query: 291 IVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSL 350
I QAR + +T EL ++I+S P +++G A ++FQA+RI VNDEL + S+
Sbjct: 172 IEQAREVKPIETTTELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADESI 229
Query: 351 HACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNINE 408
D LA GR+ VI+FHSLEDR+ KQ F ++A E + L I DD
Sbjct: 230 QQAMDMLALDGRISVITFHSLEDRLTKQLF--------KEASTVEVPKGLPFIPDD---- 277
Query: 409 TWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++++++PI PSAEE N R SAKLRV +KI
Sbjct: 278 -------LKPKMELVSRKPILPSAEELEANNRSHSAKLRVARKI 314
>gi|290581041|ref|YP_003485433.1| hypothetical protein SmuNN2025_1515 [Streptococcus mutans NN2025]
gi|387786715|ref|YP_006251811.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans LJ23]
gi|449881015|ref|ZP_21784230.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans SA38]
gi|449919797|ref|ZP_21798163.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans 1SM1]
gi|449925102|ref|ZP_21800075.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans 4SM1]
gi|449958728|ref|ZP_21809863.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans 4VF1]
gi|449963976|ref|ZP_21811091.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans 15VF2]
gi|449971195|ref|ZP_21814264.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans 2VS1]
gi|450029565|ref|ZP_21832748.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans G123]
gi|450051401|ref|ZP_21840820.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans NFSM1]
gi|450057025|ref|ZP_21842325.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans NLML4]
gi|450061537|ref|ZP_21843879.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans NLML5]
gi|450066310|ref|ZP_21845909.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans NLML9]
gi|450094066|ref|ZP_21856866.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans W6]
gi|450106235|ref|ZP_21860395.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans SF14]
gi|450123174|ref|ZP_21867072.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans ST6]
gi|450131163|ref|ZP_21869319.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans NLML8]
gi|450139315|ref|ZP_21872478.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans NLML1]
gi|450144397|ref|ZP_21874012.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans 1ID3]
gi|450148990|ref|ZP_21875907.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans 14D]
gi|450159769|ref|ZP_21879638.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans 66-2A]
gi|450165981|ref|ZP_21882110.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans B]
gi|254997940|dbj|BAH88541.1| conserved hypothetical protein [Streptococcus mutans NN2025]
gi|379133116|dbj|BAL69868.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans LJ23]
gi|449150776|gb|EMB54531.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans 1ID3]
gi|449154086|gb|EMB57703.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans NLML8]
gi|449159210|gb|EMB62577.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans 1SM1]
gi|449162030|gb|EMB65194.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans 4SM1]
gi|449169748|gb|EMB72506.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans 4VF1]
gi|449172363|gb|EMB74992.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans 2VS1]
gi|449172953|gb|EMB75556.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans 15VF2]
gi|449194305|gb|EMB95665.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans G123]
gi|449201901|gb|EMC02867.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans NFSM1]
gi|449205871|gb|EMC06599.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans NLML4]
gi|449207187|gb|EMC07867.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans NLML5]
gi|449208996|gb|EMC09544.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans NLML9]
gi|449216663|gb|EMC16762.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans W6]
gi|449223544|gb|EMC23227.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans SF14]
gi|449227113|gb|EMC26558.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans ST6]
gi|449233079|gb|EMC32164.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans NLML1]
gi|449235041|gb|EMC34017.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans 14D]
gi|449240089|gb|EMC38781.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans B]
gi|449240851|gb|EMC39506.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans 66-2A]
gi|449252088|gb|EMC50078.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans SA38]
Length = 316
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/339 (36%), Positives = 175/339 (51%), Gaps = 33/339 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+L E +D+ + +VD TLG AGHS ++ + D D A+ A+
Sbjct: 7 HITVLLHETIDMLDI-KPDGIYVDATLGGAGHSECLLSKLGKEGHLYCFDQDQKAIDNAK 65
Query: 176 AHLNSLLH-GQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
L + GQ +F K NFRH+KS L DE I +D I DLG+SS Q++
Sbjct: 66 IRLQQYVKTGQV-------SFIKDNFRHLKSRLA--DEGIYE--IDGICYDLGVSSPQLD 114
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
ERGFS D PLDMRM+ A L A D++N++ ++ R+ +YGE+ + KI
Sbjct: 115 ERERGFSYKKDAPLDMRMNQDAQLTAFDVVNTYDYRDLVRLFFKYGEDKFSKQIARKIES 174
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +T EL ++I+S P +++G A ++FQA+RI VNDEL E SL
Sbjct: 175 ARKEKLIETTAELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAAEESLTQA 232
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
D LA GR+ VI+FHSLEDR+ KQ F + D ++ +
Sbjct: 233 LDLLALNGRIAVITFHSLEDRLTKQLFKEV----------------TTLDVPKGLPFVPE 276
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+Q ++ ++PI P+ E N R SAKLRVIQKI
Sbjct: 277 NLQP-KFSLVNRKPILPNVRELSENNRAHSAKLRVIQKI 314
>gi|312871981|ref|ZP_07732063.1| S-adenosyl-methyltransferase MraW [Lactobacillus iners LEAF
2062A-h1]
gi|311092558|gb|EFQ50920.1| S-adenosyl-methyltransferase MraW [Lactobacillus iners LEAF
2062A-h1]
Length = 315
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/340 (36%), Positives = 174/340 (51%), Gaps = 32/340 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + + +VD T G GH+S +++ L IG D D A+ A+
Sbjct: 5 HYSVLLHETIDNLNL-KNDGVYVDATFGGGGHASYLLKQLSNGHL-IGFDQDEYAIELAK 62
Query: 176 AHLNSLLHGQAHPHLK-THTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+ +L + P L H N + + LG ID G+D I DLG+SS Q +
Sbjct: 63 KSFSEVLKANSKPKLSLVHDNFGNLQQNLAKLGFID------GIDGIYYDLGVSSPQFDQ 116
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
PERGFS + LDMRMD L A I+N+W E+ +L +YG+E + IV
Sbjct: 117 PERGFSYRFNARLDMRMDQTKDLDAYKIVNTWSQKELSNILFKYGDEKYARQIAKNIVAK 176
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +T ELVD+I+ P RR G A + FQA+RIAVNDEL+ LE SL
Sbjct: 177 RAIKPITTTFELVDIIKEAIPAF-ARRTGG-HPAKKSFQAIRIAVNDELEVLEKSLLDAI 234
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTF--LSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
+ L PGGR+ VI+F SLED+IVK+ F S +D R + D++ T
Sbjct: 235 EILKPGGRICVITFQSLEDKIVKKIFKKYSDVDIPRGMPQ---------IPDSLKPTL-- 283
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
KI++++PI + +E N R SAKLRV +K+
Sbjct: 284 --------KIISRKPIVATNKELEENNRSHSAKLRVAEKL 315
>gi|386857364|ref|YP_006261541.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Deinococcus gobiensis I-0]
gi|380000893|gb|AFD26083.1| S-adenosyl-L-methionine-dependent methyltransferase mraW
[Deinococcus gobiensis I-0]
Length = 286
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 119/315 (37%), Positives = 162/315 (51%), Gaps = 56/315 (17%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
FVD TLG AGH+ ++ A + G+D DP AL +ARA LH
Sbjct: 18 FVDGTLGGAGHTRLLLGAGATV---YGIDQDPYALERARAARIPGLH----------VLE 64
Query: 197 KNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQAS 256
N+R + ++L E + + VD +L+D+G+SS Q+++ ERGFS + PLDMRM Q+
Sbjct: 65 GNYRDMAALLAA--EGVTQ--VDGVLLDIGVSSFQLDDGERGFSYHTEAPLDMRMS-QSG 119
Query: 257 LKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPG 316
A D++N++ +A++ ++ EYGE+ + IV AR + + +T L D+++ PG
Sbjct: 120 ESAADVVNTYDEADLAAIIYEYGEDRLSRRIARAIVYAREKAPIETTVALADIVKRAYPG 179
Query: 317 MRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIV 376
I A R FQALRI VNDEL L + L A L PGGRL VISFHSLEDRIV
Sbjct: 180 F----SKGIHPARRTFQALRIHVNDELGALRAGLEAAEGLLRPGGRLAVISFHSLEDRIV 235
Query: 377 KQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEER 436
K+ L +ET LTKRP+ S EE+
Sbjct: 236 KRYLLG------------------------SETLTP----------LTKRPLVASEEEQA 261
Query: 437 LNCRCRSAKLRVIQK 451
N R RSAKLR QK
Sbjct: 262 GNPRARSAKLRSAQK 276
>gi|311742808|ref|ZP_07716616.1| S-adenosyl-methyltransferase MraW [Aeromicrobium marinum DSM 15272]
gi|311313488|gb|EFQ83397.1| S-adenosyl-methyltransferase MraW [Aeromicrobium marinum DSM 15272]
Length = 325
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/278 (38%), Positives = 153/278 (55%), Gaps = 24/278 (8%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFV----DCTLGAAGHSSAIIRAHPELKLHIGVDVDP 168
+ SH+PV L VLD+ + + D TLG GH++A+++ P+L++ +G+D DP
Sbjct: 11 RPSHVPVALDRVLDLLAPAVEAAGEAAVVVDTTLGLGGHTAAMLQRFPDLRV-VGIDRDP 69
Query: 169 SALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGV---DAILMDL 225
AL A L + A + +V +I + + +GV D +L DL
Sbjct: 70 DALRLAAERLADV--------------AGRVTLVHAVYDRIADALDEAGVERVDGVLFDL 115
Query: 226 GMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWH 285
G+SSMQ++ ERGF+ D PLDMRMDP + A ++LN++ ++ RVLR YGEE
Sbjct: 116 GVSSMQLDVGERGFAYAQDAPLDMRMDPTTGITAAEVLNTYAAGDLARVLRTYGEEKFAR 175
Query: 286 LLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKT 345
+ + +V R ++ LVDL++ P RR G A R FQALRI VNDEL
Sbjct: 176 RIADAVVAERDEHPFDTSPRLVDLVRRSIPAA-ARRTGG-NPAKRTFQALRIEVNDELGA 233
Query: 346 LESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSI 383
E +L A L PGGR+ V+++HSLEDRI K+TF I
Sbjct: 234 YERALPAALSALRPGGRVVVLAYHSLEDRITKRTFARI 271
>gi|15675533|ref|NP_269707.1| S-adenosyl-methyltransferase MraW [Streptococcus pyogenes SF370]
gi|19746583|ref|NP_607719.1| S-adenosyl-methyltransferase MraW [Streptococcus pyogenes MGAS8232]
gi|21910939|ref|NP_665207.1| S-adenosyl-methyltransferase MraW [Streptococcus pyogenes MGAS315]
gi|28895371|ref|NP_801721.1| S-adenosyl-methyltransferase MraW [Streptococcus pyogenes SSI-1]
gi|71904072|ref|YP_280875.1| S-adenosyl-methyltransferase MraW [Streptococcus pyogenes MGAS6180]
gi|71911181|ref|YP_282731.1| S-adenosyl-methyltransferase MraW [Streptococcus pyogenes MGAS5005]
gi|94988995|ref|YP_597096.1| S-adenosyl-methyltransferase MraW [Streptococcus pyogenes MGAS9429]
gi|94992888|ref|YP_600987.1| S-adenosyl-methyltransferase MraW [Streptococcus pyogenes MGAS2096]
gi|306826911|ref|ZP_07460211.1| S-adenosyl-methyltransferase MraW [Streptococcus pyogenes ATCC
10782]
gi|383480393|ref|YP_005389287.1| S-adenosyl-methyltransferase MraW [Streptococcus pyogenes
MGAS15252]
gi|383494375|ref|YP_005412051.1| S-adenosyl-methyltransferase MraW [Streptococcus pyogenes MGAS1882]
gi|13622733|gb|AAK34428.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS]
gi|19748798|gb|AAL98218.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232]
gi|21905146|gb|AAM80010.1| putative S-adenosyl-methyltransferase MraW [Streptococcus pyogenes
MGAS315]
gi|28810617|dbj|BAC63554.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1]
gi|71803167|gb|AAX72520.1| S-adenosyl-methyltransferase [Streptococcus pyogenes MGAS6180]
gi|71853963|gb|AAZ51986.1| S-adenosyl-methyltransferase [Streptococcus pyogenes MGAS5005]
gi|94542503|gb|ABF32552.1| S-adenosyl-methyltransferase [Streptococcus pyogenes MGAS9429]
gi|94544503|gb|ABF34551.1| S-adenosyl-methyltransferase mraW [Streptococcus pyogenes
MGAS10270]
gi|94546396|gb|ABF36443.1| S-adenosyl-methyltransferase mraW [Streptococcus pyogenes MGAS2096]
gi|304430929|gb|EFM33938.1| S-adenosyl-methyltransferase MraW [Streptococcus pyogenes ATCC
10782]
gi|378928383|gb|AFC66589.1| S-adenosyl-methyltransferase MraW [Streptococcus pyogenes
MGAS15252]
gi|378930102|gb|AFC68519.1| S-adenosyl-methyltransferase MraW [Streptococcus pyogenes MGAS1882]
gi|395454425|dbj|BAM30764.1| S-adenosyl-methyltransferase [Streptococcus pyogenes M1 476]
Length = 337
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 119/348 (34%), Positives = 188/348 (54%), Gaps = 37/348 (10%)
Query: 109 IQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDP 168
+ ++ H+ V+L E +D+ + +VD TLG +GHS+ ++ E D D
Sbjct: 21 VMTKEFHHVTVLLHETVDMLDI-KPDGIYVDATLGGSGHSAYLLSKLGEEGHLYCFDQDQ 79
Query: 169 SALAKARAHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQ--IDENILRSGVDAILMD 224
A+ A+ L S + GQ TF K NFRH+K+ L +DE +D IL D
Sbjct: 80 KAIDNAQVTLKSYIDKGQV-------TFIKDNFRHLKARLTALGVDE------IDGILYD 126
Query: 225 LGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNW 284
LG+SS Q++ ERGFS D PLDMRMD Q+ L A +++N++P ++ ++ +YGE+
Sbjct: 127 LGVSSPQLDERERGFSYKQDAPLDMRMDRQSLLTAYEVVNTYPFNDLVKIFFKYGEDKFS 186
Query: 285 HLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELK 344
+ KI QAR + +T EL +LI++ P +++G A ++FQA+RI VNDEL
Sbjct: 187 KQIARKIEQARAIKPIETTTELAELIKAAKPAKELKKKGH--PAKQIFQAIRIEVNDELG 244
Query: 345 TLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDD 404
+ S+ + LA GR+ VI+FHSLEDR+ KQ F +E + + + + +
Sbjct: 245 AADESIQDAMELLALDGRISVITFHSLEDRLTKQLF-------KEASTVDVPKGLPLIPE 297
Query: 405 NINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++ + ++++++PI PS E N R SAKLRV +KI
Sbjct: 298 DMKPKF----------ELVSRKPILPSHSELTANKRAHSAKLRVAKKI 335
>gi|322436313|ref|YP_004218525.1| S-adenosyl-methyltransferase MraW [Granulicella tundricola
MP5ACTX9]
gi|321164040|gb|ADW69745.1| S-adenosyl-methyltransferase MraW [Granulicella tundricola
MP5ACTX9]
Length = 297
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 119/339 (35%), Positives = 175/339 (51%), Gaps = 49/339 (14%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+PV+L E L+ + + R +VD TLG GHSSAI + I D DP A++KA+
Sbjct: 6 HVPVLLEEALE-YLNVRPGGVYVDATLGLGGHSSAIAKKLGGQGKLIAFDRDPDAMSKAQ 64
Query: 176 AHLNSLLH--GQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
A L +L G P ++ A + + I + +D +L D G+SSMQ++
Sbjct: 65 ARLEALKEELGAEMPTVQFEPRA---------FSEAGDAIAKGSLDGLLADFGVSSMQLD 115
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
RGFS DGPLDMRMD ++ A ++N + E+ ++ E+GEE + IV+
Sbjct: 116 EAHRGFSFRSDGPLDMRMDTRSGETAGQVVNEEDENELADLIYEFGEERRSRRIARAIVR 175
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +T EL +I + P M+G + I ATR FQA+R+ VNDEL ++S L +
Sbjct: 176 AR---PISTTAELARIISAAAPPMKGDK---IHPATRTFQAIRMRVNDELGEIQSLLKSA 229
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
L PGGRL +ISFHSLEDR+VK F R+
Sbjct: 230 GSLLKPGGRLVMISFHSLEDRLVKDAF-------------------------------RE 258
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ + +LTK+P+ + +E N R RSAKLR ++K+
Sbjct: 259 LGRDKKFTVLTKKPVIAAEQESLRNPRSRSAKLRALEKV 297
>gi|384109302|ref|ZP_10010182.1| S-adenosyl-methyltransferase MraW [Treponema sp. JC4]
gi|383869179|gb|EID84798.1| S-adenosyl-methyltransferase MraW [Treponema sp. JC4]
Length = 328
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 121/343 (35%), Positives = 167/343 (48%), Gaps = 39/343 (11%)
Query: 116 HIPVMLGEVLDVFSS----SRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
H PV+L E L+ + VD T G GHS + P L+L+ +D DP
Sbjct: 5 HTPVLLNECLEYLAPLGEPYENHAVMVDSTTGEGGHSFNFLTKFPNLELNC-LDADPVIQ 63
Query: 172 AKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQ 231
A+A+ L + H ++ F+ + D D IL DLG+S
Sbjct: 64 ARAKERLAPFGD-------RVHFYSGWFQDFYA-----DYPSDFKKPDIILFDLGISVFH 111
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
ERGFS D LDMR++ A A D++N+ P+ ++ ++ YGEE + I
Sbjct: 112 YEKSERGFSFRYDEKLDMRLNENAGESAADLVNNLPEEKLADLIYLYGEEKLSRRIAKAI 171
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
AR G + S+ L ++I + P R G I ATR FQALRIAVN ELK L +LH
Sbjct: 172 CDARNGGKIESSKNLAEIIWNAVPA--NYRYGQIHPATRTFQALRIAVNGELKRLPQALH 229
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
F+CL GG++GVI+FHSLEDRIVK F RN+ + +
Sbjct: 230 NAFNCLNVGGKMGVITFHSLEDRIVKNYF------------------RNLGKQCVCPPEV 271
Query: 412 RQIIQGWN--GKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
Q G +ILT++P+ PS EE + N RSAKLRV++KI
Sbjct: 272 AQCRCGGKECAEILTRKPVCPSEEEIKTNSPSRSAKLRVVKKI 314
>gi|357637190|ref|ZP_09135065.1| S-adenosyl-methyltransferase MraW [Streptococcus macacae NCTC
11558]
gi|357585644|gb|EHJ52847.1| S-adenosyl-methyltransferase MraW [Streptococcus macacae NCTC
11558]
Length = 316
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/339 (36%), Positives = 177/339 (52%), Gaps = 33/339 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+L E +D+ + + +VD TLG GHSS ++ + D D AL A+
Sbjct: 7 HITVLLHETVDMLAI-KPDGIYVDATLGGGGHSSYLLSKLSKKGHLYCFDQDQKALDHAK 65
Query: 176 AHLNSLLH-GQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
L GQ +F K NFR++K+ L E I +D I DLG+SS Q +
Sbjct: 66 KRLKPYFEAGQV-------SFIKDNFRNLKACLAA--EGIFE--IDGICYDLGVSSPQFD 114
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
+RGFS + PLDMRM+ +A L A D++N++ ++ R+ +YGE+ + KI
Sbjct: 115 EGKRGFSYKKEAPLDMRMNQEADLTAFDVVNTYDYHDLVRIFFKYGEDKFSKQIARKIET 174
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +T EL +LI+S P R++G A ++FQA+RI VNDEL + SL
Sbjct: 175 ARKEKPIETTAELAELIKSAKPAKELRKKGH--PAKQIFQAIRIEVNDELSAIAESLRQA 232
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
D L GRL VI+FHSLEDR+VKQ F +E E N + + +++ +
Sbjct: 233 LDLLTIDGRLSVITFHSLEDRLVKQAF-------KEVTEVNLPKGLPLIPEDLQPKF--- 282
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++ ++PI PS E N R SAKLRVIQKI
Sbjct: 283 -------SLVNRKPILPSQGELSDNNRAHSAKLRVIQKI 314
>gi|313884959|ref|ZP_07818711.1| S-adenosyl-methyltransferase MraW [Eremococcus coleocola
ACS-139-V-Col8]
gi|312619650|gb|EFR31087.1| S-adenosyl-methyltransferase MraW [Eremococcus coleocola
ACS-139-V-Col8]
Length = 318
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/337 (36%), Positives = 173/337 (51%), Gaps = 30/337 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRA-HPELKLHIGVDVDPSALAKA 174
H V+L E +D + +VDCTLG AGH++ ++ P+ L+ D D +A+ A
Sbjct: 6 HTSVLLHETIDQLDINPN-GIYVDCTLGGAGHAAYLLSLLSPKGHLY-AFDQDMNAIKNA 63
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+ L+ + + NF +K L + S VD I DLG+SS Q++
Sbjct: 64 QDRLHDYIEKD-----QVTFIHANFAQLKEQLAERG----VSYVDGIYYDLGVSSPQLDQ 114
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS + PLDMRM+ + L A +I+N WP ++ +++ YGEE + I QA
Sbjct: 115 AERGFSYKKEAPLDMRMNQEDKLTAYEIVNEWPYEKIVKIIDHYGEERFAKRITRAIEQA 174
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +T EL ++++ P R G A R FQA+RIAVNDEL +E+SL+ F
Sbjct: 175 RKNKPIETTLELAEIVKEAIPAATRRSGG--HPAKRTFQAIRIAVNDELNVIETSLNQAF 232
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
L GGR+ VISFHSLEDRIVKQ F +R D N L + +
Sbjct: 233 TLLKVGGRISVISFHSLEDRIVKQLFRD--KSSRPDLPPNLPILPERTEADF-------- 282
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
++ ++PI S EE N R RSAKLRVIQ+
Sbjct: 283 ------ALVNRKPILASQEELDENNRSRSAKLRVIQR 313
>gi|352516926|ref|YP_004886243.1| methyltransferase MraW [Tetragenococcus halophilus NBRC 12172]
gi|348601033|dbj|BAK94079.1| methyltransferase MraW [Tetragenococcus halophilus NBRC 12172]
Length = 315
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/320 (38%), Positives = 173/320 (54%), Gaps = 33/320 (10%)
Query: 136 SFVDCTLGAAGHSSAIIRAHPELKLHI-GVDVDPSALAKARAHLNSLL-HGQAHPHLKTH 193
++VDCTLG AGHS ++ L H+ D D A+ A+ L + +GQ
Sbjct: 23 TYVDCTLGGAGHSQYLLE-QLALDGHLYAFDQDQKAIDYAKKRLAHYVENGQV------- 74
Query: 194 TFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMD 252
TF K NFR IK L +++ N VD DLG+SS Q++ +RGFS + PLDMRMD
Sbjct: 75 TFIKRNFRFIKEELEKLNVN----KVDGFFYDLGVSSPQLDEAQRGFSYHQEAPLDMRMD 130
Query: 253 PQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQS 312
+L A +++N + ++ ++ YGEE + KI R + +T +LVD+I+
Sbjct: 131 QSQTLSAYEVVNEYDYQQLVKIFFRYGEERFSKQIARKIEATRKNQPIETTTQLVDVIKE 190
Query: 313 VTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLE 372
P R+ G A RVFQA+RIAVNDEL +E SL + LA GR+ VI+FHSLE
Sbjct: 191 AIPAPARRKGGH--PAKRVFQAIRIAVNDELGAIEESLEQAIEILAINGRIAVITFHSLE 248
Query: 373 DRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSA 432
DRI K F +++R A+ L I DD + I+ ++ ++PI P+
Sbjct: 249 DRIAKNIFK---EYSR--AKETPPGLPVIPDD------FQPIL-----ALVNRKPILPTE 292
Query: 433 EEERLNCRCRSAKLRVIQKI 452
EE + N R RSAKLRV +KI
Sbjct: 293 EEIKKNNRSRSAKLRVAKKI 312
>gi|347758657|ref|YP_004866219.1| S-adenosyl-methyltransferase MraW [Micavibrio aeruginosavorus
ARL-13]
gi|347591175|gb|AEP10217.1| S-adenosyl-methyltransferase MraW [Micavibrio aeruginosavorus
ARL-13]
Length = 335
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/346 (35%), Positives = 179/346 (51%), Gaps = 46/346 (13%)
Query: 111 QQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSA 170
Q + HIPVML EVL + T +VD T GA G+S A + P ++ +G+D D +A
Sbjct: 3 QDTAPHIPVMLDEVLTALAPVAGET-YVDGTFGAGGYSRATLDRAPGCRI-VGIDRDQTA 60
Query: 171 LAKARAHLNS------LLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAI--- 221
+A A ++ LLHG F +++ +L Q +G+D +
Sbjct: 61 HDRAVAWKDTYGDKLILLHG-------------TFGNVRDLLDQ-------AGIDRVQGF 100
Query: 222 LMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEE 281
++D+G+SSMQ++N +RGFS DGPLDMRMD A A DI+ + ++ ++ YGEE
Sbjct: 101 MLDIGVSSMQIDNADRGFSFRFDGPLDMRMDQSAGESAADIVRDMDETDLANLIYNYGEE 160
Query: 282 SNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVND 341
+ + IV AR+ + +T L +++ PG R+ I ATR FQALRIAVND
Sbjct: 161 RHSRRIARAIVDARVVAPIETTAALASIVEKAMPGR--RKPNDIHPATRTFQALRIAVND 218
Query: 342 ELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNI 401
EL LE +L A L GGRL V++FHSLEDRIVK F + + + +
Sbjct: 219 ELGELERALAASEHILEEGGRLVVVTFHSLEDRIVKNFFKT---RSGDVPAPSRHAPMTA 275
Query: 402 RDDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLR 447
D+ T+ ++ ++ I P+ E R N R RSAKLR
Sbjct: 276 LSDHPAPTF----------RLTQRKAIDPTDAETRRNPRSRSAKLR 311
>gi|421892871|ref|ZP_16323468.1| rRNA small subunit methyltransferase H [Streptococcus pyogenes
NS88.2]
gi|379981336|emb|CCG27190.1| rRNA small subunit methyltransferase H [Streptococcus pyogenes
NS88.2]
Length = 337
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 119/348 (34%), Positives = 188/348 (54%), Gaps = 37/348 (10%)
Query: 109 IQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDP 168
+ ++ H+ V+L E +D+ + +VD TLG +GHS+ ++ E D D
Sbjct: 21 VMTKEFHHVTVLLHETVDMLDI-KPDGIYVDATLGGSGHSAYLLSKLGEEGHLYCFDQDQ 79
Query: 169 SALAKARAHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQ--IDENILRSGVDAILMD 224
A+ A+ L S + GQ TF K NFRH+K+ L +DE +D IL D
Sbjct: 80 KAIDNAQVTLQSYIDKGQV-------TFIKDNFRHLKARLTALGVDE------IDGILYD 126
Query: 225 LGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNW 284
LG+SS Q++ ERGFS D PLDMRMD Q+ L A +++N++P ++ ++ +YGE+
Sbjct: 127 LGVSSPQLDERERGFSYKQDAPLDMRMDRQSLLTAYEVVNTYPFNDLVKIFFKYGEDKFS 186
Query: 285 HLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELK 344
+ KI QAR + +T EL +LI++ P +++G A ++FQA+RI VNDEL
Sbjct: 187 KQIARKIEQARAIKPIETTTELAELIKAAKPAKELKKKGH--PAKQIFQAIRIEVNDELG 244
Query: 345 TLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDD 404
+ S+ + LA GR+ VI+FHSLEDR+ KQ F +E + + + + +
Sbjct: 245 AADESIQDAMELLALDGRISVITFHSLEDRLTKQLF-------KEASTVDVPKGLPLIPE 297
Query: 405 NINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++ + ++++++PI PS E N R SAKLRV +KI
Sbjct: 298 DMKPKF----------ELVSRKPILPSHSELTANKRAHSAKLRVAKKI 335
>gi|450047256|ref|ZP_21839361.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans N34]
gi|449197790|gb|EMB98938.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans N34]
Length = 316
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 124/341 (36%), Positives = 178/341 (52%), Gaps = 37/341 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+L E +D+ + +VD TLG AGHS ++ + D D A+ A+
Sbjct: 7 HITVLLHETIDMLDI-KPDGIYVDATLGGAGHSECLLSKLGKEGHLYCFDQDQKAIDNAK 65
Query: 176 AHLNSLLH-GQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
L + GQ +F K NFRH+KS L DE I +D I DLG+SS Q++
Sbjct: 66 IRLQQYVKTGQV-------SFIKDNFRHLKSRLA--DEGIYE--IDGICYDLGVSSPQLD 114
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
ERGFS D PLDMRM+ A L A D++N++ ++ R+ +YGE+ + KI
Sbjct: 115 ERERGFSYKKDAPLDMRMNQDAQLTAFDVVNTYDYRDLVRLFFKYGEDKFSKQIARKIES 174
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +T EL ++I+S P +++G A ++FQA+RI VNDEL E SL
Sbjct: 175 ARKEKLIETTAELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAAEESLTQA 232
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTF--LSIIDHNREDAEGNEEELRNIRDDNINETWI 411
D LA GR+ VI+FHSLEDR+ KQ F ++ +D R ++
Sbjct: 233 LDLLALNGRIAVITFHSLEDRLTKQLFKEVTTLDVPR------------------GLPFV 274
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ +Q ++ ++PI P+ E N R SAKLRVIQKI
Sbjct: 275 PENLQP-KFSLVNRKPILPNVRELSENNRAHSAKLRVIQKI 314
>gi|344999123|ref|YP_004801977.1| S-adenosyl-methyltransferase MraW [Streptomyces sp. SirexAA-E]
gi|344314749|gb|AEN09437.1| S-adenosyl-methyltransferase MraW [Streptomyces sp. SirexAA-E]
Length = 321
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/276 (38%), Positives = 151/276 (54%), Gaps = 25/276 (9%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITS-----FVDCTLGAAGHSSAIIRAHPELKLHIGVDVD 167
Q+ H+PVML LD+ + + T VDCTLG GHS A++ A PE +L I +D D
Sbjct: 3 QTRHVPVMLQRCLDLLAPALEATGPRPPVVVDCTLGLGGHSEALLSAFPEARL-IALDRD 61
Query: 168 PSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG---VDAILMD 224
AL L G+ + + + +V ++ E + R G V +L D
Sbjct: 62 KEALR---------LSGE-----RLAAYGDRATLVHAVYDELPEVLDRLGIPKVQGVLFD 107
Query: 225 LGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNW 284
LG+SSMQ++ +RGF+ D PLDMRMD + A ++LN++P E+ R+LR YGEE
Sbjct: 108 LGVSSMQLDEADRGFAYAQDAPLDMRMDQTTGIGAAEVLNTYPPGELVRILRAYGEEKQA 167
Query: 285 HLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELK 344
+ + +V+ R + ++ LV+LI+ P R G A R FQALRI VN EL
Sbjct: 168 KRIVSAVVREREKEPFSNSARLVELIRDSLPQAAKRTGG--NPAKRTFQALRIEVNGELT 225
Query: 345 TLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTF 380
LE ++ A LA GGR+ V+S+HSLEDR+VKQ
Sbjct: 226 VLERAIPAAVRSLAVGGRIAVLSYHSLEDRLVKQVL 261
>gi|422341701|ref|ZP_16422641.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Treponema
denticola F0402]
gi|325473769|gb|EGC76957.1| S-adenosyl-L-methionine-dependent methyltransferase mraW [Treponema
denticola F0402]
Length = 315
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 125/345 (36%), Positives = 170/345 (49%), Gaps = 41/345 (11%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
Q H V+L E L+ + FVD TLG GH+ A ++ +P+L IGVD D S
Sbjct: 2 QPVHTSVLLEECLEFLKPDVSDNLFVDGTLGEGGHTEAFLKRYPQLNA-IGVDADVSIQE 60
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDA-----ILMDLGM 227
+A+ L G+ I+ LG DE D+ IL+DLG+
Sbjct: 61 RAKERLKPF--GE---------------RIRFHLGWSDEFFKNYPKDSAPPNLILLDLGI 103
Query: 228 SSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLL 287
S RGFS D PLDMR++P+ L A DI+NS+ + ++ ++ YGEE +
Sbjct: 104 SMFHYVKSGRGFSFSSDEPLDMRLNPELRLSAADIVNSYNEKDLADLIFNYGEERYSRKI 163
Query: 288 QNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLE 347
++IV+ R + EL D I P + R G I AT+ FQALRIAVN EL L
Sbjct: 164 ASRIVEQRAAAAFSTAKELADCIYKAVP--QNYRHGKIHPATKTFQALRIAVNGELDRLP 221
Query: 348 SSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNIN 407
L A F LAP GRLG+I+FHSLEDRIVK F + + + I
Sbjct: 222 RLLEAAFSVLAPNGRLGLITFHSLEDRIVKFYFKEL-----------GKSCTCPENMPIC 270
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ R ++LTK+ + S EE RLN RSA+LRV++KI
Sbjct: 271 KCGGRP-----RAEVLTKKAVKASDEEIRLNPPSRSARLRVVRKI 310
>gi|259501653|ref|ZP_05744555.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Lactobacillus iners DSM 13335]
gi|302191140|ref|ZP_07267394.1| S-adenosyl-methyltransferase MraW [Lactobacillus iners AB-1]
gi|259166938|gb|EEW51433.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Lactobacillus iners DSM 13335]
Length = 315
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/340 (36%), Positives = 174/340 (51%), Gaps = 32/340 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + + +VD T G GH+S +++ L IG D D A+ A+
Sbjct: 5 HYSVLLHETIDNLNL-KNDGVYVDATFGGGGHASYLLKQLSNGHL-IGFDQDEYAIELAK 62
Query: 176 AHLNSLLHGQAHPHLK-THTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+ +L + P L H N + + LG ID G+D I DLG+SS Q +
Sbjct: 63 KSFSEVLKANSKPKLSLVHDNFGNLQQNLAKLGFID------GIDGIYYDLGVSSPQFDQ 116
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
PERGFS + LDMRMD L A I+N+W E+ +L +YG+E + IV
Sbjct: 117 PERGFSYRFNARLDMRMDQTKDLDAYKIVNTWSQKELSNILFKYGDEKYARQIAKNIVAK 176
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +T ELVD+I+ P RR G A + FQA+RIAVNDEL+ LE SL
Sbjct: 177 RAIKPITTTFELVDIIKEAIPAF-ARRTGG-HPAKKSFQAIRIAVNDELEVLEKSLLDAI 234
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTF--LSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
+ L PGGR+ VI+F SLED+IVK+ F S +D R + D++ T
Sbjct: 235 EILKPGGRICVITFQSLEDKIVKKIFKKYSDVDIPRGMPQ---------IPDSLKPTL-- 283
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
KI++++PI + +E N R SAKLRV +K+
Sbjct: 284 --------KIISRKPIVATDKELEENNRSHSAKLRVAEKL 315
>gi|421205801|ref|ZP_15662867.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
2090008]
gi|421229010|ref|ZP_15685688.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
2061376]
gi|421291139|ref|ZP_15741883.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA56348]
gi|421311034|ref|ZP_15761647.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA58981]
gi|395577828|gb|EJG38362.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
2090008]
gi|395598677|gb|EJG58878.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
2061376]
gi|395896939|gb|EJH07904.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA56348]
gi|395913994|gb|EJH24843.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA58981]
Length = 316
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 186/345 (53%), Gaps = 45/345 (13%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 7 HVTVLLHETIDMLDV-KPDGIYVDATLGGAGHSEYLLSKLSEKGHLYAFDQDQNAIDNAQ 65
Query: 176 AHLNSLLHGQAHPHLKTH--TFAK-NFRHIKSVLGQIDENILRSGV---DAILMDLGMSS 229
L P+++ TF K NFRH+++ L + +GV D I DLG+SS
Sbjct: 66 KRLA--------PYIEKGMVTFIKDNFRHLQARLRE-------AGVQEIDGICYDLGVSS 110
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
Q++ ERGFS D PLDMRM+ ASL A +++N++ ++ R+ +YGE+ +
Sbjct: 111 PQLDQRERGFSYKKDAPLDMRMNQDASLTAYEVVNNYDYHDLVRIFFKYGEDKFSKQIAR 170
Query: 290 KIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESS 349
KI QAR + +T EL ++I+ V P +++G A ++FQA+RI VNDEL + S
Sbjct: 171 KIEQAREVKPIETTTELAEIIKLVKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADES 228
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNIN 407
+ D LA GR+ VI+FHSLEDR+ KQ F ++A E + L I DD
Sbjct: 229 IQQAMDMLALDGRISVITFHSLEDRLTKQLF--------KEASTVEVPKGLPFIPDD--- 277
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ ++++++PI PSAEE N R SAKLRV++KI
Sbjct: 278 --------RKPKMELVSRKPILPSAEELEANNRSHSAKLRVVRKI 314
>gi|312873217|ref|ZP_07733273.1| S-adenosyl-methyltransferase MraW [Lactobacillus iners LEAF
2052A-d]
gi|312874604|ref|ZP_07734628.1| S-adenosyl-methyltransferase MraW [Lactobacillus iners LEAF
2053A-b]
gi|325911728|ref|ZP_08174135.1| S-adenosyl-methyltransferase MraW [Lactobacillus iners UPII 143-D]
gi|311089834|gb|EFQ48254.1| S-adenosyl-methyltransferase MraW [Lactobacillus iners LEAF
2053A-b]
gi|311091228|gb|EFQ49616.1| S-adenosyl-methyltransferase MraW [Lactobacillus iners LEAF
2052A-d]
gi|325476494|gb|EGC79653.1| S-adenosyl-methyltransferase MraW [Lactobacillus iners UPII 143-D]
Length = 317
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/340 (36%), Positives = 174/340 (51%), Gaps = 32/340 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + + +VD T G GH+S +++ L IG D D A+ A+
Sbjct: 7 HYSVLLHETIDNLNL-KNDGVYVDATFGGGGHASYLLKQLSNGHL-IGFDQDEYAIELAK 64
Query: 176 AHLNSLLHGQAHPHLK-THTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+ +L + P L H N + + LG ID G+D I DLG+SS Q +
Sbjct: 65 KSFSEVLKANSKPKLSLVHDNFGNLQQNLAKLGFID------GIDGIYYDLGVSSPQFDQ 118
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
PERGFS + LDMRMD L A I+N+W E+ +L +YG+E + IV
Sbjct: 119 PERGFSYRFNARLDMRMDQTKDLDAYKIVNTWSQKELSNILFKYGDEKYARQIAKNIVAK 178
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +T ELVD+I+ P RR G A + FQA+RIAVNDEL+ LE SL
Sbjct: 179 RAIKPITTTFELVDIIKEAIPAF-ARRTGG-HPAKKSFQAIRIAVNDELEVLEKSLLDAI 236
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTF--LSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
+ L PGGR+ VI+F SLED+IVK+ F S +D R + D++ T
Sbjct: 237 EILKPGGRICVITFQSLEDKIVKKIFKKYSDVDIPRGMPQ---------IPDSLKPTL-- 285
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
KI++++PI + +E N R SAKLRV +K+
Sbjct: 286 --------KIISRKPIVATNKELEENNRSHSAKLRVAEKL 317
>gi|452964151|gb|EME69198.1| 16S rRNA m(4)C1402 methyltransferase [Magnetospirillum sp. SO-1]
Length = 318
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 118/342 (34%), Positives = 173/342 (50%), Gaps = 41/342 (11%)
Query: 114 SSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHI-GVDVDPSALA 172
+ HIPV+L EV+ + R +VD T GA G+S A++ A + +D DP+A+
Sbjct: 4 APHIPVLLAEVIAALAL-RDGGVYVDGTFGAGGYSRAMLSAA---ACRVWAIDRDPTAVE 59
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGV---DAILMDLGMSS 229
+ + + + F I+ G +D + GV D I +D+G+SS
Sbjct: 60 RGK--------------ILEEGSSGRFSMIEGRFGDMDALLRVQGVNQVDGIALDIGVSS 105
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
MQ++ P+RGFS DGPLDMRM+ + A D++N P+ ++ ++ YGEE +
Sbjct: 106 MQIDQPKRGFSFAKDGPLDMRMEAKGP-SAADMVNDTPEGDLANIIYRYGEERLSRRVAK 164
Query: 290 KIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESS 349
IV+AR TGEL ++I+ V P R I ATR FQALRIAVNDEL LE
Sbjct: 165 AIVEARRLKRFERTGELAEVIRKVVP----RSGDGIDPATRTFQALRIAVNDELGELERG 220
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINET 409
L A LAPGG L V++FHSLEDR+VK + +A + + +
Sbjct: 221 LEAAERLLAPGGILAVVTFHSLEDRVVK----GFLKARAGEAARPSRHVPQAQGTGPAAS 276
Query: 410 WIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ +L+++ + P+ EE R N R RSAKLR +
Sbjct: 277 F----------ALLSRKAVAPAPEEARANPRARSAKLRAAAR 308
>gi|50955157|ref|YP_062445.1| S-adenosyl-methyltransferase MraW [Leifsonia xyli subsp. xyli str.
CTCB07]
gi|54036175|sp|Q6AE56.1|RSMH_LEIXX RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|50951639|gb|AAT89340.1| S-adenosyl-methyltransferase [Leifsonia xyli subsp. xyli str.
CTCB07]
Length = 325
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/267 (42%), Positives = 148/267 (55%), Gaps = 17/267 (6%)
Query: 116 HIPVMLGEVLDVFSSS--RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAK 173
H+PV+L +++ + + VD TLG GHS+ I+ P+ L +G+D DP ALA
Sbjct: 10 HLPVLLERCIELLAPALQEPGAVIVDATLGMGGHSAGILARFPQATL-VGLDRDPDALAI 68
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
A L HL HT R LG + V +L DLG+SS+Q++
Sbjct: 69 AGERLARF---GDRVHL-VHTVYDGIREALDGLGIAE-------VQGVLFDLGVSSLQLD 117
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
ERGFS D PLDMRMD + L AE +L +P+A++ R+ R+YGEE +IV
Sbjct: 118 RVERGFSYSKDAPLDMRMDGTSDLTAERVLAEYPEADLRRIFRDYGEEKLAARYAQRIVA 177
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR +G + +GELV L+Q TP RQG A RVFQALRI VN EL LE +L A
Sbjct: 178 ARQQGPITRSGELVHLLQRATPAAIA-RQGH--PAKRVFQALRIEVNQELAVLERALPAA 234
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTF 380
D LA GGRL V S+ SLEDRIVK+
Sbjct: 235 VDALAVGGRLVVESYQSLEDRIVKREL 261
>gi|392987373|ref|YP_006485966.1| 16S rRNA m(4)C1402 methyltransferase [Enterococcus hirae ATCC 9790]
gi|392334793|gb|AFM69075.1| 16S rRNA m(4)C1402 methyltransferase [Enterococcus hirae ATCC 9790]
Length = 319
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 126/340 (37%), Positives = 177/340 (52%), Gaps = 35/340 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H VML E +D + + +VDCTLG AGHS ++ D D A+ A+
Sbjct: 7 HYTVMLKETVDGLNI-KPDGIYVDCTLGGAGHSEYLLSQLNTNGHLYAFDQDQKAIDHAK 65
Query: 176 AHLNSLLHGQAHPHLKTH--TFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
L P+++ TF K NFR +++ +I E++ VD IL DLG+SS Q+
Sbjct: 66 VRLA--------PYIEKGMVTFIKANFRELEA---KIKEHV--PQVDGILYDLGVSSPQL 112
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ ERGFS D LDMRMD A L A D++N + E+ ++ YGEE + +I
Sbjct: 113 DEAERGFSYHQDALLDMRMDQSAPLSAYDVVNEYSYNELVKIFFRYGEEKFSKQIAREIE 172
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
+ R + +TGELV++I+ V P R+ G A R+FQA+RIAVNDEL E+SL
Sbjct: 173 RVRKIHPIQTTGELVEIIKDVIPAPARRKGGH--PAKRIFQAIRIAVNDELGAEEASLEQ 230
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
L GR+ VI+FHSLEDRIVK F +E ++D +
Sbjct: 231 AIRLLKINGRISVITFHSLEDRIVKSMF---------------KEYSTVQDLPPGLPVVP 275
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ Q K++ ++PI PS EE N R RSAKLR+ +KI
Sbjct: 276 EEFQP-ELKLINRKPILPSEEELSENNRSRSAKLRIAEKI 314
>gi|385799621|ref|YP_005836025.1| S-adenosyl-methyltransferase MraW [Halanaerobium praevalens DSM
2228]
gi|309388985|gb|ADO76865.1| S-adenosyl-methyltransferase MraW [Halanaerobium praevalens DSM
2228]
Length = 310
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/343 (35%), Positives = 182/343 (53%), Gaps = 37/343 (10%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
+ H V+L E +D + ++D TLG AGHSS I+ E+ I +D D +A+
Sbjct: 2 EYKHQAVLLKEAIDYLEIKKD-GIYLDGTLGRAGHSSEILHNLSEIGKLIALDRDTAAIK 60
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
+ + ++ + H+ NF+ + VL Q+ VD +L DLG+SS Q+
Sbjct: 61 AVESKFS-----KSKSLILKHS---NFQDLDQVLDQLK----IKAVDGMLFDLGVSSPQL 108
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHL-LQNKI 291
+NPERGFS +GPLDMRM+ SL A+ I+N++ AE+ +++ EYGEE NW + I
Sbjct: 109 DNPERGFSYQKNGPLDMRMNSSQSLTAKTIVNNYSAAELEKIITEYGEE-NWSARIAEFI 167
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
V+ R + +T +LV++I++ P R G A R FQALRI N+EL+ L++ +
Sbjct: 168 VKMRKEKVIETTDDLVEVIKAAIPKAVRRSGGH--PARRTFQALRIETNNELEQLKNLID 225
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNI--NET 409
L PGGRL +I+FHSLEDRIVK F R++ D +
Sbjct: 226 KAVSYLKPGGRLVIITFHSLEDRIVKHKF------------------RDLAKDCTCPPDF 267
Query: 410 WIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
I + K++TK PI S E+ N R RSAK+RV +KI
Sbjct: 268 PICVCDKKSEVKVITKSPIQASEIEKEGNPRSRSAKMRVAEKI 310
>gi|290961148|ref|YP_003492330.1| SAM-dependent methyltransferase [Streptomyces scabiei 87.22]
gi|260650674|emb|CBG73790.1| putative SAM-dependent methyltransferase [Streptomyces scabiei
87.22]
Length = 318
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/272 (39%), Positives = 151/272 (55%), Gaps = 22/272 (8%)
Query: 114 SSHIPVMLGEVLDVFSSSRTITS--FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
S H+PVML LD+ + + T VDCTLG GHS A++ PE +L + +D D AL
Sbjct: 4 SRHVPVMLQRCLDMLAPALTEPGAVVVDCTLGLGGHSEALLTRFPEARL-VALDRDKEAL 62
Query: 172 AKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG---VDAILMDLGMS 228
L G+ + F + + +V ++ E + R G V +L DLG+S
Sbjct: 63 R---------LSGE-----RLAPFGERATLVHAVYDELPEVLDRLGLPRVQGVLFDLGVS 108
Query: 229 SMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQ 288
SMQ++ +RGF+ D PLDMRMD + A ++LN++P E+ R+LR YGEE +
Sbjct: 109 SMQLDEADRGFAYAQDAPLDMRMDQTTGIGAAEVLNTYPAGELVRILRAYGEEKQAKRIV 168
Query: 289 NKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLES 348
+ IV+ R + ++ LV+LI+ P R G A R FQALRI VN EL LE
Sbjct: 169 SAIVRERDKEPFTNSARLVELIRDSLPQAAKRTGG--NPAKRTFQALRIEVNGELTVLER 226
Query: 349 SLHACFDCLAPGGRLGVISFHSLEDRIVKQTF 380
++ A LA GGR+ V+S+HSLEDR+VKQ F
Sbjct: 227 AVPAAVKALAVGGRIAVLSYHSLEDRLVKQVF 258
>gi|419799398|ref|ZP_14324747.1| S-adenosyl-methyltransferase MraW [Streptococcus parasanguinis
F0449]
gi|385698138|gb|EIG28522.1| S-adenosyl-methyltransferase MraW [Streptococcus parasanguinis
F0449]
Length = 316
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/343 (35%), Positives = 179/343 (52%), Gaps = 33/343 (9%)
Query: 112 QQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
++ H+ V+L E +D+ + +VD TLG AGHS ++ E D D A+
Sbjct: 3 KEFHHVTVLLHETIDMLDV-KPDGIYVDATLGGAGHSEYLLTKLNESGHLYAFDQDQHAI 61
Query: 172 AKARAHLNSLLH-GQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSS 229
A+ L + G TF K NFRH+K L ++ + +D I DLG+SS
Sbjct: 62 ENAKIRLAPFIEKGMV-------TFIKDNFRHLKERLNELG----VTEIDGICYDLGVSS 110
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
Q++ ERGFS D PLDMRM+ +ASL A +++NS+ ++ R+ +YGE+ +
Sbjct: 111 PQLDERERGFSYKKDAPLDMRMNQEASLTAYEVVNSYDYHDLVRIFFKYGEDKFSKQIAR 170
Query: 290 KIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESS 349
KI QAR + +T EL ++I+S P +++G A ++FQA+RI VNDEL + S
Sbjct: 171 KIEQARAIKPIETTTELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADES 228
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINET 409
+ D LA GR+ VI+FHSLEDR+ KQ F E +G L I DD
Sbjct: 229 IQQAMDLLAIDGRISVITFHSLEDRLTKQLFKEA--STVEVPKG----LPFIPDD----- 277
Query: 410 WIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+++ ++PI PS EE N R SAKLRV +KI
Sbjct: 278 ------LKPKMELVNRKPILPSEEELEDNNRSHSAKLRVARKI 314
>gi|357413910|ref|YP_004925646.1| S-adenosyl-methyltransferase MraW [Streptomyces flavogriseus ATCC
33331]
gi|320011279|gb|ADW06129.1| S-adenosyl-methyltransferase MraW [Streptomyces flavogriseus ATCC
33331]
Length = 321
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 121/350 (34%), Positives = 176/350 (50%), Gaps = 46/350 (13%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITS-----FVDCTLGAAGHSSAIIRAHPELKLHIGVDVD 167
Q+ H+PVML LD+ + + T VDCTLG GHS A++ A P +L + +D D
Sbjct: 3 QTRHVPVMLQRCLDLLAPALEATGPQPPVVVDCTLGLGGHSEALLAAFPAARL-VALDRD 61
Query: 168 PSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG---VDAILMD 224
AL L G+ + + + +V ++ E + R G V +L D
Sbjct: 62 KEALR---------LSGE-----RLAPYGDRATLVHAVYDELPEVLDRLGIPKVQGVLFD 107
Query: 225 LGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNW 284
LG+SSMQ++ +RGF+ D PLDMRMD + A ++LN++P E+ R+LR YGEE
Sbjct: 108 LGVSSMQLDEADRGFAYAQDAPLDMRMDQTTGIGAAEVLNTYPPGELVRILRAYGEEKQA 167
Query: 285 HLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELK 344
+ + +V+ R + ++ LV+LI+ P R G A R FQALRI VN EL
Sbjct: 168 KRIVSAVVREREKEPFSNSARLVELIRDSLPQAAKRTGG--NPAKRTFQALRIEVNGELT 225
Query: 345 TLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDD 404
LE ++ A LA GGR+ V+S+HSLEDR+VKQ F A G
Sbjct: 226 VLERAVPAAVRSLAVGGRIAVLSYHSLEDRLVKQVF----------AAGAA--------- 266
Query: 405 NINETWIRQIIQGWNG--KILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
N + + + + K+LT+ P+ EE N R A+LR Q+I
Sbjct: 267 NTAPPGLPVVPERYQPRLKLLTRGAELPTEEEVAENRRAAPARLRGAQRI 316
>gi|387625804|ref|YP_006061976.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae INV104]
gi|417693253|ref|ZP_12342442.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA47901]
gi|444383643|ref|ZP_21181828.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
PCS8106]
gi|444384921|ref|ZP_21183012.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
PCS8203]
gi|301793586|emb|CBW35963.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae INV104]
gi|332204336|gb|EGJ18401.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA47901]
gi|444248748|gb|ELU55249.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
PCS8106]
gi|444251681|gb|ELU58150.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
PCS8203]
Length = 316
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 125/345 (36%), Positives = 185/345 (53%), Gaps = 45/345 (13%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 7 HVTVLLHETIDMLDV-KPDGIYVDATLGGAGHSEYLLSKLSEKGHLYAFDQDQNAIDNAQ 65
Query: 176 AHLNSLLHGQAHPHLKTH--TFAK-NFRHIKSVLGQIDENILRSGV---DAILMDLGMSS 229
L P+++ TF K NFRH+++ L + +GV D I DLG+SS
Sbjct: 66 KRLA--------PYIEKGMVTFIKDNFRHLQARLRE-------AGVQEIDGICYDLGVSS 110
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
Q++ ERGFS D PLDMRM+ ASL A +++N++ ++ R+ +YGE+ +
Sbjct: 111 PQLDQRERGFSYKKDAPLDMRMNQDASLTAYEVVNNYDYHDLVRIFFKYGEDKFSKQIAR 170
Query: 290 KIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESS 349
KI QAR + +T EL ++I+ V P +++G A ++FQA+RI VNDEL + S
Sbjct: 171 KIEQAREVKPIETTTELAEIIKLVKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADES 228
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNIN 407
+H D LA GR+ VI+FHSLEDR+ KQ F ++A E + L I DD
Sbjct: 229 IHQAMDMLALDGRISVITFHSLEDRLTKQLF--------KEASTVEVPKGLPFIPDD--- 277
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++++++PI PSAEE N R SAKLRV +KI
Sbjct: 278 --------LKPKMELVSRKPILPSAEELEANNRSHSAKLRVARKI 314
>gi|433631285|ref|YP_007264913.1| Conserved protein of unknown function [Mycobacterium canettii CIPT
140070010]
gi|432162878|emb|CCK60270.1| Conserved protein of unknown function [Mycobacterium canettii CIPT
140070010]
Length = 344
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/282 (38%), Positives = 151/282 (53%), Gaps = 30/282 (10%)
Query: 116 HIPVMLGEVLDVFSSSRT-------ITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDP 168
H+PV+ ++ + + T +D T+GA GH+ + P L+L IG+D DP
Sbjct: 13 HVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRL-IGLDRDP 71
Query: 169 SALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG------VDAIL 222
+AL AR+ L FA + + + + SG VD IL
Sbjct: 72 TALDVARSRLVR--------------FADRLTLVHTRYDCLGAALAESGYAAVGSVDGIL 117
Query: 223 MDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEES 282
DLG+SSMQ++ ERGF+ D PLDMRMDP L A DI+N++ +A + +LR YGEE
Sbjct: 118 FDLGVSSMQLDRAERGFAYATDAPLDMRMDPTTPLTAADIVNTYNEAALADILRRYGEER 177
Query: 283 NWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDE 342
+ IV+ R++ ST ELV L+ P RR G A R FQALRIAVNDE
Sbjct: 178 FARRIAAGIVRQRVKTPFTSTAELVALLYQAIPAP-ARRAGG-HPAKRTFQALRIAVNDE 235
Query: 343 LKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSII 384
L++L ++ A D LA GGR+ V+++ SLEDRIVK+ F +
Sbjct: 236 LESLRKAVPAALDALAIGGRIAVLAYQSLEDRIVKRVFAEAV 277
>gi|320535363|ref|ZP_08035477.1| S-adenosyl-methyltransferase MraW [Treponema phagedenis F0421]
gi|320147765|gb|EFW39267.1| S-adenosyl-methyltransferase MraW [Treponema phagedenis F0421]
Length = 317
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 120/337 (35%), Positives = 165/337 (48%), Gaps = 31/337 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E L + + T FVD TLG GH+ A ++ +P+L IG+D DP+ AKA+
Sbjct: 5 HKSVLLQESLSLLKPASEDTLFVDGTLGEGGHTEAFLKTYPQLS-AIGIDADPTIQAKAK 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L + + F KN+ + + IL DLG+S
Sbjct: 64 LRLQPFASRVQYFSGWSDDFFKNY------------STEYPKPNIILFDLGISMFHYIES 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
RGFS + PLDMR++P SL A +I+N++ + E+ + YGEE + I R
Sbjct: 112 GRGFSFQAEEPLDMRINPATSLSAAEIINTYKEEELASIFYTYGEERFSRKIAGAICLRR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ G+L ++I P R G I ATR FQALRI VN EL L L F
Sbjct: 172 KEQEFKTAGDLAEVIFKAVPP--AYRHGRIHPATRSFQALRIKVNGELDRLPDLLKLAFQ 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
LA G+LGVISFHSLEDRIVK+ F + + R E I + R +
Sbjct: 230 RLALNGKLGVISFHSLEDRIVKRYFRDLAKNCRCPPEM-----------PICKCGGRPLA 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
Q +LT +P+ P+ EE R+N RSAKLR ++KI
Sbjct: 279 Q-----LLTGKPVIPTDEEIRVNPASRSAKLRAVKKI 310
>gi|297194883|ref|ZP_06912281.1| S-adenosylmethionine-dependent methyltransferase [Streptomyces
pristinaespiralis ATCC 25486]
gi|297152504|gb|EFH31797.1| S-adenosylmethionine-dependent methyltransferase [Streptomyces
pristinaespiralis ATCC 25486]
Length = 318
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/273 (38%), Positives = 153/273 (56%), Gaps = 22/273 (8%)
Query: 113 QSSHIPVMLGEVLDVFSSS-RTITSFV-DCTLGAAGHSSAIIRAHPELKLHIGVDVDPSA 170
Q+ H+PVML LD+ + + RT V DCTLG GHS A++ P+ +L + +D D A
Sbjct: 3 QTRHVPVMLQRCLDMLAPALRTPGGVVVDCTLGLGGHSEALLEQFPQTRL-VALDRDTEA 61
Query: 171 LAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG---VDAILMDLGM 227
L L G+ + F + + +V ++ + + R G V +L DLG+
Sbjct: 62 LR---------LSGE-----RLARFGERATLVHAVYDELPDVLDRLGIPRVQGVLFDLGV 107
Query: 228 SSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLL 287
SSMQ++ +RGF+ D PLDMRMD + A ++LN++P E+ R+LR YGEE +
Sbjct: 108 SSMQLDEADRGFAYAQDAPLDMRMDQTTGMSAAEVLNTYPPGELVRILRAYGEEKQAKRI 167
Query: 288 QNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLE 347
+ IV+ R + ++ LV+LI+ P R G A R FQALRI VN EL LE
Sbjct: 168 VSAIVREREKEPFTNSARLVELIRDALPQAAKRTGG--NPAKRTFQALRIEVNGELAVLE 225
Query: 348 SSLHACFDCLAPGGRLGVISFHSLEDRIVKQTF 380
++ A LA GGR+ V+S+HSLEDR+VKQ F
Sbjct: 226 RAVPAAVSALAVGGRIAVLSYHSLEDRLVKQVF 258
>gi|28493187|ref|NP_787348.1| S-adenosyl-methyltransferase MraW [Tropheryma whipplei str. Twist]
gi|28572698|ref|NP_789478.1| S-adenosyl-methyltransferase MraW [Tropheryma whipplei TW08/27]
gi|42559466|sp|Q83GN7.1|RSMH_TROWT RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|42559467|sp|Q83HJ6.1|RSMH_TROW8 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|28410830|emb|CAD67216.1| S-adenosyl-methyltransferase [Tropheryma whipplei TW08/27]
gi|28476228|gb|AAO44317.1| unknown [Tropheryma whipplei str. Twist]
Length = 317
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/269 (40%), Positives = 149/269 (55%), Gaps = 20/269 (7%)
Query: 116 HIPVMLGEVLDVFSSSRTITS-FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
H+PVMLGEV + I F+D TLGA GHS AI+ + L+ G+D D ALA A
Sbjct: 4 HLPVMLGEVCQLIEPVLGIGDVFIDATLGAGGHSEAILMSSQGALLY-GIDRDAYALALA 62
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
R L+ FA + + + D+ + L DLGMSSMQ++N
Sbjct: 63 RKRLSG--------------FADRCKFVHDTFDKFDKYLSNLHPKVFLFDLGMSSMQIDN 108
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
P+RGFS + GPLDMRM+ + A++ILN + + + R+ R+YG+E + +I +A
Sbjct: 109 PDRGFSYMKSGPLDMRMNESDKITAKEILNGYSETALIRIFRDYGQERYAKRIARQICKA 168
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R L +T ++ LI+ V P R+G A RVFQALRI VN EL L ++L
Sbjct: 169 RSVSELVTTCQVSQLIRDVCPPH--IRKGH--PAKRVFQALRIEVNSELLFLRTALEKAL 224
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSI 383
D L GGR+ V+S+HSLEDRIVK F S+
Sbjct: 225 DLLQVGGRIVVLSYHSLEDRIVKHLFRSV 253
>gi|153809802|ref|ZP_01962470.1| hypothetical protein RUMOBE_00183 [Ruminococcus obeum ATCC 29174]
gi|149833980|gb|EDM89060.1| S-adenosyl-methyltransferase MraW [Ruminococcus obeum ATCC 29174]
Length = 313
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 118/336 (35%), Positives = 176/336 (52%), Gaps = 30/336 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + ++VD TLG AGH+ + R IG+D D A+ A
Sbjct: 5 HKSVLLEETIDGLRV-KPDGTYVDGTLGGAGHAQEVCRRLSAKGRFIGIDQDQDAIVAAS 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L++ +G + N+ ++ + L +N+ VD I++DLG+SS Q++N
Sbjct: 64 ERLSA--YGD-----RVQIIRSNYCYMANEL----KNLGIQKVDGIVLDLGVSSYQLDNE 112
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGF+ D PLDMRMD + S A DI+N + + E+ R++R+YGE+ + IV AR
Sbjct: 113 ERGFTYRVDAPLDMRMDQRQSRTAADIVNGYDERELYRIIRDYGEDKFAKNIAKHIVAAR 172
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +TGEL ++I+ P M+ + G A R FQA+RI +N EL L SL D
Sbjct: 173 AKAPIQTTGELTEIIRQSIP-MKIQATGG-HPAKRTFQAIRIELNRELDVLRESLDGMID 230
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L GGR+ +I+FHSLEDRIVK F NE D +
Sbjct: 231 LLDDGGRICIITFHSLEDRIVKTIF-----------RKNENPCTCPPDFPVCVCG----- 274
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ GK++T++PI PS E N R +SAKLR+ ++
Sbjct: 275 KKSKGKVITRKPILPSETEMEENPRSKSAKLRIFER 310
>gi|309803099|ref|ZP_07697196.1| S-adenosyl-methyltransferase MraW [Lactobacillus iners LactinV
11V1-d]
gi|308164607|gb|EFO66857.1| S-adenosyl-methyltransferase MraW [Lactobacillus iners LactinV
11V1-d]
Length = 315
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/340 (36%), Positives = 174/340 (51%), Gaps = 32/340 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + + +VD T G GH+S +++ L IG D D A+ A+
Sbjct: 5 HYSVLLHETIDNLNL-KNDGVYVDATFGGGGHASYLLKQLSNGHL-IGFDQDEYAIELAK 62
Query: 176 AHLNSLLHGQAHPHLK-THTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+ +L + P L H N + + LG ID G+D I DLG+SS Q +
Sbjct: 63 KSFSEVLKANSKPKLSLVHDNFGNLQQNLAKLGFID------GIDGIYYDLGVSSPQFDQ 116
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
PERGFS + LDMRMD L A I+N+W E+ +L +YG+E + IV
Sbjct: 117 PERGFSYRFNARLDMRMDQTKDLDAYKIVNTWSQKELSNILFKYGDEKYARQIAKNIVAK 176
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +T ELVD+I+ P RR G A + FQA+RIAVNDEL+ LE SL
Sbjct: 177 RAIKPITTTFELVDIIKEAIPAF-ARRTGG-HPAKKSFQAIRIAVNDELEVLEKSLLDAI 234
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTF--LSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
+ L PGGR+ VI+F SLED+IVK+ F S +D R + D++ T
Sbjct: 235 EILKPGGRICVITFQSLEDKIVKKIFKKYSDVDIPRGMPQ---------IPDSLRPTL-- 283
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
KI++++PI + +E N R SAKLRV +K+
Sbjct: 284 --------KIISRKPIVATDKELEENNRSHSAKLRVAEKL 315
>gi|317129306|ref|YP_004095588.1| S-adenosyl-methyltransferase MraW [Bacillus cellulosilyticus DSM
2522]
gi|315474254|gb|ADU30857.1| S-adenosyl-methyltransferase MraW [Bacillus cellulosilyticus DSM
2522]
Length = 310
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 118/318 (37%), Positives = 164/318 (51%), Gaps = 35/318 (11%)
Query: 137 FVDCTLGAAGHS---SAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTH 193
+VDCTLG GHS ++++ A+ +L I D D AL+ A+ L H
Sbjct: 24 YVDCTLGGGGHSERIASMLGANGKL---ISFDQDEVALSHAKERLAPFRDKIIFVH---- 76
Query: 194 TFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDP 253
NF+++K L + S VD + DLG+SS Q + PERGFS D PLDMRMD
Sbjct: 77 ---SNFQYLKQELTHLG----YSSVDGFVFDLGVSSPQFDEPERGFSYRFDAPLDMRMDR 129
Query: 254 QASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSV 313
SL A +++N+WP ++ +V+ YGEE + KI +AR + +T ELVD+I+
Sbjct: 130 GQSLTAYEVVNNWPFEDIMKVISRYGEERFAKHIARKIEKAREVSPIKTTFELVDIIKDA 189
Query: 314 TPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLED 373
P R+ G A R FQA+RIAVNDEL E +L+ D GR+ VI+FHSLED
Sbjct: 190 IPAPARRKGG--HPAKRTFQAIRIAVNDELNVFEQALYDAIDMTTEKGRIAVITFHSLED 247
Query: 374 RIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAE 433
RI K F N+ + L I + + E ++ K+PI S E
Sbjct: 248 RICKHVF-----KNKSTPKDLPRGLPVIPESHKPELM-----------LVNKKPILASEE 291
Query: 434 EERLNCRCRSAKLRVIQK 451
E N R +SAKLR+ +K
Sbjct: 292 ELENNSRAQSAKLRIAEK 309
>gi|167765841|ref|ZP_02437894.1| hypothetical protein CLOSS21_00332 [Clostridium sp. SS2/1]
gi|429763567|ref|ZP_19295914.1| S-adenosyl-methyltransferase MraW [Anaerostipes hadrus DSM 3319]
gi|167712558|gb|EDS23137.1| S-adenosyl-methyltransferase MraW [Clostridium sp. SS2/1]
gi|291559197|emb|CBL37997.1| S-adenosyl-methyltransferase MraW [butyrate-producing bacterium
SSC/2]
gi|429178076|gb|EKY19360.1| S-adenosyl-methyltransferase MraW [Anaerostipes hadrus DSM 3319]
Length = 312
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 118/339 (34%), Positives = 175/339 (51%), Gaps = 30/339 (8%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
+ HI V+L E ++ + +VD TLG GH+ + + E +IG+D D A+A
Sbjct: 2 EFKHISVLLDETIEELHI-KPDGIYVDGTLGGGGHAYHVCQKLSEKGRYIGIDQDADAIA 60
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
+ L K N+ ++ VL ++ VD IL+DLG+SS Q+
Sbjct: 61 ASTKRLEPFKD-------KVTIVRDNYVNMPKVL----HDLGIEHVDGILLDLGVSSFQL 109
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ ERGF+ D PLDMRMD + SL A DI+N + + E+ ++R+YGEE + IV
Sbjct: 110 DEKERGFTYREDVPLDMRMDQRQSLTARDIVNEYSEMELFHIIRDYGEEKFAKNIAKHIV 169
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
R + +TG+L+++I+ P M+ R G A + FQA+RI N EL L+ S+ A
Sbjct: 170 NKRKESPIETTGQLIEVIKGAIP-MKVRAVGG-HPAKKTFQAIRIECNRELDVLKDSIDA 227
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
D L PGGRL +I+FHSLEDRIVK+ F E+ N+++
Sbjct: 228 MIDLLNPGGRLCIITFHSLEDRIVKRAF-----KKNENPCTCPPNFPVCVCGNVSK---- 278
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
GK LT++PI P EE N R +S+KLRV ++
Sbjct: 279 -------GKQLTRKPIIPGEEELEYNKRAKSSKLRVFER 310
>gi|158522805|ref|YP_001530675.1| S-adenosyl-methyltransferase MraW [Desulfococcus oleovorans Hxd3]
gi|263446302|sp|A8ZXX1.1|RSMH_DESOH RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|158511631|gb|ABW68598.1| S-adenosyl-methyltransferase MraW [Desulfococcus oleovorans Hxd3]
Length = 312
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/325 (34%), Positives = 166/325 (51%), Gaps = 50/325 (15%)
Query: 139 DCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKN 198
DCTLG GH+ I L IG+D DP+ALA A+ L+ + G+ +++ N
Sbjct: 27 DCTLGGGGHAVRIAEQILPEGLLIGIDKDPAALAHAKQALS--VFGERVLYVRG-----N 79
Query: 199 FRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLK 258
F +L +D VD +L+DLG+S Q++ RGFS D PLDMRMDP SL
Sbjct: 80 FADFSEILSSLDI----PAVDGVLLDLGLSFYQIDGSGRGFSFRKDEPLDMRMDPDQSLT 135
Query: 259 AEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMR 318
A D++N +A++ R+ RE+GEE + +IV+AR + ++G+L ++ P +
Sbjct: 136 AADLVNQSAEADLVRIFREFGEERYASRIARRIVEARRSAPVTTSGQLARIVTDAYPA-K 194
Query: 319 GRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQ 378
R I ATRVF ALRIAVN EL+ LE L D + PGGR+ V+SFHSLEDR+VK+
Sbjct: 195 ERHTAKIDPATRVFMALRIAVNTELENLERFLDTVIDRIKPGGRICVLSFHSLEDRMVKR 254
Query: 379 TFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII-----------QGWNGKILTKRP 427
+ W + + + +I+T++
Sbjct: 255 RM---------------------------KLWEKACVCPPGLPVCSCSKQRECRIVTRKA 287
Query: 428 ITPSAEEERLNCRCRSAKLRVIQKI 452
+ P+AEE + N RS +LR +K+
Sbjct: 288 LVPTAEEVQANPMARSVRLRAAEKV 312
>gi|160935714|ref|ZP_02083089.1| hypothetical protein CLOBOL_00604 [Clostridium bolteae ATCC
BAA-613]
gi|158441458|gb|EDP19168.1| hypothetical protein CLOBOL_00604 [Clostridium bolteae ATCC
BAA-613]
Length = 315
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/315 (36%), Positives = 166/315 (52%), Gaps = 30/315 (9%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
+VD TLG GH+ + + KL IG+D D A+ A L K
Sbjct: 28 YVDGTLGGGGHAYEVCKRLGSGKL-IGIDQDADAIEAAGKRLLPF-------QDKVTIVR 79
Query: 197 KNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQAS 256
N+ +IK VL +++ GVD I +DLG+SS Q++ RGF+ D PLDMRMD +
Sbjct: 80 SNYANIKEVLKELE----IEGVDGIYLDLGVSSYQLDTASRGFTYREDAPLDMRMDQRND 135
Query: 257 LKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPG 316
+ A I+N++ + E+ R++R+YGE++ + IV+AR + +TGEL ++I+ P
Sbjct: 136 VTAAHIINTYSEMELYRIIRDYGEDNFAKNIAKHIVRARGEHPIETTGELAEIIKGAIPA 195
Query: 317 MRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIV 376
R R G A R FQA+RI N EL+ LE S+ D L PGGRL +I+FHSLEDRIV
Sbjct: 196 -RVRATGG-HPAKRTFQAIRIECNHELEVLEQSIDTMIDLLNPGGRLSIITFHSLEDRIV 253
Query: 377 KQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEER 436
K F NE D + + GK+++++PI PS EE
Sbjct: 254 KSRF-----------RLNENPCICPHDFPVCVCGRKS-----KGKVVSRKPILPSEEELE 297
Query: 437 LNCRCRSAKLRVIQK 451
N R +SAKLRV ++
Sbjct: 298 ENSRSKSAKLRVFER 312
>gi|72161506|ref|YP_289163.1| methyltransferase [Thermobifida fusca YX]
gi|88909224|sp|Q47QX7.1|RSMH_THEFY RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|71915238|gb|AAZ55140.1| bacterial methyltransferase [Thermobifida fusca YX]
Length = 330
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/274 (39%), Positives = 152/274 (55%), Gaps = 22/274 (8%)
Query: 115 SHIPVMLGEVLDVFSSS--RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
+H+PVML V+++ + + + VD TLG GH+ A++RAHP L+L +GVD D +AL
Sbjct: 19 AHVPVMLERVVELLAPALQQPGAIAVDGTLGLGGHAEALLRAHPGLRL-VGVDRDTTALE 77
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVD---AILMDLGMSS 229
+AR L +A + +V I + G+D +L DLG+SS
Sbjct: 78 RARQRLAP--------------YADRIDLVHAVYSDIPRILDELGIDRVHGLLFDLGVSS 123
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
Q++ ERGF+ D PLDMRMD A DI+N++P +E+ R+ R YGEE +
Sbjct: 124 PQLDEAERGFAYSYDAPLDMRMDRTQERTAADIVNTYPASELTRIFRVYGEERFAARIAQ 183
Query: 290 KIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESS 349
IV+ R + + +TG L DL++S P RR G A R FQALRI VN EL LE +
Sbjct: 184 AIVRQRAKEPVRTTGVLADLVRSAIPAA-ARRSGG-HPAKRAFQALRIEVNSELSILERA 241
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSI 383
L A LA GR+ V+S+HSLEDRI K+ +
Sbjct: 242 LPAALSRLAVAGRIVVLSYHSLEDRITKRVLTEL 275
>gi|315222117|ref|ZP_07864026.1| S-adenosyl-methyltransferase MraW [Streptococcus anginosus F0211]
gi|315188743|gb|EFU22449.1| S-adenosyl-methyltransferase MraW [Streptococcus anginosus F0211]
Length = 316
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 120/339 (35%), Positives = 178/339 (52%), Gaps = 33/339 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 7 HVTVLLHETIDQLDI-KPNGVYVDATLGGAGHSEYLLSKLGENGRLYAFDQDQTAIEHAQ 65
Query: 176 AHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
L S + G TF NFRH+K+ L ++ +D I DLG+SS Q++
Sbjct: 66 KRLASYVEQGMV-------TFINDNFRHLKARLNELG----VEEIDGICYDLGVSSPQLD 114
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
ERGFS D PLDMRM+ +A L A +++N + ++ R+ +YGE+ + KI Q
Sbjct: 115 ERERGFSYKQDAPLDMRMNREAKLTAYEVVNQYSYHDLVRIFFKYGEDKFSKQIARKIEQ 174
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
R + + +T EL ++I+S P +++G A ++FQA+RI VNDEL + S+
Sbjct: 175 MREKKPIETTTELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADESIQQA 232
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
D LA GR+ VI+FHSLEDR+ KQ F E + E+ +I +
Sbjct: 233 MDLLAVDGRISVITFHSLEDRLTKQLF----------KEASTVEVPK------GLPFIPE 276
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+Q K++T++PI PS EE N R SAKLRV QK+
Sbjct: 277 DLQP-KMKLVTRKPILPSKEELDNNNRAHSAKLRVAQKV 314
>gi|289426145|ref|ZP_06427891.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes SK187]
gi|289153310|gb|EFD02025.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes SK187]
Length = 337
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 126/346 (36%), Positives = 175/346 (50%), Gaps = 46/346 (13%)
Query: 116 HIPVMLGEVLD----VFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
HIPVM +LD V S R + VD TLG GH+ A++R P+++L +G+D D AL
Sbjct: 14 HIPVMRARILDLLAVVLKSGRRV--HVDGTLGMGGHAEAVLRRFPDVEL-VGIDRDQQAL 70
Query: 172 AKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG---VDAILMDLGMS 228
A A L S FA + +V ++ E + G VD++L+DLG+S
Sbjct: 71 TMAEARLES--------------FADRVHLVHAVHDELPEVLDDLGLDYVDSVLLDLGLS 116
Query: 229 SMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQ 288
S Q++ ERGFS D PLDMRMD + A ILN + R+LREYGEE +
Sbjct: 117 SFQIDEVERGFSYSVDSPLDMRMDQSSGRTAAQILNESDPGALVRMLREYGEEKFADRIV 176
Query: 289 NKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLES 348
IV R R + ++G LV++I P RR+ A R FQALRIAVN E++TL +
Sbjct: 177 RAIVTERDRQPIETSGRLVEIITEAIPAT-VRRKRHSHPAKRTFQALRIAVNREMETLPA 235
Query: 349 SLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE 408
L D L GGR+ V+S+HSLEDR VK+ F DA +
Sbjct: 236 VLPRALDRLDVGGRIAVLSYHSLEDRPVKEAF--------RDACA-----------DTAP 276
Query: 409 TWIRQIIQGWNGKI--LTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ + + K +T+ P A+E N R SA+LRVI+++
Sbjct: 277 AGLPMVPESMAAKFNPVTRGAERPDADEVATNPRSASARLRVIERV 322
>gi|339629735|ref|YP_004721378.1| S-adenosylmethionine-dependent methyltransferase [Sulfobacillus
acidophilus TPY]
gi|379007150|ref|YP_005256601.1| ribosomal RNA small subunit methyltransferase H [Sulfobacillus
acidophilus DSM 10332]
gi|339287524|gb|AEJ41635.1| putative S-adenosylmethionine-dependent methyltransferase
[Sulfobacillus acidophilus TPY]
gi|361053412|gb|AEW04929.1| Ribosomal RNA small subunit methyltransferase H [Sulfobacillus
acidophilus DSM 10332]
Length = 293
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 127/337 (37%), Positives = 170/337 (50%), Gaps = 50/337 (14%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ VM EV++ + S ++D TLG AGHS ++ A ++L +G+D DP ALA A
Sbjct: 5 HVSVMPNEVMNYWVSDPQ-GLYLDVTLGGAGHSRRLLEAFSAVRL-VGIDQDPQALAAAA 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L H + NFR + +L DE L DLG+SS Q + P
Sbjct: 63 QVLAPYQH-------RVRLVRGNFREVARLLP--DEKF-----HGALFDLGVSSPQFDRP 108
Query: 236 ERGFSVL-GDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
+RGFS + PLDMRMDP + + A D++N+ +E+ L +YGEE + + IV A
Sbjct: 109 DRGFSYQHAEAPLDMRMDPDSPVTAMDLINTRSASEIKDALWQYGEERWAGRIADFIVAA 168
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R R + ++GELV++I++ P R G A R FQALRI VNDEL L + +
Sbjct: 169 RRRQPIRTSGELVEIIKAAIPAGARREGG--HPARRTFQALRIWVNDELGALVEGIKGAW 226
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
L PGGRL VISFHSLEDR+VK F RQ
Sbjct: 227 SLLVPGGRLVVISFHSLEDRLVKHQF-------------------------------RQW 255
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
G++LTK P+T + EE N R RSAKLR I K
Sbjct: 256 HHEQVGQVLTKHPVTATPEEVEANPRARSAKLRAITK 292
>gi|222053873|ref|YP_002536235.1| S-adenosyl-methyltransferase MraW [Geobacter daltonii FRC-32]
gi|263455960|sp|B9M164.1|RSMH_GEOSF RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|221563162|gb|ACM19134.1| S-adenosyl-methyltransferase MraW [Geobacter daltonii FRC-32]
Length = 312
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/340 (37%), Positives = 178/340 (52%), Gaps = 36/340 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+ EV+ + + R +VD TLG AGH+ I+ A L IG D D ALA A
Sbjct: 6 HVSVLPAEVI-AYLAPRPGGIYVDGTLGGAGHARLILEASAPDGLLIGFDQDGQALASAG 64
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L P K K NF ++ L +I +D L+D+G+SS Q++
Sbjct: 65 ERLA--------PFGKRVVLVKRNFAFLEEALAEIGIE----AIDGFLLDVGVSSHQLDT 112
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGFS D PLDMRMD A A +++N+ + ++ RV+REYGEE + I++
Sbjct: 113 VERGFSFQHDAPLDMRMDLSAETTAAELVNTLSEEDLCRVIREYGEERWAKRIAAFIIKR 172
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + +T +LVD+I++ P +G + + ATR FQALRIAVNDEL +LE L
Sbjct: 173 REETPIATTLQLVDVIKAAVP--KGAWEVRLHPATRTFQALRIAVNDELASLEKGLSGGV 230
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNINETWIR 412
L GGR VISFHSLEDRI K TF S+ A+G + E+ N+ +
Sbjct: 231 RLLKKGGRGVVISFHSLEDRIAKTTFRSL-------AQGCKCPREIPRCVCGNLPQV--- 280
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
K+LT +P+ + E N R RSA+LR ++KI
Sbjct: 281 --------KVLTGKPVVANEVEVSSNPRSRSARLRAVEKI 312
>gi|404423484|ref|ZP_11005128.1| 16S rRNA m(4)C1402 methyltransferase [Mycobacterium fortuitum
subsp. fortuitum DSM 46621]
gi|403654073|gb|EJZ09016.1| 16S rRNA m(4)C1402 methyltransferase [Mycobacterium fortuitum
subsp. fortuitum DSM 46621]
Length = 333
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/284 (39%), Positives = 155/284 (54%), Gaps = 29/284 (10%)
Query: 110 QQQQSSHIPVMLGEVLDVFSSSRTITS-------FVDCTLGAAGHSSAIIRAHPELKLHI 162
+ Q HIPV+L +++ + + T + VD TLGA GHS + P L++ I
Sbjct: 9 ESQDHGHIPVLLDRCVELLAPALTRRNADGTDAVLVDATLGAGGHSERFLTDFPGLQV-I 67
Query: 163 GVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKS----VLGQIDENILRSGV 218
G+D DP+AL A A L F R +++ + G I E R +
Sbjct: 68 GLDRDPNALGIASARLAP--------------FGDRIRFVRTRYDGIAGAIAEAGFRQ-I 112
Query: 219 DAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREY 278
D +L DLG+SSMQ++ ERGFS D PLDMRMDP L A DILN++ + R+LR++
Sbjct: 113 DGVLFDLGVSSMQLDQTERGFSYSADAPLDMRMDPDGPLTAADILNTYDAKSIARILRDF 172
Query: 279 GEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIA 338
GEE + +K+V+ R + +TGELV+L+ P RR G R FQALR+A
Sbjct: 173 GEERFAGRIADKVVKRRAQQPFSTTGELVELLYEAIPAP-ARRTGG-HPGKRTFQALRVA 230
Query: 339 VNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLS 382
VN EL +L +L A L GGR+ V+S+ SLEDRIVKQ F +
Sbjct: 231 VNGELDSLRGALPAALAALTEGGRIVVMSYQSLEDRIVKQAFAT 274
>gi|363897969|ref|ZP_09324506.1| ribosomal RNA small subunit methyltransferase H 2 [Oribacterium sp.
ACB7]
gi|361957614|gb|EHL10921.1| ribosomal RNA small subunit methyltransferase H 2 [Oribacterium sp.
ACB7]
Length = 312
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/338 (35%), Positives = 171/338 (50%), Gaps = 34/338 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H ++L E ++ S + +VD TLG GHS I + + IG+D D A+ A
Sbjct: 5 HKSILLNECMEGLSI-KADGIYVDGTLGGGGHSFHIAQRLSDKGRLIGIDQDEDAIEAAT 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L A + N+ H + +L + VD IL+DLG+SS Q +
Sbjct: 64 KRL-------AQFKQRVTIVRDNYEHFQEILSTLS----IPAVDGILLDLGVSSYQFDEA 112
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
+RGFS D PLDMRMD + A+D++NS+ +AE+ ++R+YGE+ + IV R
Sbjct: 113 DRGFSYRFDAPLDMRMDKRQDFTAKDLINSYSEAELYHIIRDYGEDKFAKNIAKHIVLER 172
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +T EL ++I P M+ R QG A + FQA+RIA+N EL+ LE SL
Sbjct: 173 AKKPIETTFELSEVISHAIP-MKMRVQGG-HPAKKTFQAIRIALNRELEVLEESLDGMIK 230
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L PGGRL +I+FHSLEDRIVK+ F R D I I
Sbjct: 231 ALKPGGRLCIITFHSLEDRIVKRAF------------------RTAEDPCICPKDFPICI 272
Query: 416 QGWN--GKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
G GK+++K+ I PS E N R +SAKLR+ ++
Sbjct: 273 CGRKSLGKVISKKAILPSDLEREENPRSKSAKLRIFER 310
>gi|313661472|ref|NP_001186351.1| putative S-adenosyl-L-methionine-dependent methyltransferase
METT5D1 [Gallus gallus]
Length = 409
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/357 (35%), Positives = 187/357 (52%), Gaps = 41/357 (11%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+PVM+ EV+ S ++ F+D T GA GHS+A++ + ++ +D DP+A A+
Sbjct: 74 HVPVMMEEVVSCLSP-QSGQCFLDMTFGAGGHSTALLEKASNITIY-ALDRDPTAYKIAQ 131
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDEN---ILRSGV-----DAILMDLGM 227
+++P + I+++LGQ ++ ++ SGV D +L+D G
Sbjct: 132 QL------SESYP-----------KQIQALLGQFSQSEALLISSGVEPGTLDGVLLDAGC 174
Query: 228 SSMQVNNPERGFSVLGDGPLDMRMD----PQASLKAEDILNSWPDAEVGRVLREYGEESN 283
SSMQ + PERGFS+ DGPLDMRMD P A D++N+ + +LR YGEE +
Sbjct: 175 SSMQFDTPERGFSLQKDGPLDMRMDSDRYPDMP-TAADVVNALDQQALASILRTYGEEKH 233
Query: 284 WHLLQNKIVQARLRGGLHSTGELVDLIQSVTPG--MRGRR---QGWIKTATRVFQALRIA 338
+ + IVQAR + T +L ++ P + R+ Q AT+ FQ LRI
Sbjct: 234 AKKIASAIVQARSIYPITRTQQLASIVAGAFPASALYARKDLLQRPTHIATKTFQGLRIF 293
Query: 339 VNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEEL 398
VNDEL L L L PGGRL +SFHSLEDRI+K+ FL ID + G+++++
Sbjct: 294 VNDELHELFIGLKTAEKFLKPGGRLVALSFHSLEDRIIKR-FLHGIDMTEKYNLGSKQKI 352
Query: 399 RNIRDDNINETWIRQIIQG-WNGK--ILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
R + E + G N K + K+ +TP A++ N R RSAKLR K+
Sbjct: 353 RQALKNCSKEEDTHEFPHGKSNSKWTFIQKKVLTPQAKDILTNPRARSAKLRAAVKL 409
>gi|116618594|ref|YP_818965.1| S-adenosyl-methyltransferase MraW [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|122271206|sp|Q03W30.1|RSMH_LEUMM RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|116097441|gb|ABJ62592.1| SAM-dependent methyltransferase for cell envelope biogenesis
[Leuconostoc mesenteroides subsp. mesenteroides ATCC
8293]
Length = 312
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/340 (36%), Positives = 178/340 (52%), Gaps = 37/340 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA-KA 174
H+ V+L E + + T +VD TLG GH+ I++ L+ D D +A+ A
Sbjct: 5 HVTVLLHEAIALLDIKPEGT-YVDATLGGGGHTGEILKQLTTGTLY-SFDQDDTAIQYNA 62
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+ + + G K KNFR + S L D + + VD I+ DLG+SS+Q ++
Sbjct: 63 EQYADEIAAG------KLVIIHKNFRTLTSALA--DYGV--TAVDGIVYDLGVSSVQFDD 112
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
+RGFS D LDMRMD + +L A+ I+N WP E+ RVL YGE+ + KI Q
Sbjct: 113 GQRGFSYKYDAELDMRMDQRQALTAKTIVNEWPFNELMRVLSRYGEDRFPKQIARKIEQH 172
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R +++T ELVD+I+ P R+ G A R FQA RIAVNDEL LE SL
Sbjct: 173 RENAPINTTFELVDIIKEAIPAPARRKGG--HPAKRSFQAFRIAVNDELGALEDSLTQAL 230
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
+ LA G++ VI+F SLEDR+VKQ F RE + E +
Sbjct: 231 ELLATDGKISVITFQSLEDRLVKQMF-------REKSSAPELPAG------------LPV 271
Query: 415 IQGW---NGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ G + ++LT++PI+PS EE +N R SAKLR I++
Sbjct: 272 LPGQFEADYELLTRKPISPSTEEMAINHRAESAKLRGIRR 311
>gi|42526707|ref|NP_971805.1| S-adenosyl-methyltransferase MraW [Treponema denticola ATCC 35405]
gi|449112225|ref|ZP_21748780.1| ribosomal RNA small subunit methyltransferase H [Treponema
denticola ATCC 33521]
gi|449112971|ref|ZP_21749486.1| ribosomal RNA small subunit methyltransferase H [Treponema
denticola ATCC 35404]
gi|85701364|sp|P62477.1|RSMH_TREDE RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|41817022|gb|AAS11716.1| S-adenosyl-methyltransferase MraW [Treponema denticola ATCC 35405]
gi|448956506|gb|EMB37267.1| ribosomal RNA small subunit methyltransferase H [Treponema
denticola ATCC 33521]
gi|448960551|gb|EMB41260.1| ribosomal RNA small subunit methyltransferase H [Treponema
denticola ATCC 35404]
Length = 315
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/345 (36%), Positives = 169/345 (48%), Gaps = 41/345 (11%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
Q H V+L E L+ + FVD TLG GH+ A ++ +P+L IGVD D S
Sbjct: 2 QPVHTSVLLEECLEFLKPDASDNLFVDGTLGEGGHTEAFLKRYPQLNA-IGVDADVSIQE 60
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVD-----AILMDLGM 227
+A+ L G+ I+ LG DE D IL+DLG+
Sbjct: 61 RAKERLKPF--GE---------------RIRFHLGWSDEFFKNYPKDFAPPNLILLDLGI 103
Query: 228 SSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLL 287
S RGFS D PLDMR++P+ L A DI+NS+ + ++ ++ YGEE +
Sbjct: 104 SMFHYVKSGRGFSFSSDEPLDMRLNPELRLSAADIVNSYNEKDLADLIFNYGEERYSRKI 163
Query: 288 QNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLE 347
++IV+ R + EL D I P + R G I AT+ FQALRIAVN EL L
Sbjct: 164 ASRIVEQRAAAAFSNAKELADCIYKAVP--QNYRHGKIHPATKTFQALRIAVNGELDRLP 221
Query: 348 SSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNIN 407
L A F LAP GRLG+I+FHSLEDRIVK F + + + I
Sbjct: 222 RLLEAAFSVLAPNGRLGLITFHSLEDRIVKFYFKEL-----------GKSCTCPENMPIC 270
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ R ++LTK+ + S EE RLN RSA+LRV++KI
Sbjct: 271 KCGGRP-----RAEVLTKKAVKASDEEIRLNPPSRSARLRVVRKI 310
>gi|322387149|ref|ZP_08060759.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Streptococcus infantis ATCC 700779]
gi|419843740|ref|ZP_14367047.1| S-adenosyl-methyltransferase MraW [Streptococcus infantis ATCC
700779]
gi|321141678|gb|EFX37173.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Streptococcus infantis ATCC 700779]
gi|385702532|gb|EIG39675.1| S-adenosyl-methyltransferase MraW [Streptococcus infantis ATCC
700779]
Length = 316
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 120/340 (35%), Positives = 180/340 (52%), Gaps = 35/340 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ VML E +D+ + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 7 HVTVMLHETIDMLDV-KPDGIYVDATLGGAGHSEYLLSKLSEKGHLYAFDQDQNAIDNAQ 65
Query: 176 AHLNSLLHGQAHPHLKTH--TFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
L P+++ TF K NFRH+K L ++ + +D I DLG+SS Q+
Sbjct: 66 KRLA--------PYIEKGMVTFIKDNFRHLKDRL----HDLGVTEIDGICYDLGVSSPQL 113
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ ERGFS + PLDMRM+ +ASL A +++N + ++ R+ +YGE+ + KI
Sbjct: 114 DQRERGFSYKKNAPLDMRMNQEASLTAYEVVNHYDYHDLVRIFFKYGEDKFSKQIARKIE 173
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
QAR + + +T EL ++I+S P +++G A ++FQA+RI VNDEL + S+
Sbjct: 174 QAREQKPIETTTELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADESIQQ 231
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
D LA GR+ VI+FHSLEDR+ KQ F + + L I DD
Sbjct: 232 AMDMLALDGRISVITFHSLEDRLTKQLFKEV------STVKVPKGLPFIPDD-------- 277
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++++++PI PS EE N R SAKLRV +KI
Sbjct: 278 ---LKPKMELVSRKPILPSKEELEANNRSHSAKLRVARKI 314
>gi|206889537|ref|YP_002249141.1| S-adenosyl-methyltransferase MraW [Thermodesulfovibrio yellowstonii
DSM 11347]
gi|262825898|sp|B5YFU3.1|RSMH_THEYD RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|206741475|gb|ACI20532.1| S-adenosyl-methyltransferase MraW [Thermodesulfovibrio yellowstonii
DSM 11347]
Length = 292
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/350 (35%), Positives = 184/350 (52%), Gaps = 60/350 (17%)
Query: 104 DYESIIQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAII-RAHPELKLHI 162
DY+ I HIPVM+ EV+ + + I +VD TLG GHS AI+ R P+ +L I
Sbjct: 2 DYKKI-------HIPVMVKEVIQLLNPYGGI--YVDATLGCGGHSLAILKRLSPDGRL-I 51
Query: 163 GVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAIL 222
G+D D SA+ A L+ + L+ +F+ H+K VL ++ NI +D I+
Sbjct: 52 GIDRDESAIFYANRILDD-----SRVILRKASFS----HLKEVLSEL--NI--EKIDGII 98
Query: 223 MDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEES 282
DLG+S +Q+ + ERGFS + LDMRMD L A D++N +P+ ++ ++ R+YG+E
Sbjct: 99 FDLGVSMLQLKDFERGFSFHSEERLDMRMDQTEPLTAWDVVNKYPEQKLTQIFRDYGDEP 158
Query: 283 NWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDE 342
+ +I++ R + + + EL DL++ P R G + AT++FQA+RI VN E
Sbjct: 159 FARRIAREIIRQRGKKTIDTCKELADLVKKTVP-----RHGRLHPATQIFQAIRIEVNRE 213
Query: 343 LKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIR 402
+ L L + L GGR+ VIS+HS EDR+VK F EEE
Sbjct: 214 FEELRQGLLQAVELLNSGGRICVISYHSGEDRVVKNFF-------------REEE----- 255
Query: 403 DDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
Q N +ILTK+P+ PS EE N RSA+LR +KI
Sbjct: 256 -------------QKGNLRILTKKPLLPSLEEVAKNPSARSARLRGGEKI 292
>gi|308380285|ref|ZP_07669154.1| hypothetical protein TMKG_00427 [Mycobacterium tuberculosis
SUMu011]
gi|308361967|gb|EFP50818.1| hypothetical protein TMKG_00427 [Mycobacterium tuberculosis
SUMu011]
Length = 425
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/282 (38%), Positives = 151/282 (53%), Gaps = 30/282 (10%)
Query: 116 HIPVMLGEVLDVFSSSRT-------ITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDP 168
H+PV+ ++ + + T +D T+GA GH+ + P L+L IG+D DP
Sbjct: 94 HVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRL-IGLDRDP 152
Query: 169 SALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG------VDAIL 222
+AL AR+ L FA + + + + SG VD IL
Sbjct: 153 TALDVARSRLVR--------------FADRLTLVHTRYDCLGAALAESGYAAVGSVDGIL 198
Query: 223 MDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEES 282
DLG+SSMQ++ ERGF+ D PLDMRMDP L A DI+N++ +A + +LR YGEE
Sbjct: 199 FDLGVSSMQLDRAERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEER 258
Query: 283 NWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDE 342
+ IV+ R + ST ELV L+ P RR G A R FQALRIAVNDE
Sbjct: 259 FARRIAAGIVRRRAKTPFTSTAELVALLYQAIPAP-ARRVGG-HPAKRTFQALRIAVNDE 316
Query: 343 LKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSII 384
L++L +++ A D LA GGR+ V+++ SLEDRIVK+ F +
Sbjct: 317 LESLRTAVPAALDALAIGGRIAVLAYQSLEDRIVKRVFAEAV 358
>gi|15900265|ref|NP_344869.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae TIGR4]
gi|111657194|ref|ZP_01407969.1| hypothetical protein SpneT_02001591 [Streptococcus pneumoniae
TIGR4]
gi|421242166|ref|ZP_15698694.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
2081074]
gi|421246584|ref|ZP_15703074.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
2082170]
gi|262827209|sp|P0CB58.1|RSMH_STRPN RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|14971807|gb|AAK74509.1| yllC protein [Streptococcus pneumoniae TIGR4]
gi|395611738|gb|EJG71802.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
2081074]
gi|395616194|gb|EJG76207.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
2082170]
Length = 316
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 185/345 (53%), Gaps = 45/345 (13%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 7 HVTVLLHETIDMLDV-KPDGIYVDATLGGAGHSEYLLSKLSEKGHLYAFDQDQNAIDNAQ 65
Query: 176 AHLNSLLHGQAHPHLKTH--TFAK-NFRHIKSVLGQIDENILRSGV---DAILMDLGMSS 229
L P+++ TF K NFRH+++ L + +GV D I DLG+SS
Sbjct: 66 KRLA--------PYIEKGMVTFIKDNFRHLQACLRE-------AGVQEIDGICYDLGVSS 110
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
Q++ ERGFS D PLDMRM+ ASL A +++N++ ++ R+ +YGE+ +
Sbjct: 111 PQLDQRERGFSYKKDAPLDMRMNQDASLTAYEVVNNYDYHDLVRIFFKYGEDKFSKQIAR 170
Query: 290 KIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESS 349
KI QAR + +T EL ++I+ V P +++G A ++FQA+RI VNDEL + S
Sbjct: 171 KIEQAREVKPIETTTELAEIIKLVKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADES 228
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNIN 407
+ D LA GR+ VI+FHSLEDR+ KQ F ++A E + L I DD
Sbjct: 229 IQQAMDMLALDGRISVITFHSLEDRLTKQLF--------KEASTVEVPKGLPFIPDD--- 277
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++++++PI PSAEE N R SAKLRV++KI
Sbjct: 278 --------LKPKMELVSRKPILPSAEELEANNRSHSAKLRVVRKI 314
>gi|167751501|ref|ZP_02423628.1| hypothetical protein EUBSIR_02502 [Eubacterium siraeum DSM 15702]
gi|167655309|gb|EDR99438.1| S-adenosyl-methyltransferase MraW [Eubacterium siraeum DSM 15702]
Length = 308
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/344 (35%), Positives = 181/344 (52%), Gaps = 41/344 (11%)
Query: 112 QQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
++ HIPV+L E ++ + +VDCT G AGHSS I + +L IG D DP A+
Sbjct: 3 EKPIHIPVLLSETIESLDI-KPDGIYVDCTTGFAGHSSEIAKRLTTGRL-IGFDRDPDAV 60
Query: 172 AKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGV---DAILMDLGMS 228
A L +PH I DE++ GV D +LMDLG+S
Sbjct: 61 KAAEEKLKD------YPHT----------LINRKFSTFDESLDEIGVGKVDGVLMDLGVS 104
Query: 229 SMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQ 288
S Q++ ERGFS D PLDMRM ++ L A D++N + ++ ++L EYGEE H +
Sbjct: 105 SYQLDTAERGFSYHEDAPLDMRMS-KSGLSAYDVVNEYSKEQLEKILFEYGEEKFAHGIV 163
Query: 289 NKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLES 348
+ I++AR + +T EL ++++ P ++ R++ + FQA+RI VN EL L+
Sbjct: 164 SGILKARETAPIKTTLELAEIVKRNVP-LKVRKEK--NPCKKTFQAIRIEVNGELDELKK 220
Query: 349 SLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE 408
+ F+ L+ GGRL +I+FHS+EDRIVK TF RE G +
Sbjct: 221 GMSEAFERLSQGGRLAIITFHSIEDRIVKNTF-------REYCTGC---------TCPPD 264
Query: 409 TWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ + G+ + ++P+T S EE +N R RSAKLRVI+K+
Sbjct: 265 FPVCVCGKKPRGRTVYRKPVTASEEELAVNNRSRSAKLRVIEKL 308
>gi|296217807|ref|XP_002755199.1| PREDICTED: probable methyltransferase-like protein 15 [Callithrix
jacchus]
Length = 406
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/377 (33%), Positives = 200/377 (53%), Gaps = 40/377 (10%)
Query: 93 EKRRTRSNKDYDYESIIQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAII 152
+ + + ++D ++E++++ HIPVM+ EV+ S + F+D T G+ GH+ AI+
Sbjct: 53 QAQESHRSQDRNFETMVK----LHIPVMVDEVVHCLSPQKG-QIFLDMTFGSGGHTKAIL 107
Query: 153 RAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDEN 212
+ ++ L+ +D DP+A A A HL+ L + K R + Q +
Sbjct: 108 QKESDIVLY-ALDRDPTAYALAE-HLSEL-------------YPKQIRAMLGRFSQAETL 152
Query: 213 ILRSGV-----DAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMD----PQASLKAEDIL 263
++++ V D +LMDLG SSMQ++ ERGFS+ DGPLDMRMD P A D++
Sbjct: 153 LMKAEVQPGTFDGVLMDLGCSSMQLDTSERGFSLRKDGPLDMRMDGDRYPDMP-TAADVV 211
Query: 264 NSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTP--GMRGRR 321
N+ + +LR YGEE + + + IVQAR + T +L +I P + R+
Sbjct: 212 NALDQQALASILRAYGEEKHAKKIASAIVQARSIYPITRTQQLASIIAGAFPPSAIYARK 271
Query: 322 ---QGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQ 378
Q AT+ FQALRI VN+EL L + L L PGGRL +SFHSLEDRIVK+
Sbjct: 272 DLLQRSTHIATKTFQALRIFVNNELNELHTGLKTAQKFLRPGGRLVALSFHSLEDRIVKR 331
Query: 379 TFLSIIDHNREDAEGNEEELRNIRDDNIN---ETWIRQIIQGWNGKILTKRPITPSAEEE 435
L I R + ++ ++ R D+ + E +R+ W +++ K+ ++P + +
Sbjct: 332 FLLGISMTERFNLSVRQQVMKASRLDSDHENVEVSMRRAPLMW--ELIHKKVLSPQSRDV 389
Query: 436 RLNCRCRSAKLRVIQKI 452
+ N R RSAKLR K+
Sbjct: 390 QDNPRGRSAKLRAAIKL 406
>gi|149198205|ref|ZP_01875252.1| putative S-adenosylmethionine-dependent methyltransferase
[Lentisphaera araneosa HTCC2155]
gi|149138807|gb|EDM27213.1| putative S-adenosylmethionine-dependent methyltransferase
[Lentisphaera araneosa HTCC2155]
Length = 311
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/342 (36%), Positives = 173/342 (50%), Gaps = 41/342 (11%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HIPV+ +V+D F+DCTLG GHSS I+ + P++KL +G+D D +AL A
Sbjct: 6 HIPVLAEQVIDGLRPQNG-GKFIDCTLGGGGHSSMILSSGPDVKL-LGLDCDDNALRAAS 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L+S K+ NFR L ++ ++ + VD ILMD+G+SS ++
Sbjct: 64 ERLSSF-----GDRFKSKRL--NFRD----LAKLKDDAEWNQVDGILMDIGVSSHHLDEA 112
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
RGF+ +GPLDMRMD + + A ILN + ++ R+YGE + L +V R
Sbjct: 113 SRGFTYRENGPLDMRMDRRLKVTASMILNKESLEGLTKIFRDYGEMKEAYRLAKAVVADR 172
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ T +L L V R++ T FQALRIAVNDEL LES + A FD
Sbjct: 173 EKELFTHTEQLAGLADRVCVNRNRRKRN--PAPTLAFQALRIAVNDELGALESGMKAAFD 230
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L PGGRL VISFHSLEDR+VK+ F +D + T +
Sbjct: 231 LLKPGGRLAVISFHSLEDRMVKEFF---------------------KDKATSCTCPPDLP 269
Query: 416 QGWNG-----KILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
G KI+T++P+T + E N R AKLRV +KI
Sbjct: 270 ICVCGSKAQMKIITRKPLTAESGELAENTRAACAKLRVAEKI 311
>gi|310828121|ref|YP_003960478.1| hypothetical protein [Eubacterium limosum KIST612]
gi|308739855|gb|ADO37515.1| hypothetical protein ELI_2533 [Eubacterium limosum KIST612]
Length = 311
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/345 (35%), Positives = 173/345 (50%), Gaps = 40/345 (11%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
+ SH V+L E +D R ++VD TLG GHS I + IG+D D AL
Sbjct: 2 EFSHTTVLLHETVDGLMI-RPDGTYVDGTLGGGGHSELICKRLSADGTLIGIDQDDFALD 60
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
A L A + NF H+K VLG+ S +D I+ DLG+SS Q
Sbjct: 61 YAGRRL-------APYACRKQLVKNNFVHLKEVLGEAG----VSQIDGIIYDLGVSSFQF 109
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
++ RGFS DGPLDMRMD A L A +++N++P + +VL+ YGEE + N I+
Sbjct: 110 DDETRGFSYHHDGPLDMRMDSGAELSAYEVVNAYPPERLKKVLQVYGEERFAGRIVNAII 169
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
+ R + +T EL +LI++ P ++ A + FQA+R+ VN EL LE + A
Sbjct: 170 KERETKPIETTLELSELIKAAYPAKERFKEKH--PARKSFQAIRLEVNHELDILEDAFSA 227
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
+ L PGGR+ +I+FHSLEDRIVK F +D T
Sbjct: 228 GIEALKPGGRMCIITFHSLEDRIVKHFF---------------------KDKQNPCTCPP 266
Query: 413 QIIQGWNGK-----ILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ GK I+T++P+ P+ EE N R RSAKLR+ +K+
Sbjct: 267 EFPACVCGKKPEVRIITRKPVLPAPEEIEANRRSRSAKLRIAEKL 311
>gi|325679058|ref|ZP_08158652.1| S-adenosyl-methyltransferase MraW [Ruminococcus albus 8]
gi|324109182|gb|EGC03404.1| S-adenosyl-methyltransferase MraW [Ruminococcus albus 8]
Length = 319
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/339 (36%), Positives = 173/339 (51%), Gaps = 39/339 (11%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+PV+L E ++ + + D T G AGHS I + +L I VD DP A+A A
Sbjct: 5 HVPVLLEECIEGLDI-KPDGIYCDGTAGGAGHSKEIAKRLTTGRL-ISVDRDPEAVAVAT 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L L A R S L +I E + SG D ILMDLG+SS Q++N
Sbjct: 63 ERLAGLP-------------ATVVRGNYSELDEIFERLGLSGADGILMDLGVSSYQLDNA 109
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRM + L A D++N + + + R++ EYGEE + +IV+AR
Sbjct: 110 ERGFSYHADAPLDMRMSSEG-LSARDVVNGYDEKTLARIIFEYGEEKYSRSIARRIVEAR 168
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +T EL ++I++ P R + K + FQA+RI VN EL+ L +L FD
Sbjct: 169 QVRPIETTLELAEIIKTGVPQKVRREKNPCK---KTFQAIRIEVNAELEHLSVALDKAFD 225
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L GGRL +I+FHSLEDR+VKQ F R + +
Sbjct: 226 LLNVGGRLCIITFHSLEDRLVKQRF------------------RGFCQGCVCPPDFPVCV 267
Query: 416 QGWN--GKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
G G+++T++PI P+ E N R SAKLR+I+KI
Sbjct: 268 CGRTPRGRLVTRKPIEPTERENTENKRAHSAKLRIIEKI 306
>gi|355576371|ref|ZP_09045666.1| methylase MraW [Olsenella sp. oral taxon 809 str. F0356]
gi|354816907|gb|EHF01421.1| methylase MraW [Olsenella sp. oral taxon 809 str. F0356]
Length = 318
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/346 (35%), Positives = 181/346 (52%), Gaps = 39/346 (11%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
+ H+PVML EV+ + DCTLG AGHS + R L IG+D D ALA
Sbjct: 4 EYRHVPVMLEEVIRELDP-KPGEVVCDCTLGGAGHSVELARLVQPDGLSIGIDQDDMALA 62
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRS---GVDAILMDLGMSS 229
A + G + R +K GQ+DE ++ + GVD L D+G+SS
Sbjct: 63 AATERFEREVPG------------ADRRFLKGNFGQLDELLVEAEVPGVDCFLFDIGVSS 110
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLK-AEDILNSWPDAEVGRVLREYGEESNWHLLQ 288
Q++ PERGFS D PLDMRMDP + + A +++N++ +A++ RVLR YG+E +
Sbjct: 111 PQLDIPERGFSYHEDAPLDMRMDPGNNTQTAAEVINNYTEADLARVLRVYGDERFAARIA 170
Query: 289 NKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLES 348
++V+ R + + +T +LV+++++ P GRR G A + FQALRI VN EL L+
Sbjct: 171 RQVVRTREKAPILTTLQLVEVVKAAIPAA-GRRHGG-HPARKTFQALRIEVNHELDVLDQ 228
Query: 349 SLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEG--NEEELRNIRDDNI 406
L A PGGR+ VIS+HSLEDR+VK F + ++G EL D++
Sbjct: 229 GLRAAVRWANPGGRICVISYHSLEDRVVKHAFAEL-------SQGCTCPPELPVCVCDHV 281
Query: 407 NETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+R T++P+ S E N R RSA +RV K+
Sbjct: 282 PILEVR-----------TRKPLVASDGEIERNPRSRSALMRVAVKL 316
>gi|357638664|ref|ZP_09136537.1| S-adenosyl-methyltransferase MraW [Streptococcus urinalis 2285-97]
gi|418417362|ref|ZP_12990558.1| ribosomal RNA small subunit methyltransferase H [Streptococcus
urinalis FB127-CNA-2]
gi|357587118|gb|EHJ56526.1| S-adenosyl-methyltransferase MraW [Streptococcus urinalis 2285-97]
gi|410871838|gb|EKS19784.1| ribosomal RNA small subunit methyltransferase H [Streptococcus
urinalis FB127-CNA-2]
Length = 316
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/337 (35%), Positives = 176/337 (52%), Gaps = 29/337 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG AGHSS ++ + D D A+ A+
Sbjct: 7 HVTVLLNETVDMLDI-KPNGVYVDATLGGAGHSSYLLSKLGKDGHLYCFDQDQKAIDNAK 65
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L + +K NFRH+KS L E + +D IL DLG+SS Q++
Sbjct: 66 LKLKKYIDNNQVTFIKD-----NFRHLKSNL----EAYGVTEIDGILYDLGVSSPQLDER 116
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRM+ + S A ++N + E+ ++ +YGE+ + KI +AR
Sbjct: 117 ERGFSYKQDAPLDMRMNQEQSFSAYHVVNDYSYHELVKIFYKYGEDKFSKQIARKIEKAR 176
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +T EL ++I+S P +++G A ++FQA+RI VNDEL + SL +
Sbjct: 177 SQKPIETTTELSEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADQSLQEAIE 234
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
LA GR+ VI+FHSLEDR+ KQ F E +G L I DD +
Sbjct: 235 LLAVDGRISVITFHSLEDRLTKQLFKET--STVEVPKG----LPFIPDD----------L 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
Q ++ K+PI PS EE +N R SAKLRV +KI
Sbjct: 279 QPKLA-LVNKKPILPSQEELEINNRAHSAKLRVAKKI 314
>gi|381336968|ref|YP_005174743.1| 16S rRNA m(4)C1402 methyltransferase [Leuconostoc mesenteroides
subsp. mesenteroides J18]
gi|356644934|gb|AET30777.1| 16S rRNA m(4)C1402 methyltransferase [Leuconostoc mesenteroides
subsp. mesenteroides J18]
Length = 312
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/340 (36%), Positives = 178/340 (52%), Gaps = 37/340 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA-KA 174
H+ V+L E + + T +VD TLG GH+ I++ L+ D D +A+ A
Sbjct: 5 HVTVLLHEAIALLDIKPEGT-YVDATLGGGGHTGEILKQLTTGTLY-SFDQDDTAIQYNA 62
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+ + + G K KNFR + S L D + + VD I+ DLG+SS+Q ++
Sbjct: 63 EQYADEIAAG------KLVIIHKNFRTLTSALA--DYGV--TSVDGIVYDLGVSSVQFDD 112
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
+RGFS D LDMRMD + +L A+ I+N WP E+ RVL YGE+ + KI Q
Sbjct: 113 GQRGFSYKYDAELDMRMDQRQALTAKTIVNEWPFNELMRVLSRYGEDRFPKQIARKIEQH 172
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R +++T ELVD+I+ P R+ G A R FQA RIAVNDEL LE SL
Sbjct: 173 RENAPINTTFELVDIIKEAIPAPARRKGG--HPAKRSFQAFRIAVNDELGALEDSLTQAL 230
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
+ LA G++ VI+F SLEDR+VKQ F RE + E +
Sbjct: 231 ELLATDGKISVITFQSLEDRLVKQMF-------REKSSAPELPAG------------LPV 271
Query: 415 IQGW---NGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ G + ++LT++PI+PS EE +N R SAKLR I++
Sbjct: 272 LPGQFEADYELLTRKPISPSTEEMAINHRAESAKLRGIRR 311
>gi|218281029|ref|ZP_03487608.1| hypothetical protein EUBIFOR_00167 [Eubacterium biforme DSM 3989]
gi|218217710|gb|EEC91248.1| hypothetical protein EUBIFOR_00167 [Eubacterium biforme DSM 3989]
Length = 308
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/340 (34%), Positives = 174/340 (51%), Gaps = 38/340 (11%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
HI V+L E +D+ +VDCTLG GHSS I++ L+ D D +A+
Sbjct: 2 EHISVLLNESIDMLQIKED-GIYVDCTLGRGGHSSEILKRLTSGHLY-AFDCDQNAI--- 56
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGV---DAILMDLGMSSMQ 231
++ P LK F I S + + + GV D I MDLG+SS Q
Sbjct: 57 ---------DESMPRLKA--IGDQFTLIHSPFENLKSELAKRGVNFVDGIFMDLGVSSPQ 105
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ +RGFS D LDMRMD L A ++N++ ++ R+L+ YGEE + +KI
Sbjct: 106 FDDAQRGFSYRWDARLDMRMDQSQELDAYVVVNTYDKEDLIRILKRYGEEPFAQKIADKI 165
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
+AR + +T ELVD+I+S P R++G A + FQA+RI VN EL+ LE+ LH
Sbjct: 166 CKAREIAPIETTFELVDVIKSALPAAVLRKKGH--PAKQTFQAIRIEVNHELEQLETVLH 223
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
L P GR+ VI+FHSLEDRIVK+ F + + +N+
Sbjct: 224 DGLTMLNPHGRMAVITFHSLEDRIVKEIFKEVAVAKK-----------------VNKRLP 266
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ + +++ ++P+ S+EE +N R SAKLR I+K
Sbjct: 267 QVGTENLEYQLVNRKPVLASSEELEMNNRAHSAKLRGIEK 306
>gi|386714167|ref|YP_006180490.1| S-adenosyl-methyltransferase [Halobacillus halophilus DSM 2266]
gi|384073723|emb|CCG45216.1| S-adenosyl-methyltransferase [Halobacillus halophilus DSM 2266]
Length = 326
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/317 (38%), Positives = 166/317 (52%), Gaps = 29/317 (9%)
Query: 136 SFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTF 195
++VDCTLG GHS I E I D D +AL AR L+ H
Sbjct: 23 TYVDCTLGGGGHSEVIASMLSEKGRLISFDQDEAALEAARERLDEYSDRVIFVH------ 76
Query: 196 AKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQA 255
NFR ++S L ++ + VD IL DLG+SS Q++ ERGFS D PLDMRM+
Sbjct: 77 -ANFRELESELEELG----YTEVDGILYDLGVSSPQLDVEERGFSYHQDAPLDMRMNQSN 131
Query: 256 SLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTP 315
L A++++N WP + R+ +YGEE + KI AR + +TGELV+LI+ P
Sbjct: 132 ELSAKEVVNEWPYERLVRIFFKYGEEKFSKQIARKIEAARAEKMIETTGELVELIKEGIP 191
Query: 316 GMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRI 375
R+ G A R+FQA+RIAVNDEL + SLH A GR+ VI+FHSLEDR+
Sbjct: 192 APARRKGG--HPAKRIFQAIRIAVNDELGAFQDSLHQAARVCAVNGRIAVITFHSLEDRL 249
Query: 376 VKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEE 435
KQ F + N +NI I + Q +++T++PI +EE
Sbjct: 250 CKQAF--------KKWSSNPPLPKNI-------PVIPEDKQP-PFEMVTRKPIVAESEEL 293
Query: 436 RLNCRCRSAKLRVIQKI 452
N R RSAKLRV++KI
Sbjct: 294 EENRRSRSAKLRVVEKI 310
>gi|109914373|sp|Q5XAL3.2|RSMH_STRP6 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
Length = 316
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/341 (34%), Positives = 185/341 (54%), Gaps = 37/341 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG +GHS+ ++ E D D A+ A+
Sbjct: 7 HVTVLLHETVDMLDI-KPDGIYVDATLGGSGHSAYLLSKLGEEGHLYCFDQDQKAIDNAQ 65
Query: 176 AHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQ--IDENILRSGVDAILMDLGMSSMQ 231
L S + GQ TF K NFRH+K+ L +DE +D IL DLG+SS Q
Sbjct: 66 VTLKSYIDKGQV-------TFIKDNFRHLKARLTALGVDE------IDGILYDLGVSSPQ 112
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ ERGFS D PLDMRMD Q+ L A +++N++P ++ ++ +YGE+ + KI
Sbjct: 113 LDERERGFSYKQDAPLDMRMDRQSLLTAYEVVNTYPFNDLVKIFFKYGEDKFSKQIARKI 172
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
QAR + +T EL +LI++ P +++G A ++FQA+RI VNDEL + S+
Sbjct: 173 EQARAIKPIETTTELAELIKAAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADESIQ 230
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
+ LA GR+ VI+FHSLEDR+ KQ F +E + + + + +++ +
Sbjct: 231 EAMELLALDGRISVITFHSLEDRLTKQLF-------KEASTVDVPKGLPLIPEDMKPKF- 282
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++++++PI PS E N R SAKLRV +KI
Sbjct: 283 ---------ELVSRKPILPSHSELAANKRAHSAKLRVAKKI 314
>gi|403715986|ref|ZP_10941624.1| ribosomal RNA small subunit methyltransferase H [Kineosphaera
limosa NBRC 100340]
gi|403210289|dbj|GAB96307.1| ribosomal RNA small subunit methyltransferase H [Kineosphaera
limosa NBRC 100340]
Length = 377
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 128/361 (35%), Positives = 186/361 (51%), Gaps = 59/361 (16%)
Query: 116 HIPVMLGEVLDVFS--------------------SSRTITSFVDCTLGAAGHSSAIIRAH 155
H+PVML +++V S SS +VD TLG GH+ AI+ A
Sbjct: 10 HVPVMLERIVEVLSPALAPGGPQPEGAPTDSTDESSGHTPVYVDGTLGMGGHTEAILSAC 69
Query: 156 PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSV---LGQIDEN 212
P+ + +G+D DP AL A A L F FR +++V +G + +
Sbjct: 70 PQ-AIAVGIDRDPQALRFASARLAR--------------FGDRFRPVQAVYDEIGDVLAD 114
Query: 213 ILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVG 272
+ G DA+L+DLG+SS+Q++ +RGF+ D PLDMRMDP+ L A D+LN++ E+
Sbjct: 115 LGLPGADAVLLDLGVSSLQLDEADRGFAYAQDAPLDMRMDPELPLTAADVLNTYEAPELA 174
Query: 273 RVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVF 332
RVL EYGEE + +V+ R + ++ LV+L++ P R G A R F
Sbjct: 175 RVLHEYGEERFARKIAGAVVRDRAQEPFTTSARLVELLRRAIPAASQRSGGH--PAKRTF 232
Query: 333 QALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDA- 391
QALRI VN EL L S+L A D L GGR+ V+S+HSLEDR+VK+ + +R A
Sbjct: 233 QALRIEVNGELAALASALPATLDSLRLGGRVAVLSYHSLEDRMVKRALAAA---SRGSAP 289
Query: 392 EGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
G EL + ++R + G G++ P+A E +N R SA+LRV +
Sbjct: 290 PGLPVELAE------HAPYLR--LLGRGGEV-------PTAAEVEVNPRAASARLRVAMR 334
Query: 452 I 452
I
Sbjct: 335 I 335
>gi|400534195|ref|ZP_10797733.1| 16S rRNA m(4)C1402 methyltransferase [Mycobacterium colombiense
CECT 3035]
gi|400332497|gb|EJO89992.1| 16S rRNA m(4)C1402 methyltransferase [Mycobacterium colombiense
CECT 3035]
Length = 338
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/278 (38%), Positives = 150/278 (53%), Gaps = 22/278 (7%)
Query: 116 HIPVMLGEVLDVFSSSRTITS-------FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDP 168
H+PV+L +++ + + T S +D TLGA GH+ + P L+L +G+D DP
Sbjct: 12 HVPVLLERCVELLTPALTRHSPDGSEATLLDATLGAGGHAERFLTDLPGLRL-VGLDRDP 70
Query: 169 SALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDEN--ILRSGVDAILMDLG 226
SAL AR L H + + +DE+ +D +L DLG
Sbjct: 71 SALDIARTRLARFADRITLVHTR----------YDGIAAALDESGYAATESIDGMLFDLG 120
Query: 227 MSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHL 286
+SSMQ++ ERGF+ D PLDMRMDP + L A DI+N++ +AE+ +L YGEE
Sbjct: 121 VSSMQLDRTERGFAYAQDAPLDMRMDPSSPLTAADIVNTYDEAELANILHRYGEERFARR 180
Query: 287 LQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTL 346
+ IV+ R R ST +LV L+ P RR G A R FQALR+AVNDEL TL
Sbjct: 181 IAAHIVRRRAREPFTSTSDLVALLYEAIPAA-ARRTGG-HPAKRTFQALRVAVNDELDTL 238
Query: 347 ESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSII 384
+L A D L GGR+ V+++ SLEDRIVK+ F +
Sbjct: 239 RRALPAALDALDVGGRIVVMAYQSLEDRIVKRLFAQAV 276
>gi|291557117|emb|CBL34234.1| S-adenosyl-methyltransferase MraW [Eubacterium siraeum V10Sc8a]
Length = 308
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/344 (35%), Positives = 180/344 (52%), Gaps = 41/344 (11%)
Query: 112 QQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
++ HIPV+L E ++ + +VDCT G AGHSS I + +L IG D DP A+
Sbjct: 3 EKPIHIPVLLSETIESLDI-KPDGIYVDCTTGFAGHSSEIAKRLTTGRL-IGFDRDPDAV 60
Query: 172 AKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGV---DAILMDLGMS 228
A L +PH I DE++ GV D +LMDLG+S
Sbjct: 61 KAAEEKLKD------YPHT----------LINRKFSTFDESLDEIGVGKVDGVLMDLGVS 104
Query: 229 SMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQ 288
S Q++ ERGFS D PLDMRM ++ L A D++N + ++ ++L EYGEE H +
Sbjct: 105 SYQLDTAERGFSYHEDAPLDMRMS-KSGLSAYDVVNEYSKEQLEKILFEYGEEKFAHGIV 163
Query: 289 NKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLES 348
+ I++AR + +T EL ++++ P ++ R++ + FQA+RI VN EL L+
Sbjct: 164 SGILKARETAPIKTTLELAEIVKRNVP-LKVRKEK--NPCKKTFQAIRIEVNGELDELKK 220
Query: 349 SLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE 408
+ F+ L GGRL +I+FHS+EDRIVK TF RE G +
Sbjct: 221 GMSEAFERLKAGGRLAIITFHSIEDRIVKNTF-------REYCTGC---------TCPPD 264
Query: 409 TWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ + G+ + ++P+T S EE +N R RSAKLRVI+K+
Sbjct: 265 FPVCVCGKKPRGRTVYRKPVTASEEELAVNNRSRSAKLRVIEKL 308
>gi|457094897|gb|EMG25392.1| rRNA small subunit methyltransferase H [Streptococcus parauberis
KRS-02083]
Length = 299
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 120/320 (37%), Positives = 169/320 (52%), Gaps = 36/320 (11%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLL-HGQAHPHLKTHTF 195
+VD TLG AGHS+ ++ E D D A+ A+ L + GQ TF
Sbjct: 10 YVDATLGGAGHSAYLLSQLNENGHLYCFDQDQKAIDNAQVFLKPFIDKGQV-------TF 62
Query: 196 AK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQ 254
K NFR++KS L + + +D IL DLG+SS Q++ ERGFS D PLDMRMD +
Sbjct: 63 IKDNFRNLKSRLASLG----VTEIDGILYDLGVSSPQLDERERGFSYRQDAPLDMRMDTE 118
Query: 255 ASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVT 314
A L A ++N + ++ R+ YGE+ + KI QAR + +T EL +LI+S
Sbjct: 119 AELTAYQVVNHYAFNDLVRIFFRYGEDKFSKQIARKIEQAREIKPIETTAELAELIKSAK 178
Query: 315 PGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDR 374
P +++G A ++FQA+RI VNDEL E S+ D LA GR+ VI+FHSLEDR
Sbjct: 179 PAKELKKKGH--PAKQIFQAIRIEVNDELGAAEESIQQAMDILALDGRISVITFHSLEDR 236
Query: 375 IVKQTF--LSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSA 432
+ KQ F S +D + N I + +Q ++++++PI PS
Sbjct: 237 LTKQLFKEASTVDVPK------------------NIPIIPEHLQP-KFELVSRKPILPSL 277
Query: 433 EEERLNCRCRSAKLRVIQKI 452
EE N R SAKLRV +KI
Sbjct: 278 EELEANNRAHSAKLRVARKI 297
>gi|322421370|ref|YP_004200593.1| S-adenosyl-methyltransferase MraW [Geobacter sp. M18]
gi|320127757|gb|ADW15317.1| S-adenosyl-methyltransferase MraW [Geobacter sp. M18]
Length = 312
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 128/345 (37%), Positives = 179/345 (51%), Gaps = 46/345 (13%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+ EVL + + ++ +VD TLG AGH+ I+ A IG D D A+A A+
Sbjct: 6 HISVLPDEVLGLLAP-KSGGIYVDGTLGGAGHAGLILAASAPQGQLIGFDRDAEAIAVAK 64
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAI---LMDLGMSSMQV 232
L + F +NF I L +I GVDAI ++DLG+SS Q+
Sbjct: 65 ERLAPFGD-------RVRIFQRNFSSIAQTLAEI-------GVDAIDGFVLDLGVSSHQL 110
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ ERGFS D PLDMRMD + A D++N+ +AE+ R++ EYGEE + + IV
Sbjct: 111 DKDERGFSFQADAPLDMRMDRSSGPSAADLVNTLSEAELNRIIAEYGEERWAKRVASFIV 170
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
+AR + +T +LVD+I+ P + + + + ATR FQ LRIAVN+ELK+L+ L
Sbjct: 171 KAREERPIETTMQLVDIIKGAIP--KAKWEERLHPATRTFQGLRIAVNEELKSLQLGLTD 228
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
L GGR VISFHSLEDRIVK+ F RD T +
Sbjct: 229 LLKLLKRGGRGAVISFHSLEDRIVKEAF---------------------RDAAAGCTCPK 267
Query: 413 QIIQGWNG-----KILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++ G K+LTK+ + +E N R RSA+LR I+KI
Sbjct: 268 ELPICVCGRVPQYKVLTKKALKAGEKELNANPRSRSARLRGIEKI 312
>gi|332522739|ref|ZP_08398991.1| S-adenosyl-methyltransferase MraW [Streptococcus porcinus str.
Jelinkova 176]
gi|332314003|gb|EGJ26988.1| S-adenosyl-methyltransferase MraW [Streptococcus porcinus str.
Jelinkova 176]
Length = 316
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/341 (37%), Positives = 180/341 (52%), Gaps = 37/341 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+L E +D+ + +VD TLG AGHS+ ++ E D D A+ A+
Sbjct: 7 HITVLLHETVDMLRV-KPDGIYVDATLGGAGHSAYLLSQLNEHGHLYCFDQDQKAIDNAQ 65
Query: 176 AHLNSLLH-GQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
L + G TF K NFRH+KS Q+ + + S +D IL DLG+SS Q++
Sbjct: 66 IFLAPFIEKGMV-------TFIKDNFRHLKS---QMQAHGVDS-IDGILYDLGVSSPQLD 114
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
ERGFS D PLDMRMD ASL A ++N + ++ R+ YGE+ + KI Q
Sbjct: 115 ERERGFSYRQDAPLDMRMDSDASLTAYHVVNDYSFNDLVRIFFRYGEDRFSKQIARKIEQ 174
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +T EL +LI+S P +++G A ++FQA+RI VNDEL E SL
Sbjct: 175 ARAIKPIETTTELAELIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAAEESLQQA 232
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTF--LSIIDHNREDAEGNEEELRNIRDDNINETWI 411
D LA G + VI+FHSLEDR+ KQ F S++D + +I
Sbjct: 233 MDLLAVEGHISVITFHSLEDRLTKQLFKEASVVDVPK------------------GIPFI 274
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ +Q ++++++PI PS EE N R SAKLRV +KI
Sbjct: 275 PEEMQP-KFELVSRKPILPSKEELAENNRAHSAKLRVARKI 314
>gi|139473295|ref|YP_001128010.1| S-adenosyl-methyltransferase MraW [Streptococcus pyogenes str.
Manfredo]
gi|410681032|ref|YP_006933434.1| S-adenosyl-methyltransferase MraW [Streptococcus pyogenes A20]
gi|417856450|ref|ZP_12501509.1| 16S rRNA m(4)C1402 methyltransferase [Streptococcus pyogenes HKU
QMH11M0907901]
gi|54037826|sp|P65433.1|RSMH_STRP8 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|54041488|sp|P65431.1|RSMH_STRP1 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|88909223|sp|Q48RZ0.2|RSMH_STRPM RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|262826830|sp|A2RD40.1|RSMH_STRPG RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|262831446|sp|Q1JAG5.2|RSMH_STRPB RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|262831450|sp|Q1JKL7.2|RSMH_STRPC RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|262831454|sp|Q1JFK8.2|RSMH_STRPD RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|342179310|sp|P0DC36.1|RSMH_STRP3 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|342179311|sp|P0DC37.1|RSMH_STRPQ RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|134271541|emb|CAM29765.1| S-adenosyl-methyltransferase MraW [Streptococcus pyogenes str.
Manfredo]
gi|387933405|gb|EIK41518.1| 16S rRNA m(4)C1402 methyltransferase [Streptococcus pyogenes HKU
QMH11M0907901]
gi|409693621|gb|AFV38481.1| S-adenosyl-methyltransferase MraW [Streptococcus pyogenes A20]
Length = 316
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/341 (34%), Positives = 185/341 (54%), Gaps = 37/341 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG +GHS+ ++ E D D A+ A+
Sbjct: 7 HVTVLLHETVDMLDI-KPDGIYVDATLGGSGHSAYLLSKLGEEGHLYCFDQDQKAIDNAQ 65
Query: 176 AHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQ--IDENILRSGVDAILMDLGMSSMQ 231
L S + GQ TF K NFRH+K+ L +DE +D IL DLG+SS Q
Sbjct: 66 VTLKSYIDKGQV-------TFIKDNFRHLKARLTALGVDE------IDGILYDLGVSSPQ 112
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ ERGFS D PLDMRMD Q+ L A +++N++P ++ ++ +YGE+ + KI
Sbjct: 113 LDERERGFSYKQDAPLDMRMDRQSLLTAYEVVNTYPFNDLVKIFFKYGEDKFSKQIARKI 172
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
QAR + +T EL +LI++ P +++G A ++FQA+RI VNDEL + S+
Sbjct: 173 EQARAIKPIETTTELAELIKAAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADESIQ 230
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
+ LA GR+ VI+FHSLEDR+ KQ F +E + + + + +++ +
Sbjct: 231 DAMELLALDGRISVITFHSLEDRLTKQLF-------KEASTVDVPKGLPLIPEDMKPKF- 282
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++++++PI PS E N R SAKLRV +KI
Sbjct: 283 ---------ELVSRKPILPSHSELTANKRAHSAKLRVAKKI 314
>gi|440910252|gb|ELR60067.1| Putative S-adenosyl-L-methionine-dependent methyltransferase
METT5D1 [Bos grunniens mutus]
Length = 407
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/353 (34%), Positives = 183/353 (51%), Gaps = 33/353 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HIPVM+ EV+ + + F+D T G+ GH+ AI++ P++ L+ +D DP+A A A
Sbjct: 72 HIPVMVDEVVRCLAPQKG-QVFLDMTFGSGGHTRAILQKEPDITLY-ALDRDPTAYAIAE 129
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGV-----DAILMDLGMSSM 230
L+ L + K R I Q + ++++GV D +L+DLG SSM
Sbjct: 130 -QLSEL-------------YPKQIRAILGQFSQAEALLMKAGVQPGTLDGVLLDLGCSSM 175
Query: 231 QVNNPERGFSVLGDGPLDMRMD----PQASLKAEDILNSWPDAEVGRVLREYGEESNWHL 286
Q++ PERGFS+ DGPLDMRMD P A D++N+ + +LR YGEE +
Sbjct: 176 QLDTPERGFSLRKDGPLDMRMDGDRYPDMP-TAADVVNALDQQALASILRAYGEEKHAKK 234
Query: 287 LQNKIVQARLRGGLHSTGELVDLIQSVTP--GMRGRR---QGWIKTATRVFQALRIAVND 341
+ + I+QAR + T +L ++ P + R+ Q AT+ FQA RI VN+
Sbjct: 235 IASAIIQARGLYPITRTQQLASIVAGAFPPSALYARKDLLQRSTHIATKTFQAFRIFVNN 294
Query: 342 ELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELR-- 399
EL L + L L PGG L +SFHSLEDRI+K+ L I R + ++ ++
Sbjct: 295 ELNELYTGLKTAQKFLRPGGHLVALSFHSLEDRIIKRFLLGISMTERFNLSARQKVIQKS 354
Query: 400 NIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ D N+ + K++ K+ +TP E+ + N R RSAKLR K+
Sbjct: 355 QLDSDQENKEGVSTGKAPLMWKLIHKKVLTPEDEDVQDNPRGRSAKLRAAIKL 407
>gi|315611782|ref|ZP_07886704.1| S-adenosyl-methyltransferase MraW [Streptococcus sanguinis ATCC
49296]
gi|315316197|gb|EFU64227.1| S-adenosyl-methyltransferase MraW [Streptococcus sanguinis ATCC
49296]
Length = 316
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 184/345 (53%), Gaps = 45/345 (13%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 7 HVTVLLHETIDMLDV-KPDGIYVDATLGGAGHSEYLLSKLSEKGHLYAFDQDQNAIDNAQ 65
Query: 176 AHLNSLLHGQAHPHLKTH--TFAK-NFRHIKSVLGQIDENILRSGV---DAILMDLGMSS 229
L P+++ TF K NFRH+++ L + +GV D I DLG+SS
Sbjct: 66 KRLA--------PYIEKGMVTFIKDNFRHLQARLQE-------AGVQEIDGICYDLGVSS 110
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
Q++ ERGFS D PLDMRM+ +ASL A +++N + ++ R+ +YGE+ +
Sbjct: 111 PQLDQRERGFSYKKDAPLDMRMNQEASLTAYEVVNHYDYHDLVRIFFKYGEDKFSKQIAR 170
Query: 290 KIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESS 349
KI QAR + +T EL ++I+S P +++G A ++FQA+RI VNDEL + S
Sbjct: 171 KIEQAREVKPIETTAELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADES 228
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNIN 407
+ D LA GR+ VI+FHSLEDR+ KQ F ++A E + L I DD
Sbjct: 229 IQQAMDMLALDGRISVITFHSLEDRLTKQLF--------KEASTVEVPKGLPFIPDD--- 277
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++++++PI PSAEE N R SAKLRV +KI
Sbjct: 278 --------LKPKMELVSRKPILPSAEELEANNRSHSAKLRVARKI 314
>gi|403724541|ref|ZP_10946072.1| ribosomal RNA small subunit methyltransferase H [Gordonia
rhizosphera NBRC 16068]
gi|403205540|dbj|GAB90403.1| ribosomal RNA small subunit methyltransferase H [Gordonia
rhizosphera NBRC 16068]
Length = 346
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/273 (39%), Positives = 153/273 (56%), Gaps = 21/273 (7%)
Query: 116 HIPVMLGEVLDVFSSSRTITS-----FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSA 170
H+PVM ++++ + T FVD TLGA GH+ ++RAH ++++ IG+D D +A
Sbjct: 30 HVPVMADRMIELILPALTAHGADAPIFVDATLGAGGHTELVLRAHEDVRV-IGIDRDTTA 88
Query: 171 LAKARAHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSS 229
L AR L + TF + F I VL E++ +DA L DLG+SS
Sbjct: 89 LDIARERLAD--------YAGRITFHQARFDEIGDVL----EDLGIDRIDAALFDLGVSS 136
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
MQ++ P+RGF+ D PLDMRMD + A DILN++P E+ R+L EYGEE + +
Sbjct: 137 MQLDRPDRGFAYAVDAPLDMRMDISEPMTAADILNTYPHGELARILSEYGEERFAGKIAS 196
Query: 290 KIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESS 349
I++ R R ++ LV+L+ + P R G A R FQALRI VN EL L +
Sbjct: 197 AIIREREREPFTTSARLVELLYATIPAATRRTGGH--PAKRTFQALRIEVNHELDALRRA 254
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLS 382
+ A L GGR+ V+S+ SLEDRI+K+ F S
Sbjct: 255 IPAALAALRVGGRVAVMSYQSLEDRIIKREFAS 287
>gi|386363213|ref|YP_006072544.1| S-adenosyl-methyltransferase MraW [Streptococcus pyogenes Alab49]
gi|350277622|gb|AEQ24990.1| S-adenosyl-methyltransferase MraW [Streptococcus pyogenes Alab49]
Length = 316
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/341 (34%), Positives = 185/341 (54%), Gaps = 37/341 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG +GHS+ ++ E D D A+ A+
Sbjct: 7 HVTVLLHETVDMLDI-KPDGIYVDATLGGSGHSAYLLSKLGEEGHLYCFDQDQKAIDNAQ 65
Query: 176 AHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQ--IDENILRSGVDAILMDLGMSSMQ 231
L S + GQ TF K NFRH+K+ L +DE +D IL DLG+SS Q
Sbjct: 66 VTLQSYIDKGQV-------TFIKDNFRHLKARLTALGVDE------IDGILYDLGVSSPQ 112
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ ERGFS D PLDMRMD Q+ L A +++N++P ++ ++ +YGE+ + KI
Sbjct: 113 LDERERGFSYKQDAPLDMRMDRQSLLTAYEVVNTYPFNDLVKIFFKYGEDKFSKQIARKI 172
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
QAR + +T EL +LI++ P +++G A ++FQA+RI VNDEL + S+
Sbjct: 173 EQARAIKPIETTTELAELIKAAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADESIQ 230
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
+ LA GR+ VI+FHSLEDR+ KQ F +E + + + + +++ +
Sbjct: 231 DAMELLALDGRISVITFHSLEDRLTKQLF-------KEASTVDVPKGLPLIPEDMKPKF- 282
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++++++PI PS E N R SAKLRV +KI
Sbjct: 283 ---------ELVSRKPILPSHSELTANKRAHSAKLRVAKKI 314
>gi|269123556|ref|YP_003306133.1| S-adenosyl-methyltransferase MraW [Streptobacillus moniliformis DSM
12112]
gi|268314882|gb|ACZ01256.1| S-adenosyl-methyltransferase MraW [Streptobacillus moniliformis DSM
12112]
Length = 309
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/342 (34%), Positives = 172/342 (50%), Gaps = 45/342 (13%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+PV+ EVL+ + + ++DCTLG GHS I+ + I +D D +A+ A
Sbjct: 4 HLPVLYDEVLENIIDKKDLI-YMDCTLGGGGHSEGILSNSTDNSKLIAIDQDENAIKYAS 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSV--LGQIDENILRSGVDAILMDLGMSSMQVN 233
L + K F NF ++ V L D+ VD ILMD+G+SS Q++
Sbjct: 63 ERLKKFGN-------KVSIFKNNFENLDIVAYLAGFDK------VDRILMDIGVSSKQLD 109
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
+ +RGFS + LDMRMD L A +++N++ + E+ +L +YGEE + IV+
Sbjct: 110 DDKRGFSYRKEAKLDMRMDESQKLSAYEVINNYKEEEIADILYKYGEEPKSRRIAKYIVE 169
Query: 294 ARLRGGLHSTGELVDL-IQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
R + +T EL D+ I+++ M+ A R FQA+RI VN EL+ LE +L
Sbjct: 170 YRKNKSIETTIELADIVIKAIGKSMKKH------PAKRTFQAIRIYVNRELEVLEKALDK 223
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
+ L PGGRL VI+FHSLEDRIVK+ F ++ +
Sbjct: 224 SIELLNPGGRLLVITFHSLEDRIVKEKFRKY-------------------ENPCTCPYDL 264
Query: 413 QIIQGWN---GKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
I + N GK+LT++PI +E N R SAKLRV K
Sbjct: 265 PICKCGNKSKGKVLTRKPIVSKEKELEANNRAHSAKLRVFIK 306
>gi|153854700|ref|ZP_01995950.1| hypothetical protein DORLON_01948 [Dorea longicatena DSM 13814]
gi|149752804|gb|EDM62735.1| S-adenosyl-methyltransferase MraW [Dorea longicatena DSM 13814]
Length = 311
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/315 (35%), Positives = 168/315 (53%), Gaps = 29/315 (9%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
+VD TLG GH+ + R E IG+D D +A+ A L G+ K
Sbjct: 25 YVDGTLGGGGHAYEVCRRLGEKGSIIGIDQDEAAIEAASVRLKDF--GE-----KVTIIR 77
Query: 197 KNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQAS 256
N+ +KS L ++ + VD I++DLG+SS Q++ ERGFS D PLDMRMD +
Sbjct: 78 SNYCDMKSKLHELGID----KVDGIVLDLGVSSYQLDTAERGFSYREDAPLDMRMDRRQK 133
Query: 257 LKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPG 316
+ A DI+N + + ++ RV+R+YGE+ + IV AR + +TG+L ++I++ P
Sbjct: 134 MTARDIVNDYSEMDLYRVIRDYGEDKFAKNIAKHIVAARGTNPIETTGQLTEIIRASIPM 193
Query: 317 MRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIV 376
++ G A R FQA+RI +N EL L++SL + L PGGRL +I+FHSLEDRIV
Sbjct: 194 KYQKKSGH--PAKRTFQAIRIELNRELDVLKNSLDDMIEILNPGGRLCIITFHSLEDRIV 251
Query: 377 KQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEER 436
K F + NE D + + G ++T++PI PS EE
Sbjct: 252 KSAF-----------KKNENPCTCPPDFPVCVCG-----KVSKGCVVTRKPILPSEEELE 295
Query: 437 LNCRCRSAKLRVIQK 451
N R +SAKLR+ ++
Sbjct: 296 YNSRSKSAKLRIFER 310
>gi|355752250|gb|EHH56370.1| Putative S-adenosyl-L-methionine-dependent methyltransferase
METT5D1 [Macaca fascicularis]
Length = 407
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 128/374 (34%), Positives = 199/374 (53%), Gaps = 47/374 (12%)
Query: 100 NKDYDYESIIQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELK 159
++D D+E++ + HIPVM+ EV+ S + F+D T G+ GH+ AI++ ++
Sbjct: 60 SQDRDFETMAK----LHIPVMVDEVVHCLSPQKG-QIFLDMTFGSGGHTKAILQKESDIV 114
Query: 160 LHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDEN---ILRS 216
L +D DP+A A A HL+ L +P + I++VLGQ + + ++
Sbjct: 115 L-WALDRDPTAYALAE-HLSEL-----YP-----------KQIRAVLGQFSQAEALLTKA 156
Query: 217 GV-----DAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMD----PQASLKAEDILNSWP 267
GV D +LMDLG SSMQ++ PERGFS+ DGPLDMRMD P A D++N+
Sbjct: 157 GVQPGTFDGVLMDLGCSSMQLDTPERGFSLRKDGPLDMRMDGGRYPDMP-TAADVVNALD 215
Query: 268 DAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTP--GMRGRR---Q 322
+ +LR YGEE + + + IVQAR + T +L ++ P + R+ Q
Sbjct: 216 QLALASILRTYGEEKHARKIASAIVQARSIYPITRTQQLASIVAGAFPPSAIYARKDLLQ 275
Query: 323 GWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLS 382
AT+ FQAL I VN+EL L + L L PGGRL +SFHSLEDRI+K+ L
Sbjct: 276 RSTHIATKTFQALHIFVNNELNELYTGLKTAQKFLRPGGRLVALSFHSLEDRIIKRFLLG 335
Query: 383 IIDHNREDAEGNEEELRNIR----DDNINETWIRQIIQGWNGKILTKRPITPSAEEERLN 438
I + + ++ ++ + +N E +R+ W +++ K+ ++P ++ + N
Sbjct: 336 ISMTEKFNLSVRQQVMKTSQLGSGHENTEEVSMRRAPLMW--ELIHKKVLSPQDQDVQDN 393
Query: 439 CRCRSAKLRVIQKI 452
R RSAKLR K+
Sbjct: 394 PRGRSAKLRAAVKL 407
>gi|209559798|ref|YP_002286270.1| S-adenosyl-methyltransferase MraW [Streptococcus pyogenes NZ131]
gi|262827234|sp|B5XML3.1|RSMH_STRPZ RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|209540999|gb|ACI61575.1| S-adenosyl-methyltransferase mraW [Streptococcus pyogenes NZ131]
Length = 316
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/341 (34%), Positives = 185/341 (54%), Gaps = 37/341 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG +GHS+ ++ E D D A+ A+
Sbjct: 7 HVTVLLHETVDMLDI-KPDGIYVDATLGGSGHSAYLLSKLGEEGHLYCFDQDQKAIDNAQ 65
Query: 176 AHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQ--IDENILRSGVDAILMDLGMSSMQ 231
L S + GQ TF K NFRH+K+ L +DE +D IL DLG+SS Q
Sbjct: 66 VTLKSYIDKGQV-------TFIKDNFRHLKARLTALGVDE------IDGILYDLGVSSPQ 112
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ ERGFS D PLDMRMD Q+ L A +++N++P ++ ++ +YGE+ + KI
Sbjct: 113 LDERERGFSYKQDAPLDMRMDRQSLLTAYEVVNTYPFNDLVKIFFKYGEDKFSKQIARKI 172
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
QAR + +T EL +LI++ P +++G A ++FQA+RI VNDEL + S+
Sbjct: 173 EQARAIKPIEATTELAELIKAAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADESIQ 230
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
+ LA GR+ VI+FHSLEDR+ KQ F +E + + + + +++ +
Sbjct: 231 DAMELLALDGRISVITFHSLEDRLTKQLF-------KEASTVDVPKGLPLIPEDMKPKF- 282
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++++++PI PS E N R SAKLRV +KI
Sbjct: 283 ---------ELVSRKPILPSHSELTANKRAHSAKLRVAKKI 314
>gi|449130949|ref|ZP_21767167.1| ribosomal RNA small subunit methyltransferase H [Treponema
denticola SP37]
gi|448941253|gb|EMB22156.1| ribosomal RNA small subunit methyltransferase H [Treponema
denticola SP37]
Length = 315
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/345 (36%), Positives = 170/345 (49%), Gaps = 41/345 (11%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
Q H V+L E L+ + FVD TLG GH+ A ++ +P+L IGVD D S
Sbjct: 2 QPVHTSVLLEECLEFLKPDVSDNLFVDGTLGEGGHTEAFLKRYPQLNA-IGVDADVSIQE 60
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDA-----ILMDLGM 227
+A+ L G+ I+ LG DE D+ IL+DLG+
Sbjct: 61 RAKERLKPF--GE---------------RIRFHLGWSDEFFKNYPKDSAPPNLILLDLGI 103
Query: 228 SSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLL 287
S RGFS D PLDMR++P+ L A DI+NS+ + ++ ++ YGEE +
Sbjct: 104 SMFHYVKSGRGFSFSSDEPLDMRLNPELRLSAADIVNSYNEKDLADLIFNYGEERYSRKI 163
Query: 288 QNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLE 347
++IV+ R + EL D I P + R G I AT+ FQALRIAVN EL L
Sbjct: 164 ASRIVEQRAVSAFSTAKELADCIYKAVP--QNYRHGKIHPATKTFQALRIAVNGELDRLP 221
Query: 348 SSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNIN 407
L A F LAP GRLG+I+FHSLEDRIVK F + + + I
Sbjct: 222 RLLEAAFSVLAPKGRLGLITFHSLEDRIVKFYFKEL-----------GKSCTCPENMPIC 270
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ R ++LTK+ + S EE RLN RSA+LRV++KI
Sbjct: 271 KCGGRP-----RAEVLTKKAVKASDEEIRLNPPSRSARLRVVRKI 310
>gi|238060255|ref|ZP_04604964.1| S-adenosyl-methyltransferase mraW [Micromonospora sp. ATCC 39149]
gi|237882066|gb|EEP70894.1| S-adenosyl-methyltransferase mraW [Micromonospora sp. ATCC 39149]
Length = 366
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/345 (33%), Positives = 174/345 (50%), Gaps = 38/345 (11%)
Query: 113 QSSHIPVMLGEVLDVFSSS-----RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVD 167
+ +H+PV+L L++ + + RT+ VD TLG AGH+ A++ HP L IG+D D
Sbjct: 5 RGTHVPVLLERCLELLAPALARGDRTV--HVDATLGLAGHAEAVLERHPHTVL-IGLDRD 61
Query: 168 PSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGM 227
ALA AR L + H + + VLG++ +D +L DLG+
Sbjct: 62 TEALAHARVRLARFAD-------RVHLEHAVYDELPEVLGRLGY----PAIDGVLFDLGV 110
Query: 228 SSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLL 287
SS+Q++ P+RGF+ D PLDMRMD + AE+++N++ ++ RVLR YGEE +
Sbjct: 111 SSLQLDAPDRGFAYAQDAPLDMRMDQTRGVTAEEVVNTYSHPDLARVLRVYGEEKFAPRI 170
Query: 288 QNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLE 347
+ I++ R R + S+ L +L++ P RR G A R FQALRI VN EL LE
Sbjct: 171 ASAILRERERARITSSARLAELVRESIPAP-ARRTGG-HPAKRTFQALRIEVNRELAALE 228
Query: 348 SSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNIN 407
++L A D L GGR+ V+S+HSLEDR+ K +R
Sbjct: 229 TALPAALDKLTVGGRMVVLSYHSLEDRLTKAALTD-----------------RVRSKGPV 271
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ + G ++L++ P E N R S +LR ++I
Sbjct: 272 DLPVELPGSGPTFRLLSRGAELPGEAEVAANPRAASVRLRAAERI 316
>gi|302561117|ref|ZP_07313459.1| methylase MraW [Streptomyces griseoflavus Tu4000]
gi|302478735|gb|EFL41828.1| methylase MraW [Streptomyces griseoflavus Tu4000]
Length = 318
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/273 (38%), Positives = 150/273 (54%), Gaps = 22/273 (8%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITS--FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSA 170
QS H+PVML LD+ + + VDCTLG GHS A++R PE +L + +D D A
Sbjct: 3 QSRHVPVMLQRCLDLLAPALEGPGAVVVDCTLGLGGHSEALLRRFPEARL-VALDRDKEA 61
Query: 171 LAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGV---DAILMDLGM 227
L L G+ + F + + +V ++ + + R G+ +L DLG+
Sbjct: 62 LR---------LSGE-----RLAPFGERATLVHAVYDELPDVLGRLGIARAQGVLFDLGV 107
Query: 228 SSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLL 287
SSMQ++ RGF+ D PLDMRMD + A ++LN++P E+ R+LR YGEE +
Sbjct: 108 SSMQLDEAGRGFAYAQDAPLDMRMDQTTGVSAAEVLNTYPPGELVRILRAYGEEKQAKRI 167
Query: 288 QNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLE 347
+ IV+ R + ++ LV+LI+ P R G A R FQALRI VN EL LE
Sbjct: 168 VSAIVREREKEPFTNSARLVELIRDALPQAAKRTGG--NPAKRTFQALRIEVNGELSVLE 225
Query: 348 SSLHACFDCLAPGGRLGVISFHSLEDRIVKQTF 380
++ A L GGR+ V+S+HSLEDR+VKQ F
Sbjct: 226 RAIPAAVKALGVGGRIAVLSYHSLEDRLVKQVF 258
>gi|15841657|ref|NP_336694.1| S-adenosyl-methyltransferase MraW [Mycobacterium tuberculosis
CDC1551]
gi|161511532|ref|NP_855838.2| S-adenosyl-methyltransferase MraW [Mycobacterium bovis AF2122/97]
gi|254551204|ref|ZP_05141651.1| S-adenosyl-methyltransferase MraW [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|294993552|ref|ZP_06799243.1| S-adenosyl-methyltransferase MraW [Mycobacterium tuberculosis 210]
gi|297634755|ref|ZP_06952535.1| S-adenosyl-methyltransferase MraW [Mycobacterium tuberculosis KZN
4207]
gi|307084822|ref|ZP_07493935.1| S-adenosyl-methyltransferase MraW [Mycobacterium tuberculosis
SUMu012]
gi|308369641|ref|ZP_07666771.1| hypothetical protein TMBG_00713 [Mycobacterium tuberculosis
SUMu002]
gi|313659080|ref|ZP_07815960.1| 16S rRNA m(4)C1402 methyltranserfase [Mycobacterium tuberculosis
KZN V2475]
gi|385991510|ref|YP_005909808.1| hypothetical protein [Mycobacterium tuberculosis CCDC5180]
gi|385995128|ref|YP_005913426.1| hypothetical protein [Mycobacterium tuberculosis CCDC5079]
gi|385998942|ref|YP_005917241.1| S-adenosyl-methyltransferase MraW [Mycobacterium tuberculosis
CTRI-2]
gi|386005105|ref|YP_005923384.1| 16S rRNA m(4)C1402 methyltransferase [Mycobacterium tuberculosis
RGTB423]
gi|392386811|ref|YP_005308440.1| mraW [Mycobacterium tuberculosis UT205]
gi|424947851|ref|ZP_18363547.1| S-adenosyl-methyltransferase [Mycobacterium tuberculosis NCGM2209]
gi|433627283|ref|YP_007260912.1| Conserved protein of unknown function [Mycobacterium canettii CIPT
140060008]
gi|54037824|sp|P65430.1|RSMH_MYCBO RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|54041487|sp|P65429.1|RSMH_MYCTU RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|262831560|sp|A5U4J2.2|RSMH_MYCTA RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|263460389|sp|A1KKK8.2|RSMH_MYCBP RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|263460410|sp|C1AQ81.2|RSMH_MYCBT RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|13881910|gb|AAK46508.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
gi|308326909|gb|EFP15760.1| hypothetical protein TMBG_00713 [Mycobacterium tuberculosis
SUMu002]
gi|308365608|gb|EFP54459.1| S-adenosyl-methyltransferase MraW [Mycobacterium tuberculosis
SUMu012]
gi|339295082|gb|AEJ47193.1| hypothetical protein CCDC5079_2003 [Mycobacterium tuberculosis
CCDC5079]
gi|339298703|gb|AEJ50813.1| hypothetical protein CCDC5180_1976 [Mycobacterium tuberculosis
CCDC5180]
gi|344219989|gb|AEN00620.1| S-adenosyl-methyltransferase MraW [Mycobacterium tuberculosis
CTRI-2]
gi|358232366|dbj|GAA45858.1| S-adenosyl-methyltransferase [Mycobacterium tuberculosis NCGM2209]
gi|378545362|emb|CCE37639.1| mraW [Mycobacterium tuberculosis UT205]
gi|379028443|dbj|BAL66176.1| S-adenosyl-methyltransferase [Mycobacterium tuberculosis str.
Erdman = ATCC 35801]
gi|380725593|gb|AFE13388.1| 16S rRNA m(4)C1402 methyltransferase [Mycobacterium tuberculosis
RGTB423]
gi|432154889|emb|CCK52131.1| Conserved protein of unknown function [Mycobacterium canettii CIPT
140060008]
Length = 344
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/282 (38%), Positives = 151/282 (53%), Gaps = 30/282 (10%)
Query: 116 HIPVMLGEVLDVFSSSRT-------ITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDP 168
H+PV+ ++ + + T +D T+GA GH+ + P L+L IG+D DP
Sbjct: 13 HVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRL-IGLDRDP 71
Query: 169 SALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG------VDAIL 222
+AL AR+ L FA + + + + SG VD IL
Sbjct: 72 TALDVARSRLVR--------------FADRLTLVHTRYDCLGAALAESGYAAVGSVDGIL 117
Query: 223 MDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEES 282
DLG+SSMQ++ ERGF+ D PLDMRMDP L A DI+N++ +A + +LR YGEE
Sbjct: 118 FDLGVSSMQLDRAERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEER 177
Query: 283 NWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDE 342
+ IV+ R + ST ELV L+ P RR G A R FQALRIAVNDE
Sbjct: 178 FARRIAAGIVRRRAKTPFTSTAELVALLYQAIPAP-ARRVGG-HPAKRTFQALRIAVNDE 235
Query: 343 LKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSII 384
L++L +++ A D LA GGR+ V+++ SLEDRIVK+ F +
Sbjct: 236 LESLRTAVPAALDALAIGGRIAVLAYQSLEDRIVKRVFAEAV 277
>gi|449125926|ref|ZP_21762228.1| ribosomal RNA small subunit methyltransferase H [Treponema
denticola OTK]
gi|448939895|gb|EMB20812.1| ribosomal RNA small subunit methyltransferase H [Treponema
denticola OTK]
Length = 315
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/345 (36%), Positives = 170/345 (49%), Gaps = 41/345 (11%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
Q H V+L E L+ + FVD TLG GH+ A ++ +P+L IGVD D S
Sbjct: 2 QPVHTSVLLEECLEFLKPDVSDNLFVDGTLGEGGHTEAFLKRYPQLNA-IGVDADVSIQE 60
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDA-----ILMDLGM 227
+A+ L G+ I+ LG DE D+ IL+DLG+
Sbjct: 61 RAKERLKPF--GE---------------RIRFHLGWSDEFFKNYPKDSAPPNLILLDLGI 103
Query: 228 SSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLL 287
S RGFS D PLDMR++P+ L A DI+NS+ + ++ ++ YGEE +
Sbjct: 104 SMFHYVKSGRGFSFSSDEPLDMRLNPELRLSAADIVNSYNEKDLADLIFNYGEERYSRKI 163
Query: 288 QNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLE 347
++IV+ R + EL D I P + R G I AT+ FQALRIAVN EL L
Sbjct: 164 ASRIVEQRDAAAFSTAKELADCIYKAVP--QNYRHGKIHPATKTFQALRIAVNGELDRLP 221
Query: 348 SSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNIN 407
L A F LAP GRLG+I+FHSLEDRIVK F + + + I
Sbjct: 222 RLLEAAFSVLAPNGRLGLITFHSLEDRIVKFYFKEL-----------GKSCTCPENMPIC 270
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ R ++LTK+ + S EE RLN RSA+LRV++KI
Sbjct: 271 KCGGRP-----RAEVLTKKAVKASDEEIRLNPPSRSARLRVVRKI 310
>gi|346307092|ref|ZP_08849236.1| ribosomal RNA small subunit methyltransferase H 2 [Dorea
formicigenerans 4_6_53AFAA]
gi|345906892|gb|EGX76612.1| ribosomal RNA small subunit methyltransferase H 2 [Dorea
formicigenerans 4_6_53AFAA]
Length = 311
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/335 (36%), Positives = 174/335 (51%), Gaps = 30/335 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + + +VD TLG GH+ + R E +G+D D +A+ A
Sbjct: 5 HKSVLLNETIDGLNI-KPDGIYVDGTLGGGGHAYEVCRRLGEKGSIVGIDQDAAAIEAAS 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
A L G+ K N+ +KS L ++ + VD I++DLG+SS Q++
Sbjct: 64 ARLKDF--GE-----KVTIVRSNYCDMKSKLHELGID----KVDGIVLDLGVSSYQLDTA 112
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D PLDMRMD + + A DI+N + +A++ RV+R+YGE+ + IVQAR
Sbjct: 113 ERGFSYREDAPLDMRMDTRQKMTARDIVNDYTEADLYRVIRDYGEDKFAKNIAKHIVQAR 172
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +T EL ++I++ P ++ G A R FQA+RI +N EL L SL D
Sbjct: 173 AVKPVETTAELSEIIRASIPMKFQKKSGH--PAKRTFQAIRIELNRELDVLRDSLDDMID 230
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L PGGR +I+FHSLEDRIVK F NE D +
Sbjct: 231 LLNPGGRFCIITFHSLEDRIVKSAF-----------RKNENPCTCPPDFPVCVCG----- 274
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
+ G I+TK+PI PS EE N R +SAKLR+ +
Sbjct: 275 KKSKGSIITKKPILPSEEELEYNSRSKSAKLRIFE 309
>gi|300788105|ref|YP_003768396.1| S-adenosyl-methyltransferase [Amycolatopsis mediterranei U32]
gi|384151536|ref|YP_005534352.1| S-adenosyl-methyltransferase [Amycolatopsis mediterranei S699]
gi|399539988|ref|YP_006552650.1| S-adenosyl-methyltransferase [Amycolatopsis mediterranei S699]
gi|299797619|gb|ADJ47994.1| S-adenosyl-methyltransferase [Amycolatopsis mediterranei U32]
gi|340529690|gb|AEK44895.1| S-adenosyl-methyltransferase [Amycolatopsis mediterranei S699]
gi|398320758|gb|AFO79705.1| S-adenosyl-methyltransferase [Amycolatopsis mediterranei S699]
Length = 317
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/340 (35%), Positives = 168/340 (49%), Gaps = 35/340 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITS--FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAK 173
H+PV+L ++++F+ T VD T+G GHS A++ A P L+L + +D DP+AL K
Sbjct: 6 HVPVLLSRIVELFTPVFTDRDGVLVDATVGLGGHSDALLEAFPRLRL-VALDRDPAALEK 64
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRH-IKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
+ L H +F H + L + E++ D IL DLG+SSMQ+
Sbjct: 65 SAERLAR------------HGDRVDFVHTVYDGLPEALESVGLEKADGILFDLGVSSMQL 112
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ ERGF+ D PLDMRMDP A D+LN++ E+ R+LR+YGEE + +V
Sbjct: 113 DRAERGFAYSKDSPLDMRMDPTTGFTAADVLNTYAPGELIRILRDYGEERFAQRIVKAVV 172
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
AR + ++G LV+L+ P R G A R FQALRI VN EL+ L ++ A
Sbjct: 173 AAREKEPFTTSGRLVELLYDAVPAATRRTGGH--PAKRTFQALRIEVNGELEVLRRAMPA 230
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
L GGR+ V S+ SLEDR+VKQ + EG EL
Sbjct: 231 ALGALPVGGRIVVESYQSLEDRLVKQALAELAKSR--TPEGLPVELPG------------ 276
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
G K+LT+ EE N R S +LR ++I
Sbjct: 277 ---HGPELKLLTRGAEKAGEEEIERNPRAASVRLRAAERI 313
>gi|357239523|ref|ZP_09126858.1| S-adenosyl-methyltransferase MraW [Streptococcus ictaluri 707-05]
gi|356752092|gb|EHI69222.1| S-adenosyl-methyltransferase MraW [Streptococcus ictaluri 707-05]
Length = 316
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/341 (34%), Positives = 182/341 (53%), Gaps = 37/341 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG +GHS+ ++ + D D +A+ A+
Sbjct: 7 HVTVLLHETVDMLDI-KPDGIYVDATLGGSGHSAYLLSQLNDKGHLYCFDQDQTAIDNAQ 65
Query: 176 AHLNSLLH-GQAHPHLKTHTFAK-NFRHIKSVLGQIDENILR--SGVDAILMDLGMSSMQ 231
L + + GQ TF K NFRH++ L L + +D IL DLG+SS Q
Sbjct: 66 VSLETYIQKGQV-------TFIKSNFRHLREALA------LHGVTEIDGILYDLGVSSPQ 112
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ ERGFS D PLDMRMD QA L A +++N + ++ R+ YGE+ + KI
Sbjct: 113 LDERERGFSYKQDAPLDMRMDRQADLTAYEVVNHYEFNDLVRIFFRYGEDKFSKQIARKI 172
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
QAR + +T EL +LI+S P +++G A ++FQA+RI VNDEL E S+
Sbjct: 173 EQARAVKPIETTTELAELIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAAEESIQ 230
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
D L+ GR+ VI+FHSLEDR+ KQ F +E + + + +++ +
Sbjct: 231 EAMDLLSVDGRISVITFHSLEDRLTKQLF-------KEASSVDVPKGIPFIPEDLKPKF- 282
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++++++PI PS EE + N R SAKLRV +K+
Sbjct: 283 ---------ELVSRKPILPSQEELQHNNRAHSAKLRVAKKV 314
>gi|149001556|ref|ZP_01826529.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
SP14-BS69]
gi|149006085|ref|ZP_01829814.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
SP18-BS74]
gi|237649375|ref|ZP_04523627.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae CCRI
1974]
gi|237821592|ref|ZP_04597437.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae CCRI
1974M2]
gi|418143112|ref|ZP_12779915.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA13494]
gi|419456915|ref|ZP_13996864.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA02254]
gi|421210340|ref|ZP_15667332.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
2070035]
gi|147760014|gb|EDK67003.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
SP14-BS69]
gi|147762441|gb|EDK69402.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
SP18-BS74]
gi|353810855|gb|EHD91105.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA13494]
gi|379533601|gb|EHY98814.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA02254]
gi|395576039|gb|EJG36599.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
2070035]
Length = 316
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 185/345 (53%), Gaps = 45/345 (13%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 7 HVTVLLHETIDMLDV-KPDGIYVDATLGGAGHSEYLLSKLSEKGHLYAFDQDQNAIDNAQ 65
Query: 176 AHLNSLLHGQAHPHLKTH--TFAK-NFRHIKSVLGQIDENILRSGV---DAILMDLGMSS 229
L P+++ TF K NFRH+++ L + +GV D I DLG+SS
Sbjct: 66 KRLA--------PYIEKGMVTFIKDNFRHLQARLRE-------AGVQEIDGICYDLGVSS 110
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
Q++ ERGFS D PLDMRM+ ASL A +++N++ ++ R+ +YGE+ +
Sbjct: 111 PQLDQRERGFSYKKDAPLDMRMNQDASLTAYEVVNNYDYRDLVRIFFKYGEDKFSKQIAR 170
Query: 290 KIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESS 349
KI QAR + +T EL ++I+ V P +++G A ++FQA+RI VNDEL + S
Sbjct: 171 KIEQAREVKPIETTTELAEIIKLVKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADES 228
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNIN 407
+ D LA GR+ VI+FHSLEDR+ KQ F ++A E + L I DD
Sbjct: 229 IQQAMDMLALDGRISVITFHSLEDRLTKQLF--------KEASTVEVPKGLPFIPDD--- 277
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++++++PI PSAEE N R SAKLRV++KI
Sbjct: 278 --------LKPKMELVSRKPILPSAEELEANNRSHSAKLRVVRKI 314
>gi|345014465|ref|YP_004816819.1| ribosomal RNA small subunit methyltransferase H [Streptomyces
violaceusniger Tu 4113]
gi|344040814|gb|AEM86539.1| Ribosomal RNA small subunit methyltransferase H [Streptomyces
violaceusniger Tu 4113]
Length = 310
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/266 (40%), Positives = 149/266 (56%), Gaps = 22/266 (8%)
Query: 120 MLGEVLDVFSSS--RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAH 177
ML LD+ + + + VDCTLG GHS A++R PE +L I +D DPSAL A
Sbjct: 1 MLQRCLDMLAPALAQPGAVVVDCTLGLGGHSEALLRDFPEARL-IALDRDPSALRLAGER 59
Query: 178 LNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGV---DAILMDLGMSSMQVNN 234
L P+ T + +V ++ E + R GV IL DLG+SSMQ++
Sbjct: 60 L--------APYGDRATL------VHAVYDELPEVLDRLGVPRVQGILFDLGVSSMQLDE 105
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
ERGF+ D PLDMRMD + A ++LN++P E+ R+LR YGEE + + +V+
Sbjct: 106 AERGFAYAQDAPLDMRMDQTTGVSAAEVLNTYPPGELVRILRAYGEEKFAKKIVDAVVRE 165
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + ++ LV+LI++ P R G A R FQALRI VN EL LE ++ A
Sbjct: 166 RAKEPFTNSARLVELIRAALPQAAKRTGG--NPAKRTFQALRIEVNGELAVLERAIPAAV 223
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTF 380
LA GGR+ V+S+HSLEDR+VKQ F
Sbjct: 224 GTLAVGGRIAVLSYHSLEDRLVKQVF 249
>gi|335031093|ref|ZP_08524550.1| S-adenosyl-methyltransferase MraW [Streptococcus anginosus SK52 =
DSM 20563]
gi|333770463|gb|EGL47494.1| S-adenosyl-methyltransferase MraW [Streptococcus anginosus SK52 =
DSM 20563]
Length = 316
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 120/341 (35%), Positives = 178/341 (52%), Gaps = 37/341 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 7 HVTVLLHETIDQLDI-KPNGVYVDATLGGAGHSEYLLSKLGENGHLYAFDQDQTAIEHAQ 65
Query: 176 AHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
L S + G TF NFRH+K+ L ++ +D I DLG+SS Q++
Sbjct: 66 KRLASYVEQGMV-------TFINDNFRHLKACLNELG----VEEIDGICYDLGVSSPQLD 114
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
ERGFS D PLDMRM+ +A L A +++N + ++ R+ +YGE+ + KI Q
Sbjct: 115 ERERGFSYKQDAPLDMRMNREAKLTAYEVVNQYSYHDLVRIFFKYGEDKFSKQIARKIEQ 174
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
R + + +T EL ++I+S P +++G A ++FQA+RI VNDEL + S+
Sbjct: 175 MREKKLIETTTELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADESIQQA 232
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTF--LSIIDHNREDAEGNEEELRNIRDDNINETWI 411
D LA GR+ VI+FHSLEDR+ KQ F S +D + +I
Sbjct: 233 MDLLAVDGRISVITFHSLEDRLTKQLFKEASTVDVPK------------------GLPFI 274
Query: 412 RQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ +Q K++T++PI PS EE N R SAKLRV QK+
Sbjct: 275 PEDLQP-KMKLVTRKPILPSKEELDNNNRAHSAKLRVAQKV 314
>gi|306830125|ref|ZP_07463309.1| S-adenosyl-methyltransferase MraW [Streptococcus mitis ATCC 6249]
gi|304427651|gb|EFM30747.1| S-adenosyl-methyltransferase MraW [Streptococcus mitis ATCC 6249]
Length = 316
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/345 (36%), Positives = 183/345 (53%), Gaps = 45/345 (13%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 7 HVTVLLHETIDMLDV-KPDGIYVDATLGGAGHSEYLLSKLSEKGHLYAFDQDQNAIDNAQ 65
Query: 176 AHLNSLLHGQAHPHLKTH--TFAK-NFRHIKSVLGQIDENILRSGV---DAILMDLGMSS 229
L P+++ TF K NFRH+++ L L +GV D I DLG+SS
Sbjct: 66 KRLA--------PYIEKGMVTFIKDNFRHLQARL-------LEAGVQEIDGICYDLGVSS 110
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
Q++ ERGFS D PLDMRM+ ASL A +++N + ++ R+ +YGE+ +
Sbjct: 111 PQLDQRERGFSYKKDAPLDMRMNQDASLTAYEVVNHYDYHDLVRIFFKYGEDKFSKQIAR 170
Query: 290 KIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESS 349
KI QAR + +T EL ++I+S P +++G A ++FQA+RI VNDEL + S
Sbjct: 171 KIEQAREVKPIETTTELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADES 228
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNIN 407
+ D LA GR+ VI+FHSLEDR+ KQ F ++A E + L I DD
Sbjct: 229 IQQAMDMLALDGRISVITFHSLEDRLTKQLF--------KEASTVEVPKGLPFIPDD--- 277
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++++++PI PSAEE N R SAKLRV +KI
Sbjct: 278 --------LKPKMELVSRKPILPSAEELEANNRSHSAKLRVARKI 314
>gi|392329795|ref|ZP_10274411.1| S-adenosyl-methyltransferase MraW [Streptococcus canis FSL Z3-227]
gi|391419667|gb|EIQ82478.1| S-adenosyl-methyltransferase MraW [Streptococcus canis FSL Z3-227]
Length = 337
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/348 (35%), Positives = 186/348 (53%), Gaps = 37/348 (10%)
Query: 109 IQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDP 168
+ ++ H+ V+L E +D+ + +VD TLG +GHS+ ++ E D D
Sbjct: 21 VMTKEFHHVTVLLHETVDMLDI-KPNGIYVDATLGGSGHSAYLLSKLSEQGHLYCFDQDQ 79
Query: 169 SALAKARAHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLG 226
A+ A+ L + GQ TF K NFRH+K+ L E + + +D IL DLG
Sbjct: 80 KAIDNAQFILKPYIDKGQV-------TFIKDNFRHLKARL----EALGVTEIDGILYDLG 128
Query: 227 MSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHL 286
+SS Q++ ERGFS D PLDMRMD QA L A +++N++ ++ ++ +YGE+
Sbjct: 129 VSSPQLDERERGFSYKQDAPLDMRMDRQAPLTAYEVVNTYSFNDLVKLFFKYGEDKCSKQ 188
Query: 287 LQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTL 346
+ KI QAR + +T EL +LI++ P +++G A ++FQA+RI VNDEL
Sbjct: 189 IARKIEQARAVKPIETTTELAELIKAAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAA 246
Query: 347 ESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTF--LSIIDHNREDAEGNEEELRNIRDD 404
+ S+ + LA GR+ VI+FHSLEDR+ KQ F S +D + L I +D
Sbjct: 247 DESIQDAMELLALDGRISVITFHSLEDRLTKQLFKEASTVDVPK--------GLPFIPED 298
Query: 405 NINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++++++PI PS EE +N R SAKLRV +KI
Sbjct: 299 -----------MKPKFELVSRKPILPSQEELAINNRAHSAKLRVARKI 335
>gi|363898942|ref|ZP_09325453.1| ribosomal RNA small subunit methyltransferase H 2 [Oribacterium sp.
ACB1]
gi|395209307|ref|ZP_10398401.1| S-adenosyl-methyltransferase MraW [Oribacterium sp. ACB8]
gi|361959272|gb|EHL12559.1| ribosomal RNA small subunit methyltransferase H 2 [Oribacterium sp.
ACB1]
gi|394704938|gb|EJF12467.1| S-adenosyl-methyltransferase MraW [Oribacterium sp. ACB8]
Length = 312
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/337 (34%), Positives = 174/337 (51%), Gaps = 30/337 (8%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
SH ++L E ++ S + +VD TLG GHS I+ E IG+D D A+ A
Sbjct: 4 SHKSILLNECMEGLSI-KPDGVYVDGTLGGGGHSFHILERLNEKGRLIGIDQDEDAIEAA 62
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
L A + N+ H +++L + VD IL+DLG+SS Q +
Sbjct: 63 TKRL-------AQFEKQVTIVRDNYEHFQAILSALS----IPEVDGILLDLGVSSYQFDE 111
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
+RGFS D PLDMRMD + A+D++N + + E+ ++R+YGE+ + IV
Sbjct: 112 ADRGFSYRFDAPLDMRMDNRQDFTAKDLINDYSETELYHIIRDYGEDKFAKNIAKHIVLE 171
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + + +TGEL ++I P M+ R G A R FQA+RIA+N EL L+ SL
Sbjct: 172 RTKKPIETTGELAEIISHAIP-MKIRVAGG-HPAKRTFQAIRIALNRELDVLKDSLEGMI 229
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
L PGGRL +I+FHSLEDRIVKQ+F + E +D + + +
Sbjct: 230 QSLKPGGRLCIITFHSLEDRIVKQSFRT-----------AENPCICPKDFPVCSCGRKSL 278
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
G+++T++ I PS E+ N R +SAKLR+ ++
Sbjct: 279 -----GRVITRKAILPSEMEQEENPRSKSAKLRIFER 310
>gi|263460310|sp|A4TBF6.2|RSMH_MYCGI RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
Length = 317
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/270 (41%), Positives = 148/270 (54%), Gaps = 22/270 (8%)
Query: 116 HIPVMLGEVLDVFSS--SRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAK 173
H+PV+L +++ + +R + VD TLGA GHS + P L+L IG+D DP AL
Sbjct: 7 HVPVLLDRCVELLAPALTREGATLVDATLGAGGHSERFLTDFPGLRL-IGLDRDPDALRI 65
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG---VDAILMDLGMSSM 230
A L FA +++ I + + + VDAIL DLG+SSM
Sbjct: 66 AGERLAP--------------FADRITLVRTRYDGIADAVRDAAGGSVDAILFDLGVSSM 111
Query: 231 QVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNK 290
Q++ ERGFS D PLDMRMD A L A +LNS+ + + RVLREYGEE +
Sbjct: 112 QLDRVERGFSYSTDAPLDMRMDSGADLTAAQVLNSYDERALARVLREYGEEKFAGRIAAF 171
Query: 291 IVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSL 350
IV+ R +TGELV+L+ P RR G A R FQALRI VN EL++L S++
Sbjct: 172 IVRRRAVTPFTTTGELVELLYDAIPAP-ARRTGG-HPAKRTFQALRIEVNAELESLRSAI 229
Query: 351 HACFDCLAPGGRLGVISFHSLEDRIVKQTF 380
A L P GRL V+++ SLEDRIVK F
Sbjct: 230 PAALQALRPHGRLAVMAYQSLEDRIVKTAF 259
>gi|427727931|ref|YP_007074168.1| S-adenosyl-methyltransferase MraW [Nostoc sp. PCC 7524]
gi|427363850|gb|AFY46571.1| S-adenosyl-methyltransferase MraW [Nostoc sp. PCC 7524]
Length = 299
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/344 (35%), Positives = 173/344 (50%), Gaps = 57/344 (16%)
Query: 109 IQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDP 168
I++ SH+PV+ EV+ + R +++D T+G GHS I+ A P+++L +D D
Sbjct: 11 IEEPTFSHLPVLPQEVITGLAV-RCGGNYLDATVGGGGHSRLILEAAPDVRL-TALDQDE 68
Query: 169 SALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMS 228
ALA A+ L F + I+S + + D IL DLG+S
Sbjct: 69 DALAAAQKELAE--------------FGERVTFIRSNFAAYE--FPTASFDGILADLGVS 112
Query: 229 SMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQ 288
S ++ PERGFS LDMRMD + + A D++N W + ++ + +YGEE +
Sbjct: 113 SYHLDTPERGFSFRHTASLDMRMDQRQPVTAADVINEWDEVDLADIFFKYGEERLSRRIA 172
Query: 289 NKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLES 348
+IV+ R +T EL + I P R G I ATRVFQALRI VNDELK+LE+
Sbjct: 173 RRIVEKR---PFTTTTELAEAIAFCVPP--KYRYGRIHPATRVFQALRIVVNDELKSLET 227
Query: 349 SLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE 408
L L PGG++ +ISFHSLEDR+VK + LRN
Sbjct: 228 FLEKAPHALVPGGKIAIISFHSLEDRLVKHS------------------LRN-------- 261
Query: 409 TWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
I+ K+LTK+PIT + E N R RSAKLR+ ++I
Sbjct: 262 ---SPIL-----KVLTKKPITATEAEIVNNPRSRSAKLRIGERI 297
>gi|121638047|ref|YP_978271.1| S-adenosyl-methyltransferase [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148661981|ref|YP_001283504.1| S-adenosyl-methyltransferase MraW [Mycobacterium tuberculosis
H37Ra]
gi|148823374|ref|YP_001288128.1| S-adenosyl-methyltransferase MraW [Mycobacterium tuberculosis F11]
gi|224990541|ref|YP_002645228.1| S-adenosyl-methyltransferase MraW [Mycobacterium bovis BCG str.
Tokyo 172]
gi|253798770|ref|YP_003031771.1| S-adenosyl-methyltransferase MraW [Mycobacterium tuberculosis KZN
1435]
gi|254364966|ref|ZP_04981012.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
Haarlem]
gi|289443672|ref|ZP_06433416.1| MraW methylase MraW [Mycobacterium tuberculosis T46]
gi|289447793|ref|ZP_06437537.1| S-adenosyl-methyltransferase MraW [Mycobacterium tuberculosis
CPHL_A]
gi|289570281|ref|ZP_06450508.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289574851|ref|ZP_06455078.1| S-adenosyl-methyltransferase MraW [Mycobacterium tuberculosis K85]
gi|289745439|ref|ZP_06504817.1| S-adenosyl-methyltransferase MraW [Mycobacterium tuberculosis
02_1987]
gi|289750761|ref|ZP_06510139.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289754275|ref|ZP_06513653.1| S-adenosyl-methyltransferase MraW [Mycobacterium tuberculosis
EAS054]
gi|289758287|ref|ZP_06517665.1| S-adenosyl-methyltransferase MraW [Mycobacterium tuberculosis T85]
gi|289762326|ref|ZP_06521704.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
gi|297731746|ref|ZP_06960864.1| S-adenosyl-methyltransferase MraW [Mycobacterium tuberculosis KZN
R506]
gi|298525659|ref|ZP_07013068.1| S-adenosyl-methyltransferase MraW [Mycobacterium tuberculosis
94_M4241A]
gi|306793634|ref|ZP_07431936.1| hypothetical protein TMEG_02533 [Mycobacterium tuberculosis
SUMu005]
gi|308375796|ref|ZP_07668118.1| hypothetical protein TMGG_00723 [Mycobacterium tuberculosis
SUMu007]
gi|308376929|ref|ZP_07668385.1| hypothetical protein TMHG_01355 [Mycobacterium tuberculosis
SUMu008]
gi|308377928|ref|ZP_07668626.1| hypothetical protein TMIG_00833 [Mycobacterium tuberculosis
SUMu009]
gi|308379135|ref|ZP_07668903.1| hypothetical protein TMJG_00427 [Mycobacterium tuberculosis
SUMu010]
gi|375296028|ref|YP_005100295.1| hypothetical protein TBSG_01827 [Mycobacterium tuberculosis KZN
4207]
gi|378771896|ref|YP_005171629.1| S-adenosyl-methyltransferase [Mycobacterium bovis BCG str. Mexico]
gi|383307970|ref|YP_005360781.1| 16S rRNA m(4)C1402 methyltransferase [Mycobacterium tuberculosis
RGTB327]
gi|392432237|ref|YP_006473281.1| hypothetical protein TBXG_001798 [Mycobacterium tuberculosis KZN
605]
gi|397674049|ref|YP_006515584.1| ribosomal RNA small subunit methyltransferase H [Mycobacterium
tuberculosis H37Rv]
gi|424804506|ref|ZP_18229937.1| hypothetical protein TBPG_01665 [Mycobacterium tuberculosis W-148]
gi|448824777|ref|NP_216681.4| Conserved protein [Mycobacterium tuberculosis H37Rv]
gi|449064223|ref|YP_007431306.1| S-adenosyl-methyltransferase MraW [Mycobacterium bovis BCG str.
Korea 1168P]
gi|31618937|emb|CAD97042.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
gi|121493695|emb|CAL72170.1| Conserved hypothetical protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|134150480|gb|EBA42525.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
Haarlem]
gi|148506133|gb|ABQ73942.1| S-adenosyl-methyltransferase [Mycobacterium tuberculosis H37Ra]
gi|148721901|gb|ABR06526.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
gi|224773654|dbj|BAH26460.1| S-adenosyl-methyltransferase [Mycobacterium bovis BCG str. Tokyo
172]
gi|253320273|gb|ACT24876.1| methylase MraW [Mycobacterium tuberculosis KZN 1435]
gi|289416591|gb|EFD13831.1| MraW methylase MraW [Mycobacterium tuberculosis T46]
gi|289420751|gb|EFD17952.1| S-adenosyl-methyltransferase MraW [Mycobacterium tuberculosis
CPHL_A]
gi|289539282|gb|EFD43860.1| S-adenosyl-methyltransferase MraW [Mycobacterium tuberculosis K85]
gi|289544035|gb|EFD47683.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289685967|gb|EFD53455.1| S-adenosyl-methyltransferase MraW [Mycobacterium tuberculosis
02_1987]
gi|289691348|gb|EFD58777.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289694862|gb|EFD62291.1| S-adenosyl-methyltransferase MraW [Mycobacterium tuberculosis
EAS054]
gi|289709832|gb|EFD73848.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
gi|289713851|gb|EFD77863.1| S-adenosyl-methyltransferase MraW [Mycobacterium tuberculosis T85]
gi|298495453|gb|EFI30747.1| S-adenosyl-methyltransferase MraW [Mycobacterium tuberculosis
94_M4241A]
gi|308337978|gb|EFP26829.1| hypothetical protein TMEG_02533 [Mycobacterium tuberculosis
SUMu005]
gi|308345155|gb|EFP34006.1| hypothetical protein TMGG_00723 [Mycobacterium tuberculosis
SUMu007]
gi|308349457|gb|EFP38308.1| hypothetical protein TMHG_01355 [Mycobacterium tuberculosis
SUMu008]
gi|308354088|gb|EFP42939.1| hypothetical protein TMIG_00833 [Mycobacterium tuberculosis
SUMu009]
gi|308358031|gb|EFP46882.1| hypothetical protein TMJG_00427 [Mycobacterium tuberculosis
SUMu010]
gi|326903782|gb|EGE50715.1| hypothetical protein TBPG_01665 [Mycobacterium tuberculosis W-148]
gi|328458533|gb|AEB03956.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
4207]
gi|341602085|emb|CCC64759.1| conserved hypothetical protein [Mycobacterium bovis BCG str. Moreau
RDJ]
gi|356594217|gb|AET19446.1| S-adenosyl-methyltransferase [Mycobacterium bovis BCG str. Mexico]
gi|380721923|gb|AFE17032.1| 16S rRNA m(4)C1402 methyltransferase [Mycobacterium tuberculosis
RGTB327]
gi|392053646|gb|AFM49204.1| hypothetical protein TBXG_001798 [Mycobacterium tuberculosis KZN
605]
gi|395138954|gb|AFN50113.1| ribosomal RNA small subunit methyltransferase H [Mycobacterium
tuberculosis H37Rv]
gi|440581642|emb|CCG12045.1| hypothetical protein MT7199_2197 [Mycobacterium tuberculosis
7199-99]
gi|444895682|emb|CCP44942.1| Conserved protein [Mycobacterium tuberculosis H37Rv]
gi|449032731|gb|AGE68158.1| S-adenosyl-methyltransferase MraW [Mycobacterium bovis BCG str.
Korea 1168P]
Length = 396
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/282 (38%), Positives = 151/282 (53%), Gaps = 30/282 (10%)
Query: 116 HIPVMLGEVLDVFSSSRT-------ITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDP 168
H+PV+ ++ + + T +D T+GA GH+ + P L+L IG+D DP
Sbjct: 65 HVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRL-IGLDRDP 123
Query: 169 SALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG------VDAIL 222
+AL AR+ L FA + + + + SG VD IL
Sbjct: 124 TALDVARSRLVR--------------FADRLTLVHTRYDCLGAALAESGYAAVGSVDGIL 169
Query: 223 MDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEES 282
DLG+SSMQ++ ERGF+ D PLDMRMDP L A DI+N++ +A + +LR YGEE
Sbjct: 170 FDLGVSSMQLDRAERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEER 229
Query: 283 NWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDE 342
+ IV+ R + ST ELV L+ P RR G A R FQALRIAVNDE
Sbjct: 230 FARRIAAGIVRRRAKTPFTSTAELVALLYQAIPAP-ARRVGG-HPAKRTFQALRIAVNDE 287
Query: 343 LKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSII 384
L++L +++ A D LA GGR+ V+++ SLEDRIVK+ F +
Sbjct: 288 LESLRTAVPAALDALAIGGRIAVLAYQSLEDRIVKRVFAEAV 329
>gi|119331204|ref|NP_001073250.1| probable methyltransferase-like protein 15 [Bos taurus]
gi|160012244|sp|A0JN95.1|MET15_BOVIN RecName: Full=Probable methyltransferase-like protein 15; AltName:
Full=Methyltransferase 5 domain-containing protein 1
gi|117306276|gb|AAI26576.1| Methyltransferase 5 domain containing 1 [Bos taurus]
gi|296479746|tpg|DAA21861.1| TPA: putative S-adenosyl-L-methionine-dependent methyltransferase
METT5D1 [Bos taurus]
Length = 407
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/353 (34%), Positives = 183/353 (51%), Gaps = 33/353 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HIPVM+ EV+ + + F+D T G+ GH+ AI++ P++ L+ +D DP+A A A
Sbjct: 72 HIPVMVDEVVRCLAPQKG-QVFLDMTFGSGGHTRAILQKEPDITLY-ALDRDPTAYAIAE 129
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGV-----DAILMDLGMSSM 230
L+ L + K R I Q + ++++GV D +L+DLG SSM
Sbjct: 130 -QLSEL-------------YPKQIRAILGQFSQAEALLMKAGVQPGTLDGVLLDLGCSSM 175
Query: 231 QVNNPERGFSVLGDGPLDMRMD----PQASLKAEDILNSWPDAEVGRVLREYGEESNWHL 286
Q++ PERGFS+ DGPLDMRMD P A D++N+ + +LR YGEE +
Sbjct: 176 QLDTPERGFSLRKDGPLDMRMDGDRYPDMP-TAADVVNALDQQALASILRAYGEEKHAKK 234
Query: 287 LQNKIVQARLRGGLHSTGELVDLIQSVTP--GMRGRR---QGWIKTATRVFQALRIAVND 341
+ + I+QAR + T +L ++ P + R+ Q AT+ FQA RI VN+
Sbjct: 235 IASAIIQARGLYPITRTQQLASIVAGAFPPSALYARKDLLQRPTHIATKTFQAFRIFVNN 294
Query: 342 ELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELR-- 399
EL L + L L PGG L +SFHSLEDRI+K+ L I R + ++ ++
Sbjct: 295 ELNELYTGLKTAQKFLRPGGHLVALSFHSLEDRIIKRFLLGISMTERFNLSARQKVIQKS 354
Query: 400 NIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ D N+ + K++ K+ +TP E+ + N R RSAKLR K+
Sbjct: 355 QLDSDQENKEGVSTGKAPLMWKLIHKKVLTPEDEDVQDNPRGRSAKLRAAIKL 407
>gi|332210617|ref|XP_003254406.1| PREDICTED: probable methyltransferase-like protein 15 [Nomascus
leucogenys]
Length = 407
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 128/371 (34%), Positives = 191/371 (51%), Gaps = 41/371 (11%)
Query: 100 NKDYDYESIIQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELK 159
++D D+E++ + HIPVM+ EV+ S R F+D T G+ GH+ A
Sbjct: 60 SQDRDFETMAK----LHIPVMVDEVVHCLSP-RKGQIFLDMTFGSGGHTKAXXXXXXXXX 114
Query: 160 LHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGV- 218
L+ +D DP+A A A HL+ L + K R + Q + ++++GV
Sbjct: 115 LY-ALDRDPTAYALAE-HLSEL-------------YPKQIRAMLGQFSQAEALLMKAGVQ 159
Query: 219 ----DAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMD----PQASLKAEDILNSWPDAE 270
D +LMDLG SSMQ++ PERGFS+ DGPLDMRMD P A D++N+
Sbjct: 160 PGTFDGVLMDLGCSSMQLDTPERGFSLRKDGPLDMRMDGGRYPDMP-TAADVVNALDQQA 218
Query: 271 VGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTP--GMRGRR---QGWI 325
+ +LR YGEE + + + IVQAR + T +L ++ P + R+ Q
Sbjct: 219 LASILRTYGEEKHAKKIASAIVQARSIYPITRTQQLASIVAGAFPPSAIYARKDLLQRST 278
Query: 326 KTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIID 385
AT+ FQALRI VN+EL L L L PGGRL +SFHSLEDRIVK+ L I
Sbjct: 279 HIATKTFQALRIFVNNELNELYMGLKTAQKFLRPGGRLVALSFHSLEDRIVKRFLLGISM 338
Query: 386 HNREDAEGNEEELRNIR----DDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRC 441
R + ++ ++ + +N E +R+ W +++ K+ ++P ++ + N R
Sbjct: 339 TERFNLSVRQQVMKTSQLGSDYENTEEVSVRRAPLMW--ELIHKKVLSPQDQDVQDNPRG 396
Query: 442 RSAKLRVIQKI 452
RSAKLR K+
Sbjct: 397 RSAKLRAAIKL 407
>gi|145223567|ref|YP_001134245.1| S-adenosyl-methyltransferase MraW [Mycobacterium gilvum PYR-GCK]
gi|145216053|gb|ABP45457.1| S-adenosyl-methyltransferase MraW [Mycobacterium gilvum PYR-GCK]
Length = 371
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 112/270 (41%), Positives = 148/270 (54%), Gaps = 22/270 (8%)
Query: 116 HIPVMLGEVLDVFSS--SRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAK 173
H+PV+L +++ + +R + VD TLGA GHS + P L+L IG+D DP AL
Sbjct: 61 HVPVLLDRCVELLAPALTREGATLVDATLGAGGHSERFLTDFPGLRL-IGLDRDPDALRI 119
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG---VDAILMDLGMSSM 230
A L FA +++ I + + + VDAIL DLG+SSM
Sbjct: 120 AGERLAP--------------FADRITLVRTRYDGIADAVRDAAGGSVDAILFDLGVSSM 165
Query: 231 QVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNK 290
Q++ ERGFS D PLDMRMD A L A +LNS+ + + RVLREYGEE +
Sbjct: 166 QLDRVERGFSYSTDAPLDMRMDSGADLTAAQVLNSYDERALARVLREYGEEKFAGRIAAF 225
Query: 291 IVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSL 350
IV+ R +TGELV+L+ P RR G A R FQALRI VN EL++L S++
Sbjct: 226 IVRRRAVTPFTTTGELVELLYDAIPAP-ARRTGG-HPAKRTFQALRIEVNAELESLRSAI 283
Query: 351 HACFDCLAPGGRLGVISFHSLEDRIVKQTF 380
A L P GRL V+++ SLEDRIVK F
Sbjct: 284 PAALQALRPHGRLAVMAYQSLEDRIVKTAF 313
>gi|333394749|ref|ZP_08476568.1| 16S rRNA m(4)C1402 methyltranserfase [Lactobacillus coryniformis
subsp. coryniformis KCTC 3167]
gi|420145221|ref|ZP_14652693.1| Ribosomal RNA small subunit methyltransferase H [Lactobacillus
coryniformis subsp. coryniformis CECT 5711]
gi|398403127|gb|EJN56396.1| Ribosomal RNA small subunit methyltransferase H [Lactobacillus
coryniformis subsp. coryniformis CECT 5711]
Length = 314
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 132/341 (38%), Positives = 171/341 (50%), Gaps = 38/341 (11%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + +VD TLG GHS ++ D D +A+ +
Sbjct: 4 HQTVLLNETVDSLQV-KPDGVYVDATLGGGGHSELLLSRLSSAGHLYAFDQDQTAIDNGK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQ--IDENILRSGVDAILMDLGMSSMQV 232
L QA TF K NFR + + L Q +D+ +D IL DLG+SS Q
Sbjct: 63 RRL------QAEVAAGKVTFIKANFRDLAAELAQRGVDQ------IDGILYDLGVSSPQF 110
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ RGFS D PLDMRMD L A I+N WP A++ R+L YGE+ + I
Sbjct: 111 DEAARGFSYKLDAPLDMRMDRTKPLTAHVIVNQWPYADLERILYRYGEDKFAKRVARAIE 170
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
+AR + +T +L ++I+S P R+ G A R FQALRIAVNDEL E+SL A
Sbjct: 171 RARAEAPIDTTLQLAEIIKSAIPAAARRKGGH--PAKRSFQALRIAVNDELGAEETSLEA 228
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNINETW 410
LA GGR+ VISFHSLEDRIVK + RE A E L + D E
Sbjct: 229 AISLLALGGRISVISFHSLEDRIVKTIY-------REHARVAEVPRGLPIVGDGEQPEL- 280
Query: 411 IRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
KI+TK+PI P+A E N R RSA+LRV +K
Sbjct: 281 ----------KIITKKPIEPTAAEVAENRRSRSAQLRVAEK 311
>gi|308232054|ref|ZP_07663988.1| hypothetical protein TMAG_00354 [Mycobacterium tuberculosis
SUMu001]
gi|308370931|ref|ZP_07667052.1| hypothetical protein TMCG_00261 [Mycobacterium tuberculosis
SUMu003]
gi|308372156|ref|ZP_07667311.1| hypothetical protein TMDG_00643 [Mycobacterium tuberculosis
SUMu004]
gi|308215154|gb|EFO74553.1| hypothetical protein TMAG_00354 [Mycobacterium tuberculosis
SUMu001]
gi|308330345|gb|EFP19196.1| hypothetical protein TMCG_00261 [Mycobacterium tuberculosis
SUMu003]
gi|308334178|gb|EFP23029.1| hypothetical protein TMDG_00643 [Mycobacterium tuberculosis
SUMu004]
Length = 405
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/282 (38%), Positives = 151/282 (53%), Gaps = 30/282 (10%)
Query: 116 HIPVMLGEVLDVFSSSRT-------ITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDP 168
H+PV+ ++ + + T +D T+GA GH+ + P L+L IG+D DP
Sbjct: 74 HVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRL-IGLDRDP 132
Query: 169 SALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG------VDAIL 222
+AL AR+ L FA + + + + SG VD IL
Sbjct: 133 TALDVARSRLVR--------------FADRLTLVHTRYDCLGAALAESGYAAVGSVDGIL 178
Query: 223 MDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEES 282
DLG+SSMQ++ ERGF+ D PLDMRMDP L A DI+N++ +A + +LR YGEE
Sbjct: 179 FDLGVSSMQLDRAERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEER 238
Query: 283 NWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDE 342
+ IV+ R + ST ELV L+ P RR G A R FQALRIAVNDE
Sbjct: 239 FARRIAAGIVRRRAKTPFTSTAELVALLYQAIPAP-ARRVGG-HPAKRTFQALRIAVNDE 296
Query: 343 LKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSII 384
L++L +++ A D LA GGR+ V+++ SLEDRIVK+ F +
Sbjct: 297 LESLRTAVPAALDALAIGGRIAVLAYQSLEDRIVKRVFAEAV 338
>gi|315443914|ref|YP_004076793.1| S-adenosyl-methyltransferase MraW [Mycobacterium gilvum Spyr1]
gi|315262217|gb|ADT98958.1| S-adenosyl-methyltransferase MraW [Mycobacterium gilvum Spyr1]
Length = 353
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 113/280 (40%), Positives = 150/280 (53%), Gaps = 22/280 (7%)
Query: 106 ESIIQQQQSSHIPVMLGEVLDVFSS--SRTITSFVDCTLGAAGHSSAIIRAHPELKLHIG 163
+S H+PV+L +++ + +R + VD TLGA GHS + P L+L IG
Sbjct: 33 QSAAMVDDQPHVPVLLDRCVELLAPALTREGATLVDATLGAGGHSERFLTDFPGLRL-IG 91
Query: 164 VDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG---VDA 220
+D DP AL A L FA +++ I + + + VDA
Sbjct: 92 LDRDPDALRIAGERLAP--------------FADRITLVRTRYDGIADAVRDAAGGSVDA 137
Query: 221 ILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGE 280
IL DLG+SSMQ++ ERGFS D PLDMRMD A L A +LNS+ + + RVLREYGE
Sbjct: 138 ILFDLGVSSMQLDRVERGFSYSTDAPLDMRMDSGADLTAAQVLNSYDERALARVLREYGE 197
Query: 281 ESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVN 340
E + IV+ R +TGELV+L+ P RR G A R FQALRI VN
Sbjct: 198 EKFAGRIAAFIVRRRAVTPFTTTGELVELLYDAIPAP-ARRTGG-HPAKRTFQALRIEVN 255
Query: 341 DELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTF 380
EL++L S++ A L P GRL V+++ SLEDRIVK F
Sbjct: 256 AELESLRSAIPAALQALRPHGRLAVMAYQSLEDRIVKTAF 295
>gi|168490031|ref|ZP_02714230.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae SP195]
gi|182683307|ref|YP_001835054.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae CGSP14]
gi|221231213|ref|YP_002510365.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae ATCC
700669]
gi|298230654|ref|ZP_06964335.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae str.
Canada MDR_19F]
gi|415696860|ref|ZP_11456502.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae 459-5]
gi|415748696|ref|ZP_11476748.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae SV35]
gi|415751422|ref|ZP_11478657.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae SV36]
gi|417678296|ref|ZP_12327696.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA17570]
gi|418122643|ref|ZP_12759578.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA44378]
gi|418127226|ref|ZP_12764124.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae NP170]
gi|418136391|ref|ZP_12773235.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA11663]
gi|418177373|ref|ZP_12813958.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA41565]
gi|418233551|ref|ZP_12860132.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA08780]
gi|419472431|ref|ZP_14012284.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA13430]
gi|419507422|ref|ZP_14047078.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA49542]
gi|421278124|ref|ZP_15728936.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA17301]
gi|421293369|ref|ZP_15744096.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA56113]
gi|262827179|sp|B8ZL51.1|RSMH_STRPJ RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|262827224|sp|B2ISQ2.1|RSMH_STRPS RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|182628641|gb|ACB89589.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae CGSP14]
gi|183571591|gb|EDT92119.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae SP195]
gi|220673673|emb|CAR68164.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae ATCC
700669]
gi|332075180|gb|EGI85650.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA17570]
gi|353798116|gb|EHD78446.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA44378]
gi|353801031|gb|EHD81339.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae NP170]
gi|353845815|gb|EHE25855.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA41565]
gi|353890135|gb|EHE69902.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA08780]
gi|353903449|gb|EHE78973.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA11663]
gi|379070409|gb|AFC91799.1| MraW [Streptococcus pneumoniae]
gi|379070411|gb|AFC91800.1| MraW [Streptococcus pneumoniae]
gi|379070413|gb|AFC91801.1| MraW [Streptococcus pneumoniae]
gi|379070415|gb|AFC91802.1| MraW [Streptococcus pneumoniae]
gi|379070417|gb|AFC91803.1| MraW [Streptococcus pneumoniae]
gi|379070419|gb|AFC91804.1| MraW [Streptococcus pneumoniae]
gi|379070421|gb|AFC91805.1| MraW [Streptococcus pneumoniae]
gi|379553333|gb|EHZ18417.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA13430]
gi|379613557|gb|EHZ78269.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA49542]
gi|381311027|gb|EIC51852.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae SV36]
gi|381318953|gb|EIC59670.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae SV35]
gi|381319953|gb|EIC60635.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae 459-5]
gi|395883243|gb|EJG94286.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA17301]
gi|395896423|gb|EJH07390.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA56113]
Length = 316
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 185/345 (53%), Gaps = 45/345 (13%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 7 HVTVLLHETIDMLDV-KPDGIYVDATLGGAGHSEYLLSKLSEKGHLYAFDQDQNAIDNAQ 65
Query: 176 AHLNSLLHGQAHPHLKTH--TFAK-NFRHIKSVLGQIDENILRSGV---DAILMDLGMSS 229
L P+++ TF K NFRH+++ L + +GV D I DLG+SS
Sbjct: 66 KRLA--------PYIEKGMVTFIKDNFRHLQARLRE-------TGVQEIDGICYDLGVSS 110
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
Q++ ERGFS D PLDMRM+ ASL A +++N++ ++ R+ +YGE+ +
Sbjct: 111 PQLDQRERGFSYKKDAPLDMRMNQDASLTAYEVVNNYDYHDLVRIFFKYGEDKFSKQIAR 170
Query: 290 KIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESS 349
KI QAR + +T EL ++I+ V P +++G A ++FQA+RI VNDEL + S
Sbjct: 171 KIEQAREVKPIETTTELAEIIKLVKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADES 228
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNIN 407
+ D LA GR+ VI+FHSLEDR+ KQ F ++A E + L I DD
Sbjct: 229 IQQAMDMLALDGRISVITFHSLEDRLTKQLF--------KEASTVEVPKGLPFIPDD--- 277
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++++++PI PSAEE N R SAKLRV++KI
Sbjct: 278 --------LKPKMELVSRKPILPSAEELEANNRSHSAKLRVVRKI 314
>gi|418215797|ref|ZP_12842522.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
Netherlands15B-37]
gi|353874175|gb|EHE54032.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
Netherlands15B-37]
Length = 316
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 185/345 (53%), Gaps = 45/345 (13%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 7 HVTVLLHETIDMLDV-KPDGIYVDATLGGAGHSEYLLSKLSEKGHLYAFDQDQNAIDNAQ 65
Query: 176 AHLNSLLHGQAHPHLKTH--TFAK-NFRHIKSVLGQIDENILRSGV---DAILMDLGMSS 229
L P+++ TF K NFRH+++ L + +GV D I DLG+SS
Sbjct: 66 KRLA--------PYIEKGMVTFIKDNFRHLQARLRE-------AGVQEIDGICYDLGVSS 110
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
Q++ ERGFS D PLDMRM+ ASL A +++N++ ++ R+ +YGE+ +
Sbjct: 111 PQLDQRERGFSYKKDAPLDMRMNQDASLTAYEVVNNYDYHDLVRIFFKYGEDKFSKQIAR 170
Query: 290 KIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESS 349
KI QAR + +T EL ++I+ V P +++G A ++FQA+RI VNDEL + S
Sbjct: 171 KIEQAREVKPIETTTELAEIIKLVKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADES 228
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNIN 407
+ D LA GR+ VI+FHSLEDR+ KQ F ++A E + L I DD
Sbjct: 229 IQQAMDMLALDGRISVITFHSLEDRLTKQLF--------KEASTVEVPKGLPFIPDD--- 277
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++++++PI PSAEE N R SAKLRV++KI
Sbjct: 278 --------LKPKMELVSRKPILPSAEELEANNRSHSAKLRVVRKI 314
>gi|414156978|ref|ZP_11413279.1| ribosomal RNA small subunit methyltransferase H [Streptococcus sp.
F0442]
gi|410869971|gb|EKS17931.1| ribosomal RNA small subunit methyltransferase H [Streptococcus sp.
F0442]
Length = 316
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 122/343 (35%), Positives = 179/343 (52%), Gaps = 33/343 (9%)
Query: 112 QQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
++ H+ V+L E +D+ + +VD TLG AGHS ++ E D D A+
Sbjct: 3 KEFHHVTVLLHETIDMLDV-KPDGIYVDATLGGAGHSEYLLTKLGESGHLYAFDQDQHAI 61
Query: 172 AKARAHLNSLLH-GQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSS 229
A+ L + G TF K NFRH+K L ++ + +D I DLG+SS
Sbjct: 62 ENAKIRLAPFIEKGMV-------TFIKDNFRHLKERLNELG----VTEIDGICYDLGVSS 110
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
Q++ ERGFS D PLDMRM+ +ASL A +++N++ ++ R+ +YGE+ +
Sbjct: 111 PQLDERERGFSYKKDAPLDMRMNQEASLTAYEVVNTYDYHDLVRIFFKYGEDKFSKQIAR 170
Query: 290 KIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESS 349
KI QAR + +T EL ++I+S P +++G A ++FQA+RI VNDEL + S
Sbjct: 171 KIEQARAIKPIETTTELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADES 228
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINET 409
+ D LA GR+ VI+FHSLEDR+ KQ F E +G L I DD
Sbjct: 229 IQQAMDLLALDGRISVITFHSLEDRLTKQLFKEA--STVEVPKG----LPFIPDD----- 277
Query: 410 WIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+++ ++PI PS EE N R SAKLRV +KI
Sbjct: 278 ------LKPKMELVNRKPILPSEEELEDNNRSHSAKLRVARKI 314
>gi|341821097|emb|CCC57433.1| ribosomal RNA small subunit methyltransferase H [Weissella
thailandensis fsh4-2]
Length = 314
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 122/337 (36%), Positives = 174/337 (51%), Gaps = 29/337 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D + +VD TLG GHS + KL D D +A+
Sbjct: 6 HVTVLLEEAIDGLNVQPD-GVYVDATLGGGGHSKLLASRLNHGKLW-SFDQDVTAIKYNE 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
HL L ++T NFRH+ L +++N+ SG+D I+ DLG+SS Q ++
Sbjct: 64 THLADELAANKVAFIQT-----NFRHLHDAL--VEQNV--SGIDGIVYDLGVSSPQFDDG 114
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
+RGFS D PLDMRMD +L A ++N W E+ R+ YGEE + KI + R
Sbjct: 115 QRGFSYKYDAPLDMRMDQSQALNARTVVNEWSFHELMRIFSRYGEEKFAKQIARKIERER 174
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +T +LV++I+ P R+ G A R FQA+RIAVNDEL +E SL +
Sbjct: 175 EIKPIETTFDLVNIIKEAIPAAARRKGG--HPAKRTFQAIRIAVNDELGAVEESLAQALE 232
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L GR+ VI+FHSLEDR+VK F +E I D I + +
Sbjct: 233 MLNVHGRIAVITFHSLEDRLVKTMF---------------KEKVTIPDLPSGLPVIPEEM 277
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
Q + K++ ++PI PS EE N R SAKLR+I++I
Sbjct: 278 QP-DFKLVVRKPILPSDEELATNRRAHSAKLRIIERI 313
>gi|433635234|ref|YP_007268861.1| Conserved protein of unknown function [Mycobacterium canettii CIPT
140070017]
gi|432166827|emb|CCK64330.1| Conserved protein of unknown function [Mycobacterium canettii CIPT
140070017]
Length = 344
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/282 (38%), Positives = 150/282 (53%), Gaps = 30/282 (10%)
Query: 116 HIPVMLGEVLDVFSSSRT-------ITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDP 168
H+PV+ ++ + + T +D T+GA GH+ + P L+L IG+D DP
Sbjct: 13 HVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRL-IGLDRDP 71
Query: 169 SALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG------VDAIL 222
+AL AR+ L FA + + + + SG VD IL
Sbjct: 72 TALDVARSRLVR--------------FADRLTLVHTRYDCLGAALAESGYAAVGSVDGIL 117
Query: 223 MDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEES 282
DLG+SSMQ++ ERGF+ D PLDMRMDP L A DI+N++ +A + +LR YGEE
Sbjct: 118 FDLGVSSMQLDRAERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEER 177
Query: 283 NWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDE 342
+ IV+ R + ST ELV L+ P RR G A R FQALRIAVNDE
Sbjct: 178 FARRIAAGIVRQRAKTPFTSTAELVALLYQAIPAP-ARRVGG-HPAKRTFQALRIAVNDE 235
Query: 343 LKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSII 384
L++L ++ A D LA GGR+ V+++ SLEDRIVK+ F +
Sbjct: 236 LESLRKAVPAALDALAIGGRIAVLAYQSLEDRIVKRVFAEAV 277
>gi|398786719|ref|ZP_10549330.1| 16S rRNA m(4)C1402 methyltransferase [Streptomyces auratus AGR0001]
gi|396993482|gb|EJJ04551.1| 16S rRNA m(4)C1402 methyltransferase [Streptomyces auratus AGR0001]
Length = 322
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/272 (38%), Positives = 151/272 (55%), Gaps = 22/272 (8%)
Query: 114 SSHIPVMLGEVLDVFSSS--RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
+ H+PVML LD+ + + VDCTLG GHS A++ P +L I +D DPSAL
Sbjct: 5 TRHVPVMLQRCLDMLAPALAEPGAVVVDCTLGLGGHSEALLATFPAARL-IALDRDPSAL 63
Query: 172 AKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG---VDAILMDLGMS 228
A L P+ + T + +V ++ E + R G V +L DLG+S
Sbjct: 64 KLAGERLA--------PYGERATL------VHAVYDELPEVLDRLGTPRVQGVLFDLGVS 109
Query: 229 SMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQ 288
SMQ++ +RGF+ D PLDMRMD + A ++LN++ E+ R+LR YGEE +
Sbjct: 110 SMQLDEADRGFAYAQDAPLDMRMDQTTGISAAEVLNTYAPGELVRILRSYGEEKQAKRIV 169
Query: 289 NKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLES 348
+V+ R + ++ LV+LI+ P R G A R FQALRI VN EL++++
Sbjct: 170 EAVVRERAKEPFTTSARLVELIRDALPQAAKRTGG--NPAKRTFQALRIEVNGELQSVQR 227
Query: 349 SLHACFDCLAPGGRLGVISFHSLEDRIVKQTF 380
++ A LA GGR+ V+S+HSLEDR+VKQ F
Sbjct: 228 AVPAAVKALAVGGRIAVLSYHSLEDRLVKQVF 259
>gi|379735643|ref|YP_005329149.1| S-adenosyl-dependent methyltransferase [Blastococcus saxobsidens
DD2]
gi|378783450|emb|CCG03118.1| S-adenosyl-dependent methyl transferase [Blastococcus saxobsidens
DD2]
Length = 325
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/270 (40%), Positives = 152/270 (56%), Gaps = 20/270 (7%)
Query: 116 HIPVMLGEVLDVFSSSRTITS--FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAK 173
H+ V+L V ++ + VD TLG AGH+ A++ AHP L++ +G+D DP A A+
Sbjct: 12 HVSVLLDRVTELLGPACATEGAVLVDATLGLAGHTLAMLAAHPGLRV-VGLDRDPDARAE 70
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVD---AILMDLGMSSM 230
A + + H A + +V ++ E + R G+D +L DLG+SS+
Sbjct: 71 AARRIEAAGH------------ADRVTVVPAVFDELPEVLDRLGIDEVHGVLFDLGVSSL 118
Query: 231 QVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNK 290
Q++ P+RGFS D PLDMRMDP A A D++N++ A++ RVLR YGEE +
Sbjct: 119 QLDRPDRGFSYSTDAPLDMRMDPGAPRTAADVVNTYAPADLARVLRVYGEERFASRIAAV 178
Query: 291 IVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSL 350
I + R R T L +L++ P RR G A R FQALRI VNDEL LE +L
Sbjct: 179 IQRERAREPFTRTARLAELVRESIPAAT-RRTGG-HPAKRTFQALRIEVNDELGALERAL 236
Query: 351 HACFDCLAPGGRLGVISFHSLEDRIVKQTF 380
A D LA GGR+ ++FHSLEDRIVKQT
Sbjct: 237 PAAIDALAVGGRVAALTFHSLEDRIVKQTL 266
>gi|313899190|ref|ZP_07832710.1| S-adenosyl-methyltransferase MraW [Clostridium sp. HGF2]
gi|312956013|gb|EFR37661.1| S-adenosyl-methyltransferase MraW [Clostridium sp. HGF2]
Length = 311
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 124/337 (36%), Positives = 174/337 (51%), Gaps = 30/337 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + + +VD TLG GHS+ I+ P+ L+ D D SA+ K+R
Sbjct: 4 HYSVLLHESIDNLAI-HSDGIYVDGTLGRGGHSAEILARIPQGHLY-AFDRDASAIEKSR 61
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L + H NF ++K L +G+D +++DLG+SS Q +
Sbjct: 62 ERLAQIGDNVTLIH-------SNFSNLKRELTARGV----TGIDGMVLDLGVSSPQFDEA 110
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
+RGFS D PLDMRMD L A ++N W E+ R+ ++GEES + KI +AR
Sbjct: 111 QRGFSYRFDAPLDMRMDQSQKLSAYQVVNEWEYQELVRIFFQFGEESFAKQIARKIEKAR 170
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +T LVD+I+S P ++G A +VFQA+RIAVNDEL L+ L +
Sbjct: 171 EVKPIETTFALVDVIKSALPAKVLNKKG--HPAKKVFQAIRIAVNDELGELQLVLRDALE 228
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L GGRL VISF SLEDRIVK TF S + D + Q +
Sbjct: 229 LLHVGGRLCVISFQSLEDRIVKDTFSSCSKPKQYDK---------------RIPILPQDM 273
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ ++L K+PIT + EE R N R SAKLR I++I
Sbjct: 274 EAAPYRLLNKKPITATEEELRENMRSHSAKLRCIERI 310
>gi|452911184|ref|ZP_21959855.1| rRNA small subunit methyltransferase H [Kocuria palustris PEL]
gi|452833610|gb|EME36420.1| rRNA small subunit methyltransferase H [Kocuria palustris PEL]
Length = 329
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 103/270 (38%), Positives = 154/270 (57%), Gaps = 22/270 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITS--FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAK 173
H+PV+L LD+ + + + +D TLG GHS AI+R P+++L +G+D DP AL
Sbjct: 12 HVPVLLEACLDLLAPALEGPAPVVIDATLGMGGHSEAILRRFPDVRL-VGIDRDPQALRL 70
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG---VDAILMDLGMSSM 230
A L +A F + + QI+ + ++G D IL DLG+SSM
Sbjct: 71 AGRRLEP--------------WADRFFPVHTTYDQIEPALAQAGFEAADGILFDLGVSSM 116
Query: 231 QVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNK 290
Q++ ERGF+ D PLDMRMD A L A DI+ + + ++ R+LR++GEE +
Sbjct: 117 QLDERERGFAYSYDAPLDMRMDSTAELTARDIVMEYSEQDLRRILRDWGEERFAQRIARG 176
Query: 291 IVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSL 350
IVQAR + L +TGELV+++++ P ++G A + FQALRI VN EL+ L ++
Sbjct: 177 IVQAREQRELTTTGELVEIVRAAKPAAALHKKG--HPAKQTFQALRIEVNQELEVLSRAV 234
Query: 351 HACFDCLAPGGRLGVISFHSLEDRIVKQTF 380
D L GGR+ +S+HSLED++VKQ
Sbjct: 235 PNALDALRLGGRVAAMSYHSLEDKMVKQEL 264
>gi|419492503|ref|ZP_14032231.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA47210]
gi|379596200|gb|EHZ61005.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA47210]
Length = 316
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 125/345 (36%), Positives = 183/345 (53%), Gaps = 45/345 (13%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +DV + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 7 HVTVLLHETIDVLDV-KPDGIYVDATLGGAGHSEYLLSKLSEKGHLYAFDQDQNAIDNAQ 65
Query: 176 AHLNSLLHGQAHPHLKTH--TFAK-NFRHIKSVLGQIDENILRSGV---DAILMDLGMSS 229
L P+++ TF K NFRH+++ L + +GV D I DLG+SS
Sbjct: 66 KRLA--------PYIEKGMVTFIKDNFRHLQARLRE-------AGVQEIDGICYDLGVSS 110
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
Q++ ERGFS D PLDMRM+ ASL A +++N + ++ R+ +YGE+ +
Sbjct: 111 PQLDQRERGFSYKKDAPLDMRMNQDASLTAYEVVNHYDYHDLVRIFFKYGEDKFSKQIAR 170
Query: 290 KIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESS 349
KI QAR + +T EL ++I+S P +++G A ++FQA+RI VNDEL + S
Sbjct: 171 KIEQAREVKPIETTTELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADES 228
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNIN 407
+ D LA GR+ VI+FHSLEDR+ KQ F ++A E + L I DD
Sbjct: 229 IQQAMDMLALDGRISVITFHSLEDRLTKQLF--------KEASTVEVPKGLPFIPDD--- 277
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++++++PI PSAEE N R SAKLRV +KI
Sbjct: 278 --------LKPKMELVSRKPILPSAEELEANNRSHSAKLRVARKI 314
>gi|334331625|ref|XP_001380257.2| PREDICTED: probable methyltransferase-like protein 15-like
[Monodelphis domestica]
Length = 550
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 126/354 (35%), Positives = 190/354 (53%), Gaps = 36/354 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HIPVM+ EV++ + R + +D T G+ GHS AI++ ++ L++ +D DP+A A A+
Sbjct: 216 HIPVMVNEVINCLAP-RQGQNILDMTFGSGGHSRAILQKELDVTLYV-LDRDPTAYAIAQ 273
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGV-----DAILMDLGMSSM 230
L+ L + K R + S Q + ++++GV D +L+DLG SSM
Sbjct: 274 -QLSEL-------------YPKQIRALLSQFSQAEAMLMKAGVQPGTVDGVLLDLGCSSM 319
Query: 231 QVNNPERGFSVLGDGPLDMRMD----PQASLKAEDILNSWPDAEVGRVLREYGEESNWHL 286
Q++ PERGFS DGPLDMRMD P A D++N+ + +LR YGEE
Sbjct: 320 QLDTPERGFSFRKDGPLDMRMDGGRYPDMH-TAADVVNALDQQALALILRTYGEEKYAKK 378
Query: 287 LQNKIVQARLRGGLHSTGELVDLIQSVTP--GMRGRR---QGWIKTATRVFQALRIAVND 341
+ + IVQAR + T +L ++ P + R+ Q AT+ FQALRI VN+
Sbjct: 379 IASAIVQARSIYPITRTQQLASIVAGAFPTAALYERKDLLQRSTHIATKTFQALRIFVNN 438
Query: 342 ELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEEL--- 398
EL L L L PGGRL +SFHSLEDRIVK+ FL ID + + +++
Sbjct: 439 ELNELYVGLKTAQKFLRPGGRLVALSFHSLEDRIVKR-FLHGIDVTEKLSPKKRQKIIQA 497
Query: 399 RNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+++ + NE + R +++ K+ +TP ++E + N R RSAKLR K+
Sbjct: 498 QSLCLNQENEEFFRS-SSPLEWEMIYKKVVTPESQEVQDNPRGRSAKLRAAIKL 550
>gi|419781699|ref|ZP_14307515.1| S-adenosyl-methyltransferase MraW [Streptococcus oralis SK610]
gi|383184007|gb|EIC76537.1| S-adenosyl-methyltransferase MraW [Streptococcus oralis SK610]
Length = 316
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 123/344 (35%), Positives = 184/344 (53%), Gaps = 43/344 (12%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 7 HVTVLLHETIDMLDV-KPDGIYVDATLGGAGHSEYLLSKLSEKGHLYAFDQDQNAIDNAQ 65
Query: 176 AHLNSLLHGQAHPHLKTH--TFAK-NFRHIKSVLGQ--IDENILRSGVDAILMDLGMSSM 230
L P+++ TF K NFRH+++ L + + E +D I DLG+SS
Sbjct: 66 KRLA--------PYIEKGMVTFIKDNFRHLQARLQEAGVQE------IDGICYDLGVSSP 111
Query: 231 QVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNK 290
Q++ ERGFS D PLDMRM+ +ASL A +++N + ++ R+ +YGE+ + K
Sbjct: 112 QLDQRERGFSYKKDAPLDMRMNQEASLTAYEVVNRYDYHDLVRIFFKYGEDKFSKQIARK 171
Query: 291 IVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSL 350
I QAR + +T EL ++I+S P +++G A ++FQA+RI VNDEL + S+
Sbjct: 172 IEQAREVKPIETTTELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADESI 229
Query: 351 HACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNINE 408
D LA GR+ VI+FHSLEDR+ KQ F ++A E + L I DD
Sbjct: 230 QQAMDMLALDGRISVITFHSLEDRLTKQLF--------KEASTVEVPKGLPFIPDD---- 277
Query: 409 TWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++++++PI PSAEE N R SAKLRV +KI
Sbjct: 278 -------LKPKMELVSRKPILPSAEELEANNRSHSAKLRVARKI 314
>gi|326779858|ref|ZP_08239123.1| Ribosomal RNA small subunit methyltransferase H [Streptomyces
griseus XylebKG-1]
gi|326660191|gb|EGE45037.1| Ribosomal RNA small subunit methyltransferase H [Streptomyces
griseus XylebKG-1]
Length = 321
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/276 (37%), Positives = 151/276 (54%), Gaps = 25/276 (9%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITS-----FVDCTLGAAGHSSAIIRAHPELKLHIGVDVD 167
Q+ H+PVML LD+ + + + VDCTLG GHS A++ + P +L I +D D
Sbjct: 3 QTRHVPVMLQRCLDLLAPALQDPAHPEPVVVDCTLGLGGHSEALLASFPAARL-IALDRD 61
Query: 168 PSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG---VDAILMD 224
AL L G+ + + + +V ++ E + R G V +L D
Sbjct: 62 KEALR---------LSGE-----RLAPYGDRATLVHAVYDELPEVLARLGIPKVQGVLFD 107
Query: 225 LGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNW 284
LG+SSMQ++ +RGF+ D PLDMRMD + A ++LN++P E+ R+LR YGEE
Sbjct: 108 LGVSSMQLDEADRGFAYAQDAPLDMRMDQSTGMGAAEVLNTYPPGELVRILRAYGEEKQA 167
Query: 285 HLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELK 344
+ + +V+ R + ++ LV+LI+ P R G A R FQALRI VN EL
Sbjct: 168 KRIVSAVVREREKEPFSNSARLVELIRDALPQAAKRTGG--NPAKRTFQALRIEVNGELS 225
Query: 345 TLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTF 380
LE ++ A D L GGR+ V+S+HSLEDR+VKQ F
Sbjct: 226 VLERAIPAAVDSLDVGGRIAVLSYHSLEDRLVKQVF 261
>gi|182439206|ref|YP_001826925.1| S-adenosyl-methyltransferase MraW [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|262826728|sp|B1W0I2.1|RSMH_STRGG RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|178467722|dbj|BAG22242.1| putative S-adenosylmethionine-dependent methyltransferase
[Streptomyces griseus subsp. griseus NBRC 13350]
Length = 321
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/276 (37%), Positives = 151/276 (54%), Gaps = 25/276 (9%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITS-----FVDCTLGAAGHSSAIIRAHPELKLHIGVDVD 167
Q+ H+PVML LD+ + + + VDCTLG GHS A++ + P +L I +D D
Sbjct: 3 QTRHVPVMLQRCLDLLAPALQDPAHPEPVVVDCTLGLGGHSEALLASFPTARL-IALDRD 61
Query: 168 PSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG---VDAILMD 224
AL L G+ + + + +V ++ E + R G V +L D
Sbjct: 62 KEALR---------LSGE-----RLAPYGDRATLVHAVYDELPEVLARLGIPKVQGVLFD 107
Query: 225 LGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNW 284
LG+SSMQ++ +RGF+ D PLDMRMD + A ++LN++P E+ R+LR YGEE
Sbjct: 108 LGVSSMQLDEADRGFAYAQDAPLDMRMDQSTGMGAAEVLNTYPPGELVRILRAYGEEKQA 167
Query: 285 HLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELK 344
+ + +V+ R + ++ LV+LI+ P R G A R FQALRI VN EL
Sbjct: 168 KRIVSAVVREREKEPFSNSARLVELIRDALPQAAKRTGG--NPAKRTFQALRIEVNGELS 225
Query: 345 TLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTF 380
LE ++ A D L GGR+ V+S+HSLEDR+VKQ F
Sbjct: 226 VLERAIPAAVDSLDVGGRIAVLSYHSLEDRLVKQVF 261
>gi|421276806|ref|ZP_15727626.1| S-adenosyl-methyltransferase MraW [Streptococcus mitis SPAR10]
gi|395876087|gb|EJG87163.1| S-adenosyl-methyltransferase MraW [Streptococcus mitis SPAR10]
Length = 316
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 122/342 (35%), Positives = 182/342 (53%), Gaps = 39/342 (11%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ VML E +D+ + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 7 HVTVMLHETIDMLDV-KPDGIYVDATLGGAGHSEYLLSKLSEKGHLYAFDQDQNAIDNAQ 65
Query: 176 AHLNSLLHGQAHPHLKTH--TFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
L P+++ TF K NFRH+K L ++ + +D I DLG+SS Q+
Sbjct: 66 KRLA--------PYIEKGMVTFIKDNFRHLKDRL----HDLGVTEIDGICYDLGVSSPQL 113
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ ERGFS D PLDMRM+ +ASL A +++N + ++ R+ +YGE+ + KI
Sbjct: 114 DQRERGFSYKKDAPLDMRMNQEASLTAYEVVNHYDYHDLVRIFFKYGEDKFSKQIARKIE 173
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
QAR + +T EL ++I+S P +++G A ++FQA+RI VNDEL + S+
Sbjct: 174 QARELKPIETTTELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADESIQQ 231
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNINETW 410
+ LA GR+ VI+FHSLEDR+ KQ F ++A E + L I DD
Sbjct: 232 AMELLAVDGRISVITFHSLEDRLTKQLF--------KEASTVEVPKGLPFIPDD------ 277
Query: 411 IRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++++++PI PS EE N R SAKLRV +KI
Sbjct: 278 -----LKPKMELVSRKPILPSKEELEANNRSHSAKLRVARKI 314
>gi|433642346|ref|YP_007288105.1| Conserved protein of unknown function [Mycobacterium canettii CIPT
140070008]
gi|432158894|emb|CCK56196.1| Conserved protein of unknown function [Mycobacterium canettii CIPT
140070008]
Length = 344
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/282 (38%), Positives = 150/282 (53%), Gaps = 30/282 (10%)
Query: 116 HIPVMLGEVLDVFSSSRT-------ITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDP 168
H+PV+ ++ + + T +D T+GA GH+ + P L+L IG+D DP
Sbjct: 13 HVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRL-IGLDRDP 71
Query: 169 SALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG------VDAIL 222
+AL AR+ L FA + + + + SG VD IL
Sbjct: 72 TALDVARSRLVR--------------FADRLTLVHTRYDCLGAALAESGYAAVGSVDGIL 117
Query: 223 MDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEES 282
DLG+SSMQ++ ERGF+ D PLDMRMDP L A DI+N++ +A + +LR YGEE
Sbjct: 118 FDLGVSSMQLDRAERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEER 177
Query: 283 NWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDE 342
+ IV+ R + ST ELV L+ P RR G A R FQALRIAVNDE
Sbjct: 178 FARRIAAGIVRRRAKTPFTSTAELVALLYQAIPAP-ARRVGG-HPAKRTFQALRIAVNDE 235
Query: 343 LKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSII 384
L++L ++ A D LA GGR+ V+++ SLEDRIVK+ F +
Sbjct: 236 LESLRKAVPAALDALAIGGRIAVLAYQSLEDRIVKRVFAEAV 277
>gi|67925208|ref|ZP_00518575.1| methyltransferase [Crocosphaera watsonii WH 8501]
gi|416408222|ref|ZP_11688372.1| methyltransferase [Crocosphaera watsonii WH 0003]
gi|67852944|gb|EAM48336.1| methyltransferase [Crocosphaera watsonii WH 8501]
gi|357260760|gb|EHJ10118.1| methyltransferase [Crocosphaera watsonii WH 0003]
Length = 292
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 120/336 (35%), Positives = 167/336 (49%), Gaps = 56/336 (16%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H PV+ +LD + ++D TLG GHS I+ P++++ G+D+D A+A +
Sbjct: 8 HTPVLPQALLDGLAIDPN-GHYLDATLGRGGHSRLILATFPDVRV-TGIDLDDEAIATTQ 65
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
+L+ L + + NF +G+ + I+ DLG+SS Q +
Sbjct: 66 GNLSELFGD------RLQVWQGNFADYSGKIGEFN---------GIIADLGVSSPQFDVA 110
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS PLDMRM+ Q SL A +I+N W + + +YGEE ++ +IVQ R
Sbjct: 111 ERGFSFRHQAPLDMRMNRQQSLTAAEIINHWDQTSLADLFYQYGEERRSRVIARRIVQQR 170
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+T L + I P + R G I ATRVFQALRIAVNDEL +LE L
Sbjct: 171 ---PFETTTALAEAIALCFPPKQ--RYGRIHPATRVFQALRIAVNDELGSLERFLEKAPH 225
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L PGGR+G+ISFHSLEDR VK +F RD + +
Sbjct: 226 WLKPGGRIGIISFHSLEDRRVKYSF---------------------RDSLLLD------- 257
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
++TK+PI P AEE+ N R RSAKLR Q+
Sbjct: 258 ------VVTKKPIIPQAEEQANNPRSRSAKLRFAQR 287
>gi|373124713|ref|ZP_09538553.1| S-adenosyl-methyltransferase MraW [Erysipelotrichaceae bacterium
21_3]
gi|422327867|ref|ZP_16408894.1| S-adenosyl-methyltransferase MraW [Erysipelotrichaceae bacterium
6_1_45]
gi|371658841|gb|EHO24115.1| S-adenosyl-methyltransferase MraW [Erysipelotrichaceae bacterium
21_3]
gi|371662137|gb|EHO27348.1| S-adenosyl-methyltransferase MraW [Erysipelotrichaceae bacterium
6_1_45]
Length = 311
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 123/337 (36%), Positives = 175/337 (51%), Gaps = 30/337 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + + +VD TLG GHS+ I+ P+ L+ D D SA+ ++R
Sbjct: 4 HYSVLLQESIDNLAI-HSDGIYVDGTLGRGGHSAEILARIPQGHLY-AFDRDASAIEESR 61
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L + + H NF ++K L +G+D +++DLG+SS Q +
Sbjct: 62 ERLAQIGNNVTLIH-------SNFSNLKRELTARGV----TGIDGMVLDLGVSSPQFDEA 110
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
+RGFS D PLDMRMD L A ++N W E+ R+ ++GEES + KI +AR
Sbjct: 111 QRGFSYRFDAPLDMRMDQSQKLSAYQVVNEWEYQELVRIFFQFGEESFAKQIARKIEKAR 170
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +T LVD+I+S P ++G A +VFQA+RIAVNDEL L+ L +
Sbjct: 171 EVKPIETTFALVDVIKSALPAKVLNKKG--HPAKKVFQAIRIAVNDELGELQLVLRDALE 228
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L GGRL VISF SLEDRIVK TF S + D + Q +
Sbjct: 229 LLHVGGRLCVISFQSLEDRIVKDTFASCSKPKQYDKRI---------------PILPQDM 273
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ ++L K+PIT + EE R N R SAKLR I++I
Sbjct: 274 EAAPYRLLNKKPITATEEELRENMRSHSAKLRCIERI 310
>gi|419817959|ref|ZP_14342085.1| 16S rRNA m(4)C1402 methyltransferase, partial [Streptococcus sp.
GMD4S]
gi|404465241|gb|EKA10717.1| 16S rRNA m(4)C1402 methyltransferase, partial [Streptococcus sp.
GMD4S]
Length = 317
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 184/345 (53%), Gaps = 45/345 (13%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 8 HVTVLLHETIDMLDV-KPDGIYVDATLGGAGHSEYLLSKLSEKGHLYAFDQDQNAIDNAQ 66
Query: 176 AHLNSLLHGQAHPHLKTH--TFAK-NFRHIKSVLGQIDENILRSGV---DAILMDLGMSS 229
L P+++ TF K NFRH+++ L + +GV D I DLG+SS
Sbjct: 67 KRLA--------PYIEKGMVTFIKDNFRHLQARLQE-------AGVQEIDGICYDLGVSS 111
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
Q++ ERGFS D PLDMRM+ +ASL A +++N + ++ R+ +YGE+ +
Sbjct: 112 PQLDQRERGFSYKKDAPLDMRMNQEASLTAYEVVNHYDYHDLVRIFFKYGEDKFSKQIAR 171
Query: 290 KIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESS 349
KI QAR + +T EL ++I+S P +++G A ++FQA+RI VNDEL + S
Sbjct: 172 KIEQAREVKPIETTTELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADES 229
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNIN 407
+ D LA GR+ VI+FHSLEDR+ KQ F ++A E + L I DD
Sbjct: 230 IQQAMDMLALDGRISVITFHSLEDRLTKQLF--------KEASTVEVPKGLPFIPDD--- 278
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++++++PI PSAEE N R SAKLRV +KI
Sbjct: 279 --------LKPKMELVSRKPILPSAEELEANNRSHSAKLRVARKI 315
>gi|418976679|ref|ZP_13524536.1| S-adenosyl-methyltransferase MraW [Streptococcus mitis SK575]
gi|383351092|gb|EID28920.1| S-adenosyl-methyltransferase MraW [Streptococcus mitis SK575]
Length = 316
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 123/344 (35%), Positives = 184/344 (53%), Gaps = 43/344 (12%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 7 HVTVLLHETIDMLDV-KPDGVYVDATLGGAGHSEYLLSKLSEKGHLYAFDQDQNAIDNAQ 65
Query: 176 AHLNSLLHGQAHPHLKTH--TFAK-NFRHIKSVLGQ--IDENILRSGVDAILMDLGMSSM 230
L P+++ TF K NFRH+++ L + + E +D I DLG+SS
Sbjct: 66 KRLA--------PYIEKGMVTFIKDNFRHLQARLREAGVQE------IDGICYDLGVSSP 111
Query: 231 QVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNK 290
Q++ ERGFS D PLDMRM+ +ASL A +++N + ++ R+ +YGE+ + K
Sbjct: 112 QLDQRERGFSYKKDAPLDMRMNQEASLTAYEVVNHYDYHDLVRIFFKYGEDKFSKQIARK 171
Query: 291 IVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSL 350
I QAR + +T EL ++I+S P +++G A ++FQA+RI VNDEL + S+
Sbjct: 172 IEQAREVKPIETTTELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADESI 229
Query: 351 HACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNINE 408
D LA GR+ VI+FHSLEDR+ KQ F ++A E + L I DD
Sbjct: 230 QQAMDMLALDGRISVITFHSLEDRLTKQLF--------KEASTVEVPKGLPFIPDD---- 277
Query: 409 TWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++++++PI PSAEE N R SAKLRV +KI
Sbjct: 278 -------LKPKMELVSRKPILPSAEELEANNRSHSAKLRVARKI 314
>gi|383831134|ref|ZP_09986223.1| S-adenosyl-methyltransferase MraW [Saccharomonospora xinjiangensis
XJ-54]
gi|383463787|gb|EID55877.1| S-adenosyl-methyltransferase MraW [Saccharomonospora xinjiangensis
XJ-54]
Length = 337
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 119/343 (34%), Positives = 171/343 (49%), Gaps = 39/343 (11%)
Query: 114 SSHIPVMLGEVLDVFSSSRT--ITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
++H+PV++ VL++F + +D TLG GH+ A++ A P L++ IG+D DP AL
Sbjct: 23 ATHLPVLVDRVLELFEPAVAGRDAVLIDATLGLGGHTDALLTAFPRLRV-IGLDRDPGAL 81
Query: 172 AKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAI---LMDLGMS 228
++R L + R + +V +I E + +G+D++ LMDLG+S
Sbjct: 82 ERSRQRLAG--------------YGDRVRFVHTVYHRIPEVLADAGLDSVEGVLMDLGVS 127
Query: 229 SMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQ 288
SMQ++ ERGF+ D PLDMRMDP A D+LN++ ++ R+LR+YGEE +
Sbjct: 128 SMQLDLDERGFAYARDAPLDMRMDPTTGPTAADVLNTYSLDDLTRILRDYGEEKFARRIA 187
Query: 289 NKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLES 348
+V R R ++ LV L+ P RR G A R FQALRI VN EL L
Sbjct: 188 KTVVAQRQRSPFETSEALVRLLYDAVPAP-SRRTGG-HPAKRTFQALRIEVNGELDILRE 245
Query: 349 SLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE 408
++ A L GGR+ V S+HSLEDRIVKQ + EG EL
Sbjct: 246 AVPAAIAALGEGGRIVVESYHSLEDRIVKQALATAA--TSRTPEGLPVELPG-------- 295
Query: 409 TWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
G ++LT+ E R N R S +LR +K
Sbjct: 296 -------HGPQLRLLTRGAEKADEAEIRRNPRAASVRLRAAEK 331
>gi|319947571|ref|ZP_08021801.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Streptococcus australis ATCC 700641]
gi|417919579|ref|ZP_12563108.1| S-adenosyl-methyltransferase MraW [Streptococcus australis ATCC
700641]
gi|319746259|gb|EFV98522.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Streptococcus australis ATCC 700641]
gi|342832346|gb|EGU66642.1| S-adenosyl-methyltransferase MraW [Streptococcus australis ATCC
700641]
Length = 316
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 119/340 (35%), Positives = 182/340 (53%), Gaps = 35/340 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG AGHS ++ E D D A+ A
Sbjct: 7 HVTVLLHETIDMLDV-KPDGIYVDATLGGAGHSEYLLSQLSEKGHLYAFDQDQHAIDNAE 65
Query: 176 AHLNSLLHGQAHPHLKTH--TFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
L P+++ TF K NFR++++ L ++ N +D I DLG+SS Q+
Sbjct: 66 KRLA--------PYVEKGMVTFIKDNFRNLQARLQELGVN----EIDGICYDLGVSSPQL 113
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ RGFS D PLDMRM+ +ASL A D++N++ ++ R+ +YGE+ + KI
Sbjct: 114 DERSRGFSYKKDAPLDMRMNQEASLTAYDVVNNYDYHDLVRIFFKYGEDKFSKQIARKIE 173
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
QAR + +T EL ++I+S P +++G A ++FQA+RI VNDEL + S+
Sbjct: 174 QARAVKPIETTTELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADESIQQ 231
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
D LA GGR+ VI+FHSLEDR+ KQ F E + E+ +I
Sbjct: 232 AMDLLAVGGRISVITFHSLEDRLTKQLF----------KEASTVEVPK------GLPFIP 275
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ ++ ++++++PI PS EE N R SAKLRV +KI
Sbjct: 276 EDLKP-KMELVSRKPILPSQEELEKNNRAHSAKLRVARKI 314
>gi|293364229|ref|ZP_06610955.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Streptococcus oralis ATCC 35037]
gi|307702416|ref|ZP_07639372.1| S-adenosyl-methyltransferase MraW [Streptococcus oralis ATCC 35037]
gi|401683973|ref|ZP_10815857.1| S-adenosyl-methyltransferase MraW [Streptococcus sp. BS35b]
gi|406576910|ref|ZP_11052533.1| 16S rRNA m(4)C1402 methyltransferase [Streptococcus sp. GMD6S]
gi|417793685|ref|ZP_12440957.1| S-adenosyl-methyltransferase MraW [Streptococcus oralis SK255]
gi|417915427|ref|ZP_12559040.1| S-adenosyl-methyltransferase MraW [Streptococcus mitis bv. 2 str.
SK95]
gi|418976002|ref|ZP_13523896.1| S-adenosyl-methyltransferase MraW [Streptococcus oralis SK1074]
gi|419778199|ref|ZP_14304095.1| S-adenosyl-methyltransferase MraW [Streptococcus oralis SK10]
gi|291317075|gb|EFE57502.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Streptococcus oralis ATCC 35037]
gi|307623998|gb|EFO02979.1| S-adenosyl-methyltransferase MraW [Streptococcus oralis ATCC 35037]
gi|334272340|gb|EGL90706.1| S-adenosyl-methyltransferase MraW [Streptococcus oralis SK255]
gi|342834413|gb|EGU68684.1| S-adenosyl-methyltransferase MraW [Streptococcus mitis bv. 2 str.
SK95]
gi|383187516|gb|EIC79966.1| S-adenosyl-methyltransferase MraW [Streptococcus oralis SK10]
gi|383346657|gb|EID24680.1| S-adenosyl-methyltransferase MraW [Streptococcus oralis SK1074]
gi|400186652|gb|EJO20860.1| S-adenosyl-methyltransferase MraW [Streptococcus sp. BS35b]
gi|404460591|gb|EKA06841.1| 16S rRNA m(4)C1402 methyltransferase [Streptococcus sp. GMD6S]
Length = 316
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 184/345 (53%), Gaps = 45/345 (13%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 7 HVTVLLHETIDMLDV-KPDGIYVDATLGGAGHSEYLLSKLSEKGHLYAFDQDQNAIDNAQ 65
Query: 176 AHLNSLLHGQAHPHLKTH--TFAK-NFRHIKSVLGQIDENILRSGV---DAILMDLGMSS 229
L P+++ TF K NFRH+++ L + +GV D I DLG+SS
Sbjct: 66 KRLA--------PYIEKGMVTFIKDNFRHLQARLQE-------AGVQEIDGICYDLGVSS 110
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
Q++ ERGFS D PLDMRM+ +ASL A +++N + ++ R+ +YGE+ +
Sbjct: 111 PQLDQRERGFSYKKDAPLDMRMNQEASLTAYEVVNHYDYHDLVRIFFKYGEDKFSKQIAR 170
Query: 290 KIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESS 349
KI QAR + +T EL ++I+S P +++G A ++FQA+RI VNDEL + S
Sbjct: 171 KIEQAREVKPIETTTELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADES 228
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNIN 407
+ D LA GR+ VI+FHSLEDR+ KQ F ++A E + L I DD
Sbjct: 229 IQQAMDMLALDGRISVITFHSLEDRLTKQLF--------KEASTVEVPKGLPFIPDD--- 277
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++++++PI PSAEE N R SAKLRV +KI
Sbjct: 278 --------LKPKMELVSRKPILPSAEELEANNRSHSAKLRVARKI 314
>gi|322391390|ref|ZP_08064860.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Streptococcus peroris ATCC 700780]
gi|321145816|gb|EFX41207.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Streptococcus peroris ATCC 700780]
Length = 316
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 123/342 (35%), Positives = 184/342 (53%), Gaps = 39/342 (11%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ VML E +D+ + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 7 HVTVMLHETIDMLDV-KPDGIYVDATLGGAGHSEYLLSKLSEKGHLYAFDQDQNAIDNAQ 65
Query: 176 AHLNSLLHGQAHPHLKTH--TFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
L P+++ TF K NFRH+K L ++ + +D I DLG+SS Q+
Sbjct: 66 KRLA--------PYIEKGMVTFIKDNFRHLKDRL----HDLGVTEIDGICYDLGVSSPQL 113
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ ERGFS D PLDMRM+ +ASL A +++N + ++ R+ +YGE+ + KI
Sbjct: 114 DQRERGFSYKKDAPLDMRMNQEASLTAYEVVNHYDYHDLVRIFFKYGEDKFSKQIARKIE 173
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
QAR + +T EL ++I+S P +++G A ++FQA+RI VNDEL + S+
Sbjct: 174 QARELKPIETTTELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADESIQQ 231
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNINETW 410
+ LA GR+ VI+FHSLEDR+ KQ F ++A E + L I DD
Sbjct: 232 AIELLALDGRISVITFHSLEDRLTKQLF--------KEASTVEVPKGLPFIPDD------ 277
Query: 411 IRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++ G +++++PI PS EE N R SAKLRV +KI
Sbjct: 278 ----LKPKMG-LVSRKPILPSKEELEANNRSHSAKLRVARKI 314
>gi|419441760|ref|ZP_13981795.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA13224]
gi|379555256|gb|EHZ20325.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA13224]
Length = 316
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 185/345 (53%), Gaps = 45/345 (13%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 7 HVTVLLHETIDMLDV-KPDGIYVDATLGGAGHSEYLLSKLSEKGHLYAFDQDQNAIDNAQ 65
Query: 176 AHLNSLLHGQAHPHLKTH--TFAK-NFRHIKSVLGQIDENILRSGV---DAILMDLGMSS 229
L P+++ TF K NFRH+++ L + +GV D I DLG+SS
Sbjct: 66 KRLA--------PYIEKGMVTFIKDNFRHLQARLRE-------AGVQEIDGICYDLGVSS 110
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
Q++ ERGFS D PLDMRM+ ASL A +++N++ ++ R+ +YGE+ +
Sbjct: 111 PQLDQRERGFSYKKDAPLDMRMNQDASLTAYEVVNNYDYHDLVRIFFKYGEDKFSKQIAR 170
Query: 290 KIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESS 349
KI QAR + +T EL ++I+ V P +++G A ++FQA+RI VNDEL + S
Sbjct: 171 KIEQAREVKPIETTTELAEIIKLVKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADES 228
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNIN 407
+ D LA GR+ VI+FHSLEDR+ KQ F ++A E + L I DD
Sbjct: 229 IQQAMDMLALDGRISVITFHSLEDRLTKQLF--------KEASTVEVPKGLPFIPDD--- 277
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ ++++++PI PSAEE N R SAKLRV +KI
Sbjct: 278 --------RKPKMELVSRKPILPSAEELEANNRSHSAKLRVARKI 314
>gi|172057976|ref|YP_001814436.1| S-adenosyl-methyltransferase MraW [Exiguobacterium sibiricum
255-15]
gi|263447041|sp|B1YIU3.1|RSMH_EXIS2 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|171990497|gb|ACB61419.1| S-adenosyl-methyltransferase MraW [Exiguobacterium sibiricum
255-15]
Length = 312
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 120/325 (36%), Positives = 166/325 (51%), Gaps = 48/325 (14%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
+VDCTLG AGHS I++ L+ D D ALA A L A +
Sbjct: 24 YVDCTLGGAGHSEEIVKQLTTGHLY-AFDQDDVALAHAAERL-------AAYEGRFTLIK 75
Query: 197 KNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQAS 256
NF H+K L E + VD IL DLG+SS Q++ ERGFS D LDMRMD +
Sbjct: 76 SNFVHLKEEL----EARSVTKVDGILFDLGVSSPQLDEGERGFSYNFDARLDMRMDQTSP 131
Query: 257 LKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPG 316
L A +++N WP ++ R+L YGEE + KI +AR + +T ELV+LI+ P
Sbjct: 132 LSAYEVVNEWPYNDLVRILFTYGEEKFSKQIARKIEKAREIAPIETTFELVELIKDAIPA 191
Query: 317 MRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIV 376
R+ G A R FQA+RIAVNDEL + +++ D LA GGRL VI+FHSLEDR+
Sbjct: 192 PARRKGG--HPAKRTFQAIRIAVNDELNVFDRAVYQAIDLLAVGGRLCVITFHSLEDRMC 249
Query: 377 KQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGW---------NGKILTKRP 427
KQ F ++ + ++ QG +++T++P
Sbjct: 250 KQAFK-------------------------EKSSLPELPQGLPMIPKEFEPELRLVTRKP 284
Query: 428 ITPSAEEERLNCRCRSAKLRVIQKI 452
IT +E N R RSAKLR+++K+
Sbjct: 285 ITAGDDELDDNRRSRSAKLRIVEKM 309
>gi|429212999|ref|ZP_19204164.1| S-adenosyl-methyltransferase MraW [Pseudomonas sp. M1]
gi|428157481|gb|EKX04029.1| S-adenosyl-methyltransferase MraW [Pseudomonas sp. M1]
Length = 313
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 130/343 (37%), Positives = 173/343 (50%), Gaps = 43/343 (12%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAII-RAHPELKLHIGVDVDPSALAKA 174
HI V+L E ++ + R +VD T G GHS A++ R P +L +G D DP A+A
Sbjct: 7 HITVLLEEAVEALAP-RAGGCYVDGTFGRGGHSRALLGRLDPGGRL-LGFDKDPQAIATG 64
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHI--KSVLGQIDENILRSGVDAILMDLGMSSMQV 232
+A L + +FA+ + + + GQ VD +L+DLG+SS Q+
Sbjct: 65 QA----LAAEDGRFVVVQRSFAEMGEELAARGLTGQ---------VDGVLLDLGVSSPQL 111
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
++PERGFS L DGPLDMRMDP + A + S + E+ RV +EYGEE + IV
Sbjct: 112 DDPERGFSFLNDGPLDMRMDPSRGVSAAQWIASAAEDEIARVFKEYGEERFAKRMARAIV 171
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIK---TATRVFQALRIAVNDELKTLESS 349
Q R T +L +I P W K ATR FQ LRI VN+EL LE
Sbjct: 172 QRRAEKPFVRTADLAAVITEANP-------AWEKGKNPATRAFQGLRIHVNNELGDLERG 224
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINET 409
L A + LA GGRL VISFHSLEDRIVKQ R+ A+G + L RD I
Sbjct: 225 LDAALEALAVGGRLVVISFHSLEDRIVKQFM-------RKHAKGEADNL--PRDLPIRAK 275
Query: 410 WIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++ L +P S E + N R RSA +RV +K+
Sbjct: 276 AFEPRLK------LLGKPQYASEAELKANPRSRSAVMRVAEKL 312
>gi|340627173|ref|YP_004745625.1| hypothetical protein MCAN_21891 [Mycobacterium canettii CIPT
140010059]
gi|340005363|emb|CCC44521.1| conserved hypothetical protein [Mycobacterium canettii CIPT
140010059]
Length = 396
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/282 (38%), Positives = 150/282 (53%), Gaps = 30/282 (10%)
Query: 116 HIPVMLGEVLDVFSSSRT-------ITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDP 168
H+PV+ ++ + + T +D T+GA GH+ + P L+L IG+D DP
Sbjct: 65 HVPVLAQRCFELLTPALTRYYPDGSQAVLLDATIGAGGHAERFLEGLPGLRL-IGLDRDP 123
Query: 169 SALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG------VDAIL 222
+AL AR+ L FA + + + + SG VD IL
Sbjct: 124 TALDVARSRLVR--------------FADRLTLVHTRYDCLGAALAESGYAAVGSVDGIL 169
Query: 223 MDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEES 282
DLG+SSMQ++ ERGF+ D PLDMRMDP L A DI+N++ +A + +LR YGEE
Sbjct: 170 FDLGVSSMQLDRAERGFAYATDAPLDMRMDPTTPLTAADIVNTYDEAALADILRRYGEER 229
Query: 283 NWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDE 342
+ IV+ R + ST ELV L+ P RR G A R FQALRIAVNDE
Sbjct: 230 FARRIAAGIVRRRAKTPFTSTAELVALLYQAIPAP-ARRVGG-HPAKRTFQALRIAVNDE 287
Query: 343 LKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSII 384
L++L ++ A D LA GGR+ V+++ SLEDRIVK+ F +
Sbjct: 288 LESLRKAVPAALDALAIGGRIAVLAYQSLEDRIVKRVFAEAV 329
>gi|385784659|ref|YP_005760832.1| MraW methylase family protein [Staphylococcus lugdunensis N920143]
gi|339894915|emb|CCB54217.1| MraW methylase family protein [Staphylococcus lugdunensis N920143]
Length = 311
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 120/335 (35%), Positives = 174/335 (51%), Gaps = 30/335 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ VML E +D + + + +VDCTLG AGH+ ++ + I +D D +A+ A+
Sbjct: 4 HVSVMLNETID-YLNIKPDGVYVDCTLGGAGHALYLLNQLNDEGHLIAIDQDTTAIDNAK 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L + LH H NFR + +L ++ NI VD I DLG+SS Q++ P
Sbjct: 63 EVLKAHLHKVTFVH-------NNFRELTHILKEL--NI--EKVDGIYYDLGVSSPQLDVP 111
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS D LDMRMD +L A +++N W + ++ YGEE + +I R
Sbjct: 112 ERGFSYHHDAKLDMRMDRTQTLSAYEVVNEWSYEALVKIFYRYGEEKFSKQIARRIEAHR 171
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +T +LVD+I+ P + RR+G A RVFQA+RIAVNDEL E S+ +
Sbjct: 172 ELQPIETTLQLVDVIKEGIPA-KARRKGG-HPAKRVFQAIRIAVNDELSAFEDSIEQAIE 229
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
+ GR+ VI+FHSLEDR+ KQ F E G L I E + ++
Sbjct: 230 LVKVNGRISVITFHSLEDRLCKQIF-----QEYEKGPGVPRGL-----PIIPEEYTPKL- 278
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
K + ++PIT + E+ N R RSAKLRV +
Sbjct: 279 -----KRVNRKPITATEEDLNQNNRARSAKLRVAE 308
>gi|449999121|ref|ZP_21824317.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans N29]
gi|449187265|gb|EMB89059.1| S-adenosyl-methyltransferase MraW [Streptococcus mutans N29]
Length = 316
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 122/339 (35%), Positives = 175/339 (51%), Gaps = 33/339 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HI V+L E +D+ + +VD TLG AGHS ++ + D D A+ A+
Sbjct: 7 HITVLLHETIDMLDI-KPDGIYVDATLGGAGHSECLLSKLGKEGHLYCFDQDQKAIDNAK 65
Query: 176 AHLNSLLH-GQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
L + GQ +F K NFRH+KS L DE I +D I DLG+SS Q++
Sbjct: 66 IRLQQYVKTGQV-------SFIKDNFRHLKSRLA--DEGIYE--IDGICYDLGVSSPQLD 114
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
ERGFS D PLDMRM+ A L A +++N++ ++ R+ +YGE+ + KI
Sbjct: 115 ERERGFSYKKDAPLDMRMNQDAQLTAFNVVNTYDYRDLVRLFFKYGEDKFSKQIARKIES 174
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
AR + +T EL ++I+S P +++G A ++FQA+RI VNDEL E SL
Sbjct: 175 ARKEKLIETTAELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAAEESLTQA 232
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
D LA GR+ VI+FHSLEDR+ KQ F + D ++ +
Sbjct: 233 LDLLALNGRIAVITFHSLEDRLTKQLFKEV----------------TTLDVPKGLPFVPE 276
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+Q ++ ++PI P+ E N R SAKLRVIQKI
Sbjct: 277 NLQP-KFSLVNRKPILPNVRELSENNRAHSAKLRVIQKI 314
>gi|419531609|ref|ZP_14071129.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA47794]
gi|379609935|gb|EHZ74672.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA47794]
Length = 316
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 123/343 (35%), Positives = 183/343 (53%), Gaps = 41/343 (11%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 7 HVTVLLHETIDMLDV-KPDGIYVDATLGGAGHSEYLLSKLSEKGHLYAFDQDQNAIDNAQ 65
Query: 176 AHLNSLLH-GQAHPHLKTHTFAK-NFRHIKSVLGQ--IDENILRSGVDAILMDLGMSSMQ 231
L S + G TF K NFRH+++ L + + E +D I DLG+SS Q
Sbjct: 66 KRLASYIEKGMV-------TFIKDNFRHLQTRLREAGVQE------IDGICYDLGVSSPQ 112
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ ERGFS D PLDMRM+ +ASL A +++N + ++ R+ +YGE+ + KI
Sbjct: 113 LDQRERGFSYKKDAPLDMRMNQEASLTAYEVVNHYDYHDLVRIFFKYGEDKFSKQIARKI 172
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
QAR + +T EL ++I+S P +++G A ++FQA+RI VNDEL + S+
Sbjct: 173 EQAREVKPIETTTELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADESIQ 230
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNINET 409
+ LA GR+ VI+FHSLEDR+ KQ F ++A E + L I DD
Sbjct: 231 QAMEMLALDGRISVITFHSLEDRLTKQLF--------KEASTVEVPKGLPFIPDD----- 277
Query: 410 WIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++++++PI PSAEE N R SAKLRV +KI
Sbjct: 278 ------LKPKMELVSRKPILPSAEELEANNRSHSAKLRVARKI 314
>gi|375089449|ref|ZP_09735775.1| S-adenosyl-methyltransferase MraW [Facklamia languida CCUG 37842]
gi|374566847|gb|EHR38081.1| S-adenosyl-methyltransferase MraW [Facklamia languida CCUG 37842]
Length = 315
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 117/339 (34%), Positives = 172/339 (50%), Gaps = 35/339 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + +VDCTLG AGH++ ++ + + +D D A+ +A+
Sbjct: 5 HETVLLKETIDGLDINPQ-GIYVDCTLGGAGHTAYLLDQLSDRGRVVAIDQDAFAIDQAK 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L A+ NFRH+ +L Q E I VD I DLG+SS Q++
Sbjct: 64 VSL-----ADAYQAGSVSFVQDNFRHLAKILDQ--EGI--PYVDGIYYDLGVSSPQLDQA 114
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS +G LDMRMD + L A +++NSW ++ R+L YGEE + KI + R
Sbjct: 115 ERGFSYHKEGRLDMRMDRRQDLDAYEVVNSWSYEDLVRILYRYGEEKFAKRIARKIEEER 174
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +T +L ++++S P R G A R FQA+R+AVNDEL +E S+ A
Sbjct: 175 AKEAIVTTTQLAEIVKSAIPAATRRTGG--HPAKRSFQAIRMAVNDELTAIEESVEAGLS 232
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L GGR+ VI+FHSLEDR++KQ F ET +
Sbjct: 233 RLKVGGRMAVITFHSLEDRLIKQIFRQY--------------------STPAETPPNLPV 272
Query: 416 QGWNG---KILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
G N +++ ++PI S E N R RSAKLR+I++
Sbjct: 273 MGNNQADYQLVNRKPIVASESELEENNRARSAKLRIIER 311
>gi|334882328|emb|CCB83326.1| ribosomal RNA small subunit methyltransferase H [Lactobacillus
pentosus MP-10]
Length = 319
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 126/342 (36%), Positives = 185/342 (54%), Gaps = 38/342 (11%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRA-HPELKLHIGVDVDPSALAKA 174
H V+L E + + R +VDCTLG GHS I++ P+ L+ D D +A+
Sbjct: 6 HTTVLLHEAIAALNV-RPDGIYVDCTLGGGGHSREILQQLGPDGHLY-SFDQDQTAIDYN 63
Query: 175 RAHLNSLLH-GQAHPHLKTHTFAKN-FRHIKSVLGQ--IDENILRSGVDAILMDLGMSSM 230
+++L L GQ TF KN F ++KS L + +D VD I+ DLG+SS
Sbjct: 64 QSNLAEYLERGQV-------TFIKNNFANLKSALAEQGVDH------VDGIVYDLGVSSP 110
Query: 231 QVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNK 290
Q ++ RGFS D PLDMRMD +L A+ ++N+WP A++ R+ YGEE +
Sbjct: 111 QFDDASRGFSYRYDAPLDMRMDQSQALTAKTVVNTWPYADLVRIFYRYGEEKFSKQVARM 170
Query: 291 IVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSL 350
I + R + +TG+LV++I++ P R RR G A RVFQA+RIAVN+EL LE+SL
Sbjct: 171 IERERAVQPIETTGQLVEIIKNAIPA-RARRTGG-HPAKRVFQAIRIAVNNELGVLETSL 228
Query: 351 HACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETW 410
D + GR+ VI+F SLEDR+VK F +E + +
Sbjct: 229 EQAVDLINVHGRVSVITFQSLEDRLVKTIF---------------KEHSALPELPPGLPV 273
Query: 411 IRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
I +Q + ++++++PI PSA+E N R SAKLR I++I
Sbjct: 274 IPAEMQP-DYQLVSRKPILPSADEIAANRRAHSAKLRAIERI 314
>gi|307708181|ref|ZP_07644648.1| S-adenosyl-methyltransferase MraW [Streptococcus mitis NCTC 12261]
gi|307615627|gb|EFN94833.1| S-adenosyl-methyltransferase MraW [Streptococcus mitis NCTC 12261]
Length = 316
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 123/344 (35%), Positives = 184/344 (53%), Gaps = 43/344 (12%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 7 HVTVLLHETIDMLDV-KPDGIYVDATLGGAGHSEYLLSKLSEKGHLYAFDQDQNAIDNAQ 65
Query: 176 AHLNSLLHGQAHPHLKTH--TFAK-NFRHIKSVLGQ--IDENILRSGVDAILMDLGMSSM 230
L P+++ TF K NFRH+++ L + + E +D I DLG+SS
Sbjct: 66 KRLA--------PYIEKGMVTFIKDNFRHLQARLREAGVQE------IDGICYDLGVSSP 111
Query: 231 QVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNK 290
Q++ ERGFS D PLDMRM+ +ASL A +++N + ++ R+ +YGE+ + K
Sbjct: 112 QLDQRERGFSYKKDAPLDMRMNQEASLTAYEVVNHYDYHDLVRIFFKYGEDKFSKQIARK 171
Query: 291 IVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSL 350
I QAR + +T EL ++I+S P +++G A ++FQA+RI VNDEL + S+
Sbjct: 172 IEQAREVKPIETTTELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADESI 229
Query: 351 HACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNINE 408
D LA GR+ VI+FHSLEDR+ KQ F ++A E + L I DD
Sbjct: 230 QQAMDMLALDGRISVITFHSLEDRLTKQLF--------KEASTVEVPKGLPFIPDD---- 277
Query: 409 TWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++++++PI PSAEE N R SAKLRV +KI
Sbjct: 278 -------LKPKMELVSRKPILPSAEELEANNRSHSAKLRVARKI 314
>gi|379010821|ref|YP_005268633.1| S-adenosyl-L-methionine-dependent methyltransferase MraW1
[Acetobacterium woodii DSM 1030]
gi|375301610|gb|AFA47744.1| S-adenosyl-L-methionine-dependent methyltransferase MraW1
[Acetobacterium woodii DSM 1030]
Length = 318
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 123/347 (35%), Positives = 181/347 (52%), Gaps = 36/347 (10%)
Query: 109 IQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDP 168
++ + SH V+L E +D + S+VDCTLG GHS I A E + +G+D D
Sbjct: 1 MKPETFSHTTVLLRESIDGLDI-KPDGSYVDCTLGGGGHSQWICEALNENGVLVGIDQDD 59
Query: 169 SALAKARAHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGM 227
AL A+ L P+ F K NF + VL E + SG+D IL DLG+
Sbjct: 60 YALRYAKNRL--------EPYACQRYFVKSNFASLTKVL----EGLHLSGIDGILYDLGV 107
Query: 228 SSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLL 287
SS Q+++ RGFS DGPLDMRM+ A L AE ++N + E+ ++L YGEE +
Sbjct: 108 SSFQLDDDTRGFSYHNDGPLDMRMNQVADLTAEMVVNDYAPGELKKILFLYGEEKFASQI 167
Query: 288 QNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLE 347
IV+AR + +T EL ++I+ P ++ + + FQA+R+ VN ELK LE
Sbjct: 168 VKSIVKAREIKRIQTTLELSEIIKHAYPPKERFKEKH--PSRKTFQAIRLEVNGELKILE 225
Query: 348 SSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNIN 407
+L L PGGR+ VI+FHSLEDR+VK+ F +E A +
Sbjct: 226 DALIQGIAALKPGGRMCVITFHSLEDRVVKRLF-------KERA-----------NPCTC 267
Query: 408 ETWIRQIIQGWNG--KILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
Q + G K+++++PI+ +E N R RSAKLR+++K+
Sbjct: 268 PPDFPQCVCGKKPEVKLISRKPISSGIDELEKNRRSRSAKLRIVEKL 314
>gi|357052495|ref|ZP_09113602.1| ribosomal RNA small subunit methyltransferase H 2 [Clostridium
clostridioforme 2_1_49FAA]
gi|355386682|gb|EHG33719.1| ribosomal RNA small subunit methyltransferase H 2 [Clostridium
clostridioforme 2_1_49FAA]
Length = 315
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 116/317 (36%), Positives = 165/317 (52%), Gaps = 34/317 (10%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
+VD TLG GH+ + + KL IG+D D A+ A L K
Sbjct: 28 YVDGTLGGGGHAYEVCKRLGSGKL-IGIDQDADAIEAAGKRLLPF-------QDKATIVR 79
Query: 197 KNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQAS 256
N+ +IK VL ++ GVD I +DLG+SS Q++ RGF+ D PLDMRMD +
Sbjct: 80 SNYANIKEVLKDLE----IEGVDGIYLDLGVSSYQLDTASRGFTYREDAPLDMRMDQRND 135
Query: 257 LKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPG 316
+ A I+N++ + E+ R++R+YGE++ + IV+AR + +TGEL ++I+ P
Sbjct: 136 VTAAHIINTYSEMELYRIIRDYGEDNFAKNIAKHIVRARGEHPIETTGELAEIIKGAIPA 195
Query: 317 MRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIV 376
R R G A R FQA+RI N EL+ LE S+ D L PGGRL +I+FHSLEDRIV
Sbjct: 196 -RVRATGG-HPAKRTFQAIRIECNHELEVLEQSIDTMIDLLNPGGRLSIITFHSLEDRIV 253
Query: 377 KQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGW--NGKILTKRPITPSAEE 434
K F R + I + G GK+++++PI PS EE
Sbjct: 254 KSRF------------------RLNENPCICPPDFPVCVCGRKSKGKVVSRKPILPSDEE 295
Query: 435 ERLNCRCRSAKLRVIQK 451
N R +SAKLRV ++
Sbjct: 296 LEENSRSKSAKLRVFER 312
>gi|313114876|ref|ZP_07800375.1| S-adenosyl-methyltransferase MraW [Faecalibacterium cf. prausnitzii
KLE1255]
gi|310622826|gb|EFQ06282.1| S-adenosyl-methyltransferase MraW [Faecalibacterium cf. prausnitzii
KLE1255]
Length = 321
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 128/341 (37%), Positives = 173/341 (50%), Gaps = 41/341 (12%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAI---IRAHPELKLHIGVDVDPSALA 172
HIPV+L E L+ S T ++D T G AGHS I + A +L I +D DP A+
Sbjct: 16 HIPVLLNECLEGLSIDPAGT-YLDGTAGGAGHSRQIALRLDAEKGGRL-ISLDQDPDAVQ 73
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
ARA L L NFR+ GQ E++ V+ L+DLG+SS Q+
Sbjct: 74 TARARLAGL---------PATVVQINFRYA----GQALESLGIDKVNGALLDLGVSSHQL 120
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
++ RGFS D PLDMRM Q A D++N+ E+ R+LR+YGEE + +IV
Sbjct: 121 DDAARGFSYRADAPLDMRMSQQGETAA-DLVNTESREELARILRDYGEEPFAWQIAGRIV 179
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
+AR + +T +L D++ S P R+ + R FQALRIAVN EL LE L
Sbjct: 180 EARENSPIETTLQLADIVASAMPPAERRKNK--NPSRRTFQALRIAVNHELDALEEGLDT 237
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
FD LAPGGRL VI+FHSLEDR+VK F R
Sbjct: 238 IFDHLAPGGRLCVITFHSLEDRLVKNKF------------------RRWSTACTCPPEFP 279
Query: 413 QIIQG--WNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ G K++T++PI +++E N R RSA LRV++K
Sbjct: 280 VCVCGGKAKAKLITRKPIEANSQELEENRRSRSAHLRVLEK 320
>gi|395239343|ref|ZP_10417223.1| Ribosomal RNA small subunit methyltransferase H [Lactobacillus
gigeriorum CRBIP 24.85]
gi|394476438|emb|CCI87200.1| Ribosomal RNA small subunit methyltransferase H [Lactobacillus
gigeriorum CRBIP 24.85]
Length = 315
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 118/337 (35%), Positives = 174/337 (51%), Gaps = 26/337 (7%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + +VD T G GH+ ++ L IG D D A+ A
Sbjct: 5 HTSVLLHETIDNLKP-KNDGLYVDATFGGGGHARYLLSKLQSGTL-IGFDQDEYAIQAAE 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
+ LL ++P LK NF H+K L ++ + G+D I DLG+SS Q +
Sbjct: 63 LNFADLLQNGSNPRLKL--VHDNFSHLKENLVELGYS---DGIDGIYYDLGVSSPQFDQA 117
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
+RGFS D LDMRMD L A I+N++ E+ ++L ++G+E + KIV+AR
Sbjct: 118 DRGFSYRFDARLDMRMDQSQELDAYKIVNTYDQKEIAKILFKFGDEKFSRQIARKIVEAR 177
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +T +LVD+I+ P RR G A + FQALR+AVN EL+ L++SL +
Sbjct: 178 SHQPIETTFQLVDIIKDAIPAY-ARRTGG-HPAKKSFQALRVAVNHELEVLQTSLEEAIE 235
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L PGGR+ VI+F S ED+IVK+ F ++ +E + +N+ T
Sbjct: 236 MLKPGGRISVITFQSDEDKIVKRIF-------KKYSEVEVPRGMPVIPENLKPTL----- 283
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
K++ ++PI S EE N R SAKLRV +KI
Sbjct: 284 -----KLVNRKPIIASTEELENNNRSHSAKLRVAEKI 315
>gi|418095431|ref|ZP_12732547.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA16531]
gi|418129512|ref|ZP_12766396.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA07643]
gi|419476999|ref|ZP_14016825.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA18068]
gi|353772211|gb|EHD52717.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA16531]
gi|353802804|gb|EHD83096.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA07643]
gi|379567798|gb|EHZ32781.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA18068]
Length = 316
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 184/345 (53%), Gaps = 45/345 (13%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 7 HVTVLLHETIDMLDV-KPDGIYVDATLGGAGHSEYLLSKLSEKGHLYAFDQDQNAIDNAQ 65
Query: 176 AHLNSLLHGQAHPHLK--THTFAK-NFRHIKSVLGQIDENILRSGV---DAILMDLGMSS 229
L P+++ TF K NFRH+++ L + +GV D I DLG+SS
Sbjct: 66 KRLA--------PYIEKGVVTFIKDNFRHLQARLRE-------AGVQEIDGICYDLGVSS 110
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
Q++ ERGFS D PLDMRM+ ASL A +++N + ++ R+ +YGE+ +
Sbjct: 111 PQLDQRERGFSYKKDAPLDMRMNQDASLTAYEVVNHYDYHDLVRIFFKYGEDKFSKQIAR 170
Query: 290 KIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESS 349
KI QAR + +T EL ++I+ V P +++G A ++FQA+RI VNDEL + S
Sbjct: 171 KIEQAREVKPIETTTELAEIIKLVKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADES 228
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNIN 407
+ D LA GR+ VI+FHSLEDR+ KQ F ++A E + L I DD
Sbjct: 229 IQQAMDMLALDGRISVITFHSLEDRLTKQLF--------KEASTVEVPKGLPFIPDD--- 277
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++++++PI PSAEE N R SAKLRV++KI
Sbjct: 278 --------LKPKMELVSRKPILPSAEELEANNRSHSAKLRVVRKI 314
>gi|417939661|ref|ZP_12582950.1| S-adenosyl-methyltransferase MraW [Streptococcus oralis SK313]
gi|343389856|gb|EGV02440.1| S-adenosyl-methyltransferase MraW [Streptococcus oralis SK313]
Length = 316
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 123/343 (35%), Positives = 182/343 (53%), Gaps = 41/343 (11%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 7 HVTVLLHETIDMLDV-KPDGIYVDATLGGAGHSEYLLSKLSEKGHLYAFDQDQNAIDNAQ 65
Query: 176 AHLNSLLH-GQAHPHLKTHTFAK-NFRHIKSVLGQ--IDENILRSGVDAILMDLGMSSMQ 231
L S + G TF K NFRH+++ L + + E +D I DLG+SS Q
Sbjct: 66 KRLASYIEKGMV-------TFIKDNFRHLQARLQEAGVQE------IDGICYDLGVSSPQ 112
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ ERGFS D PLDMRM+ +A L A +++N + ++ R+ +YGE+ + KI
Sbjct: 113 LDQRERGFSYKKDAPLDMRMNQEARLTAYEVVNHYDYHDLVRIFFKYGEDKFSKQIARKI 172
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
QAR + +T EL ++I+S P +++G A ++FQA+RI VNDEL + S+
Sbjct: 173 EQAREVKPIETTTELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADESIQ 230
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNINET 409
D LA GR+ VI+FHSLEDR+ KQ F ++A E + L I DD
Sbjct: 231 QAMDMLALDGRISVITFHSLEDRLTKQLF--------KEASTVEVPKGLPFIPDD----- 277
Query: 410 WIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++++++PI PSAEE N R SAKLRV +KI
Sbjct: 278 ------LKPKMELVSRKPILPSAEELEANNRSHSAKLRVARKI 314
>gi|328948458|ref|YP_004365795.1| ribosomal RNA small subunit methyltransferase H [Treponema
succinifaciens DSM 2489]
gi|328448782|gb|AEB14498.1| Ribosomal RNA small subunit methyltransferase H [Treponema
succinifaciens DSM 2489]
Length = 340
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 118/343 (34%), Positives = 165/343 (48%), Gaps = 40/343 (11%)
Query: 116 HIPVMLGEVLDVFSS----SRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
H PV+L E L S +D TLG GHS ++ P LK+ +G+D D
Sbjct: 18 HTPVLLNECLKFLSPIGEPFEKDAFMIDSTLGEGGHSFNFLKKFPTLKI-LGLDADSVIQ 76
Query: 172 AKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQ 231
A+A+ L+ + + F N+ + D IL DLG+S
Sbjct: 77 ARAKERLSEFGERMKFYNGWFNDFYCNYSEERKP-------------DLILFDLGISVFH 123
Query: 232 VNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
RGFS D LDMR++ A DI+N P+ E+ ++ Y +E + + I
Sbjct: 124 YEKSGRGFSFRHDEELDMRLNADTKESATDIVNEMPEDELANMIYLYSDEKYSRRIASAI 183
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
V AR + ST L D+I + P + G I ATR FQALRI VN ELK L ++H
Sbjct: 184 VSARKSQKIVSTKALADIIFNAVPS--KYKYGNIHPATRTFQALRILVNSELKRLPEAIH 241
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
A F+ LAPGG++GVI+FHSLEDRIVK F RN+ +
Sbjct: 242 AAFNVLAPGGKIGVITFHSLEDRIVKNYF------------------RNLGKQCVCPREF 283
Query: 412 RQIIQGWN--GKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ + G +ILT++P+ PS EE + N RSAKLRV++K+
Sbjct: 284 PECVCGGTPCAEILTRKPVEPSEEEIKANSPSRSAKLRVVRKL 326
>gi|116670123|ref|YP_831056.1| S-adenosyl-methyltransferase MraW [Arthrobacter sp. FB24]
gi|263447796|sp|A0JV86.1|RSMH_ARTS2 RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|116610232|gb|ABK02956.1| S-adenosyl-methyltransferase MraW [Arthrobacter sp. FB24]
Length = 332
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 127/349 (36%), Positives = 185/349 (53%), Gaps = 48/349 (13%)
Query: 116 HIPVMLGEVLDVFSS------SRTITSFV-DCTLGAAGHSSAIIRAHPELKLHIGVDVDP 168
H+PV+ +++ + R T V D TLG GHS A+++ P+L L IG+D D
Sbjct: 14 HVPVLKDRCINLLAPGIEAARQRGETPVVIDATLGMGGHSEALLQRFPDLHL-IGIDRDE 72
Query: 169 SALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILR----SGVDAILMD 224
ALA A L FA + +V +I ++LR S V +LMD
Sbjct: 73 EALALAGERLKP--------------FADRTDLVHAVYDEI-PDVLRDLGVSEVHGVLMD 117
Query: 225 LGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNW 284
LG+SS+Q++ ERGF+ D PLDMRMD A D++N++ + ++ R++R++GEE
Sbjct: 118 LGVSSLQLDERERGFAYSFDAPLDMRMDTSRGQTAADVVNNYSEEDLVRIIRKWGEEKFA 177
Query: 285 HLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELK 344
+ N+IV AR +TGELVD I++V P + G A R FQALRI VN+EL
Sbjct: 178 GRIANRIVAAREAKPFATTGELVDTIRAVVPAGAAKTGGH--PAKRTFQALRIEVNEELD 235
Query: 345 TLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAE-GNEEELRNIRD 403
LE ++ A D LA GGR+ V+S+HSLED+IVK+ F + ++ A G EL +
Sbjct: 236 VLERAVPAAVDALAMGGRVVVMSYHSLEDKIVKKVFQT---GSKSSAPLGFPVELEEHKP 292
Query: 404 DNINETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ K LTK P+A+E N R SA+LR +++I
Sbjct: 293 EL---------------KTLTKGTEVPTADEIAENPRAASARLRAVERI 326
>gi|113478175|ref|YP_724236.1| S-adenosyl-methyltransferase MraW [Trichodesmium erythraeum IMS101]
gi|123351672|sp|Q10VG1.1|RSMH_TRIEI RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|110169223|gb|ABG53763.1| S-adenosyl-methyltransferase MraW [Trichodesmium erythraeum IMS101]
Length = 283
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 119/338 (35%), Positives = 172/338 (50%), Gaps = 57/338 (16%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
+HIPV+ E++ R ++D TLG GH+ I+ A PE+K+ + +D D AL +
Sbjct: 2 NHIPVLSSELISGLVI-RPRGLYLDATLGFGGHTKLILAAAPEVKV-VAIDQDKQALDSS 59
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
+ L S + N + S D L+ D IL DLG++S+Q++
Sbjct: 60 QTLLAS--------------YNSNIQFCHSNFADYDPQNLK--FDGILADLGINSVQLDT 103
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
PERGFS G LDMRM+ Q ++ A I+N W + ++ + YGEE + KI+++
Sbjct: 104 PERGFSFRHQGKLDMRMNQQQTITAAKIINHWEEVKLANIFYTYGEERLSRRIARKIIES 163
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R L +T EL +++ + P R G I ATRVFQALRI VN EL LE+ L
Sbjct: 164 R---PLETTTELAEVVANCVP--YKYRYGRIHPATRVFQALRIEVNQELSRLETFLKNAP 218
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
L GGR+G+ISFHSLEDR+VK + +R+ +I
Sbjct: 219 HWLKIGGRIGIISFHSLEDRLVKHS---------------------LRNASI-------- 249
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
K+LTK+PI P E +N R RSAKLR+ +K+
Sbjct: 250 -----LKVLTKKPIQPQDNEVAINPRARSAKLRLAEKL 282
>gi|329766778|ref|ZP_08258308.1| ribosomal RNA small subunit methyltransferase H [Gemella
haemolysans M341]
gi|328839289|gb|EGF88871.1| ribosomal RNA small subunit methyltransferase H [Gemella
haemolysans M341]
Length = 311
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 118/322 (36%), Positives = 162/322 (50%), Gaps = 46/322 (14%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
+VDCTLG AGHS I++ KL+ D D AL A+ L ++
Sbjct: 24 YVDCTLGGAGHSLEILKQLKNGKLY-AFDQDNIALENAKNKLAE--------------YS 68
Query: 197 KNFRHIKSVLGQIDENILRSGV---DAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDP 253
IKS + E + GV D +L DLG+SS Q++ PERGFS D LDMRMD
Sbjct: 69 DKVVFIKSNFVNLKEKLAEHGVHEVDGVLYDLGVSSPQLDTPERGFSYNYDTKLDMRMDT 128
Query: 254 QASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSV 313
A + A +++N + ++ ++ YGEE+ + I + R + + +T ELV++I+
Sbjct: 129 DAKISAYEVVNEYSYHDLVKIFYRYGEENFSKQIARNIEKKREQKPIETTFELVEIIKES 188
Query: 314 TPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLED 373
P + R G A RVFQA+RIAVN+EL E SL D + GGR+ VI+FHSLED
Sbjct: 189 IPAAKRRTGGH--PAKRVFQAIRIAVNNELSVFEDSLEQAIDIVKVGGRISVITFHSLED 246
Query: 374 RIVKQTFLSIIDHNREDAEGN-----EEELRNIRDDNINETWIRQIIQGWNGKILTKRPI 428
RI KQ F S +D N EE L + K++T++PI
Sbjct: 247 RICKQIFNSYA--KAKDIPKNLPIMPEESLSKL-------------------KVITRKPI 285
Query: 429 TPSAEEERLNCRCRSAKLRVIQ 450
PS E N R RSAKLRV +
Sbjct: 286 YPSDIELEENNRSRSAKLRVAE 307
>gi|418104398|ref|ZP_12741458.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA44500]
gi|418124957|ref|ZP_12761878.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA44511]
gi|418190800|ref|ZP_12827305.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA47388]
gi|418213535|ref|ZP_12840270.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA54644]
gi|419483598|ref|ZP_14023374.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA43257]
gi|421300051|ref|ZP_15750723.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA19998]
gi|353778832|gb|EHD59298.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA44500]
gi|353800522|gb|EHD80832.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA44511]
gi|353858399|gb|EHE38359.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA47388]
gi|353870818|gb|EHE50689.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA54644]
gi|379583109|gb|EHZ47986.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA43257]
gi|395901148|gb|EJH12085.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA19998]
Length = 316
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 183/345 (53%), Gaps = 45/345 (13%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 7 HVTVLLHETIDMLDV-KPDGIYVDATLGGAGHSEYLLSKLSEKGHLYAFDQDQNAIDNAQ 65
Query: 176 AHLNSLLHGQAHPHLKTH--TFAK-NFRHIKSVLGQIDENILRSGV---DAILMDLGMSS 229
L P+++ TF K NFRH+++ L + +GV D I DLG+SS
Sbjct: 66 KRLA--------PYIEKGMVTFIKDNFRHLQACLRE-------AGVQEIDGICYDLGVSS 110
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
Q++ ERGFS D PLDMRM+ ASL A +++N + ++ R+ +YGE+ +
Sbjct: 111 PQLDQRERGFSYKKDAPLDMRMNQDASLTAYEVVNHYDYHDLVRIFFKYGEDKFSKQIAR 170
Query: 290 KIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESS 349
KI QAR + +T EL ++I+S P +++G A ++FQA+RI VNDEL + S
Sbjct: 171 KIEQAREVKPIETTTELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADES 228
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNIN 407
+ D LA GR+ VI+FHSLEDR+ KQ F ++A E + L I DD
Sbjct: 229 IQQAMDMLALDGRISVITFHSLEDRLTKQLF--------KEASTVEVPKGLPFIPDD--- 277
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++++++PI PSAEE N R SAKLRV +KI
Sbjct: 278 --------LKPKMELVSRKPILPSAEELEANNRSHSAKLRVARKI 314
>gi|302550804|ref|ZP_07303146.1| MraW methylase [Streptomyces viridochromogenes DSM 40736]
gi|302468422|gb|EFL31515.1| MraW methylase [Streptomyces viridochromogenes DSM 40736]
Length = 318
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 106/273 (38%), Positives = 150/273 (54%), Gaps = 22/273 (8%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITS--FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSA 170
QS H+PVML LD+ + + VDCTLG GHS A++ PE +L + +D D A
Sbjct: 3 QSRHVPVMLQRCLDLLAPALEGPGPVVVDCTLGLGGHSEALLERFPEARL-VALDRDKEA 61
Query: 171 LAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG---VDAILMDLGM 227
L A L P+ + T + +V ++ E + + G V +L DLG+
Sbjct: 62 LRLAGERLA--------PYGERATL------VHAVYDELPEVLDKLGIRRVQGVLFDLGV 107
Query: 228 SSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLL 287
SSMQ++ +RGF+ D PLDMRMD + A ++LN++P E+ R+LR YGEE +
Sbjct: 108 SSMQLDEADRGFAYAQDAPLDMRMDQTTGVSAAEVLNTYPPGELVRILRAYGEEKQAKRI 167
Query: 288 QNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLE 347
IV+ R + ++ LV+LI+ P R G A R FQALRI VN EL LE
Sbjct: 168 VAAIVREREKEPFSNSARLVELIRDALPQAAKRTGG--NPAKRTFQALRIEVNGELAVLE 225
Query: 348 SSLHACFDCLAPGGRLGVISFHSLEDRIVKQTF 380
++ A + L GGR+ V+S+HSLEDR+VKQ F
Sbjct: 226 RAVPAAVEALDVGGRIAVLSYHSLEDRLVKQVF 258
>gi|337283476|ref|YP_004622947.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Streptococcus parasanguinis ATCC 15912]
gi|335371069|gb|AEH57019.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Streptococcus parasanguinis ATCC 15912]
Length = 316
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 122/345 (35%), Positives = 181/345 (52%), Gaps = 37/345 (10%)
Query: 112 QQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
++ H+ V+L E +D+ + +VD TLG AGHS ++ E D D A+
Sbjct: 3 KEFHHVTVLLHETIDMLDV-KPDGIYVDATLGGAGHSEYLLTKLNESGHLYAFDQDQHAI 61
Query: 172 AKARAHLNSLLH-GQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSS 229
A+ L + G TF K NFRH+K L +I + ++ I DLG+SS
Sbjct: 62 ENAKIRLAPFIEKGMV-------TFIKDNFRHLKERLN----DIGVTEINGICYDLGVSS 110
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
Q++ ERGFS D PLDMRM+ +ASL A +++N++ ++ R+ +YGE+ +
Sbjct: 111 PQLDERERGFSYKKDAPLDMRMNQEASLTAYEVVNTYDYHDLVRIFFKYGEDKFSKQIAR 170
Query: 290 KIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESS 349
KI QAR + +T EL ++I+S P +++G A ++FQA+RI VNDEL + S
Sbjct: 171 KIEQARAIKPIETTTELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADES 228
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNIN 407
+ D LA GR+ VI+FHSLEDR+ KQ F ++A E + L I DD
Sbjct: 229 IQQAMDLLALDGRISVITFHSLEDRLTKQLF--------KEASTVEVPKGLPFIPDD--- 277
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+++ ++PI PS EE N R SAKLRV +KI
Sbjct: 278 --------LKPKMELINRKPILPSEEELEENNRSHSAKLRVARKI 314
>gi|307718580|ref|YP_003874112.1| S-adenosyl-methyltransferase MraW [Spirochaeta thermophila DSM
6192]
gi|306532305|gb|ADN01839.1| S-adenosyl-methyltransferase MraW [Spirochaeta thermophila DSM
6192]
Length = 324
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 119/338 (35%), Positives = 172/338 (50%), Gaps = 36/338 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+PV+ EV S + VD TLG GHS A++ + P +++ +GVD DP L++A
Sbjct: 8 HVPVLREEVGAFLSVREGLV--VDATLGEGGHSEALLESRPGIRI-LGVDADPIMLSRAG 64
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVD-AILMDLGMSSMQVNN 234
L+ F R ++ ++ E+ ILMDLG+SS +
Sbjct: 65 ERLSR--------------FGDRVRLVQGWFDEVLESFPAEDRPVGILMDLGISSYHLEK 110
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
RGFS L PLDMR+ P +KA D++N++ + E+ + +GEE + IV
Sbjct: 111 SGRGFSFLRREPLDMRLSPYLPMKASDVVNTYSETELVDIFSRFGEEPFSKRIARAIVSE 170
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + + ++ L +++ P R+G I ATRVFQALRI VN EL+ +E ++ A
Sbjct: 171 RRKMPITTSDHLAEVVMKAVPPKA--RRGRIHPATRVFQALRIVVNKELERVERAVRAGV 228
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
LAPGGR+ VISFHSLEDRIVK+ F E E R
Sbjct: 229 RLLAPGGRMAVISFHSLEDRIVKRLFRFYAGACTCPPE---------------EPICRCG 273
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
QG ++LTK+P+ P EE R N RSA+LRV++K+
Sbjct: 274 GQGIV-EVLTKKPVRPGEEEVRANPASRSARLRVLEKV 310
>gi|134102314|ref|YP_001107975.1| S-adenosyl-methyltransferase MraW [Saccharopolyspora erythraea NRRL
2338]
gi|291003724|ref|ZP_06561697.1| S-adenosyl-methyltransferase [Saccharopolyspora erythraea NRRL
2338]
gi|262826346|sp|A4FLX5.1|RSMH_SACEN RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|133914937|emb|CAM05050.1| S-adenosyl-methyltransferase [Saccharopolyspora erythraea NRRL
2338]
Length = 330
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 112/268 (41%), Positives = 148/268 (55%), Gaps = 18/268 (6%)
Query: 116 HIPVMLGEVLDVFSS--SRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAK 173
H+PVM+ L++ + S+ VD TLG GHS A++ AHPEL L +G+D DP AL
Sbjct: 19 HVPVMMERTLELLAPALSKGPAVVVDATLGMGGHSEALLAAHPELTL-VGLDRDPDALRL 77
Query: 174 ARAHLNSLLHGQAHPHL-KTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
A L PH + H + L + S VD L DLG+SS+Q+
Sbjct: 78 AGERLA--------PHSDRVHLVHAVYDEWAEALAGLS----LSKVDGALFDLGVSSLQL 125
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ +RGF+ D PLDMRMD A A D+LN++ E+ RVLREYGEE + IV
Sbjct: 126 DETDRGFAYAHDAPLDMRMDSGAPRTAADVLNTYSAGELTRVLREYGEEKFAARIAAAIV 185
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
+ R + +G LV+L+ P RR G A R FQALRI VN EL+ L +L A
Sbjct: 186 RERAKAPFDRSGRLVELLYDAVPAA-SRRTGG-HPAKRTFQALRIEVNAELEVLGRALPA 243
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTF 380
D LA GGR+ V+S+HSLEDR+VK+ F
Sbjct: 244 ALDSLAVGGRMVVMSYHSLEDRMVKRAF 271
>gi|210634276|ref|ZP_03298049.1| hypothetical protein COLSTE_01971 [Collinsella stercoris DSM 13279]
gi|210158878|gb|EEA89849.1| S-adenosyl-methyltransferase MraW [Collinsella stercoris DSM 13279]
Length = 306
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 130/337 (38%), Positives = 178/337 (52%), Gaps = 35/337 (10%)
Query: 120 MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLN 179
ML EVL+ S + DCTLG AGHS + L +G+D D AL A L+
Sbjct: 1 MLQEVLEQLQLSAGSVA-CDCTLGGAGHSVRMAAQVGTEGLLLGIDQDDMALEAAGKRLD 59
Query: 180 SLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRS---GVDAILMDLGMSSMQVNNPE 236
+ G H LK NF G +DE + + GVD L DLG+SS Q++ P
Sbjct: 60 AEAPGTPHKLLK-----GNF-------GDLDELLCSAQVPGVDGFLFDLGVSSPQLDIPG 107
Query: 237 RGFSVLGDGPLDMRMDPQA-SLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
RGFS D PLDMRMDP +L A ++LN++ +A++ R+LR YGEE + +IV+ R
Sbjct: 108 RGFSYNEDAPLDMRMDPGTNTLNAAEVLNTYTEADLARILRIYGEEKFARQIAREIVRRR 167
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
L +TG+ VD+I++ P RR G A R FQA+RI VN EL LE L A
Sbjct: 168 QVAPLATTGDFVDVIKAGIPAA-ARRHGG-HPAKRSFQAIRIEVNHELDVLERGLEAAVR 225
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L P GR+ VIS+HSLEDRIVK+ F +E ++G D + I+
Sbjct: 226 WLNPSGRVCVISYHSLEDRIVKRLF-------QELSQG----CTCPPDIPVCVCGNVPIV 274
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
K+ T++P+ +AEE N R RSAK+R +++
Sbjct: 275 -----KVTTRKPLVATAEEVARNPRARSAKIRCAERL 306
>gi|87161763|ref|YP_493770.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|88194885|ref|YP_499685.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|253731798|ref|ZP_04865963.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus USA300_TCH959]
gi|384547421|ref|YP_005736674.1| S-adenosyl-methyltransferase [Staphylococcus aureus subsp. aureus
ED133]
gi|384861773|ref|YP_005744493.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|418897716|ref|ZP_13451786.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIGC341D]
gi|418906113|ref|ZP_13460140.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIGC345D]
gi|418931244|ref|ZP_13485086.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIG1750]
gi|418988000|ref|ZP_13535673.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIG1835]
gi|422743431|ref|ZP_16797415.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus MRSA177]
gi|422745591|ref|ZP_16799530.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus MRSA131]
gi|424768633|ref|ZP_18195897.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CM05]
gi|87127737|gb|ABD22251.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|87202443|gb|ABD30253.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|253724469|gb|EES93198.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus USA300_TCH959]
gi|298694470|gb|ADI97692.1| S-adenosyl-methyltransferase [Staphylococcus aureus subsp. aureus
ED133]
gi|302751002|gb|ADL65179.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|320141006|gb|EFW32853.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus MRSA131]
gi|320143062|gb|EFW34852.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus MRSA177]
gi|377715077|gb|EHT39274.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIG1750]
gi|377719788|gb|EHT43958.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIG1835]
gi|377760751|gb|EHT84627.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIGC341D]
gi|377765413|gb|EHT89263.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIGC345D]
gi|402348524|gb|EJU83510.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CM05]
Length = 304
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 121/331 (36%), Positives = 171/331 (51%), Gaps = 30/331 (9%)
Query: 120 MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLN 179
ML E +D + ++DCTLG AGH+ ++ + I +D D +A+ A+ L
Sbjct: 1 MLNETIDYLNVKEN-GVYIDCTLGGAGHALYLLNQLNDDGRLIAIDQDQTAIDNAKEVLK 59
Query: 180 SLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGF 239
LH H NFR + +L D NI VD I DLG+SS Q++ PERGF
Sbjct: 60 DHLHKVTFVH-------SNFRELTQILK--DLNI--EKVDGIYYDLGVSSPQLDIPERGF 108
Query: 240 SVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGG 299
S D LDMRMD L A +I+N+W + ++ YGEE + +I R +
Sbjct: 109 SYHHDATLDMRMDQTQELTAYEIVNNWSYEALVKIFYRYGEEKFSKQIARRIEAHREQQP 168
Query: 300 LHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAP 359
+ +T ELVD+I+ P + RR+G A RVFQALRIAVNDEL E S+ + +
Sbjct: 169 ITTTLELVDIIKEGIPA-KARRKGG-HPAKRVFQALRIAVNDELSAFEDSIEQAIELVKV 226
Query: 360 GGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWN 419
GR+ VI+FHSLEDR+ KQ F ++ E E R + I E + ++
Sbjct: 227 DGRISVITFHSLEDRLCKQVF--------QEYEKGPEVPRGL--PVIPEAYTPKL----- 271
Query: 420 GKILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
K + ++PIT + E+ N R RSAKLRV +
Sbjct: 272 -KRVNRKPITATEEDLDDNNRARSAKLRVAE 301
>gi|334119513|ref|ZP_08493599.1| Ribosomal RNA small subunit methyltransferase H [Microcoleus
vaginatus FGP-2]
gi|333458301|gb|EGK86920.1| Ribosomal RNA small subunit methyltransferase H [Microcoleus
vaginatus FGP-2]
Length = 300
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 123/343 (35%), Positives = 171/343 (49%), Gaps = 67/343 (19%)
Query: 114 SSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAK 173
+ H+PV LG+ L + R ++D TLG GH+S I+ A P++ + + +D D A+
Sbjct: 20 TYHVPV-LGQELIAGLAVRPGGHYLDATLGGGGHTSLILAAAPDVTV-VAIDRDEQAIRF 77
Query: 174 ARAHLNS----LLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSS 229
+A + HG NF +S + D I+ DLG+SS
Sbjct: 78 CQARFANSPVEFWHG-------------NFADYQSSEAEFD---------GIIADLGVSS 115
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
Q + PERGFS LDMRM+ Q SL AE+I+N W + ++ ++ +YGEE +
Sbjct: 116 AQFDTPERGFSFRHPAQLDMRMNQQQSLTAEEIINHWEEVKLADIIYKYGEERLSRRIAR 175
Query: 290 KIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESS 349
+IVQ R +T EL I S P +R G I ATR FQALRIAVN EL +LE+
Sbjct: 176 RIVQGR---PFQTTTELAGAIASSFPPK--QRNGRIHPATRTFQALRIAVNSELASLETF 230
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINET 409
LH L PGGR+G+I+FHSLEDR VK +LR
Sbjct: 231 LHQAPGWLKPGGRIGIITFHSLEDRPVKH------------------QLRGTP------- 265
Query: 410 WIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
N ++LTK+PI P +EE N R RSAKLR+ +++
Sbjct: 266 ---------NLQVLTKKPIGPQSEEVARNPRSRSAKLRLAERL 299
>gi|315918163|ref|ZP_07914403.1| S-adenosyl-methyltransferase mraW [Fusobacterium gonidiaformans
ATCC 25563]
gi|313692038|gb|EFS28873.1| S-adenosyl-methyltransferase mraW [Fusobacterium gonidiaformans
ATCC 25563]
Length = 318
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 117/341 (34%), Positives = 176/341 (51%), Gaps = 41/341 (12%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HIPV+ E LD + ++DCTLG HS I++ E I +D D +A+A +
Sbjct: 14 HIPVLYEETLDQLVWNPD-GIYIDCTLGGGSHSEGILKRLSEKGRLISIDQDANAIAFCK 72
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIK--SVLGQIDENILRSGVDAILMDLGMSSMQVN 233
L HG+ + F NF +I S L +D+ VD ILMD+G+SS Q++
Sbjct: 73 KRLEK--HGK-----QWSVFQNNFENIDIVSYLAGVDK------VDGILMDIGVSSTQLD 119
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
+ ERGFS D LDMRM+ + L A +++N++ + ++ R+L EYGEE + + + I +
Sbjct: 120 DGERGFSYRYDAKLDMRMNKEQDLSAYEVVNTYAEQDLVRILFEYGEERHAKKIASFICE 179
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
R + +TGELV +I+ + A + FQA+RI VN EL+ LE ++
Sbjct: 180 NRKEKPIETTGELVAIIKRAYSERASKH-----PAKKTFQAIRIEVNRELEVLEKAIQKS 234
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
D L P G L +I+FHSLEDR+VK F + + E +
Sbjct: 235 VDLLKPKGHLAIITFHSLEDRLVKTVFKDLATACKCPPE------------------LPV 276
Query: 414 IIQGWNG--KILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ G KILTK+PI PS +E N R S+KLRV++++
Sbjct: 277 CVCGGKAKVKILTKKPIIPSEDELGKNNRAHSSKLRVVERL 317
>gi|406905003|gb|EKD46598.1| Ribosomal RNA small subunit methyltransferase H [uncultured
bacterium]
Length = 315
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 125/338 (36%), Positives = 172/338 (50%), Gaps = 29/338 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + + VD TLG GHS +++ E I D D A+ + R
Sbjct: 4 HKTVLLKETVDALNLKPGMI-VVDATLGGGGHSLEVLKKIGEKGKLIVFDRDLDAIDRFR 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
+ + + ++ F N+ +K L I NI S VDAIL DLG+SS Q+ +
Sbjct: 63 KRIETGRVAVSDENI--FLFHDNYSTLKDSLASI--NI--SSVDAILADLGISSDQLADE 116
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
RG S GD PLDMRMD + A D++N++ ++ R+ +E+G+E H + IV R
Sbjct: 117 FRGISFQGDAPLDMRMDLTRGITAADVVNTYSQQDLMRIFKEFGDEQYAHSIARNIVSQR 176
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
T ELV+LI+ PGM R++ + AT+ FQALRI VN ELKTLE L +
Sbjct: 177 EEKLFSRTSELVELIERSVPGMYKRKK--LHPATKTFQALRIEVNQELKTLEMFLFQAVE 234
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEG--NEEELRNIRDDNINETWIRQ 413
L PGGRL VI+FHS ED +VK RE+A G E R +
Sbjct: 235 VLRPGGRLAVITFHSGEDALVKHAL-------RENARGCICPPEFPVCRCQKLPLV---- 283
Query: 414 IIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
++T+ PI PS EE N R RSAKLR+ +K
Sbjct: 284 -------NLITRSPIAPSEEEIIENPRSRSAKLRIAEK 314
>gi|331701055|ref|YP_004398014.1| ribosomal RNA small subunit methyltransferase H [Lactobacillus
buchneri NRRL B-30929]
gi|329128398|gb|AEB72951.1| Ribosomal RNA small subunit methyltransferase H [Lactobacillus
buchneri NRRL B-30929]
Length = 315
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 122/337 (36%), Positives = 171/337 (50%), Gaps = 29/337 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E + + + T +VD TLG GH++ I+ L+ D D A+A R
Sbjct: 6 HVTVLLNEAVKGLNINPDGT-YVDATLGGGGHTTKILEQLTNGHLY-SFDQDEEAIAYNR 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
HL + K NFRH+KS L +D SG+D I+ DLG+SS Q +
Sbjct: 64 QHLAEYIEAG-----KLTLIHDNFRHLKSALQNVD----VSGIDGIVYDLGVSSPQFDEA 114
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
RGFS D LDMRMD + A I+N WP ++ R+ YGEE + +I R
Sbjct: 115 GRGFSYRFDARLDMRMDQDNPIDAWKIVNEWPYEKLVRIFYRYGEEKFAKSIARRIETVR 174
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +T +LV++I+ P RR G A +VFQA+RIAVNDEL LE SL D
Sbjct: 175 REHPIDTTNDLVEVIKEGIPAA-ARRHGG-HPAKKVFQAVRIAVNDELSALEDSLEQALD 232
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L GR+ VI+F SLEDR+VK F +E ++ + N I + I
Sbjct: 233 LLNVNGRISVITFQSLEDRLVKTMF---------------KEKTSLPELPPNLPIIPEGI 277
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ K +T++PI P+ E N R SAKLR+I++I
Sbjct: 278 KP-KFKSITRKPIVPTEAELEENHRSHSAKLRIIERI 313
>gi|50842237|ref|YP_055464.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
KPA171202]
gi|387503133|ref|YP_005944362.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes 6609]
gi|422455878|ref|ZP_16532547.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL030PA1]
gi|54036174|sp|Q6A9R0.1|RSMH_PROAC RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|50839839|gb|AAT82506.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
KPA171202]
gi|315107070|gb|EFT79046.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL030PA1]
gi|335277178|gb|AEH29083.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes 6609]
Length = 337
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 125/346 (36%), Positives = 174/346 (50%), Gaps = 46/346 (13%)
Query: 116 HIPVMLGEVLD----VFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
HIPVM +LD V S R + VD TLG GH+ A++R P+++L +G+D D AL
Sbjct: 14 HIPVMRARILDLLAVVLKSGRRV--HVDGTLGMGGHAEAVLRRFPDVEL-VGIDRDQQAL 70
Query: 172 AKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG---VDAILMDLGMS 228
A A L FA + +V ++ E + G VD++L+DLG+S
Sbjct: 71 TMAEARLEP--------------FADRVHLVHAVHDELPEVLDDLGLDYVDSVLLDLGLS 116
Query: 229 SMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQ 288
S Q++ ERGFS D PLDMRMD + A ILN + R+LREYGEE +
Sbjct: 117 SFQIDEVERGFSYSVDSPLDMRMDQSSGRTAAQILNESDPGALVRMLREYGEEKFADRIV 176
Query: 289 NKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLES 348
IV R R + ++G LV++I P RR+ A R FQALRIAVN E++TL +
Sbjct: 177 RAIVTERDRQPIETSGRLVEIITEAIPAT-VRRKRHSHPAKRTFQALRIAVNREMETLPA 235
Query: 349 SLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE 408
L D L GGR+ V+S+HSLEDR VK+ F DA +
Sbjct: 236 VLPRALDRLDVGGRIAVLSYHSLEDRPVKEAF--------RDACA-----------DTAP 276
Query: 409 TWIRQIIQGWNGKI--LTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ + + K +T+ P A+E N R SA+LRVI+++
Sbjct: 277 AGLPMVPESMAAKFNPVTRGAERPDADEVATNPRSASARLRVIERV 322
>gi|27229243|ref|NP_084066.2| probable methyltransferase-like protein 15 [Mus musculus]
gi|81906157|sp|Q9DCL4.2|MET15_MOUSE RecName: Full=Probable methyltransferase-like protein 15; AltName:
Full=Methyltransferase 5 domain-containing protein 1
gi|26362646|dbj|BAB22281.2| unnamed protein product [Mus musculus]
gi|109730967|gb|AAI17550.1| Methyltransferase 5 domain containing 1 [Mus musculus]
gi|109732458|gb|AAI15927.1| Methyltransferase 5 domain containing 1 [Mus musculus]
Length = 406
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 126/360 (35%), Positives = 190/360 (52%), Gaps = 48/360 (13%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HIPVM+ +V+ + + F+D T G+ GH+ AI++ P++ ++ +D DP A A A
Sbjct: 72 HIPVMVDQVVHCLAPQKG-QVFLDMTFGSGGHTRAILQKEPDVMVY-ALDRDPVAYAIAE 129
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDEN---ILRSGV-----DAILMDLGM 227
L+ L Q I+++LGQ + ++++GV D ILMDLG
Sbjct: 130 -QLSRLYPTQ----------------IQALLGQFSQAEALLMKAGVQPGTIDGILMDLGC 172
Query: 228 SSMQVNNPERGFSVLGDGPLDMRMD-------PQASLKAEDILNSWPDAEVGRVLREYGE 280
SSMQ++ PERGFS+ DGPLDMRMD P AS D++N+ + +LR YGE
Sbjct: 173 SSMQLDAPERGFSLRKDGPLDMRMDGDRYPDTPTAS----DVVNALDQQALASILRAYGE 228
Query: 281 ESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTP--GMRGRR---QGWIKTATRVFQAL 335
E + + + I+QAR + T +L ++ P + R+ Q AT+ FQAL
Sbjct: 229 EKHAKKIASAIIQARSTYPISRTQQLASIVAGAFPPSAVYARKDLLQRSTHIATKTFQAL 288
Query: 336 RIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE 395
RI VN+EL L + L L GGRL +SFHSLEDRIVK+ L I R + +
Sbjct: 289 RIFVNNELNELYAGLRTAEKFLKTGGRLVALSFHSLEDRIVKRFLLGISMTERFNLSIRQ 348
Query: 396 EELRNIRDDNINETWIRQIIQG---WNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ + + D+ ET R ++ W +++ K+ +TP ++ + N R RSAKLR K+
Sbjct: 349 KVKQTSQLDSDQETEERHSVRAPLKW--ELIHKKVLTPEDQDVQDNPRGRSAKLRAAIKL 406
>gi|335053988|ref|ZP_08546813.1| S-adenosyl-methyltransferase MraW [Propionibacterium sp. 434-HC2]
gi|333765769|gb|EGL43101.1| S-adenosyl-methyltransferase MraW [Propionibacterium sp. 434-HC2]
Length = 335
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 125/346 (36%), Positives = 174/346 (50%), Gaps = 46/346 (13%)
Query: 116 HIPVMLGEVLD----VFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
HIPVM +LD V S R + VD TLG GH+ A++R P+++L +G+D D AL
Sbjct: 12 HIPVMRARILDLLAVVLKSGRRV--HVDGTLGMGGHAEAVLRRFPDVEL-VGIDRDQQAL 68
Query: 172 AKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG---VDAILMDLGMS 228
A A L FA + +V ++ E + G VD++L+DLG+S
Sbjct: 69 TMAEARLEP--------------FADRVHLVHAVHDELPEVLDDLGLDYVDSVLLDLGLS 114
Query: 229 SMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQ 288
S Q++ ERGFS D PLDMRMD + A ILN + R+LREYGEE +
Sbjct: 115 SFQIDEVERGFSYSVDSPLDMRMDQSSGRTAAQILNESDPGALVRMLREYGEEKFADRIV 174
Query: 289 NKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLES 348
IV R R + ++G LV++I P RR+ A R FQALRIAVN E++TL +
Sbjct: 175 RAIVTERDRQPIETSGRLVEIITEAIPAT-VRRKRHSHPAKRTFQALRIAVNREMETLPA 233
Query: 349 SLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE 408
L D L GGR+ V+S+HSLEDR VK+ F DA +
Sbjct: 234 VLPRALDRLDVGGRIAVLSYHSLEDRPVKEAF--------RDACA-----------DTAP 274
Query: 409 TWIRQIIQGWNGKI--LTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ + + K +T+ P A+E N R SA+LRVI+++
Sbjct: 275 AGLPMVPESMAAKFNPVTRGAERPDADEVATNPRSASARLRVIERV 320
>gi|351703256|gb|EHB06175.1| Putative S-adenosyl-L-methionine-dependent methyltransferase
METT5D1 [Heterocephalus glaber]
Length = 405
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 127/374 (33%), Positives = 192/374 (51%), Gaps = 38/374 (10%)
Query: 93 EKRRTRSNKDYDYESIIQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAII 152
++ T N+D D + + HIPVM+ EV+ + + F+D T G+ GH+ A++
Sbjct: 56 QESHTSPNRDSDTVAEL------HIPVMVNEVVRCLAPQKG-QVFLDMTFGSGGHTKALL 108
Query: 153 RAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDEN 212
+ P++ L+ +D DP+A A A L+ L + K R + Q +
Sbjct: 109 QEEPDITLY-ALDRDPTACALAE-QLSEL-------------YPKQIRALLGPFSQAEAV 153
Query: 213 ILRSGV-----DAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMD----PQASLKAEDIL 263
+L +GV D L+DLG SSMQ++ PERGFS+ DGPLDMRMD P A D++
Sbjct: 154 LLEAGVQPGTLDGALLDLGCSSMQLDTPERGFSLRKDGPLDMRMDGGRYPDMP-TAADVV 212
Query: 264 NSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTP--GMRGRR 321
N+ + +LR YGEE + + + IVQAR + T +L ++ P + R+
Sbjct: 213 NALDRQALASILRRYGEEKHARKIASAIVQARSTYPITRTQQLASIVAGAFPPSAIYARK 272
Query: 322 ---QGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQ 378
Q AT+ FQALRI VN+EL L + L L PGGRL ISFHSLEDRIVK+
Sbjct: 273 DLLQRSTHIATKTFQALRIFVNNELNELYTGLRTAQKFLRPGGRLVAISFHSLEDRIVKR 332
Query: 379 TFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAEEERLN 438
L I + + ++ ++ D+ N+ I + +++ K+ +TP ++ N
Sbjct: 333 FLLGISMMEKFNQSVRQKMVQTWGSDHENKGGI-AVKAPLMWEMIHKKVLTPKDQDIHDN 391
Query: 439 CRCRSAKLRVIQKI 452
R RSAKLR K+
Sbjct: 392 PRARSAKLRAAIKL 405
>gi|406957318|gb|EKD85267.1| S-adenosyl-methyltransferase MraW [uncultured bacterium]
Length = 304
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 115/320 (35%), Positives = 167/320 (52%), Gaps = 46/320 (14%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
++DCTLG GH+ I++ ++ IG+DVDP AL +A+ L L + +
Sbjct: 25 YLDCTLGDGGHTLEILKQGGKV---IGMDVDPQALKRAKERLCDLGYFEDQG---LRLVQ 78
Query: 197 KNFRHIKSVLGQIDEN-----ILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRM 251
NFR +++++ Q + ++S + + DLG+SS+Q+ +PERGFS GPLDMRM
Sbjct: 79 GNFRDLENIISQTESGDQKFASVKSNLAGAIFDLGVSSLQLESPERGFSFGMMGPLDMRM 138
Query: 252 DPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQ 311
DP +++A D+LNS E+ + + GEE L N +V AR +T EL ++
Sbjct: 139 DPTLAVRALDLLNSLSRKELYEIFNQLGEEKYSWRLANALVLAREVKPFTNTLELSKAVE 198
Query: 312 SVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSL 371
V G R + I ATRVFQALR+ VNDEL L+ L + + G + VISFHSL
Sbjct: 199 KVVGGKREK----IHPATRVFQALRMTVNDELGALKEGLDKVRNEIKKDGYIVVISFHSL 254
Query: 372 EDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPS 431
EDRIVK TF R+ G++LTK+PI P+
Sbjct: 255 EDRIVKNTF-------------------------------REWQFAGFGEVLTKKPIVPT 283
Query: 432 AEEERLNCRCRSAKLRVIQK 451
+E N R RSAK+RV ++
Sbjct: 284 EKEVVDNPRSRSAKMRVFKR 303
>gi|399155402|ref|ZP_10755469.1| 16S rRNA m(4)C1402 methyltransferase [SAR324 cluster bacterium SCGC
AAA001-C10]
Length = 316
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 128/345 (37%), Positives = 181/345 (52%), Gaps = 43/345 (12%)
Query: 111 QQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSA 170
+ Q HI V+ EV+D F+ T T +DCTLG GHS ++ P+ KL+ G+D D A
Sbjct: 2 KMQFEHISVLTQEVVD-FAPESTQT-ILDCTLGGGGHSRCLLENFPDAKLY-GIDRDALA 58
Query: 171 LAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG---VDAILMDLGM 227
+ KA A + T+ K + ++ ++ E G D IL DLG+
Sbjct: 59 V-KASAE-------------RLKTYGKQTKLGQASFSELPEFFAECGDPDFDYILADLGL 104
Query: 228 SSMQVNNPERGFSVLGDGPLDMRMDP-QASLKAEDILNSWPDAEVGRVLREYGEESNWHL 286
SS Q+ ERGFS L +GPLDMRMDP + + A +N+ + E+ ++LR++GEE
Sbjct: 105 SSEQLARVERGFSFLREGPLDMRMDPDRQQITAAHFVNNSSEQELLKILRDFGEERFARK 164
Query: 287 LQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTL 346
+ KI++ R + L +T EL L+ SV P R ++QG+ AT FQALRIAVN+EL+ L
Sbjct: 165 IVGKILEFRGKNPLKTTKELAQLVSSVIP-RRLQKQGF-NPATLTFQALRIAVNNELQEL 222
Query: 347 ESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNI 406
E L L GR+ +ISFHSLEDRIVK F R + +
Sbjct: 223 EVLLKQIPSRLKKDGRVALISFHSLEDRIVKHQF------------------RKWENPCV 264
Query: 407 NETWIRQIIQGWN--GKILTKRPITPSAEEERLNCRCRSAKLRVI 449
T + I G G++LT+RP+ + +E N R RSA LRV
Sbjct: 265 CPTDLPYCICGEKPRGRVLTRRPVNATKKEVADNPRSRSAHLRVF 309
>gi|354606724|ref|ZP_09024694.1| ribosomal RNA small subunit methyltransferase H [Propionibacterium
sp. 5_U_42AFAA]
gi|353556839|gb|EHC26208.1| ribosomal RNA small subunit methyltransferase H [Propionibacterium
sp. 5_U_42AFAA]
Length = 335
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 125/346 (36%), Positives = 174/346 (50%), Gaps = 46/346 (13%)
Query: 116 HIPVMLGEVLD----VFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
HIPVM +LD V S R + VD TLG GH+ A++R P+++L +G+D D AL
Sbjct: 12 HIPVMRARILDLLAVVLKSGRRV--HVDGTLGMGGHAEAVLRRFPDVEL-VGIDRDQQAL 68
Query: 172 AKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG---VDAILMDLGMS 228
A A L FA + +V ++ E + G VD++L+DLG+S
Sbjct: 69 TMAEARLEP--------------FADRVHLVHAVHDELPEVLDDLGLDYVDSVLLDLGLS 114
Query: 229 SMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQ 288
S Q++ ERGFS D PLDMRMD + A ILN + R+LREYGEE +
Sbjct: 115 SFQIDEVERGFSYSVDSPLDMRMDQSSGRTAAQILNESDPGALVRMLREYGEEKFADRIV 174
Query: 289 NKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLES 348
IV R R + ++G LV++I P RR+ A R FQALRIAVN E++TL +
Sbjct: 175 RAIVTERDRQPIETSGRLVEIITEAIPAT-VRRKRHSHPAKRTFQALRIAVNREMETLPA 233
Query: 349 SLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE 408
L D L GGR+ V+S+HSLEDR VK+ F DA +
Sbjct: 234 VLPRALDRLDVGGRIAVLSYHSLEDRPVKEAF--------RDACA-----------DTAP 274
Query: 409 TWIRQIIQGWNGKI--LTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ + + K +T+ P A+E N R SA+LRVI+++
Sbjct: 275 AGLPMVPESMAAKFNPVTRGAERPDADEVATNPRSASARLRVIERV 320
>gi|346316473|ref|ZP_08857977.1| methylase MraW [Erysipelotrichaceae bacterium 2_2_44A]
gi|345903096|gb|EGX72866.1| methylase MraW [Erysipelotrichaceae bacterium 2_2_44A]
Length = 311
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 123/337 (36%), Positives = 174/337 (51%), Gaps = 30/337 (8%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H V+L E +D + + +VD TLG GHS+ I+ P+ L+ D D SA+ ++R
Sbjct: 4 HYSVLLQESIDNLAI-HSDGIYVDGTLGRGGHSAEILARIPQGHLY-AFDRDASAIEESR 61
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L + H NF ++K L +G+D +++DLG+SS Q +
Sbjct: 62 ERLAQIGDNVTLIH-------SNFSNLKRELTARGV----TGIDGMVLDLGVSSPQFDEA 110
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
+RGFS D PLDMRMD L A ++N W E+ R+ ++GEES + KI +AR
Sbjct: 111 QRGFSYRFDAPLDMRMDQSQKLSAYQVVNEWEYQELVRIFFQFGEESFAKQIARKIEKAR 170
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +T LVD+I+S P ++G A +VFQA+RIAVNDEL L+ L +
Sbjct: 171 EVKPIETTFALVDVIKSALPAKVLNKKG--HPAKKVFQAIRIAVNDELGELQLVLRDALE 228
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L GGRL VISF SLEDRIVK TF S + D + Q +
Sbjct: 229 LLHVGGRLCVISFQSLEDRIVKDTFASCSKPKQYDK---------------RIPILPQDM 273
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ ++L K+PIT + EE R N R SAKLR I++I
Sbjct: 274 EAAPYRLLNKKPITATEEELRENMRSHSAKLRCIERI 310
>gi|295092968|emb|CBK82059.1| S-adenosyl-methyltransferase MraW [Coprococcus sp. ART55/1]
Length = 311
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 120/341 (35%), Positives = 177/341 (51%), Gaps = 36/341 (10%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
+H V+L E +D + + +VD TLG AGHS I++ E IG+D D A+A A
Sbjct: 4 AHKSVLLEETIDNLNI-KPDGIYVDGTLGGAGHSEQIVKRLGEGGRLIGIDQDEDAIAAA 62
Query: 175 RAHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
L P+ T + N+++ + +L ++ NI + VD IL+DLG+SS Q++
Sbjct: 63 SKRL--------EPYGDKVTIVRDNYQNFRRILDEL--NIQK--VDGILLDLGVSSYQLD 110
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
N +RGF+ D PLDMRMD + + A+DI+N + +AE+ R+L++YGEE + I +
Sbjct: 111 NADRGFTYRVDAPLDMRMDNRQTKTAKDIVNDYSEAELFRILKDYGEERYAKSIAYHICK 170
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353
R + +T EL D+I+ P R G + + FQA+RI +N EL L S+
Sbjct: 171 YRENKVIETTEELNDIIRGSIPAK--ARNGQGHPSKQTFQAIRIELNRELDVLRDSIDGM 228
Query: 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQ 413
L PGGRL +I+FHSLEDRIVK F R + I
Sbjct: 229 IASLNPGGRLCIITFHSLEDRIVKLAF------------------RKNENPCICPPNFPV 270
Query: 414 IIQGWN--GKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
G GK++T++PI P E N R +S+KLRV + I
Sbjct: 271 CTCGRKPLGKVITRKPIIPGERELEENSRSKSSKLRVFEAI 311
>gi|295130325|ref|YP_003580988.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes SK137]
gi|335052239|ref|ZP_08545131.1| S-adenosyl-methyltransferase MraW [Propionibacterium sp. 409-HC1]
gi|342212867|ref|ZP_08705592.1| S-adenosyl-methyltransferase MraW [Propionibacterium sp. CC003-HC2]
gi|365964706|ref|YP_004946271.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes TypeIA2
P.acn17]
gi|365973642|ref|YP_004955201.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes TypeIA2
P.acn33]
gi|386023711|ref|YP_005942014.1| ribosomal RNA small subunit methyltransferase H [Propionibacterium
acnes 266]
gi|407935163|ref|YP_006850805.1| 16S rRNA m(4)C1402 methyltransferase [Propionibacterium acnes C1]
gi|417929187|ref|ZP_12572571.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes SK182]
gi|422385182|ref|ZP_16465317.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL096PA3]
gi|422428368|ref|ZP_16505279.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL087PA1]
gi|422431286|ref|ZP_16508165.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL072PA2]
gi|422432913|ref|ZP_16509781.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL059PA2]
gi|422435453|ref|ZP_16512310.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL083PA2]
gi|422437793|ref|ZP_16514637.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL092PA1]
gi|422443271|ref|ZP_16520069.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL002PA1]
gi|422445433|ref|ZP_16522180.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL027PA1]
gi|422448787|ref|ZP_16525512.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL036PA3]
gi|422452130|ref|ZP_16528831.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL030PA2]
gi|422454720|ref|ZP_16531400.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL087PA3]
gi|422480349|ref|ZP_16556752.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL063PA1]
gi|422482842|ref|ZP_16559231.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL036PA1]
gi|422488930|ref|ZP_16565259.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL013PA2]
gi|422491024|ref|ZP_16567339.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL020PA1]
gi|422493019|ref|ZP_16569319.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL086PA1]
gi|422496057|ref|ZP_16572344.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL025PA1]
gi|422498797|ref|ZP_16575069.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL002PA3]
gi|422501028|ref|ZP_16577282.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL063PA2]
gi|422502610|ref|ZP_16578855.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL027PA2]
gi|422506557|ref|ZP_16582780.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL036PA2]
gi|422507832|ref|ZP_16584013.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL046PA2]
gi|422510929|ref|ZP_16587075.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL059PA1]
gi|422513093|ref|ZP_16589216.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL087PA2]
gi|422515965|ref|ZP_16592074.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL110PA2]
gi|422524684|ref|ZP_16600693.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL053PA2]
gi|422526981|ref|ZP_16602971.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL083PA1]
gi|422532653|ref|ZP_16608599.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL110PA1]
gi|422534070|ref|ZP_16609994.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL072PA1]
gi|422537651|ref|ZP_16613539.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL078PA1]
gi|422539738|ref|ZP_16615611.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL013PA1]
gi|422545713|ref|ZP_16621543.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL082PA1]
gi|422547539|ref|ZP_16623355.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL050PA3]
gi|422549393|ref|ZP_16625193.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL050PA1]
gi|422552528|ref|ZP_16628319.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL005PA3]
gi|422554480|ref|ZP_16630252.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL005PA2]
gi|422556518|ref|ZP_16632272.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL025PA2]
gi|422563351|ref|ZP_16639028.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL046PA1]
gi|422568946|ref|ZP_16644564.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL002PA2]
gi|422569663|ref|ZP_16645270.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL067PA1]
gi|422578971|ref|ZP_16654495.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL005PA4]
gi|291376254|gb|ADE00109.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes SK137]
gi|313764743|gb|EFS36107.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL013PA1]
gi|313791793|gb|EFS39904.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL110PA1]
gi|313802120|gb|EFS43352.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL110PA2]
gi|313807237|gb|EFS45724.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL087PA2]
gi|313809743|gb|EFS47464.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL083PA1]
gi|313813215|gb|EFS50929.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL025PA1]
gi|313815808|gb|EFS53522.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL059PA1]
gi|313818283|gb|EFS55997.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL046PA2]
gi|313820045|gb|EFS57759.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL036PA1]
gi|313823146|gb|EFS60860.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL036PA2]
gi|313825577|gb|EFS63291.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL063PA1]
gi|313827816|gb|EFS65530.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL063PA2]
gi|313838452|gb|EFS76166.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL086PA1]
gi|314915234|gb|EFS79065.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL005PA4]
gi|314918537|gb|EFS82368.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL050PA1]
gi|314919800|gb|EFS83631.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL050PA3]
gi|314925467|gb|EFS89298.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL036PA3]
gi|314931815|gb|EFS95646.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL067PA1]
gi|314955971|gb|EFT00369.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL027PA1]
gi|314958366|gb|EFT02469.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL002PA1]
gi|314960282|gb|EFT04384.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL002PA2]
gi|314963091|gb|EFT07191.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL082PA1]
gi|314978268|gb|EFT22362.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL072PA2]
gi|314987732|gb|EFT31823.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL005PA2]
gi|314990211|gb|EFT34302.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL005PA3]
gi|315077555|gb|EFT49613.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL053PA2]
gi|315080339|gb|EFT52315.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL078PA1]
gi|315084598|gb|EFT56574.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL027PA2]
gi|315085934|gb|EFT57910.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL002PA3]
gi|315088648|gb|EFT60624.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL072PA1]
gi|315098257|gb|EFT70233.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL059PA2]
gi|315101052|gb|EFT73028.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL046PA1]
gi|315108244|gb|EFT80220.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL030PA2]
gi|327332217|gb|EGE73954.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL096PA3]
gi|327442839|gb|EGE89493.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL013PA2]
gi|327451061|gb|EGE97715.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL087PA3]
gi|327452857|gb|EGE99511.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL092PA1]
gi|327453584|gb|EGF00239.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL083PA2]
gi|328753094|gb|EGF66710.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL087PA1]
gi|328753749|gb|EGF67365.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL020PA1]
gi|328759161|gb|EGF72777.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL025PA2]
gi|332675167|gb|AEE71983.1| ribosomal RNA small subunit methyltransferase H [Propionibacterium
acnes 266]
gi|333764325|gb|EGL41722.1| S-adenosyl-methyltransferase MraW [Propionibacterium sp. 409-HC1]
gi|340768411|gb|EGR90936.1| S-adenosyl-methyltransferase MraW [Propionibacterium sp. CC003-HC2]
gi|340773310|gb|EGR95802.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes SK182]
gi|365741387|gb|AEW81081.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes TypeIA2
P.acn17]
gi|365743641|gb|AEW78838.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes TypeIA2
P.acn33]
gi|407903744|gb|AFU40574.1| 16S rRNA m(4)C1402 methyltransferase [Propionibacterium acnes C1]
gi|456739521|gb|EMF64060.1| 16S rRNA m(4)C1402 methyltransferase [Propionibacterium acnes
FZ1/2/0]
Length = 337
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 125/346 (36%), Positives = 174/346 (50%), Gaps = 46/346 (13%)
Query: 116 HIPVMLGEVLD----VFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
HIPVM +LD V S R + VD TLG GH+ A++R P+++L +G+D D AL
Sbjct: 14 HIPVMRARILDLLAVVLKSGRRV--HVDGTLGMGGHAEAVLRRFPDVEL-VGIDRDQQAL 70
Query: 172 AKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG---VDAILMDLGMS 228
A A L FA + +V ++ E + G VD++L+DLG+S
Sbjct: 71 TMAEARLEP--------------FADRVHLVHAVHDELPEVLDDLGLDYVDSVLLDLGLS 116
Query: 229 SMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQ 288
S Q++ ERGFS D PLDMRMD + A ILN + R+LREYGEE +
Sbjct: 117 SFQIDEVERGFSYSVDSPLDMRMDQSSGRTAAQILNESDPGALVRMLREYGEEKFADRIV 176
Query: 289 NKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLES 348
IV R R + ++G LV++I P RR+ A R FQALRIAVN E++TL +
Sbjct: 177 RAIVTERDRQPIETSGRLVEIITEAIPAT-VRRKRHSHPAKRTFQALRIAVNREMETLPA 235
Query: 349 SLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE 408
L D L GGR+ V+S+HSLEDR VK+ F DA +
Sbjct: 236 VLPRALDRLDVGGRIAVLSYHSLEDRPVKEAF--------RDACA-----------DTAP 276
Query: 409 TWIRQIIQGWNGKI--LTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ + + K +T+ P A+E N R SA+LRVI+++
Sbjct: 277 AGLPMVPESMAAKFNPVTRGAERPDADEVATNPRSASARLRVIERV 322
>gi|386283662|ref|ZP_10060886.1| 16S rRNA m(4)C1402 methyltransferase [Sulfurovum sp. AR]
gi|385345205|gb|EIF51917.1| 16S rRNA m(4)C1402 methyltransferase [Sulfurovum sp. AR]
Length = 311
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 121/338 (35%), Positives = 176/338 (52%), Gaps = 43/338 (12%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
++ HIPV+L EVL+ F FVDCTLG AGHSS I+ + LK HIG+D D ALA
Sbjct: 2 ETPHIPVLLDEVLESFKGVGE-GYFVDCTLGYAGHSSEILAKYENLK-HIGIDRDDEALA 59
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
++ L +A L TFA F ++ S + A+L D G+SS+Q+
Sbjct: 60 FSKKRLEPY---EARSTLYKGTFATVFPTLQ-----------ESPIVAVLADFGVSSLQL 105
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ ERGFS + LDMRMD + L A +++N +P ++ + YGE ++ L + +V
Sbjct: 106 DKQERGFSFTSET-LDMRMDAFSPLSAYEVVNEYPQEKLEYIFDVYGEIRSFKKLASAVV 164
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
+AR + ++S EL ++ ++V P G I AT +FQA+RI VN+EL +E L A
Sbjct: 165 EARAQAPINSAKELSEIAKTVIPA-----GGKIHPATLMFQAIRIEVNNELGEIEGLLDA 219
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
G + +ISFHSLEDR+VK F + + I +
Sbjct: 220 LEHKHVKGEVVSLISFHSLEDRLVKNRF------------------KKWAQNCICDPQAM 261
Query: 413 QIIQGWN---GKILTKRPITPSAEEERLNCRCRSAKLR 447
+ G N GK + +P+T S EE ++N R RSAKLR
Sbjct: 262 RCTCGKNHALGKAFSSKPVTASKEELKVNPRSRSAKLR 299
>gi|418186350|ref|ZP_12822881.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA47360]
gi|418229078|ref|ZP_12855688.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
EU-NP01]
gi|421269769|ref|ZP_15720626.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae SPAR48]
gi|353854172|gb|EHE34152.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA47360]
gi|353890915|gb|EHE70674.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
EU-NP01]
gi|395870421|gb|EJG81534.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae SPAR48]
Length = 316
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 183/345 (53%), Gaps = 45/345 (13%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 7 HVTVLLHETIDMLDV-KPDGIYVDATLGGAGHSEYLLSKLSEKGHLYAFDQDQNAIDNAQ 65
Query: 176 AHLNSLLHGQAHPHLKTH--TFAK-NFRHIKSVLGQIDENILRSGV---DAILMDLGMSS 229
L P+++ TF K NFRH+++ L + +GV D I DLG+SS
Sbjct: 66 KRLA--------PYIEKGMVTFIKDNFRHLQARLRE-------AGVQEIDGICYDLGVSS 110
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
Q++ ERGFS D PLDMRM+ ASL A +++N + ++ R+ +YGE+ +
Sbjct: 111 PQLDQRERGFSYKKDAPLDMRMNQDASLTAYEVVNHYDYHDLARIFFKYGEDKFSKQIAR 170
Query: 290 KIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESS 349
KI QAR + +T EL ++I+ V P +++G A ++FQA+RI VNDEL + S
Sbjct: 171 KIEQAREVKPIETTTELAEIIKLVKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADES 228
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNIN 407
+ D LA GR+ VI+FHSLEDR+ KQ F ++A E + L I DD
Sbjct: 229 IQQAMDMLALDGRISVITFHSLEDRLTKQLF--------KEASTVEVPKGLPFIPDD--- 277
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++++++PI PSAEE N R SAKLRV +KI
Sbjct: 278 --------LKPKMELVSRKPILPSAEELEANNRSHSAKLRVARKI 314
>gi|419435249|ref|ZP_13975345.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
8190-05]
gi|379616918|gb|EHZ81611.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
8190-05]
Length = 316
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 183/345 (53%), Gaps = 45/345 (13%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 7 HVTVLLHETIDMLDV-KPDGIYVDATLGGAGHSEYLLSKLSEKGHLYAFDQDQNAIDNAQ 65
Query: 176 AHLNSLLHGQAHPHLKTH--TFAK-NFRHIKSVLGQIDENILRSGV---DAILMDLGMSS 229
L P+++ TF K NFRH++ L + +GV D I DLG+SS
Sbjct: 66 QRLA--------PYIEKGMVTFIKENFRHLQVRLRE-------AGVQEIDGICYDLGVSS 110
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
Q++ ERGFS D PLDMRM+ ASL A +++N++ ++ R+ +YGE+ +
Sbjct: 111 PQLDQRERGFSYKKDAPLDMRMNQDASLTAYEVVNNYDYHDLVRIFFKYGEDKFSKQIAR 170
Query: 290 KIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESS 349
KI QAR + +T EL ++I+S P +++G A ++FQA+RI VNDEL + S
Sbjct: 171 KIEQAREVKAIETTTELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADES 228
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNIN 407
+ D LA GR+ VI+FHSLEDR+ KQ F ++A E + L I DD
Sbjct: 229 IQQAMDMLALDGRISVITFHSLEDRLTKQLF--------KEASTVEVPKGLPFIPDD--- 277
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++++++PI PSAEE N R SAKLRV +KI
Sbjct: 278 --------LKPKMELVSRKPILPSAEELEANNRSHSAKLRVARKI 314
>gi|449280918|gb|EMC88143.1| Putative S-adenosyl-L-methionine-dependent methyltransferase
METT5D1 [Columba livia]
Length = 349
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 124/357 (34%), Positives = 187/357 (52%), Gaps = 41/357 (11%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H PVML EV++ S + F+D T GA GH++A++ ++ ++ +D DP+A A+
Sbjct: 14 HTPVMLEEVVNCLSP-QPGQCFLDMTFGAGGHTTALLEKTRDITVY-ALDRDPTAYKIAQ 71
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDEN---ILRSGV-----DAILMDLGM 227
+++P + I+++LGQ ++ ++ SGV D +L+D G
Sbjct: 72 QL------SESYP-----------KQIRALLGQFSQSEALLISSGVEPGTLDGVLLDAGC 114
Query: 228 SSMQVNNPERGFSVLGDGPLDMRMD----PQASLKAEDILNSWPDAEVGRVLREYGEESN 283
SSMQ + PERGFS+ DGPLDMRMD P A D++N+ + +LR YGEE +
Sbjct: 115 SSMQFDTPERGFSLQKDGPLDMRMDGDRYPDMP-TAADVVNALDQQALASILRTYGEERH 173
Query: 284 WHLLQNKIVQARLRGGLHSTGELVDLIQSVTPG--MRGRR---QGWIKTATRVFQALRIA 338
+ + IVQAR + T +L ++ P + R+ Q AT+ FQ LRI
Sbjct: 174 AKKIASAIVQARSIYPITRTQQLASIVAGAFPASALYARKDLLQRPAHVATKTFQGLRIF 233
Query: 339 VNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEEL 398
VNDEL L L L PGGRL +SFHSLEDRIVK+ FL ID + G+ +++
Sbjct: 234 VNDELHELFIGLKTAEKFLKPGGRLVALSFHSLEDRIVKR-FLHGIDMTEKYNLGSRQKI 292
Query: 399 RNIRDDNINETWIRQIIQGWNGK---ILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
R + E ++ G + + K+ +TP +++ + N R RSAKLR KI
Sbjct: 293 RQALKNRSKEEDAQEFPHGKSNSRWIFIQKKALTPQSKDIQTNPRGRSAKLRAAIKI 349
>gi|306824545|ref|ZP_07457891.1| S-adenosyl-methyltransferase MraW [Streptococcus sp. oral taxon 071
str. 73H25AP]
gi|304433332|gb|EFM36302.1| S-adenosyl-methyltransferase MraW [Streptococcus sp. oral taxon 071
str. 73H25AP]
Length = 316
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 123/344 (35%), Positives = 184/344 (53%), Gaps = 43/344 (12%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 7 HVTVLLHETIDMLDV-KPDGIYVDATLGGAGHSEYLLSKLSEKGHLYAFDQDQNAIDNAQ 65
Query: 176 AHLNSLLHGQAHPHLKTH--TFAK-NFRHIKSVLGQ--IDENILRSGVDAILMDLGMSSM 230
L P+++ TF K NFRH+++ L + + E +D I DLG+SS
Sbjct: 66 KRLA--------PYIEKGMVTFIKDNFRHLQARLQEAGVQE------IDGICYDLGVSSP 111
Query: 231 QVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNK 290
Q++ ERGFS D PLDMRM+ +ASL A +++N + ++ R+ +YGE+ + K
Sbjct: 112 QLDQRERGFSYKKDAPLDMRMNQEASLTAYEVVNHYDYHDLVRIFFKYGEDKFSKQIARK 171
Query: 291 IVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSL 350
I QAR + +T EL ++I+S P +++G A ++FQA+RI VNDEL + S+
Sbjct: 172 IEQAREVKPIETTTELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADESI 229
Query: 351 HACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNINE 408
D LA GR+ VI+FHSLEDR+ KQ F ++A E + L I DD
Sbjct: 230 QQAMDMLALDGRISVITFHSLEDRLTKQLF--------KEASTVEVPKGLPFIPDD---- 277
Query: 409 TWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++++++PI PSAEE N R SAKLRV +KI
Sbjct: 278 -------LKPKMELVSRKPILPSAEELVANNRSHSAKLRVARKI 314
>gi|402835338|ref|ZP_10883907.1| S-adenosyl-methyltransferase MraW [Mogibacterium sp. CM50]
gi|402274835|gb|EJU24006.1| S-adenosyl-methyltransferase MraW [Mogibacterium sp. CM50]
Length = 309
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 122/342 (35%), Positives = 172/342 (50%), Gaps = 42/342 (12%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+PV+ EV+D R +++D T+G GHSS I E + VD D AL A
Sbjct: 5 HVPVLFNEVIDSLGI-RANGTYMDGTVGGGGHSSGICERLSEKGHLLAVDRDSIALRAAE 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L A K N+ I ++ + VD IL+DLG+SS Q++
Sbjct: 64 DRL-------ADYDCKKTFIHANYSDIDAIKAEC------GSVDGILLDLGVSSYQLDTA 110
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
ERGFS + D P+DMRM+ A ++N + + E+ R+++EYGEE + IV+AR
Sbjct: 111 ERGFSYMHDAPMDMRMNEDDLFTAYQVVNEYSEKELFRIIKEYGEERWASRIAKFIVKAR 170
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +TG+LV++I++ P RR G A R FQA+RI VN EL+ L ++ D
Sbjct: 171 SEAKIETTGQLVEIIKAAIPA-SARRTGP-HPAKRTFQAIRIEVNGELEHLSRAMEKLPD 228
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
LA GGR+ VI+FHSLEDRIVK F N R + T ++
Sbjct: 229 LLASGGRMAVITFHSLEDRIVKVAF-------------------NKRANPC--TCPPELP 267
Query: 416 QGWNGKI-----LTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
GK+ +T +PI S E N R RSAKLRVI+K+
Sbjct: 268 VCICGKVADITKVTSKPIVASEHELEENPRARSAKLRVIEKL 309
>gi|410465727|ref|ZP_11318942.1| S-adenosyl-methyltransferase MraW [Desulfovibrio magneticus str.
Maddingley MBC34]
gi|409981243|gb|EKO37839.1| S-adenosyl-methyltransferase MraW [Desulfovibrio magneticus str.
Maddingley MBC34]
Length = 324
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 122/351 (34%), Positives = 178/351 (50%), Gaps = 46/351 (13%)
Query: 111 QQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSA 170
+ Q H PV+L EV+++ R +D T+G GHS ++ A +G+D D A
Sbjct: 2 EGQPIHKPVLLREVIELLGI-RPGMKILDATVGLGGHSRGMLEAAGGEGQVLGLDRDREA 60
Query: 171 LAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG---VDAILMDLGM 227
L++A L + R +++ + + +G VDA L+D GM
Sbjct: 61 LSEAGRRLAP--------------YGDRVRLVRTRSSRFPAVLAEAGWEKVDAALLDAGM 106
Query: 228 SSMQVNNPERGFSVLGDGPLDMRMDPQ-ASLKAEDILNSWPDAEVGRVLREYGEESNWHL 286
SS+Q+++PERGF L DGPLDMRM + AE ++N A + ++REYGE+
Sbjct: 107 SSLQLDDPERGFGFLNDGPLDMRMGAEDGGETAEGLVNLASYARLCEIIREYGEDPQAGR 166
Query: 287 LQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTL 346
+ IV AR + + +T L +++ P + R ATR FQALR+AVN+EL L
Sbjct: 167 IARAIVSAREKEAITTTARLAEVVWQAYPA-KWRATARQHPATRTFQALRMAVNEELAEL 225
Query: 347 ESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNI 406
E+ L A D LAPGGR+ VISFHSLEDR+VK+ F R +
Sbjct: 226 EAFLKAIPDHLAPGGRVAVISFHSLEDRLVKRAF---------------------RAEAT 264
Query: 407 NETWIRQIIQGWNG-----KILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ R+ + G +ILTK+P+ EE R N R RSAKLRV +++
Sbjct: 265 DCICPREQVVCVCGHRARFRILTKKPVMAGEEEVRDNSRARSAKLRVAERL 315
>gi|335046818|ref|ZP_08539841.1| S-adenosyl-methyltransferase MraW [Oribacterium sp. oral taxon 108
str. F0425]
gi|333760604|gb|EGL38161.1| S-adenosyl-methyltransferase MraW [Oribacterium sp. oral taxon 108
str. F0425]
Length = 312
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 118/338 (34%), Positives = 170/338 (50%), Gaps = 34/338 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H ++L E ++ S + +VD TLG GHS I + + IG+D D A+ A
Sbjct: 5 HKSILLNECMEGLSI-KADGIYVDGTLGGGGHSFHIAQRLSDKGRLIGIDQDEDAIEAAT 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L A + N+ H + +L + VD IL+DLG+SS Q +
Sbjct: 64 KRL-------AQFKQRVTIVRDNYEHFQEILSTLS----IPAVDGILLDLGVSSYQFDEA 112
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
+RGFS D PLDMRMD + A+D++NS+ +AE+ ++R+YGE+ + IV R
Sbjct: 113 DRGFSYRFDAPLDMRMDKRQDFTAKDLINSYSEAELYHIIRDYGEDKFAKNIAKHIVLER 172
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + +T EL ++I P M+ R QG A + FQA+RIA+N EL+ LE SL
Sbjct: 173 AKKPIETTFELSEVISHAIP-MKMRVQGG-HPAKKTFQAIRIALNRELEVLEESLDGMIK 230
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L PGGRL +I+FHSLEDRIVK+ F R D I
Sbjct: 231 ALKPGGRLCIITFHSLEDRIVKRAF------------------RTAEDPCICPKDFPICT 272
Query: 416 QGWN--GKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
G GK+++K+ I PS E N R +SAKLR+ ++
Sbjct: 273 CGRKSLGKVISKKAILPSDLEREENPRSKSAKLRIFER 310
>gi|336321103|ref|YP_004601071.1| S-adenosyl-methyltransferase MraW [[Cellvibrio] gilvus ATCC 13127]
gi|336104684|gb|AEI12503.1| S-adenosyl-methyltransferase MraW [[Cellvibrio] gilvus ATCC 13127]
Length = 336
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 107/270 (39%), Positives = 151/270 (55%), Gaps = 22/270 (8%)
Query: 116 HIPVMLGEVLDVFSSS--RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAK 173
H+PV+L L++ + + VDCTLG GH+ ++R P +++ +G+D D AL
Sbjct: 15 HVPVLLERCLELLAPALAEPGAVMVDCTLGMGGHTEGVLRRFPHVRV-VGLDRDTQALEL 73
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAI---LMDLGMSSM 230
A L F F + +V +I + + G+ A+ LMDLG+SS+
Sbjct: 74 AGERLAP--------------FGDRFTGVHAVYDEIRDVLADLGIPAVQGVLMDLGVSSL 119
Query: 231 QVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNK 290
Q++ ERGFS D PLDMRMD A L A D+LN++ + ++ RVLR YGEE +
Sbjct: 120 QLDEAERGFSYAKDAPLDMRMDATAGLTAADVLNTYDERDLVRVLRTYGEERFAPRIARS 179
Query: 291 IVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSL 350
+V+AR L TGELVDLI+S P M R+ G A R FQALRI VN EL+ L+ +L
Sbjct: 180 VVRARAVAPLARTGELVDLIRSSIP-MAARQTGG-HPAKRTFQALRIEVNGELEALQHAL 237
Query: 351 HACFDCLAPGGRLGVISFHSLEDRIVKQTF 380
+ LA GGR+ V ++ SLEDR+VK
Sbjct: 238 PESIEALAVGGRIVVEAYQSLEDRLVKHAL 267
>gi|312866364|ref|ZP_07726582.1| S-adenosyl-methyltransferase MraW [Streptococcus downei F0415]
gi|311098058|gb|EFQ56284.1| S-adenosyl-methyltransferase MraW [Streptococcus downei F0415]
Length = 316
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 120/340 (35%), Positives = 188/340 (55%), Gaps = 35/340 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAII-RAHPELKLHIGVDVDPSALAKA 174
H+ V+L E +D+ + + +VD TLG AGHS+ ++ + P+ L+ D D SA+ A
Sbjct: 7 HVSVLLHETVDMLAP-KPDGIYVDATLGGAGHSAYLLSKLGPKGHLYC-FDQDQSAIDNA 64
Query: 175 RAHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
+ L + G TF K NFR++K+ L + E + + +D IL DLG+SS Q+
Sbjct: 65 QVKLKDYVDRGMV-------TFIKDNFRNLKADLAE--EGV--TQIDGILYDLGVSSPQL 113
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
+ ERGFS D PLDMRM+ +A L A D++N++ ++ ++ +YGE+ + KI
Sbjct: 114 DQRERGFSYKQDAPLDMRMNQEADLSAYDVVNTYSYQDLVKIFFKYGEDKFSKQIARKIE 173
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
QAR + +T EL ++I+S P +++G A ++FQA+RI VNDEL + S+
Sbjct: 174 QARKSKPIETTTELTEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADESIQQ 231
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
+ LA GR+ VI+FHSLEDR+ KQ F +E ++ D +I
Sbjct: 232 ALELLALDGRISVITFHSLEDRLTKQIF---------------KEASSV-DVPKGLPFIP 275
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ +Q ++ ++PI PS E +N R SAKLRV +KI
Sbjct: 276 EEMQPKIA-LVNRKPILPSQGELSVNNRAHSAKLRVAKKI 314
>gi|167966821|ref|ZP_02549098.1| S-adenosyl-methyltransferase MraW [Mycobacterium tuberculosis
H37Ra]
Length = 331
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 104/254 (40%), Positives = 141/254 (55%), Gaps = 23/254 (9%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
+D T+GA GH+ + P L+L IG+D DP+AL AR+ L FA
Sbjct: 28 LLDATIGAGGHAERFLEGLPGLRL-IGLDRDPTALDVARSRLVR--------------FA 72
Query: 197 KNFRHIKSVLGQIDENILRSG------VDAILMDLGMSSMQVNNPERGFSVLGDGPLDMR 250
+ + + + SG VD IL DLG+SSMQ++ ERGF+ D PLDMR
Sbjct: 73 DRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRAERGFAYATDAPLDMR 132
Query: 251 MDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLI 310
MDP L A DI+N++ +A + +LR YGEE + IV+ R + ST ELV L+
Sbjct: 133 MDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRRAKTPFTSTAELVALL 192
Query: 311 QSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHS 370
P RR G A R FQALRIAVNDEL++L +++ A D LA GGR+ V+++ S
Sbjct: 193 YQAIPAP-ARRVGG-HPAKRTFQALRIAVNDELESLRTAVPAALDALAIGGRIAVLAYQS 250
Query: 371 LEDRIVKQTFLSII 384
LEDRIVK+ F +
Sbjct: 251 LEDRIVKRVFAEAV 264
>gi|405977453|gb|EKC41904.1| Putative S-adenosyl-L-methionine-dependent methyltransferase
METT5D1 [Crassostrea gigas]
Length = 417
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 134/386 (34%), Positives = 204/386 (52%), Gaps = 35/386 (9%)
Query: 76 KAKATSARVGVGMGLVKEKRRTRSNKDYDYESIIQQQQSSHIPVMLGEVLDVFSSSRTIT 135
K KAT + + G +E+ + + +K + ES + + SH+PVM+ EV+ + +
Sbjct: 45 KGKATDSDIWNISGFYQEEFKRKISKLEEPES---EAKFSHVPVMVQEVVKLLHPKQG-K 100
Query: 136 SFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTF 195
F+D T GA GH+ AI+ +PE ++ + +D DP A A S Q P +
Sbjct: 101 LFIDMTFGAGGHTKAILEENPEAQV-VCLDRDPLAYINAEELAKSYGPQQLLPCIG---- 155
Query: 196 AKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMD--- 252
F + +L + I VD IL D+G SSMQ + ERGFS+ +GPLDMRMD
Sbjct: 156 --QFSELPGILKK--HGISPGSVDGILFDVGASSMQYDQRERGFSLSREGPLDMRMDNGR 211
Query: 253 -PQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR-LRGGLHSTGELVDLI 310
P + A D++N E+ ++++YGE+ + + + IV AR + G + +T EL D+I
Sbjct: 212 NPDG-VSAADVVNHLTGQELKHIIKKYGEDPLANKISHAIVSARNVSGRISTTKELADII 270
Query: 311 QSVTPGMRGRRQGWIKT--ATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISF 368
++ G R + K+ ATR FQALRI VNDEL + + LH + L P G ISF
Sbjct: 271 ENALDGTIQRDKLSRKSHVATRTFQALRIFVNDELNEINNGLHVAYHYLRPHGVCVGISF 330
Query: 369 HSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKR-- 426
SLEDRI K+ F ID ++++ R ++DD ++ + +++IQ K+L KR
Sbjct: 331 QSLEDRIFKRHFHG-IDMEEPKNMTSKQQARAMKDD--HQKYSKELIQ----KLLKKRWI 383
Query: 427 -----PITPSAEEERLNCRCRSAKLR 447
+TP+ E N R RSAKLR
Sbjct: 384 PVCKTAMTPTNSEVNENPRSRSAKLR 409
>gi|227544880|ref|ZP_03974929.1| S-adenosyl-methyltransferase [Lactobacillus reuteri CF48-3A]
gi|338204182|ref|YP_004650327.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Lactobacillus reuteri SD2112]
gi|154705578|gb|ABS84215.1| S-adenosyl-methyltransferase MraW [Lactobacillus reuteri]
gi|227185154|gb|EEI65225.1| S-adenosyl-methyltransferase [Lactobacillus reuteri CF48-3A]
gi|336449422|gb|AEI58037.1| S-adenosyl-L-methionine-dependent methyltransferase MraW
[Lactobacillus reuteri SD2112]
Length = 318
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 123/339 (36%), Positives = 174/339 (51%), Gaps = 32/339 (9%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E + + T T +VD TLG GH+ AI++ + L+ D D +A+ +
Sbjct: 6 HVTVLLKEAVAGLNVQPTGT-YVDATLGGGGHTQAILQQLVDGHLY-SFDQDQTAINYNK 63
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
L + + Q K NFR++K+ L + V+ IL DLG+SS Q ++
Sbjct: 64 EQLKTAIEQQ-----KLTLIEDNFRNLKAELDSYN----VKHVNGILYDLGVSSPQFDDA 114
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
+RGFS D PLDMRM+ + L A +++N W + ++L YGEE + KI Q R
Sbjct: 115 KRGFSYQHDAPLDMRMNQEQKLSAMEVVNEWSYERLVKILYRYGEEKFAKSIARKIEQRR 174
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ +T ELVD+I+ P RR G A + FQA+RIAVNDEL LE SL D
Sbjct: 175 KIAPIKTTFELVDVIKEGIPAA-ARRHGG-HPAKKSFQAIRIAVNDELGALEESLEQALD 232
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
L GGR+ VI+F SLEDR+VK F + + +G + I
Sbjct: 233 LLDVGGRISVITFQSLEDRLVKTMFREKTSLSGDVPQG-----------------LPVIP 275
Query: 416 QGW--NGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
G N K++ K+PI S EE N R SAKLR+I+KI
Sbjct: 276 AGMEPNFKLINKKPIVASEEELAANHRAHSAKLRIIEKI 314
>gi|422388202|ref|ZP_16468305.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL096PA2]
gi|422393382|ref|ZP_16473435.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL099PA1]
gi|422424200|ref|ZP_16501150.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL043PA1]
gi|422461600|ref|ZP_16538224.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL038PA1]
gi|422474469|ref|ZP_16550933.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL056PA1]
gi|422477793|ref|ZP_16554216.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL007PA1]
gi|422485682|ref|ZP_16562044.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL043PA2]
gi|422518325|ref|ZP_16594393.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL074PA1]
gi|422521588|ref|ZP_16597618.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL045PA1]
gi|422529422|ref|ZP_16605388.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL053PA1]
gi|422561261|ref|ZP_16636948.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL005PA1]
gi|313772507|gb|EFS38473.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL074PA1]
gi|313830652|gb|EFS68366.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL007PA1]
gi|313833872|gb|EFS71586.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL056PA1]
gi|314973654|gb|EFT17750.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL053PA1]
gi|314976247|gb|EFT20342.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL045PA1]
gi|314983544|gb|EFT27636.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL005PA1]
gi|315096274|gb|EFT68250.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL038PA1]
gi|327325910|gb|EGE67700.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL096PA2]
gi|327446210|gb|EGE92864.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL043PA2]
gi|327447807|gb|EGE94461.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL043PA1]
gi|328760593|gb|EGF74161.1| S-adenosyl-methyltransferase MraW [Propionibacterium acnes
HL099PA1]
Length = 337
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 125/346 (36%), Positives = 174/346 (50%), Gaps = 46/346 (13%)
Query: 116 HIPVMLGEVLD----VFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL 171
HIPVM +LD V S R + VD TLG GH+ A++R P+++L +G+D D AL
Sbjct: 14 HIPVMRARILDLLAVVLKSGRRV--HVDGTLGMGGHAEAVLRRFPDVEL-VGIDRDQQAL 70
Query: 172 AKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG---VDAILMDLGMS 228
A A L FA + +V ++ E + G VD++L+DLG+S
Sbjct: 71 TMAEARLEP--------------FADRVHLVHAVHDELPEVLDDLGLDYVDSVLLDLGLS 116
Query: 229 SMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQ 288
S Q++ ERGFS D PLDMRMD + A ILN + R+LREYGEE +
Sbjct: 117 SFQIDEVERGFSYSVDSPLDMRMDQSSGRTAAQILNESDPGALVRMLREYGEEKFADRIV 176
Query: 289 NKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLES 348
IV R R + ++G LV++I P RR+ A R FQALRIAVN E++TL +
Sbjct: 177 RAIVTERDRQPIETSGRLVEIITGAIPAT-VRRKRHSHPAKRTFQALRIAVNREMETLPA 235
Query: 349 SLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE 408
L D L GGR+ V+S+HSLEDR VK+ F DA +
Sbjct: 236 VLPRALDRLDVGGRIAVLSYHSLEDRPVKEAF--------RDACA-----------DTAP 276
Query: 409 TWIRQIIQGWNGKI--LTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ + + K +T+ P A+E N R SA+LRVI+++
Sbjct: 277 AGLPMVPESMAAKFNPVTRGAERPDADEVATNPRSASARLRVIERV 322
>gi|418993795|ref|ZP_13541432.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIG290]
gi|377746954|gb|EHT70924.1| S-adenosyl-methyltransferase MraW [Staphylococcus aureus subsp.
aureus CIG290]
Length = 304
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 121/331 (36%), Positives = 171/331 (51%), Gaps = 30/331 (9%)
Query: 120 MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLN 179
ML E +D + ++DCTLG AGH+ ++ + I +D D +A+ A+ L
Sbjct: 1 MLNETIDYLNVKEN-GVYIDCTLGGAGHALYLLNQLNDDGRLIAIDQDQTAIDNAKEVLK 59
Query: 180 SLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGF 239
LH H NFR + +L D NI VD I DLG+SS Q++ PERGF
Sbjct: 60 DHLHKVTFVH-------SNFRELTQILK--DLNI--EKVDGIYYDLGVSSPQLDIPERGF 108
Query: 240 SVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGG 299
S D LDMRMD L A +I+N+W + ++ YGEE + +I R +
Sbjct: 109 SYHHDATLDMRMDQTQELTAYEIVNNWSYEALVKIFYRYGEEKFSKQIARRIEAHREQQP 168
Query: 300 LHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAP 359
+ +T ELVD+I+ P + RR+G A RVFQALRIAVNDEL E S+ + +
Sbjct: 169 ITTTLELVDIIKEGIPA-KARRKGG-HPAKRVFQALRIAVNDELSAFEDSIEQAIELVKV 226
Query: 360 GGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWN 419
GR+ VI+FHSLEDR+ KQ F ++ E E R + I E + ++
Sbjct: 227 EGRISVITFHSLEDRLCKQVF--------QEYEKGPEVPRGL--PVIPEAYTPKL----- 271
Query: 420 GKILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
K + ++PIT + E+ N R RSAKLRV +
Sbjct: 272 -KRVNRKPITATEEDLDDNNRARSAKLRVAE 301
>gi|418088731|ref|ZP_12725892.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA43265]
gi|353764472|gb|EHD45021.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
GA43265]
Length = 316
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 183/345 (53%), Gaps = 45/345 (13%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 7 HVTVLLHETIDMLDV-KPDGIYVDATLGGAGHSEYLLSKLSEKGHLYAFDQDQNAIDNAQ 65
Query: 176 AHLNSLLHGQAHPHLKTH--TFAK-NFRHIKSVLGQIDENILRSGV---DAILMDLGMSS 229
L P+++ TF K NFRH+++ L + +GV D I DLG+SS
Sbjct: 66 KRLA--------PYIEKGMVTFIKDNFRHLQARLRE-------AGVQEIDGICYDLGVSS 110
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
Q++ ERGFS D PLDMRM+ ASL A +++N + ++ R+ +YGE+ +
Sbjct: 111 PQLDQRERGFSYKKDAPLDMRMNQDASLTAYEVVNYYDYHDLVRIFFKYGEDKFSKQIAR 170
Query: 290 KIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESS 349
KI QAR + +T EL ++I+S P +++G A ++FQA+RI VNDEL + S
Sbjct: 171 KIEQARDLKPIETTTELAEIIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADES 228
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNIN 407
+ D LA GR+ VI+FHSLEDR+ KQ F ++A E + L I DD
Sbjct: 229 IQQAMDMLAMDGRISVITFHSLEDRLTKQLF--------KEASTVEVPKGLPFIPDD--- 277
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++++++PI PSAEE N R SAKLRV +KI
Sbjct: 278 --------LKPKMELVSRKPILPSAEELEANNRSHSAKLRVARKI 314
>gi|148695830|gb|EDL27777.1| methyltransferase 5 domain containing 1, isoform CRA_a [Mus
musculus]
gi|148695831|gb|EDL27778.1| methyltransferase 5 domain containing 1, isoform CRA_a [Mus
musculus]
Length = 339
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 126/360 (35%), Positives = 190/360 (52%), Gaps = 48/360 (13%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HIPVM+ +V+ + + F+D T G+ GH+ AI++ P++ ++ +D DP A A A
Sbjct: 5 HIPVMVDQVVHCLAPQKG-QVFLDMTFGSGGHTRAILQKEPDVMVY-ALDRDPVAYAIAE 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDEN---ILRSGV-----DAILMDLGM 227
L+ L Q I+++LGQ + ++++GV D ILMDLG
Sbjct: 63 -QLSRLYPTQ----------------IQALLGQFSQAEALLMKAGVQPGTIDGILMDLGC 105
Query: 228 SSMQVNNPERGFSVLGDGPLDMRMD-------PQASLKAEDILNSWPDAEVGRVLREYGE 280
SSMQ++ PERGFS+ DGPLDMRMD P AS D++N+ + +LR YGE
Sbjct: 106 SSMQLDAPERGFSLRKDGPLDMRMDGDRYPDTPTAS----DVVNALDQQALASILRAYGE 161
Query: 281 ESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTP--GMRGRR---QGWIKTATRVFQAL 335
E + + + I+QAR + T +L ++ P + R+ Q AT+ FQAL
Sbjct: 162 EKHAKKIASAIIQARSTYPISRTQQLASIVAGAFPPSAVYARKDLLQRSTHIATKTFQAL 221
Query: 336 RIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE 395
RI VN+EL L + L L GGRL +SFHSLEDRIVK+ L I R + +
Sbjct: 222 RIFVNNELNELYAGLRTAEKFLKTGGRLVALSFHSLEDRIVKRFLLGISMTERFNLSIRQ 281
Query: 396 EELRNIRDDNINETWIRQIIQG---WNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ + + D+ ET R ++ W +++ K+ +TP ++ + N R RSAKLR K+
Sbjct: 282 KVKQTSQLDSDQETEERHSVRAPLKW--ELIHKKVLTPEDQDVQDNPRGRSAKLRAAIKL 339
>gi|421233387|ref|ZP_15690012.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
2061617]
gi|395604099|gb|EJG64232.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
2061617]
Length = 316
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 184/345 (53%), Gaps = 45/345 (13%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 7 HVTVLLHETIDMLDV-KPDGIYVDATLGGAGHSEYLLSKLSEKGHLYAFDQDQNAIDNAQ 65
Query: 176 AHLNSLLHGQAHPHLKTH--TFAK-NFRHIKSVLGQIDENILRSGV---DAILMDLGMSS 229
L P+++ TF K NFRH+++ L + +GV D I DLG+SS
Sbjct: 66 KRLA--------PYIEKGMVTFVKDNFRHLQARLRE-------AGVQEIDGICYDLGVSS 110
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
Q++ ERGFS D PLDMRM+ ASL A +++N++ ++ R+ +YGE+ +
Sbjct: 111 PQLDQRERGFSYKKDAPLDMRMNQDASLTAYEVVNNYDYHDLVRIFFKYGEDKFSKQIAR 170
Query: 290 KIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESS 349
KI QAR + +T EL ++I+ V P +++G A ++FQA+RI VNDEL + S
Sbjct: 171 KIEQAREVKPIETTTELAEIIKLVKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADES 228
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNIN 407
+ D LA GR+ VI+FHSLEDR+ KQ F ++A E + L I DD
Sbjct: 229 IQQAMDMLALDGRISVITFHSLEDRLTKQLF--------KEASTVEVPKGLPFIPDD--- 277
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++++++PI PSAEE N R SAKLRV +KI
Sbjct: 278 --------LKPKMELVSRKPILPSAEELEANNRSHSAKLRVARKI 314
>gi|242278175|ref|YP_002990304.1| S-adenosyl-methyltransferase MraW [Desulfovibrio salexigens DSM
2638]
gi|263446206|sp|C6BYH4.1|RSMH_DESAD RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|242121069|gb|ACS78765.1| S-adenosyl-methyltransferase MraW [Desulfovibrio salexigens DSM
2638]
Length = 324
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 116/343 (33%), Positives = 181/343 (52%), Gaps = 36/343 (10%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALA 172
+ H V+L EV++ + + + ++D TLG AGHSSAI++ E G+D D AL
Sbjct: 9 EEVHTSVLLNEVIE-WLAPKPGGRYLDGTLGMAGHSSAILKIAGEGAELAGLDRDEQALE 67
Query: 173 KARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQV 232
A L + H F F ++ L ++ + VD +++DLG+SS+ +
Sbjct: 68 LAGERLAPFGD-------RAHRFHLAFSKFEAALDELGWDT----VDGVVLDLGVSSLHL 116
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLK-AEDILNSWPDAEVGRVLREYGEESNWHLLQNKI 291
++ ERGFS + DGPLDMRMDP + A I+N +++ R+L+ YGEE + I
Sbjct: 117 DHAERGFSFIKDGPLDMRMDPAGGMPPASSIVNKGSYSDLNRILKLYGEEPLASKITKAI 176
Query: 292 VQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLH 351
+ AR + +T +L +++ P R R AT+ FQ LRIAVN EL+ L++ L
Sbjct: 177 IAAREEEKITTTLQLASIVEKAYPAKR-RALSRTHPATKTFQGLRIAVNSELEELKTFLD 235
Query: 352 ACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWI 411
+ L+PG R+ +ISFHSLEDRIVK+TF + + + +
Sbjct: 236 RIPERLSPGARVAIISFHSLEDRIVKKTF-------------------KAQSQSCDCPPM 276
Query: 412 RQIIQGWNGK---ILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+ I K +LT++P+ P+ EE ++N R RSAKLRV ++
Sbjct: 277 QPICTCGKVKLMNVLTRKPVLPTEEEMKVNTRSRSAKLRVAER 319
>gi|374319492|ref|YP_005065991.1| S-adenosyl-methyltransferase MraW [Rickettsia slovaca 13-B]
gi|360042041|gb|AEV92423.1| S-adenosyl-methyltransferase MraW [Rickettsia slovaca 13-B]
Length = 295
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 117/320 (36%), Positives = 176/320 (55%), Gaps = 41/320 (12%)
Query: 136 SFVDCTLGAAGHSSAIIRAHPELKLHI-GVDVDPSALAKARAHLNSLLHGQAHPHLKTHT 194
S++DCT GA G+S AI+ + ++ +D DP+ + +A + +G+ ++T+
Sbjct: 12 SYLDCTFGAGGYSKAILES---CNCYVTALDRDPNVIKRAEEIQQN--YGERFDFVETN- 65
Query: 195 FAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQ 254
FA +F +K D I++DLG+SSMQ++ +RGFS L DGPLDMRM Q
Sbjct: 66 FADSFAKLKE-----------KKFDGIVLDLGVSSMQLDIADRGFSFLHDGPLDMRMSGQ 114
Query: 255 ASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVT 314
L AE+ +N+ + E+ V+ +YG+ES + +IV+ R + ST +L ++++S
Sbjct: 115 G-LSAEEFVNAAEEKELADVIYKYGDESFSRRIAKRIVEYRKTARIDSTSKLAEIVRSSI 173
Query: 315 PGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHSLEDR 374
G R+G I AT+ FQA+RI VNDEL LE L + L GRL V+SFHSLEDR
Sbjct: 174 ----GFRKGKIDPATKTFQAIRIYVNDELGELEQFLVNVKNILKKDGRLVVVSFHSLEDR 229
Query: 375 IVKQTFLSIIDHNREDAEGNEEELRNIRDDNINE--TWIRQIIQGWNGKILTKRPITPSA 432
IVK F +E++E + +DD + W+ KI+T + + PS
Sbjct: 230 IVKNFF-------KENSEKPVVRSKYAKDDMTIDPNKWL---------KIITNKALAPSD 273
Query: 433 EEERLNCRCRSAKLRVIQKI 452
+E LN R RSAKLR + I
Sbjct: 274 KEVGLNIRARSAKLRAAKAI 293
>gi|308374510|ref|ZP_07667801.1| hypothetical protein TMFG_01127 [Mycobacterium tuberculosis
SUMu006]
gi|422813196|ref|ZP_16861571.1| hypothetical protein TMMG_01445 [Mycobacterium tuberculosis
CDC1551A]
gi|308341663|gb|EFP30514.1| hypothetical protein TMFG_01127 [Mycobacterium tuberculosis
SUMu006]
gi|323719262|gb|EGB28406.1| hypothetical protein TMMG_01445 [Mycobacterium tuberculosis
CDC1551A]
Length = 328
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 104/254 (40%), Positives = 141/254 (55%), Gaps = 23/254 (9%)
Query: 137 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196
+D T+GA GH+ + P L+L IG+D DP+AL AR+ L FA
Sbjct: 25 LLDATIGAGGHAERFLEGLPGLRL-IGLDRDPTALDVARSRLVR--------------FA 69
Query: 197 KNFRHIKSVLGQIDENILRSG------VDAILMDLGMSSMQVNNPERGFSVLGDGPLDMR 250
+ + + + SG VD IL DLG+SSMQ++ ERGF+ D PLDMR
Sbjct: 70 DRLTLVHTRYDCLGAALAESGYAAVGSVDGILFDLGVSSMQLDRAERGFAYATDAPLDMR 129
Query: 251 MDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLI 310
MDP L A DI+N++ +A + +LR YGEE + IV+ R + ST ELV L+
Sbjct: 130 MDPTTPLTAADIVNTYDEAALADILRRYGEERFARRIAAGIVRRRAKTPFTSTAELVALL 189
Query: 311 QSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAPGGRLGVISFHS 370
P RR G A R FQALRIAVNDEL++L +++ A D LA GGR+ V+++ S
Sbjct: 190 YQAIPAP-ARRVGG-HPAKRTFQALRIAVNDELESLRTAVPAALDALAIGGRIAVLAYQS 247
Query: 371 LEDRIVKQTFLSII 384
LEDRIVK+ F +
Sbjct: 248 LEDRIVKRVFAEAV 261
>gi|421531169|ref|ZP_15977599.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas putida S11]
gi|402211394|gb|EJT82861.1| 16S rRNA m(4)C1402 methyltransferase [Pseudomonas putida S11]
Length = 315
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 127/344 (36%), Positives = 180/344 (52%), Gaps = 43/344 (12%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAII-RAHPELKLHIGVDVDPSALAK 173
+HI V+L E ++ + R ++D T G GHS I+ + P+ +L +G D DP A+A
Sbjct: 8 NHITVLLDEAVEALAL-RADGCYLDGTFGRGGHSRLILSKLGPQGRL-LGFDKDPQAIAT 65
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
GQA + F R + ++ E L V +L+DLG+SS Q++
Sbjct: 66 ----------GQALAA-EDGRFVIVQRSFAELGAEVAERGLDGKVSGVLLDLGVSSPQLD 114
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
+PERGFS L DGPLDMRM+P + A + + + P+ E+ RV +EYGEE + +VQ
Sbjct: 115 DPERGFSFLNDGPLDMRMNPDQGISAAEFIATAPEEEIARVFKEYGEERFAKRMARAVVQ 174
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIK---TATRVFQALRIAVNDELKTLESSL 350
R + TG+L ++++ P W K ATR FQ LRI VN+EL LE+ L
Sbjct: 175 RREQQPFTRTGDLAEVLKVANP-------AWEKGKNPATRAFQGLRIHVNNELGDLETGL 227
Query: 351 HACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEEL-RNIR-DDNINE 408
A D L GGRL VISFHSLEDRIVK F+ R+ A+G + L RN+ + E
Sbjct: 228 EAAIDALEVGGRLAVISFHSLEDRIVK-LFM------RKLAKGEADNLPRNLPVQHKVFE 280
Query: 409 TWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
I K++ K A E + N R RSA +RV +K+
Sbjct: 281 PKI---------KLIGKAQFASDA-ELKANPRARSAVMRVAEKL 314
>gi|344342786|ref|ZP_08773656.1| Ribosomal RNA small subunit methyltransferase H [Marichromatium
purpuratum 984]
gi|343805338|gb|EGV23234.1| Ribosomal RNA small subunit methyltransferase H [Marichromatium
purpuratum 984]
Length = 315
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 114/271 (42%), Positives = 143/271 (52%), Gaps = 27/271 (9%)
Query: 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAII-RAHPELKLHIGVDVDPSAL 171
Q+ H V+L E + + +VD T G GHS A++ R P +L IG+D DP A+
Sbjct: 4 QTIHRSVLLDEAVSALVTE-PGGRYVDATFGRGGHSRAVLARLAPTGRL-IGLDRDPEAI 61
Query: 172 AKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG----VDAILMDLGM 227
A ARA + FR + S G I + +G ++ IL+DLG+
Sbjct: 62 AAARALDD-----------------PRFRILHSAFGGIGAALAEAGETEPLNGILLDLGV 104
Query: 228 SSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLL 287
SS Q++ ERGFS DGPLDMRMDP A D L E+ RVLRE+GEE +
Sbjct: 105 SSPQLDTAERGFSFSADGPLDMRMDPSRGESAADWLMHAEQQEIARVLREFGEERFAKRI 164
Query: 288 QNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLE 347
I + R L +T EL L+ P GRR+ ATR FQALRI VNDEL +E
Sbjct: 165 ARAICERRAEAPLRTTAELAALVDRAQP---GRREPGKHPATRTFQALRIQVNDELGEIE 221
Query: 348 SSLHACFDCLAPGGRLGVISFHSLEDRIVKQ 378
L + LAPGGRL VISFHSLEDRIVK
Sbjct: 222 RCLDQVCELLAPGGRLVVISFHSLEDRIVKH 252
>gi|421248694|ref|ZP_15705157.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
2082239]
gi|395615323|gb|EJG75339.1| S-adenosyl-methyltransferase MraW [Streptococcus pneumoniae
2082239]
Length = 316
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 183/345 (53%), Gaps = 45/345 (13%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG AGHS ++ E D D +A+ A+
Sbjct: 7 HVTVLLHETIDMLDV-KPDGIYVDATLGGAGHSEYLLSKLSEKGHLYAFDQDQNAIDNAQ 65
Query: 176 AHLNSLLHGQAHPHLKTH--TFAK-NFRHIKSVLGQIDENILRSGV---DAILMDLGMSS 229
L P+++ TF K NFRH+++ L + +GV D I DLG+SS
Sbjct: 66 KRLA--------PYIEKGMVTFIKDNFRHLQARLRE-------AGVQEIDGICYDLGVSS 110
Query: 230 MQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQN 289
Q++ ERGFS D PLDMRM+ ASL A ++ N + ++ R+ +YGE+ +
Sbjct: 111 PQLDQRERGFSYKKDAPLDMRMNQDASLTAYEVANHYDYHDLVRIFFKYGEDKFSKQIAR 170
Query: 290 KIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESS 349
KI QAR + +T EL ++I+ V P +++G A ++FQA+RI VNDEL+ + S
Sbjct: 171 KIEQAREVKPIETTTELAEIIKLVKPAKELKKKGH--PAKQIFQAIRIEVNDELRAADES 228
Query: 350 LHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNE--EELRNIRDDNIN 407
+ D LA GR+ VI+FHSLEDR+ KQ F ++A E + L I DD
Sbjct: 229 IQQAMDMLALDGRISVITFHSLEDRLTKQLF--------KEASTVEVPKGLPFIPDD--- 277
Query: 408 ETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++++++PI PSAEE N R SAKLRV +KI
Sbjct: 278 --------LKPKMELVSRKPILPSAEELEANNRSHSAKLRVARKI 314
>gi|116750882|ref|YP_847569.1| S-adenosyl-methyltransferase MraW [Syntrophobacter fumaroxidans
MPOB]
gi|171460803|sp|A0LNY2.1|RSMH_SYNFM RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|116699946|gb|ABK19134.1| S-adenosyl-methyltransferase MraW [Syntrophobacter fumaroxidans
MPOB]
Length = 319
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 118/339 (34%), Positives = 179/339 (52%), Gaps = 36/339 (10%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
HIPVML + L++ + R +VD T+G G+S AI+RA + +GVD D A+ +A
Sbjct: 9 HIPVMLEQALELLACRRG-GVYVDGTVGGGGYSEAILRASAPDGILLGVDWDAEAIGRAA 67
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSG---VDAILMDLGMSSMQV 232
L++ + + K+ ++ E + R G VD I++DLG+S+ Q+
Sbjct: 68 GRLSA--------------YGRRAILTKAGFAELPEVLPRHGFAQVDGIVLDLGVSAFQI 113
Query: 233 NNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIV 292
++ RGFS DGPLDMRMDP A D++N+ P+ ++ ++ GEE + +V
Sbjct: 114 DDAARGFSFTKDGPLDMRMDPGLPQTAADMVNTLPEKDLADLIFRLGEERWSRRIARAVV 173
Query: 293 QARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352
+ R T EL D + + P R R+ I ATR F ALR+AVN EL++LE L
Sbjct: 174 ERRRERPFQRTLELADTVAATVPATRDSRR--IHPATRTFLALRLAVNQELESLERFLSG 231
Query: 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIR 412
D L GGRL V+SFHSLEDR+VK F +E A + R R+ + R
Sbjct: 232 ALDLLKTGGRLCVVSFHSLEDRMVKGQF-------KEWA----KSCRCPREAVLCRCEGR 280
Query: 413 QIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
++ ++LT++ + P E+ N R RSA+LR ++K
Sbjct: 281 PLV-----RLLTRKAVRPDEREKERNPRSRSARLRAVEK 314
>gi|15806866|ref|NP_295589.1| S-adenosyl-methyltransferase MraW [Deinococcus radiodurans R1]
gi|20139273|sp|Q9RT99.1|RSMH_DEIRA RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|6459646|gb|AAF11419.1|AE002026_7 conserved hypothetical protein [Deinococcus radiodurans R1]
Length = 312
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 123/337 (36%), Positives = 169/337 (50%), Gaps = 57/337 (16%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA 174
SH+PV+ E+++ + + FVD TLG AGH+ ++ + G+D DP AL +A
Sbjct: 26 SHVPVLATEIVEALAPAPG-KVFVDGTLGGAGHTRLLLGRGATV---YGIDQDPYALDRA 81
Query: 175 RAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNN 234
R A P L H N+R + +L + VD IL+D+G+SS Q+++
Sbjct: 82 RQ--------AALPGL--HVLQGNYRDMAELLPAAGV----TQVDGILLDIGVSSFQLDD 127
Query: 235 PERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQA 294
RGFS + PLDMRM Q+ A D++N + E+ ++ EYGEE + + IVQA
Sbjct: 128 AGRGFSYHTEAPLDMRMS-QSGESAADVVNDLDETELAALIYEYGEERHSRRIARFIVQA 186
Query: 295 RLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACF 354
R + + +T +L ++I+ PG I A R FQALRI VNDEL L L A
Sbjct: 187 REKAPIETTVQLAEIIKRAYPGF----SKGIHPARRTFQALRIYVNDELGALRDGLSAAE 242
Query: 355 DCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQI 414
LAPGGRL VISFHSLEDRIVK+ L D +
Sbjct: 243 GLLAPGGRLAVISFHSLEDRIVKRFLLG--------------------SDVLTP------ 276
Query: 415 IQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
LTKRPI + E+ N R RSAKLRV ++
Sbjct: 277 --------LTKRPIVAAESEQVDNPRARSAKLRVGER 305
>gi|339489249|ref|YP_004703777.1| S-adenosyl-methyltransferase MraW [Pseudomonas putida S16]
gi|338840092|gb|AEJ14897.1| S-adenosyl-methyltransferase MraW [Pseudomonas putida S16]
Length = 315
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 127/344 (36%), Positives = 180/344 (52%), Gaps = 43/344 (12%)
Query: 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAII-RAHPELKLHIGVDVDPSALAK 173
+HI V+L E ++ + R ++D T G GHS I+ + P+ +L +G D DP A+A
Sbjct: 8 NHITVLLDEAVEALAL-RADGCYLDGTFGRGGHSRLILSKLGPQGRL-LGFDKDPQAIAT 65
Query: 174 ARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVN 233
GQA + F R + ++ E L V +L+DLG+SS Q++
Sbjct: 66 ----------GQALAA-EDGRFVIVQRSFAELGAEVAERGLDGKVSGVLLDLGVSSPQLD 114
Query: 234 NPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQ 293
+PERGFS L DGPLDMRM+P + A + + + P+ E+ RV +EYGEE + +VQ
Sbjct: 115 DPERGFSFLNDGPLDMRMNPDQGISAAEFIATAPEEEIARVFKEYGEERFAKRMARAVVQ 174
Query: 294 ARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIK---TATRVFQALRIAVNDELKTLESSL 350
R + TG+L ++++ P W K ATR FQ LRI VN+EL LE+ L
Sbjct: 175 RREQQPFTRTGDLAEVLKVANP-------AWEKGKNPATRAFQGLRIHVNNELGDLEAGL 227
Query: 351 HACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEEL-RNIR-DDNINE 408
A D L GGRL VISFHSLEDRIVK F+ R+ A+G + L RN+ + E
Sbjct: 228 EAAIDALEVGGRLAVISFHSLEDRIVK-LFM------RKLAKGEADNLPRNLPVQHKVFE 280
Query: 409 TWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
I K++ K A E + N R RSA +RV +K+
Sbjct: 281 PKI---------KLIGKAQFASDA-ELKANPRARSAVMRVAEKL 314
>gi|78187960|ref|YP_376003.1| methyltransferase [Chlorobium luteolum DSM 273]
gi|123582409|sp|Q3B121.1|RSMH_PELLD RecName: Full=Ribosomal RNA small subunit methyltransferase H;
AltName: Full=16S rRNA m(4)C1402 methyltransferase;
AltName: Full=rRNA (cytosine-N(4)-)-methyltransferase
RsmH
gi|78167862|gb|ABB24960.1| methyltransferase [Chlorobium luteolum DSM 273]
Length = 327
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 131/345 (37%), Positives = 182/345 (52%), Gaps = 36/345 (10%)
Query: 114 SSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHP-----ELKLHIGVDVDP 168
S H PV+L E +D R +VD TLG GHS AI+RA E L +G+D D
Sbjct: 7 SYHDPVLLHECVDALV--RGPGLYVDGTLGGGGHSMAILRALESGGWLEGSLLVGIDQDD 64
Query: 169 SALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLG-QIDENILRSGVDAILMDLGM 227
AL +A + L A+P + NF+ I + + + L AIL+DLG+
Sbjct: 65 EALHEAGSRL------AAYPG-RAVAVKGNFQDIARLASREAVQKGLEPRARAILLDLGV 117
Query: 228 SSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLL 287
SS Q++ ERGFS + GPLDMRMD AS A DILN + E+ + YGEE +
Sbjct: 118 SSRQIDRAERGFSYMRTGPLDMRMDSSASTTAADILNDADERELAAIFFRYGEEPRSRAI 177
Query: 288 QNKIVQARLR-GGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTL 346
++ AR++ G L ST +L D+++SV G RQ I++ +RVFQALRIAVN EL L
Sbjct: 178 ARAVIAARMKHGPLSSTEDLADIVRSVVHG----RQPSIRSLSRVFQALRIAVNRELDVL 233
Query: 347 ESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNI 406
+ L L GGR+ VIS+HSLEDR+VKQ F + ++ D
Sbjct: 234 QRVLEDGVSVLDEGGRIAVISYHSLEDRMVKQYFAA----------------QSKCDWGP 277
Query: 407 NETWIRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQK 451
+R+ + +T++ + S +E R+N R RSAKLRV +K
Sbjct: 278 KGVGLREPLSRGTLVPVTRKAVVASEDEVRVNPRSRSAKLRVAEK 322
>gi|392953120|ref|ZP_10318674.1| S-adenosyl-methyltransferase MraW [Hydrocarboniphaga effusa AP103]
gi|391858635|gb|EIT69164.1| S-adenosyl-methyltransferase MraW [Hydrocarboniphaga effusa AP103]
Length = 302
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 125/337 (37%), Positives = 179/337 (53%), Gaps = 41/337 (12%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H PVML E L + R ++D T G GHS+AI+ A + +D DP+A+A A
Sbjct: 5 HRPVMLDEALAGLAP-RPGGIYLDGTYGRGGHSNAILEAIGDSGFLHAMDQDPAAIAAA- 62
Query: 176 AHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235
N G+A+ + H +NF + + ++D L +D IL+DLG+SS Q ++
Sbjct: 63 ---NERFAGRAN--FRIHH--RNFGELGQLARELD---LVGRIDGILLDLGVSSPQFDDA 112
Query: 236 ERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQAR 295
+RGFS L DGPLDMRM+ A A + D E+ VL +YGEE + +IV+AR
Sbjct: 113 DRGFSFLRDGPLDMRMNTSAGEPASSWIARAKDNEIADVLYQYGEERASRRIARRIVEAR 172
Query: 296 LRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFD 355
+ + T +L ++I PG R + I ATR FQA+RI +N EL L +L A +
Sbjct: 173 TQTPITRTTQLAEIIARAMPGPRQK----IHPATRSFQAIRIYINRELDVLPQALGAAAE 228
Query: 356 CLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQII 415
LAPGGRL VISFHSLEDRIVK+ I +R+ A+G E + +R++
Sbjct: 229 VLAPGGRLAVISFHSLEDRIVKR----FIRDSRQTADGRRE----------TQVALRRVS 274
Query: 416 QGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
+ + P+ E +N R RSA LRV +K+
Sbjct: 275 RDF-----------PTDAECEINPRARSAVLRVAEKL 300
>gi|414564648|ref|YP_006043609.1| S-adenosyl-methyltransferase MraW [Streptococcus equi subsp.
zooepidemicus ATCC 35246]
gi|338847713|gb|AEJ25925.1| S-adenosyl-methyltransferase MraW [Streptococcus equi subsp.
zooepidemicus ATCC 35246]
Length = 316
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 120/342 (35%), Positives = 181/342 (52%), Gaps = 39/342 (11%)
Query: 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175
H+ V+L E +D+ + +VD TLG +GHS+ ++ + D D A+ A+
Sbjct: 7 HVTVLLHEAVDMLDI-KPDGIYVDATLGGSGHSAYLLSLLGDKGHLYCFDQDQKAIDHAQ 65
Query: 176 AHLNSLL-HGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGV---DAILMDLGMSSM 230
LN + GQ TF K NFRH+K+ L L GV D IL DLG+SS
Sbjct: 66 EQLNPYIDKGQV-------TFIKDNFRHLKARL-------LEHGVTEIDGILYDLGVSSP 111
Query: 231 QVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNK 290
Q++ ERGFS D PLDMRMD QA+L A +++N++ ++ R+ +YGE+ + K
Sbjct: 112 QLDERERGFSYKQDAPLDMRMDSQAALTAYEVVNTYDFNDLVRIFFKYGEDKFSKQIARK 171
Query: 291 IVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSL 350
I QAR + +T EL LI+S P +++G A ++FQA+RI VNDEL ++S+
Sbjct: 172 IEQARAIKPISTTTELAALIKSAKPAKELKKKGH--PAKQIFQAIRIEVNDELGAADASI 229
Query: 351 HACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETW 410
+ LA GR+ VI+FHSLEDR+ K F +E + + + D +
Sbjct: 230 QQAIELLALDGRISVITFHSLEDRLTKHLF-------KEASTADAPKGLPFIPDELKPKL 282
Query: 411 IRQIIQGWNGKILTKRPITPSAEEERLNCRCRSAKLRVIQKI 452
++++++PI PS +E N R SAKLRV +K+
Sbjct: 283 ----------ELVSRKPILPSQKELMANNRAHSAKLRVARKV 314
>gi|242373465|ref|ZP_04819039.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
M23864:W1]
gi|242348828|gb|EES40430.1| S-adenosyl-methyltransferase MraW [Staphylococcus epidermidis
M23864:W1]
Length = 304
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 119/331 (35%), Positives = 175/331 (52%), Gaps = 30/331 (9%)
Query: 120 MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLN 179
ML E +D + + + +VDCTLG AGH+ ++ + I +D D +A+ A+ L
Sbjct: 1 MLNETID-YLNIKEDGVYVDCTLGGAGHALYLLNQLNDEGRLIAIDQDLTAIENAKEVLK 59
Query: 180 SLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGF 239
LH H NFR + ++L ++ NI VD I DLG+SS Q++ PERGF
Sbjct: 60 EHLHKVTFVH-------NNFRELTNILKEL--NI--EKVDGIYYDLGVSSPQLDVPERGF 108
Query: 240 SVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLRGG 299
S D LDMRMD SL A +++N W + ++ YGEE + +I R +
Sbjct: 109 SYHHDAKLDMRMDQTQSLSAYEVVNEWSYEALVKIFYRYGEEKFSKQIARRIEANREQQP 168
Query: 300 LHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHACFDCLAP 359
+ +T +LVD+I+ P + RR+G A RVFQA+RIAVNDEL E S+ + +
Sbjct: 169 IETTLQLVDIIKEGIPA-KARRKGG-HPAKRVFQAIRIAVNDELSAFEDSIEQAIENVKV 226
Query: 360 GGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWN 419
GR+ VI+FHSLEDR+ KQ F ++ E E R + I E + ++
Sbjct: 227 NGRISVITFHSLEDRLCKQIF--------QEYEKGPEVPRGL--PIIPEAYSPKL----- 271
Query: 420 GKILTKRPITPSAEEERLNCRCRSAKLRVIQ 450
K + ++PIT + E+ N R RSAKLRV +
Sbjct: 272 -KRVNRKPITATEEDLDENNRARSAKLRVAE 301
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.134 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,897,232,866
Number of Sequences: 23463169
Number of extensions: 280891397
Number of successful extensions: 733673
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4200
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 716377
Number of HSP's gapped (non-prelim): 6435
length of query: 452
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 306
effective length of database: 8,933,572,693
effective search space: 2733673244058
effective search space used: 2733673244058
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 79 (35.0 bits)