Query 012954
Match_columns 452
No_of_seqs 155 out of 1388
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 19:27:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012954.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012954hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tka_A Ribosomal RNA small sub 100.0 1E-111 3E-116 854.0 27.0 307 114-452 39-345 (347)
2 1wg8_A Predicted S-adenosylmet 100.0 2E-107 8E-112 805.5 27.2 281 113-452 3-283 (285)
3 1m6y_A S-adenosyl-methyltransf 100.0 1.6E-87 5.5E-92 667.4 27.4 291 110-452 4-296 (301)
4 3eey_A Putative rRNA methylase 98.9 1.3E-08 4.4E-13 91.3 11.9 83 132-227 21-103 (197)
5 3m4x_A NOL1/NOP2/SUN family pr 98.5 8.1E-07 2.8E-11 92.9 15.0 108 101-229 80-187 (456)
6 2b9e_A NOL1/NOP2/SUN domain fa 98.5 2E-07 6.7E-12 92.5 8.7 92 126-230 96-187 (309)
7 1dus_A MJ0882; hypothetical pr 98.5 4E-06 1.4E-10 73.4 14.8 91 119-227 39-129 (194)
8 3mb5_A SAM-dependent methyltra 98.4 1.1E-06 3.9E-11 81.8 11.4 95 116-226 77-171 (255)
9 3mti_A RRNA methylase; SAM-dep 98.4 9.7E-07 3.3E-11 78.2 8.5 89 120-227 11-99 (185)
10 3e05_A Precorrin-6Y C5,15-meth 98.3 8.7E-06 3E-10 73.5 14.2 87 122-225 30-116 (204)
11 3hm2_A Precorrin-6Y C5,15-meth 98.3 1.2E-05 4.3E-10 69.9 13.1 88 120-223 13-100 (178)
12 1l3i_A Precorrin-6Y methyltran 98.2 2.5E-05 8.7E-10 68.1 13.0 88 119-224 20-107 (192)
13 3ajd_A Putative methyltransfer 98.2 9.5E-06 3.3E-10 77.9 11.1 93 126-230 77-169 (274)
14 1o54_A SAM-dependent O-methylt 98.1 1.5E-05 5E-10 75.9 12.0 90 120-225 100-189 (277)
15 3tma_A Methyltransferase; thum 98.1 3.1E-05 1.1E-09 76.7 13.8 95 117-227 188-282 (354)
16 1ixk_A Methyltransferase; open 98.0 1.7E-05 5.7E-10 78.1 10.3 90 126-231 112-201 (315)
17 3dtn_A Putative methyltransfer 98.0 2.3E-05 7.8E-10 71.7 10.1 88 119-225 30-117 (234)
18 2frn_A Hypothetical protein PH 98.0 1.9E-05 6.5E-10 76.0 9.2 77 132-225 124-200 (278)
19 3duw_A OMT, O-methyltransferas 98.0 2.6E-05 8.8E-10 71.2 9.6 96 122-226 47-142 (223)
20 2fhp_A Methylase, putative; al 97.9 5.5E-05 1.9E-09 66.3 10.6 96 118-225 29-124 (187)
21 3tr6_A O-methyltransferase; ce 97.9 2.7E-05 9.1E-10 71.0 8.9 96 122-225 53-148 (225)
22 3grz_A L11 mtase, ribosomal pr 97.9 7.3E-05 2.5E-09 67.3 11.5 75 132-225 59-133 (205)
23 3tfw_A Putative O-methyltransf 97.9 2.5E-05 8.7E-10 73.6 8.9 93 122-225 52-144 (248)
24 1jsx_A Glucose-inhibited divis 97.9 2.4E-05 8.1E-10 70.3 8.2 89 118-223 48-138 (207)
25 2esr_A Methyltransferase; stru 97.9 6.4E-05 2.2E-09 65.9 10.8 92 119-225 17-108 (177)
26 3m6w_A RRNA methylase; rRNA me 97.9 3.5E-05 1.2E-09 80.8 10.7 88 126-229 95-182 (464)
27 2frx_A Hypothetical protein YE 97.9 5.3E-05 1.8E-09 79.5 11.2 84 133-230 117-200 (479)
28 1ej0_A FTSJ; methyltransferase 97.8 0.00014 4.9E-09 61.9 11.3 88 121-228 10-99 (180)
29 1o9g_A RRNA methyltransferase; 97.8 4.8E-05 1.7E-09 71.1 9.0 60 120-181 39-100 (250)
30 2r6z_A UPF0341 protein in RSP 97.8 2.4E-05 8.2E-10 75.5 6.9 93 118-227 72-171 (258)
31 2pwy_A TRNA (adenine-N(1)-)-me 97.8 9.5E-05 3.3E-09 68.4 10.7 98 112-225 76-174 (258)
32 2b25_A Hypothetical protein; s 97.8 4.8E-05 1.6E-09 74.6 9.0 108 110-225 83-195 (336)
33 1sqg_A SUN protein, FMU protei 97.8 5.3E-05 1.8E-09 77.5 9.4 91 125-231 239-329 (429)
34 2oyr_A UPF0341 protein YHIQ; a 97.8 2.3E-05 7.8E-10 76.2 6.1 97 121-229 75-176 (258)
35 2yxl_A PH0851 protein, 450AA l 97.8 4.6E-05 1.6E-09 78.6 8.3 92 125-230 252-343 (450)
36 3ntv_A MW1564 protein; rossman 97.7 8.2E-05 2.8E-09 69.2 9.0 96 116-225 51-150 (232)
37 1i9g_A Hypothetical protein RV 97.7 0.0001 3.5E-09 69.5 9.7 99 112-225 79-179 (280)
38 3u81_A Catechol O-methyltransf 97.7 5.9E-05 2E-09 69.2 7.7 85 133-225 58-142 (221)
39 3njr_A Precorrin-6Y methylase; 97.7 0.00034 1.2E-08 64.0 12.5 87 121-225 44-130 (204)
40 3p9n_A Possible methyltransfer 97.7 0.00016 5.6E-09 64.4 10.0 91 120-225 29-121 (189)
41 4dzr_A Protein-(glutamine-N5) 97.7 6.7E-05 2.3E-09 66.7 6.8 97 118-227 15-111 (215)
42 2fca_A TRNA (guanine-N(7)-)-me 97.7 0.00037 1.3E-08 64.1 12.0 80 132-225 37-116 (213)
43 1ws6_A Methyltransferase; stru 97.7 0.00015 5.1E-09 62.4 8.6 92 119-225 26-118 (171)
44 2f8l_A Hypothetical protein LM 97.7 0.00012 4.2E-09 72.3 9.1 91 120-227 117-211 (344)
45 3c3y_A Pfomt, O-methyltransfer 97.6 0.00021 7.1E-09 67.0 10.0 85 133-224 70-154 (237)
46 3g5t_A Trans-aconitate 3-methy 97.6 0.0002 6.8E-09 68.5 10.0 118 97-226 3-122 (299)
47 2yxd_A Probable cobalt-precorr 97.6 0.00039 1.3E-08 60.1 11.0 91 115-225 18-108 (183)
48 3lbf_A Protein-L-isoaspartate 97.6 0.00043 1.5E-08 62.2 11.6 92 117-227 62-153 (210)
49 3dh0_A SAM dependent methyltra 97.6 0.00027 9.3E-09 63.7 10.2 89 121-225 26-114 (219)
50 1yzh_A TRNA (guanine-N(7)-)-me 97.6 0.00023 7.9E-09 64.8 9.4 86 123-224 33-118 (214)
51 3c3p_A Methyltransferase; NP_9 97.6 0.0001 3.5E-09 66.9 6.8 78 133-224 56-133 (210)
52 1g8a_A Fibrillarin-like PRE-rR 97.6 0.00015 5E-09 66.4 7.9 94 118-225 56-151 (227)
53 1xdz_A Methyltransferase GIDB; 97.6 0.00018 6E-09 67.0 8.5 78 133-223 70-147 (240)
54 2hnk_A SAM-dependent O-methylt 97.6 0.00025 8.6E-09 65.8 9.5 65 132-201 59-123 (239)
55 3lpm_A Putative methyltransfer 97.6 0.0002 6.7E-09 67.6 8.9 85 131-229 46-131 (259)
56 3r3h_A O-methyltransferase, SA 97.6 3.9E-05 1.3E-09 72.5 4.0 84 133-224 60-143 (242)
57 3dr5_A Putative O-methyltransf 97.6 0.00026 8.9E-09 66.1 9.5 81 134-225 57-137 (221)
58 3gdh_A Trimethylguanosine synt 97.6 0.00022 7.6E-09 65.7 8.9 90 121-228 66-155 (241)
59 4gek_A TRNA (CMO5U34)-methyltr 97.6 0.00028 9.5E-09 67.8 9.8 78 132-225 69-147 (261)
60 3dlc_A Putative S-adenosyl-L-m 97.5 0.00023 7.8E-09 63.4 8.5 95 114-226 26-120 (219)
61 2gpy_A O-methyltransferase; st 97.5 0.00026 8.7E-09 65.2 9.1 84 132-227 53-136 (233)
62 1yb2_A Hypothetical protein TA 97.5 0.00029 9.8E-09 67.1 9.4 92 116-224 94-186 (275)
63 2avd_A Catechol-O-methyltransf 97.5 0.00031 1.1E-08 64.0 9.0 85 132-224 68-152 (229)
64 3dou_A Ribosomal RNA large sub 97.5 0.0011 3.6E-08 60.6 12.4 84 121-225 13-99 (191)
65 4fzv_A Putative methyltransfer 97.5 0.00042 1.4E-08 70.4 10.5 94 126-229 142-235 (359)
66 4df3_A Fibrillarin-like rRNA/T 97.5 0.00017 5.7E-09 69.2 7.1 85 126-225 71-155 (233)
67 2ift_A Putative methylase HI07 97.5 0.00016 5.4E-09 65.9 6.4 94 120-226 40-134 (201)
68 2pbf_A Protein-L-isoaspartate 97.4 0.00061 2.1E-08 62.1 10.1 106 116-228 62-173 (227)
69 3cbg_A O-methyltransferase; cy 97.4 0.0004 1.4E-08 64.6 8.8 84 133-224 72-155 (232)
70 2yxe_A Protein-L-isoaspartate 97.4 0.00057 2E-08 61.7 9.5 97 116-228 61-157 (215)
71 3evz_A Methyltransferase; NYSG 97.4 0.0005 1.7E-08 62.7 8.8 81 132-229 54-135 (230)
72 3hem_A Cyclopropane-fatty-acyl 97.4 0.00075 2.6E-08 64.6 10.2 95 120-236 60-154 (302)
73 1sui_A Caffeoyl-COA O-methyltr 97.4 0.00052 1.8E-08 65.0 8.9 85 133-224 79-163 (247)
74 2h1r_A Dimethyladenosine trans 97.4 0.00027 9.1E-09 69.1 7.1 95 112-227 22-116 (299)
75 2ozv_A Hypothetical protein AT 97.4 0.00064 2.2E-08 64.6 9.6 88 131-227 34-125 (260)
76 3f4k_A Putative methyltransfer 97.4 0.00089 3.1E-08 61.8 10.3 95 116-226 29-123 (257)
77 2h00_A Methyltransferase 10 do 97.4 0.00031 1.1E-08 65.5 7.2 99 120-228 51-151 (254)
78 1r18_A Protein-L-isoaspartate( 97.4 0.00048 1.7E-08 63.2 8.3 96 117-227 67-173 (227)
79 1zq9_A Probable dimethyladenos 97.3 0.00065 2.2E-08 65.9 9.1 97 112-228 8-104 (285)
80 3g07_A 7SK snRNA methylphospha 97.3 0.00036 1.2E-08 67.3 7.1 61 120-181 32-93 (292)
81 1i1n_A Protein-L-isoaspartate 97.3 0.00075 2.6E-08 61.5 8.9 101 117-227 60-161 (226)
82 1jg1_A PIMT;, protein-L-isoasp 97.3 0.00089 3.1E-08 61.9 9.3 94 116-227 75-168 (235)
83 1fbn_A MJ fibrillarin homologu 97.3 0.00063 2.2E-08 62.8 8.2 86 121-222 60-148 (230)
84 3fpf_A Mtnas, putative unchara 97.3 0.0011 3.9E-08 65.8 10.5 91 116-226 107-197 (298)
85 2fpo_A Methylase YHHF; structu 97.3 0.00037 1.3E-08 63.4 6.4 90 120-225 41-130 (202)
86 3a27_A TYW2, uncharacterized p 97.3 0.0011 3.6E-08 63.7 9.9 93 116-225 102-194 (272)
87 2nyu_A Putative ribosomal RNA 97.3 0.0075 2.6E-07 53.2 14.7 83 123-225 12-105 (196)
88 1wy7_A Hypothetical protein PH 97.3 0.0016 5.6E-08 58.3 10.5 74 132-226 48-121 (207)
89 3dxy_A TRNA (guanine-N(7)-)-me 97.2 0.0014 4.8E-08 61.0 10.2 79 133-225 34-113 (218)
90 1dl5_A Protein-L-isoaspartate 97.2 0.00084 2.9E-08 65.5 9.0 97 116-228 59-155 (317)
91 2b3t_A Protein methyltransfera 97.2 0.0019 6.4E-08 61.4 11.2 90 119-227 97-186 (276)
92 3gru_A Dimethyladenosine trans 97.2 0.00077 2.6E-08 66.6 8.2 96 112-228 30-125 (295)
93 1uwv_A 23S rRNA (uracil-5-)-me 97.2 0.00075 2.6E-08 69.2 8.4 92 118-224 272-363 (433)
94 1vbf_A 231AA long hypothetical 97.2 0.0021 7E-08 58.6 10.4 91 116-227 54-144 (231)
95 3ckk_A TRNA (guanine-N(7)-)-me 97.2 0.0013 4.5E-08 61.9 9.3 85 132-224 45-130 (235)
96 2vdv_E TRNA (guanine-N(7)-)-me 97.1 0.001 3.5E-08 62.1 8.1 85 133-225 49-136 (246)
97 1nv8_A HEMK protein; class I a 97.1 0.0015 5E-08 63.4 9.5 91 119-228 110-203 (284)
98 3ll7_A Putative methyltransfer 97.1 0.0013 4.5E-08 68.0 9.7 80 133-229 93-175 (410)
99 3uwp_A Histone-lysine N-methyl 97.1 0.0035 1.2E-07 65.5 12.7 84 114-203 155-245 (438)
100 3k6r_A Putative transferase PH 97.1 0.0016 5.3E-08 63.9 9.5 99 115-230 107-205 (278)
101 3kkz_A Uncharacterized protein 97.1 0.0017 5.9E-08 60.7 9.3 95 117-227 30-124 (267)
102 3orh_A Guanidinoacetate N-meth 97.1 0.0011 3.7E-08 62.0 7.6 88 124-229 53-140 (236)
103 3gu3_A Methyltransferase; alph 97.1 0.0021 7E-08 61.2 9.5 92 118-226 7-98 (284)
104 1nkv_A Hypothetical protein YJ 97.0 0.0019 6.7E-08 59.4 8.9 90 116-223 20-109 (256)
105 1kpg_A CFA synthase;, cyclopro 97.0 0.0021 7.3E-08 60.6 9.3 86 120-225 52-137 (287)
106 2yvl_A TRMI protein, hypotheti 97.0 0.0034 1.2E-07 57.5 10.5 91 118-226 77-167 (248)
107 3tm4_A TRNA (guanine N2-)-meth 97.0 0.001 3.6E-08 66.8 7.5 93 118-227 204-296 (373)
108 2as0_A Hypothetical protein PH 97.0 0.0022 7.5E-08 64.6 9.7 90 122-225 208-297 (396)
109 2ipx_A RRNA 2'-O-methyltransfe 97.0 0.0015 5.1E-08 60.2 7.8 81 131-225 75-155 (233)
110 3jwg_A HEN1, methyltransferase 97.0 0.0015 5.1E-08 59.1 7.6 96 117-224 14-109 (219)
111 3opn_A Putative hemolysin; str 97.0 0.0011 3.9E-08 62.5 7.0 56 120-177 24-79 (232)
112 3c0k_A UPF0064 protein YCCW; P 97.0 0.0033 1.1E-07 63.4 10.8 83 133-226 220-302 (396)
113 1qam_A ERMC' methyltransferase 97.0 0.002 6.9E-08 60.9 8.6 79 112-202 10-88 (244)
114 3jwh_A HEN1; methyltransferase 97.0 0.0015 5.3E-08 59.0 7.4 96 117-224 14-109 (217)
115 3bt7_A TRNA (uracil-5-)-methyl 97.0 0.0035 1.2E-07 62.8 10.7 75 118-203 200-274 (369)
116 1wxx_A TT1595, hypothetical pr 97.0 0.0024 8.3E-08 64.1 9.6 85 125-224 202-286 (382)
117 1wzn_A SAM-dependent methyltra 97.0 0.0029 9.9E-08 58.3 9.3 84 120-224 29-112 (252)
118 1u2z_A Histone-lysine N-methyl 96.9 0.0058 2E-07 63.6 12.3 97 116-224 226-330 (433)
119 3vc1_A Geranyl diphosphate 2-C 96.9 0.0021 7.3E-08 61.9 8.4 87 122-224 106-192 (312)
120 2fk8_A Methoxy mycolic acid sy 96.9 0.003 1E-07 60.7 9.3 86 120-225 78-163 (318)
121 3id6_C Fibrillarin-like rRNA/T 96.9 0.0017 5.7E-08 62.1 7.4 96 116-225 57-154 (232)
122 3bus_A REBM, methyltransferase 96.9 0.0037 1.3E-07 58.3 9.5 90 119-225 48-137 (273)
123 1zx0_A Guanidinoacetate N-meth 96.8 0.0024 8.2E-08 58.9 7.6 85 122-224 51-135 (236)
124 3mgg_A Methyltransferase; NYSG 96.8 0.0048 1.6E-07 57.7 9.7 90 121-226 25-114 (276)
125 1nt2_A Fibrillarin-like PRE-rR 96.8 0.0048 1.7E-07 56.9 9.5 79 131-224 55-133 (210)
126 1vl5_A Unknown conserved prote 96.8 0.0045 1.6E-07 57.5 9.2 95 120-235 25-119 (260)
127 3tqs_A Ribosomal RNA small sub 96.8 0.002 6.9E-08 62.0 6.9 79 112-202 9-87 (255)
128 4htf_A S-adenosylmethionine-de 96.8 0.0051 1.8E-07 58.0 9.4 87 121-225 58-144 (285)
129 1ve3_A Hypothetical protein PH 96.7 0.0044 1.5E-07 55.7 8.5 83 120-224 28-110 (227)
130 2xvm_A Tellurite resistance pr 96.7 0.0051 1.7E-07 54.0 8.6 84 121-224 21-104 (199)
131 2o57_A Putative sarcosine dime 96.7 0.0043 1.5E-07 58.8 8.7 88 120-224 66-157 (297)
132 3fut_A Dimethyladenosine trans 96.7 0.0021 7.3E-08 62.6 6.7 94 112-227 27-120 (271)
133 3bkx_A SAM-dependent methyltra 96.7 0.0028 9.6E-08 59.1 7.2 101 120-235 31-138 (275)
134 2igt_A SAM dependent methyltra 96.7 0.0081 2.8E-07 59.7 10.7 81 133-225 153-233 (332)
135 3ujc_A Phosphoethanolamine N-m 96.7 0.003 1E-07 58.1 7.0 86 119-224 42-127 (266)
136 2qm3_A Predicted methyltransfe 96.7 0.0039 1.3E-07 62.5 8.2 78 133-225 172-249 (373)
137 3uzu_A Ribosomal RNA small sub 96.6 0.0034 1.2E-07 61.3 7.2 80 112-202 22-102 (279)
138 3m70_A Tellurite resistance pr 96.6 0.0049 1.7E-07 58.2 7.8 85 120-225 108-192 (286)
139 2ex4_A Adrenal gland protein A 96.5 0.0041 1.4E-07 57.3 6.9 76 133-225 79-154 (241)
140 1ne2_A Hypothetical protein TA 96.5 0.006 2E-07 54.5 7.8 70 132-226 50-119 (200)
141 3d2l_A SAM-dependent methyltra 96.5 0.0073 2.5E-07 54.8 8.4 86 116-225 19-104 (243)
142 4dcm_A Ribosomal RNA large sub 96.5 0.0097 3.3E-07 60.1 10.0 90 123-227 213-302 (375)
143 2kw5_A SLR1183 protein; struct 96.5 0.0097 3.3E-07 52.8 9.0 82 120-224 20-101 (202)
144 2p8j_A S-adenosylmethionine-de 96.5 0.0049 1.7E-07 54.9 6.7 88 119-224 9-96 (209)
145 3axs_A Probable N(2),N(2)-dime 96.5 0.0049 1.7E-07 63.2 7.6 81 132-225 51-133 (392)
146 2b78_A Hypothetical protein SM 96.5 0.0073 2.5E-07 61.0 8.8 80 133-224 212-292 (385)
147 1pjz_A Thiopurine S-methyltran 96.5 0.006 2E-07 55.5 7.4 80 120-203 10-95 (203)
148 1qyr_A KSGA, high level kasuga 96.4 0.01 3.5E-07 56.9 9.4 98 113-228 2-101 (252)
149 4dmg_A Putative uncharacterize 96.4 0.016 5.3E-07 59.2 10.8 85 122-226 205-289 (393)
150 3hnr_A Probable methyltransfer 96.4 0.005 1.7E-07 55.4 6.4 81 121-225 34-114 (220)
151 3ggd_A SAM-dependent methyltra 96.4 0.013 4.3E-07 53.8 9.3 78 132-225 55-132 (245)
152 1xxl_A YCGJ protein; structura 96.4 0.01 3.4E-07 54.8 8.6 87 120-225 9-95 (239)
153 2qe6_A Uncharacterized protein 96.4 0.021 7.4E-07 54.8 11.1 95 120-224 64-164 (274)
154 2yx1_A Hypothetical protein MJ 96.3 0.0092 3.1E-07 59.1 8.6 73 132-225 194-266 (336)
155 2p35_A Trans-aconitate 2-methy 96.3 0.0053 1.8E-07 56.5 6.4 85 118-225 19-103 (259)
156 3g5l_A Putative S-adenosylmeth 96.3 0.012 4.1E-07 54.2 8.7 84 121-225 33-116 (253)
157 2dul_A N(2),N(2)-dimethylguano 96.3 0.013 4.5E-07 59.5 9.7 78 133-225 47-139 (378)
158 3bgv_A MRNA CAP guanine-N7 met 96.3 0.0082 2.8E-07 57.7 7.6 61 119-181 19-80 (313)
159 3ldu_A Putative methylase; str 96.3 0.0089 3E-07 60.7 8.1 93 119-227 182-311 (385)
160 1xtp_A LMAJ004091AAA; SGPP, st 96.2 0.013 4.6E-07 53.6 8.5 82 122-223 83-164 (254)
161 1ri5_A MRNA capping enzyme; me 96.2 0.024 8.2E-07 53.0 10.4 79 132-225 63-141 (298)
162 3ocj_A Putative exported prote 96.2 0.0044 1.5E-07 59.5 5.4 77 132-224 117-194 (305)
163 3e8s_A Putative SAM dependent 96.2 0.0072 2.5E-07 53.9 6.4 95 113-228 33-127 (227)
164 3ofk_A Nodulation protein S; N 96.2 0.0068 2.3E-07 54.4 6.3 82 122-224 40-121 (216)
165 3ftd_A Dimethyladenosine trans 96.2 0.0036 1.2E-07 59.8 4.7 78 112-202 11-88 (249)
166 3bkw_A MLL3908 protein, S-aden 96.2 0.016 5.4E-07 52.6 8.8 83 121-224 32-114 (243)
167 3ou2_A SAM-dependent methyltra 96.2 0.015 5.2E-07 51.7 8.4 81 121-224 34-114 (218)
168 4fsd_A Arsenic methyltransfera 96.2 0.011 3.7E-07 59.2 8.2 89 132-227 82-176 (383)
169 3mq2_A 16S rRNA methyltransfer 96.2 0.0055 1.9E-07 55.4 5.5 80 119-202 14-93 (218)
170 3mcz_A O-methyltransferase; ad 96.1 0.012 4E-07 57.5 8.0 86 122-223 168-254 (352)
171 3g2m_A PCZA361.24; SAM-depende 96.1 0.011 3.8E-07 56.4 7.4 88 118-223 69-156 (299)
172 2yqz_A Hypothetical protein TT 96.1 0.015 5.1E-07 53.4 8.0 76 132-226 38-113 (263)
173 3sm3_A SAM-dependent methyltra 96.1 0.02 6.7E-07 51.4 8.6 91 118-224 18-108 (235)
174 3g89_A Ribosomal RNA small sub 96.1 0.018 6.1E-07 54.6 8.7 79 132-223 79-157 (249)
175 1y8c_A S-adenosylmethionine-de 96.1 0.017 5.9E-07 52.2 8.3 89 117-225 20-109 (246)
176 3dmg_A Probable ribosomal RNA 96.0 0.019 6.5E-07 58.3 9.3 89 120-227 219-308 (381)
177 3lcc_A Putative methyl chlorid 96.0 0.013 4.3E-07 53.6 7.2 85 120-224 55-139 (235)
178 3k0b_A Predicted N6-adenine-sp 96.0 0.012 4E-07 60.1 7.6 91 118-224 187-314 (393)
179 2i7c_A Spermidine synthase; tr 96.0 0.02 7E-07 55.2 8.9 82 133-225 78-159 (283)
180 1inl_A Spermidine synthase; be 96.0 0.016 5.5E-07 56.4 8.2 82 133-225 90-171 (296)
181 3iv6_A Putative Zn-dependent a 96.0 0.032 1.1E-06 54.0 10.2 63 114-180 27-89 (261)
182 2pt6_A Spermidine synthase; tr 96.0 0.017 5.9E-07 57.0 8.5 82 133-225 116-197 (321)
183 1uir_A Polyamine aminopropyltr 95.9 0.019 6.6E-07 56.3 8.5 83 133-225 77-159 (314)
184 1iy9_A Spermidine synthase; ro 95.9 0.017 5.9E-07 55.6 8.0 82 133-225 75-156 (275)
185 2pxx_A Uncharacterized protein 95.9 0.018 6.3E-07 50.9 7.4 75 132-225 41-115 (215)
186 3htx_A HEN1; HEN1, small RNA m 95.9 0.013 4.6E-07 65.9 7.8 95 120-224 709-803 (950)
187 3bwc_A Spermidine synthase; SA 95.9 0.024 8.1E-07 55.3 8.7 83 133-225 95-177 (304)
188 3lec_A NADB-rossmann superfami 95.9 0.022 7.5E-07 54.5 8.3 70 121-199 12-81 (230)
189 3ldg_A Putative uncharacterize 95.8 0.016 5.5E-07 59.0 7.7 90 119-224 181-307 (384)
190 1xj5_A Spermidine synthase 1; 95.8 0.025 8.6E-07 56.4 9.0 81 133-225 120-202 (334)
191 2bm8_A Cephalosporin hydroxyla 95.8 0.0035 1.2E-07 58.9 2.6 78 133-226 81-161 (236)
192 3giw_A Protein of unknown func 95.8 0.029 1E-06 55.2 9.2 80 121-207 66-148 (277)
193 3l8d_A Methyltransferase; stru 95.8 0.025 8.5E-07 51.4 8.1 82 119-224 42-123 (242)
194 3p2e_A 16S rRNA methylase; met 95.8 0.0076 2.6E-07 56.2 4.7 77 117-202 10-90 (225)
195 2p7i_A Hypothetical protein; p 95.8 0.016 5.6E-07 52.2 6.7 83 120-225 29-111 (250)
196 1mjf_A Spermidine synthase; sp 95.8 0.026 9E-07 54.3 8.5 81 133-225 75-160 (281)
197 3kr9_A SAM-dependent methyltra 95.8 0.025 8.5E-07 53.8 8.2 61 133-199 15-75 (225)
198 2fyt_A Protein arginine N-meth 95.7 0.036 1.2E-06 54.8 9.6 86 122-225 54-139 (340)
199 3cgg_A SAM-dependent methyltra 95.7 0.026 9E-07 48.8 7.6 78 122-224 37-114 (195)
200 1x19_A CRTF-related protein; m 95.7 0.028 9.5E-07 55.3 8.6 74 120-201 178-251 (359)
201 2o07_A Spermidine synthase; st 95.7 0.033 1.1E-06 54.6 9.1 80 133-225 95-176 (304)
202 1qzz_A RDMB, aclacinomycin-10- 95.7 0.043 1.5E-06 53.8 9.9 74 119-200 169-242 (374)
203 3ege_A Putative methyltransfer 95.7 0.012 4E-07 55.1 5.6 88 115-227 17-104 (261)
204 3gnl_A Uncharacterized protein 95.7 0.027 9.2E-07 54.4 8.2 70 121-199 12-81 (244)
205 2b2c_A Spermidine synthase; be 95.7 0.032 1.1E-06 55.1 8.9 80 133-225 108-189 (314)
206 3v97_A Ribosomal RNA large sub 95.6 0.03 1E-06 61.3 9.4 80 133-226 539-618 (703)
207 2nxc_A L11 mtase, ribosomal pr 95.6 0.035 1.2E-06 52.4 8.7 84 120-225 109-192 (254)
208 2r3s_A Uncharacterized protein 95.6 0.041 1.4E-06 52.9 9.1 85 121-223 152-238 (335)
209 3thr_A Glycine N-methyltransfe 95.5 0.038 1.3E-06 52.0 8.6 98 114-223 39-136 (293)
210 2jjq_A Uncharacterized RNA met 95.5 0.036 1.2E-06 57.1 9.0 81 119-224 280-360 (425)
211 1yub_A Ermam, rRNA methyltrans 95.5 0.0023 7.9E-08 60.0 -0.0 96 112-228 9-104 (245)
212 3e23_A Uncharacterized protein 95.5 0.022 7.5E-07 51.0 6.4 53 120-178 33-85 (211)
213 2pjd_A Ribosomal RNA small sub 95.5 0.018 6E-07 56.8 6.2 85 121-225 185-269 (343)
214 2ih2_A Modification methylase 95.4 0.0082 2.8E-07 59.8 3.7 85 118-228 25-109 (421)
215 3gjy_A Spermidine synthase; AP 95.4 0.031 1.1E-06 55.9 7.8 77 135-225 91-167 (317)
216 3adn_A Spermidine synthase; am 95.4 0.02 7E-07 56.0 6.4 83 133-225 83-165 (294)
217 3gwz_A MMCR; methyltransferase 95.4 0.056 1.9E-06 53.7 9.6 73 120-200 190-262 (369)
218 3i9f_A Putative type 11 methyl 95.4 0.034 1.2E-06 47.9 7.1 77 122-225 7-83 (170)
219 3q7e_A Protein arginine N-meth 95.4 0.044 1.5E-06 54.3 8.7 77 132-225 65-141 (349)
220 3dp7_A SAM-dependent methyltra 95.3 0.061 2.1E-06 53.3 9.5 86 123-224 170-255 (363)
221 3r0q_C Probable protein argini 95.2 0.044 1.5E-06 55.0 8.4 86 121-225 52-137 (376)
222 3q87_B N6 adenine specific DNA 95.2 0.03 1E-06 49.3 6.1 66 133-227 23-88 (170)
223 1tw3_A COMT, carminomycin 4-O- 95.0 0.074 2.5E-06 51.9 9.1 74 119-200 170-243 (360)
224 3hp7_A Hemolysin, putative; st 95.0 0.032 1.1E-06 55.1 6.4 89 121-228 73-162 (291)
225 3i53_A O-methyltransferase; CO 95.0 0.042 1.4E-06 53.3 7.2 70 123-200 160-229 (332)
226 2vdw_A Vaccinia virus capping 95.0 0.061 2.1E-06 52.5 8.4 47 133-181 48-94 (302)
227 3bzb_A Uncharacterized protein 95.0 0.094 3.2E-06 50.1 9.6 57 119-178 66-123 (281)
228 2gb4_A Thiopurine S-methyltran 95.0 0.058 2E-06 51.3 7.9 80 132-222 67-157 (252)
229 3pfg_A N-methyltransferase; N, 94.9 0.033 1.1E-06 51.7 6.0 43 133-178 50-92 (263)
230 2zig_A TTHA0409, putative modi 94.9 0.045 1.6E-06 53.0 7.1 64 113-181 216-280 (297)
231 2y1w_A Histone-arginine methyl 94.9 0.076 2.6E-06 52.5 8.8 85 121-224 39-123 (348)
232 1p91_A Ribosomal RNA large sub 94.8 0.041 1.4E-06 51.2 6.2 71 132-223 84-154 (269)
233 1g6q_1 HnRNP arginine N-methyl 94.7 0.078 2.7E-06 52.0 8.3 76 132-224 37-112 (328)
234 3h2b_A SAM-dependent methyltra 94.7 0.072 2.5E-06 47.2 7.3 70 133-225 41-110 (203)
235 3b3j_A Histone-arginine methyl 94.6 0.069 2.3E-06 55.8 8.0 86 120-224 146-231 (480)
236 3dli_A Methyltransferase; PSI- 94.5 0.085 2.9E-06 48.3 7.6 55 120-177 28-82 (240)
237 2okc_A Type I restriction enzy 94.4 0.059 2E-06 55.2 6.8 94 120-229 159-265 (445)
238 2ip2_A Probable phenazine-spec 94.4 0.059 2E-06 52.1 6.4 73 120-201 156-228 (334)
239 1g60_A Adenine-specific methyl 94.2 0.097 3.3E-06 49.7 7.5 64 113-181 193-257 (260)
240 3m33_A Uncharacterized protein 94.2 0.093 3.2E-06 47.9 7.0 83 117-224 34-118 (226)
241 2ar0_A M.ecoki, type I restric 94.0 0.15 5.1E-06 54.1 9.0 105 117-231 153-275 (541)
242 2plw_A Ribosomal RNA methyltra 93.8 0.072 2.5E-06 47.1 5.3 48 121-168 10-58 (201)
243 3ccf_A Cyclopropane-fatty-acyl 93.6 0.16 5.6E-06 47.5 7.7 84 117-225 42-125 (279)
244 1boo_A Protein (N-4 cytosine-s 93.5 0.098 3.4E-06 51.6 6.3 64 112-181 232-297 (323)
245 3cvo_A Methyltransferase-like 93.4 0.3 1E-05 45.7 9.2 59 133-198 30-88 (202)
246 3fzg_A 16S rRNA methylase; met 93.4 0.28 9.7E-06 46.3 8.9 59 121-183 40-98 (200)
247 3bxo_A N,N-dimethyltransferase 93.4 0.15 5E-06 46.0 6.7 43 133-178 40-82 (239)
248 4hg2_A Methyltransferase type 93.4 0.087 3E-06 50.4 5.4 68 133-224 39-106 (257)
249 4hc4_A Protein arginine N-meth 93.3 0.038 1.3E-06 56.4 2.9 75 133-225 83-157 (376)
250 2gs9_A Hypothetical protein TT 93.2 0.17 5.8E-06 45.0 6.7 77 121-224 26-102 (211)
251 3cc8_A Putative methyltransfer 93.1 0.15 5.2E-06 45.3 6.3 58 116-178 17-74 (230)
252 3v97_A Ribosomal RNA large sub 93.1 0.092 3.2E-06 57.4 5.8 94 118-224 176-310 (703)
253 2oxt_A Nucleoside-2'-O-methylt 92.9 0.02 6.9E-07 55.2 0.3 85 121-226 63-149 (265)
254 2wa2_A Non-structural protein 92.8 0.026 8.9E-07 54.8 0.9 85 121-226 71-157 (276)
255 2qfm_A Spermine synthase; sper 92.7 0.32 1.1E-05 49.6 8.8 85 133-225 188-275 (364)
256 4a6d_A Hydroxyindole O-methylt 92.6 0.26 9E-06 48.7 7.9 74 118-200 165-238 (353)
257 2cmg_A Spermidine synthase; tr 92.5 0.094 3.2E-06 50.3 4.4 75 133-224 72-146 (262)
258 2p41_A Type II methyltransfera 92.3 0.047 1.6E-06 53.6 2.0 85 121-229 71-160 (305)
259 2i62_A Nicotinamide N-methyltr 92.0 0.12 4.2E-06 47.3 4.2 47 132-180 55-101 (265)
260 1eg2_A Modification methylase 91.0 0.22 7.5E-06 49.4 5.2 65 112-182 222-291 (319)
261 2avn_A Ubiquinone/menaquinone 90.9 0.49 1.7E-05 43.9 7.2 53 121-178 44-96 (260)
262 4e2x_A TCAB9; kijanose, tetron 89.7 0.28 9.7E-06 48.9 4.8 59 115-177 90-148 (416)
263 2a14_A Indolethylamine N-methy 89.0 0.22 7.5E-06 46.7 3.2 47 132-180 54-100 (263)
264 3lkd_A Type I restriction-modi 88.0 0.8 2.7E-05 48.7 7.0 87 132-228 220-308 (542)
265 2g72_A Phenylethanolamine N-me 87.7 0.48 1.6E-05 44.7 4.6 58 121-180 58-116 (289)
266 3reo_A (ISO)eugenol O-methyltr 87.5 0.63 2.2E-05 46.1 5.6 67 120-200 190-256 (368)
267 4azs_A Methyltransferase WBDD; 87.3 2.2 7.6E-05 45.0 9.9 62 133-203 66-127 (569)
268 3o4f_A Spermidine synthase; am 87.3 1.2 4.1E-05 44.1 7.3 80 135-225 85-165 (294)
269 3p9c_A Caffeic acid O-methyltr 87.2 0.72 2.5E-05 45.7 5.8 67 120-200 188-254 (364)
270 3lst_A CALO1 methyltransferase 87.1 0.71 2.4E-05 45.1 5.6 69 121-199 173-241 (348)
271 3p8z_A Mtase, non-structural p 86.8 0.26 9E-06 48.2 2.2 90 121-230 67-157 (267)
272 3sso_A Methyltransferase; macr 86.5 1.4 4.9E-05 45.7 7.7 85 117-224 202-295 (419)
273 2aot_A HMT, histamine N-methyl 85.7 3.1 0.00011 39.2 9.1 99 132-239 51-155 (292)
274 3c6k_A Spermine synthase; sper 85.5 1.4 4.8E-05 45.2 6.9 83 135-225 207-292 (381)
275 3lkz_A Non-structural protein 85.4 0.82 2.8E-05 45.9 5.0 89 121-229 83-172 (321)
276 1fp1_D Isoliquiritigenin 2'-O- 85.0 1.1 3.8E-05 44.1 5.8 67 120-200 196-262 (372)
277 1i4w_A Mitochondrial replicati 84.7 3.1 0.0001 42.0 9.0 82 112-203 32-118 (353)
278 3s1s_A Restriction endonucleas 84.7 1.3 4.5E-05 49.8 6.7 89 133-229 321-411 (878)
279 3ufb_A Type I restriction-modi 83.6 1.6 5.3E-05 46.2 6.5 96 121-228 206-313 (530)
280 3frh_A 16S rRNA methylase; met 83.4 5.1 0.00017 39.0 9.5 83 133-238 105-187 (253)
281 3mti_A RRNA methylase; SAM-dep 82.2 0.95 3.2E-05 39.3 3.6 40 344-383 112-156 (185)
282 3khk_A Type I restriction-modi 82.1 0.48 1.6E-05 50.3 1.9 98 117-229 229-341 (544)
283 2py6_A Methyltransferase FKBM; 81.8 4.2 0.00014 41.3 8.7 50 132-181 225-275 (409)
284 3lcv_B Sisomicin-gentamicin re 81.5 2.3 7.9E-05 42.0 6.4 89 133-241 132-220 (281)
285 2wk1_A NOVP; transferase, O-me 81.0 2.4 8.3E-05 41.4 6.3 96 120-226 93-218 (282)
286 2qy6_A UPF0209 protein YFCK; s 78.3 2.9 9.8E-05 40.1 5.8 88 133-224 60-180 (257)
287 1af7_A Chemotaxis receptor met 77.3 2.9 0.0001 40.4 5.6 59 116-178 92-157 (274)
288 2oo3_A Protein involved in cat 75.3 1.2 4.2E-05 43.9 2.4 106 101-224 60-166 (283)
289 1fp2_A Isoflavone O-methyltran 74.8 2.3 8E-05 41.4 4.2 41 133-175 188-228 (352)
290 4auk_A Ribosomal RNA large sub 74.7 5.3 0.00018 40.9 6.9 45 121-168 192-243 (375)
291 4hg2_A Methyltransferase type 74.7 1.9 6.4E-05 41.0 3.4 36 347-382 115-155 (257)
292 1vlm_A SAM-dependent methyltra 73.2 2.4 8.3E-05 38.0 3.6 38 133-177 47-84 (219)
293 2plw_A Ribosomal RNA methyltra 70.3 3.9 0.00013 35.7 4.2 27 346-372 133-159 (201)
294 4gek_A TRNA (CMO5U34)-methyltr 68.0 3.5 0.00012 39.1 3.6 38 345-382 156-193 (261)
295 3t8y_A CHEB, chemotaxis respon 67.9 17 0.00059 30.5 7.7 73 143-228 10-82 (164)
296 2pxx_A Uncharacterized protein 67.2 3 0.0001 36.4 2.7 28 343-370 135-162 (215)
297 3evz_A Methyltransferase; NYSG 66.3 3.9 0.00013 36.7 3.4 30 342-371 154-183 (230)
298 4dzr_A Protein-(glutamine-N5) 66.0 2.7 9.1E-05 36.6 2.2 41 341-381 138-178 (215)
299 3ggd_A SAM-dependent methyltra 64.3 7.9 0.00027 34.9 5.1 35 345-379 141-175 (245)
300 3gcz_A Polyprotein; flavivirus 64.3 5.1 0.00018 39.5 4.0 46 121-168 79-124 (282)
301 2xvm_A Tellurite resistance pr 63.9 2.1 7.3E-05 37.0 1.1 28 345-372 114-141 (199)
302 1xxl_A YCGJ protein; structura 63.1 4.6 0.00016 36.7 3.2 37 346-382 103-139 (239)
303 2kw5_A SLR1183 protein; struct 61.8 5.8 0.0002 34.6 3.6 29 343-371 107-135 (202)
304 2xyq_A Putative 2'-O-methyl tr 59.1 4.2 0.00014 39.8 2.3 36 347-382 151-186 (290)
305 1zg3_A Isoflavanone 4'-O-methy 58.6 6.6 0.00023 38.3 3.7 50 123-175 182-233 (358)
306 1ixk_A Methyltransferase; open 58.0 8 0.00027 37.5 4.1 36 347-382 226-264 (315)
307 3njr_A Precorrin-6Y methylase; 57.7 13 0.00044 33.3 5.2 36 346-382 134-169 (204)
308 1pjz_A Thiopurine S-methyltran 57.4 6.6 0.00022 35.1 3.2 26 345-370 118-143 (203)
309 3imf_A Short chain dehydrogena 57.3 36 0.0012 31.2 8.4 80 140-228 11-94 (257)
310 3evf_A RNA-directed RNA polyme 56.5 10 0.00036 37.2 4.7 45 121-167 63-107 (277)
311 3o38_A Short chain dehydrogena 56.2 51 0.0017 30.1 9.2 77 143-229 34-113 (266)
312 2xyq_A Putative 2'-O-methyl tr 55.8 11 0.00038 36.8 4.7 64 131-225 61-131 (290)
313 1vl5_A Unknown conserved prote 55.4 7 0.00024 35.7 3.1 36 346-381 119-154 (260)
314 1sqg_A SUN protein, FMU protei 55.3 8.8 0.0003 38.8 4.1 37 347-383 354-393 (429)
315 2qm3_A Predicted methyltransfe 55.1 11 0.00038 37.3 4.7 36 346-381 256-296 (373)
316 2edu_A Kinesin-like protein KI 55.0 2 6.9E-05 35.2 -0.6 58 243-306 10-72 (98)
317 3ajd_A Putative methyltransfer 54.3 7.4 0.00025 36.7 3.1 37 346-382 190-229 (274)
318 2yxl_A PH0851 protein, 450AA l 54.3 6.5 0.00022 40.2 2.9 41 343-383 364-408 (450)
319 2g72_A Phenylethanolamine N-me 53.9 4.6 0.00016 37.8 1.6 29 339-367 187-215 (289)
320 1fmc_A 7 alpha-hydroxysteroid 53.8 67 0.0023 28.7 9.4 81 140-229 16-100 (255)
321 2a14_A Indolethylamine N-methy 53.8 5.8 0.0002 36.9 2.3 26 343-368 173-198 (263)
322 3hem_A Cyclopropane-fatty-acyl 53.8 8.2 0.00028 36.3 3.4 31 344-374 160-190 (302)
323 3sm3_A SAM-dependent methyltra 53.6 7 0.00024 34.5 2.7 27 345-371 119-145 (235)
324 3ou2_A SAM-dependent methyltra 53.4 6.1 0.00021 34.6 2.2 27 345-371 124-150 (218)
325 2gb4_A Thiopurine S-methyltran 52.7 5.5 0.00019 37.5 1.9 24 346-369 170-193 (252)
326 3ofk_A Nodulation protein S; N 52.4 6.8 0.00023 34.6 2.4 28 343-370 130-157 (216)
327 2zfu_A Nucleomethylin, cerebra 51.7 10 0.00034 33.5 3.4 43 121-169 55-97 (215)
328 3sju_A Keto reductase; short-c 51.7 57 0.002 30.4 8.9 81 140-229 29-113 (279)
329 3h7a_A Short chain dehydrogena 51.5 29 0.00099 31.9 6.7 80 140-229 12-95 (252)
330 3tfo_A Putative 3-oxoacyl-(acy 51.5 61 0.0021 30.2 9.0 80 140-228 9-92 (264)
331 3pk0_A Short-chain dehydrogena 51.4 63 0.0022 29.7 9.0 82 140-229 15-100 (262)
332 3eld_A Methyltransferase; flav 51.1 12 0.00041 37.3 4.1 46 121-168 70-115 (300)
333 2i62_A Nicotinamide N-methyltr 51.0 6.3 0.00021 35.7 2.0 29 340-368 171-199 (265)
334 3e8s_A Putative SAM dependent 51.0 6 0.0002 34.7 1.8 26 345-370 130-155 (227)
335 3gaf_A 7-alpha-hydroxysteroid 50.9 50 0.0017 30.3 8.2 81 140-229 17-101 (256)
336 2jah_A Clavulanic acid dehydro 50.9 61 0.0021 29.5 8.7 80 140-228 12-95 (247)
337 2aot_A HMT, histamine N-methyl 50.7 6.4 0.00022 37.0 2.0 25 345-369 150-174 (292)
338 3lpm_A Putative methyltransfer 50.6 11 0.00038 34.7 3.7 39 343-382 152-190 (259)
339 1g55_A DNA cytosine methyltran 50.5 21 0.00073 35.1 5.9 73 136-226 4-77 (343)
340 3lyl_A 3-oxoacyl-(acyl-carrier 50.3 69 0.0023 28.8 8.9 81 140-229 10-94 (247)
341 1yb1_A 17-beta-hydroxysteroid 50.3 68 0.0023 29.5 9.1 80 140-228 36-119 (272)
342 2ae2_A Protein (tropinone redu 50.2 70 0.0024 29.2 9.1 80 140-228 14-98 (260)
343 3o26_A Salutaridine reductase; 49.8 51 0.0017 30.3 8.1 82 140-229 17-103 (311)
344 2nxc_A L11 mtase, ribosomal pr 49.8 15 0.00051 34.2 4.4 38 345-382 196-233 (254)
345 3awd_A GOX2181, putative polyo 49.5 59 0.002 29.2 8.3 81 140-229 18-102 (260)
346 1wma_A Carbonyl reductase [NAD 49.4 99 0.0034 27.6 9.8 81 140-229 9-94 (276)
347 3dli_A Methyltransferase; PSI- 49.0 12 0.0004 33.8 3.5 26 345-370 118-143 (240)
348 1ae1_A Tropinone reductase-I; 49.0 73 0.0025 29.4 9.1 80 140-228 26-110 (273)
349 1ve3_A Hypothetical protein PH 48.9 9.4 0.00032 33.6 2.7 27 344-370 119-145 (227)
350 3v8b_A Putative dehydrogenase, 48.4 64 0.0022 30.2 8.7 81 140-229 33-117 (283)
351 3rkr_A Short chain oxidoreduct 48.1 77 0.0026 29.0 9.0 80 140-228 34-117 (262)
352 1zem_A Xylitol dehydrogenase; 47.9 66 0.0023 29.4 8.5 85 134-228 7-95 (262)
353 2rhc_B Actinorhodin polyketide 47.8 70 0.0024 29.6 8.8 80 140-228 27-110 (277)
354 4egf_A L-xylulose reductase; s 47.6 74 0.0025 29.3 8.8 81 140-229 25-110 (266)
355 3lf2_A Short chain oxidoreduct 47.4 75 0.0026 29.2 8.8 82 140-229 13-99 (265)
356 3rd5_A Mypaa.01249.C; ssgcid, 47.3 51 0.0018 30.7 7.8 77 140-229 21-98 (291)
357 2p8j_A S-adenosylmethionine-de 47.2 9 0.00031 33.4 2.3 26 344-369 105-130 (209)
358 3i9f_A Putative type 11 methyl 47.2 8.6 0.00029 32.5 2.1 25 346-370 91-115 (170)
359 1gee_A Glucose 1-dehydrogenase 47.1 90 0.0031 28.1 9.2 81 140-229 12-97 (261)
360 4fn4_A Short chain dehydrogena 46.9 70 0.0024 30.3 8.7 80 140-228 12-95 (254)
361 3bkw_A MLL3908 protein, S-aden 46.8 8.3 0.00028 34.4 2.1 26 345-370 122-147 (243)
362 3fpf_A Mtnas, putative unchara 46.8 14 0.00048 36.4 3.8 28 344-371 199-226 (298)
363 3g07_A 7SK snRNA methylphospha 46.6 10 0.00035 35.9 2.8 29 338-366 191-219 (292)
364 3m70_A Tellurite resistance pr 46.5 7.1 0.00024 36.3 1.6 28 345-372 201-228 (286)
365 3g2m_A PCZA361.24; SAM-depende 46.4 9.3 0.00032 35.9 2.4 27 344-370 167-193 (299)
366 3ujc_A Phosphoethanolamine N-m 46.3 9.1 0.00031 34.5 2.3 29 344-372 136-164 (266)
367 1xq1_A Putative tropinone redu 46.2 72 0.0025 28.9 8.4 81 140-228 19-103 (266)
368 2c07_A 3-oxoacyl-(acyl-carrier 46.2 1.3E+02 0.0046 27.7 10.5 81 140-229 49-133 (285)
369 3bgv_A MRNA CAP guanine-N7 met 46.1 13 0.00043 35.3 3.3 28 343-370 131-158 (313)
370 3hnr_A Probable methyltransfer 46.1 25 0.00087 30.8 5.1 23 347-369 125-147 (220)
371 3h2b_A SAM-dependent methyltra 46.0 6.9 0.00023 34.2 1.3 26 345-370 119-144 (203)
372 3lcc_A Putative methyl chlorid 45.9 6.9 0.00024 35.2 1.4 25 345-369 149-173 (235)
373 1xhl_A Short-chain dehydrogena 45.7 1.2E+02 0.0042 28.4 10.3 89 134-229 26-118 (297)
374 2gs9_A Hypothetical protein TT 45.6 9 0.00031 33.6 2.1 26 345-370 110-135 (211)
375 3qiv_A Short-chain dehydrogena 45.0 81 0.0028 28.4 8.6 80 140-228 14-97 (253)
376 2frx_A Hypothetical protein YE 45.0 15 0.0005 38.3 3.9 37 347-383 226-265 (479)
377 1zx0_A Guanidinoacetate N-meth 44.9 4.9 0.00017 36.5 0.2 28 344-371 147-174 (236)
378 1kpg_A CFA synthase;, cyclopro 44.8 15 0.00052 33.9 3.6 28 345-372 146-173 (287)
379 2fca_A TRNA (guanine-N(7)-)-me 44.8 26 0.00088 31.5 5.0 23 347-369 133-155 (213)
380 1xu9_A Corticosteroid 11-beta- 44.7 1.2E+02 0.004 28.0 9.8 81 140-228 33-118 (286)
381 3m6w_A RRNA methylase; rRNA me 44.6 12 0.0004 39.0 3.1 35 347-381 209-245 (464)
382 3pxx_A Carveol dehydrogenase; 44.6 68 0.0023 29.4 8.1 81 140-229 15-111 (287)
383 2pjd_A Ribosomal RNA small sub 44.3 15 0.00052 35.7 3.7 39 343-381 279-318 (343)
384 1ri5_A MRNA capping enzyme; me 44.2 11 0.00038 34.7 2.6 28 343-370 150-177 (298)
385 2zfu_A Nucleomethylin, cerebra 44.2 9.7 0.00033 33.6 2.0 25 346-370 130-154 (215)
386 2p41_A Type II methyltransfera 43.7 40 0.0014 32.6 6.6 23 348-370 172-194 (305)
387 3t4x_A Oxidoreductase, short c 43.6 1.1E+02 0.0036 28.2 9.2 78 140-228 15-96 (267)
388 4fzv_A Putative methyltransfer 43.5 9.6 0.00033 38.4 2.1 41 341-381 257-300 (359)
389 2cfc_A 2-(R)-hydroxypropyl-COM 43.4 88 0.003 27.9 8.5 81 140-229 7-92 (250)
390 3cxt_A Dehydrogenase with diff 43.2 76 0.0026 29.9 8.3 80 140-228 39-122 (291)
391 3ucx_A Short chain dehydrogena 43.1 93 0.0032 28.5 8.7 80 140-228 16-99 (264)
392 3e23_A Uncharacterized protein 43.0 12 0.0004 32.9 2.4 26 344-369 118-143 (211)
393 2qrv_A DNA (cytosine-5)-methyl 42.6 36 0.0012 33.2 6.0 45 133-177 15-59 (295)
394 1xg5_A ARPG836; short chain de 42.5 1.1E+02 0.0038 28.1 9.2 83 140-229 37-123 (279)
395 3g5l_A Putative S-adenosylmeth 42.4 11 0.00036 34.2 2.1 26 345-370 123-148 (253)
396 2qe6_A Uncharacterized protein 42.3 12 0.0004 35.5 2.4 29 340-370 171-199 (274)
397 2fk8_A Methoxy mycolic acid sy 42.3 15 0.00051 34.7 3.2 29 344-372 171-199 (318)
398 4fs3_A Enoyl-[acyl-carrier-pro 42.3 56 0.0019 30.2 7.1 77 146-230 19-99 (256)
399 3tjr_A Short chain dehydrogena 42.2 80 0.0027 29.8 8.3 80 140-228 36-119 (301)
400 1xkq_A Short-chain reductase f 42.0 96 0.0033 28.6 8.7 84 140-229 11-98 (280)
401 3thr_A Glycine N-methyltransfe 41.7 12 0.00041 34.7 2.4 26 344-369 152-177 (293)
402 3vc1_A Geranyl diphosphate 2-C 41.4 11 0.00036 35.9 2.0 25 346-370 200-224 (312)
403 2zat_A Dehydrogenase/reductase 41.4 98 0.0034 28.1 8.6 80 140-228 19-102 (260)
404 3l8d_A Methyltransferase; stru 41.3 12 0.0004 33.5 2.1 27 346-372 132-158 (242)
405 3cg0_A Response regulator rece 41.2 91 0.0031 24.5 7.4 55 159-227 10-64 (140)
406 3g5t_A Trans-aconitate 3-methy 41.2 11 0.00036 35.5 1.9 25 345-369 127-151 (299)
407 3svt_A Short-chain type dehydr 41.0 1.2E+02 0.0042 27.9 9.3 83 140-228 16-102 (281)
408 2ex4_A Adrenal gland protein A 40.9 13 0.00043 33.6 2.3 25 345-369 163-187 (241)
409 3sx2_A Putative 3-ketoacyl-(ac 40.7 1.1E+02 0.0036 28.1 8.8 81 140-229 18-114 (278)
410 3f6c_A Positive transcription 40.5 1E+02 0.0035 24.0 7.6 55 160-228 3-57 (134)
411 4g81_D Putative hexonate dehyd 40.4 83 0.0028 29.8 8.1 80 140-228 14-97 (255)
412 1tmy_A CHEY protein, TMY; chem 40.1 1E+02 0.0034 23.6 7.3 55 160-228 4-58 (120)
413 1geg_A Acetoin reductase; SDR 40.1 1E+02 0.0035 27.9 8.4 80 140-228 7-90 (256)
414 2c7p_A Modification methylase 40.0 49 0.0017 32.5 6.6 43 134-178 11-53 (327)
415 1xtp_A LMAJ004091AAA; SGPP, st 40.0 13 0.00046 33.3 2.3 25 344-368 174-198 (254)
416 3r1i_A Short-chain type dehydr 39.9 56 0.0019 30.5 6.7 87 133-229 31-121 (276)
417 3dh0_A SAM dependent methyltra 39.8 12 0.00043 32.8 2.1 26 346-371 122-147 (219)
418 3qv2_A 5-cytosine DNA methyltr 39.8 49 0.0017 32.6 6.6 44 135-178 11-55 (327)
419 1yzh_A TRNA (guanine-N(7)-)-me 39.8 35 0.0012 30.2 5.1 24 346-369 135-158 (214)
420 3bxo_A N,N-dimethyltransferase 39.8 9.9 0.00034 33.8 1.4 27 344-370 118-144 (239)
421 2pnf_A 3-oxoacyl-[acyl-carrier 39.6 1.2E+02 0.004 26.9 8.6 80 140-228 12-96 (248)
422 3i53_A O-methyltransferase; CO 39.5 22 0.00076 33.9 3.9 26 345-370 252-277 (332)
423 1x19_A CRTF-related protein; m 39.4 21 0.00071 34.6 3.7 27 344-370 272-298 (359)
424 3ai3_A NADPH-sorbose reductase 39.4 1.1E+02 0.0037 27.8 8.5 80 140-228 12-96 (263)
425 3ua3_A Protein arginine N-meth 39.3 51 0.0018 36.6 7.1 81 134-224 410-502 (745)
426 1vl8_A Gluconate 5-dehydrogena 39.1 1.2E+02 0.004 28.0 8.8 81 140-229 26-111 (267)
427 3t7c_A Carveol dehydrogenase; 39.1 1.1E+02 0.0038 28.6 8.8 81 140-229 33-129 (299)
428 4h0n_A DNMT2; SAH binding, tra 39.1 41 0.0014 33.2 5.9 42 136-177 5-46 (333)
429 3tox_A Short chain dehydrogena 39.0 77 0.0026 29.7 7.6 80 140-228 13-96 (280)
430 2i5h_A Hypothetical protein AF 38.9 22 0.00077 33.5 3.7 26 285-310 142-167 (205)
431 2efj_A 3,7-dimethylxanthine me 38.7 18 0.00062 36.9 3.3 43 344-386 202-251 (384)
432 4fc7_A Peroxisomal 2,4-dienoyl 38.5 1.5E+02 0.005 27.4 9.4 81 140-228 32-116 (277)
433 3uve_A Carveol dehydrogenase ( 38.5 1.2E+02 0.004 28.1 8.7 81 140-229 16-116 (286)
434 1iy8_A Levodione reductase; ox 38.2 1.2E+02 0.0041 27.7 8.7 83 140-229 18-104 (267)
435 3p9n_A Possible methyltransfer 37.9 27 0.00092 30.2 3.9 25 344-368 128-154 (189)
436 2ld4_A Anamorsin; methyltransf 37.8 11 0.00036 32.4 1.2 60 132-224 11-70 (176)
437 3i1j_A Oxidoreductase, short c 37.8 1.3E+02 0.0045 26.8 8.7 81 140-228 19-105 (247)
438 2bd0_A Sepiapterin reductase; 37.7 85 0.0029 27.9 7.4 80 140-228 7-97 (244)
439 3gl9_A Response regulator; bet 37.7 1.1E+02 0.0038 23.8 7.3 54 160-228 4-57 (122)
440 1ja9_A 4HNR, 1,3,6,8-tetrahydr 37.4 1.1E+02 0.0037 27.6 8.2 85 134-228 21-110 (274)
441 3eul_A Possible nitrate/nitrit 37.4 1.2E+02 0.0041 24.4 7.7 59 157-228 14-72 (152)
442 1nt2_A Fibrillarin-like PRE-rR 37.4 11 0.00038 34.1 1.4 24 346-369 140-163 (210)
443 4dmg_A Putative uncharacterize 37.3 32 0.0011 34.8 4.8 29 343-371 302-330 (393)
444 3lst_A CALO1 methyltransferase 37.2 24 0.00083 34.1 3.9 26 345-370 264-289 (348)
445 2p35_A Trans-aconitate 2-methy 37.1 15 0.0005 33.2 2.1 27 345-371 110-136 (259)
446 2p7i_A Hypothetical protein; p 37.0 13 0.00046 32.8 1.8 25 346-370 119-144 (250)
447 2z1n_A Dehydrogenase; reductas 37.0 1.2E+02 0.0041 27.5 8.4 81 140-228 12-96 (260)
448 3l77_A Short-chain alcohol deh 36.9 1.5E+02 0.0051 26.3 8.9 81 140-229 7-92 (235)
449 4da9_A Short-chain dehydrogena 36.8 1.2E+02 0.0041 28.2 8.5 81 140-229 34-119 (280)
450 2oxt_A Nucleoside-2'-O-methylt 36.8 31 0.0011 32.7 4.5 22 349-370 165-188 (265)
451 1mxh_A Pteridine reductase 2; 36.8 1.1E+02 0.0037 28.0 8.1 82 140-229 16-106 (276)
452 3cgg_A SAM-dependent methyltra 36.8 18 0.0006 30.7 2.5 26 345-370 125-150 (195)
453 3d2l_A SAM-dependent methyltra 36.6 17 0.00058 32.3 2.5 28 344-372 114-141 (243)
454 3ftp_A 3-oxoacyl-[acyl-carrier 36.3 1.2E+02 0.004 28.1 8.4 80 140-228 33-116 (270)
455 3sc4_A Short chain dehydrogena 36.2 88 0.003 29.2 7.5 80 140-228 14-104 (285)
456 3s55_A Putative short-chain de 36.2 1.4E+02 0.0047 27.5 8.8 81 140-229 15-111 (281)
457 3rih_A Short chain dehydrogena 36.2 76 0.0026 30.0 7.1 81 140-228 46-130 (293)
458 3ckk_A TRNA (guanine-N(7)-)-me 36.1 14 0.00046 34.3 1.8 24 347-370 148-171 (235)
459 3reo_A (ISO)eugenol O-methyltr 36.0 26 0.0009 34.4 3.9 26 345-370 278-303 (368)
460 3f9i_A 3-oxoacyl-[acyl-carrier 36.0 1.1E+02 0.0036 27.5 7.8 80 133-229 13-96 (249)
461 2ozv_A Hypothetical protein AT 35.8 24 0.00083 32.8 3.5 25 345-369 148-172 (260)
462 3p9c_A Caffeic acid O-methyltr 35.3 27 0.00094 34.3 3.9 27 344-370 275-301 (364)
463 3g7u_A Cytosine-specific methy 35.0 56 0.0019 32.7 6.2 75 136-225 4-79 (376)
464 3tsc_A Putative oxidoreductase 35.0 1.5E+02 0.005 27.3 8.8 81 140-229 16-113 (277)
465 3lte_A Response regulator; str 35.0 1.3E+02 0.0045 23.3 7.4 55 159-228 7-61 (132)
466 3pgx_A Carveol dehydrogenase; 35.0 1.4E+02 0.0049 27.4 8.7 81 140-229 20-117 (280)
467 4ibo_A Gluconate dehydrogenase 34.8 98 0.0034 28.7 7.5 101 114-228 10-114 (271)
468 3f6p_A Transcriptional regulat 34.8 1.4E+02 0.0047 23.1 7.4 54 160-228 4-57 (120)
469 3l6e_A Oxidoreductase, short-c 34.7 1.4E+02 0.0047 26.9 8.3 78 140-229 8-89 (235)
470 2gkg_A Response regulator homo 34.5 1.2E+02 0.0041 23.1 6.9 54 160-228 7-60 (127)
471 2vdv_E TRNA (guanine-N(7)-)-me 34.4 26 0.00089 32.0 3.4 23 347-369 153-175 (246)
472 3f4k_A Putative methyltransfer 34.3 15 0.00051 33.2 1.7 23 347-369 130-152 (257)
473 2avn_A Ubiquinone/menaquinone 34.2 17 0.00058 33.3 2.1 25 346-370 131-155 (260)
474 4htf_A S-adenosylmethionine-de 34.1 17 0.00058 33.7 2.1 25 346-370 152-176 (285)
475 2b3t_A Protein methyltransfera 34.1 25 0.00085 32.7 3.2 41 341-382 212-252 (276)
476 2vdw_A Vaccinia virus capping 34.1 14 0.00048 35.6 1.6 24 346-369 148-171 (302)
477 2qxy_A Response regulator; reg 34.0 1.3E+02 0.0043 23.8 7.2 53 159-227 5-57 (142)
478 1y8c_A S-adenosylmethionine-de 33.9 18 0.00062 32.0 2.2 27 344-371 119-145 (246)
479 1e7w_A Pteridine reductase; di 33.8 1.5E+02 0.005 27.7 8.6 81 140-229 14-117 (291)
480 2rjn_A Response regulator rece 33.8 1.3E+02 0.0044 24.3 7.3 55 159-228 8-62 (154)
481 3ioy_A Short-chain dehydrogena 33.7 1.4E+02 0.0049 28.3 8.7 83 140-229 13-99 (319)
482 1dz3_A Stage 0 sporulation pro 33.6 1.4E+02 0.0048 23.2 7.3 56 160-228 4-59 (130)
483 3dp7_A SAM-dependent methyltra 33.4 31 0.001 33.7 3.9 28 345-372 265-292 (363)
484 3orh_A Guanidinoacetate N-meth 33.4 12 0.00041 34.3 0.9 22 344-365 147-168 (236)
485 3pfg_A N-methyltransferase; N, 33.4 16 0.00054 33.3 1.7 23 344-366 128-150 (263)
486 3afn_B Carbonyl reductase; alp 33.2 86 0.0029 27.9 6.6 84 134-227 7-95 (258)
487 4dry_A 3-oxoacyl-[acyl-carrier 33.2 1.5E+02 0.0052 27.5 8.6 82 140-229 38-123 (281)
488 4imr_A 3-oxoacyl-(acyl-carrier 33.0 53 0.0018 30.7 5.3 84 134-228 33-120 (275)
489 3bus_A REBM, methyltransferase 33.0 16 0.00056 33.3 1.7 23 347-369 146-168 (273)
490 3kkz_A Uncharacterized protein 32.9 17 0.0006 33.2 1.9 24 346-369 129-152 (267)
491 1x1t_A D(-)-3-hydroxybutyrate 32.9 1.4E+02 0.0048 27.1 8.1 80 140-228 9-94 (260)
492 3hv2_A Response regulator/HD d 32.8 1.5E+02 0.0053 23.9 7.7 56 158-228 14-69 (153)
493 2qq5_A DHRS1, dehydrogenase/re 32.7 1.5E+02 0.0051 26.9 8.3 80 140-227 10-93 (260)
494 4iin_A 3-ketoacyl-acyl carrier 32.7 1.8E+02 0.0061 26.6 8.9 80 140-228 34-118 (271)
495 2igt_A SAM dependent methyltra 32.4 34 0.0012 33.5 4.0 40 343-382 248-289 (332)
496 3a28_C L-2.3-butanediol dehydr 32.3 98 0.0034 28.1 7.0 80 140-228 7-92 (258)
497 2wsb_A Galactitol dehydrogenas 32.3 1.6E+02 0.0054 26.2 8.3 77 140-229 16-97 (254)
498 4dmm_A 3-oxoacyl-[acyl-carrier 32.3 1.8E+02 0.0062 26.8 8.9 81 140-229 33-118 (269)
499 2qr3_A Two-component system re 32.1 1.2E+02 0.0041 23.7 6.7 55 159-228 4-58 (140)
500 3cnb_A DNA-binding response re 32.1 1.5E+02 0.0052 23.1 7.4 55 159-228 9-65 (143)
No 1
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=100.00 E-value=9.9e-112 Score=853.96 Aligned_cols=307 Identities=35% Similarity=0.515 Sum_probs=265.1
Q ss_pred CCccccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEE
Q 012954 114 SSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTH 193 (452)
Q Consensus 114 ~~H~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~ 193 (452)
+.|+|||++|+++.|. ++||++|||||||+||||.+||+++++.|+|||||+|++|++.|+ +| + ..|++
T Consensus 39 ~~H~pVLl~Evl~~L~-i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL--~-------~~Rv~ 107 (347)
T 3tka_A 39 YKHTTVLLDEAVNGLN-IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI--D-------DPRFS 107 (347)
T ss_dssp ---CCTTTHHHHHHTC-CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC--C-------CTTEE
T ss_pred CCcccccHHHHHHhhC-CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh--c-------CCcEE
Confidence 5699999999999998 579999999999999999999999887789999999999999994 55 2 13899
Q ss_pred EEccCcchHHHHHhhhcccccccCccEEEEccCCCccCCCCCCCCcccCCCCCCcccCCCCCCCCHHHHHhcCChHHHHH
Q 012954 194 TFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVGR 273 (452)
Q Consensus 194 li~~nF~~i~~~L~~~~~~l~~~~VDGILfDLGvSS~QLDd~~RGFSf~~dgPLDMRMD~~~~~tAadiLN~~se~eL~~ 273 (452)
++++||+++.+++.+.+. ...||||||||||||||||+++|||||+.|||||||||+++++||+||||+||++||++
T Consensus 108 lv~~nF~~l~~~L~~~g~---~~~vDgILfDLGVSS~QlD~~eRGFSf~~dgPLDMRMd~~~~~tAadvvn~~~e~eLa~ 184 (347)
T 3tka_A 108 IIHGPFSALGEYVAERDL---IGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDMRMDPTRGQSAAEWLQTAEEADIAW 184 (347)
T ss_dssp EEESCGGGHHHHHHHTTC---TTCEEEEEEECSCCHHHHHCGGGCCCSSSCCBSCCCSCTTSSCCHHHHHHHCCHHHHHH
T ss_pred EEeCCHHHHHHHHHhcCC---CCcccEEEECCccCHHHhcCCCCCCCCCCCCCcCCCCCCCCCCCHHHHHhhCCHHHHHH
Confidence 999999999999987652 12599999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCcchHHHHHHHHHHHhhCCCCcHHHHHHHHHhhCCCCcCCCCCccchhHHHHHHHHHHHHhhHHHHHHHHHHH
Q 012954 274 VLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHAC 353 (452)
Q Consensus 274 Ifr~YGEE~~A~rIA~aIv~~R~~~~i~TT~eLa~iI~~~~p~~~~~~~~~~hpATR~FQALRI~VN~EL~~L~~~L~~a 353 (452)
||++||||++|++||++||++|+.+||+||.||+++|++++|.. ..++||||||||||||+||+||++|+++|+++
T Consensus 185 Il~~YGEEr~a~rIA~aIv~~R~~~pi~tT~~La~ii~~a~p~~----~~~~hpAtrtFQALRI~VN~EL~~L~~~L~~a 260 (347)
T 3tka_A 185 VLKTYGEERFAKRIARAIVERNREQPMTRTKELAEVVAAATPVK----DKFKHPATRTFQAVRIWVNSELEEIEQALKSS 260 (347)
T ss_dssp HHHHHHCCTTHHHHHHHHHHHHHHSCCCBHHHHHHHHHHHSCCC--------CTTHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred HHHHhcCcchHHHHHHHHHHHHhcCCCCcHHHHHHHHHHhCCcc----ccCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999963 13579999999999999999999999999999
Q ss_pred HHhhcCCCeEEEEeecchhHHHHHHHHHhhhccCCCccCCchhhhhcccccCcchhHHHHHhhCCcceeecCCCCCCCHH
Q 012954 354 FDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSAE 433 (452)
Q Consensus 354 ~~~L~pGGRLvVISFHSLEDRIVK~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ltkKpi~Ps~e 433 (452)
+++|+|||||||||||||||||||+||++++..|. +|+.++.|.|.... ...+.++++|| |+||++
T Consensus 261 ~~~L~~gGRl~VISFHSLEDRiVK~~f~~~~~~~~-----~p~~~p~~~~~~~~-------~~~~~~~~i~k--i~ps~~ 326 (347)
T 3tka_A 261 LNVLAPGGRLSIISFHSLEDRIVKRFMRENSRGPQ-----VPAGLPMTEEQLKK-------LGGRQLRALGK--LMPGEE 326 (347)
T ss_dssp HHHEEEEEEEEEEESSHHHHHHHHHHHHHTTCC-------------------------------CCEEEEEE--ECCCHH
T ss_pred HHHhCCCCEEEEEecCchhHHHHHHHHHHhccCCC-----CCccCCcccccccc-------ccCcceeeecC--cCcCHH
Confidence 99999999999999999999999999999876543 34555554332100 00124678887 999999
Q ss_pred HHHhCcCccccccceeEeC
Q 012954 434 EERLNCRCRSAKLRVIQKI 452 (452)
Q Consensus 434 Ei~~NpRSRSAKLRv~eK~ 452 (452)
||+.||||||||||||||+
T Consensus 327 Ei~~NpRsRSAkLRvaek~ 345 (347)
T 3tka_A 327 EVAENPRARSSVLRIAERT 345 (347)
T ss_dssp HHHHCGGGTTCEEEEEEEC
T ss_pred HHHhCccccceeeeEEEec
Confidence 9999999999999999995
No 2
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=100.00 E-value=2.3e-107 Score=805.53 Aligned_cols=281 Identities=42% Similarity=0.638 Sum_probs=263.1
Q ss_pred CCCccccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceE
Q 012954 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKT 192 (452)
Q Consensus 113 ~~~H~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~ 192 (452)
.+.|+|||++|+++.|. ++++++|||||||+||||.+||++ .++|||||+||+|++.|++ |+. .|+
T Consensus 3 ~~~H~pVLl~e~le~L~-~~~gg~~VD~T~G~GGHS~~il~~---~g~VigiD~Dp~Ai~~A~~-L~~---------~rv 68 (285)
T 1wg8_A 3 PMTHVPVLYQEALDLLA-VRPGGVYVDATLGGAGHARGILER---GGRVIGLDQDPEAVARAKG-LHL---------PGL 68 (285)
T ss_dssp -CCCCCTTHHHHHHHHT-CCTTCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHH-TCC---------TTE
T ss_pred CCCchhHHHHHHHHhhC-CCCCCEEEEeCCCCcHHHHHHHHC---CCEEEEEeCCHHHHHHHHh-hcc---------CCE
Confidence 35699999999999998 579999999999999999999998 4689999999999999998 754 279
Q ss_pred EEEccCcchHHHHHhhhcccccccCccEEEEccCCCccCCCCCCCCcccCCCCCCcccCCCCCCCCHHHHHhcCChHHHH
Q 012954 193 HTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDAEVG 272 (452)
Q Consensus 193 ~li~~nF~~i~~~L~~~~~~l~~~~VDGILfDLGvSS~QLDd~~RGFSf~~dgPLDMRMD~~~~~tAadiLN~~se~eL~ 272 (452)
+++|+||++++++|.+.+ ...||||||||||||||||+++|||||+.||||||||| ++++||+||||+||++||+
T Consensus 69 ~lv~~~f~~l~~~L~~~g----~~~vDgIL~DLGvSS~Qld~~~RGFSf~~d~pLDMRMd-~~~~tA~~~vn~~~~~~L~ 143 (285)
T 1wg8_A 69 TVVQGNFRHLKRHLAALG----VERVDGILADLGVSSFHLDDPSRGFSYQKEGPLDMRMG-LEGPTAKEVVNRLPLEALA 143 (285)
T ss_dssp EEEESCGGGHHHHHHHTT----CSCEEEEEEECSCCHHHHHCGGGCCCSSSCCBSCCCSS-SCSCCHHHHHHHSCHHHHH
T ss_pred EEEECCcchHHHHHHHcC----CCCcCEEEeCCccccccccccccCccccCCCcchhhcC-CCCCcHHHHHhhCCHHHHH
Confidence 999999999999998765 24799999999999999999999999999999999999 8999999999999999999
Q ss_pred HHHHHhCCCcchHHHHHHHHHHHhhCCCCcHHHHHHHHHhhCCCCcCCCCCccchhHHHHHHHHHHHHhhHHHHHHHHHH
Q 012954 273 RVLREYGEESNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPGMRGRRQGWIKTATRVFQALRIAVNDELKTLESSLHA 352 (452)
Q Consensus 273 ~Ifr~YGEE~~A~rIA~aIv~~R~~~~i~TT~eLa~iI~~~~p~~~~~~~~~~hpATR~FQALRI~VN~EL~~L~~~L~~ 352 (452)
+||++||||++|++||++||++|+.+||+||.||+++|++++|. + ..+||||||||||||+||+||++|+.+|++
T Consensus 144 ~i~~~yGee~~a~~iA~~Iv~~R~~~pi~tt~~L~~ii~~~~p~-~----~~~hpatr~FQAlRI~VN~EL~~L~~~L~~ 218 (285)
T 1wg8_A 144 RLLRELGEEPQAYRIARAIVAAREKAPIETTTQLAEIVRKAVGF-R----RAGHPARKTFQALRIYVNDELNALKEFLEQ 218 (285)
T ss_dssp HHHHHHHCCTTHHHHHHHHHHHHHHSCCCBHHHHHHHHHHHHCC-C----SSSCTTHHHHHHHHHHHTTHHHHHHHHHHH
T ss_pred HHHHHhcCHhHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHcCC-C----CCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999995 1 236999999999999999999999999999
Q ss_pred HHHhhcCCCeEEEEeecchhHHHHHHHHHhhhccCCCccCCchhhhhcccccCcchhHHHHHhhCCcceeecCCCCCCCH
Q 012954 353 CFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRPITPSA 432 (452)
Q Consensus 353 a~~~L~pGGRLvVISFHSLEDRIVK~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ltkKpi~Ps~ 432 (452)
++++|+|||||+|||||||||||||+||++ | + ++++|+|||+||+
T Consensus 219 a~~~L~~gGrl~visfHSLEDRiVK~~~~~----~-----------------------------~--~~~~~~k~i~ps~ 263 (285)
T 1wg8_A 219 AAEVLAPGGRLVVIAFHSLEDRVVKRFLRE----S-----------------------------G--LKVLTKKPLVPSE 263 (285)
T ss_dssp HHHHEEEEEEEEEEECSHHHHHHHHHHHHH----H-----------------------------C--SEESCSSCBCCCH
T ss_pred HHHHhcCCCEEEEEecCcHHHHHHHHHHHh----C-----------------------------C--cccccCCCcCCCH
Confidence 999999999999999999999999999986 1 0 3679999999999
Q ss_pred HHHHhCcCccccccceeEeC
Q 012954 433 EEERLNCRCRSAKLRVIQKI 452 (452)
Q Consensus 433 eEi~~NpRSRSAKLRv~eK~ 452 (452)
+||+.||||||||||||||+
T Consensus 264 ~E~~~NpRsrSAkLR~~~r~ 283 (285)
T 1wg8_A 264 KEAAQNPRARSAKLRAAEKE 283 (285)
T ss_dssp HHHHHCGGGGGCEEEEEECC
T ss_pred HHHHhCCCccceeceEEEec
Confidence 99999999999999999985
No 3
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=100.00 E-value=1.6e-87 Score=667.39 Aligned_cols=291 Identities=41% Similarity=0.628 Sum_probs=266.3
Q ss_pred hcCCCCccccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCC
Q 012954 110 QQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPH 189 (452)
Q Consensus 110 ~~~~~~H~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~ 189 (452)
......|+|||++|+++.|. +.+++.|+|+|+|.||||.+|++.++ .++|+|+|+|++|++.|+++++.++
T Consensus 4 ~~~~~~h~pvLl~e~l~~L~-~~~g~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~~~~~g------- 74 (301)
T 1m6y_A 4 RKYSQRHIPVMVREVIEFLK-PEDEKIILDCTVGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKEFS------- 74 (301)
T ss_dssp CCSCSSCCCTTHHHHHHHHC-CCTTCEEEETTCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTGGGT-------
T ss_pred CCCCccccHHHHHHHHHhcC-CCCCCEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcC-------
Confidence 34456799999999999997 56899999999999999999999987 4689999999999999999988764
Q ss_pred ceEEEEccCcchHHHHHhhhcccccccCccEEEEccCCCccCCCCCCCCcccCCCCCCcccCCCCCCCCHHHHHhcCChH
Q 012954 190 LKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPQASLKAEDILNSWPDA 269 (452)
Q Consensus 190 ~r~~li~~nF~~i~~~L~~~~~~l~~~~VDGILfDLGvSS~QLDd~~RGFSf~~dgPLDMRMD~~~~~tAadiLN~~se~ 269 (452)
.++++++++|.++..++.+.+ ...+|+|++|+||||+|+|+++|||||+.|+|||||||+..++||++|||+|+++
T Consensus 75 ~~v~~v~~d~~~l~~~l~~~g----~~~~D~Vl~D~gvSs~qld~~~rgfs~~~d~pLdmrm~~~~~~ta~~~l~~~~~~ 150 (301)
T 1m6y_A 75 DRVSLFKVSYREADFLLKTLG----IEKVDGILMDLGVSTYQLKGENRGFTFEREEPLDMRMDLESEVTAQKVLNELPEE 150 (301)
T ss_dssp TTEEEEECCGGGHHHHHHHTT----CSCEEEEEEECSCCHHHHHTSCSCSSSSSCCBSCCCSSTTSSCCHHHHHHHSCHH
T ss_pred CcEEEEECCHHHHHHHHHhcC----CCCCCEEEEcCccchhhhcccccceEEeecccceeccCCccCccHHHHHhcCCHH
Confidence 279999999999988776543 1369999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCC-cchHHHHHHHHHHHhhCCCCcHHHHHHHHHhhCCC-CcCCCCCccchhHHHHHHHHHHHHhhHHHHH
Q 012954 270 EVGRVLREYGEE-SNWHLLQNKIVQARLRGGLHSTGELVDLIQSVTPG-MRGRRQGWIKTATRVFQALRIAVNDELKTLE 347 (452)
Q Consensus 270 eL~~Ifr~YGEE-~~A~rIA~aIv~~R~~~~i~TT~eLa~iI~~~~p~-~~~~~~~~~hpATR~FQALRI~VN~EL~~L~ 347 (452)
+|.+|++.|||| +++++||++|+++| ||+||.||+++|.+++|. .. ++..+||||||||||||+||+||++|+
T Consensus 151 ~L~~i~~~yGee~r~a~~ia~aIv~~r---pi~tt~~L~~ii~~~~p~~~~--~~~~~~pa~r~fQalRi~vn~el~~l~ 225 (301)
T 1m6y_A 151 ELARIIFEYGEEKRFARRIARKIVENR---PLNTTLDLVKAVREALPSYEI--RRRKRHFATKTFQAIRIYVNRELENLK 225 (301)
T ss_dssp HHHHHHHHTTCCTTTHHHHHHHHHHTC---SCCBHHHHHHHHHHHSCHHHH--HHCSSCTTHHHHHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHhCccHHHHHHHHHHHHHcC---CCCCHHHHHHHHHHHCCcccc--cccCCChHHHHHHHHHHHHhcCHHHHH
Confidence 999999999999 99999999999987 999999999999999985 21 123469999999999999999999999
Q ss_pred HHHHHHHHhhcCCCeEEEEeecchhHHHHHHHHHhhhccCCCccCCchhhhhcccccCcchhHHHHHhhCCcceeecCCC
Q 012954 348 SSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLSIIDHNREDAEGNEEELRNIRDDNINETWIRQIIQGWNGKILTKRP 427 (452)
Q Consensus 348 ~~L~~a~~~L~pGGRLvVISFHSLEDRIVK~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ltkKp 427 (452)
++|++++++|+|||||+|||||||||||||+||++ . + .++++||||
T Consensus 226 ~~l~~~~~~l~~ggr~~visfhsledr~vk~~~~~---~----~---------------------------~~~~~~~~~ 271 (301)
T 1m6y_A 226 EFLKKAEDLLNPGGRIVVISFHSLEDRIVKETFRN---S----K---------------------------KLRILTEKP 271 (301)
T ss_dssp HHHHHGGGGEEEEEEEEEEESSHHHHHHHHHHHHH---C----S---------------------------SEEESCSSC
T ss_pred HHHHHHHHhhCCCCEEEEEecCcHHHHHHHHHhhc---C----C---------------------------ceeeecCCC
Confidence 99999999999999999999999999999999986 0 0 146899999
Q ss_pred CCCCHHHHHhCcCccccccceeEeC
Q 012954 428 ITPSAEEERLNCRCRSAKLRVIQKI 452 (452)
Q Consensus 428 i~Ps~eEi~~NpRSRSAKLRv~eK~ 452 (452)
|+||++||+.||||||||||||||+
T Consensus 272 ~~~~~~e~~~n~r~rsa~lr~~~~~ 296 (301)
T 1m6y_A 272 VRPSEEEIRENPRARSGRLRAAERI 296 (301)
T ss_dssp BCCCHHHHHHCGGGTTCEEEEEEEC
T ss_pred CCCCHHHHHhCCcchhhhhheeeeh
Confidence 9999999999999999999999985
No 4
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=98.88 E-value=1.3e-08 Score=91.31 Aligned_cols=83 Identities=18% Similarity=0.270 Sum_probs=68.8
Q ss_pred CCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhcc
Q 012954 132 RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDE 211 (452)
Q Consensus 132 ~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~ 211 (452)
+++..++|...|.|+.+..+++.+++.+.|+|+|+++.+++.|+++++..+. ..+++++++++.++....
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~----- 90 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNL-----IDRVTLIKDGHQNMDKYI----- 90 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTC-----GGGEEEECSCGGGGGGTC-----
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCCeEEEECCHHHHhhhc-----
Confidence 5789999999999999999999875556899999999999999999877542 247999999987764322
Q ss_pred cccccCccEEEEccCC
Q 012954 212 NILRSGVDAILMDLGM 227 (452)
Q Consensus 212 ~l~~~~VDGILfDLGv 227 (452)
...+|.|++|+++
T Consensus 91 ---~~~fD~v~~~~~~ 103 (197)
T 3eey_A 91 ---DCPVKAVMFNLGY 103 (197)
T ss_dssp ---CSCEEEEEEEESB
T ss_pred ---cCCceEEEEcCCc
Confidence 2469999999988
No 5
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.55 E-value=8.1e-07 Score=92.93 Aligned_cols=108 Identities=11% Similarity=0.021 Sum_probs=82.6
Q ss_pred cCCchhhhhhcCCCCccccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhh
Q 012954 101 KDYDYESIIQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNS 180 (452)
Q Consensus 101 ~~~~~~~~~~~~~~~H~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~ 180 (452)
..|..+.+..++..... + ...|. ++++..++|++.|.||.|..|++.+++.+.|+|+|+|+.+++.++++++.
T Consensus 80 ~~~~~G~~~vQd~ss~l---~---~~~L~-~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r 152 (456)
T 3m4x_A 80 FLHQAGYEYSQEPSAMI---V---GTAAA-AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIER 152 (456)
T ss_dssp HHHHTTSCEECCTTTHH---H---HHHHC-CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHH
T ss_pred hHHhCCcEEEECHHHHH---H---HHHcC-CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHH
Confidence 34556655555544332 2 33444 46889999999999999999999988778999999999999999999988
Q ss_pred hccCCCCCCceEEEEccCcchHHHHHhhhcccccccCccEEEEccCCCc
Q 012954 181 LLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSS 229 (452)
Q Consensus 181 ~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~l~~~~VDGILfDLGvSS 229 (452)
++. .++.+++.+...+...+. ..+|.||+|--+|.
T Consensus 153 ~g~------~nv~v~~~Da~~l~~~~~--------~~FD~Il~DaPCSg 187 (456)
T 3m4x_A 153 WGV------SNAIVTNHAPAELVPHFS--------GFFDRIVVDAPCSG 187 (456)
T ss_dssp HTC------SSEEEECCCHHHHHHHHT--------TCEEEEEEECCCCC
T ss_pred cCC------CceEEEeCCHHHhhhhcc--------ccCCEEEECCCCCC
Confidence 764 268888888877654332 36999999988875
No 6
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.51 E-value=2e-07 Score=92.55 Aligned_cols=92 Identities=14% Similarity=0.088 Sum_probs=73.4
Q ss_pred hhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHH
Q 012954 126 DVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSV 205 (452)
Q Consensus 126 ~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~ 205 (452)
..|. ++++..++|++.|.||+|..|++.+++.++|+|+|+|+.+++.++++++.++. .++++++.++.++...
T Consensus 96 ~~l~-~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~------~~v~~~~~D~~~~~~~ 168 (309)
T 2b9e_A 96 MLLD-PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGV------SCCELAEEDFLAVSPS 168 (309)
T ss_dssp HHHC-CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTC------CSEEEEECCGGGSCTT
T ss_pred HHhC-CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC------CeEEEEeCChHhcCcc
Confidence 3444 46899999999999999999999876668899999999999999999988754 2688899988765321
Q ss_pred HhhhcccccccCccEEEEccCCCcc
Q 012954 206 LGQIDENILRSGVDAILMDLGMSSM 230 (452)
Q Consensus 206 L~~~~~~l~~~~VDGILfDLGvSS~ 230 (452)
... ...+|.||+|-.+|..
T Consensus 169 ~~~------~~~fD~Vl~D~PcSg~ 187 (309)
T 2b9e_A 169 DPR------YHEVHYILLDPSCSGS 187 (309)
T ss_dssp CGG------GTTEEEEEECCCCCC-
T ss_pred ccc------cCCCCEEEEcCCcCCC
Confidence 111 1369999999999875
No 7
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=98.46 E-value=4e-06 Score=73.36 Aligned_cols=91 Identities=9% Similarity=0.046 Sum_probs=68.6
Q ss_pred cchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccC
Q 012954 119 VMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKN 198 (452)
Q Consensus 119 VLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~n 198 (452)
-+...+++.+. ..++..++|...|.|..+..+++. ...++|+|+++.+++.|++++...+.. ..++++++.+
T Consensus 39 ~~~~~l~~~~~-~~~~~~vLdiG~G~G~~~~~~~~~---~~~v~~~D~~~~~~~~a~~~~~~~~~~----~~~~~~~~~d 110 (194)
T 1dus_A 39 KGTKILVENVV-VDKDDDILDLGCGYGVIGIALADE---VKSTTMADINRRAIKLAKENIKLNNLD----NYDIRVVHSD 110 (194)
T ss_dssp HHHHHHHHHCC-CCTTCEEEEETCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHHHHTTCT----TSCEEEEECS
T ss_pred hHHHHHHHHcc-cCCCCeEEEeCCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHcCCC----ccceEEEECc
Confidence 35677788886 458889999999999999998887 357999999999999999988765431 1148888887
Q ss_pred cchHHHHHhhhcccccccCccEEEEccCC
Q 012954 199 FRHIKSVLGQIDENILRSGVDAILMDLGM 227 (452)
Q Consensus 199 F~~i~~~L~~~~~~l~~~~VDGILfDLGv 227 (452)
+.+. +. ...+|.|++|..+
T Consensus 111 ~~~~---~~-------~~~~D~v~~~~~~ 129 (194)
T 1dus_A 111 LYEN---VK-------DRKYNKIITNPPI 129 (194)
T ss_dssp TTTT---CT-------TSCEEEEEECCCS
T ss_pred hhcc---cc-------cCCceEEEECCCc
Confidence 7542 11 2369999986543
No 8
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=98.44 E-value=1.1e-06 Score=81.82 Aligned_cols=95 Identities=9% Similarity=0.030 Sum_probs=74.0
Q ss_pred ccccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEE
Q 012954 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTF 195 (452)
Q Consensus 116 H~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li 195 (452)
-+|-....+++.+. ..++..++|+..|.|+.+..+++.+++.++|+|+|+++++++.|+++++.++. ..+++++
T Consensus 77 ~~~~~~~~i~~~~~-~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-----~~~v~~~ 150 (255)
T 3mb5_A 77 VHPKDAALIVAYAG-ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGF-----DDRVTIK 150 (255)
T ss_dssp CCHHHHHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTC-----TTTEEEE
T ss_pred ccHhHHHHHHHhhC-CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCC-----CCceEEE
Confidence 34555667777776 56889999999999999999999855456899999999999999999887754 2358899
Q ss_pred ccCcchHHHHHhhhcccccccCccEEEEccC
Q 012954 196 AKNFRHIKSVLGQIDENILRSGVDAILMDLG 226 (452)
Q Consensus 196 ~~nF~~i~~~L~~~~~~l~~~~VDGILfDLG 226 (452)
+.++.+. +. ...+|.|++|+.
T Consensus 151 ~~d~~~~---~~-------~~~~D~v~~~~~ 171 (255)
T 3mb5_A 151 LKDIYEG---IE-------EENVDHVILDLP 171 (255)
T ss_dssp CSCGGGC---CC-------CCSEEEEEECSS
T ss_pred ECchhhc---cC-------CCCcCEEEECCC
Confidence 9888632 21 236999998643
No 9
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=98.36 E-value=9.7e-07 Score=78.20 Aligned_cols=89 Identities=21% Similarity=0.269 Sum_probs=69.0
Q ss_pred chHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCc
Q 012954 120 MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNF 199 (452)
Q Consensus 120 Ll~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF 199 (452)
+.++++.... .++..++|..+|.|..+..+++. .++|+|+|+++.+++.|+++++..+. .+++++++++
T Consensus 11 ~~~~~l~~~~--~~~~~vLDiGcG~G~~~~~la~~---~~~v~~vD~s~~~l~~a~~~~~~~~~------~~v~~~~~~~ 79 (185)
T 3mti_A 11 MSHDFLAEVL--DDESIVVDATMGNGNDTAFLAGL---SKKVYAFDVQEQALGKTSQRLSDLGI------ENTELILDGH 79 (185)
T ss_dssp HHHHHHHTTC--CTTCEEEESCCTTSHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHHTC------CCEEEEESCG
T ss_pred HHHHHHHHhC--CCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCC------CcEEEEeCcH
Confidence 4455555442 47899999999999999998876 36799999999999999999887643 3688888888
Q ss_pred chHHHHHhhhcccccccCccEEEEccCC
Q 012954 200 RHIKSVLGQIDENILRSGVDAILMDLGM 227 (452)
Q Consensus 200 ~~i~~~L~~~~~~l~~~~VDGILfDLGv 227 (452)
..+..+. ...+|.|++|+|+
T Consensus 80 ~~l~~~~--------~~~fD~v~~~~~~ 99 (185)
T 3mti_A 80 ENLDHYV--------REPIRAAIFNLGY 99 (185)
T ss_dssp GGGGGTC--------CSCEEEEEEEEC-
T ss_pred HHHHhhc--------cCCcCEEEEeCCC
Confidence 7754332 1369999999876
No 10
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=98.33 E-value=8.7e-06 Score=73.46 Aligned_cols=87 Identities=14% Similarity=0.097 Sum_probs=66.8
Q ss_pred HHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcch
Q 012954 122 GEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRH 201 (452)
Q Consensus 122 ~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~ 201 (452)
..+++.+. ..++..++|.-.|.|..+..+++..|. .+|+|+|+++.+++.|+++++.++. .++.++++++.+
T Consensus 30 ~~~l~~l~-~~~~~~vLDiG~G~G~~~~~la~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~------~~v~~~~~d~~~ 101 (204)
T 3e05_A 30 AVTLSKLR-LQDDLVMWDIGAGSASVSIEASNLMPN-GRIFALERNPQYLGFIRDNLKKFVA------RNVTLVEAFAPE 101 (204)
T ss_dssp HHHHHHTT-CCTTCEEEEETCTTCHHHHHHHHHCTT-SEEEEEECCHHHHHHHHHHHHHHTC------TTEEEEECCTTT
T ss_pred HHHHHHcC-CCCCCEEEEECCCCCHHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHHHHHhCC------CcEEEEeCChhh
Confidence 45567775 468899999999999999999988765 5799999999999999998877643 268888887743
Q ss_pred HHHHHhhhcccccccCccEEEEcc
Q 012954 202 IKSVLGQIDENILRSGVDAILMDL 225 (452)
Q Consensus 202 i~~~L~~~~~~l~~~~VDGILfDL 225 (452)
. +.. ...+|.|+.+.
T Consensus 102 ~---~~~------~~~~D~i~~~~ 116 (204)
T 3e05_A 102 G---LDD------LPDPDRVFIGG 116 (204)
T ss_dssp T---CTT------SCCCSEEEESC
T ss_pred h---hhc------CCCCCEEEECC
Confidence 2 111 13588888663
No 11
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=98.26 E-value=1.2e-05 Score=69.91 Aligned_cols=88 Identities=8% Similarity=0.151 Sum_probs=65.2
Q ss_pred chHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCc
Q 012954 120 MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNF 199 (452)
Q Consensus 120 Ll~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF 199 (452)
+...+++.+. ..++..++|.-.|.|..+..+++.++. .+|+|+|+++.+++.|++++..++. ..++ +++++.
T Consensus 13 ~~~~~~~~~~-~~~~~~vldiG~G~G~~~~~l~~~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~~-~~~~d~ 84 (178)
T 3hm2_A 13 VRALAISALA-PKPHETLWDIGGGSGSIAIEWLRSTPQ-TTAVCFEISEERRERILSNAINLGV-----SDRI-AVQQGA 84 (178)
T ss_dssp HHHHHHHHHC-CCTTEEEEEESTTTTHHHHHHHTTSSS-EEEEEECSCHHHHHHHHHHHHTTTC-----TTSE-EEECCT
T ss_pred HHHHHHHHhc-ccCCCeEEEeCCCCCHHHHHHHHHCCC-CeEEEEeCCHHHHHHHHHHHHHhCC-----CCCE-EEecch
Confidence 4456677775 467889999999999999999988865 5799999999999999998877643 1256 666665
Q ss_pred chHHHHHhhhcccccccCccEEEE
Q 012954 200 RHIKSVLGQIDENILRSGVDAILM 223 (452)
Q Consensus 200 ~~i~~~L~~~~~~l~~~~VDGILf 223 (452)
.+ .+... ...+|.|+.
T Consensus 85 ~~---~~~~~-----~~~~D~i~~ 100 (178)
T 3hm2_A 85 PR---AFDDV-----PDNPDVIFI 100 (178)
T ss_dssp TG---GGGGC-----CSCCSEEEE
T ss_pred Hh---hhhcc-----CCCCCEEEE
Confidence 32 22221 146999985
No 12
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.17 E-value=2.5e-05 Score=68.06 Aligned_cols=88 Identities=13% Similarity=0.131 Sum_probs=65.8
Q ss_pred cchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccC
Q 012954 119 VMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKN 198 (452)
Q Consensus 119 VLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~n 198 (452)
.+...+++.+. ..++..++|...|.|..+..+++.. ..|+|+|.++.+++.|+++++.++. ..++.+++.+
T Consensus 20 ~~~~~~~~~~~-~~~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~-----~~~~~~~~~d 90 (192)
T 1l3i_A 20 EVRCLIMCLAE-PGKNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGL-----GDNVTLMEGD 90 (192)
T ss_dssp HHHHHHHHHHC-CCTTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTC-----CTTEEEEESC
T ss_pred HHHHHHHHhcC-CCCCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCC-----CcceEEEecC
Confidence 34555666665 4688899999999999999888766 5799999999999999998876643 1367788877
Q ss_pred cchHHHHHhhhcccccccCccEEEEc
Q 012954 199 FRHIKSVLGQIDENILRSGVDAILMD 224 (452)
Q Consensus 199 F~~i~~~L~~~~~~l~~~~VDGILfD 224 (452)
+.. .+... ..+|.|+.+
T Consensus 91 ~~~---~~~~~------~~~D~v~~~ 107 (192)
T 1l3i_A 91 APE---ALCKI------PDIDIAVVG 107 (192)
T ss_dssp HHH---HHTTS------CCEEEEEES
T ss_pred HHH---hcccC------CCCCEEEEC
Confidence 654 23221 268888875
No 13
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.16 E-value=9.5e-06 Score=77.89 Aligned_cols=93 Identities=17% Similarity=0.193 Sum_probs=72.9
Q ss_pred hhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHH
Q 012954 126 DVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSV 205 (452)
Q Consensus 126 ~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~ 205 (452)
..|. +.++..++|+..|.||.|..+++.+++.++|+|+|+++.+++.++++++.++. .++++++.+..++...
T Consensus 77 ~~l~-~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~------~~v~~~~~D~~~~~~~ 149 (274)
T 3ajd_A 77 IVLN-PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGV------LNTIIINADMRKYKDY 149 (274)
T ss_dssp HHHC-CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTC------CSEEEEESCHHHHHHH
T ss_pred HHhC-CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCC------CcEEEEeCChHhcchh
Confidence 3444 46889999999999999999999887767899999999999999999887653 2688899988776543
Q ss_pred HhhhcccccccCccEEEEccCCCcc
Q 012954 206 LGQIDENILRSGVDAILMDLGMSSM 230 (452)
Q Consensus 206 L~~~~~~l~~~~VDGILfDLGvSS~ 230 (452)
+... ...+|.|+.|.=+|..
T Consensus 150 ~~~~-----~~~fD~Vl~d~Pcs~~ 169 (274)
T 3ajd_A 150 LLKN-----EIFFDKILLDAPCSGN 169 (274)
T ss_dssp HHHT-----TCCEEEEEEEECCC--
T ss_pred hhhc-----cccCCEEEEcCCCCCC
Confidence 3211 1369999999777654
No 14
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.15 E-value=1.5e-05 Score=75.93 Aligned_cols=90 Identities=11% Similarity=0.104 Sum_probs=70.2
Q ss_pred chHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCc
Q 012954 120 MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNF 199 (452)
Q Consensus 120 Ll~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF 199 (452)
....+++.+. ..++..++|+-.|.|..+..+++.+++.++|+++|+++.+++.|+++++.++. ..++.+++.++
T Consensus 100 ~~~~i~~~~~-~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~ 173 (277)
T 1o54_A 100 DSSFIAMMLD-VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGL-----IERVTIKVRDI 173 (277)
T ss_dssp HHHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTC-----GGGEEEECCCG
T ss_pred HHHHHHHHhC-CCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC-----CCCEEEEECCH
Confidence 3456777776 46889999999999999999999865556899999999999999998877642 13688888887
Q ss_pred chHHHHHhhhcccccccCccEEEEcc
Q 012954 200 RHIKSVLGQIDENILRSGVDAILMDL 225 (452)
Q Consensus 200 ~~i~~~L~~~~~~l~~~~VDGILfDL 225 (452)
.+. +. ...+|.|++|+
T Consensus 174 ~~~---~~-------~~~~D~V~~~~ 189 (277)
T 1o54_A 174 SEG---FD-------EKDVDALFLDV 189 (277)
T ss_dssp GGC---CS-------CCSEEEEEECC
T ss_pred HHc---cc-------CCccCEEEECC
Confidence 653 21 23699999854
No 15
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.10 E-value=3.1e-05 Score=76.69 Aligned_cols=95 Identities=18% Similarity=0.092 Sum_probs=72.4
Q ss_pred cccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEc
Q 012954 117 IPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196 (452)
Q Consensus 117 ~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~ 196 (452)
.|.|...++..+. ..++..++|..+|.|..+..++...++...++|+|+|+.+++.|+++++..+. .++++++
T Consensus 188 ~~~la~~l~~~~~-~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~------~~i~~~~ 260 (354)
T 3tma_A 188 TPVLAQALLRLAD-ARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGL------SWIRFLR 260 (354)
T ss_dssp CHHHHHHHHHHTT-CCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTC------TTCEEEE
T ss_pred CHHHHHHHHHHhC-CCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCC------CceEEEe
Confidence 3445666666665 56888999999999999999998762335699999999999999999887653 1678889
Q ss_pred cCcchHHHHHhhhcccccccCccEEEEccCC
Q 012954 197 KNFRHIKSVLGQIDENILRSGVDAILMDLGM 227 (452)
Q Consensus 197 ~nF~~i~~~L~~~~~~l~~~~VDGILfDLGv 227 (452)
.++.++.. . ...+|.|+.|.=|
T Consensus 261 ~D~~~~~~---~------~~~~D~Ii~npPy 282 (354)
T 3tma_A 261 ADARHLPR---F------FPEVDRILANPPH 282 (354)
T ss_dssp CCGGGGGG---T------CCCCSEEEECCCS
T ss_pred CChhhCcc---c------cCCCCEEEECCCC
Confidence 98876521 1 1247999998766
No 16
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.04 E-value=1.7e-05 Score=78.14 Aligned_cols=90 Identities=20% Similarity=0.223 Sum_probs=72.7
Q ss_pred hhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHH
Q 012954 126 DVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSV 205 (452)
Q Consensus 126 ~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~ 205 (452)
..|. ++++..++|+..|.||.|..+++.+++.++|+|+|+++.+++.++++++.++. .++++++.++..+..
T Consensus 112 ~~l~-~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~------~~v~~~~~D~~~~~~- 183 (315)
T 1ixk_A 112 VALD-PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGV------LNVILFHSSSLHIGE- 183 (315)
T ss_dssp HHHC-CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTC------CSEEEESSCGGGGGG-
T ss_pred HHhC-CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCC------CeEEEEECChhhccc-
Confidence 4444 46889999999999999999999987767899999999999999999987753 268889988876532
Q ss_pred HhhhcccccccCccEEEEccCCCccC
Q 012954 206 LGQIDENILRSGVDAILMDLGMSSMQ 231 (452)
Q Consensus 206 L~~~~~~l~~~~VDGILfDLGvSS~Q 231 (452)
. ...+|.|++|.-+|...
T Consensus 184 ---~-----~~~fD~Il~d~Pcsg~g 201 (315)
T 1ixk_A 184 ---L-----NVEFDKILLDAPCTGSG 201 (315)
T ss_dssp ---G-----CCCEEEEEEECCTTSTT
T ss_pred ---c-----cccCCEEEEeCCCCCcc
Confidence 1 13699999997776543
No 17
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.02 E-value=2.3e-05 Score=71.70 Aligned_cols=88 Identities=17% Similarity=0.229 Sum_probs=67.8
Q ss_pred cchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccC
Q 012954 119 VMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKN 198 (452)
Q Consensus 119 VLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~n 198 (452)
-+.+.+++.+....++..++|.-.|.|..+..+++.+|. ..++|+|.++.+++.|++++... .++.+++++
T Consensus 30 ~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~-~~v~~vD~s~~~~~~a~~~~~~~--------~~~~~~~~d 100 (234)
T 3dtn_A 30 DFYGVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPE-ATFTLVDMSEKMLEIAKNRFRGN--------LKVKYIEAD 100 (234)
T ss_dssp HHHHHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTT-CEEEEEESCHHHHHHHHHHTCSC--------TTEEEEESC
T ss_pred HHHHHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCC-CeEEEEECCHHHHHHHHHhhccC--------CCEEEEeCc
Confidence 345677777753457789999999999999999999875 47999999999999999877543 167888888
Q ss_pred cchHHHHHhhhcccccccCccEEEEcc
Q 012954 199 FRHIKSVLGQIDENILRSGVDAILMDL 225 (452)
Q Consensus 199 F~~i~~~L~~~~~~l~~~~VDGILfDL 225 (452)
+..+. ....+|.|+...
T Consensus 101 ~~~~~----------~~~~fD~v~~~~ 117 (234)
T 3dtn_A 101 YSKYD----------FEEKYDMVVSAL 117 (234)
T ss_dssp TTTCC----------CCSCEEEEEEES
T ss_pred hhccC----------CCCCceEEEEeC
Confidence 76542 013689888753
No 18
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=97.98 E-value=1.9e-05 Score=76.05 Aligned_cols=77 Identities=17% Similarity=0.125 Sum_probs=61.0
Q ss_pred CCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhcc
Q 012954 132 RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDE 211 (452)
Q Consensus 132 ~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~ 211 (452)
+++..++|+.+|.|+.+..+++.... +|+|+|+++.|++.|+++++..+. ..++++++++..++..
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~~~~~--~V~~vD~s~~~~~~a~~n~~~n~~-----~~~v~~~~~D~~~~~~------- 189 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAVYGKA--KVIAIEKDPYTFKFLVENIHLNKV-----EDRMSAYNMDNRDFPG------- 189 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCC--EEEEECCCHHHHHHHHHHHHHTTC-----TTTEEEECSCTTTCCC-------
T ss_pred CCCCEEEEecccCCHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHHcCC-----CceEEEEECCHHHhcc-------
Confidence 47899999999999999999987554 699999999999999998876543 2358888888765421
Q ss_pred cccccCccEEEEcc
Q 012954 212 NILRSGVDAILMDL 225 (452)
Q Consensus 212 ~l~~~~VDGILfDL 225 (452)
...+|.|++|.
T Consensus 190 ---~~~fD~Vi~~~ 200 (278)
T 2frn_A 190 ---ENIADRILMGY 200 (278)
T ss_dssp ---CSCEEEEEECC
T ss_pred ---cCCccEEEECC
Confidence 13699998853
No 19
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=97.97 E-value=2.6e-05 Score=71.16 Aligned_cols=96 Identities=8% Similarity=0.024 Sum_probs=70.5
Q ss_pred HHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcch
Q 012954 122 GEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRH 201 (452)
Q Consensus 122 ~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~ 201 (452)
.+++..|....++..++|.-.|.|+++..+++.+++.++|+|+|+++.+++.|+++++..+. ..++++++++...
T Consensus 47 ~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~ 121 (223)
T 3duw_A 47 GKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANL-----NDRVEVRTGLALD 121 (223)
T ss_dssp HHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEESCHHH
T ss_pred HHHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEEcCHHH
Confidence 33444442223678999999999999999999988667899999999999999999887654 2368899988765
Q ss_pred HHHHHhhhcccccccCccEEEEccC
Q 012954 202 IKSVLGQIDENILRSGVDAILMDLG 226 (452)
Q Consensus 202 i~~~L~~~~~~l~~~~VDGILfDLG 226 (452)
....+...+ ...+|.|++|..
T Consensus 122 ~~~~~~~~~----~~~fD~v~~d~~ 142 (223)
T 3duw_A 122 SLQQIENEK----YEPFDFIFIDAD 142 (223)
T ss_dssp HHHHHHHTT----CCCCSEEEECSC
T ss_pred HHHHHHhcC----CCCcCEEEEcCC
Confidence 433222111 136999998743
No 20
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=97.94 E-value=5.5e-05 Score=66.32 Aligned_cols=96 Identities=10% Similarity=0.052 Sum_probs=71.2
Q ss_pred ccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEcc
Q 012954 118 PVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAK 197 (452)
Q Consensus 118 PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~ 197 (452)
+.+++.+++.+....++..++|...|.|+.+..+++. +. .+|+|+|.++.+++.|+++++..+. ..+++++++
T Consensus 29 ~~~~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~-~~-~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~~~~~~~ 101 (187)
T 2fhp_A 29 DKVKESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSR-GM-DKSICIEKNFAALKVIKENIAITKE-----PEKFEVRKM 101 (187)
T ss_dssp HHHHHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHT-TC-SEEEEEESCHHHHHHHHHHHHHHTC-----GGGEEEEES
T ss_pred HHHHHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHc-CC-CEEEEEECCHHHHHHHHHHHHHhCC-----CcceEEEEC
Confidence 3467777777753347789999999999999988873 33 5799999999999999998876542 237889999
Q ss_pred CcchHHHHHhhhcccccccCccEEEEcc
Q 012954 198 NFRHIKSVLGQIDENILRSGVDAILMDL 225 (452)
Q Consensus 198 nF~~i~~~L~~~~~~l~~~~VDGILfDL 225 (452)
++.+....+... ...+|.|++|.
T Consensus 102 d~~~~~~~~~~~-----~~~fD~i~~~~ 124 (187)
T 2fhp_A 102 DANRALEQFYEE-----KLQFDLVLLDP 124 (187)
T ss_dssp CHHHHHHHHHHT-----TCCEEEEEECC
T ss_pred cHHHHHHHHHhc-----CCCCCEEEECC
Confidence 887643322211 23699999874
No 21
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=97.93 E-value=2.7e-05 Score=70.99 Aligned_cols=96 Identities=17% Similarity=0.022 Sum_probs=69.2
Q ss_pred HHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcch
Q 012954 122 GEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRH 201 (452)
Q Consensus 122 ~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~ 201 (452)
.+++..+....++..++|...|.|+.+..+++.+++.++|+|+|+++.+++.|+++++..+. ..++++++++..+
T Consensus 53 ~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~ 127 (225)
T 3tr6_A 53 AQLLALLVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGL-----SDKIGLRLSPAKD 127 (225)
T ss_dssp HHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEESCHHH
T ss_pred HHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCC-----CCceEEEeCCHHH
Confidence 34444443223678999999999999999999888667899999999999999999887654 2368888888754
Q ss_pred HHHHHhhhcccccccCccEEEEcc
Q 012954 202 IKSVLGQIDENILRSGVDAILMDL 225 (452)
Q Consensus 202 i~~~L~~~~~~l~~~~VDGILfDL 225 (452)
....+...+ ....+|.|++|.
T Consensus 128 ~~~~~~~~~---~~~~fD~v~~~~ 148 (225)
T 3tr6_A 128 TLAELIHAG---QAWQYDLIYIDA 148 (225)
T ss_dssp HHHHHHTTT---CTTCEEEEEECS
T ss_pred HHHHhhhcc---CCCCccEEEECC
Confidence 322222110 013699999765
No 22
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=97.92 E-value=7.3e-05 Score=67.26 Aligned_cols=75 Identities=11% Similarity=0.040 Sum_probs=57.7
Q ss_pred CCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhcc
Q 012954 132 RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDE 211 (452)
Q Consensus 132 ~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~ 211 (452)
.++..++|.-.|.|..+..+.+ .+. ..|+|+|+++.+++.|++++...+. .++.+++.++... .
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~-~~~-~~v~~vD~s~~~~~~a~~~~~~~~~------~~v~~~~~d~~~~---~----- 122 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHK-LGA-KSVLATDISDESMTAAEENAALNGI------YDIALQKTSLLAD---V----- 122 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHH-TTC-SEEEEEESCHHHHHHHHHHHHHTTC------CCCEEEESSTTTT---C-----
T ss_pred cCCCEEEEECCCCCHHHHHHHH-CCC-CEEEEEECCHHHHHHHHHHHHHcCC------CceEEEecccccc---C-----
Confidence 3678999999999988888654 554 4799999999999999998876543 1377788877542 1
Q ss_pred cccccCccEEEEcc
Q 012954 212 NILRSGVDAILMDL 225 (452)
Q Consensus 212 ~l~~~~VDGILfDL 225 (452)
...+|.|+.+.
T Consensus 123 ---~~~fD~i~~~~ 133 (205)
T 3grz_A 123 ---DGKFDLIVANI 133 (205)
T ss_dssp ---CSCEEEEEEES
T ss_pred ---CCCceEEEECC
Confidence 24699999874
No 23
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=97.92 E-value=2.5e-05 Score=73.60 Aligned_cols=93 Identities=13% Similarity=0.086 Sum_probs=69.6
Q ss_pred HHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcch
Q 012954 122 GEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRH 201 (452)
Q Consensus 122 ~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~ 201 (452)
.+++..|....++..++|...|.|+.+..+++.+++.++|+|+|+++.+++.|+++++..+. ..+++++.++..+
T Consensus 52 ~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~-----~~~v~~~~~d~~~ 126 (248)
T 3tfw_A 52 GQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGV-----DQRVTLREGPALQ 126 (248)
T ss_dssp HHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTC-----TTTEEEEESCHHH
T ss_pred HHHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEEcCHHH
Confidence 44455442223678999999999999999999988667899999999999999999887653 2378888888765
Q ss_pred HHHHHhhhcccccccCccEEEEcc
Q 012954 202 IKSVLGQIDENILRSGVDAILMDL 225 (452)
Q Consensus 202 i~~~L~~~~~~l~~~~VDGILfDL 225 (452)
. +.... ....+|.|++|.
T Consensus 127 ~---l~~~~---~~~~fD~V~~d~ 144 (248)
T 3tfw_A 127 S---LESLG---ECPAFDLIFIDA 144 (248)
T ss_dssp H---HHTCC---SCCCCSEEEECS
T ss_pred H---HHhcC---CCCCeEEEEECC
Confidence 3 22221 013699999874
No 24
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=97.92 E-value=2.4e-05 Score=70.28 Aligned_cols=89 Identities=12% Similarity=0.129 Sum_probs=67.6
Q ss_pred ccchHHHHhhccCCC--CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEE
Q 012954 118 PVMLGEVLDVFSSSR--TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTF 195 (452)
Q Consensus 118 PVLl~Evl~~L~~~~--~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li 195 (452)
..++..+++.+.... ++..++|.-.|.|..+..+++..|. ..++|+|.++.+++.|+++++..+. .+++++
T Consensus 48 ~~~~~~~~~~l~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~------~~v~~~ 120 (207)
T 1jsx_A 48 EMLVRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVRPE-AHFTLLDSLGKRVRFLRQVQHELKL------ENIEPV 120 (207)
T ss_dssp CHHHHHHHHHHHHGGGCCSSEEEEETCTTTTTHHHHHHHCTT-SEEEEEESCHHHHHHHHHHHHHTTC------SSEEEE
T ss_pred HHHHHHHHhhhhhhhhcCCCeEEEECCCCCHHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHHHHHcCC------CCeEEE
Confidence 346777777775211 4789999999999999999988876 4799999999999999998876543 248888
Q ss_pred ccCcchHHHHHhhhcccccccCccEEEE
Q 012954 196 AKNFRHIKSVLGQIDENILRSGVDAILM 223 (452)
Q Consensus 196 ~~nF~~i~~~L~~~~~~l~~~~VDGILf 223 (452)
+.++..+. . ...+|.|+.
T Consensus 121 ~~d~~~~~---~-------~~~~D~i~~ 138 (207)
T 1jsx_A 121 QSRVEEFP---S-------EPPFDGVIS 138 (207)
T ss_dssp ECCTTTSC---C-------CSCEEEEEC
T ss_pred ecchhhCC---c-------cCCcCEEEE
Confidence 88876531 1 136888876
No 25
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=97.92 E-value=6.4e-05 Score=65.91 Aligned_cols=92 Identities=10% Similarity=0.103 Sum_probs=69.5
Q ss_pred cchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccC
Q 012954 119 VMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKN 198 (452)
Q Consensus 119 VLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~n 198 (452)
.+...+++.+....++..++|.-.|.|..+..+++. +. ..|+|+|.++.+++.|+++++..+. ..++++++++
T Consensus 17 ~~~~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~-~~-~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~~~~~~~d 89 (177)
T 2esr_A 17 KVRGAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSR-GM-SAAVLVEKNRKAQAIIQDNIIMTKA-----ENRFTLLKME 89 (177)
T ss_dssp -CHHHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHT-TC-CEEEEECCCHHHHHHHHHHHHTTTC-----GGGEEEECSC
T ss_pred HHHHHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHc-CC-CEEEEEECCHHHHHHHHHHHHHcCC-----CCceEEEECc
Confidence 367777888853347789999999999999998876 43 5799999999999999998876542 2368899988
Q ss_pred cchHHHHHhhhcccccccCccEEEEcc
Q 012954 199 FRHIKSVLGQIDENILRSGVDAILMDL 225 (452)
Q Consensus 199 F~~i~~~L~~~~~~l~~~~VDGILfDL 225 (452)
+.+. +... ...+|.|++|.
T Consensus 90 ~~~~---~~~~-----~~~fD~i~~~~ 108 (177)
T 2esr_A 90 AERA---IDCL-----TGRFDLVFLDP 108 (177)
T ss_dssp HHHH---HHHB-----CSCEEEEEECC
T ss_pred HHHh---HHhh-----cCCCCEEEECC
Confidence 7653 2221 13599999873
No 26
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=97.92 E-value=3.5e-05 Score=80.77 Aligned_cols=88 Identities=11% Similarity=0.114 Sum_probs=72.7
Q ss_pred hhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHH
Q 012954 126 DVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSV 205 (452)
Q Consensus 126 ~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~ 205 (452)
..|. +.++..++|+..|.||.|..|++.+++.+.|+|+|+++.+++.++++++.++. . +.+++.+...+...
T Consensus 95 ~~L~-~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~------~-v~~~~~Da~~l~~~ 166 (464)
T 3m6w_A 95 VLLD-PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGA------P-LAVTQAPPRALAEA 166 (464)
T ss_dssp HHHC-CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCC------C-CEEECSCHHHHHHH
T ss_pred HhcC-cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC------e-EEEEECCHHHhhhh
Confidence 3454 46889999999999999999999988878999999999999999999988753 2 77888887776543
Q ss_pred HhhhcccccccCccEEEEccCCCc
Q 012954 206 LGQIDENILRSGVDAILMDLGMSS 229 (452)
Q Consensus 206 L~~~~~~l~~~~VDGILfDLGvSS 229 (452)
.. ..+|.||+|-=+|.
T Consensus 167 ~~--------~~FD~Il~D~PcSg 182 (464)
T 3m6w_A 167 FG--------TYFHRVLLDAPCSG 182 (464)
T ss_dssp HC--------SCEEEEEEECCCCC
T ss_pred cc--------ccCCEEEECCCcCC
Confidence 32 36999999988874
No 27
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=97.88 E-value=5.3e-05 Score=79.48 Aligned_cols=84 Identities=13% Similarity=0.054 Sum_probs=70.9
Q ss_pred CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhccc
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDEN 212 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~ 212 (452)
++..++|++.|.||-|..|++.+++.+.|+|+|+++.+++.++++++.++. .++.+++.+...+.....
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~------~nv~~~~~D~~~~~~~~~----- 185 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGI------SNVALTHFDGRVFGAAVP----- 185 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTC------CSEEEECCCSTTHHHHST-----
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC------CcEEEEeCCHHHhhhhcc-----
Confidence 889999999999999999999987778999999999999999999988754 268889998887653321
Q ss_pred ccccCccEEEEccCCCcc
Q 012954 213 ILRSGVDAILMDLGMSSM 230 (452)
Q Consensus 213 l~~~~VDGILfDLGvSS~ 230 (452)
..+|.||+|-=+|..
T Consensus 186 ---~~fD~Il~D~PcSg~ 200 (479)
T 2frx_A 186 ---EMFDAILLDAPCSGE 200 (479)
T ss_dssp ---TCEEEEEEECCCCCG
T ss_pred ---ccCCEEEECCCcCCc
Confidence 369999999877753
No 28
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=97.84 E-value=0.00014 Score=61.90 Aligned_cols=88 Identities=17% Similarity=0.138 Sum_probs=61.2
Q ss_pred hHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcc
Q 012954 121 LGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFR 200 (452)
Q Consensus 121 l~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~ 200 (452)
+.++++.+....++..++|...|.|+.+..+++.+++...++|+|.++ +++. .++.+++.++.
T Consensus 10 l~~~~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----------------~~~~~~~~d~~ 72 (180)
T 1ej0_A 10 LDEIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI----------------VGVDFLQGDFR 72 (180)
T ss_dssp HHHHHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC----------------TTEEEEESCTT
T ss_pred HHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc----------------CcEEEEEcccc
Confidence 556677665345788999999999999999998865446799999998 5421 15677888887
Q ss_pred hHHHH--HhhhcccccccCccEEEEccCCC
Q 012954 201 HIKSV--LGQIDENILRSGVDAILMDLGMS 228 (452)
Q Consensus 201 ~i~~~--L~~~~~~l~~~~VDGILfDLGvS 228 (452)
+.... +... +....+|.|+.|.-+.
T Consensus 73 ~~~~~~~~~~~---~~~~~~D~i~~~~~~~ 99 (180)
T 1ej0_A 73 DELVMKALLER---VGDSKVQVVMSDMAPN 99 (180)
T ss_dssp SHHHHHHHHHH---HTTCCEEEEEECCCCC
T ss_pred cchhhhhhhcc---CCCCceeEEEECCCcc
Confidence 65421 1110 0124699999886654
No 29
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=97.83 E-value=4.8e-05 Score=71.11 Aligned_cols=60 Identities=20% Similarity=0.193 Sum_probs=46.3
Q ss_pred chHHHHhhccCCCCCCEEEEEccCCChhHHHHHHh--CCCCCEEEEEeCCHHHHHHHHHHHhhh
Q 012954 120 MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRA--HPELKLHIGVDVDPSALAKARAHLNSL 181 (452)
Q Consensus 120 Ll~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~--~p~~g~VigfDrD~~Ai~~Ak~rL~~~ 181 (452)
|+..+++.+. ..++..++|..+|.|..+..+++. .+. ..|+|+|+++.+++.|++++...
T Consensus 39 l~~~~l~~~~-~~~~~~vLD~gcGsG~~~~~la~~~~~~~-~~v~gvDis~~~l~~A~~~~~~~ 100 (250)
T 1o9g_A 39 IFQRALARLP-GDGPVTLWDPCCGSGYLLTVLGLLHRRSL-RQVIASDVDPAPLELAAKNLALL 100 (250)
T ss_dssp HHHHHHHTSS-CCSCEEEEETTCTTSHHHHHHHHHTGGGE-EEEEEEESCHHHHHHHHHHHHTT
T ss_pred HHHHHHHhcc-cCCCCeEEECCCCCCHHHHHHHHHhccCC-CeEEEEECCHHHHHHHHHHHHHh
Confidence 3445555553 235678999999999999999887 443 47999999999999999877543
No 30
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=97.82 E-value=2.4e-05 Score=75.50 Aligned_cols=93 Identities=11% Similarity=0.080 Sum_probs=66.6
Q ss_pred ccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCH-------HHHHHHHHHHhhhccCCCCCCc
Q 012954 118 PVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDP-------SALAKARAHLNSLLHGQAHPHL 190 (452)
Q Consensus 118 PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~-------~Ai~~Ak~rL~~~~~~~~~~~~ 190 (452)
..|+.+++ . ..++..++|+|+|.|..+..+.+. + ++|+|+|+++ ++++.|+++++..+. ..
T Consensus 72 ~~~l~~a~---~-~~~~~~VLDlgcG~G~~a~~lA~~-g--~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~-----~~ 139 (258)
T 2r6z_A 72 GELIAKAV---N-HTAHPTVWDATAGLGRDSFVLASL-G--LTVTAFEQHPAVACLLSDGIRRALLNPETQDT-----AA 139 (258)
T ss_dssp -CHHHHHT---T-GGGCCCEEETTCTTCHHHHHHHHT-T--CCEEEEECCHHHHHHHHHHHHHHHHSHHHHHH-----HT
T ss_pred hHHHHHHh---C-cCCcCeEEEeeCccCHHHHHHHHh-C--CEEEEEECChhhhHHHHHHHHHHHhHHHhhCC-----cc
Confidence 55666665 2 236789999999999888887774 2 4699999999 999999887655432 12
Q ss_pred eEEEEccCcchHHHHHhhhcccccccCccEEEEccCC
Q 012954 191 KTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGM 227 (452)
Q Consensus 191 r~~li~~nF~~i~~~L~~~~~~l~~~~VDGILfDLGv 227 (452)
+++++++++.++...+...+ ..+|.|++|-.+
T Consensus 140 ri~~~~~d~~~~l~~~~~~~-----~~fD~V~~dP~~ 171 (258)
T 2r6z_A 140 RINLHFGNAAEQMPALVKTQ-----GKPDIVYLDPMY 171 (258)
T ss_dssp TEEEEESCHHHHHHHHHHHH-----CCCSEEEECCCC
T ss_pred CeEEEECCHHHHHHhhhccC-----CCccEEEECCCC
Confidence 58999999876533232110 369999998766
No 31
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=97.82 E-value=9.5e-05 Score=68.40 Aligned_cols=98 Identities=15% Similarity=0.208 Sum_probs=75.6
Q ss_pred CCCCccccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhh-ccCCCCCCc
Q 012954 112 QQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSL-LHGQAHPHL 190 (452)
Q Consensus 112 ~~~~H~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~-~~~~~~~~~ 190 (452)
.....+|-.+..+++.+. ..++..++|+..|.|..+..+++.+++.++|+|+|.++.+++.|+++++.+ +. .
T Consensus 76 ~~~~~~~~~~~~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~------~ 148 (258)
T 2pwy_A 76 SATPTYPKDASAMVTLLD-LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQV------E 148 (258)
T ss_dssp SSCCCCHHHHHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCC------C
T ss_pred ccccccchHHHHHHHHcC-CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCC------C
Confidence 344456666678888886 568899999999999999999988554568999999999999999988765 42 2
Q ss_pred eEEEEccCcchHHHHHhhhcccccccCccEEEEcc
Q 012954 191 KTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDL 225 (452)
Q Consensus 191 r~~li~~nF~~i~~~L~~~~~~l~~~~VDGILfDL 225 (452)
++.+++.++.+.. + ....+|.|++|+
T Consensus 149 ~v~~~~~d~~~~~--~-------~~~~~D~v~~~~ 174 (258)
T 2pwy_A 149 NVRFHLGKLEEAE--L-------EEAAYDGVALDL 174 (258)
T ss_dssp CEEEEESCGGGCC--C-------CTTCEEEEEEES
T ss_pred CEEEEECchhhcC--C-------CCCCcCEEEECC
Confidence 6888888876531 1 123699999864
No 32
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=97.81 E-value=4.8e-05 Score=74.58 Aligned_cols=108 Identities=12% Similarity=0.123 Sum_probs=77.0
Q ss_pred hcCCCCccccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhc----cCC
Q 012954 110 QQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLL----HGQ 185 (452)
Q Consensus 110 ~~~~~~H~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~----~~~ 185 (452)
.+.....+|-+...+++.+. ..++..++|+-.|.|.++..+++.+++.++|+|+|+++.+++.|+++++.++ .+.
T Consensus 83 ~~~~~~~~~~~~~~~l~~l~-~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~ 161 (336)
T 2b25_A 83 KRGTAITFPKDINMILSMMD-INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSH 161 (336)
T ss_dssp CCSSCCCCHHHHHHHHHHHT-CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTC
T ss_pred cCCCcccCHHHHHHHHHhcC-CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhccccccc
Confidence 33444467778888899886 5688999999999999999999886555689999999999999999887653 000
Q ss_pred -CCCCceEEEEccCcchHHHHHhhhcccccccCccEEEEcc
Q 012954 186 -AHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDL 225 (452)
Q Consensus 186 -~~~~~r~~li~~nF~~i~~~L~~~~~~l~~~~VDGILfDL 225 (452)
+....++++++++..+...-+. ...+|.|++|.
T Consensus 162 ~~~~~~~v~~~~~d~~~~~~~~~-------~~~fD~V~~~~ 195 (336)
T 2b25_A 162 VEEWPDNVDFIHKDISGATEDIK-------SLTFDAVALDM 195 (336)
T ss_dssp SSCCCCCEEEEESCTTCCC--------------EEEEEECS
T ss_pred ccccCCceEEEECChHHcccccC-------CCCeeEEEECC
Confidence 0001368888888765321111 23599999875
No 33
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=97.80 E-value=5.3e-05 Score=77.51 Aligned_cols=91 Identities=21% Similarity=0.273 Sum_probs=73.2
Q ss_pred HhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHH
Q 012954 125 LDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKS 204 (452)
Q Consensus 125 l~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~ 204 (452)
...|. +.++..++|+..|.||.|..+++..++ +.|+|+|+++.+++.++++++.++. ++.+++.++..+..
T Consensus 239 ~~~l~-~~~g~~VLDlgaG~G~~t~~la~~~~~-~~v~a~D~~~~~l~~~~~~~~~~g~-------~~~~~~~D~~~~~~ 309 (429)
T 1sqg_A 239 MTWLA-PQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGM-------KATVKQGDGRYPSQ 309 (429)
T ss_dssp HHHHC-CCTTCEEEEESCTTCHHHHHHHHHCTT-CEEEEEESSTTTHHHHHHHHHHTTC-------CCEEEECCTTCTHH
T ss_pred HHHcC-CCCcCeEEEECCCchHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHHHHHcCC-------CeEEEeCchhhchh
Confidence 44454 468899999999999999999999876 6899999999999999999887643 46778888877654
Q ss_pred HHhhhcccccccCccEEEEccCCCccC
Q 012954 205 VLGQIDENILRSGVDAILMDLGMSSMQ 231 (452)
Q Consensus 205 ~L~~~~~~l~~~~VDGILfDLGvSS~Q 231 (452)
.+. ...+|.||+|--+|..-
T Consensus 310 ~~~-------~~~fD~Vl~D~Pcsg~g 329 (429)
T 1sqg_A 310 WCG-------EQQFDRILLDAPCSATG 329 (429)
T ss_dssp HHT-------TCCEEEEEEECCCCCGG
T ss_pred hcc-------cCCCCEEEEeCCCCccc
Confidence 332 13699999999888653
No 34
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.78 E-value=2.3e-05 Score=76.17 Aligned_cols=97 Identities=11% Similarity=0.019 Sum_probs=65.9
Q ss_pred hHHHHhhccCCCCC--CEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCC---CceEEEE
Q 012954 121 LGEVLDVFSSSRTI--TSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHP---HLKTHTF 195 (452)
Q Consensus 121 l~Evl~~L~~~~~g--giyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~---~~r~~li 195 (452)
-+.+++.+. ..++ ..++|+|.|.|..+..+++. + ++|+++|+++.+.+.+++.++....+.+.. ..+++++
T Consensus 75 ~e~l~~al~-l~~g~~~~VLDl~~G~G~dal~lA~~-g--~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~ 150 (258)
T 2oyr_A 75 GEAVAKAVG-IKGDYLPDVVDATAGLGRDAFVLASV-G--CRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLI 150 (258)
T ss_dssp GSHHHHHTT-CBTTBCCCEEETTCTTCHHHHHHHHH-T--CCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEE
T ss_pred HHHHHHHhc-ccCCCCCEEEEcCCcCCHHHHHHHHc-C--CEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEE
Confidence 444555664 3456 89999999999999999887 2 359999999987666666554332111111 1378999
Q ss_pred ccCcchHHHHHhhhcccccccCccEEEEccCCCc
Q 012954 196 AKNFRHIKSVLGQIDENILRSGVDAILMDLGMSS 229 (452)
Q Consensus 196 ~~nF~~i~~~L~~~~~~l~~~~VDGILfDLGvSS 229 (452)
+++..++ +.... ..+|.|++|-+|..
T Consensus 151 ~~D~~~~---L~~~~-----~~fDvV~lDP~y~~ 176 (258)
T 2oyr_A 151 HASSLTA---LTDIT-----PRPQVVYLDPMFPH 176 (258)
T ss_dssp ESCHHHH---STTCS-----SCCSEEEECCCCCC
T ss_pred ECCHHHH---HHhCc-----ccCCEEEEcCCCCC
Confidence 9987653 44321 25999999999843
No 35
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=97.76 E-value=4.6e-05 Score=78.62 Aligned_cols=92 Identities=15% Similarity=0.175 Sum_probs=72.3
Q ss_pred HhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHH
Q 012954 125 LDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKS 204 (452)
Q Consensus 125 l~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~ 204 (452)
...|. +.++..++|+..|.||.|..+++.+++.+.|+|+|+++.+++.++++++.++. .++++++.++..+..
T Consensus 252 ~~~l~-~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~------~~v~~~~~D~~~~~~ 324 (450)
T 2yxl_A 252 SIVLD-PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGI------KIVKPLVKDARKAPE 324 (450)
T ss_dssp HHHHC-CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTC------CSEEEECSCTTCCSS
T ss_pred HHhcC-CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCC------CcEEEEEcChhhcch
Confidence 34454 46889999999999999999999988767899999999999999999887653 268888888765421
Q ss_pred HHhhhcccccccCccEEEEccCCCcc
Q 012954 205 VLGQIDENILRSGVDAILMDLGMSSM 230 (452)
Q Consensus 205 ~L~~~~~~l~~~~VDGILfDLGvSS~ 230 (452)
. . ....+|.||+|-=+|..
T Consensus 325 ~---~----~~~~fD~Vl~D~Pcsg~ 343 (450)
T 2yxl_A 325 I---I----GEEVADKVLLDAPCTSS 343 (450)
T ss_dssp S---S----CSSCEEEEEEECCCCCG
T ss_pred h---h----ccCCCCEEEEcCCCCCC
Confidence 1 1 11369999999887754
No 36
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=97.75 E-value=8.2e-05 Score=69.15 Aligned_cols=96 Identities=11% Similarity=0.129 Sum_probs=70.7
Q ss_pred ccccchHHHHhhcc---CCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceE
Q 012954 116 HIPVMLGEVLDVFS---SSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKT 192 (452)
Q Consensus 116 H~PVLl~Evl~~L~---~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~ 192 (452)
++|++-.++...|. ...++..++|...|.|..+..+++..+. ++|+|+|+++.+++.|+++++..+. ..++
T Consensus 51 ~~~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~v 124 (232)
T 3ntv_A 51 EVPIVDRLTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFASISDD-IHVTTIERNETMIQYAKQNLATYHF-----ENQV 124 (232)
T ss_dssp TCCCCCHHHHHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTTCTT-CEEEEEECCHHHHHHHHHHHHHTTC-----TTTE
T ss_pred CCCCcCHHHHHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHhCCC-CEEEEEECCHHHHHHHHHHHHHcCC-----CCcE
Confidence 55665554444332 1236789999999999999999986664 6899999999999999999887653 2378
Q ss_pred EEEccCcchHHH-HHhhhcccccccCccEEEEcc
Q 012954 193 HTFAKNFRHIKS-VLGQIDENILRSGVDAILMDL 225 (452)
Q Consensus 193 ~li~~nF~~i~~-~L~~~~~~l~~~~VDGILfDL 225 (452)
+++++++.+... .+. ..+|.|++|.
T Consensus 125 ~~~~~d~~~~~~~~~~--------~~fD~V~~~~ 150 (232)
T 3ntv_A 125 RIIEGNALEQFENVND--------KVYDMIFIDA 150 (232)
T ss_dssp EEEESCGGGCHHHHTT--------SCEEEEEEET
T ss_pred EEEECCHHHHHHhhcc--------CCccEEEEcC
Confidence 999998865422 221 3699999873
No 37
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=97.74 E-value=0.0001 Score=69.46 Aligned_cols=99 Identities=11% Similarity=0.087 Sum_probs=76.2
Q ss_pred CCCCccccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhh-c-cCCCCCC
Q 012954 112 QQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSL-L-HGQAHPH 189 (452)
Q Consensus 112 ~~~~H~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~-~-~~~~~~~ 189 (452)
.....+|-++..+++.+. ..++..++|.-.|.|..+..+++.+++.++|+|+|+++++++.|+++++.+ + . .
T Consensus 79 ~~~~~~~~~~~~i~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~-----~ 152 (280)
T 1i9g_A 79 GPQVIYPKDAAQIVHEGD-IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQP-----P 152 (280)
T ss_dssp CSCCCCHHHHHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSC-----C
T ss_pred cceeecHHHHHHHHHHcC-CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCC-----C
Confidence 334456777888888886 568899999999999999999987655568999999999999999988765 3 1 1
Q ss_pred ceEEEEccCcchHHHHHhhhcccccccCccEEEEcc
Q 012954 190 LKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDL 225 (452)
Q Consensus 190 ~r~~li~~nF~~i~~~L~~~~~~l~~~~VDGILfDL 225 (452)
.++.+++.++.+.. + ....+|.|++|+
T Consensus 153 ~~v~~~~~d~~~~~--~-------~~~~~D~v~~~~ 179 (280)
T 1i9g_A 153 DNWRLVVSDLADSE--L-------PDGSVDRAVLDM 179 (280)
T ss_dssp TTEEEECSCGGGCC--C-------CTTCEEEEEEES
T ss_pred CcEEEEECchHhcC--C-------CCCceeEEEECC
Confidence 26888888876531 1 123699999864
No 38
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=97.73 E-value=5.9e-05 Score=69.24 Aligned_cols=85 Identities=11% Similarity=0.090 Sum_probs=65.2
Q ss_pred CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhccc
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDEN 212 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~ 212 (452)
++..++|.-.|.|+.+..+++.+++.++|+|+|+++.+++.|+++++..+. ..++++++++..+. +......
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~---l~~~~~~ 129 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGL-----QDKVTILNGASQDL---IPQLKKK 129 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC-----GGGEEEEESCHHHH---GGGTTTT
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCC-----CCceEEEECCHHHH---HHHHHHh
Confidence 568999999999999999998887667899999999999999999887653 24799999887553 3322100
Q ss_pred ccccCccEEEEcc
Q 012954 213 ILRSGVDAILMDL 225 (452)
Q Consensus 213 l~~~~VDGILfDL 225 (452)
.....+|.|++|.
T Consensus 130 ~~~~~fD~V~~d~ 142 (221)
T 3u81_A 130 YDVDTLDMVFLDH 142 (221)
T ss_dssp SCCCCCSEEEECS
T ss_pred cCCCceEEEEEcC
Confidence 0014699999884
No 39
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=97.71 E-value=0.00034 Score=64.02 Aligned_cols=87 Identities=10% Similarity=0.052 Sum_probs=66.4
Q ss_pred hHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcc
Q 012954 121 LGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFR 200 (452)
Q Consensus 121 l~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~ 200 (452)
...+++.+. ..++..++|.-.|.|..+..+++. ..+|+|+|+++++++.|+++++.++. ..++.++++++.
T Consensus 44 ~~~~l~~l~-~~~~~~vLDlGcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~g~-----~~~v~~~~~d~~ 114 (204)
T 3njr_A 44 RALTLAALA-PRRGELLWDIGGGSGSVSVEWCLA---GGRAITIEPRADRIENIQKNIDTYGL-----SPRMRAVQGTAP 114 (204)
T ss_dssp HHHHHHHHC-CCTTCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEESCTT
T ss_pred HHHHHHhcC-CCCCCEEEEecCCCCHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCC-----CCCEEEEeCchh
Confidence 345566775 468899999999999999888876 35799999999999999998877653 126888898876
Q ss_pred hHHHHHhhhcccccccCccEEEEcc
Q 012954 201 HIKSVLGQIDENILRSGVDAILMDL 225 (452)
Q Consensus 201 ~i~~~L~~~~~~l~~~~VDGILfDL 225 (452)
+. +... ..+|.|+++-
T Consensus 115 ~~---~~~~------~~~D~v~~~~ 130 (204)
T 3njr_A 115 AA---LADL------PLPEAVFIGG 130 (204)
T ss_dssp GG---GTTS------CCCSEEEECS
T ss_pred hh---cccC------CCCCEEEECC
Confidence 52 2221 3699998654
No 40
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=97.71 E-value=0.00016 Score=64.41 Aligned_cols=91 Identities=13% Similarity=0.074 Sum_probs=66.8
Q ss_pred chHHHHhhccC--CCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEcc
Q 012954 120 MLGEVLDVFSS--SRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAK 197 (452)
Q Consensus 120 Ll~Evl~~L~~--~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~ 197 (452)
+...+++.|.. ..++..++|...|.|..+..+++. + ..+|+|+|+|+.+++.|+++++..+. .+++++++
T Consensus 29 ~~~~l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~------~~v~~~~~ 100 (189)
T 3p9n_A 29 VRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSR-G-AASVLFVESDQRSAAVIARNIEALGL------SGATLRRG 100 (189)
T ss_dssp HHHHHHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHT-T-CSEEEEEECCHHHHHHHHHHHHHHTC------SCEEEEES
T ss_pred HHHHHHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHC-C-CCeEEEEECCHHHHHHHHHHHHHcCC------CceEEEEc
Confidence 34445555531 137889999999999999988874 3 34799999999999999998877643 36889999
Q ss_pred CcchHHHHHhhhcccccccCccEEEEcc
Q 012954 198 NFRHIKSVLGQIDENILRSGVDAILMDL 225 (452)
Q Consensus 198 nF~~i~~~L~~~~~~l~~~~VDGILfDL 225 (452)
+..++...+. ...+|.|++|.
T Consensus 101 d~~~~~~~~~-------~~~fD~i~~~~ 121 (189)
T 3p9n_A 101 AVAAVVAAGT-------TSPVDLVLADP 121 (189)
T ss_dssp CHHHHHHHCC-------SSCCSEEEECC
T ss_pred cHHHHHhhcc-------CCCccEEEECC
Confidence 8876532221 24799999874
No 41
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=97.67 E-value=6.7e-05 Score=66.73 Aligned_cols=97 Identities=20% Similarity=0.092 Sum_probs=56.9
Q ss_pred ccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEcc
Q 012954 118 PVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAK 197 (452)
Q Consensus 118 PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~ 197 (452)
..|++.+++.+....++..++|...|.|..+..+++..+. ..++|+|+++.+++.|++++...+. +++++++
T Consensus 15 ~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~-------~~~~~~~ 86 (215)
T 4dzr_A 15 EVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPG-VSVTAVDLSMDALAVARRNAERFGA-------VVDWAAA 86 (215)
T ss_dssp HHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTT-EEEEEEECC--------------------------CCHH
T ss_pred HHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCC-CeEEEEECCHHHHHHHHHHHHHhCC-------ceEEEEc
Confidence 3478888888863257889999999999999999998765 4799999999999999987765421 4566666
Q ss_pred CcchHHHHHhhhcccccccCccEEEEccCC
Q 012954 198 NFRHIKSVLGQIDENILRSGVDAILMDLGM 227 (452)
Q Consensus 198 nF~~i~~~L~~~~~~l~~~~VDGILfDLGv 227 (452)
++.+ .+.... .....+|.|+.|.-|
T Consensus 87 d~~~---~~~~~~--~~~~~fD~i~~npp~ 111 (215)
T 4dzr_A 87 DGIE---WLIERA--ERGRPWHAIVSNPPY 111 (215)
T ss_dssp HHHH---HHHHHH--HTTCCBSEEEECCCC
T ss_pred chHh---hhhhhh--hccCcccEEEECCCC
Confidence 5544 222100 001479999998765
No 42
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=97.67 E-value=0.00037 Score=64.11 Aligned_cols=80 Identities=11% Similarity=0.205 Sum_probs=64.9
Q ss_pred CCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhcc
Q 012954 132 RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDE 211 (452)
Q Consensus 132 ~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~ 211 (452)
.++..++|.-+|.|.++..+.+..|. ..++|+|+++.+++.|+++++..+. .++.+++++..++..++..
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p~-~~v~giD~s~~~l~~a~~~~~~~~~------~nv~~~~~d~~~l~~~~~~--- 106 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNPD-INYIGIELFKSVIVTAVQKVKDSEA------QNVKLLNIDADTLTDVFEP--- 106 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCTT-SEEEEECSCHHHHHHHHHHHHHSCC------SSEEEECCCGGGHHHHCCT---
T ss_pred CCCceEEEEecCCCHHHHHHHHHCCC-CCEEEEEechHHHHHHHHHHHHcCC------CCEEEEeCCHHHHHhhcCc---
Confidence 36789999999999999999988876 4699999999999999998876543 3689999998887655432
Q ss_pred cccccCccEEEEcc
Q 012954 212 NILRSGVDAILMDL 225 (452)
Q Consensus 212 ~l~~~~VDGILfDL 225 (452)
..+|.|++++
T Consensus 107 ----~~~d~v~~~~ 116 (213)
T 2fca_A 107 ----GEVKRVYLNF 116 (213)
T ss_dssp ----TSCCEEEEES
T ss_pred ----CCcCEEEEEC
Confidence 3689887653
No 43
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=97.65 E-value=0.00015 Score=62.42 Aligned_cols=92 Identities=11% Similarity=0.025 Sum_probs=67.1
Q ss_pred cchHHHHhhccCC-CCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEcc
Q 012954 119 VMLGEVLDVFSSS-RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAK 197 (452)
Q Consensus 119 VLl~Evl~~L~~~-~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~ 197 (452)
.+.+.+++.+... .++..++|...|.|..+..+++..+ .|+|+|.++.+++.|++++...+. +++++++
T Consensus 26 ~~~~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~-------~~~~~~~ 95 (171)
T 1ws6_A 26 RLRKALFDYLRLRYPRRGRFLDPFAGSGAVGLEAASEGW---EAVLVEKDPEAVRLLKENVRRTGL-------GARVVAL 95 (171)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEEETCSSCHHHHHHHHTTC---EEEEECCCHHHHHHHHHHHHHHTC-------CCEEECS
T ss_pred HHHHHHHHHHHhhccCCCeEEEeCCCcCHHHHHHHHCCC---eEEEEeCCHHHHHHHHHHHHHcCC-------ceEEEec
Confidence 3556667666421 1678999999999999999987643 299999999999999998876532 6788899
Q ss_pred CcchHHHHHhhhcccccccCccEEEEcc
Q 012954 198 NFRHIKSVLGQIDENILRSGVDAILMDL 225 (452)
Q Consensus 198 nF~~i~~~L~~~~~~l~~~~VDGILfDL 225 (452)
++.+....+... ...+|.|+.|.
T Consensus 96 d~~~~~~~~~~~-----~~~~D~i~~~~ 118 (171)
T 1ws6_A 96 PVEVFLPEAKAQ-----GERFTVAFMAP 118 (171)
T ss_dssp CHHHHHHHHHHT-----TCCEEEEEECC
T ss_pred cHHHHHHhhhcc-----CCceEEEEECC
Confidence 887643222211 12699999874
No 44
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=97.65 E-value=0.00012 Score=72.25 Aligned_cols=91 Identities=20% Similarity=0.201 Sum_probs=65.1
Q ss_pred chHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCC----CEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEE
Q 012954 120 MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPEL----KLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTF 195 (452)
Q Consensus 120 Ll~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~----g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li 195 (452)
++.++++.+..+.++..++|.++|.|+-+..+++.++.. ..++|+|+|+.+++.|+.++...+. ++.++
T Consensus 117 ~~~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~-------~~~i~ 189 (344)
T 2f8l_A 117 IVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ-------KMTLL 189 (344)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC-------CCEEE
T ss_pred HHHHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC-------CceEE
Confidence 345566655323467799999999999999999887543 5799999999999999988765432 45667
Q ss_pred ccCcchHHHHHhhhcccccccCccEEEEccCC
Q 012954 196 AKNFRHIKSVLGQIDENILRSGVDAILMDLGM 227 (452)
Q Consensus 196 ~~nF~~i~~~L~~~~~~l~~~~VDGILfDLGv 227 (452)
+++.-. .. ....+|.|+.|.=+
T Consensus 190 ~~D~l~------~~----~~~~fD~Ii~NPPf 211 (344)
T 2f8l_A 190 HQDGLA------NL----LVDPVDVVISDLPV 211 (344)
T ss_dssp ESCTTS------CC----CCCCEEEEEEECCC
T ss_pred ECCCCC------cc----ccCCccEEEECCCC
Confidence 766432 10 12368999988544
No 45
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=97.63 E-value=0.00021 Score=67.00 Aligned_cols=85 Identities=11% Similarity=-0.052 Sum_probs=64.7
Q ss_pred CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhccc
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDEN 212 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~ 212 (452)
+...++|.-.|.|+.+..+++.+++.++|+++|+++.+++.|+++++..+. ..++++++++..++...+...+
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~-----~~~i~~~~gda~~~l~~l~~~~-- 142 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGV-----EHKINFIESDAMLALDNLLQGQ-- 142 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTC-----GGGEEEEESCHHHHHHHHHHST--
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEEcCHHHHHHHHHhcc--
Confidence 567999999999999999999988668999999999999999999877543 2478888887655422221110
Q ss_pred ccccCccEEEEc
Q 012954 213 ILRSGVDAILMD 224 (452)
Q Consensus 213 l~~~~VDGILfD 224 (452)
.....+|.|++|
T Consensus 143 ~~~~~fD~I~~d 154 (237)
T 3c3y_A 143 ESEGSYDFGFVD 154 (237)
T ss_dssp TCTTCEEEEEEC
T ss_pred CCCCCcCEEEEC
Confidence 001369999986
No 46
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=97.63 E-value=0.0002 Score=68.54 Aligned_cols=118 Identities=13% Similarity=0.100 Sum_probs=81.7
Q ss_pred cCCccCCchhhhhhcCCCCcccc-chHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHH
Q 012954 97 TRSNKDYDYESIIQQQQSSHIPV-MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175 (452)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~H~PV-Ll~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak 175 (452)
+.|...|+...|.... .++|- +.+.+.+.+. .++..++|.-+|.|..+..+++.++....|+|+|+++.+++.|+
T Consensus 3 ~f~~~~~~~~~y~~~r--p~y~~~~~~~l~~~~~--~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~ 78 (299)
T 3g5t_A 3 TFSASDFNSERYSSSR--PSYPSDFYKMIDEYHD--GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAE 78 (299)
T ss_dssp GGGSTTCCHHHHHHHS--CCCCHHHHHHHHHHCC--SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHH
T ss_pred cccccccChHHHhhcC--CCCCHHHHHHHHHHhc--CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHH
Confidence 5678889988874432 24444 3444444443 47899999999999999999988744568999999999999999
Q ss_pred HHHhhh-ccCCCCCCceEEEEccCcchHHHHHhhhcccccccCccEEEEccC
Q 012954 176 AHLNSL-LHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLG 226 (452)
Q Consensus 176 ~rL~~~-~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~l~~~~VDGILfDLG 226 (452)
++++.. +. ..++++++.++.++. +.. ...+....+|.|+....
T Consensus 79 ~~~~~~~~~-----~~~v~~~~~d~~~~~--~~~-~~~~~~~~fD~V~~~~~ 122 (299)
T 3g5t_A 79 VIKEGSPDT-----YKNVSFKISSSDDFK--FLG-ADSVDKQKIDMITAVEC 122 (299)
T ss_dssp HHHHHCC-C-----CTTEEEEECCTTCCG--GGC-TTTTTSSCEEEEEEESC
T ss_pred HHHHhccCC-----CCceEEEEcCHHhCC--ccc-cccccCCCeeEEeHhhH
Confidence 988764 11 237888999887653 111 00001146999998653
No 47
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=97.63 E-value=0.00039 Score=60.13 Aligned_cols=91 Identities=12% Similarity=0.113 Sum_probs=70.1
Q ss_pred CccccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEE
Q 012954 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHT 194 (452)
Q Consensus 115 ~H~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~l 194 (452)
...+-+...+++.+. ..++..++|.-.|.|..+..+++ + ...++|+|.++.+++.|+++++..+. .++++
T Consensus 18 ~~~~~~~~~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~--~-~~~v~~vD~~~~~~~~a~~~~~~~~~------~~~~~ 87 (183)
T 2yxd_A 18 ITKEEIRAVSIGKLN-LNKDDVVVDVGCGSGGMTVEIAK--R-CKFVYAIDYLDGAIEVTKQNLAKFNI------KNCQI 87 (183)
T ss_dssp CCCHHHHHHHHHHHC-CCTTCEEEEESCCCSHHHHHHHT--T-SSEEEEEECSHHHHHHHHHHHHHTTC------CSEEE
T ss_pred cCHHHHHHHHHHHcC-CCCCCEEEEeCCCCCHHHHHHHh--c-CCeEEEEeCCHHHHHHHHHHHHHcCC------CcEEE
Confidence 344556777788886 45788999999999999999887 3 35799999999999999998877543 26888
Q ss_pred EccCcchHHHHHhhhcccccccCccEEEEcc
Q 012954 195 FAKNFRHIKSVLGQIDENILRSGVDAILMDL 225 (452)
Q Consensus 195 i~~nF~~i~~~L~~~~~~l~~~~VDGILfDL 225 (452)
++.++.+ .+.. ..+|.|+++.
T Consensus 88 ~~~d~~~---~~~~-------~~~D~i~~~~ 108 (183)
T 2yxd_A 88 IKGRAED---VLDK-------LEFNKAFIGG 108 (183)
T ss_dssp EESCHHH---HGGG-------CCCSEEEECS
T ss_pred EECCccc---cccC-------CCCcEEEECC
Confidence 8888764 2221 3699999873
No 48
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=97.63 E-value=0.00043 Score=62.23 Aligned_cols=92 Identities=14% Similarity=0.123 Sum_probs=72.8
Q ss_pred cccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEc
Q 012954 117 IPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196 (452)
Q Consensus 117 ~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~ 196 (452)
.|-++..+++.+. ..++..++|.-.|.|..+..+++. .++|+|+|+++.+++.|+++++.++. .++++++
T Consensus 62 ~~~~~~~~~~~l~-~~~~~~vLdiG~G~G~~~~~la~~---~~~v~~vD~~~~~~~~a~~~~~~~~~------~~v~~~~ 131 (210)
T 3lbf_A 62 QPYMVARMTELLE-LTPQSRVLEIGTGSGYQTAILAHL---VQHVCSVERIKGLQWQARRRLKNLDL------HNVSTRH 131 (210)
T ss_dssp CHHHHHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHHHHHHHTTC------CSEEEEE
T ss_pred CHHHHHHHHHhcC-CCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCC------CceEEEE
Confidence 5667888888886 568899999999999999888887 35799999999999999999887643 2688888
Q ss_pred cCcchHHHHHhhhcccccccCccEEEEccCC
Q 012954 197 KNFRHIKSVLGQIDENILRSGVDAILMDLGM 227 (452)
Q Consensus 197 ~nF~~i~~~L~~~~~~l~~~~VDGILfDLGv 227 (452)
++..+. +.. ...+|.|+.+.++
T Consensus 132 ~d~~~~---~~~------~~~~D~i~~~~~~ 153 (210)
T 3lbf_A 132 GDGWQG---WQA------RAPFDAIIVTAAP 153 (210)
T ss_dssp SCGGGC---CGG------GCCEEEEEESSBC
T ss_pred CCcccC---Ccc------CCCccEEEEccch
Confidence 877542 111 2469999998554
No 49
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=97.62 E-value=0.00027 Score=63.71 Aligned_cols=89 Identities=20% Similarity=0.162 Sum_probs=70.1
Q ss_pred hHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcc
Q 012954 121 LGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFR 200 (452)
Q Consensus 121 l~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~ 200 (452)
..++++.+. ..++..++|.-.|.|..+..+++..++...|+|+|.++.+++.|++++...+. .++.+++.++.
T Consensus 26 ~~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~------~~~~~~~~d~~ 98 (219)
T 3dh0_A 26 PEKVLKEFG-LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGL------KNVEVLKSEEN 98 (219)
T ss_dssp HHHHHHHHT-CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTC------TTEEEEECBTT
T ss_pred HHHHHHHhC-CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC------CcEEEEecccc
Confidence 467888886 46788999999999999999999874446799999999999999998877643 26888888876
Q ss_pred hHHHHHhhhcccccccCccEEEEcc
Q 012954 201 HIKSVLGQIDENILRSGVDAILMDL 225 (452)
Q Consensus 201 ~i~~~L~~~~~~l~~~~VDGILfDL 225 (452)
++. + ....+|.|+...
T Consensus 99 ~~~--~-------~~~~fD~v~~~~ 114 (219)
T 3dh0_A 99 KIP--L-------PDNTVDFIFMAF 114 (219)
T ss_dssp BCS--S-------CSSCEEEEEEES
T ss_pred cCC--C-------CCCCeeEEEeeh
Confidence 542 1 124699999763
No 50
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=97.59 E-value=0.00023 Score=64.79 Aligned_cols=86 Identities=15% Similarity=0.223 Sum_probs=67.0
Q ss_pred HHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchH
Q 012954 123 EVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHI 202 (452)
Q Consensus 123 Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i 202 (452)
+..+.+. .++..++|.-+|.|..+..+++..|. ..++|+|+++.+++.|++++...+. .++.+++++..++
T Consensus 33 ~~~~~f~--~~~~~vLDiGcG~G~~~~~la~~~p~-~~v~gvD~s~~~l~~a~~~~~~~~~------~~v~~~~~d~~~~ 103 (214)
T 1yzh_A 33 KWRDLFG--NDNPIHVEVGSGKGAFVSGMAKQNPD-INYIGIDIQKSVLSYALDKVLEVGV------PNIKLLWVDGSDL 103 (214)
T ss_dssp THHHHHT--SCCCEEEEESCTTSHHHHHHHHHCTT-SEEEEEESCHHHHHHHHHHHHHHCC------SSEEEEECCSSCG
T ss_pred CHHHHcC--CCCCeEEEEccCcCHHHHHHHHHCCC-CCEEEEEcCHHHHHHHHHHHHHcCC------CCEEEEeCCHHHH
Confidence 4444553 36789999999999999999998876 4799999999999999998876543 3788899988764
Q ss_pred HHHHhhhcccccccCccEEEEc
Q 012954 203 KSVLGQIDENILRSGVDAILMD 224 (452)
Q Consensus 203 ~~~L~~~~~~l~~~~VDGILfD 224 (452)
.+.+. ...+|.|+++
T Consensus 104 ~~~~~-------~~~~D~i~~~ 118 (214)
T 1yzh_A 104 TDYFE-------DGEIDRLYLN 118 (214)
T ss_dssp GGTSC-------TTCCSEEEEE
T ss_pred HhhcC-------CCCCCEEEEE
Confidence 33222 2369999987
No 51
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=97.58 E-value=0.0001 Score=66.85 Aligned_cols=78 Identities=19% Similarity=0.043 Sum_probs=62.3
Q ss_pred CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhccc
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDEN 212 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~ 212 (452)
++..++|...|.|..+..+++.+++.++|+++|+++.+++.|+++++..+. ..++++++++..+. +...
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~---~~~~--- 124 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGL-----IDRVELQVGDPLGI---AAGQ--- 124 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSG-----GGGEEEEESCHHHH---HTTC---
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC-----CceEEEEEecHHHH---hccC---
Confidence 567999999999999999998887567899999999999999998876543 23688888876542 3322
Q ss_pred ccccCccEEEEc
Q 012954 213 ILRSGVDAILMD 224 (452)
Q Consensus 213 l~~~~VDGILfD 224 (452)
.. +|.|+.|
T Consensus 125 --~~-fD~v~~~ 133 (210)
T 3c3p_A 125 --RD-IDILFMD 133 (210)
T ss_dssp --CS-EEEEEEE
T ss_pred --CC-CCEEEEc
Confidence 24 9999988
No 52
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=97.58 E-value=0.00015 Score=66.45 Aligned_cols=94 Identities=10% Similarity=0.082 Sum_probs=68.4
Q ss_pred ccchHHHHhhcc--CCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEE
Q 012954 118 PVMLGEVLDVFS--SSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTF 195 (452)
Q Consensus 118 PVLl~Evl~~L~--~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li 195 (452)
+.+...++..+. ...++..++|+..|.|..+..+++.+++.++|+|+|.++.+++.++++.+.. .+++++
T Consensus 56 ~~~~~~i~~~l~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~--------~~v~~~ 127 (227)
T 1g8a_A 56 SKLGAAIMNGLKNFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER--------RNIVPI 127 (227)
T ss_dssp CHHHHHHHTTCCCCCCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC--------TTEEEE
T ss_pred hhHHHHHHhhHHhcCCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc--------CCCEEE
Confidence 666777744332 1357889999999999999999988765568999999999999988876543 268888
Q ss_pred ccCcchHHHHHhhhcccccccCccEEEEcc
Q 012954 196 AKNFRHIKSVLGQIDENILRSGVDAILMDL 225 (452)
Q Consensus 196 ~~nF~~i~~~L~~~~~~l~~~~VDGILfDL 225 (452)
++++.+...+ ... ...+|.|+.|.
T Consensus 128 ~~d~~~~~~~-~~~-----~~~~D~v~~~~ 151 (227)
T 1g8a_A 128 LGDATKPEEY-RAL-----VPKVDVIFEDV 151 (227)
T ss_dssp ECCTTCGGGG-TTT-----CCCEEEEEECC
T ss_pred EccCCCcchh-hcc-----cCCceEEEECC
Confidence 8888753211 111 13689999764
No 53
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=97.57 E-value=0.00018 Score=66.99 Aligned_cols=78 Identities=15% Similarity=0.059 Sum_probs=59.4
Q ss_pred CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhccc
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDEN 212 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~ 212 (452)
++..++|.-.|.|..+..+....+. .+|+|+|.++.+++.|+++.+..+. .++++++++..++... ...
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~------~~v~~~~~d~~~~~~~-~~~--- 138 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPH-LHVTIVDSLNKRITFLEKLSEALQL------ENTTFCHDRAETFGQR-KDV--- 138 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTT-CEEEEEESCHHHHHHHHHHHHHHTC------SSEEEEESCHHHHTTC-TTT---
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCC-CEEEEEeCCHHHHHHHHHHHHHcCC------CCEEEEeccHHHhccc-ccc---
Confidence 5789999999999888888876665 5799999999999999998877643 2588899887654210 000
Q ss_pred ccccCccEEEE
Q 012954 213 ILRSGVDAILM 223 (452)
Q Consensus 213 l~~~~VDGILf 223 (452)
...+|.|+.
T Consensus 139 --~~~fD~V~~ 147 (240)
T 1xdz_A 139 --RESYDIVTA 147 (240)
T ss_dssp --TTCEEEEEE
T ss_pred --cCCccEEEE
Confidence 136999996
No 54
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=97.57 E-value=0.00025 Score=65.78 Aligned_cols=65 Identities=14% Similarity=-0.083 Sum_probs=55.0
Q ss_pred CCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcch
Q 012954 132 RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRH 201 (452)
Q Consensus 132 ~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~ 201 (452)
.++..++|...|.|..+..+++.+++.++|+++|+++.+++.|+++++..+. ..++.+++++...
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~-----~~~v~~~~~d~~~ 123 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGL-----ENKIFLKLGSALE 123 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTC-----GGGEEEEESCHHH
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCCEEEEECCHHH
Confidence 3678999999999999999999888667899999999999999999876543 2368888888765
No 55
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=97.57 E-value=0.0002 Score=67.56 Aligned_cols=85 Identities=8% Similarity=0.070 Sum_probs=65.6
Q ss_pred CC-CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhh
Q 012954 131 SR-TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQI 209 (452)
Q Consensus 131 ~~-~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~ 209 (452)
.. +++.++|...|.|+-+..+++..+. .|+|+|+|+.+++.|+++++..+. ..+++++++++.++...+.
T Consensus 46 ~~~~~~~vLDlG~G~G~~~~~la~~~~~--~v~gvDi~~~~~~~a~~n~~~~~~-----~~~v~~~~~D~~~~~~~~~-- 116 (259)
T 3lpm_A 46 LPIRKGKIIDLCSGNGIIPLLLSTRTKA--KIVGVEIQERLADMAKRSVAYNQL-----EDQIEIIEYDLKKITDLIP-- 116 (259)
T ss_dssp CCSSCCEEEETTCTTTHHHHHHHTTCCC--EEEEECCSHHHHHHHHHHHHHTTC-----TTTEEEECSCGGGGGGTSC--
T ss_pred CCCCCCEEEEcCCchhHHHHHHHHhcCC--cEEEEECCHHHHHHHHHHHHHCCC-----cccEEEEECcHHHhhhhhc--
Confidence 45 6889999999999999988877543 799999999999999998876543 2379999999887532221
Q ss_pred cccccccCccEEEEccCCCc
Q 012954 210 DENILRSGVDAILMDLGMSS 229 (452)
Q Consensus 210 ~~~l~~~~VDGILfDLGvSS 229 (452)
...+|.|+.|.-|..
T Consensus 117 -----~~~fD~Ii~npPy~~ 131 (259)
T 3lpm_A 117 -----KERADIVTCNPPYFA 131 (259)
T ss_dssp -----TTCEEEEEECCCC--
T ss_pred -----cCCccEEEECCCCCC
Confidence 247999999876543
No 56
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=97.56 E-value=3.9e-05 Score=72.51 Aligned_cols=84 Identities=13% Similarity=-0.018 Sum_probs=65.4
Q ss_pred CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhccc
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDEN 212 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~ 212 (452)
++..++|...|.|+.+..+++.+++.++|+|+|+++.+++.|+++++..+. ..++++++++..++...+...+
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~-----~~~i~~~~gda~~~l~~~~~~~-- 132 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQ-----EHKIKLRLGPALDTLHSLLNEG-- 132 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTC-----TTTEEEEESCHHHHHHHHHHHH--
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEEcCHHHHHHHHhhcc--
Confidence 567999999999999999998887668899999999999999999887654 2379999988765433321110
Q ss_pred ccccCccEEEEc
Q 012954 213 ILRSGVDAILMD 224 (452)
Q Consensus 213 l~~~~VDGILfD 224 (452)
....+|.|++|
T Consensus 133 -~~~~fD~V~~d 143 (242)
T 3r3h_A 133 -GEHQFDFIFID 143 (242)
T ss_dssp -CSSCEEEEEEE
T ss_pred -CCCCEeEEEEc
Confidence 01369999987
No 57
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=97.56 E-value=0.00026 Score=66.07 Aligned_cols=81 Identities=9% Similarity=0.044 Sum_probs=63.8
Q ss_pred CCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhcccc
Q 012954 134 ITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENI 213 (452)
Q Consensus 134 ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~l 213 (452)
+..++|.-.|.|.-+..+++.+++.++|+++|+++++++.|+++++..+.. ..++++++++..++ +....
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~----~~~i~~~~gda~~~---l~~~~--- 126 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYS----PSRVRFLLSRPLDV---MSRLA--- 126 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCC----GGGEEEECSCHHHH---GGGSC---
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC----cCcEEEEEcCHHHH---HHHhc---
Confidence 448999999999999999988887789999999999999999998876531 14799998886543 33321
Q ss_pred cccCccEEEEcc
Q 012954 214 LRSGVDAILMDL 225 (452)
Q Consensus 214 ~~~~VDGILfDL 225 (452)
...+|.|++|-
T Consensus 127 -~~~fD~V~~d~ 137 (221)
T 3dr5_A 127 -NDSYQLVFGQV 137 (221)
T ss_dssp -TTCEEEEEECC
T ss_pred -CCCcCeEEEcC
Confidence 24699999874
No 58
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=97.56 E-value=0.00022 Score=65.65 Aligned_cols=90 Identities=18% Similarity=0.169 Sum_probs=67.7
Q ss_pred hHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcc
Q 012954 121 LGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFR 200 (452)
Q Consensus 121 l~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~ 200 (452)
...++..+....++..++|..+|.|+.+..+++.. ..|+|+|+++.+++.|+++++..+. ..+++++++++.
T Consensus 66 ~~~l~~~~~~~~~~~~vLD~gcG~G~~~~~la~~~---~~v~~vD~s~~~~~~a~~~~~~~~~-----~~~~~~~~~d~~ 137 (241)
T 3gdh_A 66 AEHIAGRVSQSFKCDVVVDAFCGVGGNTIQFALTG---MRVIAIDIDPVKIALARNNAEVYGI-----ADKIEFICGDFL 137 (241)
T ss_dssp HHHHHHHHHHHSCCSEEEETTCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTC-----GGGEEEEESCHH
T ss_pred HHHHHHHhhhccCCCEEEECccccCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcCC-----CcCeEEEECChH
Confidence 34444444322368899999999999999999762 5799999999999999998877642 137889999887
Q ss_pred hHHHHHhhhcccccccCccEEEEccCCC
Q 012954 201 HIKSVLGQIDENILRSGVDAILMDLGMS 228 (452)
Q Consensus 201 ~i~~~L~~~~~~l~~~~VDGILfDLGvS 228 (452)
++. . ...+|.|++|.-++
T Consensus 138 ~~~---~-------~~~~D~v~~~~~~~ 155 (241)
T 3gdh_A 138 LLA---S-------FLKADVVFLSPPWG 155 (241)
T ss_dssp HHG---G-------GCCCSEEEECCCCS
T ss_pred Hhc---c-------cCCCCEEEECCCcC
Confidence 653 1 23799999985554
No 59
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=97.55 E-value=0.00028 Score=67.79 Aligned_cols=78 Identities=13% Similarity=0.209 Sum_probs=62.7
Q ss_pred CCCCEEEEEccCCChhHHHHHHhCCC-CCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhc
Q 012954 132 RTITSFVDCTLGAAGHSSAIIRAHPE-LKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQID 210 (452)
Q Consensus 132 ~~ggiyVDaTlG~GGHS~aIL~~~p~-~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~ 210 (452)
+|+..++|.-+|.|..+..+++.++. ..+|+|+|..+.+|+.|+++++.++. ..+++++++++.++.
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~-----~~~v~~~~~D~~~~~------- 136 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKA-----PTPVDVIEGDIRDIA------- 136 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCC-----SSCEEEEESCTTTCC-------
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhcc-----CceEEEeeccccccc-------
Confidence 58999999999999999999988643 34799999999999999999987654 247889998876531
Q ss_pred ccccccCccEEEEcc
Q 012954 211 ENILRSGVDAILMDL 225 (452)
Q Consensus 211 ~~l~~~~VDGILfDL 225 (452)
...+|.|+..+
T Consensus 137 ----~~~~d~v~~~~ 147 (261)
T 4gek_A 137 ----IENASMVVLNF 147 (261)
T ss_dssp ----CCSEEEEEEES
T ss_pred ----ccccccceeee
Confidence 23578887654
No 60
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=97.55 E-value=0.00023 Score=63.43 Aligned_cols=95 Identities=12% Similarity=0.122 Sum_probs=74.0
Q ss_pred CCccccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEE
Q 012954 114 SSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTH 193 (452)
Q Consensus 114 ~~H~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~ 193 (452)
...+|.+...+++.+. ..++ .++|.-.|.|..+..+++. +. ..++|+|.++.+++.|++++...+. ..+++
T Consensus 26 ~~~~~~~~~~~~~~~~-~~~~-~vLdiG~G~G~~~~~l~~~-~~-~~v~~~D~s~~~~~~a~~~~~~~~~-----~~~~~ 96 (219)
T 3dlc_A 26 APIYPIIAENIINRFG-ITAG-TCIDIGSGPGALSIALAKQ-SD-FSIRALDFSKHMNEIALKNIADANL-----NDRIQ 96 (219)
T ss_dssp TTHHHHHHHHHHHHHC-CCEE-EEEEETCTTSHHHHHHHHH-SE-EEEEEEESCHHHHHHHHHHHHHTTC-----TTTEE
T ss_pred ccccHHHHHHHHHhcC-CCCC-EEEEECCCCCHHHHHHHHc-CC-CeEEEEECCHHHHHHHHHHHHhccc-----cCceE
Confidence 3457788899999886 3344 9999999999999999988 43 4799999999999999999877643 23788
Q ss_pred EEccCcchHHHHHhhhcccccccCccEEEEccC
Q 012954 194 TFAKNFRHIKSVLGQIDENILRSGVDAILMDLG 226 (452)
Q Consensus 194 li~~nF~~i~~~L~~~~~~l~~~~VDGILfDLG 226 (452)
+++.++.++. + ....+|.|+....
T Consensus 97 ~~~~d~~~~~--~-------~~~~~D~v~~~~~ 120 (219)
T 3dlc_A 97 IVQGDVHNIP--I-------EDNYADLIVSRGS 120 (219)
T ss_dssp EEECBTTBCS--S-------CTTCEEEEEEESC
T ss_pred EEEcCHHHCC--C-------CcccccEEEECch
Confidence 8898887642 1 1246999998743
No 61
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=97.55 E-value=0.00026 Score=65.20 Aligned_cols=84 Identities=12% Similarity=0.142 Sum_probs=65.6
Q ss_pred CCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhcc
Q 012954 132 RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDE 211 (452)
Q Consensus 132 ~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~ 211 (452)
.++..++|...|.|+.+..+++.+|. ++|+|+|+++.+++.|+++++..+. ..++.+++++.......+..
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~~~~~~--- 123 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALPE-ATIVSIERDERRYEEAHKHVKALGL-----ESRIELLFGDALQLGEKLEL--- 123 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCTT-CEEEEECCCHHHHHHHHHHHHHTTC-----TTTEEEECSCGGGSHHHHTT---
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEECCHHHHHHhccc---
Confidence 46789999999999999999998874 6799999999999999999887653 23688889887763222210
Q ss_pred cccccCccEEEEccCC
Q 012954 212 NILRSGVDAILMDLGM 227 (452)
Q Consensus 212 ~l~~~~VDGILfDLGv 227 (452)
...+|.|++|.+.
T Consensus 124 ---~~~fD~I~~~~~~ 136 (233)
T 2gpy_A 124 ---YPLFDVLFIDAAK 136 (233)
T ss_dssp ---SCCEEEEEEEGGG
T ss_pred ---CCCccEEEECCCH
Confidence 1369999998764
No 62
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=97.52 E-value=0.00029 Score=67.14 Aligned_cols=92 Identities=17% Similarity=0.120 Sum_probs=63.2
Q ss_pred ccccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhh-ccCCCCCCceEEE
Q 012954 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSL-LHGQAHPHLKTHT 194 (452)
Q Consensus 116 H~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~-~~~~~~~~~r~~l 194 (452)
-+|-....+++.+. ..++..++|.-.|.|+.+..+++.+.+.++|+|+|+++.+++.|+++++.. +. .++++
T Consensus 94 ~~~~~~~~~~~~~~-~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~------~~v~~ 166 (275)
T 1yb2_A 94 ISEIDASYIIMRCG-LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI------GNVRT 166 (275)
T ss_dssp ------------CC-CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCC------TTEEE
T ss_pred cChhhHHHHHHHcC-CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCC------CcEEE
Confidence 44445566777776 468899999999999999999988444468999999999999999988765 42 26888
Q ss_pred EccCcchHHHHHhhhcccccccCccEEEEc
Q 012954 195 FAKNFRHIKSVLGQIDENILRSGVDAILMD 224 (452)
Q Consensus 195 i~~nF~~i~~~L~~~~~~l~~~~VDGILfD 224 (452)
+++++.+ .+. ...+|.|++|
T Consensus 167 ~~~d~~~---~~~-------~~~fD~Vi~~ 186 (275)
T 1yb2_A 167 SRSDIAD---FIS-------DQMYDAVIAD 186 (275)
T ss_dssp ECSCTTT---CCC-------SCCEEEEEEC
T ss_pred EECchhc---cCc-------CCCccEEEEc
Confidence 8888764 111 2369999984
No 63
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=97.50 E-value=0.00031 Score=64.04 Aligned_cols=85 Identities=14% Similarity=-0.023 Sum_probs=63.6
Q ss_pred CCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhcc
Q 012954 132 RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDE 211 (452)
Q Consensus 132 ~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~ 211 (452)
.++..++|.-.|.|..+..+++.+++.++|+++|+++.+++.|+++++..+. ..++++++++..+...-+...+
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~-----~~~i~~~~~d~~~~~~~~~~~~- 141 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEA-----EHKIDLRLKPALETLDELLAAG- 141 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTC-----TTTEEEEESCHHHHHHHHHHTT-
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC-----CCeEEEEEcCHHHHHHHHHhcC-
Confidence 3568999999999999999998887667899999999999999998877643 2378888887754322222110
Q ss_pred cccccCccEEEEc
Q 012954 212 NILRSGVDAILMD 224 (452)
Q Consensus 212 ~l~~~~VDGILfD 224 (452)
....+|.|++|
T Consensus 142 --~~~~~D~v~~d 152 (229)
T 2avd_A 142 --EAGTFDVAVVD 152 (229)
T ss_dssp --CTTCEEEEEEC
T ss_pred --CCCCccEEEEC
Confidence 01369999985
No 64
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=97.50 E-value=0.0011 Score=60.57 Aligned_cols=84 Identities=13% Similarity=0.135 Sum_probs=56.0
Q ss_pred hHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcc
Q 012954 121 LGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFR 200 (452)
Q Consensus 121 l~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~ 200 (452)
|.|+++.+...+++..++|.-.|.|+-|..+++. .++|+|+|+++.+ . ..+++++++++.
T Consensus 13 L~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~~---------~--------~~~v~~~~~D~~ 72 (191)
T 3dou_A 13 LEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEME---------E--------IAGVRFIRCDIF 72 (191)
T ss_dssp HHHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTT---CSEEEEEESSCCC---------C--------CTTCEEEECCTT
T ss_pred HHHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHc---CCcEEEEeccccc---------c--------CCCeEEEEcccc
Confidence 5566766654468899999999999999999877 4689999999741 1 125778888876
Q ss_pred hHH--HHHhh-hcccccccCccEEEEcc
Q 012954 201 HIK--SVLGQ-IDENILRSGVDAILMDL 225 (452)
Q Consensus 201 ~i~--~~L~~-~~~~l~~~~VDGILfDL 225 (452)
+.. ..+.+ .+. -....+|.|+.|.
T Consensus 73 ~~~~~~~~~~~~~~-~~~~~~D~Vlsd~ 99 (191)
T 3dou_A 73 KETIFDDIDRALRE-EGIEKVDDVVSDA 99 (191)
T ss_dssp SSSHHHHHHHHHHH-HTCSSEEEEEECC
T ss_pred CHHHHHHHHHHhhc-ccCCcceEEecCC
Confidence 532 11111 100 0002689998864
No 65
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=97.48 E-value=0.00042 Score=70.44 Aligned_cols=94 Identities=15% Similarity=0.169 Sum_probs=72.1
Q ss_pred hhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHH
Q 012954 126 DVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSV 205 (452)
Q Consensus 126 ~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~ 205 (452)
..|. ++||..++|++.|-||-|.+|++..+. +.|+|+|+++.-++..+++++.++...-....++.+.+.+...+...
T Consensus 142 ~~L~-~~pg~~VLD~CAaPGGKT~~la~~~~~-~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~ 219 (359)
T 4fzv_A 142 LALG-LQPGDIVLDLCAAPGGKTLALLQTGCC-RNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGEL 219 (359)
T ss_dssp HHHC-CCTTEEEEESSCTTCHHHHHHHHTTCE-EEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHH
T ss_pred HHhC-CCCCCEEEEecCCccHHHHHHHHhcCC-CcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchh
Confidence 3455 579999999999999999999986544 67999999999999999988877542111224677777777766543
Q ss_pred HhhhcccccccCccEEEEccCCCc
Q 012954 206 LGQIDENILRSGVDAILMDLGMSS 229 (452)
Q Consensus 206 L~~~~~~l~~~~VDGILfDLGvSS 229 (452)
.. ..+|.||+|-=+|.
T Consensus 220 ~~--------~~fD~VLlDaPCSg 235 (359)
T 4fzv_A 220 EG--------DTYDRVLVDVPCTT 235 (359)
T ss_dssp ST--------TCEEEEEEECCCCC
T ss_pred cc--------ccCCEEEECCccCC
Confidence 22 36999999999985
No 66
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=97.47 E-value=0.00017 Score=69.24 Aligned_cols=85 Identities=12% Similarity=0.094 Sum_probs=63.8
Q ss_pred hhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHH
Q 012954 126 DVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSV 205 (452)
Q Consensus 126 ~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~ 205 (452)
+.|. .+||..++|.-+|.|..+..+.+..++.|+|||+|.++++++.++++.+.. .++..+...-.....+
T Consensus 71 ~~l~-ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~--------~ni~~V~~d~~~p~~~ 141 (233)
T 4df3_A 71 IELP-VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR--------RNIFPILGDARFPEKY 141 (233)
T ss_dssp SCCC-CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC--------TTEEEEESCTTCGGGG
T ss_pred hhcC-CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh--------cCeeEEEEeccCcccc
Confidence 4454 579999999999999888888888888899999999999999998765542 2567777666554332
Q ss_pred HhhhcccccccCccEEEEcc
Q 012954 206 LGQIDENILRSGVDAILMDL 225 (452)
Q Consensus 206 L~~~~~~l~~~~VDGILfDL 225 (452)
-. ....+|.|+.|+
T Consensus 142 ~~------~~~~vDvVf~d~ 155 (233)
T 4df3_A 142 RH------LVEGVDGLYADV 155 (233)
T ss_dssp TT------TCCCEEEEEECC
T ss_pred cc------ccceEEEEEEec
Confidence 11 124689888765
No 67
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=97.46 E-value=0.00016 Score=65.90 Aligned_cols=94 Identities=11% Similarity=0.120 Sum_probs=67.2
Q ss_pred chHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCc
Q 012954 120 MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNF 199 (452)
Q Consensus 120 Ll~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF 199 (452)
+.+.+++.|....++..++|...|.|+.+..+++... ..|+|+|+++.+++.|+++++..+.. ..+++++++++
T Consensus 40 ~~~~l~~~l~~~~~~~~vLDlGcGtG~~~~~~~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~----~~~v~~~~~d~ 113 (201)
T 2ift_A 40 VKETLFNWLMPYIHQSECLDGFAGSGSLGFEALSRQA--KKVTFLELDKTVANQLKKNLQTLKCS----SEQAEVINQSS 113 (201)
T ss_dssp HHHHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHHHHTTCC----TTTEEEECSCH
T ss_pred HHHHHHHHHHHhcCCCeEEEcCCccCHHHHHHHHccC--CEEEEEECCHHHHHHHHHHHHHhCCC----ccceEEEECCH
Confidence 4556666664211678999999999999998887632 47999999999999999988765420 02688888887
Q ss_pred chHHHHHhhhcccccccC-ccEEEEccC
Q 012954 200 RHIKSVLGQIDENILRSG-VDAILMDLG 226 (452)
Q Consensus 200 ~~i~~~L~~~~~~l~~~~-VDGILfDLG 226 (452)
.++ +... .... +|.|++|.-
T Consensus 114 ~~~---~~~~----~~~~~fD~I~~~~~ 134 (201)
T 2ift_A 114 LDF---LKQP----QNQPHFDVVFLDPP 134 (201)
T ss_dssp HHH---TTSC----CSSCCEEEEEECCC
T ss_pred HHH---HHhh----ccCCCCCEEEECCC
Confidence 543 2211 1246 999998644
No 68
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=97.44 E-value=0.00061 Score=62.14 Aligned_cols=106 Identities=12% Similarity=0.022 Sum_probs=74.0
Q ss_pred ccccchHHHHhhcc-CCCCCCEEEEEccCCChhHHHHHHhCC----CCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCc
Q 012954 116 HIPVMLGEVLDVFS-SSRTITSFVDCTLGAAGHSSAIIRAHP----ELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHL 190 (452)
Q Consensus 116 H~PVLl~Evl~~L~-~~~~ggiyVDaTlG~GGHS~aIL~~~p----~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~ 190 (452)
-.|-+...+++.|. ...++..++|.-.|.|..+..+++..+ +.+.|+|+|+++.+++.|+++++..+... ....
T Consensus 62 ~~p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~-~~~~ 140 (227)
T 2pbf_A 62 SAPHMHALSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPEL-LKID 140 (227)
T ss_dssp CCHHHHHHHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGG-GSST
T ss_pred CChHHHHHHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccc-cccC
Confidence 34567777888873 135788999999999999998888775 44689999999999999999887754100 0012
Q ss_pred eEEEEccCcchHH-HHHhhhcccccccCccEEEEccCCC
Q 012954 191 KTHTFAKNFRHIK-SVLGQIDENILRSGVDAILMDLGMS 228 (452)
Q Consensus 191 r~~li~~nF~~i~-~~L~~~~~~l~~~~VDGILfDLGvS 228 (452)
++++++.+..... ..... ...+|.|+.+.++.
T Consensus 141 ~v~~~~~d~~~~~~~~~~~------~~~fD~I~~~~~~~ 173 (227)
T 2pbf_A 141 NFKIIHKNIYQVNEEEKKE------LGLFDAIHVGASAS 173 (227)
T ss_dssp TEEEEECCGGGCCHHHHHH------HCCEEEEEECSBBS
T ss_pred CEEEEECChHhcccccCcc------CCCcCEEEECCchH
Confidence 6888888776521 00011 13699998886653
No 69
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=97.43 E-value=0.0004 Score=64.57 Aligned_cols=84 Identities=18% Similarity=0.013 Sum_probs=63.2
Q ss_pred CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhccc
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDEN 212 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~ 212 (452)
++..++|...|.|..+..+++.+++.++|+++|+++.+++.|+++++..+. ..++.++.++..+...-+...+
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~-----~~~i~~~~~d~~~~l~~l~~~~-- 144 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGV-----AEKISLRLGPALATLEQLTQGK-- 144 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC-----GGGEEEEESCHHHHHHHHHTSS--
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEEcCHHHHHHHHHhcC--
Confidence 567999999999999999998887667899999999999999998877643 2368888888654322221100
Q ss_pred ccccCccEEEEc
Q 012954 213 ILRSGVDAILMD 224 (452)
Q Consensus 213 l~~~~VDGILfD 224 (452)
....+|.|++|
T Consensus 145 -~~~~fD~V~~d 155 (232)
T 3cbg_A 145 -PLPEFDLIFID 155 (232)
T ss_dssp -SCCCEEEEEEC
T ss_pred -CCCCcCEEEEC
Confidence 00369999987
No 70
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=97.42 E-value=0.00057 Score=61.65 Aligned_cols=97 Identities=13% Similarity=0.060 Sum_probs=74.0
Q ss_pred ccccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEE
Q 012954 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTF 195 (452)
Q Consensus 116 H~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li 195 (452)
..|-++..+++.+. ..++..++|.-.|.|..+..+++..++..+|+|+|+++.+++.|++++...+. .++.++
T Consensus 61 ~~~~~~~~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~------~~v~~~ 133 (215)
T 2yxe_A 61 SAIHMVGMMCELLD-LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGY------DNVIVI 133 (215)
T ss_dssp CCHHHHHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTC------TTEEEE
T ss_pred CcHHHHHHHHHhhC-CCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCC------CCeEEE
Confidence 34667788888886 56888999999999999999998874446799999999999999998877643 257777
Q ss_pred ccCcchHHHHHhhhcccccccCccEEEEccCCC
Q 012954 196 AKNFRHIKSVLGQIDENILRSGVDAILMDLGMS 228 (452)
Q Consensus 196 ~~nF~~i~~~L~~~~~~l~~~~VDGILfDLGvS 228 (452)
+.+... .+.. ...+|.|+.+.++.
T Consensus 134 ~~d~~~---~~~~------~~~fD~v~~~~~~~ 157 (215)
T 2yxe_A 134 VGDGTL---GYEP------LAPYDRIYTTAAGP 157 (215)
T ss_dssp ESCGGG---CCGG------GCCEEEEEESSBBS
T ss_pred ECCccc---CCCC------CCCeeEEEECCchH
Confidence 777632 1111 23699999887653
No 71
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=97.38 E-value=0.0005 Score=62.68 Aligned_cols=81 Identities=16% Similarity=0.048 Sum_probs=61.7
Q ss_pred CCCCEEEEEccC-CChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhc
Q 012954 132 RTITSFVDCTLG-AAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQID 210 (452)
Q Consensus 132 ~~ggiyVDaTlG-~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~ 210 (452)
.+++.++|...| .|..+..+++.. ...|+|+|+|+.+++.|+++++..+. ++++++++...+..+
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~-------~v~~~~~d~~~~~~~----- 119 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNS-------NVRLVKSNGGIIKGV----- 119 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTC-------CCEEEECSSCSSTTT-----
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCC-------CcEEEeCCchhhhhc-----
Confidence 578999999999 999999888875 35799999999999999998876532 677888885432211
Q ss_pred ccccccCccEEEEccCCCc
Q 012954 211 ENILRSGVDAILMDLGMSS 229 (452)
Q Consensus 211 ~~l~~~~VDGILfDLGvSS 229 (452)
....+|.|+.|.-|..
T Consensus 120 ---~~~~fD~I~~npp~~~ 135 (230)
T 3evz_A 120 ---VEGTFDVIFSAPPYYD 135 (230)
T ss_dssp ---CCSCEEEEEECCCCC-
T ss_pred ---ccCceeEEEECCCCcC
Confidence 1246999999855533
No 72
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=97.37 E-value=0.00075 Score=64.58 Aligned_cols=95 Identities=13% Similarity=0.094 Sum_probs=75.0
Q ss_pred chHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCc
Q 012954 120 MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNF 199 (452)
Q Consensus 120 Ll~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF 199 (452)
+++.+++.+. ..++..++|.-.|.|+.+..+++.++ .+|+|+|+++.+++.|++++...+. ..++++++.++
T Consensus 60 ~~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~ 131 (302)
T 3hem_A 60 KRKLALDKLN-LEPGMTLLDIGCGWGSTMRHAVAEYD--VNVIGLTLSENQYAHDKAMFDEVDS-----PRRKEVRIQGW 131 (302)
T ss_dssp HHHHHHHTTC-CCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHHSCC-----SSCEEEEECCG
T ss_pred HHHHHHHHcC-CCCcCEEEEeeccCcHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcCC-----CCceEEEECCH
Confidence 5667888886 46888999999999999999998876 4699999999999999999877543 23788899988
Q ss_pred chHHHHHhhhcccccccCccEEEEccCCCccCCCCCC
Q 012954 200 RHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPE 236 (452)
Q Consensus 200 ~~i~~~L~~~~~~l~~~~VDGILfDLGvSS~QLDd~~ 236 (452)
.++ + ..+|.|+.... .+++.+++
T Consensus 132 ~~~-------~-----~~fD~v~~~~~--~~~~~d~~ 154 (302)
T 3hem_A 132 EEF-------D-----EPVDRIVSLGA--FEHFADGA 154 (302)
T ss_dssp GGC-------C-----CCCSEEEEESC--GGGTTCCS
T ss_pred HHc-------C-----CCccEEEEcch--HHhcCccc
Confidence 754 1 36999998743 34555553
No 73
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=97.37 E-value=0.00052 Score=65.00 Aligned_cols=85 Identities=11% Similarity=-0.023 Sum_probs=64.6
Q ss_pred CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhccc
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDEN 212 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~ 212 (452)
++..++|.-.|.|+.+..+++.+++.++|+++|+++.+++.|+++++..+. ..++++++++..+....+...+
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~-----~~~i~~~~gda~~~l~~l~~~~-- 151 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGV-----DHKIDFREGPALPVLDEMIKDE-- 151 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTC-----GGGEEEEESCHHHHHHHHHHSG--
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCCeEEEECCHHHHHHHHHhcc--
Confidence 567999999999999999999988667899999999999999998877543 2478888888765422221110
Q ss_pred ccccCccEEEEc
Q 012954 213 ILRSGVDAILMD 224 (452)
Q Consensus 213 l~~~~VDGILfD 224 (452)
.....+|.|++|
T Consensus 152 ~~~~~fD~V~~d 163 (247)
T 1sui_A 152 KNHGSYDFIFVD 163 (247)
T ss_dssp GGTTCBSEEEEC
T ss_pred CCCCCEEEEEEc
Confidence 001369999987
No 74
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=97.37 E-value=0.00027 Score=69.13 Aligned_cols=95 Identities=9% Similarity=0.094 Sum_probs=70.2
Q ss_pred CCCCccccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCce
Q 012954 112 QQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLK 191 (452)
Q Consensus 112 ~~~~H~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r 191 (452)
.++.+-|-+++.+++.+. ..++..++|.-.|.|..|..+++. .+.|+|+|+|+.+++.++++++..+. .+
T Consensus 22 q~fl~~~~i~~~i~~~~~-~~~~~~VLDiG~G~G~lt~~La~~---~~~v~~vDi~~~~~~~a~~~~~~~~~------~~ 91 (299)
T 2h1r_A 22 QHLLKNPGILDKIIYAAK-IKSSDIVLEIGCGTGNLTVKLLPL---AKKVITIDIDSRMISEVKKRCLYEGY------NN 91 (299)
T ss_dssp -CEECCHHHHHHHHHHHC-CCTTCEEEEECCTTSTTHHHHTTT---SSEEEEECSCHHHHHHHHHHHHHTTC------CC
T ss_pred cceecCHHHHHHHHHhcC-CCCcCEEEEEcCcCcHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCC------Cc
Confidence 344455668999999986 468889999999999999999876 24799999999999999998765432 26
Q ss_pred EEEEccCcchHHHHHhhhcccccccCccEEEEccCC
Q 012954 192 THTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGM 227 (452)
Q Consensus 192 ~~li~~nF~~i~~~L~~~~~~l~~~~VDGILfDLGv 227 (452)
++++++++..++ ...+|.|+.|+-|
T Consensus 92 v~~~~~D~~~~~-----------~~~~D~Vv~n~py 116 (299)
T 2h1r_A 92 LEVYEGDAIKTV-----------FPKFDVCTANIPY 116 (299)
T ss_dssp EEC----CCSSC-----------CCCCSEEEEECCG
T ss_pred eEEEECchhhCC-----------cccCCEEEEcCCc
Confidence 778887765431 1268999999764
No 75
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=97.36 E-value=0.00064 Score=64.60 Aligned_cols=88 Identities=9% Similarity=0.021 Sum_probs=66.1
Q ss_pred CCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhh---hccCCCCCCceEEEEccCcchHH-HHH
Q 012954 131 SRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNS---LLHGQAHPHLKTHTFAKNFRHIK-SVL 206 (452)
Q Consensus 131 ~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~---~~~~~~~~~~r~~li~~nF~~i~-~~L 206 (452)
..++..++|...|.|..+..+++..+. ..|+|+|+|+.+++.|+++++. .+. ..+++++++++.++. ..+
T Consensus 34 ~~~~~~VLDlG~G~G~~~l~la~~~~~-~~v~gvDi~~~~~~~a~~n~~~~~~~~l-----~~~v~~~~~D~~~~~~~~~ 107 (260)
T 2ozv_A 34 DDRACRIADLGAGAGAAGMAVAARLEK-AEVTLYERSQEMAEFARRSLELPDNAAF-----SARIEVLEADVTLRAKARV 107 (260)
T ss_dssp CCSCEEEEECCSSSSHHHHHHHHHCTT-EEEEEEESSHHHHHHHHHHTTSGGGTTT-----GGGEEEEECCTTCCHHHHH
T ss_pred ccCCCEEEEeCChHhHHHHHHHHhCCC-CeEEEEECCHHHHHHHHHHHHhhhhCCC-----cceEEEEeCCHHHHhhhhh
Confidence 346789999999999999999998875 5799999999999999998765 332 237899999987752 221
Q ss_pred hhhcccccccCccEEEEccCC
Q 012954 207 GQIDENILRSGVDAILMDLGM 227 (452)
Q Consensus 207 ~~~~~~l~~~~VDGILfDLGv 227 (452)
.+. +....+|.|+.|.-|
T Consensus 108 ~~~---~~~~~fD~Vv~nPPy 125 (260)
T 2ozv_A 108 EAG---LPDEHFHHVIMNPPY 125 (260)
T ss_dssp HTT---CCTTCEEEEEECCCC
T ss_pred hhc---cCCCCcCEEEECCCC
Confidence 110 112469999998444
No 76
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=97.36 E-value=0.00089 Score=61.77 Aligned_cols=95 Identities=9% Similarity=0.088 Sum_probs=74.4
Q ss_pred ccccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEE
Q 012954 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTF 195 (452)
Q Consensus 116 H~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li 195 (452)
..+-++..+++.+....++..++|.-.|.|..+..+++..+. .|+|+|+++.+++.|++++...+. ..+++++
T Consensus 29 ~~~~~~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~-----~~~~~~~ 101 (257)
T 3f4k_A 29 GSPEATRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVKG--QITGIDLFPDFIEIFNENAVKANC-----ADRVKGI 101 (257)
T ss_dssp CCHHHHHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCCS--EEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEE
T ss_pred CCHHHHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHHcCC-----CCceEEE
Confidence 445677888888854557889999999999999999998763 799999999999999998877653 2368888
Q ss_pred ccCcchHHHHHhhhcccccccCccEEEEccC
Q 012954 196 AKNFRHIKSVLGQIDENILRSGVDAILMDLG 226 (452)
Q Consensus 196 ~~nF~~i~~~L~~~~~~l~~~~VDGILfDLG 226 (452)
++++..+. + ....+|.|+....
T Consensus 102 ~~d~~~~~--~-------~~~~fD~v~~~~~ 123 (257)
T 3f4k_A 102 TGSMDNLP--F-------QNEELDLIWSEGA 123 (257)
T ss_dssp ECCTTSCS--S-------CTTCEEEEEEESC
T ss_pred ECChhhCC--C-------CCCCEEEEEecCh
Confidence 88886542 1 1246999988743
No 77
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=97.36 E-value=0.00031 Score=65.50 Aligned_cols=99 Identities=10% Similarity=0.021 Sum_probs=68.6
Q ss_pred chHHHHhhccCC-CCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccC
Q 012954 120 MLGEVLDVFSSS-RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKN 198 (452)
Q Consensus 120 Ll~Evl~~L~~~-~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~n 198 (452)
++.++++.+... .++..++|.-.|.|+.+..+++..+. .+|+|+|+++.+++.|+++++..+. ..++++++++
T Consensus 51 ~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d 124 (254)
T 2h00_A 51 WVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLNG-WYFLATEVDDMCFNYAKKNVEQNNL-----SDLIKVVKVP 124 (254)
T ss_dssp HHHHHHCCCCGGGCCCCEEEEESCTTTTHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEECC
T ss_pred HHHHHHhhccccCCCCCEEEEeCCChhHHHHHHHHhCCC-CeEEEEECCHHHHHHHHHHHHHcCC-----CccEEEEEcc
Confidence 555566555310 15679999999999999999988765 4799999999999999998876543 2368888887
Q ss_pred cch-HHHHHhhhcccccccCccEEEEccCCC
Q 012954 199 FRH-IKSVLGQIDENILRSGVDAILMDLGMS 228 (452)
Q Consensus 199 F~~-i~~~L~~~~~~l~~~~VDGILfDLGvS 228 (452)
..+ +.+.+...+ ...+|.|+.|.=|-
T Consensus 125 ~~~~~~~~~~~~~----~~~fD~i~~npp~~ 151 (254)
T 2h00_A 125 QKTLLMDALKEES----EIIYDFCMCNPPFF 151 (254)
T ss_dssp TTCSSTTTSTTCC----SCCBSEEEECCCCC
T ss_pred hhhhhhhhhhccc----CCcccEEEECCCCc
Confidence 554 211111100 13689999886543
No 78
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=97.35 E-value=0.00048 Score=63.22 Aligned_cols=96 Identities=14% Similarity=0.108 Sum_probs=72.8
Q ss_pred cccchHHHHhhcc-CCCCCCEEEEEccCCChhHHHHHHhCCC-----CCEEEEEeCCHHHHHHHHHHHhhhc-----cCC
Q 012954 117 IPVMLGEVLDVFS-SSRTITSFVDCTLGAAGHSSAIIRAHPE-----LKLHIGVDVDPSALAKARAHLNSLL-----HGQ 185 (452)
Q Consensus 117 ~PVLl~Evl~~L~-~~~~ggiyVDaTlG~GGHS~aIL~~~p~-----~g~VigfDrD~~Ai~~Ak~rL~~~~-----~~~ 185 (452)
.|.+...+++.|. ...++..++|.-.|.|..+..+++..+. .++|+|+|+++.+++.|++++...+ .
T Consensus 67 ~p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~-- 144 (227)
T 1r18_A 67 APHMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDS-- 144 (227)
T ss_dssp CHHHHHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHH--
T ss_pred ChHHHHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCC--
Confidence 6778888999884 2457889999999999999988886653 2479999999999999999887643 2
Q ss_pred CCCCceEEEEccCcchHHHHHhhhcccccccCccEEEEccCC
Q 012954 186 AHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGM 227 (452)
Q Consensus 186 ~~~~~r~~li~~nF~~i~~~L~~~~~~l~~~~VDGILfDLGv 227 (452)
.++++++.+... .+.. ...+|.|+.+.++
T Consensus 145 ----~~v~~~~~d~~~---~~~~------~~~fD~I~~~~~~ 173 (227)
T 1r18_A 145 ----GQLLIVEGDGRK---GYPP------NAPYNAIHVGAAA 173 (227)
T ss_dssp ----TSEEEEESCGGG---CCGG------GCSEEEEEECSCB
T ss_pred ----CceEEEECCccc---CCCc------CCCccEEEECCch
Confidence 267788877654 1111 1369999887665
No 79
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=97.31 E-value=0.00065 Score=65.85 Aligned_cols=97 Identities=12% Similarity=0.208 Sum_probs=76.5
Q ss_pred CCCCccccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCce
Q 012954 112 QQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLK 191 (452)
Q Consensus 112 ~~~~H~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r 191 (452)
.++-+-|-+++.+++.+. ..++..++|.-.|.|..|..+++.. .+|+|+|+|+.+++.+++++...+. ..+
T Consensus 8 q~fl~d~~i~~~i~~~~~-~~~~~~VLDiG~G~G~lt~~L~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~ 78 (285)
T 1zq9_A 8 QHILKNPLIINSIIDKAA-LRPTDVVLEVGPGTGNMTVKLLEKA---KKVVACELDPRLVAELHKRVQGTPV-----ASK 78 (285)
T ss_dssp CCEECCHHHHHHHHHHTC-CCTTCEEEEECCTTSTTHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTSTT-----GGG
T ss_pred cCccCCHHHHHHHHHhcC-CCCCCEEEEEcCcccHHHHHHHhhC---CEEEEEECCHHHHHHHHHHHHhcCC-----CCc
Confidence 455567778999999997 4688899999999999999999873 4699999999999999998765422 137
Q ss_pred EEEEccCcchHHHHHhhhcccccccCccEEEEccCCC
Q 012954 192 THTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMS 228 (452)
Q Consensus 192 ~~li~~nF~~i~~~L~~~~~~l~~~~VDGILfDLGvS 228 (452)
++++++++..++ ...+|.|+.|+-|+
T Consensus 79 v~~~~~D~~~~~-----------~~~fD~vv~nlpy~ 104 (285)
T 1zq9_A 79 LQVLVGDVLKTD-----------LPFFDTCVANLPYQ 104 (285)
T ss_dssp EEEEESCTTTSC-----------CCCCSEEEEECCGG
T ss_pred eEEEEcceeccc-----------chhhcEEEEecCcc
Confidence 888888876531 12588999988664
No 80
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=97.30 E-value=0.00036 Score=67.27 Aligned_cols=61 Identities=15% Similarity=0.137 Sum_probs=47.3
Q ss_pred chHHHHhhccCC-CCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhh
Q 012954 120 MLGEVLDVFSSS-RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSL 181 (452)
Q Consensus 120 Ll~Evl~~L~~~-~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~ 181 (452)
+.+.+++.|... .++..++|.-+|.|..+..|++.++.. .|+|+|+|+.+++.|++++..+
T Consensus 32 ~~~~~l~~l~~~~~~~~~VLDiGCG~G~~~~~la~~~~~~-~v~gvDis~~~i~~A~~~~~~~ 93 (292)
T 3g07_A 32 CEDGRLRVLKPEWFRGRDVLDLGCNVGHLTLSIACKWGPS-RMVGLDIDSRLIHSARQNIRHY 93 (292)
T ss_dssp --CGGGGTSCGGGTTTSEEEEESCTTCHHHHHHHHHTCCS-EEEEEESCHHHHHHHHHTC---
T ss_pred chhHHHHhhhhhhcCCCcEEEeCCCCCHHHHHHHHHcCCC-EEEEECCCHHHHHHHHHHHHhh
Confidence 666677777521 257899999999999999999988764 7999999999999999887654
No 81
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=97.30 E-value=0.00075 Score=61.48 Aligned_cols=101 Identities=13% Similarity=0.035 Sum_probs=72.0
Q ss_pred cccchHHHHhhcc-CCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEE
Q 012954 117 IPVMLGEVLDVFS-SSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTF 195 (452)
Q Consensus 117 ~PVLl~Evl~~L~-~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li 195 (452)
.|-+...+++.|. ...++..++|.-.|.|+.+..+++..++.++|+|+|+++.+++.|++++...+... ....++.++
T Consensus 60 ~p~~~~~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~-~~~~~v~~~ 138 (226)
T 1i1n_A 60 APHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTL-LSSGRVQLV 138 (226)
T ss_dssp CHHHHHHHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHH-HHTSSEEEE
T ss_pred CHHHHHHHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccc-cCCCcEEEE
Confidence 4556777788874 13578899999999999999999886555689999999999999999887642100 001267778
Q ss_pred ccCcchHHHHHhhhcccccccCccEEEEccCC
Q 012954 196 AKNFRHIKSVLGQIDENILRSGVDAILMDLGM 227 (452)
Q Consensus 196 ~~nF~~i~~~L~~~~~~l~~~~VDGILfDLGv 227 (452)
+.+.... ... ...+|.|+.+..+
T Consensus 139 ~~d~~~~---~~~------~~~fD~i~~~~~~ 161 (226)
T 1i1n_A 139 VGDGRMG---YAE------EAPYDAIHVGAAA 161 (226)
T ss_dssp ESCGGGC---CGG------GCCEEEEEECSBB
T ss_pred ECCcccC---ccc------CCCcCEEEECCch
Confidence 8776532 111 2369999888665
No 82
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=97.28 E-value=0.00089 Score=61.86 Aligned_cols=94 Identities=13% Similarity=0.146 Sum_probs=72.1
Q ss_pred ccccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEE
Q 012954 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTF 195 (452)
Q Consensus 116 H~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li 195 (452)
-.|-+...+++.+. ..++..++|.-.|.|..+..+++..+ .+|+|+|+++.+++.|+++++..+. .++.++
T Consensus 75 ~~~~~~~~~~~~l~-~~~~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~------~~v~~~ 145 (235)
T 1jg1_A 75 SAPHMVAIMLEIAN-LKPGMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGV------KNVHVI 145 (235)
T ss_dssp CCHHHHHHHHHHHT-CCTTCCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTC------CSEEEE
T ss_pred ccHHHHHHHHHhcC-CCCCCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCC------CCcEEE
Confidence 35678888999886 56888999999999999999988876 4699999999999999999877643 257777
Q ss_pred ccCcchHHHHHhhhcccccccCccEEEEccCC
Q 012954 196 AKNFRHIKSVLGQIDENILRSGVDAILMDLGM 227 (452)
Q Consensus 196 ~~nF~~i~~~L~~~~~~l~~~~VDGILfDLGv 227 (452)
.+++.. -+.. ...+|.|+.+.++
T Consensus 146 ~~d~~~---~~~~------~~~fD~Ii~~~~~ 168 (235)
T 1jg1_A 146 LGDGSK---GFPP------KAPYDVIIVTAGA 168 (235)
T ss_dssp ESCGGG---CCGG------GCCEEEEEECSBB
T ss_pred ECCccc---CCCC------CCCccEEEECCcH
Confidence 777621 1111 1248999987554
No 83
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=97.27 E-value=0.00063 Score=62.82 Aligned_cols=86 Identities=10% Similarity=0.077 Sum_probs=63.4
Q ss_pred hHHH---HhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEcc
Q 012954 121 LGEV---LDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAK 197 (452)
Q Consensus 121 l~Ev---l~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~ 197 (452)
+..+ ++.+. ..++..++|.-.|.|..+..+++.++ .++|+|+|+++.+++.|+++.+.. .++.++++
T Consensus 60 ~~~i~~~l~~~~-~~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~--------~~v~~~~~ 129 (230)
T 1fbn_A 60 AAAIIKGLKVMP-IKRDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAER--------ENIIPILG 129 (230)
T ss_dssp HHHHHTTCCCCC-CCTTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTTC--------TTEEEEEC
T ss_pred HHHHHhcccccC-CCCCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhcC--------CCeEEEEC
Confidence 4666 45553 35788999999999999999998887 468999999999999998875442 26888888
Q ss_pred CcchHHHHHhhhcccccccCccEEE
Q 012954 198 NFRHIKSVLGQIDENILRSGVDAIL 222 (452)
Q Consensus 198 nF~~i~~~L~~~~~~l~~~~VDGIL 222 (452)
+..+...++. + ...+|.|+
T Consensus 130 d~~~~~~~~~-----~-~~~~D~v~ 148 (230)
T 1fbn_A 130 DANKPQEYAN-----I-VEKVDVIY 148 (230)
T ss_dssp CTTCGGGGTT-----T-SCCEEEEE
T ss_pred CCCCcccccc-----c-CccEEEEE
Confidence 7765222111 1 13689888
No 84
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=97.27 E-value=0.0011 Score=65.84 Aligned_cols=91 Identities=11% Similarity=0.008 Sum_probs=72.4
Q ss_pred ccccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEE
Q 012954 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTF 195 (452)
Q Consensus 116 H~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li 195 (452)
++|+.-.|. ..+. .+++..++|.=.|.||-|..+|.+.+. ++|+|+|+|+++++.|+++++..+. .+++++
T Consensus 107 ~~~l~~~E~-~la~-l~~g~rVLDIGcG~G~~ta~~lA~~~g-a~V~gIDis~~~l~~Ar~~~~~~gl------~~v~~v 177 (298)
T 3fpf_A 107 YLELLKNEA-ALGR-FRRGERAVFIGGGPLPLTGILLSHVYG-MRVNVVEIEPDIAELSRKVIEGLGV------DGVNVI 177 (298)
T ss_dssp HHHHHHHHH-HHTT-CCTTCEEEEECCCSSCHHHHHHHHTTC-CEEEEEESSHHHHHHHHHHHHHHTC------CSEEEE
T ss_pred HHHHHHHHH-HHcC-CCCcCEEEEECCCccHHHHHHHHHccC-CEEEEEECCHHHHHHHHHHHHhcCC------CCeEEE
Confidence 556666675 4554 578999999999999999988888765 5799999999999999999887653 378999
Q ss_pred ccCcchHHHHHhhhcccccccCccEEEEccC
Q 012954 196 AKNFRHIKSVLGQIDENILRSGVDAILMDLG 226 (452)
Q Consensus 196 ~~nF~~i~~~L~~~~~~l~~~~VDGILfDLG 226 (452)
+++..++. + ..+|.|+.+.+
T Consensus 178 ~gDa~~l~------d-----~~FDvV~~~a~ 197 (298)
T 3fpf_A 178 TGDETVID------G-----LEFDVLMVAAL 197 (298)
T ss_dssp ESCGGGGG------G-----CCCSEEEECTT
T ss_pred ECchhhCC------C-----CCcCEEEECCC
Confidence 99887642 1 36999997654
No 85
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=97.26 E-value=0.00037 Score=63.45 Aligned_cols=90 Identities=11% Similarity=0.122 Sum_probs=65.3
Q ss_pred chHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCc
Q 012954 120 MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNF 199 (452)
Q Consensus 120 Ll~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF 199 (452)
+...+++.+....++..++|...|.|..+..+++... ..|+|+|+++.+++.|+++++..+. .++++++++.
T Consensus 41 ~~~~l~~~l~~~~~~~~vLDlgcG~G~~~~~l~~~~~--~~V~~vD~s~~~l~~a~~~~~~~~~------~~v~~~~~D~ 112 (202)
T 2fpo_A 41 VRETLFNWLAPVIVDAQCLDCFAGSGALGLEALSRYA--AGATLIEMDRAVSQQLIKNLATLKA------GNARVVNSNA 112 (202)
T ss_dssp HHHHHHHHHHHHHTTCEEEETTCTTCHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHHHHTTC------CSEEEECSCH
T ss_pred HHHHHHHHHHhhcCCCeEEEeCCCcCHHHHHHHhcCC--CEEEEEECCHHHHHHHHHHHHHcCC------CcEEEEECCH
Confidence 4455556654211678999999999999998887642 3799999999999999998876542 2688888876
Q ss_pred chHHHHHhhhcccccccCccEEEEcc
Q 012954 200 RHIKSVLGQIDENILRSGVDAILMDL 225 (452)
Q Consensus 200 ~~i~~~L~~~~~~l~~~~VDGILfDL 225 (452)
.+. +... ...+|.|++|.
T Consensus 113 ~~~---~~~~-----~~~fD~V~~~~ 130 (202)
T 2fpo_A 113 MSF---LAQK-----GTPHNIVFVDP 130 (202)
T ss_dssp HHH---HSSC-----CCCEEEEEECC
T ss_pred HHH---Hhhc-----CCCCCEEEECC
Confidence 542 2221 23699999763
No 86
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=97.26 E-value=0.0011 Score=63.74 Aligned_cols=93 Identities=13% Similarity=0.082 Sum_probs=70.1
Q ss_pred ccccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEE
Q 012954 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTF 195 (452)
Q Consensus 116 H~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li 195 (452)
-.|.+..|.+..+....++..++|+-.|.|+.+..+++..+. ++|+|+|.++.|++.|+++++..+. .++.++
T Consensus 102 ~~~~~~~e~~~~~~~~~~~~~VLDlgcG~G~~s~~la~~~~~-~~V~~vD~s~~av~~a~~n~~~n~l------~~~~~~ 174 (272)
T 3a27_A 102 WSQGNIEERKRMAFISNENEVVVDMFAGIGYFTIPLAKYSKP-KLVYAIEKNPTAYHYLCENIKLNKL------NNVIPI 174 (272)
T ss_dssp CCGGGHHHHHHHHTSCCTTCEEEETTCTTTTTHHHHHHHTCC-SEEEEEECCHHHHHHHHHHHHHTTC------SSEEEE
T ss_pred ECCCchHHHHHHHHhcCCCCEEEEecCcCCHHHHHHHHhCCC-CEEEEEeCCHHHHHHHHHHHHHcCC------CCEEEE
Confidence 345555566555543457889999999999999999988764 5799999999999999998876543 257788
Q ss_pred ccCcchHHHHHhhhcccccccCccEEEEcc
Q 012954 196 AKNFRHIKSVLGQIDENILRSGVDAILMDL 225 (452)
Q Consensus 196 ~~nF~~i~~~L~~~~~~l~~~~VDGILfDL 225 (452)
+++..++ .. + ..+|.|++|.
T Consensus 175 ~~d~~~~-~~----~-----~~~D~Vi~d~ 194 (272)
T 3a27_A 175 LADNRDV-EL----K-----DVADRVIMGY 194 (272)
T ss_dssp ESCGGGC-CC----T-----TCEEEEEECC
T ss_pred ECChHHc-Cc----c-----CCceEEEECC
Confidence 8887654 11 1 3699999883
No 87
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=97.26 E-value=0.0075 Score=53.18 Aligned_cols=83 Identities=16% Similarity=0.185 Sum_probs=54.8
Q ss_pred HHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCC--------CEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEE
Q 012954 123 EVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPEL--------KLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHT 194 (452)
Q Consensus 123 Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~--------g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~l 194 (452)
|+.+.+....++..++|.-.|.|+.+..+++.++.. ++|+|+|+++.+ . ..++++
T Consensus 12 ~l~~~~~~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~---------~--------~~~~~~ 74 (196)
T 2nyu_A 12 EVNERHQILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF---------P--------LEGATF 74 (196)
T ss_dssp HHHHHHCCCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC---------C--------CTTCEE
T ss_pred HHHHhcCCCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc---------c--------CCCCeE
Confidence 444444333578899999999999999999988753 689999999732 0 014667
Q ss_pred E-ccCcchHHHH--HhhhcccccccCccEEEEcc
Q 012954 195 F-AKNFRHIKSV--LGQIDENILRSGVDAILMDL 225 (452)
Q Consensus 195 i-~~nF~~i~~~--L~~~~~~l~~~~VDGILfDL 225 (452)
+ +.++.+.... +.+. +....+|.|+.|.
T Consensus 75 ~~~~d~~~~~~~~~~~~~---~~~~~fD~V~~~~ 105 (196)
T 2nyu_A 75 LCPADVTDPRTSQRILEV---LPGRRADVILSDM 105 (196)
T ss_dssp ECSCCTTSHHHHHHHHHH---SGGGCEEEEEECC
T ss_pred EEeccCCCHHHHHHHHHh---cCCCCCcEEEeCC
Confidence 7 7777664321 1111 0123699999864
No 88
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=97.26 E-value=0.0016 Score=58.28 Aligned_cols=74 Identities=22% Similarity=0.176 Sum_probs=59.1
Q ss_pred CCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhcc
Q 012954 132 RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDE 211 (452)
Q Consensus 132 ~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~ 211 (452)
.++..++|...|.|+.+..+++. +. +.|+|+|+++.+++.|+++++..+. +++++++++.++.
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~-~~-~~v~~vD~~~~~~~~a~~~~~~~~~-------~~~~~~~d~~~~~-------- 110 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLL-GA-KEVICVEVDKEAVDVLIENLGEFKG-------KFKVFIGDVSEFN-------- 110 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHT-TC-SEEEEEESCHHHHHHHHHHTGGGTT-------SEEEEESCGGGCC--------
T ss_pred CCcCEEEEeeCCCCHHHHHHHHc-CC-CEEEEEECCHHHHHHHHHHHHHcCC-------CEEEEECchHHcC--------
Confidence 46789999999999999998876 32 4699999999999999998765431 6888888876531
Q ss_pred cccccCccEEEEccC
Q 012954 212 NILRSGVDAILMDLG 226 (452)
Q Consensus 212 ~l~~~~VDGILfDLG 226 (452)
..+|.|++|.=
T Consensus 111 ----~~~D~v~~~~p 121 (207)
T 1wy7_A 111 ----SRVDIVIMNPP 121 (207)
T ss_dssp ----CCCSEEEECCC
T ss_pred ----CCCCEEEEcCC
Confidence 26999998754
No 89
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=97.24 E-value=0.0014 Score=60.96 Aligned_cols=79 Identities=9% Similarity=0.169 Sum_probs=63.2
Q ss_pred CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchH-HHHHhhhcc
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHI-KSVLGQIDE 211 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i-~~~L~~~~~ 211 (452)
++..++|.-+|.|.++..+.+..|+. .|+|+|+++.+++.|+++++..+. .++.+++++..++ ...+.
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~-~v~giD~s~~~l~~a~~~~~~~~l------~nv~~~~~Da~~~l~~~~~---- 102 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQ-DFLGIEVHSPGVGACLASAHEEGL------SNLRVMCHDAVEVLHKMIP---- 102 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTS-EEEEECSCHHHHHHHHHHHHHTTC------SSEEEECSCHHHHHHHHSC----
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCC-eEEEEEecHHHHHHHHHHHHHhCC------CcEEEEECCHHHHHHHHcC----
Confidence 67899999999999999999988874 699999999999999998876543 3688999987764 22232
Q ss_pred cccccCccEEEEcc
Q 012954 212 NILRSGVDAILMDL 225 (452)
Q Consensus 212 ~l~~~~VDGILfDL 225 (452)
...+|.|++++
T Consensus 103 ---~~~~d~v~~~~ 113 (218)
T 3dxy_A 103 ---DNSLRMVQLFF 113 (218)
T ss_dssp ---TTCEEEEEEES
T ss_pred ---CCChheEEEeC
Confidence 24699998764
No 90
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=97.24 E-value=0.00084 Score=65.53 Aligned_cols=97 Identities=12% Similarity=0.089 Sum_probs=75.6
Q ss_pred ccccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEE
Q 012954 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTF 195 (452)
Q Consensus 116 H~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li 195 (452)
..|-++..+++.+. ..++..++|.-.|.|+.+..+++..+..++|+|+|.++++++.|+++++..+. .++.++
T Consensus 59 ~~~~~~~~l~~~l~-~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~------~~v~~~ 131 (317)
T 1dl5_A 59 SQPSLMALFMEWVG-LDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGI------ENVIFV 131 (317)
T ss_dssp CCHHHHHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTC------CSEEEE
T ss_pred cCHHHHHHHHHhcC-CCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCC------CCeEEE
Confidence 35678888999886 56889999999999999988888766446799999999999999999876543 257888
Q ss_pred ccCcchHHHHHhhhcccccccCccEEEEccCCC
Q 012954 196 AKNFRHIKSVLGQIDENILRSGVDAILMDLGMS 228 (452)
Q Consensus 196 ~~nF~~i~~~L~~~~~~l~~~~VDGILfDLGvS 228 (452)
+.++.+. +.. ...+|.|+.+.++.
T Consensus 132 ~~d~~~~---~~~------~~~fD~Iv~~~~~~ 155 (317)
T 1dl5_A 132 CGDGYYG---VPE------FSPYDVIFVTVGVD 155 (317)
T ss_dssp ESCGGGC---CGG------GCCEEEEEECSBBS
T ss_pred ECChhhc---ccc------CCCeEEEEEcCCHH
Confidence 8877642 111 13689999887654
No 91
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=97.23 E-value=0.0019 Score=61.35 Aligned_cols=90 Identities=17% Similarity=0.214 Sum_probs=71.1
Q ss_pred cchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccC
Q 012954 119 VMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKN 198 (452)
Q Consensus 119 VLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~n 198 (452)
.|+..+++.+. .++..++|...|.|..+..+++..+. ..|+|+|+++.+++.|+++.+.++. .++++++++
T Consensus 97 ~l~~~~l~~~~--~~~~~vLDlG~GsG~~~~~la~~~~~-~~v~~vD~s~~~l~~a~~n~~~~~~------~~v~~~~~d 167 (276)
T 2b3t_A 97 CLVEQALARLP--EQPCRILDLGTGTGAIALALASERPD-CEIIAVDRMPDAVSLAQRNAQHLAI------KNIHILQSD 167 (276)
T ss_dssp HHHHHHHHHSC--SSCCEEEEETCTTSHHHHHHHHHCTT-SEEEEECSSHHHHHHHHHHHHHHTC------CSEEEECCS
T ss_pred HHHHHHHHhcc--cCCCEEEEecCCccHHHHHHHHhCCC-CEEEEEECCHHHHHHHHHHHHHcCC------CceEEEEcc
Confidence 47778888874 46789999999999999999988876 4799999999999999998877643 268888888
Q ss_pred cchHHHHHhhhcccccccCccEEEEccCC
Q 012954 199 FRHIKSVLGQIDENILRSGVDAILMDLGM 227 (452)
Q Consensus 199 F~~i~~~L~~~~~~l~~~~VDGILfDLGv 227 (452)
+... +. ...+|.|+.|.-|
T Consensus 168 ~~~~---~~-------~~~fD~Iv~npPy 186 (276)
T 2b3t_A 168 WFSA---LA-------GQQFAMIVSNPPY 186 (276)
T ss_dssp TTGG---GT-------TCCEEEEEECCCC
T ss_pred hhhh---cc-------cCCccEEEECCCC
Confidence 7542 11 1369999987554
No 92
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=97.19 E-value=0.00077 Score=66.55 Aligned_cols=96 Identities=9% Similarity=0.041 Sum_probs=77.4
Q ss_pred CCCCccccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCce
Q 012954 112 QQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLK 191 (452)
Q Consensus 112 ~~~~H~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r 191 (452)
.++-+-|-+++.+++.+. ..++..++|.-.|.|.-|..+++. .++|+|+|+|+.+++.++++++.+ .+
T Consensus 30 QnfL~d~~i~~~Iv~~l~-~~~~~~VLEIG~G~G~lT~~La~~---~~~V~aVEid~~li~~a~~~~~~~--------~~ 97 (295)
T 3gru_A 30 QCFLIDKNFVNKAVESAN-LTKDDVVLEIGLGKGILTEELAKN---AKKVYVIEIDKSLEPYANKLKELY--------NN 97 (295)
T ss_dssp CCEECCHHHHHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCGGGHHHHHHHHHHC--------SS
T ss_pred ccccCCHHHHHHHHHhcC-CCCcCEEEEECCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHhccC--------CC
Confidence 456677888999999997 568899999999999999999987 257999999999999999988632 26
Q ss_pred EEEEccCcchHHHHHhhhcccccccCccEEEEccCCC
Q 012954 192 THTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMS 228 (452)
Q Consensus 192 ~~li~~nF~~i~~~L~~~~~~l~~~~VDGILfDLGvS 228 (452)
++++++++..++ +. ...+|.|+.|+-|.
T Consensus 98 v~vi~gD~l~~~--~~-------~~~fD~Iv~NlPy~ 125 (295)
T 3gru_A 98 IEIIWGDALKVD--LN-------KLDFNKVVANLPYQ 125 (295)
T ss_dssp EEEEESCTTTSC--GG-------GSCCSEEEEECCGG
T ss_pred eEEEECchhhCC--cc-------cCCccEEEEeCccc
Confidence 889999887542 11 12589999998763
No 93
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=97.18 E-value=0.00075 Score=69.23 Aligned_cols=92 Identities=14% Similarity=0.208 Sum_probs=69.3
Q ss_pred ccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEcc
Q 012954 118 PVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAK 197 (452)
Q Consensus 118 PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~ 197 (452)
..|++.+++.+. ..++..++|+..|.|..+..+.+. ...|+|+|++++|++.|+++++..+. .+++++++
T Consensus 272 e~l~~~~~~~l~-~~~~~~VLDlgcG~G~~~~~la~~---~~~V~gvD~s~~al~~A~~n~~~~~~------~~v~f~~~ 341 (433)
T 1uwv_A 272 QKMVARALEWLD-VQPEDRVLDLFCGMGNFTLPLATQ---AASVVGVEGVPALVEKGQQNARLNGL------QNVTFYHE 341 (433)
T ss_dssp HHHHHHHHHHHT-CCTTCEEEEESCTTTTTHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHTTC------CSEEEEEC
T ss_pred HHHHHHHHHhhc-CCCCCEEEECCCCCCHHHHHHHhh---CCEEEEEeCCHHHHHHHHHHHHHcCC------CceEEEEC
Confidence 458888999886 457789999999999999998876 35799999999999999998876542 26888888
Q ss_pred CcchHHHHHhhhcccccccCccEEEEc
Q 012954 198 NFRHIKSVLGQIDENILRSGVDAILMD 224 (452)
Q Consensus 198 nF~~i~~~L~~~~~~l~~~~VDGILfD 224 (452)
+..+. +.... +....+|.|++|
T Consensus 342 d~~~~---l~~~~--~~~~~fD~Vv~d 363 (433)
T 1uwv_A 342 NLEED---VTKQP--WAKNGFDKVLLD 363 (433)
T ss_dssp CTTSC---CSSSG--GGTTCCSEEEEC
T ss_pred CHHHH---hhhhh--hhcCCCCEEEEC
Confidence 87652 11100 012369999974
No 94
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=97.18 E-value=0.0021 Score=58.62 Aligned_cols=91 Identities=9% Similarity=-0.033 Sum_probs=71.0
Q ss_pred ccccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEE
Q 012954 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTF 195 (452)
Q Consensus 116 H~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li 195 (452)
..|-++..+++.+. ..++..++|.-.|.|..+..+++.. ..|+|+|+++.+++.|++++...+ ++.++
T Consensus 54 ~~~~~~~~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~--------~v~~~ 121 (231)
T 1vbf_A 54 TALNLGIFMLDELD-LHKGQKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYYN--------NIKLI 121 (231)
T ss_dssp CCHHHHHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTCS--------SEEEE
T ss_pred CCHHHHHHHHHhcC-CCCCCEEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhcC--------CeEEE
Confidence 46677888898886 4688899999999999999888875 579999999999999999876531 57778
Q ss_pred ccCcchHHHHHhhhcccccccCccEEEEccCC
Q 012954 196 AKNFRHIKSVLGQIDENILRSGVDAILMDLGM 227 (452)
Q Consensus 196 ~~nF~~i~~~L~~~~~~l~~~~VDGILfDLGv 227 (452)
+++.... +.. ...+|.|+.+..+
T Consensus 122 ~~d~~~~---~~~------~~~fD~v~~~~~~ 144 (231)
T 1vbf_A 122 LGDGTLG---YEE------EKPYDRVVVWATA 144 (231)
T ss_dssp ESCGGGC---CGG------GCCEEEEEESSBB
T ss_pred ECCcccc---ccc------CCCccEEEECCcH
Confidence 8877541 111 2369999988654
No 95
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=97.17 E-value=0.0013 Score=61.94 Aligned_cols=85 Identities=12% Similarity=0.185 Sum_probs=61.6
Q ss_pred CCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcch-HHHHHhhhc
Q 012954 132 RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRH-IKSVLGQID 210 (452)
Q Consensus 132 ~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~-i~~~L~~~~ 210 (452)
.++..++|.-+|.|.++..+.+..|.. .|+|+|+++.+++.|+++++...........++.+++++... +..++..
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~-~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~-- 121 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDT-LILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYK-- 121 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTS-EEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCT--
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCC-eEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCC--
Confidence 356789999999999999999888764 699999999999999887654210000012368899998775 6555432
Q ss_pred ccccccCccEEEEc
Q 012954 211 ENILRSGVDAILMD 224 (452)
Q Consensus 211 ~~l~~~~VDGILfD 224 (452)
..+|.|++.
T Consensus 122 -----~~~D~v~~~ 130 (235)
T 3ckk_A 122 -----GQLTKMFFL 130 (235)
T ss_dssp -----TCEEEEEEE
T ss_pred -----cCeeEEEEe
Confidence 368988764
No 96
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=97.14 E-value=0.001 Score=62.14 Aligned_cols=85 Identities=13% Similarity=0.215 Sum_probs=60.3
Q ss_pred CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCC--CCceEEEEccCcch-HHHHHhhh
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAH--PHLKTHTFAKNFRH-IKSVLGQI 209 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~--~~~r~~li~~nF~~-i~~~L~~~ 209 (452)
++..++|+-+|.|+.+..+++..+. ..|+|+|+++.+++.|+++++........ +..++.+++++..+ +...+.
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~-- 125 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPE-DLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFE-- 125 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTT-SEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSC--
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCC-CCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcc--
Confidence 5779999999999999999998875 46999999999999999887654100000 01368888887654 332221
Q ss_pred cccccccCccEEEEcc
Q 012954 210 DENILRSGVDAILMDL 225 (452)
Q Consensus 210 ~~~l~~~~VDGILfDL 225 (452)
...+|.|++++
T Consensus 126 -----~~~~d~v~~~~ 136 (246)
T 2vdv_E 126 -----KGQLSKMFFCF 136 (246)
T ss_dssp -----TTCEEEEEEES
T ss_pred -----ccccCEEEEEC
Confidence 23688888654
No 97
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=97.14 E-value=0.0015 Score=63.41 Aligned_cols=91 Identities=13% Similarity=0.143 Sum_probs=70.5
Q ss_pred cchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccC
Q 012954 119 VMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKN 198 (452)
Q Consensus 119 VLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~n 198 (452)
.|++.+++.+. ..++..++|...|.|..+..++.. +. ..|+|+|+++.|++.|+++++.++. ..++++++++
T Consensus 110 ~lv~~~l~~~~-~~~~~~vLDlG~GsG~~~~~la~~-~~-~~v~~vDis~~al~~A~~n~~~~~l-----~~~v~~~~~D 181 (284)
T 1nv8_A 110 ELVELALELIR-KYGIKTVADIGTGSGAIGVSVAKF-SD-AIVFATDVSSKAVEIARKNAERHGV-----SDRFFVRKGE 181 (284)
T ss_dssp HHHHHHHHHHH-HHTCCEEEEESCTTSHHHHHHHHH-SS-CEEEEEESCHHHHHHHHHHHHHTTC-----TTSEEEEESS
T ss_pred HHHHHHHHHhc-ccCCCEEEEEeCchhHHHHHHHHC-CC-CEEEEEECCHHHHHHHHHHHHHcCC-----CCceEEEECc
Confidence 47777888775 236679999999999999999988 55 5799999999999999998877643 2368899988
Q ss_pred cchHHHHHhhhcccccccCc---cEEEEccCCC
Q 012954 199 FRHIKSVLGQIDENILRSGV---DAILMDLGMS 228 (452)
Q Consensus 199 F~~i~~~L~~~~~~l~~~~V---DGILfDLGvS 228 (452)
+... +. ..+ |.|+.|-=|.
T Consensus 182 ~~~~---~~--------~~f~~~D~IvsnPPyi 203 (284)
T 1nv8_A 182 FLEP---FK--------EKFASIEMILSNPPYV 203 (284)
T ss_dssp TTGG---GG--------GGTTTCCEEEECCCCB
T ss_pred chhh---cc--------cccCCCCEEEEcCCCC
Confidence 7642 11 146 9999885443
No 98
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.14 E-value=0.0013 Score=68.02 Aligned_cols=80 Identities=19% Similarity=0.145 Sum_probs=61.9
Q ss_pred CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhh--ccCCCCCCceEEEEccCcch-HHHHHhhh
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSL--LHGQAHPHLKTHTFAKNFRH-IKSVLGQI 209 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~--~~~~~~~~~r~~li~~nF~~-i~~~L~~~ 209 (452)
++..++|++.|.|+.+.++... ..+|+|+|+|+.+++.|+++++.+ +. .++++++++... +.. +.
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~---g~~V~~VD~s~~~l~~Ar~N~~~~~~gl------~~i~~i~~Da~~~L~~-~~-- 160 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSK---ASQGIYIERNDETAVAARHNIPLLLNEG------KDVNILTGDFKEYLPL-IK-- 160 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTT---CSEEEEEESCHHHHHHHHHHHHHHSCTT------CEEEEEESCGGGSHHH-HH--
T ss_pred CCCEEEEeCCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHhHHHhccCC------CcEEEEECcHHHhhhh-cc--
Confidence 4789999999999998877654 247999999999999999998876 32 378999998765 332 11
Q ss_pred cccccccCccEEEEccCCCc
Q 012954 210 DENILRSGVDAILMDLGMSS 229 (452)
Q Consensus 210 ~~~l~~~~VDGILfDLGvSS 229 (452)
...+|.|++|=-+..
T Consensus 161 -----~~~fDvV~lDPPrr~ 175 (410)
T 3ll7_A 161 -----TFHPDYIYVDPARRS 175 (410)
T ss_dssp -----HHCCSEEEECCEEC-
T ss_pred -----CCCceEEEECCCCcC
Confidence 136999999877654
No 99
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=97.13 E-value=0.0035 Score=65.50 Aligned_cols=84 Identities=15% Similarity=0.073 Sum_probs=67.9
Q ss_pred CCccccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhh-------hccCCC
Q 012954 114 SSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNS-------LLHGQA 186 (452)
Q Consensus 114 ~~H~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~-------~~~~~~ 186 (452)
....|-++.++++.+. ..++..++|.-.|.|.-+..+....+. .+++|+|+++.+++.|+++++. ++..
T Consensus 155 GEt~~~~i~~il~~l~-l~~gd~VLDLGCGtG~l~l~lA~~~g~-~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~-- 230 (438)
T 3uwp_A 155 GETSFDLVAQMIDEIK-MTDDDLFVDLGSGVGQVVLQVAAATNC-KHHYGVEKADIPAKYAETMDREFRKWMKWYGKK-- 230 (438)
T ss_dssp GGTHHHHHHHHHHHHC-CCTTCEEEEESCTTSHHHHHHHHHCCC-SEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBC--
T ss_pred CCCCHHHHHHHHHhcC-CCCCCEEEEeCCCCCHHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCC--
Confidence 4466888999999997 579999999999999999988877764 4699999999999999875532 2211
Q ss_pred CCCceEEEEccCcchHH
Q 012954 187 HPHLKTHTFAKNFRHIK 203 (452)
Q Consensus 187 ~~~~r~~li~~nF~~i~ 203 (452)
..++++++++|.+++
T Consensus 231 --~~rVefi~GD~~~lp 245 (438)
T 3uwp_A 231 --HAEYTLERGDFLSEE 245 (438)
T ss_dssp --CCEEEEEECCTTSHH
T ss_pred --CCCeEEEECcccCCc
Confidence 148999999998875
No 100
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=97.12 E-value=0.0016 Score=63.94 Aligned_cols=99 Identities=16% Similarity=0.130 Sum_probs=73.1
Q ss_pred CccccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEE
Q 012954 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHT 194 (452)
Q Consensus 115 ~H~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~l 194 (452)
+-.|-+..|-.......++|.+++|+-.|.|+-|..++.. +. .+|+|+|++|.|++.++++++..+. .+++++
T Consensus 107 ~f~~~~~~er~ri~~~~~~g~~VlD~~aG~G~~~i~~a~~-g~-~~V~avD~np~a~~~~~~N~~~N~v-----~~~v~~ 179 (278)
T 3k6r_A 107 MFSPANVKERVRMAKVAKPDELVVDMFAGIGHLSLPIAVY-GK-AKVIAIEKDPYTFKFLVENIHLNKV-----EDRMSA 179 (278)
T ss_dssp CCCGGGHHHHHHHHHHCCTTCEEEETTCTTTTTTHHHHHH-TC-CEEEEECCCHHHHHHHHHHHHHTTC-----TTTEEE
T ss_pred EEcCCcHHHHHHHHHhcCCCCEEEEecCcCcHHHHHHHHh-cC-CeEEEEECCHHHHHHHHHHHHHcCC-----CCcEEE
Confidence 4556666664444332358999999999999999998876 33 4799999999999999998876653 347888
Q ss_pred EccCcchHHHHHhhhcccccccCccEEEEccCCCcc
Q 012954 195 FAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSM 230 (452)
Q Consensus 195 i~~nF~~i~~~L~~~~~~l~~~~VDGILfDLGvSS~ 230 (452)
++++...+ .. ...+|-|++|+=.++.
T Consensus 180 ~~~D~~~~---~~-------~~~~D~Vi~~~p~~~~ 205 (278)
T 3k6r_A 180 YNMDNRDF---PG-------ENIADRILMGYVVRTH 205 (278)
T ss_dssp ECSCTTTC---CC-------CSCEEEEEECCCSSGG
T ss_pred EeCcHHHh---cc-------ccCCCEEEECCCCcHH
Confidence 88876543 11 2468999998766553
No 101
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=97.10 E-value=0.0017 Score=60.73 Aligned_cols=95 Identities=9% Similarity=0.085 Sum_probs=71.8
Q ss_pred cccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEc
Q 012954 117 IPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196 (452)
Q Consensus 117 ~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~ 196 (452)
.+-++..+++.+....++..++|.-.|.|..+..+++. +. ..|+|+|.++.+++.|+++++..+. ..++.+++
T Consensus 30 ~~~~~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~-~~-~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~ 102 (267)
T 3kkz_A 30 SPEVTLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGH-VT-GQVTGLDFLSGFIDIFNRNARQSGL-----QNRVTGIV 102 (267)
T ss_dssp CHHHHHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTT-CS-SEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEE
T ss_pred CHHHHHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhc-cC-CEEEEEeCCHHHHHHHHHHHHHcCC-----CcCcEEEE
Confidence 34456777888763457899999999999999998877 44 4799999999999999998877643 23688888
Q ss_pred cCcchHHHHHhhhcccccccCccEEEEccCC
Q 012954 197 KNFRHIKSVLGQIDENILRSGVDAILMDLGM 227 (452)
Q Consensus 197 ~nF~~i~~~L~~~~~~l~~~~VDGILfDLGv 227 (452)
+++.++. + ....+|.|+....+
T Consensus 103 ~d~~~~~--~-------~~~~fD~i~~~~~~ 124 (267)
T 3kkz_A 103 GSMDDLP--F-------RNEELDLIWSEGAI 124 (267)
T ss_dssp CCTTSCC--C-------CTTCEEEEEESSCG
T ss_pred cChhhCC--C-------CCCCEEEEEEcCCc
Confidence 8886642 1 12468988876443
No 102
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=97.07 E-value=0.0011 Score=62.05 Aligned_cols=88 Identities=15% Similarity=0.101 Sum_probs=63.4
Q ss_pred HHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHH
Q 012954 124 VLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIK 203 (452)
Q Consensus 124 vl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~ 203 (452)
..+.+. .+|+.++|.=+|.|..+..|++..+. .++|+|+++.+++.|+++.+..+ .++.++.++...+
T Consensus 53 ~a~~~~--~~G~rVLdiG~G~G~~~~~~~~~~~~--~v~~id~~~~~~~~a~~~~~~~~-------~~~~~~~~~a~~~- 120 (236)
T 3orh_A 53 LAAAAS--SKGGRVLEVGFGMAIAASKVQEAPID--EHWIIECNDGVFQRLRDWAPRQT-------HKVIPLKGLWEDV- 120 (236)
T ss_dssp HHHHHT--TTCEEEEEECCTTSHHHHHHTTSCEE--EEEEEECCHHHHHHHHHHGGGCS-------SEEEEEESCHHHH-
T ss_pred HHHhhc--cCCCeEEEECCCccHHHHHHHHhCCc--EEEEEeCCHHHHHHHHHHHhhCC-------CceEEEeehHHhh-
Confidence 344443 48899999999999888888766553 58999999999999999876543 3677777766543
Q ss_pred HHHhhhcccccccCccEEEEccCCCc
Q 012954 204 SVLGQIDENILRSGVDAILMDLGMSS 229 (452)
Q Consensus 204 ~~L~~~~~~l~~~~VDGILfDLGvSS 229 (452)
+... ....+|+|+||-=+++
T Consensus 121 --~~~~----~~~~FD~i~~D~~~~~ 140 (236)
T 3orh_A 121 --APTL----PDGHFDGILYDTYPLS 140 (236)
T ss_dssp --GGGS----CTTCEEEEEECCCCCB
T ss_pred --cccc----cccCCceEEEeeeecc
Confidence 2222 1346999999854443
No 103
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=97.06 E-value=0.0021 Score=61.23 Aligned_cols=92 Identities=15% Similarity=0.109 Sum_probs=71.1
Q ss_pred ccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEcc
Q 012954 118 PVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAK 197 (452)
Q Consensus 118 PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~ 197 (452)
|-++..+++.+....++..++|.-.|.|..+..+++.+|+...|+|+|.++.+++.|++++...+ .++.++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-------~~v~~~~~ 79 (284)
T 3gu3_A 7 DDYVSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLP-------YDSEFLEG 79 (284)
T ss_dssp HHHHHHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSS-------SEEEEEES
T ss_pred hHHHHHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcC-------CceEEEEc
Confidence 34556666666434578899999999999999999988865689999999999999999876542 27888888
Q ss_pred CcchHHHHHhhhcccccccCccEEEEccC
Q 012954 198 NFRHIKSVLGQIDENILRSGVDAILMDLG 226 (452)
Q Consensus 198 nF~~i~~~L~~~~~~l~~~~VDGILfDLG 226 (452)
++.++. . ...+|.|+....
T Consensus 80 d~~~~~----~------~~~fD~v~~~~~ 98 (284)
T 3gu3_A 80 DATEIE----L------NDKYDIAICHAF 98 (284)
T ss_dssp CTTTCC----C------SSCEEEEEEESC
T ss_pred chhhcC----c------CCCeeEEEECCh
Confidence 877531 0 136899988764
No 104
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=97.04 E-value=0.0019 Score=59.44 Aligned_cols=90 Identities=14% Similarity=0.098 Sum_probs=69.9
Q ss_pred ccccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEE
Q 012954 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTF 195 (452)
Q Consensus 116 H~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li 195 (452)
..|-++..+++.+. ..++..++|.-.|.|..+..+++.++ ..++|+|.++.+++.|+++++..+. ..++.++
T Consensus 20 ~~~~~~~~l~~~~~-~~~~~~VLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~-----~~~v~~~ 91 (256)
T 1nkv_A 20 FTEEKYATLGRVLR-MKPGTRILDLGSGSGEMLCTWARDHG--ITGTGIDMSSLFTAQAKRRAEELGV-----SERVHFI 91 (256)
T ss_dssp CCHHHHHHHHHHTC-CCTTCEEEEETCTTCHHHHHHHHHTC--CEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEE
T ss_pred CCHHHHHHHHHhcC-CCCCCEEEEECCCCCHHHHHHHHhcC--CeEEEEeCCHHHHHHHHHHHHhcCC-----CcceEEE
Confidence 45557888888886 46889999999999998998888873 3689999999999999998876543 1368888
Q ss_pred ccCcchHHHHHhhhcccccccCccEEEE
Q 012954 196 AKNFRHIKSVLGQIDENILRSGVDAILM 223 (452)
Q Consensus 196 ~~nF~~i~~~L~~~~~~l~~~~VDGILf 223 (452)
++++.++.. ...+|.|+.
T Consensus 92 ~~d~~~~~~----------~~~fD~V~~ 109 (256)
T 1nkv_A 92 HNDAAGYVA----------NEKCDVAAC 109 (256)
T ss_dssp ESCCTTCCC----------SSCEEEEEE
T ss_pred ECChHhCCc----------CCCCCEEEE
Confidence 888765420 136888876
No 105
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=97.03 E-value=0.0021 Score=60.61 Aligned_cols=86 Identities=8% Similarity=0.064 Sum_probs=68.0
Q ss_pred chHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCc
Q 012954 120 MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNF 199 (452)
Q Consensus 120 Ll~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF 199 (452)
+++.+++.+. ..++..++|.-.|.|+.+..+++..+. .|+|+|.++.+++.|++++...+. ..++.+++.++
T Consensus 52 ~~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~~--~v~gvd~s~~~~~~a~~~~~~~~~-----~~~~~~~~~d~ 123 (287)
T 1kpg_A 52 KIDLALGKLG-LQPGMTLLDVGCGWGATMMRAVEKYDV--NVVGLTLSKNQANHVQQLVANSEN-----LRSKRVLLAGW 123 (287)
T ss_dssp HHHHHHTTTT-CCTTCEEEEETCTTSHHHHHHHHHHCC--EEEEEESCHHHHHHHHHHHHTCCC-----CSCEEEEESCG
T ss_pred HHHHHHHHcC-CCCcCEEEEECCcccHHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcCC-----CCCeEEEECCh
Confidence 5677788876 468889999999999999999977653 699999999999999998876543 23688888887
Q ss_pred chHHHHHhhhcccccccCccEEEEcc
Q 012954 200 RHIKSVLGQIDENILRSGVDAILMDL 225 (452)
Q Consensus 200 ~~i~~~L~~~~~~l~~~~VDGILfDL 225 (452)
..+. ..+|.|+...
T Consensus 124 ~~~~------------~~fD~v~~~~ 137 (287)
T 1kpg_A 124 EQFD------------EPVDRIVSIG 137 (287)
T ss_dssp GGCC------------CCCSEEEEES
T ss_pred hhCC------------CCeeEEEEeC
Confidence 5431 3689888754
No 106
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=97.03 E-value=0.0034 Score=57.49 Aligned_cols=91 Identities=9% Similarity=0.008 Sum_probs=68.0
Q ss_pred ccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEcc
Q 012954 118 PVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAK 197 (452)
Q Consensus 118 PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~ 197 (452)
|-....+++.+. ..++..++|.-.|.|..+..+++. ..+++++|+++++++.|+++++.++. ..++.+++.
T Consensus 77 ~~~~~~~~~~~~-~~~~~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~-----~~~~~~~~~ 147 (248)
T 2yvl_A 77 PKDSFYIALKLN-LNKEKRVLEFGTGSGALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKKFNL-----GKNVKFFNV 147 (248)
T ss_dssp HHHHHHHHHHTT-CCTTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHHTTC-----CTTEEEECS
T ss_pred chhHHHHHHhcC-CCCCCEEEEeCCCccHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCC-----CCcEEEEEc
Confidence 445556677775 468899999999999999999987 35799999999999999998876543 136788888
Q ss_pred CcchHHHHHhhhcccccccCccEEEEccC
Q 012954 198 NFRHIKSVLGQIDENILRSGVDAILMDLG 226 (452)
Q Consensus 198 nF~~i~~~L~~~~~~l~~~~VDGILfDLG 226 (452)
++.+. +. ....+|.|+.|.+
T Consensus 148 d~~~~---~~------~~~~~D~v~~~~~ 167 (248)
T 2yvl_A 148 DFKDA---EV------PEGIFHAAFVDVR 167 (248)
T ss_dssp CTTTS---CC------CTTCBSEEEECSS
T ss_pred Chhhc---cc------CCCcccEEEECCc
Confidence 77542 10 1136999998543
No 107
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=97.02 E-value=0.001 Score=66.78 Aligned_cols=93 Identities=13% Similarity=0.043 Sum_probs=70.1
Q ss_pred ccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEcc
Q 012954 118 PVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAK 197 (452)
Q Consensus 118 PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~ 197 (452)
+.|...++... ..++..++|..+|.|+.+..++...+. +.|+|+|+|+.+++.|+++++..+. ..+++++++
T Consensus 204 ~~la~~l~~~~--~~~~~~vLD~gCGsG~~~i~~a~~~~~-~~v~g~Dis~~~l~~A~~n~~~~gl-----~~~i~~~~~ 275 (373)
T 3tm4_A 204 ASIANAMIELA--ELDGGSVLDPMCGSGTILIELALRRYS-GEIIGIEKYRKHLIGAEMNALAAGV-----LDKIKFIQG 275 (373)
T ss_dssp HHHHHHHHHHH--TCCSCCEEETTCTTCHHHHHHHHTTCC-SCEEEEESCHHHHHHHHHHHHHTTC-----GGGCEEEEC
T ss_pred HHHHHHHHHhh--cCCCCEEEEccCcCcHHHHHHHHhCCC-CeEEEEeCCHHHHHHHHHHHHHcCC-----CCceEEEEC
Confidence 33444555554 357889999999999999988876553 4699999999999999999877643 236888999
Q ss_pred CcchHHHHHhhhcccccccCccEEEEccCC
Q 012954 198 NFRHIKSVLGQIDENILRSGVDAILMDLGM 227 (452)
Q Consensus 198 nF~~i~~~L~~~~~~l~~~~VDGILfDLGv 227 (452)
++.++. . ....+|.|+.|.=|
T Consensus 276 D~~~~~----~-----~~~~fD~Ii~npPy 296 (373)
T 3tm4_A 276 DATQLS----Q-----YVDSVDFAISNLPY 296 (373)
T ss_dssp CGGGGG----G-----TCSCEEEEEEECCC
T ss_pred ChhhCC----c-----ccCCcCEEEECCCC
Confidence 988753 1 12369999998754
No 108
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=97.01 E-value=0.0022 Score=64.58 Aligned_cols=90 Identities=14% Similarity=0.089 Sum_probs=65.2
Q ss_pred HHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcch
Q 012954 122 GEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRH 201 (452)
Q Consensus 122 ~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~ 201 (452)
...+..+. +++..++|+..|.|+.+..+++. + .+.|+|+|+++.|++.|+++++..+. ..++++++++..+
T Consensus 208 ~~~~~~~~--~~~~~VLDl~~G~G~~~~~la~~-g-~~~v~~vD~s~~~l~~a~~n~~~n~~-----~~~v~~~~~d~~~ 278 (396)
T 2as0_A 208 RLALEKWV--QPGDRVLDVFTYTGGFAIHAAIA-G-ADEVIGIDKSPRAIETAKENAKLNGV-----EDRMKFIVGSAFE 278 (396)
T ss_dssp HHHHGGGC--CTTCEEEETTCTTTHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHTTC-----GGGEEEEESCHHH
T ss_pred HHHHHHHh--hCCCeEEEecCCCCHHHHHHHHC-C-CCEEEEEeCCHHHHHHHHHHHHHcCC-----CccceEEECCHHH
Confidence 34444442 37789999999999999999876 3 35799999999999999998876532 1268889888665
Q ss_pred HHHHHhhhcccccccCccEEEEcc
Q 012954 202 IKSVLGQIDENILRSGVDAILMDL 225 (452)
Q Consensus 202 i~~~L~~~~~~l~~~~VDGILfDL 225 (452)
+...+... ...+|.|++|.
T Consensus 279 ~~~~~~~~-----~~~fD~Vi~dp 297 (396)
T 2as0_A 279 EMEKLQKK-----GEKFDIVVLDP 297 (396)
T ss_dssp HHHHHHHT-----TCCEEEEEECC
T ss_pred HHHHHHhh-----CCCCCEEEECC
Confidence 43332211 13699999853
No 109
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=97.00 E-value=0.0015 Score=60.16 Aligned_cols=81 Identities=11% Similarity=0.011 Sum_probs=59.4
Q ss_pred CCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhc
Q 012954 131 SRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQID 210 (452)
Q Consensus 131 ~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~ 210 (452)
..++..++|.-.|.|+.+..+++.+++.++|+|+|.++.+++.+.+..+.. .+++++++++.+... +...
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~--------~~v~~~~~d~~~~~~-~~~~- 144 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR--------TNIIPVIEDARHPHK-YRML- 144 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC--------TTEEEECSCTTCGGG-GGGG-
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc--------CCeEEEEcccCChhh-hccc-
Confidence 357889999999999999999998754468999999999877766544332 267888888876321 1111
Q ss_pred ccccccCccEEEEcc
Q 012954 211 ENILRSGVDAILMDL 225 (452)
Q Consensus 211 ~~l~~~~VDGILfDL 225 (452)
...+|.|+.|+
T Consensus 145 ----~~~~D~V~~~~ 155 (233)
T 2ipx_A 145 ----IAMVDVIFADV 155 (233)
T ss_dssp ----CCCEEEEEECC
T ss_pred ----CCcEEEEEEcC
Confidence 23699999864
No 110
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=96.99 E-value=0.0015 Score=59.08 Aligned_cols=96 Identities=22% Similarity=0.203 Sum_probs=67.2
Q ss_pred cccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEc
Q 012954 117 IPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196 (452)
Q Consensus 117 ~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~ 196 (452)
.|..++.+++.+. ..++..++|.-.|.|..+..+++..+. ..++|+|+++.+++.|++++...+... ....++.+++
T Consensus 14 ~~~~~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~-~~~~~v~~~~ 90 (219)
T 3jwg_A 14 NQQRLGTVVAVLK-SVNAKKVIDLGCGEGNLLSLLLKDKSF-EQITGVDVSYSVLERAKDRLKIDRLPE-MQRKRISLFQ 90 (219)
T ss_dssp HHHHHHHHHHHHH-HTTCCEEEEETCTTCHHHHHHHTSTTC-CEEEEEESCHHHHHHHHHHHTGGGSCH-HHHTTEEEEE
T ss_pred hHHHHHHHHHHHh-hcCCCEEEEecCCCCHHHHHHHhcCCC-CEEEEEECCHHHHHHHHHHHHhhcccc-ccCcceEEEe
Confidence 3445677777776 347789999999999999998887665 479999999999999999876543200 0001577888
Q ss_pred cCcchHHHHHhhhcccccccCccEEEEc
Q 012954 197 KNFRHIKSVLGQIDENILRSGVDAILMD 224 (452)
Q Consensus 197 ~nF~~i~~~L~~~~~~l~~~~VDGILfD 224 (452)
++...+. . ....+|.|+..
T Consensus 91 ~d~~~~~----~-----~~~~fD~V~~~ 109 (219)
T 3jwg_A 91 SSLVYRD----K-----RFSGYDAATVI 109 (219)
T ss_dssp CCSSSCC----G-----GGTTCSEEEEE
T ss_pred Ccccccc----c-----ccCCCCEEEEH
Confidence 7764321 1 12368888863
No 111
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=96.99 E-value=0.0011 Score=62.51 Aligned_cols=56 Identities=20% Similarity=0.224 Sum_probs=45.5
Q ss_pred chHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHH
Q 012954 120 MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAH 177 (452)
Q Consensus 120 Ll~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~r 177 (452)
-+.++++.+....++..++|.-+|.|+.+..+++. +. .+|+|+|+++.+++.|+++
T Consensus 24 kL~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~-g~-~~V~gvDis~~ml~~a~~~ 79 (232)
T 3opn_A 24 KLEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQN-GA-KLVYALDVGTNQLAWKIRS 79 (232)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHT-TC-SEEEEECSSCCCCCHHHHT
T ss_pred HHHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhc-CC-CEEEEEcCCHHHHHHHHHh
Confidence 36788888864335669999999999999999987 32 3799999999999987653
No 112
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=96.99 E-value=0.0033 Score=63.36 Aligned_cols=83 Identities=16% Similarity=0.143 Sum_probs=61.7
Q ss_pred CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhccc
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDEN 212 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~ 212 (452)
++..++|+-.|.|+-+..+++.. .+.|+|+|+++.|++.|+++++..+.. ..++++++++..++...+...
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g--~~~V~~vD~s~~al~~a~~n~~~ngl~----~~~v~~~~~D~~~~~~~~~~~--- 290 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGG--CSQVVSVDTSQEALDIARQNVELNKLD----LSKAEFVRDDVFKLLRTYRDR--- 290 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTCC----GGGEEEEESCHHHHHHHHHHT---
T ss_pred CCCeEEEeeccCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCC----ccceEEEECCHHHHHHHHHhc---
Confidence 67899999999999999998752 357999999999999999988754320 126888888876543322211
Q ss_pred ccccCccEEEEccC
Q 012954 213 ILRSGVDAILMDLG 226 (452)
Q Consensus 213 l~~~~VDGILfDLG 226 (452)
...+|.|++|.-
T Consensus 291 --~~~fD~Ii~dpP 302 (396)
T 3c0k_A 291 --GEKFDVIVMDPP 302 (396)
T ss_dssp --TCCEEEEEECCS
T ss_pred --CCCCCEEEECCC
Confidence 136999999853
No 113
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=96.98 E-value=0.002 Score=60.90 Aligned_cols=79 Identities=6% Similarity=0.098 Sum_probs=65.7
Q ss_pred CCCCccccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCce
Q 012954 112 QQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLK 191 (452)
Q Consensus 112 ~~~~H~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r 191 (452)
.++-+-+-+++.+++.+. ..++..++|.-.|.|..|..+++.. ++|+|+|+|+.+++.++++++.. .+
T Consensus 10 Q~fl~d~~~~~~i~~~~~-~~~~~~VLDiG~G~G~lt~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~--------~~ 77 (244)
T 1qam_A 10 QNFITSKHNIDKIMTNIR-LNEHDNIFEIGSGKGHFTLELVQRC---NFVTAIEIDHKLCKTTENKLVDH--------DN 77 (244)
T ss_dssp CCBCCCHHHHHHHHTTCC-CCTTCEEEEECCTTSHHHHHHHHHS---SEEEEECSCHHHHHHHHHHTTTC--------CS
T ss_pred ccccCCHHHHHHHHHhCC-CCCCCEEEEEeCCchHHHHHHHHcC---CeEEEEECCHHHHHHHHHhhccC--------CC
Confidence 356677788999999997 4688899999999999999999885 57999999999999999877542 26
Q ss_pred EEEEccCcchH
Q 012954 192 THTFAKNFRHI 202 (452)
Q Consensus 192 ~~li~~nF~~i 202 (452)
++++++++..+
T Consensus 78 v~~~~~D~~~~ 88 (244)
T 1qam_A 78 FQVLNKDILQF 88 (244)
T ss_dssp EEEECCCGGGC
T ss_pred eEEEEChHHhC
Confidence 88888887653
No 114
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=96.97 E-value=0.0015 Score=59.03 Aligned_cols=96 Identities=15% Similarity=0.124 Sum_probs=67.4
Q ss_pred cccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEc
Q 012954 117 IPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196 (452)
Q Consensus 117 ~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~ 196 (452)
.|..++.+++.+. ..++..++|.-+|.|..+..+++..+. ..|+|+|+++.+++.|++++...+... ....++.+++
T Consensus 14 ~~~~~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~-~~~~~v~~~~ 90 (217)
T 3jwh_A 14 NQQRMNGVVAALK-QSNARRVIDLGCGQGNLLKILLKDSFF-EQITGVDVSYRSLEIAQERLDRLRLPR-NQWERLQLIQ 90 (217)
T ss_dssp HHHHHHHHHHHHH-HTTCCEEEEETCTTCHHHHHHHHCTTC-SEEEEEESCHHHHHHHHHHHTTCCCCH-HHHTTEEEEE
T ss_pred HHHHHHHHHHHHH-hcCCCEEEEeCCCCCHHHHHHHhhCCC-CEEEEEECCHHHHHHHHHHHHHhcCCc-ccCcceEEEe
Confidence 3456677777776 357889999999999999998876654 479999999999999999876432100 0001578888
Q ss_pred cCcchHHHHHhhhcccccccCccEEEEc
Q 012954 197 KNFRHIKSVLGQIDENILRSGVDAILMD 224 (452)
Q Consensus 197 ~nF~~i~~~L~~~~~~l~~~~VDGILfD 224 (452)
++...+. . ....+|.|+..
T Consensus 91 ~d~~~~~----~-----~~~~fD~v~~~ 109 (217)
T 3jwh_A 91 GALTYQD----K-----RFHGYDAATVI 109 (217)
T ss_dssp CCTTSCC----G-----GGCSCSEEEEE
T ss_pred CCccccc----c-----cCCCcCEEeeH
Confidence 8764321 1 12468988864
No 115
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=96.96 E-value=0.0035 Score=62.80 Aligned_cols=75 Identities=15% Similarity=0.139 Sum_probs=60.0
Q ss_pred ccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEcc
Q 012954 118 PVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAK 197 (452)
Q Consensus 118 PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~ 197 (452)
..|++.+++.+. . .++.++|+..|.|+.+..+.+.. .+|+|+|+++.|++.|+++++..+. .+++++++
T Consensus 200 ~~l~~~~~~~~~-~-~~~~vLDl~cG~G~~~l~la~~~---~~V~gvd~~~~ai~~a~~n~~~ng~------~~v~~~~~ 268 (369)
T 3bt7_A 200 IQMLEWALDVTK-G-SKGDLLELYCGNGNFSLALARNF---DRVLATEIAKPSVAAAQYNIAANHI------DNVQIIRM 268 (369)
T ss_dssp HHHHHHHHHHTT-T-CCSEEEEESCTTSHHHHHHGGGS---SEEEEECCCHHHHHHHHHHHHHTTC------CSEEEECC
T ss_pred HHHHHHHHHHhh-c-CCCEEEEccCCCCHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHHHcCC------CceEEEEC
Confidence 468888899886 3 36789999999999999776532 4799999999999999998876542 26888998
Q ss_pred CcchHH
Q 012954 198 NFRHIK 203 (452)
Q Consensus 198 nF~~i~ 203 (452)
+..++.
T Consensus 269 d~~~~~ 274 (369)
T 3bt7_A 269 AAEEFT 274 (369)
T ss_dssp CSHHHH
T ss_pred CHHHHH
Confidence 876654
No 116
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=96.96 E-value=0.0024 Score=64.13 Aligned_cols=85 Identities=14% Similarity=0.058 Sum_probs=62.9
Q ss_pred HhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHH
Q 012954 125 LDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKS 204 (452)
Q Consensus 125 l~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~ 204 (452)
...+... ++..++|+..|.|+.+..+++. ...|+|+|+++.|++.|+++++..+. .++++++++..++..
T Consensus 202 ~~~~~~~-~~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~~------~~~~~~~~d~~~~~~ 271 (382)
T 1wxx_A 202 RLYMERF-RGERALDVFSYAGGFALHLALG---FREVVAVDSSAEALRRAEENARLNGL------GNVRVLEANAFDLLR 271 (382)
T ss_dssp HHHGGGC-CEEEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTTC------TTEEEEESCHHHHHH
T ss_pred HHHHHhc-CCCeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCC------CCceEEECCHHHHHH
Confidence 3344433 6779999999999999999987 35799999999999999998876543 247888888765433
Q ss_pred HHhhhcccccccCccEEEEc
Q 012954 205 VLGQIDENILRSGVDAILMD 224 (452)
Q Consensus 205 ~L~~~~~~l~~~~VDGILfD 224 (452)
.+... ...+|.|++|
T Consensus 272 ~~~~~-----~~~fD~Ii~d 286 (382)
T 1wxx_A 272 RLEKE-----GERFDLVVLD 286 (382)
T ss_dssp HHHHT-----TCCEEEEEEC
T ss_pred HHHhc-----CCCeeEEEEC
Confidence 32211 1369999974
No 117
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=96.95 E-value=0.0029 Score=58.25 Aligned_cols=84 Identities=17% Similarity=0.189 Sum_probs=62.6
Q ss_pred chHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCc
Q 012954 120 MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNF 199 (452)
Q Consensus 120 Ll~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF 199 (452)
++.+++..+. ..++..++|.-+|.|.++..+++. ...|+|+|.++.+++.|++++...+. ++.+++.++
T Consensus 29 ~~~~~~~~~~-~~~~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~-------~v~~~~~d~ 97 (252)
T 1wzn_A 29 FVEEIFKEDA-KREVRRVLDLACGTGIPTLELAER---GYEVVGLDLHEEMLRVARRKAKERNL-------KIEFLQGDV 97 (252)
T ss_dssp HHHHHHHHTC-SSCCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC-------CCEEEESCG
T ss_pred HHHHHHHHhc-ccCCCEEEEeCCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhcCC-------ceEEEECCh
Confidence 3556666654 346789999999999999998876 24699999999999999998866432 577788877
Q ss_pred chHHHHHhhhcccccccCccEEEEc
Q 012954 200 RHIKSVLGQIDENILRSGVDAILMD 224 (452)
Q Consensus 200 ~~i~~~L~~~~~~l~~~~VDGILfD 224 (452)
..+. . ...+|.|++.
T Consensus 98 ~~~~-----~-----~~~fD~v~~~ 112 (252)
T 1wzn_A 98 LEIA-----F-----KNEFDAVTMF 112 (252)
T ss_dssp GGCC-----C-----CSCEEEEEEC
T ss_pred hhcc-----c-----CCCccEEEEc
Confidence 6531 1 1358888863
No 118
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=96.93 E-value=0.0058 Score=63.55 Aligned_cols=97 Identities=14% Similarity=0.144 Sum_probs=69.4
Q ss_pred ccccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHH-------HHHHhhhccCCCCC
Q 012954 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKA-------RAHLNSLLHGQAHP 188 (452)
Q Consensus 116 H~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~A-------k~rL~~~~~~~~~~ 188 (452)
-.|-++.++++.+. ..++..++|..+|.|..+..+++..+. .+|+|+|+++.+++.| +++++.++..
T Consensus 226 t~p~~v~~ml~~l~-l~~g~~VLDLGCGsG~la~~LA~~~g~-~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~---- 299 (433)
T 1u2z_A 226 LLPNFLSDVYQQCQ-LKKGDTFMDLGSGVGNCVVQAALECGC-ALSFGCEIMDDASDLTILQYEELKKRCKLYGMR---- 299 (433)
T ss_dssp BCHHHHHHHHHHTT-CCTTCEEEEESCTTSHHHHHHHHHHCC-SEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBC----
T ss_pred ccHHHHHHHHHhcC-CCCCCEEEEeCCCcCHHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCC----
Confidence 34778899999886 568899999999999999998887765 4799999999999999 7776665410
Q ss_pred CceEEEEcc-CcchHHHHHhhhcccccccCccEEEEc
Q 012954 189 HLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMD 224 (452)
Q Consensus 189 ~~r~~li~~-nF~~i~~~L~~~~~~l~~~~VDGILfD 224 (452)
..+++++++ .+..-.. +... ...+|.|+++
T Consensus 300 ~~nV~~i~gD~~~~~~~-~~~~-----~~~FDvIvvn 330 (433)
T 1u2z_A 300 LNNVEFSLKKSFVDNNR-VAEL-----IPQCDVILVN 330 (433)
T ss_dssp CCCEEEEESSCSTTCHH-HHHH-----GGGCSEEEEC
T ss_pred CCceEEEEcCccccccc-cccc-----cCCCCEEEEe
Confidence 136888774 5543111 1110 1258999863
No 119
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=96.91 E-value=0.0021 Score=61.94 Aligned_cols=87 Identities=14% Similarity=0.088 Sum_probs=67.0
Q ss_pred HHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcch
Q 012954 122 GEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRH 201 (452)
Q Consensus 122 ~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~ 201 (452)
+.+++.|....++..++|.-.|.|+.+..+++.++ ..|+|+|+++.+++.|+++++..+. ..++.++++++.+
T Consensus 106 ~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~ 178 (312)
T 3vc1_A 106 EFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFG--SRVEGVTLSAAQADFGNRRARELRI-----DDHVRSRVCNMLD 178 (312)
T ss_dssp HHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEECCTTS
T ss_pred HHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHHHHcCC-----CCceEEEECChhc
Confidence 44777775345788999999999999999998763 4699999999999999998877643 2368888888865
Q ss_pred HHHHHhhhcccccccCccEEEEc
Q 012954 202 IKSVLGQIDENILRSGVDAILMD 224 (452)
Q Consensus 202 i~~~L~~~~~~l~~~~VDGILfD 224 (452)
+. + ....+|.|+..
T Consensus 179 ~~--~-------~~~~fD~V~~~ 192 (312)
T 3vc1_A 179 TP--F-------DKGAVTASWNN 192 (312)
T ss_dssp CC--C-------CTTCEEEEEEE
T ss_pred CC--C-------CCCCEeEEEEC
Confidence 42 1 12469988853
No 120
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=96.91 E-value=0.003 Score=60.70 Aligned_cols=86 Identities=14% Similarity=0.135 Sum_probs=68.1
Q ss_pred chHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCc
Q 012954 120 MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNF 199 (452)
Q Consensus 120 Ll~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF 199 (452)
+++.+++.+. ..++..++|.-.|.|+.+..+++.++ ..|+|+|+++.+++.|++++...+. ..++.+++.++
T Consensus 78 ~~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~ 149 (318)
T 2fk8_A 78 KVDLNLDKLD-LKPGMTLLDIGCGWGTTMRRAVERFD--VNVIGLTLSKNQHARCEQVLASIDT-----NRSRQVLLQGW 149 (318)
T ss_dssp HHHHHHTTSC-CCTTCEEEEESCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHTSCC-----SSCEEEEESCG
T ss_pred HHHHHHHhcC-CCCcCEEEEEcccchHHHHHHHHHCC--CEEEEEECCHHHHHHHHHHHHhcCC-----CCceEEEECCh
Confidence 4567788776 46888999999999999999998763 3799999999999999998876543 23688888887
Q ss_pred chHHHHHhhhcccccccCccEEEEcc
Q 012954 200 RHIKSVLGQIDENILRSGVDAILMDL 225 (452)
Q Consensus 200 ~~i~~~L~~~~~~l~~~~VDGILfDL 225 (452)
.+++ ..+|.|+...
T Consensus 150 ~~~~------------~~fD~v~~~~ 163 (318)
T 2fk8_A 150 EDFA------------EPVDRIVSIE 163 (318)
T ss_dssp GGCC------------CCCSEEEEES
T ss_pred HHCC------------CCcCEEEEeC
Confidence 6531 3699888764
No 121
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=96.90 E-value=0.0017 Score=62.06 Aligned_cols=96 Identities=14% Similarity=0.111 Sum_probs=65.6
Q ss_pred ccccchHHHHhhcc--CCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEE
Q 012954 116 HIPVMLGEVLDVFS--SSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTH 193 (452)
Q Consensus 116 H~PVLl~Evl~~L~--~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~ 193 (452)
+.+-+-..++..|. ..+++..++|...|.|+.|..+.+..++.|+|+|+|.++.+++...+..+.. .++.
T Consensus 57 ~~skla~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r--------~nv~ 128 (232)
T 3id6_C 57 FRSKLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR--------PNIF 128 (232)
T ss_dssp TTCHHHHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC--------TTEE
T ss_pred HHHHHHHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc--------CCeE
Confidence 45555666666653 1468999999999999999999988777789999999998764332222111 2577
Q ss_pred EEccCcchHHHHHhhhcccccccCccEEEEcc
Q 012954 194 TFAKNFRHIKSVLGQIDENILRSGVDAILMDL 225 (452)
Q Consensus 194 li~~nF~~i~~~L~~~~~~l~~~~VDGILfDL 225 (452)
+++++..+...+. .. ...+|.|+.|+
T Consensus 129 ~i~~Da~~~~~~~-~~-----~~~~D~I~~d~ 154 (232)
T 3id6_C 129 PLLADARFPQSYK-SV-----VENVDVLYVDI 154 (232)
T ss_dssp EEECCTTCGGGTT-TT-----CCCEEEEEECC
T ss_pred EEEcccccchhhh-cc-----ccceEEEEecC
Confidence 7777765432111 11 23699999884
No 122
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=96.88 E-value=0.0037 Score=58.27 Aligned_cols=90 Identities=11% Similarity=0.096 Sum_probs=69.2
Q ss_pred cchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccC
Q 012954 119 VMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKN 198 (452)
Q Consensus 119 VLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~n 198 (452)
-+++.+++.+. ..++..++|.-.|.|..+..+++..+ ..|+|+|.++.+++.|++++...+. ..++.+++.+
T Consensus 48 ~~~~~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~~~~~~~d 119 (273)
T 3bus_A 48 RLTDEMIALLD-VRSGDRVLDVGCGIGKPAVRLATARD--VRVTGISISRPQVNQANARATAAGL-----ANRVTFSYAD 119 (273)
T ss_dssp HHHHHHHHHSC-CCTTCEEEEESCTTSHHHHHHHHHSC--CEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEECC
T ss_pred HHHHHHHHhcC-CCCCCEEEEeCCCCCHHHHHHHHhcC--CEEEEEeCCHHHHHHHHHHHHhcCC-----CcceEEEECc
Confidence 35677888886 46889999999999999999988763 4799999999999999998876543 2368888888
Q ss_pred cchHHHHHhhhcccccccCccEEEEcc
Q 012954 199 FRHIKSVLGQIDENILRSGVDAILMDL 225 (452)
Q Consensus 199 F~~i~~~L~~~~~~l~~~~VDGILfDL 225 (452)
+.++. . ....+|.|+...
T Consensus 120 ~~~~~-----~----~~~~fD~v~~~~ 137 (273)
T 3bus_A 120 AMDLP-----F----EDASFDAVWALE 137 (273)
T ss_dssp TTSCC-----S----CTTCEEEEEEES
T ss_pred cccCC-----C----CCCCccEEEEec
Confidence 76532 1 124689888643
No 123
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=96.83 E-value=0.0024 Score=58.89 Aligned_cols=85 Identities=15% Similarity=0.157 Sum_probs=62.0
Q ss_pred HHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcch
Q 012954 122 GEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRH 201 (452)
Q Consensus 122 ~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~ 201 (452)
..+.+.+ ..++..++|.-+|.|..+..+.+. +. ..|+|+|.++.+++.|+++.+..+ .++.+++++..+
T Consensus 51 ~~l~~~~--~~~~~~vLDiGcGtG~~~~~l~~~-~~-~~v~gvD~s~~~l~~a~~~~~~~~-------~~v~~~~~d~~~ 119 (236)
T 1zx0_A 51 HALAAAA--SSKGGRVLEVGFGMAIAASKVQEA-PI-DEHWIIECNDGVFQRLRDWAPRQT-------HKVIPLKGLWED 119 (236)
T ss_dssp HHHHHHH--TTTCEEEEEECCTTSHHHHHHHTS-CE-EEEEEEECCHHHHHHHHHHGGGCS-------SEEEEEESCHHH
T ss_pred HHHHhhc--CCCCCeEEEEeccCCHHHHHHHhc-CC-CeEEEEcCCHHHHHHHHHHHHhcC-------CCeEEEecCHHH
Confidence 3444444 247889999999999888888543 33 369999999999999999776542 378888888876
Q ss_pred HHHHHhhhcccccccCccEEEEc
Q 012954 202 IKSVLGQIDENILRSGVDAILMD 224 (452)
Q Consensus 202 i~~~L~~~~~~l~~~~VDGILfD 224 (452)
+. ... ....+|.|+.|
T Consensus 120 ~~---~~~----~~~~fD~V~~d 135 (236)
T 1zx0_A 120 VA---PTL----PDGHFDGILYD 135 (236)
T ss_dssp HG---GGS----CTTCEEEEEEC
T ss_pred hh---ccc----CCCceEEEEEC
Confidence 42 211 12469999986
No 124
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=96.82 E-value=0.0048 Score=57.72 Aligned_cols=90 Identities=16% Similarity=0.206 Sum_probs=67.1
Q ss_pred hHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcc
Q 012954 121 LGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFR 200 (452)
Q Consensus 121 l~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~ 200 (452)
+.+.+.......++..++|.-.|.|..+..+++..|. ..++|+|.++.+++.|++++...+. .++.++..+..
T Consensus 25 l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~------~~~~~~~~d~~ 97 (276)
T 3mgg_A 25 LEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPD-AEITSIDISPESLEKARENTEKNGI------KNVKFLQANIF 97 (276)
T ss_dssp HHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTT-SEEEEEESCHHHHHHHHHHHHHTTC------CSEEEEECCGG
T ss_pred HHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCC-CEEEEEECCHHHHHHHHHHHHHcCC------CCcEEEEcccc
Confidence 4444444433457889999999999999999988766 5799999999999999998876543 25778887776
Q ss_pred hHHHHHhhhcccccccCccEEEEccC
Q 012954 201 HIKSVLGQIDENILRSGVDAILMDLG 226 (452)
Q Consensus 201 ~i~~~L~~~~~~l~~~~VDGILfDLG 226 (452)
.+. + ....+|.|+....
T Consensus 98 ~~~--~-------~~~~fD~v~~~~~ 114 (276)
T 3mgg_A 98 SLP--F-------EDSSFDHIFVCFV 114 (276)
T ss_dssp GCC--S-------CTTCEEEEEEESC
T ss_pred cCC--C-------CCCCeeEEEEech
Confidence 532 1 1246898887653
No 125
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=96.80 E-value=0.0048 Score=56.86 Aligned_cols=79 Identities=13% Similarity=0.006 Sum_probs=55.7
Q ss_pred CCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhc
Q 012954 131 SRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQID 210 (452)
Q Consensus 131 ~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~ 210 (452)
.+++..++|.-+|.|..+..+.+..+ .+.|+|+|+++.+++.+.+..+.. .++.++.++..+...+..
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~~--------~~v~~~~~d~~~~~~~~~--- 122 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRER--------NNIIPLLFDASKPWKYSG--- 122 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHHC--------SSEEEECSCTTCGGGTTT---
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhcC--------CCeEEEEcCCCCchhhcc---
Confidence 35788999999999999998888887 578999999999876555433321 256677766554321111
Q ss_pred ccccccCccEEEEc
Q 012954 211 ENILRSGVDAILMD 224 (452)
Q Consensus 211 ~~l~~~~VDGILfD 224 (452)
+ ...+|.|+.|
T Consensus 123 --~-~~~fD~V~~~ 133 (210)
T 1nt2_A 123 --I-VEKVDLIYQD 133 (210)
T ss_dssp --T-CCCEEEEEEC
T ss_pred --c-ccceeEEEEe
Confidence 0 1469999987
No 126
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=96.79 E-value=0.0045 Score=57.47 Aligned_cols=95 Identities=13% Similarity=0.176 Sum_probs=69.6
Q ss_pred chHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCc
Q 012954 120 MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNF 199 (452)
Q Consensus 120 Ll~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF 199 (452)
-+..+++.+. ..++..++|.-+|.|..+..+++..+ .|+|+|.++.+++.|++++...+. .++.++.+++
T Consensus 25 ~~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~------~~v~~~~~d~ 94 (260)
T 1vl5_A 25 DLAKLMQIAA-LKGNEEVLDVATGGGHVANAFAPFVK---KVVAFDLTEDILKVARAFIEGNGH------QQVEYVQGDA 94 (260)
T ss_dssp CHHHHHHHHT-CCSCCEEEEETCTTCHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHTTC------CSEEEEECCC
T ss_pred HHHHHHHHhC-CCCCCEEEEEeCCCCHHHHHHHHhCC---EEEEEeCCHHHHHHHHHHHHhcCC------CceEEEEecH
Confidence 5677888886 46889999999999988887777653 699999999999999998876542 2577888887
Q ss_pred chHHHHHhhhcccccccCccEEEEccCCCccCCCCC
Q 012954 200 RHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235 (452)
Q Consensus 200 ~~i~~~L~~~~~~l~~~~VDGILfDLGvSS~QLDd~ 235 (452)
.++. . ....+|.|+.... .+++.++
T Consensus 95 ~~l~-----~----~~~~fD~V~~~~~--l~~~~d~ 119 (260)
T 1vl5_A 95 EQMP-----F----TDERFHIVTCRIA--AHHFPNP 119 (260)
T ss_dssp -CCC-----S----CTTCEEEEEEESC--GGGCSCH
T ss_pred HhCC-----C----CCCCEEEEEEhhh--hHhcCCH
Confidence 6532 1 1246999987754 3444444
No 127
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=96.77 E-value=0.002 Score=62.02 Aligned_cols=79 Identities=11% Similarity=0.165 Sum_probs=66.6
Q ss_pred CCCCccccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCce
Q 012954 112 QQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLK 191 (452)
Q Consensus 112 ~~~~H~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r 191 (452)
.++-+-|-+++.+++.+. ..++..++|.-.|.|..|..+++.. ++|+|+|+|+.+++.+++++... .+
T Consensus 9 QnFL~d~~i~~~iv~~~~-~~~~~~VLEIG~G~G~lt~~La~~~---~~V~avEid~~~~~~~~~~~~~~--------~~ 76 (255)
T 3tqs_A 9 QHFLHDSFVLQKIVSAIH-PQKTDTLVEIGPGRGALTDYLLTEC---DNLALVEIDRDLVAFLQKKYNQQ--------KN 76 (255)
T ss_dssp CCEECCHHHHHHHHHHHC-CCTTCEEEEECCTTTTTHHHHTTTS---SEEEEEECCHHHHHHHHHHHTTC--------TT
T ss_pred cccccCHHHHHHHHHhcC-CCCcCEEEEEcccccHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHhhC--------CC
Confidence 556677889999999997 5688999999999999999999863 57999999999999999887642 26
Q ss_pred EEEEccCcchH
Q 012954 192 THTFAKNFRHI 202 (452)
Q Consensus 192 ~~li~~nF~~i 202 (452)
++++++++..+
T Consensus 77 v~~i~~D~~~~ 87 (255)
T 3tqs_A 77 ITIYQNDALQF 87 (255)
T ss_dssp EEEEESCTTTC
T ss_pred cEEEEcchHhC
Confidence 88889888654
No 128
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=96.75 E-value=0.0051 Score=58.02 Aligned_cols=87 Identities=16% Similarity=0.123 Sum_probs=65.9
Q ss_pred hHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcc
Q 012954 121 LGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFR 200 (452)
Q Consensus 121 l~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~ 200 (452)
+.++++.+. . ++..++|.-.|.|..+..+++. ...|+|+|.++.+++.|++++...+. ..++.++++++.
T Consensus 58 l~~~l~~~~-~-~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~ 127 (285)
T 4htf_A 58 LDRVLAEMG-P-QKLRVLDAGGGEGQTAIKMAER---GHQVILCDLSAQMIDRAKQAAEAKGV-----SDNMQFIHCAAQ 127 (285)
T ss_dssp HHHHHHHTC-S-SCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC-CC-----GGGEEEEESCGG
T ss_pred HHHHHHhcC-C-CCCEEEEeCCcchHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCC-----CcceEEEEcCHH
Confidence 456666665 2 4679999999999999888876 24799999999999999998876543 247889999987
Q ss_pred hHHHHHhhhcccccccCccEEEEcc
Q 012954 201 HIKSVLGQIDENILRSGVDAILMDL 225 (452)
Q Consensus 201 ~i~~~L~~~~~~l~~~~VDGILfDL 225 (452)
.+.... ...+|.|+...
T Consensus 128 ~~~~~~--------~~~fD~v~~~~ 144 (285)
T 4htf_A 128 DVASHL--------ETPVDLILFHA 144 (285)
T ss_dssp GTGGGC--------SSCEEEEEEES
T ss_pred Hhhhhc--------CCCceEEEECc
Confidence 753221 24699999863
No 129
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=96.74 E-value=0.0044 Score=55.74 Aligned_cols=83 Identities=16% Similarity=0.153 Sum_probs=61.5
Q ss_pred chHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCc
Q 012954 120 MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNF 199 (452)
Q Consensus 120 Ll~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF 199 (452)
+++.+++.+. ++..++|.-.|.|..+..+++..+ .++|+|.++.+++.|++++...+ .++++++.++
T Consensus 28 ~~~~l~~~~~---~~~~vLDlG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~-------~~~~~~~~d~ 94 (227)
T 1ve3_A 28 LEPLLMKYMK---KRGKVLDLACGVGGFSFLLEDYGF---EVVGVDISEDMIRKAREYAKSRE-------SNVEFIVGDA 94 (227)
T ss_dssp HHHHHHHSCC---SCCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTT-------CCCEEEECCT
T ss_pred HHHHHHHhcC---CCCeEEEEeccCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcC-------CCceEEECch
Confidence 4455555553 478999999999999988887654 69999999999999999876543 2677788877
Q ss_pred chHHHHHhhhcccccccCccEEEEc
Q 012954 200 RHIKSVLGQIDENILRSGVDAILMD 224 (452)
Q Consensus 200 ~~i~~~L~~~~~~l~~~~VDGILfD 224 (452)
.++. . ....+|.|+.+
T Consensus 95 ~~~~-----~----~~~~~D~v~~~ 110 (227)
T 1ve3_A 95 RKLS-----F----EDKTFDYVIFI 110 (227)
T ss_dssp TSCC-----S----CTTCEEEEEEE
T ss_pred hcCC-----C----CCCcEEEEEEc
Confidence 6531 1 12368988876
No 130
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=96.72 E-value=0.0051 Score=54.04 Aligned_cols=84 Identities=15% Similarity=0.031 Sum_probs=63.4
Q ss_pred hHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcc
Q 012954 121 LGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFR 200 (452)
Q Consensus 121 l~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~ 200 (452)
..++++.+. ..+++.++|.-.|.|..+..+++. ...++|+|.++.+++.|++++...+. .++.+++.++.
T Consensus 21 ~~~l~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~------~~~~~~~~d~~ 90 (199)
T 2xvm_A 21 HSEVLEAVK-VVKPGKTLDLGCGNGRNSLYLAAN---GYDVDAWDKNAMSIANVERIKSIENL------DNLHTRVVDLN 90 (199)
T ss_dssp CHHHHHHTT-TSCSCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTC------TTEEEEECCGG
T ss_pred cHHHHHHhh-ccCCCeEEEEcCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhCCC------CCcEEEEcchh
Confidence 446677776 347789999999999999888876 24799999999999999998876532 25778888776
Q ss_pred hHHHHHhhhcccccccCccEEEEc
Q 012954 201 HIKSVLGQIDENILRSGVDAILMD 224 (452)
Q Consensus 201 ~i~~~L~~~~~~l~~~~VDGILfD 224 (452)
++. + ...+|.|+..
T Consensus 91 ~~~---------~-~~~~D~v~~~ 104 (199)
T 2xvm_A 91 NLT---------F-DRQYDFILST 104 (199)
T ss_dssp GCC---------C-CCCEEEEEEE
T ss_pred hCC---------C-CCCceEEEEc
Confidence 532 0 1368888855
No 131
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=96.72 E-value=0.0043 Score=58.76 Aligned_cols=88 Identities=11% Similarity=-0.016 Sum_probs=67.7
Q ss_pred chHHHHhhc----cCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEE
Q 012954 120 MLGEVLDVF----SSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTF 195 (452)
Q Consensus 120 Ll~Evl~~L----~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li 195 (452)
+++.+++.+ . ..++..++|.-+|.|..+..+++.++ ..|+|+|+++.+++.|++++...+. ..+++++
T Consensus 66 ~~~~l~~~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~~~~~ 137 (297)
T 2o57_A 66 TDEWLASELAMTGV-LQRQAKGLDLGAGYGGAARFLVRKFG--VSIDCLNIAPVQNKRNEEYNNQAGL-----ADNITVK 137 (297)
T ss_dssp HHHHHHHHHHHTTC-CCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHHHTC-----TTTEEEE
T ss_pred HHHHHHHHhhhccC-CCCCCEEEEeCCCCCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhcCC-----CcceEEE
Confidence 567788887 4 45788999999999999999998764 3699999999999999998876543 2368888
Q ss_pred ccCcchHHHHHhhhcccccccCccEEEEc
Q 012954 196 AKNFRHIKSVLGQIDENILRSGVDAILMD 224 (452)
Q Consensus 196 ~~nF~~i~~~L~~~~~~l~~~~VDGILfD 224 (452)
++++..+. . ....+|.|+..
T Consensus 138 ~~d~~~~~-----~----~~~~fD~v~~~ 157 (297)
T 2o57_A 138 YGSFLEIP-----C----EDNSYDFIWSQ 157 (297)
T ss_dssp ECCTTSCS-----S----CTTCEEEEEEE
T ss_pred EcCcccCC-----C----CCCCEeEEEec
Confidence 88876542 1 12368888865
No 132
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=96.72 E-value=0.0021 Score=62.59 Aligned_cols=94 Identities=11% Similarity=0.040 Sum_probs=73.5
Q ss_pred CCCCccccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCce
Q 012954 112 QQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLK 191 (452)
Q Consensus 112 ~~~~H~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r 191 (452)
.++-+-|-+++.+++.+. ..++ .++|.-.|.|..|..+++.. ++|+|+|+|+.+++.+++++.. .+
T Consensus 27 QnfL~d~~i~~~Iv~~~~-~~~~-~VLEIG~G~G~lt~~L~~~~---~~V~avEid~~~~~~l~~~~~~---------~~ 92 (271)
T 3fut_A 27 QNFLVSEAHLRRIVEAAR-PFTG-PVFEVGPGLGALTRALLEAG---AEVTAIEKDLRLRPVLEETLSG---------LP 92 (271)
T ss_dssp CCEECCHHHHHHHHHHHC-CCCS-CEEEECCTTSHHHHHHHHTT---CCEEEEESCGGGHHHHHHHTTT---------SS
T ss_pred ccccCCHHHHHHHHHhcC-CCCC-eEEEEeCchHHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcCC---------CC
Confidence 556677889999999997 4678 99999999999999999874 4699999999999999987642 27
Q ss_pred EEEEccCcchHHHHHhhhcccccccCccEEEEccCC
Q 012954 192 THTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGM 227 (452)
Q Consensus 192 ~~li~~nF~~i~~~L~~~~~~l~~~~VDGILfDLGv 227 (452)
++++++++..++ +.+ ....|.|+.||=|
T Consensus 93 v~vi~~D~l~~~--~~~------~~~~~~iv~NlPy 120 (271)
T 3fut_A 93 VRLVFQDALLYP--WEE------VPQGSLLVANLPY 120 (271)
T ss_dssp EEEEESCGGGSC--GGG------SCTTEEEEEEECS
T ss_pred EEEEECChhhCC--hhh------ccCccEEEecCcc
Confidence 899999987642 111 0146778877755
No 133
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=96.71 E-value=0.0028 Score=59.14 Aligned_cols=101 Identities=10% Similarity=0.083 Sum_probs=72.0
Q ss_pred chHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHH------HHHHHHHHHhhhccCCCCCCceEE
Q 012954 120 MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPS------ALAKARAHLNSLLHGQAHPHLKTH 193 (452)
Q Consensus 120 Ll~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~------Ai~~Ak~rL~~~~~~~~~~~~r~~ 193 (452)
...++++.+. ..++..++|.-.|.|.++..+++.+++...|+|+|.++. +++.|++++...+. ..+++
T Consensus 31 ~~~~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~-----~~~v~ 104 (275)
T 3bkx_A 31 HRLAIAEAWQ-VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPL-----GDRLT 104 (275)
T ss_dssp HHHHHHHHHT-CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTT-----GGGEE
T ss_pred HHHHHHHHcC-CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCC-----CCceE
Confidence 3567777775 468899999999999999999998744457999999997 99999998876532 23788
Q ss_pred EEccC-cchHHHHHhhhcccccccCccEEEEccCCCccCCCCC
Q 012954 194 TFAKN-FRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNP 235 (452)
Q Consensus 194 li~~n-F~~i~~~L~~~~~~l~~~~VDGILfDLGvSS~QLDd~ 235 (452)
+++.+ +... .+. +....+|.|+....+ +++.++
T Consensus 105 ~~~~d~~~~~--~~~-----~~~~~fD~v~~~~~l--~~~~~~ 138 (275)
T 3bkx_A 105 VHFNTNLSDD--LGP-----IADQHFDRVVLAHSL--WYFASA 138 (275)
T ss_dssp EECSCCTTTC--CGG-----GTTCCCSEEEEESCG--GGSSCH
T ss_pred EEECChhhhc--cCC-----CCCCCEEEEEEccch--hhCCCH
Confidence 88887 3211 111 112469999976543 445443
No 134
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=96.68 E-value=0.0081 Score=59.74 Aligned_cols=81 Identities=14% Similarity=-0.072 Sum_probs=60.2
Q ss_pred CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhccc
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDEN 212 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~ 212 (452)
++..++|+-.|.|+.+..++.. + ..|+|+|+++.|++.|+++++..+.. ..++.+++++..++...+...
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~-g--a~V~~VD~s~~al~~a~~n~~~~gl~----~~~v~~i~~D~~~~l~~~~~~--- 222 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAA-G--AEVTHVDASKKAIGWAKENQVLAGLE----QAPIRWICEDAMKFIQREERR--- 222 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT-T--CEEEEECSCHHHHHHHHHHHHHHTCT----TSCEEEECSCHHHHHHHHHHH---
T ss_pred CCCcEEEcccccCHHHHHHHHc-C--CEEEEEECCHHHHHHHHHHHHHcCCC----ccceEEEECcHHHHHHHHHhc---
Confidence 5679999999999999999875 2 27999999999999999988765431 114888888865543222111
Q ss_pred ccccCccEEEEcc
Q 012954 213 ILRSGVDAILMDL 225 (452)
Q Consensus 213 l~~~~VDGILfDL 225 (452)
...+|.|++|.
T Consensus 223 --~~~fD~Ii~dP 233 (332)
T 2igt_A 223 --GSTYDIILTDP 233 (332)
T ss_dssp --TCCBSEEEECC
T ss_pred --CCCceEEEECC
Confidence 13699999984
No 135
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=96.67 E-value=0.003 Score=58.13 Aligned_cols=86 Identities=14% Similarity=0.084 Sum_probs=65.6
Q ss_pred cchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccC
Q 012954 119 VMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKN 198 (452)
Q Consensus 119 VLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~n 198 (452)
-++.++++.+. ..++..++|.-.|.|..+..+++.+ . ..|+|+|.++.+++.|++++... .++++++.+
T Consensus 42 ~~~~~~~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~-~-~~v~~vD~s~~~~~~a~~~~~~~--------~~~~~~~~d 110 (266)
T 3ujc_A 42 EATKKILSDIE-LNENSKVLDIGSGLGGGCMYINEKY-G-AHTHGIDICSNIVNMANERVSGN--------NKIIFEAND 110 (266)
T ss_dssp HHHHHHTTTCC-CCTTCEEEEETCTTSHHHHHHHHHH-C-CEEEEEESCHHHHHHHHHTCCSC--------TTEEEEECC
T ss_pred HHHHHHHHhcC-CCCCCEEEEECCCCCHHHHHHHHHc-C-CEEEEEeCCHHHHHHHHHHhhcC--------CCeEEEECc
Confidence 35678888886 4688899999999999999999887 2 47999999999999999876442 257777777
Q ss_pred cchHHHHHhhhcccccccCccEEEEc
Q 012954 199 FRHIKSVLGQIDENILRSGVDAILMD 224 (452)
Q Consensus 199 F~~i~~~L~~~~~~l~~~~VDGILfD 224 (452)
+.++. . ....+|.|+..
T Consensus 111 ~~~~~-----~----~~~~fD~v~~~ 127 (266)
T 3ujc_A 111 ILTKE-----F----PENNFDLIYSR 127 (266)
T ss_dssp TTTCC-----C----CTTCEEEEEEE
T ss_pred cccCC-----C----CCCcEEEEeHH
Confidence 76531 1 12468888865
No 136
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=96.66 E-value=0.0039 Score=62.46 Aligned_cols=78 Identities=14% Similarity=0.037 Sum_probs=59.4
Q ss_pred CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhccc
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDEN 212 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~ 212 (452)
++..++|.- |.|..+.++....+. ++|+|+|+|+.+++.|+++++.++. .+++++++++.+ .+...
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~-~~v~~vDi~~~~l~~a~~~~~~~g~------~~v~~~~~D~~~---~l~~~--- 237 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLP-KRIAVLDIDERLTKFIEKAANEIGY------EDIEIFTFDLRK---PLPDY--- 237 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCC-SEEEEECSCHHHHHHHHHHHHHHTC------CCEEEECCCTTS---CCCTT---
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCC-CEEEEEECCHHHHHHHHHHHHHcCC------CCEEEEEChhhh---hchhh---
Confidence 578999999 999988888766543 5799999999999999999887643 278899988765 11110
Q ss_pred ccccCccEEEEcc
Q 012954 213 ILRSGVDAILMDL 225 (452)
Q Consensus 213 l~~~~VDGILfDL 225 (452)
....+|.|++|.
T Consensus 238 -~~~~fD~Vi~~~ 249 (373)
T 2qm3_A 238 -ALHKFDTFITDP 249 (373)
T ss_dssp -TSSCBSEEEECC
T ss_pred -ccCCccEEEECC
Confidence 013699999874
No 137
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=96.61 E-value=0.0034 Score=61.30 Aligned_cols=80 Identities=9% Similarity=0.022 Sum_probs=65.6
Q ss_pred CCCCccccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCC-CCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCc
Q 012954 112 QQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPE-LKLHIGVDVDPSALAKARAHLNSLLHGQAHPHL 190 (452)
Q Consensus 112 ~~~~H~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~-~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~ 190 (452)
.++-+-|-+++.+++.+. ..++..++|.-.|.|..|..+++..+. .++|+|+|+|+.+++.++++. . .
T Consensus 22 Q~fL~d~~i~~~iv~~~~-~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~---~-------~ 90 (279)
T 3uzu_A 22 QNFLVDHGVIDAIVAAIR-PERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF---G-------E 90 (279)
T ss_dssp CCEECCHHHHHHHHHHHC-CCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH---G-------G
T ss_pred ccccCCHHHHHHHHHhcC-CCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc---C-------C
Confidence 455567778999999997 468899999999999999999998543 345999999999999998873 1 2
Q ss_pred eEEEEccCcchH
Q 012954 191 KTHTFAKNFRHI 202 (452)
Q Consensus 191 r~~li~~nF~~i 202 (452)
+++++++++..+
T Consensus 91 ~v~~i~~D~~~~ 102 (279)
T 3uzu_A 91 LLELHAGDALTF 102 (279)
T ss_dssp GEEEEESCGGGC
T ss_pred CcEEEECChhcC
Confidence 688899888654
No 138
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=96.55 E-value=0.0049 Score=58.18 Aligned_cols=85 Identities=13% Similarity=0.046 Sum_probs=65.5
Q ss_pred chHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCc
Q 012954 120 MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNF 199 (452)
Q Consensus 120 Ll~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF 199 (452)
...++++.+.. .+++.++|.-+|.|..+..+++. . ..|+|+|+++.+++.|++++...+. ++.+++.+.
T Consensus 108 ~~~~~~~~~~~-~~~~~vLD~GcG~G~~~~~l~~~--g-~~v~~vD~s~~~~~~a~~~~~~~~~-------~~~~~~~d~ 176 (286)
T 3m70_A 108 IHGDVVDAAKI-ISPCKVLDLGCGQGRNSLYLSLL--G-YDVTSWDHNENSIAFLNETKEKENL-------NISTALYDI 176 (286)
T ss_dssp CCHHHHHHHHH-SCSCEEEEESCTTCHHHHHHHHT--T-CEEEEEESCHHHHHHHHHHHHHTTC-------CEEEEECCG
T ss_pred hHHHHHHHhhc-cCCCcEEEECCCCCHHHHHHHHC--C-CeEEEEECCHHHHHHHHHHHHHcCC-------ceEEEEecc
Confidence 34566777753 37889999999999999998876 2 3699999999999999998876532 678888887
Q ss_pred chHHHHHhhhcccccccCccEEEEcc
Q 012954 200 RHIKSVLGQIDENILRSGVDAILMDL 225 (452)
Q Consensus 200 ~~i~~~L~~~~~~l~~~~VDGILfDL 225 (452)
..+.. ...+|.|+.+.
T Consensus 177 ~~~~~----------~~~fD~i~~~~ 192 (286)
T 3m70_A 177 NAANI----------QENYDFIVSTV 192 (286)
T ss_dssp GGCCC----------CSCEEEEEECS
T ss_pred ccccc----------cCCccEEEEcc
Confidence 65321 24699999865
No 139
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=96.54 E-value=0.0041 Score=57.27 Aligned_cols=76 Identities=14% Similarity=0.166 Sum_probs=58.2
Q ss_pred CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhccc
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDEN 212 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~ 212 (452)
++..++|.-.|.|..+..+++.. ...|+|+|.++.+++.|++++...+. .++.+++.++..+. .
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~------~~~~~~~~d~~~~~-----~--- 142 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEGK------RVRNYFCCGLQDFT-----P--- 142 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGGG------GEEEEEECCGGGCC-----C---
T ss_pred CCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcCC------ceEEEEEcChhhcC-----C---
Confidence 57899999999999999888776 24799999999999999998766421 26778888776532 0
Q ss_pred ccccCccEEEEcc
Q 012954 213 ILRSGVDAILMDL 225 (452)
Q Consensus 213 l~~~~VDGILfDL 225 (452)
....+|.|+++.
T Consensus 143 -~~~~fD~v~~~~ 154 (241)
T 2ex4_A 143 -EPDSYDVIWIQW 154 (241)
T ss_dssp -CSSCEEEEEEES
T ss_pred -CCCCEEEEEEcc
Confidence 123699999763
No 140
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=96.53 E-value=0.006 Score=54.52 Aligned_cols=70 Identities=16% Similarity=0.169 Sum_probs=54.6
Q ss_pred CCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhcc
Q 012954 132 RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDE 211 (452)
Q Consensus 132 ~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~ 211 (452)
.++..++|.-.|.|+.+..+.+. +. ..|+|+|+++.+++.|++++. +++++++++.++.
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~-~~-~~v~~vD~~~~~~~~a~~~~~-----------~~~~~~~d~~~~~-------- 108 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLL-GA-ESVTAFDIDPDAIETAKRNCG-----------GVNFMVADVSEIS-------- 108 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHT-TB-SEEEEEESCHHHHHHHHHHCT-----------TSEEEECCGGGCC--------
T ss_pred CCCCEEEEEeCCccHHHHHHHHc-CC-CEEEEEECCHHHHHHHHHhcC-----------CCEEEECcHHHCC--------
Confidence 46789999999999999988876 33 469999999999999988653 3566777776531
Q ss_pred cccccCccEEEEccC
Q 012954 212 NILRSGVDAILMDLG 226 (452)
Q Consensus 212 ~l~~~~VDGILfDLG 226 (452)
..+|.|++|.=
T Consensus 109 ----~~~D~v~~~~p 119 (200)
T 1ne2_A 109 ----GKYDTWIMNPP 119 (200)
T ss_dssp ----CCEEEEEECCC
T ss_pred ----CCeeEEEECCC
Confidence 26899998643
No 141
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=96.51 E-value=0.0073 Score=54.84 Aligned_cols=86 Identities=17% Similarity=0.177 Sum_probs=64.3
Q ss_pred ccccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEE
Q 012954 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTF 195 (452)
Q Consensus 116 H~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li 195 (452)
.+.-+++.+++.+. ++..++|.-.|.|.++..+++. ..++|+|.++.+++.|++++...+ .++.++
T Consensus 19 ~~~~~~~~~~~~~~---~~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~-------~~~~~~ 84 (243)
T 3d2l_A 19 PYPEWVAWVLEQVE---PGKRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETN-------RHVDFW 84 (243)
T ss_dssp CHHHHHHHHHHHSC---TTCEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTT-------CCCEEE
T ss_pred cHHHHHHHHHHHcC---CCCeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcC-------CceEEE
Confidence 34456667777764 5689999999999998888765 479999999999999999876543 257777
Q ss_pred ccCcchHHHHHhhhcccccccCccEEEEcc
Q 012954 196 AKNFRHIKSVLGQIDENILRSGVDAILMDL 225 (452)
Q Consensus 196 ~~nF~~i~~~L~~~~~~l~~~~VDGILfDL 225 (452)
+.++.++. . ...+|.|+...
T Consensus 85 ~~d~~~~~-----~-----~~~fD~v~~~~ 104 (243)
T 3d2l_A 85 VQDMRELE-----L-----PEPVDAITILC 104 (243)
T ss_dssp ECCGGGCC-----C-----SSCEEEEEECT
T ss_pred EcChhhcC-----C-----CCCcCEEEEeC
Confidence 87776531 1 13689888754
No 142
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=96.50 E-value=0.0097 Score=60.13 Aligned_cols=90 Identities=14% Similarity=0.131 Sum_probs=67.9
Q ss_pred HHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchH
Q 012954 123 EVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHI 202 (452)
Q Consensus 123 Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i 202 (452)
-+++.|. ..+++.++|.-+|.|..+..+++..|. ..|+|+|+++.+++.|+++++..+.. ...+++++.+++..
T Consensus 213 ~ll~~l~-~~~~~~VLDlGcG~G~~s~~la~~~p~-~~V~gvD~s~~al~~Ar~n~~~ngl~---~~~~v~~~~~D~~~- 286 (375)
T 4dcm_A 213 FFMQHLP-ENLEGEIVDLGCGNGVIGLTLLDKNPQ-AKVVFVDESPMAVASSRLNVETNMPE---ALDRCEFMINNALS- 286 (375)
T ss_dssp HHHHTCC-CSCCSEEEEETCTTCHHHHHHHHHCTT-CEEEEEESCHHHHHHHHHHHHHHCGG---GGGGEEEEECSTTT-
T ss_pred HHHHhCc-ccCCCeEEEEeCcchHHHHHHHHHCCC-CEEEEEECcHHHHHHHHHHHHHcCCC---cCceEEEEechhhc-
Confidence 3677786 456789999999999999999998876 47999999999999999988765421 01257777777654
Q ss_pred HHHHhhhcccccccCccEEEEccCC
Q 012954 203 KSVLGQIDENILRSGVDAILMDLGM 227 (452)
Q Consensus 203 ~~~L~~~~~~l~~~~VDGILfDLGv 227 (452)
.+ ....+|.|+.|.-+
T Consensus 287 --~~-------~~~~fD~Ii~nppf 302 (375)
T 4dcm_A 287 --GV-------EPFRFNAVLCNPPF 302 (375)
T ss_dssp --TC-------CTTCEEEEEECCCC
T ss_pred --cC-------CCCCeeEEEECCCc
Confidence 11 12469999988554
No 143
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=96.50 E-value=0.0097 Score=52.84 Aligned_cols=82 Identities=17% Similarity=0.110 Sum_probs=61.9
Q ss_pred chHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCc
Q 012954 120 MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNF 199 (452)
Q Consensus 120 Ll~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF 199 (452)
.+.+.+..+. ++ .++|.-.|.|..+..+++. + ..++|+|.++.+++.|++++...+. ++.+++.++
T Consensus 20 ~l~~~~~~~~---~~-~vLdiGcG~G~~~~~l~~~-~--~~v~~vD~s~~~~~~a~~~~~~~~~-------~~~~~~~d~ 85 (202)
T 2kw5_A 20 FLVSVANQIP---QG-KILCLAEGEGRNACFLASL-G--YEVTAVDQSSVGLAKAKQLAQEKGV-------KITTVQSNL 85 (202)
T ss_dssp SHHHHHHHSC---SS-EEEECCCSCTHHHHHHHTT-T--CEEEEECSSHHHHHHHHHHHHHHTC-------CEEEECCBT
T ss_pred HHHHHHHhCC---CC-CEEEECCCCCHhHHHHHhC-C--CeEEEEECCHHHHHHHHHHHHhcCC-------ceEEEEcCh
Confidence 5677777663 55 9999999999988888765 2 3799999999999999998876532 677888877
Q ss_pred chHHHHHhhhcccccccCccEEEEc
Q 012954 200 RHIKSVLGQIDENILRSGVDAILMD 224 (452)
Q Consensus 200 ~~i~~~L~~~~~~l~~~~VDGILfD 224 (452)
..+. . ....+|.|+..
T Consensus 86 ~~~~-----~----~~~~fD~v~~~ 101 (202)
T 2kw5_A 86 ADFD-----I----VADAWEGIVSI 101 (202)
T ss_dssp TTBS-----C----CTTTCSEEEEE
T ss_pred hhcC-----C----CcCCccEEEEE
Confidence 6541 1 12469999864
No 144
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=96.46 E-value=0.0049 Score=54.85 Aligned_cols=88 Identities=15% Similarity=0.134 Sum_probs=61.5
Q ss_pred cchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccC
Q 012954 119 VMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKN 198 (452)
Q Consensus 119 VLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~n 198 (452)
..+.+.++.+....++..++|+-.|.|..+..++...+ ..++|+|.++.+++.|++++...+. ++.+++.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~-------~~~~~~~d 79 (209)
T 2p8j_A 9 PQLYRFLKYCNESNLDKTVLDCGAGGDLPPLSIFVEDG--YKTYGIEISDLQLKKAENFSRENNF-------KLNISKGD 79 (209)
T ss_dssp THHHHHHHHHHHSSSCSEEEEESCCSSSCTHHHHHHTT--CEEEEEECCHHHHHHHHHHHHHHTC-------CCCEEECC
T ss_pred hhHHHHHHHHhccCCCCEEEEECCCCCHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcCC-------ceEEEECc
Confidence 34566666664334678999999999988777776643 4799999999999999998765432 45666776
Q ss_pred cchHHHHHhhhcccccccCccEEEEc
Q 012954 199 FRHIKSVLGQIDENILRSGVDAILMD 224 (452)
Q Consensus 199 F~~i~~~L~~~~~~l~~~~VDGILfD 224 (452)
..++. . ....+|.|+..
T Consensus 80 ~~~~~-----~----~~~~fD~v~~~ 96 (209)
T 2p8j_A 80 IRKLP-----F----KDESMSFVYSY 96 (209)
T ss_dssp TTSCC-----S----CTTCEEEEEEC
T ss_pred hhhCC-----C----CCCceeEEEEc
Confidence 65431 1 12358888763
No 145
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=96.46 E-value=0.0049 Score=63.23 Aligned_cols=81 Identities=9% Similarity=0.010 Sum_probs=63.6
Q ss_pred CCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCce-EEEEccCcchHHHHHh-hh
Q 012954 132 RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLK-THTFAKNFRHIKSVLG-QI 209 (452)
Q Consensus 132 ~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r-~~li~~nF~~i~~~L~-~~ 209 (452)
+++..++|+-.|.|+=+..++++.+..+.|+++|+|+.|++.++++++..+. .++ +++++++-.. ++. ..
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl-----~~~~v~v~~~Da~~---~l~~~~ 122 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNI-----PEDRYEIHGMEANF---FLRKEW 122 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTC-----CGGGEEEECSCHHH---HHHSCC
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCC-----CCceEEEEeCCHHH---HHHHhh
Confidence 3678999999999999999999865546799999999999999999887643 234 8888876543 343 32
Q ss_pred cccccccCccEEEEcc
Q 012954 210 DENILRSGVDAILMDL 225 (452)
Q Consensus 210 ~~~l~~~~VDGILfDL 225 (452)
. ..+|.|++|-
T Consensus 123 ~-----~~fD~V~lDP 133 (392)
T 3axs_A 123 G-----FGFDYVDLDP 133 (392)
T ss_dssp S-----SCEEEEEECC
T ss_pred C-----CCCcEEEECC
Confidence 1 3699999997
No 146
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=96.45 E-value=0.0073 Score=61.03 Aligned_cols=80 Identities=14% Similarity=0.047 Sum_probs=59.3
Q ss_pred CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCc-eEEEEccCcchHHHHHhhhcc
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHL-KTHTFAKNFRHIKSVLGQIDE 211 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~-r~~li~~nF~~i~~~L~~~~~ 211 (452)
++..++|+-.|.|+-+..+++. + ...|+|+|+++.|++.|+++++..+. .. ++++++++..+....+...+
T Consensus 212 ~~~~VLDl~cGtG~~sl~la~~-g-a~~V~~vD~s~~al~~A~~N~~~n~~-----~~~~v~~~~~D~~~~l~~~~~~~- 283 (385)
T 2b78_A 212 AGKTVLNLFSYTAAFSVAAAMG-G-AMATTSVDLAKRSRALSLAHFEANHL-----DMANHQLVVMDVFDYFKYARRHH- 283 (385)
T ss_dssp BTCEEEEETCTTTHHHHHHHHT-T-BSEEEEEESCTTHHHHHHHHHHHTTC-----CCTTEEEEESCHHHHHHHHHHTT-
T ss_pred CCCeEEEEeeccCHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHHcCC-----CccceEEEECCHHHHHHHHHHhC-
Confidence 6789999999999999999875 2 24799999999999999998876542 12 68888887654322222111
Q ss_pred cccccCccEEEEc
Q 012954 212 NILRSGVDAILMD 224 (452)
Q Consensus 212 ~l~~~~VDGILfD 224 (452)
..+|.|++|
T Consensus 284 ----~~fD~Ii~D 292 (385)
T 2b78_A 284 ----LTYDIIIID 292 (385)
T ss_dssp ----CCEEEEEEC
T ss_pred ----CCccEEEEC
Confidence 369999987
No 147
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=96.45 E-value=0.006 Score=55.46 Aligned_cols=80 Identities=9% Similarity=0.008 Sum_probs=55.8
Q ss_pred chHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccC---CC---CCCceEE
Q 012954 120 MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHG---QA---HPHLKTH 193 (452)
Q Consensus 120 Ll~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~---~~---~~~~r~~ 193 (452)
.+.+.++.+. ..++..++|.-+|.|.++..+++. + ..|+|+|..+.+++.|+++....... .. ....+++
T Consensus 10 ~l~~~~~~l~-~~~~~~vLD~GCG~G~~~~~la~~-g--~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~ 85 (203)
T 1pjz_A 10 DLQQYWSSLN-VVPGARVLVPLCGKSQDMSWLSGQ-G--YHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIE 85 (203)
T ss_dssp HHHHHHHHHC-CCTTCEEEETTTCCSHHHHHHHHH-C--CEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSE
T ss_pred HHHHHHHhcc-cCCCCEEEEeCCCCcHhHHHHHHC-C--CeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccE
Confidence 3556677775 347889999999999999998876 2 36999999999999999875420000 00 0012577
Q ss_pred EEccCcchHH
Q 012954 194 TFAKNFRHIK 203 (452)
Q Consensus 194 li~~nF~~i~ 203 (452)
++++++.++.
T Consensus 86 ~~~~d~~~l~ 95 (203)
T 1pjz_A 86 IWCGDFFALT 95 (203)
T ss_dssp EEEECCSSST
T ss_pred EEECccccCC
Confidence 7888877653
No 148
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=96.45 E-value=0.01 Score=56.88 Aligned_cols=98 Identities=8% Similarity=0.053 Sum_probs=71.9
Q ss_pred CCCccccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceE
Q 012954 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKT 192 (452)
Q Consensus 113 ~~~H~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~ 192 (452)
|+-+-|-+++.+++.+. ..++..++|.-.|.|..|. |++.+. .+|+|+|+|+.+++.+++++..+ .++
T Consensus 2 nfL~d~~i~~~iv~~~~-~~~~~~VLEIG~G~G~lt~--l~~~~~-~~v~avEid~~~~~~a~~~~~~~--------~~v 69 (252)
T 1qyr_A 2 NFLNDQFVIDSIVSAIN-PQKGQAMVEIGPGLAALTE--PVGERL-DQLTVIELDRDLAARLQTHPFLG--------PKL 69 (252)
T ss_dssp CEECCHHHHHHHHHHHC-CCTTCCEEEECCTTTTTHH--HHHTTC-SCEEEECCCHHHHHHHHTCTTTG--------GGE
T ss_pred CCcCCHHHHHHHHHhcC-CCCcCEEEEECCCCcHHHH--hhhCCC-CeEEEEECCHHHHHHHHHHhccC--------Cce
Confidence 45566788999999997 4688899999999999999 565422 23999999999999998876542 278
Q ss_pred EEEccCcchHH--HHHhhhcccccccCccEEEEccCCC
Q 012954 193 HTFAKNFRHIK--SVLGQIDENILRSGVDAILMDLGMS 228 (452)
Q Consensus 193 ~li~~nF~~i~--~~L~~~~~~l~~~~VDGILfDLGvS 228 (452)
+++++++..++ +.... ....+.|+.||-|.
T Consensus 70 ~~i~~D~~~~~~~~~~~~------~~~~~~vvsNlPY~ 101 (252)
T 1qyr_A 70 TIYQQDAMTFNFGELAEK------MGQPLRVFGNLPYN 101 (252)
T ss_dssp EEECSCGGGCCHHHHHHH------HTSCEEEEEECCTT
T ss_pred EEEECchhhCCHHHhhcc------cCCceEEEECCCCC
Confidence 99999987642 22110 01356788888664
No 149
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=96.39 E-value=0.016 Score=59.23 Aligned_cols=85 Identities=15% Similarity=0.118 Sum_probs=59.2
Q ss_pred HHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcch
Q 012954 122 GEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRH 201 (452)
Q Consensus 122 ~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~ 201 (452)
...+..+. +++..++|+..|.|+-|..++.. + ..|+|+|+++.|++.|+++++..+.. .++ .+++
T Consensus 205 r~~l~~~~--~~g~~VLDlg~GtG~~sl~~a~~-g--a~V~avDis~~al~~a~~n~~~ng~~-----~~~--~~~D--- 269 (393)
T 4dmg_A 205 RRLFEAMV--RPGERVLDVYSYVGGFALRAARK-G--AYALAVDKDLEALGVLDQAALRLGLR-----VDI--RHGE--- 269 (393)
T ss_dssp HHHHHTTC--CTTCEEEEESCTTTHHHHHHHHT-T--CEEEEEESCHHHHHHHHHHHHHHTCC-----CEE--EESC---
T ss_pred HHHHHHHh--cCCCeEEEcccchhHHHHHHHHc-C--CeEEEEECCHHHHHHHHHHHHHhCCC-----CcE--EEcc---
Confidence 34444443 36899999999999999999875 2 23999999999999999988766431 233 3333
Q ss_pred HHHHHhhhcccccccCccEEEEccC
Q 012954 202 IKSVLGQIDENILRSGVDAILMDLG 226 (452)
Q Consensus 202 i~~~L~~~~~~l~~~~VDGILfDLG 226 (452)
+.+++.... ..+|.|++|..
T Consensus 270 ~~~~l~~~~-----~~fD~Ii~dpP 289 (393)
T 4dmg_A 270 ALPTLRGLE-----GPFHHVLLDPP 289 (393)
T ss_dssp HHHHHHTCC-----CCEEEEEECCC
T ss_pred HHHHHHHhc-----CCCCEEEECCC
Confidence 334444321 24999998743
No 150
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=96.39 E-value=0.005 Score=55.37 Aligned_cols=81 Identities=11% Similarity=0.249 Sum_probs=62.4
Q ss_pred hHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcc
Q 012954 121 LGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFR 200 (452)
Q Consensus 121 l~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~ 200 (452)
..++++.+. ..++..++|.-.|.|..+..+++. ...++|+|.++.+++.|++++. . ++.++++++.
T Consensus 34 ~~~~l~~~~-~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~---~-------~~~~~~~d~~ 99 (220)
T 3hnr_A 34 YEDILEDVV-NKSFGNVLEFGVGTGNLTNKLLLA---GRTVYGIEPSREMRMIAKEKLP---K-------EFSITEGDFL 99 (220)
T ss_dssp HHHHHHHHH-HTCCSEEEEECCTTSHHHHHHHHT---TCEEEEECSCHHHHHHHHHHSC---T-------TCCEESCCSS
T ss_pred HHHHHHHhh-ccCCCeEEEeCCCCCHHHHHHHhC---CCeEEEEeCCHHHHHHHHHhCC---C-------ceEEEeCChh
Confidence 457777776 357889999999999999998886 2479999999999999988754 1 4667788776
Q ss_pred hHHHHHhhhcccccccCccEEEEcc
Q 012954 201 HIKSVLGQIDENILRSGVDAILMDL 225 (452)
Q Consensus 201 ~i~~~L~~~~~~l~~~~VDGILfDL 225 (452)
++. .. ..+|.|+...
T Consensus 100 ~~~---------~~-~~fD~v~~~~ 114 (220)
T 3hnr_A 100 SFE---------VP-TSIDTIVSTY 114 (220)
T ss_dssp SCC---------CC-SCCSEEEEES
T ss_pred hcC---------CC-CCeEEEEECc
Confidence 541 01 4699998863
No 151
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=96.38 E-value=0.013 Score=53.81 Aligned_cols=78 Identities=19% Similarity=0.151 Sum_probs=59.1
Q ss_pred CCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhcc
Q 012954 132 RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDE 211 (452)
Q Consensus 132 ~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~ 211 (452)
.++..++|.-+|.|..+..+++..+ .|+|+|.++.+++.|++++.. .++.+++.++.++..... .+.
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~~~---------~~~~~~~~d~~~~~~~~~-~~~ 121 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFP---RVIGLDVSKSALEIAAKENTA---------ANISYRLLDGLVPEQAAQ-IHS 121 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSS---CEEEEESCHHHHHHHHHHSCC---------TTEEEEECCTTCHHHHHH-HHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCC---CEEEEECCHHHHHHHHHhCcc---------cCceEEECcccccccccc-ccc
Confidence 4678999999999999999998865 489999999999999987621 268889999888754321 110
Q ss_pred cccccCccEEEEcc
Q 012954 212 NILRSGVDAILMDL 225 (452)
Q Consensus 212 ~l~~~~VDGILfDL 225 (452)
...+|.|+.+.
T Consensus 122 ---~~~~d~v~~~~ 132 (245)
T 3ggd_A 122 ---EIGDANIYMRT 132 (245)
T ss_dssp ---HHCSCEEEEES
T ss_pred ---ccCccEEEEcc
Confidence 12488888763
No 152
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=96.38 E-value=0.01 Score=54.76 Aligned_cols=87 Identities=16% Similarity=0.093 Sum_probs=66.4
Q ss_pred chHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCc
Q 012954 120 MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNF 199 (452)
Q Consensus 120 Ll~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF 199 (452)
.....++.+. ..++..++|.-.|.|..+..+++..+ .|+|+|.++.+++.|++++...+. .++.++++++
T Consensus 9 ~~~~~~~~~~-~~~~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~------~~v~~~~~d~ 78 (239)
T 1xxl_A 9 SLGLMIKTAE-CRAEHRVLDIGAGAGHTALAFSPYVQ---ECIGVDATKEMVEVASSFAQEKGV------ENVRFQQGTA 78 (239)
T ss_dssp HHHHHHHHHT-CCTTCEEEEESCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHHTC------CSEEEEECBT
T ss_pred CcchHHHHhC-cCCCCEEEEEccCcCHHHHHHHHhCC---EEEEEECCHHHHHHHHHHHHHcCC------CCeEEEeccc
Confidence 3466788887 56889999999999988888877653 699999999999999998876543 2578888877
Q ss_pred chHHHHHhhhcccccccCccEEEEcc
Q 012954 200 RHIKSVLGQIDENILRSGVDAILMDL 225 (452)
Q Consensus 200 ~~i~~~L~~~~~~l~~~~VDGILfDL 225 (452)
..+. . ....+|.|+...
T Consensus 79 ~~~~-----~----~~~~fD~v~~~~ 95 (239)
T 1xxl_A 79 ESLP-----F----PDDSFDIITCRY 95 (239)
T ss_dssp TBCC-----S----CTTCEEEEEEES
T ss_pred ccCC-----C----CCCcEEEEEECC
Confidence 6532 1 124689998764
No 153
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=96.37 E-value=0.021 Score=54.78 Aligned_cols=95 Identities=24% Similarity=0.330 Sum_probs=62.8
Q ss_pred chHHHHhhccCCCCCCEEEEEccCC---ChhHHHHHHh-CCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEE
Q 012954 120 MLGEVLDVFSSSRTITSFVDCTLGA---AGHSSAIIRA-HPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTF 195 (452)
Q Consensus 120 Ll~Evl~~L~~~~~ggiyVDaTlG~---GGHS~aIL~~-~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li 195 (452)
++..+++.|........++|.=+|. |. ...++.+ .|. .+|+++|.||.+++.|++++... .+++++
T Consensus 64 ~~~~~~~~l~~~~~~~~vLDlGcG~pt~G~-~~~~~~~~~p~-~~v~~vD~sp~~l~~Ar~~~~~~--------~~v~~~ 133 (274)
T 2qe6_A 64 VLVRGVRFLAGEAGISQFLDLGSGLPTVQN-THEVAQSVNPD-ARVVYVDIDPMVLTHGRALLAKD--------PNTAVF 133 (274)
T ss_dssp HHHHHHHHHHTTTCCCEEEEETCCSCCSSC-HHHHHHHHCTT-CEEEEEESSHHHHHHHHHHHTTC--------TTEEEE
T ss_pred HHHHHHHHHhhccCCCEEEEECCCCCCCCh-HHHHHHHhCCC-CEEEEEECChHHHHHHHHhcCCC--------CCeEEE
Confidence 3556667775222447999999999 84 4444544 565 57999999999999999987431 368899
Q ss_pred ccCcchHHHHHhhhc--ccccccCccEEEEc
Q 012954 196 AKNFRHIKSVLGQID--ENILRSGVDAILMD 224 (452)
Q Consensus 196 ~~nF~~i~~~L~~~~--~~l~~~~VDGILfD 224 (452)
++++.+...++.... ..+....+|+|++.
T Consensus 134 ~~D~~~~~~~~~~~~~~~~~d~~~~d~v~~~ 164 (274)
T 2qe6_A 134 TADVRDPEYILNHPDVRRMIDFSRPAAIMLV 164 (274)
T ss_dssp ECCTTCHHHHHHSHHHHHHCCTTSCCEEEET
T ss_pred EeeCCCchhhhccchhhccCCCCCCEEEEEe
Confidence 999987654432110 00111357777764
No 154
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=96.35 E-value=0.0092 Score=59.06 Aligned_cols=73 Identities=18% Similarity=0.221 Sum_probs=58.4
Q ss_pred CCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhcc
Q 012954 132 RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDE 211 (452)
Q Consensus 132 ~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~ 211 (452)
.++..++|+..|.|+.+.. ++ + ...|+|+|+++.|++.|+++++..+. ..++++++++..++.
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~--~-~~~V~~vD~s~~ai~~a~~n~~~n~l-----~~~v~~~~~D~~~~~-------- 256 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK--N-AKKIYAIDINPHAIELLKKNIKLNKL-----EHKIIPILSDVREVD-------- 256 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT--T-SSEEEEEESCHHHHHHHHHHHHHTTC-----TTTEEEEESCGGGCC--------
T ss_pred CCCCEEEEccCccCHHHHh-cc--C-CCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEECChHHhc--------
Confidence 3688999999999999988 65 3 46799999999999999998876543 136888888876431
Q ss_pred cccccCccEEEEcc
Q 012954 212 NILRSGVDAILMDL 225 (452)
Q Consensus 212 ~l~~~~VDGILfDL 225 (452)
..+|.|++|.
T Consensus 257 ----~~fD~Vi~dp 266 (336)
T 2yx1_A 257 ----VKGNRVIMNL 266 (336)
T ss_dssp ----CCEEEEEECC
T ss_pred ----CCCcEEEECC
Confidence 2699999985
No 155
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=96.34 E-value=0.0053 Score=56.47 Aligned_cols=85 Identities=15% Similarity=0.133 Sum_probs=62.2
Q ss_pred ccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEcc
Q 012954 118 PVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAK 197 (452)
Q Consensus 118 PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~ 197 (452)
.-...++++.+. ..++..++|.-.|.|..+..+++.+|. ..++|+|.++.+++.++++.. ++.+++.
T Consensus 19 ~~~~~~l~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~-~~v~~~D~s~~~~~~a~~~~~-----------~~~~~~~ 85 (259)
T 2p35_A 19 TRPARDLLAQVP-LERVLNGYDLGCGPGNSTELLTDRYGV-NVITGIDSDDDMLEKAADRLP-----------NTNFGKA 85 (259)
T ss_dssp GHHHHHHHTTCC-CSCCSSEEEETCTTTHHHHHHHHHHCT-TSEEEEESCHHHHHHHHHHST-----------TSEEEEC
T ss_pred HHHHHHHHHhcC-CCCCCEEEEecCcCCHHHHHHHHhCCC-CEEEEEECCHHHHHHHHHhCC-----------CcEEEEC
Confidence 334567888886 457889999999999999999988765 469999999999999987621 3455666
Q ss_pred CcchHHHHHhhhcccccccCccEEEEcc
Q 012954 198 NFRHIKSVLGQIDENILRSGVDAILMDL 225 (452)
Q Consensus 198 nF~~i~~~L~~~~~~l~~~~VDGILfDL 225 (452)
++..+. . ...+|.|+...
T Consensus 86 d~~~~~---~-------~~~fD~v~~~~ 103 (259)
T 2p35_A 86 DLATWK---P-------AQKADLLYANA 103 (259)
T ss_dssp CTTTCC---C-------SSCEEEEEEES
T ss_pred ChhhcC---c-------cCCcCEEEEeC
Confidence 665432 0 13577777654
No 156
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=96.31 E-value=0.012 Score=54.22 Aligned_cols=84 Identities=17% Similarity=0.171 Sum_probs=63.2
Q ss_pred hHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcc
Q 012954 121 LGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFR 200 (452)
Q Consensus 121 l~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~ 200 (452)
...+++.+. ..++..++|.-.|.|..+..+++..+. .|+|+|+++.+++.|++++.. .++.++..++.
T Consensus 33 ~~~l~~~~~-~~~~~~vLD~GcG~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~---------~~~~~~~~d~~ 100 (253)
T 3g5l_A 33 WHELKKMLP-DFNQKTVLDLGCGFGWHCIYAAEHGAK--KVLGIDLSERMLTEAKRKTTS---------PVVCYEQKAIE 100 (253)
T ss_dssp HHHHHTTCC-CCTTCEEEEETCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHCCC---------TTEEEEECCGG
T ss_pred HHHHHHhhh-ccCCCEEEEECCCCCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHhhcc---------CCeEEEEcchh
Confidence 345566665 357889999999999999999887432 699999999999999987641 26788888886
Q ss_pred hHHHHHhhhcccccccCccEEEEcc
Q 012954 201 HIKSVLGQIDENILRSGVDAILMDL 225 (452)
Q Consensus 201 ~i~~~L~~~~~~l~~~~VDGILfDL 225 (452)
.+. . ....+|.|+...
T Consensus 101 ~~~-----~----~~~~fD~v~~~~ 116 (253)
T 3g5l_A 101 DIA-----I----EPDAYNVVLSSL 116 (253)
T ss_dssp GCC-----C----CTTCEEEEEEES
T ss_pred hCC-----C----CCCCeEEEEEch
Confidence 542 1 124699999853
No 157
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=96.30 E-value=0.013 Score=59.46 Aligned_cols=78 Identities=8% Similarity=-0.066 Sum_probs=60.7
Q ss_pred CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhh---------------ccCCCCCCceEEEEcc
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSL---------------LHGQAHPHLKTHTFAK 197 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~---------------~~~~~~~~~r~~li~~ 197 (452)
++..++|+-.|.|+-+..+++..+.. +|+++|+|++|++.++++++.. +. .+++++++
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~-~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl------~~i~v~~~ 119 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAE-EVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGE------KTIVINHD 119 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCS-EEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESS------SEEEEEES
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCC-eEEEEECCHHHHHHHHHHHHHhcccccccccccccccCC------CceEEEcC
Confidence 46799999999999999999987754 6999999999999999988765 32 24778887
Q ss_pred CcchHHHHHhhhcccccccCccEEEEcc
Q 012954 198 NFRHIKSVLGQIDENILRSGVDAILMDL 225 (452)
Q Consensus 198 nF~~i~~~L~~~~~~l~~~~VDGILfDL 225 (452)
+...+ +.... ..+|.|++|=
T Consensus 120 Da~~~---~~~~~-----~~fD~I~lDP 139 (378)
T 2dul_A 120 DANRL---MAERH-----RYFHFIDLDP 139 (378)
T ss_dssp CHHHH---HHHST-----TCEEEEEECC
T ss_pred cHHHH---HHhcc-----CCCCEEEeCC
Confidence 76544 32211 3599999883
No 158
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=96.28 E-value=0.0082 Score=57.75 Aligned_cols=61 Identities=13% Similarity=0.281 Sum_probs=48.8
Q ss_pred cchHHHHhhccCC-CCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhh
Q 012954 119 VMLGEVLDVFSSS-RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSL 181 (452)
Q Consensus 119 VLl~Evl~~L~~~-~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~ 181 (452)
++++++++.+... .++..++|.-+|.|+++..+++. + ...|+|+|+++.+++.|++++...
T Consensus 19 ~l~~~~~~~l~~~~~~~~~VLDlGcG~G~~~~~l~~~-~-~~~v~gvD~s~~~l~~a~~~~~~~ 80 (313)
T 3bgv_A 19 VLIGEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKG-R-INKLVCTDIADVSVKQCQQRYEDM 80 (313)
T ss_dssp HHHHHHHHHHHHTC--CCEEEEETCTTTTTHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhccCCCCEEEEECCCCcHHHHHHHhc-C-CCEEEEEeCCHHHHHHHHHHHHHh
Confidence 6788888877521 26789999999999999999874 3 357999999999999999887653
No 159
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=96.25 E-value=0.0089 Score=60.68 Aligned_cols=93 Identities=11% Similarity=0.004 Sum_probs=66.3
Q ss_pred cchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCC-------------------------------------CCEE
Q 012954 119 VMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPE-------------------------------------LKLH 161 (452)
Q Consensus 119 VLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~-------------------------------------~g~V 161 (452)
.|..-++.... ..++..++|..+|.|+-....+....+ ...|
T Consensus 182 ~lAa~ll~~~~-~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V 260 (385)
T 3ldu_A 182 TLAAGLIYLTP-WKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKI 260 (385)
T ss_dssp HHHHHHHHTSC-CCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCE
T ss_pred HHHHHHHHhhC-CCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceE
Confidence 34555555554 467889999999999887776654211 1359
Q ss_pred EEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhcccccccCccEEEEccCC
Q 012954 162 IGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGM 227 (452)
Q Consensus 162 igfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~l~~~~VDGILfDLGv 227 (452)
+|+|+|+.|++.|+++++..+. ..++++.+.++.++. . ...+|.|+.|--|
T Consensus 261 ~GvDid~~ai~~Ar~Na~~~gl-----~~~i~~~~~D~~~l~---~-------~~~~D~Iv~NPPy 311 (385)
T 3ldu_A 261 YGYDIDEESIDIARENAEIAGV-----DEYIEFNVGDATQFK---S-------EDEFGFIITNPPY 311 (385)
T ss_dssp EEEESCHHHHHHHHHHHHHHTC-----GGGEEEEECCGGGCC---C-------SCBSCEEEECCCC
T ss_pred EEEECCHHHHHHHHHHHHHcCC-----CCceEEEECChhhcC---c-------CCCCcEEEECCCC
Confidence 9999999999999999877653 236888888887642 0 1358889887554
No 160
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=96.23 E-value=0.013 Score=53.58 Aligned_cols=82 Identities=10% Similarity=0.145 Sum_probs=62.7
Q ss_pred HHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcch
Q 012954 122 GEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRH 201 (452)
Q Consensus 122 ~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~ 201 (452)
.++++.+. ..++..++|.-.|.|..+..+++.. ...|+|+|.++.+++.|++++... .++.+++.++..
T Consensus 83 ~~~l~~l~-~~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~--------~~~~~~~~d~~~ 151 (254)
T 1xtp_A 83 RNFIASLP-GHGTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAGM--------PVGKFILASMET 151 (254)
T ss_dssp HHHHHTST-TCCCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTTS--------SEEEEEESCGGG
T ss_pred HHHHHhhc-ccCCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhccC--------CceEEEEccHHH
Confidence 56677775 4578899999999999999998875 246999999999999999876543 267888887765
Q ss_pred HHHHHhhhcccccccCccEEEE
Q 012954 202 IKSVLGQIDENILRSGVDAILM 223 (452)
Q Consensus 202 i~~~L~~~~~~l~~~~VDGILf 223 (452)
+. . ....+|.|+.
T Consensus 152 ~~-----~----~~~~fD~v~~ 164 (254)
T 1xtp_A 152 AT-----L----PPNTYDLIVI 164 (254)
T ss_dssp CC-----C----CSSCEEEEEE
T ss_pred CC-----C----CCCCeEEEEE
Confidence 31 1 1246898886
No 161
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=96.22 E-value=0.024 Score=53.01 Aligned_cols=79 Identities=20% Similarity=0.195 Sum_probs=60.0
Q ss_pred CCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhcc
Q 012954 132 RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDE 211 (452)
Q Consensus 132 ~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~ 211 (452)
.++..++|.-+|.|+++..+++. +. ..++|+|.++.+++.|++++...+. ..++.+++.+..++. +.
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~-~~-~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~--~~---- 129 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERA-GI-GEYYGVDIAEVSINDARVRARNMKR-----RFKVFFRAQDSYGRH--MD---- 129 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHH-TC-SEEEEEESCHHHHHHHHHHHHTSCC-----SSEEEEEESCTTTSC--CC----
T ss_pred CCCCeEEEECCCCCHHHHHHHHC-CC-CEEEEEECCHHHHHHHHHHHHhcCC-----CccEEEEECCccccc--cC----
Confidence 47889999999999999997765 33 4799999999999999998876532 136888888876541 10
Q ss_pred cccccCccEEEEcc
Q 012954 212 NILRSGVDAILMDL 225 (452)
Q Consensus 212 ~l~~~~VDGILfDL 225 (452)
....+|.|+.+.
T Consensus 130 --~~~~fD~v~~~~ 141 (298)
T 1ri5_A 130 --LGKEFDVISSQF 141 (298)
T ss_dssp --CSSCEEEEEEES
T ss_pred --CCCCcCEEEECc
Confidence 124699999874
No 162
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=96.22 E-value=0.0044 Score=59.53 Aligned_cols=77 Identities=19% Similarity=0.180 Sum_probs=60.2
Q ss_pred CCCCEEEEEccCCChhHHHHH-HhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhc
Q 012954 132 RTITSFVDCTLGAAGHSSAII-RAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQID 210 (452)
Q Consensus 132 ~~ggiyVDaTlG~GGHS~aIL-~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~ 210 (452)
.++..++|.-+|.|.++..++ ...+. ..|+|+|+++.+++.|++++...+. ..+++++++++.++.
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~~------- 183 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPG-VQLVGIDYDPEALDGATRLAAGHAL-----AGQITLHRQDAWKLD------- 183 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTT-CEEEEEESCHHHHHHHHHHHTTSTT-----GGGEEEEECCGGGCC-------
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCC-CeEEEEECCHHHHHHHHHHHHhcCC-----CCceEEEECchhcCC-------
Confidence 478899999999999888886 33444 5799999999999999998876543 346899999987642
Q ss_pred ccccccCccEEEEc
Q 012954 211 ENILRSGVDAILMD 224 (452)
Q Consensus 211 ~~l~~~~VDGILfD 224 (452)
. ...+|.|+.+
T Consensus 184 --~-~~~fD~v~~~ 194 (305)
T 3ocj_A 184 --T-REGYDLLTSN 194 (305)
T ss_dssp --C-CSCEEEEECC
T ss_pred --c-cCCeEEEEEC
Confidence 0 1468988864
No 163
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=96.22 E-value=0.0072 Score=53.90 Aligned_cols=95 Identities=17% Similarity=0.121 Sum_probs=66.6
Q ss_pred CCCccccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceE
Q 012954 113 QSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKT 192 (452)
Q Consensus 113 ~~~H~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~ 192 (452)
...+.+....++++.+.. .++..++|.-.|.|..+..+++. ...|+|+|.++.+++.|+++ . +.
T Consensus 33 ~~~~~~~~~~~~~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-----~-------~~ 96 (227)
T 3e8s_A 33 IESRRQVTDQAILLAILG-RQPERVLDLGCGEGWLLRALADR---GIEAVGVDGDRTLVDAARAA-----G-------AG 96 (227)
T ss_dssp CHHHHHTHHHHHHHHHHH-TCCSEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHT-----C-------SS
T ss_pred cccccccccHHHHHHhhc-CCCCEEEEeCCCCCHHHHHHHHC---CCEEEEEcCCHHHHHHHHHh-----c-------cc
Confidence 334555667778888863 46789999999999999998876 24699999999999999875 1 23
Q ss_pred EEEccCcchHHHHHhhhcccccccCccEEEEccCCC
Q 012954 193 HTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMS 228 (452)
Q Consensus 193 ~li~~nF~~i~~~L~~~~~~l~~~~VDGILfDLGvS 228 (452)
.+++.++..+...... ....+|.|+....+.
T Consensus 97 ~~~~~~~~~~~~~~~~-----~~~~fD~v~~~~~l~ 127 (227)
T 3e8s_A 97 EVHLASYAQLAEAKVP-----VGKDYDLICANFALL 127 (227)
T ss_dssp CEEECCHHHHHTTCSC-----CCCCEEEEEEESCCC
T ss_pred ccchhhHHhhcccccc-----cCCCccEEEECchhh
Confidence 4566666655321111 123499999875443
No 164
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=96.21 E-value=0.0068 Score=54.44 Aligned_cols=82 Identities=16% Similarity=0.137 Sum_probs=61.6
Q ss_pred HHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcch
Q 012954 122 GEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRH 201 (452)
Q Consensus 122 ~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~ 201 (452)
.+++..+....++..++|.-.|.|..+..+++.. ..|+|+|+++.+++.|++++... .++++++.++.+
T Consensus 40 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~--------~~~~~~~~d~~~ 108 (216)
T 3ofk_A 40 TQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHC---KRLTVIDVMPRAIGRACQRTKRW--------SHISWAATDILQ 108 (216)
T ss_dssp HHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGE---EEEEEEESCHHHHHHHHHHTTTC--------SSEEEEECCTTT
T ss_pred HHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcccC--------CCeEEEEcchhh
Confidence 3444433224577899999999999999988763 36999999999999999887543 268888888876
Q ss_pred HHHHHhhhcccccccCccEEEEc
Q 012954 202 IKSVLGQIDENILRSGVDAILMD 224 (452)
Q Consensus 202 i~~~L~~~~~~l~~~~VDGILfD 224 (452)
+. . ...+|.|+..
T Consensus 109 ~~---~-------~~~fD~v~~~ 121 (216)
T 3ofk_A 109 FS---T-------AELFDLIVVA 121 (216)
T ss_dssp CC---C-------SCCEEEEEEE
T ss_pred CC---C-------CCCccEEEEc
Confidence 53 1 2469999875
No 165
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=96.21 E-value=0.0036 Score=59.81 Aligned_cols=78 Identities=10% Similarity=0.164 Sum_probs=63.5
Q ss_pred CCCCccccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCce
Q 012954 112 QQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLK 191 (452)
Q Consensus 112 ~~~~H~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r 191 (452)
.++-+-|-+++.+++.+. ..++..++|.-.|.|..|..+++. + ..+|+|+|+|+.+++.++++ . ..+
T Consensus 11 Qnfl~d~~i~~~iv~~~~-~~~~~~VLDiG~G~G~lt~~L~~~-~-~~~v~avEid~~~~~~~~~~--~--------~~~ 77 (249)
T 3ftd_A 11 QHLLVSEGVLKKIAEELN-IEEGNTVVEVGGGTGNLTKVLLQH-P-LKKLYVIELDREMVENLKSI--G--------DER 77 (249)
T ss_dssp SSCEECHHHHHHHHHHTT-CCTTCEEEEEESCHHHHHHHHTTS-C-CSEEEEECCCHHHHHHHTTS--C--------CTT
T ss_pred ccccCCHHHHHHHHHhcC-CCCcCEEEEEcCchHHHHHHHHHc-C-CCeEEEEECCHHHHHHHHhc--c--------CCC
Confidence 455566778999999997 468899999999999999999976 3 35799999999999998765 1 126
Q ss_pred EEEEccCcchH
Q 012954 192 THTFAKNFRHI 202 (452)
Q Consensus 192 ~~li~~nF~~i 202 (452)
++++++++..+
T Consensus 78 v~~i~~D~~~~ 88 (249)
T 3ftd_A 78 LEVINEDASKF 88 (249)
T ss_dssp EEEECSCTTTC
T ss_pred eEEEEcchhhC
Confidence 88899888654
No 166
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=96.21 E-value=0.016 Score=52.63 Aligned_cols=83 Identities=14% Similarity=0.087 Sum_probs=60.8
Q ss_pred hHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcc
Q 012954 121 LGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFR 200 (452)
Q Consensus 121 l~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~ 200 (452)
...+.+.+. ..++..++|.-.|.|..+..+++. +. ..++|+|.++.+++.|++++.. .++.+++.++.
T Consensus 32 ~~~l~~~~~-~~~~~~vLdiG~G~G~~~~~l~~~-~~-~~v~~vD~s~~~~~~a~~~~~~---------~~~~~~~~d~~ 99 (243)
T 3bkw_A 32 WPALRAMLP-EVGGLRIVDLGCGFGWFCRWAHEH-GA-SYVLGLDLSEKMLARARAAGPD---------TGITYERADLD 99 (243)
T ss_dssp HHHHHHHSC-CCTTCEEEEETCTTCHHHHHHHHT-TC-SEEEEEESCHHHHHHHHHTSCS---------SSEEEEECCGG
T ss_pred HHHHHHhcc-ccCCCEEEEEcCcCCHHHHHHHHC-CC-CeEEEEcCCHHHHHHHHHhccc---------CCceEEEcChh
Confidence 345666665 457889999999999999988876 32 3799999999999999886532 25777888776
Q ss_pred hHHHHHhhhcccccccCccEEEEc
Q 012954 201 HIKSVLGQIDENILRSGVDAILMD 224 (452)
Q Consensus 201 ~i~~~L~~~~~~l~~~~VDGILfD 224 (452)
.+. + ....+|.|+..
T Consensus 100 ~~~--~-------~~~~fD~v~~~ 114 (243)
T 3bkw_A 100 KLH--L-------PQDSFDLAYSS 114 (243)
T ss_dssp GCC--C-------CTTCEEEEEEE
T ss_pred hcc--C-------CCCCceEEEEe
Confidence 532 1 12468888873
No 167
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=96.20 E-value=0.015 Score=51.70 Aligned_cols=81 Identities=9% Similarity=0.013 Sum_probs=61.4
Q ss_pred hHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcc
Q 012954 121 LGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFR 200 (452)
Q Consensus 121 l~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~ 200 (452)
+..+++.+....+++.++|.-.|.|..+..+++. ...|+|+|.++.+++.|++ .+ ..++.++++++.
T Consensus 34 ~~~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~s~~~~~~a~~----~~------~~~~~~~~~d~~ 100 (218)
T 3ou2_A 34 APAALERLRAGNIRGDVLELASGTGYWTRHLSGL---ADRVTALDGSAEMIAEAGR----HG------LDNVEFRQQDLF 100 (218)
T ss_dssp HHHHHHHHTTTTSCSEEEEESCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHGG----GC------CTTEEEEECCTT
T ss_pred HHHHHHHHhcCCCCCeEEEECCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHh----cC------CCCeEEEecccc
Confidence 5566666653457789999999999999999887 2479999999999999976 11 136888888886
Q ss_pred hHHHHHhhhcccccccCccEEEEc
Q 012954 201 HIKSVLGQIDENILRSGVDAILMD 224 (452)
Q Consensus 201 ~i~~~L~~~~~~l~~~~VDGILfD 224 (452)
++ .. ...+|.|+..
T Consensus 101 ~~---~~-------~~~~D~v~~~ 114 (218)
T 3ou2_A 101 DW---TP-------DRQWDAVFFA 114 (218)
T ss_dssp SC---CC-------SSCEEEEEEE
T ss_pred cC---CC-------CCceeEEEEe
Confidence 54 11 2469999875
No 168
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=96.18 E-value=0.011 Score=59.23 Aligned_cols=89 Identities=15% Similarity=0.078 Sum_probs=65.1
Q ss_pred CCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhh-----c-cCCCCCCceEEEEccCcchHHHH
Q 012954 132 RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSL-----L-HGQAHPHLKTHTFAKNFRHIKSV 205 (452)
Q Consensus 132 ~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~-----~-~~~~~~~~r~~li~~nF~~i~~~ 205 (452)
.++..++|.-.|.|..+..+++.+++.+.|+|+|+++.+++.|+++++.. + .. ..++.++++++.++...
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~----~~~v~~~~~d~~~l~~~ 157 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPS----RSNVRFLKGFIENLATA 157 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTT----CCCEEEEESCTTCGGGC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccC----CCceEEEEccHHHhhhc
Confidence 36789999999999999999998755568999999999999999987654 1 10 13788899988765321
Q ss_pred HhhhcccccccCccEEEEccCC
Q 012954 206 LGQIDENILRSGVDAILMDLGM 227 (452)
Q Consensus 206 L~~~~~~l~~~~VDGILfDLGv 227 (452)
... .+....+|.|+.+..+
T Consensus 158 ~~~---~~~~~~fD~V~~~~~l 176 (383)
T 4fsd_A 158 EPE---GVPDSSVDIVISNCVC 176 (383)
T ss_dssp BSC---CCCTTCEEEEEEESCG
T ss_pred ccC---CCCCCCEEEEEEccch
Confidence 100 0123469999987433
No 169
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=96.17 E-value=0.0055 Score=55.36 Aligned_cols=80 Identities=15% Similarity=0.160 Sum_probs=56.3
Q ss_pred cchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccC
Q 012954 119 VMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKN 198 (452)
Q Consensus 119 VLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~n 198 (452)
-+..+.++.+. ..++..++|.-+|.|..+..+++..|. ..|+|+|+++.+++.+.+........ .+..++.+++++
T Consensus 14 ~~~~~~~~~l~-~~~~~~vLDiGcG~G~~~~~la~~~p~-~~v~gvD~s~~~l~~~~~~a~~~~~~--~~~~~v~~~~~d 89 (218)
T 3mq2_A 14 EFSDAEFEQLR-SQYDDVVLDVGTGDGKHPYKVARQNPS-RLVVALDADKSRMEKISAKAAAKPAK--GGLPNLLYLWAT 89 (218)
T ss_dssp ECCHHHHHHHH-TTSSEEEEEESCTTCHHHHHHHHHCTT-EEEEEEESCGGGGHHHHHHHTSCGGG--TCCTTEEEEECC
T ss_pred ccCHHHHHHhh-ccCCCEEEEecCCCCHHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhhhh--cCCCceEEEecc
Confidence 36677888887 468899999999999999999998766 57999999999887533222110000 012257777777
Q ss_pred cchH
Q 012954 199 FRHI 202 (452)
Q Consensus 199 F~~i 202 (452)
..++
T Consensus 90 ~~~l 93 (218)
T 3mq2_A 90 AERL 93 (218)
T ss_dssp STTC
T ss_pred hhhC
Confidence 6653
No 170
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=96.14 E-value=0.012 Score=57.50 Aligned_cols=86 Identities=17% Similarity=0.251 Sum_probs=66.9
Q ss_pred HHHHhhccCCCC-CCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcc
Q 012954 122 GEVLDVFSSSRT-ITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFR 200 (452)
Q Consensus 122 ~Evl~~L~~~~~-ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~ 200 (452)
.++++.+. ..+ +..++|.-.|.|..+..+++.+|.. +++++|. +.+++.|++++...+. ..+++++..+|.
T Consensus 168 ~~~l~~~~-~~~~~~~vlDvG~G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~ 239 (352)
T 3mcz_A 168 VDVVSELG-VFARARTVIDLAGGHGTYLAQVLRRHPQL-TGQIWDL-PTTRDAARKTIHAHDL-----GGRVEFFEKNLL 239 (352)
T ss_dssp HHHHHTCG-GGTTCCEEEEETCTTCHHHHHHHHHCTTC-EEEEEEC-GGGHHHHHHHHHHTTC-----GGGEEEEECCTT
T ss_pred HHHHHhCC-CcCCCCEEEEeCCCcCHHHHHHHHhCCCC-eEEEEEC-HHHHHHHHHHHHhcCC-----CCceEEEeCCcc
Confidence 47888875 345 7899999999999999999999874 6999999 8899999998876543 247999999886
Q ss_pred hHHHHHhhhcccccccCccEEEE
Q 012954 201 HIKSVLGQIDENILRSGVDAILM 223 (452)
Q Consensus 201 ~i~~~L~~~~~~l~~~~VDGILf 223 (452)
...... ..++|.|++
T Consensus 240 ~~~~~~--------~~~~D~v~~ 254 (352)
T 3mcz_A 240 DARNFE--------GGAADVVML 254 (352)
T ss_dssp CGGGGT--------TCCEEEEEE
T ss_pred cCcccC--------CCCccEEEE
Confidence 532111 235888887
No 171
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=96.08 E-value=0.011 Score=56.36 Aligned_cols=88 Identities=8% Similarity=0.038 Sum_probs=64.4
Q ss_pred ccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEcc
Q 012954 118 PVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAK 197 (452)
Q Consensus 118 PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~ 197 (452)
.-.+..+++.+. . +++.++|.-+|.|..+..+++. + ..|+|+|+++.+++.|++++...+.. ...++.++++
T Consensus 69 ~~~~~~~~~~~~-~-~~~~vLDlGcG~G~~~~~l~~~-~--~~v~gvD~s~~~~~~a~~~~~~~~~~---~~~~v~~~~~ 140 (299)
T 3g2m_A 69 TSEAREFATRTG-P-VSGPVLELAAGMGRLTFPFLDL-G--WEVTALELSTSVLAAFRKRLAEAPAD---VRDRCTLVQG 140 (299)
T ss_dssp HHHHHHHHHHHC-C-CCSCEEEETCTTTTTHHHHHTT-T--CCEEEEESCHHHHHHHHHHHHTSCHH---HHTTEEEEEC
T ss_pred cHHHHHHHHhhC-C-CCCcEEEEeccCCHHHHHHHHc-C--CeEEEEECCHHHHHHHHHHHhhcccc---cccceEEEeC
Confidence 445677778875 3 4569999999999999999887 2 35999999999999999988764310 0026888888
Q ss_pred CcchHHHHHhhhcccccccCccEEEE
Q 012954 198 NFRHIKSVLGQIDENILRSGVDAILM 223 (452)
Q Consensus 198 nF~~i~~~L~~~~~~l~~~~VDGILf 223 (452)
++.++. . ...+|.|++
T Consensus 141 d~~~~~----~------~~~fD~v~~ 156 (299)
T 3g2m_A 141 DMSAFA----L------DKRFGTVVI 156 (299)
T ss_dssp BTTBCC----C------SCCEEEEEE
T ss_pred chhcCC----c------CCCcCEEEE
Confidence 877642 0 136888875
No 172
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=96.08 E-value=0.015 Score=53.40 Aligned_cols=76 Identities=17% Similarity=0.198 Sum_probs=57.4
Q ss_pred CCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhcc
Q 012954 132 RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDE 211 (452)
Q Consensus 132 ~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~ 211 (452)
.++..++|.-.|.|..+..+++. ...|+|+|.++.+++.|++++... ..++.++++++..+. +
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~-------~~~~~~~~~d~~~~~--~----- 100 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIAR---GYRYIALDADAAMLEVFRQKIAGV-------DRKVQVVQADARAIP--L----- 100 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTT---TCEEEEEESCHHHHHHHHHHTTTS-------CTTEEEEESCTTSCC--S-----
T ss_pred CCCCEEEEeCCcCCHHHHHHHHC---CCEEEEEECCHHHHHHHHHHhhcc-------CCceEEEEcccccCC--C-----
Confidence 47789999999999999998876 247999999999999999876221 236788888776542 1
Q ss_pred cccccCccEEEEccC
Q 012954 212 NILRSGVDAILMDLG 226 (452)
Q Consensus 212 ~l~~~~VDGILfDLG 226 (452)
....+|.|+....
T Consensus 101 --~~~~fD~v~~~~~ 113 (263)
T 2yqz_A 101 --PDESVHGVIVVHL 113 (263)
T ss_dssp --CTTCEEEEEEESC
T ss_pred --CCCCeeEEEECCc
Confidence 1236898887543
No 173
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=96.07 E-value=0.02 Score=51.43 Aligned_cols=91 Identities=15% Similarity=0.088 Sum_probs=64.4
Q ss_pred ccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEcc
Q 012954 118 PVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAK 197 (452)
Q Consensus 118 PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~ 197 (452)
..+...+...+. ++..++|.-.|.|..+..+++. ...|+|+|+++.+++.|++++...+... ....++.++..
T Consensus 18 ~~~~~~~~~~~~---~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~-~~~~~~~~~~~ 90 (235)
T 3sm3_A 18 LDLYPIIHNYLQ---EDDEILDIGCGSGKISLELASK---GYSVTGIDINSEAIRLAETAARSPGLNQ-KTGGKAEFKVE 90 (235)
T ss_dssp CCCCTTHHHHCC---TTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTTCCSCCS-SSSCEEEEEEC
T ss_pred HHHHHHHHHhCC---CCCeEEEECCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCCcc-ccCcceEEEEe
Confidence 345555555553 6789999999999999988876 2479999999999999999876543210 01126788888
Q ss_pred CcchHHHHHhhhcccccccCccEEEEc
Q 012954 198 NFRHIKSVLGQIDENILRSGVDAILMD 224 (452)
Q Consensus 198 nF~~i~~~L~~~~~~l~~~~VDGILfD 224 (452)
++..+. . ....+|.|++.
T Consensus 91 d~~~~~-----~----~~~~~D~v~~~ 108 (235)
T 3sm3_A 91 NASSLS-----F----HDSSFDFAVMQ 108 (235)
T ss_dssp CTTSCC-----S----CTTCEEEEEEE
T ss_pred cccccC-----C----CCCceeEEEEc
Confidence 876542 1 12468998875
No 174
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=96.06 E-value=0.018 Score=54.60 Aligned_cols=79 Identities=13% Similarity=0.031 Sum_probs=61.0
Q ss_pred CCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhcc
Q 012954 132 RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDE 211 (452)
Q Consensus 132 ~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~ 211 (452)
.++..++|.-.|.|..+..+....|. .+|+|+|.++.+++.|+++.+..+. .++++++++..++. ....
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~l------~~v~~~~~d~~~~~---~~~~- 147 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPE-LELVLVDATRKKVAFVERAIEVLGL------KGARALWGRAEVLA---REAG- 147 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTT-CEEEEEESCHHHHHHHHHHHHHHTC------SSEEEEECCHHHHT---TSTT-
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhCC------CceEEEECcHHHhh---cccc-
Confidence 36789999999999999988888876 4799999999999999998887653 25888998876542 1100
Q ss_pred cccccCccEEEE
Q 012954 212 NILRSGVDAILM 223 (452)
Q Consensus 212 ~l~~~~VDGILf 223 (452)
....+|.|+.
T Consensus 148 --~~~~fD~I~s 157 (249)
T 3g89_A 148 --HREAYARAVA 157 (249)
T ss_dssp --TTTCEEEEEE
T ss_pred --cCCCceEEEE
Confidence 0136999985
No 175
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=96.06 E-value=0.017 Score=52.18 Aligned_cols=89 Identities=15% Similarity=0.175 Sum_probs=64.3
Q ss_pred cccchHHHHhhccCC-CCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEE
Q 012954 117 IPVMLGEVLDVFSSS-RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTF 195 (452)
Q Consensus 117 ~PVLl~Evl~~L~~~-~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li 195 (452)
+..+.+.+.+.+... .++..++|.-.|.|.++..+++.. ..++|+|.++.+++.|++++...+. ++.++
T Consensus 20 ~~~~~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~---~~~~~~D~s~~~~~~a~~~~~~~~~-------~~~~~ 89 (246)
T 1y8c_A 20 YKKWSDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPKF---KNTWAVDLSQEMLSEAENKFRSQGL-------KPRLA 89 (246)
T ss_dssp HHHHHHHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGGS---SEEEEECSCHHHHHHHHHHHHHTTC-------CCEEE
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHCC---CcEEEEECCHHHHHHHHHHHhhcCC-------CeEEE
Confidence 334455556665421 267899999999999999998872 3699999999999999998866432 57778
Q ss_pred ccCcchHHHHHhhhcccccccCccEEEEcc
Q 012954 196 AKNFRHIKSVLGQIDENILRSGVDAILMDL 225 (452)
Q Consensus 196 ~~nF~~i~~~L~~~~~~l~~~~VDGILfDL 225 (452)
+.++..+. . ...+|.|+...
T Consensus 90 ~~d~~~~~-----~-----~~~fD~v~~~~ 109 (246)
T 1y8c_A 90 CQDISNLN-----I-----NRKFDLITCCL 109 (246)
T ss_dssp CCCGGGCC-----C-----SCCEEEEEECT
T ss_pred ecccccCC-----c-----cCCceEEEEcC
Confidence 88776531 0 13689888754
No 176
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=96.05 E-value=0.019 Score=58.26 Aligned_cols=89 Identities=12% Similarity=0.161 Sum_probs=64.0
Q ss_pred chHHHHhhcc-CCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccC
Q 012954 120 MLGEVLDVFS-SSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKN 198 (452)
Q Consensus 120 Ll~Evl~~L~-~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~n 198 (452)
|++.+.+.+. ...++..++|.-+|.|..+..+++. . ..|+|+|+++.+++.|+++++..+. .+++++++
T Consensus 219 ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~--g-~~V~gvDis~~al~~A~~n~~~~~~-------~v~~~~~D 288 (381)
T 3dmg_A 219 LLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARM--G-AEVVGVEDDLASVLSLQKGLEANAL-------KAQALHSD 288 (381)
T ss_dssp HHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHT--T-CEEEEEESBHHHHHHHHHHHHHTTC-------CCEEEECS
T ss_pred HHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHc--C-CEEEEEECCHHHHHHHHHHHHHcCC-------CeEEEEcc
Confidence 4444444442 1236789999999999999999986 2 4799999999999999998876532 36677777
Q ss_pred cchHHHHHhhhcccccccCccEEEEccCC
Q 012954 199 FRHIKSVLGQIDENILRSGVDAILMDLGM 227 (452)
Q Consensus 199 F~~i~~~L~~~~~~l~~~~VDGILfDLGv 227 (452)
..... .. ...+|.|+.|.=+
T Consensus 289 ~~~~~---~~------~~~fD~Ii~npp~ 308 (381)
T 3dmg_A 289 VDEAL---TE------EARFDIIVTNPPF 308 (381)
T ss_dssp TTTTS---CT------TCCEEEEEECCCC
T ss_pred hhhcc---cc------CCCeEEEEECCch
Confidence 65431 11 1469999987444
No 177
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=96.02 E-value=0.013 Score=53.61 Aligned_cols=85 Identities=18% Similarity=0.126 Sum_probs=62.0
Q ss_pred chHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCc
Q 012954 120 MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNF 199 (452)
Q Consensus 120 Ll~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF 199 (452)
.+.+.+..+. . +++.++|.-+|.|..+..+++ ....|+|+|+++.+++.|++++...+. ..++.+++.++
T Consensus 55 ~l~~~~~~~~-~-~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~~~~~~-----~~~v~~~~~d~ 124 (235)
T 3lcc_A 55 LIVHLVDTSS-L-PLGRALVPGCGGGHDVVAMAS---PERFVVGLDISESALAKANETYGSSPK-----AEYFSFVKEDV 124 (235)
T ss_dssp HHHHHHHTTC-S-CCEEEEEETCTTCHHHHHHCB---TTEEEEEECSCHHHHHHHHHHHTTSGG-----GGGEEEECCCT
T ss_pred HHHHHHHhcC-C-CCCCEEEeCCCCCHHHHHHHh---CCCeEEEEECCHHHHHHHHHHhhccCC-----CcceEEEECch
Confidence 4556666554 2 456999999999988888765 235799999999999999998876432 23788899888
Q ss_pred chHHHHHhhhcccccccCccEEEEc
Q 012954 200 RHIKSVLGQIDENILRSGVDAILMD 224 (452)
Q Consensus 200 ~~i~~~L~~~~~~l~~~~VDGILfD 224 (452)
..+. . ...+|.|+..
T Consensus 125 ~~~~---~-------~~~fD~v~~~ 139 (235)
T 3lcc_A 125 FTWR---P-------TELFDLIFDY 139 (235)
T ss_dssp TTCC---C-------SSCEEEEEEE
T ss_pred hcCC---C-------CCCeeEEEEC
Confidence 7532 1 1368888763
No 178
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=96.01 E-value=0.012 Score=60.12 Aligned_cols=91 Identities=11% Similarity=0.004 Sum_probs=64.0
Q ss_pred ccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCC-------------------------------------CCE
Q 012954 118 PVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPE-------------------------------------LKL 160 (452)
Q Consensus 118 PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~-------------------------------------~g~ 160 (452)
+.|...++.... ..++..++|..+|.|.-....+....+ ...
T Consensus 187 e~lAa~ll~l~~-~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~ 265 (393)
T 3k0b_A 187 ETMAAALVLLTS-WHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLN 265 (393)
T ss_dssp HHHHHHHHHHSC-CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCC
T ss_pred HHHHHHHHHHhC-CCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCce
Confidence 344455555544 467889999999999876655543221 135
Q ss_pred EEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhcccccccCccEEEEc
Q 012954 161 HIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMD 224 (452)
Q Consensus 161 VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~l~~~~VDGILfD 224 (452)
|+|+|+|+.|++.|+++++..+. ..++++++.++.++. . ...+|.|+.|
T Consensus 266 V~GvDid~~al~~Ar~Na~~~gl-----~~~I~~~~~D~~~~~----~------~~~fD~Iv~N 314 (393)
T 3k0b_A 266 IIGGDIDARLIEIAKQNAVEAGL-----GDLITFRQLQVADFQ----T------EDEYGVVVAN 314 (393)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTC-----TTCSEEEECCGGGCC----C------CCCSCEEEEC
T ss_pred EEEEECCHHHHHHHHHHHHHcCC-----CCceEEEECChHhCC----C------CCCCCEEEEC
Confidence 99999999999999999887654 235788888876531 0 1368999988
No 179
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=96.01 E-value=0.02 Score=55.20 Aligned_cols=82 Identities=11% Similarity=0.174 Sum_probs=59.7
Q ss_pred CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhccc
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDEN 212 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~ 212 (452)
++..++|.-.|.|+-+..+++..+. .+|+++|+|+.+++.|++.+....... ...++++++++... ++...
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~-~~v~~vDid~~~i~~a~~~~~~~~~~~--~~~~v~~~~~D~~~---~l~~~--- 148 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSV-ENIDICEIDETVIEVSKIYFKNISCGY--EDKRVNVFIEDASK---FLENV--- 148 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTC-CEEEEEESCHHHHHHHHHHCTTTSGGG--GSTTEEEEESCHHH---HHHHC---
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCC-CEEEEEECCHHHHHHHHHHhHHhcccc--CCCcEEEEECChHH---HHHhC---
Confidence 4579999999999999999876444 579999999999999999876431000 02378888887654 23321
Q ss_pred ccccCccEEEEcc
Q 012954 213 ILRSGVDAILMDL 225 (452)
Q Consensus 213 l~~~~VDGILfDL 225 (452)
...+|.|+.|+
T Consensus 149 --~~~fD~Ii~d~ 159 (283)
T 2i7c_A 149 --TNTYDVIIVDS 159 (283)
T ss_dssp --CSCEEEEEEEC
T ss_pred --CCCceEEEEcC
Confidence 14699999985
No 180
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=95.99 E-value=0.016 Score=56.38 Aligned_cols=82 Identities=16% Similarity=0.177 Sum_probs=59.4
Q ss_pred CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhccc
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDEN 212 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~ 212 (452)
.+..++|.-.|.|+-+..+++..+. .+|+++|+|+.+++.|++.+..+.... ...++++++++... ++...
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~-~~v~~vDid~~~~~~a~~~~~~~~~~~--~~~~v~~~~~D~~~---~l~~~--- 160 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSV-EKAILCEVDGLVIEAARKYLKQTSCGF--DDPRAEIVIANGAE---YVRKF--- 160 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTC-SEEEEEESCHHHHHHHHHHCHHHHGGG--GCTTEEEEESCHHH---HGGGC---
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCC-CEEEEEECCHHHHHHHHHHhHhhcccc--CCCceEEEECcHHH---HHhhC---
Confidence 4579999999999999999976554 579999999999999999875421000 01378888887543 33322
Q ss_pred ccccCccEEEEcc
Q 012954 213 ILRSGVDAILMDL 225 (452)
Q Consensus 213 l~~~~VDGILfDL 225 (452)
...+|.|+.|+
T Consensus 161 --~~~fD~Ii~d~ 171 (296)
T 1inl_A 161 --KNEFDVIIIDS 171 (296)
T ss_dssp --SSCEEEEEEEC
T ss_pred --CCCceEEEEcC
Confidence 23699999984
No 181
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=95.99 E-value=0.032 Score=54.02 Aligned_cols=63 Identities=5% Similarity=-0.176 Sum_probs=53.5
Q ss_pred CCccccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhh
Q 012954 114 SSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNS 180 (452)
Q Consensus 114 ~~H~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~ 180 (452)
..|.|-.+..+++.+. ..++..++|.-+|.|..+..+++. ...|+|+|.++.+++.|++++..
T Consensus 27 ~~~~~~~~~~il~~l~-l~~g~~VLDlGcGtG~~a~~La~~---g~~V~gvD~S~~ml~~Ar~~~~~ 89 (261)
T 3iv6_A 27 VAARPSDRENDIFLEN-IVPGSTVAVIGASTRFLIEKALER---GASVTVFDFSQRMCDDLAEALAD 89 (261)
T ss_dssp GGGSCCHHHHHHHTTT-CCTTCEEEEECTTCHHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTSS
T ss_pred ccccHHHHHHHHHhcC-CCCcCEEEEEeCcchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHh
Confidence 3455888999999997 568899999999999999988876 24699999999999999987643
No 182
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=95.98 E-value=0.017 Score=57.01 Aligned_cols=82 Identities=11% Similarity=0.172 Sum_probs=59.7
Q ss_pred CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhccc
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDEN 212 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~ 212 (452)
++..++|.-.|.|+-+..+++..+. .+|+++|+|+.+++.|++++..+... ....++++++++... ++...
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~-~~v~~vDis~~~l~~ar~~~~~~~~~--~~~~~v~~~~~D~~~---~l~~~--- 186 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSV-ENIDICEIDETVIEVSKIYFKNISCG--YEDKRVNVFIEDASK---FLENV--- 186 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTC-CEEEEEESCHHHHHHHHHHCTTTSGG--GGSTTEEEEESCHHH---HHHHC---
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCC-CEEEEEECCHHHHHHHHHHHHhhccc--cCCCcEEEEEccHHH---HHhhc---
Confidence 4579999999999999999875544 57999999999999999987652100 001378888887654 23221
Q ss_pred ccccCccEEEEcc
Q 012954 213 ILRSGVDAILMDL 225 (452)
Q Consensus 213 l~~~~VDGILfDL 225 (452)
...+|.|+.|.
T Consensus 187 --~~~fDvIi~d~ 197 (321)
T 2pt6_A 187 --TNTYDVIIVDS 197 (321)
T ss_dssp --CSCEEEEEEEC
T ss_pred --CCCceEEEECC
Confidence 13699999985
No 183
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=95.92 E-value=0.019 Score=56.28 Aligned_cols=83 Identities=16% Similarity=0.226 Sum_probs=59.7
Q ss_pred CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhccc
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDEN 212 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~ 212 (452)
+...++|.-.|.|+-+..+++..+. .+|+++|+|+.+++.|++.+...... .....+++++.++.... +...
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~-~~v~~vDid~~~i~~ar~~~~~~~~~-~~~~~~v~~~~~D~~~~---l~~~--- 148 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTV-EKAVMVDIDGELVEVAKRHMPEWHQG-AFDDPRAVLVIDDARAY---LERT--- 148 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTC-CEEEEEESCHHHHHHHHHHCHHHHTT-GGGCTTEEEEESCHHHH---HHHC---
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCC-CEEEEEECCHHHHHHHHHHhHhhccc-cccCCceEEEEchHHHH---HHhc---
Confidence 4579999999999999999876544 57999999999999999987542100 00013788888876542 3322
Q ss_pred ccccCccEEEEcc
Q 012954 213 ILRSGVDAILMDL 225 (452)
Q Consensus 213 l~~~~VDGILfDL 225 (452)
...+|.|+.|+
T Consensus 149 --~~~fD~Ii~d~ 159 (314)
T 1uir_A 149 --EERYDVVIIDL 159 (314)
T ss_dssp --CCCEEEEEEEC
T ss_pred --CCCccEEEECC
Confidence 24699999984
No 184
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=95.92 E-value=0.017 Score=55.56 Aligned_cols=82 Identities=15% Similarity=0.125 Sum_probs=59.8
Q ss_pred CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhccc
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDEN 212 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~ 212 (452)
....++|.-.|.|+-+..+++..+. .+|+++|+|+.+++.|++.+..+.... ...|+++++++... ++...
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~-~~v~~vEid~~~v~~ar~~~~~~~~~~--~~~rv~v~~~D~~~---~l~~~--- 145 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSV-KKATLVDIDGKVIEYSKKFLPSIAGKL--DDPRVDVQVDDGFM---HIAKS--- 145 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTC-SEEEEEESCHHHHHHHHHHCHHHHTTT--TSTTEEEEESCSHH---HHHTC---
T ss_pred CCCEEEEECCchHHHHHHHHhCCCC-ceEEEEECCHHHHHHHHHHhHhhcccc--CCCceEEEECcHHH---HHhhC---
Confidence 4579999999999999999876443 579999999999999999875431100 12478888887653 33322
Q ss_pred ccccCccEEEEcc
Q 012954 213 ILRSGVDAILMDL 225 (452)
Q Consensus 213 l~~~~VDGILfDL 225 (452)
...+|.|+.|+
T Consensus 146 --~~~fD~Ii~d~ 156 (275)
T 1iy9_A 146 --ENQYDVIMVDS 156 (275)
T ss_dssp --CSCEEEEEESC
T ss_pred --CCCeeEEEECC
Confidence 14699999974
No 185
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=95.88 E-value=0.018 Score=50.89 Aligned_cols=75 Identities=13% Similarity=0.076 Sum_probs=55.9
Q ss_pred CCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhcc
Q 012954 132 RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDE 211 (452)
Q Consensus 132 ~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~ 211 (452)
.++..++|.-.|.|..+..+++..+. .++|+|+++.+++.|++++... .++.+++.+..++. .
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~~--~v~~~D~s~~~~~~a~~~~~~~--------~~i~~~~~d~~~~~-----~-- 103 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGFP--NVTSVDYSSVVVAAMQACYAHV--------PQLRWETMDVRKLD-----F-- 103 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTCC--CEEEEESCHHHHHHHHHHTTTC--------TTCEEEECCTTSCC-----S--
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCCC--cEEEEeCCHHHHHHHHHhcccC--------CCcEEEEcchhcCC-----C--
Confidence 36789999999999999988877432 5999999999999999876531 25677777766531 1
Q ss_pred cccccCccEEEEcc
Q 012954 212 NILRSGVDAILMDL 225 (452)
Q Consensus 212 ~l~~~~VDGILfDL 225 (452)
....+|.|+.+.
T Consensus 104 --~~~~fD~v~~~~ 115 (215)
T 2pxx_A 104 --PSASFDVVLEKG 115 (215)
T ss_dssp --CSSCEEEEEEES
T ss_pred --CCCcccEEEECc
Confidence 124688888754
No 186
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=95.87 E-value=0.013 Score=65.88 Aligned_cols=95 Identities=20% Similarity=0.224 Sum_probs=69.7
Q ss_pred chHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCc
Q 012954 120 MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNF 199 (452)
Q Consensus 120 Ll~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF 199 (452)
.++.+++.|. ..++..++|.-.|.|..+..+++..++...|+|+|+++.+++.|++++.........+..++++++++.
T Consensus 709 Rle~LLelL~-~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa 787 (950)
T 3htx_A 709 RVEYALKHIR-ESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSI 787 (950)
T ss_dssp HHHHHHHHHH-HSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCT
T ss_pred HHHHHHHHhc-ccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECch
Confidence 5666777776 347889999999999888888877655467999999999999999988754211011234788999888
Q ss_pred chHHHHHhhhcccccccCccEEEEc
Q 012954 200 RHIKSVLGQIDENILRSGVDAILMD 224 (452)
Q Consensus 200 ~~i~~~L~~~~~~l~~~~VDGILfD 224 (452)
.++.. ....+|.|+..
T Consensus 788 ~dLp~---------~d~sFDlVV~~ 803 (950)
T 3htx_A 788 LEFDS---------RLHDVDIGTCL 803 (950)
T ss_dssp TSCCT---------TSCSCCEEEEE
T ss_pred HhCCc---------ccCCeeEEEEe
Confidence 76421 12469999883
No 187
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=95.86 E-value=0.024 Score=55.32 Aligned_cols=83 Identities=12% Similarity=0.137 Sum_probs=59.2
Q ss_pred CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhccc
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDEN 212 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~ 212 (452)
++..++|.-+|.|+-+..+++..+. .+|+++|+|+.+++.|++.+....... ...+++++.++...+ +....
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~-~~v~~vDid~~~i~~a~~~~~~~~~~~--~~~~v~~~~~D~~~~---~~~~~-- 166 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGTV-EHCDLVDIDGEVMEQSKQHFPQISRSL--ADPRATVRVGDGLAF---VRQTP-- 166 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTTC-CEEEEEESCHHHHHHHHHHCHHHHGGG--GCTTEEEEESCHHHH---HHSSC--
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCCC-CEEEEEECCHHHHHHHHHHhHHhhccc--CCCcEEEEECcHHHH---HHhcc--
Confidence 5679999999999999999976444 579999999999999998774321000 023788888876543 32210
Q ss_pred ccccCccEEEEcc
Q 012954 213 ILRSGVDAILMDL 225 (452)
Q Consensus 213 l~~~~VDGILfDL 225 (452)
...+|.|+.|.
T Consensus 167 --~~~fDvIi~d~ 177 (304)
T 3bwc_A 167 --DNTYDVVIIDT 177 (304)
T ss_dssp --TTCEEEEEEEC
T ss_pred --CCceeEEEECC
Confidence 23699999963
No 188
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=95.85 E-value=0.022 Score=54.51 Aligned_cols=70 Identities=13% Similarity=-0.014 Sum_probs=52.7
Q ss_pred hHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCc
Q 012954 121 LGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNF 199 (452)
Q Consensus 121 l~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF 199 (452)
|+.+.+++ .++..++|.-.|.|-=+.+++.. .+..+|+|+|+|+.|++.|+++++.++. ..++++++++-
T Consensus 12 L~~i~~~v---~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~AvDi~~~al~~A~~N~~~~gl-----~~~I~~~~gD~ 81 (230)
T 3lec_A 12 LQKVANYV---PKGARLLDVGSDHAYLPIFLLQM-GYCDFAIAGEVVNGPYQSALKNVSEHGL-----TSKIDVRLANG 81 (230)
T ss_dssp HHHHHTTS---CTTEEEEEETCSTTHHHHHHHHT-TCEEEEEEEESSHHHHHHHHHHHHHTTC-----TTTEEEEECSG
T ss_pred HHHHHHhC---CCCCEEEEECCchHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCC-----CCcEEEEECch
Confidence 44444444 36789999999999666655554 4445799999999999999999988764 34788888764
No 189
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=95.84 E-value=0.016 Score=59.02 Aligned_cols=90 Identities=13% Similarity=0.028 Sum_probs=63.7
Q ss_pred cchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCC-------------------------------------CCEE
Q 012954 119 VMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPE-------------------------------------LKLH 161 (452)
Q Consensus 119 VLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~-------------------------------------~g~V 161 (452)
.|...++.... ..++..++|..+|.|+-....+....+ ...+
T Consensus 181 ~LAaall~l~~-~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v 259 (384)
T 3ldg_A 181 NMAAAIILLSN-WFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDI 259 (384)
T ss_dssp HHHHHHHHHTT-CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCE
T ss_pred HHHHHHHHHhC-CCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceE
Confidence 34444444443 467889999999999776655543221 1359
Q ss_pred EEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhcccccccCccEEEEc
Q 012954 162 IGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMD 224 (452)
Q Consensus 162 igfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~l~~~~VDGILfD 224 (452)
+|+|+|+.|++.|+++++..+. ..++++++.++.++. . ...+|.|+.|
T Consensus 260 ~GvDid~~al~~Ar~Na~~~gl-----~~~I~~~~~D~~~l~----~------~~~fD~Iv~N 307 (384)
T 3ldg_A 260 SGFDFDGRMVEIARKNAREVGL-----EDVVKLKQMRLQDFK----T------NKINGVLISN 307 (384)
T ss_dssp EEEESCHHHHHHHHHHHHHTTC-----TTTEEEEECCGGGCC----C------CCCSCEEEEC
T ss_pred EEEECCHHHHHHHHHHHHHcCC-----CCceEEEECChHHCC----c------cCCcCEEEEC
Confidence 9999999999999999887654 236888888887642 0 1368889987
No 190
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=95.84 E-value=0.025 Score=56.40 Aligned_cols=81 Identities=10% Similarity=0.059 Sum_probs=59.8
Q ss_pred CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhh--ccCCCCCCceEEEEccCcchHHHHHhhhc
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSL--LHGQAHPHLKTHTFAKNFRHIKSVLGQID 210 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~--~~~~~~~~~r~~li~~nF~~i~~~L~~~~ 210 (452)
....++|.-.|.|+-+..+++..+. .+|+++|+|+.+++.|++++..+ +.. ..++++++++... ++....
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~~-~~V~~VDis~~~l~~Ar~~~~~~~~gl~----~~rv~~~~~D~~~---~l~~~~ 191 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHASI-EQIDMCEIDKMVVDVSKQFFPDVAIGYE----DPRVNLVIGDGVA---FLKNAA 191 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTC-CEEEEEESCHHHHHHHHHHCHHHHGGGG----STTEEEEESCHHH---HHHTSC
T ss_pred CCCEEEEECCCccHHHHHHHHcCCC-CEEEEEECCHHHHHHHHHHHHhhccccC----CCcEEEEECCHHH---HHHhcc
Confidence 4579999999999999998876544 57999999999999999987643 110 1378888887653 333221
Q ss_pred ccccccCccEEEEcc
Q 012954 211 ENILRSGVDAILMDL 225 (452)
Q Consensus 211 ~~l~~~~VDGILfDL 225 (452)
...+|.|+.|.
T Consensus 192 ----~~~fDlIi~d~ 202 (334)
T 1xj5_A 192 ----EGSYDAVIVDS 202 (334)
T ss_dssp ----TTCEEEEEECC
T ss_pred ----CCCccEEEECC
Confidence 13699999975
No 191
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=95.83 E-value=0.0035 Score=58.88 Aligned_cols=78 Identities=12% Similarity=0.052 Sum_probs=55.8
Q ss_pred CCCEEEEEccCCChhHHHHHHh---CCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhh
Q 012954 133 TITSFVDCTLGAAGHSSAIIRA---HPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQI 209 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~---~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~ 209 (452)
++..++|.-.|.|+.|..+++. +.+.++|+|+|+++.+++.|+. .. .++++++++..++.. +...
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~----~~-------~~v~~~~gD~~~~~~-l~~~ 148 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS----DM-------ENITLHQGDCSDLTT-FEHL 148 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG----GC-------TTEEEEECCSSCSGG-GGGG
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc----cC-------CceEEEECcchhHHH-HHhh
Confidence 4579999999999999988876 4445789999999999987761 11 268888888765311 1211
Q ss_pred cccccccCccEEEEccC
Q 012954 210 DENILRSGVDAILMDLG 226 (452)
Q Consensus 210 ~~~l~~~~VDGILfDLG 226 (452)
. ...+|.|++|.+
T Consensus 149 ~----~~~fD~I~~d~~ 161 (236)
T 2bm8_A 149 R----EMAHPLIFIDNA 161 (236)
T ss_dssp S----SSCSSEEEEESS
T ss_pred c----cCCCCEEEECCc
Confidence 1 125899997654
No 192
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=95.82 E-value=0.029 Score=55.21 Aligned_cols=80 Identities=21% Similarity=0.266 Sum_probs=60.7
Q ss_pred hHHHHhhccCCCCCCEEEEEccCC--ChhHHHHHHh-CCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEcc
Q 012954 121 LGEVLDVFSSSRTITSFVDCTLGA--AGHSSAIIRA-HPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAK 197 (452)
Q Consensus 121 l~Evl~~L~~~~~ggiyVDaTlG~--GGHS~aIL~~-~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~ 197 (452)
+..++.+|........++|.=+|. +|.+..+++. .|+ .+|+++|.||.+|+.|+++|.... ..++.+++.
T Consensus 66 l~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~P~-arVv~VD~sp~mLa~Ar~~l~~~~------~~~~~~v~a 138 (277)
T 3giw_A 66 MNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVAPE-SRVVYVDNDPIVLTLSQGLLASTP------EGRTAYVEA 138 (277)
T ss_dssp HHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHCTT-CEEEEEECCHHHHHTTHHHHCCCS------SSEEEEEEC
T ss_pred HHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHCCC-CEEEEEeCChHHHHHHHHHhccCC------CCcEEEEEe
Confidence 444566664211336899999887 7899999887 465 689999999999999999886532 237899999
Q ss_pred CcchHHHHHh
Q 012954 198 NFRHIKSVLG 207 (452)
Q Consensus 198 nF~~i~~~L~ 207 (452)
++.+...++.
T Consensus 139 D~~~~~~~l~ 148 (277)
T 3giw_A 139 DMLDPASILD 148 (277)
T ss_dssp CTTCHHHHHT
T ss_pred cccChhhhhc
Confidence 9999876654
No 193
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=95.80 E-value=0.025 Score=51.38 Aligned_cols=82 Identities=11% Similarity=0.112 Sum_probs=60.5
Q ss_pred cchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccC
Q 012954 119 VMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKN 198 (452)
Q Consensus 119 VLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~n 198 (452)
.++..+.+.+. ++..++|.-.|.|..+..+++. ...|+|+|.++.+++.|+++.. ..++++++.+
T Consensus 42 ~~~~~l~~~~~---~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~---------~~~~~~~~~d 106 (242)
T 3l8d_A 42 TIIPFFEQYVK---KEAEVLDVGCGDGYGTYKLSRT---GYKAVGVDISEVMIQKGKERGE---------GPDLSFIKGD 106 (242)
T ss_dssp THHHHHHHHSC---TTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHTTTC---------BTTEEEEECB
T ss_pred HHHHHHHHHcC---CCCeEEEEcCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhcc---------cCCceEEEcc
Confidence 45555555553 6789999999999999988886 2469999999999999987641 1367888888
Q ss_pred cchHHHHHhhhcccccccCccEEEEc
Q 012954 199 FRHIKSVLGQIDENILRSGVDAILMD 224 (452)
Q Consensus 199 F~~i~~~L~~~~~~l~~~~VDGILfD 224 (452)
+.++. + ....+|.|+..
T Consensus 107 ~~~~~--~-------~~~~fD~v~~~ 123 (242)
T 3l8d_A 107 LSSLP--F-------ENEQFEAIMAI 123 (242)
T ss_dssp TTBCS--S-------CTTCEEEEEEE
T ss_pred hhcCC--C-------CCCCccEEEEc
Confidence 76542 1 12468988874
No 194
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=95.78 E-value=0.0076 Score=56.23 Aligned_cols=77 Identities=9% Similarity=0.032 Sum_probs=55.0
Q ss_pred cccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHH-HH---HHHHHhhhccCCCCCCceE
Q 012954 117 IPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSAL-AK---ARAHLNSLLHGQAHPHLKT 192 (452)
Q Consensus 117 ~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai-~~---Ak~rL~~~~~~~~~~~~r~ 192 (452)
+|--..|+++.+. .++..++|.-+|.|..+..+.+..+. ..|+|+|.++.++ +. |+++.+..+. .++
T Consensus 10 ~~~~~~~~~~~~~--~~~~~vLDiGCG~G~~~~~la~~~~~-~~v~GvD~s~~~ml~~A~~A~~~~~~~~~------~~v 80 (225)
T 3p2e_A 10 VDLSKDELTEIIG--QFDRVHIDLGTGDGRNIYKLAINDQN-TFYIGIDPVKENLFDISKKIIKKPSKGGL------SNV 80 (225)
T ss_dssp ECCCHHHHHHHHT--TCSEEEEEETCTTSHHHHHHHHTCTT-EEEEEECSCCGGGHHHHHHHTSCGGGTCC------SSE
T ss_pred ccCCHHHHHHHhC--CCCCEEEEEeccCcHHHHHHHHhCCC-CEEEEEeCCHHHHHHHHHHHHHHHHHcCC------CCe
Confidence 4455677777775 57889999999999999998876665 5799999995554 44 4666554322 256
Q ss_pred EEEccCcchH
Q 012954 193 HTFAKNFRHI 202 (452)
Q Consensus 193 ~li~~nF~~i 202 (452)
.+++++...+
T Consensus 81 ~~~~~d~~~l 90 (225)
T 3p2e_A 81 VFVIAAAESL 90 (225)
T ss_dssp EEECCBTTBC
T ss_pred EEEEcCHHHh
Confidence 7777776654
No 195
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=95.78 E-value=0.016 Score=52.21 Aligned_cols=83 Identities=12% Similarity=0.081 Sum_probs=59.8
Q ss_pred chHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCc
Q 012954 120 MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNF 199 (452)
Q Consensus 120 Ll~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF 199 (452)
+.+.+++.+....++..++|.-.|.|..+..+++..+ .|+|+|.++.+++.|++++.. ++.++++++
T Consensus 29 ~~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~----------~v~~~~~d~ 95 (250)
T 2p7i_A 29 MHPFMVRAFTPFFRPGNLLELGSFKGDFTSRLQEHFN---DITCVEASEEAISHAQGRLKD----------GITYIHSRF 95 (250)
T ss_dssp HHHHHHHHHGGGCCSSCEEEESCTTSHHHHHHTTTCS---CEEEEESCHHHHHHHHHHSCS----------CEEEEESCG
T ss_pred HHHHHHHHHHhhcCCCcEEEECCCCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhhhC----------CeEEEEccH
Confidence 3455566664223667899999999999888887644 489999999999999886532 467777777
Q ss_pred chHHHHHhhhcccccccCccEEEEcc
Q 012954 200 RHIKSVLGQIDENILRSGVDAILMDL 225 (452)
Q Consensus 200 ~~i~~~L~~~~~~l~~~~VDGILfDL 225 (452)
.++ .. ...+|.|+...
T Consensus 96 ~~~---~~-------~~~fD~v~~~~ 111 (250)
T 2p7i_A 96 EDA---QL-------PRRYDNIVLTH 111 (250)
T ss_dssp GGC---CC-------SSCEEEEEEES
T ss_pred HHc---Cc-------CCcccEEEEhh
Confidence 654 11 23688888754
No 196
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=95.76 E-value=0.026 Score=54.27 Aligned_cols=81 Identities=15% Similarity=0.185 Sum_probs=58.0
Q ss_pred CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCC-----CCCCceEEEEccCcchHHHHHh
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQ-----AHPHLKTHTFAKNFRHIKSVLG 207 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~-----~~~~~r~~li~~nF~~i~~~L~ 207 (452)
++..++|.-.|.|+-+..+++. +. .+|+++|+|+.+++.|++.+ ...... +....+++++.++... ++.
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~-~~-~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~---~l~ 148 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQH-DV-DEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFE---FIK 148 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTS-CC-SEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHH---HHH
T ss_pred CCCeEEEEcCCcCHHHHHHHhC-CC-CEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHH---Hhc
Confidence 4579999999999999999987 54 57999999999999999987 331000 0002378888876543 333
Q ss_pred hhcccccccCccEEEEcc
Q 012954 208 QIDENILRSGVDAILMDL 225 (452)
Q Consensus 208 ~~~~~l~~~~VDGILfDL 225 (452)
. . ..+|.|+.|+
T Consensus 149 ~-~-----~~fD~Ii~d~ 160 (281)
T 1mjf_A 149 N-N-----RGFDVIIADS 160 (281)
T ss_dssp H-C-----CCEEEEEEEC
T ss_pred c-c-----CCeeEEEECC
Confidence 2 1 3699999884
No 197
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=95.76 E-value=0.025 Score=53.84 Aligned_cols=61 Identities=13% Similarity=-0.009 Sum_probs=48.9
Q ss_pred CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCc
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNF 199 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF 199 (452)
++..++|.-.|.|-=+.+++...+ .++|+|+|+|+.|++.|+++++.++. .+++++++++-
T Consensus 15 ~g~~VlDIGtGsG~l~i~la~~~~-~~~V~avDi~~~al~~A~~N~~~~gl-----~~~i~~~~~d~ 75 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELVERGQ-IKSAIAGEVVEGPYQSAVKNVEAHGL-----KEKIQVRLANG 75 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTS-EEEEEEEESSHHHHHHHHHHHHHTTC-----TTTEEEEECSG
T ss_pred CCCEEEEeCCCcHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCC-----CceEEEEECch
Confidence 678999999999966666665444 45799999999999999999988764 24688888764
No 198
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=95.74 E-value=0.036 Score=54.84 Aligned_cols=86 Identities=15% Similarity=0.054 Sum_probs=63.6
Q ss_pred HHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcch
Q 012954 122 GEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRH 201 (452)
Q Consensus 122 ~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~ 201 (452)
+.+.+.+. ..++..++|.-.|.|..+..+++. +. .+|+|+|.++ +++.|+++++..+. ..++++++++..+
T Consensus 54 ~~i~~~~~-~~~~~~VLDiGcGtG~ls~~la~~-g~-~~v~gvD~s~-~~~~a~~~~~~~~~-----~~~i~~~~~d~~~ 124 (340)
T 2fyt_A 54 DFIYQNPH-IFKDKVVLDVGCGTGILSMFAAKA-GA-KKVLGVDQSE-ILYQAMDIIRLNKL-----EDTITLIKGKIEE 124 (340)
T ss_dssp HHHHHCGG-GTTTCEEEEETCTTSHHHHHHHHT-TC-SEEEEEESST-HHHHHHHHHHHTTC-----TTTEEEEESCTTT
T ss_pred HHHHhhhh-hcCCCEEEEeeccCcHHHHHHHHc-CC-CEEEEEChHH-HHHHHHHHHHHcCC-----CCcEEEEEeeHHH
Confidence 44455554 357889999999999988888775 43 4799999997 89999998876543 1378888888775
Q ss_pred HHHHHhhhcccccccCccEEEEcc
Q 012954 202 IKSVLGQIDENILRSGVDAILMDL 225 (452)
Q Consensus 202 i~~~L~~~~~~l~~~~VDGILfDL 225 (452)
+. . ....+|.|+.+.
T Consensus 125 ~~-----~----~~~~~D~Ivs~~ 139 (340)
T 2fyt_A 125 VH-----L----PVEKVDVIISEW 139 (340)
T ss_dssp SC-----C----SCSCEEEEEECC
T ss_pred hc-----C----CCCcEEEEEEcC
Confidence 41 1 124699999875
No 199
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=95.72 E-value=0.026 Score=48.84 Aligned_cols=78 Identities=13% Similarity=0.214 Sum_probs=57.3
Q ss_pred HHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcch
Q 012954 122 GEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRH 201 (452)
Q Consensus 122 ~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~ 201 (452)
.++++.+. .++..++|.-.|.|..+..+++. ...++|+|.++.+++.+++++. ++.+++.++..
T Consensus 37 ~~~l~~~~--~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~~~~~~~~a~~~~~-----------~~~~~~~d~~~ 100 (195)
T 3cgg_A 37 ARLIDAMA--PRGAKILDAGCGQGRIGGYLSKQ---GHDVLGTDLDPILIDYAKQDFP-----------EARWVVGDLSV 100 (195)
T ss_dssp HHHHHHHS--CTTCEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHCT-----------TSEEEECCTTT
T ss_pred HHHHHHhc--cCCCeEEEECCCCCHHHHHHHHC---CCcEEEEcCCHHHHHHHHHhCC-----------CCcEEEccccc
Confidence 45666663 47889999999999999988876 2479999999999999988652 34566777654
Q ss_pred HHHHHhhhcccccccCccEEEEc
Q 012954 202 IKSVLGQIDENILRSGVDAILMD 224 (452)
Q Consensus 202 i~~~L~~~~~~l~~~~VDGILfD 224 (452)
+. + ....+|.|+.+
T Consensus 101 ~~--~-------~~~~~D~i~~~ 114 (195)
T 3cgg_A 101 DQ--I-------SETDFDLIVSA 114 (195)
T ss_dssp SC--C-------CCCCEEEEEEC
T ss_pred CC--C-------CCCceeEEEEC
Confidence 31 1 12468888875
No 200
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=95.71 E-value=0.028 Score=55.28 Aligned_cols=74 Identities=15% Similarity=0.174 Sum_probs=60.9
Q ss_pred chHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCc
Q 012954 120 MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNF 199 (452)
Q Consensus 120 Ll~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF 199 (452)
...++++.+. ..++..++|.-.|.|..+..+++.+|.. +++++|+ +.+++.|+++++..+. ..+++++..++
T Consensus 178 ~~~~l~~~~~-~~~~~~vLDvG~G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~~~~~~~~~-----~~~v~~~~~d~ 249 (359)
T 1x19_A 178 AIQLLLEEAK-LDGVKKMIDVGGGIGDISAAMLKHFPEL-DSTILNL-PGAIDLVNENAAEKGV-----ADRMRGIAVDI 249 (359)
T ss_dssp HHHHHHHHCC-CTTCCEEEEESCTTCHHHHHHHHHCTTC-EEEEEEC-GGGHHHHHHHHHHTTC-----TTTEEEEECCT
T ss_pred hHHHHHHhcC-CCCCCEEEEECCcccHHHHHHHHHCCCC-eEEEEec-HHHHHHHHHHHHhcCC-----CCCEEEEeCcc
Confidence 4567888875 4577899999999999999999998864 6999999 9999999998876543 23688888887
Q ss_pred ch
Q 012954 200 RH 201 (452)
Q Consensus 200 ~~ 201 (452)
..
T Consensus 250 ~~ 251 (359)
T 1x19_A 250 YK 251 (359)
T ss_dssp TT
T ss_pred cc
Confidence 64
No 201
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=95.70 E-value=0.033 Score=54.59 Aligned_cols=80 Identities=11% Similarity=0.115 Sum_probs=59.3
Q ss_pred CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhh--ccCCCCCCceEEEEccCcchHHHHHhhhc
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSL--LHGQAHPHLKTHTFAKNFRHIKSVLGQID 210 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~--~~~~~~~~~r~~li~~nF~~i~~~L~~~~ 210 (452)
++..++|.-.|.|+-+..+++..+. .+|+++|+|+.+++.|++.+... +.. ..++++++++... ++...
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~-~~v~~vDid~~~i~~ar~~~~~~~~~~~----~~rv~v~~~Da~~---~l~~~- 165 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHPSV-ESVVQCEIDEDVIQVSKKFLPGMAIGYS----SSKLTLHVGDGFE---FMKQN- 165 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTC-CEEEEEESCHHHHHHHHHHCHHHHGGGG----CTTEEEEESCHHH---HHHTC-
T ss_pred CCCEEEEECCCchHHHHHHHHcCCC-CEEEEEECCHHHHHHHHHHhHHhhcccC----CCcEEEEECcHHH---HHhhC-
Confidence 4579999999999999999876544 57999999999999999987542 110 1378888776543 33322
Q ss_pred ccccccCccEEEEcc
Q 012954 211 ENILRSGVDAILMDL 225 (452)
Q Consensus 211 ~~l~~~~VDGILfDL 225 (452)
...+|.|+.|+
T Consensus 166 ----~~~fD~Ii~d~ 176 (304)
T 2o07_A 166 ----QDAFDVIITDS 176 (304)
T ss_dssp ----SSCEEEEEEEC
T ss_pred ----CCCceEEEECC
Confidence 24699999974
No 202
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=95.70 E-value=0.043 Score=53.84 Aligned_cols=74 Identities=16% Similarity=0.171 Sum_probs=60.7
Q ss_pred cchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccC
Q 012954 119 VMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKN 198 (452)
Q Consensus 119 VLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~n 198 (452)
....++++.+. ..++..++|.-.|.|..+..+++.+|.. +++++|+ +.+++.|++++...+. ..+++++..+
T Consensus 169 ~~~~~~~~~~~-~~~~~~vlDvG~G~G~~~~~l~~~~~~~-~~~~~D~-~~~~~~a~~~~~~~~~-----~~~v~~~~~d 240 (374)
T 1qzz_A 169 LAYEAPADAYD-WSAVRHVLDVGGGNGGMLAAIALRAPHL-RGTLVEL-AGPAERARRRFADAGL-----ADRVTVAEGD 240 (374)
T ss_dssp TTTHHHHHTSC-CTTCCEEEEETCTTSHHHHHHHHHCTTC-EEEEEEC-HHHHHHHHHHHHHTTC-----TTTEEEEECC
T ss_pred hHHHHHHHhCC-CCCCCEEEEECCCcCHHHHHHHHHCCCC-EEEEEeC-HHHHHHHHHHHHhcCC-----CCceEEEeCC
Confidence 35678888875 4578899999999999999999998764 6999999 9999999998876543 2368888888
Q ss_pred cc
Q 012954 199 FR 200 (452)
Q Consensus 199 F~ 200 (452)
+.
T Consensus 241 ~~ 242 (374)
T 1qzz_A 241 FF 242 (374)
T ss_dssp TT
T ss_pred CC
Confidence 74
No 203
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=95.68 E-value=0.012 Score=55.13 Aligned_cols=88 Identities=15% Similarity=0.170 Sum_probs=65.6
Q ss_pred CccccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEE
Q 012954 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHT 194 (452)
Q Consensus 115 ~H~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~l 194 (452)
...|-+.+.+++.+. ..++..++|.-.|.|..+..+.+ +. ..|+|+|.++.+++.|+++. ++.+
T Consensus 17 ~~~~~~~~~l~~~~~-~~~~~~vLDiGcG~G~~~~~l~~--~~-~~v~gvD~s~~~~~~a~~~~------------~~~~ 80 (261)
T 3ege_A 17 VPDIRIVNAIINLLN-LPKGSVIADIGAGTGGYSVALAN--QG-LFVYAVEPSIVMRQQAVVHP------------QVEW 80 (261)
T ss_dssp CCCHHHHHHHHHHHC-CCTTCEEEEETCTTSHHHHHHHT--TT-CEEEEECSCHHHHHSSCCCT------------TEEE
T ss_pred cccHHHHHHHHHHhC-CCCCCEEEEEcCcccHHHHHHHh--CC-CEEEEEeCCHHHHHHHHhcc------------CCEE
Confidence 355668888888886 45789999999999999998886 33 57999999999988765421 5677
Q ss_pred EccCcchHHHHHhhhcccccccCccEEEEccCC
Q 012954 195 FAKNFRHIKSVLGQIDENILRSGVDAILMDLGM 227 (452)
Q Consensus 195 i~~nF~~i~~~L~~~~~~l~~~~VDGILfDLGv 227 (452)
+++++..+. + ....+|.|+....+
T Consensus 81 ~~~d~~~~~--~-------~~~~fD~v~~~~~l 104 (261)
T 3ege_A 81 FTGYAENLA--L-------PDKSVDGVISILAI 104 (261)
T ss_dssp ECCCTTSCC--S-------CTTCBSEEEEESCG
T ss_pred EECchhhCC--C-------CCCCEeEEEEcchH
Confidence 788776532 1 12468988887554
No 204
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=95.68 E-value=0.027 Score=54.38 Aligned_cols=70 Identities=13% Similarity=0.016 Sum_probs=52.1
Q ss_pred hHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCc
Q 012954 121 LGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNF 199 (452)
Q Consensus 121 l~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF 199 (452)
|+.+.+++ .++..++|.-.|.|-=+.+++.. .+..+|+|+|+|+.|++.|+++++.++. .+++++++++-
T Consensus 12 L~~i~~~v---~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~avDi~~~al~~A~~N~~~~gl-----~~~I~v~~gD~ 81 (244)
T 3gnl_A 12 LEKVASYI---TKNERIADIGSDHAYLPCFAVKN-QTASFAIAGEVVDGPFQSAQKQVRSSGL-----TEQIDVRKGNG 81 (244)
T ss_dssp HHHHHTTC---CSSEEEEEETCSTTHHHHHHHHT-TSEEEEEEEESSHHHHHHHHHHHHHTTC-----TTTEEEEECSG
T ss_pred HHHHHHhC---CCCCEEEEECCccHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCC-----CceEEEEecch
Confidence 44444444 36789999999999555555544 4445799999999999999999988754 24688888763
No 205
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=95.67 E-value=0.032 Score=55.15 Aligned_cols=80 Identities=15% Similarity=0.156 Sum_probs=59.6
Q ss_pred CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhh--ccCCCCCCceEEEEccCcchHHHHHhhhc
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSL--LHGQAHPHLKTHTFAKNFRHIKSVLGQID 210 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~--~~~~~~~~~r~~li~~nF~~i~~~L~~~~ 210 (452)
+...++|.-.|.|+-+..+++..+. .+|+++|+|+.+++.|++.+..+ +.. ..++++++++... ++...
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~-~~v~~vDid~~~i~~Ar~~~~~~~~~~~----~~rv~~~~~D~~~---~l~~~- 178 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESV-EKVTMCEIDEMVIDVAKKFLPGMSCGFS----HPKLDLFCGDGFE---FLKNH- 178 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTC-CEEEEECSCHHHHHHHHHHCTTTSGGGG----CTTEEEECSCHHH---HHHHC-
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCC-CEEEEEECCHHHHHHHHHHHHHhccccC----CCCEEEEEChHHH---HHHhc-
Confidence 4579999999999999999876544 57999999999999999987643 110 2378888887654 23321
Q ss_pred ccccccCccEEEEcc
Q 012954 211 ENILRSGVDAILMDL 225 (452)
Q Consensus 211 ~~l~~~~VDGILfDL 225 (452)
...+|.|+.|.
T Consensus 179 ----~~~fD~Ii~d~ 189 (314)
T 2b2c_A 179 ----KNEFDVIITDS 189 (314)
T ss_dssp ----TTCEEEEEECC
T ss_pred ----CCCceEEEEcC
Confidence 23699999875
No 206
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=95.65 E-value=0.03 Score=61.26 Aligned_cols=80 Identities=13% Similarity=-0.001 Sum_probs=60.5
Q ss_pred CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhccc
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDEN 212 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~ 212 (452)
++..++|+-.|.|+-|..++.. ...+|+++|+++.|++.|+++++..+.. ..++++++++... ++...
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~--ga~~V~aVD~s~~al~~a~~N~~~ngl~----~~~v~~i~~D~~~---~l~~~--- 606 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLG--GARSTTTVDMSRTYLEWAERNLRLNGLT----GRAHRLIQADCLA---WLREA--- 606 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCC----STTEEEEESCHHH---HHHHC---
T ss_pred CCCcEEEeeechhHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHHHHcCCC----ccceEEEecCHHH---HHHhc---
Confidence 6789999999999999998874 2346999999999999999988765431 1368888887544 33322
Q ss_pred ccccCccEEEEccC
Q 012954 213 ILRSGVDAILMDLG 226 (452)
Q Consensus 213 l~~~~VDGILfDLG 226 (452)
...+|.|++|-=
T Consensus 607 --~~~fD~Ii~DPP 618 (703)
T 3v97_A 607 --NEQFDLIFIDPP 618 (703)
T ss_dssp --CCCEEEEEECCC
T ss_pred --CCCccEEEECCc
Confidence 136999998753
No 207
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=95.65 E-value=0.035 Score=52.38 Aligned_cols=84 Identities=19% Similarity=0.192 Sum_probs=60.2
Q ss_pred chHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCc
Q 012954 120 MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNF 199 (452)
Q Consensus 120 Ll~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF 199 (452)
+.-+.++.+. .++..++|.-.|.|..+.++++. +. +|+|+|+|+.+++.|+++....+. .++++++++
T Consensus 109 ~~~~~l~~~~--~~~~~VLDiGcG~G~l~~~la~~-g~--~v~gvDi~~~~v~~a~~n~~~~~~-------~v~~~~~d~ 176 (254)
T 2nxc_A 109 LALKALARHL--RPGDKVLDLGTGSGVLAIAAEKL-GG--KALGVDIDPMVLPQAEANAKRNGV-------RPRFLEGSL 176 (254)
T ss_dssp HHHHHHHHHC--CTTCEEEEETCTTSHHHHHHHHT-TC--EEEEEESCGGGHHHHHHHHHHTTC-------CCEEEESCH
T ss_pred HHHHHHHHhc--CCCCEEEEecCCCcHHHHHHHHh-CC--eEEEEECCHHHHHHHHHHHHHcCC-------cEEEEECCh
Confidence 4445555442 47889999999999888887764 33 699999999999999998776432 266777766
Q ss_pred chHHHHHhhhcccccccCccEEEEcc
Q 012954 200 RHIKSVLGQIDENILRSGVDAILMDL 225 (452)
Q Consensus 200 ~~i~~~L~~~~~~l~~~~VDGILfDL 225 (452)
... +. ...+|.|+.+.
T Consensus 177 ~~~---~~-------~~~fD~Vv~n~ 192 (254)
T 2nxc_A 177 EAA---LP-------FGPFDLLVANL 192 (254)
T ss_dssp HHH---GG-------GCCEEEEEEEC
T ss_pred hhc---Cc-------CCCCCEEEECC
Confidence 542 22 13699999874
No 208
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=95.57 E-value=0.041 Score=52.93 Aligned_cols=85 Identities=16% Similarity=0.145 Sum_probs=65.5
Q ss_pred hHHHHhhccCC--CCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccC
Q 012954 121 LGEVLDVFSSS--RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKN 198 (452)
Q Consensus 121 l~Evl~~L~~~--~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~n 198 (452)
..++++.+. . .++..++|.-.|.|..+..+++.+|.. +++++|++ .+++.|++++...+. ..+++++..+
T Consensus 152 ~~~~~~~~~-~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~-~~~~~D~~-~~~~~a~~~~~~~~~-----~~~v~~~~~d 223 (335)
T 2r3s_A 152 AQLIAQLVN-ENKIEPLKVLDISASHGLFGIAVAQHNPNA-EIFGVDWA-SVLEVAKENARIQGV-----ASRYHTIAGS 223 (335)
T ss_dssp HHHHHHHHT-C--CCCSEEEEETCTTCHHHHHHHHHCTTC-EEEEEECH-HHHHHHHHHHHHHTC-----GGGEEEEESC
T ss_pred HHHHHHhcc-cccCCCCEEEEECCCcCHHHHHHHHHCCCC-eEEEEecH-HHHHHHHHHHHhcCC-----CcceEEEecc
Confidence 456777774 3 467899999999999999999998764 79999999 999999998876543 2368888888
Q ss_pred cchHHHHHhhhcccccccCccEEEE
Q 012954 199 FRHIKSVLGQIDENILRSGVDAILM 223 (452)
Q Consensus 199 F~~i~~~L~~~~~~l~~~~VDGILf 223 (452)
+... .. ..++|.|++
T Consensus 224 ~~~~-----~~-----~~~~D~v~~ 238 (335)
T 2r3s_A 224 AFEV-----DY-----GNDYDLVLL 238 (335)
T ss_dssp TTTS-----CC-----CSCEEEEEE
T ss_pred cccC-----CC-----CCCCcEEEE
Confidence 7642 11 124888887
No 209
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=95.55 E-value=0.038 Score=52.01 Aligned_cols=98 Identities=14% Similarity=0.069 Sum_probs=68.8
Q ss_pred CCccccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEE
Q 012954 114 SSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTH 193 (452)
Q Consensus 114 ~~H~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~ 193 (452)
..+...+.+.+++.+. ..++..++|.-.|.|.++..+++.. ..|+|+|+++.+++.|++++...... ....++.
T Consensus 39 ~~~~~~~~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~--~~~~~~~ 112 (293)
T 3thr_A 39 RSRTAEYKAWLLGLLR-QHGCHRVLDVACGTGVDSIMLVEEG---FSVTSVDASDKMLKYALKERWNRRKE--PAFDKWV 112 (293)
T ss_dssp SCBCHHHHHHHHHHHH-HTTCCEEEETTCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTTS--HHHHTCE
T ss_pred cchHHHHHHHHHHHhc-ccCCCEEEEecCCCCHHHHHHHHCC---CeEEEEECCHHHHHHHHHhhhhcccc--cccceee
Confidence 3455666677777775 3577899999999999999998862 26999999999999998876332110 0012567
Q ss_pred EEccCcchHHHHHhhhcccccccCccEEEE
Q 012954 194 TFAKNFRHIKSVLGQIDENILRSGVDAILM 223 (452)
Q Consensus 194 li~~nF~~i~~~L~~~~~~l~~~~VDGILf 223 (452)
+..+++..+..-+. ....+|.|+.
T Consensus 113 ~~~~d~~~~~~~~~------~~~~fD~V~~ 136 (293)
T 3thr_A 113 IEEANWLTLDKDVP------AGDGFDAVIC 136 (293)
T ss_dssp EEECCGGGHHHHSC------CTTCEEEEEE
T ss_pred EeecChhhCccccc------cCCCeEEEEE
Confidence 78888877653221 1246998887
No 210
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=95.53 E-value=0.036 Score=57.08 Aligned_cols=81 Identities=15% Similarity=0.101 Sum_probs=61.3
Q ss_pred cchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccC
Q 012954 119 VMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKN 198 (452)
Q Consensus 119 VLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~n 198 (452)
.|++.+++ + .++..++|.-.|.|..+..+++. ...|+|+|.+++|++.|+++++..+. . +++++++
T Consensus 280 ~l~~~~~~-~---~~~~~VLDlgcG~G~~sl~la~~---~~~V~gvD~s~~ai~~A~~n~~~ngl------~-v~~~~~d 345 (425)
T 2jjq_A 280 NLVRKVSE-L---VEGEKILDMYSGVGTFGIYLAKR---GFNVKGFDSNEFAIEMARRNVEINNV------D-AEFEVAS 345 (425)
T ss_dssp HHHHHHHH-H---CCSSEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTC------C-EEEEECC
T ss_pred HHHHHhhc-c---CCCCEEEEeeccchHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCC------c-EEEEECC
Confidence 45666666 3 36789999999999999998875 24799999999999999998865432 2 7788887
Q ss_pred cchHHHHHhhhcccccccCccEEEEc
Q 012954 199 FRHIKSVLGQIDENILRSGVDAILMD 224 (452)
Q Consensus 199 F~~i~~~L~~~~~~l~~~~VDGILfD 224 (452)
..++ +. ..+|.|++|
T Consensus 346 ~~~~---~~--------~~fD~Vv~d 360 (425)
T 2jjq_A 346 DREV---SV--------KGFDTVIVD 360 (425)
T ss_dssp TTTC---CC--------TTCSEEEEC
T ss_pred hHHc---Cc--------cCCCEEEEc
Confidence 7653 11 158999985
No 211
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=95.49 E-value=0.0023 Score=60.02 Aligned_cols=96 Identities=7% Similarity=0.168 Sum_probs=72.3
Q ss_pred CCCCccccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCce
Q 012954 112 QQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLK 191 (452)
Q Consensus 112 ~~~~H~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r 191 (452)
.++.+-+-+++.+++.+. ..++..++|.-.|.|+.+..+++.. +.|+|+|+|+.+++.|++++.. ..+
T Consensus 9 q~fl~~~~~~~~i~~~~~-~~~~~~VLDiG~G~G~~~~~l~~~~---~~v~~id~~~~~~~~a~~~~~~--------~~~ 76 (245)
T 1yub_A 9 QNFLTSEKVLNQIIKQLN-LKETDTVYEIGTGKGHLTTKLAKIS---KQVTSIELDSHLFNLSSEKLKL--------NTR 76 (245)
T ss_dssp CCBCCCTTTHHHHHHHCC-CCSSEEEEECSCCCSSCSHHHHHHS---SEEEESSSSCSSSSSSSCTTTT--------CSE
T ss_pred CCCCCCHHHHHHHHHhcC-CCCCCEEEEEeCCCCHHHHHHHHhC---CeEEEEECCHHHHHHHHHHhcc--------CCc
Confidence 445567778999999997 4678899999999999999999874 5799999999999888776541 237
Q ss_pred EEEEccCcchHHHHHhhhcccccccCccEEEEccCCC
Q 012954 192 THTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMS 228 (452)
Q Consensus 192 ~~li~~nF~~i~~~L~~~~~~l~~~~VDGILfDLGvS 228 (452)
++++++++.+++ +.. ...+ .|+.|+-|.
T Consensus 77 v~~~~~D~~~~~--~~~------~~~f-~vv~n~Py~ 104 (245)
T 1yub_A 77 VTLIHQDILQFQ--FPN------KQRY-KIVGNIPYH 104 (245)
T ss_dssp EEECCSCCTTTT--CCC------SSEE-EEEEECCSS
T ss_pred eEEEECChhhcC--ccc------CCCc-EEEEeCCcc
Confidence 888999887653 110 0235 577776643
No 212
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=95.48 E-value=0.022 Score=50.98 Aligned_cols=53 Identities=21% Similarity=0.145 Sum_probs=43.3
Q ss_pred chHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHH
Q 012954 120 MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHL 178 (452)
Q Consensus 120 Ll~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL 178 (452)
.+.+++..+ .++..++|.-.|.|..+..+++. ...|+|+|.++.+++.|++++
T Consensus 33 ~~~~~~~~~---~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~ 85 (211)
T 3e23_A 33 TLTKFLGEL---PAGAKILELGCGAGYQAEAMLAA---GFDVDATDGSPELAAEASRRL 85 (211)
T ss_dssp HHHHHHTTS---CTTCEEEESSCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHhc---CCCCcEEEECCCCCHHHHHHHHc---CCeEEEECCCHHHHHHHHHhc
Confidence 455555555 36789999999999999988876 247999999999999999875
No 213
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=95.47 E-value=0.018 Score=56.84 Aligned_cols=85 Identities=24% Similarity=0.237 Sum_probs=63.2
Q ss_pred hHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcc
Q 012954 121 LGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFR 200 (452)
Q Consensus 121 l~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~ 200 (452)
...+++.|. ..+++.++|.-.|.|..+..+++..+.. .|+|+|+++.+++.|++++...+. ...++.+++.
T Consensus 185 ~~~ll~~l~-~~~~~~VLDlGcG~G~~~~~la~~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~-------~~~~~~~d~~ 255 (343)
T 2pjd_A 185 SQLLLSTLT-PHTKGKVLDVGCGAGVLSVAFARHSPKI-RLTLCDVSAPAVEASRATLAANGV-------EGEVFASNVF 255 (343)
T ss_dssp HHHHHHHSC-TTCCSBCCBTTCTTSHHHHHHHHHCTTC-BCEEEESBHHHHHHHHHHHHHTTC-------CCEEEECSTT
T ss_pred HHHHHHhcC-cCCCCeEEEecCccCHHHHHHHHHCCCC-EEEEEECCHHHHHHHHHHHHHhCC-------CCEEEEcccc
Confidence 456677774 3467899999999999999999887654 699999999999999998876532 2344555553
Q ss_pred hHHHHHhhhcccccccCccEEEEcc
Q 012954 201 HIKSVLGQIDENILRSGVDAILMDL 225 (452)
Q Consensus 201 ~i~~~L~~~~~~l~~~~VDGILfDL 225 (452)
.. . ...+|.|+.+.
T Consensus 256 ~~---~--------~~~fD~Iv~~~ 269 (343)
T 2pjd_A 256 SE---V--------KGRFDMIISNP 269 (343)
T ss_dssp TT---C--------CSCEEEEEECC
T ss_pred cc---c--------cCCeeEEEECC
Confidence 21 1 13689998874
No 214
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=95.43 E-value=0.0082 Score=59.83 Aligned_cols=85 Identities=16% Similarity=0.164 Sum_probs=63.6
Q ss_pred ccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEcc
Q 012954 118 PVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAK 197 (452)
Q Consensus 118 PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~ 197 (452)
+.+.+.+++.+. ..+++.++|..+|.|+-+.++++.++....++|+|+|+.|++.| . ++.++++
T Consensus 25 ~~l~~~~~~~~~-~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a--------~-------~~~~~~~ 88 (421)
T 2ih2_A 25 PEVVDFMVSLAE-APRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP--------P-------WAEGILA 88 (421)
T ss_dssp HHHHHHHHHHCC-CCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC--------T-------TEEEEES
T ss_pred HHHHHHHHHhhc-cCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC--------C-------CCcEEeC
Confidence 346777778776 34567999999999999999998864445799999999999766 1 4677888
Q ss_pred CcchHHHHHhhhcccccccCccEEEEccCCC
Q 012954 198 NFRHIKSVLGQIDENILRSGVDAILMDLGMS 228 (452)
Q Consensus 198 nF~~i~~~L~~~~~~l~~~~VDGILfDLGvS 228 (452)
++.... ....+|.|+.|-=|.
T Consensus 89 D~~~~~----------~~~~fD~Ii~NPPy~ 109 (421)
T 2ih2_A 89 DFLLWE----------PGEAFDLILGNPPYG 109 (421)
T ss_dssp CGGGCC----------CSSCEEEEEECCCCC
T ss_pred ChhhcC----------ccCCCCEEEECcCcc
Confidence 875421 123699999985554
No 215
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=95.43 E-value=0.031 Score=55.89 Aligned_cols=77 Identities=14% Similarity=0.122 Sum_probs=59.5
Q ss_pred CEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhccccc
Q 012954 135 TSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENIL 214 (452)
Q Consensus 135 giyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~l~ 214 (452)
..++|.=+|.|+-+..+++.+|.. +|+++|+|+.+++.|++.+.... ..|+++++++... ++....
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~-~v~~VEidp~vi~~Ar~~~~~~~------~~rv~v~~~Da~~---~l~~~~---- 156 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQS-RNTVVELDAELARLSREWFDIPR------APRVKIRVDDARM---VAESFT---- 156 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTC-EEEEEESCHHHHHHHHHHSCCCC------TTTEEEEESCHHH---HHHTCC----
T ss_pred CEEEEEECCcCHHHHHHHHHCCCc-EEEEEECCHHHHHHHHHhccccC------CCceEEEECcHHH---HHhhcc----
Confidence 389999999999999999888875 79999999999999998774321 2478888877653 343321
Q ss_pred ccCccEEEEcc
Q 012954 215 RSGVDAILMDL 225 (452)
Q Consensus 215 ~~~VDGILfDL 225 (452)
...+|.|+.|+
T Consensus 157 ~~~fDvIi~D~ 167 (317)
T 3gjy_A 157 PASRDVIIRDV 167 (317)
T ss_dssp TTCEEEEEECC
T ss_pred CCCCCEEEECC
Confidence 24699999984
No 216
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=95.42 E-value=0.02 Score=55.96 Aligned_cols=83 Identities=13% Similarity=0.105 Sum_probs=58.6
Q ss_pred CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhccc
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDEN 212 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~ 212 (452)
+...++|.-.|.|+-+..+++..+ ..+|+++|+|+.+++.|++.+....... ....|++++.++-... +...
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~-~~~V~~VDid~~vi~~ar~~~~~~~~~~-~~~~rv~~~~~D~~~~---l~~~--- 154 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKN-VESITMVEIDAGVVSFCRQYLPNHNAGS-YDDPRFKLVIDDGVNF---VNQT--- 154 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTT-CCEEEEECSCTTHHHHHHHHCHHHHSSC-TTCTTCCEECSCSCC------CC---
T ss_pred CCCEEEEEeCChhHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHhhhhccccc-ccCCceEEEEChHHHH---Hhhc---
Confidence 457999999999999999997644 4579999999999999999876542100 0023677888775432 2221
Q ss_pred ccccCccEEEEcc
Q 012954 213 ILRSGVDAILMDL 225 (452)
Q Consensus 213 l~~~~VDGILfDL 225 (452)
...+|.|+.|+
T Consensus 155 --~~~fDvIi~D~ 165 (294)
T 3adn_A 155 --SQTFDVIISDC 165 (294)
T ss_dssp --CCCEEEEEECC
T ss_pred --CCCccEEEECC
Confidence 24699999985
No 217
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=95.40 E-value=0.056 Score=53.68 Aligned_cols=73 Identities=19% Similarity=0.198 Sum_probs=59.5
Q ss_pred chHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCc
Q 012954 120 MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNF 199 (452)
Q Consensus 120 Ll~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF 199 (452)
+..++++.+. ..+...++|.-.|.|..+..+++.+|.. +++++|+ +.+++.|++++...+. ..+++++..+|
T Consensus 190 ~~~~l~~~~~-~~~~~~vlDvG~G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~~~~~~~~l-----~~~v~~~~~d~ 261 (369)
T 3gwz_A 190 EAGQVAAAYD-FSGAATAVDIGGGRGSLMAAVLDAFPGL-RGTLLER-PPVAEEARELLTGRGL-----ADRCEILPGDF 261 (369)
T ss_dssp HHHHHHHHSC-CTTCSEEEEETCTTSHHHHHHHHHCTTC-EEEEEEC-HHHHHHHHHHHHHTTC-----TTTEEEEECCT
T ss_pred hHHHHHHhCC-CccCcEEEEeCCCccHHHHHHHHHCCCC-eEEEEcC-HHHHHHHHHhhhhcCc-----CCceEEeccCC
Confidence 3566777775 4567899999999999999999998875 6899999 9999999998876543 23788888887
Q ss_pred c
Q 012954 200 R 200 (452)
Q Consensus 200 ~ 200 (452)
.
T Consensus 262 ~ 262 (369)
T 3gwz_A 262 F 262 (369)
T ss_dssp T
T ss_pred C
Confidence 4
No 218
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=95.39 E-value=0.034 Score=47.89 Aligned_cols=77 Identities=18% Similarity=0.127 Sum_probs=57.0
Q ss_pred HHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcch
Q 012954 122 GEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRH 201 (452)
Q Consensus 122 ~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~ 201 (452)
.++++.+. ..++..++|.-.|.|..+..+++.. ..++|+|.++.+++.++++. .++.+++.+
T Consensus 7 ~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~-----------~~v~~~~~d--- 68 (170)
T 3i9f_A 7 EEYLPNIF-EGKKGVIVDYGCGNGFYCKYLLEFA---TKLYCIDINVIALKEVKEKF-----------DSVITLSDP--- 68 (170)
T ss_dssp TTTHHHHH-SSCCEEEEEETCTTCTTHHHHHTTE---EEEEEECSCHHHHHHHHHHC-----------TTSEEESSG---
T ss_pred HHHHHhcC-cCCCCeEEEECCCCCHHHHHHHhhc---CeEEEEeCCHHHHHHHHHhC-----------CCcEEEeCC---
Confidence 34566665 3577899999999999999998875 26999999999999998861 146667766
Q ss_pred HHHHHhhhcccccccCccEEEEcc
Q 012954 202 IKSVLGQIDENILRSGVDAILMDL 225 (452)
Q Consensus 202 i~~~L~~~~~~l~~~~VDGILfDL 225 (452)
+. . ....+|.|+...
T Consensus 69 ----~~-~----~~~~~D~v~~~~ 83 (170)
T 3i9f_A 69 ----KE-I----PDNSVDFILFAN 83 (170)
T ss_dssp ----GG-S----CTTCEEEEEEES
T ss_pred ----CC-C----CCCceEEEEEcc
Confidence 11 1 124699998764
No 219
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=95.35 E-value=0.044 Score=54.31 Aligned_cols=77 Identities=14% Similarity=0.076 Sum_probs=60.1
Q ss_pred CCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhcc
Q 012954 132 RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDE 211 (452)
Q Consensus 132 ~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~ 211 (452)
.++..++|.-.|.|..+..+++. +. .+|+|+|.+ .+++.|+++++..+. ..++++++++..++. +
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~-g~-~~v~gvD~s-~~l~~a~~~~~~~~~-----~~~v~~~~~d~~~~~--~----- 129 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKA-GA-RKVIGIECS-SISDYAVKIVKANKL-----DHVVTIIKGKVEEVE--L----- 129 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHT-TC-SEEEEEECS-THHHHHHHHHHHTTC-----TTTEEEEESCTTTCC--C-----
T ss_pred CCCCEEEEEeccchHHHHHHHHC-CC-CEEEEECcH-HHHHHHHHHHHHcCC-----CCcEEEEECcHHHcc--C-----
Confidence 36789999999999988888876 43 579999999 499999998876543 236899999887651 1
Q ss_pred cccccCccEEEEcc
Q 012954 212 NILRSGVDAILMDL 225 (452)
Q Consensus 212 ~l~~~~VDGILfDL 225 (452)
....+|.|+.+.
T Consensus 130 --~~~~fD~Iis~~ 141 (349)
T 3q7e_A 130 --PVEKVDIIISEW 141 (349)
T ss_dssp --SSSCEEEEEECC
T ss_pred --CCCceEEEEEcc
Confidence 124799999875
No 220
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=95.29 E-value=0.061 Score=53.26 Aligned_cols=86 Identities=19% Similarity=0.252 Sum_probs=63.1
Q ss_pred HHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchH
Q 012954 123 EVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHI 202 (452)
Q Consensus 123 Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i 202 (452)
+++..+.. ...+.++|.-.|.|..+..+++++|.. +++++|. +.+++.|++++...+. ..+++++.++|...
T Consensus 170 ~~l~~~~~-~~~~~vlDvG~G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~~~ 241 (363)
T 3dp7_A 170 KALEIVFS-HHPKRLLDIGGNTGKWATQCVQYNKEV-EVTIVDL-PQQLEMMRKQTAGLSG-----SERIHGHGANLLDR 241 (363)
T ss_dssp HHHHHHGG-GCCSEEEEESCTTCHHHHHHHHHSTTC-EEEEEEC-HHHHHHHHHHHTTCTT-----GGGEEEEECCCCSS
T ss_pred HHHHHhcc-cCCCEEEEeCCCcCHHHHHHHHhCCCC-EEEEEeC-HHHHHHHHHHHHhcCc-----ccceEEEEcccccc
Confidence 44544432 356899999999999999999999875 6999999 9999999998876542 24788888887541
Q ss_pred HHHHhhhcccccccCccEEEEc
Q 012954 203 KSVLGQIDENILRSGVDAILMD 224 (452)
Q Consensus 203 ~~~L~~~~~~l~~~~VDGILfD 224 (452)
. . .+ ...+|.|++-
T Consensus 242 ~-----~--~~-p~~~D~v~~~ 255 (363)
T 3dp7_A 242 D-----V--PF-PTGFDAVWMS 255 (363)
T ss_dssp S-----C--CC-CCCCSEEEEE
T ss_pred C-----C--CC-CCCcCEEEEe
Confidence 0 0 01 1368888763
No 221
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=95.25 E-value=0.044 Score=55.00 Aligned_cols=86 Identities=15% Similarity=0.099 Sum_probs=64.8
Q ss_pred hHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcc
Q 012954 121 LGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFR 200 (452)
Q Consensus 121 l~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~ 200 (452)
.+.+++.+. ..++..++|.-.|.|..+..+++. +. .+|+|+|.+ .+++.|+++++..+. ..++++++++..
T Consensus 52 ~~~i~~~~~-~~~~~~VLDlGcGtG~ls~~la~~-g~-~~V~gvD~s-~~~~~a~~~~~~~~~-----~~~v~~~~~d~~ 122 (376)
T 3r0q_C 52 FNAVFQNKH-HFEGKTVLDVGTGSGILAIWSAQA-GA-RKVYAVEAT-KMADHARALVKANNL-----DHIVEVIEGSVE 122 (376)
T ss_dssp HHHHHTTTT-TTTTCEEEEESCTTTHHHHHHHHT-TC-SEEEEEESS-TTHHHHHHHHHHTTC-----TTTEEEEESCGG
T ss_pred HHHHHhccc-cCCCCEEEEeccCcCHHHHHHHhc-CC-CEEEEEccH-HHHHHHHHHHHHcCC-----CCeEEEEECchh
Confidence 344444443 357889999999999999888876 33 479999999 999999998877643 246899999887
Q ss_pred hHHHHHhhhcccccccCccEEEEcc
Q 012954 201 HIKSVLGQIDENILRSGVDAILMDL 225 (452)
Q Consensus 201 ~i~~~L~~~~~~l~~~~VDGILfDL 225 (452)
++. + ...+|.|+.++
T Consensus 123 ~~~--~--------~~~~D~Iv~~~ 137 (376)
T 3r0q_C 123 DIS--L--------PEKVDVIISEW 137 (376)
T ss_dssp GCC--C--------SSCEEEEEECC
T ss_pred hcC--c--------CCcceEEEEcC
Confidence 642 1 14799999976
No 222
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=95.16 E-value=0.03 Score=49.34 Aligned_cols=66 Identities=9% Similarity=0.142 Sum_probs=50.4
Q ss_pred CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhccc
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDEN 212 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~ 212 (452)
+++.++|.-.|.|..+..+++.. .|+|+|+++.+++. . .+++++++++.+ .+.
T Consensus 23 ~~~~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~--------~-------~~~~~~~~d~~~---~~~----- 75 (170)
T 3q87_B 23 EMKIVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES--------H-------RGGNLVRADLLC---SIN----- 75 (170)
T ss_dssp CSCEEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT--------C-------SSSCEEECSTTT---TBC-----
T ss_pred CCCeEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc--------c-------cCCeEEECChhh---hcc-----
Confidence 67899999999998888888765 69999999999986 1 145677777654 111
Q ss_pred ccccCccEEEEccCC
Q 012954 213 ILRSGVDAILMDLGM 227 (452)
Q Consensus 213 l~~~~VDGILfDLGv 227 (452)
...+|.|+.|..+
T Consensus 76 --~~~fD~i~~n~~~ 88 (170)
T 3q87_B 76 --QESVDVVVFNPPY 88 (170)
T ss_dssp --GGGCSEEEECCCC
T ss_pred --cCCCCEEEECCCC
Confidence 1369999998655
No 223
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=95.03 E-value=0.074 Score=51.94 Aligned_cols=74 Identities=16% Similarity=0.229 Sum_probs=59.7
Q ss_pred cchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccC
Q 012954 119 VMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKN 198 (452)
Q Consensus 119 VLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~n 198 (452)
.....+++.+. ..++..++|.-.|.|..+..+++.++.. .++++|+ +.+++.|++++...+. ..+++++..+
T Consensus 170 ~~~~~l~~~~~-~~~~~~vLDvG~G~G~~~~~l~~~~~~~-~~~~~D~-~~~~~~a~~~~~~~~~-----~~~v~~~~~d 241 (360)
T 1tw3_A 170 VAFDAPAAAYD-WTNVRHVLDVGGGKGGFAAAIARRAPHV-SATVLEM-AGTVDTARSYLKDEGL-----SDRVDVVEGD 241 (360)
T ss_dssp TTTHHHHHHSC-CTTCSEEEEETCTTSHHHHHHHHHCTTC-EEEEEEC-TTHHHHHHHHHHHTTC-----TTTEEEEECC
T ss_pred HhHHHHHHhCC-CccCcEEEEeCCcCcHHHHHHHHhCCCC-EEEEecC-HHHHHHHHHHHHhcCC-----CCceEEEeCC
Confidence 35677788875 4577899999999999999999998764 6899999 9999999998876543 2368888887
Q ss_pred cc
Q 012954 199 FR 200 (452)
Q Consensus 199 F~ 200 (452)
+.
T Consensus 242 ~~ 243 (360)
T 1tw3_A 242 FF 243 (360)
T ss_dssp TT
T ss_pred CC
Confidence 64
No 224
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=95.01 E-value=0.032 Score=55.10 Aligned_cols=89 Identities=19% Similarity=0.168 Sum_probs=59.5
Q ss_pred hHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEE-EccCc
Q 012954 121 LGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHT-FAKNF 199 (452)
Q Consensus 121 l~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~l-i~~nF 199 (452)
|.++++.+....++..++|.-+|.|+.|..+++. + .++|+|+|+++.+++.+.+. . .++.. -..|+
T Consensus 73 l~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~-g-a~~V~aVDvs~~mL~~a~r~---~--------~rv~~~~~~ni 139 (291)
T 3hp7_A 73 LEKALAVFNLSVEDMITIDIGASTGGFTDVMLQN-G-AKLVYAVDVGTNQLVWKLRQ---D--------DRVRSMEQYNF 139 (291)
T ss_dssp HHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHT-T-CSEEEEECSSSSCSCHHHHT---C--------TTEEEECSCCG
T ss_pred HHHHHHhcCCCccccEEEecCCCccHHHHHHHhC-C-CCEEEEEECCHHHHHHHHHh---C--------cccceecccCc
Confidence 6788888864335679999999999999998876 3 35799999999999875331 1 13322 23566
Q ss_pred chHHHHHhhhcccccccCccEEEEccCCC
Q 012954 200 RHIKSVLGQIDENILRSGVDAILMDLGMS 228 (452)
Q Consensus 200 ~~i~~~L~~~~~~l~~~~VDGILfDLGvS 228 (452)
.++.. .. +....+|.|++|+-+.
T Consensus 140 ~~l~~--~~----l~~~~fD~v~~d~sf~ 162 (291)
T 3hp7_A 140 RYAEP--VD----FTEGLPSFASIDVSFI 162 (291)
T ss_dssp GGCCG--GG----CTTCCCSEEEECCSSS
T ss_pred eecch--hh----CCCCCCCEEEEEeeHh
Confidence 55421 11 1112389999987543
No 225
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=95.01 E-value=0.042 Score=53.31 Aligned_cols=70 Identities=17% Similarity=0.195 Sum_probs=54.7
Q ss_pred HHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcc
Q 012954 123 EVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFR 200 (452)
Q Consensus 123 Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~ 200 (452)
++++.+. ..+...++|.-.|.|..+..+++.+|.. +++++|+ +.+++.|++++...+. ..+++++..+|.
T Consensus 160 ~~~~~~~-~~~~~~vlDvG~G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~~~~~~~~~-----~~~v~~~~~d~~ 229 (332)
T 3i53_A 160 GIAAKYD-WAALGHVVDVGGGSGGLLSALLTAHEDL-SGTVLDL-QGPASAAHRRFLDTGL-----SGRAQVVVGSFF 229 (332)
T ss_dssp TGGGSSC-CGGGSEEEEETCTTSHHHHHHHHHCTTC-EEEEEEC-HHHHHHHHHHHHHTTC-----TTTEEEEECCTT
T ss_pred HHHHhCC-CCCCCEEEEeCCChhHHHHHHHHHCCCC-eEEEecC-HHHHHHHHHhhhhcCc-----CcCeEEecCCCC
Confidence 4444443 3356899999999999999999999875 6899999 9999999998876543 236777777763
No 226
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=95.01 E-value=0.061 Score=52.48 Aligned_cols=47 Identities=17% Similarity=0.297 Sum_probs=39.5
Q ss_pred CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhh
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSL 181 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~ 181 (452)
++..++|.-+|.|+++..++... ...|+|+|+++.+|+.|+++....
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~--~~~v~GiD~S~~~l~~A~~~~~~~ 94 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGE--IALLVATDPDADAIARGNERYNKL 94 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCeEEEEecCCcHhHHHHHhcC--CCeEEEEECCHHHHHHHHHHHHhc
Confidence 47899999999999999877642 347999999999999999887543
No 227
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=95.00 E-value=0.094 Score=50.12 Aligned_cols=57 Identities=14% Similarity=0.062 Sum_probs=44.6
Q ss_pred cchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeC-CHHHHHHHHHHH
Q 012954 119 VMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDV-DPSALAKARAHL 178 (452)
Q Consensus 119 VLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDr-D~~Ai~~Ak~rL 178 (452)
+|++.+++.+. ..++..++|.-.|.|..+..++.. +. ++|+|+|+ ++.+++.|+++.
T Consensus 66 ~l~~~l~~~~~-~~~~~~vLDlG~G~G~~~~~~a~~-~~-~~v~~~D~s~~~~~~~a~~n~ 123 (281)
T 3bzb_A 66 ALADTLCWQPE-LIAGKTVCELGAGAGLVSIVAFLA-GA-DQVVATDYPDPEILNSLESNI 123 (281)
T ss_dssp HHHHHHHHCGG-GTTTCEEEETTCTTSHHHHHHHHT-TC-SEEEEEECSCHHHHHHHHHHH
T ss_pred HHHHHHHhcch-hcCCCeEEEecccccHHHHHHHHc-CC-CEEEEEeCCCHHHHHHHHHHH
Confidence 45666666554 246789999999999888776654 43 47999999 999999999887
No 228
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=94.97 E-value=0.058 Score=51.26 Aligned_cols=80 Identities=11% Similarity=0.005 Sum_probs=53.5
Q ss_pred CCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhh-h------ccCCC----CCCceEEEEccCcc
Q 012954 132 RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNS-L------LHGQA----HPHLKTHTFAKNFR 200 (452)
Q Consensus 132 ~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~-~------~~~~~----~~~~r~~li~~nF~ 200 (452)
.+++.++|.=+|.|.++..+.+. + ..|+|+|..+.|++.|+++... + ..+.. ....+++++++++.
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~-G--~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~ 143 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADR-G--HTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIF 143 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHT-T--CEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTT
T ss_pred CCCCeEEEeCCCCcHHHHHHHHC-C--CeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccc
Confidence 46789999999999888887765 3 3699999999999999876531 0 00000 00136888888887
Q ss_pred hHHHHHhhhcccccccCccEEE
Q 012954 201 HIKSVLGQIDENILRSGVDAIL 222 (452)
Q Consensus 201 ~i~~~L~~~~~~l~~~~VDGIL 222 (452)
++.. . . ...+|+|+
T Consensus 144 ~l~~---~-~----~~~FD~V~ 157 (252)
T 2gb4_A 144 DLPR---A-N----IGKFDRIW 157 (252)
T ss_dssp TGGG---G-C----CCCEEEEE
T ss_pred cCCc---c-c----CCCEEEEE
Confidence 6531 0 0 13688776
No 229
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=94.95 E-value=0.033 Score=51.72 Aligned_cols=43 Identities=21% Similarity=0.267 Sum_probs=37.7
Q ss_pred CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHH
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHL 178 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL 178 (452)
+++.++|.-+|.|..+..+++.. ..|+|+|.++.+++.|++++
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~ 92 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADSF---GTVEGLELSADMLAIARRRN 92 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTTS---SEEEEEESCHHHHHHHHHHC
T ss_pred CCCcEEEeCCcCCHHHHHHHHcC---CeEEEEECCHHHHHHHHhhC
Confidence 56899999999999999888763 36999999999999998864
No 230
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=94.92 E-value=0.045 Score=53.03 Aligned_cols=64 Identities=17% Similarity=0.233 Sum_probs=50.3
Q ss_pred CCCcccc-chHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhh
Q 012954 113 QSSHIPV-MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSL 181 (452)
Q Consensus 113 ~~~H~PV-Ll~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~ 181 (452)
|..-.|+ |+..+|+.+. .++++++|.-+|.|--+.+.++ .+ .+++|+|+|+++++.|+++++..
T Consensus 216 h~~~~p~~l~~~~i~~~~--~~~~~vlD~f~GsGt~~~~a~~-~g--~~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 216 HPAPFPLELAERLVRMFS--FVGDVVLDPFAGTGTTLIAAAR-WG--RRALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp --CCSCHHHHHHHHHHHC--CTTCEEEETTCTTTHHHHHHHH-TT--CEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHhC--CCCCEEEECCCCCCHHHHHHHH-cC--CeEEEEeCCHHHHHHHHHHHHHh
Confidence 3444665 8888888885 5899999999999966655554 43 47999999999999999998775
No 231
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=94.88 E-value=0.076 Score=52.51 Aligned_cols=85 Identities=13% Similarity=0.076 Sum_probs=63.6
Q ss_pred hHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcc
Q 012954 121 LGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFR 200 (452)
Q Consensus 121 l~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~ 200 (452)
.+.+++.+. ..++..++|.-.|.|..+..+++. +. .+|+|+|.++ .++.|+++++..+. ..+++++++++.
T Consensus 39 ~~~i~~~l~-~~~~~~VLDiGcGtG~ls~~la~~-g~-~~V~~vD~s~-~~~~a~~~~~~~~l-----~~~v~~~~~d~~ 109 (348)
T 2y1w_A 39 QRAILQNHT-DFKDKIVLDVGCGSGILSFFAAQA-GA-RKIYAVEAST-MAQHAEVLVKSNNL-----TDRIVVIPGKVE 109 (348)
T ss_dssp HHHHHHTGG-GTTTCEEEEETCTTSHHHHHHHHT-TC-SEEEEEECST-HHHHHHHHHHHTTC-----TTTEEEEESCTT
T ss_pred HHHHHhccc-cCCcCEEEEcCCCccHHHHHHHhC-CC-CEEEEECCHH-HHHHHHHHHHHcCC-----CCcEEEEEcchh
Confidence 456677775 357889999999999999888865 33 4799999997 66888888876543 237888998887
Q ss_pred hHHHHHhhhcccccccCccEEEEc
Q 012954 201 HIKSVLGQIDENILRSGVDAILMD 224 (452)
Q Consensus 201 ~i~~~L~~~~~~l~~~~VDGILfD 224 (452)
++. . ...+|.|+.+
T Consensus 110 ~~~-----~-----~~~~D~Ivs~ 123 (348)
T 2y1w_A 110 EVS-----L-----PEQVDIIISE 123 (348)
T ss_dssp TCC-----C-----SSCEEEEEEC
T ss_pred hCC-----C-----CCceeEEEEe
Confidence 641 1 1369999986
No 232
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=94.76 E-value=0.041 Score=51.21 Aligned_cols=71 Identities=21% Similarity=0.253 Sum_probs=53.7
Q ss_pred CCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhcc
Q 012954 132 RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDE 211 (452)
Q Consensus 132 ~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~ 211 (452)
.++..++|.-.|.|..+..+++.++. ..|+|+|.++.+++.|+++.. ++.++..++.++.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~-~~v~~vD~s~~~~~~a~~~~~-----------~~~~~~~d~~~~~-------- 143 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPE-ITTFGLDVSKVAIKAAAKRYP-----------QVTFCVASSHRLP-------- 143 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTT-SEEEEEESCHHHHHHHHHHCT-----------TSEEEECCTTSCS--------
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCC-CeEEEEeCCHHHHHHHHHhCC-----------CcEEEEcchhhCC--------
Confidence 47789999999999999999887754 479999999999999987542 3456667665431
Q ss_pred cccccCccEEEE
Q 012954 212 NILRSGVDAILM 223 (452)
Q Consensus 212 ~l~~~~VDGILf 223 (452)
+....+|.|+.
T Consensus 144 -~~~~~fD~v~~ 154 (269)
T 1p91_A 144 -FSDTSMDAIIR 154 (269)
T ss_dssp -BCTTCEEEEEE
T ss_pred -CCCCceeEEEE
Confidence 11236898885
No 233
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=94.72 E-value=0.078 Score=51.99 Aligned_cols=76 Identities=18% Similarity=0.131 Sum_probs=57.9
Q ss_pred CCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhcc
Q 012954 132 RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDE 211 (452)
Q Consensus 132 ~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~ 211 (452)
.++..++|.-.|.|.-+..+++. +. .+|+|+|.+ .+++.|+++++..+. ..++++++++..++. .
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~-g~-~~v~~vD~s-~~~~~a~~~~~~~~~-----~~~i~~~~~d~~~~~-----~-- 101 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKH-GA-KHVIGVDMS-SIIEMAKELVELNGF-----SDKITLLRGKLEDVH-----L-- 101 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHT-CC-SEEEEEESS-THHHHHHHHHHHTTC-----TTTEEEEESCTTTSC-----C--
T ss_pred cCCCEEEEecCccHHHHHHHHHC-CC-CEEEEEChH-HHHHHHHHHHHHcCC-----CCCEEEEECchhhcc-----C--
Confidence 36789999999999888877765 43 479999999 589999988876543 236888998877641 1
Q ss_pred cccccCccEEEEc
Q 012954 212 NILRSGVDAILMD 224 (452)
Q Consensus 212 ~l~~~~VDGILfD 224 (452)
....+|.|+.+
T Consensus 102 --~~~~~D~Ivs~ 112 (328)
T 1g6q_1 102 --PFPKVDIIISE 112 (328)
T ss_dssp --SSSCEEEEEEC
T ss_pred --CCCcccEEEEe
Confidence 12469999987
No 234
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=94.70 E-value=0.072 Score=47.18 Aligned_cols=70 Identities=9% Similarity=0.005 Sum_probs=54.2
Q ss_pred CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhccc
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDEN 212 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~ 212 (452)
.++.++|.-.|.|..+..+++. + ..++|+|.++.+++.|+++.. ++.++++++.++. +
T Consensus 41 ~~~~vLDiGcG~G~~~~~l~~~-~--~~v~gvD~s~~~~~~a~~~~~-----------~~~~~~~d~~~~~--~------ 98 (203)
T 3h2b_A 41 VDGVILDVGSGTGRWTGHLASL-G--HQIEGLEPATRLVELARQTHP-----------SVTFHHGTITDLS--D------ 98 (203)
T ss_dssp CCSCEEEETCTTCHHHHHHHHT-T--CCEEEECCCHHHHHHHHHHCT-----------TSEEECCCGGGGG--G------
T ss_pred CCCeEEEecCCCCHHHHHHHhc-C--CeEEEEeCCHHHHHHHHHhCC-----------CCeEEeCcccccc--c------
Confidence 4789999999999999988876 2 359999999999999987631 4677888887642 1
Q ss_pred ccccCccEEEEcc
Q 012954 213 ILRSGVDAILMDL 225 (452)
Q Consensus 213 l~~~~VDGILfDL 225 (452)
....+|.|+...
T Consensus 99 -~~~~fD~v~~~~ 110 (203)
T 3h2b_A 99 -SPKRWAGLLAWY 110 (203)
T ss_dssp -SCCCEEEEEEES
T ss_pred -CCCCeEEEEehh
Confidence 124699998864
No 235
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=94.60 E-value=0.069 Score=55.82 Aligned_cols=86 Identities=12% Similarity=0.062 Sum_probs=63.8
Q ss_pred chHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCc
Q 012954 120 MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNF 199 (452)
Q Consensus 120 Ll~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF 199 (452)
+.+++++.+. ..++..++|.-.|.|..+..+++ .+. .+|+|+|.++ +++.|+++++..+. ..+++++++++
T Consensus 146 ~~~~il~~l~-~~~~~~VLDiGcGtG~la~~la~-~~~-~~V~gvD~s~-~l~~A~~~~~~~gl-----~~~v~~~~~d~ 216 (480)
T 3b3j_A 146 YQRAILQNHT-DFKDKIVLDVGCGSGILSFFAAQ-AGA-RKIYAVEAST-MAQHAEVLVKSNNL-----TDRIVVIPGKV 216 (480)
T ss_dssp HHHHHHHTGG-GTTTCEEEEESCSTTHHHHHHHH-TTC-SEEEEEECHH-HHHHHHHHHHHTTC-----TTTEEEEESCT
T ss_pred HHHHHHHhhh-hcCCCEEEEecCcccHHHHHHHH-cCC-CEEEEEEcHH-HHHHHHHHHHHcCC-----CCcEEEEECch
Confidence 3455777775 34778999999999998887776 444 4799999998 88999988876543 23788999888
Q ss_pred chHHHHHhhhcccccccCccEEEEc
Q 012954 200 RHIKSVLGQIDENILRSGVDAILMD 224 (452)
Q Consensus 200 ~~i~~~L~~~~~~l~~~~VDGILfD 224 (452)
.++. . ...+|.|+.+
T Consensus 217 ~~~~-----~-----~~~fD~Ivs~ 231 (480)
T 3b3j_A 217 EEVS-----L-----PEQVDIIISE 231 (480)
T ss_dssp TTCC-----C-----SSCEEEEECC
T ss_pred hhCc-----c-----CCCeEEEEEe
Confidence 6531 1 1368888875
No 236
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=94.52 E-value=0.085 Score=48.29 Aligned_cols=55 Identities=11% Similarity=0.097 Sum_probs=42.2
Q ss_pred chHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHH
Q 012954 120 MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAH 177 (452)
Q Consensus 120 Ll~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~r 177 (452)
+.+.....+....++..++|.-+|.|..+..+.+. + ..|+|+|.++.+++.|+++
T Consensus 28 ~~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~-~--~~v~gvD~s~~~~~~a~~~ 82 (240)
T 3dli_A 28 VKARLRRYIPYFKGCRRVLDIGCGRGEFLELCKEE-G--IESIGVDINEDMIKFCEGK 82 (240)
T ss_dssp HHHHHGGGGGGTTTCSCEEEETCTTTHHHHHHHHH-T--CCEEEECSCHHHHHHHHTT
T ss_pred HHHHHHHHHhhhcCCCeEEEEeCCCCHHHHHHHhC-C--CcEEEEECCHHHHHHHHhh
Confidence 34444445543346789999999999999888876 2 2489999999999998764
No 237
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=94.37 E-value=0.059 Score=55.19 Aligned_cols=94 Identities=17% Similarity=0.160 Sum_probs=64.6
Q ss_pred chHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhC-------------CCCCEEEEEeCCHHHHHHHHHHHhhhccCCC
Q 012954 120 MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAH-------------PELKLHIGVDVDPSALAKARAHLNSLLHGQA 186 (452)
Q Consensus 120 Ll~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~-------------p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~ 186 (452)
+++-+++.+. +.++..++|.++|.||....+++.+ +. ..++|+|+|+.+++.|+.++.-.+..
T Consensus 159 v~~~mv~~l~-~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~-~~i~G~Ei~~~~~~lA~~nl~l~g~~-- 234 (445)
T 2okc_A 159 LIQAMVDCIN-PQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRD-KALHGVDNTPLVVTLASMNLYLHGIG-- 234 (445)
T ss_dssp HHHHHHHHHC-CCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHH-TTEEEEESCHHHHHHHHHHHHHTTCC--
T ss_pred HHHHHHHHhC-CCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcC-eEEEEEeCCHHHHHHHHHHHHHhCCC--
Confidence 4555666665 4677899999999999998888764 22 35999999999999999877544321
Q ss_pred CCCceEEEEccCcchHHHHHhhhcccccccCccEEEEccCCCc
Q 012954 187 HPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSS 229 (452)
Q Consensus 187 ~~~~r~~li~~nF~~i~~~L~~~~~~l~~~~VDGILfDLGvSS 229 (452)
..++.++++++-.. .. ...+|.|+.|-=|+.
T Consensus 235 --~~~~~i~~gD~l~~------~~----~~~fD~Iv~NPPf~~ 265 (445)
T 2okc_A 235 --TDRSPIVCEDSLEK------EP----STLVDVILANPPFGT 265 (445)
T ss_dssp --SSCCSEEECCTTTS------CC----SSCEEEEEECCCSSC
T ss_pred --cCCCCEeeCCCCCC------cc----cCCcCEEEECCCCCC
Confidence 01345666665321 11 136999999965554
No 238
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=94.37 E-value=0.059 Score=52.10 Aligned_cols=73 Identities=26% Similarity=0.338 Sum_probs=58.2
Q ss_pred chHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCc
Q 012954 120 MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNF 199 (452)
Q Consensus 120 Ll~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF 199 (452)
...++++.+. ..+ ..++|.-.|.|..+..+++.+|.. +++++|+ +.+++.|++++...+. ..+++++..++
T Consensus 156 ~~~~~~~~~~-~~~-~~vlDvG~G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~~~~~~~~~-----~~~v~~~~~d~ 226 (334)
T 2ip2_A 156 AFHEIPRLLD-FRG-RSFVDVGGGSGELTKAILQAEPSA-RGVMLDR-EGSLGVARDNLSSLLA-----GERVSLVGGDM 226 (334)
T ss_dssp HHHHHHHHSC-CTT-CEEEEETCTTCHHHHHHHHHCTTC-EEEEEEC-TTCTHHHHHHTHHHHH-----TTSEEEEESCT
T ss_pred HHHHHHHhCC-CCC-CEEEEeCCCchHHHHHHHHHCCCC-EEEEeCc-HHHHHHHHHHHhhcCC-----CCcEEEecCCC
Confidence 3567777764 335 899999999999999999999874 7999999 9999999998766543 13788888887
Q ss_pred ch
Q 012954 200 RH 201 (452)
Q Consensus 200 ~~ 201 (452)
..
T Consensus 227 ~~ 228 (334)
T 2ip2_A 227 LQ 228 (334)
T ss_dssp TT
T ss_pred CC
Confidence 53
No 239
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=94.20 E-value=0.097 Score=49.71 Aligned_cols=64 Identities=19% Similarity=0.361 Sum_probs=47.8
Q ss_pred CCCcccc-chHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhh
Q 012954 113 QSSHIPV-MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSL 181 (452)
Q Consensus 113 ~~~H~PV-Ll~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~ 181 (452)
+..-.|+ |+..+|+... .++++++|.-+|.| -+..-..+++ .++||+|+++.+++.|+++++..
T Consensus 193 ~~~~~p~~l~~~~i~~~~--~~~~~vlD~f~GsG-tt~~~a~~~g--r~~ig~e~~~~~~~~~~~r~~~~ 257 (260)
T 1g60_A 193 HITPKPRDLIERIIRASS--NPNDLVLDCFMGSG-TTAIVAKKLG--RNFIGCDMNAEYVNQANFVLNQL 257 (260)
T ss_dssp --CCCCHHHHHHHHHHHC--CTTCEEEESSCTTC-HHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHC-
T ss_pred CCCCCCHHHHHHHHHHhC--CCCCEEEECCCCCC-HHHHHHHHcC--CeEEEEeCCHHHHHHHHHHHHhc
Confidence 4445665 8888898885 58999999999999 3333333353 57999999999999999998753
No 240
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=94.18 E-value=0.093 Score=47.88 Aligned_cols=83 Identities=13% Similarity=0.083 Sum_probs=60.9
Q ss_pred cccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEc
Q 012954 117 IPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196 (452)
Q Consensus 117 ~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~ 196 (452)
...++.+++..+. .++..++|.-.|.|.++..+++. ...|+|+|.++.+++.|+++. .++++++
T Consensus 34 ~~~l~~~~~~~~~--~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~-----------~~~~~~~ 97 (226)
T 3m33_A 34 PELTFDLWLSRLL--TPQTRVLEAGCGHGPDAARFGPQ---AARWAAYDFSPELLKLARANA-----------PHADVYE 97 (226)
T ss_dssp TTHHHHHHHHHHC--CTTCEEEEESCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHC-----------TTSEEEE
T ss_pred HHHHHHHHHHhcC--CCCCeEEEeCCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHhC-----------CCceEEE
Confidence 3456777777654 47889999999999999998887 247999999999999998861 1466777
Q ss_pred cCcc-hHHHHHhhhccccc-ccCccEEEEc
Q 012954 197 KNFR-HIKSVLGQIDENIL-RSGVDAILMD 224 (452)
Q Consensus 197 ~nF~-~i~~~L~~~~~~l~-~~~VDGILfD 224 (452)
.+.. .+. +. ...+|.|+..
T Consensus 98 ~d~~~~~~---------~~~~~~fD~v~~~ 118 (226)
T 3m33_A 98 WNGKGELP---------AGLGAPFGLIVSR 118 (226)
T ss_dssp CCSCSSCC---------TTCCCCEEEEEEE
T ss_pred cchhhccC---------CcCCCCEEEEEeC
Confidence 7763 221 01 2368888764
No 241
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=93.98 E-value=0.15 Score=54.09 Aligned_cols=105 Identities=11% Similarity=0.040 Sum_probs=66.2
Q ss_pred ccc-chHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCC-----------------CCEEEEEeCCHHHHHHHHHHH
Q 012954 117 IPV-MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPE-----------------LKLHIGVDVDPSALAKARAHL 178 (452)
Q Consensus 117 ~PV-Ll~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~-----------------~g~VigfDrD~~Ai~~Ak~rL 178 (452)
+|- +++-+++.+. +.++..++|.++|.||-...+++.+.. ...++|+|+|+.+++.|+.++
T Consensus 153 TP~~iv~~mv~~l~-p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl 231 (541)
T 2ar0_A 153 TPRPLIKTIIHLLK-PQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNC 231 (541)
T ss_dssp CCHHHHHHHHHHHC-CCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhc-cCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHH
Confidence 344 3444566665 467889999999999988877765321 125999999999999999877
Q ss_pred hhhccCCCCCCceEEEEccCcchHHHHHhhhcccccccCccEEEEccCCCccC
Q 012954 179 NSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQ 231 (452)
Q Consensus 179 ~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~l~~~~VDGILfDLGvSS~Q 231 (452)
.-.+... ....++.+++++.-..+. .. ...+|.||.|-=|+...
T Consensus 232 ~l~gi~~-~~~~~~~I~~gDtL~~~~--~~------~~~fD~Vv~NPPf~~~~ 275 (541)
T 2ar0_A 232 LLHDIEG-NLDHGGAIRLGNTLGSDG--EN------LPKAHIVATNPPFGSAA 275 (541)
T ss_dssp HTTTCCC-BGGGTBSEEESCTTSHHH--HT------SCCEEEEEECCCCTTCS
T ss_pred HHhCCCc-cccccCCeEeCCCccccc--cc------ccCCeEEEECCCccccc
Confidence 5433210 000014566666432211 01 23699999996665543
No 242
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=93.77 E-value=0.072 Score=47.08 Aligned_cols=48 Identities=15% Similarity=0.099 Sum_probs=38.0
Q ss_pred hHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCC-CCEEEEEeCCH
Q 012954 121 LGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPE-LKLHIGVDVDP 168 (452)
Q Consensus 121 l~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~-~g~VigfDrD~ 168 (452)
+.|+++.+....++..++|.-.|.|+.|..+++.+++ .++|+|+|+++
T Consensus 10 l~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~ 58 (201)
T 2plw_A 10 LIELDNKYLFLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKI 58 (201)
T ss_dssp HHHHHHHHCCCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSC
T ss_pred HHHHHHHcCCCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCc
Confidence 3445555432357789999999999999999999874 46899999997
No 243
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=93.58 E-value=0.16 Score=47.55 Aligned_cols=84 Identities=15% Similarity=0.228 Sum_probs=61.5
Q ss_pred cccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEc
Q 012954 117 IPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA 196 (452)
Q Consensus 117 ~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~ 196 (452)
.+-+.+++++.+. ..++..++|.-.|.|..+..+++ +. ..|+|+|.++.+++.|++++. ++.++.
T Consensus 42 ~~~~~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~--~~-~~v~gvD~s~~~~~~a~~~~~-----------~~~~~~ 106 (279)
T 3ccf_A 42 VWQYGEDLLQLLN-PQPGEFILDLGCGTGQLTEKIAQ--SG-AEVLGTDNAATMIEKARQNYP-----------HLHFDV 106 (279)
T ss_dssp CSSSCCHHHHHHC-CCTTCEEEEETCTTSHHHHHHHH--TT-CEEEEEESCHHHHHHHHHHCT-----------TSCEEE
T ss_pred HHHHHHHHHHHhC-CCCCCEEEEecCCCCHHHHHHHh--CC-CeEEEEECCHHHHHHHHhhCC-----------CCEEEE
Confidence 3557788888886 46888999999999999988887 33 579999999999999987641 344555
Q ss_pred cCcchHHHHHhhhcccccccCccEEEEcc
Q 012954 197 KNFRHIKSVLGQIDENILRSGVDAILMDL 225 (452)
Q Consensus 197 ~nF~~i~~~L~~~~~~l~~~~VDGILfDL 225 (452)
.+...+. . ...+|.|+...
T Consensus 107 ~d~~~~~-----~-----~~~fD~v~~~~ 125 (279)
T 3ccf_A 107 ADARNFR-----V-----DKPLDAVFSNA 125 (279)
T ss_dssp CCTTTCC-----C-----SSCEEEEEEES
T ss_pred CChhhCC-----c-----CCCcCEEEEcc
Confidence 6555431 0 13577777653
No 244
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=93.54 E-value=0.098 Score=51.56 Aligned_cols=64 Identities=11% Similarity=0.216 Sum_probs=50.4
Q ss_pred CCCCcccc-chHHHHhhccCCCCCCEEEEEccCCChhHHHHHHh-CCCCCEEEEEeCCHHHHHHHHHHHhhh
Q 012954 112 QQSSHIPV-MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRA-HPELKLHIGVDVDPSALAKARAHLNSL 181 (452)
Q Consensus 112 ~~~~H~PV-Ll~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~-~p~~g~VigfDrD~~Ai~~Ak~rL~~~ 181 (452)
.+....|+ |+..+|+... .+|++++|.-+|.| |+++... ++ .+.||+|+++.+.+.|++||...
T Consensus 232 ~~~~~kp~~l~~~~i~~~~--~~~~~VlDpF~GsG--tt~~aa~~~g--r~~ig~e~~~~~~~~~~~r~~~~ 297 (323)
T 1boo_A 232 AHPARFPAKLPEFFIRMLT--EPDDLVVDIFGGSN--TTGLVAERES--RKWISFEMKPEYVAASAFRFLDN 297 (323)
T ss_dssp CCSSCCCTHHHHHHHHHHC--CTTCEEEETTCTTC--HHHHHHHHTT--CEEEEEESCHHHHHHHHGGGSCS
T ss_pred CCCCcCCHHHHHHHHHHhC--CCCCEEEECCCCCC--HHHHHHHHcC--CCEEEEeCCHHHHHHHHHHHHhc
Confidence 35556776 8888888875 58999999999999 4444443 53 57899999999999999998765
No 245
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=93.44 E-value=0.3 Score=45.71 Aligned_cols=59 Identities=14% Similarity=0.121 Sum_probs=44.9
Q ss_pred CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccC
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKN 198 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~n 198 (452)
+...+++. |.| +|...|.+.+ .++|+++|.|++-.+.|++.++..+... ..+++++++.
T Consensus 30 ~a~~VLEi--GtG-ySTl~lA~~~-~g~VvtvE~d~~~~~~ar~~l~~~g~~~---~~~I~~~~gd 88 (202)
T 3cvo_A 30 EAEVILEY--GSG-GSTVVAAELP-GKHVTSVESDRAWARMMKAWLAANPPAE---GTEVNIVWTD 88 (202)
T ss_dssp HCSEEEEE--SCS-HHHHHHHTST-TCEEEEEESCHHHHHHHHHHHHHSCCCT---TCEEEEEECC
T ss_pred CCCEEEEE--Cch-HHHHHHHHcC-CCEEEEEeCCHHHHHHHHHHHHHcCCCC---CCceEEEEeC
Confidence 45678774 555 7888888865 5789999999999999999998765300 2378888776
No 246
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=93.39 E-value=0.28 Score=46.25 Aligned_cols=59 Identities=14% Similarity=0.141 Sum_probs=47.8
Q ss_pred hHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhcc
Q 012954 121 LGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLH 183 (452)
Q Consensus 121 l~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~ 183 (452)
-.++.+++. +.+.++|.-+|.|-=+..++...|.. .|+|+|+|+.+++.|++++...+.
T Consensus 40 Y~~~~~~l~---~~~~VLDlGCG~GplAl~l~~~~p~a-~~~A~Di~~~~leiar~~~~~~g~ 98 (200)
T 3fzg_A 40 YTYVFGNIK---HVSSILDFGCGFNPLALYQWNENEKI-IYHAYDIDRAEIAFLSSIIGKLKT 98 (200)
T ss_dssp HHHHHHHSC---CCSEEEEETCTTHHHHHHHHCSSCCC-EEEEECSCHHHHHHHHHHHHHSCC
T ss_pred HHHHHhhcC---CCCeEEEecCCCCHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCC
Confidence 445556663 56799999999997777777767776 899999999999999999887653
No 247
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=93.37 E-value=0.15 Score=46.03 Aligned_cols=43 Identities=21% Similarity=0.356 Sum_probs=38.5
Q ss_pred CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHH
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHL 178 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL 178 (452)
++..++|.-.|.|.++..+++..+ .++|+|.++.+++.|++++
T Consensus 40 ~~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~ 82 (239)
T 3bxo_A 40 EASSLLDVACGTGTHLEHFTKEFG---DTAGLELSEDMLTHARKRL 82 (239)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHHS---EEEEEESCHHHHHHHHHHC
T ss_pred CCCeEEEecccCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhC
Confidence 678999999999999999998854 6999999999999998864
No 248
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=93.36 E-value=0.087 Score=50.36 Aligned_cols=68 Identities=15% Similarity=0.153 Sum_probs=50.8
Q ss_pred CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhccc
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDEN 212 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~ 212 (452)
.++.++|+=+|.|..+..+.+.. ..|+|+|.++.+++.|++ ..++.++++++.++.
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~~---~~v~gvD~s~~ml~~a~~------------~~~v~~~~~~~e~~~--------- 94 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEFF---ERVHAVDPGEAQIRQALR------------HPRVTYAVAPAEDTG--------- 94 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTTC---SEEEEEESCHHHHHTCCC------------CTTEEEEECCTTCCC---------
T ss_pred CCCCEEEEcCCCCHHHHHHHHhC---CEEEEEeCcHHhhhhhhh------------cCCceeehhhhhhhc---------
Confidence 45789999999998888887653 469999999999987643 126778888876542
Q ss_pred ccccCccEEEEc
Q 012954 213 ILRSGVDAILMD 224 (452)
Q Consensus 213 l~~~~VDGILfD 224 (452)
+..+.+|.|+.-
T Consensus 95 ~~~~sfD~v~~~ 106 (257)
T 4hg2_A 95 LPPASVDVAIAA 106 (257)
T ss_dssp CCSSCEEEEEEC
T ss_pred ccCCcccEEEEe
Confidence 123468988874
No 249
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=93.29 E-value=0.038 Score=56.37 Aligned_cols=75 Identities=15% Similarity=0.110 Sum_probs=54.8
Q ss_pred CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhccc
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDEN 212 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~ 212 (452)
+|.+++|.=.|.|--|.... +.+- .+|||+|.++ +++.|++.++..+. ..++++++++-.++. .
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa-~aGA-~~V~ave~s~-~~~~a~~~~~~n~~-----~~~i~~i~~~~~~~~-----l--- 146 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCA-QAGA-RRVYAVEASA-IWQQAREVVRFNGL-----EDRVHVLPGPVETVE-----L--- 146 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHH-HTTC-SEEEEEECST-THHHHHHHHHHTTC-----TTTEEEEESCTTTCC-----C---
T ss_pred CCCEEEEeCCCccHHHHHHH-HhCC-CEEEEEeChH-HHHHHHHHHHHcCC-----CceEEEEeeeeeeec-----C---
Confidence 68899999999997765444 4444 4799999996 66888887776554 347999998876641 1
Q ss_pred ccccCccEEEEcc
Q 012954 213 ILRSGVDAILMDL 225 (452)
Q Consensus 213 l~~~~VDGILfDL 225 (452)
..++|.|+-++
T Consensus 147 --pe~~DvivsE~ 157 (376)
T 4hc4_A 147 --PEQVDAIVSEW 157 (376)
T ss_dssp --SSCEEEEECCC
T ss_pred --CccccEEEeec
Confidence 24799887643
No 250
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=93.16 E-value=0.17 Score=45.01 Aligned_cols=77 Identities=13% Similarity=0.097 Sum_probs=54.7
Q ss_pred hHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcc
Q 012954 121 LGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFR 200 (452)
Q Consensus 121 l~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~ 200 (452)
..+++..+. . ++..++|.-.|.|..+..+ ....++|+|.++.+++.|++++. ++.+++.++.
T Consensus 26 ~~~~l~~~~-~-~~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~~-----------~~~~~~~d~~ 87 (211)
T 2gs9_A 26 EERALKGLL-P-PGESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRAP-----------EATWVRAWGE 87 (211)
T ss_dssp HHHHHHTTC-C-CCSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHCT-----------TSEEECCCTT
T ss_pred HHHHHHHhc-C-CCCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhCC-----------CcEEEEcccc
Confidence 345666664 3 7889999999999877766 22279999999999999988651 3556777765
Q ss_pred hHHHHHhhhcccccccCccEEEEc
Q 012954 201 HIKSVLGQIDENILRSGVDAILMD 224 (452)
Q Consensus 201 ~i~~~L~~~~~~l~~~~VDGILfD 224 (452)
++. . ....+|.|++.
T Consensus 88 ~~~-----~----~~~~fD~v~~~ 102 (211)
T 2gs9_A 88 ALP-----F----PGESFDVVLLF 102 (211)
T ss_dssp SCC-----S----CSSCEEEEEEE
T ss_pred cCC-----C----CCCcEEEEEEc
Confidence 531 1 12368888865
No 251
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=93.10 E-value=0.15 Score=45.28 Aligned_cols=58 Identities=16% Similarity=0.179 Sum_probs=46.5
Q ss_pred ccccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHH
Q 012954 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHL 178 (452)
Q Consensus 116 H~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL 178 (452)
+...+..++++.+. .++..++|.-.|.|..+..+++. + ..++|+|.++.+++.+++++
T Consensus 17 ~~~~~~~~l~~~~~--~~~~~vLdiG~G~G~~~~~l~~~-~--~~~~~~D~~~~~~~~~~~~~ 74 (230)
T 3cc8_A 17 YYNAVNPNLLKHIK--KEWKEVLDIGCSSGALGAAIKEN-G--TRVSGIEAFPEAAEQAKEKL 74 (230)
T ss_dssp ---CCCHHHHTTCC--TTCSEEEEETCTTSHHHHHHHTT-T--CEEEEEESSHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHhc--cCCCcEEEeCCCCCHHHHHHHhc-C--CeEEEEeCCHHHHHHHHHhC
Confidence 34446778888885 47889999999999999988877 4 57999999999999998654
No 252
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=93.07 E-value=0.092 Score=57.44 Aligned_cols=94 Identities=12% Similarity=0.068 Sum_probs=64.1
Q ss_pred ccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhC----C-------------------------------------
Q 012954 118 PVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAH----P------------------------------------- 156 (452)
Q Consensus 118 PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~----p------------------------------------- 156 (452)
+.|..-++.... ..++..++|-.+|.|+=........ |
T Consensus 176 e~LAa~ll~~~~-~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~ 254 (703)
T 3v97_A 176 ETLAAAIVMRSG-WQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAE 254 (703)
T ss_dssp HHHHHHHHHHTT-CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhC-CCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhcccc
Confidence 345555555554 4578899999999997655444321 1
Q ss_pred CCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhcccccccCccEEEEc
Q 012954 157 ELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMD 224 (452)
Q Consensus 157 ~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~l~~~~VDGILfD 224 (452)
....++|+|+|+.|++.|+++++..+. ...+++.+.++.++. ... ....+|.|+.|
T Consensus 255 ~~~~i~G~Did~~av~~A~~N~~~agv-----~~~i~~~~~D~~~~~---~~~----~~~~~d~Iv~N 310 (703)
T 3v97_A 255 YSSHFYGSDSDARVIQRARTNARLAGI-----GELITFEVKDVAQLT---NPL----PKGPYGTVLSN 310 (703)
T ss_dssp CCCCEEEEESCHHHHHHHHHHHHHTTC-----GGGEEEEECCGGGCC---CSC----TTCCCCEEEEC
T ss_pred CCccEEEEECCHHHHHHHHHHHHHcCC-----CCceEEEECChhhCc---ccc----ccCCCCEEEeC
Confidence 113599999999999999999887654 235888888887642 000 01258899998
No 253
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=92.94 E-value=0.02 Score=55.15 Aligned_cols=85 Identities=14% Similarity=0.065 Sum_probs=54.5
Q ss_pred hHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEE--ccC
Q 012954 121 LGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTF--AKN 198 (452)
Q Consensus 121 l~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li--~~n 198 (452)
+.++++... ..++..++|.-+|.||.|..+++. ++|+|+|+++. +..+++. .... +....++.++ +++
T Consensus 63 L~~i~~~~~-~~~g~~VLDlGcGtG~~s~~la~~----~~V~gvD~s~m-~~~a~~~--~~~~--~~~~~~v~~~~~~~D 132 (265)
T 2oxt_A 63 LAWMEERGY-VELTGRVVDLGCGRGGWSYYAASR----PHVMDVRAYTL-GVGGHEV--PRIT--ESYGWNIVKFKSRVD 132 (265)
T ss_dssp HHHHHHHTS-CCCCEEEEEESCTTSHHHHHHHTS----TTEEEEEEECC-CCSSCCC--CCCC--CBTTGGGEEEECSCC
T ss_pred HHHHHHcCC-CCCCCEEEEeCcCCCHHHHHHHHc----CcEEEEECchh-hhhhhhh--hhhh--hccCCCeEEEecccC
Confidence 556666532 457889999999999999998876 46999999983 2222110 0000 0001156777 777
Q ss_pred cchHHHHHhhhcccccccCccEEEEccC
Q 012954 199 FRHIKSVLGQIDENILRSGVDAILMDLG 226 (452)
Q Consensus 199 F~~i~~~L~~~~~~l~~~~VDGILfDLG 226 (452)
+.++. ...+|.|+.|++
T Consensus 133 ~~~l~-----------~~~fD~V~sd~~ 149 (265)
T 2oxt_A 133 IHTLP-----------VERTDVIMCDVG 149 (265)
T ss_dssp TTTSC-----------CCCCSEEEECCC
T ss_pred HhHCC-----------CCCCcEEEEeCc
Confidence 76531 136999999976
No 254
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=92.84 E-value=0.026 Score=54.79 Aligned_cols=85 Identities=15% Similarity=0.051 Sum_probs=55.0
Q ss_pred hHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEE--ccC
Q 012954 121 LGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTF--AKN 198 (452)
Q Consensus 121 l~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li--~~n 198 (452)
+.++++... ..++..++|.-+|.||.|..+++. ++|+|+|+++. +..+++. .... +....++.++ +++
T Consensus 71 L~~i~~~~~-~~~g~~VLDlGcGtG~~s~~la~~----~~V~gVD~s~m-~~~a~~~--~~~~--~~~~~~v~~~~~~~D 140 (276)
T 2wa2_A 71 LAWIDERGG-VELKGTVVDLGCGRGSWSYYAASQ----PNVREVKAYTL-GTSGHEK--PRLV--ETFGWNLITFKSKVD 140 (276)
T ss_dssp HHHHHHTTS-CCCCEEEEEESCTTCHHHHHHHTS----TTEEEEEEECC-CCTTSCC--CCCC--CCTTGGGEEEECSCC
T ss_pred HHHHHHcCC-CCCCCEEEEeccCCCHHHHHHHHc----CCEEEEECchh-hhhhhhc--hhhh--hhcCCCeEEEeccCc
Confidence 556666532 357889999999999999998876 46999999983 2222111 0000 0011256777 777
Q ss_pred cchHHHHHhhhcccccccCccEEEEccC
Q 012954 199 FRHIKSVLGQIDENILRSGVDAILMDLG 226 (452)
Q Consensus 199 F~~i~~~L~~~~~~l~~~~VDGILfDLG 226 (452)
+.++. ...+|.|+.|++
T Consensus 141 ~~~l~-----------~~~fD~Vvsd~~ 157 (276)
T 2wa2_A 141 VTKME-----------PFQADTVLCDIG 157 (276)
T ss_dssp GGGCC-----------CCCCSEEEECCC
T ss_pred HhhCC-----------CCCcCEEEECCC
Confidence 76531 136999999875
No 255
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=92.72 E-value=0.32 Score=49.59 Aligned_cols=85 Identities=13% Similarity=0.116 Sum_probs=57.1
Q ss_pred CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccC-CCCC-CceEEEEccC-cchHHHHHhhh
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHG-QAHP-HLKTHTFAKN-FRHIKSVLGQI 209 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~-~~~~-~~r~~li~~n-F~~i~~~L~~~ 209 (452)
+...++|.=.|.|+-+..+|+.. . .+|.++|+|+.+++.|++.+...... .+.+ ..+++++.++ +..+.+....
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~-~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~- 264 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLK-P-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKE- 264 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTC-C-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHH-
T ss_pred CCCEEEEEECChhHHHHHHHHCC-C-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhcc-
Confidence 45789999999999999898764 4 57999999999999999987532110 0000 1267777765 3333322211
Q ss_pred cccccccCccEEEEcc
Q 012954 210 DENILRSGVDAILMDL 225 (452)
Q Consensus 210 ~~~l~~~~VDGILfDL 225 (452)
...+|.|+.|+
T Consensus 265 -----~~~fDvII~D~ 275 (364)
T 2qfm_A 265 -----GREFDYVINDL 275 (364)
T ss_dssp -----TCCEEEEEEEC
T ss_pred -----CCCceEEEECC
Confidence 13699999996
No 256
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=92.62 E-value=0.26 Score=48.71 Aligned_cols=74 Identities=18% Similarity=0.143 Sum_probs=57.4
Q ss_pred ccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEcc
Q 012954 118 PVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAK 197 (452)
Q Consensus 118 PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~ 197 (452)
.....++++.+. ..+...+||.=.|.|..+.+|++++|+. +++.+|. |.+++.|++.++..+ ..|++++.+
T Consensus 165 ~~~~~~~~~~~~-~~~~~~v~DvGgG~G~~~~~l~~~~p~~-~~~~~dl-p~v~~~a~~~~~~~~------~~rv~~~~g 235 (353)
T 4a6d_A 165 SVNGRSVLTAFD-LSVFPLMCDLGGGAGALAKECMSLYPGC-KITVFDI-PEVVWTAKQHFSFQE------EEQIDFQEG 235 (353)
T ss_dssp HHHHHHHHHSSC-GGGCSEEEEETCTTSHHHHHHHHHCSSC-EEEEEEC-HHHHHHHHHHSCC--------CCSEEEEES
T ss_pred HHHHHHHHHhcC-cccCCeEEeeCCCCCHHHHHHHHhCCCc-eeEeccC-HHHHHHHHHhhhhcc------cCceeeecC
Confidence 334567777775 4467899999999999999999999986 5889997 889999998765432 347888888
Q ss_pred Ccc
Q 012954 198 NFR 200 (452)
Q Consensus 198 nF~ 200 (452)
+|-
T Consensus 236 D~~ 238 (353)
T 4a6d_A 236 DFF 238 (353)
T ss_dssp CTT
T ss_pred ccc
Confidence 763
No 257
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=92.54 E-value=0.094 Score=50.31 Aligned_cols=75 Identities=7% Similarity=-0.088 Sum_probs=54.4
Q ss_pred CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhccc
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDEN 212 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~ 212 (452)
....++|.-.|.|+-+..+|+. + .+|+++|+|+.+++.|++.+....... ...+++++.++-... +
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~-~--~~v~~veid~~~i~~ar~~~~~~~~~~--~~~rv~~~~~D~~~~---~------ 137 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY-D--THIDFVQADEKILDSFISFFPHFHEVK--NNKNFTHAKQLLDLD---I------ 137 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS-S--CEEEEECSCHHHHGGGTTTSTTHHHHH--TCTTEEEESSGGGSC---C------
T ss_pred CCCEEEEEeCCcCHHHHHHHhC-C--CEEEEEECCHHHHHHHHHHHHhhcccc--CCCeEEEEechHHHH---H------
Confidence 3478999999999999999987 5 579999999999999988764321000 013677776654321 1
Q ss_pred ccccCccEEEEc
Q 012954 213 ILRSGVDAILMD 224 (452)
Q Consensus 213 l~~~~VDGILfD 224 (452)
..+|.|+.|
T Consensus 138 ---~~fD~Ii~d 146 (262)
T 2cmg_A 138 ---KKYDLIFCL 146 (262)
T ss_dssp ---CCEEEEEES
T ss_pred ---hhCCEEEEC
Confidence 269999998
No 258
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=92.30 E-value=0.047 Score=53.61 Aligned_cols=85 Identities=19% Similarity=0.075 Sum_probs=53.9
Q ss_pred hHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeC----CHHHHHHHHHHHhhhccCCCCCCceEEEEc
Q 012954 121 LGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDV----DPSALAKARAHLNSLLHGQAHPHLKTHTFA 196 (452)
Q Consensus 121 l~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDr----D~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~ 196 (452)
|.++++.. ..+++..++|.-+|.||.|..+++. +.|+|+|. .+..++.. ..+.. +..++++++
T Consensus 71 L~~i~~~~-~~~~g~~VLDlGcG~G~~s~~la~~----~~V~gvD~~~~~~~~~~~~~--~~~~~------~~~~v~~~~ 137 (305)
T 2p41_A 71 LRWFVERN-LVTPEGKVVDLGCGRGGWSYYCGGL----KNVREVKGLTKGGPGHEEPI--PMSTY------GWNLVRLQS 137 (305)
T ss_dssp HHHHHHTT-SSCCCEEEEEETCTTSHHHHHHHTS----TTEEEEEEECCCSTTSCCCC--CCCST------TGGGEEEEC
T ss_pred HHHHHHcC-CCCCCCEEEEEcCCCCHHHHHHHhc----CCEEEEeccccCchhHHHHH--Hhhhc------CCCCeEEEe
Confidence 34444442 2357889999999999999998876 35999999 43222110 01111 113678887
Q ss_pred c-CcchHHHHHhhhcccccccCccEEEEccCCCc
Q 012954 197 K-NFRHIKSVLGQIDENILRSGVDAILMDLGMSS 229 (452)
Q Consensus 197 ~-nF~~i~~~L~~~~~~l~~~~VDGILfDLGvSS 229 (452)
+ ++..+. ...+|.|+.|.+.++
T Consensus 138 ~~D~~~l~-----------~~~fD~V~sd~~~~~ 160 (305)
T 2p41_A 138 GVDVFFIP-----------PERCDTLLCDIGESS 160 (305)
T ss_dssp SCCTTTSC-----------CCCCSEEEECCCCCC
T ss_pred ccccccCC-----------cCCCCEEEECCcccc
Confidence 7 655421 236999999987753
No 259
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=91.97 E-value=0.12 Score=47.31 Aligned_cols=47 Identities=13% Similarity=-0.075 Sum_probs=39.4
Q ss_pred CCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhh
Q 012954 132 RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNS 180 (452)
Q Consensus 132 ~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~ 180 (452)
.++..++|.-+|.|.++..+++... ..|+|+|.++.+++.|++++..
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~ 101 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESF--TEIIVSDYTDQNLWELQKWLKK 101 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHTT
T ss_pred cCCCEEEEECCCccHHHHHHhhccc--CeEEEecCCHHHHHHHHHHHhc
Confidence 4667899999999988888776543 3699999999999999988754
No 260
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=91.03 E-value=0.22 Score=49.35 Aligned_cols=65 Identities=15% Similarity=0.211 Sum_probs=47.7
Q ss_pred CCCCcccc-chHHHHhhccCCCCCCEEEEEccCCChhHHHHHHh-CCCCCEEEEEeCCH---HHHHHHHHHHhhhc
Q 012954 112 QQSSHIPV-MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRA-HPELKLHIGVDVDP---SALAKARAHLNSLL 182 (452)
Q Consensus 112 ~~~~H~PV-Ll~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~-~p~~g~VigfDrD~---~Ai~~Ak~rL~~~~ 182 (452)
.+....|+ |+..+|.... .++++++|.-+|.| |.++... ++ .+.||+|+++ +.++.|++||...+
T Consensus 222 ~~~~~kp~~l~~~~i~~~~--~~~~~vlDpF~GsG--tt~~aa~~~~--r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 222 GHPTQKPAAVIERLVRALS--HPGSTVLDFFAGSG--VTARVAIQEG--RNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp SCTTCCCHHHHHHHHHHHS--CTTCEEEETTCTTC--HHHHHHHHHT--CEEEEEESSTHHHHHHHHHHHHC----
T ss_pred CCCCCCCHHHHHHHHHHhC--CCCCEEEecCCCCC--HHHHHHHHcC--CcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 34456777 8888888875 58999999999999 3333333 43 5789999999 99999999987654
No 261
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=90.86 E-value=0.49 Score=43.90 Aligned_cols=53 Identities=19% Similarity=0.104 Sum_probs=41.9
Q ss_pred hHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHH
Q 012954 121 LGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHL 178 (452)
Q Consensus 121 l~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL 178 (452)
+.+.+..+. . ++..++|.-+|.|..+..+++. ...++|+|.++.+++.|+++.
T Consensus 44 ~~~~l~~~~-~-~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~ 96 (260)
T 2avn_A 44 IGSFLEEYL-K-NPCRVLDLGGGTGKWSLFLQER---GFEVVLVDPSKEMLEVAREKG 96 (260)
T ss_dssp HHHHHHHHC-C-SCCEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHHT
T ss_pred HHHHHHHhc-C-CCCeEEEeCCCcCHHHHHHHHc---CCeEEEEeCCHHHHHHHHhhc
Confidence 344444443 2 6789999999999999988876 246999999999999998764
No 262
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=89.74 E-value=0.28 Score=48.92 Aligned_cols=59 Identities=19% Similarity=0.173 Sum_probs=49.5
Q ss_pred CccccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHH
Q 012954 115 SHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAH 177 (452)
Q Consensus 115 ~H~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~r 177 (452)
.|..-+.+.+++.+. ..++..++|.-.|.|..+..+.+.. ..|+|+|.++.+++.|+++
T Consensus 90 ~~~~~~~~~l~~~~~-~~~~~~VLDiGcG~G~~~~~l~~~g---~~v~gvD~s~~~~~~a~~~ 148 (416)
T 4e2x_A 90 EHFAMLARDFLATEL-TGPDPFIVEIGCNDGIMLRTIQEAG---VRHLGFEPSSGVAAKAREK 148 (416)
T ss_dssp HHHHHHHHHHHHTTT-CSSSCEEEEETCTTTTTHHHHHHTT---CEEEEECCCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhC-CCCCCEEEEecCCCCHHHHHHHHcC---CcEEEECCCHHHHHHHHHc
Confidence 366667888888886 4578899999999999998888752 3699999999999999875
No 263
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=88.97 E-value=0.22 Score=46.72 Aligned_cols=47 Identities=9% Similarity=-0.057 Sum_probs=38.2
Q ss_pred CCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhh
Q 012954 132 RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNS 180 (452)
Q Consensus 132 ~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~ 180 (452)
.++..++|.-+|.|.|+...+... ...|+|+|.++.+++.|+++++.
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~~--~~~v~g~D~s~~~l~~a~~~~~~ 100 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACDS--FQDITLSDFTDRNREELEKWLKK 100 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGT--EEEEEEEESCHHHHHHHHHHHHT
T ss_pred CCCceEEEeCCCccHHHHHHHHhh--hcceeeccccHHHHHHHHHHHhc
Confidence 367789999999998887655442 23699999999999999998764
No 264
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=88.00 E-value=0.8 Score=48.69 Aligned_cols=87 Identities=14% Similarity=0.069 Sum_probs=60.4
Q ss_pred CCCCEEEEEccCCChhHHHHHHhCC--CCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhh
Q 012954 132 RTITSFVDCTLGAAGHSSAIIRAHP--ELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQI 209 (452)
Q Consensus 132 ~~ggiyVDaTlG~GGHS~aIL~~~p--~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~ 209 (452)
.++..++|-++|.||-..++++.+. ....++|+|+|+.++..|+.++.-.+.. ..++.+.++++-..+ +...
T Consensus 220 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~----~~~~~I~~gDtL~~d--~p~~ 293 (542)
T 3lkd_A 220 KQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVP----IENQFLHNADTLDED--WPTQ 293 (542)
T ss_dssp CTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCC----GGGEEEEESCTTTSC--SCCS
T ss_pred CCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCC----cCccceEecceeccc--cccc
Confidence 4678999999999999888888753 2357999999999999998876544321 135667777642210 0000
Q ss_pred cccccccCccEEEEccCCC
Q 012954 210 DENILRSGVDAILMDLGMS 228 (452)
Q Consensus 210 ~~~l~~~~VDGILfDLGvS 228 (452)
....+|.||.|-=|+
T Consensus 294 ----~~~~fD~IvaNPPf~ 308 (542)
T 3lkd_A 294 ----EPTNFDGVLMNPPYS 308 (542)
T ss_dssp ----SCCCBSEEEECCCTT
T ss_pred ----ccccccEEEecCCcC
Confidence 124689999987776
No 265
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=87.70 E-value=0.48 Score=44.66 Aligned_cols=58 Identities=10% Similarity=0.004 Sum_probs=42.0
Q ss_pred hHHHHhhccCC-CCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhh
Q 012954 121 LGEVLDVFSSS-RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNS 180 (452)
Q Consensus 121 l~Evl~~L~~~-~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~ 180 (452)
+..+++.|... .++..++|.-+|.|. ...++...+. ..|+|+|+.+.+++.|+++++.
T Consensus 58 ~~~l~~~l~~~~~~~~~vLDiGcG~G~-~~~l~~~~~~-~~v~gvD~s~~~l~~a~~~~~~ 116 (289)
T 2g72_A 58 LRCLAQTFATGEVSGRTLIDIGSGPTV-YQLLSACSHF-EDITMTDFLEVNRQELGRWLQE 116 (289)
T ss_dssp HHHHHHHHHTSCSCCSEEEEETCTTCC-GGGTTGGGGC-SEEEEECSCHHHHHHHHHHHTT
T ss_pred HHHHHHHhCCCCCCCCeEEEECCCcCh-HHHHhhccCC-CeEEEeCCCHHHHHHHHHHHhh
Confidence 55666666421 267899999999997 4344444333 4799999999999999987754
No 266
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=87.47 E-value=0.63 Score=46.14 Aligned_cols=67 Identities=19% Similarity=0.354 Sum_probs=50.2
Q ss_pred chHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCc
Q 012954 120 MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNF 199 (452)
Q Consensus 120 Ll~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF 199 (452)
+..++++.+....+...++|.-.|.|..+..|++++|.. +++++|. +.+++.|++. .+++++.++|
T Consensus 190 ~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~~~------------~~v~~~~~d~ 255 (368)
T 3reo_A 190 TMKKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSI-NAINFDL-PHVIQDAPAF------------SGVEHLGGDM 255 (368)
T ss_dssp HHHHHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTTC-EEEEEEC-HHHHTTCCCC------------TTEEEEECCT
T ss_pred HHHHHHHhcccccCCCEEEEeCCCcCHHHHHHHHhCCCC-EEEEEeh-HHHHHhhhhc------------CCCEEEecCC
Confidence 456777776423467899999999999999999999885 6899999 8888765421 2566666665
Q ss_pred c
Q 012954 200 R 200 (452)
Q Consensus 200 ~ 200 (452)
.
T Consensus 256 ~ 256 (368)
T 3reo_A 256 F 256 (368)
T ss_dssp T
T ss_pred C
Confidence 3
No 267
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=87.32 E-value=2.2 Score=44.99 Aligned_cols=62 Identities=10% Similarity=0.061 Sum_probs=46.9
Q ss_pred CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHH
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIK 203 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~ 203 (452)
.+..++|.=+|+|-.|..+.+. + ..|.|+|..+.+|+.|+.+..+.+ ..++.+.+.+-+++.
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~-g--a~V~giD~~~~~i~~a~~~a~~~~------~~~~~~~~~~~~~~~ 127 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASK-G--ATIVGIDFQQENINVCRALAEENP------DFAAEFRVGRIEEVI 127 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHT-T--CEEEEEESCHHHHHHHHHHHHTST------TSEEEEEECCHHHHH
T ss_pred CCCeEEEECCCCcHHHHHHHhC-C--CEEEEECCCHHHHHHHHHHHHhcC------CCceEEEECCHHHHh
Confidence 3468999999999988888764 3 469999999999999998765432 235667677666553
No 268
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=87.27 E-value=1.2 Score=44.05 Aligned_cols=80 Identities=14% Similarity=0.142 Sum_probs=52.8
Q ss_pred CEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccC-cchHHHHHhhhcccc
Q 012954 135 TSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKN-FRHIKSVLGQIDENI 213 (452)
Q Consensus 135 giyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~n-F~~i~~~L~~~~~~l 213 (452)
..++=.=.|.||=..++|+. ++..+|..+|+|+..++.|++.|...... .....|++++.+. +.. +++.
T Consensus 85 k~VLIiGgGdG~~~revlk~-~~v~~v~~VEID~~Vv~~a~~~lp~~~~~-~~~dpRv~v~~~Dg~~~----l~~~---- 154 (294)
T 3o4f_A 85 KHVLIIGGGDGAMLREVTRH-KNVESITMVEIDAGVVSFCRQYLPNHNAG-SYDDPRFKLVIDDGVNF----VNQT---- 154 (294)
T ss_dssp CEEEEESCTTSHHHHHHHTC-TTCCEEEEEESCHHHHHHHHHHCHHHHTT-GGGCTTEEEEESCTTTT----TSCS----
T ss_pred CeEEEECCCchHHHHHHHHc-CCcceEEEEcCCHHHHHHHHhcCcccccc-ccCCCcEEEEechHHHH----Hhhc----
Confidence 44555567788888888865 44457999999999999999876432110 0002377776654 443 3332
Q ss_pred cccCccEEEEcc
Q 012954 214 LRSGVDAILMDL 225 (452)
Q Consensus 214 ~~~~VDGILfDL 225 (452)
...+|.|+.|+
T Consensus 155 -~~~yDvIi~D~ 165 (294)
T 3o4f_A 155 -SQTFDVIISDC 165 (294)
T ss_dssp -SCCEEEEEESC
T ss_pred -cccCCEEEEeC
Confidence 24799999996
No 269
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=87.22 E-value=0.72 Score=45.73 Aligned_cols=67 Identities=15% Similarity=0.288 Sum_probs=50.3
Q ss_pred chHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCc
Q 012954 120 MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNF 199 (452)
Q Consensus 120 Ll~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF 199 (452)
+...+++.+....+...++|.-.|.|..+..|++++|.. +++++|. |.+++.|++. .+++++..+|
T Consensus 188 ~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~~~------------~~v~~~~~D~ 253 (364)
T 3p9c_A 188 ITKKLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTI-KGVNFDL-PHVISEAPQF------------PGVTHVGGDM 253 (364)
T ss_dssp HHHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTC-EEEEEEC-HHHHTTCCCC------------TTEEEEECCT
T ss_pred HHHHHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCC-eEEEecC-HHHHHhhhhc------------CCeEEEeCCc
Confidence 356677776423467899999999999999999999885 6899999 8887665421 2566666665
Q ss_pred c
Q 012954 200 R 200 (452)
Q Consensus 200 ~ 200 (452)
.
T Consensus 254 ~ 254 (364)
T 3p9c_A 254 F 254 (364)
T ss_dssp T
T ss_pred C
Confidence 3
No 270
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=87.12 E-value=0.71 Score=45.10 Aligned_cols=69 Identities=17% Similarity=0.151 Sum_probs=48.7
Q ss_pred hHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCc
Q 012954 121 LGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNF 199 (452)
Q Consensus 121 l~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF 199 (452)
..++++.+. ..++..++|.-.|.|..+..+++++|.. +++++|. +..+. +++++..+. ..+++++..+|
T Consensus 173 ~~~~~~~~~-~~~~~~vLDvG~G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~--~~~~~~~~~-----~~~v~~~~~d~ 241 (348)
T 3lst_A 173 HLILARAGD-FPATGTVADVGGGRGGFLLTVLREHPGL-QGVLLDR-AEVVA--RHRLDAPDV-----AGRWKVVEGDF 241 (348)
T ss_dssp HHHHHHHSC-CCSSEEEEEETCTTSHHHHHHHHHCTTE-EEEEEEC-HHHHT--TCCCCCGGG-----TTSEEEEECCT
T ss_pred HHHHHHhCC-ccCCceEEEECCccCHHHHHHHHHCCCC-EEEEecC-HHHhh--cccccccCC-----CCCeEEEecCC
Confidence 557777775 4577899999999999999999999874 6899999 55554 222222221 23566666666
No 271
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=86.77 E-value=0.26 Score=48.15 Aligned_cols=90 Identities=13% Similarity=0.034 Sum_probs=62.9
Q ss_pred hHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEcc-Cc
Q 012954 121 LGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAK-NF 199 (452)
Q Consensus 121 l~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~-nF 199 (452)
|.|+.+-+. .++++.+||...+-||-|...+...+.. +|+|+|+-..-.+.- ...+.|+ -+-+++..+ ++
T Consensus 67 L~ei~ek~~-l~~g~~VvDLGaapGGWSq~~a~~~g~~-~V~avdvG~~ghe~P-~~~~s~g------wn~v~fk~gvDv 137 (267)
T 3p8z_A 67 LQWFVERNM-VIPEGRVIDLGCGRGGWSYYCAGLKKVT-EVRGYTKGGPGHEEP-VPMSTYG------WNIVKLMSGKDV 137 (267)
T ss_dssp HHHHHHTTS-SCCCEEEEEESCTTSHHHHHHHTSTTEE-EEEEECCCSTTSCCC-CCCCCTT------TTSEEEECSCCG
T ss_pred HHHHHHhcC-CCCCCEEEEcCCCCCcHHHHHHHhcCCC-EEEEEecCCCCccCc-chhhhcC------cCceEEEeccce
Confidence 788888885 5799999999999999999888776654 799999985432100 0112232 235777776 65
Q ss_pred chHHHHHhhhcccccccCccEEEEccCCCcc
Q 012954 200 RHIKSVLGQIDENILRSGVDAILMDLGMSSM 230 (452)
Q Consensus 200 ~~i~~~L~~~~~~l~~~~VDGILfDLGvSS~ 230 (452)
..+ . ...+|-||-|+|=||.
T Consensus 138 ~~~----~-------~~~~DtllcDIgeSs~ 157 (267)
T 3p8z_A 138 FYL----P-------PEKCDTLLCDIGESSP 157 (267)
T ss_dssp GGC----C-------CCCCSEEEECCCCCCS
T ss_pred eec----C-------CccccEEEEecCCCCC
Confidence 322 1 2469999999998774
No 272
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=86.50 E-value=1.4 Score=45.72 Aligned_cols=85 Identities=12% Similarity=0.171 Sum_probs=61.6
Q ss_pred cccchHHHHhhccCCCCCCEEEEEccC------CChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCC
Q 012954 117 IPVMLGEVLDVFSSSRTITSFVDCTLG------AAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPH 189 (452)
Q Consensus 117 ~PVLl~Evl~~L~~~~~ggiyVDaTlG------~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~ 189 (452)
+.-+.++.+..+. .+...++|.=+| .||.|..+++++ |+ +.|+|+|+++.+. . . .
T Consensus 202 y~~~Ye~lL~~l~--~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~-a~V~GVDiSp~m~-------~--~------~ 263 (419)
T 3sso_A 202 FTPHYDRHFRDYR--NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPR-GQIYGLDIMDKSH-------V--D------E 263 (419)
T ss_dssp CHHHHHHHHGGGT--TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTT-CEEEEEESSCCGG-------G--C------B
T ss_pred HHHHHHHHHHhhc--CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCC-CEEEEEECCHHHh-------h--c------C
Confidence 5557788887775 356899999999 688999999885 54 6899999998852 1 1 1
Q ss_pred ceEEEEccCcchHHHH--HhhhcccccccCccEEEEc
Q 012954 190 LKTHTFAKNFRHIKSV--LGQIDENILRSGVDAILMD 224 (452)
Q Consensus 190 ~r~~li~~nF~~i~~~--L~~~~~~l~~~~VDGILfD 224 (452)
.++++++++..++.-. +.+. ...+|.|+.|
T Consensus 264 ~rI~fv~GDa~dlpf~~~l~~~-----d~sFDlVisd 295 (419)
T 3sso_A 264 LRIRTIQGDQNDAEFLDRIARR-----YGPFDIVIDD 295 (419)
T ss_dssp TTEEEEECCTTCHHHHHHHHHH-----HCCEEEEEEC
T ss_pred CCcEEEEecccccchhhhhhcc-----cCCccEEEEC
Confidence 3789999998886422 2111 1369999876
No 273
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=85.66 E-value=3.1 Score=39.22 Aligned_cols=99 Identities=13% Similarity=-0.007 Sum_probs=59.0
Q ss_pred CCCCEEEEEccCCChhHHHHHHh----CCCCCEE--EEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHH
Q 012954 132 RTITSFVDCTLGAAGHSSAIIRA----HPELKLH--IGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSV 205 (452)
Q Consensus 132 ~~ggiyVDaTlG~GGHS~aIL~~----~p~~g~V--igfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~ 205 (452)
.++..++|.-.|.|.-|..+|+. .+. ..+ +|+|..+++++.|++++.....- ...++.+.......+..-
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~-~~v~~~~vD~S~~ml~~a~~~~~~~~~~---~~v~~~~~~~~~~~~~~~ 126 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPG-VCINNEVVEPSAEQIAKYKELVAKTSNL---ENVKFAWHKETSSEYQSR 126 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTT-CEEEEEEECSCHHHHHHHHHHHHTCSSC---TTEEEEEECSCHHHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCC-ceeeEEEEeCCHHHHHHHHHHHHhccCC---CcceEEEEecchhhhhhh
Confidence 45679999999999766656543 344 334 99999999999999987642110 012344445544433211
Q ss_pred HhhhcccccccCccEEEEccCCCccCCCCCCCCc
Q 012954 206 LGQIDENILRSGVDAILMDLGMSSMQVNNPERGF 239 (452)
Q Consensus 206 L~~~~~~l~~~~VDGILfDLGvSS~QLDd~~RGF 239 (452)
+.. + +....+|.|++-.. .++++|+.+.+
T Consensus 127 ~~~-~--~~~~~fD~V~~~~~--l~~~~d~~~~l 155 (292)
T 2aot_A 127 MLE-K--KELQKWDFIHMIQM--LYYVKDIPATL 155 (292)
T ss_dssp HHT-T--TCCCCEEEEEEESC--GGGCSCHHHHH
T ss_pred hcc-c--cCCCceeEEEEeee--eeecCCHHHHH
Confidence 100 0 01236888886543 46677766543
No 274
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=85.49 E-value=1.4 Score=45.21 Aligned_cols=83 Identities=12% Similarity=0.095 Sum_probs=53.2
Q ss_pred CEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccC-CCC-CCceEEEEcc-CcchHHHHHhhhcc
Q 012954 135 TSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHG-QAH-PHLKTHTFAK-NFRHIKSVLGQIDE 211 (452)
Q Consensus 135 giyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~-~~~-~~~r~~li~~-nF~~i~~~L~~~~~ 211 (452)
..++=.=.|.||=..++|+ ++. .+|..+|+|+..++.|++.+...... ... ...|++++.+ .+..+.+..++.
T Consensus 207 krVLIIGgGdG~~~revlk-h~~-~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~-- 282 (381)
T 3c6k_A 207 KDVLILGGGDGGILCEIVK-LKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG-- 282 (381)
T ss_dssp CEEEEEECTTCHHHHHHHT-TCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT--
T ss_pred CeEEEECCCcHHHHHHHHh-cCC-ceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhcc--
Confidence 4454466788888888986 455 57999999999999999876432110 000 0125666554 455555444321
Q ss_pred cccccCccEEEEcc
Q 012954 212 NILRSGVDAILMDL 225 (452)
Q Consensus 212 ~l~~~~VDGILfDL 225 (452)
..+|.|+.|+
T Consensus 283 ----~~yDvIIvDl 292 (381)
T 3c6k_A 283 ----REFDYVINDL 292 (381)
T ss_dssp ----CCEEEEEEEC
T ss_pred ----CceeEEEECC
Confidence 3699999996
No 275
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=85.41 E-value=0.82 Score=45.89 Aligned_cols=89 Identities=13% Similarity=0.041 Sum_probs=58.8
Q ss_pred hHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEcc-Cc
Q 012954 121 LGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAK-NF 199 (452)
Q Consensus 121 l~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~-nF 199 (452)
|.|+.+-.. .++++.+||...+-||-|...+...+.. +|+|+|+-..-.+.= ...++++- .-++++.. |+
T Consensus 83 L~ei~~~~~-l~~~~~VlDLGaapGGwsq~~~~~~gv~-~V~avdvG~~~he~P-~~~~ql~w------~lV~~~~~~Dv 153 (321)
T 3lkz_A 83 LRWLVERRF-LEPVGKVIDLGCGRGGWCYYMATQKRVQ-EVRGYTKGGPGHEEP-QLVQSYGW------NIVTMKSGVDV 153 (321)
T ss_dssp HHHHHHTTS-CCCCEEEEEETCTTCHHHHHHTTCTTEE-EEEEECCCSTTSCCC-CCCCBTTG------GGEEEECSCCT
T ss_pred HHHHHHhcC-CCCCCEEEEeCCCCCcHHHHHHhhcCCC-EEEEEEcCCCCccCc-chhhhcCC------cceEEEeccCH
Confidence 778888765 5789999999999999999777766553 799999984311000 00012211 13555555 65
Q ss_pred chHHHHHhhhcccccccCccEEEEccCCCc
Q 012954 200 RHIKSVLGQIDENILRSGVDAILMDLGMSS 229 (452)
Q Consensus 200 ~~i~~~L~~~~~~l~~~~VDGILfDLGvSS 229 (452)
.++. ...+|.||.|+|=||
T Consensus 154 ~~l~-----------~~~~D~ivcDigeSs 172 (321)
T 3lkz_A 154 FYRP-----------SECCDTLLCDIGESS 172 (321)
T ss_dssp TSSC-----------CCCCSEEEECCCCCC
T ss_pred hhCC-----------CCCCCEEEEECccCC
Confidence 4432 236999999999665
No 276
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=84.98 E-value=1.1 Score=44.15 Aligned_cols=67 Identities=18% Similarity=0.300 Sum_probs=50.2
Q ss_pred chHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCc
Q 012954 120 MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNF 199 (452)
Q Consensus 120 Ll~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF 199 (452)
.+.++++.+....++..++|.-.|.|..+..+++++|.. +++++|+ +.+++.|++. .+++++..+|
T Consensus 196 ~~~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~-~~~~~D~-~~~~~~a~~~------------~~v~~~~~d~ 261 (372)
T 1fp1_D 196 EMKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLI-KGINFDL-PQVIENAPPL------------SGIEHVGGDM 261 (372)
T ss_dssp HHHHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTC-EEEEEEC-HHHHTTCCCC------------TTEEEEECCT
T ss_pred HHHHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCC-eEEEeCh-HHHHHhhhhc------------CCCEEEeCCc
Confidence 356777776323467899999999999999999999875 6899999 9888766531 1466666666
Q ss_pred c
Q 012954 200 R 200 (452)
Q Consensus 200 ~ 200 (452)
.
T Consensus 262 ~ 262 (372)
T 1fp1_D 262 F 262 (372)
T ss_dssp T
T ss_pred c
Confidence 4
No 277
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=84.67 E-value=3.1 Score=42.02 Aligned_cols=82 Identities=9% Similarity=0.009 Sum_probs=65.1
Q ss_pred CCCCccccchHHHHhhccCCC-----CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCC
Q 012954 112 QQSSHIPVMLGEVLDVFSSSR-----TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQA 186 (452)
Q Consensus 112 ~~~~H~PVLl~Evl~~L~~~~-----~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~ 186 (452)
.++-+-|=+++.+++.+.... ++..+|++==|.|..|..||+.... ++|+++++|+.-+..-++.+ .+
T Consensus 32 QnFL~d~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~-~~vvavE~D~~l~~~L~~~~-~~----- 104 (353)
T 1i4w_A 32 FKYLWNPTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCP-RQYSLLEKRSSLYKFLNAKF-EG----- 104 (353)
T ss_dssp CCCBCCHHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCC-SEEEEECCCHHHHHHHHHHT-TT-----
T ss_pred cCccCCHHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCC-CEEEEEecCHHHHHHHHHhc-cC-----
Confidence 677788889999999996321 3589999999999999999987433 46999999999887766654 21
Q ss_pred CCCceEEEEccCcchHH
Q 012954 187 HPHLKTHTFAKNFRHIK 203 (452)
Q Consensus 187 ~~~~r~~li~~nF~~i~ 203 (452)
.+++++++++-.++
T Consensus 105 ---~~l~ii~~D~l~~~ 118 (353)
T 1i4w_A 105 ---SPLQILKRDPYDWS 118 (353)
T ss_dssp ---SSCEEECSCTTCHH
T ss_pred ---CCEEEEECCccchh
Confidence 37899999986655
No 278
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=84.66 E-value=1.3 Score=49.83 Aligned_cols=89 Identities=10% Similarity=0.047 Sum_probs=57.0
Q ss_pred CCCEEEEEccCCChhHHHHHHhCCC--CCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhc
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAHPE--LKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQID 210 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~p~--~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~ 210 (452)
++..++|-++|.|+=..++.+.++. ...++|+|+|+.|++.|+.++.-.......+.....+..++|.... ..
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~----~~- 395 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLN----PE- 395 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCC----GG-
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhccc----cc-
Confidence 5789999999999988888877652 2459999999999999954432211000001112345566664421 00
Q ss_pred ccccccCccEEEEccCCCc
Q 012954 211 ENILRSGVDAILMDLGMSS 229 (452)
Q Consensus 211 ~~l~~~~VDGILfDLGvSS 229 (452)
....+|.||.|-=|+.
T Consensus 396 ---~~~kFDVVIgNPPYg~ 411 (878)
T 3s1s_A 396 ---DFANVSVVVMNPPYVS 411 (878)
T ss_dssp ---GGTTEEEEEECCBCCS
T ss_pred ---ccCCCCEEEECCCccc
Confidence 1246999999988873
No 279
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=83.63 E-value=1.6 Score=46.18 Aligned_cols=96 Identities=14% Similarity=0.076 Sum_probs=59.5
Q ss_pred hHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCC------------CCEEEEEeCCHHHHHHHHHHHhhhccCCCCC
Q 012954 121 LGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPE------------LKLHIGVDVDPSALAKARAHLNSLLHGQAHP 188 (452)
Q Consensus 121 l~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~------------~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~ 188 (452)
++-+++.+. +.++..++|-++|.||=-.+..+.+.. ...++|+|+|+.+...|+-.+--.+..
T Consensus 206 v~lmv~l~~-p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~---- 280 (530)
T 3ufb_A 206 VRFMVEVMD-PQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLE---- 280 (530)
T ss_dssp HHHHHHHHC-CCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCS----
T ss_pred HHHHHHhhc-cCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCc----
Confidence 455556665 568889999999999987665543211 124899999999999998765443321
Q ss_pred CceEEEEccCcchHHHHHhhhcccccccCccEEEEccCCC
Q 012954 189 HLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMS 228 (452)
Q Consensus 189 ~~r~~li~~nF~~i~~~L~~~~~~l~~~~VDGILfDLGvS 228 (452)
...+.+++.=.. -+.+.+ ....+|.||.|-=|+
T Consensus 281 --~~~I~~~dtL~~--~~~~~~---~~~~fD~Il~NPPf~ 313 (530)
T 3ufb_A 281 --YPRIDPENSLRF--PLREMG---DKDRVDVILTNPPFG 313 (530)
T ss_dssp --CCEEECSCTTCS--CGGGCC---GGGCBSEEEECCCSS
T ss_pred --cccccccccccC--chhhhc---ccccceEEEecCCCC
Confidence 223445443110 011111 123689999887665
No 280
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=83.42 E-value=5.1 Score=38.99 Aligned_cols=83 Identities=10% Similarity=-0.070 Sum_probs=56.1
Q ss_pred CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhccc
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDEN 212 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~ 212 (452)
+.+.++|.-+|.|==+.+++ + ...|+|+|+|+.+++.+++.+...+. ++.+.+.++..- .
T Consensus 105 ~p~~VLDlGCG~gpLal~~~---~-~~~y~a~DId~~~i~~ar~~~~~~g~-------~~~~~v~D~~~~-----~---- 164 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYER---G-IASVWGCDIHQGLGDVITPFAREKDW-------DFTFALQDVLCA-----P---- 164 (253)
T ss_dssp CCSEEEEETCTTTHHHHHHT---T-CSEEEEEESBHHHHHHHHHHHHHTTC-------EEEEEECCTTTS-----C----
T ss_pred CCCeEEEecCCccHHHHHhc---c-CCeEEEEeCCHHHHHHHHHHHHhcCC-------CceEEEeecccC-----C----
Confidence 56899999999994444444 4 46799999999999999998766532 555555555421 1
Q ss_pred ccccCccEEEEccCCCccCCCCCCCC
Q 012954 213 ILRSGVDAILMDLGMSSMQVNNPERG 238 (452)
Q Consensus 213 l~~~~VDGILfDLGvSS~QLDd~~RG 238 (452)
....+|.||+.+ .-+.|++-+||
T Consensus 165 -~~~~~DvvLllk--~lh~LE~q~~~ 187 (253)
T 3frh_A 165 -PAEAGDLALIFK--LLPLLEREQAG 187 (253)
T ss_dssp -CCCBCSEEEEES--CHHHHHHHSTT
T ss_pred -CCCCcchHHHHH--HHHHhhhhchh
Confidence 124688886643 23566665555
No 281
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=82.18 E-value=0.95 Score=39.30 Aligned_cols=40 Identities=20% Similarity=0.381 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHhhcCCCeEEEEeecchh-----HHHHHHHHHhh
Q 012954 344 KTLESSLHACFDCLAPGGRLGVISFHSLE-----DRIVKQTFLSI 383 (452)
Q Consensus 344 ~~L~~~L~~a~~~L~pGGRLvVISFHSLE-----DRIVK~~F~~~ 383 (452)
+....+|..+..+|+|||+++++.|+.-+ -..+.+++..+
T Consensus 112 ~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l 156 (185)
T 3mti_A 112 HTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVLEYVIGL 156 (185)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHHHHHHHHHS
T ss_pred hhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHHHHHHhC
Confidence 44556788889999999999999997542 24455555443
No 282
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=82.13 E-value=0.48 Score=50.35 Aligned_cols=98 Identities=8% Similarity=0.040 Sum_probs=59.3
Q ss_pred ccc-chHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCC--------------CCEEEEEeCCHHHHHHHHHHHhhh
Q 012954 117 IPV-MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPE--------------LKLHIGVDVDPSALAKARAHLNSL 181 (452)
Q Consensus 117 ~PV-Ll~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~--------------~g~VigfDrD~~Ai~~Ak~rL~~~ 181 (452)
+|- +++-+++.+. +.+ +.++|-++|.||=..+.++.+.. ...++|+|+|+.++..|+.++.-.
T Consensus 229 TP~~Vv~lmv~ll~-p~~-~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~ 306 (544)
T 3khk_A 229 TPKSIVTLIVEMLE-PYK-GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIR 306 (544)
T ss_dssp CCHHHHHHHHHHHC-CCS-EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHh-cCC-CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHh
Confidence 554 3444455554 444 49999999999877666543210 236999999999999999877544
Q ss_pred ccCCCCCCceEEEEccCcchHHHHHhhhcccccccCccEEEEccCCCc
Q 012954 182 LHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSS 229 (452)
Q Consensus 182 ~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~l~~~~VDGILfDLGvSS 229 (452)
+.. .++.+++++.-. ... .....+|.||.|-=|+.
T Consensus 307 gi~-----~~i~i~~gDtL~-----~~~---~~~~~fD~Iv~NPPf~~ 341 (544)
T 3khk_A 307 GID-----FNFGKKNADSFL-----DDQ---HPDLRADFVMTNPPFNM 341 (544)
T ss_dssp TCC-----CBCCSSSCCTTT-----SCS---CTTCCEEEEEECCCSSC
T ss_pred CCC-----cccceeccchhc-----Ccc---cccccccEEEECCCcCC
Confidence 321 122224444211 000 01246899999876654
No 283
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=81.82 E-value=4.2 Score=41.28 Aligned_cols=50 Identities=14% Similarity=0.185 Sum_probs=43.0
Q ss_pred CCCCEEEEEccCCChhHHHHHH-hCCCCCEEEEEeCCHHHHHHHHHHHhhh
Q 012954 132 RTITSFVDCTLGAAGHSSAIIR-AHPELKLHIGVDVDPSALAKARAHLNSL 181 (452)
Q Consensus 132 ~~ggiyVDaTlG~GGHS~aIL~-~~p~~g~VigfDrD~~Ai~~Ak~rL~~~ 181 (452)
.+++++||+=.+-|-+|..+++ ..++.++||+|+-+|.+.+..++.++.|
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~ 275 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRY 275 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHT
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhh
Confidence 5889999999999999999884 4665578999999999999988877653
No 284
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=81.45 E-value=2.3 Score=42.00 Aligned_cols=89 Identities=16% Similarity=0.146 Sum_probs=62.0
Q ss_pred CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhccc
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDEN 212 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~ 212 (452)
+...++|.-+|.|==|..++...|. ..|+|+|+|+.+++.+++++..++. ++.+.+.++.. ..
T Consensus 132 ~p~~VLDLGCG~GpLAl~~~~~~p~-a~y~a~DId~~~le~a~~~l~~~g~-------~~~~~v~D~~~-----~~---- 194 (281)
T 3lcv_B 132 RPNTLRDLACGLNPLAAPWMGLPAE-TVYIASDIDARLVGFVDEALTRLNV-------PHRTNVADLLE-----DR---- 194 (281)
T ss_dssp CCSEEEETTCTTGGGCCTTTTCCTT-CEEEEEESBHHHHHHHHHHHHHTTC-------CEEEEECCTTT-----SC----
T ss_pred CCceeeeeccCccHHHHHHHhhCCC-CEEEEEeCCHHHHHHHHHHHHhcCC-------CceEEEeeecc-----cC----
Confidence 3569999999999666666655555 5799999999999999999987643 34444444421 11
Q ss_pred ccccCccEEEEccCCCccCCCCCCCCccc
Q 012954 213 ILRSGVDAILMDLGMSSMQVNNPERGFSV 241 (452)
Q Consensus 213 l~~~~VDGILfDLGvSS~QLDd~~RGFSf 241 (452)
....+|.+|+.+ .-+.||+..||=-|
T Consensus 195 -p~~~~DvaL~lk--ti~~Le~q~kg~g~ 220 (281)
T 3lcv_B 195 -LDEPADVTLLLK--TLPCLETQQRGSGW 220 (281)
T ss_dssp -CCSCCSEEEETT--CHHHHHHHSTTHHH
T ss_pred -CCCCcchHHHHH--HHHHhhhhhhHHHH
Confidence 235689888765 45677777666433
No 285
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=80.96 E-value=2.4 Score=41.45 Aligned_cols=96 Identities=8% Similarity=0.002 Sum_probs=63.8
Q ss_pred chHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCC----CCCEEEEEeCCH--------------H------------
Q 012954 120 MLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHP----ELKLHIGVDVDP--------------S------------ 169 (452)
Q Consensus 120 Ll~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p----~~g~VigfDrD~--------------~------------ 169 (452)
+|.+++..+......+.++.+=...|+-+..|.+.++ +.++|++||... .
T Consensus 93 ~L~~l~~~v~~~~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~ 172 (282)
T 2wk1_A 93 NIRQCVEDVIGNNVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAV 172 (282)
T ss_dssp HHHHHHHHHHHTTCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCC
T ss_pred HHHHHHHHHHhcCCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchh
Confidence 4566777664223457999999999976666544332 246799999531 1
Q ss_pred HHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhcccccccCccEEEEccC
Q 012954 170 ALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLG 226 (452)
Q Consensus 170 Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~l~~~~VDGILfDLG 226 (452)
.++.+++.++.++.. ..+++++.+.|.+ .|.+.. ...+|.|.+|..
T Consensus 173 ~~~~ar~n~~~~gl~----~~~I~li~Gda~e---tL~~~~----~~~~d~vfIDaD 218 (282)
T 2wk1_A 173 SEEEVRRNFRNYDLL----DEQVRFLPGWFKD---TLPTAP----IDTLAVLRMDGD 218 (282)
T ss_dssp CHHHHHHHHHHTTCC----STTEEEEESCHHH---HSTTCC----CCCEEEEEECCC
T ss_pred HHHHHHHHHHHcCCC----cCceEEEEeCHHH---HHhhCC----CCCEEEEEEcCC
Confidence 356778888877541 1479999999954 344321 246899999875
No 286
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=78.27 E-value=2.9 Score=40.07 Aligned_cols=88 Identities=18% Similarity=0.251 Sum_probs=54.1
Q ss_pred CCCEEEEEccCCChhHHHHHHh-------CCCC----CEEEEEeCCH---HHHH-----------HHHHHHhhhccC---
Q 012954 133 TITSFVDCTLGAAGHSSAIIRA-------HPEL----KLHIGVDVDP---SALA-----------KARAHLNSLLHG--- 184 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~-------~p~~----g~VigfDrD~---~Ai~-----------~Ak~rL~~~~~~--- 184 (452)
+...++|.-||.|-.+.++++. .|+. .++++++.+| +.+. .|++.++.+...
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 4568999999999888887775 4432 4799999998 3333 566666653110
Q ss_pred -----CCCCCceEEEEccCcchHHHHHhhhcccccccCccEEEEc
Q 012954 185 -----QAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMD 224 (452)
Q Consensus 185 -----~~~~~~r~~li~~nF~~i~~~L~~~~~~l~~~~VDGILfD 224 (452)
.+.+..+++++.++..+ .|...... ....+|.|++|
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~---~l~~~~~~-~~~~~D~iflD 180 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINE---LISQLDDS-LNQKVDAWFLD 180 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHH---HGGGSCGG-GTTCEEEEEEC
T ss_pred hhheeccCCceEEEEEECcHHH---HHhhcccc-cCCeEEEEEEC
Confidence 00112466677776655 34433100 01269999999
No 287
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=77.34 E-value=2.9 Score=40.36 Aligned_cols=59 Identities=19% Similarity=0.168 Sum_probs=40.0
Q ss_pred ccccchHHHHhhccCCCCCCEEEEEccCCChhH--HHH--HHhCCC---CCEEEEEeCCHHHHHHHHHHH
Q 012954 116 HIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHS--SAI--IRAHPE---LKLHIGVDVDPSALAKARAHL 178 (452)
Q Consensus 116 H~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS--~aI--L~~~p~---~g~VigfDrD~~Ai~~Ak~rL 178 (452)
|..++.+.++-. .+...+.|+-+|.|-.+ .+| .+.++. ...|+|+|+++.||+.|++..
T Consensus 92 ~f~~l~~~llp~----~~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~ 157 (274)
T 1af7_A 92 HFPILAEHARRR----HGEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGI 157 (274)
T ss_dssp HHHHHHHHHHHS----CSCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTE
T ss_pred HHHHHHHHccCC----CCCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcC
Confidence 555555554432 13457999999999753 443 334442 237999999999999999753
No 288
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=75.32 E-value=1.2 Score=43.87 Aligned_cols=106 Identities=11% Similarity=0.106 Sum_probs=70.7
Q ss_pred cCCchhhhhhcCCCCccccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhh
Q 012954 101 KDYDYESIIQQQQSSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNS 180 (452)
Q Consensus 101 ~~~~~~~~~~~~~~~H~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~ 180 (452)
.||..|..+.-......|-+++..++.+... .++.++|+=.|.|.=....|+ ...+++.+|.++++++.-+++++.
T Consensus 60 gE~~~GI~rl~~~~~~~p~~l~~yf~~l~~~-n~~~~LDlfaGSGaLgiEaLS---~~d~~vfvE~~~~a~~~L~~Nl~~ 135 (283)
T 2oo3_A 60 EEYKEGINPVWLDRENLPSLFLEYISVIKQI-NLNSTLSYYPGSPYFAINQLR---SQDRLYLCELHPTEYNFLLKLPHF 135 (283)
T ss_dssp CGGGGTHHHHHHTGGGSCGGGHHHHHHHHHH-SSSSSCCEEECHHHHHHHHSC---TTSEEEEECCSHHHHHHHTTSCCT
T ss_pred HHHHHHHHHHHhcccCCcHHHHHHHHHHHHh-cCCCceeEeCCcHHHHHHHcC---CCCeEEEEeCCHHHHHHHHHHhCc
Confidence 4566555544221124677777777777632 456689999999977777776 336799999999999887776643
Q ss_pred hccCCCCCCceEEEEccC-cchHHHHHhhhcccccccCccEEEEc
Q 012954 181 LLHGQAHPHLKTHTFAKN-FRHIKSVLGQIDENILRSGVDAILMD 224 (452)
Q Consensus 181 ~~~~~~~~~~r~~li~~n-F~~i~~~L~~~~~~l~~~~VDGILfD 224 (452)
..++++++.+ |+.+..++.. ...+|.|++|
T Consensus 136 --------~~~~~V~~~D~~~~L~~l~~~------~~~fdLVfiD 166 (283)
T 2oo3_A 136 --------NKKVYVNHTDGVSKLNALLPP------PEKRGLIFID 166 (283)
T ss_dssp --------TSCEEEECSCHHHHHHHHCSC------TTSCEEEEEC
T ss_pred --------CCcEEEEeCcHHHHHHHhcCC------CCCccEEEEC
Confidence 1378888877 6666544432 1247777765
No 289
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=74.81 E-value=2.3 Score=41.41 Aligned_cols=41 Identities=24% Similarity=0.326 Sum_probs=36.2
Q ss_pred CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHH
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak 175 (452)
+...++|.-.|.|..+..|++++|.. +++++|. +.+++.|+
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~ 228 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKL-KCIVFDR-PQVVENLS 228 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTC-EEEEEEC-HHHHTTCC
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCC-eEEEeeC-HHHHhhcc
Confidence 56899999999999999999999875 6999999 99887664
No 290
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=74.73 E-value=5.3 Score=40.90 Aligned_cols=45 Identities=22% Similarity=0.204 Sum_probs=35.1
Q ss_pred hHHHHhhcc-------CCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCH
Q 012954 121 LGEVLDVFS-------SSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDP 168 (452)
Q Consensus 121 l~Evl~~L~-------~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~ 168 (452)
|.|.++.|. ..++|..+||.-..-||=|..++++ +++|+|+|.-+
T Consensus 192 L~Ea~~~F~~~~~~~~~l~~G~~vlDLGAaPGGWT~~l~~r---g~~V~aVD~~~ 243 (375)
T 4auk_A 192 LEEAFHVFIPADEWDERLANGMWAVDLGACPGGWTYQLVKR---NMWVYSVDNGP 243 (375)
T ss_dssp HHHHHHHHSCGGGHHHHSCTTCEEEEETCTTCHHHHHHHHT---TCEEEEECSSC
T ss_pred HHHHHHhccchhhhhccCCCCCEEEEeCcCCCHHHHHHHHC---CCEEEEEEhhh
Confidence 666665542 1257999999999999999999986 36899999753
No 291
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=74.66 E-value=1.9 Score=41.02 Aligned_cols=36 Identities=11% Similarity=0.251 Sum_probs=27.6
Q ss_pred HHHHHHHHHhhcCCCeEEEEeecchh-----HHHHHHHHHh
Q 012954 347 ESSLHACFDCLAPGGRLGVISFHSLE-----DRIVKQTFLS 382 (452)
Q Consensus 347 ~~~L~~a~~~L~pGGRLvVISFHSLE-----DRIVK~~F~~ 382 (452)
+.+|..+..+|+|||+|++++|.... |.++.+++..
T Consensus 115 ~~~~~e~~rvLkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~ 155 (257)
T 4hg2_A 115 DRFWAELRRVARPGAVFAAVTYGLTRVDPEVDAVVDRLYHG 155 (257)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEECCCBCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCCEEEEEECCCCCCCHHHHHHHHHHHhc
Confidence 45788888999999999999986543 5666666554
No 292
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=73.24 E-value=2.4 Score=37.96 Aligned_cols=38 Identities=18% Similarity=0.173 Sum_probs=32.8
Q ss_pred CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHH
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAH 177 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~r 177 (452)
+++.++|.-.|.|..+..+++. +|+|.++.+++.++++
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~ 84 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKR 84 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHT
T ss_pred CCCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhc
Confidence 4789999999999888877653 8999999999999874
No 293
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=70.26 E-value=3.9 Score=35.74 Aligned_cols=27 Identities=19% Similarity=0.074 Sum_probs=22.6
Q ss_pred HHHHHHHHHHhhcCCCeEEEEeecchh
Q 012954 346 LESSLHACFDCLAPGGRLGVISFHSLE 372 (452)
Q Consensus 346 L~~~L~~a~~~L~pGGRLvVISFHSLE 372 (452)
++.+|..+..+|+|||++++-.|+.-+
T Consensus 133 ~~~~l~~~~~~LkpgG~lv~~~~~~~~ 159 (201)
T 2plw_A 133 TLSITHFMEQYINIGGTYIVKMYLGSQ 159 (201)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEECSTT
T ss_pred HHHHHHHHHHHccCCCEEEEEEeCCCC
Confidence 567888999999999999987887533
No 294
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=67.95 E-value=3.5 Score=39.10 Aligned_cols=38 Identities=26% Similarity=0.388 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeecchhHHHHHHHHHh
Q 012954 345 TLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLS 382 (452)
Q Consensus 345 ~L~~~L~~a~~~L~pGGRLvVISFHSLEDRIVK~~F~~ 382 (452)
....+|..+.++|+|||+|++.-+...+|......+..
T Consensus 156 ~~~~~l~~i~~~LkpGG~lii~e~~~~~~~~~~~~~~~ 193 (261)
T 4gek_A 156 ERQALLDKIYQGLNPGGALVLSEKFSFEDAKVGELLFN 193 (261)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEEBCCSSHHHHHHHHH
T ss_pred hHhHHHHHHHHHcCCCcEEEEEeccCCCCHHHHHHHHH
Confidence 34567899999999999999988888888776655443
No 295
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=67.89 E-value=17 Score=30.53 Aligned_cols=73 Identities=18% Similarity=0.065 Sum_probs=37.4
Q ss_pred CCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhcccccccCccEEE
Q 012954 143 GAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAIL 222 (452)
Q Consensus 143 G~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~l~~~~VDGIL 222 (452)
|.+||+...-.-....-+|+-+|-|+...+.-+..|+..+. ..+.....+....-+.+.+ ..+|.||
T Consensus 10 ~~~~~~~~~~~M~~~~~~ILivdd~~~~~~~l~~~L~~~~~------~~~v~~~~~~~~al~~l~~-------~~~dlvi 76 (164)
T 3t8y_A 10 HSSGLVPRGSHMTDRVIRVLVVDDSAFMRMVLKDIIDSQPD------MKVVGFAKDGLEAVEKAIE-------LKPDVIT 76 (164)
T ss_dssp --------------CCEEEEEECSCHHHHHHHHHHHHTSTT------EEEEEEESSHHHHHHHHHH-------HCCSEEE
T ss_pred ccCCcccCccccccCccEEEEEcCCHHHHHHHHHHHhcCCC------eEEEEecCCHHHHHHHhcc-------CCCCEEE
Confidence 45667766654433445699999999998888888876431 1121123444444444432 3699999
Q ss_pred EccCCC
Q 012954 223 MDLGMS 228 (452)
Q Consensus 223 fDLGvS 228 (452)
+|+.+.
T Consensus 77 lD~~l~ 82 (164)
T 3t8y_A 77 MDIEMP 82 (164)
T ss_dssp ECSSCS
T ss_pred EeCCCC
Confidence 998654
No 296
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=67.19 E-value=3 Score=36.44 Aligned_cols=28 Identities=25% Similarity=0.440 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHhhcCCCeEEEEeecc
Q 012954 343 LKTLESSLHACFDCLAPGGRLGVISFHS 370 (452)
Q Consensus 343 L~~L~~~L~~a~~~L~pGGRLvVISFHS 370 (452)
...+..+|..+..+|+|||+++++++..
T Consensus 135 ~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 135 VHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred hHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 5567889999999999999999999976
No 297
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=66.35 E-value=3.9 Score=36.65 Aligned_cols=30 Identities=23% Similarity=0.303 Sum_probs=24.9
Q ss_pred hHHHHHHHHHHHHHhhcCCCeEEEEeecch
Q 012954 342 ELKTLESSLHACFDCLAPGGRLGVISFHSL 371 (452)
Q Consensus 342 EL~~L~~~L~~a~~~L~pGGRLvVISFHSL 371 (452)
+++.+..+|..+.++|+|||++++++-|..
T Consensus 154 ~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 183 (230)
T 3evz_A 154 GEEFSVKLLEEAFDHLNPGGKVALYLPDKE 183 (230)
T ss_dssp SCHHHHHHHHHHGGGEEEEEEEEEEEESCH
T ss_pred chHHHHHHHHHHHHHhCCCeEEEEEecccH
Confidence 445568899999999999999999887754
No 298
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=66.05 E-value=2.7 Score=36.64 Aligned_cols=41 Identities=17% Similarity=0.018 Sum_probs=30.3
Q ss_pred hhHHHHHHHHHHHHHhhcCCCeEEEEeecchhHHHHHHHHH
Q 012954 341 DELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFL 381 (452)
Q Consensus 341 ~EL~~L~~~L~~a~~~L~pGGRLvVISFHSLEDRIVK~~F~ 381 (452)
+.++.+..+|..+..+|+|||+++++.+..-...-+.+.+.
T Consensus 138 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~ 178 (215)
T 4dzr_A 138 DGLQFYRRMAALPPYVLARGRAGVFLEVGHNQADEVARLFA 178 (215)
T ss_dssp CTTHHHHHHHTCCGGGBCSSSEEEEEECTTSCHHHHHHHTG
T ss_pred cHHHHHHHHHHHHHHHhcCCCeEEEEEECCccHHHHHHHHH
Confidence 34566788999999999999997777665544555566665
No 299
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=64.32 E-value=7.9 Score=34.91 Aligned_cols=35 Identities=11% Similarity=-0.090 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeecchhHHHHHHH
Q 012954 345 TLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQT 379 (452)
Q Consensus 345 ~L~~~L~~a~~~L~pGGRLvVISFHSLEDRIVK~~ 379 (452)
.+..+|..+..+|+|||+|+|+.+..-....+...
T Consensus 141 ~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~ 175 (245)
T 3ggd_A 141 KRELLGQSLRILLGKQGAMYLIELGTGCIDFFNSL 175 (245)
T ss_dssp GHHHHHHHHHHHHTTTCEEEEEEECTTHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCEEEEEeCCccccHHHHHH
Confidence 34678888899999999999999987665544443
No 300
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=64.31 E-value=5.1 Score=39.54 Aligned_cols=46 Identities=15% Similarity=0.010 Sum_probs=36.4
Q ss_pred hHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCH
Q 012954 121 LGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDP 168 (452)
Q Consensus 121 l~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~ 168 (452)
|.|+.+-.. .++++.+||+.+|-||+|+..++..+- ..|+|+|+-.
T Consensus 79 L~ei~eK~~-Lk~~~~VLDLGaAPGGWsQvAa~~~gv-~sV~GvdvG~ 124 (282)
T 3gcz_A 79 LRWMEERGY-VKPTGIVVDLGCGRGGWSYYAASLKNV-KKVMAFTLGV 124 (282)
T ss_dssp HHHHHHTTS-CCCCEEEEEETCTTCHHHHHHHTSTTE-EEEEEECCCC
T ss_pred HHHHHHhcC-CCCCCEEEEeCCCCCHHHHHHHHhcCC-CeeeeEEecc
Confidence 666666663 568899999999999999988876654 3588998853
No 301
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=63.86 E-value=2.1 Score=36.97 Aligned_cols=28 Identities=18% Similarity=0.303 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeecchh
Q 012954 345 TLESSLHACFDCLAPGGRLGVISFHSLE 372 (452)
Q Consensus 345 ~L~~~L~~a~~~L~pGGRLvVISFHSLE 372 (452)
.+..+|..+.++|+|||+++++++..-+
T Consensus 114 ~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 141 (199)
T 2xvm_A 114 TIPGLIANMQRCTKPGGYNLIVAAMDTA 141 (199)
T ss_dssp GHHHHHHHHHHTEEEEEEEEEEEEBCCS
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEeeccC
Confidence 4577888899999999999999987643
No 302
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=63.08 E-value=4.6 Score=36.74 Aligned_cols=37 Identities=14% Similarity=0.242 Sum_probs=30.4
Q ss_pred HHHHHHHHHHhhcCCCeEEEEeecchhHHHHHHHHHh
Q 012954 346 LESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLS 382 (452)
Q Consensus 346 L~~~L~~a~~~L~pGGRLvVISFHSLEDRIVK~~F~~ 382 (452)
+..+|..+..+|+|||+++++.+..-++.....++..
T Consensus 103 ~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~ 139 (239)
T 1xxl_A 103 VRKAVREVARVLKQDGRFLLVDHYAPEDPVLDEFVNH 139 (239)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCcEEEEEEcCCCCChhHHHHHHH
Confidence 5678899999999999999999888777766666554
No 303
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=61.84 E-value=5.8 Score=34.64 Aligned_cols=29 Identities=17% Similarity=0.232 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHhhcCCCeEEEEeecch
Q 012954 343 LKTLESSLHACFDCLAPGGRLGVISFHSL 371 (452)
Q Consensus 343 L~~L~~~L~~a~~~L~pGGRLvVISFHSL 371 (452)
.+.+..+|..+..+|+|||++++.+++.-
T Consensus 107 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 135 (202)
T 2kw5_A 107 SSLRQQLYPKVYQGLKPGGVFILEGFAPE 135 (202)
T ss_dssp HHHHHHHHHHHHTTCCSSEEEEEEEECTT
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEeccc
Confidence 34678889999999999999999998754
No 304
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=59.13 E-value=4.2 Score=39.78 Aligned_cols=36 Identities=14% Similarity=-0.084 Sum_probs=28.3
Q ss_pred HHHHHHHHHhhcCCCeEEEEeecchhHHHHHHHHHh
Q 012954 347 ESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLS 382 (452)
Q Consensus 347 ~~~L~~a~~~L~pGGRLvVISFHSLEDRIVK~~F~~ 382 (452)
+.+|..+.++|+|||++++..|+.-+..-+.+.+++
T Consensus 151 ~~~l~~a~r~LkpGG~~v~~~~~~~~~~~l~~~l~~ 186 (290)
T 2xyq_A 151 TYLCGFIKQKLALGGSIAVKITEHSWNADLYKLMGH 186 (290)
T ss_dssp HHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCcEEEEEEeccCCHHHHHHHHHH
Confidence 467778889999999999988887665566666654
No 305
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=58.64 E-value=6.6 Score=38.25 Aligned_cols=50 Identities=24% Similarity=0.249 Sum_probs=39.0
Q ss_pred HHHhhc--cCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHH
Q 012954 123 EVLDVF--SSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKAR 175 (452)
Q Consensus 123 Evl~~L--~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak 175 (452)
++++.+ . ..+...++|.-.|.|..+..|++++|.. +++++|. +.+++.|+
T Consensus 182 ~~~~~~~~~-~~~~~~vlDvG~G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~ 233 (358)
T 1zg3_A 182 LVLQENKRV-FEGLESLVDVGGGTGGVTKLIHEIFPHL-KCTVFDQ-PQVVGNLT 233 (358)
T ss_dssp HHHHHTHHH-HHTCSEEEEETCTTSHHHHHHHHHCTTS-EEEEEEC-HHHHSSCC
T ss_pred HHHHhcchh-ccCCCEEEEECCCcCHHHHHHHHHCCCC-eEEEecc-HHHHhhcc
Confidence 455544 2 1256799999999999999999999875 6899999 78876554
No 306
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=58.03 E-value=8 Score=37.49 Aligned_cols=36 Identities=19% Similarity=0.320 Sum_probs=26.8
Q ss_pred HHHHHHHHHhhcCCCeEEEEe--ecchhHH-HHHHHHHh
Q 012954 347 ESSLHACFDCLAPGGRLGVIS--FHSLEDR-IVKQTFLS 382 (452)
Q Consensus 347 ~~~L~~a~~~L~pGGRLvVIS--FHSLEDR-IVK~~F~~ 382 (452)
..+|..+..+|+|||+|++.| +|.-|.. +|..++++
T Consensus 226 ~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~ 264 (315)
T 1ixk_A 226 MRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQWALDN 264 (315)
T ss_dssp HHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHHHHHHhc
Confidence 678889999999999998753 5656654 45666554
No 307
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=57.68 E-value=13 Score=33.33 Aligned_cols=36 Identities=17% Similarity=0.226 Sum_probs=24.3
Q ss_pred HHHHHHHHHHhhcCCCeEEEEeecchhHHHHHHHHHh
Q 012954 346 LESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLS 382 (452)
Q Consensus 346 L~~~L~~a~~~L~pGGRLvVISFHSLEDRIVK~~F~~ 382 (452)
.+ +|..+.++|+|||++++.++.--.-..+.+.+++
T Consensus 134 ~~-~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~ 169 (204)
T 3njr_A 134 QA-LYDRLWEWLAPGTRIVANAVTLESETLLTQLHAR 169 (204)
T ss_dssp HH-HHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHHH
T ss_pred HH-HHHHHHHhcCCCcEEEEEecCcccHHHHHHHHHh
Confidence 44 7888889999999998776653333334445554
No 308
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=57.44 E-value=6.6 Score=35.11 Aligned_cols=26 Identities=8% Similarity=-0.076 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeecc
Q 012954 345 TLESSLHACFDCLAPGGRLGVISFHS 370 (452)
Q Consensus 345 ~L~~~L~~a~~~L~pGGRLvVISFHS 370 (452)
....+|..+..+|+|||++++++++.
T Consensus 118 ~~~~~l~~~~r~LkpgG~~~l~~~~~ 143 (203)
T 1pjz_A 118 MRERYVQHLEALMPQACSGLLITLEY 143 (203)
T ss_dssp HHHHHHHHHHHHSCSEEEEEEEEESS
T ss_pred HHHHHHHHHHHHcCCCcEEEEEEEec
Confidence 45678889999999999977776553
No 309
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=57.34 E-value=36 Score=31.19 Aligned_cols=80 Identities=16% Similarity=0.177 Sum_probs=53.5
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHH---HHhhhcccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKS---VLGQIDENILR 215 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~---~L~~~~~~l~~ 215 (452)
.|=|.||=-.++.+.+ ....+|+.+|++++.++.+.+.++.++ .++.++..+.++.++ ++++... ..
T Consensus 11 VTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~Dv~~~~~v~~~~~~~~~--~~ 81 (257)
T 3imf_A 11 ITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFP-------GQILTVQMDVRNTDDIQKMIEQIDE--KF 81 (257)
T ss_dssp ETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCST-------TCEEEEECCTTCHHHHHHHHHHHHH--HH
T ss_pred EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CcEEEEEccCCCHHHHHHHHHHHHH--Hc
Confidence 4777777666666653 233579999999999988877776543 267777777765443 3433211 11
Q ss_pred cCccEEEEccCCC
Q 012954 216 SGVDAILMDLGMS 228 (452)
Q Consensus 216 ~~VDGILfDLGvS 228 (452)
..+|.++-+=|+.
T Consensus 82 g~id~lv~nAg~~ 94 (257)
T 3imf_A 82 GRIDILINNAAGN 94 (257)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 3699999998864
No 310
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=56.49 E-value=10 Score=37.22 Aligned_cols=45 Identities=11% Similarity=-0.034 Sum_probs=34.5
Q ss_pred hHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCC
Q 012954 121 LGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVD 167 (452)
Q Consensus 121 l~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD 167 (452)
|.|+.+-.. .++++.+||+-+|.||+|...+++.+- +.+.|+|+-
T Consensus 63 L~ei~ek~~-l~~~~~VLDLGaAPGGWSQvAa~~~~~-~~v~g~dVG 107 (277)
T 3evf_A 63 LRWFHERGY-VKLEGRVIDLGCGRGGWCYYAAAQKEV-SGVKGFTLG 107 (277)
T ss_dssp HHHHHHTTS-SCCCEEEEEETCTTCHHHHHHHTSTTE-EEEEEECCC
T ss_pred HHHHHHhCC-CCCCCEEEEecCCCCHHHHHHHHhcCC-CcceeEEEe
Confidence 666666643 568889999999999999988876543 357787775
No 311
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=56.17 E-value=51 Score=30.08 Aligned_cols=77 Identities=14% Similarity=0.135 Sum_probs=48.6
Q ss_pred CCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHH---HhhhcccccccCcc
Q 012954 143 GAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSV---LGQIDENILRSGVD 219 (452)
Q Consensus 143 G~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~---L~~~~~~l~~~~VD 219 (452)
|-|-+...-|.+. ..+|+.+|++++.++.+.+.+..... .++.++..+.++.+++ +++... ....+|
T Consensus 34 GIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~------~~~~~~~~Dl~~~~~v~~~~~~~~~--~~g~id 103 (266)
T 3o38_A 34 GIGSTTARRALLE--GADVVISDYHERRLGETRDQLADLGL------GRVEAVVCDVTSTEAVDALITQTVE--KAGRLD 103 (266)
T ss_dssp SHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTCS------SCEEEEECCTTCHHHHHHHHHHHHH--HHSCCC
T ss_pred chHHHHHHHHHHC--CCEEEEecCCHHHHHHHHHHHHhcCC------CceEEEEeCCCCHHHHHHHHHHHHH--HhCCCc
Confidence 3444443333333 34699999999998888777755432 3688888777765443 333211 013699
Q ss_pred EEEEccCCCc
Q 012954 220 AILMDLGMSS 229 (452)
Q Consensus 220 GILfDLGvSS 229 (452)
.++.+=|++.
T Consensus 104 ~li~~Ag~~~ 113 (266)
T 3o38_A 104 VLVNNAGLGG 113 (266)
T ss_dssp EEEECCCCCC
T ss_pred EEEECCCcCC
Confidence 9999999754
No 312
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=55.84 E-value=11 Score=36.76 Aligned_cols=64 Identities=11% Similarity=0.168 Sum_probs=44.2
Q ss_pred CCCCCEEEEEccCC------ChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEE-EccCcchHH
Q 012954 131 SRTITSFVDCTLGA------AGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHT-FAKNFRHIK 203 (452)
Q Consensus 131 ~~~ggiyVDaTlG~------GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~l-i~~nF~~i~ 203 (452)
.+++..++|.-.|. |+ ..+++..+..++|+|+|+++. + . ++++ ++++...+.
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~--------v----~-------~v~~~i~gD~~~~~ 119 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF--------V----S-------DADSTLIGDCATVH 119 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC--------B----C-------SSSEEEESCGGGCC
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC--------C----C-------CCEEEEECccccCC
Confidence 45788999999955 65 444555776678999999987 1 1 3455 777765421
Q ss_pred HHHhhhcccccccCccEEEEcc
Q 012954 204 SVLGQIDENILRSGVDAILMDL 225 (452)
Q Consensus 204 ~~L~~~~~~l~~~~VDGILfDL 225 (452)
. ...+|.|+.|.
T Consensus 120 -----~-----~~~fD~Vvsn~ 131 (290)
T 2xyq_A 120 -----T-----ANKWDLIISDM 131 (290)
T ss_dssp -----C-----SSCEEEEEECC
T ss_pred -----c-----cCcccEEEEcC
Confidence 0 13699999985
No 313
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=55.41 E-value=7 Score=35.69 Aligned_cols=36 Identities=17% Similarity=0.242 Sum_probs=27.3
Q ss_pred HHHHHHHHHHhhcCCCeEEEEeecchhHHHHHHHHH
Q 012954 346 LESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFL 381 (452)
Q Consensus 346 L~~~L~~a~~~L~pGGRLvVISFHSLEDRIVK~~F~ 381 (452)
...+|..+..+|+|||+|+++.+..-++.....++.
T Consensus 119 ~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~ 154 (260)
T 1vl5_A 119 PASFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYN 154 (260)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEEEBCSSHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCEEEEEEcCCCCCHHHHHHHH
Confidence 457888899999999999998877655555544443
No 314
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=55.32 E-value=8.8 Score=38.78 Aligned_cols=37 Identities=22% Similarity=0.217 Sum_probs=28.2
Q ss_pred HHHHHHHHHhhcCCCeEEEEe--ecchhH-HHHHHHHHhh
Q 012954 347 ESSLHACFDCLAPGGRLGVIS--FHSLED-RIVKQTFLSI 383 (452)
Q Consensus 347 ~~~L~~a~~~L~pGGRLvVIS--FHSLED-RIVK~~F~~~ 383 (452)
...|..+..+|+|||+|++.| +|.-|. ..|..++.+.
T Consensus 354 ~~~L~~a~~~LkpGG~lvystcs~~~~ene~~v~~~l~~~ 393 (429)
T 1sqg_A 354 SEILDAIWPHLKTGGTLVYATCSVLPEENSLQIKAFLQRT 393 (429)
T ss_dssp HHHHHHHGGGEEEEEEEEEEESCCCGGGTHHHHHHHHHHC
T ss_pred HHHHHHHHHhcCCCCEEEEEECCCChhhHHHHHHHHHHhC
Confidence 577889999999999999876 555564 4667776653
No 315
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=55.09 E-value=11 Score=37.26 Aligned_cols=36 Identities=14% Similarity=0.165 Sum_probs=27.5
Q ss_pred HHHHHHHHHHhhcCCCeEEEEeecchhH-----HHHHHHHH
Q 012954 346 LESSLHACFDCLAPGGRLGVISFHSLED-----RIVKQTFL 381 (452)
Q Consensus 346 L~~~L~~a~~~L~pGGRLvVISFHSLED-----RIVK~~F~ 381 (452)
+..+|..+.++|+|||+++++++++.+. ..|++++.
T Consensus 256 ~~~~l~~~~~~LkpgG~~~~~~~~~~~~~~~~~~~~~~~l~ 296 (373)
T 2qm3_A 256 IRAFVGRGIATLKGPRCAGYFGITRRESSLDKWREIQKLLL 296 (373)
T ss_dssp HHHHHHHHHHTBCSTTCEEEEEECTTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCeEEEEEEecCcCCHHHHHHHHHHHH
Confidence 4888999999999999998888887221 34566554
No 316
>2edu_A Kinesin-like protein KIF22; kinesin-like DNA binding domain, helix turn helix motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.60.2.7
Probab=55.03 E-value=2 Score=35.18 Aligned_cols=58 Identities=16% Similarity=0.154 Sum_probs=42.0
Q ss_pred CCCCCcccCCCCCCCC----HHHHHhcCChHHHHHHHHHhCCCcchHHHHHHHHHHHhh-CCCCcHHHH
Q 012954 243 GDGPLDMRMDPQASLK----AEDILNSWPDAEVGRVLREYGEESNWHLLQNKIVQARLR-GGLHSTGEL 306 (452)
Q Consensus 243 ~dgPLDMRMD~~~~~t----AadiLN~~se~eL~~Ifr~YGEE~~A~rIA~aIv~~R~~-~~i~TT~eL 306 (452)
.|..++|+|||..... .---||+.+.++|..|- | -..+.|++|++.|+. +++.+..||
T Consensus 10 ~~~~~~l~~~pe~~~~~~~~~~i~iN~a~~~~L~~ip---G---IG~~~A~~Il~~r~~~g~f~s~edL 72 (98)
T 2edu_A 10 AEDCWELQISPELLAHGRQKILDLLNEGSARDLRSLQ---R---IGPKKAQLIVGWRELHGPFSQVEDL 72 (98)
T ss_dssp CCSCSTTTSCHHHHHHHHHHHHHHHHHSCHHHHHHST---T---CCHHHHHHHHHHHHHHCCCSSGGGG
T ss_pred CCCcceeccCHHHHHHHHhccCeehhhCCHHHHHHCC---C---CCHHHHHHHHHHHHhcCCcCCHHHH
Confidence 3667999999863221 12248999999987752 2 346789999999985 799888886
No 317
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=54.33 E-value=7.4 Score=36.69 Aligned_cols=37 Identities=16% Similarity=0.215 Sum_probs=27.3
Q ss_pred HHHHHHHHHHhhcCCCeEEEEe--ecchhH-HHHHHHHHh
Q 012954 346 LESSLHACFDCLAPGGRLGVIS--FHSLED-RIVKQTFLS 382 (452)
Q Consensus 346 L~~~L~~a~~~L~pGGRLvVIS--FHSLED-RIVK~~F~~ 382 (452)
....|..+..+|+|||+|++.| +|.-|. ..|+.+..+
T Consensus 190 ~~~~l~~~~~~LkpgG~lv~stcs~~~~ene~~v~~~l~~ 229 (274)
T 3ajd_A 190 QKELIDIGIDLLKKDGELVYSTCSMEVEENEEVIKYILQK 229 (274)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEESCCCTTSSHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCEEEEEECCCChHHhHHHHHHHHHh
Confidence 4678889999999999998854 565574 456665544
No 318
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=54.26 E-value=6.5 Score=40.16 Aligned_cols=41 Identities=20% Similarity=0.261 Sum_probs=29.8
Q ss_pred HHHH-HHHHHHHHHhhcCCCeEEEEe--ecchhHH-HHHHHHHhh
Q 012954 343 LKTL-ESSLHACFDCLAPGGRLGVIS--FHSLEDR-IVKQTFLSI 383 (452)
Q Consensus 343 L~~L-~~~L~~a~~~L~pGGRLvVIS--FHSLEDR-IVK~~F~~~ 383 (452)
+..+ ...|..+..+|+|||+|++.| +|.-|.. .|..++.++
T Consensus 364 l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~ene~~v~~~l~~~ 408 (450)
T 2yxl_A 364 MSQLQRELLESAARLVKPGGRLLYTTCSIFKEENEKNIRWFLNVH 408 (450)
T ss_dssp HHHHHHHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEeCCCChhhHHHHHHHHHHhC
Confidence 3444 577999999999999999865 4666644 667766653
No 319
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=53.92 E-value=4.6 Score=37.85 Aligned_cols=29 Identities=31% Similarity=0.523 Sum_probs=24.7
Q ss_pred HHhhHHHHHHHHHHHHHhhcCCCeEEEEe
Q 012954 339 VNDELKTLESSLHACFDCLAPGGRLGVIS 367 (452)
Q Consensus 339 VN~EL~~L~~~L~~a~~~L~pGGRLvVIS 367 (452)
+..++..+..+|..+..+|+|||+|++..
T Consensus 187 ~~~~~~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 187 VSPDLASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp HCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 34556788999999999999999999974
No 320
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=53.84 E-value=67 Score=28.70 Aligned_cols=81 Identities=12% Similarity=0.042 Sum_probs=51.7
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHH---HHhhhcccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKS---VLGQIDENILR 215 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~---~L~~~~~~l~~ 215 (452)
.|=|.||=-.++.+.+ .....|+++|++++.++...+.+...+ .++.++..+..+.+. .+.+... ..
T Consensus 16 VtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~~~~--~~ 86 (255)
T 1fmc_A 16 ITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG-------GQAFACRCDITSEQELSALADFAIS--KL 86 (255)
T ss_dssp ETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTT-------CCEEEEECCTTCHHHHHHHHHHHHH--HH
T ss_pred EECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhC-------CceEEEEcCCCCHHHHHHHHHHHHH--hc
Confidence 4777777777776663 334579999999988776666665432 256677777665443 3332210 01
Q ss_pred cCccEEEEccCCCc
Q 012954 216 SGVDAILMDLGMSS 229 (452)
Q Consensus 216 ~~VDGILfDLGvSS 229 (452)
..+|+++..-|+..
T Consensus 87 ~~~d~vi~~Ag~~~ 100 (255)
T 1fmc_A 87 GKVDILVNNAGGGG 100 (255)
T ss_dssp SSCCEEEECCCCCC
T ss_pred CCCCEEEECCCCCC
Confidence 36999999888754
No 321
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=53.80 E-value=5.8 Score=36.91 Aligned_cols=26 Identities=27% Similarity=0.350 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHhhcCCCeEEEEee
Q 012954 343 LKTLESSLHACFDCLAPGGRLGVISF 368 (452)
Q Consensus 343 L~~L~~~L~~a~~~L~pGGRLvVISF 368 (452)
+..+..+|..+..+|||||+|++...
T Consensus 173 ~~~~~~~l~~i~r~LKPGG~li~~~~ 198 (263)
T 2a14_A 173 LDAYRAALCNLASLLKPGGHLVTTVT 198 (263)
T ss_dssp HHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 56778899999999999999999863
No 322
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=53.78 E-value=8.2 Score=36.31 Aligned_cols=31 Identities=6% Similarity=0.206 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHhhcCCCeEEEEeecchhHH
Q 012954 344 KTLESSLHACFDCLAPGGRLGVISFHSLEDR 374 (452)
Q Consensus 344 ~~L~~~L~~a~~~L~pGGRLvVISFHSLEDR 374 (452)
+.+..+|..+..+|+|||++++.++..-+..
T Consensus 160 ~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~ 190 (302)
T 3hem_A 160 ERYDTFFKKFYNLTPDDGRMLLHTITIPDKE 190 (302)
T ss_dssp THHHHHHHHHHHSSCTTCEEEEEEEECCCHH
T ss_pred hHHHHHHHHHHHhcCCCcEEEEEEEeccCcc
Confidence 4567889999999999999999988765443
No 323
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=53.59 E-value=7 Score=34.52 Aligned_cols=27 Identities=22% Similarity=0.376 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeecch
Q 012954 345 TLESSLHACFDCLAPGGRLGVISFHSL 371 (452)
Q Consensus 345 ~L~~~L~~a~~~L~pGGRLvVISFHSL 371 (452)
....+|..+.++|+|||++++++++.-
T Consensus 119 ~~~~~l~~~~~~L~pgG~l~~~~~~~~ 145 (235)
T 3sm3_A 119 ERSRIIKEVFRVLKPGAYLYLVEFGQN 145 (235)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEEBCC
T ss_pred HHHHHHHHHHHHcCCCeEEEEEECCcc
Confidence 344788888999999999999998653
No 324
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=53.45 E-value=6.1 Score=34.56 Aligned_cols=27 Identities=19% Similarity=0.352 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeecch
Q 012954 345 TLESSLHACFDCLAPGGRLGVISFHSL 371 (452)
Q Consensus 345 ~L~~~L~~a~~~L~pGGRLvVISFHSL 371 (452)
.+..+|..+.++|+|||++++.+++.-
T Consensus 124 ~~~~~l~~~~~~L~pgG~l~~~~~~~~ 150 (218)
T 3ou2_A 124 RFEAFWESVRSAVAPGGVVEFVDVTDH 150 (218)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHcCCCeEEEEEeCCCC
Confidence 467789999999999999999998773
No 325
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=52.66 E-value=5.5 Score=37.52 Aligned_cols=24 Identities=8% Similarity=-0.076 Sum_probs=21.0
Q ss_pred HHHHHHHHHHhhcCCCeEEEEeec
Q 012954 346 LESSLHACFDCLAPGGRLGVISFH 369 (452)
Q Consensus 346 L~~~L~~a~~~L~pGGRLvVISFH 369 (452)
....+..+..+|+|||+++++|+.
T Consensus 170 ~~~~l~~~~~~LkpGG~l~l~~~~ 193 (252)
T 2gb4_A 170 HDRYADIILSLLRKEFQYLVAVLS 193 (252)
T ss_dssp HHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCeEEEEEEEe
Confidence 467788899999999999998876
No 326
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=52.37 E-value=6.8 Score=34.56 Aligned_cols=28 Identities=25% Similarity=0.424 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHhhcCCCeEEEEeecc
Q 012954 343 LKTLESSLHACFDCLAPGGRLGVISFHS 370 (452)
Q Consensus 343 L~~L~~~L~~a~~~L~pGGRLvVISFHS 370 (452)
.+.+..+|..+..+|+|||++++.+++.
T Consensus 130 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 157 (216)
T 3ofk_A 130 MTQMRTAIDNMVKMLAPGGHLVFGSARD 157 (216)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 3566788999999999999999988654
No 327
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=51.72 E-value=10 Score=33.48 Aligned_cols=43 Identities=12% Similarity=0.066 Sum_probs=31.5
Q ss_pred hHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHH
Q 012954 121 LGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPS 169 (452)
Q Consensus 121 l~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~ 169 (452)
+.++++.|....++..++|.-.|.|..+..+ . ..++|+|.++.
T Consensus 55 ~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l----~--~~v~~~D~s~~ 97 (215)
T 2zfu_A 55 VDRIARDLRQRPASLVVADFGCGDCRLASSI----R--NPVHCFDLASL 97 (215)
T ss_dssp HHHHHHHHHTSCTTSCEEEETCTTCHHHHHC----C--SCEEEEESSCS
T ss_pred HHHHHHHHhccCCCCeEEEECCcCCHHHHHh----h--ccEEEEeCCCC
Confidence 3456666653346789999999999777665 2 45999999976
No 328
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=51.72 E-value=57 Score=30.36 Aligned_cols=81 Identities=12% Similarity=0.041 Sum_probs=52.2
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHH---HHhhhcccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKS---VLGQIDENILR 215 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~---~L~~~~~~l~~ 215 (452)
.|=|.||=-.++.+.+ ..+.+|+.+|++++.++.+.+.+...+ .++.++..+.++.++ .+.+... ..
T Consensus 29 VTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~Dv~d~~~v~~~~~~~~~--~~ 99 (279)
T 3sju_A 29 VTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAG-------HDVDGSSCDVTSTDEVHAAVAAAVE--RF 99 (279)
T ss_dssp EESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT-------CCEEEEECCTTCHHHHHHHHHHHHH--HH
T ss_pred EeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CcEEEEECCCCCHHHHHHHHHHHHH--Hc
Confidence 4666676555555542 233579999999999888777776543 257777777765443 3333211 12
Q ss_pred cCccEEEEccCCCc
Q 012954 216 SGVDAILMDLGMSS 229 (452)
Q Consensus 216 ~~VDGILfDLGvSS 229 (452)
..+|.++-+=|+..
T Consensus 100 g~id~lv~nAg~~~ 113 (279)
T 3sju_A 100 GPIGILVNSAGRNG 113 (279)
T ss_dssp CSCCEEEECCCCCC
T ss_pred CCCcEEEECCCCCC
Confidence 36999999999753
No 329
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=51.50 E-value=29 Score=31.92 Aligned_cols=80 Identities=13% Similarity=0.069 Sum_probs=53.3
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHH---Hhhhcccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSV---LGQIDENILR 215 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~---L~~~~~~l~~ 215 (452)
.|=|.||=-.++.+.+ ..+.+|+.+|++++.++.+.+.+...+ .++.++..+.++.+++ +.+... .
T Consensus 12 VTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~Dv~~~~~v~~~~~~~~~---~ 81 (252)
T 3h7a_A 12 VIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAG-------GRIVARSLDARNEDEVTAFLNAADA---H 81 (252)
T ss_dssp EECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT-------CEEEEEECCTTCHHHHHHHHHHHHH---H
T ss_pred EECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CeEEEEECcCCCHHHHHHHHHHHHh---h
Confidence 4666776556665553 233479999999998888877776543 2677888777665443 333211 1
Q ss_pred cCccEEEEccCCCc
Q 012954 216 SGVDAILMDLGMSS 229 (452)
Q Consensus 216 ~~VDGILfDLGvSS 229 (452)
..+|.++-+=|+..
T Consensus 82 g~id~lv~nAg~~~ 95 (252)
T 3h7a_A 82 APLEVTIFNVGANV 95 (252)
T ss_dssp SCEEEEEECCCCCC
T ss_pred CCceEEEECCCcCC
Confidence 47999999999753
No 330
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=51.49 E-value=61 Score=30.22 Aligned_cols=80 Identities=9% Similarity=-0.009 Sum_probs=53.1
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHH---HHhhhcccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKS---VLGQIDENILR 215 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~---~L~~~~~~l~~ 215 (452)
.|=|.||=-.+|.+.+ ..+.+|+.+|++++.++.+.+.++..+ .++.++..+..+.++ ++.+... ..
T Consensus 9 VTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~Dv~d~~~v~~~~~~~~~--~~ 79 (264)
T 3tfo_A 9 ITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAG-------GTALAQVLDVTDRHSVAAFAQAAVD--TW 79 (264)
T ss_dssp ESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT-------CEEEEEECCTTCHHHHHHHHHHHHH--HH
T ss_pred EeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-------CcEEEEEcCCCCHHHHHHHHHHHHH--Hc
Confidence 4777777666666663 234579999999999988877776643 267777766665443 3333211 02
Q ss_pred cCccEEEEccCCC
Q 012954 216 SGVDAILMDLGMS 228 (452)
Q Consensus 216 ~~VDGILfDLGvS 228 (452)
..+|.++-+=|+.
T Consensus 80 g~iD~lVnnAG~~ 92 (264)
T 3tfo_A 80 GRIDVLVNNAGVM 92 (264)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 3699999998874
No 331
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=51.43 E-value=63 Score=29.69 Aligned_cols=82 Identities=16% Similarity=0.114 Sum_probs=53.8
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHH---HHhhhcccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKS---VLGQIDENILR 215 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~---~L~~~~~~l~~ 215 (452)
.|=|.||=-.++.+.+ ....+|+.+|++++.++.+.+.++..+. .++.++..+.++.++ ++.+... ..
T Consensus 15 VTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~------~~~~~~~~Dv~~~~~v~~~~~~~~~--~~ 86 (262)
T 3pk0_A 15 VTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGS------GKVIGVQTDVSDRAQCDALAGRAVE--EF 86 (262)
T ss_dssp ETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSS------SCEEEEECCTTSHHHHHHHHHHHHH--HH
T ss_pred EECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCC------CcEEEEEcCCCCHHHHHHHHHHHHH--Hh
Confidence 5777777666666653 2334799999999999888777765431 267777777665443 3333211 12
Q ss_pred cCccEEEEccCCCc
Q 012954 216 SGVDAILMDLGMSS 229 (452)
Q Consensus 216 ~~VDGILfDLGvSS 229 (452)
..+|.++-+=|+..
T Consensus 87 g~id~lvnnAg~~~ 100 (262)
T 3pk0_A 87 GGIDVVCANAGVFP 100 (262)
T ss_dssp SCCSEEEECCCCCC
T ss_pred CCCCEEEECCCCCC
Confidence 36999999999753
No 332
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=51.10 E-value=12 Score=37.26 Aligned_cols=46 Identities=13% Similarity=0.021 Sum_probs=35.1
Q ss_pred hHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCH
Q 012954 121 LGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDP 168 (452)
Q Consensus 121 l~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~ 168 (452)
|.|+.+- ....++..+||+..+-||.|..+++..+- ..|+|+|+..
T Consensus 70 L~ei~ek-~l~~~g~~vlDLGaaPGgWsqva~~~~gv-~sV~Gvdlg~ 115 (300)
T 3eld_A 70 IRWLHER-GYLRITGRVLDLGCGRGGWSYYAAAQKEV-MSVKGYTLGI 115 (300)
T ss_dssp HHHHHHH-TSCCCCEEEEEETCTTCHHHHHHHTSTTE-EEEEEECCCC
T ss_pred HHHHHHh-CCCCCCCEEEEcCCCCCHHHHHHHHhcCC-ceeeeEEecc
Confidence 4455554 33458899999999999999999987654 3588999863
No 333
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=51.00 E-value=6.3 Score=35.71 Aligned_cols=29 Identities=24% Similarity=0.330 Sum_probs=24.6
Q ss_pred HhhHHHHHHHHHHHHHhhcCCCeEEEEee
Q 012954 340 NDELKTLESSLHACFDCLAPGGRLGVISF 368 (452)
Q Consensus 340 N~EL~~L~~~L~~a~~~L~pGGRLvVISF 368 (452)
...+..+..+|..+..+|+|||+|++...
T Consensus 171 ~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 199 (265)
T 2i62_A 171 CPDLPAYRTALRNLGSLLKPGGFLVMVDA 199 (265)
T ss_dssp CSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred cCChHHHHHHHHHHHhhCCCCcEEEEEec
Confidence 33567889999999999999999999863
No 334
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=50.98 E-value=6 Score=34.67 Aligned_cols=26 Identities=31% Similarity=0.448 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeecc
Q 012954 345 TLESSLHACFDCLAPGGRLGVISFHS 370 (452)
Q Consensus 345 ~L~~~L~~a~~~L~pGGRLvVISFHS 370 (452)
.+..+|..+..+|+|||++++.++|.
T Consensus 130 ~~~~~l~~~~~~L~pgG~l~~~~~~~ 155 (227)
T 3e8s_A 130 DIIELLSAMRTLLVPGGALVIQTLHP 155 (227)
T ss_dssp CCHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred hHHHHHHHHHHHhCCCeEEEEEecCc
Confidence 34578888899999999999999875
No 335
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=50.88 E-value=50 Score=30.30 Aligned_cols=81 Identities=15% Similarity=0.062 Sum_probs=53.5
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHH---HHhhhcccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKS---VLGQIDENILR 215 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~---~L~~~~~~l~~ 215 (452)
.|=|.||=-.++.+.+ ....+|+.+|++++.++...+.+...+ .++.++..+..+.+. ++.+... ..
T Consensus 17 VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~Dv~d~~~v~~~~~~~~~--~~ 87 (256)
T 3gaf_A 17 VTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAG-------GKAIGLECNVTDEQHREAVIKAALD--QF 87 (256)
T ss_dssp ECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTT-------CCEEEEECCTTCHHHHHHHHHHHHH--HH
T ss_pred EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CcEEEEECCCCCHHHHHHHHHHHHH--Hc
Confidence 4777777666666653 223469999999998888777776543 267777777665443 3333211 01
Q ss_pred cCccEEEEccCCCc
Q 012954 216 SGVDAILMDLGMSS 229 (452)
Q Consensus 216 ~~VDGILfDLGvSS 229 (452)
.++|.++-+=|++.
T Consensus 88 g~id~lv~nAg~~~ 101 (256)
T 3gaf_A 88 GKITVLVNNAGGGG 101 (256)
T ss_dssp SCCCEEEECCCCCC
T ss_pred CCCCEEEECCCCCC
Confidence 36999999999753
No 336
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=50.88 E-value=61 Score=29.45 Aligned_cols=80 Identities=18% Similarity=0.129 Sum_probs=51.2
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHH---HHhhhcccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKS---VLGQIDENILR 215 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~---~L~~~~~~l~~ 215 (452)
.|=|.||=-.++.+.+ ..+.+|+.+|++++.++...+.+...+ .++.++..+..+.++ .+.+... ..
T Consensus 12 VTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~Dv~~~~~~~~~~~~~~~--~~ 82 (247)
T 2jah_A 12 ITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAG-------AKVHVLELDVADRQGVDAAVASTVE--AL 82 (247)
T ss_dssp EESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------CCEEEEECCTTCHHHHHHHHHHHHH--HH
T ss_pred EECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-------CcEEEEECCCCCHHHHHHHHHHHHH--Hc
Confidence 4667777666666553 233479999999998887766665432 256777777665443 3332210 01
Q ss_pred cCccEEEEccCCC
Q 012954 216 SGVDAILMDLGMS 228 (452)
Q Consensus 216 ~~VDGILfDLGvS 228 (452)
..+|+++-+-|+.
T Consensus 83 g~id~lv~nAg~~ 95 (247)
T 2jah_A 83 GGLDILVNNAGIM 95 (247)
T ss_dssp SCCSEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 3699999999975
No 337
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=50.66 E-value=6.4 Score=37.04 Aligned_cols=25 Identities=12% Similarity=0.240 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeec
Q 012954 345 TLESSLHACFDCLAPGGRLGVISFH 369 (452)
Q Consensus 345 ~L~~~L~~a~~~L~pGGRLvVISFH 369 (452)
.+..+|..+..+|+|||+++++.++
T Consensus 150 d~~~~l~~~~r~LkpgG~l~i~~~~ 174 (292)
T 2aot_A 150 DIPATLKFFHSLLGTNAKMLIIVVS 174 (292)
T ss_dssp CHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred CHHHHHHHHHHHcCCCcEEEEEEec
Confidence 3567888899999999999998665
No 338
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=50.62 E-value=11 Score=34.75 Aligned_cols=39 Identities=18% Similarity=0.236 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHhhcCCCeEEEEeecchhHHHHHHHHHh
Q 012954 343 LKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLS 382 (452)
Q Consensus 343 L~~L~~~L~~a~~~L~pGGRLvVISFHSLEDRIVK~~F~~ 382 (452)
...++.+|..+..+|+|||+++++.-..-.+.+.. .+++
T Consensus 152 ~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~-~l~~ 190 (259)
T 3lpm_A 152 MCTLEDTIRVAASLLKQGGKANFVHRPERLLDIID-IMRK 190 (259)
T ss_dssp -HHHHHHHHHHHHHEEEEEEEEEEECTTTHHHHHH-HHHH
T ss_pred cCCHHHHHHHHHHHccCCcEEEEEEcHHHHHHHHH-HHHH
Confidence 35577899999999999999999764444444443 3443
No 339
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=50.53 E-value=21 Score=35.12 Aligned_cols=73 Identities=21% Similarity=0.230 Sum_probs=49.9
Q ss_pred EEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHH-HHhhhccccc
Q 012954 136 SFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKS-VLGQIDENIL 214 (452)
Q Consensus 136 iyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~-~L~~~~~~l~ 214 (452)
.++|.=.|.||=+..+.+.--.-..|+++|+|+.|++..+.+... ..+++++-..+.. .+.
T Consensus 4 ~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~-----------~~~~~~Di~~~~~~~~~------- 65 (343)
T 1g55_A 4 RVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPH-----------TQLLAKTIEGITLEEFD------- 65 (343)
T ss_dssp EEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT-----------SCEECSCGGGCCHHHHH-------
T ss_pred eEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccc-----------cccccCCHHHccHhHcC-------
Confidence 689999999999999987631123699999999999988775421 1234555544321 111
Q ss_pred ccCccEEEEccC
Q 012954 215 RSGVDAILMDLG 226 (452)
Q Consensus 215 ~~~VDGILfDLG 226 (452)
...+|.|+.+.=
T Consensus 66 ~~~~D~l~~gpP 77 (343)
T 1g55_A 66 RLSFDMILMSPP 77 (343)
T ss_dssp HHCCSEEEECCC
T ss_pred cCCcCEEEEcCC
Confidence 115899998864
No 340
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=50.28 E-value=69 Score=28.76 Aligned_cols=81 Identities=15% Similarity=0.208 Sum_probs=52.2
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHH---HHhhhcccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKS---VLGQIDENILR 215 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~---~L~~~~~~l~~ 215 (452)
.|=|.||=-.++.+.+ ....+|+.+|++++.++...+.++..+ .++.++..+..+.++ ++++... ..
T Consensus 10 ITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~~~~--~~ 80 (247)
T 3lyl_A 10 VTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKG-------FKARGLVLNISDIESIQNFFAEIKA--EN 80 (247)
T ss_dssp ESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT-------CCEEEEECCTTCHHHHHHHHHHHHH--TT
T ss_pred EECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CceEEEEecCCCHHHHHHHHHHHHH--Hc
Confidence 4666676555555542 223479999999998888777776543 257777777765443 3443211 12
Q ss_pred cCccEEEEccCCCc
Q 012954 216 SGVDAILMDLGMSS 229 (452)
Q Consensus 216 ~~VDGILfDLGvSS 229 (452)
..+|+++.+=|+..
T Consensus 81 ~~id~li~~Ag~~~ 94 (247)
T 3lyl_A 81 LAIDILVNNAGITR 94 (247)
T ss_dssp CCCSEEEECCCCCC
T ss_pred CCCCEEEECCCCCC
Confidence 36999999999864
No 341
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=50.26 E-value=68 Score=29.53 Aligned_cols=80 Identities=15% Similarity=0.125 Sum_probs=51.5
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHH---HHhhhcccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKS---VLGQIDENILR 215 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~---~L~~~~~~l~~ 215 (452)
.|=|.||=-.++.+.+ ..+..|+++|++++.++...+.++..+ .++.++..+..+.+. ++.+... ..
T Consensus 36 ITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~Dl~~~~~v~~~~~~~~~--~~ 106 (272)
T 1yb1_A 36 ITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG-------AKVHTFVVDCSNREDIYSSAKKVKA--EI 106 (272)
T ss_dssp EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------CCEEEEECCTTCHHHHHHHHHHHHH--HT
T ss_pred EECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcC-------CeEEEEEeeCCCHHHHHHHHHHHHH--HC
Confidence 4777777666666553 223469999999998877766665542 257777777765443 3333211 01
Q ss_pred cCccEEEEccCCC
Q 012954 216 SGVDAILMDLGMS 228 (452)
Q Consensus 216 ~~VDGILfDLGvS 228 (452)
..+|+++-+-|+.
T Consensus 107 g~iD~li~~Ag~~ 119 (272)
T 1yb1_A 107 GDVSILVNNAGVV 119 (272)
T ss_dssp CCCSEEEECCCCC
T ss_pred CCCcEEEECCCcC
Confidence 3699999999875
No 342
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=50.18 E-value=70 Score=29.16 Aligned_cols=80 Identities=10% Similarity=0.091 Sum_probs=51.6
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHH---HHHhhhcccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIK---SVLGQIDENILR 215 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~---~~L~~~~~~l~~ 215 (452)
.|=|.||=-.++.+.+ .....|+++|++++.++.+.+.+...+ .++.++..+..+.+ +++.+... ..
T Consensus 14 VTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~~~~--~~ 84 (260)
T 2ae2_A 14 VTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG-------FKVEASVCDLSSRSERQELMNTVAN--HF 84 (260)
T ss_dssp EESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------CEEEEEECCTTCHHHHHHHHHHHHH--HT
T ss_pred EECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CcEEEEEcCCCCHHHHHHHHHHHHH--Hc
Confidence 5777777666666653 233579999999988877666665432 26777777766544 33433211 01
Q ss_pred -cCccEEEEccCCC
Q 012954 216 -SGVDAILMDLGMS 228 (452)
Q Consensus 216 -~~VDGILfDLGvS 228 (452)
..+|.++-+-|+.
T Consensus 85 ~g~id~lv~~Ag~~ 98 (260)
T 2ae2_A 85 HGKLNILVNNAGIV 98 (260)
T ss_dssp TTCCCEEEECCCCC
T ss_pred CCCCCEEEECCCCC
Confidence 3699999999975
No 343
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=49.80 E-value=51 Score=30.33 Aligned_cols=82 Identities=15% Similarity=0.065 Sum_probs=53.4
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchH----HHHHhhhccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHI----KSVLGQIDENIL 214 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i----~~~L~~~~~~l~ 214 (452)
.|=|+||=-.++.+.+ ..+.+|+..|++++..+.+.+.|..... .++.++..+.++. ..++..... .
T Consensus 17 ITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~------~~~~~~~~Dl~~~~~~v~~~~~~~~~--~ 88 (311)
T 3o26_A 17 VTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNH------ENVVFHQLDVTDPIATMSSLADFIKT--H 88 (311)
T ss_dssp ESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC------CSEEEEECCTTSCHHHHHHHHHHHHH--H
T ss_pred EecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC------CceEEEEccCCCcHHHHHHHHHHHHH--h
Confidence 5777777666665553 2335799999999988877776765432 3677777666553 333332211 0
Q ss_pred ccCccEEEEccCCCc
Q 012954 215 RSGVDAILMDLGMSS 229 (452)
Q Consensus 215 ~~~VDGILfDLGvSS 229 (452)
...+|.++-+=|+..
T Consensus 89 ~g~iD~lv~nAg~~~ 103 (311)
T 3o26_A 89 FGKLDILVNNAGVAG 103 (311)
T ss_dssp HSSCCEEEECCCCCS
T ss_pred CCCCCEEEECCcccc
Confidence 137999999999874
No 344
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=49.77 E-value=15 Score=34.17 Aligned_cols=38 Identities=16% Similarity=0.216 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeecchhHHHHHHHHHh
Q 012954 345 TLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLS 382 (452)
Q Consensus 345 ~L~~~L~~a~~~L~pGGRLvVISFHSLEDRIVK~~F~~ 382 (452)
.+..++..+.++|+|||++++..+..-.-.-|++.+.+
T Consensus 196 ~~~~~l~~~~~~LkpgG~lils~~~~~~~~~v~~~l~~ 233 (254)
T 2nxc_A 196 LHAALAPRYREALVPGGRALLTGILKDRAPLVREAMAG 233 (254)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEEEGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCEEEEEeeccCCHHHHHHHHHH
Confidence 46788999999999999999977665555556666654
No 345
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=49.46 E-value=59 Score=29.23 Aligned_cols=81 Identities=20% Similarity=0.141 Sum_probs=52.1
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHH---HHhhhcccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKS---VLGQIDENILR 215 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~---~L~~~~~~l~~ 215 (452)
.|=|.||=-.++.+.+ .....|+++|++++.++...+.+...+ .++.++..+..+.++ .+++... ..
T Consensus 18 ItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~D~~~~~~~~~~~~~~~~--~~ 88 (260)
T 3awd_A 18 VTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEG-------HDVSSVVMDVTNTESVQNAVRSVHE--QE 88 (260)
T ss_dssp EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------CCEEEEECCTTCHHHHHHHHHHHHH--HH
T ss_pred EeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CceEEEEecCCCHHHHHHHHHHHHH--Hc
Confidence 4777777666666653 233479999999988776666665432 257777777766543 3332210 01
Q ss_pred cCccEEEEccCCCc
Q 012954 216 SGVDAILMDLGMSS 229 (452)
Q Consensus 216 ~~VDGILfDLGvSS 229 (452)
..+|.++.+-|+..
T Consensus 89 ~~id~vi~~Ag~~~ 102 (260)
T 3awd_A 89 GRVDILVACAGICI 102 (260)
T ss_dssp SCCCEEEECCCCCC
T ss_pred CCCCEEEECCCCCC
Confidence 36999999999754
No 346
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=49.42 E-value=99 Score=27.61 Aligned_cols=81 Identities=17% Similarity=0.128 Sum_probs=51.5
Q ss_pred EccCCChhHHHHHHhC-C-CCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHH---HHhhhccccc
Q 012954 140 CTLGAAGHSSAIIRAH-P-ELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKS---VLGQIDENIL 214 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p-~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~---~L~~~~~~l~ 214 (452)
.|=|.||=-.++.+.+ . ....|+.+|++++..+.+.+.+...+ .++.++..+..+... ++.+... .
T Consensus 9 ITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~Dl~~~~~~~~~~~~~~~--~ 79 (276)
T 1wma_A 9 VTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG-------LSPRFHQLDIDDLQSIRALRDFLRK--E 79 (276)
T ss_dssp ESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT-------CCCEEEECCTTCHHHHHHHHHHHHH--H
T ss_pred EeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcC-------CeeEEEECCCCCHHHHHHHHHHHHH--h
Confidence 5777777666666553 2 23579999999988877766665542 256667766665443 3333211 0
Q ss_pred ccCccEEEEccCCCc
Q 012954 215 RSGVDAILMDLGMSS 229 (452)
Q Consensus 215 ~~~VDGILfDLGvSS 229 (452)
...+|.++..-|+..
T Consensus 80 ~g~id~li~~Ag~~~ 94 (276)
T 1wma_A 80 YGGLDVLVNNAGIAF 94 (276)
T ss_dssp HSSEEEEEECCCCCC
T ss_pred cCCCCEEEECCcccc
Confidence 136999999888753
No 347
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=49.04 E-value=12 Score=33.81 Aligned_cols=26 Identities=15% Similarity=0.170 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeecc
Q 012954 345 TLESSLHACFDCLAPGGRLGVISFHS 370 (452)
Q Consensus 345 ~L~~~L~~a~~~L~pGGRLvVISFHS 370 (452)
.+..+|..+..+|+|||++++.+...
T Consensus 118 ~~~~~l~~~~~~LkpgG~l~~~~~~~ 143 (240)
T 3dli_A 118 RLFELLSLCYSKMKYSSYIVIESPNP 143 (240)
T ss_dssp GHHHHHHHHHHHBCTTCCEEEEEECT
T ss_pred HHHHHHHHHHHHcCCCcEEEEEeCCc
Confidence 45778888999999999999887764
No 348
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=49.01 E-value=73 Score=29.38 Aligned_cols=80 Identities=10% Similarity=0.054 Sum_probs=51.7
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHH---HHhhhcccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKS---VLGQIDENILR 215 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~---~L~~~~~~l~~ 215 (452)
.|=|.||=-.++.+.+ ....+|+.+|++++.++.+.+.+...+ .++.++..+..+.++ ++.+... ..
T Consensus 26 VTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~~~~--~~ 96 (273)
T 1ae1_A 26 VTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKG-------LNVEGSVCDLLSRTERDKLMQTVAH--VF 96 (273)
T ss_dssp EESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------CCEEEEECCTTCHHHHHHHHHHHHH--HT
T ss_pred EECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CceEEEECCCCCHHHHHHHHHHHHH--Hc
Confidence 5777777767766663 233579999999988877666665432 256677777665443 3333211 01
Q ss_pred -cCccEEEEccCCC
Q 012954 216 -SGVDAILMDLGMS 228 (452)
Q Consensus 216 -~~VDGILfDLGvS 228 (452)
..+|.++-+-|+.
T Consensus 97 ~g~id~lv~nAg~~ 110 (273)
T 1ae1_A 97 DGKLNILVNNAGVV 110 (273)
T ss_dssp TSCCCEEEECCCCC
T ss_pred CCCCcEEEECCCCC
Confidence 4699999999975
No 349
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=48.87 E-value=9.4 Score=33.63 Aligned_cols=27 Identities=15% Similarity=0.170 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHhhcCCCeEEEEeecc
Q 012954 344 KTLESSLHACFDCLAPGGRLGVISFHS 370 (452)
Q Consensus 344 ~~L~~~L~~a~~~L~pGGRLvVISFHS 370 (452)
..+..+|..+.++|+|||++++..++.
T Consensus 119 ~~~~~~l~~~~~~L~~gG~l~~~~~~~ 145 (227)
T 1ve3_A 119 LELNQVFKEVRRVLKPSGKFIMYFTDL 145 (227)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEecCh
Confidence 456788999999999999999988763
No 350
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=48.42 E-value=64 Score=30.22 Aligned_cols=81 Identities=7% Similarity=0.008 Sum_probs=53.6
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHH---HHHhhhcccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIK---SVLGQIDENILR 215 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~---~~L~~~~~~l~~ 215 (452)
.|=|.||=-.++.+.+ ..+.+|+.+|++.+.++.+.+.+...+ .++.++..+.++-+ .++.+... ..
T Consensus 33 VTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~Dv~d~~~v~~~~~~~~~--~~ 103 (283)
T 3v8b_A 33 ITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAG-------GQAIALEADVSDELQMRNAVRDLVL--KF 103 (283)
T ss_dssp EESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTT-------CCEEEEECCTTCHHHHHHHHHHHHH--HH
T ss_pred EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CcEEEEEccCCCHHHHHHHHHHHHH--Hh
Confidence 4777777666666653 234579999999999888777775542 25777777766543 33433211 12
Q ss_pred cCccEEEEccCCCc
Q 012954 216 SGVDAILMDLGMSS 229 (452)
Q Consensus 216 ~~VDGILfDLGvSS 229 (452)
..+|.++-+=|+..
T Consensus 104 g~iD~lVnnAg~~~ 117 (283)
T 3v8b_A 104 GHLDIVVANAGING 117 (283)
T ss_dssp SCCCEEEECCCCCC
T ss_pred CCCCEEEECCCCCC
Confidence 37999999999853
No 351
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=48.15 E-value=77 Score=28.98 Aligned_cols=80 Identities=14% Similarity=0.099 Sum_probs=52.9
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHH---Hhhhcccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSV---LGQIDENILR 215 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~---L~~~~~~l~~ 215 (452)
.|=|.||=-.++.+.+ ..+.+|+.+|++++.++...+.+...+ .++.++..+.++.+++ +.+... ..
T Consensus 34 ITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~v~~~~~~~~~--~~ 104 (262)
T 3rkr_A 34 VTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAG-------GEAESHACDLSHSDAIAAFATGVLA--AH 104 (262)
T ss_dssp ESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------CEEEEEECCTTCHHHHHHHHHHHHH--HH
T ss_pred EECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC-------CceeEEEecCCCHHHHHHHHHHHHH--hc
Confidence 4777776555555552 233479999999999888877776543 2677788777765543 333211 12
Q ss_pred cCccEEEEccCCC
Q 012954 216 SGVDAILMDLGMS 228 (452)
Q Consensus 216 ~~VDGILfDLGvS 228 (452)
..+|+++.+=|++
T Consensus 105 g~id~lv~~Ag~~ 117 (262)
T 3rkr_A 105 GRCDVLVNNAGVG 117 (262)
T ss_dssp SCCSEEEECCCCC
T ss_pred CCCCEEEECCCcc
Confidence 3699999999984
No 352
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=47.92 E-value=66 Score=29.43 Aligned_cols=85 Identities=14% Similarity=0.087 Sum_probs=54.2
Q ss_pred CCEEEEEccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHH---Hhhh
Q 012954 134 ITSFVDCTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSV---LGQI 209 (452)
Q Consensus 134 ggiyVDaTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~---L~~~ 209 (452)
+.+++ .|=|.||=-.++.+.+ ....+|+.+|++++.++...+.+...+ .++.++..+..+.+++ +.+.
T Consensus 7 ~k~vl-VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~~ 78 (262)
T 1zem_A 7 GKVCL-VTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKG-------VEARSYVCDVTSEEAVIGTVDSV 78 (262)
T ss_dssp TCEEE-EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT-------SCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CcEEEEEecCCCHHHHHHHHHHH
Confidence 34433 5777777777776663 233579999999988877766665432 2567777776655433 3322
Q ss_pred cccccccCccEEEEccCCC
Q 012954 210 DENILRSGVDAILMDLGMS 228 (452)
Q Consensus 210 ~~~l~~~~VDGILfDLGvS 228 (452)
.. ....+|.++-+-|+.
T Consensus 79 ~~--~~g~id~lv~nAg~~ 95 (262)
T 1zem_A 79 VR--DFGKIDFLFNNAGYQ 95 (262)
T ss_dssp HH--HHSCCCEEEECCCCC
T ss_pred HH--HhCCCCEEEECCCCC
Confidence 10 013699999999975
No 353
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=47.77 E-value=70 Score=29.64 Aligned_cols=80 Identities=15% Similarity=0.101 Sum_probs=50.4
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHH---HHhhhcccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKS---VLGQIDENILR 215 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~---~L~~~~~~l~~ 215 (452)
.|=|.||=-.++.+.+ .....|+++|++++.++.+.+.+...+ .++.++..+..+.++ ++.+... ..
T Consensus 27 VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~Dv~~~~~v~~~~~~~~~--~~ 97 (277)
T 2rhc_B 27 VTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG-------VEADGRTCDVRSVPEIEALVAAVVE--RY 97 (277)
T ss_dssp EETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------CCEEEEECCTTCHHHHHHHHHHHHH--HT
T ss_pred EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CceEEEECCCCCHHHHHHHHHHHHH--Hh
Confidence 4667776666665553 223479999999988877666665432 256677777665443 3332211 01
Q ss_pred cCccEEEEccCCC
Q 012954 216 SGVDAILMDLGMS 228 (452)
Q Consensus 216 ~~VDGILfDLGvS 228 (452)
..+|.++-+-|+.
T Consensus 98 g~iD~lv~~Ag~~ 110 (277)
T 2rhc_B 98 GPVDVLVNNAGRP 110 (277)
T ss_dssp CSCSEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 3699999999975
No 354
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=47.62 E-value=74 Score=29.30 Aligned_cols=81 Identities=23% Similarity=0.222 Sum_probs=53.9
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhh-hccCCCCCCceEEEEccCcch---HHHHHhhhccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNS-LLHGQAHPHLKTHTFAKNFRH---IKSVLGQIDENIL 214 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~-~~~~~~~~~~r~~li~~nF~~---i~~~L~~~~~~l~ 214 (452)
.|=|.||=-.++.+.+ ....+|+.+|++++.++.+.+.+.. .+ .++.++..+.++ +.+++.+... .
T Consensus 25 VTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-------~~~~~~~~Dv~~~~~v~~~~~~~~~--~ 95 (266)
T 4egf_A 25 ITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFG-------TDVHTVAIDLAEPDAPAELARRAAE--A 95 (266)
T ss_dssp ETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC-------CCEEEEECCTTSTTHHHHHHHHHHH--H
T ss_pred EeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-------CcEEEEEecCCCHHHHHHHHHHHHH--H
Confidence 4888888777777663 3345799999999998887776655 32 257777766554 4444443211 1
Q ss_pred ccCccEEEEccCCCc
Q 012954 215 RSGVDAILMDLGMSS 229 (452)
Q Consensus 215 ~~~VDGILfDLGvSS 229 (452)
...+|.++-+=|++.
T Consensus 96 ~g~id~lv~nAg~~~ 110 (266)
T 4egf_A 96 FGGLDVLVNNAGISH 110 (266)
T ss_dssp HTSCSEEEEECCCCC
T ss_pred cCCCCEEEECCCcCC
Confidence 237999999999864
No 355
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=47.35 E-value=75 Score=29.17 Aligned_cols=82 Identities=11% Similarity=0.016 Sum_probs=53.2
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhh-hccCCCCCCceEEEEccCcchHHH---HHhhhccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNS-LLHGQAHPHLKTHTFAKNFRHIKS---VLGQIDENIL 214 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~-~~~~~~~~~~r~~li~~nF~~i~~---~L~~~~~~l~ 214 (452)
.|=|.||=-.++.+.+ ....+|+.+|++++.++.+.+.+.. ++. .++.++..+.++.++ ++.+... .
T Consensus 13 VTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~------~~~~~~~~Dv~~~~~v~~~~~~~~~--~ 84 (265)
T 3lf2_A 13 VTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPG------ARLFASVCDVLDALQVRAFAEACER--T 84 (265)
T ss_dssp EETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTT------CCEEEEECCTTCHHHHHHHHHHHHH--H
T ss_pred EeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC------ceEEEEeCCCCCHHHHHHHHHHHHH--H
Confidence 4777777666666653 2335799999999999888777765 321 247777777665443 3433211 1
Q ss_pred ccCccEEEEccCCCc
Q 012954 215 RSGVDAILMDLGMSS 229 (452)
Q Consensus 215 ~~~VDGILfDLGvSS 229 (452)
...+|.++-+=|++.
T Consensus 85 ~g~id~lvnnAg~~~ 99 (265)
T 3lf2_A 85 LGCASILVNNAGQGR 99 (265)
T ss_dssp HCSCSEEEECCCCCC
T ss_pred cCCCCEEEECCCCCC
Confidence 236999999999753
No 356
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=47.33 E-value=51 Score=30.70 Aligned_cols=77 Identities=17% Similarity=0.106 Sum_probs=50.4
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhcccccccCc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGV 218 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~l~~~~V 218 (452)
.|=|+||=-.++.+.+ ..+.+|+.+|++++..+.+.+.+ + .++.++..+.++.+++-.-... ...+
T Consensus 21 VTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~---~-------~~~~~~~~Dl~d~~~v~~~~~~---~~~i 87 (291)
T 3rd5_A 21 ITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM---A-------GQVEVRELDLQDLSSVRRFADG---VSGA 87 (291)
T ss_dssp EECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS---S-------SEEEEEECCTTCHHHHHHHHHT---CCCE
T ss_pred EeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---c-------CCeeEEEcCCCCHHHHHHHHHh---cCCC
Confidence 5777777666666653 23357999999998876654432 1 2677888777766554322210 1369
Q ss_pred cEEEEccCCCc
Q 012954 219 DAILMDLGMSS 229 (452)
Q Consensus 219 DGILfDLGvSS 229 (452)
|.++-+=|+..
T Consensus 88 D~lv~nAg~~~ 98 (291)
T 3rd5_A 88 DVLINNAGIMA 98 (291)
T ss_dssp EEEEECCCCCS
T ss_pred CEEEECCcCCC
Confidence 99999999864
No 357
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=47.22 E-value=9 Score=33.37 Aligned_cols=26 Identities=15% Similarity=0.281 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHhhcCCCeEEEEeec
Q 012954 344 KTLESSLHACFDCLAPGGRLGVISFH 369 (452)
Q Consensus 344 ~~L~~~L~~a~~~L~pGGRLvVISFH 369 (452)
.....+|..+..+|+|||++++..+.
T Consensus 105 ~~~~~~l~~~~~~LkpgG~l~~~~~~ 130 (209)
T 2p8j_A 105 NDVKEAIDEIKRVLKPGGLACINFLT 130 (209)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 45778899999999999999877664
No 358
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=47.21 E-value=8.6 Score=32.51 Aligned_cols=25 Identities=16% Similarity=0.266 Sum_probs=21.5
Q ss_pred HHHHHHHHHHhhcCCCeEEEEeecc
Q 012954 346 LESSLHACFDCLAPGGRLGVISFHS 370 (452)
Q Consensus 346 L~~~L~~a~~~L~pGGRLvVISFHS 370 (452)
...+|..+.++|+|||++++..+..
T Consensus 91 ~~~~l~~~~~~L~pgG~l~~~~~~~ 115 (170)
T 3i9f_A 91 KQHVISEVKRILKDDGRVIIIDWRK 115 (170)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred HHHHHHHHHHhcCCCCEEEEEEcCc
Confidence 4678888899999999999998754
No 359
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=47.06 E-value=90 Score=28.08 Aligned_cols=81 Identities=6% Similarity=-0.003 Sum_probs=50.6
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeC-CHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHH---HHhhhccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDV-DPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKS---VLGQIDENIL 214 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDr-D~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~---~L~~~~~~l~ 214 (452)
.|=|.||=-.++.+.+ ....+|+++|+ +++.++...+.+...+ .++.++..+..+.++ ++++... .
T Consensus 12 ITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~-------~~~~~~~~D~~~~~~~~~~~~~~~~--~ 82 (261)
T 1gee_A 12 ITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVG-------GEAIAVKGDVTVESDVINLVQSAIK--E 82 (261)
T ss_dssp ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-------CEEEEEECCTTSHHHHHHHHHHHHH--H
T ss_pred EeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcC-------CceEEEECCCCCHHHHHHHHHHHHH--H
Confidence 4777777666666553 22347999999 8877766655565432 257777777665443 3333211 0
Q ss_pred ccCccEEEEccCCCc
Q 012954 215 RSGVDAILMDLGMSS 229 (452)
Q Consensus 215 ~~~VDGILfDLGvSS 229 (452)
...+|.++.+-|+..
T Consensus 83 ~g~id~li~~Ag~~~ 97 (261)
T 1gee_A 83 FGKLDVMINNAGLEN 97 (261)
T ss_dssp HSCCCEEEECCCCCC
T ss_pred cCCCCEEEECCCCCC
Confidence 136999999999753
No 360
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=46.86 E-value=70 Score=30.28 Aligned_cols=80 Identities=14% Similarity=0.172 Sum_probs=55.5
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcch---HHHHHhhhcccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRH---IKSVLGQIDENILR 215 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~---i~~~L~~~~~~l~~ 215 (452)
.|=|.+|==.++.+.+ ....+|+..|++++.++.+.+.++..+. ++..+..+.++ ++.++++... ..
T Consensus 12 VTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~-------~~~~~~~Dvt~~~~v~~~~~~~~~--~~ 82 (254)
T 4fn4_A 12 VTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGK-------EVLGVKADVSKKKDVEEFVRRTFE--TY 82 (254)
T ss_dssp EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-------CEEEEECCTTSHHHHHHHHHHHHH--HH
T ss_pred EeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCC-------cEEEEEccCCCHHHHHHHHHHHHH--Hc
Confidence 4878888777777663 3456899999999999998888877643 56667666554 4444443211 12
Q ss_pred cCccEEEEccCCC
Q 012954 216 SGVDAILMDLGMS 228 (452)
Q Consensus 216 ~~VDGILfDLGvS 228 (452)
.++|.++-+=|+.
T Consensus 83 G~iDiLVNNAGi~ 95 (254)
T 4fn4_A 83 SRIDVLCNNAGIM 95 (254)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCccc
Confidence 4799999999874
No 361
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=46.81 E-value=8.3 Score=34.38 Aligned_cols=26 Identities=19% Similarity=0.405 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeecc
Q 012954 345 TLESSLHACFDCLAPGGRLGVISFHS 370 (452)
Q Consensus 345 ~L~~~L~~a~~~L~pGGRLvVISFHS 370 (452)
.+..+|..+.++|+|||++++..+|.
T Consensus 122 ~~~~~l~~~~~~L~pgG~l~~~~~~~ 147 (243)
T 3bkw_A 122 DVARLFRTVHQALSPGGHFVFSTEHP 147 (243)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred hHHHHHHHHHHhcCcCcEEEEEeCCc
Confidence 35678899999999999999998875
No 362
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=46.76 E-value=14 Score=36.45 Aligned_cols=28 Identities=4% Similarity=0.090 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHhhcCCCeEEEEeecch
Q 012954 344 KTLESSLHACFDCLAPGGRLGVISFHSL 371 (452)
Q Consensus 344 ~~L~~~L~~a~~~L~pGGRLvVISFHSL 371 (452)
...+.+++.+.+.|+|||+|++...|.+
T Consensus 199 ~d~~~~l~el~r~LkPGG~Lvv~~~~~~ 226 (298)
T 3fpf_A 199 EPKRRVFRNIHRYVDTETRIIYRTYTGM 226 (298)
T ss_dssp SCHHHHHHHHHHHCCTTCEEEEEECCGG
T ss_pred cCHHHHHHHHHHHcCCCcEEEEEcCcch
Confidence 4567888999999999999999998865
No 363
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=46.59 E-value=10 Score=35.88 Aligned_cols=29 Identities=24% Similarity=0.283 Sum_probs=24.9
Q ss_pred HHHhhHHHHHHHHHHHHHhhcCCCeEEEE
Q 012954 338 AVNDELKTLESSLHACFDCLAPGGRLGVI 366 (452)
Q Consensus 338 ~VN~EL~~L~~~L~~a~~~L~pGGRLvVI 366 (452)
..|..-+.+..+|..+.++|+|||+|++-
T Consensus 191 hl~~~~~~~~~~l~~~~~~LkpGG~lil~ 219 (292)
T 3g07_A 191 HLNWGDEGLKRMFRRIYRHLRPGGILVLE 219 (292)
T ss_dssp HHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhcCCHHHHHHHHHHHHHHhCCCcEEEEe
Confidence 44667778999999999999999999875
No 364
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=46.54 E-value=7.1 Score=36.29 Aligned_cols=28 Identities=14% Similarity=0.118 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeecchh
Q 012954 345 TLESSLHACFDCLAPGGRLGVISFHSLE 372 (452)
Q Consensus 345 ~L~~~L~~a~~~L~pGGRLvVISFHSLE 372 (452)
.+..+|..+.++|+|||+++++++.+-+
T Consensus 201 ~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 228 (286)
T 3m70_A 201 RVPSIIKNMKEHTNVGGYNLIVAAMSTD 228 (286)
T ss_dssp GHHHHHHHHHHTEEEEEEEEEEEEBCCS
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEecCCC
Confidence 4567888899999999999998875543
No 365
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=46.37 E-value=9.3 Score=35.89 Aligned_cols=27 Identities=19% Similarity=0.202 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHhhcCCCeEEEEeecc
Q 012954 344 KTLESSLHACFDCLAPGGRLGVISFHS 370 (452)
Q Consensus 344 ~~L~~~L~~a~~~L~pGGRLvVISFHS 370 (452)
+.+..+|..+..+|+|||+|++.+++.
T Consensus 167 ~~~~~~l~~~~~~L~pgG~l~~~~~~~ 193 (299)
T 3g2m_A 167 ADRRGLYASVREHLEPGGKFLLSLAMS 193 (299)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEeecC
Confidence 456788999999999999999888775
No 366
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=46.27 E-value=9.1 Score=34.55 Aligned_cols=29 Identities=21% Similarity=0.503 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHhhcCCCeEEEEeecchh
Q 012954 344 KTLESSLHACFDCLAPGGRLGVISFHSLE 372 (452)
Q Consensus 344 ~~L~~~L~~a~~~L~pGGRLvVISFHSLE 372 (452)
.....+|..+..+|+|||++++..+..-+
T Consensus 136 ~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 164 (266)
T 3ujc_A 136 ENKNKLFQKCYKWLKPTGTLLITDYCATE 164 (266)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEEEESC
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 56678899999999999999999875444
No 367
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=46.20 E-value=72 Score=28.91 Aligned_cols=81 Identities=11% Similarity=0.075 Sum_probs=50.7
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHH---HHHhhhcccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIK---SVLGQIDENILR 215 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~---~~L~~~~~~l~~ 215 (452)
.|=|.||=-.++.+.+ .....|+++|++++.++...+.+...+ .++.++..+..+.+ +++.+.... ..
T Consensus 19 ITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~~~~~-~~ 90 (266)
T 1xq1_A 19 VTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKG-------FQVTGSVCDASLRPEREKLMQTVSSM-FG 90 (266)
T ss_dssp ETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------CCEEEEECCTTSHHHHHHHHHHHHHH-HT
T ss_pred EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CeeEEEECCCCCHHHHHHHHHHHHHH-hC
Confidence 5777777666666653 223479999999988877666565432 25667777766543 334332110 00
Q ss_pred cCccEEEEccCCC
Q 012954 216 SGVDAILMDLGMS 228 (452)
Q Consensus 216 ~~VDGILfDLGvS 228 (452)
..+|.++.+-|+.
T Consensus 91 ~~id~li~~Ag~~ 103 (266)
T 1xq1_A 91 GKLDILINNLGAI 103 (266)
T ss_dssp TCCSEEEEECCC-
T ss_pred CCCcEEEECCCCC
Confidence 3699999999975
No 368
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=46.15 E-value=1.3e+02 Score=27.68 Aligned_cols=81 Identities=12% Similarity=0.189 Sum_probs=53.6
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHH---Hhhhcccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSV---LGQIDENILR 215 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~---L~~~~~~l~~ 215 (452)
.|=|.||=-.++.+.+ .....|+++|++++.++...+.++..+ .++.++..+..+.+.+ +.+... ..
T Consensus 49 ITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~Dl~d~~~v~~~~~~~~~--~~ 119 (285)
T 2c07_A 49 VTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFG-------YESSGYAGDVSKKEEISEVINKILT--EH 119 (285)
T ss_dssp EESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTT-------CCEEEEECCTTCHHHHHHHHHHHHH--HC
T ss_pred EECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcC-------CceeEEECCCCCHHHHHHHHHHHHH--hc
Confidence 6878888777877774 334578899999988877666665432 2567777777665443 332210 01
Q ss_pred cCccEEEEccCCCc
Q 012954 216 SGVDAILMDLGMSS 229 (452)
Q Consensus 216 ~~VDGILfDLGvSS 229 (452)
..+|+++.+-|+..
T Consensus 120 ~~id~li~~Ag~~~ 133 (285)
T 2c07_A 120 KNVDILVNNAGITR 133 (285)
T ss_dssp SCCCEEEECCCCCC
T ss_pred CCCCEEEECCCCCC
Confidence 36999999999753
No 369
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=46.13 E-value=13 Score=35.28 Aligned_cols=28 Identities=21% Similarity=0.278 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHhhcCCCeEEEEeecc
Q 012954 343 LKTLESSLHACFDCLAPGGRLGVISFHS 370 (452)
Q Consensus 343 L~~L~~~L~~a~~~L~pGGRLvVISFHS 370 (452)
+..+..+|..+..+|+|||++++.++.+
T Consensus 131 ~~~~~~~l~~~~~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 131 YEQADMMLRNACERLSPGGYFIGTTPNS 158 (313)
T ss_dssp HHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred HHHHHHHHHHHHHHhCCCcEEEEecCCh
Confidence 4567789999999999999999999887
No 370
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=46.10 E-value=25 Score=30.77 Aligned_cols=23 Identities=13% Similarity=0.185 Sum_probs=19.3
Q ss_pred HHHHHHHHHhhcCCCeEEEEeec
Q 012954 347 ESSLHACFDCLAPGGRLGVISFH 369 (452)
Q Consensus 347 ~~~L~~a~~~L~pGGRLvVISFH 369 (452)
..+|..+.++|+|||++++..+.
T Consensus 125 ~~~l~~~~~~LkpgG~l~i~~~~ 147 (220)
T 3hnr_A 125 NVAIAKYSQLLNKGGKIVFADTI 147 (220)
T ss_dssp HHHHHHHHHHSCTTCEEEEEEEC
T ss_pred HHHHHHHHHhcCCCCEEEEEecc
Confidence 45788889999999999998744
No 371
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=46.01 E-value=6.9 Score=34.17 Aligned_cols=26 Identities=27% Similarity=0.249 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeecc
Q 012954 345 TLESSLHACFDCLAPGGRLGVISFHS 370 (452)
Q Consensus 345 ~L~~~L~~a~~~L~pGGRLvVISFHS 370 (452)
.+..+|..+..+|+|||++++..+..
T Consensus 119 ~~~~~l~~~~~~L~pgG~l~i~~~~~ 144 (203)
T 3h2b_A 119 ELPDALVALRMAVEDGGGLLMSFFSG 144 (203)
T ss_dssp THHHHHHHHHHTEEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHcCCCcEEEEEEccC
Confidence 45678888899999999999887543
No 372
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=45.92 E-value=6.9 Score=35.15 Aligned_cols=25 Identities=16% Similarity=0.316 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeec
Q 012954 345 TLESSLHACFDCLAPGGRLGVISFH 369 (452)
Q Consensus 345 ~L~~~L~~a~~~L~pGGRLvVISFH 369 (452)
....+|..+..+|+|||+|+++.|.
T Consensus 149 ~~~~~l~~~~~~LkpgG~l~~~~~~ 173 (235)
T 3lcc_A 149 MRPAWAKSMYELLKPDGELITLMYP 173 (235)
T ss_dssp GHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHCCCCcEEEEEEec
Confidence 4567788889999999999998874
No 373
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=45.68 E-value=1.2e+02 Score=28.43 Aligned_cols=89 Identities=9% Similarity=0.015 Sum_probs=55.0
Q ss_pred CCEEEEEccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHH---HHhhh
Q 012954 134 ITSFVDCTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKS---VLGQI 209 (452)
Q Consensus 134 ggiyVDaTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~---~L~~~ 209 (452)
+.+++ .|=|.||=-.++.+.+ ..+.+|+.+|++++.++.+.+.+...+.. ..++.++..+..+.+. ++.+.
T Consensus 26 ~k~vl-VTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~ 100 (297)
T 1xhl_A 26 GKSVI-ITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVP----AEKINAVVADVTEASGQDDIINTT 100 (297)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCC----GGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCC----CceEEEEecCCCCHHHHHHHHHHH
Confidence 44433 5888888777776663 23457999999999887766666543210 1156677777665443 33322
Q ss_pred cccccccCccEEEEccCCCc
Q 012954 210 DENILRSGVDAILMDLGMSS 229 (452)
Q Consensus 210 ~~~l~~~~VDGILfDLGvSS 229 (452)
.. ....+|.++-+-|+..
T Consensus 101 ~~--~~g~iD~lvnnAG~~~ 118 (297)
T 1xhl_A 101 LA--KFGKIDILVNNAGANL 118 (297)
T ss_dssp HH--HHSCCCEEEECCCCCC
T ss_pred HH--hcCCCCEEEECCCcCc
Confidence 10 0136999999999753
No 374
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=45.58 E-value=9 Score=33.61 Aligned_cols=26 Identities=31% Similarity=0.373 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeecc
Q 012954 345 TLESSLHACFDCLAPGGRLGVISFHS 370 (452)
Q Consensus 345 ~L~~~L~~a~~~L~pGGRLvVISFHS 370 (452)
....+|..+..+|+|||++++.+++.
T Consensus 110 ~~~~~l~~~~~~L~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 110 DVERVLLEARRVLRPGGALVVGVLEA 135 (211)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred CHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 35678888999999999999988764
No 375
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=45.02 E-value=81 Score=28.37 Aligned_cols=80 Identities=14% Similarity=0.051 Sum_probs=52.1
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHH---Hhhhcccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSV---LGQIDENILR 215 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~---L~~~~~~l~~ 215 (452)
.|=|.||=-.++.+.+ ....+|+.+|++++.++...+.++..+ .++.++..+..+.+++ +.+... ..
T Consensus 14 ITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~~~~--~~ 84 (253)
T 3qiv_A 14 VTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADG-------GTAISVAVDVSDPESAKAMADRTLA--EF 84 (253)
T ss_dssp EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------CEEEEEECCTTSHHHHHHHHHHHHH--HH
T ss_pred EECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC-------CcEEEEEccCCCHHHHHHHHHHHHH--Hc
Confidence 4666666555555552 223479999999999888777776542 2677787777765443 332211 01
Q ss_pred cCccEEEEccCCC
Q 012954 216 SGVDAILMDLGMS 228 (452)
Q Consensus 216 ~~VDGILfDLGvS 228 (452)
..+|.++-+=|+.
T Consensus 85 g~id~li~~Ag~~ 97 (253)
T 3qiv_A 85 GGIDYLVNNAAIF 97 (253)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCcC
Confidence 3799999999985
No 376
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=44.97 E-value=15 Score=38.25 Aligned_cols=37 Identities=19% Similarity=0.299 Sum_probs=27.7
Q ss_pred HHHHHHHHHhhcCCCeEEEEe--ecchhHH-HHHHHHHhh
Q 012954 347 ESSLHACFDCLAPGGRLGVIS--FHSLEDR-IVKQTFLSI 383 (452)
Q Consensus 347 ~~~L~~a~~~L~pGGRLvVIS--FHSLEDR-IVK~~F~~~ 383 (452)
...|..+..+|+|||+|++.| +|.-|+. +|..++.++
T Consensus 226 ~~iL~~a~~~LkpGG~LvysTcs~~~~Ene~vv~~~l~~~ 265 (479)
T 2frx_A 226 RELIDSAFHALRPGGTLVYSTCTLNQEENEAVCLWLKETY 265 (479)
T ss_dssp HHHHHHHHHHEEEEEEEEEEESCCSSTTTHHHHHHHHHHS
T ss_pred HHHHHHHHHhcCCCCEEEEecccCCcccCHHHHHHHHHHC
Confidence 467888999999999998764 5667776 556655543
No 377
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=44.91 E-value=4.9 Score=36.46 Aligned_cols=28 Identities=25% Similarity=0.360 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHhhcCCCeEEEEeecch
Q 012954 344 KTLESSLHACFDCLAPGGRLGVISFHSL 371 (452)
Q Consensus 344 ~~L~~~L~~a~~~L~pGGRLvVISFHSL 371 (452)
..++.+|..+.++|+|||+++++.+.+.
T Consensus 147 ~~~~~~l~~~~r~LkpgG~l~~~~~~~~ 174 (236)
T 1zx0_A 147 HQFNFIKNHAFRLLKPGGVLTYCNLTSW 174 (236)
T ss_dssp HHHHHHHHTHHHHEEEEEEEEECCHHHH
T ss_pred hhHHHHHHHHHHhcCCCeEEEEEecCcH
Confidence 3456788899999999999999887754
No 378
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=44.81 E-value=15 Score=33.93 Aligned_cols=28 Identities=11% Similarity=0.172 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeecchh
Q 012954 345 TLESSLHACFDCLAPGGRLGVISFHSLE 372 (452)
Q Consensus 345 ~L~~~L~~a~~~L~pGGRLvVISFHSLE 372 (452)
....+|..+..+|+|||++++.++..-.
T Consensus 146 ~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 173 (287)
T 1kpg_A 146 RYDAFFSLAHRLLPADGVMLLHTITGLH 173 (287)
T ss_dssp THHHHHHHHHHHSCTTCEEEEEEEEECC
T ss_pred HHHHHHHHHHHhcCCCCEEEEEEecCCC
Confidence 4577888899999999999998877543
No 379
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=44.80 E-value=26 Score=31.47 Aligned_cols=23 Identities=13% Similarity=0.190 Sum_probs=20.0
Q ss_pred HHHHHHHHHhhcCCCeEEEEeec
Q 012954 347 ESSLHACFDCLAPGGRLGVISFH 369 (452)
Q Consensus 347 ~~~L~~a~~~L~pGGRLvVISFH 369 (452)
..+|..+..+|+|||+|++.|-+
T Consensus 133 ~~~l~~~~~~LkpgG~l~~~td~ 155 (213)
T 2fca_A 133 SHFLKKYEEVMGKGGSIHFKTDN 155 (213)
T ss_dssp HHHHHHHHHHHTTSCEEEEEESC
T ss_pred HHHHHHHHHHcCCCCEEEEEeCC
Confidence 56788889999999999999854
No 380
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=44.68 E-value=1.2e+02 Score=28.02 Aligned_cols=81 Identities=15% Similarity=0.165 Sum_probs=49.7
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchH---HHHHhhhcccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHI---KSVLGQIDENILR 215 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i---~~~L~~~~~~l~~ 215 (452)
.|=|.||=-.++.+.+ ..+.+|+++|++++.++...+.+...+. .++.++..+..+. .+++.+... ..
T Consensus 33 ITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~------~~~~~~~~Dl~d~~~v~~~~~~~~~--~~ 104 (286)
T 1xu9_A 33 VTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGA------ASAHYIAGTMEDMTFAEQFVAQAGK--LM 104 (286)
T ss_dssp ESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC------SEEEEEECCTTCHHHHHHHHHHHHH--HH
T ss_pred EeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCC------CceEEEeCCCCCHHHHHHHHHHHHH--Hc
Confidence 5767776555555442 2234799999999988877666655421 2577777776654 333433211 01
Q ss_pred cCccEEEEc-cCCC
Q 012954 216 SGVDAILMD-LGMS 228 (452)
Q Consensus 216 ~~VDGILfD-LGvS 228 (452)
..+|.++.+ -|+.
T Consensus 105 g~iD~li~naag~~ 118 (286)
T 1xu9_A 105 GGLDMLILNHITNT 118 (286)
T ss_dssp TSCSEEEECCCCCC
T ss_pred CCCCEEEECCccCC
Confidence 369999888 6765
No 381
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=44.62 E-value=12 Score=39.05 Aligned_cols=35 Identities=31% Similarity=0.383 Sum_probs=27.0
Q ss_pred HHHHHHHHHhhcCCCeEEE--EeecchhHHHHHHHHH
Q 012954 347 ESSLHACFDCLAPGGRLGV--ISFHSLEDRIVKQTFL 381 (452)
Q Consensus 347 ~~~L~~a~~~L~pGGRLvV--ISFHSLEDRIVK~~F~ 381 (452)
...|..+..+|+|||+|+. .|+|.-|..-|-..|.
T Consensus 209 ~~iL~~a~~~LkpGG~LvysTCs~~~eEne~vv~~~l 245 (464)
T 3m6w_A 209 KALLAQASRLLGPGGVLVYSTCTFAPEENEGVVAHFL 245 (464)
T ss_dssp HHHHHHHHTTEEEEEEEEEEESCCCGGGTHHHHHHHH
T ss_pred HHHHHHHHHhcCCCcEEEEEeccCchhcCHHHHHHHH
Confidence 6788999999999999987 4677777665444443
No 382
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=44.58 E-value=68 Score=29.45 Aligned_cols=81 Identities=20% Similarity=0.128 Sum_probs=52.5
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCC------------HHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHH-
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVD------------PSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSV- 205 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD------------~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~- 205 (452)
.|=|.||=-.++.+.+ ..+.+|+.+|++ .+.++.+.+.+...+ .++.++..+.++..++
T Consensus 15 VTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~v~ 87 (287)
T 3pxx_A 15 VTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG-------RKAYTAEVDVRDRAAVS 87 (287)
T ss_dssp EETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT-------SCEEEEECCTTCHHHHH
T ss_pred EeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC-------CceEEEEccCCCHHHHH
Confidence 4777777666666653 234579999998 777777666665543 2677788777665443
Q ss_pred --HhhhcccccccCccEEEEccCCCc
Q 012954 206 --LGQIDENILRSGVDAILMDLGMSS 229 (452)
Q Consensus 206 --L~~~~~~l~~~~VDGILfDLGvSS 229 (452)
+.+... ....+|.++-+=|+..
T Consensus 88 ~~~~~~~~--~~g~id~lv~nAg~~~ 111 (287)
T 3pxx_A 88 RELANAVA--EFGKLDVVVANAGICP 111 (287)
T ss_dssp HHHHHHHH--HHSCCCEEEECCCCCC
T ss_pred HHHHHHHH--HcCCCCEEEECCCcCc
Confidence 333211 0136999999999864
No 383
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=44.26 E-value=15 Score=35.66 Aligned_cols=39 Identities=21% Similarity=0.376 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHhhcCCCeEEEEeecchh-HHHHHHHHH
Q 012954 343 LKTLESSLHACFDCLAPGGRLGVISFHSLE-DRIVKQTFL 381 (452)
Q Consensus 343 L~~L~~~L~~a~~~L~pGGRLvVISFHSLE-DRIVK~~F~ 381 (452)
.+..+.+|..+..+|+|||+++|++...+. ....++.|.
T Consensus 279 ~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~l~~~f~ 318 (343)
T 2pjd_A 279 LDAAQTLIRGAVRHLNSGGELRIVANAFLPYPDVLDETFG 318 (343)
T ss_dssp HHHHHHHHHHHGGGEEEEEEEEEEEETTSSHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhCCCCcEEEEEEcCCCCcHHHHHHhcC
Confidence 356788999999999999999998765543 345555554
No 384
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=44.22 E-value=11 Score=34.66 Aligned_cols=28 Identities=18% Similarity=0.192 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHhhcCCCeEEEEeecc
Q 012954 343 LKTLESSLHACFDCLAPGGRLGVISFHS 370 (452)
Q Consensus 343 L~~L~~~L~~a~~~L~pGGRLvVISFHS 370 (452)
...+..+|..+..+|+|||++++.+.+.
T Consensus 150 ~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 177 (298)
T 1ri5_A 150 SESLDIAQRNIARHLRPGGYFIMTVPSR 177 (298)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 4567889999999999999999887664
No 385
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=44.18 E-value=9.7 Score=33.60 Aligned_cols=25 Identities=32% Similarity=0.433 Sum_probs=21.5
Q ss_pred HHHHHHHHHHhhcCCCeEEEEeecc
Q 012954 346 LESSLHACFDCLAPGGRLGVISFHS 370 (452)
Q Consensus 346 L~~~L~~a~~~L~pGGRLvVISFHS 370 (452)
+..+|..+..+|+|||++++..+.+
T Consensus 130 ~~~~l~~~~~~L~~gG~l~i~~~~~ 154 (215)
T 2zfu_A 130 IRDFLEEANRVLKPGGLLKVAEVSS 154 (215)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEECGG
T ss_pred HHHHHHHHHHhCCCCeEEEEEEcCC
Confidence 4677888899999999999998765
No 386
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=43.74 E-value=40 Score=32.61 Aligned_cols=23 Identities=13% Similarity=0.132 Sum_probs=19.6
Q ss_pred HHHHHHHHhhcCCCeEEEEeecc
Q 012954 348 SSLHACFDCLAPGGRLGVISFHS 370 (452)
Q Consensus 348 ~~L~~a~~~L~pGGRLvVISFHS 370 (452)
.+|..+..+|+|||++++-.|+.
T Consensus 172 ~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 172 RVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp HHHHHHHHHCCTTCEEEEEESCC
T ss_pred HHHHHHHHHhCCCCEEEEEeCCC
Confidence 47788889999999999877776
No 387
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=43.62 E-value=1.1e+02 Score=28.18 Aligned_cols=78 Identities=14% Similarity=0.124 Sum_probs=52.7
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHH---HHHhhhcccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIK---SVLGQIDENILR 215 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~---~~L~~~~~~l~~ 215 (452)
.|=|.||=-.++.+.+ ..+.+|+.+|++++.++.+.+.+..... ..++..+..+.++.. +++++.
T Consensus 15 VTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~------ 83 (267)
T 3t4x_A 15 VTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYP-----DAILQPVVADLGTEQGCQDVIEKY------ 83 (267)
T ss_dssp ETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCT-----TCEEEEEECCTTSHHHHHHHHHHC------
T ss_pred EeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCC-----CceEEEEecCCCCHHHHHHHHHhc------
Confidence 4878887666666653 2345799999999988877766655322 135667777666543 334333
Q ss_pred cCccEEEEccCCC
Q 012954 216 SGVDAILMDLGMS 228 (452)
Q Consensus 216 ~~VDGILfDLGvS 228 (452)
..+|.++-+=|++
T Consensus 84 g~id~lv~nAg~~ 96 (267)
T 3t4x_A 84 PKVDILINNLGIF 96 (267)
T ss_dssp CCCSEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 3699999999975
No 388
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=43.49 E-value=9.6 Score=38.40 Aligned_cols=41 Identities=27% Similarity=0.325 Sum_probs=30.5
Q ss_pred hhHHHHH-HHHHHHHHhhcCCCeEE--EEeecchhHHHHHHHHH
Q 012954 341 DELKTLE-SSLHACFDCLAPGGRLG--VISFHSLEDRIVKQTFL 381 (452)
Q Consensus 341 ~EL~~L~-~~L~~a~~~L~pGGRLv--VISFHSLEDRIVK~~F~ 381 (452)
.+|..|+ +.|..|..+|+|||+|| .-|+|-.|..-|=+.|.
T Consensus 257 ~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~ENE~vV~~~L 300 (359)
T 4fzv_A 257 QILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQGAI 300 (359)
T ss_dssp HTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchhhCHHHHHHHH
Confidence 3455553 57788999999999998 66789999876555554
No 389
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=43.39 E-value=88 Score=27.86 Aligned_cols=81 Identities=12% Similarity=0.142 Sum_probs=49.4
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHH-hhhccCCCCCCceEEEEccCcchHHH---HHhhhccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHL-NSLLHGQAHPHLKTHTFAKNFRHIKS---VLGQIDENIL 214 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL-~~~~~~~~~~~~r~~li~~nF~~i~~---~L~~~~~~l~ 214 (452)
.|=|.||=-.++.+.+ .....|+++|++++.++...+.+ +..+ .++.++..+..+.++ .+.+... .
T Consensus 7 ItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~~~~--~ 77 (250)
T 2cfc_A 7 VTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYA-------DKVLRVRADVADEGDVNAAIAATME--Q 77 (250)
T ss_dssp EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTG-------GGEEEEECCTTCHHHHHHHHHHHHH--H
T ss_pred EeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-------CcEEEEEecCCCHHHHHHHHHHHHH--H
Confidence 3666666555555543 22346999999998877665555 3322 257777777765443 3332211 0
Q ss_pred ccCccEEEEccCCCc
Q 012954 215 RSGVDAILMDLGMSS 229 (452)
Q Consensus 215 ~~~VDGILfDLGvSS 229 (452)
..++|.++.+-|+..
T Consensus 78 ~~~id~li~~Ag~~~ 92 (250)
T 2cfc_A 78 FGAIDVLVNNAGITG 92 (250)
T ss_dssp HSCCCEEEECCCCCC
T ss_pred hCCCCEEEECCCCCC
Confidence 136999999999754
No 390
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=43.25 E-value=76 Score=29.87 Aligned_cols=80 Identities=15% Similarity=0.135 Sum_probs=51.5
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHH---HHHhhhcccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIK---SVLGQIDENILR 215 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~---~~L~~~~~~l~~ 215 (452)
.|=|.||=-.++.+.+ .....|+.+|++++.++.+.+.+...+. ++.++..+..+.+ +++.+... ..
T Consensus 39 VTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-------~~~~~~~Dv~d~~~v~~~~~~~~~--~~ 109 (291)
T 3cxt_A 39 VTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGI-------NAHGYVCDVTDEDGIQAMVAQIES--EV 109 (291)
T ss_dssp EETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTC-------CCEEEECCTTCHHHHHHHHHHHHH--HT
T ss_pred EeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-------eEEEEEecCCCHHHHHHHHHHHHH--Hc
Confidence 5777777777776663 2334799999999888776666655422 4566666666544 33433211 12
Q ss_pred cCccEEEEccCCC
Q 012954 216 SGVDAILMDLGMS 228 (452)
Q Consensus 216 ~~VDGILfDLGvS 228 (452)
..+|.++-+-|+.
T Consensus 110 g~iD~lvnnAg~~ 122 (291)
T 3cxt_A 110 GIIDILVNNAGII 122 (291)
T ss_dssp CCCCEEEECCCCC
T ss_pred CCCcEEEECCCcC
Confidence 3699999999975
No 391
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=43.05 E-value=93 Score=28.49 Aligned_cols=80 Identities=5% Similarity=-0.034 Sum_probs=51.7
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHH---HHhhhcccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKS---VLGQIDENILR 215 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~---~L~~~~~~l~~ 215 (452)
.|=|.||=-.++.+.+ ....+|+.+|++++.++.+.+.+...+ .++.++..+.++.++ ++.+... ..
T Consensus 16 VTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~Dv~~~~~v~~~~~~~~~--~~ 86 (264)
T 3ucx_A 16 ISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTG-------RRALSVGTDITDDAQVAHLVDETMK--AY 86 (264)
T ss_dssp EESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------CCEEEEECCTTCHHHHHHHHHHHHH--HT
T ss_pred EECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcC-------CcEEEEEcCCCCHHHHHHHHHHHHH--Hc
Confidence 4666666555555553 233579999999999888877776543 267777777766544 3333211 12
Q ss_pred cCccEEEEccCCC
Q 012954 216 SGVDAILMDLGMS 228 (452)
Q Consensus 216 ~~VDGILfDLGvS 228 (452)
..+|.++-+=|+.
T Consensus 87 g~id~lv~nAg~~ 99 (264)
T 3ucx_A 87 GRVDVVINNAFRV 99 (264)
T ss_dssp SCCSEEEECCCSC
T ss_pred CCCcEEEECCCCC
Confidence 3699999888764
No 392
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=42.96 E-value=12 Score=32.92 Aligned_cols=26 Identities=23% Similarity=0.298 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHhhcCCCeEEEEeec
Q 012954 344 KTLESSLHACFDCLAPGGRLGVISFH 369 (452)
Q Consensus 344 ~~L~~~L~~a~~~L~pGGRLvVISFH 369 (452)
+.+..+|..+..+|+|||++++....
T Consensus 118 ~~~~~~l~~~~~~LkpgG~l~~~~~~ 143 (211)
T 3e23_A 118 DELADVLKLIWRALKPGGLFYASYKS 143 (211)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEcC
Confidence 35678899999999999999887553
No 393
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=42.64 E-value=36 Score=33.17 Aligned_cols=45 Identities=9% Similarity=-0.023 Sum_probs=34.2
Q ss_pred CCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHH
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAH 177 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~r 177 (452)
..-.+||.=.|.||=+..+.+.--+...|+++|+|+.|.+.-+.+
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N 59 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR 59 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHH
T ss_pred CCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHh
Confidence 445799999999999999887521211279999999999866543
No 394
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=42.51 E-value=1.1e+02 Score=28.06 Aligned_cols=83 Identities=17% Similarity=0.171 Sum_probs=52.1
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHH---HHhhhcccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKS---VLGQIDENILR 215 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~---~L~~~~~~l~~ 215 (452)
.|=|.||=-.++.+.+ .....|+++|++++.++...+.+...+. ..++.++..+..+.+. ++.+... ..
T Consensus 37 VTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~~--~~ 109 (279)
T 1xg5_A 37 VTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGY-----PGTLIPYRCDLSNEEDILSMFSAIRS--QH 109 (279)
T ss_dssp EESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-----SSEEEEEECCTTCHHHHHHHHHHHHH--HH
T ss_pred EECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCC-----CceEEEEEecCCCHHHHHHHHHHHHH--hC
Confidence 4777777666666553 2234799999999888776666654321 1367777777665544 3332210 01
Q ss_pred cCccEEEEccCCCc
Q 012954 216 SGVDAILMDLGMSS 229 (452)
Q Consensus 216 ~~VDGILfDLGvSS 229 (452)
..+|.++.+-|+..
T Consensus 110 g~iD~vi~~Ag~~~ 123 (279)
T 1xg5_A 110 SGVDICINNAGLAR 123 (279)
T ss_dssp CCCSEEEECCCCCC
T ss_pred CCCCEEEECCCCCC
Confidence 36999999999753
No 395
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=42.39 E-value=11 Score=34.24 Aligned_cols=26 Identities=12% Similarity=0.146 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeecc
Q 012954 345 TLESSLHACFDCLAPGGRLGVISFHS 370 (452)
Q Consensus 345 ~L~~~L~~a~~~L~pGGRLvVISFHS 370 (452)
.+..+|..+.++|+|||++++.+.|.
T Consensus 123 ~~~~~l~~~~~~LkpgG~l~~~~~~~ 148 (253)
T 3g5l_A 123 SFDDICKKVYINLKSSGSFIFSVEHP 148 (253)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred hHHHHHHHHHHHcCCCcEEEEEeCCC
Confidence 45788899999999999999987774
No 396
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=42.33 E-value=12 Score=35.54 Aligned_cols=29 Identities=28% Similarity=0.371 Sum_probs=24.8
Q ss_pred HhhHHHHHHHHHHHHHhhcCCCeEEEEeecc
Q 012954 340 NDELKTLESSLHACFDCLAPGGRLGVISFHS 370 (452)
Q Consensus 340 N~EL~~L~~~L~~a~~~L~pGGRLvVISFHS 370 (452)
.+| .....|..+.+.|+|||+|++..+..
T Consensus 171 ~d~--~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 171 SPD--VVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp CTT--THHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred CcH--HHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 454 57788999999999999999999886
No 397
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=42.30 E-value=15 Score=34.70 Aligned_cols=29 Identities=24% Similarity=0.480 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHhhcCCCeEEEEeecchh
Q 012954 344 KTLESSLHACFDCLAPGGRLGVISFHSLE 372 (452)
Q Consensus 344 ~~L~~~L~~a~~~L~pGGRLvVISFHSLE 372 (452)
..+..+|..+..+|+|||++++.++..-.
T Consensus 171 ~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 199 (318)
T 2fk8_A 171 ENYDDFFKRCFNIMPADGRMTVQSSVSYH 199 (318)
T ss_dssp GGHHHHHHHHHHHSCTTCEEEEEEEECCC
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEeccCC
Confidence 35678889999999999999998876543
No 398
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=42.30 E-value=56 Score=30.21 Aligned_cols=77 Identities=9% Similarity=0.090 Sum_probs=47.8
Q ss_pred hhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcch---HHHHHhhhcccccccCccEE
Q 012954 146 GHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRH---IKSVLGQIDENILRSGVDAI 221 (452)
Q Consensus 146 GHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~---i~~~L~~~~~~l~~~~VDGI 221 (452)
|==.+|.+.+ ..+.+|+..|++++.++.+.+.+++.+. .++..+..+.++ +.+++.+... ....+|++
T Consensus 19 GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~~~~~--~~G~iD~l 90 (256)
T 4fs3_A 19 SIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQ------PEAHLYQIDVQSDEEVINGFEQIGK--DVGNIDGV 90 (256)
T ss_dssp CHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTC------SSCEEEECCTTCHHHHHHHHHHHHH--HHCCCSEE
T ss_pred hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC------CcEEEEEccCCCHHHHHHHHHHHHH--HhCCCCEE
Confidence 3334444432 2345799999999999888888877643 246666655544 4444443211 12479999
Q ss_pred EEccCCCcc
Q 012954 222 LMDLGMSSM 230 (452)
Q Consensus 222 LfDLGvSS~ 230 (452)
+-+-|+...
T Consensus 91 vnnAg~~~~ 99 (256)
T 4fs3_A 91 YHSIAFANM 99 (256)
T ss_dssp EECCCCCCG
T ss_pred Eeccccccc
Confidence 999998643
No 399
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=42.20 E-value=80 Score=29.75 Aligned_cols=80 Identities=25% Similarity=0.282 Sum_probs=54.2
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHH---Hhhhcccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSV---LGQIDENILR 215 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~---L~~~~~~l~~ 215 (452)
.|=|.||=-.++.+.+ ..+.+|+.+|++++.++.+.+.+...+ .++.++..+.++.+++ +++... ..
T Consensus 36 VTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~Dv~d~~~v~~~~~~~~~--~~ 106 (301)
T 3tjr_A 36 VTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQG-------FDAHGVVCDVRHLDEMVRLADEAFR--LL 106 (301)
T ss_dssp EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------CCEEEEECCTTCHHHHHHHHHHHHH--HH
T ss_pred EeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-------CceEEEEccCCCHHHHHHHHHHHHH--hC
Confidence 4777777666666663 233579999999999988877776543 2577777777765443 333211 01
Q ss_pred cCccEEEEccCCC
Q 012954 216 SGVDAILMDLGMS 228 (452)
Q Consensus 216 ~~VDGILfDLGvS 228 (452)
..+|.++-+=|+.
T Consensus 107 g~id~lvnnAg~~ 119 (301)
T 3tjr_A 107 GGVDVVFSNAGIV 119 (301)
T ss_dssp SSCSEEEECCCCC
T ss_pred CCCCEEEECCCcC
Confidence 3699999999986
No 400
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=42.02 E-value=96 Score=28.60 Aligned_cols=84 Identities=8% Similarity=0.009 Sum_probs=52.4
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHH---HHhhhcccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKS---VLGQIDENILR 215 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~---~L~~~~~~l~~ 215 (452)
.|=|.||=-.++.+.+ ....+|+++|++++.++.+.+.+...+.. ..++.++..+..+.++ .+.+... ..
T Consensus 11 VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~--~~ 84 (280)
T 1xkq_A 11 ITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVS----EKQVNSVVADVTTEDGQDQIINSTLK--QF 84 (280)
T ss_dssp ETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCC----GGGEEEEECCTTSHHHHHHHHHHHHH--HH
T ss_pred EECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCC----CcceEEEEecCCCHHHHHHHHHHHHH--hc
Confidence 5777777666666653 23357999999999887776666543210 1156777777765443 3332210 01
Q ss_pred cCccEEEEccCCCc
Q 012954 216 SGVDAILMDLGMSS 229 (452)
Q Consensus 216 ~~VDGILfDLGvSS 229 (452)
..+|.++-+-|+..
T Consensus 85 g~iD~lv~nAg~~~ 98 (280)
T 1xkq_A 85 GKIDVLVNNAGAAI 98 (280)
T ss_dssp SCCCEEEECCCCCC
T ss_pred CCCCEEEECCCCCC
Confidence 36999999999854
No 401
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=41.74 E-value=12 Score=34.67 Aligned_cols=26 Identities=19% Similarity=0.202 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHhhcCCCeEEEEeec
Q 012954 344 KTLESSLHACFDCLAPGGRLGVISFH 369 (452)
Q Consensus 344 ~~L~~~L~~a~~~L~pGGRLvVISFH 369 (452)
+.+..+|..+.++|+|||++++...+
T Consensus 152 ~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 152 SEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp HHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 45678899999999999999877665
No 402
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=41.43 E-value=11 Score=35.86 Aligned_cols=25 Identities=24% Similarity=0.155 Sum_probs=22.2
Q ss_pred HHHHHHHHHHhhcCCCeEEEEeecc
Q 012954 346 LESSLHACFDCLAPGGRLGVISFHS 370 (452)
Q Consensus 346 L~~~L~~a~~~L~pGGRLvVISFHS 370 (452)
+..+|..+..+|+|||+++++++..
T Consensus 200 ~~~~l~~~~~~LkpgG~l~~~~~~~ 224 (312)
T 3vc1_A 200 LHDLFSEHSRFLKVGGRYVTITGCW 224 (312)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCcEEEEEEccc
Confidence 7888999999999999999998654
No 403
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=41.43 E-value=98 Score=28.07 Aligned_cols=80 Identities=15% Similarity=0.135 Sum_probs=50.1
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHH---HHHhhhcccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIK---SVLGQIDENILR 215 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~---~~L~~~~~~l~~ 215 (452)
.|=|.||=-.++.+.+ .....|+.+|++++.++.+.+.+...+ .++..+..+..+.+ ..+.+... ..
T Consensus 19 VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~D~~~~~~~~~~~~~~~~--~~ 89 (260)
T 2zat_A 19 VTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEG-------LSVTGTVCHVGKAEDRERLVAMAVN--LH 89 (260)
T ss_dssp ESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------CCEEEEECCTTCHHHHHHHHHHHHH--HH
T ss_pred EECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CceEEEEccCCCHHHHHHHHHHHHH--Hc
Confidence 4777777666666553 223479999999988877666665432 25666666665443 33333210 01
Q ss_pred cCccEEEEccCCC
Q 012954 216 SGVDAILMDLGMS 228 (452)
Q Consensus 216 ~~VDGILfDLGvS 228 (452)
..+|.++-+-|+.
T Consensus 90 g~iD~lv~~Ag~~ 102 (260)
T 2zat_A 90 GGVDILVSNAAVN 102 (260)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 3699999999975
No 404
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=41.31 E-value=12 Score=33.47 Aligned_cols=27 Identities=11% Similarity=0.030 Sum_probs=22.2
Q ss_pred HHHHHHHHHHhhcCCCeEEEEeecchh
Q 012954 346 LESSLHACFDCLAPGGRLGVISFHSLE 372 (452)
Q Consensus 346 L~~~L~~a~~~L~pGGRLvVISFHSLE 372 (452)
...+|..+..+|+|||++++.+++...
T Consensus 132 ~~~~l~~~~~~L~pgG~l~i~~~~~~~ 158 (242)
T 3l8d_A 132 PLRALNEIKRVLKSDGYACIAILGPTA 158 (242)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEECTTC
T ss_pred HHHHHHHHHHHhCCCeEEEEEEcCCcc
Confidence 346788889999999999999876543
No 405
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=41.24 E-value=91 Score=24.50 Aligned_cols=55 Identities=20% Similarity=0.032 Sum_probs=38.0
Q ss_pred CEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhcccccccCccEEEEccCC
Q 012954 159 KLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGM 227 (452)
Q Consensus 159 g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~l~~~~VDGILfDLGv 227 (452)
-+|+-+|-|+...+.-+..|+..+. .+.....+.......+.+ ..+|.||+|+..
T Consensus 10 ~~iLivdd~~~~~~~l~~~L~~~g~-------~v~~~~~~~~~a~~~~~~-------~~~dlii~d~~~ 64 (140)
T 3cg0_A 10 PGVLIVEDGRLAAATLRIQLESLGY-------DVLGVFDNGEEAVRCAPD-------LRPDIALVDIML 64 (140)
T ss_dssp CEEEEECCBHHHHHHHHHHHHHHTC-------EEEEEESSHHHHHHHHHH-------HCCSEEEEESSC
T ss_pred ceEEEEECCHHHHHHHHHHHHHCCC-------eeEEEECCHHHHHHHHHh-------CCCCEEEEecCC
Confidence 4688999999999888888877532 343234555555455443 359999999875
No 406
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=41.16 E-value=11 Score=35.47 Aligned_cols=25 Identities=12% Similarity=0.336 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeec
Q 012954 345 TLESSLHACFDCLAPGGRLGVISFH 369 (452)
Q Consensus 345 ~L~~~L~~a~~~L~pGGRLvVISFH 369 (452)
.+..+|..+..+|+|||+|++++|.
T Consensus 127 ~~~~~l~~~~~~LkpgG~l~i~~~~ 151 (299)
T 3g5t_A 127 DFEKFQRSAYANLRKDGTIAIWGYA 151 (299)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CHHHHHHHHHHhcCCCcEEEEEecC
Confidence 3568888999999999999997765
No 407
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=40.97 E-value=1.2e+02 Score=27.85 Aligned_cols=83 Identities=14% Similarity=0.106 Sum_probs=53.9
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHH---Hhhhcccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSV---LGQIDENILR 215 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~---L~~~~~~l~~ 215 (452)
.|=|.||=-.++.+.+ ....+|+.+|++++.++.+.+.++..+.. ..++.++..+.++.+++ +++... ..
T Consensus 16 VTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~--~~ 89 (281)
T 3svt_A 16 VTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGAN----GGAIRYEPTDITNEDETARAVDAVTA--WH 89 (281)
T ss_dssp EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCS----SCEEEEEECCTTSHHHHHHHHHHHHH--HH
T ss_pred EeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCC----CceEEEEeCCCCCHHHHHHHHHHHHH--Hc
Confidence 4777777666666553 23357999999999988887777654321 12677888777665443 333211 01
Q ss_pred cCccEEEEccCCC
Q 012954 216 SGVDAILMDLGMS 228 (452)
Q Consensus 216 ~~VDGILfDLGvS 228 (452)
..+|.++-+=|++
T Consensus 90 g~id~lv~nAg~~ 102 (281)
T 3svt_A 90 GRLHGVVHCAGGS 102 (281)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCcC
Confidence 3699999999864
No 408
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=40.91 E-value=13 Score=33.61 Aligned_cols=25 Identities=24% Similarity=0.344 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeec
Q 012954 345 TLESSLHACFDCLAPGGRLGVISFH 369 (452)
Q Consensus 345 ~L~~~L~~a~~~L~pGGRLvVISFH 369 (452)
.+..+|..+..+|+|||++++..+.
T Consensus 163 ~~~~~l~~~~~~LkpgG~l~i~~~~ 187 (241)
T 2ex4_A 163 HLAEFLRRCKGSLRPNGIIVIKDNM 187 (241)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHhcCCCeEEEEEEcc
Confidence 3578899999999999999998764
No 409
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=40.71 E-value=1.1e+02 Score=28.14 Aligned_cols=81 Identities=19% Similarity=0.154 Sum_probs=52.1
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCC------------HHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHH-
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVD------------PSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSV- 205 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD------------~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~- 205 (452)
.|=|.||=-.++.+.+ ....+|+.+|++ ++.++.+.+.+...+. ++.++..+.++.+++
T Consensus 18 VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~D~~~~~~v~ 90 (278)
T 3sx2_A 18 ITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGS-------RIVARQADVRDRESLS 90 (278)
T ss_dssp EESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTC-------CEEEEECCTTCHHHHH
T ss_pred EECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCC-------eEEEEeCCCCCHHHHH
Confidence 4777777555655553 234579999987 7777777666665532 677788777665443
Q ss_pred --HhhhcccccccCccEEEEccCCCc
Q 012954 206 --LGQIDENILRSGVDAILMDLGMSS 229 (452)
Q Consensus 206 --L~~~~~~l~~~~VDGILfDLGvSS 229 (452)
+.+... ....+|.++-+=|+..
T Consensus 91 ~~~~~~~~--~~g~id~lv~nAg~~~ 114 (278)
T 3sx2_A 91 AALQAGLD--ELGRLDIVVANAGIAP 114 (278)
T ss_dssp HHHHHHHH--HHCCCCEEEECCCCCC
T ss_pred HHHHHHHH--HcCCCCEEEECCCCCC
Confidence 333211 0136999999999864
No 410
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=40.47 E-value=1e+02 Score=24.01 Aligned_cols=55 Identities=16% Similarity=0.062 Sum_probs=38.0
Q ss_pred EEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhcccccccCccEEEEccCCC
Q 012954 160 LHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMS 228 (452)
Q Consensus 160 ~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~l~~~~VDGILfDLGvS 228 (452)
+|+-+|-|+...+.-+..|+..+. .+.....+..+....+.+ ..+|.||+|+.+.
T Consensus 3 ~ilivdd~~~~~~~l~~~L~~~g~-------~v~~~~~~~~~a~~~~~~-------~~~dlii~d~~l~ 57 (134)
T 3f6c_A 3 NAIIIDDHPLAIAAIRNLLIKNDI-------EILAELTEGGSAVQRVET-------LKPDIVIIDVDIP 57 (134)
T ss_dssp EEEEECCCHHHHHHHHHHHHHTTE-------EEEEEESSSTTHHHHHHH-------HCCSEEEEETTCS
T ss_pred EEEEEcCCHHHHHHHHHHHhhCCc-------EEEEEcCCHHHHHHHHHh-------cCCCEEEEecCCC
Confidence 478899999988888888876532 333234566666555553 3699999999764
No 411
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=40.41 E-value=83 Score=29.79 Aligned_cols=80 Identities=20% Similarity=0.171 Sum_probs=56.2
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcch---HHHHHhhhcccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRH---IKSVLGQIDENILR 215 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~---i~~~L~~~~~~l~~ 215 (452)
.|=|.+|==.+|.+.+ ..+.+|+..|++++.++.+.+.+...+. ++..+..+.++ +.+++++... ..
T Consensus 14 VTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~-------~~~~~~~Dv~~~~~v~~~~~~~~~--~~ 84 (255)
T 4g81_D 14 VTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGY-------DAHGVAFDVTDELAIEAAFSKLDA--EG 84 (255)
T ss_dssp ETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTC-------CEEECCCCTTCHHHHHHHHHHHHH--TT
T ss_pred EeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-------cEEEEEeeCCCHHHHHHHHHHHHH--HC
Confidence 4888888888888774 4456899999999999888877776532 56667666554 4444444321 12
Q ss_pred cCccEEEEccCCC
Q 012954 216 SGVDAILMDLGMS 228 (452)
Q Consensus 216 ~~VDGILfDLGvS 228 (452)
.++|.++-+=|++
T Consensus 85 G~iDiLVNNAG~~ 97 (255)
T 4g81_D 85 IHVDILINNAGIQ 97 (255)
T ss_dssp CCCCEEEECCCCC
T ss_pred CCCcEEEECCCCC
Confidence 4799999998874
No 412
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=40.14 E-value=1e+02 Score=23.58 Aligned_cols=55 Identities=16% Similarity=0.005 Sum_probs=35.4
Q ss_pred EEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhcccccccCccEEEEccCCC
Q 012954 160 LHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMS 228 (452)
Q Consensus 160 ~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~l~~~~VDGILfDLGvS 228 (452)
+++-+|-|+.....-+..|+..+. .+.....+-...-..+.. ..+|.|++|+.++
T Consensus 4 ~ilivdd~~~~~~~l~~~l~~~g~-------~vv~~~~~~~~a~~~~~~-------~~~dlil~D~~l~ 58 (120)
T 1tmy_A 4 RVLIVDDAAFMRMMLKDIITKAGY-------EVAGEATNGREAVEKYKE-------LKPDIVTMDITMP 58 (120)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC-------EEEEEESSHHHHHHHHHH-------HCCSEEEEECSCG
T ss_pred eEEEEcCcHHHHHHHHHHHhhcCc-------EEEEEECCHHHHHHHHHh-------cCCCEEEEeCCCC
Confidence 578899999988888877775432 322223444444344432 3589999999774
No 413
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=40.05 E-value=1e+02 Score=27.95 Aligned_cols=80 Identities=14% Similarity=0.081 Sum_probs=49.2
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHH---HHHhhhcccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIK---SVLGQIDENILR 215 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~---~~L~~~~~~l~~ 215 (452)
.|=|.||=-.++.+.+ ....+|+.+|++++.++...+.+...+ .++.++..+..+-+ +++.+... ..
T Consensus 7 VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~v~~~~~~~~~--~~ 77 (256)
T 1geg_A 7 VTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAG-------GHAVAVKVDVSDRDQVFAAVEQARK--TL 77 (256)
T ss_dssp EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-------CCEEEEECCTTSHHHHHHHHHHHHH--HT
T ss_pred EECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-------CcEEEEEecCCCHHHHHHHHHHHHH--Hh
Confidence 3666666555555542 223479999999988877666665432 25666776666544 33433211 01
Q ss_pred cCccEEEEccCCC
Q 012954 216 SGVDAILMDLGMS 228 (452)
Q Consensus 216 ~~VDGILfDLGvS 228 (452)
..+|.++-+-|+.
T Consensus 78 g~id~lv~nAg~~ 90 (256)
T 1geg_A 78 GGFDVIVNNAGVA 90 (256)
T ss_dssp TCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 3699999999975
No 414
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=40.04 E-value=49 Score=32.50 Aligned_cols=43 Identities=16% Similarity=0.090 Sum_probs=36.0
Q ss_pred CCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHH
Q 012954 134 ITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHL 178 (452)
Q Consensus 134 ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL 178 (452)
+-.++|.=.|.||=+..+.+. + -..++++|+|+.|++..+.+.
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a-G-~~~v~~~e~d~~a~~t~~~N~ 53 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC-G-AECVYSNEWDKYAQEVYEMNF 53 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT-T-CEEEEEECCCHHHHHHHHHHH
T ss_pred CCcEEEECCCcCHHHHHHHHC-C-CeEEEEEeCCHHHHHHHHHHc
Confidence 358999999999999999875 3 346999999999998877654
No 415
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=39.96 E-value=13 Score=33.32 Aligned_cols=25 Identities=16% Similarity=0.258 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHhhcCCCeEEEEee
Q 012954 344 KTLESSLHACFDCLAPGGRLGVISF 368 (452)
Q Consensus 344 ~~L~~~L~~a~~~L~pGGRLvVISF 368 (452)
+.+..+|..+.++|+|||++++...
T Consensus 174 ~~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 174 ADFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCeEEEEEec
Confidence 3577889999999999999999885
No 416
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=39.89 E-value=56 Score=30.52 Aligned_cols=87 Identities=14% Similarity=0.084 Sum_probs=55.2
Q ss_pred CCCEEEEEccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHH---HHHhh
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIK---SVLGQ 208 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~---~~L~~ 208 (452)
.+.+++ .|=|.||=-.++.+.+ ....+|+.+|++++.++...+.+...+. ++.++..+.++.+ +++++
T Consensus 31 ~gk~~l-VTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-------~~~~~~~Dl~d~~~v~~~~~~ 102 (276)
T 3r1i_A 31 SGKRAL-ITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGG-------KALPIRCDVTQPDQVRGMLDQ 102 (276)
T ss_dssp TTCEEE-EESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTC-------CCEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEE-EeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-------eEEEEEcCCCCHHHHHHHHHH
Confidence 344433 5777777666666553 2345799999999988877777765432 5666776666544 44443
Q ss_pred hcccccccCccEEEEccCCCc
Q 012954 209 IDENILRSGVDAILMDLGMSS 229 (452)
Q Consensus 209 ~~~~l~~~~VDGILfDLGvSS 229 (452)
... ....+|.++-+=|++.
T Consensus 103 ~~~--~~g~iD~lvnnAg~~~ 121 (276)
T 3r1i_A 103 MTG--ELGGIDIAVCNAGIVS 121 (276)
T ss_dssp HHH--HHSCCSEEEECCCCCC
T ss_pred HHH--HcCCCCEEEECCCCCC
Confidence 211 1237999999999854
No 417
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=39.85 E-value=12 Score=32.80 Aligned_cols=26 Identities=15% Similarity=0.061 Sum_probs=21.8
Q ss_pred HHHHHHHHHHhhcCCCeEEEEeecch
Q 012954 346 LESSLHACFDCLAPGGRLGVISFHSL 371 (452)
Q Consensus 346 L~~~L~~a~~~L~pGGRLvVISFHSL 371 (452)
...+|..+..+|+|||++++..+...
T Consensus 122 ~~~~l~~~~~~LkpgG~l~i~~~~~~ 147 (219)
T 3dh0_A 122 PLKFLEELKRVAKPFAYLAIIDWKKE 147 (219)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred HHHHHHHHHHHhCCCeEEEEEEeccc
Confidence 46788889999999999999986543
No 418
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=39.83 E-value=49 Score=32.59 Aligned_cols=44 Identities=16% Similarity=0.198 Sum_probs=34.6
Q ss_pred CEEEEEccCCChhHHHHHHhCCCCCEE-EEEeCCHHHHHHHHHHH
Q 012954 135 TSFVDCTLGAAGHSSAIIRAHPELKLH-IGVDVDPSALAKARAHL 178 (452)
Q Consensus 135 giyVDaTlG~GGHS~aIL~~~p~~g~V-igfDrD~~Ai~~Ak~rL 178 (452)
-.+||.=.|.||=+..+-+.--+...+ +|+|+|+.|.+.-+.+.
T Consensus 11 ~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~ 55 (327)
T 3qv2_A 11 VNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNF 55 (327)
T ss_dssp EEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHH
T ss_pred CEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHC
Confidence 379999999999999988652112457 89999999998776653
No 419
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=39.83 E-value=35 Score=30.18 Aligned_cols=24 Identities=13% Similarity=0.116 Sum_probs=20.7
Q ss_pred HHHHHHHHHHhhcCCCeEEEEeec
Q 012954 346 LESSLHACFDCLAPGGRLGVISFH 369 (452)
Q Consensus 346 L~~~L~~a~~~L~pGGRLvVISFH 369 (452)
...+|..+..+|+|||++++.|-+
T Consensus 135 ~~~~l~~~~~~LkpgG~l~~~~~~ 158 (214)
T 1yzh_A 135 YKTFLDTFKRILPENGEIHFKTDN 158 (214)
T ss_dssp SHHHHHHHHHHSCTTCEEEEEESC
T ss_pred CHHHHHHHHHHcCCCcEEEEEeCC
Confidence 567888999999999999998744
No 420
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=39.81 E-value=9.9 Score=33.77 Aligned_cols=27 Identities=22% Similarity=0.363 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHhhcCCCeEEEEeecc
Q 012954 344 KTLESSLHACFDCLAPGGRLGVISFHS 370 (452)
Q Consensus 344 ~~L~~~L~~a~~~L~pGGRLvVISFHS 370 (452)
+.+..+|..+.++|+|||++++..++.
T Consensus 118 ~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 118 EELGAAVASFAEHLEPGGVVVVEPWWF 144 (239)
T ss_dssp HHHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred HHHHHHHHHHHHhcCCCeEEEEEeccC
Confidence 567889999999999999998876554
No 421
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=39.57 E-value=1.2e+02 Score=26.91 Aligned_cols=80 Identities=18% Similarity=0.182 Sum_probs=50.2
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhh-hccCCCCCCceEEEEccCcchHHH---HHhhhccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNS-LLHGQAHPHLKTHTFAKNFRHIKS---VLGQIDENIL 214 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~-~~~~~~~~~~r~~li~~nF~~i~~---~L~~~~~~l~ 214 (452)
.|=|.||=-.++.+.+ ....+|+++|++++.++...+.+.. .+ .++.++..+..+.+. .+.+... .
T Consensus 12 VtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~~~~--~ 82 (248)
T 2pnf_A 12 VTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYG-------VKAHGVEMNLLSEESINKAFEEIYN--L 82 (248)
T ss_dssp ETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHC-------CCEEEEECCTTCHHHHHHHHHHHHH--H
T ss_pred EECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcC-------CceEEEEccCCCHHHHHHHHHHHHH--h
Confidence 4777777666666653 2334799999999888766655543 22 256677766665443 3333211 0
Q ss_pred ccCccEEEEccCCC
Q 012954 215 RSGVDAILMDLGMS 228 (452)
Q Consensus 215 ~~~VDGILfDLGvS 228 (452)
...+|+++-.-|+.
T Consensus 83 ~~~~d~vi~~Ag~~ 96 (248)
T 2pnf_A 83 VDGIDILVNNAGIT 96 (248)
T ss_dssp SSCCSEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 13699999988875
No 422
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=39.53 E-value=22 Score=33.94 Aligned_cols=26 Identities=23% Similarity=0.345 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeecc
Q 012954 345 TLESSLHACFDCLAPGGRLGVISFHS 370 (452)
Q Consensus 345 ~L~~~L~~a~~~L~pGGRLvVISFHS 370 (452)
...+.|..+.+.|+|||+|+|+.+.-
T Consensus 252 ~~~~~l~~~~~~L~pgG~l~i~e~~~ 277 (332)
T 3i53_A 252 SAVAILRRCAEAAGSGGVVLVIEAVA 277 (332)
T ss_dssp HHHHHHHHHHHHHTTTCEEEEEECCC
T ss_pred HHHHHHHHHHHhcCCCCEEEEEeecC
Confidence 46778889999999999999987643
No 423
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=39.45 E-value=21 Score=34.63 Aligned_cols=27 Identities=22% Similarity=0.378 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHhhcCCCeEEEEeecc
Q 012954 344 KTLESSLHACFDCLAPGGRLGVISFHS 370 (452)
Q Consensus 344 ~~L~~~L~~a~~~L~pGGRLvVISFHS 370 (452)
+.....|..+.++|+|||+|+|+.+..
T Consensus 272 ~~~~~~l~~~~~~L~pgG~l~i~e~~~ 298 (359)
T 1x19_A 272 QLSTIMCKKAFDAMRSGGRLLILDMVI 298 (359)
T ss_dssp HHHHHHHHHHHTTCCTTCEEEEEEECC
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 457888999999999999999998754
No 424
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=39.37 E-value=1.1e+02 Score=27.85 Aligned_cols=80 Identities=18% Similarity=0.140 Sum_probs=50.4
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhh-ccCCCCCCceEEEEccCcchHH---HHHhhhccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSL-LHGQAHPHLKTHTFAKNFRHIK---SVLGQIDENIL 214 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~-~~~~~~~~~r~~li~~nF~~i~---~~L~~~~~~l~ 214 (452)
.|=|.||=-.++.+.+ ....+|+++|++++.++.+.+.+... + .++.++..+..+.+ +.+.+... .
T Consensus 12 VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-------~~~~~~~~D~~~~~~~~~~~~~~~~--~ 82 (263)
T 3ai3_A 12 ITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFG-------VRVLEVAVDVATPEGVDAVVESVRS--S 82 (263)
T ss_dssp EESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC-------CCEEEEECCTTSHHHHHHHHHHHHH--H
T ss_pred EECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcC-------CceEEEEcCCCCHHHHHHHHHHHHH--H
Confidence 5777777666666653 22347999999998887766655432 2 15667776666544 33333211 0
Q ss_pred ccCccEEEEccCCC
Q 012954 215 RSGVDAILMDLGMS 228 (452)
Q Consensus 215 ~~~VDGILfDLGvS 228 (452)
..++|.++-+-|+.
T Consensus 83 ~g~id~lv~~Ag~~ 96 (263)
T 3ai3_A 83 FGGADILVNNAGTG 96 (263)
T ss_dssp HSSCSEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 13699999999875
No 425
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=39.33 E-value=51 Score=36.60 Aligned_cols=81 Identities=10% Similarity=0.058 Sum_probs=54.8
Q ss_pred CCEEEEEccCCChhHHHHHHhCC------------CCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcch
Q 012954 134 ITSFVDCTLGAAGHSSAIIRAHP------------ELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRH 201 (452)
Q Consensus 134 ggiyVDaTlG~GGHS~aIL~~~p------------~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~ 201 (452)
+.+++|.=.|.|-=+.+.+.... ...+|||+|..+.|+...+.+..+ +. .++++++++.-++
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~N-g~-----~d~VtVI~gd~ee 483 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVR-TW-----KRRVTIIESDMRS 483 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHH-TT-----TTCSEEEESCGGG
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhc-CC-----CCeEEEEeCchhh
Confidence 35899999999987766555432 223899999999999776665542 22 2479999999998
Q ss_pred HHHHHhhhcccccccCccEEEEc
Q 012954 202 IKSVLGQIDENILRSGVDAILMD 224 (452)
Q Consensus 202 i~~~L~~~~~~l~~~~VDGILfD 224 (452)
+.--+...+ ..+||-|+=-
T Consensus 484 v~lp~~~~~----~ekVDIIVSE 502 (745)
T 3ua3_A 484 LPGIAKDRG----FEQPDIIVSE 502 (745)
T ss_dssp HHHHHHHTT----CCCCSEEEEC
T ss_pred cccccccCC----CCcccEEEEe
Confidence 853221111 2468877654
No 426
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=39.12 E-value=1.2e+02 Score=28.03 Aligned_cols=81 Identities=15% Similarity=0.160 Sum_probs=50.2
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHH-hhhccCCCCCCceEEEEccCcchHH---HHHhhhccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHL-NSLLHGQAHPHLKTHTFAKNFRHIK---SVLGQIDENIL 214 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL-~~~~~~~~~~~~r~~li~~nF~~i~---~~L~~~~~~l~ 214 (452)
.|=|.||=-.++.+.+ ..+..|+++|++++.++.+.+.+ +..+ .++.++..+..+.+ .++.+... .
T Consensus 26 VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-------~~~~~~~~Dl~~~~~v~~~~~~~~~--~ 96 (267)
T 1vl8_A 26 VTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG-------VETMAFRCDVSNYEEVKKLLEAVKE--K 96 (267)
T ss_dssp EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC-------CCEEEEECCTTCHHHHHHHHHHHHH--H
T ss_pred EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-------CeEEEEEcCCCCHHHHHHHHHHHHH--H
Confidence 5777777666666553 22347999999998887666555 3332 15666766666543 33333211 0
Q ss_pred ccCccEEEEccCCCc
Q 012954 215 RSGVDAILMDLGMSS 229 (452)
Q Consensus 215 ~~~VDGILfDLGvSS 229 (452)
...+|+++-+-|+..
T Consensus 97 ~g~iD~lvnnAg~~~ 111 (267)
T 1vl8_A 97 FGKLDTVVNAAGINR 111 (267)
T ss_dssp HSCCCEEEECCCCCC
T ss_pred cCCCCEEEECCCcCC
Confidence 136999999999753
No 427
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=39.10 E-value=1.1e+02 Score=28.65 Aligned_cols=81 Identities=19% Similarity=0.165 Sum_probs=52.6
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCC------------HHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHH-
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVD------------PSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSV- 205 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD------------~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~- 205 (452)
.|=|.||=-.++.+.+ ..+.+|+.+|++ ++.++.+.+.++..+ .++.++..+.++.+++
T Consensus 33 VTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~Dv~~~~~v~ 105 (299)
T 3t7c_A 33 ITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG-------RRIIASQVDVRDFDAMQ 105 (299)
T ss_dssp EESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTT-------CCEEEEECCTTCHHHHH
T ss_pred EECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcC-------CceEEEECCCCCHHHHH
Confidence 4777777666666653 234579999987 777777766666543 2677777777665443
Q ss_pred --HhhhcccccccCccEEEEccCCCc
Q 012954 206 --LGQIDENILRSGVDAILMDLGMSS 229 (452)
Q Consensus 206 --L~~~~~~l~~~~VDGILfDLGvSS 229 (452)
+++... ....+|.++-+=|+..
T Consensus 106 ~~~~~~~~--~~g~iD~lv~nAg~~~ 129 (299)
T 3t7c_A 106 AAVDDGVT--QLGRLDIVLANAALAS 129 (299)
T ss_dssp HHHHHHHH--HHSCCCEEEECCCCCC
T ss_pred HHHHHHHH--HhCCCCEEEECCCCCC
Confidence 333211 1236999999999853
No 428
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=39.09 E-value=41 Score=33.19 Aligned_cols=42 Identities=14% Similarity=0.161 Sum_probs=33.8
Q ss_pred EEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHH
Q 012954 136 SFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAH 177 (452)
Q Consensus 136 iyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~r 177 (452)
.++|.=.|.||=+..+.+.--+...|+|+|+|+.|.+.-+.+
T Consensus 5 ~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N 46 (333)
T 4h0n_A 5 KILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHN 46 (333)
T ss_dssp EEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHH
T ss_pred EEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHh
Confidence 589999999999999987622224589999999999876654
No 429
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=39.02 E-value=77 Score=29.66 Aligned_cols=80 Identities=14% Similarity=0.026 Sum_probs=53.0
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHH---HHhhhcccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKS---VLGQIDENILR 215 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~---~L~~~~~~l~~ 215 (452)
.|=|+||=-.++.+.+ ..+.+|+.+|++++.++.+.+.+...+ .++.++..+.++.+. ++.+... ..
T Consensus 13 VTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~Dv~~~~~v~~~~~~~~~--~~ 83 (280)
T 3tox_A 13 VTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGG-------GEAAALAGDVGDEALHEALVELAVR--RF 83 (280)
T ss_dssp ESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTT-------CCEEECCCCTTCHHHHHHHHHHHHH--HH
T ss_pred EECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-------CcEEEEECCCCCHHHHHHHHHHHHH--Hc
Confidence 4777777666666653 234579999999999888777665432 267777777665443 3333211 01
Q ss_pred cCccEEEEccCCC
Q 012954 216 SGVDAILMDLGMS 228 (452)
Q Consensus 216 ~~VDGILfDLGvS 228 (452)
..+|.++-+=|+.
T Consensus 84 g~iD~lvnnAg~~ 96 (280)
T 3tox_A 84 GGLDTAFNNAGAL 96 (280)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 3699999999975
No 430
>2i5h_A Hypothetical protein AF1531; PFAM:DUF655, PSI-2, structural genomics, protein structure initiative; 1.74A {Archaeoglobus fulgidus} SCOP: e.71.1.1
Probab=38.87 E-value=22 Score=33.53 Aligned_cols=26 Identities=12% Similarity=0.217 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHhhCCCCcHHHHHHHH
Q 012954 285 HLLQNKIVQARLRGGLHSTGELVDLI 310 (452)
Q Consensus 285 ~rIA~aIv~~R~~~~i~TT~eLa~iI 310 (452)
.+.|++||++|+.+++++..||.+-|
T Consensus 142 ~k~A~~IIeyRe~G~F~s~eDL~~RV 167 (205)
T 2i5h_A 142 KKMMWAIIEERKKRPFESFEDIAQRV 167 (205)
T ss_dssp HHHHHHHHHHHHHSCCCSHHHHHHHS
T ss_pred HHHHHHHHHHHhcCCCCCHHHHHHhc
Confidence 56899999999999999999997744
No 431
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=38.69 E-value=18 Score=36.87 Aligned_cols=43 Identities=12% Similarity=0.190 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHhhcCCCeEEEEeecchhH--H-----HHHHHHHhhhcc
Q 012954 344 KTLESSLHACFDCLAPGGRLGVISFHSLED--R-----IVKQTFLSIIDH 386 (452)
Q Consensus 344 ~~L~~~L~~a~~~L~pGGRLvVISFHSLED--R-----IVK~~F~~~~~~ 386 (452)
.-+..+|..-.+.|+||||+++...=--.+ - ++...++++...
T Consensus 202 ~D~~~FL~~Ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~e 251 (384)
T 2efj_A 202 KDFTTFLRIHSEELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIE 251 (384)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHh
Confidence 458888999999999999999877632222 1 888888776543
No 432
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=38.52 E-value=1.5e+02 Score=27.41 Aligned_cols=81 Identities=11% Similarity=0.001 Sum_probs=52.3
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHH---HHhhhcccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKS---VLGQIDENILR 215 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~---~L~~~~~~l~~ 215 (452)
.|=|.||=-.++.+.+ ....+|+.+|++.+.++.+.+.+..... .++.++..+..+..+ ++.+... ..
T Consensus 32 VTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~------~~~~~~~~Dv~~~~~v~~~~~~~~~--~~ 103 (277)
T 4fc7_A 32 ITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATG------RRCLPLSMDVRAPPAVMAAVDQALK--EF 103 (277)
T ss_dssp EETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHS------SCEEEEECCTTCHHHHHHHHHHHHH--HH
T ss_pred EeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC------CcEEEEEcCCCCHHHHHHHHHHHHH--Hc
Confidence 5778887777777663 3345799999999888776665543211 267777777765443 3333211 12
Q ss_pred cCccEEEEccCCC
Q 012954 216 SGVDAILMDLGMS 228 (452)
Q Consensus 216 ~~VDGILfDLGvS 228 (452)
..+|+++-+=|+.
T Consensus 104 g~id~lv~nAg~~ 116 (277)
T 4fc7_A 104 GRIDILINCAAGN 116 (277)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCcCC
Confidence 3799999998864
No 433
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=38.50 E-value=1.2e+02 Score=28.09 Aligned_cols=81 Identities=20% Similarity=0.162 Sum_probs=51.9
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCC----------------HHHHHHHHHHHhhhccCCCCCCceEEEEccCcchH
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVD----------------PSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHI 202 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD----------------~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i 202 (452)
.|=|.||=-.++.+.+ ..+.+|+.+|++ ++.++...+.+...+ .++.++..+.++.
T Consensus 16 VTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~Dv~~~ 88 (286)
T 3uve_A 16 VTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHN-------RRIVTAEVDVRDY 88 (286)
T ss_dssp EESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTT-------CCEEEEECCTTCH
T ss_pred EeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcC-------CceEEEEcCCCCH
Confidence 5777777666666653 234579999997 777777666665542 2677777776654
Q ss_pred H---HHHhhhcccccccCccEEEEccCCCc
Q 012954 203 K---SVLGQIDENILRSGVDAILMDLGMSS 229 (452)
Q Consensus 203 ~---~~L~~~~~~l~~~~VDGILfDLGvSS 229 (452)
+ +++.+... ....+|.++-+=|+..
T Consensus 89 ~~v~~~~~~~~~--~~g~id~lv~nAg~~~ 116 (286)
T 3uve_A 89 DALKAAVDSGVE--QLGRLDIIVANAGIGN 116 (286)
T ss_dssp HHHHHHHHHHHH--HHSCCCEEEECCCCCC
T ss_pred HHHHHHHHHHHH--HhCCCCEEEECCcccC
Confidence 4 33433211 0136999999999754
No 434
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=38.17 E-value=1.2e+02 Score=27.65 Aligned_cols=83 Identities=17% Similarity=0.112 Sum_probs=51.5
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHH---HHhhhcccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKS---VLGQIDENILR 215 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~---~L~~~~~~l~~ 215 (452)
.|=|.||=-.++.+.+ ....+|+.+|++++.++.+.+.+..... ..++.++..+..+.++ ++++... ..
T Consensus 18 VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~--~~ 90 (267)
T 1iy8_A 18 ITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAP-----DAEVLTTVADVSDEAQVEAYVTATTE--RF 90 (267)
T ss_dssp EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCT-----TCCEEEEECCTTSHHHHHHHHHHHHH--HH
T ss_pred EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC-----CceEEEEEccCCCHHHHHHHHHHHHH--Hc
Confidence 5777777666666553 2334799999999888776665644311 1256777777665443 3333211 01
Q ss_pred cCccEEEEccCCCc
Q 012954 216 SGVDAILMDLGMSS 229 (452)
Q Consensus 216 ~~VDGILfDLGvSS 229 (452)
..+|.++-+-|+..
T Consensus 91 g~id~lv~nAg~~~ 104 (267)
T 1iy8_A 91 GRIDGFFNNAGIEG 104 (267)
T ss_dssp SCCSEEEECCCCCC
T ss_pred CCCCEEEECCCcCC
Confidence 36999999999753
No 435
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=37.93 E-value=27 Score=30.22 Aligned_cols=25 Identities=16% Similarity=-0.049 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHH--hhcCCCeEEEEee
Q 012954 344 KTLESSLHACFD--CLAPGGRLGVISF 368 (452)
Q Consensus 344 ~~L~~~L~~a~~--~L~pGGRLvVISF 368 (452)
+.++..|..+.+ +|+|||++++-+.
T Consensus 128 ~~~~~~l~~~~~~~~L~pgG~l~~~~~ 154 (189)
T 3p9n_A 128 ADVDAILAALGTNGWTREGTVAVVERA 154 (189)
T ss_dssp HHHHHHHHHHHHSSSCCTTCEEEEEEE
T ss_pred hhHHHHHHHHHhcCccCCCeEEEEEec
Confidence 567777888888 9999999988554
No 436
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=37.80 E-value=11 Score=32.37 Aligned_cols=60 Identities=13% Similarity=0.016 Sum_probs=39.6
Q ss_pred CCCCEEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhcc
Q 012954 132 RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDE 211 (452)
Q Consensus 132 ~~ggiyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~ 211 (452)
.+|..++|.+.|. +++|..+.+++.|++++.. ++++++.+..++. ....
T Consensus 11 ~~g~~vL~~~~g~-----------------v~vD~s~~ml~~a~~~~~~----------~~~~~~~d~~~~~--~~~~-- 59 (176)
T 2ld4_A 11 SAGQFVAVVWDKS-----------------SPVEALKGLVDKLQALTGN----------EGRVSVENIKQLL--QSAH-- 59 (176)
T ss_dssp CTTSEEEEEECTT-----------------SCHHHHHHHHHHHHHHTTT----------TSEEEEEEGGGGG--GGCC--
T ss_pred CCCCEEEEecCCc-----------------eeeeCCHHHHHHHHHhccc----------CcEEEEechhcCc--cccC--
Confidence 5788999987664 2389999999999887532 2556677766542 1000
Q ss_pred cccccCccEEEEc
Q 012954 212 NILRSGVDAILMD 224 (452)
Q Consensus 212 ~l~~~~VDGILfD 224 (452)
....+|.|+..
T Consensus 60 --~~~~fD~V~~~ 70 (176)
T 2ld4_A 60 --KESSFDIILSG 70 (176)
T ss_dssp --CSSCEEEEEEC
T ss_pred --CCCCEeEEEEC
Confidence 12468988864
No 437
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=37.77 E-value=1.3e+02 Score=26.76 Aligned_cols=81 Identities=16% Similarity=0.165 Sum_probs=50.7
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCc-----chHHHHHhhhcccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNF-----RHIKSVLGQIDENI 213 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF-----~~i~~~L~~~~~~l 213 (452)
.|=|.||=-.+|.+.+ ....+|+.+|++++.++...+.+...+. .++.++..+. ..+.+++++...
T Consensus 19 ITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~------~~~~~~~~d~d~~~~~~~~~~~~~~~~-- 90 (247)
T 3i1j_A 19 VTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQ------PQPLIIALNLENATAQQYRELAARVEH-- 90 (247)
T ss_dssp ESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTS------CCCEEEECCTTTCCHHHHHHHHHHHHH--
T ss_pred EeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCC------CCceEEEeccccCCHHHHHHHHHHHHH--
Confidence 5777777666666553 2334799999999999888777765432 1334444333 344444443311
Q ss_pred cccCccEEEEccCCC
Q 012954 214 LRSGVDAILMDLGMS 228 (452)
Q Consensus 214 ~~~~VDGILfDLGvS 228 (452)
....+|+++.+=|+.
T Consensus 91 ~~g~id~lv~nAg~~ 105 (247)
T 3i1j_A 91 EFGRLDGLLHNASII 105 (247)
T ss_dssp HHSCCSEEEECCCCC
T ss_pred hCCCCCEEEECCccC
Confidence 123799999999975
No 438
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=37.74 E-value=85 Score=27.92 Aligned_cols=80 Identities=15% Similarity=0.138 Sum_probs=49.9
Q ss_pred EccCCChhHHHHHHhCC-CCC-------EEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHH---HHhh
Q 012954 140 CTLGAAGHSSAIIRAHP-ELK-------LHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKS---VLGQ 208 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~p-~~g-------~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~---~L~~ 208 (452)
.|=|.||=-.++.+.+- ... .|+++|++++.++...+.+...+ .++.++..+..+... ++.+
T Consensus 7 ITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~v~~~~~~ 79 (244)
T 2bd0_A 7 ITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEG-------ALTDTITADISDMADVRRLTTH 79 (244)
T ss_dssp EETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTT-------CEEEEEECCTTSHHHHHHHHHH
T ss_pred EECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccC-------CeeeEEEecCCCHHHHHHHHHH
Confidence 46666665555555431 122 69999999988877666565432 267788877776543 3332
Q ss_pred hcccccccCccEEEEccCCC
Q 012954 209 IDENILRSGVDAILMDLGMS 228 (452)
Q Consensus 209 ~~~~l~~~~VDGILfDLGvS 228 (452)
... ....+|+++.+-|+.
T Consensus 80 ~~~--~~g~id~li~~Ag~~ 97 (244)
T 2bd0_A 80 IVE--RYGHIDCLVNNAGVG 97 (244)
T ss_dssp HHH--HTSCCSEEEECCCCC
T ss_pred HHH--hCCCCCEEEEcCCcC
Confidence 211 013699999999875
No 439
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=37.71 E-value=1.1e+02 Score=23.84 Aligned_cols=54 Identities=17% Similarity=-0.025 Sum_probs=34.9
Q ss_pred EEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhcccccccCccEEEEccCCC
Q 012954 160 LHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMS 228 (452)
Q Consensus 160 ~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~l~~~~VDGILfDLGvS 228 (452)
+|+-+|-|+......+..|+..+. .+. ...+-...-+.+. ...+|.||+|+.+.
T Consensus 4 ~ILivdd~~~~~~~l~~~l~~~g~-------~v~-~~~~~~~al~~l~-------~~~~dlvllD~~~p 57 (122)
T 3gl9_A 4 KVLLVDDSAVLRKIVSFNLKKEGY-------EVI-EAENGQIALEKLS-------EFTPDLIVLXIMMP 57 (122)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC-------EEE-EESSHHHHHHHHT-------TBCCSEEEECSCCS
T ss_pred eEEEEeCCHHHHHHHHHHHHHCCc-------EEE-EeCCHHHHHHHHH-------hcCCCEEEEeccCC
Confidence 588899999988887777776532 343 2233333333333 24699999999764
No 440
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=37.41 E-value=1.1e+02 Score=27.58 Aligned_cols=85 Identities=13% Similarity=0.042 Sum_probs=52.6
Q ss_pred CCEEEEEccCCChhHHHHHHhC-CCCCEEEEEeC-CHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHH---HHhh
Q 012954 134 ITSFVDCTLGAAGHSSAIIRAH-PELKLHIGVDV-DPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKS---VLGQ 208 (452)
Q Consensus 134 ggiyVDaTlG~GGHS~aIL~~~-p~~g~VigfDr-D~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~---~L~~ 208 (452)
+..++ .|=|.||=-.++.+.+ .....|+++|+ +++.++...+.+...+ .++.++..+..+.+. ++.+
T Consensus 21 ~k~vl-ItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~-------~~~~~~~~D~~~~~~~~~~~~~ 92 (274)
T 1ja9_A 21 GKVAL-TTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLG-------AQGVAIQADISKPSEVVALFDK 92 (274)
T ss_dssp TCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-------CCEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEE-EeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcC-------CcEEEEEecCCCHHHHHHHHHH
Confidence 34443 5777777666666653 22347999999 8887776666665542 256777777765443 3332
Q ss_pred hcccccccCccEEEEccCCC
Q 012954 209 IDENILRSGVDAILMDLGMS 228 (452)
Q Consensus 209 ~~~~l~~~~VDGILfDLGvS 228 (452)
... ....+|+++.+-|+.
T Consensus 93 ~~~--~~~~~d~vi~~Ag~~ 110 (274)
T 1ja9_A 93 AVS--HFGGLDFVMSNSGME 110 (274)
T ss_dssp HHH--HHSCEEEEECCCCCC
T ss_pred HHH--HcCCCCEEEECCCCC
Confidence 210 113699999888865
No 441
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=37.39 E-value=1.2e+02 Score=24.45 Aligned_cols=59 Identities=15% Similarity=-0.028 Sum_probs=39.2
Q ss_pred CCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhcccccccCccEEEEccCCC
Q 012954 157 ELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMS 228 (452)
Q Consensus 157 ~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~l~~~~VDGILfDLGvS 228 (452)
...+|+-+|-|+...+.-+..|+..+. ..+.....+..+..+.+.+ ..+|.||+|+.+.
T Consensus 14 ~~~~iLivdd~~~~~~~l~~~L~~~~~------~~~v~~~~~~~~a~~~l~~-------~~~dlii~d~~l~ 72 (152)
T 3eul_A 14 EKVRVVVGDDHPLFREGVVRALSLSGS------VNVVGEADDGAAALELIKA-------HLPDVALLDYRMP 72 (152)
T ss_dssp CCEEEEEECSSHHHHHHHHHHHHHHSS------EEEEEEESSHHHHHHHHHH-------HCCSEEEEETTCS
T ss_pred ceEEEEEEcCCHHHHHHHHHHHhhCCC------eEEEEEeCCHHHHHHHHHh-------cCCCEEEEeCCCC
Confidence 345799999999999888888877642 1122234455555444443 3699999998654
No 442
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=37.38 E-value=11 Score=34.09 Aligned_cols=24 Identities=13% Similarity=-0.017 Sum_probs=19.3
Q ss_pred HHHHHHHHHHhhcCCCeEEEEeec
Q 012954 346 LESSLHACFDCLAPGGRLGVISFH 369 (452)
Q Consensus 346 L~~~L~~a~~~L~pGGRLvVISFH 369 (452)
.+.+|..+..+|+|||++++...+
T Consensus 140 ~~~~l~~~~r~LkpgG~l~i~~~~ 163 (210)
T 1nt2_A 140 IEILKANAEFFLKEKGEVVIMVKA 163 (210)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred HHHHHHHHHHHhCCCCEEEEEEec
Confidence 445678889999999999998533
No 443
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=37.26 E-value=32 Score=34.76 Aligned_cols=29 Identities=21% Similarity=0.115 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHhhcCCCeEEEEeecch
Q 012954 343 LKTLESSLHACFDCLAPGGRLGVISFHSL 371 (452)
Q Consensus 343 L~~L~~~L~~a~~~L~pGGRLvVISFHSL 371 (452)
+.....++..+.++|+|||+|++.|....
T Consensus 302 ~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~ 330 (393)
T 4dmg_A 302 KRHLVDLVREALRLLAEEGFLWLSSCSYH 330 (393)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 34567788999999999999998777554
No 444
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=37.23 E-value=24 Score=34.08 Aligned_cols=26 Identities=23% Similarity=0.241 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeecc
Q 012954 345 TLESSLHACFDCLAPGGRLGVISFHS 370 (452)
Q Consensus 345 ~L~~~L~~a~~~L~pGGRLvVISFHS 370 (452)
.....|..+.+.|+|||+|+|+.+.-
T Consensus 264 ~~~~~L~~~~~~LkpgG~l~i~e~~~ 289 (348)
T 3lst_A 264 DSVRILTNCRRVMPAHGRVLVIDAVV 289 (348)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEEECCB
T ss_pred HHHHHHHHHHHhcCCCCEEEEEEecc
Confidence 34678889999999999999987643
No 445
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=37.07 E-value=15 Score=33.16 Aligned_cols=27 Identities=30% Similarity=0.287 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeecch
Q 012954 345 TLESSLHACFDCLAPGGRLGVISFHSL 371 (452)
Q Consensus 345 ~L~~~L~~a~~~L~pGGRLvVISFHSL 371 (452)
....+|..+..+|+|||++++.++...
T Consensus 110 ~~~~~l~~~~~~L~pgG~l~~~~~~~~ 136 (259)
T 2p35_A 110 DHLAVLSQLMDQLESGGVLAVQMPDNL 136 (259)
T ss_dssp THHHHHHHHGGGEEEEEEEEEEEECCT
T ss_pred CHHHHHHHHHHhcCCCeEEEEEeCCCC
Confidence 466789999999999999999987653
No 446
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=37.05 E-value=13 Score=32.79 Aligned_cols=25 Identities=32% Similarity=0.327 Sum_probs=21.3
Q ss_pred HHHHHHHHH-HhhcCCCeEEEEeecc
Q 012954 346 LESSLHACF-DCLAPGGRLGVISFHS 370 (452)
Q Consensus 346 L~~~L~~a~-~~L~pGGRLvVISFHS 370 (452)
...+|..+. .+|+|||++++.+++.
T Consensus 119 ~~~~l~~~~~~~LkpgG~l~i~~~~~ 144 (250)
T 2p7i_A 119 PVALLKRINDDWLAEGGRLFLVCPNA 144 (250)
T ss_dssp HHHHHHHHHHTTEEEEEEEEEEEECT
T ss_pred HHHHHHHHHHHhcCCCCEEEEEcCCh
Confidence 357888899 9999999999988764
No 447
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=36.96 E-value=1.2e+02 Score=27.51 Aligned_cols=81 Identities=16% Similarity=0.172 Sum_probs=49.0
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHH---HHHhhhcccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIK---SVLGQIDENILR 215 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~---~~L~~~~~~l~~ 215 (452)
.|=|.||=-.++.+.+ ....+|+++|++++.++...+.+..... ..++.++..+..+.+ ..+.+... .
T Consensus 12 VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~---~ 83 (260)
T 2z1n_A 12 VTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVS-----GAQVDIVAGDIREPGDIDRLFEKARD---L 83 (260)
T ss_dssp EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHST-----TCCEEEEECCTTCHHHHHHHHHHHHH---T
T ss_pred EECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-----CCeEEEEEccCCCHHHHHHHHHHHHH---h
Confidence 4667777666666553 2234799999999888776665543200 115666776766544 33433211 1
Q ss_pred cCccEEEEccCCC
Q 012954 216 SGVDAILMDLGMS 228 (452)
Q Consensus 216 ~~VDGILfDLGvS 228 (452)
.++|.++-+-|+.
T Consensus 84 ~gid~lv~~Ag~~ 96 (260)
T 2z1n_A 84 GGADILVYSTGGP 96 (260)
T ss_dssp TCCSEEEECCCCC
T ss_pred cCCCEEEECCCCC
Confidence 1399999988874
No 448
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=36.91 E-value=1.5e+02 Score=26.27 Aligned_cols=81 Identities=19% Similarity=0.082 Sum_probs=50.9
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHh-hhccCCCCCCceEEEEccCcchHHHH---Hhhhccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLN-SLLHGQAHPHLKTHTFAKNFRHIKSV---LGQIDENIL 214 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~-~~~~~~~~~~~r~~li~~nF~~i~~~---L~~~~~~l~ 214 (452)
.|=|.||=-.++.+.+ ..+..|+..|++++.++.+.+.+. ..+ .++.++..+.++.+++ +++... .
T Consensus 7 ITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~v~~~~~~~~~--~ 77 (235)
T 3l77_A 7 ITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQG-------VEVFYHHLDVSKAESVEEFSKKVLE--R 77 (235)
T ss_dssp EESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC-------CCEEEEECCTTCHHHHHHHCC-HHH--H
T ss_pred EECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC-------CeEEEEEeccCCHHHHHHHHHHHHH--h
Confidence 3666666556665553 223469999999998887766664 332 2677777777665544 332211 0
Q ss_pred ccCccEEEEccCCCc
Q 012954 215 RSGVDAILMDLGMSS 229 (452)
Q Consensus 215 ~~~VDGILfDLGvSS 229 (452)
...+|.++-+=|++.
T Consensus 78 ~g~id~li~~Ag~~~ 92 (235)
T 3l77_A 78 FGDVDVVVANAGLGY 92 (235)
T ss_dssp HSSCSEEEECCCCCC
T ss_pred cCCCCEEEECCcccc
Confidence 136999999998753
No 449
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=36.82 E-value=1.2e+02 Score=28.18 Aligned_cols=81 Identities=17% Similarity=0.151 Sum_probs=49.9
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeC-CHHHHHHHHHHHhhhccCCCCCCceEEEEccCcch---HHHHHhhhccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDV-DPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRH---IKSVLGQIDENIL 214 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDr-D~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~---i~~~L~~~~~~l~ 214 (452)
.|=|.||=-.++.+.+ ....+|+.+|+ +++.++...+.+...+ .++.++..+.++ +.+++.+... .
T Consensus 34 VTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~Dv~d~~~v~~~~~~~~~--~ 104 (280)
T 4da9_A 34 VTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLG-------ARVIFLRADLADLSSHQATVDAVVA--E 104 (280)
T ss_dssp EETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTT-------CCEEEEECCTTSGGGHHHHHHHHHH--H
T ss_pred EecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcC-------CcEEEEEecCCCHHHHHHHHHHHHH--H
Confidence 4777777666666653 23357899995 8888877766666543 256777666554 4444443311 1
Q ss_pred ccCccEEEEccCCCc
Q 012954 215 RSGVDAILMDLGMSS 229 (452)
Q Consensus 215 ~~~VDGILfDLGvSS 229 (452)
...+|.++-+=|+++
T Consensus 105 ~g~iD~lvnnAg~~~ 119 (280)
T 4da9_A 105 FGRIDCLVNNAGIAS 119 (280)
T ss_dssp HSCCCEEEEECC---
T ss_pred cCCCCEEEECCCccc
Confidence 237999999999854
No 450
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=36.80 E-value=31 Score=32.71 Aligned_cols=22 Identities=9% Similarity=-0.126 Sum_probs=19.1
Q ss_pred HHHHHHHhhcCCC--eEEEEeecc
Q 012954 349 SLHACFDCLAPGG--RLGVISFHS 370 (452)
Q Consensus 349 ~L~~a~~~L~pGG--RLvVISFHS 370 (452)
+|..+..+|+||| ++++-.|+.
T Consensus 165 ~L~~~~r~LkpGG~~~fv~kv~~~ 188 (265)
T 2oxt_A 165 ILELLEKWKVKNPSADFVVKVLCP 188 (265)
T ss_dssp HHHHHHHHHHHCTTCEEEEEESCT
T ss_pred HHHHHHHHhccCCCeEEEEEeCCC
Confidence 7788889999999 999988883
No 451
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=36.79 E-value=1.1e+02 Score=27.99 Aligned_cols=82 Identities=11% Similarity=-0.065 Sum_probs=51.4
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeC-CHHHHHHHHHHHhhhccCCCCCCceEEEEccCcch-------HHHHHhhhc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDV-DPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRH-------IKSVLGQID 210 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDr-D~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~-------i~~~L~~~~ 210 (452)
.|=|.||=-.++.+.+ ....+|+.+|+ +++.++.+.+.+..... .++.++..+..+ +..++.+..
T Consensus 16 VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~------~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 89 (276)
T 1mxh_A 16 ITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARA------GSAVLCKGDLSLSSSLLDCCEDIIDCSF 89 (276)
T ss_dssp ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST------TCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred EeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcC------CceEEEeccCCCccccHHHHHHHHHHHH
Confidence 6888887767666653 23357999999 98888776666654311 156666666544 334443321
Q ss_pred ccccccCccEEEEccCCCc
Q 012954 211 ENILRSGVDAILMDLGMSS 229 (452)
Q Consensus 211 ~~l~~~~VDGILfDLGvSS 229 (452)
. ....+|.++-+-|+..
T Consensus 90 ~--~~g~id~lv~nAg~~~ 106 (276)
T 1mxh_A 90 R--AFGRCDVLVNNASAYY 106 (276)
T ss_dssp H--HHSCCCEEEECCCCCC
T ss_pred H--hcCCCCEEEECCCCCC
Confidence 1 0136999999999864
No 452
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=36.79 E-value=18 Score=30.67 Aligned_cols=26 Identities=19% Similarity=0.074 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeecc
Q 012954 345 TLESSLHACFDCLAPGGRLGVISFHS 370 (452)
Q Consensus 345 ~L~~~L~~a~~~L~pGGRLvVISFHS 370 (452)
.+..+|..+..+|+|||++++...+.
T Consensus 125 ~~~~~l~~~~~~l~~~G~l~~~~~~~ 150 (195)
T 3cgg_A 125 GREPALANIHRALGADGRAVIGFGAG 150 (195)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEETT
T ss_pred HHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 45788888999999999998866543
No 453
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=36.63 E-value=17 Score=32.28 Aligned_cols=28 Identities=21% Similarity=0.329 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHhhcCCCeEEEEeecchh
Q 012954 344 KTLESSLHACFDCLAPGGRLGVISFHSLE 372 (452)
Q Consensus 344 ~~L~~~L~~a~~~L~pGGRLvVISFHSLE 372 (452)
+.+..+|..+..+|+|||++++ ++++.+
T Consensus 114 ~~~~~~l~~~~~~L~pgG~l~~-~~~~~~ 141 (243)
T 3d2l_A 114 ADVKQTFDSAARLLTDGGKLLF-DVHSPY 141 (243)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEE-EEECHH
T ss_pred HHHHHHHHHHHHhcCCCeEEEE-EcCCHH
Confidence 5677889999999999999975 555543
No 454
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=36.28 E-value=1.2e+02 Score=28.14 Aligned_cols=80 Identities=11% Similarity=0.079 Sum_probs=51.3
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchH---HHHHhhhcccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHI---KSVLGQIDENILR 215 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i---~~~L~~~~~~l~~ 215 (452)
.|=|.||=-.++.+.+ ..+.+|+.+|++++.++...+.+...+. ++..+..+.++. ..++.+... ..
T Consensus 33 VTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-------~~~~~~~Dv~d~~~v~~~~~~~~~--~~ 103 (270)
T 3ftp_A 33 VTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGL-------EGRGAVLNVNDATAVDALVESTLK--EF 103 (270)
T ss_dssp ETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTC-------CCEEEECCTTCHHHHHHHHHHHHH--HH
T ss_pred EECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-------cEEEEEEeCCCHHHHHHHHHHHHH--Hc
Confidence 4777777666666553 2335799999999988887777765432 455566555544 444443211 12
Q ss_pred cCccEEEEccCCC
Q 012954 216 SGVDAILMDLGMS 228 (452)
Q Consensus 216 ~~VDGILfDLGvS 228 (452)
..+|.++-+=|+.
T Consensus 104 g~iD~lvnnAg~~ 116 (270)
T 3ftp_A 104 GALNVLVNNAGIT 116 (270)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 3699999999875
No 455
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=36.23 E-value=88 Score=29.16 Aligned_cols=80 Identities=13% Similarity=0.066 Sum_probs=51.0
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHH-------HHHHHHHHHhhhccCCCCCCceEEEEccCcchHHH---HHhh
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPS-------ALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKS---VLGQ 208 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~-------Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~---~L~~ 208 (452)
.|=|.||=-.+|.+.+ ....+|+.+|++++ .++.+.+.++..+ .++.++..+.++.++ ++.+
T Consensus 14 VTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~Dv~~~~~v~~~~~~ 86 (285)
T 3sc4_A 14 ISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAG-------GQALPIVGDIRDGDAVAAAVAK 86 (285)
T ss_dssp EESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHT-------SEEEEEECCTTSHHHHHHHHHH
T ss_pred EECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcC-------CcEEEEECCCCCHHHHHHHHHH
Confidence 4777777767776663 33457999999976 4555555555543 267778777765443 3433
Q ss_pred hcccccccCccEEEEccCCC
Q 012954 209 IDENILRSGVDAILMDLGMS 228 (452)
Q Consensus 209 ~~~~l~~~~VDGILfDLGvS 228 (452)
... ....+|+++-+=|+.
T Consensus 87 ~~~--~~g~id~lvnnAg~~ 104 (285)
T 3sc4_A 87 TVE--QFGGIDICVNNASAI 104 (285)
T ss_dssp HHH--HHSCCSEEEECCCCC
T ss_pred HHH--HcCCCCEEEECCCCC
Confidence 211 123799999999975
No 456
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=36.20 E-value=1.4e+02 Score=27.46 Aligned_cols=81 Identities=17% Similarity=0.120 Sum_probs=51.4
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCC------------HHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHH---
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVD------------PSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIK--- 203 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD------------~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~--- 203 (452)
.|=|.||=-.++.+.+ ....+|+.+|++ .+.++...+.+...+ .++.++..+.++.+
T Consensus 15 VTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~Dv~~~~~v~ 87 (281)
T 3s55_A 15 ITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTG-------RRCISAKVDVKDRAALE 87 (281)
T ss_dssp EETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTT-------CCEEEEECCTTCHHHHH
T ss_pred EeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcC-------CeEEEEeCCCCCHHHHH
Confidence 4777777666666653 234579999997 677766666665543 26777777766543
Q ss_pred HHHhhhcccccccCccEEEEccCCCc
Q 012954 204 SVLGQIDENILRSGVDAILMDLGMSS 229 (452)
Q Consensus 204 ~~L~~~~~~l~~~~VDGILfDLGvSS 229 (452)
.++++... ...++|.++-+=|++.
T Consensus 88 ~~~~~~~~--~~g~id~lv~nAg~~~ 111 (281)
T 3s55_A 88 SFVAEAED--TLGGIDIAITNAGIST 111 (281)
T ss_dssp HHHHHHHH--HHTCCCEEEECCCCCC
T ss_pred HHHHHHHH--hcCCCCEEEECCCCCC
Confidence 34443211 0136999999999753
No 457
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=36.16 E-value=76 Score=30.01 Aligned_cols=81 Identities=15% Similarity=0.079 Sum_probs=53.2
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHH---Hhhhcccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSV---LGQIDENILR 215 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~---L~~~~~~l~~ 215 (452)
.|=|.||=-.+|.+.+ ..+.+|+.+|++++.++.+.+.+...+. .++.++..+.++.+++ +.+... ..
T Consensus 46 VTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~------~~~~~~~~Dv~d~~~v~~~~~~~~~--~~ 117 (293)
T 3rih_A 46 VTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGA------GNVIGVRLDVSDPGSCADAARTVVD--AF 117 (293)
T ss_dssp ETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSS------SCEEEEECCTTCHHHHHHHHHHHHH--HH
T ss_pred EeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCC------CcEEEEEEeCCCHHHHHHHHHHHHH--Hc
Confidence 5878887666666653 2334799999999888877776765431 2677787777765443 332211 12
Q ss_pred cCccEEEEccCCC
Q 012954 216 SGVDAILMDLGMS 228 (452)
Q Consensus 216 ~~VDGILfDLGvS 228 (452)
..+|.++-+=|+.
T Consensus 118 g~iD~lvnnAg~~ 130 (293)
T 3rih_A 118 GALDVVCANAGIF 130 (293)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 3699999998874
No 458
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=36.12 E-value=14 Score=34.27 Aligned_cols=24 Identities=21% Similarity=0.055 Sum_probs=20.7
Q ss_pred HHHHHHHHHhhcCCCeEEEEeecc
Q 012954 347 ESSLHACFDCLAPGGRLGVISFHS 370 (452)
Q Consensus 347 ~~~L~~a~~~L~pGGRLvVISFHS 370 (452)
..+|..+..+|+|||+|++.|-+.
T Consensus 148 ~~~l~~~~~~LkpGG~l~~~td~~ 171 (235)
T 3ckk_A 148 PTLLAEYAYVLRVGGLVYTITDVL 171 (235)
T ss_dssp HHHHHHHHHHEEEEEEEEEEESCH
T ss_pred HHHHHHHHHHCCCCCEEEEEeCCH
Confidence 467888899999999999999873
No 459
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=36.05 E-value=26 Score=34.40 Aligned_cols=26 Identities=19% Similarity=0.346 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeecc
Q 012954 345 TLESSLHACFDCLAPGGRLGVISFHS 370 (452)
Q Consensus 345 ~L~~~L~~a~~~L~pGGRLvVISFHS 370 (452)
...+.|..+.+.|+|||+|+|+.+..
T Consensus 278 ~~~~~l~~~~~~L~pgG~l~i~e~~~ 303 (368)
T 3reo_A 278 HCLKLLKNCYAALPDHGKVIVAEYIL 303 (368)
T ss_dssp HHHHHHHHHHHHSCTTCEEEEEECCC
T ss_pred HHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 45678999999999999999998763
No 460
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=35.97 E-value=1.1e+02 Score=27.50 Aligned_cols=80 Identities=19% Similarity=0.145 Sum_probs=49.6
Q ss_pred CCCEEEEEccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHH---HHhh
Q 012954 133 TITSFVDCTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKS---VLGQ 208 (452)
Q Consensus 133 ~ggiyVDaTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~---~L~~ 208 (452)
+++.++ .|=|.||=-.++.+.+ ....+|+.+|++++.++...+.+.. ++.++..+.++... ++.+
T Consensus 13 ~~k~vl-VTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----------~~~~~~~D~~~~~~~~~~~~~ 81 (249)
T 3f9i_A 13 TGKTSL-ITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKD----------NYTIEVCNLANKEECSNLISK 81 (249)
T ss_dssp TTCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCS----------SEEEEECCTTSHHHHHHHHHT
T ss_pred CCCEEE-EECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhcc----------CccEEEcCCCCHHHHHHHHHh
Confidence 344444 5777777666666553 2235799999999888776554421 46666666665444 3333
Q ss_pred hcccccccCccEEEEccCCCc
Q 012954 209 IDENILRSGVDAILMDLGMSS 229 (452)
Q Consensus 209 ~~~~l~~~~VDGILfDLGvSS 229 (452)
. ..+|.++.+-|+..
T Consensus 82 ~------~~id~li~~Ag~~~ 96 (249)
T 3f9i_A 82 T------SNLDILVCNAGITS 96 (249)
T ss_dssp C------SCCSEEEECCC---
T ss_pred c------CCCCEEEECCCCCC
Confidence 2 36999999999854
No 461
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=35.82 E-value=24 Score=32.80 Aligned_cols=25 Identities=24% Similarity=0.373 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeec
Q 012954 345 TLESSLHACFDCLAPGGRLGVISFH 369 (452)
Q Consensus 345 ~L~~~L~~a~~~L~pGGRLvVISFH 369 (452)
.++.+|..+..+|+|||+++++.-.
T Consensus 148 ~~~~~l~~~~~~LkpgG~l~~~~~~ 172 (260)
T 2ozv_A 148 LFEDWIRTASAIMVSGGQLSLISRP 172 (260)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEECG
T ss_pred CHHHHHHHHHHHcCCCCEEEEEEcH
Confidence 3678899999999999999887544
No 462
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=35.30 E-value=27 Score=34.26 Aligned_cols=27 Identities=19% Similarity=0.448 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHhhcCCCeEEEEeecc
Q 012954 344 KTLESSLHACFDCLAPGGRLGVISFHS 370 (452)
Q Consensus 344 ~~L~~~L~~a~~~L~pGGRLvVISFHS 370 (452)
+.....|..+.+.|+|||+|+|+-+..
T Consensus 275 ~~~~~~L~~~~~~L~pgG~l~i~e~~~ 301 (364)
T 3p9c_A 275 QHCATLLKNCYDALPAHGKVVLVQCIL 301 (364)
T ss_dssp HHHHHHHHHHHHHSCTTCEEEEEECCB
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 456788999999999999999988753
No 463
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=35.04 E-value=56 Score=32.74 Aligned_cols=75 Identities=15% Similarity=0.248 Sum_probs=49.0
Q ss_pred EEEEEccCCChhHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHH-HHhhhccccc
Q 012954 136 SFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKS-VLGQIDENIL 214 (452)
Q Consensus 136 iyVDaTlG~GGHS~aIL~~~p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~-~L~~~~~~l~ 214 (452)
.+||.=.|.||=+..+.+.- -..++|+|+|+.|++..+.+.. ...+++++-..+.. .+.... +.
T Consensus 4 ~vidLFsG~GGlslG~~~aG--~~~v~avE~d~~a~~t~~~N~~-----------~~~~~~~DI~~~~~~~~~~~~--~~ 68 (376)
T 3g7u_A 4 NVIDLFSGVGGLSLGAARAG--FDVKMAVEIDQHAINTHAINFP-----------RSLHVQEDVSLLNAEIIKGFF--KN 68 (376)
T ss_dssp EEEEETCTTSHHHHHHHHHT--CEEEEEECSCHHHHHHHHHHCT-----------TSEEECCCGGGCCHHHHHHHH--CS
T ss_pred eEEEEccCcCHHHHHHHHCC--CcEEEEEeCCHHHHHHHHHhCC-----------CCceEecChhhcCHHHHHhhc--cc
Confidence 68999999999999998763 3458899999999987765432 23345665554421 111100 01
Q ss_pred ccCccEEEEcc
Q 012954 215 RSGVDAILMDL 225 (452)
Q Consensus 215 ~~~VDGILfDL 225 (452)
...+|.|+.+.
T Consensus 69 ~~~~D~i~ggp 79 (376)
T 3g7u_A 69 DMPIDGIIGGP 79 (376)
T ss_dssp CCCCCEEEECC
T ss_pred CCCeeEEEecC
Confidence 23689888765
No 464
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=35.02 E-value=1.5e+02 Score=27.27 Aligned_cols=81 Identities=19% Similarity=0.165 Sum_probs=51.7
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeC-------------CHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHH-
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDV-------------DPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKS- 204 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDr-------------D~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~- 204 (452)
.|=|.||=-.++.+.+ ....+|+.+|+ +++.++.+.+.+...+ .++.++..+.++.++
T Consensus 16 VTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~v 88 (277)
T 3tsc_A 16 ITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAAN-------RRIVAAVVDTRDFDRL 88 (277)
T ss_dssp EESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTT-------CCEEEEECCTTCHHHH
T ss_pred EECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC-------CeEEEEECCCCCHHHH
Confidence 4777777666666653 23457999999 7888877766665542 257777766665443
Q ss_pred --HHhhhcccccccCccEEEEccCCCc
Q 012954 205 --VLGQIDENILRSGVDAILMDLGMSS 229 (452)
Q Consensus 205 --~L~~~~~~l~~~~VDGILfDLGvSS 229 (452)
++.+... ....+|.++-+=|+..
T Consensus 89 ~~~~~~~~~--~~g~id~lvnnAg~~~ 113 (277)
T 3tsc_A 89 RKVVDDGVA--ALGRLDIIVANAGVAA 113 (277)
T ss_dssp HHHHHHHHH--HHSCCCEEEECCCCCC
T ss_pred HHHHHHHHH--HcCCCCEEEECCCCCC
Confidence 3333211 0136999999999864
No 465
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=35.01 E-value=1.3e+02 Score=23.28 Aligned_cols=55 Identities=22% Similarity=0.100 Sum_probs=36.7
Q ss_pred CEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhcccccccCccEEEEccCCC
Q 012954 159 KLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMS 228 (452)
Q Consensus 159 g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~l~~~~VDGILfDLGvS 228 (452)
.+|+-+|-|+...+.-++.|+..+. .+. ...+..+..+.+.+ ..+|.||+|+...
T Consensus 7 ~~ilivdd~~~~~~~l~~~L~~~g~-------~v~-~~~~~~~a~~~l~~-------~~~dlii~d~~l~ 61 (132)
T 3lte_A 7 KRILVVDDDQAMAAAIERVLKRDHW-------QVE-IAHNGFDAGIKLST-------FEPAIMTLDLSMP 61 (132)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTC-------EEE-EESSHHHHHHHHHH-------TCCSEEEEESCBT
T ss_pred ccEEEEECCHHHHHHHHHHHHHCCc-------EEE-EeCCHHHHHHHHHh-------cCCCEEEEecCCC
Confidence 4689999999999888888876432 343 23344444334432 3699999998764
No 466
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=35.01 E-value=1.4e+02 Score=27.38 Aligned_cols=81 Identities=19% Similarity=0.125 Sum_probs=51.9
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeC-------------CHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHH--
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDV-------------DPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIK-- 203 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDr-------------D~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~-- 203 (452)
.|=|.||=-.++.+.+ ..+.+|+.+|+ +++.++.+.+.+...+ .++.++..+..+.+
T Consensus 20 VTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~Dv~~~~~v 92 (280)
T 3pgx_A 20 ITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQG-------RKALTRVLDVRDDAAL 92 (280)
T ss_dssp EESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTT-------CCEEEEECCTTCHHHH
T ss_pred EECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC-------CeEEEEEcCCCCHHHH
Confidence 4777777666666653 23457999998 7888877777666543 25777776666544
Q ss_pred -HHHhhhcccccccCccEEEEccCCCc
Q 012954 204 -SVLGQIDENILRSGVDAILMDLGMSS 229 (452)
Q Consensus 204 -~~L~~~~~~l~~~~VDGILfDLGvSS 229 (452)
+++.+... ....+|.++-+=|+..
T Consensus 93 ~~~~~~~~~--~~g~id~lvnnAg~~~ 117 (280)
T 3pgx_A 93 RELVADGME--QFGRLDVVVANAGVLS 117 (280)
T ss_dssp HHHHHHHHH--HHCCCCEEEECCCCCC
T ss_pred HHHHHHHHH--HcCCCCEEEECCCCCC
Confidence 33433211 1236999999988753
No 467
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=34.75 E-value=98 Score=28.70 Aligned_cols=101 Identities=15% Similarity=0.133 Sum_probs=58.1
Q ss_pred CCccccchHHHHhhccCCCCCCEEEEEccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceE
Q 012954 114 SSHIPVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKT 192 (452)
Q Consensus 114 ~~H~PVLl~Evl~~L~~~~~ggiyVDaTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~ 192 (452)
..|.+.|-...+-.| .+.+++ .|=|.||=-.++.+.+ ..+.+|+.+|++++.++.+.+.+...+. ++
T Consensus 10 ~~~~~~m~~~~~~~l----~gk~~l-VTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-------~~ 77 (271)
T 4ibo_A 10 LVPRGSMSNQIIFDL----GGRTAL-VTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGH-------DA 77 (271)
T ss_dssp --------CCGGGCC----TTCEEE-ETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTC-------CE
T ss_pred CCCcccCccccccCC----CCCEEE-EeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-------ce
Confidence 346666654432222 334332 4878887666666653 2345799999999998888777765432 57
Q ss_pred EEEccCcchHHH---HHhhhcccccccCccEEEEccCCC
Q 012954 193 HTFAKNFRHIKS---VLGQIDENILRSGVDAILMDLGMS 228 (452)
Q Consensus 193 ~li~~nF~~i~~---~L~~~~~~l~~~~VDGILfDLGvS 228 (452)
.++..+..+.++ ++++... ....+|.++-+=|++
T Consensus 78 ~~~~~Dv~d~~~v~~~~~~~~~--~~g~iD~lv~nAg~~ 114 (271)
T 4ibo_A 78 EAVAFDVTSESEIIEAFARLDE--QGIDVDILVNNAGIQ 114 (271)
T ss_dssp EECCCCTTCHHHHHHHHHHHHH--HTCCCCEEEECCCCC
T ss_pred EEEEcCCCCHHHHHHHHHHHHH--HCCCCCEEEECCCCC
Confidence 777777665544 3333211 123699999999975
No 468
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=34.75 E-value=1.4e+02 Score=23.12 Aligned_cols=54 Identities=17% Similarity=0.103 Sum_probs=35.1
Q ss_pred EEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhcccccccCccEEEEccCCC
Q 012954 160 LHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMS 228 (452)
Q Consensus 160 ~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~l~~~~VDGILfDLGvS 228 (452)
+|+-+|-|+...+..+..|+..+. .+.. ..+-.+.-+.+. ...+|.|++|+.+.
T Consensus 4 ~ilivdd~~~~~~~l~~~L~~~g~-------~v~~-~~~~~~al~~~~-------~~~~dlii~D~~~p 57 (120)
T 3f6p_A 4 KILVVDDEKPIADILEFNLRKEGY-------EVHC-AHDGNEAVEMVE-------ELQPDLILLDIMLP 57 (120)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC-------EEEE-ESSHHHHHHHHH-------TTCCSEEEEETTST
T ss_pred eEEEEECCHHHHHHHHHHHHhCCE-------EEEE-eCCHHHHHHHHh-------hCCCCEEEEeCCCC
Confidence 588899999988888877776532 3432 233333333333 23699999999765
No 469
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=34.70 E-value=1.4e+02 Score=26.94 Aligned_cols=78 Identities=12% Similarity=0.026 Sum_probs=48.7
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHH---HHHhhhcccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIK---SVLGQIDENILR 215 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~---~~L~~~~~~l~~ 215 (452)
.|=|.||=-.++.+.+ ..+.+|+.+|++++.++...+.+.. ++.++..+.++.+ .++.+... ..
T Consensus 8 VTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----------~~~~~~~D~~~~~~v~~~~~~~~~--~~ 75 (235)
T 3l6e_A 8 VTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGN----------AVIGIVADLAHHEDVDVAFAAAVE--WG 75 (235)
T ss_dssp EESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG----------GEEEEECCTTSHHHHHHHHHHHHH--HH
T ss_pred EECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC----------CceEEECCCCCHHHHHHHHHHHHH--hc
Confidence 3667777666666553 2335799999999988776665521 4666776665543 33433211 11
Q ss_pred cCccEEEEccCCCc
Q 012954 216 SGVDAILMDLGMSS 229 (452)
Q Consensus 216 ~~VDGILfDLGvSS 229 (452)
..+|.++-+=|+..
T Consensus 76 g~id~lvnnAg~~~ 89 (235)
T 3l6e_A 76 GLPELVLHCAGTGE 89 (235)
T ss_dssp CSCSEEEEECCCC-
T ss_pred CCCcEEEECCCCCC
Confidence 36999999999853
No 470
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=34.47 E-value=1.2e+02 Score=23.07 Aligned_cols=54 Identities=13% Similarity=0.102 Sum_probs=36.4
Q ss_pred EEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhcccccccCccEEEEccCCC
Q 012954 160 LHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMS 228 (452)
Q Consensus 160 ~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~l~~~~VDGILfDLGvS 228 (452)
+++-+|-|+...+.-+..|+..+. ++. ...+.....+.+.+ ..+|.|++|+...
T Consensus 7 ~ilivdd~~~~~~~l~~~L~~~g~-------~v~-~~~~~~~a~~~~~~-------~~~dlvi~d~~~~ 60 (127)
T 2gkg_A 7 KILIVESDTALSATLRSALEGRGF-------TVD-ETTDGKGSVEQIRR-------DRPDLVVLAVDLS 60 (127)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHTC-------EEE-EECCHHHHHHHHHH-------HCCSEEEEESBCG
T ss_pred eEEEEeCCHHHHHHHHHHHHhcCc-------eEE-EecCHHHHHHHHHh-------cCCCEEEEeCCCC
Confidence 588999999988888888877532 443 23444444444432 3699999999764
No 471
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=34.45 E-value=26 Score=31.96 Aligned_cols=23 Identities=22% Similarity=0.141 Sum_probs=19.1
Q ss_pred HHHHHHHHHhhcCCCeEEEEeec
Q 012954 347 ESSLHACFDCLAPGGRLGVISFH 369 (452)
Q Consensus 347 ~~~L~~a~~~L~pGGRLvVISFH 369 (452)
..+|..+..+|+|||+|++.|-.
T Consensus 153 ~~~l~~~~~~LkpgG~l~~~td~ 175 (246)
T 2vdv_E 153 NTLLSEYAYVLKEGGVVYTITDV 175 (246)
T ss_dssp HHHHHHHHHHEEEEEEEEEEESC
T ss_pred HHHHHHHHHHcCCCCEEEEEecc
Confidence 46778888999999999997744
No 472
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=34.32 E-value=15 Score=33.15 Aligned_cols=23 Identities=22% Similarity=0.286 Sum_probs=19.7
Q ss_pred HHHHHHHHHhhcCCCeEEEEeec
Q 012954 347 ESSLHACFDCLAPGGRLGVISFH 369 (452)
Q Consensus 347 ~~~L~~a~~~L~pGGRLvVISFH 369 (452)
..+|..+..+|+|||++++.+..
T Consensus 130 ~~~l~~~~~~L~pgG~l~~~~~~ 152 (257)
T 3f4k_A 130 ERGMNEWSKYLKKGGFIAVSEAS 152 (257)
T ss_dssp HHHHHHHHTTEEEEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCcEEEEEEee
Confidence 56888899999999999998743
No 473
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=34.24 E-value=17 Score=33.30 Aligned_cols=25 Identities=16% Similarity=0.097 Sum_probs=21.8
Q ss_pred HHHHHHHHHHhhcCCCeEEEEeecc
Q 012954 346 LESSLHACFDCLAPGGRLGVISFHS 370 (452)
Q Consensus 346 L~~~L~~a~~~L~pGGRLvVISFHS 370 (452)
+..+|..+..+|+|||++++.++..
T Consensus 131 ~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 131 KDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred HHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 6788999999999999999887763
No 474
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=34.15 E-value=17 Score=33.67 Aligned_cols=25 Identities=28% Similarity=0.577 Sum_probs=20.8
Q ss_pred HHHHHHHHHHhhcCCCeEEEEeecc
Q 012954 346 LESSLHACFDCLAPGGRLGVISFHS 370 (452)
Q Consensus 346 L~~~L~~a~~~L~pGGRLvVISFHS 370 (452)
...+|..+..+|+|||++++..+..
T Consensus 152 ~~~~l~~~~~~LkpgG~l~~~~~~~ 176 (285)
T 4htf_A 152 PRSVLQTLWSVLRPGGVLSLMFYNA 176 (285)
T ss_dssp HHHHHHHHHHTEEEEEEEEEEEEBH
T ss_pred HHHHHHHHHHHcCCCeEEEEEEeCC
Confidence 3678888999999999998877654
No 475
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=34.15 E-value=25 Score=32.71 Aligned_cols=41 Identities=17% Similarity=0.206 Sum_probs=29.1
Q ss_pred hhHHHHHHHHHHHHHhhcCCCeEEEEeecchhHHHHHHHHHh
Q 012954 341 DELKTLESSLHACFDCLAPGGRLGVISFHSLEDRIVKQTFLS 382 (452)
Q Consensus 341 ~EL~~L~~~L~~a~~~L~pGGRLvVISFHSLEDRIVK~~F~~ 382 (452)
+-++.+..+|..+..+|+|||++++..-+.-. .-+++.+++
T Consensus 212 ~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~-~~~~~~l~~ 252 (276)
T 2b3t_A 212 SGMADIVHIIEQSRNALVSGGFLLLEHGWQQG-EAVRQAFIL 252 (276)
T ss_dssp HHTHHHHHHHHHHGGGEEEEEEEEEECCSSCH-HHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhcCCCCEEEEEECchHH-HHHHHHHHH
Confidence 44577889999999999999999885433322 235556654
No 476
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=34.11 E-value=14 Score=35.62 Aligned_cols=24 Identities=13% Similarity=0.306 Sum_probs=20.5
Q ss_pred HHHHHHHHHHhhcCCCeEEEEeec
Q 012954 346 LESSLHACFDCLAPGGRLGVISFH 369 (452)
Q Consensus 346 L~~~L~~a~~~L~pGGRLvVISFH 369 (452)
+..+|..+..+|+|||++++.+.+
T Consensus 148 ~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 148 YATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHcCCCCEEEEEeCC
Confidence 478999999999999999776655
No 477
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=33.99 E-value=1.3e+02 Score=23.84 Aligned_cols=53 Identities=17% Similarity=0.194 Sum_probs=35.5
Q ss_pred CEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhcccccccCccEEEEccCC
Q 012954 159 KLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGM 227 (452)
Q Consensus 159 g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~l~~~~VDGILfDLGv 227 (452)
.+|+-+|-|+...+.-+..|+..+. .+. ...+.....+.+.. ..+|.||+|+ .
T Consensus 5 ~~iLivdd~~~~~~~l~~~L~~~g~-------~v~-~~~~~~~a~~~l~~-------~~~dlvi~d~-~ 57 (142)
T 2qxy_A 5 PTVMVVDESRITFLAVKNALEKDGF-------NVI-WAKNEQEAFTFLRR-------EKIDLVFVDV-F 57 (142)
T ss_dssp CEEEEECSCHHHHHHHHHHHGGGTC-------EEE-EESSHHHHHHHHTT-------SCCSEEEEEC-T
T ss_pred CeEEEEeCCHHHHHHHHHHHHhCCC-------EEE-EECCHHHHHHHHhc-------cCCCEEEEeC-C
Confidence 3688999999999888888876532 343 33344444344432 3699999998 5
No 478
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=33.92 E-value=18 Score=32.00 Aligned_cols=27 Identities=22% Similarity=0.295 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHhhcCCCeEEEEeecch
Q 012954 344 KTLESSLHACFDCLAPGGRLGVISFHSL 371 (452)
Q Consensus 344 ~~L~~~L~~a~~~L~pGGRLvVISFHSL 371 (452)
..+..+|..+.++|+|||++++ +.++.
T Consensus 119 ~~~~~~l~~~~~~L~pgG~l~~-~~~~~ 145 (246)
T 1y8c_A 119 DDLKKYFKAVSNHLKEGGVFIF-DINSY 145 (246)
T ss_dssp HHHHHHHHHHHTTEEEEEEEEE-EEECH
T ss_pred HHHHHHHHHHHHhcCCCcEEEE-EecCH
Confidence 4677889999999999999986 55543
No 479
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=33.84 E-value=1.5e+02 Score=27.68 Aligned_cols=81 Identities=11% Similarity=-0.055 Sum_probs=53.0
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEe-CCHHHHHHHHHHHh-hhccCCCCCCceEEEEccCcc----------------
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVD-VDPSALAKARAHLN-SLLHGQAHPHLKTHTFAKNFR---------------- 200 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfD-rD~~Ai~~Ak~rL~-~~~~~~~~~~~r~~li~~nF~---------------- 200 (452)
.|=|.||=-.+|.+.+ .....|+.+| ++++.++.+.+.+. .++ .++.++..+.+
T Consensus 14 VTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~-------~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 86 (291)
T 1e7w_A 14 VTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP-------NSAITVQADLSNVATAPVSGADGSAPV 86 (291)
T ss_dssp ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-------TCEEEEECCCSSSCBCCCC----CCCB
T ss_pred EECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcC-------CeeEEEEeecCCccccccccccccccc
Confidence 5888888777777763 2335799999 99998887766665 332 24666665544
Q ss_pred ----hHHHHHhhhcccccccCccEEEEccCCCc
Q 012954 201 ----HIKSVLGQIDENILRSGVDAILMDLGMSS 229 (452)
Q Consensus 201 ----~i~~~L~~~~~~l~~~~VDGILfDLGvSS 229 (452)
.+.+++.+... ....+|.++-+-|+..
T Consensus 87 ~~~~~v~~~~~~~~~--~~g~iD~lvnnAg~~~ 117 (291)
T 1e7w_A 87 TLFTRCAELVAACYT--HWGRCDVLVNNASSFY 117 (291)
T ss_dssp CHHHHHHHHHHHHHH--HHSCCCEEEECCCCCC
T ss_pred chHHHHHHHHHHHHH--hcCCCCEEEECCCCCC
Confidence 45455543311 1236999999999864
No 480
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=33.84 E-value=1.3e+02 Score=24.32 Aligned_cols=55 Identities=15% Similarity=0.084 Sum_probs=36.2
Q ss_pred CEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhcccccccCccEEEEccCCC
Q 012954 159 KLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMS 228 (452)
Q Consensus 159 g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~l~~~~VDGILfDLGvS 228 (452)
-+|+-+|-|+.....-+..|+..+. .+. ...+.......+.+ ..+|.||+|+...
T Consensus 8 ~~iLivdd~~~~~~~l~~~L~~~g~-------~v~-~~~~~~~a~~~l~~-------~~~dlvi~d~~l~ 62 (154)
T 2rjn_A 8 YTVMLVDDEQPILNSLKRLIKRLGC-------NII-TFTSPLDALEALKG-------TSVQLVISDMRMP 62 (154)
T ss_dssp CEEEEECSCHHHHHHHHHHHHTTTC-------EEE-EESCHHHHHHHHTT-------SCCSEEEEESSCS
T ss_pred CeEEEEcCCHHHHHHHHHHHHHcCC-------eEE-EeCCHHHHHHHHhc-------CCCCEEEEecCCC
Confidence 3688999999988888887876432 343 23344444334332 3699999998764
No 481
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=33.67 E-value=1.4e+02 Score=28.35 Aligned_cols=83 Identities=14% Similarity=0.093 Sum_probs=53.4
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHH---HHhhhcccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKS---VLGQIDENILR 215 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~---~L~~~~~~l~~ 215 (452)
.|=|.||=-.+|.+.+ ..+.+|++.|++++.++.+.+.+...+. ..++.++..+.++... ++..... ..
T Consensus 13 VTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~~--~~ 85 (319)
T 3ioy_A 13 VTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGS-----GPEVMGVQLDVASREGFKMAADEVEA--RF 85 (319)
T ss_dssp EETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTC-----GGGEEEEECCTTCHHHHHHHHHHHHH--HT
T ss_pred EcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-----CCeEEEEECCCCCHHHHHHHHHHHHH--hC
Confidence 4777777666666653 2334799999999998888777765432 1257777766665443 3433211 01
Q ss_pred cCccEEEEccCCCc
Q 012954 216 SGVDAILMDLGMSS 229 (452)
Q Consensus 216 ~~VDGILfDLGvSS 229 (452)
..+|.++-+=|+..
T Consensus 86 g~id~lv~nAg~~~ 99 (319)
T 3ioy_A 86 GPVSILCNNAGVNL 99 (319)
T ss_dssp CCEEEEEECCCCCC
T ss_pred CCCCEEEECCCcCC
Confidence 36999999999753
No 482
>1dz3_A Stage 0 sporulation protein A; response regulator, domain swapping; 1.65A {Bacillus stearothermophilus} SCOP: c.23.1.1 PDB: 1qmp_A*
Probab=33.63 E-value=1.4e+02 Score=23.21 Aligned_cols=56 Identities=16% Similarity=0.081 Sum_probs=34.9
Q ss_pred EEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhcccccccCccEEEEccCCC
Q 012954 160 LHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMS 228 (452)
Q Consensus 160 ~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~l~~~~VDGILfDLGvS 228 (452)
+|+-+|-|+...+.-+..|+.... ..+.....+....-+.+.. ..+|.||+|+.++
T Consensus 4 ~ilivdd~~~~~~~l~~~l~~~~~------~~~~~~~~~~~~a~~~~~~-------~~~dlvllD~~l~ 59 (130)
T 1dz3_A 4 KVCIADDNRELVSLLDEYISSQPD------MEVIGTAYNGQDCLQMLEE-------KRPDILLLDIIMP 59 (130)
T ss_dssp EEEEECSCHHHHHHHHHHHHTSTT------EEEEEEESSHHHHHHHHHH-------HCCSEEEEESCCS
T ss_pred EEEEEcCCHHHHHHHHHHHHhCCC------ceEEEEeCCHHHHHHHHhc-------CCCCEEEEecCCC
Confidence 578889999888877777765311 1222123454444444432 3589999999764
No 483
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=33.41 E-value=31 Score=33.72 Aligned_cols=28 Identities=7% Similarity=-0.001 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHhhcCCCeEEEEeecchh
Q 012954 345 TLESSLHACFDCLAPGGRLGVISFHSLE 372 (452)
Q Consensus 345 ~L~~~L~~a~~~L~pGGRLvVISFHSLE 372 (452)
.....|..+.+.|+|||+|+|+.+-.-+
T Consensus 265 ~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 292 (363)
T 3dp7_A 265 EVISILTRVAQSIGKDSKVYIMETLWDR 292 (363)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEEECCTTS
T ss_pred HHHHHHHHHHHhcCCCcEEEEEeeccCC
Confidence 5567889999999999999998764433
No 484
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=33.38 E-value=12 Score=34.33 Aligned_cols=22 Identities=27% Similarity=0.412 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHhhcCCCeEEE
Q 012954 344 KTLESSLHACFDCLAPGGRLGV 365 (452)
Q Consensus 344 ~~L~~~L~~a~~~L~pGGRLvV 365 (452)
...+.++..+..+|||||+++.
T Consensus 147 ~~~~~~~~e~~rvLkPGG~l~f 168 (236)
T 3orh_A 147 HQFNFIKNHAFRLLKPGGVLTY 168 (236)
T ss_dssp HHHHHHHHTHHHHEEEEEEEEE
T ss_pred cchhhhhhhhhheeCCCCEEEE
Confidence 4567788889999999999864
No 485
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=33.37 E-value=16 Score=33.33 Aligned_cols=23 Identities=22% Similarity=0.286 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHhhcCCCeEEEE
Q 012954 344 KTLESSLHACFDCLAPGGRLGVI 366 (452)
Q Consensus 344 ~~L~~~L~~a~~~L~pGGRLvVI 366 (452)
+.+..+|..+.++|+|||+++|-
T Consensus 128 ~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 128 AELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp HHHHHHHHHHHHTEEEEEEEEEC
T ss_pred HHHHHHHHHHHHhcCCCcEEEEE
Confidence 46778899999999999999884
No 486
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=33.25 E-value=86 Score=27.94 Aligned_cols=84 Identities=13% Similarity=0.059 Sum_probs=52.0
Q ss_pred CCEEEEEccCCChhHHHHHHhC-CCCCEEEEEeCC-HHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHH---Hhh
Q 012954 134 ITSFVDCTLGAAGHSSAIIRAH-PELKLHIGVDVD-PSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSV---LGQ 208 (452)
Q Consensus 134 ggiyVDaTlG~GGHS~aIL~~~-p~~g~VigfDrD-~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~---L~~ 208 (452)
+..++ .|=|.||=-.++.+.+ .....|+++|++ ++.++...+.+...+ .++.++..+..+.+++ +.+
T Consensus 7 ~k~vl-VTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~ 78 (258)
T 3afn_B 7 GKRVL-ITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADG-------GDAAFFAADLATSEACQQLVDE 78 (258)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTT-------CEEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEE-EeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcC-------CceEEEECCCCCHHHHHHHHHH
Confidence 34444 5777777666666653 233479999998 776666555555432 2677787777665433 332
Q ss_pred hcccccccCccEEEEccCC
Q 012954 209 IDENILRSGVDAILMDLGM 227 (452)
Q Consensus 209 ~~~~l~~~~VDGILfDLGv 227 (452)
... ...++|.++-+-|+
T Consensus 79 ~~~--~~g~id~vi~~Ag~ 95 (258)
T 3afn_B 79 FVA--KFGGIDVLINNAGG 95 (258)
T ss_dssp HHH--HHSSCSEEEECCCC
T ss_pred HHH--HcCCCCEEEECCCC
Confidence 211 01369999999886
No 487
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=33.17 E-value=1.5e+02 Score=27.53 Aligned_cols=82 Identities=13% Similarity=0.116 Sum_probs=52.9
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHH---HHHhhhcccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIK---SVLGQIDENILR 215 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~---~~L~~~~~~l~~ 215 (452)
.|=|.||=-.++.+.+ ..+.+|+.+|++++.++.+.+.+...+. ..+.++..+.++.+ +++++... ..
T Consensus 38 VTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~~~~~--~~ 109 (281)
T 4dry_A 38 VTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTG------NIVRAVVCDVGDPDQVAALFAAVRA--EF 109 (281)
T ss_dssp ETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS------SCEEEEECCTTCHHHHHHHHHHHHH--HH
T ss_pred EeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC------CeEEEEEcCCCCHHHHHHHHHHHHH--Hc
Confidence 5878887666666653 2345799999999988887776655432 13466666666544 34433211 12
Q ss_pred cCccEEEEccCCCc
Q 012954 216 SGVDAILMDLGMSS 229 (452)
Q Consensus 216 ~~VDGILfDLGvSS 229 (452)
..+|.++-+=|+..
T Consensus 110 g~iD~lvnnAG~~~ 123 (281)
T 4dry_A 110 ARLDLLVNNAGSNV 123 (281)
T ss_dssp SCCSEEEECCCCCC
T ss_pred CCCCEEEECCCCCC
Confidence 36999999999753
No 488
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=32.97 E-value=53 Score=30.67 Aligned_cols=84 Identities=13% Similarity=0.099 Sum_probs=54.2
Q ss_pred CCEEEEEccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcch---HHHHHhhh
Q 012954 134 ITSFVDCTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRH---IKSVLGQI 209 (452)
Q Consensus 134 ggiyVDaTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~---i~~~L~~~ 209 (452)
+++++ .|=|+||=-.++.+.+ ..+.+|+.+|++++.++.+.+.+...+ .++.++..+.++ +..++...
T Consensus 33 gk~~l-VTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~Dv~~~~~~~~~~~~~ 104 (275)
T 4imr_A 33 GRTAL-VTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASG-------GTAQELAGDLSEAGAGTDLIERA 104 (275)
T ss_dssp TCEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTT-------CCEEEEECCTTSTTHHHHHHHHH
T ss_pred CCEEE-EECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC-------CeEEEEEecCCCHHHHHHHHHHH
Confidence 44433 5888887666666653 234579999999988877777665543 256666666554 44444433
Q ss_pred cccccccCccEEEEccCCC
Q 012954 210 DENILRSGVDAILMDLGMS 228 (452)
Q Consensus 210 ~~~l~~~~VDGILfDLGvS 228 (452)
.. ...+|.++-+=|+.
T Consensus 105 ~~---~g~iD~lvnnAg~~ 120 (275)
T 4imr_A 105 EA---IAPVDILVINASAQ 120 (275)
T ss_dssp HH---HSCCCEEEECCCCC
T ss_pred HH---hCCCCEEEECCCCC
Confidence 21 14799999998864
No 489
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=32.95 E-value=16 Score=33.28 Aligned_cols=23 Identities=26% Similarity=0.512 Sum_probs=20.4
Q ss_pred HHHHHHHHHhhcCCCeEEEEeec
Q 012954 347 ESSLHACFDCLAPGGRLGVISFH 369 (452)
Q Consensus 347 ~~~L~~a~~~L~pGGRLvVISFH 369 (452)
..+|..+..+|+|||+++|.++.
T Consensus 146 ~~~l~~~~~~L~pgG~l~i~~~~ 168 (273)
T 3bus_A 146 GRALREMARVLRPGGTVAIADFV 168 (273)
T ss_dssp HHHHHHHHTTEEEEEEEEEEEEE
T ss_pred HHHHHHHHHHcCCCeEEEEEEee
Confidence 57888899999999999998875
No 490
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=32.92 E-value=17 Score=33.21 Aligned_cols=24 Identities=29% Similarity=0.369 Sum_probs=20.7
Q ss_pred HHHHHHHHHHhhcCCCeEEEEeec
Q 012954 346 LESSLHACFDCLAPGGRLGVISFH 369 (452)
Q Consensus 346 L~~~L~~a~~~L~pGGRLvVISFH 369 (452)
+..+|..+.++|+|||++++.++.
T Consensus 129 ~~~~l~~~~~~LkpgG~l~~~~~~ 152 (267)
T 3kkz_A 129 FERGLNEWRKYLKKGGYLAVSECS 152 (267)
T ss_dssp HHHHHHHHGGGEEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCCEEEEEEee
Confidence 467899999999999999998764
No 491
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=32.87 E-value=1.4e+02 Score=27.08 Aligned_cols=80 Identities=15% Similarity=0.103 Sum_probs=49.5
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHH-HHHHHHHHhhh-ccCCCCCCceEEEEccCcchHHH---HHhhhcccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSA-LAKARAHLNSL-LHGQAHPHLKTHTFAKNFRHIKS---VLGQIDENI 213 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~A-i~~Ak~rL~~~-~~~~~~~~~r~~li~~nF~~i~~---~L~~~~~~l 213 (452)
.|=|.||=-.++.+.+ .....|+.+|++++. ++.+.+.+... + .++.++..+..+-++ ++.+...
T Consensus 9 VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~v~~~~~~~~~-- 79 (260)
T 1x1t_A 9 VTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHG-------VKVLYDGADLSKGEAVRGLVDNAVR-- 79 (260)
T ss_dssp ETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHT-------SCEEEECCCTTSHHHHHHHHHHHHH--
T ss_pred EeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccC-------CcEEEEECCCCCHHHHHHHHHHHHH--
Confidence 4777777666666653 233469999999877 66655555432 2 156677777665443 3433211
Q ss_pred cccCccEEEEccCCC
Q 012954 214 LRSGVDAILMDLGMS 228 (452)
Q Consensus 214 ~~~~VDGILfDLGvS 228 (452)
...++|.++-+-|+.
T Consensus 80 ~~g~iD~lv~~Ag~~ 94 (260)
T 1x1t_A 80 QMGRIDILVNNAGIQ 94 (260)
T ss_dssp HHSCCSEEEECCCCC
T ss_pred hcCCCCEEEECCCCC
Confidence 013699999998874
No 492
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=32.80 E-value=1.5e+02 Score=23.86 Aligned_cols=56 Identities=18% Similarity=0.174 Sum_probs=37.2
Q ss_pred CCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhcccccccCccEEEEccCCC
Q 012954 158 LKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMS 228 (452)
Q Consensus 158 ~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~l~~~~VDGILfDLGvS 228 (452)
..+|+-+|-|+.....-+..|+..+. .+.. ..+.......+.+ ..+|.||+|+.+.
T Consensus 14 ~~~ILivdd~~~~~~~l~~~L~~~g~-------~v~~-~~~~~~a~~~l~~-------~~~dlvi~D~~l~ 69 (153)
T 3hv2_A 14 RPEILLVDSQEVILQRLQQLLSPLPY-------TLHF-ARDATQALQLLAS-------REVDLVISAAHLP 69 (153)
T ss_dssp CCEEEEECSCHHHHHHHHHHHTTSSC-------EEEE-ESSHHHHHHHHHH-------SCCSEEEEESCCS
T ss_pred CceEEEECCCHHHHHHHHHHhcccCc-------EEEE-ECCHHHHHHHHHc-------CCCCEEEEeCCCC
Confidence 34689999999998888888876532 3432 3344444344432 3699999999764
No 493
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=32.73 E-value=1.5e+02 Score=26.91 Aligned_cols=80 Identities=11% Similarity=-0.003 Sum_probs=50.2
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHH---HHhhhcccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKS---VLGQIDENILR 215 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~---~L~~~~~~l~~ 215 (452)
.|=|.||=-.++.+.+ ....+|+.+|++++.++.+.+.+...+ .++.++..+..+.++ .++..... ..
T Consensus 10 VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~Dv~~~~~v~~~~~~~~~~-~~ 81 (260)
T 2qq5_A 10 VTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLG-------GQCVPVVCDSSQESEVRSLFEQVDRE-QQ 81 (260)
T ss_dssp ESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS-------SEEEEEECCTTSHHHHHHHHHHHHHH-HT
T ss_pred EeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcC-------CceEEEECCCCCHHHHHHHHHHHHHh-cC
Confidence 4777777666666653 233579999999998877766665542 267777777665443 34332100 02
Q ss_pred cCccEEEEccCC
Q 012954 216 SGVDAILMDLGM 227 (452)
Q Consensus 216 ~~VDGILfDLGv 227 (452)
..+|.++-+-|+
T Consensus 82 g~id~lvnnAg~ 93 (260)
T 2qq5_A 82 GRLDVLVNNAYA 93 (260)
T ss_dssp TCCCEEEECCCT
T ss_pred CCceEEEECCcc
Confidence 369999888853
No 494
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=32.70 E-value=1.8e+02 Score=26.60 Aligned_cols=80 Identities=10% Similarity=0.009 Sum_probs=51.5
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeC-CHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHH---Hhhhccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDV-DPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSV---LGQIDENIL 214 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDr-D~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~---L~~~~~~l~ 214 (452)
.|=|.||=-.++.+.+ ..+.+|+.+|+ +++..+...+.++..+ .++.++..+..+..++ +.+... .
T Consensus 34 ITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~v~~~~~~~~~--~ 104 (271)
T 4iin_A 34 ITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKG-------YKAAVIKFDAASESDFIEAIQTIVQ--S 104 (271)
T ss_dssp ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-------CCEEEEECCTTCHHHHHHHHHHHHH--H
T ss_pred EECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC-------CceEEEECCCCCHHHHHHHHHHHHH--h
Confidence 4877777666666653 23346899999 6777666666666543 2677788777665443 333210 1
Q ss_pred ccCccEEEEccCCC
Q 012954 215 RSGVDAILMDLGMS 228 (452)
Q Consensus 215 ~~~VDGILfDLGvS 228 (452)
...+|+++-+=|+.
T Consensus 105 ~g~id~li~nAg~~ 118 (271)
T 4iin_A 105 DGGLSYLVNNAGVV 118 (271)
T ss_dssp HSSCCEEEECCCCC
T ss_pred cCCCCEEEECCCcC
Confidence 13799999999985
No 495
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=32.35 E-value=34 Score=33.50 Aligned_cols=40 Identities=18% Similarity=0.163 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHhhcCCCeEEEEeecch--hHHHHHHHHHh
Q 012954 343 LKTLESSLHACFDCLAPGGRLGVISFHSL--EDRIVKQTFLS 382 (452)
Q Consensus 343 L~~L~~~L~~a~~~L~pGGRLvVISFHSL--EDRIVK~~F~~ 382 (452)
++.+..+|..+.++|+|||.+++.+..|. +....++.+++
T Consensus 248 ~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~~ 289 (332)
T 2igt_A 248 FDHLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMRE 289 (332)
T ss_dssp HHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHHH
Confidence 34567889999999999999777665443 33334444443
No 496
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=32.30 E-value=98 Score=28.11 Aligned_cols=80 Identities=16% Similarity=0.120 Sum_probs=48.0
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHH--HHHHHHHHhhhccCCCCCCceEEEEccCcchHH---HHHhhhcccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSA--LAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIK---SVLGQIDENI 213 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~A--i~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~---~~L~~~~~~l 213 (452)
.|=|.||=-.++.+.+ ....+|+.+|++++. ++...+.++..+ .++.++..+..+.+ ..+.+...
T Consensus 7 VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-------~~~~~~~~Dv~~~~~v~~~~~~~~~-- 77 (258)
T 3a28_C 7 VTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAAD-------QKAVFVGLDVTDKANFDSAIDEAAE-- 77 (258)
T ss_dssp EETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTT-------CCEEEEECCTTCHHHHHHHHHHHHH--
T ss_pred EeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcC-------CcEEEEEccCCCHHHHHHHHHHHHH--
Confidence 3666666555555543 123469999999876 665555555432 25677776766544 33333211
Q ss_pred cccCccEEEEccCCC
Q 012954 214 LRSGVDAILMDLGMS 228 (452)
Q Consensus 214 ~~~~VDGILfDLGvS 228 (452)
....+|.++-+-|+.
T Consensus 78 ~~g~iD~lv~nAg~~ 92 (258)
T 3a28_C 78 KLGGFDVLVNNAGIA 92 (258)
T ss_dssp HHTCCCEEEECCCCC
T ss_pred HhCCCCEEEECCCCC
Confidence 013699999999975
No 497
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=32.28 E-value=1.6e+02 Score=26.21 Aligned_cols=77 Identities=17% Similarity=0.211 Sum_probs=47.6
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceE-EEEccCcchHHHH---Hhhhccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKT-HTFAKNFRHIKSV---LGQIDENIL 214 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~-~li~~nF~~i~~~---L~~~~~~l~ 214 (452)
.|=|.||=-.++.+.+ .....|+++|++++.++...+.+. . ++ .++..+..+.+.+ +.+...
T Consensus 16 ITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~-------~~~~~~~~D~~~~~~~~~~~~~~~~--- 82 (254)
T 2wsb_A 16 VTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELG---A-------AVAARIVADVTDAEAMTAAAAEAEA--- 82 (254)
T ss_dssp EETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG---G-------GEEEEEECCTTCHHHHHHHHHHHHH---
T ss_pred EECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---c-------cceeEEEEecCCHHHHHHHHHHHHh---
Confidence 5777777666666553 223479999999987766554441 1 34 5666666654433 332210
Q ss_pred ccCccEEEEccCCCc
Q 012954 215 RSGVDAILMDLGMSS 229 (452)
Q Consensus 215 ~~~VDGILfDLGvSS 229 (452)
...+|.++-+-|+..
T Consensus 83 ~~~id~li~~Ag~~~ 97 (254)
T 2wsb_A 83 VAPVSILVNSAGIAR 97 (254)
T ss_dssp HSCCCEEEECCCCCC
T ss_pred hCCCcEEEECCccCC
Confidence 136999999999754
No 498
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=32.26 E-value=1.8e+02 Score=26.77 Aligned_cols=81 Identities=11% Similarity=0.055 Sum_probs=51.9
Q ss_pred EccCCChhHHHHHHhC-CCCCEEEEEeC-CHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHH---HHhhhccccc
Q 012954 140 CTLGAAGHSSAIIRAH-PELKLHIGVDV-DPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKS---VLGQIDENIL 214 (452)
Q Consensus 140 aTlG~GGHS~aIL~~~-p~~g~VigfDr-D~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~---~L~~~~~~l~ 214 (452)
.|=|.||=-.++.+.+ ..+.+|+..|+ +.+..+...+.++..+. ++.++..+..+.++ ++.+... .
T Consensus 33 VTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~D~~d~~~v~~~~~~~~~--~ 103 (269)
T 4dmm_A 33 VTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGG-------EAFAVKADVSQESEVEALFAAVIE--R 103 (269)
T ss_dssp ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-------CEEEEECCTTSHHHHHHHHHHHHH--H
T ss_pred EECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCC-------cEEEEECCCCCHHHHHHHHHHHHH--H
Confidence 4777777666666653 23346888888 77777777666665432 57777777766543 3333211 1
Q ss_pred ccCccEEEEccCCCc
Q 012954 215 RSGVDAILMDLGMSS 229 (452)
Q Consensus 215 ~~~VDGILfDLGvSS 229 (452)
...+|+++-+=|++.
T Consensus 104 ~g~id~lv~nAg~~~ 118 (269)
T 4dmm_A 104 WGRLDVLVNNAGITR 118 (269)
T ss_dssp HSCCCEEEECCCCCC
T ss_pred cCCCCEEEECCCCCC
Confidence 236999999998763
No 499
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=32.14 E-value=1.2e+02 Score=23.75 Aligned_cols=55 Identities=18% Similarity=0.233 Sum_probs=35.9
Q ss_pred CEEEEEeCCHHHHHHHHHHHhhhccCCCCCCceEEEEccCcchHHHHHhhhcccccccCccEEEEccCCC
Q 012954 159 KLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMS 228 (452)
Q Consensus 159 g~VigfDrD~~Ai~~Ak~rL~~~~~~~~~~~~r~~li~~nF~~i~~~L~~~~~~l~~~~VDGILfDLGvS 228 (452)
.+|+-+|-|+...+.-+..|+..+. .+. ...+..+..+.+.+ ..+|.||+|+...
T Consensus 4 ~~ilivdd~~~~~~~l~~~L~~~g~-------~v~-~~~~~~~a~~~l~~-------~~~dlvi~d~~~~ 58 (140)
T 2qr3_A 4 GTIIIVDDNKGVLTAVQLLLKNHFS-------KVI-TLSSPVSLSTVLRE-------ENPEVVLLDMNFT 58 (140)
T ss_dssp CEEEEECSCHHHHHHHHHHHTTTSS-------EEE-EECCHHHHHHHHHH-------SCEEEEEEETTTT
T ss_pred ceEEEEeCCHHHHHHHHHHHHhCCc-------EEE-EeCCHHHHHHHHHc-------CCCCEEEEeCCcC
Confidence 3588899999988888887876532 343 23344444334432 3699999998763
No 500
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=32.10 E-value=1.5e+02 Score=23.13 Aligned_cols=55 Identities=16% Similarity=0.084 Sum_probs=36.9
Q ss_pred CEEEEEeCCHHHHHHHHHHHhh-hccCCCCCCce-EEEEccCcchHHHHHhhhcccccccCccEEEEccCCC
Q 012954 159 KLHIGVDVDPSALAKARAHLNS-LLHGQAHPHLK-THTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMS 228 (452)
Q Consensus 159 g~VigfDrD~~Ai~~Ak~rL~~-~~~~~~~~~~r-~~li~~nF~~i~~~L~~~~~~l~~~~VDGILfDLGvS 228 (452)
.+|+-+|-|+.....-+..|+. .+. . +. ...+..+....+.. ..+|.||+|+...
T Consensus 9 ~~iLivdd~~~~~~~l~~~L~~~~~~-------~~v~-~~~~~~~a~~~l~~-------~~~dlii~d~~l~ 65 (143)
T 3cnb_A 9 FSILIIEDDKEFADMLTQFLENLFPY-------AKIK-IAYNPFDAGDLLHT-------VKPDVVMLDLMMV 65 (143)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHHCTT-------CEEE-EECSHHHHHHHHHH-------TCCSEEEEETTCT
T ss_pred ceEEEEECCHHHHHHHHHHHHhccCc-------cEEE-EECCHHHHHHHHHh-------cCCCEEEEecccC
Confidence 4688999999999888888876 332 3 33 33444444444433 3699999998764
Done!