Query 012961
Match_columns 452
No_of_seqs 645 out of 3281
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 19:35:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012961.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012961hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vl5_A Unknown conserved prote 99.6 2E-15 6.9E-20 144.9 14.2 135 215-352 37-191 (260)
2 3hnr_A Probable methyltransfer 99.6 2.1E-15 7.3E-20 140.7 13.8 136 215-355 45-205 (220)
3 2p7i_A Hypothetical protein; p 99.6 1.1E-15 3.7E-20 144.3 11.4 129 217-350 44-198 (250)
4 3hem_A Cyclopropane-fatty-acyl 99.6 1.8E-16 6.2E-21 156.1 6.2 185 215-406 72-297 (302)
5 3ujc_A Phosphoethanolamine N-m 99.6 3E-15 1E-19 143.2 14.2 138 215-355 55-210 (266)
6 3bus_A REBM, methyltransferase 99.6 3.8E-15 1.3E-19 143.7 15.0 155 189-353 43-218 (273)
7 4hg2_A Methyltransferase type 99.6 1E-15 3.5E-20 148.5 10.8 98 217-320 41-138 (257)
8 1kpg_A CFA synthase;, cyclopro 99.6 9E-17 3.1E-21 156.6 3.2 177 215-402 64-278 (287)
9 1xtp_A LMAJ004091AAA; SGPP, st 99.6 3.7E-16 1.3E-20 148.9 7.4 130 215-350 93-237 (254)
10 3l8d_A Methyltransferase; stru 99.6 3.6E-15 1.2E-19 141.0 13.6 131 216-350 54-199 (242)
11 2o57_A Putative sarcosine dime 99.6 3.3E-15 1.1E-19 146.3 13.4 153 190-352 61-235 (297)
12 3dlc_A Putative S-adenosyl-L-m 99.6 3E-15 1E-19 138.6 12.2 149 190-349 27-201 (219)
13 3h2b_A SAM-dependent methyltra 99.6 9.6E-16 3.3E-20 141.4 8.4 131 217-351 43-182 (203)
14 1nkv_A Hypothetical protein YJ 99.6 3E-15 1E-19 142.9 11.7 150 189-349 18-185 (256)
15 3dh0_A SAM dependent methyltra 99.6 1.6E-14 5.6E-19 134.5 15.4 135 215-350 37-180 (219)
16 3g5l_A Putative S-adenosylmeth 99.6 3.2E-15 1.1E-19 142.8 10.5 133 215-350 44-215 (253)
17 3kkz_A Uncharacterized protein 99.6 1.5E-14 5E-19 139.6 15.2 134 215-351 46-196 (267)
18 3dli_A Methyltransferase; PSI- 99.6 2.4E-15 8.1E-20 142.9 9.3 129 215-350 41-183 (240)
19 3f4k_A Putative methyltransfer 99.6 1.7E-14 5.9E-19 137.7 15.2 133 215-350 46-195 (257)
20 1xxl_A YCGJ protein; structura 99.6 4.3E-14 1.5E-18 134.3 17.8 134 215-351 21-174 (239)
21 2ex4_A Adrenal gland protein A 99.6 6.9E-15 2.4E-19 139.7 10.5 134 215-351 79-225 (241)
22 3ou2_A SAM-dependent methyltra 99.6 1.3E-14 4.5E-19 134.6 11.9 130 216-350 47-204 (218)
23 3ege_A Putative methyltransfer 99.6 1.1E-14 3.9E-19 140.3 11.2 145 193-352 20-179 (261)
24 3vc1_A Geranyl diphosphate 2-C 99.6 2.6E-14 8.7E-19 141.5 13.9 135 215-352 117-270 (312)
25 3mgg_A Methyltransferase; NYSG 99.6 2.5E-14 8.6E-19 138.3 13.5 136 215-352 37-199 (276)
26 3sm3_A SAM-dependent methyltra 99.6 4.2E-14 1.4E-18 132.5 14.6 132 216-351 31-207 (235)
27 3dtn_A Putative methyltransfer 99.6 5.3E-15 1.8E-19 139.5 8.4 133 215-350 44-213 (234)
28 3ccf_A Cyclopropane-fatty-acyl 99.5 3.4E-14 1.1E-18 138.1 13.6 133 215-352 57-211 (279)
29 1pjz_A Thiopurine S-methyltran 99.5 8E-15 2.7E-19 136.5 8.7 129 215-350 22-175 (203)
30 3bkw_A MLL3908 protein, S-aden 99.5 2.5E-14 8.6E-19 135.1 12.1 132 215-350 43-213 (243)
31 3pfg_A N-methyltransferase; N, 99.5 3E-14 1E-18 137.0 12.8 98 216-317 51-151 (263)
32 4gek_A TRNA (CMO5U34)-methyltr 99.5 3.2E-14 1.1E-18 138.1 13.1 101 215-318 70-179 (261)
33 3e23_A Uncharacterized protein 99.5 8.3E-15 2.8E-19 136.1 8.4 130 216-351 44-182 (211)
34 4htf_A S-adenosylmethionine-de 99.5 2.2E-14 7.4E-19 139.7 11.7 131 216-352 69-233 (285)
35 2p35_A Trans-aconitate 2-methy 99.5 1.5E-14 5.2E-19 138.1 10.3 132 215-349 33-188 (259)
36 4fsd_A Arsenic methyltransfera 99.5 2.3E-14 8E-19 146.3 11.4 135 215-350 83-250 (383)
37 3gu3_A Methyltransferase; alph 99.5 7.2E-14 2.5E-18 136.4 14.1 133 215-350 22-189 (284)
38 2yqz_A Hypothetical protein TT 99.5 4E-14 1.4E-18 135.3 12.0 130 215-349 39-194 (263)
39 3g2m_A PCZA361.24; SAM-depende 99.5 3.4E-14 1.2E-18 139.5 11.2 100 218-319 85-192 (299)
40 1vlm_A SAM-dependent methyltra 99.5 6E-14 2.1E-18 131.4 12.4 126 216-351 48-188 (219)
41 3cgg_A SAM-dependent methyltra 99.5 1.1E-13 3.8E-18 125.4 12.8 127 215-350 46-174 (195)
42 3lcc_A Putative methyl chlorid 99.5 3.1E-14 1.1E-18 134.5 9.4 130 217-351 68-207 (235)
43 3i9f_A Putative type 11 methyl 99.5 4.2E-14 1.4E-18 126.7 9.4 128 215-351 17-148 (170)
44 2fk8_A Methoxy mycolic acid sy 99.5 2.8E-15 9.5E-20 148.5 1.8 182 215-407 90-309 (318)
45 3jwg_A HEN1, methyltransferase 99.5 1.3E-13 4.4E-18 128.7 12.9 113 191-317 13-141 (219)
46 3e8s_A Putative SAM dependent 99.5 4.2E-14 1.4E-18 131.6 9.3 129 216-350 53-208 (227)
47 3bxo_A N,N-dimethyltransferase 99.5 9.3E-14 3.2E-18 130.8 11.7 99 216-318 41-142 (239)
48 1ve3_A Hypothetical protein PH 99.5 1.3E-13 4.5E-18 128.7 12.4 103 216-319 39-144 (227)
49 4e2x_A TCAB9; kijanose, tetron 99.5 5.3E-15 1.8E-19 152.2 3.1 132 215-350 107-252 (416)
50 1y8c_A S-adenosylmethionine-de 99.5 9.9E-14 3.4E-18 130.9 11.5 119 192-318 20-143 (246)
51 3ocj_A Putative exported prote 99.5 1E-13 3.5E-18 136.7 12.0 134 215-350 118-290 (305)
52 3jwh_A HEN1; methyltransferase 99.5 3E-13 1E-17 126.2 13.7 98 215-318 29-142 (217)
53 2kw5_A SLR1183 protein; struct 99.5 1.2E-13 4.2E-18 127.1 10.7 130 218-352 32-172 (202)
54 2aot_A HMT, histamine N-methyl 99.5 4.6E-14 1.6E-18 138.3 8.2 134 215-349 52-219 (292)
55 3cc8_A Putative methyltransfer 99.5 2.3E-13 8E-18 126.8 11.3 133 215-353 32-187 (230)
56 2gs9_A Hypothetical protein TT 99.5 1.2E-13 4.1E-18 128.0 8.7 99 215-320 36-135 (211)
57 2gb4_A Thiopurine S-methyltran 99.4 1.7E-13 6E-18 132.3 10.1 129 215-350 68-226 (252)
58 2xvm_A Tellurite resistance pr 99.4 4.6E-13 1.6E-17 122.3 12.3 132 216-352 33-174 (199)
59 3mti_A RRNA methylase; SAM-dep 99.4 5.4E-13 1.8E-17 121.2 12.3 134 215-349 22-167 (185)
60 3d2l_A SAM-dependent methyltra 99.4 3.9E-13 1.3E-17 126.9 11.7 100 217-318 35-138 (243)
61 3ofk_A Nodulation protein S; N 99.4 3.6E-13 1.2E-17 125.3 10.6 100 215-319 51-156 (216)
62 3orh_A Guanidinoacetate N-meth 99.4 8.7E-14 3E-18 132.7 6.5 146 193-348 47-207 (236)
63 2avn_A Ubiquinone/menaquinone 99.4 3.8E-13 1.3E-17 129.4 10.7 101 216-320 55-155 (260)
64 2zfu_A Nucleomethylin, cerebra 99.4 3.3E-13 1.1E-17 125.6 9.6 110 216-349 68-177 (215)
65 1ri5_A MRNA capping enzyme; me 99.4 3.1E-13 1.1E-17 131.4 9.8 139 215-355 64-254 (298)
66 2vdw_A Vaccinia virus capping 99.4 1.4E-13 4.6E-18 136.5 7.2 138 216-355 49-250 (302)
67 3g5t_A Trans-aconitate 3-methy 99.4 4.9E-13 1.7E-17 131.2 10.4 98 215-315 36-147 (299)
68 3thr_A Glycine N-methyltransfe 99.4 2E-13 7E-18 133.0 7.3 119 193-319 43-177 (293)
69 2a14_A Indolethylamine N-methy 99.4 1.3E-13 4.6E-18 133.2 6.0 135 215-351 55-238 (263)
70 3bkx_A SAM-dependent methyltra 99.4 1.6E-12 5.3E-17 125.4 13.1 135 215-351 43-219 (275)
71 1yzh_A TRNA (guanine-N(7)-)-me 99.4 3.2E-12 1.1E-16 119.3 14.5 125 216-350 42-181 (214)
72 2g72_A Phenylethanolamine N-me 99.4 1.6E-13 5.5E-18 134.0 5.7 136 215-351 71-256 (289)
73 3m33_A Uncharacterized protein 99.4 8.8E-13 3E-17 124.3 10.2 119 216-353 49-169 (226)
74 3lpm_A Putative methyltransfer 99.4 1.9E-12 6.5E-17 124.7 12.7 166 215-390 49-246 (259)
75 1zx0_A Guanidinoacetate N-meth 99.4 5E-13 1.7E-17 126.7 8.5 140 192-345 46-204 (236)
76 3g07_A 7SK snRNA methylphospha 99.4 1.2E-12 4.2E-17 128.5 11.5 129 215-349 46-267 (292)
77 3dmg_A Probable ribosomal RNA 99.4 8.1E-13 2.8E-17 135.1 10.1 132 215-349 233-371 (381)
78 2pxx_A Uncharacterized protein 99.4 1.2E-12 4.2E-17 120.7 10.4 99 216-320 43-162 (215)
79 2i62_A Nicotinamide N-methyltr 99.4 3.4E-13 1.2E-17 128.9 6.4 131 215-351 56-239 (265)
80 3e05_A Precorrin-6Y C5,15-meth 99.4 2.1E-11 7.3E-16 112.6 18.3 118 215-344 40-161 (204)
81 3grz_A L11 mtase, ribosomal pr 99.4 1.9E-12 6.4E-17 119.7 11.0 120 216-350 61-184 (205)
82 2p8j_A S-adenosylmethionine-de 99.4 1.2E-12 4.2E-17 120.7 9.4 101 216-318 24-129 (209)
83 1p91_A Ribosomal RNA large sub 99.4 3.5E-13 1.2E-17 129.9 5.9 97 215-320 85-181 (269)
84 3bgv_A MRNA CAP guanine-N7 met 99.4 2.7E-12 9.3E-17 126.8 11.6 140 215-355 34-236 (313)
85 2fca_A TRNA (guanine-N(7)-)-me 99.3 3.9E-12 1.3E-16 119.2 11.9 124 216-349 39-177 (213)
86 3m70_A Tellurite resistance pr 99.3 2.4E-12 8.1E-17 125.3 10.5 133 216-353 121-262 (286)
87 1dus_A MJ0882; hypothetical pr 99.3 9.3E-12 3.2E-16 112.6 12.7 135 175-320 19-160 (194)
88 3njr_A Precorrin-6Y methylase; 99.3 2.6E-11 8.8E-16 112.9 15.9 121 215-350 55-179 (204)
89 3evz_A Methyltransferase; NYSG 99.3 9.7E-12 3.3E-16 116.8 13.1 126 215-349 55-204 (230)
90 3eey_A Putative rRNA methylase 99.3 5.5E-12 1.9E-16 115.6 10.8 133 216-349 23-171 (197)
91 3mq2_A 16S rRNA methyltransfer 99.3 4E-12 1.4E-16 118.6 9.9 134 215-350 27-183 (218)
92 2yxd_A Probable cobalt-precorr 99.3 2.9E-11 1E-15 108.4 15.0 139 192-355 20-161 (183)
93 1xdz_A Methyltransferase GIDB; 99.3 4.9E-12 1.7E-16 120.3 10.4 123 216-350 71-201 (240)
94 3p2e_A 16S rRNA methylase; met 99.3 2E-12 7E-17 122.5 7.7 163 215-378 24-212 (225)
95 1nt2_A Fibrillarin-like PRE-rR 99.3 9.6E-12 3.3E-16 116.6 11.6 128 215-351 57-195 (210)
96 1wzn_A SAM-dependent methyltra 99.3 1.1E-11 3.8E-16 117.9 11.8 103 215-319 41-147 (252)
97 3gwz_A MMCR; methyltransferase 99.3 3.8E-11 1.3E-15 121.8 16.3 131 215-350 202-355 (369)
98 3p9n_A Possible methyltransfer 99.3 9.5E-12 3.2E-16 113.7 10.4 125 188-319 22-155 (189)
99 3hm2_A Precorrin-6Y C5,15-meth 99.3 2.6E-11 8.9E-16 108.7 13.0 120 215-349 25-151 (178)
100 4df3_A Fibrillarin-like rRNA/T 99.3 7.2E-12 2.5E-16 119.6 9.5 131 215-350 77-216 (233)
101 2r3s_A Uncharacterized protein 99.3 1.8E-11 6E-16 121.7 12.7 128 215-350 165-322 (335)
102 3q87_B N6 adenine specific DNA 99.3 1E-11 3.6E-16 112.1 9.9 117 216-351 24-149 (170)
103 2ld4_A Anamorsin; methyltransf 99.3 8.6E-12 2.9E-16 112.5 9.3 113 215-346 12-130 (176)
104 2frn_A Hypothetical protein PH 99.3 3.9E-11 1.3E-15 117.1 14.6 156 174-348 94-254 (278)
105 3i53_A O-methyltransferase; CO 99.3 3.5E-11 1.2E-15 119.9 14.6 131 215-350 169-320 (332)
106 3dp7_A SAM-dependent methyltra 99.3 1.5E-11 5.1E-16 124.5 10.9 127 215-349 179-340 (363)
107 3htx_A HEN1; HEN1, small RNA m 99.3 3.9E-11 1.3E-15 131.3 14.5 120 190-319 704-836 (950)
108 2ip2_A Probable phenazine-spec 99.3 1.3E-10 4.3E-15 115.7 17.2 130 217-350 169-321 (334)
109 1qzz_A RDMB, aclacinomycin-10- 99.3 5.1E-11 1.7E-15 120.4 14.4 131 215-350 182-338 (374)
110 2ipx_A RRNA 2'-O-methyltransfe 99.2 1.2E-11 4.2E-16 116.8 8.7 129 216-349 78-215 (233)
111 1x19_A CRTF-related protein; m 99.2 5.4E-11 1.9E-15 119.9 14.0 131 215-350 190-347 (359)
112 1l3i_A Precorrin-6Y methyltran 99.2 7E-11 2.4E-15 106.6 13.3 134 192-347 18-156 (192)
113 1fbn_A MJ fibrillarin homologu 99.2 3E-11 1E-15 114.1 11.1 126 215-350 74-212 (230)
114 2pwy_A TRNA (adenine-N(1)-)-me 99.2 5.4E-11 1.9E-15 113.3 13.0 122 215-350 96-223 (258)
115 2nxc_A L11 mtase, ribosomal pr 99.2 3.5E-11 1.2E-15 115.9 11.6 121 216-350 121-243 (254)
116 3id6_C Fibrillarin-like rRNA/T 99.2 5.1E-11 1.7E-15 113.7 12.5 128 215-350 76-215 (232)
117 4dcm_A Ribosomal RNA large sub 99.2 8.3E-12 2.8E-16 127.3 7.5 119 191-320 206-337 (375)
118 3dxy_A TRNA (guanine-N(7)-)-me 99.2 8.9E-12 3.1E-16 117.5 6.9 121 216-346 35-172 (218)
119 3ggd_A SAM-dependent methyltra 99.2 7.7E-12 2.6E-16 118.6 6.4 99 215-319 56-165 (245)
120 3lst_A CALO1 methyltransferase 99.2 2.9E-11 1E-15 121.5 10.9 126 215-350 184-335 (348)
121 3hp7_A Hemolysin, putative; st 99.2 1.1E-10 3.8E-15 114.8 14.7 126 215-349 85-230 (291)
122 2b3t_A Protein methyltransfera 99.2 1.4E-10 4.8E-15 112.6 14.4 138 191-348 94-260 (276)
123 3fpf_A Mtnas, putative unchara 99.2 6.8E-11 2.3E-15 116.5 11.9 98 214-318 121-223 (298)
124 3ckk_A TRNA (guanine-N(7)-)-me 99.2 4.7E-11 1.6E-15 113.9 10.5 121 216-345 47-189 (235)
125 3g89_A Ribosomal RNA small sub 99.2 4.3E-11 1.5E-15 115.1 10.3 124 215-350 80-211 (249)
126 2ozv_A Hypothetical protein AT 99.2 4.5E-11 1.5E-15 115.5 10.3 123 216-349 37-192 (260)
127 1tw3_A COMT, carminomycin 4-O- 99.2 1.8E-10 6.2E-15 115.8 15.1 132 215-351 183-339 (360)
128 3iv6_A Putative Zn-dependent a 99.2 4E-11 1.4E-15 116.4 9.8 99 215-319 45-150 (261)
129 3mcz_A O-methyltransferase; ad 99.2 8.5E-11 2.9E-15 117.9 12.5 130 216-348 180-336 (352)
130 2pjd_A Ribosomal RNA small sub 99.2 8.1E-12 2.8E-16 125.5 4.9 117 192-320 181-306 (343)
131 1yb2_A Hypothetical protein TA 99.2 3.8E-11 1.3E-15 116.6 9.4 120 215-350 110-236 (275)
132 3opn_A Putative hemolysin; str 99.2 7E-12 2.4E-16 119.5 4.0 125 215-350 37-183 (232)
133 3lbf_A Protein-L-isoaspartate 99.2 6.8E-11 2.3E-15 109.4 10.5 110 194-319 64-176 (210)
134 3reo_A (ISO)eugenol O-methyltr 99.2 1.5E-10 5.1E-15 117.5 13.3 130 215-351 203-355 (368)
135 3q7e_A Protein arginine N-meth 99.2 6.1E-11 2.1E-15 119.6 10.0 98 216-315 67-171 (349)
136 1ej0_A FTSJ; methyltransferase 99.2 8.5E-11 2.9E-15 104.2 9.8 112 215-347 22-157 (180)
137 2fyt_A Protein arginine N-meth 99.2 9.5E-11 3.2E-15 117.8 11.1 98 215-314 64-168 (340)
138 1jsx_A Glucose-inhibited divis 99.2 8.3E-11 2.8E-15 108.4 9.8 116 216-349 66-186 (207)
139 1fp1_D Isoliquiritigenin 2'-O- 99.2 5.2E-11 1.8E-15 120.8 8.9 129 215-350 209-359 (372)
140 3mb5_A SAM-dependent methyltra 99.1 1.3E-10 4.6E-15 110.8 10.9 119 215-349 93-220 (255)
141 4dzr_A Protein-(glutamine-N5) 99.1 7.4E-12 2.5E-16 115.3 2.0 139 192-349 14-190 (215)
142 2qe6_A Uncharacterized protein 99.1 2E-10 7E-15 111.9 12.0 101 216-319 78-198 (274)
143 1fp2_A Isoflavone O-methyltran 99.1 7.2E-11 2.5E-15 118.7 8.6 128 216-350 189-340 (352)
144 3bwc_A Spermidine synthase; SA 99.1 8.8E-11 3E-15 116.2 9.0 125 215-349 95-238 (304)
145 3fzg_A 16S rRNA methylase; met 99.1 9E-11 3.1E-15 108.3 8.3 145 192-349 36-186 (200)
146 3uwp_A Histone-lysine N-methyl 99.1 5.3E-11 1.8E-15 121.9 7.3 122 187-318 153-289 (438)
147 3p9c_A Caffeic acid O-methyltr 99.1 4E-10 1.4E-14 114.2 13.8 126 215-351 201-353 (364)
148 1af7_A Chemotaxis receptor met 99.1 1.1E-10 3.7E-15 114.1 9.1 101 216-317 106-252 (274)
149 2ift_A Putative methylase HI07 99.1 6.8E-11 2.3E-15 109.6 6.9 101 217-320 55-166 (201)
150 1i9g_A Hypothetical protein RV 99.1 2.9E-10 1E-14 109.9 11.5 119 215-347 99-226 (280)
151 2fhp_A Methylase, putative; al 99.1 1.7E-10 5.9E-15 104.1 8.5 132 178-320 15-157 (187)
152 1g8a_A Fibrillarin-like PRE-rR 99.1 6.5E-10 2.2E-14 104.2 12.6 129 215-350 73-211 (227)
153 3bzb_A Uncharacterized protein 99.1 6.8E-10 2.3E-14 108.4 12.7 130 216-349 80-235 (281)
154 3r0q_C Probable protein argini 99.1 3.5E-10 1.2E-14 115.2 11.1 99 215-317 63-169 (376)
155 1vbf_A 231AA long hypothetical 99.1 2.5E-10 8.5E-15 107.1 8.7 107 194-320 57-168 (231)
156 2fpo_A Methylase YHHF; structu 99.1 2.8E-10 9.6E-15 105.5 8.7 122 188-319 34-162 (202)
157 1ws6_A Methyltransferase; stru 99.1 1E-10 3.5E-15 103.9 5.1 123 188-320 20-150 (171)
158 1o54_A SAM-dependent O-methylt 99.0 8.6E-10 2.9E-14 107.0 12.0 120 215-350 112-238 (277)
159 1dl5_A Protein-L-isoaspartate 99.0 5.7E-10 2E-14 110.7 10.9 110 194-319 62-177 (317)
160 3tma_A Methyltransferase; thum 99.0 1.1E-09 3.7E-14 110.3 12.8 122 215-349 203-337 (354)
161 1g6q_1 HnRNP arginine N-methyl 99.0 5.6E-10 1.9E-14 111.5 10.3 98 216-315 39-143 (328)
162 2yxe_A Protein-L-isoaspartate 99.0 9.4E-10 3.2E-14 102.0 11.1 99 215-320 77-180 (215)
163 3tfw_A Putative O-methyltransf 99.0 2.7E-09 9.3E-14 102.1 14.4 98 216-318 64-171 (248)
164 2esr_A Methyltransferase; stru 99.0 1.7E-10 6E-15 103.7 5.7 120 191-320 14-141 (177)
165 1ixk_A Methyltransferase; open 99.0 1E-09 3.6E-14 109.0 11.9 126 215-346 118-270 (315)
166 3sso_A Methyltransferase; macr 99.0 1.2E-10 4.2E-15 118.8 5.1 93 215-318 216-325 (419)
167 2vdv_E TRNA (guanine-N(7)-)-me 99.0 1.1E-09 3.8E-14 104.4 11.4 119 216-343 50-191 (246)
168 3gdh_A Trimethylguanosine synt 99.0 1.5E-11 5.2E-16 116.4 -1.8 98 216-316 79-180 (241)
169 2igt_A SAM dependent methyltra 99.0 1.5E-09 5.1E-14 108.8 12.5 128 216-346 154-299 (332)
170 1u2z_A Histone-lysine N-methyl 99.0 7.2E-10 2.5E-14 114.8 10.4 102 215-318 242-360 (433)
171 4a6d_A Hydroxyindole O-methylt 99.0 1.6E-09 5.5E-14 109.2 12.5 129 215-350 179-333 (353)
172 1zg3_A Isoflavanone 4'-O-methy 99.0 3.8E-10 1.3E-14 113.7 7.8 128 216-350 194-346 (358)
173 2yvl_A TRMI protein, hypotheti 99.0 1.8E-09 6E-14 102.2 11.9 119 215-349 91-213 (248)
174 3a27_A TYW2, uncharacterized p 99.0 2.3E-09 8E-14 104.2 12.9 98 215-319 119-221 (272)
175 2plw_A Ribosomal RNA methyltra 99.0 8.3E-10 2.8E-14 101.2 9.1 91 216-318 23-155 (201)
176 2y1w_A Histone-arginine methyl 99.0 1E-09 3.5E-14 110.5 10.3 100 215-317 50-155 (348)
177 1jg1_A PIMT;, protein-L-isoasp 99.0 1.3E-09 4.5E-14 103.0 10.4 111 193-320 77-192 (235)
178 3adn_A Spermidine synthase; am 99.0 1.3E-09 4.5E-14 107.4 10.6 106 215-321 83-202 (294)
179 2bm8_A Cephalosporin hydroxyla 99.0 3.1E-10 1.1E-14 108.1 5.4 116 217-345 83-213 (236)
180 3u81_A Catechol O-methyltransf 99.0 6.9E-10 2.4E-14 103.9 7.6 100 216-318 59-171 (221)
181 3dr5_A Putative O-methyltransf 99.0 9.9E-10 3.4E-14 103.7 8.6 97 216-317 57-163 (221)
182 3lec_A NADB-rossmann superfami 99.0 3.9E-09 1.3E-13 100.3 12.7 120 216-349 22-147 (230)
183 1xj5_A Spermidine synthase 1; 99.0 1.3E-09 4.5E-14 109.3 9.2 106 215-321 120-239 (334)
184 2h00_A Methyltransferase 10 do 99.0 4.3E-10 1.5E-14 107.4 5.3 135 215-350 65-237 (254)
185 3ntv_A MW1564 protein; rossman 99.0 7.9E-10 2.7E-14 104.6 7.1 98 216-318 72-177 (232)
186 3gnl_A Uncharacterized protein 98.9 3.6E-09 1.2E-13 101.4 11.6 120 216-349 22-147 (244)
187 3tm4_A TRNA (guanine N2-)-meth 98.9 7.6E-09 2.6E-13 105.2 14.3 122 215-350 217-351 (373)
188 1i1n_A Protein-L-isoaspartate 98.9 2.3E-09 7.8E-14 100.3 9.7 98 215-319 77-184 (226)
189 1o9g_A RRNA methyltransferase; 98.9 1.1E-09 3.7E-14 104.6 7.0 104 215-318 51-215 (250)
190 3k6r_A Putative transferase PH 98.9 8.9E-09 3E-13 100.7 13.4 158 173-349 93-255 (278)
191 1r18_A Protein-L-isoaspartate( 98.9 3.6E-09 1.2E-13 99.3 10.2 96 216-319 85-196 (227)
192 2pbf_A Protein-L-isoaspartate 98.9 8.7E-10 3E-14 103.2 5.4 97 216-319 81-195 (227)
193 3c3p_A Methyltransferase; NP_9 98.9 1.3E-09 4.6E-14 100.9 6.6 95 217-317 58-160 (210)
194 1ne2_A Hypothetical protein TA 98.9 7.7E-09 2.6E-13 94.9 11.7 116 215-349 51-168 (200)
195 3kr9_A SAM-dependent methyltra 98.9 8.6E-09 2.9E-13 97.7 12.2 118 217-349 17-141 (225)
196 3giw_A Protein of unknown func 98.9 2.2E-09 7.4E-14 104.7 8.0 104 215-319 78-202 (277)
197 2qm3_A Predicted methyltransfe 98.9 1.9E-08 6.3E-13 102.2 15.3 129 216-352 173-310 (373)
198 3duw_A OMT, O-methyltransferas 98.9 2.1E-09 7.3E-14 100.3 7.7 99 216-319 59-169 (223)
199 4azs_A Methyltransferase WBDD; 98.9 4.3E-10 1.5E-14 120.6 3.1 101 215-317 66-173 (569)
200 2yxl_A PH0851 protein, 450AA l 98.9 9.5E-09 3.2E-13 107.0 13.0 126 215-346 259-414 (450)
201 2nyu_A Putative ribosomal RNA 98.9 3.8E-09 1.3E-13 96.2 8.8 92 216-318 23-146 (196)
202 2b25_A Hypothetical protein; s 98.9 4.3E-09 1.5E-13 105.0 9.9 99 215-319 105-221 (336)
203 3tr6_A O-methyltransferase; ce 98.9 1.4E-09 4.9E-14 101.5 5.0 97 217-318 66-175 (225)
204 2wa2_A Non-structural protein 98.8 1.5E-09 5.2E-14 106.0 5.1 95 215-319 82-195 (276)
205 3ajd_A Putative methyltransfer 98.8 5.3E-09 1.8E-13 101.6 8.9 126 215-346 83-236 (274)
206 3b3j_A Histone-arginine methyl 98.8 4.7E-09 1.6E-13 110.3 9.1 98 215-316 158-262 (480)
207 2oxt_A Nucleoside-2'-O-methylt 98.8 3.6E-09 1.2E-13 102.8 7.5 100 215-319 74-187 (265)
208 3r3h_A O-methyltransferase, SA 98.8 1E-09 3.4E-14 105.0 3.4 98 216-318 61-171 (242)
209 3lcv_B Sisomicin-gentamicin re 98.8 1.4E-08 4.7E-13 97.9 11.2 130 216-349 133-270 (281)
210 1wy7_A Hypothetical protein PH 98.8 4E-08 1.4E-12 90.4 13.8 122 215-351 49-175 (207)
211 3dou_A Ribosomal RNA large sub 98.8 4E-09 1.4E-13 97.2 7.0 114 215-348 25-161 (191)
212 2b2c_A Spermidine synthase; be 98.8 5.1E-09 1.8E-13 104.1 7.6 100 216-321 109-226 (314)
213 2gpy_A O-methyltransferase; st 98.8 3.9E-09 1.3E-13 99.4 6.3 97 216-317 55-160 (233)
214 2b78_A Hypothetical protein SM 98.8 2.1E-08 7.2E-13 102.4 11.9 128 216-347 213-358 (385)
215 1inl_A Spermidine synthase; be 98.8 8E-09 2.7E-13 101.8 8.5 104 216-320 91-208 (296)
216 1iy9_A Spermidine synthase; ro 98.8 8E-09 2.7E-13 100.7 8.3 126 215-346 75-213 (275)
217 2p41_A Type II methyltransfera 98.8 4.7E-09 1.6E-13 104.0 6.6 99 216-319 83-193 (305)
218 4hc4_A Protein arginine N-meth 98.8 9.6E-09 3.3E-13 104.6 8.9 96 216-314 84-186 (376)
219 1uir_A Polyamine aminopropyltr 98.8 3.8E-09 1.3E-13 104.9 5.6 123 215-341 77-216 (314)
220 2pt6_A Spermidine synthase; tr 98.8 7E-09 2.4E-13 103.4 7.4 120 216-341 117-250 (321)
221 1sui_A Caffeoyl-COA O-methyltr 98.8 4.3E-09 1.5E-13 100.9 5.7 97 216-317 80-190 (247)
222 2o07_A Spermidine synthase; st 98.8 5.5E-09 1.9E-13 103.4 6.6 106 215-321 95-213 (304)
223 2i7c_A Spermidine synthase; tr 98.8 7.7E-09 2.6E-13 101.2 7.4 125 215-346 78-216 (283)
224 3cbg_A O-methyltransferase; cy 98.8 8.3E-09 2.8E-13 97.6 7.2 98 216-318 73-183 (232)
225 1sqg_A SUN protein, FMU protei 98.8 3.5E-08 1.2E-12 102.1 12.2 126 215-346 246-399 (429)
226 2yx1_A Hypothetical protein MJ 98.8 5.2E-08 1.8E-12 97.6 12.7 115 216-349 196-315 (336)
227 2hnk_A SAM-dependent O-methylt 98.7 8.2E-09 2.8E-13 97.7 6.3 97 216-317 61-181 (239)
228 3gjy_A Spermidine synthase; AP 98.7 6E-09 2.1E-13 103.6 5.3 101 216-318 90-201 (317)
229 1mjf_A Spermidine synthase; sp 98.7 9.1E-09 3.1E-13 100.5 6.5 97 216-319 76-195 (281)
230 2cmg_A Spermidine synthase; tr 98.7 1.3E-08 4.3E-13 98.7 6.9 93 215-319 72-173 (262)
231 1nv8_A HEMK protein; class I a 98.7 4E-08 1.4E-12 96.2 10.4 117 191-318 107-250 (284)
232 4dmg_A Putative uncharacterize 98.7 7.6E-08 2.6E-12 98.6 12.7 126 216-345 215-351 (393)
233 2frx_A Hypothetical protein YE 98.7 4.6E-08 1.6E-12 102.7 10.8 122 215-342 117-266 (479)
234 2avd_A Catechol-O-methyltransf 98.7 1E-08 3.5E-13 95.9 5.1 98 216-318 70-180 (229)
235 3m6w_A RRNA methylase; rRNA me 98.7 2.5E-08 8.6E-13 104.1 8.6 128 215-348 101-256 (464)
236 3c0k_A UPF0064 protein YCCW; P 98.7 7.2E-08 2.5E-12 98.6 11.6 126 216-345 221-364 (396)
237 3c3y_A Pfomt, O-methyltransfer 98.7 1.9E-08 6.6E-13 95.5 6.7 97 216-317 71-181 (237)
238 3v97_A Ribosomal RNA large sub 98.7 7E-08 2.4E-12 105.9 11.9 120 216-345 540-676 (703)
239 1wxx_A TT1595, hypothetical pr 98.7 2.6E-08 8.9E-13 101.5 7.8 125 217-345 211-350 (382)
240 3frh_A 16S rRNA methylase; met 98.7 5.5E-08 1.9E-12 92.8 9.3 132 215-349 105-240 (253)
241 1uwv_A 23S rRNA (uracil-5-)-me 98.6 5.9E-07 2E-11 93.0 16.7 135 193-350 272-413 (433)
242 2xyq_A Putative 2'-O-methyl tr 98.6 8.4E-08 2.9E-12 94.3 9.7 112 215-349 63-195 (290)
243 3m4x_A NOL1/NOP2/SUN family pr 98.6 5E-08 1.7E-12 101.7 8.3 128 215-348 105-260 (456)
244 1zq9_A Probable dimethyladenos 98.6 8E-08 2.7E-12 94.0 9.4 109 194-314 15-144 (285)
245 2as0_A Hypothetical protein PH 98.6 3.2E-08 1.1E-12 101.1 6.8 126 216-345 218-360 (396)
246 2f8l_A Hypothetical protein LM 98.6 9.8E-08 3.4E-12 95.6 9.7 122 215-343 130-278 (344)
247 2ih2_A Modification methylase 98.6 1.4E-07 4.8E-12 96.4 10.7 130 193-344 25-187 (421)
248 2h1r_A Dimethyladenosine trans 98.6 2.5E-07 8.7E-12 91.1 10.8 87 194-292 29-118 (299)
249 2okc_A Type I restriction enzy 98.4 6.6E-07 2.3E-11 92.9 9.7 117 194-320 158-310 (445)
250 2jjq_A Uncharacterized RNA met 98.4 1.1E-06 3.8E-11 90.8 10.9 95 216-317 291-387 (425)
251 3b5i_A S-adenosyl-L-methionine 98.4 1.1E-06 3.9E-11 89.2 10.6 103 215-318 52-226 (374)
252 1yub_A Ermam, rRNA methyltrans 98.4 4.2E-09 1.4E-13 100.5 -7.1 101 215-318 29-146 (245)
253 3evf_A RNA-directed RNA polyme 98.4 6.6E-07 2.3E-11 86.6 7.9 104 216-321 75-188 (277)
254 1qam_A ERMC' methyltransferase 98.3 1.7E-07 5.9E-12 89.5 3.5 66 215-286 30-101 (244)
255 3gru_A Dimethyladenosine trans 98.3 1.1E-06 3.8E-11 86.5 9.0 84 194-287 37-122 (295)
256 2qfm_A Spermine synthase; sper 98.3 4.2E-07 1.4E-11 91.7 5.7 103 215-319 188-316 (364)
257 3k0b_A Predicted N6-adenine-sp 98.2 9E-06 3.1E-10 83.1 12.0 118 192-319 186-352 (393)
258 3ldu_A Putative methylase; str 98.2 6.3E-06 2.2E-10 84.0 10.4 103 215-319 195-346 (385)
259 2efj_A 3,7-dimethylxanthine me 98.2 2.9E-06 1E-10 86.3 7.8 140 216-356 53-297 (384)
260 3bt7_A TRNA (uracil-5-)-methyl 98.2 3.6E-06 1.2E-10 85.2 8.3 117 217-350 215-350 (369)
261 3ldg_A Putative uncharacterize 98.1 1.9E-05 6.5E-10 80.5 12.9 102 216-319 195-345 (384)
262 2b9e_A NOL1/NOP2/SUN domain fa 98.1 1E-05 3.5E-10 80.1 9.9 125 215-346 102-260 (309)
263 4gqb_A Protein arginine N-meth 98.1 6.3E-06 2.2E-10 88.9 8.6 95 215-314 357-464 (637)
264 3tqs_A Ribosomal RNA small sub 98.1 6.3E-06 2.2E-10 79.4 7.5 79 194-286 16-103 (255)
265 2ar0_A M.ecoki, type I restric 98.0 4.8E-06 1.6E-10 88.6 6.5 116 195-320 157-315 (541)
266 3fut_A Dimethyladenosine trans 98.0 9E-06 3.1E-10 79.0 7.8 82 194-287 34-118 (271)
267 2dul_A N(2),N(2)-dimethylguano 98.0 6.6E-06 2.2E-10 83.7 5.9 96 217-317 49-164 (378)
268 1m6e_X S-adenosyl-L-methionnin 97.9 3.6E-06 1.2E-10 84.9 2.4 103 215-318 51-210 (359)
269 3axs_A Probable N(2),N(2)-dime 97.9 9.3E-06 3.2E-10 83.0 4.8 96 216-317 53-158 (392)
270 2qy6_A UPF0209 protein YFCK; s 97.8 1E-05 3.6E-10 78.0 4.5 123 215-349 60-233 (257)
271 3ftd_A Dimethyladenosine trans 97.8 7.3E-05 2.5E-09 71.6 9.3 75 193-277 17-92 (249)
272 3ua3_A Protein arginine N-meth 97.8 1.8E-05 6.1E-10 85.7 5.4 97 216-314 410-531 (745)
273 3uzu_A Ribosomal RNA small sub 97.8 2.6E-05 8.9E-10 76.1 6.0 72 194-277 29-106 (279)
274 3o4f_A Spermidine synthase; am 97.7 0.00011 3.6E-09 72.2 10.2 104 215-324 83-205 (294)
275 3v97_A Ribosomal RNA large sub 97.7 0.00017 5.7E-09 79.1 12.3 118 192-318 175-348 (703)
276 4auk_A Ribosomal RNA large sub 97.7 0.00026 8.9E-09 71.4 12.2 119 215-345 211-334 (375)
277 3lkd_A Type I restriction-modi 97.6 0.00017 5.8E-09 76.7 10.3 141 195-343 205-381 (542)
278 2r6z_A UPF0341 protein in RSP 97.6 2.2E-05 7.6E-10 75.6 3.1 72 216-287 84-169 (258)
279 3khk_A Type I restriction-modi 97.6 9.8E-05 3.4E-09 78.5 8.4 138 194-343 232-419 (544)
280 3gcz_A Polyprotein; flavivirus 97.6 6.2E-05 2.1E-09 72.9 6.2 102 216-320 91-204 (282)
281 3eld_A Methyltransferase; flav 97.5 0.00028 9.7E-09 68.8 9.7 103 215-320 81-194 (300)
282 3cvo_A Methyltransferase-like 97.4 0.00044 1.5E-08 64.1 9.3 91 216-315 31-152 (202)
283 3ll7_A Putative methyltransfer 97.4 0.00014 4.8E-09 74.6 6.4 105 216-321 94-213 (410)
284 1m6y_A S-adenosyl-methyltransf 97.4 9E-05 3.1E-09 73.0 4.1 68 215-287 26-106 (301)
285 1qyr_A KSGA, high level kasuga 97.4 0.00011 3.8E-09 70.5 4.6 79 194-286 8-97 (252)
286 3s1s_A Restriction endonucleas 97.4 0.00038 1.3E-08 76.5 9.0 107 216-322 322-470 (878)
287 2px2_A Genome polyprotein [con 97.3 0.0025 8.5E-08 60.9 12.4 95 215-319 73-185 (269)
288 2k4m_A TR8_protein, UPF0146 pr 97.0 0.0014 4.9E-08 57.4 6.9 78 217-316 37-120 (153)
289 2oyr_A UPF0341 protein YHIQ; a 96.9 0.00039 1.3E-08 66.9 3.5 93 217-311 90-194 (258)
290 2wk1_A NOVP; transferase, O-me 96.9 0.0033 1.1E-07 61.2 10.0 135 215-358 106-281 (282)
291 3lkz_A Non-structural protein 96.9 0.018 6.1E-07 56.1 14.1 99 217-321 96-208 (321)
292 3c6k_A Spermine synthase; sper 96.8 0.0016 5.5E-08 65.9 6.7 119 216-341 206-350 (381)
293 3ufb_A Type I restriction-modi 96.8 0.0078 2.7E-07 63.7 12.0 118 194-320 204-365 (530)
294 4fzv_A Putative methyltransfer 96.6 0.00066 2.3E-08 68.4 2.3 105 215-320 148-287 (359)
295 3p8z_A Mtase, non-structural p 96.4 0.059 2E-06 50.9 13.7 98 217-321 80-190 (267)
296 2zig_A TTHA0409, putative modi 95.6 0.02 6.9E-07 55.7 7.0 94 262-359 21-140 (297)
297 2vz8_A Fatty acid synthase; tr 95.2 0.0059 2E-07 75.6 2.1 98 216-317 1241-1348(2512)
298 1boo_A Protein (N-4 cytosine-s 94.9 0.038 1.3E-06 54.5 6.6 95 262-360 14-125 (323)
299 3r24_A NSP16, 2'-O-methyl tran 94.9 0.084 2.9E-06 51.4 8.7 130 192-349 90-239 (344)
300 3vyw_A MNMC2; tRNA wobble urid 94.8 0.11 3.7E-06 51.0 9.5 74 263-350 168-247 (308)
301 2zig_A TTHA0409, putative modi 94.5 0.066 2.2E-06 52.0 7.1 51 193-252 222-274 (297)
302 1wg8_A Predicted S-adenosylmet 94.3 0.07 2.4E-06 51.7 6.6 66 216-286 23-96 (285)
303 1g55_A DNA cytosine methyltran 92.3 0.28 9.7E-06 48.6 7.7 126 218-348 4-146 (343)
304 3g7u_A Cytosine-specific methy 91.0 1.4 4.9E-05 44.2 11.4 120 218-345 4-145 (376)
305 1g60_A Adenine-specific methyl 89.0 0.63 2.2E-05 44.0 6.5 50 297-359 54-103 (260)
306 3pvc_A TRNA 5-methylaminomethy 87.9 0.88 3E-05 49.2 7.5 61 277-349 169-231 (689)
307 3qv2_A 5-cytosine DNA methyltr 86.1 2.7 9.1E-05 41.4 9.2 128 216-349 10-158 (327)
308 1rjd_A PPM1P, carboxy methyl t 85.5 3 0.0001 41.1 9.3 100 216-317 98-232 (334)
309 3ps9_A TRNA 5-methylaminomethy 85.5 1.3 4.4E-05 47.7 7.1 59 277-349 177-239 (676)
310 3two_A Mannitol dehydrogenase; 85.2 0.79 2.7E-05 44.9 4.9 90 215-318 176-266 (348)
311 2dph_A Formaldehyde dismutase; 85.0 1.1 3.8E-05 44.9 6.0 98 215-317 185-299 (398)
312 1f8f_A Benzyl alcohol dehydrog 84.7 0.76 2.6E-05 45.5 4.6 94 215-318 190-290 (371)
313 1g60_A Adenine-specific methyl 84.7 0.97 3.3E-05 42.6 5.1 32 215-246 212-245 (260)
314 1eg2_A Modification methylase 84.6 1.5 5.3E-05 42.9 6.7 92 263-359 39-144 (319)
315 2km1_A Protein DRE2; yeast, an 83.8 0.73 2.5E-05 39.6 3.4 72 273-360 53-125 (136)
316 2uyo_A Hypothetical protein ML 83.8 13 0.00045 36.0 12.9 101 216-319 103-220 (310)
317 1pl8_A Human sorbitol dehydrog 83.7 1.2 4E-05 43.9 5.4 95 215-318 171-274 (356)
318 1pqw_A Polyketide synthase; ro 83.2 0.74 2.5E-05 41.0 3.4 87 215-317 38-137 (198)
319 1kol_A Formaldehyde dehydrogen 83.2 2.3 7.9E-05 42.4 7.4 99 215-317 185-300 (398)
320 1i4w_A Mitochondrial replicati 83.1 0.74 2.5E-05 46.0 3.7 75 194-273 39-117 (353)
321 1v3u_A Leukotriene B4 12- hydr 82.3 1.2 4.2E-05 43.2 4.9 90 215-317 145-244 (333)
322 1e3j_A NADP(H)-dependent ketos 81.8 2.4 8.3E-05 41.5 6.8 95 215-318 168-272 (352)
323 4dcm_A Ribosomal RNA large sub 81.6 8.2 0.00028 38.4 10.8 95 217-318 40-137 (375)
324 3fpc_A NADP-dependent alcohol 80.4 1.8 6.1E-05 42.4 5.3 91 215-317 166-266 (352)
325 3uog_A Alcohol dehydrogenase; 78.4 1.3 4.6E-05 43.7 3.7 93 215-318 189-288 (363)
326 1uuf_A YAHK, zinc-type alcohol 78.4 0.97 3.3E-05 44.9 2.6 91 215-317 194-288 (369)
327 4ej6_A Putative zinc-binding d 77.8 1.9 6.5E-05 42.7 4.6 94 215-318 182-285 (370)
328 4h0n_A DNMT2; SAH binding, tra 77.0 6.3 0.00022 38.7 8.1 126 218-348 5-146 (333)
329 2j3h_A NADP-dependent oxidored 76.9 2.2 7.4E-05 41.6 4.7 93 215-317 155-255 (345)
330 2oo3_A Protein involved in cat 76.4 3.7 0.00013 39.6 6.0 114 218-343 94-218 (283)
331 2c7p_A Modification methylase 75.8 14 0.00048 36.1 10.2 124 216-348 11-150 (327)
332 3s2e_A Zinc-containing alcohol 74.3 1.6 5.3E-05 42.6 2.8 91 215-317 166-263 (340)
333 4b7c_A Probable oxidoreductase 74.2 2 6.7E-05 41.7 3.5 90 215-317 149-248 (336)
334 3gms_A Putative NADPH:quinone 74.1 1.6 5.6E-05 42.5 2.9 88 215-318 144-244 (340)
335 2h6e_A ADH-4, D-arabinose 1-de 73.6 1.7 5.9E-05 42.4 3.0 94 216-317 171-269 (344)
336 1rjw_A ADH-HT, alcohol dehydro 73.1 4.5 0.00015 39.3 5.8 91 215-317 164-261 (339)
337 1jvb_A NAD(H)-dependent alcoho 72.8 1.9 6.4E-05 42.2 3.0 94 215-317 170-271 (347)
338 2hcy_A Alcohol dehydrogenase 1 72.4 1.5 5.1E-05 42.9 2.2 88 215-317 169-269 (347)
339 1cdo_A Alcohol dehydrogenase; 71.7 3.5 0.00012 40.7 4.7 91 215-317 192-294 (374)
340 2jhf_A Alcohol dehydrogenase E 71.2 4.5 0.00015 39.9 5.4 91 215-317 191-293 (374)
341 1yb5_A Quinone oxidoreductase; 70.6 3.4 0.00012 40.5 4.3 90 215-317 170-269 (351)
342 1p0f_A NADP-dependent alcohol 70.3 4.3 0.00015 40.0 5.1 91 215-317 191-293 (373)
343 3nx4_A Putative oxidoreductase 70.1 4.1 0.00014 39.2 4.7 87 218-317 149-241 (324)
344 2fzw_A Alcohol dehydrogenase c 69.8 4.3 0.00015 39.9 4.9 91 215-317 190-292 (373)
345 3m6i_A L-arabinitol 4-dehydrog 69.3 10 0.00035 37.0 7.5 95 215-318 179-284 (363)
346 3tka_A Ribosomal RNA small sub 68.2 4.5 0.00015 40.1 4.5 66 215-285 57-134 (347)
347 3uko_A Alcohol dehydrogenase c 68.0 4 0.00014 40.3 4.3 92 215-318 193-296 (378)
348 3tos_A CALS11; methyltransfera 67.7 10 0.00034 36.0 6.7 78 261-345 158-241 (257)
349 1e3i_A Alcohol dehydrogenase, 67.6 4.7 0.00016 39.7 4.7 92 215-318 195-298 (376)
350 3goh_A Alcohol dehydrogenase, 67.5 1.8 6.1E-05 41.7 1.5 84 215-317 142-229 (315)
351 2eih_A Alcohol dehydrogenase; 66.9 5.8 0.0002 38.5 5.1 90 215-317 166-265 (343)
352 2d8a_A PH0655, probable L-thre 66.2 5.4 0.00018 38.9 4.7 90 216-317 168-267 (348)
353 3jyn_A Quinone oxidoreductase; 65.6 3.1 0.00011 40.2 2.8 93 215-318 140-240 (325)
354 3qwb_A Probable quinone oxidor 64.7 3.7 0.00013 39.7 3.2 92 215-317 148-247 (334)
355 3jv7_A ADH-A; dehydrogenase, n 64.4 4.8 0.00016 39.1 3.9 93 215-317 171-270 (345)
356 1piw_A Hypothetical zinc-type 63.7 1.6 5.6E-05 42.9 0.4 92 215-317 179-276 (360)
357 3me5_A Cytosine-specific methy 61.9 25 0.00085 36.3 8.9 124 216-346 88-255 (482)
358 1xa0_A Putative NADPH dependen 61.8 3.4 0.00012 39.8 2.3 87 218-317 152-246 (328)
359 3ip1_A Alcohol dehydrogenase, 61.7 12 0.00041 37.3 6.4 93 215-318 213-319 (404)
360 1qor_A Quinone oxidoreductase; 61.0 4.2 0.00014 39.2 2.8 90 215-317 140-239 (327)
361 2qrv_A DNA (cytosine-5)-methyl 60.6 6.8 0.00023 37.8 4.1 72 215-286 15-90 (295)
362 4eye_A Probable oxidoreductase 60.4 4.1 0.00014 39.7 2.6 88 215-317 159-257 (342)
363 1tt7_A YHFP; alcohol dehydroge 59.6 4 0.00014 39.4 2.3 87 218-317 153-247 (330)
364 3ubt_Y Modification methylase 59.6 42 0.0014 32.0 9.7 123 218-348 2-140 (331)
365 1vj0_A Alcohol dehydrogenase, 59.3 6.4 0.00022 38.9 3.8 93 215-317 195-298 (380)
366 2b5w_A Glucose dehydrogenase; 58.8 9.1 0.00031 37.4 4.8 89 217-318 174-274 (357)
367 1iz0_A Quinone oxidoreductase; 58.7 3.7 0.00013 39.1 1.9 89 215-317 125-218 (302)
368 2j8z_A Quinone oxidoreductase; 57.8 5.9 0.0002 38.8 3.2 90 215-317 162-261 (354)
369 2c0c_A Zinc binding alcohol de 57.6 7.6 0.00026 38.1 4.0 93 215-318 163-262 (362)
370 3gaz_A Alcohol dehydrogenase s 57.5 8 0.00027 37.6 4.1 89 215-317 150-246 (343)
371 3dmg_A Probable ribosomal RNA 55.9 6.6 0.00023 39.3 3.2 89 217-317 47-139 (381)
372 4dvj_A Putative zinc-dependent 54.8 17 0.00059 35.5 6.1 92 215-317 171-270 (363)
373 1wly_A CAAR, 2-haloacrylate re 54.6 6.8 0.00023 37.8 3.1 90 215-317 145-244 (333)
374 3krt_A Crotonyl COA reductase; 52.2 19 0.00065 36.4 6.1 90 215-317 228-344 (456)
375 2zb4_A Prostaglandin reductase 51.2 11 0.00038 36.6 4.0 88 217-317 162-260 (357)
376 4a0s_A Octenoyl-COA reductase/ 50.9 11 0.00038 38.0 4.0 92 215-317 220-336 (447)
377 2cf5_A Atccad5, CAD, cinnamyl 50.3 4.2 0.00014 39.9 0.7 90 215-317 180-275 (357)
378 2cdc_A Glucose dehydrogenase g 49.4 15 0.0005 36.0 4.5 88 216-318 181-279 (366)
379 3fbg_A Putative arginate lyase 49.3 14 0.00049 35.7 4.5 91 215-317 150-248 (346)
380 4eez_A Alcohol dehydrogenase 1 47.9 20 0.00067 34.5 5.2 96 215-318 163-264 (348)
381 1boo_A Protein (N-4 cytosine-s 47.4 20 0.0007 34.6 5.2 40 215-259 252-293 (323)
382 2dq4_A L-threonine 3-dehydroge 47.2 8.1 0.00028 37.5 2.2 89 216-317 165-262 (343)
383 4dup_A Quinone oxidoreductase; 46.3 8.9 0.00031 37.4 2.4 90 215-317 167-265 (353)
384 2py6_A Methyltransferase FKBM; 44.8 18 0.00063 36.3 4.5 43 214-256 225-273 (409)
385 1yqd_A Sinapyl alcohol dehydro 44.7 6.6 0.00023 38.6 1.1 90 215-317 187-282 (366)
386 3tqh_A Quinone oxidoreductase; 43.7 16 0.00053 35.0 3.7 91 215-317 152-245 (321)
387 3gqv_A Enoyl reductase; medium 41.3 23 0.00079 34.7 4.6 89 215-317 164-263 (371)
388 3iei_A Leucine carboxyl methyl 38.2 2.8E+02 0.0097 26.8 13.1 139 216-357 91-287 (334)
389 3swr_A DNA (cytosine-5)-methyl 38.1 2.2E+02 0.0076 32.1 12.3 129 215-347 539-698 (1002)
390 1tvm_A PTS system, galactitol- 36.6 76 0.0026 25.6 6.3 55 218-287 23-77 (113)
391 3fwz_A Inner membrane protein 36.5 1.6E+02 0.0054 24.0 8.6 92 217-317 8-105 (140)
392 3arc_J Photosystem II reaction 36.2 44 0.0015 22.1 3.6 20 16-35 13-32 (40)
393 2l9u_A Receptor tyrosine-prote 35.3 24 0.00082 22.7 2.2 8 28-35 18-25 (40)
394 4a2c_A Galactitol-1-phosphate 35.0 48 0.0016 31.7 5.6 92 215-318 160-261 (346)
395 1eg2_A Modification methylase 32.1 40 0.0014 32.6 4.5 57 193-260 229-287 (319)
396 1zsy_A Mitochondrial 2-enoyl t 31.7 1.2E+02 0.004 29.2 7.9 93 215-317 167-270 (357)
397 2zwa_A Leucine carboxyl methyl 31.3 1.2E+02 0.0043 32.2 8.7 138 216-355 108-313 (695)
398 3nbm_A PTS system, lactose-spe 30.7 1.2E+02 0.0041 24.4 6.5 77 218-317 8-84 (108)
399 3ijr_A Oxidoreductase, short c 29.7 1E+02 0.0035 28.7 6.9 102 216-317 47-182 (291)
400 2vhw_A Alanine dehydrogenase; 28.1 10 0.00035 37.7 -0.6 100 215-317 167-268 (377)
401 3ggo_A Prephenate dehydrogenas 27.9 1.6E+02 0.0056 27.9 8.1 90 217-314 34-125 (314)
402 2vn8_A Reticulon-4-interacting 27.3 38 0.0013 33.1 3.4 88 215-317 183-280 (375)
403 3is3_A 17BETA-hydroxysteroid d 26.9 1.9E+02 0.0066 26.2 8.2 104 215-318 17-153 (270)
404 1whz_A Hypothetical protein; a 26.1 86 0.0029 22.8 4.5 28 331-358 7-34 (70)
405 3v2g_A 3-oxoacyl-[acyl-carrier 25.6 1.7E+02 0.0058 26.9 7.5 103 215-317 30-165 (271)
406 4ft4_B DNA (cytosine-5)-methyl 24.2 5E+02 0.017 27.8 12.0 46 301-348 417-462 (784)
407 2hwk_A Helicase NSP2; rossman 24.0 42 0.0014 32.4 2.8 65 278-349 205-279 (320)
408 3trk_A Nonstructural polyprote 23.8 26 0.0009 33.4 1.4 41 278-318 210-260 (324)
409 4gua_A Non-structural polyprot 22.4 84 0.0029 33.1 4.9 63 277-344 219-291 (670)
410 3c85_A Putative glutathione-re 21.7 2.1E+02 0.0071 24.2 6.9 91 216-317 39-139 (183)
411 1e2b_A Enzyme IIB-cellobiose; 21.4 40 0.0014 27.1 1.9 54 218-287 5-58 (106)
412 1zcj_A Peroxisomal bifunctiona 21.4 2.8E+02 0.0097 27.9 8.8 94 215-315 36-148 (463)
413 3ce6_A Adenosylhomocysteinase; 21.2 69 0.0024 33.1 4.1 89 215-318 273-362 (494)
414 3g0o_A 3-hydroxyisobutyrate de 21.2 3.9E+02 0.013 24.7 9.3 112 217-346 8-124 (303)
415 3pi7_A NADH oxidoreductase; gr 20.7 56 0.0019 31.4 3.1 31 279-317 233-263 (349)
No 1
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.63 E-value=2e-15 Score=144.94 Aligned_cols=135 Identities=14% Similarity=0.217 Sum_probs=99.4
Q ss_pred CCCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHcC-CCeEEEEecCCCCCCCCCCceEEEecccccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERG-IPSTLGVLGTKRLPYPSRSFELAHCSRCRID 291 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg-~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~ 291 (452)
+..+|||||||+|.++..|++. .++++|+++.++..+. +.+.+.+ .++.+.++|+..+|+++++||+|++.. +++
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~-~~~~~~~~~~v~~~~~d~~~l~~~~~~fD~V~~~~-~l~ 114 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVAR-AFIEGNGHQQVEYVQGDAEQMPFTDERFHIVTCRI-AAH 114 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHH-HHHHHTTCCSEEEEECCC-CCCSCTTCEEEEEEES-CGG
T ss_pred CCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHH-HHHHhcCCCceEEEEecHHhCCCCCCCEEEEEEhh-hhH
Confidence 4458999999999999999874 4666666655554433 2222334 458899999999999999999999888 688
Q ss_pred ccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhh-----------------HHHHHHHHHHHHhCCCEEEEEEece
Q 012961 292 WLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPEN-----------------RRIWNAMYDLLKSMCWKIVSKKDQT 352 (452)
Q Consensus 292 ~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~-----------------~~~~~~l~~ll~~~Gf~~v~~~~~~ 352 (452)
|.+++..+|+++.|+|||||+++++++..... +.. ....+++.++++++||+++......
T Consensus 115 ~~~d~~~~l~~~~r~LkpgG~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 191 (260)
T 1vl5_A 115 HFPNPASFVSEAYRVLKKGGQLLLVDNSAPEN-DAFDVFYNYVEKERDYSHHRAWKKSDWLKMLEEAGFELEELHCFH 191 (260)
T ss_dssp GCSCHHHHHHHHHHHEEEEEEEEEEEEEBCSS-HHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHHTCEEEEEEEEE
T ss_pred hcCCHHHHHHHHHHHcCCCCEEEEEEcCCCCC-HHHHHHHHHHHHhcCccccCCCCHHHHHHHHHHCCCeEEEEEEee
Confidence 88999999999999999999999975432111 100 0112578899999999988766543
No 2
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.63 E-value=2.1e-15 Score=140.67 Aligned_cols=136 Identities=15% Similarity=0.215 Sum_probs=103.6
Q ss_pred CCCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCC-CeEEEEecCCCCCCCCCCceEEEecccccccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGI-PSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL 293 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~-~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~ 293 (452)
+..+|||||||+|.++..|++. +..+.+.|+++.+++.++++.. ++.+..+|+..++++ ++||+|++.. ++++.
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~-~l~~~ 119 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLA---GRTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEVP-TSIDTIVSTY-AFHHL 119 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHT---TCEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCCC-SCCSEEEEES-CGGGS
T ss_pred CCCeEEEeCCCCCHHHHHHHhC---CCeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCCC-CCeEEEEECc-chhcC
Confidence 3458999999999999999875 3345555666667777777654 688999999999988 8999999887 68888
Q ss_pred ccHHH--HHHHHHHhcCCCcEEEEEeCCCCCCCh-----------------hhHH-----HHHHHHHHHHhCCCEEEEEE
Q 012961 294 QRDGI--LLLELDRLLRPGGYFVYSSPEAYAHDP-----------------ENRR-----IWNAMYDLLKSMCWKIVSKK 349 (452)
Q Consensus 294 ~d~~~--~L~ei~RvLkPGG~lvi~~p~~~~~~~-----------------~~~~-----~~~~l~~ll~~~Gf~~v~~~ 349 (452)
++... +|+++.++|||||++++.++....... .... ..+++.++++++||+++...
T Consensus 120 ~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~~ 199 (220)
T 3hnr_A 120 TDDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTFTR 199 (220)
T ss_dssp CHHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEEEE
T ss_pred ChHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEEEee
Confidence 88766 999999999999999998754321000 0000 12688999999999988777
Q ss_pred eceeEe
Q 012961 350 DQTVIW 355 (452)
Q Consensus 350 ~~~~iw 355 (452)
.....|
T Consensus 200 ~~~~~w 205 (220)
T 3hnr_A 200 LNHFVW 205 (220)
T ss_dssp CSSSEE
T ss_pred ccceEE
Confidence 655444
No 3
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.63 E-value=1.1e-15 Score=144.29 Aligned_cols=129 Identities=16% Similarity=0.144 Sum_probs=99.4
Q ss_pred CEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCC-CeEEEEecCCCCCCCCCCceEEEecccccccccc
Q 012961 217 RNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGI-PSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQR 295 (452)
Q Consensus 217 ~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~-~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~~d 295 (452)
.+|||||||+|.++..+++. +.++.+.|+++.+++.|+++.. ++.+.+.|+..+ +++++||+|++.. +++|+++
T Consensus 44 ~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~-~~~~~fD~v~~~~-~l~~~~~ 118 (250)
T 2p7i_A 44 GNLLELGSFKGDFTSRLQEH---FNDITCVEASEEAISHAQGRLKDGITYIHSRFEDA-QLPRRYDNIVLTH-VLEHIDD 118 (250)
T ss_dssp SCEEEESCTTSHHHHHHTTT---CSCEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC-CCSSCEEEEEEES-CGGGCSS
T ss_pred CcEEEECCCCCHHHHHHHHh---CCcEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHc-CcCCcccEEEEhh-HHHhhcC
Confidence 47999999999999999875 1244445566667777777644 788899998887 4678999999988 6888999
Q ss_pred HHHHHHHHH-HhcCCCcEEEEEeCCCCCC-----------------Chhh-------HHHHHHHHHHHHhCCCEEEEEEe
Q 012961 296 DGILLLELD-RLLRPGGYFVYSSPEAYAH-----------------DPEN-------RRIWNAMYDLLKSMCWKIVSKKD 350 (452)
Q Consensus 296 ~~~~L~ei~-RvLkPGG~lvi~~p~~~~~-----------------~~~~-------~~~~~~l~~ll~~~Gf~~v~~~~ 350 (452)
+..+|+++. |+|||||+++++.|..... .... ....+++.++++++||+++....
T Consensus 119 ~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 198 (250)
T 2p7i_A 119 PVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQVTYRSG 198 (250)
T ss_dssp HHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHHHHHHCCCeEEEEee
Confidence 999999999 9999999999998653210 0000 01235889999999999988764
No 4
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.63 E-value=1.8e-16 Score=156.05 Aligned_cols=185 Identities=9% Similarity=0.121 Sum_probs=125.3
Q ss_pred CCCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcCC--CeEEEEecCCCCCCCCCCceEEEecccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCR 289 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg~--~~~~~~~d~~~lp~~d~sFDlVv~s~~~ 289 (452)
+..+|||||||+|.++..+++. .|+++|+++.++..+.. .+...+. ++.+...|..++ +++||+|++.. +
T Consensus 72 ~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~-~~~~~~~~~~v~~~~~d~~~~---~~~fD~v~~~~-~ 146 (302)
T 3hem_A 72 PGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKA-MFDEVDSPRRKEVRIQGWEEF---DEPVDRIVSLG-A 146 (302)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHH-HHHHSCCSSCEEEEECCGGGC---CCCCSEEEEES-C
T ss_pred CcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHH-HHHhcCCCCceEEEECCHHHc---CCCccEEEEcc-h
Confidence 4458999999999999999864 45666665555443332 2222343 478889998776 58999999887 6
Q ss_pred ccccccH---------HHHHHHHHHhcCCCcEEEEEeCCCCCCCh----------------h----------hHHHHHHH
Q 012961 290 IDWLQRD---------GILLLELDRLLRPGGYFVYSSPEAYAHDP----------------E----------NRRIWNAM 334 (452)
Q Consensus 290 l~~~~d~---------~~~L~ei~RvLkPGG~lvi~~p~~~~~~~----------------~----------~~~~~~~l 334 (452)
++|.+++ ..+++++.++|||||++++.++....... . .....+++
T Consensus 147 ~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~s~~~~ 226 (302)
T 3hem_A 147 FEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFPGGRLPRISQV 226 (302)
T ss_dssp GGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCTTCCCCCHHHH
T ss_pred HHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCCCCCCCCHHHH
Confidence 7777554 68999999999999999997753211000 0 00112478
Q ss_pred HHHHHhCCCEEEEEEeceeEeecccchhhHhhhCCCCCCCcccC-CCCcchhhhhcccccccccccCcccccC
Q 012961 335 YDLLKSMCWKIVSKKDQTVIWAKPISNSCYLKRVPGSRPPLCSS-DDDPDVTWNVLMKACISPYSAKMHHEKG 406 (452)
Q Consensus 335 ~~ll~~~Gf~~v~~~~~~~iw~kp~~~~~~~~r~~~~~p~lc~~-~~~~~~~wy~~l~~C~~~~~~~~~~~~~ 406 (452)
..+++++||+++..+.....+.+++..+...++... +.+... ++.....|..+|..|...|..+.....+
T Consensus 227 ~~~l~~aGf~~~~~~~~~~~y~~tl~~w~~~~~~~~--~~~~~~~~~~~~~~w~~yl~~~~~~f~~~~~~~~q 297 (302)
T 3hem_A 227 DYYSSNAGWKVERYHRIGANYVPTLNAWADALQAHK--DEAIALKGQETCDIYMHYLRGCSDLFRDKYTDVCQ 297 (302)
T ss_dssp HHHHHHHTCEEEEEEECGGGHHHHHHHHHHHHHHTH--HHHHHHHCHHHHHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred HHHHHhCCcEEEEEEeCchhHHHHHHHHHHHHHHhH--HHHHHHhCHHHHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 889999999999988876666666665544433321 111111 3444567999999999988877654433
No 5
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.62 E-value=3e-15 Score=143.20 Aligned_cols=138 Identities=22% Similarity=0.258 Sum_probs=105.2
Q ss_pred CCCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcC---CCeEEEEecCCCCCCCCCCceEEEecccccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERG---IPSTLGVLGTKRLPYPSRSFELAHCSRCRID 291 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg---~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~ 291 (452)
+..+|||||||+|.++..+++.. +..+.+.|+++.+++.|+++. .++.+...|...+++++++||+|++.. +++
T Consensus 55 ~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l~ 131 (266)
T 3ujc_A 55 ENSKVLDIGSGLGGGCMYINEKY--GAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENNFDLIYSRD-AIL 131 (266)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCEEEEEEES-CGG
T ss_pred CCCEEEEECCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCcEEEEeHHH-HHH
Confidence 45589999999999999998741 334445566667777777764 568899999999999899999999887 688
Q ss_pred cc--ccHHHHHHHHHHhcCCCcEEEEEeCCCCC---CChhhH----------HHHHHHHHHHHhCCCEEEEEEeceeEe
Q 012961 292 WL--QRDGILLLELDRLLRPGGYFVYSSPEAYA---HDPENR----------RIWNAMYDLLKSMCWKIVSKKDQTVIW 355 (452)
Q Consensus 292 ~~--~d~~~~L~ei~RvLkPGG~lvi~~p~~~~---~~~~~~----------~~~~~l~~ll~~~Gf~~v~~~~~~~iw 355 (452)
|. .+...+++++.|+|||||++++.++.... ...... ...+++.++++++||+++........+
T Consensus 132 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~ 210 (266)
T 3ujc_A 132 ALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEEYADILTACNFKNVVSKDLSDYW 210 (266)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCHHHHHHHHHHTTCEEEEEEECHHHH
T ss_pred hcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCHHHHHHHHHHcCCeEEEEEeCCHHH
Confidence 88 78888999999999999999998753211 111100 013588999999999999887665433
No 6
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.62 E-value=3.8e-15 Score=143.73 Aligned_cols=155 Identities=21% Similarity=0.300 Sum_probs=109.4
Q ss_pred cccHHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcCC--Ce
Q 012961 189 HDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI--PS 263 (452)
Q Consensus 189 ~~~~~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg~--~~ 263 (452)
........+.+.+.+.. .+..+|||||||+|.++..+++. .++++|+++..+..+. +.+...+. ++
T Consensus 43 ~~~~~~~~~~l~~~~~~--------~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~-~~~~~~~~~~~~ 113 (273)
T 3bus_A 43 DDATDRLTDEMIALLDV--------RSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQAN-ARATAAGLANRV 113 (273)
T ss_dssp HHHHHHHHHHHHHHSCC--------CTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHH-HHHHHTTCTTTE
T ss_pred HHHHHHHHHHHHHhcCC--------CCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHH-HHHHhcCCCcce
Confidence 33445555556555542 24458999999999999999863 4566665555443333 22222243 58
Q ss_pred EEEEecCCCCCCCCCCceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCC-hhh---HH----------
Q 012961 264 TLGVLGTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHD-PEN---RR---------- 329 (452)
Q Consensus 264 ~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~-~~~---~~---------- 329 (452)
.+...|...+|+++++||+|++.. +++|.++...+++++.++|||||+++++++...... ... ..
T Consensus 114 ~~~~~d~~~~~~~~~~fD~v~~~~-~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (273)
T 3bus_A 114 TFSYADAMDLPFEDASFDAVWALE-SLHHMPDRGRALREMARVLRPGGTVAIADFVLLAPVEGAKKEAVDAFRAGGGVLS 192 (273)
T ss_dssp EEEECCTTSCCSCTTCEEEEEEES-CTTTSSCHHHHHHHHHTTEEEEEEEEEEEEEESSCCCHHHHHHHHHHHHHHTCCC
T ss_pred EEEECccccCCCCCCCccEEEEec-hhhhCCCHHHHHHHHHHHcCCCeEEEEEEeeccCCCChhHHHHHHHHHhhcCccC
Confidence 899999999999989999999887 688888899999999999999999999875322111 100 00
Q ss_pred --HHHHHHHHHHhCCCEEEEEEecee
Q 012961 330 --IWNAMYDLLKSMCWKIVSKKDQTV 353 (452)
Q Consensus 330 --~~~~l~~ll~~~Gf~~v~~~~~~~ 353 (452)
..+++.++++++||+++..+....
T Consensus 193 ~~~~~~~~~~l~~aGf~~~~~~~~~~ 218 (273)
T 3bus_A 193 LGGIDEYESDVRQAELVVTSTVDISA 218 (273)
T ss_dssp CCCHHHHHHHHHHTTCEEEEEEECHH
T ss_pred CCCHHHHHHHHHHcCCeEEEEEECcH
Confidence 115788999999999988776543
No 7
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.62 E-value=1e-15 Score=148.50 Aligned_cols=98 Identities=26% Similarity=0.338 Sum_probs=79.8
Q ss_pred CEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEeccccccccccH
Q 012961 217 RNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQRD 296 (452)
Q Consensus 217 ~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~~d~ 296 (452)
.+|||||||+|.++..|++. +.++.+.|+++.|++.|++ ..++.+.+++++.+++++++||+|+|+. ++||. +.
T Consensus 41 ~~vLDvGcGtG~~~~~l~~~---~~~v~gvD~s~~ml~~a~~-~~~v~~~~~~~e~~~~~~~sfD~v~~~~-~~h~~-~~ 114 (257)
T 4hg2_A 41 GDALDCGCGSGQASLGLAEF---FERVHAVDPGEAQIRQALR-HPRVTYAVAPAEDTGLPPASVDVAIAAQ-AMHWF-DL 114 (257)
T ss_dssp SEEEEESCTTTTTHHHHHTT---CSEEEEEESCHHHHHTCCC-CTTEEEEECCTTCCCCCSSCEEEEEECS-CCTTC-CH
T ss_pred CCEEEEcCCCCHHHHHHHHh---CCEEEEEeCcHHhhhhhhh-cCCceeehhhhhhhcccCCcccEEEEee-ehhHh-hH
Confidence 48999999999999999975 2334444556666666654 4578999999999999999999999988 57886 46
Q ss_pred HHHHHHHHHhcCCCcEEEEEeCCC
Q 012961 297 GILLLELDRLLRPGGYFVYSSPEA 320 (452)
Q Consensus 297 ~~~L~ei~RvLkPGG~lvi~~p~~ 320 (452)
..++.++.|+|||||.|++.....
T Consensus 115 ~~~~~e~~rvLkpgG~l~~~~~~~ 138 (257)
T 4hg2_A 115 DRFWAELRRVARPGAVFAAVTYGL 138 (257)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEECC
T ss_pred HHHHHHHHHHcCCCCEEEEEECCC
Confidence 789999999999999999876443
No 8
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.62 E-value=9e-17 Score=156.65 Aligned_cols=177 Identities=10% Similarity=0.129 Sum_probs=119.7
Q ss_pred CCCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHc----C--CCeEEEEecCCCCCCCCCCceEEEe
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALER----G--IPSTLGVLGTKRLPYPSRSFELAHC 285 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~r----g--~~~~~~~~d~~~lp~~d~sFDlVv~ 285 (452)
+..+|||||||+|.++..+++. .|+++|+++ .+++.|+++ + .++.+...|...++ ++||+|++
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~-----~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~~fD~v~~ 135 (287)
T 1kpg_A 64 PGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSK-----NQANHVQQLVANSENLRSKRVLLAGWEQFD---EPVDRIVS 135 (287)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCH-----HHHHHHHHHHHTCCCCSCEEEEESCGGGCC---CCCSEEEE
T ss_pred CcCEEEEECCcccHHHHHHHHHcCCEEEEEECCH-----HHHHHHHHHHHhcCCCCCeEEEECChhhCC---CCeeEEEE
Confidence 3458999999999999999842 455555554 444544443 3 35788889988776 78999998
Q ss_pred cccccccc--ccHHHHHHHHHHhcCCCcEEEEEeCCCCCCCh---------h---hH--------------HHHHHHHHH
Q 012961 286 SRCRIDWL--QRDGILLLELDRLLRPGGYFVYSSPEAYAHDP---------E---NR--------------RIWNAMYDL 337 (452)
Q Consensus 286 s~~~l~~~--~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~---------~---~~--------------~~~~~l~~l 337 (452)
.. +++|. .+...+++++.|+|||||++++.++....... . .. ...+++.++
T Consensus 136 ~~-~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 214 (287)
T 1kpg_A 136 IG-AFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPSIPMVQEC 214 (287)
T ss_dssp ES-CGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCCCHHHHHHH
T ss_pred eC-chhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCCCccccccccccccccccchhhhHHheeCCCCCCCCHHHHHHH
Confidence 88 57777 57788999999999999999998753211000 0 00 023578899
Q ss_pred HHhCCCEEEEEEeceeEeecccchhhHhhhCCCCCCCccc-CCCCcchhhhhcccccccccccCcc
Q 012961 338 LKSMCWKIVSKKDQTVIWAKPISNSCYLKRVPGSRPPLCS-SDDDPDVTWNVLMKACISPYSAKMH 402 (452)
Q Consensus 338 l~~~Gf~~v~~~~~~~iw~kp~~~~~~~~r~~~~~p~lc~-~~~~~~~~wy~~l~~C~~~~~~~~~ 402 (452)
++++||+++........+.+++..+....... ...+.. .++.....|..+|..|...+..+..
T Consensus 215 l~~aGf~~~~~~~~~~~y~~~~~~w~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~f~~g~~ 278 (287)
T 1kpg_A 215 ASANGFTVTRVQSLQPHYAKTLDLWSAALQAN--KGQAIALQSEEVYERYMKYLTGCAEMFRIGYI 278 (287)
T ss_dssp HHTTTCEEEEEEECHHHHHHHHHHHHHHHHHT--HHHHHHHSCHHHHHHHHHHHHHHHHHHHTTSE
T ss_pred HHhCCcEEEEEEeCcHhHHHHHHHHHHHHHHH--HHHHHHhcChHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999999998876555555555443333221 011111 1334455699999999988876543
No 9
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.62 E-value=3.7e-16 Score=148.89 Aligned_cols=130 Identities=14% Similarity=0.156 Sum_probs=96.9
Q ss_pred CCCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcC---CCeEEEEecCCCCCCCCCCceEEEeccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERG---IPSTLGVLGTKRLPYPSRSFELAHCSRC 288 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg---~~~~~~~~d~~~lp~~d~sFDlVv~s~~ 288 (452)
+..+|||||||+|.++..|+.. .++++|+ ++.+++.|+++. .++.+...|...+++++++||+|++..
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~-----s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~- 166 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLLTKLYATTDLLEP-----VKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIVIQW- 166 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTHHHHCSEEEEEES-----CHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEEEES-
T ss_pred CCCEEEEECCCcCHHHHHHHHhhcCEEEEEeC-----CHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCeEEEEEcc-
Confidence 4568999999999999998864 3555554 555556666553 357888999999998889999999988
Q ss_pred ccccc--ccHHHHHHHHHHhcCCCcEEEEEeCCCCCC-------ChhhHHHHHHHHHHHHhCCCEEEEEEe
Q 012961 289 RIDWL--QRDGILLLELDRLLRPGGYFVYSSPEAYAH-------DPENRRIWNAMYDLLKSMCWKIVSKKD 350 (452)
Q Consensus 289 ~l~~~--~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~-------~~~~~~~~~~l~~ll~~~Gf~~v~~~~ 350 (452)
+++|. .+...+++++.++|||||+++++++..... .......-+++.++++++||+++....
T Consensus 167 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 237 (254)
T 1xtp_A 167 TAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKEAF 237 (254)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEEEE
T ss_pred hhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEeee
Confidence 57777 456889999999999999999987521110 000011236889999999999987664
No 10
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.61 E-value=3.6e-15 Score=140.98 Aligned_cols=131 Identities=24% Similarity=0.270 Sum_probs=102.1
Q ss_pred CCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHc--CCCeEEEEecCCCCCCCCCCceEEEecccccccc
Q 012961 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER--GIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL 293 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~r--g~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~ 293 (452)
..+|||||||+|.++..+++. +..+.+.|+++.+++.++++ ..++.+...|...+++++++||+|++.. +++|.
T Consensus 54 ~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l~~~ 129 (242)
T 3l8d_A 54 EAEVLDVGCGDGYGTYKLSRT---GYKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAIN-SLEWT 129 (242)
T ss_dssp TCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEES-CTTSS
T ss_pred CCeEEEEcCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcC-hHhhc
Confidence 358999999999999999986 33455556667777777766 4568899999999999899999999887 68888
Q ss_pred ccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChh--hH-----------HHHHHHHHHHHhCCCEEEEEEe
Q 012961 294 QRDGILLLELDRLLRPGGYFVYSSPEAYAHDPE--NR-----------RIWNAMYDLLKSMCWKIVSKKD 350 (452)
Q Consensus 294 ~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~--~~-----------~~~~~l~~ll~~~Gf~~v~~~~ 350 (452)
+++..+++++.++|+|||+++++.+........ .. ..-.++.++++++||+++....
T Consensus 130 ~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 199 (242)
T 3l8d_A 130 EEPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDGIG 199 (242)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred cCHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEeec
Confidence 999999999999999999999987533211100 00 1125789999999999987653
No 11
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.61 E-value=3.3e-15 Score=146.25 Aligned_cols=153 Identities=16% Similarity=0.144 Sum_probs=109.2
Q ss_pred ccHHHHHHHHHHHh----cCCCCccCCCCCCCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcC--
Q 012961 190 DGADKYILALARML----KFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERG-- 260 (452)
Q Consensus 190 ~~~~~y~~~l~~~l----~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg-- 260 (452)
.......+.+.+.+ .. .+..+|||||||+|.++..|++. .++++|+++.++..+... +...+
T Consensus 61 ~~~~~~~~~l~~~l~~~~~~--------~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~-~~~~~~~ 131 (297)
T 2o57_A 61 EASLRTDEWLASELAMTGVL--------QRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEY-NNQAGLA 131 (297)
T ss_dssp HHHHHHHHHHHHHHHHTTCC--------CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHH-HHHHTCT
T ss_pred HHHHHHHHHHHHHhhhccCC--------CCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHH-HHhcCCC
Confidence 34455556666666 32 24458999999999999999864 566666665555443322 22233
Q ss_pred CCeEEEEecCCCCCCCCCCceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCC-hh-hHH---------
Q 012961 261 IPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHD-PE-NRR--------- 329 (452)
Q Consensus 261 ~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~-~~-~~~--------- 329 (452)
.++.+..+|...+|+++++||+|++.. +++|.++...+++++.|+|||||+++++++...... .. ...
T Consensus 132 ~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (297)
T 2o57_A 132 DNITVKYGSFLEIPCEDNSYDFIWSQD-AFLHSPDKLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDRIKLHD 210 (297)
T ss_dssp TTEEEEECCTTSCSSCTTCEEEEEEES-CGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHHHTCSS
T ss_pred cceEEEEcCcccCCCCCCCEeEEEecc-hhhhcCCHHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHHhcCCC
Confidence 358899999999999999999999887 678888899999999999999999999875322111 10 001
Q ss_pred --HHHHHHHHHHhCCCEEEEEEece
Q 012961 330 --IWNAMYDLLKSMCWKIVSKKDQT 352 (452)
Q Consensus 330 --~~~~l~~ll~~~Gf~~v~~~~~~ 352 (452)
...++.++++++||+++......
T Consensus 211 ~~~~~~~~~~l~~aGf~~~~~~~~~ 235 (297)
T 2o57_A 211 MGSLGLYRSLAKECGLVTLRTFSRP 235 (297)
T ss_dssp CCCHHHHHHHHHHTTEEEEEEEECH
T ss_pred CCCHHHHHHHHHHCCCeEEEEEECc
Confidence 12578889999999999877643
No 12
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.61 E-value=3e-15 Score=138.61 Aligned_cols=149 Identities=9% Similarity=0.060 Sum_probs=105.3
Q ss_pred ccHHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcC--CCeE
Q 012961 190 DGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERG--IPST 264 (452)
Q Consensus 190 ~~~~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg--~~~~ 264 (452)
+......+.+.+.+.. ...+|||||||+|.++..|++. .++++|+++..+..+... +...+ .++.
T Consensus 27 ~~~~~~~~~~~~~~~~---------~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~-~~~~~~~~~~~ 96 (219)
T 3dlc_A 27 PIYPIIAENIINRFGI---------TAGTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKN-IADANLNDRIQ 96 (219)
T ss_dssp THHHHHHHHHHHHHCC---------CEEEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHH-HHHTTCTTTEE
T ss_pred cccHHHHHHHHHhcCC---------CCCEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHH-HHhccccCceE
Confidence 3344455555555542 2228999999999999999874 566666665555443322 22223 3588
Q ss_pred EEEecCCCCCCCCCCceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChh------------------
Q 012961 265 LGVLGTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPE------------------ 326 (452)
Q Consensus 265 ~~~~d~~~lp~~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~------------------ 326 (452)
+...|...+++++++||+|++.. +++|..+...+++++.++|+|||+++++++........
T Consensus 97 ~~~~d~~~~~~~~~~~D~v~~~~-~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (219)
T 3dlc_A 97 IVQGDVHNIPIEDNYADLIVSRG-SVFFWEDVATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNR 175 (219)
T ss_dssp EEECBTTBCSSCTTCEEEEEEES-CGGGCSCHHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHH
T ss_pred EEEcCHHHCCCCcccccEEEECc-hHhhccCHHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhh
Confidence 99999999999999999999888 67888999999999999999999999986432110000
Q ss_pred ---hHHHHHHHHHHHHhCCCEEEEEE
Q 012961 327 ---NRRIWNAMYDLLKSMCWKIVSKK 349 (452)
Q Consensus 327 ---~~~~~~~l~~ll~~~Gf~~v~~~ 349 (452)
....-+++.++++++||+.+...
T Consensus 176 ~~~~~~~~~~~~~~l~~aGf~~v~~~ 201 (219)
T 3dlc_A 176 KNISQENVERFQNVLDEIGISSYEII 201 (219)
T ss_dssp HHSSHHHHHHHHHHHHHHTCSSEEEE
T ss_pred hccccCCHHHHHHHHHHcCCCeEEEE
Confidence 00112678899999999877654
No 13
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.60 E-value=9.6e-16 Score=141.43 Aligned_cols=131 Identities=14% Similarity=0.092 Sum_probs=102.8
Q ss_pred CEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEeccccccccc--
Q 012961 217 RNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ-- 294 (452)
Q Consensus 217 ~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~~-- 294 (452)
.+|||||||+|.++..|++. +..+.+.|+++.+++.|+++..++.+..+|+..+++++++||+|++.. +++|..
T Consensus 43 ~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l~~~~~~ 118 (203)
T 3h2b_A 43 GVILDVGSGTGRWTGHLASL---GHQIEGLEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWY-SLIHMGPG 118 (203)
T ss_dssp SCEEEETCTTCHHHHHHHHT---TCCEEEECCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEES-SSTTCCTT
T ss_pred CeEEEecCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehh-hHhcCCHH
Confidence 47999999999999999885 334445566677778888877789999999999998889999999988 577765
Q ss_pred cHHHHHHHHHHhcCCCcEEEEEeCCCCCCC-------hhhHHHHHHHHHHHHhCCCEEEEEEec
Q 012961 295 RDGILLLELDRLLRPGGYFVYSSPEAYAHD-------PENRRIWNAMYDLLKSMCWKIVSKKDQ 351 (452)
Q Consensus 295 d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~-------~~~~~~~~~l~~ll~~~Gf~~v~~~~~ 351 (452)
+...+++++.++|||||+++++.+...... .......+++.++++++||+++.....
T Consensus 119 ~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 182 (203)
T 3h2b_A 119 ELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHWD 182 (203)
T ss_dssp THHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEEC
T ss_pred HHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEec
Confidence 778899999999999999999875432100 000112468999999999999887754
No 14
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.60 E-value=3e-15 Score=142.90 Aligned_cols=150 Identities=13% Similarity=0.111 Sum_probs=107.8
Q ss_pred cccHHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcCC--Ce
Q 012961 189 HDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI--PS 263 (452)
Q Consensus 189 ~~~~~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg~--~~ 263 (452)
.+......+.+.+.+.. .+..+|||||||+|.++..|++. .++++|+++.++..+. +.+...+. ++
T Consensus 18 ~~~~~~~~~~l~~~~~~--------~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~-~~~~~~~~~~~v 88 (256)
T 1nkv_A 18 NPFTEEKYATLGRVLRM--------KPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAK-RRAEELGVSERV 88 (256)
T ss_dssp SSCCHHHHHHHHHHTCC--------CTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHH-HHHHHTTCTTTE
T ss_pred CCCCHHHHHHHHHhcCC--------CCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHH-HHHHhcCCCcce
Confidence 34455666667666653 24458999999999999999863 5667776666654443 23333343 58
Q ss_pred EEEEecCCCCCCCCCCceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCC--hh-----------hHHH
Q 012961 264 TLGVLGTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHD--PE-----------NRRI 330 (452)
Q Consensus 264 ~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~--~~-----------~~~~ 330 (452)
.+..+|+..+++ +++||+|+|.. ++++..+...+|+++.|+|||||++++.++...... .. ....
T Consensus 89 ~~~~~d~~~~~~-~~~fD~V~~~~-~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (256)
T 1nkv_A 89 HFIHNDAAGYVA-NEKCDVAACVG-ATWIAGGFAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLT 166 (256)
T ss_dssp EEEESCCTTCCC-SSCEEEEEEES-CGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCC
T ss_pred EEEECChHhCCc-CCCCCEEEECC-ChHhcCCHHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHHHHhcccccccCC
Confidence 999999999888 78999999877 677888889999999999999999999875321111 10 1112
Q ss_pred HHHHHHHHHhCCCEEEEEE
Q 012961 331 WNAMYDLLKSMCWKIVSKK 349 (452)
Q Consensus 331 ~~~l~~ll~~~Gf~~v~~~ 349 (452)
..++.++++++||+++...
T Consensus 167 ~~~~~~~l~~aGf~~~~~~ 185 (256)
T 1nkv_A 167 LPGLVGAFDDLGYDVVEMV 185 (256)
T ss_dssp HHHHHHHHHTTTBCCCEEE
T ss_pred HHHHHHHHHHCCCeeEEEE
Confidence 3678899999999877643
No 15
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.59 E-value=1.6e-14 Score=134.52 Aligned_cols=135 Identities=16% Similarity=0.135 Sum_probs=101.5
Q ss_pred CCCEEEEECCCCchHHHHHhhC-----CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEecccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCR 289 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~-----~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~ 289 (452)
+..+|||||||+|.++..+++. .++++|+++.++..+..........++.+...|...+++++++||+|+++. +
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~ 115 (219)
T 3dh0_A 37 EGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNTVDFIFMAF-T 115 (219)
T ss_dssp TTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSCEEEEEEES-C
T ss_pred CCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCCeeEEEeeh-h
Confidence 3458999999999999988753 566777766665554433332222368999999999999989999999888 6
Q ss_pred ccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCC----ChhhHHHHHHHHHHHHhCCCEEEEEEe
Q 012961 290 IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAH----DPENRRIWNAMYDLLKSMCWKIVSKKD 350 (452)
Q Consensus 290 l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~----~~~~~~~~~~l~~ll~~~Gf~~v~~~~ 350 (452)
+++..+...+++++.++|+|||++++++...... ........+++.++++++||+++....
T Consensus 116 l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 180 (219)
T 3dh0_A 116 FHELSEPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVVE 180 (219)
T ss_dssp GGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEEE
T ss_pred hhhcCCHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEEe
Confidence 8888899999999999999999999987432211 111111346899999999999887654
No 16
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.59 E-value=3.2e-15 Score=142.82 Aligned_cols=133 Identities=17% Similarity=0.222 Sum_probs=101.6
Q ss_pred CCCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcC--CCeEEEEecCCCCCCCCCCceEEEeccccccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERG--IPSTLGVLGTKRLPYPSRSFELAHCSRCRIDW 292 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg--~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~ 292 (452)
+..+|||||||+|.++..+++... ..+.+.|+++.+++.|+++. .++.+..+|+..+++++++||+|++.. ++++
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l~~ 120 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGA--KKVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVLSSL-ALHY 120 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEEEES-CGGG
T ss_pred CCCEEEEECCCCCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEEEch-hhhh
Confidence 456899999999999999987521 14444456666667776663 568899999999999889999999988 6888
Q ss_pred cccHHHHHHHHHHhcCCCcEEEEEeCCCCC---------CChh------------------------h----HHHHHHHH
Q 012961 293 LQRDGILLLELDRLLRPGGYFVYSSPEAYA---------HDPE------------------------N----RRIWNAMY 335 (452)
Q Consensus 293 ~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~---------~~~~------------------------~----~~~~~~l~ 335 (452)
..+...+++++.++|||||+++++.+.... .... . ....+++.
T Consensus 121 ~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~ 200 (253)
T 3g5l_A 121 IASFDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFLGEDVQKYHRTVTTYI 200 (253)
T ss_dssp CSCHHHHHHHHHHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEEEETTEEEEEECCCHHHHH
T ss_pred hhhHHHHHHHHHHHcCCCcEEEEEeCCCccccCccccceeccCCceEEEEeccccccceEEEeeccccCccEecCHHHHH
Confidence 899999999999999999999998543210 0000 0 00347899
Q ss_pred HHHHhCCCEEEEEEe
Q 012961 336 DLLKSMCWKIVSKKD 350 (452)
Q Consensus 336 ~ll~~~Gf~~v~~~~ 350 (452)
++++++||+++....
T Consensus 201 ~~l~~aGF~~~~~~e 215 (253)
T 3g5l_A 201 QTLLKNGFQINSVIE 215 (253)
T ss_dssp HHHHHTTEEEEEEEC
T ss_pred HHHHHcCCeeeeeec
Confidence 999999999987764
No 17
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.59 E-value=1.5e-14 Score=139.58 Aligned_cols=134 Identities=18% Similarity=0.213 Sum_probs=100.2
Q ss_pred CCCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcC--CCeEEEEecCCCCCCCCCCceEEEecccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERG--IPSTLGVLGTKRLPYPSRSFELAHCSRCR 289 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg--~~~~~~~~d~~~lp~~d~sFDlVv~s~~~ 289 (452)
++.+|||||||+|.++..+++. .|+++|+++..+..+. +.+...+ .++.+...|...+++++++||+|+|.. +
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~-~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~-~ 123 (267)
T 3kkz_A 46 EKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFN-RNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEG-A 123 (267)
T ss_dssp TTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHH-HHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESS-C
T ss_pred CCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHH-HHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcC-C
Confidence 4568999999999999999875 5666666665554443 2222334 348999999999999889999999988 5
Q ss_pred ccccccHHHHHHHHHHhcCCCcEEEEEeCCCCC--CChhhHHHH----------HHHHHHHHhCCCEEEEEEec
Q 012961 290 IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYA--HDPENRRIW----------NAMYDLLKSMCWKIVSKKDQ 351 (452)
Q Consensus 290 l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~--~~~~~~~~~----------~~l~~ll~~~Gf~~v~~~~~ 351 (452)
+++. +...+++++.++|||||+++++++.... ........| +++.++++++||+++.....
T Consensus 124 ~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~ 196 (267)
T 3kkz_A 124 IYNI-GFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHKAGYLPVATFIL 196 (267)
T ss_dssp GGGT-CHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEEEEEEEC
T ss_pred ceec-CHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEEEEEC
Confidence 6776 7888999999999999999998754211 112222233 47889999999999877653
No 18
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.58 E-value=2.4e-15 Score=142.87 Aligned_cols=129 Identities=18% Similarity=0.210 Sum_probs=97.1
Q ss_pred CCCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCC--CCCCCCceEEEeccccccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRL--PYPSRSFELAHCSRCRIDW 292 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~l--p~~d~sFDlVv~s~~~l~~ 292 (452)
+..+|||||||+|.++..+++. +..+.+.|+++.+++.++++ +.+...|...+ ++++++||+|+|.. +++|
T Consensus 41 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~---~~~~~~d~~~~~~~~~~~~fD~i~~~~-~l~~ 113 (240)
T 3dli_A 41 GCRRVLDIGCGRGEFLELCKEE---GIESIGVDINEDMIKFCEGK---FNVVKSDAIEYLKSLPDKYLDGVMISH-FVEH 113 (240)
T ss_dssp TCSCEEEETCTTTHHHHHHHHH---TCCEEEECSCHHHHHHHHTT---SEEECSCHHHHHHTSCTTCBSEEEEES-CGGG
T ss_pred CCCeEEEEeCCCCHHHHHHHhC---CCcEEEEECCHHHHHHHHhh---cceeeccHHHHhhhcCCCCeeEEEECC-chhh
Confidence 3458999999999999999874 23444556667777777766 77788887665 78889999999887 6888
Q ss_pred cccH--HHHHHHHHHhcCCCcEEEEEeCCCCCCCh--------hh--HHHHHHHHHHHHhCCCEEEEEEe
Q 012961 293 LQRD--GILLLELDRLLRPGGYFVYSSPEAYAHDP--------EN--RRIWNAMYDLLKSMCWKIVSKKD 350 (452)
Q Consensus 293 ~~d~--~~~L~ei~RvLkPGG~lvi~~p~~~~~~~--------~~--~~~~~~l~~ll~~~Gf~~v~~~~ 350 (452)
..++ ..+++++.++|||||++++..+....... .. ...-+++..+++++||+++....
T Consensus 114 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~ 183 (240)
T 3dli_A 114 LDPERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRDVKIEF 183 (240)
T ss_dssp SCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEEEEEE
T ss_pred CCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeEEEEEE
Confidence 8744 88999999999999999998875421100 00 01126889999999999887654
No 19
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.58 E-value=1.7e-14 Score=137.70 Aligned_cols=133 Identities=16% Similarity=0.246 Sum_probs=99.4
Q ss_pred CCCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcCC--CeEEEEecCCCCCCCCCCceEEEecccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCR 289 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg~--~~~~~~~d~~~lp~~d~sFDlVv~s~~~ 289 (452)
+..+|||||||+|.++..+++. .|+++|+++..+..+. +.+...+. ++.+...|...+++++++||+|++.. +
T Consensus 46 ~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~ 123 (257)
T 3f4k_A 46 DDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFN-ENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEG-A 123 (257)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHH-HHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEES-C
T ss_pred CCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHH-HHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecC-h
Confidence 3458999999999999999873 5677777666554443 22333343 38899999999999989999999988 5
Q ss_pred ccccccHHHHHHHHHHhcCCCcEEEEEeCCCCC--CChhhHHHH----------HHHHHHHHhCCCEEEEEEe
Q 012961 290 IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYA--HDPENRRIW----------NAMYDLLKSMCWKIVSKKD 350 (452)
Q Consensus 290 l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~--~~~~~~~~~----------~~l~~ll~~~Gf~~v~~~~ 350 (452)
+++. +...+++++.++|||||+++++++.... ........| +++.++++++||+++....
T Consensus 124 l~~~-~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~ 195 (257)
T 3f4k_A 124 IYNI-GFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKMERAGYTPTAHFI 195 (257)
T ss_dssp SCCC-CHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHHHTTEEEEEEEE
T ss_pred Hhhc-CHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCeEEEEEE
Confidence 6766 7888999999999999999998754221 111122222 5788999999999987553
No 20
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.58 E-value=4.3e-14 Score=134.30 Aligned_cols=134 Identities=16% Similarity=0.210 Sum_probs=100.6
Q ss_pred CCCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHcC-CCeEEEEecCCCCCCCCCCceEEEecccccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERG-IPSTLGVLGTKRLPYPSRSFELAHCSRCRID 291 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg-~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~ 291 (452)
+..+|||||||+|.++..+++. .++++|+++.++..+.... .+.+ .++.+...|...+++++++||+|++.. +++
T Consensus 21 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~-~l~ 98 (239)
T 1xxl_A 21 AEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFA-QEKGVENVRFQQGTAESLPFPDDSFDIITCRY-AAH 98 (239)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHH-HHHTCCSEEEEECBTTBCCSCTTCEEEEEEES-CGG
T ss_pred CCCEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHHHH-HHcCCCCeEEEecccccCCCCCCcEEEEEECC-chh
Confidence 4568999999999999999874 5667776666554443222 2233 458899999999999989999999987 577
Q ss_pred ccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhh-----------------HHHHHHHHHHHHhCCCEEEEEEec
Q 012961 292 WLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPEN-----------------RRIWNAMYDLLKSMCWKIVSKKDQ 351 (452)
Q Consensus 292 ~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~-----------------~~~~~~l~~ll~~~Gf~~v~~~~~ 351 (452)
|..+...++.++.++|||||++++.++..... ... ....+++.++++++||+++.....
T Consensus 99 ~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~~~~ 174 (239)
T 1xxl_A 99 HFSDVRKAVREVARVLKQDGRFLLVDHYAPED-PVLDEFVNHLNRLRDPSHVRESSLSEWQAMFSANQLAYQDIQKW 174 (239)
T ss_dssp GCSCHHHHHHHHHHHEEEEEEEEEEEECBCSS-HHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHTTEEEEEEEEE
T ss_pred hccCHHHHHHHHHHHcCCCcEEEEEEcCCCCC-hhHHHHHHHHHHhccccccCCCCHHHHHHHHHHCCCcEEEEEee
Confidence 88899999999999999999999986432111 100 012357889999999998876654
No 21
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.57 E-value=6.9e-15 Score=139.73 Aligned_cols=134 Identities=18% Similarity=0.163 Sum_probs=97.2
Q ss_pred CCCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcC-----CCeEEEEecCCCCCCCCCCceEEEecccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERG-----IPSTLGVLGTKRLPYPSRSFELAHCSRCR 289 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg-----~~~~~~~~d~~~lp~~d~sFDlVv~s~~~ 289 (452)
+..+|||||||+|.++..|++.. ...+.+.|+++.+++.|+++. .++.+...|+..+++++++||+|++.. +
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~ 155 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQW-V 155 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEES-C
T ss_pred CCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcc-h
Confidence 45689999999999999988752 223334445555555555442 246788999989988888999999987 6
Q ss_pred ccccccH--HHHHHHHHHhcCCCcEEEEEeCCCCC-----C-ChhhHHHHHHHHHHHHhCCCEEEEEEec
Q 012961 290 IDWLQRD--GILLLELDRLLRPGGYFVYSSPEAYA-----H-DPENRRIWNAMYDLLKSMCWKIVSKKDQ 351 (452)
Q Consensus 290 l~~~~d~--~~~L~ei~RvLkPGG~lvi~~p~~~~-----~-~~~~~~~~~~l~~ll~~~Gf~~v~~~~~ 351 (452)
+++.++. ..+++++.++|+|||+++++++.... . ........+++.++++++||+++.....
T Consensus 156 l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 225 (241)
T 2ex4_A 156 IGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEERQ 225 (241)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEEEEC
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEeeec
Confidence 7777764 47999999999999999997753221 0 0001113468999999999999887654
No 22
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.56 E-value=1.3e-14 Score=134.57 Aligned_cols=130 Identities=14% Similarity=0.159 Sum_probs=97.8
Q ss_pred CCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcC-CCeEEEEecCCCCCCCCCCceEEEeccccccccc
Q 012961 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERG-IPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ 294 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg-~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~~ 294 (452)
..+|||||||+|.++..|++. +..+.+.|+++.+++.+++.+ .++.+...|+..+ +++++||+|+++. +++|.+
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~-~l~~~~ 121 (218)
T 3ou2_A 47 RGDVLELASGTGYWTRHLSGL---ADRVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDW-TPDRQWDAVFFAH-WLAHVP 121 (218)
T ss_dssp CSEEEEESCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHGGGCCTTEEEEECCTTSC-CCSSCEEEEEEES-CGGGSC
T ss_pred CCeEEEECCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHhcCCCCeEEEecccccC-CCCCceeEEEEec-hhhcCC
Confidence 348999999999999999875 334445566666777777766 5689999999888 7789999999988 688877
Q ss_pred cH--HHHHHHHHHhcCCCcEEEEEeCCCCCCCh-----------------hh--------HHHHHHHHHHHHhCCCEEEE
Q 012961 295 RD--GILLLELDRLLRPGGYFVYSSPEAYAHDP-----------------EN--------RRIWNAMYDLLKSMCWKIVS 347 (452)
Q Consensus 295 d~--~~~L~ei~RvLkPGG~lvi~~p~~~~~~~-----------------~~--------~~~~~~l~~ll~~~Gf~~v~ 347 (452)
++ ..+++++.++|+|||.++++++....... .. ...-+++.++++++||++..
T Consensus 122 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~ 201 (218)
T 3ou2_A 122 DDRFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAELTERLTALGWSCSV 201 (218)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEECCCC------------CEEEEECTTSCEEEEECCCCCHHHHHHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhhhcccccceeeecCCcchhhHhhcCCCHHHHHHHHHHCCCEEEe
Confidence 75 77999999999999999998753211000 00 01236899999999999765
Q ss_pred EEe
Q 012961 348 KKD 350 (452)
Q Consensus 348 ~~~ 350 (452)
.+.
T Consensus 202 ~~~ 204 (218)
T 3ou2_A 202 DEV 204 (218)
T ss_dssp EEE
T ss_pred eec
Confidence 543
No 23
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.56 E-value=1.1e-14 Score=140.29 Aligned_cols=145 Identities=14% Similarity=0.097 Sum_probs=106.7
Q ss_pred HHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCC
Q 012961 193 DKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKR 272 (452)
Q Consensus 193 ~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~ 272 (452)
..+.+.+.+.+.. .+..+|||||||+|.++..+++. +..+.+.|+++.+++.++++. ++.+.+.|+..
T Consensus 20 ~~~~~~l~~~~~~--------~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~-~~~~~~~d~~~ 87 (261)
T 3ege_A 20 IRIVNAIINLLNL--------PKGSVIADIGAGTGGYSVALANQ---GLFVYAVEPSIVMRQQAVVHP-QVEWFTGYAEN 87 (261)
T ss_dssp HHHHHHHHHHHCC--------CTTCEEEEETCTTSHHHHHHHTT---TCEEEEECSCHHHHHSSCCCT-TEEEECCCTTS
T ss_pred HHHHHHHHHHhCC--------CCCCEEEEEcCcccHHHHHHHhC---CCEEEEEeCCHHHHHHHHhcc-CCEEEECchhh
Confidence 3566666666652 24568999999999999999874 234444556666666665554 88999999999
Q ss_pred CCCCCCCceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCC--------CChhhHH-------HHHHHHHH
Q 012961 273 LPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYA--------HDPENRR-------IWNAMYDL 337 (452)
Q Consensus 273 lp~~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~--------~~~~~~~-------~~~~l~~l 337 (452)
+++++++||+|++.. +++|..+...+++++.|+|| ||++++.++.... ..+.... ..+.+. +
T Consensus 88 ~~~~~~~fD~v~~~~-~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 164 (261)
T 3ege_A 88 LALPDKSVDGVISIL-AIHHFSHLEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWLYDYFPFLWEDALRFLPLDEQIN-L 164 (261)
T ss_dssp CCSCTTCBSEEEEES-CGGGCSSHHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGGGGTCHHHHHHHHTSCCHHHHHH-H
T ss_pred CCCCCCCEeEEEEcc-hHhhccCHHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHHHHHHHHHhhhhhhhCCCHHHHH-H
Confidence 999999999999988 68888999999999999999 9988887654211 1111111 124677 9
Q ss_pred HHhCCCEEEEEEece
Q 012961 338 LKSMCWKIVSKKDQT 352 (452)
Q Consensus 338 l~~~Gf~~v~~~~~~ 352 (452)
++++||..+..+...
T Consensus 165 l~~aGF~~v~~~~~~ 179 (261)
T 3ege_A 165 LQENTKRRVEAIPFL 179 (261)
T ss_dssp HHHHHCSEEEEEECC
T ss_pred HHHcCCCceeEEEec
Confidence 999999888776543
No 24
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.55 E-value=2.6e-14 Score=141.49 Aligned_cols=135 Identities=14% Similarity=0.094 Sum_probs=100.8
Q ss_pred CCCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcCC--CeEEEEecCCCCCCCCCCceEEEecccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCR 289 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg~--~~~~~~~d~~~lp~~d~sFDlVv~s~~~ 289 (452)
+..+|||||||+|.++..|++. .|+++|+++.++..+. +.+...+. ++.+..+|+..+++++++||+|++.. +
T Consensus 117 ~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~-~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~-~ 194 (312)
T 3vc1_A 117 PDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGN-RRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNE-S 194 (312)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHH-HHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEES-C
T ss_pred CCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECC-c
Confidence 4568999999999999999864 5667766665554443 22333343 58999999999999989999999987 5
Q ss_pred ccccccHHHHHHHHHHhcCCCcEEEEEeCCCCC---CChhhHH-----------HHHHHHHHHHhCCCEEEEEEece
Q 012961 290 IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYA---HDPENRR-----------IWNAMYDLLKSMCWKIVSKKDQT 352 (452)
Q Consensus 290 l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~---~~~~~~~-----------~~~~l~~ll~~~Gf~~v~~~~~~ 352 (452)
+++. +...+++++.|+|||||++++.++.... ....... ..+++.++++++||+++..+...
T Consensus 195 l~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~~~~ 270 (312)
T 3vc1_A 195 TMYV-DLHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRLVPHTIVDLT 270 (312)
T ss_dssp GGGS-CHHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTEEEEEEEECH
T ss_pred hhhC-CHHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCCEEEEEEeCC
Confidence 7777 5888999999999999999998753221 1111111 12578999999999999887654
No 25
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.55 E-value=2.5e-14 Score=138.30 Aligned_cols=136 Identities=18% Similarity=0.357 Sum_probs=101.0
Q ss_pred CCCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHcC-CCeEEEEecCCCCCCCCCCceEEEecccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERG-IPSTLGVLGTKRLPYPSRSFELAHCSRCR 289 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg-~~~~~~~~d~~~lp~~d~sFDlVv~s~~~ 289 (452)
+..+|||||||+|.++..+++. .++++|+++..+..+... +...+ .++.+...|...+++++++||+|++.. +
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~ 114 (276)
T 3mgg_A 37 PGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKAREN-TEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCF-V 114 (276)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHH-HHHTTCCSEEEEECCGGGCCSCTTCEEEEEEES-C
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHH-HHHcCCCCcEEEEcccccCCCCCCCeeEEEEec-h
Confidence 4458999999999999999863 466676666555444322 22223 368899999999999899999999888 6
Q ss_pred ccccccHHHHHHHHHHhcCCCcEEEEEeCCCCC-----CChhhHHHH-----------------HHHHHHHHhCCCEEEE
Q 012961 290 IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYA-----HDPENRRIW-----------------NAMYDLLKSMCWKIVS 347 (452)
Q Consensus 290 l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~-----~~~~~~~~~-----------------~~l~~ll~~~Gf~~v~ 347 (452)
+++.+++..+++++.++|||||++++..+.... ........| .++..+++++||+++.
T Consensus 115 l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~v~ 194 (276)
T 3mgg_A 115 LEHLQSPEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRVQAYMKGNSLVGRQIYPLLQESGFEKIR 194 (276)
T ss_dssp GGGCSCHHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHHHHHHHHTTCCTTGGGGHHHHHHHTTCEEEE
T ss_pred hhhcCCHHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHCCCCeEE
Confidence 888899999999999999999999998753211 111111111 3678899999999988
Q ss_pred EEece
Q 012961 348 KKDQT 352 (452)
Q Consensus 348 ~~~~~ 352 (452)
.+...
T Consensus 195 ~~~~~ 199 (276)
T 3mgg_A 195 VEPRM 199 (276)
T ss_dssp EEEEE
T ss_pred EeeEE
Confidence 77553
No 26
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.55 E-value=4.2e-14 Score=132.47 Aligned_cols=132 Identities=20% Similarity=0.276 Sum_probs=98.9
Q ss_pred CCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHc----CC------CeEEEEecCCCCCCCCCCceEEEe
Q 012961 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GI------PSTLGVLGTKRLPYPSRSFELAHC 285 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~r----g~------~~~~~~~d~~~lp~~d~sFDlVv~ 285 (452)
..+|||||||+|.++..++.. +..+.+.|+++.+++.++++ +. ++.+...|...+++++++||+|++
T Consensus 31 ~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 107 (235)
T 3sm3_A 31 DDEILDIGCGSGKISLELASK---GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVM 107 (235)
T ss_dssp TCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCeEEEECCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEE
Confidence 458999999999999999875 23444445556666666653 22 368889999999998899999998
Q ss_pred ccccccccccHH---HHHHHHHHhcCCCcEEEEEeCCCCCCChhh--------------------------------HHH
Q 012961 286 SRCRIDWLQRDG---ILLLELDRLLRPGGYFVYSSPEAYAHDPEN--------------------------------RRI 330 (452)
Q Consensus 286 s~~~l~~~~d~~---~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~--------------------------------~~~ 330 (452)
.. ++++..++. .+++++.++|||||+++++++......... ...
T Consensus 108 ~~-~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (235)
T 3sm3_A 108 QA-FLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHFT 186 (235)
T ss_dssp ES-CGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBC
T ss_pred cc-hhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHHHHhhhhccchhhhcceEecccccCCcceeeEeCC
Confidence 87 688887776 799999999999999999875332111100 012
Q ss_pred HHHHHHHHHhCCCEEEEEEec
Q 012961 331 WNAMYDLLKSMCWKIVSKKDQ 351 (452)
Q Consensus 331 ~~~l~~ll~~~Gf~~v~~~~~ 351 (452)
.+++.++++++||+++.....
T Consensus 187 ~~~l~~ll~~aGf~~~~~~~~ 207 (235)
T 3sm3_A 187 EKELVFLLTDCRFEIDYFRVK 207 (235)
T ss_dssp HHHHHHHHHTTTEEEEEEEEE
T ss_pred HHHHHHHHHHcCCEEEEEEec
Confidence 368999999999999887653
No 27
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.55 E-value=5.3e-15 Score=139.45 Aligned_cols=133 Identities=17% Similarity=0.203 Sum_probs=96.5
Q ss_pred CCCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCC---CeEEEEecCCCCCCCCCCceEEEecccccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGI---PSTLGVLGTKRLPYPSRSFELAHCSRCRID 291 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~---~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~ 291 (452)
+..+|||||||+|.++..+++.. .+..+.+.|+++.+++.|+++.. ++.+...|...++++ ++||+|++.. +++
T Consensus 44 ~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~-~l~ 120 (234)
T 3dtn_A 44 ENPDILDLGAGTGLLSAFLMEKY-PEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFE-EKYDMVVSAL-SIH 120 (234)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCC-SCEEEEEEES-CGG
T ss_pred CCCeEEEecCCCCHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCC-CCceEEEEeC-ccc
Confidence 45689999999999999998741 12344444555666666665522 688999999999887 8999999987 688
Q ss_pred ccccHH--HHHHHHHHhcCCCcEEEEEeCCCCCCC--------------------hhhH------------HHHHHHHHH
Q 012961 292 WLQRDG--ILLLELDRLLRPGGYFVYSSPEAYAHD--------------------PENR------------RIWNAMYDL 337 (452)
Q Consensus 292 ~~~d~~--~~L~ei~RvLkPGG~lvi~~p~~~~~~--------------------~~~~------------~~~~~l~~l 337 (452)
+..+.. .+++++.|+|||||+++++++...... .... ...+++.++
T Consensus 121 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 200 (234)
T 3dtn_A 121 HLEDEDKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAGYERSKLDKDIEMNQQLNW 200 (234)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTTC----CCCCCBHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccccccCHHHHHHH
Confidence 877665 499999999999999999874321110 0000 012567789
Q ss_pred HHhCCCEEEEEEe
Q 012961 338 LKSMCWKIVSKKD 350 (452)
Q Consensus 338 l~~~Gf~~v~~~~ 350 (452)
++++||+.++...
T Consensus 201 l~~aGF~~v~~~~ 213 (234)
T 3dtn_A 201 LKEAGFRDVSCIY 213 (234)
T ss_dssp HHHTTCEEEEEEE
T ss_pred HHHcCCCceeeee
Confidence 9999999887654
No 28
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.54 E-value=3.4e-14 Score=138.05 Aligned_cols=133 Identities=12% Similarity=0.176 Sum_probs=101.2
Q ss_pred CCCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEeccccccccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ 294 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~~ 294 (452)
+..+|||||||+|.++..+++. +..+.+.|+++.+++.++++..++.+.++|+..+++ +++||+|++.. +++|..
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~-~l~~~~ 131 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQS---GAEVLGTDNAATMIEKARQNYPHLHFDVADARNFRV-DKPLDAVFSNA-MLHWVK 131 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHCTTSCEEECCTTTCCC-SSCEEEEEEES-CGGGCS
T ss_pred CCCEEEEecCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHhhCCCCEEEECChhhCCc-CCCcCEEEEcc-hhhhCc
Confidence 3458999999999999999873 334445566666777777766678899999999987 47999999887 688889
Q ss_pred cHHHHHHHHHHhcCCCcEEEEEeCCCCCCChh-----------------h-----HHHHHHHHHHHHhCCCEEEEEEece
Q 012961 295 RDGILLLELDRLLRPGGYFVYSSPEAYAHDPE-----------------N-----RRIWNAMYDLLKSMCWKIVSKKDQT 352 (452)
Q Consensus 295 d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~-----------------~-----~~~~~~l~~ll~~~Gf~~v~~~~~~ 352 (452)
++..+++++.|+|||||++++..+........ . ...-+++.++++++||+++..+...
T Consensus 132 d~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 211 (279)
T 3ccf_A 132 EPEAAIASIHQALKSGGRFVAEFGGKGNIKYILEALYNALETLGIHNPQALNPWYFPSIGEYVNILEKQGFDVTYAALFN 211 (279)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECTTTTHHHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHHHHHHHHHTEEEEEEEEEE
T ss_pred CHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHhcCCccccCcCceeCCCHHHHHHHHHHcCCEEEEEEEec
Confidence 99999999999999999999987643210000 0 0012568889999999988766443
No 29
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.54 E-value=8e-15 Score=136.53 Aligned_cols=129 Identities=11% Similarity=0.023 Sum_probs=88.2
Q ss_pred CCCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHc-----------------CCCeEEEEecCCCCCC
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALER-----------------GIPSTLGVLGTKRLPY 275 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~r-----------------g~~~~~~~~d~~~lp~ 275 (452)
+..+|||+|||+|..+..|++. .|+|+|+ |+.+++.|+++ ..++.+.++|+..+++
T Consensus 22 ~~~~vLD~GCG~G~~~~~la~~g~~V~gvD~-----S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~ 96 (203)
T 1pjz_A 22 PGARVLVPLCGKSQDMSWLSGQGYHVVGAEL-----SEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTA 96 (203)
T ss_dssp TTCEEEETTTCCSHHHHHHHHHCCEEEEEEE-----CHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTH
T ss_pred CCCEEEEeCCCCcHhHHHHHHCCCeEEEEeC-----CHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCc
Confidence 3458999999999999999874 4555555 45555555443 3468899999999987
Q ss_pred CC-CCceEEEecccccccccc--HHHHHHHHHHhcCCCcEEEEEeCCCCC---CChhhHHHHHHHHHHHHhCCCEEEEEE
Q 012961 276 PS-RSFELAHCSRCRIDWLQR--DGILLLELDRLLRPGGYFVYSSPEAYA---HDPENRRIWNAMYDLLKSMCWKIVSKK 349 (452)
Q Consensus 276 ~d-~sFDlVv~s~~~l~~~~d--~~~~L~ei~RvLkPGG~lvi~~p~~~~---~~~~~~~~~~~l~~ll~~~Gf~~v~~~ 349 (452)
++ ++||+|++.. ++++++. ...+++++.|+|||||++++....... ..+.....-+++.+++++ ||+++..+
T Consensus 97 ~~~~~fD~v~~~~-~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~-gf~i~~~~ 174 (203)
T 1pjz_A 97 RDIGHCAAFYDRA-AMIALPADMRERYVQHLEALMPQACSGLLITLEYDQALLEGPPFSVPQTWLHRVMSG-NWEVTKVG 174 (203)
T ss_dssp HHHHSEEEEEEES-CGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCCCCCHHHHHHTSCS-SEEEEEEE
T ss_pred ccCCCEEEEEECc-chhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCccccCCCCCCCCHHHHHHHhcC-CcEEEEec
Confidence 75 7999999876 4666543 356999999999999984443311100 000000123578888888 99887655
Q ss_pred e
Q 012961 350 D 350 (452)
Q Consensus 350 ~ 350 (452)
.
T Consensus 175 ~ 175 (203)
T 1pjz_A 175 G 175 (203)
T ss_dssp E
T ss_pred c
Confidence 4
No 30
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.54 E-value=2.5e-14 Score=135.07 Aligned_cols=132 Identities=23% Similarity=0.353 Sum_probs=100.8
Q ss_pred CCCEEEEECCCCchHHHHHhhCCCccc-cCChhhhhHHHHHHHHHcCC--CeEEEEecCCCCCCCCCCceEEEecccccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSHDIIAM-SLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCRID 291 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~~v~~v-dis~~dis~~~~~~A~~rg~--~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~ 291 (452)
+..+|||||||+|.++..+++. +. .+.+.|+++.+++.|+++.. ++.+...|...+++++++||+|++.. +++
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~---~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l~ 118 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEH---GASYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLAYSSL-ALH 118 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT---TCSEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEEEEEES-CGG
T ss_pred CCCEEEEEcCcCCHHHHHHHHC---CCCeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCceEEEEec-ccc
Confidence 3458999999999999999875 22 44555666677777777643 57888999998988889999999888 688
Q ss_pred ccccHHHHHHHHHHhcCCCcEEEEEeCCCC---------CCCh-------------------h----h----HHHHHHHH
Q 012961 292 WLQRDGILLLELDRLLRPGGYFVYSSPEAY---------AHDP-------------------E----N----RRIWNAMY 335 (452)
Q Consensus 292 ~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~---------~~~~-------------------~----~----~~~~~~l~ 335 (452)
+.++...+++++.++|+|||+++++.+... .... . . ....+++.
T Consensus 119 ~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~ 198 (243)
T 3bkw_A 119 YVEDVARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAKGVVKHHRTVGTTL 198 (243)
T ss_dssp GCSCHHHHHHHHHHHEEEEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHHHSCCEEECCHHHHH
T ss_pred ccchHHHHHHHHHHhcCcCcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeeeccCceEEEeccHHHHH
Confidence 888999999999999999999999874311 0000 0 0 01246889
Q ss_pred HHHHhCCCEEEEEEe
Q 012961 336 DLLKSMCWKIVSKKD 350 (452)
Q Consensus 336 ~ll~~~Gf~~v~~~~ 350 (452)
++++++||+++....
T Consensus 199 ~~l~~aGF~~~~~~~ 213 (243)
T 3bkw_A 199 NALIRSGFAIEHVEE 213 (243)
T ss_dssp HHHHHTTCEEEEEEE
T ss_pred HHHHHcCCEeeeecc
Confidence 999999999987664
No 31
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.54 E-value=3e-14 Score=136.96 Aligned_cols=98 Identities=18% Similarity=0.235 Sum_probs=80.8
Q ss_pred CCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEeccccccccc-
Q 012961 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ- 294 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~~- 294 (452)
..+|||||||+|.++..|++. +..+.+.|+++.+++.|+++..++.+..+|+..+++ +++||+|+|...+++|+.
T Consensus 51 ~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~~~~~ 126 (263)
T 3pfg_A 51 AASLLDVACGTGMHLRHLADS---FGTVEGLELSADMLAIARRRNPDAVLHHGDMRDFSL-GRRFSAVTCMFSSIGHLAG 126 (263)
T ss_dssp CCEEEEETCTTSHHHHHHTTT---SSEEEEEESCHHHHHHHHHHCTTSEEEECCTTTCCC-SCCEEEEEECTTGGGGSCH
T ss_pred CCcEEEeCCcCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhCCCCEEEECChHHCCc-cCCcCEEEEcCchhhhcCC
Confidence 358999999999999999875 234555566777778888877788999999999888 689999999874677774
Q ss_pred --cHHHHHHHHHHhcCCCcEEEEEe
Q 012961 295 --RDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 295 --d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
+...+++++.++|||||++++..
T Consensus 127 ~~~~~~~l~~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 127 QAELDAALERFAAHVLPDGVVVVEP 151 (263)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 55678999999999999999963
No 32
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.54 E-value=3.2e-14 Score=138.11 Aligned_cols=101 Identities=16% Similarity=0.182 Sum_probs=74.7
Q ss_pred CCCEEEEECCCCchHHHHHhhC-CCccccCChhhhhHHHHHHHHHc----C--CCeEEEEecCCCCCCCCCCceEEEecc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH-DIIAMSLAPNDVHENQIQFALER----G--IPSTLGVLGTKRLPYPSRSFELAHCSR 287 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~-~v~~vdis~~dis~~~~~~A~~r----g--~~~~~~~~d~~~lp~~d~sFDlVv~s~ 287 (452)
++.+|||||||+|.++..|++. .-.+..+.+.|+++.+++.|+++ + .++.+.++|+.++|++ .||+|+++.
T Consensus 70 ~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~--~~d~v~~~~ 147 (261)
T 4gek_A 70 PGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIE--NASMVVLNF 147 (261)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCC--SEEEEEEES
T ss_pred CCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccccc--ccccceeee
Confidence 3458999999999999999863 11223333444455555555443 2 3688999999998875 599999887
Q ss_pred ccccccccH--HHHHHHHHHhcCCCcEEEEEeC
Q 012961 288 CRIDWLQRD--GILLLELDRLLRPGGYFVYSSP 318 (452)
Q Consensus 288 ~~l~~~~d~--~~~L~ei~RvLkPGG~lvi~~p 318 (452)
++||+++. ..+|++++|+|||||.|+++++
T Consensus 148 -~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~ 179 (261)
T 4gek_A 148 -TLQFLEPSERQALLDKIYQGLNPGGALVLSEK 179 (261)
T ss_dssp -CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -eeeecCchhHhHHHHHHHHHcCCCcEEEEEec
Confidence 68887654 4689999999999999999864
No 33
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.54 E-value=8.3e-15 Score=136.08 Aligned_cols=130 Identities=15% Similarity=0.179 Sum_probs=96.7
Q ss_pred CCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEeccccccccc-
Q 012961 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ- 294 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~~- 294 (452)
..+|||||||+|.++..+++. +..+.+.|+++.+++.++++. ++.+...|...++ ++++||+|+|+. ++++..
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~-~~~~~~~d~~~~~-~~~~fD~v~~~~-~l~~~~~ 117 (211)
T 3e23_A 44 GAKILELGCGAGYQAEAMLAA---GFDVDATDGSPELAAEASRRL-GRPVRTMLFHQLD-AIDAYDAVWAHA-CLLHVPR 117 (211)
T ss_dssp TCEEEESSCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHH-TSCCEECCGGGCC-CCSCEEEEEECS-CGGGSCH
T ss_pred CCcEEEECCCCCHHHHHHHHc---CCeEEEECCCHHHHHHHHHhc-CCceEEeeeccCC-CCCcEEEEEecC-chhhcCH
Confidence 458999999999999999875 234444455566666666552 4567788888888 778999999988 577776
Q ss_pred -cHHHHHHHHHHhcCCCcEEEEEeCCCCCCChh------hHHHHHHHHHHHHhCC-CEEEEEEec
Q 012961 295 -RDGILLLELDRLLRPGGYFVYSSPEAYAHDPE------NRRIWNAMYDLLKSMC-WKIVSKKDQ 351 (452)
Q Consensus 295 -d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~------~~~~~~~l~~ll~~~G-f~~v~~~~~ 351 (452)
+...+++++.++|||||+++++.+........ .....+++.++++++| |+++.....
T Consensus 118 ~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~ 182 (211)
T 3e23_A 118 DELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAVESS 182 (211)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEEEec
Confidence 66789999999999999999987643211100 0112468999999999 999877653
No 34
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.54 E-value=2.2e-14 Score=139.70 Aligned_cols=131 Identities=21% Similarity=0.276 Sum_probs=98.3
Q ss_pred CCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHc----C--CCeEEEEecCCCCC-CCCCCceEEEec
Q 012961 216 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALER----G--IPSTLGVLGTKRLP-YPSRSFELAHCS 286 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~r----g--~~~~~~~~d~~~lp-~~d~sFDlVv~s 286 (452)
+.+|||||||+|.++..|++. .++++|+++ .+++.|+++ + .++.+..+|...++ +++++||+|++.
T Consensus 69 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~-----~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~ 143 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKMAERGHQVILCDLSA-----QMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFH 143 (285)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTCEEEEEESCH-----HHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEE
T ss_pred CCEEEEeCCcchHHHHHHHHCCCEEEEEECCH-----HHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEEC
Confidence 458999999999999999875 455555554 444444433 3 35789999998887 778999999998
Q ss_pred cccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCC-------------------C------ChhhHHHHHHHHHHHHhC
Q 012961 287 RCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYA-------------------H------DPENRRIWNAMYDLLKSM 341 (452)
Q Consensus 287 ~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~-------------------~------~~~~~~~~~~l~~ll~~~ 341 (452)
. +++|.+++..+++++.++|||||++++..+.... . .......-+++..+++++
T Consensus 144 ~-~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a 222 (285)
T 4htf_A 144 A-VLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYLWLEEA 222 (285)
T ss_dssp S-CGGGCSCHHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHHHHHHHHT
T ss_pred c-hhhcccCHHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHHHHHHHHC
Confidence 7 6888899999999999999999999998753110 0 000001126899999999
Q ss_pred CCEEEEEEece
Q 012961 342 CWKIVSKKDQT 352 (452)
Q Consensus 342 Gf~~v~~~~~~ 352 (452)
||+++......
T Consensus 223 Gf~v~~~~~~~ 233 (285)
T 4htf_A 223 GWQIMGKTGVR 233 (285)
T ss_dssp TCEEEEEEEES
T ss_pred CCceeeeeeEE
Confidence 99999877653
No 35
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.54 E-value=1.5e-14 Score=138.09 Aligned_cols=132 Identities=15% Similarity=0.209 Sum_probs=97.7
Q ss_pred CCCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEeccccccccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ 294 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~~ 294 (452)
+..+|||||||+|.++..+++.. .+..+.+.|+++.+++.++++..++.+...|...++ ++++||+|+++. +++|.+
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~-~l~~~~ 109 (259)
T 2p35_A 33 RVLNGYDLGCGPGNSTELLTDRY-GVNVITGIDSDDDMLEKAADRLPNTNFGKADLATWK-PAQKADLLYANA-VFQWVP 109 (259)
T ss_dssp CCSSEEEETCTTTHHHHHHHHHH-CTTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCC-CSSCEEEEEEES-CGGGST
T ss_pred CCCEEEEecCcCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhCCCcEEEECChhhcC-ccCCcCEEEEeC-chhhCC
Confidence 34589999999999999988630 122334445556666777776677899999999988 778999999887 688889
Q ss_pred cHHHHHHHHHHhcCCCcEEEEEeCCCCCCCh------------------h------hHHHHHHHHHHHHhCCCEEEEEE
Q 012961 295 RDGILLLELDRLLRPGGYFVYSSPEAYAHDP------------------E------NRRIWNAMYDLLKSMCWKIVSKK 349 (452)
Q Consensus 295 d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~------------------~------~~~~~~~l~~ll~~~Gf~~v~~~ 349 (452)
+...+++++.++|||||+++++.+....... . ....-+++.++++++||++...+
T Consensus 110 ~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~~ 188 (259)
T 2p35_A 110 DHLAVLSQLMDQLESGGVLAVQMPDNLQEPTHIAMHETADGGPWKDAFSGGGLRRKPLPPPSDYFNALSPKSSRVDVWH 188 (259)
T ss_dssp THHHHHHHHGGGEEEEEEEEEEEECCTTSHHHHHHHHHHHHSTTGGGC-------CCCCCHHHHHHHHGGGEEEEEEEE
T ss_pred CHHHHHHHHHHhcCCCeEEEEEeCCCCCcHHHHHHHHHhcCcchHHHhccccccccCCCCHHHHHHHHHhcCCceEEEE
Confidence 9999999999999999999998864321100 0 00112578899999999754433
No 36
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.53 E-value=2.3e-14 Score=146.30 Aligned_cols=135 Identities=18% Similarity=0.173 Sum_probs=98.6
Q ss_pred CCCEEEEECCCCchHHHHHhhC-----CCccccCChhhhhHHHHHHHHHc----C----CCeEEEEecCCCC------CC
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALER----G----IPSTLGVLGTKRL------PY 275 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~-----~v~~vdis~~dis~~~~~~A~~r----g----~~~~~~~~d~~~l------p~ 275 (452)
+..+|||||||+|.++..|++. .|+++|+++.++..+........ | .++.+..+|+..+ ++
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~ 162 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGV 162 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCC
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCC
Confidence 4568999999999999888763 46666665554433332211110 3 5789999999887 89
Q ss_pred CCCCceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhH--------------HHHHHHHHHHHhC
Q 012961 276 PSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENR--------------RIWNAMYDLLKSM 341 (452)
Q Consensus 276 ~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~--------------~~~~~l~~ll~~~ 341 (452)
++++||+|+++. ++++.+++..+|+++.|+|||||+|+++++.......... ..++++.++++++
T Consensus 163 ~~~~fD~V~~~~-~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~a 241 (383)
T 4fsd_A 163 PDSSVDIVISNC-VCNLSTNKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRRLVAEA 241 (383)
T ss_dssp CTTCEEEEEEES-CGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHHHHHHT
T ss_pred CCCCEEEEEEcc-chhcCCCHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHHHHHHC
Confidence 999999999887 6888899999999999999999999998753322111111 1237899999999
Q ss_pred CCEEEEEEe
Q 012961 342 CWKIVSKKD 350 (452)
Q Consensus 342 Gf~~v~~~~ 350 (452)
||+.+....
T Consensus 242 GF~~v~~~~ 250 (383)
T 4fsd_A 242 GFRDVRLVS 250 (383)
T ss_dssp TCCCEEEEE
T ss_pred CCceEEEEe
Confidence 998776544
No 37
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.53 E-value=7.2e-14 Score=136.40 Aligned_cols=133 Identities=14% Similarity=0.188 Sum_probs=96.7
Q ss_pred CCCEEEEECCCCchHHHHHhhC-----CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEecccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCR 289 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~-----~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~ 289 (452)
+..+|||||||+|.++..+++. .|+++|+++.++..+. +.+...+.++.+.+.|+..++++ ++||+|++.. +
T Consensus 22 ~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~-~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~-~ 98 (284)
T 3gu3_A 22 KPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEAR-ELFRLLPYDSEFLEGDATEIELN-DKYDIAICHA-F 98 (284)
T ss_dssp SCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHH-HHHHSSSSEEEEEESCTTTCCCS-SCEEEEEEES-C
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-HHHHhcCCceEEEEcchhhcCcC-CCeeEEEECC-h
Confidence 4568999999999999999864 4556665555443332 22222344788999999999885 6999999888 6
Q ss_pred ccccccHHHHHHHHHHhcCCCcEEEEEeCCC------CCCCh----hh--HHHH------------------HHHHHHHH
Q 012961 290 IDWLQRDGILLLELDRLLRPGGYFVYSSPEA------YAHDP----EN--RRIW------------------NAMYDLLK 339 (452)
Q Consensus 290 l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~------~~~~~----~~--~~~~------------------~~l~~ll~ 339 (452)
+++.++...+++++.++|||||++++..+.. +..+. .. ...| +++.++++
T Consensus 99 l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 178 (284)
T 3gu3_A 99 LLHMTTPETMLQKMIHSVKKGGKIICFEPHWISNMASYLLDGEKQSEFIQLGVLQKLFESDTQRNGKDGNIGMKIPIYLS 178 (284)
T ss_dssp GGGCSSHHHHHHHHHHTEEEEEEEEEEECCHHHHHHSEEETTSCHHHHCCHHHHHHHHHHHHHHTCCCTTGGGTHHHHHH
T ss_pred hhcCCCHHHHHHHHHHHcCCCCEEEEEecchhcccccceecCcchhhccchHHHHHHHHHHhhhhcccccHHHHHHHHHH
Confidence 8888999999999999999999999998761 11110 00 0111 35788999
Q ss_pred hCCCEEEEEEe
Q 012961 340 SMCWKIVSKKD 350 (452)
Q Consensus 340 ~~Gf~~v~~~~ 350 (452)
++||+.+....
T Consensus 179 ~aGF~~v~~~~ 189 (284)
T 3gu3_A 179 ELGVKNIECRV 189 (284)
T ss_dssp HTTCEEEEEEE
T ss_pred HcCCCeEEEEE
Confidence 99999887653
No 38
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.53 E-value=4e-14 Score=135.27 Aligned_cols=130 Identities=15% Similarity=0.196 Sum_probs=97.0
Q ss_pred CCCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHc----CCCeEEEEecCCCCCCCCCCceEEEeccccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GIPSTLGVLGTKRLPYPSRSFELAHCSRCRI 290 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~r----g~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l 290 (452)
+..+|||||||+|.++..+++. +..+.+.|+++.+++.++++ ..++.+...|...+++++++||+|++.. ++
T Consensus 39 ~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l 114 (263)
T 2yqz_A 39 EEPVFLELGVGTGRIALPLIAR---GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVH-LW 114 (263)
T ss_dssp SCCEEEEETCTTSTTHHHHHTT---TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEES-CG
T ss_pred CCCEEEEeCCcCCHHHHHHHHC---CCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECC-ch
Confidence 3458999999999999999875 23444445556666666655 3568999999999999889999999887 68
Q ss_pred cccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCCh----------------------hhHHHHHHHHHHHHhCCCEEEEE
Q 012961 291 DWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDP----------------------ENRRIWNAMYDLLKSMCWKIVSK 348 (452)
Q Consensus 291 ~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~----------------------~~~~~~~~l~~ll~~~Gf~~v~~ 348 (452)
+|.++...+++++.++|||||++++..+... ... .....-+++.++++++||+++..
T Consensus 115 ~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 193 (263)
T 2yqz_A 115 HLVPDWPKVLAEAIRVLKPGGALLEGWDQAE-ASPEWTLQERWRAFAAEEGFPVERGLHAKRLKEVEEALRRLGLKPRTR 193 (263)
T ss_dssp GGCTTHHHHHHHHHHHEEEEEEEEEEEEEEC-CCHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHTTCCCEEE
T ss_pred hhcCCHHHHHHHHHHHCCCCcEEEEEecCCC-ccHHHHHHHHHHHHHHHhCCCcccccccCCHHHHHHHHHHcCCCcceE
Confidence 8888999999999999999999998722110 000 00112246788899999987655
Q ss_pred E
Q 012961 349 K 349 (452)
Q Consensus 349 ~ 349 (452)
.
T Consensus 194 ~ 194 (263)
T 2yqz_A 194 E 194 (263)
T ss_dssp E
T ss_pred E
Confidence 4
No 39
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.52 E-value=3.4e-14 Score=139.53 Aligned_cols=100 Identities=20% Similarity=0.205 Sum_probs=76.7
Q ss_pred EEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHcC----CCeEEEEecCCCCCCCCCCceEEEecccccc
Q 012961 218 NVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERG----IPSTLGVLGTKRLPYPSRSFELAHCSRCRID 291 (452)
Q Consensus 218 ~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg----~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~ 291 (452)
+|||||||+|.++..|++. .|+++|+++.++..+.. .+...+ .++.+.++|+..+++ +++||+|+|+..+++
T Consensus 85 ~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~-~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~~~~~ 162 (299)
T 3g2m_A 85 PVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRK-RLAEAPADVRDRCTLVQGDMSAFAL-DKRFGTVVISSGSIN 162 (299)
T ss_dssp CEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHH-HHHTSCHHHHTTEEEEECBTTBCCC-SCCEEEEEECHHHHT
T ss_pred cEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHH-HHhhcccccccceEEEeCchhcCCc-CCCcCEEEECCcccc
Confidence 7999999999999999875 45666555544433321 122222 568999999999988 589999998876788
Q ss_pred cccc--HHHHHHHHHHhcCCCcEEEEEeCC
Q 012961 292 WLQR--DGILLLELDRLLRPGGYFVYSSPE 319 (452)
Q Consensus 292 ~~~d--~~~~L~ei~RvLkPGG~lvi~~p~ 319 (452)
+... ...+|+++.++|||||+|++..+.
T Consensus 163 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 192 (299)
T 3g2m_A 163 ELDEADRRGLYASVREHLEPGGKFLLSLAM 192 (299)
T ss_dssp TSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cCCHHHHHHHHHHHHHHcCCCcEEEEEeec
Confidence 7653 477999999999999999998753
No 40
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.52 E-value=6e-14 Score=131.40 Aligned_cols=126 Identities=18% Similarity=0.221 Sum_probs=98.2
Q ss_pred CCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEecccccccccc
Q 012961 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQR 295 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~~d 295 (452)
..+|||||||+|.++..++.. +++|+ ++.+++.++++ ++.+...|...+++++++||+|++.. ++++.++
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~--~~vD~-----s~~~~~~a~~~--~~~~~~~d~~~~~~~~~~fD~v~~~~-~l~~~~~ 117 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK--IGVEP-----SERMAEIARKR--GVFVLKGTAENLPLKDESFDFALMVT-TICFVDD 117 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC--EEEES-----CHHHHHHHHHT--TCEEEECBTTBCCSCTTCEEEEEEES-CGGGSSC
T ss_pred CCcEEEeCCCCCHHHHHHHHH--hccCC-----CHHHHHHHHhc--CCEEEEcccccCCCCCCCeeEEEEcc-hHhhccC
Confidence 347999999999999999876 66655 45556666666 57888899999998888999999888 6888889
Q ss_pred HHHHHHHHHHhcCCCcEEEEEeCCCCCCCh---------------hhHHHHHHHHHHHHhCCCEEEEEEec
Q 012961 296 DGILLLELDRLLRPGGYFVYSSPEAYAHDP---------------ENRRIWNAMYDLLKSMCWKIVSKKDQ 351 (452)
Q Consensus 296 ~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~---------------~~~~~~~~l~~ll~~~Gf~~v~~~~~ 351 (452)
+..+++++.++|+|||+++++.+....... ......+++.++++++||+++.....
T Consensus 118 ~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~ 188 (219)
T 1vlm_A 118 PERALKEAYRILKKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKVVQT 188 (219)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEEecc
Confidence 999999999999999999998764321000 00012368999999999998876643
No 41
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.51 E-value=1.1e-13 Score=125.43 Aligned_cols=127 Identities=16% Similarity=0.221 Sum_probs=100.4
Q ss_pred CCCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEecccccccc-
Q 012961 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL- 293 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~- 293 (452)
+..+|||||||+|.++..++.. +.++.+.|+++.+++.++++..++.+...|...+++++++||+|++...++++.
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~ 122 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQ---GHDVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVSAGNVMGFLA 122 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEECCCCGGGSC
T ss_pred CCCeEEEECCCCCHHHHHHHHC---CCcEEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEECCcHHhhcC
Confidence 3458999999999999999875 335555567777778888777778999999988888888999999874467776
Q ss_pred -ccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEEEe
Q 012961 294 -QRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKD 350 (452)
Q Consensus 294 -~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~ 350 (452)
++...+++++.++|+|||++++..+..... ..+++..+++++||+++....
T Consensus 123 ~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~------~~~~~~~~l~~~Gf~~~~~~~ 174 (195)
T 3cgg_A 123 EDGREPALANIHRALGADGRAVIGFGAGRGW------VFGDFLEVAERVGLELENAFE 174 (195)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEETTSSC------CHHHHHHHHHHHTEEEEEEES
T ss_pred hHHHHHHHHHHHHHhCCCCEEEEEeCCCCCc------CHHHHHHHHHHcCCEEeeeec
Confidence 344779999999999999999987654221 245788899999999876653
No 42
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.51 E-value=3.1e-14 Score=134.50 Aligned_cols=130 Identities=17% Similarity=0.105 Sum_probs=93.9
Q ss_pred CEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcC------CCeEEEEecCCCCCCCCCCceEEEeccccc
Q 012961 217 RNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERG------IPSTLGVLGTKRLPYPSRSFELAHCSRCRI 290 (452)
Q Consensus 217 ~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg------~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l 290 (452)
.+|||||||+|.++..|+.. +..+.+.|+++.+++.|+++. .++.+.++|+..++ ++++||+|++.. ++
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~-~l 142 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASP---ERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR-PTELFDLIFDYV-FF 142 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBT---TEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC-CSSCEEEEEEES-ST
T ss_pred CCEEEeCCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC-CCCCeeEEEECh-hh
Confidence 48999999999999999874 233344444555555555442 24789999998877 446899999887 57
Q ss_pred cccc--cHHHHHHHHHHhcCCCcEEEEEeCCCCCCC--hhhHHHHHHHHHHHHhCCCEEEEEEec
Q 012961 291 DWLQ--RDGILLLELDRLLRPGGYFVYSSPEAYAHD--PENRRIWNAMYDLLKSMCWKIVSKKDQ 351 (452)
Q Consensus 291 ~~~~--d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~--~~~~~~~~~l~~ll~~~Gf~~v~~~~~ 351 (452)
++++ +...+++++.++|||||++++......... .......+++.++++++||+++..+..
T Consensus 143 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 207 (235)
T 3lcc_A 143 CAIEPEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSVEEN 207 (235)
T ss_dssp TTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEEEEC
T ss_pred hcCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEEEec
Confidence 7776 678899999999999999998765332111 000112368899999999999877643
No 43
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.50 E-value=4.2e-14 Score=126.70 Aligned_cols=128 Identities=13% Similarity=0.120 Sum_probs=96.2
Q ss_pred CCCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEeccccccccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ 294 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~~ 294 (452)
+..+|||||||+|.++..+++.. ..+.+.|+++.+++.++++..++.+...| +++++++||+|++.. ++++.+
T Consensus 17 ~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~v~~~~~d---~~~~~~~~D~v~~~~-~l~~~~ 89 (170)
T 3i9f_A 17 KKGVIVDYGCGNGFYCKYLLEFA---TKLYCIDINVIALKEVKEKFDSVITLSDP---KEIPDNSVDFILFAN-SFHDMD 89 (170)
T ss_dssp CCEEEEEETCTTCTTHHHHHTTE---EEEEEECSCHHHHHHHHHHCTTSEEESSG---GGSCTTCEEEEEEES-CSTTCS
T ss_pred CCCeEEEECCCCCHHHHHHHhhc---CeEEEEeCCHHHHHHHHHhCCCcEEEeCC---CCCCCCceEEEEEcc-chhccc
Confidence 34589999999999999998752 14445566666777777776678888877 777888999999888 688888
Q ss_pred cHHHHHHHHHHhcCCCcEEEEEeCCCCCCC----hhhHHHHHHHHHHHHhCCCEEEEEEec
Q 012961 295 RDGILLLELDRLLRPGGYFVYSSPEAYAHD----PENRRIWNAMYDLLKSMCWKIVSKKDQ 351 (452)
Q Consensus 295 d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~----~~~~~~~~~l~~ll~~~Gf~~v~~~~~ 351 (452)
+...+++++.++|||||++++.++...... .......+++.++++ ||+++.....
T Consensus 90 ~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~~~ 148 (170)
T 3i9f_A 90 DKQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKRFNP 148 (170)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEEECS
T ss_pred CHHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEccCC
Confidence 999999999999999999999875322110 111112357778887 9999877653
No 44
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.50 E-value=2.8e-15 Score=148.46 Aligned_cols=182 Identities=9% Similarity=0.087 Sum_probs=119.0
Q ss_pred CCCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHc----C--CCeEEEEecCCCCCCCCCCceEEEe
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALER----G--IPSTLGVLGTKRLPYPSRSFELAHC 285 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~r----g--~~~~~~~~d~~~lp~~d~sFDlVv~ 285 (452)
+..+|||||||+|.++..+++. .|+++|+++. +++.|+++ + .++.+...|...++ ++||+|++
T Consensus 90 ~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~-----~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~fD~v~~ 161 (318)
T 2fk8_A 90 PGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKN-----QHARCEQVLASIDTNRSRQVLLQGWEDFA---EPVDRIVS 161 (318)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHH-----HHHHHHHHHHTSCCSSCEEEEESCGGGCC---CCCSEEEE
T ss_pred CcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHH-----HHHHHHHHHHhcCCCCceEEEECChHHCC---CCcCEEEE
Confidence 3458999999999999999864 4556655554 44444443 3 24788888988775 78999998
Q ss_pred cccccccc--ccHHHHHHHHHHhcCCCcEEEEEeCCCCCCCh----------------hh----------HHHHHHHHHH
Q 012961 286 SRCRIDWL--QRDGILLLELDRLLRPGGYFVYSSPEAYAHDP----------------EN----------RRIWNAMYDL 337 (452)
Q Consensus 286 s~~~l~~~--~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~----------------~~----------~~~~~~l~~l 337 (452)
.. +++|. ++...+++++.++|||||++++.++....... .. ....+++.++
T Consensus 162 ~~-~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 240 (318)
T 2fk8_A 162 IE-AFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPSTEMMVEH 240 (318)
T ss_dssp ES-CGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCCCHHHHHHH
T ss_pred eC-hHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcCCCHHHHHHH
Confidence 88 57777 67788999999999999999998764321100 00 0013578899
Q ss_pred HHhCCCEEEEEEeceeEeecccchhhHhhhCCCCCCCccc-CCCCcchhhhhcccccccccccCcccccCc
Q 012961 338 LKSMCWKIVSKKDQTVIWAKPISNSCYLKRVPGSRPPLCS-SDDDPDVTWNVLMKACISPYSAKMHHEKGT 407 (452)
Q Consensus 338 l~~~Gf~~v~~~~~~~iw~kp~~~~~~~~r~~~~~p~lc~-~~~~~~~~wy~~l~~C~~~~~~~~~~~~~~ 407 (452)
++++||+++..+.....|.+++..+....... .+.+.. .++.....|..+|..|...+..+.....+.
T Consensus 241 l~~aGf~~~~~~~~~~~y~~~~~~w~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~f~~g~~~~~~~ 309 (318)
T 2fk8_A 241 GEKAGFTVPEPLSLRPHYIKTLRIWGDTLQSN--KDKAIEVTSEEVYNRYMKYLRGCEHYFTDEMLDCSLV 309 (318)
T ss_dssp HHHTTCBCCCCEECHHHHHHHHHHHHHHHHHT--HHHHHHHSCHHHHHHHHHHHHHHHHHHHTTSCEEEEE
T ss_pred HHhCCCEEEEEEecchhHHHHHHHHHHHHHHH--HHHHHHhcChHHHHHHHHHHHHHHHHHHCCCCeEEEE
Confidence 99999999887765544444443332222111 011111 122334568889999998887765433333
No 45
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.50 E-value=1.3e-13 Score=128.73 Aligned_cols=113 Identities=19% Similarity=0.201 Sum_probs=82.4
Q ss_pred cHHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHc----C--
Q 012961 191 GADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALER----G-- 260 (452)
Q Consensus 191 ~~~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~r----g-- 260 (452)
......+.+.+.+.. .+..+|||||||+|.++..|++. .++++|+++.+ ++.|+++ +
T Consensus 13 ~~~~~~~~l~~~l~~--------~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~-----~~~a~~~~~~~~~~ 79 (219)
T 3jwg_A 13 LNQQRLGTVVAVLKS--------VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSV-----LERAKDRLKIDRLP 79 (219)
T ss_dssp HHHHHHHHHHHHHHH--------TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHH-----HHHHHHHHTGGGSC
T ss_pred chHHHHHHHHHHHhh--------cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHH-----HHHHHHHHHhhccc
Confidence 344444555555542 23458999999999999999863 45566555544 4444443 1
Q ss_pred ----CCeEEEEecCCCCCCCCCCceEEEeccccccccccH--HHHHHHHHHhcCCCcEEEEEe
Q 012961 261 ----IPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQRD--GILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 261 ----~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~~d~--~~~L~ei~RvLkPGG~lvi~~ 317 (452)
.++.+...|+..+++++++||+|+|.. +++|..++ ..+++++.++|||||.++++.
T Consensus 80 ~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~-~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~ 141 (219)
T 3jwg_A 80 EMQRKRISLFQSSLVYRDKRFSGYDAATVIE-VIEHLDENRLQAFEKVLFEFTRPQTVIVSTP 141 (219)
T ss_dssp HHHHTTEEEEECCSSSCCGGGTTCSEEEEES-CGGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred cccCcceEEEeCcccccccccCCCCEEEEHH-HHHhCCHHHHHHHHHHHHHhhCCCEEEEEcc
Confidence 168899999988888788999999888 68888765 689999999999999666554
No 46
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.50 E-value=4.2e-14 Score=131.62 Aligned_cols=129 Identities=19% Similarity=0.227 Sum_probs=96.9
Q ss_pred CCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCC---CCCC-CCceEEEecccccc
Q 012961 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRL---PYPS-RSFELAHCSRCRID 291 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~l---p~~d-~sFDlVv~s~~~l~ 291 (452)
+.+|||||||+|.++..+++. +..+.+.|+++.+++.|+++ ..+.+...+...+ ++.. ++||+|+++. +++
T Consensus 53 ~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~-~l~ 127 (227)
T 3e8s_A 53 PERVLDLGCGEGWLLRALADR---GIEAVGVDGDRTLVDAARAA-GAGEVHLASYAQLAEAKVPVGKDYDLICANF-ALL 127 (227)
T ss_dssp CSEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHT-CSSCEEECCHHHHHTTCSCCCCCEEEEEEES-CCC
T ss_pred CCEEEEeCCCCCHHHHHHHHC---CCEEEEEcCCHHHHHHHHHh-cccccchhhHHhhcccccccCCCccEEEECc-hhh
Confidence 358999999999999999876 33555566777777888777 4567777776665 5444 4599999988 566
Q ss_pred ccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChh-----------------------hHHHHHHHHHHHHhCCCEEEEE
Q 012961 292 WLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPE-----------------------NRRIWNAMYDLLKSMCWKIVSK 348 (452)
Q Consensus 292 ~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~-----------------------~~~~~~~l~~ll~~~Gf~~v~~ 348 (452)
..+...+++++.++|||||+++++++........ .....+++.++++++||+++..
T Consensus 128 -~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 206 (227)
T 3e8s_A 128 -HQDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLVSL 206 (227)
T ss_dssp -SSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEEEE
T ss_pred -hhhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEEEE
Confidence 6888899999999999999999988643221100 0013478999999999999876
Q ss_pred Ee
Q 012961 349 KD 350 (452)
Q Consensus 349 ~~ 350 (452)
..
T Consensus 207 ~~ 208 (227)
T 3e8s_A 207 QE 208 (227)
T ss_dssp EC
T ss_pred ec
Confidence 64
No 47
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.49 E-value=9.3e-14 Score=130.80 Aligned_cols=99 Identities=20% Similarity=0.256 Sum_probs=79.1
Q ss_pred CCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEecccccccc--
Q 012961 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL-- 293 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~-- 293 (452)
..+|||||||+|.++..|++. +..+.+.|+++.+++.|+++..++.+...|+..+++ +++||+|+|+..+++|.
T Consensus 41 ~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~~~~ 116 (239)
T 3bxo_A 41 ASSLLDVACGTGTHLEHFTKE---FGDTAGLELSEDMLTHARKRLPDATLHQGDMRDFRL-GRKFSAVVSMFSSVGYLKT 116 (239)
T ss_dssp CCEEEEETCTTSHHHHHHHHH---HSEEEEEESCHHHHHHHHHHCTTCEEEECCTTTCCC-SSCEEEEEECTTGGGGCCS
T ss_pred CCeEEEecccCCHHHHHHHHh---CCcEEEEeCCHHHHHHHHHhCCCCEEEECCHHHccc-CCCCcEEEEcCchHhhcCC
Confidence 458999999999999999874 113444455666667777776678999999988887 57899999877678887
Q ss_pred -ccHHHHHHHHHHhcCCCcEEEEEeC
Q 012961 294 -QRDGILLLELDRLLRPGGYFVYSSP 318 (452)
Q Consensus 294 -~d~~~~L~ei~RvLkPGG~lvi~~p 318 (452)
.+...+++++.++|+|||++++..+
T Consensus 117 ~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (239)
T 3bxo_A 117 TEELGAAVASFAEHLEPGGVVVVEPW 142 (239)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 4457799999999999999999753
No 48
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.49 E-value=1.3e-13 Score=128.74 Aligned_cols=103 Identities=18% Similarity=0.329 Sum_probs=78.5
Q ss_pred CCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEecccc-ccc
Q 012961 216 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCR-IDW 292 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~-l~~ 292 (452)
..+|||||||+|.++..++.. .++++|+++..+..+.. .+...+.++.+...|...+++++++||+|+++... +++
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~ 117 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKARE-YAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIVHFE 117 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHH-HHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGGGCC
T ss_pred CCeEEEEeccCCHHHHHHHHcCCEEEEEECCHHHHHHHHH-HHHhcCCCceEEECchhcCCCCCCcEEEEEEcCchHhCC
Confidence 458999999999999999875 45666666555443332 22233467899999999988888899999988731 334
Q ss_pred cccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012961 293 LQRDGILLLELDRLLRPGGYFVYSSPE 319 (452)
Q Consensus 293 ~~d~~~~L~ei~RvLkPGG~lvi~~p~ 319 (452)
..+...+++++.++|+|||++++..+.
T Consensus 118 ~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 118 PLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 456788999999999999999998753
No 49
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.49 E-value=5.3e-15 Score=152.18 Aligned_cols=132 Identities=12% Similarity=0.136 Sum_probs=98.6
Q ss_pred CCCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEE---EEecCCCCCCCCCCceEEEecccccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTL---GVLGTKRLPYPSRSFELAHCSRCRID 291 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~---~~~d~~~lp~~d~sFDlVv~s~~~l~ 291 (452)
+..+|||||||+|.++..|++. +..+.+.|+++.+++.|++++.+... ...+...+++++++||+|++.. +++
T Consensus 107 ~~~~VLDiGcG~G~~~~~l~~~---g~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~fD~I~~~~-vl~ 182 (416)
T 4e2x_A 107 PDPFIVEIGCNDGIMLRTIQEA---GVRHLGFEPSSGVAAKAREKGIRVRTDFFEKATADDVRRTEGPANVIYAAN-TLC 182 (416)
T ss_dssp SSCEEEEETCTTTTTHHHHHHT---TCEEEEECCCHHHHHHHHTTTCCEECSCCSHHHHHHHHHHHCCEEEEEEES-CGG
T ss_pred CCCEEEEecCCCCHHHHHHHHc---CCcEEEECCCHHHHHHHHHcCCCcceeeechhhHhhcccCCCCEEEEEECC-hHH
Confidence 4458999999999999999986 33555667777778888887655322 2233455667778999999888 788
Q ss_pred ccccHHHHHHHHHHhcCCCcEEEEEeCCC--------CC---CChhhHHHHHHHHHHHHhCCCEEEEEEe
Q 012961 292 WLQRDGILLLELDRLLRPGGYFVYSSPEA--------YA---HDPENRRIWNAMYDLLKSMCWKIVSKKD 350 (452)
Q Consensus 292 ~~~d~~~~L~ei~RvLkPGG~lvi~~p~~--------~~---~~~~~~~~~~~l~~ll~~~Gf~~v~~~~ 350 (452)
|++++..+++++.|+|||||++++..|.. +. .........+++..+++++||+++..+.
T Consensus 183 h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~~~~~~ 252 (416)
T 4e2x_A 183 HIPYVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFELVDVQR 252 (416)
T ss_dssp GCTTHHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEEEEEEE
T ss_pred hcCCHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEEEEEEE
Confidence 89999999999999999999999987641 00 0000011236899999999999988765
No 50
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.49 E-value=9.9e-14 Score=130.85 Aligned_cols=119 Identities=17% Similarity=0.281 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEec
Q 012961 192 ADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLG 269 (452)
Q Consensus 192 ~~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d 269 (452)
.+.+.+.+.+.+... ..+..+|||||||+|.++..+++. .++++|+++.++..+... ....+.++.+...|
T Consensus 20 ~~~~~~~~~~~l~~~------~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~-~~~~~~~~~~~~~d 92 (246)
T 1y8c_A 20 YKKWSDFIIEKCVEN------NLVFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENK-FRSQGLKPRLACQD 92 (246)
T ss_dssp HHHHHHHHHHHHHTT------TCCTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHH-HHHTTCCCEEECCC
T ss_pred HHHHHHHHHHHHHHh------CCCCCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHH-HhhcCCCeEEEecc
Confidence 344555566665531 113458999999999999999874 456666665555444322 22234478899999
Q ss_pred CCCCCCCCCCceEEEecccccccc---ccHHHHHHHHHHhcCCCcEEEEEeC
Q 012961 270 TKRLPYPSRSFELAHCSRCRIDWL---QRDGILLLELDRLLRPGGYFVYSSP 318 (452)
Q Consensus 270 ~~~lp~~d~sFDlVv~s~~~l~~~---~d~~~~L~ei~RvLkPGG~lvi~~p 318 (452)
...++++ ++||+|++...+++|. .+...+++++.++|+|||++++..+
T Consensus 93 ~~~~~~~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (246)
T 1y8c_A 93 ISNLNIN-RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDIN 143 (246)
T ss_dssp GGGCCCS-CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred cccCCcc-CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 9888887 8899999876357777 5668899999999999999998654
No 51
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.49 E-value=1e-13 Score=136.74 Aligned_cols=134 Identities=19% Similarity=0.133 Sum_probs=94.4
Q ss_pred CCCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHc----CCC--eEEEEecCCCCCCCCCCceEEEeccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER----GIP--STLGVLGTKRLPYPSRSFELAHCSRC 288 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~r----g~~--~~~~~~d~~~lp~~d~sFDlVv~s~~ 288 (452)
+..+|||||||+|.++..|+.....+..+.+.|+++.+++.|+++ +.. +.+..+|+..++++ ++||+|++..
T Consensus 118 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~- 195 (305)
T 3ocj_A 118 PGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR-EGYDLLTSNG- 195 (305)
T ss_dssp TTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-SCEEEEECCS-
T ss_pred CCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc-CCeEEEEECC-
Confidence 345899999999999999853211233334444455555555543 222 88999999999988 8999999877
Q ss_pred cccccccHHH---HHHHHHHhcCCCcEEEEEeCCC---------CC---CChhh------------------HHHHHHHH
Q 012961 289 RIDWLQRDGI---LLLELDRLLRPGGYFVYSSPEA---------YA---HDPEN------------------RRIWNAMY 335 (452)
Q Consensus 289 ~l~~~~d~~~---~L~ei~RvLkPGG~lvi~~p~~---------~~---~~~~~------------------~~~~~~l~ 335 (452)
+++|.+++.. +++++.++|||||+++++.... |. ..... ....+++.
T Consensus 196 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (305)
T 3ocj_A 196 LNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQTR 275 (305)
T ss_dssp SGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHHHH
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHHHH
Confidence 5777766654 7999999999999999987421 10 01100 01246889
Q ss_pred HHHHhCCCEEEEEEe
Q 012961 336 DLLKSMCWKIVSKKD 350 (452)
Q Consensus 336 ~ll~~~Gf~~v~~~~ 350 (452)
++++++||+++....
T Consensus 276 ~~l~~aGF~~v~~~~ 290 (305)
T 3ocj_A 276 AQLEEAGFTDLRFED 290 (305)
T ss_dssp HHHHHTTCEEEEEEC
T ss_pred HHHHHCCCEEEEEEc
Confidence 999999999988764
No 52
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.48 E-value=3e-13 Score=126.17 Aligned_cols=98 Identities=21% Similarity=0.264 Sum_probs=75.7
Q ss_pred CCCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHc----CC------CeEEEEecCCCCCCCCCCc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALER----GI------PSTLGVLGTKRLPYPSRSF 280 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~r----g~------~~~~~~~d~~~lp~~d~sF 280 (452)
+..+|||||||+|.++..|++. .++++|+++.+ ++.|+++ +. ++.+..+|+..++.++++|
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~-----~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~f 103 (217)
T 3jwh_A 29 NARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRS-----LEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGY 103 (217)
T ss_dssp TCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHH-----HHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSC
T ss_pred CCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHH-----HHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCc
Confidence 3458999999999999999863 45666655544 4444443 21 6889999988777777899
Q ss_pred eEEEeccccccccccH--HHHHHHHHHhcCCCcEEEEEeC
Q 012961 281 ELAHCSRCRIDWLQRD--GILLLELDRLLRPGGYFVYSSP 318 (452)
Q Consensus 281 DlVv~s~~~l~~~~d~--~~~L~ei~RvLkPGG~lvi~~p 318 (452)
|+|+|.. +++|+.++ ..+++++.++|||||+++++..
T Consensus 104 D~v~~~~-~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 104 DAATVIE-VIEHLDLSRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp SEEEEES-CGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred CEEeeHH-HHHcCCHHHHHHHHHHHHHHcCCCEEEEEccC
Confidence 9999888 68887765 7899999999999997776553
No 53
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.48 E-value=1.2e-13 Score=127.11 Aligned_cols=130 Identities=15% Similarity=0.149 Sum_probs=91.7
Q ss_pred EEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEeccccccc-cc
Q 012961 218 NVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDW-LQ 294 (452)
Q Consensus 218 ~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~-~~ 294 (452)
+|||||||+|.++..+++. .++++|+++.++..+. +.+...+.++.+...|+..+++++++||+|+++. .++ ..
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~-~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~--~~~~~~ 108 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLGYEVTAVDQSSVGLAKAK-QLAQEKGVKITTVQSNLADFDIVADAWEGIVSIF--CHLPSS 108 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTTCEEEEECSSHHHHHHHH-HHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEEC--CCCCHH
T ss_pred CEEEECCCCCHhHHHHHhCCCeEEEEECCHHHHHHHH-HHHHhcCCceEEEEcChhhcCCCcCCccEEEEEh--hcCCHH
Confidence 8999999999999999875 4555655554443333 2222235678899999998888888999999864 333 34
Q ss_pred cHHHHHHHHHHhcCCCcEEEEEeCCCCCC-----Ch---hhHHHHHHHHHHHHhCCCEEEEEEece
Q 012961 295 RDGILLLELDRLLRPGGYFVYSSPEAYAH-----DP---ENRRIWNAMYDLLKSMCWKIVSKKDQT 352 (452)
Q Consensus 295 d~~~~L~ei~RvLkPGG~lvi~~p~~~~~-----~~---~~~~~~~~l~~ll~~~Gf~~v~~~~~~ 352 (452)
+...+++++.++|+|||++++..+..... .+ .....-+++.++++ ||+++..+...
T Consensus 109 ~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--Gf~v~~~~~~~ 172 (202)
T 2kw5_A 109 LRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELP--SLNWLIANNLE 172 (202)
T ss_dssp HHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCS--SSCEEEEEEEE
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhc--CceEEEEEEEE
Confidence 56789999999999999999987542110 00 11112367888887 99998776543
No 54
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.48 E-value=4.6e-14 Score=138.33 Aligned_cols=134 Identities=8% Similarity=0.087 Sum_probs=86.0
Q ss_pred CCCEEEEECCCCchHHHHHh----h--CCC----ccccCChhhhhHHHHHHHHHcCC-CeEE--EEecCCCCC------C
Q 012961 215 NIRNVLDVGCGVASFGAYLL----S--HDI----IAMSLAPNDVHENQIQFALERGI-PSTL--GVLGTKRLP------Y 275 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La----~--~~v----~~vdis~~dis~~~~~~A~~rg~-~~~~--~~~d~~~lp------~ 275 (452)
+..+|||||||+|.++..++ . ..+ +++|+++.++..+..+.+...+. ++.+ ...+.+.++ +
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 131 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKK 131 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcccc
Confidence 44589999999997665432 2 123 56666655554433222211122 3333 344444443 5
Q ss_pred CCCCceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChh---------------hHHHHHHHHHHHHh
Q 012961 276 PSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPE---------------NRRIWNAMYDLLKS 340 (452)
Q Consensus 276 ~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~---------------~~~~~~~l~~ll~~ 340 (452)
++++||+|+++. ++||++|+..+|++++|+|||||++++..+........ ....-+++.+++++
T Consensus 132 ~~~~fD~V~~~~-~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 210 (292)
T 2aot_A 132 ELQKWDFIHMIQ-MLYYVKDIPATLKFFHSLLGTNAKMLIIVVSGSSGWDKLWKKYGSRFPQDDLCQYITSDDLTQMLDN 210 (292)
T ss_dssp CCCCEEEEEEES-CGGGCSCHHHHHHHHHHTEEEEEEEEEEEECTTSHHHHHHHHHGGGSCCCTTCCCCCHHHHHHHHHH
T ss_pred CCCceeEEEEee-eeeecCCHHHHHHHHHHHcCCCcEEEEEEecCCccHHHHHHHHHHhccCCCcccCCCHHHHHHHHHH
Confidence 678999999988 79999999999999999999999999975432100000 00012578899999
Q ss_pred CCCEEEEEE
Q 012961 341 MCWKIVSKK 349 (452)
Q Consensus 341 ~Gf~~v~~~ 349 (452)
+||+++...
T Consensus 211 aGf~~~~~~ 219 (292)
T 2aot_A 211 LGLKYECYD 219 (292)
T ss_dssp HTCCEEEEE
T ss_pred CCCceEEEE
Confidence 999877543
No 55
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.46 E-value=2.3e-13 Score=126.76 Aligned_cols=133 Identities=15% Similarity=0.242 Sum_probs=101.4
Q ss_pred CCCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCC--CCCCCCCceEEEeccccccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKR--LPYPSRSFELAHCSRCRIDW 292 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~--lp~~d~sFDlVv~s~~~l~~ 292 (452)
+..+|||||||+|.++..+++. +..+.+.|+++.+++.++++. ..+...|+.. +++++++||+|++.. +++|
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~---~~~~~~~D~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~fD~v~~~~-~l~~ 105 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKEN---GTRVSGIEAFPEAAEQAKEKL--DHVVLGDIETMDMPYEEEQFDCVIFGD-VLEH 105 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTT---TCEEEEEESSHHHHHHHHTTS--SEEEESCTTTCCCCSCTTCEEEEEEES-CGGG
T ss_pred CCCcEEEeCCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHhC--CcEEEcchhhcCCCCCCCccCEEEECC-hhhh
Confidence 4458999999999999999875 345566677777778877654 3677788766 677788999999887 6888
Q ss_pred cccHHHHHHHHHHhcCCCcEEEEEeCCCCC-------------CChh--------hHHHHHHHHHHHHhCCCEEEEEEec
Q 012961 293 LQRDGILLLELDRLLRPGGYFVYSSPEAYA-------------HDPE--------NRRIWNAMYDLLKSMCWKIVSKKDQ 351 (452)
Q Consensus 293 ~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~-------------~~~~--------~~~~~~~l~~ll~~~Gf~~v~~~~~ 351 (452)
..++..+++++.++|+|||+++++.|.... .... .....+++.++++++||+++.....
T Consensus 106 ~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 185 (230)
T 3cc8_A 106 LFDPWAVIEKVKPYIKQNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAGYSISKVDRV 185 (230)
T ss_dssp SSCHHHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred cCCHHHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHcCCeEEEEEec
Confidence 888899999999999999999998764211 0000 0012468999999999999887765
Q ss_pred ee
Q 012961 352 TV 353 (452)
Q Consensus 352 ~~ 353 (452)
..
T Consensus 186 ~~ 187 (230)
T 3cc8_A 186 YV 187 (230)
T ss_dssp EC
T ss_pred cc
Confidence 43
No 56
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.45 E-value=1.2e-13 Score=128.02 Aligned_cols=99 Identities=25% Similarity=0.374 Sum_probs=82.1
Q ss_pred CCCEEEEECCCCchHHHHHhhC-CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEecccccccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH-DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL 293 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~-~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~ 293 (452)
+..+|||||||+|.++..+ .. .++++| +++.+++.++++..++.+...|...+++++++||+|++.. +++|.
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-~~~~v~~vD-----~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l~~~ 108 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-PYPQKVGVE-----PSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFT-TLEFV 108 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-CCSEEEEEC-----CCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEES-CTTTC
T ss_pred CCCeEEEECCCCCHhHHhC-CCCeEEEEe-----CCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcC-hhhhc
Confidence 3458999999999999888 43 455555 4555566676665678889999999999889999999887 68888
Q ss_pred ccHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012961 294 QRDGILLLELDRLLRPGGYFVYSSPEA 320 (452)
Q Consensus 294 ~d~~~~L~ei~RvLkPGG~lvi~~p~~ 320 (452)
+++..+++++.++|||||+++++.+..
T Consensus 109 ~~~~~~l~~~~~~L~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 109 EDVERVLLEARRVLRPGGALVVGVLEA 135 (211)
T ss_dssp SCHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred CCHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 899999999999999999999988654
No 57
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.45 E-value=1.7e-13 Score=132.27 Aligned_cols=129 Identities=12% Similarity=0.036 Sum_probs=88.6
Q ss_pred CCCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHc----------------------CCCeEEEEecC
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALER----------------------GIPSTLGVLGT 270 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~r----------------------g~~~~~~~~d~ 270 (452)
+..+|||+|||+|..+..|++. .|+|+|++ +.+++.|+++ +.++.+.++|+
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S-----~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~ 142 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADRGHTVVGVEIS-----EIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSI 142 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHTTCEEEEECSC-----HHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCT
T ss_pred CCCeEEEeCCCCcHHHHHHHHCCCeEEEEECC-----HHHHHHHHHhcccccccccccccccccccccCCCceEEEECcc
Confidence 3458999999999999999975 35555554 4555555432 24688999999
Q ss_pred CCCCCCC-CCceEEEecccccccccc--HHHHHHHHHHhcCCCcEEEEEeCC---CCCCChhhHHHHHHHHHHHHhCCCE
Q 012961 271 KRLPYPS-RSFELAHCSRCRIDWLQR--DGILLLELDRLLRPGGYFVYSSPE---AYAHDPENRRIWNAMYDLLKSMCWK 344 (452)
Q Consensus 271 ~~lp~~d-~sFDlVv~s~~~l~~~~d--~~~~L~ei~RvLkPGG~lvi~~p~---~~~~~~~~~~~~~~l~~ll~~~Gf~ 344 (452)
..+++++ ++||+|++.. ++++++. ...+++++.|+|||||++++.+.. .....+...-.-+++.+++.. +|+
T Consensus 143 ~~l~~~~~~~FD~V~~~~-~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~g~~~~~~~~el~~~l~~-~f~ 220 (252)
T 2gb4_A 143 FDLPRANIGKFDRIWDRG-ALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAELKRLFGT-KCS 220 (252)
T ss_dssp TTGGGGCCCCEEEEEESS-STTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSCCCSSCCCCHHHHHHHHTT-TEE
T ss_pred ccCCcccCCCEEEEEEhh-hhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCccCCCCCCCCCHHHHHHHhhC-CeE
Confidence 9998764 7999999876 4555543 356999999999999999754311 000011000123578888877 598
Q ss_pred EEEEEe
Q 012961 345 IVSKKD 350 (452)
Q Consensus 345 ~v~~~~ 350 (452)
++..+.
T Consensus 221 v~~~~~ 226 (252)
T 2gb4_A 221 MQCLEE 226 (252)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 877663
No 58
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.45 E-value=4.6e-13 Score=122.29 Aligned_cols=132 Identities=17% Similarity=0.267 Sum_probs=92.6
Q ss_pred CCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHcCC-CeEEEEecCCCCCCCCCCceEEEeccccccc
Q 012961 216 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGI-PSTLGVLGTKRLPYPSRSFELAHCSRCRIDW 292 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg~-~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~ 292 (452)
..+|||||||+|.++..+++. .++++|+++..+..+.... ...+. ++.+...|...+++ +++||+|++.. +++|
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~-~l~~ 109 (199)
T 2xvm_A 33 PGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIK-SIENLDNLHTRVVDLNNLTF-DRQYDFILSTV-VLMF 109 (199)
T ss_dssp SCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-HHHTCTTEEEEECCGGGCCC-CCCEEEEEEES-CGGG
T ss_pred CCeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHH-HhCCCCCcEEEEcchhhCCC-CCCceEEEEcc-hhhh
Confidence 458999999999999999874 4666666665554444222 22343 68899999988888 78999999887 5777
Q ss_pred cc--cHHHHHHHHHHhcCCCcEEEEEeCCC---CCCChhh--HHHHHHHHHHHHhCCCEEEEEEece
Q 012961 293 LQ--RDGILLLELDRLLRPGGYFVYSSPEA---YAHDPEN--RRIWNAMYDLLKSMCWKIVSKKDQT 352 (452)
Q Consensus 293 ~~--d~~~~L~ei~RvLkPGG~lvi~~p~~---~~~~~~~--~~~~~~l~~ll~~~Gf~~v~~~~~~ 352 (452)
.. +...+++++.++|+|||++++..+.. +...... ...-+++.++++. |+++......
T Consensus 110 ~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--f~~~~~~~~~ 174 (199)
T 2xvm_A 110 LEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEG--WERVKYNEDV 174 (199)
T ss_dssp SCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTTHHHHHTTT--SEEEEEECCE
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCCCCCCCccCHHHHHHHhcC--CeEEEecccc
Confidence 65 66889999999999999988765321 1100000 0012467777776 9998876553
No 59
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.44 E-value=5.4e-13 Score=121.18 Aligned_cols=134 Identities=12% Similarity=0.047 Sum_probs=82.6
Q ss_pred CCCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHcC-CCeEEEEecCCCCC-CCCCCceEEEeccccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERG-IPSTLGVLGTKRLP-YPSRSFELAHCSRCRI 290 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg-~~~~~~~~d~~~lp-~~d~sFDlVv~s~~~l 290 (452)
+..+|||+|||+|.++..|++. .|+++|+++.++..+.... .+.+ .++.+...+...++ +.+++||+|+++...+
T Consensus 22 ~~~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~~-~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~~ 100 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQRL-SDLGIENTELILDGHENLDHYVREPIRAAIFNLGYL 100 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHH-HHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC--
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHHH-HHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCCC
Confidence 3458999999999999999874 5667777666665444322 2234 46788876666643 4468899998764333
Q ss_pred cc--------cccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEEE
Q 012961 291 DW--------LQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 349 (452)
Q Consensus 291 ~~--------~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~ 349 (452)
+. ..+...+++++.++|||||++++.................++...+...+|.+...+
T Consensus 101 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 167 (185)
T 3mti_A 101 PSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVLEYVIGLDQRVFTAMLYQ 167 (185)
T ss_dssp ---------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHHHHHHHHHSCTTTEEEEEEE
T ss_pred CCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEEEeh
Confidence 32 133356899999999999999998743322222222222333334445567776554
No 60
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.44 E-value=3.9e-13 Score=126.85 Aligned_cols=100 Identities=19% Similarity=0.312 Sum_probs=76.7
Q ss_pred CEEEEECCCCchHHHHHhhC-CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEecccccccc--
Q 012961 217 RNVLDVGCGVASFGAYLLSH-DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL-- 293 (452)
Q Consensus 217 ~~VLDIGCG~G~~~~~La~~-~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~-- 293 (452)
.+|||||||+|.++..+++. .++++|+++.++..+.. .+...+.++.+...|...++++ ++||+|++...+++|.
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~~~ 112 (243)
T 3d2l_A 35 KRIADIGCGTGTATLLLADHYEVTGVDLSEEMLEIAQE-KAMETNRHVDFWVQDMRELELP-EPVDAITILCDSLNYLQT 112 (243)
T ss_dssp CEEEEESCTTCHHHHHHTTTSEEEEEESCHHHHHHHHH-HHHHTTCCCEEEECCGGGCCCS-SCEEEEEECTTGGGGCCS
T ss_pred CeEEEecCCCCHHHHHHhhCCeEEEEECCHHHHHHHHH-hhhhcCCceEEEEcChhhcCCC-CCcCEEEEeCCchhhcCC
Confidence 58999999999999999874 55666666655544432 2223356788999999888876 7899999876457776
Q ss_pred -ccHHHHHHHHHHhcCCCcEEEEEeC
Q 012961 294 -QRDGILLLELDRLLRPGGYFVYSSP 318 (452)
Q Consensus 294 -~d~~~~L~ei~RvLkPGG~lvi~~p 318 (452)
.+...+++++.++|+|||++++..+
T Consensus 113 ~~~~~~~l~~~~~~L~pgG~l~~~~~ 138 (243)
T 3d2l_A 113 EADVKQTFDSAARLLTDGGKLLFDVH 138 (243)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEEcC
Confidence 4557799999999999999998653
No 61
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.43 E-value=3.6e-13 Score=125.30 Aligned_cols=100 Identities=22% Similarity=0.364 Sum_probs=78.8
Q ss_pred CCCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcC---CCeEEEEecCCCCCCCCCCceEEEecccccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERG---IPSTLGVLGTKRLPYPSRSFELAHCSRCRID 291 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg---~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~ 291 (452)
+..+|||||||+|.++..|++. +..+.+.|+++.+++.|+++. .++.+...|+..++ ++++||+|+|+. +++
T Consensus 51 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~-~l~ 125 (216)
T 3ofk_A 51 AVSNGLEIGCAAGAFTEKLAPH---CKRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFS-TAELFDLIVVAE-VLY 125 (216)
T ss_dssp SEEEEEEECCTTSHHHHHHGGG---EEEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCC-CSCCEEEEEEES-CGG
T ss_pred CCCcEEEEcCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCC-CCCCccEEEEcc-HHH
Confidence 4568999999999999999875 234444455555666666552 36789999998888 678999999987 688
Q ss_pred ccccH---HHHHHHHHHhcCCCcEEEEEeCC
Q 012961 292 WLQRD---GILLLELDRLLRPGGYFVYSSPE 319 (452)
Q Consensus 292 ~~~d~---~~~L~ei~RvLkPGG~lvi~~p~ 319 (452)
|+.++ ..+++++.++|||||+++++++.
T Consensus 126 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 156 (216)
T 3ofk_A 126 YLEDMTQMRTAIDNMVKMLAPGGHLVFGSAR 156 (216)
T ss_dssp GSSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred hCCCHHHHHHHHHHHHHHcCCCCEEEEEecC
Confidence 88776 46799999999999999998754
No 62
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.43 E-value=8.7e-14 Score=132.67 Aligned_cols=146 Identities=14% Similarity=0.077 Sum_probs=92.5
Q ss_pred HHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcCCCeEEEEec
Q 012961 193 DKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGIPSTLGVLG 269 (452)
Q Consensus 193 ~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d 269 (452)
..+.+.+++.+. .++.+|||||||+|..+.++++. .++++|+++.++..+. +.+...+.++.+..++
T Consensus 47 ~~~m~~~a~~~~---------~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~-~~~~~~~~~~~~~~~~ 116 (236)
T 3orh_A 47 TPYMHALAAAAS---------SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLR-DWAPRQTHKVIPLKGL 116 (236)
T ss_dssp HHHHHHHHHHHT---------TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHH-HHGGGCSSEEEEEESC
T ss_pred HHHHHHHHHhhc---------cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHH-HHHhhCCCceEEEeeh
Confidence 455566666654 24458999999999999999874 4556655554443222 2222335567777777
Q ss_pred CCCC--CCCCCCceEEEec----cccccccccHHHHHHHHHHhcCCCcEEEEEeCCC------CCCChhhHHHHHHHHHH
Q 012961 270 TKRL--PYPSRSFELAHCS----RCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEA------YAHDPENRRIWNAMYDL 337 (452)
Q Consensus 270 ~~~l--p~~d~sFDlVv~s----~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~------~~~~~~~~~~~~~l~~l 337 (452)
+..+ ++++++||.|+.- ...+++..+...+++++.|+|||||+|++..... ..+.......-+.....
T Consensus 117 a~~~~~~~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (236)
T 3orh_A 117 WEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEETQVPA 196 (236)
T ss_dssp HHHHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHHH
T ss_pred HHhhcccccccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEecCCchhhhhhhhhhhhhhhHHHHHHH
Confidence 6543 5778899999742 2235556778889999999999999999853110 00111111112345566
Q ss_pred HHhCCCEEEEE
Q 012961 338 LKSMCWKIVSK 348 (452)
Q Consensus 338 l~~~Gf~~v~~ 348 (452)
+.++||+++..
T Consensus 197 L~eaGF~~~~i 207 (236)
T 3orh_A 197 LLEAGFRRENI 207 (236)
T ss_dssp HHHHTCCGGGE
T ss_pred HHHcCCeEEEE
Confidence 77899976543
No 63
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.43 E-value=3.8e-13 Score=129.37 Aligned_cols=101 Identities=21% Similarity=0.388 Sum_probs=82.6
Q ss_pred CCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEecccccccccc
Q 012961 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQR 295 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~~d 295 (452)
..+|||||||+|.++..|++. +.++.+.|+++.+++.|+++... .+...|...+++++++||+|++...++|+..+
T Consensus 55 ~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~-~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~ 130 (260)
T 2avn_A 55 PCRVLDLGGGTGKWSLFLQER---GFEVVLVDPSKEMLEVAREKGVK-NVVEAKAEDLPFPSGAFEAVLALGDVLSYVEN 130 (260)
T ss_dssp CCEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHHTCS-CEEECCTTSCCSCTTCEEEEEECSSHHHHCSC
T ss_pred CCeEEEeCCCcCHHHHHHHHc---CCeEEEEeCCHHHHHHHHhhcCC-CEEECcHHHCCCCCCCEEEEEEcchhhhcccc
Confidence 458999999999999999875 33455556667777777776543 37888999999988999999998766777688
Q ss_pred HHHHHHHHHHhcCCCcEEEEEeCCC
Q 012961 296 DGILLLELDRLLRPGGYFVYSSPEA 320 (452)
Q Consensus 296 ~~~~L~ei~RvLkPGG~lvi~~p~~ 320 (452)
...+++++.++|||||++++..+..
T Consensus 131 ~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 131 KDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred HHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 8999999999999999999988654
No 64
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.42 E-value=3.3e-13 Score=125.60 Aligned_cols=110 Identities=21% Similarity=0.282 Sum_probs=89.9
Q ss_pred CCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEecccccccccc
Q 012961 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQR 295 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~~d 295 (452)
..+|||||||+|.++..++ ..++++|+++. ++.+..+|+..+++++++||+|++.. ++|+ .+
T Consensus 68 ~~~vLDiG~G~G~~~~~l~-~~v~~~D~s~~---------------~~~~~~~d~~~~~~~~~~fD~v~~~~-~l~~-~~ 129 (215)
T 2zfu_A 68 SLVVADFGCGDCRLASSIR-NPVHCFDLASL---------------DPRVTVCDMAQVPLEDESVDVAVFCL-SLMG-TN 129 (215)
T ss_dssp TSCEEEETCTTCHHHHHCC-SCEEEEESSCS---------------STTEEESCTTSCSCCTTCEEEEEEES-CCCS-SC
T ss_pred CCeEEEECCcCCHHHHHhh-ccEEEEeCCCC---------------CceEEEeccccCCCCCCCEeEEEEeh-hccc-cC
Confidence 3579999999999999885 56888888765 45678889988999889999999988 4664 78
Q ss_pred HHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEEE
Q 012961 296 DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 349 (452)
Q Consensus 296 ~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~ 349 (452)
...+++++.++|+|||+++++.+..... ..+++.++++++||+++...
T Consensus 130 ~~~~l~~~~~~L~~gG~l~i~~~~~~~~------~~~~~~~~l~~~Gf~~~~~~ 177 (215)
T 2zfu_A 130 IRDFLEEANRVLKPGGLLKVAEVSSRFE------DVRTFLRAVTKLGFKIVSKD 177 (215)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEECGGGCS------CHHHHHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHHHhCCCCeEEEEEEcCCCCC------CHHHHHHHHHHCCCEEEEEe
Confidence 8899999999999999999987543211 24678899999999988754
No 65
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.42 E-value=3.1e-13 Score=131.45 Aligned_cols=139 Identities=18% Similarity=0.248 Sum_probs=98.5
Q ss_pred CCCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcCC--CeEEEEecCCCCCC-CCCCceEEEeccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPY-PSRSFELAHCSRC 288 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg~--~~~~~~~d~~~lp~-~d~sFDlVv~s~~ 288 (452)
+..+|||||||+|.++..++.. .++++|+++.++..+.. .+...+. ++.+..+|+..+++ ++++||+|++..
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~-~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~- 141 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARV-RARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQF- 141 (298)
T ss_dssp TTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHH-HHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEES-
T ss_pred CCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHH-HHHhcCCCccEEEEECCccccccCCCCCcCEEEECc-
Confidence 3458999999999999888763 46666666555543332 2222232 47888999998888 578999999987
Q ss_pred cccc----cccHHHHHHHHHHhcCCCcEEEEEeCCCCC-----------------------CChh---------------
Q 012961 289 RIDW----LQRDGILLLELDRLLRPGGYFVYSSPEAYA-----------------------HDPE--------------- 326 (452)
Q Consensus 289 ~l~~----~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~-----------------------~~~~--------------- 326 (452)
++|+ ..+...+++++.++|||||++++..+.... ..+.
T Consensus 142 ~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~ 221 (298)
T 1ri5_A 142 SFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDVILERYKQGRMSNDFYKIELEKMEDVPMESVREYRFTLLDSVN 221 (298)
T ss_dssp CGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEEEEETTSCS
T ss_pred hhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHccCccCCeeEEEEeCccccccccccceEEEEEchhhc
Confidence 4665 456678999999999999999998764210 0000
Q ss_pred ----hHHHHHHHHHHHHhCCCEEEEEEeceeEe
Q 012961 327 ----NRRIWNAMYDLLKSMCWKIVSKKDQTVIW 355 (452)
Q Consensus 327 ----~~~~~~~l~~ll~~~Gf~~v~~~~~~~iw 355 (452)
.....+++.++++++||+++........+
T Consensus 222 ~~~~~~~~~~~l~~ll~~aGf~~v~~~~~~~~~ 254 (298)
T 1ri5_A 222 NCIEYFVDFTRMVDGFKRLGLSLVERKGFIDFY 254 (298)
T ss_dssp SEEEECCCHHHHHHHHHTTTEEEEEEEEHHHHH
T ss_pred CCcccccCHHHHHHHHHHcCCEEEEecCHHHHH
Confidence 00123789999999999999887665443
No 66
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.42 E-value=1.4e-13 Score=136.49 Aligned_cols=138 Identities=12% Similarity=0.119 Sum_probs=93.7
Q ss_pred CCEEEEECCCCchHHHHHhh---CCCccccCChhhhhHHHHHHHHHcCCC-------eEEEEecC------CCC--CCCC
Q 012961 216 IRNVLDVGCGVASFGAYLLS---HDIIAMSLAPNDVHENQIQFALERGIP-------STLGVLGT------KRL--PYPS 277 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~---~~v~~vdis~~dis~~~~~~A~~rg~~-------~~~~~~d~------~~l--p~~d 277 (452)
..+|||||||+|..+..++. ..|+|+|+++.++..+.... .+.+.. +.+.+.+. ..+ ++++
T Consensus 49 ~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~-~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERY-NKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp CCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHH-HHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHH-HhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 46899999999976655543 24777777777766555332 222322 45667766 322 3567
Q ss_pred CCceEEEecccccccc---ccHHHHHHHHHHhcCCCcEEEEEeCCCCC--------------------------------
Q 012961 278 RSFELAHCSRCRIDWL---QRDGILLLELDRLLRPGGYFVYSSPEAYA-------------------------------- 322 (452)
Q Consensus 278 ~sFDlVv~s~~~l~~~---~d~~~~L~ei~RvLkPGG~lvi~~p~~~~-------------------------------- 322 (452)
++||+|+|.+ ++||. .+...+++++.|+|||||+|+++++....
T Consensus 128 ~~FD~V~~~~-~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 206 (302)
T 2vdw_A 128 GKFNIIDWQF-AIHYSFHPRHYATVMNNLSELTASGGKVLITTMDGDKLSKLTDKKTFIIHKNLPSSENYMSVEKIADDR 206 (302)
T ss_dssp SCEEEEEEES-CGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECHHHHTTCCSCEEEECCSSSCTTTSEEEECEEETTE
T ss_pred CCeeEEEECc-hHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHhcCCcccccccccccceeeeccccccc
Confidence 8999999988 57764 34578999999999999999998763100
Q ss_pred ---CChhh--------HHHHHHHHHHHHhCCCEEEEEEeceeEe
Q 012961 323 ---HDPEN--------RRIWNAMYDLLKSMCWKIVSKKDQTVIW 355 (452)
Q Consensus 323 ---~~~~~--------~~~~~~l~~ll~~~Gf~~v~~~~~~~iw 355 (452)
..+.. .-.++++..+++++||+++.......+|
T Consensus 207 ~~~~~~~~~~~~~~e~~v~~~el~~l~~~~Gl~lv~~~~f~~~~ 250 (302)
T 2vdw_A 207 IVVYNPSTMSTPMTEYIIKKNDIVRVFNEYGFVLVDNVDFATII 250 (302)
T ss_dssp EEEBCTTTBSSCEEEECCCHHHHHHHHHHTTEEEEEEEEHHHHH
T ss_pred cceeeccccCCCceeeeeEHHHHHHHHHHCCCEEEEecChHHHH
Confidence 00110 1124789999999999999887765443
No 67
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.41 E-value=4.9e-13 Score=131.24 Aligned_cols=98 Identities=12% Similarity=0.207 Sum_probs=77.7
Q ss_pred CCCEEEEECCCCchHHHHHhh-----CCCccccCChhhhhHHHHHHHHHc---CCCeEEEEecCCCCCCCC------CCc
Q 012961 215 NIRNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALER---GIPSTLGVLGTKRLPYPS------RSF 280 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~-----~~v~~vdis~~dis~~~~~~A~~r---g~~~~~~~~d~~~lp~~d------~sF 280 (452)
+..+|||||||+|.++..|++ ..|+++|+++.++..+.... ... ..++.+.++|+..+++++ ++|
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 114 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIK-EGSPDTYKNVSFKISSSDDFKFLGADSVDKQKI 114 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHH-HHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHH-HhccCCCCceEEEEcCHHhCCccccccccCCCe
Confidence 456899999999999999984 24566666555554443222 222 457899999999998877 899
Q ss_pred eEEEeccccccccccHHHHHHHHHHhcCCCcEEEE
Q 012961 281 ELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVY 315 (452)
Q Consensus 281 DlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi 315 (452)
|+|+++. ++||. +...+++++.++|||||.+++
T Consensus 115 D~V~~~~-~l~~~-~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 115 DMITAVE-CAHWF-DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp EEEEEES-CGGGS-CHHHHHHHHHHHEEEEEEEEE
T ss_pred eEEeHhh-HHHHh-CHHHHHHHHHHhcCCCcEEEE
Confidence 9999988 68888 999999999999999999998
No 68
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.41 E-value=2e-13 Score=133.04 Aligned_cols=119 Identities=18% Similarity=0.223 Sum_probs=84.9
Q ss_pred HHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHc----CCCeEEE
Q 012961 193 DKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALER----GIPSTLG 266 (452)
Q Consensus 193 ~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~r----g~~~~~~ 266 (452)
..+.+.+.+.+.. .+..+|||||||+|.++..|++. .|+++|+++.++..+..+..... ..++.+.
T Consensus 43 ~~~~~~l~~~l~~--------~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~ 114 (293)
T 3thr_A 43 AEYKAWLLGLLRQ--------HGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIE 114 (293)
T ss_dssp HHHHHHHHHHHHH--------TTCCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEE
T ss_pred HHHHHHHHHHhcc--------cCCCEEEEecCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHhhhhcccccccceeeEe
Confidence 4555556555542 13458999999999999999875 45556555544433332211111 1346778
Q ss_pred EecCCCCC---CCCCCceEEEecccccccccc-------HHHHHHHHHHhcCCCcEEEEEeCC
Q 012961 267 VLGTKRLP---YPSRSFELAHCSRCRIDWLQR-------DGILLLELDRLLRPGGYFVYSSPE 319 (452)
Q Consensus 267 ~~d~~~lp---~~d~sFDlVv~s~~~l~~~~d-------~~~~L~ei~RvLkPGG~lvi~~p~ 319 (452)
..|...++ +++++||+|+|...+++|+.+ ...+++++.++|||||++++..+.
T Consensus 115 ~~d~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 115 EANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp ECCGGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred ecChhhCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 88888877 788999999997236888888 788999999999999999998753
No 69
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.41 E-value=1.3e-13 Score=133.21 Aligned_cols=135 Identities=13% Similarity=0.101 Sum_probs=89.8
Q ss_pred CCCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcC------------------------------C
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERG------------------------------I 261 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg------------------------------~ 261 (452)
+..+|||||||+|.++..++.. .|+++|+++.++..+.... +... .
T Consensus 55 ~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~-~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (263)
T 2a14_A 55 QGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWL-KKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRA 133 (263)
T ss_dssp CEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHH-HTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHH
T ss_pred CCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHH-hcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHh
Confidence 4458999999999887766542 4778877777665543221 1110 0
Q ss_pred CeE-EEEecCCC-CCC---CCCCceEEEecccccccc----ccHHHHHHHHHHhcCCCcEEEEEeCCC---CCCChhh--
Q 012961 262 PST-LGVLGTKR-LPY---PSRSFELAHCSRCRIDWL----QRDGILLLELDRLLRPGGYFVYSSPEA---YAHDPEN-- 327 (452)
Q Consensus 262 ~~~-~~~~d~~~-lp~---~d~sFDlVv~s~~~l~~~----~d~~~~L~ei~RvLkPGG~lvi~~p~~---~~~~~~~-- 327 (452)
.+. +.++|+.. .|+ ..++||+|+++.+ +|++ ++...++++++|+|||||+|+++.... +......
T Consensus 134 ~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~-l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~~g~~~~~ 212 (263)
T 2a14_A 134 AVKRVLKCDVHLGNPLAPAVLPLADCVLTLLA-MECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYMVGKREFS 212 (263)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEEESC-HHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEEEE
T ss_pred hhheEEeccccCCCCCCccccCCCCEeeehHH-HHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccceeCCeEee
Confidence 122 77888766 343 2578999999984 6653 455679999999999999999986321 1000000
Q ss_pred --HHHHHHHHHHHHhCCCEEEEEEec
Q 012961 328 --RRIWNAMYDLLKSMCWKIVSKKDQ 351 (452)
Q Consensus 328 --~~~~~~l~~ll~~~Gf~~v~~~~~ 351 (452)
.-.-+++.++++++||+++.....
T Consensus 213 ~~~~~~~~l~~~l~~aGF~i~~~~~~ 238 (263)
T 2a14_A 213 CVALEKGEVEQAVLDAGFDIEQLLHS 238 (263)
T ss_dssp CCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred ccccCHHHHHHHHHHCCCEEEEEeec
Confidence 002357899999999998876643
No 70
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.40 E-value=1.6e-12 Score=125.43 Aligned_cols=135 Identities=10% Similarity=0.121 Sum_probs=95.3
Q ss_pred CCCEEEEECCCCchHHHHHhh-----CCCccccCChh------hhhHHHHHHHHHcC--CCeEEEEec---CCCCCCCCC
Q 012961 215 NIRNVLDVGCGVASFGAYLLS-----HDIIAMSLAPN------DVHENQIQFALERG--IPSTLGVLG---TKRLPYPSR 278 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~-----~~v~~vdis~~------dis~~~~~~A~~rg--~~~~~~~~d---~~~lp~~d~ 278 (452)
+..+|||||||+|.++..+++ ..++++|+++. ++..+. +.....+ .++.+...| ...+|++++
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~-~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 121 (275)
T 3bkx_A 43 PGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAW-NHLLAGPLGDRLTVHFNTNLSDDLGPIADQ 121 (275)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHH-HHHHTSTTGGGEEEECSCCTTTCCGGGTTC
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHH-HHHHhcCCCCceEEEECChhhhccCCCCCC
Confidence 445899999999999998875 35778888775 454333 2233333 357888887 556677888
Q ss_pred CceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhh--------------------------HHHHH
Q 012961 279 SFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPEN--------------------------RRIWN 332 (452)
Q Consensus 279 sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~--------------------------~~~~~ 332 (452)
+||+|++.. +++|..++..+++.+.++++|||++++............ ...-+
T Consensus 122 ~fD~v~~~~-~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 200 (275)
T 3bkx_A 122 HFDRVVLAH-SLWYFASANALALLFKNMAAVCDHVDVAEWSMQPTALDQIGHLQAAMIQGLLYAIAPSDVANIRTLITPD 200 (275)
T ss_dssp CCSEEEEES-CGGGSSCHHHHHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHHHHHHHHHHHHHHSCCTTCSCCCCCCHH
T ss_pred CEEEEEEcc-chhhCCCHHHHHHHHHHHhCCCCEEEEEEecCCCCchhhhhHHHHHHHHHHHhhccccccccccccCCHH
Confidence 999999888 678888888777778888888999999764321111100 01124
Q ss_pred HHHHHHHhCCCEEEEEEec
Q 012961 333 AMYDLLKSMCWKIVSKKDQ 351 (452)
Q Consensus 333 ~l~~ll~~~Gf~~v~~~~~ 351 (452)
++.++++++||+++.....
T Consensus 201 ~l~~~l~~aGf~~~~~~~~ 219 (275)
T 3bkx_A 201 TLAQIAHDNTWTYTAGTIV 219 (275)
T ss_dssp HHHHHHHHHTCEEEECCCB
T ss_pred HHHHHHHHCCCeeEEEEEe
Confidence 7889999999999876654
No 71
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.40 E-value=3.2e-12 Score=119.32 Aligned_cols=125 Identities=13% Similarity=0.128 Sum_probs=91.9
Q ss_pred CCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHcC-CCeEEEEecCCCCC--CCCCCceEEEeccc
Q 012961 216 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERG-IPSTLGVLGTKRLP--YPSRSFELAHCSRC 288 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg-~~~~~~~~d~~~lp--~~d~sFDlVv~s~~ 288 (452)
..+|||||||+|.++..++.. .++++|+++..+..+..+. ...+ .++.+..+|+..++ +++++||+|++..
T Consensus 42 ~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~-~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~- 119 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKV-LEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNF- 119 (214)
T ss_dssp CCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHH-HHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEES-
T ss_pred CCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHH-HHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEEC-
Confidence 458999999999999998863 5777777776665554333 2334 46889999988877 7778999999876
Q ss_pred cccccc--------cHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEEEe
Q 012961 289 RIDWLQ--------RDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKD 350 (452)
Q Consensus 289 ~l~~~~--------d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~ 350 (452)
..+|.. ....++.++.++|+|||.+++..... ...+.+.+++++.||..+....
T Consensus 120 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~--------~~~~~~~~~~~~~g~~~~~~~~ 181 (214)
T 1yzh_A 120 SDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNR--------GLFEYSLVSFSQYGMKLNGVWL 181 (214)
T ss_dssp CCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCH--------HHHHHHHHHHHHHTCEEEEEES
T ss_pred CCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCH--------HHHHHHHHHHHHCCCeeeeccc
Confidence 343322 12579999999999999999976321 2346777888889999876654
No 72
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.40 E-value=1.6e-13 Score=134.04 Aligned_cols=136 Identities=15% Similarity=0.159 Sum_probs=88.1
Q ss_pred CCCEEEEECCCCchHHHHHhh---CCCccccCChhhhhHHHHHHH----------------HHcC--------------C
Q 012961 215 NIRNVLDVGCGVASFGAYLLS---HDIIAMSLAPNDVHENQIQFA----------------LERG--------------I 261 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~---~~v~~vdis~~dis~~~~~~A----------------~~rg--------------~ 261 (452)
+..+|||||||+|.++..++. ..|+++|+++.++..+..... ...+ .
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 150 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRAR 150 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhh
Confidence 345899999999995544433 356777776665543332110 0011 0
Q ss_pred CeEEEEecCCC-CCC-----CCCCceEEEeccccccc----cccHHHHHHHHHHhcCCCcEEEEEeCC--C-CCCChh--
Q 012961 262 PSTLGVLGTKR-LPY-----PSRSFELAHCSRCRIDW----LQRDGILLLELDRLLRPGGYFVYSSPE--A-YAHDPE-- 326 (452)
Q Consensus 262 ~~~~~~~d~~~-lp~-----~d~sFDlVv~s~~~l~~----~~d~~~~L~ei~RvLkPGG~lvi~~p~--~-~~~~~~-- 326 (452)
...+..+|+.. +|+ ++++||+|+|+. +++| .++...+|+++.|+|||||+|++.... . +.....
T Consensus 151 ~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~-~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~~ 229 (289)
T 2g72_A 151 VKRVLPIDVHQPQPLGAGSPAPLPADALVSAF-CLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARL 229 (289)
T ss_dssp EEEEECCCTTSSSTTCSSCSSCSSEEEEEEES-CHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEEE
T ss_pred hceEEecccCCCCCccccccCCCCCCEEEehh-hhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCeee
Confidence 13466668776 664 346799999988 5777 567788999999999999999997421 1 100000
Q ss_pred --hHHHHHHHHHHHHhCCCEEEEEEec
Q 012961 327 --NRRIWNAMYDLLKSMCWKIVSKKDQ 351 (452)
Q Consensus 327 --~~~~~~~l~~ll~~~Gf~~v~~~~~ 351 (452)
....-+++.++++++||+++.....
T Consensus 230 ~~~~~~~~~l~~~l~~aGf~~~~~~~~ 256 (289)
T 2g72_A 230 TVVPVSEEEVREALVRSGYKVRDLRTY 256 (289)
T ss_dssp ECCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred eeccCCHHHHHHHHHHcCCeEEEeeEe
Confidence 0012367899999999999876643
No 73
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.39 E-value=8.8e-13 Score=124.27 Aligned_cols=119 Identities=22% Similarity=0.319 Sum_probs=92.2
Q ss_pred CCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecC-CCCCCC-CCCceEEEecccccccc
Q 012961 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGT-KRLPYP-SRSFELAHCSRCRIDWL 293 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~-~~lp~~-d~sFDlVv~s~~~l~~~ 293 (452)
..+|||||||+|.++..|++. +..+.+.|+++.+++.++++..++.+.+.|. ..+|++ +++||+|+++
T Consensus 49 ~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~------- 118 (226)
T 3m33_A 49 QTRVLEAGCGHGPDAARFGPQ---AARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR------- 118 (226)
T ss_dssp TCEEEEESCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE-------
T ss_pred CCeEEEeCCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeC-------
Confidence 458999999999999999985 3345555667777788877777899999998 678888 8999999976
Q ss_pred ccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEEEecee
Q 012961 294 QRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKDQTV 353 (452)
Q Consensus 294 ~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~~~~ 353 (452)
.+...+++++.++|||||.++...... ..+.+.+.++++||..+.......
T Consensus 119 ~~~~~~l~~~~~~LkpgG~l~~~~~~~---------~~~~~~~~l~~~Gf~~~~~~~~~~ 169 (226)
T 3m33_A 119 RGPTSVILRLPELAAPDAHFLYVGPRL---------NVPEVPERLAAVGWDIVAEDHVSV 169 (226)
T ss_dssp SCCSGGGGGHHHHEEEEEEEEEEESSS---------CCTHHHHHHHHTTCEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHcCCCcEEEEeCCcC---------CHHHHHHHHHHCCCeEEEEEeeee
Confidence 244568999999999999999322111 124678889999999887765543
No 74
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.39 E-value=1.9e-12 Score=124.72 Aligned_cols=166 Identities=9% Similarity=0.053 Sum_probs=104.7
Q ss_pred CCCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcCC--CeEEEEecCCCCC--CCCCCceEEEecc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLP--YPSRSFELAHCSR 287 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg~--~~~~~~~d~~~lp--~~d~sFDlVv~s~ 287 (452)
+..+|||+|||+|.++..+++. .|+++|+++..+..+..+. ...+. ++.+..+|+..++ +++++||+|+++.
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~-~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~np 127 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSV-AYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNP 127 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHH-HHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECC
T ss_pred CCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHH-HHCCCcccEEEEECcHHHhhhhhccCCccEEEECC
Confidence 3458999999999999999874 4667766666554444222 22333 4888999987765 5578999999863
Q ss_pred ccccc-------------------cccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEE
Q 012961 288 CRIDW-------------------LQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSK 348 (452)
Q Consensus 288 ~~l~~-------------------~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~ 348 (452)
..+.. ..+...+++++.++|||||++++..+... ..++...+++.||.....
T Consensus 128 Py~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~---------~~~~~~~l~~~~~~~~~~ 198 (259)
T 3lpm_A 128 PYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPER---------LLDIIDIMRKYRLEPKRI 198 (259)
T ss_dssp CC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTTT---------HHHHHHHHHHTTEEEEEE
T ss_pred CCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHHH---------HHHHHHHHHHCCCceEEE
Confidence 21111 02235699999999999999999765432 456788889999988765
Q ss_pred EeceeEeecccchhhHhhhCCCC-----CCCcccC-CCCcchhhhhcc
Q 012961 349 KDQTVIWAKPISNSCYLKRVPGS-----RPPLCSS-DDDPDVTWNVLM 390 (452)
Q Consensus 349 ~~~~~iw~kp~~~~~~~~r~~~~-----~p~lc~~-~~~~~~~wy~~l 390 (452)
......-.++........++.+. .|+|+.. .+..++.|+..|
T Consensus 199 ~~v~~~~~~~~~~~l~~~~k~~~~~~~~~~~l~i~~~~g~yt~~~~~~ 246 (259)
T 3lpm_A 199 QFVHPRSDREANTVLVEGIKDGKPGVKYVPPVIVYDELGEYTPVIKEI 246 (259)
T ss_dssp EEEESSTTSCCSEEEEEEEETCCSCCEEEEEEECBCTTSSBCHHHHHH
T ss_pred EEeecCCCCCcEEEEEEEEeCCCCCCeecCCEEEECCCCCcCHHHHHH
Confidence 54322122222222222222211 2445543 345677777655
No 75
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.39 E-value=5e-13 Score=126.68 Aligned_cols=140 Identities=15% Similarity=0.119 Sum_probs=90.9
Q ss_pred HHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHc----CCCeE
Q 012961 192 ADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALER----GIPST 264 (452)
Q Consensus 192 ~~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~r----g~~~~ 264 (452)
...+.+.+...+. .+..+|||||||+|.++..|++. .++++|+++. +++.|+++ +.++.
T Consensus 46 ~~~~~~~l~~~~~---------~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~-----~l~~a~~~~~~~~~~v~ 111 (236)
T 1zx0_A 46 ETPYMHALAAAAS---------SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDG-----VFQRLRDWAPRQTHKVI 111 (236)
T ss_dssp GHHHHHHHHHHHT---------TTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHH-----HHHHHHHHGGGCSSEEE
T ss_pred HHHHHHHHHhhcC---------CCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHH-----HHHHHHHHHHhcCCCeE
Confidence 3455555555443 23458999999999999999763 4556655554 44554443 45688
Q ss_pred EEEecCCCC--CCCCCCceEEEe-cccc-ccc--cccHHHHHHHHHHhcCCCcEEEEEeCCCCC-----CChhhHHHH-H
Q 012961 265 LGVLGTKRL--PYPSRSFELAHC-SRCR-IDW--LQRDGILLLELDRLLRPGGYFVYSSPEAYA-----HDPENRRIW-N 332 (452)
Q Consensus 265 ~~~~d~~~l--p~~d~sFDlVv~-s~~~-l~~--~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~-----~~~~~~~~~-~ 332 (452)
+..+|..++ ++++++||+|++ .+.. .+. ..+...+++++.|+|||||+|++.....+. ........+ +
T Consensus 112 ~~~~d~~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (236)
T 1zx0_A 112 PLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGELMKSKYSDITIMFEE 191 (236)
T ss_dssp EEESCHHHHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHHHHTTTTCSCHHHHHHH
T ss_pred EEecCHHHhhcccCCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecCcHHHhhchhhhhhhhhccH
Confidence 889998888 888899999998 4432 111 223346899999999999999986532110 001111112 3
Q ss_pred HHHHHHHhCCCEE
Q 012961 333 AMYDLLKSMCWKI 345 (452)
Q Consensus 333 ~l~~ll~~~Gf~~ 345 (452)
.....+.++||+.
T Consensus 192 ~~~~~l~~aGF~~ 204 (236)
T 1zx0_A 192 TQVPALLEAGFRR 204 (236)
T ss_dssp HTHHHHHHTTCCG
T ss_pred HHHHHHHHCCCCC
Confidence 4456788899974
No 76
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.39 E-value=1.2e-12 Score=128.53 Aligned_cols=129 Identities=16% Similarity=0.248 Sum_probs=89.2
Q ss_pred CCCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHcC------------------------------
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERG------------------------------ 260 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg------------------------------ 260 (452)
...+|||||||+|.++..|+.. .|+++|+++.++ +.|+++.
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i-----~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLI-----HSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTV 120 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHH-----HHHHHTC------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHH-----HHHHHHHHhhhhhhccccccccccccccccccccccc
Confidence 3458999999999999999863 456666655544 4444331
Q ss_pred ---------------------------------CCeEEEEecCCCCC-----CCCCCceEEEeccccccccc------cH
Q 012961 261 ---------------------------------IPSTLGVLGTKRLP-----YPSRSFELAHCSRCRIDWLQ------RD 296 (452)
Q Consensus 261 ---------------------------------~~~~~~~~d~~~lp-----~~d~sFDlVv~s~~~l~~~~------d~ 296 (452)
.++.+..+|....+ +.+++||+|+|.. +++|+. +.
T Consensus 121 ~~~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~-vl~~ihl~~~~~~~ 199 (292)
T 3g07_A 121 RKRSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLS-LTKWVHLNWGDEGL 199 (292)
T ss_dssp ---------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEES-CHHHHHHHHHHHHH
T ss_pred cccccccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEECh-HHHHhhhcCCHHHH
Confidence 25788888876543 5678999999987 565653 55
Q ss_pred HHHHHHHHHhcCCCcEEEEEeCCC--CCC----ChhhHHHH-------HHHHHHHHh--CCCEEEEEE
Q 012961 297 GILLLELDRLLRPGGYFVYSSPEA--YAH----DPENRRIW-------NAMYDLLKS--MCWKIVSKK 349 (452)
Q Consensus 297 ~~~L~ei~RvLkPGG~lvi~~p~~--~~~----~~~~~~~~-------~~l~~ll~~--~Gf~~v~~~ 349 (452)
..++++++++|+|||+|++...+. |.. .......+ +++.+++.+ +||+.++..
T Consensus 200 ~~~l~~~~~~LkpGG~lil~~~~~~~y~~~~~~~~~~~~~~~~~~~~p~~~~~~L~~~~~GF~~~~~~ 267 (292)
T 3g07_A 200 KRMFRRIYRHLRPGGILVLEPQPWSSYGKRKTLTETIYKNYYRIQLKPEQFSSYLTSPDVGFSSYELV 267 (292)
T ss_dssp HHHHHHHHHHEEEEEEEEEECCCHHHHHTTTTSCHHHHHHHHHCCCCGGGHHHHHTSTTTCCCEEEEC
T ss_pred HHHHHHHHHHhCCCcEEEEecCCchhhhhhhcccHHHHhhhhcEEEcHHHHHHHHHhcCCCceEEEEe
Confidence 779999999999999999976432 111 11111122 367888888 999776554
No 77
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.38 E-value=8.1e-13 Score=135.12 Aligned_cols=132 Identities=17% Similarity=0.178 Sum_probs=91.4
Q ss_pred CCCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEeccccccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDW 292 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~ 292 (452)
+..+|||+|||+|.++..+++. .|+++|+++.++..+. +.+...+.++.+...|....+.++++||+|+++. .+|+
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~al~~A~-~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~np-p~~~ 310 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQ-KGLEANALKAQALHSDVDEALTEEARFDIIVTNP-PFHV 310 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHTTCEEEEEESBHHHHHHHH-HHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECC-CCCT
T ss_pred CCCEEEEEeeeCCHHHHHHHHcCCEEEEEECCHHHHHHHH-HHHHHcCCCeEEEEcchhhccccCCCeEEEEECC-chhh
Confidence 3458999999999999999875 4566666655554443 2233345678899999988877778999999876 4665
Q ss_pred -----cccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEEE
Q 012961 293 -----LQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 349 (452)
Q Consensus 293 -----~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~ 349 (452)
..+...+++++.++|||||.++++.+............+..++.+ ++.||+++...
T Consensus 311 ~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l~~~~~l~~~f~~v~~l-~~~gF~Vl~a~ 371 (381)
T 3dmg_A 311 GGAVILDVAQAFVNVAAARLRPGGVFFLVSNPFLKYEPLLEEKFGAFQTL-KVAEYKVLFAE 371 (381)
T ss_dssp TCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTTSCHHHHHHHHHSCCEEE-EESSSEEEEEE
T ss_pred cccccHHHHHHHHHHHHHhcCcCcEEEEEEcCCCChHHHHHHhhccEEEE-eCCCEEEEEEE
Confidence 445577999999999999999998866542222222223333333 56667666544
No 78
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.38 E-value=1.2e-12 Score=120.72 Aligned_cols=99 Identities=21% Similarity=0.347 Sum_probs=76.8
Q ss_pred CCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcC---CCeEEEEecCCCCCCCCCCceEEEecccc
Q 012961 216 IRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERG---IPSTLGVLGTKRLPYPSRSFELAHCSRCR 289 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg---~~~~~~~~d~~~lp~~d~sFDlVv~s~~~ 289 (452)
..+|||||||+|.++..+++. .++++| +++.+++.++++. .++.+.+.|...+++++++||+|++.. +
T Consensus 43 ~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D-----~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~-~ 116 (215)
T 2pxx_A 43 EDRILVLGCGNSALSYELFLGGFPNVTSVD-----YSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLEKG-T 116 (215)
T ss_dssp TCCEEEETCTTCSHHHHHHHTTCCCEEEEE-----SCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEEEEES-H
T ss_pred CCeEEEECCCCcHHHHHHHHcCCCcEEEEe-----CCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEEEECc-c
Confidence 347999999999999999875 455555 4555555555543 468889999999998889999999876 3
Q ss_pred cccc---------------ccHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012961 290 IDWL---------------QRDGILLLELDRLLRPGGYFVYSSPEA 320 (452)
Q Consensus 290 l~~~---------------~d~~~~L~ei~RvLkPGG~lvi~~p~~ 320 (452)
+++. .+...+++++.++|||||.+++.++..
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 117 LDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp HHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred hhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 4332 355779999999999999999988653
No 79
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.37 E-value=3.4e-13 Score=128.92 Aligned_cols=131 Identities=15% Similarity=0.156 Sum_probs=91.1
Q ss_pred CCCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcC--CC---------------------------
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERG--IP--------------------------- 262 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg--~~--------------------------- 262 (452)
+..+|||||||+|.++..++.. .|+++|+++.++ +.|+++. ..
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l-----~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNL-----WELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEE 130 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHH-----HHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHH-----HHHHHHHhcCCccccchhhhhhhhcccccccchHHHHH
Confidence 4458999999999999888764 456666555544 4443321 11
Q ss_pred -----e-EEEEecCCCCC-CCC---CCceEEEecccccc----ccccHHHHHHHHHHhcCCCcEEEEEeCCCCCC---Ch
Q 012961 263 -----S-TLGVLGTKRLP-YPS---RSFELAHCSRCRID----WLQRDGILLLELDRLLRPGGYFVYSSPEAYAH---DP 325 (452)
Q Consensus 263 -----~-~~~~~d~~~lp-~~d---~sFDlVv~s~~~l~----~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~---~~ 325 (452)
+ .+..+|+...+ +++ ++||+|+|.. +++ +..+...+++++.++|||||+|++..+..... ..
T Consensus 131 ~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~-~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~ 209 (265)
T 2i62_A 131 KLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTL-CLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGE 209 (265)
T ss_dssp HHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEES-CHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETT
T ss_pred HhhhhheeEEEeeeccCCCCCccccCCccEEEEhh-hhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCC
Confidence 5 78888887764 355 7899999988 566 45567889999999999999999987432100 00
Q ss_pred h--h--HHHHHHHHHHHHhCCCEEEEEEec
Q 012961 326 E--N--RRIWNAMYDLLKSMCWKIVSKKDQ 351 (452)
Q Consensus 326 ~--~--~~~~~~l~~ll~~~Gf~~v~~~~~ 351 (452)
. . ...-+++.++++++||+++.....
T Consensus 210 ~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 239 (265)
T 2i62_A 210 QKFSSLPLGWETVRDAVEEAGYTIEQFEVI 239 (265)
T ss_dssp EEEECCCCCHHHHHHHHHHTTCEEEEEEEE
T ss_pred ccccccccCHHHHHHHHHHCCCEEEEEEEe
Confidence 0 0 001247889999999999877654
No 80
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.37 E-value=2.1e-11 Score=112.55 Aligned_cols=118 Identities=14% Similarity=0.014 Sum_probs=86.0
Q ss_pred CCCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEeccccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRI 290 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l 290 (452)
+..+|||||||+|.++..+++. .++++|+++..+..+..........++.+...|..+.....++||+|++... +
T Consensus 40 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~-~ 118 (204)
T 3e05_A 40 DDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGGS-G 118 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCCSEEEESCC-T
T ss_pred CCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCCCCEEEECCC-C
Confidence 3458999999999999999863 4677777666655444332222224588888887555433467999998763 3
Q ss_pred cccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCE
Q 012961 291 DWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWK 344 (452)
Q Consensus 291 ~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~ 344 (452)
+ +...+++++.++|+|||++++..+.. ...+++.+.+++.||.
T Consensus 119 ~---~~~~~l~~~~~~LkpgG~l~~~~~~~--------~~~~~~~~~l~~~g~~ 161 (204)
T 3e05_A 119 G---MLEEIIDAVDRRLKSEGVIVLNAVTL--------DTLTKAVEFLEDHGYM 161 (204)
T ss_dssp T---CHHHHHHHHHHHCCTTCEEEEEECBH--------HHHHHHHHHHHHTTCE
T ss_pred c---CHHHHHHHHHHhcCCCeEEEEEeccc--------ccHHHHHHHHHHCCCc
Confidence 3 66789999999999999999976432 2456788899999994
No 81
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.37 E-value=1.9e-12 Score=119.68 Aligned_cols=120 Identities=18% Similarity=0.128 Sum_probs=87.8
Q ss_pred CCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcCCC-eEEEEecCCCCCCCCCCceEEEecccccc
Q 012961 216 IRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGIP-STLGVLGTKRLPYPSRSFELAHCSRCRID 291 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg~~-~~~~~~d~~~lp~~d~sFDlVv~s~~~l~ 291 (452)
..+|||||||+|.++..+++. .++++|+++.++..+.. .+...+.. +.+...|.... .+++||+|+++. .++
T Consensus 61 ~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~~v~~~~~d~~~~--~~~~fD~i~~~~-~~~ 136 (205)
T 3grz_A 61 PLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEE-NAALNGIYDIALQKTSLLAD--VDGKFDLIVANI-LAE 136 (205)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHH-HHHHTTCCCCEEEESSTTTT--CCSCEEEEEEES-CHH
T ss_pred CCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHH-HHHHcCCCceEEEecccccc--CCCCceEEEECC-cHH
Confidence 458999999999999998864 46677766665544432 22233443 78888887654 358899999876 344
Q ss_pred ccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEEEe
Q 012961 292 WLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKD 350 (452)
Q Consensus 292 ~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~ 350 (452)
+ ...+++++.++|+|||+++++..... ..+.+.+++++.||+++....
T Consensus 137 ~---~~~~l~~~~~~L~~gG~l~~~~~~~~--------~~~~~~~~~~~~Gf~~~~~~~ 184 (205)
T 3grz_A 137 I---LLDLIPQLDSHLNEDGQVIFSGIDYL--------QLPKIEQALAENSFQIDLKMR 184 (205)
T ss_dssp H---HHHHGGGSGGGEEEEEEEEEEEEEGG--------GHHHHHHHHHHTTEEEEEEEE
T ss_pred H---HHHHHHHHHHhcCCCCEEEEEecCcc--------cHHHHHHHHHHcCCceEEeec
Confidence 3 36789999999999999999753321 246788999999999887654
No 82
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.37 E-value=1.2e-12 Score=120.67 Aligned_cols=101 Identities=17% Similarity=0.269 Sum_probs=77.7
Q ss_pred CCEEEEECCCCchHH-HHHhh--CCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEeccccccc
Q 012961 216 IRNVLDVGCGVASFG-AYLLS--HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDW 292 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~-~~La~--~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~ 292 (452)
..+|||+|||+|.++ ..++. ..++++|+++.++..+. +.+...+.++.+...|+..+++++++||+|++.. +++|
T Consensus 24 ~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~-~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~-~l~~ 101 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAE-NFSRENNFKLNISKGDIRKLPFKDESMSFVYSYG-TIFH 101 (209)
T ss_dssp CSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHH-HHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECS-CGGG
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHH-HHHHhcCCceEEEECchhhCCCCCCceeEEEEcC-hHHh
Confidence 458999999999874 44443 35677777766665444 2233345678899999999999889999999887 5667
Q ss_pred c--ccHHHHHHHHHHhcCCCcEEEEEeC
Q 012961 293 L--QRDGILLLELDRLLRPGGYFVYSSP 318 (452)
Q Consensus 293 ~--~d~~~~L~ei~RvLkPGG~lvi~~p 318 (452)
. .+...+++++.++|||||++++..+
T Consensus 102 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 129 (209)
T 2p8j_A 102 MRKNDVKEAIDEIKRVLKPGGLACINFL 129 (209)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 6 6678899999999999999999774
No 83
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.37 E-value=3.5e-13 Score=129.85 Aligned_cols=97 Identities=25% Similarity=0.368 Sum_probs=78.8
Q ss_pred CCCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEeccccccccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ 294 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~~ 294 (452)
+..+|||||||+|.++..+++.. .+..+.+.|+++.+++.|+++..++.+...|...+++++++||+|++... .
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~-~---- 158 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADAL-PEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYA-P---- 158 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTC-TTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESC-C----
T ss_pred CCCEEEEECCCCCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCC-h----
Confidence 34589999999999999998741 23455566777777888888887889999999999998899999998653 2
Q ss_pred cHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012961 295 RDGILLLELDRLLRPGGYFVYSSPEA 320 (452)
Q Consensus 295 d~~~~L~ei~RvLkPGG~lvi~~p~~ 320 (452)
..++++.|+|||||.+++..+..
T Consensus 159 ---~~l~~~~~~L~pgG~l~~~~~~~ 181 (269)
T 1p91_A 159 ---CKAEELARVVKPGGWVITATPGP 181 (269)
T ss_dssp ---CCHHHHHHHEEEEEEEEEEEECT
T ss_pred ---hhHHHHHHhcCCCcEEEEEEcCH
Confidence 25899999999999999988754
No 84
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.35 E-value=2.7e-12 Score=126.81 Aligned_cols=140 Identities=19% Similarity=0.319 Sum_probs=98.6
Q ss_pred CCCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHH-------cCCCeEEEEecCCCCC----CC--CC
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALE-------RGIPSTLGVLGTKRLP----YP--SR 278 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~-------rg~~~~~~~~d~~~lp----~~--d~ 278 (452)
+..+|||||||+|.++..+++. .++++|+++.++..+....... ...++.+.++|...++ ++ ++
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 113 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQM 113 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTC
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCC
Confidence 3458999999999999998863 4666766666554444332221 1225788999988876 53 45
Q ss_pred CceEEEecccccccc-c---cHHHHHHHHHHhcCCCcEEEEEeCCC--------------CCC--------C--------
Q 012961 279 SFELAHCSRCRIDWL-Q---RDGILLLELDRLLRPGGYFVYSSPEA--------------YAH--------D-------- 324 (452)
Q Consensus 279 sFDlVv~s~~~l~~~-~---d~~~~L~ei~RvLkPGG~lvi~~p~~--------------~~~--------~-------- 324 (452)
+||+|+|+. ++||. . +...+++++.++|||||+++++.+.. +.. .
T Consensus 114 ~fD~V~~~~-~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 192 (313)
T 3bgv_A 114 CFDICSCQF-VCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNSFELIRRLEASETESFGNEIYTVKFQKKGDYPLFG 192 (313)
T ss_dssp CEEEEEEET-CGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHHHHTTSSSSEEECSSEEEEESCSSCCCSSC
T ss_pred CEEEEEEec-chhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCChHHHHHHHHhhccCccCCeeEEEEeCCCCCCCCcc
Confidence 899999988 68887 3 34679999999999999999987631 000 0
Q ss_pred -------------hhhHHHHHHHHHHHHhCCCEEEEEEeceeEe
Q 012961 325 -------------PENRRIWNAMYDLLKSMCWKIVSKKDQTVIW 355 (452)
Q Consensus 325 -------------~~~~~~~~~l~~ll~~~Gf~~v~~~~~~~iw 355 (452)
+.....++++.++++++||+++.......++
T Consensus 193 ~~~~f~l~~~~~~~~~~~~~~~~~~l~~~~G~~~v~~~~f~~~g 236 (313)
T 3bgv_A 193 CKYDFNLEGVVDVPEFLVYFPLLNEMAKKYNMKLVYKKTFLEFY 236 (313)
T ss_dssp CEEEEEEC---CCEEECCCHHHHHHHGGGGTEEEEEEEEHHHHH
T ss_pred ceEEEEECCcccCcceEEcHHHHHHHHHHcCcEEEEecCHHHHH
Confidence 0001246789999999999999887655444
No 85
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.35 E-value=3.9e-12 Score=119.20 Aligned_cols=124 Identities=10% Similarity=0.130 Sum_probs=88.5
Q ss_pred CCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHcC-CCeEEEEecCCCCC--CCCCCceEEEeccc
Q 012961 216 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERG-IPSTLGVLGTKRLP--YPSRSFELAHCSRC 288 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg-~~~~~~~~d~~~lp--~~d~sFDlVv~s~~ 288 (452)
..+|||||||+|.++..|+.. .++|+|+++.++..+.. .+.+.+ .++.+..+|+..++ +++++||.|++.+.
T Consensus 39 ~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~-~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~ 117 (213)
T 2fca_A 39 NPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQ-KVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFS 117 (213)
T ss_dssp CCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHH-HHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESC
T ss_pred CceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHH-HHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECC
Confidence 347999999999999999863 56777777666655442 233334 35888999988776 77789999987652
Q ss_pred ccccccc--------HHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEEE
Q 012961 289 RIDWLQR--------DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 349 (452)
Q Consensus 289 ~l~~~~d--------~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~ 349 (452)
.+|... ...+++++.++|||||.+++.+... ...+.+.+.+++.||..+...
T Consensus 118 -~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~--------~~~~~~~~~~~~~g~~~~~~~ 177 (213)
T 2fca_A 118 -DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNR--------GLFEYSLKSFSEYGLLLTYVS 177 (213)
T ss_dssp -CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCH--------HHHHHHHHHHHHHTCEEEEEE
T ss_pred -CCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCH--------HHHHHHHHHHHHCCCcccccc
Confidence 333221 2568999999999999999976321 224566777788899876544
No 86
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.35 E-value=2.4e-12 Score=125.26 Aligned_cols=133 Identities=14% Similarity=0.204 Sum_probs=91.3
Q ss_pred CCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEecccccccc
Q 012961 216 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL 293 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~ 293 (452)
..+|||||||+|.++..|++. .|+++|+++..+..+. +.+...+.++.+...|+..+++ +++||+|+++. +++|.
T Consensus 121 ~~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~-~~~~~~~~~~~~~~~d~~~~~~-~~~fD~i~~~~-~~~~~ 197 (286)
T 3m70_A 121 PCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLN-ETKEKENLNISTALYDINAANI-QENYDFIVSTV-VFMFL 197 (286)
T ss_dssp SCEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHHTTCCEEEEECCGGGCCC-CSCEEEEEECS-SGGGS
T ss_pred CCcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHH-HHHHHcCCceEEEEeccccccc-cCCccEEEEcc-chhhC
Confidence 458999999999999999875 4566666665554443 2333345688999999988887 68999999988 67776
Q ss_pred cc--HHHHHHHHHHhcCCCcEEEEEeCCCCC---CCh--hhHHHHHHHHHHHHhCCCEEEEEEecee
Q 012961 294 QR--DGILLLELDRLLRPGGYFVYSSPEAYA---HDP--ENRRIWNAMYDLLKSMCWKIVSKKDQTV 353 (452)
Q Consensus 294 ~d--~~~~L~ei~RvLkPGG~lvi~~p~~~~---~~~--~~~~~~~~l~~ll~~~Gf~~v~~~~~~~ 353 (452)
.+ ...+++++.++|+|||++++....... ... .....-+++.+++.. |+++.......
T Consensus 198 ~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~ 262 (286)
T 3m70_A 198 NRERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPCPLPFSFTFAENELKEYYKD--WEFLEYNENMG 262 (286)
T ss_dssp CGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCSSCCSCCBCTTHHHHHTTT--SEEEEEECCEE
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCCCCCccccCCHHHHHHHhcC--CEEEEEEccCC
Confidence 44 458999999999999998876531110 000 000011356666654 99888765443
No 87
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.33 E-value=9.3e-12 Score=112.55 Aligned_cols=135 Identities=16% Similarity=0.167 Sum_probs=90.1
Q ss_pred cCceeecCCCCCCCccc-HHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHH
Q 012961 175 NGEKINFPGGGTHFHDG-ADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHEN 251 (452)
Q Consensus 175 ~g~~~~F~g~g~~f~~~-~~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~ 251 (452)
.+....|......|.+. .+...+.+.+.+.. .+..+|||+|||+|.++..++.. .++++|+++..+..+
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--------~~~~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~~~~~a 90 (194)
T 1dus_A 19 RGKKLKFKTDSGVFSYGKVDKGTKILVENVVV--------DKDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLA 90 (194)
T ss_dssp TTEEEEEEEETTSTTTTSCCHHHHHHHHHCCC--------CTTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHH
T ss_pred CCCceEEEeCCCcCCccccchHHHHHHHHccc--------CCCCeEEEeCCCCCHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence 34455554333344333 33455556666542 24458999999999999999874 456666666555444
Q ss_pred HHHHHHHcCCC---eEEEEecCCCCCCCCCCceEEEeccccccc-cccHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012961 252 QIQFALERGIP---STLGVLGTKRLPYPSRSFELAHCSRCRIDW-LQRDGILLLELDRLLRPGGYFVYSSPEA 320 (452)
Q Consensus 252 ~~~~A~~rg~~---~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~-~~d~~~~L~ei~RvLkPGG~lvi~~p~~ 320 (452)
.... ...+.. +.+...|... ++++++||+|++.. .+++ ..+...+++++.++|+|||.+++..+..
T Consensus 91 ~~~~-~~~~~~~~~~~~~~~d~~~-~~~~~~~D~v~~~~-~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 91 KENI-KLNNLDNYDIRVVHSDLYE-NVKDRKYNKIITNP-PIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp HHHH-HHTTCTTSCEEEEECSTTT-TCTTSCEEEEEECC-CSTTCHHHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred HHHH-HHcCCCccceEEEECchhc-ccccCCceEEEECC-CcccchhHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 3222 222333 8888888766 34567899999876 4555 3556789999999999999999988653
No 88
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.33 E-value=2.6e-11 Score=112.90 Aligned_cols=121 Identities=12% Similarity=-0.028 Sum_probs=86.8
Q ss_pred CCCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHcCC--CeEEEEecCCCCCCCCCCceEEEeccccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCRI 290 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg~--~~~~~~~d~~~lp~~d~sFDlVv~s~~~l 290 (452)
+..+|||||||+|.++..++.. .|+++|+++.++..+. +.++..+. ++.+..+|+.+.......||+|++... +
T Consensus 55 ~~~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~-~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~-~ 132 (204)
T 3njr_A 55 RGELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQ-KNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGGG-G 132 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECSC-C
T ss_pred CCCEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHH-HHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECCc-c
Confidence 3458999999999999999874 5666666665554443 22333344 488899998773223357999997652 2
Q ss_pred cccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEEEe
Q 012961 291 DWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKD 350 (452)
Q Consensus 291 ~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~ 350 (452)
+.. +++++.++|||||++++..... ....++.+.+++.|+++.....
T Consensus 133 ----~~~-~l~~~~~~LkpgG~lv~~~~~~--------~~~~~~~~~l~~~g~~i~~i~~ 179 (204)
T 3njr_A 133 ----SQA-LYDRLWEWLAPGTRIVANAVTL--------ESETLLTQLHARHGGQLLRIDI 179 (204)
T ss_dssp ----CHH-HHHHHHHHSCTTCEEEEEECSH--------HHHHHHHHHHHHHCSEEEEEEE
T ss_pred ----cHH-HHHHHHHhcCCCcEEEEEecCc--------ccHHHHHHHHHhCCCcEEEEEe
Confidence 445 9999999999999999987532 3456778888899998776553
No 89
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.33 E-value=9.7e-12 Score=116.78 Aligned_cols=126 Identities=13% Similarity=0.073 Sum_probs=90.1
Q ss_pred CCCEEEEECCC-CchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCC-CCCCCCceEEEecccc
Q 012961 215 NIRNVLDVGCG-VASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRL-PYPSRSFELAHCSRCR 289 (452)
Q Consensus 215 ~~~~VLDIGCG-~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~l-p~~d~sFDlVv~s~~~ 289 (452)
+..+|||+||| +|.++..++.. .|+++|+++..+..+. +.+...+.++.+..+|...+ ++++++||+|+++..
T Consensus 55 ~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~-~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp- 132 (230)
T 3evz_A 55 GGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYAR-RNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPP- 132 (230)
T ss_dssp SSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHH-HHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCC-
T ss_pred CCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHH-HHHHHhCCCcEEEeCCchhhhhcccCceeEEEECCC-
Confidence 34589999999 99999988863 5677777766665444 33334455788999986433 456789999998742
Q ss_pred ccccc-------------------cHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEEE
Q 012961 290 IDWLQ-------------------RDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 349 (452)
Q Consensus 290 l~~~~-------------------d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~ 349 (452)
+++.. ....+++++.++|||||++++..+... ...+++.+++++.||.+...+
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~-------~~~~~~~~~l~~~g~~~~~~~ 204 (230)
T 3evz_A 133 YYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE-------KLLNVIKERGIKLGYSVKDIK 204 (230)
T ss_dssp CC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH-------HHHHHHHHHHHHTTCEEEEEE
T ss_pred CcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH-------hHHHHHHHHHHHcCCceEEEE
Confidence 22211 136799999999999999999765422 234678889999999776554
No 90
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.32 E-value=5.5e-12 Score=115.63 Aligned_cols=133 Identities=13% Similarity=0.076 Sum_probs=87.2
Q ss_pred CCEEEEECCCCchHHHHHhhC-----CCccccCChhhhhHHHHHHHHHcCC--CeEEEEecCCCCC-CCCCCceEEEecc
Q 012961 216 IRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLP-YPSRSFELAHCSR 287 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~-----~v~~vdis~~dis~~~~~~A~~rg~--~~~~~~~d~~~lp-~~d~sFDlVv~s~ 287 (452)
..+|||+|||+|.++..+++. .++++|+++..+..+.. .+...+. ++.+..+|+..++ +.+++||+|++..
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 101 (197)
T 3eey_A 23 GDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTK-KLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNL 101 (197)
T ss_dssp TCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH-HHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEEE
T ss_pred CCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHH-HHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEcC
Confidence 458999999999999998863 56777777666654442 2333333 6888999987775 5668999999875
Q ss_pred cccc--------ccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEEE
Q 012961 288 CRID--------WLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 349 (452)
Q Consensus 288 ~~l~--------~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~ 349 (452)
..+. ...+...+++++.++|||||++++.................++...+...+|.+...+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~~~ 171 (197)
T 3eey_A 102 GYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFIVQRTD 171 (197)
T ss_dssp SBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHHHTTSCTTTEEEEEEE
T ss_pred CcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHHHHhCCCCcEEEEEEE
Confidence 3322 1123456999999999999999998744322222222222333333345568776554
No 91
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.32 E-value=4e-12 Score=118.58 Aligned_cols=134 Identities=18% Similarity=0.123 Sum_probs=93.1
Q ss_pred CCCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHH----HcC-CCeEEEEecCCCCCCCCCCceEEEe
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFAL----ERG-IPSTLGVLGTKRLPYPSRSFELAHC 285 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~----~rg-~~~~~~~~d~~~lp~~d~sFDlVv~ 285 (452)
+..+|||||||+|.++..|++. .|+++|+++.++.... +.|+ ..+ .++.+.++|+..+|+++++ |.|+.
T Consensus 27 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~-~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~~ 104 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKIS-AKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELHV 104 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHH-HHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHH-HHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEEE
Confidence 3458999999999999999863 5788888887775433 2232 223 3688999999999988776 77763
Q ss_pred cc--ccc--cccccHHHHHHHHHHhcCCCcEEEEEeCCCCCC--C------hh-hHH-HHHHHHHHHHhCCCEEEEEEe
Q 012961 286 SR--CRI--DWLQRDGILLLELDRLLRPGGYFVYSSPEAYAH--D------PE-NRR-IWNAMYDLLKSMCWKIVSKKD 350 (452)
Q Consensus 286 s~--~~l--~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~--~------~~-~~~-~~~~l~~ll~~~Gf~~v~~~~ 350 (452)
.. +.. +|.+++..+++++.|+|||||.++++....... . +. ... .-+.+..+++++||+++..+.
T Consensus 105 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~~~~~ 183 (218)
T 3mq2_A 105 LMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLADCRY 183 (218)
T ss_dssp ESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred EccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCceeeec
Confidence 22 122 255666889999999999999999965321100 0 00 111 124588899999999887664
No 92
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.31 E-value=2.9e-11 Score=108.37 Aligned_cols=139 Identities=10% Similarity=0.030 Sum_probs=97.5
Q ss_pred HHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHcC-CCeEEEEe
Q 012961 192 ADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERG-IPSTLGVL 268 (452)
Q Consensus 192 ~~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg-~~~~~~~~ 268 (452)
.....+.+.+.+.. .+..+|||+|||+|.++..++.. .++++|+++..+..+... +...+ .++.+...
T Consensus 20 ~~~~~~~~~~~~~~--------~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~-~~~~~~~~~~~~~~ 90 (183)
T 2yxd_A 20 KEEIRAVSIGKLNL--------NKDDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQN-LAKFNIKNCQIIKG 90 (183)
T ss_dssp CHHHHHHHHHHHCC--------CTTCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHH-HHHTTCCSEEEEES
T ss_pred HHHHHHHHHHHcCC--------CCCCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHH-HHHcCCCcEEEEEC
Confidence 34555566666653 23458999999999999999863 466666666555444322 22223 35788888
Q ss_pred cCCCCCCCCCCceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEE
Q 012961 269 GTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSK 348 (452)
Q Consensus 269 d~~~lp~~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~ 348 (452)
|... ++++++||+|++... .+...+++++.++ |||.+++..+.. ....++.+.+++.||++...
T Consensus 91 d~~~-~~~~~~~D~i~~~~~-----~~~~~~l~~~~~~--~gG~l~~~~~~~--------~~~~~~~~~l~~~g~~~~~~ 154 (183)
T 2yxd_A 91 RAED-VLDKLEFNKAFIGGT-----KNIEKIIEILDKK--KINHIVANTIVL--------ENAAKIINEFESRGYNVDAV 154 (183)
T ss_dssp CHHH-HGGGCCCSEEEECSC-----SCHHHHHHHHHHT--TCCEEEEEESCH--------HHHHHHHHHHHHTTCEEEEE
T ss_pred Cccc-cccCCCCcEEEECCc-----ccHHHHHHHHhhC--CCCEEEEEeccc--------ccHHHHHHHHHHcCCeEEEE
Confidence 8766 666678999998874 5667899999999 999999987532 23567888999999987766
Q ss_pred EeceeEe
Q 012961 349 KDQTVIW 355 (452)
Q Consensus 349 ~~~~~iw 355 (452)
+.....+
T Consensus 155 ~~~~~~~ 161 (183)
T 2yxd_A 155 NVFISYA 161 (183)
T ss_dssp EEEEEEE
T ss_pred Eeeeehh
Confidence 5443333
No 93
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.31 E-value=4.9e-12 Score=120.33 Aligned_cols=123 Identities=11% Similarity=0.096 Sum_probs=89.3
Q ss_pred CCEEEEECCCCchHHHHHhh----CCCccccCChhhhhHHHHHHHHHcCC-CeEEEEecCCCCCCC---CCCceEEEecc
Q 012961 216 IRNVLDVGCGVASFGAYLLS----HDIIAMSLAPNDVHENQIQFALERGI-PSTLGVLGTKRLPYP---SRSFELAHCSR 287 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~----~~v~~vdis~~dis~~~~~~A~~rg~-~~~~~~~d~~~lp~~---d~sFDlVv~s~ 287 (452)
..+|||||||+|.++..|+. ..|+++|+++.++..+.. .+...+. ++.+..+|+.+++++ +++||+|+|..
T Consensus 71 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~ 149 (240)
T 1xdz_A 71 VNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEK-LSEALQLENTTFCHDRAETFGQRKDVRESYDIVTARA 149 (240)
T ss_dssp CCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHH-HHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEEC
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHH-HHHHcCCCCEEEEeccHHHhcccccccCCccEEEEec
Confidence 45899999999999998883 256777777666544442 2233344 588899998887754 57899999754
Q ss_pred ccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEEEe
Q 012961 288 CRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKD 350 (452)
Q Consensus 288 ~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~ 350 (452)
..+...+++++.++|+|||++++...... .....++...++..||+++....
T Consensus 150 -----~~~~~~~l~~~~~~LkpgG~l~~~~g~~~------~~~~~~~~~~l~~~g~~~~~~~~ 201 (240)
T 1xdz_A 150 -----VARLSVLSELCLPLVKKNGLFVALKAASA------EEELNAGKKAITTLGGELENIHS 201 (240)
T ss_dssp -----CSCHHHHHHHHGGGEEEEEEEEEEECC-C------HHHHHHHHHHHHHTTEEEEEEEE
T ss_pred -----cCCHHHHHHHHHHhcCCCCEEEEEeCCCc------hHHHHHHHHHHHHcCCeEeEEEE
Confidence 25678899999999999999998643221 12345677888999998876543
No 94
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.31 E-value=2e-12 Score=122.51 Aligned_cols=163 Identities=12% Similarity=0.085 Sum_probs=94.2
Q ss_pred CCCEEEEECCCCchHHHHHhhC----CCccccCC-hhhhhHHH--HHHHHHcCC-CeEEEEecCCCCCCC-CCCceEEEe
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLA-PNDVHENQ--IQFALERGI-PSTLGVLGTKRLPYP-SRSFELAHC 285 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~----~v~~vdis-~~dis~~~--~~~A~~rg~-~~~~~~~d~~~lp~~-d~sFDlVv~ 285 (452)
+..+|||||||+|.++..|+.. .|+|+|++ +.++..+. .+.+.+.+. ++.+..+|+..+|.. .+.+|.|++
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~~ 103 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSISI 103 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEEE
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEEE
Confidence 3458999999999999999842 46778777 43332220 111222343 588899999888632 145565554
Q ss_pred cccc----ccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCC---------hhhHHHH---HHHHHHHHhCCCEEEEEE
Q 012961 286 SRCR----IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHD---------PENRRIW---NAMYDLLKSMCWKIVSKK 349 (452)
Q Consensus 286 s~~~----l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~---------~~~~~~~---~~l~~ll~~~Gf~~v~~~ 349 (452)
++.. .+...+...+++++.|+|||||++++......... +.....| +++..+++++||+++..+
T Consensus 104 ~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~aGf~v~~~~ 183 (225)
T 3p2e_A 104 LFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYEEAEIKKRGLPLLSKAYFLSEQYKAELSNSGFRIDDVK 183 (225)
T ss_dssp ESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC--------------CCHHHHHSHHHHHHHHHHTCEEEEEE
T ss_pred eCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccchhchhhhcCCCCCChhhcchHHHHHHHHHcCCCeeeee
Confidence 3310 01112335689999999999999999432111100 0000111 248899999999998877
Q ss_pred eceeEeecccch-hhHhhhCCCCCCCcccC
Q 012961 350 DQTVIWAKPISN-SCYLKRVPGSRPPLCSS 378 (452)
Q Consensus 350 ~~~~iw~kp~~~-~~~~~r~~~~~p~lc~~ 378 (452)
....-+.+.+.. +.... ..+.+..|++.
T Consensus 184 ~~~~~~~~~~~~~w~~~~-~~~~~~~f~r~ 212 (225)
T 3p2e_A 184 ELDNEYVKQFNSLWAKRL-AFGRKRSFFRV 212 (225)
T ss_dssp EECHHHHTTCCSHHHHHH-HHSSCCCEEEE
T ss_pred ecCHHHHHHHHHHHhccc-CccchhHHHHh
Confidence 654433344433 33222 23455556553
No 95
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.30 E-value=9.6e-12 Score=116.55 Aligned_cols=128 Identities=15% Similarity=0.143 Sum_probs=84.0
Q ss_pred CCCEEEEECCCCchHHHHHhh----CCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCC----CCCCCCCceEEEec
Q 012961 215 NIRNVLDVGCGVASFGAYLLS----HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKR----LPYPSRSFELAHCS 286 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~----~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~----lp~~d~sFDlVv~s 286 (452)
++.+|||||||+|.++..|++ ..|+++|+++.++.. +++.|+++ .++.+.+.|... .++. ++||+|++.
T Consensus 57 ~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~-~~~~a~~~-~~v~~~~~d~~~~~~~~~~~-~~fD~V~~~ 133 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEK-LLELVRER-NNIIPLLFDASKPWKYSGIV-EKVDLIYQD 133 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHH-HHHHHHHC-SSEEEECSCTTCGGGTTTTC-CCEEEEEEC
T ss_pred CCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHH-HHHHHhcC-CCeEEEEcCCCCchhhcccc-cceeEEEEe
Confidence 345899999999999998876 357788887766533 33555544 467777778765 3455 789999986
Q ss_pred cccccccccHHHHHHHHHHhcCCCcEEEEEeCCC---CCCChhhHHHHHHHHHHHHhCCCEEEEEEec
Q 012961 287 RCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEA---YAHDPENRRIWNAMYDLLKSMCWKIVSKKDQ 351 (452)
Q Consensus 287 ~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~---~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~~ 351 (452)
. . ...+...+++++.|+|||||+|+++.+.. ....++ ..+.+-.+.+++. |++++....
T Consensus 134 ~--~-~~~~~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~--~~~~~~~~~l~~~-f~~~~~~~~ 195 (210)
T 1nt2_A 134 I--A-QKNQIEILKANAEFFLKEKGEVVIMVKARSIDSTAEPE--EVFKSVLKEMEGD-FKIVKHGSL 195 (210)
T ss_dssp C--C-STTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCTTSCHH--HHHHHHHHHHHTT-SEEEEEEEC
T ss_pred c--c-ChhHHHHHHHHHHHHhCCCCEEEEEEecCCccccCCHH--HHHHHHHHHHHhh-cEEeeeecC
Confidence 3 2 22334456999999999999999985321 111111 1221122236777 998876643
No 96
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.30 E-value=1.1e-11 Score=117.89 Aligned_cols=103 Identities=19% Similarity=0.329 Sum_probs=77.6
Q ss_pred CCCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEeccccccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDW 292 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~ 292 (452)
+..+|||||||+|.++..|++. .++++|+++.++..+. +.+...+.++.+..+|...++++ ++||+|+|..+.+++
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~-~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~~~ 118 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVAR-RKAKERNLKIEFLQGDVLEIAFK-NEFDAVTMFFSTIMY 118 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHHTTCCCEEEESCGGGCCCC-SCEEEEEECSSGGGG
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHH-HHHHhcCCceEEEECChhhcccC-CCccEEEEcCCchhc
Confidence 3458999999999999999875 4566666665554443 22233456789999999888876 689999987555555
Q ss_pred c--ccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012961 293 L--QRDGILLLELDRLLRPGGYFVYSSPE 319 (452)
Q Consensus 293 ~--~d~~~~L~ei~RvLkPGG~lvi~~p~ 319 (452)
. .+...+++++.++|+|||.+++..+.
T Consensus 119 ~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 119 FDEEDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp SCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 4 34577999999999999999987654
No 97
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.29 E-value=3.8e-11 Score=121.79 Aligned_cols=131 Identities=13% Similarity=0.087 Sum_probs=92.1
Q ss_pred CCCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHcC--CCeEEEEecCCCCCCCCCCceEEEeccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERG--IPSTLGVLGTKRLPYPSRSFELAHCSRC 288 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg--~~~~~~~~d~~~lp~~d~sFDlVv~s~~ 288 (452)
...+|||||||+|.++..+++. .++++|+ +..+..+... ..+.+ .++.+...|.. .+++. .||+|++.+
T Consensus 202 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-~~~~~l~~~v~~~~~d~~-~~~p~-~~D~v~~~~- 276 (369)
T 3gwz_A 202 GAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEAREL-LTGRGLADRCEILPGDFF-ETIPD-GADVYLIKH- 276 (369)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHH-HHHTTCTTTEEEEECCTT-TCCCS-SCSEEEEES-
T ss_pred cCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHh-hhhcCcCCceEEeccCCC-CCCCC-CceEEEhhh-
Confidence 4568999999999999999863 4556666 5444333322 22223 45889999987 56665 799999988
Q ss_pred cccccccHH--HHHHHHHHhcCCCcEEEEEeCCCCCC-Chh----hH----------HHHHHHHHHHHhCCCEEEEEEe
Q 012961 289 RIDWLQRDG--ILLLELDRLLRPGGYFVYSSPEAYAH-DPE----NR----------RIWNAMYDLLKSMCWKIVSKKD 350 (452)
Q Consensus 289 ~l~~~~d~~--~~L~ei~RvLkPGG~lvi~~p~~~~~-~~~----~~----------~~~~~l~~ll~~~Gf~~v~~~~ 350 (452)
++|+.++.. .+|+++.++|+|||++++.++..... ... +. ...+++.++++++||++++...
T Consensus 277 vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~ 355 (369)
T 3gwz_A 277 VLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGLRVERSLP 355 (369)
T ss_dssp CGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEEEEEEEE
T ss_pred hhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCCeEEEEEE
Confidence 566666654 69999999999999999976432111 110 00 1135789999999999987764
No 98
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.29 E-value=9.5e-12 Score=113.67 Aligned_cols=125 Identities=14% Similarity=0.075 Sum_probs=85.7
Q ss_pred CcccHHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcC-CCe
Q 012961 188 FHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERG-IPS 263 (452)
Q Consensus 188 f~~~~~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg-~~~ 263 (452)
+.+..+...+.+.+.+.... ..+..+|||+|||+|.++..++.. .|+++|+++.++..+..+.. ..+ .++
T Consensus 22 ~rp~~~~~~~~l~~~l~~~~-----~~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~v 95 (189)
T 3p9n_A 22 TRPTTDRVRESLFNIVTARR-----DLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIE-ALGLSGA 95 (189)
T ss_dssp C---CHHHHHHHHHHHHHHS-----CCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHH-HHTCSCE
T ss_pred CccCcHHHHHHHHHHHHhcc-----CCCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHH-HcCCCce
Confidence 34445555555555554210 023458999999999999977753 47788877776655553333 334 368
Q ss_pred EEEEecCCCCC--CCCCCceEEEecccccccc-ccHHHHHHHHHH--hcCCCcEEEEEeCC
Q 012961 264 TLGVLGTKRLP--YPSRSFELAHCSRCRIDWL-QRDGILLLELDR--LLRPGGYFVYSSPE 319 (452)
Q Consensus 264 ~~~~~d~~~lp--~~d~sFDlVv~s~~~l~~~-~d~~~~L~ei~R--vLkPGG~lvi~~p~ 319 (452)
.+..+|+..++ +++++||+|++.. .+++. ++...++.++.+ +|+|||++++..+.
T Consensus 96 ~~~~~d~~~~~~~~~~~~fD~i~~~~-p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 96 TLRRGAVAAVVAAGTTSPVDLVLADP-PYNVDSADVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp EEEESCHHHHHHHCCSSCCSEEEECC-CTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred EEEEccHHHHHhhccCCCccEEEECC-CCCcchhhHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 89999977653 4468999999876 35543 667889999999 99999999998754
No 99
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.29 E-value=2.6e-11 Score=108.69 Aligned_cols=120 Identities=13% Similarity=0.106 Sum_probs=81.4
Q ss_pred CCCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHcCC--CeEEEEecC-CCCCCCCCCceEEEecc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGT-KRLPYPSRSFELAHCSR 287 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg~--~~~~~~~d~-~~lp~~d~sFDlVv~s~ 287 (452)
+..+|||||||+|.++..++.. .++++|+++..+..+. +.+.+.+. ++ +...|. ..++..+++||+|++..
T Consensus 25 ~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~-~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~D~i~~~~ 102 (178)
T 3hm2_A 25 PHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERIL-SNAINLGVSDRI-AVQQGAPRAFDDVPDNPDVIFIGG 102 (178)
T ss_dssp TTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHH-HHHHTTTCTTSE-EEECCTTGGGGGCCSCCSEEEECC
T ss_pred CCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHH-HHHHHhCCCCCE-EEecchHhhhhccCCCCCEEEECC
Confidence 3458999999999999998864 3556655554443332 22222243 35 666665 33343337899999887
Q ss_pred ccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEEE
Q 012961 288 CRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 349 (452)
Q Consensus 288 ~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~ 349 (452)
.+++ ..+++++.++|+|||++++..... .....+..++++.|+++....
T Consensus 103 -~~~~----~~~l~~~~~~L~~gG~l~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 151 (178)
T 3hm2_A 103 -GLTA----PGVFAAAWKRLPVGGRLVANAVTV--------ESEQMLWALRKQFGGTISSFA 151 (178)
T ss_dssp --TTC----TTHHHHHHHTCCTTCEEEEEECSH--------HHHHHHHHHHHHHCCEEEEEE
T ss_pred -cccH----HHHHHHHHHhcCCCCEEEEEeecc--------ccHHHHHHHHHHcCCeeEEEE
Confidence 4554 568999999999999999977432 234567788888888776544
No 100
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.28 E-value=7.2e-12 Score=119.56 Aligned_cols=131 Identities=11% Similarity=0.094 Sum_probs=89.4
Q ss_pred CCCEEEEECCCCchHHHHHhh-----CCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCC---CCCCCCCceEEEec
Q 012961 215 NIRNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKR---LPYPSRSFELAHCS 286 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~-----~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~---lp~~d~sFDlVv~s 286 (452)
++.+|||+|||+|.++..|++ ..|+++|+++.++..+. +.+.++ .++..+..|... .++..+++|+|++.
T Consensus 77 pG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~-~~a~~~-~ni~~V~~d~~~p~~~~~~~~~vDvVf~d 154 (233)
T 4df3_A 77 EGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLL-TVVRDR-RNIFPILGDARFPEKYRHLVEGVDGLYAD 154 (233)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHH-HHSTTC-TTEEEEESCTTCGGGGTTTCCCEEEEEEC
T ss_pred CCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-HhhHhh-cCeeEEEEeccCccccccccceEEEEEEe
Confidence 445999999999999999986 25788888777665432 333322 356666666533 45667889999864
Q ss_pred cccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCC-CChhhHHHHHHHHHHHHhCCCEEEEEEe
Q 012961 287 RCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYA-HDPENRRIWNAMYDLLKSMCWKIVSKKD 350 (452)
Q Consensus 287 ~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~-~~~~~~~~~~~l~~ll~~~Gf~~v~~~~ 350 (452)
+.+..+...++.++.++|||||+++++....-. ........+.+..+.+++.||++++...
T Consensus 155 ---~~~~~~~~~~l~~~~r~LKpGG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~GF~l~e~i~ 216 (233)
T 4df3_A 155 ---VAQPEQAAIVVRNARFFLRDGGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGGLEIKDVVH 216 (233)
T ss_dssp ---CCCTTHHHHHHHHHHHHEEEEEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHTTCCEEEEEE
T ss_pred ---ccCChhHHHHHHHHHHhccCCCEEEEEEecccCCCCCChHHHHHHHHHHHHHCCCEEEEEEc
Confidence 445567778999999999999999997522100 0000012345556778899999887654
No 101
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.28 E-value=1.8e-11 Score=121.67 Aligned_cols=128 Identities=14% Similarity=0.187 Sum_probs=90.7
Q ss_pred CCCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHc----CC--CeEEEEecCCCCCCCCCCceEEE
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALER----GI--PSTLGVLGTKRLPYPSRSFELAH 284 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~r----g~--~~~~~~~d~~~lp~~d~sFDlVv 284 (452)
+..+|||||||+|.++..+++. .++++|++ .+++.|+++ +. ++.+...|....+++++ ||+|+
T Consensus 165 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~------~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~D~v~ 237 (335)
T 2r3s_A 165 EPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA------SVLEVAKENARIQGVASRYHTIAGSAFEVDYGND-YDLVL 237 (335)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH------HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSC-EEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH------HHHHHHHHHHHhcCCCcceEEEecccccCCCCCC-CcEEE
Confidence 3458999999999999999864 35555554 444444432 32 48899999887777654 99999
Q ss_pred ecccccccccc--HHHHHHHHHHhcCCCcEEEEEeCCCCCC--ChhhH----------------HHHHHHHHHHHhCCCE
Q 012961 285 CSRCRIDWLQR--DGILLLELDRLLRPGGYFVYSSPEAYAH--DPENR----------------RIWNAMYDLLKSMCWK 344 (452)
Q Consensus 285 ~s~~~l~~~~d--~~~~L~ei~RvLkPGG~lvi~~p~~~~~--~~~~~----------------~~~~~l~~ll~~~Gf~ 344 (452)
+.+ ++|+..+ ...+++++.++|+|||++++.++..... .+... ...+++.++++++||+
T Consensus 238 ~~~-~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~ 316 (335)
T 2r3s_A 238 LPN-FLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFS 316 (335)
T ss_dssp EES-CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCS
T ss_pred Ecc-hhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCC
Confidence 988 5666643 3679999999999999999987543211 11100 0135788999999999
Q ss_pred EEEEEe
Q 012961 345 IVSKKD 350 (452)
Q Consensus 345 ~v~~~~ 350 (452)
.++...
T Consensus 317 ~~~~~~ 322 (335)
T 2r3s_A 317 HSQLHS 322 (335)
T ss_dssp EEEEEC
T ss_pred eeeEEE
Confidence 887654
No 102
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.28 E-value=1e-11 Score=112.09 Aligned_cols=117 Identities=11% Similarity=0.024 Sum_probs=86.6
Q ss_pred CCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEecccccccccc
Q 012961 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQR 295 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~~d 295 (452)
..+|||+|||+|.++..|++.. .+.+.|+++.+++. ..++.+.++|+.. ++++++||+|+++. .+++..+
T Consensus 24 ~~~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~----~~~~~~~~~d~~~-~~~~~~fD~i~~n~-~~~~~~~ 93 (170)
T 3q87_B 24 MKIVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES----HRGGNLVRADLLC-SINQESVDVVVFNP-PYVPDTD 93 (170)
T ss_dssp SCEEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT----CSSSCEEECSTTT-TBCGGGCSEEEECC-CCBTTCC
T ss_pred CCeEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc----ccCCeEEECChhh-hcccCCCCEEEECC-CCccCCc
Confidence 3489999999999999998762 44445555555554 4467888999876 66668999999876 4554332
Q ss_pred ---------HHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEEEec
Q 012961 296 ---------DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKDQ 351 (452)
Q Consensus 296 ---------~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~~ 351 (452)
...++.++.+.| |||.+++..+.. ...+++.+++++.||+.+.....
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~--------~~~~~l~~~l~~~gf~~~~~~~~ 149 (170)
T 3q87_B 94 DPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA--------NRPKEVLARLEERGYGTRILKVR 149 (170)
T ss_dssp CTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG--------GCHHHHHHHHHHTTCEEEEEEEE
T ss_pred cccccCCcchHHHHHHHHhhC-CCCEEEEEEecC--------CCHHHHHHHHHHCCCcEEEEEee
Confidence 256889999999 999999976432 12457889999999998766543
No 103
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.28 E-value=8.6e-12 Score=112.52 Aligned_cols=113 Identities=17% Similarity=0.115 Sum_probs=85.9
Q ss_pred CCCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcC-CCeEEEEecCCCCCC---CCCCceEEEeccccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERG-IPSTLGVLGTKRLPY---PSRSFELAHCSRCRI 290 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg-~~~~~~~~d~~~lp~---~d~sFDlVv~s~~~l 290 (452)
++.+|||||||. + . .|+++.+++.|+++. .++.+.++|+..+++ ++++||+|+|+. ++
T Consensus 12 ~g~~vL~~~~g~-----------v-~-----vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~-~l 73 (176)
T 2ld4_A 12 AGQFVAVVWDKS-----------S-P-----VEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGL-VP 73 (176)
T ss_dssp TTSEEEEEECTT-----------S-C-----HHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEECC-ST
T ss_pred CCCEEEEecCCc-----------e-e-----eeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEECC-hh
Confidence 446899999996 1 1 577888888887763 258899999988887 789999999887 68
Q ss_pred ccc-ccHHHHHHHHHHhcCCCcEEEEEeCCCCCCC-hhhHHHHHHHHHHHHhCCCEEE
Q 012961 291 DWL-QRDGILLLELDRLLRPGGYFVYSSPEAYAHD-PENRRIWNAMYDLLKSMCWKIV 346 (452)
Q Consensus 291 ~~~-~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~-~~~~~~~~~l~~ll~~~Gf~~v 346 (452)
||. ++...++++++|+|||||+|++..|...... .......+++.++++++|| +.
T Consensus 74 ~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf-i~ 130 (176)
T 2ld4_A 74 GSTTLHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL-VE 130 (176)
T ss_dssp TCCCCCCHHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC-EE
T ss_pred hhcccCHHHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC-cE
Confidence 888 8889999999999999999999765321100 0001124678899999999 44
No 104
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.28 E-value=3.9e-11 Score=117.14 Aligned_cols=156 Identities=12% Similarity=0.089 Sum_probs=106.1
Q ss_pred ecCceeecCCCCCCCcccHHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC---CCccccCChhhhhH
Q 012961 174 VNGEKINFPGGGTHFHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHE 250 (452)
Q Consensus 174 ~~g~~~~F~g~g~~f~~~~~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~ 250 (452)
..|-.+.+.-....|..........+.+.+. +..+|||+|||+|.++..++.. .|+++|+++.++..
T Consensus 94 e~g~~f~~d~~~~~f~~~~~~~~~~l~~~~~----------~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~ 163 (278)
T 2frn_A 94 ENGIKYKLDVAKIMFSPANVKERVRMAKVAK----------PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKF 163 (278)
T ss_dssp ETTEEEEEETTTSCCCGGGHHHHHHHHHHCC----------TTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHH
T ss_pred ECCEEEEEEccceeEcCCcHHHHHHHHHhCC----------CCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence 4444555544445565555555555555543 3458999999999999999863 37888888777655
Q ss_pred HHHHHHHHcCCC--eEEEEecCCCCCCCCCCceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhH
Q 012961 251 NQIQFALERGIP--STLGVLGTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENR 328 (452)
Q Consensus 251 ~~~~~A~~rg~~--~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~ 328 (452)
+.. .+...+.. +.+..+|+..++. +++||+|++.. ......++.++.++|+|||++++........ ...
T Consensus 164 a~~-n~~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~-----p~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~--~~~ 234 (278)
T 2frn_A 164 LVE-NIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGY-----VVRTHEFIPKALSIAKDGAIIHYHNTVPEKL--MPR 234 (278)
T ss_dssp HHH-HHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECC-----CSSGGGGHHHHHHHEEEEEEEEEEEEEEGGG--TTT
T ss_pred HHH-HHHHcCCCceEEEEECCHHHhcc-cCCccEEEECC-----chhHHHHHHHHHHHCCCCeEEEEEEeecccc--ccc
Confidence 553 33333433 7789999888876 67899999753 1233568999999999999999976432100 011
Q ss_pred HHHHHHHHHHHhCCCEEEEE
Q 012961 329 RIWNAMYDLLKSMCWKIVSK 348 (452)
Q Consensus 329 ~~~~~l~~ll~~~Gf~~v~~ 348 (452)
...+.+.+.+++.||++...
T Consensus 235 ~~~~~i~~~~~~~G~~~~~~ 254 (278)
T 2frn_A 235 EPFETFKRITKEYGYDVEKL 254 (278)
T ss_dssp TTHHHHHHHHHHTTCEEEEE
T ss_pred cHHHHHHHHHHHcCCeeEEe
Confidence 23567889999999987653
No 105
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.28 E-value=3.5e-11 Score=119.90 Aligned_cols=131 Identities=15% Similarity=0.086 Sum_probs=91.4
Q ss_pred CCCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHcC--CCeEEEEecCCCCCCCCCCceEEEeccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERG--IPSTLGVLGTKRLPYPSRSFELAHCSRC 288 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg--~~~~~~~~d~~~lp~~d~sFDlVv~s~~ 288 (452)
...+|||||||+|.++..+++. .++++|+ +..+..+. +.+.+.+ .++.+...|.. .+++. +||+|++.+
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~-~~~~~~~~~~~v~~~~~d~~-~~~p~-~~D~v~~~~- 243 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAH-RRFLDTGLSGRAQVVVGSFF-DPLPA-GAGGYVLSA- 243 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHH-HHHHHTTCTTTEEEEECCTT-SCCCC-SCSEEEEES-
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHH-HhhhhcCcCcCeEEecCCCC-CCCCC-CCcEEEEeh-
Confidence 4569999999999999999863 3556666 54443333 2222233 45889999986 45665 899999988
Q ss_pred cccccccH--HHHHHHHHHhcCCCcEEEEEeCCCCCCCh---hhH----------HHHHHHHHHHHhCCCEEEEEEe
Q 012961 289 RIDWLQRD--GILLLELDRLLRPGGYFVYSSPEAYAHDP---ENR----------RIWNAMYDLLKSMCWKIVSKKD 350 (452)
Q Consensus 289 ~l~~~~d~--~~~L~ei~RvLkPGG~lvi~~p~~~~~~~---~~~----------~~~~~l~~ll~~~Gf~~v~~~~ 350 (452)
++|+.++. ..+|+++.++|+|||++++.++......+ .+. ...+++.++++++||+++....
T Consensus 244 vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 320 (332)
T 3i53_A 244 VLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRAAHP 320 (332)
T ss_dssp CGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred hhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEEEEE
Confidence 56666664 77999999999999999998753221111 000 1135889999999999887654
No 106
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.26 E-value=1.5e-11 Score=124.48 Aligned_cols=127 Identities=9% Similarity=0.136 Sum_probs=89.4
Q ss_pred CCCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHc----C--CCeEEEEecCCCC--CCCCCCceE
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALER----G--IPSTLGVLGTKRL--PYPSRSFEL 282 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~r----g--~~~~~~~~d~~~l--p~~d~sFDl 282 (452)
...+|||||||+|.++..+++. .++++|+ +.. ++.|+++ + .++.+..+|.... |++ ++||+
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~-----~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~ 251 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQ-----LEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDA 251 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHH-----HHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHH-----HHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCE
Confidence 3468999999999999999863 3555655 433 4444433 3 3588999998775 566 78999
Q ss_pred EEeccccccccccH--HHHHHHHHHhcCCCcEEEEEeCCCCCCChhh---------------------HHHHHHHHHHHH
Q 012961 283 AHCSRCRIDWLQRD--GILLLELDRLLRPGGYFVYSSPEAYAHDPEN---------------------RRIWNAMYDLLK 339 (452)
Q Consensus 283 Vv~s~~~l~~~~d~--~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~---------------------~~~~~~l~~ll~ 339 (452)
|++.. ++|+..+. ..+|+++.++|||||++++.++......... ....+++.++++
T Consensus 252 v~~~~-vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~ 330 (363)
T 3dp7_A 252 VWMSQ-FLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIE 330 (363)
T ss_dssp EEEES-CSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHH
T ss_pred EEEec-hhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHH
Confidence 99988 56655444 5689999999999999999875332111110 012368889999
Q ss_pred hCCCEEEEEE
Q 012961 340 SMCWKIVSKK 349 (452)
Q Consensus 340 ~~Gf~~v~~~ 349 (452)
++||+++...
T Consensus 331 ~AGf~~v~~~ 340 (363)
T 3dp7_A 331 NAGLEVEEIQ 340 (363)
T ss_dssp TTTEEESCCC
T ss_pred HcCCeEEEEE
Confidence 9999887554
No 107
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.25 E-value=3.9e-11 Score=131.32 Aligned_cols=120 Identities=16% Similarity=0.259 Sum_probs=86.1
Q ss_pred ccHHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC-----CCccccCChhhhhHHHHHHHHH------
Q 012961 190 DGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALE------ 258 (452)
Q Consensus 190 ~~~~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~-----~v~~vdis~~dis~~~~~~A~~------ 258 (452)
+......+.+.+.+.. .+..+|||||||+|.++..|++. .|+|+|+++.++..+..+....
T Consensus 704 PL~eqRle~LLelL~~--------~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~ 775 (950)
T 3htx_A 704 PLSKQRVEYALKHIRE--------SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEAC 775 (950)
T ss_dssp CHHHHHHHHHHHHHHH--------SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCS
T ss_pred hHHHHHHHHHHHHhcc--------cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhc
Confidence 3344555555555542 13458999999999999999874 3556655555444433222111
Q ss_pred cCCCeEEEEecCCCCCCCCCCceEEEeccccccccccHH--HHHHHHHHhcCCCcEEEEEeCC
Q 012961 259 RGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQRDG--ILLLELDRLLRPGGYFVYSSPE 319 (452)
Q Consensus 259 rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~~d~~--~~L~ei~RvLkPGG~lvi~~p~ 319 (452)
...++.+.++|+..+++++++||+|+|.. +++|++++. .+++++.|+|||| .+++++|.
T Consensus 776 gl~nVefiqGDa~dLp~~d~sFDlVV~~e-VLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN 836 (950)
T 3htx_A 776 NVKSATLYDGSILEFDSRLHDVDIGTCLE-VIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPN 836 (950)
T ss_dssp SCSEEEEEESCTTSCCTTSCSCCEEEEES-CGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECB
T ss_pred CCCceEEEECchHhCCcccCCeeEEEEeC-chhhCChHHHHHHHHHHHHHcCCC-EEEEEecC
Confidence 12358899999999999989999999987 688887765 4899999999999 88888764
No 108
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.25 E-value=1.3e-10 Score=115.75 Aligned_cols=130 Identities=18% Similarity=0.111 Sum_probs=92.7
Q ss_pred CEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHc-CCCeEEEEecCCCCCCCCCCceEEEecccccc
Q 012961 217 RNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALER-GIPSTLGVLGTKRLPYPSRSFELAHCSRCRID 291 (452)
Q Consensus 217 ~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~r-g~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~ 291 (452)
.+|||||||+|.++..+++. .++++|+ +..+..+........ ..++.+...|... +++ ++||+|++.. ++|
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~D~v~~~~-vl~ 244 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP-SNGDIYLLSR-IIG 244 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC-SSCSEEEEES-CGG
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC-CCCCEEEEch-hcc
Confidence 68999999999999999863 4778888 766655543332221 2468889998766 566 6799999988 566
Q ss_pred ccccHH--HHHHHHHHhcCCCcEEEEEeCCCCCC-ChhhH---------------HHHHHHHHHHHhCCCEEEEEEe
Q 012961 292 WLQRDG--ILLLELDRLLRPGGYFVYSSPEAYAH-DPENR---------------RIWNAMYDLLKSMCWKIVSKKD 350 (452)
Q Consensus 292 ~~~d~~--~~L~ei~RvLkPGG~lvi~~p~~~~~-~~~~~---------------~~~~~l~~ll~~~Gf~~v~~~~ 350 (452)
+..+.. .+++++.++|+|||++++.+...... .+... ...+++.++++++||+++....
T Consensus 245 ~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 321 (334)
T 2ip2_A 245 DLDEAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFAVERIVD 321 (334)
T ss_dssp GCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHHCCCceeEEEE
Confidence 555544 79999999999999999987532111 11000 0235788999999999887653
No 109
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.25 E-value=5.1e-11 Score=120.38 Aligned_cols=131 Identities=19% Similarity=0.177 Sum_probs=88.3
Q ss_pred CCCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHcCC--CeEEEEecCCCCCCCCCCceEEEeccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRC 288 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg~--~~~~~~~d~~~lp~~d~sFDlVv~s~~ 288 (452)
+..+|||||||+|.++..+++. .++++|+ +..+..+... ....+. ++.+...|..+ +++. .||+|++..
T Consensus 182 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~- 256 (374)
T 1qzz_A 182 AVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRR-FADAGLADRVTVAEGDFFK-PLPV-TADVVLLSF- 256 (374)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHH-HHHTTCTTTEEEEECCTTS-CCSC-CEEEEEEES-
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHH-HHhcCCCCceEEEeCCCCC-cCCC-CCCEEEEec-
Confidence 4568999999999999999863 3555655 5444333322 222333 58889998765 4443 499999988
Q ss_pred cccccccH--HHHHHHHHHhcCCCcEEEEEeC--CCCCCChhhH----------------HHHHHHHHHHHhCCCEEEEE
Q 012961 289 RIDWLQRD--GILLLELDRLLRPGGYFVYSSP--EAYAHDPENR----------------RIWNAMYDLLKSMCWKIVSK 348 (452)
Q Consensus 289 ~l~~~~d~--~~~L~ei~RvLkPGG~lvi~~p--~~~~~~~~~~----------------~~~~~l~~ll~~~Gf~~v~~ 348 (452)
++|+..+. ..+++++.++|+|||++++.++ .......... ...+++.++++++||+++..
T Consensus 257 vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~ 336 (374)
T 1qzz_A 257 VLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGLALASE 336 (374)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTEEEEEE
T ss_pred cccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHCCCceEEE
Confidence 56666665 3799999999999999999876 2111110000 12357889999999998876
Q ss_pred Ee
Q 012961 349 KD 350 (452)
Q Consensus 349 ~~ 350 (452)
..
T Consensus 337 ~~ 338 (374)
T 1qzz_A 337 RT 338 (374)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 110
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.24 E-value=1.2e-11 Score=116.82 Aligned_cols=129 Identities=13% Similarity=0.118 Sum_probs=87.8
Q ss_pred CCEEEEECCCCchHHHHHhhC-----CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCC---CCCCCCCceEEEecc
Q 012961 216 IRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKR---LPYPSRSFELAHCSR 287 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~-----~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~---lp~~d~sFDlVv~s~ 287 (452)
..+|||+|||+|.++..|++. .|+++|+++.++.. +++.|+.+ .++.+..+|+.. +++.+++||+|++..
T Consensus 78 ~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~-~~~~a~~~-~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~ 155 (233)
T 2ipx_A 78 GAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRD-LINLAKKR-TNIIPVIEDARHPHKYRMLIAMVDVIFADV 155 (233)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHH-HHHHHHHC-TTEEEECSCTTCGGGGGGGCCCEEEEEECC
T ss_pred CCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHH-HHHHhhcc-CCeEEEEcccCChhhhcccCCcEEEEEEcC
Confidence 458999999999999998763 57788877765433 34555554 578888888876 455568999999854
Q ss_pred ccccccccHHHHHHHHHHhcCCCcEEEEEeCCCC-CCChhhHHHHHHHHHHHHhCCCEEEEEE
Q 012961 288 CRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAY-AHDPENRRIWNAMYDLLKSMCWKIVSKK 349 (452)
Q Consensus 288 ~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~-~~~~~~~~~~~~l~~ll~~~Gf~~v~~~ 349 (452)
. .......++.++.++|||||+++++..... .........+..-.++++++||+++...
T Consensus 156 ~---~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 215 (233)
T 2ipx_A 156 A---QPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQL 215 (233)
T ss_dssp C---CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHHHHTTGGGTEEEEEEE
T ss_pred C---CccHHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHHHHHHHHCCCceEEEE
Confidence 2 222234568899999999999999754310 0011111123222577889999988754
No 111
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.24 E-value=5.4e-11 Score=119.88 Aligned_cols=131 Identities=19% Similarity=0.271 Sum_probs=93.5
Q ss_pred CCCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHcCC--CeEEEEecCCCCCCCCCCceEEEeccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRC 288 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg~--~~~~~~~d~~~lp~~d~sFDlVv~s~~ 288 (452)
+..+|||||||+|.++..+++. .++++|+ +..+..+..... +.+. ++.+...|....++++ +|+|++..
T Consensus 190 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~-~~~~~~~v~~~~~d~~~~~~~~--~D~v~~~~- 264 (359)
T 1x19_A 190 GVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAA-EKGVADRMRGIAVDIYKESYPE--ADAVLFCR- 264 (359)
T ss_dssp TCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHH-HTTCTTTEEEEECCTTTSCCCC--CSEEEEES-
T ss_pred CCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHH-hcCCCCCEEEEeCccccCCCCC--CCEEEEec-
Confidence 4568999999999999999863 5678888 766655543333 3332 4889999988877764 39999988
Q ss_pred ccccccc--HHHHHHHHHHhcCCCcEEEEEeCCCCCC-Ch------------hhH------HHHHHHHHHHHhCCCEEEE
Q 012961 289 RIDWLQR--DGILLLELDRLLRPGGYFVYSSPEAYAH-DP------------ENR------RIWNAMYDLLKSMCWKIVS 347 (452)
Q Consensus 289 ~l~~~~d--~~~~L~ei~RvLkPGG~lvi~~p~~~~~-~~------------~~~------~~~~~l~~ll~~~Gf~~v~ 347 (452)
++|+.++ ...+|+++.++|+|||++++.+...... .+ ... ...+++.++++++||+++.
T Consensus 265 vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~~ll~~aGf~~v~ 344 (359)
T 1x19_A 265 ILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNFDYLSHYILGAGMPFSVLGFKEQARYKEILESLGYKDVT 344 (359)
T ss_dssp CGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCHHHHHHHGGGGGSSCCCCCCCCGGGHHHHHHHHTCEEEE
T ss_pred hhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCCCCchHHHHHHHHHhcCCCCcccCCCCHHHHHHHHHHCCCceEE
Confidence 5666555 5779999999999999998876321100 00 000 1235788999999999887
Q ss_pred EEe
Q 012961 348 KKD 350 (452)
Q Consensus 348 ~~~ 350 (452)
...
T Consensus 345 ~~~ 347 (359)
T 1x19_A 345 MVR 347 (359)
T ss_dssp EEE
T ss_pred EEe
Confidence 654
No 112
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.24 E-value=7e-11 Score=106.56 Aligned_cols=134 Identities=15% Similarity=0.196 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHcCC--CeEEEE
Q 012961 192 ADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGI--PSTLGV 267 (452)
Q Consensus 192 ~~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg~--~~~~~~ 267 (452)
.......+.+.+.. .+..+|||+|||+|.++..++.. .++++|+++..+..+... +...+. ++.+..
T Consensus 18 ~~~~~~~~~~~~~~--------~~~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~-~~~~~~~~~~~~~~ 88 (192)
T 1l3i_A 18 AMEVRCLIMCLAEP--------GKNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMN-LQRHGLGDNVTLME 88 (192)
T ss_dssp CHHHHHHHHHHHCC--------CTTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHH-HHHTTCCTTEEEEE
T ss_pred hHHHHHHHHHhcCC--------CCCCEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHH-HHHcCCCcceEEEe
Confidence 34455555555542 23458999999999999999874 456666655554433322 222333 677888
Q ss_pred ecCCCCCCCC-CCceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEE
Q 012961 268 LGTKRLPYPS-RSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIV 346 (452)
Q Consensus 268 ~d~~~lp~~d-~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v 346 (452)
.|... ++++ ++||+|++... ++ +...+++++.++|+|||.+++..+.. ....++.+++++.||.+.
T Consensus 89 ~d~~~-~~~~~~~~D~v~~~~~-~~---~~~~~l~~~~~~l~~gG~l~~~~~~~--------~~~~~~~~~l~~~g~~~~ 155 (192)
T 1l3i_A 89 GDAPE-ALCKIPDIDIAVVGGS-GG---ELQEILRIIKDKLKPGGRIIVTAILL--------ETKFEAMECLRDLGFDVN 155 (192)
T ss_dssp SCHHH-HHTTSCCEEEEEESCC-TT---CHHHHHHHHHHTEEEEEEEEEEECBH--------HHHHHHHHHHHHTTCCCE
T ss_pred cCHHH-hcccCCCCCEEEECCc-hH---HHHHHHHHHHHhcCCCcEEEEEecCc--------chHHHHHHHHHHCCCceE
Confidence 88655 2333 58999998763 33 34779999999999999999987531 235678888999999543
Q ss_pred E
Q 012961 347 S 347 (452)
Q Consensus 347 ~ 347 (452)
.
T Consensus 156 ~ 156 (192)
T 1l3i_A 156 I 156 (192)
T ss_dssp E
T ss_pred E
Confidence 3
No 113
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.24 E-value=3e-11 Score=114.06 Aligned_cols=126 Identities=16% Similarity=0.186 Sum_probs=83.8
Q ss_pred CCCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCC----CCCCCCCceEEEec
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKR----LPYPSRSFELAHCS 286 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~----lp~~d~sFDlVv~s 286 (452)
+..+|||||||+|.++..|++. .|+++|+++.++..+. +.++.. .++.+...|+.. +++. ++||+|++.
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~-~~~~~~-~~v~~~~~d~~~~~~~~~~~-~~~D~v~~~ 150 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELL-DACAER-ENIIPILGDANKPQEYANIV-EKVDVIYED 150 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHH-HHTTTC-TTEEEEECCTTCGGGGTTTS-CCEEEEEEC
T ss_pred CCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHH-HHhhcC-CCeEEEECCCCCcccccccC-ccEEEEEEe
Confidence 3458999999999999998863 4566666555443322 222222 567888889887 7776 789999832
Q ss_pred cccccccccH---HHHHHHHHHhcCCCcEEEEEeCC-CCCCChhhHHHH-HHHHHHHHhCCCEEEEEEe
Q 012961 287 RCRIDWLQRD---GILLLELDRLLRPGGYFVYSSPE-AYAHDPENRRIW-NAMYDLLKSMCWKIVSKKD 350 (452)
Q Consensus 287 ~~~l~~~~d~---~~~L~ei~RvLkPGG~lvi~~p~-~~~~~~~~~~~~-~~l~~ll~~~Gf~~v~~~~ 350 (452)
..++ ..+++++.++|||||+++++... ...........+ +++. ++++.||+.+....
T Consensus 151 ------~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~l~-~l~~~Gf~~~~~~~ 212 (230)
T 1fbn_A 151 ------VAQPNQAEILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKE-ILEAGGFKIVDEVD 212 (230)
T ss_dssp ------CCSTTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCSSSCHHHHHHHHHH-HHHHHTEEEEEEEE
T ss_pred ------cCChhHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCCCHHHhhHHHHH-HHHHCCCEEEEEEc
Confidence 2333 66899999999999999996321 111111111223 5666 88899998877654
No 114
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.24 E-value=5.4e-11 Score=113.33 Aligned_cols=122 Identities=10% Similarity=0.086 Sum_probs=89.8
Q ss_pred CCCEEEEECCCCchHHHHHhhC-----CCccccCChhhhhHHHHHHHHHcC-CCeEEEEecCCCCCCCCCCceEEEeccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERG-IPSTLGVLGTKRLPYPSRSFELAHCSRC 288 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~-----~v~~vdis~~dis~~~~~~A~~rg-~~~~~~~~d~~~lp~~d~sFDlVv~s~~ 288 (452)
+..+|||+|||+|.++..+++. .++++|+++..+..+........+ .++.+...|..+.++++++||+|++.
T Consensus 96 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~~~D~v~~~-- 173 (258)
T 2pwy_A 96 PGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEEAAYDGVALD-- 173 (258)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCTTCEEEEEEE--
T ss_pred CCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCCcCEEEEC--
Confidence 3458999999999999988753 466777666655444432222203 46888999988888888899999963
Q ss_pred cccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEEEe
Q 012961 289 RIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKD 350 (452)
Q Consensus 289 ~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~ 350 (452)
.+++..++.++.++|+|||++++..+.. ....++...+++.||..+....
T Consensus 174 ----~~~~~~~l~~~~~~L~~gG~l~~~~~~~--------~~~~~~~~~l~~~gf~~~~~~~ 223 (258)
T 2pwy_A 174 ----LMEPWKVLEKAALALKPDRFLVAYLPNI--------TQVLELVRAAEAHPFRLERVLE 223 (258)
T ss_dssp ----SSCGGGGHHHHHHHEEEEEEEEEEESCH--------HHHHHHHHHHTTTTEEEEEEEE
T ss_pred ----CcCHHHHHHHHHHhCCCCCEEEEEeCCH--------HHHHHHHHHHHHCCCceEEEEE
Confidence 2455678999999999999999988643 2345677778889998776554
No 115
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.23 E-value=3.5e-11 Score=115.91 Aligned_cols=121 Identities=13% Similarity=0.147 Sum_probs=89.1
Q ss_pred CCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEecccccccc
Q 012961 216 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL 293 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~ 293 (452)
..+|||+|||+|.++..+++. .|+++|+++..+..+. +.+...+..+.+...|.... +++++||+|+++. ..+
T Consensus 121 ~~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~-~n~~~~~~~v~~~~~d~~~~-~~~~~fD~Vv~n~-~~~-- 195 (254)
T 2nxc_A 121 GDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAE-ANAKRNGVRPRFLEGSLEAA-LPFGPFDLLVANL-YAE-- 195 (254)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHH-HHHHHTTCCCEEEESCHHHH-GGGCCEEEEEEEC-CHH--
T ss_pred CCEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHH-HHHHHcCCcEEEEECChhhc-CcCCCCCEEEECC-cHH--
Confidence 458999999999999988864 5778888887765554 33334454577777776542 4457899999865 233
Q ss_pred ccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEEEe
Q 012961 294 QRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKD 350 (452)
Q Consensus 294 ~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~ 350 (452)
....++.++.++|+|||+++++.... ...+++.+++++.||+++....
T Consensus 196 -~~~~~l~~~~~~LkpgG~lils~~~~--------~~~~~v~~~l~~~Gf~~~~~~~ 243 (254)
T 2nxc_A 196 -LHAALAPRYREALVPGGRALLTGILK--------DRAPLVREAMAGAGFRPLEEAA 243 (254)
T ss_dssp -HHHHHHHHHHHHEEEEEEEEEEEEEG--------GGHHHHHHHHHHTTCEEEEEEE
T ss_pred -HHHHHHHHHHHHcCCCCEEEEEeecc--------CCHHHHHHHHHHCCCEEEEEec
Confidence 24578999999999999999976432 1246788999999999887654
No 116
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.23 E-value=5.1e-11 Score=113.71 Aligned_cols=128 Identities=12% Similarity=0.121 Sum_probs=86.4
Q ss_pred CCCEEEEECCCCchHHHHHhhC-----CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC---CCCCCceEEEec
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP---YPSRSFELAHCS 286 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~-----~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp---~~d~sFDlVv~s 286 (452)
++.+|||+|||+|.++..+++. .|+++|+++.++.. .++.|+++ .++.+.++|+.... ...++||+|++.
T Consensus 76 ~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~-l~~~a~~r-~nv~~i~~Da~~~~~~~~~~~~~D~I~~d 153 (232)
T 3id6_C 76 KGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRE-LLLVAQRR-PNIFPLLADARFPQSYKSVVENVDVLYVD 153 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHH-HHHHHHHC-TTEEEEECCTTCGGGTTTTCCCEEEEEEC
T ss_pred CCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHH-HHHHhhhc-CCeEEEEcccccchhhhccccceEEEEec
Confidence 3468999999999999988862 68889888876533 34555554 57888888876532 123689999976
Q ss_pred cccccccccH-HHHHHHHHHhcCCCcEEEEEeCCCC---CCChhhHHHHHHHHHHHHhCCCEEEEEEe
Q 012961 287 RCRIDWLQRD-GILLLELDRLLRPGGYFVYSSPEAY---AHDPENRRIWNAMYDLLKSMCWKIVSKKD 350 (452)
Q Consensus 287 ~~~l~~~~d~-~~~L~ei~RvLkPGG~lvi~~p~~~---~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~ 350 (452)
.. . ++. ..++..+.++|||||+|+++..... ...++ +.+.+....+++.||++++...
T Consensus 154 ~a-~---~~~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~--e~~~~~~~~L~~~gf~~~~~~~ 215 (232)
T 3id6_C 154 IA-Q---PDQTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPK--EIYKTEVEKLENSNFETIQIIN 215 (232)
T ss_dssp CC-C---TTHHHHHHHHHHHHEEEEEEEEEEEC-------CCSS--SSTTHHHHHHHHTTEEEEEEEE
T ss_pred CC-C---hhHHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHH--HHHHHHHHHHHHCCCEEEEEec
Confidence 52 2 333 3455667779999999999854321 11111 2244566777888999887654
No 117
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.23 E-value=8.3e-12 Score=127.34 Aligned_cols=119 Identities=14% Similarity=0.168 Sum_probs=80.5
Q ss_pred cHHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHcCC----C
Q 012961 191 GADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGI----P 262 (452)
Q Consensus 191 ~~~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg~----~ 262 (452)
..+.-.+.+.+.++. ....+|||+|||+|.++..++.. .|+++|+++.++..+..+. ...+. +
T Consensus 206 ~~d~~~~~ll~~l~~--------~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~-~~ngl~~~~~ 276 (375)
T 4dcm_A 206 GLDIGARFFMQHLPE--------NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNV-ETNMPEALDR 276 (375)
T ss_dssp SCCHHHHHHHHTCCC--------SCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHH-HHHCGGGGGG
T ss_pred cccHHHHHHHHhCcc--------cCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHH-HHcCCCcCce
Confidence 444444555555542 12358999999999999999863 5677777766665544332 23332 4
Q ss_pred eEEEEecCCCCCCCCCCceEEEecccccccc---cc--HHHHHHHHHHhcCCCcEEEEEeCCC
Q 012961 263 STLGVLGTKRLPYPSRSFELAHCSRCRIDWL---QR--DGILLLELDRLLRPGGYFVYSSPEA 320 (452)
Q Consensus 263 ~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~---~d--~~~~L~ei~RvLkPGG~lvi~~p~~ 320 (452)
+.+...|... ++++++||+|+|+. .+|+. .+ ...+++++.++|||||.++++.+..
T Consensus 277 v~~~~~D~~~-~~~~~~fD~Ii~np-pfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~ 337 (375)
T 4dcm_A 277 CEFMINNALS-GVEPFRFNAVLCNP-PFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRH 337 (375)
T ss_dssp EEEEECSTTT-TCCTTCEEEEEECC-CC-------CCHHHHHHHHHHHHEEEEEEEEEEEETT
T ss_pred EEEEechhhc-cCCCCCeeEEEECC-CcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECC
Confidence 6778888766 56678999999876 34432 11 2358999999999999999987543
No 118
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.23 E-value=8.9e-12 Score=117.51 Aligned_cols=121 Identities=15% Similarity=0.176 Sum_probs=84.6
Q ss_pred CCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHcC-CCeEEEEecCCCC-C--CCCCCceEEEecc
Q 012961 216 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERG-IPSTLGVLGTKRL-P--YPSRSFELAHCSR 287 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg-~~~~~~~~d~~~l-p--~~d~sFDlVv~s~ 287 (452)
..+|||||||+|.++..++.. .|+|+|+++.++..+.. .+.+.+ .++.+..+|+..+ + +++++||.|++.+
T Consensus 35 ~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~-~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 35 APVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLA-SAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHH-HHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHH-HHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 458999999999999999863 47888888777765553 333344 3688888987764 3 6789999999875
Q ss_pred ccccccccH--------HHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhC-CCEEE
Q 012961 288 CRIDWLQRD--------GILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSM-CWKIV 346 (452)
Q Consensus 288 ~~l~~~~d~--------~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~-Gf~~v 346 (452)
..+|.... ..+++++.|+|||||+|++++... ...+.+.+++... +|+.+
T Consensus 114 -~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~--------~~~~~~~~~~~~~~~~~~~ 172 (218)
T 3dxy_A 114 -PDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWE--------PYAEHMLEVMSSIDGYKNL 172 (218)
T ss_dssp -CCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCH--------HHHHHHHHHHHTSTTEEEC
T ss_pred -CCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCH--------HHHHHHHHHHHhCCCcccc
Confidence 24443222 259999999999999999977422 1234555555543 56543
No 119
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.23 E-value=7.7e-12 Score=118.62 Aligned_cols=99 Identities=12% Similarity=0.135 Sum_probs=75.6
Q ss_pred CCCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHcC--CCeEEEEecCCCCCCCC-----CCceEEEe
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERG--IPSTLGVLGTKRLPYPS-----RSFELAHC 285 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg--~~~~~~~~d~~~lp~~d-----~sFDlVv~ 285 (452)
+..+|||||||+|.++..|++. .|+++|+ ++.+++.|+++. .++.+.++|+..+++.. ..||+|++
T Consensus 56 ~~~~vLD~GcG~G~~~~~la~~~~~v~gvD~-----s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~ 130 (245)
T 3ggd_A 56 PELPLIDFACGNGTQTKFLSQFFPRVIGLDV-----SKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYM 130 (245)
T ss_dssp TTSCEEEETCTTSHHHHHHHHHSSCEEEEES-----CHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHHhCCCEEEEEC-----CHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEE
Confidence 3457999999999999999874 4555554 555556665553 36888999988765432 24999998
Q ss_pred ccccccccc--cHHHHHHHHHHhcCCCcEEEEEeCC
Q 012961 286 SRCRIDWLQ--RDGILLLELDRLLRPGGYFVYSSPE 319 (452)
Q Consensus 286 s~~~l~~~~--d~~~~L~ei~RvLkPGG~lvi~~p~ 319 (452)
.. ++++.+ +...+++++.++|||||++++.+..
T Consensus 131 ~~-~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 165 (245)
T 3ggd_A 131 RT-GFHHIPVEKRELLGQSLRILLGKQGAMYLIELG 165 (245)
T ss_dssp ES-SSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred cc-hhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 87 677777 6688999999999999999987753
No 120
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.22 E-value=2.9e-11 Score=121.49 Aligned_cols=126 Identities=12% Similarity=0.036 Sum_probs=86.7
Q ss_pred CCCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHH----HcCCCeEEEEecCCCCCCCCCCceEEEec
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFAL----ERGIPSTLGVLGTKRLPYPSRSFELAHCS 286 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~----~rg~~~~~~~~d~~~lp~~d~sFDlVv~s 286 (452)
...+|||||||+|.++..+++. .++++|+ +... ..++ ....++.+..+|.. .+++ +||+|++.
T Consensus 184 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-----~~~~-~~~~~~~~~~~~~v~~~~~d~~-~~~p--~~D~v~~~ 254 (348)
T 3lst_A 184 ATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-----AEVV-ARHRLDAPDVAGRWKVVEGDFL-REVP--HADVHVLK 254 (348)
T ss_dssp SSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-----HHHH-TTCCCCCGGGTTSEEEEECCTT-TCCC--CCSEEEEE
T ss_pred CCceEEEECCccCHHHHHHHHHCCCCEEEEecC-----HHHh-hcccccccCCCCCeEEEecCCC-CCCC--CCcEEEEe
Confidence 4568999999999999999863 2344444 2222 1110 11235788889885 4455 79999998
Q ss_pred cccccccccH--HHHHHHHHHhcCCCcEEEEEeCCCCCCChh------h----------HHHHHHHHHHHHhCCCEEEEE
Q 012961 287 RCRIDWLQRD--GILLLELDRLLRPGGYFVYSSPEAYAHDPE------N----------RRIWNAMYDLLKSMCWKIVSK 348 (452)
Q Consensus 287 ~~~l~~~~d~--~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~------~----------~~~~~~l~~ll~~~Gf~~v~~ 348 (452)
. ++|+.++. ..+|+++.++|||||++++.+......... + ....+++.++++++||++++.
T Consensus 255 ~-vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 333 (348)
T 3lst_A 255 R-ILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAGLRLDRV 333 (348)
T ss_dssp S-CGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTEEEEEE
T ss_pred h-hccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCCCceEEE
Confidence 8 57766666 579999999999999999987532111100 0 012358899999999998876
Q ss_pred Ee
Q 012961 349 KD 350 (452)
Q Consensus 349 ~~ 350 (452)
..
T Consensus 334 ~~ 335 (348)
T 3lst_A 334 VG 335 (348)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 121
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.22 E-value=1.1e-10 Score=114.82 Aligned_cols=126 Identities=11% Similarity=0.135 Sum_probs=84.0
Q ss_pred CCCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcCCCeEEE-EecCCCCC---CCCCCceEEEecc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGIPSTLG-VLGTKRLP---YPSRSFELAHCSR 287 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg~~~~~~-~~d~~~lp---~~d~sFDlVv~s~ 287 (452)
...+|||||||+|.++..|++. .|+++|+++.++..+ .+...++... ..++..++ ++..+||+|+|..
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a-----~r~~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~ 159 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWK-----LRQDDRVRSMEQYNFRYAEPVDFTEGLPSFASIDV 159 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHH-----HHTCTTEEEECSCCGGGCCGGGCTTCCCSEEEECC
T ss_pred cccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHH-----HHhCcccceecccCceecchhhCCCCCCCEEEEEe
Confidence 3458999999999999988864 588888888777543 2223333222 22333333 3445699999866
Q ss_pred ccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCC------------Chhh-HHHHHHHHHHHHhCCCEEEEEE
Q 012961 288 CRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAH------------DPEN-RRIWNAMYDLLKSMCWKIVSKK 349 (452)
Q Consensus 288 ~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~------------~~~~-~~~~~~l~~ll~~~Gf~~v~~~ 349 (452)
+ ++. ...+|.++.|+|||||.+++...+.+.. ++.. ...-+++.+++.++||.+....
T Consensus 160 s-f~s---l~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~~ 230 (291)
T 3hp7_A 160 S-FIS---LNLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGLD 230 (291)
T ss_dssp S-SSC---GGGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEEE
T ss_pred e-Hhh---HHHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEEE
Confidence 4 333 3679999999999999999874332221 1111 1234678899999999987654
No 122
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.21 E-value=1.4e-10 Score=112.59 Aligned_cols=138 Identities=15% Similarity=0.125 Sum_probs=92.4
Q ss_pred cHHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhh----CCCccccCChhhhhHHHHHHHHHcCC-CeEE
Q 012961 191 GADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLS----HDIIAMSLAPNDVHENQIQFALERGI-PSTL 265 (452)
Q Consensus 191 ~~~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~----~~v~~vdis~~dis~~~~~~A~~rg~-~~~~ 265 (452)
..+...+.+.+.+. .+..+|||+|||+|.++..++. ..++++|+++..+..+..+ +...+. ++.+
T Consensus 94 ~te~l~~~~l~~~~---------~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n-~~~~~~~~v~~ 163 (276)
T 2b3t_A 94 DTECLVEQALARLP---------EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRN-AQHLAIKNIHI 163 (276)
T ss_dssp THHHHHHHHHHHSC---------SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHH-HHHHTCCSEEE
T ss_pred hHHHHHHHHHHhcc---------cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHH-HHHcCCCceEE
Confidence 34555555555543 1334899999999999999884 3567777766665544432 222343 5888
Q ss_pred EEecCCCCCCCCCCceEEEeccc------------ccccc------------ccHHHHHHHHHHhcCCCcEEEEEeCCCC
Q 012961 266 GVLGTKRLPYPSRSFELAHCSRC------------RIDWL------------QRDGILLLELDRLLRPGGYFVYSSPEAY 321 (452)
Q Consensus 266 ~~~d~~~lp~~d~sFDlVv~s~~------------~l~~~------------~d~~~~L~ei~RvLkPGG~lvi~~p~~~ 321 (452)
..+|.... +++++||+|+++.. +++|. .....++.++.++|+|||++++..+..
T Consensus 164 ~~~d~~~~-~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~- 241 (276)
T 2b3t_A 164 LQSDWFSA-LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQ- 241 (276)
T ss_dssp ECCSTTGG-GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSS-
T ss_pred EEcchhhh-cccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECch-
Confidence 88887653 44578999998631 12221 234668999999999999999975432
Q ss_pred CCChhhHHHHHHHHHHHHhCCCEEEEE
Q 012961 322 AHDPENRRIWNAMYDLLKSMCWKIVSK 348 (452)
Q Consensus 322 ~~~~~~~~~~~~l~~ll~~~Gf~~v~~ 348 (452)
.-+++.+++++.||+.+..
T Consensus 242 --------~~~~~~~~l~~~Gf~~v~~ 260 (276)
T 2b3t_A 242 --------QGEAVRQAFILAGYHDVET 260 (276)
T ss_dssp --------CHHHHHHHHHHTTCTTCCE
T ss_pred --------HHHHHHHHHHHCCCcEEEE
Confidence 1356788899999975543
No 123
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.20 E-value=6.8e-11 Score=116.50 Aligned_cols=98 Identities=8% Similarity=0.089 Sum_probs=72.7
Q ss_pred CCCCEEEEECCCCchHHHHH-hh---CCCccccCChhhhhHHHHHHHHHcC-CCeEEEEecCCCCCCCCCCceEEEeccc
Q 012961 214 GNIRNVLDVGCGVASFGAYL-LS---HDIIAMSLAPNDVHENQIQFALERG-IPSTLGVLGTKRLPYPSRSFELAHCSRC 288 (452)
Q Consensus 214 ~~~~~VLDIGCG~G~~~~~L-a~---~~v~~vdis~~dis~~~~~~A~~rg-~~~~~~~~d~~~lp~~d~sFDlVv~s~~ 288 (452)
.++.+|||||||+|.++..+ +. ..|+++|+++.++..+....+ +.+ .++.+..+|+..++ +++||+|++..
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~-~~gl~~v~~v~gDa~~l~--d~~FDvV~~~a- 196 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIE-GLGVDGVNVITGDETVID--GLEFDVLMVAA- 196 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHH-HHTCCSEEEEESCGGGGG--GCCCSEEEECT-
T ss_pred CCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHH-hcCCCCeEEEECchhhCC--CCCcCEEEECC-
Confidence 34569999999999776443 33 357777776666655543332 224 46889999988876 68999999754
Q ss_pred cccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012961 289 RIDWLQRDGILLLELDRLLRPGGYFVYSSP 318 (452)
Q Consensus 289 ~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p 318 (452)
. .++...+++++.|+|||||++++...
T Consensus 197 ~---~~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 197 L---AEPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp T---CSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred C---ccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 2 46778899999999999999999764
No 124
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.20 E-value=4.7e-11 Score=113.91 Aligned_cols=121 Identities=15% Similarity=0.093 Sum_probs=82.0
Q ss_pred CCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHH-----c-CCCeEEEEecCCC-CC--CCCCCceE
Q 012961 216 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALE-----R-GIPSTLGVLGTKR-LP--YPSRSFEL 282 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~-----r-g~~~~~~~~d~~~-lp--~~d~sFDl 282 (452)
..+|||||||+|.++..|+.. .++|+|+++.++..+....... . ..++.+..+|+.. ++ +++++||.
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D~ 126 (235)
T 3ckk_A 47 QVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLTK 126 (235)
T ss_dssp CEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEEE
T ss_pred CCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCeeE
Confidence 347999999999999999863 4677777776665544322210 2 2468899999876 66 77899999
Q ss_pred EEecccccccccc--------HHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCC-CEE
Q 012961 283 AHCSRCRIDWLQR--------DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMC-WKI 345 (452)
Q Consensus 283 Vv~s~~~l~~~~d--------~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~G-f~~ 345 (452)
|++.+. .+|... ...+++++.++|||||.|++.+... .....+.+.+...+ |..
T Consensus 127 v~~~~~-dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~--------~~~~~~~~~l~~~~~f~~ 189 (235)
T 3ckk_A 127 MFFLFP-DPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVL--------ELHDWMCTHFEEHPLFER 189 (235)
T ss_dssp EEEESC-C-----------CCCHHHHHHHHHHEEEEEEEEEEESCH--------HHHHHHHHHHHTSTTEEE
T ss_pred EEEeCC-CchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCH--------HHHHHHHHHHHHCCCccc
Confidence 986542 333211 1369999999999999999976321 22345666667665 543
No 125
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.20 E-value=4.3e-11 Score=115.12 Aligned_cols=124 Identities=15% Similarity=0.033 Sum_probs=89.1
Q ss_pred CCCEEEEECCCCchHHHHHhh----CCCccccCChhhhhHHHHHHHHHcCC-CeEEEEecCCCCCCC---CCCceEEEec
Q 012961 215 NIRNVLDVGCGVASFGAYLLS----HDIIAMSLAPNDVHENQIQFALERGI-PSTLGVLGTKRLPYP---SRSFELAHCS 286 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~----~~v~~vdis~~dis~~~~~~A~~rg~-~~~~~~~d~~~lp~~---d~sFDlVv~s 286 (452)
...+|||||||+|..+..|+. ..|+++|+++..+..+.. .+++.+. ++.+..+|+++++.. +++||+|+|.
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~-~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVER-AIEVLGLKGARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHH-HHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHH-HHHHhCCCceEEEECcHHHhhcccccCCCceEEEEC
Confidence 456899999999999988875 357778777766655443 3333344 588999998877653 4789999975
Q ss_pred cccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEEEe
Q 012961 287 RCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKD 350 (452)
Q Consensus 287 ~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~ 350 (452)
. ..+...+++++.++|||||++++...... .....++...++..||+++....
T Consensus 159 a-----~~~~~~ll~~~~~~LkpgG~l~~~~g~~~------~~e~~~~~~~l~~~G~~~~~~~~ 211 (249)
T 3g89_A 159 A-----VAPLCVLSELLLPFLEVGGAAVAMKGPRV------EEELAPLPPALERLGGRLGEVLA 211 (249)
T ss_dssp S-----SCCHHHHHHHHGGGEEEEEEEEEEECSCC------HHHHTTHHHHHHHHTEEEEEEEE
T ss_pred C-----cCCHHHHHHHHHHHcCCCeEEEEEeCCCc------HHHHHHHHHHHHHcCCeEEEEEE
Confidence 4 23557899999999999999997553211 12244567778889999876654
No 126
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.20 E-value=4.5e-11 Score=115.51 Aligned_cols=123 Identities=11% Similarity=0.031 Sum_probs=81.2
Q ss_pred CCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHc-------CC--CeEEEEecCCCC-------CCCCCC
Q 012961 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER-------GI--PSTLGVLGTKRL-------PYPSRS 279 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~r-------g~--~~~~~~~d~~~l-------p~~d~s 279 (452)
..+|||+|||+|.++..|+... .+..+.+.|+++.+++.|+++ +. ++.+...|+.++ ++++++
T Consensus 37 ~~~VLDlG~G~G~~~l~la~~~-~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~ 115 (260)
T 2ozv_A 37 ACRIADLGAGAGAAGMAVAARL-EKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDEH 115 (260)
T ss_dssp CEEEEECCSSSSHHHHHHHHHC-TTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTTC
T ss_pred CCEEEEeCChHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCCC
Confidence 4589999999999999998641 122333444455555555543 22 378888998776 356789
Q ss_pred ceEEEecccccc----------------c-cccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCC
Q 012961 280 FELAHCSRCRID----------------W-LQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMC 342 (452)
Q Consensus 280 FDlVv~s~~~l~----------------~-~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~G 342 (452)
||+|+++..... . ......+++++.++|||||++++..+.. ...++...+++.
T Consensus 116 fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~---------~~~~~~~~l~~~- 185 (260)
T 2ozv_A 116 FHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQ---------SVAEIIAACGSR- 185 (260)
T ss_dssp EEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGG---------GHHHHHHHHTTT-
T ss_pred cCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHH---------HHHHHHHHHHhc-
Confidence 999998631111 1 1235678999999999999999976542 234566677664
Q ss_pred CEEEEEE
Q 012961 343 WKIVSKK 349 (452)
Q Consensus 343 f~~v~~~ 349 (452)
|..+...
T Consensus 186 ~~~~~i~ 192 (260)
T 2ozv_A 186 FGGLEIT 192 (260)
T ss_dssp EEEEEEE
T ss_pred CCceEEE
Confidence 7655544
No 127
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.20 E-value=1.8e-10 Score=115.79 Aligned_cols=132 Identities=18% Similarity=0.195 Sum_probs=90.6
Q ss_pred CCCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHcCC--CeEEEEecCCCCCCCCCCceEEEeccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRC 288 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg~--~~~~~~~d~~~lp~~d~sFDlVv~s~~ 288 (452)
+..+|||||||+|.++..+++. .++++|+ +..+..+.. .+...+. ++.+...|..+ +++. .||+|++..
T Consensus 183 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~-~~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~- 257 (360)
T 1tw3_A 183 NVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARS-YLKDEGLSDRVDVVEGDFFE-PLPR-KADAIILSF- 257 (360)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHH-HHHHTTCTTTEEEEECCTTS-CCSS-CEEEEEEES-
T ss_pred cCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHH-HHHhcCCCCceEEEeCCCCC-CCCC-CccEEEEcc-
Confidence 4468999999999999998863 3455665 555544432 2223333 58889888754 4443 499999988
Q ss_pred cccccccH--HHHHHHHHHhcCCCcEEEEEeCC-CCC-CChhh-----H----------HHHHHHHHHHHhCCCEEEEEE
Q 012961 289 RIDWLQRD--GILLLELDRLLRPGGYFVYSSPE-AYA-HDPEN-----R----------RIWNAMYDLLKSMCWKIVSKK 349 (452)
Q Consensus 289 ~l~~~~d~--~~~L~ei~RvLkPGG~lvi~~p~-~~~-~~~~~-----~----------~~~~~l~~ll~~~Gf~~v~~~ 349 (452)
++|+.++. ..+++++.++|+|||++++.++. ... ..... . ...+++.++++++||+++...
T Consensus 258 vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~ 337 (360)
T 1tw3_A 258 VLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLVVEEVR 337 (360)
T ss_dssp CGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEE
T ss_pred cccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCeEEEEE
Confidence 56666555 47999999999999999998765 211 11000 0 022588899999999988766
Q ss_pred ec
Q 012961 350 DQ 351 (452)
Q Consensus 350 ~~ 351 (452)
..
T Consensus 338 ~~ 339 (360)
T 1tw3_A 338 QL 339 (360)
T ss_dssp EE
T ss_pred eC
Confidence 43
No 128
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.19 E-value=4e-11 Score=116.39 Aligned_cols=99 Identities=13% Similarity=0.023 Sum_probs=69.4
Q ss_pred CCCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCC-----CCCCceEEEecccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPY-----PSRSFELAHCSRCR 289 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~-----~d~sFDlVv~s~~~ 289 (452)
+..+|||||||+|.++..|++. +..+.+.|+++.+++.|+++.... +...+...++. .+++||+|+++. +
T Consensus 45 ~g~~VLDlGcGtG~~a~~La~~---g~~V~gvD~S~~ml~~Ar~~~~~~-~v~~~~~~~~~~~~~~~~~~fD~Vv~~~-~ 119 (261)
T 3iv6_A 45 PGSTVAVIGASTRFLIEKALER---GASVTVFDFSQRMCDDLAEALADR-CVTIDLLDITAEIPKELAGHFDFVLNDR-L 119 (261)
T ss_dssp TTCEEEEECTTCHHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTSSS-CCEEEECCTTSCCCGGGTTCCSEEEEES-C
T ss_pred CcCEEEEEeCcchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHhc-cceeeeeecccccccccCCCccEEEEhh-h
Confidence 4458999999999999999975 234445566666667777653222 22333333332 246899999987 4
Q ss_pred cccc--ccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012961 290 IDWL--QRDGILLLELDRLLRPGGYFVYSSPE 319 (452)
Q Consensus 290 l~~~--~d~~~~L~ei~RvLkPGG~lvi~~p~ 319 (452)
++|. ++...+++++.++| |||.++++.+.
T Consensus 120 l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 120 INRFTTEEARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp GGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred hHhCCHHHHHHHHHHHHHhC-cCcEEEEEecc
Confidence 5554 34466999999999 99999998754
No 129
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.19 E-value=8.5e-11 Score=117.86 Aligned_cols=130 Identities=10% Similarity=0.129 Sum_probs=91.5
Q ss_pred CCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHcCC--CeEEEEecCCCCC-CCCCCceEEEeccc
Q 012961 216 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLP-YPSRSFELAHCSRC 288 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg~--~~~~~~~d~~~lp-~~d~sFDlVv~s~~ 288 (452)
..+|||||||+|.++..+++. .++++|+ +..+..+. +...+.+. ++.+..+|....+ +..+.||+|++..
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~-~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~- 256 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAAR-KTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLND- 256 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHH-HHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEES-
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHH-HHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEec-
Confidence 569999999999999999863 4667777 55554443 23333333 4888999987765 1335699999988
Q ss_pred cccccccH--HHHHHHHHHhcCCCcEEEEEeCCCCCC--Chhh----------------HHHHHHHHHHHHhCCCEEEEE
Q 012961 289 RIDWLQRD--GILLLELDRLLRPGGYFVYSSPEAYAH--DPEN----------------RRIWNAMYDLLKSMCWKIVSK 348 (452)
Q Consensus 289 ~l~~~~d~--~~~L~ei~RvLkPGG~lvi~~p~~~~~--~~~~----------------~~~~~~l~~ll~~~Gf~~v~~ 348 (452)
++|+.++. ..+|+++.++|+|||++++.++..... .+.. ....+++.++++++||+++..
T Consensus 257 vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 336 (352)
T 3mcz_A 257 CLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRDAGLAVGER 336 (352)
T ss_dssp CGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred ccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHHHHHHCCCceeee
Confidence 56666654 779999999999999999976422110 0100 012357899999999999874
No 130
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.19 E-value=8.1e-12 Score=125.55 Aligned_cols=117 Identities=17% Similarity=0.170 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHcCCCeEEEE
Q 012961 192 ADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGV 267 (452)
Q Consensus 192 ~~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg~~~~~~~ 267 (452)
.+...+.+.+.+.. ....+|||+|||+|.++..+++. .++++|+++.++..+.. .+...+....+..
T Consensus 181 ~d~~~~~ll~~l~~--------~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~-~~~~~~~~~~~~~ 251 (343)
T 2pjd_A 181 LDVGSQLLLSTLTP--------HTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRA-TLAANGVEGEVFA 251 (343)
T ss_dssp CCHHHHHHHHHSCT--------TCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHH-HHHHTTCCCEEEE
T ss_pred CcHHHHHHHHhcCc--------CCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHH-HHHHhCCCCEEEE
Confidence 34445555565532 12347999999999999998863 57777776665544442 2233456677777
Q ss_pred ecCCCCCCCCCCceEEEeccccccc-----cccHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012961 268 LGTKRLPYPSRSFELAHCSRCRIDW-----LQRDGILLLELDRLLRPGGYFVYSSPEA 320 (452)
Q Consensus 268 ~d~~~lp~~d~sFDlVv~s~~~l~~-----~~d~~~~L~ei~RvLkPGG~lvi~~p~~ 320 (452)
.|....+ +++||+|+++. .+|+ ..+...+++++.++|||||.++++.+..
T Consensus 252 ~d~~~~~--~~~fD~Iv~~~-~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 306 (343)
T 2pjd_A 252 SNVFSEV--KGRFDMIISNP-PFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAF 306 (343)
T ss_dssp CSTTTTC--CSCEEEEEECC-CCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEETT
T ss_pred ccccccc--cCCeeEEEECC-CcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcCC
Confidence 7775543 67899999887 4553 3445779999999999999999987643
No 131
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.19 E-value=3.8e-11 Score=116.65 Aligned_cols=120 Identities=9% Similarity=0.105 Sum_probs=87.2
Q ss_pred CCCEEEEECCCCchHHHHHhhC-----CCccccCChhhhhHHHHHHHHHc-C-CCeEEEEecCCCCCCCCCCceEEEecc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALER-G-IPSTLGVLGTKRLPYPSRSFELAHCSR 287 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~-----~v~~vdis~~dis~~~~~~A~~r-g-~~~~~~~~d~~~lp~~d~sFDlVv~s~ 287 (452)
+..+|||+|||+|.++..+++. .++++|+++..+..+.. .+... + .++.+...|+.. ++++++||+|++.
T Consensus 110 ~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~-~~~~~~g~~~v~~~~~d~~~-~~~~~~fD~Vi~~- 186 (275)
T 1yb2_A 110 PGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMD-NLSEFYDIGNVRTSRSDIAD-FISDQMYDAVIAD- 186 (275)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHH-HHHTTSCCTTEEEECSCTTT-CCCSCCEEEEEEC-
T ss_pred CcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHH-HHHhcCCCCcEEEEECchhc-cCcCCCccEEEEc-
Confidence 4458999999999999988753 46667666655543332 22222 3 358888888876 6667889999962
Q ss_pred ccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEEEe
Q 012961 288 CRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKD 350 (452)
Q Consensus 288 ~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~ 350 (452)
.+++..+++++.++|||||+++++.+.. ...+++.+.+++.||..++...
T Consensus 187 -----~~~~~~~l~~~~~~LkpgG~l~i~~~~~--------~~~~~~~~~l~~~Gf~~~~~~~ 236 (275)
T 1yb2_A 187 -----IPDPWNHVQKIASMMKPGSVATFYLPNF--------DQSEKTVLSLSASGMHHLETVE 236 (275)
T ss_dssp -----CSCGGGSHHHHHHTEEEEEEEEEEESSH--------HHHHHHHHHSGGGTEEEEEEEE
T ss_pred -----CcCHHHHHHHHHHHcCCCCEEEEEeCCH--------HHHHHHHHHHHHCCCeEEEEEE
Confidence 3456679999999999999999988643 1245677778889998876554
No 132
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.19 E-value=7e-12 Score=119.55 Aligned_cols=125 Identities=12% Similarity=0.170 Sum_probs=75.8
Q ss_pred CCCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcCCCeEEEE-ecC-----CCCCCCCCCceEEEe
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGIPSTLGV-LGT-----KRLPYPSRSFELAHC 285 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg~~~~~~~-~d~-----~~lp~~d~sFDlVv~ 285 (452)
...+|||||||+|.++..|++. .|+++|+++.++.. |+++...+.... .+. ..++ ...||.+.+
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~-----a~~~~~~~~~~~~~~~~~~~~~~~~--~~~~d~~~~ 109 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAW-----KIRSDERVVVMEQFNFRNAVLADFE--QGRPSFTSI 109 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCH-----HHHTCTTEEEECSCCGGGCCGGGCC--SCCCSEEEE
T ss_pred CCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHH-----HHHhCccccccccceEEEeCHhHcC--cCCCCEEEE
Confidence 3458999999999999999874 57788887777654 334333322111 111 1221 112344333
Q ss_pred ccccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCC------------Chh-hHHHHHHHHHHHHhCCCEEEEEEe
Q 012961 286 SRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAH------------DPE-NRRIWNAMYDLLKSMCWKIVSKKD 350 (452)
Q Consensus 286 s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~------------~~~-~~~~~~~l~~ll~~~Gf~~v~~~~ 350 (452)
....... ..++.++.|+|||||++++...+.+.. ++. .....+++.++++++||+++....
T Consensus 110 D~v~~~l----~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~~ 183 (232)
T 3opn_A 110 DVSFISL----DLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLTF 183 (232)
T ss_dssp CCSSSCG----GGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEEE
T ss_pred EEEhhhH----HHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEEE
Confidence 2211111 568999999999999999874322111 111 112346889999999999876653
No 133
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.18 E-value=6.8e-11 Score=109.40 Aligned_cols=110 Identities=13% Similarity=0.082 Sum_probs=78.1
Q ss_pred HHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHcC-CCeEEEEecC
Q 012961 194 KYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERG-IPSTLGVLGT 270 (452)
Q Consensus 194 ~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg-~~~~~~~~d~ 270 (452)
.....+.+.+.. .+..+|||||||+|.++..+++. .|+++|+++..+..+..... ..+ .++.+..+|.
T Consensus 64 ~~~~~~~~~l~~--------~~~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~v~~~~~d~ 134 (210)
T 3lbf_A 64 YMVARMTELLEL--------TPQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLK-NLDLHNVSTRHGDG 134 (210)
T ss_dssp HHHHHHHHHTTC--------CTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHH-HTTCCSEEEEESCG
T ss_pred HHHHHHHHhcCC--------CCCCEEEEEcCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHHHH-HcCCCceEEEECCc
Confidence 344455555542 24558999999999999999873 56677666655544432222 223 3588899998
Q ss_pred CCCCCCCCCceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012961 271 KRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPE 319 (452)
Q Consensus 271 ~~lp~~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~ 319 (452)
.....++++||+|++.. .+++..+ ++.++|||||++++..+.
T Consensus 135 ~~~~~~~~~~D~i~~~~-~~~~~~~------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 135 WQGWQARAPFDAIIVTA-APPEIPT------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp GGCCGGGCCEEEEEESS-BCSSCCT------HHHHTEEEEEEEEEEECS
T ss_pred ccCCccCCCccEEEEcc-chhhhhH------HHHHhcccCcEEEEEEcC
Confidence 77766678999999887 4666543 689999999999998875
No 134
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.17 E-value=1.5e-10 Score=117.48 Aligned_cols=130 Identities=12% Similarity=-0.003 Sum_probs=88.4
Q ss_pred CCCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEeccccccccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ 294 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~~ 294 (452)
...+|||||||+|.++..+++.. ..+.+...|+ +.+++.|++. .++.+..+|..+ +++++ |+|++.. ++|+..
T Consensus 203 ~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~-~~v~~~~~d~~~-~~p~~--D~v~~~~-vlh~~~ 275 (368)
T 3reo_A 203 GLTTIVDVGGGTGAVASMIVAKY-PSINAINFDL-PHVIQDAPAF-SGVEHLGGDMFD-GVPKG--DAIFIKW-ICHDWS 275 (368)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCCC-TTEEEEECCTTT-CCCCC--SEEEEES-CGGGBC
T ss_pred CCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeh-HHHHHhhhhc-CCCEEEecCCCC-CCCCC--CEEEEec-hhhcCC
Confidence 45689999999999999998631 1122223344 3444444433 568899999876 77754 9999988 566555
Q ss_pred cH--HHHHHHHHHhcCCCcEEEEEeCCCCCC---Chh-------hH-----------HHHHHHHHHHHhCCCEEEEEEec
Q 012961 295 RD--GILLLELDRLLRPGGYFVYSSPEAYAH---DPE-------NR-----------RIWNAMYDLLKSMCWKIVSKKDQ 351 (452)
Q Consensus 295 d~--~~~L~ei~RvLkPGG~lvi~~p~~~~~---~~~-------~~-----------~~~~~l~~ll~~~Gf~~v~~~~~ 351 (452)
+. ..+|++++++|+|||+++|.+...... ... +. ..-+++.++++++||+.++....
T Consensus 276 ~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~ll~~AGF~~v~~~~~ 355 (368)
T 3reo_A 276 DEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGFRGFKVASC 355 (368)
T ss_dssp HHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHHHHHHTTCCEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHHHHHHCCCeeeEEEEe
Confidence 44 468999999999999999987532111 100 00 01257899999999999876653
No 135
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.17 E-value=6.1e-11 Score=119.57 Aligned_cols=98 Identities=14% Similarity=0.165 Sum_probs=76.7
Q ss_pred CCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcCCC--eEEEEecCCCCCCCCCCceEEEeccc--
Q 012961 216 IRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGIP--STLGVLGTKRLPYPSRSFELAHCSRC-- 288 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg~~--~~~~~~d~~~lp~~d~sFDlVv~s~~-- 288 (452)
..+|||||||+|.++..+++. .|+++|+++ ++..+. +.++..+.. +.+..+|+.++++++++||+|++...
T Consensus 67 ~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~-~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~~ 144 (349)
T 3q7e_A 67 DKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAV-KIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMGY 144 (349)
T ss_dssp TCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHH-HHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCBB
T ss_pred CCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHH-HHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEccccc
Confidence 458999999999999999874 678888884 554443 444444543 89999999999998899999998541
Q ss_pred cccccccHHHHHHHHHHhcCCCcEEEE
Q 012961 289 RIDWLQRDGILLLELDRLLRPGGYFVY 315 (452)
Q Consensus 289 ~l~~~~d~~~~L~ei~RvLkPGG~lvi 315 (452)
.+++......++.++.|+|||||+++.
T Consensus 145 ~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 145 CLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp TBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred cccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 234446778899999999999999984
No 136
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.17 E-value=8.5e-11 Score=104.18 Aligned_cols=112 Identities=16% Similarity=0.181 Sum_probs=80.5
Q ss_pred CCCEEEEECCCCchHHHHHhhC-----CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC--------CCCCCce
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP--------YPSRSFE 281 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~-----~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp--------~~d~sFD 281 (452)
+..+|||+|||+|.++..+++. .++++|+++ ++.. .++.+...|....+ +++++||
T Consensus 22 ~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----------~~~~~~~~d~~~~~~~~~~~~~~~~~~~D 90 (180)
T 1ej0_A 22 PGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI----------VGVDFLQGDFRDELVMKALLERVGDSKVQ 90 (180)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC----------TTEEEEESCTTSHHHHHHHHHHHTTCCEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc----------CcEEEEEcccccchhhhhhhccCCCCcee
Confidence 3458999999999999888753 567777776 4321 46788888988776 6778999
Q ss_pred EEEeccccccccccH-----------HHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEE
Q 012961 282 LAHCSRCRIDWLQRD-----------GILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVS 347 (452)
Q Consensus 282 lVv~s~~~l~~~~d~-----------~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~ 347 (452)
+|++.. .+++.... ..+++++.++|+|||.+++..+... ....+...+++. |..+.
T Consensus 91 ~i~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~--------~~~~~~~~~~~~-~~~~~ 157 (180)
T 1ej0_A 91 VVMSDM-APNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGE--------GFDEYLREIRSL-FTKVK 157 (180)
T ss_dssp EEEECC-CCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESST--------THHHHHHHHHHH-EEEEE
T ss_pred EEEECC-CccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCC--------cHHHHHHHHHHh-hhhEE
Confidence 999866 45554443 5799999999999999999775432 123444555553 65554
No 137
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.16 E-value=9.5e-11 Score=117.81 Aligned_cols=98 Identities=14% Similarity=0.165 Sum_probs=75.4
Q ss_pred CCCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcC--CCeEEEEecCCCCCCCCCCceEEEeccc-
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERG--IPSTLGVLGTKRLPYPSRSFELAHCSRC- 288 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg--~~~~~~~~d~~~lp~~d~sFDlVv~s~~- 288 (452)
+..+|||||||+|.++..+++. .|+++|+++ ++..+. +.++..+ .++.+..+|+.++++++++||+|++...
T Consensus 64 ~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~-~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~ 141 (340)
T 2fyt_A 64 KDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAM-DIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWMG 141 (340)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHH-HHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCCB
T ss_pred CCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHH-HHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCch
Confidence 3458999999999999999864 577888875 554333 3333444 4688999999999988889999998641
Q ss_pred -cccccccHHHHHHHHHHhcCCCcEEE
Q 012961 289 -RIDWLQRDGILLLELDRLLRPGGYFV 314 (452)
Q Consensus 289 -~l~~~~d~~~~L~ei~RvLkPGG~lv 314 (452)
.+.+..+...++.++.|+|||||.++
T Consensus 142 ~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 142 YFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp TTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred hhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 24444566779999999999999998
No 138
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.16 E-value=8.3e-11 Score=108.41 Aligned_cols=116 Identities=14% Similarity=0.031 Sum_probs=81.1
Q ss_pred CCEEEEECCCCchHHHHHhh----CCCccccCChhhhhHHHHHHHHHcCC-CeEEEEecCCCCCCCCCCceEEEeccccc
Q 012961 216 IRNVLDVGCGVASFGAYLLS----HDIIAMSLAPNDVHENQIQFALERGI-PSTLGVLGTKRLPYPSRSFELAHCSRCRI 290 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~----~~v~~vdis~~dis~~~~~~A~~rg~-~~~~~~~d~~~lp~~d~sFDlVv~s~~~l 290 (452)
..+|||||||+|.++..++. ..++++|+++..+..+. +.+...+. ++.+...|+..++ ++++||+|++..
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~-~~~~~~~~~~v~~~~~d~~~~~-~~~~~D~i~~~~--- 140 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLR-QVQHELKLENIEPVQSRVEEFP-SEPPFDGVISRA--- 140 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHH-HHHHHTTCSSEEEEECCTTTSC-CCSCEEEEECSC---
T ss_pred CCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHH-HHHHHcCCCCeEEEecchhhCC-ccCCcCEEEEec---
Confidence 34899999999999998885 25667776665554443 22223343 4888888988776 457899999653
Q ss_pred cccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEEE
Q 012961 291 DWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 349 (452)
Q Consensus 291 ~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~ 349 (452)
..+...++.++.++|+|||++++...... -+++..+++ ||+.+..+
T Consensus 141 --~~~~~~~l~~~~~~L~~gG~l~~~~~~~~---------~~~~~~~~~--g~~~~~~~ 186 (207)
T 1jsx_A 141 --FASLNDMVSWCHHLPGEQGRFYALKGQMP---------EDEIALLPE--EYQVESVV 186 (207)
T ss_dssp --SSSHHHHHHHHTTSEEEEEEEEEEESSCC---------HHHHHTSCT--TEEEEEEE
T ss_pred --cCCHHHHHHHHHHhcCCCcEEEEEeCCCc---------hHHHHHHhc--CCceeeee
Confidence 24557899999999999999999753321 234444444 89887644
No 139
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.16 E-value=5.2e-11 Score=120.77 Aligned_cols=129 Identities=14% Similarity=-0.002 Sum_probs=89.3
Q ss_pred CCCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEeccccccccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ 294 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~~ 294 (452)
...+|||||||+|.++..+++.. ..+.+...|+ +.+++.|++. .++.+..+|... ++++ ||+|++.. ++|+.+
T Consensus 209 ~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~-~~v~~~~~d~~~-~~~~--~D~v~~~~-~lh~~~ 281 (372)
T 1fp1_D 209 GISTLVDVGGGSGRNLELIISKY-PLIKGINFDL-PQVIENAPPL-SGIEHVGGDMFA-SVPQ--GDAMILKA-VCHNWS 281 (372)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCCC-TTEEEEECCTTT-CCCC--EEEEEEES-SGGGSC
T ss_pred CCCEEEEeCCCCcHHHHHHHHHC-CCCeEEEeCh-HHHHHhhhhc-CCCEEEeCCccc-CCCC--CCEEEEec-ccccCC
Confidence 34689999999999999998741 1122233344 4444555432 458889999876 6664 99999988 577777
Q ss_pred cHH--HHHHHHHHhcCCCcEEEEEeC---CCCCCC-----hhhH------------HHHHHHHHHHHhCCCEEEEEEe
Q 012961 295 RDG--ILLLELDRLLRPGGYFVYSSP---EAYAHD-----PENR------------RIWNAMYDLLKSMCWKIVSKKD 350 (452)
Q Consensus 295 d~~--~~L~ei~RvLkPGG~lvi~~p---~~~~~~-----~~~~------------~~~~~l~~ll~~~Gf~~v~~~~ 350 (452)
+.. .+|+++.++|+|||++++.+. ...... .... ...+++.++++++||+++....
T Consensus 282 d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 359 (372)
T 1fp1_D 282 DEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEKLSKLSGFSKFQVAC 359 (372)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhccCCccCCHHHHHHHHHHCCCceEEEEE
Confidence 776 899999999999999998753 211110 0000 0235788999999999887654
No 140
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.15 E-value=1.3e-10 Score=110.80 Aligned_cols=119 Identities=11% Similarity=0.148 Sum_probs=86.2
Q ss_pred CCCEEEEECCCCchHHHHHhhC-----CCccccCChhhhhHHHHHHHHHcCC-C-eEEEEecCCCCCCCCCCceEEEecc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGI-P-STLGVLGTKRLPYPSRSFELAHCSR 287 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~-----~v~~vdis~~dis~~~~~~A~~rg~-~-~~~~~~d~~~lp~~d~sFDlVv~s~ 287 (452)
+..+|||+|||+|.++..++.. .++++|+++..+..+.... ...+. + +.+...|+.+. +++++||+|++..
T Consensus 93 ~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~-~~~~~~D~v~~~~ 170 (255)
T 3mb5_A 93 PGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENI-KWAGFDDRVTIKLKDIYEG-IEEENVDHVILDL 170 (255)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHH-HHHTCTTTEEEECSCGGGC-CCCCSEEEEEECS
T ss_pred CCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHH-HHcCCCCceEEEECchhhc-cCCCCcCEEEECC
Confidence 4458999999999999998763 4667776665554443222 22243 3 78888887754 6778899999742
Q ss_pred ccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCC--CEEEEEE
Q 012961 288 CRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMC--WKIVSKK 349 (452)
Q Consensus 288 ~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~G--f~~v~~~ 349 (452)
+++..+++++.++|+|||++++..+.. ....++.+.+++.| |..+...
T Consensus 171 ------~~~~~~l~~~~~~L~~gG~l~~~~~~~--------~~~~~~~~~l~~~g~~f~~~~~~ 220 (255)
T 3mb5_A 171 ------PQPERVVEHAAKALKPGGFFVAYTPCS--------NQVMRLHEKLREFKDYFMKPRTI 220 (255)
T ss_dssp ------SCGGGGHHHHHHHEEEEEEEEEEESSH--------HHHHHHHHHHHHTGGGBSCCEEE
T ss_pred ------CCHHHHHHHHHHHcCCCCEEEEEECCH--------HHHHHHHHHHHHcCCCccccEEE
Confidence 455678999999999999999987542 23456778889999 8766544
No 141
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.15 E-value=7.4e-12 Score=115.27 Aligned_cols=139 Identities=12% Similarity=-0.007 Sum_probs=80.3
Q ss_pred HHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHcCCCeEEEE
Q 012961 192 ADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGV 267 (452)
Q Consensus 192 ~~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg~~~~~~~ 267 (452)
.+.+.+.+.+.+.. ..+..+|||+|||+|.++..+++. .++++|+++.++..+.... ...+.++.+.+
T Consensus 14 ~~~~~~~~~~~l~~-------~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~~~~~ 85 (215)
T 4dzr_A 14 TEVLVEEAIRFLKR-------MPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNA-ERFGAVVDWAA 85 (215)
T ss_dssp HHHHHHHHHHHHTT-------CCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC--------------------CCH
T ss_pred HHHHHHHHHHHhhh-------cCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHH-HHhCCceEEEE
Confidence 34455556555542 124458999999999999999874 4666766665554433222 12233566677
Q ss_pred ecCCCCCCCC-----CCceEEEecccccccccc--------------------------HHHHHHHHHHhcCCCcE-EEE
Q 012961 268 LGTKRLPYPS-----RSFELAHCSRCRIDWLQR--------------------------DGILLLELDRLLRPGGY-FVY 315 (452)
Q Consensus 268 ~d~~~lp~~d-----~sFDlVv~s~~~l~~~~d--------------------------~~~~L~ei~RvLkPGG~-lvi 315 (452)
+|+.. ++++ ++||+|+++.. ++...+ ...+++++.++|||||+ +++
T Consensus 86 ~d~~~-~~~~~~~~~~~fD~i~~npp-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 163 (215)
T 4dzr_A 86 ADGIE-WLIERAERGRPWHAIVSNPP-YIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFL 163 (215)
T ss_dssp HHHHH-HHHHHHHTTCCBSEEEECCC-CCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEE
T ss_pred cchHh-hhhhhhhccCcccEEEECCC-CCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 77655 5554 89999998532 111110 15688999999999999 555
Q ss_pred EeCCCCCCChhhHHHHHHHHHHHH--hCCCEEEEEE
Q 012961 316 SSPEAYAHDPENRRIWNAMYDLLK--SMCWKIVSKK 349 (452)
Q Consensus 316 ~~p~~~~~~~~~~~~~~~l~~ll~--~~Gf~~v~~~ 349 (452)
..+.. ..+.+.++++ +.||..+...
T Consensus 164 ~~~~~---------~~~~~~~~l~~~~~gf~~~~~~ 190 (215)
T 4dzr_A 164 EVGHN---------QADEVARLFAPWRERGFRVRKV 190 (215)
T ss_dssp ECTTS---------CHHHHHHHTGGGGGGTEECCEE
T ss_pred EECCc---------cHHHHHHHHHHhhcCCceEEEE
Confidence 54321 1356778888 8899766543
No 142
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.14 E-value=2e-10 Score=111.95 Aligned_cols=101 Identities=13% Similarity=0.162 Sum_probs=73.4
Q ss_pred CCEEEEECCCC---chHHHHHhh----CCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC-----------CCC
Q 012961 216 IRNVLDVGCGV---ASFGAYLLS----HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP-----------YPS 277 (452)
Q Consensus 216 ~~~VLDIGCG~---G~~~~~La~----~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp-----------~~d 277 (452)
..+|||||||+ |.++..+.. ..|+++|+++.++..+.... ....++.++.+|+.+.+ ++.
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~--~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~ 155 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALL--AKDPNTAVFTADVRDPEYILNHPDVRRMIDF 155 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHH--TTCTTEEEEECCTTCHHHHHHSHHHHHHCCT
T ss_pred CCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhc--CCCCCeEEEEeeCCCchhhhccchhhccCCC
Confidence 46899999999 988766653 35677776665554433222 11246889999976421 233
Q ss_pred CCceEEEecccccccccc--HHHHHHHHHHhcCCCcEEEEEeCC
Q 012961 278 RSFELAHCSRCRIDWLQR--DGILLLELDRLLRPGGYFVYSSPE 319 (452)
Q Consensus 278 ~sFDlVv~s~~~l~~~~d--~~~~L~ei~RvLkPGG~lvi~~p~ 319 (452)
.+||+|++.. ++||+++ ...+|+++.++|+|||+|+++...
T Consensus 156 ~~~d~v~~~~-vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~ 198 (274)
T 2qe6_A 156 SRPAAIMLVG-MLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLV 198 (274)
T ss_dssp TSCCEEEETT-TGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEB
T ss_pred CCCEEEEEec-hhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEec
Confidence 4899999877 7888876 688999999999999999998754
No 143
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.13 E-value=7.2e-11 Score=118.74 Aligned_cols=128 Identities=9% Similarity=-0.021 Sum_probs=88.8
Q ss_pred CCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEecccccccccc
Q 012961 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQR 295 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~~d 295 (452)
..+|||||||+|.++..+++.. ....+...|+ +.+++.|++. .++.+..+|... ++++ ||+|++.. ++|+..+
T Consensus 189 ~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~-~~v~~~~~d~~~-~~p~--~D~v~~~~-~lh~~~d 261 (352)
T 1fp2_A 189 LESIVDVGGGTGTTAKIICETF-PKLKCIVFDR-PQVVENLSGS-NNLTYVGGDMFT-SIPN--ADAVLLKY-ILHNWTD 261 (352)
T ss_dssp CSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCCB-TTEEEEECCTTT-CCCC--CSEEEEES-CGGGSCH
T ss_pred CceEEEeCCCccHHHHHHHHHC-CCCeEEEeeC-HHHHhhcccC-CCcEEEeccccC-CCCC--ccEEEeeh-hhccCCH
Confidence 4589999999999999998631 1123333344 4455555443 348888888765 5653 99999988 5776677
Q ss_pred HH--HHHHHHHHhcCC---CcEEEEEeCCCCCCCh-----hhH--------------HHHHHHHHHHHhCCCEEEEEEe
Q 012961 296 DG--ILLLELDRLLRP---GGYFVYSSPEAYAHDP-----ENR--------------RIWNAMYDLLKSMCWKIVSKKD 350 (452)
Q Consensus 296 ~~--~~L~ei~RvLkP---GG~lvi~~p~~~~~~~-----~~~--------------~~~~~l~~ll~~~Gf~~v~~~~ 350 (452)
.. .+|+++.++||| ||++++.++....... ... ...+++.++++++||+.+....
T Consensus 262 ~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~ 340 (352)
T 1fp2_A 262 KDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLNGKERNEEEWKKLFIEAGFQHYKISP 340 (352)
T ss_dssp HHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGGGTCCCEEHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHhccCCCCCHHHHHHHHHHCCCCeeEEEe
Confidence 66 899999999999 9999998753211110 000 1135888999999999887654
No 144
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.13 E-value=8.8e-11 Score=116.24 Aligned_cols=125 Identities=12% Similarity=0.138 Sum_probs=86.0
Q ss_pred CCCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHc---------CCCeEEEEecCCCCCC--CCCC
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALER---------GIPSTLGVLGTKRLPY--PSRS 279 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~r---------g~~~~~~~~d~~~lp~--~d~s 279 (452)
++.+|||||||+|.++..+++. .|+++|+++..+ +.|+++ ..++.+..+|...++. ++++
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i-----~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~ 169 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVM-----EQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNT 169 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHH-----HHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTC
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHH-----HHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCc
Confidence 3468999999999999999864 455666555444 444432 2468888888766543 4688
Q ss_pred ceEEEeccccccccccH----HHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEEE
Q 012961 280 FELAHCSRCRIDWLQRD----GILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 349 (452)
Q Consensus 280 FDlVv~s~~~l~~~~d~----~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~ 349 (452)
||+|++.. ..++.+.. ..+++++.++|||||++++.....+.. ......+.+.+++.||..+...
T Consensus 170 fDvIi~d~-~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~----~~~~~~~~~~l~~~GF~~v~~~ 238 (304)
T 3bwc_A 170 YDVVIIDT-TDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWLD----LELIEKMSRFIRETGFASVQYA 238 (304)
T ss_dssp EEEEEEEC-C---------CCHHHHHHHHHHEEEEEEEEEEECCTTTC----HHHHHHHHHHHHHHTCSEEEEE
T ss_pred eeEEEECC-CCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcccc----hHHHHHHHHHHHhCCCCcEEEE
Confidence 99999854 33332222 578999999999999999987654321 2235678888999999876543
No 145
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.13 E-value=9e-11 Score=108.29 Aligned_cols=145 Identities=10% Similarity=0.137 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHcCCCeEEEE
Q 012961 192 ADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGV 267 (452)
Q Consensus 192 ~~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg~~~~~~~ 267 (452)
.+.+.+.+...++ .+.+|||||||+|.++..++.. .++++|+++.++.-+. +.+...|....+.+
T Consensus 36 ld~fY~~~~~~l~----------~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar-~~~~~~g~~~~v~~ 104 (200)
T 3fzg_A 36 LNDFYTYVFGNIK----------HVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLS-SIIGKLKTTIKYRF 104 (200)
T ss_dssp HHHHHHHHHHHSC----------CCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHH-HHHHHSCCSSEEEE
T ss_pred HHHHHHHHHhhcC----------CCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHH-HHHHhcCCCccEEE
Confidence 3455555555553 3458999999999999999642 5666666666554443 22333466545555
Q ss_pred ecCCCCCCCCCCceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEeCC-CCCCChhhHH-HHHHHHHHHHhCCCEE
Q 012961 268 LGTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPE-AYAHDPENRR-IWNAMYDLLKSMCWKI 345 (452)
Q Consensus 268 ~d~~~lp~~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~-~~~~~~~~~~-~~~~l~~ll~~~Gf~~ 345 (452)
.|.... .+.++||+|++.. ++|++++.+..+.++.+.|+|||++|-.... .-.+.+.... ....+++.+.+-.|.+
T Consensus 105 ~d~~~~-~~~~~~DvVLa~k-~LHlL~~~~~al~~v~~~L~pggvfISfptksl~Gr~~gm~~~Y~~~~~~~~~~~~~~~ 182 (200)
T 3fzg_A 105 LNKESD-VYKGTYDVVFLLK-MLPVLKQQDVNILDFLQLFHTQNFVISFPIKSLSGKEKGMEENYQLWFESFTKGWIKIL 182 (200)
T ss_dssp ECCHHH-HTTSEEEEEEEET-CHHHHHHTTCCHHHHHHTCEEEEEEEEEECCCCC--CTTCCCCHHHHHHHHTTTTSCEE
T ss_pred eccccc-CCCCCcChhhHhh-HHHhhhhhHHHHHHHHHHhCCCCEEEEeChHHhcCCCcchhhhHHHHHHHhccCcceee
Confidence 666444 3457899999776 7888866666777999999999988854311 1112211111 2245666666666665
Q ss_pred EEEE
Q 012961 346 VSKK 349 (452)
Q Consensus 346 v~~~ 349 (452)
-+.+
T Consensus 183 ~~~~ 186 (200)
T 3fzg_A 183 DSKV 186 (200)
T ss_dssp EEEE
T ss_pred eeee
Confidence 5444
No 146
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.12 E-value=5.3e-11 Score=121.86 Aligned_cols=122 Identities=13% Similarity=0.044 Sum_probs=87.5
Q ss_pred CCcccHHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhh---C-CCccccCChhhhhHHHHHH------H
Q 012961 187 HFHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLS---H-DIIAMSLAPNDVHENQIQF------A 256 (452)
Q Consensus 187 ~f~~~~~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~---~-~v~~vdis~~dis~~~~~~------A 256 (452)
.|.......+..+.+.+.. .+..+|||||||+|.++..++. . .++|+|+++.++..+.... +
T Consensus 153 vYGEt~~~~i~~il~~l~l--------~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~ 224 (438)
T 3uwp_A 153 VYGETSFDLVAQMIDEIKM--------TDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWM 224 (438)
T ss_dssp GGGGTHHHHHHHHHHHHCC--------CTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHhcCC--------CCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHH
Confidence 3444455666666666653 2445899999999999988874 2 3788888876554443221 1
Q ss_pred HHcC---CCeEEEEecCCCCCCCC--CCceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012961 257 LERG---IPSTLGVLGTKRLPYPS--RSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSP 318 (452)
Q Consensus 257 ~~rg---~~~~~~~~d~~~lp~~d--~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p 318 (452)
+..+ .++.+..+|+..+++.+ ..||+|+++. .+ |.++....|.++.|+|||||+|++..+
T Consensus 225 ~~~Gl~~~rVefi~GD~~~lp~~d~~~~aDVVf~Nn-~~-F~pdl~~aL~Ei~RvLKPGGrIVssE~ 289 (438)
T 3uwp_A 225 KWYGKKHAEYTLERGDFLSEEWRERIANTSVIFVNN-FA-FGPEVDHQLKERFANMKEGGRIVSSKP 289 (438)
T ss_dssp HHHTBCCCEEEEEECCTTSHHHHHHHHTCSEEEECC-TT-CCHHHHHHHHHHHTTSCTTCEEEESSC
T ss_pred HHhCCCCCCeEEEECcccCCccccccCCccEEEEcc-cc-cCchHHHHHHHHHHcCCCCcEEEEeec
Confidence 2223 46889999999888754 4799999865 33 457778889999999999999998754
No 147
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.12 E-value=4e-10 Score=114.18 Aligned_cols=126 Identities=17% Similarity=0.077 Sum_probs=88.4
Q ss_pred CCCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEeccccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRI 290 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l 290 (452)
...+|||||||+|.++..+++. .++++|+ +.+++.|++. .++.+..+|... |++.+ |+|++.. ++
T Consensus 201 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~------~~~~~~a~~~-~~v~~~~~D~~~-~~p~~--D~v~~~~-vl 269 (364)
T 3p9c_A 201 GLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL------PHVISEAPQF-PGVTHVGGDMFK-EVPSG--DTILMKW-IL 269 (364)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC------HHHHTTCCCC-TTEEEEECCTTT-CCCCC--SEEEEES-CG
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC------HHHHHhhhhc-CCeEEEeCCcCC-CCCCC--CEEEehH-Hh
Confidence 4568999999999999999863 2344444 3344444433 578999999877 77754 9999988 46
Q ss_pred ccccc--HHHHHHHHHHhcCCCcEEEEEeCCCCCC---Chh-------hH-----------HHHHHHHHHHHhCCCEEEE
Q 012961 291 DWLQR--DGILLLELDRLLRPGGYFVYSSPEAYAH---DPE-------NR-----------RIWNAMYDLLKSMCWKIVS 347 (452)
Q Consensus 291 ~~~~d--~~~~L~ei~RvLkPGG~lvi~~p~~~~~---~~~-------~~-----------~~~~~l~~ll~~~Gf~~v~ 347 (452)
|+..+ ...+|++++++|||||+++|.+...... ... +. ...+++.++++++||+.++
T Consensus 270 h~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~ll~~AGF~~v~ 349 (364)
T 3p9c_A 270 HDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALARGAGFTGVK 349 (364)
T ss_dssp GGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHHHHHHTTCCEEE
T ss_pred ccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHHHHHHCCCceEE
Confidence 65443 3579999999999999999987432111 000 00 0125789999999999987
Q ss_pred EEec
Q 012961 348 KKDQ 351 (452)
Q Consensus 348 ~~~~ 351 (452)
....
T Consensus 350 ~~~~ 353 (364)
T 3p9c_A 350 STYI 353 (364)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 6643
No 148
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.12 E-value=1.1e-10 Score=114.11 Aligned_cols=101 Identities=12% Similarity=0.165 Sum_probs=71.5
Q ss_pred CCEEEEECCCCch----HHHHHhhC-C-Cc-cccCChhhhhHHHHHHHHHcC----------------------------
Q 012961 216 IRNVLDVGCGVAS----FGAYLLSH-D-II-AMSLAPNDVHENQIQFALERG---------------------------- 260 (452)
Q Consensus 216 ~~~VLDIGCG~G~----~~~~La~~-~-v~-~vdis~~dis~~~~~~A~~rg---------------------------- 260 (452)
..+|||+|||+|. ++..|++. . .. +..+.+.|+++.+++.|++..
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~ 185 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGL 185 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSE
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCc
Confidence 3589999999997 55555542 1 00 134455555666666665431
Q ss_pred --------CCeEEEEecCCCCCCC-CCCceEEEeccccccccccH--HHHHHHHHHhcCCCcEEEEEe
Q 012961 261 --------IPSTLGVLGTKRLPYP-SRSFELAHCSRCRIDWLQRD--GILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 261 --------~~~~~~~~d~~~lp~~-d~sFDlVv~s~~~l~~~~d~--~~~L~ei~RvLkPGG~lvi~~ 317 (452)
..+.|...|+...|++ .+.||+|+|.+ +++|.++. ..++.+++++|+|||+|++..
T Consensus 186 ~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crn-vliyf~~~~~~~vl~~~~~~L~pgG~L~lg~ 252 (274)
T 1af7_A 186 VRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRN-VMIYFDKTTQEDILRRFVPLLKPDGLLFAGH 252 (274)
T ss_dssp EEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECS-SGGGSCHHHHHHHHHHHGGGEEEEEEEEECT
T ss_pred eeechhhcccCeEEecccCCCCCCcCCCeeEEEECC-chHhCCHHHHHHHHHHHHHHhCCCcEEEEEe
Confidence 1477888888776665 57899999988 56666555 679999999999999999854
No 149
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.11 E-value=6.8e-11 Score=109.62 Aligned_cols=101 Identities=12% Similarity=0.111 Sum_probs=72.9
Q ss_pred CEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcCC---CeEEEEecCCCCC--CCCCC-ceEEEecc
Q 012961 217 RNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI---PSTLGVLGTKRLP--YPSRS-FELAHCSR 287 (452)
Q Consensus 217 ~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg~---~~~~~~~d~~~lp--~~d~s-FDlVv~s~ 287 (452)
.+|||+|||+|.++..++.. .|+++|+++.++..+..+ +...+. ++.+..+|+.++. +++++ ||+|++..
T Consensus 55 ~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~-~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~ 133 (201)
T 2ift_A 55 SECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKN-LQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLDP 133 (201)
T ss_dssp CEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHH-HHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEECC
T ss_pred CeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHH-HHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEECC
Confidence 48999999999999986653 467777777666555432 333343 6888888876643 23578 99999876
Q ss_pred ccccccccHHHHHHHH--HHhcCCCcEEEEEeCCC
Q 012961 288 CRIDWLQRDGILLLEL--DRLLRPGGYFVYSSPEA 320 (452)
Q Consensus 288 ~~l~~~~d~~~~L~ei--~RvLkPGG~lvi~~p~~ 320 (452)
. ++ ..+...+++++ .++|+|||.++++....
T Consensus 134 ~-~~-~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 134 P-FH-FNLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp C-SS-SCHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred C-CC-CccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 3 33 45556788888 67899999999987544
No 150
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.11 E-value=2.9e-10 Score=109.94 Aligned_cols=119 Identities=18% Similarity=0.191 Sum_probs=84.8
Q ss_pred CCCEEEEECCCCchHHHHHhhC-----CCccccCChhhhhHHHHHHHHH-c--CCCeEEEEecCCCCCCCCCCceEEEec
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALE-R--GIPSTLGVLGTKRLPYPSRSFELAHCS 286 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~-----~v~~vdis~~dis~~~~~~A~~-r--g~~~~~~~~d~~~lp~~d~sFDlVv~s 286 (452)
+..+|||+|||+|.++..++.. .++++|+++..+..+....+.. . ..++.+...|+...++++++||+|++.
T Consensus 99 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~D~v~~~ 178 (280)
T 1i9g_A 99 PGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDRAVLD 178 (280)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEEEEEEE
T ss_pred CCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCCceeEEEEC
Confidence 3458999999999999988762 4677777666655444333322 1 246888999988888878899999973
Q ss_pred cccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHh-CCCEEEE
Q 012961 287 RCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKS-MCWKIVS 347 (452)
Q Consensus 287 ~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~-~Gf~~v~ 347 (452)
. +++..++.++.++|+|||++++..+.. ....++...+++ .+|..+.
T Consensus 179 ~------~~~~~~l~~~~~~L~pgG~l~~~~~~~--------~~~~~~~~~l~~~~~f~~~~ 226 (280)
T 1i9g_A 179 M------LAPWEVLDAVSRLLVAGGVLMVYVATV--------TQLSRIVEALRAKQCWTEPR 226 (280)
T ss_dssp S------SCGGGGHHHHHHHEEEEEEEEEEESSH--------HHHHHHHHHHHHHSSBCCCE
T ss_pred C------cCHHHHHHHHHHhCCCCCEEEEEeCCH--------HHHHHHHHHHHhcCCcCCcE
Confidence 2 345578999999999999999988642 123344444555 7886544
No 151
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.09 E-value=1.7e-10 Score=104.14 Aligned_cols=132 Identities=13% Similarity=0.038 Sum_probs=87.9
Q ss_pred eeecCCCCCCCcccHHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHH
Q 012961 178 KINFPGGGTHFHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQ 254 (452)
Q Consensus 178 ~~~F~g~g~~f~~~~~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~ 254 (452)
.+.++.+ ..+.+..+.+.+.+.+.+... .+..+|||+|||+|.++..++.. .|+++|+++..+..+..+
T Consensus 15 ~~~~~~~-~~~rp~~~~~~~~~~~~l~~~-------~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~ 86 (187)
T 2fhp_A 15 RLKALDG-DNTRPTTDKVKESIFNMIGPY-------FDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKEN 86 (187)
T ss_dssp BCCCCCC-CSSCCCCHHHHHHHHHHHCSC-------CSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHH
T ss_pred cccCCCC-CCcCcCHHHHHHHHHHHHHhh-------cCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHH
Confidence 3444433 245566677777777776421 23458999999999999988753 467777776666544432
Q ss_pred HHHHcCC--CeEEEEecCCCC----CCCCCCceEEEeccccccccccHHHHHHHH--HHhcCCCcEEEEEeCCC
Q 012961 255 FALERGI--PSTLGVLGTKRL----PYPSRSFELAHCSRCRIDWLQRDGILLLEL--DRLLRPGGYFVYSSPEA 320 (452)
Q Consensus 255 ~A~~rg~--~~~~~~~d~~~l----p~~d~sFDlVv~s~~~l~~~~d~~~~L~ei--~RvLkPGG~lvi~~p~~ 320 (452)
. ...+. ++.+..+|+... ++.+++||+|++... ++ .......+..+ .++|+|||.+++..+..
T Consensus 87 ~-~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~~~-~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 87 I-AITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLDPP-YA-KQEIVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp H-HHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCC-GG-GCCHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred H-HHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEECCC-CC-chhHHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 2 23343 478888886553 223578999998753 33 34456677777 89999999999987654
No 152
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.09 E-value=6.5e-10 Score=104.24 Aligned_cols=129 Identities=12% Similarity=0.158 Sum_probs=82.3
Q ss_pred CCCEEEEECCCCchHHHHHhh-----CCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC---CCCCCceEEEec
Q 012961 215 NIRNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP---YPSRSFELAHCS 286 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~-----~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp---~~d~sFDlVv~s 286 (452)
+..+|||+|||+|.++..|++ ..|+++|+++.++..+. +.+++. .++.+..+|+.... ...++||+|++.
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~-~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~D~v~~~ 150 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELV-PIVEER-RNIVPILGDATKPEEYRALVPKVDVIFED 150 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHH-HHHSSC-TTEEEEECCTTCGGGGTTTCCCEEEEEEC
T ss_pred CCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHH-HHHhcc-CCCEEEEccCCCcchhhcccCCceEEEEC
Confidence 345899999999999999885 35677777665553332 333322 56888888877631 123589999976
Q ss_pred cccccccccHHHHHHHHHHhcCCCcEEEEEeCCCC-CCChhhHHHH-HHHHHHHHhCCCEEEEEEe
Q 012961 287 RCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAY-AHDPENRRIW-NAMYDLLKSMCWKIVSKKD 350 (452)
Q Consensus 287 ~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~-~~~~~~~~~~-~~l~~ll~~~Gf~~v~~~~ 350 (452)
.. .......++.++.++|||||++++...... .......... +++..+ ++. |+++....
T Consensus 151 ~~---~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~-f~~~~~~~ 211 (227)
T 1g8a_A 151 VA---QPTQAKILIDNAEVYLKRGGYGMIAVKSRSIDVTKEPEQVFREVEREL-SEY-FEVIERLN 211 (227)
T ss_dssp CC---STTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCTTSCHHHHHHHHHHHH-HTT-SEEEEEEE
T ss_pred CC---CHhHHHHHHHHHHHhcCCCCEEEEEEecCCCCCCCChhhhhHHHHHHH-Hhh-ceeeeEec
Confidence 42 222224469999999999999998743211 1111111223 456666 666 99886654
No 153
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.08 E-value=6.8e-10 Score=108.39 Aligned_cols=130 Identities=12% Similarity=0.075 Sum_probs=83.7
Q ss_pred CCEEEEECCCCchHHHHHhhC---CCccccC-ChhhhhHHHHHHH----HHcCC------CeEEEEecCCCCC--C----
Q 012961 216 IRNVLDVGCGVASFGAYLLSH---DIIAMSL-APNDVHENQIQFA----LERGI------PSTLGVLGTKRLP--Y---- 275 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~---~v~~vdi-s~~dis~~~~~~A----~~rg~------~~~~~~~d~~~lp--~---- 275 (452)
..+|||||||+|.++..++.. .|+++|+ ++..+..+..+.. ...+. ++.+...+..+.. +
T Consensus 80 ~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 159 (281)
T 3bzb_A 80 GKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRCT 159 (281)
T ss_dssp TCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHHH
T ss_pred CCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhhc
Confidence 458999999999999988863 5777777 6666554443221 22221 4556655533321 1
Q ss_pred CCCCceEEEeccccccccccHHHHHHHHHHhcC---C--CcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCC-CEEEEEE
Q 012961 276 PSRSFELAHCSRCRIDWLQRDGILLLELDRLLR---P--GGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMC-WKIVSKK 349 (452)
Q Consensus 276 ~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLk---P--GG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~G-f~~v~~~ 349 (452)
++++||+|+++. ++++..+...+++++.++|+ | ||.+++......... .....++.+.+++.| |++....
T Consensus 160 ~~~~fD~Ii~~d-vl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~~---~~~~~~~~~~l~~~G~f~v~~~~ 235 (281)
T 3bzb_A 160 GLQRFQVVLLAD-LLSFHQAHDALLRSVKMLLALPANDPTAVALVTFTHHRPHL---AERDLAFFRLVNADGALIAEPWL 235 (281)
T ss_dssp SCSSBSEEEEES-CCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC-----------CTHHHHHHHHSTTEEEEEEE
T ss_pred cCCCCCEEEEeC-cccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEEeeeccc---chhHHHHHHHHHhcCCEEEEEec
Confidence 357899999877 56677888899999999999 9 998877543221100 011235666788999 9887654
No 154
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.08 E-value=3.5e-10 Score=115.17 Aligned_cols=99 Identities=15% Similarity=0.195 Sum_probs=76.3
Q ss_pred CCCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcCCC--eEEEEecCCCCCCCCCCceEEEecccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGIP--STLGVLGTKRLPYPSRSFELAHCSRCR 289 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg~~--~~~~~~d~~~lp~~d~sFDlVv~s~~~ 289 (452)
+..+|||||||+|.++..+++. .|+++|++ .++..+. +.+...+.. +.+..+|+.+++++ ++||+|++.. +
T Consensus 63 ~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~-~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~Iv~~~-~ 138 (376)
T 3r0q_C 63 EGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHAR-ALVKANNLDHIVEVIEGSVEDISLP-EKVDVIISEW-M 138 (376)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHH-HHHHHTTCTTTEEEEESCGGGCCCS-SCEEEEEECC-C
T ss_pred CCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHH-HHHHHcCCCCeEEEEECchhhcCcC-CcceEEEEcC-h
Confidence 4468999999999999999874 67888888 6664443 444444543 88999999999887 8899999854 2
Q ss_pred cccc---ccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 290 IDWL---QRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 290 l~~~---~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
.++. .....++.++.++|||||++++..
T Consensus 139 ~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 139 GYFLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp BTTBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred hhcccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 3333 456779999999999999998643
No 155
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.07 E-value=2.5e-10 Score=107.14 Aligned_cols=107 Identities=12% Similarity=0.128 Sum_probs=74.8
Q ss_pred HHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHcCC---CeEEEEe
Q 012961 194 KYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGI---PSTLGVL 268 (452)
Q Consensus 194 ~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg~---~~~~~~~ 268 (452)
...+.+.+.+.. .+..+|||||||+|.++..+++. .++++|++ +.+++.|+++.. ++.+...
T Consensus 57 ~~~~~~~~~~~~--------~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~-----~~~~~~a~~~~~~~~~v~~~~~ 123 (231)
T 1vbf_A 57 NLGIFMLDELDL--------HKGQKVLEIGTGIGYYTALIAEIVDKVVSVEIN-----EKMYNYASKLLSYYNNIKLILG 123 (231)
T ss_dssp HHHHHHHHHTTC--------CTTCEEEEECCTTSHHHHHHHHHSSEEEEEESC-----HHHHHHHHHHHTTCSSEEEEES
T ss_pred HHHHHHHHhcCC--------CCCCEEEEEcCCCCHHHHHHHHHcCEEEEEeCC-----HHHHHHHHHHHhhcCCeEEEEC
Confidence 445555555542 23458999999999999999874 45556554 445555554421 6888888
Q ss_pred cCCCCCCCCCCceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012961 269 GTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEA 320 (452)
Q Consensus 269 d~~~lp~~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~ 320 (452)
|.......+++||+|++.. .++++. .++.++|+|||++++..+..
T Consensus 124 d~~~~~~~~~~fD~v~~~~-~~~~~~------~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 124 DGTLGYEEEKPYDRVVVWA-TAPTLL------CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp CGGGCCGGGCCEEEEEESS-BBSSCC------HHHHHTEEEEEEEEEEECSS
T ss_pred CcccccccCCCccEEEECC-cHHHHH------HHHHHHcCCCcEEEEEEcCC
Confidence 8776333457899999887 466543 47899999999999987643
No 156
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.06 E-value=2.8e-10 Score=105.51 Aligned_cols=122 Identities=11% Similarity=-0.042 Sum_probs=80.6
Q ss_pred CcccHHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcCC-Ce
Q 012961 188 FHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI-PS 263 (452)
Q Consensus 188 f~~~~~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg~-~~ 263 (452)
+.+..+...+.+.+.+... .+..+|||+|||+|.++..++.. .|+++|+++.++..+.. .+...+. ++
T Consensus 34 ~rp~~~~~~~~l~~~l~~~-------~~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~-~~~~~~~~~v 105 (202)
T 2fpo_A 34 LRPTTDRVRETLFNWLAPV-------IVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIK-NLATLKAGNA 105 (202)
T ss_dssp ----CHHHHHHHHHHHHHH-------HTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHH-HHHHTTCCSE
T ss_pred CCCCHHHHHHHHHHHHHhh-------cCCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHH-HHHHcCCCcE
Confidence 4444555666565555420 02348999999999999986653 56777777766655442 3333343 68
Q ss_pred EEEEecCCC-CCCCCCCceEEEeccccccccccHHHHHHHHHH--hcCCCcEEEEEeCC
Q 012961 264 TLGVLGTKR-LPYPSRSFELAHCSRCRIDWLQRDGILLLELDR--LLRPGGYFVYSSPE 319 (452)
Q Consensus 264 ~~~~~d~~~-lp~~d~sFDlVv~s~~~l~~~~d~~~~L~ei~R--vLkPGG~lvi~~p~ 319 (452)
.+..+|+.+ ++..+++||+|++... ++ ......+++++.+ +|+|||+++++...
T Consensus 106 ~~~~~D~~~~~~~~~~~fD~V~~~~p-~~-~~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 106 RVVNSNAMSFLAQKGTPHNIVFVDPP-FR-RGLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp EEECSCHHHHHSSCCCCEEEEEECCS-SS-TTTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred EEEECCHHHHHhhcCCCCCEEEECCC-CC-CCcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 888888766 4666678999998753 33 3455678888865 59999999998754
No 157
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.05 E-value=1e-10 Score=103.94 Aligned_cols=123 Identities=19% Similarity=0.224 Sum_probs=80.4
Q ss_pred CcccHHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHcCCCeEE
Q 012961 188 FHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTL 265 (452)
Q Consensus 188 f~~~~~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg~~~~~ 265 (452)
+.+..+...+.+.+.+.. .+ .+..+|||+|||+|.++..++.. .++++|+++.++..+..+. ...+.++.+
T Consensus 20 ~~~~~~~~~~~~~~~~~~---~~---~~~~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~~~ 92 (171)
T 1ws6_A 20 ARPSPVRLRKALFDYLRL---RY---PRRGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENV-RRTGLGARV 92 (171)
T ss_dssp CCCCCHHHHHHHHHHHHH---HC---TTCCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHHH-HHHTCCCEE
T ss_pred CCCCHHHHHHHHHHHHHh---hc---cCCCeEEEeCCCcCHHHHHHHHCCCeEEEEeCCHHHHHHHHHHH-HHcCCceEE
Confidence 444555666666655542 01 12348999999999999999874 3667776666554444322 223447888
Q ss_pred EEecCCCC-C-C--CCCCceEEEeccccccccccHHHHHHHHH--HhcCCCcEEEEEeCCC
Q 012961 266 GVLGTKRL-P-Y--PSRSFELAHCSRCRIDWLQRDGILLLELD--RLLRPGGYFVYSSPEA 320 (452)
Q Consensus 266 ~~~d~~~l-p-~--~d~sFDlVv~s~~~l~~~~d~~~~L~ei~--RvLkPGG~lvi~~p~~ 320 (452)
...|+.+. + . ..++||+|++... ++ .+...+++.+. ++|+|||.++++.+..
T Consensus 93 ~~~d~~~~~~~~~~~~~~~D~i~~~~~-~~--~~~~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 93 VALPVEVFLPEAKAQGERFTVAFMAPP-YA--MDLAALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp ECSCHHHHHHHHHHTTCCEEEEEECCC-TT--SCTTHHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred EeccHHHHHHhhhccCCceEEEEECCC-Cc--hhHHHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 88886652 2 1 1247999998752 33 44456677777 9999999999987654
No 158
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.05 E-value=8.6e-10 Score=106.96 Aligned_cols=120 Identities=13% Similarity=0.118 Sum_probs=85.5
Q ss_pred CCCEEEEECCCCchHHHHHhhC-----CCccccCChhhhhHHHHHHHHHcCC--CeEEEEecCCCCCCCCCCceEEEecc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSR 287 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~-----~v~~vdis~~dis~~~~~~A~~rg~--~~~~~~~d~~~lp~~d~sFDlVv~s~ 287 (452)
+..+|||+|||+|.++..++.. .++++|+++..+..+.. .+...+. ++.+...|+... +++++||+|++..
T Consensus 112 ~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~-~~~~~~~~~~v~~~~~d~~~~-~~~~~~D~V~~~~ 189 (277)
T 1o54_A 112 EGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAES-NLTKWGLIERVTIKVRDISEG-FDEKDVDALFLDV 189 (277)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHH-HHHHTTCGGGEEEECCCGGGC-CSCCSEEEEEECC
T ss_pred CCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHH-HHHHcCCCCCEEEEECCHHHc-ccCCccCEEEECC
Confidence 3458999999999999988753 45666666555443332 2222243 578888887766 6667899999742
Q ss_pred ccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEEEe
Q 012961 288 CRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKD 350 (452)
Q Consensus 288 ~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~ 350 (452)
+++..++.++.++|+|||.+++..+.. ....++.+.+++.||..+....
T Consensus 190 ------~~~~~~l~~~~~~L~pgG~l~~~~~~~--------~~~~~~~~~l~~~gf~~~~~~~ 238 (277)
T 1o54_A 190 ------PDPWNYIDKCWEALKGGGRFATVCPTT--------NQVQETLKKLQELPFIRIEVWE 238 (277)
T ss_dssp ------SCGGGTHHHHHHHEEEEEEEEEEESSH--------HHHHHHHHHHHHSSEEEEEEEC
T ss_pred ------cCHHHHHHHHHHHcCCCCEEEEEeCCH--------HHHHHHHHHHHHCCCceeEEEE
Confidence 455678999999999999999987532 2245677778889998776543
No 159
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.05 E-value=5.7e-10 Score=110.74 Aligned_cols=110 Identities=9% Similarity=0.051 Sum_probs=77.7
Q ss_pred HHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC--C---CccccCChhhhhHHHHHHHHHcC-CCeEEEE
Q 012961 194 KYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH--D---IIAMSLAPNDVHENQIQFALERG-IPSTLGV 267 (452)
Q Consensus 194 ~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~--~---v~~vdis~~dis~~~~~~A~~rg-~~~~~~~ 267 (452)
...+.+.+.+.. .+..+|||||||+|.++..+++. . |+++|+++..+..+. +.+...+ .++.+..
T Consensus 62 ~~~~~l~~~l~~--------~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~-~~~~~~g~~~v~~~~ 132 (317)
T 1dl5_A 62 SLMALFMEWVGL--------DKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAK-RNVERLGIENVIFVC 132 (317)
T ss_dssp HHHHHHHHHTTC--------CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHH-HHHHHTTCCSEEEEE
T ss_pred HHHHHHHHhcCC--------CCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHH-HHHHHcCCCCeEEEE
Confidence 444555555542 23458999999999999999863 3 777777766654443 2222334 3488888
Q ss_pred ecCCCCCCCCCCceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012961 268 LGTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPE 319 (452)
Q Consensus 268 ~d~~~lp~~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~ 319 (452)
.|....+.++++||+|++.. .++++. .++.++|||||+++++..+
T Consensus 133 ~d~~~~~~~~~~fD~Iv~~~-~~~~~~------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 133 GDGYYGVPEFSPYDVIFVTV-GVDEVP------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp SCGGGCCGGGCCEEEEEECS-BBSCCC------HHHHHHEEEEEEEEEEBCB
T ss_pred CChhhccccCCCeEEEEEcC-CHHHHH------HHHHHhcCCCcEEEEEECC
Confidence 99877655567899999887 466544 5788999999999998654
No 160
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.04 E-value=1.1e-09 Score=110.30 Aligned_cols=122 Identities=16% Similarity=0.063 Sum_probs=87.3
Q ss_pred CCCEEEEECCCCchHHHHHhh-----CCCccccCChhhhhHHHHHHHHHcCC-CeEEEEecCCCCCCCCCCceEEEeccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGI-PSTLGVLGTKRLPYPSRSFELAHCSRC 288 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~-----~~v~~vdis~~dis~~~~~~A~~rg~-~~~~~~~d~~~lp~~d~sFDlVv~s~~ 288 (452)
+..+|||+|||+|.++..++. ..++++|+++.++..+. +.+...+. .+.+.+.|+.+++.+.+.||+|+++..
T Consensus 203 ~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~-~n~~~~g~~~i~~~~~D~~~~~~~~~~~D~Ii~npP 281 (354)
T 3tma_A 203 PGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAR-EAALASGLSWIRFLRADARHLPRFFPEVDRILANPP 281 (354)
T ss_dssp TTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHH-HHHHHTTCTTCEEEECCGGGGGGTCCCCSEEEECCC
T ss_pred CCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHH-HHHHHcCCCceEEEeCChhhCccccCCCCEEEECCC
Confidence 345799999999999988875 46778887777765554 33334454 589999999998877778999998532
Q ss_pred c-------ccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEEE
Q 012961 289 R-------IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 349 (452)
Q Consensus 289 ~-------l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~ 349 (452)
. .+.......+++++.++|+|||.+++.++.. +.+..+.+ .||+.....
T Consensus 282 yg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~-----------~~~~~~~~-~g~~~~~~~ 337 (354)
T 3tma_A 282 HGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLRP-----------ALLKRALP-PGFALRHAR 337 (354)
T ss_dssp SCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCH-----------HHHHHHCC-TTEEEEEEE
T ss_pred CcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCH-----------HHHHHHhh-cCcEEEEEE
Confidence 1 1111122568999999999999999987532 22445555 899876654
No 161
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.04 E-value=5.6e-10 Score=111.51 Aligned_cols=98 Identities=18% Similarity=0.246 Sum_probs=74.3
Q ss_pred CCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcCC--CeEEEEecCCCCCCCCCCceEEEeccc--
Q 012961 216 IRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRC-- 288 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg~--~~~~~~~d~~~lp~~d~sFDlVv~s~~-- 288 (452)
..+|||||||+|.++..+++. .|+++|+++ ++..+ .+.+...+. ++.+..+|+.++++++++||+|++...
T Consensus 39 ~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s~-~~~~a-~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~ 116 (328)
T 1g6q_1 39 DKIVLDVGCGTGILSMFAAKHGAKHVIGVDMSS-IIEMA-KELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMGY 116 (328)
T ss_dssp TCEEEEETCTTSHHHHHHHHTCCSEEEEEESST-HHHHH-HHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCBT
T ss_pred CCEEEEecCccHHHHHHHHHCCCCEEEEEChHH-HHHHH-HHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCchh
Confidence 358999999999999998864 578888873 44333 334444443 488999999999888889999998641
Q ss_pred cccccccHHHHHHHHHHhcCCCcEEEE
Q 012961 289 RIDWLQRDGILLLELDRLLRPGGYFVY 315 (452)
Q Consensus 289 ~l~~~~d~~~~L~ei~RvLkPGG~lvi 315 (452)
.+.+......++.++.++|||||.++.
T Consensus 117 ~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 117 FLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp TBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred hcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 233345567899999999999999983
No 162
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.04 E-value=9.4e-10 Score=102.03 Aligned_cols=99 Identities=13% Similarity=0.039 Sum_probs=68.1
Q ss_pred CCCEEEEECCCCchHHHHHhh-----CCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEecccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCR 289 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~-----~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~ 289 (452)
+..+|||||||+|.++..++. ..++++|+++..+..+..........++.+...|.......+++||+|++.. .
T Consensus 77 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~-~ 155 (215)
T 2yxe_A 77 PGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLAPYDRIYTTA-A 155 (215)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGCCEEEEEESS-B
T ss_pred CCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCCCeeEEEECC-c
Confidence 345899999999999998875 3466666666555444322222212357788888643222257899999887 4
Q ss_pred ccccccHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012961 290 IDWLQRDGILLLELDRLLRPGGYFVYSSPEA 320 (452)
Q Consensus 290 l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~ 320 (452)
+++.. .++.++|||||++++..+..
T Consensus 156 ~~~~~------~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 156 GPKIP------EPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp BSSCC------HHHHHTEEEEEEEEEEESSS
T ss_pred hHHHH------HHHHHHcCCCcEEEEEECCC
Confidence 55544 48899999999999987643
No 163
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.03 E-value=2.7e-09 Score=102.05 Aligned_cols=98 Identities=13% Similarity=0.113 Sum_probs=69.8
Q ss_pred CCEEEEECCCCchHHHHHhhC-----CCccccCChhhhhHHHHHHHHHcCC--CeEEEEecCCC-CCCC--CCCceEEEe
Q 012961 216 IRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKR-LPYP--SRSFELAHC 285 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~-----~v~~vdis~~dis~~~~~~A~~rg~--~~~~~~~d~~~-lp~~--d~sFDlVv~ 285 (452)
+.+|||||||+|..+..|++. .|+++|+++..+..+.. .+.+.+. ++.+..+|+.+ ++.. .++||+|++
T Consensus 64 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~-~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~ 142 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARE-NLQLAGVDQRVTLREGPALQSLESLGECPAFDLIFI 142 (248)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHH-HHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEEE
T ss_pred CCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH-HHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEEE
Confidence 358999999999999999864 46667666655544432 2222343 58888888655 3322 348999997
Q ss_pred ccccccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012961 286 SRCRIDWLQRDGILLLELDRLLRPGGYFVYSSP 318 (452)
Q Consensus 286 s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p 318 (452)
.. ...+...+++++.++|||||++++...
T Consensus 143 d~----~~~~~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 143 DA----DKPNNPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp CS----CGGGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred CC----chHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 54 234556799999999999999998764
No 164
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.03 E-value=1.7e-10 Score=103.70 Aligned_cols=120 Identities=17% Similarity=0.063 Sum_probs=75.9
Q ss_pred cHHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcCC--CeEE
Q 012961 191 GADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI--PSTL 265 (452)
Q Consensus 191 ~~~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg~--~~~~ 265 (452)
..+...+.+.+.+... .+..+|||+|||+|.++..++.. .++++|+++.++..+. +.+...+. ++.+
T Consensus 14 ~~~~~~~~~~~~l~~~-------~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~-~~~~~~~~~~~~~~ 85 (177)
T 2esr_A 14 TSDKVRGAIFNMIGPY-------FNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQ-DNIIMTKAENRFTL 85 (177)
T ss_dssp ----CHHHHHHHHCSC-------CCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHH-HHHHTTTCGGGEEE
T ss_pred CHHHHHHHHHHHHHhh-------cCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHH-HHHHHcCCCCceEE
Confidence 3344455555555411 23458999999999999988864 4666666665554333 22222333 4778
Q ss_pred EEecCCC-CCCCCCCceEEEeccccccccccHHHHHHHHH--HhcCCCcEEEEEeCCC
Q 012961 266 GVLGTKR-LPYPSRSFELAHCSRCRIDWLQRDGILLLELD--RLLRPGGYFVYSSPEA 320 (452)
Q Consensus 266 ~~~d~~~-lp~~d~sFDlVv~s~~~l~~~~d~~~~L~ei~--RvLkPGG~lvi~~p~~ 320 (452)
...|+.+ ++..+++||+|++.. .++ ......+++.+. ++|+|||++++..+..
T Consensus 86 ~~~d~~~~~~~~~~~fD~i~~~~-~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 86 LKMEAERAIDCLTGRFDLVFLDP-PYA-KETIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp ECSCHHHHHHHBCSCEEEEEECC-SSH-HHHHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred EECcHHHhHHhhcCCCCEEEECC-CCC-cchHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 8888665 343346799999865 232 234456777776 9999999999987553
No 165
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.03 E-value=1e-09 Score=109.01 Aligned_cols=126 Identities=19% Similarity=0.143 Sum_probs=84.6
Q ss_pred CCCEEEEECCCCchHHHHHhh-----CCCccccCChhhhhHHHHHHHHHcCC-CeEEEEecCCCCCCCCCCceEEEecc-
Q 012961 215 NIRNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGI-PSTLGVLGTKRLPYPSRSFELAHCSR- 287 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~-----~~v~~vdis~~dis~~~~~~A~~rg~-~~~~~~~d~~~lp~~d~sFDlVv~s~- 287 (452)
+..+|||+|||+|..+..|++ ..|+++|+++..+..+..+ +...+. ++.+...|+..++..+++||+|++..
T Consensus 118 ~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~-~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d~P 196 (315)
T 1ixk_A 118 PGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLN-LSRLGVLNVILFHSSSLHIGELNVEFDKILLDAP 196 (315)
T ss_dssp TTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHH-HHHHTCCSEEEESSCGGGGGGGCCCEEEEEEECC
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHH-HHHhCCCeEEEEECChhhcccccccCCEEEEeCC
Confidence 345899999999999999885 2477777777666544433 223344 67888888887765457899999731
Q ss_pred ----cccccccc----------------HHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEE
Q 012961 288 ----CRIDWLQR----------------DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIV 346 (452)
Q Consensus 288 ----~~l~~~~d----------------~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v 346 (452)
.+++..++ ...+|+++.++|||||++++++-.... .++ -..+..++++.+|+.+
T Consensus 197 csg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~--~En---e~~v~~~l~~~~~~~~ 270 (315)
T 1ixk_A 197 CTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEP--EEN---EFVIQWALDNFDVELL 270 (315)
T ss_dssp TTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCG--GGT---HHHHHHHHHHSSEEEE
T ss_pred CCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCCh--HHh---HHHHHHHHhcCCCEEe
Confidence 12222111 146899999999999999998744321 111 2346677788888765
No 166
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.03 E-value=1.2e-10 Score=118.83 Aligned_cols=93 Identities=13% Similarity=0.121 Sum_probs=74.0
Q ss_pred CCCEEEEECCC------CchHHHHHhh-----CCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCC------C
Q 012961 215 NIRNVLDVGCG------VASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYP------S 277 (452)
Q Consensus 215 ~~~~VLDIGCG------~G~~~~~La~-----~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~------d 277 (452)
+..+||||||| +|..+..++. ..|+++|+++.+. ....++.+.++|+.++++. +
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~---------~~~~rI~fv~GDa~dlpf~~~l~~~d 286 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH---------VDELRIRTIQGDQNDAEFLDRIARRY 286 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG---------GCBTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh---------hcCCCcEEEEecccccchhhhhhccc
Confidence 34689999999 6666666653 3678888887652 2346789999999998877 6
Q ss_pred CCceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012961 278 RSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSP 318 (452)
Q Consensus 278 ~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p 318 (452)
++||+|+|.. .|+..+...+|+++.|+|||||++++.+.
T Consensus 287 ~sFDlVisdg--sH~~~d~~~aL~el~rvLKPGGvlVi~Dl 325 (419)
T 3sso_A 287 GPFDIVIDDG--SHINAHVRTSFAALFPHVRPGGLYVIEDM 325 (419)
T ss_dssp CCEEEEEECS--CCCHHHHHHHHHHHGGGEEEEEEEEEECG
T ss_pred CCccEEEECC--cccchhHHHHHHHHHHhcCCCeEEEEEec
Confidence 8999999864 45667778899999999999999999874
No 167
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.02 E-value=1.1e-09 Score=104.37 Aligned_cols=119 Identities=16% Similarity=0.168 Sum_probs=80.4
Q ss_pred CCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHc-------C-CCeEEEEecCCC-CC--CCCCCc
Q 012961 216 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALER-------G-IPSTLGVLGTKR-LP--YPSRSF 280 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~r-------g-~~~~~~~~d~~~-lp--~~d~sF 280 (452)
..+|||||||+|.++..++.. .++++|+++..+..+.......+ + .++.+..+|+.. ++ +++++|
T Consensus 50 ~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~~ 129 (246)
T 2vdv_E 50 KVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQL 129 (246)
T ss_dssp CEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTCE
T ss_pred CCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccccc
Confidence 348999999999999999863 47788777776655543332220 3 468889999876 55 777899
Q ss_pred eEEEecccccccccc--------HHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCC
Q 012961 281 ELAHCSRCRIDWLQR--------DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCW 343 (452)
Q Consensus 281 DlVv~s~~~l~~~~d--------~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf 343 (452)
|.|+.... -.|... ...++.++.++|+|||+|++.+.. ....+.+.+.+...++
T Consensus 130 d~v~~~~p-~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~--------~~~~~~~~~~~~~~~~ 191 (246)
T 2vdv_E 130 SKMFFCFP-DPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDV--------KDLHEWMVKHLEEHPL 191 (246)
T ss_dssp EEEEEESC-CCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESC--------HHHHHHHHHHHHHSTT
T ss_pred CEEEEECC-CcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEecc--------HHHHHHHHHHHHhCcC
Confidence 99985431 122110 047999999999999999996522 1223455666677664
No 168
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.02 E-value=1.5e-11 Score=116.39 Aligned_cols=98 Identities=15% Similarity=0.160 Sum_probs=74.0
Q ss_pred CCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHcCC--CeEEEEecCCCCCCCCCCceEEEecccccc
Q 012961 216 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCRID 291 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg~--~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~ 291 (452)
..+|||+|||+|.++..++.. .|+++|+++.++..+. +.+...+. ++.+..+|+..++ ++++||+|++.. .++
T Consensus 79 ~~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~-~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~-~~~ 155 (241)
T 3gdh_A 79 CDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALAR-NNAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSP-PWG 155 (241)
T ss_dssp CSEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECC-CCS
T ss_pred CCEEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHH-HHHHHcCCCcCeEEEECChHHhc-ccCCCCEEEECC-CcC
Confidence 358999999999999999874 5666766666554443 22333353 6889999987776 557999999876 566
Q ss_pred ccccHHHHHHHHHHhcCCCcEEEEE
Q 012961 292 WLQRDGILLLELDRLLRPGGYFVYS 316 (452)
Q Consensus 292 ~~~d~~~~L~ei~RvLkPGG~lvi~ 316 (452)
+..+....+.++.++|+|||.+++.
T Consensus 156 ~~~~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 156 GPDYATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp SGGGGGSSSBCTTTSCSSCHHHHHH
T ss_pred CcchhhhHHHHHHhhcCCcceeHHH
Confidence 6666666788999999999997763
No 169
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.02 E-value=1.5e-09 Score=108.85 Aligned_cols=128 Identities=7% Similarity=0.016 Sum_probs=84.5
Q ss_pred CCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHcCC---CeEEEEecCCCCCC----CCCCceEEEec
Q 012961 216 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGI---PSTLGVLGTKRLPY----PSRSFELAHCS 286 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg~---~~~~~~~d~~~lp~----~d~sFDlVv~s 286 (452)
..+|||+|||+|.++..++.. .|+++|+++.++..+..+... .+. ++.+...|+..+.. .+++||+|++.
T Consensus 154 ~~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~~al~~a~~n~~~-~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~d 232 (332)
T 2igt_A 154 PLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQVL-AGLEQAPIRWICEDAMKFIQREERRGSTYDIILTD 232 (332)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHH-HTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEEC
T ss_pred CCcEEEcccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHH-cCCCccceEEEECcHHHHHHHHHhcCCCceEEEEC
Confidence 458999999999999999864 566777766666554433322 243 37888888765421 14689999984
Q ss_pred cc---------cccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEE
Q 012961 287 RC---------RIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIV 346 (452)
Q Consensus 287 ~~---------~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v 346 (452)
.- ++++..+...++.++.++|+|||++++........... ...+.+.+.++++|+++.
T Consensus 233 PP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~--~~~~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 233 PPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRASFY--SMHELMRETMRGAGGVVA 299 (332)
T ss_dssp CCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHH--HHHHHHHHHTTTSCSEEE
T ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHH--HHHHHHHHHHHHcCCeEE
Confidence 21 12334456779999999999999988766443222211 122344556678899876
No 170
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.02 E-value=7.2e-10 Score=114.81 Aligned_cols=102 Identities=7% Similarity=-0.033 Sum_probs=73.3
Q ss_pred CCCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHH--HHHHHH----HcC---CCeEEEEecCCCC--CC--CC
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHEN--QIQFAL----ERG---IPSTLGVLGTKRL--PY--PS 277 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~--~~~~A~----~rg---~~~~~~~~d~~~l--p~--~d 277 (452)
+..+|||||||+|.++..++.. .|+|+|+++..+..+ |++.++ ..+ .++.+..+|.... ++ ..
T Consensus 242 ~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~~~~ 321 (433)
T 1u2z_A 242 KGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAELI 321 (433)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHHHHG
T ss_pred CCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCcccccccccccc
Confidence 4458999999999999999862 488888888766555 333333 234 3577777654322 12 24
Q ss_pred CCceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012961 278 RSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSP 318 (452)
Q Consensus 278 ~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p 318 (452)
++||+|+++.. + +.++...+|.++.++|||||.+++..+
T Consensus 322 ~~FDvIvvn~~-l-~~~d~~~~L~el~r~LKpGG~lVi~d~ 360 (433)
T 1u2z_A 322 PQCDVILVNNF-L-FDEDLNKKVEKILQTAKVGCKIISLKS 360 (433)
T ss_dssp GGCSEEEECCT-T-CCHHHHHHHHHHHTTCCTTCEEEESSC
T ss_pred CCCCEEEEeCc-c-ccccHHHHHHHHHHhCCCCeEEEEeec
Confidence 68999998753 3 446777789999999999999998753
No 171
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.01 E-value=1.6e-09 Score=109.25 Aligned_cols=129 Identities=16% Similarity=0.090 Sum_probs=87.8
Q ss_pred CCCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHc-----CCCeEEEEecCCCCCCCCCCceEEEecc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALER-----GIPSTLGVLGTKRLPYPSRSFELAHCSR 287 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~r-----g~~~~~~~~d~~~lp~~d~sFDlVv~s~ 287 (452)
...+|||||||+|.++..++++ .+.++ ..|+ +..++.|++. ..++.+..+|....|.+ .+|+|++..
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~p~~~~~---~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~--~~D~~~~~~ 252 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLYPGCKIT---VFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLP--EADLYILAR 252 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHCSSCEEE---EEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCCC--CCSEEEEES
T ss_pred cCCeEEeeCCCCCHHHHHHHHhCCCceeE---eccC-HHHHHHHHHhhhhcccCceeeecCccccCCCC--CceEEEeee
Confidence 3458999999999999999874 22221 1232 3344555443 24688999997766655 479999988
Q ss_pred ccccccccH--HHHHHHHHHhcCCCcEEEEEeCCCCC--CChhhH---------------HHHHHHHHHHHhCCCEEEEE
Q 012961 288 CRIDWLQRD--GILLLELDRLLRPGGYFVYSSPEAYA--HDPENR---------------RIWNAMYDLLKSMCWKIVSK 348 (452)
Q Consensus 288 ~~l~~~~d~--~~~L~ei~RvLkPGG~lvi~~p~~~~--~~~~~~---------------~~~~~l~~ll~~~Gf~~v~~ 348 (452)
. +|..+|. ..+|++++++|+|||+++|.+.-... ..+... +..+++.++++++||+.++.
T Consensus 253 v-lh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll~~AGf~~v~v 331 (353)
T 4a6d_A 253 V-LHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHMLLSSAGFRDFQF 331 (353)
T ss_dssp S-GGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTCEEEEE
T ss_pred e-cccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHCCCceEEE
Confidence 4 5554554 56899999999999999998753211 111111 12358899999999998876
Q ss_pred Ee
Q 012961 349 KD 350 (452)
Q Consensus 349 ~~ 350 (452)
..
T Consensus 332 ~~ 333 (353)
T 4a6d_A 332 KK 333 (353)
T ss_dssp EC
T ss_pred EE
Confidence 54
No 172
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.01 E-value=3.8e-10 Score=113.66 Aligned_cols=128 Identities=10% Similarity=0.018 Sum_probs=87.8
Q ss_pred CCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEecccccccccc
Q 012961 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQR 295 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~~d 295 (452)
..+|||||||+|.++..+++.. ..+.+...|+ +.+++.|++. .++.+...|... +++ .||+|+++. ++|+.++
T Consensus 194 ~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~-~~v~~~~~d~~~-~~~--~~D~v~~~~-vlh~~~d 266 (358)
T 1zg3_A 194 LESLVDVGGGTGGVTKLIHEIF-PHLKCTVFDQ-PQVVGNLTGN-ENLNFVGGDMFK-SIP--SADAVLLKW-VLHDWND 266 (358)
T ss_dssp CSEEEEETCTTSHHHHHHHHHC-TTSEEEEEEC-HHHHSSCCCC-SSEEEEECCTTT-CCC--CCSEEEEES-CGGGSCH
T ss_pred CCEEEEECCCcCHHHHHHHHHC-CCCeEEEecc-HHHHhhcccC-CCcEEEeCccCC-CCC--CceEEEEcc-cccCCCH
Confidence 3589999999999999998741 1122223344 2444444432 348888888876 666 499999988 5777777
Q ss_pred HH--HHHHHHHHhcCC---CcEEEEEeCCCCC--CCh---hhH---------------HHHHHHHHHHHhCCCEEEEEEe
Q 012961 296 DG--ILLLELDRLLRP---GGYFVYSSPEAYA--HDP---ENR---------------RIWNAMYDLLKSMCWKIVSKKD 350 (452)
Q Consensus 296 ~~--~~L~ei~RvLkP---GG~lvi~~p~~~~--~~~---~~~---------------~~~~~l~~ll~~~Gf~~v~~~~ 350 (452)
.. .+|+++.++|+| ||+++|.++.... ..+ ... ...+++.++++++||+.++...
T Consensus 267 ~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~~ 346 (358)
T 1zg3_A 267 EQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFSSYKITP 346 (358)
T ss_dssp HHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccCCCCCCCHHHHHHHHHHcCCCeeEEEe
Confidence 66 899999999999 9999997643211 110 000 0225788999999999887654
No 173
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.01 E-value=1.8e-09 Score=102.15 Aligned_cols=119 Identities=13% Similarity=0.110 Sum_probs=81.9
Q ss_pred CCCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHcC--CCeEEEEecCCCCCCCCCCceEEEeccccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERG--IPSTLGVLGTKRLPYPSRSFELAHCSRCRI 290 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg--~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l 290 (452)
+..+|||+|||+|.++..+++. .++++|+++..+..+.... ...+ .++.+...|.....+++++||+|++..
T Consensus 91 ~~~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~-~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~--- 166 (248)
T 2yvl_A 91 KEKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNL-KKFNLGKNVKFFNVDFKDAEVPEGIFHAAFVDV--- 166 (248)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHH-HHTTCCTTEEEECSCTTTSCCCTTCBSEEEECS---
T ss_pred CCCEEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHHH-HHcCCCCcEEEEEcChhhcccCCCcccEEEECC---
Confidence 3458999999999999998863 5666666655544333222 2224 357888888776543567899999642
Q ss_pred cccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEEE
Q 012961 291 DWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 349 (452)
Q Consensus 291 ~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~ 349 (452)
+++..+++++.++|+|||.+++..+.. ....++...+++. |..+...
T Consensus 167 ---~~~~~~l~~~~~~L~~gG~l~~~~~~~--------~~~~~~~~~l~~~-f~~~~~~ 213 (248)
T 2yvl_A 167 ---REPWHYLEKVHKSLMEGAPVGFLLPTA--------NQVIKLLESIENY-FGNLEVV 213 (248)
T ss_dssp ---SCGGGGHHHHHHHBCTTCEEEEEESSH--------HHHHHHHHHSTTT-EEEEEEE
T ss_pred ---cCHHHHHHHHHHHcCCCCEEEEEeCCH--------HHHHHHHHHHHhh-CCcceEE
Confidence 355678999999999999999988642 1234566666666 7655443
No 174
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.00 E-value=2.3e-09 Score=104.20 Aligned_cols=98 Identities=12% Similarity=0.030 Sum_probs=74.3
Q ss_pred CCCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHcC-CCeEEEEecCCCCCCCCCCceEEEecccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERG-IPSTLGVLGTKRLPYPSRSFELAHCSRCR 289 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg-~~~~~~~~d~~~lp~~d~sFDlVv~s~~~ 289 (452)
+..+|||+|||+|.++..++.. .|+++|+++..+..+.. .++..+ .++.+..+|+..++. .++||+|++....
T Consensus 119 ~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~-n~~~n~l~~~~~~~~d~~~~~~-~~~~D~Vi~d~p~ 196 (272)
T 3a27_A 119 ENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCE-NIKLNKLNNVIPILADNRDVEL-KDVADRVIMGYVH 196 (272)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHH-HHHHTTCSSEEEEESCGGGCCC-TTCEEEEEECCCS
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHH-HHHHcCCCCEEEEECChHHcCc-cCCceEEEECCcc
Confidence 3458999999999999999863 57888887777655543 333334 357888999887744 5789999976531
Q ss_pred ccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012961 290 IDWLQRDGILLLELDRLLRPGGYFVYSSPE 319 (452)
Q Consensus 290 l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~ 319 (452)
+...++.++.++|+|||.++++...
T Consensus 197 -----~~~~~l~~~~~~LkpgG~l~~s~~~ 221 (272)
T 3a27_A 197 -----KTHKFLDKTFEFLKDRGVIHYHETV 221 (272)
T ss_dssp -----SGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred -----cHHHHHHHHHHHcCCCCEEEEEEcC
Confidence 4466899999999999999987744
No 175
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.00 E-value=8.3e-10 Score=101.16 Aligned_cols=91 Identities=12% Similarity=0.155 Sum_probs=67.8
Q ss_pred CCEEEEECCCCchHHHHHhhC------CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC---------------
Q 012961 216 IRNVLDVGCGVASFGAYLLSH------DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP--------------- 274 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~------~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp--------------- 274 (452)
..+|||||||+|.++..+++. .|+++|+++.. ...++.+..+|....+
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~ 91 (201)
T 2plw_A 23 NKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PIPNVYFIQGEIGKDNMNNIKNINYIDNMNN 91 (201)
T ss_dssp TEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CCTTCEEEECCTTTTSSCCC-----------
T ss_pred CCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CCCCceEEEccccchhhhhhccccccccccc
Confidence 358999999999999998753 47778777631 1235788888887776
Q ss_pred ----------CCCCCceEEEecccccccc----ccH-------HHHHHHHHHhcCCCcEEEEEeC
Q 012961 275 ----------YPSRSFELAHCSRCRIDWL----QRD-------GILLLELDRLLRPGGYFVYSSP 318 (452)
Q Consensus 275 ----------~~d~sFDlVv~s~~~l~~~----~d~-------~~~L~ei~RvLkPGG~lvi~~p 318 (452)
+++++||+|++.. .+++. .+. ..+++++.++|||||.|++...
T Consensus 92 ~~~~~~~~~~~~~~~fD~v~~~~-~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 155 (201)
T 2plw_A 92 NSVDYKLKEILQDKKIDIILSDA-AVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMY 155 (201)
T ss_dssp CHHHHHHHHHHTTCCEEEEEECC-CCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhhHHHHHhhcCCCcccEEEeCC-CcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEe
Confidence 5667999999876 34442 222 2378999999999999998653
No 176
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.00 E-value=1e-09 Score=110.52 Aligned_cols=100 Identities=15% Similarity=0.179 Sum_probs=73.8
Q ss_pred CCCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcC--CCeEEEEecCCCCCCCCCCceEEEecccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERG--IPSTLGVLGTKRLPYPSRSFELAHCSRCR 289 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg--~~~~~~~~d~~~lp~~d~sFDlVv~s~~~ 289 (452)
+..+|||||||+|.++..+++. .|+++|+++ ++. .+.+.++..+ .++.+..+|..+++++ ++||+|++....
T Consensus 50 ~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~-~a~~~~~~~~l~~~v~~~~~d~~~~~~~-~~~D~Ivs~~~~ 126 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQ-HAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPMG 126 (348)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHH-HHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEEECCCB
T ss_pred CcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHH-HHHHHHHHcCCCCcEEEEEcchhhCCCC-CceeEEEEeCch
Confidence 3458999999999999998864 578888875 443 2334444444 3588999999888776 679999987643
Q ss_pred cccc-ccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 290 IDWL-QRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 290 l~~~-~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
.++. ++....+.++.++|||||.+++..
T Consensus 127 ~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 127 YMLFNERMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp TTBTTTSHHHHHHHGGGGEEEEEEEESCE
T ss_pred hcCChHHHHHHHHHHHhhcCCCeEEEEec
Confidence 3333 334568889999999999999653
No 177
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.99 E-value=1.3e-09 Score=103.01 Aligned_cols=111 Identities=14% Similarity=0.187 Sum_probs=74.9
Q ss_pred HHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhh---CCCccccCChhhhhHHHHHHHHHcC-CCeEEEEe
Q 012961 193 DKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLS---HDIIAMSLAPNDVHENQIQFALERG-IPSTLGVL 268 (452)
Q Consensus 193 ~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~---~~v~~vdis~~dis~~~~~~A~~rg-~~~~~~~~ 268 (452)
......+.+.+.. .+..+|||||||+|.++..+++ ..|+++|+++..+..+..... ..+ .++.+...
T Consensus 77 ~~~~~~~~~~l~~--------~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~v~~~~~ 147 (235)
T 1jg1_A 77 PHMVAIMLEIANL--------KPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLE-RAGVKNVHVILG 147 (235)
T ss_dssp HHHHHHHHHHHTC--------CTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHH-HTTCCSEEEEES
T ss_pred HHHHHHHHHhcCC--------CCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHH-HcCCCCcEEEEC
Confidence 3344455555542 2345799999999999999886 467777776665544432222 233 35778888
Q ss_pred cCCCCCCCCC-CceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012961 269 GTKRLPYPSR-SFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEA 320 (452)
Q Consensus 269 d~~~lp~~d~-sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~ 320 (452)
|. ..++++. .||+|++.. .+++.. .++.++|+|||++++..+..
T Consensus 148 d~-~~~~~~~~~fD~Ii~~~-~~~~~~------~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 148 DG-SKGFPPKAPYDVIIVTA-GAPKIP------EPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp CG-GGCCGGGCCEEEEEECS-BBSSCC------HHHHHTEEEEEEEEEEECSS
T ss_pred Cc-ccCCCCCCCccEEEECC-cHHHHH------HHHHHhcCCCcEEEEEEecC
Confidence 86 4455544 499999877 455433 47899999999999988654
No 178
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.99 E-value=1.3e-09 Score=107.44 Aligned_cols=106 Identities=16% Similarity=0.161 Sum_probs=71.3
Q ss_pred CCCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHH-----cCCCeEEEEecCCCC-CCCCCCceEEE
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALE-----RGIPSTLGVLGTKRL-PYPSRSFELAH 284 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~-----rg~~~~~~~~d~~~l-p~~d~sFDlVv 284 (452)
++++|||||||+|.++..+++. .|+++|+++..+..+...+... ...++.+.++|.... ...+++||+|+
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi 162 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEE
Confidence 3568999999999999999874 4667777776665444332221 134688888887554 44567899999
Q ss_pred eccccccccccH----HHHHHHHHHhcCCCcEEEEEeCCCC
Q 012961 285 CSRCRIDWLQRD----GILLLELDRLLRPGGYFVYSSPEAY 321 (452)
Q Consensus 285 ~s~~~l~~~~d~----~~~L~ei~RvLkPGG~lvi~~p~~~ 321 (452)
+.. ..++.+.. ..+++++.++|+|||++++.....+
T Consensus 163 ~D~-~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~ 202 (294)
T 3adn_A 163 SDC-TDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCF 202 (294)
T ss_dssp ECC-----------CCHHHHHHHHHTEEEEEEEEEEEEECS
T ss_pred ECC-CCccCcchhccHHHHHHHHHHhcCCCCEEEEecCCcc
Confidence 754 23332221 5699999999999999999764433
No 179
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.98 E-value=3.1e-10 Score=108.10 Aligned_cols=116 Identities=14% Similarity=0.099 Sum_probs=80.3
Q ss_pred CEEEEECCCCchHHHHHhh--------CCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCC---CCCC-CCceEEE
Q 012961 217 RNVLDVGCGVASFGAYLLS--------HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRL---PYPS-RSFELAH 284 (452)
Q Consensus 217 ~~VLDIGCG~G~~~~~La~--------~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~l---p~~d-~sFDlVv 284 (452)
.+|||||||+|..+..|++ ..|+++|+++.++..+. ....++.+.++|...+ +..+ .+||+|+
T Consensus 83 ~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~-----~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~ 157 (236)
T 2bm8_A 83 RTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA-----SDMENITLHQGDCSDLTTFEHLREMAHPLIF 157 (236)
T ss_dssp SEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG-----GGCTTEEEEECCSSCSGGGGGGSSSCSSEEE
T ss_pred CEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh-----ccCCceEEEECcchhHHHHHhhccCCCCEEE
Confidence 4899999999999998865 35778888777654332 3345789999998774 5433 4799999
Q ss_pred eccccccccccHHHHHHHHHH-hcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhC--CCEE
Q 012961 285 CSRCRIDWLQRDGILLLELDR-LLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSM--CWKI 345 (452)
Q Consensus 285 ~s~~~l~~~~d~~~~L~ei~R-vLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~--Gf~~ 345 (452)
+... | .+...++.++.| +|||||++++.+...+. ....-..+.+++++. +|.+
T Consensus 158 ~d~~--~--~~~~~~l~~~~r~~LkpGG~lv~~d~~~~~----~~~~~~~~~~~l~~~~~~f~~ 213 (236)
T 2bm8_A 158 IDNA--H--ANTFNIMKWAVDHLLEEGDYFIIEDMIPYW----YRYAPQLFSEYLGAFRDVLSM 213 (236)
T ss_dssp EESS--C--SSHHHHHHHHHHHTCCTTCEEEECSCHHHH----HHHCHHHHHHHHHTTTTTEEE
T ss_pred ECCc--h--HhHHHHHHHHHHhhCCCCCEEEEEeCcccc----cccCHHHHHHHHHhCcccEEE
Confidence 7552 2 356779999998 99999999996531100 000113567777776 5654
No 180
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=98.97 E-value=6.9e-10 Score=103.95 Aligned_cols=100 Identities=17% Similarity=0.191 Sum_probs=69.1
Q ss_pred CCEEEEECCCCchHHHHHhhC-----CCccccCChhhhhHHHHHHHHHcCC--CeEEEEecCCC-CCC-C----CCCceE
Q 012961 216 IRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKR-LPY-P----SRSFEL 282 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~-----~v~~vdis~~dis~~~~~~A~~rg~--~~~~~~~d~~~-lp~-~----d~sFDl 282 (452)
+.+|||||||+|.++..+++. .|+++|+++.++..+... +...+. ++.+..+|+.+ ++. . .++||+
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~ 137 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQM-LNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDM 137 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHH-HHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHH-HHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEE
Confidence 358999999999999999863 466777766655444422 222343 48888888643 332 2 268999
Q ss_pred EEeccccccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012961 283 AHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSP 318 (452)
Q Consensus 283 Vv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p 318 (452)
|++.. ..++..+...++.++ ++|||||++++.+.
T Consensus 138 V~~d~-~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~ 171 (221)
T 3u81_A 138 VFLDH-WKDRYLPDTLLLEKC-GLLRKGTVLLADNV 171 (221)
T ss_dssp EEECS-CGGGHHHHHHHHHHT-TCCCTTCEEEESCC
T ss_pred EEEcC-CcccchHHHHHHHhc-cccCCCeEEEEeCC
Confidence 99876 344444445677777 99999999998654
No 181
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=98.97 E-value=9.9e-10 Score=103.65 Aligned_cols=97 Identities=14% Similarity=0.175 Sum_probs=69.9
Q ss_pred CCEEEEECCCCchHHHHHhhC-----CCccccCChhhhhHHHHHHHHHcCC---CeEEEEecCCCC-C-CCCCCceEEEe
Q 012961 216 IRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGI---PSTLGVLGTKRL-P-YPSRSFELAHC 285 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~-----~v~~vdis~~dis~~~~~~A~~rg~---~~~~~~~d~~~l-p-~~d~sFDlVv~ 285 (452)
..+|||||||+|..+..|+.. .|+++|+++..+..+.. ...+.+. ++.+..+|+.++ + +++++||+|++
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~-~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~ 135 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKA-LFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFG 135 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHH-HHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEE
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH-HHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEE
Confidence 348999999999999998862 57777777766655442 2333343 478888886543 2 33688999997
Q ss_pred ccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 286 SRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 286 s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
... ..+...+++++.++|||||++++..
T Consensus 136 d~~----~~~~~~~l~~~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 136 QVS----PMDLKALVDAAWPLLRRGGALVLAD 163 (221)
T ss_dssp CCC----TTTHHHHHHHHHHHEEEEEEEEETT
T ss_pred cCc----HHHHHHHHHHHHHHcCCCcEEEEeC
Confidence 542 3445668999999999999999854
No 182
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.97 E-value=3.9e-09 Score=100.34 Aligned_cols=120 Identities=14% Similarity=0.053 Sum_probs=88.3
Q ss_pred CCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHcCC--CeEEEEecCCCCCCCCCCceEEEecccc
Q 012961 216 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCR 289 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg~--~~~~~~~d~~~lp~~d~sFDlVv~s~~~ 289 (452)
+.+|||||||+|.++..|+.. .|+++|+++..+..+..+. +..+. ++.+..+|......+++.||+|+.....
T Consensus 22 g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~-~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaGmG 100 (230)
T 3lec_A 22 GARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNV-SEHGLTSKIDVRLANGLSAFEEADNIDTITICGMG 100 (230)
T ss_dssp TEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHH-HHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEEC
T ss_pred CCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-HHcCCCCcEEEEECchhhccccccccCEEEEeCCc
Confidence 358999999999999999874 4778888777765555333 33443 4888999977665554579998754411
Q ss_pred ccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEEE
Q 012961 290 IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 349 (452)
Q Consensus 290 l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~ 349 (452)
- .-...++.+..+.|+++|+|+++.... .+.+.+.+.+.||.++...
T Consensus 101 g---~lI~~IL~~~~~~l~~~~~lIlqp~~~----------~~~lr~~L~~~Gf~i~~E~ 147 (230)
T 3lec_A 101 G---RLIADILNNDIDKLQHVKTLVLQPNNR----------EDDLRKWLAANDFEIVAED 147 (230)
T ss_dssp H---HHHHHHHHHTGGGGTTCCEEEEEESSC----------HHHHHHHHHHTTEEEEEEE
T ss_pred h---HHHHHHHHHHHHHhCcCCEEEEECCCC----------hHHHHHHHHHCCCEEEEEE
Confidence 1 223568889999999999999976321 4678889999999998876
No 183
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.95 E-value=1.3e-09 Score=109.34 Aligned_cols=106 Identities=16% Similarity=0.141 Sum_probs=71.8
Q ss_pred CCCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHH----cCCCeEEEEecCCCC--CCCCCCceEEE
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALE----RGIPSTLGVLGTKRL--PYPSRSFELAH 284 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~----rg~~~~~~~~d~~~l--p~~d~sFDlVv 284 (452)
.+.+|||||||+|.++..|++. .|+++|+++..+..+...+... ...++.+..+|+..+ .+++++||+|+
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi 199 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVI 199 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEE
T ss_pred CCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEEE
Confidence 3468999999999999999864 4566666555544433222211 124688899886553 23457899999
Q ss_pred ecccccccc--cc--HHHHHHHHHHhcCCCcEEEEEeCCCC
Q 012961 285 CSRCRIDWL--QR--DGILLLELDRLLRPGGYFVYSSPEAY 321 (452)
Q Consensus 285 ~s~~~l~~~--~d--~~~~L~ei~RvLkPGG~lvi~~p~~~ 321 (452)
+.. ..++. .. ...+++++.++|+|||++++.....+
T Consensus 200 ~d~-~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~ 239 (334)
T 1xj5_A 200 VDS-SDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLW 239 (334)
T ss_dssp ECC-CCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCCTT
T ss_pred ECC-CCccCcchhhhHHHHHHHHHHhcCCCcEEEEecCCcc
Confidence 754 22221 11 36799999999999999999765544
No 184
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.95 E-value=4.3e-10 Score=107.40 Aligned_cols=135 Identities=10% Similarity=0.096 Sum_probs=77.1
Q ss_pred CCCEEEEECCCCchHHHHHhh----CCCccccCChhhhhHHHHHHHHHcCC--CeEEEEecCCCC---CCC---CCCceE
Q 012961 215 NIRNVLDVGCGVASFGAYLLS----HDIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRL---PYP---SRSFEL 282 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~----~~v~~vdis~~dis~~~~~~A~~rg~--~~~~~~~d~~~l---p~~---d~sFDl 282 (452)
+..+|||+|||+|.++..++. ..|+++|+++.++..+..+ +...+. ++.+..+|+.+. +++ +++||+
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKN-VEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDF 143 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHH-HHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHH-HHHcCCCccEEEEEcchhhhhhhhhhcccCCcccE
Confidence 345899999999999888875 3677888777776555433 333343 378888887652 444 268999
Q ss_pred EEecccccccc--------------ccHHHHHHHHHHhcCCCcEEEEEeC-----------CCCCCChh-hHHHHHHHHH
Q 012961 283 AHCSRCRIDWL--------------QRDGILLLELDRLLRPGGYFVYSSP-----------EAYAHDPE-NRRIWNAMYD 336 (452)
Q Consensus 283 Vv~s~~~l~~~--------------~d~~~~L~ei~RvLkPGG~lvi~~p-----------~~~~~~~~-~~~~~~~l~~ 336 (452)
|+++...++.. .....++.++.|+|||||.+.+... ..+..... .....+++.+
T Consensus 144 i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~ 223 (254)
T 2h00_A 144 CMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLGKKCSLAPLKE 223 (254)
T ss_dssp EEECCCCC-------------------------CTTTTHHHHTHHHHHHHHHHHHHHHGGGBSCEEEEESSTTSHHHHHH
T ss_pred EEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHHHHHHHhcccceEEEEECCCChhHHHHHHH
Confidence 99874222111 0112356677777777776654321 00000000 0011246778
Q ss_pred HHHhCCCEEEEEEe
Q 012961 337 LLKSMCWKIVSKKD 350 (452)
Q Consensus 337 ll~~~Gf~~v~~~~ 350 (452)
+++++||+.+....
T Consensus 224 ~l~~~Gf~~v~~~~ 237 (254)
T 2h00_A 224 ELRIQGVPKVTYTE 237 (254)
T ss_dssp HHHHTTCSEEEEEE
T ss_pred HHHHcCCCceEEEE
Confidence 88889997766543
No 185
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=98.95 E-value=7.9e-10 Score=104.61 Aligned_cols=98 Identities=7% Similarity=0.083 Sum_probs=70.9
Q ss_pred CCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHcCC--CeEEEEecCCCC-C-CCCCCceEEEecc
Q 012961 216 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRL-P-YPSRSFELAHCSR 287 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg~--~~~~~~~d~~~l-p-~~d~sFDlVv~s~ 287 (452)
..+|||||||+|.++..|+.. .|+++|+++..+..+.. .+.+.+. ++.+..+|+... + ..+++||+|++..
T Consensus 72 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~-~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~ 150 (232)
T 3ntv_A 72 VKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQ-NLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDA 150 (232)
T ss_dssp CCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHH-HHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEET
T ss_pred CCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHH-HHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcC
Confidence 358999999999999999872 46667666655544432 2233343 688999997654 3 3367899999654
Q ss_pred ccccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012961 288 CRIDWLQRDGILLLELDRLLRPGGYFVYSSP 318 (452)
Q Consensus 288 ~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p 318 (452)
...+...+++++.++|||||++++...
T Consensus 151 ----~~~~~~~~l~~~~~~LkpgG~lv~d~~ 177 (232)
T 3ntv_A 151 ----AKAQSKKFFEIYTPLLKHQGLVITDNV 177 (232)
T ss_dssp ----TSSSHHHHHHHHGGGEEEEEEEEEECT
T ss_pred ----cHHHHHHHHHHHHHhcCCCeEEEEeeC
Confidence 234556799999999999999988543
No 186
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.95 E-value=3.6e-09 Score=101.42 Aligned_cols=120 Identities=12% Similarity=0.021 Sum_probs=86.9
Q ss_pred CCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHcCC--CeEEEEecCCCCCCCCCCceEEEecccc
Q 012961 216 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCR 289 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg~--~~~~~~~d~~~lp~~d~sFDlVv~s~~~ 289 (452)
..+|||||||+|.++..|+.. .|+++|+++..+..+.. .++..+. .+.+..+|......++..||+|+.....
T Consensus 22 g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~-N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~IviagmG 100 (244)
T 3gnl_A 22 NERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQK-QVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAGMG 100 (244)
T ss_dssp SEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHH-HHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEEC
T ss_pred CCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHH-HHHHcCCCceEEEEecchhhccCccccccEEEEeCCc
Confidence 358999999999999999874 47788887776655553 3333454 4788888876655444469998865421
Q ss_pred ccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEEE
Q 012961 290 IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 349 (452)
Q Consensus 290 l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~ 349 (452)
- .-...++.+..+.|+++|+|+++.... .+.+.+.+.+.||.++...
T Consensus 101 g---~lI~~IL~~~~~~L~~~~~lIlq~~~~----------~~~lr~~L~~~Gf~i~~E~ 147 (244)
T 3gnl_A 101 G---TLIRTILEEGAAKLAGVTKLILQPNIA----------AWQLREWSEQNNWLITSEA 147 (244)
T ss_dssp H---HHHHHHHHHTGGGGTTCCEEEEEESSC----------HHHHHHHHHHHTEEEEEEE
T ss_pred h---HHHHHHHHHHHHHhCCCCEEEEEcCCC----------hHHHHHHHHHCCCEEEEEE
Confidence 1 123458899999999999999976321 4578888999999987665
No 187
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.94 E-value=7.6e-09 Score=105.16 Aligned_cols=122 Identities=17% Similarity=0.140 Sum_probs=86.0
Q ss_pred CCCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHcCC--CeEEEEecCCCCCCCCCCceEEEeccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRC 288 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg~--~~~~~~~d~~~lp~~d~sFDlVv~s~~ 288 (452)
+..+|||+|||+|.++..++.. .|+++|+++.++..+. +.+...+. ++.+.++|+..+++++++||+|+++..
T Consensus 217 ~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~-~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~npP 295 (373)
T 3tm4_A 217 DGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAE-MNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNLP 295 (373)
T ss_dssp CSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHH-HHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEECC
T ss_pred CCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHH-HHHHHcCCCCceEEEECChhhCCcccCCcCEEEECCC
Confidence 3457999999999999999863 5777777777665554 33334454 689999999999988889999998532
Q ss_pred cc------ccccc-HHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEEEe
Q 012961 289 RI------DWLQR-DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKD 350 (452)
Q Consensus 289 ~l------~~~~d-~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~ 350 (452)
.- +...+ ...+++++.++| ||.+++..+. .+.+++.+++.||+......
T Consensus 296 yg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~~-----------~~~~~~~~~~~G~~~~~~~~ 351 (373)
T 3tm4_A 296 YGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITTE-----------KKAIEEAIAENGFEIIHHRV 351 (373)
T ss_dssp CC------CCHHHHHHHHHHHHHHHE--EEEEEEEESC-----------HHHHHHHHHHTTEEEEEEEE
T ss_pred CCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEECC-----------HHHHHHHHHHcCCEEEEEEE
Confidence 11 11112 256889999999 5555554432 24577788999999876543
No 188
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.94 E-value=2.3e-09 Score=100.29 Aligned_cols=98 Identities=16% Similarity=0.158 Sum_probs=70.7
Q ss_pred CCCEEEEECCCCchHHHHHhhC-----CCccccCChhhhhHHHHHHHHHc-----CCCeEEEEecCCCCCCCCCCceEEE
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALER-----GIPSTLGVLGTKRLPYPSRSFELAH 284 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~-----~v~~vdis~~dis~~~~~~A~~r-----g~~~~~~~~d~~~lp~~d~sFDlVv 284 (452)
+..+|||||||+|.++..+++. .|+++|+++..+..+........ ..++.+...|....+..+++||+|+
T Consensus 77 ~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~ 156 (226)
T 1i1n_A 77 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDAIH 156 (226)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCEEE
Confidence 3458999999999999988752 57777777666554442222211 2368888888876655567899999
Q ss_pred eccccccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012961 285 CSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPE 319 (452)
Q Consensus 285 ~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~ 319 (452)
+... ++. ++.++.++|||||+++++...
T Consensus 157 ~~~~-~~~------~~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 157 VGAA-APV------VPQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp ECSB-BSS------CCHHHHHTEEEEEEEEEEESC
T ss_pred ECCc-hHH------HHHHHHHhcCCCcEEEEEEec
Confidence 8763 332 357899999999999998754
No 189
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.92 E-value=1.1e-09 Score=104.59 Aligned_cols=104 Identities=14% Similarity=0.065 Sum_probs=67.5
Q ss_pred CCCEEEEECCCCchHHHHHhhC------CCccccCChhhhhHHHHHHHHHc--CC--C----------------------
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH------DIIAMSLAPNDVHENQIQFALER--GI--P---------------------- 262 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~------~v~~vdis~~dis~~~~~~A~~r--g~--~---------------------- 262 (452)
...+|||+|||+|.++..++.. .|+++|+++.++..+........ +. .
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 3458999999999999988753 46667666655544432211110 11 1
Q ss_pred ---eE-------------EEEecCCCCCC-----CCCCceEEEecccccccc--------ccHHHHHHHHHHhcCCCcEE
Q 012961 263 ---ST-------------LGVLGTKRLPY-----PSRSFELAHCSRCRIDWL--------QRDGILLLELDRLLRPGGYF 313 (452)
Q Consensus 263 ---~~-------------~~~~d~~~lp~-----~d~sFDlVv~s~~~l~~~--------~d~~~~L~ei~RvLkPGG~l 313 (452)
+. +...|+..... ..++||+|+|+...+... .....+++++.++|+|||++
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 210 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVI 210 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEE
T ss_pred hhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEE
Confidence 34 88888765321 345899999875322211 22357999999999999999
Q ss_pred EEEeC
Q 012961 314 VYSSP 318 (452)
Q Consensus 314 vi~~p 318 (452)
+++..
T Consensus 211 ~~~~~ 215 (250)
T 1o9g_A 211 AVTDR 215 (250)
T ss_dssp EEEES
T ss_pred EEeCc
Confidence 99543
No 190
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.92 E-value=8.9e-09 Score=100.69 Aligned_cols=158 Identities=13% Similarity=0.107 Sum_probs=106.7
Q ss_pred eecCceeecCCCCCCCcccHHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhh---CCCccccCChhhhh
Q 012961 173 VVNGEKINFPGGGTHFHDGADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLS---HDIIAMSLAPNDVH 249 (452)
Q Consensus 173 ~~~g~~~~F~g~g~~f~~~~~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~---~~v~~vdis~~dis 249 (452)
.+.|-.+.|.-....|..+...-...+.+++. ++.+|||+|||+|.++..++. ..|+++|+++..+.
T Consensus 93 ~E~G~~~~~D~~k~~f~~~~~~er~ri~~~~~----------~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~ 162 (278)
T 3k6r_A 93 VENGIKYKLDVAKIMFSPANVKERVRMAKVAK----------PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFK 162 (278)
T ss_dssp EETTEEEEEETTTSCCCGGGHHHHHHHHHHCC----------TTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHH
T ss_pred EECCEEEEEeccceEEcCCcHHHHHHHHHhcC----------CCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHH
Confidence 45666677766667777777666666766654 345899999999999998875 35788888877665
Q ss_pred HHHHHHHHHcCC--CeEEEEecCCCCCCCCCCceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhh
Q 012961 250 ENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPEN 327 (452)
Q Consensus 250 ~~~~~~A~~rg~--~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~ 327 (452)
... +.++..+. .+.+..+|+.+++. .+.||.|++.. ......++..+.++||+||.+.+.....-. ...
T Consensus 163 ~~~-~N~~~N~v~~~v~~~~~D~~~~~~-~~~~D~Vi~~~-----p~~~~~~l~~a~~~lk~gG~ih~~~~~~e~--~~~ 233 (278)
T 3k6r_A 163 FLV-ENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGY-----VVRTHEFIPKALSIAKDGAIIHYHNTVPEK--LMP 233 (278)
T ss_dssp HHH-HHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECC-----CSSGGGGHHHHHHHEEEEEEEEEEEEEEGG--GTT
T ss_pred HHH-HHHHHcCCCCcEEEEeCcHHHhcc-ccCCCEEEECC-----CCcHHHHHHHHHHHcCCCCEEEEEeeeccc--ccc
Confidence 444 33444443 37788889887764 47899998653 122345788899999999998764321100 001
Q ss_pred HHHHHHHHHHHHhCCCEEEEEE
Q 012961 328 RRIWNAMYDLLKSMCWKIVSKK 349 (452)
Q Consensus 328 ~~~~~~l~~ll~~~Gf~~v~~~ 349 (452)
....+.++++++..|+++....
T Consensus 234 ~~~~e~i~~~~~~~g~~v~~~~ 255 (278)
T 3k6r_A 234 REPFETFKRITKEYGYDVEKLN 255 (278)
T ss_dssp TTTHHHHHHHHHHTTCEEEEEE
T ss_pred hhHHHHHHHHHHHcCCcEEEEE
Confidence 1224677888999999875443
No 191
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.92 E-value=3.6e-09 Score=99.32 Aligned_cols=96 Identities=17% Similarity=0.210 Sum_probs=69.7
Q ss_pred CCEEEEECCCCchHHHHHhhC----------CCccccCChhhhhHHHHHHHHHc-----CCCeEEEEecCCCCCCCC-CC
Q 012961 216 IRNVLDVGCGVASFGAYLLSH----------DIIAMSLAPNDVHENQIQFALER-----GIPSTLGVLGTKRLPYPS-RS 279 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~----------~v~~vdis~~dis~~~~~~A~~r-----g~~~~~~~~d~~~lp~~d-~s 279 (452)
..+|||||||+|.++..|++. .|+++|+++..+..+........ ..++.+...|... ++++ ++
T Consensus 85 ~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~ 163 (227)
T 1r18_A 85 GARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK-GYPPNAP 163 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG-CCGGGCS
T ss_pred CCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc-CCCcCCC
Confidence 458999999999999988762 57777777766655443332221 2467888888766 4544 78
Q ss_pred ceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012961 280 FELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPE 319 (452)
Q Consensus 280 FDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~ 319 (452)
||+|++... +++. +.++.++|||||++++....
T Consensus 164 fD~I~~~~~-~~~~------~~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 164 YNAIHVGAA-APDT------PTELINQLASGGRLIVPVGP 196 (227)
T ss_dssp EEEEEECSC-BSSC------CHHHHHTEEEEEEEEEEESC
T ss_pred ccEEEECCc-hHHH------HHHHHHHhcCCCEEEEEEec
Confidence 999998774 5443 47899999999999998754
No 192
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.90 E-value=8.7e-10 Score=103.23 Aligned_cols=97 Identities=14% Similarity=0.077 Sum_probs=70.2
Q ss_pred CCEEEEECCCCchHHHHHhhC---------CCccccCChhhhhHHHHHHHHHc-----CCCeEEEEecCCCCC----CCC
Q 012961 216 IRNVLDVGCGVASFGAYLLSH---------DIIAMSLAPNDVHENQIQFALER-----GIPSTLGVLGTKRLP----YPS 277 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~---------~v~~vdis~~dis~~~~~~A~~r-----g~~~~~~~~d~~~lp----~~d 277 (452)
..+|||||||+|.++..+++. .|+++|+++..+..+........ ..++.+...|..... ...
T Consensus 81 ~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 160 (227)
T 2pbf_A 81 GSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKEL 160 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCccC
Confidence 458999999999999988862 46677766655544443222221 246888888887754 456
Q ss_pred CCceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012961 278 RSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPE 319 (452)
Q Consensus 278 ~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~ 319 (452)
++||+|++.. .+++ ++.++.++|+|||++++..+.
T Consensus 161 ~~fD~I~~~~-~~~~------~~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 161 GLFDAIHVGA-SASE------LPEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp CCEEEEEECS-BBSS------CCHHHHHHEEEEEEEEEEEEE
T ss_pred CCcCEEEECC-chHH------HHHHHHHhcCCCcEEEEEEcc
Confidence 7899999876 3443 358899999999999998754
No 193
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.90 E-value=1.3e-09 Score=100.94 Aligned_cols=95 Identities=11% Similarity=0.149 Sum_probs=67.8
Q ss_pred CEEEEECCCCchHHHHHhhC-----CCccccCChhhhhHHHHHHHHHcCC--CeEEEEecCCCC-CCCCCCceEEEeccc
Q 012961 217 RNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRL-PYPSRSFELAHCSRC 288 (452)
Q Consensus 217 ~~VLDIGCG~G~~~~~La~~-----~v~~vdis~~dis~~~~~~A~~rg~--~~~~~~~d~~~l-p~~d~sFDlVv~s~~ 288 (452)
.+|||||||+|..+..++.. .|+++|+++..+..+..... ..+. ++.+..+|..+. +..++ ||+|++..
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~- 134 (210)
T 3c3p_A 58 QLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLH-DNGLIDRVELQVGDPLGIAAGQRD-IDILFMDC- 134 (210)
T ss_dssp SEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHH-HHSGGGGEEEEESCHHHHHTTCCS-EEEEEEET-
T ss_pred CEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH-HCCCCceEEEEEecHHHHhccCCC-CCEEEEcC-
Confidence 48999999999999999864 46666666655544432222 2232 478888887543 54446 99999753
Q ss_pred cccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 289 RIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 289 ~l~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
...+...+++++.++|||||++++..
T Consensus 135 ---~~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 135 ---DVFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp ---TTSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred ---ChhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 23455779999999999999999865
No 194
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.90 E-value=7.7e-09 Score=94.92 Aligned_cols=116 Identities=10% Similarity=0.062 Sum_probs=76.4
Q ss_pred CCCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEeccccccccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ 294 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~~ 294 (452)
+..+|||+|||+|.++..++... ...+.+.|+++.+++.|+++..++.+..+|+..++ ++||+|+++. .+++..
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~~~---~~~D~v~~~~-p~~~~~ 124 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLLG--AESVTAFDIDPDAIETAKRNCGGVNFMVADVSEIS---GKYDTWIMNP-PFGSVV 124 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHTT--BSEEEEEESCHHHHHHHHHHCTTSEEEECCGGGCC---CCEEEEEECC-CC----
T ss_pred CCCEEEEEeCCccHHHHHHHHcC--CCEEEEEECCHHHHHHHHHhcCCCEEEECcHHHCC---CCeeEEEECC-Cchhcc
Confidence 34589999999999999998751 11234445556666677665447889999988875 6899999876 455544
Q ss_pred c--HHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEEE
Q 012961 295 R--DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 349 (452)
Q Consensus 295 d--~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~ 349 (452)
+ ...+++++.++| |+.+++..+. .+..+.+++++.| ++....
T Consensus 125 ~~~~~~~l~~~~~~~--g~~~~~~~~~----------~~~~~~~~~~~~g-~~~~~~ 168 (200)
T 1ne2_A 125 KHSDRAFIDKAFETS--MWIYSIGNAK----------ARDFLRREFSARG-DVFREE 168 (200)
T ss_dssp ---CHHHHHHHHHHE--EEEEEEEEGG----------GHHHHHHHHHHHE-EEEEEE
T ss_pred CchhHHHHHHHHHhc--CcEEEEEcCc----------hHHHHHHHHHHCC-CEEEEE
Confidence 3 246899999999 5544443221 1455777788888 554433
No 195
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.90 E-value=8.6e-09 Score=97.72 Aligned_cols=118 Identities=13% Similarity=0.058 Sum_probs=85.3
Q ss_pred CEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHcCC--CeEEEEecC-CCCCCCCCCceEEEecccc
Q 012961 217 RNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGT-KRLPYPSRSFELAHCSRCR 289 (452)
Q Consensus 217 ~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg~--~~~~~~~d~-~~lp~~d~sFDlVv~s~~~ 289 (452)
.+|||||||+|.++..++.. .|+++|+++..+..+. +.++..+. ++.+..+|. ..++.. ..||+|+....
T Consensus 17 ~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~-~N~~~~gl~~~i~~~~~d~l~~l~~~-~~~D~IviaG~- 93 (225)
T 3kr9_A 17 AILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAV-KNVEAHGLKEKIQVRLANGLAAFEET-DQVSVITIAGM- 93 (225)
T ss_dssp EEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHH-HHHHHTTCTTTEEEEECSGGGGCCGG-GCCCEEEEEEE-
T ss_pred CEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHH-HHHHHcCCCceEEEEECchhhhcccC-cCCCEEEEcCC-
Confidence 48999999999999999874 4778888777665554 33344454 478888886 344421 26999886542
Q ss_pred ccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEEE
Q 012961 290 IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 349 (452)
Q Consensus 290 l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~ 349 (452)
. -.-...++.+....|+++|+|+++... ..+.+.+.+.+.||.++...
T Consensus 94 -G-g~~i~~Il~~~~~~L~~~~~lVlq~~~----------~~~~vr~~L~~~Gf~i~~e~ 141 (225)
T 3kr9_A 94 -G-GRLIARILEEGLGKLANVERLILQPNN----------REDDLRIWLQDHGFQIVAES 141 (225)
T ss_dssp -C-HHHHHHHHHHTGGGCTTCCEEEEEESS----------CHHHHHHHHHHTTEEEEEEE
T ss_pred -C-hHHHHHHHHHHHHHhCCCCEEEEECCC----------CHHHHHHHHHHCCCEEEEEE
Confidence 1 112356899999999999999996542 13578888999999998875
No 196
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.90 E-value=2.2e-09 Score=104.67 Aligned_cols=104 Identities=14% Similarity=0.129 Sum_probs=66.9
Q ss_pred CCCEEEEECCCC--chHHHHHhh-----CCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC----CC--CCCce
Q 012961 215 NIRNVLDVGCGV--ASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP----YP--SRSFE 281 (452)
Q Consensus 215 ~~~~VLDIGCG~--G~~~~~La~-----~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp----~~--d~sFD 281 (452)
..++|||||||+ +..+..+++ ..|+++|.++.++..+..........++.++.+|+.+++ .+ .++||
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D 157 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLD 157 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCC
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccC
Confidence 456899999997 333343332 456777666665543332111100124788999987752 11 24455
Q ss_pred -----EEEecccccccccc---HHHHHHHHHHhcCCCcEEEEEeCC
Q 012961 282 -----LAHCSRCRIDWLQR---DGILLLELDRLLRPGGYFVYSSPE 319 (452)
Q Consensus 282 -----lVv~s~~~l~~~~d---~~~~L~ei~RvLkPGG~lvi~~p~ 319 (452)
.|+++ .++||+++ +..+++++.++|+|||+|+++...
T Consensus 158 ~~~p~av~~~-avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~ 202 (277)
T 3giw_A 158 LTRPVALTVI-AIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGT 202 (277)
T ss_dssp TTSCCEEEEE-SCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEEC
T ss_pred cCCcchHHhh-hhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEecc
Confidence 45544 48999987 467999999999999999998643
No 197
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.89 E-value=1.9e-08 Score=102.21 Aligned_cols=129 Identities=11% Similarity=0.036 Sum_probs=88.5
Q ss_pred CCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHcCC-CeEEEEecCCC-CCC-CCCCceEEEeccc
Q 012961 216 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGI-PSTLGVLGTKR-LPY-PSRSFELAHCSRC 288 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg~-~~~~~~~d~~~-lp~-~d~sFDlVv~s~~ 288 (452)
+.+||||| |+|.++..++.. .|+++|+++.++..+. +.+.+.+. ++.+..+|+.. +|. .+++||+|+++.
T Consensus 173 ~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~-~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~- 249 (373)
T 2qm3_A 173 NKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIE-KAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDP- 249 (373)
T ss_dssp TCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHH-HHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECC-
T ss_pred CCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHH-HHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECC-
Confidence 46899999 999999988752 5777877776665544 33333354 68899999887 664 356899999875
Q ss_pred cccccccHHHHHHHHHHhcCCCcE-EEEEeCCCCCCChhhHHHHHHHHHHHH-hCCCEEEEEEece
Q 012961 289 RIDWLQRDGILLLELDRLLRPGGY-FVYSSPEAYAHDPENRRIWNAMYDLLK-SMCWKIVSKKDQT 352 (452)
Q Consensus 289 ~l~~~~d~~~~L~ei~RvLkPGG~-lvi~~p~~~~~~~~~~~~~~~l~~ll~-~~Gf~~v~~~~~~ 352 (452)
.++.. ....++.++.++|||||. ++++... .......|..+.++++ +.||.+.......
T Consensus 250 p~~~~-~~~~~l~~~~~~LkpgG~~~~~~~~~----~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~ 310 (373)
T 2qm3_A 250 PETLE-AIRAFVGRGIATLKGPRCAGYFGITR----RESSLDKWREIQKLLLNEFNVVITDIIRNF 310 (373)
T ss_dssp CSSHH-HHHHHHHHHHHTBCSTTCEEEEEECT----TTCCHHHHHHHHHHHHHTSCCEEEEEEEEE
T ss_pred CCchH-HHHHHHHHHHHHcccCCeEEEEEEec----CcCCHHHHHHHHHHHHHhcCcchhhhhhhh
Confidence 23322 247799999999999994 3554422 0112234567778887 8999876654433
No 198
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.89 E-value=2.1e-09 Score=100.29 Aligned_cols=99 Identities=11% Similarity=0.087 Sum_probs=68.7
Q ss_pred CCEEEEECCCCchHHHHHhhC-----CCccccCChhhhhHHHHHHHHHcCC--CeEEEEecCCCC-C-CC---CCCceEE
Q 012961 216 IRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRL-P-YP---SRSFELA 283 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~-----~v~~vdis~~dis~~~~~~A~~rg~--~~~~~~~d~~~l-p-~~---d~sFDlV 283 (452)
+.+|||||||+|.++..+++. .++++|+++..+..+... +...+. ++.+..+|+... + ++ .++||+|
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v 137 (223)
T 3duw_A 59 ARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSN-IERANLNDRVEVRTGLALDSLQQIENEKYEPFDFI 137 (223)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHH-HHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEE
T ss_pred CCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHH-HHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEE
Confidence 358999999999999999874 456666666555444322 222343 478888886443 1 11 1579999
Q ss_pred EeccccccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012961 284 HCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPE 319 (452)
Q Consensus 284 v~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~ 319 (452)
++... ......++.++.++|+|||++++....
T Consensus 138 ~~d~~----~~~~~~~l~~~~~~L~pgG~lv~~~~~ 169 (223)
T 3duw_A 138 FIDAD----KQNNPAYFEWALKLSRPGTVIIGDNVV 169 (223)
T ss_dssp EECSC----GGGHHHHHHHHHHTCCTTCEEEEESCS
T ss_pred EEcCC----cHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 97642 334567999999999999999887643
No 199
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.89 E-value=4.3e-10 Score=120.62 Aligned_cols=101 Identities=19% Similarity=0.175 Sum_probs=74.6
Q ss_pred CCCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHcC-CCeEEEEecCCCC--CCCCCCceEEEecccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERG-IPSTLGVLGTKRL--PYPSRSFELAHCSRCR 289 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg-~~~~~~~~d~~~l--p~~d~sFDlVv~s~~~ 289 (452)
++.+|||||||.|.++..|++. .|+|+|+++..+..+. ..|.+.+ .++.+.+.+++++ ++.+++||+|+|.. +
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga~V~giD~~~~~i~~a~-~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e-~ 143 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCR-ALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLS-V 143 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEES-C
T ss_pred CCCeEEEECCCCcHHHHHHHhCCCEEEEECCCHHHHHHHH-HHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECc-c
Confidence 3458999999999999999974 5666666665554443 2333444 5789999998887 46678999999988 6
Q ss_pred ccccccHHH--HHHHHHHhcCCCcEEEEEe
Q 012961 290 IDWLQRDGI--LLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 290 l~~~~d~~~--~L~ei~RvLkPGG~lvi~~ 317 (452)
++|++++.. .+..+.+.|+++|..++..
T Consensus 144 ~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~ 173 (569)
T 4azs_A 144 FHHIVHLHGIDEVKRLLSRLADVTQAVILE 173 (569)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHSSEEEEE
T ss_pred hhcCCCHHHHHHHHHHHHHhccccceeeEE
Confidence 888887753 3556777788887666554
No 200
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.89 E-value=9.5e-09 Score=107.05 Aligned_cols=126 Identities=19% Similarity=0.191 Sum_probs=84.4
Q ss_pred CCCEEEEECCCCchHHHHHhh-----CCCccccCChhhhhHHHHHHHHHcCC-CeEEEEecCCCCC--CCCCCceEEEe-
Q 012961 215 NIRNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGI-PSTLGVLGTKRLP--YPSRSFELAHC- 285 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~-----~~v~~vdis~~dis~~~~~~A~~rg~-~~~~~~~d~~~lp--~~d~sFDlVv~- 285 (452)
++.+|||+|||+|..+..++. ..|+++|+++..+.... +.+...+. ++.+...|...++ +++++||+|++
T Consensus 259 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~-~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~D 337 (450)
T 2yxl_A 259 PGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLK-DFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLLD 337 (450)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHH-HHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEEE
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHH-HHHHHcCCCcEEEEEcChhhcchhhccCCCCEEEEc
Confidence 345899999999999999886 24677777666554433 22333354 6788888888776 55578999996
Q ss_pred ----ccccccccccH----------------HHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhC-CCE
Q 012961 286 ----SRCRIDWLQRD----------------GILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSM-CWK 344 (452)
Q Consensus 286 ----s~~~l~~~~d~----------------~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~-Gf~ 344 (452)
...+++..++. ..+|.++.++|||||++++++...... + .-+.+..++++. +|+
T Consensus 338 ~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~~~--e---ne~~v~~~l~~~~~~~ 412 (450)
T 2yxl_A 338 APCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIFKE--E---NEKNIRWFLNVHPEFK 412 (450)
T ss_dssp CCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCGG--G---THHHHHHHHHHCSSCE
T ss_pred CCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCChh--h---HHHHHHHHHHhCCCCE
Confidence 22233322221 468999999999999999987544311 1 123456666665 787
Q ss_pred EE
Q 012961 345 IV 346 (452)
Q Consensus 345 ~v 346 (452)
.+
T Consensus 413 ~~ 414 (450)
T 2yxl_A 413 LV 414 (450)
T ss_dssp EC
T ss_pred Ee
Confidence 54
No 201
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.89 E-value=3.8e-09 Score=96.22 Aligned_cols=92 Identities=16% Similarity=0.092 Sum_probs=64.6
Q ss_pred CCEEEEECCCCchHHHHHhhC-------------CCccccCChhhhhHHHHHHHHHcCCCeEEE-EecCCCCC-------
Q 012961 216 IRNVLDVGCGVASFGAYLLSH-------------DIIAMSLAPNDVHENQIQFALERGIPSTLG-VLGTKRLP------- 274 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~-------------~v~~vdis~~dis~~~~~~A~~rg~~~~~~-~~d~~~lp------- 274 (452)
..+|||||||+|.++..|++. .|+++|+++.. ...++.+. .+|....+
T Consensus 23 ~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~~~~~~~~~~d~~~~~~~~~~~~ 91 (196)
T 2nyu_A 23 GLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PLEGATFLCPADVTDPRTSQRILE 91 (196)
T ss_dssp TCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CCTTCEEECSCCTTSHHHHHHHHH
T ss_pred CCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cCCCCeEEEeccCCCHHHHHHHHH
Confidence 458999999999999998863 36677776632 01346667 67765432
Q ss_pred -CCCCCceEEEeccc---cccccccH-------HHHHHHHHHhcCCCcEEEEEeC
Q 012961 275 -YPSRSFELAHCSRC---RIDWLQRD-------GILLLELDRLLRPGGYFVYSSP 318 (452)
Q Consensus 275 -~~d~sFDlVv~s~~---~l~~~~d~-------~~~L~ei~RvLkPGG~lvi~~p 318 (452)
+++++||+|+|..+ ..++..+. ..+++++.++|||||.+++...
T Consensus 92 ~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 146 (196)
T 2nyu_A 92 VLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW 146 (196)
T ss_dssp HSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred hcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence 34568999998542 22333333 4689999999999999999864
No 202
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.88 E-value=4.3e-09 Score=105.04 Aligned_cols=99 Identities=13% Similarity=0.107 Sum_probs=67.9
Q ss_pred CCCEEEEECCCCchHHHHHhh-----CCCccccCChhhhhHHHHHHHHHc-----------CCCeEEEEecCCCC--CCC
Q 012961 215 NIRNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALER-----------GIPSTLGVLGTKRL--PYP 276 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~-----~~v~~vdis~~dis~~~~~~A~~r-----------g~~~~~~~~d~~~l--p~~ 276 (452)
+..+|||+|||+|.++..|+. ..|+++|+++..+..+..+..... ..++.+..+|...+ +++
T Consensus 105 ~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~ 184 (336)
T 2b25_A 105 PGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDIK 184 (336)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC----
T ss_pred CCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccccC
Confidence 345899999999999998875 346777777666555443332210 14688899998776 566
Q ss_pred CCCceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012961 277 SRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPE 319 (452)
Q Consensus 277 d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~ 319 (452)
+++||+|++.. .++..++.++.++|+|||.+++..+.
T Consensus 185 ~~~fD~V~~~~------~~~~~~l~~~~~~LkpgG~lv~~~~~ 221 (336)
T 2b25_A 185 SLTFDAVALDM------LNPHVTLPVFYPHLKHGGVCAVYVVN 221 (336)
T ss_dssp ---EEEEEECS------SSTTTTHHHHGGGEEEEEEEEEEESS
T ss_pred CCCeeEEEECC------CCHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 77899999754 22334899999999999999987753
No 203
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.86 E-value=1.4e-09 Score=101.51 Aligned_cols=97 Identities=14% Similarity=0.150 Sum_probs=68.5
Q ss_pred CEEEEECCCCchHHHHHhhC-----CCccccCChhhhhHHHHHHHHHcCC--CeEEEEecCCCC-C-CC----CCCceEE
Q 012961 217 RNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRL-P-YP----SRSFELA 283 (452)
Q Consensus 217 ~~VLDIGCG~G~~~~~La~~-----~v~~vdis~~dis~~~~~~A~~rg~--~~~~~~~d~~~l-p-~~----d~sFDlV 283 (452)
.+|||||||+|.++..|+.. .|+++|+++..+..+.. .+.+.+. ++.+..+|+.+. + +. .++||+|
T Consensus 66 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~-~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~v 144 (225)
T 3tr6_A 66 KKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKE-YWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDLI 144 (225)
T ss_dssp SEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHH-HHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEEE
T ss_pred CEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHH-HHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccEE
Confidence 48999999999999999864 46666666655544432 2223343 388888886433 2 11 1689999
Q ss_pred EeccccccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012961 284 HCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSP 318 (452)
Q Consensus 284 v~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p 318 (452)
++.. ...+...+++++.++|||||++++...
T Consensus 145 ~~~~----~~~~~~~~l~~~~~~L~pgG~lv~~~~ 175 (225)
T 3tr6_A 145 YIDA----DKANTDLYYEESLKLLREGGLIAVDNV 175 (225)
T ss_dssp EECS----CGGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred EECC----CHHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 9644 244567799999999999999998764
No 204
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.85 E-value=1.5e-09 Score=106.02 Aligned_cols=95 Identities=16% Similarity=0.168 Sum_probs=68.3
Q ss_pred CCCEEEEECCCCchHHHHHhhC-CCccccCChhhhhHHHHHHHHHc-------CCCeEEE--EecCCCCCCCCCCceEEE
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH-DIIAMSLAPNDVHENQIQFALER-------GIPSTLG--VLGTKRLPYPSRSFELAH 284 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~-~v~~vdis~~dis~~~~~~A~~r-------g~~~~~~--~~d~~~lp~~d~sFDlVv 284 (452)
+..+|||||||+|.++..+++. .|+++|+++ +... ++++ +.++.+. .+|+..++ +++||+|+
T Consensus 82 ~g~~VLDlGcGtG~~s~~la~~~~V~gVD~s~-m~~~-----a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~Vv 153 (276)
T 2wa2_A 82 LKGTVVDLGCGRGSWSYYAASQPNVREVKAYT-LGTS-----GHEKPRLVETFGWNLITFKSKVDVTKME--PFQADTVL 153 (276)
T ss_dssp CCEEEEEESCTTCHHHHHHHTSTTEEEEEEEC-CCCT-----TSCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSEEE
T ss_pred CCCEEEEeccCCCHHHHHHHHcCCEEEEECch-hhhh-----hhhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCEEE
Confidence 3458999999999999999874 788888887 3211 1111 1156777 78888776 67899999
Q ss_pred ecccccccccc----HH---HHHHHHHHhcCCCc--EEEEEeCC
Q 012961 285 CSRCRIDWLQR----DG---ILLLELDRLLRPGG--YFVYSSPE 319 (452)
Q Consensus 285 ~s~~~l~~~~d----~~---~~L~ei~RvLkPGG--~lvi~~p~ 319 (452)
|..+ ++..+ .. .+|.++.++||||| .|++....
T Consensus 154 sd~~--~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 154 CDIG--ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp ECCC--CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred ECCC--cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 8763 22211 11 37899999999999 99986643
No 205
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.85 E-value=5.3e-09 Score=101.63 Aligned_cols=126 Identities=14% Similarity=0.094 Sum_probs=82.2
Q ss_pred CCCEEEEECCCCchHHHHHhh-----CCCccccCChhhhhHHHHHHHHHcCC-CeEEEEecCCCCCC----CCCCceEEE
Q 012961 215 NIRNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGI-PSTLGVLGTKRLPY----PSRSFELAH 284 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~-----~~v~~vdis~~dis~~~~~~A~~rg~-~~~~~~~d~~~lp~----~d~sFDlVv 284 (452)
++.+|||+|||+|..+..+++ ..|+++|+++..+.... +.++..+. ++.+...|...++. .+++||+|+
T Consensus 83 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~-~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~Vl 161 (274)
T 3ajd_A 83 EDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALK-SNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKIL 161 (274)
T ss_dssp TTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHH-HHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHH-HHHHHhCCCcEEEEeCChHhcchhhhhccccCCEEE
Confidence 345899999999999998885 35777777766654443 33333344 67888888776654 257899999
Q ss_pred ecc-----cccc------------ccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHh-CCCEEE
Q 012961 285 CSR-----CRID------------WLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKS-MCWKIV 346 (452)
Q Consensus 285 ~s~-----~~l~------------~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~-~Gf~~v 346 (452)
+.. ..++ .......+++++.++|||||++++++........+ +.+..++++ .+|+++
T Consensus 162 ~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~ene-----~~v~~~l~~~~~~~~~ 236 (274)
T 3ajd_A 162 LDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEENE-----EVIKYILQKRNDVELI 236 (274)
T ss_dssp EEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTTSSH-----HHHHHHHHHCSSEEEE
T ss_pred EcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChHHhH-----HHHHHHHHhCCCcEEe
Confidence 751 0111 11344679999999999999999987654322221 234555543 456554
No 206
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.84 E-value=4.7e-09 Score=110.29 Aligned_cols=98 Identities=16% Similarity=0.179 Sum_probs=70.5
Q ss_pred CCCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcC--CCeEEEEecCCCCCCCCCCceEEEecccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERG--IPSTLGVLGTKRLPYPSRSFELAHCSRCR 289 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg--~~~~~~~~d~~~lp~~d~sFDlVv~s~~~ 289 (452)
+..+|||||||+|.++..+++. .|+++|+++ ++..+ .+.+...+ .++.+..+|+.+++++ ++||+|++.. .
T Consensus 158 ~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A-~~~~~~~gl~~~v~~~~~d~~~~~~~-~~fD~Ivs~~-~ 233 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHA-EVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEP-M 233 (480)
T ss_dssp TTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHH-HHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCC-C
T ss_pred CCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHH-HHHHHHcCCCCcEEEEECchhhCccC-CCeEEEEEeC-c
Confidence 3458999999999999998864 466777665 44222 23333444 3589999999888776 5899999865 3
Q ss_pred cccc--ccHHHHHHHHHHhcCCCcEEEEE
Q 012961 290 IDWL--QRDGILLLELDRLLRPGGYFVYS 316 (452)
Q Consensus 290 l~~~--~d~~~~L~ei~RvLkPGG~lvi~ 316 (452)
+++. ++....+.++.++|||||++++.
T Consensus 234 ~~~~~~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 234 GYMLFNERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp HHHHTCHHHHHHHHHGGGGEEEEEEEESC
T ss_pred hHhcCcHHHHHHHHHHHHhcCCCCEEEEE
Confidence 3443 33355777899999999999953
No 207
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.84 E-value=3.6e-09 Score=102.80 Aligned_cols=100 Identities=15% Similarity=0.131 Sum_probs=68.0
Q ss_pred CCCEEEEECCCCchHHHHHhh-CCCccccCChhhhhHHHHH-H-HHHcCCCeEEE--EecCCCCCCCCCCceEEEecccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLS-HDIIAMSLAPNDVHENQIQ-F-ALERGIPSTLG--VLGTKRLPYPSRSFELAHCSRCR 289 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~-~~v~~vdis~~dis~~~~~-~-A~~rg~~~~~~--~~d~~~lp~~d~sFDlVv~s~~~ 289 (452)
+..+|||||||+|.++..+++ ..|+++|+++ +...+..+ . +...+.++.+. .+|+..++ +++||+|+|..+
T Consensus 74 ~g~~VLDlGcGtG~~s~~la~~~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V~sd~~- 149 (265)
T 2oxt_A 74 LTGRVVDLGCGRGGWSYYAASRPHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP--VERTDVIMCDVG- 149 (265)
T ss_dssp CCEEEEEESCTTSHHHHHHHTSTTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCSEEEECCC-
T ss_pred CCCEEEEeCcCCCHHHHHHHHcCcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC--CCCCcEEEEeCc-
Confidence 345899999999999999987 4788888887 32110000 0 00011146777 78888776 678999998753
Q ss_pred cccccc----HH---HHHHHHHHhcCCCc--EEEEEeCC
Q 012961 290 IDWLQR----DG---ILLLELDRLLRPGG--YFVYSSPE 319 (452)
Q Consensus 290 l~~~~d----~~---~~L~ei~RvLkPGG--~lvi~~p~ 319 (452)
++..+ .. .+|.++.++||||| .|++....
T Consensus 150 -~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 150 -ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp -CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred -ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 32211 11 37899999999999 99986643
No 208
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.84 E-value=1e-09 Score=104.97 Aligned_cols=98 Identities=10% Similarity=-0.010 Sum_probs=73.7
Q ss_pred CCEEEEECCCCchHHHHHhh-----CCCccccCChhhhhHHHHHHHHHcCC--CeEEEEecCCCC-CCC-----CCCceE
Q 012961 216 IRNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRL-PYP-----SRSFEL 282 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~-----~~v~~vdis~~dis~~~~~~A~~rg~--~~~~~~~d~~~l-p~~-----d~sFDl 282 (452)
+.+|||||||+|..+..|+. ..|+++|+++..+..+... +...+. ++.+..+|+.+. +.. +++||+
T Consensus 61 ~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~-~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~ 139 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPY-WREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDF 139 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHH-HHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEE
T ss_pred cCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHH-HHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeE
Confidence 35899999999999999986 2588899988877666533 333443 588898887553 221 478999
Q ss_pred EEeccccccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012961 283 AHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSP 318 (452)
Q Consensus 283 Vv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p 318 (452)
|++... ..+...+++++.++|||||++++...
T Consensus 140 V~~d~~----~~~~~~~l~~~~~~LkpGG~lv~d~~ 171 (242)
T 3r3h_A 140 IFIDAD----KTNYLNYYELALKLVTPKGLIAIDNI 171 (242)
T ss_dssp EEEESC----GGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred EEEcCC----hHHhHHHHHHHHHhcCCCeEEEEECC
Confidence 997542 34556789999999999999998654
No 209
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.84 E-value=1.4e-08 Score=97.93 Aligned_cols=130 Identities=10% Similarity=0.066 Sum_probs=88.6
Q ss_pred CCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEecccccc
Q 012961 216 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRID 291 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~ 291 (452)
+.+|||||||+|-++..++.. .++++|+++.++.-.. .++...|.+..+.+.|...-+. .+.||+|++.- ++|
T Consensus 133 p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~-~~l~~~g~~~~~~v~D~~~~~p-~~~~DvaL~lk-ti~ 209 (281)
T 3lcv_B 133 PNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVD-EALTRLNVPHRTNVADLLEDRL-DEPADVTLLLK-TLP 209 (281)
T ss_dssp CSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHH-HHHHHTTCCEEEEECCTTTSCC-CSCCSEEEETT-CHH
T ss_pred CceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHH-HHHHhcCCCceEEEeeecccCC-CCCcchHHHHH-HHH
Confidence 568999999999999988753 6777877776664444 3333447888888888765554 47899999776 788
Q ss_pred ccccHH--HHHHHHHHhcCCCcEEEEEeCC-CCCCChhhHHHH-HHHHHHHHhCCCEEEEEE
Q 012961 292 WLQRDG--ILLLELDRLLRPGGYFVYSSPE-AYAHDPENRRIW-NAMYDLLKSMCWKIVSKK 349 (452)
Q Consensus 292 ~~~d~~--~~L~ei~RvLkPGG~lvi~~p~-~~~~~~~~~~~~-~~l~~ll~~~Gf~~v~~~ 349 (452)
++++.+ ..+ ++.+.|+|+|.++-.... .-.+.+.....+ ..++..+.+.||.+.+.+
T Consensus 210 ~Le~q~kg~g~-~ll~aL~~~~vvVSfp~ksl~Grs~gm~~~Y~~~~e~~~~~~g~~~~~~~ 270 (281)
T 3lcv_B 210 CLETQQRGSGW-EVIDIVNSPNIVVTFPTKSLGQRSKGMFQNYSQSFESQARERSCRIQRLE 270 (281)
T ss_dssp HHHHHSTTHHH-HHHHHSSCSEEEEEEECC-------CHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred HhhhhhhHHHH-HHHHHhCCCCEEEeccchhhcCCCcchhhHHHHHHHHHHHhcCCceeeee
Confidence 876652 345 999999999988854331 112233333333 577888988999655443
No 210
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.83 E-value=4e-08 Score=90.37 Aligned_cols=122 Identities=9% Similarity=0.019 Sum_probs=80.2
Q ss_pred CCCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEecccccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRID 291 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~ 291 (452)
+..+|||+|||+|.++..++.. .++++|+++..+..+. +.+...+.++.+..+|+..++ ++||+|+++.. ++
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~-~~~~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p-~~ 123 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLI-ENLGEFKGKFKVFIGDVSEFN---SRVDIVIMNPP-FG 123 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHH-HHTGGGTTSEEEEESCGGGCC---CCCSEEEECCC-CS
T ss_pred CcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHH-HHHHHcCCCEEEEECchHHcC---CCCCEEEEcCC-Cc
Confidence 3458999999999999999874 3566666554443332 112222447889999988875 48999998763 33
Q ss_pred ccc--cHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEEEec
Q 012961 292 WLQ--RDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKDQ 351 (452)
Q Consensus 292 ~~~--d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~~ 351 (452)
... ....+++++.++| ||.+++..+. ....+.+.+.+++.||++......
T Consensus 124 ~~~~~~~~~~l~~~~~~l--~~~~~~~~~~--------~~~~~~~~~~l~~~g~~~~~~~~~ 175 (207)
T 1wy7_A 124 SQRKHADRPFLLKAFEIS--DVVYSIHLAK--------PEVRRFIEKFSWEHGFVVTHRLTT 175 (207)
T ss_dssp SSSTTTTHHHHHHHHHHC--SEEEEEEECC--------HHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred cccCCchHHHHHHHHHhc--CcEEEEEeCC--------cCCHHHHHHHHHHCCCeEEEEEEE
Confidence 332 2356899999999 6655543211 122455777889999987655443
No 211
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.83 E-value=4e-09 Score=97.21 Aligned_cols=114 Identities=11% Similarity=0.024 Sum_probs=75.9
Q ss_pred CCCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCC-----------CCCce
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYP-----------SRSFE 281 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~-----------d~sFD 281 (452)
+..+|||+|||+|.++..+++. .|+++|+++.. ...++.+..+|+...+.. .++||
T Consensus 25 ~g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~-----------~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D 93 (191)
T 3dou_A 25 KGDAVIEIGSSPGGWTQVLNSLARKIISIDLQEME-----------EIAGVRFIRCDIFKETIFDDIDRALREEGIEKVD 93 (191)
T ss_dssp TTCEEEEESCTTCHHHHHHTTTCSEEEEEESSCCC-----------CCTTCEEEECCTTSSSHHHHHHHHHHHHTCSSEE
T ss_pred CCCEEEEEeecCCHHHHHHHHcCCcEEEEeccccc-----------cCCCeEEEEccccCHHHHHHHHHHhhcccCCcce
Confidence 3458999999999999999874 57788887642 123678889998776421 14899
Q ss_pred EEEecccc---ccccc-------cHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEE
Q 012961 282 LAHCSRCR---IDWLQ-------RDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSK 348 (452)
Q Consensus 282 lVv~s~~~---l~~~~-------d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~ 348 (452)
+|+|.... -.+.. ....++.++.++|||||.|++...... ....+...++. .|..+..
T Consensus 94 ~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~--------~~~~~~~~l~~-~F~~v~~ 161 (191)
T 3dou_A 94 DVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGD--------MTNDFIAIWRK-NFSSYKI 161 (191)
T ss_dssp EEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECST--------HHHHHHHHHGG-GEEEEEE
T ss_pred EEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCC--------CHHHHHHHHHH-hcCEEEE
Confidence 99985310 01111 124588999999999999998663221 12455566644 4765543
No 212
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.81 E-value=5.1e-09 Score=104.14 Aligned_cols=100 Identities=15% Similarity=0.079 Sum_probs=66.9
Q ss_pred CCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHc---------CCCeEEEEecCCC-CCCCCCCce
Q 012961 216 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALER---------GIPSTLGVLGTKR-LPYPSRSFE 281 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~r---------g~~~~~~~~d~~~-lp~~d~sFD 281 (452)
+.+|||||||+|.++..+++. .|+++|+ ++.+++.|+++ ..++.+..+|+.. ++..+++||
T Consensus 109 ~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDi-----d~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD 183 (314)
T 2b2c_A 109 PKRVLIIGGGDGGILREVLKHESVEKVTMCEI-----DEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFD 183 (314)
T ss_dssp CCEEEEESCTTSHHHHHHTTCTTCCEEEEECS-----CHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEE
T ss_pred CCEEEEEcCCcCHHHHHHHHcCCCCEEEEEEC-----CHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCce
Confidence 468999999999999999864 3455554 45555555543 2357888888654 333457899
Q ss_pred EEEeccccccccccH----HHHHHHHHHhcCCCcEEEEEeCCCC
Q 012961 282 LAHCSRCRIDWLQRD----GILLLELDRLLRPGGYFVYSSPEAY 321 (452)
Q Consensus 282 lVv~s~~~l~~~~d~----~~~L~ei~RvLkPGG~lvi~~p~~~ 321 (452)
+|++.. ..++.+.. ..+++++.++|+|||.+++.....+
T Consensus 184 ~Ii~d~-~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~ 226 (314)
T 2b2c_A 184 VIITDS-SDPVGPAESLFGQSYYELLRDALKEDGILSSQGESVW 226 (314)
T ss_dssp EEEECC-C-------------HHHHHHHHEEEEEEEEEECCCTT
T ss_pred EEEEcC-CCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECCCcc
Confidence 999754 22222221 5689999999999999999864443
No 213
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.81 E-value=3.9e-09 Score=99.37 Aligned_cols=97 Identities=12% Similarity=0.170 Sum_probs=68.8
Q ss_pred CCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHcCC--CeEEEEecCCCC-CCC--CCCceEEEec
Q 012961 216 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRL-PYP--SRSFELAHCS 286 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg~--~~~~~~~d~~~l-p~~--d~sFDlVv~s 286 (452)
..+|||||||+|.++..++.. .|+++|+++..+..+... ....+. ++.+..+|.... +.. +++||+|++.
T Consensus 55 ~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~-~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 133 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKH-VKALGLESRIELLFGDALQLGEKLELYPLFDVLFID 133 (233)
T ss_dssp CSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHH-HHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEEE
T ss_pred CCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHH-HHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEEC
Confidence 348999999999999998863 466666665554433322 222243 478888887663 322 4789999976
Q ss_pred cccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 287 RCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 287 ~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
.. ..+...+++++.++|+|||++++.+
T Consensus 134 ~~----~~~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 134 AA----KGQYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp GG----GSCHHHHHHHHGGGEEEEEEEEEET
T ss_pred CC----HHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 52 2356789999999999999999975
No 214
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.80 E-value=2.1e-08 Score=102.40 Aligned_cols=128 Identities=11% Similarity=0.033 Sum_probs=88.6
Q ss_pred CCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcCC---CeEEEEecCCCC-CC---CCCCceEEEe
Q 012961 216 IRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI---PSTLGVLGTKRL-PY---PSRSFELAHC 285 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg~---~~~~~~~d~~~l-p~---~d~sFDlVv~ 285 (452)
..+|||+|||+|.++..++.. .|+++|+++.++..+.. .++..+. ++.+..+|+.+. +. ...+||+|++
T Consensus 213 ~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~-N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~ 291 (385)
T 2b78_A 213 GKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLA-HFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIII 291 (385)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHH-HHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHH-HHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEEE
Confidence 348999999999999999872 58889988888766653 3344443 688999887552 21 2358999998
Q ss_pred cccc--------ccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEE
Q 012961 286 SRCR--------IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVS 347 (452)
Q Consensus 286 s~~~--------l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~ 347 (452)
..-. .....+...++.++.++|+|||+++++...... . ....++.+...+...|++++.
T Consensus 292 DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~-~--~~~~~~~i~~~~~~~g~~~~~ 358 (385)
T 2b78_A 292 DPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANM-T--VSQFKKQIEKGFGKQKHTYLD 358 (385)
T ss_dssp CCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTS-C--HHHHHHHHHHHHTTCCCEEEE
T ss_pred CCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcC-C--HHHHHHHHHHHHHHcCCcEEE
Confidence 4321 222233455788899999999999998755432 1 112345667778889988443
No 215
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.80 E-value=8e-09 Score=101.77 Aligned_cols=104 Identities=11% Similarity=0.038 Sum_probs=68.8
Q ss_pred CCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHH--H--cCCCeEEEEecCCC-CCCCCCCceEEEec
Q 012961 216 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFAL--E--RGIPSTLGVLGTKR-LPYPSRSFELAHCS 286 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~--~--rg~~~~~~~~d~~~-lp~~d~sFDlVv~s 286 (452)
+.+|||||||+|.++..+++. .|+++|+++..+..+...+.. . ...++.+..+|+.. ++..+++||+|++.
T Consensus 91 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d 170 (296)
T 1inl_A 91 PKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIIID 170 (296)
T ss_dssp CCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEEc
Confidence 468999999999999999864 456666665554433322211 0 13468888888654 34345789999974
Q ss_pred cccccccc-----cHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012961 287 RCRIDWLQ-----RDGILLLELDRLLRPGGYFVYSSPEA 320 (452)
Q Consensus 287 ~~~l~~~~-----d~~~~L~ei~RvLkPGG~lvi~~p~~ 320 (452)
. ..++.. ....+++++.++|+|||.+++.....
T Consensus 171 ~-~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 208 (296)
T 1inl_A 171 S-TDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDP 208 (296)
T ss_dssp C-----------CCSHHHHHHHHHHEEEEEEEEEECCCT
T ss_pred C-CCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCc
Confidence 3 222111 12578999999999999999986543
No 216
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.80 E-value=8e-09 Score=100.69 Aligned_cols=126 Identities=12% Similarity=0.112 Sum_probs=80.8
Q ss_pred CCCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHH----cCCCeEEEEecCCC-CCCCCCCceEEEe
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALE----RGIPSTLGVLGTKR-LPYPSRSFELAHC 285 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~----rg~~~~~~~~d~~~-lp~~d~sFDlVv~ 285 (452)
++.+|||||||+|.++..+++. .|+++|+++..+..+...+..- ...++.+..+|+.. ++..+++||+|++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~ 154 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMV 154 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEE
Confidence 3468999999999999999864 3556665555443333222110 12468889988755 3334578999998
Q ss_pred cccccccccc----HHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEE
Q 012961 286 SRCRIDWLQR----DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIV 346 (452)
Q Consensus 286 s~~~l~~~~d----~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v 346 (452)
.. ..++.+. ...+++++.++|+|||.+++.....+.. ......+.+.+++. |..+
T Consensus 155 d~-~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~~----~~~~~~~~~~l~~~-F~~v 213 (275)
T 1iy9_A 155 DS-TEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFT----PELITNVQRDVKEI-FPIT 213 (275)
T ss_dssp SC-SSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTTTC----HHHHHHHHHHHHTT-CSEE
T ss_pred CC-CCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccc----HHHHHHHHHHHHHh-CCCe
Confidence 54 2222211 2569999999999999999986443321 23345566667766 5443
No 217
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.79 E-value=4.7e-09 Score=103.98 Aligned_cols=99 Identities=15% Similarity=0.158 Sum_probs=65.9
Q ss_pred CCEEEEECCCCchHHHHHhhC-CCccccC----ChhhhhHHHHHHHHHcC-CCeEEEEe-cCCCCCCCCCCceEEEeccc
Q 012961 216 IRNVLDVGCGVASFGAYLLSH-DIIAMSL----APNDVHENQIQFALERG-IPSTLGVL-GTKRLPYPSRSFELAHCSRC 288 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~-~v~~vdi----s~~dis~~~~~~A~~rg-~~~~~~~~-d~~~lp~~d~sFDlVv~s~~ 288 (452)
..+|||||||+|.++..+++. .|+++|+ +..++.... ....+ ..+.+... |+..++ .++||+|+|..+
T Consensus 83 g~~VLDlGcG~G~~s~~la~~~~V~gvD~~~~~~~~~~~~~~---~~~~~~~~v~~~~~~D~~~l~--~~~fD~V~sd~~ 157 (305)
T 2p41_A 83 EGKVVDLGCGRGGWSYYCGGLKNVREVKGLTKGGPGHEEPIP---MSTYGWNLVRLQSGVDVFFIP--PERCDTLLCDIG 157 (305)
T ss_dssp CEEEEEETCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCC---CCSTTGGGEEEECSCCTTTSC--CCCCSEEEECCC
T ss_pred CCEEEEEcCCCCHHHHHHHhcCCEEEEeccccCchhHHHHHH---hhhcCCCCeEEEeccccccCC--cCCCCEEEECCc
Confidence 458999999999999999875 5788887 332221100 01111 24667766 666654 568999998653
Q ss_pred c--ccccccHH---HHHHHHHHhcCCCcEEEEEeCC
Q 012961 289 R--IDWLQRDG---ILLLELDRLLRPGGYFVYSSPE 319 (452)
Q Consensus 289 ~--l~~~~d~~---~~L~ei~RvLkPGG~lvi~~p~ 319 (452)
. .++..+.. .+|.++.++|||||.|++....
T Consensus 158 ~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~ 193 (305)
T 2p41_A 158 ESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLN 193 (305)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESC
T ss_pred cccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 2 12333322 4789999999999999986643
No 218
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.79 E-value=9.6e-09 Score=104.57 Aligned_cols=96 Identities=14% Similarity=0.157 Sum_probs=72.7
Q ss_pred CCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcCC--CeEEEEecCCCCCCCCCCceEEEecc--c
Q 012961 216 IRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSR--C 288 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg~--~~~~~~~d~~~lp~~d~sFDlVv~s~--~ 288 (452)
.++|||||||+|.++..++++ .|+++|.++ ++ ..+.+.++..+. .+.++.++.+++.++ +.||+|+|-. .
T Consensus 84 ~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~-~~a~~~~~~n~~~~~i~~i~~~~~~~~lp-e~~DvivsE~~~~ 160 (376)
T 4hc4_A 84 GKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IW-QQAREVVRFNGLEDRVHVLPGPVETVELP-EQVDAIVSEWMGY 160 (376)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-TH-HHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCBT
T ss_pred CCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HH-HHHHHHHHHcCCCceEEEEeeeeeeecCC-ccccEEEeecccc
Confidence 458999999999999888763 589999885 34 334455666554 488899999999887 6799999732 1
Q ss_pred cccccccHHHHHHHHHHhcCCCcEEE
Q 012961 289 RIDWLQRDGILLLELDRLLRPGGYFV 314 (452)
Q Consensus 289 ~l~~~~d~~~~L~ei~RvLkPGG~lv 314 (452)
.+.+......++....|.|||||.++
T Consensus 161 ~l~~e~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 161 GLLHESMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp TBTTTCSHHHHHHHHHHHEEEEEEEE
T ss_pred cccccchhhhHHHHHHhhCCCCceEC
Confidence 23333455778999999999999988
No 219
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.78 E-value=3.8e-09 Score=104.93 Aligned_cols=123 Identities=12% Similarity=0.108 Sum_probs=79.5
Q ss_pred CCCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHH-Hc----CCCeEEEEecCCC-CCCCCCCceEEE
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFAL-ER----GIPSTLGVLGTKR-LPYPSRSFELAH 284 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~-~r----g~~~~~~~~d~~~-lp~~d~sFDlVv 284 (452)
.+.+|||||||+|.++..+++. .++++|+++..+..+...+.. .. ..++.+..+|+.. ++..+++||+|+
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVI 156 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEE
Confidence 3468999999999999999874 456666666555443322221 01 2468888888765 333467899999
Q ss_pred eccccccc---cc--c--HHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhC
Q 012961 285 CSRCRIDW---LQ--R--DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSM 341 (452)
Q Consensus 285 ~s~~~l~~---~~--d--~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~ 341 (452)
+.. ..++ .+ . ...+++++.++|+|||.+++.....+.. .......+.+.+++.
T Consensus 157 ~d~-~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~---~~~~~~~~~~~l~~~ 216 (314)
T 1uir_A 157 IDL-TDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMILLT---HHRVHPVVHRTVREA 216 (314)
T ss_dssp EEC-CCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEECC------CHHHHHHHHHHTT
T ss_pred ECC-CCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccCcccc---CHHHHHHHHHHHHHH
Confidence 865 3443 11 1 2679999999999999999875332211 112345566666666
No 220
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.78 E-value=7e-09 Score=103.43 Aligned_cols=120 Identities=15% Similarity=0.137 Sum_probs=77.0
Q ss_pred CCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHc---------CCCeEEEEecCCC-CCCCCCCceEEEe
Q 012961 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER---------GIPSTLGVLGTKR-LPYPSRSFELAHC 285 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~r---------g~~~~~~~~d~~~-lp~~d~sFDlVv~ 285 (452)
+.+|||||||+|.++..+++.. .+..+...|+++.+++.|+++ ..++.+...|... ++..+++||+|++
T Consensus 117 ~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~ 195 (321)
T 2pt6_A 117 PKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 195 (321)
T ss_dssp CCEEEEEECTTCHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEE
Confidence 4589999999999999998641 122333344555555555543 2357888888654 2333578999997
Q ss_pred ccccccccc--cH--HHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhC
Q 012961 286 SRCRIDWLQ--RD--GILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSM 341 (452)
Q Consensus 286 s~~~l~~~~--d~--~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~ 341 (452)
.. ..++.+ .. ..+++++.++|+|||++++.....+.. ......+.+.+++.
T Consensus 196 d~-~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~----~~~~~~~~~~l~~~ 250 (321)
T 2pt6_A 196 DS-SDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIH----VGTIKNMIGYAKKL 250 (321)
T ss_dssp EC-CCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCTTTC----HHHHHHHHHHHHTT
T ss_pred CC-cCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccC----HHHHHHHHHHHHHH
Confidence 54 222211 11 679999999999999999976544321 12344555556665
No 221
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.78 E-value=4.3e-09 Score=100.86 Aligned_cols=97 Identities=12% Similarity=0.097 Sum_probs=69.8
Q ss_pred CCEEEEECCCCchHHHHHhhC-----CCccccCChhhhhHHHHHHHHHcCC--CeEEEEecCCCC-C-C-----CCCCce
Q 012961 216 IRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRL-P-Y-----PSRSFE 281 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~-----~v~~vdis~~dis~~~~~~A~~rg~--~~~~~~~d~~~l-p-~-----~d~sFD 281 (452)
+.+|||||||+|..+..|+.. .++++|+++..+..+. +...+.+. ++.+..+|+.+. + + ++++||
T Consensus 80 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~-~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD 158 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGL-PVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYD 158 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHH-HHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBS
T ss_pred cCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-HHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEE
Confidence 358999999999999998752 5677777776654444 22233343 478888886543 3 1 147899
Q ss_pred EEEeccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 282 LAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 282 lVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
+|++... ..+...+++++.++|||||++++..
T Consensus 159 ~V~~d~~----~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 159 FIFVDAD----KDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp EEEECSC----STTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred EEEEcCc----hHHHHHHHHHHHHhCCCCeEEEEec
Confidence 9997542 3455779999999999999999865
No 222
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.78 E-value=5.5e-09 Score=103.41 Aligned_cols=106 Identities=12% Similarity=0.101 Sum_probs=69.3
Q ss_pred CCCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHH----cCCCeEEEEecCCC-CCCCCCCceEEEe
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALE----RGIPSTLGVLGTKR-LPYPSRSFELAHC 285 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~----rg~~~~~~~~d~~~-lp~~d~sFDlVv~ 285 (452)
.+.+|||||||+|.++..+++. .|+++|+++..+..+...+..- ...++.+...|+.. ++..+++||+|++
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii~ 174 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIIT 174 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEEE
Confidence 3468999999999999999864 3566666555543333222110 13468888888654 3444678999997
Q ss_pred cccccccccc----HHHHHHHHHHhcCCCcEEEEEeCCCC
Q 012961 286 SRCRIDWLQR----DGILLLELDRLLRPGGYFVYSSPEAY 321 (452)
Q Consensus 286 s~~~l~~~~d----~~~~L~ei~RvLkPGG~lvi~~p~~~ 321 (452)
.. ..++.+. ...+++++.++|+|||.+++.....+
T Consensus 175 d~-~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~ 213 (304)
T 2o07_A 175 DS-SDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQW 213 (304)
T ss_dssp EC-C-----------CHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred CC-CCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCCcc
Confidence 54 2322211 24589999999999999999764433
No 223
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.78 E-value=7.7e-09 Score=101.19 Aligned_cols=125 Identities=15% Similarity=0.147 Sum_probs=79.6
Q ss_pred CCCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHc---------CCCeEEEEecCCCC-CCCCCCceEEE
Q 012961 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER---------GIPSTLGVLGTKRL-PYPSRSFELAH 284 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~r---------g~~~~~~~~d~~~l-p~~d~sFDlVv 284 (452)
++.+|||||||+|.++..+++.. ....+...|+++.+++.|++. ..++.+...|.... +..+++||+|+
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCeEEEEeCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 34689999999999999998641 112333444555555666554 24578888886543 22357899999
Q ss_pred ecccccccccc--H--HHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEE
Q 012961 285 CSRCRIDWLQR--D--GILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIV 346 (452)
Q Consensus 285 ~s~~~l~~~~d--~--~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v 346 (452)
+.. ..++.+. . ..+++++.++|+|||.+++.....+... .....+.+.+++. |..+
T Consensus 157 ~d~-~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~----~~~~~~~~~l~~~-F~~v 216 (283)
T 2i7c_A 157 VDS-SDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHV----GTIKNMIGYAKKL-FKKV 216 (283)
T ss_dssp EEC-CCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCCTTTCH----HHHHHHHHHHHTT-CSEE
T ss_pred EcC-CCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCCcccCH----HHHHHHHHHHHHH-CCce
Confidence 743 2333222 1 5799999999999999999865443221 2234455555554 5433
No 224
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.77 E-value=8.3e-09 Score=97.59 Aligned_cols=98 Identities=19% Similarity=0.164 Sum_probs=68.1
Q ss_pred CCEEEEECCCCchHHHHHhhC-----CCccccCChhhhhHHHHHHHHHcCC--CeEEEEecCCC----CCCCC--CCceE
Q 012961 216 IRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKR----LPYPS--RSFEL 282 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~-----~v~~vdis~~dis~~~~~~A~~rg~--~~~~~~~d~~~----lp~~d--~sFDl 282 (452)
..+|||||||+|..+..++.. .++++|+++..+..+.... .+.+. ++.+..+|+.+ ++..+ ++||+
T Consensus 73 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~-~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~ 151 (232)
T 3cbg_A 73 AKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYW-QKAGVAEKISLRLGPALATLEQLTQGKPLPEFDL 151 (232)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHH-HHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEE
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH-HHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCE
Confidence 348999999999999999863 4566666655544433222 22233 47788887533 33333 78999
Q ss_pred EEeccccccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012961 283 AHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSP 318 (452)
Q Consensus 283 Vv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p 318 (452)
|++... ..+...+++++.++|+|||++++...
T Consensus 152 V~~d~~----~~~~~~~l~~~~~~LkpgG~lv~~~~ 183 (232)
T 3cbg_A 152 IFIDAD----KRNYPRYYEIGLNLLRRGGLMVIDNV 183 (232)
T ss_dssp EEECSC----GGGHHHHHHHHHHTEEEEEEEEEECT
T ss_pred EEECCC----HHHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 997642 34557799999999999999998653
No 225
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.76 E-value=3.5e-08 Score=102.05 Aligned_cols=126 Identities=15% Similarity=0.138 Sum_probs=85.7
Q ss_pred CCCEEEEECCCCchHHHHHhh----CCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC--CCCCCceEEEe---
Q 012961 215 NIRNVLDVGCGVASFGAYLLS----HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP--YPSRSFELAHC--- 285 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~----~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp--~~d~sFDlVv~--- 285 (452)
++.+|||+|||+|..+..+++ ..|+++|+++..+.... +.+...+.++.+...|...++ +++++||+|++
T Consensus 246 ~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~-~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~P 324 (429)
T 1sqg_A 246 NGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVY-DNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAP 324 (429)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHH-HHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEECC
T ss_pred CcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HHHHHcCCCeEEEeCchhhchhhcccCCCCEEEEeCC
Confidence 345899999999999999986 35788888877665544 334444667888889988776 56678999995
Q ss_pred -c-cccccccccH----------------HHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhC-CCEEE
Q 012961 286 -S-RCRIDWLQRD----------------GILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSM-CWKIV 346 (452)
Q Consensus 286 -s-~~~l~~~~d~----------------~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~-Gf~~v 346 (452)
+ ...++..++. ..++.++.++|||||++++++...... ++ -+.+..++++. +|+++
T Consensus 325 csg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~--en---e~~v~~~l~~~~~~~~~ 399 (429)
T 1sqg_A 325 CSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPE--EN---SLQIKAFLQRTADAELC 399 (429)
T ss_dssp CCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGG--GT---HHHHHHHHHHCTTCEEC
T ss_pred CCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChh--hH---HHHHHHHHHhCCCCEEe
Confidence 2 1222222221 368999999999999999987543311 11 13455555554 67654
No 226
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.75 E-value=5.2e-08 Score=97.58 Aligned_cols=115 Identities=11% Similarity=0.111 Sum_probs=78.2
Q ss_pred CCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHcCC--CeEEEEecCCCCCCCCCCceEEEecccccc
Q 012961 216 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCRID 291 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg~--~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~ 291 (452)
..+|||+|||+|.++.. +.. .|+++|+++..+..+.. .++..+. ++.+..+|+..+. ++||+|++.. ..
T Consensus 196 ~~~VLDlg~G~G~~~l~-a~~~~~V~~vD~s~~ai~~a~~-n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dp--P~ 268 (336)
T 2yx1_A 196 NDVVVDMFAGVGPFSIA-CKNAKKIYAIDINPHAIELLKK-NIKLNKLEHKIIPILSDVREVD---VKGNRVIMNL--PK 268 (336)
T ss_dssp TCEEEETTCTTSHHHHH-TTTSSEEEEEESCHHHHHHHHH-HHHHTTCTTTEEEEESCGGGCC---CCEEEEEECC--TT
T ss_pred CCEEEEccCccCHHHHh-ccCCCEEEEEECCHHHHHHHHH-HHHHcCCCCcEEEEECChHHhc---CCCcEEEECC--cH
Confidence 45899999999999999 763 56777777766655443 3333343 5889999987765 7899999753 11
Q ss_pred ccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhC-CCEEEEEE
Q 012961 292 WLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSM-CWKIVSKK 349 (452)
Q Consensus 292 ~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~-Gf~~v~~~ 349 (452)
+ ...++.++.++|+|||.+++...... .+.+.+.+++. +++++..+
T Consensus 269 ~---~~~~l~~~~~~L~~gG~l~~~~~~~~---------~~~~~~~l~~~~~~~i~~~~ 315 (336)
T 2yx1_A 269 F---AHKFIDKALDIVEEGGVIHYYTIGKD---------FDKAIKLFEKKCDCEVLEKR 315 (336)
T ss_dssp T---GGGGHHHHHHHEEEEEEEEEEEEESS---------SHHHHHHHHHHSEEEEEEEE
T ss_pred h---HHHHHHHHHHHcCCCCEEEEEEeecC---------chHHHHHHHHhcCCcEEEEE
Confidence 1 13689999999999999998764332 12333444444 67665444
No 227
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.74 E-value=8.2e-09 Score=97.72 Aligned_cols=97 Identities=14% Similarity=0.174 Sum_probs=67.1
Q ss_pred CCEEEEECCCCchHHHHHhhC-----CCccccCChhhhhHHHHHHHHHcCC--CeEEEEecCCC-CC-------------
Q 012961 216 IRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKR-LP------------- 274 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~-----~v~~vdis~~dis~~~~~~A~~rg~--~~~~~~~d~~~-lp------------- 274 (452)
..+|||||||+|.++..++.. .++++|+++..+..+... ..+.+. ++.+..+|... ++
T Consensus 61 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~-~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 139 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKY-WKENGLENKIFLKLGSALETLQVLIDSKSAPSWAS 139 (239)
T ss_dssp CSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHH-HHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGT
T ss_pred cCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHH-HHHcCCCCCEEEEECCHHHHHHHHHhhcccccccc
Confidence 348999999999999998853 466666665554433322 222243 37788777543 12
Q ss_pred -CCC--CCceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 275 -YPS--RSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 275 -~~d--~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
|++ ++||+|++... ..+...+++++.++|+|||++++..
T Consensus 140 ~f~~~~~~fD~I~~~~~----~~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 140 DFAFGPSSIDLFFLDAD----KENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp TTCCSTTCEEEEEECSC----GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cccCCCCCcCEEEEeCC----HHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 333 78999997642 3445678999999999999999975
No 228
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.74 E-value=6e-09 Score=103.63 Aligned_cols=101 Identities=12% Similarity=0.116 Sum_probs=71.1
Q ss_pred CCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHc-----CCCeEEEEecCCCC--CCCCCCceEEEeccc
Q 012961 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER-----GIPSTLGVLGTKRL--PYPSRSFELAHCSRC 288 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~r-----g~~~~~~~~d~~~l--p~~d~sFDlVv~s~~ 288 (452)
..+|||||||+|.++..+++.. .++.+...|+++.+++.|++. ..++.++++|...+ .+++++||+|++..
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~-p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~- 167 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVY-PQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDV- 167 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHS-TTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECC-
T ss_pred CCEEEEEECCcCHHHHHHHHHC-CCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECC-
Confidence 3489999999999999998721 122344456666666777665 24588889987554 34567899999753
Q ss_pred cccc-cc---cHHHHHHHHHHhcCCCcEEEEEeC
Q 012961 289 RIDW-LQ---RDGILLLELDRLLRPGGYFVYSSP 318 (452)
Q Consensus 289 ~l~~-~~---d~~~~L~ei~RvLkPGG~lvi~~p 318 (452)
..++ .. ....+++++.++|+|||+|++...
T Consensus 168 ~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 168 FAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp STTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 2221 11 126799999999999999998764
No 229
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.74 E-value=9.1e-09 Score=100.53 Aligned_cols=97 Identities=14% Similarity=0.128 Sum_probs=66.6
Q ss_pred CCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHc---------------CCCeEEEEecCCCC-CCC
Q 012961 216 IRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALER---------------GIPSTLGVLGTKRL-PYP 276 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~r---------------g~~~~~~~~d~~~l-p~~ 276 (452)
+.+|||||||+|.++..+++. .++++|+++.. ++.|++. ..++.+...|+... +.
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~-----i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~- 149 (281)
T 1mjf_A 76 PKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDV-----IMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN- 149 (281)
T ss_dssp CCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHH-----HHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-
T ss_pred CCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHH-----HHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-
Confidence 458999999999999999875 45556555544 4444432 24578888886442 22
Q ss_pred CCCceEEEeccccccccc--c--HHHHHHHHHHhcCCCcEEEEEeCC
Q 012961 277 SRSFELAHCSRCRIDWLQ--R--DGILLLELDRLLRPGGYFVYSSPE 319 (452)
Q Consensus 277 d~sFDlVv~s~~~l~~~~--d--~~~~L~ei~RvLkPGG~lvi~~p~ 319 (452)
+++||+|++.. ..++.. . ...+++++.++|+|||.+++....
T Consensus 150 ~~~fD~Ii~d~-~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~ 195 (281)
T 1mjf_A 150 NRGFDVIIADS-TDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGS 195 (281)
T ss_dssp CCCEEEEEEEC-CCCC-----TTSHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred cCCeeEEEECC-CCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 57899999754 222211 1 256899999999999999997543
No 230
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.72 E-value=1.3e-08 Score=98.70 Aligned_cols=93 Identities=16% Similarity=0.143 Sum_probs=67.2
Q ss_pred CCCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHc---------CCCeEEEEecCCCCCCCCCCceEEEe
Q 012961 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER---------GIPSTLGVLGTKRLPYPSRSFELAHC 285 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~r---------g~~~~~~~~d~~~lp~~d~sFDlVv~ 285 (452)
.+.+|||||||+|.++..++... ..+...|+++.+++.|++. ..++.+..+|...+. ++||+|++
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~---~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~ 145 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYD---THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFC 145 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSS---CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHhCC---CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEE
Confidence 34689999999999999888751 2344445555555555433 245788888877654 78999997
Q ss_pred ccccccccccHHHHHHHHHHhcCCCcEEEEEeCC
Q 012961 286 SRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPE 319 (452)
Q Consensus 286 s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~ 319 (452)
.. .++..+++++.++|+|||.+++....
T Consensus 146 d~------~dp~~~~~~~~~~L~pgG~lv~~~~~ 173 (262)
T 2cmg_A 146 LQ------EPDIHRIDGLKRMLKEDGVFISVAKH 173 (262)
T ss_dssp SS------CCCHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred CC------CChHHHHHHHHHhcCCCcEEEEEcCC
Confidence 53 34455999999999999999997533
No 231
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.72 E-value=4e-08 Score=96.17 Aligned_cols=117 Identities=13% Similarity=0.135 Sum_probs=75.9
Q ss_pred cHHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcCC--CeEE
Q 012961 191 GADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI--PSTL 265 (452)
Q Consensus 191 ~~~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg~--~~~~ 265 (452)
..+...+.+.+.+.. ....+|||+|||+|.++..++.. .|+++|+++..+..+.. .+...+. ++.+
T Consensus 107 ~te~lv~~~l~~~~~--------~~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~-n~~~~~l~~~v~~ 177 (284)
T 1nv8_A 107 ETEELVELALELIRK--------YGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARK-NAERHGVSDRFFV 177 (284)
T ss_dssp THHHHHHHHHHHHHH--------HTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHH-HHHHTTCTTSEEE
T ss_pred hHHHHHHHHHHHhcc--------cCCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHH-HHHHcCCCCceEE
Confidence 345556655555531 12348999999999999999864 56677766665544442 2333344 3888
Q ss_pred EEecCCCCCCCCCCc---eEEEecccccc----------ccc--------cHHHHHHHHH-HhcCCCcEEEEEeC
Q 012961 266 GVLGTKRLPYPSRSF---ELAHCSRCRID----------WLQ--------RDGILLLELD-RLLRPGGYFVYSSP 318 (452)
Q Consensus 266 ~~~d~~~lp~~d~sF---DlVv~s~~~l~----------~~~--------d~~~~L~ei~-RvLkPGG~lvi~~p 318 (452)
..+|.... ++ ++| |+|+++.-.+. |.+ +...+++++. +.|+|||++++...
T Consensus 178 ~~~D~~~~-~~-~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~ 250 (284)
T 1nv8_A 178 RKGEFLEP-FK-EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIG 250 (284)
T ss_dssp EESSTTGG-GG-GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECC
T ss_pred EECcchhh-cc-cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEEC
Confidence 88887652 33 478 99998621110 111 1126899999 99999999999654
No 232
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.71 E-value=7.6e-08 Score=98.57 Aligned_cols=126 Identities=15% Similarity=0.014 Sum_probs=81.8
Q ss_pred CCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCC-CCCCCCceEEEecccccc-
Q 012961 216 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRL-PYPSRSFELAHCSRCRID- 291 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~l-p~~d~sFDlVv~s~~~l~- 291 (452)
+.+|||+|||+|.++..++.. .|+++|+++.++..+.. .++..+....+..+|+.++ +...+.||+|++..-.+.
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~ga~V~avDis~~al~~a~~-n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f~~ 293 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARKGAYALAVDKDLEALGVLDQ-AALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTLVK 293 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHH-HHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCCCS
T ss_pred CCeEEEcccchhHHHHHHHHcCCeEEEEECCHHHHHHHHH-HHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcCCC
Confidence 458999999999999999863 47777777776655543 3333456666777886553 221234999997532211
Q ss_pred -------ccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEE
Q 012961 292 -------WLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKI 345 (452)
Q Consensus 292 -------~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~ 345 (452)
...+...++..+.++|+|||++++++...... .....+.+.+.+.+.|...
T Consensus 294 ~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~---~~~f~~~v~~a~~~~g~~~ 351 (393)
T 4dmg_A 294 RPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLR---LEDLLEVARRAAADLGRRL 351 (393)
T ss_dssp SGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSC---HHHHHHHHHHHHHHHTCCE
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCC---HHHHHHHHHHHHHHhCCeE
Confidence 12334568999999999999999776443211 1122345666777777654
No 233
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.69 E-value=4.6e-08 Score=102.68 Aligned_cols=122 Identities=18% Similarity=0.145 Sum_probs=79.4
Q ss_pred CCCEEEEECCCCchHHHHHhh-----CCCccccCChhhhhHHHHHHHHHcCC-CeEEEEecCCCCCC-CCCCceEEEec-
Q 012961 215 NIRNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGI-PSTLGVLGTKRLPY-PSRSFELAHCS- 286 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~-----~~v~~vdis~~dis~~~~~~A~~rg~-~~~~~~~d~~~lp~-~d~sFDlVv~s- 286 (452)
++.+|||+|||+|..+..|++ ..|+++|+++..+.....+ ++..+. ++.+...|...++. .+++||+|++.
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n-~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~ 195 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHAN-ISRCGISNVALTHFDGRVFGAAVPEMFDAILLDA 195 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHH-HHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEEC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHH-HHHcCCCcEEEEeCCHHHhhhhccccCCEEEECC
Confidence 345899999999999999886 2477777776665444422 233344 57888888877653 45789999972
Q ss_pred ---c-cccccccc----------------HHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCC
Q 012961 287 ---R-CRIDWLQR----------------DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMC 342 (452)
Q Consensus 287 ---~-~~l~~~~d----------------~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~G 342 (452)
. .++...++ ...+|.++.++|||||+|++++-.......+ +.+..++++.+
T Consensus 196 PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~~~Ene-----~vv~~~l~~~~ 266 (479)
T 2frx_A 196 PCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEENE-----AVCLWLKETYP 266 (479)
T ss_dssp CCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCSSTTTH-----HHHHHHHHHST
T ss_pred CcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCCcccCH-----HHHHHHHHHCC
Confidence 1 12211111 2358999999999999999987544322221 23455566554
No 234
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.69 E-value=1e-08 Score=95.91 Aligned_cols=98 Identities=13% Similarity=0.099 Sum_probs=68.9
Q ss_pred CCEEEEECCCCchHHHHHhhC-----CCccccCChhhhhHHHHHHHHHcCC--CeEEEEecCCCC-C-CCC----CCceE
Q 012961 216 IRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRL-P-YPS----RSFEL 282 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~-----~v~~vdis~~dis~~~~~~A~~rg~--~~~~~~~d~~~l-p-~~d----~sFDl 282 (452)
..+|||||||+|.++..++.. .++++|+++..+..+.. .....+. ++.+..+|+.+. + +++ ++||+
T Consensus 70 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~-~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~ 148 (229)
T 2avd_A 70 AKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRP-LWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDV 148 (229)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHH-HHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEE
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH-HHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccE
Confidence 358999999999999999863 46677776665544432 2223343 578888876432 1 111 68999
Q ss_pred EEeccccccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012961 283 AHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSP 318 (452)
Q Consensus 283 Vv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p 318 (452)
|++... ..+...+++++.++|+|||++++...
T Consensus 149 v~~d~~----~~~~~~~l~~~~~~L~pgG~lv~~~~ 180 (229)
T 2avd_A 149 AVVDAD----KENCSAYYERCLQLLRPGGILAVLRV 180 (229)
T ss_dssp EEECSC----STTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred EEECCC----HHHHHHHHHHHHHHcCCCeEEEEECC
Confidence 997542 33446799999999999999998653
No 235
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.69 E-value=2.5e-08 Score=104.13 Aligned_cols=128 Identities=20% Similarity=0.183 Sum_probs=83.9
Q ss_pred CCCEEEEECCCCchHHHHHhhC-----CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC-CCCCCceEEEe---
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP-YPSRSFELAHC--- 285 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~-----~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp-~~d~sFDlVv~--- 285 (452)
++.+|||+|||+|..+..|++. .|+++|+++..+..+. +.+...+..+.+...|+..++ +.+++||+|++
T Consensus 101 ~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~-~n~~r~G~~v~~~~~Da~~l~~~~~~~FD~Il~D~P 179 (464)
T 3m6w_A 101 PGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLL-ENVERWGAPLAVTQAPPRALAEAFGTYFHRVLLDAP 179 (464)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHH-HHHHHHCCCCEEECSCHHHHHHHHCSCEEEEEEECC
T ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-HHHHHcCCeEEEEECCHHHhhhhccccCCEEEECCC
Confidence 3458999999999999999852 4777777776664444 333334555778888876665 23578999995
Q ss_pred -cc-cccccccc----------------HHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhC-CCEEE
Q 012961 286 -SR-CRIDWLQR----------------DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSM-CWKIV 346 (452)
Q Consensus 286 -s~-~~l~~~~d----------------~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~-Gf~~v 346 (452)
+. ..+...++ ...+|.++.++|||||+|++++-.... .++ -+.+..++++. +|+++
T Consensus 180 cSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~~--eEn---e~vv~~~l~~~~~~~l~ 254 (464)
T 3m6w_A 180 CSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFAP--EEN---EGVVAHFLKAHPEFRLE 254 (464)
T ss_dssp CCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCCG--GGT---HHHHHHHHHHCTTEEEE
T ss_pred cCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCch--hcC---HHHHHHHHHHCCCcEEE
Confidence 21 11211111 156899999999999999998754321 111 23456666666 67766
Q ss_pred EE
Q 012961 347 SK 348 (452)
Q Consensus 347 ~~ 348 (452)
..
T Consensus 255 ~~ 256 (464)
T 3m6w_A 255 DA 256 (464)
T ss_dssp CC
T ss_pred ec
Confidence 43
No 236
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.68 E-value=7.2e-08 Score=98.58 Aligned_cols=126 Identities=10% Similarity=0.038 Sum_probs=84.7
Q ss_pred CCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcCC---CeEEEEecCCCCCC----CCCCceEEEe
Q 012961 216 IRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI---PSTLGVLGTKRLPY----PSRSFELAHC 285 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg~---~~~~~~~d~~~lp~----~d~sFDlVv~ 285 (452)
..+|||+|||+|.++..++.. .|+++|+++..+..+. +.+...+. ++.+..+|+.++.. .+++||+|++
T Consensus 221 ~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~-~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~ 299 (396)
T 3c0k_A 221 NKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIAR-QNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVM 299 (396)
T ss_dssp TCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHH-HHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHH-HHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEEE
Confidence 348999999999999999874 5777877776665544 33334455 67888888765421 1468999998
Q ss_pred ccc--------cccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEE
Q 012961 286 SRC--------RIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKI 345 (452)
Q Consensus 286 s~~--------~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~ 345 (452)
..- ..+.......++.++.++|+|||+++++....... .+ ...+.+.+.+.+.|+..
T Consensus 300 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-~~--~~~~~i~~~~~~~g~~~ 364 (396)
T 3c0k_A 300 DPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMT-SD--LFQKIIADAAIDAGRDV 364 (396)
T ss_dssp CCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCC-HH--HHHHHHHHHHHHHTCCE
T ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCC-HH--HHHHHHHHHHHHcCCeE
Confidence 531 11222455678999999999999999987543221 11 22344556777788543
No 237
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.68 E-value=1.9e-08 Score=95.52 Aligned_cols=97 Identities=12% Similarity=0.101 Sum_probs=68.6
Q ss_pred CCEEEEECCCCchHHHHHhhC-----CCccccCChhhhhHHHHHHHHHcCC--CeEEEEecCCCC-C-C-----CCCCce
Q 012961 216 IRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRL-P-Y-----PSRSFE 281 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~-----~v~~vdis~~dis~~~~~~A~~rg~--~~~~~~~d~~~l-p-~-----~d~sFD 281 (452)
+.+|||||||+|..+..+++. .++++|+++..+..+. +...+.+. ++.+..+|+.+. + + ++++||
T Consensus 71 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~-~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD 149 (237)
T 3c3y_A 71 AKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGL-PFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYD 149 (237)
T ss_dssp CCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHH-HHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEE
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-HHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcC
Confidence 358999999999999998752 5667776665554443 22233344 478888886543 2 2 247899
Q ss_pred EEEeccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 282 LAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 282 lVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
+|++.. ...+...+++++.++|+|||++++..
T Consensus 150 ~I~~d~----~~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 150 FGFVDA----DKPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp EEEECS----CGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEECC----chHHHHHHHHHHHHhcCCCeEEEEec
Confidence 999653 23455779999999999999999865
No 238
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.68 E-value=7e-08 Score=105.88 Aligned_cols=120 Identities=17% Similarity=0.130 Sum_probs=84.0
Q ss_pred CCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcCC---CeEEEEecCCC-CCCCCCCceEEEeccc
Q 012961 216 IRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI---PSTLGVLGTKR-LPYPSRSFELAHCSRC 288 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg~---~~~~~~~d~~~-lp~~d~sFDlVv~s~~ 288 (452)
+.+|||+|||+|.++..++.. .|+++|+++..+..+..+.+ ..+. ++.+..+|+.. ++...++||+|++..-
T Consensus 540 g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~-~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP 618 (703)
T 3v97_A 540 GKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLR-LNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPP 618 (703)
T ss_dssp TCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHH-HTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECCC
T ss_pred CCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHH-HcCCCccceEEEecCHHHHHHhcCCCccEEEECCc
Confidence 348999999999999998863 47788887777765553333 3343 48889998765 3444578999998532
Q ss_pred ----------cccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEE
Q 012961 289 ----------RIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKI 345 (452)
Q Consensus 289 ----------~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~ 345 (452)
+++...+...++.++.++|+|||+|+++......... .+.+++.||+.
T Consensus 619 ~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~~~~---------~~~l~~~g~~~ 676 (703)
T 3v97_A 619 TFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMD---------LDGLAKLGLKA 676 (703)
T ss_dssp SBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTCCCC---------HHHHHHTTEEE
T ss_pred cccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCcccccC---------HHHHHHcCCce
Confidence 2233445567899999999999999998765321111 35566788764
No 239
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.67 E-value=2.6e-08 Score=101.45 Aligned_cols=125 Identities=14% Similarity=0.092 Sum_probs=83.3
Q ss_pred CEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHcCC-CeEEEEecCCCCCC----CCCCceEEEecccc
Q 012961 217 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGI-PSTLGVLGTKRLPY----PSRSFELAHCSRCR 289 (452)
Q Consensus 217 ~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg~-~~~~~~~d~~~lp~----~d~sFDlVv~s~~~ 289 (452)
.+|||+|||+|.++..++.. .|+++|+++..+..+..+ +...+. ++.+..+|+..+.. .+++||+|++..-.
T Consensus 211 ~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~~~a~~n-~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dpP~ 289 (382)
T 1wxx_A 211 ERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEEN-ARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDPPA 289 (382)
T ss_dssp EEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHHH-HHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred CeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHHHHHHHH-HHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECCCC
Confidence 48999999999999999863 677787777666555433 333343 47888888765421 14689999984311
Q ss_pred --------ccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEE
Q 012961 290 --------IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKI 345 (452)
Q Consensus 290 --------l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~ 345 (452)
.........++.++.++|+|||+++++....... . ....+.+.+.+.+.|...
T Consensus 290 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-~--~~~~~~i~~~~~~~g~~~ 350 (382)
T 1wxx_A 290 FAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMT-E--PLFYAMVAEAAQDAHRLL 350 (382)
T ss_dssp SCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSC-H--HHHHHHHHHHHHHTTCCE
T ss_pred CCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCC-H--HHHHHHHHHHHHHcCCeE
Confidence 1122344669999999999999999987654221 1 112344556777777533
No 240
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.67 E-value=5.5e-08 Score=92.82 Aligned_cols=132 Identities=16% Similarity=0.082 Sum_probs=83.5
Q ss_pred CCCEEEEECCCCchHHHHHhh-CCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEecccccccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLS-HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL 293 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~-~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~ 293 (452)
.+.+|||||||.|.++..++. ..++++|+++.++.-.. +.+...+.+..+.+.|....+.+ ++||+|++.- ++|++
T Consensus 105 ~p~~VLDlGCG~gpLal~~~~~~~y~a~DId~~~i~~ar-~~~~~~g~~~~~~v~D~~~~~~~-~~~DvvLllk-~lh~L 181 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYERGIASVWGCDIHQGLGDVIT-PFAREKDWDFTFALQDVLCAPPA-EAGDLALIFK-LLPLL 181 (253)
T ss_dssp CCSEEEEETCTTTHHHHHHTTCSEEEEEESBHHHHHHHH-HHHHHTTCEEEEEECCTTTSCCC-CBCSEEEEES-CHHHH
T ss_pred CCCeEEEecCCccHHHHHhccCCeEEEEeCCHHHHHHHH-HHHHhcCCCceEEEeecccCCCC-CCcchHHHHH-HHHHh
Confidence 456999999999999998773 46777777766664443 23334477888999998888776 4899999766 67777
Q ss_pred ccHH-HHHHHHHHhcCCCcEEEEEeC-CCCCCChhhHHHH-HHHHHHHHhCCCEEEEEE
Q 012961 294 QRDG-ILLLELDRLLRPGGYFVYSSP-EAYAHDPENRRIW-NAMYDLLKSMCWKIVSKK 349 (452)
Q Consensus 294 ~d~~-~~L~ei~RvLkPGG~lvi~~p-~~~~~~~~~~~~~-~~l~~ll~~~Gf~~v~~~ 349 (452)
++.+ ..+.++.+.|+++|.++-... ..-.+.+.....+ ..++..+.+..|.+-+.+
T Consensus 182 E~q~~~~~~~ll~aL~~~~vvVsfPtksl~Gr~~gm~~~Y~~~~e~~~~~~~~~~~~~~ 240 (253)
T 3frh_A 182 EREQAGSAMALLQSLNTPRMAVSFPTRSLGGRGKGMEANYAAWFEGGLPAEFEIEDKKT 240 (253)
T ss_dssp HHHSTTHHHHHHHHCBCSEEEEEEECC-----------CHHHHHHHHSCTTEEEEEEEE
T ss_pred hhhchhhHHHHHHHhcCCCEEEEcChHHhcCCCcchhhHHHHHHHHHhhccchhhhhee
Confidence 5542 244488899999977764331 1111222222223 355666666555544433
No 241
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.63 E-value=5.9e-07 Score=92.98 Aligned_cols=135 Identities=17% Similarity=0.160 Sum_probs=85.5
Q ss_pred HHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHcCC-CeEEEEec
Q 012961 193 DKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGI-PSTLGVLG 269 (452)
Q Consensus 193 ~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg~-~~~~~~~d 269 (452)
+...+.+.+.+.. ....+|||+|||+|.++..|+.. .|+++|+++.++..+.. .+...+. ++.+..+|
T Consensus 272 e~l~~~~~~~l~~--------~~~~~VLDlgcG~G~~~~~la~~~~~V~gvD~s~~al~~A~~-n~~~~~~~~v~f~~~d 342 (433)
T 1uwv_A 272 QKMVARALEWLDV--------QPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQ-NARLNGLQNVTFYHEN 342 (433)
T ss_dssp HHHHHHHHHHHTC--------CTTCEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHHHHH-HHHHTTCCSEEEEECC
T ss_pred HHHHHHHHHhhcC--------CCCCEEEECCCCCCHHHHHHHhhCCEEEEEeCCHHHHHHHHH-HHHHcCCCceEEEECC
Confidence 4445555555542 23458999999999999999974 57777777766655543 3333443 68899999
Q ss_pred CCC----CCCCCCCceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEE
Q 012961 270 TKR----LPYPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKI 345 (452)
Q Consensus 270 ~~~----lp~~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~ 345 (452)
+.. +++++++||+|++..- +..- ..+++.+. .++|++.++++..+. .+..-...+.+.||++
T Consensus 343 ~~~~l~~~~~~~~~fD~Vv~dPP---r~g~-~~~~~~l~-~~~p~~ivyvsc~p~---------tlard~~~l~~~Gy~~ 408 (433)
T 1uwv_A 343 LEEDVTKQPWAKNGFDKVLLDPA---RAGA-AGVMQQII-KLEPIRIVYVSCNPA---------TLARDSEALLKAGYTI 408 (433)
T ss_dssp TTSCCSSSGGGTTCCSEEEECCC---TTCC-HHHHHHHH-HHCCSEEEEEESCHH---------HHHHHHHHHHHTTCEE
T ss_pred HHHHhhhhhhhcCCCCEEEECCC---CccH-HHHHHHHH-hcCCCeEEEEECChH---------HHHhhHHHHHHCCcEE
Confidence 766 3456678999997532 1111 23555554 378999988865321 1222234456679998
Q ss_pred EEEEe
Q 012961 346 VSKKD 350 (452)
Q Consensus 346 v~~~~ 350 (452)
.....
T Consensus 409 ~~~~~ 413 (433)
T 1uwv_A 409 ARLAM 413 (433)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 76543
No 242
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.63 E-value=8.4e-08 Score=94.30 Aligned_cols=112 Identities=13% Similarity=0.029 Sum_probs=76.2
Q ss_pred CCCEEEEECC------CCch-HHHHHhh--CCCccccCChhhhhHHHHHHHHHcCCCeEE-EEecCCCCCCCCCCceEEE
Q 012961 215 NIRNVLDVGC------GVAS-FGAYLLS--HDIIAMSLAPNDVHENQIQFALERGIPSTL-GVLGTKRLPYPSRSFELAH 284 (452)
Q Consensus 215 ~~~~VLDIGC------G~G~-~~~~La~--~~v~~vdis~~dis~~~~~~A~~rg~~~~~-~~~d~~~lp~~d~sFDlVv 284 (452)
+..+|||+|| |+|. ++..+.. ..|+++|+++. + .++.+ .++|+..++++ ++||+|+
T Consensus 63 ~g~~VLDLGcGsg~~~GpGs~~~a~~~~~~~~V~gvDis~~-v------------~~v~~~i~gD~~~~~~~-~~fD~Vv 128 (290)
T 2xyq_A 63 YNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDF-V------------SDADSTLIGDCATVHTA-NKWDLII 128 (290)
T ss_dssp TTCEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCC-B------------CSSSEEEESCGGGCCCS-SCEEEEE
T ss_pred CCCEEEEeCCCCCCCCCcHHHHHHHHcCCCCEEEEEECCCC-C------------CCCEEEEECccccCCcc-CcccEEE
Confidence 3458999999 4475 1222222 35788888875 1 25677 89999888765 6899999
Q ss_pred eccccccc-----------cccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEEE
Q 012961 285 CSRCRIDW-----------LQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 349 (452)
Q Consensus 285 ~s~~~l~~-----------~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~ 349 (452)
|.. ..++ ......+++++.|+|||||.|++....... ..++..++++.||..+...
T Consensus 129 sn~-~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~--------~~~l~~~l~~~GF~~v~~~ 195 (290)
T 2xyq_A 129 SDM-YDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW--------NADLYKLMGHFSWWTAFVT 195 (290)
T ss_dssp ECC-CCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC--------CHHHHHHHTTEEEEEEEEE
T ss_pred EcC-CccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCC--------HHHHHHHHHHcCCcEEEEE
Confidence 853 2221 111246899999999999999997643321 2367788888899765543
No 243
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.62 E-value=5e-08 Score=101.73 Aligned_cols=128 Identities=13% Similarity=0.037 Sum_probs=84.1
Q ss_pred CCCEEEEECCCCchHHHHHhhC-----CCccccCChhhhhHHHHHHHHHcCC-CeEEEEecCCCCC-CCCCCceEEEecc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALERGI-PSTLGVLGTKRLP-YPSRSFELAHCSR 287 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~-----~v~~vdis~~dis~~~~~~A~~rg~-~~~~~~~d~~~lp-~~d~sFDlVv~s~ 287 (452)
++.+|||+|||+|..+..|++. .|+++|+++..+..... .+...+. ++.+...|...++ ..+++||+|++..
T Consensus 105 ~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~-n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~Da 183 (456)
T 3m4x_A 105 PGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSE-NIERWGVSNAIVTNHAPAELVPHFSGFFDRIVVDA 183 (456)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHH-HHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEEEC
T ss_pred CCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHH-HHHHcCCCceEEEeCCHHHhhhhccccCCEEEECC
Confidence 3458999999999999888752 57788877766654443 3333344 4677777876654 2347899999632
Q ss_pred -----cccccccc----------------HHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEE
Q 012961 288 -----CRIDWLQR----------------DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIV 346 (452)
Q Consensus 288 -----~~l~~~~d----------------~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v 346 (452)
.++...++ ...+|.++.++|||||+|++++-.... .+ .-+.+..++++.+|+++
T Consensus 184 PCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~~--eE---ne~vv~~~l~~~~~~l~ 258 (456)
T 3m4x_A 184 PCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFAP--EE---NEEIISWLVENYPVTIE 258 (456)
T ss_dssp CCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCG--GG---THHHHHHHHHHSSEEEE
T ss_pred CCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeeccc--cc---CHHHHHHHHHhCCCEEE
Confidence 01111111 125899999999999999998754321 11 12456778888887766
Q ss_pred EE
Q 012961 347 SK 348 (452)
Q Consensus 347 ~~ 348 (452)
..
T Consensus 259 ~~ 260 (456)
T 3m4x_A 259 EI 260 (456)
T ss_dssp CC
T ss_pred ec
Confidence 43
No 244
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.62 E-value=8e-08 Score=94.01 Aligned_cols=109 Identities=19% Similarity=0.169 Sum_probs=69.4
Q ss_pred HHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHcC--CCeEEEEec
Q 012961 194 KYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERG--IPSTLGVLG 269 (452)
Q Consensus 194 ~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg--~~~~~~~~d 269 (452)
...+.+.+.+.. .+..+|||||||+|.++..|++. .|+++|+++.++..+... ....+ .++.+..+|
T Consensus 15 ~i~~~i~~~~~~--------~~~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~~-~~~~~~~~~v~~~~~D 85 (285)
T 1zq9_A 15 LIINSIIDKAAL--------RPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKR-VQGTPVASKLQVLVGD 85 (285)
T ss_dssp HHHHHHHHHTCC--------CTTCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHH-HTTSTTGGGEEEEESC
T ss_pred HHHHHHHHhcCC--------CCCCEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHHH-HHhcCCCCceEEEEcc
Confidence 455556665543 23458999999999999999873 566676665554333211 11112 357889999
Q ss_pred CCCCCCCCCCceEEEeccccccccccHH-HHH--------------HHH--HHhcCCCcEEE
Q 012961 270 TKRLPYPSRSFELAHCSRCRIDWLQRDG-ILL--------------LEL--DRLLRPGGYFV 314 (452)
Q Consensus 270 ~~~lp~~d~sFDlVv~s~~~l~~~~d~~-~~L--------------~ei--~RvLkPGG~lv 314 (452)
+..++++ +||+|+++. .+++..+.- .++ +|+ .++|+|||.++
T Consensus 86 ~~~~~~~--~fD~vv~nl-py~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 86 VLKTDLP--FFDTCVANL-PYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp TTTSCCC--CCSEEEEEC-CGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred eecccch--hhcEEEEec-CcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 9887765 799999864 344433221 122 334 36999999874
No 245
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.62 E-value=3.2e-08 Score=101.12 Aligned_cols=126 Identities=13% Similarity=0.016 Sum_probs=84.5
Q ss_pred CCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcCC--CeEEEEecCCCCCC----CCCCceEEEec
Q 012961 216 IRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPY----PSRSFELAHCS 286 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg~--~~~~~~~d~~~lp~----~d~sFDlVv~s 286 (452)
..+|||+|||+|.++..++.. .|+++|+++..+..+.. .+...+. ++.+..+|+.++.. .+++||+|++.
T Consensus 218 ~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~-n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~d 296 (396)
T 2as0_A 218 GDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKE-NAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLD 296 (396)
T ss_dssp TCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHH-HHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-HHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEEC
Confidence 458999999999999999864 57788877776655543 3333454 57888888765421 25689999984
Q ss_pred ccc--------ccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEE
Q 012961 287 RCR--------IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKI 345 (452)
Q Consensus 287 ~~~--------l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~ 345 (452)
.-. .++..+...++.++.++|+|||.+++++...... .+ ...+.+.+.+...|...
T Consensus 297 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~-~~--~~~~~v~~~~~~~~~~~ 360 (396)
T 2as0_A 297 PPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQHVD-LQ--MFKDMIIAAGAKAGKFL 360 (396)
T ss_dssp CCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTTSC-HH--HHHHHHHHHHHHTTEEE
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCCCC-HH--HHHHHHHHHHHHcCCeE
Confidence 311 1222445678999999999999999887543211 11 12234556677777654
No 246
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.60 E-value=9.8e-08 Score=95.63 Aligned_cols=122 Identities=13% Similarity=0.172 Sum_probs=81.4
Q ss_pred CCCEEEEECCCCchHHHHHhh---------CCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEe
Q 012961 215 NIRNVLDVGCGVASFGAYLLS---------HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHC 285 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~---------~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~ 285 (452)
...+|||+|||+|.++..+++ ..++|+|+++..+..+..... ..+.++.+..+|+... .+.+.||+|++
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~-~~g~~~~i~~~D~l~~-~~~~~fD~Ii~ 207 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGAD-LQRQKMTLLHQDGLAN-LLVDPVDVVIS 207 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHH-HHTCCCEEEESCTTSC-CCCCCEEEEEE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHH-hCCCCceEEECCCCCc-cccCCccEEEE
Confidence 345899999999999988864 235666666555544433222 2356788888887553 34578999998
Q ss_pred ccccccccccH------------------HHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCC
Q 012961 286 SRCRIDWLQRD------------------GILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCW 343 (452)
Q Consensus 286 s~~~l~~~~d~------------------~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf 343 (452)
+.. +++.... ..++.++.+.|+|||+++++.|..+..... ...+.+.+.+.|+
T Consensus 208 NPP-fg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~----~~~ir~~l~~~~~ 278 (344)
T 2f8l_A 208 DLP-VGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSD----FAKVDKFIKKNGH 278 (344)
T ss_dssp ECC-CSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTT----HHHHHHHHHHHEE
T ss_pred CCC-CCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCch----HHHHHHHHHhCCe
Confidence 753 3332211 258999999999999999998765432222 2566666666666
No 247
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.60 E-value=1.4e-07 Score=96.43 Aligned_cols=130 Identities=14% Similarity=0.134 Sum_probs=87.0
Q ss_pred HHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhh-----CCCccccCChhhhhHHHHHHHHHcCCCeEEEE
Q 012961 193 DKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGIPSTLGV 267 (452)
Q Consensus 193 ~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~-----~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~ 267 (452)
....+.+.+.+.. ....+|||+|||+|.++..+++ ..++|+|+++..+..+ .++.+..
T Consensus 25 ~~l~~~~~~~~~~--------~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---------~~~~~~~ 87 (421)
T 2ih2_A 25 PEVVDFMVSLAEA--------PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---------PWAEGIL 87 (421)
T ss_dssp HHHHHHHHHHCCC--------CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---------TTEEEEE
T ss_pred HHHHHHHHHhhcc--------CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---------CCCcEEe
Confidence 3455556665542 1234899999999999999885 2577787777665332 4678888
Q ss_pred ecCCCCCCCCCCceEEEeccccc--cc-------c-cc------------------HHHHHHHHHHhcCCCcEEEEEeCC
Q 012961 268 LGTKRLPYPSRSFELAHCSRCRI--DW-------L-QR------------------DGILLLELDRLLRPGGYFVYSSPE 319 (452)
Q Consensus 268 ~d~~~lp~~d~sFDlVv~s~~~l--~~-------~-~d------------------~~~~L~ei~RvLkPGG~lvi~~p~ 319 (452)
+|....+. .+.||+|+++--.. .. . .+ ...+++.+.++|+|||++++..|.
T Consensus 88 ~D~~~~~~-~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 88 ADFLLWEP-GEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp SCGGGCCC-SSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred CChhhcCc-cCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEECh
Confidence 88877653 46899999852111 00 1 11 125789999999999999999987
Q ss_pred CCCCChhhHHHHHHHHHHHHhCCCE
Q 012961 320 AYAHDPENRRIWNAMYDLLKSMCWK 344 (452)
Q Consensus 320 ~~~~~~~~~~~~~~l~~ll~~~Gf~ 344 (452)
.+.... ..+.+.+.+.+.|+.
T Consensus 167 ~~l~~~----~~~~lr~~l~~~~~~ 187 (421)
T 2ih2_A 167 TWLVLE----DFALLREFLAREGKT 187 (421)
T ss_dssp GGGTCG----GGHHHHHHHHHHSEE
T ss_pred HHhcCc----cHHHHHHHHHhcCCe
Confidence 643332 235677777777773
No 248
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.55 E-value=2.5e-07 Score=91.09 Aligned_cols=87 Identities=15% Similarity=0.239 Sum_probs=55.5
Q ss_pred HHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHcC-CCeEEEEecC
Q 012961 194 KYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERG-IPSTLGVLGT 270 (452)
Q Consensus 194 ~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg-~~~~~~~~d~ 270 (452)
...+.+.+.+.. .+..+|||||||+|.++..|++. .|+++|+++.++..+..... ..+ .++.+..+|+
T Consensus 29 ~i~~~i~~~~~~--------~~~~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~~~~~~a~~~~~-~~~~~~v~~~~~D~ 99 (299)
T 2h1r_A 29 GILDKIIYAAKI--------KSSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRCL-YEGYNNLEVYEGDA 99 (299)
T ss_dssp HHHHHHHHHHCC--------CTTCEEEEECCTTSTTHHHHTTTSSEEEEECSCHHHHHHHHHHHH-HTTCCCEEC----C
T ss_pred HHHHHHHHhcCC--------CCcCEEEEEcCcCcHHHHHHHhcCCEEEEEECCHHHHHHHHHHHH-HcCCCceEEEECch
Confidence 345556565543 23458999999999999999874 56777776666544442222 223 4688888998
Q ss_pred CCCCCCCCCceEEEeccccccc
Q 012961 271 KRLPYPSRSFELAHCSRCRIDW 292 (452)
Q Consensus 271 ~~lp~~d~sFDlVv~s~~~l~~ 292 (452)
..++++ +||+|+++. ..++
T Consensus 100 ~~~~~~--~~D~Vv~n~-py~~ 118 (299)
T 2h1r_A 100 IKTVFP--KFDVCTANI-PYKI 118 (299)
T ss_dssp CSSCCC--CCSEEEEEC-CGGG
T ss_pred hhCCcc--cCCEEEEcC-Cccc
Confidence 887764 799999865 3444
No 249
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.40 E-value=6.6e-07 Score=92.88 Aligned_cols=117 Identities=15% Similarity=0.086 Sum_probs=77.3
Q ss_pred HHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhh-----------------CCCccccCChhhhhHHHHHHH
Q 012961 194 KYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLS-----------------HDIIAMSLAPNDVHENQIQFA 256 (452)
Q Consensus 194 ~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~-----------------~~v~~vdis~~dis~~~~~~A 256 (452)
...+.+.+++.. ....+|||.|||+|.++..+++ ..++|+|+++..+..+..+..
T Consensus 158 ~v~~~mv~~l~~--------~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~ 229 (445)
T 2okc_A 158 PLIQAMVDCINP--------QMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLY 229 (445)
T ss_dssp HHHHHHHHHHCC--------CTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCC--------CCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHH
Confidence 355566666642 2345799999999999887764 346667666655544433222
Q ss_pred HHcCC---CeEEEEecCCCCCCCCCCceEEEecccccc--cccc--------------HHHHHHHHHHhcCCCcEEEEEe
Q 012961 257 LERGI---PSTLGVLGTKRLPYPSRSFELAHCSRCRID--WLQR--------------DGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 257 ~~rg~---~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~--~~~d--------------~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
..+. ...+..+|+...+.. ..||+|+++.-... +... ...+++.+.++|+|||+++++.
T Consensus 230 -l~g~~~~~~~i~~gD~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~ 307 (445)
T 2okc_A 230 -LHGIGTDRSPIVCEDSLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVL 307 (445)
T ss_dssp -HTTCCSSCCSEEECCTTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -HhCCCcCCCCEeeCCCCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEE
Confidence 2344 567888888776654 48999998642111 1110 1368999999999999999988
Q ss_pred CCC
Q 012961 318 PEA 320 (452)
Q Consensus 318 p~~ 320 (452)
|..
T Consensus 308 p~~ 310 (445)
T 2okc_A 308 PDN 310 (445)
T ss_dssp EHH
T ss_pred CCc
Confidence 754
No 250
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.38 E-value=1.1e-06 Score=90.78 Aligned_cols=95 Identities=16% Similarity=0.214 Sum_probs=67.2
Q ss_pred CCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEecccccccc
Q 012961 216 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL 293 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~ 293 (452)
..+|||+|||+|.++..|++. .|+++|+++.++..+.. .+...+..+.+..+|+.++.. .+||+|++... ..
T Consensus 291 ~~~VLDlgcG~G~~sl~la~~~~~V~gvD~s~~ai~~A~~-n~~~ngl~v~~~~~d~~~~~~--~~fD~Vv~dPP---r~ 364 (425)
T 2jjq_A 291 GEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARR-NVEINNVDAEFEVASDREVSV--KGFDTVIVDPP---RA 364 (425)
T ss_dssp SSEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHH-HHHHHTCCEEEEECCTTTCCC--TTCSEEEECCC---TT
T ss_pred CCEEEEeeccchHHHHHHHHcCCEEEEEECCHHHHHHHHH-HHHHcCCcEEEEECChHHcCc--cCCCEEEEcCC---cc
Confidence 458999999999999999874 57788877777655543 333345558899999887743 28999997542 11
Q ss_pred ccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 294 QRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 294 ~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
.....+++.+. .|+|||.++++.
T Consensus 365 g~~~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 365 GLHPRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp CSCHHHHHHHH-HHCCSEEEEEES
T ss_pred chHHHHHHHHH-hcCCCcEEEEEC
Confidence 11234555554 599999999976
No 251
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.38 E-value=1.1e-06 Score=89.19 Aligned_cols=103 Identities=18% Similarity=0.268 Sum_probs=64.7
Q ss_pred CCCEEEEECCCCchHHHHHhhC-------------------CCccccCChhhhhHHHHHHHHH----------c--CCCe
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH-------------------DIIAMSLAPNDVHENQIQFALE----------R--GIPS 263 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~-------------------~v~~vdis~~dis~~~~~~A~~----------r--g~~~ 263 (452)
..-+|+|+|||+|..+..+... .|..-|+...|...-....... . +.+.
T Consensus 52 ~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~ 131 (374)
T 3b5i_A 52 PPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRS 131 (374)
T ss_dssp CCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBC
T ss_pred CceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCc
Confidence 3468999999999988877431 2233455555543322111110 0 0011
Q ss_pred EE--EEe-cCCCCCCCCCCceEEEeccccccccc--------------------------------------cHHHHHHH
Q 012961 264 TL--GVL-GTKRLPYPSRSFELAHCSRCRIDWLQ--------------------------------------RDGILLLE 302 (452)
Q Consensus 264 ~~--~~~-d~~~lp~~d~sFDlVv~s~~~l~~~~--------------------------------------d~~~~L~e 302 (452)
.+ .+. +...-.||+++||+|+++. ++||+. |...+|+.
T Consensus 132 ~f~~gvpgSFy~rlfP~~S~d~v~Ss~-aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ 210 (374)
T 3b5i_A 132 YFVAGVPGSFYRRLFPARTIDFFHSAF-SLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRA 210 (374)
T ss_dssp SEEEEEESCTTSCCSCTTCEEEEEEES-CTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEecChhhhcccCCCcceEEEEecc-eeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 12 222 2333357899999999888 699975 33447889
Q ss_pred HHHhcCCCcEEEEEeC
Q 012961 303 LDRLLRPGGYFVYSSP 318 (452)
Q Consensus 303 i~RvLkPGG~lvi~~p 318 (452)
.++.|+|||+++++..
T Consensus 211 ra~eL~pGG~mvl~~~ 226 (374)
T 3b5i_A 211 RAAEVKRGGAMFLVCL 226 (374)
T ss_dssp HHHHEEEEEEEEEEEE
T ss_pred HHHHhCCCCEEEEEEe
Confidence 9999999999998764
No 252
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.37 E-value=4.2e-09 Score=100.52 Aligned_cols=101 Identities=12% Similarity=0.063 Sum_probs=65.8
Q ss_pred CCCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCC-CCceEEEeccc---
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPS-RSFELAHCSRC--- 288 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d-~sFDlVv~s~~--- 288 (452)
+..+|||||||+|.++..|++. .++++|+++.++..+..... ...++.+..+|+..+++++ ++| .|+++.-
T Consensus 29 ~~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~~~~a~~~~~--~~~~v~~~~~D~~~~~~~~~~~f-~vv~n~Py~~ 105 (245)
T 1yub_A 29 ETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLK--LNTRVTLIHQDILQFQFPNKQRY-KIVGNIPYHL 105 (245)
T ss_dssp SSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSSCTTT--TCSEEEECCSCCTTTTCCCSSEE-EEEEECCSSS
T ss_pred CCCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHHHHHHHHHhc--cCCceEEEECChhhcCcccCCCc-EEEEeCCccc
Confidence 3458999999999999999863 57778777766543321111 1235788889999888774 678 5665420
Q ss_pred -------cccccccHHHHH----HHHHHhcCCCcEEEEEeC
Q 012961 289 -------RIDWLQRDGILL----LELDRLLRPGGYFVYSSP 318 (452)
Q Consensus 289 -------~l~~~~d~~~~L----~ei~RvLkPGG~lvi~~p 318 (452)
.+.+......++ +.+.|+|+|||.+.+..+
T Consensus 106 ~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~~ 146 (245)
T 1yub_A 106 STQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLLH 146 (245)
T ss_dssp CHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHTT
T ss_pred cHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhhe
Confidence 001111222234 679999999999887553
No 253
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.36 E-value=6.6e-07 Score=86.59 Aligned_cols=104 Identities=17% Similarity=0.223 Sum_probs=64.1
Q ss_pred CCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEeccc---
Q 012961 216 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRC--- 288 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~--- 288 (452)
..+|||||||+|.|+.++++. .+.++++. .|+....+.. ...+.++.....+++...++++.||+|+|..+
T Consensus 75 ~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVG-vDl~~~pi~~-~~~g~~ii~~~~~~dv~~l~~~~~DlVlsD~apns 152 (277)
T 3evf_A 75 EGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLG-RDGHEKPMNV-QSLGWNIITFKDKTDIHRLEPVKCDTLLCDIGESS 152 (277)
T ss_dssp CEEEEEETCTTCHHHHHHHTSTTEEEEEEECCC-CTTCCCCCCC-CBTTGGGEEEECSCCTTTSCCCCCSEEEECCCCCC
T ss_pred CCEEEEecCCCCHHHHHHHHhcCCCcceeEEEe-ccCccccccc-CcCCCCeEEEeccceehhcCCCCccEEEecCccCc
Confidence 348999999999999988754 33444444 2221110000 00122444455555556677789999998652
Q ss_pred cccccccHH--HHHHHHHHhcCCC-cEEEEEeCCCC
Q 012961 289 RIDWLQRDG--ILLLELDRLLRPG-GYFVYSSPEAY 321 (452)
Q Consensus 289 ~l~~~~d~~--~~L~ei~RvLkPG-G~lvi~~p~~~ 321 (452)
..++.+... .+|+.+.++|+|| |.|++....+|
T Consensus 153 G~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~py 188 (277)
T 3evf_A 153 SSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAPY 188 (277)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCTT
T ss_pred CchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCCC
Confidence 222433332 2578899999999 99999775443
No 254
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.34 E-value=1.7e-07 Score=89.49 Aligned_cols=66 Identities=12% Similarity=0.200 Sum_probs=46.7
Q ss_pred CCCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHcC---CCeEEEEecCCCCCCCC-CCceEEEec
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERG---IPSTLGVLGTKRLPYPS-RSFELAHCS 286 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg---~~~~~~~~d~~~lp~~d-~sFDlVv~s 286 (452)
+..+|||||||+|.++..|++. .++++|+++ .+++.++++. .++.+..+|+..+++++ ..|+ |+++
T Consensus 30 ~~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~-----~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~~~-vv~n 101 (244)
T 1qam_A 30 EHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDH-----KLCKTTENKLVDHDNFQVLNKDILQFKFPKNQSYK-IFGN 101 (244)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHSSEEEEECSCH-----HHHHHHHHHTTTCCSEEEECCCGGGCCCCSSCCCE-EEEE
T ss_pred CCCEEEEEeCCchHHHHHHHHcCCeEEEEECCH-----HHHHHHHHhhccCCCeEEEEChHHhCCcccCCCeE-EEEe
Confidence 3458999999999999999874 455665554 4445555442 46889999999988874 4564 4444
No 255
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.33 E-value=1.1e-06 Score=86.47 Aligned_cols=84 Identities=7% Similarity=-0.010 Sum_probs=63.4
Q ss_pred HHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhh--CCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCC
Q 012961 194 KYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLS--HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTK 271 (452)
Q Consensus 194 ~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~--~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~ 271 (452)
...+.+.+.+.. .+..+|||||||+|.++..|++ ..|+++|+++.++..+....+ ...++.+..+|+.
T Consensus 37 ~i~~~Iv~~l~~--------~~~~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~li~~a~~~~~--~~~~v~vi~gD~l 106 (295)
T 3gru_A 37 NFVNKAVESANL--------TKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKE--LYNNIEIIWGDAL 106 (295)
T ss_dssp HHHHHHHHHTTC--------CTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHHHHH--HCSSEEEEESCTT
T ss_pred HHHHHHHHhcCC--------CCcCEEEEECCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHHhc--cCCCeEEEECchh
Confidence 455566666553 2345899999999999999987 368888888877755543333 2457899999999
Q ss_pred CCCCCCCCceEEEecc
Q 012961 272 RLPYPSRSFELAHCSR 287 (452)
Q Consensus 272 ~lp~~d~sFDlVv~s~ 287 (452)
.+++++.+||.|+++.
T Consensus 107 ~~~~~~~~fD~Iv~Nl 122 (295)
T 3gru_A 107 KVDLNKLDFNKVVANL 122 (295)
T ss_dssp TSCGGGSCCSEEEEEC
T ss_pred hCCcccCCccEEEEeC
Confidence 9998888899999764
No 256
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.32 E-value=4.2e-07 Score=91.69 Aligned_cols=103 Identities=10% Similarity=0.014 Sum_probs=67.3
Q ss_pred CCCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCC-------------CeEEEEecCCCCCC----CC
Q 012961 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGI-------------PSTLGVLGTKRLPY----PS 277 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~-------------~~~~~~~d~~~lp~----~d 277 (452)
++++|||||||+|.++..++.+.. ..+...|+++.+++.|++... ++.++.+|+..+-- .+
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~--~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~ 265 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKP--KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 265 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCC--SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCEEEEEECChhHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccC
Confidence 567999999999999999887531 233344555666666665421 47888888655321 34
Q ss_pred CCceEEEecccccccc--c---cHHHHHHHH----HHhcCCCcEEEEEeCC
Q 012961 278 RSFELAHCSRCRIDWL--Q---RDGILLLEL----DRLLRPGGYFVYSSPE 319 (452)
Q Consensus 278 ~sFDlVv~s~~~l~~~--~---d~~~~L~ei----~RvLkPGG~lvi~~p~ 319 (452)
++||+|++.....++. + ....+++.+ .++|+|||.+++....
T Consensus 266 ~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s 316 (364)
T 2qfm_A 266 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNC 316 (364)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred CCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCC
Confidence 7899999753211211 1 113466666 8999999999987643
No 257
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.17 E-value=9e-06 Score=83.15 Aligned_cols=118 Identities=14% Similarity=0.105 Sum_probs=74.8
Q ss_pred HHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhh--C---------------------------------
Q 012961 192 ADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLS--H--------------------------------- 236 (452)
Q Consensus 192 ~~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~--~--------------------------------- 236 (452)
.+.....+..+... .....|||.+||+|.++..++. .
T Consensus 186 ~e~lAa~ll~l~~~--------~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~ 257 (393)
T 3k0b_A 186 KETMAAALVLLTSW--------HPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDL 257 (393)
T ss_dssp CHHHHHHHHHHSCC--------CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhCC--------CCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHh
Confidence 34444555544442 2345799999999999877664 2
Q ss_pred -------CCccccCChhhhhHHHHHHHHHcCC--CeEEEEecCCCCCCCCCCceEEEecccccccc---ccHHHHHHHHH
Q 012961 237 -------DIIAMSLAPNDVHENQIQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL---QRDGILLLELD 304 (452)
Q Consensus 237 -------~v~~vdis~~dis~~~~~~A~~rg~--~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~---~d~~~~L~ei~ 304 (452)
.|+++|+++.++..+. +.+...+. .+.+...|+.+++.+ .+||+|+++--..... .+...+.+++.
T Consensus 258 ~~~~~~~~V~GvDid~~al~~Ar-~Na~~~gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg 335 (393)
T 3k0b_A 258 ANYDQPLNIIGGDIDARLIEIAK-QNAVEAGLGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMG 335 (393)
T ss_dssp CCTTCCCCEEEEESCHHHHHHHH-HHHHHTTCTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHH
T ss_pred hcccCCceEEEEECCHHHHHHHH-HHHHHcCCCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHH
Confidence 2667776666665544 23333454 478999999988876 5899999873211111 22344666666
Q ss_pred HhcCC--CcEEEEEeCC
Q 012961 305 RLLRP--GGYFVYSSPE 319 (452)
Q Consensus 305 RvLkP--GG~lvi~~p~ 319 (452)
++||+ ||.+++.++.
T Consensus 336 ~~lk~~~g~~~~iit~~ 352 (393)
T 3k0b_A 336 IVYKRMPTWSVYVLTSY 352 (393)
T ss_dssp HHHHTCTTCEEEEEECC
T ss_pred HHHhcCCCCEEEEEECC
Confidence 77766 8888887653
No 258
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.16 E-value=6.3e-06 Score=84.03 Aligned_cols=103 Identities=14% Similarity=0.062 Sum_probs=69.3
Q ss_pred CCCEEEEECCCCchHHHHHhhC------------------------------------------CCccccCChhhhhHHH
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH------------------------------------------DIIAMSLAPNDVHENQ 252 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~------------------------------------------~v~~vdis~~dis~~~ 252 (452)
+..+|||++||+|.++..++.. .|+|+|+++.++..+.
T Consensus 195 ~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar 274 (385)
T 3ldu_A 195 AGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIAR 274 (385)
T ss_dssp TTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHH
Confidence 3457999999999998877641 3566666666655444
Q ss_pred HHHHHHcCC--CeEEEEecCCCCCCCCCCceEEEecccccccc---ccHHHHHHHHHHhcCC--CcEEEEEeCC
Q 012961 253 IQFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL---QRDGILLLELDRLLRP--GGYFVYSSPE 319 (452)
Q Consensus 253 ~~~A~~rg~--~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~---~d~~~~L~ei~RvLkP--GG~lvi~~p~ 319 (452)
. .+...+. .+.+.+.|+.+++.+ .+||+|+++--..... .+...+.+++.++||+ ||.+++.++.
T Consensus 275 ~-Na~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~ 346 (385)
T 3ldu_A 275 E-NAEIAGVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLITSY 346 (385)
T ss_dssp H-HHHHHTCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEESC
T ss_pred H-HHHHcCCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEECC
Confidence 2 2333354 488999999888765 5899999865322222 2334577777778876 8888877654
No 259
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.16 E-value=2.9e-06 Score=86.32 Aligned_cols=140 Identities=17% Similarity=0.157 Sum_probs=84.0
Q ss_pred CCEEEEECCCCchHHHHHhhC---------------------CCccccCChhhhhHH------HHHHH-HHcC--CCeEE
Q 012961 216 IRNVLDVGCGVASFGAYLLSH---------------------DIIAMSLAPNDVHEN------QIQFA-LERG--IPSTL 265 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~---------------------~v~~vdis~~dis~~------~~~~A-~~rg--~~~~~ 265 (452)
.-+|+|+||++|..+..+... .|..-|+..+|...- ..+.. .+.+ .+..+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 468999999999888777642 122334444444221 11112 2222 12344
Q ss_pred EEec---CCCCCCCCCCceEEEeccccccccccHH---------------------------------------HHHHHH
Q 012961 266 GVLG---TKRLPYPSRSFELAHCSRCRIDWLQRDG---------------------------------------ILLLEL 303 (452)
Q Consensus 266 ~~~d---~~~lp~~d~sFDlVv~s~~~l~~~~d~~---------------------------------------~~L~ei 303 (452)
..+. ...-.||+++||+|+++. ++||+.+.. .+|+..
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~-aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~R 211 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCY-CLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIH 211 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEES-CTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEecc-eeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4433 333468899999999888 699975431 136666
Q ss_pred HHhcCCCcEEEEEeCCCCCC--Ch---------------------hhHH---------HHHHHHHHHHhC-CCEEEEEEe
Q 012961 304 DRLLRPGGYFVYSSPEAYAH--DP---------------------ENRR---------IWNAMYDLLKSM-CWKIVSKKD 350 (452)
Q Consensus 304 ~RvLkPGG~lvi~~p~~~~~--~~---------------------~~~~---------~~~~l~~ll~~~-Gf~~v~~~~ 350 (452)
.+.|+|||+++++....-.. ++ +... .-++++.++++. +|++...+.
T Consensus 212 a~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~~le~ 291 (384)
T 2efj_A 212 SEELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYLET 291 (384)
T ss_dssp HHHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEEEEEE
T ss_pred HHHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEEEEEE
Confidence 89999999999987543221 10 0000 115788888887 577777665
Q ss_pred ceeEee
Q 012961 351 QTVIWA 356 (452)
Q Consensus 351 ~~~iw~ 356 (452)
....|.
T Consensus 292 ~~~~~~ 297 (384)
T 2efj_A 292 FNAPYD 297 (384)
T ss_dssp EEEETT
T ss_pred Eeeccc
Confidence 555563
No 260
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.15 E-value=3.6e-06 Score=85.21 Aligned_cols=117 Identities=16% Similarity=0.184 Sum_probs=75.4
Q ss_pred CEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHcCC-CeEEEEecCCCCC--CCC--------------
Q 012961 217 RNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGI-PSTLGVLGTKRLP--YPS-------------- 277 (452)
Q Consensus 217 ~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg~-~~~~~~~d~~~lp--~~d-------------- 277 (452)
.+|||+|||+|.++..|+.. .|+++|+++..+..+.. .++..+. ++.+..+|+.++. +..
T Consensus 215 ~~vLDl~cG~G~~~l~la~~~~~V~gvd~~~~ai~~a~~-n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~~ 293 (369)
T 3bt7_A 215 GDLLELYCGNGNFSLALARNFDRVLATEIAKPSVAAAQY-NIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLKS 293 (369)
T ss_dssp SEEEEESCTTSHHHHHHGGGSSEEEEECCCHHHHHHHHH-HHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCGGG
T ss_pred CEEEEccCCCCHHHHHHHhcCCEEEEEECCHHHHHHHHH-HHHHcCCCceEEEECCHHHHHHHHhhcccccccccccccc
Confidence 47999999999999999873 68888888877765553 3344444 6788888876541 121
Q ss_pred CCceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEEEe
Q 012961 278 RSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKD 350 (452)
Q Consensus 278 ~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~ 350 (452)
.+||+|++..-. ..+..++.+.|+++|.+++++-.. .. .-.++..+.+ ||++...+.
T Consensus 294 ~~fD~Vv~dPPr-------~g~~~~~~~~l~~~g~ivyvsc~p-----~t--~ard~~~l~~--~y~~~~~~~ 350 (369)
T 3bt7_A 294 YQCETIFVDPPR-------SGLDSETEKMVQAYPRILYISCNP-----ET--LCKNLETLSQ--THKVERLAL 350 (369)
T ss_dssp CCEEEEEECCCT-------TCCCHHHHHHHTTSSEEEEEESCH-----HH--HHHHHHHHHH--HEEEEEEEE
T ss_pred CCCCEEEECcCc-------cccHHHHHHHHhCCCEEEEEECCH-----HH--HHHHHHHHhh--CcEEEEEEe
Confidence 379999864311 124566777888999988875321 11 1234444443 677765543
No 261
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.11 E-value=1.9e-05 Score=80.48 Aligned_cols=102 Identities=16% Similarity=0.116 Sum_probs=69.2
Q ss_pred CCEEEEECCCCchHHHHHhh--C----------------------------------------CCccccCChhhhhHHHH
Q 012961 216 IRNVLDVGCGVASFGAYLLS--H----------------------------------------DIIAMSLAPNDVHENQI 253 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~--~----------------------------------------~v~~vdis~~dis~~~~ 253 (452)
...|||.+||+|.++..++. . .|+++|+++.++..+.
T Consensus 195 ~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar- 273 (384)
T 3ldg_A 195 DKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIAR- 273 (384)
T ss_dssp TSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHH-
T ss_pred CCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHH-
Confidence 45799999999999877663 1 2666766666655444
Q ss_pred HHHHHcCC--CeEEEEecCCCCCCCCCCceEEEecccccccc---ccHHHHHHHHHHhcCC--CcEEEEEeCC
Q 012961 254 QFALERGI--PSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL---QRDGILLLELDRLLRP--GGYFVYSSPE 319 (452)
Q Consensus 254 ~~A~~rg~--~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~---~d~~~~L~ei~RvLkP--GG~lvi~~p~ 319 (452)
+.+...+. .+.+...|+.+++.+ .+||+|+++--.-.-+ .+...+.+++.+.||+ ||.+++.++.
T Consensus 274 ~Na~~~gl~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~ 345 (384)
T 3ldg_A 274 KNAREVGLEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILTND 345 (384)
T ss_dssp HHHHHTTCTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEESC
T ss_pred HHHHHcCCCCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEECC
Confidence 33333454 478999999988876 4899999863111111 2335577777788876 9988887754
No 262
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.08 E-value=1e-05 Score=80.08 Aligned_cols=125 Identities=14% Similarity=0.056 Sum_probs=75.7
Q ss_pred CCCEEEEECCCCchHHHHHhh-----CCCccccCChhhhhHHHHHHHHHcCC-CeEEEEecCCCCCCCC---CCceEEEe
Q 012961 215 NIRNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGI-PSTLGVLGTKRLPYPS---RSFELAHC 285 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~-----~~v~~vdis~~dis~~~~~~A~~rg~-~~~~~~~d~~~lp~~d---~sFDlVv~ 285 (452)
++.+|||+|||+|..+..|+. ..|+++|+++..+.... +.++..+. ++.+...|+..++... .+||.|++
T Consensus 102 ~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~-~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl~ 180 (309)
T 2b9e_A 102 PGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMA-TLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYILL 180 (309)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEEEE
T ss_pred CCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHH-HHHHHcCCCeEEEEeCChHhcCccccccCCCCEEEE
Confidence 345899999999999998875 25778887776665444 33333354 5788888987775432 57999996
Q ss_pred c-----cccccccc-----------cH-------HHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhC-
Q 012961 286 S-----RCRIDWLQ-----------RD-------GILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSM- 341 (452)
Q Consensus 286 s-----~~~l~~~~-----------d~-------~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~- 341 (452)
. ...+...+ +. ..+|..+.++|+ ||++++++-.... .++ -+.+..++++.
T Consensus 181 D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~~--~En---e~~v~~~l~~~~ 254 (309)
T 2b9e_A 181 DPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLCQ--EEN---EDVVRDALQQNP 254 (309)
T ss_dssp CCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCCG--GGT---HHHHHHHHTTST
T ss_pred cCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCCh--HHh---HHHHHHHHHhCC
Confidence 2 11121111 11 236777888887 9999987643321 111 13455556554
Q ss_pred C-CEEE
Q 012961 342 C-WKIV 346 (452)
Q Consensus 342 G-f~~v 346 (452)
+ |+.+
T Consensus 255 ~~~~~~ 260 (309)
T 2b9e_A 255 GAFRLA 260 (309)
T ss_dssp TTEEEC
T ss_pred CcEEEe
Confidence 3 6543
No 263
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.07 E-value=6.3e-06 Score=88.85 Aligned_cols=95 Identities=15% Similarity=0.145 Sum_probs=64.0
Q ss_pred CCCEEEEECCCCchHHHHHh---hC-----CCccccCChhhhhHHHHHHHHHc--CCCeEEEEecCCCCCCCCCCceEEE
Q 012961 215 NIRNVLDVGCGVASFGAYLL---SH-----DIIAMSLAPNDVHENQIQFALER--GIPSTLGVLGTKRLPYPSRSFELAH 284 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La---~~-----~v~~vdis~~dis~~~~~~A~~r--g~~~~~~~~d~~~lp~~d~sFDlVv 284 (452)
+...|||||||+|-+....+ .+ +|++++-++...... +..++. +..++++.++.+++..| +.+|+||
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~~a~--~~v~~N~~~dkVtVI~gd~eev~LP-EKVDIIV 433 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVVTL--ENWQFEEWGSQVTVVSSDMREWVAP-EKADIIV 433 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHHHHH--HHHHHHTTGGGEEEEESCTTTCCCS-SCEEEEE
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHH--HHHHhccCCCeEEEEeCcceeccCC-cccCEEE
Confidence 44579999999998743333 22 467888776543322 333333 45689999999999887 6799999
Q ss_pred ecccccccc---ccHHHHHHHHHHhcCCCcEEE
Q 012961 285 CSRCRIDWL---QRDGILLLELDRLLRPGGYFV 314 (452)
Q Consensus 285 ~s~~~l~~~---~d~~~~L~ei~RvLkPGG~lv 314 (452)
+-. +.+. +....++....|.|||||.++
T Consensus 434 SEw--MG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 434 SEL--LGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp CCC--CBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred EEc--CcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 732 1111 222347778899999999987
No 264
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.06 E-value=6.3e-06 Score=79.38 Aligned_cols=79 Identities=11% Similarity=0.227 Sum_probs=54.6
Q ss_pred HHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHc---CCCeEEEEe
Q 012961 194 KYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALER---GIPSTLGVL 268 (452)
Q Consensus 194 ~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~r---g~~~~~~~~ 268 (452)
...+.+.+.+.. .+..+|||||||+|.++..|++. .|+++|+++.++ +.++++ ..++.+..+
T Consensus 16 ~i~~~iv~~~~~--------~~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~-----~~~~~~~~~~~~v~~i~~ 82 (255)
T 3tqs_A 16 FVLQKIVSAIHP--------QKTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLV-----AFLQKKYNQQKNITIYQN 82 (255)
T ss_dssp HHHHHHHHHHCC--------CTTCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHH-----HHHHHHHTTCTTEEEEES
T ss_pred HHHHHHHHhcCC--------CCcCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHH-----HHHHHHHhhCCCcEEEEc
Confidence 445556666653 23458999999999999999974 466666655544 444433 357899999
Q ss_pred cCCCCCCCC----CCceEEEec
Q 012961 269 GTKRLPYPS----RSFELAHCS 286 (452)
Q Consensus 269 d~~~lp~~d----~sFDlVv~s 286 (452)
|+..+++++ +.|| |+++
T Consensus 83 D~~~~~~~~~~~~~~~~-vv~N 103 (255)
T 3tqs_A 83 DALQFDFSSVKTDKPLR-VVGN 103 (255)
T ss_dssp CTTTCCGGGSCCSSCEE-EEEE
T ss_pred chHhCCHHHhccCCCeE-EEec
Confidence 999888653 5688 5544
No 265
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.02 E-value=4.8e-06 Score=88.63 Aligned_cols=116 Identities=16% Similarity=0.118 Sum_probs=72.6
Q ss_pred HHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC----------------------CCccccCChhhhhHHH
Q 012961 195 YILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH----------------------DIIAMSLAPNDVHENQ 252 (452)
Q Consensus 195 y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~----------------------~v~~vdis~~dis~~~ 252 (452)
..+.+.+++.. ....+|||.+||+|.++..+++. .++|+|+++..+..+.
T Consensus 157 iv~~mv~~l~p--------~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~ 228 (541)
T 2ar0_A 157 LIKTIIHLLKP--------QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLAL 228 (541)
T ss_dssp HHHHHHHHHCC--------CTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHH
T ss_pred HHHHHHHHhcc--------CCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHH
Confidence 44555666542 23458999999999988777541 3455555544443332
Q ss_pred HHHHHHcCCC------eEEEEecCCCCC-CCCCCceEEEeccccccccc--------------cHHHHHHHHHHhcCCCc
Q 012961 253 IQFALERGIP------STLGVLGTKRLP-YPSRSFELAHCSRCRIDWLQ--------------RDGILLLELDRLLRPGG 311 (452)
Q Consensus 253 ~~~A~~rg~~------~~~~~~d~~~lp-~~d~sFDlVv~s~~~l~~~~--------------d~~~~L~ei~RvLkPGG 311 (452)
.+.. ..+.. ..+..+|+...+ .....||+|+++-- +.... ....++..+.+.|+|||
T Consensus 229 ~nl~-l~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPP-f~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gG 306 (541)
T 2ar0_A 229 MNCL-LHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPP-FGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGG 306 (541)
T ss_dssp HHHH-TTTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCC-CTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEE
T ss_pred HHHH-HhCCCccccccCCeEeCCCcccccccccCCeEEEECCC-cccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCC
Confidence 2222 12433 567888865543 34568999998632 11110 12358999999999999
Q ss_pred EEEEEeCCC
Q 012961 312 YFVYSSPEA 320 (452)
Q Consensus 312 ~lvi~~p~~ 320 (452)
+++++.|..
T Consensus 307 r~a~V~p~~ 315 (541)
T 2ar0_A 307 RAAVVVPDN 315 (541)
T ss_dssp EEEEEEEHH
T ss_pred EEEEEecCc
Confidence 999998765
No 266
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.02 E-value=9e-06 Score=79.03 Aligned_cols=82 Identities=15% Similarity=0.124 Sum_probs=58.1
Q ss_pred HHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCC
Q 012961 194 KYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTK 271 (452)
Q Consensus 194 ~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~ 271 (452)
...+.+.+.+.. .+. +|||||||+|.++..|++. .|+++|+++.++.....+.. ..++.++.+|+.
T Consensus 34 ~i~~~Iv~~~~~--------~~~-~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~~~~~---~~~v~vi~~D~l 101 (271)
T 3fut_A 34 AHLRRIVEAARP--------FTG-PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETLS---GLPVRLVFQDAL 101 (271)
T ss_dssp HHHHHHHHHHCC--------CCS-CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHHHTT---TSSEEEEESCGG
T ss_pred HHHHHHHHhcCC--------CCC-eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC---CCCEEEEECChh
Confidence 455566666653 234 7999999999999999874 67788777766544332221 346899999998
Q ss_pred CCCCCCC-CceEEEecc
Q 012961 272 RLPYPSR-SFELAHCSR 287 (452)
Q Consensus 272 ~lp~~d~-sFDlVv~s~ 287 (452)
.+++++. .||.|+++.
T Consensus 102 ~~~~~~~~~~~~iv~Nl 118 (271)
T 3fut_A 102 LYPWEEVPQGSLLVANL 118 (271)
T ss_dssp GSCGGGSCTTEEEEEEE
T ss_pred hCChhhccCccEEEecC
Confidence 8887643 689988653
No 267
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=97.96 E-value=6.6e-06 Score=83.73 Aligned_cols=96 Identities=14% Similarity=0.079 Sum_probs=66.8
Q ss_pred CEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHc--------------CCC-eEEEEecCCCCCC-C
Q 012961 217 RNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALER--------------GIP-STLGVLGTKRLPY-P 276 (452)
Q Consensus 217 ~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~r--------------g~~-~~~~~~d~~~lp~-~ 276 (452)
.+|||+|||+|.++..++.. .|+++|+++..+..+..+..... +.. +.+...|+..+.. .
T Consensus 49 ~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~~~ 128 (378)
T 2dul_A 49 KIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAER 128 (378)
T ss_dssp SEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHHS
T ss_pred CEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHHhc
Confidence 48999999999999998863 46777777766655543333331 444 7778888655421 1
Q ss_pred CCCceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 277 SRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 277 d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
.+.||+|++.- + .....++..+.+.|++||.++++.
T Consensus 129 ~~~fD~I~lDP----~-~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 129 HRYFHFIDLDP----F-GSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp TTCEEEEEECC----S-SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCCCEEEeCC----C-CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 35799999432 1 123568999999999999988875
No 268
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.88 E-value=3.6e-06 Score=84.93 Aligned_cols=103 Identities=17% Similarity=0.249 Sum_probs=63.9
Q ss_pred CCCEEEEECCCCchHHHHHhhC--------------------CCccccCChhhhhHHHHHHHHH-cCCCeEEEEe---cC
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH--------------------DIIAMSLAPNDVHENQIQFALE-RGIPSTLGVL---GT 270 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~--------------------~v~~vdis~~dis~~~~~~A~~-rg~~~~~~~~---d~ 270 (452)
..-+|+|+||++|..+..+... .|..-|+..+|..........- ...+..+..+ ..
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSF 130 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSF 130 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCS
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhh
Confidence 3457999999999877665542 1223345555543322111100 0002233322 23
Q ss_pred CCCCCCCCCceEEEeccccccccccH---------------------------------HHHHHHHHHhcCCCcEEEEEe
Q 012961 271 KRLPYPSRSFELAHCSRCRIDWLQRD---------------------------------GILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 271 ~~lp~~d~sFDlVv~s~~~l~~~~d~---------------------------------~~~L~ei~RvLkPGG~lvi~~ 317 (452)
..-.||++++|+|+++. ++||+.+. ..+|+...+.|+|||+++++.
T Consensus 131 y~rlfp~~S~d~v~Ss~-aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~ 209 (359)
T 1m6e_X 131 YGRLFPRNTLHFIHSSY-SLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTI 209 (359)
T ss_dssp SSCCSCTTCBSCEEEES-CTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEE
T ss_pred hhccCCCCceEEEEehh-hhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 44568899999999888 69996541 235889999999999999876
Q ss_pred C
Q 012961 318 P 318 (452)
Q Consensus 318 p 318 (452)
.
T Consensus 210 ~ 210 (359)
T 1m6e_X 210 L 210 (359)
T ss_dssp E
T ss_pred e
Confidence 4
No 269
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=97.85 E-value=9.3e-06 Score=82.98 Aligned_cols=96 Identities=9% Similarity=0.051 Sum_probs=67.5
Q ss_pred CCEEEEECCCCchHHHHHhh-----CCCccccCChhhhhHHHHHHHHHcCCC---eEEEEecCCCC-C-CCCCCceEEEe
Q 012961 216 IRNVLDVGCGVASFGAYLLS-----HDIIAMSLAPNDVHENQIQFALERGIP---STLGVLGTKRL-P-YPSRSFELAHC 285 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~-----~~v~~vdis~~dis~~~~~~A~~rg~~---~~~~~~d~~~l-p-~~d~sFDlVv~ 285 (452)
+.+|||++||+|.++..++. ..|+++|+++..+.... +.++..+.. +.+..+|+..+ . ...+.||+|++
T Consensus 53 g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~-~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~l 131 (392)
T 3axs_A 53 PVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMK-ENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDL 131 (392)
T ss_dssp CEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHH-HHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEE
T ss_pred CCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-HHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEE
Confidence 35899999999999999886 24778888776665444 333344543 77888886443 1 11357999996
Q ss_pred ccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 286 SRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 286 s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
.- + .....++..+.+.|++||+++++.
T Consensus 132 DP----~-g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 132 DP----F-GTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp CC----S-SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CC----C-cCHHHHHHHHHHHhCCCCEEEEEe
Confidence 53 1 223468999999999999998876
No 270
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.83 E-value=1e-05 Score=77.95 Aligned_cols=123 Identities=15% Similarity=0.114 Sum_probs=73.2
Q ss_pred CCCEEEEECCCCchHHHHHhh----------------CCCccccCCh---hhhhHH------HHHHHHH---c-------
Q 012961 215 NIRNVLDVGCGVASFGAYLLS----------------HDIIAMSLAP---NDVHEN------QIQFALE---R------- 259 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~----------------~~v~~vdis~---~dis~~------~~~~A~~---r------- 259 (452)
+..+|||||+|+|..+..+++ ..+++++..+ .++..+ ....|++ .
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 445899999999987766432 1456777665 222211 0111221 1
Q ss_pred ---------CCCeEEEEecCCC-CCC-CC---CCceEEEecccccccccc--HHHHHHHHHHhcCCCcEEEEEeCCCCCC
Q 012961 260 ---------GIPSTLGVLGTKR-LPY-PS---RSFELAHCSRCRIDWLQR--DGILLLELDRLLRPGGYFVYSSPEAYAH 323 (452)
Q Consensus 260 ---------g~~~~~~~~d~~~-lp~-~d---~sFDlVv~s~~~l~~~~d--~~~~L~ei~RvLkPGG~lvi~~p~~~~~ 323 (452)
..++.+..+|+.+ ++. ++ ..||+|+.-.-.-.-.++ ...++.++.++|+|||.|+.-+ .
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~tys-----a 214 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFT-----S 214 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEESC-----C
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEEEe-----C
Confidence 1235677788654 442 22 279999963211111122 2569999999999999998522 1
Q ss_pred ChhhHHHHHHHHHHHHhCCCEEEEEE
Q 012961 324 DPENRRIWNAMYDLLKSMCWKIVSKK 349 (452)
Q Consensus 324 ~~~~~~~~~~l~~ll~~~Gf~~v~~~ 349 (452)
. ..+...+..+||.+.+..
T Consensus 215 a-------~~vrr~L~~aGF~v~~~~ 233 (257)
T 2qy6_A 215 A-------GFVRRGLQEAGFTMQKRK 233 (257)
T ss_dssp B-------HHHHHHHHHHTEEEEEEC
T ss_pred C-------HHHHHHHHHCCCEEEeCC
Confidence 1 246777888999977543
No 271
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=97.77 E-value=7.3e-05 Score=71.57 Aligned_cols=75 Identities=16% Similarity=0.195 Sum_probs=50.7
Q ss_pred HHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHc-CCCeEEEEecCC
Q 012961 193 DKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALER-GIPSTLGVLGTK 271 (452)
Q Consensus 193 ~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~r-g~~~~~~~~d~~ 271 (452)
....+.+.+.+.. .+..+|||||||+|.++..|++.. +..+.+.|+++.+++.++++ ..++.+..+|+.
T Consensus 17 ~~i~~~iv~~~~~--------~~~~~VLDiG~G~G~lt~~L~~~~--~~~v~avEid~~~~~~~~~~~~~~v~~i~~D~~ 86 (249)
T 3ftd_A 17 EGVLKKIAEELNI--------EEGNTVVEVGGGTGNLTKVLLQHP--LKKLYVIELDREMVENLKSIGDERLEVINEDAS 86 (249)
T ss_dssp HHHHHHHHHHTTC--------CTTCEEEEEESCHHHHHHHHTTSC--CSEEEEECCCHHHHHHHTTSCCTTEEEECSCTT
T ss_pred HHHHHHHHHhcCC--------CCcCEEEEEcCchHHHHHHHHHcC--CCeEEEEECCHHHHHHHHhccCCCeEEEEcchh
Confidence 3455666666653 234589999999999999998751 12333444555555666554 345789999999
Q ss_pred CCCCCC
Q 012961 272 RLPYPS 277 (452)
Q Consensus 272 ~lp~~d 277 (452)
.+++++
T Consensus 87 ~~~~~~ 92 (249)
T 3ftd_A 87 KFPFCS 92 (249)
T ss_dssp TCCGGG
T ss_pred hCChhH
Confidence 988764
No 272
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.77 E-value=1.8e-05 Score=85.68 Aligned_cols=97 Identities=11% Similarity=0.052 Sum_probs=65.1
Q ss_pred CCEEEEECCCCchHHHHH---h---h-----------CCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCC--
Q 012961 216 IRNVLDVGCGVASFGAYL---L---S-----------HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYP-- 276 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~L---a---~-----------~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~-- 276 (452)
...|||||||+|.++... + + ..|++++-++..+...+...+..-+..+.++.++.+++..+
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~ 489 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAK 489 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccc
Confidence 457999999999885321 1 1 16778887765443333333322245689999999988763
Q ss_pred ---CCCceEEEeccccccccc---cHHHHHHHHHHhcCCCcEEE
Q 012961 277 ---SRSFELAHCSRCRIDWLQ---RDGILLLELDRLLRPGGYFV 314 (452)
Q Consensus 277 ---d~sFDlVv~s~~~l~~~~---d~~~~L~ei~RvLkPGG~lv 314 (452)
.+..|+||+-. +.+.. -....|..+.|.|||||.++
T Consensus 490 ~~~~ekVDIIVSEl--mGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 490 DRGFEQPDIIVSEL--LGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HTTCCCCSEEEECC--CBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred cCCCCcccEEEEec--cccccchhccHHHHHHHHHhCCCCcEEE
Confidence 47899999743 32222 12457888899999999877
No 273
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=97.76 E-value=2.6e-05 Score=76.05 Aligned_cols=72 Identities=13% Similarity=0.157 Sum_probs=50.3
Q ss_pred HHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC--C----CccccCChhhhhHHHHHHHHHcCCCeEEEE
Q 012961 194 KYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH--D----IIAMSLAPNDVHENQIQFALERGIPSTLGV 267 (452)
Q Consensus 194 ~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~--~----v~~vdis~~dis~~~~~~A~~rg~~~~~~~ 267 (452)
...+.+.+.+.. .+..+|||||||+|.++..|++. . |+++|+++.++..+... + ..++.++.
T Consensus 29 ~i~~~iv~~~~~--------~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~-~---~~~v~~i~ 96 (279)
T 3uzu_A 29 GVIDAIVAAIRP--------ERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQR-F---GELLELHA 96 (279)
T ss_dssp HHHHHHHHHHCC--------CTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHH-H---GGGEEEEE
T ss_pred HHHHHHHHhcCC--------CCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHh-c---CCCcEEEE
Confidence 445556666653 23458999999999999999863 3 77777766655444322 1 44688999
Q ss_pred ecCCCCCCCC
Q 012961 268 LGTKRLPYPS 277 (452)
Q Consensus 268 ~d~~~lp~~d 277 (452)
+|+..+++++
T Consensus 97 ~D~~~~~~~~ 106 (279)
T 3uzu_A 97 GDALTFDFGS 106 (279)
T ss_dssp SCGGGCCGGG
T ss_pred CChhcCChhH
Confidence 9999888753
No 274
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.74 E-value=0.00011 Score=72.16 Aligned_cols=104 Identities=16% Similarity=0.200 Sum_probs=70.5
Q ss_pred CCCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHc----------CCCeEEEEecCCCC-CCCCCC
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALER----------GIPSTLGVLGTKRL-PYPSRS 279 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~r----------g~~~~~~~~d~~~l-p~~d~s 279 (452)
++++||=||-|.|..+..+++. .|+.+++++. .++.+++. ..++.++..|...+ .-..++
T Consensus 83 ~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~-----Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~ 157 (294)
T 3o4f_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAG-----VVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQT 157 (294)
T ss_dssp CCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHH-----HHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCC
T ss_pred CCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHH-----HHHHHHhcCccccccccCCCcEEEEechHHHHHhhcccc
Confidence 5679999999999999999874 3455555554 44444332 35688999996554 344578
Q ss_pred ceEEEeccccccccc----cHHHHHHHHHHhcCCCcEEEEEeCCCCCCC
Q 012961 280 FELAHCSRCRIDWLQ----RDGILLLELDRLLRPGGYFVYSSPEAYAHD 324 (452)
Q Consensus 280 FDlVv~s~~~l~~~~----d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~ 324 (452)
||+|+.-. .-...+ --..+++.+.++|+|||+++......+...
T Consensus 158 yDvIi~D~-~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~sp~~~~ 205 (294)
T 3o4f_A 158 FDVIISDC-TDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQ 205 (294)
T ss_dssp EEEEEESC-CCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEESSSCC
T ss_pred CCEEEEeC-CCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCCcccCh
Confidence 99999632 111111 114589999999999999998765444333
No 275
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.71 E-value=0.00017 Score=79.11 Aligned_cols=118 Identities=14% Similarity=0.026 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhh------------------------------------
Q 012961 192 ADKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLS------------------------------------ 235 (452)
Q Consensus 192 ~~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~------------------------------------ 235 (452)
.+.....+..+... .....|||.+||+|.++..++.
T Consensus 175 ~e~LAa~ll~~~~~--------~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~ 246 (703)
T 3v97_A 175 KETLAAAIVMRSGW--------QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQT 246 (703)
T ss_dssp CHHHHHHHHHHTTC--------CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhhCC--------CCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHH
Confidence 34455555554432 2335799999999999876653
Q ss_pred ----------CCCccccCChhhhhHHHHHHHHHcCCC--eEEEEecCCCCC--CCCCCceEEEecccc-ccc--cccHHH
Q 012961 236 ----------HDIIAMSLAPNDVHENQIQFALERGIP--STLGVLGTKRLP--YPSRSFELAHCSRCR-IDW--LQRDGI 298 (452)
Q Consensus 236 ----------~~v~~vdis~~dis~~~~~~A~~rg~~--~~~~~~d~~~lp--~~d~sFDlVv~s~~~-l~~--~~d~~~ 298 (452)
..++|+|+++.++..+. ..+...|.. +.+...|+.++. ..+++||+|+++--. ... ..+...
T Consensus 247 ~~~~~~~~~~~~i~G~Did~~av~~A~-~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ 325 (703)
T 3v97_A 247 RARKGLAEYSSHFYGSDSDARVIQRAR-TNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIA 325 (703)
T ss_dssp HHHHHHHHCCCCEEEEESCHHHHHHHH-HHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHH
T ss_pred HhhhccccCCccEEEEECCHHHHHHHH-HHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHH
Confidence 14556666665554443 333344554 788999988774 334489999987310 001 112223
Q ss_pred H---HHHHHHhcCCCcEEEEEeC
Q 012961 299 L---LLELDRLLRPGGYFVYSSP 318 (452)
Q Consensus 299 ~---L~ei~RvLkPGG~lvi~~p 318 (452)
+ +.++.+.+.|||.+++.++
T Consensus 326 ly~~l~~~lk~~~~g~~~~ilt~ 348 (703)
T 3v97_A 326 LHSLLGRIMKNQFGGWNLSLFSA 348 (703)
T ss_dssp HHHHHHHHHHHHCTTCEEEEEES
T ss_pred HHHHHHHHHHhhCCCCeEEEEeC
Confidence 3 4455556668999998764
No 276
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.69 E-value=0.00026 Score=71.40 Aligned_cols=119 Identities=9% Similarity=-0.021 Sum_probs=76.2
Q ss_pred CCCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEeccccccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDW 292 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~ 292 (452)
++.++||+||++|.++..|+++ .|+++|..+.+. .. .....+.+...|...+..+.+.||+|+|-..
T Consensus 211 ~G~~vlDLGAaPGGWT~~l~~rg~~V~aVD~~~l~~--~l-----~~~~~V~~~~~d~~~~~~~~~~~D~vvsDm~---- 279 (375)
T 4auk_A 211 NGMWAVDLGACPGGWTYQLVKRNMWVYSVDNGPMAQ--SL-----MDTGQVTWLREDGFKFRPTRSNISWMVCDMV---- 279 (375)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCEEEEECSSCCCH--HH-----HTTTCEEEECSCTTTCCCCSSCEEEEEECCS----
T ss_pred CCCEEEEeCcCCCHHHHHHHHCCCEEEEEEhhhcCh--hh-----ccCCCeEEEeCccccccCCCCCcCEEEEcCC----
Confidence 4468999999999999999975 688888765442 11 1235688888998888777778999998652
Q ss_pred cccHHHHHHHHHHhcCCC---cEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEE
Q 012961 293 LQRDGILLLELDRLLRPG---GYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKI 345 (452)
Q Consensus 293 ~~d~~~~L~ei~RvLkPG---G~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~ 345 (452)
.++...+.-+.+.|..| +.++..-.+..............+...++..|+..
T Consensus 280 -~~p~~~~~l~~~wl~~~~~~~aI~~lKL~mk~~~~~l~~~~~~i~~~l~~~g~~~ 334 (375)
T 4auk_A 280 -EKPAKVAALMAQWLVNGWCRETIFNLKLPMKKRYEEVSHNLAYIQAQLDEHGINA 334 (375)
T ss_dssp -SCHHHHHHHHHHHHHTTSCSEEEEEEECCSSSHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred -CChHHhHHHHHHHHhccccceEEEEEEecccchHHHHHHHHHHHHHHHHhcCcch
Confidence 23444555555555444 44333222221112222334567788888888853
No 277
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.62 E-value=0.00017 Score=76.69 Aligned_cols=141 Identities=13% Similarity=0.083 Sum_probs=82.9
Q ss_pred HHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhhC-------CCccccCChhhhhHHHHHHHHHcCC---CeE
Q 012961 195 YILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLSH-------DIIAMSLAPNDVHENQIQFALERGI---PST 264 (452)
Q Consensus 195 y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~~-------~v~~vdis~~dis~~~~~~A~~rg~---~~~ 264 (452)
..+.+.+++.... ......+|||.+||+|.+...+++. .+.|+|+.+.....+..+... .+. +..
T Consensus 205 Vv~lmv~ll~~~~----~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l-~gi~~~~~~ 279 (542)
T 3lkd_A 205 VAKLMTQIAFLGR----EDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMIL-HGVPIENQF 279 (542)
T ss_dssp HHHHHHHHHHTTC----TTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHH-TTCCGGGEE
T ss_pred HHHHHHHHHhccc----CCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHH-cCCCcCccc
Confidence 4555566555211 0124558999999999988776542 345666555544444333322 344 457
Q ss_pred EEEecCCCC--C-CCCCCceEEEecccc-ccc-----------------c---cc-HHHHHHHHHHhcC-CCcEEEEEeC
Q 012961 265 LGVLGTKRL--P-YPSRSFELAHCSRCR-IDW-----------------L---QR-DGILLLELDRLLR-PGGYFVYSSP 318 (452)
Q Consensus 265 ~~~~d~~~l--p-~~d~sFDlVv~s~~~-l~~-----------------~---~d-~~~~L~ei~RvLk-PGG~lvi~~p 318 (452)
+..+|+... | .....||+|+++--. ..| . .+ .-.++..+.+.|+ |||+++++.|
T Consensus 280 I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP 359 (542)
T 3lkd_A 280 LHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLP 359 (542)
T ss_dssp EEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEE
T ss_pred eEecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEec
Confidence 888887655 3 346789999985210 001 0 00 1238999999999 9999999998
Q ss_pred CCCCCChhhHHHHHHHHHHHHhCCC
Q 012961 319 EAYAHDPENRRIWNAMYDLLKSMCW 343 (452)
Q Consensus 319 ~~~~~~~~~~~~~~~l~~ll~~~Gf 343 (452)
..+..... ....+++.+-+.+.
T Consensus 360 ~g~Lf~~~---~~~~iRk~Lle~~~ 381 (542)
T 3lkd_A 360 HGVLFRGN---AEGTIRKALLEEGA 381 (542)
T ss_dssp THHHHCCT---HHHHHHHHHHHTTC
T ss_pred chHhhCCc---hhHHHHHHHHhCCc
Confidence 76421111 12345555544444
No 278
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=97.62 E-value=2.2e-05 Score=75.62 Aligned_cols=72 Identities=17% Similarity=0.100 Sum_probs=48.0
Q ss_pred CCEEEEECCCCchHHHHHhhC--CCccccCChhhhh--HHHHHHHHHc----C--CCeEEEEecCCCC-C-CCC--CCce
Q 012961 216 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVH--ENQIQFALER----G--IPSTLGVLGTKRL-P-YPS--RSFE 281 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis--~~~~~~A~~r----g--~~~~~~~~d~~~l-p-~~d--~sFD 281 (452)
..+|||+|||+|.++..|+.. .|+++|+++.... ..+++.|+++ + .++.+..+|+..+ + +++ ++||
T Consensus 84 ~~~VLDlgcG~G~~a~~lA~~g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~~fD 163 (258)
T 2r6z_A 84 HPTVWDATAGLGRDSFVLASLGLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQGKPD 163 (258)
T ss_dssp CCCEEETTCTTCHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHCCCS
T ss_pred cCeEEEeeCccCHHHHHHHHhCCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCCCcc
Confidence 347999999999999999864 6777777771100 0333333322 2 2488888887664 3 444 6899
Q ss_pred EEEecc
Q 012961 282 LAHCSR 287 (452)
Q Consensus 282 lVv~s~ 287 (452)
+|++..
T Consensus 164 ~V~~dP 169 (258)
T 2r6z_A 164 IVYLDP 169 (258)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 999865
No 279
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.61 E-value=9.8e-05 Score=78.55 Aligned_cols=138 Identities=13% Similarity=0.084 Sum_probs=79.7
Q ss_pred HHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhh-------------------CCCccccCChhhhhHHHHH
Q 012961 194 KYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLS-------------------HDIIAMSLAPNDVHENQIQ 254 (452)
Q Consensus 194 ~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~-------------------~~v~~vdis~~dis~~~~~ 254 (452)
...+.+.+++.. .. .+|||.+||+|.+...+++ ..+.|+|+.+..+..+..+
T Consensus 232 ~Vv~lmv~ll~p--------~~-~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~N 302 (544)
T 3khk_A 232 SIVTLIVEMLEP--------YK-GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMN 302 (544)
T ss_dssp HHHHHHHHHHCC--------CS-EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhc--------CC-CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHH
Confidence 445556666642 12 2899999999998877642 2345555555544333333
Q ss_pred HHHHcCCCeEE--EEecCCCCC-CCCCCceEEEeccccc--ccc----------------------c---c-HHHHHHHH
Q 012961 255 FALERGIPSTL--GVLGTKRLP-YPSRSFELAHCSRCRI--DWL----------------------Q---R-DGILLLEL 303 (452)
Q Consensus 255 ~A~~rg~~~~~--~~~d~~~lp-~~d~sFDlVv~s~~~l--~~~----------------------~---d-~~~~L~ei 303 (452)
... .+....+ ..+|+...+ +++..||+|+++--.. .|. + + .-.++..+
T Consensus 303 l~l-~gi~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~ 381 (544)
T 3khk_A 303 MVI-RGIDFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHM 381 (544)
T ss_dssp HHH-TTCCCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHH
T ss_pred HHH-hCCCcccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHH
Confidence 222 3444334 566654443 4567899999853111 010 0 0 12589999
Q ss_pred HHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCC
Q 012961 304 DRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCW 343 (452)
Q Consensus 304 ~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf 343 (452)
.+.|+|||+++++.|........ .....+++.+-+.+.
T Consensus 382 l~~Lk~gGr~aiVlP~g~L~~~~--~~~~~iRk~Lle~~~ 419 (544)
T 3khk_A 382 LYHLAPTGSMALLLANGSMSSNT--NNEGEIRKTLVEQDL 419 (544)
T ss_dssp HHTEEEEEEEEEEEETHHHHCCG--GGHHHHHHHHHHTTC
T ss_pred HHHhccCceEEEEecchhhhcCc--chHHHHHHHHHhCCc
Confidence 99999999999998865421110 123456655555554
No 280
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.61 E-value=6.2e-05 Score=72.91 Aligned_cols=102 Identities=17% Similarity=0.130 Sum_probs=59.8
Q ss_pred CCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEecccccc
Q 012961 216 IRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRID 291 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~ 291 (452)
..+|||||||.|.|+.+++.. .+.++|+.......+ +.. ...+.++.....+.....++.+.+|+|+|.. +.+
T Consensus 91 ~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~p-i~~-~~~g~~ii~~~~~~dv~~l~~~~~DvVLSDm-Apn 167 (282)
T 3gcz_A 91 TGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKP-IMR-TTLGWNLIRFKDKTDVFNMEVIPGDTLLCDI-GES 167 (282)
T ss_dssp CEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCC-CCC-CBTTGGGEEEECSCCGGGSCCCCCSEEEECC-CCC
T ss_pred CCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccc-ccc-ccCCCceEEeeCCcchhhcCCCCcCEEEecC-ccC
Confidence 348999999999999998853 345555543211000 000 0012233333333333345568899999865 333
Q ss_pred ----ccccHH--HHHHHHHHhcCCC--cEEEEEeCCC
Q 012961 292 ----WLQRDG--ILLLELDRLLRPG--GYFVYSSPEA 320 (452)
Q Consensus 292 ----~~~d~~--~~L~ei~RvLkPG--G~lvi~~p~~ 320 (452)
+.+... .+|.-+.++|+|| |.|++-....
T Consensus 168 sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~p 204 (282)
T 3gcz_A 168 SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLCP 204 (282)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESCC
T ss_pred CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEecC
Confidence 222222 2577778999999 9999977543
No 281
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.54 E-value=0.00028 Score=68.78 Aligned_cols=103 Identities=16% Similarity=0.190 Sum_probs=60.0
Q ss_pred CCCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEeccccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRI 290 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l 290 (452)
+..+||||||++|.|+.++++. .|.++|+...+...... ....+.++.....+.....+..+.+|+|+|.. +.
T Consensus 81 ~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~--~~~~~~~iv~~~~~~di~~l~~~~~DlVlsD~-AP 157 (300)
T 3eld_A 81 ITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH--MQTLGWNIVKFKDKSNVFTMPTEPSDTLLCDI-GE 157 (300)
T ss_dssp CCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC--CCBTTGGGEEEECSCCTTTSCCCCCSEEEECC-CC
T ss_pred CCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc--ccccCCceEEeecCceeeecCCCCcCEEeecC-cC
Confidence 4568999999999999999974 34556664321100000 00001122222222333344567899999865 33
Q ss_pred c----ccccH--HHHHHHHHHhcCCC-cEEEEEeCCC
Q 012961 291 D----WLQRD--GILLLELDRLLRPG-GYFVYSSPEA 320 (452)
Q Consensus 291 ~----~~~d~--~~~L~ei~RvLkPG-G~lvi~~p~~ 320 (452)
+ ..+.. ..+|.-+.++|+|| |.|++-....
T Consensus 158 nsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~~ 194 (300)
T 3eld_A 158 SSSNPLVERDRTMKVLENFERWKHVNTENFCVKVLAP 194 (300)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESST
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeccc
Confidence 3 11111 22577778999999 9999976543
No 282
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.44 E-value=0.00044 Score=64.12 Aligned_cols=91 Identities=7% Similarity=-0.061 Sum_probs=57.9
Q ss_pred CCEEEEECCCCchHHHHHhh---CCCccccCChhhhhHHHHHHHHHcCC----CeEEEEecCCC---------------C
Q 012961 216 IRNVLDVGCGVASFGAYLLS---HDIIAMSLAPNDVHENQIQFALERGI----PSTLGVLGTKR---------------L 273 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~---~~v~~vdis~~dis~~~~~~A~~rg~----~~~~~~~d~~~---------------l 273 (452)
.++||||||| +.+..|++ ..|++++.++.....+...+ .+.+. ++.++.+++.. +
T Consensus 31 a~~VLEiGtG--ySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l-~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l 107 (202)
T 3cvo_A 31 AEVILEYGSG--GSTVVAAELPGKHVTSVESDRAWARMMKAWL-AANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSY 107 (202)
T ss_dssp CSEEEEESCS--HHHHHHHTSTTCEEEEEESCHHHHHHHHHHH-HHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGT
T ss_pred CCEEEEECch--HHHHHHHHcCCCEEEEEeCCHHHHHHHHHHH-HHcCCCCCCceEEEEeCchhhhcccccccchhhhhH
Confidence 3589999985 56666664 35677777665544433223 33343 47788888543 2
Q ss_pred C--------C-CCCCceEEEeccccccccccHHHHHHHHHHhcCCCcEEEE
Q 012961 274 P--------Y-PSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVY 315 (452)
Q Consensus 274 p--------~-~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi 315 (452)
+ . ..++||+|+.-.. .....+..+.+.|+|||++++
T Consensus 108 ~~~~~~i~~~~~~~~fDlIfIDg~------k~~~~~~~~l~~l~~GG~Iv~ 152 (202)
T 3cvo_A 108 PDYPLAVWRTEGFRHPDVVLVDGR------FRVGCALATAFSITRPVTLLF 152 (202)
T ss_dssp THHHHGGGGCTTCCCCSEEEECSS------SHHHHHHHHHHHCSSCEEEEE
T ss_pred HHHhhhhhccccCCCCCEEEEeCC------CchhHHHHHHHhcCCCeEEEE
Confidence 2 1 2368999985431 113566677899999999966
No 283
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.44 E-value=0.00014 Score=74.61 Aligned_cols=105 Identities=11% Similarity=-0.051 Sum_probs=65.2
Q ss_pred CCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHc--CC-CeEEEEecCCCC-CC-CCCCceEEEeccc
Q 012961 216 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALER--GI-PSTLGVLGTKRL-PY-PSRSFELAHCSRC 288 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~r--g~-~~~~~~~d~~~l-p~-~d~sFDlVv~s~~ 288 (452)
+.+|||+|||+|..+..|+.. .|+++|+++.++..+..+.. .. +. ++.+..+|+.+. +. ++++||+|++.-.
T Consensus 94 g~~VLDLgcG~G~~al~LA~~g~~V~~VD~s~~~l~~Ar~N~~-~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lDPP 172 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSKASQGIYIERNDETAVAARHNIP-LLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVDPA 172 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHH-HHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEECCE
T ss_pred CCEEEEeCCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHhHH-HhccCCCcEEEEECcHHHhhhhccCCCceEEEECCC
Confidence 458999999999999999864 57788887777655543333 22 43 578899997764 32 2358999998421
Q ss_pred -------cccccccHHHHHHHHHHhcC-CCcEEEEEeCCCC
Q 012961 289 -------RIDWLQRDGILLLELDRLLR-PGGYFVYSSPEAY 321 (452)
Q Consensus 289 -------~l~~~~d~~~~L~ei~RvLk-PGG~lvi~~p~~~ 321 (452)
.+..+++..--+.++.+.|. .+..+++-.++..
T Consensus 173 rr~~~~grv~~led~~P~l~~~~~~l~~~~~~~~vK~sP~l 213 (410)
T 3ll7_A 173 RRSGADKRVYAIADCEPDLIPLATELLPFCSSILAKLSPMI 213 (410)
T ss_dssp EC-----CCCCGGGEESCHHHHHHHHGGGSSEEEEEECTTS
T ss_pred CcCCCCceEEehhhcCCCHHHHHHHHHhhCCcEEEEcCCCC
Confidence 11122222223555555443 4456666655543
No 284
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=97.39 E-value=9e-05 Score=73.01 Aligned_cols=68 Identities=15% Similarity=0.166 Sum_probs=47.7
Q ss_pred CCCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHc----CCCeEEEEecCCCCC--CC---CCCce
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALER----GIPSTLGVLGTKRLP--YP---SRSFE 281 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~r----g~~~~~~~~d~~~lp--~~---d~sFD 281 (452)
+..+|||+|||+|.++..+++. .|+++|+++.++ +.|+++ +.++.+..+|+..++ +. .++||
T Consensus 26 ~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al-----~~A~~~~~~~g~~v~~v~~d~~~l~~~l~~~g~~~~D 100 (301)
T 1m6y_A 26 DEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVL-----RIAEEKLKEFSDRVSLFKVSYREADFLLKTLGIEKVD 100 (301)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHH-----HHHHHHTGGGTTTEEEEECCGGGHHHHHHHTTCSCEE
T ss_pred CCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHH-----HHHHHHHHhcCCcEEEEECCHHHHHHHHHhcCCCCCC
Confidence 3458999999999999999863 455665555544 444433 357889999987765 11 15799
Q ss_pred EEEecc
Q 012961 282 LAHCSR 287 (452)
Q Consensus 282 lVv~s~ 287 (452)
.|++..
T Consensus 101 ~Vl~D~ 106 (301)
T 1m6y_A 101 GILMDL 106 (301)
T ss_dssp EEEEEC
T ss_pred EEEEcC
Confidence 998643
No 285
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=97.38 E-value=0.00011 Score=70.46 Aligned_cols=79 Identities=8% Similarity=0.017 Sum_probs=51.2
Q ss_pred HHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhh-CC--CccccCChhhhhHHHHHHHHHcC---CCeEEEE
Q 012961 194 KYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLS-HD--IIAMSLAPNDVHENQIQFALERG---IPSTLGV 267 (452)
Q Consensus 194 ~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~-~~--v~~vdis~~dis~~~~~~A~~rg---~~~~~~~ 267 (452)
...+.+.+.+.. .+..+|||||||+|.++. +.. .. |+++|++ +.+++.++++. .++.+..
T Consensus 8 ~i~~~iv~~~~~--------~~~~~VLEIG~G~G~lt~-l~~~~~~~v~avEid-----~~~~~~a~~~~~~~~~v~~i~ 73 (252)
T 1qyr_A 8 FVIDSIVSAINP--------QKGQAMVEIGPGLAALTE-PVGERLDQLTVIELD-----RDLAARLQTHPFLGPKLTIYQ 73 (252)
T ss_dssp HHHHHHHHHHCC--------CTTCCEEEECCTTTTTHH-HHHTTCSCEEEECCC-----HHHHHHHHTCTTTGGGEEEEC
T ss_pred HHHHHHHHhcCC--------CCcCEEEEECCCCcHHHH-hhhCCCCeEEEEECC-----HHHHHHHHHHhccCCceEEEE
Confidence 345556665543 233479999999999999 754 23 5666554 45556665543 2588999
Q ss_pred ecCCCCCCCCC-----CceEEEec
Q 012961 268 LGTKRLPYPSR-----SFELAHCS 286 (452)
Q Consensus 268 ~d~~~lp~~d~-----sFDlVv~s 286 (452)
+|+..+++++. ..|.|+++
T Consensus 74 ~D~~~~~~~~~~~~~~~~~~vvsN 97 (252)
T 1qyr_A 74 QDAMTFNFGELAEKMGQPLRVFGN 97 (252)
T ss_dssp SCGGGCCHHHHHHHHTSCEEEEEE
T ss_pred CchhhCCHHHhhcccCCceEEEEC
Confidence 99988876532 34667654
No 286
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.37 E-value=0.00038 Score=76.55 Aligned_cols=107 Identities=14% Similarity=0.094 Sum_probs=65.0
Q ss_pred CCEEEEECCCCchHHHHHhhC-------CCccccCChhhhhHHHHHHHHH-----cCCCe-EEEEecCCCC-CCCCCCce
Q 012961 216 IRNVLDVGCGVASFGAYLLSH-------DIIAMSLAPNDVHENQIQFALE-----RGIPS-TLGVLGTKRL-PYPSRSFE 281 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~-------~v~~vdis~~dis~~~~~~A~~-----rg~~~-~~~~~d~~~l-p~~d~sFD 281 (452)
..+|||.|||+|.++..++.. .+.|+|+++..+..+..+.... .+... .+...|.... +...+.||
T Consensus 322 g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kFD 401 (878)
T 3s1s_A 322 DEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANVS 401 (878)
T ss_dssp TCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTEE
T ss_pred CCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCCC
Confidence 458999999999999988763 2456666665443331111111 12222 3443444332 22346899
Q ss_pred EEEecccccc-cc--c------------------------c-HHHHHHHHHHhcCCCcEEEEEeCCCCC
Q 012961 282 LAHCSRCRID-WL--Q------------------------R-DGILLLELDRLLRPGGYFVYSSPEAYA 322 (452)
Q Consensus 282 lVv~s~~~l~-~~--~------------------------d-~~~~L~ei~RvLkPGG~lvi~~p~~~~ 322 (452)
+|+++--... +. . + ...++..+.+.|+|||++++..|..+.
T Consensus 402 VVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~L 470 (878)
T 3s1s_A 402 VVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQYL 470 (878)
T ss_dssp EEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHHH
T ss_pred EEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChHHh
Confidence 9998642111 00 0 0 234788899999999999999987653
No 287
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.27 E-value=0.0025 Score=60.95 Aligned_cols=95 Identities=18% Similarity=0.166 Sum_probs=55.5
Q ss_pred CCCEEEEECCCCchHHHHHhhC--------CCcccc--CChhhhhHHHHHHHHHcCCCe-EEEEe-cCCCCCCCCCCceE
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH--------DIIAMS--LAPNDVHENQIQFALERGIPS-TLGVL-GTKRLPYPSRSFEL 282 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~--------~v~~vd--is~~dis~~~~~~A~~rg~~~-~~~~~-d~~~lp~~d~sFDl 282 (452)
+..+|||+||+.|+++.+.++. .++++| +.+.+... .|.++ .+..+ |+.+++ ...+|+
T Consensus 73 pg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~~~--------~Gv~~i~~~~G~Df~~~~--~~~~Dv 142 (269)
T 2px2_A 73 PIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLMQS--------YGWNIVTMKSGVDVFYKP--SEISDT 142 (269)
T ss_dssp CCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCCCS--------TTGGGEEEECSCCGGGSC--CCCCSE
T ss_pred CCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcccC--------CCceEEEeeccCCccCCC--CCCCCE
Confidence 3458999999999999999874 123344 22221100 12222 33334 766543 457999
Q ss_pred EEecccc---ccccccHH--HHHHHHHHhcCCCc-EEEEEeCC
Q 012961 283 AHCSRCR---IDWLQRDG--ILLLELDRLLRPGG-YFVYSSPE 319 (452)
Q Consensus 283 Vv~s~~~---l~~~~d~~--~~L~ei~RvLkPGG-~lvi~~p~ 319 (452)
|+|-.+- ....+... .+|.-+.++|+||| .|++-...
T Consensus 143 VLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFq 185 (269)
T 2px2_A 143 LLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILC 185 (269)
T ss_dssp EEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred EEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECC
Confidence 9985421 11111111 15666779999999 88886643
No 288
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=96.97 E-value=0.0014 Score=57.44 Aligned_cols=78 Identities=17% Similarity=0.226 Sum_probs=50.5
Q ss_pred CEEEEECCCCc-hHHHHHhh-C--CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCC--CCceEEEeccccc
Q 012961 217 RNVLDVGCGVA-SFGAYLLS-H--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPS--RSFELAHCSRCRI 290 (452)
Q Consensus 217 ~~VLDIGCG~G-~~~~~La~-~--~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d--~sFDlVv~s~~~l 290 (452)
.+|||||||.| ..+..|++ . .|+++|+++..+. ++..|+.+ |..+ ..||+|++.+.-
T Consensus 37 ~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~---------------~v~dDiF~-P~~~~Y~~~DLIYsirPP- 99 (153)
T 2k4m_A 37 TRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG---------------IVRDDITS-PRMEIYRGAALIYSIRPP- 99 (153)
T ss_dssp SEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT---------------EECCCSSS-CCHHHHTTEEEEEEESCC-
T ss_pred CcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc---------------eEEccCCC-CcccccCCcCEEEEcCCC-
Confidence 48999999999 69999986 4 3667777665543 55555544 3222 379999977643
Q ss_pred cccccHHHHHHHHHHhcCCCcEEEEE
Q 012961 291 DWLQRDGILLLELDRLLRPGGYFVYS 316 (452)
Q Consensus 291 ~~~~d~~~~L~ei~RvLkPGG~lvi~ 316 (452)
++....+.++.+.+ |.-++|.
T Consensus 100 ---~El~~~i~~lA~~v--~adliI~ 120 (153)
T 2k4m_A 100 ---AEIHSSLMRVADAV--GARLIIK 120 (153)
T ss_dssp ---TTTHHHHHHHHHHH--TCEEEEE
T ss_pred ---HHHHHHHHHHHHHc--CCCEEEE
Confidence 33344555665544 4556654
No 289
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=96.95 E-value=0.00039 Score=66.95 Aligned_cols=93 Identities=12% Similarity=0.020 Sum_probs=56.1
Q ss_pred CEEEEECCCCchHHHHHhh--CCCccccCChhhhhHH--HHHHHHHc----C---CCeEEEEecCCC-CCCCCCCceEEE
Q 012961 217 RNVLDVGCGVASFGAYLLS--HDIIAMSLAPNDVHEN--QIQFALER----G---IPSTLGVLGTKR-LPYPSRSFELAH 284 (452)
Q Consensus 217 ~~VLDIGCG~G~~~~~La~--~~v~~vdis~~dis~~--~~~~A~~r----g---~~~~~~~~d~~~-lp~~d~sFDlVv 284 (452)
.+|||+|||+|..+..++. ..|+++|.++....-. .++.+.+. + .++.+..+|..+ ++....+||+|+
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fDvV~ 169 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQVVY 169 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHTCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCSEEE
T ss_pred CEEEEcCCcCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcccCCEEE
Confidence 5899999999999999986 4688888877542221 12223211 1 247788888655 332224799999
Q ss_pred eccccccccccHHHHHHHHHHhcCCCc
Q 012961 285 CSRCRIDWLQRDGILLLELDRLLRPGG 311 (452)
Q Consensus 285 ~s~~~l~~~~d~~~~L~ei~RvLkPGG 311 (452)
+.. .++. .....++++..++|++.+
T Consensus 170 lDP-~y~~-~~~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 170 LDP-MFPH-KQKSALVKKEMRVFQSLV 194 (258)
T ss_dssp ECC-CCCC-CCC-----HHHHHHHHHS
T ss_pred EcC-CCCC-cccchHHHHHHHHHHHhh
Confidence 765 2333 222346677777777755
No 290
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=96.94 E-value=0.0033 Score=61.22 Aligned_cols=135 Identities=13% Similarity=0.069 Sum_probs=79.3
Q ss_pred CCCEEEEECCCCchHHHHHh---------hCCCccccCChh-----------h-------------hh-HHHHHHHHHcC
Q 012961 215 NIRNVLDVGCGVASFGAYLL---------SHDIIAMSLAPN-----------D-------------VH-ENQIQFALERG 260 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La---------~~~v~~vdis~~-----------d-------------is-~~~~~~A~~rg 260 (452)
.+..|||+|+..|..+..|+ ++.|+++|.... + .. +...+...+.+
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~g 185 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYD 185 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTT
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcC
Confidence 34589999999998877764 235667775321 1 00 11122223333
Q ss_pred ---CCeEEEEecCCC-CC-CCCCCceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHH
Q 012961 261 ---IPSTLGVLGTKR-LP-YPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMY 335 (452)
Q Consensus 261 ---~~~~~~~~d~~~-lp-~~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~ 335 (452)
.++.++.+++.+ ++ +++++||+|+.-.. ........|+.+...|+|||++++-+.. + .+.. -..+.
T Consensus 186 l~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD---~y~~~~~~Le~~~p~L~pGGiIv~DD~~-~--~~G~---~~Av~ 256 (282)
T 2wk1_A 186 LLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGD---LYESTWDTLTNLYPKVSVGGYVIVDDYM-M--CPPC---KDAVD 256 (282)
T ss_dssp CCSTTEEEEESCHHHHSTTCCCCCEEEEEECCC---SHHHHHHHHHHHGGGEEEEEEEEESSCT-T--CHHH---HHHHH
T ss_pred CCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCC---ccccHHHHHHHHHhhcCCCEEEEEcCCC-C--CHHH---HHHHH
Confidence 358888888533 43 34578999985432 1122346899999999999999985532 1 1222 24555
Q ss_pred HHHHhCCCEE--EEEEeceeEeecc
Q 012961 336 DLLKSMCWKI--VSKKDQTVIWAKP 358 (452)
Q Consensus 336 ~ll~~~Gf~~--v~~~~~~~iw~kp 358 (452)
++.++.+++. .......+.|+|+
T Consensus 257 Ef~~~~~i~~~i~~~~~~~v~~rk~ 281 (282)
T 2wk1_A 257 EYRAKFDIADELITIDRDGVYWQRT 281 (282)
T ss_dssp HHHHHTTCCSCCEECSSSCEEEECC
T ss_pred HHHHhcCCceEEEEecCEEEEEEeC
Confidence 5666666543 3333335566664
No 291
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=96.86 E-value=0.018 Score=56.10 Aligned_cols=99 Identities=17% Similarity=0.238 Sum_probs=62.1
Q ss_pred CEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHcCCC-eEEEEe-cCCCCCCCCCCceEEEeccccc
Q 012961 217 RNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIP-STLGVL-GTKRLPYPSRSFELAHCSRCRI 290 (452)
Q Consensus 217 ~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg~~-~~~~~~-d~~~lp~~d~sFDlVv~s~~~l 290 (452)
.+||||||++|.|+.+.+.. .|.++|+-.....+.+. .+..+-+ +.+... |+..++. ..+|+|+|-..
T Consensus 96 ~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~--~~ql~w~lV~~~~~~Dv~~l~~--~~~D~ivcDig-- 169 (321)
T 3lkz_A 96 GKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQL--VQSYGWNIVTMKSGVDVFYRPS--ECCDTLLCDIG-- 169 (321)
T ss_dssp EEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCC--CCBTTGGGEEEECSCCTTSSCC--CCCSEEEECCC--
T ss_pred CEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcch--hhhcCCcceEEEeccCHhhCCC--CCCCEEEEECc--
Confidence 38999999999999988763 57788887653321100 0011111 445544 5555553 56999998653
Q ss_pred cccccH----H---HHHHHHHHhcCCC-cEEEEEeCCCC
Q 012961 291 DWLQRD----G---ILLLELDRLLRPG-GYFVYSSPEAY 321 (452)
Q Consensus 291 ~~~~d~----~---~~L~ei~RvLkPG-G~lvi~~p~~~ 321 (452)
+-.+++ . .+|+-+.+.|++| |-|++-....|
T Consensus 170 eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~pY 208 (321)
T 3lkz_A 170 ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCPY 208 (321)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTT
T ss_pred cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCCC
Confidence 222222 1 1566667889999 99998776655
No 292
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=96.80 E-value=0.0016 Score=65.88 Aligned_cols=119 Identities=9% Similarity=0.009 Sum_probs=72.6
Q ss_pred CCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcC-------------CCeEEEEecCCCC----CCCCC
Q 012961 216 IRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERG-------------IPSTLGVLGTKRL----PYPSR 278 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg-------------~~~~~~~~d~~~l----p~~d~ 278 (452)
+++||=||-|.|..+..+++.... .+.-.++.+..++.+++.. .++.+.+.|.... .-..+
T Consensus 206 pkrVLIIGgGdG~~~revlkh~~~--~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 206 GKDVLILGGGDGGILCEIVKLKPK--MVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp TCEEEEEECTTCHHHHHHHTTCCS--EEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCeEEEECCCcHHHHHHHHhcCCc--eeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 568999999999999999875332 2333355566667776531 2356777775332 11246
Q ss_pred CceEEEecccccccccc---------HHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhC
Q 012961 279 SFELAHCSRCRIDWLQR---------DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSM 341 (452)
Q Consensus 279 sFDlVv~s~~~l~~~~d---------~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~ 341 (452)
.||+|+.-..-.....+ ...+++.+.++|+|||+++......+. . +....+.+.+++.
T Consensus 284 ~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~~--~---~~~~~i~~tl~~v 350 (381)
T 3c6k_A 284 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVNL--T---EALSLYEEQLGRL 350 (381)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTC--H---HHHHHHHHHHTTS
T ss_pred ceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecCCCcc--h---hHHHHHHHHHHHh
Confidence 79999864210000011 145788999999999999986533331 1 2234555666665
No 293
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=96.76 E-value=0.0078 Score=63.68 Aligned_cols=118 Identities=14% Similarity=0.126 Sum_probs=71.9
Q ss_pred HHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhh-----------------CCCccccCChhhhhHHHHHHH
Q 012961 194 KYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLS-----------------HDIIAMSLAPNDVHENQIQFA 256 (452)
Q Consensus 194 ~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~-----------------~~v~~vdis~~dis~~~~~~A 256 (452)
..++.+.+++.. ....+|+|-.||+|.|.....+ ..+.|+|+.+....-+..+..
T Consensus 204 ~Vv~lmv~l~~p--------~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~ 275 (530)
T 3ufb_A 204 PVVRFMVEVMDP--------QLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLL 275 (530)
T ss_dssp HHHHHHHHHHCC--------CTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcc--------CCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHH
Confidence 456666676653 2345799999999999876543 235566665555444433333
Q ss_pred HHcCCCeEEEEecCCCCCC----CCCCceEEEecccccc--c-------------ccc-HHHHHHHHHHhcC-------C
Q 012961 257 LERGIPSTLGVLGTKRLPY----PSRSFELAHCSRCRID--W-------------LQR-DGILLLELDRLLR-------P 309 (452)
Q Consensus 257 ~~rg~~~~~~~~d~~~lp~----~d~sFDlVv~s~~~l~--~-------------~~d-~~~~L~ei~RvLk-------P 309 (452)
........+...|....|. +...||+|+++-- +. + ..+ .-.++..+.+.|| +
T Consensus 276 lhg~~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPP-f~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~ 354 (530)
T 3ufb_A 276 LHGLEYPRIDPENSLRFPLREMGDKDRVDVILTNPP-FGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDN 354 (530)
T ss_dssp HHTCSCCEEECSCTTCSCGGGCCGGGCBSEEEECCC-SSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSS
T ss_pred hcCCccccccccccccCchhhhcccccceEEEecCC-CCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCC
Confidence 3322235667777655443 2357999998631 10 0 001 1236788888887 7
Q ss_pred CcEEEEEeCCC
Q 012961 310 GGYFVYSSPEA 320 (452)
Q Consensus 310 GG~lvi~~p~~ 320 (452)
||++.++.|..
T Consensus 355 gGr~avVlP~g 365 (530)
T 3ufb_A 355 GGRAAVVVPNG 365 (530)
T ss_dssp CCEEEEEEEHH
T ss_pred CceEEEEecch
Confidence 99999999864
No 294
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=96.61 E-value=0.00066 Score=68.43 Aligned_cols=105 Identities=16% Similarity=0.120 Sum_probs=65.0
Q ss_pred CCCEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHcC-------CCeEEEEecCCCCC-CCCCCceE
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERG-------IPSTLGVLGTKRLP-YPSRSFEL 282 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg-------~~~~~~~~d~~~lp-~~d~sFDl 282 (452)
++.+|||+.+|.|.=+..|++. .|+++|++..-+.... +.++..+ .++.+...|...++ ...+.||.
T Consensus 148 pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~-~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD~ 226 (359)
T 4fzv_A 148 PGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQ-KILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDR 226 (359)
T ss_dssp TTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHH-HHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEEE
T ss_pred CCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHH-HHHHHhhhhhhccCCceEEEeCchhhcchhccccCCE
Confidence 4558999999999988888763 3556665544332221 2222222 34667777766653 34478999
Q ss_pred EEe----ccc---ccc------c--ccc--------HHHHHHHHHHhcCCCcEEEEEeCCC
Q 012961 283 AHC----SRC---RID------W--LQR--------DGILLLELDRLLRPGGYFVYSSPEA 320 (452)
Q Consensus 283 Vv~----s~~---~l~------~--~~d--------~~~~L~ei~RvLkPGG~lvi~~p~~ 320 (452)
|++ +.. ++. | ... ...+|....+.|||||+|+.++=..
T Consensus 227 VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl 287 (359)
T 4fzv_A 227 VLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSL 287 (359)
T ss_dssp EEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred EEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCC
Confidence 995 221 111 1 000 1347888999999999999987544
No 295
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=96.37 E-value=0.059 Score=50.89 Aligned_cols=98 Identities=16% Similarity=0.179 Sum_probs=62.7
Q ss_pred CEEEEECCCCchHHHHHhhC----CCccccCChhhhhHHHHHHHHHcC-CCeEEEEe-cCCCCCCCCCCceEEEeccccc
Q 012961 217 RNVLDVGCGVASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERG-IPSTLGVL-GTKRLPYPSRSFELAHCSRCRI 290 (452)
Q Consensus 217 ~~VLDIGCG~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg-~~~~~~~~-d~~~lp~~d~sFDlVv~s~~~l 290 (452)
.+|||+||++|.++.+.+.. .|.++|+-+....+.+. .+..| ..+.|... |...++- ..+|.|+|-..-
T Consensus 80 ~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~--~~s~gwn~v~fk~gvDv~~~~~--~~~DtllcDIge- 154 (267)
T 3p8z_A 80 GRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVP--MSTYGWNIVKLMSGKDVFYLPP--EKCDTLLCDIGE- 154 (267)
T ss_dssp EEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCC--CCCTTTTSEEEECSCCGGGCCC--CCCSEEEECCCC-
T ss_pred CEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcch--hhhcCcCceEEEeccceeecCC--ccccEEEEecCC-
Confidence 48999999999999988763 57788887765422110 01112 23566666 6555542 669999996521
Q ss_pred cccccH----H---HHHHHHHHhcCCCcEEEEEeCCCC
Q 012961 291 DWLQRD----G---ILLLELDRLLRPGGYFVYSSPEAY 321 (452)
Q Consensus 291 ~~~~d~----~---~~L~ei~RvLkPGG~lvi~~p~~~ 321 (452)
-.+++ . .+|+-+.+.|++ |-|++-....|
T Consensus 155 -Ss~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py 190 (267)
T 3p8z_A 155 -SSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPY 190 (267)
T ss_dssp -CCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCC
T ss_pred -CCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCC
Confidence 11221 1 156666788998 78888765554
No 296
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.57 E-value=0.02 Score=55.67 Aligned_cols=94 Identities=20% Similarity=0.243 Sum_probs=58.2
Q ss_pred CeEEEEecCCC-CC-CCCCCceEEEeccccc---c----------------ccccHHHHHHHHHHhcCCCcEEEEEeCCC
Q 012961 262 PSTLGVLGTKR-LP-YPSRSFELAHCSRCRI---D----------------WLQRDGILLLELDRLLRPGGYFVYSSPEA 320 (452)
Q Consensus 262 ~~~~~~~d~~~-lp-~~d~sFDlVv~s~~~l---~----------------~~~d~~~~L~ei~RvLkPGG~lvi~~p~~ 320 (452)
.+.+..+|..+ +. +++++||+|+++--.. . |......++.++.|+|||||.+++.....
T Consensus 21 ~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d~ 100 (297)
T 2zig_A 21 VHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGDV 100 (297)
T ss_dssp CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCE
T ss_pred CCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECCC
Confidence 35677888654 32 4678999999863211 0 11122457889999999999999876543
Q ss_pred CCC-Chhh----HHHHHHHHHHHHhCCCEEEEEEeceeEeeccc
Q 012961 321 YAH-DPEN----RRIWNAMYDLLKSMCWKIVSKKDQTVIWAKPI 359 (452)
Q Consensus 321 ~~~-~~~~----~~~~~~l~~ll~~~Gf~~v~~~~~~~iw~kp~ 359 (452)
... .... ......+..++++.||.... ..+|.|+.
T Consensus 101 ~~~~~~~g~~~~~~~~~~l~~~~~~~Gf~~~~----~iiW~K~~ 140 (297)
T 2zig_A 101 AVARRRFGRHLVFPLHADIQVRCRKLGFDNLN----PIIWHKHT 140 (297)
T ss_dssp EEECC----EEEECHHHHHHHHHHHTTCEEEE----EEEEECC-
T ss_pred ccccccCCcccccccHHHHHHHHHHcCCeeec----cEEEeCCC
Confidence 210 0000 11235677888999997653 45899874
No 297
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=95.18 E-value=0.0059 Score=75.56 Aligned_cols=98 Identities=16% Similarity=0.240 Sum_probs=39.3
Q ss_pred CCEEEEECCCCchHHHHHhhC---------CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCC-CCCCCCceEEEe
Q 012961 216 IRNVLDVGCGVASFGAYLLSH---------DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRL-PYPSRSFELAHC 285 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~---------~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~l-p~~d~sFDlVv~ 285 (452)
..+|||||.|+|..+..+.+. .++..|+++.....++.++.. ..+.....|.... ++..++||+|++
T Consensus 1241 ~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~---~di~~~~~d~~~~~~~~~~~ydlvia 1317 (2512)
T 2vz8_A 1241 KMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQ---LHVTQGQWDPANPAPGSLGKADLLVC 1317 (2512)
T ss_dssp EEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHH---HTEEEECCCSSCCCC-----CCEEEE
T ss_pred CceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhh---cccccccccccccccCCCCceeEEEE
Confidence 458999999999765554321 122234443322222212211 1222222233222 344567999998
Q ss_pred ccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 286 SRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 286 s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
++ ++|-..+....|.++.++|||||++++..
T Consensus 1318 ~~-vl~~t~~~~~~l~~~~~lL~p~G~l~~~e 1348 (2512)
T 2vz8_A 1318 NC-ALATLGDPAVAVGNMAATLKEGGFLLLHT 1348 (2512)
T ss_dssp EC-C--------------------CCEEEEEE
T ss_pred cc-cccccccHHHHHHHHHHhcCCCcEEEEEe
Confidence 88 67777788889999999999999998865
No 298
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.87 E-value=0.038 Score=54.46 Aligned_cols=95 Identities=15% Similarity=0.254 Sum_probs=59.8
Q ss_pred CeEEEEecCCC-CC-CCCCCceEEEecccc-------------ccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCCh-
Q 012961 262 PSTLGVLGTKR-LP-YPSRSFELAHCSRCR-------------IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDP- 325 (452)
Q Consensus 262 ~~~~~~~d~~~-lp-~~d~sFDlVv~s~~~-------------l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~- 325 (452)
...+..+|... +. +++++||+|++.--. -+|.......+.++.|+|+|||.+++.....+....
T Consensus 14 ~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~~~~g~~ 93 (323)
T 1boo_A 14 NGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGAYMKGVP 93 (323)
T ss_dssp SEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCEETTEE
T ss_pred CceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCEecCCCc
Confidence 35667777543 32 457889999986310 012223466899999999999999997654321110
Q ss_pred -hhHHHHHHHHHHHHhCCCEEEEEEeceeEeecccc
Q 012961 326 -ENRRIWNAMYDLLKSMCWKIVSKKDQTVIWAKPIS 360 (452)
Q Consensus 326 -~~~~~~~~l~~ll~~~Gf~~v~~~~~~~iw~kp~~ 360 (452)
.....+..+.++++..||..+. ..+|+|+..
T Consensus 94 ~~~~~~~~~i~~~~~~~Gf~~~~----~iiW~k~~~ 125 (323)
T 1boo_A 94 ARSIYNFRVLIRMIDEVGFFLAE----DFYWFNPSK 125 (323)
T ss_dssp EECCHHHHHHHHHHHTTCCEEEE----EEEEECSSC
T ss_pred ccccchHHHHHHHHHhCCCEEEE----EEEEecCCC
Confidence 0112355666778999997653 458987654
No 299
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=94.86 E-value=0.084 Score=51.41 Aligned_cols=130 Identities=12% Similarity=0.042 Sum_probs=74.1
Q ss_pred HHHHHHHHHHHhcCCCCccCCCCCCCEEEEECC------CCchHHHH-HhhC--CCccccCChhhhhHHHHHHHHHcCCC
Q 012961 192 ADKYILALARMLKFPSDKLNNGGNIRNVLDVGC------GVASFGAY-LLSH--DIIAMSLAPNDVHENQIQFALERGIP 262 (452)
Q Consensus 192 ~~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGC------G~G~~~~~-La~~--~v~~vdis~~dis~~~~~~A~~rg~~ 262 (452)
..+|.+ +-+.+.......+.+ .+|||+|+ -.|++... +... .|+++|+.+... ..+
T Consensus 90 v~kytq-lcqyl~~~~~~vp~g---mrVLDLGA~s~kg~APGS~VLr~~~p~g~~VVavDL~~~~s-----------da~ 154 (344)
T 3r24_A 90 VAKYTQ-LCQYLNTLTLAVPYN---MRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDFVS-----------DAD 154 (344)
T ss_dssp HHHHHH-HHHHHTTSCCCCCTT---CEEEEESCCCTTSBCHHHHHHHHHSCTTCEEEEEESSCCBC-----------SSS
T ss_pred HHHHHH-HHHHhccccEeecCC---CEEEeCCCCCCCCCCCcHHHHHHhCCCCcEEEEeeCccccc-----------CCC
Confidence 455554 344554333334444 48999996 56764322 2222 567788776542 112
Q ss_pred eEEEEecCCCCCCCCCCceEEEeccccccc-----ccc------HHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHH
Q 012961 263 STLGVLGTKRLPYPSRSFELAHCSRCRIDW-----LQR------DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIW 331 (452)
Q Consensus 263 ~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~-----~~d------~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~ 331 (452)
.++++|...+.. .+.||+|+|-.+ -.- .+. .+.++.-+.++|+|||.|++-....-. .
T Consensus 155 -~~IqGD~~~~~~-~~k~DLVISDMA-PNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg--------~ 223 (344)
T 3r24_A 155 -STLIGDCATVHT-ANKWDLIISDMY-DPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW--------N 223 (344)
T ss_dssp -EEEESCGGGEEE-SSCEEEEEECCC-CTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC--------C
T ss_pred -eEEEcccccccc-CCCCCEEEecCC-CCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCC--------H
Confidence 457788654433 378999998321 110 011 245777788899999999997644321 1
Q ss_pred HHHHHHHHhCCCEEEEEE
Q 012961 332 NAMYDLLKSMCWKIVSKK 349 (452)
Q Consensus 332 ~~l~~ll~~~Gf~~v~~~ 349 (452)
+.+.++.+ .|+.++..
T Consensus 224 ~~L~~lrk--~F~~VK~f 239 (344)
T 3r24_A 224 ADLYKLMG--HFSWWTAF 239 (344)
T ss_dssp HHHHHHHT--TEEEEEEE
T ss_pred HHHHHHHh--hCCeEEEE
Confidence 23444443 78777655
No 300
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=94.78 E-value=0.11 Score=50.99 Aligned_cols=74 Identities=11% Similarity=0.105 Sum_probs=49.1
Q ss_pred eEEEEecCCC-CC-CCCCCceEEEeccccccccccH----HHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHH
Q 012961 263 STLGVLGTKR-LP-YPSRSFELAHCSRCRIDWLQRD----GILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYD 336 (452)
Q Consensus 263 ~~~~~~d~~~-lp-~~d~sFDlVv~s~~~l~~~~d~----~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ 336 (452)
..+..+|+.. ++ +++..||+|+.-. +.-..++ ..+++.++++++|||.|+--+ .. ..+++
T Consensus 168 L~l~~GDa~~~l~~l~~~~~Da~flDg--FsP~kNPeLWs~e~f~~l~~~~~pgg~laTYt-----aa-------g~VRR 233 (308)
T 3vyw_A 168 LKVLLGDARKRIKEVENFKADAVFHDA--FSPYKNPELWTLDFLSLIKERIDEKGYWVSYS-----SS-------LSVRK 233 (308)
T ss_dssp EEEEESCHHHHGGGCCSCCEEEEEECC--SCTTTSGGGGSHHHHHHHHTTEEEEEEEEESC-----CC-------HHHHH
T ss_pred EEEEechHHHHHhhhcccceeEEEeCC--CCcccCcccCCHHHHHHHHHHhCCCcEEEEEe-----Cc-------HHHHH
Confidence 3556677533 32 3445799998532 2112222 569999999999999998421 11 35788
Q ss_pred HHHhCCCEEEEEEe
Q 012961 337 LLKSMCWKIVSKKD 350 (452)
Q Consensus 337 ll~~~Gf~~v~~~~ 350 (452)
-++++||.+.+...
T Consensus 234 ~L~~aGF~V~k~~G 247 (308)
T 3vyw_A 234 SLLTLGFKVGSSRE 247 (308)
T ss_dssp HHHHTTCEEEEEEC
T ss_pred HHHHCCCEEEecCC
Confidence 89999999877654
No 301
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=94.45 E-value=0.066 Score=51.98 Aligned_cols=51 Identities=18% Similarity=0.063 Sum_probs=34.6
Q ss_pred HHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhh--CCCccccCChhhhhHHH
Q 012961 193 DKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLS--HDIIAMSLAPNDVHENQ 252 (452)
Q Consensus 193 ~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~--~~v~~vdis~~dis~~~ 252 (452)
....+.+.+... .+...|||++||+|..+..++. +.++++|+++..+..+.
T Consensus 222 ~~l~~~~i~~~~---------~~~~~vlD~f~GsGt~~~~a~~~g~~~~g~e~~~~~~~~a~ 274 (297)
T 2zig_A 222 LELAERLVRMFS---------FVGDVVLDPFAGTGTTLIAAARWGRRALGVELVPRYAQLAK 274 (297)
T ss_dssp HHHHHHHHHHHC---------CTTCEEEETTCTTTHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHhC---------CCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHH
Confidence 445555555543 1345899999999999988876 46777777766554443
No 302
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=94.26 E-value=0.07 Score=51.73 Aligned_cols=66 Identities=15% Similarity=0.015 Sum_probs=45.5
Q ss_pred CCEEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHc-CCCeEEEEecCCCCC-----CCCCCceEEEec
Q 012961 216 IRNVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALER-GIPSTLGVLGTKRLP-----YPSRSFELAHCS 286 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~r-g~~~~~~~~d~~~lp-----~~d~sFDlVv~s 286 (452)
...+||.+||.|..+..|+++ .|+++|.++..+ +.|++. ..++.++..+...++ ...++||.|++.
T Consensus 23 gg~~VD~T~G~GGHS~~il~~~g~VigiD~Dp~Ai-----~~A~~L~~~rv~lv~~~f~~l~~~L~~~g~~~vDgIL~D 96 (285)
T 1wg8_A 23 GGVYVDATLGGAGHARGILERGGRVIGLDQDPEAV-----ARAKGLHLPGLTVVQGNFRHLKRHLAALGVERVDGILAD 96 (285)
T ss_dssp TCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHH-----HHHHHTCCTTEEEEESCGGGHHHHHHHTTCSCEEEEEEE
T ss_pred CCEEEEeCCCCcHHHHHHHHCCCEEEEEeCCHHHH-----HHHHhhccCCEEEEECCcchHHHHHHHcCCCCcCEEEeC
Confidence 448999999999999999985 466666555444 444441 136788888876653 122579999863
No 303
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=92.26 E-value=0.28 Score=48.62 Aligned_cols=126 Identities=13% Similarity=0.057 Sum_probs=69.8
Q ss_pred EEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCC---CCCCceEEEeccccccc--
Q 012961 218 NVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPY---PSRSFELAHCSRCRIDW-- 292 (452)
Q Consensus 218 ~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~---~d~sFDlVv~s~~~l~~-- 292 (452)
+|||+-||.|.++..+....+..--+...|+.+.+++..+.+.....+...|+..+.. +...+|+|+...---.|
T Consensus 4 ~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~~~~~~~Di~~~~~~~~~~~~~D~l~~gpPCq~fS~ 83 (343)
T 1g55_A 4 RVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPFTR 83 (343)
T ss_dssp EEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECSCGGGCCHHHHHHHCCSEEEECCC------
T ss_pred eEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccccccccCCHHHccHhHcCcCCcCEEEEcCCCcchhh
Confidence 7999999999999888764311011233355556666666655555566778776642 11258999875310111
Q ss_pred ------cccHH-HHHHHHHHh---cC--CCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEE
Q 012961 293 ------LQRDG-ILLLELDRL---LR--PGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSK 348 (452)
Q Consensus 293 ------~~d~~-~~L~ei~Rv---Lk--PGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~ 348 (452)
..|.. .++.++.|+ ++ |.-.++=-++... ....+..+.+.++++||.+...
T Consensus 84 ag~~~g~~d~r~~l~~~~~~~i~~~~~~P~~~~~ENV~~l~-----~~~~~~~i~~~l~~~GY~v~~~ 146 (343)
T 1g55_A 84 IGRQGDMTDSRTNSFLHILDILPRLQKLPKYILLENVKGFE-----VSSTRDLLIQTIENCGFQYQEF 146 (343)
T ss_dssp ------------CHHHHHHHHGGGCSSCCSEEEEEEETTGG-----GSHHHHHHHHHHHHTTEEEEEE
T ss_pred cCCcCCccCccchHHHHHHHHHHHhcCCCCEEEEeCCcccc-----CHHHHHHHHHHHHHCCCeeEEE
Confidence 11221 244444444 45 6533331122211 1245778888899999987543
No 304
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=91.05 E-value=1.4 Score=44.17 Aligned_cols=120 Identities=16% Similarity=0.073 Sum_probs=71.1
Q ss_pred EEEEECCCCchHHHHHhhCC---CccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCC--------CCCCceEEEec
Q 012961 218 NVLDVGCGVASFGAYLLSHD---IIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPY--------PSRSFELAHCS 286 (452)
Q Consensus 218 ~VLDIGCG~G~~~~~La~~~---v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~--------~d~sFDlVv~s 286 (452)
++||+-||.|.++..+.++. +.++ |+++.+++..+.+.....+...|+.++.. ....+|+|+..
T Consensus 4 ~vidLFsG~GGlslG~~~aG~~~v~av-----E~d~~a~~t~~~N~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~gg 78 (376)
T 3g7u_A 4 NVIDLFSGVGGLSLGAARAGFDVKMAV-----EIDQHAINTHAINFPRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGG 78 (376)
T ss_dssp EEEEETCTTSHHHHHHHHHTCEEEEEE-----CSCHHHHHHHHHHCTTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEEC
T ss_pred eEEEEccCcCHHHHHHHHCCCcEEEEE-----eCCHHHHHHHHHhCCCCceEecChhhcCHHHHHhhcccCCCeeEEEec
Confidence 79999999999998887642 2344 44455555555555566777788776631 23579999864
Q ss_pred cccccc-------cccH-HHHHH---HHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEE
Q 012961 287 RCRIDW-------LQRD-GILLL---ELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKI 345 (452)
Q Consensus 287 ~~~l~~-------~~d~-~~~L~---ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~ 345 (452)
.---.| ..|. ..++. ++.+.++|.-.++=-++.... ......++.+. .++++||.+
T Consensus 79 pPCQ~fS~ag~~~~~d~r~~L~~~~~~~v~~~~P~~~v~ENV~gl~s--~~~~~~~~~i~-~l~~~GY~v 145 (376)
T 3g7u_A 79 PPCQGFSSIGKGNPDDSRNQLYMHFYRLVSELQPLFFLAENVPGIMQ--EKYSGIRNKAF-NLVSGDYDI 145 (376)
T ss_dssp CCCCTTC-------CHHHHHHHHHHHHHHHHHCCSEEEEEECTTTTC--GGGHHHHHHHH-HHHHTTEEE
T ss_pred CCCCCcccccCCCCCCchHHHHHHHHHHHHHhCCCEEEEecchHhhc--cCcHHHHHHHH-HHHcCCCcc
Confidence 310111 1222 22333 444556885444433333321 22334677888 899999987
No 305
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=89.02 E-value=0.63 Score=43.97 Aligned_cols=50 Identities=12% Similarity=-0.016 Sum_probs=35.3
Q ss_pred HHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEEEeceeEeeccc
Q 012961 297 GILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKDQTVIWAKPI 359 (452)
Q Consensus 297 ~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~~~~iw~kp~ 359 (452)
...+.++.|+|+|||.+++.... .....+..++.+.||.... ..+|+|+.
T Consensus 54 ~~~l~~~~~~Lk~~g~i~v~~~d---------~~~~~~~~~~~~~gf~~~~----~iiW~K~~ 103 (260)
T 1g60_A 54 YRWIDKVLDKLDKDGSLYIFNTP---------FNCAFICQYLVSKGMIFQN----WITWDKRD 103 (260)
T ss_dssp HHHHHHHHHHEEEEEEEEEEECH---------HHHHHHHHHHHHTTCEEEE----EEEECCCC
T ss_pred HHHHHHHHHHhcCCeEEEEEcCc---------HHHHHHHHHHHhhccceeE----EEEEEecC
Confidence 55888999999999999986411 0123455677888996543 46898874
No 306
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=87.88 E-value=0.88 Score=49.18 Aligned_cols=61 Identities=15% Similarity=0.162 Sum_probs=40.4
Q ss_pred CCCceEEEecccccccccc--HHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEEE
Q 012961 277 SRSFELAHCSRCRIDWLQR--DGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 349 (452)
Q Consensus 277 d~sFDlVv~s~~~l~~~~d--~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~ 349 (452)
+..||+++.-.-.-...++ ...++..+.++++|||.+.-..-. ..+++.+.++||.+....
T Consensus 169 ~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~~~------------~~vr~~l~~aGf~~~~~~ 231 (689)
T 3pvc_A 169 NNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTFTAA------------GFVRRGLQQAGFNVTKVK 231 (689)
T ss_dssp TTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEESCCC------------HHHHHHHHHTTCEEEEEE
T ss_pred CCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEeccCc------------HHHHHHHHhCCeEEEecc
Confidence 4679999863211111111 156999999999999987742211 357888999999887654
No 307
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=86.09 E-value=2.7 Score=41.36 Aligned_cols=128 Identities=14% Similarity=0.146 Sum_probs=70.3
Q ss_pred CCEEEEECCCCchHHHHHhhCCCccccC-ChhhhhHHHHHHHHHcCCCeEEEEecCCCCCC---CCCCceEEEecccccc
Q 012961 216 IRNVLDVGCGVASFGAYLLSHDIIAMSL-APNDVHENQIQFALERGIPSTLGVLGTKRLPY---PSRSFELAHCSRCRID 291 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~~v~~vdi-s~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~---~d~sFDlVv~s~~~l~ 291 (452)
.-+++|+-||.|.++..+....+..--+ ...|+.+.+.+.-+.+.... +...|+..+.. +...+|+++.+.---.
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~-~~~~DI~~~~~~~i~~~~~Dil~ggpPCQ~ 88 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE-VQVKNLDSISIKQIESLNCNTWFMSPPCQP 88 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC-CBCCCTTTCCHHHHHHTCCCEEEECCCCTT
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC-cccCChhhcCHHHhccCCCCEEEecCCccC
Confidence 3479999999999998887753200011 23344444444443332222 45567666642 2236899986432111
Q ss_pred c----------cccH-HHHHHHHHH-hc-----CCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEEE
Q 012961 292 W----------LQRD-GILLLELDR-LL-----RPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 349 (452)
Q Consensus 292 ~----------~~d~-~~~L~ei~R-vL-----kPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~ 349 (452)
| ..|. ..++.++.| ++ +|. ++++.--.... ....++.+.+.++++||.+....
T Consensus 89 fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~-~~~lENV~gl~----~~~~~~~i~~~l~~~GY~v~~~v 158 (327)
T 3qv2_A 89 YNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPK-HIFIENVPLFK----ESLVFKEIYNILIKNQYYIKDII 158 (327)
T ss_dssp CSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCS-EEEEEECGGGG----GSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cccccCCCCCCCccccchhHHHHHHHHHHHhccCCC-EEEEEchhhhc----ChHHHHHHHHHHHhCCCEEEEEE
Confidence 2 1233 346777777 55 453 33332221111 12457888899999999875443
No 308
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=85.53 E-value=3 Score=41.06 Aligned_cols=100 Identities=14% Similarity=0.182 Sum_probs=58.2
Q ss_pred CCEEEEECCCCchHHHHHhh--CCCccccCChhhhhHHHHHHHHHc----------------------CCCeEEEEecCC
Q 012961 216 IRNVLDVGCGVASFGAYLLS--HDIIAMSLAPNDVHENQIQFALER----------------------GIPSTLGVLGTK 271 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~--~~v~~vdis~~dis~~~~~~A~~r----------------------g~~~~~~~~d~~ 271 (452)
...|+.+|||..+....|.. ..+.-++++-.++-....+...+. ..+..++-+|+.
T Consensus 98 ~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~DL~ 177 (334)
T 1rjd_A 98 KVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACDLN 177 (334)
T ss_dssp SEEEEEETCTTCCTHHHHHHHCTTEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECCTT
T ss_pred CcEEEEeCCCCccHHHHhcCcCCCCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecCCC
Confidence 45899999999999888875 333333333222222222222221 134566777765
Q ss_pred CCCC---------CCCCceEEEeccccccccccH--HHHHHHHHHhcCCCcEEEEEe
Q 012961 272 RLPY---------PSRSFELAHCSRCRIDWLQRD--GILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 272 ~lp~---------~d~sFDlVv~s~~~l~~~~d~--~~~L~ei~RvLkPGG~lvi~~ 317 (452)
+... ......+++ +.+++.|++.. ..+++.+...+ |+|.+++.+
T Consensus 178 d~~w~~~ll~~~~d~~~Ptl~i-aEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e 232 (334)
T 1rjd_A 178 DITETTRLLDVCTKREIPTIVI-SECLLCYMHNNESQLLINTIMSKF-SHGLWISYD 232 (334)
T ss_dssp CHHHHHHHHHTTCCTTSCEEEE-EESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEE
T ss_pred CcHHHHHHHHhcCCCCCCEEEE-EcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEe
Confidence 5321 223455665 56688887554 55888888877 778776543
No 309
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=85.46 E-value=1.3 Score=47.70 Aligned_cols=59 Identities=15% Similarity=0.190 Sum_probs=40.6
Q ss_pred CCCceEEEeccccccccccH----HHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEEE
Q 012961 277 SRSFELAHCSRCRIDWLQRD----GILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKK 349 (452)
Q Consensus 277 d~sFDlVv~s~~~l~~~~d~----~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~ 349 (452)
...||+++.-. +.-..++ ..++..+.++++|||.+.-..-. ..+++.+.++||.+....
T Consensus 177 ~~~~d~~~~D~--f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~~~------------~~vr~~L~~aGf~v~~~~ 239 (676)
T 3ps9_A 177 NQKVDAWFLDG--FAPAKNPDMWTQNLFNAMARLARPGGTLATFTSA------------GFVRRGLQDAGFTMQKRK 239 (676)
T ss_dssp TTCEEEEEECC--SCGGGCGGGSCHHHHHHHHHHEEEEEEEEESCCC------------HHHHHHHHHHTCEEEEEE
T ss_pred CCcccEEEECC--CCCcCChhhhhHHHHHHHHHHhCCCCEEEeccCc------------HHHHHHHHhCCeEEEecc
Confidence 36799998532 1111122 56999999999999998752211 357788899999887644
No 310
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=85.16 E-value=0.79 Score=44.95 Aligned_cols=90 Identities=16% Similarity=0.082 Sum_probs=54.9
Q ss_pred CCCEEEEECCCC-chHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEecccccccc
Q 012961 215 NIRNVLDVGCGV-ASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL 293 (452)
Q Consensus 215 ~~~~VLDIGCG~-G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~ 293 (452)
++.+||-+|+|. |.++..+++. .+..+...+.++...+.+++.|....+ .+...+ . ..+|+|+-....-
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla~~--~Ga~Vi~~~~~~~~~~~~~~lGa~~v~--~~~~~~--~-~~~D~vid~~g~~--- 245 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYAVA--MGAEVSVFARNEHKKQDALSMGVKHFY--TDPKQC--K-EELDFIISTIPTH--- 245 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHH--TTCEEEEECSSSTTHHHHHHTTCSEEE--SSGGGC--C-SCEEEEEECCCSC---
T ss_pred CCCEEEEECCcHHHHHHHHHHHH--CCCeEEEEeCCHHHHHHHHhcCCCeec--CCHHHH--h-cCCCEEEECCCcH---
Confidence 445899999864 6666666652 122333334444555677777755433 333322 2 2799998543211
Q ss_pred ccHHHHHHHHHHhcCCCcEEEEEeC
Q 012961 294 QRDGILLLELDRLLRPGGYFVYSSP 318 (452)
Q Consensus 294 ~d~~~~L~ei~RvLkPGG~lvi~~p 318 (452)
..+....++|++||.+++...
T Consensus 246 ----~~~~~~~~~l~~~G~iv~~G~ 266 (348)
T 3two_A 246 ----YDLKDYLKLLTYNGDLALVGL 266 (348)
T ss_dssp ----CCHHHHHTTEEEEEEEEECCC
T ss_pred ----HHHHHHHHHHhcCCEEEEECC
Confidence 247788899999999998653
No 311
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=84.95 E-value=1.1 Score=44.86 Aligned_cols=98 Identities=12% Similarity=0.053 Sum_probs=56.9
Q ss_pred CCCEEEEECCCC-chHHHHHhhCCCccc-cCChhhhhHHHHHHHHHcCCCeEEEEecCCCC-C-----C-CCCCceEEEe
Q 012961 215 NIRNVLDVGCGV-ASFGAYLLSHDIIAM-SLAPNDVHENQIQFALERGIPSTLGVLGTKRL-P-----Y-PSRSFELAHC 285 (452)
Q Consensus 215 ~~~~VLDIGCG~-G~~~~~La~~~v~~v-dis~~dis~~~~~~A~~rg~~~~~~~~d~~~l-p-----~-~d~sFDlVv~ 285 (452)
+..+||-+|+|. |.++..+++. .+. .+...+.++..++.+++.|. .++.....++ . . ....||+|+-
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlak~--~Ga~~Vi~~~~~~~~~~~a~~lGa--~~i~~~~~~~~~~~~~~~~~g~g~Dvvid 260 (398)
T 2dph_A 185 PGSHVYIAGAGPVGRCAAAGARL--LGAACVIVGDQNPERLKLLSDAGF--ETIDLRNSAPLRDQIDQILGKPEVDCGVD 260 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH--HTCSEEEEEESCHHHHHHHHTTTC--EEEETTSSSCHHHHHHHHHSSSCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--cCCCEEEEEcCCHHHHHHHHHcCC--cEEcCCCcchHHHHHHHHhCCCCCCEEEE
Confidence 345899999875 7777777652 122 33333455666677776664 3322211111 0 0 1236999985
Q ss_pred ccccccc--------cccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 286 SRCRIDW--------LQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 286 s~~~l~~--------~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
... -.. ..+....+.++.++|++||++++..
T Consensus 261 ~~g-~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G 299 (398)
T 2dph_A 261 AVG-FEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPG 299 (398)
T ss_dssp CSC-TTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCS
T ss_pred CCC-CccccccccccccccHHHHHHHHHHHhcCCEEEEec
Confidence 432 111 0012346889999999999998765
No 312
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=84.73 E-value=0.76 Score=45.50 Aligned_cols=94 Identities=13% Similarity=0.067 Sum_probs=56.1
Q ss_pred CCCEEEEECCCC-chHHHHHhhCCCccc-cCChhhhhHHHHHHHHHcCCCeEEEEecCCCC-----CCCCCCceEEEecc
Q 012961 215 NIRNVLDVGCGV-ASFGAYLLSHDIIAM-SLAPNDVHENQIQFALERGIPSTLGVLGTKRL-----PYPSRSFELAHCSR 287 (452)
Q Consensus 215 ~~~~VLDIGCG~-G~~~~~La~~~v~~v-dis~~dis~~~~~~A~~rg~~~~~~~~d~~~l-----p~~d~sFDlVv~s~ 287 (452)
+..+||-+|+|. |.++..+++. .+. .+...+.++...+.+++.|....+. ....++ ....+.||+|+-..
T Consensus 190 ~g~~VlV~GaG~vG~~a~qlak~--~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~-~~~~~~~~~~~~~~~gg~D~vid~~ 266 (371)
T 1f8f_A 190 PASSFVTWGAGAVGLSALLAAKV--CGASIIIAVDIVESRLELAKQLGATHVIN-SKTQDPVAAIKEITDGGVNFALEST 266 (371)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHH--HTCSEEEEEESCHHHHHHHHHHTCSEEEE-TTTSCHHHHHHHHTTSCEEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--cCCCeEEEECCCHHHHHHHHHcCCCEEec-CCccCHHHHHHHhcCCCCcEEEECC
Confidence 345899999875 6667676652 122 1233345566667777777543221 111111 01123699998543
Q ss_pred ccccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012961 288 CRIDWLQRDGILLLELDRLLRPGGYFVYSSP 318 (452)
Q Consensus 288 ~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p 318 (452)
. ....+.+..++|++||.+++...
T Consensus 267 g-------~~~~~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 267 G-------SPEILKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp C-------CHHHHHHHHHTEEEEEEEEECCC
T ss_pred C-------CHHHHHHHHHHHhcCCEEEEeCC
Confidence 2 12468899999999999998653
No 313
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=84.68 E-value=0.97 Score=42.65 Aligned_cols=32 Identities=16% Similarity=0.121 Sum_probs=24.1
Q ss_pred CCCEEEEECCCCchHHHHHhh--CCCccccCChh
Q 012961 215 NIRNVLDVGCGVASFGAYLLS--HDIIAMSLAPN 246 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~--~~v~~vdis~~ 246 (452)
+...|||..||+|+.+..... +.++++|+.+.
T Consensus 212 ~~~~vlD~f~GsGtt~~~a~~~gr~~ig~e~~~~ 245 (260)
T 1g60_A 212 PNDLVLDCFMGSGTTAIVAKKLGRNFIGCDMNAE 245 (260)
T ss_dssp TTCEEEESSCTTCHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHH
Confidence 345899999999998888775 45667766554
No 314
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=84.63 E-value=1.5 Score=42.86 Aligned_cols=92 Identities=18% Similarity=0.279 Sum_probs=53.2
Q ss_pred eEEE-EecCCC-C-CCCCCCceEEEecccc----------ccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHH
Q 012961 263 STLG-VLGTKR-L-PYPSRSFELAHCSRCR----------IDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRR 329 (452)
Q Consensus 263 ~~~~-~~d~~~-l-p~~d~sFDlVv~s~~~----------l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~ 329 (452)
..+. .+|... + .+++++||+|++.--- -.|.......|.++.|+|+|||.+++.....+....+ ..
T Consensus 39 ~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~~~~~~~~~-~~ 117 (319)
T 1eg2_A 39 RHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGLQYQGEAG-SG 117 (319)
T ss_dssp EEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEECSCCCCCTT-BC
T ss_pred ceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcCcccccccc-cc
Confidence 3455 666432 1 2346789999875310 0122233567889999999999999976543321100 01
Q ss_pred HHHHHHHHHHhCC-CEEEEEEeceeEeeccc
Q 012961 330 IWNAMYDLLKSMC-WKIVSKKDQTVIWAKPI 359 (452)
Q Consensus 330 ~~~~l~~ll~~~G-f~~v~~~~~~~iw~kp~ 359 (452)
....+...+...| |..+. ..+|.|+.
T Consensus 118 ~l~~l~~~i~~~G~~~~~~----~IIW~K~~ 144 (319)
T 1eg2_A 118 DLISIISHMRQNSKMLLAN----LIIWNYPN 144 (319)
T ss_dssp CHHHHHHHHHHHCCCEEEE----EEEEECSC
T ss_pred cHHHHHHHHhCcccceeEE----EEEEECCC
Confidence 1234555566667 87664 44888875
No 315
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=83.79 E-value=0.73 Score=39.60 Aligned_cols=72 Identities=17% Similarity=0.219 Sum_probs=44.3
Q ss_pred CCCCCCCceEEEeccccc-cccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEEEec
Q 012961 273 LPYPSRSFELAHCSRCRI-DWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSKKDQ 351 (452)
Q Consensus 273 lp~~d~sFDlVv~s~~~l-~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~~~~ 351 (452)
..+++++||.|+-....- ....-+..++..+.+.|||||.|.. ... -...+.++ +||.++...
T Consensus 53 VsLp~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLkpgG~L~g--------l~~----~~~~Eail--aGfvv~~~~-- 116 (136)
T 2km1_A 53 ITLENAKYETVHYLTPEAQTDIKFPKKLISVLADSLKPNGSLIG--------LSD----IYKVDALI--NGFEIINEP-- 116 (136)
T ss_dssp CCCCSSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCCTTCCEEC--------CCH----HHHHHHHH--HTEEEECSS--
T ss_pred ccCCcccccEEEEecCCccchhhcCHHHHHHHHHHhCCCCEEEe--------cCc----chhhHHHh--hccEeccCC--
Confidence 356788999998643211 1122237799999999999999985 111 12344444 489866521
Q ss_pred eeEeecccc
Q 012961 352 TVIWAKPIS 360 (452)
Q Consensus 352 ~~iw~kp~~ 360 (452)
...|.||..
T Consensus 117 ~~~~~KP~~ 125 (136)
T 2km1_A 117 DYCWIKMDS 125 (136)
T ss_dssp SCEEEEC--
T ss_pred CceeeccCc
Confidence 227999854
No 316
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=83.76 E-value=13 Score=36.00 Aligned_cols=101 Identities=16% Similarity=0.156 Sum_probs=59.3
Q ss_pred CCEEEEECCCCchHHHHHhh-C--CCccccCChhhhhHHHHHHHHHc----CCCeEEEEecCCCCCCC----CCCc----
Q 012961 216 IRNVLDVGCGVASFGAYLLS-H--DIIAMSLAPNDVHENQIQFALER----GIPSTLGVLGTKRLPYP----SRSF---- 280 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~-~--~v~~vdis~~dis~~~~~~A~~r----g~~~~~~~~d~~~lp~~----d~sF---- 280 (452)
.+.|++||||-=.....+.. . .+.-+|. +..+... .+...+. ..+..++.+|+.+ .+. ...|
T Consensus 103 ~~QvV~LGaGlDTra~Rl~~~~~~~v~evD~-P~vi~~k-~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~~ 179 (310)
T 2uyo_A 103 IRQFVILASGLDSRAYRLDWPTGTTVYEIDQ-PKVLAYK-STTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPSA 179 (310)
T ss_dssp CCEEEEETCTTCCHHHHSCCCTTCEEEEEEC-HHHHHHH-HHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTTS
T ss_pred CCeEEEeCCCCCchhhhccCCCCcEEEEcCC-HHHHHHH-HHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCCC
Confidence 35799999998887777762 2 2333442 2222211 1222221 2234566677654 211 1112
Q ss_pred eEEEeccccccccccH--HHHHHHHHHhcCCCcEEEEEeCC
Q 012961 281 ELAHCSRCRIDWLQRD--GILLLELDRLLRPGGYFVYSSPE 319 (452)
Q Consensus 281 DlVv~s~~~l~~~~d~--~~~L~ei~RvLkPGG~lvi~~p~ 319 (452)
=.++...++++|+++. ..+++.+...+.||+++++....
T Consensus 180 Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~ 220 (310)
T 2uyo_A 180 RTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSP 220 (310)
T ss_dssp CEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCC
T ss_pred CEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecC
Confidence 2455566788887654 55899999999999999987643
No 317
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=83.68 E-value=1.2 Score=43.90 Aligned_cols=95 Identities=15% Similarity=0.075 Sum_probs=56.1
Q ss_pred CCCEEEEECCCC-chHHHHHhhCCCccc-cCChhhhhHHHHHHHHHcCCCeEEEEec--CCC----C-CCCCCCceEEEe
Q 012961 215 NIRNVLDVGCGV-ASFGAYLLSHDIIAM-SLAPNDVHENQIQFALERGIPSTLGVLG--TKR----L-PYPSRSFELAHC 285 (452)
Q Consensus 215 ~~~~VLDIGCG~-G~~~~~La~~~v~~v-dis~~dis~~~~~~A~~rg~~~~~~~~d--~~~----l-p~~d~sFDlVv~ 285 (452)
+..+||-+|+|. |.++..++.. .+. .+...+.++...+.+++.|....+...+ ..+ + ....+.+|+|+-
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak~--~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~vid 248 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAKA--MGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIE 248 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH--TTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--cCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCEEEE
Confidence 345899999874 6666666653 122 3334455666667888777543222110 001 0 000146999985
Q ss_pred ccccccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012961 286 SRCRIDWLQRDGILLLELDRLLRPGGYFVYSSP 318 (452)
Q Consensus 286 s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p 318 (452)
... ....+....++|++||.+++...
T Consensus 249 ~~g-------~~~~~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 249 CTG-------AEASIQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp CSC-------CHHHHHHHHHHSCTTCEEEECSC
T ss_pred CCC-------ChHHHHHHHHHhcCCCEEEEEec
Confidence 431 12467888999999999998653
No 318
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=83.19 E-value=0.74 Score=41.05 Aligned_cols=87 Identities=15% Similarity=0.150 Sum_probs=50.3
Q ss_pred CCCEEEEECC--CCchHHHHHhh---CCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC--------CCCCCce
Q 012961 215 NIRNVLDVGC--GVASFGAYLLS---HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP--------YPSRSFE 281 (452)
Q Consensus 215 ~~~~VLDIGC--G~G~~~~~La~---~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp--------~~d~sFD 281 (452)
+..+||.+|+ |.|..+..++. ..|+++ +.++...+.+++.+.... .|..+.. ...+.+|
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~-----~~~~~~~~~~~~~g~~~~---~d~~~~~~~~~~~~~~~~~~~D 109 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTT-----AGSDAKREMLSRLGVEYV---GDSRSVDFADEILELTDGYGVD 109 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEE-----ESSHHHHHHHHTTCCSEE---EETTCSTHHHHHHHHTTTCCEE
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEE-----eCCHHHHHHHHHcCCCEE---eeCCcHHHHHHHHHHhCCCCCe
Confidence 4468999995 44555555543 234444 344444455555554322 2222111 1124699
Q ss_pred EEEeccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 282 LAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 282 lVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
+|+.+.. ...+.++.++|++||++++..
T Consensus 110 ~vi~~~g--------~~~~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 110 VVLNSLA--------GEAIQRGVQILAPGGRFIELG 137 (198)
T ss_dssp EEEECCC--------THHHHHHHHTEEEEEEEEECS
T ss_pred EEEECCc--------hHHHHHHHHHhccCCEEEEEc
Confidence 9985431 146888999999999999865
No 319
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=83.17 E-value=2.3 Score=42.39 Aligned_cols=99 Identities=14% Similarity=0.071 Sum_probs=58.3
Q ss_pred CCCEEEEECCCC-chHHHHHhhCCCccc-cCChhhhhHHHHHHHHHcCCCeEEEEecCCC-CC------CCCCCceEEEe
Q 012961 215 NIRNVLDVGCGV-ASFGAYLLSHDIIAM-SLAPNDVHENQIQFALERGIPSTLGVLGTKR-LP------YPSRSFELAHC 285 (452)
Q Consensus 215 ~~~~VLDIGCG~-G~~~~~La~~~v~~v-dis~~dis~~~~~~A~~rg~~~~~~~~d~~~-lp------~~d~sFDlVv~ 285 (452)
+..+||-+|+|. |.++..+++. .+. .+...+.++..++.+++.|.. .+.....+ +. .....+|+|+-
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlAk~--~Ga~~Vi~~~~~~~~~~~a~~lGa~--~i~~~~~~~~~~~v~~~t~g~g~Dvvid 260 (398)
T 1kol_A 185 PGSTVYVAGAGPVGLAAAASARL--LGAAVVIVGDLNPARLAHAKAQGFE--IADLSLDTPLHEQIAALLGEPEVDCAVD 260 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH--TTCSEEEEEESCHHHHHHHHHTTCE--EEETTSSSCHHHHHHHHHSSSCEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHH--CCCCeEEEEcCCHHHHHHHHHcCCc--EEccCCcchHHHHHHHHhCCCCCCEEEE
Confidence 345899999864 6677777653 122 233335566677888877753 22211111 00 01236999986
Q ss_pred ccccc--------cccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 286 SRCRI--------DWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 286 s~~~l--------~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
....- .+.+++...+.+..++|++||.+++..
T Consensus 261 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 261 AVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp CCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECS
T ss_pred CCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEec
Confidence 43211 112233457899999999999998765
No 320
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=83.14 E-value=0.74 Score=45.96 Aligned_cols=75 Identities=12% Similarity=-0.006 Sum_probs=46.1
Q ss_pred HHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhh----CCCccccCChhhhhHHHHHHHHHcCCCeEEEEec
Q 012961 194 KYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLS----HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLG 269 (452)
Q Consensus 194 ~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~----~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d 269 (452)
...+.|.+.+..... -. ......|||||.|.|.++..|++ +.+++++++...+..-. +.. ...++.++.+|
T Consensus 39 ~i~~~Iv~~~~l~~~-~~-~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~-~~~--~~~~l~ii~~D 113 (353)
T 1i4w_A 39 TVYNKIFDKLDLTKT-YK-HPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLN-AKF--EGSPLQILKRD 113 (353)
T ss_dssp HHHHHHHHHHCGGGT-CC-CTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHH-HHT--TTSSCEEECSC
T ss_pred HHHHHHHHhccCCcc-cC-cCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHH-Hhc--cCCCEEEEECC
Confidence 455666666652110 00 00235899999999999999985 26888988776432222 111 23467888888
Q ss_pred CCCC
Q 012961 270 TKRL 273 (452)
Q Consensus 270 ~~~l 273 (452)
+..+
T Consensus 114 ~l~~ 117 (353)
T 1i4w_A 114 PYDW 117 (353)
T ss_dssp TTCH
T ss_pred ccch
Confidence 7443
No 321
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=82.35 E-value=1.2 Score=43.20 Aligned_cols=90 Identities=11% Similarity=0.079 Sum_probs=52.3
Q ss_pred CCCEEEEECC--CCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCC-CC-------CCCCCceEEE
Q 012961 215 NIRNVLDVGC--GVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKR-LP-------YPSRSFELAH 284 (452)
Q Consensus 215 ~~~~VLDIGC--G~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~-lp-------~~d~sFDlVv 284 (452)
...+||-+|+ |.|..+..++.. .+..+...+.++...+.+++.+.... .|..+ -. ...+.+|+|+
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~--~G~~V~~~~~~~~~~~~~~~~g~~~~---~d~~~~~~~~~~~~~~~~~~~d~vi 219 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKL--KGCKVVGAAGSDEKIAYLKQIGFDAA---FNYKTVNSLEEALKKASPDGYDCYF 219 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHHTTCSEE---EETTSCSCHHHHHHHHCTTCEEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHhcCCcEE---EecCCHHHHHHHHHHHhCCCCeEEE
Confidence 4468999998 456655555542 12233333444555566655554322 23222 11 1124699998
Q ss_pred eccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 285 CSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 285 ~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
.+.. ...+....++|++||.+++..
T Consensus 220 ~~~g--------~~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 220 DNVG--------GEFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp ESSC--------HHHHHHHHTTEEEEEEEEECC
T ss_pred ECCC--------hHHHHHHHHHHhcCCEEEEEe
Confidence 6542 135788899999999998765
No 322
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=81.76 E-value=2.4 Score=41.47 Aligned_cols=95 Identities=14% Similarity=0.011 Sum_probs=55.8
Q ss_pred CCCEEEEECCCC-chHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC------CC---CCCceEEE
Q 012961 215 NIRNVLDVGCGV-ASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP------YP---SRSFELAH 284 (452)
Q Consensus 215 ~~~~VLDIGCG~-G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp------~~---d~sFDlVv 284 (452)
+..+||-+|+|. |.++..++.. .+..+...+.++...+.+++.|....+...+..++. .. .+.+|+|+
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~--~Ga~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~g~D~vi 245 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKA--YGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTI 245 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--cCCEEEEEcCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCCCCCEEE
Confidence 345899999863 5666666653 122333445566666777777755322211101110 01 24699998
Q ss_pred eccccccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012961 285 CSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSP 318 (452)
Q Consensus 285 ~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p 318 (452)
-... . ...+....++|+++|.+++...
T Consensus 246 d~~g-~------~~~~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 246 DCSG-N------EKCITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp ECSC-C------HHHHHHHHHHSCTTCEEEECSC
T ss_pred ECCC-C------HHHHHHHHHHHhcCCEEEEEec
Confidence 5431 1 2367888999999999998653
No 323
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=81.63 E-value=8.2 Score=38.39 Aligned_cols=95 Identities=13% Similarity=0.062 Sum_probs=56.9
Q ss_pred CEEEEECCCCchHHHHHhhCCCccccCChhhhhH-HHHHHHHHcCCCe-EEEEec-CCCCCCCCCCceEEEecccccccc
Q 012961 217 RNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHE-NQIQFALERGIPS-TLGVLG-TKRLPYPSRSFELAHCSRCRIDWL 293 (452)
Q Consensus 217 ~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~-~~~~~A~~rg~~~-~~~~~d-~~~lp~~d~sFDlVv~s~~~l~~~ 293 (452)
.+||.|+.+.|.++..|+...++.++=+ -++. +..+.++..+... .+...+ .+.+ ...||+|+... -...
T Consensus 40 ~~~~~~~d~~gal~~~~~~~~~~~~~ds--~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~l--pk~~ 112 (375)
T 4dcm_A 40 GPVLILNDAFGALSCALAEHKPYSIGDS--YISELATRENLRLNGIDESSVKFLDSTADY---PQQPGVVLIKV--PKTL 112 (375)
T ss_dssp SCEEEECCSSSHHHHHTGGGCCEEEESC--HHHHHHHHHHHHHTTCCGGGSEEEETTSCC---CSSCSEEEEEC--CSCH
T ss_pred CCEEEECCCCCHHHHhhccCCceEEEhH--HHHHHHHHHHHHHcCCCccceEeccccccc---ccCCCEEEEEc--CCCH
Confidence 3699999999999999987666555212 2232 2223333445432 122222 2322 25799987421 1222
Q ss_pred ccHHHHHHHHHHhcCCCcEEEEEeC
Q 012961 294 QRDGILLLELDRLLRPGGYFVYSSP 318 (452)
Q Consensus 294 ~d~~~~L~ei~RvLkPGG~lvi~~p 318 (452)
......|..+...|++|+.+++...
T Consensus 113 ~~l~~~L~~l~~~l~~~~~i~~~g~ 137 (375)
T 4dcm_A 113 ALLEQQLRALRKVVTSDTRIIAGAK 137 (375)
T ss_dssp HHHHHHHHHHHTTCCTTSEEEEEEE
T ss_pred HHHHHHHHHHHhhCCCCCEEEEEec
Confidence 3335578889999999999987653
No 324
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=80.40 E-value=1.8 Score=42.42 Aligned_cols=91 Identities=12% Similarity=0.088 Sum_probs=55.7
Q ss_pred CCCEEEEECCCC-chHHHHHhhCCCccc-cCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC--------CCCCCceEEE
Q 012961 215 NIRNVLDVGCGV-ASFGAYLLSHDIIAM-SLAPNDVHENQIQFALERGIPSTLGVLGTKRLP--------YPSRSFELAH 284 (452)
Q Consensus 215 ~~~~VLDIGCG~-G~~~~~La~~~v~~v-dis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp--------~~d~sFDlVv 284 (452)
+..+||=+|+|. |.++..++.. .+. .+...+.++...+.+++.|....+ +..... .....+|+|+
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~--~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi---~~~~~~~~~~v~~~t~g~g~D~v~ 240 (352)
T 3fpc_A 166 LGDTVCVIGIGPVGLMSVAGANH--LGAGRIFAVGSRKHCCDIALEYGATDII---NYKNGDIVEQILKATDGKGVDKVV 240 (352)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHT--TTCSSEEEECCCHHHHHHHHHHTCCEEE---CGGGSCHHHHHHHHTTTCCEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--cCCcEEEEECCCHHHHHHHHHhCCceEE---cCCCcCHHHHHHHHcCCCCCCEEE
Confidence 345799999874 6666666653 222 333345556667788877754322 221111 1224699998
Q ss_pred eccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 285 CSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 285 ~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
-... - ...+.++.++|++||.+++..
T Consensus 241 d~~g-~------~~~~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 241 IAGG-D------VHTFAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp ECSS-C------TTHHHHHHHHEEEEEEEEECC
T ss_pred ECCC-C------hHHHHHHHHHHhcCCEEEEec
Confidence 5432 1 136888999999999999764
No 325
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=78.40 E-value=1.3 Score=43.67 Aligned_cols=93 Identities=14% Similarity=0.067 Sum_probs=56.0
Q ss_pred CCCEEEEECCCC-chHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC------CCCCCceEEEecc
Q 012961 215 NIRNVLDVGCGV-ASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP------YPSRSFELAHCSR 287 (452)
Q Consensus 215 ~~~~VLDIGCG~-G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp------~~d~sFDlVv~s~ 287 (452)
+..+||=+|+|. |.++..+++. .+..+...+.++...+.+++.|....+. .+..++. .....+|+|+-..
T Consensus 189 ~g~~VlV~G~G~vG~~a~qla~~--~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~-~~~~~~~~~v~~~~~g~g~D~vid~~ 265 (363)
T 3uog_A 189 AGDRVVVQGTGGVALFGLQIAKA--TGAEVIVTSSSREKLDRAFALGADHGIN-RLEEDWVERVYALTGDRGADHILEIA 265 (363)
T ss_dssp TTCEEEEESSBHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHTCSEEEE-TTTSCHHHHHHHHHTTCCEEEEEEET
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--cCCEEEEEecCchhHHHHHHcCCCEEEc-CCcccHHHHHHHHhCCCCceEEEECC
Confidence 445899999764 5566666553 2334444455666677787777643322 1111110 1223699998543
Q ss_pred ccccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012961 288 CRIDWLQRDGILLLELDRLLRPGGYFVYSSP 318 (452)
Q Consensus 288 ~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p 318 (452)
. ...+....++|++||.+++...
T Consensus 266 g--------~~~~~~~~~~l~~~G~iv~~G~ 288 (363)
T 3uog_A 266 G--------GAGLGQSLKAVAPDGRISVIGV 288 (363)
T ss_dssp T--------SSCHHHHHHHEEEEEEEEEECC
T ss_pred C--------hHHHHHHHHHhhcCCEEEEEec
Confidence 2 1247788899999999998753
No 326
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=78.39 E-value=0.97 Score=44.92 Aligned_cols=91 Identities=16% Similarity=0.143 Sum_probs=51.7
Q ss_pred CCCEEEEECCCC-chHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEec---CCCCCCCCCCceEEEeccccc
Q 012961 215 NIRNVLDVGCGV-ASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLG---TKRLPYPSRSFELAHCSRCRI 290 (452)
Q Consensus 215 ~~~~VLDIGCG~-G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d---~~~lp~~d~sFDlVv~s~~~l 290 (452)
+..+||-+|+|. |.++..++.. .+..+...+.++...+.+++.|....+...+ ...+. +.+|+|+-....
T Consensus 194 ~g~~VlV~GaG~vG~~aiqlak~--~Ga~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~---~g~Dvvid~~g~- 267 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLAHA--MGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHL---KSFDFILNTVAA- 267 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH--TTCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTT---TCEEEEEECCSS-
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHcCCcEEeccccHHHHHHhh---cCCCEEEECCCC-
Confidence 345899999874 6666666652 1222333333444456666666443221111 11121 469999854321
Q ss_pred cccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 291 DWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 291 ~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
...+....++|+++|.+++..
T Consensus 268 ------~~~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 268 ------PHNLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp ------CCCHHHHHTTEEEEEEEEECC
T ss_pred ------HHHHHHHHHHhccCCEEEEec
Confidence 124677889999999998754
No 327
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=77.76 E-value=1.9 Score=42.73 Aligned_cols=94 Identities=15% Similarity=0.109 Sum_probs=55.9
Q ss_pred CCCEEEEECCCC-chHHHHHhhCCCccc-cCChhhhhHHHHHHHHHcCCCeEEEEecCCCC--------CCCCCCceEEE
Q 012961 215 NIRNVLDVGCGV-ASFGAYLLSHDIIAM-SLAPNDVHENQIQFALERGIPSTLGVLGTKRL--------PYPSRSFELAH 284 (452)
Q Consensus 215 ~~~~VLDIGCG~-G~~~~~La~~~v~~v-dis~~dis~~~~~~A~~rg~~~~~~~~d~~~l--------p~~d~sFDlVv 284 (452)
+..+||=+|+|. |.++..++.. .+. .+...+.++...+.+++.|....+. ....++ ....+.+|+|+
T Consensus 182 ~g~~VlV~GaG~vG~~aiqlak~--~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~-~~~~~~~~~i~~~~~~~~gg~Dvvi 258 (370)
T 4ej6_A 182 AGSTVAILGGGVIGLLTVQLARL--AGATTVILSTRQATKRRLAEEVGATATVD-PSAGDVVEAIAGPVGLVPGGVDVVI 258 (370)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH--TTCSEEEEECSCHHHHHHHHHHTCSEEEC-TTSSCHHHHHHSTTSSSTTCEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--cCCCEEEEECCCHHHHHHHHHcCCCEEEC-CCCcCHHHHHHhhhhccCCCCCEEE
Confidence 345899999864 5666666652 122 2333345566667787777543221 111110 02234799998
Q ss_pred eccccccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012961 285 CSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSP 318 (452)
Q Consensus 285 ~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p 318 (452)
-... ....+..+.++|++||.+++...
T Consensus 259 d~~G-------~~~~~~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 259 ECAG-------VAETVKQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp ECSC-------CHHHHHHHHHHEEEEEEEEECSC
T ss_pred ECCC-------CHHHHHHHHHHhccCCEEEEEec
Confidence 5431 13478899999999999998653
No 328
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=76.97 E-value=6.3 Score=38.70 Aligned_cols=126 Identities=13% Similarity=0.069 Sum_probs=68.9
Q ss_pred EEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCC---CCCCceEEEeccccccc--
Q 012961 218 NVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPY---PSRSFELAHCSRCRIDW-- 292 (452)
Q Consensus 218 ~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~---~d~sFDlVv~s~~~l~~-- 292 (452)
+++|+-||.|.++..+....+..--+...|+.+.+.+.-+.+.....+...|+..+.. +...+|+++.+.---.|
T Consensus 5 ~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~~~~~~~DI~~~~~~~~~~~~~D~l~ggpPCQ~fS~ 84 (333)
T 4h0n_A 5 KILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPETNLLNRNIQQLTPQVIKKWNVDTILMSPPCQPFTR 84 (333)
T ss_dssp EEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECCCGGGCCHHHHHHTTCCEEEECCCCCCSEE
T ss_pred EEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCCCceeccccccCCHHHhccCCCCEEEecCCCcchhh
Confidence 7999999999998888764321111223344455555555444445566677766642 22368999864210111
Q ss_pred ------cccHH-HHHHHHHHhc---C-CCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEE
Q 012961 293 ------LQRDG-ILLLELDRLL---R-PGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSK 348 (452)
Q Consensus 293 ------~~d~~-~~L~ei~RvL---k-PGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~ 348 (452)
..|.. .++.++.|++ + |. ++++..-.... ....++.+.+.++++||.+...
T Consensus 85 ag~~~~~~d~r~~L~~~~~r~i~~~~~P~-~~vlENV~gl~----~~~~~~~i~~~l~~~GY~v~~~ 146 (333)
T 4h0n_A 85 NGKYLDDNDPRTNSFLYLIGILDQLDNVD-YILMENVKGFE----NSTVRNLFIDKLKECNFIYQEF 146 (333)
T ss_dssp TTEECCTTCTTSCCHHHHHHHGGGCTTCC-EEEEEECTTGG----GSHHHHHHHHHHHHTTEEEEEE
T ss_pred hhhccCCcCcccccHHHHHHHHHHhcCCC-EEEEecchhhh----hhhHHHHHHHHHHhCCCeEEEE
Confidence 12221 2444555544 4 64 33332222111 1234778889999999987544
No 329
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=76.90 E-value=2.2 Score=41.55 Aligned_cols=93 Identities=9% Similarity=0.050 Sum_probs=53.4
Q ss_pred CCCEEEEECC--CCchHHHHHhhCCCccccCChhhhhHHHHHHHH-HcCCCeEEEEecCCCCC-----CCCCCceEEEec
Q 012961 215 NIRNVLDVGC--GVASFGAYLLSHDIIAMSLAPNDVHENQIQFAL-ERGIPSTLGVLGTKRLP-----YPSRSFELAHCS 286 (452)
Q Consensus 215 ~~~~VLDIGC--G~G~~~~~La~~~v~~vdis~~dis~~~~~~A~-~rg~~~~~~~~d~~~lp-----~~d~sFDlVv~s 286 (452)
+..+||-+|+ |.|..+..++.. .+..+...+.++...+.++ +.|....+-..+..++. ...+.+|+|+.+
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~--~G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~ 232 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKM--MGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFEN 232 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCEEEEEES
T ss_pred CCCEEEEECCCcHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCCcEEEEC
Confidence 3458999997 466666666652 1223333444555566666 34543222111111110 012469999855
Q ss_pred cccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 287 RCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 287 ~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
.. ...+....++|++||.+++..
T Consensus 233 ~g--------~~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 233 VG--------GKMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp SC--------HHHHHHHHTTEEEEEEEEECC
T ss_pred CC--------HHHHHHHHHHHhcCCEEEEEc
Confidence 42 136888999999999998764
No 330
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=76.42 E-value=3.7 Score=39.60 Aligned_cols=114 Identities=12% Similarity=0.092 Sum_probs=66.7
Q ss_pred EEEEECCCCchHHHHHhhC--CCccccCChhhhhHHHHHHHHHc---CCCeEEEEecCCC-C---CCCCCCceEEEeccc
Q 012961 218 NVLDVGCGVASFGAYLLSH--DIIAMSLAPNDVHENQIQFALER---GIPSTLGVLGTKR-L---PYPSRSFELAHCSRC 288 (452)
Q Consensus 218 ~VLDIGCG~G~~~~~La~~--~v~~vdis~~dis~~~~~~A~~r---g~~~~~~~~d~~~-l---p~~d~sFDlVv~s~~ 288 (452)
.+||+=+|+|.++..++.. .++.+|..+.+. +..++. ..++.+...|... + .-+...||+|+.--
T Consensus 94 ~~LDlfaGSGaLgiEaLS~~d~~vfvE~~~~a~-----~~L~~Nl~~~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDP- 167 (283)
T 2oo3_A 94 STLSYYPGSPYFAINQLRSQDRLYLCELHPTEY-----NFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDP- 167 (283)
T ss_dssp SSCCEEECHHHHHHHHSCTTSEEEEECCSHHHH-----HHHTTSCCTTSCEEEECSCHHHHHHHHCSCTTSCEEEEECC-
T ss_pred CceeEeCCcHHHHHHHcCCCCeEEEEeCCHHHH-----HHHHHHhCcCCcEEEEeCcHHHHHHHhcCCCCCccEEEECC-
Confidence 4899999999999999873 345555554433 333332 2357777777422 2 12335699999653
Q ss_pred cccccccHHHHHHHHHH--hcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCC
Q 012961 289 RIDWLQRDGILLLELDR--LLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCW 343 (452)
Q Consensus 289 ~l~~~~d~~~~L~ei~R--vLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf 343 (452)
-.+...+...++..+.+ .+.|+|.+++=-| -......+.+.+-+++.|.
T Consensus 168 PYe~k~~~~~vl~~L~~~~~r~~~Gi~v~WYP------i~~~~~~~~~~~~l~~~~~ 218 (283)
T 2oo3_A 168 SYERKEEYKEIPYAIKNAYSKFSTGLYCVWYP------VVNKAWTEQFLRKMREISS 218 (283)
T ss_dssp CCCSTTHHHHHHHHHHHHHHHCTTSEEEEEEE------ESSHHHHHHHHHHHHHHCS
T ss_pred CCCCCcHHHHHHHHHHHhCccCCCeEEEEEEe------ccchHHHHHHHHHHHhcCC
Confidence 12212344556666655 4578999888322 2222234456666665565
No 331
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=75.76 E-value=14 Score=36.06 Aligned_cols=124 Identities=9% Similarity=0.026 Sum_probs=65.8
Q ss_pred CCEEEEECCCCchHHHHHhhCC---CccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCC-CCCceEEEeccc---
Q 012961 216 IRNVLDVGCGVASFGAYLLSHD---IIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYP-SRSFELAHCSRC--- 288 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~~---v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~-d~sFDlVv~s~~--- 288 (452)
..++||+.||.|.++..+.... +.++|+. +.+++..+....... ..|+..+... -..+|+|+...-
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d-----~~a~~t~~~N~~~~~--~~Di~~~~~~~~~~~D~l~~gpPCQ~ 83 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGAECVYSNEWD-----KYAQEVYEMNFGEKP--EGDITQVNEKTIPDHDILCAGFPCQA 83 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCEEEEEECCC-----HHHHHHHHHHHSCCC--BSCGGGSCGGGSCCCSEEEEECCCTT
T ss_pred CCcEEEECCCcCHHHHHHHHCCCeEEEEEeCC-----HHHHHHHHHHcCCCC--cCCHHHcCHhhCCCCCEEEECCCCCC
Confidence 4589999999999998887652 3345444 444444333322211 4665554311 125899987421
Q ss_pred --ccc---ccccHH-HHHH---HHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEE
Q 012961 289 --RID---WLQRDG-ILLL---ELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSK 348 (452)
Q Consensus 289 --~l~---~~~d~~-~~L~---ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~ 348 (452)
... -..|.. .++. ++.+.++|.-+++=-++.... ......++.+...++++||.+...
T Consensus 84 fS~ag~~~g~~d~r~~L~~~~~r~i~~~~P~~~~~ENV~gl~~--~~~~~~~~~i~~~l~~~GY~v~~~ 150 (327)
T 2c7p_A 84 FSISGKQKGFEDSRGTLFFDIARIVREKKPKVVFMENVKNFAS--HDNGNTLEVVKNTMNELDYSFHAK 150 (327)
T ss_dssp TCTTSCCCGGGSTTSCHHHHHHHHHHHHCCSEEEEEEEGGGGT--GGGGHHHHHHHHHHHHTTBCCEEE
T ss_pred cchhcccCCCcchhhHHHHHHHHHHHhccCcEEEEeCcHHHHh--ccccHHHHHHHHHHHhCCCEEEEE
Confidence 100 012221 1333 344456886333322232221 122346788889999999875443
No 332
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=74.30 E-value=1.6 Score=42.61 Aligned_cols=91 Identities=11% Similarity=0.115 Sum_probs=57.4
Q ss_pred CCCEEEEECCCC-chHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCC------CCCCceEEEecc
Q 012961 215 NIRNVLDVGCGV-ASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPY------PSRSFELAHCSR 287 (452)
Q Consensus 215 ~~~~VLDIGCG~-G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~------~d~sFDlVv~s~ 287 (452)
+..+||-+|+|. |.++..+++. .+..+...+.++...+.+++.|....+ |..+..+ ..+.+|+|+-..
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~--~Ga~Vi~~~~~~~~~~~~~~lGa~~~i---~~~~~~~~~~~~~~~g~~d~vid~~ 240 (340)
T 3s2e_A 166 PGQWVVISGIGGLGHVAVQYARA--MGLRVAAVDIDDAKLNLARRLGAEVAV---NARDTDPAAWLQKEIGGAHGVLVTA 240 (340)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHTTCSEEE---ETTTSCHHHHHHHHHSSEEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--CCCeEEEEeCCHHHHHHHHHcCCCEEE---eCCCcCHHHHHHHhCCCCCEEEEeC
Confidence 445899999874 7777777763 133444445666777888877754322 2221111 013688887432
Q ss_pred ccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 288 CRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 288 ~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
. ....+..+.++|++||.+++..
T Consensus 241 g-------~~~~~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 241 V-------SPKAFSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp C-------CHHHHHHHHHHEEEEEEEEECS
T ss_pred C-------CHHHHHHHHHHhccCCEEEEeC
Confidence 1 1357889999999999999865
No 333
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=74.16 E-value=2 Score=41.74 Aligned_cols=90 Identities=13% Similarity=0.063 Sum_probs=54.1
Q ss_pred CCCEEEEECC--CCchHHHHHhhCCCccccCChhhhhHHHHHHH-HHcCCCeEEEEecCCCCC-------CCCCCceEEE
Q 012961 215 NIRNVLDVGC--GVASFGAYLLSHDIIAMSLAPNDVHENQIQFA-LERGIPSTLGVLGTKRLP-------YPSRSFELAH 284 (452)
Q Consensus 215 ~~~~VLDIGC--G~G~~~~~La~~~v~~vdis~~dis~~~~~~A-~~rg~~~~~~~~d~~~lp-------~~d~sFDlVv 284 (452)
+..+||-+|+ |.|..+..++.. .+..+...+.++...+.+ ++.+....+ |..... ...+.+|+|+
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~--~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~d~vi 223 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARL--KGCRVVGIAGGAEKCRFLVEELGFDGAI---DYKNEDLAAGLKRECPKGIDVFF 223 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHHTTCCSEEE---ETTTSCHHHHHHHHCTTCEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHcCCCEEE---ECCCHHHHHHHHHhcCCCceEEE
Confidence 4558999998 456666666653 123344445555666666 555543222 221111 1124699998
Q ss_pred eccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 285 CSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 285 ~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
.+.. ...+..+.+.|++||.+++..
T Consensus 224 ~~~g--------~~~~~~~~~~l~~~G~iv~~G 248 (336)
T 4b7c_A 224 DNVG--------GEILDTVLTRIAFKARIVLCG 248 (336)
T ss_dssp ESSC--------HHHHHHHHTTEEEEEEEEECC
T ss_pred ECCC--------cchHHHHHHHHhhCCEEEEEe
Confidence 5432 136888999999999999854
No 334
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=74.10 E-value=1.6 Score=42.49 Aligned_cols=88 Identities=23% Similarity=0.158 Sum_probs=51.3
Q ss_pred CCCEEEEECCC--CchHHHHHhh---CCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC--------CCCCCce
Q 012961 215 NIRNVLDVGCG--VASFGAYLLS---HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP--------YPSRSFE 281 (452)
Q Consensus 215 ~~~~VLDIGCG--~G~~~~~La~---~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp--------~~d~sFD 281 (452)
+..+||-+|+| .|..+..++. ..|++++.+ +...+.+++.|....+ +..... .....+|
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~-----~~~~~~~~~lga~~~~---~~~~~~~~~~~~~~~~~~g~D 215 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRN-----NKHTEELLRLGAAYVI---DTSTAPLYETVMELTNGIGAD 215 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESS-----STTHHHHHHHTCSEEE---ETTTSCHHHHHHHHTTTSCEE
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCC-----HHHHHHHHhCCCcEEE---eCCcccHHHHHHHHhCCCCCc
Confidence 44589999987 5666666665 244455443 3344566666654322 221111 1224799
Q ss_pred EEEeccccccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012961 282 LAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSP 318 (452)
Q Consensus 282 lVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p 318 (452)
+|+.... - ..+.+..++|++||.+++...
T Consensus 216 vvid~~g-~-------~~~~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 216 AAIDSIG-G-------PDGNELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp EEEESSC-H-------HHHHHHHHTEEEEEEEEECCC
T ss_pred EEEECCC-C-------hhHHHHHHHhcCCCEEEEEee
Confidence 9985432 1 123445589999999998653
No 335
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=73.57 E-value=1.7 Score=42.38 Aligned_cols=94 Identities=17% Similarity=0.138 Sum_probs=55.1
Q ss_pred CCEEEEECCCC-chHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEec----CCCCCCCCCCceEEEeccccc
Q 012961 216 IRNVLDVGCGV-ASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLG----TKRLPYPSRSFELAHCSRCRI 290 (452)
Q Consensus 216 ~~~VLDIGCG~-G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d----~~~lp~~d~sFDlVv~s~~~l 290 (452)
..+||-+|+|. |.++..+++....+..+...+.++...+.+++.|....+...+ ...+. ....+|+|+-... .
T Consensus 171 g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~-~g~g~D~vid~~g-~ 248 (344)
T 2h6e_A 171 EPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLT-DGLGASIAIDLVG-T 248 (344)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEEECHHHHHHHHHHHH-TTCCEEEEEESSC-C
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEEeccccchHHHHHhh-cCCCccEEEECCC-C
Confidence 34899999863 5555566543100334444555666677777766543221111 01111 1236999985432 1
Q ss_pred cccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 291 DWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 291 ~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
...+..+.++|++||.+++..
T Consensus 249 ------~~~~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 249 ------EETTYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp ------HHHHHHHHHHEEEEEEEEECC
T ss_pred ------hHHHHHHHHHhhcCCEEEEeC
Confidence 236888999999999998765
No 336
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=73.08 E-value=4.5 Score=39.34 Aligned_cols=91 Identities=14% Similarity=0.142 Sum_probs=54.5
Q ss_pred CCCEEEEECCC-CchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCC------CCceEEEecc
Q 012961 215 NIRNVLDVGCG-VASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPS------RSFELAHCSR 287 (452)
Q Consensus 215 ~~~~VLDIGCG-~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d------~sFDlVv~s~ 287 (452)
...+||-+|+| .|..+..++.. .+..+...+.++...+.+++.|... +.|..+..+.+ +.+|+|+...
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~--~Ga~Vi~~~~~~~~~~~~~~lGa~~---~~d~~~~~~~~~~~~~~~~~d~vid~~ 238 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKA--MGLNVVAVDIGDEKLELAKELGADL---VVNPLKEDAAKFMKEKVGGVHAAVVTA 238 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHH--TTCEEEEECSCHHHHHHHHHTTCSE---EECTTTSCHHHHHHHHHSSEEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHHHHCCCCE---EecCCCccHHHHHHHHhCCCCEEEECC
Confidence 34589999986 46666666543 1334444455666667777666432 12322111100 3699998543
Q ss_pred ccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 288 CRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 288 ~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
. . ...+....++|+++|.+++..
T Consensus 239 g-~------~~~~~~~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 239 V-S------KPAFQSAYNSIRRGGACVLVG 261 (339)
T ss_dssp C-C------HHHHHHHHHHEEEEEEEEECC
T ss_pred C-C------HHHHHHHHHHhhcCCEEEEec
Confidence 2 1 246888999999999998764
No 337
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=72.85 E-value=1.9 Score=42.22 Aligned_cols=94 Identities=14% Similarity=0.145 Sum_probs=53.4
Q ss_pred CCCEEEEECCC--CchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCC-----CCCC-CCceEEEec
Q 012961 215 NIRNVLDVGCG--VASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRL-----PYPS-RSFELAHCS 286 (452)
Q Consensus 215 ~~~~VLDIGCG--~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~l-----p~~d-~sFDlVv~s 286 (452)
+..+||-+|+| .|..+..++... .+..+...+.++...+.+++.+....+...+ .+. .... +.+|+|+..
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~-~Ga~Vi~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vi~~ 247 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAV-SGATIIGVDVREEAVEAAKRAGADYVINASM-QDPLAEIRRITESKGVDAVIDL 247 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHH-TCCEEEEEESSHHHHHHHHHHTCSEEEETTT-SCHHHHHHHHTTTSCEEEEEES
T ss_pred CCCEEEEECCCccHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHhCCCEEecCCC-ccHHHHHHHHhcCCCceEEEEC
Confidence 44589999997 445555554321 0223333444555566666666443222111 110 0111 479999854
Q ss_pred cccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 287 RCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 287 ~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
.. . ...+....++|+++|.+++..
T Consensus 248 ~g-~------~~~~~~~~~~l~~~G~iv~~g 271 (347)
T 1jvb_A 248 NN-S------EKTLSVYPKALAKQGKYVMVG 271 (347)
T ss_dssp CC-C------HHHHTTGGGGEEEEEEEEECC
T ss_pred CC-C------HHHHHHHHHHHhcCCEEEEEC
Confidence 32 1 246888899999999998765
No 338
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=72.39 E-value=1.5 Score=42.89 Aligned_cols=88 Identities=11% Similarity=0.028 Sum_probs=51.6
Q ss_pred CCCEEEEECC--CCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCC---CCC-----CCCCCce
Q 012961 215 NIRNVLDVGC--GVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTK---RLP-----YPSRSFE 281 (452)
Q Consensus 215 ~~~~VLDIGC--G~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~---~lp-----~~d~sFD 281 (452)
+..+||-+|+ |.|..+..++.. .|++++. ++...+.+++.+.... .|.. ++. ..++.+|
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~-----~~~~~~~~~~~g~~~~---~d~~~~~~~~~~~~~~~~~~~D 240 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDG-----GEGKEELFRSIGGEVF---IDFTKEKDIVGAVLKATDGGAH 240 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-----STTHHHHHHHTTCCEE---EETTTCSCHHHHHHHHHTSCEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcC-----CHHHHHHHHHcCCceE---EecCccHhHHHHHHHHhCCCCC
Confidence 3458999998 456666666542 3444433 3334455665554322 2322 110 0112699
Q ss_pred EEEeccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 282 LAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 282 lVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
+|+.+.. . ...++.+.+.|++||.+++..
T Consensus 241 ~vi~~~g-~------~~~~~~~~~~l~~~G~iv~~g 269 (347)
T 2hcy_A 241 GVINVSV-S------EAAIEASTRYVRANGTTVLVG 269 (347)
T ss_dssp EEEECSS-C------HHHHHHHTTSEEEEEEEEECC
T ss_pred EEEECCC-c------HHHHHHHHHHHhcCCEEEEEe
Confidence 9986542 1 247889999999999998765
No 339
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=71.65 E-value=3.5 Score=40.66 Aligned_cols=91 Identities=11% Similarity=0.009 Sum_probs=52.3
Q ss_pred CCCEEEEECCCC-chHHHHHhhC----CCccccCChhhhhHHHHHHHHHcCCCeEEEEecC-CCCC-----CCCCCceEE
Q 012961 215 NIRNVLDVGCGV-ASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGT-KRLP-----YPSRSFELA 283 (452)
Q Consensus 215 ~~~~VLDIGCG~-G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~-~~lp-----~~d~sFDlV 283 (452)
+..+||-+|+|. |.++..+++. .|++++ .++...+.+++.|....+...+. .++. ...+.+|+|
T Consensus 192 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~-----~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~v 266 (374)
T 1cdo_A 192 PGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVD-----LNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFS 266 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEC-----SCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEc-----CCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEE
Confidence 345899999763 5666666652 244443 34445566776665322211110 1110 112369999
Q ss_pred EeccccccccccHHHHHHHHHHhcCCC-cEEEEEe
Q 012961 284 HCSRCRIDWLQRDGILLLELDRLLRPG-GYFVYSS 317 (452)
Q Consensus 284 v~s~~~l~~~~d~~~~L~ei~RvLkPG-G~lvi~~ 317 (452)
+-... . ...+....++|++| |.+++..
T Consensus 267 id~~g-~------~~~~~~~~~~l~~~~G~iv~~G 294 (374)
T 1cdo_A 267 LECVG-N------VGVMRNALESCLKGWGVSVLVG 294 (374)
T ss_dssp EECSC-C------HHHHHHHHHTBCTTTCEEEECS
T ss_pred EECCC-C------HHHHHHHHHHhhcCCcEEEEEc
Confidence 85431 1 24688999999999 9999865
No 340
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=71.20 E-value=4.5 Score=39.89 Aligned_cols=91 Identities=12% Similarity=0.029 Sum_probs=52.0
Q ss_pred CCCEEEEECCCC-chHHHHHhhC----CCccccCChhhhhHHHHHHHHHcCCCeEEEEecC-CCC-----CCCCCCceEE
Q 012961 215 NIRNVLDVGCGV-ASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGT-KRL-----PYPSRSFELA 283 (452)
Q Consensus 215 ~~~~VLDIGCG~-G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~-~~l-----p~~d~sFDlV 283 (452)
+..+||-+|+|. |.++..++.. .|++++ .++...+.+++.|....+...+. .++ ....+.+|+|
T Consensus 191 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~-----~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~v 265 (374)
T 2jhf_A 191 QGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVD-----INKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFS 265 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEC-----SCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEc-----CCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEE
Confidence 345899999764 5566666542 244443 34444566666665322211110 111 0112369999
Q ss_pred EeccccccccccHHHHHHHHHHhcCCC-cEEEEEe
Q 012961 284 HCSRCRIDWLQRDGILLLELDRLLRPG-GYFVYSS 317 (452)
Q Consensus 284 v~s~~~l~~~~d~~~~L~ei~RvLkPG-G~lvi~~ 317 (452)
+-.... ...+....++|++| |.+++..
T Consensus 266 id~~g~-------~~~~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 266 FEVIGR-------LDTMVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp EECSCC-------HHHHHHHHHHBCTTTCEEEECS
T ss_pred EECCCC-------HHHHHHHHHHhhcCCcEEEEec
Confidence 854311 24688899999999 9998765
No 341
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=70.57 E-value=3.4 Score=40.55 Aligned_cols=90 Identities=14% Similarity=0.171 Sum_probs=53.0
Q ss_pred CCCEEEEECC--CCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC--------CCCCCceEEE
Q 012961 215 NIRNVLDVGC--GVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP--------YPSRSFELAH 284 (452)
Q Consensus 215 ~~~~VLDIGC--G~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp--------~~d~sFDlVv 284 (452)
+..+||-+|+ |.|..+..++.. .+..+...+.++...+.+++.+.... .|..+.. .....+|+|+
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~--~Ga~Vi~~~~~~~~~~~~~~~ga~~~---~d~~~~~~~~~~~~~~~~~~~D~vi 244 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARA--YGLKILGTAGTEEGQKIVLQNGAHEV---FNHREVNYIDKIKKYVGEKGIDIII 244 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHHTTCSEE---EETTSTTHHHHHHHHHCTTCEEEEE
T ss_pred CcCEEEEECCCChHHHHHHHHHHH--CCCEEEEEeCChhHHHHHHHcCCCEE---EeCCCchHHHHHHHHcCCCCcEEEE
Confidence 3458999997 456666555542 12333334445555566666664322 2222211 1123699998
Q ss_pred eccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 285 CSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 285 ~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
.+.. ...+....++|++||.+++..
T Consensus 245 ~~~G--------~~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 245 EMLA--------NVNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp ESCH--------HHHHHHHHHHEEEEEEEEECC
T ss_pred ECCC--------hHHHHHHHHhccCCCEEEEEe
Confidence 5432 135778899999999999865
No 342
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=70.35 E-value=4.3 Score=39.97 Aligned_cols=91 Identities=15% Similarity=0.036 Sum_probs=52.7
Q ss_pred CCCEEEEECCCC-chHHHHHhhC----CCccccCChhhhhHHHHHHHHHcCCCeEEEEecC-CCC-----CCCCCCceEE
Q 012961 215 NIRNVLDVGCGV-ASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGT-KRL-----PYPSRSFELA 283 (452)
Q Consensus 215 ~~~~VLDIGCG~-G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~-~~l-----p~~d~sFDlV 283 (452)
+..+||-+|+|. |.++..+++. .|++++. ++...+.+++.|....+...+. .++ ....+.+|+|
T Consensus 191 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~-----~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvv 265 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGT-----HKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYA 265 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECS-----CGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECC-----CHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEE
Confidence 345899999863 5666666652 3444443 3444566776665422211110 111 0112379999
Q ss_pred EeccccccccccHHHHHHHHHHhcCCC-cEEEEEe
Q 012961 284 HCSRCRIDWLQRDGILLLELDRLLRPG-GYFVYSS 317 (452)
Q Consensus 284 v~s~~~l~~~~d~~~~L~ei~RvLkPG-G~lvi~~ 317 (452)
+-... . ...+....++|+++ |.+++..
T Consensus 266 id~~g-~------~~~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 266 VECAG-R------IETMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp EECSC-C------HHHHHHHHHTBCTTTCEEEECC
T ss_pred EECCC-C------HHHHHHHHHHHhcCCCEEEEEc
Confidence 85431 1 24688899999999 9999765
No 343
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=70.13 E-value=4.1 Score=39.17 Aligned_cols=87 Identities=20% Similarity=0.169 Sum_probs=53.3
Q ss_pred EEEEECC--CCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCC-CCCCCCceEEEecccccc
Q 012961 218 NVLDVGC--GVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRL-PYPSRSFELAHCSRCRID 291 (452)
Q Consensus 218 ~VLDIGC--G~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~l-p~~d~sFDlVv~s~~~l~ 291 (452)
+||=+|+ |.|.++..+++. .|++++ .++...+.+++.|....+...+.... ....+.+|+|+-...
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~-----~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~d~v~d~~g--- 220 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVS-----GRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDTVG--- 220 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEE-----SCGGGHHHHHHHTCSEEEEGGGSSCCCSSCCCCEEEEEESSC---
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEe-----CCHHHHHHHHhcCCCEEEecCCHHHHHhhcCCCccEEEECCC---
Confidence 3999987 467777777753 444443 34445567777675433322221111 122357999874321
Q ss_pred ccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 292 WLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 292 ~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
...+.++.++|+++|.+++..
T Consensus 221 -----~~~~~~~~~~l~~~G~iv~~G 241 (324)
T 3nx4_A 221 -----DKVLAKVLAQMNYGGCVAACG 241 (324)
T ss_dssp -----HHHHHHHHHTEEEEEEEEECC
T ss_pred -----cHHHHHHHHHHhcCCEEEEEe
Confidence 237899999999999999865
No 344
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=69.83 E-value=4.3 Score=39.94 Aligned_cols=91 Identities=12% Similarity=0.014 Sum_probs=52.1
Q ss_pred CCCEEEEECCCC-chHHHHHhhC----CCccccCChhhhhHHHHHHHHHcCCCeEEEEecC-CCC-----CCCCCCceEE
Q 012961 215 NIRNVLDVGCGV-ASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGT-KRL-----PYPSRSFELA 283 (452)
Q Consensus 215 ~~~~VLDIGCG~-G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~-~~l-----p~~d~sFDlV 283 (452)
...+||-+|+|. |.++..++.. .|++++. ++...+.+++.|....+...+. .++ ....+.+|+|
T Consensus 190 ~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~-----~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~v 264 (373)
T 2fzw_A 190 PGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDI-----NKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYS 264 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECS-----CGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcC-----CHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCCCEE
Confidence 345899999763 5556666542 3444443 3444566666665432211110 111 0112369999
Q ss_pred EeccccccccccHHHHHHHHHHhcCCC-cEEEEEe
Q 012961 284 HCSRCRIDWLQRDGILLLELDRLLRPG-GYFVYSS 317 (452)
Q Consensus 284 v~s~~~l~~~~d~~~~L~ei~RvLkPG-G~lvi~~ 317 (452)
+-.... ...+..+.++|+++ |.+++..
T Consensus 265 id~~g~-------~~~~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 265 FECIGN-------VKVMRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp EECSCC-------HHHHHHHHHTBCTTTCEEEECS
T ss_pred EECCCc-------HHHHHHHHHhhccCCcEEEEEe
Confidence 854311 24688999999999 9999865
No 345
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=69.35 E-value=10 Score=37.01 Aligned_cols=95 Identities=14% Similarity=0.030 Sum_probs=53.3
Q ss_pred CCCEEEEECCCC-chHHHHHhhCCCcccc-CChhhhhHHHHHHHHHcCCCeEEEEecC---CCCC------CCCCCceEE
Q 012961 215 NIRNVLDVGCGV-ASFGAYLLSHDIIAMS-LAPNDVHENQIQFALERGIPSTLGVLGT---KRLP------YPSRSFELA 283 (452)
Q Consensus 215 ~~~~VLDIGCG~-G~~~~~La~~~v~~vd-is~~dis~~~~~~A~~rg~~~~~~~~d~---~~lp------~~d~sFDlV 283 (452)
++.+||=+|+|. |.++..+++. .+.. +...+.++...+.+++.+..+.....+. .++. .....+|+|
T Consensus 179 ~g~~VlV~GaG~vG~~aiqlak~--~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvv 256 (363)
T 3m6i_A 179 LGDPVLICGAGPIGLITMLCAKA--AGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVA 256 (363)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHH--TTCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--cCCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCCCCCCEE
Confidence 344788899864 5666666652 1222 2233445556667766532322222110 0100 123469999
Q ss_pred EeccccccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012961 284 HCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSP 318 (452)
Q Consensus 284 v~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p 318 (452)
+-... ....+..+.++|++||.+++...
T Consensus 257 id~~g-------~~~~~~~~~~~l~~~G~iv~~G~ 284 (363)
T 3m6i_A 257 LECTG-------VESSIAAAIWAVKFGGKVFVIGV 284 (363)
T ss_dssp EECSC-------CHHHHHHHHHHSCTTCEEEECCC
T ss_pred EECCC-------ChHHHHHHHHHhcCCCEEEEEcc
Confidence 85431 12468889999999999998653
No 346
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=68.21 E-value=4.5 Score=40.06 Aligned_cols=66 Identities=14% Similarity=0.028 Sum_probs=42.0
Q ss_pred CCCEEEEECCCCchHHHHHhhC-----CCccccCChhhhhHHHHHHHHH-cCCCeEEEEecCCCCC--CC----CCCceE
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH-----DIIAMSLAPNDVHENQIQFALE-RGIPSTLGVLGTKRLP--YP----SRSFEL 282 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~-----~v~~vdis~~dis~~~~~~A~~-rg~~~~~~~~d~~~lp--~~----d~sFDl 282 (452)
++..++|..||.|..+..+++. .|+++|.++. +++.|+. ...++.++..+..++. ++ .+++|.
T Consensus 57 pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~-----Al~~A~rL~~~Rv~lv~~nF~~l~~~L~~~g~~~~vDg 131 (347)
T 3tka_A 57 PDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQ-----AIAVAKTIDDPRFSIIHGPFSALGEYVAERDLIGKIDG 131 (347)
T ss_dssp TTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHH-----HHHHHTTCCCTTEEEEESCGGGHHHHHHHTTCTTCEEE
T ss_pred CCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHH-----HHHHHHhhcCCcEEEEeCCHHHHHHHHHhcCCCCcccE
Confidence 3458999999999999999864 3566665554 4444421 1335677777665542 01 135888
Q ss_pred EEe
Q 012961 283 AHC 285 (452)
Q Consensus 283 Vv~ 285 (452)
|+.
T Consensus 132 ILf 134 (347)
T 3tka_A 132 ILL 134 (347)
T ss_dssp EEE
T ss_pred EEE
Confidence 876
No 347
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=67.96 E-value=4 Score=40.30 Aligned_cols=92 Identities=15% Similarity=0.073 Sum_probs=53.9
Q ss_pred CCCEEEEECCC-CchHHHHHhhC----CCccccCChhhhhHHHHHHHHHcCCCeEEEEec-CCCC-----CCCCCCceEE
Q 012961 215 NIRNVLDVGCG-VASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLG-TKRL-----PYPSRSFELA 283 (452)
Q Consensus 215 ~~~~VLDIGCG-~G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d-~~~l-----p~~d~sFDlV 283 (452)
+..+||=+|+| .|.++..+++. .|++++ .++..++.+++.|....+...+ ..++ ....+.+|+|
T Consensus 193 ~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~-----~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~v 267 (378)
T 3uko_A 193 PGSNVAIFGLGTVGLAVAEGAKTAGASRIIGID-----IDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYS 267 (378)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHHTCSCEEEEC-----SCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEc-----CCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEE
Confidence 34579999986 36666666652 455554 4445556777766543221111 0111 0112479999
Q ss_pred EeccccccccccHHHHHHHHHHhcCCC-cEEEEEeC
Q 012961 284 HCSRCRIDWLQRDGILLLELDRLLRPG-GYFVYSSP 318 (452)
Q Consensus 284 v~s~~~l~~~~d~~~~L~ei~RvLkPG-G~lvi~~p 318 (452)
+-... ....+....++|++| |.+++...
T Consensus 268 id~~g-------~~~~~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 268 FECIG-------NVSVMRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp EECSC-------CHHHHHHHHHTBCTTTCEEEECSC
T ss_pred EECCC-------CHHHHHHHHHHhhccCCEEEEEcc
Confidence 85432 134688999999997 99998653
No 348
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=67.74 E-value=10 Score=35.98 Aligned_cols=78 Identities=17% Similarity=0.110 Sum_probs=46.8
Q ss_pred CCeEEEEecCCC-CC-----CCCCCceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHH
Q 012961 261 IPSTLGVLGTKR-LP-----YPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAM 334 (452)
Q Consensus 261 ~~~~~~~~d~~~-lp-----~~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l 334 (452)
.++.++.+++.+ +| .+..+||+|+.-.. .-......++.+...|+|||++++-+-.. ..-+. ....+
T Consensus 158 ~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D---~Y~~t~~~le~~~p~l~~GGvIv~DD~~~-~~w~G---~~~A~ 230 (257)
T 3tos_A 158 QRSVLVEGDVRETVPRYLAENPQTVIALAYFDLD---LYEPTKAVLEAIRPYLTKGSIVAFDELDN-PKWPG---ENIAM 230 (257)
T ss_dssp CSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCC---CHHHHHHHHHHHGGGEEEEEEEEESSTTC-TTCTH---HHHHH
T ss_pred CcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCc---ccchHHHHHHHHHHHhCCCcEEEEcCCCC-CCChH---HHHHH
Confidence 457888888543 22 24567999996442 22233457899999999999999865321 01111 22345
Q ss_pred HHHHHhCCCEE
Q 012961 335 YDLLKSMCWKI 345 (452)
Q Consensus 335 ~~ll~~~Gf~~ 345 (452)
.+++.+.+.++
T Consensus 231 ~ef~~~~~~~i 241 (257)
T 3tos_A 231 RKVLGLDHAPL 241 (257)
T ss_dssp HHHTCTTSSCC
T ss_pred HHHHhhCCCeE
Confidence 55555555543
No 349
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=67.63 E-value=4.7 Score=39.73 Aligned_cols=92 Identities=13% Similarity=0.022 Sum_probs=52.8
Q ss_pred CCCEEEEECCCC-chHHHHHhhC----CCccccCChhhhhHHHHHHHHHcCCCeEEEEecC-CCCC-----CCCCCceEE
Q 012961 215 NIRNVLDVGCGV-ASFGAYLLSH----DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGT-KRLP-----YPSRSFELA 283 (452)
Q Consensus 215 ~~~~VLDIGCG~-G~~~~~La~~----~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~-~~lp-----~~d~sFDlV 283 (452)
+..+||-+|+|. |.++..+++. .|++++ .++...+.+++.|....+...+. .++. ...+.+|+|
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~-----~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvv 269 (376)
T 1e3i_A 195 PGSTCAVFGLGCVGLSAIIGCKIAGASRIIAID-----INGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYS 269 (376)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEC-----SCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEc-----CCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEE
Confidence 345899999863 5666666652 244443 34445567776665422211110 1110 112369999
Q ss_pred EeccccccccccHHHHHHHHHHhcCCC-cEEEEEeC
Q 012961 284 HCSRCRIDWLQRDGILLLELDRLLRPG-GYFVYSSP 318 (452)
Q Consensus 284 v~s~~~l~~~~d~~~~L~ei~RvLkPG-G~lvi~~p 318 (452)
+-.... ...+....++|++| |.+++...
T Consensus 270 id~~G~-------~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 270 LDCAGT-------AQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp EESSCC-------HHHHHHHHHTBCTTTCEEEECCC
T ss_pred EECCCC-------HHHHHHHHHHhhcCCCEEEEECC
Confidence 854311 24688999999999 99997653
No 350
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=67.48 E-value=1.8 Score=41.68 Aligned_cols=84 Identities=18% Similarity=0.180 Sum_probs=49.3
Q ss_pred CCCEEEEECCC-CchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEeccccc
Q 012961 215 NIRNVLDVGCG-VASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRI 290 (452)
Q Consensus 215 ~~~~VLDIGCG-~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l 290 (452)
++.+||=+|+| .|.++..+++. +|++++ ++...+.+++.|....+ -|.+.+ .+.+|+|+-...
T Consensus 142 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~------~~~~~~~~~~lGa~~v~--~d~~~v---~~g~Dvv~d~~g-- 208 (315)
T 3goh_A 142 KQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS------ASLSQALAAKRGVRHLY--REPSQV---TQKYFAIFDAVN-- 208 (315)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC------SSCCHHHHHHHTEEEEE--SSGGGC---CSCEEEEECC----
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE------ChhhHHHHHHcCCCEEE--cCHHHh---CCCccEEEECCC--
Confidence 44589999995 36666666652 444444 33344666666643222 233333 467999984321
Q ss_pred cccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 291 DWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 291 ~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
...+....++|+++|.+++..
T Consensus 209 ------~~~~~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 209 ------SQNAAALVPSLKANGHIICIQ 229 (315)
T ss_dssp -----------TTGGGEEEEEEEEEEC
T ss_pred ------chhHHHHHHHhcCCCEEEEEe
Confidence 122467789999999999864
No 351
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=66.94 E-value=5.8 Score=38.53 Aligned_cols=90 Identities=11% Similarity=0.063 Sum_probs=54.1
Q ss_pred CCCEEEEECC--CCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC--------CCCCCceEEE
Q 012961 215 NIRNVLDVGC--GVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP--------YPSRSFELAH 284 (452)
Q Consensus 215 ~~~~VLDIGC--G~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp--------~~d~sFDlVv 284 (452)
+..+||-+|+ |.|..+..++... +..+...+.++...+.+++.+.... .|..+.. .....+|+|+
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~~ga~~~---~d~~~~~~~~~~~~~~~~~~~d~vi 240 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLF--GARVIATAGSEDKLRRAKALGADET---VNYTHPDWPKEVRRLTGGKGADKVV 240 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHTCSEE---EETTSTTHHHHHHHHTTTTCEEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHhcCCCEE---EcCCcccHHHHHHHHhCCCCceEEE
Confidence 3458999998 5677777766531 2233333445555566666564322 2322111 1124699998
Q ss_pred eccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 285 CSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 285 ~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
.... . ..+..+.++|+++|.+++..
T Consensus 241 ~~~g--~------~~~~~~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 241 DHTG--A------LYFEGVIKATANGGRIAIAG 265 (343)
T ss_dssp ESSC--S------SSHHHHHHHEEEEEEEEESS
T ss_pred ECCC--H------HHHHHHHHhhccCCEEEEEe
Confidence 6542 1 25788889999999998765
No 352
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=66.19 E-value=5.4 Score=38.86 Aligned_cols=90 Identities=11% Similarity=0.046 Sum_probs=52.4
Q ss_pred CCEEEEECCCC-chHHHHHhhCCCccc-cCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC--------CCCCCceEEEe
Q 012961 216 IRNVLDVGCGV-ASFGAYLLSHDIIAM-SLAPNDVHENQIQFALERGIPSTLGVLGTKRLP--------YPSRSFELAHC 285 (452)
Q Consensus 216 ~~~VLDIGCG~-G~~~~~La~~~v~~v-dis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp--------~~d~sFDlVv~ 285 (452)
..+||-+|+|. |..+..++.. .+. .+...+.++...+.+++.|.... .+...-. .....+|+|+.
T Consensus 168 g~~VlV~GaG~vG~~~~q~a~~--~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~---~~~~~~~~~~~v~~~~~g~g~D~vid 242 (348)
T 2d8a_A 168 GKSVLITGAGPLGLLGIAVAKA--SGAYPVIVSEPSDFRRELAKKVGADYV---INPFEEDVVKEVMDITDGNGVDVFLE 242 (348)
T ss_dssp TCCEEEECCSHHHHHHHHHHHH--TTCCSEEEECSCHHHHHHHHHHTCSEE---ECTTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHH--cCCCEEEEECCCHHHHHHHHHhCCCEE---ECCCCcCHHHHHHHHcCCCCCCEEEE
Confidence 34799999852 5555555542 122 23333445556667776664322 2222111 11236999985
Q ss_pred ccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 286 SRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 286 s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
.... ...+..+.++|+++|.+++..
T Consensus 243 ~~g~-------~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 243 FSGA-------PKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp CSCC-------HHHHHHHHHHEEEEEEEEECC
T ss_pred CCCC-------HHHHHHHHHHHhcCCEEEEEc
Confidence 4321 246888999999999998765
No 353
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=65.62 E-value=3.1 Score=40.21 Aligned_cols=93 Identities=13% Similarity=0.039 Sum_probs=54.6
Q ss_pred CCCEEEEECC--CCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC------CCCCCceEEEec
Q 012961 215 NIRNVLDVGC--GVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP------YPSRSFELAHCS 286 (452)
Q Consensus 215 ~~~~VLDIGC--G~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp------~~d~sFDlVv~s 286 (452)
+..+||=+|+ |.|..+..++.. .+..+...+.++...+.+++.|....+. ....++. .....+|+|+..
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~--~Ga~Vi~~~~~~~~~~~~~~~Ga~~~~~-~~~~~~~~~~~~~~~~~g~Dvvid~ 216 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKA--LGAKLIGTVSSPEKAAHAKALGAWETID-YSHEDVAKRVLELTDGKKCPVVYDG 216 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHH--HTCEEEEEESSHHHHHHHHHHTCSEEEE-TTTSCHHHHHHHHTTTCCEEEEEES
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHcCCCEEEe-CCCccHHHHHHHHhCCCCceEEEEC
Confidence 4458999983 456666666653 1223333345566667777766443221 1111110 122469999864
Q ss_pred cccccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012961 287 RCRIDWLQRDGILLLELDRLLRPGGYFVYSSP 318 (452)
Q Consensus 287 ~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p 318 (452)
... ..+....++|++||.+++...
T Consensus 217 ~g~--------~~~~~~~~~l~~~G~iv~~g~ 240 (325)
T 3jyn_A 217 VGQ--------DTWLTSLDSVAPRGLVVSFGN 240 (325)
T ss_dssp SCG--------GGHHHHHTTEEEEEEEEECCC
T ss_pred CCh--------HHHHHHHHHhcCCCEEEEEec
Confidence 421 257788999999999998653
No 354
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=64.68 E-value=3.7 Score=39.72 Aligned_cols=92 Identities=15% Similarity=0.075 Sum_probs=54.3
Q ss_pred CCCEEEEECC--CCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC------CCCCCceEEEec
Q 012961 215 NIRNVLDVGC--GVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP------YPSRSFELAHCS 286 (452)
Q Consensus 215 ~~~~VLDIGC--G~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp------~~d~sFDlVv~s 286 (452)
+..+||=+|+ |.|..+..++.. .+..+...+.++...+.+++.|....+. ....++. .....+|+|+..
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~--~Ga~Vi~~~~~~~~~~~~~~~ga~~~~~-~~~~~~~~~~~~~~~~~g~D~vid~ 224 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKM--KGAHTIAVASTDEKLKIAKEYGAEYLIN-ASKEDILRQVLKFTNGKGVDASFDS 224 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHHTTCSEEEE-TTTSCHHHHHHHHTTTSCEEEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHcCCcEEEe-CCCchHHHHHHHHhCCCCceEEEEC
Confidence 4568999994 356666666653 1333444455566667777766443221 1111110 113469999854
Q ss_pred cccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 287 RCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 287 ~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
... ..+..+.++|++||.+++..
T Consensus 225 ~g~--------~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 225 VGK--------DTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp CGG--------GGHHHHHHHEEEEEEEEECC
T ss_pred CCh--------HHHHHHHHHhccCCEEEEEc
Confidence 421 35788889999999999864
No 355
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=64.41 E-value=4.8 Score=39.12 Aligned_cols=93 Identities=12% Similarity=0.110 Sum_probs=56.2
Q ss_pred CCCEEEEECCCC-chHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC-----C-CCCCceEEEecc
Q 012961 215 NIRNVLDVGCGV-ASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP-----Y-PSRSFELAHCSR 287 (452)
Q Consensus 215 ~~~~VLDIGCG~-G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp-----~-~d~sFDlVv~s~ 287 (452)
+..+||=+|+|. |.++..+++.. -+..+...+.++...+.+++.|....+.. + .++. . ....+|+|+-..
T Consensus 171 ~g~~vlv~GaG~vG~~a~qla~~~-g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~-~-~~~~~~v~~~t~g~g~d~v~d~~ 247 (345)
T 3jv7_A 171 PGSTAVVIGVGGLGHVGIQILRAV-SAARVIAVDLDDDRLALAREVGADAAVKS-G-AGAADAIRELTGGQGATAVFDFV 247 (345)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHH-CCCEEEEEESCHHHHHHHHHTTCSEEEEC-S-TTHHHHHHHHHGGGCEEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHcCCCEEEcC-C-CcHHHHHHHHhCCCCCeEEEECC
Confidence 345899999864 66666666521 02233344556677788888775533221 1 1110 0 123699998543
Q ss_pred ccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 288 CRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 288 ~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
. ....+..+.++|++||.+++..
T Consensus 248 G-------~~~~~~~~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 248 G-------AQSTIDTAQQVVAVDGHISVVG 270 (345)
T ss_dssp C-------CHHHHHHHHHHEEEEEEEEECS
T ss_pred C-------CHHHHHHHHHHHhcCCEEEEEC
Confidence 1 1247889999999999999865
No 356
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=63.74 E-value=1.6 Score=42.92 Aligned_cols=92 Identities=20% Similarity=0.237 Sum_probs=50.8
Q ss_pred CCCEEEEECCCC-chHHHHHhh---CCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCC--CCCCCCceEEEeccc
Q 012961 215 NIRNVLDVGCGV-ASFGAYLLS---HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRL--PYPSRSFELAHCSRC 288 (452)
Q Consensus 215 ~~~~VLDIGCG~-G~~~~~La~---~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~l--p~~d~sFDlVv~s~~ 288 (452)
+..+||-+|+|. |.++..+++ ..|++++. ++...+.+++.|....+...+..++ ... +.+|+|+....
T Consensus 179 ~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~-----~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~-~~~D~vid~~g 252 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLISKAMGAETYVISR-----SSRKREDAMKMGADHYIATLEEGDWGEKYF-DTFDLIVVCAS 252 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEES-----SSTTHHHHHHHTCSEEEEGGGTSCHHHHSC-SCEEEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcC-----CHHHHHHHHHcCCCEEEcCcCchHHHHHhh-cCCCEEEECCC
Confidence 345899999853 555666654 23444443 3344466666664432211111011 011 46999986542
Q ss_pred cccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 289 RIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 289 ~l~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
.. ....+..+.++|++||.+++..
T Consensus 253 ~~-----~~~~~~~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 253 SL-----TDIDFNIMPKAMKVGGRIVSIS 276 (360)
T ss_dssp CS-----TTCCTTTGGGGEEEEEEEEECC
T ss_pred CC-----cHHHHHHHHHHhcCCCEEEEec
Confidence 10 0123567788999999998754
No 357
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=61.85 E-value=25 Score=36.33 Aligned_cols=124 Identities=6% Similarity=0.094 Sum_probs=66.8
Q ss_pred CCEEEEECCCCchHHHHHhhCC---CccccCChhhhhHHHHHHHHHcC---CCeEEEEecCCCCCCC-------------
Q 012961 216 IRNVLDVGCGVASFGAYLLSHD---IIAMSLAPNDVHENQIQFALERG---IPSTLGVLGTKRLPYP------------- 276 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~~---v~~vdis~~dis~~~~~~A~~rg---~~~~~~~~d~~~lp~~------------- 276 (452)
.-+++|+=||.|.++.-+.... +.++|+ .+.+.+.-+.+. ....+...|+..+...
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG~~~v~avE~-----d~~A~~ty~~N~~~~p~~~~~~~DI~~i~~~~~~~~~~~~~~~~ 162 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIGGQCVFTSEW-----NKHAVRTYKANHYCDPATHHFNEDIRDITLSHQEGVSDEAAAEH 162 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTTEEEEEEECC-----CHHHHHHHHHHSCCCTTTCEEESCTHHHHCTTCTTSCHHHHHHH
T ss_pred cceEEEecCCccHHHHHHHHCCCEEEEEEeC-----CHHHHHHHHHhcccCCCcceeccchhhhhhccccccchhhHHhh
Confidence 4589999999999998887652 344444 444434333332 2344556665544211
Q ss_pred ----CCCceEEEecccccccc-----------------ccH-HHHHHHHH---HhcCCCcEEEEEeCCCCCCChhhHHHH
Q 012961 277 ----SRSFELAHCSRCRIDWL-----------------QRD-GILLLELD---RLLRPGGYFVYSSPEAYAHDPENRRIW 331 (452)
Q Consensus 277 ----d~sFDlVv~s~~~l~~~-----------------~d~-~~~L~ei~---RvLkPGG~lvi~~p~~~~~~~~~~~~~ 331 (452)
-..+|+|+...---.|. .+. ..++.++. +.++|.-+++=-++.... ......|
T Consensus 163 i~~~~~~~Dvl~gGpPCQ~FS~AG~~k~~~~g~~~G~~~D~R~~Lf~e~~riI~~~rPk~fvlENV~gl~s--~~~g~~f 240 (482)
T 3me5_A 163 IRQHIPEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLFFDVVRIIDARRPAMFVLENVKNLKS--HDKGKTF 240 (482)
T ss_dssp HHHHSCCCSEEEEECCCCCC------------------CTTTTSHHHHHHHHHHHHCCSEEEEEEETTTTT--GGGGHHH
T ss_pred hhhcCCCCCEEEecCCCcchhhhCcccccccccccccccCccccHHHHHHHHHHHcCCcEEEEeCcHHHhc--ccCCcHH
Confidence 13589888632101110 011 12444444 445785433322343321 1233467
Q ss_pred HHHHHHHHhCCCEEE
Q 012961 332 NAMYDLLKSMCWKIV 346 (452)
Q Consensus 332 ~~l~~ll~~~Gf~~v 346 (452)
..+.+.++++||.+.
T Consensus 241 ~~i~~~L~~lGY~v~ 255 (482)
T 3me5_A 241 RIIMQTLDELGYDVA 255 (482)
T ss_dssp HHHHHHHHHTTEEET
T ss_pred HHHHHHHhcCCcEEE
Confidence 888899999999873
No 358
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=61.80 E-value=3.4 Score=39.82 Aligned_cols=87 Identities=21% Similarity=0.205 Sum_probs=49.6
Q ss_pred EEEEECC--CCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcCCCeEEEEecC--CC-CCCCCCCceEEEecccc
Q 012961 218 NVLDVGC--GVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGT--KR-LPYPSRSFELAHCSRCR 289 (452)
Q Consensus 218 ~VLDIGC--G~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~--~~-lp~~d~sFDlVv~s~~~ 289 (452)
+||=+|+ |.|.++..++.. .|++++. ++...+.+++.|....+...+. .. .....+.+|+|+-....
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~-----~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~d~vid~~g~ 226 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTG-----KAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGG 226 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEES-----CTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEECSTT
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEEC-----CHHHHHHHHHcCCcEEEecCCcHHHHHHHhcCCcccEEEECCcH
Confidence 6999997 466777777652 3444433 3334456666664432211111 00 11223469998854321
Q ss_pred ccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 290 IDWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 290 l~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
..+....++|++||.+++..
T Consensus 227 --------~~~~~~~~~l~~~G~~v~~G 246 (328)
T 1xa0_A 227 --------RTLATVLSRMRYGGAVAVSG 246 (328)
T ss_dssp --------TTHHHHHHTEEEEEEEEECS
T ss_pred --------HHHHHHHHhhccCCEEEEEe
Confidence 24778889999999999865
No 359
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=61.68 E-value=12 Score=37.27 Aligned_cols=93 Identities=12% Similarity=0.088 Sum_probs=51.7
Q ss_pred CCCEEEEECCCC-chHHHHHhhCCCccc-cCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC--------CCCCCceEEE
Q 012961 215 NIRNVLDVGCGV-ASFGAYLLSHDIIAM-SLAPNDVHENQIQFALERGIPSTLGVLGTKRLP--------YPSRSFELAH 284 (452)
Q Consensus 215 ~~~~VLDIGCG~-G~~~~~La~~~v~~v-dis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp--------~~d~sFDlVv 284 (452)
+..+||=+|+|. |.++..++.. .+. .+...+.++...+.+++.|....+ +..... .....+|+|+
T Consensus 213 ~g~~VlV~GaG~vG~~aiqlak~--~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi---~~~~~~~~~~i~~~t~g~g~D~vi 287 (404)
T 3ip1_A 213 PGDNVVILGGGPIGLAAVAILKH--AGASKVILSEPSEVRRNLAKELGADHVI---DPTKENFVEAVLDYTNGLGAKLFL 287 (404)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH--TTCSEEEEECSCHHHHHHHHHHTCSEEE---CTTTSCHHHHHHHHTTTCCCSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHH--cCCCEEEEECCCHHHHHHHHHcCCCEEE---cCCCCCHHHHHHHHhCCCCCCEEE
Confidence 345899999863 5555556542 122 333445566667788877754322 221111 1224699998
Q ss_pred eccccccccccHHHHHHHHHHhc----CCCcEEEEEeC
Q 012961 285 CSRCRIDWLQRDGILLLELDRLL----RPGGYFVYSSP 318 (452)
Q Consensus 285 ~s~~~l~~~~d~~~~L~ei~RvL----kPGG~lvi~~p 318 (452)
-... .....+..+.++| ++||.+++...
T Consensus 288 d~~g------~~~~~~~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 288 EATG------VPQLVWPQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp ECSS------CHHHHHHHHHHHHHHCSCCCCEEEECSC
T ss_pred ECCC------CcHHHHHHHHHHHHhccCCCcEEEEeCC
Confidence 5431 1122444444555 99999998653
No 360
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=60.97 E-value=4.2 Score=39.15 Aligned_cols=90 Identities=13% Similarity=-0.004 Sum_probs=51.2
Q ss_pred CCCEEEEECC--CCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC--------CCCCCceEEE
Q 012961 215 NIRNVLDVGC--GVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP--------YPSRSFELAH 284 (452)
Q Consensus 215 ~~~~VLDIGC--G~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp--------~~d~sFDlVv 284 (452)
...+||-+|+ |.|..+..++.. .+..+...+.++...+.+++.+....+ |..+.. .....+|+|+
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~--~G~~V~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~~D~vi 214 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKA--LGAKLIGTVGTAQKAQSALKAGAWQVI---NYREEDLVERLKEITGGKKVRVVY 214 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHH--HTCEEEEEESSHHHHHHHHHHTCSEEE---ETTTSCHHHHHHHHTTTCCEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHHHHcCCCEEE---ECCCccHHHHHHHHhCCCCceEEE
Confidence 3458999994 455555555542 122333334445555666655543222 221111 1124699998
Q ss_pred eccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 285 CSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 285 ~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
.+.. ...+..+.++|++||.+++..
T Consensus 215 ~~~g--------~~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 215 DSVG--------RDTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp ECSC--------GGGHHHHHHTEEEEEEEEECC
T ss_pred ECCc--------hHHHHHHHHHhcCCCEEEEEe
Confidence 6542 135788899999999998765
No 361
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=60.59 E-value=6.8 Score=37.83 Aligned_cols=72 Identities=18% Similarity=0.098 Sum_probs=43.9
Q ss_pred CCCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCC----CCCceEEEec
Q 012961 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYP----SRSFELAHCS 286 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~----d~sFDlVv~s 286 (452)
...++||+=||.|.++..+.+..+...-+...|+++.+.+.-+.+.....+...|+.++... ...+|+++..
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~~~~~~~~DI~~i~~~~i~~~~~~Dll~gg 90 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQGKIMYVGDVRSVTQKHIQEWGPFDLVIGG 90 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTTTCEEEECCGGGCCHHHHHHTCCCSEEEEC
T ss_pred CCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCCCCceeCCChHHccHHHhcccCCcCEEEec
Confidence 34589999999999988887652111002344555555454444444455677887766421 1369999874
No 362
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=60.43 E-value=4.1 Score=39.68 Aligned_cols=88 Identities=15% Similarity=0.128 Sum_probs=51.2
Q ss_pred CCCEEEEECC--CCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC------CCCCCceEE
Q 012961 215 NIRNVLDVGC--GVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP------YPSRSFELA 283 (452)
Q Consensus 215 ~~~~VLDIGC--G~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp------~~d~sFDlV 283 (452)
...+||=+|+ |.|..+..++.. .|++++ .++...+.+++.|....+ ..+ .++. .....+|+|
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~-----~~~~~~~~~~~~ga~~v~-~~~-~~~~~~v~~~~~~~g~Dvv 231 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVV-----NRTAATEFVKSVGADIVL-PLE-EGWAKAVREATGGAGVDMV 231 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-----SSGGGHHHHHHHTCSEEE-ESS-TTHHHHHHHHTTTSCEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEe-----CCHHHHHHHHhcCCcEEe-cCc-hhHHHHHHHHhCCCCceEE
Confidence 4568999997 456677666653 344443 333444566666654322 111 1110 122369999
Q ss_pred EeccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 284 HCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 284 v~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
+.... . ..+..+.+.|++||.+++..
T Consensus 232 id~~g-~-------~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 232 VDPIG-G-------PAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp EESCC----------CHHHHHHTEEEEEEEEEC-
T ss_pred EECCc-h-------hHHHHHHHhhcCCCEEEEEE
Confidence 85432 1 25778889999999999754
No 363
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=59.62 E-value=4 Score=39.41 Aligned_cols=87 Identities=18% Similarity=0.211 Sum_probs=50.5
Q ss_pred EEEEECC--CCchHHHHHhh---CCCccccCChhhhhHHHHHHHHHcCCCeEEEEecC--CCC-CCCCCCceEEEecccc
Q 012961 218 NVLDVGC--GVASFGAYLLS---HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGT--KRL-PYPSRSFELAHCSRCR 289 (452)
Q Consensus 218 ~VLDIGC--G~G~~~~~La~---~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~--~~l-p~~d~sFDlVv~s~~~ 289 (452)
+||=+|+ |.|.++..++. ..|++++.+ +...+.+++.|....+...+. ..+ ....+.+|+|+-...
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~-----~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~~~d~vid~~g- 226 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGN-----REAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPVG- 226 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHTCCEEEEESS-----SSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEESCC-
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCC-----HHHHHHHHHcCCcEEEECCCchHHHHHHhhcCCccEEEECCc-
Confidence 6999997 45666666664 344444433 233455666564432221111 111 122346999985432
Q ss_pred ccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 290 IDWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 290 l~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
. ..+.+..++|++||.+++..
T Consensus 227 -----~--~~~~~~~~~l~~~G~iv~~G 247 (330)
T 1tt7_A 227 -----G--KQLASLLSKIQYGGSVAVSG 247 (330)
T ss_dssp -----T--HHHHHHHTTEEEEEEEEECC
T ss_pred -----H--HHHHHHHHhhcCCCEEEEEe
Confidence 1 36888899999999999865
No 364
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=59.60 E-value=42 Score=32.04 Aligned_cols=123 Identities=8% Similarity=0.018 Sum_probs=67.9
Q ss_pred EEEEECCCCchHHHHHhhCC---CccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCC-CCCceEEEecc-----c
Q 012961 218 NVLDVGCGVASFGAYLLSHD---IIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYP-SRSFELAHCSR-----C 288 (452)
Q Consensus 218 ~VLDIGCG~G~~~~~La~~~---v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~-d~sFDlVv~s~-----~ 288 (452)
+|||+=||.|.++.-|.+.. +.++|+.+. +.+.-+... +..+...|+.++... -..+|+++... +
T Consensus 2 kvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~-----a~~ty~~N~-~~~~~~~DI~~i~~~~~~~~D~l~ggpPCQ~fS 75 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAGFRIICANEYDKS-----IWKTYESNH-SAKLIKGDISKISSDEFPKCDGIIGGPPSQSWS 75 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTTCEEEEEEECCTT-----THHHHHHHC-CSEEEESCGGGCCGGGSCCCSEEECCCCGGGTE
T ss_pred eEEEeCcCccHHHHHHHHCCCEEEEEEeCCHH-----HHHHHHHHC-CCCcccCChhhCCHhhCCcccEEEecCCCCCcC
Confidence 69999999999988887653 334555443 333323322 346677887766421 13589998642 1
Q ss_pred ccc---ccccH-HHHHHH---HHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEE
Q 012961 289 RID---WLQRD-GILLLE---LDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSK 348 (452)
Q Consensus 289 ~l~---~~~d~-~~~L~e---i~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~ 348 (452)
... -..|. ..++.+ +.+.++|.-.++=-++..... .....+..+.+.++++||.+...
T Consensus 76 ~ag~~~g~~d~R~~L~~~~~r~i~~~~Pk~~~~ENV~gl~~~--~~~~~~~~i~~~l~~~GY~v~~~ 140 (331)
T 3ubt_Y 76 EGGSLRGIDDPRGKLFYEYIRILKQKKPIFFLAENVKGMMAQ--RHNKAVQEFIQEFDNAGYDVHII 140 (331)
T ss_dssp ETTEECCTTCGGGHHHHHHHHHHHHHCCSEEEEEECCGGGGC--TTSHHHHHHHHHHHHHTEEEEEE
T ss_pred CCCCccCCCCchhHHHHHHHHHHhccCCeEEEeeeecccccc--cccchhhhhhhhhccCCcEEEEE
Confidence 111 11233 234444 444568864333222222211 12245778888889999976544
No 365
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=59.30 E-value=6.4 Score=38.94 Aligned_cols=93 Identities=22% Similarity=0.277 Sum_probs=54.8
Q ss_pred CCCEEEEECCC-CchHHHHHhhCCCcc-ccCChhhhhHHHHHHHHHcCCCeEEEEec---CCC----C-C-CCCCCceEE
Q 012961 215 NIRNVLDVGCG-VASFGAYLLSHDIIA-MSLAPNDVHENQIQFALERGIPSTLGVLG---TKR----L-P-YPSRSFELA 283 (452)
Q Consensus 215 ~~~~VLDIGCG-~G~~~~~La~~~v~~-vdis~~dis~~~~~~A~~rg~~~~~~~~d---~~~----l-p-~~d~sFDlV 283 (452)
+..+||-+|+| .|.++..++.. .+ ..+...+.++...+.+++.|....+. .. ..+ + . .....+|+|
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~--~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~-~~~~~~~~~~~~v~~~~~g~g~Dvv 271 (380)
T 1vj0_A 195 AGKTVVIQGAGPLGLFGVVIARS--LGAENVIVIAGSPNRLKLAEEIGADLTLN-RRETSVEERRKAIMDITHGRGADFI 271 (380)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHH--TTBSEEEEEESCHHHHHHHHHTTCSEEEE-TTTSCHHHHHHHHHHHTTTSCEEEE
T ss_pred CCCEEEEECcCHHHHHHHHHHHH--cCCceEEEEcCCHHHHHHHHHcCCcEEEe-ccccCcchHHHHHHHHhCCCCCcEE
Confidence 34589999966 35566666653 13 24444455666677787776543221 11 001 0 0 112369999
Q ss_pred EeccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 284 HCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 284 v~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
+-... . ...+.+..++|++||.+++..
T Consensus 272 id~~g-~------~~~~~~~~~~l~~~G~iv~~G 298 (380)
T 1vj0_A 272 LEATG-D------SRALLEGSELLRRGGFYSVAG 298 (380)
T ss_dssp EECSS-C------TTHHHHHHHHEEEEEEEEECC
T ss_pred EECCC-C------HHHHHHHHHHHhcCCEEEEEe
Confidence 85432 1 136788899999999999765
No 366
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=58.77 E-value=9.1 Score=37.39 Aligned_cols=89 Identities=12% Similarity=0.077 Sum_probs=51.6
Q ss_pred CEEEEECCC-CchHH-HHHh-hCCCcccc-CChhhhhHH---HHHHHHHcCCCeEEEEecCCCCCCC-----CCCceEEE
Q 012961 217 RNVLDVGCG-VASFG-AYLL-SHDIIAMS-LAPNDVHEN---QIQFALERGIPSTLGVLGTKRLPYP-----SRSFELAH 284 (452)
Q Consensus 217 ~~VLDIGCG-~G~~~-~~La-~~~v~~vd-is~~dis~~---~~~~A~~rg~~~~~~~~d~~~lp~~-----d~sFDlVv 284 (452)
.+||=+|+| .|.++ ..++ +. .+.. +...+.++. ..+.+++.|.. .. +...-.+. .+.||+|+
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~--~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~--~v--~~~~~~~~~i~~~~gg~Dvvi 247 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDD--KGYENLYCLGRRDRPDPTIDIIEELDAT--YV--DSRQTPVEDVPDVYEQMDFIY 247 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCT--TCCCEEEEEECCCSSCHHHHHHHHTTCE--EE--ETTTSCGGGHHHHSCCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHHH--cCCcEEEEEeCCcccHHHHHHHHHcCCc--cc--CCCccCHHHHHHhCCCCCEEE
Confidence 589999985 36666 6666 53 1222 323333333 45667666642 22 32221111 13699998
Q ss_pred eccccccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012961 285 CSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSP 318 (452)
Q Consensus 285 ~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p 318 (452)
-... ....+.++.++|++||.+++...
T Consensus 248 d~~g-------~~~~~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 248 EATG-------FPKHAIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp ECSC-------CHHHHHHHHHHEEEEEEEEECCC
T ss_pred ECCC-------ChHHHHHHHHHHhcCCEEEEEeC
Confidence 5431 12368889999999999998653
No 367
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=58.72 E-value=3.7 Score=39.09 Aligned_cols=89 Identities=15% Similarity=0.092 Sum_probs=49.6
Q ss_pred CCCEEEEECC--CCchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEecccc
Q 012961 215 NIRNVLDVGC--GVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCR 289 (452)
Q Consensus 215 ~~~~VLDIGC--G~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~ 289 (452)
+..+||-+|+ |.|..+..++.. .|++++. ++...+.+++.|....+...+..++.-.-+.+|+|+. ..
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~-----~~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid-~g- 197 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAAS-----RPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLE-VR- 197 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEES-----SGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEE-CS-
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeC-----CHHHHHHHHhcCCCEEEECCcchhHHHHhcCceEEEE-CC-
Confidence 3458999998 456666666652 3444433 3334455655554322211110111000046999986 42
Q ss_pred ccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 290 IDWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 290 l~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
- ..+....++|+++|.+++..
T Consensus 198 ~-------~~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 198 G-------KEVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp C-------TTHHHHHTTEEEEEEEEEC-
T ss_pred H-------HHHHHHHHhhccCCEEEEEe
Confidence 1 25788899999999998754
No 368
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=57.76 E-value=5.9 Score=38.76 Aligned_cols=90 Identities=14% Similarity=-0.004 Sum_probs=51.5
Q ss_pred CCCEEEEECC--CCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC--------CCCCCceEEE
Q 012961 215 NIRNVLDVGC--GVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP--------YPSRSFELAH 284 (452)
Q Consensus 215 ~~~~VLDIGC--G~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp--------~~d~sFDlVv 284 (452)
...+||-+|+ |.|..+..++.. .+..+...+.++...+.+++.+....+ |..... .....+|+|+
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~--~Ga~Vi~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~~~~~d~vi 236 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRM--AGAIPLVTAGSQKKLQMAEKLGAAAGF---NYKKEDFSEATLKFTKGAGVNLIL 236 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHTCSEEE---ETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHHHHcCCcEEE---ecCChHHHHHHHHHhcCCCceEEE
Confidence 3458999984 456665555542 122333334455555666665644222 221111 1124699998
Q ss_pred eccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 285 CSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 285 ~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
.... - ..+....++|++||.+++..
T Consensus 237 ~~~G-~-------~~~~~~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 237 DCIG-G-------SYWEKNVNCLALDGRWVLYG 261 (354)
T ss_dssp ESSC-G-------GGHHHHHHHEEEEEEEEECC
T ss_pred ECCC-c-------hHHHHHHHhccCCCEEEEEe
Confidence 5542 1 14677889999999999865
No 369
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=57.55 E-value=7.6 Score=38.12 Aligned_cols=93 Identities=13% Similarity=0.077 Sum_probs=55.4
Q ss_pred CCCEEEEEC--CCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC-----CCCCCceEEEecc
Q 012961 215 NIRNVLDVG--CGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP-----YPSRSFELAHCSR 287 (452)
Q Consensus 215 ~~~~VLDIG--CG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp-----~~d~sFDlVv~s~ 287 (452)
...+||-+| .|.|..+..++... +..+...+.++...+.+++.|....+ ..+..++. ...+.+|+|+...
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~~Ga~~~~-~~~~~~~~~~~~~~~~~g~D~vid~~ 239 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKA--KCHVIGTCSSDEKSAFLKSLGCDRPI-NYKTEPVGTVLKQEYPEGVDVVYESV 239 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTTCSEEE-ETTTSCHHHHHHHHCTTCEEEEEECS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHcCCcEEE-ecCChhHHHHHHHhcCCCCCEEEECC
Confidence 345899999 35677777776531 23344445556666777776644322 11111110 0124699998543
Q ss_pred ccccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012961 288 CRIDWLQRDGILLLELDRLLRPGGYFVYSSP 318 (452)
Q Consensus 288 ~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p 318 (452)
. ...+..+.++|+++|.+++...
T Consensus 240 g--------~~~~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 240 G--------GAMFDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp C--------THHHHHHHHHEEEEEEEEECCC
T ss_pred C--------HHHHHHHHHHHhcCCEEEEEeC
Confidence 2 1468889999999999988653
No 370
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=57.46 E-value=8 Score=37.59 Aligned_cols=89 Identities=13% Similarity=0.136 Sum_probs=53.7
Q ss_pred CCCEEEEECC--CCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC------CCCCCceEEEec
Q 012961 215 NIRNVLDVGC--GVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP------YPSRSFELAHCS 286 (452)
Q Consensus 215 ~~~~VLDIGC--G~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp------~~d~sFDlVv~s 286 (452)
+..+||=+|+ |.|.++..++.. .+..+... .++...+.+++.|... + . +..++. .....+|+|+-.
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~~--~Ga~Vi~~-~~~~~~~~~~~lGa~~-i-~-~~~~~~~~~~~~~~~~g~D~vid~ 223 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIALA--RGARVFAT-ARGSDLEYVRDLGATP-I-D-ASREPEDYAAEHTAGQGFDLVYDT 223 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHH--TTCEEEEE-ECHHHHHHHHHHTSEE-E-E-TTSCHHHHHHHHHTTSCEEEEEES
T ss_pred CCCEEEEecCCCHHHHHHHHHHHH--CCCEEEEE-eCHHHHHHHHHcCCCE-e-c-cCCCHHHHHHHHhcCCCceEEEEC
Confidence 4458999994 356677666653 12233333 4455567777776543 2 2 222111 112469999854
Q ss_pred cccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 287 RCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 287 ~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
.. ...+....+.|+++|.+++..
T Consensus 224 ~g--------~~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 224 LG--------GPVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp SC--------THHHHHHHHHEEEEEEEEESC
T ss_pred CC--------cHHHHHHHHHHhcCCeEEEEc
Confidence 32 146888899999999999754
No 371
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=55.86 E-value=6.6 Score=39.25 Aligned_cols=89 Identities=17% Similarity=0.149 Sum_probs=53.3
Q ss_pred CEEEEECCCCchHHHHHh-hCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEecccccccc--
Q 012961 217 RNVLDVGCGVASFGAYLL-SHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL-- 293 (452)
Q Consensus 217 ~~VLDIGCG~G~~~~~La-~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~-- 293 (452)
.+||.++-+.|.++..+. ...+..++-+- .+. +..+.+|..... ..... .+...||+|+.- +.-.
T Consensus 47 ~~~l~~n~~~g~~~~~~~~~~~~~~~~~~~----~~~-~~l~~~~~~~~~-~~~~~---~~~~~~d~v~~~---~Pk~k~ 114 (381)
T 3dmg_A 47 ERALDLNPGVGWGSLPLEGRMAVERLETSR----AAF-RCLTASGLQARL-ALPWE---AAAGAYDLVVLA---LPAGRG 114 (381)
T ss_dssp SEEEESSCTTSTTTGGGBTTBEEEEEECBH----HHH-HHHHHTTCCCEE-CCGGG---SCTTCEEEEEEE---CCGGGC
T ss_pred CcEEEecCCCCccccccCCCCceEEEeCcH----HHH-HHHHHcCCCccc-cCCcc---CCcCCCCEEEEE---CCcchh
Confidence 479999999998888776 33444442111 111 223344655532 11122 234679999732 2211
Q ss_pred -ccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 294 -QRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 294 -~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
...+..|.++.+.|+|||.+++..
T Consensus 115 ~~~~~~~l~~~~~~l~~g~~i~~~g 139 (381)
T 3dmg_A 115 TAYVQASLVAAARALRMGGRLYLAG 139 (381)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 123568899999999999999876
No 372
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=54.82 E-value=17 Score=35.54 Aligned_cols=92 Identities=14% Similarity=0.220 Sum_probs=55.9
Q ss_pred CCCEEEEEC-CC-CchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCC-C-----CCCCCCceEEEec
Q 012961 215 NIRNVLDVG-CG-VASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKR-L-----PYPSRSFELAHCS 286 (452)
Q Consensus 215 ~~~~VLDIG-CG-~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~-l-----p~~d~sFDlVv~s 286 (452)
+..+||=+| +| .|.++..+++. .-+..+...+.++...+.+++.|....+ +..+ + ....+.+|+|+-.
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~-~~g~~Vi~~~~~~~~~~~~~~lGad~vi---~~~~~~~~~v~~~~~~g~Dvvid~ 246 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQ-RTDLTVIATASRPETQEWVKSLGAHHVI---DHSKPLAAEVAALGLGAPAFVFST 246 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHH-HCCSEEEEECSSHHHHHHHHHTTCSEEE---CTTSCHHHHHHTTCSCCEEEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHHHHcCCCEEE---eCCCCHHHHHHHhcCCCceEEEEC
Confidence 445899998 44 47777777652 0123344445556666778777654322 2111 0 1123579999854
Q ss_pred cccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 287 RCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 287 ~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
.. ....+.++.++|++||.+++..
T Consensus 247 ~g-------~~~~~~~~~~~l~~~G~iv~~g 270 (363)
T 4dvj_A 247 TH-------TDKHAAEIADLIAPQGRFCLID 270 (363)
T ss_dssp SC-------HHHHHHHHHHHSCTTCEEEECS
T ss_pred CC-------chhhHHHHHHHhcCCCEEEEEC
Confidence 31 1347889999999999999864
No 373
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=54.60 E-value=6.8 Score=37.79 Aligned_cols=90 Identities=16% Similarity=0.074 Sum_probs=52.3
Q ss_pred CCCEEEEECC--CCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC--------CCCCCceEEE
Q 012961 215 NIRNVLDVGC--GVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP--------YPSRSFELAH 284 (452)
Q Consensus 215 ~~~~VLDIGC--G~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp--------~~d~sFDlVv 284 (452)
+..+||-+|+ |.|..+..++.. .+..+...+.++...+.+++.+....+ |..... .....+|+|+
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~--~G~~Vi~~~~~~~~~~~~~~~g~~~~~---d~~~~~~~~~i~~~~~~~~~d~vi 219 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARH--LGATVIGTVSTEEKAETARKLGCHHTI---NYSTQDFAEVVREITGGKGVDVVY 219 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHH--TTCEEEEEESSHHHHHHHHHHTCSEEE---ETTTSCHHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHcCCCEEE---ECCCHHHHHHHHHHhCCCCCeEEE
Confidence 4458999995 566666666542 122333334445555666655543222 222111 0123699998
Q ss_pred eccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 285 CSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 285 ~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
.+... ..+..+.++|++||.+++..
T Consensus 220 ~~~g~--------~~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 220 DSIGK--------DTLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp ECSCT--------TTHHHHHHTEEEEEEEEECC
T ss_pred ECCcH--------HHHHHHHHhhccCCEEEEEe
Confidence 55421 35788899999999998765
No 374
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=52.20 E-value=19 Score=36.44 Aligned_cols=90 Identities=12% Similarity=0.069 Sum_probs=54.3
Q ss_pred CCCEEEEECC--CCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCC-----------------
Q 012961 215 NIRNVLDVGC--GVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPY----------------- 275 (452)
Q Consensus 215 ~~~~VLDIGC--G~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~----------------- 275 (452)
++.+||=+|+ |.|.++..++.. .+..+...+.++...+.+++.|....+ +.....+
T Consensus 228 ~g~~VlV~GasG~vG~~avqlak~--~Ga~vi~~~~~~~~~~~~~~lGa~~vi---~~~~~d~~~~~~~~~~~~~~~~~~ 302 (456)
T 3krt_A 228 QGDNVLIWGASGGLGSYATQFALA--GGANPICVVSSPQKAEICRAMGAEAII---DRNAEGYRFWKDENTQDPKEWKRF 302 (456)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHHHTCCEEE---ETTTTTCCSEEETTEECHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH--cCCeEEEEECCHHHHHHHHhhCCcEEE---ecCcCcccccccccccchHHHHHH
Confidence 4458999997 356677666653 122222223456666777777754322 2111111
Q ss_pred --------CCCCceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 276 --------PSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 276 --------~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
....+|+|+-... ...+....++|++||.+++..
T Consensus 303 ~~~i~~~t~g~g~Dvvid~~G--------~~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 303 GKRIRELTGGEDIDIVFEHPG--------RETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp HHHHHHHHTSCCEEEEEECSC--------HHHHHHHHHHEEEEEEEEESC
T ss_pred HHHHHHHhCCCCCcEEEEcCC--------chhHHHHHHHhhCCcEEEEEe
Confidence 1247999985432 246888899999999999864
No 375
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=51.19 E-value=11 Score=36.62 Aligned_cols=88 Identities=6% Similarity=0.022 Sum_probs=50.2
Q ss_pred CEEEEECC--CCchHHHHHhhCCCccc-cCChhhhhHHHHHHHHH-cCCCeEEEEecCCCCC-------CCCCCceEEEe
Q 012961 217 RNVLDVGC--GVASFGAYLLSHDIIAM-SLAPNDVHENQIQFALE-RGIPSTLGVLGTKRLP-------YPSRSFELAHC 285 (452)
Q Consensus 217 ~~VLDIGC--G~G~~~~~La~~~v~~v-dis~~dis~~~~~~A~~-rg~~~~~~~~d~~~lp-------~~d~sFDlVv~ 285 (452)
.+||-+|+ |.|..+..++.. .+. .+...+.++...+.+++ .+.... .|..+.. ...+.+|+|+.
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~--~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~---~d~~~~~~~~~~~~~~~~~~d~vi~ 236 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHF--LGCSRVVGICGTHEKCILLTSELGFDAA---INYKKDNVAEQLRESCPAGVDVYFD 236 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHH--TTCSEEEEEESCHHHHHHHHHTSCCSEE---EETTTSCHHHHHHHHCTTCEEEEEE
T ss_pred cEEEEECCCcHHHHHHHHHHHH--CCCCeEEEEeCCHHHHHHHHHHcCCceE---EecCchHHHHHHHHhcCCCCCEEEE
Confidence 58999998 445555555542 122 33333444455555554 454322 2222111 01126999985
Q ss_pred ccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 286 SRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 286 s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
+.. ...+....++|++||.+++..
T Consensus 237 ~~G--------~~~~~~~~~~l~~~G~iv~~G 260 (357)
T 2zb4_A 237 NVG--------GNISDTVISQMNENSHIILCG 260 (357)
T ss_dssp SCC--------HHHHHHHHHTEEEEEEEEECC
T ss_pred CCC--------HHHHHHHHHHhccCcEEEEEC
Confidence 542 246888999999999999764
No 376
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=50.86 E-value=11 Score=38.02 Aligned_cols=92 Identities=12% Similarity=0.017 Sum_probs=53.2
Q ss_pred CCCEEEEECC--CCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC------------------
Q 012961 215 NIRNVLDVGC--GVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP------------------ 274 (452)
Q Consensus 215 ~~~~VLDIGC--G~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp------------------ 274 (452)
+..+||=+|+ |.|..+..++.. .+..+...+.++...+.+++.|....+...+. ++.
T Consensus 220 ~g~~VlV~GasG~iG~~a~qla~~--~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~ 296 (447)
T 4a0s_A 220 QGDIVLIWGASGGLGSYAIQFVKN--GGGIPVAVVSSAQKEAAVRALGCDLVINRAEL-GITDDIADDPRRVVETGRKLA 296 (447)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHHTTCCCEEEHHHH-TCCTTGGGCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHHHhcCCCEEEecccc-cccccccccccccchhhhHHH
Confidence 4458999997 346666666653 12222222345666677777665433321111 100
Q ss_pred -----CCCCCceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 275 -----YPSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 275 -----~~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
.....+|+|+-... ...+....++|++||.+++..
T Consensus 297 ~~v~~~~g~g~Dvvid~~G--------~~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 297 KLVVEKAGREPDIVFEHTG--------RVTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHSSCCSEEEECSC--------HHHHHHHHHHSCTTCEEEESC
T ss_pred HHHHHHhCCCceEEEECCC--------chHHHHHHHHHhcCCEEEEEe
Confidence 00246999985432 135788889999999999865
No 377
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=50.31 E-value=4.2 Score=39.91 Aligned_cols=90 Identities=14% Similarity=0.083 Sum_probs=47.7
Q ss_pred CCCEEEEECCC-CchHHHHHhhC---CCccccCChhhhhHHHHHHHH-HcCCCeEEEEecCCCC-CCCCCCceEEEeccc
Q 012961 215 NIRNVLDVGCG-VASFGAYLLSH---DIIAMSLAPNDVHENQIQFAL-ERGIPSTLGVLGTKRL-PYPSRSFELAHCSRC 288 (452)
Q Consensus 215 ~~~~VLDIGCG-~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~-~rg~~~~~~~~d~~~l-p~~d~sFDlVv~s~~ 288 (452)
+..+||=+|+| .|.++..++.. .|++++ .++...+.++ +.|....+...+...+ ... +.+|+|+-...
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-----~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~-~g~D~vid~~g 253 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVIS-----SSNKKREEALQDLGADDYVIGSDQAKMSELA-DSLDYVIDTVP 253 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEE-----SSTTHHHHHHTTSCCSCEEETTCHHHHHHST-TTEEEEEECCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEe-----CChHHHHHHHHHcCCceeeccccHHHHHHhc-CCCCEEEECCC
Confidence 34589999975 24555555542 344443 3444445555 4454322211110000 011 36999985432
Q ss_pred cccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 289 RIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 289 ~l~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
.- ..+....++|++||.+++..
T Consensus 254 ~~-------~~~~~~~~~l~~~G~iv~~G 275 (357)
T 2cf5_A 254 VH-------HALEPYLSLLKLDGKLILMG 275 (357)
T ss_dssp SC-------CCSHHHHTTEEEEEEEEECS
T ss_pred Ch-------HHHHHHHHHhccCCEEEEeC
Confidence 11 13567788999999999865
No 378
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=49.41 E-value=15 Score=36.01 Aligned_cols=88 Identities=15% Similarity=0.049 Sum_probs=49.2
Q ss_pred CCEEEEECCCC-chHHHHHhh---CCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCC------CCCceEEEe
Q 012961 216 IRNVLDVGCGV-ASFGAYLLS---HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYP------SRSFELAHC 285 (452)
Q Consensus 216 ~~~VLDIGCG~-G~~~~~La~---~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~------d~sFDlVv~ 285 (452)
..+||-+|+|. |..+..++. ..|++++.+.. .....+.+++.|.. .. | .+ .+. .+.+|+|+.
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~--~~~~~~~~~~~ga~--~v--~-~~-~~~~~~~~~~~~~d~vid 252 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREP--TEVEQTVIEETKTN--YY--N-SS-NGYDKLKDSVGKFDVIID 252 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCC--CHHHHHHHHHHTCE--EE--E-CT-TCSHHHHHHHCCEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCcc--chHHHHHHHHhCCc--ee--c-hH-HHHHHHHHhCCCCCEEEE
Confidence 46899999832 344444443 23444443321 00344566665542 22 3 22 221 146999986
Q ss_pred ccccccccccHHHHH-HHHHHhcCCCcEEEEEeC
Q 012961 286 SRCRIDWLQRDGILL-LELDRLLRPGGYFVYSSP 318 (452)
Q Consensus 286 s~~~l~~~~d~~~~L-~ei~RvLkPGG~lvi~~p 318 (452)
... . ...+ +.+.++|+++|.+++...
T Consensus 253 ~~g-~------~~~~~~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 253 ATG-A------DVNILGNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp CCC-C------CTHHHHHHGGGEEEEEEEEECSC
T ss_pred CCC-C------hHHHHHHHHHHHhcCCEEEEEec
Confidence 542 1 1245 889999999999998653
No 379
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=49.27 E-value=14 Score=35.72 Aligned_cols=91 Identities=14% Similarity=0.254 Sum_probs=53.2
Q ss_pred CCCEEEEEC-CC-CchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCC-C-----CCCCCCceEEEec
Q 012961 215 NIRNVLDVG-CG-VASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKR-L-----PYPSRSFELAHCS 286 (452)
Q Consensus 215 ~~~~VLDIG-CG-~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~-l-----p~~d~sFDlVv~s 286 (452)
+..+||=+| +| .|.++..++.. .+..+...+.++...+.+++.|....+ +..+ + ....+.+|+|+..
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~--~Ga~Vi~~~~~~~~~~~~~~lGa~~vi---~~~~~~~~~~~~~~~~g~Dvv~d~ 224 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKA--YGLRVITTASRNETIEWTKKMGADIVL---NHKESLLNQFKTQGIELVDYVFCT 224 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHH--TTCEEEEECCSHHHHHHHHHHTCSEEE---CTTSCHHHHHHHHTCCCEEEEEES
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHHHhcCCcEEE---ECCccHHHHHHHhCCCCccEEEEC
Confidence 345899884 44 46666666652 133444445556666777776644222 2111 0 0122469999854
Q ss_pred cccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 287 RCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 287 ~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
.. ....+..+.++|+++|.++...
T Consensus 225 ~g-------~~~~~~~~~~~l~~~G~iv~~~ 248 (346)
T 3fbg_A 225 FN-------TDMYYDDMIQLVKPRGHIATIV 248 (346)
T ss_dssp SC-------HHHHHHHHHHHEEEEEEEEESS
T ss_pred CC-------chHHHHHHHHHhccCCEEEEEC
Confidence 31 1346788999999999997643
No 380
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=47.90 E-value=20 Score=34.55 Aligned_cols=96 Identities=13% Similarity=0.126 Sum_probs=53.4
Q ss_pred CCCEEEEECCCCc-hHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCC---C-C-CCCCCceEEEeccc
Q 012961 215 NIRNVLDVGCGVA-SFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKR---L-P-YPSRSFELAHCSRC 288 (452)
Q Consensus 215 ~~~~VLDIGCG~G-~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~---l-p-~~d~sFDlVv~s~~ 288 (452)
+..+||=+|+|.+ .++..++.. ..+..+...+.++...+.+++.|....+...+... + . .....+|.++...
T Consensus 163 ~g~~VlV~GaG~~g~~a~~~a~~-~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g~g~d~~~~~~- 240 (348)
T 4eez_A 163 PGDWQVIFGAGGLGNLAIQYAKN-VFGAKVIAVDINQDKLNLAKKIGADVTINSGDVNPVDEIKKITGGLGVQSAIVCA- 240 (348)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-TSCCEEEEEESCHHHHHHHHHTTCSEEEEC-CCCHHHHHHHHTTSSCEEEEEECC-
T ss_pred CCCEEEEEcCCCccHHHHHHHHH-hCCCEEEEEECcHHHhhhhhhcCCeEEEeCCCCCHHHHhhhhcCCCCceEEEEec-
Confidence 3458999999864 344444431 11333344455666677888777654332211100 0 0 1123466665322
Q ss_pred cccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012961 289 RIDWLQRDGILLLELDRLLRPGGYFVYSSP 318 (452)
Q Consensus 289 ~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p 318 (452)
. ....+....++|+++|.+++...
T Consensus 241 -~-----~~~~~~~~~~~l~~~G~~v~~g~ 264 (348)
T 4eez_A 241 -V-----ARIAFEQAVASLKPMGKMVAVAV 264 (348)
T ss_dssp -S-----CHHHHHHHHHTEEEEEEEEECCC
T ss_pred -c-----CcchhheeheeecCCceEEEEec
Confidence 1 13578889999999999987653
No 381
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=47.37 E-value=20 Score=34.62 Aligned_cols=40 Identities=15% Similarity=0.095 Sum_probs=28.0
Q ss_pred CCCEEEEECCCCchHHHHHhh--CCCccccCChhhhhHHHHHHHHHc
Q 012961 215 NIRNVLDVGCGVASFGAYLLS--HDIIAMSLAPNDVHENQIQFALER 259 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~--~~v~~vdis~~dis~~~~~~A~~r 259 (452)
++..|||--||+|+.+..... +..+++|+. +...+.+++|
T Consensus 252 ~~~~VlDpF~GsGtt~~aa~~~gr~~ig~e~~-----~~~~~~~~~r 293 (323)
T 1boo_A 252 PDDLVVDIFGGSNTTGLVAERESRKWISFEMK-----PEYVAASAFR 293 (323)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCEEEEEESC-----HHHHHHHHGG
T ss_pred CCCEEEECCCCCCHHHHHHHHcCCCEEEEeCC-----HHHHHHHHHH
Confidence 345899999999998777664 455666554 4555666666
No 382
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=47.25 E-value=8.1 Score=37.48 Aligned_cols=89 Identities=15% Similarity=0.095 Sum_probs=48.9
Q ss_pred CCEEEEECCCC-chHHHHHhhCCCccc-cCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCC-------CCCCceEEEec
Q 012961 216 IRNVLDVGCGV-ASFGAYLLSHDIIAM-SLAPNDVHENQIQFALERGIPSTLGVLGTKRLPY-------PSRSFELAHCS 286 (452)
Q Consensus 216 ~~~VLDIGCG~-G~~~~~La~~~v~~v-dis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~-------~d~sFDlVv~s 286 (452)
..+||-+|+|. |.++..++.. .+. .+...+.++...+.+++. +.. +.+.....+ ....+|+|+-.
T Consensus 165 g~~VlV~GaG~vG~~~~q~a~~--~Ga~~Vi~~~~~~~~~~~~~~l---a~~-v~~~~~~~~~~~~~~~~~~g~D~vid~ 238 (343)
T 2dq4_A 165 GKSVLITGAGPIGLMAAMVVRA--SGAGPILVSDPNPYRLAFARPY---ADR-LVNPLEEDLLEVVRRVTGSGVEVLLEF 238 (343)
T ss_dssp TSCEEEECCSHHHHHHHHHHHH--TTCCSEEEECSCHHHHGGGTTT---CSE-EECTTTSCHHHHHHHHHSSCEEEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHH--cCCCEEEEECCCHHHHHHHHHh---HHh-ccCcCccCHHHHHHHhcCCCCCEEEEC
Confidence 34799999853 5555555542 122 233334444444555432 221 122221111 02469999854
Q ss_pred cccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 287 RCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 287 ~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
... ...++...++|+++|.+++..
T Consensus 239 ~g~-------~~~~~~~~~~l~~~G~iv~~g 262 (343)
T 2dq4_A 239 SGN-------EAAIHQGLMALIPGGEARILG 262 (343)
T ss_dssp SCC-------HHHHHHHHHHEEEEEEEEECC
T ss_pred CCC-------HHHHHHHHHHHhcCCEEEEEe
Confidence 321 246888999999999998765
No 383
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=46.28 E-value=8.9 Score=37.41 Aligned_cols=90 Identities=9% Similarity=0.038 Sum_probs=53.7
Q ss_pred CCCEEEEECC--CCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCC-------CCCCceEEEe
Q 012961 215 NIRNVLDVGC--GVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPY-------PSRSFELAHC 285 (452)
Q Consensus 215 ~~~~VLDIGC--G~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~-------~d~sFDlVv~ 285 (452)
+..+||=+|+ |.|..+..++.. .+..+...+.++...+.+++.|....+ +.....+ ..+.+|+|+.
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~--~Ga~Vi~~~~~~~~~~~~~~lGa~~~~---~~~~~~~~~~~~~~~~~g~Dvvid 241 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARA--FGAEVYATAGSTGKCEACERLGAKRGI---NYRSEDFAAVIKAETGQGVDIILD 241 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHHHTCSEEE---ETTTSCHHHHHHHHHSSCEEEEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHH--cCCEEEEEeCCHHHHHHHHhcCCCEEE---eCCchHHHHHHHHHhCCCceEEEE
Confidence 4458999953 356666666653 133344445556666777776654322 2211111 0246999986
Q ss_pred ccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 286 SRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 286 s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
... - ..+....+.|++||.+++..
T Consensus 242 ~~g-~-------~~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 242 MIG-A-------AYFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp SCC-G-------GGHHHHHHTEEEEEEEEECC
T ss_pred CCC-H-------HHHHHHHHHhccCCEEEEEE
Confidence 542 1 25778889999999998765
No 384
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=44.77 E-value=18 Score=36.26 Aligned_cols=43 Identities=12% Similarity=0.137 Sum_probs=30.8
Q ss_pred CCCCEEEEECCCCchHHHHHh-h-----CCCccccCChhhhhHHHHHHH
Q 012961 214 GNIRNVLDVGCGVASFGAYLL-S-----HDIIAMSLAPNDVHENQIQFA 256 (452)
Q Consensus 214 ~~~~~VLDIGCG~G~~~~~La-~-----~~v~~vdis~~dis~~~~~~A 256 (452)
.+..+++|||++.|.++..++ . ..|++++..+........+.+
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~ 273 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLR 273 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHH
Confidence 345689999999999998876 2 357888887766554443343
No 385
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=44.66 E-value=6.6 Score=38.63 Aligned_cols=90 Identities=17% Similarity=0.134 Sum_probs=46.2
Q ss_pred CCCEEEEECCCC-chHHHHHhhC---CCccccCChhhhhHHHHHHHH-HcCCCeEEEEecCCCC-CCCCCCceEEEeccc
Q 012961 215 NIRNVLDVGCGV-ASFGAYLLSH---DIIAMSLAPNDVHENQIQFAL-ERGIPSTLGVLGTKRL-PYPSRSFELAHCSRC 288 (452)
Q Consensus 215 ~~~~VLDIGCG~-G~~~~~La~~---~v~~vdis~~dis~~~~~~A~-~rg~~~~~~~~d~~~l-p~~d~sFDlVv~s~~ 288 (452)
+..+||=+|+|. |.++..++.. .|++++. ++...+.++ +.|....+...+...+ ... +.+|+|+....
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~-----~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~-~~~D~vid~~g 260 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVIST-----SPSKKEEALKNFGADSFLVSRDQEQMQAAA-GTLDGIIDTVS 260 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEES-----CGGGHHHHHHTSCCSEEEETTCHHHHHHTT-TCEEEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeC-----CHHHHHHHHHhcCCceEEeccCHHHHHHhh-CCCCEEEECCC
Confidence 345899999752 4455555542 3344433 333344544 4443322111110001 011 36999985432
Q ss_pred cccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 289 RIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 289 ~l~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
.- ..++...++|+++|.++...
T Consensus 261 ~~-------~~~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 261 AV-------HPLLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp SC-------CCSHHHHHHEEEEEEEEECC
T ss_pred cH-------HHHHHHHHHHhcCCEEEEEc
Confidence 11 13566778999999998764
No 386
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=43.70 E-value=16 Score=35.01 Aligned_cols=91 Identities=14% Similarity=0.074 Sum_probs=50.5
Q ss_pred CCCEEEEEC-CC-CchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCC-CCCCCCCceEEEecccccc
Q 012961 215 NIRNVLDVG-CG-VASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKR-LPYPSRSFELAHCSRCRID 291 (452)
Q Consensus 215 ~~~~VLDIG-CG-~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~-lp~~d~sFDlVv~s~~~l~ 291 (452)
+..+||=+| +| .|.++..+++. .+..+.... +....+.+++.|....+. ....+ +.-.-..+|+|+-.-.
T Consensus 152 ~g~~vlV~Ga~G~vG~~a~q~a~~--~Ga~vi~~~-~~~~~~~~~~lGa~~~i~-~~~~~~~~~~~~g~D~v~d~~g--- 224 (321)
T 3tqh_A 152 QGDVVLIHAGAGGVGHLAIQLAKQ--KGTTVITTA-SKRNHAFLKALGAEQCIN-YHEEDFLLAISTPVDAVIDLVG--- 224 (321)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHH--TTCEEEEEE-CHHHHHHHHHHTCSEEEE-TTTSCHHHHCCSCEEEEEESSC---
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHH--cCCEEEEEe-ccchHHHHHHcCCCEEEe-CCCcchhhhhccCCCEEEECCC---
Confidence 445899886 44 57777777653 122222222 233356777777543221 11111 1101146999985431
Q ss_pred ccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 292 WLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 292 ~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
...+....++|++||.++...
T Consensus 225 -----~~~~~~~~~~l~~~G~iv~~g 245 (321)
T 3tqh_A 225 -----GDVGIQSIDCLKETGCIVSVP 245 (321)
T ss_dssp -----HHHHHHHGGGEEEEEEEEECC
T ss_pred -----cHHHHHHHHhccCCCEEEEeC
Confidence 123488899999999999754
No 387
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=41.26 E-value=23 Score=34.67 Aligned_cols=89 Identities=19% Similarity=0.149 Sum_probs=52.4
Q ss_pred CCCEEEEECCC--CchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCC-----CCCCCCceEEE
Q 012961 215 NIRNVLDVGCG--VASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRL-----PYPSRSFELAH 284 (452)
Q Consensus 215 ~~~~VLDIGCG--~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~l-----p~~d~sFDlVv 284 (452)
++.+||=+|++ .|.++..+++. .|+++ .++...+.+++.|....+. ....++ ...++.+|+|+
T Consensus 164 ~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~------~~~~~~~~~~~lGa~~vi~-~~~~~~~~~v~~~t~g~~d~v~ 236 (371)
T 3gqv_A 164 KPVYVLVYGGSTATATVTMQMLRLSGYIPIAT------CSPHNFDLAKSRGAEEVFD-YRAPNLAQTIRTYTKNNLRYAL 236 (371)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTCEEEEE------ECGGGHHHHHHTTCSEEEE-TTSTTHHHHHHHHTTTCCCEEE
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEE------eCHHHHHHHHHcCCcEEEE-CCCchHHHHHHHHccCCccEEE
Confidence 45689999983 67777777763 33333 1344456777777543221 111111 01124599998
Q ss_pred eccccccccccHHHHHHHHHHhc-CCCcEEEEEe
Q 012961 285 CSRCRIDWLQRDGILLLELDRLL-RPGGYFVYSS 317 (452)
Q Consensus 285 ~s~~~l~~~~d~~~~L~ei~RvL-kPGG~lvi~~ 317 (452)
-.-. ....+..+.+.| ++||++++..
T Consensus 237 d~~g-------~~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 237 DCIT-------NVESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp ESSC-------SHHHHHHHHHHSCTTCEEEEESS
T ss_pred ECCC-------chHHHHHHHHHhhcCCCEEEEEe
Confidence 5331 124678888889 6999998754
No 388
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=38.23 E-value=2.8e+02 Score=26.77 Aligned_cols=139 Identities=10% Similarity=0.083 Sum_probs=76.0
Q ss_pred CCEEEEECCCCchHHHHHhhC---CCccccCChhhhhHHHHHHHHH------------------------cCCCeEEEEe
Q 012961 216 IRNVLDVGCGVASFGAYLLSH---DIIAMSLAPNDVHENQIQFALE------------------------RGIPSTLGVL 268 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~------------------------rg~~~~~~~~ 268 (452)
...|+-+|||.=.....|... .+.-++++-.++-....+...+ ...+..++-.
T Consensus 91 ~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v~~ 170 (334)
T 3iei_A 91 HCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDFPMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVIGA 170 (334)
T ss_dssp CSEEEEETCTTCCHHHHHHHTTCCCSEEEEEECHHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEEEC
T ss_pred CCEEEEeCCCcCchHHHhcCCCCCCCeEEECCcHHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEEcc
Confidence 457999999998888777653 3333333322222222122111 0223456666
Q ss_pred cCCCC----------CCCCCCceEEEeccccccccccH--HHHHHHHHHhcCCCcEEEEEeCCCCCCChhhH--------
Q 012961 269 GTKRL----------PYPSRSFELAHCSRCRIDWLQRD--GILLLELDRLLRPGGYFVYSSPEAYAHDPENR-------- 328 (452)
Q Consensus 269 d~~~l----------p~~d~sFDlVv~s~~~l~~~~d~--~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~-------- 328 (452)
|+.++ .+.... -.++.+.+++.|++.. ..+|+.+.+... +|.+++..+... .++...
T Consensus 171 DL~d~~~l~~~L~~~g~d~~~-Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f~-~~~~i~yE~i~p-~d~fg~~M~~~l~~ 247 (334)
T 3iei_A 171 DLRDLSELEEKLKKCNMNTQL-PTLLIAECVLVYMTPEQSANLLKWAANSFE-RAMFINYEQVNM-GDRFGQIMIENLRR 247 (334)
T ss_dssp CTTCHHHHHHHHHHTTCCTTS-CEEEEEESCGGGSCHHHHHHHHHHHHHHCS-SEEEEEEEECCT-TSHHHHHHHHHHHT
T ss_pred ccccchhHHHHHHhcCCCCCC-CEEEEEchhhhCCCHHHHHHHHHHHHHhCC-CceEEEEeccCC-CCHHHHHHHHHHHH
Confidence 76542 122222 3444566788887544 558888887764 555555443211 111110
Q ss_pred -----------HHHHHHHHHHHhCCCEEEEEEeceeEeec
Q 012961 329 -----------RIWNAMYDLLKSMCWKIVSKKDQTVIWAK 357 (452)
Q Consensus 329 -----------~~~~~l~~ll~~~Gf~~v~~~~~~~iw~k 357 (452)
..-++..+.+.+.||+.+...+...+|..
T Consensus 248 ~g~pl~sl~~y~t~~~~~~r~~~~Gw~~~~~~d~~~~~~~ 287 (334)
T 3iei_A 248 RQCDLAGVETCKSLESQKERLLSNGWETASAVDMMELYNR 287 (334)
T ss_dssp TTCCCTTGGGGGCHHHHHHHHHTTTCSEEEEEEHHHHHHT
T ss_pred hCCCCcccccCCCHHHHHHHHHHcCCCcceeecHHHHHHh
Confidence 11245677788999998877777667743
No 389
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=38.13 E-value=2.2e+02 Score=32.06 Aligned_cols=129 Identities=15% Similarity=0.100 Sum_probs=67.4
Q ss_pred CCCEEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCC-----------------CCCCCC
Q 012961 215 NIRNVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTK-----------------RLPYPS 277 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~-----------------~lp~~d 277 (452)
..-++||+=||.|.++.-|.++.+. --+...|+.+.+.+.-+.+.....+...|+. .+|. .
T Consensus 539 ~~l~~iDLFaG~GGlslGl~~AG~~-~vv~avEid~~A~~ty~~N~p~~~~~~~DI~~l~~~~~~~di~~~~~~~lp~-~ 616 (1002)
T 3swr_A 539 PKLRTLDVFSGCGGLSEGFHQAGIS-DTLWAIEMWDPAAQAFRLNNPGSTVFTEDCNILLKLVMAGETTNSRGQRLPQ-K 616 (1002)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHTSE-EEEEEECSSHHHHHHHHHHCTTSEEECSCHHHHHHHHHHTCSBCTTCCBCCC-T
T ss_pred CCCeEEEeccCccHHHHHHHHCCCC-ceEEEEECCHHHHHHHHHhCCCCccccccHHHHhhhccchhhhhhhhhhccc-C
Confidence 3458999999999998888765320 0122334445544444444444555444421 1222 2
Q ss_pred CCceEEEecc-----cccccc-----ccH-HHH---HHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCC
Q 012961 278 RSFELAHCSR-----CRIDWL-----QRD-GIL---LLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCW 343 (452)
Q Consensus 278 ~sFDlVv~s~-----~~l~~~-----~d~-~~~---L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf 343 (452)
+.+|+|+... +...-. .+. ..+ +.++.+.++|.-+++=-++..... .....+..+...+.++||
T Consensus 617 ~~vDll~GGpPCQ~FS~ag~~~~~~~~d~R~~L~~~~~riv~~~rPk~~llENV~glls~--~~~~~~~~i~~~L~~lGY 694 (1002)
T 3swr_A 617 GDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSF--KRSMVLKLTLRCLVRMGY 694 (1002)
T ss_dssp TTCSEEEECCCCTTCCSSSCCCHHHHHHHTTSHHHHHHHHHHHHCCSEEEEEEEGGGGTT--GGGHHHHHHHHHHHHHTC
T ss_pred CCeeEEEEcCCCcchhhhCCCCCCcccchhhHHHHHHHHHHHHhCCCEEEEeccHHHhcc--CcchHHHHHHHHHHhcCC
Confidence 4699998642 111110 111 112 334555668865444333332211 122357788888899999
Q ss_pred EEEE
Q 012961 344 KIVS 347 (452)
Q Consensus 344 ~~v~ 347 (452)
.+..
T Consensus 695 ~v~~ 698 (1002)
T 3swr_A 695 QCTF 698 (1002)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 8644
No 390
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=36.56 E-value=76 Score=25.59 Aligned_cols=55 Identities=15% Similarity=0.180 Sum_probs=32.3
Q ss_pred EEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEecc
Q 012961 218 NVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSR 287 (452)
Q Consensus 218 ~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~ 287 (452)
+||= -||+|.-+..|+. ....+.+.+.+..+.+...+..+++-....+|+|++..
T Consensus 23 kIlv-vC~sG~gTS~ll~--------------~kl~~~~~~~gi~~~V~~~~~~~~~~~~~~~DlIist~ 77 (113)
T 1tvm_A 23 KIIV-ACGGAVATSTMAA--------------EEIKELCQSHNIPVELIQCRVNEIETYMDGVHLICTTA 77 (113)
T ss_dssp EEEE-ESCSCSSHHHHHH--------------HHHHHHHHHTTCCEEEEEECTTTTTTSTTSCSEEEESS
T ss_pred EEEE-ECCCCHHHHHHHH--------------HHHHHHHHHcCCeEEEEEecHHHHhhccCCCCEEEECC
Confidence 4543 4777765555432 12234556677777666667666653334689998754
No 391
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=36.54 E-value=1.6e+02 Score=23.96 Aligned_cols=92 Identities=15% Similarity=0.085 Sum_probs=48.1
Q ss_pred CEEEEECCCC-ch-HHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC----CCCCCceEEEeccccc
Q 012961 217 RNVLDVGCGV-AS-FGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP----YPSRSFELAHCSRCRI 290 (452)
Q Consensus 217 ~~VLDIGCG~-G~-~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp----~~d~sFDlVv~s~~~l 290 (452)
.+|+=+|||. |. ++..|.+. +.++...|.++..++.+++.+ +.+..+|..+.. ..-..+|+|++...
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~---g~~v~vid~~~~~~~~~~~~g--~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~-- 80 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLAS---DIPLVVIETSRTRVDELRERG--VRAVLGNAANEEIMQLAHLECAKWLILTIP-- 80 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT---TCCEEEEESCHHHHHHHHHTT--CEEEESCTTSHHHHHHTTGGGCSEEEECCS--
T ss_pred CCEEEECcCHHHHHHHHHHHHC---CCCEEEEECCHHHHHHHHHcC--CCEEECCCCCHHHHHhcCcccCCEEEEECC--
Confidence 3688898864 32 22333332 233333344555556666554 445666653321 11246898885431
Q ss_pred cccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 291 DWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 291 ~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
- ......+....+.+.|+..++...
T Consensus 81 -~-~~~n~~~~~~a~~~~~~~~iiar~ 105 (140)
T 3fwz_A 81 -N-GYEAGEIVASARAKNPDIEIIARA 105 (140)
T ss_dssp -C-HHHHHHHHHHHHHHCSSSEEEEEE
T ss_pred -C-hHHHHHHHHHHHHHCCCCeEEEEE
Confidence 1 111223455677788888877644
No 392
>3arc_J Photosystem II reaction center protein J; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_J* 3a0b_J* 3a0h_J* 2axt_J* 3bz1_J* 3bz2_J* 3kzi_J* 3prq_J* 3prr_J*
Probab=36.22 E-value=44 Score=22.14 Aligned_cols=20 Identities=15% Similarity=0.373 Sum_probs=11.2
Q ss_pred HHHHHHHHHHHHHHHHHhcc
Q 012961 16 TYVLLGLISVLGLVCLYYGS 35 (452)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~ 35 (452)
+-.+..++++..+..||+|+
T Consensus 13 vgtv~G~~vi~~~giFfyGs 32 (40)
T 3arc_J 13 VATVAGMGVIVIVGLFFYGA 32 (40)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred eeeehhhhhhheeeEEEeec
Confidence 33444455555556677777
No 393
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=35.30 E-value=24 Score=22.72 Aligned_cols=8 Identities=13% Similarity=0.571 Sum_probs=3.5
Q ss_pred HHHHHhcc
Q 012961 28 LVCLYYGS 35 (452)
Q Consensus 28 ~~~~~~~~ 35 (452)
.+|+.+|+
T Consensus 18 vif~~lg~ 25 (40)
T 2l9u_A 18 VIFMMLGG 25 (40)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhCc
Confidence 34444444
No 394
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=35.01 E-value=48 Score=31.69 Aligned_cols=92 Identities=13% Similarity=0.097 Sum_probs=53.5
Q ss_pred CCCEEEEECCCC-chHHHHHhhCCCccc-cCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCC--------CCCCceEEE
Q 012961 215 NIRNVLDVGCGV-ASFGAYLLSHDIIAM-SLAPNDVHENQIQFALERGIPSTLGVLGTKRLPY--------PSRSFELAH 284 (452)
Q Consensus 215 ~~~~VLDIGCG~-G~~~~~La~~~v~~v-dis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~--------~d~sFDlVv 284 (452)
+..+||=+|+|. |.++..++... +. .+...+.++...+.+++.|....+. ..+... ....+|+|+
T Consensus 160 ~g~~VlV~GaG~vG~~aiq~ak~~--G~~~vi~~~~~~~k~~~a~~lGa~~~i~---~~~~~~~~~~~~~~~~~g~d~v~ 234 (346)
T 4a2c_A 160 ENKNVIIIGAGTIGLLAIQCAVAL--GAKSVTAIDISSEKLALAKSFGAMQTFN---SSEMSAPQMQSVLRELRFNQLIL 234 (346)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTTCSEEEE---TTTSCHHHHHHHHGGGCSSEEEE
T ss_pred CCCEEEEECCCCcchHHHHHHHHc--CCcEEEEEechHHHHHHHHHcCCeEEEe---CCCCCHHHHHHhhcccCCccccc
Confidence 455899999874 44555555421 11 1122345566678888877554332 221111 124578887
Q ss_pred eccccccccccHHHHHHHHHHhcCCCcEEEEEeC
Q 012961 285 CSRCRIDWLQRDGILLLELDRLLRPGGYFVYSSP 318 (452)
Q Consensus 285 ~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~p 318 (452)
.... ....+....++|++||.+++...
T Consensus 235 d~~G-------~~~~~~~~~~~l~~~G~~v~~g~ 261 (346)
T 4a2c_A 235 ETAG-------VPQTVELAVEIAGPHAQLALVGT 261 (346)
T ss_dssp ECSC-------SHHHHHHHHHHCCTTCEEEECCC
T ss_pred cccc-------ccchhhhhhheecCCeEEEEEec
Confidence 4331 13468888999999999998653
No 395
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=32.06 E-value=40 Score=32.59 Aligned_cols=57 Identities=23% Similarity=0.135 Sum_probs=35.5
Q ss_pred HHHHHHHHHHhcCCCCccCCCCCCCEEEEECCCCchHHHHHhh--CCCccccCChhhhhHHHHHHHHHcC
Q 012961 193 DKYILALARMLKFPSDKLNNGGNIRNVLDVGCGVASFGAYLLS--HDIIAMSLAPNDVHENQIQFALERG 260 (452)
Q Consensus 193 ~~y~~~l~~~l~~~~~~l~~~~~~~~VLDIGCG~G~~~~~La~--~~v~~vdis~~dis~~~~~~A~~rg 260 (452)
....+.+.+... .+...|||--||+|+.+..... +..+++|+.+. . ....+.+++|-
T Consensus 229 ~~l~~~~i~~~~---------~~~~~vlDpF~GsGtt~~aa~~~~r~~ig~e~~~~-~-~~~~~~~~~Rl 287 (319)
T 1eg2_A 229 AAVIERLVRALS---------HPGSTVLDFFAGSGVTARVAIQEGRNSICTDAAPV-F-KEYYQKQLTFL 287 (319)
T ss_dssp HHHHHHHHHHHS---------CTTCEEEETTCTTCHHHHHHHHHTCEEEEEESSTH-H-HHHHHHHHHHC
T ss_pred HHHHHHHHHHhC---------CCCCEEEecCCCCCHHHHHHHHcCCcEEEEECCcc-H-HHHHHHHHHHH
Confidence 445555555443 2345899999999987776654 56777877661 0 13445666553
No 396
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=31.70 E-value=1.2e+02 Score=29.17 Aligned_cols=93 Identities=18% Similarity=0.048 Sum_probs=49.3
Q ss_pred CCCEEEEECC--CCchHHHHHhhC---CCccc-cCChhhhhHHHHHHHHHcCCCeEEEEe-----cCCCCCCCCCCceEE
Q 012961 215 NIRNVLDVGC--GVASFGAYLLSH---DIIAM-SLAPNDVHENQIQFALERGIPSTLGVL-----GTKRLPYPSRSFELA 283 (452)
Q Consensus 215 ~~~~VLDIGC--G~G~~~~~La~~---~v~~v-dis~~dis~~~~~~A~~rg~~~~~~~~-----d~~~lp~~d~sFDlV 283 (452)
++.+||=+|+ |.|.++..+++. .++++ +... -.....+.+++.|....+... +...+.-..+.+|+|
T Consensus 167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~--~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~~Dvv 244 (357)
T 1zsy_A 167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRP--DIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQPRLA 244 (357)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCS--CHHHHHHHHHHTTCSEEEEHHHHHSGGGGGTTSSSCCCSEE
T ss_pred CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCcc--chHHHHHHHHhcCCcEEEecCcchHHHHHHHHhCCCCceEE
Confidence 3458999997 467777777752 22222 2111 122334566666654322211 111111111148998
Q ss_pred EeccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 284 HCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 284 v~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
+-.-. ...+.+..++|++||.+++..
T Consensus 245 id~~g--------~~~~~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 245 LNCVG--------GKSSTELLRQLARGGTMVTYG 270 (357)
T ss_dssp EESSC--------HHHHHHHHTTSCTTCEEEECC
T ss_pred EECCC--------cHHHHHHHHhhCCCCEEEEEe
Confidence 74431 122346789999999999864
No 397
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=31.28 E-value=1.2e+02 Score=32.20 Aligned_cols=138 Identities=10% Similarity=0.167 Sum_probs=75.0
Q ss_pred CCEEEEECCCCchHHHHHhhC----------CCccccCChhhhhHHHHHHHHHc-------C------------------
Q 012961 216 IRNVLDVGCGVASFGAYLLSH----------DIIAMSLAPNDVHENQIQFALER-------G------------------ 260 (452)
Q Consensus 216 ~~~VLDIGCG~G~~~~~La~~----------~v~~vdis~~dis~~~~~~A~~r-------g------------------ 260 (452)
...|+-+|||.=.....|... .+.-+|++-.++-+...+..++. +
T Consensus 108 ~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~p~v~~~K~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~s 187 (695)
T 2zwa_A 108 KIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDYSDLLKIKIELIKTIPELSKIIGLSEDKDYVDDSNVDFLTT 187 (695)
T ss_dssp EEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEECHHHHHHHHHHHHHCHHHHHHTTCCSSCSSCSCTTCCCEEC
T ss_pred CcEEEEcccccCcceeeeeccCcccccccCCCCEEEECccHHHHHHHHHHHHcChHHHHhhccccccccccccccccccC
Confidence 458999999998888888543 23333333222222222222211 1
Q ss_pred CCeEEEEecCCCCC----------CCCCCceEEEeccccccccccH--HHHHHHHHHhcCCCcEEEEEeCCCC--CCChh
Q 012961 261 IPSTLGVLGTKRLP----------YPSRSFELAHCSRCRIDWLQRD--GILLLELDRLLRPGGYFVYSSPEAY--AHDPE 326 (452)
Q Consensus 261 ~~~~~~~~d~~~lp----------~~d~sFDlVv~s~~~l~~~~d~--~~~L~ei~RvLkPGG~lvi~~p~~~--~~~~~ 326 (452)
.+..++-.|+.++. +.+..--.++.+.+++.|++.. ..+|+.+.+ + ++|.+++...-.. ..+..
T Consensus 188 ~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~~-~-~~~~~~~~e~~~~~~~~d~f 265 (695)
T 2zwa_A 188 PKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATSK-M-ENSHFIILEQLIPKGPFEPF 265 (695)
T ss_dssp SSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHHT-S-SSEEEEEEEECCTTCTTSHH
T ss_pred CCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHhh-C-CCceEEEEEeecCCCCCChH
Confidence 14556667765531 1022333455677788887554 557887775 4 6777666442111 01111
Q ss_pred h---HH----------------HHHHHHHHHHhCCCEEEEEEeceeEe
Q 012961 327 N---RR----------------IWNAMYDLLKSMCWKIVSKKDQTVIW 355 (452)
Q Consensus 327 ~---~~----------------~~~~l~~ll~~~Gf~~v~~~~~~~iw 355 (452)
. .. ..++..+.+.+.||..+...+...+|
T Consensus 266 ~~~m~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~Gw~~v~~~~~~~~y 313 (695)
T 2zwa_A 266 SKQMLAHFKRNDSPLQSVLKYNTIESQVQRFNKLGFAYVNVGDMFQLW 313 (695)
T ss_dssp HHHHHHHHHHTTCCCCGGGTCCSHHHHHHHHHHTTCCEEEEEEHHHHH
T ss_pred HHHHHHHHHHcCCCCCccccCCCHHHHHHHHHHCCCCCcceeeHHHHH
Confidence 0 01 12467788889999887777665555
No 398
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=30.67 E-value=1.2e+02 Score=24.37 Aligned_cols=77 Identities=12% Similarity=-0.036 Sum_probs=44.7
Q ss_pred EEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEeccccccccccHH
Q 012961 218 NVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQRDG 297 (452)
Q Consensus 218 ~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~~d~~ 297 (452)
+||=+ |+.|..+..|++ .+.+.|.+++.++.+...+...+.-....||+|+..-- +.
T Consensus 8 kIlL~-C~aGmSTsllv~---------------km~~~a~~~gi~v~i~a~~~~~~~~~~~~~DvvLLgPQ-V~------ 64 (108)
T 3nbm_A 8 KVLVL-CAGSGTSAQLAN---------------AINEGANLTEVRVIANSGAYGAHYDIMGVYDLIILAPQ-VR------ 64 (108)
T ss_dssp EEEEE-ESSSSHHHHHHH---------------HHHHHHHHHTCSEEEEEEETTSCTTTGGGCSEEEECGG-GG------
T ss_pred eEEEE-CCCCCCHHHHHH---------------HHHHHHHHCCCceEEEEcchHHHHhhccCCCEEEEChH-HH------
Confidence 56633 666655554544 23466778888887765444444322245999986541 22
Q ss_pred HHHHHHHHhcCCCcEEEEEe
Q 012961 298 ILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 298 ~~L~ei~RvLkPGG~lvi~~ 317 (452)
-.+.++.....+-|.=+.+.
T Consensus 65 y~~~~ik~~~~~~~ipV~vI 84 (108)
T 3nbm_A 65 SYYREMKVDAERLGIQIVAT 84 (108)
T ss_dssp GGHHHHHHHHTTTTCEEEEC
T ss_pred HHHHHHHHHhhhcCCcEEEe
Confidence 24666777777766655443
No 399
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=29.69 E-value=1e+02 Score=28.68 Aligned_cols=102 Identities=13% Similarity=0.052 Sum_probs=54.3
Q ss_pred CCEEEEECCCCc---hHHHHHhhC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC-----CC-----CCCc
Q 012961 216 IRNVLDVGCGVA---SFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP-----YP-----SRSF 280 (452)
Q Consensus 216 ~~~VLDIGCG~G---~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp-----~~-----d~sF 280 (452)
.+++|=.|++.| .++..|++. .|+.++.......+...+...+.+..+.+...|..+.. +. -+..
T Consensus 47 gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 126 (291)
T 3ijr_A 47 GKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSL 126 (291)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSSC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 458999998765 234444443 34444444332222333333444667777878865432 00 1368
Q ss_pred eEEEeccccccc---c-----ccHH-----------HHHHHHHHhcCCCcEEEEEe
Q 012961 281 ELAHCSRCRIDW---L-----QRDG-----------ILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 281 DlVv~s~~~l~~---~-----~d~~-----------~~L~ei~RvLkPGG~lvi~~ 317 (452)
|+++.+...... . ++.. .+++.+.+.++.+|.++...
T Consensus 127 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~is 182 (291)
T 3ijr_A 127 NILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTA 182 (291)
T ss_dssp CEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred CEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEe
Confidence 988865322211 0 0111 15566777788889888765
No 400
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=28.06 E-value=10 Score=37.71 Aligned_cols=100 Identities=11% Similarity=0.062 Sum_probs=47.3
Q ss_pred CCCEEEEECCCCchHHHHHhhC-CCccccCChhhhhHHHHHHHHH-cCCCeEEEEecCCCCCCCCCCceEEEeccccccc
Q 012961 215 NIRNVLDVGCGVASFGAYLLSH-DIIAMSLAPNDVHENQIQFALE-RGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDW 292 (452)
Q Consensus 215 ~~~~VLDIGCG~G~~~~~La~~-~v~~vdis~~dis~~~~~~A~~-rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~ 292 (452)
.+.+|+=+|+| .++..+++. .-.++++...|.+....+.+.+ .+..+.....+...+.-.-..+|+|+.... ...
T Consensus 167 ~g~~V~ViG~G--~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~-~p~ 243 (377)
T 2vhw_A 167 EPADVVVIGAG--TAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVL-VPG 243 (377)
T ss_dssp CCCEEEEECCS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCC-CTT
T ss_pred CCCEEEEECCC--HHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCC-cCC
Confidence 45689999985 444433320 0012334444445554444444 343332221111111000024799986321 111
Q ss_pred cccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 293 LQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 293 ~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
...+..+.++..+.+||||.++...
T Consensus 244 ~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 244 AKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp SCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred CCCcceecHHHHhcCCCCcEEEEEe
Confidence 1111223567778899999988654
No 401
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=27.91 E-value=1.6e+02 Score=27.93 Aligned_cols=90 Identities=20% Similarity=0.192 Sum_probs=50.2
Q ss_pred CEEEEECCCC--chHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEeccccccccc
Q 012961 217 RNVLDVGCGV--ASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ 294 (452)
Q Consensus 217 ~~VLDIGCG~--G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~~ 294 (452)
.+|.=||+|. +.++..|..... ..++...|.++..++.+.+.|..... ..+..++ .-...|+|+.+- - ..
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~-~~~V~~~dr~~~~~~~a~~~G~~~~~-~~~~~~~--~~~~aDvVilav--p--~~ 105 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGF-KGKIYGYDINPESISKAVDLGIIDEG-TTSIAKV--EDFSPDFVMLSS--P--VR 105 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTC-CSEEEEECSCHHHHHHHHHTTSCSEE-ESCTTGG--GGGCCSEEEECS--C--GG
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHCCCcchh-cCCHHHH--hhccCCEEEEeC--C--HH
Confidence 4788899874 244555555421 11444455566666667666642221 1222220 113579998543 1 12
Q ss_pred cHHHHHHHHHHhcCCCcEEE
Q 012961 295 RDGILLLELDRLLRPGGYFV 314 (452)
Q Consensus 295 d~~~~L~ei~RvLkPGG~lv 314 (452)
....++.++...|++|..++
T Consensus 106 ~~~~vl~~l~~~l~~~~iv~ 125 (314)
T 3ggo_A 106 TFREIAKKLSYILSEDATVT 125 (314)
T ss_dssp GHHHHHHHHHHHSCTTCEEE
T ss_pred HHHHHHHHHhhccCCCcEEE
Confidence 23567889999999987655
No 402
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=27.26 E-value=38 Score=33.07 Aligned_cols=88 Identities=14% Similarity=0.134 Sum_probs=49.3
Q ss_pred CCCEEEEECC-C-CchHHHHHhhC---CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCC-----CCCCceEEE
Q 012961 215 NIRNVLDVGC-G-VASFGAYLLSH---DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPY-----PSRSFELAH 284 (452)
Q Consensus 215 ~~~~VLDIGC-G-~G~~~~~La~~---~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~-----~d~sFDlVv 284 (452)
+..+||=+|+ | .|.++..++.. .|++++ +....+.+++.|....+ |.....+ ....+|+|+
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~------~~~~~~~~~~lGa~~v~---~~~~~~~~~~~~~~~g~D~vi 253 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC------SQDASELVRKLGADDVI---DYKSGSVEEQLKSLKPFDFIL 253 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE------CGGGHHHHHHTTCSEEE---ETTSSCHHHHHHTSCCBSEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe------ChHHHHHHHHcCCCEEE---ECCchHHHHHHhhcCCCCEEE
Confidence 4468999993 3 56666666652 333332 22334566666644322 2111111 114699998
Q ss_pred eccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 285 CSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 285 ~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
-... .....+....++|++||.+++..
T Consensus 254 d~~g------~~~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 254 DNVG------GSTETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp ESSC------TTHHHHGGGGBCSSSCCEEEESC
T ss_pred ECCC------ChhhhhHHHHHhhcCCcEEEEeC
Confidence 5432 11134577788999999998755
No 403
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=26.87 E-value=1.9e+02 Score=26.24 Aligned_cols=104 Identities=14% Similarity=0.117 Sum_probs=55.3
Q ss_pred CCCEEEEECCCCch---HHHHHhhC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC-----CC-----CCC
Q 012961 215 NIRNVLDVGCGVAS---FGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP-----YP-----SRS 279 (452)
Q Consensus 215 ~~~~VLDIGCG~G~---~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp-----~~-----d~s 279 (452)
..+++|=.|++.|. ++..|++. .|+.++.......+...+...+.+.++.+...|..+.. +. -+.
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 96 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGH 96 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 45689989977652 34444443 33333332222222223333445667788888865532 00 136
Q ss_pred ceEEEecccccccc-------ccH-----------HHHHHHHHHhcCCCcEEEEEeC
Q 012961 280 FELAHCSRCRIDWL-------QRD-----------GILLLELDRLLRPGGYFVYSSP 318 (452)
Q Consensus 280 FDlVv~s~~~l~~~-------~d~-----------~~~L~ei~RvLkPGG~lvi~~p 318 (452)
.|+++.+....... ++. -.+.+.+.+.++.+|.+++...
T Consensus 97 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 153 (270)
T 3is3_A 97 LDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSS 153 (270)
T ss_dssp CCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 89988654322211 011 1155677788888998887654
No 404
>1whz_A Hypothetical protein; alpha and beta protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.52A {Thermus thermophilus} SCOP: d.50.3.2
Probab=26.08 E-value=86 Score=22.81 Aligned_cols=28 Identities=11% Similarity=0.137 Sum_probs=22.4
Q ss_pred HHHHHHHHHhCCCEEEEEEeceeEeecc
Q 012961 331 WNAMYDLLKSMCWKIVSKKDQTVIWAKP 358 (452)
Q Consensus 331 ~~~l~~ll~~~Gf~~v~~~~~~~iw~kp 358 (452)
+.++..++++.||..+.....-.+|.+|
T Consensus 7 ~~elik~L~~~G~~~~r~~GSH~~~~~~ 34 (70)
T 1whz_A 7 PEEVARKLRRLGFVERMAKGGHRLYTHP 34 (70)
T ss_dssp HHHHHHHHHHTTCEEEEEETTEEEEECT
T ss_pred HHHHHHHHHHCCCEEeCCCCCCceEecC
Confidence 5789999999999988776666677554
No 405
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=25.61 E-value=1.7e+02 Score=26.86 Aligned_cols=103 Identities=8% Similarity=-0.022 Sum_probs=54.5
Q ss_pred CCCEEEEECCCCc---hHHHHHhhC--CCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCC-----CC-----CCC
Q 012961 215 NIRNVLDVGCGVA---SFGAYLLSH--DIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLP-----YP-----SRS 279 (452)
Q Consensus 215 ~~~~VLDIGCG~G---~~~~~La~~--~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp-----~~-----d~s 279 (452)
..+++|=.|++.| .++..|++. .|+.++.......+...+...+.+..+.+...|..+.. +. -+.
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 109 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGG 109 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3458999998766 244445543 33333332222222222333344667777877765432 00 136
Q ss_pred ceEEEecccccccc-------ccH-----------HHHHHHHHHhcCCCcEEEEEe
Q 012961 280 FELAHCSRCRIDWL-------QRD-----------GILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 280 FDlVv~s~~~l~~~-------~d~-----------~~~L~ei~RvLkPGG~lvi~~ 317 (452)
.|+++.+....... ++. -.+++.+.+.++.+|.+++..
T Consensus 110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~is 165 (271)
T 3v2g_A 110 LDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIG 165 (271)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 89988654322110 011 115667777888888888764
No 406
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=24.23 E-value=5e+02 Score=27.82 Aligned_cols=46 Identities=9% Similarity=0.075 Sum_probs=26.8
Q ss_pred HHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEEE
Q 012961 301 LELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVSK 348 (452)
Q Consensus 301 ~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~~ 348 (452)
.++.+.+||--+++=-++... .......|+.+...+..+||.+...
T Consensus 417 ~riv~~~rPk~fvlENV~gll--s~~~g~~~~~il~~l~~lGY~v~~~ 462 (784)
T 4ft4_B 417 MDIVAYLKPKYVLMENVVDIL--KFADGYLGKYALSCLVAMKYQARLG 462 (784)
T ss_dssp HHHHHHHCCSEEEEEEEGGGG--TGGGGHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHCCCEEEEEecCCcc--ccccchHHHHHHHHHHhCCCeeeee
Confidence 345556788654442222221 1123346788888999999986544
No 407
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=24.00 E-value=42 Score=32.37 Aligned_cols=65 Identities=12% Similarity=0.117 Sum_probs=38.1
Q ss_pred CCceEEEecc----cccccc--ccH----HHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEEE
Q 012961 278 RSFELAHCSR----CRIDWL--QRD----GILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIVS 347 (452)
Q Consensus 278 ~sFDlVv~s~----~~l~~~--~d~----~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v~ 347 (452)
+.+|+|++.. ..++|. .|. ..++.-..++|+|||.|++-.-.. .. +..+++...+++ .|+.+.
T Consensus 205 ~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~Kvygg---aD---r~se~lv~~LaR-~F~~Vr 277 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGY---AD---RASESIIGAIAR-QFKFSR 277 (320)
T ss_dssp CCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCC---CS---HHHHHHHHHHHT-TEEEEE
T ss_pred CcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEecC---Cc---ccHHHHHHHHHH-hcceee
Confidence 6699999842 122223 332 226778889999999999876322 11 112455555554 466554
Q ss_pred EE
Q 012961 348 KK 349 (452)
Q Consensus 348 ~~ 349 (452)
..
T Consensus 278 ~v 279 (320)
T 2hwk_A 278 VC 279 (320)
T ss_dssp EE
T ss_pred ee
Confidence 43
No 408
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=23.82 E-value=26 Score=33.43 Aligned_cols=41 Identities=24% Similarity=0.328 Sum_probs=27.2
Q ss_pred CCceEEEeccc---ccccc---ccH----HHHHHHHHHhcCCCcEEEEEeC
Q 012961 278 RSFELAHCSRC---RIDWL---QRD----GILLLELDRLLRPGGYFVYSSP 318 (452)
Q Consensus 278 ~sFDlVv~s~~---~l~~~---~d~----~~~L~ei~RvLkPGG~lvi~~p 318 (452)
+.||+|+++.. ..||. +|- ..+-....+.|+|||.+++..-
T Consensus 210 grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aY 260 (324)
T 3trk_A 210 GRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAY 260 (324)
T ss_dssp CCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEEC
T ss_pred CceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEee
Confidence 78999998531 12332 222 2255667789999999999763
No 409
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=22.37 E-value=84 Score=33.14 Aligned_cols=63 Identities=16% Similarity=0.143 Sum_probs=36.2
Q ss_pred CCCceEEEeccc---ccccc---ccH----HHHHHHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCE
Q 012961 277 SRSFELAHCSRC---RIDWL---QRD----GILLLELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWK 344 (452)
Q Consensus 277 d~sFDlVv~s~~---~l~~~---~d~----~~~L~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~ 344 (452)
.+.||+|+++.. ..||. +|. ..+-....+.|+|||.+++..-+ +... ..-.-+..++++..+.
T Consensus 219 ~~ryDlvfvn~~t~yr~HHyqQCeDHa~~l~ml~~~al~~l~pGGt~v~~~YG---yADr--~sE~vv~alaRkF~~~ 291 (670)
T 4gua_A 219 QARYDLVFINIGTKYRNHHFQQCEDHAATLKTLSRSALNCLNPGGTLVVKSYG---YADR--NSEDVVTALARKFVRV 291 (670)
T ss_dssp CCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESC---CCSH--HHHHHHHHHHHTEEEE
T ss_pred CCcccEEEEecCCCcccchHHHHHHHHHHHHHHhHHHHhhcCCCceEEEEEee---cccc--chHHHHHHHHhheeee
Confidence 468999998532 12332 222 22556778999999999997632 2221 1112355666664443
No 410
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=21.68 E-value=2.1e+02 Score=24.21 Aligned_cols=91 Identities=13% Similarity=0.011 Sum_probs=45.6
Q ss_pred CCEEEEECCCC-ch-HHHHHhh---CCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCC----CC-CCCCceEEEe
Q 012961 216 IRNVLDVGCGV-AS-FGAYLLS---HDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRL----PY-PSRSFELAHC 285 (452)
Q Consensus 216 ~~~VLDIGCG~-G~-~~~~La~---~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~l----p~-~d~sFDlVv~ 285 (452)
..+|+=+|+|. |. ++..|.+ ..|+++| .++...+.+++.+.. +..+|..+. .. .-..+|+|+.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid-----~~~~~~~~~~~~g~~--~~~gd~~~~~~l~~~~~~~~ad~vi~ 111 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIE-----IREEAAQQHRSEGRN--VISGDATDPDFWERILDTGHVKLVLL 111 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEE-----SCHHHHHHHHHTTCC--EEECCTTCHHHHHTBCSCCCCCEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEE-----CCHHHHHHHHHCCCC--EEEcCCCCHHHHHhccCCCCCCEEEE
Confidence 34688888863 32 2223322 2344444 444444555555543 444554321 11 1246899886
Q ss_pred ccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 286 SRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 286 s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
... . ......+....+.+.|++.++...
T Consensus 112 ~~~--~--~~~~~~~~~~~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 112 AMP--H--HQGNQTALEQLQRRNYKGQIAAIA 139 (183)
T ss_dssp CCS--S--HHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred eCC--C--hHHHHHHHHHHHHHCCCCEEEEEE
Confidence 431 1 111223445666777888887654
No 411
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=21.41 E-value=40 Score=27.05 Aligned_cols=54 Identities=7% Similarity=0.022 Sum_probs=35.5
Q ss_pred EEEEECCCCchHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEecc
Q 012961 218 NVLDVGCGVASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSR 287 (452)
Q Consensus 218 ~VLDIGCG~G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~ 287 (452)
+|| +-||.|.-+..+++ .+.+.+.++|.++.+...+..++.-....+|+|+...
T Consensus 5 kIl-l~Cg~G~sTS~l~~---------------k~~~~~~~~gi~~~i~a~~~~~~~~~~~~~Dvil~~p 58 (106)
T 1e2b_A 5 HIY-LFSSAGMSTSLLVS---------------KMRAQAEKYEVPVIIEAFPETLAGEKGQNADVVLLGP 58 (106)
T ss_dssp EEE-EECSSSTTTHHHHH---------------HHHHHHHHSCCSEEEEEECSSSTTHHHHHCSEEEECT
T ss_pred EEE-EECCCchhHHHHHH---------------HHHHHHHHCCCCeEEEEecHHHHHhhccCCCEEEEcc
Confidence 455 55888865443332 3446778889998888877766642224589998654
No 412
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=21.37 E-value=2.8e+02 Score=27.88 Aligned_cols=94 Identities=16% Similarity=0.258 Sum_probs=47.8
Q ss_pred CCCEEEEECCCC-c-hHHHHHhhC--CCccccCChhhhhHHHHHHH------HHcC---------CCeEEEEecCCCCCC
Q 012961 215 NIRNVLDVGCGV-A-SFGAYLLSH--DIIAMSLAPNDVHENQIQFA------LERG---------IPSTLGVLGTKRLPY 275 (452)
Q Consensus 215 ~~~~VLDIGCG~-G-~~~~~La~~--~v~~vdis~~dis~~~~~~A------~~rg---------~~~~~~~~d~~~lp~ 275 (452)
...+|.=||+|. | .++..++.. .|+.+|.++..+........ .+++ ....+ ..+.+.+
T Consensus 36 ~~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~~~-- 112 (463)
T 1zcj_A 36 PVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTKEL-- 112 (463)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCGGGG--
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCHHHH--
Confidence 345799999986 3 355555554 45555555443322211100 0011 01122 2222211
Q ss_pred CCCCceEEEeccccccccccHHHHHHHHHHhcCCCcEEEE
Q 012961 276 PSRSFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVY 315 (452)
Q Consensus 276 ~d~sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi 315 (452)
...|+|+..- .+-..-...++.++...++|+..++.
T Consensus 113 --~~aDlVIeaV--pe~~~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 113 --STVDLVVEAV--FEDMNLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp --TTCSEEEECC--CSCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred --CCCCEEEEcC--CCCHHHHHHHHHHHHhhCCCCeEEEe
Confidence 3579998543 22111125588889999998877664
No 413
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=21.24 E-value=69 Score=33.08 Aligned_cols=89 Identities=11% Similarity=0.093 Sum_probs=46.6
Q ss_pred CCCEEEEECCCC-chHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEecccccccc
Q 012961 215 NIRNVLDVGCGV-ASFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWL 293 (452)
Q Consensus 215 ~~~~VLDIGCG~-G~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~ 293 (452)
.+.+|+=+|+|. |.....++.. .++.+...+.++...+.|.+.|.. + .+..++ . ...|+|+.....-+.
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka--~Ga~Viv~d~~~~~~~~A~~~Ga~--~--~~l~e~-l--~~aDvVi~atgt~~~- 342 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKG--QGARVSVTEIDPINALQAMMEGFD--V--VTVEEA-I--GDADIVVTATGNKDI- 342 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH--TTCEEEEECSCHHHHHHHHHTTCE--E--CCHHHH-G--GGCSEEEECSSSSCS-
T ss_pred CcCEEEEEccCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHcCCE--E--ecHHHH-H--hCCCEEEECCCCHHH-
Confidence 345899999863 3322222221 123333444445444556665542 1 222221 1 358999865322221
Q ss_pred ccHHHHHHHHHHhcCCCcEEEEEeC
Q 012961 294 QRDGILLLELDRLLRPGGYFVYSSP 318 (452)
Q Consensus 294 ~d~~~~L~ei~RvLkPGG~lvi~~p 318 (452)
+-.+..+.+|+||+++....
T Consensus 343 -----i~~~~l~~mk~ggilvnvG~ 362 (494)
T 3ce6_A 343 -----IMLEHIKAMKDHAILGNIGH 362 (494)
T ss_dssp -----BCHHHHHHSCTTCEEEECSS
T ss_pred -----HHHHHHHhcCCCcEEEEeCC
Confidence 11356677999999987653
No 414
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=21.18 E-value=3.9e+02 Score=24.72 Aligned_cols=112 Identities=14% Similarity=0.088 Sum_probs=55.4
Q ss_pred CEEEEECCCC-c-hHHHHHhhCCCccccCChhhhhHHHHHHHHHcCCCeEEEEecCCCCCCCCCCceEEEeccccccccc
Q 012961 217 RNVLDVGCGV-A-SFGAYLLSHDIIAMSLAPNDVHENQIQFALERGIPSTLGVLGTKRLPYPSRSFELAHCSRCRIDWLQ 294 (452)
Q Consensus 217 ~~VLDIGCG~-G-~~~~~La~~~v~~vdis~~dis~~~~~~A~~rg~~~~~~~~d~~~lp~~d~sFDlVv~s~~~l~~~~ 294 (452)
.+|.=||+|. | .++..|++. +.++...|.++...+...+.+... ...+..+.- ...|+|+..- .-..
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~---G~~V~~~dr~~~~~~~~~~~g~~~--~~~~~~e~~---~~aDvvi~~v---p~~~ 76 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRA---GLSTWGADLNPQACANLLAEGACG--AAASAREFA---GVVDALVILV---VNAA 76 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT---TCEEEEECSCHHHHHHHHHTTCSE--EESSSTTTT---TTCSEEEECC---SSHH
T ss_pred CeEEEECCCHHHHHHHHHHHHC---CCeEEEEECCHHHHHHHHHcCCcc--ccCCHHHHH---hcCCEEEEEC---CCHH
Confidence 4688888874 2 234444443 233333445555555555555422 122333221 3579988643 1111
Q ss_pred cHHHHH---HHHHHhcCCCcEEEEEeCCCCCCChhhHHHHHHHHHHHHhCCCEEE
Q 012961 295 RDGILL---LELDRLLRPGGYFVYSSPEAYAHDPENRRIWNAMYDLLKSMCWKIV 346 (452)
Q Consensus 295 d~~~~L---~ei~RvLkPGG~lvi~~p~~~~~~~~~~~~~~~l~~ll~~~Gf~~v 346 (452)
....++ +++...|++|..++-.... .+ ..-..+.+.+.+.|...+
T Consensus 77 ~~~~v~~~~~~l~~~l~~g~ivv~~st~----~~---~~~~~~~~~~~~~g~~~~ 124 (303)
T 3g0o_A 77 QVRQVLFGEDGVAHLMKPGSAVMVSSTI----SS---ADAQEIAAALTALNLNML 124 (303)
T ss_dssp HHHHHHC--CCCGGGSCTTCEEEECSCC----CH---HHHHHHHHHHHTTTCEEE
T ss_pred HHHHHHhChhhHHhhCCCCCEEEecCCC----CH---HHHHHHHHHHHHcCCeEE
Confidence 223344 5566778888776643311 11 223455566666666544
No 415
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=20.69 E-value=56 Score=31.42 Aligned_cols=31 Identities=6% Similarity=-0.036 Sum_probs=23.1
Q ss_pred CceEEEeccccccccccHHHHHHHHHHhcCCCcEEEEEe
Q 012961 279 SFELAHCSRCRIDWLQRDGILLLELDRLLRPGGYFVYSS 317 (452)
Q Consensus 279 sFDlVv~s~~~l~~~~d~~~~L~ei~RvLkPGG~lvi~~ 317 (452)
.+|+|+-... ...+..+.++|++||.+++..
T Consensus 233 g~D~vid~~g--------~~~~~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 233 QPRIFLDAVT--------GPLASAIFNAMPKRARWIIYG 263 (349)
T ss_dssp CCCEEEESSC--------HHHHHHHHHHSCTTCEEEECC
T ss_pred CCcEEEECCC--------ChhHHHHHhhhcCCCEEEEEe
Confidence 6999985432 123577889999999999865
Done!