Query 012960
Match_columns 452
No_of_seqs 404 out of 2031
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 19:33:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012960.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012960hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tnx_A Papain; hydrolase, cyto 100.0 9E-84 3.1E-88 649.1 33.7 304 22-344 59-362 (363)
2 1pci_A Procaricain; zymogen, h 100.0 6.2E-82 2.1E-86 630.0 32.3 307 22-344 15-321 (322)
3 3qj3_A Cathepsin L-like protei 100.0 1.5E-81 5.1E-86 629.1 31.7 308 18-344 11-331 (331)
4 1by8_A Protein (procathepsin K 100.0 1.2E-80 4.1E-85 619.0 31.2 304 23-344 5-314 (314)
5 2c0y_A Procathepsin S; proenzy 100.0 9.5E-81 3.2E-85 620.0 29.9 304 22-344 5-315 (315)
6 3qt4_A Cathepsin-L-like midgut 100.0 9.9E-81 3.4E-85 621.9 30.1 302 22-344 20-329 (329)
7 1cs8_A Human procathepsin L; p 100.0 9.3E-80 3.2E-84 613.1 29.9 300 23-344 6-316 (316)
8 2o6x_A Procathepsin L1, secret 100.0 6E-79 2.1E-83 605.8 28.7 297 27-345 3-307 (310)
9 1xkg_A DER P I, major mite fec 100.0 3.4E-75 1.2E-79 578.3 28.0 287 28-345 7-303 (312)
10 3pdf_A Cathepsin C, dipeptidyl 100.0 1.2E-68 4E-73 552.3 24.0 280 44-344 135-435 (441)
11 3hhi_A Cathepsin B-like cystei 100.0 4E-68 1.4E-72 530.7 18.4 291 47-347 2-315 (325)
12 1cqd_A Protein (protease II); 100.0 1.4E-64 4.9E-69 480.2 24.7 219 116-347 2-220 (221)
13 3p5u_A Actinidin; SAD, cystein 100.0 1.8E-64 6.1E-69 479.4 23.8 217 117-345 1-218 (220)
14 1s4v_A Cysteine endopeptidase; 100.0 3.3E-64 1.1E-68 480.1 24.4 223 116-349 1-224 (229)
15 2fo5_A Cysteine proteinase EP- 100.0 3.2E-64 1.1E-68 488.2 23.2 226 115-349 2-229 (262)
16 1ppo_A Protease omega; hydrola 100.0 7.5E-64 2.6E-68 473.6 24.6 215 117-344 1-215 (216)
17 1iwd_A Ervatamin B; cysteine p 100.0 8.4E-64 2.9E-68 472.9 24.4 214 117-344 1-214 (215)
18 1yal_A Chymopapain; hydrolase, 100.0 1.3E-63 4.4E-68 472.7 24.8 216 117-345 1-216 (218)
19 3pbh_A Procathepsin B; thiol p 100.0 5.3E-64 1.8E-68 499.9 21.3 273 56-343 11-313 (317)
20 3u8e_A Papain-like cysteine pr 100.0 2E-63 6.7E-68 472.8 21.2 214 117-345 1-220 (222)
21 2b1m_A SPE31; papain-like, sug 100.0 8.4E-63 2.9E-67 475.0 24.2 221 116-351 1-231 (246)
22 3kwz_A Cathepsin K; enzyme inh 100.0 1.5E-62 5.2E-67 464.5 24.5 212 117-344 1-215 (215)
23 2cio_A Papain; hydrolase/inhib 100.0 1.7E-62 5.7E-67 463.1 23.8 211 117-344 1-211 (212)
24 2bdz_A Mexicain; cysteine prot 100.0 2.3E-62 7.8E-67 462.8 23.8 212 117-345 1-212 (214)
25 3ioq_A CMS1MS2; caricaceae, cy 100.0 2E-62 6.9E-67 463.0 22.5 211 117-344 1-211 (213)
26 3ovx_A Cathepsin S; hydrolase, 100.0 2.6E-62 8.9E-67 463.9 22.6 213 117-344 2-218 (218)
27 1o0e_A Ervatamin C; plant cyst 100.0 5.6E-62 1.9E-66 458.1 23.1 207 117-344 1-207 (208)
28 3f75_A Toxopain-2, cathepsin L 100.0 1.9E-62 6.4E-67 466.7 19.6 217 115-344 5-224 (224)
29 2xu3_A Cathepsin L1; hydrolase 100.0 8.9E-62 3E-66 460.8 24.0 212 117-344 1-220 (220)
30 2oul_A Falcipain 2; cysteine p 100.0 6.2E-62 2.1E-66 467.9 22.8 215 114-344 15-240 (241)
31 3bwk_A Cysteine protease falci 100.0 9E-62 3.1E-66 467.3 22.5 215 114-344 17-242 (243)
32 8pch_A Cathepsin H; hydrolase, 100.0 1.9E-61 6.4E-66 458.6 21.8 212 117-345 1-219 (220)
33 1m6d_A Cathepsin F, catsf; pap 100.0 3.9E-61 1.3E-65 454.5 23.1 208 117-344 1-213 (214)
34 3i06_A Cruzipain; autocatalyti 100.0 5.1E-61 1.7E-65 454.0 23.5 208 117-344 1-214 (215)
35 3f5v_A DER P 1 allergen; aller 100.0 1.2E-60 4.2E-65 453.6 20.5 211 114-344 7-222 (222)
36 3cbj_A Cathepsin B; cathepsin 100.0 7.5E-57 2.6E-61 438.7 20.7 224 115-346 5-259 (266)
37 3qsd_A Cathepsin B-like peptid 100.0 1.5E-56 5.2E-61 433.7 20.6 220 116-343 2-252 (254)
38 1deu_A Procathepsin X; cystein 100.0 8.9E-56 3E-60 433.1 22.2 225 114-344 33-275 (277)
39 2wbf_X Serine-repeat antigen p 100.0 3.6E-51 1.2E-55 398.6 20.9 221 120-345 10-262 (265)
40 3ois_A Cysteine protease; alph 100.0 2.3E-49 8E-54 390.6 15.1 244 70-326 13-273 (291)
41 2cb5_A Protein (bleomycin hydr 100.0 1.7E-38 5.9E-43 325.7 18.7 207 116-325 47-412 (453)
42 2e01_A Cysteine proteinase 1; 100.0 7.3E-38 2.5E-42 321.4 19.0 217 116-343 52-423 (457)
43 3pw3_A Aminopeptidase C; bleom 100.0 1.5E-33 5.2E-38 283.4 16.1 192 128-325 21-356 (383)
44 2jye_A Granulin A; epithelin, 99.9 5.9E-26 2E-30 171.5 3.8 60 356-421 2-61 (72)
45 2jyv_A Granulin-2, granulin F; 99.9 1.6E-24 5.3E-29 163.7 1.2 60 358-424 4-64 (72)
46 2jyt_A Granulin-5, granulin C; 99.9 1.2E-23 4E-28 157.4 3.7 58 357-421 2-59 (69)
47 3f75_P Toxopain-2, cathepsin L 99.8 2.1E-18 7.2E-23 143.1 9.3 74 22-96 18-91 (106)
48 2l95_A Crammer, LP06209P; cyst 99.7 1.2E-17 4.1E-22 132.3 6.2 67 26-94 7-76 (80)
49 1fwo_A Oryzain beta chain; bet 99.5 1.6E-14 5.5E-19 93.4 2.5 34 358-391 2-35 (35)
50 1g26_A Granulin A, HGA; granul 99.1 7.4E-12 2.5E-16 79.2 0.5 31 357-392 1-31 (31)
51 1i8x_A Granulin-1; two beta-ha 99.0 3.1E-11 1.1E-15 75.3 1.0 29 358-391 2-30 (30)
52 1pxv_A Cysteine protease; hydr 97.0 0.011 3.8E-07 52.2 12.5 128 134-325 26-162 (183)
53 1x9y_A Cysteine proteinase; ha 96.7 0.033 1.1E-06 54.3 15.0 120 133-311 201-329 (367)
54 1cv8_A Staphopain; cysteine pr 96.4 0.094 3.2E-06 46.2 14.1 118 134-311 17-144 (174)
55 3erv_A Putative C39-like pepti 87.6 1.3 4.4E-05 41.3 7.5 64 240-310 125-196 (236)
56 3bb7_A Interpain A; cysteine p 51.4 23 0.00079 34.3 6.2 58 248-323 239-297 (321)
57 4d8b_A Streptopain; papain fol 51.3 21 0.00071 33.6 5.7 52 248-324 172-226 (261)
58 1dki_A Pyrogenic exotoxin B zy 50.8 26 0.00089 34.7 6.6 53 248-323 290-343 (371)
59 2jmv_A Scytovirin; protein, su 42.9 24 0.00081 26.6 3.6 9 381-389 79-87 (95)
60 1omc_A Omega-conotoxin GVIA; p 40.8 13 0.00043 22.3 1.5 20 396-418 8-27 (28)
61 1ntx_A Alpha-neurotoxin; NMR { 34.0 9.8 0.00034 27.3 0.3 26 381-411 33-59 (60)
62 2vwa_A Putative uncharacterize 33.3 19 0.00066 27.8 1.9 28 46-86 20-47 (101)
63 1ug4_A Cytotoxin 6, cardiotoxi 30.9 19 0.00065 25.7 1.4 47 360-411 8-60 (60)
64 1mr6_A Neurotoxin; venom; NMR 28.6 50 0.0017 23.9 3.5 47 360-411 11-67 (68)
65 2e4u_A Metabotropic glutamate 27.4 32 0.0011 35.4 3.1 50 356-421 481-542 (555)
66 1cvo_A Cardiotoxin V; cytotoxi 27.2 28 0.00097 24.8 1.8 47 360-411 9-62 (62)
67 2h7z_B Irditoxin subunit B; th 26.1 45 0.0015 25.0 2.8 49 359-412 20-76 (77)
68 1p1p_A AA-conotoxin PIVA; neur 25.6 42 0.0014 19.3 1.9 10 386-395 1-11 (26)
69 1vyc_A Bucain, neurotoxin; sna 25.3 60 0.002 23.4 3.3 47 360-411 11-64 (65)
70 2h5f_A Denmotoxin; three-finge 24.0 31 0.0011 25.9 1.6 49 359-412 20-76 (77)
71 1qk7_A Selenocosmia huwena lec 21.2 42 0.0014 20.8 1.5 20 397-418 8-27 (32)
72 1lsi_A LSIII; venom, multigene 20.8 43 0.0015 24.2 1.8 45 363-412 10-64 (66)
73 1ziv_A Calpain 9; cysteine pro 20.2 1.1E+02 0.0037 29.7 5.0 28 285-312 243-274 (339)
No 1
>3tnx_A Papain; hydrolase, cytoplasm for recombinant expression; 2.62A {Carica papaya}
Probab=100.00 E-value=9e-84 Score=649.12 Aligned_cols=304 Identities=43% Similarity=0.782 Sum_probs=268.9
Q ss_pred chhHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhccCCCCceEEecccCCccchHHhhhhhcCcCCCccccc
Q 012960 22 CSDINELFETWCKQHGKAYSSEQEKQQRLKIFEDNYAFVTQHNNMGNSSFTLSLNAFADLTHQEFKASFLGFSAASIDHD 101 (452)
Q Consensus 22 ~~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~s~~lg~N~fsDlt~eEf~~~~l~~~~~~~~~~ 101 (452)
++.+.++|++||++|+|+|.+.+|+.+|+.||++|+++|++||++ +.+|++|+|+|+|||.|||++++++.........
T Consensus 59 ~~~~~~lf~~f~~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~~N~~-~~sy~~g~N~FaDlT~eEf~~~~~~~~~~~~~~~ 137 (363)
T 3tnx_A 59 TERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKK-NNSYWLGLNVFADMSNDEFKEKYTGSIAGNYTTT 137 (363)
T ss_dssp HHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHTTS-CCSEEECSCTTTTSCHHHHHHHHSCSSCSCCCCS
T ss_pred HHHHHHHHHHHHHHcCCcCCCHHHHHHHHHHHHHHHHHHHHHHcC-CCCeEEeccccccCCHHHHHHHhccccccccccc
Confidence 667889999999999999999999999999999999999999998 8899999999999999999999988665432211
Q ss_pred ccCCccccCCCCCCCCCCeeecCCCCCcccccCCCCCcchHHHHHHHHHHHHHHHHhCCccccChHHHhhhcCCCCCCCC
Q 012960 102 RRRNASVQSPGNLRDVPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCG 181 (452)
Q Consensus 102 ~~~~~~~~~~~~~~~lP~s~Dwr~~g~vtpVkdQg~cGsCWAfA~~~alE~~~~~~~~~~~~lS~q~lvdc~~~~~~gC~ 181 (452)
........ .....+||++||||++|+||||||||.||||||||++++||++++++++.++.||||+|+||+. .+.||+
T Consensus 138 ~~~~~~~~-~~~~~~lP~s~DWR~~g~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~LSeQ~LvdC~~-~~~GC~ 215 (363)
T 3tnx_A 138 ELSYEEVL-NDGDVNIPEYVDWRQKGAVTPVKNQGSCGSAWAFSAVSTIESIIKIRTGNLNEYSEQELLDCDR-RSYGCN 215 (363)
T ss_dssp SSSSSCCC-CCSCCCCCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTB
T ss_pred cccccccc-CcccCCCCcceecccCCCCCCCccCCcCCchhhhhhcccHHHHHHHHcCCCCCcCHHHHhcccC-CCCCCC
Confidence 11111111 2234579999999999999999999999999999999999999999999999999999999987 478999
Q ss_pred CCchHHHHHHHHHhCCcCCCCCCCCCCCCCCccccccccchhhhhhccccceEEeeeeEecCCChHHHHHHHHHcCCeEE
Q 012960 182 GGLMDYAYQFVIKNHGIDTEKDYPYRGQAGQCNKQKVLHFLTSFVLQLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSV 261 (452)
Q Consensus 182 GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~lk~al~~gPV~v 261 (452)
||++..|++|+.+ .||++|++|||.+.++.|.... ......++.++..++..++.+|+.+|++|||+|
T Consensus 216 GG~~~~a~~yi~~-~Gi~~e~~yPY~~~~~~c~~~~-----------~~~~~~~~~~~~~~~~~~e~~l~~~v~~gPvsv 283 (363)
T 3tnx_A 216 GGYPWSALQLVAQ-YGIHYRNTYPYEGVQRYCRSRE-----------KGPYAAKTDGVRQVQPYNEGALLYSIANQPVSV 283 (363)
T ss_dssp CCCHHHHHHHHHH-TCBCBTTTSCCCSSCCCCCGGG-----------GCSCSBCCCEEEEECSSCHHHHHHHHTTSCEEE
T ss_pred CCChHHHHhHHHh-cCccccccCCCcCcCCCcccCC-----------CCCceeeccceEEcchhhHHHHHHHHHcCCcEE
Confidence 9999999999865 5999999999999888776544 233345677788888889999999999999999
Q ss_pred EEEcCchhhhccCCceEeCCCCCCCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCCCcccccccccc
Q 012960 262 GICGSERAFQLYSSGIFTGPCSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASY 341 (452)
Q Consensus 262 ~i~~~~~~f~~Y~sGiy~~~~~~~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~ 341 (452)
+|++...+|++|++|||+.+|++.+||||+|||||+ +|||||||||++|||+|||||+||.++..|+|||++.|+|
T Consensus 284 ai~a~~~~F~~Y~sGVy~~~~~~~lnHaV~iVGyG~----~YWIVKNSWGt~WGe~GY~rI~Rg~~~~~~~CGI~~~a~y 359 (363)
T 3tnx_A 284 VLEAAGKDFQLYRGGIFVGPCGNKVDHAVAAVGYGP----NYILIRNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFY 359 (363)
T ss_dssp EECCCSHHHHTEEEEEECCCCCSCCCEEEEEEEEET----TEEEEECSBCTTSTBTTEEEEECCSCCSSCGGGTTSCEEE
T ss_pred EEEecchhhhCCCCCEECCCCCCCCCeEEEEEEcCC----CcEEEEeCCCCccccCcEEEEEcCCCCCCCcCCccceeee
Confidence 999887899999999999889888999999999986 5999999999999999999999999888899999999999
Q ss_pred ccc
Q 012960 342 PTK 344 (452)
Q Consensus 342 p~~ 344 (452)
|++
T Consensus 360 Pik 362 (363)
T 3tnx_A 360 PVK 362 (363)
T ss_dssp EEC
T ss_pred ccc
Confidence 985
No 2
>1pci_A Procaricain; zymogen, hydrolase, thiol protease; 3.20A {Carica papaya} SCOP: d.3.1.1
Probab=100.00 E-value=6.2e-82 Score=630.04 Aligned_cols=307 Identities=45% Similarity=0.852 Sum_probs=270.4
Q ss_pred chhHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhccCCCCceEEecccCCccchHHhhhhhcCcCCCccccc
Q 012960 22 CSDINELFETWCKQHGKAYSSEQEKQQRLKIFEDNYAFVTQHNNMGNSSFTLSLNAFADLTHQEFKASFLGFSAASIDHD 101 (452)
Q Consensus 22 ~~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~s~~lg~N~fsDlt~eEf~~~~l~~~~~~~~~~ 101 (452)
+.++..+|++||++|+|.|.+.+|+.+|+.||++|+++|++||++ +.+|++|+|+|+|||.|||++++++.........
T Consensus 15 e~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~-~~~~~~g~N~FaDlt~eEf~~~~~g~~~~~~~~~ 93 (322)
T 1pci_A 15 TERLIQLFNSWMLNHNKFYENVDEKLYRFEIFKDNLNYIDETNKK-NNSYWLGLNEFADLSNDEFNEKYVGSLIDATIEQ 93 (322)
T ss_dssp HHHHHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHHHHHTT-CCSEEECSCTTTTSCHHHHHHHHCCCBCCCSSCC
T ss_pred hHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhhcc-CCceEEecCccccCCHHHHHHHhcCCCCcccccc
Confidence 566788999999999999998899999999999999999999997 7899999999999999999998887654322110
Q ss_pred ccCCccccCCCCCCCCCCeeecCCCCCcccccCCCCCcchHHHHHHHHHHHHHHHHhCCccccChHHHhhhcCCCCCCCC
Q 012960 102 RRRNASVQSPGNLRDVPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCG 181 (452)
Q Consensus 102 ~~~~~~~~~~~~~~~lP~s~Dwr~~g~vtpVkdQg~cGsCWAfA~~~alE~~~~~~~~~~~~lS~q~lvdc~~~~~~gC~ 181 (452)
. ....+. .....+||++||||++|+|+||||||.||||||||++++||++++|+++..++||+|+|+||+. .+.||+
T Consensus 94 ~-~~~~~~-~~~~~~lP~~~DwR~~g~vt~VkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~lSeq~lvdC~~-~~~gC~ 170 (322)
T 1pci_A 94 S-YDEEFI-NEDIVNLPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCER-RSHGCK 170 (322)
T ss_dssp C-CSEECC-CCCCCCSCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHSCT-TSCGGG
T ss_pred c-cccccc-cccccCCCCeEecccCCCCCCccccccCCccHHHHHHHHHHHHHHHHcCCccccCHHHHHhhcC-CCCCCC
Confidence 1 001111 1223579999999999999999999999999999999999999999999999999999999996 588999
Q ss_pred CCchHHHHHHHHHhCCcCCCCCCCCCCCCCCccccccccchhhhhhccccceEEeeeeEecCCChHHHHHHHHHcCCeEE
Q 012960 182 GGLMDYAYQFVIKNHGIDTEKDYPYRGQAGQCNKQKVLHFLTSFVLQLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSV 261 (452)
Q Consensus 182 GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~lk~al~~gPV~v 261 (452)
||++..|++|+.++ ||++|++|||.+.++.|.... .....++|.+|..++.+++++|+++|++|||+|
T Consensus 171 GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~~~~-----------~~~~~~~i~~~~~v~~~~e~~l~~~l~~GPV~v 238 (322)
T 1pci_A 171 GGYPPYALEYVAKN-GIHLRSKYPYKAKQGTCRAKQ-----------VGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSV 238 (322)
T ss_dssp CBCHHHHHHHHHHH-CBCBTTTSCCCSSCCCCTTTT-----------CCSCCBCCCCEEECCSSBHHHHHHHHHHSCEEE
T ss_pred CCCHHHHHHHHHHh-CCCchhhCCCCCCCCCCCCCC-----------CCCceEEEeeEEEeCCCcHHHHHHHHHHCCEEE
Confidence 99999999999876 799999999999999998653 122346788999998888999999999999999
Q ss_pred EEEcCchhhhccCCceEeCCCCCCCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCCCcccccccccc
Q 012960 262 GICGSERAFQLYSSGIFTGPCSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASY 341 (452)
Q Consensus 262 ~i~~~~~~f~~Y~sGiy~~~~~~~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~ 341 (452)
+|+++..+|++|++|||+++|++.++|||+|||||+++|++|||||||||++|||+|||||+|+.+...|+|||++.++|
T Consensus 239 ~i~~~~~~f~~Y~~Gvy~~~c~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~n~CgI~~~~~y 318 (322)
T 1pci_A 239 VVESKGRPFQLYKGGIFEGPCGTKVDGAVTAVGYGKSGGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYY 318 (322)
T ss_dssp EECTTCHHHHTEEEEEECCSCCSCCCEEEEEEEEEEETTEEEEEEECSBCSSSTBTTEEEEECCCSBSSCGGGGGGCCEE
T ss_pred EEecccccccccCCeEeCCCCCCCCCEEEEEEEEeccCCccEEEEEeCCCCcccCCeEEEEEcCCCCCCCcCCcccceeE
Confidence 99997679999999999888888889999999999999999999999999999999999999997555579999999999
Q ss_pred ccc
Q 012960 342 PTK 344 (452)
Q Consensus 342 p~~ 344 (452)
|++
T Consensus 319 p~~ 321 (322)
T 1pci_A 319 PTK 321 (322)
T ss_dssp ECC
T ss_pred EEe
Confidence 986
No 3
>3qj3_A Cathepsin L-like protein; hydrolase, proteinase, larVal midgut; 1.85A {Tenebrio molitor} SCOP: d.3.1.0
Probab=100.00 E-value=1.5e-81 Score=629.12 Aligned_cols=308 Identities=38% Similarity=0.711 Sum_probs=269.2
Q ss_pred CCCCchhHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhccC---CCCceEEecccCCccchHHhhhhhcCcC
Q 012960 18 PLNYCSDINELFETWCKQHGKAYSSEQEKQQRLKIFEDNYAFVTQHNNM---GNSSFTLSLNAFADLTHQEFKASFLGFS 94 (452)
Q Consensus 18 ~~~~~~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~~N~~---~~~s~~lg~N~fsDlt~eEf~~~~l~~~ 94 (452)
+.-.+..+..+|++||++|+|+|.+.+|+.+|+.||++|+++|++||++ ++.+|+||+|+|+|||.|||++++++..
T Consensus 11 ~~~~~~~l~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~~~~~~~ 90 (331)
T 3qj3_A 11 SALPSTFVAEKWENFKTTYARSYVNAKEETFRKQIFQKKLETFEEHNEKYRQGLVSYTLGVNLFTDMTPEEMKAYTHGLI 90 (331)
T ss_dssp --CCHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSEEECCSTTTTCCHHHHHHHHSCCC
T ss_pred CCCCCHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCCceeecccccccCCHHHHHHHhcccc
Confidence 3344778889999999999999999899999999999999999999985 5789999999999999999999988765
Q ss_pred CCcccccccCCccccCC-----CCCCCCCCeeecCCCCCcccccCCCCCcchHHHHHHHHHHHHHHHHhCC--ccccChH
Q 012960 95 AASIDHDRRRNASVQSP-----GNLRDVPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGS--LVSLSEQ 167 (452)
Q Consensus 95 ~~~~~~~~~~~~~~~~~-----~~~~~lP~s~Dwr~~g~vtpVkdQg~cGsCWAfA~~~alE~~~~~~~~~--~~~lS~q 167 (452)
.+..... ....+... ....+||++||||++|+||||||||.||||||||++++||++++++++. .++||+|
T Consensus 91 ~~~~~~~--~~~~~~~~~~~~~~~~~~lP~s~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~~~LSeQ 168 (331)
T 3qj3_A 91 MPADLHK--NGIPIKTREDLGLNASVRYPASFDWRDQGMVSPVKNQGSCGSSWAFSSTGAIESQMKIANGAGYDSSVSEQ 168 (331)
T ss_dssp CCSSTTT--TCEEECSGGGGTCCSSCCCCSSEEGGGGTCSCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCTTSCCCBCHH
T ss_pred ccccccc--cCcccccccccccccccCCCcceecccCCccCCCccCcccchhhHHHHHHHHHHHHHHHhCCCcccCcCHH
Confidence 4321110 01111101 0234799999999999999999999999999999999999999999998 8999999
Q ss_pred HHhhhcCCCCCCCCCCchHHHHHHHHHhCCcCCCCCCCCCCCCCCccccccccchhhhhhccccceEEeeeeEecCCChH
Q 012960 168 ELIDCDRSYNSGCGGGLMDYAYQFVIKNHGIDTEKDYPYRGQAGQCNKQKVLHFLTSFVLQLNRHIVTIDGYKDVPENNE 247 (452)
Q Consensus 168 ~lvdc~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~ 247 (452)
+|+||+.. +.||+||++..|++|+.+++||++|++|||.+.++.|.... ....++|.+|..++..++
T Consensus 169 ~LvdC~~~-~~GC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~------------~~~~~~i~~~~~v~~~~e 235 (331)
T 3qj3_A 169 QLVDCVPN-ALGCSGGWMNDAFTYVAQNGGIDSEGAYPYEMADGNCHYDP------------NQVAARLSGYVYLSGPDE 235 (331)
T ss_dssp HHHHHCTT-SCGGGCCCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCCT------------TSEEECCSEEEEESSCCH
T ss_pred HHhhhccC-CCCCCCCCHHHHHHHHHHcCCcCcccccCccCCCCCCCCCc------------ccceeEeeEEEEeCCCCH
Confidence 99999974 88999999999999998888999999999999999998664 345678899999988889
Q ss_pred HHHHHHHHc-CCeEEEEEcCchhhhccCCceEeC-CCC-CCCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEe
Q 012960 248 KQLLQAVVA-QPVSVGICGSERAFQLYSSGIFTG-PCS-TSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQR 324 (452)
Q Consensus 248 ~~lk~al~~-gPV~v~i~~~~~~f~~Y~sGiy~~-~~~-~~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r 324 (452)
++||++|++ |||+|+|++... |++|++|||.. .|. ..++|||+|||||+++|++|||||||||++|||+|||||+|
T Consensus 236 ~~lk~al~~~GPV~v~i~a~~~-f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r 314 (331)
T 3qj3_A 236 NMLADMVATKGPVAVAFDADDP-FGSYSGGVYYNPTCETNKFTHAVLIVGYGNENGQDYWLVKNSWGDGWGLDGYFKIAR 314 (331)
T ss_dssp HHHHHHHHHHCCEEEEECCCTT-GGGEEEEEECCTTCCSSCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEEC
T ss_pred HHHHHHHHhCCCEEEEEEcccc-cccccCceEeCCCCCCCcCCEEEEEEEEeccCCceEEEEEcCCCCCcCCCCEEEEEc
Confidence 999999986 999999999854 99999999965 575 57899999999999999999999999999999999999999
Q ss_pred cCCCCCCccccccccccccc
Q 012960 325 NTGNSLGICGINMLASYPTK 344 (452)
Q Consensus 325 ~~~~~~~~CgI~~~~~~p~~ 344 (452)
+.+ |+|||++.++||++
T Consensus 315 ~~~---n~CgI~~~~~~p~v 331 (331)
T 3qj3_A 315 NAN---NHCGIAGVASVPTL 331 (331)
T ss_dssp SSS---SGGGTTTSCEEEEC
T ss_pred CCC---CccCcCCceeeeeC
Confidence 873 49999999999974
No 4
>1by8_A Protein (procathepsin K); hydrolase(sulfhydryl proteinase), papain; 2.60A {Homo sapiens} SCOP: d.3.1.1 PDB: 7pck_A
Probab=100.00 E-value=1.2e-80 Score=619.02 Aligned_cols=304 Identities=43% Similarity=0.787 Sum_probs=264.5
Q ss_pred hhHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhccC---CCCceEEecccCCccchHHhhhhhcCcCCCccc
Q 012960 23 SDINELFETWCKQHGKAYSSEQEKQQRLKIFEDNYAFVTQHNNM---GNSSFTLSLNAFADLTHQEFKASFLGFSAASID 99 (452)
Q Consensus 23 ~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~~N~~---~~~s~~lg~N~fsDlt~eEf~~~~l~~~~~~~~ 99 (452)
.++..+|++||++|+|+|.+.+|+.+|+.||++|+++|++||++ ++.+|++|+|+|+|||.|||++.+++.......
T Consensus 5 ~~~~~~f~~~~~~~~k~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~FaDlt~eEf~~~~~g~~~~~~~ 84 (314)
T 1by8_A 5 EILDTHWELWKKTHRKQYNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPLSH 84 (314)
T ss_dssp CTHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSEEECCCTTSSSCHHHHHHHSCCCCCCSCC
T ss_pred HHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEEcccccccCCHHHHHHHhccCCCCccc
Confidence 35778999999999999998899999999999999999999975 357999999999999999999888876543221
Q ss_pred ccccCCccccCCCCCCCCCCeeecCCCCCcccccCCCCCcchHHHHHHHHHHHHHHHHhCCccccChHHHhhhcCCCCCC
Q 012960 100 HDRRRNASVQSPGNLRDVPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSG 179 (452)
Q Consensus 100 ~~~~~~~~~~~~~~~~~lP~s~Dwr~~g~vtpVkdQg~cGsCWAfA~~~alE~~~~~~~~~~~~lS~q~lvdc~~~~~~g 179 (452)
. . ....+........||++||||++|+|+||||||.||||||||++++||++++|+++..++||||+|+||+. .+.|
T Consensus 85 ~-~-~~~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFs~~~alE~~~~i~~g~~~~LSeq~lvdC~~-~~~g 161 (314)
T 1by8_A 85 S-R-SNDTLYIPEWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS-ENDG 161 (314)
T ss_dssp C-C-SSSSSBCCCCSSCCCSCCBSTTTTCSCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHTTCT-TSCG
T ss_pred c-c-CCccccccccccCCCCeEeCCCCCCCCCcccCCCCCCcHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcC-CCCC
Confidence 1 0 10112111112239999999999999999999999999999999999999999999999999999999996 5899
Q ss_pred CCCCchHHHHHHHHHhCCcCCCCCCCCCCCCCCccccccccchhhhhhccccceEEeeeeEecCCChHHHHHHHHHc-CC
Q 012960 180 CGGGLMDYAYQFVIKNHGIDTEKDYPYRGQAGQCNKQKVLHFLTSFVLQLNRHIVTIDGYKDVPENNEKQLLQAVVA-QP 258 (452)
Q Consensus 180 C~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~lk~al~~-gP 258 (452)
|+||++..|++|+.+++||++|++|||.+.++.|.... ....++|.+|..++..++++||++|++ ||
T Consensus 162 C~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~------------~~~~~~i~~~~~v~~~~~~~i~~al~~~GP 229 (314)
T 1by8_A 162 CGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNP------------TGKAAKCRGYREIPEGNEKALKRAVARVGP 229 (314)
T ss_dssp GGCCCSHHHHHHHHHTTCBCBTTTSCCCSSCCCCCCCG------------GGCCBCCSCEEECCSSCHHHHHHHHHHHCC
T ss_pred CcCCCHHHHHHHHHHcCCcCcHhhCCCCCCCCCcCCCC------------ccceeEECcEEEecCCCHHHHHHHHHHcCC
Confidence 99999999999998778999999999999999997654 123457889999987789999999986 99
Q ss_pred eEEEEEcCchhhhccCCceEeCC-CCC-CCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccc
Q 012960 259 VSVGICGSERAFQLYSSGIFTGP-CST-SLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGIN 336 (452)
Q Consensus 259 V~v~i~~~~~~f~~Y~sGiy~~~-~~~-~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~ 336 (452)
|+|+|++...+|++|++|||+.+ |+. .++|||+|||||+++|++|||||||||++|||+|||||+|+.+ |+|||+
T Consensus 230 V~v~i~~~~~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~---n~CgI~ 306 (314)
T 1by8_A 230 VSVAIDASLTSFQFYSKGVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKN---NACGIA 306 (314)
T ss_dssp EEEEECCCSHHHHTEEEECBCCTTCCSSCCCEEEEEEEEEEETTEEEEEEECSBTTTSTBTTEEEECCSSS---CGGGTT
T ss_pred EEEEEEeChHHhhhccCceecCCCCCCCCCCeEEEEEEEeccCCceEEEEEcCCCCCcCcCCEEEEEcCCC---CcCCcc
Confidence 99999997679999999999765 776 7899999999999999999999999999999999999999853 489999
Q ss_pred cccccccc
Q 012960 337 MLASYPTK 344 (452)
Q Consensus 337 ~~~~~p~~ 344 (452)
+.++||++
T Consensus 307 ~~~~~p~~ 314 (314)
T 1by8_A 307 NLASFPKM 314 (314)
T ss_dssp SSCEEECC
T ss_pred CeeEEeeC
Confidence 99999973
No 5
>2c0y_A Procathepsin S; proenzyme, proteinase, hydrolase, thiol protease, prosegment binding loop, glycoprotein, lysosome, protease, zymogen; 2.1A {Homo sapiens}
Probab=100.00 E-value=9.5e-81 Score=620.03 Aligned_cols=304 Identities=41% Similarity=0.777 Sum_probs=264.7
Q ss_pred chhHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhccC---CCCceEEecccCCccchHHhhhhhcCcCCCcc
Q 012960 22 CSDINELFETWCKQHGKAYSSEQEKQQRLKIFEDNYAFVTQHNNM---GNSSFTLSLNAFADLTHQEFKASFLGFSAASI 98 (452)
Q Consensus 22 ~~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~~N~~---~~~s~~lg~N~fsDlt~eEf~~~~l~~~~~~~ 98 (452)
+..+..+|++||++|+|.|.+.+|+.+|+.||++|+++|++||++ ++.+|++|+|+|+|||.|||++++++......
T Consensus 5 ~~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~s~~~g~N~FaDlt~eEf~~~~~g~~~~~~ 84 (315)
T 2c0y_A 5 DPTLDHHWHLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSLMSSLRVPSQ 84 (315)
T ss_dssp CGGGHHHHHHHHHHHTCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCGGGGCCHHHHHHHTTSBCCCCG
T ss_pred hHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCcceEeccCccccCCHHHHHHHhcCCCCCcc
Confidence 346788999999999999988889999999999999999999975 35899999999999999999988887654322
Q ss_pred cccccCCccccCCCCCCCCCCeeecCCCCCcccccCCCCCcchHHHHHHHHHHHHHHHHhCCccccChHHHhhhc-CC-C
Q 012960 99 DHDRRRNASVQSPGNLRDVPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCD-RS-Y 176 (452)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~lP~s~Dwr~~g~vtpVkdQg~cGsCWAfA~~~alE~~~~~~~~~~~~lS~q~lvdc~-~~-~ 176 (452)
.. ....+. .....+||++||||++|+|+||||||.||||||||++++||++++|+++..++||+|+|+||+ .. .
T Consensus 85 ~~---~~~~~~-~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAfs~~~alE~~~~i~~g~~~~LSeq~lvdC~~~~~~ 160 (315)
T 2c0y_A 85 WQ---RNITYK-SNPNRILPDSVDWREKGCVTEVKYQGSCGAAWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYG 160 (315)
T ss_dssp GG---SCBCC-------CCCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGGGT
T ss_pred cc---CCcccc-CcccCCCCCeEecCCCCCcCCCcCcccCCCcHHHHHHHHHHHHHHHHhCCCcCcCHHHHHhhcccccC
Confidence 11 111111 111246999999999999999999999999999999999999999999999999999999998 43 3
Q ss_pred CCCCCCCchHHHHHHHHHhCCcCCCCCCCCCCCCCCccccccccchhhhhhccccceEEeeeeEecCCChHHHHHHHHHc
Q 012960 177 NSGCGGGLMDYAYQFVIKNHGIDTEKDYPYRGQAGQCNKQKVLHFLTSFVLQLNRHIVTIDGYKDVPENNEKQLLQAVVA 256 (452)
Q Consensus 177 ~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~lk~al~~ 256 (452)
+.||+||++..|++|+.+++||++|++|||.+.++.|.... ....++|.+|..++..++++||++|++
T Consensus 161 ~~gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~------------~~~~~~i~~~~~v~~~~~~~i~~al~~ 228 (315)
T 2c0y_A 161 NKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQYDS------------KYRAATCSKYTELPYGREDVLKEAVAN 228 (315)
T ss_dssp CCGGGCBCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCCG------------GGEEECCCEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHhCCcCchhcCCCccCCCCcccCC------------cccccccCCeEEeCCCCHHHHHHHHHH
Confidence 78999999999999998778999999999999999998654 234577889999987789999999986
Q ss_pred -CCeEEEEEcCchhhhccCCceEeCC-CCCCCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCCCccc
Q 012960 257 -QPVSVGICGSERAFQLYSSGIFTGP-CSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICG 334 (452)
Q Consensus 257 -gPV~v~i~~~~~~f~~Y~sGiy~~~-~~~~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~Cg 334 (452)
|||+|+|++...+|++|++|||+.+ |++.++|||+|||||+++|++|||||||||++|||+|||||+|+.+ |+||
T Consensus 229 ~GPV~v~i~~~~~~f~~Y~~Gvy~~~~c~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~---n~Cg 305 (315)
T 2c0y_A 229 KGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRMARNKG---NHCG 305 (315)
T ss_dssp TCCEEEEECCCSHHHHTEEEEEECCTTCCSCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSS---SGGG
T ss_pred cCCEEEEEecCchhhhccCCCcccCCCCCCcCCEEEEEEEEeecCCCcEEEEEcCCCCCcCCCcEEEEEcCCC---CccC
Confidence 9999999998679999999999765 8878899999999999999999999999999999999999999853 4899
Q ss_pred cccccccccc
Q 012960 335 INMLASYPTK 344 (452)
Q Consensus 335 I~~~~~~p~~ 344 (452)
|++.++||++
T Consensus 306 I~~~~~~p~~ 315 (315)
T 2c0y_A 306 IASFPSYPEI 315 (315)
T ss_dssp TTTSCEEEEC
T ss_pred cCceeEEeeC
Confidence 9999999973
No 6
>3qt4_A Cathepsin-L-like midgut cysteine proteinase; hydrolase, zymogen, intramolecular DISS bonds, insect larVal midgut; HET: PG4 PG6; 2.11A {Tenebrio molitor}
Probab=100.00 E-value=9.9e-81 Score=621.88 Aligned_cols=302 Identities=42% Similarity=0.778 Sum_probs=263.5
Q ss_pred chhHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhccC---CCCceEEecccCCccchHHhhhhhcCcCCCcc
Q 012960 22 CSDINELFETWCKQHGKAYSSEQEKQQRLKIFEDNYAFVTQHNNM---GNSSFTLSLNAFADLTHQEFKASFLGFSAASI 98 (452)
Q Consensus 22 ~~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~~N~~---~~~s~~lg~N~fsDlt~eEf~~~~l~~~~~~~ 98 (452)
+..+..+|++||++|+|.|.+.+|+.+|+.||++|+++|++||++ ++.+|+||+|+|+|||.|||++ +++.++...
T Consensus 20 ~~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlt~eEf~~-~~g~~~~~~ 98 (329)
T 3qt4_A 20 KSLFQEQWSQFKLTHKKSYSSPIEEIRRQLIFKDNVAKIAEHNAKFEKGEVTYSKAMNQFGDMSKEEFLA-YVNRGKAQK 98 (329)
T ss_dssp CCHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSEEECCCGGGGCCHHHHHH-HHHHTCCC-
T ss_pred HHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCeEEeccccccCCHHHHHH-hcCCccccc
Confidence 567888999999999999999889999999999999999999984 5789999999999999999999 776553211
Q ss_pred ccccc-CCccccCCCCCCCCCCeeecCCCCCcccccCCCCCcchHHHHHHHHHHHHHHHHhCCccccChHHHhhhcCC-C
Q 012960 99 DHDRR-RNASVQSPGNLRDVPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRS-Y 176 (452)
Q Consensus 99 ~~~~~-~~~~~~~~~~~~~lP~s~Dwr~~g~vtpVkdQg~cGsCWAfA~~~alE~~~~~~~~~~~~lS~q~lvdc~~~-~ 176 (452)
..... ....+. ... .+||++||||++ +||||||||.||||||||++++||++++++++.+++||||+|+||+.. .
T Consensus 99 ~~~~~~~~~~~~-~~~-~~lP~~~DwR~~-~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSeQ~LvdC~~~~g 175 (329)
T 3qt4_A 99 PKHPENLRMPYV-SSK-KPLAASVDWRSN-AVSEVKDQGQCGSSWSFSTTGAVEGQLALQRGRLTSLSEQNLIDCSSSYG 175 (329)
T ss_dssp -----CCEEECC-CCC-SCCCSCEECTTT-SCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGT
T ss_pred cccccccccccc-CCc-cCCCCCEEcccc-ccCCCccCCCCcChHHHHHHHHHHHHHHHHcCCcccCCHHHHHHhccccC
Confidence 11000 111122 112 579999999999 999999999999999999999999999999999999999999999964 3
Q ss_pred CCCCCCCchHHHHHHHHHhCCcCCCCCCCCCCCCCCccccccccchhhhhhccccceEEeeeeEecCCChHHHHHHHHHc
Q 012960 177 NSGCGGGLMDYAYQFVIKNHGIDTEKDYPYRGQAGQCNKQKVLHFLTSFVLQLNRHIVTIDGYKDVPENNEKQLLQAVVA 256 (452)
Q Consensus 177 ~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~lk~al~~ 256 (452)
+.||+||++..|++|+.++ ||++|++|||.+.++.|.... ....++|.+|..++..++++||++|++
T Consensus 176 ~~GC~GG~~~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~~~~------------~~~~~~i~~~~~v~~~~e~~lk~al~~ 242 (329)
T 3qt4_A 176 NAGCDGGWMDSAFSYIHDY-GIMSESAYPYEAQGDYCRFDS------------SQSVTTLSGYYDLPSGDENSLADAVGQ 242 (329)
T ss_dssp CCTTBCCCHHHHHHHHHHS-CBCBTTTSCCCSSCCCCCCCG------------GGCCBCCSEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCCCChhHHHHHHHHc-CCCcHHHeeeecCCCCCCCCc------------ccceEEeceEEEecCCCHHHHHHHHHh
Confidence 6799999999999999887 999999999999999998654 334567889999988889999999986
Q ss_pred -CCeEEEEEcCchhhhccCCceEeC-CCC-CCCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCCCcc
Q 012960 257 -QPVSVGICGSERAFQLYSSGIFTG-PCS-TSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGIC 333 (452)
Q Consensus 257 -gPV~v~i~~~~~~f~~Y~sGiy~~-~~~-~~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~C 333 (452)
|||+|+|++.. +|++|++|||.. .|. ..++|||+|||||+++|++|||||||||++|||+|||||+|+.+ |+|
T Consensus 243 ~GPV~v~i~a~~-~f~~Y~~GVy~~~~c~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~---n~C 318 (329)
T 3qt4_A 243 AGPVAVAIDATD-ELQFYSGGLFYDQTCNQSDLNHGVLVVGYGSDNGQDYWILKNSWGSGWGESGYWRQVRNYG---NNC 318 (329)
T ss_dssp TCCEEEEECCCG-GGTTEEEEEECCSSCCSSCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEESSSS---SGG
T ss_pred CCCEEEEEecCh-hhhhccCceeecCCCCCCcCCEEEEEEEEEeeCCccEEEEEeCCCCcccCCcEEEEEeCCC---Ccc
Confidence 99999999984 999999999965 575 57899999999999999999999999999999999999999873 499
Q ss_pred ccccccccccc
Q 012960 334 GINMLASYPTK 344 (452)
Q Consensus 334 gI~~~~~~p~~ 344 (452)
||++.++||++
T Consensus 319 gI~~~~~yp~v 329 (329)
T 3qt4_A 319 GIATAASYPAL 329 (329)
T ss_dssp GTTTTCEEEEC
T ss_pred CCCCceeEeeC
Confidence 99999999974
No 7
>1cs8_A Human procathepsin L; prosegment, propeptide, inhibition, hydrolase; HET: OCS; 1.80A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cjl_A 3hwn_A*
Probab=100.00 E-value=9.3e-80 Score=613.13 Aligned_cols=300 Identities=42% Similarity=0.849 Sum_probs=262.5
Q ss_pred hhHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhccC---CCCceEEecccCCccchHHhhhhhcCcCCCccc
Q 012960 23 SDINELFETWCKQHGKAYSSEQEKQQRLKIFEDNYAFVTQHNNM---GNSSFTLSLNAFADLTHQEFKASFLGFSAASID 99 (452)
Q Consensus 23 ~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~~N~~---~~~s~~lg~N~fsDlt~eEf~~~~l~~~~~~~~ 99 (452)
+.+..+|++||++|+|.| +.+|+.+|+.||++|+++|++||++ ++.+|++|+|+|+|||.|||++++++..+....
T Consensus 6 ~~~~~~f~~~~~~~~k~Y-~~~E~~~R~~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf~~~~~g~~~~~~~ 84 (316)
T 1cs8_A 6 HSLEAQWTKWKAMHNRLY-GMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPR 84 (316)
T ss_dssp GGGHHHHHHHHHHTTCCC-CTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCCTTTTCCHHHHHHHHCCBCCCCCS
T ss_pred HHHHHHHHHHHHHhCCCC-CHHHHHHHHHHHHHHHHHHHHhhhccccCCcceEEccCccCCCCHHHHHHHhcCCCCCccc
Confidence 457789999999999999 7789999999999999999999975 468999999999999999999888775543211
Q ss_pred ccccCCccccCCCCCCCCCCeeecCCCCCcccccCCCCCcchHHHHHHHHHHHHHHHHhCCccccChHHHhhhcCCC-CC
Q 012960 100 HDRRRNASVQSPGNLRDVPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSY-NS 178 (452)
Q Consensus 100 ~~~~~~~~~~~~~~~~~lP~s~Dwr~~g~vtpVkdQg~cGsCWAfA~~~alE~~~~~~~~~~~~lS~q~lvdc~~~~-~~ 178 (452)
....+. .....+||++||||++|+|+||||||.||||||||++++||++++|+++..++||+|+|+||+..+ +.
T Consensus 85 ----~~~~~~-~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~~~~g~~ 159 (316)
T 1cs8_A 85 ----KGKVFQ-EPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNE 159 (316)
T ss_dssp ----CCEECC-CCTTCCCCSCEEGGGGTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCC
T ss_pred ----cCcccc-CccccCCCCcEecCCCCCcCCCCcccCCccHHHHHHHHHHHHHHHHHcCCCcCcCHHHHHHhccccCCC
Confidence 011122 122347999999999999999999999999999999999999999999999999999999998643 78
Q ss_pred CCCCCchHHHHHHHHHhCCcCCCCCCCCCCCCCCccccccccchhhhhhccccceEEeeeeEecCCChHHHHHHHHHc-C
Q 012960 179 GCGGGLMDYAYQFVIKNHGIDTEKDYPYRGQAGQCNKQKVLHFLTSFVLQLNRHIVTIDGYKDVPENNEKQLLQAVVA-Q 257 (452)
Q Consensus 179 gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~lk~al~~-g 257 (452)
||+||++..|++|+.+++||++|++|||.+.++.|.... ....++|.+|..++. ++++||++|++ |
T Consensus 160 gC~GG~~~~a~~yi~~~~Gi~~e~~yPY~~~~~~C~~~~------------~~~~~~i~~~~~v~~-~~~~ik~~l~~~G 226 (316)
T 1cs8_A 160 GCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNP------------KYSVANDAGFVDIPK-QEKALMKAVATVG 226 (316)
T ss_dssp GGGCBCHHHHHHHHHHHTCEEBTTTSCCCSSCCCCCCCG------------GGEEECCCCEEECCS-CHHHHHHHHHHHC
T ss_pred CCCCCCHHHHHHHHHHhCCcCchhccCCCCCCCCcCCCC------------ccceeEeccEEEeCC-CHHHHHHHHHhcC
Confidence 999999999999998678999999999999999998654 234578899999986 89999999986 9
Q ss_pred CeEEEEEcCchhhhccCCceEeCC-CCC-CCCceEEEEEEe---ec-CCeeEEEEEcCCCCCCCCCcEEEEEecCCCCCC
Q 012960 258 PVSVGICGSERAFQLYSSGIFTGP-CST-SLDHAVLIVGYD---SE-NGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLG 331 (452)
Q Consensus 258 PV~v~i~~~~~~f~~Y~sGiy~~~-~~~-~~~HaV~IVGyg---~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~ 331 (452)
||+|+|++...+|++|++|||+.+ |+. .++|||+||||| ++ +|++|||||||||++|||+|||||+|+.+ |
T Consensus 227 PV~v~i~~~~~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGygd~~~~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~---n 303 (316)
T 1cs8_A 227 PISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRR---N 303 (316)
T ss_dssp CEEEEECCCSHHHHTEEEEEECCTTCCSSCCCEEEEEEEEEEECCSSCCEEEEEEECSBCTTSTBTTEEEEECSSS---S
T ss_pred CEEEEEecCChhhccccCceECCCCCCCCCCCEEEEEEEecCCcccCCCCcEEEEEcCCCCCcccCCEEEEECCCC---C
Confidence 999999998678999999999754 775 789999999999 66 79999999999999999999999999863 4
Q ss_pred ccccccccccccc
Q 012960 332 ICGINMLASYPTK 344 (452)
Q Consensus 332 ~CgI~~~~~~p~~ 344 (452)
+|||++.++||++
T Consensus 304 ~CgI~~~~~~p~~ 316 (316)
T 1cs8_A 304 HCGIASAASYPTV 316 (316)
T ss_dssp GGGTTTSCEEECC
T ss_pred ccCccceeeEeeC
Confidence 8999999999973
No 8
>2o6x_A Procathepsin L1, secreted cathepsin L 1; hydrolase, thiol protease, cysteine protease, zymogen, hydro; 1.40A {Fasciola hepatica}
Probab=100.00 E-value=6e-79 Score=605.78 Aligned_cols=297 Identities=43% Similarity=0.830 Sum_probs=257.8
Q ss_pred HHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhccC---CCCceEEecccCCccchHHhhhhhcC-cCCCcccccc
Q 012960 27 ELFETWCKQHGKAYSSEQEKQQRLKIFEDNYAFVTQHNNM---GNSSFTLSLNAFADLTHQEFKASFLG-FSAASIDHDR 102 (452)
Q Consensus 27 ~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~~N~~---~~~s~~lg~N~fsDlt~eEf~~~~l~-~~~~~~~~~~ 102 (452)
.+|++||++|+|+|.+.+|+.+| .||++|+++|++||++ ++.+|++|+|+|+|||.|||++++++ .........
T Consensus 3 ~~f~~~~~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~~N~~~~~g~~~~~~g~N~F~Dlt~eEf~~~~~g~~~~~~~~~~- 80 (310)
T 2o6x_A 3 DLWHQWKRMYNKEYNGADDQHRR-NIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAKYLTEMSRASDILS- 80 (310)
T ss_dssp HHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHHHHHTTSSSEEECCCTTTTSCHHHHHHHHCCCCCCGGGGSC-
T ss_pred HHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHhhhccCCCcEEEeccccCCCCHHHHHHHhcCCCCCcccccc-
Confidence 58999999999999988899999 9999999999999975 36799999999999999999988877 443221110
Q ss_pred cCCccccCCCCCCCCCCeeecCCCCCcccccCCCCCcchHHHHHHHHHHHHHHHHhCCccccChHHHhhhcCCC-CCCCC
Q 012960 103 RRNASVQSPGNLRDVPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSY-NSGCG 181 (452)
Q Consensus 103 ~~~~~~~~~~~~~~lP~s~Dwr~~g~vtpVkdQg~cGsCWAfA~~~alE~~~~~~~~~~~~lS~q~lvdc~~~~-~~gC~ 181 (452)
....+. ... .+||++||||++|+|+||||||.||||||||++++||++++|+++..++||+|+|+||+..+ +.||+
T Consensus 81 -~~~~~~-~~~-~~lP~~~DwR~~g~vtpVkdQg~CGSCWAfa~~~alE~~~~i~~g~~~~LS~q~lvdC~~~~~~~gC~ 157 (310)
T 2o6x_A 81 -HGVPYE-ANN-RAVPDKIDWRESGYVTEVKDQGNCGSGWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSRPWGNNGCG 157 (310)
T ss_dssp -SSEECC-C-----CCSCEEGGGGTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSSCCCBCHHHHHHHCGGGTCCGGG
T ss_pred -cCCccc-ccc-CCCCCeEecCcCCCCCCcccCCCCCccHHHHhHHHHHHHHHHHhCCCcCcCHHHHHHhhhccCCCCCC
Confidence 111121 111 26999999999999999999999999999999999999999999999999999999998643 78999
Q ss_pred CCchHHHHHHHHHhCCcCCCCCCCCCCCCCCccccccccchhhhhhccccceEEeeeeEecCCChHHHHHHHHHc-CCeE
Q 012960 182 GGLMDYAYQFVIKNHGIDTEKDYPYRGQAGQCNKQKVLHFLTSFVLQLNRHIVTIDGYKDVPENNEKQLLQAVVA-QPVS 260 (452)
Q Consensus 182 GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~lk~al~~-gPV~ 260 (452)
||++..|++|+. ++||++|++|||.+.++.|.... ....++|.+|..++..++++||++|++ |||+
T Consensus 158 GG~~~~a~~yi~-~~Gi~~e~~yPY~~~~~~C~~~~------------~~~~~~i~~~~~v~~~~~~~i~~~l~~~GPV~ 224 (310)
T 2o6x_A 158 GGLMENAYQYLK-QFGLETESSYPYTAVEGQCRYNK------------QLGVAKVTGFYTVHSGSEVELKNLVGAEGPAA 224 (310)
T ss_dssp CCCHHHHHHHHT-TSCBCBTTTSCCCSSCCCCCCCG------------GGCCEEEEEEEEECSCCHHHHHHHHHHHCCEE
T ss_pred CCCHHHHHHHHH-HCCcCchhcCCCCCCCCCccCCC------------CCCceEeCeEEEeCCCCHHHHHHHHHhcCCeE
Confidence 999999999997 67999999999999989997653 234578899999987789999999986 9999
Q ss_pred EEEEcCchhhhccCCceEe-CCCCC-CCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccc
Q 012960 261 VGICGSERAFQLYSSGIFT-GPCST-SLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINML 338 (452)
Q Consensus 261 v~i~~~~~~f~~Y~sGiy~-~~~~~-~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~ 338 (452)
|+|++. .+|++|++|||+ +.|+. .++|||+|||||+++|++|||||||||++|||+|||||+|+.+ |+|||++.
T Consensus 225 v~i~~~-~~f~~Y~~Gvy~~~~c~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~---n~Cgi~~~ 300 (310)
T 2o6x_A 225 VAVDVE-SDFMMYRSGIYQSQTCSPLRVNHAVLAVGYGTQGGTDYWIVKNSWGLSWGERGYIRMVRNRG---NMCGIASL 300 (310)
T ss_dssp EEECCC-HHHHTEEEEEECCSSCCTTCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSS---SGGGTTTS
T ss_pred EEEecc-hhhhhCCCceecCCCCCCCCCCEEEEEEEEeccCCceEEEEEeCCCCccCCCcEEEEEcCCC---CcCCccce
Confidence 999997 689999999996 45774 7899999999999999999999999999999999999999863 48999999
Q ss_pred ccccccc
Q 012960 339 ASYPTKT 345 (452)
Q Consensus 339 ~~~p~~~ 345 (452)
++||++.
T Consensus 301 ~~~p~~~ 307 (310)
T 2o6x_A 301 ASLPMVA 307 (310)
T ss_dssp EEEEEEE
T ss_pred eeEEEee
Confidence 9999863
No 9
>1xkg_A DER P I, major mite fecal allergen DER P 1; major allergen, cysteine protease, house DUST mite, dermatop pteronyssinus; 1.61A {Dermatophagoides pteronyssinus} SCOP: d.3.1.1
Probab=100.00 E-value=3.4e-75 Score=578.31 Aligned_cols=287 Identities=29% Similarity=0.501 Sum_probs=247.4
Q ss_pred HHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhccCCCCceEEecccCCccchHHhhhhhcCcCCCcccccccCCcc
Q 012960 28 LFETWCKQHGKAYSSEQEKQQRLKIFEDNYAFVTQHNNMGNSSFTLSLNAFADLTHQEFKASFLGFSAASIDHDRRRNAS 107 (452)
Q Consensus 28 ~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~s~~lg~N~fsDlt~eEf~~~~l~~~~~~~~~~~~~~~~ 107 (452)
+|++||++|+|.|.+.+|+.+|+.||++|+++|++ |+ + |+|+|+|||.|||++++++........... ..
T Consensus 7 ~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~-N~----~---g~N~F~Dlt~eEf~~~~~~~~~~~~~~~~~--~~ 76 (312)
T 1xkg_A 7 TFEEYKKAFNKSYATFEDEEAARKNFLESVKYVQS-NG----G---AINHLSDLSLDEFKNRFLMSAEAFEHLKTQ--FD 76 (312)
T ss_dssp SHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHH-HC----C---CCCTTTTSCHHHHHHHHSBCHHHHHHHHHH--HC
T ss_pred HHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHh-cc----C---CCCcccCCCHHHHHHHhcCCCCccccccCC--cc
Confidence 69999999999999889999999999999999999 74 1 999999999999999777733211100000 01
Q ss_pred ccCC----CCCCCCCCeeecCCCCCcccccCCCCCcchHHHHHHHHHHHHHHHHhCCccccChHHHhhhcCCCCCCCCCC
Q 012960 108 VQSP----GNLRDVPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGG 183 (452)
Q Consensus 108 ~~~~----~~~~~lP~s~Dwr~~g~vtpVkdQg~cGsCWAfA~~~alE~~~~~~~~~~~~lS~q~lvdc~~~~~~gC~GG 183 (452)
+... ....+||++||||++|+|+||||||.||||||||++++||++++|+++..++||||+|+||+. ..||+||
T Consensus 77 ~~~~~~~~~~~~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~g~~~~LSeq~lvdC~~--~~GC~GG 154 (312)
T 1xkg_A 77 LNAETNACSINGNAPAEIDLRQMRTVTPIRMQGGCGSAWAFSGVAATESAYLAYRDQSLDLAEQELVDCAS--QHGCHGD 154 (312)
T ss_dssp -----CBCCCCSCCCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTC--SSTTBCC
T ss_pred cccccccccccccCCCccccccCCCcCCccccCCCCccHHHHHHHHHHHHHHHHhCCCCCcCHHHHHhccC--CCCCCCC
Confidence 1100 012479999999999999999999999999999999999999999999999999999999982 2899999
Q ss_pred chHHHHHHHHHhCCcCCCCCCCCCCCCCCccccccccchhhhhhccccceEEeeeeEecCCChHHHHHHHHHc--CCeEE
Q 012960 184 LMDYAYQFVIKNHGIDTEKDYPYRGQAGQCNKQKVLHFLTSFVLQLNRHIVTIDGYKDVPENNEKQLLQAVVA--QPVSV 261 (452)
Q Consensus 184 ~~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~lk~al~~--gPV~v 261 (452)
++..|++|+.+ .||++|++|||.+.++.|. .. ....++|.+|..++..++++||++|++ |||+|
T Consensus 155 ~~~~a~~yi~~-~Gi~~e~~yPY~~~~~~C~-~~------------~~~~~~i~~y~~v~~~~~~~ik~al~~~~GPV~v 220 (312)
T 1xkg_A 155 TIPRGIEYIQH-NGVVQESYYRYVAREQSCR-RP------------NAQRFGISNYCQIYPPNANKIREALAQTHSAIAV 220 (312)
T ss_dssp CHHHHHHHHHH-HCEEBGGGSCCCSSCCCCC-CC------------SSCEECCSEEEECCSCCHHHHHHHHHHHCCCEEE
T ss_pred CHHHHHHHHHH-cCCCccccCCccCCCCCCC-CC------------CCceEEEeeEEEeCCCCHHHHHHHHHhcCCCEEE
Confidence 99999999987 6999999999999999998 33 234678999999987789999999986 89999
Q ss_pred EEEcCch-hhhccCCceEeC-CCC-C-CCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCCCcccccc
Q 012960 262 GICGSER-AFQLYSSGIFTG-PCS-T-SLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINM 337 (452)
Q Consensus 262 ~i~~~~~-~f~~Y~sGiy~~-~~~-~-~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~ 337 (452)
+|+++.. +|++|++|||+. .|. . . +|||+|||||+++|++|||||||||++|||+|||||+|+. |+|||++
T Consensus 221 ~i~~~~~~~f~~Y~~GVy~~~~c~~~~~-~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~----n~CgI~~ 295 (312)
T 1xkg_A 221 IIGIKDLDAFRHYDGRTIIQRDNGYQPN-YHAVNIVGYSNAQGVDYWIVRNSWDTNWGDNGYGYFAANI----DLMMIEE 295 (312)
T ss_dssp EEEESCHHHHHTCCSSSCBCCCCSSCCE-EEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTT
T ss_pred EEEecccccccccCCcEEcCCCCCCCcC-ceEEEEEEEeccCCceEEEEEeCCCCcccCCcEEEEEcCC----Ccccccc
Confidence 9999854 899999999965 576 4 6 9999999999999999999999999999999999999984 4899999
Q ss_pred cccccccc
Q 012960 338 LASYPTKT 345 (452)
Q Consensus 338 ~~~~p~~~ 345 (452)
.++||++.
T Consensus 296 ~~~~~~~~ 303 (312)
T 1xkg_A 296 YPYVVILG 303 (312)
T ss_dssp CCEEEECT
T ss_pred eeEEeecc
Confidence 99999865
No 10
>3pdf_A Cathepsin C, dipeptidyl peptidase 1; two domains, cystein protease, hydrolase-hydrolase inhibitor; HET: LXV NAG; 1.85A {Homo sapiens} PDB: 1jqp_A* 2djf_B* 1k3b_B* 2djg_B* 2djf_A* 1k3b_A* 2djg_A* 2djf_C* 1k3b_C* 2djg_C*
Probab=100.00 E-value=1.2e-68 Score=552.29 Aligned_cols=280 Identities=29% Similarity=0.549 Sum_probs=181.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCceEEe-cccCCccchHHhhhhhcCcCCCcccccccCCccccCCCCCCCCCCeee
Q 012960 44 QEKQQRLKIFEDNYAFVTQHNNMGNSSFTLS-LNAFADLTHQEFKASFLGFSAASIDHDRRRNASVQSPGNLRDVPASID 122 (452)
Q Consensus 44 ~E~~~R~~iF~~N~~~I~~~N~~~~~s~~lg-~N~fsDlt~eEf~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lP~s~D 122 (452)
.|+.+|+.||++|+++|++||++ +.+|+++ +|+|+|||.|||++++++.......... ............+||++||
T Consensus 135 ~~~~~R~~if~~N~~~I~~~N~~-~~~~~~~~~n~faDlT~eEf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~lP~s~D 212 (441)
T 3pdf_A 135 SQEKYSNRLYKYDHNFVKAINAI-QKSWTATTYMEYETLTLGDMIRRSGGHSRKIPRPKP-APLTAEIQQKILFLPTSWD 212 (441)
T ss_dssp -------------------------------------------------------------------------CCCSCEE
T ss_pred hhHHHHHHHHHHHHHHHHHHHcc-CCceEeecccccccCCHHHHHHHhCCCccccccccc-CccccccccccccCCCCEE
Confidence 46689999999999999999998 7899998 8999999999999987765432211000 0000000123467999999
Q ss_pred cCCCC---CcccccCCCCCcchHHHHHHHHHHHHHHHHhCCcc--ccChHHHhhhcCCCCCCCCCCchHHH-HHHHHHhC
Q 012960 123 WRKKG---AVTEVKDQASCGACWAFSATGAIEGINKIVTGSLV--SLSEQELIDCDRSYNSGCGGGLMDYA-YQFVIKNH 196 (452)
Q Consensus 123 wr~~g---~vtpVkdQg~cGsCWAfA~~~alE~~~~~~~~~~~--~lS~q~lvdc~~~~~~gC~GG~~~~a-~~~~~~~~ 196 (452)
||+++ +|+||||||.||||||||++++||++++|+++..+ .||||+|+||+. .+.||+||++..+ ++|+.++
T Consensus 213 wR~~~g~~~VtpVkdQG~CGSCWAFsa~~alE~~~~i~tg~~~~~~LSeQ~LvdC~~-~~~GC~GG~~~~aa~~yi~~~- 290 (441)
T 3pdf_A 213 WRNVHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSCSQ-YAQGCEGGFPYLIAGKYAQDF- 290 (441)
T ss_dssp TTCBTTBCCSCCCCBCTTSBCHHHHHHHHHHHHHHHHHHTTSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHTTHHHHHT-
T ss_pred CCcCCCCCccCcccccCCCchHHHHHHHHHHHHHHHHhccCCCccccCHHHHHhhcc-CCCCCCCCchhHHHHHHHHhc-
Confidence 99964 89999999999999999999999999999998765 499999999996 5899999999987 8999665
Q ss_pred CcCCCCCCCCCCCCCCccccccccchhhhhhccccceEEeeeeEecC----CChHHHHHHHHHc-CCeEEEEEcCchhhh
Q 012960 197 GIDTEKDYPYRGQAGQCNKQKVLHFLTSFVLQLNRHIVTIDGYKDVP----ENNEKQLLQAVVA-QPVSVGICGSERAFQ 271 (452)
Q Consensus 197 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~----~~~~~~lk~al~~-gPV~v~i~~~~~~f~ 271 (452)
||++|++|||.+.++.|.... ......+.+|..++ ..++++||++|++ |||+|+|++. ++|+
T Consensus 291 Gi~tE~~yPY~~~~~~C~~~~------------~~~~~~~~~y~~v~~~~~~~~e~~ik~al~~~GPVsvai~a~-~~F~ 357 (441)
T 3pdf_A 291 GLVEEACFPYTGTDSPCKMKE------------DCFRYYSSEYHYVGGFYGGCNEALMKLELVHHGPMAVAFEVY-DDFL 357 (441)
T ss_dssp CBCBGGGSCCCSSCCCSCCCS------------SCCCBCEEEEEETTSSTTCCCHHHHHHHHHHHCCEEEEECCC-GGGG
T ss_pred CCCcHHHeeecccCCCCCCcc------------ccceeeeccEEEeCCccCCCcHHHHHHHHHHCCCeEEEEEec-cccc
Confidence 999999999999999998653 22334566777765 3578899998875 9999999997 7999
Q ss_pred ccCCceEeCCCC-------CCCCceEEEEEEeec--CCeeEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccccc
Q 012960 272 LYSSGIFTGPCS-------TSLDHAVLIVGYDSE--NGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYP 342 (452)
Q Consensus 272 ~Y~sGiy~~~~~-------~~~~HaV~IVGyg~~--~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p 342 (452)
+|++|||..++. ..++|||+|||||++ +|++|||||||||++|||+|||||+|+.| +|||++.++++
T Consensus 358 ~Y~sGVy~~~~~~~~~~~~~~~~HaV~iVGyG~~~~~G~~YWIVkNSWG~~WGe~GYfri~rg~n----~CGI~s~~~a~ 433 (441)
T 3pdf_A 358 HYKKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTGWGENGYFRIRRGTD----ECAIESIAVAA 433 (441)
T ss_dssp GCCSSEECCC---CCCCCCCCCCEEEEEEEEEECTTTCCEEEEEECSBCTTSTBTTEEEEECSSC----GGGTTSCCEEE
T ss_pred ccCCceEecCCCCcccCCCCcCCeEEEEEEecccCCCCceEEEEEcCCCCCcCCCeEEEEEcCCC----ccCCCCceEEe
Confidence 999999965432 247999999999985 68999999999999999999999999874 89999998877
Q ss_pred cc
Q 012960 343 TK 344 (452)
Q Consensus 343 ~~ 344 (452)
+.
T Consensus 434 ~P 435 (441)
T 3pdf_A 434 TP 435 (441)
T ss_dssp EE
T ss_pred ec
Confidence 63
No 11
>3hhi_A Cathepsin B-like cysteine protease; occluding loop, hydrolase, THIO protease; HET: 074; 1.60A {Trypanosoma brucei} SCOP: d.3.1.0 PDB: 4hwy_A* 3mor_A*
Probab=100.00 E-value=4e-68 Score=530.67 Aligned_cols=291 Identities=23% Similarity=0.392 Sum_probs=186.8
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCceEEecc-cCCccchHHhhhhhcCcCCCcccccccCCccccCCCCCCCCCCeeecCC
Q 012960 47 QQRLKIFEDNYAFVTQHNNMGNSSFTLSLN-AFADLTHQEFKASFLGFSAASIDHDRRRNASVQSPGNLRDVPASIDWRK 125 (452)
Q Consensus 47 ~~R~~iF~~N~~~I~~~N~~~~~s~~lg~N-~fsDlt~eEf~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lP~s~Dwr~ 125 (452)
+.|+..+..+.++|++||++.+.+|++++| +|+|||.|||+++ ++...............+.......+||++||||+
T Consensus 2 ~~~~~a~~~~~~~i~~~N~~~~~~~~~~~n~~f~dlt~eE~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~lP~s~DwR~ 80 (325)
T 3hhi_A 2 LVAEDAPVLSKAFVDRVNRLNRGIWKAKYDGVMQNITLREAKRL-NGVIKKNNNASILPKRRFTEEEARAPLPSSFDSAE 80 (325)
T ss_dssp -------------------------------------------------------CCSCBCCCCHHHHHCCCCSCEEHHH
T ss_pred CcccccccccHHHHHHHHhCCCCceEEecccccccCCHHHHHHH-hCCCCCCcccccccCccccccccccCCCCcEehhH
Confidence 457788888999999999875689999999 8999999999886 45433221100000001100011257999999999
Q ss_pred C----CCcccccCCCCCcchHHHHHHHHHHHHHHHHhCC-ccccChHHHhhhcCCCCCCCCCCchHHHHHHHHHhCCcCC
Q 012960 126 K----GAVTEVKDQASCGACWAFSATGAIEGINKIVTGS-LVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKNHGIDT 200 (452)
Q Consensus 126 ~----g~vtpVkdQg~cGsCWAfA~~~alE~~~~~~~~~-~~~lS~q~lvdc~~~~~~gC~GG~~~~a~~~~~~~~Gi~~ 200 (452)
+ |.|+||||||.||||||||++++||++++|+++. .++||||+|+||+...+.||+||++..|++|+.++ ||++
T Consensus 81 ~w~~~g~vtpVkdQg~CGSCWAFsa~~alE~~~~i~~~~~~~~LSeQ~LvdC~~~~~~GC~GG~~~~A~~yi~~~-Gi~~ 159 (325)
T 3hhi_A 81 AWPNCPTIPQIADQSACGSCWAVAAASAMSDRFCTMGGVQDVHISAGDLLACCSDCGDGCNGGDPDRAWAYFSST-GLVS 159 (325)
T ss_dssp HSTTCTTTTCCCBCCSSBCHHHHHHHHHHHHHHHHTSSCSSCCBCHHHHHHHCGGGBCTTBCBCHHHHHHHHHHT-CBCB
T ss_pred hcCCCCccccccCCCCccccHHHHHHHHHHHHHHHHhCCCccccCHHHHHHhccCCCCCCCCCCHHHHHHHHHHh-CCCc
Confidence 8 8999999999999999999999999999999987 89999999999987557899999999999999876 9999
Q ss_pred CCCCCCC-CC----------CCCccccc-cccchhh---hhhccccceEEeeeeEecCCChHHHHHHHHH-cCCeEEEEE
Q 012960 201 EKDYPYR-GQ----------AGQCNKQK-VLHFLTS---FVLQLNRHIVTIDGYKDVPENNEKQLLQAVV-AQPVSVGIC 264 (452)
Q Consensus 201 e~~yPY~-~~----------~~~C~~~~-~~~~~~~---~~~~~~~~~~~i~~~~~i~~~~~~~lk~al~-~gPV~v~i~ 264 (452)
|++|||. +. .+.|.... ..+.+.. ...........+.+|. + .++++||++|+ +|||+|+|+
T Consensus 160 e~~yPY~~~~c~~~~~~~~~~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~y~-v--~~~~~i~~~i~~~GPV~v~i~ 236 (325)
T 3hhi_A 160 DYCQPYPFPHCSHHSKSKNGYPPCSQFNFDTPKCDYTCDDPTIPVVNYRSWTSYA-L--QGEDDYMRELFFRGPFEVAFD 236 (325)
T ss_dssp TTTSCCSSCCCBSSSCCTTCCCBGGGCCCCCCCCCSSCSSTTSCCCCBCEEEEEE-E--CSHHHHHHHHHHHCCEEEEEE
T ss_pred ccccCCccccccccccccccCCCCCCcccCCcchhhcccccccccceEEeecceE-e--CCHHHHHHHHHHCCCEEEEEE
Confidence 9999998 32 25565210 0000000 0011123345667776 5 67899999987 599999999
Q ss_pred cCchhhhccCCceEeCCCCC-CCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCCCcccccccccccc
Q 012960 265 GSERAFQLYSSGIFTGPCST-SLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPT 343 (452)
Q Consensus 265 ~~~~~f~~Y~sGiy~~~~~~-~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~ 343 (452)
++ ++|++|++|||+.++.. .++|||+|||||+++|++|||||||||++|||+|||||+|+.| +|||++.+++++
T Consensus 237 ~~-~~f~~Y~~GVy~~~~~~~~~~HaV~iVGyG~~~g~~YWivkNSWG~~WGe~GY~~i~rg~n----~CGI~~~~~~g~ 311 (325)
T 3hhi_A 237 VY-EDFIAYNSGVYHHVSGQYLGGHAVRLVGWGTSNGVPYWKIANSWNTEWGMDGYFLIRRGSS----ECGIEDGGSAGI 311 (325)
T ss_dssp EE-HHHHTCCSSEECCCSCCEEEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSC----GGGTTSCEEEEE
T ss_pred ec-cccccccCceecCCCCCCCCCEEEEEEEEEecCCceEEEEEeCCCCCcccCCEEEEEcCCC----eecCccceEEee
Confidence 96 79999999999876655 4599999999999999999999999999999999999999864 899999998887
Q ss_pred ccCC
Q 012960 344 KTGQ 347 (452)
Q Consensus 344 ~~~~ 347 (452)
+..+
T Consensus 312 p~~~ 315 (325)
T 3hhi_A 312 PLAP 315 (325)
T ss_dssp EC--
T ss_pred cCCC
Confidence 6544
No 12
>1cqd_A Protein (protease II); cysteine protease, glycoprotein, proline specificity, carboh papain family, hydrolase; HET: NAG FUL FUC; 2.10A {Zingiber officinale} SCOP: d.3.1.1
Probab=100.00 E-value=1.4e-64 Score=480.22 Aligned_cols=219 Identities=56% Similarity=1.078 Sum_probs=200.1
Q ss_pred CCCCeeecCCCCCcccccCCCCCcchHHHHHHHHHHHHHHHHhCCccccChHHHhhhcCCCCCCCCCCchHHHHHHHHHh
Q 012960 116 DVPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKN 195 (452)
Q Consensus 116 ~lP~s~Dwr~~g~vtpVkdQg~cGsCWAfA~~~alE~~~~~~~~~~~~lS~q~lvdc~~~~~~gC~GG~~~~a~~~~~~~ 195 (452)
+||++||||++|+|+||||||.||||||||++++||++++++++..++||||+|+||... +.||+||++..|++|++++
T Consensus 2 ~lP~~~DwR~~~~v~~VkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~-~~gC~GG~~~~a~~y~~~~ 80 (221)
T 1cqd_A 2 DLPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCTTA-NHGCRGGWMNPAFQFIVNN 80 (221)
T ss_dssp -CCSCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTT-SCTTBCCCHHHHHHHHHHH
T ss_pred CCCCcCcCCCCCCcCCcccCCCCccHHHHHHHHHHHHHHHHhcCCeeeeccceeEECCCC-CCCCCCCCHHHHHHHHHHh
Confidence 589999999999999999999999999999999999999999999999999999999863 7899999999999999887
Q ss_pred CCcCCCCCCCCCCCCCCccccccccchhhhhhccccceEEeeeeEecCCChHHHHHHHHHcCCeEEEEEcCchhhhccCC
Q 012960 196 HGIDTEKDYPYRGQAGQCNKQKVLHFLTSFVLQLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSS 275 (452)
Q Consensus 196 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~lk~al~~gPV~v~i~~~~~~f~~Y~s 275 (452)
+||++|++|||.+.++.|.... ....++|++|..++.+++++||++|++|||+|+|++..++|++|++
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~~------------~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~ 148 (221)
T 1cqd_A 81 GGINSEETYPYRGQDGICNSTV------------NAPVVSIDSYENVPSHNEQSLQKAVANQPVSVTMDAAGRDFQLYRS 148 (221)
T ss_dssp TSBCBTTTSCCCSSCCCCCSSS------------CCCSBCCSEEEECCSSCHHHHHHHHTTSCEEEEECCCSHHHHTCCS
T ss_pred CCccccccCCccCCCCCcCCCC------------CCceEEeccEEEeCCchHHHHHHHHHhCCEEEEEeccCcccccccC
Confidence 8999999999999988997654 2345678899999888899999999999999999997679999999
Q ss_pred ceEeCCCCCCCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccccccccCC
Q 012960 276 GIFTGPCSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTKTGQ 347 (452)
Q Consensus 276 Giy~~~~~~~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~~~~ 347 (452)
|||+.+|.+.++|||+|||||+++|++|||||||||++|||+|||||+|+.+...|+|||+++++||++..+
T Consensus 149 Giy~~~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~~~~ 220 (221)
T 1cqd_A 149 GIFTGSCNISANHALTVVGYGTENDKDFWIVKNSWGKNWGESGYIRAERNIENPDGKCGITRFASYPVKKGT 220 (221)
T ss_dssp SEECCCCCCCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEECC--
T ss_pred ccccCCCCCcCCeEEEEEEEcccCCCcEEEEEeCCCCCcccCCEEEEEcCCCCCCcccceeeeeeEEEecCC
Confidence 999888888899999999999999999999999999999999999999987655679999999999997643
No 13
>3p5u_A Actinidin; SAD, cysteine proteinases, hydrolase; 1.50A {Actinidia arguta} SCOP: d.3.1.1 PDB: 3p5v_A 3p5w_A 3p5x_A 1aec_A* 2act_A
Probab=100.00 E-value=1.8e-64 Score=479.36 Aligned_cols=217 Identities=57% Similarity=1.058 Sum_probs=199.9
Q ss_pred CCCeeecCCCCCcccccCCCCCcchHHHHHHHHHHHHHHHHhCCccccChHHHhhhcCCC-CCCCCCCchHHHHHHHHHh
Q 012960 117 VPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSY-NSGCGGGLMDYAYQFVIKN 195 (452)
Q Consensus 117 lP~s~Dwr~~g~vtpVkdQg~cGsCWAfA~~~alE~~~~~~~~~~~~lS~q~lvdc~~~~-~~gC~GG~~~~a~~~~~~~ 195 (452)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||||+|+||+... +.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~lE~~~~i~~~~~~~LS~q~l~dC~~~~~~~gC~GG~~~~a~~~~~~~ 80 (220)
T 3p5u_A 1 LPDYVDWRSSGAVVDIKDQGQCGSAWAFSTIAAVEGINKIATGDLISLSEQELVDCGRTQNTRGCDGGFMTDGFQFIINN 80 (220)
T ss_dssp CCSCEETTTTTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCCSSCCTTBCCCHHHHHHHHHHH
T ss_pred CCCCCcCCcCCCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHhHcEECCCCCCCCCCCCCCHHHHHHHHHHh
Confidence 799999999999999999999999999999999999999999999999999999999754 7899999999999999888
Q ss_pred CCcCCCCCCCCCCCCCCccccccccchhhhhhccccceEEeeeeEecCCChHHHHHHHHHcCCeEEEEEcCchhhhccCC
Q 012960 196 HGIDTEKDYPYRGQAGQCNKQKVLHFLTSFVLQLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSS 275 (452)
Q Consensus 196 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~lk~al~~gPV~v~i~~~~~~f~~Y~s 275 (452)
+||++|++|||.+.++.|.... .....++|.+|..++.+++++|+++|++|||+|+|++..++|++|++
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~~-----------~~~~~~~i~~~~~v~~~~~~~l~~~l~~GPV~v~~~~~~~~f~~Y~~ 149 (220)
T 3p5u_A 81 GGINTEANYPYTAEEGQCNLDL-----------QQEKYVSIDTYENVPYNNEWALQTAVAYQPVSVALEAAGYNFQHYSS 149 (220)
T ss_dssp TCBCBTTTSCCCSSCCCCCHHH-----------HTCCSBCCCEEEECCTTCHHHHHHHHTTSCEEEEECCCSHHHHTCCS
T ss_pred CCcCcccccccccCCCCcCcCC-----------CCCceEEEccEEEeCCCcHHHHHHHHhcCCEEEEEecCchhhccccC
Confidence 8999999999999988897544 12334678899999888899999999889999999997679999999
Q ss_pred ceEeCCCCCCCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCCCcccccccccccccc
Q 012960 276 GIFTGPCSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTKT 345 (452)
Q Consensus 276 Giy~~~~~~~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~~ 345 (452)
|||+.+|.+.++|||+|||||+++|++|||||||||++|||+|||||+|+.+ ..|+|||+++++||++.
T Consensus 150 Giy~~~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~-~~~~Cgi~~~~~~p~~~ 218 (220)
T 3p5u_A 150 GIFTGPCGTAVDHAVTIVGYGTEGGIDYWIVKNSWGTTWGEEGYMRIQRNVG-GVGQCGIAKKASYPVKY 218 (220)
T ss_dssp SEECCCCCCSCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECCCC-TTCGGGTTSSCEEEECS
T ss_pred ceECCCCCCccceEEEEEEEecCCCceEEEEECCCCCCcccCCEEEEECCCC-CCCccCcccccceEEEe
Confidence 9998888888999999999999999999999999999999999999999986 45799999999999864
No 14
>1s4v_A Cysteine endopeptidase; KDEL ER retention signal, endosperm, ricinosomes, SEED germi senescence, hydrolase-hydrolase inhibitor complex; 2.00A {Ricinus communis} SCOP: d.3.1.1
Probab=100.00 E-value=3.3e-64 Score=480.10 Aligned_cols=223 Identities=57% Similarity=1.044 Sum_probs=202.4
Q ss_pred CCCCeeecCCCCCcccccCCCCCcchHHHHHHHHHHHHHHHHhCCccccChHHHhhhcCCCCCCCCCCchHHHHHHHHHh
Q 012960 116 DVPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKN 195 (452)
Q Consensus 116 ~lP~s~Dwr~~g~vtpVkdQg~cGsCWAfA~~~alE~~~~~~~~~~~~lS~q~lvdc~~~~~~gC~GG~~~~a~~~~~~~ 195 (452)
+||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||+...+.||+||++..|++|+.++
T Consensus 1 ~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~~~gC~GG~~~~a~~y~~~~ 80 (229)
T 1s4v_A 1 TVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTDQNQGCNGGLMDYAFEFIKQR 80 (229)
T ss_dssp CCCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCSSCCTTBCBCHHHHHHHHHHH
T ss_pred CCCCCEeCCCCCCCCCCccCccchHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhCCCCCCCCCCCCHHHHHHHHHHh
Confidence 48999999999999999999999999999999999999999999999999999999986457899999999999999887
Q ss_pred CCcCCCCCCCCCCCCCCccccccccchhhhhhccccceEEeeeeEecCCChHHHHHHHHHcCCeEEEEEcCchhhhccCC
Q 012960 196 HGIDTEKDYPYRGQAGQCNKQKVLHFLTSFVLQLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSS 275 (452)
Q Consensus 196 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~lk~al~~gPV~v~i~~~~~~f~~Y~s 275 (452)
+|+++|++|||.+..+.|.... .....++|.+|..++.+++++|+++|++|||+|+|++...+|++|++
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~~-----------~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~ 149 (229)
T 1s4v_A 81 GGITTEANYPYEAYDGTCDVSK-----------ENAPAVSIDGHENVPENDENALLKAVANQPVSVAIDAGGSDFQFYSE 149 (229)
T ss_dssp TCBCBTTTSCCCSSCCCCCHHH-----------HTCCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCS
T ss_pred CCccccccCCccCCCCCCCCCC-----------CCCcEEEeeeEEEeCCccHHHHHHHHhcCCEEEEEEeCcHHHhhCCC
Confidence 7999999999999888897543 12345678899999878899999999999999999996679999999
Q ss_pred ceEeCCCCCCCCceEEEEEEeecC-CeeEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccccccccCCCC
Q 012960 276 GIFTGPCSTSLDHAVLIVGYDSEN-GVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTKTGQNP 349 (452)
Q Consensus 276 Giy~~~~~~~~~HaV~IVGyg~~~-g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~~~~~p 349 (452)
|||+.+|+..++|||+|||||+++ |++|||||||||++|||+|||||+|+.+...|+|||+++++||++..+.|
T Consensus 150 Giy~~~c~~~~~HaV~iVGyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~~~~~~ 224 (229)
T 1s4v_A 150 GVFTGSCGTELDHGVAIVGYGTTIDGTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCGIAMEASYPIKKSSNN 224 (229)
T ss_dssp SEECCCCCCCCCEEEEEEEEEECTTSCEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEECCSSCC
T ss_pred cEECCCCCCCCCeEEEEEEeccccCCCCEEEEEeCCCCCccCCcEEEEEcCCCCCCCcCcccccceeeEecCCCC
Confidence 999888888889999999999986 99999999999999999999999999765567999999999999765544
No 15
>2fo5_A Cysteine proteinase EP-B 2; EP-B2, EPB2, EPB, cysteine endoprotease, endopeptidase, LEUP hydrolase; HET: AR7; 2.20A {Hordeum vulgare}
Probab=100.00 E-value=3.2e-64 Score=488.20 Aligned_cols=226 Identities=56% Similarity=1.029 Sum_probs=202.8
Q ss_pred CCCCCeeecCCCCCcccccCCCCCcchHHHHHHHHHHHHHHHHhCCccccChHHHhhhcCCCCCCCCCCchHHHHHHHHH
Q 012960 115 RDVPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIK 194 (452)
Q Consensus 115 ~~lP~s~Dwr~~g~vtpVkdQg~cGsCWAfA~~~alE~~~~~~~~~~~~lS~q~lvdc~~~~~~gC~GG~~~~a~~~~~~ 194 (452)
.+||++||||++|+|+||||||.||||||||++++||++++|+++..++||||+|+||+...+.||+||++..|++|+.+
T Consensus 2 ~~lP~~~DwR~~g~vtpVkdQg~CGSCWAFaa~~alE~~~~i~~g~~~~LSeQ~lvdC~~~~~~GC~GG~~~~a~~yi~~ 81 (262)
T 2fo5_A 2 SDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYIKN 81 (262)
T ss_dssp -CCCSCEETTTTTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCCSSCCGGGCBCHHHHHHHHHH
T ss_pred CCCCCcccCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhhcCCCCCCCCCCCHHHHHHHHHH
Confidence 46999999999999999999999999999999999999999999999999999999998645789999999999999988
Q ss_pred hCCcCCCCCCCCCCCCCCccccccccchhhhhhccccc-eEEeeeeEecCCChHHHHHHHHHcCCeEEEEEcCchhhhcc
Q 012960 195 NHGIDTEKDYPYRGQAGQCNKQKVLHFLTSFVLQLNRH-IVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLY 273 (452)
Q Consensus 195 ~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~~~~~~-~~~i~~~~~i~~~~~~~lk~al~~gPV~v~i~~~~~~f~~Y 273 (452)
++|+++|++|||.+..+.|..... + .... .++|.+|..++.+++++||++|++|||+|+|+++.++|++|
T Consensus 82 ~~Gi~~e~~yPY~~~~~~C~~~~~------~---~~~~~~~~i~~y~~v~~~~e~~ik~al~~GPV~v~i~~~~~~f~~Y 152 (262)
T 2fo5_A 82 NGGLITEAAYPYRAARGTCNVARA------A---QNSPVVVHIDGHQDVPANSEEDLARAVANQPVSVAVEASGKAFMFY 152 (262)
T ss_dssp TTCEEBTTTSCCCSSCCCCCHHHH------H---HHCCCEECCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTC
T ss_pred cCCcCchhcCCCcCccCccCCccc------c---cCCceeEEeceEEEcCCchHHHHHHHHHhCCEEEEEecChHHHhcc
Confidence 779999999999999888975430 0 1234 67889999998788999999999999999999976789999
Q ss_pred CCceEeCCCCCCCCceEEEEEEeec-CCeeEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccccccccCCCC
Q 012960 274 SSGIFTGPCSTSLDHAVLIVGYDSE-NGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTKTGQNP 349 (452)
Q Consensus 274 ~sGiy~~~~~~~~~HaV~IVGyg~~-~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~~~~~p 349 (452)
++|||+.+|++.++|||+|||||++ +|++|||||||||++|||+|||||+|+.+...|+|||++.++||++..+.|
T Consensus 153 ~sGVy~~~c~~~~~HaV~IVGyg~~~~G~~YWivkNSWG~~WGe~GY~ri~r~~n~~~~~CgI~~~~~~p~~~~~~~ 229 (262)
T 2fo5_A 153 SEGVFTGECGTELDHGVAVVGYGVAEDGKAYWTVKNSWGPSWGEQGYIRVEKDSGASGGLCGIAMEASYPVKTYSKP 229 (262)
T ss_dssp CSSEECCCCCCCCCEEEEEEEEEECTTSCEEEEEECSBCTTSTBTTEEEEESSCSCTTCGGGTTTSCEEEECCC---
T ss_pred CCceECCCCCCcCCEEEEEEEEcccCCCceEEEEEeCCCCCCCCCeEEEEEcCCCCCCCccceeeeeeEEEecCCCC
Confidence 9999988888888999999999998 599999999999999999999999999876678999999999999887766
No 16
>1ppo_A Protease omega; hydrolase(thiol protease); 1.80A {Carica papaya} SCOP: d.3.1.1 PDB: 1meg_A*
Probab=100.00 E-value=7.5e-64 Score=473.64 Aligned_cols=215 Identities=53% Similarity=0.999 Sum_probs=197.9
Q ss_pred CCCeeecCCCCCcccccCCCCCcchHHHHHHHHHHHHHHHHhCCccccChHHHhhhcCCCCCCCCCCchHHHHHHHHHhC
Q 012960 117 VPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKNH 196 (452)
Q Consensus 117 lP~s~Dwr~~g~vtpVkdQg~cGsCWAfA~~~alE~~~~~~~~~~~~lS~q~lvdc~~~~~~gC~GG~~~~a~~~~~~~~ 196 (452)
||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||+. .+.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~yi~~~- 78 (216)
T 1ppo_A 1 LPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCER-RSHGCKGGYPPYALEYVAKN- 78 (216)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCS-SSCTTBCCCHHHHHHHHHHH-
T ss_pred CCCcCcCCCCCCCCCCccCCcCccHHHHHHHHHHHHHHHHccCCceecCHHHHHhccC-CCCCCCCCCHHHHHHHHHHh-
Confidence 7999999999999999999999999999999999999999999999999999999986 57899999999999999877
Q ss_pred CcCCCCCCCCCCCCCCccccccccchhhhhhccccceEEeeeeEecCCChHHHHHHHHHcCCeEEEEEcCchhhhccCCc
Q 012960 197 GIDTEKDYPYRGQAGQCNKQKVLHFLTSFVLQLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSSG 276 (452)
Q Consensus 197 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~lk~al~~gPV~v~i~~~~~~f~~Y~sG 276 (452)
||++|++|||.+.++.|.... .....++|.+|..++.+++++||++|++|||+|+|+++.++|++|++|
T Consensus 79 Gi~~e~~yPY~~~~~~C~~~~-----------~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~~~~~~~~f~~Y~~G 147 (216)
T 1ppo_A 79 GIHLRSKYPYKAKQGTCRAKQ-----------VGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRPFQLYKGG 147 (216)
T ss_dssp CBCBTTTSCCCSSCCCCCGGG-----------CCSCCBCCCEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHHCCSS
T ss_pred CcCccccCCccCCCCCcCCCC-----------CCCceEEeccEEEECCCCHHHHHHHHHhCCEEEEEecCChhhhhcCCc
Confidence 899999999999888897653 123456788999998788999999999999999999976799999999
Q ss_pred eEeCCCCCCCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccccccc
Q 012960 277 IFTGPCSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 344 (452)
Q Consensus 277 iy~~~~~~~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 344 (452)
||+.+|++.++|||+|||||+++|++|||||||||++|||+|||||+|+.+...|+|||+++++||++
T Consensus 148 iy~~~~~~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~~~~n~Cgi~~~~~~p~~ 215 (216)
T 1ppo_A 148 IFEGPCGTKVDHAVTAVGYGKSGGKGYILIKNSWGTAWGEKGYIRIKRAPGNSPGVCGLYKSSYYPTK 215 (216)
T ss_dssp EECCSCCSCCCEEEEEEEEEEETTEEEEEEECSBCSSSTBTTEEEEECCCSSSSCGGGTTSCCEEEEC
T ss_pred eECCCCCCCCCEEEEEEEeeccCCccEEEEEeCCCCCcccCcEEEEEcCCCCCCCcCccccceeeEee
Confidence 99888888889999999999999999999999999999999999999997655679999999999985
No 17
>1iwd_A Ervatamin B; cysteine protease, alpha-beta protein, catalytic DYAD, L-DOM domain., hydrolase; 1.63A {Tabernaemontana divaricata} SCOP: d.3.1.1
Probab=100.00 E-value=8.4e-64 Score=472.93 Aligned_cols=214 Identities=54% Similarity=1.067 Sum_probs=197.5
Q ss_pred CCCeeecCCCCCcccccCCCCCcchHHHHHHHHHHHHHHHHhCCccccChHHHhhhcCCCCCCCCCCchHHHHHHHHHhC
Q 012960 117 VPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKNH 196 (452)
Q Consensus 117 lP~s~Dwr~~g~vtpVkdQg~cGsCWAfA~~~alE~~~~~~~~~~~~lS~q~lvdc~~~~~~gC~GG~~~~a~~~~~~~~ 196 (452)
||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||+. .+.||+||++..|++|+.+++
T Consensus 1 lP~~~DwR~~~~v~~VkdQg~cGsCWAfa~~~~~e~~~~i~~g~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~~~~~~~ 79 (215)
T 1iwd_A 1 LPSFVDWRSKGAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCDT-ASHGCNGGWMNNAFQYIITNG 79 (215)
T ss_dssp CCSCEEGGGGTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHHT
T ss_pred CCCcEeCCCCCCCCCcccCCCCchHHHHHHHHHHHHHHHHhcCCccccChhHeEECcC-CCCCCCCCCHHHHHHHHHHhC
Confidence 7999999999999999999999999999999999999999999999999999999986 378999999999999998877
Q ss_pred CcCCCCCCCCCCCCCCccccccccchhhhhhccccceEEeeeeEecCCChHHHHHHHHHcCCeEEEEEcCchhhhccCCc
Q 012960 197 GIDTEKDYPYRGQAGQCNKQKVLHFLTSFVLQLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSSG 276 (452)
Q Consensus 197 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~lk~al~~gPV~v~i~~~~~~f~~Y~sG 276 (452)
|+++|++|||.+.++.|.... ...++|.+|..++..++++||++|++|||+|+|++...+|++|++|
T Consensus 80 Gi~~e~~yPY~~~~~~C~~~~-------------~~~~~i~~~~~v~~~~~~~ik~~l~~GPV~v~i~~~~~~f~~Y~~G 146 (215)
T 1iwd_A 80 GIDTQQNYPYSAVQGSCKPYR-------------LRVVSINGFQRVTRNNESALQSAVASQPVSVTVEAAGAPFQHYSSG 146 (215)
T ss_dssp CBCBTTTSCCCSSCCCCCTTC-------------CCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSS
T ss_pred CcccccccCccCCCCCCCCCC-------------CceEEeCcEEEeCCCcHHHHHHHHHhCCEEEEEecCCcchhhcCCc
Confidence 999999999999888997653 2346788899898788999999999999999999986689999999
Q ss_pred eEeCCCCCCCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccccccc
Q 012960 277 IFTGPCSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 344 (452)
Q Consensus 277 iy~~~~~~~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 344 (452)
||+.+|.+.++|||+|||||+++|++|||||||||++|||+|||||+|+.+...|+|||+++++||++
T Consensus 147 vy~~~c~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 214 (215)
T 1iwd_A 147 IFTGPCGTAQNHGVVIVGYGTQSGKNYWIVRNSWGQNWGNQGYIWMERNVASSAGLCGIAQLPSYPTK 214 (215)
T ss_dssp EECCCCCCCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSCSSTTCGGGTTSSCEEEEC
T ss_pred eECCCCCCcCCEEEEEEEEeccCCccEEEEEeCCCCCcCCCcEEEEEcCCCCCCCCCCccccceeeee
Confidence 99888888889999999999999999999999999999999999999997655579999999999974
No 18
>1yal_A Chymopapain; hydrolase, thiol protease; 1.70A {Carica papaya} SCOP: d.3.1.1 PDB: 1gec_E*
Probab=100.00 E-value=1.3e-63 Score=472.70 Aligned_cols=216 Identities=52% Similarity=0.966 Sum_probs=198.2
Q ss_pred CCCeeecCCCCCcccccCCCCCcchHHHHHHHHHHHHHHHHhCCccccChHHHhhhcCCCCCCCCCCchHHHHHHHHHhC
Q 012960 117 VPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKNH 196 (452)
Q Consensus 117 lP~s~Dwr~~g~vtpVkdQg~cGsCWAfA~~~alE~~~~~~~~~~~~lS~q~lvdc~~~~~~gC~GG~~~~a~~~~~~~~ 196 (452)
||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||.. .+.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~~~~~~- 78 (218)
T 1yal_A 1 YPQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCDK-HSYGCKGGYQTTSLQYVANN- 78 (218)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHH-
T ss_pred CCCcCcCCCCCCCCCCccCccchhHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhcC-CCCCCCCCCHHHHHHHHHHc-
Confidence 7999999999999999999999999999999999999999999999999999999984 57899999999999999876
Q ss_pred CcCCCCCCCCCCCCCCccccccccchhhhhhccccceEEeeeeEecCCChHHHHHHHHHcCCeEEEEEcCchhhhccCCc
Q 012960 197 GIDTEKDYPYRGQAGQCNKQKVLHFLTSFVLQLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSSG 276 (452)
Q Consensus 197 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~lk~al~~gPV~v~i~~~~~~f~~Y~sG 276 (452)
|+++|++|||.+..+.|.... .....++|.+|..++.+++++||++|++|||+|+|+++.++|++|++|
T Consensus 79 Gi~~e~~yPY~~~~~~C~~~~-----------~~~~~~~i~~y~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~G 147 (218)
T 1yal_A 79 GVHTSKVYPYQAKQYKCRATD-----------KPGPKVKITGYKRVPSNCETSFLGALANQPLSVLVEAGGKPFQLYKSG 147 (218)
T ss_dssp CBCBTTTSCCCSSCCCCCGGG-----------CCSCCBCCSEEEECCSSBHHHHHHHHTTSCEEEEECCCSHHHHTCCSS
T ss_pred CCCccccccccCCCCCcccCc-----------CCCceEEEeeEEEeCCCCHHHHHHHHHhCCEEEEEeccchhccccCCc
Confidence 799999999999888897653 123456788999998888999999999999999999976799999999
Q ss_pred eEeCCCCCCCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCCCcccccccccccccc
Q 012960 277 IFTGPCSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTKT 345 (452)
Q Consensus 277 iy~~~~~~~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~~ 345 (452)
||+.+|++.++|||+|||||+++|++|||||||||++|||+|||||+|+.++..|+|||+++++||++.
T Consensus 148 iy~~~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~~ 216 (218)
T 1yal_A 148 VFDGPCGTKLDHAVTAVGYGTSDGKNYIIIKNSWGPNWGEKGYMRLKRQSGNSQGTCGVYKSSYYPFKG 216 (218)
T ss_dssp EECCSCCSCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECCCSBSCCGGGTTSSCEEEECC
T ss_pred eECCCCCCCCCEEEEEEEeeccCCccEEEEEeCCCCCcccCcEEEEECCCCCCCCccccccceeeEEEe
Confidence 998888888899999999999999999999999999999999999999975556799999999999864
No 19
>3pbh_A Procathepsin B; thiol protease, cysteine protease, proenzyme, papain; 2.50A {Homo sapiens} SCOP: d.3.1.1 PDB: 2pbh_A 1pbh_A 1mir_A
Probab=100.00 E-value=5.3e-64 Score=499.85 Aligned_cols=273 Identities=27% Similarity=0.468 Sum_probs=212.1
Q ss_pred HHHHHHHhccCCCCceEEecccCCccchHHhhhhhcCcCCCcccccccCCccccCCCCCCCCCCeeecCCC----CCccc
Q 012960 56 NYAFVTQHNNMGNSSFTLSLNAFADLTHQEFKASFLGFSAASIDHDRRRNASVQSPGNLRDVPASIDWRKK----GAVTE 131 (452)
Q Consensus 56 N~~~I~~~N~~~~~s~~lg~N~fsDlt~eEf~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lP~s~Dwr~~----g~vtp 131 (452)
+.++|++||++ +.+|++++| |+|+|.||++. +++......... ..+. .....+||++||||++ +.|+|
T Consensus 11 ~~~~i~~~N~~-~~~~~~~~n-f~~~~~e~~~~-~lg~~~~~~~~~----~~~~-~~~~~~lP~s~DwR~~~~~c~~vtp 82 (317)
T 3pbh_A 11 SDELVNYVNKR-NTTWQAGHN-FYNVDMSYLKR-LCGTFLGGPKPP----QRVM-FTEDLKLPASFDAREQWPQCPTIKE 82 (317)
T ss_dssp CHHHHHHHHHH-TCSEEECCC-CSSCCHHHHHH-TCCBCTTCCCCS----EEEC-CCSCCCCCSSEEHHHHCTTCGGGTC
T ss_pred cHHHHHHHHCC-CCCeEEeec-cccCCHHHHHH-HcCCCCCccccC----cccc-cccccCCCCCEechhccCCCCCcCC
Confidence 45789999987 889999999 99988877755 466554332110 1111 1223689999999987 68999
Q ss_pred ccCCCCCcchHHHHHHHHHHHHHHHHhCC--ccccChHHHhhhcC-CCCCCCCCCchHHHHHHHHHhCCcCCCCCC----
Q 012960 132 VKDQASCGACWAFSATGAIEGINKIVTGS--LVSLSEQELIDCDR-SYNSGCGGGLMDYAYQFVIKNHGIDTEKDY---- 204 (452)
Q Consensus 132 VkdQg~cGsCWAfA~~~alE~~~~~~~~~--~~~lS~q~lvdc~~-~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~y---- 204 (452)
|||||.||||||||++++||++++|+++. .++||+|+|+||+. ..+.||+||++..|++|++++ ||++|.+|
T Consensus 83 VkdQg~CGSCWAFsa~~ale~~~~i~~~~~~~~~LSeq~LvdC~~~~~~~GC~GG~~~~A~~yi~~~-Gi~te~~Y~~~~ 161 (317)
T 3pbh_A 83 IRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRK-GLVSGGLYESHV 161 (317)
T ss_dssp CCBCCSSCCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHSCTTTBCGGGCBCHHHHHHHHHHT-CEEBBCSTTCCC
T ss_pred ccccCCccchHHHHHHHHHHHHHHHHhCCCCcccCCHHHHHHhccccCCCCCCCCCHHHHHHHHHHh-CCCcchhccCCC
Confidence 99999999999999999999999999874 79999999999986 457899999999999999876 99999998
Q ss_pred ---CCCC---------CCCCccccccccc-----hhhhhhccccceEEeeeeEecCCChHHHHHHHHH-cCCeEEEEEcC
Q 012960 205 ---PYRG---------QAGQCNKQKVLHF-----LTSFVLQLNRHIVTIDGYKDVPENNEKQLLQAVV-AQPVSVGICGS 266 (452)
Q Consensus 205 ---PY~~---------~~~~C~~~~~~~~-----~~~~~~~~~~~~~~i~~~~~i~~~~~~~lk~al~-~gPV~v~i~~~ 266 (452)
||.. ..+.|......+. ...+................++ .++++||++|+ +|||+|+|+++
T Consensus 162 ~c~PY~~~~c~~~~~~~~~~C~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~~v~-~~e~~i~~~i~~~GPV~v~i~~~ 240 (317)
T 3pbh_A 162 GCRPYSIPPCEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVS-NSEKDIMAEIYKNGPVEGAFSVY 240 (317)
T ss_dssp BSSCCCSCCCCCCCTTCCSCCCSCCCCCCCCCSCCSSCCSCGGGSEECBCCCEEEC-SCHHHHHHHHHHHCCEEEEEEEE
T ss_pred CCcCcccCcccccccCcCCCCCCcCCCCcccccccCCCccceeeeeeeeeecccCC-cHHHHHHHHHHHCCCEEEEEEec
Confidence 9984 3455653210000 0001100001111122223454 57899999887 59999999996
Q ss_pred chhhhccCCceEeCCCCCC-CCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCCCcccccccccccc
Q 012960 267 ERAFQLYSSGIFTGPCSTS-LDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPT 343 (452)
Q Consensus 267 ~~~f~~Y~sGiy~~~~~~~-~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~ 343 (452)
++|++|++|||..++... ++|||+|||||+++|++|||||||||++|||+|||||+|+.| +|||++.++..+
T Consensus 241 -~~f~~Y~~GVy~~~~~~~~~~HaV~iVGyG~~~g~~YWivkNSWG~~WGe~GY~ri~rg~n----~CgI~~~~~a~~ 313 (317)
T 3pbh_A 241 -SDFLLYKSGVYQHVTGEMMGGHAIRILGWGVENGTPYWLVANSWNTDWGDNGFFKILRGQD----HCGIESEVVAGI 313 (317)
T ss_dssp -GGGGGEEEEEECCCSCCEEEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSC----GGGTTTSCEECC
T ss_pred -ccccCCCCcEEccCCCCCCCCEEEEEEEEEEeCCeeEEEEEcCCCCCcCCCcEEEEEcCCC----cccCCCceEeee
Confidence 799999999998777664 499999999999999999999999999999999999999864 899999887655
No 20
>3u8e_A Papain-like cysteine protease; papain-like cysteine peptidase, peptidase_C1A, hydrolase, in form; 1.31A {Crocus sativus} SCOP: d.3.1.0
Probab=100.00 E-value=2e-63 Score=472.78 Aligned_cols=214 Identities=56% Similarity=1.052 Sum_probs=192.9
Q ss_pred CCCeeecCCCCCcccccCCCCCcchHHHHHHHHHHHHHHHHhCCccccChHHHhhhcCCCCCCCCCCchHHHHHHHHHhC
Q 012960 117 VPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKNH 196 (452)
Q Consensus 117 lP~s~Dwr~~g~vtpVkdQg~cGsCWAfA~~~alE~~~~~~~~~~~~lS~q~lvdc~~~~~~gC~GG~~~~a~~~~~~~~ 196 (452)
||++||||++|+|+||||||.||||||||++++||++++++++..++||||+|+||+.. +.||+||++..|++|+.+++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGSCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~~-~~gC~GG~~~~a~~~~~~~~ 79 (222)
T 3u8e_A 1 APASIDWRKKGAVTSVKDQGACGMCWAFGATGAIEGIDAITTGRLISVSEQQIVDCDTX-XXXXXGGDADDAFRWVITNG 79 (222)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSCSSCTTTTHHHHHHHHHHHHHSCCCCBCHHHHHHHCC-------CCCHHHHHHHHHHHT
T ss_pred CCCcCcCCcCCCCCCcccCCCCccHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhccCc-ccccCCCCHHHHHHHHHHcC
Confidence 79999999999999999999999999999999999999999999999999999999974 88999999999999998877
Q ss_pred CcCCCCCCCCCCCCCCccccccccchhhhhhccccceEEeeeeEecCCChHHHHHHHHHcCCeEEEEEcCchhhhccCC-
Q 012960 197 GIDTEKDYPYRGQAGQCNKQKVLHFLTSFVLQLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSS- 275 (452)
Q Consensus 197 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~lk~al~~gPV~v~i~~~~~~f~~Y~s- 275 (452)
||++|++|||.+.++.|.... .. .++|.+|..++ .++++||++|++|||+|+|++...+|++|++
T Consensus 80 Gi~~e~~yPY~~~~~~C~~~~-----------~~--~~~i~~~~~v~-~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~~ 145 (222)
T 3u8e_A 80 GIASDANYPYTGVDGTCDLNK-----------PI--AARIDGYTNVP-NSSSALLDAVAKQPVSVNIYTSSTSFQLYTGP 145 (222)
T ss_dssp CBCBTTTSCCCSSCCCCCCCS-----------CC--CBCCCEEEECC-SCHHHHHHHHHHSCEEEEECCCSHHHHTCCCS
T ss_pred CccchhcCCCcccCCccccCC-----------CC--eEEEccEEEeC-CcHHHHHHHHhCCCEEEEEEecChhhhcEeCC
Confidence 999999999999999998665 11 56788999998 7899999999889999999998669999999
Q ss_pred ceEeC-CCCC---CCCceEEEEEEeecC-CeeEEEEEcCCCCCCCCCcEEEEEecCCCCCCcccccccccccccc
Q 012960 276 GIFTG-PCST---SLDHAVLIVGYDSEN-GVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTKT 345 (452)
Q Consensus 276 Giy~~-~~~~---~~~HaV~IVGyg~~~-g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~~ 345 (452)
|||+. .|.. .++|||+|||||+++ |++|||||||||++|||+|||||+|+.++..|+|||+++++||++.
T Consensus 146 Giy~~~~~~~~~~~~~HaV~iVGyg~~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~~~~~g~Cgi~~~~~~p~~~ 220 (222)
T 3u8e_A 146 GIFAGSSCSDDPATVDHTVLIVGYGSNGTNADYWIVKNSWGTEWGIDGYILIRRNTNRPDGVCAIDAWGSYPTKS 220 (222)
T ss_dssp SCBCCTTCCCCGGGCCEEEEEEEEEESSTTCEEEEEECSBCTTSTBTTEEEEECSCSCTTCGGGTTSSCEEEECC
T ss_pred ceECCCcccCCCCcCCEEEEEEEEeecCCCCcEEEEECCCCCCcccCCEEEEEcCCCCCCCcCCccccceEEEEe
Confidence 99976 6766 689999999999987 9999999999999999999999999987677899999999999864
No 21
>2b1m_A SPE31; papain-like, sugar binding protein; HET: NAG FUC PG4; 2.00A {Pachyrhizus erosus} PDB: 2b1n_A*
Probab=100.00 E-value=8.4e-63 Score=475.03 Aligned_cols=221 Identities=51% Similarity=0.944 Sum_probs=196.6
Q ss_pred CCCCeeecCCCCCcccccCCCCCcchHHHHHHHHHHHHHHHHhCCccccChHHHhhhcCCCCCCCCCCchHHHHHHHHHh
Q 012960 116 DVPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKN 195 (452)
Q Consensus 116 ~lP~s~Dwr~~g~vtpVkdQg~cGsCWAfA~~~alE~~~~~~~~~~~~lS~q~lvdc~~~~~~gC~GG~~~~a~~~~~~~ 195 (452)
+||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||+. .+.||+||++..|++|+.++
T Consensus 1 ~lP~~~DwR~~g~vtpVkdQg~CGsCWAfa~~~~lE~~~~i~~g~~~~LS~q~lvdC~~-~~~gC~GG~~~~a~~y~~~~ 79 (246)
T 2b1m_A 1 DAPESWDWSKKGVITKVKFQGQCGSGWAFSATGAIEAAHAIATGNLVSLSEQELIDCVD-ESEGCYNGWHYQSFEWVVKH 79 (246)
T ss_dssp -CCSCEEGGGTTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSBTTTBCCHHHHHHHHHHT
T ss_pred CCCCcCCCCCCCCCCCcccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHhhcC-CCCCCCCCCHHHHHHHHHHh
Confidence 48999999999999999999999999999999999999999999999999999999986 57899999999999999887
Q ss_pred CCcCCCCCCCCCCCCCCccccccccchhhhhhccccceEEeeee---EecCCChHHHHHHHHHc----CCeEEEEEcCch
Q 012960 196 HGIDTEKDYPYRGQAGQCNKQKVLHFLTSFVLQLNRHIVTIDGY---KDVPENNEKQLLQAVVA----QPVSVGICGSER 268 (452)
Q Consensus 196 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~~~~~~~~~i~~~---~~i~~~~~~~lk~al~~----gPV~v~i~~~~~ 268 (452)
+|+++|++|||.+.++.|.... ....++|++| ..++.+++++||++|++ |||+|+|++ +
T Consensus 80 ~Gi~~e~~yPY~~~~~~C~~~~------------~~~~~~i~~y~~~~~v~~~~~~~ik~~l~~~~~~GPV~v~i~~--~ 145 (246)
T 2b1m_A 80 GGIASEADYPYKARDGKCKANE------------IQDKVTIDNYGVQILSNESTESEAESSLQSFVLEQPISVSIDA--K 145 (246)
T ss_dssp TCBCBTTTSCCCSSCCCCCGGG------------CCCCBCCSEEEEEECCTTSCHHHHHHHHHHHHHHSCEEEEECC--T
T ss_pred CCcCccccccccCCCCcCcCCC------------CCCceeEcCcceeeecCCChHHHHHHHHHhhccCCCEEEEEEc--c
Confidence 7999999999999988997653 2334577888 78887789999999987 999999998 6
Q ss_pred hhhccCCceEeC-CCCCC--CCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCCCcccccccccccccc
Q 012960 269 AFQLYSSGIFTG-PCSTS--LDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTKT 345 (452)
Q Consensus 269 ~f~~Y~sGiy~~-~~~~~--~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~~ 345 (452)
+|++|++|||+. .|+.. ++|||+|||||+++|++|||||||||++|||+|||||+|+.++..|+|||++.++||++.
T Consensus 146 ~f~~Y~~Giy~~~~c~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~n~CgI~~~~~~p~~~ 225 (246)
T 2b1m_A 146 DFHFYSGGIYDGGNCSSPYGINHFVLIVGYGSEDGVDYWIAKNSWGEDWGIDGYIRIQRNTGNLLGVCGMNYFASYPIIE 225 (246)
T ss_dssp TGGGCCSSEECCTTCCSSCCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECCSSCTTCGGGTTSEEEEEECC
T ss_pred hhhcccceeecCCCCCCCCcCceEEEEEEEeccCCceEEEEEeCCCCcccCCcEEEEEcCCCCCCccccccceeeEEEec
Confidence 899999999976 67764 899999999999999999999999999999999999999975556799999999999987
Q ss_pred CCCCCC
Q 012960 346 GQNPPP 351 (452)
Q Consensus 346 ~~~p~~ 351 (452)
.+.|..
T Consensus 226 ~~~~~~ 231 (246)
T 2b1m_A 226 KSETLK 231 (246)
T ss_dssp C-----
T ss_pred CCCCCC
Confidence 654443
No 22
>3kwz_A Cathepsin K; enzyme inhibitor, covalent reversible inhibitor, disease mutation, disulfide bond, glycoprotein, hydrolase, lysosome, protease; HET: KWZ; 1.49A {Homo sapiens} PDB: 1au0_A* 1au2_A* 1au3_A* 1au4_A* 1ayu_A* 1ayv_A* 1ayw_A* 1bgo_A* 1atk_A* 1nl6_A* 1nlj_A* 1q6k_A* 1mem_A* 1yk7_A* 1yk8_A* 1yt7_A* 2ato_A* 2aux_A* 2auz_A* 2bdl_A* ...
Probab=100.00 E-value=1.5e-62 Score=464.49 Aligned_cols=212 Identities=51% Similarity=0.940 Sum_probs=194.8
Q ss_pred CCCeeecCCCCCcccccCCCCCcchHHHHHHHHHHHHHHHHhCCccccChHHHhhhcCCCCCCCCCCchHHHHHHHHHhC
Q 012960 117 VPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKNH 196 (452)
Q Consensus 117 lP~s~Dwr~~g~vtpVkdQg~cGsCWAfA~~~alE~~~~~~~~~~~~lS~q~lvdc~~~~~~gC~GG~~~~a~~~~~~~~ 196 (452)
||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||.. .+.||+||++..|++|+.+++
T Consensus 1 lP~~~Dwr~~~~v~pvkdQg~cGsCWAfa~~~~~e~~~~~~~~~~~~lS~q~l~dc~~-~~~gC~GG~~~~a~~~~~~~~ 79 (215)
T 3kwz_A 1 APDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVS-ENDGCGGGYMTNAFQYVQKNR 79 (215)
T ss_dssp CTTCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHHT
T ss_pred CCCCCccCcCCCCCCcccCCCCcHHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcC-CCCCCCCCCHHHHHHHHHHhC
Confidence 7999999999999999999999999999999999999999999999999999999997 588999999999999998888
Q ss_pred CcCCCCCCCCCCCCCCccccccccchhhhhhccccceEEeeeeEecCCChHHHHHHHHHc-CCeEEEEEcCchhhhccCC
Q 012960 197 GIDTEKDYPYRGQAGQCNKQKVLHFLTSFVLQLNRHIVTIDGYKDVPENNEKQLLQAVVA-QPVSVGICGSERAFQLYSS 275 (452)
Q Consensus 197 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~lk~al~~-gPV~v~i~~~~~~f~~Y~s 275 (452)
|+++|++|||.+.++.|.... .....++.+|..++..++++||++|++ |||+|+|++..++|++|++
T Consensus 80 Gi~~e~~yPY~~~~~~C~~~~------------~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y~~ 147 (215)
T 3kwz_A 80 GIDSEDAYPYVGQEESCMYNP------------TGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSK 147 (215)
T ss_dssp CEEBTTTSCCCSSCCCCCCCG------------GGEEECCCCEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHTCCS
T ss_pred CccccccCCCccCCCccccCC------------CCceeEecceEEeCCCCHHHHHHHHHHCCCEEEEEeechhhhhcccC
Confidence 999999999999989998654 345578889999987789999999986 9999999997679999999
Q ss_pred ceEe-CCCC-CCCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccccccc
Q 012960 276 GIFT-GPCS-TSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 344 (452)
Q Consensus 276 Giy~-~~~~-~~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 344 (452)
|||. +.|. ..++|||+|||||+++|++|||||||||++|||+|||||+|+.+ |+|||++.++||++
T Consensus 148 Giy~~~~~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WG~~Gy~~i~r~~~---n~Cgi~~~~~~p~~ 215 (215)
T 3kwz_A 148 GVYYDESCNSDNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKN---NACGIANLASFPKM 215 (215)
T ss_dssp SEECCTTCCTTCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEESSSS---SGGGTTSSCEEECC
T ss_pred CeECCCCCCCChhhCEEEEEEEeccCCceEEEEECCcCcccccCCEEEEecCCC---CccCcCCceeeeeC
Confidence 9995 4564 46899999999999999999999999999999999999999864 49999999999974
No 23
>2cio_A Papain; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Carica papaya} PDB: 1khq_A 1khp_A 1ppn_A 3e1z_B 3ima_A 3lfy_A 9pap_A 1bqi_A* 1bp4_A* 1pad_A 1pe6_A* 1pip_A* 1pop_A* 1ppd_A 1ppp_A* 1stf_E* 2pad_A 4pad_A* 5pad_A* 6pad_A* ...
Probab=100.00 E-value=1.7e-62 Score=463.13 Aligned_cols=211 Identities=50% Similarity=0.916 Sum_probs=193.1
Q ss_pred CCCeeecCCCCCcccccCCCCCcchHHHHHHHHHHHHHHHHhCCccccChHHHhhhcCCCCCCCCCCchHHHHHHHHHhC
Q 012960 117 VPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKNH 196 (452)
Q Consensus 117 lP~s~Dwr~~g~vtpVkdQg~cGsCWAfA~~~alE~~~~~~~~~~~~lS~q~lvdc~~~~~~gC~GG~~~~a~~~~~~~~ 196 (452)
||++||||++|+|+||||||.||||||||++++||++++++++..++||||+|+||+. .+.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~CGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~yi~~~- 78 (212)
T 2cio_A 1 IPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNQYSEQELLDCDR-RSYGCNGGYPWSALQLVAQY- 78 (212)
T ss_dssp CCSCEETTTTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHT-
T ss_pred CCCcccCCCCCCCCCCccCCccchHHHHHHHHHHHHHHHHhcCCccccCHHHHHHhCC-CCCCCCCCCHHHHHHHHHHh-
Confidence 7999999999999999999999999999999999999999999999999999999986 57899999999999999776
Q ss_pred CcCCCCCCCCCCCCCCccccccccchhhhhhccccceEEeeeeEecCCChHHHHHHHHHcCCeEEEEEcCchhhhccCCc
Q 012960 197 GIDTEKDYPYRGQAGQCNKQKVLHFLTSFVLQLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSSG 276 (452)
Q Consensus 197 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~lk~al~~gPV~v~i~~~~~~f~~Y~sG 276 (452)
|+++|++|||.+.++.|.... .....++|.+|..++..++++||++|++|||+|+|++...+|++|++|
T Consensus 79 Gi~~e~~yPY~~~~~~C~~~~-----------~~~~~~~i~~~~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~G 147 (212)
T 2cio_A 79 GIHYRNTYPYEGVQRYCRSRE-----------KGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAGKDFQLYRGG 147 (212)
T ss_dssp CBCBTTTSCCCSSCCCCCTTT-----------TCSCSBCCSEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHTCCSS
T ss_pred CcCcccccCCcCCCCCcCCCC-----------CCCceEEEeeEEEeCCccHHHHHHHHHhCCEEEEEeccCcchhhcCCc
Confidence 899999999999888897653 123456788999998778999999999999999999976689999999
Q ss_pred eEeCCCCCCCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccccccc
Q 012960 277 IFTGPCSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 344 (452)
Q Consensus 277 iy~~~~~~~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 344 (452)
||+.+|++.++|||+|||||+ +|||||||||++|||+|||||+|+.+...|+|||+++++||++
T Consensus 148 vy~~~~~~~~~HaV~iVGyg~----~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~ 211 (212)
T 2cio_A 148 IFVGPCGNKVDHAVAAVGYGP----NYILIKNSWGTGWGENGYIRIKRGTGNSYGVCGLYTSSFYPVK 211 (212)
T ss_dssp EECCCCCSCCCEEEEEEEEET----TEEEEECSBCTTSTBTTEEEEECSSSCTTCGGGTTSCCEEEEC
T ss_pred eecCCCCCCCCEEEEEEEecC----CeEEEEeCCCCCcccCcEEEEEcCCCCCCCccCcccceeEEEe
Confidence 998888888899999999998 8999999999999999999999997555679999999999984
No 24
>2bdz_A Mexicain; cysteine protease, peptidase_C1, papain-like, HYDR; HET: E64; 2.10A {Jacaratia mexicana}
Probab=100.00 E-value=2.3e-62 Score=462.79 Aligned_cols=212 Identities=51% Similarity=0.990 Sum_probs=195.5
Q ss_pred CCCeeecCCCCCcccccCCCCCcchHHHHHHHHHHHHHHHHhCCccccChHHHhhhcCCCCCCCCCCchHHHHHHHHHhC
Q 012960 117 VPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKNH 196 (452)
Q Consensus 117 lP~s~Dwr~~g~vtpVkdQg~cGsCWAfA~~~alE~~~~~~~~~~~~lS~q~lvdc~~~~~~gC~GG~~~~a~~~~~~~~ 196 (452)
||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||.. .+.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~y~~~~- 78 (214)
T 2bdz_A 1 YPESIDWREKGAVTPVKNQNPCGSCWAFSTVATIEGINKIITGQLISLSEQELLDCER-RSHGCDGGYQTTSLQYVVDN- 78 (214)
T ss_dssp CCSCEETTTTTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCBCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHH-
T ss_pred CCCcEeCCCCCCCCCCccCCCCccHHHHHhHHHHHHHHHHhcCCccccCHHHHHhhcC-CCCCCCCCCHHHHHHHHHHh-
Confidence 7999999999999999999999999999999999999999999999999999999986 57899999999999999887
Q ss_pred CcCCCCCCCCCCCCCCccccccccchhhhhhccccceEEeeeeEecCCChHHHHHHHHHcCCeEEEEEcCchhhhccCCc
Q 012960 197 GIDTEKDYPYRGQAGQCNKQKVLHFLTSFVLQLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSSG 276 (452)
Q Consensus 197 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~lk~al~~gPV~v~i~~~~~~f~~Y~sG 276 (452)
|+++|++|||.+..+.|.... .....++|++|..++.+++++||++|++|||+|+|++..++|++|++|
T Consensus 79 Gi~~e~~yPY~~~~~~C~~~~-----------~~~~~~~i~~y~~v~~~~~~~i~~~l~~gPV~v~i~~~~~~f~~Y~~G 147 (214)
T 2bdz_A 79 GVHTEREYPYEKKQGRCRAKD-----------KKGPKVYITGYKYVPANDEISLIQAIANQPVSVVTDSRGRGFQFYKGG 147 (214)
T ss_dssp CEEBTTTSCCCSSCCCCCTTT-----------CCSCEECCCEEEEECSSBHHHHHHHHHHSCEEEEECCCSHHHHTCCSS
T ss_pred CCCccccCCCCCCCCCCCCCC-----------CCCceeeecCEEEeCCCcHHHHHHHHHhCCEEEEEeeChhHhhcccCc
Confidence 999999999999888897654 223567889999998888999999999999999999976789999999
Q ss_pred eEeCCCCCCCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCCCcccccccccccccc
Q 012960 277 IFTGPCSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTKT 345 (452)
Q Consensus 277 iy~~~~~~~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~~ 345 (452)
||+.+|.+.++|||+|||||+ +|||||||||++|||+|||||+|+.+...|+|||++.++||+..
T Consensus 148 iy~~~~~~~~~HaV~iVGyg~----~yWivkNSWG~~WGe~Gy~~i~~~~~~~~~~Cgi~~~~~~p~~~ 212 (214)
T 2bdz_A 148 IYEGPCGTNTDHAVTAVGYGK----TYLLLKNSWGPNWGEKGYIRIKRASGRSKGTCGVYTSSFFPIKG 212 (214)
T ss_dssp EECCSCCSCCCEEEEEEEECS----SEEEEECSBCTTSTBTTEEEEECCCSBSSCGGGTTSCEEEEECC
T ss_pred eecCCCCCCCCeEEEEEEcCC----CeEEEEeCCCCCcccCCEEEEEcCCCCCCCcccccccceEEEec
Confidence 998888888999999999998 89999999999999999999999975555799999999999864
No 25
>3ioq_A CMS1MS2; caricaceae, cysteine protease, papain family, hydrolase; HET: E64 SO4; 1.87A {Carica candamarcensis} SCOP: d.3.1.1
Probab=100.00 E-value=2e-62 Score=462.98 Aligned_cols=211 Identities=53% Similarity=0.994 Sum_probs=195.0
Q ss_pred CCCeeecCCCCCcccccCCCCCcchHHHHHHHHHHHHHHHHhCCccccChHHHhhhcCCCCCCCCCCchHHHHHHHHHhC
Q 012960 117 VPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKNH 196 (452)
Q Consensus 117 lP~s~Dwr~~g~vtpVkdQg~cGsCWAfA~~~alE~~~~~~~~~~~~lS~q~lvdc~~~~~~gC~GG~~~~a~~~~~~~~ 196 (452)
||++||||++|+||||||||.||||||||++++||++++++++..++||||+|+||.. .+.||+||++..|++|+.++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~~~~~~- 78 (213)
T 3ioq_A 1 IPTSIDWRQKGAVTPVRNQGGCGSCWTFSSVAAVEGINKIVTGQLLSLSEQELLDCER-RSYGCRGGFPLYALQYVANS- 78 (213)
T ss_dssp CCSCEEGGGGTCCCCCCBCTTSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHH-
T ss_pred CCCCCCcccCCCCCCCCcCCCChhHHHHHHHHHHHHHHHHHcCCCcccCHHHhhhhcC-CCCCCCCCCHHHHHHHHHHc-
Confidence 7999999999999999999999999999999999999999999999999999999997 57899999999999999887
Q ss_pred CcCCCCCCCCCCCCCCccccccccchhhhhhccccceEEeeeeEecCCChHHHHHHHHHcCCeEEEEEcCchhhhccCCc
Q 012960 197 GIDTEKDYPYRGQAGQCNKQKVLHFLTSFVLQLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSSG 276 (452)
Q Consensus 197 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~lk~al~~gPV~v~i~~~~~~f~~Y~sG 276 (452)
|+++|++|||.+..+.|.... .....++|.+|..++.++++.|+++|++|||+|+|+++.++|+.|++|
T Consensus 79 Gi~~e~~yPY~~~~~~C~~~~-----------~~~~~~~i~~~~~v~~~~~~~~~~~~~~GPV~v~i~~~~~~f~~y~~G 147 (213)
T 3ioq_A 79 GIHLRQYYPYEGVQRQCRASQ-----------AKGPKVKTDGVGRVPRNNEQALIQRIAIQPVSIVVEAKGRAFQNYRGG 147 (213)
T ss_dssp CEEBGGGSCCCSSCCCCCGGG-----------CCSCEECCCEEEECCSSCHHHHHHHHTTSCEEEEECCCSHHHHTCCSS
T ss_pred CCCchhccCcCCCCCCCCCCc-----------cCCceEEeccEEEeCCchHHHHHHHHHhCCEEEEEEechhhhhhccCC
Confidence 999999999999989998643 234567889999998888888999998999999999976799999999
Q ss_pred eEeCCCCCCCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccccccc
Q 012960 277 IFTGPCSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 344 (452)
Q Consensus 277 iy~~~~~~~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 344 (452)
||+..|.+.++|||+|||||+ +|||||||||++|||+|||||+|+.+...|+|||+++++||++
T Consensus 148 iy~~~~~~~~~HaV~iVGyg~----~yWivkNSWG~~WGe~Gy~~i~r~~~~~~~~Cgi~~~~~~p~~ 211 (213)
T 3ioq_A 148 IFAGPCGTSIDHAVAAVGYGN----DYILIKNSWGTGWGEGGYIRIKRGSGNPQGACGVLSDSVFPTK 211 (213)
T ss_dssp EECCSCCSCCCEEEEEEEEET----TEEEEECSBCTTSTBTTEEEEESSCSSTTCGGGTTSCCEEEEC
T ss_pred eEcCCCCCccCceEEEEecCC----CeEEEECCCCCCcccCCeEEEEcCCCCCCCcccccCcceEeEe
Confidence 998888888999999999996 7999999999999999999999998655679999999999985
No 26
>3ovx_A Cathepsin S; hydrolase, covalent inhibitor, aldehyde warhead is covalently bound to Cys25, lysosomeal protein; HET: O64; 1.49A {Homo sapiens} SCOP: d.3.1.1 PDB: 2h7j_A* 2f1g_A* 2hh5_B* 2hhn_A* 2hxz_A* 2op3_A* 2frq_A* 2fra_A* 2fq9_A* 2ft2_A* 2fud_A* 2g7y_A* 1ms6_A* 2r9m_A* 2r9n_A* 2r9o_A* 3n3g_A* 3n4c_A* 3mpe_A* 1nqc_A* ...
Probab=100.00 E-value=2.6e-62 Score=463.87 Aligned_cols=213 Identities=47% Similarity=0.943 Sum_probs=195.3
Q ss_pred CCCeeecCCCCCcccccCCCCCcchHHHHHHHHHHHHHHHHhCCccccChHHHhhhc-CC-CCCCCCCCchHHHHHHHHH
Q 012960 117 VPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCD-RS-YNSGCGGGLMDYAYQFVIK 194 (452)
Q Consensus 117 lP~s~Dwr~~g~vtpVkdQg~cGsCWAfA~~~alE~~~~~~~~~~~~lS~q~lvdc~-~~-~~~gC~GG~~~~a~~~~~~ 194 (452)
||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||+ .. .+.||+||++..|++|+++
T Consensus 2 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~~gC~GG~~~~a~~~~~~ 81 (218)
T 3ovx_A 2 LPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIID 81 (218)
T ss_dssp CCSCEEGGGGTCCCCCCBCTTSCCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHSCGGGTCCGGGCCCHHHHHHHHHH
T ss_pred CCCCCCcccCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHcCCccccCHHHheeccCCcCCCCCCCCCCHHHHHHHHHH
Confidence 799999999999999999999999999999999999999999999999999999998 32 3789999999999999988
Q ss_pred hCCcCCCCCCCCCCCCCCccccccccchhhhhhccccceEEeeeeEecCCChHHHHHHHHHc-CCeEEEEEcCchhhhcc
Q 012960 195 NHGIDTEKDYPYRGQAGQCNKQKVLHFLTSFVLQLNRHIVTIDGYKDVPENNEKQLLQAVVA-QPVSVGICGSERAFQLY 273 (452)
Q Consensus 195 ~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~lk~al~~-gPV~v~i~~~~~~f~~Y 273 (452)
++|+++|++|||.+.++.|.... .....++.+|..++..++++||++|++ |||+|+|++..++|++|
T Consensus 82 ~~Gi~~e~~yPY~~~~~~C~~~~------------~~~~~~i~~~~~~~~~~~~~ik~~l~~~gPV~v~~~~~~~~f~~y 149 (218)
T 3ovx_A 82 NKGIDSDASYPYKAMDQKCQYDS------------KYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLY 149 (218)
T ss_dssp HTCEEBTTTSCCCSSCCCCCCCG------------GGEEECCCEEEECCTTCHHHHHHHHHHTCCEEEEECCCSHHHHHC
T ss_pred hCCcCcccccCccCCCCcccCCC------------ccceeeeccEEEeCCCCHHHHHHHHHhcCCEEEEEEecchhhhcc
Confidence 78999999999999999998654 345577889999987789999999986 89999999987799999
Q ss_pred CCceEeC-CCCCCCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccccccc
Q 012960 274 SSGIFTG-PCSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 344 (452)
Q Consensus 274 ~sGiy~~-~~~~~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 344 (452)
++|||+. .|...++|||+|||||+++|++|||||||||++|||+|||||+|+.+ |+|||++.++||++
T Consensus 150 ~~Giy~~~~~~~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~---n~cgi~~~~~~p~~ 218 (218)
T 3ovx_A 150 RSGVYYEPSCTQNVNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRMARNKG---NHCGIASFPSYPEI 218 (218)
T ss_dssp CSSEECCTTCCSCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSS---SGGGTTTSCEEEEC
T ss_pred cCceecCCCCCcccCcEEEEEEEeccCCceEEEEECCCCCccccCCEEEEecCCC---CcccccCceeeeeC
Confidence 9999964 57778899999999999999999999999999999999999999863 49999999999974
No 27
>1o0e_A Ervatamin C; plant cysteine protease, two domain, stable at PH 2-12, HYDR; 1.90A {Tabernaemontana divaricata} SCOP: d.3.1.1 PDB: 2pns_A* 2pre_A* 3bcn_A*
Probab=100.00 E-value=5.6e-62 Score=458.13 Aligned_cols=207 Identities=57% Similarity=1.094 Sum_probs=190.3
Q ss_pred CCCeeecCCCCCcccccCCCCCcchHHHHHHHHHHHHHHHHhCCccccChHHHhhhcCCCCCCCCCCchHHHHHHHHHhC
Q 012960 117 VPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKNH 196 (452)
Q Consensus 117 lP~s~Dwr~~g~vtpVkdQg~cGsCWAfA~~~alE~~~~~~~~~~~~lS~q~lvdc~~~~~~gC~GG~~~~a~~~~~~~~ 196 (452)
||++||||++|+|+||||||.||||||||++++||++++++++..++||||+|+||.. .+.||+||++..|++|+.+++
T Consensus 1 lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~y~~~~~ 79 (208)
T 1o0e_A 1 LPEQIDWRKKGAVTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCDK-KNHGCLGGAFVFAYQYIINNG 79 (208)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCT-TSCTTBCCCHHHHHHHHHHHT
T ss_pred CCCcCcCCCCCCCCCCccCCCCccHHHHHHHHHHHHHHHHhcCCceecCHHHhhhhcC-CCCCCCCCCHHHHHHHHHHhC
Confidence 7999999999999999999999999999999999999999999999999999999986 578999999999999998877
Q ss_pred CcCCCCCCCCCCCCCCccccccccchhhhhhccccceEEeeeeEecCCChHHHHHHHHHcCCeEEEEEcCchhhhccCCc
Q 012960 197 GIDTEKDYPYRGQAGQCNKQKVLHFLTSFVLQLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLYSSG 276 (452)
Q Consensus 197 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~lk~al~~gPV~v~i~~~~~~f~~Y~sG 276 (452)
|+++|++|||.+.++.|.. . ...++|.+|..++.+++++||++|++|||+|+|++...+|++|++|
T Consensus 80 Gi~~e~~yPY~~~~~~C~~-~-------------~~~~~i~~~~~v~~~~~~~i~~~l~~GPV~v~i~~~~~~f~~Y~~G 145 (208)
T 1o0e_A 80 GIDTQANYPYKAVQGPCQA-A-------------SKVVSIDGYNGVPFCNEXALKQAVAVQPSTVAIDASSAQFQQYSSG 145 (208)
T ss_dssp CBCBTTTSCCCSSCCCCCC-C-------------CCCBCCCEEEECCTTCHHHHHHHHHHSCEEEEECCCSHHHHTCCSS
T ss_pred CcCcccccCccCCCCcCCC-C-------------CceEEeCeEEEeCCCCHHHHHHHHHhCCEEEEEEccCcccccccCc
Confidence 9999999999998888875 1 1235678888888778999999999999999999976689999999
Q ss_pred eEeCCCCCCCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccccccc
Q 012960 277 IFTGPCSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 344 (452)
Q Consensus 277 iy~~~~~~~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 344 (452)
||+.+|++.++|||+|||||+ +|||||||||++|||+|||||+|+.+ .|+|||+++++||++
T Consensus 146 vy~~~c~~~~~HaV~iVGyg~----~yWivkNSWG~~WGe~Gy~~i~~~~~--~~~Cgi~~~~~~p~~ 207 (208)
T 1o0e_A 146 IFSGPCGTKLNHGVTIVGYQA----NYWIVRNSWGRYWGEKGYIRMLRVGG--CGLCGIARLPYYPTK 207 (208)
T ss_dssp EECCCCCSCCCEEEEEEEECS----SEEEEECSBCTTSTBTTEEEEECCST--TCGGGTTSSCEEEEC
T ss_pred eECCCCCCcCCEEEEEEEeCC----CeEEEEcCCCCcccCCcEEEEEcCCC--CCcCCCcccceeeec
Confidence 998888888899999999998 89999999999999999999999863 358999999999985
No 28
>3f75_A Toxopain-2, cathepsin L protease; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii} SCOP: d.3.1.0
Probab=100.00 E-value=1.9e-62 Score=466.72 Aligned_cols=217 Identities=47% Similarity=0.947 Sum_probs=198.2
Q ss_pred CCCCCeeecCCCCCcccccCCCCCcchHHHHHHHHHHHHHHHHhCCccccChHHHhhhcCCC-CCCCCCCchHHHHHHHH
Q 012960 115 RDVPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSY-NSGCGGGLMDYAYQFVI 193 (452)
Q Consensus 115 ~~lP~s~Dwr~~g~vtpVkdQg~cGsCWAfA~~~alE~~~~~~~~~~~~lS~q~lvdc~~~~-~~gC~GG~~~~a~~~~~ 193 (452)
.+||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||.... +.||+||++..|++|+.
T Consensus 5 ~~lP~~~Dwr~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~~c~~~~~~~gC~GG~~~~a~~~~~ 84 (224)
T 3f75_A 5 SELPAGVDWRSRGCVTPVKDQRDCGSCWAFSTTGALEGAHCAKTGKLVSLSEQELMDCSRAEGNQSCSGGEMNDAFQYVL 84 (224)
T ss_dssp GGSCSCEEHHHHTCCCCCCBCCSSSCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCGGGTCCGGGCBCHHHHHHHHH
T ss_pred cCCCCceecccCCCCCCCccCCCCccHHHHHHHHHHHHHHHHhcCCCceeCHHHHhhcccCCCCCCCCCCCHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999999998643 78999999999999998
Q ss_pred HhCCcCCCCCCCCCCCCCCccccccccchhhhhhccccceEEeeeeEecCCChHHHHHHHHHcCCeEEEEEcCchhhhcc
Q 012960 194 KNHGIDTEKDYPYRGQAGQCNKQKVLHFLTSFVLQLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQLY 273 (452)
Q Consensus 194 ~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~lk~al~~gPV~v~i~~~~~~f~~Y 273 (452)
+++||++|++|||.+.++.|.... .....+|.+|..++..++++||++|++|||+|+|++..++|++|
T Consensus 85 ~~~Gi~~e~~yPY~~~~~~C~~~~------------~~~~~~i~~~~~~~~~~~~~l~~~l~~gPV~v~i~~~~~~f~~y 152 (224)
T 3f75_A 85 DSGGICSEDAYPYLARDEECRAQS------------CEKVVKILGFKDVPRRSEAAMKAALAKSPVSIAIEADQMPFQFY 152 (224)
T ss_dssp HHTCBCBTTTSCCCSSCCCCCGGG------------SCCCBCCSEEEECCSSCHHHHHHHHHHSCEEEEECCCSHHHHTE
T ss_pred HhCCccccccCCCcCCCCCCCcCC------------CCceEEeccEEEeCCChHHHHHHHHcCCCEEEEEeccchhhhcC
Confidence 867999999999999988997654 23345688899998788999999999999999999986799999
Q ss_pred CCceEeCCCCCCCCceEEEEEEeec--CCeeEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccccccc
Q 012960 274 SSGIFTGPCSTSLDHAVLIVGYDSE--NGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 344 (452)
Q Consensus 274 ~sGiy~~~~~~~~~HaV~IVGyg~~--~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 344 (452)
++|||++.|...++|||+|||||++ +|++|||||||||++|||+|||||+|+.+ ..|+|||+++++||++
T Consensus 153 ~~Giy~~~~~~~~~Hav~iVGyg~~~~~g~~ywivkNSWG~~WG~~Gy~~i~~~~~-~~~~cgi~~~~~~p~~ 224 (224)
T 3f75_A 153 HEGVFDASCGTDLDHGVLLVGYGTDKESKKDFWIMKNSWGTGWGRDGYMYMAMHKG-EEGQCGLLLDASFPVM 224 (224)
T ss_dssp EEEEECCCCCCCCCEEEEEEEEEEETTTTEEEEEEECSBCTTSTBTTEEEEESCSC-TTCGGGTTSSCEEEEC
T ss_pred ccceECCCCCCccCeEEEEEEEecccCCCCCEEEEECCcCcchhhCCEEEEEcCCC-CCCcCcccCceeeeeC
Confidence 9999998888889999999999998 89999999999999999999999999873 2469999999999974
No 29
>2xu3_A Cathepsin L1; hydrolase, drug design, thiol protease; HET: XU3 BTB; 0.90A {Homo sapiens} PDB: 2xu4_A* 2xu5_A* 2yj2_A* 2yj8_A* 2yj9_A* 2yjb_A* 2yjc_A* 3bc3_A* 3h89_A* 3h8b_A* 3h8c_A* 3of9_A* 3of8_A* 3hha_A* 2xu1_A* 3iv2_A* 3k24_A* 2nqd_B* 3kse_A* 2vhs_A ...
Probab=100.00 E-value=8.9e-62 Score=460.82 Aligned_cols=212 Identities=49% Similarity=0.985 Sum_probs=192.1
Q ss_pred CCCeeecCCCCCcccccCCCCCcchHHHHHHHHHHHHHHHHhCCccccChHHHhhhcCCC-CCCCCCCchHHHHHHHHHh
Q 012960 117 VPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSY-NSGCGGGLMDYAYQFVIKN 195 (452)
Q Consensus 117 lP~s~Dwr~~g~vtpVkdQg~cGsCWAfA~~~alE~~~~~~~~~~~~lS~q~lvdc~~~~-~~gC~GG~~~~a~~~~~~~ 195 (452)
||++||||++|+|+||||||.||||||||++++||+++++++++.++||+|+|+||...+ +.||+||++..|++|++++
T Consensus 1 lP~~~DwR~~~~v~pVkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~~~g~~gC~GG~~~~a~~y~~~~ 80 (220)
T 2xu3_A 1 APRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDN 80 (220)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCTTTTCCTTBCCCHHHHHHHHHHH
T ss_pred CCCcEeCCCCCCCCCCcccCcccHHHHHHhHHHHHHHHHHhcCCceecCHHHHHhhccCCCCCCCCCCCHHHHHHHHHHh
Confidence 799999999999999999999999999999999999999999999999999999998644 7899999999999999766
Q ss_pred CCcCCCCCCCCCCCCCCccccccccchhhhhhccccceEEeeeeEecCCChHHHHHHHHHc-CCeEEEEEcCchhhhccC
Q 012960 196 HGIDTEKDYPYRGQAGQCNKQKVLHFLTSFVLQLNRHIVTIDGYKDVPENNEKQLLQAVVA-QPVSVGICGSERAFQLYS 274 (452)
Q Consensus 196 ~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~lk~al~~-gPV~v~i~~~~~~f~~Y~ 274 (452)
.|+++|++|||.+.++.|.... ....++|.+|..++. ++++||++|++ |||+|+|++..++|++|+
T Consensus 81 ~Gi~~e~~yPY~~~~~~C~~~~------------~~~~~~i~~~~~v~~-~~~~ik~~l~~~GPV~v~~~~~~~~f~~Y~ 147 (220)
T 2xu3_A 81 GGLDSEESYPYEATEESCKYNP------------KYSVANDTGFVDIPK-QEKALMKAVATVGPISVAIDAGHESFLFYK 147 (220)
T ss_dssp TCEEBTTTSCCCSSCCCCCCCG------------GGEEECCSEEEECCS-CHHHHHHHHHHTCCEEEEECCCSHHHHTCC
T ss_pred CCcccccccCCcccCcCccCCC------------CCcceeeeeEEEeCC-CHHHHHHHHHhcCCEEEEEeecCccccccc
Confidence 7999999999999988897654 234577889999986 88999999986 999999999767899999
Q ss_pred CceEeCC-CCC-CCCceEEEEEEe----ecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccccccc
Q 012960 275 SGIFTGP-CST-SLDHAVLIVGYD----SENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 344 (452)
Q Consensus 275 sGiy~~~-~~~-~~~HaV~IVGyg----~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 344 (452)
+|||+.+ |+. .++|||+||||| +++|++|||||||||++|||+|||||+|+.+ |+|||+++++||++
T Consensus 148 ~Gvy~~~~c~~~~~~HaV~iVGygd~~~~~~g~~yWivkNSWG~~WG~~Gy~~i~~~~~---n~Cgi~~~~~~p~~ 220 (220)
T 2xu3_A 148 EGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRR---NHCGIASAASYPTV 220 (220)
T ss_dssp SSEECCTTCCSSCCCEEEEEEEEEECCCSSSCCEEEEEECSBCTTSTBTTEEEEECSSS---SGGGTTTSCEEEEC
T ss_pred ceEEcCCCCCCCCCCeEEEEEEcCCccccCCCCcEEEEEeCCCCCcccCcEEEEecCCC---CcCCccccceeeeC
Confidence 9999654 764 789999999999 6678999999999999999999999999863 48999999999973
No 30
>2oul_A Falcipain 2; cysteine protease, inhibitor, macromolecular interaction, HY hydrolase inhibitor complex; 2.20A {Plasmodium falciparum} SCOP: d.3.1.1 PDB: 2ghu_A 1yvb_A 3bpf_A* 3pnr_A
Probab=100.00 E-value=6.2e-62 Score=467.86 Aligned_cols=215 Identities=39% Similarity=0.767 Sum_probs=195.9
Q ss_pred CCCCCCeeecCCCCCcccccCCCCCcchHHHHHHHHHHHHHHHHhCCccccChHHHhhhcCCCCCCCCCCchHHHHHHHH
Q 012960 114 LRDVPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVI 193 (452)
Q Consensus 114 ~~~lP~s~Dwr~~g~vtpVkdQg~cGsCWAfA~~~alE~~~~~~~~~~~~lS~q~lvdc~~~~~~gC~GG~~~~a~~~~~ 193 (452)
..+||++||||++|+|+||||||.||||||||++++||++++++++..++||||+|+||.. .+.||+||++..|++|+.
T Consensus 15 ~~~lP~~~DwR~~~~vtpVkdQg~CGsCWAFaa~~alE~~~~i~~~~~~~lSeq~l~dC~~-~~~gC~GG~~~~a~~yi~ 93 (241)
T 2oul_A 15 ENFDHAAYDWRLHSGVTPVKDQKNCGSCWAFSSIGSVESQYAIRKNKLITLSEQELVDCSF-KNYGCNGGLINNAFEDMI 93 (241)
T ss_dssp CCCCSSCEEGGGTTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHCT-TSCTTBCBCHHHHHHHHH
T ss_pred cccCCCccccCcCCCCCCCccCccchHHHHHHHHHHHHHHHHHhcCCCcccCHHHHHhhcC-CCCCCCCCCHHHHHHHHH
Confidence 3579999999999999999999999999999999999999999999999999999999986 378999999999999998
Q ss_pred HhCCcCCCCCCCCCCCCCC-ccccccccchhhhhhccccceEEeeeeEecCCChHHHHHHHHHcCCeEEEEEcCchhhhc
Q 012960 194 KNHGIDTEKDYPYRGQAGQ-CNKQKVLHFLTSFVLQLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQL 272 (452)
Q Consensus 194 ~~~Gi~~e~~yPY~~~~~~-C~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~lk~al~~gPV~v~i~~~~~~f~~ 272 (452)
+++|+++|++|||.+..+. |.... ....++|.+|..++..++++||++| |||+|+|++. .+|+.
T Consensus 94 ~~~Gi~~e~~yPY~~~~~~~C~~~~------------~~~~~~i~~~~~v~~~~~~~ik~~l--GPV~v~i~~~-~~f~~ 158 (241)
T 2oul_A 94 ELGGICPDGDYPYVSDAPNLCNIDR------------CTEKYGIKNYLSVPDNKLKEALRFL--GPISISVAVS-DDFAF 158 (241)
T ss_dssp HTTSBCBTTSSCCCTTSCCCCCTTS------------SSCCBCCSEEEECCTTCHHHHHHHT--CCEEEEECBC-HHHHT
T ss_pred HhCCcCccccCCCcCCCCCcCCCCC------------CccceeeeeEEEeCCCCHHHHHHhh--CCEEEEEecC-cchhh
Confidence 7679999999999998888 87643 2345678899889877899999999 9999999996 78999
Q ss_pred cCCceEeCCCCCCCCceEEEEEEeecC----------CeeEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccccc
Q 012960 273 YSSGIFTGPCSTSLDHAVLIVGYDSEN----------GVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYP 342 (452)
Q Consensus 273 Y~sGiy~~~~~~~~~HaV~IVGyg~~~----------g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p 342 (452)
|++|||+..|+..++|||+|||||+++ |++|||||||||++|||+|||||+|+.++..|.|||+++++||
T Consensus 159 Y~~Giy~~~c~~~~~HaV~iVGyg~~~~~~~~~~~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~~~~~~ 238 (241)
T 2oul_A 159 YKEGIFDGECGDQLNHAVMLVGFGMKEIVNPLTKKGEKHYYYIIKNSWGQQWGERGFINIETDESGLMRKCGLGTDAFIP 238 (241)
T ss_dssp CCSSBCCSCBCSSCCEEEEEEEEEEEEEECTTTCSEEEEEEEEEECSBCTTSTBTTEEEEEECSSSCCCGGGTTSSEEEE
T ss_pred cCCcEEcCcCCCCCCEEEEEEEeccccccccccccCCCCCEEEEEeCCCCCcccCCEEEEEcCCCCCCCcCCccceEEEE
Confidence 999999877776689999999999875 8899999999999999999999999987656679999999999
Q ss_pred cc
Q 012960 343 TK 344 (452)
Q Consensus 343 ~~ 344 (452)
++
T Consensus 239 ~~ 240 (241)
T 2oul_A 239 LI 240 (241)
T ss_dssp EC
T ss_pred ee
Confidence 85
No 31
>3bwk_A Cysteine protease falcipain-3; malaria, hydrolase; HET: C1P; 2.42A {Plasmodium falciparum} PDB: 3bpm_A*
Probab=100.00 E-value=9e-62 Score=467.29 Aligned_cols=215 Identities=37% Similarity=0.750 Sum_probs=195.8
Q ss_pred CCCCCCeeecCCCCCcccccCCCCCcchHHHHHHHHHHHHHHHHhCCccccChHHHhhhcCCCCCCCCCCchHHHHHHHH
Q 012960 114 LRDVPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVI 193 (452)
Q Consensus 114 ~~~lP~s~Dwr~~g~vtpVkdQg~cGsCWAfA~~~alE~~~~~~~~~~~~lS~q~lvdc~~~~~~gC~GG~~~~a~~~~~ 193 (452)
..+||++||||++|+|+||||||.||||||||++++||++++++++..++||+|+|+||... +.||+||++..|++|+.
T Consensus 17 ~~~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~alE~~~~i~~~~~~~lSeq~lvdC~~~-~~gC~GG~~~~a~~y~~ 95 (243)
T 3bwk_A 17 AKLDRIAYDWRLHGGVTPVKDQALCGSCWAFSSVGSVESQYAIRKKALFLFSEQELVDCSVK-NNGCYGGYITNAFDDMI 95 (243)
T ss_dssp CCCCCSCEEGGGTTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHHHCSCCCBCHHHHHHHCTT-SCGGGCCCHHHHHHHHH
T ss_pred cccCCCceecCcCCCCCCCccCCCCchHHHHHHHHHHHHHHHHhcCCCcccCHHHHHHhcCC-CCCCCCCCHHHHHHHHH
Confidence 46799999999999999999999999999999999999999999999999999999999863 78999999999999998
Q ss_pred HhCCcCCCCCCCCCCCCCC-ccccccccchhhhhhccccceEEeeeeEecCCChHHHHHHHHHcCCeEEEEEcCchhhhc
Q 012960 194 KNHGIDTEKDYPYRGQAGQ-CNKQKVLHFLTSFVLQLNRHIVTIDGYKDVPENNEKQLLQAVVAQPVSVGICGSERAFQL 272 (452)
Q Consensus 194 ~~~Gi~~e~~yPY~~~~~~-C~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~lk~al~~gPV~v~i~~~~~~f~~ 272 (452)
+++|+++|++|||.+..+. |.... ....++|.+|..++..++++||++| |||+|+|++. .+|+.
T Consensus 96 ~~~Gi~~e~~yPY~~~~~~~C~~~~------------~~~~~~i~~~~~v~~~~~~~ik~~l--GPV~v~i~~~-~~f~~ 160 (243)
T 3bwk_A 96 DLGGLCSQDDYPYVSNLPETCNLKR------------CNERYTIKSYVSIPDDKFKEALRYL--GPISISIAAS-DDFAF 160 (243)
T ss_dssp HTTSBCBTTTSCCCTTSCCCCCGGG------------CSSCBCCCEEEECCTTCHHHHHHHT--CCEEEEECCC-HHHHT
T ss_pred HhCCcccccccCCcCCCCCcCCCCC------------CccceeeeeEEEeCCCCHHHHHHhh--CCEEEEEecC-hhHHh
Confidence 7679999999999998887 87643 2344678899999877899999999 9999999996 78999
Q ss_pred cCCceEeCCCCCCCCceEEEEEEeecC----------CeeEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccccc
Q 012960 273 YSSGIFTGPCSTSLDHAVLIVGYDSEN----------GVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYP 342 (452)
Q Consensus 273 Y~sGiy~~~~~~~~~HaV~IVGyg~~~----------g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p 342 (452)
|++|||+..|+..++|||+|||||+++ |++|||||||||++|||+|||||+|+.++..|.|||+++++||
T Consensus 161 Y~~Giy~~~c~~~~~HaV~iVGyg~~~~~~~~~~~~~g~~yWivkNSWG~~WGe~Gy~~i~~~~~~~~g~Cgi~~~~~~~ 240 (243)
T 3bwk_A 161 YRGGFYDGECGAAPNHAVILVGYGMKDIYNEDTGRMEKFYYYIIKNSWGSDWGEGGYINLETDENGYKKTCSIGTEAYVP 240 (243)
T ss_dssp CCSSSCCCCCCSSCCEEEEEEEEEEEEEECTTTCSEEEEEEEEEECSBCTTSTBTTEEEEEECSSSCCCSTTTTSSEEEE
T ss_pred cCCceecCCCCCcCCeEEEEEEecCccccccccccCCCCCEEEEEeCCCCCcCCCcEEEEEcCCCCCCCcCCccceEEEE
Confidence 999999877776689999999999875 8899999999999999999999999987655679999999999
Q ss_pred cc
Q 012960 343 TK 344 (452)
Q Consensus 343 ~~ 344 (452)
++
T Consensus 241 ~~ 242 (243)
T 3bwk_A 241 LL 242 (243)
T ss_dssp EC
T ss_pred ec
Confidence 75
No 32
>8pch_A Cathepsin H; hydrolase, protease, cysteine proteinase, aminopeptidase; HET: NAG BMA; 2.10A {Sus scrofa} SCOP: d.3.1.1 PDB: 1nb3_A* 1nb5_A*
Probab=100.00 E-value=1.9e-61 Score=458.60 Aligned_cols=212 Identities=45% Similarity=0.933 Sum_probs=193.0
Q ss_pred CCCeeecCCCC-CcccccCCCCCcchHHHHHHHHHHHHHHHHhCCccccChHHHhhhcCC-CCCCCCCCchHHHHHHHHH
Q 012960 117 VPASIDWRKKG-AVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRS-YNSGCGGGLMDYAYQFVIK 194 (452)
Q Consensus 117 lP~s~Dwr~~g-~vtpVkdQg~cGsCWAfA~~~alE~~~~~~~~~~~~lS~q~lvdc~~~-~~~gC~GG~~~~a~~~~~~ 194 (452)
||++||||++| +|+||||||.||||||||++++||++++++++..++||||+|+||+.. .+.||+||++..|++|+.+
T Consensus 1 lP~~~DwR~~~~~vtpVkdQg~cGsCWAfa~~~~le~~~~i~~~~~~~lS~q~l~dc~~~~~~~gC~GG~~~~a~~~~~~ 80 (220)
T 8pch_A 1 YPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRY 80 (220)
T ss_dssp CCSCEEHHHHSSCSCCCCBCTTSCCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHGGGGTCCGGGCCCHHHHHHHHHH
T ss_pred CCCCEecCcCCCcCCcccccCCCchHHHHHHHHHHHHHHHHHcCCCCCCCHHHHhhCcCccCCCCCCCCCHHHHHHHHHH
Confidence 79999999999 899999999999999999999999999999999999999999999863 3789999999999999988
Q ss_pred hCCcCCCCCCCCCCCCCCccccccccchhhhhhccccceEEeeeeEecCCChHHHHHHHHHc-CCeEEEEEcCchhhhcc
Q 012960 195 NHGIDTEKDYPYRGQAGQCNKQKVLHFLTSFVLQLNRHIVTIDGYKDVPENNEKQLLQAVVA-QPVSVGICGSERAFQLY 273 (452)
Q Consensus 195 ~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~lk~al~~-gPV~v~i~~~~~~f~~Y 273 (452)
++|+++|++|||.+..+.|.... .....++.+|..++..++++||++|++ |||+|+|++. .+|+.|
T Consensus 81 ~~Gi~~e~~yPY~~~~~~C~~~~------------~~~~~~i~~~~~v~~~~~~~ik~~l~~~gPV~~~~~~~-~~f~~Y 147 (220)
T 8pch_A 81 NKGIMGEDTYPYKGQDDHCKFQP------------DKAIAFVKDVANITMNDEEAMVEAVALYNPVSFAFEVT-NDFLMY 147 (220)
T ss_dssp HTCEEBTTTSCCCSSCCCCCCCG------------GGEEECEEEEEECCTTCHHHHHHHHHHTCCEEEEECCC-HHHHTC
T ss_pred cCCcCcccccCccCCCCCCCCCC------------CcceEEeCCEEEeCCCCHHHHHHHHHhcCCEEEEEEec-cchhhc
Confidence 77999999999999988998654 344567889999988889999999985 9999999997 599999
Q ss_pred CCceEeC-CCCC---CCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCCCcccccccccccccc
Q 012960 274 SSGIFTG-PCST---SLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTKT 345 (452)
Q Consensus 274 ~sGiy~~-~~~~---~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~~ 345 (452)
++|||+. .|.. .++|||+|||||+++|++|||||||||++|||+|||||+|+.| +|||+++++||++.
T Consensus 148 ~~Giy~~~~~~~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~n----~cgi~~~~~~~~p~ 219 (220)
T 8pch_A 148 RKGIYSSTSCHKTPDKVNHAVLAVGYGEENGIPYWIVKNSWGPQWGMNGYFLIERGKN----MCGLAACASYPIPL 219 (220)
T ss_dssp CSSEECCSSCCCSTTTCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSSC----GGGTTTSCEEEEEC
T ss_pred CCCcccCCcCCCCCCcCCcEEEEEEEEccCCeeEEEEECCCCcCcccCCEEEEEcCCC----ccccCCCceeEeec
Confidence 9999964 4543 5799999999999999999999999999999999999999864 89999999999854
No 33
>1m6d_A Cathepsin F, catsf; papain family cysteine protease, hydrolase; HET: MYP; 1.70A {Homo sapiens} SCOP: d.3.1.1
Probab=100.00 E-value=3.9e-61 Score=454.46 Aligned_cols=208 Identities=44% Similarity=0.842 Sum_probs=186.8
Q ss_pred CCCeeecCCCCCcccccCCCCCcchHHHHHHHHHHHHHHHHhCCccccChHHHhhhcCCCCCCCCCCchHHHHHHHHHhC
Q 012960 117 VPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKNH 196 (452)
Q Consensus 117 lP~s~Dwr~~g~vtpVkdQg~cGsCWAfA~~~alE~~~~~~~~~~~~lS~q~lvdc~~~~~~gC~GG~~~~a~~~~~~~~ 196 (452)
||++||||++|+|+||||||.||||||||++++||++++++++..++||||+|+||.. .+.||+||++..|++|+.+++
T Consensus 1 lP~~~DwR~~~~vt~VkdQg~cGsCWAfa~~~~le~~~~i~~g~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~~i~~~~ 79 (214)
T 1m6d_A 1 APPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGTLLSLSEQELLDCDK-MDKACMGGLPSNAYSAIKNLG 79 (214)
T ss_dssp CCSCEEGGGGTCCCCCCBCCSSBCHHHHHHHHHHHHHHHHHHSCCCCBCHHHHHHHCS-SSCTTBCCCHHHHHHHHHHHT
T ss_pred CCCcCcCCCCCCCCCCccCCCCchHHHHHHHHHHHHHHHHHcCCCcccCHHHHHHhcC-CCCCCCCCCHHHHHHHHHHhc
Confidence 7999999999999999999999999999999999999999999999999999999986 478999999999999998877
Q ss_pred CcCCCCCCCCCCCCCCccccccccchhhhhhccccceEEeeeeEecCCChHHHHHHHHHc-CCeEEEEEcCchhhhccCC
Q 012960 197 GIDTEKDYPYRGQAGQCNKQKVLHFLTSFVLQLNRHIVTIDGYKDVPENNEKQLLQAVVA-QPVSVGICGSERAFQLYSS 275 (452)
Q Consensus 197 Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~lk~al~~-gPV~v~i~~~~~~f~~Y~s 275 (452)
|+++|++|||.+..+.|.... ....+++.++..++. ++++||++|++ |||+|+|++. .|++|++
T Consensus 80 Gi~~e~~yPY~~~~~~C~~~~------------~~~~~~i~~~~~i~~-~~~~ik~~l~~~GPV~v~i~~~--~f~~Y~~ 144 (214)
T 1m6d_A 80 GLETEDDYSYQGHMQSCQFSA------------EKAKVYIQDSVELSQ-NEQKLAAWLAKRGPISVAINAF--GMQFYRH 144 (214)
T ss_dssp CBCBTTTSCCCSSCCCCCCCG------------GGCCBCCSEEEECCS-CHHHHHHHHHHHCCEEEEECTH--HHHHCCS
T ss_pred CcccccCcCcCCCCCcCCCCc------------ccceEEecCEEEeCh-HHHHHHHHHHhCCCEEEEEEec--hhhhcCC
Confidence 999999999999888897654 122346778888874 78899999875 9999999985 5999999
Q ss_pred ceEeC---CCCC-CCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccccccc
Q 012960 276 GIFTG---PCST-SLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 344 (452)
Q Consensus 276 Giy~~---~~~~-~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 344 (452)
|||+. .|+. .++|||+|||||+++|++|||||||||++|||+|||||+|+. |+|||+++++||++
T Consensus 145 Giy~~~~~~c~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~r~~----n~Cgi~~~~~~~~~ 213 (214)
T 1m6d_A 145 GISRPLRPLCSPWLIDHAVLLVGYGQRSDVPFWAIKNSWGTDWGEKGYYYLHRGS----GACGVNTMASSAVV 213 (214)
T ss_dssp SEECCCGGGSCTTCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEESSS----CGGGTTTTCEEEEC
T ss_pred ceecCCCCcCCCCcCCEEEEEEEEeecCCcEEEEEEeCCCCCcccCcEEEEEcCC----CccccCceeEEEEe
Confidence 99965 3654 579999999999999999999999999999999999999985 48999999999985
No 34
>3i06_A Cruzipain; autocatalytic cleavage, glycoprotein, protease, thiol protease, zymogen; HET: QL2; 1.10A {Trypanosoma cruzi} SCOP: d.3.1.1 PDB: 1ewm_A* 1ewo_A* 1ewl_A* 1f29_A* 1ewp_A* 1f2b_A* 1f2c_A* 1f2a_A* 1me4_A* 1u9q_X* 2aim_A* 2efm_A* 2oz2_A* 1me3_A* 3kku_A* 3lxs_A* 1aim_A* 3iut_A* 3hd3_A* 2p86_A* ...
Probab=100.00 E-value=5.1e-61 Score=454.02 Aligned_cols=208 Identities=40% Similarity=0.803 Sum_probs=185.6
Q ss_pred CCCeeecCCCCCcccccCCCCCcchHHHHHHHHHHHHHHHHhCCccccChHHHhhhcCCCCCCCCCCchHHHHHHHHHh-
Q 012960 117 VPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKN- 195 (452)
Q Consensus 117 lP~s~Dwr~~g~vtpVkdQg~cGsCWAfA~~~alE~~~~~~~~~~~~lS~q~lvdc~~~~~~gC~GG~~~~a~~~~~~~- 195 (452)
||++||||++|+||||||||.||||||||++++||++++++++..++||||+|+||+. .+.||+||++..|++|++++
T Consensus 1 lP~~~Dwr~~g~vtpVkdQg~cGsCWAfa~~~ale~~~~i~~~~~~~lS~q~l~dC~~-~~~gC~GG~~~~a~~y~~~~~ 79 (215)
T 3i06_A 1 APAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCDK-TDSGCSGGLMNNAFEWIVQEN 79 (215)
T ss_dssp CCSEEEGGGGTCCCCCCBCCSSCCHHHHHHHHHHHHHHHHTTSCCCCCCHHHHHHHCS-SSCGGGCCCHHHHHHHHHHHS
T ss_pred CCCcccCCcCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCccCHHHHhccCC-CCCCCCCCCHHHHHHHHHHhc
Confidence 7999999999999999999999999999999999999999999999999999999986 47899999999999999875
Q ss_pred -CCcCCCCCCCCCCCCC---CccccccccchhhhhhccccceEEeeeeEecCCChHHHHHHHHHc-CCeEEEEEcCchhh
Q 012960 196 -HGIDTEKDYPYRGQAG---QCNKQKVLHFLTSFVLQLNRHIVTIDGYKDVPENNEKQLLQAVVA-QPVSVGICGSERAF 270 (452)
Q Consensus 196 -~Gi~~e~~yPY~~~~~---~C~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~lk~al~~-gPV~v~i~~~~~~f 270 (452)
+|+++|++|||....+ .|.... ....++|.+|..++. ++++||++|++ |||+|+|++ ++|
T Consensus 80 ~gGi~~e~~yPY~~~~~~~~~C~~~~------------~~~~~~i~~~~~v~~-~~~~ik~~l~~~gPV~v~~~~--~~f 144 (215)
T 3i06_A 80 NGAVYTEDSYPYASGEGISPPCTTSG------------HTVGATITGHVELPQ-DEAQIAAWLAVNGPVAVAVDA--SSW 144 (215)
T ss_dssp TTEEEC-CCSCCCCTTSCCCCCCCSS------------CCEEEEEEEEEECCS-CHHHHHHHHHHHCCEEEEECC--TTG
T ss_pred cccccccCccCCcCCCCCCCccccCC------------cccceEecceEEeCC-hHHHHHHHHHHCCCEEEEEEc--hHH
Confidence 5799999999997554 576543 234578889999974 78999999975 999999998 489
Q ss_pred hccCCceEeCCCCCCCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccccccc
Q 012960 271 QLYSSGIFTGPCSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 344 (452)
Q Consensus 271 ~~Y~sGiy~~~~~~~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 344 (452)
++|++|||+......++|||+|||||+++|++|||||||||++|||+|||||+|+.| +|||++.++||++
T Consensus 145 ~~Y~~Giy~~~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~rg~n----~cgi~~~~~~~~~ 214 (215)
T 3i06_A 145 MTYTGGVMTSCVSEQLDHGVLLVGYNDSAAVPYWIIKNSWTTQWGEEGYIRIAKGSN----QCLVKEEASSAVV 214 (215)
T ss_dssp GGCCSSEECSCCCSCCCEEEEEEEEESSSSSCEEEEECSBCTTSTBTTEEEEESSSC----GGGTTSSEEEEEE
T ss_pred hcCCCCcccCCCCCccCcEEEEEEEeccCCcEEEEEECCCCCCcccCceEEEecCCC----eecCCCceeEEec
Confidence 999999997544556899999999999999999999999999999999999999864 8999999999975
No 35
>3f5v_A DER P 1 allergen; allergy, asthma, DUST mites, glycoprotein, hydrola protease, secreted, thiol protease; HET: P6G; 1.36A {Dermatophagoides pteronyssinus} PDB: 2as8_A 3rvw_A* 3rvx_A 3rvv_A* 3d6s_A*
Probab=100.00 E-value=1.2e-60 Score=453.59 Aligned_cols=211 Identities=31% Similarity=0.538 Sum_probs=191.2
Q ss_pred CCCCCCeeecCCCCCcccccCCCCCcchHHHHHHHHHHHHHHHHhCCccccChHHHhhhcCCCCCCCCCCchHHHHHHHH
Q 012960 114 LRDVPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVI 193 (452)
Q Consensus 114 ~~~lP~s~Dwr~~g~vtpVkdQg~cGsCWAfA~~~alE~~~~~~~~~~~~lS~q~lvdc~~~~~~gC~GG~~~~a~~~~~ 193 (452)
..+||++||||++|+|+||||||.||||||||++++||+++.++++..++||||+|+||.. +.||+||++..|++|+.
T Consensus 7 ~~~lP~~~DwR~~~~vtpVkdQg~cGsCWAfa~~~~lE~~~~~~~~~~~~lS~q~l~dc~~--~~gC~GG~~~~a~~~~~ 84 (222)
T 3f5v_A 7 NGNAPAEIDLRQMRTVTPIRMQGGCGSAWAFSGVAATESAYLAYRQQSLDLAEQELVDCAS--QHGCHGDTIPRGIEYIQ 84 (222)
T ss_dssp CCCCCSCEEHHHHTCSCCCCBCCSSBCHHHHHHHHHHHHHHHHHHCCCCCBCHHHHHHHTC--SSTTBCCCHHHHHHHHH
T ss_pred ccCCCCCCCCccCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHhCcC--CCCCCCCCHHHHHHHHH
Confidence 3589999999999999999999999999999999999999999999999999999999997 78999999999999998
Q ss_pred HhCCcCCCCCCCCCCCCCCccccccccchhhhhhccccceEEeeeeEecCCChHHHHHHHHHc--CCeEEEEEcC-chhh
Q 012960 194 KNHGIDTEKDYPYRGQAGQCNKQKVLHFLTSFVLQLNRHIVTIDGYKDVPENNEKQLLQAVVA--QPVSVGICGS-ERAF 270 (452)
Q Consensus 194 ~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~lk~al~~--gPV~v~i~~~-~~~f 270 (452)
++ |+++|++|||.+..+.|. .. ....+++.+|..++..++++||++|++ |||+|+|++. .++|
T Consensus 85 ~~-Gi~~e~~yPY~~~~~~C~-~~------------~~~~~~i~~~~~v~~~~~~~ik~~l~~~~gpV~v~~~~~~~~~f 150 (222)
T 3f5v_A 85 HN-GVVQESYYRYVAREQSCR-RP------------NAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAF 150 (222)
T ss_dssp HH-CEEBGGGSCCCSSCCCCC-CC------------SSCEECCSEEEECCSCCHHHHHHHHHHHCCCEEEEEEESCHHHH
T ss_pred Hc-CCCchhhCCCcccCCCcc-CC------------cCcceeeccEEEeCCCCHHHHHHHHHhcCCCEEEEEEeccchhh
Confidence 76 999999999999888898 22 345678899999987889999999986 8999999984 3689
Q ss_pred hccCCceEe-CCC-CCCCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCCCCCCccccccccccccc
Q 012960 271 QLYSSGIFT-GPC-STSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPTK 344 (452)
Q Consensus 271 ~~Y~sGiy~-~~~-~~~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~~ 344 (452)
++|++|||. ..+ ...++|||+|||||+++|++|||||||||++|||+|||||+|+. |+|||+++++||+.
T Consensus 151 ~~Y~~gi~~~~~~~~~~~~HaV~iVGyg~~~g~~ywivkNSWG~~WGe~Gy~~i~r~~----n~cgi~~~~~~p~~ 222 (222)
T 3f5v_A 151 RHYDGRTIIQRDNGYQPNYHAVNIVGYSNAQGVDYWIVRNSWDTNWGDNGYGYFAANI----DLMMIEEYPYVVIL 222 (222)
T ss_dssp HTCCSSSCBCCCCSSSCEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECSS----CGGGTTTSCEEEEC
T ss_pred hccCCCceecCCCCCCccCcEEEEEEEeccCCCEEEEEEcCCCCCcccCCEEEEEcCC----CeecCCCceeEEeC
Confidence 999999873 333 45689999999999999999999999999999999999999985 48999999999973
No 36
>3cbj_A Cathepsin B; cathepsin B, occluding loop, chagas disease, glyco hydrolase, lysosome, protease, thiol protease, zymogen, CYT vesicle; 1.80A {Homo sapiens} PDB: 3cbk_A 1gmy_A* 3ai8_B* 3k9m_A 1the_A* 1cpj_A* 1cte_A 2dcc_A* 2dc6_A* 1ito_A* 2dc8_A* 2dc9_A* 2dca_A* 2dcb_A* 2dc7_A* 2dcd_A* 1qdq_A* 1csb_B* 1huc_B 2ipp_B ...
Probab=100.00 E-value=7.5e-57 Score=438.71 Aligned_cols=224 Identities=29% Similarity=0.538 Sum_probs=180.6
Q ss_pred CCCCCeeecCCC----CCcccccCCCCCcchHHHHHHHHHHHHHHHHhC--CccccChHHHhhhcCC-CCCCCCCCchHH
Q 012960 115 RDVPASIDWRKK----GAVTEVKDQASCGACWAFSATGAIEGINKIVTG--SLVSLSEQELIDCDRS-YNSGCGGGLMDY 187 (452)
Q Consensus 115 ~~lP~s~Dwr~~----g~vtpVkdQg~cGsCWAfA~~~alE~~~~~~~~--~~~~lS~q~lvdc~~~-~~~gC~GG~~~~ 187 (452)
.+||++||||++ |.|+||||||.||||||||++++||++++|+++ ..++||||+|+||+.. .+.||+||++..
T Consensus 5 ~~lP~~~D~R~~w~~~~~vt~VkdQg~CGSCWAfa~~~ale~~~~i~~~~~~~~~LS~q~lvdC~~~~~~~gC~GG~~~~ 84 (266)
T 3cbj_A 5 LKLPASFDAREQWPQCPTIKEIRDQGSCGSAWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYPAE 84 (266)
T ss_dssp CCCCSCEEHHHHSTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTSCCCCBCHHHHHHHCGGGGBCTTBCBCHHH
T ss_pred CCCCccCcchhccCCCCcCCCCCCCCCcchHHHHHHHHHHHHHHHHHhCCCCccccCHHHHHhhccccCCCCCCCCCHHH
Confidence 479999999987 889999999999999999999999999999875 4789999999999853 368999999999
Q ss_pred HHHHHHHhCCcCC-------CCCCCCC---------CCCCCccccccccc----h-hhhhh-ccccceEEeeeeEecCCC
Q 012960 188 AYQFVIKNHGIDT-------EKDYPYR---------GQAGQCNKQKVLHF----L-TSFVL-QLNRHIVTIDGYKDVPEN 245 (452)
Q Consensus 188 a~~~~~~~~Gi~~-------e~~yPY~---------~~~~~C~~~~~~~~----~-~~~~~-~~~~~~~~i~~~~~i~~~ 245 (452)
|++|+.++ |+++ |++|||. +..+.|......+. + ..+.. ....+.+.+. +..++ .
T Consensus 85 a~~y~~~~-Gi~~~~~Y~~~e~~~PY~~~~~~~~~~~~~~~C~~~~~~p~c~~~c~~~~~~~~~~~~~~~~~-~~~v~-~ 161 (266)
T 3cbj_A 85 AWNFWTRK-GLVSGGLYESHVGCRPYSIPPCEAHVNGARPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYN-SYSVS-N 161 (266)
T ss_dssp HHHHHHHT-CBCBCCSTTCCCSSSCCCSCCCSCCCSCSSCCCCSCCCCCCCCCSCCTTCCSCTGGGCBCBSC-CEECC-S
T ss_pred HHHHHHHh-CcCcCccccccccccCcccccccccccCCCCCCccccCCCccccccCCCCcceeeeeeeeeee-eEEeC-C
Confidence 99999775 9999 9999998 34556643210000 0 00000 0011122233 33455 5
Q ss_pred hHHHHHHHHHc-CCeEEEEEcCchhhhccCCceEeCCCCCC-CCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEE
Q 012960 246 NEKQLLQAVVA-QPVSVGICGSERAFQLYSSGIFTGPCSTS-LDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQ 323 (452)
Q Consensus 246 ~~~~lk~al~~-gPV~v~i~~~~~~f~~Y~sGiy~~~~~~~-~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~ 323 (452)
++++||++|++ |||+|+|++. .+|+.|++|||+..+... ++|||+|||||+++|++|||||||||++|||+|||||+
T Consensus 162 ~~~~i~~~i~~~GPV~v~i~~~-~~f~~Y~~Gvy~~~~~~~~~~HaV~iVGyg~~~g~~yWivkNSWG~~WGe~Gy~~i~ 240 (266)
T 3cbj_A 162 SEKDIMAEIYKNGPVEGAFSVY-SDFLLYKSGVYQHVTGEMMGGHAIRILGWGVENGTPYWLVANSWNTDWGDNGFFKIL 240 (266)
T ss_dssp CHHHHHHHHHHHCCEEEEEEEE-GGGGGCCSSEECCCSSCEEEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEE
T ss_pred CHHHHHHHHHhcCCEEEEEEec-cchhhcCCeEEecCCCCccCCeEEEEEEecccCCceEEEEEcCCCCccCCCCEEEEE
Confidence 78999999875 9999999996 689999999998766653 59999999999999999999999999999999999999
Q ss_pred ecCCCCCCccccccccccccccC
Q 012960 324 RNTGNSLGICGINMLASYPTKTG 346 (452)
Q Consensus 324 r~~~~~~~~CgI~~~~~~p~~~~ 346 (452)
|+. |.|||++.++++++..
T Consensus 241 rg~----n~cgI~~~~~~~~p~~ 259 (266)
T 3cbj_A 241 RGQ----DHCGIESEVVAGIPRT 259 (266)
T ss_dssp CSS----CGGGTTTSCEECCBCC
T ss_pred cCC----CcccccCceEEEEeec
Confidence 986 4899999999887643
No 37
>3qsd_A Cathepsin B-like peptidase (C01 family); cysteine peptidase, digestive tract, hydrolase-hydrolase INH complex; HET: 074; 1.30A {Schistosoma mansoni} SCOP: d.3.1.0 PDB: 3s3q_A* 3s3r_A*
Probab=100.00 E-value=1.5e-56 Score=433.74 Aligned_cols=220 Identities=32% Similarity=0.628 Sum_probs=177.2
Q ss_pred CCCCeeecCCC----CCcccccCCCCCcchHHHHHHHHHHHHHHHHhC--CccccChHHHhhhcCCCCCCCCCCchHHHH
Q 012960 116 DVPASIDWRKK----GAVTEVKDQASCGACWAFSATGAIEGINKIVTG--SLVSLSEQELIDCDRSYNSGCGGGLMDYAY 189 (452)
Q Consensus 116 ~lP~s~Dwr~~----g~vtpVkdQg~cGsCWAfA~~~alE~~~~~~~~--~~~~lS~q~lvdc~~~~~~gC~GG~~~~a~ 189 (452)
+||++||||++ ++|+||||||.||||||||++++||++++|+++ ..++||||+|+||+...+.||+||++..|+
T Consensus 2 ~lP~s~D~R~~~~~~~~vtpVkdQg~CGSCWAFaa~~ale~~~~i~~~~~~~~~LSeQ~lvdC~~~~~~GC~GG~~~~a~ 81 (254)
T 3qsd_A 2 EIPSSFDSRKKWPRCKSIATIRDQSRCGSCWAFGAVEAMSDRSCIQSGGKQNVELSAVDLLSCCESCGLGCEGGILGPAW 81 (254)
T ss_dssp CCCSCEEHHHHCTTCGGGGCCCBCCSSBCHHHHHHHHHHHHHHHHHTTTCCCCCBCHHHHHHHCTTSBCTTBCBCHHHHH
T ss_pred CCCCcCccccccCCCCccCCCCCcccCccHHHHHHHHHHHHHHHHHhCCCccccCCHHHHHhhhcCCCCCCCCCCHHHHH
Confidence 68999999998 689999999999999999999999999999976 689999999999987567899999999999
Q ss_pred HHHHHhCCcCCCCCC-------CCC---------CCCCCccccc-----cccch-hhhhh-ccccceEEeeeeEecCCCh
Q 012960 190 QFVIKNHGIDTEKDY-------PYR---------GQAGQCNKQK-----VLHFL-TSFVL-QLNRHIVTIDGYKDVPENN 246 (452)
Q Consensus 190 ~~~~~~~Gi~~e~~y-------PY~---------~~~~~C~~~~-----~~~~~-~~~~~-~~~~~~~~i~~~~~i~~~~ 246 (452)
+|++++ ||++|++| ||. +..+.|.... +...+ ..+.. ......+....| .++ .+
T Consensus 82 ~yi~~~-Gi~~e~~y~~~~~c~PY~~~~c~~~~~~~~~~C~~~~~~~~~c~~~c~~~~~~~~~~~~~~~~~~~-~~~-~~ 158 (254)
T 3qsd_A 82 DYWVKE-GIVTGSSKENHAGCEPYPFPKCEHHTKGKYPPCGSKIYKTPRCKQTCQKKYKTPYTQDKHRGKSSY-NVK-ND 158 (254)
T ss_dssp HHHHHT-CBCBCCCTTTCCSSSCCSSCCCBCSSCSSSCBCCSCCCCCCCCCCCCCTTCCSCGGGGCBCCSEEE-ECC-SC
T ss_pred HHHHHc-CCCcccccccCcCcCCcccccccccccCcCCCCcccccCCccccccccCCccceeeeeeeeeeeeE-ecC-Cc
Confidence 999876 99999988 997 4445564221 00000 00000 011111112222 444 47
Q ss_pred HHHHHHHHHc-CCeEEEEEcCchhhhccCCceEeCCCCC-CCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEe
Q 012960 247 EKQLLQAVVA-QPVSVGICGSERAFQLYSSGIFTGPCST-SLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQR 324 (452)
Q Consensus 247 ~~~lk~al~~-gPV~v~i~~~~~~f~~Y~sGiy~~~~~~-~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r 324 (452)
+++||++|++ |||+|+|++. .+|++|++|||..++.. .++|||+|||||+++|++|||||||||++|||+|||||+|
T Consensus 159 ~~~i~~~l~~~gPv~~~~~~~-~~f~~y~~Gi~~~~~~~~~~~Hav~iVGyg~~~g~~ywivkNSWG~~WG~~Gy~~i~r 237 (254)
T 3qsd_A 159 EKAIQKEIMKYGPVEAGFTVY-EDFLNYKSGIYKHITGETLGGHAIRIIGWGVENKAPYWLIANSWNEDWGENGYFRIVR 237 (254)
T ss_dssp HHHHHHHHHHHCCEEEEEEEE-GGGGGCCSSEECCCSSCEEEEEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEEC
T ss_pred HHHHHHHHHHcCCEEEEEEec-cccccccCCeeccCCCCCCCCeEEEEEEEeecCCeeEEEEEeCCCCCcccCCeEEEEc
Confidence 8999999875 9999999986 78999999999776554 4599999999999999999999999999999999999999
Q ss_pred cCCCCCCcccccccccccc
Q 012960 325 NTGNSLGICGINMLASYPT 343 (452)
Q Consensus 325 ~~~~~~~~CgI~~~~~~p~ 343 (452)
+.| +|||++.++..+
T Consensus 238 g~n----~CgI~~~~~~~~ 252 (254)
T 3qsd_A 238 GRD----ECSIESEVTAGR 252 (254)
T ss_dssp SSC----GGGTTSSEEEEE
T ss_pred CCC----eecCCCceEeec
Confidence 864 899999887654
No 38
>1deu_A Procathepsin X; cysteine protease, proregion, prosegment, HY; 1.70A {Homo sapiens} SCOP: d.3.1.1 PDB: 1ef7_A
Probab=100.00 E-value=8.9e-56 Score=433.06 Aligned_cols=225 Identities=25% Similarity=0.525 Sum_probs=184.6
Q ss_pred CCCCCCeeecCCC---CCcccccCCC---CCcchHHHHHHHHHHHHHHHHhC-C--ccccChHHHhhhcCCCCCCCCCCc
Q 012960 114 LRDVPASIDWRKK---GAVTEVKDQA---SCGACWAFSATGAIEGINKIVTG-S--LVSLSEQELIDCDRSYNSGCGGGL 184 (452)
Q Consensus 114 ~~~lP~s~Dwr~~---g~vtpVkdQg---~cGsCWAfA~~~alE~~~~~~~~-~--~~~lS~q~lvdc~~~~~~gC~GG~ 184 (452)
..+||++||||++ ++|+|||||| .||||||||++++||++++|+++ . .++||+|+|+||+. ..||+||+
T Consensus 33 ~~~lP~~~DwR~~~~~~~vtpVkdQg~~~~CGSCWAfa~~~alE~~~~i~~~g~~~~~~LS~Q~lvdC~~--~~gC~GG~ 110 (277)
T 1deu_A 33 PADLPKSWDWRNVDGVNYASITRNQHIPQYCGSCWAHASTSAMADRINIKRKGAWPSTLLSVQNVIDCGN--AGSCEGGN 110 (277)
T ss_dssp GGGSCSCEETTSBTTBCCCCCCCBTTCSSCCBCHHHHHHHHHHHHHHHHHTTTCSSCCCBCHHHHHHHSS--SEETBEEC
T ss_pred cccCCCceecccCCCCCcCCccccCCCCCCCcchHHHHHHHHHHHHHHHHhCCCCCCcccCHHHHHhCcC--CCCCCCCC
Confidence 4579999999998 6899999999 99999999999999999999875 3 47999999999986 48999999
Q ss_pred hHHHHHHHHHhCCcCCCCCCCCCCCCCCccccccccch-h--hhhhccccceEEeeeeEecCCChHHHHHHHHH-cCCeE
Q 012960 185 MDYAYQFVIKNHGIDTEKDYPYRGQAGQCNKQKVLHFL-T--SFVLQLNRHIVTIDGYKDVPENNEKQLLQAVV-AQPVS 260 (452)
Q Consensus 185 ~~~a~~~~~~~~Gi~~e~~yPY~~~~~~C~~~~~~~~~-~--~~~~~~~~~~~~i~~~~~i~~~~~~~lk~al~-~gPV~ 260 (452)
+..|++|+.++ ||++|++|||.+.++.|........+ + ..........+++..|..++ ++++||++|+ +|||+
T Consensus 111 ~~~a~~yi~~~-Gi~~e~~yPY~~~~~~C~~~~~~~~~~~~~~c~~~~~~~~~~i~~y~~v~--~~~~i~~~i~~~GPV~ 187 (277)
T 1deu_A 111 DLSVWDYAHQH-GIPDETCNNYQAKDQECDKFNQCGTCNEFKECHAIRNYTLWRVGDYGSLS--GREKMMAEIYANGPIS 187 (277)
T ss_dssp HHHHHHHHHHT-CBCBGGGSCCCSSCCCCCHHHHSEEEEETTEEEECSSCCCBCEEEEEEEC--SHHHHHHHHHHHCCEE
T ss_pred HHHHHHHHHHc-CCCcCccCCCcCCCCCccccccccccccCcccccccCcceEEeceeEecC--CHHHHHHHHHHcCCEE
Confidence 99999999765 99999999999988888731100000 0 00000112345677888776 4778898886 49999
Q ss_pred EEEEcCchhhhccCCceEeCC-CCCCCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecCC----CCCCcccc
Q 012960 261 VGICGSERAFQLYSSGIFTGP-CSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNTG----NSLGICGI 335 (452)
Q Consensus 261 v~i~~~~~~f~~Y~sGiy~~~-~~~~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~~----~~~~~CgI 335 (452)
|+|++. .+|+.|++|||+.+ +...++|||+|||||+++|++|||||||||++|||+|||||+|+.| .....|||
T Consensus 188 v~i~~~-~~f~~Y~~GIy~~~~~~~~~~HaV~iVGyg~~~g~~YWivkNSWG~~WGe~GY~~i~rg~n~~g~g~~~~cgI 266 (277)
T 1deu_A 188 CGIMAT-ERLANYTGGIYAEYQDTTYINHVVSVAGWGISDGTEYWIVRNSWGEPWGERGWLRIVTSTYKDGKGARYNLAI 266 (277)
T ss_dssp EEECCC-HHHHTCCSSEECBCCSCCCCCEEEEEEEEEEETTEEEEEEECSBCTTSTBTTEEEEECTTHHHHTGGGTBTTT
T ss_pred EEEecc-cccccCcCcEECCCCCCCcCCeEEEEEEecccCCccEEEEEeCCCCccCCCcEEEEEcCCCccccccccccee
Confidence 999987 68999999999654 4456899999999999999999999999999999999999999874 00127999
Q ss_pred ccccccccc
Q 012960 336 NMLASYPTK 344 (452)
Q Consensus 336 ~~~~~~p~~ 344 (452)
++.++|+++
T Consensus 267 e~~~~~~~p 275 (277)
T 1deu_A 267 EEHCTFGDP 275 (277)
T ss_dssp TSCEEEEEE
T ss_pred ccccEeecc
Confidence 999999875
No 39
>2wbf_X Serine-repeat antigen protein; SERA, malaria, vacuole, protease, cathepsin, hydrolase, glycoprotein, thiol protease; HET: DMS; 1.60A {Plasmodium falciparum} PDB: 3ch3_X 3ch2_X
Probab=100.00 E-value=3.6e-51 Score=398.57 Aligned_cols=221 Identities=24% Similarity=0.429 Sum_probs=163.6
Q ss_pred eeecCCC-CCcc--cccCCCCCcchHHHHHHHHHHHHHHHHhCCccccChHHHhhhcCCC-CCCCCCCchHHH-HHHHHH
Q 012960 120 SIDWRKK-GAVT--EVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRSY-NSGCGGGLMDYA-YQFVIK 194 (452)
Q Consensus 120 s~Dwr~~-g~vt--pVkdQg~cGsCWAfA~~~alE~~~~~~~~~~~~lS~q~lvdc~~~~-~~gC~GG~~~~a-~~~~~~ 194 (452)
-.|||++ |+++ ||||||.||||||||++++||++++++++.+++||||+|+||+... +.||+||....+ +.|+.+
T Consensus 10 ~~dWR~~~~~~~it~VkdQg~CGSCWAFaa~~alE~~~~i~~~~~~~LS~Q~lvdC~~~~~~~GC~GG~~~~~~~~~i~~ 89 (265)
T 2wbf_X 10 CNRLKDENNCISNLQVEDQGNCDTSWIFASKYHLETIRCMKGYEPTKISALYVANCYKGEHKDRCDEGSSPMEFLQIIED 89 (265)
T ss_dssp BCGGGCTTSTGGGSCCCBCTTSSCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHCCSSSCCCTTTCCCCHHHHHHHHHH
T ss_pred HHhhccCCCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHhhcccCCCCCCCCCCHHHHHHHHHH
Confidence 4799999 6877 9999999999999999999999999999899999999999998643 789999975554 566766
Q ss_pred hCCcCCCCCCCCCCC--CCCccccccc--cchhhhh---hccccceEEeeeeEecCCC----h----HHHHHHHHHc-CC
Q 012960 195 NHGIDTEKDYPYRGQ--AGQCNKQKVL--HFLTSFV---LQLNRHIVTIDGYKDVPEN----N----EKQLLQAVVA-QP 258 (452)
Q Consensus 195 ~~Gi~~e~~yPY~~~--~~~C~~~~~~--~~~~~~~---~~~~~~~~~i~~~~~i~~~----~----~~~lk~al~~-gP 258 (452)
++||++|++|||... .+.|...... ....... .......+++.+|..++.. + +++||++|++ ||
T Consensus 90 ~Ggi~~e~~yPY~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~ik~~i~~~GP 169 (265)
T 2wbf_X 90 YGFLPAESNYPYNYVKVGEQCPKVEDHWMNLWDNGKILHNKNEPNSLDGKGYTAYESERFHDNMDAFVKIIKTEVMNKGS 169 (265)
T ss_dssp HCCCCBTTTSCCCGGGTTSCCCCCCTTCCCTTTTCEECCCCCSSSTTCCSSEEEEEGGGGTTCHHHHHHHHHHHHHHHSC
T ss_pred cCCCCCccccCCcCCCCCCCCCCccccccccccccccccccCCCceeecCCceEeeccccccchhhHHHHHHHHHHhcCC
Confidence 756999999999863 4678654310 0000000 0000112345666655431 2 4789999875 99
Q ss_pred eEEEEEcCchhhhccC-CceE-eCCCCC-CCCceEEEEEEeec---CC--eeEEEEEcCCCCCCCCCcEEEEEecCCCCC
Q 012960 259 VSVGICGSERAFQLYS-SGIF-TGPCST-SLDHAVLIVGYDSE---NG--VDYWIIKNSWGRSWGMNGYMHMQRNTGNSL 330 (452)
Q Consensus 259 V~v~i~~~~~~f~~Y~-sGiy-~~~~~~-~~~HaV~IVGyg~~---~g--~~yWivkNSWG~~WGe~GY~~i~r~~~~~~ 330 (452)
|+|+|++. +|+.|+ +|++ ...|+. .++|||+|||||++ +| ++|||||||||++|||+|||||+|+.+
T Consensus 170 V~v~i~~~--~f~~y~~~g~~~~~~c~~~~~~HaV~iVGyG~~~~~~g~~~~YWivkNSWG~~WGe~GY~ri~~~g~--- 244 (265)
T 2wbf_X 170 VIAYIKAE--NVMGYEFSGKKVKNLCGDDTADHAVNIVGYGNYVNSEGEKKSYWIVRNSWGPYWGDEGYFKVDMYGP--- 244 (265)
T ss_dssp EEEEECGG--GGCSGGGGSSSEECCCCCSCCCEEEEEEEEEEEECTTSCEEEEEEEECSBCTTSTBTTEEEEESSCC---
T ss_pred EEEEEEcc--cccccccCCcEEcCCCCCCcCCEEEEEEEEeCCcccCCCcCCEEEEEcCCCCccCCCCEEEEEecCC---
Confidence 99999974 577774 4432 345664 68999999999985 66 689999999999999999999998532
Q ss_pred Ccccccc---cccccccc
Q 012960 331 GICGINM---LASYPTKT 345 (452)
Q Consensus 331 ~~CgI~~---~~~~p~~~ 345 (452)
|+|||+. .++||+..
T Consensus 245 n~Cgi~~~~~~~~~~~~~ 262 (265)
T 2wbf_X 245 THCHFNFIHSVVIFNVDL 262 (265)
T ss_dssp TTCSSCSCCEEEEECEEC
T ss_pred CccCcceeEEEEeccccC
Confidence 4899554 55555443
No 40
>3ois_A Cysteine protease; alpha and beta, hydrolase; HET: UDP; 1.65A {Xylella fastidiosa}
Probab=100.00 E-value=2.3e-49 Score=390.58 Aligned_cols=244 Identities=20% Similarity=0.232 Sum_probs=177.5
Q ss_pred ceEEecccCCccchHHhhhhhcCcCCCcccccccCCccccCCC-CCCCCCCeeecCCCCCcccccCCCCCcchHHHHHHH
Q 012960 70 SFTLSLNAFADLTHQEFKASFLGFSAASIDHDRRRNASVQSPG-NLRDVPASIDWRKKGAVTEVKDQASCGACWAFSATG 148 (452)
Q Consensus 70 s~~lg~N~fsDlt~eEf~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~lP~s~Dwr~~g~vtpVkdQg~cGsCWAfA~~~ 148 (452)
...-..|++.++..|.|+.. +|..++.+.... ..+..+. ...+||++||||+++ ||||||.||||||||+++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~-lG~~p~~~d~rd---~~~~~~~~~~~~lP~s~DwR~~~---pVkdQG~CGSCWAFAa~~ 85 (291)
T 3ois_A 13 GLVPRGSHMQTVLKRRKKSG-YGYIPDIADIRD---FSYTPEKSVIAALPPKVDLTPPF---QVYDQGRIGSCTANALAA 85 (291)
T ss_dssp ----------CCCCCCCCTT-CCEECCCCCTTC---CBCCCCHHHHHTCCSEEECCCSS---CCCBCTTSSCHHHHHHHH
T ss_pred CcccchhhHhHhhhcccccc-CCCCCCCCcccc---cccCCCccccccCCcceecccCC---CcccCCCCccHHHHHHHH
Confidence 34456789999999998776 677665543211 1121111 124799999999984 999999999999999999
Q ss_pred HHHHHHHHHhCCccccChHHHh--hhcCC--C-CCCCCCCchHHHHHHHHHhCCcCCCCCCCCCCCC---CCccccccc-
Q 012960 149 AIEGINKIVTGSLVSLSEQELI--DCDRS--Y-NSGCGGGLMDYAYQFVIKNHGIDTEKDYPYRGQA---GQCNKQKVL- 219 (452)
Q Consensus 149 alE~~~~~~~~~~~~lS~q~lv--dc~~~--~-~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~---~~C~~~~~~- 219 (452)
+||+++. +++..+.||+|+|+ +|... . ..+|+||++..|++|+.++ ||++|++|||.+.+ +.|......
T Consensus 86 alE~~~~-~~g~~~~lS~q~l~~~~c~~~~~~~~~~c~GG~~~~A~~yi~~~-Gi~~e~~yPY~~~~~~~~~C~~~~~~~ 163 (291)
T 3ois_A 86 AIQFERI-HDKQSPEFIPSRLFIYYNERKIEGHVNYDSGAMIRDGIKVLHKL-GVCPEKEWPYGDTPADPRTEEFPPGAP 163 (291)
T ss_dssp HHHHHHH-HTTCSSCCCBCHHHHHHHHHHHSSCTTSCCCEEHHHHHHHHHHT-CCCBGGGSCCCCCCCCTTTCSCCTTCG
T ss_pred HHHHHHH-HhCCCCCcCcCHHHHHhhhhhhhcCCCCCCCcCHHHHHHHHHHh-CCCCHhhCCCCCCcccccccccccccc
Confidence 9999875 46778899999998 67631 2 3468899999999999776 99999999999874 456542100
Q ss_pred -cchhhhhhccccceEEeeeeEecCCChHHHHHHHHHc-CCeEEEEEcCchhhhccCC--ceEeCC-CCC--CCCceEEE
Q 012960 220 -HFLTSFVLQLNRHIVTIDGYKDVPENNEKQLLQAVVA-QPVSVGICGSERAFQLYSS--GIFTGP-CST--SLDHAVLI 292 (452)
Q Consensus 220 -~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~lk~al~~-gPV~v~i~~~~~~f~~Y~s--Giy~~~-~~~--~~~HaV~I 292 (452)
...+..........++|.+|..++. ++++||++|++ |||+|+|+++ ++|+.|++ |||..+ |.. .++|||+|
T Consensus 164 ~~~~p~~~C~~~~~~~~i~~y~~v~~-~e~~i~~al~~~gPV~v~~~~~-~~f~~y~~~~Gi~~~~~~~~~~~~~Hav~i 241 (291)
T 3ois_A 164 ASKKPSDQCYKDAQNYKITEYSRVAQ-DIDHLKACLAVGSPFVFGFSVY-NSWVGNNSLPVRIPLPTKNDTLEGGHAVLC 241 (291)
T ss_dssp GGSCCCHHHHHHHGGGCCCEEEECCS-CHHHHHHHHHTTCCEEEEEEEE-HHHHGGGCCCSBCCCCCTTSCEEEEEEEEE
T ss_pred ccCCCCHHHHhhcccceeccEEEcCc-CHHHHHHHHHcCCCEEEEEEec-cchhhcCCCCeEEeCCCCCCCCcCCeEEEE
Confidence 0000000001123457889999975 78999999987 7999999987 68999998 999654 433 25999999
Q ss_pred EEEeecCCeeEEEEEcCCCCCCCCCcEEEEEecC
Q 012960 293 VGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRNT 326 (452)
Q Consensus 293 VGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~~ 326 (452)
||||+ +++|||||||||++|||+|||||+|+.
T Consensus 242 VGy~~--~~~ywivkNSWG~~WG~~Gy~~i~~~~ 273 (291)
T 3ois_A 242 VGYDD--EIRHFRIRNSWGNNVGEDGYFWMPYEY 273 (291)
T ss_dssp EEEET--TTTEEEEECSBCTTSTBTTEEEEEHHH
T ss_pred EEEeC--CCCEEEEEeCCCCCCCCCcEEEEEHHH
Confidence 99984 578999999999999999999999974
No 41
>2cb5_A Protein (bleomycin hydrolase); aminopeptidase, cysteine protease, SELF- compartmentalizing, cylinase; 1.85A {Homo sapiens} SCOP: d.3.1.1 PDB: 1cb5_A
Probab=100.00 E-value=1.7e-38 Score=325.69 Aligned_cols=207 Identities=19% Similarity=0.286 Sum_probs=153.1
Q ss_pred CCCCeeecCCCCCcccccCCCCCcchHHHHHHHHHHHHHHHH-hCCccccCh----------------HHHhhhcCC---
Q 012960 116 DVPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIV-TGSLVSLSE----------------QELIDCDRS--- 175 (452)
Q Consensus 116 ~lP~s~Dwr~~g~vtpVkdQg~cGsCWAfA~~~alE~~~~~~-~~~~~~lS~----------------q~lvdc~~~--- 175 (452)
..|..|+++....+|||||||.||+|||||+++++|+.+.++ +++.+.||+ |+|+||+..
T Consensus 47 ~~~~~F~~~~~~~~tpVknQg~cGsCWaFs~~~~le~~~~~k~~~~~~~lSe~yl~fwDKlEkan~flq~lidc~~~~~~ 126 (453)
T 2cb5_A 47 RAQHVFQHAVPQEGKPITNQKSSGRSWIFSCLNVMRLPFMKKLNIEEFEFSQSYLFFWDKVERCYFFLSAFVDTAQRKEP 126 (453)
T ss_dssp HCCCCCSEECSCCCSSCCBCCBSSCHHHHHHHHHHHHHHHHHTTCSCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCCceeeeeccCCCCcccCCCccchHhhhhHHHHHHHHHHHhcCCeEeeChHHHHHHHHHHHhhHHHHHHHHHHhccCC
Confidence 346678888888899999999999999999999999999998 578999999 999999753
Q ss_pred ----------CCCCCCCCchHHHHHHHHHhCCcCCCCCCCCCCCC---------------------------C------C
Q 012960 176 ----------YNSGCGGGLMDYAYQFVIKNHGIDTEKDYPYRGQA---------------------------G------Q 212 (452)
Q Consensus 176 ----------~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY~~~~---------------------------~------~ 212 (452)
.+.||+||.+..++.|+.+ +||++++.|||+... + .
T Consensus 127 ~d~R~v~~l~~~~gcdGG~~~~a~~~i~k-yGl~p~~~yP~~~~s~ns~~mn~~L~~kLr~~a~~LR~~~~~g~~~~~l~ 205 (453)
T 2cb5_A 127 EDGRLVQFLLMNPANDGGQWDMLVNIVEK-YGVIPKKCFPESYTTEATRRMNDILNHKMREFCIRLRNLVHSGATKGEIS 205 (453)
T ss_dssp TTSHHHHHHHHCTTCSCBCHHHHHHHHHH-HCCCBGGGSCCCTGGGBCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred cchhhHHHhcCCCCCCCCChHHHHHHHHH-cCccchhhccccccccchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHH
Confidence 2689999999999999965 699999999998741 1 0
Q ss_pred ----------------c----------ccc-c--c----ccchh-----hhhhc--cccceE----------------Ee
Q 012960 213 ----------------C----------NKQ-K--V----LHFLT-----SFVLQ--LNRHIV----------------TI 236 (452)
Q Consensus 213 ----------------C----------~~~-~--~----~~~~~-----~~~~~--~~~~~~----------------~i 236 (452)
| ... + . ..+.+ .+... .-...+ .|
T Consensus 206 ~~k~~~l~~iy~il~~clG~pP~~F~~~~~dkd~~~~~~~~~TP~~F~~~~~~~~~~~~~yv~l~n~p~~~~py~~~y~v 285 (453)
T 2cb5_A 206 ATQDVMMEEIFRVVCICLGNPPETFTWEYRDKDKNYEKIGPITPLEFYREHVKPLFNMEDKICLVNDPRPQHKHNKLYTV 285 (453)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCSSEEEEEECTTSCEEEEEEECHHHHHHHHTTTTSCGGGEEEEECCCCTTSCSSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCCceeeEEEEccCCcccccCCCCHHHHHHHhcCCcCCCCCeEEEecCCCCcCcccceeEE
Confidence 2 000 0 0 00000 11000 001111 11
Q ss_pred e-----------eeEecCCChH-HHHHHHHHc-CCeEEEEEcCchhhhccCCceEeCCC---------------------
Q 012960 237 D-----------GYKDVPENNE-KQLLQAVVA-QPVSVGICGSERAFQLYSSGIFTGPC--------------------- 282 (452)
Q Consensus 237 ~-----------~~~~i~~~~~-~~lk~al~~-gPV~v~i~~~~~~f~~Y~sGiy~~~~--------------------- 282 (452)
. .|..++..+. +.++.+|+. |||++++++.. +.++++|||+..+
T Consensus 286 ~~~~Nv~~g~~~~y~Nvp~~~l~~~~~~al~~g~PV~~~~Dv~~--~~~~k~GI~~~~~~~~~~~fg~~~~~m~KaeRl~ 363 (453)
T 2cb5_A 286 EYLSNMVGGRKTLYNNQPIDFLKKMVAASIKDGEAVWFGCDVGK--HFNSKLGLSDMNLYDHELVFGVSLKNMNKAERLT 363 (453)
T ss_dssp TTCCSSTTCCCCCEEECCHHHHHHHHHHHHHTTCCEEEEECTTT--TEETTTTEECTTSBCHHHHHSCCSCSSCHHHHHH
T ss_pred eecCcccccccccccccCHHHHHHHHHHHHHcCCCEEEEEEeCh--hhccCCcEEcCccccchhhcCccccccCHHHHhh
Confidence 1 1334443332 455567777 79999999974 4456999997653
Q ss_pred --CCCCCceEEEEEEe--ec-CCe-eEEEEEcCCCCCCCCCcEEEEEec
Q 012960 283 --STSLDHAVLIVGYD--SE-NGV-DYWIIKNSWGRSWGMNGYMHMQRN 325 (452)
Q Consensus 283 --~~~~~HaV~IVGyg--~~-~g~-~yWivkNSWG~~WGe~GY~~i~r~ 325 (452)
.+..+|||+||||| .+ +|+ +|||||||||++||++|||+|+|+
T Consensus 364 ~~~s~~~HAmlivGyg~~~d~~G~~~yWiVkNSWG~~wG~~GY~~ms~~ 412 (453)
T 2cb5_A 364 FGESLMTHAMTFTAVSEKDDQDGAFTKWRVENSWGEDHGHKGYLCMTDE 412 (453)
T ss_dssp TTSCCCCEEEEEEEEEECTTSCSCEEEEEEECSBCTTSTBTTEEEEEHH
T ss_pred ccCCCCCeEEEEEEeccccccCCCccEEEEEcCcCCCcCcCceEEechh
Confidence 23579999999999 65 787 999999999999999999999986
No 42
>2e01_A Cysteine proteinase 1; bleomycin hydrolase, thiol protease, C1 protease, hydrolase; 1.73A {Saccharomyces cerevisiae} PDB: 2e02_A 2e03_A 2dzy_A 1a6r_A 2e00_A 2dzz_A 3gcb_A 1gcb_A
Probab=100.00 E-value=7.3e-38 Score=321.38 Aligned_cols=217 Identities=18% Similarity=0.226 Sum_probs=146.5
Q ss_pred CCCCeeecCCCCCcccccCCCCCcchHHHHHHHHHHHHHHHH-hCCccccCh----------------HHHhhhcCC---
Q 012960 116 DVPASIDWRKKGAVTEVKDQASCGACWAFSATGAIEGINKIV-TGSLVSLSE----------------QELIDCDRS--- 175 (452)
Q Consensus 116 ~lP~s~Dwr~~g~vtpVkdQg~cGsCWAfA~~~alE~~~~~~-~~~~~~lS~----------------q~lvdc~~~--- 175 (452)
..|..|+++..+.+|||||||.||+|||||+++++|+.+.++ ++..++||+ |+|+||...
T Consensus 52 ~~~~~F~~~~~~~vtpVknQg~cGsCWaFs~~~~lE~~~~~~~~~~~~~LSe~yl~~~dklEkan~flq~lvdc~~~~~~ 131 (457)
T 2e01_A 52 QDNRVFNTVVSTDSTPVTNQKSSGRCWLFAATNQLRLNVLSELNLKEFELSQAYLFFYDKLEKANYFLDQIVSSADQDID 131 (457)
T ss_dssp HCCCCCSEECC------------CCHHHHHHHHHHHHHHHHHTTCSSCCBCHHHHHHHHHHHHHHHHHHHHHHTTTSCTT
T ss_pred CCCCceEEEecCCccCcccCCCCccchhHHhHHHHHHHHHHHhCCCceeeCChhhhhhhHHHHHHHHHHHHHHhcCCccc
Confidence 356678888888899999999999999999999999999998 788999999 788999752
Q ss_pred --------CCCCCCCCchHHHHHHHHHhCCcCCCCCCCC-CCC------------------------------C------
Q 012960 176 --------YNSGCGGGLMDYAYQFVIKNHGIDTEKDYPY-RGQ------------------------------A------ 210 (452)
Q Consensus 176 --------~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yPY-~~~------------------------------~------ 210 (452)
.+.||+||.+..++.|+.+ +||++|++||| +.. .
T Consensus 132 ~r~v~~l~~~~gcdGG~~~~a~~~i~k-yGivpe~~yP~~s~~s~ns~~~n~~L~~kLr~~a~~lR~~~~~~~~~~~~l~ 210 (457)
T 2e01_A 132 SRLVQYLLAAPTEDGGQYSMFLNLVKK-YGLIPKDLYGDLPYSTTASRKWNSLLTTKLREFAETLRTALKERSADDSIIV 210 (457)
T ss_dssp SHHHHHHHHCTTCSCBCHHHHHHHHHH-HCCCBGGGSCSCSHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSCTTSHHHH
T ss_pred chhhhhhccCCCCCCCCHHHHHHHHHH-cCccchhhcCCcccCcccHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhHH
Confidence 2789999999999999855 59999999999 321 0
Q ss_pred ------------------CCcccc---cc-------------ccchh-----hhh--------------hccccceEEee
Q 012960 211 ------------------GQCNKQ---KV-------------LHFLT-----SFV--------------LQLNRHIVTID 237 (452)
Q Consensus 211 ------------------~~C~~~---~~-------------~~~~~-----~~~--------------~~~~~~~~~i~ 237 (452)
|.++.. .. ..+.+ .+. ..+..+.+.+.
T Consensus 211 ~~~~~~l~~iy~il~~~LG~pP~~~~~~F~~~~~dkd~~~~~~~~TP~~F~~~~v~~~~~dyV~l~n~p~~py~~~y~ve 290 (457)
T 2e01_A 211 TLREQMQREIFRLMSLFMDIPPVQPNEQFTWEYVDKDKKIHTIKSTPLEFASKYAKLDPSTPVSLINDPRHPYGKLIKID 290 (457)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCSSCTTSCEEEEEECTTSCEEEEEECHHHHHHHTTCCCTTSEEEEECCTTSCTTCEEEET
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCCceEEEEEEcCCCCccCCCcChHHHHHHHcCCCchheEEEeecCCCccCeeEEEe
Confidence 000000 00 00000 000 00011112221
Q ss_pred -----------eeEecCCChH-HHHHHHHHc-CCeEEEEEcCchhhhccCCceEeCCC---------------------C
Q 012960 238 -----------GYKDVPENNE-KQLLQAVVA-QPVSVGICGSERAFQLYSSGIFTGPC---------------------S 283 (452)
Q Consensus 238 -----------~~~~i~~~~~-~~lk~al~~-gPV~v~i~~~~~~f~~Y~sGiy~~~~---------------------~ 283 (452)
.|.+++.+.. +.++.+|+. |||++++++. .|++|++|||+..+ .
T Consensus 291 ~~~N~~~g~~~~y~Nvp~d~l~~~~~~aL~~g~PV~~~~Dv~--~~~~~~~GI~~~~~~~~~~fg~~~~m~KaeRl~~~~ 368 (457)
T 2e01_A 291 RLGNVLGGDAVIYLNVDNETLSKLVVKRLQNNKAVFFGSHTP--KFMDKKTGVMDIELWNYPAIGYNLPQQKASRIRYHE 368 (457)
T ss_dssp TCCSSTTCCCEEEEECCHHHHHHHHHHHHHTTCCEEEEECTT--TTEETTTTEECTTSBCGGGGTCCCCCCHHHHHHTTS
T ss_pred ccCCeecCCceeEEEcCHHHHHHHHHHHHHhCCCEEEEEEcC--HhHcccCceecccccchhhcCcccccCHHHhhccCC
Confidence 1555553322 445567776 6999999996 37789999997654 2
Q ss_pred CCCCceEEEEEEeec-CCe--eEEEEEcCCCCCCCCCcEEEEEecCCCCCCcccccccccccc
Q 012960 284 TSLDHAVLIVGYDSE-NGV--DYWIIKNSWGRSWGMNGYMHMQRNTGNSLGICGINMLASYPT 343 (452)
Q Consensus 284 ~~~~HaV~IVGyg~~-~g~--~yWivkNSWG~~WGe~GY~~i~r~~~~~~~~CgI~~~~~~p~ 343 (452)
+..+|||+|||||.+ +|+ +|||||||||++||++|||+|+|+ .|...+.+++
T Consensus 369 s~~~HAmlivGyg~d~~G~~p~yW~VkNSWG~~wG~~GY~~ms~~--------wf~ey~~~iv 423 (457)
T 2e01_A 369 SLMTAAMLITGCHVDETSKLPLRYRVENSWGKDSGKDGLYVMTQK--------YFEEYCFQIV 423 (457)
T ss_dssp CCCCEEEEEEEEEECTTTCCEEEEEEECSSCTTSTBTTEEEEEHH--------HHHHHEEEEE
T ss_pred CCCCeEEEEEEEEeccCCCccCEEEEEeCccCCcCCCceEEeehh--------hHhhccEEEE
Confidence 457999999999975 788 899999999999999999999986 5655555544
No 43
>3pw3_A Aminopeptidase C; bleomycin, cysteine proteinase fold, structural genomics, JO center for structural genomics, JCSG; HET: MSE; 2.23A {Parabacteroides distasonis}
Probab=100.00 E-value=1.5e-33 Score=283.44 Aligned_cols=192 Identities=23% Similarity=0.308 Sum_probs=135.5
Q ss_pred CcccccCCCCCcchHHHHHHHHHHHHHHHHhCCccccChHHHhhhcCC-----------CCCCCCCCchHHHHHHHHHhC
Q 012960 128 AVTEVKDQASCGACWAFSATGAIEGINKIVTGSLVSLSEQELIDCDRS-----------YNSGCGGGLMDYAYQFVIKNH 196 (452)
Q Consensus 128 ~vtpVkdQg~cGsCWAfA~~~alE~~~~~~~~~~~~lS~q~lvdc~~~-----------~~~gC~GG~~~~a~~~~~~~~ 196 (452)
.++||||||.||+|||||+++++|+.+.++++..++||+|+|++|+.. .+.||+||.+..|+.|+.+.
T Consensus 21 ~vtpVknQg~cGsCWaFSa~~~lE~~~~~k~~~~~~LSeq~Lvdcd~~ekan~~l~~~g~~~gcdGG~~~~a~~~i~k~- 99 (383)
T 3pw3_A 21 PITSVKNQNRAGTCWCYSSYSFLESELLRMGKGEYDLSEMFTVYNTYLDRADAAVRTHGDVSFSQGGSFYDALYGMETF- 99 (383)
T ss_dssp CCCCCCBCCBSSCHHHHHHHHHHHHHHHHTTCCCCCBCHHHHHHHHHHHHHHHHHHTTTCSCCCSCCCHHHHHHHHHHT-
T ss_pred CCCCcccCCCCcHHHHHHhHHHHHHHHHHHcCCCCccChHHHHhhchhhhhhhhhhhccCCCCCCCCCHHHHHHHHHHc-
Confidence 489999999999999999999999999999999999999999999741 25799999999999999764
Q ss_pred CcCCCCCCC------CCCCCC--------------Cc---cc-------ccc------------------------ccc-
Q 012960 197 GIDTEKDYP------YRGQAG--------------QC---NK-------QKV------------------------LHF- 221 (452)
Q Consensus 197 Gi~~e~~yP------Y~~~~~--------------~C---~~-------~~~------------------------~~~- 221 (452)
||++|++|| +..... .. .. ... ..+
T Consensus 100 Givpe~~YP~~~~~~~~s~n~~~m~~~L~~~Lr~~a~~~~r~l~~~~~~~~~~~~~i~~il~~~LG~pP~~F~~~gk~~T 179 (383)
T 3pw3_A 100 GLVPEEEMRPGMMYADTLSNHTELSALTDAMVAAIAKGKLRKLQSDENNAMLWKKAVAAVHQIYLGVPPEKFTYKGKEYT 179 (383)
T ss_dssp CCCBGGGSCTTGGGTCSSCBCHHHHHHHHHHHHHHHSSCCSSCCBCTTCCBHHHHHHHHHHHHHHCCCCSSEEETTEEEC
T ss_pred CcCcHHhCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHhhhhhhchhhHHHHHHHHHHHHHHHhCCCCceEEecCCCcC
Confidence 999999999 221100 00 00 000 000
Q ss_pred hhhhhhc---cccceEEeee----------------------eEecCCChHHHHHH----HHHcC-CeEEEEEcCchhhh
Q 012960 222 LTSFVLQ---LNRHIVTIDG----------------------YKDVPENNEKQLLQ----AVVAQ-PVSVGICGSERAFQ 271 (452)
Q Consensus 222 ~~~~~~~---~~~~~~~i~~----------------------~~~i~~~~~~~lk~----al~~g-PV~v~i~~~~~~f~ 271 (452)
+..+... .....+.+.. |.++| .+.|++ +|.+| ||..+-++....|.
T Consensus 180 P~~F~~~v~~~~~dyV~l~n~p~~py~~~y~ve~~~N~~~g~~~Nvp---~d~l~~~~~~~Lk~G~~V~fg~DV~~~~f~ 256 (383)
T 3pw3_A 180 PKSFFESTGLKASDYVSLTSYTHHPFYTQFPLEIQDNWRHGMSYNLP---LDEFMEVFDNAINTGYTIAWGSDVSESGFT 256 (383)
T ss_dssp HHHHHHHHTCCGGGEEEEECCSSSCTTCEEECCCTTCTTCCEEEECC---HHHHHHHHHHHHHTTCCEEEEEECCSTTBC
T ss_pred HHHHHHHhCCCccceEEEeeCCCCccCceEEEecCCCccCCccCCcC---HHHHHHHHHHHHHcCCcEEEEcccCccccC
Confidence 0000000 0011111111 22333 344444 45567 99999999855555
Q ss_pred ccCCceEeCC-----------------------------------------------CCCCCCceEEEEEEee-cCCeeE
Q 012960 272 LYSSGIFTGP-----------------------------------------------CSTSLDHAVLIVGYDS-ENGVDY 303 (452)
Q Consensus 272 ~Y~sGiy~~~-----------------------------------------------~~~~~~HaV~IVGyg~-~~g~~y 303 (452)
+.||...+ ..+..+|||+|||||. ++|++|
T Consensus 257 --~~Gi~~~~~~~~~~~~~g~~~~~~~~~~kaer~~~~~~~~e~~~tk~~R~~~~d~~~t~~~Ha~~ivG~~~d~~g~~y 334 (383)
T 3pw3_A 257 --RDGVAVMPDDEKVQELSGSDMAHWLKLKPEEKKLNTKPQPQKWCTQAERQLAYDNYETTDDHGMQIYGIAKDQEGNEY 334 (383)
T ss_dssp --TTSEECCBCHHHHHHHSSCCHHHHHTSCHHHHCTTTSCCCBCCCCHHHHHHHHHTTSSCCEEEEEEEEEEECTTCCEE
T ss_pred --CCceeeCcchhhHHHhcCcchhhhccCCHHHhhhccCCCcccCCCHHHHHHHhhhccCcCCeEEEEEEEEEcCCCceE
Confidence 88887211 0124579999999996 578999
Q ss_pred EEEEcCCCCCCCCCcEEEEEec
Q 012960 304 WIIKNSWGRSWGMNGYMHMQRN 325 (452)
Q Consensus 304 WivkNSWG~~WGe~GY~~i~r~ 325 (452)
||||||||++||++|||+|+++
T Consensus 335 w~vkNSWg~~~g~~Gy~~m~~~ 356 (383)
T 3pw3_A 335 YMVKNSWGTNSKYNGIWYASKA 356 (383)
T ss_dssp EEEECSBCSCSTTTTEEEEEHH
T ss_pred EEEEeCCCCCCCcCCeEEecHH
Confidence 9999999999999999999874
No 44
>2jye_A Granulin A; epithelin, human, stack of hairpins, alternative splicing, cytokine, glycoprotein, polymorphism, secreted; NMR {Homo sapiens}
Probab=99.92 E-value=5.9e-26 Score=171.48 Aligned_cols=60 Identities=40% Similarity=1.040 Sum_probs=56.8
Q ss_pred CCccCCCceeeCCCCccccccCCCCccccccccCCCCceecCCCCcccCCCCCcccCCcCceeccc
Q 012960 356 GPTRCSLLTYCAAGETCCCGSSILGICLSWKCCGFSSAVCCSDHRYCCPSNYPICDSVRHQCLTRL 421 (452)
Q Consensus 356 ~p~~c~~~~~c~~~~tcc~~~~~~~~~~~~~cc~~~~~~cc~d~~~ccp~~~~~c~~~~~~c~~~~ 421 (452)
.+++||++++||+++|||++.++. ||||||++||||+|+.||||+|| +||++.|+|+++.
T Consensus 2 ~~v~Cd~~~~Cp~~~TCC~~~~g~-----wgCCPl~~AvCC~D~~hCCP~gy-~Cd~~~g~C~~~~ 61 (72)
T 2jye_A 2 MDVKCDMEVSCPDGYTCCRLQSGA-----WGCCPFTQAVCCEDHIHCCPAGF-TCDTQKGTCEQKL 61 (72)
T ss_dssp CSCCSSTTCCCCTTCCEEECSSSS-----EEECCSSSSTTSSSSSCSSCSSC-CEETTTTEECSSS
T ss_pred CceeCCCCCCCCCCCcccCCCCCC-----CccCCCCCCCccCCCCccCCCCC-eeCCCCCeEeCCC
Confidence 356899999999999999999954 99999999999999999999999 9999999999998
No 45
>2jyv_A Granulin-2, granulin F; granulin C, epithelin, human, stack of hairpins, alternative splicing, cytokine, glycoprotein, polymorphism, secreted; NMR {Homo sapiens}
Probab=99.89 E-value=1.6e-24 Score=163.73 Aligned_cols=60 Identities=33% Similarity=0.847 Sum_probs=26.7
Q ss_pred ccC-CCceeeCCCCccccccCCCCccccccccCCCCceecCCCCcccCCCCCcccCCcCceecccCCC
Q 012960 358 TRC-SLLTYCAAGETCCCGSSILGICLSWKCCGFSSAVCCSDHRYCCPSNYPICDSVRHQCLTRLTGN 424 (452)
Q Consensus 358 ~~c-~~~~~c~~~~tcc~~~~~~~~~~~~~cc~~~~~~cc~d~~~ccp~~~~~c~~~~~~c~~~~~~~ 424 (452)
++| |++++||+++|||++..+ +||||||++||||+||.||||+|| +||++.|+|++++ ++
T Consensus 4 v~CpD~~~~Cp~~~TCC~~~~g-----~wgCCPl~~AvCC~D~~hCCP~gy-~Cd~~~g~C~~~~-~~ 64 (72)
T 2jyv_A 4 IQCPDSQFECPDFSTCCVMVDG-----SWGCCPMPQASCCEDRVHCCPHGA-FCDLVHTRCIKLA-AA 64 (72)
T ss_dssp BCCSSCSSCBCTTEEEEECSSS-----CEEEEECCC--------------------------------
T ss_pred eECCCCCcCCCCCCcccCCCCC-----CEeccCCCCCCcCCCCCccCCCcC-eeCCCCCEEeCCC-CC
Confidence 589 778999999999999753 599999999999999999999999 9999999999998 44
No 46
>2jyt_A Granulin-5, granulin C; epithelin, human, stack of hairpins, alternative splicing, cytokine, glycoprotein, polymorphism, secreted; NMR {Homo sapiens} PDB: 2jyu_A
Probab=99.88 E-value=1.2e-23 Score=157.38 Aligned_cols=58 Identities=40% Similarity=0.997 Sum_probs=51.7
Q ss_pred CccCCCceeeCCCCccccccCCCCccccccccCCCCceecCCCCcccCCCCCcccCCcCceeccc
Q 012960 357 PTRCSLLTYCAAGETCCCGSSILGICLSWKCCGFSSAVCCSDHRYCCPSNYPICDSVRHQCLTRL 421 (452)
Q Consensus 357 p~~c~~~~~c~~~~tcc~~~~~~~~~~~~~cc~~~~~~cc~d~~~ccp~~~~~c~~~~~~c~~~~ 421 (452)
+++||++++||+++|||++.++ +||||||++||||+|+.||||+|| +|+ ..|+|++++
T Consensus 2 ~v~Cd~~~~CP~~~TCC~~~~G-----~wgCCPl~~AvCC~D~~hCCP~gy-~C~-~~g~C~k~~ 59 (69)
T 2jyt_A 2 MVPCDNVSSCPSSDTCCQLTSG-----EWGCCPIPEAVCCSDHQHCCPQGY-TCV-AEGQCQKLA 59 (69)
T ss_dssp -CCSCSSCCCCSSCEEEECSSS-----CEEEECCCCCCCCSSTTCCCSTTC-EEE-TTTEEEC--
T ss_pred cccCCCccCCCCCCeecCCCCC-----CCccCcCCCCCcCCCCCccCCCCC-eeC-CCCcCcCCC
Confidence 4589999999999999999995 499999999999999999999999 995 569999987
No 47
>3f75_P Toxopain-2, cathepsin L propeptide; medical structural genomics of pathogenic protozoa, MSGPP, C protease, parasite, protozoa, hydrolase; 1.99A {Toxoplasma gondii}
Probab=99.75 E-value=2.1e-18 Score=143.11 Aligned_cols=74 Identities=32% Similarity=0.686 Sum_probs=68.7
Q ss_pred chhHHHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhccCCCCceEEecccCCccchHHhhhhhcCcCCC
Q 012960 22 CSDINELFETWCKQHGKAYSSEQEKQQRLKIFEDNYAFVTQHNNMGNSSFTLSLNAFADLTHQEFKASFLGFSAA 96 (452)
Q Consensus 22 ~~~~~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~~N~~~~~s~~lg~N~fsDlt~eEf~~~~l~~~~~ 96 (452)
+..+..+|++|+++|+|.|.+.+|+..|+.||++|+++|++||++ +.+|++|+|+|||||.|||++.++|.+..
T Consensus 18 ~~~~~~~F~~wk~~~~K~Y~~~~E~~~R~~iF~~Nl~~I~~hN~~-~~sy~lglN~FaDLT~eEF~~~~lg~~~~ 91 (106)
T 3f75_P 18 EAHFQDAFSSFQAMYAKSYATEEEKQRRYAIFKNNLVYIHTHNQQ-GYSYSLKMNHFGDLSRDEFRRKYLGFKKS 91 (106)
T ss_dssp HHHHHHHHHHHHHHHTCCCSSHHHHHHHHHHHHHHHHHHHHHHTS-CCSEEECCCTTTTCCHHHHHHHSCCBCC-
T ss_pred cHHHHHHHHHHHHHhCCcCCCHHHHHHHHHHHHHHHHHHHHHHhc-CCCeeeCCcccccCCHHHHHHHHcCCCCC
Confidence 567888999999999999999899999999999999999999998 89999999999999999999998886654
No 48
>2l95_A Crammer, LP06209P; cysteine proteinase inhibitor, intrinsic disorder P like protein, hydrolase; NMR {Drosophila melanogaster}
Probab=99.70 E-value=1.2e-17 Score=132.28 Aligned_cols=67 Identities=28% Similarity=0.522 Sum_probs=61.0
Q ss_pred HHHHHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHhccC---CCCceEEecccCCccchHHhhhhhcCcC
Q 012960 26 NELFETWCKQHGKAYSSEQEKQQRLKIFEDNYAFVTQHNNM---GNSSFTLSLNAFADLTHQEFKASFLGFS 94 (452)
Q Consensus 26 ~~~f~~~~~~~~K~Y~~~~E~~~R~~iF~~N~~~I~~~N~~---~~~s~~lg~N~fsDlt~eEf~~~~l~~~ 94 (452)
..+|++|+.+|+|.|.+.+|+..| .||++|+++|++||++ ++.+|++|+|+|+|||.||| +.++|..
T Consensus 7 ~~~f~~~k~~~~K~Y~~~~E~~~R-~iF~~N~~~I~~hN~~~~~g~~sy~lg~N~FaDlT~eEf-~~~~g~~ 76 (80)
T 2l95_A 7 DEEWVEYKSKFDKNYEAEEDLMRR-RIYAESKARIEEHNRKFEKGEVTWKMGINHLADLTPEEF-AQRSGKK 76 (80)
T ss_dssp HHHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHHTTGGGTSCCCCCCCCGGGTSSHHHH-HHHHTSC
T ss_pred HHHHHHHHHHhCCCCCCHHHHHHH-HHHHHHHHHHHHHHHHhccCCCCeEecCcccccCCHHHH-HHHhCCC
Confidence 468999999999999988899999 9999999999999986 45789999999999999999 8877754
No 49
>1fwo_A Oryzain beta chain; beta-hairpin stack fold, granulin/epithelin-like protein repeats, hydrolase; NMR {Synthetic} SCOP: g.3.16.1
Probab=99.46 E-value=1.6e-14 Score=93.42 Aligned_cols=34 Identities=26% Similarity=0.593 Sum_probs=32.6
Q ss_pred ccCCCceeeCCCCccccccCCCCccccccccCCC
Q 012960 358 TRCSLLTYCAAGETCCCGSSILGICLSWKCCGFS 391 (452)
Q Consensus 358 ~~c~~~~~c~~~~tcc~~~~~~~~~~~~~cc~~~ 391 (452)
++||++++||+++||||+.+++++|++||||||+
T Consensus 2 ~~CD~~~sCP~~~TCCc~~~~~~~C~~WGCCPle 35 (35)
T 1fwo_A 2 HVCDDNFSCPAGSTCSSAFGFRNLSLVWGCSPVE 35 (35)
T ss_dssp CCSSSSCCCCSSSEECCCCCSSCSSCCCCEECCC
T ss_pred ccCCCcccCCCCCcEEeeeccCCccceEeCccCC
Confidence 5799999999999999999999999999999985
No 50
>1g26_A Granulin A, HGA; granulin/epithelin protein repeats, beta-hairpin stack, cytokine; NMR {Synthetic} SCOP: g.3.16.1
Probab=99.12 E-value=7.4e-12 Score=79.22 Aligned_cols=31 Identities=35% Similarity=0.933 Sum_probs=27.6
Q ss_pred CccCCCceeeCCCCccccccCCCCccccccccCCCC
Q 012960 357 PTRCSLLTYCAAGETCCCGSSILGICLSWKCCGFSS 392 (452)
Q Consensus 357 p~~c~~~~~c~~~~tcc~~~~~~~~~~~~~cc~~~~ 392 (452)
+++||++++||+++|||++..+ +||||||++
T Consensus 1 ~v~Cd~~~~Cp~~~TCC~~~~g-----~wgCCP~~~ 31 (31)
T 1g26_A 1 VVHCDMEVICPDGYTCCRLPSG-----AWGCCPFTQ 31 (31)
T ss_dssp CEEEETTEEECTTEEEEECTTS-----CEEEEECCC
T ss_pred CeeCCCCCccCCCCeecCCCCC-----CeEcCCCCC
Confidence 3589999999999999999974 599999985
No 51
>1i8x_A Granulin-1; two beta-hairpin stack, cytokine; NMR {Synthetic} SCOP: g.3.16.1 PDB: 1qgm_A 1i8y_A
Probab=99.05 E-value=3.1e-11 Score=75.31 Aligned_cols=29 Identities=34% Similarity=0.767 Sum_probs=26.0
Q ss_pred ccCCCceeeCCCCccccccCCCCccccccccCCC
Q 012960 358 TRCSLLTYCAAGETCCCGSSILGICLSWKCCGFS 391 (452)
Q Consensus 358 ~~c~~~~~c~~~~tcc~~~~~~~~~~~~~cc~~~ 391 (452)
++||+.++||+++|||++..+ +||||||+
T Consensus 2 v~CD~~~~CP~~~TCC~~~~G-----~WGCCP~~ 30 (30)
T 1i8x_A 2 IHCDAATICPDGTTCSLSPYG-----VWYCSPFS 30 (30)
T ss_dssp CCTTTTCCCCTTEEEEECTTS-----CEEEEECC
T ss_pred ccCCCCccCCCCCeeeccCCC-----CEecCcCC
Confidence 479999999999999998875 59999986
No 52
>1pxv_A Cysteine protease; hydrolase; 1.80A {Staphylococcus aureus} SCOP: d.3.1.1 PDB: 1y4h_A
Probab=96.96 E-value=0.011 Score=52.21 Aligned_cols=128 Identities=19% Similarity=0.224 Sum_probs=86.6
Q ss_pred CCCCCcchHHHHHHHHHHHHHH--------HHhCCccccChHHHhhhcCCCCCCCCCCchHHHHHHHHHhCCcCCCCCCC
Q 012960 134 DQASCGACWAFSATGAIEGINK--------IVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKNHGIDTEKDYP 205 (452)
Q Consensus 134 dQg~cGsCWAfA~~~alE~~~~--------~~~~~~~~lS~q~lvdc~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yP 205 (452)
.||.-+=|-+|+.++.|-+... +.+.....+|+|+|.++ |..+...++|+.. .|...
T Consensus 26 TQg~~~WCa~Y~~aAilN~~~nt~~~nA~~iMr~~yPN~s~~~l~~t---------~~~~~q~Iky~~s-~G~~~----- 90 (183)
T 1pxv_A 26 QQFDNSWAAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPNC---------ATFPNQMIEYGKS-QGRDI----- 90 (183)
T ss_dssp CCCSSSCHHHHHHHHHHHHHHTCSCCCHHHHHHHHSTTSCTTTGGGC---------CBCHHHHHHHHHH-TTCCC-----
T ss_pred ccCcCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCChhHHhhc---------CCCHHHHHHHHHH-cCcCh-----
Confidence 5999999999999998876542 22223467899888873 4568889999864 35321
Q ss_pred CCCCCCCccccccccchhhhhhccccceEEeeeeEecCCChHHHHHHHHHcC-CeEEEEEcCchhhhccCCceEeCCCCC
Q 012960 206 YRGQAGQCNKQKVLHFLTSFVLQLNRHIVTIDGYKDVPENNEKQLLQAVVAQ-PVSVGICGSERAFQLYSSGIFTGPCST 284 (452)
Q Consensus 206 Y~~~~~~C~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~lk~al~~g-PV~v~i~~~~~~f~~Y~sGiy~~~~~~ 284 (452)
. -..+. -+.+.+++.+.++ ||.|...-.. ......
T Consensus 91 -----------~--------------------~~nr~--ls~neV~~~i~~Nk~I~v~~~~v~-----------e~~~~~ 126 (183)
T 1pxv_A 91 -----------H--------------------YQEGV--PSYNQVDQLTKDNVGIMILAQSVS-----------QNPNDP 126 (183)
T ss_dssp -----------E--------------------EEESC--CCHHHHHHHHHTTCCEEEEEECCC-----------SSTTSC
T ss_pred -----------h--------------------HhcCC--CCHHHHHHHHhcCCcEEEEccccc-----------cCCCCc
Confidence 0 00111 2457788888875 9988765431 112233
Q ss_pred CCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEEec
Q 012960 285 SLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQRN 325 (452)
Q Consensus 285 ~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~r~ 325 (452)
..+||++||||-.-++.++.+|=|=|-. |++-+.-+
T Consensus 127 ~~gHA~av~Gya~~~~~~~y~~WNPW~~-----~~~~~~a~ 162 (183)
T 1pxv_A 127 HLGHALAVVGNAKINDQEKLIYWNPWDT-----ELSIQDAD 162 (183)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEECTTCS-----SCEEEETT
T ss_pred cCceeEEEEeeeecCCCeEEEEeCCccC-----CcEeecCC
Confidence 6799999999998778899999777643 67766543
No 53
>1x9y_A Cysteine proteinase; half-barrel, barrel-sandwich-hybrid, hydrolase; 2.50A {Staphylococcus aureus} SCOP: d.3.1.1 d.17.1.4
Probab=96.74 E-value=0.033 Score=54.26 Aligned_cols=120 Identities=22% Similarity=0.302 Sum_probs=80.8
Q ss_pred cCCCCCcchHHHHHHHHHHHHHH--------HHhCCccccChHHHhhhcCCCCCCCCCCchHHHHHHHHHhCCcCCCCCC
Q 012960 133 KDQASCGACWAFSATGAIEGINK--------IVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKNHGIDTEKDY 204 (452)
Q Consensus 133 kdQg~cGsCWAfA~~~alE~~~~--------~~~~~~~~lS~q~lvdc~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~y 204 (452)
..||.-+=|-+|+.++.|-+... +.+.-...+|+++|.++ |..+...++|+. .+|...
T Consensus 201 ETQg~~pWCa~Ya~aailN~~~~t~~~nA~~iMr~~yPN~S~~~l~~t---------s~~~~q~Iky~q-syG~~~---- 266 (367)
T 1x9y_A 201 EQQFDNSWCAGFSMAALLNATKNTDTYNAHDIMRTLYPEVSEQDLPNC---------ATFPNQMIEYGK-SQGRDI---- 266 (367)
T ss_dssp CCCSSSSCHHHHHHHHHHHHHTTCSCCCHHHHHHHHCTTSCTTTGGGC---------CCCHHHHHHHHH-HTTEEE----
T ss_pred eccCCCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCChhHHhhc---------CCCHHHHHHHHH-HhCcch----
Confidence 46999999999999998876531 22223467888888873 456888899986 445321
Q ss_pred CCCCCCCCccccccccchhhhhhccccceEEeeeeEecCCChHHHHHHHHHc-CCeEEEEEcCchhhhccCCceEeCCCC
Q 012960 205 PYRGQAGQCNKQKVLHFLTSFVLQLNRHIVTIDGYKDVPENNEKQLLQAVVA-QPVSVGICGSERAFQLYSSGIFTGPCS 283 (452)
Q Consensus 205 PY~~~~~~C~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~lk~al~~-gPV~v~i~~~~~~f~~Y~sGiy~~~~~ 283 (452)
+-....+ +.+.+++.+.. -||.|.+...... ...
T Consensus 267 --------------------------------~~~n~~l--s~deVk~~id~Nk~I~v~~~~v~~~-----------~n~ 301 (367)
T 1x9y_A 267 --------------------------------HYQEGVP--SYNQVDQLTKDNVGIMILAQSVSQN-----------PND 301 (367)
T ss_dssp --------------------------------EEEESCC--CHHHHHHHHHTTCCEEEEEEETTSC-----------SSS
T ss_pred --------------------------------hhhcCCC--CHHHHHHHHhcCCcEEEEccccccC-----------CCC
Confidence 1111122 45677777776 5999888754211 122
Q ss_pred CCCCceEEEEEEeecCCeeEEEEEcCCC
Q 012960 284 TSLDHAVLIVGYDSENGVDYWIIKNSWG 311 (452)
Q Consensus 284 ~~~~HaV~IVGyg~~~g~~yWivkNSWG 311 (452)
...+|||+||||...++.+|.++=|=|-
T Consensus 302 ~~~gHAlavvGyA~~~~~~~y~~WNPW~ 329 (367)
T 1x9y_A 302 PHLGHALAVVGNAKINDQEKLIYWNPWD 329 (367)
T ss_dssp CCCSEEEEEEEEEEETTEEEEEEECTTC
T ss_pred ccCceeEEEEeccccCCCcEEEEecCcc
Confidence 3569999999998777889999966664
No 54
>1cv8_A Staphopain; cysteine protease, thiol protease, papain family; HET: E64; 1.75A {Staphylococcus aureus} SCOP: d.3.1.1
Probab=96.36 E-value=0.094 Score=46.21 Aligned_cols=118 Identities=16% Similarity=0.177 Sum_probs=79.4
Q ss_pred CCCCCcchHHHHHHHHHHHHHH--------HHhCCccccChHHHhhhcCCCCCCCCCCchHHHHHHHHHhCCcCCCCCCC
Q 012960 134 DQASCGACWAFSATGAIEGINK--------IVTGSLVSLSEQELIDCDRSYNSGCGGGLMDYAYQFVIKNHGIDTEKDYP 205 (452)
Q Consensus 134 dQg~cGsCWAfA~~~alE~~~~--------~~~~~~~~lS~q~lvdc~~~~~~gC~GG~~~~a~~~~~~~~Gi~~e~~yP 205 (452)
.||.=+=|-+|+.++.|-+... +.+.-...+|+++|..+ |..+...++|+.+. |-..
T Consensus 17 TQg~~pWCa~Ya~aailN~~~~~~~~~A~~imr~~yPn~S~~~l~~~---------~~t~~e~iky~~s~-g~~~----- 81 (174)
T 1cv8_A 17 TQGNNGWCAGYTMSALLNATYNTNKYHAEAVMRFLHPNLQGQQFQFT---------GLTPREMIYFGQTQ-GRSP----- 81 (174)
T ss_dssp CCCSSSCHHHHHHHHHHHHHHTCCCCCHHHHHHHHCSSCCHHHHHHC---------CCCHHHHHHHHHHT-TCCC-----
T ss_pred ccCCCchHHHHHHHHHHHhhhccCcCCHHHHHHHHCCCCCHHHHhhc---------CCCHHHHHHHHHHc-CCCh-----
Confidence 5999999999999999876542 22223467999999854 34577888997554 3210
Q ss_pred CCCCCCCccccccccchhhhhhccccceEEeeeeEecCCChHHHHHHHHHcC-CeEEEEEcCchhhhccCCceEeCCCCC
Q 012960 206 YRGQAGQCNKQKVLHFLTSFVLQLNRHIVTIDGYKDVPENNEKQLLQAVVAQ-PVSVGICGSERAFQLYSSGIFTGPCST 284 (452)
Q Consensus 206 Y~~~~~~C~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~lk~al~~g-PV~v~i~~~~~~f~~Y~sGiy~~~~~~ 284 (452)
.. . .+. -+.+++++++.++ ||.|..+.. +. ....
T Consensus 82 ----------~~------------~---------n~~--ls~~eV~~~~~~nk~i~i~~~~v-e~-----------~~~~ 116 (174)
T 1cv8_A 82 ----------QL------------L---------NRM--TTYNEVDNLTKNNKGIAILGSRV-ES-----------RNGM 116 (174)
T ss_dssp ----------EE------------E---------SSC--CCHHHHHHHHHTTCCEEEEEEES-SC-----------BTTB
T ss_pred ----------hh------------h---------cCC--CCHHHHHHHHhcCCceEEEcccc-cC-----------CCCC
Confidence 00 0 011 2456788888875 888766543 11 1123
Q ss_pred CCCceEEEEEEee-cCCeeEEEEEcCCC
Q 012960 285 SLDHAVLIVGYDS-ENGVDYWIIKNSWG 311 (452)
Q Consensus 285 ~~~HaV~IVGyg~-~~g~~yWivkNSWG 311 (452)
..+||++||||-. .+|.+|.++=|=|-
T Consensus 117 ~~gHAlav~Gy~~~~ng~~~y~~WNPW~ 144 (174)
T 1cv8_A 117 HAGHAMAVVGNAKLNNGQEVIIIWNPWD 144 (174)
T ss_dssp CCEEEEEEEEEEEETTSCEEEEEECTTC
T ss_pred CCceeEEEEeeeeecCCceEEEEeCCcc
Confidence 5689999999997 47789999977764
No 55
>3erv_A Putative C39-like peptidase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.10A {Bacillus anthracis}
Probab=87.58 E-value=1.3 Score=41.29 Aligned_cols=64 Identities=25% Similarity=0.406 Sum_probs=38.4
Q ss_pred EecCCChHHHHHHHHHcC-CeEEEEEcCch-----hhhcc--CCceEeCCCCCCCCceEEEEEEeecCCeeEEEEEcCC
Q 012960 240 KDVPENNEKQLLQAVVAQ-PVSVGICGSER-----AFQLY--SSGIFTGPCSTSLDHAVLIVGYDSENGVDYWIIKNSW 310 (452)
Q Consensus 240 ~~i~~~~~~~lk~al~~g-PV~v~i~~~~~-----~f~~Y--~sGiy~~~~~~~~~HaV~IVGyg~~~g~~yWivkNSW 310 (452)
.++...+.++|++.|.+| ||.|-+..... .|+.+ .+|-.. -...+|+|+|+||++. ..+|-+.+
T Consensus 125 ~dltG~sl~~L~~~I~~G~PVIv~~t~~~~p~~~~~~~~W~~~~G~~~---~~~~~H~VVl~GYd~~----~vyi~DP~ 196 (236)
T 3erv_A 125 VDLTGKSIEELYKSVKAGQPVVIITNATFAPLDEDEFTTWETNNGDVS---ITYNEHCVVLIGYDQE----SVYIRDPL 196 (236)
T ss_dssp EECTTSCHHHHHHHHHTTCCEEEEEETTSSCCCGGGCEEEEETTEEEE---ECTTEEEEEEEEECSS----EEEEECTT
T ss_pred eecCCCCHHHHHHHHHCCCeEEEEEeCCcccccccccceeecCCCcee---eccCCeEEEEEEEeCC----EEEEECCC
Confidence 345556789999999998 99886654210 12111 122211 0235899999999863 34455554
No 56
>3bb7_A Interpain A; cysteine protease, zymogen activation, bacterial odontopatho hydrolase; 1.50A {Prevotella intermedia} PDB: 3bba_A
Probab=51.39 E-value=23 Score=34.29 Aligned_cols=58 Identities=17% Similarity=0.413 Sum_probs=35.3
Q ss_pred HHHHHHHHcC-CeEEEEEcCchhhhccCCceEeCCCCCCCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEE
Q 012960 248 KQLLQAVVAQ-PVSVGICGSERAFQLYSSGIFTGPCSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQ 323 (452)
Q Consensus 248 ~~lk~al~~g-PV~v~i~~~~~~f~~Y~sGiy~~~~~~~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~ 323 (452)
+.|++.|.+| ||.+.-.. ... . ....+||.+|-||+.+ +||=|==.||-. .+|||.+.
T Consensus 239 ~~i~~eL~~~rPV~~~G~~--~~~------~-----~~~~GHafV~DGY~~~---~~~H~NwGWgG~--~nGyy~l~ 297 (321)
T 3bb7_A 239 DIVFSELTKGHPLIYGGVS--PGS------M-----GQDAGHAFVIDGYNKA---GLVSVNWGWNGD--VDGYYKID 297 (321)
T ss_dssp HHHHHHHHTTCCEEEEEC--------------------CCCEEEEEEEECTT---SCEEEECSSTTT--TCEEECCT
T ss_pred HHHHHHHHhCCCEEEEEec--CCC------C-----CCCCceEEEEccccCC---CeEEEecCCCCC--CCceEecc
Confidence 4577778775 98764321 111 0 1356999999999864 566664444422 38999885
No 57
>4d8b_A Streptopain; papain fold, cysteine protease, secreted, hydrolase; 1.06A {Streptococcus pyogenes} PDB: 4d8e_A* 4d8i_A* 2uzj_A* 2jtc_A
Probab=51.26 E-value=21 Score=33.58 Aligned_cols=52 Identities=27% Similarity=0.652 Sum_probs=36.0
Q ss_pred HHHHHHHHcC-CeEEEEEcCchhhhccCCceEeCCCCCCCCceEEEEEEeecCCeeEEEEEcCCCCCCC--CCcEEEEEe
Q 012960 248 KQLLQAVVAQ-PVSVGICGSERAFQLYSSGIFTGPCSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWG--MNGYMHMQR 324 (452)
Q Consensus 248 ~~lk~al~~g-PV~v~i~~~~~~f~~Y~sGiy~~~~~~~~~HaV~IVGyg~~~g~~yWivkNSWG~~WG--e~GY~~i~r 324 (452)
+.|++.|.+| ||.++-.. +..+||.+|=||+.+ +|+-|- || || .+|||.+.-
T Consensus 172 ~~I~~eL~~grPV~~~G~~------------------~~gGHAwViDGY~~~---~~~H~N--wG--WgG~~nGYy~l~~ 226 (261)
T 4d8b_A 172 AQIDKELSQNQPVYYQGVG------------------KVGGHAFVIDGADGR---NFYHVN--WG--WGGVSDGFFRLDA 226 (261)
T ss_dssp HHHHHHHHTTCCEEEEEEE------------------TTEEEEEEEEEEESS---SCEEEE--CS--STTTTCEEECTTC
T ss_pred HHHHHHHHcCCCEEEEeec------------------CCCceEEEEcccccC---CEEEEE--cC--CCCCCCceeeccc
Confidence 5677788875 99765421 145899999999854 466553 54 43 589999853
No 58
>1dki_A Pyrogenic exotoxin B zymogen; cysteine protease, papain-like; 1.60A {Streptococcus pyogenes} SCOP: d.3.1.1 PDB: 1pvj_A*
Probab=50.82 E-value=26 Score=34.66 Aligned_cols=53 Identities=23% Similarity=0.480 Sum_probs=35.0
Q ss_pred HHHHHHHHcC-CeEEEEEcCchhhhccCCceEeCCCCCCCCceEEEEEEeecCCeeEEEEEcCCCCCCCCCcEEEEE
Q 012960 248 KQLLQAVVAQ-PVSVGICGSERAFQLYSSGIFTGPCSTSLDHAVLIVGYDSENGVDYWIIKNSWGRSWGMNGYMHMQ 323 (452)
Q Consensus 248 ~~lk~al~~g-PV~v~i~~~~~~f~~Y~sGiy~~~~~~~~~HaV~IVGyg~~~g~~yWivkNSWG~~WGe~GY~~i~ 323 (452)
+.|++.|.+| ||.+.-.. ...+||.+|=||+.+ +||=|==.||-. .+|||.+.
T Consensus 290 ~~i~~eL~~~rPV~~~G~~------------------~~gGHAfV~DGy~~~---~~~H~NwGWgG~--~nGyy~l~ 343 (371)
T 1dki_A 290 AQIDKELSQNQPVYYQGVG------------------KVGGHAFVIDGADGR---NFYHVNWGWGGV--SDGFFRLD 343 (371)
T ss_dssp HHHHHHHHTTCCEEEEEEE------------------TTEEEEEEEEEECSS---SEEEEECSSTTT--TCEEEESC
T ss_pred HHHHHHHHcCCCEEEEeec------------------CCCceEEEECcccCC---CeEEEEeCcCCC--CCcceecc
Confidence 4677778875 98653321 025899999999853 566664344422 58999985
No 59
>2jmv_A Scytovirin; protein, sugar binding protein, antiviral protein; NMR {Scytonema varium} PDB: 2qsk_A 2qt4_A
Probab=42.85 E-value=24 Score=26.62 Aligned_cols=9 Identities=33% Similarity=0.604 Sum_probs=5.4
Q ss_pred ccccccccC
Q 012960 381 ICLSWKCCG 389 (452)
Q Consensus 381 ~~~~~~cc~ 389 (452)
.|.++|.|.
T Consensus 79 TCSs~G~CQ 87 (95)
T 2jmv_A 79 TCSSSGFCQ 87 (95)
T ss_dssp CSSSSSSSS
T ss_pred eeccccccc
Confidence 455566665
No 60
>1omc_A Omega-conotoxin GVIA; presynaptic neurotoxin; HET: HYP; NMR {Conus geographus} SCOP: g.3.6.1 PDB: 1ttl_A* 2cco_A* 1tr6_A*
Probab=40.80 E-value=13 Score=22.34 Aligned_cols=20 Identities=30% Similarity=0.916 Sum_probs=14.6
Q ss_pred cCCCCcccCCCCCcccCCcCcee
Q 012960 396 CSDHRYCCPSNYPICDSVRHQCL 418 (452)
Q Consensus 396 c~d~~~ccp~~~~~c~~~~~~c~ 418 (452)
|.-+.||| .+ .|+...++|.
T Consensus 8 C~~~~~CC-s~--~C~~~~~~C~ 27 (28)
T 1omc_A 8 CSPTSYNC-CR--SCNPYTKRCY 27 (28)
T ss_dssp CCTTTTCB-SS--CEETTTTEEC
T ss_pred cCCCccHH-HH--HHcchhCEeC
Confidence 35577899 44 5998888884
No 61
>1ntx_A Alpha-neurotoxin; NMR {Dendroaspis polylepis polylepis} SCOP: g.7.1.1
Probab=34.00 E-value=9.8 Score=27.31 Aligned_cols=26 Identities=23% Similarity=0.595 Sum_probs=18.5
Q ss_pred ccccccc-cCCCCceecCCCCcccCCCCCccc
Q 012960 381 ICLSWKC-CGFSSAVCCSDHRYCCPSNYPICD 411 (452)
Q Consensus 381 ~~~~~~c-c~~~~~~cc~d~~~ccp~~~~~c~ 411 (452)
+=...|| ||-+.. ...++||..|. ||
T Consensus 33 ~~i~rGCaCP~~~~---~~~v~CCsTD~--CN 59 (60)
T 1ntx_A 33 TIIERGCGCPKVKP---GVGIHCCQSDK--CN 59 (60)
T ss_dssp EEEEEEESCCCCCT---TSEEEEESSTT--CC
T ss_pred CEEeeECcCCCCCC---CcEEEecCCCC--CC
Confidence 3466799 998765 23678888884 76
No 62
>2vwa_A Putative uncharacterized protein PF13_0012; unknown function; HET: PTY; 2.5A {Plasmodium falciparum}
Probab=33.29 E-value=19 Score=27.78 Aligned_cols=28 Identities=21% Similarity=0.274 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCceEEecccCCccchHHh
Q 012960 46 KQQRLKIFEDNYAFVTQHNNMGNSSFTLSLNAFADLTHQEF 86 (452)
Q Consensus 46 ~~~R~~iF~~N~~~I~~~N~~~~~s~~lg~N~fsDlt~eEf 86 (452)
-.+||.+|.+|.+...+| +|++|+.+.-
T Consensus 20 piKrfN~F~Dn~rla~qh-------------HF~~LSn~Qq 47 (101)
T 2vwa_A 20 SIKRYNNFVDIARLSIQK-------------HFEHLSNDQK 47 (101)
T ss_dssp CHHHHHHHHHHHHHHHHH-------------HHHHSCHHHH
T ss_pred cHHHHHHHHHHHHHHHHH-------------HHHhcCcHHH
Confidence 368999999999987777 5788887754
No 63
>1ug4_A Cytotoxin 6, cardiotoxin VI; cobra, venom; 1.60A {Naja atra} PDB: 1h0j_A* 1i02_A 1xt3_A* 2bhi_A* 2crs_A 2crt_A 1cxn_A 1cxo_A 1tgx_A 1cb9_A 1ccq_A 1ffj_A 1chv_S 2ccx_A 1cre_A 1crf_A 1kbs_A 1kbt_A 1rl5_A 1zad_A ...
Probab=30.94 E-value=19 Score=25.68 Aligned_cols=47 Identities=26% Similarity=0.495 Sum_probs=28.9
Q ss_pred CCCceeeCCCCc-ccccc-CC-CCccccccc---cCCCCceecCCCCcccCCCCCccc
Q 012960 360 CSLLTYCAAGET-CCCGS-SI-LGICLSWKC---CGFSSAVCCSDHRYCCPSNYPICD 411 (452)
Q Consensus 360 c~~~~~c~~~~t-cc~~~-~~-~~~~~~~~c---c~~~~~~cc~d~~~ccp~~~~~c~ 411 (452)
|.....||+|++ |=... .. .++=.+.|| ||-++. ...++||..|. ||
T Consensus 8 ~~~~~tC~~g~~~Cyk~~~~~~~g~~i~rGCa~tCP~~~~---~~~v~CC~TD~--CN 60 (60)
T 1ug4_A 8 PPFYKTCAAGKNLCYKMFMVAAPKVPVKRGCIDVCPKSSL---LVKYVCCNTDR--CN 60 (60)
T ss_dssp TTSEEECCTTCCEEEEEEETTEEEEEEEEEEESSCCCCCS---SEEEEEECSTT--CC
T ss_pred CCCCEEcCCCcCeEeeeEEecCCCCEEECCccCcCcCCCC---CceeEecCCCC--CC
Confidence 445678999887 54321 11 133466799 997665 23678888774 64
No 64
>1mr6_A Neurotoxin; venom; NMR {Bungarus multicinctus} SCOP: g.7.1.1
Probab=28.63 E-value=50 Score=23.87 Aligned_cols=47 Identities=26% Similarity=0.661 Sum_probs=28.9
Q ss_pred CCCceeeCCCCccccccCCC---C----ccccccc---cCCCCceecCCCCcccCCCCCccc
Q 012960 360 CSLLTYCAAGETCCCGSSIL---G----ICLSWKC---CGFSSAVCCSDHRYCCPSNYPICD 411 (452)
Q Consensus 360 c~~~~~c~~~~tcc~~~~~~---~----~~~~~~c---c~~~~~~cc~d~~~ccp~~~~~c~ 411 (452)
|.....||+|++=|-..... + +=.+.|| ||-.+. ...++||-.|. ||
T Consensus 11 ~~~~~tCp~g~~~C~~~~~~~~~g~~~~~~i~rGCa~tCp~~~~---~~~v~CC~TD~--CN 67 (68)
T 1mr6_A 11 CPNSETCPDGKNICVKRSWTAVRGDGPKREIRRECAATCPPSKL---GLTVFCCTTDN--CN 67 (68)
T ss_dssp CCSCCBCCTTCCCEEEECCBCCSSSCCSBCCEEEECSSSSSCCS---SSCCCCBSSSS--CC
T ss_pred CccccEeCCCCCEEEEEEEecccCccccceEeCCccCcCcCCCC---CceeEecCCCC--CC
Confidence 44456799888766222111 1 3346789 886554 34778999884 76
No 65
>2e4u_A Metabotropic glutamate receptor 3; G-protein-coupled receptor, neuron, central nerve system, SI protein; HET: NAG GLU; 2.35A {Rattus norvegicus} PDB: 2e4v_A* 2e4w_A* 2e4x_A* 2e4y_A*
Probab=27.43 E-value=32 Score=35.36 Aligned_cols=50 Identities=26% Similarity=0.625 Sum_probs=33.9
Q ss_pred CCccCCCceeeCCC--------CccccccCCCCccccccc--cCCCCceecCCCCcc--cCCCCCcccCCcCceeccc
Q 012960 356 GPTRCSLLTYCAAG--------ETCCCGSSILGICLSWKC--CGFSSAVCCSDHRYC--CPSNYPICDSVRHQCLTRL 421 (452)
Q Consensus 356 ~p~~c~~~~~c~~~--------~tcc~~~~~~~~~~~~~c--c~~~~~~cc~d~~~c--cp~~~~~c~~~~~~c~~~~ 421 (452)
|.++|.. +||.| ..|| |.| ||--+-. .|..+| ||.+. -=|..+..|+...
T Consensus 481 P~S~CS~--~C~pG~rk~~~~g~~CC-----------~~C~~C~~~~~~--td~~~C~~Cp~~~-wpn~~~~~C~~k~ 542 (555)
T 2e4u_A 481 PTSQCSD--PCAPNEMKNMQPGDVCC-----------WICIPCEPYEYL--VDEFTCMDCGPGQ-WPTADLSGCYNLP 542 (555)
T ss_dssp CCCCSSC--CCCTTTEEEECCSSSSC-----------CEEEECCTTEEE--EETTEEEECCTTE-EECTTSSSEEECC
T ss_pred cceeeCC--CCCCCeeeeecCCCeeE-----------EECccCCCceec--CCCccceeCCccc-CcCCCcCcccCCC
Confidence 3457874 48754 3787 555 4422222 688899 99996 7788889998876
No 66
>1cvo_A Cardiotoxin V; cytotoxin; NMR {Naja atra} SCOP: g.7.1.1 PDB: 1kxi_A
Probab=27.20 E-value=28 Score=24.85 Aligned_cols=47 Identities=23% Similarity=0.569 Sum_probs=28.6
Q ss_pred CCCceeeCCCCc-ccccc-C-C-CCccccccc---cCCCCceecCCCCcccCCCCCccc
Q 012960 360 CSLLTYCAAGET-CCCGS-S-I-LGICLSWKC---CGFSSAVCCSDHRYCCPSNYPICD 411 (452)
Q Consensus 360 c~~~~~c~~~~t-cc~~~-~-~-~~~~~~~~c---c~~~~~~cc~d~~~ccp~~~~~c~ 411 (452)
|.....||+|++ |=... . . .|.=.+.|| ||-.+. ...++||..|. ||
T Consensus 9 ~~~~~tC~~g~~~Cyk~~~~~~~~g~~i~rGCa~tCp~~~~---~~~i~CC~TD~--CN 62 (62)
T 1cvo_A 9 PFIYKTCPEGKNLCFKATLKKFPLKFPVKRGCADNCPKNSA---LLKYVCCSTDK--CN 62 (62)
T ss_dssp SSCCEECCTTCCEEEEEEETTSSSCCCEEEEEESSCCCCCT---TEEEEEESSTT--CC
T ss_pred CCcCeEcCCCcCEEeeeEEeCCCCCcEEeCCccCcCcCCCC---CcEeEecCCCC--CC
Confidence 445667998887 43321 1 1 234466899 997665 23567888774 64
No 67
>2h7z_B Irditoxin subunit B; three-finger toxin, neurotoxin, snake venom; 1.50A {Boiga irregularis} SCOP: g.7.1.1
Probab=26.05 E-value=45 Score=24.98 Aligned_cols=49 Identities=16% Similarity=0.378 Sum_probs=30.8
Q ss_pred cCCCceeeCCCCccccccCC----CCcc-ccccc---cCCCCceecCCCCcccCCCCCcccC
Q 012960 359 RCSLLTYCAAGETCCCGSSI----LGIC-LSWKC---CGFSSAVCCSDHRYCCPSNYPICDS 412 (452)
Q Consensus 359 ~c~~~~~c~~~~tcc~~~~~----~~~~-~~~~c---c~~~~~~cc~d~~~ccp~~~~~c~~ 412 (452)
.|.....||+|++=|-.... .|.= ...|| ||-.+. ...++||-.|. ||.
T Consensus 20 ~c~~~~tCp~g~~~Cyk~~~~~~~~g~~~i~rGCa~tCp~~~~---~~~v~CC~TD~--CN~ 76 (77)
T 2h7z_B 20 NCFKDNRCPPYHRTCYTLYRPDGNGEMKWAVKGCAKTCPTAQP---GESVQCCNTPK--CND 76 (77)
T ss_dssp SCSSCEECCTTCCEEEEEEEECSSSCEEEEEEEEESSCCCCCT---TCEEEEECSTT--TTC
T ss_pred CCccCcCcCCCcCEEeEEEEecCCCCceeEeCCcCCcCcCCCC---CceeEecCCCC--CCC
Confidence 35556789999986632211 1222 35799 987654 23678999884 874
No 68
>1p1p_A AA-conotoxin PIVA; neurotoxin, acetylcholine receptor binding, transcription regulation; HET: HYP; NMR {Conus purpurascens} SCOP: j.30.1.3
Probab=25.61 E-value=42 Score=19.26 Aligned_cols=10 Identities=50% Similarity=1.627 Sum_probs=7.4
Q ss_pred cccC-CCCcee
Q 012960 386 KCCG-FSSAVC 395 (452)
Q Consensus 386 ~cc~-~~~~~c 395 (452)
|||. ||+|.|
T Consensus 1 gccg~ypnaac 11 (26)
T 1p1p_A 1 GCCGSYPNAAC 11 (26)
T ss_dssp CCSTTSCCSSC
T ss_pred CccccCCCccc
Confidence 4665 799988
No 69
>1vyc_A Bucain, neurotoxin; snake neurotoxin; NMR {Bungarus candidus} SCOP: g.7.1.1 PDB: 2h8u_A
Probab=25.26 E-value=60 Score=23.35 Aligned_cols=47 Identities=19% Similarity=0.441 Sum_probs=31.2
Q ss_pred CCCceeeCCCCc-cccc--cCC-CCccccccc---cCCCCceecCCCCcccCCCCCccc
Q 012960 360 CSLLTYCAAGET-CCCG--SSI-LGICLSWKC---CGFSSAVCCSDHRYCCPSNYPICD 411 (452)
Q Consensus 360 c~~~~~c~~~~t-cc~~--~~~-~~~~~~~~c---c~~~~~~cc~d~~~ccp~~~~~c~ 411 (452)
|.....||+|++ |=.. +.. .|.=.+.|| ||-++. ...++||..|. ||
T Consensus 11 ~~~~~tC~~g~~~Cyk~~~~~~~~g~~i~rGCa~tCP~~~~---~~~i~CC~TD~--CN 64 (65)
T 1vyc_A 11 NESSKTCPSGQLLCLKKWEIGNPSGKEVKRGCVATCPKPWK---NEIIQCCAKDK--CN 64 (65)
T ss_dssp CCEEEECCTTCCEEEEEECCSSSSCCCEEEEEESSCCCCCS---CCCEEEESSSS--CC
T ss_pred CccceEcCCCcCEEEeeEEEecCCCCEEECCccCcCcCCCC---CceeEecCCCC--CC
Confidence 445678999887 5443 222 234567899 997665 24778999884 76
No 70
>2h5f_A Denmotoxin; three-finger toxin, neurotoxin, snake venom; 1.90A {Boiga dendrophila} SCOP: g.7.1.1
Probab=24.04 E-value=31 Score=25.90 Aligned_cols=49 Identities=20% Similarity=0.434 Sum_probs=31.1
Q ss_pred cCCCceeeCCCCccccccCC-C---C-ccccccc---cCCCCceecCCCCcccCCCCCcccC
Q 012960 359 RCSLLTYCAAGETCCCGSSI-L---G-ICLSWKC---CGFSSAVCCSDHRYCCPSNYPICDS 412 (452)
Q Consensus 359 ~c~~~~~c~~~~tcc~~~~~-~---~-~~~~~~c---c~~~~~~cc~d~~~ccp~~~~~c~~ 412 (452)
.|.....||+|++=|-.... . | .=.+.|| ||-.+. ...++||-.|. ||.
T Consensus 20 ~c~~~~tCp~g~~~Cyk~~~~~~~~g~~~i~rGCa~tCp~~~~---~~~v~CC~TD~--CN~ 76 (77)
T 2h5f_A 20 NCSIGHRCLPYHMTCYTLYKPDENGEMKWAVKGCARMCPTAKS---GERVKCCTGAS--CNS 76 (77)
T ss_dssp CTTSEEEEEETCCEEEEEEECCSSSCCEEEEEEEESSCCCCCT---TCEEEEECSTT--TTC
T ss_pred CCccccEeCCCcCEEeeEEEeCCCCCccEEECCccCcCcCCCC---CceeEecCCCC--CCC
Confidence 45567789999986632211 1 1 2246899 987654 23678999884 874
No 71
>1qk7_A Selenocosmia huwena lectin-I; SHL-I, cystine knot; NMR {Selenocosmia huwena} SCOP: g.3.6.2
Probab=21.17 E-value=42 Score=20.85 Aligned_cols=20 Identities=25% Similarity=0.855 Sum_probs=12.8
Q ss_pred CCCCcccCCCCCcccCCcCcee
Q 012960 397 SDHRYCCPSNYPICDSVRHQCL 418 (452)
Q Consensus 397 ~d~~~ccp~~~~~c~~~~~~c~ 418 (452)
.++..||| +| +|+....-|.
T Consensus 8 ~~~~~CC~-~~-~Cs~~~kWC~ 27 (32)
T 1qk7_A 8 DYNNGCCS-GY-VCSRTWKWCV 27 (32)
T ss_dssp SSSCCCCT-TE-EECSSSCBEE
T ss_pred CCCCCcCC-Cc-eeCCCCCeee
Confidence 44566774 55 7877776664
No 72
>1lsi_A LSIII; venom, multigene family, neurotoxin; NMR {Laticauda semifasciata} SCOP: g.7.1.1
Probab=20.80 E-value=43 Score=24.21 Aligned_cols=45 Identities=22% Similarity=0.637 Sum_probs=27.2
Q ss_pred ceeeCCCCc-cccc-cCC-----CCccccccc---cCCCCceecCCCCcccCCCCCcccC
Q 012960 363 LTYCAAGET-CCCG-SSI-----LGICLSWKC---CGFSSAVCCSDHRYCCPSNYPICDS 412 (452)
Q Consensus 363 ~~~c~~~~t-cc~~-~~~-----~~~~~~~~c---c~~~~~~cc~d~~~ccp~~~~~c~~ 412 (452)
...||+|++ |=.. +.. .|+=.+.|| ||-.+. ...++||..|. ||.
T Consensus 10 ~~tC~~g~~~Cyk~~~~~~~~~~rg~~i~rGCa~tCP~~~~---~~~i~CC~TD~--CN~ 64 (66)
T 1lsi_A 10 TQTCPSGQEICYVKSWCNAWCSSRGKVLEFGCAATCPSVNT---GTEIKCCSADK--CNT 64 (66)
T ss_dssp CCCCCSSCCEEEEEECCCTTCTTSCCCCEEEEESSCCCCCS---SCEEEEESSTT--TTS
T ss_pred ccCCCCCcCEEEEEEEECccccccCcEEeCCccCcCcCCCC---CceeEecCCcc--CCC
Confidence 346887776 4322 111 133466899 997654 23678999884 874
No 73
>1ziv_A Calpain 9; cysteine protease, papain, calcium-dependent, thiol protease, structural genomics consortium, SGC, hydrolase; 2.31A {Homo sapiens} SCOP: d.3.1.3 PDB: 2p0r_A*
Probab=20.17 E-value=1.1e+02 Score=29.68 Aligned_cols=28 Identities=29% Similarity=0.571 Sum_probs=22.3
Q ss_pred CCCceEEEEEEeec----CCeeEEEEEcCCCC
Q 012960 285 SLDHAVLIVGYDSE----NGVDYWIIKNSWGR 312 (452)
Q Consensus 285 ~~~HaV~IVGyg~~----~g~~yWivkNSWG~ 312 (452)
..+||-.|++.... ++...-.|||-||.
T Consensus 243 v~~HaYsVl~v~~v~~~~~~~~Lv~LrNPWg~ 274 (339)
T 1ziv_A 243 IKGHAYSVTGIDQVSFRGQRIELIRIRNPWGQ 274 (339)
T ss_dssp BTTCCEEEEEEEEEEETTEEEEEEEEECCSSC
T ss_pred ccCeeEEEeEEEEEecCCCceEEEEecCCCCC
Confidence 35899999998753 34578889999996
Done!